If more than 50 genes/sequences are provided as input, then the associated running time can take some time. Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes. After processing you will be send an email with a link to the created phylogenetic tree.
The selection modi are exclusive: please choose either Gene selection or Species selection.
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000499', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1066', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p29780' => 'bna', 'A02p33180' => 'bna', 'A03p16470' => 'bna', 'A03p66010' => 'bna', 'A04p25970' => 'bna', 'A06p01270' => 'bna', 'A06p46080' => 'bna', 'A07p11400' => 'bna', 'A08p01840' => 'bna', 'A08p08230' => 'bna', 'A08p25740' => 'bna', 'A09p32070' => 'bna', 'A09p37830' => 'bna', 'A09p42840' => 'bna', 'A09p42850' => 'bna', 'Aa31LG10G2060' => 'aar', 'Aa31LG2G7410' => 'aar', 'Aa31LG6G10200' => 'aar', 'Aa31LG6G16680' => 'aar', 'Aa31LG6G8470' => 'aar', 'Aa31LG9G12730' => 'aar', 'Aa31LG9G13680' => 'aar', 'Aa31LG9G14920' => 'aar', 'Aa31LG9G6650' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4977' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5467' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3254' => 'aag', 'Actinidia02578' => 'ach', 'Actinidia07693' => 'ach', 'Actinidia08413' => 'ach', 'Actinidia08414' => 'ach', 'Actinidia15289' => 'ach', 'Actinidia19871' => 'ach', 'Actinidia21475' => 'ach', 'Actinidia22576' => 'ach', 'Actinidia28327' => 'ach', 'Actinidia32491' => 'ach', 'Actinidia39463' => 'ach', 'Actinidia39571' => 'ach', 'Ah.01g013750' => 'amhyb', 'Ah.01g023210' => 'amhyb', 'Ah.04g164850' => 'amhyb', 'Ah.05g178060' => 'amhyb', 'Ah.07g204270' => 'amhyb', 'Ah.07g208480' => 'amhyb', 'Ah.09g237410' => 'amhyb', 'Ah.14g089460' => 'amhyb', 'AL1G41790' => 'aly', 'AL1G49050' => 'aly', 'AL1G53810' => 'aly', 'AL1G61400' => 'aly', 'AL4G18580' => 'aly', 'AL5G12510' => 'aly', 'AL5G12540' => 'aly', 'AL6G43230' => 'aly', 'AL7G10370' => 'aly', 'AL7G19250' => 'aly', 'AL8G12240' => 'aly', 'AL8G18540' => 'aly', 'Aqoxy1G02409' => 'aox', 'Aqoxy2G03993' => 'aox', 'Aqoxy3G03357' => 'aox', 'Aqoxy4G00785' => 'aox', 'Aqoxy5G02598' => 'aox', 'Aqoxy6G00132' => 'aox', 'Aqoxy7G01776' => 'aox', 'Aqoxy7G02316' => 'aox', 'Aqoxy7G03973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.12AFKW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B8730' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27IQR1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3F75VG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3RE0GA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41TCQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.527VTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FIR39' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5W8UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DA38EV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ63HS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H1I32C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HC27T5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4M8AP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7N3CZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9UVDZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LS1NQA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT1D4B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SKC4TM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCFV76' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF9Q1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQWD9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1ZM88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WE07RT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YCK7VH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJE6Q6' => 'arhy', 'AT1G28240' => 'ath', 'AT1G34550' => 'ath', 'AT1G53040' => 'ath', 'AT2G02910' => 'ath', 'AT4G09630' => 'ath', 'AT4G38500' => 'ath', 'AT5G42660' => 'ath', 'AT5G46220' => 'ath', 'ATR0152G026' => 'atr', 'ATR0564G343' => 'atr', 'ATR0706G151' => 'atr', 'ATR0733G207' => 'atr', 'ATR0751G234' => 'atr', 'ATR0807G048' => 'atr', 'ATR1091G084' => 'atr', 'Atru.chr10.1229' => 'acertr', 'Atru.chr10.1230' => 'acertr', 'Atru.chr10.1874' => 'acertr', 'Atru.chr11.1808' => 'acertr', 'Atru.chr13.1795' => 'acertr', 'Atru.chr13.570' => 'acertr', 'Atru.chr2.2608' => 'acertr', 'Atru.chr2.2609' => 'acertr', 'Atru.chr5.3428' => 'acertr', 'Atru.chr8.1171' => 'acertr', 'AUR62004651' => 'cqu', 'AUR62008675' => 'cqu', 'AUR62010014' => 'cqu', 'AUR62013004' => 'cqu', 'AUR62014825' => 'cqu', 'AUR62015015' => 'cqu', 'AUR62015151' => 'cqu', 'AUR62017020' => 'cqu', 'AUR62019422' => 'cqu', 'AUR62023570' => 'cqu', 'AUR62025571' => 'cqu', 'AUR62029098' => 'cqu', 'AUR62033863' => 'cqu', 'AUR62034296' => 'cqu', 'AUR62040075' => 'cqu', 'BcaB02g07334' => 'bca', 'BcaB02g10575' => 'bca', 'BcaB03g12119' => 'bca', 'BcaB03g12120' => 'bca', 'BcaB03g13945' => 'bca', 'BcaB04g17123' => 'bca', 'BcaB04g17867' => 'bca', 'BcaB04g19839' => 'bca', 'BcaB07g30317' => 'bca', 'BcaB07g32432' => 'bca', 'BcaB07g33362' => 'bca', 'BcaB08g36611' => 'bca', 'BcaC01g00028' => 'bca', 'BcaC01g01356' => 'bca', 'BcaC01g02034' => 'bca', 'BcaC01g06051' => 'bca', 'BcaC03g16839' => 'bca', 'BcaC03g17176' => 'bca', 'BcaC05g26829' => 'bca', 'BcaC06g31490' => 'bca', 'BcaC06g35344' => 'bca', 'BcaC06g36570' => 'bca', 'BcaC07g37537' => 'bca', 'BcaC08g43491' => 'bca', 'BcaC08g43773' => 'bca', 'BcaNung00234' => 'bca', 'BcaNung01982' => 'bca', 'BcaNung03707' => 'bca', 'BcaNung06454' => 'bca', 'BolC2t10762H' => 'bol', 'BolC2t11191H' => 'bol', 'BolC3t14322H' => 'bol', 'BolC3t19747H' => 'bol', 'BolC3t21425H' => 'bol', 'BolC4t27800H' => 'bol', 'BolC5t31423H' => 'bol', 'BolC6t35951H' => 'bol', 'BolC6t36282H' => 'bol', 'BolC7t40678H' => 'bol', 'BolC7t40679H' => 'bol', 'BolC7t42222H' => 'bol', 'BolC7t43492H' => 'bol', 'BolC7t46785H' => 'bol', 'BolC8t47853H' => 'bol', 'BolC9t56805H' => 'bol', 'BraA02t08000Z' => 'bra', 'BraA02t08341Z' => 'bra', 'BraA03t10936Z' => 'bra', 'BraA03t15657Z' => 'bra', 'BraA04t18100Z' => 'bra', 'BraA05t20523Z' => 'bra', 'BraA06t23353Z' => 'bra', 'BraA06t27473Z' => 'bra', 'BraA06t27769Z' => 'bra', 'BraA07t28928Z' => 'bra', 'BraA08t32236Z' => 'bra', 'BraA08t32841Z' => 'bra', 'BraA08t34524Z' => 'bra', 'BraA09t38742Z' => 'bra', 'BraA09t39295Z' => 'bra', 'C02p47180' => 'bna', 'C02p50990' => 'bna', 'C03p19360' => 'bna', 'C03p74950' => 'bna', 'C03p91000' => 'bna', 'C04p63260' => 'bna', 'C05p27050' => 'bna', 'C06p08750' => 'bna', 'C06p11490' => 'bna', 'C07p02820' => 'bna', 'C07p17180' => 'bna', 'C07p29440' => 'bna', 'C07p63730' => 'bna', 'C09p39260' => 'bna', 'CAN.G1164.34' => 'can', 'CAN.G1164.39' => 'can', 'CAN.G1530.3' => 'can', 'CAN.G162.61' => 'can', 'CAN.G176.6' => 'can', 'CAN.G289.49' => 'can', 'CAN.G370.21' => 'can', 'CAN.G370.22' => 'can', 'CAN.G371.117' => 'can', 'CAN.G58.37' => 'can', 'CAN.G588.98' => 'can', 'CANSAT21G2266' => 'cansat', 'CANSAT25G2799' => 'cansat', 'CANSAT35G0862' => 'cansat', 'CANSAT35G1704' => 'cansat', 'CANSAT35G1760' => 'cansat', 'CANSAT56G3971' => 'cansat', 'CANSAT56G4116' => 'cansat', 'CANSAT80G1259' => 'cansat', 'CARHR027730' => 'chi', 'CARHR033880' => 'chi', 'CARHR043270' => 'chi', 'CARHR145330' => 'chi', 'CARHR145340' => 'chi', 'CARHR175570' => 'chi', 'CARHR181570' => 'chi', 'CARHR258470' => 'chi', 'CARHR260490' => 'chi', 'CARHR294220' => 'chi', 'Carub.0001s2668' => 'cru', 'Carub.0001s3257' => 'cru', 'Carub.0001s4220' => 'cru', 'Carub.0005s0179' => 'cru', 'Carub.0006s2807' => 'cru', 'Carub.0007s0039' => 'cru', 'Carub.0008s0169' => 'cru', 'Carub.0008s0636' => 'cru', 'Ca_00338_v3' => 'car', 'Ca_00542_v3' => 'car', 'Ca_01844_v3' => 'car', 'Ca_10611_v3' => 'car', 'Ca_13326_v3' => 'car', 'Ca_17944_v3' => 'car', 'Ca_18546_v3' => 'car', 'Ca_24219_v3' => 'car', 'Ca_29972_v3' => 'car', 'CBR_g3681' => 'cbr', 'CBR_g40021' => 'cbr', 'Cc01_g08140' => 'ccan', 'Cc02_g13410' => 'ccan', 'Cc02_g37480' => 'ccan', 'Cc05_g12030' => 'ccan', 'Cc09_g03370' => 'ccan', 'Cc09_g10300' => 'ccan', 'Cc10_g03530' => 'ccan', 'Cc10_g11380' => 'ccan', 'CDE01G0176' => 'cde', 'CDE02G0675' => 'cde', 'CDE02G0942' => 'cde', 'CDE02G1153' => 'cde', 'CDE02G4177' => 'cde', 'CDE04G2117' => 'cde', 'CDE04G2736' => 'cde', 'CDE08G1161' => 'cde', 'CDE09G1238' => 'cde', 'Cfa000467' => 'cfa', 'Cfa000947' => 'cfa', 'Cfa004969' => 'cfa', 'Cfa005284' => 'cfa', 'Cfa008993' => 'cfa', 'Cfa018187' => 'cfa', 'Cfa018454' => 'cfa', 'Cfa020585' => 'cfa', 'Ciclev10000424m.g' => 'ccl', 'Ciclev10003605m.g' => 'ccl', 'Ciclev10007828m.g' => 'ccl', 'Ciclev10014620m.g' => 'ccl', 'Ciclev10015169m.g' => 'ccl', 'Ciclev10018291m.g' => 'ccl', 'Ciclev10028256m.g' => 'ccl', 'Ciclev10033822m.g' => 'ccl', 'CiPaw.05G060300' => 'cil', 'CiPaw.05G085000' => 'cil', 'CiPaw.06G083700' => 'cil', 'CiPaw.06G120300' => 'cil', 'CiPaw.09G060500' => 'cil', 'CiPaw.09G123800' => 'cil', 'CiPaw.11G169700' => 'cil', 'CiPaw.12G118300' => 'cil', 'CiPaw.15G071000' => 'cil', 'CiPaw.15G081900' => 'cil', 'ClCG01G024610' => 'cla', 'ClCG03G006070' => 'cla', 'ClCG05G019250' => 'cla', 'ClCG09G009500' => 'cla', 'ClCG11G008200' => 'cla', 'ClCG11G018080' => 'cla', 'COL.COLO4_17373' => 'col', 'COL.COLO4_22994' => 'col', 'COL.COLO4_26389' => 'col', 'COL.COLO4_27170' => 'col', 'COL.COLO4_31074' => 'col', 'COL.COLO4_31465' => 'col', 'COL.COLO4_36438' => 'col', 'COL.COLO4_36439' => 'col', 'Cpa.g.c38781' => 'cpa', 'Cpa.g.sc128.12' => 'cpa', 'Cpa.g.sc166.7' => 'cpa', 'Cpa.g.sc166.8' => 'cpa', 'Cpa.g.sc20.111' => 'cpa', 'Cpa.g.sc27.31' => 'cpa', 'Cpa.g.sc64.36' => 'cpa', 'Cpa.g.sc64.37' => 'cpa', 'Cpa.g.sc66.49' => 'cpa', 'Cpa.g.sc80.64' => 'cpa', 'CsaV3_1G012320' => 'csa', 'CsaV3_2G008480' => 'csa', 'CsaV3_2G033450' => 'csa', 'CsaV3_3G044830' => 'csa', 'CsaV3_4G033710' => 'csa', 'CsaV3_6G051730' => 'csa', 'CsaV3_7G025350' => 'csa', 'CSS0001067' => 'camsi', 'CSS0005996' => 'camsi', 'CSS0006590' => 'camsi', 'CSS0009673' => 'camsi', 'CSS0010201' => 'camsi', 'CSS0010549' => 'camsi', 'CSS0011364' => 'camsi', 'CSS0014473' => 'camsi', 'CSS0014961' => 'camsi', 'CSS0020191' => 'camsi', 'CSS0021165' => 'camsi', 'CSS0022306' => 'camsi', 'CSS0030591' => 'camsi', 'CSS0030696' => 'camsi', 'CSS0032653' => 'camsi', 'CSS0037487' => 'camsi', 'CSS0041102' => 'camsi', 'CSS0041261' => 'camsi', 'CSS0046246' => 'camsi', 'CSS0049256' => 'camsi', 'DCAR_004075' => 'dca', 'DCAR_011538' => 'dca', 'DCAR_019553' => 'dca', 'DCAR_020952' => 'dca', 'DCAR_021739' => 'dca', 'DCAR_027407' => 'dca', 'DCAR_027913' => 'dca', 'DCAR_028066' => 'dca', 'Dinv05899' => 'din', 'Dinv07563' => 'din', 'Dinv08010' => 'din', 'Dinv14125' => 'din', 'Dinv20172' => 'din', 'Dinv30743' => 'din', 'Dinv31229' => 'din', 'Dinv34162' => 'din', 'Dinv36028' => 'din', 'Dinv39368' => 'din', 'Dinv40565' => 'din', 'Dinv41706' => 'din', 'Duzib052G0089' => 'dzi', 'Duzib116G0641' => 'dzi', 'Duzib132G0069' => 'dzi', 'Duzib132G1219' => 'dzi', 'Duzib147G0278' => 'dzi', 'Duzib160G0480' => 'dzi', 'Duzib170G0661' => 'dzi', 'Duzib177G0591' => 'dzi', 'Duzib187G1353' => 'dzi', 'Duzib192G0858' => 'dzi', 'Duzib192G0883' => 'dzi', 'Duzib213G0506' => 'dzi', 'Duzib235G0289' => 'dzi', 'Duzib251G0422' => 'dzi', 'ECA232G3898' => 'eca', 'ECA233G5950' => 'eca', 'ECA234G1699' => 'eca', 'ECA234G2421' => 'eca', 'ECA236G0426' => 'eca', 'ECA236G4331' => 'eca', 'ECA248G2573' => 'eca', 'EL10Ac1g00077' => 'bvu', 'EL10Ac1g01746' => 'bvu', 'EL10Ac2g03464' => 'bvu', 'EL10Ac4g08176' => 'bvu', 'EL10Ac7g17521' => 'bvu', 'EL10Ac8g20386' => 'bvu', 'EL10Ac9g21343' => 'bvu', 'EL10Ac9g22688' => 'bvu', 'Eucgr.B03434' => 'egr', 'Eucgr.D00618' => 'egr', 'Eucgr.E02395' => 'egr', 'Eucgr.F01129' => 'egr', 'Eucgr.F02622' => 'egr', 'Eucgr.F04207' => 'egr', 'FAN01G0570' => 'fan', 'FAN03G3351' => 'fan', 'FAN06G3702' => 'fan', 'FAN07G2149' => 'fan', 'FAN10G3758' => 'fan', 'FAN11G1170' => 'fan', 'FAN11G2050' => 'fan', 'FAN11G2724' => 'fan', 'FAN12G1700' => 'fan', 'FAN12G2028' => 'fan', 'FAN15G1160' => 'fan', 'FAN15G3063' => 'fan', 'FAN16G2540' => 'fan', 'FAN16G3077' => 'fan', 'FAN16G3624' => 'fan', 'FAN17G0221' => 'fan', 'FAN20G2492' => 'fan', 'FAN20G2905' => 'fan', 'FAN21G0548' => 'fan', 'FAN21G1300' => 'fan', 'FAN22G0077' => 'fan', 'FAN22G1315' => 'fan', 'FAN24G1280' => 'fan', 'FAN24G1445' => 'fan', 'FAN24G3527' => 'fan', 'FAN25G0464' => 'fan', 'FAN25G2885' => 'fan', 'FAN25G3270' => 'fan', 'FAN27G1101' => 'fan', 'FAN27G2846' => 'fan', 'FAN27G3524' => 'fan', 'FvH4_2g11770' => 'fve', 'FvH4_2g15630' => 'fve', 'FvH4_3g05570' => 'fve', 'FvH4_3g09110' => 'fve', 'FvH4_3g19940' => 'fve', 'FvH4_4g04821' => 'fve', 'FvH4_4g31480' => 'fve', 'FvH4_7g01740' => 'fve', 'Glyma.05G130400' => 'gma', 'Glyma.05G156400' => 'gma', 'Glyma.07G197000' => 'gma', 'Glyma.08G085151' => 'gma', 'Glyma.08G114500' => 'gma', 'Glyma.08G300400' => 'gma', 'Glyma.10G215800' => 'gma', 'Glyma.12G224400' => 'gma', 'Glyma.13G179300' => 'gma', 'Glyma.13G218151' => 'gma', 'Glyma.13G238800' => 'gma', 'Glyma.13G276900' => 'gma', 'Glyma.14G078200' => 'gma', 'Glyma.15G074500' => 'gma', 'Glyma.15G094100' => 'gma', 'Glyma.17G247200' => 'gma', 'Glyma.18G120100' => 'gma', 'Glyma.20G176000' => 'gma', 'Gohir.A01G063600' => 'ghi', 'Gohir.A01G170301' => 'ghi', 'Gohir.A02G060500' => 'ghi', 'Gohir.A05G133850' => 'ghi', 'Gohir.A05G161400' => 'ghi', 'Gohir.A06G012900' => 'ghi', 'Gohir.A06G035901' => 'ghi', 'Gohir.A06G127100' => 'ghi', 'Gohir.A06G210500' => 'ghi', 'Gohir.A08G008650' => 'ghi', 'Gohir.A09G072700' => 'ghi', 'Gohir.A09G088301' => 'ghi', 'Gohir.A10G040600' => 'ghi', 'Gohir.A12G036300' => 'ghi', 'Gohir.A12G143350' => 'ghi', 'Gohir.A12G165500' => 'ghi', 'Gohir.A13G145700' => 'ghi', 'Gohir.D01G050000' => 'ghi', 'Gohir.D01G051366' => 'ghi', 'Gohir.D01G161350' => 'ghi', 'Gohir.D02G065900' => 'ghi', 'Gohir.D05G164200' => 'ghi', 'Gohir.D05G355500' => 'ghi', 'Gohir.D06G010400' => 'ghi', 'Gohir.D06G111250' => 'ghi', 'Gohir.D06G132000' => 'ghi', 'Gohir.D06G210500' => 'ghi', 'Gohir.D07G165675' => 'ghi', 'Gohir.D08G062240' => 'ghi', 'Gohir.D08G086101' => 'ghi', 'Gohir.D08G138060' => 'ghi', 'Gohir.D09G072300' => 'ghi', 'Gohir.D10G041400' => 'ghi', 'Gohir.D11G191020' => 'ghi', 'Gohir.D11G212066' => 'ghi', 'Gohir.D12G036300' => 'ghi', 'Gohir.D12G168600' => 'ghi', 'Gohir.D13G150600' => 'ghi', 'Gorai.001G057300' => 'gra', 'Gorai.002G069900' => 'gra', 'Gorai.002G200000' => 'gra', 'Gorai.003G067600' => 'gra', 'Gorai.005G074800' => 'gra', 'Gorai.006G087300' => 'gra', 'Gorai.008G037500' => 'gra', 'Gorai.008G181400' => 'gra', 'Gorai.009G169400' => 'gra', 'Gorai.009G387900' => 'gra', 'Gorai.010G013300' => 'gra', 'Gorai.010G153800' => 'gra', 'Gorai.010G255800' => 'gra', 'Gorai.011G043700' => 'gra', 'Gorai.011G198900' => 'gra', 'Gorai.013G168400' => 'gra', 'GSVIVG01005212001' => 'vvi', 'GSVIVG01006163001' => 'vvi', 'GSVIVG01009625001' => 'vvi', 'GSVIVG01014338001' => 'vvi', 'GSVIVG01020005001' => 'vvi', 'GSVIVG01021450001' => 'vvi', 'GSVIVG01023975001' => 'vvi', 'GSVIVG01034490001' => 'vvi', 'HanXRQChr04g0112071' => 'han', 'HanXRQChr05g0131151' => 'han', 'HanXRQChr09g0262371' => 'han', 'HanXRQChr09g0268401' => 'han', 'HanXRQChr10g0279241' => 'han', 'HanXRQChr10g0297961' => 'han', 'HanXRQChr11g0326231' => 'han', 'HanXRQChr11g0328471' => 'han', 'HanXRQChr16g0507941' => 'han', 'HanXRQChr17g0560211' => 'han', 'Haze_02108' => 'cav', 'Haze_02428' => 'cav', 'Haze_05593' => 'cav', 'Haze_06448' => 'cav', 'Haze_09427' => 'cav', 'Haze_12022' => 'cav', 'Haze_17612' => 'cav', 'Haze_17928' => 'cav', 'Hma1.2p1_0032F.1_g019250' => 'hma', 'Hma1.2p1_0163F.1_g072690' => 'hma', 'Hma1.2p1_0265F.1_g106710' => 'hma', 'Hma1.2p1_0286F.1_g113970' => 'hma', 'Hma1.2p1_0363F.1_g136640' => 'hma', 'Hma1.2p1_0584F.1_g183470' => 'hma', 'Hma1.2p1_0885F.1_g232570' => 'hma', 'HPP92_006022' => 'vpl', 'HPP92_007320' => 'vpl', 'HPP92_011521' => 'vpl', 'HPP92_019387' => 'vpl', 'HPP92_024038' => 'vpl', 'Hund05891' => 'sun', 'Hund06450' => 'sun', 'Hund12053' => 'sun', 'Hund16800' => 'sun', 'Hund21222' => 'sun', 'Hund22896' => 'sun', 'Hund23746' => 'sun', 'Hund27083' => 'sun', 'Lalb_Chr02g0141831' => 'lal', 'Lalb_Chr02g0141841' => 'lal', 'Lalb_Chr05g0220411' => 'lal', 'Lalb_Chr06g0162081' => 'lal', 'Lalb_Chr09g0327651' => 'lal', 'Lalb_Chr13g0295051' => 'lal', 'Lalb_Chr15g0086801' => 'lal', 'Lalb_Chr16g0383781' => 'lal', 'Lalb_Chr16g0383791' => 'lal', 'Lalb_Chr18g0055441' => 'lal', 'Lalb_Chr18g0059611' => 'lal', 'Lalb_Chr20g0109661' => 'lal', 'Lalb_Chr20g0109831' => 'lal', 'Lalb_Chr20g0121871' => 'lal', 'Lalb_Chr22g0355361' => 'lal', 'Lalb_Chr25g0286371' => 'lal', 'Lj1A1187G43' => 'lonja', 'Lj1A1205T50' => 'lonja', 'Lj1A800G33' => 'lonja', 'Lj1C1187T7' => 'lonja', 'Lj1C843T11' => 'lonja', 'Lj1g0010940' => 'lja', 'Lj2A288T69' => 'lonja', 'Lj3g0024276' => 'lja', 'Lj4A47T76' => 'lonja', 'Lj4g0005805' => 'lja', 'Lj4g0006097' => 'lja', 'Lj4g0008528' => 'lja', 'Lj4g0024907' => 'lja', 'Lj5g0012472' => 'lja', 'Lj5g0018648' => 'lja', 'Lj6C789G1' => 'lonja', 'Lj6g0004000' => 'lja', 'Lj7A292G67' => 'lonja', 'Lj7A292T64' => 'lonja', 'Lj9A400T58' => 'lonja', 'Lsat_1_v5_gn_1_126181' => 'lsa', 'Lsat_1_v5_gn_4_123041' => 'lsa', 'Lsat_1_v5_gn_4_133620' => 'lsa', 'Lsat_1_v5_gn_4_53221' => 'lsa', 'Lsat_1_v5_gn_4_71961' => 'lsa', 'Lsat_1_v5_gn_7_105241' => 'lsa', 'Lsat_1_v5_gn_7_21361' => 'lsa', 'Lsat_1_v5_gn_7_28860' => 'lsa', 'Lsat_1_v5_gn_7_31260' => 'lsa', 'Lsat_1_v5_gn_8_52801' => 'lsa', 'Manes.02G191400' => 'mes', 'Manes.03G110100' => 'mes', 'Manes.04G071100' => 'mes', 'Manes.05G100500' => 'mes', 'Manes.05G164700' => 'mes', 'Manes.15G087000' => 'mes', 'Manes.15G121500' => 'mes', 'Manes.16G028300' => 'mes', 'Manes.17G046100' => 'mes', 'Manes.17G069800' => 'mes', 'Manes.18G100500' => 'mes', 'Mapoly0002s0109' => 'mpo', 'Mapoly0024s0007' => 'mpo', 'Mapoly0089s0032' => 'mpo', 'MBI04_g42241_MAGBIO' => 'mbi', 'MBI05_g11988_MAGBIO' => 'mbi', 'MBI05_g35452_MAGBIO' => 'mbi', 'MBI07_g30179_MAGBIO' => 'mbi', 'MBI07_g35859_MAGBIO' => 'mbi', 'MBI07_g35860_MAGBIO' => 'mbi', 'MBI07_g37166_MAGBIO' => 'mbi', 'MBI08_g18172_MAGBIO' => 'mbi', 'MBI09_g08441_MAGBIO' => 'mbi', 'MBI13_g01676_MAGBIO' => 'mbi', 'MBI14_g42955_MAGBIO' => 'mbi', 'MBI16_g13161_MAGBIO' => 'mbi', 'MBI17_g27204_MAGBIO' => 'mbi', 'MBI19_g21595_MAGBIO' => 'mbi', 'MD00G1148400' => 'mdo', 'MD02G1301200' => 'mdo', 'MD03G1227800' => 'mdo', 'MD05G1041100' => 'mdo', 'MD05G1124800' => 'mdo', 'MD05G1284000' => 'mdo', 'MD05G1338800' => 'mdo', 'MD05G1338900' => 'mdo', 'MD07G1022800' => 'mdo', 'MD10G1047500' => 'mdo', 'MD10G1127500' => 'mdo', 'MD10G1262300' => 'mdo', 'MD10G1293800' => 'mdo', 'MD16G1074300' => 'mdo', 'Medtr1g021670' => 'mtr', 'Medtr1g096320' => 'mtr', 'Medtr2g013690' => 'mtr', 'Medtr2g019450' => 'mtr', 'Medtr2g085170' => 'mtr', 'Medtr4g088785' => 'mtr', 'Medtr8g055930' => 'mtr', 'Medtr8g085850' => 'mtr', 'MELO3C002605.2' => 'cme', 'MELO3C003891.2' => 'cme', 'MELO3C004012.2' => 'cme', 'MELO3C007134.2' => 'cme', 'MELO3C008118.2' => 'cme', 'MELO3C016700.2' => 'cme', 'MELO3C024127.2' => 'cme', 'MELO3C033361.2' => 'cme', 'MELO3C033362.2' => 'cme', 'Migut.C00430' => 'egut', 'Migut.C01246' => 'egut', 'Migut.E00101' => 'egut', 'Migut.H01486' => 'egut', 'Migut.H01939' => 'egut', 'Migut.K00360' => 'egut', 'Migut.M00910' => 'egut', 'Migut.M01139' => 'egut', 'Migut.N02677' => 'egut', 'MSTRG.13252' => 'ama', 'MSTRG.14701' => 'ama', 'MSTRG.1521' => 'ama', 'MSTRG.15884' => 'ama', 'MSTRG.16242' => 'ama', 'MSTRG.22285' => 'ama', 'MSTRG.22444' => 'ama', 'MSTRG.2349' => 'ama', 'MSTRG.26308' => 'ama', 'MSTRG.28296' => 'ama', 'MSTRG.9895' => 'ama', 'Nitab4.5_0000110g0060' => 'nta', 'Nitab4.5_0000420g0130' => 'nta', 'Nitab4.5_0000422g0030' => 'nta', 'Nitab4.5_0000560g0180' => 'nta', 'Nitab4.5_0000703g0100' => 'nta', 'Nitab4.5_0000786g0200' => 'nta', 'Nitab4.5_0001336g0020' => 'nta', 'Nitab4.5_0001796g0030' => 'nta', 'Nitab4.5_0003348g0060' => 'nta', 'Nitab4.5_0003698g0040' => 'nta', 'Nitab4.5_0003942g0090' => 'nta', 'Nitab4.5_0004775g0070' => 'nta', 'Nitab4.5_0004864g0030' => 'nta', 'Nitab4.5_0005615g0020' => 'nta', 'Nitab4.5_0009288g0030' => 'nta', 'Nitab4.5_0009341g0010' => 'nta', 'Nitab4.5_0009535g0010' => 'nta', 'Nn1g03995' => 'nnu', 'Nn1g04100' => 'nnu', 'Nn1g06530' => 'nnu', 'Nn3g16404' => 'nnu', 'Nn3g17212' => 'nnu', 'Nn3g20776' => 'nnu', 'Nn3g21923' => 'nnu', 'Nn5g27737' => 'nnu', 'Nn5g29461' => 'nnu', 'Nn7g38355' => 'nnu', 'Nn8g39873' => 'nnu', 'Oeu000548.2' => 'oeu', 'Oeu004672.1' => 'oeu', 'Oeu015605.2' => 'oeu', 'Oeu016092.1' => 'oeu', 'Oeu017879.3' => 'oeu', 'Oeu024910.1' => 'oeu', 'Oeu028965.1' => 'oeu', 'Oeu031269.1' => 'oeu', 'Oeu031270.1' => 'oeu', 'Oeu032535.1' => 'oeu', 'Oeu034151.1' => 'oeu', 'Oeu034152.1' => 'oeu', 'Oeu034588.2' => 'oeu', 'Oeu050846.1' => 'oeu', 'Oeu050849.2' => 'oeu', 'Oeu051063.2' => 'oeu', 'Oeu052368.1' => 'oeu', 'Oeu052370.1' => 'oeu', 'Os01g0210400' => 'osa', 'Os01g0304300' => 'osa', 'Os01g0749100' => 'osa', 'Os02g0745800' => 'osa', 'Os03g0769050' => 'osa', 'Os05g0531500' => 'osa', 'Os06g0724300' => 'osa', 'Os11g0198100' => 'osa', 'Peaxi162Scf00069g01425' => 'pax', 'Peaxi162Scf00280g00811' => 'pax', 'Peaxi162Scf00310g00615' => 'pax', 'Peaxi162Scf00362g00542' => 'pax', 'Peaxi162Scf00461g00310' => 'pax', 'Peaxi162Scf00530g00118' => 'pax', 'Peaxi162Scf00541g00057' => 'pax', 'Peaxi162Scf00661g00017' => 'pax', 'Peaxi162Scf00926g00027' => 'pax', 'Peaxi162Scf01064g00263' => 'pax', 'Peaxi162Scf01211g00135' => 'pax', 'PGR004G2336' => 'pgr', 'PGR042G0327' => 'pgr', 'PGR042G1957' => 'pgr', 'PGR042G2003' => 'pgr', 'PGR042G3929' => 'pgr', 'PGR083G1137' => 'pgr', 'PGR083G1364' => 'pgr', 'PGSC0003DMG400003381' => 'stu', 'PGSC0003DMG400003417' => 'stu', 'PGSC0003DMG400008981' => 'stu', 'PGSC0003DMG400012417' => 'stu', 'PGSC0003DMG400012823' => 'stu', 'PGSC0003DMG400016885' => 'stu', 'PGSC0003DMG400022812' => 'stu', 'PGSC0003DMG400029726' => 'stu', 'PGSC0003DMG401009243' => 'stu', 'PGSC0003DMG401031505' => 'stu', 'PGSC0003DMG402031505' => 'stu', 'Phvul.001G017600' => 'pvu', 'Phvul.002G193500' => 'pvu', 'Phvul.002G228900' => 'pvu', 'Phvul.002G236800' => 'pvu', 'Phvul.003G049500' => 'pvu', 'Phvul.005G072000' => 'pvu', 'Phvul.006G164800' => 'pvu', 'Phvul.006G185100' => 'pvu', 'Phvul.007G090000' => 'pvu', 'Potri.001G399800' => 'ptr', 'Potri.002G149900' => 'ptr', 'Potri.004G044100' => 'ptr', 'Potri.004G177600' => 'ptr', 'Potri.009G138000' => 'ptr', 'Potri.010G094000' => 'ptr', 'Potri.011G053000' => 'ptr', 'Potri.011G119300' => 'ptr', 'Potri.013G113700' => 'ptr', 'Potri.018G107800' => 'ptr', 'Potri.019G084100' => 'ptr', 'Pp3c14_23720' => 'ppa', 'Pp3c16_6340' => 'ppa', 'Pp3c23_13420' => 'ppa', 'Pp3c24_2740' => 'ppa', 'Pp3c25_860' => 'ppa', 'Pp3c8_21750' => 'ppa', 'Prupe.1G273000' => 'ppe', 'Prupe.1G273700' => 'ppe', 'Prupe.1G274100' => 'ppe', 'Prupe.2G023300' => 'ppe', 'Prupe.4G048000' => 'ppe', 'Prupe.4G080400' => 'ppe', 'Prupe.4G181200' => 'ppe', 'Prupe.8G056900' => 'ppe', 'Prupe.8G168700' => 'ppe', 'Psat1g189080' => 'psa', 'Psat1g204760' => 'psa', 'Psat4g175560' => 'psa', 'Psat4g177720' => 'psa', 'Psat5g244240' => 'psa', 'Psat6g010720' => 'psa', 'Psat6g187200' => 'psa', 'Psat7g072040' => 'psa', 'PSO017G3501' => 'pso', 'PSO063G2148' => 'pso', 'PSO063G5608' => 'pso', 'PSO210G6392' => 'pso', 'PSO541G2319' => 'pso', 'PSO541G2836' => 'pso', 'PSO541G4012' => 'pso', 'PSO541G6253' => 'pso', 'PSO675G0580' => 'pso', 'PSO675G0856' => 'pso', 'PSO675G5635' => 'pso', 'PSO675G9157' => 'pso', 'PSO832G1660' => 'pso', 'PSO832G1969' => 'pso', 'QL02p007186' => 'qlo', 'QL02p033904' => 'qlo', 'QL03p064391' => 'qlo', 'QL05p040593' => 'qlo', 'QL05p058242' => 'qlo', 'QL08p021825' => 'qlo', 'QL11p004981' => 'qlo', 'RcHm_v2.0_Chr1g0318301' => 'rch', 'RcHm_v2.0_Chr4g0418501' => 'rch', 'RcHm_v2.0_Chr4g0439971' => 'rch', 'RcHm_v2.0_Chr5g0008541' => 'rch', 'RcHm_v2.0_Chr5g0014101' => 'rch', 'RcHm_v2.0_Chr5g0014131' => 'rch', 'RcHm_v2.0_Chr5g0033621' => 'rch', 'RcHm_v2.0_Chr6g0272041' => 'rch', 'RcHm_v2.0_Chr6g0278831' => 'rch', 'Rhsim02G0130400' => 'rsi', 'Rhsim02G0171100' => 'rsi', 'Rhsim05G0053000' => 'rsi', 'Rhsim05G0053100' => 'rsi', 'Rhsim06G0096500' => 'rsi', 'Rhsim06G0096600' => 'rsi', 'Rhsim06G0199100' => 'rsi', 'Rhsim12G0062300' => 'rsi', 'Rhsim12G0062800' => 'rsi', 'Sabra02G0118600' => 'sbr', 'Sabra04G0027300' => 'sbr', 'Sabra04G0119500' => 'sbr', 'Sabra08G0112500' => 'sbr', 'Sabra11G0036800' => 'sbr', 'Sabra11G0103800' => 'sbr', 'Sabra13G0096300' => 'sbr', 'Sabra16G0262300' => 'sbr', 'Sabra18G0091700' => 'sbr', 'Sabra19G0095400' => 'sbr', 'SalBow6G3080' => 'sbo', 'SalBow7G1157' => 'sbo', 'SalBow7G2123' => 'sbo', 'SalBow7G2285' => 'sbo', 'SalBow7G3537' => 'sbo', 'SalBow8G2947' => 'sbo', 'SalBow8G4463' => 'sbo', 'SalBow8G5466' => 'sbo', 'Sc01g0001750' => 'sci', 'Sc02g0006640' => 'sci', 'Sc02g0006670' => 'sci', 'Sc04g0008220' => 'sci', 'Sc05g0006190' => 'sci', 'Sc08g0002760' => 'sci', 'Sc17g0006170' => 'sci', 'Sc22g0002050' => 'sci', 'Sc23g0001190' => 'sci', 'Sc24g0000980' => 'sci', 'Sed0006245' => 'sed', 'Sed0007543' => 'sed', 'Sed0009411' => 'sed', 'Sed0010765' => 'sed', 'Sed0012944' => 'sed', 'Sed0014682' => 'sed', 'Sed0016174' => 'sed', 'Sed0016796' => 'sed', 'Sed0020317' => 'sed', 'Sed0021467' => 'sed', 'SEGI_01316' => 'sgi', 'SEGI_03374' => 'sgi', 'SEGI_16265' => 'sgi', 'SEGI_18569' => 'sgi', 'SEGI_20351' => 'sgi', 'SEGI_26395' => 'sgi', 'SEGI_29469' => 'sgi', 'SEGI_34771' => 'sgi', 'SEGI_36769' => 'sgi', 'SEGI_37139' => 'sgi', 'SGA_v2.0_scaffold100G29687' => 'sas', 'SGA_v2.0_scaffold118G32472' => 'sas', 'SGA_v2.0_scaffold14G07051' => 'sas', 'SGA_v2.0_scaffold183G39845' => 'sas', 'SGA_v2.0_scaffold1G00174' => 'sas', 'SGA_v2.0_scaffold22G09714' => 'sas', 'SGA_v2.0_scaffold333G48992' => 'sas', 'SGA_v2.0_scaffold46G17491' => 'sas', 'SGA_v2.0_scaffold49G18294' => 'sas', 'SGA_v2.0_scaffold63G21658' => 'sas', 'SHI01741' => 'shi', 'SHI05771' => 'shi', 'SHI18077' => 'shi', 'SHI20525' => 'shi', 'SHI20527' => 'shi', 'SHI20528' => 'shi', 'SMO172G0185' => 'smo', 'SMO198G0020' => 'smo', 'SMO351G0006' => 'smo', 'SMO356G0118' => 'smo', 'SMO358G0296' => 'smo', 'SMO367G0079' => 'smo', 'SMO367G1277' => 'smo', 'Solyc01g014220.3' => 'sly', 'Solyc01g111770.2' => 'sly', 'Solyc02g078180.3' => 'sly', 'Solyc03g006430.3' => 'sly', 'Solyc03g006456.1' => 'sly', 'Solyc03g079860.2' => 'sly', 'Solyc04g079770.3' => 'sly', 'Solyc05g007430.4' => 'sly', 'Solyc07g063150.3' => 'sly', 'Solyc08g016620.3' => 'sly', 'Solyc09g057590.3' => 'sly', 'Solyc09g057600.1' => 'sly', 'Solyc10g009050.3' => 'sly', 'Solyc11g017420.2' => 'sly', 'Sopen01g053810' => 'spe', 'Sopen02g023040' => 'spe', 'Sopen03g002440' => 'spe', 'Sopen04g033350' => 'spe', 'Sopen05g003310' => 'spe', 'Sopen07g004050' => 'spe', 'Sopen07g031340' => 'spe', 'Sopen08g006990' => 'spe', 'Sopen10g004830' => 'spe', 'Sopen11g009370' => 'spe', 'Sp1g24450' => 'spa', 'Sp1g29670' => 'spa', 'Sp1g39600' => 'spa', 'Sp2g11080' => 'spa', 'Sp2g13970' => 'spa', 'Sp4g16130' => 'spa', 'Sp6g13080' => 'spa', 'Sp7g37270' => 'spa', 'TAR371G0065' => 'tar', 'TAR376G0340' => 'tar', 'TAR376G0435' => 'tar', 'TAR381G0002' => 'tar', 'TAR381G1236' => 'tar', 'TAR624G0055' => 'tar', 'TAR624G0324' => 'tar', 'TAR624G0696' => 'tar', 'TAR624G0906' => 'tar', 'TAR625G0107' => 'tar', 'TAR626G0015' => 'tar', 'TAR626G1356' => 'tar', 'TAR627G0888' => 'tar', 'TAR628G0399' => 'tar', 'TAR628G1327' => 'tar', 'TAR629G2831' => 'tar', 'TAR629G2874' => 'tar', 'TAR633G1432' => 'tar', 'TAR633G2771' => 'tar', 'THA.LOC104803394' => 'tha', 'THA.LOC104805153' => 'tha', 'THA.LOC104806784' => 'tha', 'THA.LOC104810473' => 'tha', 'THA.LOC104813100' => 'tha', 'THA.LOC104814215' => 'tha', 'THA.LOC104815554' => 'tha', 'THA.LOC104820544' => 'tha', 'THA.LOC104824754' => 'tha', 'THA.LOC104827717' => 'tha', 'Thecc.02G031400' => 'tca', 'Thecc.02G055900' => 'tca', 'Thecc.02G350800' => 'tca', 'Thecc.06G150900' => 'tca', 'Thecc.06G186600' => 'tca', 'Thecc.07G089600' => 'tca', 'Thecc.08G020400' => 'tca', 'Thecc.08G182100' => 'tca', 'Thhalv10000873m.g' => 'esa', 'Thhalv10004185m.g' => 'esa', 'Thhalv10006981m.g' => 'esa', 'Thhalv10007204m.g' => 'esa', 'Thhalv10011374m.g' => 'esa', 'Thhalv10013482m.g' => 'esa', 'Thhalv10017801m.g' => 'esa', 'Thhalv10024983m.g' => 'esa', 'TPR.G12072' => 'tpr', 'TPR.G15769' => 'tpr', 'TPR.G16504' => 'tpr', 'TPR.G16506' => 'tpr', 'TPR.G24345' => 'tpr', 'TPR.G26666' => 'tpr', 'TPR.G27320' => 'tpr', 'TPR.G31819' => 'tpr', 'TPR.G38879' => 'tpr', 'TPR.G39015' => 'tpr', 'TPR.G8819' => 'tpr', 'TWI09G0924' => 'twi', 'TWI12G0811' => 'twi', 'TWI12G1294' => 'twi', 'TWI31G0150' => 'twi', 'TWI36G1262' => 'twi', 'TWI38G1287' => 'twi', 'TWI38G1633' => 'twi', 'TWI38G1982' => 'twi', 'TWI39G0116' => 'twi', 'TWI60G1011' => 'twi', 'TWI63G0171' => 'twi', 'TWI73G0839' => 'twi', 'TWI79G1511' => 'twi', 'unitig_0.g915' => 'ugi', 'unitig_0.g916' => 'ugi', 'unitig_21.g20219' => 'ugi', 'unitig_21.g20416' => 'ugi', 'unitig_578.g16132' => 'ugi', 'unitig_578.g16718' => 'ugi', 'unitig_62.g23481' => 'ugi', 'unitig_744.g24535' => 'ugi', 'unitig_749.g13525' => 'ugi', 'vmacro01248' => 'vma', 'vmacro02290' => 'vma', 'vmacro10946' => 'vma', 'vmacro11865' => 'vma', 'vmacro12493' => 'vma', 'vmacro17322' => 'vma', 'vmacro21599' => 'vma', 'vmacro23041' => 'vma', 'VMungo0251G0004' => 'vmu', 'VMungo0251G2639' => 'vmu', 'VMungo0251G2967' => 'vmu', 'VMungo0540G0864' => 'vmu', 'VMungo0540G1569' => 'vmu', 'VMungo0647G0317' => 'vmu', 'VMungo0720G1373' => 'vmu', 'VMungo0720G1508' => 'vmu', 'VMungo1080G0485' => 'vmu', 'VMungo1215G3177' => 'vmu', 'Zm00001eb112600' => 'zma', 'Zm00001eb120220' => 'zma', 'Zm00001eb153240' => 'zma', 'Zm00001eb168880' => 'zma', 'Zm00001eb213920' => 'zma', 'Zm00001eb228280' => 'zma', 'Zm00001eb254580' => 'zma', 'Zm00001eb272180' => 'zma', 'Zm00001eb293190' => 'zma', 'Zm00001eb322930' => 'zma', 'Zm00001eb353360' => 'zma', 'Zm00001eb353390' => 'zma', 'Zm00001eb353430' => 'zma', 'Zm00001eb353440' => 'zma', 'Zm00001eb353780' => 'zma' ), 'gf_id' => 'HOM05D000499', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000499' ), 'data_identifier' => 'HOM05D000499', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000499', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1066', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p29780' => 'bna', 'A02p33180' => 'bna', 'A03p16470' => 'bna', 'A03p66010' => 'bna', 'A04p25970' => 'bna', 'A06p01270' => 'bna', 'A06p46080' => 'bna', 'A07p11400' => 'bna', 'A08p01840' => 'bna', 'A08p08230' => 'bna', 'A08p25740' => 'bna', 'A09p32070' => 'bna', 'A09p37830' => 'bna', 'A09p42840' => 'bna', 'A09p42850' => 'bna', 'Aa31LG10G2060' => 'aar', 'Aa31LG2G7410' => 'aar', 'Aa31LG6G10200' => 'aar', 'Aa31LG6G16680' => 'aar', 'Aa31LG6G8470' => 'aar', 'Aa31LG9G12730' => 'aar', 'Aa31LG9G13680' => 'aar', 'Aa31LG9G14920' => 'aar', 'Aa31LG9G6650' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4977' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5467' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3254' => 'aag', 'Actinidia02578' => 'ach', 'Actinidia07693' => 'ach', 'Actinidia08413' => 'ach', 'Actinidia08414' => 'ach', 'Actinidia15289' => 'ach', 'Actinidia19871' => 'ach', 'Actinidia21475' => 'ach', 'Actinidia22576' => 'ach', 'Actinidia28327' => 'ach', 'Actinidia32491' => 'ach', 'Actinidia39463' => 'ach', 'Actinidia39571' => 'ach', 'Ah.01g013750' => 'amhyb', 'Ah.01g023210' => 'amhyb', 'Ah.04g164850' => 'amhyb', 'Ah.05g178060' => 'amhyb', 'Ah.07g204270' => 'amhyb', 'Ah.07g208480' => 'amhyb', 'Ah.09g237410' => 'amhyb', 'Ah.14g089460' => 'amhyb', 'AL1G41790' => 'aly', 'AL1G49050' => 'aly', 'AL1G53810' => 'aly', 'AL1G61400' => 'aly', 'AL4G18580' => 'aly', 'AL5G12510' => 'aly', 'AL5G12540' => 'aly', 'AL6G43230' => 'aly', 'AL7G10370' => 'aly', 'AL7G19250' => 'aly', 'AL8G12240' => 'aly', 'AL8G18540' => 'aly', 'Aqoxy1G02409' => 'aox', 'Aqoxy2G03993' => 'aox', 'Aqoxy3G03357' => 'aox', 'Aqoxy4G00785' => 'aox', 'Aqoxy5G02598' => 'aox', 'Aqoxy6G00132' => 'aox', 'Aqoxy7G01776' => 'aox', 'Aqoxy7G02316' => 'aox', 'Aqoxy7G03973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.12AFKW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B8730' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27IQR1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3F75VG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3RE0GA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41TCQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.527VTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FIR39' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5W8UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DA38EV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ63HS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H1I32C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HC27T5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4M8AP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7N3CZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9UVDZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LS1NQA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT1D4B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SKC4TM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCFV76' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF9Q1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQWD9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1ZM88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WE07RT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YCK7VH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJE6Q6' => 'arhy', 'AT1G28240' => 'ath', 'AT1G34550' => 'ath', 'AT1G53040' => 'ath', 'AT2G02910' => 'ath', 'AT4G09630' => 'ath', 'AT4G38500' => 'ath', 'AT5G42660' => 'ath', 'AT5G46220' => 'ath', 'ATR0152G026' => 'atr', 'ATR0564G343' => 'atr', 'ATR0706G151' => 'atr', 'ATR0733G207' => 'atr', 'ATR0751G234' => 'atr', 'ATR0807G048' => 'atr', 'ATR1091G084' => 'atr', 'Atru.chr10.1229' => 'acertr', 'Atru.chr10.1230' => 'acertr', 'Atru.chr10.1874' => 'acertr', 'Atru.chr11.1808' => 'acertr', 'Atru.chr13.1795' => 'acertr', 'Atru.chr13.570' => 'acertr', 'Atru.chr2.2608' => 'acertr', 'Atru.chr2.2609' => 'acertr', 'Atru.chr5.3428' => 'acertr', 'Atru.chr8.1171' => 'acertr', 'AUR62004651' => 'cqu', 'AUR62008675' => 'cqu', 'AUR62010014' => 'cqu', 'AUR62013004' => 'cqu', 'AUR62014825' => 'cqu', 'AUR62015015' => 'cqu', 'AUR62015151' => 'cqu', 'AUR62017020' => 'cqu', 'AUR62019422' => 'cqu', 'AUR62023570' => 'cqu', 'AUR62025571' => 'cqu', 'AUR62029098' => 'cqu', 'AUR62033863' => 'cqu', 'AUR62034296' => 'cqu', 'AUR62040075' => 'cqu', 'BcaB02g07334' => 'bca', 'BcaB02g10575' => 'bca', 'BcaB03g12119' => 'bca', 'BcaB03g12120' => 'bca', 'BcaB03g13945' => 'bca', 'BcaB04g17123' => 'bca', 'BcaB04g17867' => 'bca', 'BcaB04g19839' => 'bca', 'BcaB07g30317' => 'bca', 'BcaB07g32432' => 'bca', 'BcaB07g33362' => 'bca', 'BcaB08g36611' => 'bca', 'BcaC01g00028' => 'bca', 'BcaC01g01356' => 'bca', 'BcaC01g02034' => 'bca', 'BcaC01g06051' => 'bca', 'BcaC03g16839' => 'bca', 'BcaC03g17176' => 'bca', 'BcaC05g26829' => 'bca', 'BcaC06g31490' => 'bca', 'BcaC06g35344' => 'bca', 'BcaC06g36570' => 'bca', 'BcaC07g37537' => 'bca', 'BcaC08g43491' => 'bca', 'BcaC08g43773' => 'bca', 'BcaNung00234' => 'bca', 'BcaNung01982' => 'bca', 'BcaNung03707' => 'bca', 'BcaNung06454' => 'bca', 'BolC2t10762H' => 'bol', 'BolC2t11191H' => 'bol', 'BolC3t14322H' => 'bol', 'BolC3t19747H' => 'bol', 'BolC3t21425H' => 'bol', 'BolC4t27800H' => 'bol', 'BolC5t31423H' => 'bol', 'BolC6t35951H' => 'bol', 'BolC6t36282H' => 'bol', 'BolC7t40678H' => 'bol', 'BolC7t40679H' => 'bol', 'BolC7t42222H' => 'bol', 'BolC7t43492H' => 'bol', 'BolC7t46785H' => 'bol', 'BolC8t47853H' => 'bol', 'BolC9t56805H' => 'bol', 'BraA02t08000Z' => 'bra', 'BraA02t08341Z' => 'bra', 'BraA03t10936Z' => 'bra', 'BraA03t15657Z' => 'bra', 'BraA04t18100Z' => 'bra', 'BraA05t20523Z' => 'bra', 'BraA06t23353Z' => 'bra', 'BraA06t27473Z' => 'bra', 'BraA06t27769Z' => 'bra', 'BraA07t28928Z' => 'bra', 'BraA08t32236Z' => 'bra', 'BraA08t32841Z' => 'bra', 'BraA08t34524Z' => 'bra', 'BraA09t38742Z' => 'bra', 'BraA09t39295Z' => 'bra', 'C02p47180' => 'bna', 'C02p50990' => 'bna', 'C03p19360' => 'bna', 'C03p74950' => 'bna', 'C03p91000' => 'bna', 'C04p63260' => 'bna', 'C05p27050' => 'bna', 'C06p08750' => 'bna', 'C06p11490' => 'bna', 'C07p02820' => 'bna', 'C07p17180' => 'bna', 'C07p29440' => 'bna', 'C07p63730' => 'bna', 'C09p39260' => 'bna', 'CAN.G1164.34' => 'can', 'CAN.G1164.39' => 'can', 'CAN.G1530.3' => 'can', 'CAN.G162.61' => 'can', 'CAN.G176.6' => 'can', 'CAN.G289.49' => 'can', 'CAN.G370.21' => 'can', 'CAN.G370.22' => 'can', 'CAN.G371.117' => 'can', 'CAN.G58.37' => 'can', 'CAN.G588.98' => 'can', 'CANSAT21G2266' => 'cansat', 'CANSAT25G2799' => 'cansat', 'CANSAT35G0862' => 'cansat', 'CANSAT35G1704' => 'cansat', 'CANSAT35G1760' => 'cansat', 'CANSAT56G3971' => 'cansat', 'CANSAT56G4116' => 'cansat', 'CANSAT80G1259' => 'cansat', 'CARHR027730' => 'chi', 'CARHR033880' => 'chi', 'CARHR043270' => 'chi', 'CARHR145330' => 'chi', 'CARHR145340' => 'chi', 'CARHR175570' => 'chi', 'CARHR181570' => 'chi', 'CARHR258470' => 'chi', 'CARHR260490' => 'chi', 'CARHR294220' => 'chi', 'Carub.0001s2668' => 'cru', 'Carub.0001s3257' => 'cru', 'Carub.0001s4220' => 'cru', 'Carub.0005s0179' => 'cru', 'Carub.0006s2807' => 'cru', 'Carub.0007s0039' => 'cru', 'Carub.0008s0169' => 'cru', 'Carub.0008s0636' => 'cru', 'Ca_00338_v3' => 'car', 'Ca_00542_v3' => 'car', 'Ca_01844_v3' => 'car', 'Ca_10611_v3' => 'car', 'Ca_13326_v3' => 'car', 'Ca_17944_v3' => 'car', 'Ca_18546_v3' => 'car', 'Ca_24219_v3' => 'car', 'Ca_29972_v3' => 'car', 'CBR_g3681' => 'cbr', 'CBR_g40021' => 'cbr', 'Cc01_g08140' => 'ccan', 'Cc02_g13410' => 'ccan', 'Cc02_g37480' => 'ccan', 'Cc05_g12030' => 'ccan', 'Cc09_g03370' => 'ccan', 'Cc09_g10300' => 'ccan', 'Cc10_g03530' => 'ccan', 'Cc10_g11380' => 'ccan', 'CDE01G0176' => 'cde', 'CDE02G0675' => 'cde', 'CDE02G0942' => 'cde', 'CDE02G1153' => 'cde', 'CDE02G4177' => 'cde', 'CDE04G2117' => 'cde', 'CDE04G2736' => 'cde', 'CDE08G1161' => 'cde', 'CDE09G1238' => 'cde', 'Cfa000467' => 'cfa', 'Cfa000947' => 'cfa', 'Cfa004969' => 'cfa', 'Cfa005284' => 'cfa', 'Cfa008993' => 'cfa', 'Cfa018187' => 'cfa', 'Cfa018454' => 'cfa', 'Cfa020585' => 'cfa', 'Ciclev10000424m.g' => 'ccl', 'Ciclev10003605m.g' => 'ccl', 'Ciclev10007828m.g' => 'ccl', 'Ciclev10014620m.g' => 'ccl', 'Ciclev10015169m.g' => 'ccl', 'Ciclev10018291m.g' => 'ccl', 'Ciclev10028256m.g' => 'ccl', 'Ciclev10033822m.g' => 'ccl', 'CiPaw.05G060300' => 'cil', 'CiPaw.05G085000' => 'cil', 'CiPaw.06G083700' => 'cil', 'CiPaw.06G120300' => 'cil', 'CiPaw.09G060500' => 'cil', 'CiPaw.09G123800' => 'cil', 'CiPaw.11G169700' => 'cil', 'CiPaw.12G118300' => 'cil', 'CiPaw.15G071000' => 'cil', 'CiPaw.15G081900' => 'cil', 'ClCG01G024610' => 'cla', 'ClCG03G006070' => 'cla', 'ClCG05G019250' => 'cla', 'ClCG09G009500' => 'cla', 'ClCG11G008200' => 'cla', 'ClCG11G018080' => 'cla', 'COL.COLO4_17373' => 'col', 'COL.COLO4_22994' => 'col', 'COL.COLO4_26389' => 'col', 'COL.COLO4_27170' => 'col', 'COL.COLO4_31074' => 'col', 'COL.COLO4_31465' => 'col', 'COL.COLO4_36438' => 'col', 'COL.COLO4_36439' => 'col', 'Cpa.g.c38781' => 'cpa', 'Cpa.g.sc128.12' => 'cpa', 'Cpa.g.sc166.7' => 'cpa', 'Cpa.g.sc166.8' => 'cpa', 'Cpa.g.sc20.111' => 'cpa', 'Cpa.g.sc27.31' => 'cpa', 'Cpa.g.sc64.36' => 'cpa', 'Cpa.g.sc64.37' => 'cpa', 'Cpa.g.sc66.49' => 'cpa', 'Cpa.g.sc80.64' => 'cpa', 'CsaV3_1G012320' => 'csa', 'CsaV3_2G008480' => 'csa', 'CsaV3_2G033450' => 'csa', 'CsaV3_3G044830' => 'csa', 'CsaV3_4G033710' => 'csa', 'CsaV3_6G051730' => 'csa', 'CsaV3_7G025350' => 'csa', 'CSS0001067' => 'camsi', 'CSS0005996' => 'camsi', 'CSS0006590' => 'camsi', 'CSS0009673' => 'camsi', 'CSS0010201' => 'camsi', 'CSS0010549' => 'camsi', 'CSS0011364' => 'camsi', 'CSS0014473' => 'camsi', 'CSS0014961' => 'camsi', 'CSS0020191' => 'camsi', 'CSS0021165' => 'camsi', 'CSS0022306' => 'camsi', 'CSS0030591' => 'camsi', 'CSS0030696' => 'camsi', 'CSS0032653' => 'camsi', 'CSS0037487' => 'camsi', 'CSS0041102' => 'camsi', 'CSS0041261' => 'camsi', 'CSS0046246' => 'camsi', 'CSS0049256' => 'camsi', 'DCAR_004075' => 'dca', 'DCAR_011538' => 'dca', 'DCAR_019553' => 'dca', 'DCAR_020952' => 'dca', 'DCAR_021739' => 'dca', 'DCAR_027407' => 'dca', 'DCAR_027913' => 'dca', 'DCAR_028066' => 'dca', 'Dinv05899' => 'din', 'Dinv07563' => 'din', 'Dinv08010' => 'din', 'Dinv14125' => 'din', 'Dinv20172' => 'din', 'Dinv30743' => 'din', 'Dinv31229' => 'din', 'Dinv34162' => 'din', 'Dinv36028' => 'din', 'Dinv39368' => 'din', 'Dinv40565' => 'din', 'Dinv41706' => 'din', 'Duzib052G0089' => 'dzi', 'Duzib116G0641' => 'dzi', 'Duzib132G0069' => 'dzi', 'Duzib132G1219' => 'dzi', 'Duzib147G0278' => 'dzi', 'Duzib160G0480' => 'dzi', 'Duzib170G0661' => 'dzi', 'Duzib177G0591' => 'dzi', 'Duzib187G1353' => 'dzi', 'Duzib192G0858' => 'dzi', 'Duzib192G0883' => 'dzi', 'Duzib213G0506' => 'dzi', 'Duzib235G0289' => 'dzi', 'Duzib251G0422' => 'dzi', 'ECA232G3898' => 'eca', 'ECA233G5950' => 'eca', 'ECA234G1699' => 'eca', 'ECA234G2421' => 'eca', 'ECA236G0426' => 'eca', 'ECA236G4331' => 'eca', 'ECA248G2573' => 'eca', 'EL10Ac1g00077' => 'bvu', 'EL10Ac1g01746' => 'bvu', 'EL10Ac2g03464' => 'bvu', 'EL10Ac4g08176' => 'bvu', 'EL10Ac7g17521' => 'bvu', 'EL10Ac8g20386' => 'bvu', 'EL10Ac9g21343' => 'bvu', 'EL10Ac9g22688' => 'bvu', 'Eucgr.B03434' => 'egr', 'Eucgr.D00618' => 'egr', 'Eucgr.E02395' => 'egr', 'Eucgr.F01129' => 'egr', 'Eucgr.F02622' => 'egr', 'Eucgr.F04207' => 'egr', 'FAN01G0570' => 'fan', 'FAN03G3351' => 'fan', 'FAN06G3702' => 'fan', 'FAN07G2149' => 'fan', 'FAN10G3758' => 'fan', 'FAN11G1170' => 'fan', 'FAN11G2050' => 'fan', 'FAN11G2724' => 'fan', 'FAN12G1700' => 'fan', 'FAN12G2028' => 'fan', 'FAN15G1160' => 'fan', 'FAN15G3063' => 'fan', 'FAN16G2540' => 'fan', 'FAN16G3077' => 'fan', 'FAN16G3624' => 'fan', 'FAN17G0221' => 'fan', 'FAN20G2492' => 'fan', 'FAN20G2905' => 'fan', 'FAN21G0548' => 'fan', 'FAN21G1300' => 'fan', 'FAN22G0077' => 'fan', 'FAN22G1315' => 'fan', 'FAN24G1280' => 'fan', 'FAN24G1445' => 'fan', 'FAN24G3527' => 'fan', 'FAN25G0464' => 'fan', 'FAN25G2885' => 'fan', 'FAN25G3270' => 'fan', 'FAN27G1101' => 'fan', 'FAN27G2846' => 'fan', 'FAN27G3524' => 'fan', 'FvH4_2g11770' => 'fve', 'FvH4_2g15630' => 'fve', 'FvH4_3g05570' => 'fve', 'FvH4_3g09110' => 'fve', 'FvH4_3g19940' => 'fve', 'FvH4_4g04821' => 'fve', 'FvH4_4g31480' => 'fve', 'FvH4_7g01740' => 'fve', 'Glyma.05G130400' => 'gma', 'Glyma.05G156400' => 'gma', 'Glyma.07G197000' => 'gma', 'Glyma.08G085151' => 'gma', 'Glyma.08G114500' => 'gma', 'Glyma.08G300400' => 'gma', 'Glyma.10G215800' => 'gma', 'Glyma.12G224400' => 'gma', 'Glyma.13G179300' => 'gma', 'Glyma.13G218151' => 'gma', 'Glyma.13G238800' => 'gma', 'Glyma.13G276900' => 'gma', 'Glyma.14G078200' => 'gma', 'Glyma.15G074500' => 'gma', 'Glyma.15G094100' => 'gma', 'Glyma.17G247200' => 'gma', 'Glyma.18G120100' => 'gma', 'Glyma.20G176000' => 'gma', 'Gohir.A01G063600' => 'ghi', 'Gohir.A01G170301' => 'ghi', 'Gohir.A02G060500' => 'ghi', 'Gohir.A05G133850' => 'ghi', 'Gohir.A05G161400' => 'ghi', 'Gohir.A06G012900' => 'ghi', 'Gohir.A06G035901' => 'ghi', 'Gohir.A06G127100' => 'ghi', 'Gohir.A06G210500' => 'ghi', 'Gohir.A08G008650' => 'ghi', 'Gohir.A09G072700' => 'ghi', 'Gohir.A09G088301' => 'ghi', 'Gohir.A10G040600' => 'ghi', 'Gohir.A12G036300' => 'ghi', 'Gohir.A12G143350' => 'ghi', 'Gohir.A12G165500' => 'ghi', 'Gohir.A13G145700' => 'ghi', 'Gohir.D01G050000' => 'ghi', 'Gohir.D01G051366' => 'ghi', 'Gohir.D01G161350' => 'ghi', 'Gohir.D02G065900' => 'ghi', 'Gohir.D05G164200' => 'ghi', 'Gohir.D05G355500' => 'ghi', 'Gohir.D06G010400' => 'ghi', 'Gohir.D06G111250' => 'ghi', 'Gohir.D06G132000' => 'ghi', 'Gohir.D06G210500' => 'ghi', 'Gohir.D07G165675' => 'ghi', 'Gohir.D08G062240' => 'ghi', 'Gohir.D08G086101' => 'ghi', 'Gohir.D08G138060' => 'ghi', 'Gohir.D09G072300' => 'ghi', 'Gohir.D10G041400' => 'ghi', 'Gohir.D11G191020' => 'ghi', 'Gohir.D11G212066' => 'ghi', 'Gohir.D12G036300' => 'ghi', 'Gohir.D12G168600' => 'ghi', 'Gohir.D13G150600' => 'ghi', 'Gorai.001G057300' => 'gra', 'Gorai.002G069900' => 'gra', 'Gorai.002G200000' => 'gra', 'Gorai.003G067600' => 'gra', 'Gorai.005G074800' => 'gra', 'Gorai.006G087300' => 'gra', 'Gorai.008G037500' => 'gra', 'Gorai.008G181400' => 'gra', 'Gorai.009G169400' => 'gra', 'Gorai.009G387900' => 'gra', 'Gorai.010G013300' => 'gra', 'Gorai.010G153800' => 'gra', 'Gorai.010G255800' => 'gra', 'Gorai.011G043700' => 'gra', 'Gorai.011G198900' => 'gra', 'Gorai.013G168400' => 'gra', 'GSVIVG01005212001' => 'vvi', 'GSVIVG01006163001' => 'vvi', 'GSVIVG01009625001' => 'vvi', 'GSVIVG01014338001' => 'vvi', 'GSVIVG01020005001' => 'vvi', 'GSVIVG01021450001' => 'vvi', 'GSVIVG01023975001' => 'vvi', 'GSVIVG01034490001' => 'vvi', 'HanXRQChr04g0112071' => 'han', 'HanXRQChr05g0131151' => 'han', 'HanXRQChr09g0262371' => 'han', 'HanXRQChr09g0268401' => 'han', 'HanXRQChr10g0279241' => 'han', 'HanXRQChr10g0297961' => 'han', 'HanXRQChr11g0326231' => 'han', 'HanXRQChr11g0328471' => 'han', 'HanXRQChr16g0507941' => 'han', 'HanXRQChr17g0560211' => 'han', 'Haze_02108' => 'cav', 'Haze_02428' => 'cav', 'Haze_05593' => 'cav', 'Haze_06448' => 'cav', 'Haze_09427' => 'cav', 'Haze_12022' => 'cav', 'Haze_17612' => 'cav', 'Haze_17928' => 'cav', 'Hma1.2p1_0032F.1_g019250' => 'hma', 'Hma1.2p1_0163F.1_g072690' => 'hma', 'Hma1.2p1_0265F.1_g106710' => 'hma', 'Hma1.2p1_0286F.1_g113970' => 'hma', 'Hma1.2p1_0363F.1_g136640' => 'hma', 'Hma1.2p1_0584F.1_g183470' => 'hma', 'Hma1.2p1_0885F.1_g232570' => 'hma', 'HPP92_006022' => 'vpl', 'HPP92_007320' => 'vpl', 'HPP92_011521' => 'vpl', 'HPP92_019387' => 'vpl', 'HPP92_024038' => 'vpl', 'Hund05891' => 'sun', 'Hund06450' => 'sun', 'Hund12053' => 'sun', 'Hund16800' => 'sun', 'Hund21222' => 'sun', 'Hund22896' => 'sun', 'Hund23746' => 'sun', 'Hund27083' => 'sun', 'Lalb_Chr02g0141831' => 'lal', 'Lalb_Chr02g0141841' => 'lal', 'Lalb_Chr05g0220411' => 'lal', 'Lalb_Chr06g0162081' => 'lal', 'Lalb_Chr09g0327651' => 'lal', 'Lalb_Chr13g0295051' => 'lal', 'Lalb_Chr15g0086801' => 'lal', 'Lalb_Chr16g0383781' => 'lal', 'Lalb_Chr16g0383791' => 'lal', 'Lalb_Chr18g0055441' => 'lal', 'Lalb_Chr18g0059611' => 'lal', 'Lalb_Chr20g0109661' => 'lal', 'Lalb_Chr20g0109831' => 'lal', 'Lalb_Chr20g0121871' => 'lal', 'Lalb_Chr22g0355361' => 'lal', 'Lalb_Chr25g0286371' => 'lal', 'Lj1A1187G43' => 'lonja', 'Lj1A1205T50' => 'lonja', 'Lj1A800G33' => 'lonja', 'Lj1C1187T7' => 'lonja', 'Lj1C843T11' => 'lonja', 'Lj1g0010940' => 'lja', 'Lj2A288T69' => 'lonja', 'Lj3g0024276' => 'lja', 'Lj4A47T76' => 'lonja', 'Lj4g0005805' => 'lja', 'Lj4g0006097' => 'lja', 'Lj4g0008528' => 'lja', 'Lj4g0024907' => 'lja', 'Lj5g0012472' => 'lja', 'Lj5g0018648' => 'lja', 'Lj6C789G1' => 'lonja', 'Lj6g0004000' => 'lja', 'Lj7A292G67' => 'lonja', 'Lj7A292T64' => 'lonja', 'Lj9A400T58' => 'lonja', 'Lsat_1_v5_gn_1_126181' => 'lsa', 'Lsat_1_v5_gn_4_123041' => 'lsa', 'Lsat_1_v5_gn_4_133620' => 'lsa', 'Lsat_1_v5_gn_4_53221' => 'lsa', 'Lsat_1_v5_gn_4_71961' => 'lsa', 'Lsat_1_v5_gn_7_105241' => 'lsa', 'Lsat_1_v5_gn_7_21361' => 'lsa', 'Lsat_1_v5_gn_7_28860' => 'lsa', 'Lsat_1_v5_gn_7_31260' => 'lsa', 'Lsat_1_v5_gn_8_52801' => 'lsa', 'Manes.02G191400' => 'mes', 'Manes.03G110100' => 'mes', 'Manes.04G071100' => 'mes', 'Manes.05G100500' => 'mes', 'Manes.05G164700' => 'mes', 'Manes.15G087000' => 'mes', 'Manes.15G121500' => 'mes', 'Manes.16G028300' => 'mes', 'Manes.17G046100' => 'mes', 'Manes.17G069800' => 'mes', 'Manes.18G100500' => 'mes', 'Mapoly0002s0109' => 'mpo', 'Mapoly0024s0007' => 'mpo', 'Mapoly0089s0032' => 'mpo', 'MBI04_g42241_MAGBIO' => 'mbi', 'MBI05_g11988_MAGBIO' => 'mbi', 'MBI05_g35452_MAGBIO' => 'mbi', 'MBI07_g30179_MAGBIO' => 'mbi', 'MBI07_g35859_MAGBIO' => 'mbi', 'MBI07_g35860_MAGBIO' => 'mbi', 'MBI07_g37166_MAGBIO' => 'mbi', 'MBI08_g18172_MAGBIO' => 'mbi', 'MBI09_g08441_MAGBIO' => 'mbi', 'MBI13_g01676_MAGBIO' => 'mbi', 'MBI14_g42955_MAGBIO' => 'mbi', 'MBI16_g13161_MAGBIO' => 'mbi', 'MBI17_g27204_MAGBIO' => 'mbi', 'MBI19_g21595_MAGBIO' => 'mbi', 'MD00G1148400' => 'mdo', 'MD02G1301200' => 'mdo', 'MD03G1227800' => 'mdo', 'MD05G1041100' => 'mdo', 'MD05G1124800' => 'mdo', 'MD05G1284000' => 'mdo', 'MD05G1338800' => 'mdo', 'MD05G1338900' => 'mdo', 'MD07G1022800' => 'mdo', 'MD10G1047500' => 'mdo', 'MD10G1127500' => 'mdo', 'MD10G1262300' => 'mdo', 'MD10G1293800' => 'mdo', 'MD16G1074300' => 'mdo', 'Medtr1g021670' => 'mtr', 'Medtr1g096320' => 'mtr', 'Medtr2g013690' => 'mtr', 'Medtr2g019450' => 'mtr', 'Medtr2g085170' => 'mtr', 'Medtr4g088785' => 'mtr', 'Medtr8g055930' => 'mtr', 'Medtr8g085850' => 'mtr', 'MELO3C002605.2' => 'cme', 'MELO3C003891.2' => 'cme', 'MELO3C004012.2' => 'cme', 'MELO3C007134.2' => 'cme', 'MELO3C008118.2' => 'cme', 'MELO3C016700.2' => 'cme', 'MELO3C024127.2' => 'cme', 'MELO3C033361.2' => 'cme', 'MELO3C033362.2' => 'cme', 'Migut.C00430' => 'egut', 'Migut.C01246' => 'egut', 'Migut.E00101' => 'egut', 'Migut.H01486' => 'egut', 'Migut.H01939' => 'egut', 'Migut.K00360' => 'egut', 'Migut.M00910' => 'egut', 'Migut.M01139' => 'egut', 'Migut.N02677' => 'egut', 'MSTRG.13252' => 'ama', 'MSTRG.14701' => 'ama', 'MSTRG.1521' => 'ama', 'MSTRG.15884' => 'ama', 'MSTRG.16242' => 'ama', 'MSTRG.22285' => 'ama', 'MSTRG.22444' => 'ama', 'MSTRG.2349' => 'ama', 'MSTRG.26308' => 'ama', 'MSTRG.28296' => 'ama', 'MSTRG.9895' => 'ama', 'Nitab4.5_0000110g0060' => 'nta', 'Nitab4.5_0000420g0130' => 'nta', 'Nitab4.5_0000422g0030' => 'nta', 'Nitab4.5_0000560g0180' => 'nta', 'Nitab4.5_0000703g0100' => 'nta', 'Nitab4.5_0000786g0200' => 'nta', 'Nitab4.5_0001336g0020' => 'nta', 'Nitab4.5_0001796g0030' => 'nta', 'Nitab4.5_0003348g0060' => 'nta', 'Nitab4.5_0003698g0040' => 'nta', 'Nitab4.5_0003942g0090' => 'nta', 'Nitab4.5_0004775g0070' => 'nta', 'Nitab4.5_0004864g0030' => 'nta', 'Nitab4.5_0005615g0020' => 'nta', 'Nitab4.5_0009288g0030' => 'nta', 'Nitab4.5_0009341g0010' => 'nta', 'Nitab4.5_0009535g0010' => 'nta', 'Nn1g03995' => 'nnu', 'Nn1g04100' => 'nnu', 'Nn1g06530' => 'nnu', 'Nn3g16404' => 'nnu', 'Nn3g17212' => 'nnu', 'Nn3g20776' => 'nnu', 'Nn3g21923' => 'nnu', 'Nn5g27737' => 'nnu', 'Nn5g29461' => 'nnu', 'Nn7g38355' => 'nnu', 'Nn8g39873' => 'nnu', 'Oeu000548.2' => 'oeu', 'Oeu004672.1' => 'oeu', 'Oeu015605.2' => 'oeu', 'Oeu016092.1' => 'oeu', 'Oeu017879.3' => 'oeu', 'Oeu024910.1' => 'oeu', 'Oeu028965.1' => 'oeu', 'Oeu031269.1' => 'oeu', 'Oeu031270.1' => 'oeu', 'Oeu032535.1' => 'oeu', 'Oeu034151.1' => 'oeu', 'Oeu034152.1' => 'oeu', 'Oeu034588.2' => 'oeu', 'Oeu050846.1' => 'oeu', 'Oeu050849.2' => 'oeu', 'Oeu051063.2' => 'oeu', 'Oeu052368.1' => 'oeu', 'Oeu052370.1' => 'oeu', 'Os01g0210400' => 'osa', 'Os01g0304300' => 'osa', 'Os01g0749100' => 'osa', 'Os02g0745800' => 'osa', 'Os03g0769050' => 'osa', 'Os05g0531500' => 'osa', 'Os06g0724300' => 'osa', 'Os11g0198100' => 'osa', 'Peaxi162Scf00069g01425' => 'pax', 'Peaxi162Scf00280g00811' => 'pax', 'Peaxi162Scf00310g00615' => 'pax', 'Peaxi162Scf00362g00542' => 'pax', 'Peaxi162Scf00461g00310' => 'pax', 'Peaxi162Scf00530g00118' => 'pax', 'Peaxi162Scf00541g00057' => 'pax', 'Peaxi162Scf00661g00017' => 'pax', 'Peaxi162Scf00926g00027' => 'pax', 'Peaxi162Scf01064g00263' => 'pax', 'Peaxi162Scf01211g00135' => 'pax', 'PGR004G2336' => 'pgr', 'PGR042G0327' => 'pgr', 'PGR042G1957' => 'pgr', 'PGR042G2003' => 'pgr', 'PGR042G3929' => 'pgr', 'PGR083G1137' => 'pgr', 'PGR083G1364' => 'pgr', 'PGSC0003DMG400003381' => 'stu', 'PGSC0003DMG400003417' => 'stu', 'PGSC0003DMG400008981' => 'stu', 'PGSC0003DMG400012417' => 'stu', 'PGSC0003DMG400012823' => 'stu', 'PGSC0003DMG400016885' => 'stu', 'PGSC0003DMG400022812' => 'stu', 'PGSC0003DMG400029726' => 'stu', 'PGSC0003DMG401009243' => 'stu', 'PGSC0003DMG401031505' => 'stu', 'PGSC0003DMG402031505' => 'stu', 'Phvul.001G017600' => 'pvu', 'Phvul.002G193500' => 'pvu', 'Phvul.002G228900' => 'pvu', 'Phvul.002G236800' => 'pvu', 'Phvul.003G049500' => 'pvu', 'Phvul.005G072000' => 'pvu', 'Phvul.006G164800' => 'pvu', 'Phvul.006G185100' => 'pvu', 'Phvul.007G090000' => 'pvu', 'Potri.001G399800' => 'ptr', 'Potri.002G149900' => 'ptr', 'Potri.004G044100' => 'ptr', 'Potri.004G177600' => 'ptr', 'Potri.009G138000' => 'ptr', 'Potri.010G094000' => 'ptr', 'Potri.011G053000' => 'ptr', 'Potri.011G119300' => 'ptr', 'Potri.013G113700' => 'ptr', 'Potri.018G107800' => 'ptr', 'Potri.019G084100' => 'ptr', 'Pp3c14_23720' => 'ppa', 'Pp3c16_6340' => 'ppa', 'Pp3c23_13420' => 'ppa', 'Pp3c24_2740' => 'ppa', 'Pp3c25_860' => 'ppa', 'Pp3c8_21750' => 'ppa', 'Prupe.1G273000' => 'ppe', 'Prupe.1G273700' => 'ppe', 'Prupe.1G274100' => 'ppe', 'Prupe.2G023300' => 'ppe', 'Prupe.4G048000' => 'ppe', 'Prupe.4G080400' => 'ppe', 'Prupe.4G181200' => 'ppe', 'Prupe.8G056900' => 'ppe', 'Prupe.8G168700' => 'ppe', 'Psat1g189080' => 'psa', 'Psat1g204760' => 'psa', 'Psat4g175560' => 'psa', 'Psat4g177720' => 'psa', 'Psat5g244240' => 'psa', 'Psat6g010720' => 'psa', 'Psat6g187200' => 'psa', 'Psat7g072040' => 'psa', 'PSO017G3501' => 'pso', 'PSO063G2148' => 'pso', 'PSO063G5608' => 'pso', 'PSO210G6392' => 'pso', 'PSO541G2319' => 'pso', 'PSO541G2836' => 'pso', 'PSO541G4012' => 'pso', 'PSO541G6253' => 'pso', 'PSO675G0580' => 'pso', 'PSO675G0856' => 'pso', 'PSO675G5635' => 'pso', 'PSO675G9157' => 'pso', 'PSO832G1660' => 'pso', 'PSO832G1969' => 'pso', 'QL02p007186' => 'qlo', 'QL02p033904' => 'qlo', 'QL03p064391' => 'qlo', 'QL05p040593' => 'qlo', 'QL05p058242' => 'qlo', 'QL08p021825' => 'qlo', 'QL11p004981' => 'qlo', 'RcHm_v2.0_Chr1g0318301' => 'rch', 'RcHm_v2.0_Chr4g0418501' => 'rch', 'RcHm_v2.0_Chr4g0439971' => 'rch', 'RcHm_v2.0_Chr5g0008541' => 'rch', 'RcHm_v2.0_Chr5g0014101' => 'rch', 'RcHm_v2.0_Chr5g0014131' => 'rch', 'RcHm_v2.0_Chr5g0033621' => 'rch', 'RcHm_v2.0_Chr6g0272041' => 'rch', 'RcHm_v2.0_Chr6g0278831' => 'rch', 'Rhsim02G0130400' => 'rsi', 'Rhsim02G0171100' => 'rsi', 'Rhsim05G0053000' => 'rsi', 'Rhsim05G0053100' => 'rsi', 'Rhsim06G0096500' => 'rsi', 'Rhsim06G0096600' => 'rsi', 'Rhsim06G0199100' => 'rsi', 'Rhsim12G0062300' => 'rsi', 'Rhsim12G0062800' => 'rsi', 'Sabra02G0118600' => 'sbr', 'Sabra04G0027300' => 'sbr', 'Sabra04G0119500' => 'sbr', 'Sabra08G0112500' => 'sbr', 'Sabra11G0036800' => 'sbr', 'Sabra11G0103800' => 'sbr', 'Sabra13G0096300' => 'sbr', 'Sabra16G0262300' => 'sbr', 'Sabra18G0091700' => 'sbr', 'Sabra19G0095400' => 'sbr', 'SalBow6G3080' => 'sbo', 'SalBow7G1157' => 'sbo', 'SalBow7G2123' => 'sbo', 'SalBow7G2285' => 'sbo', 'SalBow7G3537' => 'sbo', 'SalBow8G2947' => 'sbo', 'SalBow8G4463' => 'sbo', 'SalBow8G5466' => 'sbo', 'Sc01g0001750' => 'sci', 'Sc02g0006640' => 'sci', 'Sc02g0006670' => 'sci', 'Sc04g0008220' => 'sci', 'Sc05g0006190' => 'sci', 'Sc08g0002760' => 'sci', 'Sc17g0006170' => 'sci', 'Sc22g0002050' => 'sci', 'Sc23g0001190' => 'sci', 'Sc24g0000980' => 'sci', 'Sed0006245' => 'sed', 'Sed0007543' => 'sed', 'Sed0009411' => 'sed', 'Sed0010765' => 'sed', 'Sed0012944' => 'sed', 'Sed0014682' => 'sed', 'Sed0016174' => 'sed', 'Sed0016796' => 'sed', 'Sed0020317' => 'sed', 'Sed0021467' => 'sed', 'SEGI_01316' => 'sgi', 'SEGI_03374' => 'sgi', 'SEGI_16265' => 'sgi', 'SEGI_18569' => 'sgi', 'SEGI_20351' => 'sgi', 'SEGI_26395' => 'sgi', 'SEGI_29469' => 'sgi', 'SEGI_34771' => 'sgi', 'SEGI_36769' => 'sgi', 'SEGI_37139' => 'sgi', 'SGA_v2.0_scaffold100G29687' => 'sas', 'SGA_v2.0_scaffold118G32472' => 'sas', 'SGA_v2.0_scaffold14G07051' => 'sas', 'SGA_v2.0_scaffold183G39845' => 'sas', 'SGA_v2.0_scaffold1G00174' => 'sas', 'SGA_v2.0_scaffold22G09714' => 'sas', 'SGA_v2.0_scaffold333G48992' => 'sas', 'SGA_v2.0_scaffold46G17491' => 'sas', 'SGA_v2.0_scaffold49G18294' => 'sas', 'SGA_v2.0_scaffold63G21658' => 'sas', 'SHI01741' => 'shi', 'SHI05771' => 'shi', 'SHI18077' => 'shi', 'SHI20525' => 'shi', 'SHI20527' => 'shi', 'SHI20528' => 'shi', 'SMO172G0185' => 'smo', 'SMO198G0020' => 'smo', 'SMO351G0006' => 'smo', 'SMO356G0118' => 'smo', 'SMO358G0296' => 'smo', 'SMO367G0079' => 'smo', 'SMO367G1277' => 'smo', 'Solyc01g014220.3' => 'sly', 'Solyc01g111770.2' => 'sly', 'Solyc02g078180.3' => 'sly', 'Solyc03g006430.3' => 'sly', 'Solyc03g006456.1' => 'sly', 'Solyc03g079860.2' => 'sly', 'Solyc04g079770.3' => 'sly', 'Solyc05g007430.4' => 'sly', 'Solyc07g063150.3' => 'sly', 'Solyc08g016620.3' => 'sly', 'Solyc09g057590.3' => 'sly', 'Solyc09g057600.1' => 'sly', 'Solyc10g009050.3' => 'sly', 'Solyc11g017420.2' => 'sly', 'Sopen01g053810' => 'spe', 'Sopen02g023040' => 'spe', 'Sopen03g002440' => 'spe', 'Sopen04g033350' => 'spe', 'Sopen05g003310' => 'spe', 'Sopen07g004050' => 'spe', 'Sopen07g031340' => 'spe', 'Sopen08g006990' => 'spe', 'Sopen10g004830' => 'spe', 'Sopen11g009370' => 'spe', 'Sp1g24450' => 'spa', 'Sp1g29670' => 'spa', 'Sp1g39600' => 'spa', 'Sp2g11080' => 'spa', 'Sp2g13970' => 'spa', 'Sp4g16130' => 'spa', 'Sp6g13080' => 'spa', 'Sp7g37270' => 'spa', 'TAR371G0065' => 'tar', 'TAR376G0340' => 'tar', 'TAR376G0435' => 'tar', 'TAR381G0002' => 'tar', 'TAR381G1236' => 'tar', 'TAR624G0055' => 'tar', 'TAR624G0324' => 'tar', 'TAR624G0696' => 'tar', 'TAR624G0906' => 'tar', 'TAR625G0107' => 'tar', 'TAR626G0015' => 'tar', 'TAR626G1356' => 'tar', 'TAR627G0888' => 'tar', 'TAR628G0399' => 'tar', 'TAR628G1327' => 'tar', 'TAR629G2831' => 'tar', 'TAR629G2874' => 'tar', 'TAR633G1432' => 'tar', 'TAR633G2771' => 'tar', 'THA.LOC104803394' => 'tha', 'THA.LOC104805153' => 'tha', 'THA.LOC104806784' => 'tha', 'THA.LOC104810473' => 'tha', 'THA.LOC104813100' => 'tha', 'THA.LOC104814215' => 'tha', 'THA.LOC104815554' => 'tha', 'THA.LOC104820544' => 'tha', 'THA.LOC104824754' => 'tha', 'THA.LOC104827717' => 'tha', 'Thecc.02G031400' => 'tca', 'Thecc.02G055900' => 'tca', 'Thecc.02G350800' => 'tca', 'Thecc.06G150900' => 'tca', 'Thecc.06G186600' => 'tca', 'Thecc.07G089600' => 'tca', 'Thecc.08G020400' => 'tca', 'Thecc.08G182100' => 'tca', 'Thhalv10000873m.g' => 'esa', 'Thhalv10004185m.g' => 'esa', 'Thhalv10006981m.g' => 'esa', 'Thhalv10007204m.g' => 'esa', 'Thhalv10011374m.g' => 'esa', 'Thhalv10013482m.g' => 'esa', 'Thhalv10017801m.g' => 'esa', 'Thhalv10024983m.g' => 'esa', 'TPR.G12072' => 'tpr', 'TPR.G15769' => 'tpr', 'TPR.G16504' => 'tpr', 'TPR.G16506' => 'tpr', 'TPR.G24345' => 'tpr', 'TPR.G26666' => 'tpr', 'TPR.G27320' => 'tpr', 'TPR.G31819' => 'tpr', 'TPR.G38879' => 'tpr', 'TPR.G39015' => 'tpr', 'TPR.G8819' => 'tpr', 'TWI09G0924' => 'twi', 'TWI12G0811' => 'twi', 'TWI12G1294' => 'twi', 'TWI31G0150' => 'twi', 'TWI36G1262' => 'twi', 'TWI38G1287' => 'twi', 'TWI38G1633' => 'twi', 'TWI38G1982' => 'twi', 'TWI39G0116' => 'twi', 'TWI60G1011' => 'twi', 'TWI63G0171' => 'twi', 'TWI73G0839' => 'twi', 'TWI79G1511' => 'twi', 'unitig_0.g915' => 'ugi', 'unitig_0.g916' => 'ugi', 'unitig_21.g20219' => 'ugi', 'unitig_21.g20416' => 'ugi', 'unitig_578.g16132' => 'ugi', 'unitig_578.g16718' => 'ugi', 'unitig_62.g23481' => 'ugi', 'unitig_744.g24535' => 'ugi', 'unitig_749.g13525' => 'ugi', 'vmacro01248' => 'vma', 'vmacro02290' => 'vma', 'vmacro10946' => 'vma', 'vmacro11865' => 'vma', 'vmacro12493' => 'vma', 'vmacro17322' => 'vma', 'vmacro21599' => 'vma', 'vmacro23041' => 'vma', 'VMungo0251G0004' => 'vmu', 'VMungo0251G2639' => 'vmu', 'VMungo0251G2967' => 'vmu', 'VMungo0540G0864' => 'vmu', 'VMungo0540G1569' => 'vmu', 'VMungo0647G0317' => 'vmu', 'VMungo0720G1373' => 'vmu', 'VMungo0720G1508' => 'vmu', 'VMungo1080G0485' => 'vmu', 'VMungo1215G3177' => 'vmu', 'Zm00001eb112600' => 'zma', 'Zm00001eb120220' => 'zma', 'Zm00001eb153240' => 'zma', 'Zm00001eb168880' => 'zma', 'Zm00001eb213920' => 'zma', 'Zm00001eb228280' => 'zma', 'Zm00001eb254580' => 'zma', 'Zm00001eb272180' => 'zma', 'Zm00001eb293190' => 'zma', 'Zm00001eb322930' => 'zma', 'Zm00001eb353360' => 'zma', 'Zm00001eb353390' => 'zma', 'Zm00001eb353430' => 'zma', 'Zm00001eb353440' => 'zma', 'Zm00001eb353780' => 'zma' ) $gf_id = 'HOM05D000499' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000499' ) $data_identifier = 'HOM05D000499' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 29, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 12, 'amhyb' => (int) 8, 'aly' => (int) 12, 'aox' => (int) 9, 'arhy' => (int) 26, 'ath' => (int) 8, 'atr' => (int) 7, 'acertr' => (int) 10, 'cqu' => (int) 15, 'bca' => (int) 29, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 11, 'cansat' => (int) 8, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 9, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 8, 'cpa' => (int) 10, 'csa' => (int) 7, 'camsi' => (int) 20, 'dca' => (int) 8, 'din' => (int) 12, 'dzi' => (int) 14, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 6, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 38, 'gra' => (int) 16, 'vvi' => (int) 8, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 5, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 11, 'lja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 11, 'mpo' => (int) 3, 'mbi' => (int) 14, 'mdo' => (int) 14, 'mtr' => (int) 8, 'cme' => (int) 9, 'egut' => (int) 9, 'ama' => (int) 11, 'nta' => (int) 17, 'nnu' => (int) 11, 'oeu' => (int) 18, 'osa' => (int) 8, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 6, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 9, 'rsi' => (int) 9, 'sbr' => (int) 10, 'sbo' => (int) 8, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 10, 'sas' => (int) 10, 'shi' => (int) 6, 'smo' => (int) 7, 'sly' => (int) 14, 'spe' => (int) 10, 'spa' => (int) 8, 'tar' => (int) 19, 'tha' => (int) 10, 'tca' => (int) 8, 'esa' => (int) 8, 'tpr' => (int) 11, 'twi' => (int) 13, 'ugi' => (int) 9, 'vma' => (int) 8, 'vmu' => (int) 10, 'zma' => (int) 15 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb353780' $species_info = array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ) $local_species = 'acertr' $disabled = '' $selected = ''include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0;
$disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":"";
$selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":"";
$num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0;
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000499', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1066', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p29780' => 'bna', 'A02p33180' => 'bna', 'A03p16470' => 'bna', 'A03p66010' => 'bna', 'A04p25970' => 'bna', 'A06p01270' => 'bna', 'A06p46080' => 'bna', 'A07p11400' => 'bna', 'A08p01840' => 'bna', 'A08p08230' => 'bna', 'A08p25740' => 'bna', 'A09p32070' => 'bna', 'A09p37830' => 'bna', 'A09p42840' => 'bna', 'A09p42850' => 'bna', 'Aa31LG10G2060' => 'aar', 'Aa31LG2G7410' => 'aar', 'Aa31LG6G10200' => 'aar', 'Aa31LG6G16680' => 'aar', 'Aa31LG6G8470' => 'aar', 'Aa31LG9G12730' => 'aar', 'Aa31LG9G13680' => 'aar', 'Aa31LG9G14920' => 'aar', 'Aa31LG9G6650' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4977' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5467' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3254' => 'aag', 'Actinidia02578' => 'ach', 'Actinidia07693' => 'ach', 'Actinidia08413' => 'ach', 'Actinidia08414' => 'ach', 'Actinidia15289' => 'ach', 'Actinidia19871' => 'ach', 'Actinidia21475' => 'ach', 'Actinidia22576' => 'ach', 'Actinidia28327' => 'ach', 'Actinidia32491' => 'ach', 'Actinidia39463' => 'ach', 'Actinidia39571' => 'ach', 'Ah.01g013750' => 'amhyb', 'Ah.01g023210' => 'amhyb', 'Ah.04g164850' => 'amhyb', 'Ah.05g178060' => 'amhyb', 'Ah.07g204270' => 'amhyb', 'Ah.07g208480' => 'amhyb', 'Ah.09g237410' => 'amhyb', 'Ah.14g089460' => 'amhyb', 'AL1G41790' => 'aly', 'AL1G49050' => 'aly', 'AL1G53810' => 'aly', 'AL1G61400' => 'aly', 'AL4G18580' => 'aly', 'AL5G12510' => 'aly', 'AL5G12540' => 'aly', 'AL6G43230' => 'aly', 'AL7G10370' => 'aly', 'AL7G19250' => 'aly', 'AL8G12240' => 'aly', 'AL8G18540' => 'aly', 'Aqoxy1G02409' => 'aox', 'Aqoxy2G03993' => 'aox', 'Aqoxy3G03357' => 'aox', 'Aqoxy4G00785' => 'aox', 'Aqoxy5G02598' => 'aox', 'Aqoxy6G00132' => 'aox', 'Aqoxy7G01776' => 'aox', 'Aqoxy7G02316' => 'aox', 'Aqoxy7G03973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.12AFKW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B8730' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27IQR1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3F75VG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3RE0GA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41TCQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.527VTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FIR39' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5W8UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DA38EV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ63HS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H1I32C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HC27T5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4M8AP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7N3CZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9UVDZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LS1NQA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT1D4B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SKC4TM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCFV76' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF9Q1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQWD9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1ZM88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WE07RT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YCK7VH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJE6Q6' => 'arhy', 'AT1G28240' => 'ath', 'AT1G34550' => 'ath', 'AT1G53040' => 'ath', 'AT2G02910' => 'ath', 'AT4G09630' => 'ath', 'AT4G38500' => 'ath', 'AT5G42660' => 'ath', 'AT5G46220' => 'ath', 'ATR0152G026' => 'atr', 'ATR0564G343' => 'atr', 'ATR0706G151' => 'atr', 'ATR0733G207' => 'atr', 'ATR0751G234' => 'atr', 'ATR0807G048' => 'atr', 'ATR1091G084' => 'atr', 'Atru.chr10.1229' => 'acertr', 'Atru.chr10.1230' => 'acertr', 'Atru.chr10.1874' => 'acertr', 'Atru.chr11.1808' => 'acertr', 'Atru.chr13.1795' => 'acertr', 'Atru.chr13.570' => 'acertr', 'Atru.chr2.2608' => 'acertr', 'Atru.chr2.2609' => 'acertr', 'Atru.chr5.3428' => 'acertr', 'Atru.chr8.1171' => 'acertr', 'AUR62004651' => 'cqu', 'AUR62008675' => 'cqu', 'AUR62010014' => 'cqu', 'AUR62013004' => 'cqu', 'AUR62014825' => 'cqu', 'AUR62015015' => 'cqu', 'AUR62015151' => 'cqu', 'AUR62017020' => 'cqu', 'AUR62019422' => 'cqu', 'AUR62023570' => 'cqu', 'AUR62025571' => 'cqu', 'AUR62029098' => 'cqu', 'AUR62033863' => 'cqu', 'AUR62034296' => 'cqu', 'AUR62040075' => 'cqu', 'BcaB02g07334' => 'bca', 'BcaB02g10575' => 'bca', 'BcaB03g12119' => 'bca', 'BcaB03g12120' => 'bca', 'BcaB03g13945' => 'bca', 'BcaB04g17123' => 'bca', 'BcaB04g17867' => 'bca', 'BcaB04g19839' => 'bca', 'BcaB07g30317' => 'bca', 'BcaB07g32432' => 'bca', 'BcaB07g33362' => 'bca', 'BcaB08g36611' => 'bca', 'BcaC01g00028' => 'bca', 'BcaC01g01356' => 'bca', 'BcaC01g02034' => 'bca', 'BcaC01g06051' => 'bca', 'BcaC03g16839' => 'bca', 'BcaC03g17176' => 'bca', 'BcaC05g26829' => 'bca', 'BcaC06g31490' => 'bca', 'BcaC06g35344' => 'bca', 'BcaC06g36570' => 'bca', 'BcaC07g37537' => 'bca', 'BcaC08g43491' => 'bca', 'BcaC08g43773' => 'bca', 'BcaNung00234' => 'bca', 'BcaNung01982' => 'bca', 'BcaNung03707' => 'bca', 'BcaNung06454' => 'bca', 'BolC2t10762H' => 'bol', 'BolC2t11191H' => 'bol', 'BolC3t14322H' => 'bol', 'BolC3t19747H' => 'bol', 'BolC3t21425H' => 'bol', 'BolC4t27800H' => 'bol', 'BolC5t31423H' => 'bol', 'BolC6t35951H' => 'bol', 'BolC6t36282H' => 'bol', 'BolC7t40678H' => 'bol', 'BolC7t40679H' => 'bol', 'BolC7t42222H' => 'bol', 'BolC7t43492H' => 'bol', 'BolC7t46785H' => 'bol', 'BolC8t47853H' => 'bol', 'BolC9t56805H' => 'bol', 'BraA02t08000Z' => 'bra', 'BraA02t08341Z' => 'bra', 'BraA03t10936Z' => 'bra', 'BraA03t15657Z' => 'bra', 'BraA04t18100Z' => 'bra', 'BraA05t20523Z' => 'bra', 'BraA06t23353Z' => 'bra', 'BraA06t27473Z' => 'bra', 'BraA06t27769Z' => 'bra', 'BraA07t28928Z' => 'bra', 'BraA08t32236Z' => 'bra', 'BraA08t32841Z' => 'bra', 'BraA08t34524Z' => 'bra', 'BraA09t38742Z' => 'bra', 'BraA09t39295Z' => 'bra', 'C02p47180' => 'bna', 'C02p50990' => 'bna', 'C03p19360' => 'bna', 'C03p74950' => 'bna', 'C03p91000' => 'bna', 'C04p63260' => 'bna', 'C05p27050' => 'bna', 'C06p08750' => 'bna', 'C06p11490' => 'bna', 'C07p02820' => 'bna', 'C07p17180' => 'bna', 'C07p29440' => 'bna', 'C07p63730' => 'bna', 'C09p39260' => 'bna', 'CAN.G1164.34' => 'can', 'CAN.G1164.39' => 'can', 'CAN.G1530.3' => 'can', 'CAN.G162.61' => 'can', 'CAN.G176.6' => 'can', 'CAN.G289.49' => 'can', 'CAN.G370.21' => 'can', 'CAN.G370.22' => 'can', 'CAN.G371.117' => 'can', 'CAN.G58.37' => 'can', 'CAN.G588.98' => 'can', 'CANSAT21G2266' => 'cansat', 'CANSAT25G2799' => 'cansat', 'CANSAT35G0862' => 'cansat', 'CANSAT35G1704' => 'cansat', 'CANSAT35G1760' => 'cansat', 'CANSAT56G3971' => 'cansat', 'CANSAT56G4116' => 'cansat', 'CANSAT80G1259' => 'cansat', 'CARHR027730' => 'chi', 'CARHR033880' => 'chi', 'CARHR043270' => 'chi', 'CARHR145330' => 'chi', 'CARHR145340' => 'chi', 'CARHR175570' => 'chi', 'CARHR181570' => 'chi', 'CARHR258470' => 'chi', 'CARHR260490' => 'chi', 'CARHR294220' => 'chi', 'Carub.0001s2668' => 'cru', 'Carub.0001s3257' => 'cru', 'Carub.0001s4220' => 'cru', 'Carub.0005s0179' => 'cru', 'Carub.0006s2807' => 'cru', 'Carub.0007s0039' => 'cru', 'Carub.0008s0169' => 'cru', 'Carub.0008s0636' => 'cru', 'Ca_00338_v3' => 'car', 'Ca_00542_v3' => 'car', 'Ca_01844_v3' => 'car', 'Ca_10611_v3' => 'car', 'Ca_13326_v3' => 'car', 'Ca_17944_v3' => 'car', 'Ca_18546_v3' => 'car', 'Ca_24219_v3' => 'car', 'Ca_29972_v3' => 'car', 'CBR_g3681' => 'cbr', 'CBR_g40021' => 'cbr', 'Cc01_g08140' => 'ccan', 'Cc02_g13410' => 'ccan', 'Cc02_g37480' => 'ccan', 'Cc05_g12030' => 'ccan', 'Cc09_g03370' => 'ccan', 'Cc09_g10300' => 'ccan', 'Cc10_g03530' => 'ccan', 'Cc10_g11380' => 'ccan', 'CDE01G0176' => 'cde', 'CDE02G0675' => 'cde', 'CDE02G0942' => 'cde', 'CDE02G1153' => 'cde', 'CDE02G4177' => 'cde', 'CDE04G2117' => 'cde', 'CDE04G2736' => 'cde', 'CDE08G1161' => 'cde', 'CDE09G1238' => 'cde', 'Cfa000467' => 'cfa', 'Cfa000947' => 'cfa', 'Cfa004969' => 'cfa', 'Cfa005284' => 'cfa', 'Cfa008993' => 'cfa', 'Cfa018187' => 'cfa', 'Cfa018454' => 'cfa', 'Cfa020585' => 'cfa', 'Ciclev10000424m.g' => 'ccl', 'Ciclev10003605m.g' => 'ccl', 'Ciclev10007828m.g' => 'ccl', 'Ciclev10014620m.g' => 'ccl', 'Ciclev10015169m.g' => 'ccl', 'Ciclev10018291m.g' => 'ccl', 'Ciclev10028256m.g' => 'ccl', 'Ciclev10033822m.g' => 'ccl', 'CiPaw.05G060300' => 'cil', 'CiPaw.05G085000' => 'cil', 'CiPaw.06G083700' => 'cil', 'CiPaw.06G120300' => 'cil', 'CiPaw.09G060500' => 'cil', 'CiPaw.09G123800' => 'cil', 'CiPaw.11G169700' => 'cil', 'CiPaw.12G118300' => 'cil', 'CiPaw.15G071000' => 'cil', 'CiPaw.15G081900' => 'cil', 'ClCG01G024610' => 'cla', 'ClCG03G006070' => 'cla', 'ClCG05G019250' => 'cla', 'ClCG09G009500' => 'cla', 'ClCG11G008200' => 'cla', 'ClCG11G018080' => 'cla', 'COL.COLO4_17373' => 'col', 'COL.COLO4_22994' => 'col', 'COL.COLO4_26389' => 'col', 'COL.COLO4_27170' => 'col', 'COL.COLO4_31074' => 'col', 'COL.COLO4_31465' => 'col', 'COL.COLO4_36438' => 'col', 'COL.COLO4_36439' => 'col', 'Cpa.g.c38781' => 'cpa', 'Cpa.g.sc128.12' => 'cpa', 'Cpa.g.sc166.7' => 'cpa', 'Cpa.g.sc166.8' => 'cpa', 'Cpa.g.sc20.111' => 'cpa', 'Cpa.g.sc27.31' => 'cpa', 'Cpa.g.sc64.36' => 'cpa', 'Cpa.g.sc64.37' => 'cpa', 'Cpa.g.sc66.49' => 'cpa', 'Cpa.g.sc80.64' => 'cpa', 'CsaV3_1G012320' => 'csa', 'CsaV3_2G008480' => 'csa', 'CsaV3_2G033450' => 'csa', 'CsaV3_3G044830' => 'csa', 'CsaV3_4G033710' => 'csa', 'CsaV3_6G051730' => 'csa', 'CsaV3_7G025350' => 'csa', 'CSS0001067' => 'camsi', 'CSS0005996' => 'camsi', 'CSS0006590' => 'camsi', 'CSS0009673' => 'camsi', 'CSS0010201' => 'camsi', 'CSS0010549' => 'camsi', 'CSS0011364' => 'camsi', 'CSS0014473' => 'camsi', 'CSS0014961' => 'camsi', 'CSS0020191' => 'camsi', 'CSS0021165' => 'camsi', 'CSS0022306' => 'camsi', 'CSS0030591' => 'camsi', 'CSS0030696' => 'camsi', 'CSS0032653' => 'camsi', 'CSS0037487' => 'camsi', 'CSS0041102' => 'camsi', 'CSS0041261' => 'camsi', 'CSS0046246' => 'camsi', 'CSS0049256' => 'camsi', 'DCAR_004075' => 'dca', 'DCAR_011538' => 'dca', 'DCAR_019553' => 'dca', 'DCAR_020952' => 'dca', 'DCAR_021739' => 'dca', 'DCAR_027407' => 'dca', 'DCAR_027913' => 'dca', 'DCAR_028066' => 'dca', 'Dinv05899' => 'din', 'Dinv07563' => 'din', 'Dinv08010' => 'din', 'Dinv14125' => 'din', 'Dinv20172' => 'din', 'Dinv30743' => 'din', 'Dinv31229' => 'din', 'Dinv34162' => 'din', 'Dinv36028' => 'din', 'Dinv39368' => 'din', 'Dinv40565' => 'din', 'Dinv41706' => 'din', 'Duzib052G0089' => 'dzi', 'Duzib116G0641' => 'dzi', 'Duzib132G0069' => 'dzi', 'Duzib132G1219' => 'dzi', 'Duzib147G0278' => 'dzi', 'Duzib160G0480' => 'dzi', 'Duzib170G0661' => 'dzi', 'Duzib177G0591' => 'dzi', 'Duzib187G1353' => 'dzi', 'Duzib192G0858' => 'dzi', 'Duzib192G0883' => 'dzi', 'Duzib213G0506' => 'dzi', 'Duzib235G0289' => 'dzi', 'Duzib251G0422' => 'dzi', 'ECA232G3898' => 'eca', 'ECA233G5950' => 'eca', 'ECA234G1699' => 'eca', 'ECA234G2421' => 'eca', 'ECA236G0426' => 'eca', 'ECA236G4331' => 'eca', 'ECA248G2573' => 'eca', 'EL10Ac1g00077' => 'bvu', 'EL10Ac1g01746' => 'bvu', 'EL10Ac2g03464' => 'bvu', 'EL10Ac4g08176' => 'bvu', 'EL10Ac7g17521' => 'bvu', 'EL10Ac8g20386' => 'bvu', 'EL10Ac9g21343' => 'bvu', 'EL10Ac9g22688' => 'bvu', 'Eucgr.B03434' => 'egr', 'Eucgr.D00618' => 'egr', 'Eucgr.E02395' => 'egr', 'Eucgr.F01129' => 'egr', 'Eucgr.F02622' => 'egr', 'Eucgr.F04207' => 'egr', 'FAN01G0570' => 'fan', 'FAN03G3351' => 'fan', 'FAN06G3702' => 'fan', 'FAN07G2149' => 'fan', 'FAN10G3758' => 'fan', 'FAN11G1170' => 'fan', 'FAN11G2050' => 'fan', 'FAN11G2724' => 'fan', 'FAN12G1700' => 'fan', 'FAN12G2028' => 'fan', 'FAN15G1160' => 'fan', 'FAN15G3063' => 'fan', 'FAN16G2540' => 'fan', 'FAN16G3077' => 'fan', 'FAN16G3624' => 'fan', 'FAN17G0221' => 'fan', 'FAN20G2492' => 'fan', 'FAN20G2905' => 'fan', 'FAN21G0548' => 'fan', 'FAN21G1300' => 'fan', 'FAN22G0077' => 'fan', 'FAN22G1315' => 'fan', 'FAN24G1280' => 'fan', 'FAN24G1445' => 'fan', 'FAN24G3527' => 'fan', 'FAN25G0464' => 'fan', 'FAN25G2885' => 'fan', 'FAN25G3270' => 'fan', 'FAN27G1101' => 'fan', 'FAN27G2846' => 'fan', 'FAN27G3524' => 'fan', 'FvH4_2g11770' => 'fve', 'FvH4_2g15630' => 'fve', 'FvH4_3g05570' => 'fve', 'FvH4_3g09110' => 'fve', 'FvH4_3g19940' => 'fve', 'FvH4_4g04821' => 'fve', 'FvH4_4g31480' => 'fve', 'FvH4_7g01740' => 'fve', 'Glyma.05G130400' => 'gma', 'Glyma.05G156400' => 'gma', 'Glyma.07G197000' => 'gma', 'Glyma.08G085151' => 'gma', 'Glyma.08G114500' => 'gma', 'Glyma.08G300400' => 'gma', 'Glyma.10G215800' => 'gma', 'Glyma.12G224400' => 'gma', 'Glyma.13G179300' => 'gma', 'Glyma.13G218151' => 'gma', 'Glyma.13G238800' => 'gma', 'Glyma.13G276900' => 'gma', 'Glyma.14G078200' => 'gma', 'Glyma.15G074500' => 'gma', 'Glyma.15G094100' => 'gma', 'Glyma.17G247200' => 'gma', 'Glyma.18G120100' => 'gma', 'Glyma.20G176000' => 'gma', 'Gohir.A01G063600' => 'ghi', 'Gohir.A01G170301' => 'ghi', 'Gohir.A02G060500' => 'ghi', 'Gohir.A05G133850' => 'ghi', 'Gohir.A05G161400' => 'ghi', 'Gohir.A06G012900' => 'ghi', 'Gohir.A06G035901' => 'ghi', 'Gohir.A06G127100' => 'ghi', 'Gohir.A06G210500' => 'ghi', 'Gohir.A08G008650' => 'ghi', 'Gohir.A09G072700' => 'ghi', 'Gohir.A09G088301' => 'ghi', 'Gohir.A10G040600' => 'ghi', 'Gohir.A12G036300' => 'ghi', 'Gohir.A12G143350' => 'ghi', 'Gohir.A12G165500' => 'ghi', 'Gohir.A13G145700' => 'ghi', 'Gohir.D01G050000' => 'ghi', 'Gohir.D01G051366' => 'ghi', 'Gohir.D01G161350' => 'ghi', 'Gohir.D02G065900' => 'ghi', 'Gohir.D05G164200' => 'ghi', 'Gohir.D05G355500' => 'ghi', 'Gohir.D06G010400' => 'ghi', 'Gohir.D06G111250' => 'ghi', 'Gohir.D06G132000' => 'ghi', 'Gohir.D06G210500' => 'ghi', 'Gohir.D07G165675' => 'ghi', 'Gohir.D08G062240' => 'ghi', 'Gohir.D08G086101' => 'ghi', 'Gohir.D08G138060' => 'ghi', 'Gohir.D09G072300' => 'ghi', 'Gohir.D10G041400' => 'ghi', 'Gohir.D11G191020' => 'ghi', 'Gohir.D11G212066' => 'ghi', 'Gohir.D12G036300' => 'ghi', 'Gohir.D12G168600' => 'ghi', 'Gohir.D13G150600' => 'ghi', 'Gorai.001G057300' => 'gra', 'Gorai.002G069900' => 'gra', 'Gorai.002G200000' => 'gra', 'Gorai.003G067600' => 'gra', 'Gorai.005G074800' => 'gra', 'Gorai.006G087300' => 'gra', 'Gorai.008G037500' => 'gra', 'Gorai.008G181400' => 'gra', 'Gorai.009G169400' => 'gra', 'Gorai.009G387900' => 'gra', 'Gorai.010G013300' => 'gra', 'Gorai.010G153800' => 'gra', 'Gorai.010G255800' => 'gra', 'Gorai.011G043700' => 'gra', 'Gorai.011G198900' => 'gra', 'Gorai.013G168400' => 'gra', 'GSVIVG01005212001' => 'vvi', 'GSVIVG01006163001' => 'vvi', 'GSVIVG01009625001' => 'vvi', 'GSVIVG01014338001' => 'vvi', 'GSVIVG01020005001' => 'vvi', 'GSVIVG01021450001' => 'vvi', 'GSVIVG01023975001' => 'vvi', 'GSVIVG01034490001' => 'vvi', 'HanXRQChr04g0112071' => 'han', 'HanXRQChr05g0131151' => 'han', 'HanXRQChr09g0262371' => 'han', 'HanXRQChr09g0268401' => 'han', 'HanXRQChr10g0279241' => 'han', 'HanXRQChr10g0297961' => 'han', 'HanXRQChr11g0326231' => 'han', 'HanXRQChr11g0328471' => 'han', 'HanXRQChr16g0507941' => 'han', 'HanXRQChr17g0560211' => 'han', 'Haze_02108' => 'cav', 'Haze_02428' => 'cav', 'Haze_05593' => 'cav', 'Haze_06448' => 'cav', 'Haze_09427' => 'cav', 'Haze_12022' => 'cav', 'Haze_17612' => 'cav', 'Haze_17928' => 'cav', 'Hma1.2p1_0032F.1_g019250' => 'hma', 'Hma1.2p1_0163F.1_g072690' => 'hma', 'Hma1.2p1_0265F.1_g106710' => 'hma', 'Hma1.2p1_0286F.1_g113970' => 'hma', 'Hma1.2p1_0363F.1_g136640' => 'hma', 'Hma1.2p1_0584F.1_g183470' => 'hma', 'Hma1.2p1_0885F.1_g232570' => 'hma', 'HPP92_006022' => 'vpl', 'HPP92_007320' => 'vpl', 'HPP92_011521' => 'vpl', 'HPP92_019387' => 'vpl', 'HPP92_024038' => 'vpl', 'Hund05891' => 'sun', 'Hund06450' => 'sun', 'Hund12053' => 'sun', 'Hund16800' => 'sun', 'Hund21222' => 'sun', 'Hund22896' => 'sun', 'Hund23746' => 'sun', 'Hund27083' => 'sun', 'Lalb_Chr02g0141831' => 'lal', 'Lalb_Chr02g0141841' => 'lal', 'Lalb_Chr05g0220411' => 'lal', 'Lalb_Chr06g0162081' => 'lal', 'Lalb_Chr09g0327651' => 'lal', 'Lalb_Chr13g0295051' => 'lal', 'Lalb_Chr15g0086801' => 'lal', 'Lalb_Chr16g0383781' => 'lal', 'Lalb_Chr16g0383791' => 'lal', 'Lalb_Chr18g0055441' => 'lal', 'Lalb_Chr18g0059611' => 'lal', 'Lalb_Chr20g0109661' => 'lal', 'Lalb_Chr20g0109831' => 'lal', 'Lalb_Chr20g0121871' => 'lal', 'Lalb_Chr22g0355361' => 'lal', 'Lalb_Chr25g0286371' => 'lal', 'Lj1A1187G43' => 'lonja', 'Lj1A1205T50' => 'lonja', 'Lj1A800G33' => 'lonja', 'Lj1C1187T7' => 'lonja', 'Lj1C843T11' => 'lonja', 'Lj1g0010940' => 'lja', 'Lj2A288T69' => 'lonja', 'Lj3g0024276' => 'lja', 'Lj4A47T76' => 'lonja', 'Lj4g0005805' => 'lja', 'Lj4g0006097' => 'lja', 'Lj4g0008528' => 'lja', 'Lj4g0024907' => 'lja', 'Lj5g0012472' => 'lja', 'Lj5g0018648' => 'lja', 'Lj6C789G1' => 'lonja', 'Lj6g0004000' => 'lja', 'Lj7A292G67' => 'lonja', 'Lj7A292T64' => 'lonja', 'Lj9A400T58' => 'lonja', 'Lsat_1_v5_gn_1_126181' => 'lsa', 'Lsat_1_v5_gn_4_123041' => 'lsa', 'Lsat_1_v5_gn_4_133620' => 'lsa', 'Lsat_1_v5_gn_4_53221' => 'lsa', 'Lsat_1_v5_gn_4_71961' => 'lsa', 'Lsat_1_v5_gn_7_105241' => 'lsa', 'Lsat_1_v5_gn_7_21361' => 'lsa', 'Lsat_1_v5_gn_7_28860' => 'lsa', 'Lsat_1_v5_gn_7_31260' => 'lsa', 'Lsat_1_v5_gn_8_52801' => 'lsa', 'Manes.02G191400' => 'mes', 'Manes.03G110100' => 'mes', 'Manes.04G071100' => 'mes', 'Manes.05G100500' => 'mes', 'Manes.05G164700' => 'mes', 'Manes.15G087000' => 'mes', 'Manes.15G121500' => 'mes', 'Manes.16G028300' => 'mes', 'Manes.17G046100' => 'mes', 'Manes.17G069800' => 'mes', 'Manes.18G100500' => 'mes', 'Mapoly0002s0109' => 'mpo', 'Mapoly0024s0007' => 'mpo', 'Mapoly0089s0032' => 'mpo', 'MBI04_g42241_MAGBIO' => 'mbi', 'MBI05_g11988_MAGBIO' => 'mbi', 'MBI05_g35452_MAGBIO' => 'mbi', 'MBI07_g30179_MAGBIO' => 'mbi', 'MBI07_g35859_MAGBIO' => 'mbi', 'MBI07_g35860_MAGBIO' => 'mbi', 'MBI07_g37166_MAGBIO' => 'mbi', 'MBI08_g18172_MAGBIO' => 'mbi', 'MBI09_g08441_MAGBIO' => 'mbi', 'MBI13_g01676_MAGBIO' => 'mbi', 'MBI14_g42955_MAGBIO' => 'mbi', 'MBI16_g13161_MAGBIO' => 'mbi', 'MBI17_g27204_MAGBIO' => 'mbi', 'MBI19_g21595_MAGBIO' => 'mbi', 'MD00G1148400' => 'mdo', 'MD02G1301200' => 'mdo', 'MD03G1227800' => 'mdo', 'MD05G1041100' => 'mdo', 'MD05G1124800' => 'mdo', 'MD05G1284000' => 'mdo', 'MD05G1338800' => 'mdo', 'MD05G1338900' => 'mdo', 'MD07G1022800' => 'mdo', 'MD10G1047500' => 'mdo', 'MD10G1127500' => 'mdo', 'MD10G1262300' => 'mdo', 'MD10G1293800' => 'mdo', 'MD16G1074300' => 'mdo', 'Medtr1g021670' => 'mtr', 'Medtr1g096320' => 'mtr', 'Medtr2g013690' => 'mtr', 'Medtr2g019450' => 'mtr', 'Medtr2g085170' => 'mtr', 'Medtr4g088785' => 'mtr', 'Medtr8g055930' => 'mtr', 'Medtr8g085850' => 'mtr', 'MELO3C002605.2' => 'cme', 'MELO3C003891.2' => 'cme', 'MELO3C004012.2' => 'cme', 'MELO3C007134.2' => 'cme', 'MELO3C008118.2' => 'cme', 'MELO3C016700.2' => 'cme', 'MELO3C024127.2' => 'cme', 'MELO3C033361.2' => 'cme', 'MELO3C033362.2' => 'cme', 'Migut.C00430' => 'egut', 'Migut.C01246' => 'egut', 'Migut.E00101' => 'egut', 'Migut.H01486' => 'egut', 'Migut.H01939' => 'egut', 'Migut.K00360' => 'egut', 'Migut.M00910' => 'egut', 'Migut.M01139' => 'egut', 'Migut.N02677' => 'egut', 'MSTRG.13252' => 'ama', 'MSTRG.14701' => 'ama', 'MSTRG.1521' => 'ama', 'MSTRG.15884' => 'ama', 'MSTRG.16242' => 'ama', 'MSTRG.22285' => 'ama', 'MSTRG.22444' => 'ama', 'MSTRG.2349' => 'ama', 'MSTRG.26308' => 'ama', 'MSTRG.28296' => 'ama', 'MSTRG.9895' => 'ama', 'Nitab4.5_0000110g0060' => 'nta', 'Nitab4.5_0000420g0130' => 'nta', 'Nitab4.5_0000422g0030' => 'nta', 'Nitab4.5_0000560g0180' => 'nta', 'Nitab4.5_0000703g0100' => 'nta', 'Nitab4.5_0000786g0200' => 'nta', 'Nitab4.5_0001336g0020' => 'nta', 'Nitab4.5_0001796g0030' => 'nta', 'Nitab4.5_0003348g0060' => 'nta', 'Nitab4.5_0003698g0040' => 'nta', 'Nitab4.5_0003942g0090' => 'nta', 'Nitab4.5_0004775g0070' => 'nta', 'Nitab4.5_0004864g0030' => 'nta', 'Nitab4.5_0005615g0020' => 'nta', 'Nitab4.5_0009288g0030' => 'nta', 'Nitab4.5_0009341g0010' => 'nta', 'Nitab4.5_0009535g0010' => 'nta', 'Nn1g03995' => 'nnu', 'Nn1g04100' => 'nnu', 'Nn1g06530' => 'nnu', 'Nn3g16404' => 'nnu', 'Nn3g17212' => 'nnu', 'Nn3g20776' => 'nnu', 'Nn3g21923' => 'nnu', 'Nn5g27737' => 'nnu', 'Nn5g29461' => 'nnu', 'Nn7g38355' => 'nnu', 'Nn8g39873' => 'nnu', 'Oeu000548.2' => 'oeu', 'Oeu004672.1' => 'oeu', 'Oeu015605.2' => 'oeu', 'Oeu016092.1' => 'oeu', 'Oeu017879.3' => 'oeu', 'Oeu024910.1' => 'oeu', 'Oeu028965.1' => 'oeu', 'Oeu031269.1' => 'oeu', 'Oeu031270.1' => 'oeu', 'Oeu032535.1' => 'oeu', 'Oeu034151.1' => 'oeu', 'Oeu034152.1' => 'oeu', 'Oeu034588.2' => 'oeu', 'Oeu050846.1' => 'oeu', 'Oeu050849.2' => 'oeu', 'Oeu051063.2' => 'oeu', 'Oeu052368.1' => 'oeu', 'Oeu052370.1' => 'oeu', 'Os01g0210400' => 'osa', 'Os01g0304300' => 'osa', 'Os01g0749100' => 'osa', 'Os02g0745800' => 'osa', 'Os03g0769050' => 'osa', 'Os05g0531500' => 'osa', 'Os06g0724300' => 'osa', 'Os11g0198100' => 'osa', 'Peaxi162Scf00069g01425' => 'pax', 'Peaxi162Scf00280g00811' => 'pax', 'Peaxi162Scf00310g00615' => 'pax', 'Peaxi162Scf00362g00542' => 'pax', 'Peaxi162Scf00461g00310' => 'pax', 'Peaxi162Scf00530g00118' => 'pax', 'Peaxi162Scf00541g00057' => 'pax', 'Peaxi162Scf00661g00017' => 'pax', 'Peaxi162Scf00926g00027' => 'pax', 'Peaxi162Scf01064g00263' => 'pax', 'Peaxi162Scf01211g00135' => 'pax', 'PGR004G2336' => 'pgr', 'PGR042G0327' => 'pgr', 'PGR042G1957' => 'pgr', 'PGR042G2003' => 'pgr', 'PGR042G3929' => 'pgr', 'PGR083G1137' => 'pgr', 'PGR083G1364' => 'pgr', 'PGSC0003DMG400003381' => 'stu', 'PGSC0003DMG400003417' => 'stu', 'PGSC0003DMG400008981' => 'stu', 'PGSC0003DMG400012417' => 'stu', 'PGSC0003DMG400012823' => 'stu', 'PGSC0003DMG400016885' => 'stu', 'PGSC0003DMG400022812' => 'stu', 'PGSC0003DMG400029726' => 'stu', 'PGSC0003DMG401009243' => 'stu', 'PGSC0003DMG401031505' => 'stu', 'PGSC0003DMG402031505' => 'stu', 'Phvul.001G017600' => 'pvu', 'Phvul.002G193500' => 'pvu', 'Phvul.002G228900' => 'pvu', 'Phvul.002G236800' => 'pvu', 'Phvul.003G049500' => 'pvu', 'Phvul.005G072000' => 'pvu', 'Phvul.006G164800' => 'pvu', 'Phvul.006G185100' => 'pvu', 'Phvul.007G090000' => 'pvu', 'Potri.001G399800' => 'ptr', 'Potri.002G149900' => 'ptr', 'Potri.004G044100' => 'ptr', 'Potri.004G177600' => 'ptr', 'Potri.009G138000' => 'ptr', 'Potri.010G094000' => 'ptr', 'Potri.011G053000' => 'ptr', 'Potri.011G119300' => 'ptr', 'Potri.013G113700' => 'ptr', 'Potri.018G107800' => 'ptr', 'Potri.019G084100' => 'ptr', 'Pp3c14_23720' => 'ppa', 'Pp3c16_6340' => 'ppa', 'Pp3c23_13420' => 'ppa', 'Pp3c24_2740' => 'ppa', 'Pp3c25_860' => 'ppa', 'Pp3c8_21750' => 'ppa', 'Prupe.1G273000' => 'ppe', 'Prupe.1G273700' => 'ppe', 'Prupe.1G274100' => 'ppe', 'Prupe.2G023300' => 'ppe', 'Prupe.4G048000' => 'ppe', 'Prupe.4G080400' => 'ppe', 'Prupe.4G181200' => 'ppe', 'Prupe.8G056900' => 'ppe', 'Prupe.8G168700' => 'ppe', 'Psat1g189080' => 'psa', 'Psat1g204760' => 'psa', 'Psat4g175560' => 'psa', 'Psat4g177720' => 'psa', 'Psat5g244240' => 'psa', 'Psat6g010720' => 'psa', 'Psat6g187200' => 'psa', 'Psat7g072040' => 'psa', 'PSO017G3501' => 'pso', 'PSO063G2148' => 'pso', 'PSO063G5608' => 'pso', 'PSO210G6392' => 'pso', 'PSO541G2319' => 'pso', 'PSO541G2836' => 'pso', 'PSO541G4012' => 'pso', 'PSO541G6253' => 'pso', 'PSO675G0580' => 'pso', 'PSO675G0856' => 'pso', 'PSO675G5635' => 'pso', 'PSO675G9157' => 'pso', 'PSO832G1660' => 'pso', 'PSO832G1969' => 'pso', 'QL02p007186' => 'qlo', 'QL02p033904' => 'qlo', 'QL03p064391' => 'qlo', 'QL05p040593' => 'qlo', 'QL05p058242' => 'qlo', 'QL08p021825' => 'qlo', 'QL11p004981' => 'qlo', 'RcHm_v2.0_Chr1g0318301' => 'rch', 'RcHm_v2.0_Chr4g0418501' => 'rch', 'RcHm_v2.0_Chr4g0439971' => 'rch', 'RcHm_v2.0_Chr5g0008541' => 'rch', 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'SHI01741' => 'shi', 'SHI05771' => 'shi', 'SHI18077' => 'shi', 'SHI20525' => 'shi', 'SHI20527' => 'shi', 'SHI20528' => 'shi', 'SMO172G0185' => 'smo', 'SMO198G0020' => 'smo', 'SMO351G0006' => 'smo', 'SMO356G0118' => 'smo', 'SMO358G0296' => 'smo', 'SMO367G0079' => 'smo', 'SMO367G1277' => 'smo', 'Solyc01g014220.3' => 'sly', 'Solyc01g111770.2' => 'sly', 'Solyc02g078180.3' => 'sly', 'Solyc03g006430.3' => 'sly', 'Solyc03g006456.1' => 'sly', 'Solyc03g079860.2' => 'sly', 'Solyc04g079770.3' => 'sly', 'Solyc05g007430.4' => 'sly', 'Solyc07g063150.3' => 'sly', 'Solyc08g016620.3' => 'sly', 'Solyc09g057590.3' => 'sly', 'Solyc09g057600.1' => 'sly', 'Solyc10g009050.3' => 'sly', 'Solyc11g017420.2' => 'sly', 'Sopen01g053810' => 'spe', 'Sopen02g023040' => 'spe', 'Sopen03g002440' => 'spe', 'Sopen04g033350' => 'spe', 'Sopen05g003310' => 'spe', 'Sopen07g004050' => 'spe', 'Sopen07g031340' => 'spe', 'Sopen08g006990' => 'spe', 'Sopen10g004830' => 'spe', 'Sopen11g009370' => 'spe', 'Sp1g24450' => 'spa', 'Sp1g29670' => 'spa', 'Sp1g39600' => 'spa', 'Sp2g11080' => 'spa', 'Sp2g13970' => 'spa', 'Sp4g16130' => 'spa', 'Sp6g13080' => 'spa', 'Sp7g37270' => 'spa', 'TAR371G0065' => 'tar', 'TAR376G0340' => 'tar', 'TAR376G0435' => 'tar', 'TAR381G0002' => 'tar', 'TAR381G1236' => 'tar', 'TAR624G0055' => 'tar', 'TAR624G0324' => 'tar', 'TAR624G0696' => 'tar', 'TAR624G0906' => 'tar', 'TAR625G0107' => 'tar', 'TAR626G0015' => 'tar', 'TAR626G1356' => 'tar', 'TAR627G0888' => 'tar', 'TAR628G0399' => 'tar', 'TAR628G1327' => 'tar', 'TAR629G2831' => 'tar', 'TAR629G2874' => 'tar', 'TAR633G1432' => 'tar', 'TAR633G2771' => 'tar', 'THA.LOC104803394' => 'tha', 'THA.LOC104805153' => 'tha', 'THA.LOC104806784' => 'tha', 'THA.LOC104810473' => 'tha', 'THA.LOC104813100' => 'tha', 'THA.LOC104814215' => 'tha', 'THA.LOC104815554' => 'tha', 'THA.LOC104820544' => 'tha', 'THA.LOC104824754' => 'tha', 'THA.LOC104827717' => 'tha', 'Thecc.02G031400' => 'tca', 'Thecc.02G055900' => 'tca', 'Thecc.02G350800' => 'tca', 'Thecc.06G150900' => 'tca', 'Thecc.06G186600' => 'tca', 'Thecc.07G089600' => 'tca', 'Thecc.08G020400' => 'tca', 'Thecc.08G182100' => 'tca', 'Thhalv10000873m.g' => 'esa', 'Thhalv10004185m.g' => 'esa', 'Thhalv10006981m.g' => 'esa', 'Thhalv10007204m.g' => 'esa', 'Thhalv10011374m.g' => 'esa', 'Thhalv10013482m.g' => 'esa', 'Thhalv10017801m.g' => 'esa', 'Thhalv10024983m.g' => 'esa', 'TPR.G12072' => 'tpr', 'TPR.G15769' => 'tpr', 'TPR.G16504' => 'tpr', 'TPR.G16506' => 'tpr', 'TPR.G24345' => 'tpr', 'TPR.G26666' => 'tpr', 'TPR.G27320' => 'tpr', 'TPR.G31819' => 'tpr', 'TPR.G38879' => 'tpr', 'TPR.G39015' => 'tpr', 'TPR.G8819' => 'tpr', 'TWI09G0924' => 'twi', 'TWI12G0811' => 'twi', 'TWI12G1294' => 'twi', 'TWI31G0150' => 'twi', 'TWI36G1262' => 'twi', 'TWI38G1287' => 'twi', 'TWI38G1633' => 'twi', 'TWI38G1982' => 'twi', 'TWI39G0116' => 'twi', 'TWI60G1011' => 'twi', 'TWI63G0171' => 'twi', 'TWI73G0839' => 'twi', 'TWI79G1511' => 'twi', 'unitig_0.g915' => 'ugi', 'unitig_0.g916' => 'ugi', 'unitig_21.g20219' => 'ugi', 'unitig_21.g20416' => 'ugi', 'unitig_578.g16132' => 'ugi', 'unitig_578.g16718' => 'ugi', 'unitig_62.g23481' => 'ugi', 'unitig_744.g24535' => 'ugi', 'unitig_749.g13525' => 'ugi', 'vmacro01248' => 'vma', 'vmacro02290' => 'vma', 'vmacro10946' => 'vma', 'vmacro11865' => 'vma', 'vmacro12493' => 'vma', 'vmacro17322' => 'vma', 'vmacro21599' => 'vma', 'vmacro23041' => 'vma', 'VMungo0251G0004' => 'vmu', 'VMungo0251G2639' => 'vmu', 'VMungo0251G2967' => 'vmu', 'VMungo0540G0864' => 'vmu', 'VMungo0540G1569' => 'vmu', 'VMungo0647G0317' => 'vmu', 'VMungo0720G1373' => 'vmu', 'VMungo0720G1508' => 'vmu', 'VMungo1080G0485' => 'vmu', 'VMungo1215G3177' => 'vmu', 'Zm00001eb112600' => 'zma', 'Zm00001eb120220' => 'zma', 'Zm00001eb153240' => 'zma', 'Zm00001eb168880' => 'zma', 'Zm00001eb213920' => 'zma', 'Zm00001eb228280' => 'zma', 'Zm00001eb254580' => 'zma', 'Zm00001eb272180' => 'zma', 'Zm00001eb293190' => 'zma', 'Zm00001eb322930' => 'zma', 'Zm00001eb353360' => 'zma', 'Zm00001eb353390' => 'zma', 'Zm00001eb353430' => 'zma', 'Zm00001eb353440' => 'zma', 'Zm00001eb353780' => 'zma' ), 'gf_id' => 'HOM05D000499', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000499' ), 'data_identifier' => 'HOM05D000499', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000499', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1066', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p29780' => 'bna', 'A02p33180' => 'bna', 'A03p16470' => 'bna', 'A03p66010' => 'bna', 'A04p25970' => 'bna', 'A06p01270' => 'bna', 'A06p46080' => 'bna', 'A07p11400' => 'bna', 'A08p01840' => 'bna', 'A08p08230' => 'bna', 'A08p25740' => 'bna', 'A09p32070' => 'bna', 'A09p37830' => 'bna', 'A09p42840' => 'bna', 'A09p42850' => 'bna', 'Aa31LG10G2060' => 'aar', 'Aa31LG2G7410' => 'aar', 'Aa31LG6G10200' => 'aar', 'Aa31LG6G16680' => 'aar', 'Aa31LG6G8470' => 'aar', 'Aa31LG9G12730' => 'aar', 'Aa31LG9G13680' => 'aar', 'Aa31LG9G14920' => 'aar', 'Aa31LG9G6650' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4977' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5467' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3254' => 'aag', 'Actinidia02578' => 'ach', 'Actinidia07693' => 'ach', 'Actinidia08413' => 'ach', 'Actinidia08414' => 'ach', 'Actinidia15289' => 'ach', 'Actinidia19871' => 'ach', 'Actinidia21475' => 'ach', 'Actinidia22576' => 'ach', 'Actinidia28327' => 'ach', 'Actinidia32491' => 'ach', 'Actinidia39463' => 'ach', 'Actinidia39571' => 'ach', 'Ah.01g013750' => 'amhyb', 'Ah.01g023210' => 'amhyb', 'Ah.04g164850' => 'amhyb', 'Ah.05g178060' => 'amhyb', 'Ah.07g204270' => 'amhyb', 'Ah.07g208480' => 'amhyb', 'Ah.09g237410' => 'amhyb', 'Ah.14g089460' => 'amhyb', 'AL1G41790' => 'aly', 'AL1G49050' => 'aly', 'AL1G53810' => 'aly', 'AL1G61400' => 'aly', 'AL4G18580' => 'aly', 'AL5G12510' => 'aly', 'AL5G12540' => 'aly', 'AL6G43230' => 'aly', 'AL7G10370' => 'aly', 'AL7G19250' => 'aly', 'AL8G12240' => 'aly', 'AL8G18540' => 'aly', 'Aqoxy1G02409' => 'aox', 'Aqoxy2G03993' => 'aox', 'Aqoxy3G03357' => 'aox', 'Aqoxy4G00785' => 'aox', 'Aqoxy5G02598' => 'aox', 'Aqoxy6G00132' => 'aox', 'Aqoxy7G01776' => 'aox', 'Aqoxy7G02316' => 'aox', 'Aqoxy7G03973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.12AFKW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B8730' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27IQR1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3F75VG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3RE0GA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41TCQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.527VTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FIR39' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5W8UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DA38EV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ63HS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H1I32C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HC27T5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4M8AP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7N3CZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9UVDZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LS1NQA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT1D4B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SKC4TM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCFV76' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF9Q1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQWD9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1ZM88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WE07RT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YCK7VH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJE6Q6' => 'arhy', 'AT1G28240' => 'ath', 'AT1G34550' => 'ath', 'AT1G53040' => 'ath', 'AT2G02910' => 'ath', 'AT4G09630' => 'ath', 'AT4G38500' => 'ath', 'AT5G42660' => 'ath', 'AT5G46220' => 'ath', 'ATR0152G026' => 'atr', 'ATR0564G343' => 'atr', 'ATR0706G151' => 'atr', 'ATR0733G207' => 'atr', 'ATR0751G234' => 'atr', 'ATR0807G048' => 'atr', 'ATR1091G084' => 'atr', 'Atru.chr10.1229' => 'acertr', 'Atru.chr10.1230' => 'acertr', 'Atru.chr10.1874' => 'acertr', 'Atru.chr11.1808' => 'acertr', 'Atru.chr13.1795' => 'acertr', 'Atru.chr13.570' => 'acertr', 'Atru.chr2.2608' => 'acertr', 'Atru.chr2.2609' => 'acertr', 'Atru.chr5.3428' => 'acertr', 'Atru.chr8.1171' => 'acertr', 'AUR62004651' => 'cqu', 'AUR62008675' => 'cqu', 'AUR62010014' => 'cqu', 'AUR62013004' => 'cqu', 'AUR62014825' => 'cqu', 'AUR62015015' => 'cqu', 'AUR62015151' => 'cqu', 'AUR62017020' => 'cqu', 'AUR62019422' => 'cqu', 'AUR62023570' => 'cqu', 'AUR62025571' => 'cqu', 'AUR62029098' => 'cqu', 'AUR62033863' => 'cqu', 'AUR62034296' => 'cqu', 'AUR62040075' => 'cqu', 'BcaB02g07334' => 'bca', 'BcaB02g10575' => 'bca', 'BcaB03g12119' => 'bca', 'BcaB03g12120' => 'bca', 'BcaB03g13945' => 'bca', 'BcaB04g17123' => 'bca', 'BcaB04g17867' => 'bca', 'BcaB04g19839' => 'bca', 'BcaB07g30317' => 'bca', 'BcaB07g32432' => 'bca', 'BcaB07g33362' => 'bca', 'BcaB08g36611' => 'bca', 'BcaC01g00028' => 'bca', 'BcaC01g01356' => 'bca', 'BcaC01g02034' => 'bca', 'BcaC01g06051' => 'bca', 'BcaC03g16839' => 'bca', 'BcaC03g17176' => 'bca', 'BcaC05g26829' => 'bca', 'BcaC06g31490' => 'bca', 'BcaC06g35344' => 'bca', 'BcaC06g36570' => 'bca', 'BcaC07g37537' => 'bca', 'BcaC08g43491' => 'bca', 'BcaC08g43773' => 'bca', 'BcaNung00234' => 'bca', 'BcaNung01982' => 'bca', 'BcaNung03707' => 'bca', 'BcaNung06454' => 'bca', 'BolC2t10762H' => 'bol', 'BolC2t11191H' => 'bol', 'BolC3t14322H' => 'bol', 'BolC3t19747H' => 'bol', 'BolC3t21425H' => 'bol', 'BolC4t27800H' => 'bol', 'BolC5t31423H' => 'bol', 'BolC6t35951H' => 'bol', 'BolC6t36282H' => 'bol', 'BolC7t40678H' => 'bol', 'BolC7t40679H' => 'bol', 'BolC7t42222H' => 'bol', 'BolC7t43492H' => 'bol', 'BolC7t46785H' => 'bol', 'BolC8t47853H' => 'bol', 'BolC9t56805H' => 'bol', 'BraA02t08000Z' => 'bra', 'BraA02t08341Z' => 'bra', 'BraA03t10936Z' => 'bra', 'BraA03t15657Z' => 'bra', 'BraA04t18100Z' => 'bra', 'BraA05t20523Z' => 'bra', 'BraA06t23353Z' => 'bra', 'BraA06t27473Z' => 'bra', 'BraA06t27769Z' => 'bra', 'BraA07t28928Z' => 'bra', 'BraA08t32236Z' => 'bra', 'BraA08t32841Z' => 'bra', 'BraA08t34524Z' => 'bra', 'BraA09t38742Z' => 'bra', 'BraA09t39295Z' => 'bra', 'C02p47180' => 'bna', 'C02p50990' => 'bna', 'C03p19360' => 'bna', 'C03p74950' => 'bna', 'C03p91000' => 'bna', 'C04p63260' => 'bna', 'C05p27050' => 'bna', 'C06p08750' => 'bna', 'C06p11490' => 'bna', 'C07p02820' => 'bna', 'C07p17180' => 'bna', 'C07p29440' => 'bna', 'C07p63730' => 'bna', 'C09p39260' => 'bna', 'CAN.G1164.34' => 'can', 'CAN.G1164.39' => 'can', 'CAN.G1530.3' => 'can', 'CAN.G162.61' => 'can', 'CAN.G176.6' => 'can', 'CAN.G289.49' => 'can', 'CAN.G370.21' => 'can', 'CAN.G370.22' => 'can', 'CAN.G371.117' => 'can', 'CAN.G58.37' => 'can', 'CAN.G588.98' => 'can', 'CANSAT21G2266' => 'cansat', 'CANSAT25G2799' => 'cansat', 'CANSAT35G0862' => 'cansat', 'CANSAT35G1704' => 'cansat', 'CANSAT35G1760' => 'cansat', 'CANSAT56G3971' => 'cansat', 'CANSAT56G4116' => 'cansat', 'CANSAT80G1259' => 'cansat', 'CARHR027730' => 'chi', 'CARHR033880' => 'chi', 'CARHR043270' => 'chi', 'CARHR145330' => 'chi', 'CARHR145340' => 'chi', 'CARHR175570' => 'chi', 'CARHR181570' => 'chi', 'CARHR258470' => 'chi', 'CARHR260490' => 'chi', 'CARHR294220' => 'chi', 'Carub.0001s2668' => 'cru', 'Carub.0001s3257' => 'cru', 'Carub.0001s4220' => 'cru', 'Carub.0005s0179' => 'cru', 'Carub.0006s2807' => 'cru', 'Carub.0007s0039' => 'cru', 'Carub.0008s0169' => 'cru', 'Carub.0008s0636' => 'cru', 'Ca_00338_v3' => 'car', 'Ca_00542_v3' => 'car', 'Ca_01844_v3' => 'car', 'Ca_10611_v3' => 'car', 'Ca_13326_v3' => 'car', 'Ca_17944_v3' => 'car', 'Ca_18546_v3' => 'car', 'Ca_24219_v3' => 'car', 'Ca_29972_v3' => 'car', 'CBR_g3681' => 'cbr', 'CBR_g40021' => 'cbr', 'Cc01_g08140' => 'ccan', 'Cc02_g13410' => 'ccan', 'Cc02_g37480' => 'ccan', 'Cc05_g12030' => 'ccan', 'Cc09_g03370' => 'ccan', 'Cc09_g10300' => 'ccan', 'Cc10_g03530' => 'ccan', 'Cc10_g11380' => 'ccan', 'CDE01G0176' => 'cde', 'CDE02G0675' => 'cde', 'CDE02G0942' => 'cde', 'CDE02G1153' => 'cde', 'CDE02G4177' => 'cde', 'CDE04G2117' => 'cde', 'CDE04G2736' => 'cde', 'CDE08G1161' => 'cde', 'CDE09G1238' => 'cde', 'Cfa000467' => 'cfa', 'Cfa000947' => 'cfa', 'Cfa004969' => 'cfa', 'Cfa005284' => 'cfa', 'Cfa008993' => 'cfa', 'Cfa018187' => 'cfa', 'Cfa018454' => 'cfa', 'Cfa020585' => 'cfa', 'Ciclev10000424m.g' => 'ccl', 'Ciclev10003605m.g' => 'ccl', 'Ciclev10007828m.g' => 'ccl', 'Ciclev10014620m.g' => 'ccl', 'Ciclev10015169m.g' => 'ccl', 'Ciclev10018291m.g' => 'ccl', 'Ciclev10028256m.g' => 'ccl', 'Ciclev10033822m.g' => 'ccl', 'CiPaw.05G060300' => 'cil', 'CiPaw.05G085000' => 'cil', 'CiPaw.06G083700' => 'cil', 'CiPaw.06G120300' => 'cil', 'CiPaw.09G060500' => 'cil', 'CiPaw.09G123800' => 'cil', 'CiPaw.11G169700' => 'cil', 'CiPaw.12G118300' => 'cil', 'CiPaw.15G071000' => 'cil', 'CiPaw.15G081900' => 'cil', 'ClCG01G024610' => 'cla', 'ClCG03G006070' => 'cla', 'ClCG05G019250' => 'cla', 'ClCG09G009500' => 'cla', 'ClCG11G008200' => 'cla', 'ClCG11G018080' => 'cla', 'COL.COLO4_17373' => 'col', 'COL.COLO4_22994' => 'col', 'COL.COLO4_26389' => 'col', 'COL.COLO4_27170' => 'col', 'COL.COLO4_31074' => 'col', 'COL.COLO4_31465' => 'col', 'COL.COLO4_36438' => 'col', 'COL.COLO4_36439' => 'col', 'Cpa.g.c38781' => 'cpa', 'Cpa.g.sc128.12' => 'cpa', 'Cpa.g.sc166.7' => 'cpa', 'Cpa.g.sc166.8' => 'cpa', 'Cpa.g.sc20.111' => 'cpa', 'Cpa.g.sc27.31' => 'cpa', 'Cpa.g.sc64.36' => 'cpa', 'Cpa.g.sc64.37' => 'cpa', 'Cpa.g.sc66.49' => 'cpa', 'Cpa.g.sc80.64' => 'cpa', 'CsaV3_1G012320' => 'csa', 'CsaV3_2G008480' => 'csa', 'CsaV3_2G033450' => 'csa', 'CsaV3_3G044830' => 'csa', 'CsaV3_4G033710' => 'csa', 'CsaV3_6G051730' => 'csa', 'CsaV3_7G025350' => 'csa', 'CSS0001067' => 'camsi', 'CSS0005996' => 'camsi', 'CSS0006590' => 'camsi', 'CSS0009673' => 'camsi', 'CSS0010201' => 'camsi', 'CSS0010549' => 'camsi', 'CSS0011364' => 'camsi', 'CSS0014473' => 'camsi', 'CSS0014961' => 'camsi', 'CSS0020191' => 'camsi', 'CSS0021165' => 'camsi', 'CSS0022306' => 'camsi', 'CSS0030591' => 'camsi', 'CSS0030696' => 'camsi', 'CSS0032653' => 'camsi', 'CSS0037487' => 'camsi', 'CSS0041102' => 'camsi', 'CSS0041261' => 'camsi', 'CSS0046246' => 'camsi', 'CSS0049256' => 'camsi', 'DCAR_004075' => 'dca', 'DCAR_011538' => 'dca', 'DCAR_019553' => 'dca', 'DCAR_020952' => 'dca', 'DCAR_021739' => 'dca', 'DCAR_027407' => 'dca', 'DCAR_027913' => 'dca', 'DCAR_028066' => 'dca', 'Dinv05899' => 'din', 'Dinv07563' => 'din', 'Dinv08010' => 'din', 'Dinv14125' => 'din', 'Dinv20172' => 'din', 'Dinv30743' => 'din', 'Dinv31229' => 'din', 'Dinv34162' => 'din', 'Dinv36028' => 'din', 'Dinv39368' => 'din', 'Dinv40565' => 'din', 'Dinv41706' => 'din', 'Duzib052G0089' => 'dzi', 'Duzib116G0641' => 'dzi', 'Duzib132G0069' => 'dzi', 'Duzib132G1219' => 'dzi', 'Duzib147G0278' => 'dzi', 'Duzib160G0480' => 'dzi', 'Duzib170G0661' => 'dzi', 'Duzib177G0591' => 'dzi', 'Duzib187G1353' => 'dzi', 'Duzib192G0858' => 'dzi', 'Duzib192G0883' => 'dzi', 'Duzib213G0506' => 'dzi', 'Duzib235G0289' => 'dzi', 'Duzib251G0422' => 'dzi', 'ECA232G3898' => 'eca', 'ECA233G5950' => 'eca', 'ECA234G1699' => 'eca', 'ECA234G2421' => 'eca', 'ECA236G0426' => 'eca', 'ECA236G4331' => 'eca', 'ECA248G2573' => 'eca', 'EL10Ac1g00077' => 'bvu', 'EL10Ac1g01746' => 'bvu', 'EL10Ac2g03464' => 'bvu', 'EL10Ac4g08176' => 'bvu', 'EL10Ac7g17521' => 'bvu', 'EL10Ac8g20386' => 'bvu', 'EL10Ac9g21343' => 'bvu', 'EL10Ac9g22688' => 'bvu', 'Eucgr.B03434' => 'egr', 'Eucgr.D00618' => 'egr', 'Eucgr.E02395' => 'egr', 'Eucgr.F01129' => 'egr', 'Eucgr.F02622' => 'egr', 'Eucgr.F04207' => 'egr', 'FAN01G0570' => 'fan', 'FAN03G3351' => 'fan', 'FAN06G3702' => 'fan', 'FAN07G2149' => 'fan', 'FAN10G3758' => 'fan', 'FAN11G1170' => 'fan', 'FAN11G2050' => 'fan', 'FAN11G2724' => 'fan', 'FAN12G1700' => 'fan', 'FAN12G2028' => 'fan', 'FAN15G1160' => 'fan', 'FAN15G3063' => 'fan', 'FAN16G2540' => 'fan', 'FAN16G3077' => 'fan', 'FAN16G3624' => 'fan', 'FAN17G0221' => 'fan', 'FAN20G2492' => 'fan', 'FAN20G2905' => 'fan', 'FAN21G0548' => 'fan', 'FAN21G1300' => 'fan', 'FAN22G0077' => 'fan', 'FAN22G1315' => 'fan', 'FAN24G1280' => 'fan', 'FAN24G1445' => 'fan', 'FAN24G3527' => 'fan', 'FAN25G0464' => 'fan', 'FAN25G2885' => 'fan', 'FAN25G3270' => 'fan', 'FAN27G1101' => 'fan', 'FAN27G2846' => 'fan', 'FAN27G3524' => 'fan', 'FvH4_2g11770' => 'fve', 'FvH4_2g15630' => 'fve', 'FvH4_3g05570' => 'fve', 'FvH4_3g09110' => 'fve', 'FvH4_3g19940' => 'fve', 'FvH4_4g04821' => 'fve', 'FvH4_4g31480' => 'fve', 'FvH4_7g01740' => 'fve', 'Glyma.05G130400' => 'gma', 'Glyma.05G156400' => 'gma', 'Glyma.07G197000' => 'gma', 'Glyma.08G085151' => 'gma', 'Glyma.08G114500' => 'gma', 'Glyma.08G300400' => 'gma', 'Glyma.10G215800' => 'gma', 'Glyma.12G224400' => 'gma', 'Glyma.13G179300' => 'gma', 'Glyma.13G218151' => 'gma', 'Glyma.13G238800' => 'gma', 'Glyma.13G276900' => 'gma', 'Glyma.14G078200' => 'gma', 'Glyma.15G074500' => 'gma', 'Glyma.15G094100' => 'gma', 'Glyma.17G247200' => 'gma', 'Glyma.18G120100' => 'gma', 'Glyma.20G176000' => 'gma', 'Gohir.A01G063600' => 'ghi', 'Gohir.A01G170301' => 'ghi', 'Gohir.A02G060500' => 'ghi', 'Gohir.A05G133850' => 'ghi', 'Gohir.A05G161400' => 'ghi', 'Gohir.A06G012900' => 'ghi', 'Gohir.A06G035901' => 'ghi', 'Gohir.A06G127100' => 'ghi', 'Gohir.A06G210500' => 'ghi', 'Gohir.A08G008650' => 'ghi', 'Gohir.A09G072700' => 'ghi', 'Gohir.A09G088301' => 'ghi', 'Gohir.A10G040600' => 'ghi', 'Gohir.A12G036300' => 'ghi', 'Gohir.A12G143350' => 'ghi', 'Gohir.A12G165500' => 'ghi', 'Gohir.A13G145700' => 'ghi', 'Gohir.D01G050000' => 'ghi', 'Gohir.D01G051366' => 'ghi', 'Gohir.D01G161350' => 'ghi', 'Gohir.D02G065900' => 'ghi', 'Gohir.D05G164200' => 'ghi', 'Gohir.D05G355500' => 'ghi', 'Gohir.D06G010400' => 'ghi', 'Gohir.D06G111250' => 'ghi', 'Gohir.D06G132000' => 'ghi', 'Gohir.D06G210500' => 'ghi', 'Gohir.D07G165675' => 'ghi', 'Gohir.D08G062240' => 'ghi', 'Gohir.D08G086101' => 'ghi', 'Gohir.D08G138060' => 'ghi', 'Gohir.D09G072300' => 'ghi', 'Gohir.D10G041400' => 'ghi', 'Gohir.D11G191020' => 'ghi', 'Gohir.D11G212066' => 'ghi', 'Gohir.D12G036300' => 'ghi', 'Gohir.D12G168600' => 'ghi', 'Gohir.D13G150600' => 'ghi', 'Gorai.001G057300' => 'gra', 'Gorai.002G069900' => 'gra', 'Gorai.002G200000' => 'gra', 'Gorai.003G067600' => 'gra', 'Gorai.005G074800' => 'gra', 'Gorai.006G087300' => 'gra', 'Gorai.008G037500' => 'gra', 'Gorai.008G181400' => 'gra', 'Gorai.009G169400' => 'gra', 'Gorai.009G387900' => 'gra', 'Gorai.010G013300' => 'gra', 'Gorai.010G153800' => 'gra', 'Gorai.010G255800' => 'gra', 'Gorai.011G043700' => 'gra', 'Gorai.011G198900' => 'gra', 'Gorai.013G168400' => 'gra', 'GSVIVG01005212001' => 'vvi', 'GSVIVG01006163001' => 'vvi', 'GSVIVG01009625001' => 'vvi', 'GSVIVG01014338001' => 'vvi', 'GSVIVG01020005001' => 'vvi', 'GSVIVG01021450001' => 'vvi', 'GSVIVG01023975001' => 'vvi', 'GSVIVG01034490001' => 'vvi', 'HanXRQChr04g0112071' => 'han', 'HanXRQChr05g0131151' => 'han', 'HanXRQChr09g0262371' => 'han', 'HanXRQChr09g0268401' => 'han', 'HanXRQChr10g0279241' => 'han', 'HanXRQChr10g0297961' => 'han', 'HanXRQChr11g0326231' => 'han', 'HanXRQChr11g0328471' => 'han', 'HanXRQChr16g0507941' => 'han', 'HanXRQChr17g0560211' => 'han', 'Haze_02108' => 'cav', 'Haze_02428' => 'cav', 'Haze_05593' => 'cav', 'Haze_06448' => 'cav', 'Haze_09427' => 'cav', 'Haze_12022' => 'cav', 'Haze_17612' => 'cav', 'Haze_17928' => 'cav', 'Hma1.2p1_0032F.1_g019250' => 'hma', 'Hma1.2p1_0163F.1_g072690' => 'hma', 'Hma1.2p1_0265F.1_g106710' => 'hma', 'Hma1.2p1_0286F.1_g113970' => 'hma', 'Hma1.2p1_0363F.1_g136640' => 'hma', 'Hma1.2p1_0584F.1_g183470' => 'hma', 'Hma1.2p1_0885F.1_g232570' => 'hma', 'HPP92_006022' => 'vpl', 'HPP92_007320' => 'vpl', 'HPP92_011521' => 'vpl', 'HPP92_019387' => 'vpl', 'HPP92_024038' => 'vpl', 'Hund05891' => 'sun', 'Hund06450' => 'sun', 'Hund12053' => 'sun', 'Hund16800' => 'sun', 'Hund21222' => 'sun', 'Hund22896' => 'sun', 'Hund23746' => 'sun', 'Hund27083' => 'sun', 'Lalb_Chr02g0141831' => 'lal', 'Lalb_Chr02g0141841' => 'lal', 'Lalb_Chr05g0220411' => 'lal', 'Lalb_Chr06g0162081' => 'lal', 'Lalb_Chr09g0327651' => 'lal', 'Lalb_Chr13g0295051' => 'lal', 'Lalb_Chr15g0086801' => 'lal', 'Lalb_Chr16g0383781' => 'lal', 'Lalb_Chr16g0383791' => 'lal', 'Lalb_Chr18g0055441' => 'lal', 'Lalb_Chr18g0059611' => 'lal', 'Lalb_Chr20g0109661' => 'lal', 'Lalb_Chr20g0109831' => 'lal', 'Lalb_Chr20g0121871' => 'lal', 'Lalb_Chr22g0355361' => 'lal', 'Lalb_Chr25g0286371' => 'lal', 'Lj1A1187G43' => 'lonja', 'Lj1A1205T50' => 'lonja', 'Lj1A800G33' => 'lonja', 'Lj1C1187T7' => 'lonja', 'Lj1C843T11' => 'lonja', 'Lj1g0010940' => 'lja', 'Lj2A288T69' => 'lonja', 'Lj3g0024276' => 'lja', 'Lj4A47T76' => 'lonja', 'Lj4g0005805' => 'lja', 'Lj4g0006097' => 'lja', 'Lj4g0008528' => 'lja', 'Lj4g0024907' => 'lja', 'Lj5g0012472' => 'lja', 'Lj5g0018648' => 'lja', 'Lj6C789G1' => 'lonja', 'Lj6g0004000' => 'lja', 'Lj7A292G67' => 'lonja', 'Lj7A292T64' => 'lonja', 'Lj9A400T58' => 'lonja', 'Lsat_1_v5_gn_1_126181' => 'lsa', 'Lsat_1_v5_gn_4_123041' => 'lsa', 'Lsat_1_v5_gn_4_133620' => 'lsa', 'Lsat_1_v5_gn_4_53221' => 'lsa', 'Lsat_1_v5_gn_4_71961' => 'lsa', 'Lsat_1_v5_gn_7_105241' => 'lsa', 'Lsat_1_v5_gn_7_21361' => 'lsa', 'Lsat_1_v5_gn_7_28860' => 'lsa', 'Lsat_1_v5_gn_7_31260' => 'lsa', 'Lsat_1_v5_gn_8_52801' => 'lsa', 'Manes.02G191400' => 'mes', 'Manes.03G110100' => 'mes', 'Manes.04G071100' => 'mes', 'Manes.05G100500' => 'mes', 'Manes.05G164700' => 'mes', 'Manes.15G087000' => 'mes', 'Manes.15G121500' => 'mes', 'Manes.16G028300' => 'mes', 'Manes.17G046100' => 'mes', 'Manes.17G069800' => 'mes', 'Manes.18G100500' => 'mes', 'Mapoly0002s0109' => 'mpo', 'Mapoly0024s0007' => 'mpo', 'Mapoly0089s0032' => 'mpo', 'MBI04_g42241_MAGBIO' => 'mbi', 'MBI05_g11988_MAGBIO' => 'mbi', 'MBI05_g35452_MAGBIO' => 'mbi', 'MBI07_g30179_MAGBIO' => 'mbi', 'MBI07_g35859_MAGBIO' => 'mbi', 'MBI07_g35860_MAGBIO' => 'mbi', 'MBI07_g37166_MAGBIO' => 'mbi', 'MBI08_g18172_MAGBIO' => 'mbi', 'MBI09_g08441_MAGBIO' => 'mbi', 'MBI13_g01676_MAGBIO' => 'mbi', 'MBI14_g42955_MAGBIO' => 'mbi', 'MBI16_g13161_MAGBIO' => 'mbi', 'MBI17_g27204_MAGBIO' => 'mbi', 'MBI19_g21595_MAGBIO' => 'mbi', 'MD00G1148400' => 'mdo', 'MD02G1301200' => 'mdo', 'MD03G1227800' => 'mdo', 'MD05G1041100' => 'mdo', 'MD05G1124800' => 'mdo', 'MD05G1284000' => 'mdo', 'MD05G1338800' => 'mdo', 'MD05G1338900' => 'mdo', 'MD07G1022800' => 'mdo', 'MD10G1047500' => 'mdo', 'MD10G1127500' => 'mdo', 'MD10G1262300' => 'mdo', 'MD10G1293800' => 'mdo', 'MD16G1074300' => 'mdo', 'Medtr1g021670' => 'mtr', 'Medtr1g096320' => 'mtr', 'Medtr2g013690' => 'mtr', 'Medtr2g019450' => 'mtr', 'Medtr2g085170' => 'mtr', 'Medtr4g088785' => 'mtr', 'Medtr8g055930' => 'mtr', 'Medtr8g085850' => 'mtr', 'MELO3C002605.2' => 'cme', 'MELO3C003891.2' => 'cme', 'MELO3C004012.2' => 'cme', 'MELO3C007134.2' => 'cme', 'MELO3C008118.2' => 'cme', 'MELO3C016700.2' => 'cme', 'MELO3C024127.2' => 'cme', 'MELO3C033361.2' => 'cme', 'MELO3C033362.2' => 'cme', 'Migut.C00430' => 'egut', 'Migut.C01246' => 'egut', 'Migut.E00101' => 'egut', 'Migut.H01486' => 'egut', 'Migut.H01939' => 'egut', 'Migut.K00360' => 'egut', 'Migut.M00910' => 'egut', 'Migut.M01139' => 'egut', 'Migut.N02677' => 'egut', 'MSTRG.13252' => 'ama', 'MSTRG.14701' => 'ama', 'MSTRG.1521' => 'ama', 'MSTRG.15884' => 'ama', 'MSTRG.16242' => 'ama', 'MSTRG.22285' => 'ama', 'MSTRG.22444' => 'ama', 'MSTRG.2349' => 'ama', 'MSTRG.26308' => 'ama', 'MSTRG.28296' => 'ama', 'MSTRG.9895' => 'ama', 'Nitab4.5_0000110g0060' => 'nta', 'Nitab4.5_0000420g0130' => 'nta', 'Nitab4.5_0000422g0030' => 'nta', 'Nitab4.5_0000560g0180' => 'nta', 'Nitab4.5_0000703g0100' => 'nta', 'Nitab4.5_0000786g0200' => 'nta', 'Nitab4.5_0001336g0020' => 'nta', 'Nitab4.5_0001796g0030' => 'nta', 'Nitab4.5_0003348g0060' => 'nta', 'Nitab4.5_0003698g0040' => 'nta', 'Nitab4.5_0003942g0090' => 'nta', 'Nitab4.5_0004775g0070' => 'nta', 'Nitab4.5_0004864g0030' => 'nta', 'Nitab4.5_0005615g0020' => 'nta', 'Nitab4.5_0009288g0030' => 'nta', 'Nitab4.5_0009341g0010' => 'nta', 'Nitab4.5_0009535g0010' => 'nta', 'Nn1g03995' => 'nnu', 'Nn1g04100' => 'nnu', 'Nn1g06530' => 'nnu', 'Nn3g16404' => 'nnu', 'Nn3g17212' => 'nnu', 'Nn3g20776' => 'nnu', 'Nn3g21923' => 'nnu', 'Nn5g27737' => 'nnu', 'Nn5g29461' => 'nnu', 'Nn7g38355' => 'nnu', 'Nn8g39873' => 'nnu', 'Oeu000548.2' => 'oeu', 'Oeu004672.1' => 'oeu', 'Oeu015605.2' => 'oeu', 'Oeu016092.1' => 'oeu', 'Oeu017879.3' => 'oeu', 'Oeu024910.1' => 'oeu', 'Oeu028965.1' => 'oeu', 'Oeu031269.1' => 'oeu', 'Oeu031270.1' => 'oeu', 'Oeu032535.1' => 'oeu', 'Oeu034151.1' => 'oeu', 'Oeu034152.1' => 'oeu', 'Oeu034588.2' => 'oeu', 'Oeu050846.1' => 'oeu', 'Oeu050849.2' => 'oeu', 'Oeu051063.2' => 'oeu', 'Oeu052368.1' => 'oeu', 'Oeu052370.1' => 'oeu', 'Os01g0210400' => 'osa', 'Os01g0304300' => 'osa', 'Os01g0749100' => 'osa', 'Os02g0745800' => 'osa', 'Os03g0769050' => 'osa', 'Os05g0531500' => 'osa', 'Os06g0724300' => 'osa', 'Os11g0198100' => 'osa', 'Peaxi162Scf00069g01425' => 'pax', 'Peaxi162Scf00280g00811' => 'pax', 'Peaxi162Scf00310g00615' => 'pax', 'Peaxi162Scf00362g00542' => 'pax', 'Peaxi162Scf00461g00310' => 'pax', 'Peaxi162Scf00530g00118' => 'pax', 'Peaxi162Scf00541g00057' => 'pax', 'Peaxi162Scf00661g00017' => 'pax', 'Peaxi162Scf00926g00027' => 'pax', 'Peaxi162Scf01064g00263' => 'pax', 'Peaxi162Scf01211g00135' => 'pax', 'PGR004G2336' => 'pgr', 'PGR042G0327' => 'pgr', 'PGR042G1957' => 'pgr', 'PGR042G2003' => 'pgr', 'PGR042G3929' => 'pgr', 'PGR083G1137' => 'pgr', 'PGR083G1364' => 'pgr', 'PGSC0003DMG400003381' => 'stu', 'PGSC0003DMG400003417' => 'stu', 'PGSC0003DMG400008981' => 'stu', 'PGSC0003DMG400012417' => 'stu', 'PGSC0003DMG400012823' => 'stu', 'PGSC0003DMG400016885' => 'stu', 'PGSC0003DMG400022812' => 'stu', 'PGSC0003DMG400029726' => 'stu', 'PGSC0003DMG401009243' => 'stu', 'PGSC0003DMG401031505' => 'stu', 'PGSC0003DMG402031505' => 'stu', 'Phvul.001G017600' => 'pvu', 'Phvul.002G193500' => 'pvu', 'Phvul.002G228900' => 'pvu', 'Phvul.002G236800' => 'pvu', 'Phvul.003G049500' => 'pvu', 'Phvul.005G072000' => 'pvu', 'Phvul.006G164800' => 'pvu', 'Phvul.006G185100' => 'pvu', 'Phvul.007G090000' => 'pvu', 'Potri.001G399800' => 'ptr', 'Potri.002G149900' => 'ptr', 'Potri.004G044100' => 'ptr', 'Potri.004G177600' => 'ptr', 'Potri.009G138000' => 'ptr', 'Potri.010G094000' => 'ptr', 'Potri.011G053000' => 'ptr', 'Potri.011G119300' => 'ptr', 'Potri.013G113700' => 'ptr', 'Potri.018G107800' => 'ptr', 'Potri.019G084100' => 'ptr', 'Pp3c14_23720' => 'ppa', 'Pp3c16_6340' => 'ppa', 'Pp3c23_13420' => 'ppa', 'Pp3c24_2740' => 'ppa', 'Pp3c25_860' => 'ppa', 'Pp3c8_21750' => 'ppa', 'Prupe.1G273000' => 'ppe', 'Prupe.1G273700' => 'ppe', 'Prupe.1G274100' => 'ppe', 'Prupe.2G023300' => 'ppe', 'Prupe.4G048000' => 'ppe', 'Prupe.4G080400' => 'ppe', 'Prupe.4G181200' => 'ppe', 'Prupe.8G056900' => 'ppe', 'Prupe.8G168700' => 'ppe', 'Psat1g189080' => 'psa', 'Psat1g204760' => 'psa', 'Psat4g175560' => 'psa', 'Psat4g177720' => 'psa', 'Psat5g244240' => 'psa', 'Psat6g010720' => 'psa', 'Psat6g187200' => 'psa', 'Psat7g072040' => 'psa', 'PSO017G3501' => 'pso', 'PSO063G2148' => 'pso', 'PSO063G5608' => 'pso', 'PSO210G6392' => 'pso', 'PSO541G2319' => 'pso', 'PSO541G2836' => 'pso', 'PSO541G4012' => 'pso', 'PSO541G6253' => 'pso', 'PSO675G0580' => 'pso', 'PSO675G0856' => 'pso', 'PSO675G5635' => 'pso', 'PSO675G9157' => 'pso', 'PSO832G1660' => 'pso', 'PSO832G1969' => 'pso', 'QL02p007186' => 'qlo', 'QL02p033904' => 'qlo', 'QL03p064391' => 'qlo', 'QL05p040593' => 'qlo', 'QL05p058242' => 'qlo', 'QL08p021825' => 'qlo', 'QL11p004981' => 'qlo', 'RcHm_v2.0_Chr1g0318301' => 'rch', 'RcHm_v2.0_Chr4g0418501' => 'rch', 'RcHm_v2.0_Chr4g0439971' => 'rch', 'RcHm_v2.0_Chr5g0008541' => 'rch', 'RcHm_v2.0_Chr5g0014101' => 'rch', 'RcHm_v2.0_Chr5g0014131' => 'rch', 'RcHm_v2.0_Chr5g0033621' => 'rch', 'RcHm_v2.0_Chr6g0272041' => 'rch', 'RcHm_v2.0_Chr6g0278831' => 'rch', 'Rhsim02G0130400' => 'rsi', 'Rhsim02G0171100' => 'rsi', 'Rhsim05G0053000' => 'rsi', 'Rhsim05G0053100' => 'rsi', 'Rhsim06G0096500' => 'rsi', 'Rhsim06G0096600' => 'rsi', 'Rhsim06G0199100' => 'rsi', 'Rhsim12G0062300' => 'rsi', 'Rhsim12G0062800' => 'rsi', 'Sabra02G0118600' => 'sbr', 'Sabra04G0027300' => 'sbr', 'Sabra04G0119500' => 'sbr', 'Sabra08G0112500' => 'sbr', 'Sabra11G0036800' => 'sbr', 'Sabra11G0103800' => 'sbr', 'Sabra13G0096300' => 'sbr', 'Sabra16G0262300' => 'sbr', 'Sabra18G0091700' => 'sbr', 'Sabra19G0095400' => 'sbr', 'SalBow6G3080' => 'sbo', 'SalBow7G1157' => 'sbo', 'SalBow7G2123' => 'sbo', 'SalBow7G2285' => 'sbo', 'SalBow7G3537' => 'sbo', 'SalBow8G2947' => 'sbo', 'SalBow8G4463' => 'sbo', 'SalBow8G5466' => 'sbo', 'Sc01g0001750' => 'sci', 'Sc02g0006640' => 'sci', 'Sc02g0006670' => 'sci', 'Sc04g0008220' => 'sci', 'Sc05g0006190' => 'sci', 'Sc08g0002760' => 'sci', 'Sc17g0006170' => 'sci', 'Sc22g0002050' => 'sci', 'Sc23g0001190' => 'sci', 'Sc24g0000980' => 'sci', 'Sed0006245' => 'sed', 'Sed0007543' => 'sed', 'Sed0009411' => 'sed', 'Sed0010765' => 'sed', 'Sed0012944' => 'sed', 'Sed0014682' => 'sed', 'Sed0016174' => 'sed', 'Sed0016796' => 'sed', 'Sed0020317' => 'sed', 'Sed0021467' => 'sed', 'SEGI_01316' => 'sgi', 'SEGI_03374' => 'sgi', 'SEGI_16265' => 'sgi', 'SEGI_18569' => 'sgi', 'SEGI_20351' => 'sgi', 'SEGI_26395' => 'sgi', 'SEGI_29469' => 'sgi', 'SEGI_34771' => 'sgi', 'SEGI_36769' => 'sgi', 'SEGI_37139' => 'sgi', 'SGA_v2.0_scaffold100G29687' => 'sas', 'SGA_v2.0_scaffold118G32472' => 'sas', 'SGA_v2.0_scaffold14G07051' => 'sas', 'SGA_v2.0_scaffold183G39845' => 'sas', 'SGA_v2.0_scaffold1G00174' => 'sas', 'SGA_v2.0_scaffold22G09714' => 'sas', 'SGA_v2.0_scaffold333G48992' => 'sas', 'SGA_v2.0_scaffold46G17491' => 'sas', 'SGA_v2.0_scaffold49G18294' => 'sas', 'SGA_v2.0_scaffold63G21658' => 'sas', 'SHI01741' => 'shi', 'SHI05771' => 'shi', 'SHI18077' => 'shi', 'SHI20525' => 'shi', 'SHI20527' => 'shi', 'SHI20528' => 'shi', 'SMO172G0185' => 'smo', 'SMO198G0020' => 'smo', 'SMO351G0006' => 'smo', 'SMO356G0118' => 'smo', 'SMO358G0296' => 'smo', 'SMO367G0079' => 'smo', 'SMO367G1277' => 'smo', 'Solyc01g014220.3' => 'sly', 'Solyc01g111770.2' => 'sly', 'Solyc02g078180.3' => 'sly', 'Solyc03g006430.3' => 'sly', 'Solyc03g006456.1' => 'sly', 'Solyc03g079860.2' => 'sly', 'Solyc04g079770.3' => 'sly', 'Solyc05g007430.4' => 'sly', 'Solyc07g063150.3' => 'sly', 'Solyc08g016620.3' => 'sly', 'Solyc09g057590.3' => 'sly', 'Solyc09g057600.1' => 'sly', 'Solyc10g009050.3' => 'sly', 'Solyc11g017420.2' => 'sly', 'Sopen01g053810' => 'spe', 'Sopen02g023040' => 'spe', 'Sopen03g002440' => 'spe', 'Sopen04g033350' => 'spe', 'Sopen05g003310' => 'spe', 'Sopen07g004050' => 'spe', 'Sopen07g031340' => 'spe', 'Sopen08g006990' => 'spe', 'Sopen10g004830' => 'spe', 'Sopen11g009370' => 'spe', 'Sp1g24450' => 'spa', 'Sp1g29670' => 'spa', 'Sp1g39600' => 'spa', 'Sp2g11080' => 'spa', 'Sp2g13970' => 'spa', 'Sp4g16130' => 'spa', 'Sp6g13080' => 'spa', 'Sp7g37270' => 'spa', 'TAR371G0065' => 'tar', 'TAR376G0340' => 'tar', 'TAR376G0435' => 'tar', 'TAR381G0002' => 'tar', 'TAR381G1236' => 'tar', 'TAR624G0055' => 'tar', 'TAR624G0324' => 'tar', 'TAR624G0696' => 'tar', 'TAR624G0906' => 'tar', 'TAR625G0107' => 'tar', 'TAR626G0015' => 'tar', 'TAR626G1356' => 'tar', 'TAR627G0888' => 'tar', 'TAR628G0399' => 'tar', 'TAR628G1327' => 'tar', 'TAR629G2831' => 'tar', 'TAR629G2874' => 'tar', 'TAR633G1432' => 'tar', 'TAR633G2771' => 'tar', 'THA.LOC104803394' => 'tha', 'THA.LOC104805153' => 'tha', 'THA.LOC104806784' => 'tha', 'THA.LOC104810473' => 'tha', 'THA.LOC104813100' => 'tha', 'THA.LOC104814215' => 'tha', 'THA.LOC104815554' => 'tha', 'THA.LOC104820544' => 'tha', 'THA.LOC104824754' => 'tha', 'THA.LOC104827717' => 'tha', 'Thecc.02G031400' => 'tca', 'Thecc.02G055900' => 'tca', 'Thecc.02G350800' => 'tca', 'Thecc.06G150900' => 'tca', 'Thecc.06G186600' => 'tca', 'Thecc.07G089600' => 'tca', 'Thecc.08G020400' => 'tca', 'Thecc.08G182100' => 'tca', 'Thhalv10000873m.g' => 'esa', 'Thhalv10004185m.g' => 'esa', 'Thhalv10006981m.g' => 'esa', 'Thhalv10007204m.g' => 'esa', 'Thhalv10011374m.g' => 'esa', 'Thhalv10013482m.g' => 'esa', 'Thhalv10017801m.g' => 'esa', 'Thhalv10024983m.g' => 'esa', 'TPR.G12072' => 'tpr', 'TPR.G15769' => 'tpr', 'TPR.G16504' => 'tpr', 'TPR.G16506' => 'tpr', 'TPR.G24345' => 'tpr', 'TPR.G26666' => 'tpr', 'TPR.G27320' => 'tpr', 'TPR.G31819' => 'tpr', 'TPR.G38879' => 'tpr', 'TPR.G39015' => 'tpr', 'TPR.G8819' => 'tpr', 'TWI09G0924' => 'twi', 'TWI12G0811' => 'twi', 'TWI12G1294' => 'twi', 'TWI31G0150' => 'twi', 'TWI36G1262' => 'twi', 'TWI38G1287' => 'twi', 'TWI38G1633' => 'twi', 'TWI38G1982' => 'twi', 'TWI39G0116' => 'twi', 'TWI60G1011' => 'twi', 'TWI63G0171' => 'twi', 'TWI73G0839' => 'twi', 'TWI79G1511' => 'twi', 'unitig_0.g915' => 'ugi', 'unitig_0.g916' => 'ugi', 'unitig_21.g20219' => 'ugi', 'unitig_21.g20416' => 'ugi', 'unitig_578.g16132' => 'ugi', 'unitig_578.g16718' => 'ugi', 'unitig_62.g23481' => 'ugi', 'unitig_744.g24535' => 'ugi', 'unitig_749.g13525' => 'ugi', 'vmacro01248' => 'vma', 'vmacro02290' => 'vma', 'vmacro10946' => 'vma', 'vmacro11865' => 'vma', 'vmacro12493' => 'vma', 'vmacro17322' => 'vma', 'vmacro21599' => 'vma', 'vmacro23041' => 'vma', 'VMungo0251G0004' => 'vmu', 'VMungo0251G2639' => 'vmu', 'VMungo0251G2967' => 'vmu', 'VMungo0540G0864' => 'vmu', 'VMungo0540G1569' => 'vmu', 'VMungo0647G0317' => 'vmu', 'VMungo0720G1373' => 'vmu', 'VMungo0720G1508' => 'vmu', 'VMungo1080G0485' => 'vmu', 'VMungo1215G3177' => 'vmu', 'Zm00001eb112600' => 'zma', 'Zm00001eb120220' => 'zma', 'Zm00001eb153240' => 'zma', 'Zm00001eb168880' => 'zma', 'Zm00001eb213920' => 'zma', 'Zm00001eb228280' => 'zma', 'Zm00001eb254580' => 'zma', 'Zm00001eb272180' => 'zma', 'Zm00001eb293190' => 'zma', 'Zm00001eb322930' => 'zma', 'Zm00001eb353360' => 'zma', 'Zm00001eb353390' => 'zma', 'Zm00001eb353430' => 'zma', 'Zm00001eb353440' => 'zma', 'Zm00001eb353780' => 'zma' ) $gf_id = 'HOM05D000499' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000499' ) $data_identifier = 'HOM05D000499' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 29, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 12, 'amhyb' => (int) 8, 'aly' => (int) 12, 'aox' => (int) 9, 'arhy' => (int) 26, 'ath' => (int) 8, 'atr' => (int) 7, 'acertr' => (int) 10, 'cqu' => (int) 15, 'bca' => (int) 29, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 11, 'cansat' => (int) 8, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 9, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 8, 'cpa' => (int) 10, 'csa' => (int) 7, 'camsi' => (int) 20, 'dca' => (int) 8, 'din' => (int) 12, 'dzi' => (int) 14, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 6, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 38, 'gra' => (int) 16, 'vvi' => (int) 8, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 5, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 11, 'lja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 11, 'mpo' => (int) 3, 'mbi' => (int) 14, 'mdo' => (int) 14, 'mtr' => (int) 8, 'cme' => (int) 9, 'egut' => (int) 9, 'ama' => (int) 11, 'nta' => (int) 17, 'nnu' => (int) 11, 'oeu' => (int) 18, 'osa' => (int) 8, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 6, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 9, 'rsi' => (int) 9, 'sbr' => (int) 10, 'sbo' => (int) 8, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 10, 'sas' => (int) 10, 'shi' => (int) 6, 'smo' => (int) 7, 'sly' => (int) 14, 'spe' => (int) 10, 'spa' => (int) 8, 'tar' => (int) 19, 'tha' => (int) 10, 'tca' => (int) 8, 'esa' => (int) 8, 'tpr' => (int) 11, 'twi' => (int) 13, 'ugi' => (int) 9, 'vma' => (int) 8, 'vmu' => (int) 10, 'zma' => (int) 15 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb353780' $species_info = array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ) $local_species = 'acertr' $disabled = '' $selected = ''
include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000499', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1066', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p29780' => 'bna', 'A02p33180' => 'bna', 'A03p16470' => 'bna', 'A03p66010' => 'bna', 'A04p25970' => 'bna', 'A06p01270' => 'bna', 'A06p46080' => 'bna', 'A07p11400' => 'bna', 'A08p01840' => 'bna', 'A08p08230' => 'bna', 'A08p25740' => 'bna', 'A09p32070' => 'bna', 'A09p37830' => 'bna', 'A09p42840' => 'bna', 'A09p42850' => 'bna', 'Aa31LG10G2060' => 'aar', 'Aa31LG2G7410' => 'aar', 'Aa31LG6G10200' => 'aar', 'Aa31LG6G16680' => 'aar', 'Aa31LG6G8470' => 'aar', 'Aa31LG9G12730' => 'aar', 'Aa31LG9G13680' => 'aar', 'Aa31LG9G14920' => 'aar', 'Aa31LG9G6650' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4977' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5467' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3254' => 'aag', 'Actinidia02578' => 'ach', 'Actinidia07693' => 'ach', 'Actinidia08413' => 'ach', 'Actinidia08414' => 'ach', 'Actinidia15289' => 'ach', 'Actinidia19871' => 'ach', 'Actinidia21475' => 'ach', 'Actinidia22576' => 'ach', 'Actinidia28327' => 'ach', 'Actinidia32491' => 'ach', 'Actinidia39463' => 'ach', 'Actinidia39571' => 'ach', 'Ah.01g013750' => 'amhyb', 'Ah.01g023210' => 'amhyb', 'Ah.04g164850' => 'amhyb', 'Ah.05g178060' => 'amhyb', 'Ah.07g204270' => 'amhyb', 'Ah.07g208480' => 'amhyb', 'Ah.09g237410' => 'amhyb', 'Ah.14g089460' => 'amhyb', 'AL1G41790' => 'aly', 'AL1G49050' => 'aly', 'AL1G53810' => 'aly', 'AL1G61400' => 'aly', 'AL4G18580' => 'aly', 'AL5G12510' => 'aly', 'AL5G12540' => 'aly', 'AL6G43230' => 'aly', 'AL7G10370' => 'aly', 'AL7G19250' => 'aly', 'AL8G12240' => 'aly', 'AL8G18540' => 'aly', 'Aqoxy1G02409' => 'aox', 'Aqoxy2G03993' => 'aox', 'Aqoxy3G03357' => 'aox', 'Aqoxy4G00785' => 'aox', 'Aqoxy5G02598' => 'aox', 'Aqoxy6G00132' => 'aox', 'Aqoxy7G01776' => 'aox', 'Aqoxy7G02316' => 'aox', 'Aqoxy7G03973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.12AFKW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B8730' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27IQR1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3F75VG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3RE0GA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41TCQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.527VTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FIR39' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5W8UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DA38EV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ63HS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H1I32C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HC27T5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4M8AP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7N3CZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9UVDZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LS1NQA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT1D4B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SKC4TM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCFV76' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF9Q1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQWD9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1ZM88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WE07RT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YCK7VH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJE6Q6' => 'arhy', 'AT1G28240' => 'ath', 'AT1G34550' => 'ath', 'AT1G53040' => 'ath', 'AT2G02910' => 'ath', 'AT4G09630' => 'ath', 'AT4G38500' => 'ath', 'AT5G42660' => 'ath', 'AT5G46220' => 'ath', 'ATR0152G026' => 'atr', 'ATR0564G343' => 'atr', 'ATR0706G151' => 'atr', 'ATR0733G207' => 'atr', 'ATR0751G234' => 'atr', 'ATR0807G048' => 'atr', 'ATR1091G084' => 'atr', 'Atru.chr10.1229' => 'acertr', 'Atru.chr10.1230' => 'acertr', 'Atru.chr10.1874' => 'acertr', 'Atru.chr11.1808' => 'acertr', 'Atru.chr13.1795' => 'acertr', 'Atru.chr13.570' => 'acertr', 'Atru.chr2.2608' => 'acertr', 'Atru.chr2.2609' => 'acertr', 'Atru.chr5.3428' => 'acertr', 'Atru.chr8.1171' => 'acertr', 'AUR62004651' => 'cqu', 'AUR62008675' => 'cqu', 'AUR62010014' => 'cqu', 'AUR62013004' => 'cqu', 'AUR62014825' => 'cqu', 'AUR62015015' => 'cqu', 'AUR62015151' => 'cqu', 'AUR62017020' => 'cqu', 'AUR62019422' => 'cqu', 'AUR62023570' => 'cqu', 'AUR62025571' => 'cqu', 'AUR62029098' => 'cqu', 'AUR62033863' => 'cqu', 'AUR62034296' => 'cqu', 'AUR62040075' => 'cqu', 'BcaB02g07334' => 'bca', 'BcaB02g10575' => 'bca', 'BcaB03g12119' => 'bca', 'BcaB03g12120' => 'bca', 'BcaB03g13945' => 'bca', 'BcaB04g17123' => 'bca', 'BcaB04g17867' => 'bca', 'BcaB04g19839' => 'bca', 'BcaB07g30317' => 'bca', 'BcaB07g32432' => 'bca', 'BcaB07g33362' => 'bca', 'BcaB08g36611' => 'bca', 'BcaC01g00028' => 'bca', 'BcaC01g01356' => 'bca', 'BcaC01g02034' => 'bca', 'BcaC01g06051' => 'bca', 'BcaC03g16839' => 'bca', 'BcaC03g17176' => 'bca', 'BcaC05g26829' => 'bca', 'BcaC06g31490' => 'bca', 'BcaC06g35344' => 'bca', 'BcaC06g36570' => 'bca', 'BcaC07g37537' => 'bca', 'BcaC08g43491' => 'bca', 'BcaC08g43773' => 'bca', 'BcaNung00234' => 'bca', 'BcaNung01982' => 'bca', 'BcaNung03707' => 'bca', 'BcaNung06454' => 'bca', 'BolC2t10762H' => 'bol', 'BolC2t11191H' => 'bol', 'BolC3t14322H' => 'bol', 'BolC3t19747H' => 'bol', 'BolC3t21425H' => 'bol', 'BolC4t27800H' => 'bol', 'BolC5t31423H' => 'bol', 'BolC6t35951H' => 'bol', 'BolC6t36282H' => 'bol', 'BolC7t40678H' => 'bol', 'BolC7t40679H' => 'bol', 'BolC7t42222H' => 'bol', 'BolC7t43492H' => 'bol', 'BolC7t46785H' => 'bol', 'BolC8t47853H' => 'bol', 'BolC9t56805H' => 'bol', 'BraA02t08000Z' => 'bra', 'BraA02t08341Z' => 'bra', 'BraA03t10936Z' => 'bra', 'BraA03t15657Z' => 'bra', 'BraA04t18100Z' => 'bra', 'BraA05t20523Z' => 'bra', 'BraA06t23353Z' => 'bra', 'BraA06t27473Z' => 'bra', 'BraA06t27769Z' => 'bra', 'BraA07t28928Z' => 'bra', 'BraA08t32236Z' => 'bra', 'BraA08t32841Z' => 'bra', 'BraA08t34524Z' => 'bra', 'BraA09t38742Z' => 'bra', 'BraA09t39295Z' => 'bra', 'C02p47180' => 'bna', 'C02p50990' => 'bna', 'C03p19360' => 'bna', 'C03p74950' => 'bna', 'C03p91000' => 'bna', 'C04p63260' => 'bna', 'C05p27050' => 'bna', 'C06p08750' => 'bna', 'C06p11490' => 'bna', 'C07p02820' => 'bna', 'C07p17180' => 'bna', 'C07p29440' => 'bna', 'C07p63730' => 'bna', 'C09p39260' => 'bna', 'CAN.G1164.34' => 'can', 'CAN.G1164.39' => 'can', 'CAN.G1530.3' => 'can', 'CAN.G162.61' => 'can', 'CAN.G176.6' => 'can', 'CAN.G289.49' => 'can', 'CAN.G370.21' => 'can', 'CAN.G370.22' => 'can', 'CAN.G371.117' => 'can', 'CAN.G58.37' => 'can', 'CAN.G588.98' => 'can', 'CANSAT21G2266' => 'cansat', 'CANSAT25G2799' => 'cansat', 'CANSAT35G0862' => 'cansat', 'CANSAT35G1704' => 'cansat', 'CANSAT35G1760' => 'cansat', 'CANSAT56G3971' => 'cansat', 'CANSAT56G4116' => 'cansat', 'CANSAT80G1259' => 'cansat', 'CARHR027730' => 'chi', 'CARHR033880' => 'chi', 'CARHR043270' => 'chi', 'CARHR145330' => 'chi', 'CARHR145340' => 'chi', 'CARHR175570' => 'chi', 'CARHR181570' => 'chi', 'CARHR258470' => 'chi', 'CARHR260490' => 'chi', 'CARHR294220' => 'chi', 'Carub.0001s2668' => 'cru', 'Carub.0001s3257' => 'cru', 'Carub.0001s4220' => 'cru', 'Carub.0005s0179' => 'cru', 'Carub.0006s2807' => 'cru', 'Carub.0007s0039' => 'cru', 'Carub.0008s0169' => 'cru', 'Carub.0008s0636' => 'cru', 'Ca_00338_v3' => 'car', 'Ca_00542_v3' => 'car', 'Ca_01844_v3' => 'car', 'Ca_10611_v3' => 'car', 'Ca_13326_v3' => 'car', 'Ca_17944_v3' => 'car', 'Ca_18546_v3' => 'car', 'Ca_24219_v3' => 'car', 'Ca_29972_v3' => 'car', 'CBR_g3681' => 'cbr', 'CBR_g40021' => 'cbr', 'Cc01_g08140' => 'ccan', 'Cc02_g13410' => 'ccan', 'Cc02_g37480' => 'ccan', 'Cc05_g12030' => 'ccan', 'Cc09_g03370' => 'ccan', 'Cc09_g10300' => 'ccan', 'Cc10_g03530' => 'ccan', 'Cc10_g11380' => 'ccan', 'CDE01G0176' => 'cde', 'CDE02G0675' => 'cde', 'CDE02G0942' => 'cde', 'CDE02G1153' => 'cde', 'CDE02G4177' => 'cde', 'CDE04G2117' => 'cde', 'CDE04G2736' => 'cde', 'CDE08G1161' => 'cde', 'CDE09G1238' => 'cde', 'Cfa000467' => 'cfa', 'Cfa000947' => 'cfa', 'Cfa004969' => 'cfa', 'Cfa005284' => 'cfa', 'Cfa008993' => 'cfa', 'Cfa018187' => 'cfa', 'Cfa018454' => 'cfa', 'Cfa020585' => 'cfa', 'Ciclev10000424m.g' => 'ccl', 'Ciclev10003605m.g' => 'ccl', 'Ciclev10007828m.g' => 'ccl', 'Ciclev10014620m.g' => 'ccl', 'Ciclev10015169m.g' => 'ccl', 'Ciclev10018291m.g' => 'ccl', 'Ciclev10028256m.g' => 'ccl', 'Ciclev10033822m.g' => 'ccl', 'CiPaw.05G060300' => 'cil', 'CiPaw.05G085000' => 'cil', 'CiPaw.06G083700' => 'cil', 'CiPaw.06G120300' => 'cil', 'CiPaw.09G060500' => 'cil', 'CiPaw.09G123800' => 'cil', 'CiPaw.11G169700' => 'cil', 'CiPaw.12G118300' => 'cil', 'CiPaw.15G071000' => 'cil', 'CiPaw.15G081900' => 'cil', 'ClCG01G024610' => 'cla', 'ClCG03G006070' => 'cla', 'ClCG05G019250' => 'cla', 'ClCG09G009500' => 'cla', 'ClCG11G008200' => 'cla', 'ClCG11G018080' => 'cla', 'COL.COLO4_17373' => 'col', 'COL.COLO4_22994' => 'col', 'COL.COLO4_26389' => 'col', 'COL.COLO4_27170' => 'col', 'COL.COLO4_31074' => 'col', 'COL.COLO4_31465' => 'col', 'COL.COLO4_36438' => 'col', 'COL.COLO4_36439' => 'col', 'Cpa.g.c38781' => 'cpa', 'Cpa.g.sc128.12' => 'cpa', 'Cpa.g.sc166.7' => 'cpa', 'Cpa.g.sc166.8' => 'cpa', 'Cpa.g.sc20.111' => 'cpa', 'Cpa.g.sc27.31' => 'cpa', 'Cpa.g.sc64.36' => 'cpa', 'Cpa.g.sc64.37' => 'cpa', 'Cpa.g.sc66.49' => 'cpa', 'Cpa.g.sc80.64' => 'cpa', 'CsaV3_1G012320' => 'csa', 'CsaV3_2G008480' => 'csa', 'CsaV3_2G033450' => 'csa', 'CsaV3_3G044830' => 'csa', 'CsaV3_4G033710' => 'csa', 'CsaV3_6G051730' => 'csa', 'CsaV3_7G025350' => 'csa', 'CSS0001067' => 'camsi', 'CSS0005996' => 'camsi', 'CSS0006590' => 'camsi', 'CSS0009673' => 'camsi', 'CSS0010201' => 'camsi', 'CSS0010549' => 'camsi', 'CSS0011364' => 'camsi', 'CSS0014473' => 'camsi', 'CSS0014961' => 'camsi', 'CSS0020191' => 'camsi', 'CSS0021165' => 'camsi', 'CSS0022306' => 'camsi', 'CSS0030591' => 'camsi', 'CSS0030696' => 'camsi', 'CSS0032653' => 'camsi', 'CSS0037487' => 'camsi', 'CSS0041102' => 'camsi', 'CSS0041261' => 'camsi', 'CSS0046246' => 'camsi', 'CSS0049256' => 'camsi', 'DCAR_004075' => 'dca', 'DCAR_011538' => 'dca', 'DCAR_019553' => 'dca', 'DCAR_020952' => 'dca', 'DCAR_021739' => 'dca', 'DCAR_027407' => 'dca', 'DCAR_027913' => 'dca', 'DCAR_028066' => 'dca', 'Dinv05899' => 'din', 'Dinv07563' => 'din', 'Dinv08010' => 'din', 'Dinv14125' => 'din', 'Dinv20172' => 'din', 'Dinv30743' => 'din', 'Dinv31229' => 'din', 'Dinv34162' => 'din', 'Dinv36028' => 'din', 'Dinv39368' => 'din', 'Dinv40565' => 'din', 'Dinv41706' => 'din', 'Duzib052G0089' => 'dzi', 'Duzib116G0641' => 'dzi', 'Duzib132G0069' => 'dzi', 'Duzib132G1219' => 'dzi', 'Duzib147G0278' => 'dzi', 'Duzib160G0480' => 'dzi', 'Duzib170G0661' => 'dzi', 'Duzib177G0591' => 'dzi', 'Duzib187G1353' => 'dzi', 'Duzib192G0858' => 'dzi', 'Duzib192G0883' => 'dzi', 'Duzib213G0506' => 'dzi', 'Duzib235G0289' => 'dzi', 'Duzib251G0422' => 'dzi', 'ECA232G3898' => 'eca', 'ECA233G5950' => 'eca', 'ECA234G1699' => 'eca', 'ECA234G2421' => 'eca', 'ECA236G0426' => 'eca', 'ECA236G4331' => 'eca', 'ECA248G2573' => 'eca', 'EL10Ac1g00077' => 'bvu', 'EL10Ac1g01746' => 'bvu', 'EL10Ac2g03464' => 'bvu', 'EL10Ac4g08176' => 'bvu', 'EL10Ac7g17521' => 'bvu', 'EL10Ac8g20386' => 'bvu', 'EL10Ac9g21343' => 'bvu', 'EL10Ac9g22688' => 'bvu', 'Eucgr.B03434' => 'egr', 'Eucgr.D00618' => 'egr', 'Eucgr.E02395' => 'egr', 'Eucgr.F01129' => 'egr', 'Eucgr.F02622' => 'egr', 'Eucgr.F04207' => 'egr', 'FAN01G0570' => 'fan', 'FAN03G3351' => 'fan', 'FAN06G3702' => 'fan', 'FAN07G2149' => 'fan', 'FAN10G3758' => 'fan', 'FAN11G1170' => 'fan', 'FAN11G2050' => 'fan', 'FAN11G2724' => 'fan', 'FAN12G1700' => 'fan', 'FAN12G2028' => 'fan', 'FAN15G1160' => 'fan', 'FAN15G3063' => 'fan', 'FAN16G2540' => 'fan', 'FAN16G3077' => 'fan', 'FAN16G3624' => 'fan', 'FAN17G0221' => 'fan', 'FAN20G2492' => 'fan', 'FAN20G2905' => 'fan', 'FAN21G0548' => 'fan', 'FAN21G1300' => 'fan', 'FAN22G0077' => 'fan', 'FAN22G1315' => 'fan', 'FAN24G1280' => 'fan', 'FAN24G1445' => 'fan', 'FAN24G3527' => 'fan', 'FAN25G0464' => 'fan', 'FAN25G2885' => 'fan', 'FAN25G3270' => 'fan', 'FAN27G1101' => 'fan', 'FAN27G2846' => 'fan', 'FAN27G3524' => 'fan', 'FvH4_2g11770' => 'fve', 'FvH4_2g15630' => 'fve', 'FvH4_3g05570' => 'fve', 'FvH4_3g09110' => 'fve', 'FvH4_3g19940' => 'fve', 'FvH4_4g04821' => 'fve', 'FvH4_4g31480' => 'fve', 'FvH4_7g01740' => 'fve', 'Glyma.05G130400' => 'gma', 'Glyma.05G156400' => 'gma', 'Glyma.07G197000' => 'gma', 'Glyma.08G085151' => 'gma', 'Glyma.08G114500' => 'gma', 'Glyma.08G300400' => 'gma', 'Glyma.10G215800' => 'gma', 'Glyma.12G224400' => 'gma', 'Glyma.13G179300' => 'gma', 'Glyma.13G218151' => 'gma', 'Glyma.13G238800' => 'gma', 'Glyma.13G276900' => 'gma', 'Glyma.14G078200' => 'gma', 'Glyma.15G074500' => 'gma', 'Glyma.15G094100' => 'gma', 'Glyma.17G247200' => 'gma', 'Glyma.18G120100' => 'gma', 'Glyma.20G176000' => 'gma', 'Gohir.A01G063600' => 'ghi', 'Gohir.A01G170301' => 'ghi', 'Gohir.A02G060500' => 'ghi', 'Gohir.A05G133850' => 'ghi', 'Gohir.A05G161400' => 'ghi', 'Gohir.A06G012900' => 'ghi', 'Gohir.A06G035901' => 'ghi', 'Gohir.A06G127100' => 'ghi', 'Gohir.A06G210500' => 'ghi', 'Gohir.A08G008650' => 'ghi', 'Gohir.A09G072700' => 'ghi', 'Gohir.A09G088301' => 'ghi', 'Gohir.A10G040600' => 'ghi', 'Gohir.A12G036300' => 'ghi', 'Gohir.A12G143350' => 'ghi', 'Gohir.A12G165500' => 'ghi', 'Gohir.A13G145700' => 'ghi', 'Gohir.D01G050000' => 'ghi', 'Gohir.D01G051366' => 'ghi', 'Gohir.D01G161350' => 'ghi', 'Gohir.D02G065900' => 'ghi', 'Gohir.D05G164200' => 'ghi', 'Gohir.D05G355500' => 'ghi', 'Gohir.D06G010400' => 'ghi', 'Gohir.D06G111250' => 'ghi', 'Gohir.D06G132000' => 'ghi', 'Gohir.D06G210500' => 'ghi', 'Gohir.D07G165675' => 'ghi', 'Gohir.D08G062240' => 'ghi', 'Gohir.D08G086101' => 'ghi', 'Gohir.D08G138060' => 'ghi', 'Gohir.D09G072300' => 'ghi', 'Gohir.D10G041400' => 'ghi', 'Gohir.D11G191020' => 'ghi', 'Gohir.D11G212066' => 'ghi', 'Gohir.D12G036300' => 'ghi', 'Gohir.D12G168600' => 'ghi', 'Gohir.D13G150600' => 'ghi', 'Gorai.001G057300' => 'gra', 'Gorai.002G069900' => 'gra', 'Gorai.002G200000' => 'gra', 'Gorai.003G067600' => 'gra', 'Gorai.005G074800' => 'gra', 'Gorai.006G087300' => 'gra', 'Gorai.008G037500' => 'gra', 'Gorai.008G181400' => 'gra', 'Gorai.009G169400' => 'gra', 'Gorai.009G387900' => 'gra', 'Gorai.010G013300' => 'gra', 'Gorai.010G153800' => 'gra', 'Gorai.010G255800' => 'gra', 'Gorai.011G043700' => 'gra', 'Gorai.011G198900' => 'gra', 'Gorai.013G168400' => 'gra', 'GSVIVG01005212001' => 'vvi', 'GSVIVG01006163001' => 'vvi', 'GSVIVG01009625001' => 'vvi', 'GSVIVG01014338001' => 'vvi', 'GSVIVG01020005001' => 'vvi', 'GSVIVG01021450001' => 'vvi', 'GSVIVG01023975001' => 'vvi', 'GSVIVG01034490001' => 'vvi', 'HanXRQChr04g0112071' => 'han', 'HanXRQChr05g0131151' => 'han', 'HanXRQChr09g0262371' => 'han', 'HanXRQChr09g0268401' => 'han', 'HanXRQChr10g0279241' => 'han', 'HanXRQChr10g0297961' => 'han', 'HanXRQChr11g0326231' => 'han', 'HanXRQChr11g0328471' => 'han', 'HanXRQChr16g0507941' => 'han', 'HanXRQChr17g0560211' => 'han', 'Haze_02108' => 'cav', 'Haze_02428' => 'cav', 'Haze_05593' => 'cav', 'Haze_06448' => 'cav', 'Haze_09427' => 'cav', 'Haze_12022' => 'cav', 'Haze_17612' => 'cav', 'Haze_17928' => 'cav', 'Hma1.2p1_0032F.1_g019250' => 'hma', 'Hma1.2p1_0163F.1_g072690' => 'hma', 'Hma1.2p1_0265F.1_g106710' => 'hma', 'Hma1.2p1_0286F.1_g113970' => 'hma', 'Hma1.2p1_0363F.1_g136640' => 'hma', 'Hma1.2p1_0584F.1_g183470' => 'hma', 'Hma1.2p1_0885F.1_g232570' => 'hma', 'HPP92_006022' => 'vpl', 'HPP92_007320' => 'vpl', 'HPP92_011521' => 'vpl', 'HPP92_019387' => 'vpl', 'HPP92_024038' => 'vpl', 'Hund05891' => 'sun', 'Hund06450' => 'sun', 'Hund12053' => 'sun', 'Hund16800' => 'sun', 'Hund21222' => 'sun', 'Hund22896' => 'sun', 'Hund23746' => 'sun', 'Hund27083' => 'sun', 'Lalb_Chr02g0141831' => 'lal', 'Lalb_Chr02g0141841' => 'lal', 'Lalb_Chr05g0220411' => 'lal', 'Lalb_Chr06g0162081' => 'lal', 'Lalb_Chr09g0327651' => 'lal', 'Lalb_Chr13g0295051' => 'lal', 'Lalb_Chr15g0086801' => 'lal', 'Lalb_Chr16g0383781' => 'lal', 'Lalb_Chr16g0383791' => 'lal', 'Lalb_Chr18g0055441' => 'lal', 'Lalb_Chr18g0059611' => 'lal', 'Lalb_Chr20g0109661' => 'lal', 'Lalb_Chr20g0109831' => 'lal', 'Lalb_Chr20g0121871' => 'lal', 'Lalb_Chr22g0355361' => 'lal', 'Lalb_Chr25g0286371' => 'lal', 'Lj1A1187G43' => 'lonja', 'Lj1A1205T50' => 'lonja', 'Lj1A800G33' => 'lonja', 'Lj1C1187T7' => 'lonja', 'Lj1C843T11' => 'lonja', 'Lj1g0010940' => 'lja', 'Lj2A288T69' => 'lonja', 'Lj3g0024276' => 'lja', 'Lj4A47T76' => 'lonja', 'Lj4g0005805' => 'lja', 'Lj4g0006097' => 'lja', 'Lj4g0008528' => 'lja', 'Lj4g0024907' => 'lja', 'Lj5g0012472' => 'lja', 'Lj5g0018648' => 'lja', 'Lj6C789G1' => 'lonja', 'Lj6g0004000' => 'lja', 'Lj7A292G67' => 'lonja', 'Lj7A292T64' => 'lonja', 'Lj9A400T58' => 'lonja', 'Lsat_1_v5_gn_1_126181' => 'lsa', 'Lsat_1_v5_gn_4_123041' => 'lsa', 'Lsat_1_v5_gn_4_133620' => 'lsa', 'Lsat_1_v5_gn_4_53221' => 'lsa', 'Lsat_1_v5_gn_4_71961' => 'lsa', 'Lsat_1_v5_gn_7_105241' => 'lsa', 'Lsat_1_v5_gn_7_21361' => 'lsa', 'Lsat_1_v5_gn_7_28860' => 'lsa', 'Lsat_1_v5_gn_7_31260' => 'lsa', 'Lsat_1_v5_gn_8_52801' => 'lsa', 'Manes.02G191400' => 'mes', 'Manes.03G110100' => 'mes', 'Manes.04G071100' => 'mes', 'Manes.05G100500' => 'mes', 'Manes.05G164700' => 'mes', 'Manes.15G087000' => 'mes', 'Manes.15G121500' => 'mes', 'Manes.16G028300' => 'mes', 'Manes.17G046100' => 'mes', 'Manes.17G069800' => 'mes', 'Manes.18G100500' => 'mes', 'Mapoly0002s0109' => 'mpo', 'Mapoly0024s0007' => 'mpo', 'Mapoly0089s0032' => 'mpo', 'MBI04_g42241_MAGBIO' => 'mbi', 'MBI05_g11988_MAGBIO' => 'mbi', 'MBI05_g35452_MAGBIO' => 'mbi', 'MBI07_g30179_MAGBIO' => 'mbi', 'MBI07_g35859_MAGBIO' => 'mbi', 'MBI07_g35860_MAGBIO' => 'mbi', 'MBI07_g37166_MAGBIO' => 'mbi', 'MBI08_g18172_MAGBIO' => 'mbi', 'MBI09_g08441_MAGBIO' => 'mbi', 'MBI13_g01676_MAGBIO' => 'mbi', 'MBI14_g42955_MAGBIO' => 'mbi', 'MBI16_g13161_MAGBIO' => 'mbi', 'MBI17_g27204_MAGBIO' => 'mbi', 'MBI19_g21595_MAGBIO' => 'mbi', 'MD00G1148400' => 'mdo', 'MD02G1301200' => 'mdo', 'MD03G1227800' => 'mdo', 'MD05G1041100' => 'mdo', 'MD05G1124800' => 'mdo', 'MD05G1284000' => 'mdo', 'MD05G1338800' => 'mdo', 'MD05G1338900' => 'mdo', 'MD07G1022800' => 'mdo', 'MD10G1047500' => 'mdo', 'MD10G1127500' => 'mdo', 'MD10G1262300' => 'mdo', 'MD10G1293800' => 'mdo', 'MD16G1074300' => 'mdo', 'Medtr1g021670' => 'mtr', 'Medtr1g096320' => 'mtr', 'Medtr2g013690' => 'mtr', 'Medtr2g019450' => 'mtr', 'Medtr2g085170' => 'mtr', 'Medtr4g088785' => 'mtr', 'Medtr8g055930' => 'mtr', 'Medtr8g085850' => 'mtr', 'MELO3C002605.2' => 'cme', 'MELO3C003891.2' => 'cme', 'MELO3C004012.2' => 'cme', 'MELO3C007134.2' => 'cme', 'MELO3C008118.2' => 'cme', 'MELO3C016700.2' => 'cme', 'MELO3C024127.2' => 'cme', 'MELO3C033361.2' => 'cme', 'MELO3C033362.2' => 'cme', 'Migut.C00430' => 'egut', 'Migut.C01246' => 'egut', 'Migut.E00101' => 'egut', 'Migut.H01486' => 'egut', 'Migut.H01939' => 'egut', 'Migut.K00360' => 'egut', 'Migut.M00910' => 'egut', 'Migut.M01139' => 'egut', 'Migut.N02677' => 'egut', 'MSTRG.13252' => 'ama', 'MSTRG.14701' => 'ama', 'MSTRG.1521' => 'ama', 'MSTRG.15884' => 'ama', 'MSTRG.16242' => 'ama', 'MSTRG.22285' => 'ama', 'MSTRG.22444' => 'ama', 'MSTRG.2349' => 'ama', 'MSTRG.26308' => 'ama', 'MSTRG.28296' => 'ama', 'MSTRG.9895' => 'ama', 'Nitab4.5_0000110g0060' => 'nta', 'Nitab4.5_0000420g0130' => 'nta', 'Nitab4.5_0000422g0030' => 'nta', 'Nitab4.5_0000560g0180' => 'nta', 'Nitab4.5_0000703g0100' => 'nta', 'Nitab4.5_0000786g0200' => 'nta', 'Nitab4.5_0001336g0020' => 'nta', 'Nitab4.5_0001796g0030' => 'nta', 'Nitab4.5_0003348g0060' => 'nta', 'Nitab4.5_0003698g0040' => 'nta', 'Nitab4.5_0003942g0090' => 'nta', 'Nitab4.5_0004775g0070' => 'nta', 'Nitab4.5_0004864g0030' => 'nta', 'Nitab4.5_0005615g0020' => 'nta', 'Nitab4.5_0009288g0030' => 'nta', 'Nitab4.5_0009341g0010' => 'nta', 'Nitab4.5_0009535g0010' => 'nta', 'Nn1g03995' => 'nnu', 'Nn1g04100' => 'nnu', 'Nn1g06530' => 'nnu', 'Nn3g16404' => 'nnu', 'Nn3g17212' => 'nnu', 'Nn3g20776' => 'nnu', 'Nn3g21923' => 'nnu', 'Nn5g27737' => 'nnu', 'Nn5g29461' => 'nnu', 'Nn7g38355' => 'nnu', 'Nn8g39873' => 'nnu', 'Oeu000548.2' => 'oeu', 'Oeu004672.1' => 'oeu', 'Oeu015605.2' => 'oeu', 'Oeu016092.1' => 'oeu', 'Oeu017879.3' => 'oeu', 'Oeu024910.1' => 'oeu', 'Oeu028965.1' => 'oeu', 'Oeu031269.1' => 'oeu', 'Oeu031270.1' => 'oeu', 'Oeu032535.1' => 'oeu', 'Oeu034151.1' => 'oeu', 'Oeu034152.1' => 'oeu', 'Oeu034588.2' => 'oeu', 'Oeu050846.1' => 'oeu', 'Oeu050849.2' => 'oeu', 'Oeu051063.2' => 'oeu', 'Oeu052368.1' => 'oeu', 'Oeu052370.1' => 'oeu', 'Os01g0210400' => 'osa', 'Os01g0304300' => 'osa', 'Os01g0749100' => 'osa', 'Os02g0745800' => 'osa', 'Os03g0769050' => 'osa', 'Os05g0531500' => 'osa', 'Os06g0724300' => 'osa', 'Os11g0198100' => 'osa', 'Peaxi162Scf00069g01425' => 'pax', 'Peaxi162Scf00280g00811' => 'pax', 'Peaxi162Scf00310g00615' => 'pax', 'Peaxi162Scf00362g00542' => 'pax', 'Peaxi162Scf00461g00310' => 'pax', 'Peaxi162Scf00530g00118' => 'pax', 'Peaxi162Scf00541g00057' => 'pax', 'Peaxi162Scf00661g00017' => 'pax', 'Peaxi162Scf00926g00027' => 'pax', 'Peaxi162Scf01064g00263' => 'pax', 'Peaxi162Scf01211g00135' => 'pax', 'PGR004G2336' => 'pgr', 'PGR042G0327' => 'pgr', 'PGR042G1957' => 'pgr', 'PGR042G2003' => 'pgr', 'PGR042G3929' => 'pgr', 'PGR083G1137' => 'pgr', 'PGR083G1364' => 'pgr', 'PGSC0003DMG400003381' => 'stu', 'PGSC0003DMG400003417' => 'stu', 'PGSC0003DMG400008981' => 'stu', 'PGSC0003DMG400012417' => 'stu', 'PGSC0003DMG400012823' => 'stu', 'PGSC0003DMG400016885' => 'stu', 'PGSC0003DMG400022812' => 'stu', 'PGSC0003DMG400029726' => 'stu', 'PGSC0003DMG401009243' => 'stu', 'PGSC0003DMG401031505' => 'stu', 'PGSC0003DMG402031505' => 'stu', 'Phvul.001G017600' => 'pvu', 'Phvul.002G193500' => 'pvu', 'Phvul.002G228900' => 'pvu', 'Phvul.002G236800' => 'pvu', 'Phvul.003G049500' => 'pvu', 'Phvul.005G072000' => 'pvu', 'Phvul.006G164800' => 'pvu', 'Phvul.006G185100' => 'pvu', 'Phvul.007G090000' => 'pvu', 'Potri.001G399800' => 'ptr', 'Potri.002G149900' => 'ptr', 'Potri.004G044100' => 'ptr', 'Potri.004G177600' => 'ptr', 'Potri.009G138000' => 'ptr', 'Potri.010G094000' => 'ptr', 'Potri.011G053000' => 'ptr', 'Potri.011G119300' => 'ptr', 'Potri.013G113700' => 'ptr', 'Potri.018G107800' => 'ptr', 'Potri.019G084100' => 'ptr', 'Pp3c14_23720' => 'ppa', 'Pp3c16_6340' => 'ppa', 'Pp3c23_13420' => 'ppa', 'Pp3c24_2740' => 'ppa', 'Pp3c25_860' => 'ppa', 'Pp3c8_21750' => 'ppa', 'Prupe.1G273000' => 'ppe', 'Prupe.1G273700' => 'ppe', 'Prupe.1G274100' => 'ppe', 'Prupe.2G023300' => 'ppe', 'Prupe.4G048000' => 'ppe', 'Prupe.4G080400' => 'ppe', 'Prupe.4G181200' => 'ppe', 'Prupe.8G056900' => 'ppe', 'Prupe.8G168700' => 'ppe', 'Psat1g189080' => 'psa', 'Psat1g204760' => 'psa', 'Psat4g175560' => 'psa', 'Psat4g177720' => 'psa', 'Psat5g244240' => 'psa', 'Psat6g010720' => 'psa', 'Psat6g187200' => 'psa', 'Psat7g072040' => 'psa', 'PSO017G3501' => 'pso', 'PSO063G2148' => 'pso', 'PSO063G5608' => 'pso', 'PSO210G6392' => 'pso', 'PSO541G2319' => 'pso', 'PSO541G2836' => 'pso', 'PSO541G4012' => 'pso', 'PSO541G6253' => 'pso', 'PSO675G0580' => 'pso', 'PSO675G0856' => 'pso', 'PSO675G5635' => 'pso', 'PSO675G9157' => 'pso', 'PSO832G1660' => 'pso', 'PSO832G1969' => 'pso', 'QL02p007186' => 'qlo', 'QL02p033904' => 'qlo', 'QL03p064391' => 'qlo', 'QL05p040593' => 'qlo', 'QL05p058242' => 'qlo', 'QL08p021825' => 'qlo', 'QL11p004981' => 'qlo', 'RcHm_v2.0_Chr1g0318301' => 'rch', 'RcHm_v2.0_Chr4g0418501' => 'rch', 'RcHm_v2.0_Chr4g0439971' => 'rch', 'RcHm_v2.0_Chr5g0008541' => 'rch', 'RcHm_v2.0_Chr5g0014101' => 'rch', 'RcHm_v2.0_Chr5g0014131' => 'rch', 'RcHm_v2.0_Chr5g0033621' => 'rch', 'RcHm_v2.0_Chr6g0272041' => 'rch', 'RcHm_v2.0_Chr6g0278831' => 'rch', 'Rhsim02G0130400' => 'rsi', 'Rhsim02G0171100' => 'rsi', 'Rhsim05G0053000' => 'rsi', 'Rhsim05G0053100' => 'rsi', 'Rhsim06G0096500' => 'rsi', 'Rhsim06G0096600' => 'rsi', 'Rhsim06G0199100' => 'rsi', 'Rhsim12G0062300' => 'rsi', 'Rhsim12G0062800' => 'rsi', 'Sabra02G0118600' => 'sbr', 'Sabra04G0027300' => 'sbr', 'Sabra04G0119500' => 'sbr', 'Sabra08G0112500' => 'sbr', 'Sabra11G0036800' => 'sbr', 'Sabra11G0103800' => 'sbr', 'Sabra13G0096300' => 'sbr', 'Sabra16G0262300' => 'sbr', 'Sabra18G0091700' => 'sbr', 'Sabra19G0095400' => 'sbr', 'SalBow6G3080' => 'sbo', 'SalBow7G1157' => 'sbo', 'SalBow7G2123' => 'sbo', 'SalBow7G2285' => 'sbo', 'SalBow7G3537' => 'sbo', 'SalBow8G2947' => 'sbo', 'SalBow8G4463' => 'sbo', 'SalBow8G5466' => 'sbo', 'Sc01g0001750' => 'sci', 'Sc02g0006640' => 'sci', 'Sc02g0006670' => 'sci', 'Sc04g0008220' => 'sci', 'Sc05g0006190' => 'sci', 'Sc08g0002760' => 'sci', 'Sc17g0006170' => 'sci', 'Sc22g0002050' => 'sci', 'Sc23g0001190' => 'sci', 'Sc24g0000980' => 'sci', 'Sed0006245' => 'sed', 'Sed0007543' => 'sed', 'Sed0009411' => 'sed', 'Sed0010765' => 'sed', 'Sed0012944' => 'sed', 'Sed0014682' => 'sed', 'Sed0016174' => 'sed', 'Sed0016796' => 'sed', 'Sed0020317' => 'sed', 'Sed0021467' => 'sed', 'SEGI_01316' => 'sgi', 'SEGI_03374' => 'sgi', 'SEGI_16265' => 'sgi', 'SEGI_18569' => 'sgi', 'SEGI_20351' => 'sgi', 'SEGI_26395' => 'sgi', 'SEGI_29469' => 'sgi', 'SEGI_34771' => 'sgi', 'SEGI_36769' => 'sgi', 'SEGI_37139' => 'sgi', 'SGA_v2.0_scaffold100G29687' => 'sas', 'SGA_v2.0_scaffold118G32472' => 'sas', 'SGA_v2.0_scaffold14G07051' => 'sas', 'SGA_v2.0_scaffold183G39845' => 'sas', 'SGA_v2.0_scaffold1G00174' => 'sas', 'SGA_v2.0_scaffold22G09714' => 'sas', 'SGA_v2.0_scaffold333G48992' => 'sas', 'SGA_v2.0_scaffold46G17491' => 'sas', 'SGA_v2.0_scaffold49G18294' => 'sas', 'SGA_v2.0_scaffold63G21658' => 'sas', 'SHI01741' => 'shi', 'SHI05771' => 'shi', 'SHI18077' => 'shi', 'SHI20525' => 'shi', 'SHI20527' => 'shi', 'SHI20528' => 'shi', 'SMO172G0185' => 'smo', 'SMO198G0020' => 'smo', 'SMO351G0006' => 'smo', 'SMO356G0118' => 'smo', 'SMO358G0296' => 'smo', 'SMO367G0079' => 'smo', 'SMO367G1277' => 'smo', 'Solyc01g014220.3' => 'sly', 'Solyc01g111770.2' => 'sly', 'Solyc02g078180.3' => 'sly', 'Solyc03g006430.3' => 'sly', 'Solyc03g006456.1' => 'sly', 'Solyc03g079860.2' => 'sly', 'Solyc04g079770.3' => 'sly', 'Solyc05g007430.4' => 'sly', 'Solyc07g063150.3' => 'sly', 'Solyc08g016620.3' => 'sly', 'Solyc09g057590.3' => 'sly', 'Solyc09g057600.1' => 'sly', 'Solyc10g009050.3' => 'sly', 'Solyc11g017420.2' => 'sly', 'Sopen01g053810' => 'spe', 'Sopen02g023040' => 'spe', 'Sopen03g002440' => 'spe', 'Sopen04g033350' => 'spe', 'Sopen05g003310' => 'spe', 'Sopen07g004050' => 'spe', 'Sopen07g031340' => 'spe', 'Sopen08g006990' => 'spe', 'Sopen10g004830' => 'spe', 'Sopen11g009370' => 'spe', 'Sp1g24450' => 'spa', 'Sp1g29670' => 'spa', 'Sp1g39600' => 'spa', 'Sp2g11080' => 'spa', 'Sp2g13970' => 'spa', 'Sp4g16130' => 'spa', 'Sp6g13080' => 'spa', 'Sp7g37270' => 'spa', 'TAR371G0065' => 'tar', 'TAR376G0340' => 'tar', 'TAR376G0435' => 'tar', 'TAR381G0002' => 'tar', 'TAR381G1236' => 'tar', 'TAR624G0055' => 'tar', 'TAR624G0324' => 'tar', 'TAR624G0696' => 'tar', 'TAR624G0906' => 'tar', 'TAR625G0107' => 'tar', 'TAR626G0015' => 'tar', 'TAR626G1356' => 'tar', 'TAR627G0888' => 'tar', 'TAR628G0399' => 'tar', 'TAR628G1327' => 'tar', 'TAR629G2831' => 'tar', 'TAR629G2874' => 'tar', 'TAR633G1432' => 'tar', 'TAR633G2771' => 'tar', 'THA.LOC104803394' => 'tha', 'THA.LOC104805153' => 'tha', 'THA.LOC104806784' => 'tha', 'THA.LOC104810473' => 'tha', 'THA.LOC104813100' => 'tha', 'THA.LOC104814215' => 'tha', 'THA.LOC104815554' => 'tha', 'THA.LOC104820544' => 'tha', 'THA.LOC104824754' => 'tha', 'THA.LOC104827717' => 'tha', 'Thecc.02G031400' => 'tca', 'Thecc.02G055900' => 'tca', 'Thecc.02G350800' => 'tca', 'Thecc.06G150900' => 'tca', 'Thecc.06G186600' => 'tca', 'Thecc.07G089600' => 'tca', 'Thecc.08G020400' => 'tca', 'Thecc.08G182100' => 'tca', 'Thhalv10000873m.g' => 'esa', 'Thhalv10004185m.g' => 'esa', 'Thhalv10006981m.g' => 'esa', 'Thhalv10007204m.g' => 'esa', 'Thhalv10011374m.g' => 'esa', 'Thhalv10013482m.g' => 'esa', 'Thhalv10017801m.g' => 'esa', 'Thhalv10024983m.g' => 'esa', 'TPR.G12072' => 'tpr', 'TPR.G15769' => 'tpr', 'TPR.G16504' => 'tpr', 'TPR.G16506' => 'tpr', 'TPR.G24345' => 'tpr', 'TPR.G26666' => 'tpr', 'TPR.G27320' => 'tpr', 'TPR.G31819' => 'tpr', 'TPR.G38879' => 'tpr', 'TPR.G39015' => 'tpr', 'TPR.G8819' => 'tpr', 'TWI09G0924' => 'twi', 'TWI12G0811' => 'twi', 'TWI12G1294' => 'twi', 'TWI31G0150' => 'twi', 'TWI36G1262' => 'twi', 'TWI38G1287' => 'twi', 'TWI38G1633' => 'twi', 'TWI38G1982' => 'twi', 'TWI39G0116' => 'twi', 'TWI60G1011' => 'twi', 'TWI63G0171' => 'twi', 'TWI73G0839' => 'twi', 'TWI79G1511' => 'twi', 'unitig_0.g915' => 'ugi', 'unitig_0.g916' => 'ugi', 'unitig_21.g20219' => 'ugi', 'unitig_21.g20416' => 'ugi', 'unitig_578.g16132' => 'ugi', 'unitig_578.g16718' => 'ugi', 'unitig_62.g23481' => 'ugi', 'unitig_744.g24535' => 'ugi', 'unitig_749.g13525' => 'ugi', 'vmacro01248' => 'vma', 'vmacro02290' => 'vma', 'vmacro10946' => 'vma', 'vmacro11865' => 'vma', 'vmacro12493' => 'vma', 'vmacro17322' => 'vma', 'vmacro21599' => 'vma', 'vmacro23041' => 'vma', 'VMungo0251G0004' => 'vmu', 'VMungo0251G2639' => 'vmu', 'VMungo0251G2967' => 'vmu', 'VMungo0540G0864' => 'vmu', 'VMungo0540G1569' => 'vmu', 'VMungo0647G0317' => 'vmu', 'VMungo0720G1373' => 'vmu', 'VMungo0720G1508' => 'vmu', 'VMungo1080G0485' => 'vmu', 'VMungo1215G3177' => 'vmu', 'Zm00001eb112600' => 'zma', 'Zm00001eb120220' => 'zma', 'Zm00001eb153240' => 'zma', 'Zm00001eb168880' => 'zma', 'Zm00001eb213920' => 'zma', 'Zm00001eb228280' => 'zma', 'Zm00001eb254580' => 'zma', 'Zm00001eb272180' => 'zma', 'Zm00001eb293190' => 'zma', 'Zm00001eb322930' => 'zma', 'Zm00001eb353360' => 'zma', 'Zm00001eb353390' => 'zma', 'Zm00001eb353430' => 'zma', 'Zm00001eb353440' => 'zma', 'Zm00001eb353780' => 'zma' ), 'gf_id' => 'HOM05D000499', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000499' ), 'data_identifier' => 'HOM05D000499', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000499', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1066', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p29780' => 'bna', 'A02p33180' => 'bna', 'A03p16470' => 'bna', 'A03p66010' => 'bna', 'A04p25970' => 'bna', 'A06p01270' => 'bna', 'A06p46080' => 'bna', 'A07p11400' => 'bna', 'A08p01840' => 'bna', 'A08p08230' => 'bna', 'A08p25740' => 'bna', 'A09p32070' => 'bna', 'A09p37830' => 'bna', 'A09p42840' => 'bna', 'A09p42850' => 'bna', 'Aa31LG10G2060' => 'aar', 'Aa31LG2G7410' => 'aar', 'Aa31LG6G10200' => 'aar', 'Aa31LG6G16680' => 'aar', 'Aa31LG6G8470' => 'aar', 'Aa31LG9G12730' => 'aar', 'Aa31LG9G13680' => 'aar', 'Aa31LG9G14920' => 'aar', 'Aa31LG9G6650' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4977' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5467' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3254' => 'aag', 'Actinidia02578' => 'ach', 'Actinidia07693' => 'ach', 'Actinidia08413' => 'ach', 'Actinidia08414' => 'ach', 'Actinidia15289' => 'ach', 'Actinidia19871' => 'ach', 'Actinidia21475' => 'ach', 'Actinidia22576' => 'ach', 'Actinidia28327' => 'ach', 'Actinidia32491' => 'ach', 'Actinidia39463' => 'ach', 'Actinidia39571' => 'ach', 'Ah.01g013750' => 'amhyb', 'Ah.01g023210' => 'amhyb', 'Ah.04g164850' => 'amhyb', 'Ah.05g178060' => 'amhyb', 'Ah.07g204270' => 'amhyb', 'Ah.07g208480' => 'amhyb', 'Ah.09g237410' => 'amhyb', 'Ah.14g089460' => 'amhyb', 'AL1G41790' => 'aly', 'AL1G49050' => 'aly', 'AL1G53810' => 'aly', 'AL1G61400' => 'aly', 'AL4G18580' => 'aly', 'AL5G12510' => 'aly', 'AL5G12540' => 'aly', 'AL6G43230' => 'aly', 'AL7G10370' => 'aly', 'AL7G19250' => 'aly', 'AL8G12240' => 'aly', 'AL8G18540' => 'aly', 'Aqoxy1G02409' => 'aox', 'Aqoxy2G03993' => 'aox', 'Aqoxy3G03357' => 'aox', 'Aqoxy4G00785' => 'aox', 'Aqoxy5G02598' => 'aox', 'Aqoxy6G00132' => 'aox', 'Aqoxy7G01776' => 'aox', 'Aqoxy7G02316' => 'aox', 'Aqoxy7G03973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.12AFKW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B8730' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27IQR1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3F75VG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3RE0GA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41TCQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.527VTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FIR39' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5W8UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DA38EV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ63HS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H1I32C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HC27T5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4M8AP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7N3CZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9UVDZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LS1NQA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT1D4B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SKC4TM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCFV76' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF9Q1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQWD9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1ZM88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WE07RT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YCK7VH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJE6Q6' => 'arhy', 'AT1G28240' => 'ath', 'AT1G34550' => 'ath', 'AT1G53040' => 'ath', 'AT2G02910' => 'ath', 'AT4G09630' => 'ath', 'AT4G38500' => 'ath', 'AT5G42660' => 'ath', 'AT5G46220' => 'ath', 'ATR0152G026' => 'atr', 'ATR0564G343' => 'atr', 'ATR0706G151' => 'atr', 'ATR0733G207' => 'atr', 'ATR0751G234' => 'atr', 'ATR0807G048' => 'atr', 'ATR1091G084' => 'atr', 'Atru.chr10.1229' => 'acertr', 'Atru.chr10.1230' => 'acertr', 'Atru.chr10.1874' => 'acertr', 'Atru.chr11.1808' => 'acertr', 'Atru.chr13.1795' => 'acertr', 'Atru.chr13.570' => 'acertr', 'Atru.chr2.2608' => 'acertr', 'Atru.chr2.2609' => 'acertr', 'Atru.chr5.3428' => 'acertr', 'Atru.chr8.1171' => 'acertr', 'AUR62004651' => 'cqu', 'AUR62008675' => 'cqu', 'AUR62010014' => 'cqu', 'AUR62013004' => 'cqu', 'AUR62014825' => 'cqu', 'AUR62015015' => 'cqu', 'AUR62015151' => 'cqu', 'AUR62017020' => 'cqu', 'AUR62019422' => 'cqu', 'AUR62023570' => 'cqu', 'AUR62025571' => 'cqu', 'AUR62029098' => 'cqu', 'AUR62033863' => 'cqu', 'AUR62034296' => 'cqu', 'AUR62040075' => 'cqu', 'BcaB02g07334' => 'bca', 'BcaB02g10575' => 'bca', 'BcaB03g12119' => 'bca', 'BcaB03g12120' => 'bca', 'BcaB03g13945' => 'bca', 'BcaB04g17123' => 'bca', 'BcaB04g17867' => 'bca', 'BcaB04g19839' => 'bca', 'BcaB07g30317' => 'bca', 'BcaB07g32432' => 'bca', 'BcaB07g33362' => 'bca', 'BcaB08g36611' => 'bca', 'BcaC01g00028' => 'bca', 'BcaC01g01356' => 'bca', 'BcaC01g02034' => 'bca', 'BcaC01g06051' => 'bca', 'BcaC03g16839' => 'bca', 'BcaC03g17176' => 'bca', 'BcaC05g26829' => 'bca', 'BcaC06g31490' => 'bca', 'BcaC06g35344' => 'bca', 'BcaC06g36570' => 'bca', 'BcaC07g37537' => 'bca', 'BcaC08g43491' => 'bca', 'BcaC08g43773' => 'bca', 'BcaNung00234' => 'bca', 'BcaNung01982' => 'bca', 'BcaNung03707' => 'bca', 'BcaNung06454' => 'bca', 'BolC2t10762H' => 'bol', 'BolC2t11191H' => 'bol', 'BolC3t14322H' => 'bol', 'BolC3t19747H' => 'bol', 'BolC3t21425H' => 'bol', 'BolC4t27800H' => 'bol', 'BolC5t31423H' => 'bol', 'BolC6t35951H' => 'bol', 'BolC6t36282H' => 'bol', 'BolC7t40678H' => 'bol', 'BolC7t40679H' => 'bol', 'BolC7t42222H' => 'bol', 'BolC7t43492H' => 'bol', 'BolC7t46785H' => 'bol', 'BolC8t47853H' => 'bol', 'BolC9t56805H' => 'bol', 'BraA02t08000Z' => 'bra', 'BraA02t08341Z' => 'bra', 'BraA03t10936Z' => 'bra', 'BraA03t15657Z' => 'bra', 'BraA04t18100Z' => 'bra', 'BraA05t20523Z' => 'bra', 'BraA06t23353Z' => 'bra', 'BraA06t27473Z' => 'bra', 'BraA06t27769Z' => 'bra', 'BraA07t28928Z' => 'bra', 'BraA08t32236Z' => 'bra', 'BraA08t32841Z' => 'bra', 'BraA08t34524Z' => 'bra', 'BraA09t38742Z' => 'bra', 'BraA09t39295Z' => 'bra', 'C02p47180' => 'bna', 'C02p50990' => 'bna', 'C03p19360' => 'bna', 'C03p74950' => 'bna', 'C03p91000' => 'bna', 'C04p63260' => 'bna', 'C05p27050' => 'bna', 'C06p08750' => 'bna', 'C06p11490' => 'bna', 'C07p02820' => 'bna', 'C07p17180' => 'bna', 'C07p29440' => 'bna', 'C07p63730' => 'bna', 'C09p39260' => 'bna', 'CAN.G1164.34' => 'can', 'CAN.G1164.39' => 'can', 'CAN.G1530.3' => 'can', 'CAN.G162.61' => 'can', 'CAN.G176.6' => 'can', 'CAN.G289.49' => 'can', 'CAN.G370.21' => 'can', 'CAN.G370.22' => 'can', 'CAN.G371.117' => 'can', 'CAN.G58.37' => 'can', 'CAN.G588.98' => 'can', 'CANSAT21G2266' => 'cansat', 'CANSAT25G2799' => 'cansat', 'CANSAT35G0862' => 'cansat', 'CANSAT35G1704' => 'cansat', 'CANSAT35G1760' => 'cansat', 'CANSAT56G3971' => 'cansat', 'CANSAT56G4116' => 'cansat', 'CANSAT80G1259' => 'cansat', 'CARHR027730' => 'chi', 'CARHR033880' => 'chi', 'CARHR043270' => 'chi', 'CARHR145330' => 'chi', 'CARHR145340' => 'chi', 'CARHR175570' => 'chi', 'CARHR181570' => 'chi', 'CARHR258470' => 'chi', 'CARHR260490' => 'chi', 'CARHR294220' => 'chi', 'Carub.0001s2668' => 'cru', 'Carub.0001s3257' => 'cru', 'Carub.0001s4220' => 'cru', 'Carub.0005s0179' => 'cru', 'Carub.0006s2807' => 'cru', 'Carub.0007s0039' => 'cru', 'Carub.0008s0169' => 'cru', 'Carub.0008s0636' => 'cru', 'Ca_00338_v3' => 'car', 'Ca_00542_v3' => 'car', 'Ca_01844_v3' => 'car', 'Ca_10611_v3' => 'car', 'Ca_13326_v3' => 'car', 'Ca_17944_v3' => 'car', 'Ca_18546_v3' => 'car', 'Ca_24219_v3' => 'car', 'Ca_29972_v3' => 'car', 'CBR_g3681' => 'cbr', 'CBR_g40021' => 'cbr', 'Cc01_g08140' => 'ccan', 'Cc02_g13410' => 'ccan', 'Cc02_g37480' => 'ccan', 'Cc05_g12030' => 'ccan', 'Cc09_g03370' => 'ccan', 'Cc09_g10300' => 'ccan', 'Cc10_g03530' => 'ccan', 'Cc10_g11380' => 'ccan', 'CDE01G0176' => 'cde', 'CDE02G0675' => 'cde', 'CDE02G0942' => 'cde', 'CDE02G1153' => 'cde', 'CDE02G4177' => 'cde', 'CDE04G2117' => 'cde', 'CDE04G2736' => 'cde', 'CDE08G1161' => 'cde', 'CDE09G1238' => 'cde', 'Cfa000467' => 'cfa', 'Cfa000947' => 'cfa', 'Cfa004969' => 'cfa', 'Cfa005284' => 'cfa', 'Cfa008993' => 'cfa', 'Cfa018187' => 'cfa', 'Cfa018454' => 'cfa', 'Cfa020585' => 'cfa', 'Ciclev10000424m.g' => 'ccl', 'Ciclev10003605m.g' => 'ccl', 'Ciclev10007828m.g' => 'ccl', 'Ciclev10014620m.g' => 'ccl', 'Ciclev10015169m.g' => 'ccl', 'Ciclev10018291m.g' => 'ccl', 'Ciclev10028256m.g' => 'ccl', 'Ciclev10033822m.g' => 'ccl', 'CiPaw.05G060300' => 'cil', 'CiPaw.05G085000' => 'cil', 'CiPaw.06G083700' => 'cil', 'CiPaw.06G120300' => 'cil', 'CiPaw.09G060500' => 'cil', 'CiPaw.09G123800' => 'cil', 'CiPaw.11G169700' => 'cil', 'CiPaw.12G118300' => 'cil', 'CiPaw.15G071000' => 'cil', 'CiPaw.15G081900' => 'cil', 'ClCG01G024610' => 'cla', 'ClCG03G006070' => 'cla', 'ClCG05G019250' => 'cla', 'ClCG09G009500' => 'cla', 'ClCG11G008200' => 'cla', 'ClCG11G018080' => 'cla', 'COL.COLO4_17373' => 'col', 'COL.COLO4_22994' => 'col', 'COL.COLO4_26389' => 'col', 'COL.COLO4_27170' => 'col', 'COL.COLO4_31074' => 'col', 'COL.COLO4_31465' => 'col', 'COL.COLO4_36438' => 'col', 'COL.COLO4_36439' => 'col', 'Cpa.g.c38781' => 'cpa', 'Cpa.g.sc128.12' => 'cpa', 'Cpa.g.sc166.7' => 'cpa', 'Cpa.g.sc166.8' => 'cpa', 'Cpa.g.sc20.111' => 'cpa', 'Cpa.g.sc27.31' => 'cpa', 'Cpa.g.sc64.36' => 'cpa', 'Cpa.g.sc64.37' => 'cpa', 'Cpa.g.sc66.49' => 'cpa', 'Cpa.g.sc80.64' => 'cpa', 'CsaV3_1G012320' => 'csa', 'CsaV3_2G008480' => 'csa', 'CsaV3_2G033450' => 'csa', 'CsaV3_3G044830' => 'csa', 'CsaV3_4G033710' => 'csa', 'CsaV3_6G051730' => 'csa', 'CsaV3_7G025350' => 'csa', 'CSS0001067' => 'camsi', 'CSS0005996' => 'camsi', 'CSS0006590' => 'camsi', 'CSS0009673' => 'camsi', 'CSS0010201' => 'camsi', 'CSS0010549' => 'camsi', 'CSS0011364' => 'camsi', 'CSS0014473' => 'camsi', 'CSS0014961' => 'camsi', 'CSS0020191' => 'camsi', 'CSS0021165' => 'camsi', 'CSS0022306' => 'camsi', 'CSS0030591' => 'camsi', 'CSS0030696' => 'camsi', 'CSS0032653' => 'camsi', 'CSS0037487' => 'camsi', 'CSS0041102' => 'camsi', 'CSS0041261' => 'camsi', 'CSS0046246' => 'camsi', 'CSS0049256' => 'camsi', 'DCAR_004075' => 'dca', 'DCAR_011538' => 'dca', 'DCAR_019553' => 'dca', 'DCAR_020952' => 'dca', 'DCAR_021739' => 'dca', 'DCAR_027407' => 'dca', 'DCAR_027913' => 'dca', 'DCAR_028066' => 'dca', 'Dinv05899' => 'din', 'Dinv07563' => 'din', 'Dinv08010' => 'din', 'Dinv14125' => 'din', 'Dinv20172' => 'din', 'Dinv30743' => 'din', 'Dinv31229' => 'din', 'Dinv34162' => 'din', 'Dinv36028' => 'din', 'Dinv39368' => 'din', 'Dinv40565' => 'din', 'Dinv41706' => 'din', 'Duzib052G0089' => 'dzi', 'Duzib116G0641' => 'dzi', 'Duzib132G0069' => 'dzi', 'Duzib132G1219' => 'dzi', 'Duzib147G0278' => 'dzi', 'Duzib160G0480' => 'dzi', 'Duzib170G0661' => 'dzi', 'Duzib177G0591' => 'dzi', 'Duzib187G1353' => 'dzi', 'Duzib192G0858' => 'dzi', 'Duzib192G0883' => 'dzi', 'Duzib213G0506' => 'dzi', 'Duzib235G0289' => 'dzi', 'Duzib251G0422' => 'dzi', 'ECA232G3898' => 'eca', 'ECA233G5950' => 'eca', 'ECA234G1699' => 'eca', 'ECA234G2421' => 'eca', 'ECA236G0426' => 'eca', 'ECA236G4331' => 'eca', 'ECA248G2573' => 'eca', 'EL10Ac1g00077' => 'bvu', 'EL10Ac1g01746' => 'bvu', 'EL10Ac2g03464' => 'bvu', 'EL10Ac4g08176' => 'bvu', 'EL10Ac7g17521' => 'bvu', 'EL10Ac8g20386' => 'bvu', 'EL10Ac9g21343' => 'bvu', 'EL10Ac9g22688' => 'bvu', 'Eucgr.B03434' => 'egr', 'Eucgr.D00618' => 'egr', 'Eucgr.E02395' => 'egr', 'Eucgr.F01129' => 'egr', 'Eucgr.F02622' => 'egr', 'Eucgr.F04207' => 'egr', 'FAN01G0570' => 'fan', 'FAN03G3351' => 'fan', 'FAN06G3702' => 'fan', 'FAN07G2149' => 'fan', 'FAN10G3758' => 'fan', 'FAN11G1170' => 'fan', 'FAN11G2050' => 'fan', 'FAN11G2724' => 'fan', 'FAN12G1700' => 'fan', 'FAN12G2028' => 'fan', 'FAN15G1160' => 'fan', 'FAN15G3063' => 'fan', 'FAN16G2540' => 'fan', 'FAN16G3077' => 'fan', 'FAN16G3624' => 'fan', 'FAN17G0221' => 'fan', 'FAN20G2492' => 'fan', 'FAN20G2905' => 'fan', 'FAN21G0548' => 'fan', 'FAN21G1300' => 'fan', 'FAN22G0077' => 'fan', 'FAN22G1315' => 'fan', 'FAN24G1280' => 'fan', 'FAN24G1445' => 'fan', 'FAN24G3527' => 'fan', 'FAN25G0464' => 'fan', 'FAN25G2885' => 'fan', 'FAN25G3270' => 'fan', 'FAN27G1101' => 'fan', 'FAN27G2846' => 'fan', 'FAN27G3524' => 'fan', 'FvH4_2g11770' => 'fve', 'FvH4_2g15630' => 'fve', 'FvH4_3g05570' => 'fve', 'FvH4_3g09110' => 'fve', 'FvH4_3g19940' => 'fve', 'FvH4_4g04821' => 'fve', 'FvH4_4g31480' => 'fve', 'FvH4_7g01740' => 'fve', 'Glyma.05G130400' => 'gma', 'Glyma.05G156400' => 'gma', 'Glyma.07G197000' => 'gma', 'Glyma.08G085151' => 'gma', 'Glyma.08G114500' => 'gma', 'Glyma.08G300400' => 'gma', 'Glyma.10G215800' => 'gma', 'Glyma.12G224400' => 'gma', 'Glyma.13G179300' => 'gma', 'Glyma.13G218151' => 'gma', 'Glyma.13G238800' => 'gma', 'Glyma.13G276900' => 'gma', 'Glyma.14G078200' => 'gma', 'Glyma.15G074500' => 'gma', 'Glyma.15G094100' => 'gma', 'Glyma.17G247200' => 'gma', 'Glyma.18G120100' => 'gma', 'Glyma.20G176000' => 'gma', 'Gohir.A01G063600' => 'ghi', 'Gohir.A01G170301' => 'ghi', 'Gohir.A02G060500' => 'ghi', 'Gohir.A05G133850' => 'ghi', 'Gohir.A05G161400' => 'ghi', 'Gohir.A06G012900' => 'ghi', 'Gohir.A06G035901' => 'ghi', 'Gohir.A06G127100' => 'ghi', 'Gohir.A06G210500' => 'ghi', 'Gohir.A08G008650' => 'ghi', 'Gohir.A09G072700' => 'ghi', 'Gohir.A09G088301' => 'ghi', 'Gohir.A10G040600' => 'ghi', 'Gohir.A12G036300' => 'ghi', 'Gohir.A12G143350' => 'ghi', 'Gohir.A12G165500' => 'ghi', 'Gohir.A13G145700' => 'ghi', 'Gohir.D01G050000' => 'ghi', 'Gohir.D01G051366' => 'ghi', 'Gohir.D01G161350' => 'ghi', 'Gohir.D02G065900' => 'ghi', 'Gohir.D05G164200' => 'ghi', 'Gohir.D05G355500' => 'ghi', 'Gohir.D06G010400' => 'ghi', 'Gohir.D06G111250' => 'ghi', 'Gohir.D06G132000' => 'ghi', 'Gohir.D06G210500' => 'ghi', 'Gohir.D07G165675' => 'ghi', 'Gohir.D08G062240' => 'ghi', 'Gohir.D08G086101' => 'ghi', 'Gohir.D08G138060' => 'ghi', 'Gohir.D09G072300' => 'ghi', 'Gohir.D10G041400' => 'ghi', 'Gohir.D11G191020' => 'ghi', 'Gohir.D11G212066' => 'ghi', 'Gohir.D12G036300' => 'ghi', 'Gohir.D12G168600' => 'ghi', 'Gohir.D13G150600' => 'ghi', 'Gorai.001G057300' => 'gra', 'Gorai.002G069900' => 'gra', 'Gorai.002G200000' => 'gra', 'Gorai.003G067600' => 'gra', 'Gorai.005G074800' => 'gra', 'Gorai.006G087300' => 'gra', 'Gorai.008G037500' => 'gra', 'Gorai.008G181400' => 'gra', 'Gorai.009G169400' => 'gra', 'Gorai.009G387900' => 'gra', 'Gorai.010G013300' => 'gra', 'Gorai.010G153800' => 'gra', 'Gorai.010G255800' => 'gra', 'Gorai.011G043700' => 'gra', 'Gorai.011G198900' => 'gra', 'Gorai.013G168400' => 'gra', 'GSVIVG01005212001' => 'vvi', 'GSVIVG01006163001' => 'vvi', 'GSVIVG01009625001' => 'vvi', 'GSVIVG01014338001' => 'vvi', 'GSVIVG01020005001' => 'vvi', 'GSVIVG01021450001' => 'vvi', 'GSVIVG01023975001' => 'vvi', 'GSVIVG01034490001' => 'vvi', 'HanXRQChr04g0112071' => 'han', 'HanXRQChr05g0131151' => 'han', 'HanXRQChr09g0262371' => 'han', 'HanXRQChr09g0268401' => 'han', 'HanXRQChr10g0279241' => 'han', 'HanXRQChr10g0297961' => 'han', 'HanXRQChr11g0326231' => 'han', 'HanXRQChr11g0328471' => 'han', 'HanXRQChr16g0507941' => 'han', 'HanXRQChr17g0560211' => 'han', 'Haze_02108' => 'cav', 'Haze_02428' => 'cav', 'Haze_05593' => 'cav', 'Haze_06448' => 'cav', 'Haze_09427' => 'cav', 'Haze_12022' => 'cav', 'Haze_17612' => 'cav', 'Haze_17928' => 'cav', 'Hma1.2p1_0032F.1_g019250' => 'hma', 'Hma1.2p1_0163F.1_g072690' => 'hma', 'Hma1.2p1_0265F.1_g106710' => 'hma', 'Hma1.2p1_0286F.1_g113970' => 'hma', 'Hma1.2p1_0363F.1_g136640' => 'hma', 'Hma1.2p1_0584F.1_g183470' => 'hma', 'Hma1.2p1_0885F.1_g232570' => 'hma', 'HPP92_006022' => 'vpl', 'HPP92_007320' => 'vpl', 'HPP92_011521' => 'vpl', 'HPP92_019387' => 'vpl', 'HPP92_024038' => 'vpl', 'Hund05891' => 'sun', 'Hund06450' => 'sun', 'Hund12053' => 'sun', 'Hund16800' => 'sun', 'Hund21222' => 'sun', 'Hund22896' => 'sun', 'Hund23746' => 'sun', 'Hund27083' => 'sun', 'Lalb_Chr02g0141831' => 'lal', 'Lalb_Chr02g0141841' => 'lal', 'Lalb_Chr05g0220411' => 'lal', 'Lalb_Chr06g0162081' => 'lal', 'Lalb_Chr09g0327651' => 'lal', 'Lalb_Chr13g0295051' => 'lal', 'Lalb_Chr15g0086801' => 'lal', 'Lalb_Chr16g0383781' => 'lal', 'Lalb_Chr16g0383791' => 'lal', 'Lalb_Chr18g0055441' => 'lal', 'Lalb_Chr18g0059611' => 'lal', 'Lalb_Chr20g0109661' => 'lal', 'Lalb_Chr20g0109831' => 'lal', 'Lalb_Chr20g0121871' => 'lal', 'Lalb_Chr22g0355361' => 'lal', 'Lalb_Chr25g0286371' => 'lal', 'Lj1A1187G43' => 'lonja', 'Lj1A1205T50' => 'lonja', 'Lj1A800G33' => 'lonja', 'Lj1C1187T7' => 'lonja', 'Lj1C843T11' => 'lonja', 'Lj1g0010940' => 'lja', 'Lj2A288T69' => 'lonja', 'Lj3g0024276' => 'lja', 'Lj4A47T76' => 'lonja', 'Lj4g0005805' => 'lja', 'Lj4g0006097' => 'lja', 'Lj4g0008528' => 'lja', 'Lj4g0024907' => 'lja', 'Lj5g0012472' => 'lja', 'Lj5g0018648' => 'lja', 'Lj6C789G1' => 'lonja', 'Lj6g0004000' => 'lja', 'Lj7A292G67' => 'lonja', 'Lj7A292T64' => 'lonja', 'Lj9A400T58' => 'lonja', 'Lsat_1_v5_gn_1_126181' => 'lsa', 'Lsat_1_v5_gn_4_123041' => 'lsa', 'Lsat_1_v5_gn_4_133620' => 'lsa', 'Lsat_1_v5_gn_4_53221' => 'lsa', 'Lsat_1_v5_gn_4_71961' => 'lsa', 'Lsat_1_v5_gn_7_105241' => 'lsa', 'Lsat_1_v5_gn_7_21361' => 'lsa', 'Lsat_1_v5_gn_7_28860' => 'lsa', 'Lsat_1_v5_gn_7_31260' => 'lsa', 'Lsat_1_v5_gn_8_52801' => 'lsa', 'Manes.02G191400' => 'mes', 'Manes.03G110100' => 'mes', 'Manes.04G071100' => 'mes', 'Manes.05G100500' => 'mes', 'Manes.05G164700' => 'mes', 'Manes.15G087000' => 'mes', 'Manes.15G121500' => 'mes', 'Manes.16G028300' => 'mes', 'Manes.17G046100' => 'mes', 'Manes.17G069800' => 'mes', 'Manes.18G100500' => 'mes', 'Mapoly0002s0109' => 'mpo', 'Mapoly0024s0007' => 'mpo', 'Mapoly0089s0032' => 'mpo', 'MBI04_g42241_MAGBIO' => 'mbi', 'MBI05_g11988_MAGBIO' => 'mbi', 'MBI05_g35452_MAGBIO' => 'mbi', 'MBI07_g30179_MAGBIO' => 'mbi', 'MBI07_g35859_MAGBIO' => 'mbi', 'MBI07_g35860_MAGBIO' => 'mbi', 'MBI07_g37166_MAGBIO' => 'mbi', 'MBI08_g18172_MAGBIO' => 'mbi', 'MBI09_g08441_MAGBIO' => 'mbi', 'MBI13_g01676_MAGBIO' => 'mbi', 'MBI14_g42955_MAGBIO' => 'mbi', 'MBI16_g13161_MAGBIO' => 'mbi', 'MBI17_g27204_MAGBIO' => 'mbi', 'MBI19_g21595_MAGBIO' => 'mbi', 'MD00G1148400' => 'mdo', 'MD02G1301200' => 'mdo', 'MD03G1227800' => 'mdo', 'MD05G1041100' => 'mdo', 'MD05G1124800' => 'mdo', 'MD05G1284000' => 'mdo', 'MD05G1338800' => 'mdo', 'MD05G1338900' => 'mdo', 'MD07G1022800' => 'mdo', 'MD10G1047500' => 'mdo', 'MD10G1127500' => 'mdo', 'MD10G1262300' => 'mdo', 'MD10G1293800' => 'mdo', 'MD16G1074300' => 'mdo', 'Medtr1g021670' => 'mtr', 'Medtr1g096320' => 'mtr', 'Medtr2g013690' => 'mtr', 'Medtr2g019450' => 'mtr', 'Medtr2g085170' => 'mtr', 'Medtr4g088785' => 'mtr', 'Medtr8g055930' => 'mtr', 'Medtr8g085850' => 'mtr', 'MELO3C002605.2' => 'cme', 'MELO3C003891.2' => 'cme', 'MELO3C004012.2' => 'cme', 'MELO3C007134.2' => 'cme', 'MELO3C008118.2' => 'cme', 'MELO3C016700.2' => 'cme', 'MELO3C024127.2' => 'cme', 'MELO3C033361.2' => 'cme', 'MELO3C033362.2' => 'cme', 'Migut.C00430' => 'egut', 'Migut.C01246' => 'egut', 'Migut.E00101' => 'egut', 'Migut.H01486' => 'egut', 'Migut.H01939' => 'egut', 'Migut.K00360' => 'egut', 'Migut.M00910' => 'egut', 'Migut.M01139' => 'egut', 'Migut.N02677' => 'egut', 'MSTRG.13252' => 'ama', 'MSTRG.14701' => 'ama', 'MSTRG.1521' => 'ama', 'MSTRG.15884' => 'ama', 'MSTRG.16242' => 'ama', 'MSTRG.22285' => 'ama', 'MSTRG.22444' => 'ama', 'MSTRG.2349' => 'ama', 'MSTRG.26308' => 'ama', 'MSTRG.28296' => 'ama', 'MSTRG.9895' => 'ama', 'Nitab4.5_0000110g0060' => 'nta', 'Nitab4.5_0000420g0130' => 'nta', 'Nitab4.5_0000422g0030' => 'nta', 'Nitab4.5_0000560g0180' => 'nta', 'Nitab4.5_0000703g0100' => 'nta', 'Nitab4.5_0000786g0200' => 'nta', 'Nitab4.5_0001336g0020' => 'nta', 'Nitab4.5_0001796g0030' => 'nta', 'Nitab4.5_0003348g0060' => 'nta', 'Nitab4.5_0003698g0040' => 'nta', 'Nitab4.5_0003942g0090' => 'nta', 'Nitab4.5_0004775g0070' => 'nta', 'Nitab4.5_0004864g0030' => 'nta', 'Nitab4.5_0005615g0020' => 'nta', 'Nitab4.5_0009288g0030' => 'nta', 'Nitab4.5_0009341g0010' => 'nta', 'Nitab4.5_0009535g0010' => 'nta', 'Nn1g03995' => 'nnu', 'Nn1g04100' => 'nnu', 'Nn1g06530' => 'nnu', 'Nn3g16404' => 'nnu', 'Nn3g17212' => 'nnu', 'Nn3g20776' => 'nnu', 'Nn3g21923' => 'nnu', 'Nn5g27737' => 'nnu', 'Nn5g29461' => 'nnu', 'Nn7g38355' => 'nnu', 'Nn8g39873' => 'nnu', 'Oeu000548.2' => 'oeu', 'Oeu004672.1' => 'oeu', 'Oeu015605.2' => 'oeu', 'Oeu016092.1' => 'oeu', 'Oeu017879.3' => 'oeu', 'Oeu024910.1' => 'oeu', 'Oeu028965.1' => 'oeu', 'Oeu031269.1' => 'oeu', 'Oeu031270.1' => 'oeu', 'Oeu032535.1' => 'oeu', 'Oeu034151.1' => 'oeu', 'Oeu034152.1' => 'oeu', 'Oeu034588.2' => 'oeu', 'Oeu050846.1' => 'oeu', 'Oeu050849.2' => 'oeu', 'Oeu051063.2' => 'oeu', 'Oeu052368.1' => 'oeu', 'Oeu052370.1' => 'oeu', 'Os01g0210400' => 'osa', 'Os01g0304300' => 'osa', 'Os01g0749100' => 'osa', 'Os02g0745800' => 'osa', 'Os03g0769050' => 'osa', 'Os05g0531500' => 'osa', 'Os06g0724300' => 'osa', 'Os11g0198100' => 'osa', 'Peaxi162Scf00069g01425' => 'pax', 'Peaxi162Scf00280g00811' => 'pax', 'Peaxi162Scf00310g00615' => 'pax', 'Peaxi162Scf00362g00542' => 'pax', 'Peaxi162Scf00461g00310' => 'pax', 'Peaxi162Scf00530g00118' => 'pax', 'Peaxi162Scf00541g00057' => 'pax', 'Peaxi162Scf00661g00017' => 'pax', 'Peaxi162Scf00926g00027' => 'pax', 'Peaxi162Scf01064g00263' => 'pax', 'Peaxi162Scf01211g00135' => 'pax', 'PGR004G2336' => 'pgr', 'PGR042G0327' => 'pgr', 'PGR042G1957' => 'pgr', 'PGR042G2003' => 'pgr', 'PGR042G3929' => 'pgr', 'PGR083G1137' => 'pgr', 'PGR083G1364' => 'pgr', 'PGSC0003DMG400003381' => 'stu', 'PGSC0003DMG400003417' => 'stu', 'PGSC0003DMG400008981' => 'stu', 'PGSC0003DMG400012417' => 'stu', 'PGSC0003DMG400012823' => 'stu', 'PGSC0003DMG400016885' => 'stu', 'PGSC0003DMG400022812' => 'stu', 'PGSC0003DMG400029726' => 'stu', 'PGSC0003DMG401009243' => 'stu', 'PGSC0003DMG401031505' => 'stu', 'PGSC0003DMG402031505' => 'stu', 'Phvul.001G017600' => 'pvu', 'Phvul.002G193500' => 'pvu', 'Phvul.002G228900' => 'pvu', 'Phvul.002G236800' => 'pvu', 'Phvul.003G049500' => 'pvu', 'Phvul.005G072000' => 'pvu', 'Phvul.006G164800' => 'pvu', 'Phvul.006G185100' => 'pvu', 'Phvul.007G090000' => 'pvu', 'Potri.001G399800' => 'ptr', 'Potri.002G149900' => 'ptr', 'Potri.004G044100' => 'ptr', 'Potri.004G177600' => 'ptr', 'Potri.009G138000' => 'ptr', 'Potri.010G094000' => 'ptr', 'Potri.011G053000' => 'ptr', 'Potri.011G119300' => 'ptr', 'Potri.013G113700' => 'ptr', 'Potri.018G107800' => 'ptr', 'Potri.019G084100' => 'ptr', 'Pp3c14_23720' => 'ppa', 'Pp3c16_6340' => 'ppa', 'Pp3c23_13420' => 'ppa', 'Pp3c24_2740' => 'ppa', 'Pp3c25_860' => 'ppa', 'Pp3c8_21750' => 'ppa', 'Prupe.1G273000' => 'ppe', 'Prupe.1G273700' => 'ppe', 'Prupe.1G274100' => 'ppe', 'Prupe.2G023300' => 'ppe', 'Prupe.4G048000' => 'ppe', 'Prupe.4G080400' => 'ppe', 'Prupe.4G181200' => 'ppe', 'Prupe.8G056900' => 'ppe', 'Prupe.8G168700' => 'ppe', 'Psat1g189080' => 'psa', 'Psat1g204760' => 'psa', 'Psat4g175560' => 'psa', 'Psat4g177720' => 'psa', 'Psat5g244240' => 'psa', 'Psat6g010720' => 'psa', 'Psat6g187200' => 'psa', 'Psat7g072040' => 'psa', 'PSO017G3501' => 'pso', 'PSO063G2148' => 'pso', 'PSO063G5608' => 'pso', 'PSO210G6392' => 'pso', 'PSO541G2319' => 'pso', 'PSO541G2836' => 'pso', 'PSO541G4012' => 'pso', 'PSO541G6253' => 'pso', 'PSO675G0580' => 'pso', 'PSO675G0856' => 'pso', 'PSO675G5635' => 'pso', 'PSO675G9157' => 'pso', 'PSO832G1660' => 'pso', 'PSO832G1969' => 'pso', 'QL02p007186' => 'qlo', 'QL02p033904' => 'qlo', 'QL03p064391' => 'qlo', 'QL05p040593' => 'qlo', 'QL05p058242' => 'qlo', 'QL08p021825' => 'qlo', 'QL11p004981' => 'qlo', 'RcHm_v2.0_Chr1g0318301' => 'rch', 'RcHm_v2.0_Chr4g0418501' => 'rch', 'RcHm_v2.0_Chr4g0439971' => 'rch', 'RcHm_v2.0_Chr5g0008541' => 'rch', 'RcHm_v2.0_Chr5g0014101' => 'rch', 'RcHm_v2.0_Chr5g0014131' => 'rch', 'RcHm_v2.0_Chr5g0033621' => 'rch', 'RcHm_v2.0_Chr6g0272041' => 'rch', 'RcHm_v2.0_Chr6g0278831' => 'rch', 'Rhsim02G0130400' => 'rsi', 'Rhsim02G0171100' => 'rsi', 'Rhsim05G0053000' => 'rsi', 'Rhsim05G0053100' => 'rsi', 'Rhsim06G0096500' => 'rsi', 'Rhsim06G0096600' => 'rsi', 'Rhsim06G0199100' => 'rsi', 'Rhsim12G0062300' => 'rsi', 'Rhsim12G0062800' => 'rsi', 'Sabra02G0118600' => 'sbr', 'Sabra04G0027300' => 'sbr', 'Sabra04G0119500' => 'sbr', 'Sabra08G0112500' => 'sbr', 'Sabra11G0036800' => 'sbr', 'Sabra11G0103800' => 'sbr', 'Sabra13G0096300' => 'sbr', 'Sabra16G0262300' => 'sbr', 'Sabra18G0091700' => 'sbr', 'Sabra19G0095400' => 'sbr', 'SalBow6G3080' => 'sbo', 'SalBow7G1157' => 'sbo', 'SalBow7G2123' => 'sbo', 'SalBow7G2285' => 'sbo', 'SalBow7G3537' => 'sbo', 'SalBow8G2947' => 'sbo', 'SalBow8G4463' => 'sbo', 'SalBow8G5466' => 'sbo', 'Sc01g0001750' => 'sci', 'Sc02g0006640' => 'sci', 'Sc02g0006670' => 'sci', 'Sc04g0008220' => 'sci', 'Sc05g0006190' => 'sci', 'Sc08g0002760' => 'sci', 'Sc17g0006170' => 'sci', 'Sc22g0002050' => 'sci', 'Sc23g0001190' => 'sci', 'Sc24g0000980' => 'sci', 'Sed0006245' => 'sed', 'Sed0007543' => 'sed', 'Sed0009411' => 'sed', 'Sed0010765' => 'sed', 'Sed0012944' => 'sed', 'Sed0014682' => 'sed', 'Sed0016174' => 'sed', 'Sed0016796' => 'sed', 'Sed0020317' => 'sed', 'Sed0021467' => 'sed', 'SEGI_01316' => 'sgi', 'SEGI_03374' => 'sgi', 'SEGI_16265' => 'sgi', 'SEGI_18569' => 'sgi', 'SEGI_20351' => 'sgi', 'SEGI_26395' => 'sgi', 'SEGI_29469' => 'sgi', 'SEGI_34771' => 'sgi', 'SEGI_36769' => 'sgi', 'SEGI_37139' => 'sgi', 'SGA_v2.0_scaffold100G29687' => 'sas', 'SGA_v2.0_scaffold118G32472' => 'sas', 'SGA_v2.0_scaffold14G07051' => 'sas', 'SGA_v2.0_scaffold183G39845' => 'sas', 'SGA_v2.0_scaffold1G00174' => 'sas', 'SGA_v2.0_scaffold22G09714' => 'sas', 'SGA_v2.0_scaffold333G48992' => 'sas', 'SGA_v2.0_scaffold46G17491' => 'sas', 'SGA_v2.0_scaffold49G18294' => 'sas', 'SGA_v2.0_scaffold63G21658' => 'sas', 'SHI01741' => 'shi', 'SHI05771' => 'shi', 'SHI18077' => 'shi', 'SHI20525' => 'shi', 'SHI20527' => 'shi', 'SHI20528' => 'shi', 'SMO172G0185' => 'smo', 'SMO198G0020' => 'smo', 'SMO351G0006' => 'smo', 'SMO356G0118' => 'smo', 'SMO358G0296' => 'smo', 'SMO367G0079' => 'smo', 'SMO367G1277' => 'smo', 'Solyc01g014220.3' => 'sly', 'Solyc01g111770.2' => 'sly', 'Solyc02g078180.3' => 'sly', 'Solyc03g006430.3' => 'sly', 'Solyc03g006456.1' => 'sly', 'Solyc03g079860.2' => 'sly', 'Solyc04g079770.3' => 'sly', 'Solyc05g007430.4' => 'sly', 'Solyc07g063150.3' => 'sly', 'Solyc08g016620.3' => 'sly', 'Solyc09g057590.3' => 'sly', 'Solyc09g057600.1' => 'sly', 'Solyc10g009050.3' => 'sly', 'Solyc11g017420.2' => 'sly', 'Sopen01g053810' => 'spe', 'Sopen02g023040' => 'spe', 'Sopen03g002440' => 'spe', 'Sopen04g033350' => 'spe', 'Sopen05g003310' => 'spe', 'Sopen07g004050' => 'spe', 'Sopen07g031340' => 'spe', 'Sopen08g006990' => 'spe', 'Sopen10g004830' => 'spe', 'Sopen11g009370' => 'spe', 'Sp1g24450' => 'spa', 'Sp1g29670' => 'spa', 'Sp1g39600' => 'spa', 'Sp2g11080' => 'spa', 'Sp2g13970' => 'spa', 'Sp4g16130' => 'spa', 'Sp6g13080' => 'spa', 'Sp7g37270' => 'spa', 'TAR371G0065' => 'tar', 'TAR376G0340' => 'tar', 'TAR376G0435' => 'tar', 'TAR381G0002' => 'tar', 'TAR381G1236' => 'tar', 'TAR624G0055' => 'tar', 'TAR624G0324' => 'tar', 'TAR624G0696' => 'tar', 'TAR624G0906' => 'tar', 'TAR625G0107' => 'tar', 'TAR626G0015' => 'tar', 'TAR626G1356' => 'tar', 'TAR627G0888' => 'tar', 'TAR628G0399' => 'tar', 'TAR628G1327' => 'tar', 'TAR629G2831' => 'tar', 'TAR629G2874' => 'tar', 'TAR633G1432' => 'tar', 'TAR633G2771' => 'tar', 'THA.LOC104803394' => 'tha', 'THA.LOC104805153' => 'tha', 'THA.LOC104806784' => 'tha', 'THA.LOC104810473' => 'tha', 'THA.LOC104813100' => 'tha', 'THA.LOC104814215' => 'tha', 'THA.LOC104815554' => 'tha', 'THA.LOC104820544' => 'tha', 'THA.LOC104824754' => 'tha', 'THA.LOC104827717' => 'tha', 'Thecc.02G031400' => 'tca', 'Thecc.02G055900' => 'tca', 'Thecc.02G350800' => 'tca', 'Thecc.06G150900' => 'tca', 'Thecc.06G186600' => 'tca', 'Thecc.07G089600' => 'tca', 'Thecc.08G020400' => 'tca', 'Thecc.08G182100' => 'tca', 'Thhalv10000873m.g' => 'esa', 'Thhalv10004185m.g' => 'esa', 'Thhalv10006981m.g' => 'esa', 'Thhalv10007204m.g' => 'esa', 'Thhalv10011374m.g' => 'esa', 'Thhalv10013482m.g' => 'esa', 'Thhalv10017801m.g' => 'esa', 'Thhalv10024983m.g' => 'esa', 'TPR.G12072' => 'tpr', 'TPR.G15769' => 'tpr', 'TPR.G16504' => 'tpr', 'TPR.G16506' => 'tpr', 'TPR.G24345' => 'tpr', 'TPR.G26666' => 'tpr', 'TPR.G27320' => 'tpr', 'TPR.G31819' => 'tpr', 'TPR.G38879' => 'tpr', 'TPR.G39015' => 'tpr', 'TPR.G8819' => 'tpr', 'TWI09G0924' => 'twi', 'TWI12G0811' => 'twi', 'TWI12G1294' => 'twi', 'TWI31G0150' => 'twi', 'TWI36G1262' => 'twi', 'TWI38G1287' => 'twi', 'TWI38G1633' => 'twi', 'TWI38G1982' => 'twi', 'TWI39G0116' => 'twi', 'TWI60G1011' => 'twi', 'TWI63G0171' => 'twi', 'TWI73G0839' => 'twi', 'TWI79G1511' => 'twi', 'unitig_0.g915' => 'ugi', 'unitig_0.g916' => 'ugi', 'unitig_21.g20219' => 'ugi', 'unitig_21.g20416' => 'ugi', 'unitig_578.g16132' => 'ugi', 'unitig_578.g16718' => 'ugi', 'unitig_62.g23481' => 'ugi', 'unitig_744.g24535' => 'ugi', 'unitig_749.g13525' => 'ugi', 'vmacro01248' => 'vma', 'vmacro02290' => 'vma', 'vmacro10946' => 'vma', 'vmacro11865' => 'vma', 'vmacro12493' => 'vma', 'vmacro17322' => 'vma', 'vmacro21599' => 'vma', 'vmacro23041' => 'vma', 'VMungo0251G0004' => 'vmu', 'VMungo0251G2639' => 'vmu', 'VMungo0251G2967' => 'vmu', 'VMungo0540G0864' => 'vmu', 'VMungo0540G1569' => 'vmu', 'VMungo0647G0317' => 'vmu', 'VMungo0720G1373' => 'vmu', 'VMungo0720G1508' => 'vmu', 'VMungo1080G0485' => 'vmu', 'VMungo1215G3177' => 'vmu', 'Zm00001eb112600' => 'zma', 'Zm00001eb120220' => 'zma', 'Zm00001eb153240' => 'zma', 'Zm00001eb168880' => 'zma', 'Zm00001eb213920' => 'zma', 'Zm00001eb228280' => 'zma', 'Zm00001eb254580' => 'zma', 'Zm00001eb272180' => 'zma', 'Zm00001eb293190' => 'zma', 'Zm00001eb322930' => 'zma', 'Zm00001eb353360' => 'zma', 'Zm00001eb353390' => 'zma', 'Zm00001eb353430' => 'zma', 'Zm00001eb353440' => 'zma', 'Zm00001eb353780' => 'zma' ) $gf_id = 'HOM05D000499' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000499' ) $data_identifier = 'HOM05D000499' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 29, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 12, 'amhyb' => (int) 8, 'aly' => (int) 12, 'aox' => (int) 9, 'arhy' => (int) 26, 'ath' => (int) 8, 'atr' => (int) 7, 'acertr' => (int) 10, 'cqu' => (int) 15, 'bca' => (int) 29, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 11, 'cansat' => (int) 8, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 9, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 8, 'cpa' => (int) 10, 'csa' => (int) 7, 'camsi' => (int) 20, 'dca' => (int) 8, 'din' => (int) 12, 'dzi' => (int) 14, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 6, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 38, 'gra' => (int) 16, 'vvi' => (int) 8, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 5, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 11, 'lja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 11, 'mpo' => (int) 3, 'mbi' => (int) 14, 'mdo' => (int) 14, 'mtr' => (int) 8, 'cme' => (int) 9, 'egut' => (int) 9, 'ama' => (int) 11, 'nta' => (int) 17, 'nnu' => (int) 11, 'oeu' => (int) 18, 'osa' => (int) 8, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 6, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 9, 'rsi' => (int) 9, 'sbr' => (int) 10, 'sbo' => (int) 8, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 10, 'sas' => (int) 10, 'shi' => (int) 6, 'smo' => (int) 7, 'sly' => (int) 14, 'spe' => (int) 10, 'spa' => (int) 8, 'tar' => (int) 19, 'tha' => (int) 10, 'tca' => (int) 8, 'esa' => (int) 8, 'tpr' => (int) 11, 'twi' => (int) 13, 'ugi' => (int) 9, 'vma' => (int) 8, 'vmu' => (int) 10, 'zma' => (int) 15 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb353780' $species_info = array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ) $local_species = 'ach' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000499', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1066', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p29780' => 'bna', 'A02p33180' => 'bna', 'A03p16470' => 'bna', 'A03p66010' => 'bna', 'A04p25970' => 'bna', 'A06p01270' => 'bna', 'A06p46080' => 'bna', 'A07p11400' => 'bna', 'A08p01840' => 'bna', 'A08p08230' => 'bna', 'A08p25740' => 'bna', 'A09p32070' => 'bna', 'A09p37830' => 'bna', 'A09p42840' => 'bna', 'A09p42850' => 'bna', 'Aa31LG10G2060' => 'aar', 'Aa31LG2G7410' => 'aar', 'Aa31LG6G10200' => 'aar', 'Aa31LG6G16680' => 'aar', 'Aa31LG6G8470' => 'aar', 'Aa31LG9G12730' => 'aar', 'Aa31LG9G13680' => 'aar', 'Aa31LG9G14920' => 'aar', 'Aa31LG9G6650' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4977' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5467' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3254' => 'aag', 'Actinidia02578' => 'ach', 'Actinidia07693' => 'ach', 'Actinidia08413' => 'ach', 'Actinidia08414' => 'ach', 'Actinidia15289' => 'ach', 'Actinidia19871' => 'ach', 'Actinidia21475' => 'ach', 'Actinidia22576' => 'ach', 'Actinidia28327' => 'ach', 'Actinidia32491' => 'ach', 'Actinidia39463' => 'ach', 'Actinidia39571' => 'ach', 'Ah.01g013750' => 'amhyb', 'Ah.01g023210' => 'amhyb', 'Ah.04g164850' => 'amhyb', 'Ah.05g178060' => 'amhyb', 'Ah.07g204270' => 'amhyb', 'Ah.07g208480' => 'amhyb', 'Ah.09g237410' => 'amhyb', 'Ah.14g089460' => 'amhyb', 'AL1G41790' => 'aly', 'AL1G49050' => 'aly', 'AL1G53810' => 'aly', 'AL1G61400' => 'aly', 'AL4G18580' => 'aly', 'AL5G12510' => 'aly', 'AL5G12540' => 'aly', 'AL6G43230' => 'aly', 'AL7G10370' => 'aly', 'AL7G19250' => 'aly', 'AL8G12240' => 'aly', 'AL8G18540' => 'aly', 'Aqoxy1G02409' => 'aox', 'Aqoxy2G03993' => 'aox', 'Aqoxy3G03357' => 'aox', 'Aqoxy4G00785' => 'aox', 'Aqoxy5G02598' => 'aox', 'Aqoxy6G00132' => 'aox', 'Aqoxy7G01776' => 'aox', 'Aqoxy7G02316' => 'aox', 'Aqoxy7G03973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.12AFKW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B8730' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27IQR1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3F75VG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3RE0GA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41TCQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.527VTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FIR39' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5W8UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DA38EV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ63HS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H1I32C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HC27T5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4M8AP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7N3CZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9UVDZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LS1NQA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT1D4B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SKC4TM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCFV76' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF9Q1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQWD9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1ZM88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WE07RT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YCK7VH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJE6Q6' => 'arhy', 'AT1G28240' => 'ath', 'AT1G34550' => 'ath', 'AT1G53040' => 'ath', 'AT2G02910' => 'ath', 'AT4G09630' => 'ath', 'AT4G38500' => 'ath', 'AT5G42660' => 'ath', 'AT5G46220' => 'ath', 'ATR0152G026' => 'atr', 'ATR0564G343' => 'atr', 'ATR0706G151' => 'atr', 'ATR0733G207' => 'atr', 'ATR0751G234' => 'atr', 'ATR0807G048' => 'atr', 'ATR1091G084' => 'atr', 'Atru.chr10.1229' => 'acertr', 'Atru.chr10.1230' => 'acertr', 'Atru.chr10.1874' => 'acertr', 'Atru.chr11.1808' => 'acertr', 'Atru.chr13.1795' => 'acertr', 'Atru.chr13.570' => 'acertr', 'Atru.chr2.2608' => 'acertr', 'Atru.chr2.2609' => 'acertr', 'Atru.chr5.3428' => 'acertr', 'Atru.chr8.1171' => 'acertr', 'AUR62004651' => 'cqu', 'AUR62008675' => 'cqu', 'AUR62010014' => 'cqu', 'AUR62013004' => 'cqu', 'AUR62014825' => 'cqu', 'AUR62015015' => 'cqu', 'AUR62015151' => 'cqu', 'AUR62017020' => 'cqu', 'AUR62019422' => 'cqu', 'AUR62023570' => 'cqu', 'AUR62025571' => 'cqu', 'AUR62029098' => 'cqu', 'AUR62033863' => 'cqu', 'AUR62034296' => 'cqu', 'AUR62040075' => 'cqu', 'BcaB02g07334' => 'bca', 'BcaB02g10575' => 'bca', 'BcaB03g12119' => 'bca', 'BcaB03g12120' => 'bca', 'BcaB03g13945' => 'bca', 'BcaB04g17123' => 'bca', 'BcaB04g17867' => 'bca', 'BcaB04g19839' => 'bca', 'BcaB07g30317' => 'bca', 'BcaB07g32432' => 'bca', 'BcaB07g33362' => 'bca', 'BcaB08g36611' => 'bca', 'BcaC01g00028' => 'bca', 'BcaC01g01356' => 'bca', 'BcaC01g02034' => 'bca', 'BcaC01g06051' => 'bca', 'BcaC03g16839' => 'bca', 'BcaC03g17176' => 'bca', 'BcaC05g26829' => 'bca', 'BcaC06g31490' => 'bca', 'BcaC06g35344' => 'bca', 'BcaC06g36570' => 'bca', 'BcaC07g37537' => 'bca', 'BcaC08g43491' => 'bca', 'BcaC08g43773' => 'bca', 'BcaNung00234' => 'bca', 'BcaNung01982' => 'bca', 'BcaNung03707' => 'bca', 'BcaNung06454' => 'bca', 'BolC2t10762H' => 'bol', 'BolC2t11191H' => 'bol', 'BolC3t14322H' => 'bol', 'BolC3t19747H' => 'bol', 'BolC3t21425H' => 'bol', 'BolC4t27800H' => 'bol', 'BolC5t31423H' => 'bol', 'BolC6t35951H' => 'bol', 'BolC6t36282H' => 'bol', 'BolC7t40678H' => 'bol', 'BolC7t40679H' => 'bol', 'BolC7t42222H' => 'bol', 'BolC7t43492H' => 'bol', 'BolC7t46785H' => 'bol', 'BolC8t47853H' => 'bol', 'BolC9t56805H' => 'bol', 'BraA02t08000Z' => 'bra', 'BraA02t08341Z' => 'bra', 'BraA03t10936Z' => 'bra', 'BraA03t15657Z' => 'bra', 'BraA04t18100Z' => 'bra', 'BraA05t20523Z' => 'bra', 'BraA06t23353Z' => 'bra', 'BraA06t27473Z' => 'bra', 'BraA06t27769Z' => 'bra', 'BraA07t28928Z' => 'bra', 'BraA08t32236Z' => 'bra', 'BraA08t32841Z' => 'bra', 'BraA08t34524Z' => 'bra', 'BraA09t38742Z' => 'bra', 'BraA09t39295Z' => 'bra', 'C02p47180' => 'bna', 'C02p50990' => 'bna', 'C03p19360' => 'bna', 'C03p74950' => 'bna', 'C03p91000' => 'bna', 'C04p63260' => 'bna', 'C05p27050' => 'bna', 'C06p08750' => 'bna', 'C06p11490' => 'bna', 'C07p02820' => 'bna', 'C07p17180' => 'bna', 'C07p29440' => 'bna', 'C07p63730' => 'bna', 'C09p39260' => 'bna', 'CAN.G1164.34' => 'can', 'CAN.G1164.39' => 'can', 'CAN.G1530.3' => 'can', 'CAN.G162.61' => 'can', 'CAN.G176.6' => 'can', 'CAN.G289.49' => 'can', 'CAN.G370.21' => 'can', 'CAN.G370.22' => 'can', 'CAN.G371.117' => 'can', 'CAN.G58.37' => 'can', 'CAN.G588.98' => 'can', 'CANSAT21G2266' => 'cansat', 'CANSAT25G2799' => 'cansat', 'CANSAT35G0862' => 'cansat', 'CANSAT35G1704' => 'cansat', 'CANSAT35G1760' => 'cansat', 'CANSAT56G3971' => 'cansat', 'CANSAT56G4116' => 'cansat', 'CANSAT80G1259' => 'cansat', 'CARHR027730' => 'chi', 'CARHR033880' => 'chi', 'CARHR043270' => 'chi', 'CARHR145330' => 'chi', 'CARHR145340' => 'chi', 'CARHR175570' => 'chi', 'CARHR181570' => 'chi', 'CARHR258470' => 'chi', 'CARHR260490' => 'chi', 'CARHR294220' => 'chi', 'Carub.0001s2668' => 'cru', 'Carub.0001s3257' => 'cru', 'Carub.0001s4220' => 'cru', 'Carub.0005s0179' => 'cru', 'Carub.0006s2807' => 'cru', 'Carub.0007s0039' => 'cru', 'Carub.0008s0169' => 'cru', 'Carub.0008s0636' => 'cru', 'Ca_00338_v3' => 'car', 'Ca_00542_v3' => 'car', 'Ca_01844_v3' => 'car', 'Ca_10611_v3' => 'car', 'Ca_13326_v3' => 'car', 'Ca_17944_v3' => 'car', 'Ca_18546_v3' => 'car', 'Ca_24219_v3' => 'car', 'Ca_29972_v3' => 'car', 'CBR_g3681' => 'cbr', 'CBR_g40021' => 'cbr', 'Cc01_g08140' => 'ccan', 'Cc02_g13410' => 'ccan', 'Cc02_g37480' => 'ccan', 'Cc05_g12030' => 'ccan', 'Cc09_g03370' => 'ccan', 'Cc09_g10300' => 'ccan', 'Cc10_g03530' => 'ccan', 'Cc10_g11380' => 'ccan', 'CDE01G0176' => 'cde', 'CDE02G0675' => 'cde', 'CDE02G0942' => 'cde', 'CDE02G1153' => 'cde', 'CDE02G4177' => 'cde', 'CDE04G2117' => 'cde', 'CDE04G2736' => 'cde', 'CDE08G1161' => 'cde', 'CDE09G1238' => 'cde', 'Cfa000467' => 'cfa', 'Cfa000947' => 'cfa', 'Cfa004969' => 'cfa', 'Cfa005284' => 'cfa', 'Cfa008993' => 'cfa', 'Cfa018187' => 'cfa', 'Cfa018454' => 'cfa', 'Cfa020585' => 'cfa', 'Ciclev10000424m.g' => 'ccl', 'Ciclev10003605m.g' => 'ccl', 'Ciclev10007828m.g' => 'ccl', 'Ciclev10014620m.g' => 'ccl', 'Ciclev10015169m.g' => 'ccl', 'Ciclev10018291m.g' => 'ccl', 'Ciclev10028256m.g' => 'ccl', 'Ciclev10033822m.g' => 'ccl', 'CiPaw.05G060300' => 'cil', 'CiPaw.05G085000' => 'cil', 'CiPaw.06G083700' => 'cil', 'CiPaw.06G120300' => 'cil', 'CiPaw.09G060500' => 'cil', 'CiPaw.09G123800' => 'cil', 'CiPaw.11G169700' => 'cil', 'CiPaw.12G118300' => 'cil', 'CiPaw.15G071000' => 'cil', 'CiPaw.15G081900' => 'cil', 'ClCG01G024610' => 'cla', 'ClCG03G006070' => 'cla', 'ClCG05G019250' => 'cla', 'ClCG09G009500' => 'cla', 'ClCG11G008200' => 'cla', 'ClCG11G018080' => 'cla', 'COL.COLO4_17373' => 'col', 'COL.COLO4_22994' => 'col', 'COL.COLO4_26389' => 'col', 'COL.COLO4_27170' => 'col', 'COL.COLO4_31074' => 'col', 'COL.COLO4_31465' => 'col', 'COL.COLO4_36438' => 'col', 'COL.COLO4_36439' => 'col', 'Cpa.g.c38781' => 'cpa', 'Cpa.g.sc128.12' => 'cpa', 'Cpa.g.sc166.7' => 'cpa', 'Cpa.g.sc166.8' => 'cpa', 'Cpa.g.sc20.111' => 'cpa', 'Cpa.g.sc27.31' => 'cpa', 'Cpa.g.sc64.36' => 'cpa', 'Cpa.g.sc64.37' => 'cpa', 'Cpa.g.sc66.49' => 'cpa', 'Cpa.g.sc80.64' => 'cpa', 'CsaV3_1G012320' => 'csa', 'CsaV3_2G008480' => 'csa', 'CsaV3_2G033450' => 'csa', 'CsaV3_3G044830' => 'csa', 'CsaV3_4G033710' => 'csa', 'CsaV3_6G051730' => 'csa', 'CsaV3_7G025350' => 'csa', 'CSS0001067' => 'camsi', 'CSS0005996' => 'camsi', 'CSS0006590' => 'camsi', 'CSS0009673' => 'camsi', 'CSS0010201' => 'camsi', 'CSS0010549' => 'camsi', 'CSS0011364' => 'camsi', 'CSS0014473' => 'camsi', 'CSS0014961' => 'camsi', 'CSS0020191' => 'camsi', 'CSS0021165' => 'camsi', 'CSS0022306' => 'camsi', 'CSS0030591' => 'camsi', 'CSS0030696' => 'camsi', 'CSS0032653' => 'camsi', 'CSS0037487' => 'camsi', 'CSS0041102' => 'camsi', 'CSS0041261' => 'camsi', 'CSS0046246' => 'camsi', 'CSS0049256' => 'camsi', 'DCAR_004075' => 'dca', 'DCAR_011538' => 'dca', 'DCAR_019553' => 'dca', 'DCAR_020952' => 'dca', 'DCAR_021739' => 'dca', 'DCAR_027407' => 'dca', 'DCAR_027913' => 'dca', 'DCAR_028066' => 'dca', 'Dinv05899' => 'din', 'Dinv07563' => 'din', 'Dinv08010' => 'din', 'Dinv14125' => 'din', 'Dinv20172' => 'din', 'Dinv30743' => 'din', 'Dinv31229' => 'din', 'Dinv34162' => 'din', 'Dinv36028' => 'din', 'Dinv39368' => 'din', 'Dinv40565' => 'din', 'Dinv41706' => 'din', 'Duzib052G0089' => 'dzi', 'Duzib116G0641' => 'dzi', 'Duzib132G0069' => 'dzi', 'Duzib132G1219' => 'dzi', 'Duzib147G0278' => 'dzi', 'Duzib160G0480' => 'dzi', 'Duzib170G0661' => 'dzi', 'Duzib177G0591' => 'dzi', 'Duzib187G1353' => 'dzi', 'Duzib192G0858' => 'dzi', 'Duzib192G0883' => 'dzi', 'Duzib213G0506' => 'dzi', 'Duzib235G0289' => 'dzi', 'Duzib251G0422' => 'dzi', 'ECA232G3898' => 'eca', 'ECA233G5950' => 'eca', 'ECA234G1699' => 'eca', 'ECA234G2421' => 'eca', 'ECA236G0426' => 'eca', 'ECA236G4331' => 'eca', 'ECA248G2573' => 'eca', 'EL10Ac1g00077' => 'bvu', 'EL10Ac1g01746' => 'bvu', 'EL10Ac2g03464' => 'bvu', 'EL10Ac4g08176' => 'bvu', 'EL10Ac7g17521' => 'bvu', 'EL10Ac8g20386' => 'bvu', 'EL10Ac9g21343' => 'bvu', 'EL10Ac9g22688' => 'bvu', 'Eucgr.B03434' => 'egr', 'Eucgr.D00618' => 'egr', 'Eucgr.E02395' => 'egr', 'Eucgr.F01129' => 'egr', 'Eucgr.F02622' => 'egr', 'Eucgr.F04207' => 'egr', 'FAN01G0570' => 'fan', 'FAN03G3351' => 'fan', 'FAN06G3702' => 'fan', 'FAN07G2149' => 'fan', 'FAN10G3758' => 'fan', 'FAN11G1170' => 'fan', 'FAN11G2050' => 'fan', 'FAN11G2724' => 'fan', 'FAN12G1700' => 'fan', 'FAN12G2028' => 'fan', 'FAN15G1160' => 'fan', 'FAN15G3063' => 'fan', 'FAN16G2540' => 'fan', 'FAN16G3077' => 'fan', 'FAN16G3624' => 'fan', 'FAN17G0221' => 'fan', 'FAN20G2492' => 'fan', 'FAN20G2905' => 'fan', 'FAN21G0548' => 'fan', 'FAN21G1300' => 'fan', 'FAN22G0077' => 'fan', 'FAN22G1315' => 'fan', 'FAN24G1280' => 'fan', 'FAN24G1445' => 'fan', 'FAN24G3527' => 'fan', 'FAN25G0464' => 'fan', 'FAN25G2885' => 'fan', 'FAN25G3270' => 'fan', 'FAN27G1101' => 'fan', 'FAN27G2846' => 'fan', 'FAN27G3524' => 'fan', 'FvH4_2g11770' => 'fve', 'FvH4_2g15630' => 'fve', 'FvH4_3g05570' => 'fve', 'FvH4_3g09110' => 'fve', 'FvH4_3g19940' => 'fve', 'FvH4_4g04821' => 'fve', 'FvH4_4g31480' => 'fve', 'FvH4_7g01740' => 'fve', 'Glyma.05G130400' => 'gma', 'Glyma.05G156400' => 'gma', 'Glyma.07G197000' => 'gma', 'Glyma.08G085151' => 'gma', 'Glyma.08G114500' => 'gma', 'Glyma.08G300400' => 'gma', 'Glyma.10G215800' => 'gma', 'Glyma.12G224400' => 'gma', 'Glyma.13G179300' => 'gma', 'Glyma.13G218151' => 'gma', 'Glyma.13G238800' => 'gma', 'Glyma.13G276900' => 'gma', 'Glyma.14G078200' => 'gma', 'Glyma.15G074500' => 'gma', 'Glyma.15G094100' => 'gma', 'Glyma.17G247200' => 'gma', 'Glyma.18G120100' => 'gma', 'Glyma.20G176000' => 'gma', 'Gohir.A01G063600' => 'ghi', 'Gohir.A01G170301' => 'ghi', 'Gohir.A02G060500' => 'ghi', 'Gohir.A05G133850' => 'ghi', 'Gohir.A05G161400' => 'ghi', 'Gohir.A06G012900' => 'ghi', 'Gohir.A06G035901' => 'ghi', 'Gohir.A06G127100' => 'ghi', 'Gohir.A06G210500' => 'ghi', 'Gohir.A08G008650' => 'ghi', 'Gohir.A09G072700' => 'ghi', 'Gohir.A09G088301' => 'ghi', 'Gohir.A10G040600' => 'ghi', 'Gohir.A12G036300' => 'ghi', 'Gohir.A12G143350' => 'ghi', 'Gohir.A12G165500' => 'ghi', 'Gohir.A13G145700' => 'ghi', 'Gohir.D01G050000' => 'ghi', 'Gohir.D01G051366' => 'ghi', 'Gohir.D01G161350' => 'ghi', 'Gohir.D02G065900' => 'ghi', 'Gohir.D05G164200' => 'ghi', 'Gohir.D05G355500' => 'ghi', 'Gohir.D06G010400' => 'ghi', 'Gohir.D06G111250' => 'ghi', 'Gohir.D06G132000' => 'ghi', 'Gohir.D06G210500' => 'ghi', 'Gohir.D07G165675' => 'ghi', 'Gohir.D08G062240' => 'ghi', 'Gohir.D08G086101' => 'ghi', 'Gohir.D08G138060' => 'ghi', 'Gohir.D09G072300' => 'ghi', 'Gohir.D10G041400' => 'ghi', 'Gohir.D11G191020' => 'ghi', 'Gohir.D11G212066' => 'ghi', 'Gohir.D12G036300' => 'ghi', 'Gohir.D12G168600' => 'ghi', 'Gohir.D13G150600' => 'ghi', 'Gorai.001G057300' => 'gra', 'Gorai.002G069900' => 'gra', 'Gorai.002G200000' => 'gra', 'Gorai.003G067600' => 'gra', 'Gorai.005G074800' => 'gra', 'Gorai.006G087300' => 'gra', 'Gorai.008G037500' => 'gra', 'Gorai.008G181400' => 'gra', 'Gorai.009G169400' => 'gra', 'Gorai.009G387900' => 'gra', 'Gorai.010G013300' => 'gra', 'Gorai.010G153800' => 'gra', 'Gorai.010G255800' => 'gra', 'Gorai.011G043700' => 'gra', 'Gorai.011G198900' => 'gra', 'Gorai.013G168400' => 'gra', 'GSVIVG01005212001' => 'vvi', 'GSVIVG01006163001' => 'vvi', 'GSVIVG01009625001' => 'vvi', 'GSVIVG01014338001' => 'vvi', 'GSVIVG01020005001' => 'vvi', 'GSVIVG01021450001' => 'vvi', 'GSVIVG01023975001' => 'vvi', 'GSVIVG01034490001' => 'vvi', 'HanXRQChr04g0112071' => 'han', 'HanXRQChr05g0131151' => 'han', 'HanXRQChr09g0262371' => 'han', 'HanXRQChr09g0268401' => 'han', 'HanXRQChr10g0279241' => 'han', 'HanXRQChr10g0297961' => 'han', 'HanXRQChr11g0326231' => 'han', 'HanXRQChr11g0328471' => 'han', 'HanXRQChr16g0507941' => 'han', 'HanXRQChr17g0560211' => 'han', 'Haze_02108' => 'cav', 'Haze_02428' => 'cav', 'Haze_05593' => 'cav', 'Haze_06448' => 'cav', 'Haze_09427' => 'cav', 'Haze_12022' => 'cav', 'Haze_17612' => 'cav', 'Haze_17928' => 'cav', 'Hma1.2p1_0032F.1_g019250' => 'hma', 'Hma1.2p1_0163F.1_g072690' => 'hma', 'Hma1.2p1_0265F.1_g106710' => 'hma', 'Hma1.2p1_0286F.1_g113970' => 'hma', 'Hma1.2p1_0363F.1_g136640' => 'hma', 'Hma1.2p1_0584F.1_g183470' => 'hma', 'Hma1.2p1_0885F.1_g232570' => 'hma', 'HPP92_006022' => 'vpl', 'HPP92_007320' => 'vpl', 'HPP92_011521' => 'vpl', 'HPP92_019387' => 'vpl', 'HPP92_024038' => 'vpl', 'Hund05891' => 'sun', 'Hund06450' => 'sun', 'Hund12053' => 'sun', 'Hund16800' => 'sun', 'Hund21222' => 'sun', 'Hund22896' => 'sun', 'Hund23746' => 'sun', 'Hund27083' => 'sun', 'Lalb_Chr02g0141831' => 'lal', 'Lalb_Chr02g0141841' => 'lal', 'Lalb_Chr05g0220411' => 'lal', 'Lalb_Chr06g0162081' => 'lal', 'Lalb_Chr09g0327651' => 'lal', 'Lalb_Chr13g0295051' => 'lal', 'Lalb_Chr15g0086801' => 'lal', 'Lalb_Chr16g0383781' => 'lal', 'Lalb_Chr16g0383791' => 'lal', 'Lalb_Chr18g0055441' => 'lal', 'Lalb_Chr18g0059611' => 'lal', 'Lalb_Chr20g0109661' => 'lal', 'Lalb_Chr20g0109831' => 'lal', 'Lalb_Chr20g0121871' => 'lal', 'Lalb_Chr22g0355361' => 'lal', 'Lalb_Chr25g0286371' => 'lal', 'Lj1A1187G43' => 'lonja', 'Lj1A1205T50' => 'lonja', 'Lj1A800G33' => 'lonja', 'Lj1C1187T7' => 'lonja', 'Lj1C843T11' => 'lonja', 'Lj1g0010940' => 'lja', 'Lj2A288T69' => 'lonja', 'Lj3g0024276' => 'lja', 'Lj4A47T76' => 'lonja', 'Lj4g0005805' => 'lja', 'Lj4g0006097' => 'lja', 'Lj4g0008528' => 'lja', 'Lj4g0024907' => 'lja', 'Lj5g0012472' => 'lja', 'Lj5g0018648' => 'lja', 'Lj6C789G1' => 'lonja', 'Lj6g0004000' => 'lja', 'Lj7A292G67' => 'lonja', 'Lj7A292T64' => 'lonja', 'Lj9A400T58' => 'lonja', 'Lsat_1_v5_gn_1_126181' => 'lsa', 'Lsat_1_v5_gn_4_123041' => 'lsa', 'Lsat_1_v5_gn_4_133620' => 'lsa', 'Lsat_1_v5_gn_4_53221' => 'lsa', 'Lsat_1_v5_gn_4_71961' => 'lsa', 'Lsat_1_v5_gn_7_105241' => 'lsa', 'Lsat_1_v5_gn_7_21361' => 'lsa', 'Lsat_1_v5_gn_7_28860' => 'lsa', 'Lsat_1_v5_gn_7_31260' => 'lsa', 'Lsat_1_v5_gn_8_52801' => 'lsa', 'Manes.02G191400' => 'mes', 'Manes.03G110100' => 'mes', 'Manes.04G071100' => 'mes', 'Manes.05G100500' => 'mes', 'Manes.05G164700' => 'mes', 'Manes.15G087000' => 'mes', 'Manes.15G121500' => 'mes', 'Manes.16G028300' => 'mes', 'Manes.17G046100' => 'mes', 'Manes.17G069800' => 'mes', 'Manes.18G100500' => 'mes', 'Mapoly0002s0109' => 'mpo', 'Mapoly0024s0007' => 'mpo', 'Mapoly0089s0032' => 'mpo', 'MBI04_g42241_MAGBIO' => 'mbi', 'MBI05_g11988_MAGBIO' => 'mbi', 'MBI05_g35452_MAGBIO' => 'mbi', 'MBI07_g30179_MAGBIO' => 'mbi', 'MBI07_g35859_MAGBIO' => 'mbi', 'MBI07_g35860_MAGBIO' => 'mbi', 'MBI07_g37166_MAGBIO' => 'mbi', 'MBI08_g18172_MAGBIO' => 'mbi', 'MBI09_g08441_MAGBIO' => 'mbi', 'MBI13_g01676_MAGBIO' => 'mbi', 'MBI14_g42955_MAGBIO' => 'mbi', 'MBI16_g13161_MAGBIO' => 'mbi', 'MBI17_g27204_MAGBIO' => 'mbi', 'MBI19_g21595_MAGBIO' => 'mbi', 'MD00G1148400' => 'mdo', 'MD02G1301200' => 'mdo', 'MD03G1227800' => 'mdo', 'MD05G1041100' => 'mdo', 'MD05G1124800' => 'mdo', 'MD05G1284000' => 'mdo', 'MD05G1338800' => 'mdo', 'MD05G1338900' => 'mdo', 'MD07G1022800' => 'mdo', 'MD10G1047500' => 'mdo', 'MD10G1127500' => 'mdo', 'MD10G1262300' => 'mdo', 'MD10G1293800' => 'mdo', 'MD16G1074300' => 'mdo', 'Medtr1g021670' => 'mtr', 'Medtr1g096320' => 'mtr', 'Medtr2g013690' => 'mtr', 'Medtr2g019450' => 'mtr', 'Medtr2g085170' => 'mtr', 'Medtr4g088785' => 'mtr', 'Medtr8g055930' => 'mtr', 'Medtr8g085850' => 'mtr', 'MELO3C002605.2' => 'cme', 'MELO3C003891.2' => 'cme', 'MELO3C004012.2' => 'cme', 'MELO3C007134.2' => 'cme', 'MELO3C008118.2' => 'cme', 'MELO3C016700.2' => 'cme', 'MELO3C024127.2' => 'cme', 'MELO3C033361.2' => 'cme', 'MELO3C033362.2' => 'cme', 'Migut.C00430' => 'egut', 'Migut.C01246' => 'egut', 'Migut.E00101' => 'egut', 'Migut.H01486' => 'egut', 'Migut.H01939' => 'egut', 'Migut.K00360' => 'egut', 'Migut.M00910' => 'egut', 'Migut.M01139' => 'egut', 'Migut.N02677' => 'egut', 'MSTRG.13252' => 'ama', 'MSTRG.14701' => 'ama', 'MSTRG.1521' => 'ama', 'MSTRG.15884' => 'ama', 'MSTRG.16242' => 'ama', 'MSTRG.22285' => 'ama', 'MSTRG.22444' => 'ama', 'MSTRG.2349' => 'ama', 'MSTRG.26308' => 'ama', 'MSTRG.28296' => 'ama', 'MSTRG.9895' => 'ama', 'Nitab4.5_0000110g0060' => 'nta', 'Nitab4.5_0000420g0130' => 'nta', 'Nitab4.5_0000422g0030' => 'nta', 'Nitab4.5_0000560g0180' => 'nta', 'Nitab4.5_0000703g0100' => 'nta', 'Nitab4.5_0000786g0200' => 'nta', 'Nitab4.5_0001336g0020' => 'nta', 'Nitab4.5_0001796g0030' => 'nta', 'Nitab4.5_0003348g0060' => 'nta', 'Nitab4.5_0003698g0040' => 'nta', 'Nitab4.5_0003942g0090' => 'nta', 'Nitab4.5_0004775g0070' => 'nta', 'Nitab4.5_0004864g0030' => 'nta', 'Nitab4.5_0005615g0020' => 'nta', 'Nitab4.5_0009288g0030' => 'nta', 'Nitab4.5_0009341g0010' => 'nta', 'Nitab4.5_0009535g0010' => 'nta', 'Nn1g03995' => 'nnu', 'Nn1g04100' => 'nnu', 'Nn1g06530' => 'nnu', 'Nn3g16404' => 'nnu', 'Nn3g17212' => 'nnu', 'Nn3g20776' => 'nnu', 'Nn3g21923' => 'nnu', 'Nn5g27737' => 'nnu', 'Nn5g29461' => 'nnu', 'Nn7g38355' => 'nnu', 'Nn8g39873' => 'nnu', 'Oeu000548.2' => 'oeu', 'Oeu004672.1' => 'oeu', 'Oeu015605.2' => 'oeu', 'Oeu016092.1' => 'oeu', 'Oeu017879.3' => 'oeu', 'Oeu024910.1' => 'oeu', 'Oeu028965.1' => 'oeu', 'Oeu031269.1' => 'oeu', 'Oeu031270.1' => 'oeu', 'Oeu032535.1' => 'oeu', 'Oeu034151.1' => 'oeu', 'Oeu034152.1' => 'oeu', 'Oeu034588.2' => 'oeu', 'Oeu050846.1' => 'oeu', 'Oeu050849.2' => 'oeu', 'Oeu051063.2' => 'oeu', 'Oeu052368.1' => 'oeu', 'Oeu052370.1' => 'oeu', 'Os01g0210400' => 'osa', 'Os01g0304300' => 'osa', 'Os01g0749100' => 'osa', 'Os02g0745800' => 'osa', 'Os03g0769050' => 'osa', 'Os05g0531500' => 'osa', 'Os06g0724300' => 'osa', 'Os11g0198100' => 'osa', 'Peaxi162Scf00069g01425' => 'pax', 'Peaxi162Scf00280g00811' => 'pax', 'Peaxi162Scf00310g00615' => 'pax', 'Peaxi162Scf00362g00542' => 'pax', 'Peaxi162Scf00461g00310' => 'pax', 'Peaxi162Scf00530g00118' => 'pax', 'Peaxi162Scf00541g00057' => 'pax', 'Peaxi162Scf00661g00017' => 'pax', 'Peaxi162Scf00926g00027' => 'pax', 'Peaxi162Scf01064g00263' => 'pax', 'Peaxi162Scf01211g00135' => 'pax', 'PGR004G2336' => 'pgr', 'PGR042G0327' => 'pgr', 'PGR042G1957' => 'pgr', 'PGR042G2003' => 'pgr', 'PGR042G3929' => 'pgr', 'PGR083G1137' => 'pgr', 'PGR083G1364' => 'pgr', 'PGSC0003DMG400003381' => 'stu', 'PGSC0003DMG400003417' => 'stu', 'PGSC0003DMG400008981' => 'stu', 'PGSC0003DMG400012417' => 'stu', 'PGSC0003DMG400012823' => 'stu', 'PGSC0003DMG400016885' => 'stu', 'PGSC0003DMG400022812' => 'stu', 'PGSC0003DMG400029726' => 'stu', 'PGSC0003DMG401009243' => 'stu', 'PGSC0003DMG401031505' => 'stu', 'PGSC0003DMG402031505' => 'stu', 'Phvul.001G017600' => 'pvu', 'Phvul.002G193500' => 'pvu', 'Phvul.002G228900' => 'pvu', 'Phvul.002G236800' => 'pvu', 'Phvul.003G049500' => 'pvu', 'Phvul.005G072000' => 'pvu', 'Phvul.006G164800' => 'pvu', 'Phvul.006G185100' => 'pvu', 'Phvul.007G090000' => 'pvu', 'Potri.001G399800' => 'ptr', 'Potri.002G149900' => 'ptr', 'Potri.004G044100' => 'ptr', 'Potri.004G177600' => 'ptr', 'Potri.009G138000' => 'ptr', 'Potri.010G094000' => 'ptr', 'Potri.011G053000' => 'ptr', 'Potri.011G119300' => 'ptr', 'Potri.013G113700' => 'ptr', 'Potri.018G107800' => 'ptr', 'Potri.019G084100' => 'ptr', 'Pp3c14_23720' => 'ppa', 'Pp3c16_6340' => 'ppa', 'Pp3c23_13420' => 'ppa', 'Pp3c24_2740' => 'ppa', 'Pp3c25_860' => 'ppa', 'Pp3c8_21750' => 'ppa', 'Prupe.1G273000' => 'ppe', 'Prupe.1G273700' => 'ppe', 'Prupe.1G274100' => 'ppe', 'Prupe.2G023300' => 'ppe', 'Prupe.4G048000' => 'ppe', 'Prupe.4G080400' => 'ppe', 'Prupe.4G181200' => 'ppe', 'Prupe.8G056900' => 'ppe', 'Prupe.8G168700' => 'ppe', 'Psat1g189080' => 'psa', 'Psat1g204760' => 'psa', 'Psat4g175560' => 'psa', 'Psat4g177720' => 'psa', 'Psat5g244240' => 'psa', 'Psat6g010720' => 'psa', 'Psat6g187200' => 'psa', 'Psat7g072040' => 'psa', 'PSO017G3501' => 'pso', 'PSO063G2148' => 'pso', 'PSO063G5608' => 'pso', 'PSO210G6392' => 'pso', 'PSO541G2319' => 'pso', 'PSO541G2836' => 'pso', 'PSO541G4012' => 'pso', 'PSO541G6253' => 'pso', 'PSO675G0580' => 'pso', 'PSO675G0856' => 'pso', 'PSO675G5635' => 'pso', 'PSO675G9157' => 'pso', 'PSO832G1660' => 'pso', 'PSO832G1969' => 'pso', 'QL02p007186' => 'qlo', 'QL02p033904' => 'qlo', 'QL03p064391' => 'qlo', 'QL05p040593' => 'qlo', 'QL05p058242' => 'qlo', 'QL08p021825' => 'qlo', 'QL11p004981' => 'qlo', 'RcHm_v2.0_Chr1g0318301' => 'rch', 'RcHm_v2.0_Chr4g0418501' => 'rch', 'RcHm_v2.0_Chr4g0439971' => 'rch', 'RcHm_v2.0_Chr5g0008541' => 'rch', 'RcHm_v2.0_Chr5g0014101' => 'rch', 'RcHm_v2.0_Chr5g0014131' => 'rch', 'RcHm_v2.0_Chr5g0033621' => 'rch', 'RcHm_v2.0_Chr6g0272041' => 'rch', 'RcHm_v2.0_Chr6g0278831' => 'rch', 'Rhsim02G0130400' => 'rsi', 'Rhsim02G0171100' => 'rsi', 'Rhsim05G0053000' => 'rsi', 'Rhsim05G0053100' => 'rsi', 'Rhsim06G0096500' => 'rsi', 'Rhsim06G0096600' => 'rsi', 'Rhsim06G0199100' => 'rsi', 'Rhsim12G0062300' => 'rsi', 'Rhsim12G0062800' => 'rsi', 'Sabra02G0118600' => 'sbr', 'Sabra04G0027300' => 'sbr', 'Sabra04G0119500' => 'sbr', 'Sabra08G0112500' => 'sbr', 'Sabra11G0036800' => 'sbr', 'Sabra11G0103800' => 'sbr', 'Sabra13G0096300' => 'sbr', 'Sabra16G0262300' => 'sbr', 'Sabra18G0091700' => 'sbr', 'Sabra19G0095400' => 'sbr', 'SalBow6G3080' => 'sbo', 'SalBow7G1157' => 'sbo', 'SalBow7G2123' => 'sbo', 'SalBow7G2285' => 'sbo', 'SalBow7G3537' => 'sbo', 'SalBow8G2947' => 'sbo', 'SalBow8G4463' => 'sbo', 'SalBow8G5466' => 'sbo', 'Sc01g0001750' => 'sci', 'Sc02g0006640' => 'sci', 'Sc02g0006670' => 'sci', 'Sc04g0008220' => 'sci', 'Sc05g0006190' => 'sci', 'Sc08g0002760' => 'sci', 'Sc17g0006170' => 'sci', 'Sc22g0002050' => 'sci', 'Sc23g0001190' => 'sci', 'Sc24g0000980' => 'sci', 'Sed0006245' => 'sed', 'Sed0007543' => 'sed', 'Sed0009411' => 'sed', 'Sed0010765' => 'sed', 'Sed0012944' => 'sed', 'Sed0014682' => 'sed', 'Sed0016174' => 'sed', 'Sed0016796' => 'sed', 'Sed0020317' => 'sed', 'Sed0021467' => 'sed', 'SEGI_01316' => 'sgi', 'SEGI_03374' => 'sgi', 'SEGI_16265' => 'sgi', 'SEGI_18569' => 'sgi', 'SEGI_20351' => 'sgi', 'SEGI_26395' => 'sgi', 'SEGI_29469' => 'sgi', 'SEGI_34771' => 'sgi', 'SEGI_36769' => 'sgi', 'SEGI_37139' => 'sgi', 'SGA_v2.0_scaffold100G29687' => 'sas', 'SGA_v2.0_scaffold118G32472' => 'sas', 'SGA_v2.0_scaffold14G07051' => 'sas', 'SGA_v2.0_scaffold183G39845' => 'sas', 'SGA_v2.0_scaffold1G00174' => 'sas', 'SGA_v2.0_scaffold22G09714' => 'sas', 'SGA_v2.0_scaffold333G48992' => 'sas', 'SGA_v2.0_scaffold46G17491' => 'sas', 'SGA_v2.0_scaffold49G18294' => 'sas', 'SGA_v2.0_scaffold63G21658' => 'sas', 'SHI01741' => 'shi', 'SHI05771' => 'shi', 'SHI18077' => 'shi', 'SHI20525' => 'shi', 'SHI20527' => 'shi', 'SHI20528' => 'shi', 'SMO172G0185' => 'smo', 'SMO198G0020' => 'smo', 'SMO351G0006' => 'smo', 'SMO356G0118' => 'smo', 'SMO358G0296' => 'smo', 'SMO367G0079' => 'smo', 'SMO367G1277' => 'smo', 'Solyc01g014220.3' => 'sly', 'Solyc01g111770.2' => 'sly', 'Solyc02g078180.3' => 'sly', 'Solyc03g006430.3' => 'sly', 'Solyc03g006456.1' => 'sly', 'Solyc03g079860.2' => 'sly', 'Solyc04g079770.3' => 'sly', 'Solyc05g007430.4' => 'sly', 'Solyc07g063150.3' => 'sly', 'Solyc08g016620.3' => 'sly', 'Solyc09g057590.3' => 'sly', 'Solyc09g057600.1' => 'sly', 'Solyc10g009050.3' => 'sly', 'Solyc11g017420.2' => 'sly', 'Sopen01g053810' => 'spe', 'Sopen02g023040' => 'spe', 'Sopen03g002440' => 'spe', 'Sopen04g033350' => 'spe', 'Sopen05g003310' => 'spe', 'Sopen07g004050' => 'spe', 'Sopen07g031340' => 'spe', 'Sopen08g006990' => 'spe', 'Sopen10g004830' => 'spe', 'Sopen11g009370' => 'spe', 'Sp1g24450' => 'spa', 'Sp1g29670' => 'spa', 'Sp1g39600' => 'spa', 'Sp2g11080' => 'spa', 'Sp2g13970' => 'spa', 'Sp4g16130' => 'spa', 'Sp6g13080' => 'spa', 'Sp7g37270' => 'spa', 'TAR371G0065' => 'tar', 'TAR376G0340' => 'tar', 'TAR376G0435' => 'tar', 'TAR381G0002' => 'tar', 'TAR381G1236' => 'tar', 'TAR624G0055' => 'tar', 'TAR624G0324' => 'tar', 'TAR624G0696' => 'tar', 'TAR624G0906' => 'tar', 'TAR625G0107' => 'tar', 'TAR626G0015' => 'tar', 'TAR626G1356' => 'tar', 'TAR627G0888' => 'tar', 'TAR628G0399' => 'tar', 'TAR628G1327' => 'tar', 'TAR629G2831' => 'tar', 'TAR629G2874' => 'tar', 'TAR633G1432' => 'tar', 'TAR633G2771' => 'tar', 'THA.LOC104803394' => 'tha', 'THA.LOC104805153' => 'tha', 'THA.LOC104806784' => 'tha', 'THA.LOC104810473' => 'tha', 'THA.LOC104813100' => 'tha', 'THA.LOC104814215' => 'tha', 'THA.LOC104815554' => 'tha', 'THA.LOC104820544' => 'tha', 'THA.LOC104824754' => 'tha', 'THA.LOC104827717' => 'tha', 'Thecc.02G031400' => 'tca', 'Thecc.02G055900' => 'tca', 'Thecc.02G350800' => 'tca', 'Thecc.06G150900' => 'tca', 'Thecc.06G186600' => 'tca', 'Thecc.07G089600' => 'tca', 'Thecc.08G020400' => 'tca', 'Thecc.08G182100' => 'tca', 'Thhalv10000873m.g' => 'esa', 'Thhalv10004185m.g' => 'esa', 'Thhalv10006981m.g' => 'esa', 'Thhalv10007204m.g' => 'esa', 'Thhalv10011374m.g' => 'esa', 'Thhalv10013482m.g' => 'esa', 'Thhalv10017801m.g' => 'esa', 'Thhalv10024983m.g' => 'esa', 'TPR.G12072' => 'tpr', 'TPR.G15769' => 'tpr', 'TPR.G16504' => 'tpr', 'TPR.G16506' => 'tpr', 'TPR.G24345' => 'tpr', 'TPR.G26666' => 'tpr', 'TPR.G27320' => 'tpr', 'TPR.G31819' => 'tpr', 'TPR.G38879' => 'tpr', 'TPR.G39015' => 'tpr', 'TPR.G8819' => 'tpr', 'TWI09G0924' => 'twi', 'TWI12G0811' => 'twi', 'TWI12G1294' => 'twi', 'TWI31G0150' => 'twi', 'TWI36G1262' => 'twi', 'TWI38G1287' => 'twi', 'TWI38G1633' => 'twi', 'TWI38G1982' => 'twi', 'TWI39G0116' => 'twi', 'TWI60G1011' => 'twi', 'TWI63G0171' => 'twi', 'TWI73G0839' => 'twi', 'TWI79G1511' => 'twi', 'unitig_0.g915' => 'ugi', 'unitig_0.g916' => 'ugi', 'unitig_21.g20219' => 'ugi', 'unitig_21.g20416' => 'ugi', 'unitig_578.g16132' => 'ugi', 'unitig_578.g16718' => 'ugi', 'unitig_62.g23481' => 'ugi', 'unitig_744.g24535' => 'ugi', 'unitig_749.g13525' => 'ugi', 'vmacro01248' => 'vma', 'vmacro02290' => 'vma', 'vmacro10946' => 'vma', 'vmacro11865' => 'vma', 'vmacro12493' => 'vma', 'vmacro17322' => 'vma', 'vmacro21599' => 'vma', 'vmacro23041' => 'vma', 'VMungo0251G0004' => 'vmu', 'VMungo0251G2639' => 'vmu', 'VMungo0251G2967' => 'vmu', 'VMungo0540G0864' => 'vmu', 'VMungo0540G1569' => 'vmu', 'VMungo0647G0317' => 'vmu', 'VMungo0720G1373' => 'vmu', 'VMungo0720G1508' => 'vmu', 'VMungo1080G0485' => 'vmu', 'VMungo1215G3177' => 'vmu', 'Zm00001eb112600' => 'zma', 'Zm00001eb120220' => 'zma', 'Zm00001eb153240' => 'zma', 'Zm00001eb168880' => 'zma', 'Zm00001eb213920' => 'zma', 'Zm00001eb228280' => 'zma', 'Zm00001eb254580' => 'zma', 'Zm00001eb272180' => 'zma', 'Zm00001eb293190' => 'zma', 'Zm00001eb322930' => 'zma', 'Zm00001eb353360' => 'zma', 'Zm00001eb353390' => 'zma', 'Zm00001eb353430' => 'zma', 'Zm00001eb353440' => 'zma', 'Zm00001eb353780' => 'zma' ), 'gf_id' => 'HOM05D000499', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000499' ), 'data_identifier' => 'HOM05D000499', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000499', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1066', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p29780' => 'bna', 'A02p33180' => 'bna', 'A03p16470' => 'bna', 'A03p66010' => 'bna', 'A04p25970' => 'bna', 'A06p01270' => 'bna', 'A06p46080' => 'bna', 'A07p11400' => 'bna', 'A08p01840' => 'bna', 'A08p08230' => 'bna', 'A08p25740' => 'bna', 'A09p32070' => 'bna', 'A09p37830' => 'bna', 'A09p42840' => 'bna', 'A09p42850' => 'bna', 'Aa31LG10G2060' => 'aar', 'Aa31LG2G7410' => 'aar', 'Aa31LG6G10200' => 'aar', 'Aa31LG6G16680' => 'aar', 'Aa31LG6G8470' => 'aar', 'Aa31LG9G12730' => 'aar', 'Aa31LG9G13680' => 'aar', 'Aa31LG9G14920' => 'aar', 'Aa31LG9G6650' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4977' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5467' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3254' => 'aag', 'Actinidia02578' => 'ach', 'Actinidia07693' => 'ach', 'Actinidia08413' => 'ach', 'Actinidia08414' => 'ach', 'Actinidia15289' => 'ach', 'Actinidia19871' => 'ach', 'Actinidia21475' => 'ach', 'Actinidia22576' => 'ach', 'Actinidia28327' => 'ach', 'Actinidia32491' => 'ach', 'Actinidia39463' => 'ach', 'Actinidia39571' => 'ach', 'Ah.01g013750' => 'amhyb', 'Ah.01g023210' => 'amhyb', 'Ah.04g164850' => 'amhyb', 'Ah.05g178060' => 'amhyb', 'Ah.07g204270' => 'amhyb', 'Ah.07g208480' => 'amhyb', 'Ah.09g237410' => 'amhyb', 'Ah.14g089460' => 'amhyb', 'AL1G41790' => 'aly', 'AL1G49050' => 'aly', 'AL1G53810' => 'aly', 'AL1G61400' => 'aly', 'AL4G18580' => 'aly', 'AL5G12510' => 'aly', 'AL5G12540' => 'aly', 'AL6G43230' => 'aly', 'AL7G10370' => 'aly', 'AL7G19250' => 'aly', 'AL8G12240' => 'aly', 'AL8G18540' => 'aly', 'Aqoxy1G02409' => 'aox', 'Aqoxy2G03993' => 'aox', 'Aqoxy3G03357' => 'aox', 'Aqoxy4G00785' => 'aox', 'Aqoxy5G02598' => 'aox', 'Aqoxy6G00132' => 'aox', 'Aqoxy7G01776' => 'aox', 'Aqoxy7G02316' => 'aox', 'Aqoxy7G03973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.12AFKW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B8730' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27IQR1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3F75VG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3RE0GA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41TCQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.527VTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FIR39' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5W8UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DA38EV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ63HS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H1I32C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HC27T5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4M8AP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7N3CZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9UVDZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LS1NQA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT1D4B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SKC4TM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCFV76' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF9Q1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQWD9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1ZM88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WE07RT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YCK7VH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJE6Q6' => 'arhy', 'AT1G28240' => 'ath', 'AT1G34550' => 'ath', 'AT1G53040' => 'ath', 'AT2G02910' => 'ath', 'AT4G09630' => 'ath', 'AT4G38500' => 'ath', 'AT5G42660' => 'ath', 'AT5G46220' => 'ath', 'ATR0152G026' => 'atr', 'ATR0564G343' => 'atr', 'ATR0706G151' => 'atr', 'ATR0733G207' => 'atr', 'ATR0751G234' => 'atr', 'ATR0807G048' => 'atr', 'ATR1091G084' => 'atr', 'Atru.chr10.1229' => 'acertr', 'Atru.chr10.1230' => 'acertr', 'Atru.chr10.1874' => 'acertr', 'Atru.chr11.1808' => 'acertr', 'Atru.chr13.1795' => 'acertr', 'Atru.chr13.570' => 'acertr', 'Atru.chr2.2608' => 'acertr', 'Atru.chr2.2609' => 'acertr', 'Atru.chr5.3428' => 'acertr', 'Atru.chr8.1171' => 'acertr', 'AUR62004651' => 'cqu', 'AUR62008675' => 'cqu', 'AUR62010014' => 'cqu', 'AUR62013004' => 'cqu', 'AUR62014825' => 'cqu', 'AUR62015015' => 'cqu', 'AUR62015151' => 'cqu', 'AUR62017020' => 'cqu', 'AUR62019422' => 'cqu', 'AUR62023570' => 'cqu', 'AUR62025571' => 'cqu', 'AUR62029098' => 'cqu', 'AUR62033863' => 'cqu', 'AUR62034296' => 'cqu', 'AUR62040075' => 'cqu', 'BcaB02g07334' => 'bca', 'BcaB02g10575' => 'bca', 'BcaB03g12119' => 'bca', 'BcaB03g12120' => 'bca', 'BcaB03g13945' => 'bca', 'BcaB04g17123' => 'bca', 'BcaB04g17867' => 'bca', 'BcaB04g19839' => 'bca', 'BcaB07g30317' => 'bca', 'BcaB07g32432' => 'bca', 'BcaB07g33362' => 'bca', 'BcaB08g36611' => 'bca', 'BcaC01g00028' => 'bca', 'BcaC01g01356' => 'bca', 'BcaC01g02034' => 'bca', 'BcaC01g06051' => 'bca', 'BcaC03g16839' => 'bca', 'BcaC03g17176' => 'bca', 'BcaC05g26829' => 'bca', 'BcaC06g31490' => 'bca', 'BcaC06g35344' => 'bca', 'BcaC06g36570' => 'bca', 'BcaC07g37537' => 'bca', 'BcaC08g43491' => 'bca', 'BcaC08g43773' => 'bca', 'BcaNung00234' => 'bca', 'BcaNung01982' => 'bca', 'BcaNung03707' => 'bca', 'BcaNung06454' => 'bca', 'BolC2t10762H' => 'bol', 'BolC2t11191H' => 'bol', 'BolC3t14322H' => 'bol', 'BolC3t19747H' => 'bol', 'BolC3t21425H' => 'bol', 'BolC4t27800H' => 'bol', 'BolC5t31423H' => 'bol', 'BolC6t35951H' => 'bol', 'BolC6t36282H' => 'bol', 'BolC7t40678H' => 'bol', 'BolC7t40679H' => 'bol', 'BolC7t42222H' => 'bol', 'BolC7t43492H' => 'bol', 'BolC7t46785H' => 'bol', 'BolC8t47853H' => 'bol', 'BolC9t56805H' => 'bol', 'BraA02t08000Z' => 'bra', 'BraA02t08341Z' => 'bra', 'BraA03t10936Z' => 'bra', 'BraA03t15657Z' => 'bra', 'BraA04t18100Z' => 'bra', 'BraA05t20523Z' => 'bra', 'BraA06t23353Z' => 'bra', 'BraA06t27473Z' => 'bra', 'BraA06t27769Z' => 'bra', 'BraA07t28928Z' => 'bra', 'BraA08t32236Z' => 'bra', 'BraA08t32841Z' => 'bra', 'BraA08t34524Z' => 'bra', 'BraA09t38742Z' => 'bra', 'BraA09t39295Z' => 'bra', 'C02p47180' => 'bna', 'C02p50990' => 'bna', 'C03p19360' => 'bna', 'C03p74950' => 'bna', 'C03p91000' => 'bna', 'C04p63260' => 'bna', 'C05p27050' => 'bna', 'C06p08750' => 'bna', 'C06p11490' => 'bna', 'C07p02820' => 'bna', 'C07p17180' => 'bna', 'C07p29440' => 'bna', 'C07p63730' => 'bna', 'C09p39260' => 'bna', 'CAN.G1164.34' => 'can', 'CAN.G1164.39' => 'can', 'CAN.G1530.3' => 'can', 'CAN.G162.61' => 'can', 'CAN.G176.6' => 'can', 'CAN.G289.49' => 'can', 'CAN.G370.21' => 'can', 'CAN.G370.22' => 'can', 'CAN.G371.117' => 'can', 'CAN.G58.37' => 'can', 'CAN.G588.98' => 'can', 'CANSAT21G2266' => 'cansat', 'CANSAT25G2799' => 'cansat', 'CANSAT35G0862' => 'cansat', 'CANSAT35G1704' => 'cansat', 'CANSAT35G1760' => 'cansat', 'CANSAT56G3971' => 'cansat', 'CANSAT56G4116' => 'cansat', 'CANSAT80G1259' => 'cansat', 'CARHR027730' => 'chi', 'CARHR033880' => 'chi', 'CARHR043270' => 'chi', 'CARHR145330' => 'chi', 'CARHR145340' => 'chi', 'CARHR175570' => 'chi', 'CARHR181570' => 'chi', 'CARHR258470' => 'chi', 'CARHR260490' => 'chi', 'CARHR294220' => 'chi', 'Carub.0001s2668' => 'cru', 'Carub.0001s3257' => 'cru', 'Carub.0001s4220' => 'cru', 'Carub.0005s0179' => 'cru', 'Carub.0006s2807' => 'cru', 'Carub.0007s0039' => 'cru', 'Carub.0008s0169' => 'cru', 'Carub.0008s0636' => 'cru', 'Ca_00338_v3' => 'car', 'Ca_00542_v3' => 'car', 'Ca_01844_v3' => 'car', 'Ca_10611_v3' => 'car', 'Ca_13326_v3' => 'car', 'Ca_17944_v3' => 'car', 'Ca_18546_v3' => 'car', 'Ca_24219_v3' => 'car', 'Ca_29972_v3' => 'car', 'CBR_g3681' => 'cbr', 'CBR_g40021' => 'cbr', 'Cc01_g08140' => 'ccan', 'Cc02_g13410' => 'ccan', 'Cc02_g37480' => 'ccan', 'Cc05_g12030' => 'ccan', 'Cc09_g03370' => 'ccan', 'Cc09_g10300' => 'ccan', 'Cc10_g03530' => 'ccan', 'Cc10_g11380' => 'ccan', 'CDE01G0176' => 'cde', 'CDE02G0675' => 'cde', 'CDE02G0942' => 'cde', 'CDE02G1153' => 'cde', 'CDE02G4177' => 'cde', 'CDE04G2117' => 'cde', 'CDE04G2736' => 'cde', 'CDE08G1161' => 'cde', 'CDE09G1238' => 'cde', 'Cfa000467' => 'cfa', 'Cfa000947' => 'cfa', 'Cfa004969' => 'cfa', 'Cfa005284' => 'cfa', 'Cfa008993' => 'cfa', 'Cfa018187' => 'cfa', 'Cfa018454' => 'cfa', 'Cfa020585' => 'cfa', 'Ciclev10000424m.g' => 'ccl', 'Ciclev10003605m.g' => 'ccl', 'Ciclev10007828m.g' => 'ccl', 'Ciclev10014620m.g' => 'ccl', 'Ciclev10015169m.g' => 'ccl', 'Ciclev10018291m.g' => 'ccl', 'Ciclev10028256m.g' => 'ccl', 'Ciclev10033822m.g' => 'ccl', 'CiPaw.05G060300' => 'cil', 'CiPaw.05G085000' => 'cil', 'CiPaw.06G083700' => 'cil', 'CiPaw.06G120300' => 'cil', 'CiPaw.09G060500' => 'cil', 'CiPaw.09G123800' => 'cil', 'CiPaw.11G169700' => 'cil', 'CiPaw.12G118300' => 'cil', 'CiPaw.15G071000' => 'cil', 'CiPaw.15G081900' => 'cil', 'ClCG01G024610' => 'cla', 'ClCG03G006070' => 'cla', 'ClCG05G019250' => 'cla', 'ClCG09G009500' => 'cla', 'ClCG11G008200' => 'cla', 'ClCG11G018080' => 'cla', 'COL.COLO4_17373' => 'col', 'COL.COLO4_22994' => 'col', 'COL.COLO4_26389' => 'col', 'COL.COLO4_27170' => 'col', 'COL.COLO4_31074' => 'col', 'COL.COLO4_31465' => 'col', 'COL.COLO4_36438' => 'col', 'COL.COLO4_36439' => 'col', 'Cpa.g.c38781' => 'cpa', 'Cpa.g.sc128.12' => 'cpa', 'Cpa.g.sc166.7' => 'cpa', 'Cpa.g.sc166.8' => 'cpa', 'Cpa.g.sc20.111' => 'cpa', 'Cpa.g.sc27.31' => 'cpa', 'Cpa.g.sc64.36' => 'cpa', 'Cpa.g.sc64.37' => 'cpa', 'Cpa.g.sc66.49' => 'cpa', 'Cpa.g.sc80.64' => 'cpa', 'CsaV3_1G012320' => 'csa', 'CsaV3_2G008480' => 'csa', 'CsaV3_2G033450' => 'csa', 'CsaV3_3G044830' => 'csa', 'CsaV3_4G033710' => 'csa', 'CsaV3_6G051730' => 'csa', 'CsaV3_7G025350' => 'csa', 'CSS0001067' => 'camsi', 'CSS0005996' => 'camsi', 'CSS0006590' => 'camsi', 'CSS0009673' => 'camsi', 'CSS0010201' => 'camsi', 'CSS0010549' => 'camsi', 'CSS0011364' => 'camsi', 'CSS0014473' => 'camsi', 'CSS0014961' => 'camsi', 'CSS0020191' => 'camsi', 'CSS0021165' => 'camsi', 'CSS0022306' => 'camsi', 'CSS0030591' => 'camsi', 'CSS0030696' => 'camsi', 'CSS0032653' => 'camsi', 'CSS0037487' => 'camsi', 'CSS0041102' => 'camsi', 'CSS0041261' => 'camsi', 'CSS0046246' => 'camsi', 'CSS0049256' => 'camsi', 'DCAR_004075' => 'dca', 'DCAR_011538' => 'dca', 'DCAR_019553' => 'dca', 'DCAR_020952' => 'dca', 'DCAR_021739' => 'dca', 'DCAR_027407' => 'dca', 'DCAR_027913' => 'dca', 'DCAR_028066' => 'dca', 'Dinv05899' => 'din', 'Dinv07563' => 'din', 'Dinv08010' => 'din', 'Dinv14125' => 'din', 'Dinv20172' => 'din', 'Dinv30743' => 'din', 'Dinv31229' => 'din', 'Dinv34162' => 'din', 'Dinv36028' => 'din', 'Dinv39368' => 'din', 'Dinv40565' => 'din', 'Dinv41706' => 'din', 'Duzib052G0089' => 'dzi', 'Duzib116G0641' => 'dzi', 'Duzib132G0069' => 'dzi', 'Duzib132G1219' => 'dzi', 'Duzib147G0278' => 'dzi', 'Duzib160G0480' => 'dzi', 'Duzib170G0661' => 'dzi', 'Duzib177G0591' => 'dzi', 'Duzib187G1353' => 'dzi', 'Duzib192G0858' => 'dzi', 'Duzib192G0883' => 'dzi', 'Duzib213G0506' => 'dzi', 'Duzib235G0289' => 'dzi', 'Duzib251G0422' => 'dzi', 'ECA232G3898' => 'eca', 'ECA233G5950' => 'eca', 'ECA234G1699' => 'eca', 'ECA234G2421' => 'eca', 'ECA236G0426' => 'eca', 'ECA236G4331' => 'eca', 'ECA248G2573' => 'eca', 'EL10Ac1g00077' => 'bvu', 'EL10Ac1g01746' => 'bvu', 'EL10Ac2g03464' => 'bvu', 'EL10Ac4g08176' => 'bvu', 'EL10Ac7g17521' => 'bvu', 'EL10Ac8g20386' => 'bvu', 'EL10Ac9g21343' => 'bvu', 'EL10Ac9g22688' => 'bvu', 'Eucgr.B03434' => 'egr', 'Eucgr.D00618' => 'egr', 'Eucgr.E02395' => 'egr', 'Eucgr.F01129' => 'egr', 'Eucgr.F02622' => 'egr', 'Eucgr.F04207' => 'egr', 'FAN01G0570' => 'fan', 'FAN03G3351' => 'fan', 'FAN06G3702' => 'fan', 'FAN07G2149' => 'fan', 'FAN10G3758' => 'fan', 'FAN11G1170' => 'fan', 'FAN11G2050' => 'fan', 'FAN11G2724' => 'fan', 'FAN12G1700' => 'fan', 'FAN12G2028' => 'fan', 'FAN15G1160' => 'fan', 'FAN15G3063' => 'fan', 'FAN16G2540' => 'fan', 'FAN16G3077' => 'fan', 'FAN16G3624' => 'fan', 'FAN17G0221' => 'fan', 'FAN20G2492' => 'fan', 'FAN20G2905' => 'fan', 'FAN21G0548' => 'fan', 'FAN21G1300' => 'fan', 'FAN22G0077' => 'fan', 'FAN22G1315' => 'fan', 'FAN24G1280' => 'fan', 'FAN24G1445' => 'fan', 'FAN24G3527' => 'fan', 'FAN25G0464' => 'fan', 'FAN25G2885' => 'fan', 'FAN25G3270' => 'fan', 'FAN27G1101' => 'fan', 'FAN27G2846' => 'fan', 'FAN27G3524' => 'fan', 'FvH4_2g11770' => 'fve', 'FvH4_2g15630' => 'fve', 'FvH4_3g05570' => 'fve', 'FvH4_3g09110' => 'fve', 'FvH4_3g19940' => 'fve', 'FvH4_4g04821' => 'fve', 'FvH4_4g31480' => 'fve', 'FvH4_7g01740' => 'fve', 'Glyma.05G130400' => 'gma', 'Glyma.05G156400' => 'gma', 'Glyma.07G197000' => 'gma', 'Glyma.08G085151' => 'gma', 'Glyma.08G114500' => 'gma', 'Glyma.08G300400' => 'gma', 'Glyma.10G215800' => 'gma', 'Glyma.12G224400' => 'gma', 'Glyma.13G179300' => 'gma', 'Glyma.13G218151' => 'gma', 'Glyma.13G238800' => 'gma', 'Glyma.13G276900' => 'gma', 'Glyma.14G078200' => 'gma', 'Glyma.15G074500' => 'gma', 'Glyma.15G094100' => 'gma', 'Glyma.17G247200' => 'gma', 'Glyma.18G120100' => 'gma', 'Glyma.20G176000' => 'gma', 'Gohir.A01G063600' => 'ghi', 'Gohir.A01G170301' => 'ghi', 'Gohir.A02G060500' => 'ghi', 'Gohir.A05G133850' => 'ghi', 'Gohir.A05G161400' => 'ghi', 'Gohir.A06G012900' => 'ghi', 'Gohir.A06G035901' => 'ghi', 'Gohir.A06G127100' => 'ghi', 'Gohir.A06G210500' => 'ghi', 'Gohir.A08G008650' => 'ghi', 'Gohir.A09G072700' => 'ghi', 'Gohir.A09G088301' => 'ghi', 'Gohir.A10G040600' => 'ghi', 'Gohir.A12G036300' => 'ghi', 'Gohir.A12G143350' => 'ghi', 'Gohir.A12G165500' => 'ghi', 'Gohir.A13G145700' => 'ghi', 'Gohir.D01G050000' => 'ghi', 'Gohir.D01G051366' => 'ghi', 'Gohir.D01G161350' => 'ghi', 'Gohir.D02G065900' => 'ghi', 'Gohir.D05G164200' => 'ghi', 'Gohir.D05G355500' => 'ghi', 'Gohir.D06G010400' => 'ghi', 'Gohir.D06G111250' => 'ghi', 'Gohir.D06G132000' => 'ghi', 'Gohir.D06G210500' => 'ghi', 'Gohir.D07G165675' => 'ghi', 'Gohir.D08G062240' => 'ghi', 'Gohir.D08G086101' => 'ghi', 'Gohir.D08G138060' => 'ghi', 'Gohir.D09G072300' => 'ghi', 'Gohir.D10G041400' => 'ghi', 'Gohir.D11G191020' => 'ghi', 'Gohir.D11G212066' => 'ghi', 'Gohir.D12G036300' => 'ghi', 'Gohir.D12G168600' => 'ghi', 'Gohir.D13G150600' => 'ghi', 'Gorai.001G057300' => 'gra', 'Gorai.002G069900' => 'gra', 'Gorai.002G200000' => 'gra', 'Gorai.003G067600' => 'gra', 'Gorai.005G074800' => 'gra', 'Gorai.006G087300' => 'gra', 'Gorai.008G037500' => 'gra', 'Gorai.008G181400' => 'gra', 'Gorai.009G169400' => 'gra', 'Gorai.009G387900' => 'gra', 'Gorai.010G013300' => 'gra', 'Gorai.010G153800' => 'gra', 'Gorai.010G255800' => 'gra', 'Gorai.011G043700' => 'gra', 'Gorai.011G198900' => 'gra', 'Gorai.013G168400' => 'gra', 'GSVIVG01005212001' => 'vvi', 'GSVIVG01006163001' => 'vvi', 'GSVIVG01009625001' => 'vvi', 'GSVIVG01014338001' => 'vvi', 'GSVIVG01020005001' => 'vvi', 'GSVIVG01021450001' => 'vvi', 'GSVIVG01023975001' => 'vvi', 'GSVIVG01034490001' => 'vvi', 'HanXRQChr04g0112071' => 'han', 'HanXRQChr05g0131151' => 'han', 'HanXRQChr09g0262371' => 'han', 'HanXRQChr09g0268401' => 'han', 'HanXRQChr10g0279241' => 'han', 'HanXRQChr10g0297961' => 'han', 'HanXRQChr11g0326231' => 'han', 'HanXRQChr11g0328471' => 'han', 'HanXRQChr16g0507941' => 'han', 'HanXRQChr17g0560211' => 'han', 'Haze_02108' => 'cav', 'Haze_02428' => 'cav', 'Haze_05593' => 'cav', 'Haze_06448' => 'cav', 'Haze_09427' => 'cav', 'Haze_12022' => 'cav', 'Haze_17612' => 'cav', 'Haze_17928' => 'cav', 'Hma1.2p1_0032F.1_g019250' => 'hma', 'Hma1.2p1_0163F.1_g072690' => 'hma', 'Hma1.2p1_0265F.1_g106710' => 'hma', 'Hma1.2p1_0286F.1_g113970' => 'hma', 'Hma1.2p1_0363F.1_g136640' => 'hma', 'Hma1.2p1_0584F.1_g183470' => 'hma', 'Hma1.2p1_0885F.1_g232570' => 'hma', 'HPP92_006022' => 'vpl', 'HPP92_007320' => 'vpl', 'HPP92_011521' => 'vpl', 'HPP92_019387' => 'vpl', 'HPP92_024038' => 'vpl', 'Hund05891' => 'sun', 'Hund06450' => 'sun', 'Hund12053' => 'sun', 'Hund16800' => 'sun', 'Hund21222' => 'sun', 'Hund22896' => 'sun', 'Hund23746' => 'sun', 'Hund27083' => 'sun', 'Lalb_Chr02g0141831' => 'lal', 'Lalb_Chr02g0141841' => 'lal', 'Lalb_Chr05g0220411' => 'lal', 'Lalb_Chr06g0162081' => 'lal', 'Lalb_Chr09g0327651' => 'lal', 'Lalb_Chr13g0295051' => 'lal', 'Lalb_Chr15g0086801' => 'lal', 'Lalb_Chr16g0383781' => 'lal', 'Lalb_Chr16g0383791' => 'lal', 'Lalb_Chr18g0055441' => 'lal', 'Lalb_Chr18g0059611' => 'lal', 'Lalb_Chr20g0109661' => 'lal', 'Lalb_Chr20g0109831' => 'lal', 'Lalb_Chr20g0121871' => 'lal', 'Lalb_Chr22g0355361' => 'lal', 'Lalb_Chr25g0286371' => 'lal', 'Lj1A1187G43' => 'lonja', 'Lj1A1205T50' => 'lonja', 'Lj1A800G33' => 'lonja', 'Lj1C1187T7' => 'lonja', 'Lj1C843T11' => 'lonja', 'Lj1g0010940' => 'lja', 'Lj2A288T69' => 'lonja', 'Lj3g0024276' => 'lja', 'Lj4A47T76' => 'lonja', 'Lj4g0005805' => 'lja', 'Lj4g0006097' => 'lja', 'Lj4g0008528' => 'lja', 'Lj4g0024907' => 'lja', 'Lj5g0012472' => 'lja', 'Lj5g0018648' => 'lja', 'Lj6C789G1' => 'lonja', 'Lj6g0004000' => 'lja', 'Lj7A292G67' => 'lonja', 'Lj7A292T64' => 'lonja', 'Lj9A400T58' => 'lonja', 'Lsat_1_v5_gn_1_126181' => 'lsa', 'Lsat_1_v5_gn_4_123041' => 'lsa', 'Lsat_1_v5_gn_4_133620' => 'lsa', 'Lsat_1_v5_gn_4_53221' => 'lsa', 'Lsat_1_v5_gn_4_71961' => 'lsa', 'Lsat_1_v5_gn_7_105241' => 'lsa', 'Lsat_1_v5_gn_7_21361' => 'lsa', 'Lsat_1_v5_gn_7_28860' => 'lsa', 'Lsat_1_v5_gn_7_31260' => 'lsa', 'Lsat_1_v5_gn_8_52801' => 'lsa', 'Manes.02G191400' => 'mes', 'Manes.03G110100' => 'mes', 'Manes.04G071100' => 'mes', 'Manes.05G100500' => 'mes', 'Manes.05G164700' => 'mes', 'Manes.15G087000' => 'mes', 'Manes.15G121500' => 'mes', 'Manes.16G028300' => 'mes', 'Manes.17G046100' => 'mes', 'Manes.17G069800' => 'mes', 'Manes.18G100500' => 'mes', 'Mapoly0002s0109' => 'mpo', 'Mapoly0024s0007' => 'mpo', 'Mapoly0089s0032' => 'mpo', 'MBI04_g42241_MAGBIO' => 'mbi', 'MBI05_g11988_MAGBIO' => 'mbi', 'MBI05_g35452_MAGBIO' => 'mbi', 'MBI07_g30179_MAGBIO' => 'mbi', 'MBI07_g35859_MAGBIO' => 'mbi', 'MBI07_g35860_MAGBIO' => 'mbi', 'MBI07_g37166_MAGBIO' => 'mbi', 'MBI08_g18172_MAGBIO' => 'mbi', 'MBI09_g08441_MAGBIO' => 'mbi', 'MBI13_g01676_MAGBIO' => 'mbi', 'MBI14_g42955_MAGBIO' => 'mbi', 'MBI16_g13161_MAGBIO' => 'mbi', 'MBI17_g27204_MAGBIO' => 'mbi', 'MBI19_g21595_MAGBIO' => 'mbi', 'MD00G1148400' => 'mdo', 'MD02G1301200' => 'mdo', 'MD03G1227800' => 'mdo', 'MD05G1041100' => 'mdo', 'MD05G1124800' => 'mdo', 'MD05G1284000' => 'mdo', 'MD05G1338800' => 'mdo', 'MD05G1338900' => 'mdo', 'MD07G1022800' => 'mdo', 'MD10G1047500' => 'mdo', 'MD10G1127500' => 'mdo', 'MD10G1262300' => 'mdo', 'MD10G1293800' => 'mdo', 'MD16G1074300' => 'mdo', 'Medtr1g021670' => 'mtr', 'Medtr1g096320' => 'mtr', 'Medtr2g013690' => 'mtr', 'Medtr2g019450' => 'mtr', 'Medtr2g085170' => 'mtr', 'Medtr4g088785' => 'mtr', 'Medtr8g055930' => 'mtr', 'Medtr8g085850' => 'mtr', 'MELO3C002605.2' => 'cme', 'MELO3C003891.2' => 'cme', 'MELO3C004012.2' => 'cme', 'MELO3C007134.2' => 'cme', 'MELO3C008118.2' => 'cme', 'MELO3C016700.2' => 'cme', 'MELO3C024127.2' => 'cme', 'MELO3C033361.2' => 'cme', 'MELO3C033362.2' => 'cme', 'Migut.C00430' => 'egut', 'Migut.C01246' => 'egut', 'Migut.E00101' => 'egut', 'Migut.H01486' => 'egut', 'Migut.H01939' => 'egut', 'Migut.K00360' => 'egut', 'Migut.M00910' => 'egut', 'Migut.M01139' => 'egut', 'Migut.N02677' => 'egut', 'MSTRG.13252' => 'ama', 'MSTRG.14701' => 'ama', 'MSTRG.1521' => 'ama', 'MSTRG.15884' => 'ama', 'MSTRG.16242' => 'ama', 'MSTRG.22285' => 'ama', 'MSTRG.22444' => 'ama', 'MSTRG.2349' => 'ama', 'MSTRG.26308' => 'ama', 'MSTRG.28296' => 'ama', 'MSTRG.9895' => 'ama', 'Nitab4.5_0000110g0060' => 'nta', 'Nitab4.5_0000420g0130' => 'nta', 'Nitab4.5_0000422g0030' => 'nta', 'Nitab4.5_0000560g0180' => 'nta', 'Nitab4.5_0000703g0100' => 'nta', 'Nitab4.5_0000786g0200' => 'nta', 'Nitab4.5_0001336g0020' => 'nta', 'Nitab4.5_0001796g0030' => 'nta', 'Nitab4.5_0003348g0060' => 'nta', 'Nitab4.5_0003698g0040' => 'nta', 'Nitab4.5_0003942g0090' => 'nta', 'Nitab4.5_0004775g0070' => 'nta', 'Nitab4.5_0004864g0030' => 'nta', 'Nitab4.5_0005615g0020' => 'nta', 'Nitab4.5_0009288g0030' => 'nta', 'Nitab4.5_0009341g0010' => 'nta', 'Nitab4.5_0009535g0010' => 'nta', 'Nn1g03995' => 'nnu', 'Nn1g04100' => 'nnu', 'Nn1g06530' => 'nnu', 'Nn3g16404' => 'nnu', 'Nn3g17212' => 'nnu', 'Nn3g20776' => 'nnu', 'Nn3g21923' => 'nnu', 'Nn5g27737' => 'nnu', 'Nn5g29461' => 'nnu', 'Nn7g38355' => 'nnu', 'Nn8g39873' => 'nnu', 'Oeu000548.2' => 'oeu', 'Oeu004672.1' => 'oeu', 'Oeu015605.2' => 'oeu', 'Oeu016092.1' => 'oeu', 'Oeu017879.3' => 'oeu', 'Oeu024910.1' => 'oeu', 'Oeu028965.1' => 'oeu', 'Oeu031269.1' => 'oeu', 'Oeu031270.1' => 'oeu', 'Oeu032535.1' => 'oeu', 'Oeu034151.1' => 'oeu', 'Oeu034152.1' => 'oeu', 'Oeu034588.2' => 'oeu', 'Oeu050846.1' => 'oeu', 'Oeu050849.2' => 'oeu', 'Oeu051063.2' => 'oeu', 'Oeu052368.1' => 'oeu', 'Oeu052370.1' => 'oeu', 'Os01g0210400' => 'osa', 'Os01g0304300' => 'osa', 'Os01g0749100' => 'osa', 'Os02g0745800' => 'osa', 'Os03g0769050' => 'osa', 'Os05g0531500' => 'osa', 'Os06g0724300' => 'osa', 'Os11g0198100' => 'osa', 'Peaxi162Scf00069g01425' => 'pax', 'Peaxi162Scf00280g00811' => 'pax', 'Peaxi162Scf00310g00615' => 'pax', 'Peaxi162Scf00362g00542' => 'pax', 'Peaxi162Scf00461g00310' => 'pax', 'Peaxi162Scf00530g00118' => 'pax', 'Peaxi162Scf00541g00057' => 'pax', 'Peaxi162Scf00661g00017' => 'pax', 'Peaxi162Scf00926g00027' => 'pax', 'Peaxi162Scf01064g00263' => 'pax', 'Peaxi162Scf01211g00135' => 'pax', 'PGR004G2336' => 'pgr', 'PGR042G0327' => 'pgr', 'PGR042G1957' => 'pgr', 'PGR042G2003' => 'pgr', 'PGR042G3929' => 'pgr', 'PGR083G1137' => 'pgr', 'PGR083G1364' => 'pgr', 'PGSC0003DMG400003381' => 'stu', 'PGSC0003DMG400003417' => 'stu', 'PGSC0003DMG400008981' => 'stu', 'PGSC0003DMG400012417' => 'stu', 'PGSC0003DMG400012823' => 'stu', 'PGSC0003DMG400016885' => 'stu', 'PGSC0003DMG400022812' => 'stu', 'PGSC0003DMG400029726' => 'stu', 'PGSC0003DMG401009243' => 'stu', 'PGSC0003DMG401031505' => 'stu', 'PGSC0003DMG402031505' => 'stu', 'Phvul.001G017600' => 'pvu', 'Phvul.002G193500' => 'pvu', 'Phvul.002G228900' => 'pvu', 'Phvul.002G236800' => 'pvu', 'Phvul.003G049500' => 'pvu', 'Phvul.005G072000' => 'pvu', 'Phvul.006G164800' => 'pvu', 'Phvul.006G185100' => 'pvu', 'Phvul.007G090000' => 'pvu', 'Potri.001G399800' => 'ptr', 'Potri.002G149900' => 'ptr', 'Potri.004G044100' => 'ptr', 'Potri.004G177600' => 'ptr', 'Potri.009G138000' => 'ptr', 'Potri.010G094000' => 'ptr', 'Potri.011G053000' => 'ptr', 'Potri.011G119300' => 'ptr', 'Potri.013G113700' => 'ptr', 'Potri.018G107800' => 'ptr', 'Potri.019G084100' => 'ptr', 'Pp3c14_23720' => 'ppa', 'Pp3c16_6340' => 'ppa', 'Pp3c23_13420' => 'ppa', 'Pp3c24_2740' => 'ppa', 'Pp3c25_860' => 'ppa', 'Pp3c8_21750' => 'ppa', 'Prupe.1G273000' => 'ppe', 'Prupe.1G273700' => 'ppe', 'Prupe.1G274100' => 'ppe', 'Prupe.2G023300' => 'ppe', 'Prupe.4G048000' => 'ppe', 'Prupe.4G080400' => 'ppe', 'Prupe.4G181200' => 'ppe', 'Prupe.8G056900' => 'ppe', 'Prupe.8G168700' => 'ppe', 'Psat1g189080' => 'psa', 'Psat1g204760' => 'psa', 'Psat4g175560' => 'psa', 'Psat4g177720' => 'psa', 'Psat5g244240' => 'psa', 'Psat6g010720' => 'psa', 'Psat6g187200' => 'psa', 'Psat7g072040' => 'psa', 'PSO017G3501' => 'pso', 'PSO063G2148' => 'pso', 'PSO063G5608' => 'pso', 'PSO210G6392' => 'pso', 'PSO541G2319' => 'pso', 'PSO541G2836' => 'pso', 'PSO541G4012' => 'pso', 'PSO541G6253' => 'pso', 'PSO675G0580' => 'pso', 'PSO675G0856' => 'pso', 'PSO675G5635' => 'pso', 'PSO675G9157' => 'pso', 'PSO832G1660' => 'pso', 'PSO832G1969' => 'pso', 'QL02p007186' => 'qlo', 'QL02p033904' => 'qlo', 'QL03p064391' => 'qlo', 'QL05p040593' => 'qlo', 'QL05p058242' => 'qlo', 'QL08p021825' => 'qlo', 'QL11p004981' => 'qlo', 'RcHm_v2.0_Chr1g0318301' => 'rch', 'RcHm_v2.0_Chr4g0418501' => 'rch', 'RcHm_v2.0_Chr4g0439971' => 'rch', 'RcHm_v2.0_Chr5g0008541' => 'rch', 'RcHm_v2.0_Chr5g0014101' => 'rch', 'RcHm_v2.0_Chr5g0014131' => 'rch', 'RcHm_v2.0_Chr5g0033621' => 'rch', 'RcHm_v2.0_Chr6g0272041' => 'rch', 'RcHm_v2.0_Chr6g0278831' => 'rch', 'Rhsim02G0130400' => 'rsi', 'Rhsim02G0171100' => 'rsi', 'Rhsim05G0053000' => 'rsi', 'Rhsim05G0053100' => 'rsi', 'Rhsim06G0096500' => 'rsi', 'Rhsim06G0096600' => 'rsi', 'Rhsim06G0199100' => 'rsi', 'Rhsim12G0062300' => 'rsi', 'Rhsim12G0062800' => 'rsi', 'Sabra02G0118600' => 'sbr', 'Sabra04G0027300' => 'sbr', 'Sabra04G0119500' => 'sbr', 'Sabra08G0112500' => 'sbr', 'Sabra11G0036800' => 'sbr', 'Sabra11G0103800' => 'sbr', 'Sabra13G0096300' => 'sbr', 'Sabra16G0262300' => 'sbr', 'Sabra18G0091700' => 'sbr', 'Sabra19G0095400' => 'sbr', 'SalBow6G3080' => 'sbo', 'SalBow7G1157' => 'sbo', 'SalBow7G2123' => 'sbo', 'SalBow7G2285' => 'sbo', 'SalBow7G3537' => 'sbo', 'SalBow8G2947' => 'sbo', 'SalBow8G4463' => 'sbo', 'SalBow8G5466' => 'sbo', 'Sc01g0001750' => 'sci', 'Sc02g0006640' => 'sci', 'Sc02g0006670' => 'sci', 'Sc04g0008220' => 'sci', 'Sc05g0006190' => 'sci', 'Sc08g0002760' => 'sci', 'Sc17g0006170' => 'sci', 'Sc22g0002050' => 'sci', 'Sc23g0001190' => 'sci', 'Sc24g0000980' => 'sci', 'Sed0006245' => 'sed', 'Sed0007543' => 'sed', 'Sed0009411' => 'sed', 'Sed0010765' => 'sed', 'Sed0012944' => 'sed', 'Sed0014682' => 'sed', 'Sed0016174' => 'sed', 'Sed0016796' => 'sed', 'Sed0020317' => 'sed', 'Sed0021467' => 'sed', 'SEGI_01316' => 'sgi', 'SEGI_03374' => 'sgi', 'SEGI_16265' => 'sgi', 'SEGI_18569' => 'sgi', 'SEGI_20351' => 'sgi', 'SEGI_26395' => 'sgi', 'SEGI_29469' => 'sgi', 'SEGI_34771' => 'sgi', 'SEGI_36769' => 'sgi', 'SEGI_37139' => 'sgi', 'SGA_v2.0_scaffold100G29687' => 'sas', 'SGA_v2.0_scaffold118G32472' => 'sas', 'SGA_v2.0_scaffold14G07051' => 'sas', 'SGA_v2.0_scaffold183G39845' => 'sas', 'SGA_v2.0_scaffold1G00174' => 'sas', 'SGA_v2.0_scaffold22G09714' => 'sas', 'SGA_v2.0_scaffold333G48992' => 'sas', 'SGA_v2.0_scaffold46G17491' => 'sas', 'SGA_v2.0_scaffold49G18294' => 'sas', 'SGA_v2.0_scaffold63G21658' => 'sas', 'SHI01741' => 'shi', 'SHI05771' => 'shi', 'SHI18077' => 'shi', 'SHI20525' => 'shi', 'SHI20527' => 'shi', 'SHI20528' => 'shi', 'SMO172G0185' => 'smo', 'SMO198G0020' => 'smo', 'SMO351G0006' => 'smo', 'SMO356G0118' => 'smo', 'SMO358G0296' => 'smo', 'SMO367G0079' => 'smo', 'SMO367G1277' => 'smo', 'Solyc01g014220.3' => 'sly', 'Solyc01g111770.2' => 'sly', 'Solyc02g078180.3' => 'sly', 'Solyc03g006430.3' => 'sly', 'Solyc03g006456.1' => 'sly', 'Solyc03g079860.2' => 'sly', 'Solyc04g079770.3' => 'sly', 'Solyc05g007430.4' => 'sly', 'Solyc07g063150.3' => 'sly', 'Solyc08g016620.3' => 'sly', 'Solyc09g057590.3' => 'sly', 'Solyc09g057600.1' => 'sly', 'Solyc10g009050.3' => 'sly', 'Solyc11g017420.2' => 'sly', 'Sopen01g053810' => 'spe', 'Sopen02g023040' => 'spe', 'Sopen03g002440' => 'spe', 'Sopen04g033350' => 'spe', 'Sopen05g003310' => 'spe', 'Sopen07g004050' => 'spe', 'Sopen07g031340' => 'spe', 'Sopen08g006990' => 'spe', 'Sopen10g004830' => 'spe', 'Sopen11g009370' => 'spe', 'Sp1g24450' => 'spa', 'Sp1g29670' => 'spa', 'Sp1g39600' => 'spa', 'Sp2g11080' => 'spa', 'Sp2g13970' => 'spa', 'Sp4g16130' => 'spa', 'Sp6g13080' => 'spa', 'Sp7g37270' => 'spa', 'TAR371G0065' => 'tar', 'TAR376G0340' => 'tar', 'TAR376G0435' => 'tar', 'TAR381G0002' => 'tar', 'TAR381G1236' => 'tar', 'TAR624G0055' => 'tar', 'TAR624G0324' => 'tar', 'TAR624G0696' => 'tar', 'TAR624G0906' => 'tar', 'TAR625G0107' => 'tar', 'TAR626G0015' => 'tar', 'TAR626G1356' => 'tar', 'TAR627G0888' => 'tar', 'TAR628G0399' => 'tar', 'TAR628G1327' => 'tar', 'TAR629G2831' => 'tar', 'TAR629G2874' => 'tar', 'TAR633G1432' => 'tar', 'TAR633G2771' => 'tar', 'THA.LOC104803394' => 'tha', 'THA.LOC104805153' => 'tha', 'THA.LOC104806784' => 'tha', 'THA.LOC104810473' => 'tha', 'THA.LOC104813100' => 'tha', 'THA.LOC104814215' => 'tha', 'THA.LOC104815554' => 'tha', 'THA.LOC104820544' => 'tha', 'THA.LOC104824754' => 'tha', 'THA.LOC104827717' => 'tha', 'Thecc.02G031400' => 'tca', 'Thecc.02G055900' => 'tca', 'Thecc.02G350800' => 'tca', 'Thecc.06G150900' => 'tca', 'Thecc.06G186600' => 'tca', 'Thecc.07G089600' => 'tca', 'Thecc.08G020400' => 'tca', 'Thecc.08G182100' => 'tca', 'Thhalv10000873m.g' => 'esa', 'Thhalv10004185m.g' => 'esa', 'Thhalv10006981m.g' => 'esa', 'Thhalv10007204m.g' => 'esa', 'Thhalv10011374m.g' => 'esa', 'Thhalv10013482m.g' => 'esa', 'Thhalv10017801m.g' => 'esa', 'Thhalv10024983m.g' => 'esa', 'TPR.G12072' => 'tpr', 'TPR.G15769' => 'tpr', 'TPR.G16504' => 'tpr', 'TPR.G16506' => 'tpr', 'TPR.G24345' => 'tpr', 'TPR.G26666' => 'tpr', 'TPR.G27320' => 'tpr', 'TPR.G31819' => 'tpr', 'TPR.G38879' => 'tpr', 'TPR.G39015' => 'tpr', 'TPR.G8819' => 'tpr', 'TWI09G0924' => 'twi', 'TWI12G0811' => 'twi', 'TWI12G1294' => 'twi', 'TWI31G0150' => 'twi', 'TWI36G1262' => 'twi', 'TWI38G1287' => 'twi', 'TWI38G1633' => 'twi', 'TWI38G1982' => 'twi', 'TWI39G0116' => 'twi', 'TWI60G1011' => 'twi', 'TWI63G0171' => 'twi', 'TWI73G0839' => 'twi', 'TWI79G1511' => 'twi', 'unitig_0.g915' => 'ugi', 'unitig_0.g916' => 'ugi', 'unitig_21.g20219' => 'ugi', 'unitig_21.g20416' => 'ugi', 'unitig_578.g16132' => 'ugi', 'unitig_578.g16718' => 'ugi', 'unitig_62.g23481' => 'ugi', 'unitig_744.g24535' => 'ugi', 'unitig_749.g13525' => 'ugi', 'vmacro01248' => 'vma', 'vmacro02290' => 'vma', 'vmacro10946' => 'vma', 'vmacro11865' => 'vma', 'vmacro12493' => 'vma', 'vmacro17322' => 'vma', 'vmacro21599' => 'vma', 'vmacro23041' => 'vma', 'VMungo0251G0004' => 'vmu', 'VMungo0251G2639' => 'vmu', 'VMungo0251G2967' => 'vmu', 'VMungo0540G0864' => 'vmu', 'VMungo0540G1569' => 'vmu', 'VMungo0647G0317' => 'vmu', 'VMungo0720G1373' => 'vmu', 'VMungo0720G1508' => 'vmu', 'VMungo1080G0485' => 'vmu', 'VMungo1215G3177' => 'vmu', 'Zm00001eb112600' => 'zma', 'Zm00001eb120220' => 'zma', 'Zm00001eb153240' => 'zma', 'Zm00001eb168880' => 'zma', 'Zm00001eb213920' => 'zma', 'Zm00001eb228280' => 'zma', 'Zm00001eb254580' => 'zma', 'Zm00001eb272180' => 'zma', 'Zm00001eb293190' => 'zma', 'Zm00001eb322930' => 'zma', 'Zm00001eb353360' => 'zma', 'Zm00001eb353390' => 'zma', 'Zm00001eb353430' => 'zma', 'Zm00001eb353440' => 'zma', 'Zm00001eb353780' => 'zma' ) $gf_id = 'HOM05D000499' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000499' ) $data_identifier = 'HOM05D000499' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 29, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 12, 'amhyb' => (int) 8, 'aly' => (int) 12, 'aox' => (int) 9, 'arhy' => (int) 26, 'ath' => (int) 8, 'atr' => (int) 7, 'acertr' => (int) 10, 'cqu' => (int) 15, 'bca' => (int) 29, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 11, 'cansat' => (int) 8, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 9, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 8, 'cpa' => (int) 10, 'csa' => (int) 7, 'camsi' => (int) 20, 'dca' => (int) 8, 'din' => (int) 12, 'dzi' => (int) 14, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 6, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 38, 'gra' => (int) 16, 'vvi' => (int) 8, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 5, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 11, 'lja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 11, 'mpo' => (int) 3, 'mbi' => (int) 14, 'mdo' => (int) 14, 'mtr' => (int) 8, 'cme' => (int) 9, 'egut' => (int) 9, 'ama' => (int) 11, 'nta' => (int) 17, 'nnu' => (int) 11, 'oeu' => (int) 18, 'osa' => (int) 8, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 6, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 9, 'rsi' => (int) 9, 'sbr' => (int) 10, 'sbo' => (int) 8, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 10, 'sas' => (int) 10, 'shi' => (int) 6, 'smo' => (int) 7, 'sly' => (int) 14, 'spe' => (int) 10, 'spa' => (int) 8, 'tar' => (int) 19, 'tha' => (int) 10, 'tca' => (int) 8, 'esa' => (int) 8, 'tpr' => (int) 11, 'twi' => (int) 13, 'ugi' => (int) 9, 'vma' => (int) 8, 'vmu' => (int) 10, 'zma' => (int) 15 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb353780' $species_info = array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ) $local_species = 'ach' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000499', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1066', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p29780' => 'bna', 'A02p33180' => 'bna', 'A03p16470' => 'bna', 'A03p66010' => 'bna', 'A04p25970' => 'bna', 'A06p01270' => 'bna', 'A06p46080' => 'bna', 'A07p11400' => 'bna', 'A08p01840' => 'bna', 'A08p08230' => 'bna', 'A08p25740' => 'bna', 'A09p32070' => 'bna', 'A09p37830' => 'bna', 'A09p42840' => 'bna', 'A09p42850' => 'bna', 'Aa31LG10G2060' => 'aar', 'Aa31LG2G7410' => 'aar', 'Aa31LG6G10200' => 'aar', 'Aa31LG6G16680' => 'aar', 'Aa31LG6G8470' => 'aar', 'Aa31LG9G12730' => 'aar', 'Aa31LG9G13680' => 'aar', 'Aa31LG9G14920' => 'aar', 'Aa31LG9G6650' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4977' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5467' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3254' => 'aag', 'Actinidia02578' => 'ach', 'Actinidia07693' => 'ach', 'Actinidia08413' => 'ach', 'Actinidia08414' => 'ach', 'Actinidia15289' => 'ach', 'Actinidia19871' => 'ach', 'Actinidia21475' => 'ach', 'Actinidia22576' => 'ach', 'Actinidia28327' => 'ach', 'Actinidia32491' => 'ach', 'Actinidia39463' => 'ach', 'Actinidia39571' => 'ach', 'Ah.01g013750' => 'amhyb', 'Ah.01g023210' => 'amhyb', 'Ah.04g164850' => 'amhyb', 'Ah.05g178060' => 'amhyb', 'Ah.07g204270' => 'amhyb', 'Ah.07g208480' => 'amhyb', 'Ah.09g237410' => 'amhyb', 'Ah.14g089460' => 'amhyb', 'AL1G41790' => 'aly', 'AL1G49050' => 'aly', 'AL1G53810' => 'aly', 'AL1G61400' => 'aly', 'AL4G18580' => 'aly', 'AL5G12510' => 'aly', 'AL5G12540' => 'aly', 'AL6G43230' => 'aly', 'AL7G10370' => 'aly', 'AL7G19250' => 'aly', 'AL8G12240' => 'aly', 'AL8G18540' => 'aly', 'Aqoxy1G02409' => 'aox', 'Aqoxy2G03993' => 'aox', 'Aqoxy3G03357' => 'aox', 'Aqoxy4G00785' => 'aox', 'Aqoxy5G02598' => 'aox', 'Aqoxy6G00132' => 'aox', 'Aqoxy7G01776' => 'aox', 'Aqoxy7G02316' => 'aox', 'Aqoxy7G03973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.12AFKW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B8730' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27IQR1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3F75VG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3RE0GA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41TCQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.527VTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FIR39' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5W8UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DA38EV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ63HS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H1I32C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HC27T5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4M8AP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7N3CZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9UVDZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LS1NQA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT1D4B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SKC4TM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCFV76' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF9Q1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQWD9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1ZM88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WE07RT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YCK7VH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJE6Q6' => 'arhy', 'AT1G28240' => 'ath', 'AT1G34550' => 'ath', 'AT1G53040' => 'ath', 'AT2G02910' => 'ath', 'AT4G09630' => 'ath', 'AT4G38500' => 'ath', 'AT5G42660' => 'ath', 'AT5G46220' => 'ath', 'ATR0152G026' => 'atr', 'ATR0564G343' => 'atr', 'ATR0706G151' => 'atr', 'ATR0733G207' => 'atr', 'ATR0751G234' => 'atr', 'ATR0807G048' => 'atr', 'ATR1091G084' => 'atr', 'Atru.chr10.1229' => 'acertr', 'Atru.chr10.1230' => 'acertr', 'Atru.chr10.1874' => 'acertr', 'Atru.chr11.1808' => 'acertr', 'Atru.chr13.1795' => 'acertr', 'Atru.chr13.570' => 'acertr', 'Atru.chr2.2608' => 'acertr', 'Atru.chr2.2609' => 'acertr', 'Atru.chr5.3428' => 'acertr', 'Atru.chr8.1171' => 'acertr', 'AUR62004651' => 'cqu', 'AUR62008675' => 'cqu', 'AUR62010014' => 'cqu', 'AUR62013004' => 'cqu', 'AUR62014825' => 'cqu', 'AUR62015015' => 'cqu', 'AUR62015151' => 'cqu', 'AUR62017020' => 'cqu', 'AUR62019422' => 'cqu', 'AUR62023570' => 'cqu', 'AUR62025571' => 'cqu', 'AUR62029098' => 'cqu', 'AUR62033863' => 'cqu', 'AUR62034296' => 'cqu', 'AUR62040075' => 'cqu', 'BcaB02g07334' => 'bca', 'BcaB02g10575' => 'bca', 'BcaB03g12119' => 'bca', 'BcaB03g12120' => 'bca', 'BcaB03g13945' => 'bca', 'BcaB04g17123' => 'bca', 'BcaB04g17867' => 'bca', 'BcaB04g19839' => 'bca', 'BcaB07g30317' => 'bca', 'BcaB07g32432' => 'bca', 'BcaB07g33362' => 'bca', 'BcaB08g36611' => 'bca', 'BcaC01g00028' => 'bca', 'BcaC01g01356' => 'bca', 'BcaC01g02034' => 'bca', 'BcaC01g06051' => 'bca', 'BcaC03g16839' => 'bca', 'BcaC03g17176' => 'bca', 'BcaC05g26829' => 'bca', 'BcaC06g31490' => 'bca', 'BcaC06g35344' => 'bca', 'BcaC06g36570' => 'bca', 'BcaC07g37537' => 'bca', 'BcaC08g43491' => 'bca', 'BcaC08g43773' => 'bca', 'BcaNung00234' => 'bca', 'BcaNung01982' => 'bca', 'BcaNung03707' => 'bca', 'BcaNung06454' => 'bca', 'BolC2t10762H' => 'bol', 'BolC2t11191H' => 'bol', 'BolC3t14322H' => 'bol', 'BolC3t19747H' => 'bol', 'BolC3t21425H' => 'bol', 'BolC4t27800H' => 'bol', 'BolC5t31423H' => 'bol', 'BolC6t35951H' => 'bol', 'BolC6t36282H' => 'bol', 'BolC7t40678H' => 'bol', 'BolC7t40679H' => 'bol', 'BolC7t42222H' => 'bol', 'BolC7t43492H' => 'bol', 'BolC7t46785H' => 'bol', 'BolC8t47853H' => 'bol', 'BolC9t56805H' => 'bol', 'BraA02t08000Z' => 'bra', 'BraA02t08341Z' => 'bra', 'BraA03t10936Z' => 'bra', 'BraA03t15657Z' => 'bra', 'BraA04t18100Z' => 'bra', 'BraA05t20523Z' => 'bra', 'BraA06t23353Z' => 'bra', 'BraA06t27473Z' => 'bra', 'BraA06t27769Z' => 'bra', 'BraA07t28928Z' => 'bra', 'BraA08t32236Z' => 'bra', 'BraA08t32841Z' => 'bra', 'BraA08t34524Z' => 'bra', 'BraA09t38742Z' => 'bra', 'BraA09t39295Z' => 'bra', 'C02p47180' => 'bna', 'C02p50990' => 'bna', 'C03p19360' => 'bna', 'C03p74950' => 'bna', 'C03p91000' => 'bna', 'C04p63260' => 'bna', 'C05p27050' => 'bna', 'C06p08750' => 'bna', 'C06p11490' => 'bna', 'C07p02820' => 'bna', 'C07p17180' => 'bna', 'C07p29440' => 'bna', 'C07p63730' => 'bna', 'C09p39260' => 'bna', 'CAN.G1164.34' => 'can', 'CAN.G1164.39' => 'can', 'CAN.G1530.3' => 'can', 'CAN.G162.61' => 'can', 'CAN.G176.6' => 'can', 'CAN.G289.49' => 'can', 'CAN.G370.21' => 'can', 'CAN.G370.22' => 'can', 'CAN.G371.117' => 'can', 'CAN.G58.37' => 'can', 'CAN.G588.98' => 'can', 'CANSAT21G2266' => 'cansat', 'CANSAT25G2799' => 'cansat', 'CANSAT35G0862' => 'cansat', 'CANSAT35G1704' => 'cansat', 'CANSAT35G1760' => 'cansat', 'CANSAT56G3971' => 'cansat', 'CANSAT56G4116' => 'cansat', 'CANSAT80G1259' => 'cansat', 'CARHR027730' => 'chi', 'CARHR033880' => 'chi', 'CARHR043270' => 'chi', 'CARHR145330' => 'chi', 'CARHR145340' => 'chi', 'CARHR175570' => 'chi', 'CARHR181570' => 'chi', 'CARHR258470' => 'chi', 'CARHR260490' => 'chi', 'CARHR294220' => 'chi', 'Carub.0001s2668' => 'cru', 'Carub.0001s3257' => 'cru', 'Carub.0001s4220' => 'cru', 'Carub.0005s0179' => 'cru', 'Carub.0006s2807' => 'cru', 'Carub.0007s0039' => 'cru', 'Carub.0008s0169' => 'cru', 'Carub.0008s0636' => 'cru', 'Ca_00338_v3' => 'car', 'Ca_00542_v3' => 'car', 'Ca_01844_v3' => 'car', 'Ca_10611_v3' => 'car', 'Ca_13326_v3' => 'car', 'Ca_17944_v3' => 'car', 'Ca_18546_v3' => 'car', 'Ca_24219_v3' => 'car', 'Ca_29972_v3' => 'car', 'CBR_g3681' => 'cbr', 'CBR_g40021' => 'cbr', 'Cc01_g08140' => 'ccan', 'Cc02_g13410' => 'ccan', 'Cc02_g37480' => 'ccan', 'Cc05_g12030' => 'ccan', 'Cc09_g03370' => 'ccan', 'Cc09_g10300' => 'ccan', 'Cc10_g03530' => 'ccan', 'Cc10_g11380' => 'ccan', 'CDE01G0176' => 'cde', 'CDE02G0675' => 'cde', 'CDE02G0942' => 'cde', 'CDE02G1153' => 'cde', 'CDE02G4177' => 'cde', 'CDE04G2117' => 'cde', 'CDE04G2736' => 'cde', 'CDE08G1161' => 'cde', 'CDE09G1238' => 'cde', 'Cfa000467' => 'cfa', 'Cfa000947' => 'cfa', 'Cfa004969' => 'cfa', 'Cfa005284' => 'cfa', 'Cfa008993' => 'cfa', 'Cfa018187' => 'cfa', 'Cfa018454' => 'cfa', 'Cfa020585' => 'cfa', 'Ciclev10000424m.g' => 'ccl', 'Ciclev10003605m.g' => 'ccl', 'Ciclev10007828m.g' => 'ccl', 'Ciclev10014620m.g' => 'ccl', 'Ciclev10015169m.g' => 'ccl', 'Ciclev10018291m.g' => 'ccl', 'Ciclev10028256m.g' => 'ccl', 'Ciclev10033822m.g' => 'ccl', 'CiPaw.05G060300' => 'cil', 'CiPaw.05G085000' => 'cil', 'CiPaw.06G083700' => 'cil', 'CiPaw.06G120300' => 'cil', 'CiPaw.09G060500' => 'cil', 'CiPaw.09G123800' => 'cil', 'CiPaw.11G169700' => 'cil', 'CiPaw.12G118300' => 'cil', 'CiPaw.15G071000' => 'cil', 'CiPaw.15G081900' => 'cil', 'ClCG01G024610' => 'cla', 'ClCG03G006070' => 'cla', 'ClCG05G019250' => 'cla', 'ClCG09G009500' => 'cla', 'ClCG11G008200' => 'cla', 'ClCG11G018080' => 'cla', 'COL.COLO4_17373' => 'col', 'COL.COLO4_22994' => 'col', 'COL.COLO4_26389' => 'col', 'COL.COLO4_27170' => 'col', 'COL.COLO4_31074' => 'col', 'COL.COLO4_31465' => 'col', 'COL.COLO4_36438' => 'col', 'COL.COLO4_36439' => 'col', 'Cpa.g.c38781' => 'cpa', 'Cpa.g.sc128.12' => 'cpa', 'Cpa.g.sc166.7' => 'cpa', 'Cpa.g.sc166.8' => 'cpa', 'Cpa.g.sc20.111' => 'cpa', 'Cpa.g.sc27.31' => 'cpa', 'Cpa.g.sc64.36' => 'cpa', 'Cpa.g.sc64.37' => 'cpa', 'Cpa.g.sc66.49' => 'cpa', 'Cpa.g.sc80.64' => 'cpa', 'CsaV3_1G012320' => 'csa', 'CsaV3_2G008480' => 'csa', 'CsaV3_2G033450' => 'csa', 'CsaV3_3G044830' => 'csa', 'CsaV3_4G033710' => 'csa', 'CsaV3_6G051730' => 'csa', 'CsaV3_7G025350' => 'csa', 'CSS0001067' => 'camsi', 'CSS0005996' => 'camsi', 'CSS0006590' => 'camsi', 'CSS0009673' => 'camsi', 'CSS0010201' => 'camsi', 'CSS0010549' => 'camsi', 'CSS0011364' => 'camsi', 'CSS0014473' => 'camsi', 'CSS0014961' => 'camsi', 'CSS0020191' => 'camsi', 'CSS0021165' => 'camsi', 'CSS0022306' => 'camsi', 'CSS0030591' => 'camsi', 'CSS0030696' => 'camsi', 'CSS0032653' => 'camsi', 'CSS0037487' => 'camsi', 'CSS0041102' => 'camsi', 'CSS0041261' => 'camsi', 'CSS0046246' => 'camsi', 'CSS0049256' => 'camsi', 'DCAR_004075' => 'dca', 'DCAR_011538' => 'dca', 'DCAR_019553' => 'dca', 'DCAR_020952' => 'dca', 'DCAR_021739' => 'dca', 'DCAR_027407' => 'dca', 'DCAR_027913' => 'dca', 'DCAR_028066' => 'dca', 'Dinv05899' => 'din', 'Dinv07563' => 'din', 'Dinv08010' => 'din', 'Dinv14125' => 'din', 'Dinv20172' => 'din', 'Dinv30743' => 'din', 'Dinv31229' => 'din', 'Dinv34162' => 'din', 'Dinv36028' => 'din', 'Dinv39368' => 'din', 'Dinv40565' => 'din', 'Dinv41706' => 'din', 'Duzib052G0089' => 'dzi', 'Duzib116G0641' => 'dzi', 'Duzib132G0069' => 'dzi', 'Duzib132G1219' => 'dzi', 'Duzib147G0278' => 'dzi', 'Duzib160G0480' => 'dzi', 'Duzib170G0661' => 'dzi', 'Duzib177G0591' => 'dzi', 'Duzib187G1353' => 'dzi', 'Duzib192G0858' => 'dzi', 'Duzib192G0883' => 'dzi', 'Duzib213G0506' => 'dzi', 'Duzib235G0289' => 'dzi', 'Duzib251G0422' => 'dzi', 'ECA232G3898' => 'eca', 'ECA233G5950' => 'eca', 'ECA234G1699' => 'eca', 'ECA234G2421' => 'eca', 'ECA236G0426' => 'eca', 'ECA236G4331' => 'eca', 'ECA248G2573' => 'eca', 'EL10Ac1g00077' => 'bvu', 'EL10Ac1g01746' => 'bvu', 'EL10Ac2g03464' => 'bvu', 'EL10Ac4g08176' => 'bvu', 'EL10Ac7g17521' => 'bvu', 'EL10Ac8g20386' => 'bvu', 'EL10Ac9g21343' => 'bvu', 'EL10Ac9g22688' => 'bvu', 'Eucgr.B03434' => 'egr', 'Eucgr.D00618' => 'egr', 'Eucgr.E02395' => 'egr', 'Eucgr.F01129' => 'egr', 'Eucgr.F02622' => 'egr', 'Eucgr.F04207' => 'egr', 'FAN01G0570' => 'fan', 'FAN03G3351' => 'fan', 'FAN06G3702' => 'fan', 'FAN07G2149' => 'fan', 'FAN10G3758' => 'fan', 'FAN11G1170' => 'fan', 'FAN11G2050' => 'fan', 'FAN11G2724' => 'fan', 'FAN12G1700' => 'fan', 'FAN12G2028' => 'fan', 'FAN15G1160' => 'fan', 'FAN15G3063' => 'fan', 'FAN16G2540' => 'fan', 'FAN16G3077' => 'fan', 'FAN16G3624' => 'fan', 'FAN17G0221' => 'fan', 'FAN20G2492' => 'fan', 'FAN20G2905' => 'fan', 'FAN21G0548' => 'fan', 'FAN21G1300' => 'fan', 'FAN22G0077' => 'fan', 'FAN22G1315' => 'fan', 'FAN24G1280' => 'fan', 'FAN24G1445' => 'fan', 'FAN24G3527' => 'fan', 'FAN25G0464' => 'fan', 'FAN25G2885' => 'fan', 'FAN25G3270' => 'fan', 'FAN27G1101' => 'fan', 'FAN27G2846' => 'fan', 'FAN27G3524' => 'fan', 'FvH4_2g11770' => 'fve', 'FvH4_2g15630' => 'fve', 'FvH4_3g05570' => 'fve', 'FvH4_3g09110' => 'fve', 'FvH4_3g19940' => 'fve', 'FvH4_4g04821' => 'fve', 'FvH4_4g31480' => 'fve', 'FvH4_7g01740' => 'fve', 'Glyma.05G130400' => 'gma', 'Glyma.05G156400' => 'gma', 'Glyma.07G197000' => 'gma', 'Glyma.08G085151' => 'gma', 'Glyma.08G114500' => 'gma', 'Glyma.08G300400' => 'gma', 'Glyma.10G215800' => 'gma', 'Glyma.12G224400' => 'gma', 'Glyma.13G179300' => 'gma', 'Glyma.13G218151' => 'gma', 'Glyma.13G238800' => 'gma', 'Glyma.13G276900' => 'gma', 'Glyma.14G078200' => 'gma', 'Glyma.15G074500' => 'gma', 'Glyma.15G094100' => 'gma', 'Glyma.17G247200' => 'gma', 'Glyma.18G120100' => 'gma', 'Glyma.20G176000' => 'gma', 'Gohir.A01G063600' => 'ghi', 'Gohir.A01G170301' => 'ghi', 'Gohir.A02G060500' => 'ghi', 'Gohir.A05G133850' => 'ghi', 'Gohir.A05G161400' => 'ghi', 'Gohir.A06G012900' => 'ghi', 'Gohir.A06G035901' => 'ghi', 'Gohir.A06G127100' => 'ghi', 'Gohir.A06G210500' => 'ghi', 'Gohir.A08G008650' => 'ghi', 'Gohir.A09G072700' => 'ghi', 'Gohir.A09G088301' => 'ghi', 'Gohir.A10G040600' => 'ghi', 'Gohir.A12G036300' => 'ghi', 'Gohir.A12G143350' => 'ghi', 'Gohir.A12G165500' => 'ghi', 'Gohir.A13G145700' => 'ghi', 'Gohir.D01G050000' => 'ghi', 'Gohir.D01G051366' => 'ghi', 'Gohir.D01G161350' => 'ghi', 'Gohir.D02G065900' => 'ghi', 'Gohir.D05G164200' => 'ghi', 'Gohir.D05G355500' => 'ghi', 'Gohir.D06G010400' => 'ghi', 'Gohir.D06G111250' => 'ghi', 'Gohir.D06G132000' => 'ghi', 'Gohir.D06G210500' => 'ghi', 'Gohir.D07G165675' => 'ghi', 'Gohir.D08G062240' => 'ghi', 'Gohir.D08G086101' => 'ghi', 'Gohir.D08G138060' => 'ghi', 'Gohir.D09G072300' => 'ghi', 'Gohir.D10G041400' => 'ghi', 'Gohir.D11G191020' => 'ghi', 'Gohir.D11G212066' => 'ghi', 'Gohir.D12G036300' => 'ghi', 'Gohir.D12G168600' => 'ghi', 'Gohir.D13G150600' => 'ghi', 'Gorai.001G057300' => 'gra', 'Gorai.002G069900' => 'gra', 'Gorai.002G200000' => 'gra', 'Gorai.003G067600' => 'gra', 'Gorai.005G074800' => 'gra', 'Gorai.006G087300' => 'gra', 'Gorai.008G037500' => 'gra', 'Gorai.008G181400' => 'gra', 'Gorai.009G169400' => 'gra', 'Gorai.009G387900' => 'gra', 'Gorai.010G013300' => 'gra', 'Gorai.010G153800' => 'gra', 'Gorai.010G255800' => 'gra', 'Gorai.011G043700' => 'gra', 'Gorai.011G198900' => 'gra', 'Gorai.013G168400' => 'gra', 'GSVIVG01005212001' => 'vvi', 'GSVIVG01006163001' => 'vvi', 'GSVIVG01009625001' => 'vvi', 'GSVIVG01014338001' => 'vvi', 'GSVIVG01020005001' => 'vvi', 'GSVIVG01021450001' => 'vvi', 'GSVIVG01023975001' => 'vvi', 'GSVIVG01034490001' => 'vvi', 'HanXRQChr04g0112071' => 'han', 'HanXRQChr05g0131151' => 'han', 'HanXRQChr09g0262371' => 'han', 'HanXRQChr09g0268401' => 'han', 'HanXRQChr10g0279241' => 'han', 'HanXRQChr10g0297961' => 'han', 'HanXRQChr11g0326231' => 'han', 'HanXRQChr11g0328471' => 'han', 'HanXRQChr16g0507941' => 'han', 'HanXRQChr17g0560211' => 'han', 'Haze_02108' => 'cav', 'Haze_02428' => 'cav', 'Haze_05593' => 'cav', 'Haze_06448' => 'cav', 'Haze_09427' => 'cav', 'Haze_12022' => 'cav', 'Haze_17612' => 'cav', 'Haze_17928' => 'cav', 'Hma1.2p1_0032F.1_g019250' => 'hma', 'Hma1.2p1_0163F.1_g072690' => 'hma', 'Hma1.2p1_0265F.1_g106710' => 'hma', 'Hma1.2p1_0286F.1_g113970' => 'hma', 'Hma1.2p1_0363F.1_g136640' => 'hma', 'Hma1.2p1_0584F.1_g183470' => 'hma', 'Hma1.2p1_0885F.1_g232570' => 'hma', 'HPP92_006022' => 'vpl', 'HPP92_007320' => 'vpl', 'HPP92_011521' => 'vpl', 'HPP92_019387' => 'vpl', 'HPP92_024038' => 'vpl', 'Hund05891' => 'sun', 'Hund06450' => 'sun', 'Hund12053' => 'sun', 'Hund16800' => 'sun', 'Hund21222' => 'sun', 'Hund22896' => 'sun', 'Hund23746' => 'sun', 'Hund27083' => 'sun', 'Lalb_Chr02g0141831' => 'lal', 'Lalb_Chr02g0141841' => 'lal', 'Lalb_Chr05g0220411' => 'lal', 'Lalb_Chr06g0162081' => 'lal', 'Lalb_Chr09g0327651' => 'lal', 'Lalb_Chr13g0295051' => 'lal', 'Lalb_Chr15g0086801' => 'lal', 'Lalb_Chr16g0383781' => 'lal', 'Lalb_Chr16g0383791' => 'lal', 'Lalb_Chr18g0055441' => 'lal', 'Lalb_Chr18g0059611' => 'lal', 'Lalb_Chr20g0109661' => 'lal', 'Lalb_Chr20g0109831' => 'lal', 'Lalb_Chr20g0121871' => 'lal', 'Lalb_Chr22g0355361' => 'lal', 'Lalb_Chr25g0286371' => 'lal', 'Lj1A1187G43' => 'lonja', 'Lj1A1205T50' => 'lonja', 'Lj1A800G33' => 'lonja', 'Lj1C1187T7' => 'lonja', 'Lj1C843T11' => 'lonja', 'Lj1g0010940' => 'lja', 'Lj2A288T69' => 'lonja', 'Lj3g0024276' => 'lja', 'Lj4A47T76' => 'lonja', 'Lj4g0005805' => 'lja', 'Lj4g0006097' => 'lja', 'Lj4g0008528' => 'lja', 'Lj4g0024907' => 'lja', 'Lj5g0012472' => 'lja', 'Lj5g0018648' => 'lja', 'Lj6C789G1' => 'lonja', 'Lj6g0004000' => 'lja', 'Lj7A292G67' => 'lonja', 'Lj7A292T64' => 'lonja', 'Lj9A400T58' => 'lonja', 'Lsat_1_v5_gn_1_126181' => 'lsa', 'Lsat_1_v5_gn_4_123041' => 'lsa', 'Lsat_1_v5_gn_4_133620' => 'lsa', 'Lsat_1_v5_gn_4_53221' => 'lsa', 'Lsat_1_v5_gn_4_71961' => 'lsa', 'Lsat_1_v5_gn_7_105241' => 'lsa', 'Lsat_1_v5_gn_7_21361' => 'lsa', 'Lsat_1_v5_gn_7_28860' => 'lsa', 'Lsat_1_v5_gn_7_31260' => 'lsa', 'Lsat_1_v5_gn_8_52801' => 'lsa', 'Manes.02G191400' => 'mes', 'Manes.03G110100' => 'mes', 'Manes.04G071100' => 'mes', 'Manes.05G100500' => 'mes', 'Manes.05G164700' => 'mes', 'Manes.15G087000' => 'mes', 'Manes.15G121500' => 'mes', 'Manes.16G028300' => 'mes', 'Manes.17G046100' => 'mes', 'Manes.17G069800' => 'mes', 'Manes.18G100500' => 'mes', 'Mapoly0002s0109' => 'mpo', 'Mapoly0024s0007' => 'mpo', 'Mapoly0089s0032' => 'mpo', 'MBI04_g42241_MAGBIO' => 'mbi', 'MBI05_g11988_MAGBIO' => 'mbi', 'MBI05_g35452_MAGBIO' => 'mbi', 'MBI07_g30179_MAGBIO' => 'mbi', 'MBI07_g35859_MAGBIO' => 'mbi', 'MBI07_g35860_MAGBIO' => 'mbi', 'MBI07_g37166_MAGBIO' => 'mbi', 'MBI08_g18172_MAGBIO' => 'mbi', 'MBI09_g08441_MAGBIO' => 'mbi', 'MBI13_g01676_MAGBIO' => 'mbi', 'MBI14_g42955_MAGBIO' => 'mbi', 'MBI16_g13161_MAGBIO' => 'mbi', 'MBI17_g27204_MAGBIO' => 'mbi', 'MBI19_g21595_MAGBIO' => 'mbi', 'MD00G1148400' => 'mdo', 'MD02G1301200' => 'mdo', 'MD03G1227800' => 'mdo', 'MD05G1041100' => 'mdo', 'MD05G1124800' => 'mdo', 'MD05G1284000' => 'mdo', 'MD05G1338800' => 'mdo', 'MD05G1338900' => 'mdo', 'MD07G1022800' => 'mdo', 'MD10G1047500' => 'mdo', 'MD10G1127500' => 'mdo', 'MD10G1262300' => 'mdo', 'MD10G1293800' => 'mdo', 'MD16G1074300' => 'mdo', 'Medtr1g021670' => 'mtr', 'Medtr1g096320' => 'mtr', 'Medtr2g013690' => 'mtr', 'Medtr2g019450' => 'mtr', 'Medtr2g085170' => 'mtr', 'Medtr4g088785' => 'mtr', 'Medtr8g055930' => 'mtr', 'Medtr8g085850' => 'mtr', 'MELO3C002605.2' => 'cme', 'MELO3C003891.2' => 'cme', 'MELO3C004012.2' => 'cme', 'MELO3C007134.2' => 'cme', 'MELO3C008118.2' => 'cme', 'MELO3C016700.2' => 'cme', 'MELO3C024127.2' => 'cme', 'MELO3C033361.2' => 'cme', 'MELO3C033362.2' => 'cme', 'Migut.C00430' => 'egut', 'Migut.C01246' => 'egut', 'Migut.E00101' => 'egut', 'Migut.H01486' => 'egut', 'Migut.H01939' => 'egut', 'Migut.K00360' => 'egut', 'Migut.M00910' => 'egut', 'Migut.M01139' => 'egut', 'Migut.N02677' => 'egut', 'MSTRG.13252' => 'ama', 'MSTRG.14701' => 'ama', 'MSTRG.1521' => 'ama', 'MSTRG.15884' => 'ama', 'MSTRG.16242' => 'ama', 'MSTRG.22285' => 'ama', 'MSTRG.22444' => 'ama', 'MSTRG.2349' => 'ama', 'MSTRG.26308' => 'ama', 'MSTRG.28296' => 'ama', 'MSTRG.9895' => 'ama', 'Nitab4.5_0000110g0060' => 'nta', 'Nitab4.5_0000420g0130' => 'nta', 'Nitab4.5_0000422g0030' => 'nta', 'Nitab4.5_0000560g0180' => 'nta', 'Nitab4.5_0000703g0100' => 'nta', 'Nitab4.5_0000786g0200' => 'nta', 'Nitab4.5_0001336g0020' => 'nta', 'Nitab4.5_0001796g0030' => 'nta', 'Nitab4.5_0003348g0060' => 'nta', 'Nitab4.5_0003698g0040' => 'nta', 'Nitab4.5_0003942g0090' => 'nta', 'Nitab4.5_0004775g0070' => 'nta', 'Nitab4.5_0004864g0030' => 'nta', 'Nitab4.5_0005615g0020' => 'nta', 'Nitab4.5_0009288g0030' => 'nta', 'Nitab4.5_0009341g0010' => 'nta', 'Nitab4.5_0009535g0010' => 'nta', 'Nn1g03995' => 'nnu', 'Nn1g04100' => 'nnu', 'Nn1g06530' => 'nnu', 'Nn3g16404' => 'nnu', 'Nn3g17212' => 'nnu', 'Nn3g20776' => 'nnu', 'Nn3g21923' => 'nnu', 'Nn5g27737' => 'nnu', 'Nn5g29461' => 'nnu', 'Nn7g38355' => 'nnu', 'Nn8g39873' => 'nnu', 'Oeu000548.2' => 'oeu', 'Oeu004672.1' => 'oeu', 'Oeu015605.2' => 'oeu', 'Oeu016092.1' => 'oeu', 'Oeu017879.3' => 'oeu', 'Oeu024910.1' => 'oeu', 'Oeu028965.1' => 'oeu', 'Oeu031269.1' => 'oeu', 'Oeu031270.1' => 'oeu', 'Oeu032535.1' => 'oeu', 'Oeu034151.1' => 'oeu', 'Oeu034152.1' => 'oeu', 'Oeu034588.2' => 'oeu', 'Oeu050846.1' => 'oeu', 'Oeu050849.2' => 'oeu', 'Oeu051063.2' => 'oeu', 'Oeu052368.1' => 'oeu', 'Oeu052370.1' => 'oeu', 'Os01g0210400' => 'osa', 'Os01g0304300' => 'osa', 'Os01g0749100' => 'osa', 'Os02g0745800' => 'osa', 'Os03g0769050' => 'osa', 'Os05g0531500' => 'osa', 'Os06g0724300' => 'osa', 'Os11g0198100' => 'osa', 'Peaxi162Scf00069g01425' => 'pax', 'Peaxi162Scf00280g00811' => 'pax', 'Peaxi162Scf00310g00615' => 'pax', 'Peaxi162Scf00362g00542' => 'pax', 'Peaxi162Scf00461g00310' => 'pax', 'Peaxi162Scf00530g00118' => 'pax', 'Peaxi162Scf00541g00057' => 'pax', 'Peaxi162Scf00661g00017' => 'pax', 'Peaxi162Scf00926g00027' => 'pax', 'Peaxi162Scf01064g00263' => 'pax', 'Peaxi162Scf01211g00135' => 'pax', 'PGR004G2336' => 'pgr', 'PGR042G0327' => 'pgr', 'PGR042G1957' => 'pgr', 'PGR042G2003' => 'pgr', 'PGR042G3929' => 'pgr', 'PGR083G1137' => 'pgr', 'PGR083G1364' => 'pgr', 'PGSC0003DMG400003381' => 'stu', 'PGSC0003DMG400003417' => 'stu', 'PGSC0003DMG400008981' => 'stu', 'PGSC0003DMG400012417' => 'stu', 'PGSC0003DMG400012823' => 'stu', 'PGSC0003DMG400016885' => 'stu', 'PGSC0003DMG400022812' => 'stu', 'PGSC0003DMG400029726' => 'stu', 'PGSC0003DMG401009243' => 'stu', 'PGSC0003DMG401031505' => 'stu', 'PGSC0003DMG402031505' => 'stu', 'Phvul.001G017600' => 'pvu', 'Phvul.002G193500' => 'pvu', 'Phvul.002G228900' => 'pvu', 'Phvul.002G236800' => 'pvu', 'Phvul.003G049500' => 'pvu', 'Phvul.005G072000' => 'pvu', 'Phvul.006G164800' => 'pvu', 'Phvul.006G185100' => 'pvu', 'Phvul.007G090000' => 'pvu', 'Potri.001G399800' => 'ptr', 'Potri.002G149900' => 'ptr', 'Potri.004G044100' => 'ptr', 'Potri.004G177600' => 'ptr', 'Potri.009G138000' => 'ptr', 'Potri.010G094000' => 'ptr', 'Potri.011G053000' => 'ptr', 'Potri.011G119300' => 'ptr', 'Potri.013G113700' => 'ptr', 'Potri.018G107800' => 'ptr', 'Potri.019G084100' => 'ptr', 'Pp3c14_23720' => 'ppa', 'Pp3c16_6340' => 'ppa', 'Pp3c23_13420' => 'ppa', 'Pp3c24_2740' => 'ppa', 'Pp3c25_860' => 'ppa', 'Pp3c8_21750' => 'ppa', 'Prupe.1G273000' => 'ppe', 'Prupe.1G273700' => 'ppe', 'Prupe.1G274100' => 'ppe', 'Prupe.2G023300' => 'ppe', 'Prupe.4G048000' => 'ppe', 'Prupe.4G080400' => 'ppe', 'Prupe.4G181200' => 'ppe', 'Prupe.8G056900' => 'ppe', 'Prupe.8G168700' => 'ppe', 'Psat1g189080' => 'psa', 'Psat1g204760' => 'psa', 'Psat4g175560' => 'psa', 'Psat4g177720' => 'psa', 'Psat5g244240' => 'psa', 'Psat6g010720' => 'psa', 'Psat6g187200' => 'psa', 'Psat7g072040' => 'psa', 'PSO017G3501' => 'pso', 'PSO063G2148' => 'pso', 'PSO063G5608' => 'pso', 'PSO210G6392' => 'pso', 'PSO541G2319' => 'pso', 'PSO541G2836' => 'pso', 'PSO541G4012' => 'pso', 'PSO541G6253' => 'pso', 'PSO675G0580' => 'pso', 'PSO675G0856' => 'pso', 'PSO675G5635' => 'pso', 'PSO675G9157' => 'pso', 'PSO832G1660' => 'pso', 'PSO832G1969' => 'pso', 'QL02p007186' => 'qlo', 'QL02p033904' => 'qlo', 'QL03p064391' => 'qlo', 'QL05p040593' => 'qlo', 'QL05p058242' => 'qlo', 'QL08p021825' => 'qlo', 'QL11p004981' => 'qlo', 'RcHm_v2.0_Chr1g0318301' => 'rch', 'RcHm_v2.0_Chr4g0418501' => 'rch', 'RcHm_v2.0_Chr4g0439971' => 'rch', 'RcHm_v2.0_Chr5g0008541' => 'rch', 'RcHm_v2.0_Chr5g0014101' => 'rch', 'RcHm_v2.0_Chr5g0014131' => 'rch', 'RcHm_v2.0_Chr5g0033621' => 'rch', 'RcHm_v2.0_Chr6g0272041' => 'rch', 'RcHm_v2.0_Chr6g0278831' => 'rch', 'Rhsim02G0130400' => 'rsi', 'Rhsim02G0171100' => 'rsi', 'Rhsim05G0053000' => 'rsi', 'Rhsim05G0053100' => 'rsi', 'Rhsim06G0096500' => 'rsi', 'Rhsim06G0096600' => 'rsi', 'Rhsim06G0199100' => 'rsi', 'Rhsim12G0062300' => 'rsi', 'Rhsim12G0062800' => 'rsi', 'Sabra02G0118600' => 'sbr', 'Sabra04G0027300' => 'sbr', 'Sabra04G0119500' => 'sbr', 'Sabra08G0112500' => 'sbr', 'Sabra11G0036800' => 'sbr', 'Sabra11G0103800' => 'sbr', 'Sabra13G0096300' => 'sbr', 'Sabra16G0262300' => 'sbr', 'Sabra18G0091700' => 'sbr', 'Sabra19G0095400' => 'sbr', 'SalBow6G3080' => 'sbo', 'SalBow7G1157' => 'sbo', 'SalBow7G2123' => 'sbo', 'SalBow7G2285' => 'sbo', 'SalBow7G3537' => 'sbo', 'SalBow8G2947' => 'sbo', 'SalBow8G4463' => 'sbo', 'SalBow8G5466' => 'sbo', 'Sc01g0001750' => 'sci', 'Sc02g0006640' => 'sci', 'Sc02g0006670' => 'sci', 'Sc04g0008220' => 'sci', 'Sc05g0006190' => 'sci', 'Sc08g0002760' => 'sci', 'Sc17g0006170' => 'sci', 'Sc22g0002050' => 'sci', 'Sc23g0001190' => 'sci', 'Sc24g0000980' => 'sci', 'Sed0006245' => 'sed', 'Sed0007543' => 'sed', 'Sed0009411' => 'sed', 'Sed0010765' => 'sed', 'Sed0012944' => 'sed', 'Sed0014682' => 'sed', 'Sed0016174' => 'sed', 'Sed0016796' => 'sed', 'Sed0020317' => 'sed', 'Sed0021467' => 'sed', 'SEGI_01316' => 'sgi', 'SEGI_03374' => 'sgi', 'SEGI_16265' => 'sgi', 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'Solyc03g079860.2' => 'sly', 'Solyc04g079770.3' => 'sly', 'Solyc05g007430.4' => 'sly', 'Solyc07g063150.3' => 'sly', 'Solyc08g016620.3' => 'sly', 'Solyc09g057590.3' => 'sly', 'Solyc09g057600.1' => 'sly', 'Solyc10g009050.3' => 'sly', 'Solyc11g017420.2' => 'sly', 'Sopen01g053810' => 'spe', 'Sopen02g023040' => 'spe', 'Sopen03g002440' => 'spe', 'Sopen04g033350' => 'spe', 'Sopen05g003310' => 'spe', 'Sopen07g004050' => 'spe', 'Sopen07g031340' => 'spe', 'Sopen08g006990' => 'spe', 'Sopen10g004830' => 'spe', 'Sopen11g009370' => 'spe', 'Sp1g24450' => 'spa', 'Sp1g29670' => 'spa', 'Sp1g39600' => 'spa', 'Sp2g11080' => 'spa', 'Sp2g13970' => 'spa', 'Sp4g16130' => 'spa', 'Sp6g13080' => 'spa', 'Sp7g37270' => 'spa', 'TAR371G0065' => 'tar', 'TAR376G0340' => 'tar', 'TAR376G0435' => 'tar', 'TAR381G0002' => 'tar', 'TAR381G1236' => 'tar', 'TAR624G0055' => 'tar', 'TAR624G0324' => 'tar', 'TAR624G0696' => 'tar', 'TAR624G0906' => 'tar', 'TAR625G0107' => 'tar', 'TAR626G0015' => 'tar', 'TAR626G1356' => 'tar', 'TAR627G0888' => 'tar', 'TAR628G0399' => 'tar', 'TAR628G1327' => 'tar', 'TAR629G2831' => 'tar', 'TAR629G2874' => 'tar', 'TAR633G1432' => 'tar', 'TAR633G2771' => 'tar', 'THA.LOC104803394' => 'tha', 'THA.LOC104805153' => 'tha', 'THA.LOC104806784' => 'tha', 'THA.LOC104810473' => 'tha', 'THA.LOC104813100' => 'tha', 'THA.LOC104814215' => 'tha', 'THA.LOC104815554' => 'tha', 'THA.LOC104820544' => 'tha', 'THA.LOC104824754' => 'tha', 'THA.LOC104827717' => 'tha', 'Thecc.02G031400' => 'tca', 'Thecc.02G055900' => 'tca', 'Thecc.02G350800' => 'tca', 'Thecc.06G150900' => 'tca', 'Thecc.06G186600' => 'tca', 'Thecc.07G089600' => 'tca', 'Thecc.08G020400' => 'tca', 'Thecc.08G182100' => 'tca', 'Thhalv10000873m.g' => 'esa', 'Thhalv10004185m.g' => 'esa', 'Thhalv10006981m.g' => 'esa', 'Thhalv10007204m.g' => 'esa', 'Thhalv10011374m.g' => 'esa', 'Thhalv10013482m.g' => 'esa', 'Thhalv10017801m.g' => 'esa', 'Thhalv10024983m.g' => 'esa', 'TPR.G12072' => 'tpr', 'TPR.G15769' => 'tpr', 'TPR.G16504' => 'tpr', 'TPR.G16506' => 'tpr', 'TPR.G24345' => 'tpr', 'TPR.G26666' => 'tpr', 'TPR.G27320' => 'tpr', 'TPR.G31819' => 'tpr', 'TPR.G38879' => 'tpr', 'TPR.G39015' => 'tpr', 'TPR.G8819' => 'tpr', 'TWI09G0924' => 'twi', 'TWI12G0811' => 'twi', 'TWI12G1294' => 'twi', 'TWI31G0150' => 'twi', 'TWI36G1262' => 'twi', 'TWI38G1287' => 'twi', 'TWI38G1633' => 'twi', 'TWI38G1982' => 'twi', 'TWI39G0116' => 'twi', 'TWI60G1011' => 'twi', 'TWI63G0171' => 'twi', 'TWI73G0839' => 'twi', 'TWI79G1511' => 'twi', 'unitig_0.g915' => 'ugi', 'unitig_0.g916' => 'ugi', 'unitig_21.g20219' => 'ugi', 'unitig_21.g20416' => 'ugi', 'unitig_578.g16132' => 'ugi', 'unitig_578.g16718' => 'ugi', 'unitig_62.g23481' => 'ugi', 'unitig_744.g24535' => 'ugi', 'unitig_749.g13525' => 'ugi', 'vmacro01248' => 'vma', 'vmacro02290' => 'vma', 'vmacro10946' => 'vma', 'vmacro11865' => 'vma', 'vmacro12493' => 'vma', 'vmacro17322' => 'vma', 'vmacro21599' => 'vma', 'vmacro23041' => 'vma', 'VMungo0251G0004' => 'vmu', 'VMungo0251G2639' => 'vmu', 'VMungo0251G2967' => 'vmu', 'VMungo0540G0864' => 'vmu', 'VMungo0540G1569' => 'vmu', 'VMungo0647G0317' => 'vmu', 'VMungo0720G1373' => 'vmu', 'VMungo0720G1508' => 'vmu', 'VMungo1080G0485' => 'vmu', 'VMungo1215G3177' => 'vmu', 'Zm00001eb112600' => 'zma', 'Zm00001eb120220' => 'zma', 'Zm00001eb153240' => 'zma', 'Zm00001eb168880' => 'zma', 'Zm00001eb213920' => 'zma', 'Zm00001eb228280' => 'zma', 'Zm00001eb254580' => 'zma', 'Zm00001eb272180' => 'zma', 'Zm00001eb293190' => 'zma', 'Zm00001eb322930' => 'zma', 'Zm00001eb353360' => 'zma', 'Zm00001eb353390' => 'zma', 'Zm00001eb353430' => 'zma', 'Zm00001eb353440' => 'zma', 'Zm00001eb353780' => 'zma' ), 'gf_id' => 'HOM05D000499', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000499' ), 'data_identifier' => 'HOM05D000499', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000499', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1066', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p29780' => 'bna', 'A02p33180' => 'bna', 'A03p16470' => 'bna', 'A03p66010' => 'bna', 'A04p25970' => 'bna', 'A06p01270' => 'bna', 'A06p46080' => 'bna', 'A07p11400' => 'bna', 'A08p01840' => 'bna', 'A08p08230' => 'bna', 'A08p25740' => 'bna', 'A09p32070' => 'bna', 'A09p37830' => 'bna', 'A09p42840' => 'bna', 'A09p42850' => 'bna', 'Aa31LG10G2060' => 'aar', 'Aa31LG2G7410' => 'aar', 'Aa31LG6G10200' => 'aar', 'Aa31LG6G16680' => 'aar', 'Aa31LG6G8470' => 'aar', 'Aa31LG9G12730' => 'aar', 'Aa31LG9G13680' => 'aar', 'Aa31LG9G14920' => 'aar', 'Aa31LG9G6650' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4977' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5467' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3254' => 'aag', 'Actinidia02578' => 'ach', 'Actinidia07693' => 'ach', 'Actinidia08413' => 'ach', 'Actinidia08414' => 'ach', 'Actinidia15289' => 'ach', 'Actinidia19871' => 'ach', 'Actinidia21475' => 'ach', 'Actinidia22576' => 'ach', 'Actinidia28327' => 'ach', 'Actinidia32491' => 'ach', 'Actinidia39463' => 'ach', 'Actinidia39571' => 'ach', 'Ah.01g013750' => 'amhyb', 'Ah.01g023210' => 'amhyb', 'Ah.04g164850' => 'amhyb', 'Ah.05g178060' => 'amhyb', 'Ah.07g204270' => 'amhyb', 'Ah.07g208480' => 'amhyb', 'Ah.09g237410' => 'amhyb', 'Ah.14g089460' => 'amhyb', 'AL1G41790' => 'aly', 'AL1G49050' => 'aly', 'AL1G53810' => 'aly', 'AL1G61400' => 'aly', 'AL4G18580' => 'aly', 'AL5G12510' => 'aly', 'AL5G12540' => 'aly', 'AL6G43230' => 'aly', 'AL7G10370' => 'aly', 'AL7G19250' => 'aly', 'AL8G12240' => 'aly', 'AL8G18540' => 'aly', 'Aqoxy1G02409' => 'aox', 'Aqoxy2G03993' => 'aox', 'Aqoxy3G03357' => 'aox', 'Aqoxy4G00785' => 'aox', 'Aqoxy5G02598' => 'aox', 'Aqoxy6G00132' => 'aox', 'Aqoxy7G01776' => 'aox', 'Aqoxy7G02316' => 'aox', 'Aqoxy7G03973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.12AFKW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B8730' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27IQR1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3F75VG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3RE0GA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41TCQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.527VTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FIR39' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5W8UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DA38EV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ63HS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H1I32C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HC27T5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4M8AP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7N3CZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9UVDZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LS1NQA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT1D4B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SKC4TM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCFV76' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF9Q1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQWD9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1ZM88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WE07RT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YCK7VH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJE6Q6' => 'arhy', 'AT1G28240' => 'ath', 'AT1G34550' => 'ath', 'AT1G53040' => 'ath', 'AT2G02910' => 'ath', 'AT4G09630' => 'ath', 'AT4G38500' => 'ath', 'AT5G42660' => 'ath', 'AT5G46220' => 'ath', 'ATR0152G026' => 'atr', 'ATR0564G343' => 'atr', 'ATR0706G151' => 'atr', 'ATR0733G207' => 'atr', 'ATR0751G234' => 'atr', 'ATR0807G048' => 'atr', 'ATR1091G084' => 'atr', 'Atru.chr10.1229' => 'acertr', 'Atru.chr10.1230' => 'acertr', 'Atru.chr10.1874' => 'acertr', 'Atru.chr11.1808' => 'acertr', 'Atru.chr13.1795' => 'acertr', 'Atru.chr13.570' => 'acertr', 'Atru.chr2.2608' => 'acertr', 'Atru.chr2.2609' => 'acertr', 'Atru.chr5.3428' => 'acertr', 'Atru.chr8.1171' => 'acertr', 'AUR62004651' => 'cqu', 'AUR62008675' => 'cqu', 'AUR62010014' => 'cqu', 'AUR62013004' => 'cqu', 'AUR62014825' => 'cqu', 'AUR62015015' => 'cqu', 'AUR62015151' => 'cqu', 'AUR62017020' => 'cqu', 'AUR62019422' => 'cqu', 'AUR62023570' => 'cqu', 'AUR62025571' => 'cqu', 'AUR62029098' => 'cqu', 'AUR62033863' => 'cqu', 'AUR62034296' => 'cqu', 'AUR62040075' => 'cqu', 'BcaB02g07334' => 'bca', 'BcaB02g10575' => 'bca', 'BcaB03g12119' => 'bca', 'BcaB03g12120' => 'bca', 'BcaB03g13945' => 'bca', 'BcaB04g17123' => 'bca', 'BcaB04g17867' => 'bca', 'BcaB04g19839' => 'bca', 'BcaB07g30317' => 'bca', 'BcaB07g32432' => 'bca', 'BcaB07g33362' => 'bca', 'BcaB08g36611' => 'bca', 'BcaC01g00028' => 'bca', 'BcaC01g01356' => 'bca', 'BcaC01g02034' => 'bca', 'BcaC01g06051' => 'bca', 'BcaC03g16839' => 'bca', 'BcaC03g17176' => 'bca', 'BcaC05g26829' => 'bca', 'BcaC06g31490' => 'bca', 'BcaC06g35344' => 'bca', 'BcaC06g36570' => 'bca', 'BcaC07g37537' => 'bca', 'BcaC08g43491' => 'bca', 'BcaC08g43773' => 'bca', 'BcaNung00234' => 'bca', 'BcaNung01982' => 'bca', 'BcaNung03707' => 'bca', 'BcaNung06454' => 'bca', 'BolC2t10762H' => 'bol', 'BolC2t11191H' => 'bol', 'BolC3t14322H' => 'bol', 'BolC3t19747H' => 'bol', 'BolC3t21425H' => 'bol', 'BolC4t27800H' => 'bol', 'BolC5t31423H' => 'bol', 'BolC6t35951H' => 'bol', 'BolC6t36282H' => 'bol', 'BolC7t40678H' => 'bol', 'BolC7t40679H' => 'bol', 'BolC7t42222H' => 'bol', 'BolC7t43492H' => 'bol', 'BolC7t46785H' => 'bol', 'BolC8t47853H' => 'bol', 'BolC9t56805H' => 'bol', 'BraA02t08000Z' => 'bra', 'BraA02t08341Z' => 'bra', 'BraA03t10936Z' => 'bra', 'BraA03t15657Z' => 'bra', 'BraA04t18100Z' => 'bra', 'BraA05t20523Z' => 'bra', 'BraA06t23353Z' => 'bra', 'BraA06t27473Z' => 'bra', 'BraA06t27769Z' => 'bra', 'BraA07t28928Z' => 'bra', 'BraA08t32236Z' => 'bra', 'BraA08t32841Z' => 'bra', 'BraA08t34524Z' => 'bra', 'BraA09t38742Z' => 'bra', 'BraA09t39295Z' => 'bra', 'C02p47180' => 'bna', 'C02p50990' => 'bna', 'C03p19360' => 'bna', 'C03p74950' => 'bna', 'C03p91000' => 'bna', 'C04p63260' => 'bna', 'C05p27050' => 'bna', 'C06p08750' => 'bna', 'C06p11490' => 'bna', 'C07p02820' => 'bna', 'C07p17180' => 'bna', 'C07p29440' => 'bna', 'C07p63730' => 'bna', 'C09p39260' => 'bna', 'CAN.G1164.34' => 'can', 'CAN.G1164.39' => 'can', 'CAN.G1530.3' => 'can', 'CAN.G162.61' => 'can', 'CAN.G176.6' => 'can', 'CAN.G289.49' => 'can', 'CAN.G370.21' => 'can', 'CAN.G370.22' => 'can', 'CAN.G371.117' => 'can', 'CAN.G58.37' => 'can', 'CAN.G588.98' => 'can', 'CANSAT21G2266' => 'cansat', 'CANSAT25G2799' => 'cansat', 'CANSAT35G0862' => 'cansat', 'CANSAT35G1704' => 'cansat', 'CANSAT35G1760' => 'cansat', 'CANSAT56G3971' => 'cansat', 'CANSAT56G4116' => 'cansat', 'CANSAT80G1259' => 'cansat', 'CARHR027730' => 'chi', 'CARHR033880' => 'chi', 'CARHR043270' => 'chi', 'CARHR145330' => 'chi', 'CARHR145340' => 'chi', 'CARHR175570' => 'chi', 'CARHR181570' => 'chi', 'CARHR258470' => 'chi', 'CARHR260490' => 'chi', 'CARHR294220' => 'chi', 'Carub.0001s2668' => 'cru', 'Carub.0001s3257' => 'cru', 'Carub.0001s4220' => 'cru', 'Carub.0005s0179' => 'cru', 'Carub.0006s2807' => 'cru', 'Carub.0007s0039' => 'cru', 'Carub.0008s0169' => 'cru', 'Carub.0008s0636' => 'cru', 'Ca_00338_v3' => 'car', 'Ca_00542_v3' => 'car', 'Ca_01844_v3' => 'car', 'Ca_10611_v3' => 'car', 'Ca_13326_v3' => 'car', 'Ca_17944_v3' => 'car', 'Ca_18546_v3' => 'car', 'Ca_24219_v3' => 'car', 'Ca_29972_v3' => 'car', 'CBR_g3681' => 'cbr', 'CBR_g40021' => 'cbr', 'Cc01_g08140' => 'ccan', 'Cc02_g13410' => 'ccan', 'Cc02_g37480' => 'ccan', 'Cc05_g12030' => 'ccan', 'Cc09_g03370' => 'ccan', 'Cc09_g10300' => 'ccan', 'Cc10_g03530' => 'ccan', 'Cc10_g11380' => 'ccan', 'CDE01G0176' => 'cde', 'CDE02G0675' => 'cde', 'CDE02G0942' => 'cde', 'CDE02G1153' => 'cde', 'CDE02G4177' => 'cde', 'CDE04G2117' => 'cde', 'CDE04G2736' => 'cde', 'CDE08G1161' => 'cde', 'CDE09G1238' => 'cde', 'Cfa000467' => 'cfa', 'Cfa000947' => 'cfa', 'Cfa004969' => 'cfa', 'Cfa005284' => 'cfa', 'Cfa008993' => 'cfa', 'Cfa018187' => 'cfa', 'Cfa018454' => 'cfa', 'Cfa020585' => 'cfa', 'Ciclev10000424m.g' => 'ccl', 'Ciclev10003605m.g' => 'ccl', 'Ciclev10007828m.g' => 'ccl', 'Ciclev10014620m.g' => 'ccl', 'Ciclev10015169m.g' => 'ccl', 'Ciclev10018291m.g' => 'ccl', 'Ciclev10028256m.g' => 'ccl', 'Ciclev10033822m.g' => 'ccl', 'CiPaw.05G060300' => 'cil', 'CiPaw.05G085000' => 'cil', 'CiPaw.06G083700' => 'cil', 'CiPaw.06G120300' => 'cil', 'CiPaw.09G060500' => 'cil', 'CiPaw.09G123800' => 'cil', 'CiPaw.11G169700' => 'cil', 'CiPaw.12G118300' => 'cil', 'CiPaw.15G071000' => 'cil', 'CiPaw.15G081900' => 'cil', 'ClCG01G024610' => 'cla', 'ClCG03G006070' => 'cla', 'ClCG05G019250' => 'cla', 'ClCG09G009500' => 'cla', 'ClCG11G008200' => 'cla', 'ClCG11G018080' => 'cla', 'COL.COLO4_17373' => 'col', 'COL.COLO4_22994' => 'col', 'COL.COLO4_26389' => 'col', 'COL.COLO4_27170' => 'col', 'COL.COLO4_31074' => 'col', 'COL.COLO4_31465' => 'col', 'COL.COLO4_36438' => 'col', 'COL.COLO4_36439' => 'col', 'Cpa.g.c38781' => 'cpa', 'Cpa.g.sc128.12' => 'cpa', 'Cpa.g.sc166.7' => 'cpa', 'Cpa.g.sc166.8' => 'cpa', 'Cpa.g.sc20.111' => 'cpa', 'Cpa.g.sc27.31' => 'cpa', 'Cpa.g.sc64.36' => 'cpa', 'Cpa.g.sc64.37' => 'cpa', 'Cpa.g.sc66.49' => 'cpa', 'Cpa.g.sc80.64' => 'cpa', 'CsaV3_1G012320' => 'csa', 'CsaV3_2G008480' => 'csa', 'CsaV3_2G033450' => 'csa', 'CsaV3_3G044830' => 'csa', 'CsaV3_4G033710' => 'csa', 'CsaV3_6G051730' => 'csa', 'CsaV3_7G025350' => 'csa', 'CSS0001067' => 'camsi', 'CSS0005996' => 'camsi', 'CSS0006590' => 'camsi', 'CSS0009673' => 'camsi', 'CSS0010201' => 'camsi', 'CSS0010549' => 'camsi', 'CSS0011364' => 'camsi', 'CSS0014473' => 'camsi', 'CSS0014961' => 'camsi', 'CSS0020191' => 'camsi', 'CSS0021165' => 'camsi', 'CSS0022306' => 'camsi', 'CSS0030591' => 'camsi', 'CSS0030696' => 'camsi', 'CSS0032653' => 'camsi', 'CSS0037487' => 'camsi', 'CSS0041102' => 'camsi', 'CSS0041261' => 'camsi', 'CSS0046246' => 'camsi', 'CSS0049256' => 'camsi', 'DCAR_004075' => 'dca', 'DCAR_011538' => 'dca', 'DCAR_019553' => 'dca', 'DCAR_020952' => 'dca', 'DCAR_021739' => 'dca', 'DCAR_027407' => 'dca', 'DCAR_027913' => 'dca', 'DCAR_028066' => 'dca', 'Dinv05899' => 'din', 'Dinv07563' => 'din', 'Dinv08010' => 'din', 'Dinv14125' => 'din', 'Dinv20172' => 'din', 'Dinv30743' => 'din', 'Dinv31229' => 'din', 'Dinv34162' => 'din', 'Dinv36028' => 'din', 'Dinv39368' => 'din', 'Dinv40565' => 'din', 'Dinv41706' => 'din', 'Duzib052G0089' => 'dzi', 'Duzib116G0641' => 'dzi', 'Duzib132G0069' => 'dzi', 'Duzib132G1219' => 'dzi', 'Duzib147G0278' => 'dzi', 'Duzib160G0480' => 'dzi', 'Duzib170G0661' => 'dzi', 'Duzib177G0591' => 'dzi', 'Duzib187G1353' => 'dzi', 'Duzib192G0858' => 'dzi', 'Duzib192G0883' => 'dzi', 'Duzib213G0506' => 'dzi', 'Duzib235G0289' => 'dzi', 'Duzib251G0422' => 'dzi', 'ECA232G3898' => 'eca', 'ECA233G5950' => 'eca', 'ECA234G1699' => 'eca', 'ECA234G2421' => 'eca', 'ECA236G0426' => 'eca', 'ECA236G4331' => 'eca', 'ECA248G2573' => 'eca', 'EL10Ac1g00077' => 'bvu', 'EL10Ac1g01746' => 'bvu', 'EL10Ac2g03464' => 'bvu', 'EL10Ac4g08176' => 'bvu', 'EL10Ac7g17521' => 'bvu', 'EL10Ac8g20386' => 'bvu', 'EL10Ac9g21343' => 'bvu', 'EL10Ac9g22688' => 'bvu', 'Eucgr.B03434' => 'egr', 'Eucgr.D00618' => 'egr', 'Eucgr.E02395' => 'egr', 'Eucgr.F01129' => 'egr', 'Eucgr.F02622' => 'egr', 'Eucgr.F04207' => 'egr', 'FAN01G0570' => 'fan', 'FAN03G3351' => 'fan', 'FAN06G3702' => 'fan', 'FAN07G2149' => 'fan', 'FAN10G3758' => 'fan', 'FAN11G1170' => 'fan', 'FAN11G2050' => 'fan', 'FAN11G2724' => 'fan', 'FAN12G1700' => 'fan', 'FAN12G2028' => 'fan', 'FAN15G1160' => 'fan', 'FAN15G3063' => 'fan', 'FAN16G2540' => 'fan', 'FAN16G3077' => 'fan', 'FAN16G3624' => 'fan', 'FAN17G0221' => 'fan', 'FAN20G2492' => 'fan', 'FAN20G2905' => 'fan', 'FAN21G0548' => 'fan', 'FAN21G1300' => 'fan', 'FAN22G0077' => 'fan', 'FAN22G1315' => 'fan', 'FAN24G1280' => 'fan', 'FAN24G1445' => 'fan', 'FAN24G3527' => 'fan', 'FAN25G0464' => 'fan', 'FAN25G2885' => 'fan', 'FAN25G3270' => 'fan', 'FAN27G1101' => 'fan', 'FAN27G2846' => 'fan', 'FAN27G3524' => 'fan', 'FvH4_2g11770' => 'fve', 'FvH4_2g15630' => 'fve', 'FvH4_3g05570' => 'fve', 'FvH4_3g09110' => 'fve', 'FvH4_3g19940' => 'fve', 'FvH4_4g04821' => 'fve', 'FvH4_4g31480' => 'fve', 'FvH4_7g01740' => 'fve', 'Glyma.05G130400' => 'gma', 'Glyma.05G156400' => 'gma', 'Glyma.07G197000' => 'gma', 'Glyma.08G085151' => 'gma', 'Glyma.08G114500' => 'gma', 'Glyma.08G300400' => 'gma', 'Glyma.10G215800' => 'gma', 'Glyma.12G224400' => 'gma', 'Glyma.13G179300' => 'gma', 'Glyma.13G218151' => 'gma', 'Glyma.13G238800' => 'gma', 'Glyma.13G276900' => 'gma', 'Glyma.14G078200' => 'gma', 'Glyma.15G074500' => 'gma', 'Glyma.15G094100' => 'gma', 'Glyma.17G247200' => 'gma', 'Glyma.18G120100' => 'gma', 'Glyma.20G176000' => 'gma', 'Gohir.A01G063600' => 'ghi', 'Gohir.A01G170301' => 'ghi', 'Gohir.A02G060500' => 'ghi', 'Gohir.A05G133850' => 'ghi', 'Gohir.A05G161400' => 'ghi', 'Gohir.A06G012900' => 'ghi', 'Gohir.A06G035901' => 'ghi', 'Gohir.A06G127100' => 'ghi', 'Gohir.A06G210500' => 'ghi', 'Gohir.A08G008650' => 'ghi', 'Gohir.A09G072700' => 'ghi', 'Gohir.A09G088301' => 'ghi', 'Gohir.A10G040600' => 'ghi', 'Gohir.A12G036300' => 'ghi', 'Gohir.A12G143350' => 'ghi', 'Gohir.A12G165500' => 'ghi', 'Gohir.A13G145700' => 'ghi', 'Gohir.D01G050000' => 'ghi', 'Gohir.D01G051366' => 'ghi', 'Gohir.D01G161350' => 'ghi', 'Gohir.D02G065900' => 'ghi', 'Gohir.D05G164200' => 'ghi', 'Gohir.D05G355500' => 'ghi', 'Gohir.D06G010400' => 'ghi', 'Gohir.D06G111250' => 'ghi', 'Gohir.D06G132000' => 'ghi', 'Gohir.D06G210500' => 'ghi', 'Gohir.D07G165675' => 'ghi', 'Gohir.D08G062240' => 'ghi', 'Gohir.D08G086101' => 'ghi', 'Gohir.D08G138060' => 'ghi', 'Gohir.D09G072300' => 'ghi', 'Gohir.D10G041400' => 'ghi', 'Gohir.D11G191020' => 'ghi', 'Gohir.D11G212066' => 'ghi', 'Gohir.D12G036300' => 'ghi', 'Gohir.D12G168600' => 'ghi', 'Gohir.D13G150600' => 'ghi', 'Gorai.001G057300' => 'gra', 'Gorai.002G069900' => 'gra', 'Gorai.002G200000' => 'gra', 'Gorai.003G067600' => 'gra', 'Gorai.005G074800' => 'gra', 'Gorai.006G087300' => 'gra', 'Gorai.008G037500' => 'gra', 'Gorai.008G181400' => 'gra', 'Gorai.009G169400' => 'gra', 'Gorai.009G387900' => 'gra', 'Gorai.010G013300' => 'gra', 'Gorai.010G153800' => 'gra', 'Gorai.010G255800' => 'gra', 'Gorai.011G043700' => 'gra', 'Gorai.011G198900' => 'gra', 'Gorai.013G168400' => 'gra', 'GSVIVG01005212001' => 'vvi', 'GSVIVG01006163001' => 'vvi', 'GSVIVG01009625001' => 'vvi', 'GSVIVG01014338001' => 'vvi', 'GSVIVG01020005001' => 'vvi', 'GSVIVG01021450001' => 'vvi', 'GSVIVG01023975001' => 'vvi', 'GSVIVG01034490001' => 'vvi', 'HanXRQChr04g0112071' => 'han', 'HanXRQChr05g0131151' => 'han', 'HanXRQChr09g0262371' => 'han', 'HanXRQChr09g0268401' => 'han', 'HanXRQChr10g0279241' => 'han', 'HanXRQChr10g0297961' => 'han', 'HanXRQChr11g0326231' => 'han', 'HanXRQChr11g0328471' => 'han', 'HanXRQChr16g0507941' => 'han', 'HanXRQChr17g0560211' => 'han', 'Haze_02108' => 'cav', 'Haze_02428' => 'cav', 'Haze_05593' => 'cav', 'Haze_06448' => 'cav', 'Haze_09427' => 'cav', 'Haze_12022' => 'cav', 'Haze_17612' => 'cav', 'Haze_17928' => 'cav', 'Hma1.2p1_0032F.1_g019250' => 'hma', 'Hma1.2p1_0163F.1_g072690' => 'hma', 'Hma1.2p1_0265F.1_g106710' => 'hma', 'Hma1.2p1_0286F.1_g113970' => 'hma', 'Hma1.2p1_0363F.1_g136640' => 'hma', 'Hma1.2p1_0584F.1_g183470' => 'hma', 'Hma1.2p1_0885F.1_g232570' => 'hma', 'HPP92_006022' => 'vpl', 'HPP92_007320' => 'vpl', 'HPP92_011521' => 'vpl', 'HPP92_019387' => 'vpl', 'HPP92_024038' => 'vpl', 'Hund05891' => 'sun', 'Hund06450' => 'sun', 'Hund12053' => 'sun', 'Hund16800' => 'sun', 'Hund21222' => 'sun', 'Hund22896' => 'sun', 'Hund23746' => 'sun', 'Hund27083' => 'sun', 'Lalb_Chr02g0141831' => 'lal', 'Lalb_Chr02g0141841' => 'lal', 'Lalb_Chr05g0220411' => 'lal', 'Lalb_Chr06g0162081' => 'lal', 'Lalb_Chr09g0327651' => 'lal', 'Lalb_Chr13g0295051' => 'lal', 'Lalb_Chr15g0086801' => 'lal', 'Lalb_Chr16g0383781' => 'lal', 'Lalb_Chr16g0383791' => 'lal', 'Lalb_Chr18g0055441' => 'lal', 'Lalb_Chr18g0059611' => 'lal', 'Lalb_Chr20g0109661' => 'lal', 'Lalb_Chr20g0109831' => 'lal', 'Lalb_Chr20g0121871' => 'lal', 'Lalb_Chr22g0355361' => 'lal', 'Lalb_Chr25g0286371' => 'lal', 'Lj1A1187G43' => 'lonja', 'Lj1A1205T50' => 'lonja', 'Lj1A800G33' => 'lonja', 'Lj1C1187T7' => 'lonja', 'Lj1C843T11' => 'lonja', 'Lj1g0010940' => 'lja', 'Lj2A288T69' => 'lonja', 'Lj3g0024276' => 'lja', 'Lj4A47T76' => 'lonja', 'Lj4g0005805' => 'lja', 'Lj4g0006097' => 'lja', 'Lj4g0008528' => 'lja', 'Lj4g0024907' => 'lja', 'Lj5g0012472' => 'lja', 'Lj5g0018648' => 'lja', 'Lj6C789G1' => 'lonja', 'Lj6g0004000' => 'lja', 'Lj7A292G67' => 'lonja', 'Lj7A292T64' => 'lonja', 'Lj9A400T58' => 'lonja', 'Lsat_1_v5_gn_1_126181' => 'lsa', 'Lsat_1_v5_gn_4_123041' => 'lsa', 'Lsat_1_v5_gn_4_133620' => 'lsa', 'Lsat_1_v5_gn_4_53221' => 'lsa', 'Lsat_1_v5_gn_4_71961' => 'lsa', 'Lsat_1_v5_gn_7_105241' => 'lsa', 'Lsat_1_v5_gn_7_21361' => 'lsa', 'Lsat_1_v5_gn_7_28860' => 'lsa', 'Lsat_1_v5_gn_7_31260' => 'lsa', 'Lsat_1_v5_gn_8_52801' => 'lsa', 'Manes.02G191400' => 'mes', 'Manes.03G110100' => 'mes', 'Manes.04G071100' => 'mes', 'Manes.05G100500' => 'mes', 'Manes.05G164700' => 'mes', 'Manes.15G087000' => 'mes', 'Manes.15G121500' => 'mes', 'Manes.16G028300' => 'mes', 'Manes.17G046100' => 'mes', 'Manes.17G069800' => 'mes', 'Manes.18G100500' => 'mes', 'Mapoly0002s0109' => 'mpo', 'Mapoly0024s0007' => 'mpo', 'Mapoly0089s0032' => 'mpo', 'MBI04_g42241_MAGBIO' => 'mbi', 'MBI05_g11988_MAGBIO' => 'mbi', 'MBI05_g35452_MAGBIO' => 'mbi', 'MBI07_g30179_MAGBIO' => 'mbi', 'MBI07_g35859_MAGBIO' => 'mbi', 'MBI07_g35860_MAGBIO' => 'mbi', 'MBI07_g37166_MAGBIO' => 'mbi', 'MBI08_g18172_MAGBIO' => 'mbi', 'MBI09_g08441_MAGBIO' => 'mbi', 'MBI13_g01676_MAGBIO' => 'mbi', 'MBI14_g42955_MAGBIO' => 'mbi', 'MBI16_g13161_MAGBIO' => 'mbi', 'MBI17_g27204_MAGBIO' => 'mbi', 'MBI19_g21595_MAGBIO' => 'mbi', 'MD00G1148400' => 'mdo', 'MD02G1301200' => 'mdo', 'MD03G1227800' => 'mdo', 'MD05G1041100' => 'mdo', 'MD05G1124800' => 'mdo', 'MD05G1284000' => 'mdo', 'MD05G1338800' => 'mdo', 'MD05G1338900' => 'mdo', 'MD07G1022800' => 'mdo', 'MD10G1047500' => 'mdo', 'MD10G1127500' => 'mdo', 'MD10G1262300' => 'mdo', 'MD10G1293800' => 'mdo', 'MD16G1074300' => 'mdo', 'Medtr1g021670' => 'mtr', 'Medtr1g096320' => 'mtr', 'Medtr2g013690' => 'mtr', 'Medtr2g019450' => 'mtr', 'Medtr2g085170' => 'mtr', 'Medtr4g088785' => 'mtr', 'Medtr8g055930' => 'mtr', 'Medtr8g085850' => 'mtr', 'MELO3C002605.2' => 'cme', 'MELO3C003891.2' => 'cme', 'MELO3C004012.2' => 'cme', 'MELO3C007134.2' => 'cme', 'MELO3C008118.2' => 'cme', 'MELO3C016700.2' => 'cme', 'MELO3C024127.2' => 'cme', 'MELO3C033361.2' => 'cme', 'MELO3C033362.2' => 'cme', 'Migut.C00430' => 'egut', 'Migut.C01246' => 'egut', 'Migut.E00101' => 'egut', 'Migut.H01486' => 'egut', 'Migut.H01939' => 'egut', 'Migut.K00360' => 'egut', 'Migut.M00910' => 'egut', 'Migut.M01139' => 'egut', 'Migut.N02677' => 'egut', 'MSTRG.13252' => 'ama', 'MSTRG.14701' => 'ama', 'MSTRG.1521' => 'ama', 'MSTRG.15884' => 'ama', 'MSTRG.16242' => 'ama', 'MSTRG.22285' => 'ama', 'MSTRG.22444' => 'ama', 'MSTRG.2349' => 'ama', 'MSTRG.26308' => 'ama', 'MSTRG.28296' => 'ama', 'MSTRG.9895' => 'ama', 'Nitab4.5_0000110g0060' => 'nta', 'Nitab4.5_0000420g0130' => 'nta', 'Nitab4.5_0000422g0030' => 'nta', 'Nitab4.5_0000560g0180' => 'nta', 'Nitab4.5_0000703g0100' => 'nta', 'Nitab4.5_0000786g0200' => 'nta', 'Nitab4.5_0001336g0020' => 'nta', 'Nitab4.5_0001796g0030' => 'nta', 'Nitab4.5_0003348g0060' => 'nta', 'Nitab4.5_0003698g0040' => 'nta', 'Nitab4.5_0003942g0090' => 'nta', 'Nitab4.5_0004775g0070' => 'nta', 'Nitab4.5_0004864g0030' => 'nta', 'Nitab4.5_0005615g0020' => 'nta', 'Nitab4.5_0009288g0030' => 'nta', 'Nitab4.5_0009341g0010' => 'nta', 'Nitab4.5_0009535g0010' => 'nta', 'Nn1g03995' => 'nnu', 'Nn1g04100' => 'nnu', 'Nn1g06530' => 'nnu', 'Nn3g16404' => 'nnu', 'Nn3g17212' => 'nnu', 'Nn3g20776' => 'nnu', 'Nn3g21923' => 'nnu', 'Nn5g27737' => 'nnu', 'Nn5g29461' => 'nnu', 'Nn7g38355' => 'nnu', 'Nn8g39873' => 'nnu', 'Oeu000548.2' => 'oeu', 'Oeu004672.1' => 'oeu', 'Oeu015605.2' => 'oeu', 'Oeu016092.1' => 'oeu', 'Oeu017879.3' => 'oeu', 'Oeu024910.1' => 'oeu', 'Oeu028965.1' => 'oeu', 'Oeu031269.1' => 'oeu', 'Oeu031270.1' => 'oeu', 'Oeu032535.1' => 'oeu', 'Oeu034151.1' => 'oeu', 'Oeu034152.1' => 'oeu', 'Oeu034588.2' => 'oeu', 'Oeu050846.1' => 'oeu', 'Oeu050849.2' => 'oeu', 'Oeu051063.2' => 'oeu', 'Oeu052368.1' => 'oeu', 'Oeu052370.1' => 'oeu', 'Os01g0210400' => 'osa', 'Os01g0304300' => 'osa', 'Os01g0749100' => 'osa', 'Os02g0745800' => 'osa', 'Os03g0769050' => 'osa', 'Os05g0531500' => 'osa', 'Os06g0724300' => 'osa', 'Os11g0198100' => 'osa', 'Peaxi162Scf00069g01425' => 'pax', 'Peaxi162Scf00280g00811' => 'pax', 'Peaxi162Scf00310g00615' => 'pax', 'Peaxi162Scf00362g00542' => 'pax', 'Peaxi162Scf00461g00310' => 'pax', 'Peaxi162Scf00530g00118' => 'pax', 'Peaxi162Scf00541g00057' => 'pax', 'Peaxi162Scf00661g00017' => 'pax', 'Peaxi162Scf00926g00027' => 'pax', 'Peaxi162Scf01064g00263' => 'pax', 'Peaxi162Scf01211g00135' => 'pax', 'PGR004G2336' => 'pgr', 'PGR042G0327' => 'pgr', 'PGR042G1957' => 'pgr', 'PGR042G2003' => 'pgr', 'PGR042G3929' => 'pgr', 'PGR083G1137' => 'pgr', 'PGR083G1364' => 'pgr', 'PGSC0003DMG400003381' => 'stu', 'PGSC0003DMG400003417' => 'stu', 'PGSC0003DMG400008981' => 'stu', 'PGSC0003DMG400012417' => 'stu', 'PGSC0003DMG400012823' => 'stu', 'PGSC0003DMG400016885' => 'stu', 'PGSC0003DMG400022812' => 'stu', 'PGSC0003DMG400029726' => 'stu', 'PGSC0003DMG401009243' => 'stu', 'PGSC0003DMG401031505' => 'stu', 'PGSC0003DMG402031505' => 'stu', 'Phvul.001G017600' => 'pvu', 'Phvul.002G193500' => 'pvu', 'Phvul.002G228900' => 'pvu', 'Phvul.002G236800' => 'pvu', 'Phvul.003G049500' => 'pvu', 'Phvul.005G072000' => 'pvu', 'Phvul.006G164800' => 'pvu', 'Phvul.006G185100' => 'pvu', 'Phvul.007G090000' => 'pvu', 'Potri.001G399800' => 'ptr', 'Potri.002G149900' => 'ptr', 'Potri.004G044100' => 'ptr', 'Potri.004G177600' => 'ptr', 'Potri.009G138000' => 'ptr', 'Potri.010G094000' => 'ptr', 'Potri.011G053000' => 'ptr', 'Potri.011G119300' => 'ptr', 'Potri.013G113700' => 'ptr', 'Potri.018G107800' => 'ptr', 'Potri.019G084100' => 'ptr', 'Pp3c14_23720' => 'ppa', 'Pp3c16_6340' => 'ppa', 'Pp3c23_13420' => 'ppa', 'Pp3c24_2740' => 'ppa', 'Pp3c25_860' => 'ppa', 'Pp3c8_21750' => 'ppa', 'Prupe.1G273000' => 'ppe', 'Prupe.1G273700' => 'ppe', 'Prupe.1G274100' => 'ppe', 'Prupe.2G023300' => 'ppe', 'Prupe.4G048000' => 'ppe', 'Prupe.4G080400' => 'ppe', 'Prupe.4G181200' => 'ppe', 'Prupe.8G056900' => 'ppe', 'Prupe.8G168700' => 'ppe', 'Psat1g189080' => 'psa', 'Psat1g204760' => 'psa', 'Psat4g175560' => 'psa', 'Psat4g177720' => 'psa', 'Psat5g244240' => 'psa', 'Psat6g010720' => 'psa', 'Psat6g187200' => 'psa', 'Psat7g072040' => 'psa', 'PSO017G3501' => 'pso', 'PSO063G2148' => 'pso', 'PSO063G5608' => 'pso', 'PSO210G6392' => 'pso', 'PSO541G2319' => 'pso', 'PSO541G2836' => 'pso', 'PSO541G4012' => 'pso', 'PSO541G6253' => 'pso', 'PSO675G0580' => 'pso', 'PSO675G0856' => 'pso', 'PSO675G5635' => 'pso', 'PSO675G9157' => 'pso', 'PSO832G1660' => 'pso', 'PSO832G1969' => 'pso', 'QL02p007186' => 'qlo', 'QL02p033904' => 'qlo', 'QL03p064391' => 'qlo', 'QL05p040593' => 'qlo', 'QL05p058242' => 'qlo', 'QL08p021825' => 'qlo', 'QL11p004981' => 'qlo', 'RcHm_v2.0_Chr1g0318301' => 'rch', 'RcHm_v2.0_Chr4g0418501' => 'rch', 'RcHm_v2.0_Chr4g0439971' => 'rch', 'RcHm_v2.0_Chr5g0008541' => 'rch', 'RcHm_v2.0_Chr5g0014101' => 'rch', 'RcHm_v2.0_Chr5g0014131' => 'rch', 'RcHm_v2.0_Chr5g0033621' => 'rch', 'RcHm_v2.0_Chr6g0272041' => 'rch', 'RcHm_v2.0_Chr6g0278831' => 'rch', 'Rhsim02G0130400' => 'rsi', 'Rhsim02G0171100' => 'rsi', 'Rhsim05G0053000' => 'rsi', 'Rhsim05G0053100' => 'rsi', 'Rhsim06G0096500' => 'rsi', 'Rhsim06G0096600' => 'rsi', 'Rhsim06G0199100' => 'rsi', 'Rhsim12G0062300' => 'rsi', 'Rhsim12G0062800' => 'rsi', 'Sabra02G0118600' => 'sbr', 'Sabra04G0027300' => 'sbr', 'Sabra04G0119500' => 'sbr', 'Sabra08G0112500' => 'sbr', 'Sabra11G0036800' => 'sbr', 'Sabra11G0103800' => 'sbr', 'Sabra13G0096300' => 'sbr', 'Sabra16G0262300' => 'sbr', 'Sabra18G0091700' => 'sbr', 'Sabra19G0095400' => 'sbr', 'SalBow6G3080' => 'sbo', 'SalBow7G1157' => 'sbo', 'SalBow7G2123' => 'sbo', 'SalBow7G2285' => 'sbo', 'SalBow7G3537' => 'sbo', 'SalBow8G2947' => 'sbo', 'SalBow8G4463' => 'sbo', 'SalBow8G5466' => 'sbo', 'Sc01g0001750' => 'sci', 'Sc02g0006640' => 'sci', 'Sc02g0006670' => 'sci', 'Sc04g0008220' => 'sci', 'Sc05g0006190' => 'sci', 'Sc08g0002760' => 'sci', 'Sc17g0006170' => 'sci', 'Sc22g0002050' => 'sci', 'Sc23g0001190' => 'sci', 'Sc24g0000980' => 'sci', 'Sed0006245' => 'sed', 'Sed0007543' => 'sed', 'Sed0009411' => 'sed', 'Sed0010765' => 'sed', 'Sed0012944' => 'sed', 'Sed0014682' => 'sed', 'Sed0016174' => 'sed', 'Sed0016796' => 'sed', 'Sed0020317' => 'sed', 'Sed0021467' => 'sed', 'SEGI_01316' => 'sgi', 'SEGI_03374' => 'sgi', 'SEGI_16265' => 'sgi', 'SEGI_18569' => 'sgi', 'SEGI_20351' => 'sgi', 'SEGI_26395' => 'sgi', 'SEGI_29469' => 'sgi', 'SEGI_34771' => 'sgi', 'SEGI_36769' => 'sgi', 'SEGI_37139' => 'sgi', 'SGA_v2.0_scaffold100G29687' => 'sas', 'SGA_v2.0_scaffold118G32472' => 'sas', 'SGA_v2.0_scaffold14G07051' => 'sas', 'SGA_v2.0_scaffold183G39845' => 'sas', 'SGA_v2.0_scaffold1G00174' => 'sas', 'SGA_v2.0_scaffold22G09714' => 'sas', 'SGA_v2.0_scaffold333G48992' => 'sas', 'SGA_v2.0_scaffold46G17491' => 'sas', 'SGA_v2.0_scaffold49G18294' => 'sas', 'SGA_v2.0_scaffold63G21658' => 'sas', 'SHI01741' => 'shi', 'SHI05771' => 'shi', 'SHI18077' => 'shi', 'SHI20525' => 'shi', 'SHI20527' => 'shi', 'SHI20528' => 'shi', 'SMO172G0185' => 'smo', 'SMO198G0020' => 'smo', 'SMO351G0006' => 'smo', 'SMO356G0118' => 'smo', 'SMO358G0296' => 'smo', 'SMO367G0079' => 'smo', 'SMO367G1277' => 'smo', 'Solyc01g014220.3' => 'sly', 'Solyc01g111770.2' => 'sly', 'Solyc02g078180.3' => 'sly', 'Solyc03g006430.3' => 'sly', 'Solyc03g006456.1' => 'sly', 'Solyc03g079860.2' => 'sly', 'Solyc04g079770.3' => 'sly', 'Solyc05g007430.4' => 'sly', 'Solyc07g063150.3' => 'sly', 'Solyc08g016620.3' => 'sly', 'Solyc09g057590.3' => 'sly', 'Solyc09g057600.1' => 'sly', 'Solyc10g009050.3' => 'sly', 'Solyc11g017420.2' => 'sly', 'Sopen01g053810' => 'spe', 'Sopen02g023040' => 'spe', 'Sopen03g002440' => 'spe', 'Sopen04g033350' => 'spe', 'Sopen05g003310' => 'spe', 'Sopen07g004050' => 'spe', 'Sopen07g031340' => 'spe', 'Sopen08g006990' => 'spe', 'Sopen10g004830' => 'spe', 'Sopen11g009370' => 'spe', 'Sp1g24450' => 'spa', 'Sp1g29670' => 'spa', 'Sp1g39600' => 'spa', 'Sp2g11080' => 'spa', 'Sp2g13970' => 'spa', 'Sp4g16130' => 'spa', 'Sp6g13080' => 'spa', 'Sp7g37270' => 'spa', 'TAR371G0065' => 'tar', 'TAR376G0340' => 'tar', 'TAR376G0435' => 'tar', 'TAR381G0002' => 'tar', 'TAR381G1236' => 'tar', 'TAR624G0055' => 'tar', 'TAR624G0324' => 'tar', 'TAR624G0696' => 'tar', 'TAR624G0906' => 'tar', 'TAR625G0107' => 'tar', 'TAR626G0015' => 'tar', 'TAR626G1356' => 'tar', 'TAR627G0888' => 'tar', 'TAR628G0399' => 'tar', 'TAR628G1327' => 'tar', 'TAR629G2831' => 'tar', 'TAR629G2874' => 'tar', 'TAR633G1432' => 'tar', 'TAR633G2771' => 'tar', 'THA.LOC104803394' => 'tha', 'THA.LOC104805153' => 'tha', 'THA.LOC104806784' => 'tha', 'THA.LOC104810473' => 'tha', 'THA.LOC104813100' => 'tha', 'THA.LOC104814215' => 'tha', 'THA.LOC104815554' => 'tha', 'THA.LOC104820544' => 'tha', 'THA.LOC104824754' => 'tha', 'THA.LOC104827717' => 'tha', 'Thecc.02G031400' => 'tca', 'Thecc.02G055900' => 'tca', 'Thecc.02G350800' => 'tca', 'Thecc.06G150900' => 'tca', 'Thecc.06G186600' => 'tca', 'Thecc.07G089600' => 'tca', 'Thecc.08G020400' => 'tca', 'Thecc.08G182100' => 'tca', 'Thhalv10000873m.g' => 'esa', 'Thhalv10004185m.g' => 'esa', 'Thhalv10006981m.g' => 'esa', 'Thhalv10007204m.g' => 'esa', 'Thhalv10011374m.g' => 'esa', 'Thhalv10013482m.g' => 'esa', 'Thhalv10017801m.g' => 'esa', 'Thhalv10024983m.g' => 'esa', 'TPR.G12072' => 'tpr', 'TPR.G15769' => 'tpr', 'TPR.G16504' => 'tpr', 'TPR.G16506' => 'tpr', 'TPR.G24345' => 'tpr', 'TPR.G26666' => 'tpr', 'TPR.G27320' => 'tpr', 'TPR.G31819' => 'tpr', 'TPR.G38879' => 'tpr', 'TPR.G39015' => 'tpr', 'TPR.G8819' => 'tpr', 'TWI09G0924' => 'twi', 'TWI12G0811' => 'twi', 'TWI12G1294' => 'twi', 'TWI31G0150' => 'twi', 'TWI36G1262' => 'twi', 'TWI38G1287' => 'twi', 'TWI38G1633' => 'twi', 'TWI38G1982' => 'twi', 'TWI39G0116' => 'twi', 'TWI60G1011' => 'twi', 'TWI63G0171' => 'twi', 'TWI73G0839' => 'twi', 'TWI79G1511' => 'twi', 'unitig_0.g915' => 'ugi', 'unitig_0.g916' => 'ugi', 'unitig_21.g20219' => 'ugi', 'unitig_21.g20416' => 'ugi', 'unitig_578.g16132' => 'ugi', 'unitig_578.g16718' => 'ugi', 'unitig_62.g23481' => 'ugi', 'unitig_744.g24535' => 'ugi', 'unitig_749.g13525' => 'ugi', 'vmacro01248' => 'vma', 'vmacro02290' => 'vma', 'vmacro10946' => 'vma', 'vmacro11865' => 'vma', 'vmacro12493' => 'vma', 'vmacro17322' => 'vma', 'vmacro21599' => 'vma', 'vmacro23041' => 'vma', 'VMungo0251G0004' => 'vmu', 'VMungo0251G2639' => 'vmu', 'VMungo0251G2967' => 'vmu', 'VMungo0540G0864' => 'vmu', 'VMungo0540G1569' => 'vmu', 'VMungo0647G0317' => 'vmu', 'VMungo0720G1373' => 'vmu', 'VMungo0720G1508' => 'vmu', 'VMungo1080G0485' => 'vmu', 'VMungo1215G3177' => 'vmu', 'Zm00001eb112600' => 'zma', 'Zm00001eb120220' => 'zma', 'Zm00001eb153240' => 'zma', 'Zm00001eb168880' => 'zma', 'Zm00001eb213920' => 'zma', 'Zm00001eb228280' => 'zma', 'Zm00001eb254580' => 'zma', 'Zm00001eb272180' => 'zma', 'Zm00001eb293190' => 'zma', 'Zm00001eb322930' => 'zma', 'Zm00001eb353360' => 'zma', 'Zm00001eb353390' => 'zma', 'Zm00001eb353430' => 'zma', 'Zm00001eb353440' => 'zma', 'Zm00001eb353780' => 'zma' ) $gf_id = 'HOM05D000499' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000499' ) $data_identifier = 'HOM05D000499' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 29, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 12, 'amhyb' => (int) 8, 'aly' => (int) 12, 'aox' => (int) 9, 'arhy' => (int) 26, 'ath' => (int) 8, 'atr' => (int) 7, 'acertr' => (int) 10, 'cqu' => (int) 15, 'bca' => (int) 29, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 11, 'cansat' => (int) 8, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 9, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 8, 'cpa' => (int) 10, 'csa' => (int) 7, 'camsi' => (int) 20, 'dca' => (int) 8, 'din' => (int) 12, 'dzi' => (int) 14, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 6, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 38, 'gra' => (int) 16, 'vvi' => (int) 8, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 5, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 11, 'lja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 11, 'mpo' => (int) 3, 'mbi' => (int) 14, 'mdo' => (int) 14, 'mtr' => (int) 8, 'cme' => (int) 9, 'egut' => (int) 9, 'ama' => (int) 11, 'nta' => (int) 17, 'nnu' => (int) 11, 'oeu' => (int) 18, 'osa' => (int) 8, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 6, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 9, 'rsi' => (int) 9, 'sbr' => (int) 10, 'sbo' => (int) 8, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 10, 'sas' => (int) 10, 'shi' => (int) 6, 'smo' => (int) 7, 'sly' => (int) 14, 'spe' => (int) 10, 'spa' => (int) 8, 'tar' => (int) 19, 'tha' => (int) 10, 'tca' => (int) 8, 'esa' => (int) 8, 'tpr' => (int) 11, 'twi' => (int) 13, 'ugi' => (int) 9, 'vma' => (int) 8, 'vmu' => (int) 10, 'zma' => (int) 15 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb353780' $species_info = array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ) $local_species = 'aar' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000499', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1066', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p29780' => 'bna', 'A02p33180' => 'bna', 'A03p16470' => 'bna', 'A03p66010' => 'bna', 'A04p25970' => 'bna', 'A06p01270' => 'bna', 'A06p46080' => 'bna', 'A07p11400' => 'bna', 'A08p01840' => 'bna', 'A08p08230' => 'bna', 'A08p25740' => 'bna', 'A09p32070' => 'bna', 'A09p37830' => 'bna', 'A09p42840' => 'bna', 'A09p42850' => 'bna', 'Aa31LG10G2060' => 'aar', 'Aa31LG2G7410' => 'aar', 'Aa31LG6G10200' => 'aar', 'Aa31LG6G16680' => 'aar', 'Aa31LG6G8470' => 'aar', 'Aa31LG9G12730' => 'aar', 'Aa31LG9G13680' => 'aar', 'Aa31LG9G14920' => 'aar', 'Aa31LG9G6650' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4977' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5467' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3254' => 'aag', 'Actinidia02578' => 'ach', 'Actinidia07693' => 'ach', 'Actinidia08413' => 'ach', 'Actinidia08414' => 'ach', 'Actinidia15289' => 'ach', 'Actinidia19871' => 'ach', 'Actinidia21475' => 'ach', 'Actinidia22576' => 'ach', 'Actinidia28327' => 'ach', 'Actinidia32491' => 'ach', 'Actinidia39463' => 'ach', 'Actinidia39571' => 'ach', 'Ah.01g013750' => 'amhyb', 'Ah.01g023210' => 'amhyb', 'Ah.04g164850' => 'amhyb', 'Ah.05g178060' => 'amhyb', 'Ah.07g204270' => 'amhyb', 'Ah.07g208480' => 'amhyb', 'Ah.09g237410' => 'amhyb', 'Ah.14g089460' => 'amhyb', 'AL1G41790' => 'aly', 'AL1G49050' => 'aly', 'AL1G53810' => 'aly', 'AL1G61400' => 'aly', 'AL4G18580' => 'aly', 'AL5G12510' => 'aly', 'AL5G12540' => 'aly', 'AL6G43230' => 'aly', 'AL7G10370' => 'aly', 'AL7G19250' => 'aly', 'AL8G12240' => 'aly', 'AL8G18540' => 'aly', 'Aqoxy1G02409' => 'aox', 'Aqoxy2G03993' => 'aox', 'Aqoxy3G03357' => 'aox', 'Aqoxy4G00785' => 'aox', 'Aqoxy5G02598' => 'aox', 'Aqoxy6G00132' => 'aox', 'Aqoxy7G01776' => 'aox', 'Aqoxy7G02316' => 'aox', 'Aqoxy7G03973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.12AFKW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B8730' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27IQR1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3F75VG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3RE0GA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41TCQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.527VTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FIR39' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5W8UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DA38EV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ63HS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H1I32C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HC27T5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4M8AP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7N3CZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9UVDZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LS1NQA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT1D4B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SKC4TM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCFV76' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF9Q1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQWD9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1ZM88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WE07RT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YCK7VH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJE6Q6' => 'arhy', 'AT1G28240' => 'ath', 'AT1G34550' => 'ath', 'AT1G53040' => 'ath', 'AT2G02910' => 'ath', 'AT4G09630' => 'ath', 'AT4G38500' => 'ath', 'AT5G42660' => 'ath', 'AT5G46220' => 'ath', 'ATR0152G026' => 'atr', 'ATR0564G343' => 'atr', 'ATR0706G151' => 'atr', 'ATR0733G207' => 'atr', 'ATR0751G234' => 'atr', 'ATR0807G048' => 'atr', 'ATR1091G084' => 'atr', 'Atru.chr10.1229' => 'acertr', 'Atru.chr10.1230' => 'acertr', 'Atru.chr10.1874' => 'acertr', 'Atru.chr11.1808' => 'acertr', 'Atru.chr13.1795' => 'acertr', 'Atru.chr13.570' => 'acertr', 'Atru.chr2.2608' => 'acertr', 'Atru.chr2.2609' => 'acertr', 'Atru.chr5.3428' => 'acertr', 'Atru.chr8.1171' => 'acertr', 'AUR62004651' => 'cqu', 'AUR62008675' => 'cqu', 'AUR62010014' => 'cqu', 'AUR62013004' => 'cqu', 'AUR62014825' => 'cqu', 'AUR62015015' => 'cqu', 'AUR62015151' => 'cqu', 'AUR62017020' => 'cqu', 'AUR62019422' => 'cqu', 'AUR62023570' => 'cqu', 'AUR62025571' => 'cqu', 'AUR62029098' => 'cqu', 'AUR62033863' => 'cqu', 'AUR62034296' => 'cqu', 'AUR62040075' => 'cqu', 'BcaB02g07334' => 'bca', 'BcaB02g10575' => 'bca', 'BcaB03g12119' => 'bca', 'BcaB03g12120' => 'bca', 'BcaB03g13945' => 'bca', 'BcaB04g17123' => 'bca', 'BcaB04g17867' => 'bca', 'BcaB04g19839' => 'bca', 'BcaB07g30317' => 'bca', 'BcaB07g32432' => 'bca', 'BcaB07g33362' => 'bca', 'BcaB08g36611' => 'bca', 'BcaC01g00028' => 'bca', 'BcaC01g01356' => 'bca', 'BcaC01g02034' => 'bca', 'BcaC01g06051' => 'bca', 'BcaC03g16839' => 'bca', 'BcaC03g17176' => 'bca', 'BcaC05g26829' => 'bca', 'BcaC06g31490' => 'bca', 'BcaC06g35344' => 'bca', 'BcaC06g36570' => 'bca', 'BcaC07g37537' => 'bca', 'BcaC08g43491' => 'bca', 'BcaC08g43773' => 'bca', 'BcaNung00234' => 'bca', 'BcaNung01982' => 'bca', 'BcaNung03707' => 'bca', 'BcaNung06454' => 'bca', 'BolC2t10762H' => 'bol', 'BolC2t11191H' => 'bol', 'BolC3t14322H' => 'bol', 'BolC3t19747H' => 'bol', 'BolC3t21425H' => 'bol', 'BolC4t27800H' => 'bol', 'BolC5t31423H' => 'bol', 'BolC6t35951H' => 'bol', 'BolC6t36282H' => 'bol', 'BolC7t40678H' => 'bol', 'BolC7t40679H' => 'bol', 'BolC7t42222H' => 'bol', 'BolC7t43492H' => 'bol', 'BolC7t46785H' => 'bol', 'BolC8t47853H' => 'bol', 'BolC9t56805H' => 'bol', 'BraA02t08000Z' => 'bra', 'BraA02t08341Z' => 'bra', 'BraA03t10936Z' => 'bra', 'BraA03t15657Z' => 'bra', 'BraA04t18100Z' => 'bra', 'BraA05t20523Z' => 'bra', 'BraA06t23353Z' => 'bra', 'BraA06t27473Z' => 'bra', 'BraA06t27769Z' => 'bra', 'BraA07t28928Z' => 'bra', 'BraA08t32236Z' => 'bra', 'BraA08t32841Z' => 'bra', 'BraA08t34524Z' => 'bra', 'BraA09t38742Z' => 'bra', 'BraA09t39295Z' => 'bra', 'C02p47180' => 'bna', 'C02p50990' => 'bna', 'C03p19360' => 'bna', 'C03p74950' => 'bna', 'C03p91000' => 'bna', 'C04p63260' => 'bna', 'C05p27050' => 'bna', 'C06p08750' => 'bna', 'C06p11490' => 'bna', 'C07p02820' => 'bna', 'C07p17180' => 'bna', 'C07p29440' => 'bna', 'C07p63730' => 'bna', 'C09p39260' => 'bna', 'CAN.G1164.34' => 'can', 'CAN.G1164.39' => 'can', 'CAN.G1530.3' => 'can', 'CAN.G162.61' => 'can', 'CAN.G176.6' => 'can', 'CAN.G289.49' => 'can', 'CAN.G370.21' => 'can', 'CAN.G370.22' => 'can', 'CAN.G371.117' => 'can', 'CAN.G58.37' => 'can', 'CAN.G588.98' => 'can', 'CANSAT21G2266' => 'cansat', 'CANSAT25G2799' => 'cansat', 'CANSAT35G0862' => 'cansat', 'CANSAT35G1704' => 'cansat', 'CANSAT35G1760' => 'cansat', 'CANSAT56G3971' => 'cansat', 'CANSAT56G4116' => 'cansat', 'CANSAT80G1259' => 'cansat', 'CARHR027730' => 'chi', 'CARHR033880' => 'chi', 'CARHR043270' => 'chi', 'CARHR145330' => 'chi', 'CARHR145340' => 'chi', 'CARHR175570' => 'chi', 'CARHR181570' => 'chi', 'CARHR258470' => 'chi', 'CARHR260490' => 'chi', 'CARHR294220' => 'chi', 'Carub.0001s2668' => 'cru', 'Carub.0001s3257' => 'cru', 'Carub.0001s4220' => 'cru', 'Carub.0005s0179' => 'cru', 'Carub.0006s2807' => 'cru', 'Carub.0007s0039' => 'cru', 'Carub.0008s0169' => 'cru', 'Carub.0008s0636' => 'cru', 'Ca_00338_v3' => 'car', 'Ca_00542_v3' => 'car', 'Ca_01844_v3' => 'car', 'Ca_10611_v3' => 'car', 'Ca_13326_v3' => 'car', 'Ca_17944_v3' => 'car', 'Ca_18546_v3' => 'car', 'Ca_24219_v3' => 'car', 'Ca_29972_v3' => 'car', 'CBR_g3681' => 'cbr', 'CBR_g40021' => 'cbr', 'Cc01_g08140' => 'ccan', 'Cc02_g13410' => 'ccan', 'Cc02_g37480' => 'ccan', 'Cc05_g12030' => 'ccan', 'Cc09_g03370' => 'ccan', 'Cc09_g10300' => 'ccan', 'Cc10_g03530' => 'ccan', 'Cc10_g11380' => 'ccan', 'CDE01G0176' => 'cde', 'CDE02G0675' => 'cde', 'CDE02G0942' => 'cde', 'CDE02G1153' => 'cde', 'CDE02G4177' => 'cde', 'CDE04G2117' => 'cde', 'CDE04G2736' => 'cde', 'CDE08G1161' => 'cde', 'CDE09G1238' => 'cde', 'Cfa000467' => 'cfa', 'Cfa000947' => 'cfa', 'Cfa004969' => 'cfa', 'Cfa005284' => 'cfa', 'Cfa008993' => 'cfa', 'Cfa018187' => 'cfa', 'Cfa018454' => 'cfa', 'Cfa020585' => 'cfa', 'Ciclev10000424m.g' => 'ccl', 'Ciclev10003605m.g' => 'ccl', 'Ciclev10007828m.g' => 'ccl', 'Ciclev10014620m.g' => 'ccl', 'Ciclev10015169m.g' => 'ccl', 'Ciclev10018291m.g' => 'ccl', 'Ciclev10028256m.g' => 'ccl', 'Ciclev10033822m.g' => 'ccl', 'CiPaw.05G060300' => 'cil', 'CiPaw.05G085000' => 'cil', 'CiPaw.06G083700' => 'cil', 'CiPaw.06G120300' => 'cil', 'CiPaw.09G060500' => 'cil', 'CiPaw.09G123800' => 'cil', 'CiPaw.11G169700' => 'cil', 'CiPaw.12G118300' => 'cil', 'CiPaw.15G071000' => 'cil', 'CiPaw.15G081900' => 'cil', 'ClCG01G024610' => 'cla', 'ClCG03G006070' => 'cla', 'ClCG05G019250' => 'cla', 'ClCG09G009500' => 'cla', 'ClCG11G008200' => 'cla', 'ClCG11G018080' => 'cla', 'COL.COLO4_17373' => 'col', 'COL.COLO4_22994' => 'col', 'COL.COLO4_26389' => 'col', 'COL.COLO4_27170' => 'col', 'COL.COLO4_31074' => 'col', 'COL.COLO4_31465' => 'col', 'COL.COLO4_36438' => 'col', 'COL.COLO4_36439' => 'col', 'Cpa.g.c38781' => 'cpa', 'Cpa.g.sc128.12' => 'cpa', 'Cpa.g.sc166.7' => 'cpa', 'Cpa.g.sc166.8' => 'cpa', 'Cpa.g.sc20.111' => 'cpa', 'Cpa.g.sc27.31' => 'cpa', 'Cpa.g.sc64.36' => 'cpa', 'Cpa.g.sc64.37' => 'cpa', 'Cpa.g.sc66.49' => 'cpa', 'Cpa.g.sc80.64' => 'cpa', 'CsaV3_1G012320' => 'csa', 'CsaV3_2G008480' => 'csa', 'CsaV3_2G033450' => 'csa', 'CsaV3_3G044830' => 'csa', 'CsaV3_4G033710' => 'csa', 'CsaV3_6G051730' => 'csa', 'CsaV3_7G025350' => 'csa', 'CSS0001067' => 'camsi', 'CSS0005996' => 'camsi', 'CSS0006590' => 'camsi', 'CSS0009673' => 'camsi', 'CSS0010201' => 'camsi', 'CSS0010549' => 'camsi', 'CSS0011364' => 'camsi', 'CSS0014473' => 'camsi', 'CSS0014961' => 'camsi', 'CSS0020191' => 'camsi', 'CSS0021165' => 'camsi', 'CSS0022306' => 'camsi', 'CSS0030591' => 'camsi', 'CSS0030696' => 'camsi', 'CSS0032653' => 'camsi', 'CSS0037487' => 'camsi', 'CSS0041102' => 'camsi', 'CSS0041261' => 'camsi', 'CSS0046246' => 'camsi', 'CSS0049256' => 'camsi', 'DCAR_004075' => 'dca', 'DCAR_011538' => 'dca', 'DCAR_019553' => 'dca', 'DCAR_020952' => 'dca', 'DCAR_021739' => 'dca', 'DCAR_027407' => 'dca', 'DCAR_027913' => 'dca', 'DCAR_028066' => 'dca', 'Dinv05899' => 'din', 'Dinv07563' => 'din', 'Dinv08010' => 'din', 'Dinv14125' => 'din', 'Dinv20172' => 'din', 'Dinv30743' => 'din', 'Dinv31229' => 'din', 'Dinv34162' => 'din', 'Dinv36028' => 'din', 'Dinv39368' => 'din', 'Dinv40565' => 'din', 'Dinv41706' => 'din', 'Duzib052G0089' => 'dzi', 'Duzib116G0641' => 'dzi', 'Duzib132G0069' => 'dzi', 'Duzib132G1219' => 'dzi', 'Duzib147G0278' => 'dzi', 'Duzib160G0480' => 'dzi', 'Duzib170G0661' => 'dzi', 'Duzib177G0591' => 'dzi', 'Duzib187G1353' => 'dzi', 'Duzib192G0858' => 'dzi', 'Duzib192G0883' => 'dzi', 'Duzib213G0506' => 'dzi', 'Duzib235G0289' => 'dzi', 'Duzib251G0422' => 'dzi', 'ECA232G3898' => 'eca', 'ECA233G5950' => 'eca', 'ECA234G1699' => 'eca', 'ECA234G2421' => 'eca', 'ECA236G0426' => 'eca', 'ECA236G4331' => 'eca', 'ECA248G2573' => 'eca', 'EL10Ac1g00077' => 'bvu', 'EL10Ac1g01746' => 'bvu', 'EL10Ac2g03464' => 'bvu', 'EL10Ac4g08176' => 'bvu', 'EL10Ac7g17521' => 'bvu', 'EL10Ac8g20386' => 'bvu', 'EL10Ac9g21343' => 'bvu', 'EL10Ac9g22688' => 'bvu', 'Eucgr.B03434' => 'egr', 'Eucgr.D00618' => 'egr', 'Eucgr.E02395' => 'egr', 'Eucgr.F01129' => 'egr', 'Eucgr.F02622' => 'egr', 'Eucgr.F04207' => 'egr', 'FAN01G0570' => 'fan', 'FAN03G3351' => 'fan', 'FAN06G3702' => 'fan', 'FAN07G2149' => 'fan', 'FAN10G3758' => 'fan', 'FAN11G1170' => 'fan', 'FAN11G2050' => 'fan', 'FAN11G2724' => 'fan', 'FAN12G1700' => 'fan', 'FAN12G2028' => 'fan', 'FAN15G1160' => 'fan', 'FAN15G3063' => 'fan', 'FAN16G2540' => 'fan', 'FAN16G3077' => 'fan', 'FAN16G3624' => 'fan', 'FAN17G0221' => 'fan', 'FAN20G2492' => 'fan', 'FAN20G2905' => 'fan', 'FAN21G0548' => 'fan', 'FAN21G1300' => 'fan', 'FAN22G0077' => 'fan', 'FAN22G1315' => 'fan', 'FAN24G1280' => 'fan', 'FAN24G1445' => 'fan', 'FAN24G3527' => 'fan', 'FAN25G0464' => 'fan', 'FAN25G2885' => 'fan', 'FAN25G3270' => 'fan', 'FAN27G1101' => 'fan', 'FAN27G2846' => 'fan', 'FAN27G3524' => 'fan', 'FvH4_2g11770' => 'fve', 'FvH4_2g15630' => 'fve', 'FvH4_3g05570' => 'fve', 'FvH4_3g09110' => 'fve', 'FvH4_3g19940' => 'fve', 'FvH4_4g04821' => 'fve', 'FvH4_4g31480' => 'fve', 'FvH4_7g01740' => 'fve', 'Glyma.05G130400' => 'gma', 'Glyma.05G156400' => 'gma', 'Glyma.07G197000' => 'gma', 'Glyma.08G085151' => 'gma', 'Glyma.08G114500' => 'gma', 'Glyma.08G300400' => 'gma', 'Glyma.10G215800' => 'gma', 'Glyma.12G224400' => 'gma', 'Glyma.13G179300' => 'gma', 'Glyma.13G218151' => 'gma', 'Glyma.13G238800' => 'gma', 'Glyma.13G276900' => 'gma', 'Glyma.14G078200' => 'gma', 'Glyma.15G074500' => 'gma', 'Glyma.15G094100' => 'gma', 'Glyma.17G247200' => 'gma', 'Glyma.18G120100' => 'gma', 'Glyma.20G176000' => 'gma', 'Gohir.A01G063600' => 'ghi', 'Gohir.A01G170301' => 'ghi', 'Gohir.A02G060500' => 'ghi', 'Gohir.A05G133850' => 'ghi', 'Gohir.A05G161400' => 'ghi', 'Gohir.A06G012900' => 'ghi', 'Gohir.A06G035901' => 'ghi', 'Gohir.A06G127100' => 'ghi', 'Gohir.A06G210500' => 'ghi', 'Gohir.A08G008650' => 'ghi', 'Gohir.A09G072700' => 'ghi', 'Gohir.A09G088301' => 'ghi', 'Gohir.A10G040600' => 'ghi', 'Gohir.A12G036300' => 'ghi', 'Gohir.A12G143350' => 'ghi', 'Gohir.A12G165500' => 'ghi', 'Gohir.A13G145700' => 'ghi', 'Gohir.D01G050000' => 'ghi', 'Gohir.D01G051366' => 'ghi', 'Gohir.D01G161350' => 'ghi', 'Gohir.D02G065900' => 'ghi', 'Gohir.D05G164200' => 'ghi', 'Gohir.D05G355500' => 'ghi', 'Gohir.D06G010400' => 'ghi', 'Gohir.D06G111250' => 'ghi', 'Gohir.D06G132000' => 'ghi', 'Gohir.D06G210500' => 'ghi', 'Gohir.D07G165675' => 'ghi', 'Gohir.D08G062240' => 'ghi', 'Gohir.D08G086101' => 'ghi', 'Gohir.D08G138060' => 'ghi', 'Gohir.D09G072300' => 'ghi', 'Gohir.D10G041400' => 'ghi', 'Gohir.D11G191020' => 'ghi', 'Gohir.D11G212066' => 'ghi', 'Gohir.D12G036300' => 'ghi', 'Gohir.D12G168600' => 'ghi', 'Gohir.D13G150600' => 'ghi', 'Gorai.001G057300' => 'gra', 'Gorai.002G069900' => 'gra', 'Gorai.002G200000' => 'gra', 'Gorai.003G067600' => 'gra', 'Gorai.005G074800' => 'gra', 'Gorai.006G087300' => 'gra', 'Gorai.008G037500' => 'gra', 'Gorai.008G181400' => 'gra', 'Gorai.009G169400' => 'gra', 'Gorai.009G387900' => 'gra', 'Gorai.010G013300' => 'gra', 'Gorai.010G153800' => 'gra', 'Gorai.010G255800' => 'gra', 'Gorai.011G043700' => 'gra', 'Gorai.011G198900' => 'gra', 'Gorai.013G168400' => 'gra', 'GSVIVG01005212001' => 'vvi', 'GSVIVG01006163001' => 'vvi', 'GSVIVG01009625001' => 'vvi', 'GSVIVG01014338001' => 'vvi', 'GSVIVG01020005001' => 'vvi', 'GSVIVG01021450001' => 'vvi', 'GSVIVG01023975001' => 'vvi', 'GSVIVG01034490001' => 'vvi', 'HanXRQChr04g0112071' => 'han', 'HanXRQChr05g0131151' => 'han', 'HanXRQChr09g0262371' => 'han', 'HanXRQChr09g0268401' => 'han', 'HanXRQChr10g0279241' => 'han', 'HanXRQChr10g0297961' => 'han', 'HanXRQChr11g0326231' => 'han', 'HanXRQChr11g0328471' => 'han', 'HanXRQChr16g0507941' => 'han', 'HanXRQChr17g0560211' => 'han', 'Haze_02108' => 'cav', 'Haze_02428' => 'cav', 'Haze_05593' => 'cav', 'Haze_06448' => 'cav', 'Haze_09427' => 'cav', 'Haze_12022' => 'cav', 'Haze_17612' => 'cav', 'Haze_17928' => 'cav', 'Hma1.2p1_0032F.1_g019250' => 'hma', 'Hma1.2p1_0163F.1_g072690' => 'hma', 'Hma1.2p1_0265F.1_g106710' => 'hma', 'Hma1.2p1_0286F.1_g113970' => 'hma', 'Hma1.2p1_0363F.1_g136640' => 'hma', 'Hma1.2p1_0584F.1_g183470' => 'hma', 'Hma1.2p1_0885F.1_g232570' => 'hma', 'HPP92_006022' => 'vpl', 'HPP92_007320' => 'vpl', 'HPP92_011521' => 'vpl', 'HPP92_019387' => 'vpl', 'HPP92_024038' => 'vpl', 'Hund05891' => 'sun', 'Hund06450' => 'sun', 'Hund12053' => 'sun', 'Hund16800' => 'sun', 'Hund21222' => 'sun', 'Hund22896' => 'sun', 'Hund23746' => 'sun', 'Hund27083' => 'sun', 'Lalb_Chr02g0141831' => 'lal', 'Lalb_Chr02g0141841' => 'lal', 'Lalb_Chr05g0220411' => 'lal', 'Lalb_Chr06g0162081' => 'lal', 'Lalb_Chr09g0327651' => 'lal', 'Lalb_Chr13g0295051' => 'lal', 'Lalb_Chr15g0086801' => 'lal', 'Lalb_Chr16g0383781' => 'lal', 'Lalb_Chr16g0383791' => 'lal', 'Lalb_Chr18g0055441' => 'lal', 'Lalb_Chr18g0059611' => 'lal', 'Lalb_Chr20g0109661' => 'lal', 'Lalb_Chr20g0109831' => 'lal', 'Lalb_Chr20g0121871' => 'lal', 'Lalb_Chr22g0355361' => 'lal', 'Lalb_Chr25g0286371' => 'lal', 'Lj1A1187G43' => 'lonja', 'Lj1A1205T50' => 'lonja', 'Lj1A800G33' => 'lonja', 'Lj1C1187T7' => 'lonja', 'Lj1C843T11' => 'lonja', 'Lj1g0010940' => 'lja', 'Lj2A288T69' => 'lonja', 'Lj3g0024276' => 'lja', 'Lj4A47T76' => 'lonja', 'Lj4g0005805' => 'lja', 'Lj4g0006097' => 'lja', 'Lj4g0008528' => 'lja', 'Lj4g0024907' => 'lja', 'Lj5g0012472' => 'lja', 'Lj5g0018648' => 'lja', 'Lj6C789G1' => 'lonja', 'Lj6g0004000' => 'lja', 'Lj7A292G67' => 'lonja', 'Lj7A292T64' => 'lonja', 'Lj9A400T58' => 'lonja', 'Lsat_1_v5_gn_1_126181' => 'lsa', 'Lsat_1_v5_gn_4_123041' => 'lsa', 'Lsat_1_v5_gn_4_133620' => 'lsa', 'Lsat_1_v5_gn_4_53221' => 'lsa', 'Lsat_1_v5_gn_4_71961' => 'lsa', 'Lsat_1_v5_gn_7_105241' => 'lsa', 'Lsat_1_v5_gn_7_21361' => 'lsa', 'Lsat_1_v5_gn_7_28860' => 'lsa', 'Lsat_1_v5_gn_7_31260' => 'lsa', 'Lsat_1_v5_gn_8_52801' => 'lsa', 'Manes.02G191400' => 'mes', 'Manes.03G110100' => 'mes', 'Manes.04G071100' => 'mes', 'Manes.05G100500' => 'mes', 'Manes.05G164700' => 'mes', 'Manes.15G087000' => 'mes', 'Manes.15G121500' => 'mes', 'Manes.16G028300' => 'mes', 'Manes.17G046100' => 'mes', 'Manes.17G069800' => 'mes', 'Manes.18G100500' => 'mes', 'Mapoly0002s0109' => 'mpo', 'Mapoly0024s0007' => 'mpo', 'Mapoly0089s0032' => 'mpo', 'MBI04_g42241_MAGBIO' => 'mbi', 'MBI05_g11988_MAGBIO' => 'mbi', 'MBI05_g35452_MAGBIO' => 'mbi', 'MBI07_g30179_MAGBIO' => 'mbi', 'MBI07_g35859_MAGBIO' => 'mbi', 'MBI07_g35860_MAGBIO' => 'mbi', 'MBI07_g37166_MAGBIO' => 'mbi', 'MBI08_g18172_MAGBIO' => 'mbi', 'MBI09_g08441_MAGBIO' => 'mbi', 'MBI13_g01676_MAGBIO' => 'mbi', 'MBI14_g42955_MAGBIO' => 'mbi', 'MBI16_g13161_MAGBIO' => 'mbi', 'MBI17_g27204_MAGBIO' => 'mbi', 'MBI19_g21595_MAGBIO' => 'mbi', 'MD00G1148400' => 'mdo', 'MD02G1301200' => 'mdo', 'MD03G1227800' => 'mdo', 'MD05G1041100' => 'mdo', 'MD05G1124800' => 'mdo', 'MD05G1284000' => 'mdo', 'MD05G1338800' => 'mdo', 'MD05G1338900' => 'mdo', 'MD07G1022800' => 'mdo', 'MD10G1047500' => 'mdo', 'MD10G1127500' => 'mdo', 'MD10G1262300' => 'mdo', 'MD10G1293800' => 'mdo', 'MD16G1074300' => 'mdo', 'Medtr1g021670' => 'mtr', 'Medtr1g096320' => 'mtr', 'Medtr2g013690' => 'mtr', 'Medtr2g019450' => 'mtr', 'Medtr2g085170' => 'mtr', 'Medtr4g088785' => 'mtr', 'Medtr8g055930' => 'mtr', 'Medtr8g085850' => 'mtr', 'MELO3C002605.2' => 'cme', 'MELO3C003891.2' => 'cme', 'MELO3C004012.2' => 'cme', 'MELO3C007134.2' => 'cme', 'MELO3C008118.2' => 'cme', 'MELO3C016700.2' => 'cme', 'MELO3C024127.2' => 'cme', 'MELO3C033361.2' => 'cme', 'MELO3C033362.2' => 'cme', 'Migut.C00430' => 'egut', 'Migut.C01246' => 'egut', 'Migut.E00101' => 'egut', 'Migut.H01486' => 'egut', 'Migut.H01939' => 'egut', 'Migut.K00360' => 'egut', 'Migut.M00910' => 'egut', 'Migut.M01139' => 'egut', 'Migut.N02677' => 'egut', 'MSTRG.13252' => 'ama', 'MSTRG.14701' => 'ama', 'MSTRG.1521' => 'ama', 'MSTRG.15884' => 'ama', 'MSTRG.16242' => 'ama', 'MSTRG.22285' => 'ama', 'MSTRG.22444' => 'ama', 'MSTRG.2349' => 'ama', 'MSTRG.26308' => 'ama', 'MSTRG.28296' => 'ama', 'MSTRG.9895' => 'ama', 'Nitab4.5_0000110g0060' => 'nta', 'Nitab4.5_0000420g0130' => 'nta', 'Nitab4.5_0000422g0030' => 'nta', 'Nitab4.5_0000560g0180' => 'nta', 'Nitab4.5_0000703g0100' => 'nta', 'Nitab4.5_0000786g0200' => 'nta', 'Nitab4.5_0001336g0020' => 'nta', 'Nitab4.5_0001796g0030' => 'nta', 'Nitab4.5_0003348g0060' => 'nta', 'Nitab4.5_0003698g0040' => 'nta', 'Nitab4.5_0003942g0090' => 'nta', 'Nitab4.5_0004775g0070' => 'nta', 'Nitab4.5_0004864g0030' => 'nta', 'Nitab4.5_0005615g0020' => 'nta', 'Nitab4.5_0009288g0030' => 'nta', 'Nitab4.5_0009341g0010' => 'nta', 'Nitab4.5_0009535g0010' => 'nta', 'Nn1g03995' => 'nnu', 'Nn1g04100' => 'nnu', 'Nn1g06530' => 'nnu', 'Nn3g16404' => 'nnu', 'Nn3g17212' => 'nnu', 'Nn3g20776' => 'nnu', 'Nn3g21923' => 'nnu', 'Nn5g27737' => 'nnu', 'Nn5g29461' => 'nnu', 'Nn7g38355' => 'nnu', 'Nn8g39873' => 'nnu', 'Oeu000548.2' => 'oeu', 'Oeu004672.1' => 'oeu', 'Oeu015605.2' => 'oeu', 'Oeu016092.1' => 'oeu', 'Oeu017879.3' => 'oeu', 'Oeu024910.1' => 'oeu', 'Oeu028965.1' => 'oeu', 'Oeu031269.1' => 'oeu', 'Oeu031270.1' => 'oeu', 'Oeu032535.1' => 'oeu', 'Oeu034151.1' => 'oeu', 'Oeu034152.1' => 'oeu', 'Oeu034588.2' => 'oeu', 'Oeu050846.1' => 'oeu', 'Oeu050849.2' => 'oeu', 'Oeu051063.2' => 'oeu', 'Oeu052368.1' => 'oeu', 'Oeu052370.1' => 'oeu', 'Os01g0210400' => 'osa', 'Os01g0304300' => 'osa', 'Os01g0749100' => 'osa', 'Os02g0745800' => 'osa', 'Os03g0769050' => 'osa', 'Os05g0531500' => 'osa', 'Os06g0724300' => 'osa', 'Os11g0198100' => 'osa', 'Peaxi162Scf00069g01425' => 'pax', 'Peaxi162Scf00280g00811' => 'pax', 'Peaxi162Scf00310g00615' => 'pax', 'Peaxi162Scf00362g00542' => 'pax', 'Peaxi162Scf00461g00310' => 'pax', 'Peaxi162Scf00530g00118' => 'pax', 'Peaxi162Scf00541g00057' => 'pax', 'Peaxi162Scf00661g00017' => 'pax', 'Peaxi162Scf00926g00027' => 'pax', 'Peaxi162Scf01064g00263' => 'pax', 'Peaxi162Scf01211g00135' => 'pax', 'PGR004G2336' => 'pgr', 'PGR042G0327' => 'pgr', 'PGR042G1957' => 'pgr', 'PGR042G2003' => 'pgr', 'PGR042G3929' => 'pgr', 'PGR083G1137' => 'pgr', 'PGR083G1364' => 'pgr', 'PGSC0003DMG400003381' => 'stu', 'PGSC0003DMG400003417' => 'stu', 'PGSC0003DMG400008981' => 'stu', 'PGSC0003DMG400012417' => 'stu', 'PGSC0003DMG400012823' => 'stu', 'PGSC0003DMG400016885' => 'stu', 'PGSC0003DMG400022812' => 'stu', 'PGSC0003DMG400029726' => 'stu', 'PGSC0003DMG401009243' => 'stu', 'PGSC0003DMG401031505' => 'stu', 'PGSC0003DMG402031505' => 'stu', 'Phvul.001G017600' => 'pvu', 'Phvul.002G193500' => 'pvu', 'Phvul.002G228900' => 'pvu', 'Phvul.002G236800' => 'pvu', 'Phvul.003G049500' => 'pvu', 'Phvul.005G072000' => 'pvu', 'Phvul.006G164800' => 'pvu', 'Phvul.006G185100' => 'pvu', 'Phvul.007G090000' => 'pvu', 'Potri.001G399800' => 'ptr', 'Potri.002G149900' => 'ptr', 'Potri.004G044100' => 'ptr', 'Potri.004G177600' => 'ptr', 'Potri.009G138000' => 'ptr', 'Potri.010G094000' => 'ptr', 'Potri.011G053000' => 'ptr', 'Potri.011G119300' => 'ptr', 'Potri.013G113700' => 'ptr', 'Potri.018G107800' => 'ptr', 'Potri.019G084100' => 'ptr', 'Pp3c14_23720' => 'ppa', 'Pp3c16_6340' => 'ppa', 'Pp3c23_13420' => 'ppa', 'Pp3c24_2740' => 'ppa', 'Pp3c25_860' => 'ppa', 'Pp3c8_21750' => 'ppa', 'Prupe.1G273000' => 'ppe', 'Prupe.1G273700' => 'ppe', 'Prupe.1G274100' => 'ppe', 'Prupe.2G023300' => 'ppe', 'Prupe.4G048000' => 'ppe', 'Prupe.4G080400' => 'ppe', 'Prupe.4G181200' => 'ppe', 'Prupe.8G056900' => 'ppe', 'Prupe.8G168700' => 'ppe', 'Psat1g189080' => 'psa', 'Psat1g204760' => 'psa', 'Psat4g175560' => 'psa', 'Psat4g177720' => 'psa', 'Psat5g244240' => 'psa', 'Psat6g010720' => 'psa', 'Psat6g187200' => 'psa', 'Psat7g072040' => 'psa', 'PSO017G3501' => 'pso', 'PSO063G2148' => 'pso', 'PSO063G5608' => 'pso', 'PSO210G6392' => 'pso', 'PSO541G2319' => 'pso', 'PSO541G2836' => 'pso', 'PSO541G4012' => 'pso', 'PSO541G6253' => 'pso', 'PSO675G0580' => 'pso', 'PSO675G0856' => 'pso', 'PSO675G5635' => 'pso', 'PSO675G9157' => 'pso', 'PSO832G1660' => 'pso', 'PSO832G1969' => 'pso', 'QL02p007186' => 'qlo', 'QL02p033904' => 'qlo', 'QL03p064391' => 'qlo', 'QL05p040593' => 'qlo', 'QL05p058242' => 'qlo', 'QL08p021825' => 'qlo', 'QL11p004981' => 'qlo', 'RcHm_v2.0_Chr1g0318301' => 'rch', 'RcHm_v2.0_Chr4g0418501' => 'rch', 'RcHm_v2.0_Chr4g0439971' => 'rch', 'RcHm_v2.0_Chr5g0008541' => 'rch', 'RcHm_v2.0_Chr5g0014101' => 'rch', 'RcHm_v2.0_Chr5g0014131' => 'rch', 'RcHm_v2.0_Chr5g0033621' => 'rch', 'RcHm_v2.0_Chr6g0272041' => 'rch', 'RcHm_v2.0_Chr6g0278831' => 'rch', 'Rhsim02G0130400' => 'rsi', 'Rhsim02G0171100' => 'rsi', 'Rhsim05G0053000' => 'rsi', 'Rhsim05G0053100' => 'rsi', 'Rhsim06G0096500' => 'rsi', 'Rhsim06G0096600' => 'rsi', 'Rhsim06G0199100' => 'rsi', 'Rhsim12G0062300' => 'rsi', 'Rhsim12G0062800' => 'rsi', 'Sabra02G0118600' => 'sbr', 'Sabra04G0027300' => 'sbr', 'Sabra04G0119500' => 'sbr', 'Sabra08G0112500' => 'sbr', 'Sabra11G0036800' => 'sbr', 'Sabra11G0103800' => 'sbr', 'Sabra13G0096300' => 'sbr', 'Sabra16G0262300' => 'sbr', 'Sabra18G0091700' => 'sbr', 'Sabra19G0095400' => 'sbr', 'SalBow6G3080' => 'sbo', 'SalBow7G1157' => 'sbo', 'SalBow7G2123' => 'sbo', 'SalBow7G2285' => 'sbo', 'SalBow7G3537' => 'sbo', 'SalBow8G2947' => 'sbo', 'SalBow8G4463' => 'sbo', 'SalBow8G5466' => 'sbo', 'Sc01g0001750' => 'sci', 'Sc02g0006640' => 'sci', 'Sc02g0006670' => 'sci', 'Sc04g0008220' => 'sci', 'Sc05g0006190' => 'sci', 'Sc08g0002760' => 'sci', 'Sc17g0006170' => 'sci', 'Sc22g0002050' => 'sci', 'Sc23g0001190' => 'sci', 'Sc24g0000980' => 'sci', 'Sed0006245' => 'sed', 'Sed0007543' => 'sed', 'Sed0009411' => 'sed', 'Sed0010765' => 'sed', 'Sed0012944' => 'sed', 'Sed0014682' => 'sed', 'Sed0016174' => 'sed', 'Sed0016796' => 'sed', 'Sed0020317' => 'sed', 'Sed0021467' => 'sed', 'SEGI_01316' => 'sgi', 'SEGI_03374' => 'sgi', 'SEGI_16265' => 'sgi', 'SEGI_18569' => 'sgi', 'SEGI_20351' => 'sgi', 'SEGI_26395' => 'sgi', 'SEGI_29469' => 'sgi', 'SEGI_34771' => 'sgi', 'SEGI_36769' => 'sgi', 'SEGI_37139' => 'sgi', 'SGA_v2.0_scaffold100G29687' => 'sas', 'SGA_v2.0_scaffold118G32472' => 'sas', 'SGA_v2.0_scaffold14G07051' => 'sas', 'SGA_v2.0_scaffold183G39845' => 'sas', 'SGA_v2.0_scaffold1G00174' => 'sas', 'SGA_v2.0_scaffold22G09714' => 'sas', 'SGA_v2.0_scaffold333G48992' => 'sas', 'SGA_v2.0_scaffold46G17491' => 'sas', 'SGA_v2.0_scaffold49G18294' => 'sas', 'SGA_v2.0_scaffold63G21658' => 'sas', 'SHI01741' => 'shi', 'SHI05771' => 'shi', 'SHI18077' => 'shi', 'SHI20525' => 'shi', 'SHI20527' => 'shi', 'SHI20528' => 'shi', 'SMO172G0185' => 'smo', 'SMO198G0020' => 'smo', 'SMO351G0006' => 'smo', 'SMO356G0118' => 'smo', 'SMO358G0296' => 'smo', 'SMO367G0079' => 'smo', 'SMO367G1277' => 'smo', 'Solyc01g014220.3' => 'sly', 'Solyc01g111770.2' => 'sly', 'Solyc02g078180.3' => 'sly', 'Solyc03g006430.3' => 'sly', 'Solyc03g006456.1' => 'sly', 'Solyc03g079860.2' => 'sly', 'Solyc04g079770.3' => 'sly', 'Solyc05g007430.4' => 'sly', 'Solyc07g063150.3' => 'sly', 'Solyc08g016620.3' => 'sly', 'Solyc09g057590.3' => 'sly', 'Solyc09g057600.1' => 'sly', 'Solyc10g009050.3' => 'sly', 'Solyc11g017420.2' => 'sly', 'Sopen01g053810' => 'spe', 'Sopen02g023040' => 'spe', 'Sopen03g002440' => 'spe', 'Sopen04g033350' => 'spe', 'Sopen05g003310' => 'spe', 'Sopen07g004050' => 'spe', 'Sopen07g031340' => 'spe', 'Sopen08g006990' => 'spe', 'Sopen10g004830' => 'spe', 'Sopen11g009370' => 'spe', 'Sp1g24450' => 'spa', 'Sp1g29670' => 'spa', 'Sp1g39600' => 'spa', 'Sp2g11080' => 'spa', 'Sp2g13970' => 'spa', 'Sp4g16130' => 'spa', 'Sp6g13080' => 'spa', 'Sp7g37270' => 'spa', 'TAR371G0065' => 'tar', 'TAR376G0340' => 'tar', 'TAR376G0435' => 'tar', 'TAR381G0002' => 'tar', 'TAR381G1236' => 'tar', 'TAR624G0055' => 'tar', 'TAR624G0324' => 'tar', 'TAR624G0696' => 'tar', 'TAR624G0906' => 'tar', 'TAR625G0107' => 'tar', 'TAR626G0015' => 'tar', 'TAR626G1356' => 'tar', 'TAR627G0888' => 'tar', 'TAR628G0399' => 'tar', 'TAR628G1327' => 'tar', 'TAR629G2831' => 'tar', 'TAR629G2874' => 'tar', 'TAR633G1432' => 'tar', 'TAR633G2771' => 'tar', 'THA.LOC104803394' => 'tha', 'THA.LOC104805153' => 'tha', 'THA.LOC104806784' => 'tha', 'THA.LOC104810473' => 'tha', 'THA.LOC104813100' => 'tha', 'THA.LOC104814215' => 'tha', 'THA.LOC104815554' => 'tha', 'THA.LOC104820544' => 'tha', 'THA.LOC104824754' => 'tha', 'THA.LOC104827717' => 'tha', 'Thecc.02G031400' => 'tca', 'Thecc.02G055900' => 'tca', 'Thecc.02G350800' => 'tca', 'Thecc.06G150900' => 'tca', 'Thecc.06G186600' => 'tca', 'Thecc.07G089600' => 'tca', 'Thecc.08G020400' => 'tca', 'Thecc.08G182100' => 'tca', 'Thhalv10000873m.g' => 'esa', 'Thhalv10004185m.g' => 'esa', 'Thhalv10006981m.g' => 'esa', 'Thhalv10007204m.g' => 'esa', 'Thhalv10011374m.g' => 'esa', 'Thhalv10013482m.g' => 'esa', 'Thhalv10017801m.g' => 'esa', 'Thhalv10024983m.g' => 'esa', 'TPR.G12072' => 'tpr', 'TPR.G15769' => 'tpr', 'TPR.G16504' => 'tpr', 'TPR.G16506' => 'tpr', 'TPR.G24345' => 'tpr', 'TPR.G26666' => 'tpr', 'TPR.G27320' => 'tpr', 'TPR.G31819' => 'tpr', 'TPR.G38879' => 'tpr', 'TPR.G39015' => 'tpr', 'TPR.G8819' => 'tpr', 'TWI09G0924' => 'twi', 'TWI12G0811' => 'twi', 'TWI12G1294' => 'twi', 'TWI31G0150' => 'twi', 'TWI36G1262' => 'twi', 'TWI38G1287' => 'twi', 'TWI38G1633' => 'twi', 'TWI38G1982' => 'twi', 'TWI39G0116' => 'twi', 'TWI60G1011' => 'twi', 'TWI63G0171' => 'twi', 'TWI73G0839' => 'twi', 'TWI79G1511' => 'twi', 'unitig_0.g915' => 'ugi', 'unitig_0.g916' => 'ugi', 'unitig_21.g20219' => 'ugi', 'unitig_21.g20416' => 'ugi', 'unitig_578.g16132' => 'ugi', 'unitig_578.g16718' => 'ugi', 'unitig_62.g23481' => 'ugi', 'unitig_744.g24535' => 'ugi', 'unitig_749.g13525' => 'ugi', 'vmacro01248' => 'vma', 'vmacro02290' => 'vma', 'vmacro10946' => 'vma', 'vmacro11865' => 'vma', 'vmacro12493' => 'vma', 'vmacro17322' => 'vma', 'vmacro21599' => 'vma', 'vmacro23041' => 'vma', 'VMungo0251G0004' => 'vmu', 'VMungo0251G2639' => 'vmu', 'VMungo0251G2967' => 'vmu', 'VMungo0540G0864' => 'vmu', 'VMungo0540G1569' => 'vmu', 'VMungo0647G0317' => 'vmu', 'VMungo0720G1373' => 'vmu', 'VMungo0720G1508' => 'vmu', 'VMungo1080G0485' => 'vmu', 'VMungo1215G3177' => 'vmu', 'Zm00001eb112600' => 'zma', 'Zm00001eb120220' => 'zma', 'Zm00001eb153240' => 'zma', 'Zm00001eb168880' => 'zma', 'Zm00001eb213920' => 'zma', 'Zm00001eb228280' => 'zma', 'Zm00001eb254580' => 'zma', 'Zm00001eb272180' => 'zma', 'Zm00001eb293190' => 'zma', 'Zm00001eb322930' => 'zma', 'Zm00001eb353360' => 'zma', 'Zm00001eb353390' => 'zma', 'Zm00001eb353430' => 'zma', 'Zm00001eb353440' => 'zma', 'Zm00001eb353780' => 'zma' ), 'gf_id' => 'HOM05D000499', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000499' ), 'data_identifier' => 'HOM05D000499', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000499', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1066', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p29780' => 'bna', 'A02p33180' => 'bna', 'A03p16470' => 'bna', 'A03p66010' => 'bna', 'A04p25970' => 'bna', 'A06p01270' => 'bna', 'A06p46080' => 'bna', 'A07p11400' => 'bna', 'A08p01840' => 'bna', 'A08p08230' => 'bna', 'A08p25740' => 'bna', 'A09p32070' => 'bna', 'A09p37830' => 'bna', 'A09p42840' => 'bna', 'A09p42850' => 'bna', 'Aa31LG10G2060' => 'aar', 'Aa31LG2G7410' => 'aar', 'Aa31LG6G10200' => 'aar', 'Aa31LG6G16680' => 'aar', 'Aa31LG6G8470' => 'aar', 'Aa31LG9G12730' => 'aar', 'Aa31LG9G13680' => 'aar', 'Aa31LG9G14920' => 'aar', 'Aa31LG9G6650' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4977' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5467' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3254' => 'aag', 'Actinidia02578' => 'ach', 'Actinidia07693' => 'ach', 'Actinidia08413' => 'ach', 'Actinidia08414' => 'ach', 'Actinidia15289' => 'ach', 'Actinidia19871' => 'ach', 'Actinidia21475' => 'ach', 'Actinidia22576' => 'ach', 'Actinidia28327' => 'ach', 'Actinidia32491' => 'ach', 'Actinidia39463' => 'ach', 'Actinidia39571' => 'ach', 'Ah.01g013750' => 'amhyb', 'Ah.01g023210' => 'amhyb', 'Ah.04g164850' => 'amhyb', 'Ah.05g178060' => 'amhyb', 'Ah.07g204270' => 'amhyb', 'Ah.07g208480' => 'amhyb', 'Ah.09g237410' => 'amhyb', 'Ah.14g089460' => 'amhyb', 'AL1G41790' => 'aly', 'AL1G49050' => 'aly', 'AL1G53810' => 'aly', 'AL1G61400' => 'aly', 'AL4G18580' => 'aly', 'AL5G12510' => 'aly', 'AL5G12540' => 'aly', 'AL6G43230' => 'aly', 'AL7G10370' => 'aly', 'AL7G19250' => 'aly', 'AL8G12240' => 'aly', 'AL8G18540' => 'aly', 'Aqoxy1G02409' => 'aox', 'Aqoxy2G03993' => 'aox', 'Aqoxy3G03357' => 'aox', 'Aqoxy4G00785' => 'aox', 'Aqoxy5G02598' => 'aox', 'Aqoxy6G00132' => 'aox', 'Aqoxy7G01776' => 'aox', 'Aqoxy7G02316' => 'aox', 'Aqoxy7G03973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.12AFKW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B8730' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27IQR1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3F75VG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3RE0GA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41TCQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.527VTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FIR39' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5W8UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DA38EV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ63HS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H1I32C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HC27T5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4M8AP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7N3CZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9UVDZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LS1NQA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT1D4B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SKC4TM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCFV76' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF9Q1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQWD9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1ZM88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WE07RT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YCK7VH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJE6Q6' => 'arhy', 'AT1G28240' => 'ath', 'AT1G34550' => 'ath', 'AT1G53040' => 'ath', 'AT2G02910' => 'ath', 'AT4G09630' => 'ath', 'AT4G38500' => 'ath', 'AT5G42660' => 'ath', 'AT5G46220' => 'ath', 'ATR0152G026' => 'atr', 'ATR0564G343' => 'atr', 'ATR0706G151' => 'atr', 'ATR0733G207' => 'atr', 'ATR0751G234' => 'atr', 'ATR0807G048' => 'atr', 'ATR1091G084' => 'atr', 'Atru.chr10.1229' => 'acertr', 'Atru.chr10.1230' => 'acertr', 'Atru.chr10.1874' => 'acertr', 'Atru.chr11.1808' => 'acertr', 'Atru.chr13.1795' => 'acertr', 'Atru.chr13.570' => 'acertr', 'Atru.chr2.2608' => 'acertr', 'Atru.chr2.2609' => 'acertr', 'Atru.chr5.3428' => 'acertr', 'Atru.chr8.1171' => 'acertr', 'AUR62004651' => 'cqu', 'AUR62008675' => 'cqu', 'AUR62010014' => 'cqu', 'AUR62013004' => 'cqu', 'AUR62014825' => 'cqu', 'AUR62015015' => 'cqu', 'AUR62015151' => 'cqu', 'AUR62017020' => 'cqu', 'AUR62019422' => 'cqu', 'AUR62023570' => 'cqu', 'AUR62025571' => 'cqu', 'AUR62029098' => 'cqu', 'AUR62033863' => 'cqu', 'AUR62034296' => 'cqu', 'AUR62040075' => 'cqu', 'BcaB02g07334' => 'bca', 'BcaB02g10575' => 'bca', 'BcaB03g12119' => 'bca', 'BcaB03g12120' => 'bca', 'BcaB03g13945' => 'bca', 'BcaB04g17123' => 'bca', 'BcaB04g17867' => 'bca', 'BcaB04g19839' => 'bca', 'BcaB07g30317' => 'bca', 'BcaB07g32432' => 'bca', 'BcaB07g33362' => 'bca', 'BcaB08g36611' => 'bca', 'BcaC01g00028' => 'bca', 'BcaC01g01356' => 'bca', 'BcaC01g02034' => 'bca', 'BcaC01g06051' => 'bca', 'BcaC03g16839' => 'bca', 'BcaC03g17176' => 'bca', 'BcaC05g26829' => 'bca', 'BcaC06g31490' => 'bca', 'BcaC06g35344' => 'bca', 'BcaC06g36570' => 'bca', 'BcaC07g37537' => 'bca', 'BcaC08g43491' => 'bca', 'BcaC08g43773' => 'bca', 'BcaNung00234' => 'bca', 'BcaNung01982' => 'bca', 'BcaNung03707' => 'bca', 'BcaNung06454' => 'bca', 'BolC2t10762H' => 'bol', 'BolC2t11191H' => 'bol', 'BolC3t14322H' => 'bol', 'BolC3t19747H' => 'bol', 'BolC3t21425H' => 'bol', 'BolC4t27800H' => 'bol', 'BolC5t31423H' => 'bol', 'BolC6t35951H' => 'bol', 'BolC6t36282H' => 'bol', 'BolC7t40678H' => 'bol', 'BolC7t40679H' => 'bol', 'BolC7t42222H' => 'bol', 'BolC7t43492H' => 'bol', 'BolC7t46785H' => 'bol', 'BolC8t47853H' => 'bol', 'BolC9t56805H' => 'bol', 'BraA02t08000Z' => 'bra', 'BraA02t08341Z' => 'bra', 'BraA03t10936Z' => 'bra', 'BraA03t15657Z' => 'bra', 'BraA04t18100Z' => 'bra', 'BraA05t20523Z' => 'bra', 'BraA06t23353Z' => 'bra', 'BraA06t27473Z' => 'bra', 'BraA06t27769Z' => 'bra', 'BraA07t28928Z' => 'bra', 'BraA08t32236Z' => 'bra', 'BraA08t32841Z' => 'bra', 'BraA08t34524Z' => 'bra', 'BraA09t38742Z' => 'bra', 'BraA09t39295Z' => 'bra', 'C02p47180' => 'bna', 'C02p50990' => 'bna', 'C03p19360' => 'bna', 'C03p74950' => 'bna', 'C03p91000' => 'bna', 'C04p63260' => 'bna', 'C05p27050' => 'bna', 'C06p08750' => 'bna', 'C06p11490' => 'bna', 'C07p02820' => 'bna', 'C07p17180' => 'bna', 'C07p29440' => 'bna', 'C07p63730' => 'bna', 'C09p39260' => 'bna', 'CAN.G1164.34' => 'can', 'CAN.G1164.39' => 'can', 'CAN.G1530.3' => 'can', 'CAN.G162.61' => 'can', 'CAN.G176.6' => 'can', 'CAN.G289.49' => 'can', 'CAN.G370.21' => 'can', 'CAN.G370.22' => 'can', 'CAN.G371.117' => 'can', 'CAN.G58.37' => 'can', 'CAN.G588.98' => 'can', 'CANSAT21G2266' => 'cansat', 'CANSAT25G2799' => 'cansat', 'CANSAT35G0862' => 'cansat', 'CANSAT35G1704' => 'cansat', 'CANSAT35G1760' => 'cansat', 'CANSAT56G3971' => 'cansat', 'CANSAT56G4116' => 'cansat', 'CANSAT80G1259' => 'cansat', 'CARHR027730' => 'chi', 'CARHR033880' => 'chi', 'CARHR043270' => 'chi', 'CARHR145330' => 'chi', 'CARHR145340' => 'chi', 'CARHR175570' => 'chi', 'CARHR181570' => 'chi', 'CARHR258470' => 'chi', 'CARHR260490' => 'chi', 'CARHR294220' => 'chi', 'Carub.0001s2668' => 'cru', 'Carub.0001s3257' => 'cru', 'Carub.0001s4220' => 'cru', 'Carub.0005s0179' => 'cru', 'Carub.0006s2807' => 'cru', 'Carub.0007s0039' => 'cru', 'Carub.0008s0169' => 'cru', 'Carub.0008s0636' => 'cru', 'Ca_00338_v3' => 'car', 'Ca_00542_v3' => 'car', 'Ca_01844_v3' => 'car', 'Ca_10611_v3' => 'car', 'Ca_13326_v3' => 'car', 'Ca_17944_v3' => 'car', 'Ca_18546_v3' => 'car', 'Ca_24219_v3' => 'car', 'Ca_29972_v3' => 'car', 'CBR_g3681' => 'cbr', 'CBR_g40021' => 'cbr', 'Cc01_g08140' => 'ccan', 'Cc02_g13410' => 'ccan', 'Cc02_g37480' => 'ccan', 'Cc05_g12030' => 'ccan', 'Cc09_g03370' => 'ccan', 'Cc09_g10300' => 'ccan', 'Cc10_g03530' => 'ccan', 'Cc10_g11380' => 'ccan', 'CDE01G0176' => 'cde', 'CDE02G0675' => 'cde', 'CDE02G0942' => 'cde', 'CDE02G1153' => 'cde', 'CDE02G4177' => 'cde', 'CDE04G2117' => 'cde', 'CDE04G2736' => 'cde', 'CDE08G1161' => 'cde', 'CDE09G1238' => 'cde', 'Cfa000467' => 'cfa', 'Cfa000947' => 'cfa', 'Cfa004969' => 'cfa', 'Cfa005284' => 'cfa', 'Cfa008993' => 'cfa', 'Cfa018187' => 'cfa', 'Cfa018454' => 'cfa', 'Cfa020585' => 'cfa', 'Ciclev10000424m.g' => 'ccl', 'Ciclev10003605m.g' => 'ccl', 'Ciclev10007828m.g' => 'ccl', 'Ciclev10014620m.g' => 'ccl', 'Ciclev10015169m.g' => 'ccl', 'Ciclev10018291m.g' => 'ccl', 'Ciclev10028256m.g' => 'ccl', 'Ciclev10033822m.g' => 'ccl', 'CiPaw.05G060300' => 'cil', 'CiPaw.05G085000' => 'cil', 'CiPaw.06G083700' => 'cil', 'CiPaw.06G120300' => 'cil', 'CiPaw.09G060500' => 'cil', 'CiPaw.09G123800' => 'cil', 'CiPaw.11G169700' => 'cil', 'CiPaw.12G118300' => 'cil', 'CiPaw.15G071000' => 'cil', 'CiPaw.15G081900' => 'cil', 'ClCG01G024610' => 'cla', 'ClCG03G006070' => 'cla', 'ClCG05G019250' => 'cla', 'ClCG09G009500' => 'cla', 'ClCG11G008200' => 'cla', 'ClCG11G018080' => 'cla', 'COL.COLO4_17373' => 'col', 'COL.COLO4_22994' => 'col', 'COL.COLO4_26389' => 'col', 'COL.COLO4_27170' => 'col', 'COL.COLO4_31074' => 'col', 'COL.COLO4_31465' => 'col', 'COL.COLO4_36438' => 'col', 'COL.COLO4_36439' => 'col', 'Cpa.g.c38781' => 'cpa', 'Cpa.g.sc128.12' => 'cpa', 'Cpa.g.sc166.7' => 'cpa', 'Cpa.g.sc166.8' => 'cpa', 'Cpa.g.sc20.111' => 'cpa', 'Cpa.g.sc27.31' => 'cpa', 'Cpa.g.sc64.36' => 'cpa', 'Cpa.g.sc64.37' => 'cpa', 'Cpa.g.sc66.49' => 'cpa', 'Cpa.g.sc80.64' => 'cpa', 'CsaV3_1G012320' => 'csa', 'CsaV3_2G008480' => 'csa', 'CsaV3_2G033450' => 'csa', 'CsaV3_3G044830' => 'csa', 'CsaV3_4G033710' => 'csa', 'CsaV3_6G051730' => 'csa', 'CsaV3_7G025350' => 'csa', 'CSS0001067' => 'camsi', 'CSS0005996' => 'camsi', 'CSS0006590' => 'camsi', 'CSS0009673' => 'camsi', 'CSS0010201' => 'camsi', 'CSS0010549' => 'camsi', 'CSS0011364' => 'camsi', 'CSS0014473' => 'camsi', 'CSS0014961' => 'camsi', 'CSS0020191' => 'camsi', 'CSS0021165' => 'camsi', 'CSS0022306' => 'camsi', 'CSS0030591' => 'camsi', 'CSS0030696' => 'camsi', 'CSS0032653' => 'camsi', 'CSS0037487' => 'camsi', 'CSS0041102' => 'camsi', 'CSS0041261' => 'camsi', 'CSS0046246' => 'camsi', 'CSS0049256' => 'camsi', 'DCAR_004075' => 'dca', 'DCAR_011538' => 'dca', 'DCAR_019553' => 'dca', 'DCAR_020952' => 'dca', 'DCAR_021739' => 'dca', 'DCAR_027407' => 'dca', 'DCAR_027913' => 'dca', 'DCAR_028066' => 'dca', 'Dinv05899' => 'din', 'Dinv07563' => 'din', 'Dinv08010' => 'din', 'Dinv14125' => 'din', 'Dinv20172' => 'din', 'Dinv30743' => 'din', 'Dinv31229' => 'din', 'Dinv34162' => 'din', 'Dinv36028' => 'din', 'Dinv39368' => 'din', 'Dinv40565' => 'din', 'Dinv41706' => 'din', 'Duzib052G0089' => 'dzi', 'Duzib116G0641' => 'dzi', 'Duzib132G0069' => 'dzi', 'Duzib132G1219' => 'dzi', 'Duzib147G0278' => 'dzi', 'Duzib160G0480' => 'dzi', 'Duzib170G0661' => 'dzi', 'Duzib177G0591' => 'dzi', 'Duzib187G1353' => 'dzi', 'Duzib192G0858' => 'dzi', 'Duzib192G0883' => 'dzi', 'Duzib213G0506' => 'dzi', 'Duzib235G0289' => 'dzi', 'Duzib251G0422' => 'dzi', 'ECA232G3898' => 'eca', 'ECA233G5950' => 'eca', 'ECA234G1699' => 'eca', 'ECA234G2421' => 'eca', 'ECA236G0426' => 'eca', 'ECA236G4331' => 'eca', 'ECA248G2573' => 'eca', 'EL10Ac1g00077' => 'bvu', 'EL10Ac1g01746' => 'bvu', 'EL10Ac2g03464' => 'bvu', 'EL10Ac4g08176' => 'bvu', 'EL10Ac7g17521' => 'bvu', 'EL10Ac8g20386' => 'bvu', 'EL10Ac9g21343' => 'bvu', 'EL10Ac9g22688' => 'bvu', 'Eucgr.B03434' => 'egr', 'Eucgr.D00618' => 'egr', 'Eucgr.E02395' => 'egr', 'Eucgr.F01129' => 'egr', 'Eucgr.F02622' => 'egr', 'Eucgr.F04207' => 'egr', 'FAN01G0570' => 'fan', 'FAN03G3351' => 'fan', 'FAN06G3702' => 'fan', 'FAN07G2149' => 'fan', 'FAN10G3758' => 'fan', 'FAN11G1170' => 'fan', 'FAN11G2050' => 'fan', 'FAN11G2724' => 'fan', 'FAN12G1700' => 'fan', 'FAN12G2028' => 'fan', 'FAN15G1160' => 'fan', 'FAN15G3063' => 'fan', 'FAN16G2540' => 'fan', 'FAN16G3077' => 'fan', 'FAN16G3624' => 'fan', 'FAN17G0221' => 'fan', 'FAN20G2492' => 'fan', 'FAN20G2905' => 'fan', 'FAN21G0548' => 'fan', 'FAN21G1300' => 'fan', 'FAN22G0077' => 'fan', 'FAN22G1315' => 'fan', 'FAN24G1280' => 'fan', 'FAN24G1445' => 'fan', 'FAN24G3527' => 'fan', 'FAN25G0464' => 'fan', 'FAN25G2885' => 'fan', 'FAN25G3270' => 'fan', 'FAN27G1101' => 'fan', 'FAN27G2846' => 'fan', 'FAN27G3524' => 'fan', 'FvH4_2g11770' => 'fve', 'FvH4_2g15630' => 'fve', 'FvH4_3g05570' => 'fve', 'FvH4_3g09110' => 'fve', 'FvH4_3g19940' => 'fve', 'FvH4_4g04821' => 'fve', 'FvH4_4g31480' => 'fve', 'FvH4_7g01740' => 'fve', 'Glyma.05G130400' => 'gma', 'Glyma.05G156400' => 'gma', 'Glyma.07G197000' => 'gma', 'Glyma.08G085151' => 'gma', 'Glyma.08G114500' => 'gma', 'Glyma.08G300400' => 'gma', 'Glyma.10G215800' => 'gma', 'Glyma.12G224400' => 'gma', 'Glyma.13G179300' => 'gma', 'Glyma.13G218151' => 'gma', 'Glyma.13G238800' => 'gma', 'Glyma.13G276900' => 'gma', 'Glyma.14G078200' => 'gma', 'Glyma.15G074500' => 'gma', 'Glyma.15G094100' => 'gma', 'Glyma.17G247200' => 'gma', 'Glyma.18G120100' => 'gma', 'Glyma.20G176000' => 'gma', 'Gohir.A01G063600' => 'ghi', 'Gohir.A01G170301' => 'ghi', 'Gohir.A02G060500' => 'ghi', 'Gohir.A05G133850' => 'ghi', 'Gohir.A05G161400' => 'ghi', 'Gohir.A06G012900' => 'ghi', 'Gohir.A06G035901' => 'ghi', 'Gohir.A06G127100' => 'ghi', 'Gohir.A06G210500' => 'ghi', 'Gohir.A08G008650' => 'ghi', 'Gohir.A09G072700' => 'ghi', 'Gohir.A09G088301' => 'ghi', 'Gohir.A10G040600' => 'ghi', 'Gohir.A12G036300' => 'ghi', 'Gohir.A12G143350' => 'ghi', 'Gohir.A12G165500' => 'ghi', 'Gohir.A13G145700' => 'ghi', 'Gohir.D01G050000' => 'ghi', 'Gohir.D01G051366' => 'ghi', 'Gohir.D01G161350' => 'ghi', 'Gohir.D02G065900' => 'ghi', 'Gohir.D05G164200' => 'ghi', 'Gohir.D05G355500' => 'ghi', 'Gohir.D06G010400' => 'ghi', 'Gohir.D06G111250' => 'ghi', 'Gohir.D06G132000' => 'ghi', 'Gohir.D06G210500' => 'ghi', 'Gohir.D07G165675' => 'ghi', 'Gohir.D08G062240' => 'ghi', 'Gohir.D08G086101' => 'ghi', 'Gohir.D08G138060' => 'ghi', 'Gohir.D09G072300' => 'ghi', 'Gohir.D10G041400' => 'ghi', 'Gohir.D11G191020' => 'ghi', 'Gohir.D11G212066' => 'ghi', 'Gohir.D12G036300' => 'ghi', 'Gohir.D12G168600' => 'ghi', 'Gohir.D13G150600' => 'ghi', 'Gorai.001G057300' => 'gra', 'Gorai.002G069900' => 'gra', 'Gorai.002G200000' => 'gra', 'Gorai.003G067600' => 'gra', 'Gorai.005G074800' => 'gra', 'Gorai.006G087300' => 'gra', 'Gorai.008G037500' => 'gra', 'Gorai.008G181400' => 'gra', 'Gorai.009G169400' => 'gra', 'Gorai.009G387900' => 'gra', 'Gorai.010G013300' => 'gra', 'Gorai.010G153800' => 'gra', 'Gorai.010G255800' => 'gra', 'Gorai.011G043700' => 'gra', 'Gorai.011G198900' => 'gra', 'Gorai.013G168400' => 'gra', 'GSVIVG01005212001' => 'vvi', 'GSVIVG01006163001' => 'vvi', 'GSVIVG01009625001' => 'vvi', 'GSVIVG01014338001' => 'vvi', 'GSVIVG01020005001' => 'vvi', 'GSVIVG01021450001' => 'vvi', 'GSVIVG01023975001' => 'vvi', 'GSVIVG01034490001' => 'vvi', 'HanXRQChr04g0112071' => 'han', 'HanXRQChr05g0131151' => 'han', 'HanXRQChr09g0262371' => 'han', 'HanXRQChr09g0268401' => 'han', 'HanXRQChr10g0279241' => 'han', 'HanXRQChr10g0297961' => 'han', 'HanXRQChr11g0326231' => 'han', 'HanXRQChr11g0328471' => 'han', 'HanXRQChr16g0507941' => 'han', 'HanXRQChr17g0560211' => 'han', 'Haze_02108' => 'cav', 'Haze_02428' => 'cav', 'Haze_05593' => 'cav', 'Haze_06448' => 'cav', 'Haze_09427' => 'cav', 'Haze_12022' => 'cav', 'Haze_17612' => 'cav', 'Haze_17928' => 'cav', 'Hma1.2p1_0032F.1_g019250' => 'hma', 'Hma1.2p1_0163F.1_g072690' => 'hma', 'Hma1.2p1_0265F.1_g106710' => 'hma', 'Hma1.2p1_0286F.1_g113970' => 'hma', 'Hma1.2p1_0363F.1_g136640' => 'hma', 'Hma1.2p1_0584F.1_g183470' => 'hma', 'Hma1.2p1_0885F.1_g232570' => 'hma', 'HPP92_006022' => 'vpl', 'HPP92_007320' => 'vpl', 'HPP92_011521' => 'vpl', 'HPP92_019387' => 'vpl', 'HPP92_024038' => 'vpl', 'Hund05891' => 'sun', 'Hund06450' => 'sun', 'Hund12053' => 'sun', 'Hund16800' => 'sun', 'Hund21222' => 'sun', 'Hund22896' => 'sun', 'Hund23746' => 'sun', 'Hund27083' => 'sun', 'Lalb_Chr02g0141831' => 'lal', 'Lalb_Chr02g0141841' => 'lal', 'Lalb_Chr05g0220411' => 'lal', 'Lalb_Chr06g0162081' => 'lal', 'Lalb_Chr09g0327651' => 'lal', 'Lalb_Chr13g0295051' => 'lal', 'Lalb_Chr15g0086801' => 'lal', 'Lalb_Chr16g0383781' => 'lal', 'Lalb_Chr16g0383791' => 'lal', 'Lalb_Chr18g0055441' => 'lal', 'Lalb_Chr18g0059611' => 'lal', 'Lalb_Chr20g0109661' => 'lal', 'Lalb_Chr20g0109831' => 'lal', 'Lalb_Chr20g0121871' => 'lal', 'Lalb_Chr22g0355361' => 'lal', 'Lalb_Chr25g0286371' => 'lal', 'Lj1A1187G43' => 'lonja', 'Lj1A1205T50' => 'lonja', 'Lj1A800G33' => 'lonja', 'Lj1C1187T7' => 'lonja', 'Lj1C843T11' => 'lonja', 'Lj1g0010940' => 'lja', 'Lj2A288T69' => 'lonja', 'Lj3g0024276' => 'lja', 'Lj4A47T76' => 'lonja', 'Lj4g0005805' => 'lja', 'Lj4g0006097' => 'lja', 'Lj4g0008528' => 'lja', 'Lj4g0024907' => 'lja', 'Lj5g0012472' => 'lja', 'Lj5g0018648' => 'lja', 'Lj6C789G1' => 'lonja', 'Lj6g0004000' => 'lja', 'Lj7A292G67' => 'lonja', 'Lj7A292T64' => 'lonja', 'Lj9A400T58' => 'lonja', 'Lsat_1_v5_gn_1_126181' => 'lsa', 'Lsat_1_v5_gn_4_123041' => 'lsa', 'Lsat_1_v5_gn_4_133620' => 'lsa', 'Lsat_1_v5_gn_4_53221' => 'lsa', 'Lsat_1_v5_gn_4_71961' => 'lsa', 'Lsat_1_v5_gn_7_105241' => 'lsa', 'Lsat_1_v5_gn_7_21361' => 'lsa', 'Lsat_1_v5_gn_7_28860' => 'lsa', 'Lsat_1_v5_gn_7_31260' => 'lsa', 'Lsat_1_v5_gn_8_52801' => 'lsa', 'Manes.02G191400' => 'mes', 'Manes.03G110100' => 'mes', 'Manes.04G071100' => 'mes', 'Manes.05G100500' => 'mes', 'Manes.05G164700' => 'mes', 'Manes.15G087000' => 'mes', 'Manes.15G121500' => 'mes', 'Manes.16G028300' => 'mes', 'Manes.17G046100' => 'mes', 'Manes.17G069800' => 'mes', 'Manes.18G100500' => 'mes', 'Mapoly0002s0109' => 'mpo', 'Mapoly0024s0007' => 'mpo', 'Mapoly0089s0032' => 'mpo', 'MBI04_g42241_MAGBIO' => 'mbi', 'MBI05_g11988_MAGBIO' => 'mbi', 'MBI05_g35452_MAGBIO' => 'mbi', 'MBI07_g30179_MAGBIO' => 'mbi', 'MBI07_g35859_MAGBIO' => 'mbi', 'MBI07_g35860_MAGBIO' => 'mbi', 'MBI07_g37166_MAGBIO' => 'mbi', 'MBI08_g18172_MAGBIO' => 'mbi', 'MBI09_g08441_MAGBIO' => 'mbi', 'MBI13_g01676_MAGBIO' => 'mbi', 'MBI14_g42955_MAGBIO' => 'mbi', 'MBI16_g13161_MAGBIO' => 'mbi', 'MBI17_g27204_MAGBIO' => 'mbi', 'MBI19_g21595_MAGBIO' => 'mbi', 'MD00G1148400' => 'mdo', 'MD02G1301200' => 'mdo', 'MD03G1227800' => 'mdo', 'MD05G1041100' => 'mdo', 'MD05G1124800' => 'mdo', 'MD05G1284000' => 'mdo', 'MD05G1338800' => 'mdo', 'MD05G1338900' => 'mdo', 'MD07G1022800' => 'mdo', 'MD10G1047500' => 'mdo', 'MD10G1127500' => 'mdo', 'MD10G1262300' => 'mdo', 'MD10G1293800' => 'mdo', 'MD16G1074300' => 'mdo', 'Medtr1g021670' => 'mtr', 'Medtr1g096320' => 'mtr', 'Medtr2g013690' => 'mtr', 'Medtr2g019450' => 'mtr', 'Medtr2g085170' => 'mtr', 'Medtr4g088785' => 'mtr', 'Medtr8g055930' => 'mtr', 'Medtr8g085850' => 'mtr', 'MELO3C002605.2' => 'cme', 'MELO3C003891.2' => 'cme', 'MELO3C004012.2' => 'cme', 'MELO3C007134.2' => 'cme', 'MELO3C008118.2' => 'cme', 'MELO3C016700.2' => 'cme', 'MELO3C024127.2' => 'cme', 'MELO3C033361.2' => 'cme', 'MELO3C033362.2' => 'cme', 'Migut.C00430' => 'egut', 'Migut.C01246' => 'egut', 'Migut.E00101' => 'egut', 'Migut.H01486' => 'egut', 'Migut.H01939' => 'egut', 'Migut.K00360' => 'egut', 'Migut.M00910' => 'egut', 'Migut.M01139' => 'egut', 'Migut.N02677' => 'egut', 'MSTRG.13252' => 'ama', 'MSTRG.14701' => 'ama', 'MSTRG.1521' => 'ama', 'MSTRG.15884' => 'ama', 'MSTRG.16242' => 'ama', 'MSTRG.22285' => 'ama', 'MSTRG.22444' => 'ama', 'MSTRG.2349' => 'ama', 'MSTRG.26308' => 'ama', 'MSTRG.28296' => 'ama', 'MSTRG.9895' => 'ama', 'Nitab4.5_0000110g0060' => 'nta', 'Nitab4.5_0000420g0130' => 'nta', 'Nitab4.5_0000422g0030' => 'nta', 'Nitab4.5_0000560g0180' => 'nta', 'Nitab4.5_0000703g0100' => 'nta', 'Nitab4.5_0000786g0200' => 'nta', 'Nitab4.5_0001336g0020' => 'nta', 'Nitab4.5_0001796g0030' => 'nta', 'Nitab4.5_0003348g0060' => 'nta', 'Nitab4.5_0003698g0040' => 'nta', 'Nitab4.5_0003942g0090' => 'nta', 'Nitab4.5_0004775g0070' => 'nta', 'Nitab4.5_0004864g0030' => 'nta', 'Nitab4.5_0005615g0020' => 'nta', 'Nitab4.5_0009288g0030' => 'nta', 'Nitab4.5_0009341g0010' => 'nta', 'Nitab4.5_0009535g0010' => 'nta', 'Nn1g03995' => 'nnu', 'Nn1g04100' => 'nnu', 'Nn1g06530' => 'nnu', 'Nn3g16404' => 'nnu', 'Nn3g17212' => 'nnu', 'Nn3g20776' => 'nnu', 'Nn3g21923' => 'nnu', 'Nn5g27737' => 'nnu', 'Nn5g29461' => 'nnu', 'Nn7g38355' => 'nnu', 'Nn8g39873' => 'nnu', 'Oeu000548.2' => 'oeu', 'Oeu004672.1' => 'oeu', 'Oeu015605.2' => 'oeu', 'Oeu016092.1' => 'oeu', 'Oeu017879.3' => 'oeu', 'Oeu024910.1' => 'oeu', 'Oeu028965.1' => 'oeu', 'Oeu031269.1' => 'oeu', 'Oeu031270.1' => 'oeu', 'Oeu032535.1' => 'oeu', 'Oeu034151.1' => 'oeu', 'Oeu034152.1' => 'oeu', 'Oeu034588.2' => 'oeu', 'Oeu050846.1' => 'oeu', 'Oeu050849.2' => 'oeu', 'Oeu051063.2' => 'oeu', 'Oeu052368.1' => 'oeu', 'Oeu052370.1' => 'oeu', 'Os01g0210400' => 'osa', 'Os01g0304300' => 'osa', 'Os01g0749100' => 'osa', 'Os02g0745800' => 'osa', 'Os03g0769050' => 'osa', 'Os05g0531500' => 'osa', 'Os06g0724300' => 'osa', 'Os11g0198100' => 'osa', 'Peaxi162Scf00069g01425' => 'pax', 'Peaxi162Scf00280g00811' => 'pax', 'Peaxi162Scf00310g00615' => 'pax', 'Peaxi162Scf00362g00542' => 'pax', 'Peaxi162Scf00461g00310' => 'pax', 'Peaxi162Scf00530g00118' => 'pax', 'Peaxi162Scf00541g00057' => 'pax', 'Peaxi162Scf00661g00017' => 'pax', 'Peaxi162Scf00926g00027' => 'pax', 'Peaxi162Scf01064g00263' => 'pax', 'Peaxi162Scf01211g00135' => 'pax', 'PGR004G2336' => 'pgr', 'PGR042G0327' => 'pgr', 'PGR042G1957' => 'pgr', 'PGR042G2003' => 'pgr', 'PGR042G3929' => 'pgr', 'PGR083G1137' => 'pgr', 'PGR083G1364' => 'pgr', 'PGSC0003DMG400003381' => 'stu', 'PGSC0003DMG400003417' => 'stu', 'PGSC0003DMG400008981' => 'stu', 'PGSC0003DMG400012417' => 'stu', 'PGSC0003DMG400012823' => 'stu', 'PGSC0003DMG400016885' => 'stu', 'PGSC0003DMG400022812' => 'stu', 'PGSC0003DMG400029726' => 'stu', 'PGSC0003DMG401009243' => 'stu', 'PGSC0003DMG401031505' => 'stu', 'PGSC0003DMG402031505' => 'stu', 'Phvul.001G017600' => 'pvu', 'Phvul.002G193500' => 'pvu', 'Phvul.002G228900' => 'pvu', 'Phvul.002G236800' => 'pvu', 'Phvul.003G049500' => 'pvu', 'Phvul.005G072000' => 'pvu', 'Phvul.006G164800' => 'pvu', 'Phvul.006G185100' => 'pvu', 'Phvul.007G090000' => 'pvu', 'Potri.001G399800' => 'ptr', 'Potri.002G149900' => 'ptr', 'Potri.004G044100' => 'ptr', 'Potri.004G177600' => 'ptr', 'Potri.009G138000' => 'ptr', 'Potri.010G094000' => 'ptr', 'Potri.011G053000' => 'ptr', 'Potri.011G119300' => 'ptr', 'Potri.013G113700' => 'ptr', 'Potri.018G107800' => 'ptr', 'Potri.019G084100' => 'ptr', 'Pp3c14_23720' => 'ppa', 'Pp3c16_6340' => 'ppa', 'Pp3c23_13420' => 'ppa', 'Pp3c24_2740' => 'ppa', 'Pp3c25_860' => 'ppa', 'Pp3c8_21750' => 'ppa', 'Prupe.1G273000' => 'ppe', 'Prupe.1G273700' => 'ppe', 'Prupe.1G274100' => 'ppe', 'Prupe.2G023300' => 'ppe', 'Prupe.4G048000' => 'ppe', 'Prupe.4G080400' => 'ppe', 'Prupe.4G181200' => 'ppe', 'Prupe.8G056900' => 'ppe', 'Prupe.8G168700' => 'ppe', 'Psat1g189080' => 'psa', 'Psat1g204760' => 'psa', 'Psat4g175560' => 'psa', 'Psat4g177720' => 'psa', 'Psat5g244240' => 'psa', 'Psat6g010720' => 'psa', 'Psat6g187200' => 'psa', 'Psat7g072040' => 'psa', 'PSO017G3501' => 'pso', 'PSO063G2148' => 'pso', 'PSO063G5608' => 'pso', 'PSO210G6392' => 'pso', 'PSO541G2319' => 'pso', 'PSO541G2836' => 'pso', 'PSO541G4012' => 'pso', 'PSO541G6253' => 'pso', 'PSO675G0580' => 'pso', 'PSO675G0856' => 'pso', 'PSO675G5635' => 'pso', 'PSO675G9157' => 'pso', 'PSO832G1660' => 'pso', 'PSO832G1969' => 'pso', 'QL02p007186' => 'qlo', 'QL02p033904' => 'qlo', 'QL03p064391' => 'qlo', 'QL05p040593' => 'qlo', 'QL05p058242' => 'qlo', 'QL08p021825' => 'qlo', 'QL11p004981' => 'qlo', 'RcHm_v2.0_Chr1g0318301' => 'rch', 'RcHm_v2.0_Chr4g0418501' => 'rch', 'RcHm_v2.0_Chr4g0439971' => 'rch', 'RcHm_v2.0_Chr5g0008541' => 'rch', 'RcHm_v2.0_Chr5g0014101' => 'rch', 'RcHm_v2.0_Chr5g0014131' => 'rch', 'RcHm_v2.0_Chr5g0033621' => 'rch', 'RcHm_v2.0_Chr6g0272041' => 'rch', 'RcHm_v2.0_Chr6g0278831' => 'rch', 'Rhsim02G0130400' => 'rsi', 'Rhsim02G0171100' => 'rsi', 'Rhsim05G0053000' => 'rsi', 'Rhsim05G0053100' => 'rsi', 'Rhsim06G0096500' => 'rsi', 'Rhsim06G0096600' => 'rsi', 'Rhsim06G0199100' => 'rsi', 'Rhsim12G0062300' => 'rsi', 'Rhsim12G0062800' => 'rsi', 'Sabra02G0118600' => 'sbr', 'Sabra04G0027300' => 'sbr', 'Sabra04G0119500' => 'sbr', 'Sabra08G0112500' => 'sbr', 'Sabra11G0036800' => 'sbr', 'Sabra11G0103800' => 'sbr', 'Sabra13G0096300' => 'sbr', 'Sabra16G0262300' => 'sbr', 'Sabra18G0091700' => 'sbr', 'Sabra19G0095400' => 'sbr', 'SalBow6G3080' => 'sbo', 'SalBow7G1157' => 'sbo', 'SalBow7G2123' => 'sbo', 'SalBow7G2285' => 'sbo', 'SalBow7G3537' => 'sbo', 'SalBow8G2947' => 'sbo', 'SalBow8G4463' => 'sbo', 'SalBow8G5466' => 'sbo', 'Sc01g0001750' => 'sci', 'Sc02g0006640' => 'sci', 'Sc02g0006670' => 'sci', 'Sc04g0008220' => 'sci', 'Sc05g0006190' => 'sci', 'Sc08g0002760' => 'sci', 'Sc17g0006170' => 'sci', 'Sc22g0002050' => 'sci', 'Sc23g0001190' => 'sci', 'Sc24g0000980' => 'sci', 'Sed0006245' => 'sed', 'Sed0007543' => 'sed', 'Sed0009411' => 'sed', 'Sed0010765' => 'sed', 'Sed0012944' => 'sed', 'Sed0014682' => 'sed', 'Sed0016174' => 'sed', 'Sed0016796' => 'sed', 'Sed0020317' => 'sed', 'Sed0021467' => 'sed', 'SEGI_01316' => 'sgi', 'SEGI_03374' => 'sgi', 'SEGI_16265' => 'sgi', 'SEGI_18569' => 'sgi', 'SEGI_20351' => 'sgi', 'SEGI_26395' => 'sgi', 'SEGI_29469' => 'sgi', 'SEGI_34771' => 'sgi', 'SEGI_36769' => 'sgi', 'SEGI_37139' => 'sgi', 'SGA_v2.0_scaffold100G29687' => 'sas', 'SGA_v2.0_scaffold118G32472' => 'sas', 'SGA_v2.0_scaffold14G07051' => 'sas', 'SGA_v2.0_scaffold183G39845' => 'sas', 'SGA_v2.0_scaffold1G00174' => 'sas', 'SGA_v2.0_scaffold22G09714' => 'sas', 'SGA_v2.0_scaffold333G48992' => 'sas', 'SGA_v2.0_scaffold46G17491' => 'sas', 'SGA_v2.0_scaffold49G18294' => 'sas', 'SGA_v2.0_scaffold63G21658' => 'sas', 'SHI01741' => 'shi', 'SHI05771' => 'shi', 'SHI18077' => 'shi', 'SHI20525' => 'shi', 'SHI20527' => 'shi', 'SHI20528' => 'shi', 'SMO172G0185' => 'smo', 'SMO198G0020' => 'smo', 'SMO351G0006' => 'smo', 'SMO356G0118' => 'smo', 'SMO358G0296' => 'smo', 'SMO367G0079' => 'smo', 'SMO367G1277' => 'smo', 'Solyc01g014220.3' => 'sly', 'Solyc01g111770.2' => 'sly', 'Solyc02g078180.3' => 'sly', 'Solyc03g006430.3' => 'sly', 'Solyc03g006456.1' => 'sly', 'Solyc03g079860.2' => 'sly', 'Solyc04g079770.3' => 'sly', 'Solyc05g007430.4' => 'sly', 'Solyc07g063150.3' => 'sly', 'Solyc08g016620.3' => 'sly', 'Solyc09g057590.3' => 'sly', 'Solyc09g057600.1' => 'sly', 'Solyc10g009050.3' => 'sly', 'Solyc11g017420.2' => 'sly', 'Sopen01g053810' => 'spe', 'Sopen02g023040' => 'spe', 'Sopen03g002440' => 'spe', 'Sopen04g033350' => 'spe', 'Sopen05g003310' => 'spe', 'Sopen07g004050' => 'spe', 'Sopen07g031340' => 'spe', 'Sopen08g006990' => 'spe', 'Sopen10g004830' => 'spe', 'Sopen11g009370' => 'spe', 'Sp1g24450' => 'spa', 'Sp1g29670' => 'spa', 'Sp1g39600' => 'spa', 'Sp2g11080' => 'spa', 'Sp2g13970' => 'spa', 'Sp4g16130' => 'spa', 'Sp6g13080' => 'spa', 'Sp7g37270' => 'spa', 'TAR371G0065' => 'tar', 'TAR376G0340' => 'tar', 'TAR376G0435' => 'tar', 'TAR381G0002' => 'tar', 'TAR381G1236' => 'tar', 'TAR624G0055' => 'tar', 'TAR624G0324' => 'tar', 'TAR624G0696' => 'tar', 'TAR624G0906' => 'tar', 'TAR625G0107' => 'tar', 'TAR626G0015' => 'tar', 'TAR626G1356' => 'tar', 'TAR627G0888' => 'tar', 'TAR628G0399' => 'tar', 'TAR628G1327' => 'tar', 'TAR629G2831' => 'tar', 'TAR629G2874' => 'tar', 'TAR633G1432' => 'tar', 'TAR633G2771' => 'tar', 'THA.LOC104803394' => 'tha', 'THA.LOC104805153' => 'tha', 'THA.LOC104806784' => 'tha', 'THA.LOC104810473' => 'tha', 'THA.LOC104813100' => 'tha', 'THA.LOC104814215' => 'tha', 'THA.LOC104815554' => 'tha', 'THA.LOC104820544' => 'tha', 'THA.LOC104824754' => 'tha', 'THA.LOC104827717' => 'tha', 'Thecc.02G031400' => 'tca', 'Thecc.02G055900' => 'tca', 'Thecc.02G350800' => 'tca', 'Thecc.06G150900' => 'tca', 'Thecc.06G186600' => 'tca', 'Thecc.07G089600' => 'tca', 'Thecc.08G020400' => 'tca', 'Thecc.08G182100' => 'tca', 'Thhalv10000873m.g' => 'esa', 'Thhalv10004185m.g' => 'esa', 'Thhalv10006981m.g' => 'esa', 'Thhalv10007204m.g' => 'esa', 'Thhalv10011374m.g' => 'esa', 'Thhalv10013482m.g' => 'esa', 'Thhalv10017801m.g' => 'esa', 'Thhalv10024983m.g' => 'esa', 'TPR.G12072' => 'tpr', 'TPR.G15769' => 'tpr', 'TPR.G16504' => 'tpr', 'TPR.G16506' => 'tpr', 'TPR.G24345' => 'tpr', 'TPR.G26666' => 'tpr', 'TPR.G27320' => 'tpr', 'TPR.G31819' => 'tpr', 'TPR.G38879' => 'tpr', 'TPR.G39015' => 'tpr', 'TPR.G8819' => 'tpr', 'TWI09G0924' => 'twi', 'TWI12G0811' => 'twi', 'TWI12G1294' => 'twi', 'TWI31G0150' => 'twi', 'TWI36G1262' => 'twi', 'TWI38G1287' => 'twi', 'TWI38G1633' => 'twi', 'TWI38G1982' => 'twi', 'TWI39G0116' => 'twi', 'TWI60G1011' => 'twi', 'TWI63G0171' => 'twi', 'TWI73G0839' => 'twi', 'TWI79G1511' => 'twi', 'unitig_0.g915' => 'ugi', 'unitig_0.g916' => 'ugi', 'unitig_21.g20219' => 'ugi', 'unitig_21.g20416' => 'ugi', 'unitig_578.g16132' => 'ugi', 'unitig_578.g16718' => 'ugi', 'unitig_62.g23481' => 'ugi', 'unitig_744.g24535' => 'ugi', 'unitig_749.g13525' => 'ugi', 'vmacro01248' => 'vma', 'vmacro02290' => 'vma', 'vmacro10946' => 'vma', 'vmacro11865' => 'vma', 'vmacro12493' => 'vma', 'vmacro17322' => 'vma', 'vmacro21599' => 'vma', 'vmacro23041' => 'vma', 'VMungo0251G0004' => 'vmu', 'VMungo0251G2639' => 'vmu', 'VMungo0251G2967' => 'vmu', 'VMungo0540G0864' => 'vmu', 'VMungo0540G1569' => 'vmu', 'VMungo0647G0317' => 'vmu', 'VMungo0720G1373' => 'vmu', 'VMungo0720G1508' => 'vmu', 'VMungo1080G0485' => 'vmu', 'VMungo1215G3177' => 'vmu', 'Zm00001eb112600' => 'zma', 'Zm00001eb120220' => 'zma', 'Zm00001eb153240' => 'zma', 'Zm00001eb168880' => 'zma', 'Zm00001eb213920' => 'zma', 'Zm00001eb228280' => 'zma', 'Zm00001eb254580' => 'zma', 'Zm00001eb272180' => 'zma', 'Zm00001eb293190' => 'zma', 'Zm00001eb322930' => 'zma', 'Zm00001eb353360' => 'zma', 'Zm00001eb353390' => 'zma', 'Zm00001eb353430' => 'zma', 'Zm00001eb353440' => 'zma', 'Zm00001eb353780' => 'zma' ) $gf_id = 'HOM05D000499' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000499' ) $data_identifier = 'HOM05D000499' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 29, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 12, 'amhyb' => (int) 8, 'aly' => (int) 12, 'aox' => (int) 9, 'arhy' => (int) 26, 'ath' => (int) 8, 'atr' => (int) 7, 'acertr' => (int) 10, 'cqu' => (int) 15, 'bca' => (int) 29, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 11, 'cansat' => (int) 8, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 9, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 8, 'cpa' => (int) 10, 'csa' => (int) 7, 'camsi' => (int) 20, 'dca' => (int) 8, 'din' => (int) 12, 'dzi' => (int) 14, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 6, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 38, 'gra' => (int) 16, 'vvi' => (int) 8, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 5, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 11, 'lja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 11, 'mpo' => (int) 3, 'mbi' => (int) 14, 'mdo' => (int) 14, 'mtr' => (int) 8, 'cme' => (int) 9, 'egut' => (int) 9, 'ama' => (int) 11, 'nta' => (int) 17, 'nnu' => (int) 11, 'oeu' => (int) 18, 'osa' => (int) 8, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 6, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 9, 'rsi' => (int) 9, 'sbr' => (int) 10, 'sbo' => (int) 8, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 10, 'sas' => (int) 10, 'shi' => (int) 6, 'smo' => (int) 7, 'sly' => (int) 14, 'spe' => (int) 10, 'spa' => (int) 8, 'tar' => (int) 19, 'tha' => (int) 10, 'tca' => (int) 8, 'esa' => (int) 8, 'tpr' => (int) 11, 'twi' => (int) 13, 'ugi' => (int) 9, 'vma' => (int) 8, 'vmu' => (int) 10, 'zma' => (int) 15 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb353780' $species_info = array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ) $local_species = 'aar' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000499', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1066', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p29780' => 'bna', 'A02p33180' => 'bna', 'A03p16470' => 'bna', 'A03p66010' => 'bna', 'A04p25970' => 'bna', 'A06p01270' => 'bna', 'A06p46080' => 'bna', 'A07p11400' => 'bna', 'A08p01840' => 'bna', 'A08p08230' => 'bna', 'A08p25740' => 'bna', 'A09p32070' => 'bna', 'A09p37830' => 'bna', 'A09p42840' => 'bna', 'A09p42850' => 'bna', 'Aa31LG10G2060' => 'aar', 'Aa31LG2G7410' => 'aar', 'Aa31LG6G10200' => 'aar', 'Aa31LG6G16680' => 'aar', 'Aa31LG6G8470' => 'aar', 'Aa31LG9G12730' => 'aar', 'Aa31LG9G13680' => 'aar', 'Aa31LG9G14920' => 'aar', 'Aa31LG9G6650' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4977' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5467' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3254' => 'aag', 'Actinidia02578' => 'ach', 'Actinidia07693' => 'ach', 'Actinidia08413' => 'ach', 'Actinidia08414' => 'ach', 'Actinidia15289' => 'ach', 'Actinidia19871' => 'ach', 'Actinidia21475' => 'ach', 'Actinidia22576' => 'ach', 'Actinidia28327' => 'ach', 'Actinidia32491' => 'ach', 'Actinidia39463' => 'ach', 'Actinidia39571' => 'ach', 'Ah.01g013750' => 'amhyb', 'Ah.01g023210' => 'amhyb', 'Ah.04g164850' => 'amhyb', 'Ah.05g178060' => 'amhyb', 'Ah.07g204270' => 'amhyb', 'Ah.07g208480' => 'amhyb', 'Ah.09g237410' => 'amhyb', 'Ah.14g089460' => 'amhyb', 'AL1G41790' => 'aly', 'AL1G49050' => 'aly', 'AL1G53810' => 'aly', 'AL1G61400' => 'aly', 'AL4G18580' => 'aly', 'AL5G12510' => 'aly', 'AL5G12540' => 'aly', 'AL6G43230' => 'aly', 'AL7G10370' => 'aly', 'AL7G19250' => 'aly', 'AL8G12240' => 'aly', 'AL8G18540' => 'aly', 'Aqoxy1G02409' => 'aox', 'Aqoxy2G03993' => 'aox', 'Aqoxy3G03357' => 'aox', 'Aqoxy4G00785' => 'aox', 'Aqoxy5G02598' => 'aox', 'Aqoxy6G00132' => 'aox', 'Aqoxy7G01776' => 'aox', 'Aqoxy7G02316' => 'aox', 'Aqoxy7G03973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.12AFKW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B8730' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27IQR1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3F75VG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3RE0GA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41TCQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.527VTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FIR39' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5W8UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DA38EV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ63HS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H1I32C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HC27T5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4M8AP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7N3CZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9UVDZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LS1NQA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT1D4B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SKC4TM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCFV76' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF9Q1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQWD9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1ZM88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WE07RT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YCK7VH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJE6Q6' => 'arhy', 'AT1G28240' => 'ath', 'AT1G34550' => 'ath', 'AT1G53040' => 'ath', 'AT2G02910' => 'ath', 'AT4G09630' => 'ath', 'AT4G38500' => 'ath', 'AT5G42660' => 'ath', 'AT5G46220' => 'ath', 'ATR0152G026' => 'atr', 'ATR0564G343' => 'atr', 'ATR0706G151' => 'atr', 'ATR0733G207' => 'atr', 'ATR0751G234' => 'atr', 'ATR0807G048' => 'atr', 'ATR1091G084' => 'atr', 'Atru.chr10.1229' => 'acertr', 'Atru.chr10.1230' => 'acertr', 'Atru.chr10.1874' => 'acertr', 'Atru.chr11.1808' => 'acertr', 'Atru.chr13.1795' => 'acertr', 'Atru.chr13.570' => 'acertr', 'Atru.chr2.2608' => 'acertr', 'Atru.chr2.2609' => 'acertr', 'Atru.chr5.3428' => 'acertr', 'Atru.chr8.1171' => 'acertr', 'AUR62004651' => 'cqu', 'AUR62008675' => 'cqu', 'AUR62010014' => 'cqu', 'AUR62013004' => 'cqu', 'AUR62014825' => 'cqu', 'AUR62015015' => 'cqu', 'AUR62015151' => 'cqu', 'AUR62017020' => 'cqu', 'AUR62019422' => 'cqu', 'AUR62023570' => 'cqu', 'AUR62025571' => 'cqu', 'AUR62029098' => 'cqu', 'AUR62033863' => 'cqu', 'AUR62034296' => 'cqu', 'AUR62040075' => 'cqu', 'BcaB02g07334' => 'bca', 'BcaB02g10575' => 'bca', 'BcaB03g12119' => 'bca', 'BcaB03g12120' => 'bca', 'BcaB03g13945' => 'bca', 'BcaB04g17123' => 'bca', 'BcaB04g17867' => 'bca', 'BcaB04g19839' => 'bca', 'BcaB07g30317' => 'bca', 'BcaB07g32432' => 'bca', 'BcaB07g33362' => 'bca', 'BcaB08g36611' => 'bca', 'BcaC01g00028' => 'bca', 'BcaC01g01356' => 'bca', 'BcaC01g02034' => 'bca', 'BcaC01g06051' => 'bca', 'BcaC03g16839' => 'bca', 'BcaC03g17176' => 'bca', 'BcaC05g26829' => 'bca', 'BcaC06g31490' => 'bca', 'BcaC06g35344' => 'bca', 'BcaC06g36570' => 'bca', 'BcaC07g37537' => 'bca', 'BcaC08g43491' => 'bca', 'BcaC08g43773' => 'bca', 'BcaNung00234' => 'bca', 'BcaNung01982' => 'bca', 'BcaNung03707' => 'bca', 'BcaNung06454' => 'bca', 'BolC2t10762H' => 'bol', 'BolC2t11191H' => 'bol', 'BolC3t14322H' => 'bol', 'BolC3t19747H' => 'bol', 'BolC3t21425H' => 'bol', 'BolC4t27800H' => 'bol', 'BolC5t31423H' => 'bol', 'BolC6t35951H' => 'bol', 'BolC6t36282H' => 'bol', 'BolC7t40678H' => 'bol', 'BolC7t40679H' => 'bol', 'BolC7t42222H' => 'bol', 'BolC7t43492H' => 'bol', 'BolC7t46785H' => 'bol', 'BolC8t47853H' => 'bol', 'BolC9t56805H' => 'bol', 'BraA02t08000Z' => 'bra', 'BraA02t08341Z' => 'bra', 'BraA03t10936Z' => 'bra', 'BraA03t15657Z' => 'bra', 'BraA04t18100Z' => 'bra', 'BraA05t20523Z' => 'bra', 'BraA06t23353Z' => 'bra', 'BraA06t27473Z' => 'bra', 'BraA06t27769Z' => 'bra', 'BraA07t28928Z' => 'bra', 'BraA08t32236Z' => 'bra', 'BraA08t32841Z' => 'bra', 'BraA08t34524Z' => 'bra', 'BraA09t38742Z' => 'bra', 'BraA09t39295Z' => 'bra', 'C02p47180' => 'bna', 'C02p50990' => 'bna', 'C03p19360' => 'bna', 'C03p74950' => 'bna', 'C03p91000' => 'bna', 'C04p63260' => 'bna', 'C05p27050' => 'bna', 'C06p08750' => 'bna', 'C06p11490' => 'bna', 'C07p02820' => 'bna', 'C07p17180' => 'bna', 'C07p29440' => 'bna', 'C07p63730' => 'bna', 'C09p39260' => 'bna', 'CAN.G1164.34' => 'can', 'CAN.G1164.39' => 'can', 'CAN.G1530.3' => 'can', 'CAN.G162.61' => 'can', 'CAN.G176.6' => 'can', 'CAN.G289.49' => 'can', 'CAN.G370.21' => 'can', 'CAN.G370.22' => 'can', 'CAN.G371.117' => 'can', 'CAN.G58.37' => 'can', 'CAN.G588.98' => 'can', 'CANSAT21G2266' => 'cansat', 'CANSAT25G2799' => 'cansat', 'CANSAT35G0862' => 'cansat', 'CANSAT35G1704' => 'cansat', 'CANSAT35G1760' => 'cansat', 'CANSAT56G3971' => 'cansat', 'CANSAT56G4116' => 'cansat', 'CANSAT80G1259' => 'cansat', 'CARHR027730' => 'chi', 'CARHR033880' => 'chi', 'CARHR043270' => 'chi', 'CARHR145330' => 'chi', 'CARHR145340' => 'chi', 'CARHR175570' => 'chi', 'CARHR181570' => 'chi', 'CARHR258470' => 'chi', 'CARHR260490' => 'chi', 'CARHR294220' => 'chi', 'Carub.0001s2668' => 'cru', 'Carub.0001s3257' => 'cru', 'Carub.0001s4220' => 'cru', 'Carub.0005s0179' => 'cru', 'Carub.0006s2807' => 'cru', 'Carub.0007s0039' => 'cru', 'Carub.0008s0169' => 'cru', 'Carub.0008s0636' => 'cru', 'Ca_00338_v3' => 'car', 'Ca_00542_v3' => 'car', 'Ca_01844_v3' => 'car', 'Ca_10611_v3' => 'car', 'Ca_13326_v3' => 'car', 'Ca_17944_v3' => 'car', 'Ca_18546_v3' => 'car', 'Ca_24219_v3' => 'car', 'Ca_29972_v3' => 'car', 'CBR_g3681' => 'cbr', 'CBR_g40021' => 'cbr', 'Cc01_g08140' => 'ccan', 'Cc02_g13410' => 'ccan', 'Cc02_g37480' => 'ccan', 'Cc05_g12030' => 'ccan', 'Cc09_g03370' => 'ccan', 'Cc09_g10300' => 'ccan', 'Cc10_g03530' => 'ccan', 'Cc10_g11380' => 'ccan', 'CDE01G0176' => 'cde', 'CDE02G0675' => 'cde', 'CDE02G0942' => 'cde', 'CDE02G1153' => 'cde', 'CDE02G4177' => 'cde', 'CDE04G2117' => 'cde', 'CDE04G2736' => 'cde', 'CDE08G1161' => 'cde', 'CDE09G1238' => 'cde', 'Cfa000467' => 'cfa', 'Cfa000947' => 'cfa', 'Cfa004969' => 'cfa', 'Cfa005284' => 'cfa', 'Cfa008993' => 'cfa', 'Cfa018187' => 'cfa', 'Cfa018454' => 'cfa', 'Cfa020585' => 'cfa', 'Ciclev10000424m.g' => 'ccl', 'Ciclev10003605m.g' => 'ccl', 'Ciclev10007828m.g' => 'ccl', 'Ciclev10014620m.g' => 'ccl', 'Ciclev10015169m.g' => 'ccl', 'Ciclev10018291m.g' => 'ccl', 'Ciclev10028256m.g' => 'ccl', 'Ciclev10033822m.g' => 'ccl', 'CiPaw.05G060300' => 'cil', 'CiPaw.05G085000' => 'cil', 'CiPaw.06G083700' => 'cil', 'CiPaw.06G120300' => 'cil', 'CiPaw.09G060500' => 'cil', 'CiPaw.09G123800' => 'cil', 'CiPaw.11G169700' => 'cil', 'CiPaw.12G118300' => 'cil', 'CiPaw.15G071000' => 'cil', 'CiPaw.15G081900' => 'cil', 'ClCG01G024610' => 'cla', 'ClCG03G006070' => 'cla', 'ClCG05G019250' => 'cla', 'ClCG09G009500' => 'cla', 'ClCG11G008200' => 'cla', 'ClCG11G018080' => 'cla', 'COL.COLO4_17373' => 'col', 'COL.COLO4_22994' => 'col', 'COL.COLO4_26389' => 'col', 'COL.COLO4_27170' => 'col', 'COL.COLO4_31074' => 'col', 'COL.COLO4_31465' => 'col', 'COL.COLO4_36438' => 'col', 'COL.COLO4_36439' => 'col', 'Cpa.g.c38781' => 'cpa', 'Cpa.g.sc128.12' => 'cpa', 'Cpa.g.sc166.7' => 'cpa', 'Cpa.g.sc166.8' => 'cpa', 'Cpa.g.sc20.111' => 'cpa', 'Cpa.g.sc27.31' => 'cpa', 'Cpa.g.sc64.36' => 'cpa', 'Cpa.g.sc64.37' => 'cpa', 'Cpa.g.sc66.49' => 'cpa', 'Cpa.g.sc80.64' => 'cpa', 'CsaV3_1G012320' => 'csa', 'CsaV3_2G008480' => 'csa', 'CsaV3_2G033450' => 'csa', 'CsaV3_3G044830' => 'csa', 'CsaV3_4G033710' => 'csa', 'CsaV3_6G051730' => 'csa', 'CsaV3_7G025350' => 'csa', 'CSS0001067' => 'camsi', 'CSS0005996' => 'camsi', 'CSS0006590' => 'camsi', 'CSS0009673' => 'camsi', 'CSS0010201' => 'camsi', 'CSS0010549' => 'camsi', 'CSS0011364' => 'camsi', 'CSS0014473' => 'camsi', 'CSS0014961' => 'camsi', 'CSS0020191' => 'camsi', 'CSS0021165' => 'camsi', 'CSS0022306' => 'camsi', 'CSS0030591' => 'camsi', 'CSS0030696' => 'camsi', 'CSS0032653' => 'camsi', 'CSS0037487' => 'camsi', 'CSS0041102' => 'camsi', 'CSS0041261' => 'camsi', 'CSS0046246' => 'camsi', 'CSS0049256' => 'camsi', 'DCAR_004075' => 'dca', 'DCAR_011538' => 'dca', 'DCAR_019553' => 'dca', 'DCAR_020952' => 'dca', 'DCAR_021739' => 'dca', 'DCAR_027407' => 'dca', 'DCAR_027913' => 'dca', 'DCAR_028066' => 'dca', 'Dinv05899' => 'din', 'Dinv07563' => 'din', 'Dinv08010' => 'din', 'Dinv14125' => 'din', 'Dinv20172' => 'din', 'Dinv30743' => 'din', 'Dinv31229' => 'din', 'Dinv34162' => 'din', 'Dinv36028' => 'din', 'Dinv39368' => 'din', 'Dinv40565' => 'din', 'Dinv41706' => 'din', 'Duzib052G0089' => 'dzi', 'Duzib116G0641' => 'dzi', 'Duzib132G0069' => 'dzi', 'Duzib132G1219' => 'dzi', 'Duzib147G0278' => 'dzi', 'Duzib160G0480' => 'dzi', 'Duzib170G0661' => 'dzi', 'Duzib177G0591' => 'dzi', 'Duzib187G1353' => 'dzi', 'Duzib192G0858' => 'dzi', 'Duzib192G0883' => 'dzi', 'Duzib213G0506' => 'dzi', 'Duzib235G0289' => 'dzi', 'Duzib251G0422' => 'dzi', 'ECA232G3898' => 'eca', 'ECA233G5950' => 'eca', 'ECA234G1699' => 'eca', 'ECA234G2421' => 'eca', 'ECA236G0426' => 'eca', 'ECA236G4331' => 'eca', 'ECA248G2573' => 'eca', 'EL10Ac1g00077' => 'bvu', 'EL10Ac1g01746' => 'bvu', 'EL10Ac2g03464' => 'bvu', 'EL10Ac4g08176' => 'bvu', 'EL10Ac7g17521' => 'bvu', 'EL10Ac8g20386' => 'bvu', 'EL10Ac9g21343' => 'bvu', 'EL10Ac9g22688' => 'bvu', 'Eucgr.B03434' => 'egr', 'Eucgr.D00618' => 'egr', 'Eucgr.E02395' => 'egr', 'Eucgr.F01129' => 'egr', 'Eucgr.F02622' => 'egr', 'Eucgr.F04207' => 'egr', 'FAN01G0570' => 'fan', 'FAN03G3351' => 'fan', 'FAN06G3702' => 'fan', 'FAN07G2149' => 'fan', 'FAN10G3758' => 'fan', 'FAN11G1170' => 'fan', 'FAN11G2050' => 'fan', 'FAN11G2724' => 'fan', 'FAN12G1700' => 'fan', 'FAN12G2028' => 'fan', 'FAN15G1160' => 'fan', 'FAN15G3063' => 'fan', 'FAN16G2540' => 'fan', 'FAN16G3077' => 'fan', 'FAN16G3624' => 'fan', 'FAN17G0221' => 'fan', 'FAN20G2492' => 'fan', 'FAN20G2905' => 'fan', 'FAN21G0548' => 'fan', 'FAN21G1300' => 'fan', 'FAN22G0077' => 'fan', 'FAN22G1315' => 'fan', 'FAN24G1280' => 'fan', 'FAN24G1445' => 'fan', 'FAN24G3527' => 'fan', 'FAN25G0464' => 'fan', 'FAN25G2885' => 'fan', 'FAN25G3270' => 'fan', 'FAN27G1101' => 'fan', 'FAN27G2846' => 'fan', 'FAN27G3524' => 'fan', 'FvH4_2g11770' => 'fve', 'FvH4_2g15630' => 'fve', 'FvH4_3g05570' => 'fve', 'FvH4_3g09110' => 'fve', 'FvH4_3g19940' => 'fve', 'FvH4_4g04821' => 'fve', 'FvH4_4g31480' => 'fve', 'FvH4_7g01740' => 'fve', 'Glyma.05G130400' => 'gma', 'Glyma.05G156400' => 'gma', 'Glyma.07G197000' => 'gma', 'Glyma.08G085151' => 'gma', 'Glyma.08G114500' => 'gma', 'Glyma.08G300400' => 'gma', 'Glyma.10G215800' => 'gma', 'Glyma.12G224400' => 'gma', 'Glyma.13G179300' => 'gma', 'Glyma.13G218151' => 'gma', 'Glyma.13G238800' => 'gma', 'Glyma.13G276900' => 'gma', 'Glyma.14G078200' => 'gma', 'Glyma.15G074500' => 'gma', 'Glyma.15G094100' => 'gma', 'Glyma.17G247200' => 'gma', 'Glyma.18G120100' => 'gma', 'Glyma.20G176000' => 'gma', 'Gohir.A01G063600' => 'ghi', 'Gohir.A01G170301' => 'ghi', 'Gohir.A02G060500' => 'ghi', 'Gohir.A05G133850' => 'ghi', 'Gohir.A05G161400' => 'ghi', 'Gohir.A06G012900' => 'ghi', 'Gohir.A06G035901' => 'ghi', 'Gohir.A06G127100' => 'ghi', 'Gohir.A06G210500' => 'ghi', 'Gohir.A08G008650' => 'ghi', 'Gohir.A09G072700' => 'ghi', 'Gohir.A09G088301' => 'ghi', 'Gohir.A10G040600' => 'ghi', 'Gohir.A12G036300' => 'ghi', 'Gohir.A12G143350' => 'ghi', 'Gohir.A12G165500' => 'ghi', 'Gohir.A13G145700' => 'ghi', 'Gohir.D01G050000' => 'ghi', 'Gohir.D01G051366' => 'ghi', 'Gohir.D01G161350' => 'ghi', 'Gohir.D02G065900' => 'ghi', 'Gohir.D05G164200' => 'ghi', 'Gohir.D05G355500' => 'ghi', 'Gohir.D06G010400' => 'ghi', 'Gohir.D06G111250' => 'ghi', 'Gohir.D06G132000' => 'ghi', 'Gohir.D06G210500' => 'ghi', 'Gohir.D07G165675' => 'ghi', 'Gohir.D08G062240' => 'ghi', 'Gohir.D08G086101' => 'ghi', 'Gohir.D08G138060' => 'ghi', 'Gohir.D09G072300' => 'ghi', 'Gohir.D10G041400' => 'ghi', 'Gohir.D11G191020' => 'ghi', 'Gohir.D11G212066' => 'ghi', 'Gohir.D12G036300' => 'ghi', 'Gohir.D12G168600' => 'ghi', 'Gohir.D13G150600' => 'ghi', 'Gorai.001G057300' => 'gra', 'Gorai.002G069900' => 'gra', 'Gorai.002G200000' => 'gra', 'Gorai.003G067600' => 'gra', 'Gorai.005G074800' => 'gra', 'Gorai.006G087300' => 'gra', 'Gorai.008G037500' => 'gra', 'Gorai.008G181400' => 'gra', 'Gorai.009G169400' => 'gra', 'Gorai.009G387900' => 'gra', 'Gorai.010G013300' => 'gra', 'Gorai.010G153800' => 'gra', 'Gorai.010G255800' => 'gra', 'Gorai.011G043700' => 'gra', 'Gorai.011G198900' => 'gra', 'Gorai.013G168400' => 'gra', 'GSVIVG01005212001' => 'vvi', 'GSVIVG01006163001' => 'vvi', 'GSVIVG01009625001' => 'vvi', 'GSVIVG01014338001' => 'vvi', 'GSVIVG01020005001' => 'vvi', 'GSVIVG01021450001' => 'vvi', 'GSVIVG01023975001' => 'vvi', 'GSVIVG01034490001' => 'vvi', 'HanXRQChr04g0112071' => 'han', 'HanXRQChr05g0131151' => 'han', 'HanXRQChr09g0262371' => 'han', 'HanXRQChr09g0268401' => 'han', 'HanXRQChr10g0279241' => 'han', 'HanXRQChr10g0297961' => 'han', 'HanXRQChr11g0326231' => 'han', 'HanXRQChr11g0328471' => 'han', 'HanXRQChr16g0507941' => 'han', 'HanXRQChr17g0560211' => 'han', 'Haze_02108' => 'cav', 'Haze_02428' => 'cav', 'Haze_05593' => 'cav', 'Haze_06448' => 'cav', 'Haze_09427' => 'cav', 'Haze_12022' => 'cav', 'Haze_17612' => 'cav', 'Haze_17928' => 'cav', 'Hma1.2p1_0032F.1_g019250' => 'hma', 'Hma1.2p1_0163F.1_g072690' => 'hma', 'Hma1.2p1_0265F.1_g106710' => 'hma', 'Hma1.2p1_0286F.1_g113970' => 'hma', 'Hma1.2p1_0363F.1_g136640' => 'hma', 'Hma1.2p1_0584F.1_g183470' => 'hma', 'Hma1.2p1_0885F.1_g232570' => 'hma', 'HPP92_006022' => 'vpl', 'HPP92_007320' => 'vpl', 'HPP92_011521' => 'vpl', 'HPP92_019387' => 'vpl', 'HPP92_024038' => 'vpl', 'Hund05891' => 'sun', 'Hund06450' => 'sun', 'Hund12053' => 'sun', 'Hund16800' => 'sun', 'Hund21222' => 'sun', 'Hund22896' => 'sun', 'Hund23746' => 'sun', 'Hund27083' => 'sun', 'Lalb_Chr02g0141831' => 'lal', 'Lalb_Chr02g0141841' => 'lal', 'Lalb_Chr05g0220411' => 'lal', 'Lalb_Chr06g0162081' => 'lal', 'Lalb_Chr09g0327651' => 'lal', 'Lalb_Chr13g0295051' => 'lal', 'Lalb_Chr15g0086801' => 'lal', 'Lalb_Chr16g0383781' => 'lal', 'Lalb_Chr16g0383791' => 'lal', 'Lalb_Chr18g0055441' => 'lal', 'Lalb_Chr18g0059611' => 'lal', 'Lalb_Chr20g0109661' => 'lal', 'Lalb_Chr20g0109831' => 'lal', 'Lalb_Chr20g0121871' => 'lal', 'Lalb_Chr22g0355361' => 'lal', 'Lalb_Chr25g0286371' => 'lal', 'Lj1A1187G43' => 'lonja', 'Lj1A1205T50' => 'lonja', 'Lj1A800G33' => 'lonja', 'Lj1C1187T7' => 'lonja', 'Lj1C843T11' => 'lonja', 'Lj1g0010940' => 'lja', 'Lj2A288T69' => 'lonja', 'Lj3g0024276' => 'lja', 'Lj4A47T76' => 'lonja', 'Lj4g0005805' => 'lja', 'Lj4g0006097' => 'lja', 'Lj4g0008528' => 'lja', 'Lj4g0024907' => 'lja', 'Lj5g0012472' => 'lja', 'Lj5g0018648' => 'lja', 'Lj6C789G1' => 'lonja', 'Lj6g0004000' => 'lja', 'Lj7A292G67' => 'lonja', 'Lj7A292T64' => 'lonja', 'Lj9A400T58' => 'lonja', 'Lsat_1_v5_gn_1_126181' => 'lsa', 'Lsat_1_v5_gn_4_123041' => 'lsa', 'Lsat_1_v5_gn_4_133620' => 'lsa', 'Lsat_1_v5_gn_4_53221' => 'lsa', 'Lsat_1_v5_gn_4_71961' => 'lsa', 'Lsat_1_v5_gn_7_105241' => 'lsa', 'Lsat_1_v5_gn_7_21361' => 'lsa', 'Lsat_1_v5_gn_7_28860' => 'lsa', 'Lsat_1_v5_gn_7_31260' => 'lsa', 'Lsat_1_v5_gn_8_52801' => 'lsa', 'Manes.02G191400' => 'mes', 'Manes.03G110100' => 'mes', 'Manes.04G071100' => 'mes', 'Manes.05G100500' => 'mes', 'Manes.05G164700' => 'mes', 'Manes.15G087000' => 'mes', 'Manes.15G121500' => 'mes', 'Manes.16G028300' => 'mes', 'Manes.17G046100' => 'mes', 'Manes.17G069800' => 'mes', 'Manes.18G100500' => 'mes', 'Mapoly0002s0109' => 'mpo', 'Mapoly0024s0007' => 'mpo', 'Mapoly0089s0032' => 'mpo', 'MBI04_g42241_MAGBIO' => 'mbi', 'MBI05_g11988_MAGBIO' => 'mbi', 'MBI05_g35452_MAGBIO' => 'mbi', 'MBI07_g30179_MAGBIO' => 'mbi', 'MBI07_g35859_MAGBIO' => 'mbi', 'MBI07_g35860_MAGBIO' => 'mbi', 'MBI07_g37166_MAGBIO' => 'mbi', 'MBI08_g18172_MAGBIO' => 'mbi', 'MBI09_g08441_MAGBIO' => 'mbi', 'MBI13_g01676_MAGBIO' => 'mbi', 'MBI14_g42955_MAGBIO' => 'mbi', 'MBI16_g13161_MAGBIO' => 'mbi', 'MBI17_g27204_MAGBIO' => 'mbi', 'MBI19_g21595_MAGBIO' => 'mbi', 'MD00G1148400' => 'mdo', 'MD02G1301200' => 'mdo', 'MD03G1227800' => 'mdo', 'MD05G1041100' => 'mdo', 'MD05G1124800' => 'mdo', 'MD05G1284000' => 'mdo', 'MD05G1338800' => 'mdo', 'MD05G1338900' => 'mdo', 'MD07G1022800' => 'mdo', 'MD10G1047500' => 'mdo', 'MD10G1127500' => 'mdo', 'MD10G1262300' => 'mdo', 'MD10G1293800' => 'mdo', 'MD16G1074300' => 'mdo', 'Medtr1g021670' => 'mtr', 'Medtr1g096320' => 'mtr', 'Medtr2g013690' => 'mtr', 'Medtr2g019450' => 'mtr', 'Medtr2g085170' => 'mtr', 'Medtr4g088785' => 'mtr', 'Medtr8g055930' => 'mtr', 'Medtr8g085850' => 'mtr', 'MELO3C002605.2' => 'cme', 'MELO3C003891.2' => 'cme', 'MELO3C004012.2' => 'cme', 'MELO3C007134.2' => 'cme', 'MELO3C008118.2' => 'cme', 'MELO3C016700.2' => 'cme', 'MELO3C024127.2' => 'cme', 'MELO3C033361.2' => 'cme', 'MELO3C033362.2' => 'cme', 'Migut.C00430' => 'egut', 'Migut.C01246' => 'egut', 'Migut.E00101' => 'egut', 'Migut.H01486' => 'egut', 'Migut.H01939' => 'egut', 'Migut.K00360' => 'egut', 'Migut.M00910' => 'egut', 'Migut.M01139' => 'egut', 'Migut.N02677' => 'egut', 'MSTRG.13252' => 'ama', 'MSTRG.14701' => 'ama', 'MSTRG.1521' => 'ama', 'MSTRG.15884' => 'ama', 'MSTRG.16242' => 'ama', 'MSTRG.22285' => 'ama', 'MSTRG.22444' => 'ama', 'MSTRG.2349' => 'ama', 'MSTRG.26308' => 'ama', 'MSTRG.28296' => 'ama', 'MSTRG.9895' => 'ama', 'Nitab4.5_0000110g0060' => 'nta', 'Nitab4.5_0000420g0130' => 'nta', 'Nitab4.5_0000422g0030' => 'nta', 'Nitab4.5_0000560g0180' => 'nta', 'Nitab4.5_0000703g0100' => 'nta', 'Nitab4.5_0000786g0200' => 'nta', 'Nitab4.5_0001336g0020' => 'nta', 'Nitab4.5_0001796g0030' => 'nta', 'Nitab4.5_0003348g0060' => 'nta', 'Nitab4.5_0003698g0040' => 'nta', 'Nitab4.5_0003942g0090' => 'nta', 'Nitab4.5_0004775g0070' => 'nta', 'Nitab4.5_0004864g0030' => 'nta', 'Nitab4.5_0005615g0020' => 'nta', 'Nitab4.5_0009288g0030' => 'nta', 'Nitab4.5_0009341g0010' => 'nta', 'Nitab4.5_0009535g0010' => 'nta', 'Nn1g03995' => 'nnu', 'Nn1g04100' => 'nnu', 'Nn1g06530' => 'nnu', 'Nn3g16404' => 'nnu', 'Nn3g17212' => 'nnu', 'Nn3g20776' => 'nnu', 'Nn3g21923' => 'nnu', 'Nn5g27737' => 'nnu', 'Nn5g29461' => 'nnu', 'Nn7g38355' => 'nnu', 'Nn8g39873' => 'nnu', 'Oeu000548.2' => 'oeu', 'Oeu004672.1' => 'oeu', 'Oeu015605.2' => 'oeu', 'Oeu016092.1' => 'oeu', 'Oeu017879.3' => 'oeu', 'Oeu024910.1' => 'oeu', 'Oeu028965.1' => 'oeu', 'Oeu031269.1' => 'oeu', 'Oeu031270.1' => 'oeu', 'Oeu032535.1' => 'oeu', 'Oeu034151.1' => 'oeu', 'Oeu034152.1' => 'oeu', 'Oeu034588.2' => 'oeu', 'Oeu050846.1' => 'oeu', 'Oeu050849.2' => 'oeu', 'Oeu051063.2' => 'oeu', 'Oeu052368.1' => 'oeu', 'Oeu052370.1' => 'oeu', 'Os01g0210400' => 'osa', 'Os01g0304300' => 'osa', 'Os01g0749100' => 'osa', 'Os02g0745800' => 'osa', 'Os03g0769050' => 'osa', 'Os05g0531500' => 'osa', 'Os06g0724300' => 'osa', 'Os11g0198100' => 'osa', 'Peaxi162Scf00069g01425' => 'pax', 'Peaxi162Scf00280g00811' => 'pax', 'Peaxi162Scf00310g00615' => 'pax', 'Peaxi162Scf00362g00542' => 'pax', 'Peaxi162Scf00461g00310' => 'pax', 'Peaxi162Scf00530g00118' => 'pax', 'Peaxi162Scf00541g00057' => 'pax', 'Peaxi162Scf00661g00017' => 'pax', 'Peaxi162Scf00926g00027' => 'pax', 'Peaxi162Scf01064g00263' => 'pax', 'Peaxi162Scf01211g00135' => 'pax', 'PGR004G2336' => 'pgr', 'PGR042G0327' => 'pgr', 'PGR042G1957' => 'pgr', 'PGR042G2003' => 'pgr', 'PGR042G3929' => 'pgr', 'PGR083G1137' => 'pgr', 'PGR083G1364' => 'pgr', 'PGSC0003DMG400003381' => 'stu', 'PGSC0003DMG400003417' => 'stu', 'PGSC0003DMG400008981' => 'stu', 'PGSC0003DMG400012417' => 'stu', 'PGSC0003DMG400012823' => 'stu', 'PGSC0003DMG400016885' => 'stu', 'PGSC0003DMG400022812' => 'stu', 'PGSC0003DMG400029726' => 'stu', 'PGSC0003DMG401009243' => 'stu', 'PGSC0003DMG401031505' => 'stu', 'PGSC0003DMG402031505' => 'stu', 'Phvul.001G017600' => 'pvu', 'Phvul.002G193500' => 'pvu', 'Phvul.002G228900' => 'pvu', 'Phvul.002G236800' => 'pvu', 'Phvul.003G049500' => 'pvu', 'Phvul.005G072000' => 'pvu', 'Phvul.006G164800' => 'pvu', 'Phvul.006G185100' => 'pvu', 'Phvul.007G090000' => 'pvu', 'Potri.001G399800' => 'ptr', 'Potri.002G149900' => 'ptr', 'Potri.004G044100' => 'ptr', 'Potri.004G177600' => 'ptr', 'Potri.009G138000' => 'ptr', 'Potri.010G094000' => 'ptr', 'Potri.011G053000' => 'ptr', 'Potri.011G119300' => 'ptr', 'Potri.013G113700' => 'ptr', 'Potri.018G107800' => 'ptr', 'Potri.019G084100' => 'ptr', 'Pp3c14_23720' => 'ppa', 'Pp3c16_6340' => 'ppa', 'Pp3c23_13420' => 'ppa', 'Pp3c24_2740' => 'ppa', 'Pp3c25_860' => 'ppa', 'Pp3c8_21750' => 'ppa', 'Prupe.1G273000' => 'ppe', 'Prupe.1G273700' => 'ppe', 'Prupe.1G274100' => 'ppe', 'Prupe.2G023300' => 'ppe', 'Prupe.4G048000' => 'ppe', 'Prupe.4G080400' => 'ppe', 'Prupe.4G181200' => 'ppe', 'Prupe.8G056900' => 'ppe', 'Prupe.8G168700' => 'ppe', 'Psat1g189080' => 'psa', 'Psat1g204760' => 'psa', 'Psat4g175560' => 'psa', 'Psat4g177720' => 'psa', 'Psat5g244240' => 'psa', 'Psat6g010720' => 'psa', 'Psat6g187200' => 'psa', 'Psat7g072040' => 'psa', 'PSO017G3501' => 'pso', 'PSO063G2148' => 'pso', 'PSO063G5608' => 'pso', 'PSO210G6392' => 'pso', 'PSO541G2319' => 'pso', 'PSO541G2836' => 'pso', 'PSO541G4012' => 'pso', 'PSO541G6253' => 'pso', 'PSO675G0580' => 'pso', 'PSO675G0856' => 'pso', 'PSO675G5635' => 'pso', 'PSO675G9157' => 'pso', 'PSO832G1660' => 'pso', 'PSO832G1969' => 'pso', 'QL02p007186' => 'qlo', 'QL02p033904' => 'qlo', 'QL03p064391' => 'qlo', 'QL05p040593' => 'qlo', 'QL05p058242' => 'qlo', 'QL08p021825' => 'qlo', 'QL11p004981' => 'qlo', 'RcHm_v2.0_Chr1g0318301' => 'rch', 'RcHm_v2.0_Chr4g0418501' => 'rch', 'RcHm_v2.0_Chr4g0439971' => 'rch', 'RcHm_v2.0_Chr5g0008541' => 'rch', 'RcHm_v2.0_Chr5g0014101' => 'rch', 'RcHm_v2.0_Chr5g0014131' => 'rch', 'RcHm_v2.0_Chr5g0033621' => 'rch', 'RcHm_v2.0_Chr6g0272041' => 'rch', 'RcHm_v2.0_Chr6g0278831' => 'rch', 'Rhsim02G0130400' => 'rsi', 'Rhsim02G0171100' => 'rsi', 'Rhsim05G0053000' => 'rsi', 'Rhsim05G0053100' => 'rsi', 'Rhsim06G0096500' => 'rsi', 'Rhsim06G0096600' => 'rsi', 'Rhsim06G0199100' => 'rsi', 'Rhsim12G0062300' => 'rsi', 'Rhsim12G0062800' => 'rsi', 'Sabra02G0118600' => 'sbr', 'Sabra04G0027300' => 'sbr', 'Sabra04G0119500' => 'sbr', 'Sabra08G0112500' => 'sbr', 'Sabra11G0036800' => 'sbr', 'Sabra11G0103800' => 'sbr', 'Sabra13G0096300' => 'sbr', 'Sabra16G0262300' => 'sbr', 'Sabra18G0091700' => 'sbr', 'Sabra19G0095400' => 'sbr', 'SalBow6G3080' => 'sbo', 'SalBow7G1157' => 'sbo', 'SalBow7G2123' => 'sbo', 'SalBow7G2285' => 'sbo', 'SalBow7G3537' => 'sbo', 'SalBow8G2947' => 'sbo', 'SalBow8G4463' => 'sbo', 'SalBow8G5466' => 'sbo', 'Sc01g0001750' => 'sci', 'Sc02g0006640' => 'sci', 'Sc02g0006670' => 'sci', 'Sc04g0008220' => 'sci', 'Sc05g0006190' => 'sci', 'Sc08g0002760' => 'sci', 'Sc17g0006170' => 'sci', 'Sc22g0002050' => 'sci', 'Sc23g0001190' => 'sci', 'Sc24g0000980' => 'sci', 'Sed0006245' => 'sed', 'Sed0007543' => 'sed', 'Sed0009411' => 'sed', 'Sed0010765' => 'sed', 'Sed0012944' => 'sed', 'Sed0014682' => 'sed', 'Sed0016174' => 'sed', 'Sed0016796' => 'sed', 'Sed0020317' => 'sed', 'Sed0021467' => 'sed', 'SEGI_01316' => 'sgi', 'SEGI_03374' => 'sgi', 'SEGI_16265' => 'sgi', 'SEGI_18569' => 'sgi', 'SEGI_20351' => 'sgi', 'SEGI_26395' => 'sgi', 'SEGI_29469' => 'sgi', 'SEGI_34771' => 'sgi', 'SEGI_36769' => 'sgi', 'SEGI_37139' => 'sgi', 'SGA_v2.0_scaffold100G29687' => 'sas', 'SGA_v2.0_scaffold118G32472' => 'sas', 'SGA_v2.0_scaffold14G07051' => 'sas', 'SGA_v2.0_scaffold183G39845' => 'sas', 'SGA_v2.0_scaffold1G00174' => 'sas', 'SGA_v2.0_scaffold22G09714' => 'sas', 'SGA_v2.0_scaffold333G48992' => 'sas', 'SGA_v2.0_scaffold46G17491' => 'sas', 'SGA_v2.0_scaffold49G18294' => 'sas', 'SGA_v2.0_scaffold63G21658' => 'sas', 'SHI01741' => 'shi', 'SHI05771' => 'shi', 'SHI18077' => 'shi', 'SHI20525' => 'shi', 'SHI20527' => 'shi', 'SHI20528' => 'shi', 'SMO172G0185' => 'smo', 'SMO198G0020' => 'smo', 'SMO351G0006' => 'smo', 'SMO356G0118' => 'smo', 'SMO358G0296' => 'smo', 'SMO367G0079' => 'smo', 'SMO367G1277' => 'smo', 'Solyc01g014220.3' => 'sly', 'Solyc01g111770.2' => 'sly', 'Solyc02g078180.3' => 'sly', 'Solyc03g006430.3' => 'sly', 'Solyc03g006456.1' => 'sly', 'Solyc03g079860.2' => 'sly', 'Solyc04g079770.3' => 'sly', 'Solyc05g007430.4' => 'sly', 'Solyc07g063150.3' => 'sly', 'Solyc08g016620.3' => 'sly', 'Solyc09g057590.3' => 'sly', 'Solyc09g057600.1' => 'sly', 'Solyc10g009050.3' => 'sly', 'Solyc11g017420.2' => 'sly', 'Sopen01g053810' => 'spe', 'Sopen02g023040' => 'spe', 'Sopen03g002440' => 'spe', 'Sopen04g033350' => 'spe', 'Sopen05g003310' => 'spe', 'Sopen07g004050' => 'spe', 'Sopen07g031340' => 'spe', 'Sopen08g006990' => 'spe', 'Sopen10g004830' => 'spe', 'Sopen11g009370' => 'spe', 'Sp1g24450' => 'spa', 'Sp1g29670' => 'spa', 'Sp1g39600' => 'spa', 'Sp2g11080' => 'spa', 'Sp2g13970' => 'spa', 'Sp4g16130' => 'spa', 'Sp6g13080' => 'spa', 'Sp7g37270' => 'spa', 'TAR371G0065' => 'tar', 'TAR376G0340' => 'tar', 'TAR376G0435' => 'tar', 'TAR381G0002' => 'tar', 'TAR381G1236' => 'tar', 'TAR624G0055' => 'tar', 'TAR624G0324' => 'tar', 'TAR624G0696' => 'tar', 'TAR624G0906' => 'tar', 'TAR625G0107' => 'tar', 'TAR626G0015' => 'tar', 'TAR626G1356' => 'tar', 'TAR627G0888' => 'tar', 'TAR628G0399' => 'tar', 'TAR628G1327' => 'tar', 'TAR629G2831' => 'tar', 'TAR629G2874' => 'tar', 'TAR633G1432' => 'tar', 'TAR633G2771' => 'tar', 'THA.LOC104803394' => 'tha', 'THA.LOC104805153' => 'tha', 'THA.LOC104806784' => 'tha', 'THA.LOC104810473' => 'tha', 'THA.LOC104813100' => 'tha', 'THA.LOC104814215' => 'tha', 'THA.LOC104815554' => 'tha', 'THA.LOC104820544' => 'tha', 'THA.LOC104824754' => 'tha', 'THA.LOC104827717' => 'tha', 'Thecc.02G031400' => 'tca', 'Thecc.02G055900' => 'tca', 'Thecc.02G350800' => 'tca', 'Thecc.06G150900' => 'tca', 'Thecc.06G186600' => 'tca', 'Thecc.07G089600' => 'tca', 'Thecc.08G020400' => 'tca', 'Thecc.08G182100' => 'tca', 'Thhalv10000873m.g' => 'esa', 'Thhalv10004185m.g' => 'esa', 'Thhalv10006981m.g' => 'esa', 'Thhalv10007204m.g' => 'esa', 'Thhalv10011374m.g' => 'esa', 'Thhalv10013482m.g' => 'esa', 'Thhalv10017801m.g' => 'esa', 'Thhalv10024983m.g' => 'esa', 'TPR.G12072' => 'tpr', 'TPR.G15769' => 'tpr', 'TPR.G16504' => 'tpr', 'TPR.G16506' => 'tpr', 'TPR.G24345' => 'tpr', 'TPR.G26666' => 'tpr', 'TPR.G27320' => 'tpr', 'TPR.G31819' => 'tpr', 'TPR.G38879' => 'tpr', 'TPR.G39015' => 'tpr', 'TPR.G8819' => 'tpr', 'TWI09G0924' => 'twi', 'TWI12G0811' => 'twi', 'TWI12G1294' => 'twi', 'TWI31G0150' => 'twi', 'TWI36G1262' => 'twi', 'TWI38G1287' => 'twi', 'TWI38G1633' => 'twi', 'TWI38G1982' => 'twi', 'TWI39G0116' => 'twi', 'TWI60G1011' => 'twi', 'TWI63G0171' => 'twi', 'TWI73G0839' => 'twi', 'TWI79G1511' => 'twi', 'unitig_0.g915' => 'ugi', 'unitig_0.g916' => 'ugi', 'unitig_21.g20219' => 'ugi', 'unitig_21.g20416' => 'ugi', 'unitig_578.g16132' => 'ugi', 'unitig_578.g16718' => 'ugi', 'unitig_62.g23481' => 'ugi', 'unitig_744.g24535' => 'ugi', 'unitig_749.g13525' => 'ugi', 'vmacro01248' => 'vma', 'vmacro02290' => 'vma', 'vmacro10946' => 'vma', 'vmacro11865' => 'vma', 'vmacro12493' => 'vma', 'vmacro17322' => 'vma', 'vmacro21599' => 'vma', 'vmacro23041' => 'vma', 'VMungo0251G0004' => 'vmu', 'VMungo0251G2639' => 'vmu', 'VMungo0251G2967' => 'vmu', 'VMungo0540G0864' => 'vmu', 'VMungo0540G1569' => 'vmu', 'VMungo0647G0317' => 'vmu', 'VMungo0720G1373' => 'vmu', 'VMungo0720G1508' => 'vmu', 'VMungo1080G0485' => 'vmu', 'VMungo1215G3177' => 'vmu', 'Zm00001eb112600' => 'zma', 'Zm00001eb120220' => 'zma', 'Zm00001eb153240' => 'zma', 'Zm00001eb168880' => 'zma', 'Zm00001eb213920' => 'zma', 'Zm00001eb228280' => 'zma', 'Zm00001eb254580' => 'zma', 'Zm00001eb272180' => 'zma', 'Zm00001eb293190' => 'zma', 'Zm00001eb322930' => 'zma', 'Zm00001eb353360' => 'zma', 'Zm00001eb353390' => 'zma', 'Zm00001eb353430' => 'zma', 'Zm00001eb353440' => 'zma', 'Zm00001eb353780' => 'zma' ), 'gf_id' => 'HOM05D000499', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000499' ), 'data_identifier' => 'HOM05D000499', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000499', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1066', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p29780' => 'bna', 'A02p33180' => 'bna', 'A03p16470' => 'bna', 'A03p66010' => 'bna', 'A04p25970' => 'bna', 'A06p01270' => 'bna', 'A06p46080' => 'bna', 'A07p11400' => 'bna', 'A08p01840' => 'bna', 'A08p08230' => 'bna', 'A08p25740' => 'bna', 'A09p32070' => 'bna', 'A09p37830' => 'bna', 'A09p42840' => 'bna', 'A09p42850' => 'bna', 'Aa31LG10G2060' => 'aar', 'Aa31LG2G7410' => 'aar', 'Aa31LG6G10200' => 'aar', 'Aa31LG6G16680' => 'aar', 'Aa31LG6G8470' => 'aar', 'Aa31LG9G12730' => 'aar', 'Aa31LG9G13680' => 'aar', 'Aa31LG9G14920' => 'aar', 'Aa31LG9G6650' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4977' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5467' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3254' => 'aag', 'Actinidia02578' => 'ach', 'Actinidia07693' => 'ach', 'Actinidia08413' => 'ach', 'Actinidia08414' => 'ach', 'Actinidia15289' => 'ach', 'Actinidia19871' => 'ach', 'Actinidia21475' => 'ach', 'Actinidia22576' => 'ach', 'Actinidia28327' => 'ach', 'Actinidia32491' => 'ach', 'Actinidia39463' => 'ach', 'Actinidia39571' => 'ach', 'Ah.01g013750' => 'amhyb', 'Ah.01g023210' => 'amhyb', 'Ah.04g164850' => 'amhyb', 'Ah.05g178060' => 'amhyb', 'Ah.07g204270' => 'amhyb', 'Ah.07g208480' => 'amhyb', 'Ah.09g237410' => 'amhyb', 'Ah.14g089460' => 'amhyb', 'AL1G41790' => 'aly', 'AL1G49050' => 'aly', 'AL1G53810' => 'aly', 'AL1G61400' => 'aly', 'AL4G18580' => 'aly', 'AL5G12510' => 'aly', 'AL5G12540' => 'aly', 'AL6G43230' => 'aly', 'AL7G10370' => 'aly', 'AL7G19250' => 'aly', 'AL8G12240' => 'aly', 'AL8G18540' => 'aly', 'Aqoxy1G02409' => 'aox', 'Aqoxy2G03993' => 'aox', 'Aqoxy3G03357' => 'aox', 'Aqoxy4G00785' => 'aox', 'Aqoxy5G02598' => 'aox', 'Aqoxy6G00132' => 'aox', 'Aqoxy7G01776' => 'aox', 'Aqoxy7G02316' => 'aox', 'Aqoxy7G03973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.12AFKW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B8730' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27IQR1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3F75VG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3RE0GA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41TCQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.527VTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FIR39' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5W8UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DA38EV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ63HS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H1I32C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HC27T5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4M8AP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7N3CZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9UVDZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LS1NQA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT1D4B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SKC4TM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCFV76' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF9Q1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQWD9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1ZM88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WE07RT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YCK7VH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJE6Q6' => 'arhy', 'AT1G28240' => 'ath', 'AT1G34550' => 'ath', 'AT1G53040' => 'ath', 'AT2G02910' => 'ath', 'AT4G09630' => 'ath', 'AT4G38500' => 'ath', 'AT5G42660' => 'ath', 'AT5G46220' => 'ath', 'ATR0152G026' => 'atr', 'ATR0564G343' => 'atr', 'ATR0706G151' => 'atr', 'ATR0733G207' => 'atr', 'ATR0751G234' => 'atr', 'ATR0807G048' => 'atr', 'ATR1091G084' => 'atr', 'Atru.chr10.1229' => 'acertr', 'Atru.chr10.1230' => 'acertr', 'Atru.chr10.1874' => 'acertr', 'Atru.chr11.1808' => 'acertr', 'Atru.chr13.1795' => 'acertr', 'Atru.chr13.570' => 'acertr', 'Atru.chr2.2608' => 'acertr', 'Atru.chr2.2609' => 'acertr', 'Atru.chr5.3428' => 'acertr', 'Atru.chr8.1171' => 'acertr', 'AUR62004651' => 'cqu', 'AUR62008675' => 'cqu', 'AUR62010014' => 'cqu', 'AUR62013004' => 'cqu', 'AUR62014825' => 'cqu', 'AUR62015015' => 'cqu', 'AUR62015151' => 'cqu', 'AUR62017020' => 'cqu', 'AUR62019422' => 'cqu', 'AUR62023570' => 'cqu', 'AUR62025571' => 'cqu', 'AUR62029098' => 'cqu', 'AUR62033863' => 'cqu', 'AUR62034296' => 'cqu', 'AUR62040075' => 'cqu', 'BcaB02g07334' => 'bca', 'BcaB02g10575' => 'bca', 'BcaB03g12119' => 'bca', 'BcaB03g12120' => 'bca', 'BcaB03g13945' => 'bca', 'BcaB04g17123' => 'bca', 'BcaB04g17867' => 'bca', 'BcaB04g19839' => 'bca', 'BcaB07g30317' => 'bca', 'BcaB07g32432' => 'bca', 'BcaB07g33362' => 'bca', 'BcaB08g36611' => 'bca', 'BcaC01g00028' => 'bca', 'BcaC01g01356' => 'bca', 'BcaC01g02034' => 'bca', 'BcaC01g06051' => 'bca', 'BcaC03g16839' => 'bca', 'BcaC03g17176' => 'bca', 'BcaC05g26829' => 'bca', 'BcaC06g31490' => 'bca', 'BcaC06g35344' => 'bca', 'BcaC06g36570' => 'bca', 'BcaC07g37537' => 'bca', 'BcaC08g43491' => 'bca', 'BcaC08g43773' => 'bca', 'BcaNung00234' => 'bca', 'BcaNung01982' => 'bca', 'BcaNung03707' => 'bca', 'BcaNung06454' => 'bca', 'BolC2t10762H' => 'bol', 'BolC2t11191H' => 'bol', 'BolC3t14322H' => 'bol', 'BolC3t19747H' => 'bol', 'BolC3t21425H' => 'bol', 'BolC4t27800H' => 'bol', 'BolC5t31423H' => 'bol', 'BolC6t35951H' => 'bol', 'BolC6t36282H' => 'bol', 'BolC7t40678H' => 'bol', 'BolC7t40679H' => 'bol', 'BolC7t42222H' => 'bol', 'BolC7t43492H' => 'bol', 'BolC7t46785H' => 'bol', 'BolC8t47853H' => 'bol', 'BolC9t56805H' => 'bol', 'BraA02t08000Z' => 'bra', 'BraA02t08341Z' => 'bra', 'BraA03t10936Z' => 'bra', 'BraA03t15657Z' => 'bra', 'BraA04t18100Z' => 'bra', 'BraA05t20523Z' => 'bra', 'BraA06t23353Z' => 'bra', 'BraA06t27473Z' => 'bra', 'BraA06t27769Z' => 'bra', 'BraA07t28928Z' => 'bra', 'BraA08t32236Z' => 'bra', 'BraA08t32841Z' => 'bra', 'BraA08t34524Z' => 'bra', 'BraA09t38742Z' => 'bra', 'BraA09t39295Z' => 'bra', 'C02p47180' => 'bna', 'C02p50990' => 'bna', 'C03p19360' => 'bna', 'C03p74950' => 'bna', 'C03p91000' => 'bna', 'C04p63260' => 'bna', 'C05p27050' => 'bna', 'C06p08750' => 'bna', 'C06p11490' => 'bna', 'C07p02820' => 'bna', 'C07p17180' => 'bna', 'C07p29440' => 'bna', 'C07p63730' => 'bna', 'C09p39260' => 'bna', 'CAN.G1164.34' => 'can', 'CAN.G1164.39' => 'can', 'CAN.G1530.3' => 'can', 'CAN.G162.61' => 'can', 'CAN.G176.6' => 'can', 'CAN.G289.49' => 'can', 'CAN.G370.21' => 'can', 'CAN.G370.22' => 'can', 'CAN.G371.117' => 'can', 'CAN.G58.37' => 'can', 'CAN.G588.98' => 'can', 'CANSAT21G2266' => 'cansat', 'CANSAT25G2799' => 'cansat', 'CANSAT35G0862' => 'cansat', 'CANSAT35G1704' => 'cansat', 'CANSAT35G1760' => 'cansat', 'CANSAT56G3971' => 'cansat', 'CANSAT56G4116' => 'cansat', 'CANSAT80G1259' => 'cansat', 'CARHR027730' => 'chi', 'CARHR033880' => 'chi', 'CARHR043270' => 'chi', 'CARHR145330' => 'chi', 'CARHR145340' => 'chi', 'CARHR175570' => 'chi', 'CARHR181570' => 'chi', 'CARHR258470' => 'chi', 'CARHR260490' => 'chi', 'CARHR294220' => 'chi', 'Carub.0001s2668' => 'cru', 'Carub.0001s3257' => 'cru', 'Carub.0001s4220' => 'cru', 'Carub.0005s0179' => 'cru', 'Carub.0006s2807' => 'cru', 'Carub.0007s0039' => 'cru', 'Carub.0008s0169' => 'cru', 'Carub.0008s0636' => 'cru', 'Ca_00338_v3' => 'car', 'Ca_00542_v3' => 'car', 'Ca_01844_v3' => 'car', 'Ca_10611_v3' => 'car', 'Ca_13326_v3' => 'car', 'Ca_17944_v3' => 'car', 'Ca_18546_v3' => 'car', 'Ca_24219_v3' => 'car', 'Ca_29972_v3' => 'car', 'CBR_g3681' => 'cbr', 'CBR_g40021' => 'cbr', 'Cc01_g08140' => 'ccan', 'Cc02_g13410' => 'ccan', 'Cc02_g37480' => 'ccan', 'Cc05_g12030' => 'ccan', 'Cc09_g03370' => 'ccan', 'Cc09_g10300' => 'ccan', 'Cc10_g03530' => 'ccan', 'Cc10_g11380' => 'ccan', 'CDE01G0176' => 'cde', 'CDE02G0675' => 'cde', 'CDE02G0942' => 'cde', 'CDE02G1153' => 'cde', 'CDE02G4177' => 'cde', 'CDE04G2117' => 'cde', 'CDE04G2736' => 'cde', 'CDE08G1161' => 'cde', 'CDE09G1238' => 'cde', 'Cfa000467' => 'cfa', 'Cfa000947' => 'cfa', 'Cfa004969' => 'cfa', 'Cfa005284' => 'cfa', 'Cfa008993' => 'cfa', 'Cfa018187' => 'cfa', 'Cfa018454' => 'cfa', 'Cfa020585' => 'cfa', 'Ciclev10000424m.g' => 'ccl', 'Ciclev10003605m.g' => 'ccl', 'Ciclev10007828m.g' => 'ccl', 'Ciclev10014620m.g' => 'ccl', 'Ciclev10015169m.g' => 'ccl', 'Ciclev10018291m.g' => 'ccl', 'Ciclev10028256m.g' => 'ccl', 'Ciclev10033822m.g' => 'ccl', 'CiPaw.05G060300' => 'cil', 'CiPaw.05G085000' => 'cil', 'CiPaw.06G083700' => 'cil', 'CiPaw.06G120300' => 'cil', 'CiPaw.09G060500' => 'cil', 'CiPaw.09G123800' => 'cil', 'CiPaw.11G169700' => 'cil', 'CiPaw.12G118300' => 'cil', 'CiPaw.15G071000' => 'cil', 'CiPaw.15G081900' => 'cil', 'ClCG01G024610' => 'cla', 'ClCG03G006070' => 'cla', 'ClCG05G019250' => 'cla', 'ClCG09G009500' => 'cla', 'ClCG11G008200' => 'cla', 'ClCG11G018080' => 'cla', 'COL.COLO4_17373' => 'col', 'COL.COLO4_22994' => 'col', 'COL.COLO4_26389' => 'col', 'COL.COLO4_27170' => 'col', 'COL.COLO4_31074' => 'col', 'COL.COLO4_31465' => 'col', 'COL.COLO4_36438' => 'col', 'COL.COLO4_36439' => 'col', 'Cpa.g.c38781' => 'cpa', 'Cpa.g.sc128.12' => 'cpa', 'Cpa.g.sc166.7' => 'cpa', 'Cpa.g.sc166.8' => 'cpa', 'Cpa.g.sc20.111' => 'cpa', 'Cpa.g.sc27.31' => 'cpa', 'Cpa.g.sc64.36' => 'cpa', 'Cpa.g.sc64.37' => 'cpa', 'Cpa.g.sc66.49' => 'cpa', 'Cpa.g.sc80.64' => 'cpa', 'CsaV3_1G012320' => 'csa', 'CsaV3_2G008480' => 'csa', 'CsaV3_2G033450' => 'csa', 'CsaV3_3G044830' => 'csa', 'CsaV3_4G033710' => 'csa', 'CsaV3_6G051730' => 'csa', 'CsaV3_7G025350' => 'csa', 'CSS0001067' => 'camsi', 'CSS0005996' => 'camsi', 'CSS0006590' => 'camsi', 'CSS0009673' => 'camsi', 'CSS0010201' => 'camsi', 'CSS0010549' => 'camsi', 'CSS0011364' => 'camsi', 'CSS0014473' => 'camsi', 'CSS0014961' => 'camsi', 'CSS0020191' => 'camsi', 'CSS0021165' => 'camsi', 'CSS0022306' => 'camsi', 'CSS0030591' => 'camsi', 'CSS0030696' => 'camsi', 'CSS0032653' => 'camsi', 'CSS0037487' => 'camsi', 'CSS0041102' => 'camsi', 'CSS0041261' => 'camsi', 'CSS0046246' => 'camsi', 'CSS0049256' => 'camsi', 'DCAR_004075' => 'dca', 'DCAR_011538' => 'dca', 'DCAR_019553' => 'dca', 'DCAR_020952' => 'dca', 'DCAR_021739' => 'dca', 'DCAR_027407' => 'dca', 'DCAR_027913' => 'dca', 'DCAR_028066' => 'dca', 'Dinv05899' => 'din', 'Dinv07563' => 'din', 'Dinv08010' => 'din', 'Dinv14125' => 'din', 'Dinv20172' => 'din', 'Dinv30743' => 'din', 'Dinv31229' => 'din', 'Dinv34162' => 'din', 'Dinv36028' => 'din', 'Dinv39368' => 'din', 'Dinv40565' => 'din', 'Dinv41706' => 'din', 'Duzib052G0089' => 'dzi', 'Duzib116G0641' => 'dzi', 'Duzib132G0069' => 'dzi', 'Duzib132G1219' => 'dzi', 'Duzib147G0278' => 'dzi', 'Duzib160G0480' => 'dzi', 'Duzib170G0661' => 'dzi', 'Duzib177G0591' => 'dzi', 'Duzib187G1353' => 'dzi', 'Duzib192G0858' => 'dzi', 'Duzib192G0883' => 'dzi', 'Duzib213G0506' => 'dzi', 'Duzib235G0289' => 'dzi', 'Duzib251G0422' => 'dzi', 'ECA232G3898' => 'eca', 'ECA233G5950' => 'eca', 'ECA234G1699' => 'eca', 'ECA234G2421' => 'eca', 'ECA236G0426' => 'eca', 'ECA236G4331' => 'eca', 'ECA248G2573' => 'eca', 'EL10Ac1g00077' => 'bvu', 'EL10Ac1g01746' => 'bvu', 'EL10Ac2g03464' => 'bvu', 'EL10Ac4g08176' => 'bvu', 'EL10Ac7g17521' => 'bvu', 'EL10Ac8g20386' => 'bvu', 'EL10Ac9g21343' => 'bvu', 'EL10Ac9g22688' => 'bvu', 'Eucgr.B03434' => 'egr', 'Eucgr.D00618' => 'egr', 'Eucgr.E02395' => 'egr', 'Eucgr.F01129' => 'egr', 'Eucgr.F02622' => 'egr', 'Eucgr.F04207' => 'egr', 'FAN01G0570' => 'fan', 'FAN03G3351' => 'fan', 'FAN06G3702' => 'fan', 'FAN07G2149' => 'fan', 'FAN10G3758' => 'fan', 'FAN11G1170' => 'fan', 'FAN11G2050' => 'fan', 'FAN11G2724' => 'fan', 'FAN12G1700' => 'fan', 'FAN12G2028' => 'fan', 'FAN15G1160' => 'fan', 'FAN15G3063' => 'fan', 'FAN16G2540' => 'fan', 'FAN16G3077' => 'fan', 'FAN16G3624' => 'fan', 'FAN17G0221' => 'fan', 'FAN20G2492' => 'fan', 'FAN20G2905' => 'fan', 'FAN21G0548' => 'fan', 'FAN21G1300' => 'fan', 'FAN22G0077' => 'fan', 'FAN22G1315' => 'fan', 'FAN24G1280' => 'fan', 'FAN24G1445' => 'fan', 'FAN24G3527' => 'fan', 'FAN25G0464' => 'fan', 'FAN25G2885' => 'fan', 'FAN25G3270' => 'fan', 'FAN27G1101' => 'fan', 'FAN27G2846' => 'fan', 'FAN27G3524' => 'fan', 'FvH4_2g11770' => 'fve', 'FvH4_2g15630' => 'fve', 'FvH4_3g05570' => 'fve', 'FvH4_3g09110' => 'fve', 'FvH4_3g19940' => 'fve', 'FvH4_4g04821' => 'fve', 'FvH4_4g31480' => 'fve', 'FvH4_7g01740' => 'fve', 'Glyma.05G130400' => 'gma', 'Glyma.05G156400' => 'gma', 'Glyma.07G197000' => 'gma', 'Glyma.08G085151' => 'gma', 'Glyma.08G114500' => 'gma', 'Glyma.08G300400' => 'gma', 'Glyma.10G215800' => 'gma', 'Glyma.12G224400' => 'gma', 'Glyma.13G179300' => 'gma', 'Glyma.13G218151' => 'gma', 'Glyma.13G238800' => 'gma', 'Glyma.13G276900' => 'gma', 'Glyma.14G078200' => 'gma', 'Glyma.15G074500' => 'gma', 'Glyma.15G094100' => 'gma', 'Glyma.17G247200' => 'gma', 'Glyma.18G120100' => 'gma', 'Glyma.20G176000' => 'gma', 'Gohir.A01G063600' => 'ghi', 'Gohir.A01G170301' => 'ghi', 'Gohir.A02G060500' => 'ghi', 'Gohir.A05G133850' => 'ghi', 'Gohir.A05G161400' => 'ghi', 'Gohir.A06G012900' => 'ghi', 'Gohir.A06G035901' => 'ghi', 'Gohir.A06G127100' => 'ghi', 'Gohir.A06G210500' => 'ghi', 'Gohir.A08G008650' => 'ghi', 'Gohir.A09G072700' => 'ghi', 'Gohir.A09G088301' => 'ghi', 'Gohir.A10G040600' => 'ghi', 'Gohir.A12G036300' => 'ghi', 'Gohir.A12G143350' => 'ghi', 'Gohir.A12G165500' => 'ghi', 'Gohir.A13G145700' => 'ghi', 'Gohir.D01G050000' => 'ghi', 'Gohir.D01G051366' => 'ghi', 'Gohir.D01G161350' => 'ghi', 'Gohir.D02G065900' => 'ghi', 'Gohir.D05G164200' => 'ghi', 'Gohir.D05G355500' => 'ghi', 'Gohir.D06G010400' => 'ghi', 'Gohir.D06G111250' => 'ghi', 'Gohir.D06G132000' => 'ghi', 'Gohir.D06G210500' => 'ghi', 'Gohir.D07G165675' => 'ghi', 'Gohir.D08G062240' => 'ghi', 'Gohir.D08G086101' => 'ghi', 'Gohir.D08G138060' => 'ghi', 'Gohir.D09G072300' => 'ghi', 'Gohir.D10G041400' => 'ghi', 'Gohir.D11G191020' => 'ghi', 'Gohir.D11G212066' => 'ghi', 'Gohir.D12G036300' => 'ghi', 'Gohir.D12G168600' => 'ghi', 'Gohir.D13G150600' => 'ghi', 'Gorai.001G057300' => 'gra', 'Gorai.002G069900' => 'gra', 'Gorai.002G200000' => 'gra', 'Gorai.003G067600' => 'gra', 'Gorai.005G074800' => 'gra', 'Gorai.006G087300' => 'gra', 'Gorai.008G037500' => 'gra', 'Gorai.008G181400' => 'gra', 'Gorai.009G169400' => 'gra', 'Gorai.009G387900' => 'gra', 'Gorai.010G013300' => 'gra', 'Gorai.010G153800' => 'gra', 'Gorai.010G255800' => 'gra', 'Gorai.011G043700' => 'gra', 'Gorai.011G198900' => 'gra', 'Gorai.013G168400' => 'gra', 'GSVIVG01005212001' => 'vvi', 'GSVIVG01006163001' => 'vvi', 'GSVIVG01009625001' => 'vvi', 'GSVIVG01014338001' => 'vvi', 'GSVIVG01020005001' => 'vvi', 'GSVIVG01021450001' => 'vvi', 'GSVIVG01023975001' => 'vvi', 'GSVIVG01034490001' => 'vvi', 'HanXRQChr04g0112071' => 'han', 'HanXRQChr05g0131151' => 'han', 'HanXRQChr09g0262371' => 'han', 'HanXRQChr09g0268401' => 'han', 'HanXRQChr10g0279241' => 'han', 'HanXRQChr10g0297961' => 'han', 'HanXRQChr11g0326231' => 'han', 'HanXRQChr11g0328471' => 'han', 'HanXRQChr16g0507941' => 'han', 'HanXRQChr17g0560211' => 'han', 'Haze_02108' => 'cav', 'Haze_02428' => 'cav', 'Haze_05593' => 'cav', 'Haze_06448' => 'cav', 'Haze_09427' => 'cav', 'Haze_12022' => 'cav', 'Haze_17612' => 'cav', 'Haze_17928' => 'cav', 'Hma1.2p1_0032F.1_g019250' => 'hma', 'Hma1.2p1_0163F.1_g072690' => 'hma', 'Hma1.2p1_0265F.1_g106710' => 'hma', 'Hma1.2p1_0286F.1_g113970' => 'hma', 'Hma1.2p1_0363F.1_g136640' => 'hma', 'Hma1.2p1_0584F.1_g183470' => 'hma', 'Hma1.2p1_0885F.1_g232570' => 'hma', 'HPP92_006022' => 'vpl', 'HPP92_007320' => 'vpl', 'HPP92_011521' => 'vpl', 'HPP92_019387' => 'vpl', 'HPP92_024038' => 'vpl', 'Hund05891' => 'sun', 'Hund06450' => 'sun', 'Hund12053' => 'sun', 'Hund16800' => 'sun', 'Hund21222' => 'sun', 'Hund22896' => 'sun', 'Hund23746' => 'sun', 'Hund27083' => 'sun', 'Lalb_Chr02g0141831' => 'lal', 'Lalb_Chr02g0141841' => 'lal', 'Lalb_Chr05g0220411' => 'lal', 'Lalb_Chr06g0162081' => 'lal', 'Lalb_Chr09g0327651' => 'lal', 'Lalb_Chr13g0295051' => 'lal', 'Lalb_Chr15g0086801' => 'lal', 'Lalb_Chr16g0383781' => 'lal', 'Lalb_Chr16g0383791' => 'lal', 'Lalb_Chr18g0055441' => 'lal', 'Lalb_Chr18g0059611' => 'lal', 'Lalb_Chr20g0109661' => 'lal', 'Lalb_Chr20g0109831' => 'lal', 'Lalb_Chr20g0121871' => 'lal', 'Lalb_Chr22g0355361' => 'lal', 'Lalb_Chr25g0286371' => 'lal', 'Lj1A1187G43' => 'lonja', 'Lj1A1205T50' => 'lonja', 'Lj1A800G33' => 'lonja', 'Lj1C1187T7' => 'lonja', 'Lj1C843T11' => 'lonja', 'Lj1g0010940' => 'lja', 'Lj2A288T69' => 'lonja', 'Lj3g0024276' => 'lja', 'Lj4A47T76' => 'lonja', 'Lj4g0005805' => 'lja', 'Lj4g0006097' => 'lja', 'Lj4g0008528' => 'lja', 'Lj4g0024907' => 'lja', 'Lj5g0012472' => 'lja', 'Lj5g0018648' => 'lja', 'Lj6C789G1' => 'lonja', 'Lj6g0004000' => 'lja', 'Lj7A292G67' => 'lonja', 'Lj7A292T64' => 'lonja', 'Lj9A400T58' => 'lonja', 'Lsat_1_v5_gn_1_126181' => 'lsa', 'Lsat_1_v5_gn_4_123041' => 'lsa', 'Lsat_1_v5_gn_4_133620' => 'lsa', 'Lsat_1_v5_gn_4_53221' => 'lsa', 'Lsat_1_v5_gn_4_71961' => 'lsa', 'Lsat_1_v5_gn_7_105241' => 'lsa', 'Lsat_1_v5_gn_7_21361' => 'lsa', 'Lsat_1_v5_gn_7_28860' => 'lsa', 'Lsat_1_v5_gn_7_31260' => 'lsa', 'Lsat_1_v5_gn_8_52801' => 'lsa', 'Manes.02G191400' => 'mes', 'Manes.03G110100' => 'mes', 'Manes.04G071100' => 'mes', 'Manes.05G100500' => 'mes', 'Manes.05G164700' => 'mes', 'Manes.15G087000' => 'mes', 'Manes.15G121500' => 'mes', 'Manes.16G028300' => 'mes', 'Manes.17G046100' => 'mes', 'Manes.17G069800' => 'mes', 'Manes.18G100500' => 'mes', 'Mapoly0002s0109' => 'mpo', 'Mapoly0024s0007' => 'mpo', 'Mapoly0089s0032' => 'mpo', 'MBI04_g42241_MAGBIO' => 'mbi', 'MBI05_g11988_MAGBIO' => 'mbi', 'MBI05_g35452_MAGBIO' => 'mbi', 'MBI07_g30179_MAGBIO' => 'mbi', 'MBI07_g35859_MAGBIO' => 'mbi', 'MBI07_g35860_MAGBIO' => 'mbi', 'MBI07_g37166_MAGBIO' => 'mbi', 'MBI08_g18172_MAGBIO' => 'mbi', 'MBI09_g08441_MAGBIO' => 'mbi', 'MBI13_g01676_MAGBIO' => 'mbi', 'MBI14_g42955_MAGBIO' => 'mbi', 'MBI16_g13161_MAGBIO' => 'mbi', 'MBI17_g27204_MAGBIO' => 'mbi', 'MBI19_g21595_MAGBIO' => 'mbi', 'MD00G1148400' => 'mdo', 'MD02G1301200' => 'mdo', 'MD03G1227800' => 'mdo', 'MD05G1041100' => 'mdo', 'MD05G1124800' => 'mdo', 'MD05G1284000' => 'mdo', 'MD05G1338800' => 'mdo', 'MD05G1338900' => 'mdo', 'MD07G1022800' => 'mdo', 'MD10G1047500' => 'mdo', 'MD10G1127500' => 'mdo', 'MD10G1262300' => 'mdo', 'MD10G1293800' => 'mdo', 'MD16G1074300' => 'mdo', 'Medtr1g021670' => 'mtr', 'Medtr1g096320' => 'mtr', 'Medtr2g013690' => 'mtr', 'Medtr2g019450' => 'mtr', 'Medtr2g085170' => 'mtr', 'Medtr4g088785' => 'mtr', 'Medtr8g055930' => 'mtr', 'Medtr8g085850' => 'mtr', 'MELO3C002605.2' => 'cme', 'MELO3C003891.2' => 'cme', 'MELO3C004012.2' => 'cme', 'MELO3C007134.2' => 'cme', 'MELO3C008118.2' => 'cme', 'MELO3C016700.2' => 'cme', 'MELO3C024127.2' => 'cme', 'MELO3C033361.2' => 'cme', 'MELO3C033362.2' => 'cme', 'Migut.C00430' => 'egut', 'Migut.C01246' => 'egut', 'Migut.E00101' => 'egut', 'Migut.H01486' => 'egut', 'Migut.H01939' => 'egut', 'Migut.K00360' => 'egut', 'Migut.M00910' => 'egut', 'Migut.M01139' => 'egut', 'Migut.N02677' => 'egut', 'MSTRG.13252' => 'ama', 'MSTRG.14701' => 'ama', 'MSTRG.1521' => 'ama', 'MSTRG.15884' => 'ama', 'MSTRG.16242' => 'ama', 'MSTRG.22285' => 'ama', 'MSTRG.22444' => 'ama', 'MSTRG.2349' => 'ama', 'MSTRG.26308' => 'ama', 'MSTRG.28296' => 'ama', 'MSTRG.9895' => 'ama', 'Nitab4.5_0000110g0060' => 'nta', 'Nitab4.5_0000420g0130' => 'nta', 'Nitab4.5_0000422g0030' => 'nta', 'Nitab4.5_0000560g0180' => 'nta', 'Nitab4.5_0000703g0100' => 'nta', 'Nitab4.5_0000786g0200' => 'nta', 'Nitab4.5_0001336g0020' => 'nta', 'Nitab4.5_0001796g0030' => 'nta', 'Nitab4.5_0003348g0060' => 'nta', 'Nitab4.5_0003698g0040' => 'nta', 'Nitab4.5_0003942g0090' => 'nta', 'Nitab4.5_0004775g0070' => 'nta', 'Nitab4.5_0004864g0030' => 'nta', 'Nitab4.5_0005615g0020' => 'nta', 'Nitab4.5_0009288g0030' => 'nta', 'Nitab4.5_0009341g0010' => 'nta', 'Nitab4.5_0009535g0010' => 'nta', 'Nn1g03995' => 'nnu', 'Nn1g04100' => 'nnu', 'Nn1g06530' => 'nnu', 'Nn3g16404' => 'nnu', 'Nn3g17212' => 'nnu', 'Nn3g20776' => 'nnu', 'Nn3g21923' => 'nnu', 'Nn5g27737' => 'nnu', 'Nn5g29461' => 'nnu', 'Nn7g38355' => 'nnu', 'Nn8g39873' => 'nnu', 'Oeu000548.2' => 'oeu', 'Oeu004672.1' => 'oeu', 'Oeu015605.2' => 'oeu', 'Oeu016092.1' => 'oeu', 'Oeu017879.3' => 'oeu', 'Oeu024910.1' => 'oeu', 'Oeu028965.1' => 'oeu', 'Oeu031269.1' => 'oeu', 'Oeu031270.1' => 'oeu', 'Oeu032535.1' => 'oeu', 'Oeu034151.1' => 'oeu', 'Oeu034152.1' => 'oeu', 'Oeu034588.2' => 'oeu', 'Oeu050846.1' => 'oeu', 'Oeu050849.2' => 'oeu', 'Oeu051063.2' => 'oeu', 'Oeu052368.1' => 'oeu', 'Oeu052370.1' => 'oeu', 'Os01g0210400' => 'osa', 'Os01g0304300' => 'osa', 'Os01g0749100' => 'osa', 'Os02g0745800' => 'osa', 'Os03g0769050' => 'osa', 'Os05g0531500' => 'osa', 'Os06g0724300' => 'osa', 'Os11g0198100' => 'osa', 'Peaxi162Scf00069g01425' => 'pax', 'Peaxi162Scf00280g00811' => 'pax', 'Peaxi162Scf00310g00615' => 'pax', 'Peaxi162Scf00362g00542' => 'pax', 'Peaxi162Scf00461g00310' => 'pax', 'Peaxi162Scf00530g00118' => 'pax', 'Peaxi162Scf00541g00057' => 'pax', 'Peaxi162Scf00661g00017' => 'pax', 'Peaxi162Scf00926g00027' => 'pax', 'Peaxi162Scf01064g00263' => 'pax', 'Peaxi162Scf01211g00135' => 'pax', 'PGR004G2336' => 'pgr', 'PGR042G0327' => 'pgr', 'PGR042G1957' => 'pgr', 'PGR042G2003' => 'pgr', 'PGR042G3929' => 'pgr', 'PGR083G1137' => 'pgr', 'PGR083G1364' => 'pgr', 'PGSC0003DMG400003381' => 'stu', 'PGSC0003DMG400003417' => 'stu', 'PGSC0003DMG400008981' => 'stu', 'PGSC0003DMG400012417' => 'stu', 'PGSC0003DMG400012823' => 'stu', 'PGSC0003DMG400016885' => 'stu', 'PGSC0003DMG400022812' => 'stu', 'PGSC0003DMG400029726' => 'stu', 'PGSC0003DMG401009243' => 'stu', 'PGSC0003DMG401031505' => 'stu', 'PGSC0003DMG402031505' => 'stu', 'Phvul.001G017600' => 'pvu', 'Phvul.002G193500' => 'pvu', 'Phvul.002G228900' => 'pvu', 'Phvul.002G236800' => 'pvu', 'Phvul.003G049500' => 'pvu', 'Phvul.005G072000' => 'pvu', 'Phvul.006G164800' => 'pvu', 'Phvul.006G185100' => 'pvu', 'Phvul.007G090000' => 'pvu', 'Potri.001G399800' => 'ptr', 'Potri.002G149900' => 'ptr', 'Potri.004G044100' => 'ptr', 'Potri.004G177600' => 'ptr', 'Potri.009G138000' => 'ptr', 'Potri.010G094000' => 'ptr', 'Potri.011G053000' => 'ptr', 'Potri.011G119300' => 'ptr', 'Potri.013G113700' => 'ptr', 'Potri.018G107800' => 'ptr', 'Potri.019G084100' => 'ptr', 'Pp3c14_23720' => 'ppa', 'Pp3c16_6340' => 'ppa', 'Pp3c23_13420' => 'ppa', 'Pp3c24_2740' => 'ppa', 'Pp3c25_860' => 'ppa', 'Pp3c8_21750' => 'ppa', 'Prupe.1G273000' => 'ppe', 'Prupe.1G273700' => 'ppe', 'Prupe.1G274100' => 'ppe', 'Prupe.2G023300' => 'ppe', 'Prupe.4G048000' => 'ppe', 'Prupe.4G080400' => 'ppe', 'Prupe.4G181200' => 'ppe', 'Prupe.8G056900' => 'ppe', 'Prupe.8G168700' => 'ppe', 'Psat1g189080' => 'psa', 'Psat1g204760' => 'psa', 'Psat4g175560' => 'psa', 'Psat4g177720' => 'psa', 'Psat5g244240' => 'psa', 'Psat6g010720' => 'psa', 'Psat6g187200' => 'psa', 'Psat7g072040' => 'psa', 'PSO017G3501' => 'pso', 'PSO063G2148' => 'pso', 'PSO063G5608' => 'pso', 'PSO210G6392' => 'pso', 'PSO541G2319' => 'pso', 'PSO541G2836' => 'pso', 'PSO541G4012' => 'pso', 'PSO541G6253' => 'pso', 'PSO675G0580' => 'pso', 'PSO675G0856' => 'pso', 'PSO675G5635' => 'pso', 'PSO675G9157' => 'pso', 'PSO832G1660' => 'pso', 'PSO832G1969' => 'pso', 'QL02p007186' => 'qlo', 'QL02p033904' => 'qlo', 'QL03p064391' => 'qlo', 'QL05p040593' => 'qlo', 'QL05p058242' => 'qlo', 'QL08p021825' => 'qlo', 'QL11p004981' => 'qlo', 'RcHm_v2.0_Chr1g0318301' => 'rch', 'RcHm_v2.0_Chr4g0418501' => 'rch', 'RcHm_v2.0_Chr4g0439971' => 'rch', 'RcHm_v2.0_Chr5g0008541' => 'rch', 'RcHm_v2.0_Chr5g0014101' => 'rch', 'RcHm_v2.0_Chr5g0014131' => 'rch', 'RcHm_v2.0_Chr5g0033621' => 'rch', 'RcHm_v2.0_Chr6g0272041' => 'rch', 'RcHm_v2.0_Chr6g0278831' => 'rch', 'Rhsim02G0130400' => 'rsi', 'Rhsim02G0171100' => 'rsi', 'Rhsim05G0053000' => 'rsi', 'Rhsim05G0053100' => 'rsi', 'Rhsim06G0096500' => 'rsi', 'Rhsim06G0096600' => 'rsi', 'Rhsim06G0199100' => 'rsi', 'Rhsim12G0062300' => 'rsi', 'Rhsim12G0062800' => 'rsi', 'Sabra02G0118600' => 'sbr', 'Sabra04G0027300' => 'sbr', 'Sabra04G0119500' => 'sbr', 'Sabra08G0112500' => 'sbr', 'Sabra11G0036800' => 'sbr', 'Sabra11G0103800' => 'sbr', 'Sabra13G0096300' => 'sbr', 'Sabra16G0262300' => 'sbr', 'Sabra18G0091700' => 'sbr', 'Sabra19G0095400' => 'sbr', 'SalBow6G3080' => 'sbo', 'SalBow7G1157' => 'sbo', 'SalBow7G2123' => 'sbo', 'SalBow7G2285' => 'sbo', 'SalBow7G3537' => 'sbo', 'SalBow8G2947' => 'sbo', 'SalBow8G4463' => 'sbo', 'SalBow8G5466' => 'sbo', 'Sc01g0001750' => 'sci', 'Sc02g0006640' => 'sci', 'Sc02g0006670' => 'sci', 'Sc04g0008220' => 'sci', 'Sc05g0006190' => 'sci', 'Sc08g0002760' => 'sci', 'Sc17g0006170' => 'sci', 'Sc22g0002050' => 'sci', 'Sc23g0001190' => 'sci', 'Sc24g0000980' => 'sci', 'Sed0006245' => 'sed', 'Sed0007543' => 'sed', 'Sed0009411' => 'sed', 'Sed0010765' => 'sed', 'Sed0012944' => 'sed', 'Sed0014682' => 'sed', 'Sed0016174' => 'sed', 'Sed0016796' => 'sed', 'Sed0020317' => 'sed', 'Sed0021467' => 'sed', 'SEGI_01316' => 'sgi', 'SEGI_03374' => 'sgi', 'SEGI_16265' => 'sgi', 'SEGI_18569' => 'sgi', 'SEGI_20351' => 'sgi', 'SEGI_26395' => 'sgi', 'SEGI_29469' => 'sgi', 'SEGI_34771' => 'sgi', 'SEGI_36769' => 'sgi', 'SEGI_37139' => 'sgi', 'SGA_v2.0_scaffold100G29687' => 'sas', 'SGA_v2.0_scaffold118G32472' => 'sas', 'SGA_v2.0_scaffold14G07051' => 'sas', 'SGA_v2.0_scaffold183G39845' => 'sas', 'SGA_v2.0_scaffold1G00174' => 'sas', 'SGA_v2.0_scaffold22G09714' => 'sas', 'SGA_v2.0_scaffold333G48992' => 'sas', 'SGA_v2.0_scaffold46G17491' => 'sas', 'SGA_v2.0_scaffold49G18294' => 'sas', 'SGA_v2.0_scaffold63G21658' => 'sas', 'SHI01741' => 'shi', 'SHI05771' => 'shi', 'SHI18077' => 'shi', 'SHI20525' => 'shi', 'SHI20527' => 'shi', 'SHI20528' => 'shi', 'SMO172G0185' => 'smo', 'SMO198G0020' => 'smo', 'SMO351G0006' => 'smo', 'SMO356G0118' => 'smo', 'SMO358G0296' => 'smo', 'SMO367G0079' => 'smo', 'SMO367G1277' => 'smo', 'Solyc01g014220.3' => 'sly', 'Solyc01g111770.2' => 'sly', 'Solyc02g078180.3' => 'sly', 'Solyc03g006430.3' => 'sly', 'Solyc03g006456.1' => 'sly', 'Solyc03g079860.2' => 'sly', 'Solyc04g079770.3' => 'sly', 'Solyc05g007430.4' => 'sly', 'Solyc07g063150.3' => 'sly', 'Solyc08g016620.3' => 'sly', 'Solyc09g057590.3' => 'sly', 'Solyc09g057600.1' => 'sly', 'Solyc10g009050.3' => 'sly', 'Solyc11g017420.2' => 'sly', 'Sopen01g053810' => 'spe', 'Sopen02g023040' => 'spe', 'Sopen03g002440' => 'spe', 'Sopen04g033350' => 'spe', 'Sopen05g003310' => 'spe', 'Sopen07g004050' => 'spe', 'Sopen07g031340' => 'spe', 'Sopen08g006990' => 'spe', 'Sopen10g004830' => 'spe', 'Sopen11g009370' => 'spe', 'Sp1g24450' => 'spa', 'Sp1g29670' => 'spa', 'Sp1g39600' => 'spa', 'Sp2g11080' => 'spa', 'Sp2g13970' => 'spa', 'Sp4g16130' => 'spa', 'Sp6g13080' => 'spa', 'Sp7g37270' => 'spa', 'TAR371G0065' => 'tar', 'TAR376G0340' => 'tar', 'TAR376G0435' => 'tar', 'TAR381G0002' => 'tar', 'TAR381G1236' => 'tar', 'TAR624G0055' => 'tar', 'TAR624G0324' => 'tar', 'TAR624G0696' => 'tar', 'TAR624G0906' => 'tar', 'TAR625G0107' => 'tar', 'TAR626G0015' => 'tar', 'TAR626G1356' => 'tar', 'TAR627G0888' => 'tar', 'TAR628G0399' => 'tar', 'TAR628G1327' => 'tar', 'TAR629G2831' => 'tar', 'TAR629G2874' => 'tar', 'TAR633G1432' => 'tar', 'TAR633G2771' => 'tar', 'THA.LOC104803394' => 'tha', 'THA.LOC104805153' => 'tha', 'THA.LOC104806784' => 'tha', 'THA.LOC104810473' => 'tha', 'THA.LOC104813100' => 'tha', 'THA.LOC104814215' => 'tha', 'THA.LOC104815554' => 'tha', 'THA.LOC104820544' => 'tha', 'THA.LOC104824754' => 'tha', 'THA.LOC104827717' => 'tha', 'Thecc.02G031400' => 'tca', 'Thecc.02G055900' => 'tca', 'Thecc.02G350800' => 'tca', 'Thecc.06G150900' => 'tca', 'Thecc.06G186600' => 'tca', 'Thecc.07G089600' => 'tca', 'Thecc.08G020400' => 'tca', 'Thecc.08G182100' => 'tca', 'Thhalv10000873m.g' => 'esa', 'Thhalv10004185m.g' => 'esa', 'Thhalv10006981m.g' => 'esa', 'Thhalv10007204m.g' => 'esa', 'Thhalv10011374m.g' => 'esa', 'Thhalv10013482m.g' => 'esa', 'Thhalv10017801m.g' => 'esa', 'Thhalv10024983m.g' => 'esa', 'TPR.G12072' => 'tpr', 'TPR.G15769' => 'tpr', 'TPR.G16504' => 'tpr', 'TPR.G16506' => 'tpr', 'TPR.G24345' => 'tpr', 'TPR.G26666' => 'tpr', 'TPR.G27320' => 'tpr', 'TPR.G31819' => 'tpr', 'TPR.G38879' => 'tpr', 'TPR.G39015' => 'tpr', 'TPR.G8819' => 'tpr', 'TWI09G0924' => 'twi', 'TWI12G0811' => 'twi', 'TWI12G1294' => 'twi', 'TWI31G0150' => 'twi', 'TWI36G1262' => 'twi', 'TWI38G1287' => 'twi', 'TWI38G1633' => 'twi', 'TWI38G1982' => 'twi', 'TWI39G0116' => 'twi', 'TWI60G1011' => 'twi', 'TWI63G0171' => 'twi', 'TWI73G0839' => 'twi', 'TWI79G1511' => 'twi', 'unitig_0.g915' => 'ugi', 'unitig_0.g916' => 'ugi', 'unitig_21.g20219' => 'ugi', 'unitig_21.g20416' => 'ugi', 'unitig_578.g16132' => 'ugi', 'unitig_578.g16718' => 'ugi', 'unitig_62.g23481' => 'ugi', 'unitig_744.g24535' => 'ugi', 'unitig_749.g13525' => 'ugi', 'vmacro01248' => 'vma', 'vmacro02290' => 'vma', 'vmacro10946' => 'vma', 'vmacro11865' => 'vma', 'vmacro12493' => 'vma', 'vmacro17322' => 'vma', 'vmacro21599' => 'vma', 'vmacro23041' => 'vma', 'VMungo0251G0004' => 'vmu', 'VMungo0251G2639' => 'vmu', 'VMungo0251G2967' => 'vmu', 'VMungo0540G0864' => 'vmu', 'VMungo0540G1569' => 'vmu', 'VMungo0647G0317' => 'vmu', 'VMungo0720G1373' => 'vmu', 'VMungo0720G1508' => 'vmu', 'VMungo1080G0485' => 'vmu', 'VMungo1215G3177' => 'vmu', 'Zm00001eb112600' => 'zma', 'Zm00001eb120220' => 'zma', 'Zm00001eb153240' => 'zma', 'Zm00001eb168880' => 'zma', 'Zm00001eb213920' => 'zma', 'Zm00001eb228280' => 'zma', 'Zm00001eb254580' => 'zma', 'Zm00001eb272180' => 'zma', 'Zm00001eb293190' => 'zma', 'Zm00001eb322930' => 'zma', 'Zm00001eb353360' => 'zma', 'Zm00001eb353390' => 'zma', 'Zm00001eb353430' => 'zma', 'Zm00001eb353440' => 'zma', 'Zm00001eb353780' => 'zma' ) $gf_id = 'HOM05D000499' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000499' ) $data_identifier = 'HOM05D000499' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 29, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 12, 'amhyb' => (int) 8, 'aly' => (int) 12, 'aox' => (int) 9, 'arhy' => (int) 26, 'ath' => (int) 8, 'atr' => (int) 7, 'acertr' => (int) 10, 'cqu' => (int) 15, 'bca' => (int) 29, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 11, 'cansat' => (int) 8, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 9, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 8, 'cpa' => (int) 10, 'csa' => (int) 7, 'camsi' => (int) 20, 'dca' => (int) 8, 'din' => (int) 12, 'dzi' => (int) 14, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 6, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 38, 'gra' => (int) 16, 'vvi' => (int) 8, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 5, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 11, 'lja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 11, 'mpo' => (int) 3, 'mbi' => (int) 14, 'mdo' => (int) 14, 'mtr' => (int) 8, 'cme' => (int) 9, 'egut' => (int) 9, 'ama' => (int) 11, 'nta' => (int) 17, 'nnu' => (int) 11, 'oeu' => (int) 18, 'osa' => (int) 8, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 6, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 9, 'rsi' => (int) 9, 'sbr' => (int) 10, 'sbo' => (int) 8, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 10, 'sas' => (int) 10, 'shi' => (int) 6, 'smo' => (int) 7, 'sly' => (int) 14, 'spe' => (int) 10, 'spa' => (int) 8, 'tar' => (int) 19, 'tha' => (int) 10, 'tca' => (int) 8, 'esa' => (int) 8, 'tpr' => (int) 11, 'twi' => (int) 13, 'ugi' => (int) 9, 'vma' => (int) 8, 'vmu' => (int) 10, 'zma' => (int) 15 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb353780' $species_info = array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ) $local_species = 'amhyb' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000499', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1066', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p29780' => 'bna', 'A02p33180' => 'bna', 'A03p16470' => 'bna', 'A03p66010' => 'bna', 'A04p25970' => 'bna', 'A06p01270' => 'bna', 'A06p46080' => 'bna', 'A07p11400' => 'bna', 'A08p01840' => 'bna', 'A08p08230' => 'bna', 'A08p25740' => 'bna', 'A09p32070' => 'bna', 'A09p37830' => 'bna', 'A09p42840' => 'bna', 'A09p42850' => 'bna', 'Aa31LG10G2060' => 'aar', 'Aa31LG2G7410' => 'aar', 'Aa31LG6G10200' => 'aar', 'Aa31LG6G16680' => 'aar', 'Aa31LG6G8470' => 'aar', 'Aa31LG9G12730' => 'aar', 'Aa31LG9G13680' => 'aar', 'Aa31LG9G14920' => 'aar', 'Aa31LG9G6650' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4977' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5467' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3254' => 'aag', 'Actinidia02578' => 'ach', 'Actinidia07693' => 'ach', 'Actinidia08413' => 'ach', 'Actinidia08414' => 'ach', 'Actinidia15289' => 'ach', 'Actinidia19871' => 'ach', 'Actinidia21475' => 'ach', 'Actinidia22576' => 'ach', 'Actinidia28327' => 'ach', 'Actinidia32491' => 'ach', 'Actinidia39463' => 'ach', 'Actinidia39571' => 'ach', 'Ah.01g013750' => 'amhyb', 'Ah.01g023210' => 'amhyb', 'Ah.04g164850' => 'amhyb', 'Ah.05g178060' => 'amhyb', 'Ah.07g204270' => 'amhyb', 'Ah.07g208480' => 'amhyb', 'Ah.09g237410' => 'amhyb', 'Ah.14g089460' => 'amhyb', 'AL1G41790' => 'aly', 'AL1G49050' => 'aly', 'AL1G53810' => 'aly', 'AL1G61400' => 'aly', 'AL4G18580' => 'aly', 'AL5G12510' => 'aly', 'AL5G12540' => 'aly', 'AL6G43230' => 'aly', 'AL7G10370' => 'aly', 'AL7G19250' => 'aly', 'AL8G12240' => 'aly', 'AL8G18540' => 'aly', 'Aqoxy1G02409' => 'aox', 'Aqoxy2G03993' => 'aox', 'Aqoxy3G03357' => 'aox', 'Aqoxy4G00785' => 'aox', 'Aqoxy5G02598' => 'aox', 'Aqoxy6G00132' => 'aox', 'Aqoxy7G01776' => 'aox', 'Aqoxy7G02316' => 'aox', 'Aqoxy7G03973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.12AFKW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B8730' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27IQR1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3F75VG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3RE0GA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41TCQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.527VTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FIR39' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5W8UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DA38EV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ63HS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H1I32C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HC27T5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4M8AP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7N3CZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9UVDZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LS1NQA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT1D4B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SKC4TM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCFV76' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF9Q1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQWD9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1ZM88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WE07RT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YCK7VH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJE6Q6' => 'arhy', 'AT1G28240' => 'ath', 'AT1G34550' => 'ath', 'AT1G53040' => 'ath', 'AT2G02910' => 'ath', 'AT4G09630' => 'ath', 'AT4G38500' => 'ath', 'AT5G42660' => 'ath', 'AT5G46220' => 'ath', 'ATR0152G026' => 'atr', 'ATR0564G343' => 'atr', 'ATR0706G151' => 'atr', 'ATR0733G207' => 'atr', 'ATR0751G234' => 'atr', 'ATR0807G048' => 'atr', 'ATR1091G084' => 'atr', 'Atru.chr10.1229' => 'acertr', 'Atru.chr10.1230' => 'acertr', 'Atru.chr10.1874' => 'acertr', 'Atru.chr11.1808' => 'acertr', 'Atru.chr13.1795' => 'acertr', 'Atru.chr13.570' => 'acertr', 'Atru.chr2.2608' => 'acertr', 'Atru.chr2.2609' => 'acertr', 'Atru.chr5.3428' => 'acertr', 'Atru.chr8.1171' => 'acertr', 'AUR62004651' => 'cqu', 'AUR62008675' => 'cqu', 'AUR62010014' => 'cqu', 'AUR62013004' => 'cqu', 'AUR62014825' => 'cqu', 'AUR62015015' => 'cqu', 'AUR62015151' => 'cqu', 'AUR62017020' => 'cqu', 'AUR62019422' => 'cqu', 'AUR62023570' => 'cqu', 'AUR62025571' => 'cqu', 'AUR62029098' => 'cqu', 'AUR62033863' => 'cqu', 'AUR62034296' => 'cqu', 'AUR62040075' => 'cqu', 'BcaB02g07334' => 'bca', 'BcaB02g10575' => 'bca', 'BcaB03g12119' => 'bca', 'BcaB03g12120' => 'bca', 'BcaB03g13945' => 'bca', 'BcaB04g17123' => 'bca', 'BcaB04g17867' => 'bca', 'BcaB04g19839' => 'bca', 'BcaB07g30317' => 'bca', 'BcaB07g32432' => 'bca', 'BcaB07g33362' => 'bca', 'BcaB08g36611' => 'bca', 'BcaC01g00028' => 'bca', 'BcaC01g01356' => 'bca', 'BcaC01g02034' => 'bca', 'BcaC01g06051' => 'bca', 'BcaC03g16839' => 'bca', 'BcaC03g17176' => 'bca', 'BcaC05g26829' => 'bca', 'BcaC06g31490' => 'bca', 'BcaC06g35344' => 'bca', 'BcaC06g36570' => 'bca', 'BcaC07g37537' => 'bca', 'BcaC08g43491' => 'bca', 'BcaC08g43773' => 'bca', 'BcaNung00234' => 'bca', 'BcaNung01982' => 'bca', 'BcaNung03707' => 'bca', 'BcaNung06454' => 'bca', 'BolC2t10762H' => 'bol', 'BolC2t11191H' => 'bol', 'BolC3t14322H' => 'bol', 'BolC3t19747H' => 'bol', 'BolC3t21425H' => 'bol', 'BolC4t27800H' => 'bol', 'BolC5t31423H' => 'bol', 'BolC6t35951H' => 'bol', 'BolC6t36282H' => 'bol', 'BolC7t40678H' => 'bol', 'BolC7t40679H' => 'bol', 'BolC7t42222H' => 'bol', 'BolC7t43492H' => 'bol', 'BolC7t46785H' => 'bol', 'BolC8t47853H' => 'bol', 'BolC9t56805H' => 'bol', 'BraA02t08000Z' => 'bra', 'BraA02t08341Z' => 'bra', 'BraA03t10936Z' => 'bra', 'BraA03t15657Z' => 'bra', 'BraA04t18100Z' => 'bra', 'BraA05t20523Z' => 'bra', 'BraA06t23353Z' => 'bra', 'BraA06t27473Z' => 'bra', 'BraA06t27769Z' => 'bra', 'BraA07t28928Z' => 'bra', 'BraA08t32236Z' => 'bra', 'BraA08t32841Z' => 'bra', 'BraA08t34524Z' => 'bra', 'BraA09t38742Z' => 'bra', 'BraA09t39295Z' => 'bra', 'C02p47180' => 'bna', 'C02p50990' => 'bna', 'C03p19360' => 'bna', 'C03p74950' => 'bna', 'C03p91000' => 'bna', 'C04p63260' => 'bna', 'C05p27050' => 'bna', 'C06p08750' => 'bna', 'C06p11490' => 'bna', 'C07p02820' => 'bna', 'C07p17180' => 'bna', 'C07p29440' => 'bna', 'C07p63730' => 'bna', 'C09p39260' => 'bna', 'CAN.G1164.34' => 'can', 'CAN.G1164.39' => 'can', 'CAN.G1530.3' => 'can', 'CAN.G162.61' => 'can', 'CAN.G176.6' => 'can', 'CAN.G289.49' => 'can', 'CAN.G370.21' => 'can', 'CAN.G370.22' => 'can', 'CAN.G371.117' => 'can', 'CAN.G58.37' => 'can', 'CAN.G588.98' => 'can', 'CANSAT21G2266' => 'cansat', 'CANSAT25G2799' => 'cansat', 'CANSAT35G0862' => 'cansat', 'CANSAT35G1704' => 'cansat', 'CANSAT35G1760' => 'cansat', 'CANSAT56G3971' => 'cansat', 'CANSAT56G4116' => 'cansat', 'CANSAT80G1259' => 'cansat', 'CARHR027730' => 'chi', 'CARHR033880' => 'chi', 'CARHR043270' => 'chi', 'CARHR145330' => 'chi', 'CARHR145340' => 'chi', 'CARHR175570' => 'chi', 'CARHR181570' => 'chi', 'CARHR258470' => 'chi', 'CARHR260490' => 'chi', 'CARHR294220' => 'chi', 'Carub.0001s2668' => 'cru', 'Carub.0001s3257' => 'cru', 'Carub.0001s4220' => 'cru', 'Carub.0005s0179' => 'cru', 'Carub.0006s2807' => 'cru', 'Carub.0007s0039' => 'cru', 'Carub.0008s0169' => 'cru', 'Carub.0008s0636' => 'cru', 'Ca_00338_v3' => 'car', 'Ca_00542_v3' => 'car', 'Ca_01844_v3' => 'car', 'Ca_10611_v3' => 'car', 'Ca_13326_v3' => 'car', 'Ca_17944_v3' => 'car', 'Ca_18546_v3' => 'car', 'Ca_24219_v3' => 'car', 'Ca_29972_v3' => 'car', 'CBR_g3681' => 'cbr', 'CBR_g40021' => 'cbr', 'Cc01_g08140' => 'ccan', 'Cc02_g13410' => 'ccan', 'Cc02_g37480' => 'ccan', 'Cc05_g12030' => 'ccan', 'Cc09_g03370' => 'ccan', 'Cc09_g10300' => 'ccan', 'Cc10_g03530' => 'ccan', 'Cc10_g11380' => 'ccan', 'CDE01G0176' => 'cde', 'CDE02G0675' => 'cde', 'CDE02G0942' => 'cde', 'CDE02G1153' => 'cde', 'CDE02G4177' => 'cde', 'CDE04G2117' => 'cde', 'CDE04G2736' => 'cde', 'CDE08G1161' => 'cde', 'CDE09G1238' => 'cde', 'Cfa000467' => 'cfa', 'Cfa000947' => 'cfa', 'Cfa004969' => 'cfa', 'Cfa005284' => 'cfa', 'Cfa008993' => 'cfa', 'Cfa018187' => 'cfa', 'Cfa018454' => 'cfa', 'Cfa020585' => 'cfa', 'Ciclev10000424m.g' => 'ccl', 'Ciclev10003605m.g' => 'ccl', 'Ciclev10007828m.g' => 'ccl', 'Ciclev10014620m.g' => 'ccl', 'Ciclev10015169m.g' => 'ccl', 'Ciclev10018291m.g' => 'ccl', 'Ciclev10028256m.g' => 'ccl', 'Ciclev10033822m.g' => 'ccl', 'CiPaw.05G060300' => 'cil', 'CiPaw.05G085000' => 'cil', 'CiPaw.06G083700' => 'cil', 'CiPaw.06G120300' => 'cil', 'CiPaw.09G060500' => 'cil', 'CiPaw.09G123800' => 'cil', 'CiPaw.11G169700' => 'cil', 'CiPaw.12G118300' => 'cil', 'CiPaw.15G071000' => 'cil', 'CiPaw.15G081900' => 'cil', 'ClCG01G024610' => 'cla', 'ClCG03G006070' => 'cla', 'ClCG05G019250' => 'cla', 'ClCG09G009500' => 'cla', 'ClCG11G008200' => 'cla', 'ClCG11G018080' => 'cla', 'COL.COLO4_17373' => 'col', 'COL.COLO4_22994' => 'col', 'COL.COLO4_26389' => 'col', 'COL.COLO4_27170' => 'col', 'COL.COLO4_31074' => 'col', 'COL.COLO4_31465' => 'col', 'COL.COLO4_36438' => 'col', 'COL.COLO4_36439' => 'col', 'Cpa.g.c38781' => 'cpa', 'Cpa.g.sc128.12' => 'cpa', 'Cpa.g.sc166.7' => 'cpa', 'Cpa.g.sc166.8' => 'cpa', 'Cpa.g.sc20.111' => 'cpa', 'Cpa.g.sc27.31' => 'cpa', 'Cpa.g.sc64.36' => 'cpa', 'Cpa.g.sc64.37' => 'cpa', 'Cpa.g.sc66.49' => 'cpa', 'Cpa.g.sc80.64' => 'cpa', 'CsaV3_1G012320' => 'csa', 'CsaV3_2G008480' => 'csa', 'CsaV3_2G033450' => 'csa', 'CsaV3_3G044830' => 'csa', 'CsaV3_4G033710' => 'csa', 'CsaV3_6G051730' => 'csa', 'CsaV3_7G025350' => 'csa', 'CSS0001067' => 'camsi', 'CSS0005996' => 'camsi', 'CSS0006590' => 'camsi', 'CSS0009673' => 'camsi', 'CSS0010201' => 'camsi', 'CSS0010549' => 'camsi', 'CSS0011364' => 'camsi', 'CSS0014473' => 'camsi', 'CSS0014961' => 'camsi', 'CSS0020191' => 'camsi', 'CSS0021165' => 'camsi', 'CSS0022306' => 'camsi', 'CSS0030591' => 'camsi', 'CSS0030696' => 'camsi', 'CSS0032653' => 'camsi', 'CSS0037487' => 'camsi', 'CSS0041102' => 'camsi', 'CSS0041261' => 'camsi', 'CSS0046246' => 'camsi', 'CSS0049256' => 'camsi', 'DCAR_004075' => 'dca', 'DCAR_011538' => 'dca', 'DCAR_019553' => 'dca', 'DCAR_020952' => 'dca', 'DCAR_021739' => 'dca', 'DCAR_027407' => 'dca', 'DCAR_027913' => 'dca', 'DCAR_028066' => 'dca', 'Dinv05899' => 'din', 'Dinv07563' => 'din', 'Dinv08010' => 'din', 'Dinv14125' => 'din', 'Dinv20172' => 'din', 'Dinv30743' => 'din', 'Dinv31229' => 'din', 'Dinv34162' => 'din', 'Dinv36028' => 'din', 'Dinv39368' => 'din', 'Dinv40565' => 'din', 'Dinv41706' => 'din', 'Duzib052G0089' => 'dzi', 'Duzib116G0641' => 'dzi', 'Duzib132G0069' => 'dzi', 'Duzib132G1219' => 'dzi', 'Duzib147G0278' => 'dzi', 'Duzib160G0480' => 'dzi', 'Duzib170G0661' => 'dzi', 'Duzib177G0591' => 'dzi', 'Duzib187G1353' => 'dzi', 'Duzib192G0858' => 'dzi', 'Duzib192G0883' => 'dzi', 'Duzib213G0506' => 'dzi', 'Duzib235G0289' => 'dzi', 'Duzib251G0422' => 'dzi', 'ECA232G3898' => 'eca', 'ECA233G5950' => 'eca', 'ECA234G1699' => 'eca', 'ECA234G2421' => 'eca', 'ECA236G0426' => 'eca', 'ECA236G4331' => 'eca', 'ECA248G2573' => 'eca', 'EL10Ac1g00077' => 'bvu', 'EL10Ac1g01746' => 'bvu', 'EL10Ac2g03464' => 'bvu', 'EL10Ac4g08176' => 'bvu', 'EL10Ac7g17521' => 'bvu', 'EL10Ac8g20386' => 'bvu', 'EL10Ac9g21343' => 'bvu', 'EL10Ac9g22688' => 'bvu', 'Eucgr.B03434' => 'egr', 'Eucgr.D00618' => 'egr', 'Eucgr.E02395' => 'egr', 'Eucgr.F01129' => 'egr', 'Eucgr.F02622' => 'egr', 'Eucgr.F04207' => 'egr', 'FAN01G0570' => 'fan', 'FAN03G3351' => 'fan', 'FAN06G3702' => 'fan', 'FAN07G2149' => 'fan', 'FAN10G3758' => 'fan', 'FAN11G1170' => 'fan', 'FAN11G2050' => 'fan', 'FAN11G2724' => 'fan', 'FAN12G1700' => 'fan', 'FAN12G2028' => 'fan', 'FAN15G1160' => 'fan', 'FAN15G3063' => 'fan', 'FAN16G2540' => 'fan', 'FAN16G3077' => 'fan', 'FAN16G3624' => 'fan', 'FAN17G0221' => 'fan', 'FAN20G2492' => 'fan', 'FAN20G2905' => 'fan', 'FAN21G0548' => 'fan', 'FAN21G1300' => 'fan', 'FAN22G0077' => 'fan', 'FAN22G1315' => 'fan', 'FAN24G1280' => 'fan', 'FAN24G1445' => 'fan', 'FAN24G3527' => 'fan', 'FAN25G0464' => 'fan', 'FAN25G2885' => 'fan', 'FAN25G3270' => 'fan', 'FAN27G1101' => 'fan', 'FAN27G2846' => 'fan', 'FAN27G3524' => 'fan', 'FvH4_2g11770' => 'fve', 'FvH4_2g15630' => 'fve', 'FvH4_3g05570' => 'fve', 'FvH4_3g09110' => 'fve', 'FvH4_3g19940' => 'fve', 'FvH4_4g04821' => 'fve', 'FvH4_4g31480' => 'fve', 'FvH4_7g01740' => 'fve', 'Glyma.05G130400' => 'gma', 'Glyma.05G156400' => 'gma', 'Glyma.07G197000' => 'gma', 'Glyma.08G085151' => 'gma', 'Glyma.08G114500' => 'gma', 'Glyma.08G300400' => 'gma', 'Glyma.10G215800' => 'gma', 'Glyma.12G224400' => 'gma', 'Glyma.13G179300' => 'gma', 'Glyma.13G218151' => 'gma', 'Glyma.13G238800' => 'gma', 'Glyma.13G276900' => 'gma', 'Glyma.14G078200' => 'gma', 'Glyma.15G074500' => 'gma', 'Glyma.15G094100' => 'gma', 'Glyma.17G247200' => 'gma', 'Glyma.18G120100' => 'gma', 'Glyma.20G176000' => 'gma', 'Gohir.A01G063600' => 'ghi', 'Gohir.A01G170301' => 'ghi', 'Gohir.A02G060500' => 'ghi', 'Gohir.A05G133850' => 'ghi', 'Gohir.A05G161400' => 'ghi', 'Gohir.A06G012900' => 'ghi', 'Gohir.A06G035901' => 'ghi', 'Gohir.A06G127100' => 'ghi', 'Gohir.A06G210500' => 'ghi', 'Gohir.A08G008650' => 'ghi', 'Gohir.A09G072700' => 'ghi', 'Gohir.A09G088301' => 'ghi', 'Gohir.A10G040600' => 'ghi', 'Gohir.A12G036300' => 'ghi', 'Gohir.A12G143350' => 'ghi', 'Gohir.A12G165500' => 'ghi', 'Gohir.A13G145700' => 'ghi', 'Gohir.D01G050000' => 'ghi', 'Gohir.D01G051366' => 'ghi', 'Gohir.D01G161350' => 'ghi', 'Gohir.D02G065900' => 'ghi', 'Gohir.D05G164200' => 'ghi', 'Gohir.D05G355500' => 'ghi', 'Gohir.D06G010400' => 'ghi', 'Gohir.D06G111250' => 'ghi', 'Gohir.D06G132000' => 'ghi', 'Gohir.D06G210500' => 'ghi', 'Gohir.D07G165675' => 'ghi', 'Gohir.D08G062240' => 'ghi', 'Gohir.D08G086101' => 'ghi', 'Gohir.D08G138060' => 'ghi', 'Gohir.D09G072300' => 'ghi', 'Gohir.D10G041400' => 'ghi', 'Gohir.D11G191020' => 'ghi', 'Gohir.D11G212066' => 'ghi', 'Gohir.D12G036300' => 'ghi', 'Gohir.D12G168600' => 'ghi', 'Gohir.D13G150600' => 'ghi', 'Gorai.001G057300' => 'gra', 'Gorai.002G069900' => 'gra', 'Gorai.002G200000' => 'gra', 'Gorai.003G067600' => 'gra', 'Gorai.005G074800' => 'gra', 'Gorai.006G087300' => 'gra', 'Gorai.008G037500' => 'gra', 'Gorai.008G181400' => 'gra', 'Gorai.009G169400' => 'gra', 'Gorai.009G387900' => 'gra', 'Gorai.010G013300' => 'gra', 'Gorai.010G153800' => 'gra', 'Gorai.010G255800' => 'gra', 'Gorai.011G043700' => 'gra', 'Gorai.011G198900' => 'gra', 'Gorai.013G168400' => 'gra', 'GSVIVG01005212001' => 'vvi', 'GSVIVG01006163001' => 'vvi', 'GSVIVG01009625001' => 'vvi', 'GSVIVG01014338001' => 'vvi', 'GSVIVG01020005001' => 'vvi', 'GSVIVG01021450001' => 'vvi', 'GSVIVG01023975001' => 'vvi', 'GSVIVG01034490001' => 'vvi', 'HanXRQChr04g0112071' => 'han', 'HanXRQChr05g0131151' => 'han', 'HanXRQChr09g0262371' => 'han', 'HanXRQChr09g0268401' => 'han', 'HanXRQChr10g0279241' => 'han', 'HanXRQChr10g0297961' => 'han', 'HanXRQChr11g0326231' => 'han', 'HanXRQChr11g0328471' => 'han', 'HanXRQChr16g0507941' => 'han', 'HanXRQChr17g0560211' => 'han', 'Haze_02108' => 'cav', 'Haze_02428' => 'cav', 'Haze_05593' => 'cav', 'Haze_06448' => 'cav', 'Haze_09427' => 'cav', 'Haze_12022' => 'cav', 'Haze_17612' => 'cav', 'Haze_17928' => 'cav', 'Hma1.2p1_0032F.1_g019250' => 'hma', 'Hma1.2p1_0163F.1_g072690' => 'hma', 'Hma1.2p1_0265F.1_g106710' => 'hma', 'Hma1.2p1_0286F.1_g113970' => 'hma', 'Hma1.2p1_0363F.1_g136640' => 'hma', 'Hma1.2p1_0584F.1_g183470' => 'hma', 'Hma1.2p1_0885F.1_g232570' => 'hma', 'HPP92_006022' => 'vpl', 'HPP92_007320' => 'vpl', 'HPP92_011521' => 'vpl', 'HPP92_019387' => 'vpl', 'HPP92_024038' => 'vpl', 'Hund05891' => 'sun', 'Hund06450' => 'sun', 'Hund12053' => 'sun', 'Hund16800' => 'sun', 'Hund21222' => 'sun', 'Hund22896' => 'sun', 'Hund23746' => 'sun', 'Hund27083' => 'sun', 'Lalb_Chr02g0141831' => 'lal', 'Lalb_Chr02g0141841' => 'lal', 'Lalb_Chr05g0220411' => 'lal', 'Lalb_Chr06g0162081' => 'lal', 'Lalb_Chr09g0327651' => 'lal', 'Lalb_Chr13g0295051' => 'lal', 'Lalb_Chr15g0086801' => 'lal', 'Lalb_Chr16g0383781' => 'lal', 'Lalb_Chr16g0383791' => 'lal', 'Lalb_Chr18g0055441' => 'lal', 'Lalb_Chr18g0059611' => 'lal', 'Lalb_Chr20g0109661' => 'lal', 'Lalb_Chr20g0109831' => 'lal', 'Lalb_Chr20g0121871' => 'lal', 'Lalb_Chr22g0355361' => 'lal', 'Lalb_Chr25g0286371' => 'lal', 'Lj1A1187G43' => 'lonja', 'Lj1A1205T50' => 'lonja', 'Lj1A800G33' => 'lonja', 'Lj1C1187T7' => 'lonja', 'Lj1C843T11' => 'lonja', 'Lj1g0010940' => 'lja', 'Lj2A288T69' => 'lonja', 'Lj3g0024276' => 'lja', 'Lj4A47T76' => 'lonja', 'Lj4g0005805' => 'lja', 'Lj4g0006097' => 'lja', 'Lj4g0008528' => 'lja', 'Lj4g0024907' => 'lja', 'Lj5g0012472' => 'lja', 'Lj5g0018648' => 'lja', 'Lj6C789G1' => 'lonja', 'Lj6g0004000' => 'lja', 'Lj7A292G67' => 'lonja', 'Lj7A292T64' => 'lonja', 'Lj9A400T58' => 'lonja', 'Lsat_1_v5_gn_1_126181' => 'lsa', 'Lsat_1_v5_gn_4_123041' => 'lsa', 'Lsat_1_v5_gn_4_133620' => 'lsa', 'Lsat_1_v5_gn_4_53221' => 'lsa', 'Lsat_1_v5_gn_4_71961' => 'lsa', 'Lsat_1_v5_gn_7_105241' => 'lsa', 'Lsat_1_v5_gn_7_21361' => 'lsa', 'Lsat_1_v5_gn_7_28860' => 'lsa', 'Lsat_1_v5_gn_7_31260' => 'lsa', 'Lsat_1_v5_gn_8_52801' => 'lsa', 'Manes.02G191400' => 'mes', 'Manes.03G110100' => 'mes', 'Manes.04G071100' => 'mes', 'Manes.05G100500' => 'mes', 'Manes.05G164700' => 'mes', 'Manes.15G087000' => 'mes', 'Manes.15G121500' => 'mes', 'Manes.16G028300' => 'mes', 'Manes.17G046100' => 'mes', 'Manes.17G069800' => 'mes', 'Manes.18G100500' => 'mes', 'Mapoly0002s0109' => 'mpo', 'Mapoly0024s0007' => 'mpo', 'Mapoly0089s0032' => 'mpo', 'MBI04_g42241_MAGBIO' => 'mbi', 'MBI05_g11988_MAGBIO' => 'mbi', 'MBI05_g35452_MAGBIO' => 'mbi', 'MBI07_g30179_MAGBIO' => 'mbi', 'MBI07_g35859_MAGBIO' => 'mbi', 'MBI07_g35860_MAGBIO' => 'mbi', 'MBI07_g37166_MAGBIO' => 'mbi', 'MBI08_g18172_MAGBIO' => 'mbi', 'MBI09_g08441_MAGBIO' => 'mbi', 'MBI13_g01676_MAGBIO' => 'mbi', 'MBI14_g42955_MAGBIO' => 'mbi', 'MBI16_g13161_MAGBIO' => 'mbi', 'MBI17_g27204_MAGBIO' => 'mbi', 'MBI19_g21595_MAGBIO' => 'mbi', 'MD00G1148400' => 'mdo', 'MD02G1301200' => 'mdo', 'MD03G1227800' => 'mdo', 'MD05G1041100' => 'mdo', 'MD05G1124800' => 'mdo', 'MD05G1284000' => 'mdo', 'MD05G1338800' => 'mdo', 'MD05G1338900' => 'mdo', 'MD07G1022800' => 'mdo', 'MD10G1047500' => 'mdo', 'MD10G1127500' => 'mdo', 'MD10G1262300' => 'mdo', 'MD10G1293800' => 'mdo', 'MD16G1074300' => 'mdo', 'Medtr1g021670' => 'mtr', 'Medtr1g096320' => 'mtr', 'Medtr2g013690' => 'mtr', 'Medtr2g019450' => 'mtr', 'Medtr2g085170' => 'mtr', 'Medtr4g088785' => 'mtr', 'Medtr8g055930' => 'mtr', 'Medtr8g085850' => 'mtr', 'MELO3C002605.2' => 'cme', 'MELO3C003891.2' => 'cme', 'MELO3C004012.2' => 'cme', 'MELO3C007134.2' => 'cme', 'MELO3C008118.2' => 'cme', 'MELO3C016700.2' => 'cme', 'MELO3C024127.2' => 'cme', 'MELO3C033361.2' => 'cme', 'MELO3C033362.2' => 'cme', 'Migut.C00430' => 'egut', 'Migut.C01246' => 'egut', 'Migut.E00101' => 'egut', 'Migut.H01486' => 'egut', 'Migut.H01939' => 'egut', 'Migut.K00360' => 'egut', 'Migut.M00910' => 'egut', 'Migut.M01139' => 'egut', 'Migut.N02677' => 'egut', 'MSTRG.13252' => 'ama', 'MSTRG.14701' => 'ama', 'MSTRG.1521' => 'ama', 'MSTRG.15884' => 'ama', 'MSTRG.16242' => 'ama', 'MSTRG.22285' => 'ama', 'MSTRG.22444' => 'ama', 'MSTRG.2349' => 'ama', 'MSTRG.26308' => 'ama', 'MSTRG.28296' => 'ama', 'MSTRG.9895' => 'ama', 'Nitab4.5_0000110g0060' => 'nta', 'Nitab4.5_0000420g0130' => 'nta', 'Nitab4.5_0000422g0030' => 'nta', 'Nitab4.5_0000560g0180' => 'nta', 'Nitab4.5_0000703g0100' => 'nta', 'Nitab4.5_0000786g0200' => 'nta', 'Nitab4.5_0001336g0020' => 'nta', 'Nitab4.5_0001796g0030' => 'nta', 'Nitab4.5_0003348g0060' => 'nta', 'Nitab4.5_0003698g0040' => 'nta', 'Nitab4.5_0003942g0090' => 'nta', 'Nitab4.5_0004775g0070' => 'nta', 'Nitab4.5_0004864g0030' => 'nta', 'Nitab4.5_0005615g0020' => 'nta', 'Nitab4.5_0009288g0030' => 'nta', 'Nitab4.5_0009341g0010' => 'nta', 'Nitab4.5_0009535g0010' => 'nta', 'Nn1g03995' => 'nnu', 'Nn1g04100' => 'nnu', 'Nn1g06530' => 'nnu', 'Nn3g16404' => 'nnu', 'Nn3g17212' => 'nnu', 'Nn3g20776' => 'nnu', 'Nn3g21923' => 'nnu', 'Nn5g27737' => 'nnu', 'Nn5g29461' => 'nnu', 'Nn7g38355' => 'nnu', 'Nn8g39873' => 'nnu', 'Oeu000548.2' => 'oeu', 'Oeu004672.1' => 'oeu', 'Oeu015605.2' => 'oeu', 'Oeu016092.1' => 'oeu', 'Oeu017879.3' => 'oeu', 'Oeu024910.1' => 'oeu', 'Oeu028965.1' => 'oeu', 'Oeu031269.1' => 'oeu', 'Oeu031270.1' => 'oeu', 'Oeu032535.1' => 'oeu', 'Oeu034151.1' => 'oeu', 'Oeu034152.1' => 'oeu', 'Oeu034588.2' => 'oeu', 'Oeu050846.1' => 'oeu', 'Oeu050849.2' => 'oeu', 'Oeu051063.2' => 'oeu', 'Oeu052368.1' => 'oeu', 'Oeu052370.1' => 'oeu', 'Os01g0210400' => 'osa', 'Os01g0304300' => 'osa', 'Os01g0749100' => 'osa', 'Os02g0745800' => 'osa', 'Os03g0769050' => 'osa', 'Os05g0531500' => 'osa', 'Os06g0724300' => 'osa', 'Os11g0198100' => 'osa', 'Peaxi162Scf00069g01425' => 'pax', 'Peaxi162Scf00280g00811' => 'pax', 'Peaxi162Scf00310g00615' => 'pax', 'Peaxi162Scf00362g00542' => 'pax', 'Peaxi162Scf00461g00310' => 'pax', 'Peaxi162Scf00530g00118' => 'pax', 'Peaxi162Scf00541g00057' => 'pax', 'Peaxi162Scf00661g00017' => 'pax', 'Peaxi162Scf00926g00027' => 'pax', 'Peaxi162Scf01064g00263' => 'pax', 'Peaxi162Scf01211g00135' => 'pax', 'PGR004G2336' => 'pgr', 'PGR042G0327' => 'pgr', 'PGR042G1957' => 'pgr', 'PGR042G2003' => 'pgr', 'PGR042G3929' => 'pgr', 'PGR083G1137' => 'pgr', 'PGR083G1364' => 'pgr', 'PGSC0003DMG400003381' => 'stu', 'PGSC0003DMG400003417' => 'stu', 'PGSC0003DMG400008981' => 'stu', 'PGSC0003DMG400012417' => 'stu', 'PGSC0003DMG400012823' => 'stu', 'PGSC0003DMG400016885' => 'stu', 'PGSC0003DMG400022812' => 'stu', 'PGSC0003DMG400029726' => 'stu', 'PGSC0003DMG401009243' => 'stu', 'PGSC0003DMG401031505' => 'stu', 'PGSC0003DMG402031505' => 'stu', 'Phvul.001G017600' => 'pvu', 'Phvul.002G193500' => 'pvu', 'Phvul.002G228900' => 'pvu', 'Phvul.002G236800' => 'pvu', 'Phvul.003G049500' => 'pvu', 'Phvul.005G072000' => 'pvu', 'Phvul.006G164800' => 'pvu', 'Phvul.006G185100' => 'pvu', 'Phvul.007G090000' => 'pvu', 'Potri.001G399800' => 'ptr', 'Potri.002G149900' => 'ptr', 'Potri.004G044100' => 'ptr', 'Potri.004G177600' => 'ptr', 'Potri.009G138000' => 'ptr', 'Potri.010G094000' => 'ptr', 'Potri.011G053000' => 'ptr', 'Potri.011G119300' => 'ptr', 'Potri.013G113700' => 'ptr', 'Potri.018G107800' => 'ptr', 'Potri.019G084100' => 'ptr', 'Pp3c14_23720' => 'ppa', 'Pp3c16_6340' => 'ppa', 'Pp3c23_13420' => 'ppa', 'Pp3c24_2740' => 'ppa', 'Pp3c25_860' => 'ppa', 'Pp3c8_21750' => 'ppa', 'Prupe.1G273000' => 'ppe', 'Prupe.1G273700' => 'ppe', 'Prupe.1G274100' => 'ppe', 'Prupe.2G023300' => 'ppe', 'Prupe.4G048000' => 'ppe', 'Prupe.4G080400' => 'ppe', 'Prupe.4G181200' => 'ppe', 'Prupe.8G056900' => 'ppe', 'Prupe.8G168700' => 'ppe', 'Psat1g189080' => 'psa', 'Psat1g204760' => 'psa', 'Psat4g175560' => 'psa', 'Psat4g177720' => 'psa', 'Psat5g244240' => 'psa', 'Psat6g010720' => 'psa', 'Psat6g187200' => 'psa', 'Psat7g072040' => 'psa', 'PSO017G3501' => 'pso', 'PSO063G2148' => 'pso', 'PSO063G5608' => 'pso', 'PSO210G6392' => 'pso', 'PSO541G2319' => 'pso', 'PSO541G2836' => 'pso', 'PSO541G4012' => 'pso', 'PSO541G6253' => 'pso', 'PSO675G0580' => 'pso', 'PSO675G0856' => 'pso', 'PSO675G5635' => 'pso', 'PSO675G9157' => 'pso', 'PSO832G1660' => 'pso', 'PSO832G1969' => 'pso', 'QL02p007186' => 'qlo', 'QL02p033904' => 'qlo', 'QL03p064391' => 'qlo', 'QL05p040593' => 'qlo', 'QL05p058242' => 'qlo', 'QL08p021825' => 'qlo', 'QL11p004981' => 'qlo', 'RcHm_v2.0_Chr1g0318301' => 'rch', 'RcHm_v2.0_Chr4g0418501' => 'rch', 'RcHm_v2.0_Chr4g0439971' => 'rch', 'RcHm_v2.0_Chr5g0008541' => 'rch', 'RcHm_v2.0_Chr5g0014101' => 'rch', 'RcHm_v2.0_Chr5g0014131' => 'rch', 'RcHm_v2.0_Chr5g0033621' => 'rch', 'RcHm_v2.0_Chr6g0272041' => 'rch', 'RcHm_v2.0_Chr6g0278831' => 'rch', 'Rhsim02G0130400' => 'rsi', 'Rhsim02G0171100' => 'rsi', 'Rhsim05G0053000' => 'rsi', 'Rhsim05G0053100' => 'rsi', 'Rhsim06G0096500' => 'rsi', 'Rhsim06G0096600' => 'rsi', 'Rhsim06G0199100' => 'rsi', 'Rhsim12G0062300' => 'rsi', 'Rhsim12G0062800' => 'rsi', 'Sabra02G0118600' => 'sbr', 'Sabra04G0027300' => 'sbr', 'Sabra04G0119500' => 'sbr', 'Sabra08G0112500' => 'sbr', 'Sabra11G0036800' => 'sbr', 'Sabra11G0103800' => 'sbr', 'Sabra13G0096300' => 'sbr', 'Sabra16G0262300' => 'sbr', 'Sabra18G0091700' => 'sbr', 'Sabra19G0095400' => 'sbr', 'SalBow6G3080' => 'sbo', 'SalBow7G1157' => 'sbo', 'SalBow7G2123' => 'sbo', 'SalBow7G2285' => 'sbo', 'SalBow7G3537' => 'sbo', 'SalBow8G2947' => 'sbo', 'SalBow8G4463' => 'sbo', 'SalBow8G5466' => 'sbo', 'Sc01g0001750' => 'sci', 'Sc02g0006640' => 'sci', 'Sc02g0006670' => 'sci', 'Sc04g0008220' => 'sci', 'Sc05g0006190' => 'sci', 'Sc08g0002760' => 'sci', 'Sc17g0006170' => 'sci', 'Sc22g0002050' => 'sci', 'Sc23g0001190' => 'sci', 'Sc24g0000980' => 'sci', 'Sed0006245' => 'sed', 'Sed0007543' => 'sed', 'Sed0009411' => 'sed', 'Sed0010765' => 'sed', 'Sed0012944' => 'sed', 'Sed0014682' => 'sed', 'Sed0016174' => 'sed', 'Sed0016796' => 'sed', 'Sed0020317' => 'sed', 'Sed0021467' => 'sed', 'SEGI_01316' => 'sgi', 'SEGI_03374' => 'sgi', 'SEGI_16265' => 'sgi', 'SEGI_18569' => 'sgi', 'SEGI_20351' => 'sgi', 'SEGI_26395' => 'sgi', 'SEGI_29469' => 'sgi', 'SEGI_34771' => 'sgi', 'SEGI_36769' => 'sgi', 'SEGI_37139' => 'sgi', 'SGA_v2.0_scaffold100G29687' => 'sas', 'SGA_v2.0_scaffold118G32472' => 'sas', 'SGA_v2.0_scaffold14G07051' => 'sas', 'SGA_v2.0_scaffold183G39845' => 'sas', 'SGA_v2.0_scaffold1G00174' => 'sas', 'SGA_v2.0_scaffold22G09714' => 'sas', 'SGA_v2.0_scaffold333G48992' => 'sas', 'SGA_v2.0_scaffold46G17491' => 'sas', 'SGA_v2.0_scaffold49G18294' => 'sas', 'SGA_v2.0_scaffold63G21658' => 'sas', 'SHI01741' => 'shi', 'SHI05771' => 'shi', 'SHI18077' => 'shi', 'SHI20525' => 'shi', 'SHI20527' => 'shi', 'SHI20528' => 'shi', 'SMO172G0185' => 'smo', 'SMO198G0020' => 'smo', 'SMO351G0006' => 'smo', 'SMO356G0118' => 'smo', 'SMO358G0296' => 'smo', 'SMO367G0079' => 'smo', 'SMO367G1277' => 'smo', 'Solyc01g014220.3' => 'sly', 'Solyc01g111770.2' => 'sly', 'Solyc02g078180.3' => 'sly', 'Solyc03g006430.3' => 'sly', 'Solyc03g006456.1' => 'sly', 'Solyc03g079860.2' => 'sly', 'Solyc04g079770.3' => 'sly', 'Solyc05g007430.4' => 'sly', 'Solyc07g063150.3' => 'sly', 'Solyc08g016620.3' => 'sly', 'Solyc09g057590.3' => 'sly', 'Solyc09g057600.1' => 'sly', 'Solyc10g009050.3' => 'sly', 'Solyc11g017420.2' => 'sly', 'Sopen01g053810' => 'spe', 'Sopen02g023040' => 'spe', 'Sopen03g002440' => 'spe', 'Sopen04g033350' => 'spe', 'Sopen05g003310' => 'spe', 'Sopen07g004050' => 'spe', 'Sopen07g031340' => 'spe', 'Sopen08g006990' => 'spe', 'Sopen10g004830' => 'spe', 'Sopen11g009370' => 'spe', 'Sp1g24450' => 'spa', 'Sp1g29670' => 'spa', 'Sp1g39600' => 'spa', 'Sp2g11080' => 'spa', 'Sp2g13970' => 'spa', 'Sp4g16130' => 'spa', 'Sp6g13080' => 'spa', 'Sp7g37270' => 'spa', 'TAR371G0065' => 'tar', 'TAR376G0340' => 'tar', 'TAR376G0435' => 'tar', 'TAR381G0002' => 'tar', 'TAR381G1236' => 'tar', 'TAR624G0055' => 'tar', 'TAR624G0324' => 'tar', 'TAR624G0696' => 'tar', 'TAR624G0906' => 'tar', 'TAR625G0107' => 'tar', 'TAR626G0015' => 'tar', 'TAR626G1356' => 'tar', 'TAR627G0888' => 'tar', 'TAR628G0399' => 'tar', 'TAR628G1327' => 'tar', 'TAR629G2831' => 'tar', 'TAR629G2874' => 'tar', 'TAR633G1432' => 'tar', 'TAR633G2771' => 'tar', 'THA.LOC104803394' => 'tha', 'THA.LOC104805153' => 'tha', 'THA.LOC104806784' => 'tha', 'THA.LOC104810473' => 'tha', 'THA.LOC104813100' => 'tha', 'THA.LOC104814215' => 'tha', 'THA.LOC104815554' => 'tha', 'THA.LOC104820544' => 'tha', 'THA.LOC104824754' => 'tha', 'THA.LOC104827717' => 'tha', 'Thecc.02G031400' => 'tca', 'Thecc.02G055900' => 'tca', 'Thecc.02G350800' => 'tca', 'Thecc.06G150900' => 'tca', 'Thecc.06G186600' => 'tca', 'Thecc.07G089600' => 'tca', 'Thecc.08G020400' => 'tca', 'Thecc.08G182100' => 'tca', 'Thhalv10000873m.g' => 'esa', 'Thhalv10004185m.g' => 'esa', 'Thhalv10006981m.g' => 'esa', 'Thhalv10007204m.g' => 'esa', 'Thhalv10011374m.g' => 'esa', 'Thhalv10013482m.g' => 'esa', 'Thhalv10017801m.g' => 'esa', 'Thhalv10024983m.g' => 'esa', 'TPR.G12072' => 'tpr', 'TPR.G15769' => 'tpr', 'TPR.G16504' => 'tpr', 'TPR.G16506' => 'tpr', 'TPR.G24345' => 'tpr', 'TPR.G26666' => 'tpr', 'TPR.G27320' => 'tpr', 'TPR.G31819' => 'tpr', 'TPR.G38879' => 'tpr', 'TPR.G39015' => 'tpr', 'TPR.G8819' => 'tpr', 'TWI09G0924' => 'twi', 'TWI12G0811' => 'twi', 'TWI12G1294' => 'twi', 'TWI31G0150' => 'twi', 'TWI36G1262' => 'twi', 'TWI38G1287' => 'twi', 'TWI38G1633' => 'twi', 'TWI38G1982' => 'twi', 'TWI39G0116' => 'twi', 'TWI60G1011' => 'twi', 'TWI63G0171' => 'twi', 'TWI73G0839' => 'twi', 'TWI79G1511' => 'twi', 'unitig_0.g915' => 'ugi', 'unitig_0.g916' => 'ugi', 'unitig_21.g20219' => 'ugi', 'unitig_21.g20416' => 'ugi', 'unitig_578.g16132' => 'ugi', 'unitig_578.g16718' => 'ugi', 'unitig_62.g23481' => 'ugi', 'unitig_744.g24535' => 'ugi', 'unitig_749.g13525' => 'ugi', 'vmacro01248' => 'vma', 'vmacro02290' => 'vma', 'vmacro10946' => 'vma', 'vmacro11865' => 'vma', 'vmacro12493' => 'vma', 'vmacro17322' => 'vma', 'vmacro21599' => 'vma', 'vmacro23041' => 'vma', 'VMungo0251G0004' => 'vmu', 'VMungo0251G2639' => 'vmu', 'VMungo0251G2967' => 'vmu', 'VMungo0540G0864' => 'vmu', 'VMungo0540G1569' => 'vmu', 'VMungo0647G0317' => 'vmu', 'VMungo0720G1373' => 'vmu', 'VMungo0720G1508' => 'vmu', 'VMungo1080G0485' => 'vmu', 'VMungo1215G3177' => 'vmu', 'Zm00001eb112600' => 'zma', 'Zm00001eb120220' => 'zma', 'Zm00001eb153240' => 'zma', 'Zm00001eb168880' => 'zma', 'Zm00001eb213920' => 'zma', 'Zm00001eb228280' => 'zma', 'Zm00001eb254580' => 'zma', 'Zm00001eb272180' => 'zma', 'Zm00001eb293190' => 'zma', 'Zm00001eb322930' => 'zma', 'Zm00001eb353360' => 'zma', 'Zm00001eb353390' => 'zma', 'Zm00001eb353430' => 'zma', 'Zm00001eb353440' => 'zma', 'Zm00001eb353780' => 'zma' ), 'gf_id' => 'HOM05D000499', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000499' ), 'data_identifier' => 'HOM05D000499', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000499', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1066', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p29780' => 'bna', 'A02p33180' => 'bna', 'A03p16470' => 'bna', 'A03p66010' => 'bna', 'A04p25970' => 'bna', 'A06p01270' => 'bna', 'A06p46080' => 'bna', 'A07p11400' => 'bna', 'A08p01840' => 'bna', 'A08p08230' => 'bna', 'A08p25740' => 'bna', 'A09p32070' => 'bna', 'A09p37830' => 'bna', 'A09p42840' => 'bna', 'A09p42850' => 'bna', 'Aa31LG10G2060' => 'aar', 'Aa31LG2G7410' => 'aar', 'Aa31LG6G10200' => 'aar', 'Aa31LG6G16680' => 'aar', 'Aa31LG6G8470' => 'aar', 'Aa31LG9G12730' => 'aar', 'Aa31LG9G13680' => 'aar', 'Aa31LG9G14920' => 'aar', 'Aa31LG9G6650' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4977' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5467' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3254' => 'aag', 'Actinidia02578' => 'ach', 'Actinidia07693' => 'ach', 'Actinidia08413' => 'ach', 'Actinidia08414' => 'ach', 'Actinidia15289' => 'ach', 'Actinidia19871' => 'ach', 'Actinidia21475' => 'ach', 'Actinidia22576' => 'ach', 'Actinidia28327' => 'ach', 'Actinidia32491' => 'ach', 'Actinidia39463' => 'ach', 'Actinidia39571' => 'ach', 'Ah.01g013750' => 'amhyb', 'Ah.01g023210' => 'amhyb', 'Ah.04g164850' => 'amhyb', 'Ah.05g178060' => 'amhyb', 'Ah.07g204270' => 'amhyb', 'Ah.07g208480' => 'amhyb', 'Ah.09g237410' => 'amhyb', 'Ah.14g089460' => 'amhyb', 'AL1G41790' => 'aly', 'AL1G49050' => 'aly', 'AL1G53810' => 'aly', 'AL1G61400' => 'aly', 'AL4G18580' => 'aly', 'AL5G12510' => 'aly', 'AL5G12540' => 'aly', 'AL6G43230' => 'aly', 'AL7G10370' => 'aly', 'AL7G19250' => 'aly', 'AL8G12240' => 'aly', 'AL8G18540' => 'aly', 'Aqoxy1G02409' => 'aox', 'Aqoxy2G03993' => 'aox', 'Aqoxy3G03357' => 'aox', 'Aqoxy4G00785' => 'aox', 'Aqoxy5G02598' => 'aox', 'Aqoxy6G00132' => 'aox', 'Aqoxy7G01776' => 'aox', 'Aqoxy7G02316' => 'aox', 'Aqoxy7G03973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.12AFKW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B8730' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27IQR1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3F75VG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3RE0GA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41TCQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.527VTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FIR39' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5W8UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DA38EV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ63HS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H1I32C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HC27T5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4M8AP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7N3CZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9UVDZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LS1NQA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT1D4B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SKC4TM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCFV76' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF9Q1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQWD9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1ZM88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WE07RT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YCK7VH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJE6Q6' => 'arhy', 'AT1G28240' => 'ath', 'AT1G34550' => 'ath', 'AT1G53040' => 'ath', 'AT2G02910' => 'ath', 'AT4G09630' => 'ath', 'AT4G38500' => 'ath', 'AT5G42660' => 'ath', 'AT5G46220' => 'ath', 'ATR0152G026' => 'atr', 'ATR0564G343' => 'atr', 'ATR0706G151' => 'atr', 'ATR0733G207' => 'atr', 'ATR0751G234' => 'atr', 'ATR0807G048' => 'atr', 'ATR1091G084' => 'atr', 'Atru.chr10.1229' => 'acertr', 'Atru.chr10.1230' => 'acertr', 'Atru.chr10.1874' => 'acertr', 'Atru.chr11.1808' => 'acertr', 'Atru.chr13.1795' => 'acertr', 'Atru.chr13.570' => 'acertr', 'Atru.chr2.2608' => 'acertr', 'Atru.chr2.2609' => 'acertr', 'Atru.chr5.3428' => 'acertr', 'Atru.chr8.1171' => 'acertr', 'AUR62004651' => 'cqu', 'AUR62008675' => 'cqu', 'AUR62010014' => 'cqu', 'AUR62013004' => 'cqu', 'AUR62014825' => 'cqu', 'AUR62015015' => 'cqu', 'AUR62015151' => 'cqu', 'AUR62017020' => 'cqu', 'AUR62019422' => 'cqu', 'AUR62023570' => 'cqu', 'AUR62025571' => 'cqu', 'AUR62029098' => 'cqu', 'AUR62033863' => 'cqu', 'AUR62034296' => 'cqu', 'AUR62040075' => 'cqu', 'BcaB02g07334' => 'bca', 'BcaB02g10575' => 'bca', 'BcaB03g12119' => 'bca', 'BcaB03g12120' => 'bca', 'BcaB03g13945' => 'bca', 'BcaB04g17123' => 'bca', 'BcaB04g17867' => 'bca', 'BcaB04g19839' => 'bca', 'BcaB07g30317' => 'bca', 'BcaB07g32432' => 'bca', 'BcaB07g33362' => 'bca', 'BcaB08g36611' => 'bca', 'BcaC01g00028' => 'bca', 'BcaC01g01356' => 'bca', 'BcaC01g02034' => 'bca', 'BcaC01g06051' => 'bca', 'BcaC03g16839' => 'bca', 'BcaC03g17176' => 'bca', 'BcaC05g26829' => 'bca', 'BcaC06g31490' => 'bca', 'BcaC06g35344' => 'bca', 'BcaC06g36570' => 'bca', 'BcaC07g37537' => 'bca', 'BcaC08g43491' => 'bca', 'BcaC08g43773' => 'bca', 'BcaNung00234' => 'bca', 'BcaNung01982' => 'bca', 'BcaNung03707' => 'bca', 'BcaNung06454' => 'bca', 'BolC2t10762H' => 'bol', 'BolC2t11191H' => 'bol', 'BolC3t14322H' => 'bol', 'BolC3t19747H' => 'bol', 'BolC3t21425H' => 'bol', 'BolC4t27800H' => 'bol', 'BolC5t31423H' => 'bol', 'BolC6t35951H' => 'bol', 'BolC6t36282H' => 'bol', 'BolC7t40678H' => 'bol', 'BolC7t40679H' => 'bol', 'BolC7t42222H' => 'bol', 'BolC7t43492H' => 'bol', 'BolC7t46785H' => 'bol', 'BolC8t47853H' => 'bol', 'BolC9t56805H' => 'bol', 'BraA02t08000Z' => 'bra', 'BraA02t08341Z' => 'bra', 'BraA03t10936Z' => 'bra', 'BraA03t15657Z' => 'bra', 'BraA04t18100Z' => 'bra', 'BraA05t20523Z' => 'bra', 'BraA06t23353Z' => 'bra', 'BraA06t27473Z' => 'bra', 'BraA06t27769Z' => 'bra', 'BraA07t28928Z' => 'bra', 'BraA08t32236Z' => 'bra', 'BraA08t32841Z' => 'bra', 'BraA08t34524Z' => 'bra', 'BraA09t38742Z' => 'bra', 'BraA09t39295Z' => 'bra', 'C02p47180' => 'bna', 'C02p50990' => 'bna', 'C03p19360' => 'bna', 'C03p74950' => 'bna', 'C03p91000' => 'bna', 'C04p63260' => 'bna', 'C05p27050' => 'bna', 'C06p08750' => 'bna', 'C06p11490' => 'bna', 'C07p02820' => 'bna', 'C07p17180' => 'bna', 'C07p29440' => 'bna', 'C07p63730' => 'bna', 'C09p39260' => 'bna', 'CAN.G1164.34' => 'can', 'CAN.G1164.39' => 'can', 'CAN.G1530.3' => 'can', 'CAN.G162.61' => 'can', 'CAN.G176.6' => 'can', 'CAN.G289.49' => 'can', 'CAN.G370.21' => 'can', 'CAN.G370.22' => 'can', 'CAN.G371.117' => 'can', 'CAN.G58.37' => 'can', 'CAN.G588.98' => 'can', 'CANSAT21G2266' => 'cansat', 'CANSAT25G2799' => 'cansat', 'CANSAT35G0862' => 'cansat', 'CANSAT35G1704' => 'cansat', 'CANSAT35G1760' => 'cansat', 'CANSAT56G3971' => 'cansat', 'CANSAT56G4116' => 'cansat', 'CANSAT80G1259' => 'cansat', 'CARHR027730' => 'chi', 'CARHR033880' => 'chi', 'CARHR043270' => 'chi', 'CARHR145330' => 'chi', 'CARHR145340' => 'chi', 'CARHR175570' => 'chi', 'CARHR181570' => 'chi', 'CARHR258470' => 'chi', 'CARHR260490' => 'chi', 'CARHR294220' => 'chi', 'Carub.0001s2668' => 'cru', 'Carub.0001s3257' => 'cru', 'Carub.0001s4220' => 'cru', 'Carub.0005s0179' => 'cru', 'Carub.0006s2807' => 'cru', 'Carub.0007s0039' => 'cru', 'Carub.0008s0169' => 'cru', 'Carub.0008s0636' => 'cru', 'Ca_00338_v3' => 'car', 'Ca_00542_v3' => 'car', 'Ca_01844_v3' => 'car', 'Ca_10611_v3' => 'car', 'Ca_13326_v3' => 'car', 'Ca_17944_v3' => 'car', 'Ca_18546_v3' => 'car', 'Ca_24219_v3' => 'car', 'Ca_29972_v3' => 'car', 'CBR_g3681' => 'cbr', 'CBR_g40021' => 'cbr', 'Cc01_g08140' => 'ccan', 'Cc02_g13410' => 'ccan', 'Cc02_g37480' => 'ccan', 'Cc05_g12030' => 'ccan', 'Cc09_g03370' => 'ccan', 'Cc09_g10300' => 'ccan', 'Cc10_g03530' => 'ccan', 'Cc10_g11380' => 'ccan', 'CDE01G0176' => 'cde', 'CDE02G0675' => 'cde', 'CDE02G0942' => 'cde', 'CDE02G1153' => 'cde', 'CDE02G4177' => 'cde', 'CDE04G2117' => 'cde', 'CDE04G2736' => 'cde', 'CDE08G1161' => 'cde', 'CDE09G1238' => 'cde', 'Cfa000467' => 'cfa', 'Cfa000947' => 'cfa', 'Cfa004969' => 'cfa', 'Cfa005284' => 'cfa', 'Cfa008993' => 'cfa', 'Cfa018187' => 'cfa', 'Cfa018454' => 'cfa', 'Cfa020585' => 'cfa', 'Ciclev10000424m.g' => 'ccl', 'Ciclev10003605m.g' => 'ccl', 'Ciclev10007828m.g' => 'ccl', 'Ciclev10014620m.g' => 'ccl', 'Ciclev10015169m.g' => 'ccl', 'Ciclev10018291m.g' => 'ccl', 'Ciclev10028256m.g' => 'ccl', 'Ciclev10033822m.g' => 'ccl', 'CiPaw.05G060300' => 'cil', 'CiPaw.05G085000' => 'cil', 'CiPaw.06G083700' => 'cil', 'CiPaw.06G120300' => 'cil', 'CiPaw.09G060500' => 'cil', 'CiPaw.09G123800' => 'cil', 'CiPaw.11G169700' => 'cil', 'CiPaw.12G118300' => 'cil', 'CiPaw.15G071000' => 'cil', 'CiPaw.15G081900' => 'cil', 'ClCG01G024610' => 'cla', 'ClCG03G006070' => 'cla', 'ClCG05G019250' => 'cla', 'ClCG09G009500' => 'cla', 'ClCG11G008200' => 'cla', 'ClCG11G018080' => 'cla', 'COL.COLO4_17373' => 'col', 'COL.COLO4_22994' => 'col', 'COL.COLO4_26389' => 'col', 'COL.COLO4_27170' => 'col', 'COL.COLO4_31074' => 'col', 'COL.COLO4_31465' => 'col', 'COL.COLO4_36438' => 'col', 'COL.COLO4_36439' => 'col', 'Cpa.g.c38781' => 'cpa', 'Cpa.g.sc128.12' => 'cpa', 'Cpa.g.sc166.7' => 'cpa', 'Cpa.g.sc166.8' => 'cpa', 'Cpa.g.sc20.111' => 'cpa', 'Cpa.g.sc27.31' => 'cpa', 'Cpa.g.sc64.36' => 'cpa', 'Cpa.g.sc64.37' => 'cpa', 'Cpa.g.sc66.49' => 'cpa', 'Cpa.g.sc80.64' => 'cpa', 'CsaV3_1G012320' => 'csa', 'CsaV3_2G008480' => 'csa', 'CsaV3_2G033450' => 'csa', 'CsaV3_3G044830' => 'csa', 'CsaV3_4G033710' => 'csa', 'CsaV3_6G051730' => 'csa', 'CsaV3_7G025350' => 'csa', 'CSS0001067' => 'camsi', 'CSS0005996' => 'camsi', 'CSS0006590' => 'camsi', 'CSS0009673' => 'camsi', 'CSS0010201' => 'camsi', 'CSS0010549' => 'camsi', 'CSS0011364' => 'camsi', 'CSS0014473' => 'camsi', 'CSS0014961' => 'camsi', 'CSS0020191' => 'camsi', 'CSS0021165' => 'camsi', 'CSS0022306' => 'camsi', 'CSS0030591' => 'camsi', 'CSS0030696' => 'camsi', 'CSS0032653' => 'camsi', 'CSS0037487' => 'camsi', 'CSS0041102' => 'camsi', 'CSS0041261' => 'camsi', 'CSS0046246' => 'camsi', 'CSS0049256' => 'camsi', 'DCAR_004075' => 'dca', 'DCAR_011538' => 'dca', 'DCAR_019553' => 'dca', 'DCAR_020952' => 'dca', 'DCAR_021739' => 'dca', 'DCAR_027407' => 'dca', 'DCAR_027913' => 'dca', 'DCAR_028066' => 'dca', 'Dinv05899' => 'din', 'Dinv07563' => 'din', 'Dinv08010' => 'din', 'Dinv14125' => 'din', 'Dinv20172' => 'din', 'Dinv30743' => 'din', 'Dinv31229' => 'din', 'Dinv34162' => 'din', 'Dinv36028' => 'din', 'Dinv39368' => 'din', 'Dinv40565' => 'din', 'Dinv41706' => 'din', 'Duzib052G0089' => 'dzi', 'Duzib116G0641' => 'dzi', 'Duzib132G0069' => 'dzi', 'Duzib132G1219' => 'dzi', 'Duzib147G0278' => 'dzi', 'Duzib160G0480' => 'dzi', 'Duzib170G0661' => 'dzi', 'Duzib177G0591' => 'dzi', 'Duzib187G1353' => 'dzi', 'Duzib192G0858' => 'dzi', 'Duzib192G0883' => 'dzi', 'Duzib213G0506' => 'dzi', 'Duzib235G0289' => 'dzi', 'Duzib251G0422' => 'dzi', 'ECA232G3898' => 'eca', 'ECA233G5950' => 'eca', 'ECA234G1699' => 'eca', 'ECA234G2421' => 'eca', 'ECA236G0426' => 'eca', 'ECA236G4331' => 'eca', 'ECA248G2573' => 'eca', 'EL10Ac1g00077' => 'bvu', 'EL10Ac1g01746' => 'bvu', 'EL10Ac2g03464' => 'bvu', 'EL10Ac4g08176' => 'bvu', 'EL10Ac7g17521' => 'bvu', 'EL10Ac8g20386' => 'bvu', 'EL10Ac9g21343' => 'bvu', 'EL10Ac9g22688' => 'bvu', 'Eucgr.B03434' => 'egr', 'Eucgr.D00618' => 'egr', 'Eucgr.E02395' => 'egr', 'Eucgr.F01129' => 'egr', 'Eucgr.F02622' => 'egr', 'Eucgr.F04207' => 'egr', 'FAN01G0570' => 'fan', 'FAN03G3351' => 'fan', 'FAN06G3702' => 'fan', 'FAN07G2149' => 'fan', 'FAN10G3758' => 'fan', 'FAN11G1170' => 'fan', 'FAN11G2050' => 'fan', 'FAN11G2724' => 'fan', 'FAN12G1700' => 'fan', 'FAN12G2028' => 'fan', 'FAN15G1160' => 'fan', 'FAN15G3063' => 'fan', 'FAN16G2540' => 'fan', 'FAN16G3077' => 'fan', 'FAN16G3624' => 'fan', 'FAN17G0221' => 'fan', 'FAN20G2492' => 'fan', 'FAN20G2905' => 'fan', 'FAN21G0548' => 'fan', 'FAN21G1300' => 'fan', 'FAN22G0077' => 'fan', 'FAN22G1315' => 'fan', 'FAN24G1280' => 'fan', 'FAN24G1445' => 'fan', 'FAN24G3527' => 'fan', 'FAN25G0464' => 'fan', 'FAN25G2885' => 'fan', 'FAN25G3270' => 'fan', 'FAN27G1101' => 'fan', 'FAN27G2846' => 'fan', 'FAN27G3524' => 'fan', 'FvH4_2g11770' => 'fve', 'FvH4_2g15630' => 'fve', 'FvH4_3g05570' => 'fve', 'FvH4_3g09110' => 'fve', 'FvH4_3g19940' => 'fve', 'FvH4_4g04821' => 'fve', 'FvH4_4g31480' => 'fve', 'FvH4_7g01740' => 'fve', 'Glyma.05G130400' => 'gma', 'Glyma.05G156400' => 'gma', 'Glyma.07G197000' => 'gma', 'Glyma.08G085151' => 'gma', 'Glyma.08G114500' => 'gma', 'Glyma.08G300400' => 'gma', 'Glyma.10G215800' => 'gma', 'Glyma.12G224400' => 'gma', 'Glyma.13G179300' => 'gma', 'Glyma.13G218151' => 'gma', 'Glyma.13G238800' => 'gma', 'Glyma.13G276900' => 'gma', 'Glyma.14G078200' => 'gma', 'Glyma.15G074500' => 'gma', 'Glyma.15G094100' => 'gma', 'Glyma.17G247200' => 'gma', 'Glyma.18G120100' => 'gma', 'Glyma.20G176000' => 'gma', 'Gohir.A01G063600' => 'ghi', 'Gohir.A01G170301' => 'ghi', 'Gohir.A02G060500' => 'ghi', 'Gohir.A05G133850' => 'ghi', 'Gohir.A05G161400' => 'ghi', 'Gohir.A06G012900' => 'ghi', 'Gohir.A06G035901' => 'ghi', 'Gohir.A06G127100' => 'ghi', 'Gohir.A06G210500' => 'ghi', 'Gohir.A08G008650' => 'ghi', 'Gohir.A09G072700' => 'ghi', 'Gohir.A09G088301' => 'ghi', 'Gohir.A10G040600' => 'ghi', 'Gohir.A12G036300' => 'ghi', 'Gohir.A12G143350' => 'ghi', 'Gohir.A12G165500' => 'ghi', 'Gohir.A13G145700' => 'ghi', 'Gohir.D01G050000' => 'ghi', 'Gohir.D01G051366' => 'ghi', 'Gohir.D01G161350' => 'ghi', 'Gohir.D02G065900' => 'ghi', 'Gohir.D05G164200' => 'ghi', 'Gohir.D05G355500' => 'ghi', 'Gohir.D06G010400' => 'ghi', 'Gohir.D06G111250' => 'ghi', 'Gohir.D06G132000' => 'ghi', 'Gohir.D06G210500' => 'ghi', 'Gohir.D07G165675' => 'ghi', 'Gohir.D08G062240' => 'ghi', 'Gohir.D08G086101' => 'ghi', 'Gohir.D08G138060' => 'ghi', 'Gohir.D09G072300' => 'ghi', 'Gohir.D10G041400' => 'ghi', 'Gohir.D11G191020' => 'ghi', 'Gohir.D11G212066' => 'ghi', 'Gohir.D12G036300' => 'ghi', 'Gohir.D12G168600' => 'ghi', 'Gohir.D13G150600' => 'ghi', 'Gorai.001G057300' => 'gra', 'Gorai.002G069900' => 'gra', 'Gorai.002G200000' => 'gra', 'Gorai.003G067600' => 'gra', 'Gorai.005G074800' => 'gra', 'Gorai.006G087300' => 'gra', 'Gorai.008G037500' => 'gra', 'Gorai.008G181400' => 'gra', 'Gorai.009G169400' => 'gra', 'Gorai.009G387900' => 'gra', 'Gorai.010G013300' => 'gra', 'Gorai.010G153800' => 'gra', 'Gorai.010G255800' => 'gra', 'Gorai.011G043700' => 'gra', 'Gorai.011G198900' => 'gra', 'Gorai.013G168400' => 'gra', 'GSVIVG01005212001' => 'vvi', 'GSVIVG01006163001' => 'vvi', 'GSVIVG01009625001' => 'vvi', 'GSVIVG01014338001' => 'vvi', 'GSVIVG01020005001' => 'vvi', 'GSVIVG01021450001' => 'vvi', 'GSVIVG01023975001' => 'vvi', 'GSVIVG01034490001' => 'vvi', 'HanXRQChr04g0112071' => 'han', 'HanXRQChr05g0131151' => 'han', 'HanXRQChr09g0262371' => 'han', 'HanXRQChr09g0268401' => 'han', 'HanXRQChr10g0279241' => 'han', 'HanXRQChr10g0297961' => 'han', 'HanXRQChr11g0326231' => 'han', 'HanXRQChr11g0328471' => 'han', 'HanXRQChr16g0507941' => 'han', 'HanXRQChr17g0560211' => 'han', 'Haze_02108' => 'cav', 'Haze_02428' => 'cav', 'Haze_05593' => 'cav', 'Haze_06448' => 'cav', 'Haze_09427' => 'cav', 'Haze_12022' => 'cav', 'Haze_17612' => 'cav', 'Haze_17928' => 'cav', 'Hma1.2p1_0032F.1_g019250' => 'hma', 'Hma1.2p1_0163F.1_g072690' => 'hma', 'Hma1.2p1_0265F.1_g106710' => 'hma', 'Hma1.2p1_0286F.1_g113970' => 'hma', 'Hma1.2p1_0363F.1_g136640' => 'hma', 'Hma1.2p1_0584F.1_g183470' => 'hma', 'Hma1.2p1_0885F.1_g232570' => 'hma', 'HPP92_006022' => 'vpl', 'HPP92_007320' => 'vpl', 'HPP92_011521' => 'vpl', 'HPP92_019387' => 'vpl', 'HPP92_024038' => 'vpl', 'Hund05891' => 'sun', 'Hund06450' => 'sun', 'Hund12053' => 'sun', 'Hund16800' => 'sun', 'Hund21222' => 'sun', 'Hund22896' => 'sun', 'Hund23746' => 'sun', 'Hund27083' => 'sun', 'Lalb_Chr02g0141831' => 'lal', 'Lalb_Chr02g0141841' => 'lal', 'Lalb_Chr05g0220411' => 'lal', 'Lalb_Chr06g0162081' => 'lal', 'Lalb_Chr09g0327651' => 'lal', 'Lalb_Chr13g0295051' => 'lal', 'Lalb_Chr15g0086801' => 'lal', 'Lalb_Chr16g0383781' => 'lal', 'Lalb_Chr16g0383791' => 'lal', 'Lalb_Chr18g0055441' => 'lal', 'Lalb_Chr18g0059611' => 'lal', 'Lalb_Chr20g0109661' => 'lal', 'Lalb_Chr20g0109831' => 'lal', 'Lalb_Chr20g0121871' => 'lal', 'Lalb_Chr22g0355361' => 'lal', 'Lalb_Chr25g0286371' => 'lal', 'Lj1A1187G43' => 'lonja', 'Lj1A1205T50' => 'lonja', 'Lj1A800G33' => 'lonja', 'Lj1C1187T7' => 'lonja', 'Lj1C843T11' => 'lonja', 'Lj1g0010940' => 'lja', 'Lj2A288T69' => 'lonja', 'Lj3g0024276' => 'lja', 'Lj4A47T76' => 'lonja', 'Lj4g0005805' => 'lja', 'Lj4g0006097' => 'lja', 'Lj4g0008528' => 'lja', 'Lj4g0024907' => 'lja', 'Lj5g0012472' => 'lja', 'Lj5g0018648' => 'lja', 'Lj6C789G1' => 'lonja', 'Lj6g0004000' => 'lja', 'Lj7A292G67' => 'lonja', 'Lj7A292T64' => 'lonja', 'Lj9A400T58' => 'lonja', 'Lsat_1_v5_gn_1_126181' => 'lsa', 'Lsat_1_v5_gn_4_123041' => 'lsa', 'Lsat_1_v5_gn_4_133620' => 'lsa', 'Lsat_1_v5_gn_4_53221' => 'lsa', 'Lsat_1_v5_gn_4_71961' => 'lsa', 'Lsat_1_v5_gn_7_105241' => 'lsa', 'Lsat_1_v5_gn_7_21361' => 'lsa', 'Lsat_1_v5_gn_7_28860' => 'lsa', 'Lsat_1_v5_gn_7_31260' => 'lsa', 'Lsat_1_v5_gn_8_52801' => 'lsa', 'Manes.02G191400' => 'mes', 'Manes.03G110100' => 'mes', 'Manes.04G071100' => 'mes', 'Manes.05G100500' => 'mes', 'Manes.05G164700' => 'mes', 'Manes.15G087000' => 'mes', 'Manes.15G121500' => 'mes', 'Manes.16G028300' => 'mes', 'Manes.17G046100' => 'mes', 'Manes.17G069800' => 'mes', 'Manes.18G100500' => 'mes', 'Mapoly0002s0109' => 'mpo', 'Mapoly0024s0007' => 'mpo', 'Mapoly0089s0032' => 'mpo', 'MBI04_g42241_MAGBIO' => 'mbi', 'MBI05_g11988_MAGBIO' => 'mbi', 'MBI05_g35452_MAGBIO' => 'mbi', 'MBI07_g30179_MAGBIO' => 'mbi', 'MBI07_g35859_MAGBIO' => 'mbi', 'MBI07_g35860_MAGBIO' => 'mbi', 'MBI07_g37166_MAGBIO' => 'mbi', 'MBI08_g18172_MAGBIO' => 'mbi', 'MBI09_g08441_MAGBIO' => 'mbi', 'MBI13_g01676_MAGBIO' => 'mbi', 'MBI14_g42955_MAGBIO' => 'mbi', 'MBI16_g13161_MAGBIO' => 'mbi', 'MBI17_g27204_MAGBIO' => 'mbi', 'MBI19_g21595_MAGBIO' => 'mbi', 'MD00G1148400' => 'mdo', 'MD02G1301200' => 'mdo', 'MD03G1227800' => 'mdo', 'MD05G1041100' => 'mdo', 'MD05G1124800' => 'mdo', 'MD05G1284000' => 'mdo', 'MD05G1338800' => 'mdo', 'MD05G1338900' => 'mdo', 'MD07G1022800' => 'mdo', 'MD10G1047500' => 'mdo', 'MD10G1127500' => 'mdo', 'MD10G1262300' => 'mdo', 'MD10G1293800' => 'mdo', 'MD16G1074300' => 'mdo', 'Medtr1g021670' => 'mtr', 'Medtr1g096320' => 'mtr', 'Medtr2g013690' => 'mtr', 'Medtr2g019450' => 'mtr', 'Medtr2g085170' => 'mtr', 'Medtr4g088785' => 'mtr', 'Medtr8g055930' => 'mtr', 'Medtr8g085850' => 'mtr', 'MELO3C002605.2' => 'cme', 'MELO3C003891.2' => 'cme', 'MELO3C004012.2' => 'cme', 'MELO3C007134.2' => 'cme', 'MELO3C008118.2' => 'cme', 'MELO3C016700.2' => 'cme', 'MELO3C024127.2' => 'cme', 'MELO3C033361.2' => 'cme', 'MELO3C033362.2' => 'cme', 'Migut.C00430' => 'egut', 'Migut.C01246' => 'egut', 'Migut.E00101' => 'egut', 'Migut.H01486' => 'egut', 'Migut.H01939' => 'egut', 'Migut.K00360' => 'egut', 'Migut.M00910' => 'egut', 'Migut.M01139' => 'egut', 'Migut.N02677' => 'egut', 'MSTRG.13252' => 'ama', 'MSTRG.14701' => 'ama', 'MSTRG.1521' => 'ama', 'MSTRG.15884' => 'ama', 'MSTRG.16242' => 'ama', 'MSTRG.22285' => 'ama', 'MSTRG.22444' => 'ama', 'MSTRG.2349' => 'ama', 'MSTRG.26308' => 'ama', 'MSTRG.28296' => 'ama', 'MSTRG.9895' => 'ama', 'Nitab4.5_0000110g0060' => 'nta', 'Nitab4.5_0000420g0130' => 'nta', 'Nitab4.5_0000422g0030' => 'nta', 'Nitab4.5_0000560g0180' => 'nta', 'Nitab4.5_0000703g0100' => 'nta', 'Nitab4.5_0000786g0200' => 'nta', 'Nitab4.5_0001336g0020' => 'nta', 'Nitab4.5_0001796g0030' => 'nta', 'Nitab4.5_0003348g0060' => 'nta', 'Nitab4.5_0003698g0040' => 'nta', 'Nitab4.5_0003942g0090' => 'nta', 'Nitab4.5_0004775g0070' => 'nta', 'Nitab4.5_0004864g0030' => 'nta', 'Nitab4.5_0005615g0020' => 'nta', 'Nitab4.5_0009288g0030' => 'nta', 'Nitab4.5_0009341g0010' => 'nta', 'Nitab4.5_0009535g0010' => 'nta', 'Nn1g03995' => 'nnu', 'Nn1g04100' => 'nnu', 'Nn1g06530' => 'nnu', 'Nn3g16404' => 'nnu', 'Nn3g17212' => 'nnu', 'Nn3g20776' => 'nnu', 'Nn3g21923' => 'nnu', 'Nn5g27737' => 'nnu', 'Nn5g29461' => 'nnu', 'Nn7g38355' => 'nnu', 'Nn8g39873' => 'nnu', 'Oeu000548.2' => 'oeu', 'Oeu004672.1' => 'oeu', 'Oeu015605.2' => 'oeu', 'Oeu016092.1' => 'oeu', 'Oeu017879.3' => 'oeu', 'Oeu024910.1' => 'oeu', 'Oeu028965.1' => 'oeu', 'Oeu031269.1' => 'oeu', 'Oeu031270.1' => 'oeu', 'Oeu032535.1' => 'oeu', 'Oeu034151.1' => 'oeu', 'Oeu034152.1' => 'oeu', 'Oeu034588.2' => 'oeu', 'Oeu050846.1' => 'oeu', 'Oeu050849.2' => 'oeu', 'Oeu051063.2' => 'oeu', 'Oeu052368.1' => 'oeu', 'Oeu052370.1' => 'oeu', 'Os01g0210400' => 'osa', 'Os01g0304300' => 'osa', 'Os01g0749100' => 'osa', 'Os02g0745800' => 'osa', 'Os03g0769050' => 'osa', 'Os05g0531500' => 'osa', 'Os06g0724300' => 'osa', 'Os11g0198100' => 'osa', 'Peaxi162Scf00069g01425' => 'pax', 'Peaxi162Scf00280g00811' => 'pax', 'Peaxi162Scf00310g00615' => 'pax', 'Peaxi162Scf00362g00542' => 'pax', 'Peaxi162Scf00461g00310' => 'pax', 'Peaxi162Scf00530g00118' => 'pax', 'Peaxi162Scf00541g00057' => 'pax', 'Peaxi162Scf00661g00017' => 'pax', 'Peaxi162Scf00926g00027' => 'pax', 'Peaxi162Scf01064g00263' => 'pax', 'Peaxi162Scf01211g00135' => 'pax', 'PGR004G2336' => 'pgr', 'PGR042G0327' => 'pgr', 'PGR042G1957' => 'pgr', 'PGR042G2003' => 'pgr', 'PGR042G3929' => 'pgr', 'PGR083G1137' => 'pgr', 'PGR083G1364' => 'pgr', 'PGSC0003DMG400003381' => 'stu', 'PGSC0003DMG400003417' => 'stu', 'PGSC0003DMG400008981' => 'stu', 'PGSC0003DMG400012417' => 'stu', 'PGSC0003DMG400012823' => 'stu', 'PGSC0003DMG400016885' => 'stu', 'PGSC0003DMG400022812' => 'stu', 'PGSC0003DMG400029726' => 'stu', 'PGSC0003DMG401009243' => 'stu', 'PGSC0003DMG401031505' => 'stu', 'PGSC0003DMG402031505' => 'stu', 'Phvul.001G017600' => 'pvu', 'Phvul.002G193500' => 'pvu', 'Phvul.002G228900' => 'pvu', 'Phvul.002G236800' => 'pvu', 'Phvul.003G049500' => 'pvu', 'Phvul.005G072000' => 'pvu', 'Phvul.006G164800' => 'pvu', 'Phvul.006G185100' => 'pvu', 'Phvul.007G090000' => 'pvu', 'Potri.001G399800' => 'ptr', 'Potri.002G149900' => 'ptr', 'Potri.004G044100' => 'ptr', 'Potri.004G177600' => 'ptr', 'Potri.009G138000' => 'ptr', 'Potri.010G094000' => 'ptr', 'Potri.011G053000' => 'ptr', 'Potri.011G119300' => 'ptr', 'Potri.013G113700' => 'ptr', 'Potri.018G107800' => 'ptr', 'Potri.019G084100' => 'ptr', 'Pp3c14_23720' => 'ppa', 'Pp3c16_6340' => 'ppa', 'Pp3c23_13420' => 'ppa', 'Pp3c24_2740' => 'ppa', 'Pp3c25_860' => 'ppa', 'Pp3c8_21750' => 'ppa', 'Prupe.1G273000' => 'ppe', 'Prupe.1G273700' => 'ppe', 'Prupe.1G274100' => 'ppe', 'Prupe.2G023300' => 'ppe', 'Prupe.4G048000' => 'ppe', 'Prupe.4G080400' => 'ppe', 'Prupe.4G181200' => 'ppe', 'Prupe.8G056900' => 'ppe', 'Prupe.8G168700' => 'ppe', 'Psat1g189080' => 'psa', 'Psat1g204760' => 'psa', 'Psat4g175560' => 'psa', 'Psat4g177720' => 'psa', 'Psat5g244240' => 'psa', 'Psat6g010720' => 'psa', 'Psat6g187200' => 'psa', 'Psat7g072040' => 'psa', 'PSO017G3501' => 'pso', 'PSO063G2148' => 'pso', 'PSO063G5608' => 'pso', 'PSO210G6392' => 'pso', 'PSO541G2319' => 'pso', 'PSO541G2836' => 'pso', 'PSO541G4012' => 'pso', 'PSO541G6253' => 'pso', 'PSO675G0580' => 'pso', 'PSO675G0856' => 'pso', 'PSO675G5635' => 'pso', 'PSO675G9157' => 'pso', 'PSO832G1660' => 'pso', 'PSO832G1969' => 'pso', 'QL02p007186' => 'qlo', 'QL02p033904' => 'qlo', 'QL03p064391' => 'qlo', 'QL05p040593' => 'qlo', 'QL05p058242' => 'qlo', 'QL08p021825' => 'qlo', 'QL11p004981' => 'qlo', 'RcHm_v2.0_Chr1g0318301' => 'rch', 'RcHm_v2.0_Chr4g0418501' => 'rch', 'RcHm_v2.0_Chr4g0439971' => 'rch', 'RcHm_v2.0_Chr5g0008541' => 'rch', 'RcHm_v2.0_Chr5g0014101' => 'rch', 'RcHm_v2.0_Chr5g0014131' => 'rch', 'RcHm_v2.0_Chr5g0033621' => 'rch', 'RcHm_v2.0_Chr6g0272041' => 'rch', 'RcHm_v2.0_Chr6g0278831' => 'rch', 'Rhsim02G0130400' => 'rsi', 'Rhsim02G0171100' => 'rsi', 'Rhsim05G0053000' => 'rsi', 'Rhsim05G0053100' => 'rsi', 'Rhsim06G0096500' => 'rsi', 'Rhsim06G0096600' => 'rsi', 'Rhsim06G0199100' => 'rsi', 'Rhsim12G0062300' => 'rsi', 'Rhsim12G0062800' => 'rsi', 'Sabra02G0118600' => 'sbr', 'Sabra04G0027300' => 'sbr', 'Sabra04G0119500' => 'sbr', 'Sabra08G0112500' => 'sbr', 'Sabra11G0036800' => 'sbr', 'Sabra11G0103800' => 'sbr', 'Sabra13G0096300' => 'sbr', 'Sabra16G0262300' => 'sbr', 'Sabra18G0091700' => 'sbr', 'Sabra19G0095400' => 'sbr', 'SalBow6G3080' => 'sbo', 'SalBow7G1157' => 'sbo', 'SalBow7G2123' => 'sbo', 'SalBow7G2285' => 'sbo', 'SalBow7G3537' => 'sbo', 'SalBow8G2947' => 'sbo', 'SalBow8G4463' => 'sbo', 'SalBow8G5466' => 'sbo', 'Sc01g0001750' => 'sci', 'Sc02g0006640' => 'sci', 'Sc02g0006670' => 'sci', 'Sc04g0008220' => 'sci', 'Sc05g0006190' => 'sci', 'Sc08g0002760' => 'sci', 'Sc17g0006170' => 'sci', 'Sc22g0002050' => 'sci', 'Sc23g0001190' => 'sci', 'Sc24g0000980' => 'sci', 'Sed0006245' => 'sed', 'Sed0007543' => 'sed', 'Sed0009411' => 'sed', 'Sed0010765' => 'sed', 'Sed0012944' => 'sed', 'Sed0014682' => 'sed', 'Sed0016174' => 'sed', 'Sed0016796' => 'sed', 'Sed0020317' => 'sed', 'Sed0021467' => 'sed', 'SEGI_01316' => 'sgi', 'SEGI_03374' => 'sgi', 'SEGI_16265' => 'sgi', 'SEGI_18569' => 'sgi', 'SEGI_20351' => 'sgi', 'SEGI_26395' => 'sgi', 'SEGI_29469' => 'sgi', 'SEGI_34771' => 'sgi', 'SEGI_36769' => 'sgi', 'SEGI_37139' => 'sgi', 'SGA_v2.0_scaffold100G29687' => 'sas', 'SGA_v2.0_scaffold118G32472' => 'sas', 'SGA_v2.0_scaffold14G07051' => 'sas', 'SGA_v2.0_scaffold183G39845' => 'sas', 'SGA_v2.0_scaffold1G00174' => 'sas', 'SGA_v2.0_scaffold22G09714' => 'sas', 'SGA_v2.0_scaffold333G48992' => 'sas', 'SGA_v2.0_scaffold46G17491' => 'sas', 'SGA_v2.0_scaffold49G18294' => 'sas', 'SGA_v2.0_scaffold63G21658' => 'sas', 'SHI01741' => 'shi', 'SHI05771' => 'shi', 'SHI18077' => 'shi', 'SHI20525' => 'shi', 'SHI20527' => 'shi', 'SHI20528' => 'shi', 'SMO172G0185' => 'smo', 'SMO198G0020' => 'smo', 'SMO351G0006' => 'smo', 'SMO356G0118' => 'smo', 'SMO358G0296' => 'smo', 'SMO367G0079' => 'smo', 'SMO367G1277' => 'smo', 'Solyc01g014220.3' => 'sly', 'Solyc01g111770.2' => 'sly', 'Solyc02g078180.3' => 'sly', 'Solyc03g006430.3' => 'sly', 'Solyc03g006456.1' => 'sly', 'Solyc03g079860.2' => 'sly', 'Solyc04g079770.3' => 'sly', 'Solyc05g007430.4' => 'sly', 'Solyc07g063150.3' => 'sly', 'Solyc08g016620.3' => 'sly', 'Solyc09g057590.3' => 'sly', 'Solyc09g057600.1' => 'sly', 'Solyc10g009050.3' => 'sly', 'Solyc11g017420.2' => 'sly', 'Sopen01g053810' => 'spe', 'Sopen02g023040' => 'spe', 'Sopen03g002440' => 'spe', 'Sopen04g033350' => 'spe', 'Sopen05g003310' => 'spe', 'Sopen07g004050' => 'spe', 'Sopen07g031340' => 'spe', 'Sopen08g006990' => 'spe', 'Sopen10g004830' => 'spe', 'Sopen11g009370' => 'spe', 'Sp1g24450' => 'spa', 'Sp1g29670' => 'spa', 'Sp1g39600' => 'spa', 'Sp2g11080' => 'spa', 'Sp2g13970' => 'spa', 'Sp4g16130' => 'spa', 'Sp6g13080' => 'spa', 'Sp7g37270' => 'spa', 'TAR371G0065' => 'tar', 'TAR376G0340' => 'tar', 'TAR376G0435' => 'tar', 'TAR381G0002' => 'tar', 'TAR381G1236' => 'tar', 'TAR624G0055' => 'tar', 'TAR624G0324' => 'tar', 'TAR624G0696' => 'tar', 'TAR624G0906' => 'tar', 'TAR625G0107' => 'tar', 'TAR626G0015' => 'tar', 'TAR626G1356' => 'tar', 'TAR627G0888' => 'tar', 'TAR628G0399' => 'tar', 'TAR628G1327' => 'tar', 'TAR629G2831' => 'tar', 'TAR629G2874' => 'tar', 'TAR633G1432' => 'tar', 'TAR633G2771' => 'tar', 'THA.LOC104803394' => 'tha', 'THA.LOC104805153' => 'tha', 'THA.LOC104806784' => 'tha', 'THA.LOC104810473' => 'tha', 'THA.LOC104813100' => 'tha', 'THA.LOC104814215' => 'tha', 'THA.LOC104815554' => 'tha', 'THA.LOC104820544' => 'tha', 'THA.LOC104824754' => 'tha', 'THA.LOC104827717' => 'tha', 'Thecc.02G031400' => 'tca', 'Thecc.02G055900' => 'tca', 'Thecc.02G350800' => 'tca', 'Thecc.06G150900' => 'tca', 'Thecc.06G186600' => 'tca', 'Thecc.07G089600' => 'tca', 'Thecc.08G020400' => 'tca', 'Thecc.08G182100' => 'tca', 'Thhalv10000873m.g' => 'esa', 'Thhalv10004185m.g' => 'esa', 'Thhalv10006981m.g' => 'esa', 'Thhalv10007204m.g' => 'esa', 'Thhalv10011374m.g' => 'esa', 'Thhalv10013482m.g' => 'esa', 'Thhalv10017801m.g' => 'esa', 'Thhalv10024983m.g' => 'esa', 'TPR.G12072' => 'tpr', 'TPR.G15769' => 'tpr', 'TPR.G16504' => 'tpr', 'TPR.G16506' => 'tpr', 'TPR.G24345' => 'tpr', 'TPR.G26666' => 'tpr', 'TPR.G27320' => 'tpr', 'TPR.G31819' => 'tpr', 'TPR.G38879' => 'tpr', 'TPR.G39015' => 'tpr', 'TPR.G8819' => 'tpr', 'TWI09G0924' => 'twi', 'TWI12G0811' => 'twi', 'TWI12G1294' => 'twi', 'TWI31G0150' => 'twi', 'TWI36G1262' => 'twi', 'TWI38G1287' => 'twi', 'TWI38G1633' => 'twi', 'TWI38G1982' => 'twi', 'TWI39G0116' => 'twi', 'TWI60G1011' => 'twi', 'TWI63G0171' => 'twi', 'TWI73G0839' => 'twi', 'TWI79G1511' => 'twi', 'unitig_0.g915' => 'ugi', 'unitig_0.g916' => 'ugi', 'unitig_21.g20219' => 'ugi', 'unitig_21.g20416' => 'ugi', 'unitig_578.g16132' => 'ugi', 'unitig_578.g16718' => 'ugi', 'unitig_62.g23481' => 'ugi', 'unitig_744.g24535' => 'ugi', 'unitig_749.g13525' => 'ugi', 'vmacro01248' => 'vma', 'vmacro02290' => 'vma', 'vmacro10946' => 'vma', 'vmacro11865' => 'vma', 'vmacro12493' => 'vma', 'vmacro17322' => 'vma', 'vmacro21599' => 'vma', 'vmacro23041' => 'vma', 'VMungo0251G0004' => 'vmu', 'VMungo0251G2639' => 'vmu', 'VMungo0251G2967' => 'vmu', 'VMungo0540G0864' => 'vmu', 'VMungo0540G1569' => 'vmu', 'VMungo0647G0317' => 'vmu', 'VMungo0720G1373' => 'vmu', 'VMungo0720G1508' => 'vmu', 'VMungo1080G0485' => 'vmu', 'VMungo1215G3177' => 'vmu', 'Zm00001eb112600' => 'zma', 'Zm00001eb120220' => 'zma', 'Zm00001eb153240' => 'zma', 'Zm00001eb168880' => 'zma', 'Zm00001eb213920' => 'zma', 'Zm00001eb228280' => 'zma', 'Zm00001eb254580' => 'zma', 'Zm00001eb272180' => 'zma', 'Zm00001eb293190' => 'zma', 'Zm00001eb322930' => 'zma', 'Zm00001eb353360' => 'zma', 'Zm00001eb353390' => 'zma', 'Zm00001eb353430' => 'zma', 'Zm00001eb353440' => 'zma', 'Zm00001eb353780' => 'zma' ) $gf_id = 'HOM05D000499' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000499' ) $data_identifier = 'HOM05D000499' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 29, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 12, 'amhyb' => (int) 8, 'aly' => (int) 12, 'aox' => (int) 9, 'arhy' => (int) 26, 'ath' => (int) 8, 'atr' => (int) 7, 'acertr' => (int) 10, 'cqu' => (int) 15, 'bca' => (int) 29, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 11, 'cansat' => (int) 8, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 9, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 8, 'cpa' => (int) 10, 'csa' => (int) 7, 'camsi' => (int) 20, 'dca' => (int) 8, 'din' => (int) 12, 'dzi' => (int) 14, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 6, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 38, 'gra' => (int) 16, 'vvi' => (int) 8, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 5, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 11, 'lja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 11, 'mpo' => (int) 3, 'mbi' => (int) 14, 'mdo' => (int) 14, 'mtr' => (int) 8, 'cme' => (int) 9, 'egut' => (int) 9, 'ama' => (int) 11, 'nta' => (int) 17, 'nnu' => (int) 11, 'oeu' => (int) 18, 'osa' => (int) 8, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 6, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 9, 'rsi' => (int) 9, 'sbr' => (int) 10, 'sbo' => (int) 8, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 10, 'sas' => (int) 10, 'shi' => (int) 6, 'smo' => (int) 7, 'sly' => (int) 14, 'spe' => (int) 10, 'spa' => (int) 8, 'tar' => (int) 19, 'tha' => (int) 10, 'tca' => (int) 8, 'esa' => (int) 8, 'tpr' => (int) 11, 'twi' => (int) 13, 'ugi' => (int) 9, 'vma' => (int) 8, 'vmu' => (int) 10, 'zma' => (int) 15 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb353780' $species_info = array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ) $local_species = 'amhyb' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000499', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1066', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p29780' => 'bna', 'A02p33180' => 'bna', 'A03p16470' => 'bna', 'A03p66010' => 'bna', 'A04p25970' => 'bna', 'A06p01270' => 'bna', 'A06p46080' => 'bna', 'A07p11400' => 'bna', 'A08p01840' => 'bna', 'A08p08230' => 'bna', 'A08p25740' => 'bna', 'A09p32070' => 'bna', 'A09p37830' => 'bna', 'A09p42840' => 'bna', 'A09p42850' => 'bna', 'Aa31LG10G2060' => 'aar', 'Aa31LG2G7410' => 'aar', 'Aa31LG6G10200' => 'aar', 'Aa31LG6G16680' => 'aar', 'Aa31LG6G8470' => 'aar', 'Aa31LG9G12730' => 'aar', 'Aa31LG9G13680' => 'aar', 'Aa31LG9G14920' => 'aar', 'Aa31LG9G6650' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4977' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5467' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3254' => 'aag', 'Actinidia02578' => 'ach', 'Actinidia07693' => 'ach', 'Actinidia08413' => 'ach', 'Actinidia08414' => 'ach', 'Actinidia15289' => 'ach', 'Actinidia19871' => 'ach', 'Actinidia21475' => 'ach', 'Actinidia22576' => 'ach', 'Actinidia28327' => 'ach', 'Actinidia32491' => 'ach', 'Actinidia39463' => 'ach', 'Actinidia39571' => 'ach', 'Ah.01g013750' => 'amhyb', 'Ah.01g023210' => 'amhyb', 'Ah.04g164850' => 'amhyb', 'Ah.05g178060' => 'amhyb', 'Ah.07g204270' => 'amhyb', 'Ah.07g208480' => 'amhyb', 'Ah.09g237410' => 'amhyb', 'Ah.14g089460' => 'amhyb', 'AL1G41790' => 'aly', 'AL1G49050' => 'aly', 'AL1G53810' => 'aly', 'AL1G61400' => 'aly', 'AL4G18580' => 'aly', 'AL5G12510' => 'aly', 'AL5G12540' => 'aly', 'AL6G43230' => 'aly', 'AL7G10370' => 'aly', 'AL7G19250' => 'aly', 'AL8G12240' => 'aly', 'AL8G18540' => 'aly', 'Aqoxy1G02409' => 'aox', 'Aqoxy2G03993' => 'aox', 'Aqoxy3G03357' => 'aox', 'Aqoxy4G00785' => 'aox', 'Aqoxy5G02598' => 'aox', 'Aqoxy6G00132' => 'aox', 'Aqoxy7G01776' => 'aox', 'Aqoxy7G02316' => 'aox', 'Aqoxy7G03973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.12AFKW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B8730' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27IQR1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3F75VG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3RE0GA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41TCQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.527VTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FIR39' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5W8UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DA38EV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ63HS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H1I32C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HC27T5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4M8AP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7N3CZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9UVDZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LS1NQA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT1D4B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SKC4TM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCFV76' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF9Q1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQWD9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1ZM88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WE07RT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YCK7VH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJE6Q6' => 'arhy', 'AT1G28240' => 'ath', 'AT1G34550' => 'ath', 'AT1G53040' => 'ath', 'AT2G02910' => 'ath', 'AT4G09630' => 'ath', 'AT4G38500' => 'ath', 'AT5G42660' => 'ath', 'AT5G46220' => 'ath', 'ATR0152G026' => 'atr', 'ATR0564G343' => 'atr', 'ATR0706G151' => 'atr', 'ATR0733G207' => 'atr', 'ATR0751G234' => 'atr', 'ATR0807G048' => 'atr', 'ATR1091G084' => 'atr', 'Atru.chr10.1229' => 'acertr', 'Atru.chr10.1230' => 'acertr', 'Atru.chr10.1874' => 'acertr', 'Atru.chr11.1808' => 'acertr', 'Atru.chr13.1795' => 'acertr', 'Atru.chr13.570' => 'acertr', 'Atru.chr2.2608' => 'acertr', 'Atru.chr2.2609' => 'acertr', 'Atru.chr5.3428' => 'acertr', 'Atru.chr8.1171' => 'acertr', 'AUR62004651' => 'cqu', 'AUR62008675' => 'cqu', 'AUR62010014' => 'cqu', 'AUR62013004' => 'cqu', 'AUR62014825' => 'cqu', 'AUR62015015' => 'cqu', 'AUR62015151' => 'cqu', 'AUR62017020' => 'cqu', 'AUR62019422' => 'cqu', 'AUR62023570' => 'cqu', 'AUR62025571' => 'cqu', 'AUR62029098' => 'cqu', 'AUR62033863' => 'cqu', 'AUR62034296' => 'cqu', 'AUR62040075' => 'cqu', 'BcaB02g07334' => 'bca', 'BcaB02g10575' => 'bca', 'BcaB03g12119' => 'bca', 'BcaB03g12120' => 'bca', 'BcaB03g13945' => 'bca', 'BcaB04g17123' => 'bca', 'BcaB04g17867' => 'bca', 'BcaB04g19839' => 'bca', 'BcaB07g30317' => 'bca', 'BcaB07g32432' => 'bca', 'BcaB07g33362' => 'bca', 'BcaB08g36611' => 'bca', 'BcaC01g00028' => 'bca', 'BcaC01g01356' => 'bca', 'BcaC01g02034' => 'bca', 'BcaC01g06051' => 'bca', 'BcaC03g16839' => 'bca', 'BcaC03g17176' => 'bca', 'BcaC05g26829' => 'bca', 'BcaC06g31490' => 'bca', 'BcaC06g35344' => 'bca', 'BcaC06g36570' => 'bca', 'BcaC07g37537' => 'bca', 'BcaC08g43491' => 'bca', 'BcaC08g43773' => 'bca', 'BcaNung00234' => 'bca', 'BcaNung01982' => 'bca', 'BcaNung03707' => 'bca', 'BcaNung06454' => 'bca', 'BolC2t10762H' => 'bol', 'BolC2t11191H' => 'bol', 'BolC3t14322H' => 'bol', 'BolC3t19747H' => 'bol', 'BolC3t21425H' => 'bol', 'BolC4t27800H' => 'bol', 'BolC5t31423H' => 'bol', 'BolC6t35951H' => 'bol', 'BolC6t36282H' => 'bol', 'BolC7t40678H' => 'bol', 'BolC7t40679H' => 'bol', 'BolC7t42222H' => 'bol', 'BolC7t43492H' => 'bol', 'BolC7t46785H' => 'bol', 'BolC8t47853H' => 'bol', 'BolC9t56805H' => 'bol', 'BraA02t08000Z' => 'bra', 'BraA02t08341Z' => 'bra', 'BraA03t10936Z' => 'bra', 'BraA03t15657Z' => 'bra', 'BraA04t18100Z' => 'bra', 'BraA05t20523Z' => 'bra', 'BraA06t23353Z' => 'bra', 'BraA06t27473Z' => 'bra', 'BraA06t27769Z' => 'bra', 'BraA07t28928Z' => 'bra', 'BraA08t32236Z' => 'bra', 'BraA08t32841Z' => 'bra', 'BraA08t34524Z' => 'bra', 'BraA09t38742Z' => 'bra', 'BraA09t39295Z' => 'bra', 'C02p47180' => 'bna', 'C02p50990' => 'bna', 'C03p19360' => 'bna', 'C03p74950' => 'bna', 'C03p91000' => 'bna', 'C04p63260' => 'bna', 'C05p27050' => 'bna', 'C06p08750' => 'bna', 'C06p11490' => 'bna', 'C07p02820' => 'bna', 'C07p17180' => 'bna', 'C07p29440' => 'bna', 'C07p63730' => 'bna', 'C09p39260' => 'bna', 'CAN.G1164.34' => 'can', 'CAN.G1164.39' => 'can', 'CAN.G1530.3' => 'can', 'CAN.G162.61' => 'can', 'CAN.G176.6' => 'can', 'CAN.G289.49' => 'can', 'CAN.G370.21' => 'can', 'CAN.G370.22' => 'can', 'CAN.G371.117' => 'can', 'CAN.G58.37' => 'can', 'CAN.G588.98' => 'can', 'CANSAT21G2266' => 'cansat', 'CANSAT25G2799' => 'cansat', 'CANSAT35G0862' => 'cansat', 'CANSAT35G1704' => 'cansat', 'CANSAT35G1760' => 'cansat', 'CANSAT56G3971' => 'cansat', 'CANSAT56G4116' => 'cansat', 'CANSAT80G1259' => 'cansat', 'CARHR027730' => 'chi', 'CARHR033880' => 'chi', 'CARHR043270' => 'chi', 'CARHR145330' => 'chi', 'CARHR145340' => 'chi', 'CARHR175570' => 'chi', 'CARHR181570' => 'chi', 'CARHR258470' => 'chi', 'CARHR260490' => 'chi', 'CARHR294220' => 'chi', 'Carub.0001s2668' => 'cru', 'Carub.0001s3257' => 'cru', 'Carub.0001s4220' => 'cru', 'Carub.0005s0179' => 'cru', 'Carub.0006s2807' => 'cru', 'Carub.0007s0039' => 'cru', 'Carub.0008s0169' => 'cru', 'Carub.0008s0636' => 'cru', 'Ca_00338_v3' => 'car', 'Ca_00542_v3' => 'car', 'Ca_01844_v3' => 'car', 'Ca_10611_v3' => 'car', 'Ca_13326_v3' => 'car', 'Ca_17944_v3' => 'car', 'Ca_18546_v3' => 'car', 'Ca_24219_v3' => 'car', 'Ca_29972_v3' => 'car', 'CBR_g3681' => 'cbr', 'CBR_g40021' => 'cbr', 'Cc01_g08140' => 'ccan', 'Cc02_g13410' => 'ccan', 'Cc02_g37480' => 'ccan', 'Cc05_g12030' => 'ccan', 'Cc09_g03370' => 'ccan', 'Cc09_g10300' => 'ccan', 'Cc10_g03530' => 'ccan', 'Cc10_g11380' => 'ccan', 'CDE01G0176' => 'cde', 'CDE02G0675' => 'cde', 'CDE02G0942' => 'cde', 'CDE02G1153' => 'cde', 'CDE02G4177' => 'cde', 'CDE04G2117' => 'cde', 'CDE04G2736' => 'cde', 'CDE08G1161' => 'cde', 'CDE09G1238' => 'cde', 'Cfa000467' => 'cfa', 'Cfa000947' => 'cfa', 'Cfa004969' => 'cfa', 'Cfa005284' => 'cfa', 'Cfa008993' => 'cfa', 'Cfa018187' => 'cfa', 'Cfa018454' => 'cfa', 'Cfa020585' => 'cfa', 'Ciclev10000424m.g' => 'ccl', 'Ciclev10003605m.g' => 'ccl', 'Ciclev10007828m.g' => 'ccl', 'Ciclev10014620m.g' => 'ccl', 'Ciclev10015169m.g' => 'ccl', 'Ciclev10018291m.g' => 'ccl', 'Ciclev10028256m.g' => 'ccl', 'Ciclev10033822m.g' => 'ccl', 'CiPaw.05G060300' => 'cil', 'CiPaw.05G085000' => 'cil', 'CiPaw.06G083700' => 'cil', 'CiPaw.06G120300' => 'cil', 'CiPaw.09G060500' => 'cil', 'CiPaw.09G123800' => 'cil', 'CiPaw.11G169700' => 'cil', 'CiPaw.12G118300' => 'cil', 'CiPaw.15G071000' => 'cil', 'CiPaw.15G081900' => 'cil', 'ClCG01G024610' => 'cla', 'ClCG03G006070' => 'cla', 'ClCG05G019250' => 'cla', 'ClCG09G009500' => 'cla', 'ClCG11G008200' => 'cla', 'ClCG11G018080' => 'cla', 'COL.COLO4_17373' => 'col', 'COL.COLO4_22994' => 'col', 'COL.COLO4_26389' => 'col', 'COL.COLO4_27170' => 'col', 'COL.COLO4_31074' => 'col', 'COL.COLO4_31465' => 'col', 'COL.COLO4_36438' => 'col', 'COL.COLO4_36439' => 'col', 'Cpa.g.c38781' => 'cpa', 'Cpa.g.sc128.12' => 'cpa', 'Cpa.g.sc166.7' => 'cpa', 'Cpa.g.sc166.8' => 'cpa', 'Cpa.g.sc20.111' => 'cpa', 'Cpa.g.sc27.31' => 'cpa', 'Cpa.g.sc64.36' => 'cpa', 'Cpa.g.sc64.37' => 'cpa', 'Cpa.g.sc66.49' => 'cpa', 'Cpa.g.sc80.64' => 'cpa', 'CsaV3_1G012320' => 'csa', 'CsaV3_2G008480' => 'csa', 'CsaV3_2G033450' => 'csa', 'CsaV3_3G044830' => 'csa', 'CsaV3_4G033710' => 'csa', 'CsaV3_6G051730' => 'csa', 'CsaV3_7G025350' => 'csa', 'CSS0001067' => 'camsi', 'CSS0005996' => 'camsi', 'CSS0006590' => 'camsi', 'CSS0009673' => 'camsi', 'CSS0010201' => 'camsi', 'CSS0010549' => 'camsi', 'CSS0011364' => 'camsi', 'CSS0014473' => 'camsi', 'CSS0014961' => 'camsi', 'CSS0020191' => 'camsi', 'CSS0021165' => 'camsi', 'CSS0022306' => 'camsi', 'CSS0030591' => 'camsi', 'CSS0030696' => 'camsi', 'CSS0032653' => 'camsi', 'CSS0037487' => 'camsi', 'CSS0041102' => 'camsi', 'CSS0041261' => 'camsi', 'CSS0046246' => 'camsi', 'CSS0049256' => 'camsi', 'DCAR_004075' => 'dca', 'DCAR_011538' => 'dca', 'DCAR_019553' => 'dca', 'DCAR_020952' => 'dca', 'DCAR_021739' => 'dca', 'DCAR_027407' => 'dca', 'DCAR_027913' => 'dca', 'DCAR_028066' => 'dca', 'Dinv05899' => 'din', 'Dinv07563' => 'din', 'Dinv08010' => 'din', 'Dinv14125' => 'din', 'Dinv20172' => 'din', 'Dinv30743' => 'din', 'Dinv31229' => 'din', 'Dinv34162' => 'din', 'Dinv36028' => 'din', 'Dinv39368' => 'din', 'Dinv40565' => 'din', 'Dinv41706' => 'din', 'Duzib052G0089' => 'dzi', 'Duzib116G0641' => 'dzi', 'Duzib132G0069' => 'dzi', 'Duzib132G1219' => 'dzi', 'Duzib147G0278' => 'dzi', 'Duzib160G0480' => 'dzi', 'Duzib170G0661' => 'dzi', 'Duzib177G0591' => 'dzi', 'Duzib187G1353' => 'dzi', 'Duzib192G0858' => 'dzi', 'Duzib192G0883' => 'dzi', 'Duzib213G0506' => 'dzi', 'Duzib235G0289' => 'dzi', 'Duzib251G0422' => 'dzi', 'ECA232G3898' => 'eca', 'ECA233G5950' => 'eca', 'ECA234G1699' => 'eca', 'ECA234G2421' => 'eca', 'ECA236G0426' => 'eca', 'ECA236G4331' => 'eca', 'ECA248G2573' => 'eca', 'EL10Ac1g00077' => 'bvu', 'EL10Ac1g01746' => 'bvu', 'EL10Ac2g03464' => 'bvu', 'EL10Ac4g08176' => 'bvu', 'EL10Ac7g17521' => 'bvu', 'EL10Ac8g20386' => 'bvu', 'EL10Ac9g21343' => 'bvu', 'EL10Ac9g22688' => 'bvu', 'Eucgr.B03434' => 'egr', 'Eucgr.D00618' => 'egr', 'Eucgr.E02395' => 'egr', 'Eucgr.F01129' => 'egr', 'Eucgr.F02622' => 'egr', 'Eucgr.F04207' => 'egr', 'FAN01G0570' => 'fan', 'FAN03G3351' => 'fan', 'FAN06G3702' => 'fan', 'FAN07G2149' => 'fan', 'FAN10G3758' => 'fan', 'FAN11G1170' => 'fan', 'FAN11G2050' => 'fan', 'FAN11G2724' => 'fan', 'FAN12G1700' => 'fan', 'FAN12G2028' => 'fan', 'FAN15G1160' => 'fan', 'FAN15G3063' => 'fan', 'FAN16G2540' => 'fan', 'FAN16G3077' => 'fan', 'FAN16G3624' => 'fan', 'FAN17G0221' => 'fan', 'FAN20G2492' => 'fan', 'FAN20G2905' => 'fan', 'FAN21G0548' => 'fan', 'FAN21G1300' => 'fan', 'FAN22G0077' => 'fan', 'FAN22G1315' => 'fan', 'FAN24G1280' => 'fan', 'FAN24G1445' => 'fan', 'FAN24G3527' => 'fan', 'FAN25G0464' => 'fan', 'FAN25G2885' => 'fan', 'FAN25G3270' => 'fan', 'FAN27G1101' => 'fan', 'FAN27G2846' => 'fan', 'FAN27G3524' => 'fan', 'FvH4_2g11770' => 'fve', 'FvH4_2g15630' => 'fve', 'FvH4_3g05570' => 'fve', 'FvH4_3g09110' => 'fve', 'FvH4_3g19940' => 'fve', 'FvH4_4g04821' => 'fve', 'FvH4_4g31480' => 'fve', 'FvH4_7g01740' => 'fve', 'Glyma.05G130400' => 'gma', 'Glyma.05G156400' => 'gma', 'Glyma.07G197000' => 'gma', 'Glyma.08G085151' => 'gma', 'Glyma.08G114500' => 'gma', 'Glyma.08G300400' => 'gma', 'Glyma.10G215800' => 'gma', 'Glyma.12G224400' => 'gma', 'Glyma.13G179300' => 'gma', 'Glyma.13G218151' => 'gma', 'Glyma.13G238800' => 'gma', 'Glyma.13G276900' => 'gma', 'Glyma.14G078200' => 'gma', 'Glyma.15G074500' => 'gma', 'Glyma.15G094100' => 'gma', 'Glyma.17G247200' => 'gma', 'Glyma.18G120100' => 'gma', 'Glyma.20G176000' => 'gma', 'Gohir.A01G063600' => 'ghi', 'Gohir.A01G170301' => 'ghi', 'Gohir.A02G060500' => 'ghi', 'Gohir.A05G133850' => 'ghi', 'Gohir.A05G161400' => 'ghi', 'Gohir.A06G012900' => 'ghi', 'Gohir.A06G035901' => 'ghi', 'Gohir.A06G127100' => 'ghi', 'Gohir.A06G210500' => 'ghi', 'Gohir.A08G008650' => 'ghi', 'Gohir.A09G072700' => 'ghi', 'Gohir.A09G088301' => 'ghi', 'Gohir.A10G040600' => 'ghi', 'Gohir.A12G036300' => 'ghi', 'Gohir.A12G143350' => 'ghi', 'Gohir.A12G165500' => 'ghi', 'Gohir.A13G145700' => 'ghi', 'Gohir.D01G050000' => 'ghi', 'Gohir.D01G051366' => 'ghi', 'Gohir.D01G161350' => 'ghi', 'Gohir.D02G065900' => 'ghi', 'Gohir.D05G164200' => 'ghi', 'Gohir.D05G355500' => 'ghi', 'Gohir.D06G010400' => 'ghi', 'Gohir.D06G111250' => 'ghi', 'Gohir.D06G132000' => 'ghi', 'Gohir.D06G210500' => 'ghi', 'Gohir.D07G165675' => 'ghi', 'Gohir.D08G062240' => 'ghi', 'Gohir.D08G086101' => 'ghi', 'Gohir.D08G138060' => 'ghi', 'Gohir.D09G072300' => 'ghi', 'Gohir.D10G041400' => 'ghi', 'Gohir.D11G191020' => 'ghi', 'Gohir.D11G212066' => 'ghi', 'Gohir.D12G036300' => 'ghi', 'Gohir.D12G168600' => 'ghi', 'Gohir.D13G150600' => 'ghi', 'Gorai.001G057300' => 'gra', 'Gorai.002G069900' => 'gra', 'Gorai.002G200000' => 'gra', 'Gorai.003G067600' => 'gra', 'Gorai.005G074800' => 'gra', 'Gorai.006G087300' => 'gra', 'Gorai.008G037500' => 'gra', 'Gorai.008G181400' => 'gra', 'Gorai.009G169400' => 'gra', 'Gorai.009G387900' => 'gra', 'Gorai.010G013300' => 'gra', 'Gorai.010G153800' => 'gra', 'Gorai.010G255800' => 'gra', 'Gorai.011G043700' => 'gra', 'Gorai.011G198900' => 'gra', 'Gorai.013G168400' => 'gra', 'GSVIVG01005212001' => 'vvi', 'GSVIVG01006163001' => 'vvi', 'GSVIVG01009625001' => 'vvi', 'GSVIVG01014338001' => 'vvi', 'GSVIVG01020005001' => 'vvi', 'GSVIVG01021450001' => 'vvi', 'GSVIVG01023975001' => 'vvi', 'GSVIVG01034490001' => 'vvi', 'HanXRQChr04g0112071' => 'han', 'HanXRQChr05g0131151' => 'han', 'HanXRQChr09g0262371' => 'han', 'HanXRQChr09g0268401' => 'han', 'HanXRQChr10g0279241' => 'han', 'HanXRQChr10g0297961' => 'han', 'HanXRQChr11g0326231' => 'han', 'HanXRQChr11g0328471' => 'han', 'HanXRQChr16g0507941' => 'han', 'HanXRQChr17g0560211' => 'han', 'Haze_02108' => 'cav', 'Haze_02428' => 'cav', 'Haze_05593' => 'cav', 'Haze_06448' => 'cav', 'Haze_09427' => 'cav', 'Haze_12022' => 'cav', 'Haze_17612' => 'cav', 'Haze_17928' => 'cav', 'Hma1.2p1_0032F.1_g019250' => 'hma', 'Hma1.2p1_0163F.1_g072690' => 'hma', 'Hma1.2p1_0265F.1_g106710' => 'hma', 'Hma1.2p1_0286F.1_g113970' => 'hma', 'Hma1.2p1_0363F.1_g136640' => 'hma', 'Hma1.2p1_0584F.1_g183470' => 'hma', 'Hma1.2p1_0885F.1_g232570' => 'hma', 'HPP92_006022' => 'vpl', 'HPP92_007320' => 'vpl', 'HPP92_011521' => 'vpl', 'HPP92_019387' => 'vpl', 'HPP92_024038' => 'vpl', 'Hund05891' => 'sun', 'Hund06450' => 'sun', 'Hund12053' => 'sun', 'Hund16800' => 'sun', 'Hund21222' => 'sun', 'Hund22896' => 'sun', 'Hund23746' => 'sun', 'Hund27083' => 'sun', 'Lalb_Chr02g0141831' => 'lal', 'Lalb_Chr02g0141841' => 'lal', 'Lalb_Chr05g0220411' => 'lal', 'Lalb_Chr06g0162081' => 'lal', 'Lalb_Chr09g0327651' => 'lal', 'Lalb_Chr13g0295051' => 'lal', 'Lalb_Chr15g0086801' => 'lal', 'Lalb_Chr16g0383781' => 'lal', 'Lalb_Chr16g0383791' => 'lal', 'Lalb_Chr18g0055441' => 'lal', 'Lalb_Chr18g0059611' => 'lal', 'Lalb_Chr20g0109661' => 'lal', 'Lalb_Chr20g0109831' => 'lal', 'Lalb_Chr20g0121871' => 'lal', 'Lalb_Chr22g0355361' => 'lal', 'Lalb_Chr25g0286371' => 'lal', 'Lj1A1187G43' => 'lonja', 'Lj1A1205T50' => 'lonja', 'Lj1A800G33' => 'lonja', 'Lj1C1187T7' => 'lonja', 'Lj1C843T11' => 'lonja', 'Lj1g0010940' => 'lja', 'Lj2A288T69' => 'lonja', 'Lj3g0024276' => 'lja', 'Lj4A47T76' => 'lonja', 'Lj4g0005805' => 'lja', 'Lj4g0006097' => 'lja', 'Lj4g0008528' => 'lja', 'Lj4g0024907' => 'lja', 'Lj5g0012472' => 'lja', 'Lj5g0018648' => 'lja', 'Lj6C789G1' => 'lonja', 'Lj6g0004000' => 'lja', 'Lj7A292G67' => 'lonja', 'Lj7A292T64' => 'lonja', 'Lj9A400T58' => 'lonja', 'Lsat_1_v5_gn_1_126181' => 'lsa', 'Lsat_1_v5_gn_4_123041' => 'lsa', 'Lsat_1_v5_gn_4_133620' => 'lsa', 'Lsat_1_v5_gn_4_53221' => 'lsa', 'Lsat_1_v5_gn_4_71961' => 'lsa', 'Lsat_1_v5_gn_7_105241' => 'lsa', 'Lsat_1_v5_gn_7_21361' => 'lsa', 'Lsat_1_v5_gn_7_28860' => 'lsa', 'Lsat_1_v5_gn_7_31260' => 'lsa', 'Lsat_1_v5_gn_8_52801' => 'lsa', 'Manes.02G191400' => 'mes', 'Manes.03G110100' => 'mes', 'Manes.04G071100' => 'mes', 'Manes.05G100500' => 'mes', 'Manes.05G164700' => 'mes', 'Manes.15G087000' => 'mes', 'Manes.15G121500' => 'mes', 'Manes.16G028300' => 'mes', 'Manes.17G046100' => 'mes', 'Manes.17G069800' => 'mes', 'Manes.18G100500' => 'mes', 'Mapoly0002s0109' => 'mpo', 'Mapoly0024s0007' => 'mpo', 'Mapoly0089s0032' => 'mpo', 'MBI04_g42241_MAGBIO' => 'mbi', 'MBI05_g11988_MAGBIO' => 'mbi', 'MBI05_g35452_MAGBIO' => 'mbi', 'MBI07_g30179_MAGBIO' => 'mbi', 'MBI07_g35859_MAGBIO' => 'mbi', 'MBI07_g35860_MAGBIO' => 'mbi', 'MBI07_g37166_MAGBIO' => 'mbi', 'MBI08_g18172_MAGBIO' => 'mbi', 'MBI09_g08441_MAGBIO' => 'mbi', 'MBI13_g01676_MAGBIO' => 'mbi', 'MBI14_g42955_MAGBIO' => 'mbi', 'MBI16_g13161_MAGBIO' => 'mbi', 'MBI17_g27204_MAGBIO' => 'mbi', 'MBI19_g21595_MAGBIO' => 'mbi', 'MD00G1148400' => 'mdo', 'MD02G1301200' => 'mdo', 'MD03G1227800' => 'mdo', 'MD05G1041100' => 'mdo', 'MD05G1124800' => 'mdo', 'MD05G1284000' => 'mdo', 'MD05G1338800' => 'mdo', 'MD05G1338900' => 'mdo', 'MD07G1022800' => 'mdo', 'MD10G1047500' => 'mdo', 'MD10G1127500' => 'mdo', 'MD10G1262300' => 'mdo', 'MD10G1293800' => 'mdo', 'MD16G1074300' => 'mdo', 'Medtr1g021670' => 'mtr', 'Medtr1g096320' => 'mtr', 'Medtr2g013690' => 'mtr', 'Medtr2g019450' => 'mtr', 'Medtr2g085170' => 'mtr', 'Medtr4g088785' => 'mtr', 'Medtr8g055930' => 'mtr', 'Medtr8g085850' => 'mtr', 'MELO3C002605.2' => 'cme', 'MELO3C003891.2' => 'cme', 'MELO3C004012.2' => 'cme', 'MELO3C007134.2' => 'cme', 'MELO3C008118.2' => 'cme', 'MELO3C016700.2' => 'cme', 'MELO3C024127.2' => 'cme', 'MELO3C033361.2' => 'cme', 'MELO3C033362.2' => 'cme', 'Migut.C00430' => 'egut', 'Migut.C01246' => 'egut', 'Migut.E00101' => 'egut', 'Migut.H01486' => 'egut', 'Migut.H01939' => 'egut', 'Migut.K00360' => 'egut', 'Migut.M00910' => 'egut', 'Migut.M01139' => 'egut', 'Migut.N02677' => 'egut', 'MSTRG.13252' => 'ama', 'MSTRG.14701' => 'ama', 'MSTRG.1521' => 'ama', 'MSTRG.15884' => 'ama', 'MSTRG.16242' => 'ama', 'MSTRG.22285' => 'ama', 'MSTRG.22444' => 'ama', 'MSTRG.2349' => 'ama', 'MSTRG.26308' => 'ama', 'MSTRG.28296' => 'ama', 'MSTRG.9895' => 'ama', 'Nitab4.5_0000110g0060' => 'nta', 'Nitab4.5_0000420g0130' => 'nta', 'Nitab4.5_0000422g0030' => 'nta', 'Nitab4.5_0000560g0180' => 'nta', 'Nitab4.5_0000703g0100' => 'nta', 'Nitab4.5_0000786g0200' => 'nta', 'Nitab4.5_0001336g0020' => 'nta', 'Nitab4.5_0001796g0030' => 'nta', 'Nitab4.5_0003348g0060' => 'nta', 'Nitab4.5_0003698g0040' => 'nta', 'Nitab4.5_0003942g0090' => 'nta', 'Nitab4.5_0004775g0070' => 'nta', 'Nitab4.5_0004864g0030' => 'nta', 'Nitab4.5_0005615g0020' => 'nta', 'Nitab4.5_0009288g0030' => 'nta', 'Nitab4.5_0009341g0010' => 'nta', 'Nitab4.5_0009535g0010' => 'nta', 'Nn1g03995' => 'nnu', 'Nn1g04100' => 'nnu', 'Nn1g06530' => 'nnu', 'Nn3g16404' => 'nnu', 'Nn3g17212' => 'nnu', 'Nn3g20776' => 'nnu', 'Nn3g21923' => 'nnu', 'Nn5g27737' => 'nnu', 'Nn5g29461' => 'nnu', 'Nn7g38355' => 'nnu', 'Nn8g39873' => 'nnu', 'Oeu000548.2' => 'oeu', 'Oeu004672.1' => 'oeu', 'Oeu015605.2' => 'oeu', 'Oeu016092.1' => 'oeu', 'Oeu017879.3' => 'oeu', 'Oeu024910.1' => 'oeu', 'Oeu028965.1' => 'oeu', 'Oeu031269.1' => 'oeu', 'Oeu031270.1' => 'oeu', 'Oeu032535.1' => 'oeu', 'Oeu034151.1' => 'oeu', 'Oeu034152.1' => 'oeu', 'Oeu034588.2' => 'oeu', 'Oeu050846.1' => 'oeu', 'Oeu050849.2' => 'oeu', 'Oeu051063.2' => 'oeu', 'Oeu052368.1' => 'oeu', 'Oeu052370.1' => 'oeu', 'Os01g0210400' => 'osa', 'Os01g0304300' => 'osa', 'Os01g0749100' => 'osa', 'Os02g0745800' => 'osa', 'Os03g0769050' => 'osa', 'Os05g0531500' => 'osa', 'Os06g0724300' => 'osa', 'Os11g0198100' => 'osa', 'Peaxi162Scf00069g01425' => 'pax', 'Peaxi162Scf00280g00811' => 'pax', 'Peaxi162Scf00310g00615' => 'pax', 'Peaxi162Scf00362g00542' => 'pax', 'Peaxi162Scf00461g00310' => 'pax', 'Peaxi162Scf00530g00118' => 'pax', 'Peaxi162Scf00541g00057' => 'pax', 'Peaxi162Scf00661g00017' => 'pax', 'Peaxi162Scf00926g00027' => 'pax', 'Peaxi162Scf01064g00263' => 'pax', 'Peaxi162Scf01211g00135' => 'pax', 'PGR004G2336' => 'pgr', 'PGR042G0327' => 'pgr', 'PGR042G1957' => 'pgr', 'PGR042G2003' => 'pgr', 'PGR042G3929' => 'pgr', 'PGR083G1137' => 'pgr', 'PGR083G1364' => 'pgr', 'PGSC0003DMG400003381' => 'stu', 'PGSC0003DMG400003417' => 'stu', 'PGSC0003DMG400008981' => 'stu', 'PGSC0003DMG400012417' => 'stu', 'PGSC0003DMG400012823' => 'stu', 'PGSC0003DMG400016885' => 'stu', 'PGSC0003DMG400022812' => 'stu', 'PGSC0003DMG400029726' => 'stu', 'PGSC0003DMG401009243' => 'stu', 'PGSC0003DMG401031505' => 'stu', 'PGSC0003DMG402031505' => 'stu', 'Phvul.001G017600' => 'pvu', 'Phvul.002G193500' => 'pvu', 'Phvul.002G228900' => 'pvu', 'Phvul.002G236800' => 'pvu', 'Phvul.003G049500' => 'pvu', 'Phvul.005G072000' => 'pvu', 'Phvul.006G164800' => 'pvu', 'Phvul.006G185100' => 'pvu', 'Phvul.007G090000' => 'pvu', 'Potri.001G399800' => 'ptr', 'Potri.002G149900' => 'ptr', 'Potri.004G044100' => 'ptr', 'Potri.004G177600' => 'ptr', 'Potri.009G138000' => 'ptr', 'Potri.010G094000' => 'ptr', 'Potri.011G053000' => 'ptr', 'Potri.011G119300' => 'ptr', 'Potri.013G113700' => 'ptr', 'Potri.018G107800' => 'ptr', 'Potri.019G084100' => 'ptr', 'Pp3c14_23720' => 'ppa', 'Pp3c16_6340' => 'ppa', 'Pp3c23_13420' => 'ppa', 'Pp3c24_2740' => 'ppa', 'Pp3c25_860' => 'ppa', 'Pp3c8_21750' => 'ppa', 'Prupe.1G273000' => 'ppe', 'Prupe.1G273700' => 'ppe', 'Prupe.1G274100' => 'ppe', 'Prupe.2G023300' => 'ppe', 'Prupe.4G048000' => 'ppe', 'Prupe.4G080400' => 'ppe', 'Prupe.4G181200' => 'ppe', 'Prupe.8G056900' => 'ppe', 'Prupe.8G168700' => 'ppe', 'Psat1g189080' => 'psa', 'Psat1g204760' => 'psa', 'Psat4g175560' => 'psa', 'Psat4g177720' => 'psa', 'Psat5g244240' => 'psa', 'Psat6g010720' => 'psa', 'Psat6g187200' => 'psa', 'Psat7g072040' => 'psa', 'PSO017G3501' => 'pso', 'PSO063G2148' => 'pso', 'PSO063G5608' => 'pso', 'PSO210G6392' => 'pso', 'PSO541G2319' => 'pso', 'PSO541G2836' => 'pso', 'PSO541G4012' => 'pso', 'PSO541G6253' => 'pso', 'PSO675G0580' => 'pso', 'PSO675G0856' => 'pso', 'PSO675G5635' => 'pso', 'PSO675G9157' => 'pso', 'PSO832G1660' => 'pso', 'PSO832G1969' => 'pso', 'QL02p007186' => 'qlo', 'QL02p033904' => 'qlo', 'QL03p064391' => 'qlo', 'QL05p040593' => 'qlo', 'QL05p058242' => 'qlo', 'QL08p021825' => 'qlo', 'QL11p004981' => 'qlo', 'RcHm_v2.0_Chr1g0318301' => 'rch', 'RcHm_v2.0_Chr4g0418501' => 'rch', 'RcHm_v2.0_Chr4g0439971' => 'rch', 'RcHm_v2.0_Chr5g0008541' => 'rch', 'RcHm_v2.0_Chr5g0014101' => 'rch', 'RcHm_v2.0_Chr5g0014131' => 'rch', 'RcHm_v2.0_Chr5g0033621' => 'rch', 'RcHm_v2.0_Chr6g0272041' => 'rch', 'RcHm_v2.0_Chr6g0278831' => 'rch', 'Rhsim02G0130400' => 'rsi', 'Rhsim02G0171100' => 'rsi', 'Rhsim05G0053000' => 'rsi', 'Rhsim05G0053100' => 'rsi', 'Rhsim06G0096500' => 'rsi', 'Rhsim06G0096600' => 'rsi', 'Rhsim06G0199100' => 'rsi', 'Rhsim12G0062300' => 'rsi', 'Rhsim12G0062800' => 'rsi', 'Sabra02G0118600' => 'sbr', 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'Solyc03g079860.2' => 'sly', 'Solyc04g079770.3' => 'sly', 'Solyc05g007430.4' => 'sly', 'Solyc07g063150.3' => 'sly', 'Solyc08g016620.3' => 'sly', 'Solyc09g057590.3' => 'sly', 'Solyc09g057600.1' => 'sly', 'Solyc10g009050.3' => 'sly', 'Solyc11g017420.2' => 'sly', 'Sopen01g053810' => 'spe', 'Sopen02g023040' => 'spe', 'Sopen03g002440' => 'spe', 'Sopen04g033350' => 'spe', 'Sopen05g003310' => 'spe', 'Sopen07g004050' => 'spe', 'Sopen07g031340' => 'spe', 'Sopen08g006990' => 'spe', 'Sopen10g004830' => 'spe', 'Sopen11g009370' => 'spe', 'Sp1g24450' => 'spa', 'Sp1g29670' => 'spa', 'Sp1g39600' => 'spa', 'Sp2g11080' => 'spa', 'Sp2g13970' => 'spa', 'Sp4g16130' => 'spa', 'Sp6g13080' => 'spa', 'Sp7g37270' => 'spa', 'TAR371G0065' => 'tar', 'TAR376G0340' => 'tar', 'TAR376G0435' => 'tar', 'TAR381G0002' => 'tar', 'TAR381G1236' => 'tar', 'TAR624G0055' => 'tar', 'TAR624G0324' => 'tar', 'TAR624G0696' => 'tar', 'TAR624G0906' => 'tar', 'TAR625G0107' => 'tar', 'TAR626G0015' => 'tar', 'TAR626G1356' => 'tar', 'TAR627G0888' => 'tar', 'TAR628G0399' => 'tar', 'TAR628G1327' => 'tar', 'TAR629G2831' => 'tar', 'TAR629G2874' => 'tar', 'TAR633G1432' => 'tar', 'TAR633G2771' => 'tar', 'THA.LOC104803394' => 'tha', 'THA.LOC104805153' => 'tha', 'THA.LOC104806784' => 'tha', 'THA.LOC104810473' => 'tha', 'THA.LOC104813100' => 'tha', 'THA.LOC104814215' => 'tha', 'THA.LOC104815554' => 'tha', 'THA.LOC104820544' => 'tha', 'THA.LOC104824754' => 'tha', 'THA.LOC104827717' => 'tha', 'Thecc.02G031400' => 'tca', 'Thecc.02G055900' => 'tca', 'Thecc.02G350800' => 'tca', 'Thecc.06G150900' => 'tca', 'Thecc.06G186600' => 'tca', 'Thecc.07G089600' => 'tca', 'Thecc.08G020400' => 'tca', 'Thecc.08G182100' => 'tca', 'Thhalv10000873m.g' => 'esa', 'Thhalv10004185m.g' => 'esa', 'Thhalv10006981m.g' => 'esa', 'Thhalv10007204m.g' => 'esa', 'Thhalv10011374m.g' => 'esa', 'Thhalv10013482m.g' => 'esa', 'Thhalv10017801m.g' => 'esa', 'Thhalv10024983m.g' => 'esa', 'TPR.G12072' => 'tpr', 'TPR.G15769' => 'tpr', 'TPR.G16504' => 'tpr', 'TPR.G16506' => 'tpr', 'TPR.G24345' => 'tpr', 'TPR.G26666' => 'tpr', 'TPR.G27320' => 'tpr', 'TPR.G31819' => 'tpr', 'TPR.G38879' => 'tpr', 'TPR.G39015' => 'tpr', 'TPR.G8819' => 'tpr', 'TWI09G0924' => 'twi', 'TWI12G0811' => 'twi', 'TWI12G1294' => 'twi', 'TWI31G0150' => 'twi', 'TWI36G1262' => 'twi', 'TWI38G1287' => 'twi', 'TWI38G1633' => 'twi', 'TWI38G1982' => 'twi', 'TWI39G0116' => 'twi', 'TWI60G1011' => 'twi', 'TWI63G0171' => 'twi', 'TWI73G0839' => 'twi', 'TWI79G1511' => 'twi', 'unitig_0.g915' => 'ugi', 'unitig_0.g916' => 'ugi', 'unitig_21.g20219' => 'ugi', 'unitig_21.g20416' => 'ugi', 'unitig_578.g16132' => 'ugi', 'unitig_578.g16718' => 'ugi', 'unitig_62.g23481' => 'ugi', 'unitig_744.g24535' => 'ugi', 'unitig_749.g13525' => 'ugi', 'vmacro01248' => 'vma', 'vmacro02290' => 'vma', 'vmacro10946' => 'vma', 'vmacro11865' => 'vma', 'vmacro12493' => 'vma', 'vmacro17322' => 'vma', 'vmacro21599' => 'vma', 'vmacro23041' => 'vma', 'VMungo0251G0004' => 'vmu', 'VMungo0251G2639' => 'vmu', 'VMungo0251G2967' => 'vmu', 'VMungo0540G0864' => 'vmu', 'VMungo0540G1569' => 'vmu', 'VMungo0647G0317' => 'vmu', 'VMungo0720G1373' => 'vmu', 'VMungo0720G1508' => 'vmu', 'VMungo1080G0485' => 'vmu', 'VMungo1215G3177' => 'vmu', 'Zm00001eb112600' => 'zma', 'Zm00001eb120220' => 'zma', 'Zm00001eb153240' => 'zma', 'Zm00001eb168880' => 'zma', 'Zm00001eb213920' => 'zma', 'Zm00001eb228280' => 'zma', 'Zm00001eb254580' => 'zma', 'Zm00001eb272180' => 'zma', 'Zm00001eb293190' => 'zma', 'Zm00001eb322930' => 'zma', 'Zm00001eb353360' => 'zma', 'Zm00001eb353390' => 'zma', 'Zm00001eb353430' => 'zma', 'Zm00001eb353440' => 'zma', 'Zm00001eb353780' => 'zma' ), 'gf_id' => 'HOM05D000499', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000499' ), 'data_identifier' => 'HOM05D000499', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000499', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1066', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p29780' => 'bna', 'A02p33180' => 'bna', 'A03p16470' => 'bna', 'A03p66010' => 'bna', 'A04p25970' => 'bna', 'A06p01270' => 'bna', 'A06p46080' => 'bna', 'A07p11400' => 'bna', 'A08p01840' => 'bna', 'A08p08230' => 'bna', 'A08p25740' => 'bna', 'A09p32070' => 'bna', 'A09p37830' => 'bna', 'A09p42840' => 'bna', 'A09p42850' => 'bna', 'Aa31LG10G2060' => 'aar', 'Aa31LG2G7410' => 'aar', 'Aa31LG6G10200' => 'aar', 'Aa31LG6G16680' => 'aar', 'Aa31LG6G8470' => 'aar', 'Aa31LG9G12730' => 'aar', 'Aa31LG9G13680' => 'aar', 'Aa31LG9G14920' => 'aar', 'Aa31LG9G6650' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4977' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5467' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3254' => 'aag', 'Actinidia02578' => 'ach', 'Actinidia07693' => 'ach', 'Actinidia08413' => 'ach', 'Actinidia08414' => 'ach', 'Actinidia15289' => 'ach', 'Actinidia19871' => 'ach', 'Actinidia21475' => 'ach', 'Actinidia22576' => 'ach', 'Actinidia28327' => 'ach', 'Actinidia32491' => 'ach', 'Actinidia39463' => 'ach', 'Actinidia39571' => 'ach', 'Ah.01g013750' => 'amhyb', 'Ah.01g023210' => 'amhyb', 'Ah.04g164850' => 'amhyb', 'Ah.05g178060' => 'amhyb', 'Ah.07g204270' => 'amhyb', 'Ah.07g208480' => 'amhyb', 'Ah.09g237410' => 'amhyb', 'Ah.14g089460' => 'amhyb', 'AL1G41790' => 'aly', 'AL1G49050' => 'aly', 'AL1G53810' => 'aly', 'AL1G61400' => 'aly', 'AL4G18580' => 'aly', 'AL5G12510' => 'aly', 'AL5G12540' => 'aly', 'AL6G43230' => 'aly', 'AL7G10370' => 'aly', 'AL7G19250' => 'aly', 'AL8G12240' => 'aly', 'AL8G18540' => 'aly', 'Aqoxy1G02409' => 'aox', 'Aqoxy2G03993' => 'aox', 'Aqoxy3G03357' => 'aox', 'Aqoxy4G00785' => 'aox', 'Aqoxy5G02598' => 'aox', 'Aqoxy6G00132' => 'aox', 'Aqoxy7G01776' => 'aox', 'Aqoxy7G02316' => 'aox', 'Aqoxy7G03973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.12AFKW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B8730' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27IQR1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3F75VG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3RE0GA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41TCQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.527VTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FIR39' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5W8UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DA38EV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ63HS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H1I32C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HC27T5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4M8AP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7N3CZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9UVDZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LS1NQA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT1D4B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SKC4TM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCFV76' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF9Q1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQWD9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1ZM88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WE07RT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YCK7VH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJE6Q6' => 'arhy', 'AT1G28240' => 'ath', 'AT1G34550' => 'ath', 'AT1G53040' => 'ath', 'AT2G02910' => 'ath', 'AT4G09630' => 'ath', 'AT4G38500' => 'ath', 'AT5G42660' => 'ath', 'AT5G46220' => 'ath', 'ATR0152G026' => 'atr', 'ATR0564G343' => 'atr', 'ATR0706G151' => 'atr', 'ATR0733G207' => 'atr', 'ATR0751G234' => 'atr', 'ATR0807G048' => 'atr', 'ATR1091G084' => 'atr', 'Atru.chr10.1229' => 'acertr', 'Atru.chr10.1230' => 'acertr', 'Atru.chr10.1874' => 'acertr', 'Atru.chr11.1808' => 'acertr', 'Atru.chr13.1795' => 'acertr', 'Atru.chr13.570' => 'acertr', 'Atru.chr2.2608' => 'acertr', 'Atru.chr2.2609' => 'acertr', 'Atru.chr5.3428' => 'acertr', 'Atru.chr8.1171' => 'acertr', 'AUR62004651' => 'cqu', 'AUR62008675' => 'cqu', 'AUR62010014' => 'cqu', 'AUR62013004' => 'cqu', 'AUR62014825' => 'cqu', 'AUR62015015' => 'cqu', 'AUR62015151' => 'cqu', 'AUR62017020' => 'cqu', 'AUR62019422' => 'cqu', 'AUR62023570' => 'cqu', 'AUR62025571' => 'cqu', 'AUR62029098' => 'cqu', 'AUR62033863' => 'cqu', 'AUR62034296' => 'cqu', 'AUR62040075' => 'cqu', 'BcaB02g07334' => 'bca', 'BcaB02g10575' => 'bca', 'BcaB03g12119' => 'bca', 'BcaB03g12120' => 'bca', 'BcaB03g13945' => 'bca', 'BcaB04g17123' => 'bca', 'BcaB04g17867' => 'bca', 'BcaB04g19839' => 'bca', 'BcaB07g30317' => 'bca', 'BcaB07g32432' => 'bca', 'BcaB07g33362' => 'bca', 'BcaB08g36611' => 'bca', 'BcaC01g00028' => 'bca', 'BcaC01g01356' => 'bca', 'BcaC01g02034' => 'bca', 'BcaC01g06051' => 'bca', 'BcaC03g16839' => 'bca', 'BcaC03g17176' => 'bca', 'BcaC05g26829' => 'bca', 'BcaC06g31490' => 'bca', 'BcaC06g35344' => 'bca', 'BcaC06g36570' => 'bca', 'BcaC07g37537' => 'bca', 'BcaC08g43491' => 'bca', 'BcaC08g43773' => 'bca', 'BcaNung00234' => 'bca', 'BcaNung01982' => 'bca', 'BcaNung03707' => 'bca', 'BcaNung06454' => 'bca', 'BolC2t10762H' => 'bol', 'BolC2t11191H' => 'bol', 'BolC3t14322H' => 'bol', 'BolC3t19747H' => 'bol', 'BolC3t21425H' => 'bol', 'BolC4t27800H' => 'bol', 'BolC5t31423H' => 'bol', 'BolC6t35951H' => 'bol', 'BolC6t36282H' => 'bol', 'BolC7t40678H' => 'bol', 'BolC7t40679H' => 'bol', 'BolC7t42222H' => 'bol', 'BolC7t43492H' => 'bol', 'BolC7t46785H' => 'bol', 'BolC8t47853H' => 'bol', 'BolC9t56805H' => 'bol', 'BraA02t08000Z' => 'bra', 'BraA02t08341Z' => 'bra', 'BraA03t10936Z' => 'bra', 'BraA03t15657Z' => 'bra', 'BraA04t18100Z' => 'bra', 'BraA05t20523Z' => 'bra', 'BraA06t23353Z' => 'bra', 'BraA06t27473Z' => 'bra', 'BraA06t27769Z' => 'bra', 'BraA07t28928Z' => 'bra', 'BraA08t32236Z' => 'bra', 'BraA08t32841Z' => 'bra', 'BraA08t34524Z' => 'bra', 'BraA09t38742Z' => 'bra', 'BraA09t39295Z' => 'bra', 'C02p47180' => 'bna', 'C02p50990' => 'bna', 'C03p19360' => 'bna', 'C03p74950' => 'bna', 'C03p91000' => 'bna', 'C04p63260' => 'bna', 'C05p27050' => 'bna', 'C06p08750' => 'bna', 'C06p11490' => 'bna', 'C07p02820' => 'bna', 'C07p17180' => 'bna', 'C07p29440' => 'bna', 'C07p63730' => 'bna', 'C09p39260' => 'bna', 'CAN.G1164.34' => 'can', 'CAN.G1164.39' => 'can', 'CAN.G1530.3' => 'can', 'CAN.G162.61' => 'can', 'CAN.G176.6' => 'can', 'CAN.G289.49' => 'can', 'CAN.G370.21' => 'can', 'CAN.G370.22' => 'can', 'CAN.G371.117' => 'can', 'CAN.G58.37' => 'can', 'CAN.G588.98' => 'can', 'CANSAT21G2266' => 'cansat', 'CANSAT25G2799' => 'cansat', 'CANSAT35G0862' => 'cansat', 'CANSAT35G1704' => 'cansat', 'CANSAT35G1760' => 'cansat', 'CANSAT56G3971' => 'cansat', 'CANSAT56G4116' => 'cansat', 'CANSAT80G1259' => 'cansat', 'CARHR027730' => 'chi', 'CARHR033880' => 'chi', 'CARHR043270' => 'chi', 'CARHR145330' => 'chi', 'CARHR145340' => 'chi', 'CARHR175570' => 'chi', 'CARHR181570' => 'chi', 'CARHR258470' => 'chi', 'CARHR260490' => 'chi', 'CARHR294220' => 'chi', 'Carub.0001s2668' => 'cru', 'Carub.0001s3257' => 'cru', 'Carub.0001s4220' => 'cru', 'Carub.0005s0179' => 'cru', 'Carub.0006s2807' => 'cru', 'Carub.0007s0039' => 'cru', 'Carub.0008s0169' => 'cru', 'Carub.0008s0636' => 'cru', 'Ca_00338_v3' => 'car', 'Ca_00542_v3' => 'car', 'Ca_01844_v3' => 'car', 'Ca_10611_v3' => 'car', 'Ca_13326_v3' => 'car', 'Ca_17944_v3' => 'car', 'Ca_18546_v3' => 'car', 'Ca_24219_v3' => 'car', 'Ca_29972_v3' => 'car', 'CBR_g3681' => 'cbr', 'CBR_g40021' => 'cbr', 'Cc01_g08140' => 'ccan', 'Cc02_g13410' => 'ccan', 'Cc02_g37480' => 'ccan', 'Cc05_g12030' => 'ccan', 'Cc09_g03370' => 'ccan', 'Cc09_g10300' => 'ccan', 'Cc10_g03530' => 'ccan', 'Cc10_g11380' => 'ccan', 'CDE01G0176' => 'cde', 'CDE02G0675' => 'cde', 'CDE02G0942' => 'cde', 'CDE02G1153' => 'cde', 'CDE02G4177' => 'cde', 'CDE04G2117' => 'cde', 'CDE04G2736' => 'cde', 'CDE08G1161' => 'cde', 'CDE09G1238' => 'cde', 'Cfa000467' => 'cfa', 'Cfa000947' => 'cfa', 'Cfa004969' => 'cfa', 'Cfa005284' => 'cfa', 'Cfa008993' => 'cfa', 'Cfa018187' => 'cfa', 'Cfa018454' => 'cfa', 'Cfa020585' => 'cfa', 'Ciclev10000424m.g' => 'ccl', 'Ciclev10003605m.g' => 'ccl', 'Ciclev10007828m.g' => 'ccl', 'Ciclev10014620m.g' => 'ccl', 'Ciclev10015169m.g' => 'ccl', 'Ciclev10018291m.g' => 'ccl', 'Ciclev10028256m.g' => 'ccl', 'Ciclev10033822m.g' => 'ccl', 'CiPaw.05G060300' => 'cil', 'CiPaw.05G085000' => 'cil', 'CiPaw.06G083700' => 'cil', 'CiPaw.06G120300' => 'cil', 'CiPaw.09G060500' => 'cil', 'CiPaw.09G123800' => 'cil', 'CiPaw.11G169700' => 'cil', 'CiPaw.12G118300' => 'cil', 'CiPaw.15G071000' => 'cil', 'CiPaw.15G081900' => 'cil', 'ClCG01G024610' => 'cla', 'ClCG03G006070' => 'cla', 'ClCG05G019250' => 'cla', 'ClCG09G009500' => 'cla', 'ClCG11G008200' => 'cla', 'ClCG11G018080' => 'cla', 'COL.COLO4_17373' => 'col', 'COL.COLO4_22994' => 'col', 'COL.COLO4_26389' => 'col', 'COL.COLO4_27170' => 'col', 'COL.COLO4_31074' => 'col', 'COL.COLO4_31465' => 'col', 'COL.COLO4_36438' => 'col', 'COL.COLO4_36439' => 'col', 'Cpa.g.c38781' => 'cpa', 'Cpa.g.sc128.12' => 'cpa', 'Cpa.g.sc166.7' => 'cpa', 'Cpa.g.sc166.8' => 'cpa', 'Cpa.g.sc20.111' => 'cpa', 'Cpa.g.sc27.31' => 'cpa', 'Cpa.g.sc64.36' => 'cpa', 'Cpa.g.sc64.37' => 'cpa', 'Cpa.g.sc66.49' => 'cpa', 'Cpa.g.sc80.64' => 'cpa', 'CsaV3_1G012320' => 'csa', 'CsaV3_2G008480' => 'csa', 'CsaV3_2G033450' => 'csa', 'CsaV3_3G044830' => 'csa', 'CsaV3_4G033710' => 'csa', 'CsaV3_6G051730' => 'csa', 'CsaV3_7G025350' => 'csa', 'CSS0001067' => 'camsi', 'CSS0005996' => 'camsi', 'CSS0006590' => 'camsi', 'CSS0009673' => 'camsi', 'CSS0010201' => 'camsi', 'CSS0010549' => 'camsi', 'CSS0011364' => 'camsi', 'CSS0014473' => 'camsi', 'CSS0014961' => 'camsi', 'CSS0020191' => 'camsi', 'CSS0021165' => 'camsi', 'CSS0022306' => 'camsi', 'CSS0030591' => 'camsi', 'CSS0030696' => 'camsi', 'CSS0032653' => 'camsi', 'CSS0037487' => 'camsi', 'CSS0041102' => 'camsi', 'CSS0041261' => 'camsi', 'CSS0046246' => 'camsi', 'CSS0049256' => 'camsi', 'DCAR_004075' => 'dca', 'DCAR_011538' => 'dca', 'DCAR_019553' => 'dca', 'DCAR_020952' => 'dca', 'DCAR_021739' => 'dca', 'DCAR_027407' => 'dca', 'DCAR_027913' => 'dca', 'DCAR_028066' => 'dca', 'Dinv05899' => 'din', 'Dinv07563' => 'din', 'Dinv08010' => 'din', 'Dinv14125' => 'din', 'Dinv20172' => 'din', 'Dinv30743' => 'din', 'Dinv31229' => 'din', 'Dinv34162' => 'din', 'Dinv36028' => 'din', 'Dinv39368' => 'din', 'Dinv40565' => 'din', 'Dinv41706' => 'din', 'Duzib052G0089' => 'dzi', 'Duzib116G0641' => 'dzi', 'Duzib132G0069' => 'dzi', 'Duzib132G1219' => 'dzi', 'Duzib147G0278' => 'dzi', 'Duzib160G0480' => 'dzi', 'Duzib170G0661' => 'dzi', 'Duzib177G0591' => 'dzi', 'Duzib187G1353' => 'dzi', 'Duzib192G0858' => 'dzi', 'Duzib192G0883' => 'dzi', 'Duzib213G0506' => 'dzi', 'Duzib235G0289' => 'dzi', 'Duzib251G0422' => 'dzi', 'ECA232G3898' => 'eca', 'ECA233G5950' => 'eca', 'ECA234G1699' => 'eca', 'ECA234G2421' => 'eca', 'ECA236G0426' => 'eca', 'ECA236G4331' => 'eca', 'ECA248G2573' => 'eca', 'EL10Ac1g00077' => 'bvu', 'EL10Ac1g01746' => 'bvu', 'EL10Ac2g03464' => 'bvu', 'EL10Ac4g08176' => 'bvu', 'EL10Ac7g17521' => 'bvu', 'EL10Ac8g20386' => 'bvu', 'EL10Ac9g21343' => 'bvu', 'EL10Ac9g22688' => 'bvu', 'Eucgr.B03434' => 'egr', 'Eucgr.D00618' => 'egr', 'Eucgr.E02395' => 'egr', 'Eucgr.F01129' => 'egr', 'Eucgr.F02622' => 'egr', 'Eucgr.F04207' => 'egr', 'FAN01G0570' => 'fan', 'FAN03G3351' => 'fan', 'FAN06G3702' => 'fan', 'FAN07G2149' => 'fan', 'FAN10G3758' => 'fan', 'FAN11G1170' => 'fan', 'FAN11G2050' => 'fan', 'FAN11G2724' => 'fan', 'FAN12G1700' => 'fan', 'FAN12G2028' => 'fan', 'FAN15G1160' => 'fan', 'FAN15G3063' => 'fan', 'FAN16G2540' => 'fan', 'FAN16G3077' => 'fan', 'FAN16G3624' => 'fan', 'FAN17G0221' => 'fan', 'FAN20G2492' => 'fan', 'FAN20G2905' => 'fan', 'FAN21G0548' => 'fan', 'FAN21G1300' => 'fan', 'FAN22G0077' => 'fan', 'FAN22G1315' => 'fan', 'FAN24G1280' => 'fan', 'FAN24G1445' => 'fan', 'FAN24G3527' => 'fan', 'FAN25G0464' => 'fan', 'FAN25G2885' => 'fan', 'FAN25G3270' => 'fan', 'FAN27G1101' => 'fan', 'FAN27G2846' => 'fan', 'FAN27G3524' => 'fan', 'FvH4_2g11770' => 'fve', 'FvH4_2g15630' => 'fve', 'FvH4_3g05570' => 'fve', 'FvH4_3g09110' => 'fve', 'FvH4_3g19940' => 'fve', 'FvH4_4g04821' => 'fve', 'FvH4_4g31480' => 'fve', 'FvH4_7g01740' => 'fve', 'Glyma.05G130400' => 'gma', 'Glyma.05G156400' => 'gma', 'Glyma.07G197000' => 'gma', 'Glyma.08G085151' => 'gma', 'Glyma.08G114500' => 'gma', 'Glyma.08G300400' => 'gma', 'Glyma.10G215800' => 'gma', 'Glyma.12G224400' => 'gma', 'Glyma.13G179300' => 'gma', 'Glyma.13G218151' => 'gma', 'Glyma.13G238800' => 'gma', 'Glyma.13G276900' => 'gma', 'Glyma.14G078200' => 'gma', 'Glyma.15G074500' => 'gma', 'Glyma.15G094100' => 'gma', 'Glyma.17G247200' => 'gma', 'Glyma.18G120100' => 'gma', 'Glyma.20G176000' => 'gma', 'Gohir.A01G063600' => 'ghi', 'Gohir.A01G170301' => 'ghi', 'Gohir.A02G060500' => 'ghi', 'Gohir.A05G133850' => 'ghi', 'Gohir.A05G161400' => 'ghi', 'Gohir.A06G012900' => 'ghi', 'Gohir.A06G035901' => 'ghi', 'Gohir.A06G127100' => 'ghi', 'Gohir.A06G210500' => 'ghi', 'Gohir.A08G008650' => 'ghi', 'Gohir.A09G072700' => 'ghi', 'Gohir.A09G088301' => 'ghi', 'Gohir.A10G040600' => 'ghi', 'Gohir.A12G036300' => 'ghi', 'Gohir.A12G143350' => 'ghi', 'Gohir.A12G165500' => 'ghi', 'Gohir.A13G145700' => 'ghi', 'Gohir.D01G050000' => 'ghi', 'Gohir.D01G051366' => 'ghi', 'Gohir.D01G161350' => 'ghi', 'Gohir.D02G065900' => 'ghi', 'Gohir.D05G164200' => 'ghi', 'Gohir.D05G355500' => 'ghi', 'Gohir.D06G010400' => 'ghi', 'Gohir.D06G111250' => 'ghi', 'Gohir.D06G132000' => 'ghi', 'Gohir.D06G210500' => 'ghi', 'Gohir.D07G165675' => 'ghi', 'Gohir.D08G062240' => 'ghi', 'Gohir.D08G086101' => 'ghi', 'Gohir.D08G138060' => 'ghi', 'Gohir.D09G072300' => 'ghi', 'Gohir.D10G041400' => 'ghi', 'Gohir.D11G191020' => 'ghi', 'Gohir.D11G212066' => 'ghi', 'Gohir.D12G036300' => 'ghi', 'Gohir.D12G168600' => 'ghi', 'Gohir.D13G150600' => 'ghi', 'Gorai.001G057300' => 'gra', 'Gorai.002G069900' => 'gra', 'Gorai.002G200000' => 'gra', 'Gorai.003G067600' => 'gra', 'Gorai.005G074800' => 'gra', 'Gorai.006G087300' => 'gra', 'Gorai.008G037500' => 'gra', 'Gorai.008G181400' => 'gra', 'Gorai.009G169400' => 'gra', 'Gorai.009G387900' => 'gra', 'Gorai.010G013300' => 'gra', 'Gorai.010G153800' => 'gra', 'Gorai.010G255800' => 'gra', 'Gorai.011G043700' => 'gra', 'Gorai.011G198900' => 'gra', 'Gorai.013G168400' => 'gra', 'GSVIVG01005212001' => 'vvi', 'GSVIVG01006163001' => 'vvi', 'GSVIVG01009625001' => 'vvi', 'GSVIVG01014338001' => 'vvi', 'GSVIVG01020005001' => 'vvi', 'GSVIVG01021450001' => 'vvi', 'GSVIVG01023975001' => 'vvi', 'GSVIVG01034490001' => 'vvi', 'HanXRQChr04g0112071' => 'han', 'HanXRQChr05g0131151' => 'han', 'HanXRQChr09g0262371' => 'han', 'HanXRQChr09g0268401' => 'han', 'HanXRQChr10g0279241' => 'han', 'HanXRQChr10g0297961' => 'han', 'HanXRQChr11g0326231' => 'han', 'HanXRQChr11g0328471' => 'han', 'HanXRQChr16g0507941' => 'han', 'HanXRQChr17g0560211' => 'han', 'Haze_02108' => 'cav', 'Haze_02428' => 'cav', 'Haze_05593' => 'cav', 'Haze_06448' => 'cav', 'Haze_09427' => 'cav', 'Haze_12022' => 'cav', 'Haze_17612' => 'cav', 'Haze_17928' => 'cav', 'Hma1.2p1_0032F.1_g019250' => 'hma', 'Hma1.2p1_0163F.1_g072690' => 'hma', 'Hma1.2p1_0265F.1_g106710' => 'hma', 'Hma1.2p1_0286F.1_g113970' => 'hma', 'Hma1.2p1_0363F.1_g136640' => 'hma', 'Hma1.2p1_0584F.1_g183470' => 'hma', 'Hma1.2p1_0885F.1_g232570' => 'hma', 'HPP92_006022' => 'vpl', 'HPP92_007320' => 'vpl', 'HPP92_011521' => 'vpl', 'HPP92_019387' => 'vpl', 'HPP92_024038' => 'vpl', 'Hund05891' => 'sun', 'Hund06450' => 'sun', 'Hund12053' => 'sun', 'Hund16800' => 'sun', 'Hund21222' => 'sun', 'Hund22896' => 'sun', 'Hund23746' => 'sun', 'Hund27083' => 'sun', 'Lalb_Chr02g0141831' => 'lal', 'Lalb_Chr02g0141841' => 'lal', 'Lalb_Chr05g0220411' => 'lal', 'Lalb_Chr06g0162081' => 'lal', 'Lalb_Chr09g0327651' => 'lal', 'Lalb_Chr13g0295051' => 'lal', 'Lalb_Chr15g0086801' => 'lal', 'Lalb_Chr16g0383781' => 'lal', 'Lalb_Chr16g0383791' => 'lal', 'Lalb_Chr18g0055441' => 'lal', 'Lalb_Chr18g0059611' => 'lal', 'Lalb_Chr20g0109661' => 'lal', 'Lalb_Chr20g0109831' => 'lal', 'Lalb_Chr20g0121871' => 'lal', 'Lalb_Chr22g0355361' => 'lal', 'Lalb_Chr25g0286371' => 'lal', 'Lj1A1187G43' => 'lonja', 'Lj1A1205T50' => 'lonja', 'Lj1A800G33' => 'lonja', 'Lj1C1187T7' => 'lonja', 'Lj1C843T11' => 'lonja', 'Lj1g0010940' => 'lja', 'Lj2A288T69' => 'lonja', 'Lj3g0024276' => 'lja', 'Lj4A47T76' => 'lonja', 'Lj4g0005805' => 'lja', 'Lj4g0006097' => 'lja', 'Lj4g0008528' => 'lja', 'Lj4g0024907' => 'lja', 'Lj5g0012472' => 'lja', 'Lj5g0018648' => 'lja', 'Lj6C789G1' => 'lonja', 'Lj6g0004000' => 'lja', 'Lj7A292G67' => 'lonja', 'Lj7A292T64' => 'lonja', 'Lj9A400T58' => 'lonja', 'Lsat_1_v5_gn_1_126181' => 'lsa', 'Lsat_1_v5_gn_4_123041' => 'lsa', 'Lsat_1_v5_gn_4_133620' => 'lsa', 'Lsat_1_v5_gn_4_53221' => 'lsa', 'Lsat_1_v5_gn_4_71961' => 'lsa', 'Lsat_1_v5_gn_7_105241' => 'lsa', 'Lsat_1_v5_gn_7_21361' => 'lsa', 'Lsat_1_v5_gn_7_28860' => 'lsa', 'Lsat_1_v5_gn_7_31260' => 'lsa', 'Lsat_1_v5_gn_8_52801' => 'lsa', 'Manes.02G191400' => 'mes', 'Manes.03G110100' => 'mes', 'Manes.04G071100' => 'mes', 'Manes.05G100500' => 'mes', 'Manes.05G164700' => 'mes', 'Manes.15G087000' => 'mes', 'Manes.15G121500' => 'mes', 'Manes.16G028300' => 'mes', 'Manes.17G046100' => 'mes', 'Manes.17G069800' => 'mes', 'Manes.18G100500' => 'mes', 'Mapoly0002s0109' => 'mpo', 'Mapoly0024s0007' => 'mpo', 'Mapoly0089s0032' => 'mpo', 'MBI04_g42241_MAGBIO' => 'mbi', 'MBI05_g11988_MAGBIO' => 'mbi', 'MBI05_g35452_MAGBIO' => 'mbi', 'MBI07_g30179_MAGBIO' => 'mbi', 'MBI07_g35859_MAGBIO' => 'mbi', 'MBI07_g35860_MAGBIO' => 'mbi', 'MBI07_g37166_MAGBIO' => 'mbi', 'MBI08_g18172_MAGBIO' => 'mbi', 'MBI09_g08441_MAGBIO' => 'mbi', 'MBI13_g01676_MAGBIO' => 'mbi', 'MBI14_g42955_MAGBIO' => 'mbi', 'MBI16_g13161_MAGBIO' => 'mbi', 'MBI17_g27204_MAGBIO' => 'mbi', 'MBI19_g21595_MAGBIO' => 'mbi', 'MD00G1148400' => 'mdo', 'MD02G1301200' => 'mdo', 'MD03G1227800' => 'mdo', 'MD05G1041100' => 'mdo', 'MD05G1124800' => 'mdo', 'MD05G1284000' => 'mdo', 'MD05G1338800' => 'mdo', 'MD05G1338900' => 'mdo', 'MD07G1022800' => 'mdo', 'MD10G1047500' => 'mdo', 'MD10G1127500' => 'mdo', 'MD10G1262300' => 'mdo', 'MD10G1293800' => 'mdo', 'MD16G1074300' => 'mdo', 'Medtr1g021670' => 'mtr', 'Medtr1g096320' => 'mtr', 'Medtr2g013690' => 'mtr', 'Medtr2g019450' => 'mtr', 'Medtr2g085170' => 'mtr', 'Medtr4g088785' => 'mtr', 'Medtr8g055930' => 'mtr', 'Medtr8g085850' => 'mtr', 'MELO3C002605.2' => 'cme', 'MELO3C003891.2' => 'cme', 'MELO3C004012.2' => 'cme', 'MELO3C007134.2' => 'cme', 'MELO3C008118.2' => 'cme', 'MELO3C016700.2' => 'cme', 'MELO3C024127.2' => 'cme', 'MELO3C033361.2' => 'cme', 'MELO3C033362.2' => 'cme', 'Migut.C00430' => 'egut', 'Migut.C01246' => 'egut', 'Migut.E00101' => 'egut', 'Migut.H01486' => 'egut', 'Migut.H01939' => 'egut', 'Migut.K00360' => 'egut', 'Migut.M00910' => 'egut', 'Migut.M01139' => 'egut', 'Migut.N02677' => 'egut', 'MSTRG.13252' => 'ama', 'MSTRG.14701' => 'ama', 'MSTRG.1521' => 'ama', 'MSTRG.15884' => 'ama', 'MSTRG.16242' => 'ama', 'MSTRG.22285' => 'ama', 'MSTRG.22444' => 'ama', 'MSTRG.2349' => 'ama', 'MSTRG.26308' => 'ama', 'MSTRG.28296' => 'ama', 'MSTRG.9895' => 'ama', 'Nitab4.5_0000110g0060' => 'nta', 'Nitab4.5_0000420g0130' => 'nta', 'Nitab4.5_0000422g0030' => 'nta', 'Nitab4.5_0000560g0180' => 'nta', 'Nitab4.5_0000703g0100' => 'nta', 'Nitab4.5_0000786g0200' => 'nta', 'Nitab4.5_0001336g0020' => 'nta', 'Nitab4.5_0001796g0030' => 'nta', 'Nitab4.5_0003348g0060' => 'nta', 'Nitab4.5_0003698g0040' => 'nta', 'Nitab4.5_0003942g0090' => 'nta', 'Nitab4.5_0004775g0070' => 'nta', 'Nitab4.5_0004864g0030' => 'nta', 'Nitab4.5_0005615g0020' => 'nta', 'Nitab4.5_0009288g0030' => 'nta', 'Nitab4.5_0009341g0010' => 'nta', 'Nitab4.5_0009535g0010' => 'nta', 'Nn1g03995' => 'nnu', 'Nn1g04100' => 'nnu', 'Nn1g06530' => 'nnu', 'Nn3g16404' => 'nnu', 'Nn3g17212' => 'nnu', 'Nn3g20776' => 'nnu', 'Nn3g21923' => 'nnu', 'Nn5g27737' => 'nnu', 'Nn5g29461' => 'nnu', 'Nn7g38355' => 'nnu', 'Nn8g39873' => 'nnu', 'Oeu000548.2' => 'oeu', 'Oeu004672.1' => 'oeu', 'Oeu015605.2' => 'oeu', 'Oeu016092.1' => 'oeu', 'Oeu017879.3' => 'oeu', 'Oeu024910.1' => 'oeu', 'Oeu028965.1' => 'oeu', 'Oeu031269.1' => 'oeu', 'Oeu031270.1' => 'oeu', 'Oeu032535.1' => 'oeu', 'Oeu034151.1' => 'oeu', 'Oeu034152.1' => 'oeu', 'Oeu034588.2' => 'oeu', 'Oeu050846.1' => 'oeu', 'Oeu050849.2' => 'oeu', 'Oeu051063.2' => 'oeu', 'Oeu052368.1' => 'oeu', 'Oeu052370.1' => 'oeu', 'Os01g0210400' => 'osa', 'Os01g0304300' => 'osa', 'Os01g0749100' => 'osa', 'Os02g0745800' => 'osa', 'Os03g0769050' => 'osa', 'Os05g0531500' => 'osa', 'Os06g0724300' => 'osa', 'Os11g0198100' => 'osa', 'Peaxi162Scf00069g01425' => 'pax', 'Peaxi162Scf00280g00811' => 'pax', 'Peaxi162Scf00310g00615' => 'pax', 'Peaxi162Scf00362g00542' => 'pax', 'Peaxi162Scf00461g00310' => 'pax', 'Peaxi162Scf00530g00118' => 'pax', 'Peaxi162Scf00541g00057' => 'pax', 'Peaxi162Scf00661g00017' => 'pax', 'Peaxi162Scf00926g00027' => 'pax', 'Peaxi162Scf01064g00263' => 'pax', 'Peaxi162Scf01211g00135' => 'pax', 'PGR004G2336' => 'pgr', 'PGR042G0327' => 'pgr', 'PGR042G1957' => 'pgr', 'PGR042G2003' => 'pgr', 'PGR042G3929' => 'pgr', 'PGR083G1137' => 'pgr', 'PGR083G1364' => 'pgr', 'PGSC0003DMG400003381' => 'stu', 'PGSC0003DMG400003417' => 'stu', 'PGSC0003DMG400008981' => 'stu', 'PGSC0003DMG400012417' => 'stu', 'PGSC0003DMG400012823' => 'stu', 'PGSC0003DMG400016885' => 'stu', 'PGSC0003DMG400022812' => 'stu', 'PGSC0003DMG400029726' => 'stu', 'PGSC0003DMG401009243' => 'stu', 'PGSC0003DMG401031505' => 'stu', 'PGSC0003DMG402031505' => 'stu', 'Phvul.001G017600' => 'pvu', 'Phvul.002G193500' => 'pvu', 'Phvul.002G228900' => 'pvu', 'Phvul.002G236800' => 'pvu', 'Phvul.003G049500' => 'pvu', 'Phvul.005G072000' => 'pvu', 'Phvul.006G164800' => 'pvu', 'Phvul.006G185100' => 'pvu', 'Phvul.007G090000' => 'pvu', 'Potri.001G399800' => 'ptr', 'Potri.002G149900' => 'ptr', 'Potri.004G044100' => 'ptr', 'Potri.004G177600' => 'ptr', 'Potri.009G138000' => 'ptr', 'Potri.010G094000' => 'ptr', 'Potri.011G053000' => 'ptr', 'Potri.011G119300' => 'ptr', 'Potri.013G113700' => 'ptr', 'Potri.018G107800' => 'ptr', 'Potri.019G084100' => 'ptr', 'Pp3c14_23720' => 'ppa', 'Pp3c16_6340' => 'ppa', 'Pp3c23_13420' => 'ppa', 'Pp3c24_2740' => 'ppa', 'Pp3c25_860' => 'ppa', 'Pp3c8_21750' => 'ppa', 'Prupe.1G273000' => 'ppe', 'Prupe.1G273700' => 'ppe', 'Prupe.1G274100' => 'ppe', 'Prupe.2G023300' => 'ppe', 'Prupe.4G048000' => 'ppe', 'Prupe.4G080400' => 'ppe', 'Prupe.4G181200' => 'ppe', 'Prupe.8G056900' => 'ppe', 'Prupe.8G168700' => 'ppe', 'Psat1g189080' => 'psa', 'Psat1g204760' => 'psa', 'Psat4g175560' => 'psa', 'Psat4g177720' => 'psa', 'Psat5g244240' => 'psa', 'Psat6g010720' => 'psa', 'Psat6g187200' => 'psa', 'Psat7g072040' => 'psa', 'PSO017G3501' => 'pso', 'PSO063G2148' => 'pso', 'PSO063G5608' => 'pso', 'PSO210G6392' => 'pso', 'PSO541G2319' => 'pso', 'PSO541G2836' => 'pso', 'PSO541G4012' => 'pso', 'PSO541G6253' => 'pso', 'PSO675G0580' => 'pso', 'PSO675G0856' => 'pso', 'PSO675G5635' => 'pso', 'PSO675G9157' => 'pso', 'PSO832G1660' => 'pso', 'PSO832G1969' => 'pso', 'QL02p007186' => 'qlo', 'QL02p033904' => 'qlo', 'QL03p064391' => 'qlo', 'QL05p040593' => 'qlo', 'QL05p058242' => 'qlo', 'QL08p021825' => 'qlo', 'QL11p004981' => 'qlo', 'RcHm_v2.0_Chr1g0318301' => 'rch', 'RcHm_v2.0_Chr4g0418501' => 'rch', 'RcHm_v2.0_Chr4g0439971' => 'rch', 'RcHm_v2.0_Chr5g0008541' => 'rch', 'RcHm_v2.0_Chr5g0014101' => 'rch', 'RcHm_v2.0_Chr5g0014131' => 'rch', 'RcHm_v2.0_Chr5g0033621' => 'rch', 'RcHm_v2.0_Chr6g0272041' => 'rch', 'RcHm_v2.0_Chr6g0278831' => 'rch', 'Rhsim02G0130400' => 'rsi', 'Rhsim02G0171100' => 'rsi', 'Rhsim05G0053000' => 'rsi', 'Rhsim05G0053100' => 'rsi', 'Rhsim06G0096500' => 'rsi', 'Rhsim06G0096600' => 'rsi', 'Rhsim06G0199100' => 'rsi', 'Rhsim12G0062300' => 'rsi', 'Rhsim12G0062800' => 'rsi', 'Sabra02G0118600' => 'sbr', 'Sabra04G0027300' => 'sbr', 'Sabra04G0119500' => 'sbr', 'Sabra08G0112500' => 'sbr', 'Sabra11G0036800' => 'sbr', 'Sabra11G0103800' => 'sbr', 'Sabra13G0096300' => 'sbr', 'Sabra16G0262300' => 'sbr', 'Sabra18G0091700' => 'sbr', 'Sabra19G0095400' => 'sbr', 'SalBow6G3080' => 'sbo', 'SalBow7G1157' => 'sbo', 'SalBow7G2123' => 'sbo', 'SalBow7G2285' => 'sbo', 'SalBow7G3537' => 'sbo', 'SalBow8G2947' => 'sbo', 'SalBow8G4463' => 'sbo', 'SalBow8G5466' => 'sbo', 'Sc01g0001750' => 'sci', 'Sc02g0006640' => 'sci', 'Sc02g0006670' => 'sci', 'Sc04g0008220' => 'sci', 'Sc05g0006190' => 'sci', 'Sc08g0002760' => 'sci', 'Sc17g0006170' => 'sci', 'Sc22g0002050' => 'sci', 'Sc23g0001190' => 'sci', 'Sc24g0000980' => 'sci', 'Sed0006245' => 'sed', 'Sed0007543' => 'sed', 'Sed0009411' => 'sed', 'Sed0010765' => 'sed', 'Sed0012944' => 'sed', 'Sed0014682' => 'sed', 'Sed0016174' => 'sed', 'Sed0016796' => 'sed', 'Sed0020317' => 'sed', 'Sed0021467' => 'sed', 'SEGI_01316' => 'sgi', 'SEGI_03374' => 'sgi', 'SEGI_16265' => 'sgi', 'SEGI_18569' => 'sgi', 'SEGI_20351' => 'sgi', 'SEGI_26395' => 'sgi', 'SEGI_29469' => 'sgi', 'SEGI_34771' => 'sgi', 'SEGI_36769' => 'sgi', 'SEGI_37139' => 'sgi', 'SGA_v2.0_scaffold100G29687' => 'sas', 'SGA_v2.0_scaffold118G32472' => 'sas', 'SGA_v2.0_scaffold14G07051' => 'sas', 'SGA_v2.0_scaffold183G39845' => 'sas', 'SGA_v2.0_scaffold1G00174' => 'sas', 'SGA_v2.0_scaffold22G09714' => 'sas', 'SGA_v2.0_scaffold333G48992' => 'sas', 'SGA_v2.0_scaffold46G17491' => 'sas', 'SGA_v2.0_scaffold49G18294' => 'sas', 'SGA_v2.0_scaffold63G21658' => 'sas', 'SHI01741' => 'shi', 'SHI05771' => 'shi', 'SHI18077' => 'shi', 'SHI20525' => 'shi', 'SHI20527' => 'shi', 'SHI20528' => 'shi', 'SMO172G0185' => 'smo', 'SMO198G0020' => 'smo', 'SMO351G0006' => 'smo', 'SMO356G0118' => 'smo', 'SMO358G0296' => 'smo', 'SMO367G0079' => 'smo', 'SMO367G1277' => 'smo', 'Solyc01g014220.3' => 'sly', 'Solyc01g111770.2' => 'sly', 'Solyc02g078180.3' => 'sly', 'Solyc03g006430.3' => 'sly', 'Solyc03g006456.1' => 'sly', 'Solyc03g079860.2' => 'sly', 'Solyc04g079770.3' => 'sly', 'Solyc05g007430.4' => 'sly', 'Solyc07g063150.3' => 'sly', 'Solyc08g016620.3' => 'sly', 'Solyc09g057590.3' => 'sly', 'Solyc09g057600.1' => 'sly', 'Solyc10g009050.3' => 'sly', 'Solyc11g017420.2' => 'sly', 'Sopen01g053810' => 'spe', 'Sopen02g023040' => 'spe', 'Sopen03g002440' => 'spe', 'Sopen04g033350' => 'spe', 'Sopen05g003310' => 'spe', 'Sopen07g004050' => 'spe', 'Sopen07g031340' => 'spe', 'Sopen08g006990' => 'spe', 'Sopen10g004830' => 'spe', 'Sopen11g009370' => 'spe', 'Sp1g24450' => 'spa', 'Sp1g29670' => 'spa', 'Sp1g39600' => 'spa', 'Sp2g11080' => 'spa', 'Sp2g13970' => 'spa', 'Sp4g16130' => 'spa', 'Sp6g13080' => 'spa', 'Sp7g37270' => 'spa', 'TAR371G0065' => 'tar', 'TAR376G0340' => 'tar', 'TAR376G0435' => 'tar', 'TAR381G0002' => 'tar', 'TAR381G1236' => 'tar', 'TAR624G0055' => 'tar', 'TAR624G0324' => 'tar', 'TAR624G0696' => 'tar', 'TAR624G0906' => 'tar', 'TAR625G0107' => 'tar', 'TAR626G0015' => 'tar', 'TAR626G1356' => 'tar', 'TAR627G0888' => 'tar', 'TAR628G0399' => 'tar', 'TAR628G1327' => 'tar', 'TAR629G2831' => 'tar', 'TAR629G2874' => 'tar', 'TAR633G1432' => 'tar', 'TAR633G2771' => 'tar', 'THA.LOC104803394' => 'tha', 'THA.LOC104805153' => 'tha', 'THA.LOC104806784' => 'tha', 'THA.LOC104810473' => 'tha', 'THA.LOC104813100' => 'tha', 'THA.LOC104814215' => 'tha', 'THA.LOC104815554' => 'tha', 'THA.LOC104820544' => 'tha', 'THA.LOC104824754' => 'tha', 'THA.LOC104827717' => 'tha', 'Thecc.02G031400' => 'tca', 'Thecc.02G055900' => 'tca', 'Thecc.02G350800' => 'tca', 'Thecc.06G150900' => 'tca', 'Thecc.06G186600' => 'tca', 'Thecc.07G089600' => 'tca', 'Thecc.08G020400' => 'tca', 'Thecc.08G182100' => 'tca', 'Thhalv10000873m.g' => 'esa', 'Thhalv10004185m.g' => 'esa', 'Thhalv10006981m.g' => 'esa', 'Thhalv10007204m.g' => 'esa', 'Thhalv10011374m.g' => 'esa', 'Thhalv10013482m.g' => 'esa', 'Thhalv10017801m.g' => 'esa', 'Thhalv10024983m.g' => 'esa', 'TPR.G12072' => 'tpr', 'TPR.G15769' => 'tpr', 'TPR.G16504' => 'tpr', 'TPR.G16506' => 'tpr', 'TPR.G24345' => 'tpr', 'TPR.G26666' => 'tpr', 'TPR.G27320' => 'tpr', 'TPR.G31819' => 'tpr', 'TPR.G38879' => 'tpr', 'TPR.G39015' => 'tpr', 'TPR.G8819' => 'tpr', 'TWI09G0924' => 'twi', 'TWI12G0811' => 'twi', 'TWI12G1294' => 'twi', 'TWI31G0150' => 'twi', 'TWI36G1262' => 'twi', 'TWI38G1287' => 'twi', 'TWI38G1633' => 'twi', 'TWI38G1982' => 'twi', 'TWI39G0116' => 'twi', 'TWI60G1011' => 'twi', 'TWI63G0171' => 'twi', 'TWI73G0839' => 'twi', 'TWI79G1511' => 'twi', 'unitig_0.g915' => 'ugi', 'unitig_0.g916' => 'ugi', 'unitig_21.g20219' => 'ugi', 'unitig_21.g20416' => 'ugi', 'unitig_578.g16132' => 'ugi', 'unitig_578.g16718' => 'ugi', 'unitig_62.g23481' => 'ugi', 'unitig_744.g24535' => 'ugi', 'unitig_749.g13525' => 'ugi', 'vmacro01248' => 'vma', 'vmacro02290' => 'vma', 'vmacro10946' => 'vma', 'vmacro11865' => 'vma', 'vmacro12493' => 'vma', 'vmacro17322' => 'vma', 'vmacro21599' => 'vma', 'vmacro23041' => 'vma', 'VMungo0251G0004' => 'vmu', 'VMungo0251G2639' => 'vmu', 'VMungo0251G2967' => 'vmu', 'VMungo0540G0864' => 'vmu', 'VMungo0540G1569' => 'vmu', 'VMungo0647G0317' => 'vmu', 'VMungo0720G1373' => 'vmu', 'VMungo0720G1508' => 'vmu', 'VMungo1080G0485' => 'vmu', 'VMungo1215G3177' => 'vmu', 'Zm00001eb112600' => 'zma', 'Zm00001eb120220' => 'zma', 'Zm00001eb153240' => 'zma', 'Zm00001eb168880' => 'zma', 'Zm00001eb213920' => 'zma', 'Zm00001eb228280' => 'zma', 'Zm00001eb254580' => 'zma', 'Zm00001eb272180' => 'zma', 'Zm00001eb293190' => 'zma', 'Zm00001eb322930' => 'zma', 'Zm00001eb353360' => 'zma', 'Zm00001eb353390' => 'zma', 'Zm00001eb353430' => 'zma', 'Zm00001eb353440' => 'zma', 'Zm00001eb353780' => 'zma' ) $gf_id = 'HOM05D000499' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000499' ) $data_identifier = 'HOM05D000499' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 29, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 12, 'amhyb' => (int) 8, 'aly' => (int) 12, 'aox' => (int) 9, 'arhy' => (int) 26, 'ath' => (int) 8, 'atr' => (int) 7, 'acertr' => (int) 10, 'cqu' => (int) 15, 'bca' => (int) 29, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 11, 'cansat' => (int) 8, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 9, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 8, 'cpa' => (int) 10, 'csa' => (int) 7, 'camsi' => (int) 20, 'dca' => (int) 8, 'din' => (int) 12, 'dzi' => (int) 14, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 6, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 38, 'gra' => (int) 16, 'vvi' => (int) 8, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 5, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 11, 'lja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 11, 'mpo' => (int) 3, 'mbi' => (int) 14, 'mdo' => (int) 14, 'mtr' => (int) 8, 'cme' => (int) 9, 'egut' => (int) 9, 'ama' => (int) 11, 'nta' => (int) 17, 'nnu' => (int) 11, 'oeu' => (int) 18, 'osa' => (int) 8, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 6, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 9, 'rsi' => (int) 9, 'sbr' => (int) 10, 'sbo' => (int) 8, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 10, 'sas' => (int) 10, 'shi' => (int) 6, 'smo' => (int) 7, 'sly' => (int) 14, 'spe' => (int) 10, 'spa' => (int) 8, 'tar' => (int) 19, 'tha' => (int) 10, 'tca' => (int) 8, 'esa' => (int) 8, 'tpr' => (int) 11, 'twi' => (int) 13, 'ugi' => (int) 9, 'vma' => (int) 8, 'vmu' => (int) 10, 'zma' => (int) 15 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb353780' $species_info = array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ) $local_species = 'atr' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000499', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1066', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p29780' => 'bna', 'A02p33180' => 'bna', 'A03p16470' => 'bna', 'A03p66010' => 'bna', 'A04p25970' => 'bna', 'A06p01270' => 'bna', 'A06p46080' => 'bna', 'A07p11400' => 'bna', 'A08p01840' => 'bna', 'A08p08230' => 'bna', 'A08p25740' => 'bna', 'A09p32070' => 'bna', 'A09p37830' => 'bna', 'A09p42840' => 'bna', 'A09p42850' => 'bna', 'Aa31LG10G2060' => 'aar', 'Aa31LG2G7410' => 'aar', 'Aa31LG6G10200' => 'aar', 'Aa31LG6G16680' => 'aar', 'Aa31LG6G8470' => 'aar', 'Aa31LG9G12730' => 'aar', 'Aa31LG9G13680' => 'aar', 'Aa31LG9G14920' => 'aar', 'Aa31LG9G6650' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4977' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5467' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3254' => 'aag', 'Actinidia02578' => 'ach', 'Actinidia07693' => 'ach', 'Actinidia08413' => 'ach', 'Actinidia08414' => 'ach', 'Actinidia15289' => 'ach', 'Actinidia19871' => 'ach', 'Actinidia21475' => 'ach', 'Actinidia22576' => 'ach', 'Actinidia28327' => 'ach', 'Actinidia32491' => 'ach', 'Actinidia39463' => 'ach', 'Actinidia39571' => 'ach', 'Ah.01g013750' => 'amhyb', 'Ah.01g023210' => 'amhyb', 'Ah.04g164850' => 'amhyb', 'Ah.05g178060' => 'amhyb', 'Ah.07g204270' => 'amhyb', 'Ah.07g208480' => 'amhyb', 'Ah.09g237410' => 'amhyb', 'Ah.14g089460' => 'amhyb', 'AL1G41790' => 'aly', 'AL1G49050' => 'aly', 'AL1G53810' => 'aly', 'AL1G61400' => 'aly', 'AL4G18580' => 'aly', 'AL5G12510' => 'aly', 'AL5G12540' => 'aly', 'AL6G43230' => 'aly', 'AL7G10370' => 'aly', 'AL7G19250' => 'aly', 'AL8G12240' => 'aly', 'AL8G18540' => 'aly', 'Aqoxy1G02409' => 'aox', 'Aqoxy2G03993' => 'aox', 'Aqoxy3G03357' => 'aox', 'Aqoxy4G00785' => 'aox', 'Aqoxy5G02598' => 'aox', 'Aqoxy6G00132' => 'aox', 'Aqoxy7G01776' => 'aox', 'Aqoxy7G02316' => 'aox', 'Aqoxy7G03973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.12AFKW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B8730' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27IQR1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3F75VG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3RE0GA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41TCQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.527VTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FIR39' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5W8UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DA38EV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ63HS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H1I32C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HC27T5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4M8AP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7N3CZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9UVDZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LS1NQA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT1D4B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SKC4TM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCFV76' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF9Q1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQWD9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1ZM88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WE07RT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YCK7VH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJE6Q6' => 'arhy', 'AT1G28240' => 'ath', 'AT1G34550' => 'ath', 'AT1G53040' => 'ath', 'AT2G02910' => 'ath', 'AT4G09630' => 'ath', 'AT4G38500' => 'ath', 'AT5G42660' => 'ath', 'AT5G46220' => 'ath', 'ATR0152G026' => 'atr', 'ATR0564G343' => 'atr', 'ATR0706G151' => 'atr', 'ATR0733G207' => 'atr', 'ATR0751G234' => 'atr', 'ATR0807G048' => 'atr', 'ATR1091G084' => 'atr', 'Atru.chr10.1229' => 'acertr', 'Atru.chr10.1230' => 'acertr', 'Atru.chr10.1874' => 'acertr', 'Atru.chr11.1808' => 'acertr', 'Atru.chr13.1795' => 'acertr', 'Atru.chr13.570' => 'acertr', 'Atru.chr2.2608' => 'acertr', 'Atru.chr2.2609' => 'acertr', 'Atru.chr5.3428' => 'acertr', 'Atru.chr8.1171' => 'acertr', 'AUR62004651' => 'cqu', 'AUR62008675' => 'cqu', 'AUR62010014' => 'cqu', 'AUR62013004' => 'cqu', 'AUR62014825' => 'cqu', 'AUR62015015' => 'cqu', 'AUR62015151' => 'cqu', 'AUR62017020' => 'cqu', 'AUR62019422' => 'cqu', 'AUR62023570' => 'cqu', 'AUR62025571' => 'cqu', 'AUR62029098' => 'cqu', 'AUR62033863' => 'cqu', 'AUR62034296' => 'cqu', 'AUR62040075' => 'cqu', 'BcaB02g07334' => 'bca', 'BcaB02g10575' => 'bca', 'BcaB03g12119' => 'bca', 'BcaB03g12120' => 'bca', 'BcaB03g13945' => 'bca', 'BcaB04g17123' => 'bca', 'BcaB04g17867' => 'bca', 'BcaB04g19839' => 'bca', 'BcaB07g30317' => 'bca', 'BcaB07g32432' => 'bca', 'BcaB07g33362' => 'bca', 'BcaB08g36611' => 'bca', 'BcaC01g00028' => 'bca', 'BcaC01g01356' => 'bca', 'BcaC01g02034' => 'bca', 'BcaC01g06051' => 'bca', 'BcaC03g16839' => 'bca', 'BcaC03g17176' => 'bca', 'BcaC05g26829' => 'bca', 'BcaC06g31490' => 'bca', 'BcaC06g35344' => 'bca', 'BcaC06g36570' => 'bca', 'BcaC07g37537' => 'bca', 'BcaC08g43491' => 'bca', 'BcaC08g43773' => 'bca', 'BcaNung00234' => 'bca', 'BcaNung01982' => 'bca', 'BcaNung03707' => 'bca', 'BcaNung06454' => 'bca', 'BolC2t10762H' => 'bol', 'BolC2t11191H' => 'bol', 'BolC3t14322H' => 'bol', 'BolC3t19747H' => 'bol', 'BolC3t21425H' => 'bol', 'BolC4t27800H' => 'bol', 'BolC5t31423H' => 'bol', 'BolC6t35951H' => 'bol', 'BolC6t36282H' => 'bol', 'BolC7t40678H' => 'bol', 'BolC7t40679H' => 'bol', 'BolC7t42222H' => 'bol', 'BolC7t43492H' => 'bol', 'BolC7t46785H' => 'bol', 'BolC8t47853H' => 'bol', 'BolC9t56805H' => 'bol', 'BraA02t08000Z' => 'bra', 'BraA02t08341Z' => 'bra', 'BraA03t10936Z' => 'bra', 'BraA03t15657Z' => 'bra', 'BraA04t18100Z' => 'bra', 'BraA05t20523Z' => 'bra', 'BraA06t23353Z' => 'bra', 'BraA06t27473Z' => 'bra', 'BraA06t27769Z' => 'bra', 'BraA07t28928Z' => 'bra', 'BraA08t32236Z' => 'bra', 'BraA08t32841Z' => 'bra', 'BraA08t34524Z' => 'bra', 'BraA09t38742Z' => 'bra', 'BraA09t39295Z' => 'bra', 'C02p47180' => 'bna', 'C02p50990' => 'bna', 'C03p19360' => 'bna', 'C03p74950' => 'bna', 'C03p91000' => 'bna', 'C04p63260' => 'bna', 'C05p27050' => 'bna', 'C06p08750' => 'bna', 'C06p11490' => 'bna', 'C07p02820' => 'bna', 'C07p17180' => 'bna', 'C07p29440' => 'bna', 'C07p63730' => 'bna', 'C09p39260' => 'bna', 'CAN.G1164.34' => 'can', 'CAN.G1164.39' => 'can', 'CAN.G1530.3' => 'can', 'CAN.G162.61' => 'can', 'CAN.G176.6' => 'can', 'CAN.G289.49' => 'can', 'CAN.G370.21' => 'can', 'CAN.G370.22' => 'can', 'CAN.G371.117' => 'can', 'CAN.G58.37' => 'can', 'CAN.G588.98' => 'can', 'CANSAT21G2266' => 'cansat', 'CANSAT25G2799' => 'cansat', 'CANSAT35G0862' => 'cansat', 'CANSAT35G1704' => 'cansat', 'CANSAT35G1760' => 'cansat', 'CANSAT56G3971' => 'cansat', 'CANSAT56G4116' => 'cansat', 'CANSAT80G1259' => 'cansat', 'CARHR027730' => 'chi', 'CARHR033880' => 'chi', 'CARHR043270' => 'chi', 'CARHR145330' => 'chi', 'CARHR145340' => 'chi', 'CARHR175570' => 'chi', 'CARHR181570' => 'chi', 'CARHR258470' => 'chi', 'CARHR260490' => 'chi', 'CARHR294220' => 'chi', 'Carub.0001s2668' => 'cru', 'Carub.0001s3257' => 'cru', 'Carub.0001s4220' => 'cru', 'Carub.0005s0179' => 'cru', 'Carub.0006s2807' => 'cru', 'Carub.0007s0039' => 'cru', 'Carub.0008s0169' => 'cru', 'Carub.0008s0636' => 'cru', 'Ca_00338_v3' => 'car', 'Ca_00542_v3' => 'car', 'Ca_01844_v3' => 'car', 'Ca_10611_v3' => 'car', 'Ca_13326_v3' => 'car', 'Ca_17944_v3' => 'car', 'Ca_18546_v3' => 'car', 'Ca_24219_v3' => 'car', 'Ca_29972_v3' => 'car', 'CBR_g3681' => 'cbr', 'CBR_g40021' => 'cbr', 'Cc01_g08140' => 'ccan', 'Cc02_g13410' => 'ccan', 'Cc02_g37480' => 'ccan', 'Cc05_g12030' => 'ccan', 'Cc09_g03370' => 'ccan', 'Cc09_g10300' => 'ccan', 'Cc10_g03530' => 'ccan', 'Cc10_g11380' => 'ccan', 'CDE01G0176' => 'cde', 'CDE02G0675' => 'cde', 'CDE02G0942' => 'cde', 'CDE02G1153' => 'cde', 'CDE02G4177' => 'cde', 'CDE04G2117' => 'cde', 'CDE04G2736' => 'cde', 'CDE08G1161' => 'cde', 'CDE09G1238' => 'cde', 'Cfa000467' => 'cfa', 'Cfa000947' => 'cfa', 'Cfa004969' => 'cfa', 'Cfa005284' => 'cfa', 'Cfa008993' => 'cfa', 'Cfa018187' => 'cfa', 'Cfa018454' => 'cfa', 'Cfa020585' => 'cfa', 'Ciclev10000424m.g' => 'ccl', 'Ciclev10003605m.g' => 'ccl', 'Ciclev10007828m.g' => 'ccl', 'Ciclev10014620m.g' => 'ccl', 'Ciclev10015169m.g' => 'ccl', 'Ciclev10018291m.g' => 'ccl', 'Ciclev10028256m.g' => 'ccl', 'Ciclev10033822m.g' => 'ccl', 'CiPaw.05G060300' => 'cil', 'CiPaw.05G085000' => 'cil', 'CiPaw.06G083700' => 'cil', 'CiPaw.06G120300' => 'cil', 'CiPaw.09G060500' => 'cil', 'CiPaw.09G123800' => 'cil', 'CiPaw.11G169700' => 'cil', 'CiPaw.12G118300' => 'cil', 'CiPaw.15G071000' => 'cil', 'CiPaw.15G081900' => 'cil', 'ClCG01G024610' => 'cla', 'ClCG03G006070' => 'cla', 'ClCG05G019250' => 'cla', 'ClCG09G009500' => 'cla', 'ClCG11G008200' => 'cla', 'ClCG11G018080' => 'cla', 'COL.COLO4_17373' => 'col', 'COL.COLO4_22994' => 'col', 'COL.COLO4_26389' => 'col', 'COL.COLO4_27170' => 'col', 'COL.COLO4_31074' => 'col', 'COL.COLO4_31465' => 'col', 'COL.COLO4_36438' => 'col', 'COL.COLO4_36439' => 'col', 'Cpa.g.c38781' => 'cpa', 'Cpa.g.sc128.12' => 'cpa', 'Cpa.g.sc166.7' => 'cpa', 'Cpa.g.sc166.8' => 'cpa', 'Cpa.g.sc20.111' => 'cpa', 'Cpa.g.sc27.31' => 'cpa', 'Cpa.g.sc64.36' => 'cpa', 'Cpa.g.sc64.37' => 'cpa', 'Cpa.g.sc66.49' => 'cpa', 'Cpa.g.sc80.64' => 'cpa', 'CsaV3_1G012320' => 'csa', 'CsaV3_2G008480' => 'csa', 'CsaV3_2G033450' => 'csa', 'CsaV3_3G044830' => 'csa', 'CsaV3_4G033710' => 'csa', 'CsaV3_6G051730' => 'csa', 'CsaV3_7G025350' => 'csa', 'CSS0001067' => 'camsi', 'CSS0005996' => 'camsi', 'CSS0006590' => 'camsi', 'CSS0009673' => 'camsi', 'CSS0010201' => 'camsi', 'CSS0010549' => 'camsi', 'CSS0011364' => 'camsi', 'CSS0014473' => 'camsi', 'CSS0014961' => 'camsi', 'CSS0020191' => 'camsi', 'CSS0021165' => 'camsi', 'CSS0022306' => 'camsi', 'CSS0030591' => 'camsi', 'CSS0030696' => 'camsi', 'CSS0032653' => 'camsi', 'CSS0037487' => 'camsi', 'CSS0041102' => 'camsi', 'CSS0041261' => 'camsi', 'CSS0046246' => 'camsi', 'CSS0049256' => 'camsi', 'DCAR_004075' => 'dca', 'DCAR_011538' => 'dca', 'DCAR_019553' => 'dca', 'DCAR_020952' => 'dca', 'DCAR_021739' => 'dca', 'DCAR_027407' => 'dca', 'DCAR_027913' => 'dca', 'DCAR_028066' => 'dca', 'Dinv05899' => 'din', 'Dinv07563' => 'din', 'Dinv08010' => 'din', 'Dinv14125' => 'din', 'Dinv20172' => 'din', 'Dinv30743' => 'din', 'Dinv31229' => 'din', 'Dinv34162' => 'din', 'Dinv36028' => 'din', 'Dinv39368' => 'din', 'Dinv40565' => 'din', 'Dinv41706' => 'din', 'Duzib052G0089' => 'dzi', 'Duzib116G0641' => 'dzi', 'Duzib132G0069' => 'dzi', 'Duzib132G1219' => 'dzi', 'Duzib147G0278' => 'dzi', 'Duzib160G0480' => 'dzi', 'Duzib170G0661' => 'dzi', 'Duzib177G0591' => 'dzi', 'Duzib187G1353' => 'dzi', 'Duzib192G0858' => 'dzi', 'Duzib192G0883' => 'dzi', 'Duzib213G0506' => 'dzi', 'Duzib235G0289' => 'dzi', 'Duzib251G0422' => 'dzi', 'ECA232G3898' => 'eca', 'ECA233G5950' => 'eca', 'ECA234G1699' => 'eca', 'ECA234G2421' => 'eca', 'ECA236G0426' => 'eca', 'ECA236G4331' => 'eca', 'ECA248G2573' => 'eca', 'EL10Ac1g00077' => 'bvu', 'EL10Ac1g01746' => 'bvu', 'EL10Ac2g03464' => 'bvu', 'EL10Ac4g08176' => 'bvu', 'EL10Ac7g17521' => 'bvu', 'EL10Ac8g20386' => 'bvu', 'EL10Ac9g21343' => 'bvu', 'EL10Ac9g22688' => 'bvu', 'Eucgr.B03434' => 'egr', 'Eucgr.D00618' => 'egr', 'Eucgr.E02395' => 'egr', 'Eucgr.F01129' => 'egr', 'Eucgr.F02622' => 'egr', 'Eucgr.F04207' => 'egr', 'FAN01G0570' => 'fan', 'FAN03G3351' => 'fan', 'FAN06G3702' => 'fan', 'FAN07G2149' => 'fan', 'FAN10G3758' => 'fan', 'FAN11G1170' => 'fan', 'FAN11G2050' => 'fan', 'FAN11G2724' => 'fan', 'FAN12G1700' => 'fan', 'FAN12G2028' => 'fan', 'FAN15G1160' => 'fan', 'FAN15G3063' => 'fan', 'FAN16G2540' => 'fan', 'FAN16G3077' => 'fan', 'FAN16G3624' => 'fan', 'FAN17G0221' => 'fan', 'FAN20G2492' => 'fan', 'FAN20G2905' => 'fan', 'FAN21G0548' => 'fan', 'FAN21G1300' => 'fan', 'FAN22G0077' => 'fan', 'FAN22G1315' => 'fan', 'FAN24G1280' => 'fan', 'FAN24G1445' => 'fan', 'FAN24G3527' => 'fan', 'FAN25G0464' => 'fan', 'FAN25G2885' => 'fan', 'FAN25G3270' => 'fan', 'FAN27G1101' => 'fan', 'FAN27G2846' => 'fan', 'FAN27G3524' => 'fan', 'FvH4_2g11770' => 'fve', 'FvH4_2g15630' => 'fve', 'FvH4_3g05570' => 'fve', 'FvH4_3g09110' => 'fve', 'FvH4_3g19940' => 'fve', 'FvH4_4g04821' => 'fve', 'FvH4_4g31480' => 'fve', 'FvH4_7g01740' => 'fve', 'Glyma.05G130400' => 'gma', 'Glyma.05G156400' => 'gma', 'Glyma.07G197000' => 'gma', 'Glyma.08G085151' => 'gma', 'Glyma.08G114500' => 'gma', 'Glyma.08G300400' => 'gma', 'Glyma.10G215800' => 'gma', 'Glyma.12G224400' => 'gma', 'Glyma.13G179300' => 'gma', 'Glyma.13G218151' => 'gma', 'Glyma.13G238800' => 'gma', 'Glyma.13G276900' => 'gma', 'Glyma.14G078200' => 'gma', 'Glyma.15G074500' => 'gma', 'Glyma.15G094100' => 'gma', 'Glyma.17G247200' => 'gma', 'Glyma.18G120100' => 'gma', 'Glyma.20G176000' => 'gma', 'Gohir.A01G063600' => 'ghi', 'Gohir.A01G170301' => 'ghi', 'Gohir.A02G060500' => 'ghi', 'Gohir.A05G133850' => 'ghi', 'Gohir.A05G161400' => 'ghi', 'Gohir.A06G012900' => 'ghi', 'Gohir.A06G035901' => 'ghi', 'Gohir.A06G127100' => 'ghi', 'Gohir.A06G210500' => 'ghi', 'Gohir.A08G008650' => 'ghi', 'Gohir.A09G072700' => 'ghi', 'Gohir.A09G088301' => 'ghi', 'Gohir.A10G040600' => 'ghi', 'Gohir.A12G036300' => 'ghi', 'Gohir.A12G143350' => 'ghi', 'Gohir.A12G165500' => 'ghi', 'Gohir.A13G145700' => 'ghi', 'Gohir.D01G050000' => 'ghi', 'Gohir.D01G051366' => 'ghi', 'Gohir.D01G161350' => 'ghi', 'Gohir.D02G065900' => 'ghi', 'Gohir.D05G164200' => 'ghi', 'Gohir.D05G355500' => 'ghi', 'Gohir.D06G010400' => 'ghi', 'Gohir.D06G111250' => 'ghi', 'Gohir.D06G132000' => 'ghi', 'Gohir.D06G210500' => 'ghi', 'Gohir.D07G165675' => 'ghi', 'Gohir.D08G062240' => 'ghi', 'Gohir.D08G086101' => 'ghi', 'Gohir.D08G138060' => 'ghi', 'Gohir.D09G072300' => 'ghi', 'Gohir.D10G041400' => 'ghi', 'Gohir.D11G191020' => 'ghi', 'Gohir.D11G212066' => 'ghi', 'Gohir.D12G036300' => 'ghi', 'Gohir.D12G168600' => 'ghi', 'Gohir.D13G150600' => 'ghi', 'Gorai.001G057300' => 'gra', 'Gorai.002G069900' => 'gra', 'Gorai.002G200000' => 'gra', 'Gorai.003G067600' => 'gra', 'Gorai.005G074800' => 'gra', 'Gorai.006G087300' => 'gra', 'Gorai.008G037500' => 'gra', 'Gorai.008G181400' => 'gra', 'Gorai.009G169400' => 'gra', 'Gorai.009G387900' => 'gra', 'Gorai.010G013300' => 'gra', 'Gorai.010G153800' => 'gra', 'Gorai.010G255800' => 'gra', 'Gorai.011G043700' => 'gra', 'Gorai.011G198900' => 'gra', 'Gorai.013G168400' => 'gra', 'GSVIVG01005212001' => 'vvi', 'GSVIVG01006163001' => 'vvi', 'GSVIVG01009625001' => 'vvi', 'GSVIVG01014338001' => 'vvi', 'GSVIVG01020005001' => 'vvi', 'GSVIVG01021450001' => 'vvi', 'GSVIVG01023975001' => 'vvi', 'GSVIVG01034490001' => 'vvi', 'HanXRQChr04g0112071' => 'han', 'HanXRQChr05g0131151' => 'han', 'HanXRQChr09g0262371' => 'han', 'HanXRQChr09g0268401' => 'han', 'HanXRQChr10g0279241' => 'han', 'HanXRQChr10g0297961' => 'han', 'HanXRQChr11g0326231' => 'han', 'HanXRQChr11g0328471' => 'han', 'HanXRQChr16g0507941' => 'han', 'HanXRQChr17g0560211' => 'han', 'Haze_02108' => 'cav', 'Haze_02428' => 'cav', 'Haze_05593' => 'cav', 'Haze_06448' => 'cav', 'Haze_09427' => 'cav', 'Haze_12022' => 'cav', 'Haze_17612' => 'cav', 'Haze_17928' => 'cav', 'Hma1.2p1_0032F.1_g019250' => 'hma', 'Hma1.2p1_0163F.1_g072690' => 'hma', 'Hma1.2p1_0265F.1_g106710' => 'hma', 'Hma1.2p1_0286F.1_g113970' => 'hma', 'Hma1.2p1_0363F.1_g136640' => 'hma', 'Hma1.2p1_0584F.1_g183470' => 'hma', 'Hma1.2p1_0885F.1_g232570' => 'hma', 'HPP92_006022' => 'vpl', 'HPP92_007320' => 'vpl', 'HPP92_011521' => 'vpl', 'HPP92_019387' => 'vpl', 'HPP92_024038' => 'vpl', 'Hund05891' => 'sun', 'Hund06450' => 'sun', 'Hund12053' => 'sun', 'Hund16800' => 'sun', 'Hund21222' => 'sun', 'Hund22896' => 'sun', 'Hund23746' => 'sun', 'Hund27083' => 'sun', 'Lalb_Chr02g0141831' => 'lal', 'Lalb_Chr02g0141841' => 'lal', 'Lalb_Chr05g0220411' => 'lal', 'Lalb_Chr06g0162081' => 'lal', 'Lalb_Chr09g0327651' => 'lal', 'Lalb_Chr13g0295051' => 'lal', 'Lalb_Chr15g0086801' => 'lal', 'Lalb_Chr16g0383781' => 'lal', 'Lalb_Chr16g0383791' => 'lal', 'Lalb_Chr18g0055441' => 'lal', 'Lalb_Chr18g0059611' => 'lal', 'Lalb_Chr20g0109661' => 'lal', 'Lalb_Chr20g0109831' => 'lal', 'Lalb_Chr20g0121871' => 'lal', 'Lalb_Chr22g0355361' => 'lal', 'Lalb_Chr25g0286371' => 'lal', 'Lj1A1187G43' => 'lonja', 'Lj1A1205T50' => 'lonja', 'Lj1A800G33' => 'lonja', 'Lj1C1187T7' => 'lonja', 'Lj1C843T11' => 'lonja', 'Lj1g0010940' => 'lja', 'Lj2A288T69' => 'lonja', 'Lj3g0024276' => 'lja', 'Lj4A47T76' => 'lonja', 'Lj4g0005805' => 'lja', 'Lj4g0006097' => 'lja', 'Lj4g0008528' => 'lja', 'Lj4g0024907' => 'lja', 'Lj5g0012472' => 'lja', 'Lj5g0018648' => 'lja', 'Lj6C789G1' => 'lonja', 'Lj6g0004000' => 'lja', 'Lj7A292G67' => 'lonja', 'Lj7A292T64' => 'lonja', 'Lj9A400T58' => 'lonja', 'Lsat_1_v5_gn_1_126181' => 'lsa', 'Lsat_1_v5_gn_4_123041' => 'lsa', 'Lsat_1_v5_gn_4_133620' => 'lsa', 'Lsat_1_v5_gn_4_53221' => 'lsa', 'Lsat_1_v5_gn_4_71961' => 'lsa', 'Lsat_1_v5_gn_7_105241' => 'lsa', 'Lsat_1_v5_gn_7_21361' => 'lsa', 'Lsat_1_v5_gn_7_28860' => 'lsa', 'Lsat_1_v5_gn_7_31260' => 'lsa', 'Lsat_1_v5_gn_8_52801' => 'lsa', 'Manes.02G191400' => 'mes', 'Manes.03G110100' => 'mes', 'Manes.04G071100' => 'mes', 'Manes.05G100500' => 'mes', 'Manes.05G164700' => 'mes', 'Manes.15G087000' => 'mes', 'Manes.15G121500' => 'mes', 'Manes.16G028300' => 'mes', 'Manes.17G046100' => 'mes', 'Manes.17G069800' => 'mes', 'Manes.18G100500' => 'mes', 'Mapoly0002s0109' => 'mpo', 'Mapoly0024s0007' => 'mpo', 'Mapoly0089s0032' => 'mpo', 'MBI04_g42241_MAGBIO' => 'mbi', 'MBI05_g11988_MAGBIO' => 'mbi', 'MBI05_g35452_MAGBIO' => 'mbi', 'MBI07_g30179_MAGBIO' => 'mbi', 'MBI07_g35859_MAGBIO' => 'mbi', 'MBI07_g35860_MAGBIO' => 'mbi', 'MBI07_g37166_MAGBIO' => 'mbi', 'MBI08_g18172_MAGBIO' => 'mbi', 'MBI09_g08441_MAGBIO' => 'mbi', 'MBI13_g01676_MAGBIO' => 'mbi', 'MBI14_g42955_MAGBIO' => 'mbi', 'MBI16_g13161_MAGBIO' => 'mbi', 'MBI17_g27204_MAGBIO' => 'mbi', 'MBI19_g21595_MAGBIO' => 'mbi', 'MD00G1148400' => 'mdo', 'MD02G1301200' => 'mdo', 'MD03G1227800' => 'mdo', 'MD05G1041100' => 'mdo', 'MD05G1124800' => 'mdo', 'MD05G1284000' => 'mdo', 'MD05G1338800' => 'mdo', 'MD05G1338900' => 'mdo', 'MD07G1022800' => 'mdo', 'MD10G1047500' => 'mdo', 'MD10G1127500' => 'mdo', 'MD10G1262300' => 'mdo', 'MD10G1293800' => 'mdo', 'MD16G1074300' => 'mdo', 'Medtr1g021670' => 'mtr', 'Medtr1g096320' => 'mtr', 'Medtr2g013690' => 'mtr', 'Medtr2g019450' => 'mtr', 'Medtr2g085170' => 'mtr', 'Medtr4g088785' => 'mtr', 'Medtr8g055930' => 'mtr', 'Medtr8g085850' => 'mtr', 'MELO3C002605.2' => 'cme', 'MELO3C003891.2' => 'cme', 'MELO3C004012.2' => 'cme', 'MELO3C007134.2' => 'cme', 'MELO3C008118.2' => 'cme', 'MELO3C016700.2' => 'cme', 'MELO3C024127.2' => 'cme', 'MELO3C033361.2' => 'cme', 'MELO3C033362.2' => 'cme', 'Migut.C00430' => 'egut', 'Migut.C01246' => 'egut', 'Migut.E00101' => 'egut', 'Migut.H01486' => 'egut', 'Migut.H01939' => 'egut', 'Migut.K00360' => 'egut', 'Migut.M00910' => 'egut', 'Migut.M01139' => 'egut', 'Migut.N02677' => 'egut', 'MSTRG.13252' => 'ama', 'MSTRG.14701' => 'ama', 'MSTRG.1521' => 'ama', 'MSTRG.15884' => 'ama', 'MSTRG.16242' => 'ama', 'MSTRG.22285' => 'ama', 'MSTRG.22444' => 'ama', 'MSTRG.2349' => 'ama', 'MSTRG.26308' => 'ama', 'MSTRG.28296' => 'ama', 'MSTRG.9895' => 'ama', 'Nitab4.5_0000110g0060' => 'nta', 'Nitab4.5_0000420g0130' => 'nta', 'Nitab4.5_0000422g0030' => 'nta', 'Nitab4.5_0000560g0180' => 'nta', 'Nitab4.5_0000703g0100' => 'nta', 'Nitab4.5_0000786g0200' => 'nta', 'Nitab4.5_0001336g0020' => 'nta', 'Nitab4.5_0001796g0030' => 'nta', 'Nitab4.5_0003348g0060' => 'nta', 'Nitab4.5_0003698g0040' => 'nta', 'Nitab4.5_0003942g0090' => 'nta', 'Nitab4.5_0004775g0070' => 'nta', 'Nitab4.5_0004864g0030' => 'nta', 'Nitab4.5_0005615g0020' => 'nta', 'Nitab4.5_0009288g0030' => 'nta', 'Nitab4.5_0009341g0010' => 'nta', 'Nitab4.5_0009535g0010' => 'nta', 'Nn1g03995' => 'nnu', 'Nn1g04100' => 'nnu', 'Nn1g06530' => 'nnu', 'Nn3g16404' => 'nnu', 'Nn3g17212' => 'nnu', 'Nn3g20776' => 'nnu', 'Nn3g21923' => 'nnu', 'Nn5g27737' => 'nnu', 'Nn5g29461' => 'nnu', 'Nn7g38355' => 'nnu', 'Nn8g39873' => 'nnu', 'Oeu000548.2' => 'oeu', 'Oeu004672.1' => 'oeu', 'Oeu015605.2' => 'oeu', 'Oeu016092.1' => 'oeu', 'Oeu017879.3' => 'oeu', 'Oeu024910.1' => 'oeu', 'Oeu028965.1' => 'oeu', 'Oeu031269.1' => 'oeu', 'Oeu031270.1' => 'oeu', 'Oeu032535.1' => 'oeu', 'Oeu034151.1' => 'oeu', 'Oeu034152.1' => 'oeu', 'Oeu034588.2' => 'oeu', 'Oeu050846.1' => 'oeu', 'Oeu050849.2' => 'oeu', 'Oeu051063.2' => 'oeu', 'Oeu052368.1' => 'oeu', 'Oeu052370.1' => 'oeu', 'Os01g0210400' => 'osa', 'Os01g0304300' => 'osa', 'Os01g0749100' => 'osa', 'Os02g0745800' => 'osa', 'Os03g0769050' => 'osa', 'Os05g0531500' => 'osa', 'Os06g0724300' => 'osa', 'Os11g0198100' => 'osa', 'Peaxi162Scf00069g01425' => 'pax', 'Peaxi162Scf00280g00811' => 'pax', 'Peaxi162Scf00310g00615' => 'pax', 'Peaxi162Scf00362g00542' => 'pax', 'Peaxi162Scf00461g00310' => 'pax', 'Peaxi162Scf00530g00118' => 'pax', 'Peaxi162Scf00541g00057' => 'pax', 'Peaxi162Scf00661g00017' => 'pax', 'Peaxi162Scf00926g00027' => 'pax', 'Peaxi162Scf01064g00263' => 'pax', 'Peaxi162Scf01211g00135' => 'pax', 'PGR004G2336' => 'pgr', 'PGR042G0327' => 'pgr', 'PGR042G1957' => 'pgr', 'PGR042G2003' => 'pgr', 'PGR042G3929' => 'pgr', 'PGR083G1137' => 'pgr', 'PGR083G1364' => 'pgr', 'PGSC0003DMG400003381' => 'stu', 'PGSC0003DMG400003417' => 'stu', 'PGSC0003DMG400008981' => 'stu', 'PGSC0003DMG400012417' => 'stu', 'PGSC0003DMG400012823' => 'stu', 'PGSC0003DMG400016885' => 'stu', 'PGSC0003DMG400022812' => 'stu', 'PGSC0003DMG400029726' => 'stu', 'PGSC0003DMG401009243' => 'stu', 'PGSC0003DMG401031505' => 'stu', 'PGSC0003DMG402031505' => 'stu', 'Phvul.001G017600' => 'pvu', 'Phvul.002G193500' => 'pvu', 'Phvul.002G228900' => 'pvu', 'Phvul.002G236800' => 'pvu', 'Phvul.003G049500' => 'pvu', 'Phvul.005G072000' => 'pvu', 'Phvul.006G164800' => 'pvu', 'Phvul.006G185100' => 'pvu', 'Phvul.007G090000' => 'pvu', 'Potri.001G399800' => 'ptr', 'Potri.002G149900' => 'ptr', 'Potri.004G044100' => 'ptr', 'Potri.004G177600' => 'ptr', 'Potri.009G138000' => 'ptr', 'Potri.010G094000' => 'ptr', 'Potri.011G053000' => 'ptr', 'Potri.011G119300' => 'ptr', 'Potri.013G113700' => 'ptr', 'Potri.018G107800' => 'ptr', 'Potri.019G084100' => 'ptr', 'Pp3c14_23720' => 'ppa', 'Pp3c16_6340' => 'ppa', 'Pp3c23_13420' => 'ppa', 'Pp3c24_2740' => 'ppa', 'Pp3c25_860' => 'ppa', 'Pp3c8_21750' => 'ppa', 'Prupe.1G273000' => 'ppe', 'Prupe.1G273700' => 'ppe', 'Prupe.1G274100' => 'ppe', 'Prupe.2G023300' => 'ppe', 'Prupe.4G048000' => 'ppe', 'Prupe.4G080400' => 'ppe', 'Prupe.4G181200' => 'ppe', 'Prupe.8G056900' => 'ppe', 'Prupe.8G168700' => 'ppe', 'Psat1g189080' => 'psa', 'Psat1g204760' => 'psa', 'Psat4g175560' => 'psa', 'Psat4g177720' => 'psa', 'Psat5g244240' => 'psa', 'Psat6g010720' => 'psa', 'Psat6g187200' => 'psa', 'Psat7g072040' => 'psa', 'PSO017G3501' => 'pso', 'PSO063G2148' => 'pso', 'PSO063G5608' => 'pso', 'PSO210G6392' => 'pso', 'PSO541G2319' => 'pso', 'PSO541G2836' => 'pso', 'PSO541G4012' => 'pso', 'PSO541G6253' => 'pso', 'PSO675G0580' => 'pso', 'PSO675G0856' => 'pso', 'PSO675G5635' => 'pso', 'PSO675G9157' => 'pso', 'PSO832G1660' => 'pso', 'PSO832G1969' => 'pso', 'QL02p007186' => 'qlo', 'QL02p033904' => 'qlo', 'QL03p064391' => 'qlo', 'QL05p040593' => 'qlo', 'QL05p058242' => 'qlo', 'QL08p021825' => 'qlo', 'QL11p004981' => 'qlo', 'RcHm_v2.0_Chr1g0318301' => 'rch', 'RcHm_v2.0_Chr4g0418501' => 'rch', 'RcHm_v2.0_Chr4g0439971' => 'rch', 'RcHm_v2.0_Chr5g0008541' => 'rch', 'RcHm_v2.0_Chr5g0014101' => 'rch', 'RcHm_v2.0_Chr5g0014131' => 'rch', 'RcHm_v2.0_Chr5g0033621' => 'rch', 'RcHm_v2.0_Chr6g0272041' => 'rch', 'RcHm_v2.0_Chr6g0278831' => 'rch', 'Rhsim02G0130400' => 'rsi', 'Rhsim02G0171100' => 'rsi', 'Rhsim05G0053000' => 'rsi', 'Rhsim05G0053100' => 'rsi', 'Rhsim06G0096500' => 'rsi', 'Rhsim06G0096600' => 'rsi', 'Rhsim06G0199100' => 'rsi', 'Rhsim12G0062300' => 'rsi', 'Rhsim12G0062800' => 'rsi', 'Sabra02G0118600' => 'sbr', 'Sabra04G0027300' => 'sbr', 'Sabra04G0119500' => 'sbr', 'Sabra08G0112500' => 'sbr', 'Sabra11G0036800' => 'sbr', 'Sabra11G0103800' => 'sbr', 'Sabra13G0096300' => 'sbr', 'Sabra16G0262300' => 'sbr', 'Sabra18G0091700' => 'sbr', 'Sabra19G0095400' => 'sbr', 'SalBow6G3080' => 'sbo', 'SalBow7G1157' => 'sbo', 'SalBow7G2123' => 'sbo', 'SalBow7G2285' => 'sbo', 'SalBow7G3537' => 'sbo', 'SalBow8G2947' => 'sbo', 'SalBow8G4463' => 'sbo', 'SalBow8G5466' => 'sbo', 'Sc01g0001750' => 'sci', 'Sc02g0006640' => 'sci', 'Sc02g0006670' => 'sci', 'Sc04g0008220' => 'sci', 'Sc05g0006190' => 'sci', 'Sc08g0002760' => 'sci', 'Sc17g0006170' => 'sci', 'Sc22g0002050' => 'sci', 'Sc23g0001190' => 'sci', 'Sc24g0000980' => 'sci', 'Sed0006245' => 'sed', 'Sed0007543' => 'sed', 'Sed0009411' => 'sed', 'Sed0010765' => 'sed', 'Sed0012944' => 'sed', 'Sed0014682' => 'sed', 'Sed0016174' => 'sed', 'Sed0016796' => 'sed', 'Sed0020317' => 'sed', 'Sed0021467' => 'sed', 'SEGI_01316' => 'sgi', 'SEGI_03374' => 'sgi', 'SEGI_16265' => 'sgi', 'SEGI_18569' => 'sgi', 'SEGI_20351' => 'sgi', 'SEGI_26395' => 'sgi', 'SEGI_29469' => 'sgi', 'SEGI_34771' => 'sgi', 'SEGI_36769' => 'sgi', 'SEGI_37139' => 'sgi', 'SGA_v2.0_scaffold100G29687' => 'sas', 'SGA_v2.0_scaffold118G32472' => 'sas', 'SGA_v2.0_scaffold14G07051' => 'sas', 'SGA_v2.0_scaffold183G39845' => 'sas', 'SGA_v2.0_scaffold1G00174' => 'sas', 'SGA_v2.0_scaffold22G09714' => 'sas', 'SGA_v2.0_scaffold333G48992' => 'sas', 'SGA_v2.0_scaffold46G17491' => 'sas', 'SGA_v2.0_scaffold49G18294' => 'sas', 'SGA_v2.0_scaffold63G21658' => 'sas', 'SHI01741' => 'shi', 'SHI05771' => 'shi', 'SHI18077' => 'shi', 'SHI20525' => 'shi', 'SHI20527' => 'shi', 'SHI20528' => 'shi', 'SMO172G0185' => 'smo', 'SMO198G0020' => 'smo', 'SMO351G0006' => 'smo', 'SMO356G0118' => 'smo', 'SMO358G0296' => 'smo', 'SMO367G0079' => 'smo', 'SMO367G1277' => 'smo', 'Solyc01g014220.3' => 'sly', 'Solyc01g111770.2' => 'sly', 'Solyc02g078180.3' => 'sly', 'Solyc03g006430.3' => 'sly', 'Solyc03g006456.1' => 'sly', 'Solyc03g079860.2' => 'sly', 'Solyc04g079770.3' => 'sly', 'Solyc05g007430.4' => 'sly', 'Solyc07g063150.3' => 'sly', 'Solyc08g016620.3' => 'sly', 'Solyc09g057590.3' => 'sly', 'Solyc09g057600.1' => 'sly', 'Solyc10g009050.3' => 'sly', 'Solyc11g017420.2' => 'sly', 'Sopen01g053810' => 'spe', 'Sopen02g023040' => 'spe', 'Sopen03g002440' => 'spe', 'Sopen04g033350' => 'spe', 'Sopen05g003310' => 'spe', 'Sopen07g004050' => 'spe', 'Sopen07g031340' => 'spe', 'Sopen08g006990' => 'spe', 'Sopen10g004830' => 'spe', 'Sopen11g009370' => 'spe', 'Sp1g24450' => 'spa', 'Sp1g29670' => 'spa', 'Sp1g39600' => 'spa', 'Sp2g11080' => 'spa', 'Sp2g13970' => 'spa', 'Sp4g16130' => 'spa', 'Sp6g13080' => 'spa', 'Sp7g37270' => 'spa', 'TAR371G0065' => 'tar', 'TAR376G0340' => 'tar', 'TAR376G0435' => 'tar', 'TAR381G0002' => 'tar', 'TAR381G1236' => 'tar', 'TAR624G0055' => 'tar', 'TAR624G0324' => 'tar', 'TAR624G0696' => 'tar', 'TAR624G0906' => 'tar', 'TAR625G0107' => 'tar', 'TAR626G0015' => 'tar', 'TAR626G1356' => 'tar', 'TAR627G0888' => 'tar', 'TAR628G0399' => 'tar', 'TAR628G1327' => 'tar', 'TAR629G2831' => 'tar', 'TAR629G2874' => 'tar', 'TAR633G1432' => 'tar', 'TAR633G2771' => 'tar', 'THA.LOC104803394' => 'tha', 'THA.LOC104805153' => 'tha', 'THA.LOC104806784' => 'tha', 'THA.LOC104810473' => 'tha', 'THA.LOC104813100' => 'tha', 'THA.LOC104814215' => 'tha', 'THA.LOC104815554' => 'tha', 'THA.LOC104820544' => 'tha', 'THA.LOC104824754' => 'tha', 'THA.LOC104827717' => 'tha', 'Thecc.02G031400' => 'tca', 'Thecc.02G055900' => 'tca', 'Thecc.02G350800' => 'tca', 'Thecc.06G150900' => 'tca', 'Thecc.06G186600' => 'tca', 'Thecc.07G089600' => 'tca', 'Thecc.08G020400' => 'tca', 'Thecc.08G182100' => 'tca', 'Thhalv10000873m.g' => 'esa', 'Thhalv10004185m.g' => 'esa', 'Thhalv10006981m.g' => 'esa', 'Thhalv10007204m.g' => 'esa', 'Thhalv10011374m.g' => 'esa', 'Thhalv10013482m.g' => 'esa', 'Thhalv10017801m.g' => 'esa', 'Thhalv10024983m.g' => 'esa', 'TPR.G12072' => 'tpr', 'TPR.G15769' => 'tpr', 'TPR.G16504' => 'tpr', 'TPR.G16506' => 'tpr', 'TPR.G24345' => 'tpr', 'TPR.G26666' => 'tpr', 'TPR.G27320' => 'tpr', 'TPR.G31819' => 'tpr', 'TPR.G38879' => 'tpr', 'TPR.G39015' => 'tpr', 'TPR.G8819' => 'tpr', 'TWI09G0924' => 'twi', 'TWI12G0811' => 'twi', 'TWI12G1294' => 'twi', 'TWI31G0150' => 'twi', 'TWI36G1262' => 'twi', 'TWI38G1287' => 'twi', 'TWI38G1633' => 'twi', 'TWI38G1982' => 'twi', 'TWI39G0116' => 'twi', 'TWI60G1011' => 'twi', 'TWI63G0171' => 'twi', 'TWI73G0839' => 'twi', 'TWI79G1511' => 'twi', 'unitig_0.g915' => 'ugi', 'unitig_0.g916' => 'ugi', 'unitig_21.g20219' => 'ugi', 'unitig_21.g20416' => 'ugi', 'unitig_578.g16132' => 'ugi', 'unitig_578.g16718' => 'ugi', 'unitig_62.g23481' => 'ugi', 'unitig_744.g24535' => 'ugi', 'unitig_749.g13525' => 'ugi', 'vmacro01248' => 'vma', 'vmacro02290' => 'vma', 'vmacro10946' => 'vma', 'vmacro11865' => 'vma', 'vmacro12493' => 'vma', 'vmacro17322' => 'vma', 'vmacro21599' => 'vma', 'vmacro23041' => 'vma', 'VMungo0251G0004' => 'vmu', 'VMungo0251G2639' => 'vmu', 'VMungo0251G2967' => 'vmu', 'VMungo0540G0864' => 'vmu', 'VMungo0540G1569' => 'vmu', 'VMungo0647G0317' => 'vmu', 'VMungo0720G1373' => 'vmu', 'VMungo0720G1508' => 'vmu', 'VMungo1080G0485' => 'vmu', 'VMungo1215G3177' => 'vmu', 'Zm00001eb112600' => 'zma', 'Zm00001eb120220' => 'zma', 'Zm00001eb153240' => 'zma', 'Zm00001eb168880' => 'zma', 'Zm00001eb213920' => 'zma', 'Zm00001eb228280' => 'zma', 'Zm00001eb254580' => 'zma', 'Zm00001eb272180' => 'zma', 'Zm00001eb293190' => 'zma', 'Zm00001eb322930' => 'zma', 'Zm00001eb353360' => 'zma', 'Zm00001eb353390' => 'zma', 'Zm00001eb353430' => 'zma', 'Zm00001eb353440' => 'zma', 'Zm00001eb353780' => 'zma' ), 'gf_id' => 'HOM05D000499', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000499' ), 'data_identifier' => 'HOM05D000499', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000499', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1066', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p29780' => 'bna', 'A02p33180' => 'bna', 'A03p16470' => 'bna', 'A03p66010' => 'bna', 'A04p25970' => 'bna', 'A06p01270' => 'bna', 'A06p46080' => 'bna', 'A07p11400' => 'bna', 'A08p01840' => 'bna', 'A08p08230' => 'bna', 'A08p25740' => 'bna', 'A09p32070' => 'bna', 'A09p37830' => 'bna', 'A09p42840' => 'bna', 'A09p42850' => 'bna', 'Aa31LG10G2060' => 'aar', 'Aa31LG2G7410' => 'aar', 'Aa31LG6G10200' => 'aar', 'Aa31LG6G16680' => 'aar', 'Aa31LG6G8470' => 'aar', 'Aa31LG9G12730' => 'aar', 'Aa31LG9G13680' => 'aar', 'Aa31LG9G14920' => 'aar', 'Aa31LG9G6650' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4977' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5467' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3254' => 'aag', 'Actinidia02578' => 'ach', 'Actinidia07693' => 'ach', 'Actinidia08413' => 'ach', 'Actinidia08414' => 'ach', 'Actinidia15289' => 'ach', 'Actinidia19871' => 'ach', 'Actinidia21475' => 'ach', 'Actinidia22576' => 'ach', 'Actinidia28327' => 'ach', 'Actinidia32491' => 'ach', 'Actinidia39463' => 'ach', 'Actinidia39571' => 'ach', 'Ah.01g013750' => 'amhyb', 'Ah.01g023210' => 'amhyb', 'Ah.04g164850' => 'amhyb', 'Ah.05g178060' => 'amhyb', 'Ah.07g204270' => 'amhyb', 'Ah.07g208480' => 'amhyb', 'Ah.09g237410' => 'amhyb', 'Ah.14g089460' => 'amhyb', 'AL1G41790' => 'aly', 'AL1G49050' => 'aly', 'AL1G53810' => 'aly', 'AL1G61400' => 'aly', 'AL4G18580' => 'aly', 'AL5G12510' => 'aly', 'AL5G12540' => 'aly', 'AL6G43230' => 'aly', 'AL7G10370' => 'aly', 'AL7G19250' => 'aly', 'AL8G12240' => 'aly', 'AL8G18540' => 'aly', 'Aqoxy1G02409' => 'aox', 'Aqoxy2G03993' => 'aox', 'Aqoxy3G03357' => 'aox', 'Aqoxy4G00785' => 'aox', 'Aqoxy5G02598' => 'aox', 'Aqoxy6G00132' => 'aox', 'Aqoxy7G01776' => 'aox', 'Aqoxy7G02316' => 'aox', 'Aqoxy7G03973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.12AFKW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B8730' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27IQR1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3F75VG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3RE0GA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41TCQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.527VTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FIR39' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5W8UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DA38EV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ63HS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H1I32C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HC27T5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4M8AP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7N3CZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9UVDZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LS1NQA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT1D4B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SKC4TM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCFV76' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF9Q1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQWD9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1ZM88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WE07RT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YCK7VH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJE6Q6' => 'arhy', 'AT1G28240' => 'ath', 'AT1G34550' => 'ath', 'AT1G53040' => 'ath', 'AT2G02910' => 'ath', 'AT4G09630' => 'ath', 'AT4G38500' => 'ath', 'AT5G42660' => 'ath', 'AT5G46220' => 'ath', 'ATR0152G026' => 'atr', 'ATR0564G343' => 'atr', 'ATR0706G151' => 'atr', 'ATR0733G207' => 'atr', 'ATR0751G234' => 'atr', 'ATR0807G048' => 'atr', 'ATR1091G084' => 'atr', 'Atru.chr10.1229' => 'acertr', 'Atru.chr10.1230' => 'acertr', 'Atru.chr10.1874' => 'acertr', 'Atru.chr11.1808' => 'acertr', 'Atru.chr13.1795' => 'acertr', 'Atru.chr13.570' => 'acertr', 'Atru.chr2.2608' => 'acertr', 'Atru.chr2.2609' => 'acertr', 'Atru.chr5.3428' => 'acertr', 'Atru.chr8.1171' => 'acertr', 'AUR62004651' => 'cqu', 'AUR62008675' => 'cqu', 'AUR62010014' => 'cqu', 'AUR62013004' => 'cqu', 'AUR62014825' => 'cqu', 'AUR62015015' => 'cqu', 'AUR62015151' => 'cqu', 'AUR62017020' => 'cqu', 'AUR62019422' => 'cqu', 'AUR62023570' => 'cqu', 'AUR62025571' => 'cqu', 'AUR62029098' => 'cqu', 'AUR62033863' => 'cqu', 'AUR62034296' => 'cqu', 'AUR62040075' => 'cqu', 'BcaB02g07334' => 'bca', 'BcaB02g10575' => 'bca', 'BcaB03g12119' => 'bca', 'BcaB03g12120' => 'bca', 'BcaB03g13945' => 'bca', 'BcaB04g17123' => 'bca', 'BcaB04g17867' => 'bca', 'BcaB04g19839' => 'bca', 'BcaB07g30317' => 'bca', 'BcaB07g32432' => 'bca', 'BcaB07g33362' => 'bca', 'BcaB08g36611' => 'bca', 'BcaC01g00028' => 'bca', 'BcaC01g01356' => 'bca', 'BcaC01g02034' => 'bca', 'BcaC01g06051' => 'bca', 'BcaC03g16839' => 'bca', 'BcaC03g17176' => 'bca', 'BcaC05g26829' => 'bca', 'BcaC06g31490' => 'bca', 'BcaC06g35344' => 'bca', 'BcaC06g36570' => 'bca', 'BcaC07g37537' => 'bca', 'BcaC08g43491' => 'bca', 'BcaC08g43773' => 'bca', 'BcaNung00234' => 'bca', 'BcaNung01982' => 'bca', 'BcaNung03707' => 'bca', 'BcaNung06454' => 'bca', 'BolC2t10762H' => 'bol', 'BolC2t11191H' => 'bol', 'BolC3t14322H' => 'bol', 'BolC3t19747H' => 'bol', 'BolC3t21425H' => 'bol', 'BolC4t27800H' => 'bol', 'BolC5t31423H' => 'bol', 'BolC6t35951H' => 'bol', 'BolC6t36282H' => 'bol', 'BolC7t40678H' => 'bol', 'BolC7t40679H' => 'bol', 'BolC7t42222H' => 'bol', 'BolC7t43492H' => 'bol', 'BolC7t46785H' => 'bol', 'BolC8t47853H' => 'bol', 'BolC9t56805H' => 'bol', 'BraA02t08000Z' => 'bra', 'BraA02t08341Z' => 'bra', 'BraA03t10936Z' => 'bra', 'BraA03t15657Z' => 'bra', 'BraA04t18100Z' => 'bra', 'BraA05t20523Z' => 'bra', 'BraA06t23353Z' => 'bra', 'BraA06t27473Z' => 'bra', 'BraA06t27769Z' => 'bra', 'BraA07t28928Z' => 'bra', 'BraA08t32236Z' => 'bra', 'BraA08t32841Z' => 'bra', 'BraA08t34524Z' => 'bra', 'BraA09t38742Z' => 'bra', 'BraA09t39295Z' => 'bra', 'C02p47180' => 'bna', 'C02p50990' => 'bna', 'C03p19360' => 'bna', 'C03p74950' => 'bna', 'C03p91000' => 'bna', 'C04p63260' => 'bna', 'C05p27050' => 'bna', 'C06p08750' => 'bna', 'C06p11490' => 'bna', 'C07p02820' => 'bna', 'C07p17180' => 'bna', 'C07p29440' => 'bna', 'C07p63730' => 'bna', 'C09p39260' => 'bna', 'CAN.G1164.34' => 'can', 'CAN.G1164.39' => 'can', 'CAN.G1530.3' => 'can', 'CAN.G162.61' => 'can', 'CAN.G176.6' => 'can', 'CAN.G289.49' => 'can', 'CAN.G370.21' => 'can', 'CAN.G370.22' => 'can', 'CAN.G371.117' => 'can', 'CAN.G58.37' => 'can', 'CAN.G588.98' => 'can', 'CANSAT21G2266' => 'cansat', 'CANSAT25G2799' => 'cansat', 'CANSAT35G0862' => 'cansat', 'CANSAT35G1704' => 'cansat', 'CANSAT35G1760' => 'cansat', 'CANSAT56G3971' => 'cansat', 'CANSAT56G4116' => 'cansat', 'CANSAT80G1259' => 'cansat', 'CARHR027730' => 'chi', 'CARHR033880' => 'chi', 'CARHR043270' => 'chi', 'CARHR145330' => 'chi', 'CARHR145340' => 'chi', 'CARHR175570' => 'chi', 'CARHR181570' => 'chi', 'CARHR258470' => 'chi', 'CARHR260490' => 'chi', 'CARHR294220' => 'chi', 'Carub.0001s2668' => 'cru', 'Carub.0001s3257' => 'cru', 'Carub.0001s4220' => 'cru', 'Carub.0005s0179' => 'cru', 'Carub.0006s2807' => 'cru', 'Carub.0007s0039' => 'cru', 'Carub.0008s0169' => 'cru', 'Carub.0008s0636' => 'cru', 'Ca_00338_v3' => 'car', 'Ca_00542_v3' => 'car', 'Ca_01844_v3' => 'car', 'Ca_10611_v3' => 'car', 'Ca_13326_v3' => 'car', 'Ca_17944_v3' => 'car', 'Ca_18546_v3' => 'car', 'Ca_24219_v3' => 'car', 'Ca_29972_v3' => 'car', 'CBR_g3681' => 'cbr', 'CBR_g40021' => 'cbr', 'Cc01_g08140' => 'ccan', 'Cc02_g13410' => 'ccan', 'Cc02_g37480' => 'ccan', 'Cc05_g12030' => 'ccan', 'Cc09_g03370' => 'ccan', 'Cc09_g10300' => 'ccan', 'Cc10_g03530' => 'ccan', 'Cc10_g11380' => 'ccan', 'CDE01G0176' => 'cde', 'CDE02G0675' => 'cde', 'CDE02G0942' => 'cde', 'CDE02G1153' => 'cde', 'CDE02G4177' => 'cde', 'CDE04G2117' => 'cde', 'CDE04G2736' => 'cde', 'CDE08G1161' => 'cde', 'CDE09G1238' => 'cde', 'Cfa000467' => 'cfa', 'Cfa000947' => 'cfa', 'Cfa004969' => 'cfa', 'Cfa005284' => 'cfa', 'Cfa008993' => 'cfa', 'Cfa018187' => 'cfa', 'Cfa018454' => 'cfa', 'Cfa020585' => 'cfa', 'Ciclev10000424m.g' => 'ccl', 'Ciclev10003605m.g' => 'ccl', 'Ciclev10007828m.g' => 'ccl', 'Ciclev10014620m.g' => 'ccl', 'Ciclev10015169m.g' => 'ccl', 'Ciclev10018291m.g' => 'ccl', 'Ciclev10028256m.g' => 'ccl', 'Ciclev10033822m.g' => 'ccl', 'CiPaw.05G060300' => 'cil', 'CiPaw.05G085000' => 'cil', 'CiPaw.06G083700' => 'cil', 'CiPaw.06G120300' => 'cil', 'CiPaw.09G060500' => 'cil', 'CiPaw.09G123800' => 'cil', 'CiPaw.11G169700' => 'cil', 'CiPaw.12G118300' => 'cil', 'CiPaw.15G071000' => 'cil', 'CiPaw.15G081900' => 'cil', 'ClCG01G024610' => 'cla', 'ClCG03G006070' => 'cla', 'ClCG05G019250' => 'cla', 'ClCG09G009500' => 'cla', 'ClCG11G008200' => 'cla', 'ClCG11G018080' => 'cla', 'COL.COLO4_17373' => 'col', 'COL.COLO4_22994' => 'col', 'COL.COLO4_26389' => 'col', 'COL.COLO4_27170' => 'col', 'COL.COLO4_31074' => 'col', 'COL.COLO4_31465' => 'col', 'COL.COLO4_36438' => 'col', 'COL.COLO4_36439' => 'col', 'Cpa.g.c38781' => 'cpa', 'Cpa.g.sc128.12' => 'cpa', 'Cpa.g.sc166.7' => 'cpa', 'Cpa.g.sc166.8' => 'cpa', 'Cpa.g.sc20.111' => 'cpa', 'Cpa.g.sc27.31' => 'cpa', 'Cpa.g.sc64.36' => 'cpa', 'Cpa.g.sc64.37' => 'cpa', 'Cpa.g.sc66.49' => 'cpa', 'Cpa.g.sc80.64' => 'cpa', 'CsaV3_1G012320' => 'csa', 'CsaV3_2G008480' => 'csa', 'CsaV3_2G033450' => 'csa', 'CsaV3_3G044830' => 'csa', 'CsaV3_4G033710' => 'csa', 'CsaV3_6G051730' => 'csa', 'CsaV3_7G025350' => 'csa', 'CSS0001067' => 'camsi', 'CSS0005996' => 'camsi', 'CSS0006590' => 'camsi', 'CSS0009673' => 'camsi', 'CSS0010201' => 'camsi', 'CSS0010549' => 'camsi', 'CSS0011364' => 'camsi', 'CSS0014473' => 'camsi', 'CSS0014961' => 'camsi', 'CSS0020191' => 'camsi', 'CSS0021165' => 'camsi', 'CSS0022306' => 'camsi', 'CSS0030591' => 'camsi', 'CSS0030696' => 'camsi', 'CSS0032653' => 'camsi', 'CSS0037487' => 'camsi', 'CSS0041102' => 'camsi', 'CSS0041261' => 'camsi', 'CSS0046246' => 'camsi', 'CSS0049256' => 'camsi', 'DCAR_004075' => 'dca', 'DCAR_011538' => 'dca', 'DCAR_019553' => 'dca', 'DCAR_020952' => 'dca', 'DCAR_021739' => 'dca', 'DCAR_027407' => 'dca', 'DCAR_027913' => 'dca', 'DCAR_028066' => 'dca', 'Dinv05899' => 'din', 'Dinv07563' => 'din', 'Dinv08010' => 'din', 'Dinv14125' => 'din', 'Dinv20172' => 'din', 'Dinv30743' => 'din', 'Dinv31229' => 'din', 'Dinv34162' => 'din', 'Dinv36028' => 'din', 'Dinv39368' => 'din', 'Dinv40565' => 'din', 'Dinv41706' => 'din', 'Duzib052G0089' => 'dzi', 'Duzib116G0641' => 'dzi', 'Duzib132G0069' => 'dzi', 'Duzib132G1219' => 'dzi', 'Duzib147G0278' => 'dzi', 'Duzib160G0480' => 'dzi', 'Duzib170G0661' => 'dzi', 'Duzib177G0591' => 'dzi', 'Duzib187G1353' => 'dzi', 'Duzib192G0858' => 'dzi', 'Duzib192G0883' => 'dzi', 'Duzib213G0506' => 'dzi', 'Duzib235G0289' => 'dzi', 'Duzib251G0422' => 'dzi', 'ECA232G3898' => 'eca', 'ECA233G5950' => 'eca', 'ECA234G1699' => 'eca', 'ECA234G2421' => 'eca', 'ECA236G0426' => 'eca', 'ECA236G4331' => 'eca', 'ECA248G2573' => 'eca', 'EL10Ac1g00077' => 'bvu', 'EL10Ac1g01746' => 'bvu', 'EL10Ac2g03464' => 'bvu', 'EL10Ac4g08176' => 'bvu', 'EL10Ac7g17521' => 'bvu', 'EL10Ac8g20386' => 'bvu', 'EL10Ac9g21343' => 'bvu', 'EL10Ac9g22688' => 'bvu', 'Eucgr.B03434' => 'egr', 'Eucgr.D00618' => 'egr', 'Eucgr.E02395' => 'egr', 'Eucgr.F01129' => 'egr', 'Eucgr.F02622' => 'egr', 'Eucgr.F04207' => 'egr', 'FAN01G0570' => 'fan', 'FAN03G3351' => 'fan', 'FAN06G3702' => 'fan', 'FAN07G2149' => 'fan', 'FAN10G3758' => 'fan', 'FAN11G1170' => 'fan', 'FAN11G2050' => 'fan', 'FAN11G2724' => 'fan', 'FAN12G1700' => 'fan', 'FAN12G2028' => 'fan', 'FAN15G1160' => 'fan', 'FAN15G3063' => 'fan', 'FAN16G2540' => 'fan', 'FAN16G3077' => 'fan', 'FAN16G3624' => 'fan', 'FAN17G0221' => 'fan', 'FAN20G2492' => 'fan', 'FAN20G2905' => 'fan', 'FAN21G0548' => 'fan', 'FAN21G1300' => 'fan', 'FAN22G0077' => 'fan', 'FAN22G1315' => 'fan', 'FAN24G1280' => 'fan', 'FAN24G1445' => 'fan', 'FAN24G3527' => 'fan', 'FAN25G0464' => 'fan', 'FAN25G2885' => 'fan', 'FAN25G3270' => 'fan', 'FAN27G1101' => 'fan', 'FAN27G2846' => 'fan', 'FAN27G3524' => 'fan', 'FvH4_2g11770' => 'fve', 'FvH4_2g15630' => 'fve', 'FvH4_3g05570' => 'fve', 'FvH4_3g09110' => 'fve', 'FvH4_3g19940' => 'fve', 'FvH4_4g04821' => 'fve', 'FvH4_4g31480' => 'fve', 'FvH4_7g01740' => 'fve', 'Glyma.05G130400' => 'gma', 'Glyma.05G156400' => 'gma', 'Glyma.07G197000' => 'gma', 'Glyma.08G085151' => 'gma', 'Glyma.08G114500' => 'gma', 'Glyma.08G300400' => 'gma', 'Glyma.10G215800' => 'gma', 'Glyma.12G224400' => 'gma', 'Glyma.13G179300' => 'gma', 'Glyma.13G218151' => 'gma', 'Glyma.13G238800' => 'gma', 'Glyma.13G276900' => 'gma', 'Glyma.14G078200' => 'gma', 'Glyma.15G074500' => 'gma', 'Glyma.15G094100' => 'gma', 'Glyma.17G247200' => 'gma', 'Glyma.18G120100' => 'gma', 'Glyma.20G176000' => 'gma', 'Gohir.A01G063600' => 'ghi', 'Gohir.A01G170301' => 'ghi', 'Gohir.A02G060500' => 'ghi', 'Gohir.A05G133850' => 'ghi', 'Gohir.A05G161400' => 'ghi', 'Gohir.A06G012900' => 'ghi', 'Gohir.A06G035901' => 'ghi', 'Gohir.A06G127100' => 'ghi', 'Gohir.A06G210500' => 'ghi', 'Gohir.A08G008650' => 'ghi', 'Gohir.A09G072700' => 'ghi', 'Gohir.A09G088301' => 'ghi', 'Gohir.A10G040600' => 'ghi', 'Gohir.A12G036300' => 'ghi', 'Gohir.A12G143350' => 'ghi', 'Gohir.A12G165500' => 'ghi', 'Gohir.A13G145700' => 'ghi', 'Gohir.D01G050000' => 'ghi', 'Gohir.D01G051366' => 'ghi', 'Gohir.D01G161350' => 'ghi', 'Gohir.D02G065900' => 'ghi', 'Gohir.D05G164200' => 'ghi', 'Gohir.D05G355500' => 'ghi', 'Gohir.D06G010400' => 'ghi', 'Gohir.D06G111250' => 'ghi', 'Gohir.D06G132000' => 'ghi', 'Gohir.D06G210500' => 'ghi', 'Gohir.D07G165675' => 'ghi', 'Gohir.D08G062240' => 'ghi', 'Gohir.D08G086101' => 'ghi', 'Gohir.D08G138060' => 'ghi', 'Gohir.D09G072300' => 'ghi', 'Gohir.D10G041400' => 'ghi', 'Gohir.D11G191020' => 'ghi', 'Gohir.D11G212066' => 'ghi', 'Gohir.D12G036300' => 'ghi', 'Gohir.D12G168600' => 'ghi', 'Gohir.D13G150600' => 'ghi', 'Gorai.001G057300' => 'gra', 'Gorai.002G069900' => 'gra', 'Gorai.002G200000' => 'gra', 'Gorai.003G067600' => 'gra', 'Gorai.005G074800' => 'gra', 'Gorai.006G087300' => 'gra', 'Gorai.008G037500' => 'gra', 'Gorai.008G181400' => 'gra', 'Gorai.009G169400' => 'gra', 'Gorai.009G387900' => 'gra', 'Gorai.010G013300' => 'gra', 'Gorai.010G153800' => 'gra', 'Gorai.010G255800' => 'gra', 'Gorai.011G043700' => 'gra', 'Gorai.011G198900' => 'gra', 'Gorai.013G168400' => 'gra', 'GSVIVG01005212001' => 'vvi', 'GSVIVG01006163001' => 'vvi', 'GSVIVG01009625001' => 'vvi', 'GSVIVG01014338001' => 'vvi', 'GSVIVG01020005001' => 'vvi', 'GSVIVG01021450001' => 'vvi', 'GSVIVG01023975001' => 'vvi', 'GSVIVG01034490001' => 'vvi', 'HanXRQChr04g0112071' => 'han', 'HanXRQChr05g0131151' => 'han', 'HanXRQChr09g0262371' => 'han', 'HanXRQChr09g0268401' => 'han', 'HanXRQChr10g0279241' => 'han', 'HanXRQChr10g0297961' => 'han', 'HanXRQChr11g0326231' => 'han', 'HanXRQChr11g0328471' => 'han', 'HanXRQChr16g0507941' => 'han', 'HanXRQChr17g0560211' => 'han', 'Haze_02108' => 'cav', 'Haze_02428' => 'cav', 'Haze_05593' => 'cav', 'Haze_06448' => 'cav', 'Haze_09427' => 'cav', 'Haze_12022' => 'cav', 'Haze_17612' => 'cav', 'Haze_17928' => 'cav', 'Hma1.2p1_0032F.1_g019250' => 'hma', 'Hma1.2p1_0163F.1_g072690' => 'hma', 'Hma1.2p1_0265F.1_g106710' => 'hma', 'Hma1.2p1_0286F.1_g113970' => 'hma', 'Hma1.2p1_0363F.1_g136640' => 'hma', 'Hma1.2p1_0584F.1_g183470' => 'hma', 'Hma1.2p1_0885F.1_g232570' => 'hma', 'HPP92_006022' => 'vpl', 'HPP92_007320' => 'vpl', 'HPP92_011521' => 'vpl', 'HPP92_019387' => 'vpl', 'HPP92_024038' => 'vpl', 'Hund05891' => 'sun', 'Hund06450' => 'sun', 'Hund12053' => 'sun', 'Hund16800' => 'sun', 'Hund21222' => 'sun', 'Hund22896' => 'sun', 'Hund23746' => 'sun', 'Hund27083' => 'sun', 'Lalb_Chr02g0141831' => 'lal', 'Lalb_Chr02g0141841' => 'lal', 'Lalb_Chr05g0220411' => 'lal', 'Lalb_Chr06g0162081' => 'lal', 'Lalb_Chr09g0327651' => 'lal', 'Lalb_Chr13g0295051' => 'lal', 'Lalb_Chr15g0086801' => 'lal', 'Lalb_Chr16g0383781' => 'lal', 'Lalb_Chr16g0383791' => 'lal', 'Lalb_Chr18g0055441' => 'lal', 'Lalb_Chr18g0059611' => 'lal', 'Lalb_Chr20g0109661' => 'lal', 'Lalb_Chr20g0109831' => 'lal', 'Lalb_Chr20g0121871' => 'lal', 'Lalb_Chr22g0355361' => 'lal', 'Lalb_Chr25g0286371' => 'lal', 'Lj1A1187G43' => 'lonja', 'Lj1A1205T50' => 'lonja', 'Lj1A800G33' => 'lonja', 'Lj1C1187T7' => 'lonja', 'Lj1C843T11' => 'lonja', 'Lj1g0010940' => 'lja', 'Lj2A288T69' => 'lonja', 'Lj3g0024276' => 'lja', 'Lj4A47T76' => 'lonja', 'Lj4g0005805' => 'lja', 'Lj4g0006097' => 'lja', 'Lj4g0008528' => 'lja', 'Lj4g0024907' => 'lja', 'Lj5g0012472' => 'lja', 'Lj5g0018648' => 'lja', 'Lj6C789G1' => 'lonja', 'Lj6g0004000' => 'lja', 'Lj7A292G67' => 'lonja', 'Lj7A292T64' => 'lonja', 'Lj9A400T58' => 'lonja', 'Lsat_1_v5_gn_1_126181' => 'lsa', 'Lsat_1_v5_gn_4_123041' => 'lsa', 'Lsat_1_v5_gn_4_133620' => 'lsa', 'Lsat_1_v5_gn_4_53221' => 'lsa', 'Lsat_1_v5_gn_4_71961' => 'lsa', 'Lsat_1_v5_gn_7_105241' => 'lsa', 'Lsat_1_v5_gn_7_21361' => 'lsa', 'Lsat_1_v5_gn_7_28860' => 'lsa', 'Lsat_1_v5_gn_7_31260' => 'lsa', 'Lsat_1_v5_gn_8_52801' => 'lsa', 'Manes.02G191400' => 'mes', 'Manes.03G110100' => 'mes', 'Manes.04G071100' => 'mes', 'Manes.05G100500' => 'mes', 'Manes.05G164700' => 'mes', 'Manes.15G087000' => 'mes', 'Manes.15G121500' => 'mes', 'Manes.16G028300' => 'mes', 'Manes.17G046100' => 'mes', 'Manes.17G069800' => 'mes', 'Manes.18G100500' => 'mes', 'Mapoly0002s0109' => 'mpo', 'Mapoly0024s0007' => 'mpo', 'Mapoly0089s0032' => 'mpo', 'MBI04_g42241_MAGBIO' => 'mbi', 'MBI05_g11988_MAGBIO' => 'mbi', 'MBI05_g35452_MAGBIO' => 'mbi', 'MBI07_g30179_MAGBIO' => 'mbi', 'MBI07_g35859_MAGBIO' => 'mbi', 'MBI07_g35860_MAGBIO' => 'mbi', 'MBI07_g37166_MAGBIO' => 'mbi', 'MBI08_g18172_MAGBIO' => 'mbi', 'MBI09_g08441_MAGBIO' => 'mbi', 'MBI13_g01676_MAGBIO' => 'mbi', 'MBI14_g42955_MAGBIO' => 'mbi', 'MBI16_g13161_MAGBIO' => 'mbi', 'MBI17_g27204_MAGBIO' => 'mbi', 'MBI19_g21595_MAGBIO' => 'mbi', 'MD00G1148400' => 'mdo', 'MD02G1301200' => 'mdo', 'MD03G1227800' => 'mdo', 'MD05G1041100' => 'mdo', 'MD05G1124800' => 'mdo', 'MD05G1284000' => 'mdo', 'MD05G1338800' => 'mdo', 'MD05G1338900' => 'mdo', 'MD07G1022800' => 'mdo', 'MD10G1047500' => 'mdo', 'MD10G1127500' => 'mdo', 'MD10G1262300' => 'mdo', 'MD10G1293800' => 'mdo', 'MD16G1074300' => 'mdo', 'Medtr1g021670' => 'mtr', 'Medtr1g096320' => 'mtr', 'Medtr2g013690' => 'mtr', 'Medtr2g019450' => 'mtr', 'Medtr2g085170' => 'mtr', 'Medtr4g088785' => 'mtr', 'Medtr8g055930' => 'mtr', 'Medtr8g085850' => 'mtr', 'MELO3C002605.2' => 'cme', 'MELO3C003891.2' => 'cme', 'MELO3C004012.2' => 'cme', 'MELO3C007134.2' => 'cme', 'MELO3C008118.2' => 'cme', 'MELO3C016700.2' => 'cme', 'MELO3C024127.2' => 'cme', 'MELO3C033361.2' => 'cme', 'MELO3C033362.2' => 'cme', 'Migut.C00430' => 'egut', 'Migut.C01246' => 'egut', 'Migut.E00101' => 'egut', 'Migut.H01486' => 'egut', 'Migut.H01939' => 'egut', 'Migut.K00360' => 'egut', 'Migut.M00910' => 'egut', 'Migut.M01139' => 'egut', 'Migut.N02677' => 'egut', 'MSTRG.13252' => 'ama', 'MSTRG.14701' => 'ama', 'MSTRG.1521' => 'ama', 'MSTRG.15884' => 'ama', 'MSTRG.16242' => 'ama', 'MSTRG.22285' => 'ama', 'MSTRG.22444' => 'ama', 'MSTRG.2349' => 'ama', 'MSTRG.26308' => 'ama', 'MSTRG.28296' => 'ama', 'MSTRG.9895' => 'ama', 'Nitab4.5_0000110g0060' => 'nta', 'Nitab4.5_0000420g0130' => 'nta', 'Nitab4.5_0000422g0030' => 'nta', 'Nitab4.5_0000560g0180' => 'nta', 'Nitab4.5_0000703g0100' => 'nta', 'Nitab4.5_0000786g0200' => 'nta', 'Nitab4.5_0001336g0020' => 'nta', 'Nitab4.5_0001796g0030' => 'nta', 'Nitab4.5_0003348g0060' => 'nta', 'Nitab4.5_0003698g0040' => 'nta', 'Nitab4.5_0003942g0090' => 'nta', 'Nitab4.5_0004775g0070' => 'nta', 'Nitab4.5_0004864g0030' => 'nta', 'Nitab4.5_0005615g0020' => 'nta', 'Nitab4.5_0009288g0030' => 'nta', 'Nitab4.5_0009341g0010' => 'nta', 'Nitab4.5_0009535g0010' => 'nta', 'Nn1g03995' => 'nnu', 'Nn1g04100' => 'nnu', 'Nn1g06530' => 'nnu', 'Nn3g16404' => 'nnu', 'Nn3g17212' => 'nnu', 'Nn3g20776' => 'nnu', 'Nn3g21923' => 'nnu', 'Nn5g27737' => 'nnu', 'Nn5g29461' => 'nnu', 'Nn7g38355' => 'nnu', 'Nn8g39873' => 'nnu', 'Oeu000548.2' => 'oeu', 'Oeu004672.1' => 'oeu', 'Oeu015605.2' => 'oeu', 'Oeu016092.1' => 'oeu', 'Oeu017879.3' => 'oeu', 'Oeu024910.1' => 'oeu', 'Oeu028965.1' => 'oeu', 'Oeu031269.1' => 'oeu', 'Oeu031270.1' => 'oeu', 'Oeu032535.1' => 'oeu', 'Oeu034151.1' => 'oeu', 'Oeu034152.1' => 'oeu', 'Oeu034588.2' => 'oeu', 'Oeu050846.1' => 'oeu', 'Oeu050849.2' => 'oeu', 'Oeu051063.2' => 'oeu', 'Oeu052368.1' => 'oeu', 'Oeu052370.1' => 'oeu', 'Os01g0210400' => 'osa', 'Os01g0304300' => 'osa', 'Os01g0749100' => 'osa', 'Os02g0745800' => 'osa', 'Os03g0769050' => 'osa', 'Os05g0531500' => 'osa', 'Os06g0724300' => 'osa', 'Os11g0198100' => 'osa', 'Peaxi162Scf00069g01425' => 'pax', 'Peaxi162Scf00280g00811' => 'pax', 'Peaxi162Scf00310g00615' => 'pax', 'Peaxi162Scf00362g00542' => 'pax', 'Peaxi162Scf00461g00310' => 'pax', 'Peaxi162Scf00530g00118' => 'pax', 'Peaxi162Scf00541g00057' => 'pax', 'Peaxi162Scf00661g00017' => 'pax', 'Peaxi162Scf00926g00027' => 'pax', 'Peaxi162Scf01064g00263' => 'pax', 'Peaxi162Scf01211g00135' => 'pax', 'PGR004G2336' => 'pgr', 'PGR042G0327' => 'pgr', 'PGR042G1957' => 'pgr', 'PGR042G2003' => 'pgr', 'PGR042G3929' => 'pgr', 'PGR083G1137' => 'pgr', 'PGR083G1364' => 'pgr', 'PGSC0003DMG400003381' => 'stu', 'PGSC0003DMG400003417' => 'stu', 'PGSC0003DMG400008981' => 'stu', 'PGSC0003DMG400012417' => 'stu', 'PGSC0003DMG400012823' => 'stu', 'PGSC0003DMG400016885' => 'stu', 'PGSC0003DMG400022812' => 'stu', 'PGSC0003DMG400029726' => 'stu', 'PGSC0003DMG401009243' => 'stu', 'PGSC0003DMG401031505' => 'stu', 'PGSC0003DMG402031505' => 'stu', 'Phvul.001G017600' => 'pvu', 'Phvul.002G193500' => 'pvu', 'Phvul.002G228900' => 'pvu', 'Phvul.002G236800' => 'pvu', 'Phvul.003G049500' => 'pvu', 'Phvul.005G072000' => 'pvu', 'Phvul.006G164800' => 'pvu', 'Phvul.006G185100' => 'pvu', 'Phvul.007G090000' => 'pvu', 'Potri.001G399800' => 'ptr', 'Potri.002G149900' => 'ptr', 'Potri.004G044100' => 'ptr', 'Potri.004G177600' => 'ptr', 'Potri.009G138000' => 'ptr', 'Potri.010G094000' => 'ptr', 'Potri.011G053000' => 'ptr', 'Potri.011G119300' => 'ptr', 'Potri.013G113700' => 'ptr', 'Potri.018G107800' => 'ptr', 'Potri.019G084100' => 'ptr', 'Pp3c14_23720' => 'ppa', 'Pp3c16_6340' => 'ppa', 'Pp3c23_13420' => 'ppa', 'Pp3c24_2740' => 'ppa', 'Pp3c25_860' => 'ppa', 'Pp3c8_21750' => 'ppa', 'Prupe.1G273000' => 'ppe', 'Prupe.1G273700' => 'ppe', 'Prupe.1G274100' => 'ppe', 'Prupe.2G023300' => 'ppe', 'Prupe.4G048000' => 'ppe', 'Prupe.4G080400' => 'ppe', 'Prupe.4G181200' => 'ppe', 'Prupe.8G056900' => 'ppe', 'Prupe.8G168700' => 'ppe', 'Psat1g189080' => 'psa', 'Psat1g204760' => 'psa', 'Psat4g175560' => 'psa', 'Psat4g177720' => 'psa', 'Psat5g244240' => 'psa', 'Psat6g010720' => 'psa', 'Psat6g187200' => 'psa', 'Psat7g072040' => 'psa', 'PSO017G3501' => 'pso', 'PSO063G2148' => 'pso', 'PSO063G5608' => 'pso', 'PSO210G6392' => 'pso', 'PSO541G2319' => 'pso', 'PSO541G2836' => 'pso', 'PSO541G4012' => 'pso', 'PSO541G6253' => 'pso', 'PSO675G0580' => 'pso', 'PSO675G0856' => 'pso', 'PSO675G5635' => 'pso', 'PSO675G9157' => 'pso', 'PSO832G1660' => 'pso', 'PSO832G1969' => 'pso', 'QL02p007186' => 'qlo', 'QL02p033904' => 'qlo', 'QL03p064391' => 'qlo', 'QL05p040593' => 'qlo', 'QL05p058242' => 'qlo', 'QL08p021825' => 'qlo', 'QL11p004981' => 'qlo', 'RcHm_v2.0_Chr1g0318301' => 'rch', 'RcHm_v2.0_Chr4g0418501' => 'rch', 'RcHm_v2.0_Chr4g0439971' => 'rch', 'RcHm_v2.0_Chr5g0008541' => 'rch', 'RcHm_v2.0_Chr5g0014101' => 'rch', 'RcHm_v2.0_Chr5g0014131' => 'rch', 'RcHm_v2.0_Chr5g0033621' => 'rch', 'RcHm_v2.0_Chr6g0272041' => 'rch', 'RcHm_v2.0_Chr6g0278831' => 'rch', 'Rhsim02G0130400' => 'rsi', 'Rhsim02G0171100' => 'rsi', 'Rhsim05G0053000' => 'rsi', 'Rhsim05G0053100' => 'rsi', 'Rhsim06G0096500' => 'rsi', 'Rhsim06G0096600' => 'rsi', 'Rhsim06G0199100' => 'rsi', 'Rhsim12G0062300' => 'rsi', 'Rhsim12G0062800' => 'rsi', 'Sabra02G0118600' => 'sbr', 'Sabra04G0027300' => 'sbr', 'Sabra04G0119500' => 'sbr', 'Sabra08G0112500' => 'sbr', 'Sabra11G0036800' => 'sbr', 'Sabra11G0103800' => 'sbr', 'Sabra13G0096300' => 'sbr', 'Sabra16G0262300' => 'sbr', 'Sabra18G0091700' => 'sbr', 'Sabra19G0095400' => 'sbr', 'SalBow6G3080' => 'sbo', 'SalBow7G1157' => 'sbo', 'SalBow7G2123' => 'sbo', 'SalBow7G2285' => 'sbo', 'SalBow7G3537' => 'sbo', 'SalBow8G2947' => 'sbo', 'SalBow8G4463' => 'sbo', 'SalBow8G5466' => 'sbo', 'Sc01g0001750' => 'sci', 'Sc02g0006640' => 'sci', 'Sc02g0006670' => 'sci', 'Sc04g0008220' => 'sci', 'Sc05g0006190' => 'sci', 'Sc08g0002760' => 'sci', 'Sc17g0006170' => 'sci', 'Sc22g0002050' => 'sci', 'Sc23g0001190' => 'sci', 'Sc24g0000980' => 'sci', 'Sed0006245' => 'sed', 'Sed0007543' => 'sed', 'Sed0009411' => 'sed', 'Sed0010765' => 'sed', 'Sed0012944' => 'sed', 'Sed0014682' => 'sed', 'Sed0016174' => 'sed', 'Sed0016796' => 'sed', 'Sed0020317' => 'sed', 'Sed0021467' => 'sed', 'SEGI_01316' => 'sgi', 'SEGI_03374' => 'sgi', 'SEGI_16265' => 'sgi', 'SEGI_18569' => 'sgi', 'SEGI_20351' => 'sgi', 'SEGI_26395' => 'sgi', 'SEGI_29469' => 'sgi', 'SEGI_34771' => 'sgi', 'SEGI_36769' => 'sgi', 'SEGI_37139' => 'sgi', 'SGA_v2.0_scaffold100G29687' => 'sas', 'SGA_v2.0_scaffold118G32472' => 'sas', 'SGA_v2.0_scaffold14G07051' => 'sas', 'SGA_v2.0_scaffold183G39845' => 'sas', 'SGA_v2.0_scaffold1G00174' => 'sas', 'SGA_v2.0_scaffold22G09714' => 'sas', 'SGA_v2.0_scaffold333G48992' => 'sas', 'SGA_v2.0_scaffold46G17491' => 'sas', 'SGA_v2.0_scaffold49G18294' => 'sas', 'SGA_v2.0_scaffold63G21658' => 'sas', 'SHI01741' => 'shi', 'SHI05771' => 'shi', 'SHI18077' => 'shi', 'SHI20525' => 'shi', 'SHI20527' => 'shi', 'SHI20528' => 'shi', 'SMO172G0185' => 'smo', 'SMO198G0020' => 'smo', 'SMO351G0006' => 'smo', 'SMO356G0118' => 'smo', 'SMO358G0296' => 'smo', 'SMO367G0079' => 'smo', 'SMO367G1277' => 'smo', 'Solyc01g014220.3' => 'sly', 'Solyc01g111770.2' => 'sly', 'Solyc02g078180.3' => 'sly', 'Solyc03g006430.3' => 'sly', 'Solyc03g006456.1' => 'sly', 'Solyc03g079860.2' => 'sly', 'Solyc04g079770.3' => 'sly', 'Solyc05g007430.4' => 'sly', 'Solyc07g063150.3' => 'sly', 'Solyc08g016620.3' => 'sly', 'Solyc09g057590.3' => 'sly', 'Solyc09g057600.1' => 'sly', 'Solyc10g009050.3' => 'sly', 'Solyc11g017420.2' => 'sly', 'Sopen01g053810' => 'spe', 'Sopen02g023040' => 'spe', 'Sopen03g002440' => 'spe', 'Sopen04g033350' => 'spe', 'Sopen05g003310' => 'spe', 'Sopen07g004050' => 'spe', 'Sopen07g031340' => 'spe', 'Sopen08g006990' => 'spe', 'Sopen10g004830' => 'spe', 'Sopen11g009370' => 'spe', 'Sp1g24450' => 'spa', 'Sp1g29670' => 'spa', 'Sp1g39600' => 'spa', 'Sp2g11080' => 'spa', 'Sp2g13970' => 'spa', 'Sp4g16130' => 'spa', 'Sp6g13080' => 'spa', 'Sp7g37270' => 'spa', 'TAR371G0065' => 'tar', 'TAR376G0340' => 'tar', 'TAR376G0435' => 'tar', 'TAR381G0002' => 'tar', 'TAR381G1236' => 'tar', 'TAR624G0055' => 'tar', 'TAR624G0324' => 'tar', 'TAR624G0696' => 'tar', 'TAR624G0906' => 'tar', 'TAR625G0107' => 'tar', 'TAR626G0015' => 'tar', 'TAR626G1356' => 'tar', 'TAR627G0888' => 'tar', 'TAR628G0399' => 'tar', 'TAR628G1327' => 'tar', 'TAR629G2831' => 'tar', 'TAR629G2874' => 'tar', 'TAR633G1432' => 'tar', 'TAR633G2771' => 'tar', 'THA.LOC104803394' => 'tha', 'THA.LOC104805153' => 'tha', 'THA.LOC104806784' => 'tha', 'THA.LOC104810473' => 'tha', 'THA.LOC104813100' => 'tha', 'THA.LOC104814215' => 'tha', 'THA.LOC104815554' => 'tha', 'THA.LOC104820544' => 'tha', 'THA.LOC104824754' => 'tha', 'THA.LOC104827717' => 'tha', 'Thecc.02G031400' => 'tca', 'Thecc.02G055900' => 'tca', 'Thecc.02G350800' => 'tca', 'Thecc.06G150900' => 'tca', 'Thecc.06G186600' => 'tca', 'Thecc.07G089600' => 'tca', 'Thecc.08G020400' => 'tca', 'Thecc.08G182100' => 'tca', 'Thhalv10000873m.g' => 'esa', 'Thhalv10004185m.g' => 'esa', 'Thhalv10006981m.g' => 'esa', 'Thhalv10007204m.g' => 'esa', 'Thhalv10011374m.g' => 'esa', 'Thhalv10013482m.g' => 'esa', 'Thhalv10017801m.g' => 'esa', 'Thhalv10024983m.g' => 'esa', 'TPR.G12072' => 'tpr', 'TPR.G15769' => 'tpr', 'TPR.G16504' => 'tpr', 'TPR.G16506' => 'tpr', 'TPR.G24345' => 'tpr', 'TPR.G26666' => 'tpr', 'TPR.G27320' => 'tpr', 'TPR.G31819' => 'tpr', 'TPR.G38879' => 'tpr', 'TPR.G39015' => 'tpr', 'TPR.G8819' => 'tpr', 'TWI09G0924' => 'twi', 'TWI12G0811' => 'twi', 'TWI12G1294' => 'twi', 'TWI31G0150' => 'twi', 'TWI36G1262' => 'twi', 'TWI38G1287' => 'twi', 'TWI38G1633' => 'twi', 'TWI38G1982' => 'twi', 'TWI39G0116' => 'twi', 'TWI60G1011' => 'twi', 'TWI63G0171' => 'twi', 'TWI73G0839' => 'twi', 'TWI79G1511' => 'twi', 'unitig_0.g915' => 'ugi', 'unitig_0.g916' => 'ugi', 'unitig_21.g20219' => 'ugi', 'unitig_21.g20416' => 'ugi', 'unitig_578.g16132' => 'ugi', 'unitig_578.g16718' => 'ugi', 'unitig_62.g23481' => 'ugi', 'unitig_744.g24535' => 'ugi', 'unitig_749.g13525' => 'ugi', 'vmacro01248' => 'vma', 'vmacro02290' => 'vma', 'vmacro10946' => 'vma', 'vmacro11865' => 'vma', 'vmacro12493' => 'vma', 'vmacro17322' => 'vma', 'vmacro21599' => 'vma', 'vmacro23041' => 'vma', 'VMungo0251G0004' => 'vmu', 'VMungo0251G2639' => 'vmu', 'VMungo0251G2967' => 'vmu', 'VMungo0540G0864' => 'vmu', 'VMungo0540G1569' => 'vmu', 'VMungo0647G0317' => 'vmu', 'VMungo0720G1373' => 'vmu', 'VMungo0720G1508' => 'vmu', 'VMungo1080G0485' => 'vmu', 'VMungo1215G3177' => 'vmu', 'Zm00001eb112600' => 'zma', 'Zm00001eb120220' => 'zma', 'Zm00001eb153240' => 'zma', 'Zm00001eb168880' => 'zma', 'Zm00001eb213920' => 'zma', 'Zm00001eb228280' => 'zma', 'Zm00001eb254580' => 'zma', 'Zm00001eb272180' => 'zma', 'Zm00001eb293190' => 'zma', 'Zm00001eb322930' => 'zma', 'Zm00001eb353360' => 'zma', 'Zm00001eb353390' => 'zma', 'Zm00001eb353430' => 'zma', 'Zm00001eb353440' => 'zma', 'Zm00001eb353780' => 'zma' ) $gf_id = 'HOM05D000499' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000499' ) $data_identifier = 'HOM05D000499' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 29, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 12, 'amhyb' => (int) 8, 'aly' => (int) 12, 'aox' => (int) 9, 'arhy' => (int) 26, 'ath' => (int) 8, 'atr' => (int) 7, 'acertr' => (int) 10, 'cqu' => (int) 15, 'bca' => (int) 29, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 11, 'cansat' => (int) 8, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 9, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 8, 'cpa' => (int) 10, 'csa' => (int) 7, 'camsi' => (int) 20, 'dca' => (int) 8, 'din' => (int) 12, 'dzi' => (int) 14, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 6, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 38, 'gra' => (int) 16, 'vvi' => (int) 8, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 5, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 11, 'lja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 11, 'mpo' => (int) 3, 'mbi' => (int) 14, 'mdo' => (int) 14, 'mtr' => (int) 8, 'cme' => (int) 9, 'egut' => (int) 9, 'ama' => (int) 11, 'nta' => (int) 17, 'nnu' => (int) 11, 'oeu' => (int) 18, 'osa' => (int) 8, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 6, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 9, 'rsi' => (int) 9, 'sbr' => (int) 10, 'sbo' => (int) 8, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 10, 'sas' => (int) 10, 'shi' => (int) 6, 'smo' => (int) 7, 'sly' => (int) 14, 'spe' => (int) 10, 'spa' => (int) 8, 'tar' => (int) 19, 'tha' => (int) 10, 'tca' => (int) 8, 'esa' => (int) 8, 'tpr' => (int) 11, 'twi' => (int) 13, 'ugi' => (int) 9, 'vma' => (int) 8, 'vmu' => (int) 10, 'zma' => (int) 15 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb353780' $species_info = array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ) $local_species = 'atr' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000499', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1066', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p29780' => 'bna', 'A02p33180' => 'bna', 'A03p16470' => 'bna', 'A03p66010' => 'bna', 'A04p25970' => 'bna', 'A06p01270' => 'bna', 'A06p46080' => 'bna', 'A07p11400' => 'bna', 'A08p01840' => 'bna', 'A08p08230' => 'bna', 'A08p25740' => 'bna', 'A09p32070' => 'bna', 'A09p37830' => 'bna', 'A09p42840' => 'bna', 'A09p42850' => 'bna', 'Aa31LG10G2060' => 'aar', 'Aa31LG2G7410' => 'aar', 'Aa31LG6G10200' => 'aar', 'Aa31LG6G16680' => 'aar', 'Aa31LG6G8470' => 'aar', 'Aa31LG9G12730' => 'aar', 'Aa31LG9G13680' => 'aar', 'Aa31LG9G14920' => 'aar', 'Aa31LG9G6650' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4977' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5467' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3254' => 'aag', 'Actinidia02578' => 'ach', 'Actinidia07693' => 'ach', 'Actinidia08413' => 'ach', 'Actinidia08414' => 'ach', 'Actinidia15289' => 'ach', 'Actinidia19871' => 'ach', 'Actinidia21475' => 'ach', 'Actinidia22576' => 'ach', 'Actinidia28327' => 'ach', 'Actinidia32491' => 'ach', 'Actinidia39463' => 'ach', 'Actinidia39571' => 'ach', 'Ah.01g013750' => 'amhyb', 'Ah.01g023210' => 'amhyb', 'Ah.04g164850' => 'amhyb', 'Ah.05g178060' => 'amhyb', 'Ah.07g204270' => 'amhyb', 'Ah.07g208480' => 'amhyb', 'Ah.09g237410' => 'amhyb', 'Ah.14g089460' => 'amhyb', 'AL1G41790' => 'aly', 'AL1G49050' => 'aly', 'AL1G53810' => 'aly', 'AL1G61400' => 'aly', 'AL4G18580' => 'aly', 'AL5G12510' => 'aly', 'AL5G12540' => 'aly', 'AL6G43230' => 'aly', 'AL7G10370' => 'aly', 'AL7G19250' => 'aly', 'AL8G12240' => 'aly', 'AL8G18540' => 'aly', 'Aqoxy1G02409' => 'aox', 'Aqoxy2G03993' => 'aox', 'Aqoxy3G03357' => 'aox', 'Aqoxy4G00785' => 'aox', 'Aqoxy5G02598' => 'aox', 'Aqoxy6G00132' => 'aox', 'Aqoxy7G01776' => 'aox', 'Aqoxy7G02316' => 'aox', 'Aqoxy7G03973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.12AFKW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B8730' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27IQR1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3F75VG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3RE0GA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41TCQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.527VTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FIR39' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5W8UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DA38EV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ63HS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H1I32C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HC27T5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4M8AP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7N3CZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9UVDZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LS1NQA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT1D4B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SKC4TM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCFV76' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF9Q1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQWD9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1ZM88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WE07RT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YCK7VH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJE6Q6' => 'arhy', 'AT1G28240' => 'ath', 'AT1G34550' => 'ath', 'AT1G53040' => 'ath', 'AT2G02910' => 'ath', 'AT4G09630' => 'ath', 'AT4G38500' => 'ath', 'AT5G42660' => 'ath', 'AT5G46220' => 'ath', 'ATR0152G026' => 'atr', 'ATR0564G343' => 'atr', 'ATR0706G151' => 'atr', 'ATR0733G207' => 'atr', 'ATR0751G234' => 'atr', 'ATR0807G048' => 'atr', 'ATR1091G084' => 'atr', 'Atru.chr10.1229' => 'acertr', 'Atru.chr10.1230' => 'acertr', 'Atru.chr10.1874' => 'acertr', 'Atru.chr11.1808' => 'acertr', 'Atru.chr13.1795' => 'acertr', 'Atru.chr13.570' => 'acertr', 'Atru.chr2.2608' => 'acertr', 'Atru.chr2.2609' => 'acertr', 'Atru.chr5.3428' => 'acertr', 'Atru.chr8.1171' => 'acertr', 'AUR62004651' => 'cqu', 'AUR62008675' => 'cqu', 'AUR62010014' => 'cqu', 'AUR62013004' => 'cqu', 'AUR62014825' => 'cqu', 'AUR62015015' => 'cqu', 'AUR62015151' => 'cqu', 'AUR62017020' => 'cqu', 'AUR62019422' => 'cqu', 'AUR62023570' => 'cqu', 'AUR62025571' => 'cqu', 'AUR62029098' => 'cqu', 'AUR62033863' => 'cqu', 'AUR62034296' => 'cqu', 'AUR62040075' => 'cqu', 'BcaB02g07334' => 'bca', 'BcaB02g10575' => 'bca', 'BcaB03g12119' => 'bca', 'BcaB03g12120' => 'bca', 'BcaB03g13945' => 'bca', 'BcaB04g17123' => 'bca', 'BcaB04g17867' => 'bca', 'BcaB04g19839' => 'bca', 'BcaB07g30317' => 'bca', 'BcaB07g32432' => 'bca', 'BcaB07g33362' => 'bca', 'BcaB08g36611' => 'bca', 'BcaC01g00028' => 'bca', 'BcaC01g01356' => 'bca', 'BcaC01g02034' => 'bca', 'BcaC01g06051' => 'bca', 'BcaC03g16839' => 'bca', 'BcaC03g17176' => 'bca', 'BcaC05g26829' => 'bca', 'BcaC06g31490' => 'bca', 'BcaC06g35344' => 'bca', 'BcaC06g36570' => 'bca', 'BcaC07g37537' => 'bca', 'BcaC08g43491' => 'bca', 'BcaC08g43773' => 'bca', 'BcaNung00234' => 'bca', 'BcaNung01982' => 'bca', 'BcaNung03707' => 'bca', 'BcaNung06454' => 'bca', 'BolC2t10762H' => 'bol', 'BolC2t11191H' => 'bol', 'BolC3t14322H' => 'bol', 'BolC3t19747H' => 'bol', 'BolC3t21425H' => 'bol', 'BolC4t27800H' => 'bol', 'BolC5t31423H' => 'bol', 'BolC6t35951H' => 'bol', 'BolC6t36282H' => 'bol', 'BolC7t40678H' => 'bol', 'BolC7t40679H' => 'bol', 'BolC7t42222H' => 'bol', 'BolC7t43492H' => 'bol', 'BolC7t46785H' => 'bol', 'BolC8t47853H' => 'bol', 'BolC9t56805H' => 'bol', 'BraA02t08000Z' => 'bra', 'BraA02t08341Z' => 'bra', 'BraA03t10936Z' => 'bra', 'BraA03t15657Z' => 'bra', 'BraA04t18100Z' => 'bra', 'BraA05t20523Z' => 'bra', 'BraA06t23353Z' => 'bra', 'BraA06t27473Z' => 'bra', 'BraA06t27769Z' => 'bra', 'BraA07t28928Z' => 'bra', 'BraA08t32236Z' => 'bra', 'BraA08t32841Z' => 'bra', 'BraA08t34524Z' => 'bra', 'BraA09t38742Z' => 'bra', 'BraA09t39295Z' => 'bra', 'C02p47180' => 'bna', 'C02p50990' => 'bna', 'C03p19360' => 'bna', 'C03p74950' => 'bna', 'C03p91000' => 'bna', 'C04p63260' => 'bna', 'C05p27050' => 'bna', 'C06p08750' => 'bna', 'C06p11490' => 'bna', 'C07p02820' => 'bna', 'C07p17180' => 'bna', 'C07p29440' => 'bna', 'C07p63730' => 'bna', 'C09p39260' => 'bna', 'CAN.G1164.34' => 'can', 'CAN.G1164.39' => 'can', 'CAN.G1530.3' => 'can', 'CAN.G162.61' => 'can', 'CAN.G176.6' => 'can', 'CAN.G289.49' => 'can', 'CAN.G370.21' => 'can', 'CAN.G370.22' => 'can', 'CAN.G371.117' => 'can', 'CAN.G58.37' => 'can', 'CAN.G588.98' => 'can', 'CANSAT21G2266' => 'cansat', 'CANSAT25G2799' => 'cansat', 'CANSAT35G0862' => 'cansat', 'CANSAT35G1704' => 'cansat', 'CANSAT35G1760' => 'cansat', 'CANSAT56G3971' => 'cansat', 'CANSAT56G4116' => 'cansat', 'CANSAT80G1259' => 'cansat', 'CARHR027730' => 'chi', 'CARHR033880' => 'chi', 'CARHR043270' => 'chi', 'CARHR145330' => 'chi', 'CARHR145340' => 'chi', 'CARHR175570' => 'chi', 'CARHR181570' => 'chi', 'CARHR258470' => 'chi', 'CARHR260490' => 'chi', 'CARHR294220' => 'chi', 'Carub.0001s2668' => 'cru', 'Carub.0001s3257' => 'cru', 'Carub.0001s4220' => 'cru', 'Carub.0005s0179' => 'cru', 'Carub.0006s2807' => 'cru', 'Carub.0007s0039' => 'cru', 'Carub.0008s0169' => 'cru', 'Carub.0008s0636' => 'cru', 'Ca_00338_v3' => 'car', 'Ca_00542_v3' => 'car', 'Ca_01844_v3' => 'car', 'Ca_10611_v3' => 'car', 'Ca_13326_v3' => 'car', 'Ca_17944_v3' => 'car', 'Ca_18546_v3' => 'car', 'Ca_24219_v3' => 'car', 'Ca_29972_v3' => 'car', 'CBR_g3681' => 'cbr', 'CBR_g40021' => 'cbr', 'Cc01_g08140' => 'ccan', 'Cc02_g13410' => 'ccan', 'Cc02_g37480' => 'ccan', 'Cc05_g12030' => 'ccan', 'Cc09_g03370' => 'ccan', 'Cc09_g10300' => 'ccan', 'Cc10_g03530' => 'ccan', 'Cc10_g11380' => 'ccan', 'CDE01G0176' => 'cde', 'CDE02G0675' => 'cde', 'CDE02G0942' => 'cde', 'CDE02G1153' => 'cde', 'CDE02G4177' => 'cde', 'CDE04G2117' => 'cde', 'CDE04G2736' => 'cde', 'CDE08G1161' => 'cde', 'CDE09G1238' => 'cde', 'Cfa000467' => 'cfa', 'Cfa000947' => 'cfa', 'Cfa004969' => 'cfa', 'Cfa005284' => 'cfa', 'Cfa008993' => 'cfa', 'Cfa018187' => 'cfa', 'Cfa018454' => 'cfa', 'Cfa020585' => 'cfa', 'Ciclev10000424m.g' => 'ccl', 'Ciclev10003605m.g' => 'ccl', 'Ciclev10007828m.g' => 'ccl', 'Ciclev10014620m.g' => 'ccl', 'Ciclev10015169m.g' => 'ccl', 'Ciclev10018291m.g' => 'ccl', 'Ciclev10028256m.g' => 'ccl', 'Ciclev10033822m.g' => 'ccl', 'CiPaw.05G060300' => 'cil', 'CiPaw.05G085000' => 'cil', 'CiPaw.06G083700' => 'cil', 'CiPaw.06G120300' => 'cil', 'CiPaw.09G060500' => 'cil', 'CiPaw.09G123800' => 'cil', 'CiPaw.11G169700' => 'cil', 'CiPaw.12G118300' => 'cil', 'CiPaw.15G071000' => 'cil', 'CiPaw.15G081900' => 'cil', 'ClCG01G024610' => 'cla', 'ClCG03G006070' => 'cla', 'ClCG05G019250' => 'cla', 'ClCG09G009500' => 'cla', 'ClCG11G008200' => 'cla', 'ClCG11G018080' => 'cla', 'COL.COLO4_17373' => 'col', 'COL.COLO4_22994' => 'col', 'COL.COLO4_26389' => 'col', 'COL.COLO4_27170' => 'col', 'COL.COLO4_31074' => 'col', 'COL.COLO4_31465' => 'col', 'COL.COLO4_36438' => 'col', 'COL.COLO4_36439' => 'col', 'Cpa.g.c38781' => 'cpa', 'Cpa.g.sc128.12' => 'cpa', 'Cpa.g.sc166.7' => 'cpa', 'Cpa.g.sc166.8' => 'cpa', 'Cpa.g.sc20.111' => 'cpa', 'Cpa.g.sc27.31' => 'cpa', 'Cpa.g.sc64.36' => 'cpa', 'Cpa.g.sc64.37' => 'cpa', 'Cpa.g.sc66.49' => 'cpa', 'Cpa.g.sc80.64' => 'cpa', 'CsaV3_1G012320' => 'csa', 'CsaV3_2G008480' => 'csa', 'CsaV3_2G033450' => 'csa', 'CsaV3_3G044830' => 'csa', 'CsaV3_4G033710' => 'csa', 'CsaV3_6G051730' => 'csa', 'CsaV3_7G025350' => 'csa', 'CSS0001067' => 'camsi', 'CSS0005996' => 'camsi', 'CSS0006590' => 'camsi', 'CSS0009673' => 'camsi', 'CSS0010201' => 'camsi', 'CSS0010549' => 'camsi', 'CSS0011364' => 'camsi', 'CSS0014473' => 'camsi', 'CSS0014961' => 'camsi', 'CSS0020191' => 'camsi', 'CSS0021165' => 'camsi', 'CSS0022306' => 'camsi', 'CSS0030591' => 'camsi', 'CSS0030696' => 'camsi', 'CSS0032653' => 'camsi', 'CSS0037487' => 'camsi', 'CSS0041102' => 'camsi', 'CSS0041261' => 'camsi', 'CSS0046246' => 'camsi', 'CSS0049256' => 'camsi', 'DCAR_004075' => 'dca', 'DCAR_011538' => 'dca', 'DCAR_019553' => 'dca', 'DCAR_020952' => 'dca', 'DCAR_021739' => 'dca', 'DCAR_027407' => 'dca', 'DCAR_027913' => 'dca', 'DCAR_028066' => 'dca', 'Dinv05899' => 'din', 'Dinv07563' => 'din', 'Dinv08010' => 'din', 'Dinv14125' => 'din', 'Dinv20172' => 'din', 'Dinv30743' => 'din', 'Dinv31229' => 'din', 'Dinv34162' => 'din', 'Dinv36028' => 'din', 'Dinv39368' => 'din', 'Dinv40565' => 'din', 'Dinv41706' => 'din', 'Duzib052G0089' => 'dzi', 'Duzib116G0641' => 'dzi', 'Duzib132G0069' => 'dzi', 'Duzib132G1219' => 'dzi', 'Duzib147G0278' => 'dzi', 'Duzib160G0480' => 'dzi', 'Duzib170G0661' => 'dzi', 'Duzib177G0591' => 'dzi', 'Duzib187G1353' => 'dzi', 'Duzib192G0858' => 'dzi', 'Duzib192G0883' => 'dzi', 'Duzib213G0506' => 'dzi', 'Duzib235G0289' => 'dzi', 'Duzib251G0422' => 'dzi', 'ECA232G3898' => 'eca', 'ECA233G5950' => 'eca', 'ECA234G1699' => 'eca', 'ECA234G2421' => 'eca', 'ECA236G0426' => 'eca', 'ECA236G4331' => 'eca', 'ECA248G2573' => 'eca', 'EL10Ac1g00077' => 'bvu', 'EL10Ac1g01746' => 'bvu', 'EL10Ac2g03464' => 'bvu', 'EL10Ac4g08176' => 'bvu', 'EL10Ac7g17521' => 'bvu', 'EL10Ac8g20386' => 'bvu', 'EL10Ac9g21343' => 'bvu', 'EL10Ac9g22688' => 'bvu', 'Eucgr.B03434' => 'egr', 'Eucgr.D00618' => 'egr', 'Eucgr.E02395' => 'egr', 'Eucgr.F01129' => 'egr', 'Eucgr.F02622' => 'egr', 'Eucgr.F04207' => 'egr', 'FAN01G0570' => 'fan', 'FAN03G3351' => 'fan', 'FAN06G3702' => 'fan', 'FAN07G2149' => 'fan', 'FAN10G3758' => 'fan', 'FAN11G1170' => 'fan', 'FAN11G2050' => 'fan', 'FAN11G2724' => 'fan', 'FAN12G1700' => 'fan', 'FAN12G2028' => 'fan', 'FAN15G1160' => 'fan', 'FAN15G3063' => 'fan', 'FAN16G2540' => 'fan', 'FAN16G3077' => 'fan', 'FAN16G3624' => 'fan', 'FAN17G0221' => 'fan', 'FAN20G2492' => 'fan', 'FAN20G2905' => 'fan', 'FAN21G0548' => 'fan', 'FAN21G1300' => 'fan', 'FAN22G0077' => 'fan', 'FAN22G1315' => 'fan', 'FAN24G1280' => 'fan', 'FAN24G1445' => 'fan', 'FAN24G3527' => 'fan', 'FAN25G0464' => 'fan', 'FAN25G2885' => 'fan', 'FAN25G3270' => 'fan', 'FAN27G1101' => 'fan', 'FAN27G2846' => 'fan', 'FAN27G3524' => 'fan', 'FvH4_2g11770' => 'fve', 'FvH4_2g15630' => 'fve', 'FvH4_3g05570' => 'fve', 'FvH4_3g09110' => 'fve', 'FvH4_3g19940' => 'fve', 'FvH4_4g04821' => 'fve', 'FvH4_4g31480' => 'fve', 'FvH4_7g01740' => 'fve', 'Glyma.05G130400' => 'gma', 'Glyma.05G156400' => 'gma', 'Glyma.07G197000' => 'gma', 'Glyma.08G085151' => 'gma', 'Glyma.08G114500' => 'gma', 'Glyma.08G300400' => 'gma', 'Glyma.10G215800' => 'gma', 'Glyma.12G224400' => 'gma', 'Glyma.13G179300' => 'gma', 'Glyma.13G218151' => 'gma', 'Glyma.13G238800' => 'gma', 'Glyma.13G276900' => 'gma', 'Glyma.14G078200' => 'gma', 'Glyma.15G074500' => 'gma', 'Glyma.15G094100' => 'gma', 'Glyma.17G247200' => 'gma', 'Glyma.18G120100' => 'gma', 'Glyma.20G176000' => 'gma', 'Gohir.A01G063600' => 'ghi', 'Gohir.A01G170301' => 'ghi', 'Gohir.A02G060500' => 'ghi', 'Gohir.A05G133850' => 'ghi', 'Gohir.A05G161400' => 'ghi', 'Gohir.A06G012900' => 'ghi', 'Gohir.A06G035901' => 'ghi', 'Gohir.A06G127100' => 'ghi', 'Gohir.A06G210500' => 'ghi', 'Gohir.A08G008650' => 'ghi', 'Gohir.A09G072700' => 'ghi', 'Gohir.A09G088301' => 'ghi', 'Gohir.A10G040600' => 'ghi', 'Gohir.A12G036300' => 'ghi', 'Gohir.A12G143350' => 'ghi', 'Gohir.A12G165500' => 'ghi', 'Gohir.A13G145700' => 'ghi', 'Gohir.D01G050000' => 'ghi', 'Gohir.D01G051366' => 'ghi', 'Gohir.D01G161350' => 'ghi', 'Gohir.D02G065900' => 'ghi', 'Gohir.D05G164200' => 'ghi', 'Gohir.D05G355500' => 'ghi', 'Gohir.D06G010400' => 'ghi', 'Gohir.D06G111250' => 'ghi', 'Gohir.D06G132000' => 'ghi', 'Gohir.D06G210500' => 'ghi', 'Gohir.D07G165675' => 'ghi', 'Gohir.D08G062240' => 'ghi', 'Gohir.D08G086101' => 'ghi', 'Gohir.D08G138060' => 'ghi', 'Gohir.D09G072300' => 'ghi', 'Gohir.D10G041400' => 'ghi', 'Gohir.D11G191020' => 'ghi', 'Gohir.D11G212066' => 'ghi', 'Gohir.D12G036300' => 'ghi', 'Gohir.D12G168600' => 'ghi', 'Gohir.D13G150600' => 'ghi', 'Gorai.001G057300' => 'gra', 'Gorai.002G069900' => 'gra', 'Gorai.002G200000' => 'gra', 'Gorai.003G067600' => 'gra', 'Gorai.005G074800' => 'gra', 'Gorai.006G087300' => 'gra', 'Gorai.008G037500' => 'gra', 'Gorai.008G181400' => 'gra', 'Gorai.009G169400' => 'gra', 'Gorai.009G387900' => 'gra', 'Gorai.010G013300' => 'gra', 'Gorai.010G153800' => 'gra', 'Gorai.010G255800' => 'gra', 'Gorai.011G043700' => 'gra', 'Gorai.011G198900' => 'gra', 'Gorai.013G168400' => 'gra', 'GSVIVG01005212001' => 'vvi', 'GSVIVG01006163001' => 'vvi', 'GSVIVG01009625001' => 'vvi', 'GSVIVG01014338001' => 'vvi', 'GSVIVG01020005001' => 'vvi', 'GSVIVG01021450001' => 'vvi', 'GSVIVG01023975001' => 'vvi', 'GSVIVG01034490001' => 'vvi', 'HanXRQChr04g0112071' => 'han', 'HanXRQChr05g0131151' => 'han', 'HanXRQChr09g0262371' => 'han', 'HanXRQChr09g0268401' => 'han', 'HanXRQChr10g0279241' => 'han', 'HanXRQChr10g0297961' => 'han', 'HanXRQChr11g0326231' => 'han', 'HanXRQChr11g0328471' => 'han', 'HanXRQChr16g0507941' => 'han', 'HanXRQChr17g0560211' => 'han', 'Haze_02108' => 'cav', 'Haze_02428' => 'cav', 'Haze_05593' => 'cav', 'Haze_06448' => 'cav', 'Haze_09427' => 'cav', 'Haze_12022' => 'cav', 'Haze_17612' => 'cav', 'Haze_17928' => 'cav', 'Hma1.2p1_0032F.1_g019250' => 'hma', 'Hma1.2p1_0163F.1_g072690' => 'hma', 'Hma1.2p1_0265F.1_g106710' => 'hma', 'Hma1.2p1_0286F.1_g113970' => 'hma', 'Hma1.2p1_0363F.1_g136640' => 'hma', 'Hma1.2p1_0584F.1_g183470' => 'hma', 'Hma1.2p1_0885F.1_g232570' => 'hma', 'HPP92_006022' => 'vpl', 'HPP92_007320' => 'vpl', 'HPP92_011521' => 'vpl', 'HPP92_019387' => 'vpl', 'HPP92_024038' => 'vpl', 'Hund05891' => 'sun', 'Hund06450' => 'sun', 'Hund12053' => 'sun', 'Hund16800' => 'sun', 'Hund21222' => 'sun', 'Hund22896' => 'sun', 'Hund23746' => 'sun', 'Hund27083' => 'sun', 'Lalb_Chr02g0141831' => 'lal', 'Lalb_Chr02g0141841' => 'lal', 'Lalb_Chr05g0220411' => 'lal', 'Lalb_Chr06g0162081' => 'lal', 'Lalb_Chr09g0327651' => 'lal', 'Lalb_Chr13g0295051' => 'lal', 'Lalb_Chr15g0086801' => 'lal', 'Lalb_Chr16g0383781' => 'lal', 'Lalb_Chr16g0383791' => 'lal', 'Lalb_Chr18g0055441' => 'lal', 'Lalb_Chr18g0059611' => 'lal', 'Lalb_Chr20g0109661' => 'lal', 'Lalb_Chr20g0109831' => 'lal', 'Lalb_Chr20g0121871' => 'lal', 'Lalb_Chr22g0355361' => 'lal', 'Lalb_Chr25g0286371' => 'lal', 'Lj1A1187G43' => 'lonja', 'Lj1A1205T50' => 'lonja', 'Lj1A800G33' => 'lonja', 'Lj1C1187T7' => 'lonja', 'Lj1C843T11' => 'lonja', 'Lj1g0010940' => 'lja', 'Lj2A288T69' => 'lonja', 'Lj3g0024276' => 'lja', 'Lj4A47T76' => 'lonja', 'Lj4g0005805' => 'lja', 'Lj4g0006097' => 'lja', 'Lj4g0008528' => 'lja', 'Lj4g0024907' => 'lja', 'Lj5g0012472' => 'lja', 'Lj5g0018648' => 'lja', 'Lj6C789G1' => 'lonja', 'Lj6g0004000' => 'lja', 'Lj7A292G67' => 'lonja', 'Lj7A292T64' => 'lonja', 'Lj9A400T58' => 'lonja', 'Lsat_1_v5_gn_1_126181' => 'lsa', 'Lsat_1_v5_gn_4_123041' => 'lsa', 'Lsat_1_v5_gn_4_133620' => 'lsa', 'Lsat_1_v5_gn_4_53221' => 'lsa', 'Lsat_1_v5_gn_4_71961' => 'lsa', 'Lsat_1_v5_gn_7_105241' => 'lsa', 'Lsat_1_v5_gn_7_21361' => 'lsa', 'Lsat_1_v5_gn_7_28860' => 'lsa', 'Lsat_1_v5_gn_7_31260' => 'lsa', 'Lsat_1_v5_gn_8_52801' => 'lsa', 'Manes.02G191400' => 'mes', 'Manes.03G110100' => 'mes', 'Manes.04G071100' => 'mes', 'Manes.05G100500' => 'mes', 'Manes.05G164700' => 'mes', 'Manes.15G087000' => 'mes', 'Manes.15G121500' => 'mes', 'Manes.16G028300' => 'mes', 'Manes.17G046100' => 'mes', 'Manes.17G069800' => 'mes', 'Manes.18G100500' => 'mes', 'Mapoly0002s0109' => 'mpo', 'Mapoly0024s0007' => 'mpo', 'Mapoly0089s0032' => 'mpo', 'MBI04_g42241_MAGBIO' => 'mbi', 'MBI05_g11988_MAGBIO' => 'mbi', 'MBI05_g35452_MAGBIO' => 'mbi', 'MBI07_g30179_MAGBIO' => 'mbi', 'MBI07_g35859_MAGBIO' => 'mbi', 'MBI07_g35860_MAGBIO' => 'mbi', 'MBI07_g37166_MAGBIO' => 'mbi', 'MBI08_g18172_MAGBIO' => 'mbi', 'MBI09_g08441_MAGBIO' => 'mbi', 'MBI13_g01676_MAGBIO' => 'mbi', 'MBI14_g42955_MAGBIO' => 'mbi', 'MBI16_g13161_MAGBIO' => 'mbi', 'MBI17_g27204_MAGBIO' => 'mbi', 'MBI19_g21595_MAGBIO' => 'mbi', 'MD00G1148400' => 'mdo', 'MD02G1301200' => 'mdo', 'MD03G1227800' => 'mdo', 'MD05G1041100' => 'mdo', 'MD05G1124800' => 'mdo', 'MD05G1284000' => 'mdo', 'MD05G1338800' => 'mdo', 'MD05G1338900' => 'mdo', 'MD07G1022800' => 'mdo', 'MD10G1047500' => 'mdo', 'MD10G1127500' => 'mdo', 'MD10G1262300' => 'mdo', 'MD10G1293800' => 'mdo', 'MD16G1074300' => 'mdo', 'Medtr1g021670' => 'mtr', 'Medtr1g096320' => 'mtr', 'Medtr2g013690' => 'mtr', 'Medtr2g019450' => 'mtr', 'Medtr2g085170' => 'mtr', 'Medtr4g088785' => 'mtr', 'Medtr8g055930' => 'mtr', 'Medtr8g085850' => 'mtr', 'MELO3C002605.2' => 'cme', 'MELO3C003891.2' => 'cme', 'MELO3C004012.2' => 'cme', 'MELO3C007134.2' => 'cme', 'MELO3C008118.2' => 'cme', 'MELO3C016700.2' => 'cme', 'MELO3C024127.2' => 'cme', 'MELO3C033361.2' => 'cme', 'MELO3C033362.2' => 'cme', 'Migut.C00430' => 'egut', 'Migut.C01246' => 'egut', 'Migut.E00101' => 'egut', 'Migut.H01486' => 'egut', 'Migut.H01939' => 'egut', 'Migut.K00360' => 'egut', 'Migut.M00910' => 'egut', 'Migut.M01139' => 'egut', 'Migut.N02677' => 'egut', 'MSTRG.13252' => 'ama', 'MSTRG.14701' => 'ama', 'MSTRG.1521' => 'ama', 'MSTRG.15884' => 'ama', 'MSTRG.16242' => 'ama', 'MSTRG.22285' => 'ama', 'MSTRG.22444' => 'ama', 'MSTRG.2349' => 'ama', 'MSTRG.26308' => 'ama', 'MSTRG.28296' => 'ama', 'MSTRG.9895' => 'ama', 'Nitab4.5_0000110g0060' => 'nta', 'Nitab4.5_0000420g0130' => 'nta', 'Nitab4.5_0000422g0030' => 'nta', 'Nitab4.5_0000560g0180' => 'nta', 'Nitab4.5_0000703g0100' => 'nta', 'Nitab4.5_0000786g0200' => 'nta', 'Nitab4.5_0001336g0020' => 'nta', 'Nitab4.5_0001796g0030' => 'nta', 'Nitab4.5_0003348g0060' => 'nta', 'Nitab4.5_0003698g0040' => 'nta', 'Nitab4.5_0003942g0090' => 'nta', 'Nitab4.5_0004775g0070' => 'nta', 'Nitab4.5_0004864g0030' => 'nta', 'Nitab4.5_0005615g0020' => 'nta', 'Nitab4.5_0009288g0030' => 'nta', 'Nitab4.5_0009341g0010' => 'nta', 'Nitab4.5_0009535g0010' => 'nta', 'Nn1g03995' => 'nnu', 'Nn1g04100' => 'nnu', 'Nn1g06530' => 'nnu', 'Nn3g16404' => 'nnu', 'Nn3g17212' => 'nnu', 'Nn3g20776' => 'nnu', 'Nn3g21923' => 'nnu', 'Nn5g27737' => 'nnu', 'Nn5g29461' => 'nnu', 'Nn7g38355' => 'nnu', 'Nn8g39873' => 'nnu', 'Oeu000548.2' => 'oeu', 'Oeu004672.1' => 'oeu', 'Oeu015605.2' => 'oeu', 'Oeu016092.1' => 'oeu', 'Oeu017879.3' => 'oeu', 'Oeu024910.1' => 'oeu', 'Oeu028965.1' => 'oeu', 'Oeu031269.1' => 'oeu', 'Oeu031270.1' => 'oeu', 'Oeu032535.1' => 'oeu', 'Oeu034151.1' => 'oeu', 'Oeu034152.1' => 'oeu', 'Oeu034588.2' => 'oeu', 'Oeu050846.1' => 'oeu', 'Oeu050849.2' => 'oeu', 'Oeu051063.2' => 'oeu', 'Oeu052368.1' => 'oeu', 'Oeu052370.1' => 'oeu', 'Os01g0210400' => 'osa', 'Os01g0304300' => 'osa', 'Os01g0749100' => 'osa', 'Os02g0745800' => 'osa', 'Os03g0769050' => 'osa', 'Os05g0531500' => 'osa', 'Os06g0724300' => 'osa', 'Os11g0198100' => 'osa', 'Peaxi162Scf00069g01425' => 'pax', 'Peaxi162Scf00280g00811' => 'pax', 'Peaxi162Scf00310g00615' => 'pax', 'Peaxi162Scf00362g00542' => 'pax', 'Peaxi162Scf00461g00310' => 'pax', 'Peaxi162Scf00530g00118' => 'pax', 'Peaxi162Scf00541g00057' => 'pax', 'Peaxi162Scf00661g00017' => 'pax', 'Peaxi162Scf00926g00027' => 'pax', 'Peaxi162Scf01064g00263' => 'pax', 'Peaxi162Scf01211g00135' => 'pax', 'PGR004G2336' => 'pgr', 'PGR042G0327' => 'pgr', 'PGR042G1957' => 'pgr', 'PGR042G2003' => 'pgr', 'PGR042G3929' => 'pgr', 'PGR083G1137' => 'pgr', 'PGR083G1364' => 'pgr', 'PGSC0003DMG400003381' => 'stu', 'PGSC0003DMG400003417' => 'stu', 'PGSC0003DMG400008981' => 'stu', 'PGSC0003DMG400012417' => 'stu', 'PGSC0003DMG400012823' => 'stu', 'PGSC0003DMG400016885' => 'stu', 'PGSC0003DMG400022812' => 'stu', 'PGSC0003DMG400029726' => 'stu', 'PGSC0003DMG401009243' => 'stu', 'PGSC0003DMG401031505' => 'stu', 'PGSC0003DMG402031505' => 'stu', 'Phvul.001G017600' => 'pvu', 'Phvul.002G193500' => 'pvu', 'Phvul.002G228900' => 'pvu', 'Phvul.002G236800' => 'pvu', 'Phvul.003G049500' => 'pvu', 'Phvul.005G072000' => 'pvu', 'Phvul.006G164800' => 'pvu', 'Phvul.006G185100' => 'pvu', 'Phvul.007G090000' => 'pvu', 'Potri.001G399800' => 'ptr', 'Potri.002G149900' => 'ptr', 'Potri.004G044100' => 'ptr', 'Potri.004G177600' => 'ptr', 'Potri.009G138000' => 'ptr', 'Potri.010G094000' => 'ptr', 'Potri.011G053000' => 'ptr', 'Potri.011G119300' => 'ptr', 'Potri.013G113700' => 'ptr', 'Potri.018G107800' => 'ptr', 'Potri.019G084100' => 'ptr', 'Pp3c14_23720' => 'ppa', 'Pp3c16_6340' => 'ppa', 'Pp3c23_13420' => 'ppa', 'Pp3c24_2740' => 'ppa', 'Pp3c25_860' => 'ppa', 'Pp3c8_21750' => 'ppa', 'Prupe.1G273000' => 'ppe', 'Prupe.1G273700' => 'ppe', 'Prupe.1G274100' => 'ppe', 'Prupe.2G023300' => 'ppe', 'Prupe.4G048000' => 'ppe', 'Prupe.4G080400' => 'ppe', 'Prupe.4G181200' => 'ppe', 'Prupe.8G056900' => 'ppe', 'Prupe.8G168700' => 'ppe', 'Psat1g189080' => 'psa', 'Psat1g204760' => 'psa', 'Psat4g175560' => 'psa', 'Psat4g177720' => 'psa', 'Psat5g244240' => 'psa', 'Psat6g010720' => 'psa', 'Psat6g187200' => 'psa', 'Psat7g072040' => 'psa', 'PSO017G3501' => 'pso', 'PSO063G2148' => 'pso', 'PSO063G5608' => 'pso', 'PSO210G6392' => 'pso', 'PSO541G2319' => 'pso', 'PSO541G2836' => 'pso', 'PSO541G4012' => 'pso', 'PSO541G6253' => 'pso', 'PSO675G0580' => 'pso', 'PSO675G0856' => 'pso', 'PSO675G5635' => 'pso', 'PSO675G9157' => 'pso', 'PSO832G1660' => 'pso', 'PSO832G1969' => 'pso', 'QL02p007186' => 'qlo', 'QL02p033904' => 'qlo', 'QL03p064391' => 'qlo', 'QL05p040593' => 'qlo', 'QL05p058242' => 'qlo', 'QL08p021825' => 'qlo', 'QL11p004981' => 'qlo', 'RcHm_v2.0_Chr1g0318301' => 'rch', 'RcHm_v2.0_Chr4g0418501' => 'rch', 'RcHm_v2.0_Chr4g0439971' => 'rch', 'RcHm_v2.0_Chr5g0008541' => 'rch', 'RcHm_v2.0_Chr5g0014101' => 'rch', 'RcHm_v2.0_Chr5g0014131' => 'rch', 'RcHm_v2.0_Chr5g0033621' => 'rch', 'RcHm_v2.0_Chr6g0272041' => 'rch', 'RcHm_v2.0_Chr6g0278831' => 'rch', 'Rhsim02G0130400' => 'rsi', 'Rhsim02G0171100' => 'rsi', 'Rhsim05G0053000' => 'rsi', 'Rhsim05G0053100' => 'rsi', 'Rhsim06G0096500' => 'rsi', 'Rhsim06G0096600' => 'rsi', 'Rhsim06G0199100' => 'rsi', 'Rhsim12G0062300' => 'rsi', 'Rhsim12G0062800' => 'rsi', 'Sabra02G0118600' => 'sbr', 'Sabra04G0027300' => 'sbr', 'Sabra04G0119500' => 'sbr', 'Sabra08G0112500' => 'sbr', 'Sabra11G0036800' => 'sbr', 'Sabra11G0103800' => 'sbr', 'Sabra13G0096300' => 'sbr', 'Sabra16G0262300' => 'sbr', 'Sabra18G0091700' => 'sbr', 'Sabra19G0095400' => 'sbr', 'SalBow6G3080' => 'sbo', 'SalBow7G1157' => 'sbo', 'SalBow7G2123' => 'sbo', 'SalBow7G2285' => 'sbo', 'SalBow7G3537' => 'sbo', 'SalBow8G2947' => 'sbo', 'SalBow8G4463' => 'sbo', 'SalBow8G5466' => 'sbo', 'Sc01g0001750' => 'sci', 'Sc02g0006640' => 'sci', 'Sc02g0006670' => 'sci', 'Sc04g0008220' => 'sci', 'Sc05g0006190' => 'sci', 'Sc08g0002760' => 'sci', 'Sc17g0006170' => 'sci', 'Sc22g0002050' => 'sci', 'Sc23g0001190' => 'sci', 'Sc24g0000980' => 'sci', 'Sed0006245' => 'sed', 'Sed0007543' => 'sed', 'Sed0009411' => 'sed', 'Sed0010765' => 'sed', 'Sed0012944' => 'sed', 'Sed0014682' => 'sed', 'Sed0016174' => 'sed', 'Sed0016796' => 'sed', 'Sed0020317' => 'sed', 'Sed0021467' => 'sed', 'SEGI_01316' => 'sgi', 'SEGI_03374' => 'sgi', 'SEGI_16265' => 'sgi', 'SEGI_18569' => 'sgi', 'SEGI_20351' => 'sgi', 'SEGI_26395' => 'sgi', 'SEGI_29469' => 'sgi', 'SEGI_34771' => 'sgi', 'SEGI_36769' => 'sgi', 'SEGI_37139' => 'sgi', 'SGA_v2.0_scaffold100G29687' => 'sas', 'SGA_v2.0_scaffold118G32472' => 'sas', 'SGA_v2.0_scaffold14G07051' => 'sas', 'SGA_v2.0_scaffold183G39845' => 'sas', 'SGA_v2.0_scaffold1G00174' => 'sas', 'SGA_v2.0_scaffold22G09714' => 'sas', 'SGA_v2.0_scaffold333G48992' => 'sas', 'SGA_v2.0_scaffold46G17491' => 'sas', 'SGA_v2.0_scaffold49G18294' => 'sas', 'SGA_v2.0_scaffold63G21658' => 'sas', 'SHI01741' => 'shi', 'SHI05771' => 'shi', 'SHI18077' => 'shi', 'SHI20525' => 'shi', 'SHI20527' => 'shi', 'SHI20528' => 'shi', 'SMO172G0185' => 'smo', 'SMO198G0020' => 'smo', 'SMO351G0006' => 'smo', 'SMO356G0118' => 'smo', 'SMO358G0296' => 'smo', 'SMO367G0079' => 'smo', 'SMO367G1277' => 'smo', 'Solyc01g014220.3' => 'sly', 'Solyc01g111770.2' => 'sly', 'Solyc02g078180.3' => 'sly', 'Solyc03g006430.3' => 'sly', 'Solyc03g006456.1' => 'sly', 'Solyc03g079860.2' => 'sly', 'Solyc04g079770.3' => 'sly', 'Solyc05g007430.4' => 'sly', 'Solyc07g063150.3' => 'sly', 'Solyc08g016620.3' => 'sly', 'Solyc09g057590.3' => 'sly', 'Solyc09g057600.1' => 'sly', 'Solyc10g009050.3' => 'sly', 'Solyc11g017420.2' => 'sly', 'Sopen01g053810' => 'spe', 'Sopen02g023040' => 'spe', 'Sopen03g002440' => 'spe', 'Sopen04g033350' => 'spe', 'Sopen05g003310' => 'spe', 'Sopen07g004050' => 'spe', 'Sopen07g031340' => 'spe', 'Sopen08g006990' => 'spe', 'Sopen10g004830' => 'spe', 'Sopen11g009370' => 'spe', 'Sp1g24450' => 'spa', 'Sp1g29670' => 'spa', 'Sp1g39600' => 'spa', 'Sp2g11080' => 'spa', 'Sp2g13970' => 'spa', 'Sp4g16130' => 'spa', 'Sp6g13080' => 'spa', 'Sp7g37270' => 'spa', 'TAR371G0065' => 'tar', 'TAR376G0340' => 'tar', 'TAR376G0435' => 'tar', 'TAR381G0002' => 'tar', 'TAR381G1236' => 'tar', 'TAR624G0055' => 'tar', 'TAR624G0324' => 'tar', 'TAR624G0696' => 'tar', 'TAR624G0906' => 'tar', 'TAR625G0107' => 'tar', 'TAR626G0015' => 'tar', 'TAR626G1356' => 'tar', 'TAR627G0888' => 'tar', 'TAR628G0399' => 'tar', 'TAR628G1327' => 'tar', 'TAR629G2831' => 'tar', 'TAR629G2874' => 'tar', 'TAR633G1432' => 'tar', 'TAR633G2771' => 'tar', 'THA.LOC104803394' => 'tha', 'THA.LOC104805153' => 'tha', 'THA.LOC104806784' => 'tha', 'THA.LOC104810473' => 'tha', 'THA.LOC104813100' => 'tha', 'THA.LOC104814215' => 'tha', 'THA.LOC104815554' => 'tha', 'THA.LOC104820544' => 'tha', 'THA.LOC104824754' => 'tha', 'THA.LOC104827717' => 'tha', 'Thecc.02G031400' => 'tca', 'Thecc.02G055900' => 'tca', 'Thecc.02G350800' => 'tca', 'Thecc.06G150900' => 'tca', 'Thecc.06G186600' => 'tca', 'Thecc.07G089600' => 'tca', 'Thecc.08G020400' => 'tca', 'Thecc.08G182100' => 'tca', 'Thhalv10000873m.g' => 'esa', 'Thhalv10004185m.g' => 'esa', 'Thhalv10006981m.g' => 'esa', 'Thhalv10007204m.g' => 'esa', 'Thhalv10011374m.g' => 'esa', 'Thhalv10013482m.g' => 'esa', 'Thhalv10017801m.g' => 'esa', 'Thhalv10024983m.g' => 'esa', 'TPR.G12072' => 'tpr', 'TPR.G15769' => 'tpr', 'TPR.G16504' => 'tpr', 'TPR.G16506' => 'tpr', 'TPR.G24345' => 'tpr', 'TPR.G26666' => 'tpr', 'TPR.G27320' => 'tpr', 'TPR.G31819' => 'tpr', 'TPR.G38879' => 'tpr', 'TPR.G39015' => 'tpr', 'TPR.G8819' => 'tpr', 'TWI09G0924' => 'twi', 'TWI12G0811' => 'twi', 'TWI12G1294' => 'twi', 'TWI31G0150' => 'twi', 'TWI36G1262' => 'twi', 'TWI38G1287' => 'twi', 'TWI38G1633' => 'twi', 'TWI38G1982' => 'twi', 'TWI39G0116' => 'twi', 'TWI60G1011' => 'twi', 'TWI63G0171' => 'twi', 'TWI73G0839' => 'twi', 'TWI79G1511' => 'twi', 'unitig_0.g915' => 'ugi', 'unitig_0.g916' => 'ugi', 'unitig_21.g20219' => 'ugi', 'unitig_21.g20416' => 'ugi', 'unitig_578.g16132' => 'ugi', 'unitig_578.g16718' => 'ugi', 'unitig_62.g23481' => 'ugi', 'unitig_744.g24535' => 'ugi', 'unitig_749.g13525' => 'ugi', 'vmacro01248' => 'vma', 'vmacro02290' => 'vma', 'vmacro10946' => 'vma', 'vmacro11865' => 'vma', 'vmacro12493' => 'vma', 'vmacro17322' => 'vma', 'vmacro21599' => 'vma', 'vmacro23041' => 'vma', 'VMungo0251G0004' => 'vmu', 'VMungo0251G2639' => 'vmu', 'VMungo0251G2967' => 'vmu', 'VMungo0540G0864' => 'vmu', 'VMungo0540G1569' => 'vmu', 'VMungo0647G0317' => 'vmu', 'VMungo0720G1373' => 'vmu', 'VMungo0720G1508' => 'vmu', 'VMungo1080G0485' => 'vmu', 'VMungo1215G3177' => 'vmu', 'Zm00001eb112600' => 'zma', 'Zm00001eb120220' => 'zma', 'Zm00001eb153240' => 'zma', 'Zm00001eb168880' => 'zma', 'Zm00001eb213920' => 'zma', 'Zm00001eb228280' => 'zma', 'Zm00001eb254580' => 'zma', 'Zm00001eb272180' => 'zma', 'Zm00001eb293190' => 'zma', 'Zm00001eb322930' => 'zma', 'Zm00001eb353360' => 'zma', 'Zm00001eb353390' => 'zma', 'Zm00001eb353430' => 'zma', 'Zm00001eb353440' => 'zma', 'Zm00001eb353780' => 'zma' ), 'gf_id' => 'HOM05D000499', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000499' ), 'data_identifier' => 'HOM05D000499', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000499', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1066', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p29780' => 'bna', 'A02p33180' => 'bna', 'A03p16470' => 'bna', 'A03p66010' => 'bna', 'A04p25970' => 'bna', 'A06p01270' => 'bna', 'A06p46080' => 'bna', 'A07p11400' => 'bna', 'A08p01840' => 'bna', 'A08p08230' => 'bna', 'A08p25740' => 'bna', 'A09p32070' => 'bna', 'A09p37830' => 'bna', 'A09p42840' => 'bna', 'A09p42850' => 'bna', 'Aa31LG10G2060' => 'aar', 'Aa31LG2G7410' => 'aar', 'Aa31LG6G10200' => 'aar', 'Aa31LG6G16680' => 'aar', 'Aa31LG6G8470' => 'aar', 'Aa31LG9G12730' => 'aar', 'Aa31LG9G13680' => 'aar', 'Aa31LG9G14920' => 'aar', 'Aa31LG9G6650' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4977' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5467' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3254' => 'aag', 'Actinidia02578' => 'ach', 'Actinidia07693' => 'ach', 'Actinidia08413' => 'ach', 'Actinidia08414' => 'ach', 'Actinidia15289' => 'ach', 'Actinidia19871' => 'ach', 'Actinidia21475' => 'ach', 'Actinidia22576' => 'ach', 'Actinidia28327' => 'ach', 'Actinidia32491' => 'ach', 'Actinidia39463' => 'ach', 'Actinidia39571' => 'ach', 'Ah.01g013750' => 'amhyb', 'Ah.01g023210' => 'amhyb', 'Ah.04g164850' => 'amhyb', 'Ah.05g178060' => 'amhyb', 'Ah.07g204270' => 'amhyb', 'Ah.07g208480' => 'amhyb', 'Ah.09g237410' => 'amhyb', 'Ah.14g089460' => 'amhyb', 'AL1G41790' => 'aly', 'AL1G49050' => 'aly', 'AL1G53810' => 'aly', 'AL1G61400' => 'aly', 'AL4G18580' => 'aly', 'AL5G12510' => 'aly', 'AL5G12540' => 'aly', 'AL6G43230' => 'aly', 'AL7G10370' => 'aly', 'AL7G19250' => 'aly', 'AL8G12240' => 'aly', 'AL8G18540' => 'aly', 'Aqoxy1G02409' => 'aox', 'Aqoxy2G03993' => 'aox', 'Aqoxy3G03357' => 'aox', 'Aqoxy4G00785' => 'aox', 'Aqoxy5G02598' => 'aox', 'Aqoxy6G00132' => 'aox', 'Aqoxy7G01776' => 'aox', 'Aqoxy7G02316' => 'aox', 'Aqoxy7G03973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.12AFKW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B8730' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27IQR1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3F75VG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3RE0GA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41TCQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.527VTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FIR39' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5W8UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DA38EV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ63HS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H1I32C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HC27T5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4M8AP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7N3CZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9UVDZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LS1NQA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT1D4B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SKC4TM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCFV76' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF9Q1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQWD9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1ZM88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WE07RT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YCK7VH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJE6Q6' => 'arhy', 'AT1G28240' => 'ath', 'AT1G34550' => 'ath', 'AT1G53040' => 'ath', 'AT2G02910' => 'ath', 'AT4G09630' => 'ath', 'AT4G38500' => 'ath', 'AT5G42660' => 'ath', 'AT5G46220' => 'ath', 'ATR0152G026' => 'atr', 'ATR0564G343' => 'atr', 'ATR0706G151' => 'atr', 'ATR0733G207' => 'atr', 'ATR0751G234' => 'atr', 'ATR0807G048' => 'atr', 'ATR1091G084' => 'atr', 'Atru.chr10.1229' => 'acertr', 'Atru.chr10.1230' => 'acertr', 'Atru.chr10.1874' => 'acertr', 'Atru.chr11.1808' => 'acertr', 'Atru.chr13.1795' => 'acertr', 'Atru.chr13.570' => 'acertr', 'Atru.chr2.2608' => 'acertr', 'Atru.chr2.2609' => 'acertr', 'Atru.chr5.3428' => 'acertr', 'Atru.chr8.1171' => 'acertr', 'AUR62004651' => 'cqu', 'AUR62008675' => 'cqu', 'AUR62010014' => 'cqu', 'AUR62013004' => 'cqu', 'AUR62014825' => 'cqu', 'AUR62015015' => 'cqu', 'AUR62015151' => 'cqu', 'AUR62017020' => 'cqu', 'AUR62019422' => 'cqu', 'AUR62023570' => 'cqu', 'AUR62025571' => 'cqu', 'AUR62029098' => 'cqu', 'AUR62033863' => 'cqu', 'AUR62034296' => 'cqu', 'AUR62040075' => 'cqu', 'BcaB02g07334' => 'bca', 'BcaB02g10575' => 'bca', 'BcaB03g12119' => 'bca', 'BcaB03g12120' => 'bca', 'BcaB03g13945' => 'bca', 'BcaB04g17123' => 'bca', 'BcaB04g17867' => 'bca', 'BcaB04g19839' => 'bca', 'BcaB07g30317' => 'bca', 'BcaB07g32432' => 'bca', 'BcaB07g33362' => 'bca', 'BcaB08g36611' => 'bca', 'BcaC01g00028' => 'bca', 'BcaC01g01356' => 'bca', 'BcaC01g02034' => 'bca', 'BcaC01g06051' => 'bca', 'BcaC03g16839' => 'bca', 'BcaC03g17176' => 'bca', 'BcaC05g26829' => 'bca', 'BcaC06g31490' => 'bca', 'BcaC06g35344' => 'bca', 'BcaC06g36570' => 'bca', 'BcaC07g37537' => 'bca', 'BcaC08g43491' => 'bca', 'BcaC08g43773' => 'bca', 'BcaNung00234' => 'bca', 'BcaNung01982' => 'bca', 'BcaNung03707' => 'bca', 'BcaNung06454' => 'bca', 'BolC2t10762H' => 'bol', 'BolC2t11191H' => 'bol', 'BolC3t14322H' => 'bol', 'BolC3t19747H' => 'bol', 'BolC3t21425H' => 'bol', 'BolC4t27800H' => 'bol', 'BolC5t31423H' => 'bol', 'BolC6t35951H' => 'bol', 'BolC6t36282H' => 'bol', 'BolC7t40678H' => 'bol', 'BolC7t40679H' => 'bol', 'BolC7t42222H' => 'bol', 'BolC7t43492H' => 'bol', 'BolC7t46785H' => 'bol', 'BolC8t47853H' => 'bol', 'BolC9t56805H' => 'bol', 'BraA02t08000Z' => 'bra', 'BraA02t08341Z' => 'bra', 'BraA03t10936Z' => 'bra', 'BraA03t15657Z' => 'bra', 'BraA04t18100Z' => 'bra', 'BraA05t20523Z' => 'bra', 'BraA06t23353Z' => 'bra', 'BraA06t27473Z' => 'bra', 'BraA06t27769Z' => 'bra', 'BraA07t28928Z' => 'bra', 'BraA08t32236Z' => 'bra', 'BraA08t32841Z' => 'bra', 'BraA08t34524Z' => 'bra', 'BraA09t38742Z' => 'bra', 'BraA09t39295Z' => 'bra', 'C02p47180' => 'bna', 'C02p50990' => 'bna', 'C03p19360' => 'bna', 'C03p74950' => 'bna', 'C03p91000' => 'bna', 'C04p63260' => 'bna', 'C05p27050' => 'bna', 'C06p08750' => 'bna', 'C06p11490' => 'bna', 'C07p02820' => 'bna', 'C07p17180' => 'bna', 'C07p29440' => 'bna', 'C07p63730' => 'bna', 'C09p39260' => 'bna', 'CAN.G1164.34' => 'can', 'CAN.G1164.39' => 'can', 'CAN.G1530.3' => 'can', 'CAN.G162.61' => 'can', 'CAN.G176.6' => 'can', 'CAN.G289.49' => 'can', 'CAN.G370.21' => 'can', 'CAN.G370.22' => 'can', 'CAN.G371.117' => 'can', 'CAN.G58.37' => 'can', 'CAN.G588.98' => 'can', 'CANSAT21G2266' => 'cansat', 'CANSAT25G2799' => 'cansat', 'CANSAT35G0862' => 'cansat', 'CANSAT35G1704' => 'cansat', 'CANSAT35G1760' => 'cansat', 'CANSAT56G3971' => 'cansat', 'CANSAT56G4116' => 'cansat', 'CANSAT80G1259' => 'cansat', 'CARHR027730' => 'chi', 'CARHR033880' => 'chi', 'CARHR043270' => 'chi', 'CARHR145330' => 'chi', 'CARHR145340' => 'chi', 'CARHR175570' => 'chi', 'CARHR181570' => 'chi', 'CARHR258470' => 'chi', 'CARHR260490' => 'chi', 'CARHR294220' => 'chi', 'Carub.0001s2668' => 'cru', 'Carub.0001s3257' => 'cru', 'Carub.0001s4220' => 'cru', 'Carub.0005s0179' => 'cru', 'Carub.0006s2807' => 'cru', 'Carub.0007s0039' => 'cru', 'Carub.0008s0169' => 'cru', 'Carub.0008s0636' => 'cru', 'Ca_00338_v3' => 'car', 'Ca_00542_v3' => 'car', 'Ca_01844_v3' => 'car', 'Ca_10611_v3' => 'car', 'Ca_13326_v3' => 'car', 'Ca_17944_v3' => 'car', 'Ca_18546_v3' => 'car', 'Ca_24219_v3' => 'car', 'Ca_29972_v3' => 'car', 'CBR_g3681' => 'cbr', 'CBR_g40021' => 'cbr', 'Cc01_g08140' => 'ccan', 'Cc02_g13410' => 'ccan', 'Cc02_g37480' => 'ccan', 'Cc05_g12030' => 'ccan', 'Cc09_g03370' => 'ccan', 'Cc09_g10300' => 'ccan', 'Cc10_g03530' => 'ccan', 'Cc10_g11380' => 'ccan', 'CDE01G0176' => 'cde', 'CDE02G0675' => 'cde', 'CDE02G0942' => 'cde', 'CDE02G1153' => 'cde', 'CDE02G4177' => 'cde', 'CDE04G2117' => 'cde', 'CDE04G2736' => 'cde', 'CDE08G1161' => 'cde', 'CDE09G1238' => 'cde', 'Cfa000467' => 'cfa', 'Cfa000947' => 'cfa', 'Cfa004969' => 'cfa', 'Cfa005284' => 'cfa', 'Cfa008993' => 'cfa', 'Cfa018187' => 'cfa', 'Cfa018454' => 'cfa', 'Cfa020585' => 'cfa', 'Ciclev10000424m.g' => 'ccl', 'Ciclev10003605m.g' => 'ccl', 'Ciclev10007828m.g' => 'ccl', 'Ciclev10014620m.g' => 'ccl', 'Ciclev10015169m.g' => 'ccl', 'Ciclev10018291m.g' => 'ccl', 'Ciclev10028256m.g' => 'ccl', 'Ciclev10033822m.g' => 'ccl', 'CiPaw.05G060300' => 'cil', 'CiPaw.05G085000' => 'cil', 'CiPaw.06G083700' => 'cil', 'CiPaw.06G120300' => 'cil', 'CiPaw.09G060500' => 'cil', 'CiPaw.09G123800' => 'cil', 'CiPaw.11G169700' => 'cil', 'CiPaw.12G118300' => 'cil', 'CiPaw.15G071000' => 'cil', 'CiPaw.15G081900' => 'cil', 'ClCG01G024610' => 'cla', 'ClCG03G006070' => 'cla', 'ClCG05G019250' => 'cla', 'ClCG09G009500' => 'cla', 'ClCG11G008200' => 'cla', 'ClCG11G018080' => 'cla', 'COL.COLO4_17373' => 'col', 'COL.COLO4_22994' => 'col', 'COL.COLO4_26389' => 'col', 'COL.COLO4_27170' => 'col', 'COL.COLO4_31074' => 'col', 'COL.COLO4_31465' => 'col', 'COL.COLO4_36438' => 'col', 'COL.COLO4_36439' => 'col', 'Cpa.g.c38781' => 'cpa', 'Cpa.g.sc128.12' => 'cpa', 'Cpa.g.sc166.7' => 'cpa', 'Cpa.g.sc166.8' => 'cpa', 'Cpa.g.sc20.111' => 'cpa', 'Cpa.g.sc27.31' => 'cpa', 'Cpa.g.sc64.36' => 'cpa', 'Cpa.g.sc64.37' => 'cpa', 'Cpa.g.sc66.49' => 'cpa', 'Cpa.g.sc80.64' => 'cpa', 'CsaV3_1G012320' => 'csa', 'CsaV3_2G008480' => 'csa', 'CsaV3_2G033450' => 'csa', 'CsaV3_3G044830' => 'csa', 'CsaV3_4G033710' => 'csa', 'CsaV3_6G051730' => 'csa', 'CsaV3_7G025350' => 'csa', 'CSS0001067' => 'camsi', 'CSS0005996' => 'camsi', 'CSS0006590' => 'camsi', 'CSS0009673' => 'camsi', 'CSS0010201' => 'camsi', 'CSS0010549' => 'camsi', 'CSS0011364' => 'camsi', 'CSS0014473' => 'camsi', 'CSS0014961' => 'camsi', 'CSS0020191' => 'camsi', 'CSS0021165' => 'camsi', 'CSS0022306' => 'camsi', 'CSS0030591' => 'camsi', 'CSS0030696' => 'camsi', 'CSS0032653' => 'camsi', 'CSS0037487' => 'camsi', 'CSS0041102' => 'camsi', 'CSS0041261' => 'camsi', 'CSS0046246' => 'camsi', 'CSS0049256' => 'camsi', 'DCAR_004075' => 'dca', 'DCAR_011538' => 'dca', 'DCAR_019553' => 'dca', 'DCAR_020952' => 'dca', 'DCAR_021739' => 'dca', 'DCAR_027407' => 'dca', 'DCAR_027913' => 'dca', 'DCAR_028066' => 'dca', 'Dinv05899' => 'din', 'Dinv07563' => 'din', 'Dinv08010' => 'din', 'Dinv14125' => 'din', 'Dinv20172' => 'din', 'Dinv30743' => 'din', 'Dinv31229' => 'din', 'Dinv34162' => 'din', 'Dinv36028' => 'din', 'Dinv39368' => 'din', 'Dinv40565' => 'din', 'Dinv41706' => 'din', 'Duzib052G0089' => 'dzi', 'Duzib116G0641' => 'dzi', 'Duzib132G0069' => 'dzi', 'Duzib132G1219' => 'dzi', 'Duzib147G0278' => 'dzi', 'Duzib160G0480' => 'dzi', 'Duzib170G0661' => 'dzi', 'Duzib177G0591' => 'dzi', 'Duzib187G1353' => 'dzi', 'Duzib192G0858' => 'dzi', 'Duzib192G0883' => 'dzi', 'Duzib213G0506' => 'dzi', 'Duzib235G0289' => 'dzi', 'Duzib251G0422' => 'dzi', 'ECA232G3898' => 'eca', 'ECA233G5950' => 'eca', 'ECA234G1699' => 'eca', 'ECA234G2421' => 'eca', 'ECA236G0426' => 'eca', 'ECA236G4331' => 'eca', 'ECA248G2573' => 'eca', 'EL10Ac1g00077' => 'bvu', 'EL10Ac1g01746' => 'bvu', 'EL10Ac2g03464' => 'bvu', 'EL10Ac4g08176' => 'bvu', 'EL10Ac7g17521' => 'bvu', 'EL10Ac8g20386' => 'bvu', 'EL10Ac9g21343' => 'bvu', 'EL10Ac9g22688' => 'bvu', 'Eucgr.B03434' => 'egr', 'Eucgr.D00618' => 'egr', 'Eucgr.E02395' => 'egr', 'Eucgr.F01129' => 'egr', 'Eucgr.F02622' => 'egr', 'Eucgr.F04207' => 'egr', 'FAN01G0570' => 'fan', 'FAN03G3351' => 'fan', 'FAN06G3702' => 'fan', 'FAN07G2149' => 'fan', 'FAN10G3758' => 'fan', 'FAN11G1170' => 'fan', 'FAN11G2050' => 'fan', 'FAN11G2724' => 'fan', 'FAN12G1700' => 'fan', 'FAN12G2028' => 'fan', 'FAN15G1160' => 'fan', 'FAN15G3063' => 'fan', 'FAN16G2540' => 'fan', 'FAN16G3077' => 'fan', 'FAN16G3624' => 'fan', 'FAN17G0221' => 'fan', 'FAN20G2492' => 'fan', 'FAN20G2905' => 'fan', 'FAN21G0548' => 'fan', 'FAN21G1300' => 'fan', 'FAN22G0077' => 'fan', 'FAN22G1315' => 'fan', 'FAN24G1280' => 'fan', 'FAN24G1445' => 'fan', 'FAN24G3527' => 'fan', 'FAN25G0464' => 'fan', 'FAN25G2885' => 'fan', 'FAN25G3270' => 'fan', 'FAN27G1101' => 'fan', 'FAN27G2846' => 'fan', 'FAN27G3524' => 'fan', 'FvH4_2g11770' => 'fve', 'FvH4_2g15630' => 'fve', 'FvH4_3g05570' => 'fve', 'FvH4_3g09110' => 'fve', 'FvH4_3g19940' => 'fve', 'FvH4_4g04821' => 'fve', 'FvH4_4g31480' => 'fve', 'FvH4_7g01740' => 'fve', 'Glyma.05G130400' => 'gma', 'Glyma.05G156400' => 'gma', 'Glyma.07G197000' => 'gma', 'Glyma.08G085151' => 'gma', 'Glyma.08G114500' => 'gma', 'Glyma.08G300400' => 'gma', 'Glyma.10G215800' => 'gma', 'Glyma.12G224400' => 'gma', 'Glyma.13G179300' => 'gma', 'Glyma.13G218151' => 'gma', 'Glyma.13G238800' => 'gma', 'Glyma.13G276900' => 'gma', 'Glyma.14G078200' => 'gma', 'Glyma.15G074500' => 'gma', 'Glyma.15G094100' => 'gma', 'Glyma.17G247200' => 'gma', 'Glyma.18G120100' => 'gma', 'Glyma.20G176000' => 'gma', 'Gohir.A01G063600' => 'ghi', 'Gohir.A01G170301' => 'ghi', 'Gohir.A02G060500' => 'ghi', 'Gohir.A05G133850' => 'ghi', 'Gohir.A05G161400' => 'ghi', 'Gohir.A06G012900' => 'ghi', 'Gohir.A06G035901' => 'ghi', 'Gohir.A06G127100' => 'ghi', 'Gohir.A06G210500' => 'ghi', 'Gohir.A08G008650' => 'ghi', 'Gohir.A09G072700' => 'ghi', 'Gohir.A09G088301' => 'ghi', 'Gohir.A10G040600' => 'ghi', 'Gohir.A12G036300' => 'ghi', 'Gohir.A12G143350' => 'ghi', 'Gohir.A12G165500' => 'ghi', 'Gohir.A13G145700' => 'ghi', 'Gohir.D01G050000' => 'ghi', 'Gohir.D01G051366' => 'ghi', 'Gohir.D01G161350' => 'ghi', 'Gohir.D02G065900' => 'ghi', 'Gohir.D05G164200' => 'ghi', 'Gohir.D05G355500' => 'ghi', 'Gohir.D06G010400' => 'ghi', 'Gohir.D06G111250' => 'ghi', 'Gohir.D06G132000' => 'ghi', 'Gohir.D06G210500' => 'ghi', 'Gohir.D07G165675' => 'ghi', 'Gohir.D08G062240' => 'ghi', 'Gohir.D08G086101' => 'ghi', 'Gohir.D08G138060' => 'ghi', 'Gohir.D09G072300' => 'ghi', 'Gohir.D10G041400' => 'ghi', 'Gohir.D11G191020' => 'ghi', 'Gohir.D11G212066' => 'ghi', 'Gohir.D12G036300' => 'ghi', 'Gohir.D12G168600' => 'ghi', 'Gohir.D13G150600' => 'ghi', 'Gorai.001G057300' => 'gra', 'Gorai.002G069900' => 'gra', 'Gorai.002G200000' => 'gra', 'Gorai.003G067600' => 'gra', 'Gorai.005G074800' => 'gra', 'Gorai.006G087300' => 'gra', 'Gorai.008G037500' => 'gra', 'Gorai.008G181400' => 'gra', 'Gorai.009G169400' => 'gra', 'Gorai.009G387900' => 'gra', 'Gorai.010G013300' => 'gra', 'Gorai.010G153800' => 'gra', 'Gorai.010G255800' => 'gra', 'Gorai.011G043700' => 'gra', 'Gorai.011G198900' => 'gra', 'Gorai.013G168400' => 'gra', 'GSVIVG01005212001' => 'vvi', 'GSVIVG01006163001' => 'vvi', 'GSVIVG01009625001' => 'vvi', 'GSVIVG01014338001' => 'vvi', 'GSVIVG01020005001' => 'vvi', 'GSVIVG01021450001' => 'vvi', 'GSVIVG01023975001' => 'vvi', 'GSVIVG01034490001' => 'vvi', 'HanXRQChr04g0112071' => 'han', 'HanXRQChr05g0131151' => 'han', 'HanXRQChr09g0262371' => 'han', 'HanXRQChr09g0268401' => 'han', 'HanXRQChr10g0279241' => 'han', 'HanXRQChr10g0297961' => 'han', 'HanXRQChr11g0326231' => 'han', 'HanXRQChr11g0328471' => 'han', 'HanXRQChr16g0507941' => 'han', 'HanXRQChr17g0560211' => 'han', 'Haze_02108' => 'cav', 'Haze_02428' => 'cav', 'Haze_05593' => 'cav', 'Haze_06448' => 'cav', 'Haze_09427' => 'cav', 'Haze_12022' => 'cav', 'Haze_17612' => 'cav', 'Haze_17928' => 'cav', 'Hma1.2p1_0032F.1_g019250' => 'hma', 'Hma1.2p1_0163F.1_g072690' => 'hma', 'Hma1.2p1_0265F.1_g106710' => 'hma', 'Hma1.2p1_0286F.1_g113970' => 'hma', 'Hma1.2p1_0363F.1_g136640' => 'hma', 'Hma1.2p1_0584F.1_g183470' => 'hma', 'Hma1.2p1_0885F.1_g232570' => 'hma', 'HPP92_006022' => 'vpl', 'HPP92_007320' => 'vpl', 'HPP92_011521' => 'vpl', 'HPP92_019387' => 'vpl', 'HPP92_024038' => 'vpl', 'Hund05891' => 'sun', 'Hund06450' => 'sun', 'Hund12053' => 'sun', 'Hund16800' => 'sun', 'Hund21222' => 'sun', 'Hund22896' => 'sun', 'Hund23746' => 'sun', 'Hund27083' => 'sun', 'Lalb_Chr02g0141831' => 'lal', 'Lalb_Chr02g0141841' => 'lal', 'Lalb_Chr05g0220411' => 'lal', 'Lalb_Chr06g0162081' => 'lal', 'Lalb_Chr09g0327651' => 'lal', 'Lalb_Chr13g0295051' => 'lal', 'Lalb_Chr15g0086801' => 'lal', 'Lalb_Chr16g0383781' => 'lal', 'Lalb_Chr16g0383791' => 'lal', 'Lalb_Chr18g0055441' => 'lal', 'Lalb_Chr18g0059611' => 'lal', 'Lalb_Chr20g0109661' => 'lal', 'Lalb_Chr20g0109831' => 'lal', 'Lalb_Chr20g0121871' => 'lal', 'Lalb_Chr22g0355361' => 'lal', 'Lalb_Chr25g0286371' => 'lal', 'Lj1A1187G43' => 'lonja', 'Lj1A1205T50' => 'lonja', 'Lj1A800G33' => 'lonja', 'Lj1C1187T7' => 'lonja', 'Lj1C843T11' => 'lonja', 'Lj1g0010940' => 'lja', 'Lj2A288T69' => 'lonja', 'Lj3g0024276' => 'lja', 'Lj4A47T76' => 'lonja', 'Lj4g0005805' => 'lja', 'Lj4g0006097' => 'lja', 'Lj4g0008528' => 'lja', 'Lj4g0024907' => 'lja', 'Lj5g0012472' => 'lja', 'Lj5g0018648' => 'lja', 'Lj6C789G1' => 'lonja', 'Lj6g0004000' => 'lja', 'Lj7A292G67' => 'lonja', 'Lj7A292T64' => 'lonja', 'Lj9A400T58' => 'lonja', 'Lsat_1_v5_gn_1_126181' => 'lsa', 'Lsat_1_v5_gn_4_123041' => 'lsa', 'Lsat_1_v5_gn_4_133620' => 'lsa', 'Lsat_1_v5_gn_4_53221' => 'lsa', 'Lsat_1_v5_gn_4_71961' => 'lsa', 'Lsat_1_v5_gn_7_105241' => 'lsa', 'Lsat_1_v5_gn_7_21361' => 'lsa', 'Lsat_1_v5_gn_7_28860' => 'lsa', 'Lsat_1_v5_gn_7_31260' => 'lsa', 'Lsat_1_v5_gn_8_52801' => 'lsa', 'Manes.02G191400' => 'mes', 'Manes.03G110100' => 'mes', 'Manes.04G071100' => 'mes', 'Manes.05G100500' => 'mes', 'Manes.05G164700' => 'mes', 'Manes.15G087000' => 'mes', 'Manes.15G121500' => 'mes', 'Manes.16G028300' => 'mes', 'Manes.17G046100' => 'mes', 'Manes.17G069800' => 'mes', 'Manes.18G100500' => 'mes', 'Mapoly0002s0109' => 'mpo', 'Mapoly0024s0007' => 'mpo', 'Mapoly0089s0032' => 'mpo', 'MBI04_g42241_MAGBIO' => 'mbi', 'MBI05_g11988_MAGBIO' => 'mbi', 'MBI05_g35452_MAGBIO' => 'mbi', 'MBI07_g30179_MAGBIO' => 'mbi', 'MBI07_g35859_MAGBIO' => 'mbi', 'MBI07_g35860_MAGBIO' => 'mbi', 'MBI07_g37166_MAGBIO' => 'mbi', 'MBI08_g18172_MAGBIO' => 'mbi', 'MBI09_g08441_MAGBIO' => 'mbi', 'MBI13_g01676_MAGBIO' => 'mbi', 'MBI14_g42955_MAGBIO' => 'mbi', 'MBI16_g13161_MAGBIO' => 'mbi', 'MBI17_g27204_MAGBIO' => 'mbi', 'MBI19_g21595_MAGBIO' => 'mbi', 'MD00G1148400' => 'mdo', 'MD02G1301200' => 'mdo', 'MD03G1227800' => 'mdo', 'MD05G1041100' => 'mdo', 'MD05G1124800' => 'mdo', 'MD05G1284000' => 'mdo', 'MD05G1338800' => 'mdo', 'MD05G1338900' => 'mdo', 'MD07G1022800' => 'mdo', 'MD10G1047500' => 'mdo', 'MD10G1127500' => 'mdo', 'MD10G1262300' => 'mdo', 'MD10G1293800' => 'mdo', 'MD16G1074300' => 'mdo', 'Medtr1g021670' => 'mtr', 'Medtr1g096320' => 'mtr', 'Medtr2g013690' => 'mtr', 'Medtr2g019450' => 'mtr', 'Medtr2g085170' => 'mtr', 'Medtr4g088785' => 'mtr', 'Medtr8g055930' => 'mtr', 'Medtr8g085850' => 'mtr', 'MELO3C002605.2' => 'cme', 'MELO3C003891.2' => 'cme', 'MELO3C004012.2' => 'cme', 'MELO3C007134.2' => 'cme', 'MELO3C008118.2' => 'cme', 'MELO3C016700.2' => 'cme', 'MELO3C024127.2' => 'cme', 'MELO3C033361.2' => 'cme', 'MELO3C033362.2' => 'cme', 'Migut.C00430' => 'egut', 'Migut.C01246' => 'egut', 'Migut.E00101' => 'egut', 'Migut.H01486' => 'egut', 'Migut.H01939' => 'egut', 'Migut.K00360' => 'egut', 'Migut.M00910' => 'egut', 'Migut.M01139' => 'egut', 'Migut.N02677' => 'egut', 'MSTRG.13252' => 'ama', 'MSTRG.14701' => 'ama', 'MSTRG.1521' => 'ama', 'MSTRG.15884' => 'ama', 'MSTRG.16242' => 'ama', 'MSTRG.22285' => 'ama', 'MSTRG.22444' => 'ama', 'MSTRG.2349' => 'ama', 'MSTRG.26308' => 'ama', 'MSTRG.28296' => 'ama', 'MSTRG.9895' => 'ama', 'Nitab4.5_0000110g0060' => 'nta', 'Nitab4.5_0000420g0130' => 'nta', 'Nitab4.5_0000422g0030' => 'nta', 'Nitab4.5_0000560g0180' => 'nta', 'Nitab4.5_0000703g0100' => 'nta', 'Nitab4.5_0000786g0200' => 'nta', 'Nitab4.5_0001336g0020' => 'nta', 'Nitab4.5_0001796g0030' => 'nta', 'Nitab4.5_0003348g0060' => 'nta', 'Nitab4.5_0003698g0040' => 'nta', 'Nitab4.5_0003942g0090' => 'nta', 'Nitab4.5_0004775g0070' => 'nta', 'Nitab4.5_0004864g0030' => 'nta', 'Nitab4.5_0005615g0020' => 'nta', 'Nitab4.5_0009288g0030' => 'nta', 'Nitab4.5_0009341g0010' => 'nta', 'Nitab4.5_0009535g0010' => 'nta', 'Nn1g03995' => 'nnu', 'Nn1g04100' => 'nnu', 'Nn1g06530' => 'nnu', 'Nn3g16404' => 'nnu', 'Nn3g17212' => 'nnu', 'Nn3g20776' => 'nnu', 'Nn3g21923' => 'nnu', 'Nn5g27737' => 'nnu', 'Nn5g29461' => 'nnu', 'Nn7g38355' => 'nnu', 'Nn8g39873' => 'nnu', 'Oeu000548.2' => 'oeu', 'Oeu004672.1' => 'oeu', 'Oeu015605.2' => 'oeu', 'Oeu016092.1' => 'oeu', 'Oeu017879.3' => 'oeu', 'Oeu024910.1' => 'oeu', 'Oeu028965.1' => 'oeu', 'Oeu031269.1' => 'oeu', 'Oeu031270.1' => 'oeu', 'Oeu032535.1' => 'oeu', 'Oeu034151.1' => 'oeu', 'Oeu034152.1' => 'oeu', 'Oeu034588.2' => 'oeu', 'Oeu050846.1' => 'oeu', 'Oeu050849.2' => 'oeu', 'Oeu051063.2' => 'oeu', 'Oeu052368.1' => 'oeu', 'Oeu052370.1' => 'oeu', 'Os01g0210400' => 'osa', 'Os01g0304300' => 'osa', 'Os01g0749100' => 'osa', 'Os02g0745800' => 'osa', 'Os03g0769050' => 'osa', 'Os05g0531500' => 'osa', 'Os06g0724300' => 'osa', 'Os11g0198100' => 'osa', 'Peaxi162Scf00069g01425' => 'pax', 'Peaxi162Scf00280g00811' => 'pax', 'Peaxi162Scf00310g00615' => 'pax', 'Peaxi162Scf00362g00542' => 'pax', 'Peaxi162Scf00461g00310' => 'pax', 'Peaxi162Scf00530g00118' => 'pax', 'Peaxi162Scf00541g00057' => 'pax', 'Peaxi162Scf00661g00017' => 'pax', 'Peaxi162Scf00926g00027' => 'pax', 'Peaxi162Scf01064g00263' => 'pax', 'Peaxi162Scf01211g00135' => 'pax', 'PGR004G2336' => 'pgr', 'PGR042G0327' => 'pgr', 'PGR042G1957' => 'pgr', 'PGR042G2003' => 'pgr', 'PGR042G3929' => 'pgr', 'PGR083G1137' => 'pgr', 'PGR083G1364' => 'pgr', 'PGSC0003DMG400003381' => 'stu', 'PGSC0003DMG400003417' => 'stu', 'PGSC0003DMG400008981' => 'stu', 'PGSC0003DMG400012417' => 'stu', 'PGSC0003DMG400012823' => 'stu', 'PGSC0003DMG400016885' => 'stu', 'PGSC0003DMG400022812' => 'stu', 'PGSC0003DMG400029726' => 'stu', 'PGSC0003DMG401009243' => 'stu', 'PGSC0003DMG401031505' => 'stu', 'PGSC0003DMG402031505' => 'stu', 'Phvul.001G017600' => 'pvu', 'Phvul.002G193500' => 'pvu', 'Phvul.002G228900' => 'pvu', 'Phvul.002G236800' => 'pvu', 'Phvul.003G049500' => 'pvu', 'Phvul.005G072000' => 'pvu', 'Phvul.006G164800' => 'pvu', 'Phvul.006G185100' => 'pvu', 'Phvul.007G090000' => 'pvu', 'Potri.001G399800' => 'ptr', 'Potri.002G149900' => 'ptr', 'Potri.004G044100' => 'ptr', 'Potri.004G177600' => 'ptr', 'Potri.009G138000' => 'ptr', 'Potri.010G094000' => 'ptr', 'Potri.011G053000' => 'ptr', 'Potri.011G119300' => 'ptr', 'Potri.013G113700' => 'ptr', 'Potri.018G107800' => 'ptr', 'Potri.019G084100' => 'ptr', 'Pp3c14_23720' => 'ppa', 'Pp3c16_6340' => 'ppa', 'Pp3c23_13420' => 'ppa', 'Pp3c24_2740' => 'ppa', 'Pp3c25_860' => 'ppa', 'Pp3c8_21750' => 'ppa', 'Prupe.1G273000' => 'ppe', 'Prupe.1G273700' => 'ppe', 'Prupe.1G274100' => 'ppe', 'Prupe.2G023300' => 'ppe', 'Prupe.4G048000' => 'ppe', 'Prupe.4G080400' => 'ppe', 'Prupe.4G181200' => 'ppe', 'Prupe.8G056900' => 'ppe', 'Prupe.8G168700' => 'ppe', 'Psat1g189080' => 'psa', 'Psat1g204760' => 'psa', 'Psat4g175560' => 'psa', 'Psat4g177720' => 'psa', 'Psat5g244240' => 'psa', 'Psat6g010720' => 'psa', 'Psat6g187200' => 'psa', 'Psat7g072040' => 'psa', 'PSO017G3501' => 'pso', 'PSO063G2148' => 'pso', 'PSO063G5608' => 'pso', 'PSO210G6392' => 'pso', 'PSO541G2319' => 'pso', 'PSO541G2836' => 'pso', 'PSO541G4012' => 'pso', 'PSO541G6253' => 'pso', 'PSO675G0580' => 'pso', 'PSO675G0856' => 'pso', 'PSO675G5635' => 'pso', 'PSO675G9157' => 'pso', 'PSO832G1660' => 'pso', 'PSO832G1969' => 'pso', 'QL02p007186' => 'qlo', 'QL02p033904' => 'qlo', 'QL03p064391' => 'qlo', 'QL05p040593' => 'qlo', 'QL05p058242' => 'qlo', 'QL08p021825' => 'qlo', 'QL11p004981' => 'qlo', 'RcHm_v2.0_Chr1g0318301' => 'rch', 'RcHm_v2.0_Chr4g0418501' => 'rch', 'RcHm_v2.0_Chr4g0439971' => 'rch', 'RcHm_v2.0_Chr5g0008541' => 'rch', 'RcHm_v2.0_Chr5g0014101' => 'rch', 'RcHm_v2.0_Chr5g0014131' => 'rch', 'RcHm_v2.0_Chr5g0033621' => 'rch', 'RcHm_v2.0_Chr6g0272041' => 'rch', 'RcHm_v2.0_Chr6g0278831' => 'rch', 'Rhsim02G0130400' => 'rsi', 'Rhsim02G0171100' => 'rsi', 'Rhsim05G0053000' => 'rsi', 'Rhsim05G0053100' => 'rsi', 'Rhsim06G0096500' => 'rsi', 'Rhsim06G0096600' => 'rsi', 'Rhsim06G0199100' => 'rsi', 'Rhsim12G0062300' => 'rsi', 'Rhsim12G0062800' => 'rsi', 'Sabra02G0118600' => 'sbr', 'Sabra04G0027300' => 'sbr', 'Sabra04G0119500' => 'sbr', 'Sabra08G0112500' => 'sbr', 'Sabra11G0036800' => 'sbr', 'Sabra11G0103800' => 'sbr', 'Sabra13G0096300' => 'sbr', 'Sabra16G0262300' => 'sbr', 'Sabra18G0091700' => 'sbr', 'Sabra19G0095400' => 'sbr', 'SalBow6G3080' => 'sbo', 'SalBow7G1157' => 'sbo', 'SalBow7G2123' => 'sbo', 'SalBow7G2285' => 'sbo', 'SalBow7G3537' => 'sbo', 'SalBow8G2947' => 'sbo', 'SalBow8G4463' => 'sbo', 'SalBow8G5466' => 'sbo', 'Sc01g0001750' => 'sci', 'Sc02g0006640' => 'sci', 'Sc02g0006670' => 'sci', 'Sc04g0008220' => 'sci', 'Sc05g0006190' => 'sci', 'Sc08g0002760' => 'sci', 'Sc17g0006170' => 'sci', 'Sc22g0002050' => 'sci', 'Sc23g0001190' => 'sci', 'Sc24g0000980' => 'sci', 'Sed0006245' => 'sed', 'Sed0007543' => 'sed', 'Sed0009411' => 'sed', 'Sed0010765' => 'sed', 'Sed0012944' => 'sed', 'Sed0014682' => 'sed', 'Sed0016174' => 'sed', 'Sed0016796' => 'sed', 'Sed0020317' => 'sed', 'Sed0021467' => 'sed', 'SEGI_01316' => 'sgi', 'SEGI_03374' => 'sgi', 'SEGI_16265' => 'sgi', 'SEGI_18569' => 'sgi', 'SEGI_20351' => 'sgi', 'SEGI_26395' => 'sgi', 'SEGI_29469' => 'sgi', 'SEGI_34771' => 'sgi', 'SEGI_36769' => 'sgi', 'SEGI_37139' => 'sgi', 'SGA_v2.0_scaffold100G29687' => 'sas', 'SGA_v2.0_scaffold118G32472' => 'sas', 'SGA_v2.0_scaffold14G07051' => 'sas', 'SGA_v2.0_scaffold183G39845' => 'sas', 'SGA_v2.0_scaffold1G00174' => 'sas', 'SGA_v2.0_scaffold22G09714' => 'sas', 'SGA_v2.0_scaffold333G48992' => 'sas', 'SGA_v2.0_scaffold46G17491' => 'sas', 'SGA_v2.0_scaffold49G18294' => 'sas', 'SGA_v2.0_scaffold63G21658' => 'sas', 'SHI01741' => 'shi', 'SHI05771' => 'shi', 'SHI18077' => 'shi', 'SHI20525' => 'shi', 'SHI20527' => 'shi', 'SHI20528' => 'shi', 'SMO172G0185' => 'smo', 'SMO198G0020' => 'smo', 'SMO351G0006' => 'smo', 'SMO356G0118' => 'smo', 'SMO358G0296' => 'smo', 'SMO367G0079' => 'smo', 'SMO367G1277' => 'smo', 'Solyc01g014220.3' => 'sly', 'Solyc01g111770.2' => 'sly', 'Solyc02g078180.3' => 'sly', 'Solyc03g006430.3' => 'sly', 'Solyc03g006456.1' => 'sly', 'Solyc03g079860.2' => 'sly', 'Solyc04g079770.3' => 'sly', 'Solyc05g007430.4' => 'sly', 'Solyc07g063150.3' => 'sly', 'Solyc08g016620.3' => 'sly', 'Solyc09g057590.3' => 'sly', 'Solyc09g057600.1' => 'sly', 'Solyc10g009050.3' => 'sly', 'Solyc11g017420.2' => 'sly', 'Sopen01g053810' => 'spe', 'Sopen02g023040' => 'spe', 'Sopen03g002440' => 'spe', 'Sopen04g033350' => 'spe', 'Sopen05g003310' => 'spe', 'Sopen07g004050' => 'spe', 'Sopen07g031340' => 'spe', 'Sopen08g006990' => 'spe', 'Sopen10g004830' => 'spe', 'Sopen11g009370' => 'spe', 'Sp1g24450' => 'spa', 'Sp1g29670' => 'spa', 'Sp1g39600' => 'spa', 'Sp2g11080' => 'spa', 'Sp2g13970' => 'spa', 'Sp4g16130' => 'spa', 'Sp6g13080' => 'spa', 'Sp7g37270' => 'spa', 'TAR371G0065' => 'tar', 'TAR376G0340' => 'tar', 'TAR376G0435' => 'tar', 'TAR381G0002' => 'tar', 'TAR381G1236' => 'tar', 'TAR624G0055' => 'tar', 'TAR624G0324' => 'tar', 'TAR624G0696' => 'tar', 'TAR624G0906' => 'tar', 'TAR625G0107' => 'tar', 'TAR626G0015' => 'tar', 'TAR626G1356' => 'tar', 'TAR627G0888' => 'tar', 'TAR628G0399' => 'tar', 'TAR628G1327' => 'tar', 'TAR629G2831' => 'tar', 'TAR629G2874' => 'tar', 'TAR633G1432' => 'tar', 'TAR633G2771' => 'tar', 'THA.LOC104803394' => 'tha', 'THA.LOC104805153' => 'tha', 'THA.LOC104806784' => 'tha', 'THA.LOC104810473' => 'tha', 'THA.LOC104813100' => 'tha', 'THA.LOC104814215' => 'tha', 'THA.LOC104815554' => 'tha', 'THA.LOC104820544' => 'tha', 'THA.LOC104824754' => 'tha', 'THA.LOC104827717' => 'tha', 'Thecc.02G031400' => 'tca', 'Thecc.02G055900' => 'tca', 'Thecc.02G350800' => 'tca', 'Thecc.06G150900' => 'tca', 'Thecc.06G186600' => 'tca', 'Thecc.07G089600' => 'tca', 'Thecc.08G020400' => 'tca', 'Thecc.08G182100' => 'tca', 'Thhalv10000873m.g' => 'esa', 'Thhalv10004185m.g' => 'esa', 'Thhalv10006981m.g' => 'esa', 'Thhalv10007204m.g' => 'esa', 'Thhalv10011374m.g' => 'esa', 'Thhalv10013482m.g' => 'esa', 'Thhalv10017801m.g' => 'esa', 'Thhalv10024983m.g' => 'esa', 'TPR.G12072' => 'tpr', 'TPR.G15769' => 'tpr', 'TPR.G16504' => 'tpr', 'TPR.G16506' => 'tpr', 'TPR.G24345' => 'tpr', 'TPR.G26666' => 'tpr', 'TPR.G27320' => 'tpr', 'TPR.G31819' => 'tpr', 'TPR.G38879' => 'tpr', 'TPR.G39015' => 'tpr', 'TPR.G8819' => 'tpr', 'TWI09G0924' => 'twi', 'TWI12G0811' => 'twi', 'TWI12G1294' => 'twi', 'TWI31G0150' => 'twi', 'TWI36G1262' => 'twi', 'TWI38G1287' => 'twi', 'TWI38G1633' => 'twi', 'TWI38G1982' => 'twi', 'TWI39G0116' => 'twi', 'TWI60G1011' => 'twi', 'TWI63G0171' => 'twi', 'TWI73G0839' => 'twi', 'TWI79G1511' => 'twi', 'unitig_0.g915' => 'ugi', 'unitig_0.g916' => 'ugi', 'unitig_21.g20219' => 'ugi', 'unitig_21.g20416' => 'ugi', 'unitig_578.g16132' => 'ugi', 'unitig_578.g16718' => 'ugi', 'unitig_62.g23481' => 'ugi', 'unitig_744.g24535' => 'ugi', 'unitig_749.g13525' => 'ugi', 'vmacro01248' => 'vma', 'vmacro02290' => 'vma', 'vmacro10946' => 'vma', 'vmacro11865' => 'vma', 'vmacro12493' => 'vma', 'vmacro17322' => 'vma', 'vmacro21599' => 'vma', 'vmacro23041' => 'vma', 'VMungo0251G0004' => 'vmu', 'VMungo0251G2639' => 'vmu', 'VMungo0251G2967' => 'vmu', 'VMungo0540G0864' => 'vmu', 'VMungo0540G1569' => 'vmu', 'VMungo0647G0317' => 'vmu', 'VMungo0720G1373' => 'vmu', 'VMungo0720G1508' => 'vmu', 'VMungo1080G0485' => 'vmu', 'VMungo1215G3177' => 'vmu', 'Zm00001eb112600' => 'zma', 'Zm00001eb120220' => 'zma', 'Zm00001eb153240' => 'zma', 'Zm00001eb168880' => 'zma', 'Zm00001eb213920' => 'zma', 'Zm00001eb228280' => 'zma', 'Zm00001eb254580' => 'zma', 'Zm00001eb272180' => 'zma', 'Zm00001eb293190' => 'zma', 'Zm00001eb322930' => 'zma', 'Zm00001eb353360' => 'zma', 'Zm00001eb353390' => 'zma', 'Zm00001eb353430' => 'zma', 'Zm00001eb353440' => 'zma', 'Zm00001eb353780' => 'zma' ) $gf_id = 'HOM05D000499' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000499' ) $data_identifier = 'HOM05D000499' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 29, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 12, 'amhyb' => (int) 8, 'aly' => (int) 12, 'aox' => (int) 9, 'arhy' => (int) 26, 'ath' => (int) 8, 'atr' => (int) 7, 'acertr' => (int) 10, 'cqu' => (int) 15, 'bca' => (int) 29, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 11, 'cansat' => (int) 8, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 9, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 8, 'cpa' => (int) 10, 'csa' => (int) 7, 'camsi' => (int) 20, 'dca' => (int) 8, 'din' => (int) 12, 'dzi' => (int) 14, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 6, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 38, 'gra' => (int) 16, 'vvi' => (int) 8, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 5, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 11, 'lja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 11, 'mpo' => (int) 3, 'mbi' => (int) 14, 'mdo' => (int) 14, 'mtr' => (int) 8, 'cme' => (int) 9, 'egut' => (int) 9, 'ama' => (int) 11, 'nta' => (int) 17, 'nnu' => (int) 11, 'oeu' => (int) 18, 'osa' => (int) 8, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 6, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 9, 'rsi' => (int) 9, 'sbr' => (int) 10, 'sbo' => (int) 8, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 10, 'sas' => (int) 10, 'shi' => (int) 6, 'smo' => (int) 7, 'sly' => (int) 14, 'spe' => (int) 10, 'spa' => (int) 8, 'tar' => (int) 19, 'tha' => (int) 10, 'tca' => (int) 8, 'esa' => (int) 8, 'tpr' => (int) 11, 'twi' => (int) 13, 'ugi' => (int) 9, 'vma' => (int) 8, 'vmu' => (int) 10, 'zma' => (int) 15 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb353780' $species_info = array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ) $local_species = 'aag' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000499', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1066', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p29780' => 'bna', 'A02p33180' => 'bna', 'A03p16470' => 'bna', 'A03p66010' => 'bna', 'A04p25970' => 'bna', 'A06p01270' => 'bna', 'A06p46080' => 'bna', 'A07p11400' => 'bna', 'A08p01840' => 'bna', 'A08p08230' => 'bna', 'A08p25740' => 'bna', 'A09p32070' => 'bna', 'A09p37830' => 'bna', 'A09p42840' => 'bna', 'A09p42850' => 'bna', 'Aa31LG10G2060' => 'aar', 'Aa31LG2G7410' => 'aar', 'Aa31LG6G10200' => 'aar', 'Aa31LG6G16680' => 'aar', 'Aa31LG6G8470' => 'aar', 'Aa31LG9G12730' => 'aar', 'Aa31LG9G13680' => 'aar', 'Aa31LG9G14920' => 'aar', 'Aa31LG9G6650' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4977' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5467' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3254' => 'aag', 'Actinidia02578' => 'ach', 'Actinidia07693' => 'ach', 'Actinidia08413' => 'ach', 'Actinidia08414' => 'ach', 'Actinidia15289' => 'ach', 'Actinidia19871' => 'ach', 'Actinidia21475' => 'ach', 'Actinidia22576' => 'ach', 'Actinidia28327' => 'ach', 'Actinidia32491' => 'ach', 'Actinidia39463' => 'ach', 'Actinidia39571' => 'ach', 'Ah.01g013750' => 'amhyb', 'Ah.01g023210' => 'amhyb', 'Ah.04g164850' => 'amhyb', 'Ah.05g178060' => 'amhyb', 'Ah.07g204270' => 'amhyb', 'Ah.07g208480' => 'amhyb', 'Ah.09g237410' => 'amhyb', 'Ah.14g089460' => 'amhyb', 'AL1G41790' => 'aly', 'AL1G49050' => 'aly', 'AL1G53810' => 'aly', 'AL1G61400' => 'aly', 'AL4G18580' => 'aly', 'AL5G12510' => 'aly', 'AL5G12540' => 'aly', 'AL6G43230' => 'aly', 'AL7G10370' => 'aly', 'AL7G19250' => 'aly', 'AL8G12240' => 'aly', 'AL8G18540' => 'aly', 'Aqoxy1G02409' => 'aox', 'Aqoxy2G03993' => 'aox', 'Aqoxy3G03357' => 'aox', 'Aqoxy4G00785' => 'aox', 'Aqoxy5G02598' => 'aox', 'Aqoxy6G00132' => 'aox', 'Aqoxy7G01776' => 'aox', 'Aqoxy7G02316' => 'aox', 'Aqoxy7G03973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.12AFKW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B8730' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27IQR1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3F75VG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3RE0GA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41TCQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.527VTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FIR39' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5W8UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DA38EV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ63HS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H1I32C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HC27T5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4M8AP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7N3CZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9UVDZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LS1NQA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT1D4B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SKC4TM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCFV76' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF9Q1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQWD9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1ZM88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WE07RT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YCK7VH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJE6Q6' => 'arhy', 'AT1G28240' => 'ath', 'AT1G34550' => 'ath', 'AT1G53040' => 'ath', 'AT2G02910' => 'ath', 'AT4G09630' => 'ath', 'AT4G38500' => 'ath', 'AT5G42660' => 'ath', 'AT5G46220' => 'ath', 'ATR0152G026' => 'atr', 'ATR0564G343' => 'atr', 'ATR0706G151' => 'atr', 'ATR0733G207' => 'atr', 'ATR0751G234' => 'atr', 'ATR0807G048' => 'atr', 'ATR1091G084' => 'atr', 'Atru.chr10.1229' => 'acertr', 'Atru.chr10.1230' => 'acertr', 'Atru.chr10.1874' => 'acertr', 'Atru.chr11.1808' => 'acertr', 'Atru.chr13.1795' => 'acertr', 'Atru.chr13.570' => 'acertr', 'Atru.chr2.2608' => 'acertr', 'Atru.chr2.2609' => 'acertr', 'Atru.chr5.3428' => 'acertr', 'Atru.chr8.1171' => 'acertr', 'AUR62004651' => 'cqu', 'AUR62008675' => 'cqu', 'AUR62010014' => 'cqu', 'AUR62013004' => 'cqu', 'AUR62014825' => 'cqu', 'AUR62015015' => 'cqu', 'AUR62015151' => 'cqu', 'AUR62017020' => 'cqu', 'AUR62019422' => 'cqu', 'AUR62023570' => 'cqu', 'AUR62025571' => 'cqu', 'AUR62029098' => 'cqu', 'AUR62033863' => 'cqu', 'AUR62034296' => 'cqu', 'AUR62040075' => 'cqu', 'BcaB02g07334' => 'bca', 'BcaB02g10575' => 'bca', 'BcaB03g12119' => 'bca', 'BcaB03g12120' => 'bca', 'BcaB03g13945' => 'bca', 'BcaB04g17123' => 'bca', 'BcaB04g17867' => 'bca', 'BcaB04g19839' => 'bca', 'BcaB07g30317' => 'bca', 'BcaB07g32432' => 'bca', 'BcaB07g33362' => 'bca', 'BcaB08g36611' => 'bca', 'BcaC01g00028' => 'bca', 'BcaC01g01356' => 'bca', 'BcaC01g02034' => 'bca', 'BcaC01g06051' => 'bca', 'BcaC03g16839' => 'bca', 'BcaC03g17176' => 'bca', 'BcaC05g26829' => 'bca', 'BcaC06g31490' => 'bca', 'BcaC06g35344' => 'bca', 'BcaC06g36570' => 'bca', 'BcaC07g37537' => 'bca', 'BcaC08g43491' => 'bca', 'BcaC08g43773' => 'bca', 'BcaNung00234' => 'bca', 'BcaNung01982' => 'bca', 'BcaNung03707' => 'bca', 'BcaNung06454' => 'bca', 'BolC2t10762H' => 'bol', 'BolC2t11191H' => 'bol', 'BolC3t14322H' => 'bol', 'BolC3t19747H' => 'bol', 'BolC3t21425H' => 'bol', 'BolC4t27800H' => 'bol', 'BolC5t31423H' => 'bol', 'BolC6t35951H' => 'bol', 'BolC6t36282H' => 'bol', 'BolC7t40678H' => 'bol', 'BolC7t40679H' => 'bol', 'BolC7t42222H' => 'bol', 'BolC7t43492H' => 'bol', 'BolC7t46785H' => 'bol', 'BolC8t47853H' => 'bol', 'BolC9t56805H' => 'bol', 'BraA02t08000Z' => 'bra', 'BraA02t08341Z' => 'bra', 'BraA03t10936Z' => 'bra', 'BraA03t15657Z' => 'bra', 'BraA04t18100Z' => 'bra', 'BraA05t20523Z' => 'bra', 'BraA06t23353Z' => 'bra', 'BraA06t27473Z' => 'bra', 'BraA06t27769Z' => 'bra', 'BraA07t28928Z' => 'bra', 'BraA08t32236Z' => 'bra', 'BraA08t32841Z' => 'bra', 'BraA08t34524Z' => 'bra', 'BraA09t38742Z' => 'bra', 'BraA09t39295Z' => 'bra', 'C02p47180' => 'bna', 'C02p50990' => 'bna', 'C03p19360' => 'bna', 'C03p74950' => 'bna', 'C03p91000' => 'bna', 'C04p63260' => 'bna', 'C05p27050' => 'bna', 'C06p08750' => 'bna', 'C06p11490' => 'bna', 'C07p02820' => 'bna', 'C07p17180' => 'bna', 'C07p29440' => 'bna', 'C07p63730' => 'bna', 'C09p39260' => 'bna', 'CAN.G1164.34' => 'can', 'CAN.G1164.39' => 'can', 'CAN.G1530.3' => 'can', 'CAN.G162.61' => 'can', 'CAN.G176.6' => 'can', 'CAN.G289.49' => 'can', 'CAN.G370.21' => 'can', 'CAN.G370.22' => 'can', 'CAN.G371.117' => 'can', 'CAN.G58.37' => 'can', 'CAN.G588.98' => 'can', 'CANSAT21G2266' => 'cansat', 'CANSAT25G2799' => 'cansat', 'CANSAT35G0862' => 'cansat', 'CANSAT35G1704' => 'cansat', 'CANSAT35G1760' => 'cansat', 'CANSAT56G3971' => 'cansat', 'CANSAT56G4116' => 'cansat', 'CANSAT80G1259' => 'cansat', 'CARHR027730' => 'chi', 'CARHR033880' => 'chi', 'CARHR043270' => 'chi', 'CARHR145330' => 'chi', 'CARHR145340' => 'chi', 'CARHR175570' => 'chi', 'CARHR181570' => 'chi', 'CARHR258470' => 'chi', 'CARHR260490' => 'chi', 'CARHR294220' => 'chi', 'Carub.0001s2668' => 'cru', 'Carub.0001s3257' => 'cru', 'Carub.0001s4220' => 'cru', 'Carub.0005s0179' => 'cru', 'Carub.0006s2807' => 'cru', 'Carub.0007s0039' => 'cru', 'Carub.0008s0169' => 'cru', 'Carub.0008s0636' => 'cru', 'Ca_00338_v3' => 'car', 'Ca_00542_v3' => 'car', 'Ca_01844_v3' => 'car', 'Ca_10611_v3' => 'car', 'Ca_13326_v3' => 'car', 'Ca_17944_v3' => 'car', 'Ca_18546_v3' => 'car', 'Ca_24219_v3' => 'car', 'Ca_29972_v3' => 'car', 'CBR_g3681' => 'cbr', 'CBR_g40021' => 'cbr', 'Cc01_g08140' => 'ccan', 'Cc02_g13410' => 'ccan', 'Cc02_g37480' => 'ccan', 'Cc05_g12030' => 'ccan', 'Cc09_g03370' => 'ccan', 'Cc09_g10300' => 'ccan', 'Cc10_g03530' => 'ccan', 'Cc10_g11380' => 'ccan', 'CDE01G0176' => 'cde', 'CDE02G0675' => 'cde', 'CDE02G0942' => 'cde', 'CDE02G1153' => 'cde', 'CDE02G4177' => 'cde', 'CDE04G2117' => 'cde', 'CDE04G2736' => 'cde', 'CDE08G1161' => 'cde', 'CDE09G1238' => 'cde', 'Cfa000467' => 'cfa', 'Cfa000947' => 'cfa', 'Cfa004969' => 'cfa', 'Cfa005284' => 'cfa', 'Cfa008993' => 'cfa', 'Cfa018187' => 'cfa', 'Cfa018454' => 'cfa', 'Cfa020585' => 'cfa', 'Ciclev10000424m.g' => 'ccl', 'Ciclev10003605m.g' => 'ccl', 'Ciclev10007828m.g' => 'ccl', 'Ciclev10014620m.g' => 'ccl', 'Ciclev10015169m.g' => 'ccl', 'Ciclev10018291m.g' => 'ccl', 'Ciclev10028256m.g' => 'ccl', 'Ciclev10033822m.g' => 'ccl', 'CiPaw.05G060300' => 'cil', 'CiPaw.05G085000' => 'cil', 'CiPaw.06G083700' => 'cil', 'CiPaw.06G120300' => 'cil', 'CiPaw.09G060500' => 'cil', 'CiPaw.09G123800' => 'cil', 'CiPaw.11G169700' => 'cil', 'CiPaw.12G118300' => 'cil', 'CiPaw.15G071000' => 'cil', 'CiPaw.15G081900' => 'cil', 'ClCG01G024610' => 'cla', 'ClCG03G006070' => 'cla', 'ClCG05G019250' => 'cla', 'ClCG09G009500' => 'cla', 'ClCG11G008200' => 'cla', 'ClCG11G018080' => 'cla', 'COL.COLO4_17373' => 'col', 'COL.COLO4_22994' => 'col', 'COL.COLO4_26389' => 'col', 'COL.COLO4_27170' => 'col', 'COL.COLO4_31074' => 'col', 'COL.COLO4_31465' => 'col', 'COL.COLO4_36438' => 'col', 'COL.COLO4_36439' => 'col', 'Cpa.g.c38781' => 'cpa', 'Cpa.g.sc128.12' => 'cpa', 'Cpa.g.sc166.7' => 'cpa', 'Cpa.g.sc166.8' => 'cpa', 'Cpa.g.sc20.111' => 'cpa', 'Cpa.g.sc27.31' => 'cpa', 'Cpa.g.sc64.36' => 'cpa', 'Cpa.g.sc64.37' => 'cpa', 'Cpa.g.sc66.49' => 'cpa', 'Cpa.g.sc80.64' => 'cpa', 'CsaV3_1G012320' => 'csa', 'CsaV3_2G008480' => 'csa', 'CsaV3_2G033450' => 'csa', 'CsaV3_3G044830' => 'csa', 'CsaV3_4G033710' => 'csa', 'CsaV3_6G051730' => 'csa', 'CsaV3_7G025350' => 'csa', 'CSS0001067' => 'camsi', 'CSS0005996' => 'camsi', 'CSS0006590' => 'camsi', 'CSS0009673' => 'camsi', 'CSS0010201' => 'camsi', 'CSS0010549' => 'camsi', 'CSS0011364' => 'camsi', 'CSS0014473' => 'camsi', 'CSS0014961' => 'camsi', 'CSS0020191' => 'camsi', 'CSS0021165' => 'camsi', 'CSS0022306' => 'camsi', 'CSS0030591' => 'camsi', 'CSS0030696' => 'camsi', 'CSS0032653' => 'camsi', 'CSS0037487' => 'camsi', 'CSS0041102' => 'camsi', 'CSS0041261' => 'camsi', 'CSS0046246' => 'camsi', 'CSS0049256' => 'camsi', 'DCAR_004075' => 'dca', 'DCAR_011538' => 'dca', 'DCAR_019553' => 'dca', 'DCAR_020952' => 'dca', 'DCAR_021739' => 'dca', 'DCAR_027407' => 'dca', 'DCAR_027913' => 'dca', 'DCAR_028066' => 'dca', 'Dinv05899' => 'din', 'Dinv07563' => 'din', 'Dinv08010' => 'din', 'Dinv14125' => 'din', 'Dinv20172' => 'din', 'Dinv30743' => 'din', 'Dinv31229' => 'din', 'Dinv34162' => 'din', 'Dinv36028' => 'din', 'Dinv39368' => 'din', 'Dinv40565' => 'din', 'Dinv41706' => 'din', 'Duzib052G0089' => 'dzi', 'Duzib116G0641' => 'dzi', 'Duzib132G0069' => 'dzi', 'Duzib132G1219' => 'dzi', 'Duzib147G0278' => 'dzi', 'Duzib160G0480' => 'dzi', 'Duzib170G0661' => 'dzi', 'Duzib177G0591' => 'dzi', 'Duzib187G1353' => 'dzi', 'Duzib192G0858' => 'dzi', 'Duzib192G0883' => 'dzi', 'Duzib213G0506' => 'dzi', 'Duzib235G0289' => 'dzi', 'Duzib251G0422' => 'dzi', 'ECA232G3898' => 'eca', 'ECA233G5950' => 'eca', 'ECA234G1699' => 'eca', 'ECA234G2421' => 'eca', 'ECA236G0426' => 'eca', 'ECA236G4331' => 'eca', 'ECA248G2573' => 'eca', 'EL10Ac1g00077' => 'bvu', 'EL10Ac1g01746' => 'bvu', 'EL10Ac2g03464' => 'bvu', 'EL10Ac4g08176' => 'bvu', 'EL10Ac7g17521' => 'bvu', 'EL10Ac8g20386' => 'bvu', 'EL10Ac9g21343' => 'bvu', 'EL10Ac9g22688' => 'bvu', 'Eucgr.B03434' => 'egr', 'Eucgr.D00618' => 'egr', 'Eucgr.E02395' => 'egr', 'Eucgr.F01129' => 'egr', 'Eucgr.F02622' => 'egr', 'Eucgr.F04207' => 'egr', 'FAN01G0570' => 'fan', 'FAN03G3351' => 'fan', 'FAN06G3702' => 'fan', 'FAN07G2149' => 'fan', 'FAN10G3758' => 'fan', 'FAN11G1170' => 'fan', 'FAN11G2050' => 'fan', 'FAN11G2724' => 'fan', 'FAN12G1700' => 'fan', 'FAN12G2028' => 'fan', 'FAN15G1160' => 'fan', 'FAN15G3063' => 'fan', 'FAN16G2540' => 'fan', 'FAN16G3077' => 'fan', 'FAN16G3624' => 'fan', 'FAN17G0221' => 'fan', 'FAN20G2492' => 'fan', 'FAN20G2905' => 'fan', 'FAN21G0548' => 'fan', 'FAN21G1300' => 'fan', 'FAN22G0077' => 'fan', 'FAN22G1315' => 'fan', 'FAN24G1280' => 'fan', 'FAN24G1445' => 'fan', 'FAN24G3527' => 'fan', 'FAN25G0464' => 'fan', 'FAN25G2885' => 'fan', 'FAN25G3270' => 'fan', 'FAN27G1101' => 'fan', 'FAN27G2846' => 'fan', 'FAN27G3524' => 'fan', 'FvH4_2g11770' => 'fve', 'FvH4_2g15630' => 'fve', 'FvH4_3g05570' => 'fve', 'FvH4_3g09110' => 'fve', 'FvH4_3g19940' => 'fve', 'FvH4_4g04821' => 'fve', 'FvH4_4g31480' => 'fve', 'FvH4_7g01740' => 'fve', 'Glyma.05G130400' => 'gma', 'Glyma.05G156400' => 'gma', 'Glyma.07G197000' => 'gma', 'Glyma.08G085151' => 'gma', 'Glyma.08G114500' => 'gma', 'Glyma.08G300400' => 'gma', 'Glyma.10G215800' => 'gma', 'Glyma.12G224400' => 'gma', 'Glyma.13G179300' => 'gma', 'Glyma.13G218151' => 'gma', 'Glyma.13G238800' => 'gma', 'Glyma.13G276900' => 'gma', 'Glyma.14G078200' => 'gma', 'Glyma.15G074500' => 'gma', 'Glyma.15G094100' => 'gma', 'Glyma.17G247200' => 'gma', 'Glyma.18G120100' => 'gma', 'Glyma.20G176000' => 'gma', 'Gohir.A01G063600' => 'ghi', 'Gohir.A01G170301' => 'ghi', 'Gohir.A02G060500' => 'ghi', 'Gohir.A05G133850' => 'ghi', 'Gohir.A05G161400' => 'ghi', 'Gohir.A06G012900' => 'ghi', 'Gohir.A06G035901' => 'ghi', 'Gohir.A06G127100' => 'ghi', 'Gohir.A06G210500' => 'ghi', 'Gohir.A08G008650' => 'ghi', 'Gohir.A09G072700' => 'ghi', 'Gohir.A09G088301' => 'ghi', 'Gohir.A10G040600' => 'ghi', 'Gohir.A12G036300' => 'ghi', 'Gohir.A12G143350' => 'ghi', 'Gohir.A12G165500' => 'ghi', 'Gohir.A13G145700' => 'ghi', 'Gohir.D01G050000' => 'ghi', 'Gohir.D01G051366' => 'ghi', 'Gohir.D01G161350' => 'ghi', 'Gohir.D02G065900' => 'ghi', 'Gohir.D05G164200' => 'ghi', 'Gohir.D05G355500' => 'ghi', 'Gohir.D06G010400' => 'ghi', 'Gohir.D06G111250' => 'ghi', 'Gohir.D06G132000' => 'ghi', 'Gohir.D06G210500' => 'ghi', 'Gohir.D07G165675' => 'ghi', 'Gohir.D08G062240' => 'ghi', 'Gohir.D08G086101' => 'ghi', 'Gohir.D08G138060' => 'ghi', 'Gohir.D09G072300' => 'ghi', 'Gohir.D10G041400' => 'ghi', 'Gohir.D11G191020' => 'ghi', 'Gohir.D11G212066' => 'ghi', 'Gohir.D12G036300' => 'ghi', 'Gohir.D12G168600' => 'ghi', 'Gohir.D13G150600' => 'ghi', 'Gorai.001G057300' => 'gra', 'Gorai.002G069900' => 'gra', 'Gorai.002G200000' => 'gra', 'Gorai.003G067600' => 'gra', 'Gorai.005G074800' => 'gra', 'Gorai.006G087300' => 'gra', 'Gorai.008G037500' => 'gra', 'Gorai.008G181400' => 'gra', 'Gorai.009G169400' => 'gra', 'Gorai.009G387900' => 'gra', 'Gorai.010G013300' => 'gra', 'Gorai.010G153800' => 'gra', 'Gorai.010G255800' => 'gra', 'Gorai.011G043700' => 'gra', 'Gorai.011G198900' => 'gra', 'Gorai.013G168400' => 'gra', 'GSVIVG01005212001' => 'vvi', 'GSVIVG01006163001' => 'vvi', 'GSVIVG01009625001' => 'vvi', 'GSVIVG01014338001' => 'vvi', 'GSVIVG01020005001' => 'vvi', 'GSVIVG01021450001' => 'vvi', 'GSVIVG01023975001' => 'vvi', 'GSVIVG01034490001' => 'vvi', 'HanXRQChr04g0112071' => 'han', 'HanXRQChr05g0131151' => 'han', 'HanXRQChr09g0262371' => 'han', 'HanXRQChr09g0268401' => 'han', 'HanXRQChr10g0279241' => 'han', 'HanXRQChr10g0297961' => 'han', 'HanXRQChr11g0326231' => 'han', 'HanXRQChr11g0328471' => 'han', 'HanXRQChr16g0507941' => 'han', 'HanXRQChr17g0560211' => 'han', 'Haze_02108' => 'cav', 'Haze_02428' => 'cav', 'Haze_05593' => 'cav', 'Haze_06448' => 'cav', 'Haze_09427' => 'cav', 'Haze_12022' => 'cav', 'Haze_17612' => 'cav', 'Haze_17928' => 'cav', 'Hma1.2p1_0032F.1_g019250' => 'hma', 'Hma1.2p1_0163F.1_g072690' => 'hma', 'Hma1.2p1_0265F.1_g106710' => 'hma', 'Hma1.2p1_0286F.1_g113970' => 'hma', 'Hma1.2p1_0363F.1_g136640' => 'hma', 'Hma1.2p1_0584F.1_g183470' => 'hma', 'Hma1.2p1_0885F.1_g232570' => 'hma', 'HPP92_006022' => 'vpl', 'HPP92_007320' => 'vpl', 'HPP92_011521' => 'vpl', 'HPP92_019387' => 'vpl', 'HPP92_024038' => 'vpl', 'Hund05891' => 'sun', 'Hund06450' => 'sun', 'Hund12053' => 'sun', 'Hund16800' => 'sun', 'Hund21222' => 'sun', 'Hund22896' => 'sun', 'Hund23746' => 'sun', 'Hund27083' => 'sun', 'Lalb_Chr02g0141831' => 'lal', 'Lalb_Chr02g0141841' => 'lal', 'Lalb_Chr05g0220411' => 'lal', 'Lalb_Chr06g0162081' => 'lal', 'Lalb_Chr09g0327651' => 'lal', 'Lalb_Chr13g0295051' => 'lal', 'Lalb_Chr15g0086801' => 'lal', 'Lalb_Chr16g0383781' => 'lal', 'Lalb_Chr16g0383791' => 'lal', 'Lalb_Chr18g0055441' => 'lal', 'Lalb_Chr18g0059611' => 'lal', 'Lalb_Chr20g0109661' => 'lal', 'Lalb_Chr20g0109831' => 'lal', 'Lalb_Chr20g0121871' => 'lal', 'Lalb_Chr22g0355361' => 'lal', 'Lalb_Chr25g0286371' => 'lal', 'Lj1A1187G43' => 'lonja', 'Lj1A1205T50' => 'lonja', 'Lj1A800G33' => 'lonja', 'Lj1C1187T7' => 'lonja', 'Lj1C843T11' => 'lonja', 'Lj1g0010940' => 'lja', 'Lj2A288T69' => 'lonja', 'Lj3g0024276' => 'lja', 'Lj4A47T76' => 'lonja', 'Lj4g0005805' => 'lja', 'Lj4g0006097' => 'lja', 'Lj4g0008528' => 'lja', 'Lj4g0024907' => 'lja', 'Lj5g0012472' => 'lja', 'Lj5g0018648' => 'lja', 'Lj6C789G1' => 'lonja', 'Lj6g0004000' => 'lja', 'Lj7A292G67' => 'lonja', 'Lj7A292T64' => 'lonja', 'Lj9A400T58' => 'lonja', 'Lsat_1_v5_gn_1_126181' => 'lsa', 'Lsat_1_v5_gn_4_123041' => 'lsa', 'Lsat_1_v5_gn_4_133620' => 'lsa', 'Lsat_1_v5_gn_4_53221' => 'lsa', 'Lsat_1_v5_gn_4_71961' => 'lsa', 'Lsat_1_v5_gn_7_105241' => 'lsa', 'Lsat_1_v5_gn_7_21361' => 'lsa', 'Lsat_1_v5_gn_7_28860' => 'lsa', 'Lsat_1_v5_gn_7_31260' => 'lsa', 'Lsat_1_v5_gn_8_52801' => 'lsa', 'Manes.02G191400' => 'mes', 'Manes.03G110100' => 'mes', 'Manes.04G071100' => 'mes', 'Manes.05G100500' => 'mes', 'Manes.05G164700' => 'mes', 'Manes.15G087000' => 'mes', 'Manes.15G121500' => 'mes', 'Manes.16G028300' => 'mes', 'Manes.17G046100' => 'mes', 'Manes.17G069800' => 'mes', 'Manes.18G100500' => 'mes', 'Mapoly0002s0109' => 'mpo', 'Mapoly0024s0007' => 'mpo', 'Mapoly0089s0032' => 'mpo', 'MBI04_g42241_MAGBIO' => 'mbi', 'MBI05_g11988_MAGBIO' => 'mbi', 'MBI05_g35452_MAGBIO' => 'mbi', 'MBI07_g30179_MAGBIO' => 'mbi', 'MBI07_g35859_MAGBIO' => 'mbi', 'MBI07_g35860_MAGBIO' => 'mbi', 'MBI07_g37166_MAGBIO' => 'mbi', 'MBI08_g18172_MAGBIO' => 'mbi', 'MBI09_g08441_MAGBIO' => 'mbi', 'MBI13_g01676_MAGBIO' => 'mbi', 'MBI14_g42955_MAGBIO' => 'mbi', 'MBI16_g13161_MAGBIO' => 'mbi', 'MBI17_g27204_MAGBIO' => 'mbi', 'MBI19_g21595_MAGBIO' => 'mbi', 'MD00G1148400' => 'mdo', 'MD02G1301200' => 'mdo', 'MD03G1227800' => 'mdo', 'MD05G1041100' => 'mdo', 'MD05G1124800' => 'mdo', 'MD05G1284000' => 'mdo', 'MD05G1338800' => 'mdo', 'MD05G1338900' => 'mdo', 'MD07G1022800' => 'mdo', 'MD10G1047500' => 'mdo', 'MD10G1127500' => 'mdo', 'MD10G1262300' => 'mdo', 'MD10G1293800' => 'mdo', 'MD16G1074300' => 'mdo', 'Medtr1g021670' => 'mtr', 'Medtr1g096320' => 'mtr', 'Medtr2g013690' => 'mtr', 'Medtr2g019450' => 'mtr', 'Medtr2g085170' => 'mtr', 'Medtr4g088785' => 'mtr', 'Medtr8g055930' => 'mtr', 'Medtr8g085850' => 'mtr', 'MELO3C002605.2' => 'cme', 'MELO3C003891.2' => 'cme', 'MELO3C004012.2' => 'cme', 'MELO3C007134.2' => 'cme', 'MELO3C008118.2' => 'cme', 'MELO3C016700.2' => 'cme', 'MELO3C024127.2' => 'cme', 'MELO3C033361.2' => 'cme', 'MELO3C033362.2' => 'cme', 'Migut.C00430' => 'egut', 'Migut.C01246' => 'egut', 'Migut.E00101' => 'egut', 'Migut.H01486' => 'egut', 'Migut.H01939' => 'egut', 'Migut.K00360' => 'egut', 'Migut.M00910' => 'egut', 'Migut.M01139' => 'egut', 'Migut.N02677' => 'egut', 'MSTRG.13252' => 'ama', 'MSTRG.14701' => 'ama', 'MSTRG.1521' => 'ama', 'MSTRG.15884' => 'ama', 'MSTRG.16242' => 'ama', 'MSTRG.22285' => 'ama', 'MSTRG.22444' => 'ama', 'MSTRG.2349' => 'ama', 'MSTRG.26308' => 'ama', 'MSTRG.28296' => 'ama', 'MSTRG.9895' => 'ama', 'Nitab4.5_0000110g0060' => 'nta', 'Nitab4.5_0000420g0130' => 'nta', 'Nitab4.5_0000422g0030' => 'nta', 'Nitab4.5_0000560g0180' => 'nta', 'Nitab4.5_0000703g0100' => 'nta', 'Nitab4.5_0000786g0200' => 'nta', 'Nitab4.5_0001336g0020' => 'nta', 'Nitab4.5_0001796g0030' => 'nta', 'Nitab4.5_0003348g0060' => 'nta', 'Nitab4.5_0003698g0040' => 'nta', 'Nitab4.5_0003942g0090' => 'nta', 'Nitab4.5_0004775g0070' => 'nta', 'Nitab4.5_0004864g0030' => 'nta', 'Nitab4.5_0005615g0020' => 'nta', 'Nitab4.5_0009288g0030' => 'nta', 'Nitab4.5_0009341g0010' => 'nta', 'Nitab4.5_0009535g0010' => 'nta', 'Nn1g03995' => 'nnu', 'Nn1g04100' => 'nnu', 'Nn1g06530' => 'nnu', 'Nn3g16404' => 'nnu', 'Nn3g17212' => 'nnu', 'Nn3g20776' => 'nnu', 'Nn3g21923' => 'nnu', 'Nn5g27737' => 'nnu', 'Nn5g29461' => 'nnu', 'Nn7g38355' => 'nnu', 'Nn8g39873' => 'nnu', 'Oeu000548.2' => 'oeu', 'Oeu004672.1' => 'oeu', 'Oeu015605.2' => 'oeu', 'Oeu016092.1' => 'oeu', 'Oeu017879.3' => 'oeu', 'Oeu024910.1' => 'oeu', 'Oeu028965.1' => 'oeu', 'Oeu031269.1' => 'oeu', 'Oeu031270.1' => 'oeu', 'Oeu032535.1' => 'oeu', 'Oeu034151.1' => 'oeu', 'Oeu034152.1' => 'oeu', 'Oeu034588.2' => 'oeu', 'Oeu050846.1' => 'oeu', 'Oeu050849.2' => 'oeu', 'Oeu051063.2' => 'oeu', 'Oeu052368.1' => 'oeu', 'Oeu052370.1' => 'oeu', 'Os01g0210400' => 'osa', 'Os01g0304300' => 'osa', 'Os01g0749100' => 'osa', 'Os02g0745800' => 'osa', 'Os03g0769050' => 'osa', 'Os05g0531500' => 'osa', 'Os06g0724300' => 'osa', 'Os11g0198100' => 'osa', 'Peaxi162Scf00069g01425' => 'pax', 'Peaxi162Scf00280g00811' => 'pax', 'Peaxi162Scf00310g00615' => 'pax', 'Peaxi162Scf00362g00542' => 'pax', 'Peaxi162Scf00461g00310' => 'pax', 'Peaxi162Scf00530g00118' => 'pax', 'Peaxi162Scf00541g00057' => 'pax', 'Peaxi162Scf00661g00017' => 'pax', 'Peaxi162Scf00926g00027' => 'pax', 'Peaxi162Scf01064g00263' => 'pax', 'Peaxi162Scf01211g00135' => 'pax', 'PGR004G2336' => 'pgr', 'PGR042G0327' => 'pgr', 'PGR042G1957' => 'pgr', 'PGR042G2003' => 'pgr', 'PGR042G3929' => 'pgr', 'PGR083G1137' => 'pgr', 'PGR083G1364' => 'pgr', 'PGSC0003DMG400003381' => 'stu', 'PGSC0003DMG400003417' => 'stu', 'PGSC0003DMG400008981' => 'stu', 'PGSC0003DMG400012417' => 'stu', 'PGSC0003DMG400012823' => 'stu', 'PGSC0003DMG400016885' => 'stu', 'PGSC0003DMG400022812' => 'stu', 'PGSC0003DMG400029726' => 'stu', 'PGSC0003DMG401009243' => 'stu', 'PGSC0003DMG401031505' => 'stu', 'PGSC0003DMG402031505' => 'stu', 'Phvul.001G017600' => 'pvu', 'Phvul.002G193500' => 'pvu', 'Phvul.002G228900' => 'pvu', 'Phvul.002G236800' => 'pvu', 'Phvul.003G049500' => 'pvu', 'Phvul.005G072000' => 'pvu', 'Phvul.006G164800' => 'pvu', 'Phvul.006G185100' => 'pvu', 'Phvul.007G090000' => 'pvu', 'Potri.001G399800' => 'ptr', 'Potri.002G149900' => 'ptr', 'Potri.004G044100' => 'ptr', 'Potri.004G177600' => 'ptr', 'Potri.009G138000' => 'ptr', 'Potri.010G094000' => 'ptr', 'Potri.011G053000' => 'ptr', 'Potri.011G119300' => 'ptr', 'Potri.013G113700' => 'ptr', 'Potri.018G107800' => 'ptr', 'Potri.019G084100' => 'ptr', 'Pp3c14_23720' => 'ppa', 'Pp3c16_6340' => 'ppa', 'Pp3c23_13420' => 'ppa', 'Pp3c24_2740' => 'ppa', 'Pp3c25_860' => 'ppa', 'Pp3c8_21750' => 'ppa', 'Prupe.1G273000' => 'ppe', 'Prupe.1G273700' => 'ppe', 'Prupe.1G274100' => 'ppe', 'Prupe.2G023300' => 'ppe', 'Prupe.4G048000' => 'ppe', 'Prupe.4G080400' => 'ppe', 'Prupe.4G181200' => 'ppe', 'Prupe.8G056900' => 'ppe', 'Prupe.8G168700' => 'ppe', 'Psat1g189080' => 'psa', 'Psat1g204760' => 'psa', 'Psat4g175560' => 'psa', 'Psat4g177720' => 'psa', 'Psat5g244240' => 'psa', 'Psat6g010720' => 'psa', 'Psat6g187200' => 'psa', 'Psat7g072040' => 'psa', 'PSO017G3501' => 'pso', 'PSO063G2148' => 'pso', 'PSO063G5608' => 'pso', 'PSO210G6392' => 'pso', 'PSO541G2319' => 'pso', 'PSO541G2836' => 'pso', 'PSO541G4012' => 'pso', 'PSO541G6253' => 'pso', 'PSO675G0580' => 'pso', 'PSO675G0856' => 'pso', 'PSO675G5635' => 'pso', 'PSO675G9157' => 'pso', 'PSO832G1660' => 'pso', 'PSO832G1969' => 'pso', 'QL02p007186' => 'qlo', 'QL02p033904' => 'qlo', 'QL03p064391' => 'qlo', 'QL05p040593' => 'qlo', 'QL05p058242' => 'qlo', 'QL08p021825' => 'qlo', 'QL11p004981' => 'qlo', 'RcHm_v2.0_Chr1g0318301' => 'rch', 'RcHm_v2.0_Chr4g0418501' => 'rch', 'RcHm_v2.0_Chr4g0439971' => 'rch', 'RcHm_v2.0_Chr5g0008541' => 'rch', 'RcHm_v2.0_Chr5g0014101' => 'rch', 'RcHm_v2.0_Chr5g0014131' => 'rch', 'RcHm_v2.0_Chr5g0033621' => 'rch', 'RcHm_v2.0_Chr6g0272041' => 'rch', 'RcHm_v2.0_Chr6g0278831' => 'rch', 'Rhsim02G0130400' => 'rsi', 'Rhsim02G0171100' => 'rsi', 'Rhsim05G0053000' => 'rsi', 'Rhsim05G0053100' => 'rsi', 'Rhsim06G0096500' => 'rsi', 'Rhsim06G0096600' => 'rsi', 'Rhsim06G0199100' => 'rsi', 'Rhsim12G0062300' => 'rsi', 'Rhsim12G0062800' => 'rsi', 'Sabra02G0118600' => 'sbr', 'Sabra04G0027300' => 'sbr', 'Sabra04G0119500' => 'sbr', 'Sabra08G0112500' => 'sbr', 'Sabra11G0036800' => 'sbr', 'Sabra11G0103800' => 'sbr', 'Sabra13G0096300' => 'sbr', 'Sabra16G0262300' => 'sbr', 'Sabra18G0091700' => 'sbr', 'Sabra19G0095400' => 'sbr', 'SalBow6G3080' => 'sbo', 'SalBow7G1157' => 'sbo', 'SalBow7G2123' => 'sbo', 'SalBow7G2285' => 'sbo', 'SalBow7G3537' => 'sbo', 'SalBow8G2947' => 'sbo', 'SalBow8G4463' => 'sbo', 'SalBow8G5466' => 'sbo', 'Sc01g0001750' => 'sci', 'Sc02g0006640' => 'sci', 'Sc02g0006670' => 'sci', 'Sc04g0008220' => 'sci', 'Sc05g0006190' => 'sci', 'Sc08g0002760' => 'sci', 'Sc17g0006170' => 'sci', 'Sc22g0002050' => 'sci', 'Sc23g0001190' => 'sci', 'Sc24g0000980' => 'sci', 'Sed0006245' => 'sed', 'Sed0007543' => 'sed', 'Sed0009411' => 'sed', 'Sed0010765' => 'sed', 'Sed0012944' => 'sed', 'Sed0014682' => 'sed', 'Sed0016174' => 'sed', 'Sed0016796' => 'sed', 'Sed0020317' => 'sed', 'Sed0021467' => 'sed', 'SEGI_01316' => 'sgi', 'SEGI_03374' => 'sgi', 'SEGI_16265' => 'sgi', 'SEGI_18569' => 'sgi', 'SEGI_20351' => 'sgi', 'SEGI_26395' => 'sgi', 'SEGI_29469' => 'sgi', 'SEGI_34771' => 'sgi', 'SEGI_36769' => 'sgi', 'SEGI_37139' => 'sgi', 'SGA_v2.0_scaffold100G29687' => 'sas', 'SGA_v2.0_scaffold118G32472' => 'sas', 'SGA_v2.0_scaffold14G07051' => 'sas', 'SGA_v2.0_scaffold183G39845' => 'sas', 'SGA_v2.0_scaffold1G00174' => 'sas', 'SGA_v2.0_scaffold22G09714' => 'sas', 'SGA_v2.0_scaffold333G48992' => 'sas', 'SGA_v2.0_scaffold46G17491' => 'sas', 'SGA_v2.0_scaffold49G18294' => 'sas', 'SGA_v2.0_scaffold63G21658' => 'sas', 'SHI01741' => 'shi', 'SHI05771' => 'shi', 'SHI18077' => 'shi', 'SHI20525' => 'shi', 'SHI20527' => 'shi', 'SHI20528' => 'shi', 'SMO172G0185' => 'smo', 'SMO198G0020' => 'smo', 'SMO351G0006' => 'smo', 'SMO356G0118' => 'smo', 'SMO358G0296' => 'smo', 'SMO367G0079' => 'smo', 'SMO367G1277' => 'smo', 'Solyc01g014220.3' => 'sly', 'Solyc01g111770.2' => 'sly', 'Solyc02g078180.3' => 'sly', 'Solyc03g006430.3' => 'sly', 'Solyc03g006456.1' => 'sly', 'Solyc03g079860.2' => 'sly', 'Solyc04g079770.3' => 'sly', 'Solyc05g007430.4' => 'sly', 'Solyc07g063150.3' => 'sly', 'Solyc08g016620.3' => 'sly', 'Solyc09g057590.3' => 'sly', 'Solyc09g057600.1' => 'sly', 'Solyc10g009050.3' => 'sly', 'Solyc11g017420.2' => 'sly', 'Sopen01g053810' => 'spe', 'Sopen02g023040' => 'spe', 'Sopen03g002440' => 'spe', 'Sopen04g033350' => 'spe', 'Sopen05g003310' => 'spe', 'Sopen07g004050' => 'spe', 'Sopen07g031340' => 'spe', 'Sopen08g006990' => 'spe', 'Sopen10g004830' => 'spe', 'Sopen11g009370' => 'spe', 'Sp1g24450' => 'spa', 'Sp1g29670' => 'spa', 'Sp1g39600' => 'spa', 'Sp2g11080' => 'spa', 'Sp2g13970' => 'spa', 'Sp4g16130' => 'spa', 'Sp6g13080' => 'spa', 'Sp7g37270' => 'spa', 'TAR371G0065' => 'tar', 'TAR376G0340' => 'tar', 'TAR376G0435' => 'tar', 'TAR381G0002' => 'tar', 'TAR381G1236' => 'tar', 'TAR624G0055' => 'tar', 'TAR624G0324' => 'tar', 'TAR624G0696' => 'tar', 'TAR624G0906' => 'tar', 'TAR625G0107' => 'tar', 'TAR626G0015' => 'tar', 'TAR626G1356' => 'tar', 'TAR627G0888' => 'tar', 'TAR628G0399' => 'tar', 'TAR628G1327' => 'tar', 'TAR629G2831' => 'tar', 'TAR629G2874' => 'tar', 'TAR633G1432' => 'tar', 'TAR633G2771' => 'tar', 'THA.LOC104803394' => 'tha', 'THA.LOC104805153' => 'tha', 'THA.LOC104806784' => 'tha', 'THA.LOC104810473' => 'tha', 'THA.LOC104813100' => 'tha', 'THA.LOC104814215' => 'tha', 'THA.LOC104815554' => 'tha', 'THA.LOC104820544' => 'tha', 'THA.LOC104824754' => 'tha', 'THA.LOC104827717' => 'tha', 'Thecc.02G031400' => 'tca', 'Thecc.02G055900' => 'tca', 'Thecc.02G350800' => 'tca', 'Thecc.06G150900' => 'tca', 'Thecc.06G186600' => 'tca', 'Thecc.07G089600' => 'tca', 'Thecc.08G020400' => 'tca', 'Thecc.08G182100' => 'tca', 'Thhalv10000873m.g' => 'esa', 'Thhalv10004185m.g' => 'esa', 'Thhalv10006981m.g' => 'esa', 'Thhalv10007204m.g' => 'esa', 'Thhalv10011374m.g' => 'esa', 'Thhalv10013482m.g' => 'esa', 'Thhalv10017801m.g' => 'esa', 'Thhalv10024983m.g' => 'esa', 'TPR.G12072' => 'tpr', 'TPR.G15769' => 'tpr', 'TPR.G16504' => 'tpr', 'TPR.G16506' => 'tpr', 'TPR.G24345' => 'tpr', 'TPR.G26666' => 'tpr', 'TPR.G27320' => 'tpr', 'TPR.G31819' => 'tpr', 'TPR.G38879' => 'tpr', 'TPR.G39015' => 'tpr', 'TPR.G8819' => 'tpr', 'TWI09G0924' => 'twi', 'TWI12G0811' => 'twi', 'TWI12G1294' => 'twi', 'TWI31G0150' => 'twi', 'TWI36G1262' => 'twi', 'TWI38G1287' => 'twi', 'TWI38G1633' => 'twi', 'TWI38G1982' => 'twi', 'TWI39G0116' => 'twi', 'TWI60G1011' => 'twi', 'TWI63G0171' => 'twi', 'TWI73G0839' => 'twi', 'TWI79G1511' => 'twi', 'unitig_0.g915' => 'ugi', 'unitig_0.g916' => 'ugi', 'unitig_21.g20219' => 'ugi', 'unitig_21.g20416' => 'ugi', 'unitig_578.g16132' => 'ugi', 'unitig_578.g16718' => 'ugi', 'unitig_62.g23481' => 'ugi', 'unitig_744.g24535' => 'ugi', 'unitig_749.g13525' => 'ugi', 'vmacro01248' => 'vma', 'vmacro02290' => 'vma', 'vmacro10946' => 'vma', 'vmacro11865' => 'vma', 'vmacro12493' => 'vma', 'vmacro17322' => 'vma', 'vmacro21599' => 'vma', 'vmacro23041' => 'vma', 'VMungo0251G0004' => 'vmu', 'VMungo0251G2639' => 'vmu', 'VMungo0251G2967' => 'vmu', 'VMungo0540G0864' => 'vmu', 'VMungo0540G1569' => 'vmu', 'VMungo0647G0317' => 'vmu', 'VMungo0720G1373' => 'vmu', 'VMungo0720G1508' => 'vmu', 'VMungo1080G0485' => 'vmu', 'VMungo1215G3177' => 'vmu', 'Zm00001eb112600' => 'zma', 'Zm00001eb120220' => 'zma', 'Zm00001eb153240' => 'zma', 'Zm00001eb168880' => 'zma', 'Zm00001eb213920' => 'zma', 'Zm00001eb228280' => 'zma', 'Zm00001eb254580' => 'zma', 'Zm00001eb272180' => 'zma', 'Zm00001eb293190' => 'zma', 'Zm00001eb322930' => 'zma', 'Zm00001eb353360' => 'zma', 'Zm00001eb353390' => 'zma', 'Zm00001eb353430' => 'zma', 'Zm00001eb353440' => 'zma', 'Zm00001eb353780' => 'zma' ), 'gf_id' => 'HOM05D000499', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000499' ), 'data_identifier' => 'HOM05D000499', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000499', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1066', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p29780' => 'bna', 'A02p33180' => 'bna', 'A03p16470' => 'bna', 'A03p66010' => 'bna', 'A04p25970' => 'bna', 'A06p01270' => 'bna', 'A06p46080' => 'bna', 'A07p11400' => 'bna', 'A08p01840' => 'bna', 'A08p08230' => 'bna', 'A08p25740' => 'bna', 'A09p32070' => 'bna', 'A09p37830' => 'bna', 'A09p42840' => 'bna', 'A09p42850' => 'bna', 'Aa31LG10G2060' => 'aar', 'Aa31LG2G7410' => 'aar', 'Aa31LG6G10200' => 'aar', 'Aa31LG6G16680' => 'aar', 'Aa31LG6G8470' => 'aar', 'Aa31LG9G12730' => 'aar', 'Aa31LG9G13680' => 'aar', 'Aa31LG9G14920' => 'aar', 'Aa31LG9G6650' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4977' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5467' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3254' => 'aag', 'Actinidia02578' => 'ach', 'Actinidia07693' => 'ach', 'Actinidia08413' => 'ach', 'Actinidia08414' => 'ach', 'Actinidia15289' => 'ach', 'Actinidia19871' => 'ach', 'Actinidia21475' => 'ach', 'Actinidia22576' => 'ach', 'Actinidia28327' => 'ach', 'Actinidia32491' => 'ach', 'Actinidia39463' => 'ach', 'Actinidia39571' => 'ach', 'Ah.01g013750' => 'amhyb', 'Ah.01g023210' => 'amhyb', 'Ah.04g164850' => 'amhyb', 'Ah.05g178060' => 'amhyb', 'Ah.07g204270' => 'amhyb', 'Ah.07g208480' => 'amhyb', 'Ah.09g237410' => 'amhyb', 'Ah.14g089460' => 'amhyb', 'AL1G41790' => 'aly', 'AL1G49050' => 'aly', 'AL1G53810' => 'aly', 'AL1G61400' => 'aly', 'AL4G18580' => 'aly', 'AL5G12510' => 'aly', 'AL5G12540' => 'aly', 'AL6G43230' => 'aly', 'AL7G10370' => 'aly', 'AL7G19250' => 'aly', 'AL8G12240' => 'aly', 'AL8G18540' => 'aly', 'Aqoxy1G02409' => 'aox', 'Aqoxy2G03993' => 'aox', 'Aqoxy3G03357' => 'aox', 'Aqoxy4G00785' => 'aox', 'Aqoxy5G02598' => 'aox', 'Aqoxy6G00132' => 'aox', 'Aqoxy7G01776' => 'aox', 'Aqoxy7G02316' => 'aox', 'Aqoxy7G03973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.12AFKW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B8730' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27IQR1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3F75VG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3RE0GA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41TCQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.527VTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FIR39' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5W8UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DA38EV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ63HS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H1I32C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HC27T5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4M8AP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7N3CZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9UVDZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LS1NQA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT1D4B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SKC4TM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCFV76' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF9Q1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQWD9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1ZM88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WE07RT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YCK7VH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJE6Q6' => 'arhy', 'AT1G28240' => 'ath', 'AT1G34550' => 'ath', 'AT1G53040' => 'ath', 'AT2G02910' => 'ath', 'AT4G09630' => 'ath', 'AT4G38500' => 'ath', 'AT5G42660' => 'ath', 'AT5G46220' => 'ath', 'ATR0152G026' => 'atr', 'ATR0564G343' => 'atr', 'ATR0706G151' => 'atr', 'ATR0733G207' => 'atr', 'ATR0751G234' => 'atr', 'ATR0807G048' => 'atr', 'ATR1091G084' => 'atr', 'Atru.chr10.1229' => 'acertr', 'Atru.chr10.1230' => 'acertr', 'Atru.chr10.1874' => 'acertr', 'Atru.chr11.1808' => 'acertr', 'Atru.chr13.1795' => 'acertr', 'Atru.chr13.570' => 'acertr', 'Atru.chr2.2608' => 'acertr', 'Atru.chr2.2609' => 'acertr', 'Atru.chr5.3428' => 'acertr', 'Atru.chr8.1171' => 'acertr', 'AUR62004651' => 'cqu', 'AUR62008675' => 'cqu', 'AUR62010014' => 'cqu', 'AUR62013004' => 'cqu', 'AUR62014825' => 'cqu', 'AUR62015015' => 'cqu', 'AUR62015151' => 'cqu', 'AUR62017020' => 'cqu', 'AUR62019422' => 'cqu', 'AUR62023570' => 'cqu', 'AUR62025571' => 'cqu', 'AUR62029098' => 'cqu', 'AUR62033863' => 'cqu', 'AUR62034296' => 'cqu', 'AUR62040075' => 'cqu', 'BcaB02g07334' => 'bca', 'BcaB02g10575' => 'bca', 'BcaB03g12119' => 'bca', 'BcaB03g12120' => 'bca', 'BcaB03g13945' => 'bca', 'BcaB04g17123' => 'bca', 'BcaB04g17867' => 'bca', 'BcaB04g19839' => 'bca', 'BcaB07g30317' => 'bca', 'BcaB07g32432' => 'bca', 'BcaB07g33362' => 'bca', 'BcaB08g36611' => 'bca', 'BcaC01g00028' => 'bca', 'BcaC01g01356' => 'bca', 'BcaC01g02034' => 'bca', 'BcaC01g06051' => 'bca', 'BcaC03g16839' => 'bca', 'BcaC03g17176' => 'bca', 'BcaC05g26829' => 'bca', 'BcaC06g31490' => 'bca', 'BcaC06g35344' => 'bca', 'BcaC06g36570' => 'bca', 'BcaC07g37537' => 'bca', 'BcaC08g43491' => 'bca', 'BcaC08g43773' => 'bca', 'BcaNung00234' => 'bca', 'BcaNung01982' => 'bca', 'BcaNung03707' => 'bca', 'BcaNung06454' => 'bca', 'BolC2t10762H' => 'bol', 'BolC2t11191H' => 'bol', 'BolC3t14322H' => 'bol', 'BolC3t19747H' => 'bol', 'BolC3t21425H' => 'bol', 'BolC4t27800H' => 'bol', 'BolC5t31423H' => 'bol', 'BolC6t35951H' => 'bol', 'BolC6t36282H' => 'bol', 'BolC7t40678H' => 'bol', 'BolC7t40679H' => 'bol', 'BolC7t42222H' => 'bol', 'BolC7t43492H' => 'bol', 'BolC7t46785H' => 'bol', 'BolC8t47853H' => 'bol', 'BolC9t56805H' => 'bol', 'BraA02t08000Z' => 'bra', 'BraA02t08341Z' => 'bra', 'BraA03t10936Z' => 'bra', 'BraA03t15657Z' => 'bra', 'BraA04t18100Z' => 'bra', 'BraA05t20523Z' => 'bra', 'BraA06t23353Z' => 'bra', 'BraA06t27473Z' => 'bra', 'BraA06t27769Z' => 'bra', 'BraA07t28928Z' => 'bra', 'BraA08t32236Z' => 'bra', 'BraA08t32841Z' => 'bra', 'BraA08t34524Z' => 'bra', 'BraA09t38742Z' => 'bra', 'BraA09t39295Z' => 'bra', 'C02p47180' => 'bna', 'C02p50990' => 'bna', 'C03p19360' => 'bna', 'C03p74950' => 'bna', 'C03p91000' => 'bna', 'C04p63260' => 'bna', 'C05p27050' => 'bna', 'C06p08750' => 'bna', 'C06p11490' => 'bna', 'C07p02820' => 'bna', 'C07p17180' => 'bna', 'C07p29440' => 'bna', 'C07p63730' => 'bna', 'C09p39260' => 'bna', 'CAN.G1164.34' => 'can', 'CAN.G1164.39' => 'can', 'CAN.G1530.3' => 'can', 'CAN.G162.61' => 'can', 'CAN.G176.6' => 'can', 'CAN.G289.49' => 'can', 'CAN.G370.21' => 'can', 'CAN.G370.22' => 'can', 'CAN.G371.117' => 'can', 'CAN.G58.37' => 'can', 'CAN.G588.98' => 'can', 'CANSAT21G2266' => 'cansat', 'CANSAT25G2799' => 'cansat', 'CANSAT35G0862' => 'cansat', 'CANSAT35G1704' => 'cansat', 'CANSAT35G1760' => 'cansat', 'CANSAT56G3971' => 'cansat', 'CANSAT56G4116' => 'cansat', 'CANSAT80G1259' => 'cansat', 'CARHR027730' => 'chi', 'CARHR033880' => 'chi', 'CARHR043270' => 'chi', 'CARHR145330' => 'chi', 'CARHR145340' => 'chi', 'CARHR175570' => 'chi', 'CARHR181570' => 'chi', 'CARHR258470' => 'chi', 'CARHR260490' => 'chi', 'CARHR294220' => 'chi', 'Carub.0001s2668' => 'cru', 'Carub.0001s3257' => 'cru', 'Carub.0001s4220' => 'cru', 'Carub.0005s0179' => 'cru', 'Carub.0006s2807' => 'cru', 'Carub.0007s0039' => 'cru', 'Carub.0008s0169' => 'cru', 'Carub.0008s0636' => 'cru', 'Ca_00338_v3' => 'car', 'Ca_00542_v3' => 'car', 'Ca_01844_v3' => 'car', 'Ca_10611_v3' => 'car', 'Ca_13326_v3' => 'car', 'Ca_17944_v3' => 'car', 'Ca_18546_v3' => 'car', 'Ca_24219_v3' => 'car', 'Ca_29972_v3' => 'car', 'CBR_g3681' => 'cbr', 'CBR_g40021' => 'cbr', 'Cc01_g08140' => 'ccan', 'Cc02_g13410' => 'ccan', 'Cc02_g37480' => 'ccan', 'Cc05_g12030' => 'ccan', 'Cc09_g03370' => 'ccan', 'Cc09_g10300' => 'ccan', 'Cc10_g03530' => 'ccan', 'Cc10_g11380' => 'ccan', 'CDE01G0176' => 'cde', 'CDE02G0675' => 'cde', 'CDE02G0942' => 'cde', 'CDE02G1153' => 'cde', 'CDE02G4177' => 'cde', 'CDE04G2117' => 'cde', 'CDE04G2736' => 'cde', 'CDE08G1161' => 'cde', 'CDE09G1238' => 'cde', 'Cfa000467' => 'cfa', 'Cfa000947' => 'cfa', 'Cfa004969' => 'cfa', 'Cfa005284' => 'cfa', 'Cfa008993' => 'cfa', 'Cfa018187' => 'cfa', 'Cfa018454' => 'cfa', 'Cfa020585' => 'cfa', 'Ciclev10000424m.g' => 'ccl', 'Ciclev10003605m.g' => 'ccl', 'Ciclev10007828m.g' => 'ccl', 'Ciclev10014620m.g' => 'ccl', 'Ciclev10015169m.g' => 'ccl', 'Ciclev10018291m.g' => 'ccl', 'Ciclev10028256m.g' => 'ccl', 'Ciclev10033822m.g' => 'ccl', 'CiPaw.05G060300' => 'cil', 'CiPaw.05G085000' => 'cil', 'CiPaw.06G083700' => 'cil', 'CiPaw.06G120300' => 'cil', 'CiPaw.09G060500' => 'cil', 'CiPaw.09G123800' => 'cil', 'CiPaw.11G169700' => 'cil', 'CiPaw.12G118300' => 'cil', 'CiPaw.15G071000' => 'cil', 'CiPaw.15G081900' => 'cil', 'ClCG01G024610' => 'cla', 'ClCG03G006070' => 'cla', 'ClCG05G019250' => 'cla', 'ClCG09G009500' => 'cla', 'ClCG11G008200' => 'cla', 'ClCG11G018080' => 'cla', 'COL.COLO4_17373' => 'col', 'COL.COLO4_22994' => 'col', 'COL.COLO4_26389' => 'col', 'COL.COLO4_27170' => 'col', 'COL.COLO4_31074' => 'col', 'COL.COLO4_31465' => 'col', 'COL.COLO4_36438' => 'col', 'COL.COLO4_36439' => 'col', 'Cpa.g.c38781' => 'cpa', 'Cpa.g.sc128.12' => 'cpa', 'Cpa.g.sc166.7' => 'cpa', 'Cpa.g.sc166.8' => 'cpa', 'Cpa.g.sc20.111' => 'cpa', 'Cpa.g.sc27.31' => 'cpa', 'Cpa.g.sc64.36' => 'cpa', 'Cpa.g.sc64.37' => 'cpa', 'Cpa.g.sc66.49' => 'cpa', 'Cpa.g.sc80.64' => 'cpa', 'CsaV3_1G012320' => 'csa', 'CsaV3_2G008480' => 'csa', 'CsaV3_2G033450' => 'csa', 'CsaV3_3G044830' => 'csa', 'CsaV3_4G033710' => 'csa', 'CsaV3_6G051730' => 'csa', 'CsaV3_7G025350' => 'csa', 'CSS0001067' => 'camsi', 'CSS0005996' => 'camsi', 'CSS0006590' => 'camsi', 'CSS0009673' => 'camsi', 'CSS0010201' => 'camsi', 'CSS0010549' => 'camsi', 'CSS0011364' => 'camsi', 'CSS0014473' => 'camsi', 'CSS0014961' => 'camsi', 'CSS0020191' => 'camsi', 'CSS0021165' => 'camsi', 'CSS0022306' => 'camsi', 'CSS0030591' => 'camsi', 'CSS0030696' => 'camsi', 'CSS0032653' => 'camsi', 'CSS0037487' => 'camsi', 'CSS0041102' => 'camsi', 'CSS0041261' => 'camsi', 'CSS0046246' => 'camsi', 'CSS0049256' => 'camsi', 'DCAR_004075' => 'dca', 'DCAR_011538' => 'dca', 'DCAR_019553' => 'dca', 'DCAR_020952' => 'dca', 'DCAR_021739' => 'dca', 'DCAR_027407' => 'dca', 'DCAR_027913' => 'dca', 'DCAR_028066' => 'dca', 'Dinv05899' => 'din', 'Dinv07563' => 'din', 'Dinv08010' => 'din', 'Dinv14125' => 'din', 'Dinv20172' => 'din', 'Dinv30743' => 'din', 'Dinv31229' => 'din', 'Dinv34162' => 'din', 'Dinv36028' => 'din', 'Dinv39368' => 'din', 'Dinv40565' => 'din', 'Dinv41706' => 'din', 'Duzib052G0089' => 'dzi', 'Duzib116G0641' => 'dzi', 'Duzib132G0069' => 'dzi', 'Duzib132G1219' => 'dzi', 'Duzib147G0278' => 'dzi', 'Duzib160G0480' => 'dzi', 'Duzib170G0661' => 'dzi', 'Duzib177G0591' => 'dzi', 'Duzib187G1353' => 'dzi', 'Duzib192G0858' => 'dzi', 'Duzib192G0883' => 'dzi', 'Duzib213G0506' => 'dzi', 'Duzib235G0289' => 'dzi', 'Duzib251G0422' => 'dzi', 'ECA232G3898' => 'eca', 'ECA233G5950' => 'eca', 'ECA234G1699' => 'eca', 'ECA234G2421' => 'eca', 'ECA236G0426' => 'eca', 'ECA236G4331' => 'eca', 'ECA248G2573' => 'eca', 'EL10Ac1g00077' => 'bvu', 'EL10Ac1g01746' => 'bvu', 'EL10Ac2g03464' => 'bvu', 'EL10Ac4g08176' => 'bvu', 'EL10Ac7g17521' => 'bvu', 'EL10Ac8g20386' => 'bvu', 'EL10Ac9g21343' => 'bvu', 'EL10Ac9g22688' => 'bvu', 'Eucgr.B03434' => 'egr', 'Eucgr.D00618' => 'egr', 'Eucgr.E02395' => 'egr', 'Eucgr.F01129' => 'egr', 'Eucgr.F02622' => 'egr', 'Eucgr.F04207' => 'egr', 'FAN01G0570' => 'fan', 'FAN03G3351' => 'fan', 'FAN06G3702' => 'fan', 'FAN07G2149' => 'fan', 'FAN10G3758' => 'fan', 'FAN11G1170' => 'fan', 'FAN11G2050' => 'fan', 'FAN11G2724' => 'fan', 'FAN12G1700' => 'fan', 'FAN12G2028' => 'fan', 'FAN15G1160' => 'fan', 'FAN15G3063' => 'fan', 'FAN16G2540' => 'fan', 'FAN16G3077' => 'fan', 'FAN16G3624' => 'fan', 'FAN17G0221' => 'fan', 'FAN20G2492' => 'fan', 'FAN20G2905' => 'fan', 'FAN21G0548' => 'fan', 'FAN21G1300' => 'fan', 'FAN22G0077' => 'fan', 'FAN22G1315' => 'fan', 'FAN24G1280' => 'fan', 'FAN24G1445' => 'fan', 'FAN24G3527' => 'fan', 'FAN25G0464' => 'fan', 'FAN25G2885' => 'fan', 'FAN25G3270' => 'fan', 'FAN27G1101' => 'fan', 'FAN27G2846' => 'fan', 'FAN27G3524' => 'fan', 'FvH4_2g11770' => 'fve', 'FvH4_2g15630' => 'fve', 'FvH4_3g05570' => 'fve', 'FvH4_3g09110' => 'fve', 'FvH4_3g19940' => 'fve', 'FvH4_4g04821' => 'fve', 'FvH4_4g31480' => 'fve', 'FvH4_7g01740' => 'fve', 'Glyma.05G130400' => 'gma', 'Glyma.05G156400' => 'gma', 'Glyma.07G197000' => 'gma', 'Glyma.08G085151' => 'gma', 'Glyma.08G114500' => 'gma', 'Glyma.08G300400' => 'gma', 'Glyma.10G215800' => 'gma', 'Glyma.12G224400' => 'gma', 'Glyma.13G179300' => 'gma', 'Glyma.13G218151' => 'gma', 'Glyma.13G238800' => 'gma', 'Glyma.13G276900' => 'gma', 'Glyma.14G078200' => 'gma', 'Glyma.15G074500' => 'gma', 'Glyma.15G094100' => 'gma', 'Glyma.17G247200' => 'gma', 'Glyma.18G120100' => 'gma', 'Glyma.20G176000' => 'gma', 'Gohir.A01G063600' => 'ghi', 'Gohir.A01G170301' => 'ghi', 'Gohir.A02G060500' => 'ghi', 'Gohir.A05G133850' => 'ghi', 'Gohir.A05G161400' => 'ghi', 'Gohir.A06G012900' => 'ghi', 'Gohir.A06G035901' => 'ghi', 'Gohir.A06G127100' => 'ghi', 'Gohir.A06G210500' => 'ghi', 'Gohir.A08G008650' => 'ghi', 'Gohir.A09G072700' => 'ghi', 'Gohir.A09G088301' => 'ghi', 'Gohir.A10G040600' => 'ghi', 'Gohir.A12G036300' => 'ghi', 'Gohir.A12G143350' => 'ghi', 'Gohir.A12G165500' => 'ghi', 'Gohir.A13G145700' => 'ghi', 'Gohir.D01G050000' => 'ghi', 'Gohir.D01G051366' => 'ghi', 'Gohir.D01G161350' => 'ghi', 'Gohir.D02G065900' => 'ghi', 'Gohir.D05G164200' => 'ghi', 'Gohir.D05G355500' => 'ghi', 'Gohir.D06G010400' => 'ghi', 'Gohir.D06G111250' => 'ghi', 'Gohir.D06G132000' => 'ghi', 'Gohir.D06G210500' => 'ghi', 'Gohir.D07G165675' => 'ghi', 'Gohir.D08G062240' => 'ghi', 'Gohir.D08G086101' => 'ghi', 'Gohir.D08G138060' => 'ghi', 'Gohir.D09G072300' => 'ghi', 'Gohir.D10G041400' => 'ghi', 'Gohir.D11G191020' => 'ghi', 'Gohir.D11G212066' => 'ghi', 'Gohir.D12G036300' => 'ghi', 'Gohir.D12G168600' => 'ghi', 'Gohir.D13G150600' => 'ghi', 'Gorai.001G057300' => 'gra', 'Gorai.002G069900' => 'gra', 'Gorai.002G200000' => 'gra', 'Gorai.003G067600' => 'gra', 'Gorai.005G074800' => 'gra', 'Gorai.006G087300' => 'gra', 'Gorai.008G037500' => 'gra', 'Gorai.008G181400' => 'gra', 'Gorai.009G169400' => 'gra', 'Gorai.009G387900' => 'gra', 'Gorai.010G013300' => 'gra', 'Gorai.010G153800' => 'gra', 'Gorai.010G255800' => 'gra', 'Gorai.011G043700' => 'gra', 'Gorai.011G198900' => 'gra', 'Gorai.013G168400' => 'gra', 'GSVIVG01005212001' => 'vvi', 'GSVIVG01006163001' => 'vvi', 'GSVIVG01009625001' => 'vvi', 'GSVIVG01014338001' => 'vvi', 'GSVIVG01020005001' => 'vvi', 'GSVIVG01021450001' => 'vvi', 'GSVIVG01023975001' => 'vvi', 'GSVIVG01034490001' => 'vvi', 'HanXRQChr04g0112071' => 'han', 'HanXRQChr05g0131151' => 'han', 'HanXRQChr09g0262371' => 'han', 'HanXRQChr09g0268401' => 'han', 'HanXRQChr10g0279241' => 'han', 'HanXRQChr10g0297961' => 'han', 'HanXRQChr11g0326231' => 'han', 'HanXRQChr11g0328471' => 'han', 'HanXRQChr16g0507941' => 'han', 'HanXRQChr17g0560211' => 'han', 'Haze_02108' => 'cav', 'Haze_02428' => 'cav', 'Haze_05593' => 'cav', 'Haze_06448' => 'cav', 'Haze_09427' => 'cav', 'Haze_12022' => 'cav', 'Haze_17612' => 'cav', 'Haze_17928' => 'cav', 'Hma1.2p1_0032F.1_g019250' => 'hma', 'Hma1.2p1_0163F.1_g072690' => 'hma', 'Hma1.2p1_0265F.1_g106710' => 'hma', 'Hma1.2p1_0286F.1_g113970' => 'hma', 'Hma1.2p1_0363F.1_g136640' => 'hma', 'Hma1.2p1_0584F.1_g183470' => 'hma', 'Hma1.2p1_0885F.1_g232570' => 'hma', 'HPP92_006022' => 'vpl', 'HPP92_007320' => 'vpl', 'HPP92_011521' => 'vpl', 'HPP92_019387' => 'vpl', 'HPP92_024038' => 'vpl', 'Hund05891' => 'sun', 'Hund06450' => 'sun', 'Hund12053' => 'sun', 'Hund16800' => 'sun', 'Hund21222' => 'sun', 'Hund22896' => 'sun', 'Hund23746' => 'sun', 'Hund27083' => 'sun', 'Lalb_Chr02g0141831' => 'lal', 'Lalb_Chr02g0141841' => 'lal', 'Lalb_Chr05g0220411' => 'lal', 'Lalb_Chr06g0162081' => 'lal', 'Lalb_Chr09g0327651' => 'lal', 'Lalb_Chr13g0295051' => 'lal', 'Lalb_Chr15g0086801' => 'lal', 'Lalb_Chr16g0383781' => 'lal', 'Lalb_Chr16g0383791' => 'lal', 'Lalb_Chr18g0055441' => 'lal', 'Lalb_Chr18g0059611' => 'lal', 'Lalb_Chr20g0109661' => 'lal', 'Lalb_Chr20g0109831' => 'lal', 'Lalb_Chr20g0121871' => 'lal', 'Lalb_Chr22g0355361' => 'lal', 'Lalb_Chr25g0286371' => 'lal', 'Lj1A1187G43' => 'lonja', 'Lj1A1205T50' => 'lonja', 'Lj1A800G33' => 'lonja', 'Lj1C1187T7' => 'lonja', 'Lj1C843T11' => 'lonja', 'Lj1g0010940' => 'lja', 'Lj2A288T69' => 'lonja', 'Lj3g0024276' => 'lja', 'Lj4A47T76' => 'lonja', 'Lj4g0005805' => 'lja', 'Lj4g0006097' => 'lja', 'Lj4g0008528' => 'lja', 'Lj4g0024907' => 'lja', 'Lj5g0012472' => 'lja', 'Lj5g0018648' => 'lja', 'Lj6C789G1' => 'lonja', 'Lj6g0004000' => 'lja', 'Lj7A292G67' => 'lonja', 'Lj7A292T64' => 'lonja', 'Lj9A400T58' => 'lonja', 'Lsat_1_v5_gn_1_126181' => 'lsa', 'Lsat_1_v5_gn_4_123041' => 'lsa', 'Lsat_1_v5_gn_4_133620' => 'lsa', 'Lsat_1_v5_gn_4_53221' => 'lsa', 'Lsat_1_v5_gn_4_71961' => 'lsa', 'Lsat_1_v5_gn_7_105241' => 'lsa', 'Lsat_1_v5_gn_7_21361' => 'lsa', 'Lsat_1_v5_gn_7_28860' => 'lsa', 'Lsat_1_v5_gn_7_31260' => 'lsa', 'Lsat_1_v5_gn_8_52801' => 'lsa', 'Manes.02G191400' => 'mes', 'Manes.03G110100' => 'mes', 'Manes.04G071100' => 'mes', 'Manes.05G100500' => 'mes', 'Manes.05G164700' => 'mes', 'Manes.15G087000' => 'mes', 'Manes.15G121500' => 'mes', 'Manes.16G028300' => 'mes', 'Manes.17G046100' => 'mes', 'Manes.17G069800' => 'mes', 'Manes.18G100500' => 'mes', 'Mapoly0002s0109' => 'mpo', 'Mapoly0024s0007' => 'mpo', 'Mapoly0089s0032' => 'mpo', 'MBI04_g42241_MAGBIO' => 'mbi', 'MBI05_g11988_MAGBIO' => 'mbi', 'MBI05_g35452_MAGBIO' => 'mbi', 'MBI07_g30179_MAGBIO' => 'mbi', 'MBI07_g35859_MAGBIO' => 'mbi', 'MBI07_g35860_MAGBIO' => 'mbi', 'MBI07_g37166_MAGBIO' => 'mbi', 'MBI08_g18172_MAGBIO' => 'mbi', 'MBI09_g08441_MAGBIO' => 'mbi', 'MBI13_g01676_MAGBIO' => 'mbi', 'MBI14_g42955_MAGBIO' => 'mbi', 'MBI16_g13161_MAGBIO' => 'mbi', 'MBI17_g27204_MAGBIO' => 'mbi', 'MBI19_g21595_MAGBIO' => 'mbi', 'MD00G1148400' => 'mdo', 'MD02G1301200' => 'mdo', 'MD03G1227800' => 'mdo', 'MD05G1041100' => 'mdo', 'MD05G1124800' => 'mdo', 'MD05G1284000' => 'mdo', 'MD05G1338800' => 'mdo', 'MD05G1338900' => 'mdo', 'MD07G1022800' => 'mdo', 'MD10G1047500' => 'mdo', 'MD10G1127500' => 'mdo', 'MD10G1262300' => 'mdo', 'MD10G1293800' => 'mdo', 'MD16G1074300' => 'mdo', 'Medtr1g021670' => 'mtr', 'Medtr1g096320' => 'mtr', 'Medtr2g013690' => 'mtr', 'Medtr2g019450' => 'mtr', 'Medtr2g085170' => 'mtr', 'Medtr4g088785' => 'mtr', 'Medtr8g055930' => 'mtr', 'Medtr8g085850' => 'mtr', 'MELO3C002605.2' => 'cme', 'MELO3C003891.2' => 'cme', 'MELO3C004012.2' => 'cme', 'MELO3C007134.2' => 'cme', 'MELO3C008118.2' => 'cme', 'MELO3C016700.2' => 'cme', 'MELO3C024127.2' => 'cme', 'MELO3C033361.2' => 'cme', 'MELO3C033362.2' => 'cme', 'Migut.C00430' => 'egut', 'Migut.C01246' => 'egut', 'Migut.E00101' => 'egut', 'Migut.H01486' => 'egut', 'Migut.H01939' => 'egut', 'Migut.K00360' => 'egut', 'Migut.M00910' => 'egut', 'Migut.M01139' => 'egut', 'Migut.N02677' => 'egut', 'MSTRG.13252' => 'ama', 'MSTRG.14701' => 'ama', 'MSTRG.1521' => 'ama', 'MSTRG.15884' => 'ama', 'MSTRG.16242' => 'ama', 'MSTRG.22285' => 'ama', 'MSTRG.22444' => 'ama', 'MSTRG.2349' => 'ama', 'MSTRG.26308' => 'ama', 'MSTRG.28296' => 'ama', 'MSTRG.9895' => 'ama', 'Nitab4.5_0000110g0060' => 'nta', 'Nitab4.5_0000420g0130' => 'nta', 'Nitab4.5_0000422g0030' => 'nta', 'Nitab4.5_0000560g0180' => 'nta', 'Nitab4.5_0000703g0100' => 'nta', 'Nitab4.5_0000786g0200' => 'nta', 'Nitab4.5_0001336g0020' => 'nta', 'Nitab4.5_0001796g0030' => 'nta', 'Nitab4.5_0003348g0060' => 'nta', 'Nitab4.5_0003698g0040' => 'nta', 'Nitab4.5_0003942g0090' => 'nta', 'Nitab4.5_0004775g0070' => 'nta', 'Nitab4.5_0004864g0030' => 'nta', 'Nitab4.5_0005615g0020' => 'nta', 'Nitab4.5_0009288g0030' => 'nta', 'Nitab4.5_0009341g0010' => 'nta', 'Nitab4.5_0009535g0010' => 'nta', 'Nn1g03995' => 'nnu', 'Nn1g04100' => 'nnu', 'Nn1g06530' => 'nnu', 'Nn3g16404' => 'nnu', 'Nn3g17212' => 'nnu', 'Nn3g20776' => 'nnu', 'Nn3g21923' => 'nnu', 'Nn5g27737' => 'nnu', 'Nn5g29461' => 'nnu', 'Nn7g38355' => 'nnu', 'Nn8g39873' => 'nnu', 'Oeu000548.2' => 'oeu', 'Oeu004672.1' => 'oeu', 'Oeu015605.2' => 'oeu', 'Oeu016092.1' => 'oeu', 'Oeu017879.3' => 'oeu', 'Oeu024910.1' => 'oeu', 'Oeu028965.1' => 'oeu', 'Oeu031269.1' => 'oeu', 'Oeu031270.1' => 'oeu', 'Oeu032535.1' => 'oeu', 'Oeu034151.1' => 'oeu', 'Oeu034152.1' => 'oeu', 'Oeu034588.2' => 'oeu', 'Oeu050846.1' => 'oeu', 'Oeu050849.2' => 'oeu', 'Oeu051063.2' => 'oeu', 'Oeu052368.1' => 'oeu', 'Oeu052370.1' => 'oeu', 'Os01g0210400' => 'osa', 'Os01g0304300' => 'osa', 'Os01g0749100' => 'osa', 'Os02g0745800' => 'osa', 'Os03g0769050' => 'osa', 'Os05g0531500' => 'osa', 'Os06g0724300' => 'osa', 'Os11g0198100' => 'osa', 'Peaxi162Scf00069g01425' => 'pax', 'Peaxi162Scf00280g00811' => 'pax', 'Peaxi162Scf00310g00615' => 'pax', 'Peaxi162Scf00362g00542' => 'pax', 'Peaxi162Scf00461g00310' => 'pax', 'Peaxi162Scf00530g00118' => 'pax', 'Peaxi162Scf00541g00057' => 'pax', 'Peaxi162Scf00661g00017' => 'pax', 'Peaxi162Scf00926g00027' => 'pax', 'Peaxi162Scf01064g00263' => 'pax', 'Peaxi162Scf01211g00135' => 'pax', 'PGR004G2336' => 'pgr', 'PGR042G0327' => 'pgr', 'PGR042G1957' => 'pgr', 'PGR042G2003' => 'pgr', 'PGR042G3929' => 'pgr', 'PGR083G1137' => 'pgr', 'PGR083G1364' => 'pgr', 'PGSC0003DMG400003381' => 'stu', 'PGSC0003DMG400003417' => 'stu', 'PGSC0003DMG400008981' => 'stu', 'PGSC0003DMG400012417' => 'stu', 'PGSC0003DMG400012823' => 'stu', 'PGSC0003DMG400016885' => 'stu', 'PGSC0003DMG400022812' => 'stu', 'PGSC0003DMG400029726' => 'stu', 'PGSC0003DMG401009243' => 'stu', 'PGSC0003DMG401031505' => 'stu', 'PGSC0003DMG402031505' => 'stu', 'Phvul.001G017600' => 'pvu', 'Phvul.002G193500' => 'pvu', 'Phvul.002G228900' => 'pvu', 'Phvul.002G236800' => 'pvu', 'Phvul.003G049500' => 'pvu', 'Phvul.005G072000' => 'pvu', 'Phvul.006G164800' => 'pvu', 'Phvul.006G185100' => 'pvu', 'Phvul.007G090000' => 'pvu', 'Potri.001G399800' => 'ptr', 'Potri.002G149900' => 'ptr', 'Potri.004G044100' => 'ptr', 'Potri.004G177600' => 'ptr', 'Potri.009G138000' => 'ptr', 'Potri.010G094000' => 'ptr', 'Potri.011G053000' => 'ptr', 'Potri.011G119300' => 'ptr', 'Potri.013G113700' => 'ptr', 'Potri.018G107800' => 'ptr', 'Potri.019G084100' => 'ptr', 'Pp3c14_23720' => 'ppa', 'Pp3c16_6340' => 'ppa', 'Pp3c23_13420' => 'ppa', 'Pp3c24_2740' => 'ppa', 'Pp3c25_860' => 'ppa', 'Pp3c8_21750' => 'ppa', 'Prupe.1G273000' => 'ppe', 'Prupe.1G273700' => 'ppe', 'Prupe.1G274100' => 'ppe', 'Prupe.2G023300' => 'ppe', 'Prupe.4G048000' => 'ppe', 'Prupe.4G080400' => 'ppe', 'Prupe.4G181200' => 'ppe', 'Prupe.8G056900' => 'ppe', 'Prupe.8G168700' => 'ppe', 'Psat1g189080' => 'psa', 'Psat1g204760' => 'psa', 'Psat4g175560' => 'psa', 'Psat4g177720' => 'psa', 'Psat5g244240' => 'psa', 'Psat6g010720' => 'psa', 'Psat6g187200' => 'psa', 'Psat7g072040' => 'psa', 'PSO017G3501' => 'pso', 'PSO063G2148' => 'pso', 'PSO063G5608' => 'pso', 'PSO210G6392' => 'pso', 'PSO541G2319' => 'pso', 'PSO541G2836' => 'pso', 'PSO541G4012' => 'pso', 'PSO541G6253' => 'pso', 'PSO675G0580' => 'pso', 'PSO675G0856' => 'pso', 'PSO675G5635' => 'pso', 'PSO675G9157' => 'pso', 'PSO832G1660' => 'pso', 'PSO832G1969' => 'pso', 'QL02p007186' => 'qlo', 'QL02p033904' => 'qlo', 'QL03p064391' => 'qlo', 'QL05p040593' => 'qlo', 'QL05p058242' => 'qlo', 'QL08p021825' => 'qlo', 'QL11p004981' => 'qlo', 'RcHm_v2.0_Chr1g0318301' => 'rch', 'RcHm_v2.0_Chr4g0418501' => 'rch', 'RcHm_v2.0_Chr4g0439971' => 'rch', 'RcHm_v2.0_Chr5g0008541' => 'rch', 'RcHm_v2.0_Chr5g0014101' => 'rch', 'RcHm_v2.0_Chr5g0014131' => 'rch', 'RcHm_v2.0_Chr5g0033621' => 'rch', 'RcHm_v2.0_Chr6g0272041' => 'rch', 'RcHm_v2.0_Chr6g0278831' => 'rch', 'Rhsim02G0130400' => 'rsi', 'Rhsim02G0171100' => 'rsi', 'Rhsim05G0053000' => 'rsi', 'Rhsim05G0053100' => 'rsi', 'Rhsim06G0096500' => 'rsi', 'Rhsim06G0096600' => 'rsi', 'Rhsim06G0199100' => 'rsi', 'Rhsim12G0062300' => 'rsi', 'Rhsim12G0062800' => 'rsi', 'Sabra02G0118600' => 'sbr', 'Sabra04G0027300' => 'sbr', 'Sabra04G0119500' => 'sbr', 'Sabra08G0112500' => 'sbr', 'Sabra11G0036800' => 'sbr', 'Sabra11G0103800' => 'sbr', 'Sabra13G0096300' => 'sbr', 'Sabra16G0262300' => 'sbr', 'Sabra18G0091700' => 'sbr', 'Sabra19G0095400' => 'sbr', 'SalBow6G3080' => 'sbo', 'SalBow7G1157' => 'sbo', 'SalBow7G2123' => 'sbo', 'SalBow7G2285' => 'sbo', 'SalBow7G3537' => 'sbo', 'SalBow8G2947' => 'sbo', 'SalBow8G4463' => 'sbo', 'SalBow8G5466' => 'sbo', 'Sc01g0001750' => 'sci', 'Sc02g0006640' => 'sci', 'Sc02g0006670' => 'sci', 'Sc04g0008220' => 'sci', 'Sc05g0006190' => 'sci', 'Sc08g0002760' => 'sci', 'Sc17g0006170' => 'sci', 'Sc22g0002050' => 'sci', 'Sc23g0001190' => 'sci', 'Sc24g0000980' => 'sci', 'Sed0006245' => 'sed', 'Sed0007543' => 'sed', 'Sed0009411' => 'sed', 'Sed0010765' => 'sed', 'Sed0012944' => 'sed', 'Sed0014682' => 'sed', 'Sed0016174' => 'sed', 'Sed0016796' => 'sed', 'Sed0020317' => 'sed', 'Sed0021467' => 'sed', 'SEGI_01316' => 'sgi', 'SEGI_03374' => 'sgi', 'SEGI_16265' => 'sgi', 'SEGI_18569' => 'sgi', 'SEGI_20351' => 'sgi', 'SEGI_26395' => 'sgi', 'SEGI_29469' => 'sgi', 'SEGI_34771' => 'sgi', 'SEGI_36769' => 'sgi', 'SEGI_37139' => 'sgi', 'SGA_v2.0_scaffold100G29687' => 'sas', 'SGA_v2.0_scaffold118G32472' => 'sas', 'SGA_v2.0_scaffold14G07051' => 'sas', 'SGA_v2.0_scaffold183G39845' => 'sas', 'SGA_v2.0_scaffold1G00174' => 'sas', 'SGA_v2.0_scaffold22G09714' => 'sas', 'SGA_v2.0_scaffold333G48992' => 'sas', 'SGA_v2.0_scaffold46G17491' => 'sas', 'SGA_v2.0_scaffold49G18294' => 'sas', 'SGA_v2.0_scaffold63G21658' => 'sas', 'SHI01741' => 'shi', 'SHI05771' => 'shi', 'SHI18077' => 'shi', 'SHI20525' => 'shi', 'SHI20527' => 'shi', 'SHI20528' => 'shi', 'SMO172G0185' => 'smo', 'SMO198G0020' => 'smo', 'SMO351G0006' => 'smo', 'SMO356G0118' => 'smo', 'SMO358G0296' => 'smo', 'SMO367G0079' => 'smo', 'SMO367G1277' => 'smo', 'Solyc01g014220.3' => 'sly', 'Solyc01g111770.2' => 'sly', 'Solyc02g078180.3' => 'sly', 'Solyc03g006430.3' => 'sly', 'Solyc03g006456.1' => 'sly', 'Solyc03g079860.2' => 'sly', 'Solyc04g079770.3' => 'sly', 'Solyc05g007430.4' => 'sly', 'Solyc07g063150.3' => 'sly', 'Solyc08g016620.3' => 'sly', 'Solyc09g057590.3' => 'sly', 'Solyc09g057600.1' => 'sly', 'Solyc10g009050.3' => 'sly', 'Solyc11g017420.2' => 'sly', 'Sopen01g053810' => 'spe', 'Sopen02g023040' => 'spe', 'Sopen03g002440' => 'spe', 'Sopen04g033350' => 'spe', 'Sopen05g003310' => 'spe', 'Sopen07g004050' => 'spe', 'Sopen07g031340' => 'spe', 'Sopen08g006990' => 'spe', 'Sopen10g004830' => 'spe', 'Sopen11g009370' => 'spe', 'Sp1g24450' => 'spa', 'Sp1g29670' => 'spa', 'Sp1g39600' => 'spa', 'Sp2g11080' => 'spa', 'Sp2g13970' => 'spa', 'Sp4g16130' => 'spa', 'Sp6g13080' => 'spa', 'Sp7g37270' => 'spa', 'TAR371G0065' => 'tar', 'TAR376G0340' => 'tar', 'TAR376G0435' => 'tar', 'TAR381G0002' => 'tar', 'TAR381G1236' => 'tar', 'TAR624G0055' => 'tar', 'TAR624G0324' => 'tar', 'TAR624G0696' => 'tar', 'TAR624G0906' => 'tar', 'TAR625G0107' => 'tar', 'TAR626G0015' => 'tar', 'TAR626G1356' => 'tar', 'TAR627G0888' => 'tar', 'TAR628G0399' => 'tar', 'TAR628G1327' => 'tar', 'TAR629G2831' => 'tar', 'TAR629G2874' => 'tar', 'TAR633G1432' => 'tar', 'TAR633G2771' => 'tar', 'THA.LOC104803394' => 'tha', 'THA.LOC104805153' => 'tha', 'THA.LOC104806784' => 'tha', 'THA.LOC104810473' => 'tha', 'THA.LOC104813100' => 'tha', 'THA.LOC104814215' => 'tha', 'THA.LOC104815554' => 'tha', 'THA.LOC104820544' => 'tha', 'THA.LOC104824754' => 'tha', 'THA.LOC104827717' => 'tha', 'Thecc.02G031400' => 'tca', 'Thecc.02G055900' => 'tca', 'Thecc.02G350800' => 'tca', 'Thecc.06G150900' => 'tca', 'Thecc.06G186600' => 'tca', 'Thecc.07G089600' => 'tca', 'Thecc.08G020400' => 'tca', 'Thecc.08G182100' => 'tca', 'Thhalv10000873m.g' => 'esa', 'Thhalv10004185m.g' => 'esa', 'Thhalv10006981m.g' => 'esa', 'Thhalv10007204m.g' => 'esa', 'Thhalv10011374m.g' => 'esa', 'Thhalv10013482m.g' => 'esa', 'Thhalv10017801m.g' => 'esa', 'Thhalv10024983m.g' => 'esa', 'TPR.G12072' => 'tpr', 'TPR.G15769' => 'tpr', 'TPR.G16504' => 'tpr', 'TPR.G16506' => 'tpr', 'TPR.G24345' => 'tpr', 'TPR.G26666' => 'tpr', 'TPR.G27320' => 'tpr', 'TPR.G31819' => 'tpr', 'TPR.G38879' => 'tpr', 'TPR.G39015' => 'tpr', 'TPR.G8819' => 'tpr', 'TWI09G0924' => 'twi', 'TWI12G0811' => 'twi', 'TWI12G1294' => 'twi', 'TWI31G0150' => 'twi', 'TWI36G1262' => 'twi', 'TWI38G1287' => 'twi', 'TWI38G1633' => 'twi', 'TWI38G1982' => 'twi', 'TWI39G0116' => 'twi', 'TWI60G1011' => 'twi', 'TWI63G0171' => 'twi', 'TWI73G0839' => 'twi', 'TWI79G1511' => 'twi', 'unitig_0.g915' => 'ugi', 'unitig_0.g916' => 'ugi', 'unitig_21.g20219' => 'ugi', 'unitig_21.g20416' => 'ugi', 'unitig_578.g16132' => 'ugi', 'unitig_578.g16718' => 'ugi', 'unitig_62.g23481' => 'ugi', 'unitig_744.g24535' => 'ugi', 'unitig_749.g13525' => 'ugi', 'vmacro01248' => 'vma', 'vmacro02290' => 'vma', 'vmacro10946' => 'vma', 'vmacro11865' => 'vma', 'vmacro12493' => 'vma', 'vmacro17322' => 'vma', 'vmacro21599' => 'vma', 'vmacro23041' => 'vma', 'VMungo0251G0004' => 'vmu', 'VMungo0251G2639' => 'vmu', 'VMungo0251G2967' => 'vmu', 'VMungo0540G0864' => 'vmu', 'VMungo0540G1569' => 'vmu', 'VMungo0647G0317' => 'vmu', 'VMungo0720G1373' => 'vmu', 'VMungo0720G1508' => 'vmu', 'VMungo1080G0485' => 'vmu', 'VMungo1215G3177' => 'vmu', 'Zm00001eb112600' => 'zma', 'Zm00001eb120220' => 'zma', 'Zm00001eb153240' => 'zma', 'Zm00001eb168880' => 'zma', 'Zm00001eb213920' => 'zma', 'Zm00001eb228280' => 'zma', 'Zm00001eb254580' => 'zma', 'Zm00001eb272180' => 'zma', 'Zm00001eb293190' => 'zma', 'Zm00001eb322930' => 'zma', 'Zm00001eb353360' => 'zma', 'Zm00001eb353390' => 'zma', 'Zm00001eb353430' => 'zma', 'Zm00001eb353440' => 'zma', 'Zm00001eb353780' => 'zma' ) $gf_id = 'HOM05D000499' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000499' ) $data_identifier = 'HOM05D000499' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 29, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 12, 'amhyb' => (int) 8, 'aly' => (int) 12, 'aox' => (int) 9, 'arhy' => (int) 26, 'ath' => (int) 8, 'atr' => (int) 7, 'acertr' => (int) 10, 'cqu' => (int) 15, 'bca' => (int) 29, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 11, 'cansat' => (int) 8, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 9, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 8, 'cpa' => (int) 10, 'csa' => (int) 7, 'camsi' => (int) 20, 'dca' => (int) 8, 'din' => (int) 12, 'dzi' => (int) 14, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 6, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 38, 'gra' => (int) 16, 'vvi' => (int) 8, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 5, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 11, 'lja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 11, 'mpo' => (int) 3, 'mbi' => (int) 14, 'mdo' => (int) 14, 'mtr' => (int) 8, 'cme' => (int) 9, 'egut' => (int) 9, 'ama' => (int) 11, 'nta' => (int) 17, 'nnu' => (int) 11, 'oeu' => (int) 18, 'osa' => (int) 8, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 6, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 9, 'rsi' => (int) 9, 'sbr' => (int) 10, 'sbo' => (int) 8, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 10, 'sas' => (int) 10, 'shi' => (int) 6, 'smo' => (int) 7, 'sly' => (int) 14, 'spe' => (int) 10, 'spa' => (int) 8, 'tar' => (int) 19, 'tha' => (int) 10, 'tca' => (int) 8, 'esa' => (int) 8, 'tpr' => (int) 11, 'twi' => (int) 13, 'ugi' => (int) 9, 'vma' => (int) 8, 'vmu' => (int) 10, 'zma' => (int) 15 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb353780' $species_info = array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ) $local_species = 'aag' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000499', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1066', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p29780' => 'bna', 'A02p33180' => 'bna', 'A03p16470' => 'bna', 'A03p66010' => 'bna', 'A04p25970' => 'bna', 'A06p01270' => 'bna', 'A06p46080' => 'bna', 'A07p11400' => 'bna', 'A08p01840' => 'bna', 'A08p08230' => 'bna', 'A08p25740' => 'bna', 'A09p32070' => 'bna', 'A09p37830' => 'bna', 'A09p42840' => 'bna', 'A09p42850' => 'bna', 'Aa31LG10G2060' => 'aar', 'Aa31LG2G7410' => 'aar', 'Aa31LG6G10200' => 'aar', 'Aa31LG6G16680' => 'aar', 'Aa31LG6G8470' => 'aar', 'Aa31LG9G12730' => 'aar', 'Aa31LG9G13680' => 'aar', 'Aa31LG9G14920' => 'aar', 'Aa31LG9G6650' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4977' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5467' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3254' => 'aag', 'Actinidia02578' => 'ach', 'Actinidia07693' => 'ach', 'Actinidia08413' => 'ach', 'Actinidia08414' => 'ach', 'Actinidia15289' => 'ach', 'Actinidia19871' => 'ach', 'Actinidia21475' => 'ach', 'Actinidia22576' => 'ach', 'Actinidia28327' => 'ach', 'Actinidia32491' => 'ach', 'Actinidia39463' => 'ach', 'Actinidia39571' => 'ach', 'Ah.01g013750' => 'amhyb', 'Ah.01g023210' => 'amhyb', 'Ah.04g164850' => 'amhyb', 'Ah.05g178060' => 'amhyb', 'Ah.07g204270' => 'amhyb', 'Ah.07g208480' => 'amhyb', 'Ah.09g237410' => 'amhyb', 'Ah.14g089460' => 'amhyb', 'AL1G41790' => 'aly', 'AL1G49050' => 'aly', 'AL1G53810' => 'aly', 'AL1G61400' => 'aly', 'AL4G18580' => 'aly', 'AL5G12510' => 'aly', 'AL5G12540' => 'aly', 'AL6G43230' => 'aly', 'AL7G10370' => 'aly', 'AL7G19250' => 'aly', 'AL8G12240' => 'aly', 'AL8G18540' => 'aly', 'Aqoxy1G02409' => 'aox', 'Aqoxy2G03993' => 'aox', 'Aqoxy3G03357' => 'aox', 'Aqoxy4G00785' => 'aox', 'Aqoxy5G02598' => 'aox', 'Aqoxy6G00132' => 'aox', 'Aqoxy7G01776' => 'aox', 'Aqoxy7G02316' => 'aox', 'Aqoxy7G03973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.12AFKW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B8730' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27IQR1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3F75VG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3RE0GA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41TCQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.527VTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FIR39' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5W8UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DA38EV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ63HS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H1I32C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HC27T5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4M8AP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7N3CZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9UVDZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LS1NQA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT1D4B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SKC4TM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCFV76' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF9Q1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQWD9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1ZM88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WE07RT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YCK7VH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJE6Q6' => 'arhy', 'AT1G28240' => 'ath', 'AT1G34550' => 'ath', 'AT1G53040' => 'ath', 'AT2G02910' => 'ath', 'AT4G09630' => 'ath', 'AT4G38500' => 'ath', 'AT5G42660' => 'ath', 'AT5G46220' => 'ath', 'ATR0152G026' => 'atr', 'ATR0564G343' => 'atr', 'ATR0706G151' => 'atr', 'ATR0733G207' => 'atr', 'ATR0751G234' => 'atr', 'ATR0807G048' => 'atr', 'ATR1091G084' => 'atr', 'Atru.chr10.1229' => 'acertr', 'Atru.chr10.1230' => 'acertr', 'Atru.chr10.1874' => 'acertr', 'Atru.chr11.1808' => 'acertr', 'Atru.chr13.1795' => 'acertr', 'Atru.chr13.570' => 'acertr', 'Atru.chr2.2608' => 'acertr', 'Atru.chr2.2609' => 'acertr', 'Atru.chr5.3428' => 'acertr', 'Atru.chr8.1171' => 'acertr', 'AUR62004651' => 'cqu', 'AUR62008675' => 'cqu', 'AUR62010014' => 'cqu', 'AUR62013004' => 'cqu', 'AUR62014825' => 'cqu', 'AUR62015015' => 'cqu', 'AUR62015151' => 'cqu', 'AUR62017020' => 'cqu', 'AUR62019422' => 'cqu', 'AUR62023570' => 'cqu', 'AUR62025571' => 'cqu', 'AUR62029098' => 'cqu', 'AUR62033863' => 'cqu', 'AUR62034296' => 'cqu', 'AUR62040075' => 'cqu', 'BcaB02g07334' => 'bca', 'BcaB02g10575' => 'bca', 'BcaB03g12119' => 'bca', 'BcaB03g12120' => 'bca', 'BcaB03g13945' => 'bca', 'BcaB04g17123' => 'bca', 'BcaB04g17867' => 'bca', 'BcaB04g19839' => 'bca', 'BcaB07g30317' => 'bca', 'BcaB07g32432' => 'bca', 'BcaB07g33362' => 'bca', 'BcaB08g36611' => 'bca', 'BcaC01g00028' => 'bca', 'BcaC01g01356' => 'bca', 'BcaC01g02034' => 'bca', 'BcaC01g06051' => 'bca', 'BcaC03g16839' => 'bca', 'BcaC03g17176' => 'bca', 'BcaC05g26829' => 'bca', 'BcaC06g31490' => 'bca', 'BcaC06g35344' => 'bca', 'BcaC06g36570' => 'bca', 'BcaC07g37537' => 'bca', 'BcaC08g43491' => 'bca', 'BcaC08g43773' => 'bca', 'BcaNung00234' => 'bca', 'BcaNung01982' => 'bca', 'BcaNung03707' => 'bca', 'BcaNung06454' => 'bca', 'BolC2t10762H' => 'bol', 'BolC2t11191H' => 'bol', 'BolC3t14322H' => 'bol', 'BolC3t19747H' => 'bol', 'BolC3t21425H' => 'bol', 'BolC4t27800H' => 'bol', 'BolC5t31423H' => 'bol', 'BolC6t35951H' => 'bol', 'BolC6t36282H' => 'bol', 'BolC7t40678H' => 'bol', 'BolC7t40679H' => 'bol', 'BolC7t42222H' => 'bol', 'BolC7t43492H' => 'bol', 'BolC7t46785H' => 'bol', 'BolC8t47853H' => 'bol', 'BolC9t56805H' => 'bol', 'BraA02t08000Z' => 'bra', 'BraA02t08341Z' => 'bra', 'BraA03t10936Z' => 'bra', 'BraA03t15657Z' => 'bra', 'BraA04t18100Z' => 'bra', 'BraA05t20523Z' => 'bra', 'BraA06t23353Z' => 'bra', 'BraA06t27473Z' => 'bra', 'BraA06t27769Z' => 'bra', 'BraA07t28928Z' => 'bra', 'BraA08t32236Z' => 'bra', 'BraA08t32841Z' => 'bra', 'BraA08t34524Z' => 'bra', 'BraA09t38742Z' => 'bra', 'BraA09t39295Z' => 'bra', 'C02p47180' => 'bna', 'C02p50990' => 'bna', 'C03p19360' => 'bna', 'C03p74950' => 'bna', 'C03p91000' => 'bna', 'C04p63260' => 'bna', 'C05p27050' => 'bna', 'C06p08750' => 'bna', 'C06p11490' => 'bna', 'C07p02820' => 'bna', 'C07p17180' => 'bna', 'C07p29440' => 'bna', 'C07p63730' => 'bna', 'C09p39260' => 'bna', 'CAN.G1164.34' => 'can', 'CAN.G1164.39' => 'can', 'CAN.G1530.3' => 'can', 'CAN.G162.61' => 'can', 'CAN.G176.6' => 'can', 'CAN.G289.49' => 'can', 'CAN.G370.21' => 'can', 'CAN.G370.22' => 'can', 'CAN.G371.117' => 'can', 'CAN.G58.37' => 'can', 'CAN.G588.98' => 'can', 'CANSAT21G2266' => 'cansat', 'CANSAT25G2799' => 'cansat', 'CANSAT35G0862' => 'cansat', 'CANSAT35G1704' => 'cansat', 'CANSAT35G1760' => 'cansat', 'CANSAT56G3971' => 'cansat', 'CANSAT56G4116' => 'cansat', 'CANSAT80G1259' => 'cansat', 'CARHR027730' => 'chi', 'CARHR033880' => 'chi', 'CARHR043270' => 'chi', 'CARHR145330' => 'chi', 'CARHR145340' => 'chi', 'CARHR175570' => 'chi', 'CARHR181570' => 'chi', 'CARHR258470' => 'chi', 'CARHR260490' => 'chi', 'CARHR294220' => 'chi', 'Carub.0001s2668' => 'cru', 'Carub.0001s3257' => 'cru', 'Carub.0001s4220' => 'cru', 'Carub.0005s0179' => 'cru', 'Carub.0006s2807' => 'cru', 'Carub.0007s0039' => 'cru', 'Carub.0008s0169' => 'cru', 'Carub.0008s0636' => 'cru', 'Ca_00338_v3' => 'car', 'Ca_00542_v3' => 'car', 'Ca_01844_v3' => 'car', 'Ca_10611_v3' => 'car', 'Ca_13326_v3' => 'car', 'Ca_17944_v3' => 'car', 'Ca_18546_v3' => 'car', 'Ca_24219_v3' => 'car', 'Ca_29972_v3' => 'car', 'CBR_g3681' => 'cbr', 'CBR_g40021' => 'cbr', 'Cc01_g08140' => 'ccan', 'Cc02_g13410' => 'ccan', 'Cc02_g37480' => 'ccan', 'Cc05_g12030' => 'ccan', 'Cc09_g03370' => 'ccan', 'Cc09_g10300' => 'ccan', 'Cc10_g03530' => 'ccan', 'Cc10_g11380' => 'ccan', 'CDE01G0176' => 'cde', 'CDE02G0675' => 'cde', 'CDE02G0942' => 'cde', 'CDE02G1153' => 'cde', 'CDE02G4177' => 'cde', 'CDE04G2117' => 'cde', 'CDE04G2736' => 'cde', 'CDE08G1161' => 'cde', 'CDE09G1238' => 'cde', 'Cfa000467' => 'cfa', 'Cfa000947' => 'cfa', 'Cfa004969' => 'cfa', 'Cfa005284' => 'cfa', 'Cfa008993' => 'cfa', 'Cfa018187' => 'cfa', 'Cfa018454' => 'cfa', 'Cfa020585' => 'cfa', 'Ciclev10000424m.g' => 'ccl', 'Ciclev10003605m.g' => 'ccl', 'Ciclev10007828m.g' => 'ccl', 'Ciclev10014620m.g' => 'ccl', 'Ciclev10015169m.g' => 'ccl', 'Ciclev10018291m.g' => 'ccl', 'Ciclev10028256m.g' => 'ccl', 'Ciclev10033822m.g' => 'ccl', 'CiPaw.05G060300' => 'cil', 'CiPaw.05G085000' => 'cil', 'CiPaw.06G083700' => 'cil', 'CiPaw.06G120300' => 'cil', 'CiPaw.09G060500' => 'cil', 'CiPaw.09G123800' => 'cil', 'CiPaw.11G169700' => 'cil', 'CiPaw.12G118300' => 'cil', 'CiPaw.15G071000' => 'cil', 'CiPaw.15G081900' => 'cil', 'ClCG01G024610' => 'cla', 'ClCG03G006070' => 'cla', 'ClCG05G019250' => 'cla', 'ClCG09G009500' => 'cla', 'ClCG11G008200' => 'cla', 'ClCG11G018080' => 'cla', 'COL.COLO4_17373' => 'col', 'COL.COLO4_22994' => 'col', 'COL.COLO4_26389' => 'col', 'COL.COLO4_27170' => 'col', 'COL.COLO4_31074' => 'col', 'COL.COLO4_31465' => 'col', 'COL.COLO4_36438' => 'col', 'COL.COLO4_36439' => 'col', 'Cpa.g.c38781' => 'cpa', 'Cpa.g.sc128.12' => 'cpa', 'Cpa.g.sc166.7' => 'cpa', 'Cpa.g.sc166.8' => 'cpa', 'Cpa.g.sc20.111' => 'cpa', 'Cpa.g.sc27.31' => 'cpa', 'Cpa.g.sc64.36' => 'cpa', 'Cpa.g.sc64.37' => 'cpa', 'Cpa.g.sc66.49' => 'cpa', 'Cpa.g.sc80.64' => 'cpa', 'CsaV3_1G012320' => 'csa', 'CsaV3_2G008480' => 'csa', 'CsaV3_2G033450' => 'csa', 'CsaV3_3G044830' => 'csa', 'CsaV3_4G033710' => 'csa', 'CsaV3_6G051730' => 'csa', 'CsaV3_7G025350' => 'csa', 'CSS0001067' => 'camsi', 'CSS0005996' => 'camsi', 'CSS0006590' => 'camsi', 'CSS0009673' => 'camsi', 'CSS0010201' => 'camsi', 'CSS0010549' => 'camsi', 'CSS0011364' => 'camsi', 'CSS0014473' => 'camsi', 'CSS0014961' => 'camsi', 'CSS0020191' => 'camsi', 'CSS0021165' => 'camsi', 'CSS0022306' => 'camsi', 'CSS0030591' => 'camsi', 'CSS0030696' => 'camsi', 'CSS0032653' => 'camsi', 'CSS0037487' => 'camsi', 'CSS0041102' => 'camsi', 'CSS0041261' => 'camsi', 'CSS0046246' => 'camsi', 'CSS0049256' => 'camsi', 'DCAR_004075' => 'dca', 'DCAR_011538' => 'dca', 'DCAR_019553' => 'dca', 'DCAR_020952' => 'dca', 'DCAR_021739' => 'dca', 'DCAR_027407' => 'dca', 'DCAR_027913' => 'dca', 'DCAR_028066' => 'dca', 'Dinv05899' => 'din', 'Dinv07563' => 'din', 'Dinv08010' => 'din', 'Dinv14125' => 'din', 'Dinv20172' => 'din', 'Dinv30743' => 'din', 'Dinv31229' => 'din', 'Dinv34162' => 'din', 'Dinv36028' => 'din', 'Dinv39368' => 'din', 'Dinv40565' => 'din', 'Dinv41706' => 'din', 'Duzib052G0089' => 'dzi', 'Duzib116G0641' => 'dzi', 'Duzib132G0069' => 'dzi', 'Duzib132G1219' => 'dzi', 'Duzib147G0278' => 'dzi', 'Duzib160G0480' => 'dzi', 'Duzib170G0661' => 'dzi', 'Duzib177G0591' => 'dzi', 'Duzib187G1353' => 'dzi', 'Duzib192G0858' => 'dzi', 'Duzib192G0883' => 'dzi', 'Duzib213G0506' => 'dzi', 'Duzib235G0289' => 'dzi', 'Duzib251G0422' => 'dzi', 'ECA232G3898' => 'eca', 'ECA233G5950' => 'eca', 'ECA234G1699' => 'eca', 'ECA234G2421' => 'eca', 'ECA236G0426' => 'eca', 'ECA236G4331' => 'eca', 'ECA248G2573' => 'eca', 'EL10Ac1g00077' => 'bvu', 'EL10Ac1g01746' => 'bvu', 'EL10Ac2g03464' => 'bvu', 'EL10Ac4g08176' => 'bvu', 'EL10Ac7g17521' => 'bvu', 'EL10Ac8g20386' => 'bvu', 'EL10Ac9g21343' => 'bvu', 'EL10Ac9g22688' => 'bvu', 'Eucgr.B03434' => 'egr', 'Eucgr.D00618' => 'egr', 'Eucgr.E02395' => 'egr', 'Eucgr.F01129' => 'egr', 'Eucgr.F02622' => 'egr', 'Eucgr.F04207' => 'egr', 'FAN01G0570' => 'fan', 'FAN03G3351' => 'fan', 'FAN06G3702' => 'fan', 'FAN07G2149' => 'fan', 'FAN10G3758' => 'fan', 'FAN11G1170' => 'fan', 'FAN11G2050' => 'fan', 'FAN11G2724' => 'fan', 'FAN12G1700' => 'fan', 'FAN12G2028' => 'fan', 'FAN15G1160' => 'fan', 'FAN15G3063' => 'fan', 'FAN16G2540' => 'fan', 'FAN16G3077' => 'fan', 'FAN16G3624' => 'fan', 'FAN17G0221' => 'fan', 'FAN20G2492' => 'fan', 'FAN20G2905' => 'fan', 'FAN21G0548' => 'fan', 'FAN21G1300' => 'fan', 'FAN22G0077' => 'fan', 'FAN22G1315' => 'fan', 'FAN24G1280' => 'fan', 'FAN24G1445' => 'fan', 'FAN24G3527' => 'fan', 'FAN25G0464' => 'fan', 'FAN25G2885' => 'fan', 'FAN25G3270' => 'fan', 'FAN27G1101' => 'fan', 'FAN27G2846' => 'fan', 'FAN27G3524' => 'fan', 'FvH4_2g11770' => 'fve', 'FvH4_2g15630' => 'fve', 'FvH4_3g05570' => 'fve', 'FvH4_3g09110' => 'fve', 'FvH4_3g19940' => 'fve', 'FvH4_4g04821' => 'fve', 'FvH4_4g31480' => 'fve', 'FvH4_7g01740' => 'fve', 'Glyma.05G130400' => 'gma', 'Glyma.05G156400' => 'gma', 'Glyma.07G197000' => 'gma', 'Glyma.08G085151' => 'gma', 'Glyma.08G114500' => 'gma', 'Glyma.08G300400' => 'gma', 'Glyma.10G215800' => 'gma', 'Glyma.12G224400' => 'gma', 'Glyma.13G179300' => 'gma', 'Glyma.13G218151' => 'gma', 'Glyma.13G238800' => 'gma', 'Glyma.13G276900' => 'gma', 'Glyma.14G078200' => 'gma', 'Glyma.15G074500' => 'gma', 'Glyma.15G094100' => 'gma', 'Glyma.17G247200' => 'gma', 'Glyma.18G120100' => 'gma', 'Glyma.20G176000' => 'gma', 'Gohir.A01G063600' => 'ghi', 'Gohir.A01G170301' => 'ghi', 'Gohir.A02G060500' => 'ghi', 'Gohir.A05G133850' => 'ghi', 'Gohir.A05G161400' => 'ghi', 'Gohir.A06G012900' => 'ghi', 'Gohir.A06G035901' => 'ghi', 'Gohir.A06G127100' => 'ghi', 'Gohir.A06G210500' => 'ghi', 'Gohir.A08G008650' => 'ghi', 'Gohir.A09G072700' => 'ghi', 'Gohir.A09G088301' => 'ghi', 'Gohir.A10G040600' => 'ghi', 'Gohir.A12G036300' => 'ghi', 'Gohir.A12G143350' => 'ghi', 'Gohir.A12G165500' => 'ghi', 'Gohir.A13G145700' => 'ghi', 'Gohir.D01G050000' => 'ghi', 'Gohir.D01G051366' => 'ghi', 'Gohir.D01G161350' => 'ghi', 'Gohir.D02G065900' => 'ghi', 'Gohir.D05G164200' => 'ghi', 'Gohir.D05G355500' => 'ghi', 'Gohir.D06G010400' => 'ghi', 'Gohir.D06G111250' => 'ghi', 'Gohir.D06G132000' => 'ghi', 'Gohir.D06G210500' => 'ghi', 'Gohir.D07G165675' => 'ghi', 'Gohir.D08G062240' => 'ghi', 'Gohir.D08G086101' => 'ghi', 'Gohir.D08G138060' => 'ghi', 'Gohir.D09G072300' => 'ghi', 'Gohir.D10G041400' => 'ghi', 'Gohir.D11G191020' => 'ghi', 'Gohir.D11G212066' => 'ghi', 'Gohir.D12G036300' => 'ghi', 'Gohir.D12G168600' => 'ghi', 'Gohir.D13G150600' => 'ghi', 'Gorai.001G057300' => 'gra', 'Gorai.002G069900' => 'gra', 'Gorai.002G200000' => 'gra', 'Gorai.003G067600' => 'gra', 'Gorai.005G074800' => 'gra', 'Gorai.006G087300' => 'gra', 'Gorai.008G037500' => 'gra', 'Gorai.008G181400' => 'gra', 'Gorai.009G169400' => 'gra', 'Gorai.009G387900' => 'gra', 'Gorai.010G013300' => 'gra', 'Gorai.010G153800' => 'gra', 'Gorai.010G255800' => 'gra', 'Gorai.011G043700' => 'gra', 'Gorai.011G198900' => 'gra', 'Gorai.013G168400' => 'gra', 'GSVIVG01005212001' => 'vvi', 'GSVIVG01006163001' => 'vvi', 'GSVIVG01009625001' => 'vvi', 'GSVIVG01014338001' => 'vvi', 'GSVIVG01020005001' => 'vvi', 'GSVIVG01021450001' => 'vvi', 'GSVIVG01023975001' => 'vvi', 'GSVIVG01034490001' => 'vvi', 'HanXRQChr04g0112071' => 'han', 'HanXRQChr05g0131151' => 'han', 'HanXRQChr09g0262371' => 'han', 'HanXRQChr09g0268401' => 'han', 'HanXRQChr10g0279241' => 'han', 'HanXRQChr10g0297961' => 'han', 'HanXRQChr11g0326231' => 'han', 'HanXRQChr11g0328471' => 'han', 'HanXRQChr16g0507941' => 'han', 'HanXRQChr17g0560211' => 'han', 'Haze_02108' => 'cav', 'Haze_02428' => 'cav', 'Haze_05593' => 'cav', 'Haze_06448' => 'cav', 'Haze_09427' => 'cav', 'Haze_12022' => 'cav', 'Haze_17612' => 'cav', 'Haze_17928' => 'cav', 'Hma1.2p1_0032F.1_g019250' => 'hma', 'Hma1.2p1_0163F.1_g072690' => 'hma', 'Hma1.2p1_0265F.1_g106710' => 'hma', 'Hma1.2p1_0286F.1_g113970' => 'hma', 'Hma1.2p1_0363F.1_g136640' => 'hma', 'Hma1.2p1_0584F.1_g183470' => 'hma', 'Hma1.2p1_0885F.1_g232570' => 'hma', 'HPP92_006022' => 'vpl', 'HPP92_007320' => 'vpl', 'HPP92_011521' => 'vpl', 'HPP92_019387' => 'vpl', 'HPP92_024038' => 'vpl', 'Hund05891' => 'sun', 'Hund06450' => 'sun', 'Hund12053' => 'sun', 'Hund16800' => 'sun', 'Hund21222' => 'sun', 'Hund22896' => 'sun', 'Hund23746' => 'sun', 'Hund27083' => 'sun', 'Lalb_Chr02g0141831' => 'lal', 'Lalb_Chr02g0141841' => 'lal', 'Lalb_Chr05g0220411' => 'lal', 'Lalb_Chr06g0162081' => 'lal', 'Lalb_Chr09g0327651' => 'lal', 'Lalb_Chr13g0295051' => 'lal', 'Lalb_Chr15g0086801' => 'lal', 'Lalb_Chr16g0383781' => 'lal', 'Lalb_Chr16g0383791' => 'lal', 'Lalb_Chr18g0055441' => 'lal', 'Lalb_Chr18g0059611' => 'lal', 'Lalb_Chr20g0109661' => 'lal', 'Lalb_Chr20g0109831' => 'lal', 'Lalb_Chr20g0121871' => 'lal', 'Lalb_Chr22g0355361' => 'lal', 'Lalb_Chr25g0286371' => 'lal', 'Lj1A1187G43' => 'lonja', 'Lj1A1205T50' => 'lonja', 'Lj1A800G33' => 'lonja', 'Lj1C1187T7' => 'lonja', 'Lj1C843T11' => 'lonja', 'Lj1g0010940' => 'lja', 'Lj2A288T69' => 'lonja', 'Lj3g0024276' => 'lja', 'Lj4A47T76' => 'lonja', 'Lj4g0005805' => 'lja', 'Lj4g0006097' => 'lja', 'Lj4g0008528' => 'lja', 'Lj4g0024907' => 'lja', 'Lj5g0012472' => 'lja', 'Lj5g0018648' => 'lja', 'Lj6C789G1' => 'lonja', 'Lj6g0004000' => 'lja', 'Lj7A292G67' => 'lonja', 'Lj7A292T64' => 'lonja', 'Lj9A400T58' => 'lonja', 'Lsat_1_v5_gn_1_126181' => 'lsa', 'Lsat_1_v5_gn_4_123041' => 'lsa', 'Lsat_1_v5_gn_4_133620' => 'lsa', 'Lsat_1_v5_gn_4_53221' => 'lsa', 'Lsat_1_v5_gn_4_71961' => 'lsa', 'Lsat_1_v5_gn_7_105241' => 'lsa', 'Lsat_1_v5_gn_7_21361' => 'lsa', 'Lsat_1_v5_gn_7_28860' => 'lsa', 'Lsat_1_v5_gn_7_31260' => 'lsa', 'Lsat_1_v5_gn_8_52801' => 'lsa', 'Manes.02G191400' => 'mes', 'Manes.03G110100' => 'mes', 'Manes.04G071100' => 'mes', 'Manes.05G100500' => 'mes', 'Manes.05G164700' => 'mes', 'Manes.15G087000' => 'mes', 'Manes.15G121500' => 'mes', 'Manes.16G028300' => 'mes', 'Manes.17G046100' => 'mes', 'Manes.17G069800' => 'mes', 'Manes.18G100500' => 'mes', 'Mapoly0002s0109' => 'mpo', 'Mapoly0024s0007' => 'mpo', 'Mapoly0089s0032' => 'mpo', 'MBI04_g42241_MAGBIO' => 'mbi', 'MBI05_g11988_MAGBIO' => 'mbi', 'MBI05_g35452_MAGBIO' => 'mbi', 'MBI07_g30179_MAGBIO' => 'mbi', 'MBI07_g35859_MAGBIO' => 'mbi', 'MBI07_g35860_MAGBIO' => 'mbi', 'MBI07_g37166_MAGBIO' => 'mbi', 'MBI08_g18172_MAGBIO' => 'mbi', 'MBI09_g08441_MAGBIO' => 'mbi', 'MBI13_g01676_MAGBIO' => 'mbi', 'MBI14_g42955_MAGBIO' => 'mbi', 'MBI16_g13161_MAGBIO' => 'mbi', 'MBI17_g27204_MAGBIO' => 'mbi', 'MBI19_g21595_MAGBIO' => 'mbi', 'MD00G1148400' => 'mdo', 'MD02G1301200' => 'mdo', 'MD03G1227800' => 'mdo', 'MD05G1041100' => 'mdo', 'MD05G1124800' => 'mdo', 'MD05G1284000' => 'mdo', 'MD05G1338800' => 'mdo', 'MD05G1338900' => 'mdo', 'MD07G1022800' => 'mdo', 'MD10G1047500' => 'mdo', 'MD10G1127500' => 'mdo', 'MD10G1262300' => 'mdo', 'MD10G1293800' => 'mdo', 'MD16G1074300' => 'mdo', 'Medtr1g021670' => 'mtr', 'Medtr1g096320' => 'mtr', 'Medtr2g013690' => 'mtr', 'Medtr2g019450' => 'mtr', 'Medtr2g085170' => 'mtr', 'Medtr4g088785' => 'mtr', 'Medtr8g055930' => 'mtr', 'Medtr8g085850' => 'mtr', 'MELO3C002605.2' => 'cme', 'MELO3C003891.2' => 'cme', 'MELO3C004012.2' => 'cme', 'MELO3C007134.2' => 'cme', 'MELO3C008118.2' => 'cme', 'MELO3C016700.2' => 'cme', 'MELO3C024127.2' => 'cme', 'MELO3C033361.2' => 'cme', 'MELO3C033362.2' => 'cme', 'Migut.C00430' => 'egut', 'Migut.C01246' => 'egut', 'Migut.E00101' => 'egut', 'Migut.H01486' => 'egut', 'Migut.H01939' => 'egut', 'Migut.K00360' => 'egut', 'Migut.M00910' => 'egut', 'Migut.M01139' => 'egut', 'Migut.N02677' => 'egut', 'MSTRG.13252' => 'ama', 'MSTRG.14701' => 'ama', 'MSTRG.1521' => 'ama', 'MSTRG.15884' => 'ama', 'MSTRG.16242' => 'ama', 'MSTRG.22285' => 'ama', 'MSTRG.22444' => 'ama', 'MSTRG.2349' => 'ama', 'MSTRG.26308' => 'ama', 'MSTRG.28296' => 'ama', 'MSTRG.9895' => 'ama', 'Nitab4.5_0000110g0060' => 'nta', 'Nitab4.5_0000420g0130' => 'nta', 'Nitab4.5_0000422g0030' => 'nta', 'Nitab4.5_0000560g0180' => 'nta', 'Nitab4.5_0000703g0100' => 'nta', 'Nitab4.5_0000786g0200' => 'nta', 'Nitab4.5_0001336g0020' => 'nta', 'Nitab4.5_0001796g0030' => 'nta', 'Nitab4.5_0003348g0060' => 'nta', 'Nitab4.5_0003698g0040' => 'nta', 'Nitab4.5_0003942g0090' => 'nta', 'Nitab4.5_0004775g0070' => 'nta', 'Nitab4.5_0004864g0030' => 'nta', 'Nitab4.5_0005615g0020' => 'nta', 'Nitab4.5_0009288g0030' => 'nta', 'Nitab4.5_0009341g0010' => 'nta', 'Nitab4.5_0009535g0010' => 'nta', 'Nn1g03995' => 'nnu', 'Nn1g04100' => 'nnu', 'Nn1g06530' => 'nnu', 'Nn3g16404' => 'nnu', 'Nn3g17212' => 'nnu', 'Nn3g20776' => 'nnu', 'Nn3g21923' => 'nnu', 'Nn5g27737' => 'nnu', 'Nn5g29461' => 'nnu', 'Nn7g38355' => 'nnu', 'Nn8g39873' => 'nnu', 'Oeu000548.2' => 'oeu', 'Oeu004672.1' => 'oeu', 'Oeu015605.2' => 'oeu', 'Oeu016092.1' => 'oeu', 'Oeu017879.3' => 'oeu', 'Oeu024910.1' => 'oeu', 'Oeu028965.1' => 'oeu', 'Oeu031269.1' => 'oeu', 'Oeu031270.1' => 'oeu', 'Oeu032535.1' => 'oeu', 'Oeu034151.1' => 'oeu', 'Oeu034152.1' => 'oeu', 'Oeu034588.2' => 'oeu', 'Oeu050846.1' => 'oeu', 'Oeu050849.2' => 'oeu', 'Oeu051063.2' => 'oeu', 'Oeu052368.1' => 'oeu', 'Oeu052370.1' => 'oeu', 'Os01g0210400' => 'osa', 'Os01g0304300' => 'osa', 'Os01g0749100' => 'osa', 'Os02g0745800' => 'osa', 'Os03g0769050' => 'osa', 'Os05g0531500' => 'osa', 'Os06g0724300' => 'osa', 'Os11g0198100' => 'osa', 'Peaxi162Scf00069g01425' => 'pax', 'Peaxi162Scf00280g00811' => 'pax', 'Peaxi162Scf00310g00615' => 'pax', 'Peaxi162Scf00362g00542' => 'pax', 'Peaxi162Scf00461g00310' => 'pax', 'Peaxi162Scf00530g00118' => 'pax', 'Peaxi162Scf00541g00057' => 'pax', 'Peaxi162Scf00661g00017' => 'pax', 'Peaxi162Scf00926g00027' => 'pax', 'Peaxi162Scf01064g00263' => 'pax', 'Peaxi162Scf01211g00135' => 'pax', 'PGR004G2336' => 'pgr', 'PGR042G0327' => 'pgr', 'PGR042G1957' => 'pgr', 'PGR042G2003' => 'pgr', 'PGR042G3929' => 'pgr', 'PGR083G1137' => 'pgr', 'PGR083G1364' => 'pgr', 'PGSC0003DMG400003381' => 'stu', 'PGSC0003DMG400003417' => 'stu', 'PGSC0003DMG400008981' => 'stu', 'PGSC0003DMG400012417' => 'stu', 'PGSC0003DMG400012823' => 'stu', 'PGSC0003DMG400016885' => 'stu', 'PGSC0003DMG400022812' => 'stu', 'PGSC0003DMG400029726' => 'stu', 'PGSC0003DMG401009243' => 'stu', 'PGSC0003DMG401031505' => 'stu', 'PGSC0003DMG402031505' => 'stu', 'Phvul.001G017600' => 'pvu', 'Phvul.002G193500' => 'pvu', 'Phvul.002G228900' => 'pvu', 'Phvul.002G236800' => 'pvu', 'Phvul.003G049500' => 'pvu', 'Phvul.005G072000' => 'pvu', 'Phvul.006G164800' => 'pvu', 'Phvul.006G185100' => 'pvu', 'Phvul.007G090000' => 'pvu', 'Potri.001G399800' => 'ptr', 'Potri.002G149900' => 'ptr', 'Potri.004G044100' => 'ptr', 'Potri.004G177600' => 'ptr', 'Potri.009G138000' => 'ptr', 'Potri.010G094000' => 'ptr', 'Potri.011G053000' => 'ptr', 'Potri.011G119300' => 'ptr', 'Potri.013G113700' => 'ptr', 'Potri.018G107800' => 'ptr', 'Potri.019G084100' => 'ptr', 'Pp3c14_23720' => 'ppa', 'Pp3c16_6340' => 'ppa', 'Pp3c23_13420' => 'ppa', 'Pp3c24_2740' => 'ppa', 'Pp3c25_860' => 'ppa', 'Pp3c8_21750' => 'ppa', 'Prupe.1G273000' => 'ppe', 'Prupe.1G273700' => 'ppe', 'Prupe.1G274100' => 'ppe', 'Prupe.2G023300' => 'ppe', 'Prupe.4G048000' => 'ppe', 'Prupe.4G080400' => 'ppe', 'Prupe.4G181200' => 'ppe', 'Prupe.8G056900' => 'ppe', 'Prupe.8G168700' => 'ppe', 'Psat1g189080' => 'psa', 'Psat1g204760' => 'psa', 'Psat4g175560' => 'psa', 'Psat4g177720' => 'psa', 'Psat5g244240' => 'psa', 'Psat6g010720' => 'psa', 'Psat6g187200' => 'psa', 'Psat7g072040' => 'psa', 'PSO017G3501' => 'pso', 'PSO063G2148' => 'pso', 'PSO063G5608' => 'pso', 'PSO210G6392' => 'pso', 'PSO541G2319' => 'pso', 'PSO541G2836' => 'pso', 'PSO541G4012' => 'pso', 'PSO541G6253' => 'pso', 'PSO675G0580' => 'pso', 'PSO675G0856' => 'pso', 'PSO675G5635' => 'pso', 'PSO675G9157' => 'pso', 'PSO832G1660' => 'pso', 'PSO832G1969' => 'pso', 'QL02p007186' => 'qlo', 'QL02p033904' => 'qlo', 'QL03p064391' => 'qlo', 'QL05p040593' => 'qlo', 'QL05p058242' => 'qlo', 'QL08p021825' => 'qlo', 'QL11p004981' => 'qlo', 'RcHm_v2.0_Chr1g0318301' => 'rch', 'RcHm_v2.0_Chr4g0418501' => 'rch', 'RcHm_v2.0_Chr4g0439971' => 'rch', 'RcHm_v2.0_Chr5g0008541' => 'rch', 'RcHm_v2.0_Chr5g0014101' => 'rch', 'RcHm_v2.0_Chr5g0014131' => 'rch', 'RcHm_v2.0_Chr5g0033621' => 'rch', 'RcHm_v2.0_Chr6g0272041' => 'rch', 'RcHm_v2.0_Chr6g0278831' => 'rch', 'Rhsim02G0130400' => 'rsi', 'Rhsim02G0171100' => 'rsi', 'Rhsim05G0053000' => 'rsi', 'Rhsim05G0053100' => 'rsi', 'Rhsim06G0096500' => 'rsi', 'Rhsim06G0096600' => 'rsi', 'Rhsim06G0199100' => 'rsi', 'Rhsim12G0062300' => 'rsi', 'Rhsim12G0062800' => 'rsi', 'Sabra02G0118600' => 'sbr', 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'Solyc03g079860.2' => 'sly', 'Solyc04g079770.3' => 'sly', 'Solyc05g007430.4' => 'sly', 'Solyc07g063150.3' => 'sly', 'Solyc08g016620.3' => 'sly', 'Solyc09g057590.3' => 'sly', 'Solyc09g057600.1' => 'sly', 'Solyc10g009050.3' => 'sly', 'Solyc11g017420.2' => 'sly', 'Sopen01g053810' => 'spe', 'Sopen02g023040' => 'spe', 'Sopen03g002440' => 'spe', 'Sopen04g033350' => 'spe', 'Sopen05g003310' => 'spe', 'Sopen07g004050' => 'spe', 'Sopen07g031340' => 'spe', 'Sopen08g006990' => 'spe', 'Sopen10g004830' => 'spe', 'Sopen11g009370' => 'spe', 'Sp1g24450' => 'spa', 'Sp1g29670' => 'spa', 'Sp1g39600' => 'spa', 'Sp2g11080' => 'spa', 'Sp2g13970' => 'spa', 'Sp4g16130' => 'spa', 'Sp6g13080' => 'spa', 'Sp7g37270' => 'spa', 'TAR371G0065' => 'tar', 'TAR376G0340' => 'tar', 'TAR376G0435' => 'tar', 'TAR381G0002' => 'tar', 'TAR381G1236' => 'tar', 'TAR624G0055' => 'tar', 'TAR624G0324' => 'tar', 'TAR624G0696' => 'tar', 'TAR624G0906' => 'tar', 'TAR625G0107' => 'tar', 'TAR626G0015' => 'tar', 'TAR626G1356' => 'tar', 'TAR627G0888' => 'tar', 'TAR628G0399' => 'tar', 'TAR628G1327' => 'tar', 'TAR629G2831' => 'tar', 'TAR629G2874' => 'tar', 'TAR633G1432' => 'tar', 'TAR633G2771' => 'tar', 'THA.LOC104803394' => 'tha', 'THA.LOC104805153' => 'tha', 'THA.LOC104806784' => 'tha', 'THA.LOC104810473' => 'tha', 'THA.LOC104813100' => 'tha', 'THA.LOC104814215' => 'tha', 'THA.LOC104815554' => 'tha', 'THA.LOC104820544' => 'tha', 'THA.LOC104824754' => 'tha', 'THA.LOC104827717' => 'tha', 'Thecc.02G031400' => 'tca', 'Thecc.02G055900' => 'tca', 'Thecc.02G350800' => 'tca', 'Thecc.06G150900' => 'tca', 'Thecc.06G186600' => 'tca', 'Thecc.07G089600' => 'tca', 'Thecc.08G020400' => 'tca', 'Thecc.08G182100' => 'tca', 'Thhalv10000873m.g' => 'esa', 'Thhalv10004185m.g' => 'esa', 'Thhalv10006981m.g' => 'esa', 'Thhalv10007204m.g' => 'esa', 'Thhalv10011374m.g' => 'esa', 'Thhalv10013482m.g' => 'esa', 'Thhalv10017801m.g' => 'esa', 'Thhalv10024983m.g' => 'esa', 'TPR.G12072' => 'tpr', 'TPR.G15769' => 'tpr', 'TPR.G16504' => 'tpr', 'TPR.G16506' => 'tpr', 'TPR.G24345' => 'tpr', 'TPR.G26666' => 'tpr', 'TPR.G27320' => 'tpr', 'TPR.G31819' => 'tpr', 'TPR.G38879' => 'tpr', 'TPR.G39015' => 'tpr', 'TPR.G8819' => 'tpr', 'TWI09G0924' => 'twi', 'TWI12G0811' => 'twi', 'TWI12G1294' => 'twi', 'TWI31G0150' => 'twi', 'TWI36G1262' => 'twi', 'TWI38G1287' => 'twi', 'TWI38G1633' => 'twi', 'TWI38G1982' => 'twi', 'TWI39G0116' => 'twi', 'TWI60G1011' => 'twi', 'TWI63G0171' => 'twi', 'TWI73G0839' => 'twi', 'TWI79G1511' => 'twi', 'unitig_0.g915' => 'ugi', 'unitig_0.g916' => 'ugi', 'unitig_21.g20219' => 'ugi', 'unitig_21.g20416' => 'ugi', 'unitig_578.g16132' => 'ugi', 'unitig_578.g16718' => 'ugi', 'unitig_62.g23481' => 'ugi', 'unitig_744.g24535' => 'ugi', 'unitig_749.g13525' => 'ugi', 'vmacro01248' => 'vma', 'vmacro02290' => 'vma', 'vmacro10946' => 'vma', 'vmacro11865' => 'vma', 'vmacro12493' => 'vma', 'vmacro17322' => 'vma', 'vmacro21599' => 'vma', 'vmacro23041' => 'vma', 'VMungo0251G0004' => 'vmu', 'VMungo0251G2639' => 'vmu', 'VMungo0251G2967' => 'vmu', 'VMungo0540G0864' => 'vmu', 'VMungo0540G1569' => 'vmu', 'VMungo0647G0317' => 'vmu', 'VMungo0720G1373' => 'vmu', 'VMungo0720G1508' => 'vmu', 'VMungo1080G0485' => 'vmu', 'VMungo1215G3177' => 'vmu', 'Zm00001eb112600' => 'zma', 'Zm00001eb120220' => 'zma', 'Zm00001eb153240' => 'zma', 'Zm00001eb168880' => 'zma', 'Zm00001eb213920' => 'zma', 'Zm00001eb228280' => 'zma', 'Zm00001eb254580' => 'zma', 'Zm00001eb272180' => 'zma', 'Zm00001eb293190' => 'zma', 'Zm00001eb322930' => 'zma', 'Zm00001eb353360' => 'zma', 'Zm00001eb353390' => 'zma', 'Zm00001eb353430' => 'zma', 'Zm00001eb353440' => 'zma', 'Zm00001eb353780' => 'zma' ), 'gf_id' => 'HOM05D000499', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000499' ), 'data_identifier' => 'HOM05D000499', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000499', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1066', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p29780' => 'bna', 'A02p33180' => 'bna', 'A03p16470' => 'bna', 'A03p66010' => 'bna', 'A04p25970' => 'bna', 'A06p01270' => 'bna', 'A06p46080' => 'bna', 'A07p11400' => 'bna', 'A08p01840' => 'bna', 'A08p08230' => 'bna', 'A08p25740' => 'bna', 'A09p32070' => 'bna', 'A09p37830' => 'bna', 'A09p42840' => 'bna', 'A09p42850' => 'bna', 'Aa31LG10G2060' => 'aar', 'Aa31LG2G7410' => 'aar', 'Aa31LG6G10200' => 'aar', 'Aa31LG6G16680' => 'aar', 'Aa31LG6G8470' => 'aar', 'Aa31LG9G12730' => 'aar', 'Aa31LG9G13680' => 'aar', 'Aa31LG9G14920' => 'aar', 'Aa31LG9G6650' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4977' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5467' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3254' => 'aag', 'Actinidia02578' => 'ach', 'Actinidia07693' => 'ach', 'Actinidia08413' => 'ach', 'Actinidia08414' => 'ach', 'Actinidia15289' => 'ach', 'Actinidia19871' => 'ach', 'Actinidia21475' => 'ach', 'Actinidia22576' => 'ach', 'Actinidia28327' => 'ach', 'Actinidia32491' => 'ach', 'Actinidia39463' => 'ach', 'Actinidia39571' => 'ach', 'Ah.01g013750' => 'amhyb', 'Ah.01g023210' => 'amhyb', 'Ah.04g164850' => 'amhyb', 'Ah.05g178060' => 'amhyb', 'Ah.07g204270' => 'amhyb', 'Ah.07g208480' => 'amhyb', 'Ah.09g237410' => 'amhyb', 'Ah.14g089460' => 'amhyb', 'AL1G41790' => 'aly', 'AL1G49050' => 'aly', 'AL1G53810' => 'aly', 'AL1G61400' => 'aly', 'AL4G18580' => 'aly', 'AL5G12510' => 'aly', 'AL5G12540' => 'aly', 'AL6G43230' => 'aly', 'AL7G10370' => 'aly', 'AL7G19250' => 'aly', 'AL8G12240' => 'aly', 'AL8G18540' => 'aly', 'Aqoxy1G02409' => 'aox', 'Aqoxy2G03993' => 'aox', 'Aqoxy3G03357' => 'aox', 'Aqoxy4G00785' => 'aox', 'Aqoxy5G02598' => 'aox', 'Aqoxy6G00132' => 'aox', 'Aqoxy7G01776' => 'aox', 'Aqoxy7G02316' => 'aox', 'Aqoxy7G03973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.12AFKW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B8730' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27IQR1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3F75VG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3RE0GA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41TCQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.527VTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FIR39' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5W8UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DA38EV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ63HS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H1I32C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HC27T5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4M8AP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7N3CZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9UVDZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LS1NQA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT1D4B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SKC4TM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCFV76' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF9Q1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQWD9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1ZM88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WE07RT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YCK7VH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJE6Q6' => 'arhy', 'AT1G28240' => 'ath', 'AT1G34550' => 'ath', 'AT1G53040' => 'ath', 'AT2G02910' => 'ath', 'AT4G09630' => 'ath', 'AT4G38500' => 'ath', 'AT5G42660' => 'ath', 'AT5G46220' => 'ath', 'ATR0152G026' => 'atr', 'ATR0564G343' => 'atr', 'ATR0706G151' => 'atr', 'ATR0733G207' => 'atr', 'ATR0751G234' => 'atr', 'ATR0807G048' => 'atr', 'ATR1091G084' => 'atr', 'Atru.chr10.1229' => 'acertr', 'Atru.chr10.1230' => 'acertr', 'Atru.chr10.1874' => 'acertr', 'Atru.chr11.1808' => 'acertr', 'Atru.chr13.1795' => 'acertr', 'Atru.chr13.570' => 'acertr', 'Atru.chr2.2608' => 'acertr', 'Atru.chr2.2609' => 'acertr', 'Atru.chr5.3428' => 'acertr', 'Atru.chr8.1171' => 'acertr', 'AUR62004651' => 'cqu', 'AUR62008675' => 'cqu', 'AUR62010014' => 'cqu', 'AUR62013004' => 'cqu', 'AUR62014825' => 'cqu', 'AUR62015015' => 'cqu', 'AUR62015151' => 'cqu', 'AUR62017020' => 'cqu', 'AUR62019422' => 'cqu', 'AUR62023570' => 'cqu', 'AUR62025571' => 'cqu', 'AUR62029098' => 'cqu', 'AUR62033863' => 'cqu', 'AUR62034296' => 'cqu', 'AUR62040075' => 'cqu', 'BcaB02g07334' => 'bca', 'BcaB02g10575' => 'bca', 'BcaB03g12119' => 'bca', 'BcaB03g12120' => 'bca', 'BcaB03g13945' => 'bca', 'BcaB04g17123' => 'bca', 'BcaB04g17867' => 'bca', 'BcaB04g19839' => 'bca', 'BcaB07g30317' => 'bca', 'BcaB07g32432' => 'bca', 'BcaB07g33362' => 'bca', 'BcaB08g36611' => 'bca', 'BcaC01g00028' => 'bca', 'BcaC01g01356' => 'bca', 'BcaC01g02034' => 'bca', 'BcaC01g06051' => 'bca', 'BcaC03g16839' => 'bca', 'BcaC03g17176' => 'bca', 'BcaC05g26829' => 'bca', 'BcaC06g31490' => 'bca', 'BcaC06g35344' => 'bca', 'BcaC06g36570' => 'bca', 'BcaC07g37537' => 'bca', 'BcaC08g43491' => 'bca', 'BcaC08g43773' => 'bca', 'BcaNung00234' => 'bca', 'BcaNung01982' => 'bca', 'BcaNung03707' => 'bca', 'BcaNung06454' => 'bca', 'BolC2t10762H' => 'bol', 'BolC2t11191H' => 'bol', 'BolC3t14322H' => 'bol', 'BolC3t19747H' => 'bol', 'BolC3t21425H' => 'bol', 'BolC4t27800H' => 'bol', 'BolC5t31423H' => 'bol', 'BolC6t35951H' => 'bol', 'BolC6t36282H' => 'bol', 'BolC7t40678H' => 'bol', 'BolC7t40679H' => 'bol', 'BolC7t42222H' => 'bol', 'BolC7t43492H' => 'bol', 'BolC7t46785H' => 'bol', 'BolC8t47853H' => 'bol', 'BolC9t56805H' => 'bol', 'BraA02t08000Z' => 'bra', 'BraA02t08341Z' => 'bra', 'BraA03t10936Z' => 'bra', 'BraA03t15657Z' => 'bra', 'BraA04t18100Z' => 'bra', 'BraA05t20523Z' => 'bra', 'BraA06t23353Z' => 'bra', 'BraA06t27473Z' => 'bra', 'BraA06t27769Z' => 'bra', 'BraA07t28928Z' => 'bra', 'BraA08t32236Z' => 'bra', 'BraA08t32841Z' => 'bra', 'BraA08t34524Z' => 'bra', 'BraA09t38742Z' => 'bra', 'BraA09t39295Z' => 'bra', 'C02p47180' => 'bna', 'C02p50990' => 'bna', 'C03p19360' => 'bna', 'C03p74950' => 'bna', 'C03p91000' => 'bna', 'C04p63260' => 'bna', 'C05p27050' => 'bna', 'C06p08750' => 'bna', 'C06p11490' => 'bna', 'C07p02820' => 'bna', 'C07p17180' => 'bna', 'C07p29440' => 'bna', 'C07p63730' => 'bna', 'C09p39260' => 'bna', 'CAN.G1164.34' => 'can', 'CAN.G1164.39' => 'can', 'CAN.G1530.3' => 'can', 'CAN.G162.61' => 'can', 'CAN.G176.6' => 'can', 'CAN.G289.49' => 'can', 'CAN.G370.21' => 'can', 'CAN.G370.22' => 'can', 'CAN.G371.117' => 'can', 'CAN.G58.37' => 'can', 'CAN.G588.98' => 'can', 'CANSAT21G2266' => 'cansat', 'CANSAT25G2799' => 'cansat', 'CANSAT35G0862' => 'cansat', 'CANSAT35G1704' => 'cansat', 'CANSAT35G1760' => 'cansat', 'CANSAT56G3971' => 'cansat', 'CANSAT56G4116' => 'cansat', 'CANSAT80G1259' => 'cansat', 'CARHR027730' => 'chi', 'CARHR033880' => 'chi', 'CARHR043270' => 'chi', 'CARHR145330' => 'chi', 'CARHR145340' => 'chi', 'CARHR175570' => 'chi', 'CARHR181570' => 'chi', 'CARHR258470' => 'chi', 'CARHR260490' => 'chi', 'CARHR294220' => 'chi', 'Carub.0001s2668' => 'cru', 'Carub.0001s3257' => 'cru', 'Carub.0001s4220' => 'cru', 'Carub.0005s0179' => 'cru', 'Carub.0006s2807' => 'cru', 'Carub.0007s0039' => 'cru', 'Carub.0008s0169' => 'cru', 'Carub.0008s0636' => 'cru', 'Ca_00338_v3' => 'car', 'Ca_00542_v3' => 'car', 'Ca_01844_v3' => 'car', 'Ca_10611_v3' => 'car', 'Ca_13326_v3' => 'car', 'Ca_17944_v3' => 'car', 'Ca_18546_v3' => 'car', 'Ca_24219_v3' => 'car', 'Ca_29972_v3' => 'car', 'CBR_g3681' => 'cbr', 'CBR_g40021' => 'cbr', 'Cc01_g08140' => 'ccan', 'Cc02_g13410' => 'ccan', 'Cc02_g37480' => 'ccan', 'Cc05_g12030' => 'ccan', 'Cc09_g03370' => 'ccan', 'Cc09_g10300' => 'ccan', 'Cc10_g03530' => 'ccan', 'Cc10_g11380' => 'ccan', 'CDE01G0176' => 'cde', 'CDE02G0675' => 'cde', 'CDE02G0942' => 'cde', 'CDE02G1153' => 'cde', 'CDE02G4177' => 'cde', 'CDE04G2117' => 'cde', 'CDE04G2736' => 'cde', 'CDE08G1161' => 'cde', 'CDE09G1238' => 'cde', 'Cfa000467' => 'cfa', 'Cfa000947' => 'cfa', 'Cfa004969' => 'cfa', 'Cfa005284' => 'cfa', 'Cfa008993' => 'cfa', 'Cfa018187' => 'cfa', 'Cfa018454' => 'cfa', 'Cfa020585' => 'cfa', 'Ciclev10000424m.g' => 'ccl', 'Ciclev10003605m.g' => 'ccl', 'Ciclev10007828m.g' => 'ccl', 'Ciclev10014620m.g' => 'ccl', 'Ciclev10015169m.g' => 'ccl', 'Ciclev10018291m.g' => 'ccl', 'Ciclev10028256m.g' => 'ccl', 'Ciclev10033822m.g' => 'ccl', 'CiPaw.05G060300' => 'cil', 'CiPaw.05G085000' => 'cil', 'CiPaw.06G083700' => 'cil', 'CiPaw.06G120300' => 'cil', 'CiPaw.09G060500' => 'cil', 'CiPaw.09G123800' => 'cil', 'CiPaw.11G169700' => 'cil', 'CiPaw.12G118300' => 'cil', 'CiPaw.15G071000' => 'cil', 'CiPaw.15G081900' => 'cil', 'ClCG01G024610' => 'cla', 'ClCG03G006070' => 'cla', 'ClCG05G019250' => 'cla', 'ClCG09G009500' => 'cla', 'ClCG11G008200' => 'cla', 'ClCG11G018080' => 'cla', 'COL.COLO4_17373' => 'col', 'COL.COLO4_22994' => 'col', 'COL.COLO4_26389' => 'col', 'COL.COLO4_27170' => 'col', 'COL.COLO4_31074' => 'col', 'COL.COLO4_31465' => 'col', 'COL.COLO4_36438' => 'col', 'COL.COLO4_36439' => 'col', 'Cpa.g.c38781' => 'cpa', 'Cpa.g.sc128.12' => 'cpa', 'Cpa.g.sc166.7' => 'cpa', 'Cpa.g.sc166.8' => 'cpa', 'Cpa.g.sc20.111' => 'cpa', 'Cpa.g.sc27.31' => 'cpa', 'Cpa.g.sc64.36' => 'cpa', 'Cpa.g.sc64.37' => 'cpa', 'Cpa.g.sc66.49' => 'cpa', 'Cpa.g.sc80.64' => 'cpa', 'CsaV3_1G012320' => 'csa', 'CsaV3_2G008480' => 'csa', 'CsaV3_2G033450' => 'csa', 'CsaV3_3G044830' => 'csa', 'CsaV3_4G033710' => 'csa', 'CsaV3_6G051730' => 'csa', 'CsaV3_7G025350' => 'csa', 'CSS0001067' => 'camsi', 'CSS0005996' => 'camsi', 'CSS0006590' => 'camsi', 'CSS0009673' => 'camsi', 'CSS0010201' => 'camsi', 'CSS0010549' => 'camsi', 'CSS0011364' => 'camsi', 'CSS0014473' => 'camsi', 'CSS0014961' => 'camsi', 'CSS0020191' => 'camsi', 'CSS0021165' => 'camsi', 'CSS0022306' => 'camsi', 'CSS0030591' => 'camsi', 'CSS0030696' => 'camsi', 'CSS0032653' => 'camsi', 'CSS0037487' => 'camsi', 'CSS0041102' => 'camsi', 'CSS0041261' => 'camsi', 'CSS0046246' => 'camsi', 'CSS0049256' => 'camsi', 'DCAR_004075' => 'dca', 'DCAR_011538' => 'dca', 'DCAR_019553' => 'dca', 'DCAR_020952' => 'dca', 'DCAR_021739' => 'dca', 'DCAR_027407' => 'dca', 'DCAR_027913' => 'dca', 'DCAR_028066' => 'dca', 'Dinv05899' => 'din', 'Dinv07563' => 'din', 'Dinv08010' => 'din', 'Dinv14125' => 'din', 'Dinv20172' => 'din', 'Dinv30743' => 'din', 'Dinv31229' => 'din', 'Dinv34162' => 'din', 'Dinv36028' => 'din', 'Dinv39368' => 'din', 'Dinv40565' => 'din', 'Dinv41706' => 'din', 'Duzib052G0089' => 'dzi', 'Duzib116G0641' => 'dzi', 'Duzib132G0069' => 'dzi', 'Duzib132G1219' => 'dzi', 'Duzib147G0278' => 'dzi', 'Duzib160G0480' => 'dzi', 'Duzib170G0661' => 'dzi', 'Duzib177G0591' => 'dzi', 'Duzib187G1353' => 'dzi', 'Duzib192G0858' => 'dzi', 'Duzib192G0883' => 'dzi', 'Duzib213G0506' => 'dzi', 'Duzib235G0289' => 'dzi', 'Duzib251G0422' => 'dzi', 'ECA232G3898' => 'eca', 'ECA233G5950' => 'eca', 'ECA234G1699' => 'eca', 'ECA234G2421' => 'eca', 'ECA236G0426' => 'eca', 'ECA236G4331' => 'eca', 'ECA248G2573' => 'eca', 'EL10Ac1g00077' => 'bvu', 'EL10Ac1g01746' => 'bvu', 'EL10Ac2g03464' => 'bvu', 'EL10Ac4g08176' => 'bvu', 'EL10Ac7g17521' => 'bvu', 'EL10Ac8g20386' => 'bvu', 'EL10Ac9g21343' => 'bvu', 'EL10Ac9g22688' => 'bvu', 'Eucgr.B03434' => 'egr', 'Eucgr.D00618' => 'egr', 'Eucgr.E02395' => 'egr', 'Eucgr.F01129' => 'egr', 'Eucgr.F02622' => 'egr', 'Eucgr.F04207' => 'egr', 'FAN01G0570' => 'fan', 'FAN03G3351' => 'fan', 'FAN06G3702' => 'fan', 'FAN07G2149' => 'fan', 'FAN10G3758' => 'fan', 'FAN11G1170' => 'fan', 'FAN11G2050' => 'fan', 'FAN11G2724' => 'fan', 'FAN12G1700' => 'fan', 'FAN12G2028' => 'fan', 'FAN15G1160' => 'fan', 'FAN15G3063' => 'fan', 'FAN16G2540' => 'fan', 'FAN16G3077' => 'fan', 'FAN16G3624' => 'fan', 'FAN17G0221' => 'fan', 'FAN20G2492' => 'fan', 'FAN20G2905' => 'fan', 'FAN21G0548' => 'fan', 'FAN21G1300' => 'fan', 'FAN22G0077' => 'fan', 'FAN22G1315' => 'fan', 'FAN24G1280' => 'fan', 'FAN24G1445' => 'fan', 'FAN24G3527' => 'fan', 'FAN25G0464' => 'fan', 'FAN25G2885' => 'fan', 'FAN25G3270' => 'fan', 'FAN27G1101' => 'fan', 'FAN27G2846' => 'fan', 'FAN27G3524' => 'fan', 'FvH4_2g11770' => 'fve', 'FvH4_2g15630' => 'fve', 'FvH4_3g05570' => 'fve', 'FvH4_3g09110' => 'fve', 'FvH4_3g19940' => 'fve', 'FvH4_4g04821' => 'fve', 'FvH4_4g31480' => 'fve', 'FvH4_7g01740' => 'fve', 'Glyma.05G130400' => 'gma', 'Glyma.05G156400' => 'gma', 'Glyma.07G197000' => 'gma', 'Glyma.08G085151' => 'gma', 'Glyma.08G114500' => 'gma', 'Glyma.08G300400' => 'gma', 'Glyma.10G215800' => 'gma', 'Glyma.12G224400' => 'gma', 'Glyma.13G179300' => 'gma', 'Glyma.13G218151' => 'gma', 'Glyma.13G238800' => 'gma', 'Glyma.13G276900' => 'gma', 'Glyma.14G078200' => 'gma', 'Glyma.15G074500' => 'gma', 'Glyma.15G094100' => 'gma', 'Glyma.17G247200' => 'gma', 'Glyma.18G120100' => 'gma', 'Glyma.20G176000' => 'gma', 'Gohir.A01G063600' => 'ghi', 'Gohir.A01G170301' => 'ghi', 'Gohir.A02G060500' => 'ghi', 'Gohir.A05G133850' => 'ghi', 'Gohir.A05G161400' => 'ghi', 'Gohir.A06G012900' => 'ghi', 'Gohir.A06G035901' => 'ghi', 'Gohir.A06G127100' => 'ghi', 'Gohir.A06G210500' => 'ghi', 'Gohir.A08G008650' => 'ghi', 'Gohir.A09G072700' => 'ghi', 'Gohir.A09G088301' => 'ghi', 'Gohir.A10G040600' => 'ghi', 'Gohir.A12G036300' => 'ghi', 'Gohir.A12G143350' => 'ghi', 'Gohir.A12G165500' => 'ghi', 'Gohir.A13G145700' => 'ghi', 'Gohir.D01G050000' => 'ghi', 'Gohir.D01G051366' => 'ghi', 'Gohir.D01G161350' => 'ghi', 'Gohir.D02G065900' => 'ghi', 'Gohir.D05G164200' => 'ghi', 'Gohir.D05G355500' => 'ghi', 'Gohir.D06G010400' => 'ghi', 'Gohir.D06G111250' => 'ghi', 'Gohir.D06G132000' => 'ghi', 'Gohir.D06G210500' => 'ghi', 'Gohir.D07G165675' => 'ghi', 'Gohir.D08G062240' => 'ghi', 'Gohir.D08G086101' => 'ghi', 'Gohir.D08G138060' => 'ghi', 'Gohir.D09G072300' => 'ghi', 'Gohir.D10G041400' => 'ghi', 'Gohir.D11G191020' => 'ghi', 'Gohir.D11G212066' => 'ghi', 'Gohir.D12G036300' => 'ghi', 'Gohir.D12G168600' => 'ghi', 'Gohir.D13G150600' => 'ghi', 'Gorai.001G057300' => 'gra', 'Gorai.002G069900' => 'gra', 'Gorai.002G200000' => 'gra', 'Gorai.003G067600' => 'gra', 'Gorai.005G074800' => 'gra', 'Gorai.006G087300' => 'gra', 'Gorai.008G037500' => 'gra', 'Gorai.008G181400' => 'gra', 'Gorai.009G169400' => 'gra', 'Gorai.009G387900' => 'gra', 'Gorai.010G013300' => 'gra', 'Gorai.010G153800' => 'gra', 'Gorai.010G255800' => 'gra', 'Gorai.011G043700' => 'gra', 'Gorai.011G198900' => 'gra', 'Gorai.013G168400' => 'gra', 'GSVIVG01005212001' => 'vvi', 'GSVIVG01006163001' => 'vvi', 'GSVIVG01009625001' => 'vvi', 'GSVIVG01014338001' => 'vvi', 'GSVIVG01020005001' => 'vvi', 'GSVIVG01021450001' => 'vvi', 'GSVIVG01023975001' => 'vvi', 'GSVIVG01034490001' => 'vvi', 'HanXRQChr04g0112071' => 'han', 'HanXRQChr05g0131151' => 'han', 'HanXRQChr09g0262371' => 'han', 'HanXRQChr09g0268401' => 'han', 'HanXRQChr10g0279241' => 'han', 'HanXRQChr10g0297961' => 'han', 'HanXRQChr11g0326231' => 'han', 'HanXRQChr11g0328471' => 'han', 'HanXRQChr16g0507941' => 'han', 'HanXRQChr17g0560211' => 'han', 'Haze_02108' => 'cav', 'Haze_02428' => 'cav', 'Haze_05593' => 'cav', 'Haze_06448' => 'cav', 'Haze_09427' => 'cav', 'Haze_12022' => 'cav', 'Haze_17612' => 'cav', 'Haze_17928' => 'cav', 'Hma1.2p1_0032F.1_g019250' => 'hma', 'Hma1.2p1_0163F.1_g072690' => 'hma', 'Hma1.2p1_0265F.1_g106710' => 'hma', 'Hma1.2p1_0286F.1_g113970' => 'hma', 'Hma1.2p1_0363F.1_g136640' => 'hma', 'Hma1.2p1_0584F.1_g183470' => 'hma', 'Hma1.2p1_0885F.1_g232570' => 'hma', 'HPP92_006022' => 'vpl', 'HPP92_007320' => 'vpl', 'HPP92_011521' => 'vpl', 'HPP92_019387' => 'vpl', 'HPP92_024038' => 'vpl', 'Hund05891' => 'sun', 'Hund06450' => 'sun', 'Hund12053' => 'sun', 'Hund16800' => 'sun', 'Hund21222' => 'sun', 'Hund22896' => 'sun', 'Hund23746' => 'sun', 'Hund27083' => 'sun', 'Lalb_Chr02g0141831' => 'lal', 'Lalb_Chr02g0141841' => 'lal', 'Lalb_Chr05g0220411' => 'lal', 'Lalb_Chr06g0162081' => 'lal', 'Lalb_Chr09g0327651' => 'lal', 'Lalb_Chr13g0295051' => 'lal', 'Lalb_Chr15g0086801' => 'lal', 'Lalb_Chr16g0383781' => 'lal', 'Lalb_Chr16g0383791' => 'lal', 'Lalb_Chr18g0055441' => 'lal', 'Lalb_Chr18g0059611' => 'lal', 'Lalb_Chr20g0109661' => 'lal', 'Lalb_Chr20g0109831' => 'lal', 'Lalb_Chr20g0121871' => 'lal', 'Lalb_Chr22g0355361' => 'lal', 'Lalb_Chr25g0286371' => 'lal', 'Lj1A1187G43' => 'lonja', 'Lj1A1205T50' => 'lonja', 'Lj1A800G33' => 'lonja', 'Lj1C1187T7' => 'lonja', 'Lj1C843T11' => 'lonja', 'Lj1g0010940' => 'lja', 'Lj2A288T69' => 'lonja', 'Lj3g0024276' => 'lja', 'Lj4A47T76' => 'lonja', 'Lj4g0005805' => 'lja', 'Lj4g0006097' => 'lja', 'Lj4g0008528' => 'lja', 'Lj4g0024907' => 'lja', 'Lj5g0012472' => 'lja', 'Lj5g0018648' => 'lja', 'Lj6C789G1' => 'lonja', 'Lj6g0004000' => 'lja', 'Lj7A292G67' => 'lonja', 'Lj7A292T64' => 'lonja', 'Lj9A400T58' => 'lonja', 'Lsat_1_v5_gn_1_126181' => 'lsa', 'Lsat_1_v5_gn_4_123041' => 'lsa', 'Lsat_1_v5_gn_4_133620' => 'lsa', 'Lsat_1_v5_gn_4_53221' => 'lsa', 'Lsat_1_v5_gn_4_71961' => 'lsa', 'Lsat_1_v5_gn_7_105241' => 'lsa', 'Lsat_1_v5_gn_7_21361' => 'lsa', 'Lsat_1_v5_gn_7_28860' => 'lsa', 'Lsat_1_v5_gn_7_31260' => 'lsa', 'Lsat_1_v5_gn_8_52801' => 'lsa', 'Manes.02G191400' => 'mes', 'Manes.03G110100' => 'mes', 'Manes.04G071100' => 'mes', 'Manes.05G100500' => 'mes', 'Manes.05G164700' => 'mes', 'Manes.15G087000' => 'mes', 'Manes.15G121500' => 'mes', 'Manes.16G028300' => 'mes', 'Manes.17G046100' => 'mes', 'Manes.17G069800' => 'mes', 'Manes.18G100500' => 'mes', 'Mapoly0002s0109' => 'mpo', 'Mapoly0024s0007' => 'mpo', 'Mapoly0089s0032' => 'mpo', 'MBI04_g42241_MAGBIO' => 'mbi', 'MBI05_g11988_MAGBIO' => 'mbi', 'MBI05_g35452_MAGBIO' => 'mbi', 'MBI07_g30179_MAGBIO' => 'mbi', 'MBI07_g35859_MAGBIO' => 'mbi', 'MBI07_g35860_MAGBIO' => 'mbi', 'MBI07_g37166_MAGBIO' => 'mbi', 'MBI08_g18172_MAGBIO' => 'mbi', 'MBI09_g08441_MAGBIO' => 'mbi', 'MBI13_g01676_MAGBIO' => 'mbi', 'MBI14_g42955_MAGBIO' => 'mbi', 'MBI16_g13161_MAGBIO' => 'mbi', 'MBI17_g27204_MAGBIO' => 'mbi', 'MBI19_g21595_MAGBIO' => 'mbi', 'MD00G1148400' => 'mdo', 'MD02G1301200' => 'mdo', 'MD03G1227800' => 'mdo', 'MD05G1041100' => 'mdo', 'MD05G1124800' => 'mdo', 'MD05G1284000' => 'mdo', 'MD05G1338800' => 'mdo', 'MD05G1338900' => 'mdo', 'MD07G1022800' => 'mdo', 'MD10G1047500' => 'mdo', 'MD10G1127500' => 'mdo', 'MD10G1262300' => 'mdo', 'MD10G1293800' => 'mdo', 'MD16G1074300' => 'mdo', 'Medtr1g021670' => 'mtr', 'Medtr1g096320' => 'mtr', 'Medtr2g013690' => 'mtr', 'Medtr2g019450' => 'mtr', 'Medtr2g085170' => 'mtr', 'Medtr4g088785' => 'mtr', 'Medtr8g055930' => 'mtr', 'Medtr8g085850' => 'mtr', 'MELO3C002605.2' => 'cme', 'MELO3C003891.2' => 'cme', 'MELO3C004012.2' => 'cme', 'MELO3C007134.2' => 'cme', 'MELO3C008118.2' => 'cme', 'MELO3C016700.2' => 'cme', 'MELO3C024127.2' => 'cme', 'MELO3C033361.2' => 'cme', 'MELO3C033362.2' => 'cme', 'Migut.C00430' => 'egut', 'Migut.C01246' => 'egut', 'Migut.E00101' => 'egut', 'Migut.H01486' => 'egut', 'Migut.H01939' => 'egut', 'Migut.K00360' => 'egut', 'Migut.M00910' => 'egut', 'Migut.M01139' => 'egut', 'Migut.N02677' => 'egut', 'MSTRG.13252' => 'ama', 'MSTRG.14701' => 'ama', 'MSTRG.1521' => 'ama', 'MSTRG.15884' => 'ama', 'MSTRG.16242' => 'ama', 'MSTRG.22285' => 'ama', 'MSTRG.22444' => 'ama', 'MSTRG.2349' => 'ama', 'MSTRG.26308' => 'ama', 'MSTRG.28296' => 'ama', 'MSTRG.9895' => 'ama', 'Nitab4.5_0000110g0060' => 'nta', 'Nitab4.5_0000420g0130' => 'nta', 'Nitab4.5_0000422g0030' => 'nta', 'Nitab4.5_0000560g0180' => 'nta', 'Nitab4.5_0000703g0100' => 'nta', 'Nitab4.5_0000786g0200' => 'nta', 'Nitab4.5_0001336g0020' => 'nta', 'Nitab4.5_0001796g0030' => 'nta', 'Nitab4.5_0003348g0060' => 'nta', 'Nitab4.5_0003698g0040' => 'nta', 'Nitab4.5_0003942g0090' => 'nta', 'Nitab4.5_0004775g0070' => 'nta', 'Nitab4.5_0004864g0030' => 'nta', 'Nitab4.5_0005615g0020' => 'nta', 'Nitab4.5_0009288g0030' => 'nta', 'Nitab4.5_0009341g0010' => 'nta', 'Nitab4.5_0009535g0010' => 'nta', 'Nn1g03995' => 'nnu', 'Nn1g04100' => 'nnu', 'Nn1g06530' => 'nnu', 'Nn3g16404' => 'nnu', 'Nn3g17212' => 'nnu', 'Nn3g20776' => 'nnu', 'Nn3g21923' => 'nnu', 'Nn5g27737' => 'nnu', 'Nn5g29461' => 'nnu', 'Nn7g38355' => 'nnu', 'Nn8g39873' => 'nnu', 'Oeu000548.2' => 'oeu', 'Oeu004672.1' => 'oeu', 'Oeu015605.2' => 'oeu', 'Oeu016092.1' => 'oeu', 'Oeu017879.3' => 'oeu', 'Oeu024910.1' => 'oeu', 'Oeu028965.1' => 'oeu', 'Oeu031269.1' => 'oeu', 'Oeu031270.1' => 'oeu', 'Oeu032535.1' => 'oeu', 'Oeu034151.1' => 'oeu', 'Oeu034152.1' => 'oeu', 'Oeu034588.2' => 'oeu', 'Oeu050846.1' => 'oeu', 'Oeu050849.2' => 'oeu', 'Oeu051063.2' => 'oeu', 'Oeu052368.1' => 'oeu', 'Oeu052370.1' => 'oeu', 'Os01g0210400' => 'osa', 'Os01g0304300' => 'osa', 'Os01g0749100' => 'osa', 'Os02g0745800' => 'osa', 'Os03g0769050' => 'osa', 'Os05g0531500' => 'osa', 'Os06g0724300' => 'osa', 'Os11g0198100' => 'osa', 'Peaxi162Scf00069g01425' => 'pax', 'Peaxi162Scf00280g00811' => 'pax', 'Peaxi162Scf00310g00615' => 'pax', 'Peaxi162Scf00362g00542' => 'pax', 'Peaxi162Scf00461g00310' => 'pax', 'Peaxi162Scf00530g00118' => 'pax', 'Peaxi162Scf00541g00057' => 'pax', 'Peaxi162Scf00661g00017' => 'pax', 'Peaxi162Scf00926g00027' => 'pax', 'Peaxi162Scf01064g00263' => 'pax', 'Peaxi162Scf01211g00135' => 'pax', 'PGR004G2336' => 'pgr', 'PGR042G0327' => 'pgr', 'PGR042G1957' => 'pgr', 'PGR042G2003' => 'pgr', 'PGR042G3929' => 'pgr', 'PGR083G1137' => 'pgr', 'PGR083G1364' => 'pgr', 'PGSC0003DMG400003381' => 'stu', 'PGSC0003DMG400003417' => 'stu', 'PGSC0003DMG400008981' => 'stu', 'PGSC0003DMG400012417' => 'stu', 'PGSC0003DMG400012823' => 'stu', 'PGSC0003DMG400016885' => 'stu', 'PGSC0003DMG400022812' => 'stu', 'PGSC0003DMG400029726' => 'stu', 'PGSC0003DMG401009243' => 'stu', 'PGSC0003DMG401031505' => 'stu', 'PGSC0003DMG402031505' => 'stu', 'Phvul.001G017600' => 'pvu', 'Phvul.002G193500' => 'pvu', 'Phvul.002G228900' => 'pvu', 'Phvul.002G236800' => 'pvu', 'Phvul.003G049500' => 'pvu', 'Phvul.005G072000' => 'pvu', 'Phvul.006G164800' => 'pvu', 'Phvul.006G185100' => 'pvu', 'Phvul.007G090000' => 'pvu', 'Potri.001G399800' => 'ptr', 'Potri.002G149900' => 'ptr', 'Potri.004G044100' => 'ptr', 'Potri.004G177600' => 'ptr', 'Potri.009G138000' => 'ptr', 'Potri.010G094000' => 'ptr', 'Potri.011G053000' => 'ptr', 'Potri.011G119300' => 'ptr', 'Potri.013G113700' => 'ptr', 'Potri.018G107800' => 'ptr', 'Potri.019G084100' => 'ptr', 'Pp3c14_23720' => 'ppa', 'Pp3c16_6340' => 'ppa', 'Pp3c23_13420' => 'ppa', 'Pp3c24_2740' => 'ppa', 'Pp3c25_860' => 'ppa', 'Pp3c8_21750' => 'ppa', 'Prupe.1G273000' => 'ppe', 'Prupe.1G273700' => 'ppe', 'Prupe.1G274100' => 'ppe', 'Prupe.2G023300' => 'ppe', 'Prupe.4G048000' => 'ppe', 'Prupe.4G080400' => 'ppe', 'Prupe.4G181200' => 'ppe', 'Prupe.8G056900' => 'ppe', 'Prupe.8G168700' => 'ppe', 'Psat1g189080' => 'psa', 'Psat1g204760' => 'psa', 'Psat4g175560' => 'psa', 'Psat4g177720' => 'psa', 'Psat5g244240' => 'psa', 'Psat6g010720' => 'psa', 'Psat6g187200' => 'psa', 'Psat7g072040' => 'psa', 'PSO017G3501' => 'pso', 'PSO063G2148' => 'pso', 'PSO063G5608' => 'pso', 'PSO210G6392' => 'pso', 'PSO541G2319' => 'pso', 'PSO541G2836' => 'pso', 'PSO541G4012' => 'pso', 'PSO541G6253' => 'pso', 'PSO675G0580' => 'pso', 'PSO675G0856' => 'pso', 'PSO675G5635' => 'pso', 'PSO675G9157' => 'pso', 'PSO832G1660' => 'pso', 'PSO832G1969' => 'pso', 'QL02p007186' => 'qlo', 'QL02p033904' => 'qlo', 'QL03p064391' => 'qlo', 'QL05p040593' => 'qlo', 'QL05p058242' => 'qlo', 'QL08p021825' => 'qlo', 'QL11p004981' => 'qlo', 'RcHm_v2.0_Chr1g0318301' => 'rch', 'RcHm_v2.0_Chr4g0418501' => 'rch', 'RcHm_v2.0_Chr4g0439971' => 'rch', 'RcHm_v2.0_Chr5g0008541' => 'rch', 'RcHm_v2.0_Chr5g0014101' => 'rch', 'RcHm_v2.0_Chr5g0014131' => 'rch', 'RcHm_v2.0_Chr5g0033621' => 'rch', 'RcHm_v2.0_Chr6g0272041' => 'rch', 'RcHm_v2.0_Chr6g0278831' => 'rch', 'Rhsim02G0130400' => 'rsi', 'Rhsim02G0171100' => 'rsi', 'Rhsim05G0053000' => 'rsi', 'Rhsim05G0053100' => 'rsi', 'Rhsim06G0096500' => 'rsi', 'Rhsim06G0096600' => 'rsi', 'Rhsim06G0199100' => 'rsi', 'Rhsim12G0062300' => 'rsi', 'Rhsim12G0062800' => 'rsi', 'Sabra02G0118600' => 'sbr', 'Sabra04G0027300' => 'sbr', 'Sabra04G0119500' => 'sbr', 'Sabra08G0112500' => 'sbr', 'Sabra11G0036800' => 'sbr', 'Sabra11G0103800' => 'sbr', 'Sabra13G0096300' => 'sbr', 'Sabra16G0262300' => 'sbr', 'Sabra18G0091700' => 'sbr', 'Sabra19G0095400' => 'sbr', 'SalBow6G3080' => 'sbo', 'SalBow7G1157' => 'sbo', 'SalBow7G2123' => 'sbo', 'SalBow7G2285' => 'sbo', 'SalBow7G3537' => 'sbo', 'SalBow8G2947' => 'sbo', 'SalBow8G4463' => 'sbo', 'SalBow8G5466' => 'sbo', 'Sc01g0001750' => 'sci', 'Sc02g0006640' => 'sci', 'Sc02g0006670' => 'sci', 'Sc04g0008220' => 'sci', 'Sc05g0006190' => 'sci', 'Sc08g0002760' => 'sci', 'Sc17g0006170' => 'sci', 'Sc22g0002050' => 'sci', 'Sc23g0001190' => 'sci', 'Sc24g0000980' => 'sci', 'Sed0006245' => 'sed', 'Sed0007543' => 'sed', 'Sed0009411' => 'sed', 'Sed0010765' => 'sed', 'Sed0012944' => 'sed', 'Sed0014682' => 'sed', 'Sed0016174' => 'sed', 'Sed0016796' => 'sed', 'Sed0020317' => 'sed', 'Sed0021467' => 'sed', 'SEGI_01316' => 'sgi', 'SEGI_03374' => 'sgi', 'SEGI_16265' => 'sgi', 'SEGI_18569' => 'sgi', 'SEGI_20351' => 'sgi', 'SEGI_26395' => 'sgi', 'SEGI_29469' => 'sgi', 'SEGI_34771' => 'sgi', 'SEGI_36769' => 'sgi', 'SEGI_37139' => 'sgi', 'SGA_v2.0_scaffold100G29687' => 'sas', 'SGA_v2.0_scaffold118G32472' => 'sas', 'SGA_v2.0_scaffold14G07051' => 'sas', 'SGA_v2.0_scaffold183G39845' => 'sas', 'SGA_v2.0_scaffold1G00174' => 'sas', 'SGA_v2.0_scaffold22G09714' => 'sas', 'SGA_v2.0_scaffold333G48992' => 'sas', 'SGA_v2.0_scaffold46G17491' => 'sas', 'SGA_v2.0_scaffold49G18294' => 'sas', 'SGA_v2.0_scaffold63G21658' => 'sas', 'SHI01741' => 'shi', 'SHI05771' => 'shi', 'SHI18077' => 'shi', 'SHI20525' => 'shi', 'SHI20527' => 'shi', 'SHI20528' => 'shi', 'SMO172G0185' => 'smo', 'SMO198G0020' => 'smo', 'SMO351G0006' => 'smo', 'SMO356G0118' => 'smo', 'SMO358G0296' => 'smo', 'SMO367G0079' => 'smo', 'SMO367G1277' => 'smo', 'Solyc01g014220.3' => 'sly', 'Solyc01g111770.2' => 'sly', 'Solyc02g078180.3' => 'sly', 'Solyc03g006430.3' => 'sly', 'Solyc03g006456.1' => 'sly', 'Solyc03g079860.2' => 'sly', 'Solyc04g079770.3' => 'sly', 'Solyc05g007430.4' => 'sly', 'Solyc07g063150.3' => 'sly', 'Solyc08g016620.3' => 'sly', 'Solyc09g057590.3' => 'sly', 'Solyc09g057600.1' => 'sly', 'Solyc10g009050.3' => 'sly', 'Solyc11g017420.2' => 'sly', 'Sopen01g053810' => 'spe', 'Sopen02g023040' => 'spe', 'Sopen03g002440' => 'spe', 'Sopen04g033350' => 'spe', 'Sopen05g003310' => 'spe', 'Sopen07g004050' => 'spe', 'Sopen07g031340' => 'spe', 'Sopen08g006990' => 'spe', 'Sopen10g004830' => 'spe', 'Sopen11g009370' => 'spe', 'Sp1g24450' => 'spa', 'Sp1g29670' => 'spa', 'Sp1g39600' => 'spa', 'Sp2g11080' => 'spa', 'Sp2g13970' => 'spa', 'Sp4g16130' => 'spa', 'Sp6g13080' => 'spa', 'Sp7g37270' => 'spa', 'TAR371G0065' => 'tar', 'TAR376G0340' => 'tar', 'TAR376G0435' => 'tar', 'TAR381G0002' => 'tar', 'TAR381G1236' => 'tar', 'TAR624G0055' => 'tar', 'TAR624G0324' => 'tar', 'TAR624G0696' => 'tar', 'TAR624G0906' => 'tar', 'TAR625G0107' => 'tar', 'TAR626G0015' => 'tar', 'TAR626G1356' => 'tar', 'TAR627G0888' => 'tar', 'TAR628G0399' => 'tar', 'TAR628G1327' => 'tar', 'TAR629G2831' => 'tar', 'TAR629G2874' => 'tar', 'TAR633G1432' => 'tar', 'TAR633G2771' => 'tar', 'THA.LOC104803394' => 'tha', 'THA.LOC104805153' => 'tha', 'THA.LOC104806784' => 'tha', 'THA.LOC104810473' => 'tha', 'THA.LOC104813100' => 'tha', 'THA.LOC104814215' => 'tha', 'THA.LOC104815554' => 'tha', 'THA.LOC104820544' => 'tha', 'THA.LOC104824754' => 'tha', 'THA.LOC104827717' => 'tha', 'Thecc.02G031400' => 'tca', 'Thecc.02G055900' => 'tca', 'Thecc.02G350800' => 'tca', 'Thecc.06G150900' => 'tca', 'Thecc.06G186600' => 'tca', 'Thecc.07G089600' => 'tca', 'Thecc.08G020400' => 'tca', 'Thecc.08G182100' => 'tca', 'Thhalv10000873m.g' => 'esa', 'Thhalv10004185m.g' => 'esa', 'Thhalv10006981m.g' => 'esa', 'Thhalv10007204m.g' => 'esa', 'Thhalv10011374m.g' => 'esa', 'Thhalv10013482m.g' => 'esa', 'Thhalv10017801m.g' => 'esa', 'Thhalv10024983m.g' => 'esa', 'TPR.G12072' => 'tpr', 'TPR.G15769' => 'tpr', 'TPR.G16504' => 'tpr', 'TPR.G16506' => 'tpr', 'TPR.G24345' => 'tpr', 'TPR.G26666' => 'tpr', 'TPR.G27320' => 'tpr', 'TPR.G31819' => 'tpr', 'TPR.G38879' => 'tpr', 'TPR.G39015' => 'tpr', 'TPR.G8819' => 'tpr', 'TWI09G0924' => 'twi', 'TWI12G0811' => 'twi', 'TWI12G1294' => 'twi', 'TWI31G0150' => 'twi', 'TWI36G1262' => 'twi', 'TWI38G1287' => 'twi', 'TWI38G1633' => 'twi', 'TWI38G1982' => 'twi', 'TWI39G0116' => 'twi', 'TWI60G1011' => 'twi', 'TWI63G0171' => 'twi', 'TWI73G0839' => 'twi', 'TWI79G1511' => 'twi', 'unitig_0.g915' => 'ugi', 'unitig_0.g916' => 'ugi', 'unitig_21.g20219' => 'ugi', 'unitig_21.g20416' => 'ugi', 'unitig_578.g16132' => 'ugi', 'unitig_578.g16718' => 'ugi', 'unitig_62.g23481' => 'ugi', 'unitig_744.g24535' => 'ugi', 'unitig_749.g13525' => 'ugi', 'vmacro01248' => 'vma', 'vmacro02290' => 'vma', 'vmacro10946' => 'vma', 'vmacro11865' => 'vma', 'vmacro12493' => 'vma', 'vmacro17322' => 'vma', 'vmacro21599' => 'vma', 'vmacro23041' => 'vma', 'VMungo0251G0004' => 'vmu', 'VMungo0251G2639' => 'vmu', 'VMungo0251G2967' => 'vmu', 'VMungo0540G0864' => 'vmu', 'VMungo0540G1569' => 'vmu', 'VMungo0647G0317' => 'vmu', 'VMungo0720G1373' => 'vmu', 'VMungo0720G1508' => 'vmu', 'VMungo1080G0485' => 'vmu', 'VMungo1215G3177' => 'vmu', 'Zm00001eb112600' => 'zma', 'Zm00001eb120220' => 'zma', 'Zm00001eb153240' => 'zma', 'Zm00001eb168880' => 'zma', 'Zm00001eb213920' => 'zma', 'Zm00001eb228280' => 'zma', 'Zm00001eb254580' => 'zma', 'Zm00001eb272180' => 'zma', 'Zm00001eb293190' => 'zma', 'Zm00001eb322930' => 'zma', 'Zm00001eb353360' => 'zma', 'Zm00001eb353390' => 'zma', 'Zm00001eb353430' => 'zma', 'Zm00001eb353440' => 'zma', 'Zm00001eb353780' => 'zma' ) $gf_id = 'HOM05D000499' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000499' ) $data_identifier = 'HOM05D000499' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 29, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 12, 'amhyb' => (int) 8, 'aly' => (int) 12, 'aox' => (int) 9, 'arhy' => (int) 26, 'ath' => (int) 8, 'atr' => (int) 7, 'acertr' => (int) 10, 'cqu' => (int) 15, 'bca' => (int) 29, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 11, 'cansat' => (int) 8, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 9, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 8, 'cpa' => (int) 10, 'csa' => (int) 7, 'camsi' => (int) 20, 'dca' => (int) 8, 'din' => (int) 12, 'dzi' => (int) 14, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 6, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 38, 'gra' => (int) 16, 'vvi' => (int) 8, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 5, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 11, 'lja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 11, 'mpo' => (int) 3, 'mbi' => (int) 14, 'mdo' => (int) 14, 'mtr' => (int) 8, 'cme' => (int) 9, 'egut' => (int) 9, 'ama' => (int) 11, 'nta' => (int) 17, 'nnu' => (int) 11, 'oeu' => (int) 18, 'osa' => (int) 8, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 6, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 9, 'rsi' => (int) 9, 'sbr' => (int) 10, 'sbo' => (int) 8, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 10, 'sas' => (int) 10, 'shi' => (int) 6, 'smo' => (int) 7, 'sly' => (int) 14, 'spe' => (int) 10, 'spa' => (int) 8, 'tar' => (int) 19, 'tha' => (int) 10, 'tca' => (int) 8, 'esa' => (int) 8, 'tpr' => (int) 11, 'twi' => (int) 13, 'ugi' => (int) 9, 'vma' => (int) 8, 'vmu' => (int) 10, 'zma' => (int) 15 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb353780' $species_info = array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ) $local_species = 'aox' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000499', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1066', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p29780' => 'bna', 'A02p33180' => 'bna', 'A03p16470' => 'bna', 'A03p66010' => 'bna', 'A04p25970' => 'bna', 'A06p01270' => 'bna', 'A06p46080' => 'bna', 'A07p11400' => 'bna', 'A08p01840' => 'bna', 'A08p08230' => 'bna', 'A08p25740' => 'bna', 'A09p32070' => 'bna', 'A09p37830' => 'bna', 'A09p42840' => 'bna', 'A09p42850' => 'bna', 'Aa31LG10G2060' => 'aar', 'Aa31LG2G7410' => 'aar', 'Aa31LG6G10200' => 'aar', 'Aa31LG6G16680' => 'aar', 'Aa31LG6G8470' => 'aar', 'Aa31LG9G12730' => 'aar', 'Aa31LG9G13680' => 'aar', 'Aa31LG9G14920' => 'aar', 'Aa31LG9G6650' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4977' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5467' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3254' => 'aag', 'Actinidia02578' => 'ach', 'Actinidia07693' => 'ach', 'Actinidia08413' => 'ach', 'Actinidia08414' => 'ach', 'Actinidia15289' => 'ach', 'Actinidia19871' => 'ach', 'Actinidia21475' => 'ach', 'Actinidia22576' => 'ach', 'Actinidia28327' => 'ach', 'Actinidia32491' => 'ach', 'Actinidia39463' => 'ach', 'Actinidia39571' => 'ach', 'Ah.01g013750' => 'amhyb', 'Ah.01g023210' => 'amhyb', 'Ah.04g164850' => 'amhyb', 'Ah.05g178060' => 'amhyb', 'Ah.07g204270' => 'amhyb', 'Ah.07g208480' => 'amhyb', 'Ah.09g237410' => 'amhyb', 'Ah.14g089460' => 'amhyb', 'AL1G41790' => 'aly', 'AL1G49050' => 'aly', 'AL1G53810' => 'aly', 'AL1G61400' => 'aly', 'AL4G18580' => 'aly', 'AL5G12510' => 'aly', 'AL5G12540' => 'aly', 'AL6G43230' => 'aly', 'AL7G10370' => 'aly', 'AL7G19250' => 'aly', 'AL8G12240' => 'aly', 'AL8G18540' => 'aly', 'Aqoxy1G02409' => 'aox', 'Aqoxy2G03993' => 'aox', 'Aqoxy3G03357' => 'aox', 'Aqoxy4G00785' => 'aox', 'Aqoxy5G02598' => 'aox', 'Aqoxy6G00132' => 'aox', 'Aqoxy7G01776' => 'aox', 'Aqoxy7G02316' => 'aox', 'Aqoxy7G03973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.12AFKW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B8730' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27IQR1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3F75VG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3RE0GA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41TCQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.527VTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FIR39' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5W8UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DA38EV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ63HS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H1I32C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HC27T5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4M8AP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7N3CZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9UVDZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LS1NQA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT1D4B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SKC4TM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCFV76' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF9Q1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQWD9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1ZM88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WE07RT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YCK7VH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJE6Q6' => 'arhy', 'AT1G28240' => 'ath', 'AT1G34550' => 'ath', 'AT1G53040' => 'ath', 'AT2G02910' => 'ath', 'AT4G09630' => 'ath', 'AT4G38500' => 'ath', 'AT5G42660' => 'ath', 'AT5G46220' => 'ath', 'ATR0152G026' => 'atr', 'ATR0564G343' => 'atr', 'ATR0706G151' => 'atr', 'ATR0733G207' => 'atr', 'ATR0751G234' => 'atr', 'ATR0807G048' => 'atr', 'ATR1091G084' => 'atr', 'Atru.chr10.1229' => 'acertr', 'Atru.chr10.1230' => 'acertr', 'Atru.chr10.1874' => 'acertr', 'Atru.chr11.1808' => 'acertr', 'Atru.chr13.1795' => 'acertr', 'Atru.chr13.570' => 'acertr', 'Atru.chr2.2608' => 'acertr', 'Atru.chr2.2609' => 'acertr', 'Atru.chr5.3428' => 'acertr', 'Atru.chr8.1171' => 'acertr', 'AUR62004651' => 'cqu', 'AUR62008675' => 'cqu', 'AUR62010014' => 'cqu', 'AUR62013004' => 'cqu', 'AUR62014825' => 'cqu', 'AUR62015015' => 'cqu', 'AUR62015151' => 'cqu', 'AUR62017020' => 'cqu', 'AUR62019422' => 'cqu', 'AUR62023570' => 'cqu', 'AUR62025571' => 'cqu', 'AUR62029098' => 'cqu', 'AUR62033863' => 'cqu', 'AUR62034296' => 'cqu', 'AUR62040075' => 'cqu', 'BcaB02g07334' => 'bca', 'BcaB02g10575' => 'bca', 'BcaB03g12119' => 'bca', 'BcaB03g12120' => 'bca', 'BcaB03g13945' => 'bca', 'BcaB04g17123' => 'bca', 'BcaB04g17867' => 'bca', 'BcaB04g19839' => 'bca', 'BcaB07g30317' => 'bca', 'BcaB07g32432' => 'bca', 'BcaB07g33362' => 'bca', 'BcaB08g36611' => 'bca', 'BcaC01g00028' => 'bca', 'BcaC01g01356' => 'bca', 'BcaC01g02034' => 'bca', 'BcaC01g06051' => 'bca', 'BcaC03g16839' => 'bca', 'BcaC03g17176' => 'bca', 'BcaC05g26829' => 'bca', 'BcaC06g31490' => 'bca', 'BcaC06g35344' => 'bca', 'BcaC06g36570' => 'bca', 'BcaC07g37537' => 'bca', 'BcaC08g43491' => 'bca', 'BcaC08g43773' => 'bca', 'BcaNung00234' => 'bca', 'BcaNung01982' => 'bca', 'BcaNung03707' => 'bca', 'BcaNung06454' => 'bca', 'BolC2t10762H' => 'bol', 'BolC2t11191H' => 'bol', 'BolC3t14322H' => 'bol', 'BolC3t19747H' => 'bol', 'BolC3t21425H' => 'bol', 'BolC4t27800H' => 'bol', 'BolC5t31423H' => 'bol', 'BolC6t35951H' => 'bol', 'BolC6t36282H' => 'bol', 'BolC7t40678H' => 'bol', 'BolC7t40679H' => 'bol', 'BolC7t42222H' => 'bol', 'BolC7t43492H' => 'bol', 'BolC7t46785H' => 'bol', 'BolC8t47853H' => 'bol', 'BolC9t56805H' => 'bol', 'BraA02t08000Z' => 'bra', 'BraA02t08341Z' => 'bra', 'BraA03t10936Z' => 'bra', 'BraA03t15657Z' => 'bra', 'BraA04t18100Z' => 'bra', 'BraA05t20523Z' => 'bra', 'BraA06t23353Z' => 'bra', 'BraA06t27473Z' => 'bra', 'BraA06t27769Z' => 'bra', 'BraA07t28928Z' => 'bra', 'BraA08t32236Z' => 'bra', 'BraA08t32841Z' => 'bra', 'BraA08t34524Z' => 'bra', 'BraA09t38742Z' => 'bra', 'BraA09t39295Z' => 'bra', 'C02p47180' => 'bna', 'C02p50990' => 'bna', 'C03p19360' => 'bna', 'C03p74950' => 'bna', 'C03p91000' => 'bna', 'C04p63260' => 'bna', 'C05p27050' => 'bna', 'C06p08750' => 'bna', 'C06p11490' => 'bna', 'C07p02820' => 'bna', 'C07p17180' => 'bna', 'C07p29440' => 'bna', 'C07p63730' => 'bna', 'C09p39260' => 'bna', 'CAN.G1164.34' => 'can', 'CAN.G1164.39' => 'can', 'CAN.G1530.3' => 'can', 'CAN.G162.61' => 'can', 'CAN.G176.6' => 'can', 'CAN.G289.49' => 'can', 'CAN.G370.21' => 'can', 'CAN.G370.22' => 'can', 'CAN.G371.117' => 'can', 'CAN.G58.37' => 'can', 'CAN.G588.98' => 'can', 'CANSAT21G2266' => 'cansat', 'CANSAT25G2799' => 'cansat', 'CANSAT35G0862' => 'cansat', 'CANSAT35G1704' => 'cansat', 'CANSAT35G1760' => 'cansat', 'CANSAT56G3971' => 'cansat', 'CANSAT56G4116' => 'cansat', 'CANSAT80G1259' => 'cansat', 'CARHR027730' => 'chi', 'CARHR033880' => 'chi', 'CARHR043270' => 'chi', 'CARHR145330' => 'chi', 'CARHR145340' => 'chi', 'CARHR175570' => 'chi', 'CARHR181570' => 'chi', 'CARHR258470' => 'chi', 'CARHR260490' => 'chi', 'CARHR294220' => 'chi', 'Carub.0001s2668' => 'cru', 'Carub.0001s3257' => 'cru', 'Carub.0001s4220' => 'cru', 'Carub.0005s0179' => 'cru', 'Carub.0006s2807' => 'cru', 'Carub.0007s0039' => 'cru', 'Carub.0008s0169' => 'cru', 'Carub.0008s0636' => 'cru', 'Ca_00338_v3' => 'car', 'Ca_00542_v3' => 'car', 'Ca_01844_v3' => 'car', 'Ca_10611_v3' => 'car', 'Ca_13326_v3' => 'car', 'Ca_17944_v3' => 'car', 'Ca_18546_v3' => 'car', 'Ca_24219_v3' => 'car', 'Ca_29972_v3' => 'car', 'CBR_g3681' => 'cbr', 'CBR_g40021' => 'cbr', 'Cc01_g08140' => 'ccan', 'Cc02_g13410' => 'ccan', 'Cc02_g37480' => 'ccan', 'Cc05_g12030' => 'ccan', 'Cc09_g03370' => 'ccan', 'Cc09_g10300' => 'ccan', 'Cc10_g03530' => 'ccan', 'Cc10_g11380' => 'ccan', 'CDE01G0176' => 'cde', 'CDE02G0675' => 'cde', 'CDE02G0942' => 'cde', 'CDE02G1153' => 'cde', 'CDE02G4177' => 'cde', 'CDE04G2117' => 'cde', 'CDE04G2736' => 'cde', 'CDE08G1161' => 'cde', 'CDE09G1238' => 'cde', 'Cfa000467' => 'cfa', 'Cfa000947' => 'cfa', 'Cfa004969' => 'cfa', 'Cfa005284' => 'cfa', 'Cfa008993' => 'cfa', 'Cfa018187' => 'cfa', 'Cfa018454' => 'cfa', 'Cfa020585' => 'cfa', 'Ciclev10000424m.g' => 'ccl', 'Ciclev10003605m.g' => 'ccl', 'Ciclev10007828m.g' => 'ccl', 'Ciclev10014620m.g' => 'ccl', 'Ciclev10015169m.g' => 'ccl', 'Ciclev10018291m.g' => 'ccl', 'Ciclev10028256m.g' => 'ccl', 'Ciclev10033822m.g' => 'ccl', 'CiPaw.05G060300' => 'cil', 'CiPaw.05G085000' => 'cil', 'CiPaw.06G083700' => 'cil', 'CiPaw.06G120300' => 'cil', 'CiPaw.09G060500' => 'cil', 'CiPaw.09G123800' => 'cil', 'CiPaw.11G169700' => 'cil', 'CiPaw.12G118300' => 'cil', 'CiPaw.15G071000' => 'cil', 'CiPaw.15G081900' => 'cil', 'ClCG01G024610' => 'cla', 'ClCG03G006070' => 'cla', 'ClCG05G019250' => 'cla', 'ClCG09G009500' => 'cla', 'ClCG11G008200' => 'cla', 'ClCG11G018080' => 'cla', 'COL.COLO4_17373' => 'col', 'COL.COLO4_22994' => 'col', 'COL.COLO4_26389' => 'col', 'COL.COLO4_27170' => 'col', 'COL.COLO4_31074' => 'col', 'COL.COLO4_31465' => 'col', 'COL.COLO4_36438' => 'col', 'COL.COLO4_36439' => 'col', 'Cpa.g.c38781' => 'cpa', 'Cpa.g.sc128.12' => 'cpa', 'Cpa.g.sc166.7' => 'cpa', 'Cpa.g.sc166.8' => 'cpa', 'Cpa.g.sc20.111' => 'cpa', 'Cpa.g.sc27.31' => 'cpa', 'Cpa.g.sc64.36' => 'cpa', 'Cpa.g.sc64.37' => 'cpa', 'Cpa.g.sc66.49' => 'cpa', 'Cpa.g.sc80.64' => 'cpa', 'CsaV3_1G012320' => 'csa', 'CsaV3_2G008480' => 'csa', 'CsaV3_2G033450' => 'csa', 'CsaV3_3G044830' => 'csa', 'CsaV3_4G033710' => 'csa', 'CsaV3_6G051730' => 'csa', 'CsaV3_7G025350' => 'csa', 'CSS0001067' => 'camsi', 'CSS0005996' => 'camsi', 'CSS0006590' => 'camsi', 'CSS0009673' => 'camsi', 'CSS0010201' => 'camsi', 'CSS0010549' => 'camsi', 'CSS0011364' => 'camsi', 'CSS0014473' => 'camsi', 'CSS0014961' => 'camsi', 'CSS0020191' => 'camsi', 'CSS0021165' => 'camsi', 'CSS0022306' => 'camsi', 'CSS0030591' => 'camsi', 'CSS0030696' => 'camsi', 'CSS0032653' => 'camsi', 'CSS0037487' => 'camsi', 'CSS0041102' => 'camsi', 'CSS0041261' => 'camsi', 'CSS0046246' => 'camsi', 'CSS0049256' => 'camsi', 'DCAR_004075' => 'dca', 'DCAR_011538' => 'dca', 'DCAR_019553' => 'dca', 'DCAR_020952' => 'dca', 'DCAR_021739' => 'dca', 'DCAR_027407' => 'dca', 'DCAR_027913' => 'dca', 'DCAR_028066' => 'dca', 'Dinv05899' => 'din', 'Dinv07563' => 'din', 'Dinv08010' => 'din', 'Dinv14125' => 'din', 'Dinv20172' => 'din', 'Dinv30743' => 'din', 'Dinv31229' => 'din', 'Dinv34162' => 'din', 'Dinv36028' => 'din', 'Dinv39368' => 'din', 'Dinv40565' => 'din', 'Dinv41706' => 'din', 'Duzib052G0089' => 'dzi', 'Duzib116G0641' => 'dzi', 'Duzib132G0069' => 'dzi', 'Duzib132G1219' => 'dzi', 'Duzib147G0278' => 'dzi', 'Duzib160G0480' => 'dzi', 'Duzib170G0661' => 'dzi', 'Duzib177G0591' => 'dzi', 'Duzib187G1353' => 'dzi', 'Duzib192G0858' => 'dzi', 'Duzib192G0883' => 'dzi', 'Duzib213G0506' => 'dzi', 'Duzib235G0289' => 'dzi', 'Duzib251G0422' => 'dzi', 'ECA232G3898' => 'eca', 'ECA233G5950' => 'eca', 'ECA234G1699' => 'eca', 'ECA234G2421' => 'eca', 'ECA236G0426' => 'eca', 'ECA236G4331' => 'eca', 'ECA248G2573' => 'eca', 'EL10Ac1g00077' => 'bvu', 'EL10Ac1g01746' => 'bvu', 'EL10Ac2g03464' => 'bvu', 'EL10Ac4g08176' => 'bvu', 'EL10Ac7g17521' => 'bvu', 'EL10Ac8g20386' => 'bvu', 'EL10Ac9g21343' => 'bvu', 'EL10Ac9g22688' => 'bvu', 'Eucgr.B03434' => 'egr', 'Eucgr.D00618' => 'egr', 'Eucgr.E02395' => 'egr', 'Eucgr.F01129' => 'egr', 'Eucgr.F02622' => 'egr', 'Eucgr.F04207' => 'egr', 'FAN01G0570' => 'fan', 'FAN03G3351' => 'fan', 'FAN06G3702' => 'fan', 'FAN07G2149' => 'fan', 'FAN10G3758' => 'fan', 'FAN11G1170' => 'fan', 'FAN11G2050' => 'fan', 'FAN11G2724' => 'fan', 'FAN12G1700' => 'fan', 'FAN12G2028' => 'fan', 'FAN15G1160' => 'fan', 'FAN15G3063' => 'fan', 'FAN16G2540' => 'fan', 'FAN16G3077' => 'fan', 'FAN16G3624' => 'fan', 'FAN17G0221' => 'fan', 'FAN20G2492' => 'fan', 'FAN20G2905' => 'fan', 'FAN21G0548' => 'fan', 'FAN21G1300' => 'fan', 'FAN22G0077' => 'fan', 'FAN22G1315' => 'fan', 'FAN24G1280' => 'fan', 'FAN24G1445' => 'fan', 'FAN24G3527' => 'fan', 'FAN25G0464' => 'fan', 'FAN25G2885' => 'fan', 'FAN25G3270' => 'fan', 'FAN27G1101' => 'fan', 'FAN27G2846' => 'fan', 'FAN27G3524' => 'fan', 'FvH4_2g11770' => 'fve', 'FvH4_2g15630' => 'fve', 'FvH4_3g05570' => 'fve', 'FvH4_3g09110' => 'fve', 'FvH4_3g19940' => 'fve', 'FvH4_4g04821' => 'fve', 'FvH4_4g31480' => 'fve', 'FvH4_7g01740' => 'fve', 'Glyma.05G130400' => 'gma', 'Glyma.05G156400' => 'gma', 'Glyma.07G197000' => 'gma', 'Glyma.08G085151' => 'gma', 'Glyma.08G114500' => 'gma', 'Glyma.08G300400' => 'gma', 'Glyma.10G215800' => 'gma', 'Glyma.12G224400' => 'gma', 'Glyma.13G179300' => 'gma', 'Glyma.13G218151' => 'gma', 'Glyma.13G238800' => 'gma', 'Glyma.13G276900' => 'gma', 'Glyma.14G078200' => 'gma', 'Glyma.15G074500' => 'gma', 'Glyma.15G094100' => 'gma', 'Glyma.17G247200' => 'gma', 'Glyma.18G120100' => 'gma', 'Glyma.20G176000' => 'gma', 'Gohir.A01G063600' => 'ghi', 'Gohir.A01G170301' => 'ghi', 'Gohir.A02G060500' => 'ghi', 'Gohir.A05G133850' => 'ghi', 'Gohir.A05G161400' => 'ghi', 'Gohir.A06G012900' => 'ghi', 'Gohir.A06G035901' => 'ghi', 'Gohir.A06G127100' => 'ghi', 'Gohir.A06G210500' => 'ghi', 'Gohir.A08G008650' => 'ghi', 'Gohir.A09G072700' => 'ghi', 'Gohir.A09G088301' => 'ghi', 'Gohir.A10G040600' => 'ghi', 'Gohir.A12G036300' => 'ghi', 'Gohir.A12G143350' => 'ghi', 'Gohir.A12G165500' => 'ghi', 'Gohir.A13G145700' => 'ghi', 'Gohir.D01G050000' => 'ghi', 'Gohir.D01G051366' => 'ghi', 'Gohir.D01G161350' => 'ghi', 'Gohir.D02G065900' => 'ghi', 'Gohir.D05G164200' => 'ghi', 'Gohir.D05G355500' => 'ghi', 'Gohir.D06G010400' => 'ghi', 'Gohir.D06G111250' => 'ghi', 'Gohir.D06G132000' => 'ghi', 'Gohir.D06G210500' => 'ghi', 'Gohir.D07G165675' => 'ghi', 'Gohir.D08G062240' => 'ghi', 'Gohir.D08G086101' => 'ghi', 'Gohir.D08G138060' => 'ghi', 'Gohir.D09G072300' => 'ghi', 'Gohir.D10G041400' => 'ghi', 'Gohir.D11G191020' => 'ghi', 'Gohir.D11G212066' => 'ghi', 'Gohir.D12G036300' => 'ghi', 'Gohir.D12G168600' => 'ghi', 'Gohir.D13G150600' => 'ghi', 'Gorai.001G057300' => 'gra', 'Gorai.002G069900' => 'gra', 'Gorai.002G200000' => 'gra', 'Gorai.003G067600' => 'gra', 'Gorai.005G074800' => 'gra', 'Gorai.006G087300' => 'gra', 'Gorai.008G037500' => 'gra', 'Gorai.008G181400' => 'gra', 'Gorai.009G169400' => 'gra', 'Gorai.009G387900' => 'gra', 'Gorai.010G013300' => 'gra', 'Gorai.010G153800' => 'gra', 'Gorai.010G255800' => 'gra', 'Gorai.011G043700' => 'gra', 'Gorai.011G198900' => 'gra', 'Gorai.013G168400' => 'gra', 'GSVIVG01005212001' => 'vvi', 'GSVIVG01006163001' => 'vvi', 'GSVIVG01009625001' => 'vvi', 'GSVIVG01014338001' => 'vvi', 'GSVIVG01020005001' => 'vvi', 'GSVIVG01021450001' => 'vvi', 'GSVIVG01023975001' => 'vvi', 'GSVIVG01034490001' => 'vvi', 'HanXRQChr04g0112071' => 'han', 'HanXRQChr05g0131151' => 'han', 'HanXRQChr09g0262371' => 'han', 'HanXRQChr09g0268401' => 'han', 'HanXRQChr10g0279241' => 'han', 'HanXRQChr10g0297961' => 'han', 'HanXRQChr11g0326231' => 'han', 'HanXRQChr11g0328471' => 'han', 'HanXRQChr16g0507941' => 'han', 'HanXRQChr17g0560211' => 'han', 'Haze_02108' => 'cav', 'Haze_02428' => 'cav', 'Haze_05593' => 'cav', 'Haze_06448' => 'cav', 'Haze_09427' => 'cav', 'Haze_12022' => 'cav', 'Haze_17612' => 'cav', 'Haze_17928' => 'cav', 'Hma1.2p1_0032F.1_g019250' => 'hma', 'Hma1.2p1_0163F.1_g072690' => 'hma', 'Hma1.2p1_0265F.1_g106710' => 'hma', 'Hma1.2p1_0286F.1_g113970' => 'hma', 'Hma1.2p1_0363F.1_g136640' => 'hma', 'Hma1.2p1_0584F.1_g183470' => 'hma', 'Hma1.2p1_0885F.1_g232570' => 'hma', 'HPP92_006022' => 'vpl', 'HPP92_007320' => 'vpl', 'HPP92_011521' => 'vpl', 'HPP92_019387' => 'vpl', 'HPP92_024038' => 'vpl', 'Hund05891' => 'sun', 'Hund06450' => 'sun', 'Hund12053' => 'sun', 'Hund16800' => 'sun', 'Hund21222' => 'sun', 'Hund22896' => 'sun', 'Hund23746' => 'sun', 'Hund27083' => 'sun', 'Lalb_Chr02g0141831' => 'lal', 'Lalb_Chr02g0141841' => 'lal', 'Lalb_Chr05g0220411' => 'lal', 'Lalb_Chr06g0162081' => 'lal', 'Lalb_Chr09g0327651' => 'lal', 'Lalb_Chr13g0295051' => 'lal', 'Lalb_Chr15g0086801' => 'lal', 'Lalb_Chr16g0383781' => 'lal', 'Lalb_Chr16g0383791' => 'lal', 'Lalb_Chr18g0055441' => 'lal', 'Lalb_Chr18g0059611' => 'lal', 'Lalb_Chr20g0109661' => 'lal', 'Lalb_Chr20g0109831' => 'lal', 'Lalb_Chr20g0121871' => 'lal', 'Lalb_Chr22g0355361' => 'lal', 'Lalb_Chr25g0286371' => 'lal', 'Lj1A1187G43' => 'lonja', 'Lj1A1205T50' => 'lonja', 'Lj1A800G33' => 'lonja', 'Lj1C1187T7' => 'lonja', 'Lj1C843T11' => 'lonja', 'Lj1g0010940' => 'lja', 'Lj2A288T69' => 'lonja', 'Lj3g0024276' => 'lja', 'Lj4A47T76' => 'lonja', 'Lj4g0005805' => 'lja', 'Lj4g0006097' => 'lja', 'Lj4g0008528' => 'lja', 'Lj4g0024907' => 'lja', 'Lj5g0012472' => 'lja', 'Lj5g0018648' => 'lja', 'Lj6C789G1' => 'lonja', 'Lj6g0004000' => 'lja', 'Lj7A292G67' => 'lonja', 'Lj7A292T64' => 'lonja', 'Lj9A400T58' => 'lonja', 'Lsat_1_v5_gn_1_126181' => 'lsa', 'Lsat_1_v5_gn_4_123041' => 'lsa', 'Lsat_1_v5_gn_4_133620' => 'lsa', 'Lsat_1_v5_gn_4_53221' => 'lsa', 'Lsat_1_v5_gn_4_71961' => 'lsa', 'Lsat_1_v5_gn_7_105241' => 'lsa', 'Lsat_1_v5_gn_7_21361' => 'lsa', 'Lsat_1_v5_gn_7_28860' => 'lsa', 'Lsat_1_v5_gn_7_31260' => 'lsa', 'Lsat_1_v5_gn_8_52801' => 'lsa', 'Manes.02G191400' => 'mes', 'Manes.03G110100' => 'mes', 'Manes.04G071100' => 'mes', 'Manes.05G100500' => 'mes', 'Manes.05G164700' => 'mes', 'Manes.15G087000' => 'mes', 'Manes.15G121500' => 'mes', 'Manes.16G028300' => 'mes', 'Manes.17G046100' => 'mes', 'Manes.17G069800' => 'mes', 'Manes.18G100500' => 'mes', 'Mapoly0002s0109' => 'mpo', 'Mapoly0024s0007' => 'mpo', 'Mapoly0089s0032' => 'mpo', 'MBI04_g42241_MAGBIO' => 'mbi', 'MBI05_g11988_MAGBIO' => 'mbi', 'MBI05_g35452_MAGBIO' => 'mbi', 'MBI07_g30179_MAGBIO' => 'mbi', 'MBI07_g35859_MAGBIO' => 'mbi', 'MBI07_g35860_MAGBIO' => 'mbi', 'MBI07_g37166_MAGBIO' => 'mbi', 'MBI08_g18172_MAGBIO' => 'mbi', 'MBI09_g08441_MAGBIO' => 'mbi', 'MBI13_g01676_MAGBIO' => 'mbi', 'MBI14_g42955_MAGBIO' => 'mbi', 'MBI16_g13161_MAGBIO' => 'mbi', 'MBI17_g27204_MAGBIO' => 'mbi', 'MBI19_g21595_MAGBIO' => 'mbi', 'MD00G1148400' => 'mdo', 'MD02G1301200' => 'mdo', 'MD03G1227800' => 'mdo', 'MD05G1041100' => 'mdo', 'MD05G1124800' => 'mdo', 'MD05G1284000' => 'mdo', 'MD05G1338800' => 'mdo', 'MD05G1338900' => 'mdo', 'MD07G1022800' => 'mdo', 'MD10G1047500' => 'mdo', 'MD10G1127500' => 'mdo', 'MD10G1262300' => 'mdo', 'MD10G1293800' => 'mdo', 'MD16G1074300' => 'mdo', 'Medtr1g021670' => 'mtr', 'Medtr1g096320' => 'mtr', 'Medtr2g013690' => 'mtr', 'Medtr2g019450' => 'mtr', 'Medtr2g085170' => 'mtr', 'Medtr4g088785' => 'mtr', 'Medtr8g055930' => 'mtr', 'Medtr8g085850' => 'mtr', 'MELO3C002605.2' => 'cme', 'MELO3C003891.2' => 'cme', 'MELO3C004012.2' => 'cme', 'MELO3C007134.2' => 'cme', 'MELO3C008118.2' => 'cme', 'MELO3C016700.2' => 'cme', 'MELO3C024127.2' => 'cme', 'MELO3C033361.2' => 'cme', 'MELO3C033362.2' => 'cme', 'Migut.C00430' => 'egut', 'Migut.C01246' => 'egut', 'Migut.E00101' => 'egut', 'Migut.H01486' => 'egut', 'Migut.H01939' => 'egut', 'Migut.K00360' => 'egut', 'Migut.M00910' => 'egut', 'Migut.M01139' => 'egut', 'Migut.N02677' => 'egut', 'MSTRG.13252' => 'ama', 'MSTRG.14701' => 'ama', 'MSTRG.1521' => 'ama', 'MSTRG.15884' => 'ama', 'MSTRG.16242' => 'ama', 'MSTRG.22285' => 'ama', 'MSTRG.22444' => 'ama', 'MSTRG.2349' => 'ama', 'MSTRG.26308' => 'ama', 'MSTRG.28296' => 'ama', 'MSTRG.9895' => 'ama', 'Nitab4.5_0000110g0060' => 'nta', 'Nitab4.5_0000420g0130' => 'nta', 'Nitab4.5_0000422g0030' => 'nta', 'Nitab4.5_0000560g0180' => 'nta', 'Nitab4.5_0000703g0100' => 'nta', 'Nitab4.5_0000786g0200' => 'nta', 'Nitab4.5_0001336g0020' => 'nta', 'Nitab4.5_0001796g0030' => 'nta', 'Nitab4.5_0003348g0060' => 'nta', 'Nitab4.5_0003698g0040' => 'nta', 'Nitab4.5_0003942g0090' => 'nta', 'Nitab4.5_0004775g0070' => 'nta', 'Nitab4.5_0004864g0030' => 'nta', 'Nitab4.5_0005615g0020' => 'nta', 'Nitab4.5_0009288g0030' => 'nta', 'Nitab4.5_0009341g0010' => 'nta', 'Nitab4.5_0009535g0010' => 'nta', 'Nn1g03995' => 'nnu', 'Nn1g04100' => 'nnu', 'Nn1g06530' => 'nnu', 'Nn3g16404' => 'nnu', 'Nn3g17212' => 'nnu', 'Nn3g20776' => 'nnu', 'Nn3g21923' => 'nnu', 'Nn5g27737' => 'nnu', 'Nn5g29461' => 'nnu', 'Nn7g38355' => 'nnu', 'Nn8g39873' => 'nnu', 'Oeu000548.2' => 'oeu', 'Oeu004672.1' => 'oeu', 'Oeu015605.2' => 'oeu', 'Oeu016092.1' => 'oeu', 'Oeu017879.3' => 'oeu', 'Oeu024910.1' => 'oeu', 'Oeu028965.1' => 'oeu', 'Oeu031269.1' => 'oeu', 'Oeu031270.1' => 'oeu', 'Oeu032535.1' => 'oeu', 'Oeu034151.1' => 'oeu', 'Oeu034152.1' => 'oeu', 'Oeu034588.2' => 'oeu', 'Oeu050846.1' => 'oeu', 'Oeu050849.2' => 'oeu', 'Oeu051063.2' => 'oeu', 'Oeu052368.1' => 'oeu', 'Oeu052370.1' => 'oeu', 'Os01g0210400' => 'osa', 'Os01g0304300' => 'osa', 'Os01g0749100' => 'osa', 'Os02g0745800' => 'osa', 'Os03g0769050' => 'osa', 'Os05g0531500' => 'osa', 'Os06g0724300' => 'osa', 'Os11g0198100' => 'osa', 'Peaxi162Scf00069g01425' => 'pax', 'Peaxi162Scf00280g00811' => 'pax', 'Peaxi162Scf00310g00615' => 'pax', 'Peaxi162Scf00362g00542' => 'pax', 'Peaxi162Scf00461g00310' => 'pax', 'Peaxi162Scf00530g00118' => 'pax', 'Peaxi162Scf00541g00057' => 'pax', 'Peaxi162Scf00661g00017' => 'pax', 'Peaxi162Scf00926g00027' => 'pax', 'Peaxi162Scf01064g00263' => 'pax', 'Peaxi162Scf01211g00135' => 'pax', 'PGR004G2336' => 'pgr', 'PGR042G0327' => 'pgr', 'PGR042G1957' => 'pgr', 'PGR042G2003' => 'pgr', 'PGR042G3929' => 'pgr', 'PGR083G1137' => 'pgr', 'PGR083G1364' => 'pgr', 'PGSC0003DMG400003381' => 'stu', 'PGSC0003DMG400003417' => 'stu', 'PGSC0003DMG400008981' => 'stu', 'PGSC0003DMG400012417' => 'stu', 'PGSC0003DMG400012823' => 'stu', 'PGSC0003DMG400016885' => 'stu', 'PGSC0003DMG400022812' => 'stu', 'PGSC0003DMG400029726' => 'stu', 'PGSC0003DMG401009243' => 'stu', 'PGSC0003DMG401031505' => 'stu', 'PGSC0003DMG402031505' => 'stu', 'Phvul.001G017600' => 'pvu', 'Phvul.002G193500' => 'pvu', 'Phvul.002G228900' => 'pvu', 'Phvul.002G236800' => 'pvu', 'Phvul.003G049500' => 'pvu', 'Phvul.005G072000' => 'pvu', 'Phvul.006G164800' => 'pvu', 'Phvul.006G185100' => 'pvu', 'Phvul.007G090000' => 'pvu', 'Potri.001G399800' => 'ptr', 'Potri.002G149900' => 'ptr', 'Potri.004G044100' => 'ptr', 'Potri.004G177600' => 'ptr', 'Potri.009G138000' => 'ptr', 'Potri.010G094000' => 'ptr', 'Potri.011G053000' => 'ptr', 'Potri.011G119300' => 'ptr', 'Potri.013G113700' => 'ptr', 'Potri.018G107800' => 'ptr', 'Potri.019G084100' => 'ptr', 'Pp3c14_23720' => 'ppa', 'Pp3c16_6340' => 'ppa', 'Pp3c23_13420' => 'ppa', 'Pp3c24_2740' => 'ppa', 'Pp3c25_860' => 'ppa', 'Pp3c8_21750' => 'ppa', 'Prupe.1G273000' => 'ppe', 'Prupe.1G273700' => 'ppe', 'Prupe.1G274100' => 'ppe', 'Prupe.2G023300' => 'ppe', 'Prupe.4G048000' => 'ppe', 'Prupe.4G080400' => 'ppe', 'Prupe.4G181200' => 'ppe', 'Prupe.8G056900' => 'ppe', 'Prupe.8G168700' => 'ppe', 'Psat1g189080' => 'psa', 'Psat1g204760' => 'psa', 'Psat4g175560' => 'psa', 'Psat4g177720' => 'psa', 'Psat5g244240' => 'psa', 'Psat6g010720' => 'psa', 'Psat6g187200' => 'psa', 'Psat7g072040' => 'psa', 'PSO017G3501' => 'pso', 'PSO063G2148' => 'pso', 'PSO063G5608' => 'pso', 'PSO210G6392' => 'pso', 'PSO541G2319' => 'pso', 'PSO541G2836' => 'pso', 'PSO541G4012' => 'pso', 'PSO541G6253' => 'pso', 'PSO675G0580' => 'pso', 'PSO675G0856' => 'pso', 'PSO675G5635' => 'pso', 'PSO675G9157' => 'pso', 'PSO832G1660' => 'pso', 'PSO832G1969' => 'pso', 'QL02p007186' => 'qlo', 'QL02p033904' => 'qlo', 'QL03p064391' => 'qlo', 'QL05p040593' => 'qlo', 'QL05p058242' => 'qlo', 'QL08p021825' => 'qlo', 'QL11p004981' => 'qlo', 'RcHm_v2.0_Chr1g0318301' => 'rch', 'RcHm_v2.0_Chr4g0418501' => 'rch', 'RcHm_v2.0_Chr4g0439971' => 'rch', 'RcHm_v2.0_Chr5g0008541' => 'rch', 'RcHm_v2.0_Chr5g0014101' => 'rch', 'RcHm_v2.0_Chr5g0014131' => 'rch', 'RcHm_v2.0_Chr5g0033621' => 'rch', 'RcHm_v2.0_Chr6g0272041' => 'rch', 'RcHm_v2.0_Chr6g0278831' => 'rch', 'Rhsim02G0130400' => 'rsi', 'Rhsim02G0171100' => 'rsi', 'Rhsim05G0053000' => 'rsi', 'Rhsim05G0053100' => 'rsi', 'Rhsim06G0096500' => 'rsi', 'Rhsim06G0096600' => 'rsi', 'Rhsim06G0199100' => 'rsi', 'Rhsim12G0062300' => 'rsi', 'Rhsim12G0062800' => 'rsi', 'Sabra02G0118600' => 'sbr', 'Sabra04G0027300' => 'sbr', 'Sabra04G0119500' => 'sbr', 'Sabra08G0112500' => 'sbr', 'Sabra11G0036800' => 'sbr', 'Sabra11G0103800' => 'sbr', 'Sabra13G0096300' => 'sbr', 'Sabra16G0262300' => 'sbr', 'Sabra18G0091700' => 'sbr', 'Sabra19G0095400' => 'sbr', 'SalBow6G3080' => 'sbo', 'SalBow7G1157' => 'sbo', 'SalBow7G2123' => 'sbo', 'SalBow7G2285' => 'sbo', 'SalBow7G3537' => 'sbo', 'SalBow8G2947' => 'sbo', 'SalBow8G4463' => 'sbo', 'SalBow8G5466' => 'sbo', 'Sc01g0001750' => 'sci', 'Sc02g0006640' => 'sci', 'Sc02g0006670' => 'sci', 'Sc04g0008220' => 'sci', 'Sc05g0006190' => 'sci', 'Sc08g0002760' => 'sci', 'Sc17g0006170' => 'sci', 'Sc22g0002050' => 'sci', 'Sc23g0001190' => 'sci', 'Sc24g0000980' => 'sci', 'Sed0006245' => 'sed', 'Sed0007543' => 'sed', 'Sed0009411' => 'sed', 'Sed0010765' => 'sed', 'Sed0012944' => 'sed', 'Sed0014682' => 'sed', 'Sed0016174' => 'sed', 'Sed0016796' => 'sed', 'Sed0020317' => 'sed', 'Sed0021467' => 'sed', 'SEGI_01316' => 'sgi', 'SEGI_03374' => 'sgi', 'SEGI_16265' => 'sgi', 'SEGI_18569' => 'sgi', 'SEGI_20351' => 'sgi', 'SEGI_26395' => 'sgi', 'SEGI_29469' => 'sgi', 'SEGI_34771' => 'sgi', 'SEGI_36769' => 'sgi', 'SEGI_37139' => 'sgi', 'SGA_v2.0_scaffold100G29687' => 'sas', 'SGA_v2.0_scaffold118G32472' => 'sas', 'SGA_v2.0_scaffold14G07051' => 'sas', 'SGA_v2.0_scaffold183G39845' => 'sas', 'SGA_v2.0_scaffold1G00174' => 'sas', 'SGA_v2.0_scaffold22G09714' => 'sas', 'SGA_v2.0_scaffold333G48992' => 'sas', 'SGA_v2.0_scaffold46G17491' => 'sas', 'SGA_v2.0_scaffold49G18294' => 'sas', 'SGA_v2.0_scaffold63G21658' => 'sas', 'SHI01741' => 'shi', 'SHI05771' => 'shi', 'SHI18077' => 'shi', 'SHI20525' => 'shi', 'SHI20527' => 'shi', 'SHI20528' => 'shi', 'SMO172G0185' => 'smo', 'SMO198G0020' => 'smo', 'SMO351G0006' => 'smo', 'SMO356G0118' => 'smo', 'SMO358G0296' => 'smo', 'SMO367G0079' => 'smo', 'SMO367G1277' => 'smo', 'Solyc01g014220.3' => 'sly', 'Solyc01g111770.2' => 'sly', 'Solyc02g078180.3' => 'sly', 'Solyc03g006430.3' => 'sly', 'Solyc03g006456.1' => 'sly', 'Solyc03g079860.2' => 'sly', 'Solyc04g079770.3' => 'sly', 'Solyc05g007430.4' => 'sly', 'Solyc07g063150.3' => 'sly', 'Solyc08g016620.3' => 'sly', 'Solyc09g057590.3' => 'sly', 'Solyc09g057600.1' => 'sly', 'Solyc10g009050.3' => 'sly', 'Solyc11g017420.2' => 'sly', 'Sopen01g053810' => 'spe', 'Sopen02g023040' => 'spe', 'Sopen03g002440' => 'spe', 'Sopen04g033350' => 'spe', 'Sopen05g003310' => 'spe', 'Sopen07g004050' => 'spe', 'Sopen07g031340' => 'spe', 'Sopen08g006990' => 'spe', 'Sopen10g004830' => 'spe', 'Sopen11g009370' => 'spe', 'Sp1g24450' => 'spa', 'Sp1g29670' => 'spa', 'Sp1g39600' => 'spa', 'Sp2g11080' => 'spa', 'Sp2g13970' => 'spa', 'Sp4g16130' => 'spa', 'Sp6g13080' => 'spa', 'Sp7g37270' => 'spa', 'TAR371G0065' => 'tar', 'TAR376G0340' => 'tar', 'TAR376G0435' => 'tar', 'TAR381G0002' => 'tar', 'TAR381G1236' => 'tar', 'TAR624G0055' => 'tar', 'TAR624G0324' => 'tar', 'TAR624G0696' => 'tar', 'TAR624G0906' => 'tar', 'TAR625G0107' => 'tar', 'TAR626G0015' => 'tar', 'TAR626G1356' => 'tar', 'TAR627G0888' => 'tar', 'TAR628G0399' => 'tar', 'TAR628G1327' => 'tar', 'TAR629G2831' => 'tar', 'TAR629G2874' => 'tar', 'TAR633G1432' => 'tar', 'TAR633G2771' => 'tar', 'THA.LOC104803394' => 'tha', 'THA.LOC104805153' => 'tha', 'THA.LOC104806784' => 'tha', 'THA.LOC104810473' => 'tha', 'THA.LOC104813100' => 'tha', 'THA.LOC104814215' => 'tha', 'THA.LOC104815554' => 'tha', 'THA.LOC104820544' => 'tha', 'THA.LOC104824754' => 'tha', 'THA.LOC104827717' => 'tha', 'Thecc.02G031400' => 'tca', 'Thecc.02G055900' => 'tca', 'Thecc.02G350800' => 'tca', 'Thecc.06G150900' => 'tca', 'Thecc.06G186600' => 'tca', 'Thecc.07G089600' => 'tca', 'Thecc.08G020400' => 'tca', 'Thecc.08G182100' => 'tca', 'Thhalv10000873m.g' => 'esa', 'Thhalv10004185m.g' => 'esa', 'Thhalv10006981m.g' => 'esa', 'Thhalv10007204m.g' => 'esa', 'Thhalv10011374m.g' => 'esa', 'Thhalv10013482m.g' => 'esa', 'Thhalv10017801m.g' => 'esa', 'Thhalv10024983m.g' => 'esa', 'TPR.G12072' => 'tpr', 'TPR.G15769' => 'tpr', 'TPR.G16504' => 'tpr', 'TPR.G16506' => 'tpr', 'TPR.G24345' => 'tpr', 'TPR.G26666' => 'tpr', 'TPR.G27320' => 'tpr', 'TPR.G31819' => 'tpr', 'TPR.G38879' => 'tpr', 'TPR.G39015' => 'tpr', 'TPR.G8819' => 'tpr', 'TWI09G0924' => 'twi', 'TWI12G0811' => 'twi', 'TWI12G1294' => 'twi', 'TWI31G0150' => 'twi', 'TWI36G1262' => 'twi', 'TWI38G1287' => 'twi', 'TWI38G1633' => 'twi', 'TWI38G1982' => 'twi', 'TWI39G0116' => 'twi', 'TWI60G1011' => 'twi', 'TWI63G0171' => 'twi', 'TWI73G0839' => 'twi', 'TWI79G1511' => 'twi', 'unitig_0.g915' => 'ugi', 'unitig_0.g916' => 'ugi', 'unitig_21.g20219' => 'ugi', 'unitig_21.g20416' => 'ugi', 'unitig_578.g16132' => 'ugi', 'unitig_578.g16718' => 'ugi', 'unitig_62.g23481' => 'ugi', 'unitig_744.g24535' => 'ugi', 'unitig_749.g13525' => 'ugi', 'vmacro01248' => 'vma', 'vmacro02290' => 'vma', 'vmacro10946' => 'vma', 'vmacro11865' => 'vma', 'vmacro12493' => 'vma', 'vmacro17322' => 'vma', 'vmacro21599' => 'vma', 'vmacro23041' => 'vma', 'VMungo0251G0004' => 'vmu', 'VMungo0251G2639' => 'vmu', 'VMungo0251G2967' => 'vmu', 'VMungo0540G0864' => 'vmu', 'VMungo0540G1569' => 'vmu', 'VMungo0647G0317' => 'vmu', 'VMungo0720G1373' => 'vmu', 'VMungo0720G1508' => 'vmu', 'VMungo1080G0485' => 'vmu', 'VMungo1215G3177' => 'vmu', 'Zm00001eb112600' => 'zma', 'Zm00001eb120220' => 'zma', 'Zm00001eb153240' => 'zma', 'Zm00001eb168880' => 'zma', 'Zm00001eb213920' => 'zma', 'Zm00001eb228280' => 'zma', 'Zm00001eb254580' => 'zma', 'Zm00001eb272180' => 'zma', 'Zm00001eb293190' => 'zma', 'Zm00001eb322930' => 'zma', 'Zm00001eb353360' => 'zma', 'Zm00001eb353390' => 'zma', 'Zm00001eb353430' => 'zma', 'Zm00001eb353440' => 'zma', 'Zm00001eb353780' => 'zma' ), 'gf_id' => 'HOM05D000499', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000499' ), 'data_identifier' => 'HOM05D000499', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000499', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1066', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p29780' => 'bna', 'A02p33180' => 'bna', 'A03p16470' => 'bna', 'A03p66010' => 'bna', 'A04p25970' => 'bna', 'A06p01270' => 'bna', 'A06p46080' => 'bna', 'A07p11400' => 'bna', 'A08p01840' => 'bna', 'A08p08230' => 'bna', 'A08p25740' => 'bna', 'A09p32070' => 'bna', 'A09p37830' => 'bna', 'A09p42840' => 'bna', 'A09p42850' => 'bna', 'Aa31LG10G2060' => 'aar', 'Aa31LG2G7410' => 'aar', 'Aa31LG6G10200' => 'aar', 'Aa31LG6G16680' => 'aar', 'Aa31LG6G8470' => 'aar', 'Aa31LG9G12730' => 'aar', 'Aa31LG9G13680' => 'aar', 'Aa31LG9G14920' => 'aar', 'Aa31LG9G6650' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4977' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5467' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3254' => 'aag', 'Actinidia02578' => 'ach', 'Actinidia07693' => 'ach', 'Actinidia08413' => 'ach', 'Actinidia08414' => 'ach', 'Actinidia15289' => 'ach', 'Actinidia19871' => 'ach', 'Actinidia21475' => 'ach', 'Actinidia22576' => 'ach', 'Actinidia28327' => 'ach', 'Actinidia32491' => 'ach', 'Actinidia39463' => 'ach', 'Actinidia39571' => 'ach', 'Ah.01g013750' => 'amhyb', 'Ah.01g023210' => 'amhyb', 'Ah.04g164850' => 'amhyb', 'Ah.05g178060' => 'amhyb', 'Ah.07g204270' => 'amhyb', 'Ah.07g208480' => 'amhyb', 'Ah.09g237410' => 'amhyb', 'Ah.14g089460' => 'amhyb', 'AL1G41790' => 'aly', 'AL1G49050' => 'aly', 'AL1G53810' => 'aly', 'AL1G61400' => 'aly', 'AL4G18580' => 'aly', 'AL5G12510' => 'aly', 'AL5G12540' => 'aly', 'AL6G43230' => 'aly', 'AL7G10370' => 'aly', 'AL7G19250' => 'aly', 'AL8G12240' => 'aly', 'AL8G18540' => 'aly', 'Aqoxy1G02409' => 'aox', 'Aqoxy2G03993' => 'aox', 'Aqoxy3G03357' => 'aox', 'Aqoxy4G00785' => 'aox', 'Aqoxy5G02598' => 'aox', 'Aqoxy6G00132' => 'aox', 'Aqoxy7G01776' => 'aox', 'Aqoxy7G02316' => 'aox', 'Aqoxy7G03973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.12AFKW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B8730' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27IQR1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3F75VG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3RE0GA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41TCQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.527VTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FIR39' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5W8UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DA38EV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ63HS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H1I32C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HC27T5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4M8AP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7N3CZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9UVDZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LS1NQA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT1D4B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SKC4TM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCFV76' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF9Q1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQWD9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1ZM88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WE07RT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YCK7VH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJE6Q6' => 'arhy', 'AT1G28240' => 'ath', 'AT1G34550' => 'ath', 'AT1G53040' => 'ath', 'AT2G02910' => 'ath', 'AT4G09630' => 'ath', 'AT4G38500' => 'ath', 'AT5G42660' => 'ath', 'AT5G46220' => 'ath', 'ATR0152G026' => 'atr', 'ATR0564G343' => 'atr', 'ATR0706G151' => 'atr', 'ATR0733G207' => 'atr', 'ATR0751G234' => 'atr', 'ATR0807G048' => 'atr', 'ATR1091G084' => 'atr', 'Atru.chr10.1229' => 'acertr', 'Atru.chr10.1230' => 'acertr', 'Atru.chr10.1874' => 'acertr', 'Atru.chr11.1808' => 'acertr', 'Atru.chr13.1795' => 'acertr', 'Atru.chr13.570' => 'acertr', 'Atru.chr2.2608' => 'acertr', 'Atru.chr2.2609' => 'acertr', 'Atru.chr5.3428' => 'acertr', 'Atru.chr8.1171' => 'acertr', 'AUR62004651' => 'cqu', 'AUR62008675' => 'cqu', 'AUR62010014' => 'cqu', 'AUR62013004' => 'cqu', 'AUR62014825' => 'cqu', 'AUR62015015' => 'cqu', 'AUR62015151' => 'cqu', 'AUR62017020' => 'cqu', 'AUR62019422' => 'cqu', 'AUR62023570' => 'cqu', 'AUR62025571' => 'cqu', 'AUR62029098' => 'cqu', 'AUR62033863' => 'cqu', 'AUR62034296' => 'cqu', 'AUR62040075' => 'cqu', 'BcaB02g07334' => 'bca', 'BcaB02g10575' => 'bca', 'BcaB03g12119' => 'bca', 'BcaB03g12120' => 'bca', 'BcaB03g13945' => 'bca', 'BcaB04g17123' => 'bca', 'BcaB04g17867' => 'bca', 'BcaB04g19839' => 'bca', 'BcaB07g30317' => 'bca', 'BcaB07g32432' => 'bca', 'BcaB07g33362' => 'bca', 'BcaB08g36611' => 'bca', 'BcaC01g00028' => 'bca', 'BcaC01g01356' => 'bca', 'BcaC01g02034' => 'bca', 'BcaC01g06051' => 'bca', 'BcaC03g16839' => 'bca', 'BcaC03g17176' => 'bca', 'BcaC05g26829' => 'bca', 'BcaC06g31490' => 'bca', 'BcaC06g35344' => 'bca', 'BcaC06g36570' => 'bca', 'BcaC07g37537' => 'bca', 'BcaC08g43491' => 'bca', 'BcaC08g43773' => 'bca', 'BcaNung00234' => 'bca', 'BcaNung01982' => 'bca', 'BcaNung03707' => 'bca', 'BcaNung06454' => 'bca', 'BolC2t10762H' => 'bol', 'BolC2t11191H' => 'bol', 'BolC3t14322H' => 'bol', 'BolC3t19747H' => 'bol', 'BolC3t21425H' => 'bol', 'BolC4t27800H' => 'bol', 'BolC5t31423H' => 'bol', 'BolC6t35951H' => 'bol', 'BolC6t36282H' => 'bol', 'BolC7t40678H' => 'bol', 'BolC7t40679H' => 'bol', 'BolC7t42222H' => 'bol', 'BolC7t43492H' => 'bol', 'BolC7t46785H' => 'bol', 'BolC8t47853H' => 'bol', 'BolC9t56805H' => 'bol', 'BraA02t08000Z' => 'bra', 'BraA02t08341Z' => 'bra', 'BraA03t10936Z' => 'bra', 'BraA03t15657Z' => 'bra', 'BraA04t18100Z' => 'bra', 'BraA05t20523Z' => 'bra', 'BraA06t23353Z' => 'bra', 'BraA06t27473Z' => 'bra', 'BraA06t27769Z' => 'bra', 'BraA07t28928Z' => 'bra', 'BraA08t32236Z' => 'bra', 'BraA08t32841Z' => 'bra', 'BraA08t34524Z' => 'bra', 'BraA09t38742Z' => 'bra', 'BraA09t39295Z' => 'bra', 'C02p47180' => 'bna', 'C02p50990' => 'bna', 'C03p19360' => 'bna', 'C03p74950' => 'bna', 'C03p91000' => 'bna', 'C04p63260' => 'bna', 'C05p27050' => 'bna', 'C06p08750' => 'bna', 'C06p11490' => 'bna', 'C07p02820' => 'bna', 'C07p17180' => 'bna', 'C07p29440' => 'bna', 'C07p63730' => 'bna', 'C09p39260' => 'bna', 'CAN.G1164.34' => 'can', 'CAN.G1164.39' => 'can', 'CAN.G1530.3' => 'can', 'CAN.G162.61' => 'can', 'CAN.G176.6' => 'can', 'CAN.G289.49' => 'can', 'CAN.G370.21' => 'can', 'CAN.G370.22' => 'can', 'CAN.G371.117' => 'can', 'CAN.G58.37' => 'can', 'CAN.G588.98' => 'can', 'CANSAT21G2266' => 'cansat', 'CANSAT25G2799' => 'cansat', 'CANSAT35G0862' => 'cansat', 'CANSAT35G1704' => 'cansat', 'CANSAT35G1760' => 'cansat', 'CANSAT56G3971' => 'cansat', 'CANSAT56G4116' => 'cansat', 'CANSAT80G1259' => 'cansat', 'CARHR027730' => 'chi', 'CARHR033880' => 'chi', 'CARHR043270' => 'chi', 'CARHR145330' => 'chi', 'CARHR145340' => 'chi', 'CARHR175570' => 'chi', 'CARHR181570' => 'chi', 'CARHR258470' => 'chi', 'CARHR260490' => 'chi', 'CARHR294220' => 'chi', 'Carub.0001s2668' => 'cru', 'Carub.0001s3257' => 'cru', 'Carub.0001s4220' => 'cru', 'Carub.0005s0179' => 'cru', 'Carub.0006s2807' => 'cru', 'Carub.0007s0039' => 'cru', 'Carub.0008s0169' => 'cru', 'Carub.0008s0636' => 'cru', 'Ca_00338_v3' => 'car', 'Ca_00542_v3' => 'car', 'Ca_01844_v3' => 'car', 'Ca_10611_v3' => 'car', 'Ca_13326_v3' => 'car', 'Ca_17944_v3' => 'car', 'Ca_18546_v3' => 'car', 'Ca_24219_v3' => 'car', 'Ca_29972_v3' => 'car', 'CBR_g3681' => 'cbr', 'CBR_g40021' => 'cbr', 'Cc01_g08140' => 'ccan', 'Cc02_g13410' => 'ccan', 'Cc02_g37480' => 'ccan', 'Cc05_g12030' => 'ccan', 'Cc09_g03370' => 'ccan', 'Cc09_g10300' => 'ccan', 'Cc10_g03530' => 'ccan', 'Cc10_g11380' => 'ccan', 'CDE01G0176' => 'cde', 'CDE02G0675' => 'cde', 'CDE02G0942' => 'cde', 'CDE02G1153' => 'cde', 'CDE02G4177' => 'cde', 'CDE04G2117' => 'cde', 'CDE04G2736' => 'cde', 'CDE08G1161' => 'cde', 'CDE09G1238' => 'cde', 'Cfa000467' => 'cfa', 'Cfa000947' => 'cfa', 'Cfa004969' => 'cfa', 'Cfa005284' => 'cfa', 'Cfa008993' => 'cfa', 'Cfa018187' => 'cfa', 'Cfa018454' => 'cfa', 'Cfa020585' => 'cfa', 'Ciclev10000424m.g' => 'ccl', 'Ciclev10003605m.g' => 'ccl', 'Ciclev10007828m.g' => 'ccl', 'Ciclev10014620m.g' => 'ccl', 'Ciclev10015169m.g' => 'ccl', 'Ciclev10018291m.g' => 'ccl', 'Ciclev10028256m.g' => 'ccl', 'Ciclev10033822m.g' => 'ccl', 'CiPaw.05G060300' => 'cil', 'CiPaw.05G085000' => 'cil', 'CiPaw.06G083700' => 'cil', 'CiPaw.06G120300' => 'cil', 'CiPaw.09G060500' => 'cil', 'CiPaw.09G123800' => 'cil', 'CiPaw.11G169700' => 'cil', 'CiPaw.12G118300' => 'cil', 'CiPaw.15G071000' => 'cil', 'CiPaw.15G081900' => 'cil', 'ClCG01G024610' => 'cla', 'ClCG03G006070' => 'cla', 'ClCG05G019250' => 'cla', 'ClCG09G009500' => 'cla', 'ClCG11G008200' => 'cla', 'ClCG11G018080' => 'cla', 'COL.COLO4_17373' => 'col', 'COL.COLO4_22994' => 'col', 'COL.COLO4_26389' => 'col', 'COL.COLO4_27170' => 'col', 'COL.COLO4_31074' => 'col', 'COL.COLO4_31465' => 'col', 'COL.COLO4_36438' => 'col', 'COL.COLO4_36439' => 'col', 'Cpa.g.c38781' => 'cpa', 'Cpa.g.sc128.12' => 'cpa', 'Cpa.g.sc166.7' => 'cpa', 'Cpa.g.sc166.8' => 'cpa', 'Cpa.g.sc20.111' => 'cpa', 'Cpa.g.sc27.31' => 'cpa', 'Cpa.g.sc64.36' => 'cpa', 'Cpa.g.sc64.37' => 'cpa', 'Cpa.g.sc66.49' => 'cpa', 'Cpa.g.sc80.64' => 'cpa', 'CsaV3_1G012320' => 'csa', 'CsaV3_2G008480' => 'csa', 'CsaV3_2G033450' => 'csa', 'CsaV3_3G044830' => 'csa', 'CsaV3_4G033710' => 'csa', 'CsaV3_6G051730' => 'csa', 'CsaV3_7G025350' => 'csa', 'CSS0001067' => 'camsi', 'CSS0005996' => 'camsi', 'CSS0006590' => 'camsi', 'CSS0009673' => 'camsi', 'CSS0010201' => 'camsi', 'CSS0010549' => 'camsi', 'CSS0011364' => 'camsi', 'CSS0014473' => 'camsi', 'CSS0014961' => 'camsi', 'CSS0020191' => 'camsi', 'CSS0021165' => 'camsi', 'CSS0022306' => 'camsi', 'CSS0030591' => 'camsi', 'CSS0030696' => 'camsi', 'CSS0032653' => 'camsi', 'CSS0037487' => 'camsi', 'CSS0041102' => 'camsi', 'CSS0041261' => 'camsi', 'CSS0046246' => 'camsi', 'CSS0049256' => 'camsi', 'DCAR_004075' => 'dca', 'DCAR_011538' => 'dca', 'DCAR_019553' => 'dca', 'DCAR_020952' => 'dca', 'DCAR_021739' => 'dca', 'DCAR_027407' => 'dca', 'DCAR_027913' => 'dca', 'DCAR_028066' => 'dca', 'Dinv05899' => 'din', 'Dinv07563' => 'din', 'Dinv08010' => 'din', 'Dinv14125' => 'din', 'Dinv20172' => 'din', 'Dinv30743' => 'din', 'Dinv31229' => 'din', 'Dinv34162' => 'din', 'Dinv36028' => 'din', 'Dinv39368' => 'din', 'Dinv40565' => 'din', 'Dinv41706' => 'din', 'Duzib052G0089' => 'dzi', 'Duzib116G0641' => 'dzi', 'Duzib132G0069' => 'dzi', 'Duzib132G1219' => 'dzi', 'Duzib147G0278' => 'dzi', 'Duzib160G0480' => 'dzi', 'Duzib170G0661' => 'dzi', 'Duzib177G0591' => 'dzi', 'Duzib187G1353' => 'dzi', 'Duzib192G0858' => 'dzi', 'Duzib192G0883' => 'dzi', 'Duzib213G0506' => 'dzi', 'Duzib235G0289' => 'dzi', 'Duzib251G0422' => 'dzi', 'ECA232G3898' => 'eca', 'ECA233G5950' => 'eca', 'ECA234G1699' => 'eca', 'ECA234G2421' => 'eca', 'ECA236G0426' => 'eca', 'ECA236G4331' => 'eca', 'ECA248G2573' => 'eca', 'EL10Ac1g00077' => 'bvu', 'EL10Ac1g01746' => 'bvu', 'EL10Ac2g03464' => 'bvu', 'EL10Ac4g08176' => 'bvu', 'EL10Ac7g17521' => 'bvu', 'EL10Ac8g20386' => 'bvu', 'EL10Ac9g21343' => 'bvu', 'EL10Ac9g22688' => 'bvu', 'Eucgr.B03434' => 'egr', 'Eucgr.D00618' => 'egr', 'Eucgr.E02395' => 'egr', 'Eucgr.F01129' => 'egr', 'Eucgr.F02622' => 'egr', 'Eucgr.F04207' => 'egr', 'FAN01G0570' => 'fan', 'FAN03G3351' => 'fan', 'FAN06G3702' => 'fan', 'FAN07G2149' => 'fan', 'FAN10G3758' => 'fan', 'FAN11G1170' => 'fan', 'FAN11G2050' => 'fan', 'FAN11G2724' => 'fan', 'FAN12G1700' => 'fan', 'FAN12G2028' => 'fan', 'FAN15G1160' => 'fan', 'FAN15G3063' => 'fan', 'FAN16G2540' => 'fan', 'FAN16G3077' => 'fan', 'FAN16G3624' => 'fan', 'FAN17G0221' => 'fan', 'FAN20G2492' => 'fan', 'FAN20G2905' => 'fan', 'FAN21G0548' => 'fan', 'FAN21G1300' => 'fan', 'FAN22G0077' => 'fan', 'FAN22G1315' => 'fan', 'FAN24G1280' => 'fan', 'FAN24G1445' => 'fan', 'FAN24G3527' => 'fan', 'FAN25G0464' => 'fan', 'FAN25G2885' => 'fan', 'FAN25G3270' => 'fan', 'FAN27G1101' => 'fan', 'FAN27G2846' => 'fan', 'FAN27G3524' => 'fan', 'FvH4_2g11770' => 'fve', 'FvH4_2g15630' => 'fve', 'FvH4_3g05570' => 'fve', 'FvH4_3g09110' => 'fve', 'FvH4_3g19940' => 'fve', 'FvH4_4g04821' => 'fve', 'FvH4_4g31480' => 'fve', 'FvH4_7g01740' => 'fve', 'Glyma.05G130400' => 'gma', 'Glyma.05G156400' => 'gma', 'Glyma.07G197000' => 'gma', 'Glyma.08G085151' => 'gma', 'Glyma.08G114500' => 'gma', 'Glyma.08G300400' => 'gma', 'Glyma.10G215800' => 'gma', 'Glyma.12G224400' => 'gma', 'Glyma.13G179300' => 'gma', 'Glyma.13G218151' => 'gma', 'Glyma.13G238800' => 'gma', 'Glyma.13G276900' => 'gma', 'Glyma.14G078200' => 'gma', 'Glyma.15G074500' => 'gma', 'Glyma.15G094100' => 'gma', 'Glyma.17G247200' => 'gma', 'Glyma.18G120100' => 'gma', 'Glyma.20G176000' => 'gma', 'Gohir.A01G063600' => 'ghi', 'Gohir.A01G170301' => 'ghi', 'Gohir.A02G060500' => 'ghi', 'Gohir.A05G133850' => 'ghi', 'Gohir.A05G161400' => 'ghi', 'Gohir.A06G012900' => 'ghi', 'Gohir.A06G035901' => 'ghi', 'Gohir.A06G127100' => 'ghi', 'Gohir.A06G210500' => 'ghi', 'Gohir.A08G008650' => 'ghi', 'Gohir.A09G072700' => 'ghi', 'Gohir.A09G088301' => 'ghi', 'Gohir.A10G040600' => 'ghi', 'Gohir.A12G036300' => 'ghi', 'Gohir.A12G143350' => 'ghi', 'Gohir.A12G165500' => 'ghi', 'Gohir.A13G145700' => 'ghi', 'Gohir.D01G050000' => 'ghi', 'Gohir.D01G051366' => 'ghi', 'Gohir.D01G161350' => 'ghi', 'Gohir.D02G065900' => 'ghi', 'Gohir.D05G164200' => 'ghi', 'Gohir.D05G355500' => 'ghi', 'Gohir.D06G010400' => 'ghi', 'Gohir.D06G111250' => 'ghi', 'Gohir.D06G132000' => 'ghi', 'Gohir.D06G210500' => 'ghi', 'Gohir.D07G165675' => 'ghi', 'Gohir.D08G062240' => 'ghi', 'Gohir.D08G086101' => 'ghi', 'Gohir.D08G138060' => 'ghi', 'Gohir.D09G072300' => 'ghi', 'Gohir.D10G041400' => 'ghi', 'Gohir.D11G191020' => 'ghi', 'Gohir.D11G212066' => 'ghi', 'Gohir.D12G036300' => 'ghi', 'Gohir.D12G168600' => 'ghi', 'Gohir.D13G150600' => 'ghi', 'Gorai.001G057300' => 'gra', 'Gorai.002G069900' => 'gra', 'Gorai.002G200000' => 'gra', 'Gorai.003G067600' => 'gra', 'Gorai.005G074800' => 'gra', 'Gorai.006G087300' => 'gra', 'Gorai.008G037500' => 'gra', 'Gorai.008G181400' => 'gra', 'Gorai.009G169400' => 'gra', 'Gorai.009G387900' => 'gra', 'Gorai.010G013300' => 'gra', 'Gorai.010G153800' => 'gra', 'Gorai.010G255800' => 'gra', 'Gorai.011G043700' => 'gra', 'Gorai.011G198900' => 'gra', 'Gorai.013G168400' => 'gra', 'GSVIVG01005212001' => 'vvi', 'GSVIVG01006163001' => 'vvi', 'GSVIVG01009625001' => 'vvi', 'GSVIVG01014338001' => 'vvi', 'GSVIVG01020005001' => 'vvi', 'GSVIVG01021450001' => 'vvi', 'GSVIVG01023975001' => 'vvi', 'GSVIVG01034490001' => 'vvi', 'HanXRQChr04g0112071' => 'han', 'HanXRQChr05g0131151' => 'han', 'HanXRQChr09g0262371' => 'han', 'HanXRQChr09g0268401' => 'han', 'HanXRQChr10g0279241' => 'han', 'HanXRQChr10g0297961' => 'han', 'HanXRQChr11g0326231' => 'han', 'HanXRQChr11g0328471' => 'han', 'HanXRQChr16g0507941' => 'han', 'HanXRQChr17g0560211' => 'han', 'Haze_02108' => 'cav', 'Haze_02428' => 'cav', 'Haze_05593' => 'cav', 'Haze_06448' => 'cav', 'Haze_09427' => 'cav', 'Haze_12022' => 'cav', 'Haze_17612' => 'cav', 'Haze_17928' => 'cav', 'Hma1.2p1_0032F.1_g019250' => 'hma', 'Hma1.2p1_0163F.1_g072690' => 'hma', 'Hma1.2p1_0265F.1_g106710' => 'hma', 'Hma1.2p1_0286F.1_g113970' => 'hma', 'Hma1.2p1_0363F.1_g136640' => 'hma', 'Hma1.2p1_0584F.1_g183470' => 'hma', 'Hma1.2p1_0885F.1_g232570' => 'hma', 'HPP92_006022' => 'vpl', 'HPP92_007320' => 'vpl', 'HPP92_011521' => 'vpl', 'HPP92_019387' => 'vpl', 'HPP92_024038' => 'vpl', 'Hund05891' => 'sun', 'Hund06450' => 'sun', 'Hund12053' => 'sun', 'Hund16800' => 'sun', 'Hund21222' => 'sun', 'Hund22896' => 'sun', 'Hund23746' => 'sun', 'Hund27083' => 'sun', 'Lalb_Chr02g0141831' => 'lal', 'Lalb_Chr02g0141841' => 'lal', 'Lalb_Chr05g0220411' => 'lal', 'Lalb_Chr06g0162081' => 'lal', 'Lalb_Chr09g0327651' => 'lal', 'Lalb_Chr13g0295051' => 'lal', 'Lalb_Chr15g0086801' => 'lal', 'Lalb_Chr16g0383781' => 'lal', 'Lalb_Chr16g0383791' => 'lal', 'Lalb_Chr18g0055441' => 'lal', 'Lalb_Chr18g0059611' => 'lal', 'Lalb_Chr20g0109661' => 'lal', 'Lalb_Chr20g0109831' => 'lal', 'Lalb_Chr20g0121871' => 'lal', 'Lalb_Chr22g0355361' => 'lal', 'Lalb_Chr25g0286371' => 'lal', 'Lj1A1187G43' => 'lonja', 'Lj1A1205T50' => 'lonja', 'Lj1A800G33' => 'lonja', 'Lj1C1187T7' => 'lonja', 'Lj1C843T11' => 'lonja', 'Lj1g0010940' => 'lja', 'Lj2A288T69' => 'lonja', 'Lj3g0024276' => 'lja', 'Lj4A47T76' => 'lonja', 'Lj4g0005805' => 'lja', 'Lj4g0006097' => 'lja', 'Lj4g0008528' => 'lja', 'Lj4g0024907' => 'lja', 'Lj5g0012472' => 'lja', 'Lj5g0018648' => 'lja', 'Lj6C789G1' => 'lonja', 'Lj6g0004000' => 'lja', 'Lj7A292G67' => 'lonja', 'Lj7A292T64' => 'lonja', 'Lj9A400T58' => 'lonja', 'Lsat_1_v5_gn_1_126181' => 'lsa', 'Lsat_1_v5_gn_4_123041' => 'lsa', 'Lsat_1_v5_gn_4_133620' => 'lsa', 'Lsat_1_v5_gn_4_53221' => 'lsa', 'Lsat_1_v5_gn_4_71961' => 'lsa', 'Lsat_1_v5_gn_7_105241' => 'lsa', 'Lsat_1_v5_gn_7_21361' => 'lsa', 'Lsat_1_v5_gn_7_28860' => 'lsa', 'Lsat_1_v5_gn_7_31260' => 'lsa', 'Lsat_1_v5_gn_8_52801' => 'lsa', 'Manes.02G191400' => 'mes', 'Manes.03G110100' => 'mes', 'Manes.04G071100' => 'mes', 'Manes.05G100500' => 'mes', 'Manes.05G164700' => 'mes', 'Manes.15G087000' => 'mes', 'Manes.15G121500' => 'mes', 'Manes.16G028300' => 'mes', 'Manes.17G046100' => 'mes', 'Manes.17G069800' => 'mes', 'Manes.18G100500' => 'mes', 'Mapoly0002s0109' => 'mpo', 'Mapoly0024s0007' => 'mpo', 'Mapoly0089s0032' => 'mpo', 'MBI04_g42241_MAGBIO' => 'mbi', 'MBI05_g11988_MAGBIO' => 'mbi', 'MBI05_g35452_MAGBIO' => 'mbi', 'MBI07_g30179_MAGBIO' => 'mbi', 'MBI07_g35859_MAGBIO' => 'mbi', 'MBI07_g35860_MAGBIO' => 'mbi', 'MBI07_g37166_MAGBIO' => 'mbi', 'MBI08_g18172_MAGBIO' => 'mbi', 'MBI09_g08441_MAGBIO' => 'mbi', 'MBI13_g01676_MAGBIO' => 'mbi', 'MBI14_g42955_MAGBIO' => 'mbi', 'MBI16_g13161_MAGBIO' => 'mbi', 'MBI17_g27204_MAGBIO' => 'mbi', 'MBI19_g21595_MAGBIO' => 'mbi', 'MD00G1148400' => 'mdo', 'MD02G1301200' => 'mdo', 'MD03G1227800' => 'mdo', 'MD05G1041100' => 'mdo', 'MD05G1124800' => 'mdo', 'MD05G1284000' => 'mdo', 'MD05G1338800' => 'mdo', 'MD05G1338900' => 'mdo', 'MD07G1022800' => 'mdo', 'MD10G1047500' => 'mdo', 'MD10G1127500' => 'mdo', 'MD10G1262300' => 'mdo', 'MD10G1293800' => 'mdo', 'MD16G1074300' => 'mdo', 'Medtr1g021670' => 'mtr', 'Medtr1g096320' => 'mtr', 'Medtr2g013690' => 'mtr', 'Medtr2g019450' => 'mtr', 'Medtr2g085170' => 'mtr', 'Medtr4g088785' => 'mtr', 'Medtr8g055930' => 'mtr', 'Medtr8g085850' => 'mtr', 'MELO3C002605.2' => 'cme', 'MELO3C003891.2' => 'cme', 'MELO3C004012.2' => 'cme', 'MELO3C007134.2' => 'cme', 'MELO3C008118.2' => 'cme', 'MELO3C016700.2' => 'cme', 'MELO3C024127.2' => 'cme', 'MELO3C033361.2' => 'cme', 'MELO3C033362.2' => 'cme', 'Migut.C00430' => 'egut', 'Migut.C01246' => 'egut', 'Migut.E00101' => 'egut', 'Migut.H01486' => 'egut', 'Migut.H01939' => 'egut', 'Migut.K00360' => 'egut', 'Migut.M00910' => 'egut', 'Migut.M01139' => 'egut', 'Migut.N02677' => 'egut', 'MSTRG.13252' => 'ama', 'MSTRG.14701' => 'ama', 'MSTRG.1521' => 'ama', 'MSTRG.15884' => 'ama', 'MSTRG.16242' => 'ama', 'MSTRG.22285' => 'ama', 'MSTRG.22444' => 'ama', 'MSTRG.2349' => 'ama', 'MSTRG.26308' => 'ama', 'MSTRG.28296' => 'ama', 'MSTRG.9895' => 'ama', 'Nitab4.5_0000110g0060' => 'nta', 'Nitab4.5_0000420g0130' => 'nta', 'Nitab4.5_0000422g0030' => 'nta', 'Nitab4.5_0000560g0180' => 'nta', 'Nitab4.5_0000703g0100' => 'nta', 'Nitab4.5_0000786g0200' => 'nta', 'Nitab4.5_0001336g0020' => 'nta', 'Nitab4.5_0001796g0030' => 'nta', 'Nitab4.5_0003348g0060' => 'nta', 'Nitab4.5_0003698g0040' => 'nta', 'Nitab4.5_0003942g0090' => 'nta', 'Nitab4.5_0004775g0070' => 'nta', 'Nitab4.5_0004864g0030' => 'nta', 'Nitab4.5_0005615g0020' => 'nta', 'Nitab4.5_0009288g0030' => 'nta', 'Nitab4.5_0009341g0010' => 'nta', 'Nitab4.5_0009535g0010' => 'nta', 'Nn1g03995' => 'nnu', 'Nn1g04100' => 'nnu', 'Nn1g06530' => 'nnu', 'Nn3g16404' => 'nnu', 'Nn3g17212' => 'nnu', 'Nn3g20776' => 'nnu', 'Nn3g21923' => 'nnu', 'Nn5g27737' => 'nnu', 'Nn5g29461' => 'nnu', 'Nn7g38355' => 'nnu', 'Nn8g39873' => 'nnu', 'Oeu000548.2' => 'oeu', 'Oeu004672.1' => 'oeu', 'Oeu015605.2' => 'oeu', 'Oeu016092.1' => 'oeu', 'Oeu017879.3' => 'oeu', 'Oeu024910.1' => 'oeu', 'Oeu028965.1' => 'oeu', 'Oeu031269.1' => 'oeu', 'Oeu031270.1' => 'oeu', 'Oeu032535.1' => 'oeu', 'Oeu034151.1' => 'oeu', 'Oeu034152.1' => 'oeu', 'Oeu034588.2' => 'oeu', 'Oeu050846.1' => 'oeu', 'Oeu050849.2' => 'oeu', 'Oeu051063.2' => 'oeu', 'Oeu052368.1' => 'oeu', 'Oeu052370.1' => 'oeu', 'Os01g0210400' => 'osa', 'Os01g0304300' => 'osa', 'Os01g0749100' => 'osa', 'Os02g0745800' => 'osa', 'Os03g0769050' => 'osa', 'Os05g0531500' => 'osa', 'Os06g0724300' => 'osa', 'Os11g0198100' => 'osa', 'Peaxi162Scf00069g01425' => 'pax', 'Peaxi162Scf00280g00811' => 'pax', 'Peaxi162Scf00310g00615' => 'pax', 'Peaxi162Scf00362g00542' => 'pax', 'Peaxi162Scf00461g00310' => 'pax', 'Peaxi162Scf00530g00118' => 'pax', 'Peaxi162Scf00541g00057' => 'pax', 'Peaxi162Scf00661g00017' => 'pax', 'Peaxi162Scf00926g00027' => 'pax', 'Peaxi162Scf01064g00263' => 'pax', 'Peaxi162Scf01211g00135' => 'pax', 'PGR004G2336' => 'pgr', 'PGR042G0327' => 'pgr', 'PGR042G1957' => 'pgr', 'PGR042G2003' => 'pgr', 'PGR042G3929' => 'pgr', 'PGR083G1137' => 'pgr', 'PGR083G1364' => 'pgr', 'PGSC0003DMG400003381' => 'stu', 'PGSC0003DMG400003417' => 'stu', 'PGSC0003DMG400008981' => 'stu', 'PGSC0003DMG400012417' => 'stu', 'PGSC0003DMG400012823' => 'stu', 'PGSC0003DMG400016885' => 'stu', 'PGSC0003DMG400022812' => 'stu', 'PGSC0003DMG400029726' => 'stu', 'PGSC0003DMG401009243' => 'stu', 'PGSC0003DMG401031505' => 'stu', 'PGSC0003DMG402031505' => 'stu', 'Phvul.001G017600' => 'pvu', 'Phvul.002G193500' => 'pvu', 'Phvul.002G228900' => 'pvu', 'Phvul.002G236800' => 'pvu', 'Phvul.003G049500' => 'pvu', 'Phvul.005G072000' => 'pvu', 'Phvul.006G164800' => 'pvu', 'Phvul.006G185100' => 'pvu', 'Phvul.007G090000' => 'pvu', 'Potri.001G399800' => 'ptr', 'Potri.002G149900' => 'ptr', 'Potri.004G044100' => 'ptr', 'Potri.004G177600' => 'ptr', 'Potri.009G138000' => 'ptr', 'Potri.010G094000' => 'ptr', 'Potri.011G053000' => 'ptr', 'Potri.011G119300' => 'ptr', 'Potri.013G113700' => 'ptr', 'Potri.018G107800' => 'ptr', 'Potri.019G084100' => 'ptr', 'Pp3c14_23720' => 'ppa', 'Pp3c16_6340' => 'ppa', 'Pp3c23_13420' => 'ppa', 'Pp3c24_2740' => 'ppa', 'Pp3c25_860' => 'ppa', 'Pp3c8_21750' => 'ppa', 'Prupe.1G273000' => 'ppe', 'Prupe.1G273700' => 'ppe', 'Prupe.1G274100' => 'ppe', 'Prupe.2G023300' => 'ppe', 'Prupe.4G048000' => 'ppe', 'Prupe.4G080400' => 'ppe', 'Prupe.4G181200' => 'ppe', 'Prupe.8G056900' => 'ppe', 'Prupe.8G168700' => 'ppe', 'Psat1g189080' => 'psa', 'Psat1g204760' => 'psa', 'Psat4g175560' => 'psa', 'Psat4g177720' => 'psa', 'Psat5g244240' => 'psa', 'Psat6g010720' => 'psa', 'Psat6g187200' => 'psa', 'Psat7g072040' => 'psa', 'PSO017G3501' => 'pso', 'PSO063G2148' => 'pso', 'PSO063G5608' => 'pso', 'PSO210G6392' => 'pso', 'PSO541G2319' => 'pso', 'PSO541G2836' => 'pso', 'PSO541G4012' => 'pso', 'PSO541G6253' => 'pso', 'PSO675G0580' => 'pso', 'PSO675G0856' => 'pso', 'PSO675G5635' => 'pso', 'PSO675G9157' => 'pso', 'PSO832G1660' => 'pso', 'PSO832G1969' => 'pso', 'QL02p007186' => 'qlo', 'QL02p033904' => 'qlo', 'QL03p064391' => 'qlo', 'QL05p040593' => 'qlo', 'QL05p058242' => 'qlo', 'QL08p021825' => 'qlo', 'QL11p004981' => 'qlo', 'RcHm_v2.0_Chr1g0318301' => 'rch', 'RcHm_v2.0_Chr4g0418501' => 'rch', 'RcHm_v2.0_Chr4g0439971' => 'rch', 'RcHm_v2.0_Chr5g0008541' => 'rch', 'RcHm_v2.0_Chr5g0014101' => 'rch', 'RcHm_v2.0_Chr5g0014131' => 'rch', 'RcHm_v2.0_Chr5g0033621' => 'rch', 'RcHm_v2.0_Chr6g0272041' => 'rch', 'RcHm_v2.0_Chr6g0278831' => 'rch', 'Rhsim02G0130400' => 'rsi', 'Rhsim02G0171100' => 'rsi', 'Rhsim05G0053000' => 'rsi', 'Rhsim05G0053100' => 'rsi', 'Rhsim06G0096500' => 'rsi', 'Rhsim06G0096600' => 'rsi', 'Rhsim06G0199100' => 'rsi', 'Rhsim12G0062300' => 'rsi', 'Rhsim12G0062800' => 'rsi', 'Sabra02G0118600' => 'sbr', 'Sabra04G0027300' => 'sbr', 'Sabra04G0119500' => 'sbr', 'Sabra08G0112500' => 'sbr', 'Sabra11G0036800' => 'sbr', 'Sabra11G0103800' => 'sbr', 'Sabra13G0096300' => 'sbr', 'Sabra16G0262300' => 'sbr', 'Sabra18G0091700' => 'sbr', 'Sabra19G0095400' => 'sbr', 'SalBow6G3080' => 'sbo', 'SalBow7G1157' => 'sbo', 'SalBow7G2123' => 'sbo', 'SalBow7G2285' => 'sbo', 'SalBow7G3537' => 'sbo', 'SalBow8G2947' => 'sbo', 'SalBow8G4463' => 'sbo', 'SalBow8G5466' => 'sbo', 'Sc01g0001750' => 'sci', 'Sc02g0006640' => 'sci', 'Sc02g0006670' => 'sci', 'Sc04g0008220' => 'sci', 'Sc05g0006190' => 'sci', 'Sc08g0002760' => 'sci', 'Sc17g0006170' => 'sci', 'Sc22g0002050' => 'sci', 'Sc23g0001190' => 'sci', 'Sc24g0000980' => 'sci', 'Sed0006245' => 'sed', 'Sed0007543' => 'sed', 'Sed0009411' => 'sed', 'Sed0010765' => 'sed', 'Sed0012944' => 'sed', 'Sed0014682' => 'sed', 'Sed0016174' => 'sed', 'Sed0016796' => 'sed', 'Sed0020317' => 'sed', 'Sed0021467' => 'sed', 'SEGI_01316' => 'sgi', 'SEGI_03374' => 'sgi', 'SEGI_16265' => 'sgi', 'SEGI_18569' => 'sgi', 'SEGI_20351' => 'sgi', 'SEGI_26395' => 'sgi', 'SEGI_29469' => 'sgi', 'SEGI_34771' => 'sgi', 'SEGI_36769' => 'sgi', 'SEGI_37139' => 'sgi', 'SGA_v2.0_scaffold100G29687' => 'sas', 'SGA_v2.0_scaffold118G32472' => 'sas', 'SGA_v2.0_scaffold14G07051' => 'sas', 'SGA_v2.0_scaffold183G39845' => 'sas', 'SGA_v2.0_scaffold1G00174' => 'sas', 'SGA_v2.0_scaffold22G09714' => 'sas', 'SGA_v2.0_scaffold333G48992' => 'sas', 'SGA_v2.0_scaffold46G17491' => 'sas', 'SGA_v2.0_scaffold49G18294' => 'sas', 'SGA_v2.0_scaffold63G21658' => 'sas', 'SHI01741' => 'shi', 'SHI05771' => 'shi', 'SHI18077' => 'shi', 'SHI20525' => 'shi', 'SHI20527' => 'shi', 'SHI20528' => 'shi', 'SMO172G0185' => 'smo', 'SMO198G0020' => 'smo', 'SMO351G0006' => 'smo', 'SMO356G0118' => 'smo', 'SMO358G0296' => 'smo', 'SMO367G0079' => 'smo', 'SMO367G1277' => 'smo', 'Solyc01g014220.3' => 'sly', 'Solyc01g111770.2' => 'sly', 'Solyc02g078180.3' => 'sly', 'Solyc03g006430.3' => 'sly', 'Solyc03g006456.1' => 'sly', 'Solyc03g079860.2' => 'sly', 'Solyc04g079770.3' => 'sly', 'Solyc05g007430.4' => 'sly', 'Solyc07g063150.3' => 'sly', 'Solyc08g016620.3' => 'sly', 'Solyc09g057590.3' => 'sly', 'Solyc09g057600.1' => 'sly', 'Solyc10g009050.3' => 'sly', 'Solyc11g017420.2' => 'sly', 'Sopen01g053810' => 'spe', 'Sopen02g023040' => 'spe', 'Sopen03g002440' => 'spe', 'Sopen04g033350' => 'spe', 'Sopen05g003310' => 'spe', 'Sopen07g004050' => 'spe', 'Sopen07g031340' => 'spe', 'Sopen08g006990' => 'spe', 'Sopen10g004830' => 'spe', 'Sopen11g009370' => 'spe', 'Sp1g24450' => 'spa', 'Sp1g29670' => 'spa', 'Sp1g39600' => 'spa', 'Sp2g11080' => 'spa', 'Sp2g13970' => 'spa', 'Sp4g16130' => 'spa', 'Sp6g13080' => 'spa', 'Sp7g37270' => 'spa', 'TAR371G0065' => 'tar', 'TAR376G0340' => 'tar', 'TAR376G0435' => 'tar', 'TAR381G0002' => 'tar', 'TAR381G1236' => 'tar', 'TAR624G0055' => 'tar', 'TAR624G0324' => 'tar', 'TAR624G0696' => 'tar', 'TAR624G0906' => 'tar', 'TAR625G0107' => 'tar', 'TAR626G0015' => 'tar', 'TAR626G1356' => 'tar', 'TAR627G0888' => 'tar', 'TAR628G0399' => 'tar', 'TAR628G1327' => 'tar', 'TAR629G2831' => 'tar', 'TAR629G2874' => 'tar', 'TAR633G1432' => 'tar', 'TAR633G2771' => 'tar', 'THA.LOC104803394' => 'tha', 'THA.LOC104805153' => 'tha', 'THA.LOC104806784' => 'tha', 'THA.LOC104810473' => 'tha', 'THA.LOC104813100' => 'tha', 'THA.LOC104814215' => 'tha', 'THA.LOC104815554' => 'tha', 'THA.LOC104820544' => 'tha', 'THA.LOC104824754' => 'tha', 'THA.LOC104827717' => 'tha', 'Thecc.02G031400' => 'tca', 'Thecc.02G055900' => 'tca', 'Thecc.02G350800' => 'tca', 'Thecc.06G150900' => 'tca', 'Thecc.06G186600' => 'tca', 'Thecc.07G089600' => 'tca', 'Thecc.08G020400' => 'tca', 'Thecc.08G182100' => 'tca', 'Thhalv10000873m.g' => 'esa', 'Thhalv10004185m.g' => 'esa', 'Thhalv10006981m.g' => 'esa', 'Thhalv10007204m.g' => 'esa', 'Thhalv10011374m.g' => 'esa', 'Thhalv10013482m.g' => 'esa', 'Thhalv10017801m.g' => 'esa', 'Thhalv10024983m.g' => 'esa', 'TPR.G12072' => 'tpr', 'TPR.G15769' => 'tpr', 'TPR.G16504' => 'tpr', 'TPR.G16506' => 'tpr', 'TPR.G24345' => 'tpr', 'TPR.G26666' => 'tpr', 'TPR.G27320' => 'tpr', 'TPR.G31819' => 'tpr', 'TPR.G38879' => 'tpr', 'TPR.G39015' => 'tpr', 'TPR.G8819' => 'tpr', 'TWI09G0924' => 'twi', 'TWI12G0811' => 'twi', 'TWI12G1294' => 'twi', 'TWI31G0150' => 'twi', 'TWI36G1262' => 'twi', 'TWI38G1287' => 'twi', 'TWI38G1633' => 'twi', 'TWI38G1982' => 'twi', 'TWI39G0116' => 'twi', 'TWI60G1011' => 'twi', 'TWI63G0171' => 'twi', 'TWI73G0839' => 'twi', 'TWI79G1511' => 'twi', 'unitig_0.g915' => 'ugi', 'unitig_0.g916' => 'ugi', 'unitig_21.g20219' => 'ugi', 'unitig_21.g20416' => 'ugi', 'unitig_578.g16132' => 'ugi', 'unitig_578.g16718' => 'ugi', 'unitig_62.g23481' => 'ugi', 'unitig_744.g24535' => 'ugi', 'unitig_749.g13525' => 'ugi', 'vmacro01248' => 'vma', 'vmacro02290' => 'vma', 'vmacro10946' => 'vma', 'vmacro11865' => 'vma', 'vmacro12493' => 'vma', 'vmacro17322' => 'vma', 'vmacro21599' => 'vma', 'vmacro23041' => 'vma', 'VMungo0251G0004' => 'vmu', 'VMungo0251G2639' => 'vmu', 'VMungo0251G2967' => 'vmu', 'VMungo0540G0864' => 'vmu', 'VMungo0540G1569' => 'vmu', 'VMungo0647G0317' => 'vmu', 'VMungo0720G1373' => 'vmu', 'VMungo0720G1508' => 'vmu', 'VMungo1080G0485' => 'vmu', 'VMungo1215G3177' => 'vmu', 'Zm00001eb112600' => 'zma', 'Zm00001eb120220' => 'zma', 'Zm00001eb153240' => 'zma', 'Zm00001eb168880' => 'zma', 'Zm00001eb213920' => 'zma', 'Zm00001eb228280' => 'zma', 'Zm00001eb254580' => 'zma', 'Zm00001eb272180' => 'zma', 'Zm00001eb293190' => 'zma', 'Zm00001eb322930' => 'zma', 'Zm00001eb353360' => 'zma', 'Zm00001eb353390' => 'zma', 'Zm00001eb353430' => 'zma', 'Zm00001eb353440' => 'zma', 'Zm00001eb353780' => 'zma' ) $gf_id = 'HOM05D000499' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000499' ) $data_identifier = 'HOM05D000499' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 29, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 12, 'amhyb' => (int) 8, 'aly' => (int) 12, 'aox' => (int) 9, 'arhy' => (int) 26, 'ath' => (int) 8, 'atr' => (int) 7, 'acertr' => (int) 10, 'cqu' => (int) 15, 'bca' => (int) 29, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 11, 'cansat' => (int) 8, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 9, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 8, 'cpa' => (int) 10, 'csa' => (int) 7, 'camsi' => (int) 20, 'dca' => (int) 8, 'din' => (int) 12, 'dzi' => (int) 14, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 6, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 38, 'gra' => (int) 16, 'vvi' => (int) 8, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 5, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 11, 'lja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 11, 'mpo' => (int) 3, 'mbi' => (int) 14, 'mdo' => (int) 14, 'mtr' => (int) 8, 'cme' => (int) 9, 'egut' => (int) 9, 'ama' => (int) 11, 'nta' => (int) 17, 'nnu' => (int) 11, 'oeu' => (int) 18, 'osa' => (int) 8, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 6, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 9, 'rsi' => (int) 9, 'sbr' => (int) 10, 'sbo' => (int) 8, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 10, 'sas' => (int) 10, 'shi' => (int) 6, 'smo' => (int) 7, 'sly' => (int) 14, 'spe' => (int) 10, 'spa' => (int) 8, 'tar' => (int) 19, 'tha' => (int) 10, 'tca' => (int) 8, 'esa' => (int) 8, 'tpr' => (int) 11, 'twi' => (int) 13, 'ugi' => (int) 9, 'vma' => (int) 8, 'vmu' => (int) 10, 'zma' => (int) 15 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb353780' $species_info = array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ) $local_species = 'aox' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000499', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1066', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p29780' => 'bna', 'A02p33180' => 'bna', 'A03p16470' => 'bna', 'A03p66010' => 'bna', 'A04p25970' => 'bna', 'A06p01270' => 'bna', 'A06p46080' => 'bna', 'A07p11400' => 'bna', 'A08p01840' => 'bna', 'A08p08230' => 'bna', 'A08p25740' => 'bna', 'A09p32070' => 'bna', 'A09p37830' => 'bna', 'A09p42840' => 'bna', 'A09p42850' => 'bna', 'Aa31LG10G2060' => 'aar', 'Aa31LG2G7410' => 'aar', 'Aa31LG6G10200' => 'aar', 'Aa31LG6G16680' => 'aar', 'Aa31LG6G8470' => 'aar', 'Aa31LG9G12730' => 'aar', 'Aa31LG9G13680' => 'aar', 'Aa31LG9G14920' => 'aar', 'Aa31LG9G6650' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4977' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5467' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3254' => 'aag', 'Actinidia02578' => 'ach', 'Actinidia07693' => 'ach', 'Actinidia08413' => 'ach', 'Actinidia08414' => 'ach', 'Actinidia15289' => 'ach', 'Actinidia19871' => 'ach', 'Actinidia21475' => 'ach', 'Actinidia22576' => 'ach', 'Actinidia28327' => 'ach', 'Actinidia32491' => 'ach', 'Actinidia39463' => 'ach', 'Actinidia39571' => 'ach', 'Ah.01g013750' => 'amhyb', 'Ah.01g023210' => 'amhyb', 'Ah.04g164850' => 'amhyb', 'Ah.05g178060' => 'amhyb', 'Ah.07g204270' => 'amhyb', 'Ah.07g208480' => 'amhyb', 'Ah.09g237410' => 'amhyb', 'Ah.14g089460' => 'amhyb', 'AL1G41790' => 'aly', 'AL1G49050' => 'aly', 'AL1G53810' => 'aly', 'AL1G61400' => 'aly', 'AL4G18580' => 'aly', 'AL5G12510' => 'aly', 'AL5G12540' => 'aly', 'AL6G43230' => 'aly', 'AL7G10370' => 'aly', 'AL7G19250' => 'aly', 'AL8G12240' => 'aly', 'AL8G18540' => 'aly', 'Aqoxy1G02409' => 'aox', 'Aqoxy2G03993' => 'aox', 'Aqoxy3G03357' => 'aox', 'Aqoxy4G00785' => 'aox', 'Aqoxy5G02598' => 'aox', 'Aqoxy6G00132' => 'aox', 'Aqoxy7G01776' => 'aox', 'Aqoxy7G02316' => 'aox', 'Aqoxy7G03973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.12AFKW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B8730' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27IQR1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3F75VG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3RE0GA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41TCQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.527VTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FIR39' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5W8UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DA38EV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ63HS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H1I32C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HC27T5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4M8AP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7N3CZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9UVDZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LS1NQA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT1D4B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SKC4TM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCFV76' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF9Q1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQWD9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1ZM88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WE07RT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YCK7VH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJE6Q6' => 'arhy', 'AT1G28240' => 'ath', 'AT1G34550' => 'ath', 'AT1G53040' => 'ath', 'AT2G02910' => 'ath', 'AT4G09630' => 'ath', 'AT4G38500' => 'ath', 'AT5G42660' => 'ath', 'AT5G46220' => 'ath', 'ATR0152G026' => 'atr', 'ATR0564G343' => 'atr', 'ATR0706G151' => 'atr', 'ATR0733G207' => 'atr', 'ATR0751G234' => 'atr', 'ATR0807G048' => 'atr', 'ATR1091G084' => 'atr', 'Atru.chr10.1229' => 'acertr', 'Atru.chr10.1230' => 'acertr', 'Atru.chr10.1874' => 'acertr', 'Atru.chr11.1808' => 'acertr', 'Atru.chr13.1795' => 'acertr', 'Atru.chr13.570' => 'acertr', 'Atru.chr2.2608' => 'acertr', 'Atru.chr2.2609' => 'acertr', 'Atru.chr5.3428' => 'acertr', 'Atru.chr8.1171' => 'acertr', 'AUR62004651' => 'cqu', 'AUR62008675' => 'cqu', 'AUR62010014' => 'cqu', 'AUR62013004' => 'cqu', 'AUR62014825' => 'cqu', 'AUR62015015' => 'cqu', 'AUR62015151' => 'cqu', 'AUR62017020' => 'cqu', 'AUR62019422' => 'cqu', 'AUR62023570' => 'cqu', 'AUR62025571' => 'cqu', 'AUR62029098' => 'cqu', 'AUR62033863' => 'cqu', 'AUR62034296' => 'cqu', 'AUR62040075' => 'cqu', 'BcaB02g07334' => 'bca', 'BcaB02g10575' => 'bca', 'BcaB03g12119' => 'bca', 'BcaB03g12120' => 'bca', 'BcaB03g13945' => 'bca', 'BcaB04g17123' => 'bca', 'BcaB04g17867' => 'bca', 'BcaB04g19839' => 'bca', 'BcaB07g30317' => 'bca', 'BcaB07g32432' => 'bca', 'BcaB07g33362' => 'bca', 'BcaB08g36611' => 'bca', 'BcaC01g00028' => 'bca', 'BcaC01g01356' => 'bca', 'BcaC01g02034' => 'bca', 'BcaC01g06051' => 'bca', 'BcaC03g16839' => 'bca', 'BcaC03g17176' => 'bca', 'BcaC05g26829' => 'bca', 'BcaC06g31490' => 'bca', 'BcaC06g35344' => 'bca', 'BcaC06g36570' => 'bca', 'BcaC07g37537' => 'bca', 'BcaC08g43491' => 'bca', 'BcaC08g43773' => 'bca', 'BcaNung00234' => 'bca', 'BcaNung01982' => 'bca', 'BcaNung03707' => 'bca', 'BcaNung06454' => 'bca', 'BolC2t10762H' => 'bol', 'BolC2t11191H' => 'bol', 'BolC3t14322H' => 'bol', 'BolC3t19747H' => 'bol', 'BolC3t21425H' => 'bol', 'BolC4t27800H' => 'bol', 'BolC5t31423H' => 'bol', 'BolC6t35951H' => 'bol', 'BolC6t36282H' => 'bol', 'BolC7t40678H' => 'bol', 'BolC7t40679H' => 'bol', 'BolC7t42222H' => 'bol', 'BolC7t43492H' => 'bol', 'BolC7t46785H' => 'bol', 'BolC8t47853H' => 'bol', 'BolC9t56805H' => 'bol', 'BraA02t08000Z' => 'bra', 'BraA02t08341Z' => 'bra', 'BraA03t10936Z' => 'bra', 'BraA03t15657Z' => 'bra', 'BraA04t18100Z' => 'bra', 'BraA05t20523Z' => 'bra', 'BraA06t23353Z' => 'bra', 'BraA06t27473Z' => 'bra', 'BraA06t27769Z' => 'bra', 'BraA07t28928Z' => 'bra', 'BraA08t32236Z' => 'bra', 'BraA08t32841Z' => 'bra', 'BraA08t34524Z' => 'bra', 'BraA09t38742Z' => 'bra', 'BraA09t39295Z' => 'bra', 'C02p47180' => 'bna', 'C02p50990' => 'bna', 'C03p19360' => 'bna', 'C03p74950' => 'bna', 'C03p91000' => 'bna', 'C04p63260' => 'bna', 'C05p27050' => 'bna', 'C06p08750' => 'bna', 'C06p11490' => 'bna', 'C07p02820' => 'bna', 'C07p17180' => 'bna', 'C07p29440' => 'bna', 'C07p63730' => 'bna', 'C09p39260' => 'bna', 'CAN.G1164.34' => 'can', 'CAN.G1164.39' => 'can', 'CAN.G1530.3' => 'can', 'CAN.G162.61' => 'can', 'CAN.G176.6' => 'can', 'CAN.G289.49' => 'can', 'CAN.G370.21' => 'can', 'CAN.G370.22' => 'can', 'CAN.G371.117' => 'can', 'CAN.G58.37' => 'can', 'CAN.G588.98' => 'can', 'CANSAT21G2266' => 'cansat', 'CANSAT25G2799' => 'cansat', 'CANSAT35G0862' => 'cansat', 'CANSAT35G1704' => 'cansat', 'CANSAT35G1760' => 'cansat', 'CANSAT56G3971' => 'cansat', 'CANSAT56G4116' => 'cansat', 'CANSAT80G1259' => 'cansat', 'CARHR027730' => 'chi', 'CARHR033880' => 'chi', 'CARHR043270' => 'chi', 'CARHR145330' => 'chi', 'CARHR145340' => 'chi', 'CARHR175570' => 'chi', 'CARHR181570' => 'chi', 'CARHR258470' => 'chi', 'CARHR260490' => 'chi', 'CARHR294220' => 'chi', 'Carub.0001s2668' => 'cru', 'Carub.0001s3257' => 'cru', 'Carub.0001s4220' => 'cru', 'Carub.0005s0179' => 'cru', 'Carub.0006s2807' => 'cru', 'Carub.0007s0039' => 'cru', 'Carub.0008s0169' => 'cru', 'Carub.0008s0636' => 'cru', 'Ca_00338_v3' => 'car', 'Ca_00542_v3' => 'car', 'Ca_01844_v3' => 'car', 'Ca_10611_v3' => 'car', 'Ca_13326_v3' => 'car', 'Ca_17944_v3' => 'car', 'Ca_18546_v3' => 'car', 'Ca_24219_v3' => 'car', 'Ca_29972_v3' => 'car', 'CBR_g3681' => 'cbr', 'CBR_g40021' => 'cbr', 'Cc01_g08140' => 'ccan', 'Cc02_g13410' => 'ccan', 'Cc02_g37480' => 'ccan', 'Cc05_g12030' => 'ccan', 'Cc09_g03370' => 'ccan', 'Cc09_g10300' => 'ccan', 'Cc10_g03530' => 'ccan', 'Cc10_g11380' => 'ccan', 'CDE01G0176' => 'cde', 'CDE02G0675' => 'cde', 'CDE02G0942' => 'cde', 'CDE02G1153' => 'cde', 'CDE02G4177' => 'cde', 'CDE04G2117' => 'cde', 'CDE04G2736' => 'cde', 'CDE08G1161' => 'cde', 'CDE09G1238' => 'cde', 'Cfa000467' => 'cfa', 'Cfa000947' => 'cfa', 'Cfa004969' => 'cfa', 'Cfa005284' => 'cfa', 'Cfa008993' => 'cfa', 'Cfa018187' => 'cfa', 'Cfa018454' => 'cfa', 'Cfa020585' => 'cfa', 'Ciclev10000424m.g' => 'ccl', 'Ciclev10003605m.g' => 'ccl', 'Ciclev10007828m.g' => 'ccl', 'Ciclev10014620m.g' => 'ccl', 'Ciclev10015169m.g' => 'ccl', 'Ciclev10018291m.g' => 'ccl', 'Ciclev10028256m.g' => 'ccl', 'Ciclev10033822m.g' => 'ccl', 'CiPaw.05G060300' => 'cil', 'CiPaw.05G085000' => 'cil', 'CiPaw.06G083700' => 'cil', 'CiPaw.06G120300' => 'cil', 'CiPaw.09G060500' => 'cil', 'CiPaw.09G123800' => 'cil', 'CiPaw.11G169700' => 'cil', 'CiPaw.12G118300' => 'cil', 'CiPaw.15G071000' => 'cil', 'CiPaw.15G081900' => 'cil', 'ClCG01G024610' => 'cla', 'ClCG03G006070' => 'cla', 'ClCG05G019250' => 'cla', 'ClCG09G009500' => 'cla', 'ClCG11G008200' => 'cla', 'ClCG11G018080' => 'cla', 'COL.COLO4_17373' => 'col', 'COL.COLO4_22994' => 'col', 'COL.COLO4_26389' => 'col', 'COL.COLO4_27170' => 'col', 'COL.COLO4_31074' => 'col', 'COL.COLO4_31465' => 'col', 'COL.COLO4_36438' => 'col', 'COL.COLO4_36439' => 'col', 'Cpa.g.c38781' => 'cpa', 'Cpa.g.sc128.12' => 'cpa', 'Cpa.g.sc166.7' => 'cpa', 'Cpa.g.sc166.8' => 'cpa', 'Cpa.g.sc20.111' => 'cpa', 'Cpa.g.sc27.31' => 'cpa', 'Cpa.g.sc64.36' => 'cpa', 'Cpa.g.sc64.37' => 'cpa', 'Cpa.g.sc66.49' => 'cpa', 'Cpa.g.sc80.64' => 'cpa', 'CsaV3_1G012320' => 'csa', 'CsaV3_2G008480' => 'csa', 'CsaV3_2G033450' => 'csa', 'CsaV3_3G044830' => 'csa', 'CsaV3_4G033710' => 'csa', 'CsaV3_6G051730' => 'csa', 'CsaV3_7G025350' => 'csa', 'CSS0001067' => 'camsi', 'CSS0005996' => 'camsi', 'CSS0006590' => 'camsi', 'CSS0009673' => 'camsi', 'CSS0010201' => 'camsi', 'CSS0010549' => 'camsi', 'CSS0011364' => 'camsi', 'CSS0014473' => 'camsi', 'CSS0014961' => 'camsi', 'CSS0020191' => 'camsi', 'CSS0021165' => 'camsi', 'CSS0022306' => 'camsi', 'CSS0030591' => 'camsi', 'CSS0030696' => 'camsi', 'CSS0032653' => 'camsi', 'CSS0037487' => 'camsi', 'CSS0041102' => 'camsi', 'CSS0041261' => 'camsi', 'CSS0046246' => 'camsi', 'CSS0049256' => 'camsi', 'DCAR_004075' => 'dca', 'DCAR_011538' => 'dca', 'DCAR_019553' => 'dca', 'DCAR_020952' => 'dca', 'DCAR_021739' => 'dca', 'DCAR_027407' => 'dca', 'DCAR_027913' => 'dca', 'DCAR_028066' => 'dca', 'Dinv05899' => 'din', 'Dinv07563' => 'din', 'Dinv08010' => 'din', 'Dinv14125' => 'din', 'Dinv20172' => 'din', 'Dinv30743' => 'din', 'Dinv31229' => 'din', 'Dinv34162' => 'din', 'Dinv36028' => 'din', 'Dinv39368' => 'din', 'Dinv40565' => 'din', 'Dinv41706' => 'din', 'Duzib052G0089' => 'dzi', 'Duzib116G0641' => 'dzi', 'Duzib132G0069' => 'dzi', 'Duzib132G1219' => 'dzi', 'Duzib147G0278' => 'dzi', 'Duzib160G0480' => 'dzi', 'Duzib170G0661' => 'dzi', 'Duzib177G0591' => 'dzi', 'Duzib187G1353' => 'dzi', 'Duzib192G0858' => 'dzi', 'Duzib192G0883' => 'dzi', 'Duzib213G0506' => 'dzi', 'Duzib235G0289' => 'dzi', 'Duzib251G0422' => 'dzi', 'ECA232G3898' => 'eca', 'ECA233G5950' => 'eca', 'ECA234G1699' => 'eca', 'ECA234G2421' => 'eca', 'ECA236G0426' => 'eca', 'ECA236G4331' => 'eca', 'ECA248G2573' => 'eca', 'EL10Ac1g00077' => 'bvu', 'EL10Ac1g01746' => 'bvu', 'EL10Ac2g03464' => 'bvu', 'EL10Ac4g08176' => 'bvu', 'EL10Ac7g17521' => 'bvu', 'EL10Ac8g20386' => 'bvu', 'EL10Ac9g21343' => 'bvu', 'EL10Ac9g22688' => 'bvu', 'Eucgr.B03434' => 'egr', 'Eucgr.D00618' => 'egr', 'Eucgr.E02395' => 'egr', 'Eucgr.F01129' => 'egr', 'Eucgr.F02622' => 'egr', 'Eucgr.F04207' => 'egr', 'FAN01G0570' => 'fan', 'FAN03G3351' => 'fan', 'FAN06G3702' => 'fan', 'FAN07G2149' => 'fan', 'FAN10G3758' => 'fan', 'FAN11G1170' => 'fan', 'FAN11G2050' => 'fan', 'FAN11G2724' => 'fan', 'FAN12G1700' => 'fan', 'FAN12G2028' => 'fan', 'FAN15G1160' => 'fan', 'FAN15G3063' => 'fan', 'FAN16G2540' => 'fan', 'FAN16G3077' => 'fan', 'FAN16G3624' => 'fan', 'FAN17G0221' => 'fan', 'FAN20G2492' => 'fan', 'FAN20G2905' => 'fan', 'FAN21G0548' => 'fan', 'FAN21G1300' => 'fan', 'FAN22G0077' => 'fan', 'FAN22G1315' => 'fan', 'FAN24G1280' => 'fan', 'FAN24G1445' => 'fan', 'FAN24G3527' => 'fan', 'FAN25G0464' => 'fan', 'FAN25G2885' => 'fan', 'FAN25G3270' => 'fan', 'FAN27G1101' => 'fan', 'FAN27G2846' => 'fan', 'FAN27G3524' => 'fan', 'FvH4_2g11770' => 'fve', 'FvH4_2g15630' => 'fve', 'FvH4_3g05570' => 'fve', 'FvH4_3g09110' => 'fve', 'FvH4_3g19940' => 'fve', 'FvH4_4g04821' => 'fve', 'FvH4_4g31480' => 'fve', 'FvH4_7g01740' => 'fve', 'Glyma.05G130400' => 'gma', 'Glyma.05G156400' => 'gma', 'Glyma.07G197000' => 'gma', 'Glyma.08G085151' => 'gma', 'Glyma.08G114500' => 'gma', 'Glyma.08G300400' => 'gma', 'Glyma.10G215800' => 'gma', 'Glyma.12G224400' => 'gma', 'Glyma.13G179300' => 'gma', 'Glyma.13G218151' => 'gma', 'Glyma.13G238800' => 'gma', 'Glyma.13G276900' => 'gma', 'Glyma.14G078200' => 'gma', 'Glyma.15G074500' => 'gma', 'Glyma.15G094100' => 'gma', 'Glyma.17G247200' => 'gma', 'Glyma.18G120100' => 'gma', 'Glyma.20G176000' => 'gma', 'Gohir.A01G063600' => 'ghi', 'Gohir.A01G170301' => 'ghi', 'Gohir.A02G060500' => 'ghi', 'Gohir.A05G133850' => 'ghi', 'Gohir.A05G161400' => 'ghi', 'Gohir.A06G012900' => 'ghi', 'Gohir.A06G035901' => 'ghi', 'Gohir.A06G127100' => 'ghi', 'Gohir.A06G210500' => 'ghi', 'Gohir.A08G008650' => 'ghi', 'Gohir.A09G072700' => 'ghi', 'Gohir.A09G088301' => 'ghi', 'Gohir.A10G040600' => 'ghi', 'Gohir.A12G036300' => 'ghi', 'Gohir.A12G143350' => 'ghi', 'Gohir.A12G165500' => 'ghi', 'Gohir.A13G145700' => 'ghi', 'Gohir.D01G050000' => 'ghi', 'Gohir.D01G051366' => 'ghi', 'Gohir.D01G161350' => 'ghi', 'Gohir.D02G065900' => 'ghi', 'Gohir.D05G164200' => 'ghi', 'Gohir.D05G355500' => 'ghi', 'Gohir.D06G010400' => 'ghi', 'Gohir.D06G111250' => 'ghi', 'Gohir.D06G132000' => 'ghi', 'Gohir.D06G210500' => 'ghi', 'Gohir.D07G165675' => 'ghi', 'Gohir.D08G062240' => 'ghi', 'Gohir.D08G086101' => 'ghi', 'Gohir.D08G138060' => 'ghi', 'Gohir.D09G072300' => 'ghi', 'Gohir.D10G041400' => 'ghi', 'Gohir.D11G191020' => 'ghi', 'Gohir.D11G212066' => 'ghi', 'Gohir.D12G036300' => 'ghi', 'Gohir.D12G168600' => 'ghi', 'Gohir.D13G150600' => 'ghi', 'Gorai.001G057300' => 'gra', 'Gorai.002G069900' => 'gra', 'Gorai.002G200000' => 'gra', 'Gorai.003G067600' => 'gra', 'Gorai.005G074800' => 'gra', 'Gorai.006G087300' => 'gra', 'Gorai.008G037500' => 'gra', 'Gorai.008G181400' => 'gra', 'Gorai.009G169400' => 'gra', 'Gorai.009G387900' => 'gra', 'Gorai.010G013300' => 'gra', 'Gorai.010G153800' => 'gra', 'Gorai.010G255800' => 'gra', 'Gorai.011G043700' => 'gra', 'Gorai.011G198900' => 'gra', 'Gorai.013G168400' => 'gra', 'GSVIVG01005212001' => 'vvi', 'GSVIVG01006163001' => 'vvi', 'GSVIVG01009625001' => 'vvi', 'GSVIVG01014338001' => 'vvi', 'GSVIVG01020005001' => 'vvi', 'GSVIVG01021450001' => 'vvi', 'GSVIVG01023975001' => 'vvi', 'GSVIVG01034490001' => 'vvi', 'HanXRQChr04g0112071' => 'han', 'HanXRQChr05g0131151' => 'han', 'HanXRQChr09g0262371' => 'han', 'HanXRQChr09g0268401' => 'han', 'HanXRQChr10g0279241' => 'han', 'HanXRQChr10g0297961' => 'han', 'HanXRQChr11g0326231' => 'han', 'HanXRQChr11g0328471' => 'han', 'HanXRQChr16g0507941' => 'han', 'HanXRQChr17g0560211' => 'han', 'Haze_02108' => 'cav', 'Haze_02428' => 'cav', 'Haze_05593' => 'cav', 'Haze_06448' => 'cav', 'Haze_09427' => 'cav', 'Haze_12022' => 'cav', 'Haze_17612' => 'cav', 'Haze_17928' => 'cav', 'Hma1.2p1_0032F.1_g019250' => 'hma', 'Hma1.2p1_0163F.1_g072690' => 'hma', 'Hma1.2p1_0265F.1_g106710' => 'hma', 'Hma1.2p1_0286F.1_g113970' => 'hma', 'Hma1.2p1_0363F.1_g136640' => 'hma', 'Hma1.2p1_0584F.1_g183470' => 'hma', 'Hma1.2p1_0885F.1_g232570' => 'hma', 'HPP92_006022' => 'vpl', 'HPP92_007320' => 'vpl', 'HPP92_011521' => 'vpl', 'HPP92_019387' => 'vpl', 'HPP92_024038' => 'vpl', 'Hund05891' => 'sun', 'Hund06450' => 'sun', 'Hund12053' => 'sun', 'Hund16800' => 'sun', 'Hund21222' => 'sun', 'Hund22896' => 'sun', 'Hund23746' => 'sun', 'Hund27083' => 'sun', 'Lalb_Chr02g0141831' => 'lal', 'Lalb_Chr02g0141841' => 'lal', 'Lalb_Chr05g0220411' => 'lal', 'Lalb_Chr06g0162081' => 'lal', 'Lalb_Chr09g0327651' => 'lal', 'Lalb_Chr13g0295051' => 'lal', 'Lalb_Chr15g0086801' => 'lal', 'Lalb_Chr16g0383781' => 'lal', 'Lalb_Chr16g0383791' => 'lal', 'Lalb_Chr18g0055441' => 'lal', 'Lalb_Chr18g0059611' => 'lal', 'Lalb_Chr20g0109661' => 'lal', 'Lalb_Chr20g0109831' => 'lal', 'Lalb_Chr20g0121871' => 'lal', 'Lalb_Chr22g0355361' => 'lal', 'Lalb_Chr25g0286371' => 'lal', 'Lj1A1187G43' => 'lonja', 'Lj1A1205T50' => 'lonja', 'Lj1A800G33' => 'lonja', 'Lj1C1187T7' => 'lonja', 'Lj1C843T11' => 'lonja', 'Lj1g0010940' => 'lja', 'Lj2A288T69' => 'lonja', 'Lj3g0024276' => 'lja', 'Lj4A47T76' => 'lonja', 'Lj4g0005805' => 'lja', 'Lj4g0006097' => 'lja', 'Lj4g0008528' => 'lja', 'Lj4g0024907' => 'lja', 'Lj5g0012472' => 'lja', 'Lj5g0018648' => 'lja', 'Lj6C789G1' => 'lonja', 'Lj6g0004000' => 'lja', 'Lj7A292G67' => 'lonja', 'Lj7A292T64' => 'lonja', 'Lj9A400T58' => 'lonja', 'Lsat_1_v5_gn_1_126181' => 'lsa', 'Lsat_1_v5_gn_4_123041' => 'lsa', 'Lsat_1_v5_gn_4_133620' => 'lsa', 'Lsat_1_v5_gn_4_53221' => 'lsa', 'Lsat_1_v5_gn_4_71961' => 'lsa', 'Lsat_1_v5_gn_7_105241' => 'lsa', 'Lsat_1_v5_gn_7_21361' => 'lsa', 'Lsat_1_v5_gn_7_28860' => 'lsa', 'Lsat_1_v5_gn_7_31260' => 'lsa', 'Lsat_1_v5_gn_8_52801' => 'lsa', 'Manes.02G191400' => 'mes', 'Manes.03G110100' => 'mes', 'Manes.04G071100' => 'mes', 'Manes.05G100500' => 'mes', 'Manes.05G164700' => 'mes', 'Manes.15G087000' => 'mes', 'Manes.15G121500' => 'mes', 'Manes.16G028300' => 'mes', 'Manes.17G046100' => 'mes', 'Manes.17G069800' => 'mes', 'Manes.18G100500' => 'mes', 'Mapoly0002s0109' => 'mpo', 'Mapoly0024s0007' => 'mpo', 'Mapoly0089s0032' => 'mpo', 'MBI04_g42241_MAGBIO' => 'mbi', 'MBI05_g11988_MAGBIO' => 'mbi', 'MBI05_g35452_MAGBIO' => 'mbi', 'MBI07_g30179_MAGBIO' => 'mbi', 'MBI07_g35859_MAGBIO' => 'mbi', 'MBI07_g35860_MAGBIO' => 'mbi', 'MBI07_g37166_MAGBIO' => 'mbi', 'MBI08_g18172_MAGBIO' => 'mbi', 'MBI09_g08441_MAGBIO' => 'mbi', 'MBI13_g01676_MAGBIO' => 'mbi', 'MBI14_g42955_MAGBIO' => 'mbi', 'MBI16_g13161_MAGBIO' => 'mbi', 'MBI17_g27204_MAGBIO' => 'mbi', 'MBI19_g21595_MAGBIO' => 'mbi', 'MD00G1148400' => 'mdo', 'MD02G1301200' => 'mdo', 'MD03G1227800' => 'mdo', 'MD05G1041100' => 'mdo', 'MD05G1124800' => 'mdo', 'MD05G1284000' => 'mdo', 'MD05G1338800' => 'mdo', 'MD05G1338900' => 'mdo', 'MD07G1022800' => 'mdo', 'MD10G1047500' => 'mdo', 'MD10G1127500' => 'mdo', 'MD10G1262300' => 'mdo', 'MD10G1293800' => 'mdo', 'MD16G1074300' => 'mdo', 'Medtr1g021670' => 'mtr', 'Medtr1g096320' => 'mtr', 'Medtr2g013690' => 'mtr', 'Medtr2g019450' => 'mtr', 'Medtr2g085170' => 'mtr', 'Medtr4g088785' => 'mtr', 'Medtr8g055930' => 'mtr', 'Medtr8g085850' => 'mtr', 'MELO3C002605.2' => 'cme', 'MELO3C003891.2' => 'cme', 'MELO3C004012.2' => 'cme', 'MELO3C007134.2' => 'cme', 'MELO3C008118.2' => 'cme', 'MELO3C016700.2' => 'cme', 'MELO3C024127.2' => 'cme', 'MELO3C033361.2' => 'cme', 'MELO3C033362.2' => 'cme', 'Migut.C00430' => 'egut', 'Migut.C01246' => 'egut', 'Migut.E00101' => 'egut', 'Migut.H01486' => 'egut', 'Migut.H01939' => 'egut', 'Migut.K00360' => 'egut', 'Migut.M00910' => 'egut', 'Migut.M01139' => 'egut', 'Migut.N02677' => 'egut', 'MSTRG.13252' => 'ama', 'MSTRG.14701' => 'ama', 'MSTRG.1521' => 'ama', 'MSTRG.15884' => 'ama', 'MSTRG.16242' => 'ama', 'MSTRG.22285' => 'ama', 'MSTRG.22444' => 'ama', 'MSTRG.2349' => 'ama', 'MSTRG.26308' => 'ama', 'MSTRG.28296' => 'ama', 'MSTRG.9895' => 'ama', 'Nitab4.5_0000110g0060' => 'nta', 'Nitab4.5_0000420g0130' => 'nta', 'Nitab4.5_0000422g0030' => 'nta', 'Nitab4.5_0000560g0180' => 'nta', 'Nitab4.5_0000703g0100' => 'nta', 'Nitab4.5_0000786g0200' => 'nta', 'Nitab4.5_0001336g0020' => 'nta', 'Nitab4.5_0001796g0030' => 'nta', 'Nitab4.5_0003348g0060' => 'nta', 'Nitab4.5_0003698g0040' => 'nta', 'Nitab4.5_0003942g0090' => 'nta', 'Nitab4.5_0004775g0070' => 'nta', 'Nitab4.5_0004864g0030' => 'nta', 'Nitab4.5_0005615g0020' => 'nta', 'Nitab4.5_0009288g0030' => 'nta', 'Nitab4.5_0009341g0010' => 'nta', 'Nitab4.5_0009535g0010' => 'nta', 'Nn1g03995' => 'nnu', 'Nn1g04100' => 'nnu', 'Nn1g06530' => 'nnu', 'Nn3g16404' => 'nnu', 'Nn3g17212' => 'nnu', 'Nn3g20776' => 'nnu', 'Nn3g21923' => 'nnu', 'Nn5g27737' => 'nnu', 'Nn5g29461' => 'nnu', 'Nn7g38355' => 'nnu', 'Nn8g39873' => 'nnu', 'Oeu000548.2' => 'oeu', 'Oeu004672.1' => 'oeu', 'Oeu015605.2' => 'oeu', 'Oeu016092.1' => 'oeu', 'Oeu017879.3' => 'oeu', 'Oeu024910.1' => 'oeu', 'Oeu028965.1' => 'oeu', 'Oeu031269.1' => 'oeu', 'Oeu031270.1' => 'oeu', 'Oeu032535.1' => 'oeu', 'Oeu034151.1' => 'oeu', 'Oeu034152.1' => 'oeu', 'Oeu034588.2' => 'oeu', 'Oeu050846.1' => 'oeu', 'Oeu050849.2' => 'oeu', 'Oeu051063.2' => 'oeu', 'Oeu052368.1' => 'oeu', 'Oeu052370.1' => 'oeu', 'Os01g0210400' => 'osa', 'Os01g0304300' => 'osa', 'Os01g0749100' => 'osa', 'Os02g0745800' => 'osa', 'Os03g0769050' => 'osa', 'Os05g0531500' => 'osa', 'Os06g0724300' => 'osa', 'Os11g0198100' => 'osa', 'Peaxi162Scf00069g01425' => 'pax', 'Peaxi162Scf00280g00811' => 'pax', 'Peaxi162Scf00310g00615' => 'pax', 'Peaxi162Scf00362g00542' => 'pax', 'Peaxi162Scf00461g00310' => 'pax', 'Peaxi162Scf00530g00118' => 'pax', 'Peaxi162Scf00541g00057' => 'pax', 'Peaxi162Scf00661g00017' => 'pax', 'Peaxi162Scf00926g00027' => 'pax', 'Peaxi162Scf01064g00263' => 'pax', 'Peaxi162Scf01211g00135' => 'pax', 'PGR004G2336' => 'pgr', 'PGR042G0327' => 'pgr', 'PGR042G1957' => 'pgr', 'PGR042G2003' => 'pgr', 'PGR042G3929' => 'pgr', 'PGR083G1137' => 'pgr', 'PGR083G1364' => 'pgr', 'PGSC0003DMG400003381' => 'stu', 'PGSC0003DMG400003417' => 'stu', 'PGSC0003DMG400008981' => 'stu', 'PGSC0003DMG400012417' => 'stu', 'PGSC0003DMG400012823' => 'stu', 'PGSC0003DMG400016885' => 'stu', 'PGSC0003DMG400022812' => 'stu', 'PGSC0003DMG400029726' => 'stu', 'PGSC0003DMG401009243' => 'stu', 'PGSC0003DMG401031505' => 'stu', 'PGSC0003DMG402031505' => 'stu', 'Phvul.001G017600' => 'pvu', 'Phvul.002G193500' => 'pvu', 'Phvul.002G228900' => 'pvu', 'Phvul.002G236800' => 'pvu', 'Phvul.003G049500' => 'pvu', 'Phvul.005G072000' => 'pvu', 'Phvul.006G164800' => 'pvu', 'Phvul.006G185100' => 'pvu', 'Phvul.007G090000' => 'pvu', 'Potri.001G399800' => 'ptr', 'Potri.002G149900' => 'ptr', 'Potri.004G044100' => 'ptr', 'Potri.004G177600' => 'ptr', 'Potri.009G138000' => 'ptr', 'Potri.010G094000' => 'ptr', 'Potri.011G053000' => 'ptr', 'Potri.011G119300' => 'ptr', 'Potri.013G113700' => 'ptr', 'Potri.018G107800' => 'ptr', 'Potri.019G084100' => 'ptr', 'Pp3c14_23720' => 'ppa', 'Pp3c16_6340' => 'ppa', 'Pp3c23_13420' => 'ppa', 'Pp3c24_2740' => 'ppa', 'Pp3c25_860' => 'ppa', 'Pp3c8_21750' => 'ppa', 'Prupe.1G273000' => 'ppe', 'Prupe.1G273700' => 'ppe', 'Prupe.1G274100' => 'ppe', 'Prupe.2G023300' => 'ppe', 'Prupe.4G048000' => 'ppe', 'Prupe.4G080400' => 'ppe', 'Prupe.4G181200' => 'ppe', 'Prupe.8G056900' => 'ppe', 'Prupe.8G168700' => 'ppe', 'Psat1g189080' => 'psa', 'Psat1g204760' => 'psa', 'Psat4g175560' => 'psa', 'Psat4g177720' => 'psa', 'Psat5g244240' => 'psa', 'Psat6g010720' => 'psa', 'Psat6g187200' => 'psa', 'Psat7g072040' => 'psa', 'PSO017G3501' => 'pso', 'PSO063G2148' => 'pso', 'PSO063G5608' => 'pso', 'PSO210G6392' => 'pso', 'PSO541G2319' => 'pso', 'PSO541G2836' => 'pso', 'PSO541G4012' => 'pso', 'PSO541G6253' => 'pso', 'PSO675G0580' => 'pso', 'PSO675G0856' => 'pso', 'PSO675G5635' => 'pso', 'PSO675G9157' => 'pso', 'PSO832G1660' => 'pso', 'PSO832G1969' => 'pso', 'QL02p007186' => 'qlo', 'QL02p033904' => 'qlo', 'QL03p064391' => 'qlo', 'QL05p040593' => 'qlo', 'QL05p058242' => 'qlo', 'QL08p021825' => 'qlo', 'QL11p004981' => 'qlo', 'RcHm_v2.0_Chr1g0318301' => 'rch', 'RcHm_v2.0_Chr4g0418501' => 'rch', 'RcHm_v2.0_Chr4g0439971' => 'rch', 'RcHm_v2.0_Chr5g0008541' => 'rch', 'RcHm_v2.0_Chr5g0014101' => 'rch', 'RcHm_v2.0_Chr5g0014131' => 'rch', 'RcHm_v2.0_Chr5g0033621' => 'rch', 'RcHm_v2.0_Chr6g0272041' => 'rch', 'RcHm_v2.0_Chr6g0278831' => 'rch', 'Rhsim02G0130400' => 'rsi', 'Rhsim02G0171100' => 'rsi', 'Rhsim05G0053000' => 'rsi', 'Rhsim05G0053100' => 'rsi', 'Rhsim06G0096500' => 'rsi', 'Rhsim06G0096600' => 'rsi', 'Rhsim06G0199100' => 'rsi', 'Rhsim12G0062300' => 'rsi', 'Rhsim12G0062800' => 'rsi', 'Sabra02G0118600' => 'sbr', 'Sabra04G0027300' => 'sbr', 'Sabra04G0119500' => 'sbr', 'Sabra08G0112500' => 'sbr', 'Sabra11G0036800' => 'sbr', 'Sabra11G0103800' => 'sbr', 'Sabra13G0096300' => 'sbr', 'Sabra16G0262300' => 'sbr', 'Sabra18G0091700' => 'sbr', 'Sabra19G0095400' => 'sbr', 'SalBow6G3080' => 'sbo', 'SalBow7G1157' => 'sbo', 'SalBow7G2123' => 'sbo', 'SalBow7G2285' => 'sbo', 'SalBow7G3537' => 'sbo', 'SalBow8G2947' => 'sbo', 'SalBow8G4463' => 'sbo', 'SalBow8G5466' => 'sbo', 'Sc01g0001750' => 'sci', 'Sc02g0006640' => 'sci', 'Sc02g0006670' => 'sci', 'Sc04g0008220' => 'sci', 'Sc05g0006190' => 'sci', 'Sc08g0002760' => 'sci', 'Sc17g0006170' => 'sci', 'Sc22g0002050' => 'sci', 'Sc23g0001190' => 'sci', 'Sc24g0000980' => 'sci', 'Sed0006245' => 'sed', 'Sed0007543' => 'sed', 'Sed0009411' => 'sed', 'Sed0010765' => 'sed', 'Sed0012944' => 'sed', 'Sed0014682' => 'sed', 'Sed0016174' => 'sed', 'Sed0016796' => 'sed', 'Sed0020317' => 'sed', 'Sed0021467' => 'sed', 'SEGI_01316' => 'sgi', 'SEGI_03374' => 'sgi', 'SEGI_16265' => 'sgi', 'SEGI_18569' => 'sgi', 'SEGI_20351' => 'sgi', 'SEGI_26395' => 'sgi', 'SEGI_29469' => 'sgi', 'SEGI_34771' => 'sgi', 'SEGI_36769' => 'sgi', 'SEGI_37139' => 'sgi', 'SGA_v2.0_scaffold100G29687' => 'sas', 'SGA_v2.0_scaffold118G32472' => 'sas', 'SGA_v2.0_scaffold14G07051' => 'sas', 'SGA_v2.0_scaffold183G39845' => 'sas', 'SGA_v2.0_scaffold1G00174' => 'sas', 'SGA_v2.0_scaffold22G09714' => 'sas', 'SGA_v2.0_scaffold333G48992' => 'sas', 'SGA_v2.0_scaffold46G17491' => 'sas', 'SGA_v2.0_scaffold49G18294' => 'sas', 'SGA_v2.0_scaffold63G21658' => 'sas', 'SHI01741' => 'shi', 'SHI05771' => 'shi', 'SHI18077' => 'shi', 'SHI20525' => 'shi', 'SHI20527' => 'shi', 'SHI20528' => 'shi', 'SMO172G0185' => 'smo', 'SMO198G0020' => 'smo', 'SMO351G0006' => 'smo', 'SMO356G0118' => 'smo', 'SMO358G0296' => 'smo', 'SMO367G0079' => 'smo', 'SMO367G1277' => 'smo', 'Solyc01g014220.3' => 'sly', 'Solyc01g111770.2' => 'sly', 'Solyc02g078180.3' => 'sly', 'Solyc03g006430.3' => 'sly', 'Solyc03g006456.1' => 'sly', 'Solyc03g079860.2' => 'sly', 'Solyc04g079770.3' => 'sly', 'Solyc05g007430.4' => 'sly', 'Solyc07g063150.3' => 'sly', 'Solyc08g016620.3' => 'sly', 'Solyc09g057590.3' => 'sly', 'Solyc09g057600.1' => 'sly', 'Solyc10g009050.3' => 'sly', 'Solyc11g017420.2' => 'sly', 'Sopen01g053810' => 'spe', 'Sopen02g023040' => 'spe', 'Sopen03g002440' => 'spe', 'Sopen04g033350' => 'spe', 'Sopen05g003310' => 'spe', 'Sopen07g004050' => 'spe', 'Sopen07g031340' => 'spe', 'Sopen08g006990' => 'spe', 'Sopen10g004830' => 'spe', 'Sopen11g009370' => 'spe', 'Sp1g24450' => 'spa', 'Sp1g29670' => 'spa', 'Sp1g39600' => 'spa', 'Sp2g11080' => 'spa', 'Sp2g13970' => 'spa', 'Sp4g16130' => 'spa', 'Sp6g13080' => 'spa', 'Sp7g37270' => 'spa', 'TAR371G0065' => 'tar', 'TAR376G0340' => 'tar', 'TAR376G0435' => 'tar', 'TAR381G0002' => 'tar', 'TAR381G1236' => 'tar', 'TAR624G0055' => 'tar', 'TAR624G0324' => 'tar', 'TAR624G0696' => 'tar', 'TAR624G0906' => 'tar', 'TAR625G0107' => 'tar', 'TAR626G0015' => 'tar', 'TAR626G1356' => 'tar', 'TAR627G0888' => 'tar', 'TAR628G0399' => 'tar', 'TAR628G1327' => 'tar', 'TAR629G2831' => 'tar', 'TAR629G2874' => 'tar', 'TAR633G1432' => 'tar', 'TAR633G2771' => 'tar', 'THA.LOC104803394' => 'tha', 'THA.LOC104805153' => 'tha', 'THA.LOC104806784' => 'tha', 'THA.LOC104810473' => 'tha', 'THA.LOC104813100' => 'tha', 'THA.LOC104814215' => 'tha', 'THA.LOC104815554' => 'tha', 'THA.LOC104820544' => 'tha', 'THA.LOC104824754' => 'tha', 'THA.LOC104827717' => 'tha', 'Thecc.02G031400' => 'tca', 'Thecc.02G055900' => 'tca', 'Thecc.02G350800' => 'tca', 'Thecc.06G150900' => 'tca', 'Thecc.06G186600' => 'tca', 'Thecc.07G089600' => 'tca', 'Thecc.08G020400' => 'tca', 'Thecc.08G182100' => 'tca', 'Thhalv10000873m.g' => 'esa', 'Thhalv10004185m.g' => 'esa', 'Thhalv10006981m.g' => 'esa', 'Thhalv10007204m.g' => 'esa', 'Thhalv10011374m.g' => 'esa', 'Thhalv10013482m.g' => 'esa', 'Thhalv10017801m.g' => 'esa', 'Thhalv10024983m.g' => 'esa', 'TPR.G12072' => 'tpr', 'TPR.G15769' => 'tpr', 'TPR.G16504' => 'tpr', 'TPR.G16506' => 'tpr', 'TPR.G24345' => 'tpr', 'TPR.G26666' => 'tpr', 'TPR.G27320' => 'tpr', 'TPR.G31819' => 'tpr', 'TPR.G38879' => 'tpr', 'TPR.G39015' => 'tpr', 'TPR.G8819' => 'tpr', 'TWI09G0924' => 'twi', 'TWI12G0811' => 'twi', 'TWI12G1294' => 'twi', 'TWI31G0150' => 'twi', 'TWI36G1262' => 'twi', 'TWI38G1287' => 'twi', 'TWI38G1633' => 'twi', 'TWI38G1982' => 'twi', 'TWI39G0116' => 'twi', 'TWI60G1011' => 'twi', 'TWI63G0171' => 'twi', 'TWI73G0839' => 'twi', 'TWI79G1511' => 'twi', 'unitig_0.g915' => 'ugi', 'unitig_0.g916' => 'ugi', 'unitig_21.g20219' => 'ugi', 'unitig_21.g20416' => 'ugi', 'unitig_578.g16132' => 'ugi', 'unitig_578.g16718' => 'ugi', 'unitig_62.g23481' => 'ugi', 'unitig_744.g24535' => 'ugi', 'unitig_749.g13525' => 'ugi', 'vmacro01248' => 'vma', 'vmacro02290' => 'vma', 'vmacro10946' => 'vma', 'vmacro11865' => 'vma', 'vmacro12493' => 'vma', 'vmacro17322' => 'vma', 'vmacro21599' => 'vma', 'vmacro23041' => 'vma', 'VMungo0251G0004' => 'vmu', 'VMungo0251G2639' => 'vmu', 'VMungo0251G2967' => 'vmu', 'VMungo0540G0864' => 'vmu', 'VMungo0540G1569' => 'vmu', 'VMungo0647G0317' => 'vmu', 'VMungo0720G1373' => 'vmu', 'VMungo0720G1508' => 'vmu', 'VMungo1080G0485' => 'vmu', 'VMungo1215G3177' => 'vmu', 'Zm00001eb112600' => 'zma', 'Zm00001eb120220' => 'zma', 'Zm00001eb153240' => 'zma', 'Zm00001eb168880' => 'zma', 'Zm00001eb213920' => 'zma', 'Zm00001eb228280' => 'zma', 'Zm00001eb254580' => 'zma', 'Zm00001eb272180' => 'zma', 'Zm00001eb293190' => 'zma', 'Zm00001eb322930' => 'zma', 'Zm00001eb353360' => 'zma', 'Zm00001eb353390' => 'zma', 'Zm00001eb353430' => 'zma', 'Zm00001eb353440' => 'zma', 'Zm00001eb353780' => 'zma' ), 'gf_id' => 'HOM05D000499', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000499' ), 'data_identifier' => 'HOM05D000499', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000499', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1066', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p29780' => 'bna', 'A02p33180' => 'bna', 'A03p16470' => 'bna', 'A03p66010' => 'bna', 'A04p25970' => 'bna', 'A06p01270' => 'bna', 'A06p46080' => 'bna', 'A07p11400' => 'bna', 'A08p01840' => 'bna', 'A08p08230' => 'bna', 'A08p25740' => 'bna', 'A09p32070' => 'bna', 'A09p37830' => 'bna', 'A09p42840' => 'bna', 'A09p42850' => 'bna', 'Aa31LG10G2060' => 'aar', 'Aa31LG2G7410' => 'aar', 'Aa31LG6G10200' => 'aar', 'Aa31LG6G16680' => 'aar', 'Aa31LG6G8470' => 'aar', 'Aa31LG9G12730' => 'aar', 'Aa31LG9G13680' => 'aar', 'Aa31LG9G14920' => 'aar', 'Aa31LG9G6650' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4977' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5467' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3254' => 'aag', 'Actinidia02578' => 'ach', 'Actinidia07693' => 'ach', 'Actinidia08413' => 'ach', 'Actinidia08414' => 'ach', 'Actinidia15289' => 'ach', 'Actinidia19871' => 'ach', 'Actinidia21475' => 'ach', 'Actinidia22576' => 'ach', 'Actinidia28327' => 'ach', 'Actinidia32491' => 'ach', 'Actinidia39463' => 'ach', 'Actinidia39571' => 'ach', 'Ah.01g013750' => 'amhyb', 'Ah.01g023210' => 'amhyb', 'Ah.04g164850' => 'amhyb', 'Ah.05g178060' => 'amhyb', 'Ah.07g204270' => 'amhyb', 'Ah.07g208480' => 'amhyb', 'Ah.09g237410' => 'amhyb', 'Ah.14g089460' => 'amhyb', 'AL1G41790' => 'aly', 'AL1G49050' => 'aly', 'AL1G53810' => 'aly', 'AL1G61400' => 'aly', 'AL4G18580' => 'aly', 'AL5G12510' => 'aly', 'AL5G12540' => 'aly', 'AL6G43230' => 'aly', 'AL7G10370' => 'aly', 'AL7G19250' => 'aly', 'AL8G12240' => 'aly', 'AL8G18540' => 'aly', 'Aqoxy1G02409' => 'aox', 'Aqoxy2G03993' => 'aox', 'Aqoxy3G03357' => 'aox', 'Aqoxy4G00785' => 'aox', 'Aqoxy5G02598' => 'aox', 'Aqoxy6G00132' => 'aox', 'Aqoxy7G01776' => 'aox', 'Aqoxy7G02316' => 'aox', 'Aqoxy7G03973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.12AFKW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B8730' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27IQR1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3F75VG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3RE0GA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41TCQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.527VTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FIR39' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5W8UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DA38EV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ63HS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H1I32C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HC27T5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4M8AP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7N3CZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9UVDZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LS1NQA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT1D4B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SKC4TM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCFV76' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF9Q1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQWD9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1ZM88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WE07RT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YCK7VH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJE6Q6' => 'arhy', 'AT1G28240' => 'ath', 'AT1G34550' => 'ath', 'AT1G53040' => 'ath', 'AT2G02910' => 'ath', 'AT4G09630' => 'ath', 'AT4G38500' => 'ath', 'AT5G42660' => 'ath', 'AT5G46220' => 'ath', 'ATR0152G026' => 'atr', 'ATR0564G343' => 'atr', 'ATR0706G151' => 'atr', 'ATR0733G207' => 'atr', 'ATR0751G234' => 'atr', 'ATR0807G048' => 'atr', 'ATR1091G084' => 'atr', 'Atru.chr10.1229' => 'acertr', 'Atru.chr10.1230' => 'acertr', 'Atru.chr10.1874' => 'acertr', 'Atru.chr11.1808' => 'acertr', 'Atru.chr13.1795' => 'acertr', 'Atru.chr13.570' => 'acertr', 'Atru.chr2.2608' => 'acertr', 'Atru.chr2.2609' => 'acertr', 'Atru.chr5.3428' => 'acertr', 'Atru.chr8.1171' => 'acertr', 'AUR62004651' => 'cqu', 'AUR62008675' => 'cqu', 'AUR62010014' => 'cqu', 'AUR62013004' => 'cqu', 'AUR62014825' => 'cqu', 'AUR62015015' => 'cqu', 'AUR62015151' => 'cqu', 'AUR62017020' => 'cqu', 'AUR62019422' => 'cqu', 'AUR62023570' => 'cqu', 'AUR62025571' => 'cqu', 'AUR62029098' => 'cqu', 'AUR62033863' => 'cqu', 'AUR62034296' => 'cqu', 'AUR62040075' => 'cqu', 'BcaB02g07334' => 'bca', 'BcaB02g10575' => 'bca', 'BcaB03g12119' => 'bca', 'BcaB03g12120' => 'bca', 'BcaB03g13945' => 'bca', 'BcaB04g17123' => 'bca', 'BcaB04g17867' => 'bca', 'BcaB04g19839' => 'bca', 'BcaB07g30317' => 'bca', 'BcaB07g32432' => 'bca', 'BcaB07g33362' => 'bca', 'BcaB08g36611' => 'bca', 'BcaC01g00028' => 'bca', 'BcaC01g01356' => 'bca', 'BcaC01g02034' => 'bca', 'BcaC01g06051' => 'bca', 'BcaC03g16839' => 'bca', 'BcaC03g17176' => 'bca', 'BcaC05g26829' => 'bca', 'BcaC06g31490' => 'bca', 'BcaC06g35344' => 'bca', 'BcaC06g36570' => 'bca', 'BcaC07g37537' => 'bca', 'BcaC08g43491' => 'bca', 'BcaC08g43773' => 'bca', 'BcaNung00234' => 'bca', 'BcaNung01982' => 'bca', 'BcaNung03707' => 'bca', 'BcaNung06454' => 'bca', 'BolC2t10762H' => 'bol', 'BolC2t11191H' => 'bol', 'BolC3t14322H' => 'bol', 'BolC3t19747H' => 'bol', 'BolC3t21425H' => 'bol', 'BolC4t27800H' => 'bol', 'BolC5t31423H' => 'bol', 'BolC6t35951H' => 'bol', 'BolC6t36282H' => 'bol', 'BolC7t40678H' => 'bol', 'BolC7t40679H' => 'bol', 'BolC7t42222H' => 'bol', 'BolC7t43492H' => 'bol', 'BolC7t46785H' => 'bol', 'BolC8t47853H' => 'bol', 'BolC9t56805H' => 'bol', 'BraA02t08000Z' => 'bra', 'BraA02t08341Z' => 'bra', 'BraA03t10936Z' => 'bra', 'BraA03t15657Z' => 'bra', 'BraA04t18100Z' => 'bra', 'BraA05t20523Z' => 'bra', 'BraA06t23353Z' => 'bra', 'BraA06t27473Z' => 'bra', 'BraA06t27769Z' => 'bra', 'BraA07t28928Z' => 'bra', 'BraA08t32236Z' => 'bra', 'BraA08t32841Z' => 'bra', 'BraA08t34524Z' => 'bra', 'BraA09t38742Z' => 'bra', 'BraA09t39295Z' => 'bra', 'C02p47180' => 'bna', 'C02p50990' => 'bna', 'C03p19360' => 'bna', 'C03p74950' => 'bna', 'C03p91000' => 'bna', 'C04p63260' => 'bna', 'C05p27050' => 'bna', 'C06p08750' => 'bna', 'C06p11490' => 'bna', 'C07p02820' => 'bna', 'C07p17180' => 'bna', 'C07p29440' => 'bna', 'C07p63730' => 'bna', 'C09p39260' => 'bna', 'CAN.G1164.34' => 'can', 'CAN.G1164.39' => 'can', 'CAN.G1530.3' => 'can', 'CAN.G162.61' => 'can', 'CAN.G176.6' => 'can', 'CAN.G289.49' => 'can', 'CAN.G370.21' => 'can', 'CAN.G370.22' => 'can', 'CAN.G371.117' => 'can', 'CAN.G58.37' => 'can', 'CAN.G588.98' => 'can', 'CANSAT21G2266' => 'cansat', 'CANSAT25G2799' => 'cansat', 'CANSAT35G0862' => 'cansat', 'CANSAT35G1704' => 'cansat', 'CANSAT35G1760' => 'cansat', 'CANSAT56G3971' => 'cansat', 'CANSAT56G4116' => 'cansat', 'CANSAT80G1259' => 'cansat', 'CARHR027730' => 'chi', 'CARHR033880' => 'chi', 'CARHR043270' => 'chi', 'CARHR145330' => 'chi', 'CARHR145340' => 'chi', 'CARHR175570' => 'chi', 'CARHR181570' => 'chi', 'CARHR258470' => 'chi', 'CARHR260490' => 'chi', 'CARHR294220' => 'chi', 'Carub.0001s2668' => 'cru', 'Carub.0001s3257' => 'cru', 'Carub.0001s4220' => 'cru', 'Carub.0005s0179' => 'cru', 'Carub.0006s2807' => 'cru', 'Carub.0007s0039' => 'cru', 'Carub.0008s0169' => 'cru', 'Carub.0008s0636' => 'cru', 'Ca_00338_v3' => 'car', 'Ca_00542_v3' => 'car', 'Ca_01844_v3' => 'car', 'Ca_10611_v3' => 'car', 'Ca_13326_v3' => 'car', 'Ca_17944_v3' => 'car', 'Ca_18546_v3' => 'car', 'Ca_24219_v3' => 'car', 'Ca_29972_v3' => 'car', 'CBR_g3681' => 'cbr', 'CBR_g40021' => 'cbr', 'Cc01_g08140' => 'ccan', 'Cc02_g13410' => 'ccan', 'Cc02_g37480' => 'ccan', 'Cc05_g12030' => 'ccan', 'Cc09_g03370' => 'ccan', 'Cc09_g10300' => 'ccan', 'Cc10_g03530' => 'ccan', 'Cc10_g11380' => 'ccan', 'CDE01G0176' => 'cde', 'CDE02G0675' => 'cde', 'CDE02G0942' => 'cde', 'CDE02G1153' => 'cde', 'CDE02G4177' => 'cde', 'CDE04G2117' => 'cde', 'CDE04G2736' => 'cde', 'CDE08G1161' => 'cde', 'CDE09G1238' => 'cde', 'Cfa000467' => 'cfa', 'Cfa000947' => 'cfa', 'Cfa004969' => 'cfa', 'Cfa005284' => 'cfa', 'Cfa008993' => 'cfa', 'Cfa018187' => 'cfa', 'Cfa018454' => 'cfa', 'Cfa020585' => 'cfa', 'Ciclev10000424m.g' => 'ccl', 'Ciclev10003605m.g' => 'ccl', 'Ciclev10007828m.g' => 'ccl', 'Ciclev10014620m.g' => 'ccl', 'Ciclev10015169m.g' => 'ccl', 'Ciclev10018291m.g' => 'ccl', 'Ciclev10028256m.g' => 'ccl', 'Ciclev10033822m.g' => 'ccl', 'CiPaw.05G060300' => 'cil', 'CiPaw.05G085000' => 'cil', 'CiPaw.06G083700' => 'cil', 'CiPaw.06G120300' => 'cil', 'CiPaw.09G060500' => 'cil', 'CiPaw.09G123800' => 'cil', 'CiPaw.11G169700' => 'cil', 'CiPaw.12G118300' => 'cil', 'CiPaw.15G071000' => 'cil', 'CiPaw.15G081900' => 'cil', 'ClCG01G024610' => 'cla', 'ClCG03G006070' => 'cla', 'ClCG05G019250' => 'cla', 'ClCG09G009500' => 'cla', 'ClCG11G008200' => 'cla', 'ClCG11G018080' => 'cla', 'COL.COLO4_17373' => 'col', 'COL.COLO4_22994' => 'col', 'COL.COLO4_26389' => 'col', 'COL.COLO4_27170' => 'col', 'COL.COLO4_31074' => 'col', 'COL.COLO4_31465' => 'col', 'COL.COLO4_36438' => 'col', 'COL.COLO4_36439' => 'col', 'Cpa.g.c38781' => 'cpa', 'Cpa.g.sc128.12' => 'cpa', 'Cpa.g.sc166.7' => 'cpa', 'Cpa.g.sc166.8' => 'cpa', 'Cpa.g.sc20.111' => 'cpa', 'Cpa.g.sc27.31' => 'cpa', 'Cpa.g.sc64.36' => 'cpa', 'Cpa.g.sc64.37' => 'cpa', 'Cpa.g.sc66.49' => 'cpa', 'Cpa.g.sc80.64' => 'cpa', 'CsaV3_1G012320' => 'csa', 'CsaV3_2G008480' => 'csa', 'CsaV3_2G033450' => 'csa', 'CsaV3_3G044830' => 'csa', 'CsaV3_4G033710' => 'csa', 'CsaV3_6G051730' => 'csa', 'CsaV3_7G025350' => 'csa', 'CSS0001067' => 'camsi', 'CSS0005996' => 'camsi', 'CSS0006590' => 'camsi', 'CSS0009673' => 'camsi', 'CSS0010201' => 'camsi', 'CSS0010549' => 'camsi', 'CSS0011364' => 'camsi', 'CSS0014473' => 'camsi', 'CSS0014961' => 'camsi', 'CSS0020191' => 'camsi', 'CSS0021165' => 'camsi', 'CSS0022306' => 'camsi', 'CSS0030591' => 'camsi', 'CSS0030696' => 'camsi', 'CSS0032653' => 'camsi', 'CSS0037487' => 'camsi', 'CSS0041102' => 'camsi', 'CSS0041261' => 'camsi', 'CSS0046246' => 'camsi', 'CSS0049256' => 'camsi', 'DCAR_004075' => 'dca', 'DCAR_011538' => 'dca', 'DCAR_019553' => 'dca', 'DCAR_020952' => 'dca', 'DCAR_021739' => 'dca', 'DCAR_027407' => 'dca', 'DCAR_027913' => 'dca', 'DCAR_028066' => 'dca', 'Dinv05899' => 'din', 'Dinv07563' => 'din', 'Dinv08010' => 'din', 'Dinv14125' => 'din', 'Dinv20172' => 'din', 'Dinv30743' => 'din', 'Dinv31229' => 'din', 'Dinv34162' => 'din', 'Dinv36028' => 'din', 'Dinv39368' => 'din', 'Dinv40565' => 'din', 'Dinv41706' => 'din', 'Duzib052G0089' => 'dzi', 'Duzib116G0641' => 'dzi', 'Duzib132G0069' => 'dzi', 'Duzib132G1219' => 'dzi', 'Duzib147G0278' => 'dzi', 'Duzib160G0480' => 'dzi', 'Duzib170G0661' => 'dzi', 'Duzib177G0591' => 'dzi', 'Duzib187G1353' => 'dzi', 'Duzib192G0858' => 'dzi', 'Duzib192G0883' => 'dzi', 'Duzib213G0506' => 'dzi', 'Duzib235G0289' => 'dzi', 'Duzib251G0422' => 'dzi', 'ECA232G3898' => 'eca', 'ECA233G5950' => 'eca', 'ECA234G1699' => 'eca', 'ECA234G2421' => 'eca', 'ECA236G0426' => 'eca', 'ECA236G4331' => 'eca', 'ECA248G2573' => 'eca', 'EL10Ac1g00077' => 'bvu', 'EL10Ac1g01746' => 'bvu', 'EL10Ac2g03464' => 'bvu', 'EL10Ac4g08176' => 'bvu', 'EL10Ac7g17521' => 'bvu', 'EL10Ac8g20386' => 'bvu', 'EL10Ac9g21343' => 'bvu', 'EL10Ac9g22688' => 'bvu', 'Eucgr.B03434' => 'egr', 'Eucgr.D00618' => 'egr', 'Eucgr.E02395' => 'egr', 'Eucgr.F01129' => 'egr', 'Eucgr.F02622' => 'egr', 'Eucgr.F04207' => 'egr', 'FAN01G0570' => 'fan', 'FAN03G3351' => 'fan', 'FAN06G3702' => 'fan', 'FAN07G2149' => 'fan', 'FAN10G3758' => 'fan', 'FAN11G1170' => 'fan', 'FAN11G2050' => 'fan', 'FAN11G2724' => 'fan', 'FAN12G1700' => 'fan', 'FAN12G2028' => 'fan', 'FAN15G1160' => 'fan', 'FAN15G3063' => 'fan', 'FAN16G2540' => 'fan', 'FAN16G3077' => 'fan', 'FAN16G3624' => 'fan', 'FAN17G0221' => 'fan', 'FAN20G2492' => 'fan', 'FAN20G2905' => 'fan', 'FAN21G0548' => 'fan', 'FAN21G1300' => 'fan', 'FAN22G0077' => 'fan', 'FAN22G1315' => 'fan', 'FAN24G1280' => 'fan', 'FAN24G1445' => 'fan', 'FAN24G3527' => 'fan', 'FAN25G0464' => 'fan', 'FAN25G2885' => 'fan', 'FAN25G3270' => 'fan', 'FAN27G1101' => 'fan', 'FAN27G2846' => 'fan', 'FAN27G3524' => 'fan', 'FvH4_2g11770' => 'fve', 'FvH4_2g15630' => 'fve', 'FvH4_3g05570' => 'fve', 'FvH4_3g09110' => 'fve', 'FvH4_3g19940' => 'fve', 'FvH4_4g04821' => 'fve', 'FvH4_4g31480' => 'fve', 'FvH4_7g01740' => 'fve', 'Glyma.05G130400' => 'gma', 'Glyma.05G156400' => 'gma', 'Glyma.07G197000' => 'gma', 'Glyma.08G085151' => 'gma', 'Glyma.08G114500' => 'gma', 'Glyma.08G300400' => 'gma', 'Glyma.10G215800' => 'gma', 'Glyma.12G224400' => 'gma', 'Glyma.13G179300' => 'gma', 'Glyma.13G218151' => 'gma', 'Glyma.13G238800' => 'gma', 'Glyma.13G276900' => 'gma', 'Glyma.14G078200' => 'gma', 'Glyma.15G074500' => 'gma', 'Glyma.15G094100' => 'gma', 'Glyma.17G247200' => 'gma', 'Glyma.18G120100' => 'gma', 'Glyma.20G176000' => 'gma', 'Gohir.A01G063600' => 'ghi', 'Gohir.A01G170301' => 'ghi', 'Gohir.A02G060500' => 'ghi', 'Gohir.A05G133850' => 'ghi', 'Gohir.A05G161400' => 'ghi', 'Gohir.A06G012900' => 'ghi', 'Gohir.A06G035901' => 'ghi', 'Gohir.A06G127100' => 'ghi', 'Gohir.A06G210500' => 'ghi', 'Gohir.A08G008650' => 'ghi', 'Gohir.A09G072700' => 'ghi', 'Gohir.A09G088301' => 'ghi', 'Gohir.A10G040600' => 'ghi', 'Gohir.A12G036300' => 'ghi', 'Gohir.A12G143350' => 'ghi', 'Gohir.A12G165500' => 'ghi', 'Gohir.A13G145700' => 'ghi', 'Gohir.D01G050000' => 'ghi', 'Gohir.D01G051366' => 'ghi', 'Gohir.D01G161350' => 'ghi', 'Gohir.D02G065900' => 'ghi', 'Gohir.D05G164200' => 'ghi', 'Gohir.D05G355500' => 'ghi', 'Gohir.D06G010400' => 'ghi', 'Gohir.D06G111250' => 'ghi', 'Gohir.D06G132000' => 'ghi', 'Gohir.D06G210500' => 'ghi', 'Gohir.D07G165675' => 'ghi', 'Gohir.D08G062240' => 'ghi', 'Gohir.D08G086101' => 'ghi', 'Gohir.D08G138060' => 'ghi', 'Gohir.D09G072300' => 'ghi', 'Gohir.D10G041400' => 'ghi', 'Gohir.D11G191020' => 'ghi', 'Gohir.D11G212066' => 'ghi', 'Gohir.D12G036300' => 'ghi', 'Gohir.D12G168600' => 'ghi', 'Gohir.D13G150600' => 'ghi', 'Gorai.001G057300' => 'gra', 'Gorai.002G069900' => 'gra', 'Gorai.002G200000' => 'gra', 'Gorai.003G067600' => 'gra', 'Gorai.005G074800' => 'gra', 'Gorai.006G087300' => 'gra', 'Gorai.008G037500' => 'gra', 'Gorai.008G181400' => 'gra', 'Gorai.009G169400' => 'gra', 'Gorai.009G387900' => 'gra', 'Gorai.010G013300' => 'gra', 'Gorai.010G153800' => 'gra', 'Gorai.010G255800' => 'gra', 'Gorai.011G043700' => 'gra', 'Gorai.011G198900' => 'gra', 'Gorai.013G168400' => 'gra', 'GSVIVG01005212001' => 'vvi', 'GSVIVG01006163001' => 'vvi', 'GSVIVG01009625001' => 'vvi', 'GSVIVG01014338001' => 'vvi', 'GSVIVG01020005001' => 'vvi', 'GSVIVG01021450001' => 'vvi', 'GSVIVG01023975001' => 'vvi', 'GSVIVG01034490001' => 'vvi', 'HanXRQChr04g0112071' => 'han', 'HanXRQChr05g0131151' => 'han', 'HanXRQChr09g0262371' => 'han', 'HanXRQChr09g0268401' => 'han', 'HanXRQChr10g0279241' => 'han', 'HanXRQChr10g0297961' => 'han', 'HanXRQChr11g0326231' => 'han', 'HanXRQChr11g0328471' => 'han', 'HanXRQChr16g0507941' => 'han', 'HanXRQChr17g0560211' => 'han', 'Haze_02108' => 'cav', 'Haze_02428' => 'cav', 'Haze_05593' => 'cav', 'Haze_06448' => 'cav', 'Haze_09427' => 'cav', 'Haze_12022' => 'cav', 'Haze_17612' => 'cav', 'Haze_17928' => 'cav', 'Hma1.2p1_0032F.1_g019250' => 'hma', 'Hma1.2p1_0163F.1_g072690' => 'hma', 'Hma1.2p1_0265F.1_g106710' => 'hma', 'Hma1.2p1_0286F.1_g113970' => 'hma', 'Hma1.2p1_0363F.1_g136640' => 'hma', 'Hma1.2p1_0584F.1_g183470' => 'hma', 'Hma1.2p1_0885F.1_g232570' => 'hma', 'HPP92_006022' => 'vpl', 'HPP92_007320' => 'vpl', 'HPP92_011521' => 'vpl', 'HPP92_019387' => 'vpl', 'HPP92_024038' => 'vpl', 'Hund05891' => 'sun', 'Hund06450' => 'sun', 'Hund12053' => 'sun', 'Hund16800' => 'sun', 'Hund21222' => 'sun', 'Hund22896' => 'sun', 'Hund23746' => 'sun', 'Hund27083' => 'sun', 'Lalb_Chr02g0141831' => 'lal', 'Lalb_Chr02g0141841' => 'lal', 'Lalb_Chr05g0220411' => 'lal', 'Lalb_Chr06g0162081' => 'lal', 'Lalb_Chr09g0327651' => 'lal', 'Lalb_Chr13g0295051' => 'lal', 'Lalb_Chr15g0086801' => 'lal', 'Lalb_Chr16g0383781' => 'lal', 'Lalb_Chr16g0383791' => 'lal', 'Lalb_Chr18g0055441' => 'lal', 'Lalb_Chr18g0059611' => 'lal', 'Lalb_Chr20g0109661' => 'lal', 'Lalb_Chr20g0109831' => 'lal', 'Lalb_Chr20g0121871' => 'lal', 'Lalb_Chr22g0355361' => 'lal', 'Lalb_Chr25g0286371' => 'lal', 'Lj1A1187G43' => 'lonja', 'Lj1A1205T50' => 'lonja', 'Lj1A800G33' => 'lonja', 'Lj1C1187T7' => 'lonja', 'Lj1C843T11' => 'lonja', 'Lj1g0010940' => 'lja', 'Lj2A288T69' => 'lonja', 'Lj3g0024276' => 'lja', 'Lj4A47T76' => 'lonja', 'Lj4g0005805' => 'lja', 'Lj4g0006097' => 'lja', 'Lj4g0008528' => 'lja', 'Lj4g0024907' => 'lja', 'Lj5g0012472' => 'lja', 'Lj5g0018648' => 'lja', 'Lj6C789G1' => 'lonja', 'Lj6g0004000' => 'lja', 'Lj7A292G67' => 'lonja', 'Lj7A292T64' => 'lonja', 'Lj9A400T58' => 'lonja', 'Lsat_1_v5_gn_1_126181' => 'lsa', 'Lsat_1_v5_gn_4_123041' => 'lsa', 'Lsat_1_v5_gn_4_133620' => 'lsa', 'Lsat_1_v5_gn_4_53221' => 'lsa', 'Lsat_1_v5_gn_4_71961' => 'lsa', 'Lsat_1_v5_gn_7_105241' => 'lsa', 'Lsat_1_v5_gn_7_21361' => 'lsa', 'Lsat_1_v5_gn_7_28860' => 'lsa', 'Lsat_1_v5_gn_7_31260' => 'lsa', 'Lsat_1_v5_gn_8_52801' => 'lsa', 'Manes.02G191400' => 'mes', 'Manes.03G110100' => 'mes', 'Manes.04G071100' => 'mes', 'Manes.05G100500' => 'mes', 'Manes.05G164700' => 'mes', 'Manes.15G087000' => 'mes', 'Manes.15G121500' => 'mes', 'Manes.16G028300' => 'mes', 'Manes.17G046100' => 'mes', 'Manes.17G069800' => 'mes', 'Manes.18G100500' => 'mes', 'Mapoly0002s0109' => 'mpo', 'Mapoly0024s0007' => 'mpo', 'Mapoly0089s0032' => 'mpo', 'MBI04_g42241_MAGBIO' => 'mbi', 'MBI05_g11988_MAGBIO' => 'mbi', 'MBI05_g35452_MAGBIO' => 'mbi', 'MBI07_g30179_MAGBIO' => 'mbi', 'MBI07_g35859_MAGBIO' => 'mbi', 'MBI07_g35860_MAGBIO' => 'mbi', 'MBI07_g37166_MAGBIO' => 'mbi', 'MBI08_g18172_MAGBIO' => 'mbi', 'MBI09_g08441_MAGBIO' => 'mbi', 'MBI13_g01676_MAGBIO' => 'mbi', 'MBI14_g42955_MAGBIO' => 'mbi', 'MBI16_g13161_MAGBIO' => 'mbi', 'MBI17_g27204_MAGBIO' => 'mbi', 'MBI19_g21595_MAGBIO' => 'mbi', 'MD00G1148400' => 'mdo', 'MD02G1301200' => 'mdo', 'MD03G1227800' => 'mdo', 'MD05G1041100' => 'mdo', 'MD05G1124800' => 'mdo', 'MD05G1284000' => 'mdo', 'MD05G1338800' => 'mdo', 'MD05G1338900' => 'mdo', 'MD07G1022800' => 'mdo', 'MD10G1047500' => 'mdo', 'MD10G1127500' => 'mdo', 'MD10G1262300' => 'mdo', 'MD10G1293800' => 'mdo', 'MD16G1074300' => 'mdo', 'Medtr1g021670' => 'mtr', 'Medtr1g096320' => 'mtr', 'Medtr2g013690' => 'mtr', 'Medtr2g019450' => 'mtr', 'Medtr2g085170' => 'mtr', 'Medtr4g088785' => 'mtr', 'Medtr8g055930' => 'mtr', 'Medtr8g085850' => 'mtr', 'MELO3C002605.2' => 'cme', 'MELO3C003891.2' => 'cme', 'MELO3C004012.2' => 'cme', 'MELO3C007134.2' => 'cme', 'MELO3C008118.2' => 'cme', 'MELO3C016700.2' => 'cme', 'MELO3C024127.2' => 'cme', 'MELO3C033361.2' => 'cme', 'MELO3C033362.2' => 'cme', 'Migut.C00430' => 'egut', 'Migut.C01246' => 'egut', 'Migut.E00101' => 'egut', 'Migut.H01486' => 'egut', 'Migut.H01939' => 'egut', 'Migut.K00360' => 'egut', 'Migut.M00910' => 'egut', 'Migut.M01139' => 'egut', 'Migut.N02677' => 'egut', 'MSTRG.13252' => 'ama', 'MSTRG.14701' => 'ama', 'MSTRG.1521' => 'ama', 'MSTRG.15884' => 'ama', 'MSTRG.16242' => 'ama', 'MSTRG.22285' => 'ama', 'MSTRG.22444' => 'ama', 'MSTRG.2349' => 'ama', 'MSTRG.26308' => 'ama', 'MSTRG.28296' => 'ama', 'MSTRG.9895' => 'ama', 'Nitab4.5_0000110g0060' => 'nta', 'Nitab4.5_0000420g0130' => 'nta', 'Nitab4.5_0000422g0030' => 'nta', 'Nitab4.5_0000560g0180' => 'nta', 'Nitab4.5_0000703g0100' => 'nta', 'Nitab4.5_0000786g0200' => 'nta', 'Nitab4.5_0001336g0020' => 'nta', 'Nitab4.5_0001796g0030' => 'nta', 'Nitab4.5_0003348g0060' => 'nta', 'Nitab4.5_0003698g0040' => 'nta', 'Nitab4.5_0003942g0090' => 'nta', 'Nitab4.5_0004775g0070' => 'nta', 'Nitab4.5_0004864g0030' => 'nta', 'Nitab4.5_0005615g0020' => 'nta', 'Nitab4.5_0009288g0030' => 'nta', 'Nitab4.5_0009341g0010' => 'nta', 'Nitab4.5_0009535g0010' => 'nta', 'Nn1g03995' => 'nnu', 'Nn1g04100' => 'nnu', 'Nn1g06530' => 'nnu', 'Nn3g16404' => 'nnu', 'Nn3g17212' => 'nnu', 'Nn3g20776' => 'nnu', 'Nn3g21923' => 'nnu', 'Nn5g27737' => 'nnu', 'Nn5g29461' => 'nnu', 'Nn7g38355' => 'nnu', 'Nn8g39873' => 'nnu', 'Oeu000548.2' => 'oeu', 'Oeu004672.1' => 'oeu', 'Oeu015605.2' => 'oeu', 'Oeu016092.1' => 'oeu', 'Oeu017879.3' => 'oeu', 'Oeu024910.1' => 'oeu', 'Oeu028965.1' => 'oeu', 'Oeu031269.1' => 'oeu', 'Oeu031270.1' => 'oeu', 'Oeu032535.1' => 'oeu', 'Oeu034151.1' => 'oeu', 'Oeu034152.1' => 'oeu', 'Oeu034588.2' => 'oeu', 'Oeu050846.1' => 'oeu', 'Oeu050849.2' => 'oeu', 'Oeu051063.2' => 'oeu', 'Oeu052368.1' => 'oeu', 'Oeu052370.1' => 'oeu', 'Os01g0210400' => 'osa', 'Os01g0304300' => 'osa', 'Os01g0749100' => 'osa', 'Os02g0745800' => 'osa', 'Os03g0769050' => 'osa', 'Os05g0531500' => 'osa', 'Os06g0724300' => 'osa', 'Os11g0198100' => 'osa', 'Peaxi162Scf00069g01425' => 'pax', 'Peaxi162Scf00280g00811' => 'pax', 'Peaxi162Scf00310g00615' => 'pax', 'Peaxi162Scf00362g00542' => 'pax', 'Peaxi162Scf00461g00310' => 'pax', 'Peaxi162Scf00530g00118' => 'pax', 'Peaxi162Scf00541g00057' => 'pax', 'Peaxi162Scf00661g00017' => 'pax', 'Peaxi162Scf00926g00027' => 'pax', 'Peaxi162Scf01064g00263' => 'pax', 'Peaxi162Scf01211g00135' => 'pax', 'PGR004G2336' => 'pgr', 'PGR042G0327' => 'pgr', 'PGR042G1957' => 'pgr', 'PGR042G2003' => 'pgr', 'PGR042G3929' => 'pgr', 'PGR083G1137' => 'pgr', 'PGR083G1364' => 'pgr', 'PGSC0003DMG400003381' => 'stu', 'PGSC0003DMG400003417' => 'stu', 'PGSC0003DMG400008981' => 'stu', 'PGSC0003DMG400012417' => 'stu', 'PGSC0003DMG400012823' => 'stu', 'PGSC0003DMG400016885' => 'stu', 'PGSC0003DMG400022812' => 'stu', 'PGSC0003DMG400029726' => 'stu', 'PGSC0003DMG401009243' => 'stu', 'PGSC0003DMG401031505' => 'stu', 'PGSC0003DMG402031505' => 'stu', 'Phvul.001G017600' => 'pvu', 'Phvul.002G193500' => 'pvu', 'Phvul.002G228900' => 'pvu', 'Phvul.002G236800' => 'pvu', 'Phvul.003G049500' => 'pvu', 'Phvul.005G072000' => 'pvu', 'Phvul.006G164800' => 'pvu', 'Phvul.006G185100' => 'pvu', 'Phvul.007G090000' => 'pvu', 'Potri.001G399800' => 'ptr', 'Potri.002G149900' => 'ptr', 'Potri.004G044100' => 'ptr', 'Potri.004G177600' => 'ptr', 'Potri.009G138000' => 'ptr', 'Potri.010G094000' => 'ptr', 'Potri.011G053000' => 'ptr', 'Potri.011G119300' => 'ptr', 'Potri.013G113700' => 'ptr', 'Potri.018G107800' => 'ptr', 'Potri.019G084100' => 'ptr', 'Pp3c14_23720' => 'ppa', 'Pp3c16_6340' => 'ppa', 'Pp3c23_13420' => 'ppa', 'Pp3c24_2740' => 'ppa', 'Pp3c25_860' => 'ppa', 'Pp3c8_21750' => 'ppa', 'Prupe.1G273000' => 'ppe', 'Prupe.1G273700' => 'ppe', 'Prupe.1G274100' => 'ppe', 'Prupe.2G023300' => 'ppe', 'Prupe.4G048000' => 'ppe', 'Prupe.4G080400' => 'ppe', 'Prupe.4G181200' => 'ppe', 'Prupe.8G056900' => 'ppe', 'Prupe.8G168700' => 'ppe', 'Psat1g189080' => 'psa', 'Psat1g204760' => 'psa', 'Psat4g175560' => 'psa', 'Psat4g177720' => 'psa', 'Psat5g244240' => 'psa', 'Psat6g010720' => 'psa', 'Psat6g187200' => 'psa', 'Psat7g072040' => 'psa', 'PSO017G3501' => 'pso', 'PSO063G2148' => 'pso', 'PSO063G5608' => 'pso', 'PSO210G6392' => 'pso', 'PSO541G2319' => 'pso', 'PSO541G2836' => 'pso', 'PSO541G4012' => 'pso', 'PSO541G6253' => 'pso', 'PSO675G0580' => 'pso', 'PSO675G0856' => 'pso', 'PSO675G5635' => 'pso', 'PSO675G9157' => 'pso', 'PSO832G1660' => 'pso', 'PSO832G1969' => 'pso', 'QL02p007186' => 'qlo', 'QL02p033904' => 'qlo', 'QL03p064391' => 'qlo', 'QL05p040593' => 'qlo', 'QL05p058242' => 'qlo', 'QL08p021825' => 'qlo', 'QL11p004981' => 'qlo', 'RcHm_v2.0_Chr1g0318301' => 'rch', 'RcHm_v2.0_Chr4g0418501' => 'rch', 'RcHm_v2.0_Chr4g0439971' => 'rch', 'RcHm_v2.0_Chr5g0008541' => 'rch', 'RcHm_v2.0_Chr5g0014101' => 'rch', 'RcHm_v2.0_Chr5g0014131' => 'rch', 'RcHm_v2.0_Chr5g0033621' => 'rch', 'RcHm_v2.0_Chr6g0272041' => 'rch', 'RcHm_v2.0_Chr6g0278831' => 'rch', 'Rhsim02G0130400' => 'rsi', 'Rhsim02G0171100' => 'rsi', 'Rhsim05G0053000' => 'rsi', 'Rhsim05G0053100' => 'rsi', 'Rhsim06G0096500' => 'rsi', 'Rhsim06G0096600' => 'rsi', 'Rhsim06G0199100' => 'rsi', 'Rhsim12G0062300' => 'rsi', 'Rhsim12G0062800' => 'rsi', 'Sabra02G0118600' => 'sbr', 'Sabra04G0027300' => 'sbr', 'Sabra04G0119500' => 'sbr', 'Sabra08G0112500' => 'sbr', 'Sabra11G0036800' => 'sbr', 'Sabra11G0103800' => 'sbr', 'Sabra13G0096300' => 'sbr', 'Sabra16G0262300' => 'sbr', 'Sabra18G0091700' => 'sbr', 'Sabra19G0095400' => 'sbr', 'SalBow6G3080' => 'sbo', 'SalBow7G1157' => 'sbo', 'SalBow7G2123' => 'sbo', 'SalBow7G2285' => 'sbo', 'SalBow7G3537' => 'sbo', 'SalBow8G2947' => 'sbo', 'SalBow8G4463' => 'sbo', 'SalBow8G5466' => 'sbo', 'Sc01g0001750' => 'sci', 'Sc02g0006640' => 'sci', 'Sc02g0006670' => 'sci', 'Sc04g0008220' => 'sci', 'Sc05g0006190' => 'sci', 'Sc08g0002760' => 'sci', 'Sc17g0006170' => 'sci', 'Sc22g0002050' => 'sci', 'Sc23g0001190' => 'sci', 'Sc24g0000980' => 'sci', 'Sed0006245' => 'sed', 'Sed0007543' => 'sed', 'Sed0009411' => 'sed', 'Sed0010765' => 'sed', 'Sed0012944' => 'sed', 'Sed0014682' => 'sed', 'Sed0016174' => 'sed', 'Sed0016796' => 'sed', 'Sed0020317' => 'sed', 'Sed0021467' => 'sed', 'SEGI_01316' => 'sgi', 'SEGI_03374' => 'sgi', 'SEGI_16265' => 'sgi', 'SEGI_18569' => 'sgi', 'SEGI_20351' => 'sgi', 'SEGI_26395' => 'sgi', 'SEGI_29469' => 'sgi', 'SEGI_34771' => 'sgi', 'SEGI_36769' => 'sgi', 'SEGI_37139' => 'sgi', 'SGA_v2.0_scaffold100G29687' => 'sas', 'SGA_v2.0_scaffold118G32472' => 'sas', 'SGA_v2.0_scaffold14G07051' => 'sas', 'SGA_v2.0_scaffold183G39845' => 'sas', 'SGA_v2.0_scaffold1G00174' => 'sas', 'SGA_v2.0_scaffold22G09714' => 'sas', 'SGA_v2.0_scaffold333G48992' => 'sas', 'SGA_v2.0_scaffold46G17491' => 'sas', 'SGA_v2.0_scaffold49G18294' => 'sas', 'SGA_v2.0_scaffold63G21658' => 'sas', 'SHI01741' => 'shi', 'SHI05771' => 'shi', 'SHI18077' => 'shi', 'SHI20525' => 'shi', 'SHI20527' => 'shi', 'SHI20528' => 'shi', 'SMO172G0185' => 'smo', 'SMO198G0020' => 'smo', 'SMO351G0006' => 'smo', 'SMO356G0118' => 'smo', 'SMO358G0296' => 'smo', 'SMO367G0079' => 'smo', 'SMO367G1277' => 'smo', 'Solyc01g014220.3' => 'sly', 'Solyc01g111770.2' => 'sly', 'Solyc02g078180.3' => 'sly', 'Solyc03g006430.3' => 'sly', 'Solyc03g006456.1' => 'sly', 'Solyc03g079860.2' => 'sly', 'Solyc04g079770.3' => 'sly', 'Solyc05g007430.4' => 'sly', 'Solyc07g063150.3' => 'sly', 'Solyc08g016620.3' => 'sly', 'Solyc09g057590.3' => 'sly', 'Solyc09g057600.1' => 'sly', 'Solyc10g009050.3' => 'sly', 'Solyc11g017420.2' => 'sly', 'Sopen01g053810' => 'spe', 'Sopen02g023040' => 'spe', 'Sopen03g002440' => 'spe', 'Sopen04g033350' => 'spe', 'Sopen05g003310' => 'spe', 'Sopen07g004050' => 'spe', 'Sopen07g031340' => 'spe', 'Sopen08g006990' => 'spe', 'Sopen10g004830' => 'spe', 'Sopen11g009370' => 'spe', 'Sp1g24450' => 'spa', 'Sp1g29670' => 'spa', 'Sp1g39600' => 'spa', 'Sp2g11080' => 'spa', 'Sp2g13970' => 'spa', 'Sp4g16130' => 'spa', 'Sp6g13080' => 'spa', 'Sp7g37270' => 'spa', 'TAR371G0065' => 'tar', 'TAR376G0340' => 'tar', 'TAR376G0435' => 'tar', 'TAR381G0002' => 'tar', 'TAR381G1236' => 'tar', 'TAR624G0055' => 'tar', 'TAR624G0324' => 'tar', 'TAR624G0696' => 'tar', 'TAR624G0906' => 'tar', 'TAR625G0107' => 'tar', 'TAR626G0015' => 'tar', 'TAR626G1356' => 'tar', 'TAR627G0888' => 'tar', 'TAR628G0399' => 'tar', 'TAR628G1327' => 'tar', 'TAR629G2831' => 'tar', 'TAR629G2874' => 'tar', 'TAR633G1432' => 'tar', 'TAR633G2771' => 'tar', 'THA.LOC104803394' => 'tha', 'THA.LOC104805153' => 'tha', 'THA.LOC104806784' => 'tha', 'THA.LOC104810473' => 'tha', 'THA.LOC104813100' => 'tha', 'THA.LOC104814215' => 'tha', 'THA.LOC104815554' => 'tha', 'THA.LOC104820544' => 'tha', 'THA.LOC104824754' => 'tha', 'THA.LOC104827717' => 'tha', 'Thecc.02G031400' => 'tca', 'Thecc.02G055900' => 'tca', 'Thecc.02G350800' => 'tca', 'Thecc.06G150900' => 'tca', 'Thecc.06G186600' => 'tca', 'Thecc.07G089600' => 'tca', 'Thecc.08G020400' => 'tca', 'Thecc.08G182100' => 'tca', 'Thhalv10000873m.g' => 'esa', 'Thhalv10004185m.g' => 'esa', 'Thhalv10006981m.g' => 'esa', 'Thhalv10007204m.g' => 'esa', 'Thhalv10011374m.g' => 'esa', 'Thhalv10013482m.g' => 'esa', 'Thhalv10017801m.g' => 'esa', 'Thhalv10024983m.g' => 'esa', 'TPR.G12072' => 'tpr', 'TPR.G15769' => 'tpr', 'TPR.G16504' => 'tpr', 'TPR.G16506' => 'tpr', 'TPR.G24345' => 'tpr', 'TPR.G26666' => 'tpr', 'TPR.G27320' => 'tpr', 'TPR.G31819' => 'tpr', 'TPR.G38879' => 'tpr', 'TPR.G39015' => 'tpr', 'TPR.G8819' => 'tpr', 'TWI09G0924' => 'twi', 'TWI12G0811' => 'twi', 'TWI12G1294' => 'twi', 'TWI31G0150' => 'twi', 'TWI36G1262' => 'twi', 'TWI38G1287' => 'twi', 'TWI38G1633' => 'twi', 'TWI38G1982' => 'twi', 'TWI39G0116' => 'twi', 'TWI60G1011' => 'twi', 'TWI63G0171' => 'twi', 'TWI73G0839' => 'twi', 'TWI79G1511' => 'twi', 'unitig_0.g915' => 'ugi', 'unitig_0.g916' => 'ugi', 'unitig_21.g20219' => 'ugi', 'unitig_21.g20416' => 'ugi', 'unitig_578.g16132' => 'ugi', 'unitig_578.g16718' => 'ugi', 'unitig_62.g23481' => 'ugi', 'unitig_744.g24535' => 'ugi', 'unitig_749.g13525' => 'ugi', 'vmacro01248' => 'vma', 'vmacro02290' => 'vma', 'vmacro10946' => 'vma', 'vmacro11865' => 'vma', 'vmacro12493' => 'vma', 'vmacro17322' => 'vma', 'vmacro21599' => 'vma', 'vmacro23041' => 'vma', 'VMungo0251G0004' => 'vmu', 'VMungo0251G2639' => 'vmu', 'VMungo0251G2967' => 'vmu', 'VMungo0540G0864' => 'vmu', 'VMungo0540G1569' => 'vmu', 'VMungo0647G0317' => 'vmu', 'VMungo0720G1373' => 'vmu', 'VMungo0720G1508' => 'vmu', 'VMungo1080G0485' => 'vmu', 'VMungo1215G3177' => 'vmu', 'Zm00001eb112600' => 'zma', 'Zm00001eb120220' => 'zma', 'Zm00001eb153240' => 'zma', 'Zm00001eb168880' => 'zma', 'Zm00001eb213920' => 'zma', 'Zm00001eb228280' => 'zma', 'Zm00001eb254580' => 'zma', 'Zm00001eb272180' => 'zma', 'Zm00001eb293190' => 'zma', 'Zm00001eb322930' => 'zma', 'Zm00001eb353360' => 'zma', 'Zm00001eb353390' => 'zma', 'Zm00001eb353430' => 'zma', 'Zm00001eb353440' => 'zma', 'Zm00001eb353780' => 'zma' ) $gf_id = 'HOM05D000499' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000499' ) $data_identifier = 'HOM05D000499' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 29, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 12, 'amhyb' => (int) 8, 'aly' => (int) 12, 'aox' => (int) 9, 'arhy' => (int) 26, 'ath' => (int) 8, 'atr' => (int) 7, 'acertr' => (int) 10, 'cqu' => (int) 15, 'bca' => (int) 29, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 11, 'cansat' => (int) 8, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 9, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 8, 'cpa' => (int) 10, 'csa' => (int) 7, 'camsi' => (int) 20, 'dca' => (int) 8, 'din' => (int) 12, 'dzi' => (int) 14, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 6, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 38, 'gra' => (int) 16, 'vvi' => (int) 8, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 5, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 11, 'lja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 11, 'mpo' => (int) 3, 'mbi' => (int) 14, 'mdo' => (int) 14, 'mtr' => (int) 8, 'cme' => (int) 9, 'egut' => (int) 9, 'ama' => (int) 11, 'nta' => (int) 17, 'nnu' => (int) 11, 'oeu' => (int) 18, 'osa' => (int) 8, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 6, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 9, 'rsi' => (int) 9, 'sbr' => (int) 10, 'sbo' => (int) 8, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 10, 'sas' => (int) 10, 'shi' => (int) 6, 'smo' => (int) 7, 'sly' => (int) 14, 'spe' => (int) 10, 'spa' => (int) 8, 'tar' => (int) 19, 'tha' => (int) 10, 'tca' => (int) 8, 'esa' => (int) 8, 'tpr' => (int) 11, 'twi' => (int) 13, 'ugi' => (int) 9, 'vma' => (int) 8, 'vmu' => (int) 10, 'zma' => (int) 15 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb353780' $species_info = array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ) $local_species = 'aly' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000499', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1066', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p29780' => 'bna', 'A02p33180' => 'bna', 'A03p16470' => 'bna', 'A03p66010' => 'bna', 'A04p25970' => 'bna', 'A06p01270' => 'bna', 'A06p46080' => 'bna', 'A07p11400' => 'bna', 'A08p01840' => 'bna', 'A08p08230' => 'bna', 'A08p25740' => 'bna', 'A09p32070' => 'bna', 'A09p37830' => 'bna', 'A09p42840' => 'bna', 'A09p42850' => 'bna', 'Aa31LG10G2060' => 'aar', 'Aa31LG2G7410' => 'aar', 'Aa31LG6G10200' => 'aar', 'Aa31LG6G16680' => 'aar', 'Aa31LG6G8470' => 'aar', 'Aa31LG9G12730' => 'aar', 'Aa31LG9G13680' => 'aar', 'Aa31LG9G14920' => 'aar', 'Aa31LG9G6650' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4977' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5467' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3254' => 'aag', 'Actinidia02578' => 'ach', 'Actinidia07693' => 'ach', 'Actinidia08413' => 'ach', 'Actinidia08414' => 'ach', 'Actinidia15289' => 'ach', 'Actinidia19871' => 'ach', 'Actinidia21475' => 'ach', 'Actinidia22576' => 'ach', 'Actinidia28327' => 'ach', 'Actinidia32491' => 'ach', 'Actinidia39463' => 'ach', 'Actinidia39571' => 'ach', 'Ah.01g013750' => 'amhyb', 'Ah.01g023210' => 'amhyb', 'Ah.04g164850' => 'amhyb', 'Ah.05g178060' => 'amhyb', 'Ah.07g204270' => 'amhyb', 'Ah.07g208480' => 'amhyb', 'Ah.09g237410' => 'amhyb', 'Ah.14g089460' => 'amhyb', 'AL1G41790' => 'aly', 'AL1G49050' => 'aly', 'AL1G53810' => 'aly', 'AL1G61400' => 'aly', 'AL4G18580' => 'aly', 'AL5G12510' => 'aly', 'AL5G12540' => 'aly', 'AL6G43230' => 'aly', 'AL7G10370' => 'aly', 'AL7G19250' => 'aly', 'AL8G12240' => 'aly', 'AL8G18540' => 'aly', 'Aqoxy1G02409' => 'aox', 'Aqoxy2G03993' => 'aox', 'Aqoxy3G03357' => 'aox', 'Aqoxy4G00785' => 'aox', 'Aqoxy5G02598' => 'aox', 'Aqoxy6G00132' => 'aox', 'Aqoxy7G01776' => 'aox', 'Aqoxy7G02316' => 'aox', 'Aqoxy7G03973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.12AFKW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B8730' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27IQR1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3F75VG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3RE0GA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41TCQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.527VTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FIR39' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5W8UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DA38EV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ63HS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H1I32C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HC27T5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4M8AP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7N3CZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9UVDZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LS1NQA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT1D4B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SKC4TM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCFV76' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF9Q1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQWD9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1ZM88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WE07RT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YCK7VH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJE6Q6' => 'arhy', 'AT1G28240' => 'ath', 'AT1G34550' => 'ath', 'AT1G53040' => 'ath', 'AT2G02910' => 'ath', 'AT4G09630' => 'ath', 'AT4G38500' => 'ath', 'AT5G42660' => 'ath', 'AT5G46220' => 'ath', 'ATR0152G026' => 'atr', 'ATR0564G343' => 'atr', 'ATR0706G151' => 'atr', 'ATR0733G207' => 'atr', 'ATR0751G234' => 'atr', 'ATR0807G048' => 'atr', 'ATR1091G084' => 'atr', 'Atru.chr10.1229' => 'acertr', 'Atru.chr10.1230' => 'acertr', 'Atru.chr10.1874' => 'acertr', 'Atru.chr11.1808' => 'acertr', 'Atru.chr13.1795' => 'acertr', 'Atru.chr13.570' => 'acertr', 'Atru.chr2.2608' => 'acertr', 'Atru.chr2.2609' => 'acertr', 'Atru.chr5.3428' => 'acertr', 'Atru.chr8.1171' => 'acertr', 'AUR62004651' => 'cqu', 'AUR62008675' => 'cqu', 'AUR62010014' => 'cqu', 'AUR62013004' => 'cqu', 'AUR62014825' => 'cqu', 'AUR62015015' => 'cqu', 'AUR62015151' => 'cqu', 'AUR62017020' => 'cqu', 'AUR62019422' => 'cqu', 'AUR62023570' => 'cqu', 'AUR62025571' => 'cqu', 'AUR62029098' => 'cqu', 'AUR62033863' => 'cqu', 'AUR62034296' => 'cqu', 'AUR62040075' => 'cqu', 'BcaB02g07334' => 'bca', 'BcaB02g10575' => 'bca', 'BcaB03g12119' => 'bca', 'BcaB03g12120' => 'bca', 'BcaB03g13945' => 'bca', 'BcaB04g17123' => 'bca', 'BcaB04g17867' => 'bca', 'BcaB04g19839' => 'bca', 'BcaB07g30317' => 'bca', 'BcaB07g32432' => 'bca', 'BcaB07g33362' => 'bca', 'BcaB08g36611' => 'bca', 'BcaC01g00028' => 'bca', 'BcaC01g01356' => 'bca', 'BcaC01g02034' => 'bca', 'BcaC01g06051' => 'bca', 'BcaC03g16839' => 'bca', 'BcaC03g17176' => 'bca', 'BcaC05g26829' => 'bca', 'BcaC06g31490' => 'bca', 'BcaC06g35344' => 'bca', 'BcaC06g36570' => 'bca', 'BcaC07g37537' => 'bca', 'BcaC08g43491' => 'bca', 'BcaC08g43773' => 'bca', 'BcaNung00234' => 'bca', 'BcaNung01982' => 'bca', 'BcaNung03707' => 'bca', 'BcaNung06454' => 'bca', 'BolC2t10762H' => 'bol', 'BolC2t11191H' => 'bol', 'BolC3t14322H' => 'bol', 'BolC3t19747H' => 'bol', 'BolC3t21425H' => 'bol', 'BolC4t27800H' => 'bol', 'BolC5t31423H' => 'bol', 'BolC6t35951H' => 'bol', 'BolC6t36282H' => 'bol', 'BolC7t40678H' => 'bol', 'BolC7t40679H' => 'bol', 'BolC7t42222H' => 'bol', 'BolC7t43492H' => 'bol', 'BolC7t46785H' => 'bol', 'BolC8t47853H' => 'bol', 'BolC9t56805H' => 'bol', 'BraA02t08000Z' => 'bra', 'BraA02t08341Z' => 'bra', 'BraA03t10936Z' => 'bra', 'BraA03t15657Z' => 'bra', 'BraA04t18100Z' => 'bra', 'BraA05t20523Z' => 'bra', 'BraA06t23353Z' => 'bra', 'BraA06t27473Z' => 'bra', 'BraA06t27769Z' => 'bra', 'BraA07t28928Z' => 'bra', 'BraA08t32236Z' => 'bra', 'BraA08t32841Z' => 'bra', 'BraA08t34524Z' => 'bra', 'BraA09t38742Z' => 'bra', 'BraA09t39295Z' => 'bra', 'C02p47180' => 'bna', 'C02p50990' => 'bna', 'C03p19360' => 'bna', 'C03p74950' => 'bna', 'C03p91000' => 'bna', 'C04p63260' => 'bna', 'C05p27050' => 'bna', 'C06p08750' => 'bna', 'C06p11490' => 'bna', 'C07p02820' => 'bna', 'C07p17180' => 'bna', 'C07p29440' => 'bna', 'C07p63730' => 'bna', 'C09p39260' => 'bna', 'CAN.G1164.34' => 'can', 'CAN.G1164.39' => 'can', 'CAN.G1530.3' => 'can', 'CAN.G162.61' => 'can', 'CAN.G176.6' => 'can', 'CAN.G289.49' => 'can', 'CAN.G370.21' => 'can', 'CAN.G370.22' => 'can', 'CAN.G371.117' => 'can', 'CAN.G58.37' => 'can', 'CAN.G588.98' => 'can', 'CANSAT21G2266' => 'cansat', 'CANSAT25G2799' => 'cansat', 'CANSAT35G0862' => 'cansat', 'CANSAT35G1704' => 'cansat', 'CANSAT35G1760' => 'cansat', 'CANSAT56G3971' => 'cansat', 'CANSAT56G4116' => 'cansat', 'CANSAT80G1259' => 'cansat', 'CARHR027730' => 'chi', 'CARHR033880' => 'chi', 'CARHR043270' => 'chi', 'CARHR145330' => 'chi', 'CARHR145340' => 'chi', 'CARHR175570' => 'chi', 'CARHR181570' => 'chi', 'CARHR258470' => 'chi', 'CARHR260490' => 'chi', 'CARHR294220' => 'chi', 'Carub.0001s2668' => 'cru', 'Carub.0001s3257' => 'cru', 'Carub.0001s4220' => 'cru', 'Carub.0005s0179' => 'cru', 'Carub.0006s2807' => 'cru', 'Carub.0007s0039' => 'cru', 'Carub.0008s0169' => 'cru', 'Carub.0008s0636' => 'cru', 'Ca_00338_v3' => 'car', 'Ca_00542_v3' => 'car', 'Ca_01844_v3' => 'car', 'Ca_10611_v3' => 'car', 'Ca_13326_v3' => 'car', 'Ca_17944_v3' => 'car', 'Ca_18546_v3' => 'car', 'Ca_24219_v3' => 'car', 'Ca_29972_v3' => 'car', 'CBR_g3681' => 'cbr', 'CBR_g40021' => 'cbr', 'Cc01_g08140' => 'ccan', 'Cc02_g13410' => 'ccan', 'Cc02_g37480' => 'ccan', 'Cc05_g12030' => 'ccan', 'Cc09_g03370' => 'ccan', 'Cc09_g10300' => 'ccan', 'Cc10_g03530' => 'ccan', 'Cc10_g11380' => 'ccan', 'CDE01G0176' => 'cde', 'CDE02G0675' => 'cde', 'CDE02G0942' => 'cde', 'CDE02G1153' => 'cde', 'CDE02G4177' => 'cde', 'CDE04G2117' => 'cde', 'CDE04G2736' => 'cde', 'CDE08G1161' => 'cde', 'CDE09G1238' => 'cde', 'Cfa000467' => 'cfa', 'Cfa000947' => 'cfa', 'Cfa004969' => 'cfa', 'Cfa005284' => 'cfa', 'Cfa008993' => 'cfa', 'Cfa018187' => 'cfa', 'Cfa018454' => 'cfa', 'Cfa020585' => 'cfa', 'Ciclev10000424m.g' => 'ccl', 'Ciclev10003605m.g' => 'ccl', 'Ciclev10007828m.g' => 'ccl', 'Ciclev10014620m.g' => 'ccl', 'Ciclev10015169m.g' => 'ccl', 'Ciclev10018291m.g' => 'ccl', 'Ciclev10028256m.g' => 'ccl', 'Ciclev10033822m.g' => 'ccl', 'CiPaw.05G060300' => 'cil', 'CiPaw.05G085000' => 'cil', 'CiPaw.06G083700' => 'cil', 'CiPaw.06G120300' => 'cil', 'CiPaw.09G060500' => 'cil', 'CiPaw.09G123800' => 'cil', 'CiPaw.11G169700' => 'cil', 'CiPaw.12G118300' => 'cil', 'CiPaw.15G071000' => 'cil', 'CiPaw.15G081900' => 'cil', 'ClCG01G024610' => 'cla', 'ClCG03G006070' => 'cla', 'ClCG05G019250' => 'cla', 'ClCG09G009500' => 'cla', 'ClCG11G008200' => 'cla', 'ClCG11G018080' => 'cla', 'COL.COLO4_17373' => 'col', 'COL.COLO4_22994' => 'col', 'COL.COLO4_26389' => 'col', 'COL.COLO4_27170' => 'col', 'COL.COLO4_31074' => 'col', 'COL.COLO4_31465' => 'col', 'COL.COLO4_36438' => 'col', 'COL.COLO4_36439' => 'col', 'Cpa.g.c38781' => 'cpa', 'Cpa.g.sc128.12' => 'cpa', 'Cpa.g.sc166.7' => 'cpa', 'Cpa.g.sc166.8' => 'cpa', 'Cpa.g.sc20.111' => 'cpa', 'Cpa.g.sc27.31' => 'cpa', 'Cpa.g.sc64.36' => 'cpa', 'Cpa.g.sc64.37' => 'cpa', 'Cpa.g.sc66.49' => 'cpa', 'Cpa.g.sc80.64' => 'cpa', 'CsaV3_1G012320' => 'csa', 'CsaV3_2G008480' => 'csa', 'CsaV3_2G033450' => 'csa', 'CsaV3_3G044830' => 'csa', 'CsaV3_4G033710' => 'csa', 'CsaV3_6G051730' => 'csa', 'CsaV3_7G025350' => 'csa', 'CSS0001067' => 'camsi', 'CSS0005996' => 'camsi', 'CSS0006590' => 'camsi', 'CSS0009673' => 'camsi', 'CSS0010201' => 'camsi', 'CSS0010549' => 'camsi', 'CSS0011364' => 'camsi', 'CSS0014473' => 'camsi', 'CSS0014961' => 'camsi', 'CSS0020191' => 'camsi', 'CSS0021165' => 'camsi', 'CSS0022306' => 'camsi', 'CSS0030591' => 'camsi', 'CSS0030696' => 'camsi', 'CSS0032653' => 'camsi', 'CSS0037487' => 'camsi', 'CSS0041102' => 'camsi', 'CSS0041261' => 'camsi', 'CSS0046246' => 'camsi', 'CSS0049256' => 'camsi', 'DCAR_004075' => 'dca', 'DCAR_011538' => 'dca', 'DCAR_019553' => 'dca', 'DCAR_020952' => 'dca', 'DCAR_021739' => 'dca', 'DCAR_027407' => 'dca', 'DCAR_027913' => 'dca', 'DCAR_028066' => 'dca', 'Dinv05899' => 'din', 'Dinv07563' => 'din', 'Dinv08010' => 'din', 'Dinv14125' => 'din', 'Dinv20172' => 'din', 'Dinv30743' => 'din', 'Dinv31229' => 'din', 'Dinv34162' => 'din', 'Dinv36028' => 'din', 'Dinv39368' => 'din', 'Dinv40565' => 'din', 'Dinv41706' => 'din', 'Duzib052G0089' => 'dzi', 'Duzib116G0641' => 'dzi', 'Duzib132G0069' => 'dzi', 'Duzib132G1219' => 'dzi', 'Duzib147G0278' => 'dzi', 'Duzib160G0480' => 'dzi', 'Duzib170G0661' => 'dzi', 'Duzib177G0591' => 'dzi', 'Duzib187G1353' => 'dzi', 'Duzib192G0858' => 'dzi', 'Duzib192G0883' => 'dzi', 'Duzib213G0506' => 'dzi', 'Duzib235G0289' => 'dzi', 'Duzib251G0422' => 'dzi', 'ECA232G3898' => 'eca', 'ECA233G5950' => 'eca', 'ECA234G1699' => 'eca', 'ECA234G2421' => 'eca', 'ECA236G0426' => 'eca', 'ECA236G4331' => 'eca', 'ECA248G2573' => 'eca', 'EL10Ac1g00077' => 'bvu', 'EL10Ac1g01746' => 'bvu', 'EL10Ac2g03464' => 'bvu', 'EL10Ac4g08176' => 'bvu', 'EL10Ac7g17521' => 'bvu', 'EL10Ac8g20386' => 'bvu', 'EL10Ac9g21343' => 'bvu', 'EL10Ac9g22688' => 'bvu', 'Eucgr.B03434' => 'egr', 'Eucgr.D00618' => 'egr', 'Eucgr.E02395' => 'egr', 'Eucgr.F01129' => 'egr', 'Eucgr.F02622' => 'egr', 'Eucgr.F04207' => 'egr', 'FAN01G0570' => 'fan', 'FAN03G3351' => 'fan', 'FAN06G3702' => 'fan', 'FAN07G2149' => 'fan', 'FAN10G3758' => 'fan', 'FAN11G1170' => 'fan', 'FAN11G2050' => 'fan', 'FAN11G2724' => 'fan', 'FAN12G1700' => 'fan', 'FAN12G2028' => 'fan', 'FAN15G1160' => 'fan', 'FAN15G3063' => 'fan', 'FAN16G2540' => 'fan', 'FAN16G3077' => 'fan', 'FAN16G3624' => 'fan', 'FAN17G0221' => 'fan', 'FAN20G2492' => 'fan', 'FAN20G2905' => 'fan', 'FAN21G0548' => 'fan', 'FAN21G1300' => 'fan', 'FAN22G0077' => 'fan', 'FAN22G1315' => 'fan', 'FAN24G1280' => 'fan', 'FAN24G1445' => 'fan', 'FAN24G3527' => 'fan', 'FAN25G0464' => 'fan', 'FAN25G2885' => 'fan', 'FAN25G3270' => 'fan', 'FAN27G1101' => 'fan', 'FAN27G2846' => 'fan', 'FAN27G3524' => 'fan', 'FvH4_2g11770' => 'fve', 'FvH4_2g15630' => 'fve', 'FvH4_3g05570' => 'fve', 'FvH4_3g09110' => 'fve', 'FvH4_3g19940' => 'fve', 'FvH4_4g04821' => 'fve', 'FvH4_4g31480' => 'fve', 'FvH4_7g01740' => 'fve', 'Glyma.05G130400' => 'gma', 'Glyma.05G156400' => 'gma', 'Glyma.07G197000' => 'gma', 'Glyma.08G085151' => 'gma', 'Glyma.08G114500' => 'gma', 'Glyma.08G300400' => 'gma', 'Glyma.10G215800' => 'gma', 'Glyma.12G224400' => 'gma', 'Glyma.13G179300' => 'gma', 'Glyma.13G218151' => 'gma', 'Glyma.13G238800' => 'gma', 'Glyma.13G276900' => 'gma', 'Glyma.14G078200' => 'gma', 'Glyma.15G074500' => 'gma', 'Glyma.15G094100' => 'gma', 'Glyma.17G247200' => 'gma', 'Glyma.18G120100' => 'gma', 'Glyma.20G176000' => 'gma', 'Gohir.A01G063600' => 'ghi', 'Gohir.A01G170301' => 'ghi', 'Gohir.A02G060500' => 'ghi', 'Gohir.A05G133850' => 'ghi', 'Gohir.A05G161400' => 'ghi', 'Gohir.A06G012900' => 'ghi', 'Gohir.A06G035901' => 'ghi', 'Gohir.A06G127100' => 'ghi', 'Gohir.A06G210500' => 'ghi', 'Gohir.A08G008650' => 'ghi', 'Gohir.A09G072700' => 'ghi', 'Gohir.A09G088301' => 'ghi', 'Gohir.A10G040600' => 'ghi', 'Gohir.A12G036300' => 'ghi', 'Gohir.A12G143350' => 'ghi', 'Gohir.A12G165500' => 'ghi', 'Gohir.A13G145700' => 'ghi', 'Gohir.D01G050000' => 'ghi', 'Gohir.D01G051366' => 'ghi', 'Gohir.D01G161350' => 'ghi', 'Gohir.D02G065900' => 'ghi', 'Gohir.D05G164200' => 'ghi', 'Gohir.D05G355500' => 'ghi', 'Gohir.D06G010400' => 'ghi', 'Gohir.D06G111250' => 'ghi', 'Gohir.D06G132000' => 'ghi', 'Gohir.D06G210500' => 'ghi', 'Gohir.D07G165675' => 'ghi', 'Gohir.D08G062240' => 'ghi', 'Gohir.D08G086101' => 'ghi', 'Gohir.D08G138060' => 'ghi', 'Gohir.D09G072300' => 'ghi', 'Gohir.D10G041400' => 'ghi', 'Gohir.D11G191020' => 'ghi', 'Gohir.D11G212066' => 'ghi', 'Gohir.D12G036300' => 'ghi', 'Gohir.D12G168600' => 'ghi', 'Gohir.D13G150600' => 'ghi', 'Gorai.001G057300' => 'gra', 'Gorai.002G069900' => 'gra', 'Gorai.002G200000' => 'gra', 'Gorai.003G067600' => 'gra', 'Gorai.005G074800' => 'gra', 'Gorai.006G087300' => 'gra', 'Gorai.008G037500' => 'gra', 'Gorai.008G181400' => 'gra', 'Gorai.009G169400' => 'gra', 'Gorai.009G387900' => 'gra', 'Gorai.010G013300' => 'gra', 'Gorai.010G153800' => 'gra', 'Gorai.010G255800' => 'gra', 'Gorai.011G043700' => 'gra', 'Gorai.011G198900' => 'gra', 'Gorai.013G168400' => 'gra', 'GSVIVG01005212001' => 'vvi', 'GSVIVG01006163001' => 'vvi', 'GSVIVG01009625001' => 'vvi', 'GSVIVG01014338001' => 'vvi', 'GSVIVG01020005001' => 'vvi', 'GSVIVG01021450001' => 'vvi', 'GSVIVG01023975001' => 'vvi', 'GSVIVG01034490001' => 'vvi', 'HanXRQChr04g0112071' => 'han', 'HanXRQChr05g0131151' => 'han', 'HanXRQChr09g0262371' => 'han', 'HanXRQChr09g0268401' => 'han', 'HanXRQChr10g0279241' => 'han', 'HanXRQChr10g0297961' => 'han', 'HanXRQChr11g0326231' => 'han', 'HanXRQChr11g0328471' => 'han', 'HanXRQChr16g0507941' => 'han', 'HanXRQChr17g0560211' => 'han', 'Haze_02108' => 'cav', 'Haze_02428' => 'cav', 'Haze_05593' => 'cav', 'Haze_06448' => 'cav', 'Haze_09427' => 'cav', 'Haze_12022' => 'cav', 'Haze_17612' => 'cav', 'Haze_17928' => 'cav', 'Hma1.2p1_0032F.1_g019250' => 'hma', 'Hma1.2p1_0163F.1_g072690' => 'hma', 'Hma1.2p1_0265F.1_g106710' => 'hma', 'Hma1.2p1_0286F.1_g113970' => 'hma', 'Hma1.2p1_0363F.1_g136640' => 'hma', 'Hma1.2p1_0584F.1_g183470' => 'hma', 'Hma1.2p1_0885F.1_g232570' => 'hma', 'HPP92_006022' => 'vpl', 'HPP92_007320' => 'vpl', 'HPP92_011521' => 'vpl', 'HPP92_019387' => 'vpl', 'HPP92_024038' => 'vpl', 'Hund05891' => 'sun', 'Hund06450' => 'sun', 'Hund12053' => 'sun', 'Hund16800' => 'sun', 'Hund21222' => 'sun', 'Hund22896' => 'sun', 'Hund23746' => 'sun', 'Hund27083' => 'sun', 'Lalb_Chr02g0141831' => 'lal', 'Lalb_Chr02g0141841' => 'lal', 'Lalb_Chr05g0220411' => 'lal', 'Lalb_Chr06g0162081' => 'lal', 'Lalb_Chr09g0327651' => 'lal', 'Lalb_Chr13g0295051' => 'lal', 'Lalb_Chr15g0086801' => 'lal', 'Lalb_Chr16g0383781' => 'lal', 'Lalb_Chr16g0383791' => 'lal', 'Lalb_Chr18g0055441' => 'lal', 'Lalb_Chr18g0059611' => 'lal', 'Lalb_Chr20g0109661' => 'lal', 'Lalb_Chr20g0109831' => 'lal', 'Lalb_Chr20g0121871' => 'lal', 'Lalb_Chr22g0355361' => 'lal', 'Lalb_Chr25g0286371' => 'lal', 'Lj1A1187G43' => 'lonja', 'Lj1A1205T50' => 'lonja', 'Lj1A800G33' => 'lonja', 'Lj1C1187T7' => 'lonja', 'Lj1C843T11' => 'lonja', 'Lj1g0010940' => 'lja', 'Lj2A288T69' => 'lonja', 'Lj3g0024276' => 'lja', 'Lj4A47T76' => 'lonja', 'Lj4g0005805' => 'lja', 'Lj4g0006097' => 'lja', 'Lj4g0008528' => 'lja', 'Lj4g0024907' => 'lja', 'Lj5g0012472' => 'lja', 'Lj5g0018648' => 'lja', 'Lj6C789G1' => 'lonja', 'Lj6g0004000' => 'lja', 'Lj7A292G67' => 'lonja', 'Lj7A292T64' => 'lonja', 'Lj9A400T58' => 'lonja', 'Lsat_1_v5_gn_1_126181' => 'lsa', 'Lsat_1_v5_gn_4_123041' => 'lsa', 'Lsat_1_v5_gn_4_133620' => 'lsa', 'Lsat_1_v5_gn_4_53221' => 'lsa', 'Lsat_1_v5_gn_4_71961' => 'lsa', 'Lsat_1_v5_gn_7_105241' => 'lsa', 'Lsat_1_v5_gn_7_21361' => 'lsa', 'Lsat_1_v5_gn_7_28860' => 'lsa', 'Lsat_1_v5_gn_7_31260' => 'lsa', 'Lsat_1_v5_gn_8_52801' => 'lsa', 'Manes.02G191400' => 'mes', 'Manes.03G110100' => 'mes', 'Manes.04G071100' => 'mes', 'Manes.05G100500' => 'mes', 'Manes.05G164700' => 'mes', 'Manes.15G087000' => 'mes', 'Manes.15G121500' => 'mes', 'Manes.16G028300' => 'mes', 'Manes.17G046100' => 'mes', 'Manes.17G069800' => 'mes', 'Manes.18G100500' => 'mes', 'Mapoly0002s0109' => 'mpo', 'Mapoly0024s0007' => 'mpo', 'Mapoly0089s0032' => 'mpo', 'MBI04_g42241_MAGBIO' => 'mbi', 'MBI05_g11988_MAGBIO' => 'mbi', 'MBI05_g35452_MAGBIO' => 'mbi', 'MBI07_g30179_MAGBIO' => 'mbi', 'MBI07_g35859_MAGBIO' => 'mbi', 'MBI07_g35860_MAGBIO' => 'mbi', 'MBI07_g37166_MAGBIO' => 'mbi', 'MBI08_g18172_MAGBIO' => 'mbi', 'MBI09_g08441_MAGBIO' => 'mbi', 'MBI13_g01676_MAGBIO' => 'mbi', 'MBI14_g42955_MAGBIO' => 'mbi', 'MBI16_g13161_MAGBIO' => 'mbi', 'MBI17_g27204_MAGBIO' => 'mbi', 'MBI19_g21595_MAGBIO' => 'mbi', 'MD00G1148400' => 'mdo', 'MD02G1301200' => 'mdo', 'MD03G1227800' => 'mdo', 'MD05G1041100' => 'mdo', 'MD05G1124800' => 'mdo', 'MD05G1284000' => 'mdo', 'MD05G1338800' => 'mdo', 'MD05G1338900' => 'mdo', 'MD07G1022800' => 'mdo', 'MD10G1047500' => 'mdo', 'MD10G1127500' => 'mdo', 'MD10G1262300' => 'mdo', 'MD10G1293800' => 'mdo', 'MD16G1074300' => 'mdo', 'Medtr1g021670' => 'mtr', 'Medtr1g096320' => 'mtr', 'Medtr2g013690' => 'mtr', 'Medtr2g019450' => 'mtr', 'Medtr2g085170' => 'mtr', 'Medtr4g088785' => 'mtr', 'Medtr8g055930' => 'mtr', 'Medtr8g085850' => 'mtr', 'MELO3C002605.2' => 'cme', 'MELO3C003891.2' => 'cme', 'MELO3C004012.2' => 'cme', 'MELO3C007134.2' => 'cme', 'MELO3C008118.2' => 'cme', 'MELO3C016700.2' => 'cme', 'MELO3C024127.2' => 'cme', 'MELO3C033361.2' => 'cme', 'MELO3C033362.2' => 'cme', 'Migut.C00430' => 'egut', 'Migut.C01246' => 'egut', 'Migut.E00101' => 'egut', 'Migut.H01486' => 'egut', 'Migut.H01939' => 'egut', 'Migut.K00360' => 'egut', 'Migut.M00910' => 'egut', 'Migut.M01139' => 'egut', 'Migut.N02677' => 'egut', 'MSTRG.13252' => 'ama', 'MSTRG.14701' => 'ama', 'MSTRG.1521' => 'ama', 'MSTRG.15884' => 'ama', 'MSTRG.16242' => 'ama', 'MSTRG.22285' => 'ama', 'MSTRG.22444' => 'ama', 'MSTRG.2349' => 'ama', 'MSTRG.26308' => 'ama', 'MSTRG.28296' => 'ama', 'MSTRG.9895' => 'ama', 'Nitab4.5_0000110g0060' => 'nta', 'Nitab4.5_0000420g0130' => 'nta', 'Nitab4.5_0000422g0030' => 'nta', 'Nitab4.5_0000560g0180' => 'nta', 'Nitab4.5_0000703g0100' => 'nta', 'Nitab4.5_0000786g0200' => 'nta', 'Nitab4.5_0001336g0020' => 'nta', 'Nitab4.5_0001796g0030' => 'nta', 'Nitab4.5_0003348g0060' => 'nta', 'Nitab4.5_0003698g0040' => 'nta', 'Nitab4.5_0003942g0090' => 'nta', 'Nitab4.5_0004775g0070' => 'nta', 'Nitab4.5_0004864g0030' => 'nta', 'Nitab4.5_0005615g0020' => 'nta', 'Nitab4.5_0009288g0030' => 'nta', 'Nitab4.5_0009341g0010' => 'nta', 'Nitab4.5_0009535g0010' => 'nta', 'Nn1g03995' => 'nnu', 'Nn1g04100' => 'nnu', 'Nn1g06530' => 'nnu', 'Nn3g16404' => 'nnu', 'Nn3g17212' => 'nnu', 'Nn3g20776' => 'nnu', 'Nn3g21923' => 'nnu', 'Nn5g27737' => 'nnu', 'Nn5g29461' => 'nnu', 'Nn7g38355' => 'nnu', 'Nn8g39873' => 'nnu', 'Oeu000548.2' => 'oeu', 'Oeu004672.1' => 'oeu', 'Oeu015605.2' => 'oeu', 'Oeu016092.1' => 'oeu', 'Oeu017879.3' => 'oeu', 'Oeu024910.1' => 'oeu', 'Oeu028965.1' => 'oeu', 'Oeu031269.1' => 'oeu', 'Oeu031270.1' => 'oeu', 'Oeu032535.1' => 'oeu', 'Oeu034151.1' => 'oeu', 'Oeu034152.1' => 'oeu', 'Oeu034588.2' => 'oeu', 'Oeu050846.1' => 'oeu', 'Oeu050849.2' => 'oeu', 'Oeu051063.2' => 'oeu', 'Oeu052368.1' => 'oeu', 'Oeu052370.1' => 'oeu', 'Os01g0210400' => 'osa', 'Os01g0304300' => 'osa', 'Os01g0749100' => 'osa', 'Os02g0745800' => 'osa', 'Os03g0769050' => 'osa', 'Os05g0531500' => 'osa', 'Os06g0724300' => 'osa', 'Os11g0198100' => 'osa', 'Peaxi162Scf00069g01425' => 'pax', 'Peaxi162Scf00280g00811' => 'pax', 'Peaxi162Scf00310g00615' => 'pax', 'Peaxi162Scf00362g00542' => 'pax', 'Peaxi162Scf00461g00310' => 'pax', 'Peaxi162Scf00530g00118' => 'pax', 'Peaxi162Scf00541g00057' => 'pax', 'Peaxi162Scf00661g00017' => 'pax', 'Peaxi162Scf00926g00027' => 'pax', 'Peaxi162Scf01064g00263' => 'pax', 'Peaxi162Scf01211g00135' => 'pax', 'PGR004G2336' => 'pgr', 'PGR042G0327' => 'pgr', 'PGR042G1957' => 'pgr', 'PGR042G2003' => 'pgr', 'PGR042G3929' => 'pgr', 'PGR083G1137' => 'pgr', 'PGR083G1364' => 'pgr', 'PGSC0003DMG400003381' => 'stu', 'PGSC0003DMG400003417' => 'stu', 'PGSC0003DMG400008981' => 'stu', 'PGSC0003DMG400012417' => 'stu', 'PGSC0003DMG400012823' => 'stu', 'PGSC0003DMG400016885' => 'stu', 'PGSC0003DMG400022812' => 'stu', 'PGSC0003DMG400029726' => 'stu', 'PGSC0003DMG401009243' => 'stu', 'PGSC0003DMG401031505' => 'stu', 'PGSC0003DMG402031505' => 'stu', 'Phvul.001G017600' => 'pvu', 'Phvul.002G193500' => 'pvu', 'Phvul.002G228900' => 'pvu', 'Phvul.002G236800' => 'pvu', 'Phvul.003G049500' => 'pvu', 'Phvul.005G072000' => 'pvu', 'Phvul.006G164800' => 'pvu', 'Phvul.006G185100' => 'pvu', 'Phvul.007G090000' => 'pvu', 'Potri.001G399800' => 'ptr', 'Potri.002G149900' => 'ptr', 'Potri.004G044100' => 'ptr', 'Potri.004G177600' => 'ptr', 'Potri.009G138000' => 'ptr', 'Potri.010G094000' => 'ptr', 'Potri.011G053000' => 'ptr', 'Potri.011G119300' => 'ptr', 'Potri.013G113700' => 'ptr', 'Potri.018G107800' => 'ptr', 'Potri.019G084100' => 'ptr', 'Pp3c14_23720' => 'ppa', 'Pp3c16_6340' => 'ppa', 'Pp3c23_13420' => 'ppa', 'Pp3c24_2740' => 'ppa', 'Pp3c25_860' => 'ppa', 'Pp3c8_21750' => 'ppa', 'Prupe.1G273000' => 'ppe', 'Prupe.1G273700' => 'ppe', 'Prupe.1G274100' => 'ppe', 'Prupe.2G023300' => 'ppe', 'Prupe.4G048000' => 'ppe', 'Prupe.4G080400' => 'ppe', 'Prupe.4G181200' => 'ppe', 'Prupe.8G056900' => 'ppe', 'Prupe.8G168700' => 'ppe', 'Psat1g189080' => 'psa', 'Psat1g204760' => 'psa', 'Psat4g175560' => 'psa', 'Psat4g177720' => 'psa', 'Psat5g244240' => 'psa', 'Psat6g010720' => 'psa', 'Psat6g187200' => 'psa', 'Psat7g072040' => 'psa', 'PSO017G3501' => 'pso', 'PSO063G2148' => 'pso', 'PSO063G5608' => 'pso', 'PSO210G6392' => 'pso', 'PSO541G2319' => 'pso', 'PSO541G2836' => 'pso', 'PSO541G4012' => 'pso', 'PSO541G6253' => 'pso', 'PSO675G0580' => 'pso', 'PSO675G0856' => 'pso', 'PSO675G5635' => 'pso', 'PSO675G9157' => 'pso', 'PSO832G1660' => 'pso', 'PSO832G1969' => 'pso', 'QL02p007186' => 'qlo', 'QL02p033904' => 'qlo', 'QL03p064391' => 'qlo', 'QL05p040593' => 'qlo', 'QL05p058242' => 'qlo', 'QL08p021825' => 'qlo', 'QL11p004981' => 'qlo', 'RcHm_v2.0_Chr1g0318301' => 'rch', 'RcHm_v2.0_Chr4g0418501' => 'rch', 'RcHm_v2.0_Chr4g0439971' => 'rch', 'RcHm_v2.0_Chr5g0008541' => 'rch', 'RcHm_v2.0_Chr5g0014101' => 'rch', 'RcHm_v2.0_Chr5g0014131' => 'rch', 'RcHm_v2.0_Chr5g0033621' => 'rch', 'RcHm_v2.0_Chr6g0272041' => 'rch', 'RcHm_v2.0_Chr6g0278831' => 'rch', 'Rhsim02G0130400' => 'rsi', 'Rhsim02G0171100' => 'rsi', 'Rhsim05G0053000' => 'rsi', 'Rhsim05G0053100' => 'rsi', 'Rhsim06G0096500' => 'rsi', 'Rhsim06G0096600' => 'rsi', 'Rhsim06G0199100' => 'rsi', 'Rhsim12G0062300' => 'rsi', 'Rhsim12G0062800' => 'rsi', 'Sabra02G0118600' => 'sbr', 'Sabra04G0027300' => 'sbr', 'Sabra04G0119500' => 'sbr', 'Sabra08G0112500' => 'sbr', 'Sabra11G0036800' => 'sbr', 'Sabra11G0103800' => 'sbr', 'Sabra13G0096300' => 'sbr', 'Sabra16G0262300' => 'sbr', 'Sabra18G0091700' => 'sbr', 'Sabra19G0095400' => 'sbr', 'SalBow6G3080' => 'sbo', 'SalBow7G1157' => 'sbo', 'SalBow7G2123' => 'sbo', 'SalBow7G2285' => 'sbo', 'SalBow7G3537' => 'sbo', 'SalBow8G2947' => 'sbo', 'SalBow8G4463' => 'sbo', 'SalBow8G5466' => 'sbo', 'Sc01g0001750' => 'sci', 'Sc02g0006640' => 'sci', 'Sc02g0006670' => 'sci', 'Sc04g0008220' => 'sci', 'Sc05g0006190' => 'sci', 'Sc08g0002760' => 'sci', 'Sc17g0006170' => 'sci', 'Sc22g0002050' => 'sci', 'Sc23g0001190' => 'sci', 'Sc24g0000980' => 'sci', 'Sed0006245' => 'sed', 'Sed0007543' => 'sed', 'Sed0009411' => 'sed', 'Sed0010765' => 'sed', 'Sed0012944' => 'sed', 'Sed0014682' => 'sed', 'Sed0016174' => 'sed', 'Sed0016796' => 'sed', 'Sed0020317' => 'sed', 'Sed0021467' => 'sed', 'SEGI_01316' => 'sgi', 'SEGI_03374' => 'sgi', 'SEGI_16265' => 'sgi', 'SEGI_18569' => 'sgi', 'SEGI_20351' => 'sgi', 'SEGI_26395' => 'sgi', 'SEGI_29469' => 'sgi', 'SEGI_34771' => 'sgi', 'SEGI_36769' => 'sgi', 'SEGI_37139' => 'sgi', 'SGA_v2.0_scaffold100G29687' => 'sas', 'SGA_v2.0_scaffold118G32472' => 'sas', 'SGA_v2.0_scaffold14G07051' => 'sas', 'SGA_v2.0_scaffold183G39845' => 'sas', 'SGA_v2.0_scaffold1G00174' => 'sas', 'SGA_v2.0_scaffold22G09714' => 'sas', 'SGA_v2.0_scaffold333G48992' => 'sas', 'SGA_v2.0_scaffold46G17491' => 'sas', 'SGA_v2.0_scaffold49G18294' => 'sas', 'SGA_v2.0_scaffold63G21658' => 'sas', 'SHI01741' => 'shi', 'SHI05771' => 'shi', 'SHI18077' => 'shi', 'SHI20525' => 'shi', 'SHI20527' => 'shi', 'SHI20528' => 'shi', 'SMO172G0185' => 'smo', 'SMO198G0020' => 'smo', 'SMO351G0006' => 'smo', 'SMO356G0118' => 'smo', 'SMO358G0296' => 'smo', 'SMO367G0079' => 'smo', 'SMO367G1277' => 'smo', 'Solyc01g014220.3' => 'sly', 'Solyc01g111770.2' => 'sly', 'Solyc02g078180.3' => 'sly', 'Solyc03g006430.3' => 'sly', 'Solyc03g006456.1' => 'sly', 'Solyc03g079860.2' => 'sly', 'Solyc04g079770.3' => 'sly', 'Solyc05g007430.4' => 'sly', 'Solyc07g063150.3' => 'sly', 'Solyc08g016620.3' => 'sly', 'Solyc09g057590.3' => 'sly', 'Solyc09g057600.1' => 'sly', 'Solyc10g009050.3' => 'sly', 'Solyc11g017420.2' => 'sly', 'Sopen01g053810' => 'spe', 'Sopen02g023040' => 'spe', 'Sopen03g002440' => 'spe', 'Sopen04g033350' => 'spe', 'Sopen05g003310' => 'spe', 'Sopen07g004050' => 'spe', 'Sopen07g031340' => 'spe', 'Sopen08g006990' => 'spe', 'Sopen10g004830' => 'spe', 'Sopen11g009370' => 'spe', 'Sp1g24450' => 'spa', 'Sp1g29670' => 'spa', 'Sp1g39600' => 'spa', 'Sp2g11080' => 'spa', 'Sp2g13970' => 'spa', 'Sp4g16130' => 'spa', 'Sp6g13080' => 'spa', 'Sp7g37270' => 'spa', 'TAR371G0065' => 'tar', 'TAR376G0340' => 'tar', 'TAR376G0435' => 'tar', 'TAR381G0002' => 'tar', 'TAR381G1236' => 'tar', 'TAR624G0055' => 'tar', 'TAR624G0324' => 'tar', 'TAR624G0696' => 'tar', 'TAR624G0906' => 'tar', 'TAR625G0107' => 'tar', 'TAR626G0015' => 'tar', 'TAR626G1356' => 'tar', 'TAR627G0888' => 'tar', 'TAR628G0399' => 'tar', 'TAR628G1327' => 'tar', 'TAR629G2831' => 'tar', 'TAR629G2874' => 'tar', 'TAR633G1432' => 'tar', 'TAR633G2771' => 'tar', 'THA.LOC104803394' => 'tha', 'THA.LOC104805153' => 'tha', 'THA.LOC104806784' => 'tha', 'THA.LOC104810473' => 'tha', 'THA.LOC104813100' => 'tha', 'THA.LOC104814215' => 'tha', 'THA.LOC104815554' => 'tha', 'THA.LOC104820544' => 'tha', 'THA.LOC104824754' => 'tha', 'THA.LOC104827717' => 'tha', 'Thecc.02G031400' => 'tca', 'Thecc.02G055900' => 'tca', 'Thecc.02G350800' => 'tca', 'Thecc.06G150900' => 'tca', 'Thecc.06G186600' => 'tca', 'Thecc.07G089600' => 'tca', 'Thecc.08G020400' => 'tca', 'Thecc.08G182100' => 'tca', 'Thhalv10000873m.g' => 'esa', 'Thhalv10004185m.g' => 'esa', 'Thhalv10006981m.g' => 'esa', 'Thhalv10007204m.g' => 'esa', 'Thhalv10011374m.g' => 'esa', 'Thhalv10013482m.g' => 'esa', 'Thhalv10017801m.g' => 'esa', 'Thhalv10024983m.g' => 'esa', 'TPR.G12072' => 'tpr', 'TPR.G15769' => 'tpr', 'TPR.G16504' => 'tpr', 'TPR.G16506' => 'tpr', 'TPR.G24345' => 'tpr', 'TPR.G26666' => 'tpr', 'TPR.G27320' => 'tpr', 'TPR.G31819' => 'tpr', 'TPR.G38879' => 'tpr', 'TPR.G39015' => 'tpr', 'TPR.G8819' => 'tpr', 'TWI09G0924' => 'twi', 'TWI12G0811' => 'twi', 'TWI12G1294' => 'twi', 'TWI31G0150' => 'twi', 'TWI36G1262' => 'twi', 'TWI38G1287' => 'twi', 'TWI38G1633' => 'twi', 'TWI38G1982' => 'twi', 'TWI39G0116' => 'twi', 'TWI60G1011' => 'twi', 'TWI63G0171' => 'twi', 'TWI73G0839' => 'twi', 'TWI79G1511' => 'twi', 'unitig_0.g915' => 'ugi', 'unitig_0.g916' => 'ugi', 'unitig_21.g20219' => 'ugi', 'unitig_21.g20416' => 'ugi', 'unitig_578.g16132' => 'ugi', 'unitig_578.g16718' => 'ugi', 'unitig_62.g23481' => 'ugi', 'unitig_744.g24535' => 'ugi', 'unitig_749.g13525' => 'ugi', 'vmacro01248' => 'vma', 'vmacro02290' => 'vma', 'vmacro10946' => 'vma', 'vmacro11865' => 'vma', 'vmacro12493' => 'vma', 'vmacro17322' => 'vma', 'vmacro21599' => 'vma', 'vmacro23041' => 'vma', 'VMungo0251G0004' => 'vmu', 'VMungo0251G2639' => 'vmu', 'VMungo0251G2967' => 'vmu', 'VMungo0540G0864' => 'vmu', 'VMungo0540G1569' => 'vmu', 'VMungo0647G0317' => 'vmu', 'VMungo0720G1373' => 'vmu', 'VMungo0720G1508' => 'vmu', 'VMungo1080G0485' => 'vmu', 'VMungo1215G3177' => 'vmu', 'Zm00001eb112600' => 'zma', 'Zm00001eb120220' => 'zma', 'Zm00001eb153240' => 'zma', 'Zm00001eb168880' => 'zma', 'Zm00001eb213920' => 'zma', 'Zm00001eb228280' => 'zma', 'Zm00001eb254580' => 'zma', 'Zm00001eb272180' => 'zma', 'Zm00001eb293190' => 'zma', 'Zm00001eb322930' => 'zma', 'Zm00001eb353360' => 'zma', 'Zm00001eb353390' => 'zma', 'Zm00001eb353430' => 'zma', 'Zm00001eb353440' => 'zma', 'Zm00001eb353780' => 'zma' ), 'gf_id' => 'HOM05D000499', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000499' ), 'data_identifier' => 'HOM05D000499', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000499', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1066', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p29780' => 'bna', 'A02p33180' => 'bna', 'A03p16470' => 'bna', 'A03p66010' => 'bna', 'A04p25970' => 'bna', 'A06p01270' => 'bna', 'A06p46080' => 'bna', 'A07p11400' => 'bna', 'A08p01840' => 'bna', 'A08p08230' => 'bna', 'A08p25740' => 'bna', 'A09p32070' => 'bna', 'A09p37830' => 'bna', 'A09p42840' => 'bna', 'A09p42850' => 'bna', 'Aa31LG10G2060' => 'aar', 'Aa31LG2G7410' => 'aar', 'Aa31LG6G10200' => 'aar', 'Aa31LG6G16680' => 'aar', 'Aa31LG6G8470' => 'aar', 'Aa31LG9G12730' => 'aar', 'Aa31LG9G13680' => 'aar', 'Aa31LG9G14920' => 'aar', 'Aa31LG9G6650' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4977' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5467' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3254' => 'aag', 'Actinidia02578' => 'ach', 'Actinidia07693' => 'ach', 'Actinidia08413' => 'ach', 'Actinidia08414' => 'ach', 'Actinidia15289' => 'ach', 'Actinidia19871' => 'ach', 'Actinidia21475' => 'ach', 'Actinidia22576' => 'ach', 'Actinidia28327' => 'ach', 'Actinidia32491' => 'ach', 'Actinidia39463' => 'ach', 'Actinidia39571' => 'ach', 'Ah.01g013750' => 'amhyb', 'Ah.01g023210' => 'amhyb', 'Ah.04g164850' => 'amhyb', 'Ah.05g178060' => 'amhyb', 'Ah.07g204270' => 'amhyb', 'Ah.07g208480' => 'amhyb', 'Ah.09g237410' => 'amhyb', 'Ah.14g089460' => 'amhyb', 'AL1G41790' => 'aly', 'AL1G49050' => 'aly', 'AL1G53810' => 'aly', 'AL1G61400' => 'aly', 'AL4G18580' => 'aly', 'AL5G12510' => 'aly', 'AL5G12540' => 'aly', 'AL6G43230' => 'aly', 'AL7G10370' => 'aly', 'AL7G19250' => 'aly', 'AL8G12240' => 'aly', 'AL8G18540' => 'aly', 'Aqoxy1G02409' => 'aox', 'Aqoxy2G03993' => 'aox', 'Aqoxy3G03357' => 'aox', 'Aqoxy4G00785' => 'aox', 'Aqoxy5G02598' => 'aox', 'Aqoxy6G00132' => 'aox', 'Aqoxy7G01776' => 'aox', 'Aqoxy7G02316' => 'aox', 'Aqoxy7G03973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.12AFKW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B8730' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27IQR1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3F75VG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3RE0GA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41TCQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.527VTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FIR39' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5W8UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DA38EV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ63HS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H1I32C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HC27T5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4M8AP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7N3CZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9UVDZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LS1NQA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT1D4B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SKC4TM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCFV76' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF9Q1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQWD9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1ZM88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WE07RT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YCK7VH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJE6Q6' => 'arhy', 'AT1G28240' => 'ath', 'AT1G34550' => 'ath', 'AT1G53040' => 'ath', 'AT2G02910' => 'ath', 'AT4G09630' => 'ath', 'AT4G38500' => 'ath', 'AT5G42660' => 'ath', 'AT5G46220' => 'ath', 'ATR0152G026' => 'atr', 'ATR0564G343' => 'atr', 'ATR0706G151' => 'atr', 'ATR0733G207' => 'atr', 'ATR0751G234' => 'atr', 'ATR0807G048' => 'atr', 'ATR1091G084' => 'atr', 'Atru.chr10.1229' => 'acertr', 'Atru.chr10.1230' => 'acertr', 'Atru.chr10.1874' => 'acertr', 'Atru.chr11.1808' => 'acertr', 'Atru.chr13.1795' => 'acertr', 'Atru.chr13.570' => 'acertr', 'Atru.chr2.2608' => 'acertr', 'Atru.chr2.2609' => 'acertr', 'Atru.chr5.3428' => 'acertr', 'Atru.chr8.1171' => 'acertr', 'AUR62004651' => 'cqu', 'AUR62008675' => 'cqu', 'AUR62010014' => 'cqu', 'AUR62013004' => 'cqu', 'AUR62014825' => 'cqu', 'AUR62015015' => 'cqu', 'AUR62015151' => 'cqu', 'AUR62017020' => 'cqu', 'AUR62019422' => 'cqu', 'AUR62023570' => 'cqu', 'AUR62025571' => 'cqu', 'AUR62029098' => 'cqu', 'AUR62033863' => 'cqu', 'AUR62034296' => 'cqu', 'AUR62040075' => 'cqu', 'BcaB02g07334' => 'bca', 'BcaB02g10575' => 'bca', 'BcaB03g12119' => 'bca', 'BcaB03g12120' => 'bca', 'BcaB03g13945' => 'bca', 'BcaB04g17123' => 'bca', 'BcaB04g17867' => 'bca', 'BcaB04g19839' => 'bca', 'BcaB07g30317' => 'bca', 'BcaB07g32432' => 'bca', 'BcaB07g33362' => 'bca', 'BcaB08g36611' => 'bca', 'BcaC01g00028' => 'bca', 'BcaC01g01356' => 'bca', 'BcaC01g02034' => 'bca', 'BcaC01g06051' => 'bca', 'BcaC03g16839' => 'bca', 'BcaC03g17176' => 'bca', 'BcaC05g26829' => 'bca', 'BcaC06g31490' => 'bca', 'BcaC06g35344' => 'bca', 'BcaC06g36570' => 'bca', 'BcaC07g37537' => 'bca', 'BcaC08g43491' => 'bca', 'BcaC08g43773' => 'bca', 'BcaNung00234' => 'bca', 'BcaNung01982' => 'bca', 'BcaNung03707' => 'bca', 'BcaNung06454' => 'bca', 'BolC2t10762H' => 'bol', 'BolC2t11191H' => 'bol', 'BolC3t14322H' => 'bol', 'BolC3t19747H' => 'bol', 'BolC3t21425H' => 'bol', 'BolC4t27800H' => 'bol', 'BolC5t31423H' => 'bol', 'BolC6t35951H' => 'bol', 'BolC6t36282H' => 'bol', 'BolC7t40678H' => 'bol', 'BolC7t40679H' => 'bol', 'BolC7t42222H' => 'bol', 'BolC7t43492H' => 'bol', 'BolC7t46785H' => 'bol', 'BolC8t47853H' => 'bol', 'BolC9t56805H' => 'bol', 'BraA02t08000Z' => 'bra', 'BraA02t08341Z' => 'bra', 'BraA03t10936Z' => 'bra', 'BraA03t15657Z' => 'bra', 'BraA04t18100Z' => 'bra', 'BraA05t20523Z' => 'bra', 'BraA06t23353Z' => 'bra', 'BraA06t27473Z' => 'bra', 'BraA06t27769Z' => 'bra', 'BraA07t28928Z' => 'bra', 'BraA08t32236Z' => 'bra', 'BraA08t32841Z' => 'bra', 'BraA08t34524Z' => 'bra', 'BraA09t38742Z' => 'bra', 'BraA09t39295Z' => 'bra', 'C02p47180' => 'bna', 'C02p50990' => 'bna', 'C03p19360' => 'bna', 'C03p74950' => 'bna', 'C03p91000' => 'bna', 'C04p63260' => 'bna', 'C05p27050' => 'bna', 'C06p08750' => 'bna', 'C06p11490' => 'bna', 'C07p02820' => 'bna', 'C07p17180' => 'bna', 'C07p29440' => 'bna', 'C07p63730' => 'bna', 'C09p39260' => 'bna', 'CAN.G1164.34' => 'can', 'CAN.G1164.39' => 'can', 'CAN.G1530.3' => 'can', 'CAN.G162.61' => 'can', 'CAN.G176.6' => 'can', 'CAN.G289.49' => 'can', 'CAN.G370.21' => 'can', 'CAN.G370.22' => 'can', 'CAN.G371.117' => 'can', 'CAN.G58.37' => 'can', 'CAN.G588.98' => 'can', 'CANSAT21G2266' => 'cansat', 'CANSAT25G2799' => 'cansat', 'CANSAT35G0862' => 'cansat', 'CANSAT35G1704' => 'cansat', 'CANSAT35G1760' => 'cansat', 'CANSAT56G3971' => 'cansat', 'CANSAT56G4116' => 'cansat', 'CANSAT80G1259' => 'cansat', 'CARHR027730' => 'chi', 'CARHR033880' => 'chi', 'CARHR043270' => 'chi', 'CARHR145330' => 'chi', 'CARHR145340' => 'chi', 'CARHR175570' => 'chi', 'CARHR181570' => 'chi', 'CARHR258470' => 'chi', 'CARHR260490' => 'chi', 'CARHR294220' => 'chi', 'Carub.0001s2668' => 'cru', 'Carub.0001s3257' => 'cru', 'Carub.0001s4220' => 'cru', 'Carub.0005s0179' => 'cru', 'Carub.0006s2807' => 'cru', 'Carub.0007s0039' => 'cru', 'Carub.0008s0169' => 'cru', 'Carub.0008s0636' => 'cru', 'Ca_00338_v3' => 'car', 'Ca_00542_v3' => 'car', 'Ca_01844_v3' => 'car', 'Ca_10611_v3' => 'car', 'Ca_13326_v3' => 'car', 'Ca_17944_v3' => 'car', 'Ca_18546_v3' => 'car', 'Ca_24219_v3' => 'car', 'Ca_29972_v3' => 'car', 'CBR_g3681' => 'cbr', 'CBR_g40021' => 'cbr', 'Cc01_g08140' => 'ccan', 'Cc02_g13410' => 'ccan', 'Cc02_g37480' => 'ccan', 'Cc05_g12030' => 'ccan', 'Cc09_g03370' => 'ccan', 'Cc09_g10300' => 'ccan', 'Cc10_g03530' => 'ccan', 'Cc10_g11380' => 'ccan', 'CDE01G0176' => 'cde', 'CDE02G0675' => 'cde', 'CDE02G0942' => 'cde', 'CDE02G1153' => 'cde', 'CDE02G4177' => 'cde', 'CDE04G2117' => 'cde', 'CDE04G2736' => 'cde', 'CDE08G1161' => 'cde', 'CDE09G1238' => 'cde', 'Cfa000467' => 'cfa', 'Cfa000947' => 'cfa', 'Cfa004969' => 'cfa', 'Cfa005284' => 'cfa', 'Cfa008993' => 'cfa', 'Cfa018187' => 'cfa', 'Cfa018454' => 'cfa', 'Cfa020585' => 'cfa', 'Ciclev10000424m.g' => 'ccl', 'Ciclev10003605m.g' => 'ccl', 'Ciclev10007828m.g' => 'ccl', 'Ciclev10014620m.g' => 'ccl', 'Ciclev10015169m.g' => 'ccl', 'Ciclev10018291m.g' => 'ccl', 'Ciclev10028256m.g' => 'ccl', 'Ciclev10033822m.g' => 'ccl', 'CiPaw.05G060300' => 'cil', 'CiPaw.05G085000' => 'cil', 'CiPaw.06G083700' => 'cil', 'CiPaw.06G120300' => 'cil', 'CiPaw.09G060500' => 'cil', 'CiPaw.09G123800' => 'cil', 'CiPaw.11G169700' => 'cil', 'CiPaw.12G118300' => 'cil', 'CiPaw.15G071000' => 'cil', 'CiPaw.15G081900' => 'cil', 'ClCG01G024610' => 'cla', 'ClCG03G006070' => 'cla', 'ClCG05G019250' => 'cla', 'ClCG09G009500' => 'cla', 'ClCG11G008200' => 'cla', 'ClCG11G018080' => 'cla', 'COL.COLO4_17373' => 'col', 'COL.COLO4_22994' => 'col', 'COL.COLO4_26389' => 'col', 'COL.COLO4_27170' => 'col', 'COL.COLO4_31074' => 'col', 'COL.COLO4_31465' => 'col', 'COL.COLO4_36438' => 'col', 'COL.COLO4_36439' => 'col', 'Cpa.g.c38781' => 'cpa', 'Cpa.g.sc128.12' => 'cpa', 'Cpa.g.sc166.7' => 'cpa', 'Cpa.g.sc166.8' => 'cpa', 'Cpa.g.sc20.111' => 'cpa', 'Cpa.g.sc27.31' => 'cpa', 'Cpa.g.sc64.36' => 'cpa', 'Cpa.g.sc64.37' => 'cpa', 'Cpa.g.sc66.49' => 'cpa', 'Cpa.g.sc80.64' => 'cpa', 'CsaV3_1G012320' => 'csa', 'CsaV3_2G008480' => 'csa', 'CsaV3_2G033450' => 'csa', 'CsaV3_3G044830' => 'csa', 'CsaV3_4G033710' => 'csa', 'CsaV3_6G051730' => 'csa', 'CsaV3_7G025350' => 'csa', 'CSS0001067' => 'camsi', 'CSS0005996' => 'camsi', 'CSS0006590' => 'camsi', 'CSS0009673' => 'camsi', 'CSS0010201' => 'camsi', 'CSS0010549' => 'camsi', 'CSS0011364' => 'camsi', 'CSS0014473' => 'camsi', 'CSS0014961' => 'camsi', 'CSS0020191' => 'camsi', 'CSS0021165' => 'camsi', 'CSS0022306' => 'camsi', 'CSS0030591' => 'camsi', 'CSS0030696' => 'camsi', 'CSS0032653' => 'camsi', 'CSS0037487' => 'camsi', 'CSS0041102' => 'camsi', 'CSS0041261' => 'camsi', 'CSS0046246' => 'camsi', 'CSS0049256' => 'camsi', 'DCAR_004075' => 'dca', 'DCAR_011538' => 'dca', 'DCAR_019553' => 'dca', 'DCAR_020952' => 'dca', 'DCAR_021739' => 'dca', 'DCAR_027407' => 'dca', 'DCAR_027913' => 'dca', 'DCAR_028066' => 'dca', 'Dinv05899' => 'din', 'Dinv07563' => 'din', 'Dinv08010' => 'din', 'Dinv14125' => 'din', 'Dinv20172' => 'din', 'Dinv30743' => 'din', 'Dinv31229' => 'din', 'Dinv34162' => 'din', 'Dinv36028' => 'din', 'Dinv39368' => 'din', 'Dinv40565' => 'din', 'Dinv41706' => 'din', 'Duzib052G0089' => 'dzi', 'Duzib116G0641' => 'dzi', 'Duzib132G0069' => 'dzi', 'Duzib132G1219' => 'dzi', 'Duzib147G0278' => 'dzi', 'Duzib160G0480' => 'dzi', 'Duzib170G0661' => 'dzi', 'Duzib177G0591' => 'dzi', 'Duzib187G1353' => 'dzi', 'Duzib192G0858' => 'dzi', 'Duzib192G0883' => 'dzi', 'Duzib213G0506' => 'dzi', 'Duzib235G0289' => 'dzi', 'Duzib251G0422' => 'dzi', 'ECA232G3898' => 'eca', 'ECA233G5950' => 'eca', 'ECA234G1699' => 'eca', 'ECA234G2421' => 'eca', 'ECA236G0426' => 'eca', 'ECA236G4331' => 'eca', 'ECA248G2573' => 'eca', 'EL10Ac1g00077' => 'bvu', 'EL10Ac1g01746' => 'bvu', 'EL10Ac2g03464' => 'bvu', 'EL10Ac4g08176' => 'bvu', 'EL10Ac7g17521' => 'bvu', 'EL10Ac8g20386' => 'bvu', 'EL10Ac9g21343' => 'bvu', 'EL10Ac9g22688' => 'bvu', 'Eucgr.B03434' => 'egr', 'Eucgr.D00618' => 'egr', 'Eucgr.E02395' => 'egr', 'Eucgr.F01129' => 'egr', 'Eucgr.F02622' => 'egr', 'Eucgr.F04207' => 'egr', 'FAN01G0570' => 'fan', 'FAN03G3351' => 'fan', 'FAN06G3702' => 'fan', 'FAN07G2149' => 'fan', 'FAN10G3758' => 'fan', 'FAN11G1170' => 'fan', 'FAN11G2050' => 'fan', 'FAN11G2724' => 'fan', 'FAN12G1700' => 'fan', 'FAN12G2028' => 'fan', 'FAN15G1160' => 'fan', 'FAN15G3063' => 'fan', 'FAN16G2540' => 'fan', 'FAN16G3077' => 'fan', 'FAN16G3624' => 'fan', 'FAN17G0221' => 'fan', 'FAN20G2492' => 'fan', 'FAN20G2905' => 'fan', 'FAN21G0548' => 'fan', 'FAN21G1300' => 'fan', 'FAN22G0077' => 'fan', 'FAN22G1315' => 'fan', 'FAN24G1280' => 'fan', 'FAN24G1445' => 'fan', 'FAN24G3527' => 'fan', 'FAN25G0464' => 'fan', 'FAN25G2885' => 'fan', 'FAN25G3270' => 'fan', 'FAN27G1101' => 'fan', 'FAN27G2846' => 'fan', 'FAN27G3524' => 'fan', 'FvH4_2g11770' => 'fve', 'FvH4_2g15630' => 'fve', 'FvH4_3g05570' => 'fve', 'FvH4_3g09110' => 'fve', 'FvH4_3g19940' => 'fve', 'FvH4_4g04821' => 'fve', 'FvH4_4g31480' => 'fve', 'FvH4_7g01740' => 'fve', 'Glyma.05G130400' => 'gma', 'Glyma.05G156400' => 'gma', 'Glyma.07G197000' => 'gma', 'Glyma.08G085151' => 'gma', 'Glyma.08G114500' => 'gma', 'Glyma.08G300400' => 'gma', 'Glyma.10G215800' => 'gma', 'Glyma.12G224400' => 'gma', 'Glyma.13G179300' => 'gma', 'Glyma.13G218151' => 'gma', 'Glyma.13G238800' => 'gma', 'Glyma.13G276900' => 'gma', 'Glyma.14G078200' => 'gma', 'Glyma.15G074500' => 'gma', 'Glyma.15G094100' => 'gma', 'Glyma.17G247200' => 'gma', 'Glyma.18G120100' => 'gma', 'Glyma.20G176000' => 'gma', 'Gohir.A01G063600' => 'ghi', 'Gohir.A01G170301' => 'ghi', 'Gohir.A02G060500' => 'ghi', 'Gohir.A05G133850' => 'ghi', 'Gohir.A05G161400' => 'ghi', 'Gohir.A06G012900' => 'ghi', 'Gohir.A06G035901' => 'ghi', 'Gohir.A06G127100' => 'ghi', 'Gohir.A06G210500' => 'ghi', 'Gohir.A08G008650' => 'ghi', 'Gohir.A09G072700' => 'ghi', 'Gohir.A09G088301' => 'ghi', 'Gohir.A10G040600' => 'ghi', 'Gohir.A12G036300' => 'ghi', 'Gohir.A12G143350' => 'ghi', 'Gohir.A12G165500' => 'ghi', 'Gohir.A13G145700' => 'ghi', 'Gohir.D01G050000' => 'ghi', 'Gohir.D01G051366' => 'ghi', 'Gohir.D01G161350' => 'ghi', 'Gohir.D02G065900' => 'ghi', 'Gohir.D05G164200' => 'ghi', 'Gohir.D05G355500' => 'ghi', 'Gohir.D06G010400' => 'ghi', 'Gohir.D06G111250' => 'ghi', 'Gohir.D06G132000' => 'ghi', 'Gohir.D06G210500' => 'ghi', 'Gohir.D07G165675' => 'ghi', 'Gohir.D08G062240' => 'ghi', 'Gohir.D08G086101' => 'ghi', 'Gohir.D08G138060' => 'ghi', 'Gohir.D09G072300' => 'ghi', 'Gohir.D10G041400' => 'ghi', 'Gohir.D11G191020' => 'ghi', 'Gohir.D11G212066' => 'ghi', 'Gohir.D12G036300' => 'ghi', 'Gohir.D12G168600' => 'ghi', 'Gohir.D13G150600' => 'ghi', 'Gorai.001G057300' => 'gra', 'Gorai.002G069900' => 'gra', 'Gorai.002G200000' => 'gra', 'Gorai.003G067600' => 'gra', 'Gorai.005G074800' => 'gra', 'Gorai.006G087300' => 'gra', 'Gorai.008G037500' => 'gra', 'Gorai.008G181400' => 'gra', 'Gorai.009G169400' => 'gra', 'Gorai.009G387900' => 'gra', 'Gorai.010G013300' => 'gra', 'Gorai.010G153800' => 'gra', 'Gorai.010G255800' => 'gra', 'Gorai.011G043700' => 'gra', 'Gorai.011G198900' => 'gra', 'Gorai.013G168400' => 'gra', 'GSVIVG01005212001' => 'vvi', 'GSVIVG01006163001' => 'vvi', 'GSVIVG01009625001' => 'vvi', 'GSVIVG01014338001' => 'vvi', 'GSVIVG01020005001' => 'vvi', 'GSVIVG01021450001' => 'vvi', 'GSVIVG01023975001' => 'vvi', 'GSVIVG01034490001' => 'vvi', 'HanXRQChr04g0112071' => 'han', 'HanXRQChr05g0131151' => 'han', 'HanXRQChr09g0262371' => 'han', 'HanXRQChr09g0268401' => 'han', 'HanXRQChr10g0279241' => 'han', 'HanXRQChr10g0297961' => 'han', 'HanXRQChr11g0326231' => 'han', 'HanXRQChr11g0328471' => 'han', 'HanXRQChr16g0507941' => 'han', 'HanXRQChr17g0560211' => 'han', 'Haze_02108' => 'cav', 'Haze_02428' => 'cav', 'Haze_05593' => 'cav', 'Haze_06448' => 'cav', 'Haze_09427' => 'cav', 'Haze_12022' => 'cav', 'Haze_17612' => 'cav', 'Haze_17928' => 'cav', 'Hma1.2p1_0032F.1_g019250' => 'hma', 'Hma1.2p1_0163F.1_g072690' => 'hma', 'Hma1.2p1_0265F.1_g106710' => 'hma', 'Hma1.2p1_0286F.1_g113970' => 'hma', 'Hma1.2p1_0363F.1_g136640' => 'hma', 'Hma1.2p1_0584F.1_g183470' => 'hma', 'Hma1.2p1_0885F.1_g232570' => 'hma', 'HPP92_006022' => 'vpl', 'HPP92_007320' => 'vpl', 'HPP92_011521' => 'vpl', 'HPP92_019387' => 'vpl', 'HPP92_024038' => 'vpl', 'Hund05891' => 'sun', 'Hund06450' => 'sun', 'Hund12053' => 'sun', 'Hund16800' => 'sun', 'Hund21222' => 'sun', 'Hund22896' => 'sun', 'Hund23746' => 'sun', 'Hund27083' => 'sun', 'Lalb_Chr02g0141831' => 'lal', 'Lalb_Chr02g0141841' => 'lal', 'Lalb_Chr05g0220411' => 'lal', 'Lalb_Chr06g0162081' => 'lal', 'Lalb_Chr09g0327651' => 'lal', 'Lalb_Chr13g0295051' => 'lal', 'Lalb_Chr15g0086801' => 'lal', 'Lalb_Chr16g0383781' => 'lal', 'Lalb_Chr16g0383791' => 'lal', 'Lalb_Chr18g0055441' => 'lal', 'Lalb_Chr18g0059611' => 'lal', 'Lalb_Chr20g0109661' => 'lal', 'Lalb_Chr20g0109831' => 'lal', 'Lalb_Chr20g0121871' => 'lal', 'Lalb_Chr22g0355361' => 'lal', 'Lalb_Chr25g0286371' => 'lal', 'Lj1A1187G43' => 'lonja', 'Lj1A1205T50' => 'lonja', 'Lj1A800G33' => 'lonja', 'Lj1C1187T7' => 'lonja', 'Lj1C843T11' => 'lonja', 'Lj1g0010940' => 'lja', 'Lj2A288T69' => 'lonja', 'Lj3g0024276' => 'lja', 'Lj4A47T76' => 'lonja', 'Lj4g0005805' => 'lja', 'Lj4g0006097' => 'lja', 'Lj4g0008528' => 'lja', 'Lj4g0024907' => 'lja', 'Lj5g0012472' => 'lja', 'Lj5g0018648' => 'lja', 'Lj6C789G1' => 'lonja', 'Lj6g0004000' => 'lja', 'Lj7A292G67' => 'lonja', 'Lj7A292T64' => 'lonja', 'Lj9A400T58' => 'lonja', 'Lsat_1_v5_gn_1_126181' => 'lsa', 'Lsat_1_v5_gn_4_123041' => 'lsa', 'Lsat_1_v5_gn_4_133620' => 'lsa', 'Lsat_1_v5_gn_4_53221' => 'lsa', 'Lsat_1_v5_gn_4_71961' => 'lsa', 'Lsat_1_v5_gn_7_105241' => 'lsa', 'Lsat_1_v5_gn_7_21361' => 'lsa', 'Lsat_1_v5_gn_7_28860' => 'lsa', 'Lsat_1_v5_gn_7_31260' => 'lsa', 'Lsat_1_v5_gn_8_52801' => 'lsa', 'Manes.02G191400' => 'mes', 'Manes.03G110100' => 'mes', 'Manes.04G071100' => 'mes', 'Manes.05G100500' => 'mes', 'Manes.05G164700' => 'mes', 'Manes.15G087000' => 'mes', 'Manes.15G121500' => 'mes', 'Manes.16G028300' => 'mes', 'Manes.17G046100' => 'mes', 'Manes.17G069800' => 'mes', 'Manes.18G100500' => 'mes', 'Mapoly0002s0109' => 'mpo', 'Mapoly0024s0007' => 'mpo', 'Mapoly0089s0032' => 'mpo', 'MBI04_g42241_MAGBIO' => 'mbi', 'MBI05_g11988_MAGBIO' => 'mbi', 'MBI05_g35452_MAGBIO' => 'mbi', 'MBI07_g30179_MAGBIO' => 'mbi', 'MBI07_g35859_MAGBIO' => 'mbi', 'MBI07_g35860_MAGBIO' => 'mbi', 'MBI07_g37166_MAGBIO' => 'mbi', 'MBI08_g18172_MAGBIO' => 'mbi', 'MBI09_g08441_MAGBIO' => 'mbi', 'MBI13_g01676_MAGBIO' => 'mbi', 'MBI14_g42955_MAGBIO' => 'mbi', 'MBI16_g13161_MAGBIO' => 'mbi', 'MBI17_g27204_MAGBIO' => 'mbi', 'MBI19_g21595_MAGBIO' => 'mbi', 'MD00G1148400' => 'mdo', 'MD02G1301200' => 'mdo', 'MD03G1227800' => 'mdo', 'MD05G1041100' => 'mdo', 'MD05G1124800' => 'mdo', 'MD05G1284000' => 'mdo', 'MD05G1338800' => 'mdo', 'MD05G1338900' => 'mdo', 'MD07G1022800' => 'mdo', 'MD10G1047500' => 'mdo', 'MD10G1127500' => 'mdo', 'MD10G1262300' => 'mdo', 'MD10G1293800' => 'mdo', 'MD16G1074300' => 'mdo', 'Medtr1g021670' => 'mtr', 'Medtr1g096320' => 'mtr', 'Medtr2g013690' => 'mtr', 'Medtr2g019450' => 'mtr', 'Medtr2g085170' => 'mtr', 'Medtr4g088785' => 'mtr', 'Medtr8g055930' => 'mtr', 'Medtr8g085850' => 'mtr', 'MELO3C002605.2' => 'cme', 'MELO3C003891.2' => 'cme', 'MELO3C004012.2' => 'cme', 'MELO3C007134.2' => 'cme', 'MELO3C008118.2' => 'cme', 'MELO3C016700.2' => 'cme', 'MELO3C024127.2' => 'cme', 'MELO3C033361.2' => 'cme', 'MELO3C033362.2' => 'cme', 'Migut.C00430' => 'egut', 'Migut.C01246' => 'egut', 'Migut.E00101' => 'egut', 'Migut.H01486' => 'egut', 'Migut.H01939' => 'egut', 'Migut.K00360' => 'egut', 'Migut.M00910' => 'egut', 'Migut.M01139' => 'egut', 'Migut.N02677' => 'egut', 'MSTRG.13252' => 'ama', 'MSTRG.14701' => 'ama', 'MSTRG.1521' => 'ama', 'MSTRG.15884' => 'ama', 'MSTRG.16242' => 'ama', 'MSTRG.22285' => 'ama', 'MSTRG.22444' => 'ama', 'MSTRG.2349' => 'ama', 'MSTRG.26308' => 'ama', 'MSTRG.28296' => 'ama', 'MSTRG.9895' => 'ama', 'Nitab4.5_0000110g0060' => 'nta', 'Nitab4.5_0000420g0130' => 'nta', 'Nitab4.5_0000422g0030' => 'nta', 'Nitab4.5_0000560g0180' => 'nta', 'Nitab4.5_0000703g0100' => 'nta', 'Nitab4.5_0000786g0200' => 'nta', 'Nitab4.5_0001336g0020' => 'nta', 'Nitab4.5_0001796g0030' => 'nta', 'Nitab4.5_0003348g0060' => 'nta', 'Nitab4.5_0003698g0040' => 'nta', 'Nitab4.5_0003942g0090' => 'nta', 'Nitab4.5_0004775g0070' => 'nta', 'Nitab4.5_0004864g0030' => 'nta', 'Nitab4.5_0005615g0020' => 'nta', 'Nitab4.5_0009288g0030' => 'nta', 'Nitab4.5_0009341g0010' => 'nta', 'Nitab4.5_0009535g0010' => 'nta', 'Nn1g03995' => 'nnu', 'Nn1g04100' => 'nnu', 'Nn1g06530' => 'nnu', 'Nn3g16404' => 'nnu', 'Nn3g17212' => 'nnu', 'Nn3g20776' => 'nnu', 'Nn3g21923' => 'nnu', 'Nn5g27737' => 'nnu', 'Nn5g29461' => 'nnu', 'Nn7g38355' => 'nnu', 'Nn8g39873' => 'nnu', 'Oeu000548.2' => 'oeu', 'Oeu004672.1' => 'oeu', 'Oeu015605.2' => 'oeu', 'Oeu016092.1' => 'oeu', 'Oeu017879.3' => 'oeu', 'Oeu024910.1' => 'oeu', 'Oeu028965.1' => 'oeu', 'Oeu031269.1' => 'oeu', 'Oeu031270.1' => 'oeu', 'Oeu032535.1' => 'oeu', 'Oeu034151.1' => 'oeu', 'Oeu034152.1' => 'oeu', 'Oeu034588.2' => 'oeu', 'Oeu050846.1' => 'oeu', 'Oeu050849.2' => 'oeu', 'Oeu051063.2' => 'oeu', 'Oeu052368.1' => 'oeu', 'Oeu052370.1' => 'oeu', 'Os01g0210400' => 'osa', 'Os01g0304300' => 'osa', 'Os01g0749100' => 'osa', 'Os02g0745800' => 'osa', 'Os03g0769050' => 'osa', 'Os05g0531500' => 'osa', 'Os06g0724300' => 'osa', 'Os11g0198100' => 'osa', 'Peaxi162Scf00069g01425' => 'pax', 'Peaxi162Scf00280g00811' => 'pax', 'Peaxi162Scf00310g00615' => 'pax', 'Peaxi162Scf00362g00542' => 'pax', 'Peaxi162Scf00461g00310' => 'pax', 'Peaxi162Scf00530g00118' => 'pax', 'Peaxi162Scf00541g00057' => 'pax', 'Peaxi162Scf00661g00017' => 'pax', 'Peaxi162Scf00926g00027' => 'pax', 'Peaxi162Scf01064g00263' => 'pax', 'Peaxi162Scf01211g00135' => 'pax', 'PGR004G2336' => 'pgr', 'PGR042G0327' => 'pgr', 'PGR042G1957' => 'pgr', 'PGR042G2003' => 'pgr', 'PGR042G3929' => 'pgr', 'PGR083G1137' => 'pgr', 'PGR083G1364' => 'pgr', 'PGSC0003DMG400003381' => 'stu', 'PGSC0003DMG400003417' => 'stu', 'PGSC0003DMG400008981' => 'stu', 'PGSC0003DMG400012417' => 'stu', 'PGSC0003DMG400012823' => 'stu', 'PGSC0003DMG400016885' => 'stu', 'PGSC0003DMG400022812' => 'stu', 'PGSC0003DMG400029726' => 'stu', 'PGSC0003DMG401009243' => 'stu', 'PGSC0003DMG401031505' => 'stu', 'PGSC0003DMG402031505' => 'stu', 'Phvul.001G017600' => 'pvu', 'Phvul.002G193500' => 'pvu', 'Phvul.002G228900' => 'pvu', 'Phvul.002G236800' => 'pvu', 'Phvul.003G049500' => 'pvu', 'Phvul.005G072000' => 'pvu', 'Phvul.006G164800' => 'pvu', 'Phvul.006G185100' => 'pvu', 'Phvul.007G090000' => 'pvu', 'Potri.001G399800' => 'ptr', 'Potri.002G149900' => 'ptr', 'Potri.004G044100' => 'ptr', 'Potri.004G177600' => 'ptr', 'Potri.009G138000' => 'ptr', 'Potri.010G094000' => 'ptr', 'Potri.011G053000' => 'ptr', 'Potri.011G119300' => 'ptr', 'Potri.013G113700' => 'ptr', 'Potri.018G107800' => 'ptr', 'Potri.019G084100' => 'ptr', 'Pp3c14_23720' => 'ppa', 'Pp3c16_6340' => 'ppa', 'Pp3c23_13420' => 'ppa', 'Pp3c24_2740' => 'ppa', 'Pp3c25_860' => 'ppa', 'Pp3c8_21750' => 'ppa', 'Prupe.1G273000' => 'ppe', 'Prupe.1G273700' => 'ppe', 'Prupe.1G274100' => 'ppe', 'Prupe.2G023300' => 'ppe', 'Prupe.4G048000' => 'ppe', 'Prupe.4G080400' => 'ppe', 'Prupe.4G181200' => 'ppe', 'Prupe.8G056900' => 'ppe', 'Prupe.8G168700' => 'ppe', 'Psat1g189080' => 'psa', 'Psat1g204760' => 'psa', 'Psat4g175560' => 'psa', 'Psat4g177720' => 'psa', 'Psat5g244240' => 'psa', 'Psat6g010720' => 'psa', 'Psat6g187200' => 'psa', 'Psat7g072040' => 'psa', 'PSO017G3501' => 'pso', 'PSO063G2148' => 'pso', 'PSO063G5608' => 'pso', 'PSO210G6392' => 'pso', 'PSO541G2319' => 'pso', 'PSO541G2836' => 'pso', 'PSO541G4012' => 'pso', 'PSO541G6253' => 'pso', 'PSO675G0580' => 'pso', 'PSO675G0856' => 'pso', 'PSO675G5635' => 'pso', 'PSO675G9157' => 'pso', 'PSO832G1660' => 'pso', 'PSO832G1969' => 'pso', 'QL02p007186' => 'qlo', 'QL02p033904' => 'qlo', 'QL03p064391' => 'qlo', 'QL05p040593' => 'qlo', 'QL05p058242' => 'qlo', 'QL08p021825' => 'qlo', 'QL11p004981' => 'qlo', 'RcHm_v2.0_Chr1g0318301' => 'rch', 'RcHm_v2.0_Chr4g0418501' => 'rch', 'RcHm_v2.0_Chr4g0439971' => 'rch', 'RcHm_v2.0_Chr5g0008541' => 'rch', 'RcHm_v2.0_Chr5g0014101' => 'rch', 'RcHm_v2.0_Chr5g0014131' => 'rch', 'RcHm_v2.0_Chr5g0033621' => 'rch', 'RcHm_v2.0_Chr6g0272041' => 'rch', 'RcHm_v2.0_Chr6g0278831' => 'rch', 'Rhsim02G0130400' => 'rsi', 'Rhsim02G0171100' => 'rsi', 'Rhsim05G0053000' => 'rsi', 'Rhsim05G0053100' => 'rsi', 'Rhsim06G0096500' => 'rsi', 'Rhsim06G0096600' => 'rsi', 'Rhsim06G0199100' => 'rsi', 'Rhsim12G0062300' => 'rsi', 'Rhsim12G0062800' => 'rsi', 'Sabra02G0118600' => 'sbr', 'Sabra04G0027300' => 'sbr', 'Sabra04G0119500' => 'sbr', 'Sabra08G0112500' => 'sbr', 'Sabra11G0036800' => 'sbr', 'Sabra11G0103800' => 'sbr', 'Sabra13G0096300' => 'sbr', 'Sabra16G0262300' => 'sbr', 'Sabra18G0091700' => 'sbr', 'Sabra19G0095400' => 'sbr', 'SalBow6G3080' => 'sbo', 'SalBow7G1157' => 'sbo', 'SalBow7G2123' => 'sbo', 'SalBow7G2285' => 'sbo', 'SalBow7G3537' => 'sbo', 'SalBow8G2947' => 'sbo', 'SalBow8G4463' => 'sbo', 'SalBow8G5466' => 'sbo', 'Sc01g0001750' => 'sci', 'Sc02g0006640' => 'sci', 'Sc02g0006670' => 'sci', 'Sc04g0008220' => 'sci', 'Sc05g0006190' => 'sci', 'Sc08g0002760' => 'sci', 'Sc17g0006170' => 'sci', 'Sc22g0002050' => 'sci', 'Sc23g0001190' => 'sci', 'Sc24g0000980' => 'sci', 'Sed0006245' => 'sed', 'Sed0007543' => 'sed', 'Sed0009411' => 'sed', 'Sed0010765' => 'sed', 'Sed0012944' => 'sed', 'Sed0014682' => 'sed', 'Sed0016174' => 'sed', 'Sed0016796' => 'sed', 'Sed0020317' => 'sed', 'Sed0021467' => 'sed', 'SEGI_01316' => 'sgi', 'SEGI_03374' => 'sgi', 'SEGI_16265' => 'sgi', 'SEGI_18569' => 'sgi', 'SEGI_20351' => 'sgi', 'SEGI_26395' => 'sgi', 'SEGI_29469' => 'sgi', 'SEGI_34771' => 'sgi', 'SEGI_36769' => 'sgi', 'SEGI_37139' => 'sgi', 'SGA_v2.0_scaffold100G29687' => 'sas', 'SGA_v2.0_scaffold118G32472' => 'sas', 'SGA_v2.0_scaffold14G07051' => 'sas', 'SGA_v2.0_scaffold183G39845' => 'sas', 'SGA_v2.0_scaffold1G00174' => 'sas', 'SGA_v2.0_scaffold22G09714' => 'sas', 'SGA_v2.0_scaffold333G48992' => 'sas', 'SGA_v2.0_scaffold46G17491' => 'sas', 'SGA_v2.0_scaffold49G18294' => 'sas', 'SGA_v2.0_scaffold63G21658' => 'sas', 'SHI01741' => 'shi', 'SHI05771' => 'shi', 'SHI18077' => 'shi', 'SHI20525' => 'shi', 'SHI20527' => 'shi', 'SHI20528' => 'shi', 'SMO172G0185' => 'smo', 'SMO198G0020' => 'smo', 'SMO351G0006' => 'smo', 'SMO356G0118' => 'smo', 'SMO358G0296' => 'smo', 'SMO367G0079' => 'smo', 'SMO367G1277' => 'smo', 'Solyc01g014220.3' => 'sly', 'Solyc01g111770.2' => 'sly', 'Solyc02g078180.3' => 'sly', 'Solyc03g006430.3' => 'sly', 'Solyc03g006456.1' => 'sly', 'Solyc03g079860.2' => 'sly', 'Solyc04g079770.3' => 'sly', 'Solyc05g007430.4' => 'sly', 'Solyc07g063150.3' => 'sly', 'Solyc08g016620.3' => 'sly', 'Solyc09g057590.3' => 'sly', 'Solyc09g057600.1' => 'sly', 'Solyc10g009050.3' => 'sly', 'Solyc11g017420.2' => 'sly', 'Sopen01g053810' => 'spe', 'Sopen02g023040' => 'spe', 'Sopen03g002440' => 'spe', 'Sopen04g033350' => 'spe', 'Sopen05g003310' => 'spe', 'Sopen07g004050' => 'spe', 'Sopen07g031340' => 'spe', 'Sopen08g006990' => 'spe', 'Sopen10g004830' => 'spe', 'Sopen11g009370' => 'spe', 'Sp1g24450' => 'spa', 'Sp1g29670' => 'spa', 'Sp1g39600' => 'spa', 'Sp2g11080' => 'spa', 'Sp2g13970' => 'spa', 'Sp4g16130' => 'spa', 'Sp6g13080' => 'spa', 'Sp7g37270' => 'spa', 'TAR371G0065' => 'tar', 'TAR376G0340' => 'tar', 'TAR376G0435' => 'tar', 'TAR381G0002' => 'tar', 'TAR381G1236' => 'tar', 'TAR624G0055' => 'tar', 'TAR624G0324' => 'tar', 'TAR624G0696' => 'tar', 'TAR624G0906' => 'tar', 'TAR625G0107' => 'tar', 'TAR626G0015' => 'tar', 'TAR626G1356' => 'tar', 'TAR627G0888' => 'tar', 'TAR628G0399' => 'tar', 'TAR628G1327' => 'tar', 'TAR629G2831' => 'tar', 'TAR629G2874' => 'tar', 'TAR633G1432' => 'tar', 'TAR633G2771' => 'tar', 'THA.LOC104803394' => 'tha', 'THA.LOC104805153' => 'tha', 'THA.LOC104806784' => 'tha', 'THA.LOC104810473' => 'tha', 'THA.LOC104813100' => 'tha', 'THA.LOC104814215' => 'tha', 'THA.LOC104815554' => 'tha', 'THA.LOC104820544' => 'tha', 'THA.LOC104824754' => 'tha', 'THA.LOC104827717' => 'tha', 'Thecc.02G031400' => 'tca', 'Thecc.02G055900' => 'tca', 'Thecc.02G350800' => 'tca', 'Thecc.06G150900' => 'tca', 'Thecc.06G186600' => 'tca', 'Thecc.07G089600' => 'tca', 'Thecc.08G020400' => 'tca', 'Thecc.08G182100' => 'tca', 'Thhalv10000873m.g' => 'esa', 'Thhalv10004185m.g' => 'esa', 'Thhalv10006981m.g' => 'esa', 'Thhalv10007204m.g' => 'esa', 'Thhalv10011374m.g' => 'esa', 'Thhalv10013482m.g' => 'esa', 'Thhalv10017801m.g' => 'esa', 'Thhalv10024983m.g' => 'esa', 'TPR.G12072' => 'tpr', 'TPR.G15769' => 'tpr', 'TPR.G16504' => 'tpr', 'TPR.G16506' => 'tpr', 'TPR.G24345' => 'tpr', 'TPR.G26666' => 'tpr', 'TPR.G27320' => 'tpr', 'TPR.G31819' => 'tpr', 'TPR.G38879' => 'tpr', 'TPR.G39015' => 'tpr', 'TPR.G8819' => 'tpr', 'TWI09G0924' => 'twi', 'TWI12G0811' => 'twi', 'TWI12G1294' => 'twi', 'TWI31G0150' => 'twi', 'TWI36G1262' => 'twi', 'TWI38G1287' => 'twi', 'TWI38G1633' => 'twi', 'TWI38G1982' => 'twi', 'TWI39G0116' => 'twi', 'TWI60G1011' => 'twi', 'TWI63G0171' => 'twi', 'TWI73G0839' => 'twi', 'TWI79G1511' => 'twi', 'unitig_0.g915' => 'ugi', 'unitig_0.g916' => 'ugi', 'unitig_21.g20219' => 'ugi', 'unitig_21.g20416' => 'ugi', 'unitig_578.g16132' => 'ugi', 'unitig_578.g16718' => 'ugi', 'unitig_62.g23481' => 'ugi', 'unitig_744.g24535' => 'ugi', 'unitig_749.g13525' => 'ugi', 'vmacro01248' => 'vma', 'vmacro02290' => 'vma', 'vmacro10946' => 'vma', 'vmacro11865' => 'vma', 'vmacro12493' => 'vma', 'vmacro17322' => 'vma', 'vmacro21599' => 'vma', 'vmacro23041' => 'vma', 'VMungo0251G0004' => 'vmu', 'VMungo0251G2639' => 'vmu', 'VMungo0251G2967' => 'vmu', 'VMungo0540G0864' => 'vmu', 'VMungo0540G1569' => 'vmu', 'VMungo0647G0317' => 'vmu', 'VMungo0720G1373' => 'vmu', 'VMungo0720G1508' => 'vmu', 'VMungo1080G0485' => 'vmu', 'VMungo1215G3177' => 'vmu', 'Zm00001eb112600' => 'zma', 'Zm00001eb120220' => 'zma', 'Zm00001eb153240' => 'zma', 'Zm00001eb168880' => 'zma', 'Zm00001eb213920' => 'zma', 'Zm00001eb228280' => 'zma', 'Zm00001eb254580' => 'zma', 'Zm00001eb272180' => 'zma', 'Zm00001eb293190' => 'zma', 'Zm00001eb322930' => 'zma', 'Zm00001eb353360' => 'zma', 'Zm00001eb353390' => 'zma', 'Zm00001eb353430' => 'zma', 'Zm00001eb353440' => 'zma', 'Zm00001eb353780' => 'zma' ) $gf_id = 'HOM05D000499' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000499' ) $data_identifier = 'HOM05D000499' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 29, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 12, 'amhyb' => (int) 8, 'aly' => (int) 12, 'aox' => (int) 9, 'arhy' => (int) 26, 'ath' => (int) 8, 'atr' => (int) 7, 'acertr' => (int) 10, 'cqu' => (int) 15, 'bca' => (int) 29, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 11, 'cansat' => (int) 8, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 9, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 8, 'cpa' => (int) 10, 'csa' => (int) 7, 'camsi' => (int) 20, 'dca' => (int) 8, 'din' => (int) 12, 'dzi' => (int) 14, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 6, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 38, 'gra' => (int) 16, 'vvi' => (int) 8, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 5, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 11, 'lja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 11, 'mpo' => (int) 3, 'mbi' => (int) 14, 'mdo' => (int) 14, 'mtr' => (int) 8, 'cme' => (int) 9, 'egut' => (int) 9, 'ama' => (int) 11, 'nta' => (int) 17, 'nnu' => (int) 11, 'oeu' => (int) 18, 'osa' => (int) 8, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 6, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 9, 'rsi' => (int) 9, 'sbr' => (int) 10, 'sbo' => (int) 8, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 10, 'sas' => (int) 10, 'shi' => (int) 6, 'smo' => (int) 7, 'sly' => (int) 14, 'spe' => (int) 10, 'spa' => (int) 8, 'tar' => (int) 19, 'tha' => (int) 10, 'tca' => (int) 8, 'esa' => (int) 8, 'tpr' => (int) 11, 'twi' => (int) 13, 'ugi' => (int) 9, 'vma' => (int) 8, 'vmu' => (int) 10, 'zma' => (int) 15 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb353780' $species_info = array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ) $local_species = 'aly' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000499', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1066', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p29780' => 'bna', 'A02p33180' => 'bna', 'A03p16470' => 'bna', 'A03p66010' => 'bna', 'A04p25970' => 'bna', 'A06p01270' => 'bna', 'A06p46080' => 'bna', 'A07p11400' => 'bna', 'A08p01840' => 'bna', 'A08p08230' => 'bna', 'A08p25740' => 'bna', 'A09p32070' => 'bna', 'A09p37830' => 'bna', 'A09p42840' => 'bna', 'A09p42850' => 'bna', 'Aa31LG10G2060' => 'aar', 'Aa31LG2G7410' => 'aar', 'Aa31LG6G10200' => 'aar', 'Aa31LG6G16680' => 'aar', 'Aa31LG6G8470' => 'aar', 'Aa31LG9G12730' => 'aar', 'Aa31LG9G13680' => 'aar', 'Aa31LG9G14920' => 'aar', 'Aa31LG9G6650' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4977' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5467' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3254' => 'aag', 'Actinidia02578' => 'ach', 'Actinidia07693' => 'ach', 'Actinidia08413' => 'ach', 'Actinidia08414' => 'ach', 'Actinidia15289' => 'ach', 'Actinidia19871' => 'ach', 'Actinidia21475' => 'ach', 'Actinidia22576' => 'ach', 'Actinidia28327' => 'ach', 'Actinidia32491' => 'ach', 'Actinidia39463' => 'ach', 'Actinidia39571' => 'ach', 'Ah.01g013750' => 'amhyb', 'Ah.01g023210' => 'amhyb', 'Ah.04g164850' => 'amhyb', 'Ah.05g178060' => 'amhyb', 'Ah.07g204270' => 'amhyb', 'Ah.07g208480' => 'amhyb', 'Ah.09g237410' => 'amhyb', 'Ah.14g089460' => 'amhyb', 'AL1G41790' => 'aly', 'AL1G49050' => 'aly', 'AL1G53810' => 'aly', 'AL1G61400' => 'aly', 'AL4G18580' => 'aly', 'AL5G12510' => 'aly', 'AL5G12540' => 'aly', 'AL6G43230' => 'aly', 'AL7G10370' => 'aly', 'AL7G19250' => 'aly', 'AL8G12240' => 'aly', 'AL8G18540' => 'aly', 'Aqoxy1G02409' => 'aox', 'Aqoxy2G03993' => 'aox', 'Aqoxy3G03357' => 'aox', 'Aqoxy4G00785' => 'aox', 'Aqoxy5G02598' => 'aox', 'Aqoxy6G00132' => 'aox', 'Aqoxy7G01776' => 'aox', 'Aqoxy7G02316' => 'aox', 'Aqoxy7G03973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.12AFKW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B8730' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27IQR1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3F75VG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3RE0GA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41TCQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.527VTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FIR39' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5W8UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DA38EV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ63HS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H1I32C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HC27T5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4M8AP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7N3CZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9UVDZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LS1NQA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT1D4B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SKC4TM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCFV76' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF9Q1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQWD9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1ZM88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WE07RT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YCK7VH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJE6Q6' => 'arhy', 'AT1G28240' => 'ath', 'AT1G34550' => 'ath', 'AT1G53040' => 'ath', 'AT2G02910' => 'ath', 'AT4G09630' => 'ath', 'AT4G38500' => 'ath', 'AT5G42660' => 'ath', 'AT5G46220' => 'ath', 'ATR0152G026' => 'atr', 'ATR0564G343' => 'atr', 'ATR0706G151' => 'atr', 'ATR0733G207' => 'atr', 'ATR0751G234' => 'atr', 'ATR0807G048' => 'atr', 'ATR1091G084' => 'atr', 'Atru.chr10.1229' => 'acertr', 'Atru.chr10.1230' => 'acertr', 'Atru.chr10.1874' => 'acertr', 'Atru.chr11.1808' => 'acertr', 'Atru.chr13.1795' => 'acertr', 'Atru.chr13.570' => 'acertr', 'Atru.chr2.2608' => 'acertr', 'Atru.chr2.2609' => 'acertr', 'Atru.chr5.3428' => 'acertr', 'Atru.chr8.1171' => 'acertr', 'AUR62004651' => 'cqu', 'AUR62008675' => 'cqu', 'AUR62010014' => 'cqu', 'AUR62013004' => 'cqu', 'AUR62014825' => 'cqu', 'AUR62015015' => 'cqu', 'AUR62015151' => 'cqu', 'AUR62017020' => 'cqu', 'AUR62019422' => 'cqu', 'AUR62023570' => 'cqu', 'AUR62025571' => 'cqu', 'AUR62029098' => 'cqu', 'AUR62033863' => 'cqu', 'AUR62034296' => 'cqu', 'AUR62040075' => 'cqu', 'BcaB02g07334' => 'bca', 'BcaB02g10575' => 'bca', 'BcaB03g12119' => 'bca', 'BcaB03g12120' => 'bca', 'BcaB03g13945' => 'bca', 'BcaB04g17123' => 'bca', 'BcaB04g17867' => 'bca', 'BcaB04g19839' => 'bca', 'BcaB07g30317' => 'bca', 'BcaB07g32432' => 'bca', 'BcaB07g33362' => 'bca', 'BcaB08g36611' => 'bca', 'BcaC01g00028' => 'bca', 'BcaC01g01356' => 'bca', 'BcaC01g02034' => 'bca', 'BcaC01g06051' => 'bca', 'BcaC03g16839' => 'bca', 'BcaC03g17176' => 'bca', 'BcaC05g26829' => 'bca', 'BcaC06g31490' => 'bca', 'BcaC06g35344' => 'bca', 'BcaC06g36570' => 'bca', 'BcaC07g37537' => 'bca', 'BcaC08g43491' => 'bca', 'BcaC08g43773' => 'bca', 'BcaNung00234' => 'bca', 'BcaNung01982' => 'bca', 'BcaNung03707' => 'bca', 'BcaNung06454' => 'bca', 'BolC2t10762H' => 'bol', 'BolC2t11191H' => 'bol', 'BolC3t14322H' => 'bol', 'BolC3t19747H' => 'bol', 'BolC3t21425H' => 'bol', 'BolC4t27800H' => 'bol', 'BolC5t31423H' => 'bol', 'BolC6t35951H' => 'bol', 'BolC6t36282H' => 'bol', 'BolC7t40678H' => 'bol', 'BolC7t40679H' => 'bol', 'BolC7t42222H' => 'bol', 'BolC7t43492H' => 'bol', 'BolC7t46785H' => 'bol', 'BolC8t47853H' => 'bol', 'BolC9t56805H' => 'bol', 'BraA02t08000Z' => 'bra', 'BraA02t08341Z' => 'bra', 'BraA03t10936Z' => 'bra', 'BraA03t15657Z' => 'bra', 'BraA04t18100Z' => 'bra', 'BraA05t20523Z' => 'bra', 'BraA06t23353Z' => 'bra', 'BraA06t27473Z' => 'bra', 'BraA06t27769Z' => 'bra', 'BraA07t28928Z' => 'bra', 'BraA08t32236Z' => 'bra', 'BraA08t32841Z' => 'bra', 'BraA08t34524Z' => 'bra', 'BraA09t38742Z' => 'bra', 'BraA09t39295Z' => 'bra', 'C02p47180' => 'bna', 'C02p50990' => 'bna', 'C03p19360' => 'bna', 'C03p74950' => 'bna', 'C03p91000' => 'bna', 'C04p63260' => 'bna', 'C05p27050' => 'bna', 'C06p08750' => 'bna', 'C06p11490' => 'bna', 'C07p02820' => 'bna', 'C07p17180' => 'bna', 'C07p29440' => 'bna', 'C07p63730' => 'bna', 'C09p39260' => 'bna', 'CAN.G1164.34' => 'can', 'CAN.G1164.39' => 'can', 'CAN.G1530.3' => 'can', 'CAN.G162.61' => 'can', 'CAN.G176.6' => 'can', 'CAN.G289.49' => 'can', 'CAN.G370.21' => 'can', 'CAN.G370.22' => 'can', 'CAN.G371.117' => 'can', 'CAN.G58.37' => 'can', 'CAN.G588.98' => 'can', 'CANSAT21G2266' => 'cansat', 'CANSAT25G2799' => 'cansat', 'CANSAT35G0862' => 'cansat', 'CANSAT35G1704' => 'cansat', 'CANSAT35G1760' => 'cansat', 'CANSAT56G3971' => 'cansat', 'CANSAT56G4116' => 'cansat', 'CANSAT80G1259' => 'cansat', 'CARHR027730' => 'chi', 'CARHR033880' => 'chi', 'CARHR043270' => 'chi', 'CARHR145330' => 'chi', 'CARHR145340' => 'chi', 'CARHR175570' => 'chi', 'CARHR181570' => 'chi', 'CARHR258470' => 'chi', 'CARHR260490' => 'chi', 'CARHR294220' => 'chi', 'Carub.0001s2668' => 'cru', 'Carub.0001s3257' => 'cru', 'Carub.0001s4220' => 'cru', 'Carub.0005s0179' => 'cru', 'Carub.0006s2807' => 'cru', 'Carub.0007s0039' => 'cru', 'Carub.0008s0169' => 'cru', 'Carub.0008s0636' => 'cru', 'Ca_00338_v3' => 'car', 'Ca_00542_v3' => 'car', 'Ca_01844_v3' => 'car', 'Ca_10611_v3' => 'car', 'Ca_13326_v3' => 'car', 'Ca_17944_v3' => 'car', 'Ca_18546_v3' => 'car', 'Ca_24219_v3' => 'car', 'Ca_29972_v3' => 'car', 'CBR_g3681' => 'cbr', 'CBR_g40021' => 'cbr', 'Cc01_g08140' => 'ccan', 'Cc02_g13410' => 'ccan', 'Cc02_g37480' => 'ccan', 'Cc05_g12030' => 'ccan', 'Cc09_g03370' => 'ccan', 'Cc09_g10300' => 'ccan', 'Cc10_g03530' => 'ccan', 'Cc10_g11380' => 'ccan', 'CDE01G0176' => 'cde', 'CDE02G0675' => 'cde', 'CDE02G0942' => 'cde', 'CDE02G1153' => 'cde', 'CDE02G4177' => 'cde', 'CDE04G2117' => 'cde', 'CDE04G2736' => 'cde', 'CDE08G1161' => 'cde', 'CDE09G1238' => 'cde', 'Cfa000467' => 'cfa', 'Cfa000947' => 'cfa', 'Cfa004969' => 'cfa', 'Cfa005284' => 'cfa', 'Cfa008993' => 'cfa', 'Cfa018187' => 'cfa', 'Cfa018454' => 'cfa', 'Cfa020585' => 'cfa', 'Ciclev10000424m.g' => 'ccl', 'Ciclev10003605m.g' => 'ccl', 'Ciclev10007828m.g' => 'ccl', 'Ciclev10014620m.g' => 'ccl', 'Ciclev10015169m.g' => 'ccl', 'Ciclev10018291m.g' => 'ccl', 'Ciclev10028256m.g' => 'ccl', 'Ciclev10033822m.g' => 'ccl', 'CiPaw.05G060300' => 'cil', 'CiPaw.05G085000' => 'cil', 'CiPaw.06G083700' => 'cil', 'CiPaw.06G120300' => 'cil', 'CiPaw.09G060500' => 'cil', 'CiPaw.09G123800' => 'cil', 'CiPaw.11G169700' => 'cil', 'CiPaw.12G118300' => 'cil', 'CiPaw.15G071000' => 'cil', 'CiPaw.15G081900' => 'cil', 'ClCG01G024610' => 'cla', 'ClCG03G006070' => 'cla', 'ClCG05G019250' => 'cla', 'ClCG09G009500' => 'cla', 'ClCG11G008200' => 'cla', 'ClCG11G018080' => 'cla', 'COL.COLO4_17373' => 'col', 'COL.COLO4_22994' => 'col', 'COL.COLO4_26389' => 'col', 'COL.COLO4_27170' => 'col', 'COL.COLO4_31074' => 'col', 'COL.COLO4_31465' => 'col', 'COL.COLO4_36438' => 'col', 'COL.COLO4_36439' => 'col', 'Cpa.g.c38781' => 'cpa', 'Cpa.g.sc128.12' => 'cpa', 'Cpa.g.sc166.7' => 'cpa', 'Cpa.g.sc166.8' => 'cpa', 'Cpa.g.sc20.111' => 'cpa', 'Cpa.g.sc27.31' => 'cpa', 'Cpa.g.sc64.36' => 'cpa', 'Cpa.g.sc64.37' => 'cpa', 'Cpa.g.sc66.49' => 'cpa', 'Cpa.g.sc80.64' => 'cpa', 'CsaV3_1G012320' => 'csa', 'CsaV3_2G008480' => 'csa', 'CsaV3_2G033450' => 'csa', 'CsaV3_3G044830' => 'csa', 'CsaV3_4G033710' => 'csa', 'CsaV3_6G051730' => 'csa', 'CsaV3_7G025350' => 'csa', 'CSS0001067' => 'camsi', 'CSS0005996' => 'camsi', 'CSS0006590' => 'camsi', 'CSS0009673' => 'camsi', 'CSS0010201' => 'camsi', 'CSS0010549' => 'camsi', 'CSS0011364' => 'camsi', 'CSS0014473' => 'camsi', 'CSS0014961' => 'camsi', 'CSS0020191' => 'camsi', 'CSS0021165' => 'camsi', 'CSS0022306' => 'camsi', 'CSS0030591' => 'camsi', 'CSS0030696' => 'camsi', 'CSS0032653' => 'camsi', 'CSS0037487' => 'camsi', 'CSS0041102' => 'camsi', 'CSS0041261' => 'camsi', 'CSS0046246' => 'camsi', 'CSS0049256' => 'camsi', 'DCAR_004075' => 'dca', 'DCAR_011538' => 'dca', 'DCAR_019553' => 'dca', 'DCAR_020952' => 'dca', 'DCAR_021739' => 'dca', 'DCAR_027407' => 'dca', 'DCAR_027913' => 'dca', 'DCAR_028066' => 'dca', 'Dinv05899' => 'din', 'Dinv07563' => 'din', 'Dinv08010' => 'din', 'Dinv14125' => 'din', 'Dinv20172' => 'din', 'Dinv30743' => 'din', 'Dinv31229' => 'din', 'Dinv34162' => 'din', 'Dinv36028' => 'din', 'Dinv39368' => 'din', 'Dinv40565' => 'din', 'Dinv41706' => 'din', 'Duzib052G0089' => 'dzi', 'Duzib116G0641' => 'dzi', 'Duzib132G0069' => 'dzi', 'Duzib132G1219' => 'dzi', 'Duzib147G0278' => 'dzi', 'Duzib160G0480' => 'dzi', 'Duzib170G0661' => 'dzi', 'Duzib177G0591' => 'dzi', 'Duzib187G1353' => 'dzi', 'Duzib192G0858' => 'dzi', 'Duzib192G0883' => 'dzi', 'Duzib213G0506' => 'dzi', 'Duzib235G0289' => 'dzi', 'Duzib251G0422' => 'dzi', 'ECA232G3898' => 'eca', 'ECA233G5950' => 'eca', 'ECA234G1699' => 'eca', 'ECA234G2421' => 'eca', 'ECA236G0426' => 'eca', 'ECA236G4331' => 'eca', 'ECA248G2573' => 'eca', 'EL10Ac1g00077' => 'bvu', 'EL10Ac1g01746' => 'bvu', 'EL10Ac2g03464' => 'bvu', 'EL10Ac4g08176' => 'bvu', 'EL10Ac7g17521' => 'bvu', 'EL10Ac8g20386' => 'bvu', 'EL10Ac9g21343' => 'bvu', 'EL10Ac9g22688' => 'bvu', 'Eucgr.B03434' => 'egr', 'Eucgr.D00618' => 'egr', 'Eucgr.E02395' => 'egr', 'Eucgr.F01129' => 'egr', 'Eucgr.F02622' => 'egr', 'Eucgr.F04207' => 'egr', 'FAN01G0570' => 'fan', 'FAN03G3351' => 'fan', 'FAN06G3702' => 'fan', 'FAN07G2149' => 'fan', 'FAN10G3758' => 'fan', 'FAN11G1170' => 'fan', 'FAN11G2050' => 'fan', 'FAN11G2724' => 'fan', 'FAN12G1700' => 'fan', 'FAN12G2028' => 'fan', 'FAN15G1160' => 'fan', 'FAN15G3063' => 'fan', 'FAN16G2540' => 'fan', 'FAN16G3077' => 'fan', 'FAN16G3624' => 'fan', 'FAN17G0221' => 'fan', 'FAN20G2492' => 'fan', 'FAN20G2905' => 'fan', 'FAN21G0548' => 'fan', 'FAN21G1300' => 'fan', 'FAN22G0077' => 'fan', 'FAN22G1315' => 'fan', 'FAN24G1280' => 'fan', 'FAN24G1445' => 'fan', 'FAN24G3527' => 'fan', 'FAN25G0464' => 'fan', 'FAN25G2885' => 'fan', 'FAN25G3270' => 'fan', 'FAN27G1101' => 'fan', 'FAN27G2846' => 'fan', 'FAN27G3524' => 'fan', 'FvH4_2g11770' => 'fve', 'FvH4_2g15630' => 'fve', 'FvH4_3g05570' => 'fve', 'FvH4_3g09110' => 'fve', 'FvH4_3g19940' => 'fve', 'FvH4_4g04821' => 'fve', 'FvH4_4g31480' => 'fve', 'FvH4_7g01740' => 'fve', 'Glyma.05G130400' => 'gma', 'Glyma.05G156400' => 'gma', 'Glyma.07G197000' => 'gma', 'Glyma.08G085151' => 'gma', 'Glyma.08G114500' => 'gma', 'Glyma.08G300400' => 'gma', 'Glyma.10G215800' => 'gma', 'Glyma.12G224400' => 'gma', 'Glyma.13G179300' => 'gma', 'Glyma.13G218151' => 'gma', 'Glyma.13G238800' => 'gma', 'Glyma.13G276900' => 'gma', 'Glyma.14G078200' => 'gma', 'Glyma.15G074500' => 'gma', 'Glyma.15G094100' => 'gma', 'Glyma.17G247200' => 'gma', 'Glyma.18G120100' => 'gma', 'Glyma.20G176000' => 'gma', 'Gohir.A01G063600' => 'ghi', 'Gohir.A01G170301' => 'ghi', 'Gohir.A02G060500' => 'ghi', 'Gohir.A05G133850' => 'ghi', 'Gohir.A05G161400' => 'ghi', 'Gohir.A06G012900' => 'ghi', 'Gohir.A06G035901' => 'ghi', 'Gohir.A06G127100' => 'ghi', 'Gohir.A06G210500' => 'ghi', 'Gohir.A08G008650' => 'ghi', 'Gohir.A09G072700' => 'ghi', 'Gohir.A09G088301' => 'ghi', 'Gohir.A10G040600' => 'ghi', 'Gohir.A12G036300' => 'ghi', 'Gohir.A12G143350' => 'ghi', 'Gohir.A12G165500' => 'ghi', 'Gohir.A13G145700' => 'ghi', 'Gohir.D01G050000' => 'ghi', 'Gohir.D01G051366' => 'ghi', 'Gohir.D01G161350' => 'ghi', 'Gohir.D02G065900' => 'ghi', 'Gohir.D05G164200' => 'ghi', 'Gohir.D05G355500' => 'ghi', 'Gohir.D06G010400' => 'ghi', 'Gohir.D06G111250' => 'ghi', 'Gohir.D06G132000' => 'ghi', 'Gohir.D06G210500' => 'ghi', 'Gohir.D07G165675' => 'ghi', 'Gohir.D08G062240' => 'ghi', 'Gohir.D08G086101' => 'ghi', 'Gohir.D08G138060' => 'ghi', 'Gohir.D09G072300' => 'ghi', 'Gohir.D10G041400' => 'ghi', 'Gohir.D11G191020' => 'ghi', 'Gohir.D11G212066' => 'ghi', 'Gohir.D12G036300' => 'ghi', 'Gohir.D12G168600' => 'ghi', 'Gohir.D13G150600' => 'ghi', 'Gorai.001G057300' => 'gra', 'Gorai.002G069900' => 'gra', 'Gorai.002G200000' => 'gra', 'Gorai.003G067600' => 'gra', 'Gorai.005G074800' => 'gra', 'Gorai.006G087300' => 'gra', 'Gorai.008G037500' => 'gra', 'Gorai.008G181400' => 'gra', 'Gorai.009G169400' => 'gra', 'Gorai.009G387900' => 'gra', 'Gorai.010G013300' => 'gra', 'Gorai.010G153800' => 'gra', 'Gorai.010G255800' => 'gra', 'Gorai.011G043700' => 'gra', 'Gorai.011G198900' => 'gra', 'Gorai.013G168400' => 'gra', 'GSVIVG01005212001' => 'vvi', 'GSVIVG01006163001' => 'vvi', 'GSVIVG01009625001' => 'vvi', 'GSVIVG01014338001' => 'vvi', 'GSVIVG01020005001' => 'vvi', 'GSVIVG01021450001' => 'vvi', 'GSVIVG01023975001' => 'vvi', 'GSVIVG01034490001' => 'vvi', 'HanXRQChr04g0112071' => 'han', 'HanXRQChr05g0131151' => 'han', 'HanXRQChr09g0262371' => 'han', 'HanXRQChr09g0268401' => 'han', 'HanXRQChr10g0279241' => 'han', 'HanXRQChr10g0297961' => 'han', 'HanXRQChr11g0326231' => 'han', 'HanXRQChr11g0328471' => 'han', 'HanXRQChr16g0507941' => 'han', 'HanXRQChr17g0560211' => 'han', 'Haze_02108' => 'cav', 'Haze_02428' => 'cav', 'Haze_05593' => 'cav', 'Haze_06448' => 'cav', 'Haze_09427' => 'cav', 'Haze_12022' => 'cav', 'Haze_17612' => 'cav', 'Haze_17928' => 'cav', 'Hma1.2p1_0032F.1_g019250' => 'hma', 'Hma1.2p1_0163F.1_g072690' => 'hma', 'Hma1.2p1_0265F.1_g106710' => 'hma', 'Hma1.2p1_0286F.1_g113970' => 'hma', 'Hma1.2p1_0363F.1_g136640' => 'hma', 'Hma1.2p1_0584F.1_g183470' => 'hma', 'Hma1.2p1_0885F.1_g232570' => 'hma', 'HPP92_006022' => 'vpl', 'HPP92_007320' => 'vpl', 'HPP92_011521' => 'vpl', 'HPP92_019387' => 'vpl', 'HPP92_024038' => 'vpl', 'Hund05891' => 'sun', 'Hund06450' => 'sun', 'Hund12053' => 'sun', 'Hund16800' => 'sun', 'Hund21222' => 'sun', 'Hund22896' => 'sun', 'Hund23746' => 'sun', 'Hund27083' => 'sun', 'Lalb_Chr02g0141831' => 'lal', 'Lalb_Chr02g0141841' => 'lal', 'Lalb_Chr05g0220411' => 'lal', 'Lalb_Chr06g0162081' => 'lal', 'Lalb_Chr09g0327651' => 'lal', 'Lalb_Chr13g0295051' => 'lal', 'Lalb_Chr15g0086801' => 'lal', 'Lalb_Chr16g0383781' => 'lal', 'Lalb_Chr16g0383791' => 'lal', 'Lalb_Chr18g0055441' => 'lal', 'Lalb_Chr18g0059611' => 'lal', 'Lalb_Chr20g0109661' => 'lal', 'Lalb_Chr20g0109831' => 'lal', 'Lalb_Chr20g0121871' => 'lal', 'Lalb_Chr22g0355361' => 'lal', 'Lalb_Chr25g0286371' => 'lal', 'Lj1A1187G43' => 'lonja', 'Lj1A1205T50' => 'lonja', 'Lj1A800G33' => 'lonja', 'Lj1C1187T7' => 'lonja', 'Lj1C843T11' => 'lonja', 'Lj1g0010940' => 'lja', 'Lj2A288T69' => 'lonja', 'Lj3g0024276' => 'lja', 'Lj4A47T76' => 'lonja', 'Lj4g0005805' => 'lja', 'Lj4g0006097' => 'lja', 'Lj4g0008528' => 'lja', 'Lj4g0024907' => 'lja', 'Lj5g0012472' => 'lja', 'Lj5g0018648' => 'lja', 'Lj6C789G1' => 'lonja', 'Lj6g0004000' => 'lja', 'Lj7A292G67' => 'lonja', 'Lj7A292T64' => 'lonja', 'Lj9A400T58' => 'lonja', 'Lsat_1_v5_gn_1_126181' => 'lsa', 'Lsat_1_v5_gn_4_123041' => 'lsa', 'Lsat_1_v5_gn_4_133620' => 'lsa', 'Lsat_1_v5_gn_4_53221' => 'lsa', 'Lsat_1_v5_gn_4_71961' => 'lsa', 'Lsat_1_v5_gn_7_105241' => 'lsa', 'Lsat_1_v5_gn_7_21361' => 'lsa', 'Lsat_1_v5_gn_7_28860' => 'lsa', 'Lsat_1_v5_gn_7_31260' => 'lsa', 'Lsat_1_v5_gn_8_52801' => 'lsa', 'Manes.02G191400' => 'mes', 'Manes.03G110100' => 'mes', 'Manes.04G071100' => 'mes', 'Manes.05G100500' => 'mes', 'Manes.05G164700' => 'mes', 'Manes.15G087000' => 'mes', 'Manes.15G121500' => 'mes', 'Manes.16G028300' => 'mes', 'Manes.17G046100' => 'mes', 'Manes.17G069800' => 'mes', 'Manes.18G100500' => 'mes', 'Mapoly0002s0109' => 'mpo', 'Mapoly0024s0007' => 'mpo', 'Mapoly0089s0032' => 'mpo', 'MBI04_g42241_MAGBIO' => 'mbi', 'MBI05_g11988_MAGBIO' => 'mbi', 'MBI05_g35452_MAGBIO' => 'mbi', 'MBI07_g30179_MAGBIO' => 'mbi', 'MBI07_g35859_MAGBIO' => 'mbi', 'MBI07_g35860_MAGBIO' => 'mbi', 'MBI07_g37166_MAGBIO' => 'mbi', 'MBI08_g18172_MAGBIO' => 'mbi', 'MBI09_g08441_MAGBIO' => 'mbi', 'MBI13_g01676_MAGBIO' => 'mbi', 'MBI14_g42955_MAGBIO' => 'mbi', 'MBI16_g13161_MAGBIO' => 'mbi', 'MBI17_g27204_MAGBIO' => 'mbi', 'MBI19_g21595_MAGBIO' => 'mbi', 'MD00G1148400' => 'mdo', 'MD02G1301200' => 'mdo', 'MD03G1227800' => 'mdo', 'MD05G1041100' => 'mdo', 'MD05G1124800' => 'mdo', 'MD05G1284000' => 'mdo', 'MD05G1338800' => 'mdo', 'MD05G1338900' => 'mdo', 'MD07G1022800' => 'mdo', 'MD10G1047500' => 'mdo', 'MD10G1127500' => 'mdo', 'MD10G1262300' => 'mdo', 'MD10G1293800' => 'mdo', 'MD16G1074300' => 'mdo', 'Medtr1g021670' => 'mtr', 'Medtr1g096320' => 'mtr', 'Medtr2g013690' => 'mtr', 'Medtr2g019450' => 'mtr', 'Medtr2g085170' => 'mtr', 'Medtr4g088785' => 'mtr', 'Medtr8g055930' => 'mtr', 'Medtr8g085850' => 'mtr', 'MELO3C002605.2' => 'cme', 'MELO3C003891.2' => 'cme', 'MELO3C004012.2' => 'cme', 'MELO3C007134.2' => 'cme', 'MELO3C008118.2' => 'cme', 'MELO3C016700.2' => 'cme', 'MELO3C024127.2' => 'cme', 'MELO3C033361.2' => 'cme', 'MELO3C033362.2' => 'cme', 'Migut.C00430' => 'egut', 'Migut.C01246' => 'egut', 'Migut.E00101' => 'egut', 'Migut.H01486' => 'egut', 'Migut.H01939' => 'egut', 'Migut.K00360' => 'egut', 'Migut.M00910' => 'egut', 'Migut.M01139' => 'egut', 'Migut.N02677' => 'egut', 'MSTRG.13252' => 'ama', 'MSTRG.14701' => 'ama', 'MSTRG.1521' => 'ama', 'MSTRG.15884' => 'ama', 'MSTRG.16242' => 'ama', 'MSTRG.22285' => 'ama', 'MSTRG.22444' => 'ama', 'MSTRG.2349' => 'ama', 'MSTRG.26308' => 'ama', 'MSTRG.28296' => 'ama', 'MSTRG.9895' => 'ama', 'Nitab4.5_0000110g0060' => 'nta', 'Nitab4.5_0000420g0130' => 'nta', 'Nitab4.5_0000422g0030' => 'nta', 'Nitab4.5_0000560g0180' => 'nta', 'Nitab4.5_0000703g0100' => 'nta', 'Nitab4.5_0000786g0200' => 'nta', 'Nitab4.5_0001336g0020' => 'nta', 'Nitab4.5_0001796g0030' => 'nta', 'Nitab4.5_0003348g0060' => 'nta', 'Nitab4.5_0003698g0040' => 'nta', 'Nitab4.5_0003942g0090' => 'nta', 'Nitab4.5_0004775g0070' => 'nta', 'Nitab4.5_0004864g0030' => 'nta', 'Nitab4.5_0005615g0020' => 'nta', 'Nitab4.5_0009288g0030' => 'nta', 'Nitab4.5_0009341g0010' => 'nta', 'Nitab4.5_0009535g0010' => 'nta', 'Nn1g03995' => 'nnu', 'Nn1g04100' => 'nnu', 'Nn1g06530' => 'nnu', 'Nn3g16404' => 'nnu', 'Nn3g17212' => 'nnu', 'Nn3g20776' => 'nnu', 'Nn3g21923' => 'nnu', 'Nn5g27737' => 'nnu', 'Nn5g29461' => 'nnu', 'Nn7g38355' => 'nnu', 'Nn8g39873' => 'nnu', 'Oeu000548.2' => 'oeu', 'Oeu004672.1' => 'oeu', 'Oeu015605.2' => 'oeu', 'Oeu016092.1' => 'oeu', 'Oeu017879.3' => 'oeu', 'Oeu024910.1' => 'oeu', 'Oeu028965.1' => 'oeu', 'Oeu031269.1' => 'oeu', 'Oeu031270.1' => 'oeu', 'Oeu032535.1' => 'oeu', 'Oeu034151.1' => 'oeu', 'Oeu034152.1' => 'oeu', 'Oeu034588.2' => 'oeu', 'Oeu050846.1' => 'oeu', 'Oeu050849.2' => 'oeu', 'Oeu051063.2' => 'oeu', 'Oeu052368.1' => 'oeu', 'Oeu052370.1' => 'oeu', 'Os01g0210400' => 'osa', 'Os01g0304300' => 'osa', 'Os01g0749100' => 'osa', 'Os02g0745800' => 'osa', 'Os03g0769050' => 'osa', 'Os05g0531500' => 'osa', 'Os06g0724300' => 'osa', 'Os11g0198100' => 'osa', 'Peaxi162Scf00069g01425' => 'pax', 'Peaxi162Scf00280g00811' => 'pax', 'Peaxi162Scf00310g00615' => 'pax', 'Peaxi162Scf00362g00542' => 'pax', 'Peaxi162Scf00461g00310' => 'pax', 'Peaxi162Scf00530g00118' => 'pax', 'Peaxi162Scf00541g00057' => 'pax', 'Peaxi162Scf00661g00017' => 'pax', 'Peaxi162Scf00926g00027' => 'pax', 'Peaxi162Scf01064g00263' => 'pax', 'Peaxi162Scf01211g00135' => 'pax', 'PGR004G2336' => 'pgr', 'PGR042G0327' => 'pgr', 'PGR042G1957' => 'pgr', 'PGR042G2003' => 'pgr', 'PGR042G3929' => 'pgr', 'PGR083G1137' => 'pgr', 'PGR083G1364' => 'pgr', 'PGSC0003DMG400003381' => 'stu', 'PGSC0003DMG400003417' => 'stu', 'PGSC0003DMG400008981' => 'stu', 'PGSC0003DMG400012417' => 'stu', 'PGSC0003DMG400012823' => 'stu', 'PGSC0003DMG400016885' => 'stu', 'PGSC0003DMG400022812' => 'stu', 'PGSC0003DMG400029726' => 'stu', 'PGSC0003DMG401009243' => 'stu', 'PGSC0003DMG401031505' => 'stu', 'PGSC0003DMG402031505' => 'stu', 'Phvul.001G017600' => 'pvu', 'Phvul.002G193500' => 'pvu', 'Phvul.002G228900' => 'pvu', 'Phvul.002G236800' => 'pvu', 'Phvul.003G049500' => 'pvu', 'Phvul.005G072000' => 'pvu', 'Phvul.006G164800' => 'pvu', 'Phvul.006G185100' => 'pvu', 'Phvul.007G090000' => 'pvu', 'Potri.001G399800' => 'ptr', 'Potri.002G149900' => 'ptr', 'Potri.004G044100' => 'ptr', 'Potri.004G177600' => 'ptr', 'Potri.009G138000' => 'ptr', 'Potri.010G094000' => 'ptr', 'Potri.011G053000' => 'ptr', 'Potri.011G119300' => 'ptr', 'Potri.013G113700' => 'ptr', 'Potri.018G107800' => 'ptr', 'Potri.019G084100' => 'ptr', 'Pp3c14_23720' => 'ppa', 'Pp3c16_6340' => 'ppa', 'Pp3c23_13420' => 'ppa', 'Pp3c24_2740' => 'ppa', 'Pp3c25_860' => 'ppa', 'Pp3c8_21750' => 'ppa', 'Prupe.1G273000' => 'ppe', 'Prupe.1G273700' => 'ppe', 'Prupe.1G274100' => 'ppe', 'Prupe.2G023300' => 'ppe', 'Prupe.4G048000' => 'ppe', 'Prupe.4G080400' => 'ppe', 'Prupe.4G181200' => 'ppe', 'Prupe.8G056900' => 'ppe', 'Prupe.8G168700' => 'ppe', 'Psat1g189080' => 'psa', 'Psat1g204760' => 'psa', 'Psat4g175560' => 'psa', 'Psat4g177720' => 'psa', 'Psat5g244240' => 'psa', 'Psat6g010720' => 'psa', 'Psat6g187200' => 'psa', 'Psat7g072040' => 'psa', 'PSO017G3501' => 'pso', 'PSO063G2148' => 'pso', 'PSO063G5608' => 'pso', 'PSO210G6392' => 'pso', 'PSO541G2319' => 'pso', 'PSO541G2836' => 'pso', 'PSO541G4012' => 'pso', 'PSO541G6253' => 'pso', 'PSO675G0580' => 'pso', 'PSO675G0856' => 'pso', 'PSO675G5635' => 'pso', 'PSO675G9157' => 'pso', 'PSO832G1660' => 'pso', 'PSO832G1969' => 'pso', 'QL02p007186' => 'qlo', 'QL02p033904' => 'qlo', 'QL03p064391' => 'qlo', 'QL05p040593' => 'qlo', 'QL05p058242' => 'qlo', 'QL08p021825' => 'qlo', 'QL11p004981' => 'qlo', 'RcHm_v2.0_Chr1g0318301' => 'rch', 'RcHm_v2.0_Chr4g0418501' => 'rch', 'RcHm_v2.0_Chr4g0439971' => 'rch', 'RcHm_v2.0_Chr5g0008541' => 'rch', 'RcHm_v2.0_Chr5g0014101' => 'rch', 'RcHm_v2.0_Chr5g0014131' => 'rch', 'RcHm_v2.0_Chr5g0033621' => 'rch', 'RcHm_v2.0_Chr6g0272041' => 'rch', 'RcHm_v2.0_Chr6g0278831' => 'rch', 'Rhsim02G0130400' => 'rsi', 'Rhsim02G0171100' => 'rsi', 'Rhsim05G0053000' => 'rsi', 'Rhsim05G0053100' => 'rsi', 'Rhsim06G0096500' => 'rsi', 'Rhsim06G0096600' => 'rsi', 'Rhsim06G0199100' => 'rsi', 'Rhsim12G0062300' => 'rsi', 'Rhsim12G0062800' => 'rsi', 'Sabra02G0118600' => 'sbr', 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'Solyc03g079860.2' => 'sly', 'Solyc04g079770.3' => 'sly', 'Solyc05g007430.4' => 'sly', 'Solyc07g063150.3' => 'sly', 'Solyc08g016620.3' => 'sly', 'Solyc09g057590.3' => 'sly', 'Solyc09g057600.1' => 'sly', 'Solyc10g009050.3' => 'sly', 'Solyc11g017420.2' => 'sly', 'Sopen01g053810' => 'spe', 'Sopen02g023040' => 'spe', 'Sopen03g002440' => 'spe', 'Sopen04g033350' => 'spe', 'Sopen05g003310' => 'spe', 'Sopen07g004050' => 'spe', 'Sopen07g031340' => 'spe', 'Sopen08g006990' => 'spe', 'Sopen10g004830' => 'spe', 'Sopen11g009370' => 'spe', 'Sp1g24450' => 'spa', 'Sp1g29670' => 'spa', 'Sp1g39600' => 'spa', 'Sp2g11080' => 'spa', 'Sp2g13970' => 'spa', 'Sp4g16130' => 'spa', 'Sp6g13080' => 'spa', 'Sp7g37270' => 'spa', 'TAR371G0065' => 'tar', 'TAR376G0340' => 'tar', 'TAR376G0435' => 'tar', 'TAR381G0002' => 'tar', 'TAR381G1236' => 'tar', 'TAR624G0055' => 'tar', 'TAR624G0324' => 'tar', 'TAR624G0696' => 'tar', 'TAR624G0906' => 'tar', 'TAR625G0107' => 'tar', 'TAR626G0015' => 'tar', 'TAR626G1356' => 'tar', 'TAR627G0888' => 'tar', 'TAR628G0399' => 'tar', 'TAR628G1327' => 'tar', 'TAR629G2831' => 'tar', 'TAR629G2874' => 'tar', 'TAR633G1432' => 'tar', 'TAR633G2771' => 'tar', 'THA.LOC104803394' => 'tha', 'THA.LOC104805153' => 'tha', 'THA.LOC104806784' => 'tha', 'THA.LOC104810473' => 'tha', 'THA.LOC104813100' => 'tha', 'THA.LOC104814215' => 'tha', 'THA.LOC104815554' => 'tha', 'THA.LOC104820544' => 'tha', 'THA.LOC104824754' => 'tha', 'THA.LOC104827717' => 'tha', 'Thecc.02G031400' => 'tca', 'Thecc.02G055900' => 'tca', 'Thecc.02G350800' => 'tca', 'Thecc.06G150900' => 'tca', 'Thecc.06G186600' => 'tca', 'Thecc.07G089600' => 'tca', 'Thecc.08G020400' => 'tca', 'Thecc.08G182100' => 'tca', 'Thhalv10000873m.g' => 'esa', 'Thhalv10004185m.g' => 'esa', 'Thhalv10006981m.g' => 'esa', 'Thhalv10007204m.g' => 'esa', 'Thhalv10011374m.g' => 'esa', 'Thhalv10013482m.g' => 'esa', 'Thhalv10017801m.g' => 'esa', 'Thhalv10024983m.g' => 'esa', 'TPR.G12072' => 'tpr', 'TPR.G15769' => 'tpr', 'TPR.G16504' => 'tpr', 'TPR.G16506' => 'tpr', 'TPR.G24345' => 'tpr', 'TPR.G26666' => 'tpr', 'TPR.G27320' => 'tpr', 'TPR.G31819' => 'tpr', 'TPR.G38879' => 'tpr', 'TPR.G39015' => 'tpr', 'TPR.G8819' => 'tpr', 'TWI09G0924' => 'twi', 'TWI12G0811' => 'twi', 'TWI12G1294' => 'twi', 'TWI31G0150' => 'twi', 'TWI36G1262' => 'twi', 'TWI38G1287' => 'twi', 'TWI38G1633' => 'twi', 'TWI38G1982' => 'twi', 'TWI39G0116' => 'twi', 'TWI60G1011' => 'twi', 'TWI63G0171' => 'twi', 'TWI73G0839' => 'twi', 'TWI79G1511' => 'twi', 'unitig_0.g915' => 'ugi', 'unitig_0.g916' => 'ugi', 'unitig_21.g20219' => 'ugi', 'unitig_21.g20416' => 'ugi', 'unitig_578.g16132' => 'ugi', 'unitig_578.g16718' => 'ugi', 'unitig_62.g23481' => 'ugi', 'unitig_744.g24535' => 'ugi', 'unitig_749.g13525' => 'ugi', 'vmacro01248' => 'vma', 'vmacro02290' => 'vma', 'vmacro10946' => 'vma', 'vmacro11865' => 'vma', 'vmacro12493' => 'vma', 'vmacro17322' => 'vma', 'vmacro21599' => 'vma', 'vmacro23041' => 'vma', 'VMungo0251G0004' => 'vmu', 'VMungo0251G2639' => 'vmu', 'VMungo0251G2967' => 'vmu', 'VMungo0540G0864' => 'vmu', 'VMungo0540G1569' => 'vmu', 'VMungo0647G0317' => 'vmu', 'VMungo0720G1373' => 'vmu', 'VMungo0720G1508' => 'vmu', 'VMungo1080G0485' => 'vmu', 'VMungo1215G3177' => 'vmu', 'Zm00001eb112600' => 'zma', 'Zm00001eb120220' => 'zma', 'Zm00001eb153240' => 'zma', 'Zm00001eb168880' => 'zma', 'Zm00001eb213920' => 'zma', 'Zm00001eb228280' => 'zma', 'Zm00001eb254580' => 'zma', 'Zm00001eb272180' => 'zma', 'Zm00001eb293190' => 'zma', 'Zm00001eb322930' => 'zma', 'Zm00001eb353360' => 'zma', 'Zm00001eb353390' => 'zma', 'Zm00001eb353430' => 'zma', 'Zm00001eb353440' => 'zma', 'Zm00001eb353780' => 'zma' ), 'gf_id' => 'HOM05D000499', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000499' ), 'data_identifier' => 'HOM05D000499', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000499', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1066', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p29780' => 'bna', 'A02p33180' => 'bna', 'A03p16470' => 'bna', 'A03p66010' => 'bna', 'A04p25970' => 'bna', 'A06p01270' => 'bna', 'A06p46080' => 'bna', 'A07p11400' => 'bna', 'A08p01840' => 'bna', 'A08p08230' => 'bna', 'A08p25740' => 'bna', 'A09p32070' => 'bna', 'A09p37830' => 'bna', 'A09p42840' => 'bna', 'A09p42850' => 'bna', 'Aa31LG10G2060' => 'aar', 'Aa31LG2G7410' => 'aar', 'Aa31LG6G10200' => 'aar', 'Aa31LG6G16680' => 'aar', 'Aa31LG6G8470' => 'aar', 'Aa31LG9G12730' => 'aar', 'Aa31LG9G13680' => 'aar', 'Aa31LG9G14920' => 'aar', 'Aa31LG9G6650' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4977' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5467' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3254' => 'aag', 'Actinidia02578' => 'ach', 'Actinidia07693' => 'ach', 'Actinidia08413' => 'ach', 'Actinidia08414' => 'ach', 'Actinidia15289' => 'ach', 'Actinidia19871' => 'ach', 'Actinidia21475' => 'ach', 'Actinidia22576' => 'ach', 'Actinidia28327' => 'ach', 'Actinidia32491' => 'ach', 'Actinidia39463' => 'ach', 'Actinidia39571' => 'ach', 'Ah.01g013750' => 'amhyb', 'Ah.01g023210' => 'amhyb', 'Ah.04g164850' => 'amhyb', 'Ah.05g178060' => 'amhyb', 'Ah.07g204270' => 'amhyb', 'Ah.07g208480' => 'amhyb', 'Ah.09g237410' => 'amhyb', 'Ah.14g089460' => 'amhyb', 'AL1G41790' => 'aly', 'AL1G49050' => 'aly', 'AL1G53810' => 'aly', 'AL1G61400' => 'aly', 'AL4G18580' => 'aly', 'AL5G12510' => 'aly', 'AL5G12540' => 'aly', 'AL6G43230' => 'aly', 'AL7G10370' => 'aly', 'AL7G19250' => 'aly', 'AL8G12240' => 'aly', 'AL8G18540' => 'aly', 'Aqoxy1G02409' => 'aox', 'Aqoxy2G03993' => 'aox', 'Aqoxy3G03357' => 'aox', 'Aqoxy4G00785' => 'aox', 'Aqoxy5G02598' => 'aox', 'Aqoxy6G00132' => 'aox', 'Aqoxy7G01776' => 'aox', 'Aqoxy7G02316' => 'aox', 'Aqoxy7G03973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.12AFKW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B8730' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27IQR1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3F75VG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3RE0GA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41TCQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.527VTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FIR39' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5W8UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DA38EV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ63HS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H1I32C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HC27T5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4M8AP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7N3CZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9UVDZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LS1NQA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT1D4B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SKC4TM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCFV76' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF9Q1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQWD9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1ZM88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WE07RT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YCK7VH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJE6Q6' => 'arhy', 'AT1G28240' => 'ath', 'AT1G34550' => 'ath', 'AT1G53040' => 'ath', 'AT2G02910' => 'ath', 'AT4G09630' => 'ath', 'AT4G38500' => 'ath', 'AT5G42660' => 'ath', 'AT5G46220' => 'ath', 'ATR0152G026' => 'atr', 'ATR0564G343' => 'atr', 'ATR0706G151' => 'atr', 'ATR0733G207' => 'atr', 'ATR0751G234' => 'atr', 'ATR0807G048' => 'atr', 'ATR1091G084' => 'atr', 'Atru.chr10.1229' => 'acertr', 'Atru.chr10.1230' => 'acertr', 'Atru.chr10.1874' => 'acertr', 'Atru.chr11.1808' => 'acertr', 'Atru.chr13.1795' => 'acertr', 'Atru.chr13.570' => 'acertr', 'Atru.chr2.2608' => 'acertr', 'Atru.chr2.2609' => 'acertr', 'Atru.chr5.3428' => 'acertr', 'Atru.chr8.1171' => 'acertr', 'AUR62004651' => 'cqu', 'AUR62008675' => 'cqu', 'AUR62010014' => 'cqu', 'AUR62013004' => 'cqu', 'AUR62014825' => 'cqu', 'AUR62015015' => 'cqu', 'AUR62015151' => 'cqu', 'AUR62017020' => 'cqu', 'AUR62019422' => 'cqu', 'AUR62023570' => 'cqu', 'AUR62025571' => 'cqu', 'AUR62029098' => 'cqu', 'AUR62033863' => 'cqu', 'AUR62034296' => 'cqu', 'AUR62040075' => 'cqu', 'BcaB02g07334' => 'bca', 'BcaB02g10575' => 'bca', 'BcaB03g12119' => 'bca', 'BcaB03g12120' => 'bca', 'BcaB03g13945' => 'bca', 'BcaB04g17123' => 'bca', 'BcaB04g17867' => 'bca', 'BcaB04g19839' => 'bca', 'BcaB07g30317' => 'bca', 'BcaB07g32432' => 'bca', 'BcaB07g33362' => 'bca', 'BcaB08g36611' => 'bca', 'BcaC01g00028' => 'bca', 'BcaC01g01356' => 'bca', 'BcaC01g02034' => 'bca', 'BcaC01g06051' => 'bca', 'BcaC03g16839' => 'bca', 'BcaC03g17176' => 'bca', 'BcaC05g26829' => 'bca', 'BcaC06g31490' => 'bca', 'BcaC06g35344' => 'bca', 'BcaC06g36570' => 'bca', 'BcaC07g37537' => 'bca', 'BcaC08g43491' => 'bca', 'BcaC08g43773' => 'bca', 'BcaNung00234' => 'bca', 'BcaNung01982' => 'bca', 'BcaNung03707' => 'bca', 'BcaNung06454' => 'bca', 'BolC2t10762H' => 'bol', 'BolC2t11191H' => 'bol', 'BolC3t14322H' => 'bol', 'BolC3t19747H' => 'bol', 'BolC3t21425H' => 'bol', 'BolC4t27800H' => 'bol', 'BolC5t31423H' => 'bol', 'BolC6t35951H' => 'bol', 'BolC6t36282H' => 'bol', 'BolC7t40678H' => 'bol', 'BolC7t40679H' => 'bol', 'BolC7t42222H' => 'bol', 'BolC7t43492H' => 'bol', 'BolC7t46785H' => 'bol', 'BolC8t47853H' => 'bol', 'BolC9t56805H' => 'bol', 'BraA02t08000Z' => 'bra', 'BraA02t08341Z' => 'bra', 'BraA03t10936Z' => 'bra', 'BraA03t15657Z' => 'bra', 'BraA04t18100Z' => 'bra', 'BraA05t20523Z' => 'bra', 'BraA06t23353Z' => 'bra', 'BraA06t27473Z' => 'bra', 'BraA06t27769Z' => 'bra', 'BraA07t28928Z' => 'bra', 'BraA08t32236Z' => 'bra', 'BraA08t32841Z' => 'bra', 'BraA08t34524Z' => 'bra', 'BraA09t38742Z' => 'bra', 'BraA09t39295Z' => 'bra', 'C02p47180' => 'bna', 'C02p50990' => 'bna', 'C03p19360' => 'bna', 'C03p74950' => 'bna', 'C03p91000' => 'bna', 'C04p63260' => 'bna', 'C05p27050' => 'bna', 'C06p08750' => 'bna', 'C06p11490' => 'bna', 'C07p02820' => 'bna', 'C07p17180' => 'bna', 'C07p29440' => 'bna', 'C07p63730' => 'bna', 'C09p39260' => 'bna', 'CAN.G1164.34' => 'can', 'CAN.G1164.39' => 'can', 'CAN.G1530.3' => 'can', 'CAN.G162.61' => 'can', 'CAN.G176.6' => 'can', 'CAN.G289.49' => 'can', 'CAN.G370.21' => 'can', 'CAN.G370.22' => 'can', 'CAN.G371.117' => 'can', 'CAN.G58.37' => 'can', 'CAN.G588.98' => 'can', 'CANSAT21G2266' => 'cansat', 'CANSAT25G2799' => 'cansat', 'CANSAT35G0862' => 'cansat', 'CANSAT35G1704' => 'cansat', 'CANSAT35G1760' => 'cansat', 'CANSAT56G3971' => 'cansat', 'CANSAT56G4116' => 'cansat', 'CANSAT80G1259' => 'cansat', 'CARHR027730' => 'chi', 'CARHR033880' => 'chi', 'CARHR043270' => 'chi', 'CARHR145330' => 'chi', 'CARHR145340' => 'chi', 'CARHR175570' => 'chi', 'CARHR181570' => 'chi', 'CARHR258470' => 'chi', 'CARHR260490' => 'chi', 'CARHR294220' => 'chi', 'Carub.0001s2668' => 'cru', 'Carub.0001s3257' => 'cru', 'Carub.0001s4220' => 'cru', 'Carub.0005s0179' => 'cru', 'Carub.0006s2807' => 'cru', 'Carub.0007s0039' => 'cru', 'Carub.0008s0169' => 'cru', 'Carub.0008s0636' => 'cru', 'Ca_00338_v3' => 'car', 'Ca_00542_v3' => 'car', 'Ca_01844_v3' => 'car', 'Ca_10611_v3' => 'car', 'Ca_13326_v3' => 'car', 'Ca_17944_v3' => 'car', 'Ca_18546_v3' => 'car', 'Ca_24219_v3' => 'car', 'Ca_29972_v3' => 'car', 'CBR_g3681' => 'cbr', 'CBR_g40021' => 'cbr', 'Cc01_g08140' => 'ccan', 'Cc02_g13410' => 'ccan', 'Cc02_g37480' => 'ccan', 'Cc05_g12030' => 'ccan', 'Cc09_g03370' => 'ccan', 'Cc09_g10300' => 'ccan', 'Cc10_g03530' => 'ccan', 'Cc10_g11380' => 'ccan', 'CDE01G0176' => 'cde', 'CDE02G0675' => 'cde', 'CDE02G0942' => 'cde', 'CDE02G1153' => 'cde', 'CDE02G4177' => 'cde', 'CDE04G2117' => 'cde', 'CDE04G2736' => 'cde', 'CDE08G1161' => 'cde', 'CDE09G1238' => 'cde', 'Cfa000467' => 'cfa', 'Cfa000947' => 'cfa', 'Cfa004969' => 'cfa', 'Cfa005284' => 'cfa', 'Cfa008993' => 'cfa', 'Cfa018187' => 'cfa', 'Cfa018454' => 'cfa', 'Cfa020585' => 'cfa', 'Ciclev10000424m.g' => 'ccl', 'Ciclev10003605m.g' => 'ccl', 'Ciclev10007828m.g' => 'ccl', 'Ciclev10014620m.g' => 'ccl', 'Ciclev10015169m.g' => 'ccl', 'Ciclev10018291m.g' => 'ccl', 'Ciclev10028256m.g' => 'ccl', 'Ciclev10033822m.g' => 'ccl', 'CiPaw.05G060300' => 'cil', 'CiPaw.05G085000' => 'cil', 'CiPaw.06G083700' => 'cil', 'CiPaw.06G120300' => 'cil', 'CiPaw.09G060500' => 'cil', 'CiPaw.09G123800' => 'cil', 'CiPaw.11G169700' => 'cil', 'CiPaw.12G118300' => 'cil', 'CiPaw.15G071000' => 'cil', 'CiPaw.15G081900' => 'cil', 'ClCG01G024610' => 'cla', 'ClCG03G006070' => 'cla', 'ClCG05G019250' => 'cla', 'ClCG09G009500' => 'cla', 'ClCG11G008200' => 'cla', 'ClCG11G018080' => 'cla', 'COL.COLO4_17373' => 'col', 'COL.COLO4_22994' => 'col', 'COL.COLO4_26389' => 'col', 'COL.COLO4_27170' => 'col', 'COL.COLO4_31074' => 'col', 'COL.COLO4_31465' => 'col', 'COL.COLO4_36438' => 'col', 'COL.COLO4_36439' => 'col', 'Cpa.g.c38781' => 'cpa', 'Cpa.g.sc128.12' => 'cpa', 'Cpa.g.sc166.7' => 'cpa', 'Cpa.g.sc166.8' => 'cpa', 'Cpa.g.sc20.111' => 'cpa', 'Cpa.g.sc27.31' => 'cpa', 'Cpa.g.sc64.36' => 'cpa', 'Cpa.g.sc64.37' => 'cpa', 'Cpa.g.sc66.49' => 'cpa', 'Cpa.g.sc80.64' => 'cpa', 'CsaV3_1G012320' => 'csa', 'CsaV3_2G008480' => 'csa', 'CsaV3_2G033450' => 'csa', 'CsaV3_3G044830' => 'csa', 'CsaV3_4G033710' => 'csa', 'CsaV3_6G051730' => 'csa', 'CsaV3_7G025350' => 'csa', 'CSS0001067' => 'camsi', 'CSS0005996' => 'camsi', 'CSS0006590' => 'camsi', 'CSS0009673' => 'camsi', 'CSS0010201' => 'camsi', 'CSS0010549' => 'camsi', 'CSS0011364' => 'camsi', 'CSS0014473' => 'camsi', 'CSS0014961' => 'camsi', 'CSS0020191' => 'camsi', 'CSS0021165' => 'camsi', 'CSS0022306' => 'camsi', 'CSS0030591' => 'camsi', 'CSS0030696' => 'camsi', 'CSS0032653' => 'camsi', 'CSS0037487' => 'camsi', 'CSS0041102' => 'camsi', 'CSS0041261' => 'camsi', 'CSS0046246' => 'camsi', 'CSS0049256' => 'camsi', 'DCAR_004075' => 'dca', 'DCAR_011538' => 'dca', 'DCAR_019553' => 'dca', 'DCAR_020952' => 'dca', 'DCAR_021739' => 'dca', 'DCAR_027407' => 'dca', 'DCAR_027913' => 'dca', 'DCAR_028066' => 'dca', 'Dinv05899' => 'din', 'Dinv07563' => 'din', 'Dinv08010' => 'din', 'Dinv14125' => 'din', 'Dinv20172' => 'din', 'Dinv30743' => 'din', 'Dinv31229' => 'din', 'Dinv34162' => 'din', 'Dinv36028' => 'din', 'Dinv39368' => 'din', 'Dinv40565' => 'din', 'Dinv41706' => 'din', 'Duzib052G0089' => 'dzi', 'Duzib116G0641' => 'dzi', 'Duzib132G0069' => 'dzi', 'Duzib132G1219' => 'dzi', 'Duzib147G0278' => 'dzi', 'Duzib160G0480' => 'dzi', 'Duzib170G0661' => 'dzi', 'Duzib177G0591' => 'dzi', 'Duzib187G1353' => 'dzi', 'Duzib192G0858' => 'dzi', 'Duzib192G0883' => 'dzi', 'Duzib213G0506' => 'dzi', 'Duzib235G0289' => 'dzi', 'Duzib251G0422' => 'dzi', 'ECA232G3898' => 'eca', 'ECA233G5950' => 'eca', 'ECA234G1699' => 'eca', 'ECA234G2421' => 'eca', 'ECA236G0426' => 'eca', 'ECA236G4331' => 'eca', 'ECA248G2573' => 'eca', 'EL10Ac1g00077' => 'bvu', 'EL10Ac1g01746' => 'bvu', 'EL10Ac2g03464' => 'bvu', 'EL10Ac4g08176' => 'bvu', 'EL10Ac7g17521' => 'bvu', 'EL10Ac8g20386' => 'bvu', 'EL10Ac9g21343' => 'bvu', 'EL10Ac9g22688' => 'bvu', 'Eucgr.B03434' => 'egr', 'Eucgr.D00618' => 'egr', 'Eucgr.E02395' => 'egr', 'Eucgr.F01129' => 'egr', 'Eucgr.F02622' => 'egr', 'Eucgr.F04207' => 'egr', 'FAN01G0570' => 'fan', 'FAN03G3351' => 'fan', 'FAN06G3702' => 'fan', 'FAN07G2149' => 'fan', 'FAN10G3758' => 'fan', 'FAN11G1170' => 'fan', 'FAN11G2050' => 'fan', 'FAN11G2724' => 'fan', 'FAN12G1700' => 'fan', 'FAN12G2028' => 'fan', 'FAN15G1160' => 'fan', 'FAN15G3063' => 'fan', 'FAN16G2540' => 'fan', 'FAN16G3077' => 'fan', 'FAN16G3624' => 'fan', 'FAN17G0221' => 'fan', 'FAN20G2492' => 'fan', 'FAN20G2905' => 'fan', 'FAN21G0548' => 'fan', 'FAN21G1300' => 'fan', 'FAN22G0077' => 'fan', 'FAN22G1315' => 'fan', 'FAN24G1280' => 'fan', 'FAN24G1445' => 'fan', 'FAN24G3527' => 'fan', 'FAN25G0464' => 'fan', 'FAN25G2885' => 'fan', 'FAN25G3270' => 'fan', 'FAN27G1101' => 'fan', 'FAN27G2846' => 'fan', 'FAN27G3524' => 'fan', 'FvH4_2g11770' => 'fve', 'FvH4_2g15630' => 'fve', 'FvH4_3g05570' => 'fve', 'FvH4_3g09110' => 'fve', 'FvH4_3g19940' => 'fve', 'FvH4_4g04821' => 'fve', 'FvH4_4g31480' => 'fve', 'FvH4_7g01740' => 'fve', 'Glyma.05G130400' => 'gma', 'Glyma.05G156400' => 'gma', 'Glyma.07G197000' => 'gma', 'Glyma.08G085151' => 'gma', 'Glyma.08G114500' => 'gma', 'Glyma.08G300400' => 'gma', 'Glyma.10G215800' => 'gma', 'Glyma.12G224400' => 'gma', 'Glyma.13G179300' => 'gma', 'Glyma.13G218151' => 'gma', 'Glyma.13G238800' => 'gma', 'Glyma.13G276900' => 'gma', 'Glyma.14G078200' => 'gma', 'Glyma.15G074500' => 'gma', 'Glyma.15G094100' => 'gma', 'Glyma.17G247200' => 'gma', 'Glyma.18G120100' => 'gma', 'Glyma.20G176000' => 'gma', 'Gohir.A01G063600' => 'ghi', 'Gohir.A01G170301' => 'ghi', 'Gohir.A02G060500' => 'ghi', 'Gohir.A05G133850' => 'ghi', 'Gohir.A05G161400' => 'ghi', 'Gohir.A06G012900' => 'ghi', 'Gohir.A06G035901' => 'ghi', 'Gohir.A06G127100' => 'ghi', 'Gohir.A06G210500' => 'ghi', 'Gohir.A08G008650' => 'ghi', 'Gohir.A09G072700' => 'ghi', 'Gohir.A09G088301' => 'ghi', 'Gohir.A10G040600' => 'ghi', 'Gohir.A12G036300' => 'ghi', 'Gohir.A12G143350' => 'ghi', 'Gohir.A12G165500' => 'ghi', 'Gohir.A13G145700' => 'ghi', 'Gohir.D01G050000' => 'ghi', 'Gohir.D01G051366' => 'ghi', 'Gohir.D01G161350' => 'ghi', 'Gohir.D02G065900' => 'ghi', 'Gohir.D05G164200' => 'ghi', 'Gohir.D05G355500' => 'ghi', 'Gohir.D06G010400' => 'ghi', 'Gohir.D06G111250' => 'ghi', 'Gohir.D06G132000' => 'ghi', 'Gohir.D06G210500' => 'ghi', 'Gohir.D07G165675' => 'ghi', 'Gohir.D08G062240' => 'ghi', 'Gohir.D08G086101' => 'ghi', 'Gohir.D08G138060' => 'ghi', 'Gohir.D09G072300' => 'ghi', 'Gohir.D10G041400' => 'ghi', 'Gohir.D11G191020' => 'ghi', 'Gohir.D11G212066' => 'ghi', 'Gohir.D12G036300' => 'ghi', 'Gohir.D12G168600' => 'ghi', 'Gohir.D13G150600' => 'ghi', 'Gorai.001G057300' => 'gra', 'Gorai.002G069900' => 'gra', 'Gorai.002G200000' => 'gra', 'Gorai.003G067600' => 'gra', 'Gorai.005G074800' => 'gra', 'Gorai.006G087300' => 'gra', 'Gorai.008G037500' => 'gra', 'Gorai.008G181400' => 'gra', 'Gorai.009G169400' => 'gra', 'Gorai.009G387900' => 'gra', 'Gorai.010G013300' => 'gra', 'Gorai.010G153800' => 'gra', 'Gorai.010G255800' => 'gra', 'Gorai.011G043700' => 'gra', 'Gorai.011G198900' => 'gra', 'Gorai.013G168400' => 'gra', 'GSVIVG01005212001' => 'vvi', 'GSVIVG01006163001' => 'vvi', 'GSVIVG01009625001' => 'vvi', 'GSVIVG01014338001' => 'vvi', 'GSVIVG01020005001' => 'vvi', 'GSVIVG01021450001' => 'vvi', 'GSVIVG01023975001' => 'vvi', 'GSVIVG01034490001' => 'vvi', 'HanXRQChr04g0112071' => 'han', 'HanXRQChr05g0131151' => 'han', 'HanXRQChr09g0262371' => 'han', 'HanXRQChr09g0268401' => 'han', 'HanXRQChr10g0279241' => 'han', 'HanXRQChr10g0297961' => 'han', 'HanXRQChr11g0326231' => 'han', 'HanXRQChr11g0328471' => 'han', 'HanXRQChr16g0507941' => 'han', 'HanXRQChr17g0560211' => 'han', 'Haze_02108' => 'cav', 'Haze_02428' => 'cav', 'Haze_05593' => 'cav', 'Haze_06448' => 'cav', 'Haze_09427' => 'cav', 'Haze_12022' => 'cav', 'Haze_17612' => 'cav', 'Haze_17928' => 'cav', 'Hma1.2p1_0032F.1_g019250' => 'hma', 'Hma1.2p1_0163F.1_g072690' => 'hma', 'Hma1.2p1_0265F.1_g106710' => 'hma', 'Hma1.2p1_0286F.1_g113970' => 'hma', 'Hma1.2p1_0363F.1_g136640' => 'hma', 'Hma1.2p1_0584F.1_g183470' => 'hma', 'Hma1.2p1_0885F.1_g232570' => 'hma', 'HPP92_006022' => 'vpl', 'HPP92_007320' => 'vpl', 'HPP92_011521' => 'vpl', 'HPP92_019387' => 'vpl', 'HPP92_024038' => 'vpl', 'Hund05891' => 'sun', 'Hund06450' => 'sun', 'Hund12053' => 'sun', 'Hund16800' => 'sun', 'Hund21222' => 'sun', 'Hund22896' => 'sun', 'Hund23746' => 'sun', 'Hund27083' => 'sun', 'Lalb_Chr02g0141831' => 'lal', 'Lalb_Chr02g0141841' => 'lal', 'Lalb_Chr05g0220411' => 'lal', 'Lalb_Chr06g0162081' => 'lal', 'Lalb_Chr09g0327651' => 'lal', 'Lalb_Chr13g0295051' => 'lal', 'Lalb_Chr15g0086801' => 'lal', 'Lalb_Chr16g0383781' => 'lal', 'Lalb_Chr16g0383791' => 'lal', 'Lalb_Chr18g0055441' => 'lal', 'Lalb_Chr18g0059611' => 'lal', 'Lalb_Chr20g0109661' => 'lal', 'Lalb_Chr20g0109831' => 'lal', 'Lalb_Chr20g0121871' => 'lal', 'Lalb_Chr22g0355361' => 'lal', 'Lalb_Chr25g0286371' => 'lal', 'Lj1A1187G43' => 'lonja', 'Lj1A1205T50' => 'lonja', 'Lj1A800G33' => 'lonja', 'Lj1C1187T7' => 'lonja', 'Lj1C843T11' => 'lonja', 'Lj1g0010940' => 'lja', 'Lj2A288T69' => 'lonja', 'Lj3g0024276' => 'lja', 'Lj4A47T76' => 'lonja', 'Lj4g0005805' => 'lja', 'Lj4g0006097' => 'lja', 'Lj4g0008528' => 'lja', 'Lj4g0024907' => 'lja', 'Lj5g0012472' => 'lja', 'Lj5g0018648' => 'lja', 'Lj6C789G1' => 'lonja', 'Lj6g0004000' => 'lja', 'Lj7A292G67' => 'lonja', 'Lj7A292T64' => 'lonja', 'Lj9A400T58' => 'lonja', 'Lsat_1_v5_gn_1_126181' => 'lsa', 'Lsat_1_v5_gn_4_123041' => 'lsa', 'Lsat_1_v5_gn_4_133620' => 'lsa', 'Lsat_1_v5_gn_4_53221' => 'lsa', 'Lsat_1_v5_gn_4_71961' => 'lsa', 'Lsat_1_v5_gn_7_105241' => 'lsa', 'Lsat_1_v5_gn_7_21361' => 'lsa', 'Lsat_1_v5_gn_7_28860' => 'lsa', 'Lsat_1_v5_gn_7_31260' => 'lsa', 'Lsat_1_v5_gn_8_52801' => 'lsa', 'Manes.02G191400' => 'mes', 'Manes.03G110100' => 'mes', 'Manes.04G071100' => 'mes', 'Manes.05G100500' => 'mes', 'Manes.05G164700' => 'mes', 'Manes.15G087000' => 'mes', 'Manes.15G121500' => 'mes', 'Manes.16G028300' => 'mes', 'Manes.17G046100' => 'mes', 'Manes.17G069800' => 'mes', 'Manes.18G100500' => 'mes', 'Mapoly0002s0109' => 'mpo', 'Mapoly0024s0007' => 'mpo', 'Mapoly0089s0032' => 'mpo', 'MBI04_g42241_MAGBIO' => 'mbi', 'MBI05_g11988_MAGBIO' => 'mbi', 'MBI05_g35452_MAGBIO' => 'mbi', 'MBI07_g30179_MAGBIO' => 'mbi', 'MBI07_g35859_MAGBIO' => 'mbi', 'MBI07_g35860_MAGBIO' => 'mbi', 'MBI07_g37166_MAGBIO' => 'mbi', 'MBI08_g18172_MAGBIO' => 'mbi', 'MBI09_g08441_MAGBIO' => 'mbi', 'MBI13_g01676_MAGBIO' => 'mbi', 'MBI14_g42955_MAGBIO' => 'mbi', 'MBI16_g13161_MAGBIO' => 'mbi', 'MBI17_g27204_MAGBIO' => 'mbi', 'MBI19_g21595_MAGBIO' => 'mbi', 'MD00G1148400' => 'mdo', 'MD02G1301200' => 'mdo', 'MD03G1227800' => 'mdo', 'MD05G1041100' => 'mdo', 'MD05G1124800' => 'mdo', 'MD05G1284000' => 'mdo', 'MD05G1338800' => 'mdo', 'MD05G1338900' => 'mdo', 'MD07G1022800' => 'mdo', 'MD10G1047500' => 'mdo', 'MD10G1127500' => 'mdo', 'MD10G1262300' => 'mdo', 'MD10G1293800' => 'mdo', 'MD16G1074300' => 'mdo', 'Medtr1g021670' => 'mtr', 'Medtr1g096320' => 'mtr', 'Medtr2g013690' => 'mtr', 'Medtr2g019450' => 'mtr', 'Medtr2g085170' => 'mtr', 'Medtr4g088785' => 'mtr', 'Medtr8g055930' => 'mtr', 'Medtr8g085850' => 'mtr', 'MELO3C002605.2' => 'cme', 'MELO3C003891.2' => 'cme', 'MELO3C004012.2' => 'cme', 'MELO3C007134.2' => 'cme', 'MELO3C008118.2' => 'cme', 'MELO3C016700.2' => 'cme', 'MELO3C024127.2' => 'cme', 'MELO3C033361.2' => 'cme', 'MELO3C033362.2' => 'cme', 'Migut.C00430' => 'egut', 'Migut.C01246' => 'egut', 'Migut.E00101' => 'egut', 'Migut.H01486' => 'egut', 'Migut.H01939' => 'egut', 'Migut.K00360' => 'egut', 'Migut.M00910' => 'egut', 'Migut.M01139' => 'egut', 'Migut.N02677' => 'egut', 'MSTRG.13252' => 'ama', 'MSTRG.14701' => 'ama', 'MSTRG.1521' => 'ama', 'MSTRG.15884' => 'ama', 'MSTRG.16242' => 'ama', 'MSTRG.22285' => 'ama', 'MSTRG.22444' => 'ama', 'MSTRG.2349' => 'ama', 'MSTRG.26308' => 'ama', 'MSTRG.28296' => 'ama', 'MSTRG.9895' => 'ama', 'Nitab4.5_0000110g0060' => 'nta', 'Nitab4.5_0000420g0130' => 'nta', 'Nitab4.5_0000422g0030' => 'nta', 'Nitab4.5_0000560g0180' => 'nta', 'Nitab4.5_0000703g0100' => 'nta', 'Nitab4.5_0000786g0200' => 'nta', 'Nitab4.5_0001336g0020' => 'nta', 'Nitab4.5_0001796g0030' => 'nta', 'Nitab4.5_0003348g0060' => 'nta', 'Nitab4.5_0003698g0040' => 'nta', 'Nitab4.5_0003942g0090' => 'nta', 'Nitab4.5_0004775g0070' => 'nta', 'Nitab4.5_0004864g0030' => 'nta', 'Nitab4.5_0005615g0020' => 'nta', 'Nitab4.5_0009288g0030' => 'nta', 'Nitab4.5_0009341g0010' => 'nta', 'Nitab4.5_0009535g0010' => 'nta', 'Nn1g03995' => 'nnu', 'Nn1g04100' => 'nnu', 'Nn1g06530' => 'nnu', 'Nn3g16404' => 'nnu', 'Nn3g17212' => 'nnu', 'Nn3g20776' => 'nnu', 'Nn3g21923' => 'nnu', 'Nn5g27737' => 'nnu', 'Nn5g29461' => 'nnu', 'Nn7g38355' => 'nnu', 'Nn8g39873' => 'nnu', 'Oeu000548.2' => 'oeu', 'Oeu004672.1' => 'oeu', 'Oeu015605.2' => 'oeu', 'Oeu016092.1' => 'oeu', 'Oeu017879.3' => 'oeu', 'Oeu024910.1' => 'oeu', 'Oeu028965.1' => 'oeu', 'Oeu031269.1' => 'oeu', 'Oeu031270.1' => 'oeu', 'Oeu032535.1' => 'oeu', 'Oeu034151.1' => 'oeu', 'Oeu034152.1' => 'oeu', 'Oeu034588.2' => 'oeu', 'Oeu050846.1' => 'oeu', 'Oeu050849.2' => 'oeu', 'Oeu051063.2' => 'oeu', 'Oeu052368.1' => 'oeu', 'Oeu052370.1' => 'oeu', 'Os01g0210400' => 'osa', 'Os01g0304300' => 'osa', 'Os01g0749100' => 'osa', 'Os02g0745800' => 'osa', 'Os03g0769050' => 'osa', 'Os05g0531500' => 'osa', 'Os06g0724300' => 'osa', 'Os11g0198100' => 'osa', 'Peaxi162Scf00069g01425' => 'pax', 'Peaxi162Scf00280g00811' => 'pax', 'Peaxi162Scf00310g00615' => 'pax', 'Peaxi162Scf00362g00542' => 'pax', 'Peaxi162Scf00461g00310' => 'pax', 'Peaxi162Scf00530g00118' => 'pax', 'Peaxi162Scf00541g00057' => 'pax', 'Peaxi162Scf00661g00017' => 'pax', 'Peaxi162Scf00926g00027' => 'pax', 'Peaxi162Scf01064g00263' => 'pax', 'Peaxi162Scf01211g00135' => 'pax', 'PGR004G2336' => 'pgr', 'PGR042G0327' => 'pgr', 'PGR042G1957' => 'pgr', 'PGR042G2003' => 'pgr', 'PGR042G3929' => 'pgr', 'PGR083G1137' => 'pgr', 'PGR083G1364' => 'pgr', 'PGSC0003DMG400003381' => 'stu', 'PGSC0003DMG400003417' => 'stu', 'PGSC0003DMG400008981' => 'stu', 'PGSC0003DMG400012417' => 'stu', 'PGSC0003DMG400012823' => 'stu', 'PGSC0003DMG400016885' => 'stu', 'PGSC0003DMG400022812' => 'stu', 'PGSC0003DMG400029726' => 'stu', 'PGSC0003DMG401009243' => 'stu', 'PGSC0003DMG401031505' => 'stu', 'PGSC0003DMG402031505' => 'stu', 'Phvul.001G017600' => 'pvu', 'Phvul.002G193500' => 'pvu', 'Phvul.002G228900' => 'pvu', 'Phvul.002G236800' => 'pvu', 'Phvul.003G049500' => 'pvu', 'Phvul.005G072000' => 'pvu', 'Phvul.006G164800' => 'pvu', 'Phvul.006G185100' => 'pvu', 'Phvul.007G090000' => 'pvu', 'Potri.001G399800' => 'ptr', 'Potri.002G149900' => 'ptr', 'Potri.004G044100' => 'ptr', 'Potri.004G177600' => 'ptr', 'Potri.009G138000' => 'ptr', 'Potri.010G094000' => 'ptr', 'Potri.011G053000' => 'ptr', 'Potri.011G119300' => 'ptr', 'Potri.013G113700' => 'ptr', 'Potri.018G107800' => 'ptr', 'Potri.019G084100' => 'ptr', 'Pp3c14_23720' => 'ppa', 'Pp3c16_6340' => 'ppa', 'Pp3c23_13420' => 'ppa', 'Pp3c24_2740' => 'ppa', 'Pp3c25_860' => 'ppa', 'Pp3c8_21750' => 'ppa', 'Prupe.1G273000' => 'ppe', 'Prupe.1G273700' => 'ppe', 'Prupe.1G274100' => 'ppe', 'Prupe.2G023300' => 'ppe', 'Prupe.4G048000' => 'ppe', 'Prupe.4G080400' => 'ppe', 'Prupe.4G181200' => 'ppe', 'Prupe.8G056900' => 'ppe', 'Prupe.8G168700' => 'ppe', 'Psat1g189080' => 'psa', 'Psat1g204760' => 'psa', 'Psat4g175560' => 'psa', 'Psat4g177720' => 'psa', 'Psat5g244240' => 'psa', 'Psat6g010720' => 'psa', 'Psat6g187200' => 'psa', 'Psat7g072040' => 'psa', 'PSO017G3501' => 'pso', 'PSO063G2148' => 'pso', 'PSO063G5608' => 'pso', 'PSO210G6392' => 'pso', 'PSO541G2319' => 'pso', 'PSO541G2836' => 'pso', 'PSO541G4012' => 'pso', 'PSO541G6253' => 'pso', 'PSO675G0580' => 'pso', 'PSO675G0856' => 'pso', 'PSO675G5635' => 'pso', 'PSO675G9157' => 'pso', 'PSO832G1660' => 'pso', 'PSO832G1969' => 'pso', 'QL02p007186' => 'qlo', 'QL02p033904' => 'qlo', 'QL03p064391' => 'qlo', 'QL05p040593' => 'qlo', 'QL05p058242' => 'qlo', 'QL08p021825' => 'qlo', 'QL11p004981' => 'qlo', 'RcHm_v2.0_Chr1g0318301' => 'rch', 'RcHm_v2.0_Chr4g0418501' => 'rch', 'RcHm_v2.0_Chr4g0439971' => 'rch', 'RcHm_v2.0_Chr5g0008541' => 'rch', 'RcHm_v2.0_Chr5g0014101' => 'rch', 'RcHm_v2.0_Chr5g0014131' => 'rch', 'RcHm_v2.0_Chr5g0033621' => 'rch', 'RcHm_v2.0_Chr6g0272041' => 'rch', 'RcHm_v2.0_Chr6g0278831' => 'rch', 'Rhsim02G0130400' => 'rsi', 'Rhsim02G0171100' => 'rsi', 'Rhsim05G0053000' => 'rsi', 'Rhsim05G0053100' => 'rsi', 'Rhsim06G0096500' => 'rsi', 'Rhsim06G0096600' => 'rsi', 'Rhsim06G0199100' => 'rsi', 'Rhsim12G0062300' => 'rsi', 'Rhsim12G0062800' => 'rsi', 'Sabra02G0118600' => 'sbr', 'Sabra04G0027300' => 'sbr', 'Sabra04G0119500' => 'sbr', 'Sabra08G0112500' => 'sbr', 'Sabra11G0036800' => 'sbr', 'Sabra11G0103800' => 'sbr', 'Sabra13G0096300' => 'sbr', 'Sabra16G0262300' => 'sbr', 'Sabra18G0091700' => 'sbr', 'Sabra19G0095400' => 'sbr', 'SalBow6G3080' => 'sbo', 'SalBow7G1157' => 'sbo', 'SalBow7G2123' => 'sbo', 'SalBow7G2285' => 'sbo', 'SalBow7G3537' => 'sbo', 'SalBow8G2947' => 'sbo', 'SalBow8G4463' => 'sbo', 'SalBow8G5466' => 'sbo', 'Sc01g0001750' => 'sci', 'Sc02g0006640' => 'sci', 'Sc02g0006670' => 'sci', 'Sc04g0008220' => 'sci', 'Sc05g0006190' => 'sci', 'Sc08g0002760' => 'sci', 'Sc17g0006170' => 'sci', 'Sc22g0002050' => 'sci', 'Sc23g0001190' => 'sci', 'Sc24g0000980' => 'sci', 'Sed0006245' => 'sed', 'Sed0007543' => 'sed', 'Sed0009411' => 'sed', 'Sed0010765' => 'sed', 'Sed0012944' => 'sed', 'Sed0014682' => 'sed', 'Sed0016174' => 'sed', 'Sed0016796' => 'sed', 'Sed0020317' => 'sed', 'Sed0021467' => 'sed', 'SEGI_01316' => 'sgi', 'SEGI_03374' => 'sgi', 'SEGI_16265' => 'sgi', 'SEGI_18569' => 'sgi', 'SEGI_20351' => 'sgi', 'SEGI_26395' => 'sgi', 'SEGI_29469' => 'sgi', 'SEGI_34771' => 'sgi', 'SEGI_36769' => 'sgi', 'SEGI_37139' => 'sgi', 'SGA_v2.0_scaffold100G29687' => 'sas', 'SGA_v2.0_scaffold118G32472' => 'sas', 'SGA_v2.0_scaffold14G07051' => 'sas', 'SGA_v2.0_scaffold183G39845' => 'sas', 'SGA_v2.0_scaffold1G00174' => 'sas', 'SGA_v2.0_scaffold22G09714' => 'sas', 'SGA_v2.0_scaffold333G48992' => 'sas', 'SGA_v2.0_scaffold46G17491' => 'sas', 'SGA_v2.0_scaffold49G18294' => 'sas', 'SGA_v2.0_scaffold63G21658' => 'sas', 'SHI01741' => 'shi', 'SHI05771' => 'shi', 'SHI18077' => 'shi', 'SHI20525' => 'shi', 'SHI20527' => 'shi', 'SHI20528' => 'shi', 'SMO172G0185' => 'smo', 'SMO198G0020' => 'smo', 'SMO351G0006' => 'smo', 'SMO356G0118' => 'smo', 'SMO358G0296' => 'smo', 'SMO367G0079' => 'smo', 'SMO367G1277' => 'smo', 'Solyc01g014220.3' => 'sly', 'Solyc01g111770.2' => 'sly', 'Solyc02g078180.3' => 'sly', 'Solyc03g006430.3' => 'sly', 'Solyc03g006456.1' => 'sly', 'Solyc03g079860.2' => 'sly', 'Solyc04g079770.3' => 'sly', 'Solyc05g007430.4' => 'sly', 'Solyc07g063150.3' => 'sly', 'Solyc08g016620.3' => 'sly', 'Solyc09g057590.3' => 'sly', 'Solyc09g057600.1' => 'sly', 'Solyc10g009050.3' => 'sly', 'Solyc11g017420.2' => 'sly', 'Sopen01g053810' => 'spe', 'Sopen02g023040' => 'spe', 'Sopen03g002440' => 'spe', 'Sopen04g033350' => 'spe', 'Sopen05g003310' => 'spe', 'Sopen07g004050' => 'spe', 'Sopen07g031340' => 'spe', 'Sopen08g006990' => 'spe', 'Sopen10g004830' => 'spe', 'Sopen11g009370' => 'spe', 'Sp1g24450' => 'spa', 'Sp1g29670' => 'spa', 'Sp1g39600' => 'spa', 'Sp2g11080' => 'spa', 'Sp2g13970' => 'spa', 'Sp4g16130' => 'spa', 'Sp6g13080' => 'spa', 'Sp7g37270' => 'spa', 'TAR371G0065' => 'tar', 'TAR376G0340' => 'tar', 'TAR376G0435' => 'tar', 'TAR381G0002' => 'tar', 'TAR381G1236' => 'tar', 'TAR624G0055' => 'tar', 'TAR624G0324' => 'tar', 'TAR624G0696' => 'tar', 'TAR624G0906' => 'tar', 'TAR625G0107' => 'tar', 'TAR626G0015' => 'tar', 'TAR626G1356' => 'tar', 'TAR627G0888' => 'tar', 'TAR628G0399' => 'tar', 'TAR628G1327' => 'tar', 'TAR629G2831' => 'tar', 'TAR629G2874' => 'tar', 'TAR633G1432' => 'tar', 'TAR633G2771' => 'tar', 'THA.LOC104803394' => 'tha', 'THA.LOC104805153' => 'tha', 'THA.LOC104806784' => 'tha', 'THA.LOC104810473' => 'tha', 'THA.LOC104813100' => 'tha', 'THA.LOC104814215' => 'tha', 'THA.LOC104815554' => 'tha', 'THA.LOC104820544' => 'tha', 'THA.LOC104824754' => 'tha', 'THA.LOC104827717' => 'tha', 'Thecc.02G031400' => 'tca', 'Thecc.02G055900' => 'tca', 'Thecc.02G350800' => 'tca', 'Thecc.06G150900' => 'tca', 'Thecc.06G186600' => 'tca', 'Thecc.07G089600' => 'tca', 'Thecc.08G020400' => 'tca', 'Thecc.08G182100' => 'tca', 'Thhalv10000873m.g' => 'esa', 'Thhalv10004185m.g' => 'esa', 'Thhalv10006981m.g' => 'esa', 'Thhalv10007204m.g' => 'esa', 'Thhalv10011374m.g' => 'esa', 'Thhalv10013482m.g' => 'esa', 'Thhalv10017801m.g' => 'esa', 'Thhalv10024983m.g' => 'esa', 'TPR.G12072' => 'tpr', 'TPR.G15769' => 'tpr', 'TPR.G16504' => 'tpr', 'TPR.G16506' => 'tpr', 'TPR.G24345' => 'tpr', 'TPR.G26666' => 'tpr', 'TPR.G27320' => 'tpr', 'TPR.G31819' => 'tpr', 'TPR.G38879' => 'tpr', 'TPR.G39015' => 'tpr', 'TPR.G8819' => 'tpr', 'TWI09G0924' => 'twi', 'TWI12G0811' => 'twi', 'TWI12G1294' => 'twi', 'TWI31G0150' => 'twi', 'TWI36G1262' => 'twi', 'TWI38G1287' => 'twi', 'TWI38G1633' => 'twi', 'TWI38G1982' => 'twi', 'TWI39G0116' => 'twi', 'TWI60G1011' => 'twi', 'TWI63G0171' => 'twi', 'TWI73G0839' => 'twi', 'TWI79G1511' => 'twi', 'unitig_0.g915' => 'ugi', 'unitig_0.g916' => 'ugi', 'unitig_21.g20219' => 'ugi', 'unitig_21.g20416' => 'ugi', 'unitig_578.g16132' => 'ugi', 'unitig_578.g16718' => 'ugi', 'unitig_62.g23481' => 'ugi', 'unitig_744.g24535' => 'ugi', 'unitig_749.g13525' => 'ugi', 'vmacro01248' => 'vma', 'vmacro02290' => 'vma', 'vmacro10946' => 'vma', 'vmacro11865' => 'vma', 'vmacro12493' => 'vma', 'vmacro17322' => 'vma', 'vmacro21599' => 'vma', 'vmacro23041' => 'vma', 'VMungo0251G0004' => 'vmu', 'VMungo0251G2639' => 'vmu', 'VMungo0251G2967' => 'vmu', 'VMungo0540G0864' => 'vmu', 'VMungo0540G1569' => 'vmu', 'VMungo0647G0317' => 'vmu', 'VMungo0720G1373' => 'vmu', 'VMungo0720G1508' => 'vmu', 'VMungo1080G0485' => 'vmu', 'VMungo1215G3177' => 'vmu', 'Zm00001eb112600' => 'zma', 'Zm00001eb120220' => 'zma', 'Zm00001eb153240' => 'zma', 'Zm00001eb168880' => 'zma', 'Zm00001eb213920' => 'zma', 'Zm00001eb228280' => 'zma', 'Zm00001eb254580' => 'zma', 'Zm00001eb272180' => 'zma', 'Zm00001eb293190' => 'zma', 'Zm00001eb322930' => 'zma', 'Zm00001eb353360' => 'zma', 'Zm00001eb353390' => 'zma', 'Zm00001eb353430' => 'zma', 'Zm00001eb353440' => 'zma', 'Zm00001eb353780' => 'zma' ) $gf_id = 'HOM05D000499' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000499' ) $data_identifier = 'HOM05D000499' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 29, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 12, 'amhyb' => (int) 8, 'aly' => (int) 12, 'aox' => (int) 9, 'arhy' => (int) 26, 'ath' => (int) 8, 'atr' => (int) 7, 'acertr' => (int) 10, 'cqu' => (int) 15, 'bca' => (int) 29, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 11, 'cansat' => (int) 8, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 9, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 8, 'cpa' => (int) 10, 'csa' => (int) 7, 'camsi' => (int) 20, 'dca' => (int) 8, 'din' => (int) 12, 'dzi' => (int) 14, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 6, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 38, 'gra' => (int) 16, 'vvi' => (int) 8, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 5, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 11, 'lja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 11, 'mpo' => (int) 3, 'mbi' => (int) 14, 'mdo' => (int) 14, 'mtr' => (int) 8, 'cme' => (int) 9, 'egut' => (int) 9, 'ama' => (int) 11, 'nta' => (int) 17, 'nnu' => (int) 11, 'oeu' => (int) 18, 'osa' => (int) 8, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 6, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 9, 'rsi' => (int) 9, 'sbr' => (int) 10, 'sbo' => (int) 8, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 10, 'sas' => (int) 10, 'shi' => (int) 6, 'smo' => (int) 7, 'sly' => (int) 14, 'spe' => (int) 10, 'spa' => (int) 8, 'tar' => (int) 19, 'tha' => (int) 10, 'tca' => (int) 8, 'esa' => (int) 8, 'tpr' => (int) 11, 'twi' => (int) 13, 'ugi' => (int) 9, 'vma' => (int) 8, 'vmu' => (int) 10, 'zma' => (int) 15 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb353780' $species_info = array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ) $local_species = 'ath' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000499', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1066', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p29780' => 'bna', 'A02p33180' => 'bna', 'A03p16470' => 'bna', 'A03p66010' => 'bna', 'A04p25970' => 'bna', 'A06p01270' => 'bna', 'A06p46080' => 'bna', 'A07p11400' => 'bna', 'A08p01840' => 'bna', 'A08p08230' => 'bna', 'A08p25740' => 'bna', 'A09p32070' => 'bna', 'A09p37830' => 'bna', 'A09p42840' => 'bna', 'A09p42850' => 'bna', 'Aa31LG10G2060' => 'aar', 'Aa31LG2G7410' => 'aar', 'Aa31LG6G10200' => 'aar', 'Aa31LG6G16680' => 'aar', 'Aa31LG6G8470' => 'aar', 'Aa31LG9G12730' => 'aar', 'Aa31LG9G13680' => 'aar', 'Aa31LG9G14920' => 'aar', 'Aa31LG9G6650' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4977' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5467' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3254' => 'aag', 'Actinidia02578' => 'ach', 'Actinidia07693' => 'ach', 'Actinidia08413' => 'ach', 'Actinidia08414' => 'ach', 'Actinidia15289' => 'ach', 'Actinidia19871' => 'ach', 'Actinidia21475' => 'ach', 'Actinidia22576' => 'ach', 'Actinidia28327' => 'ach', 'Actinidia32491' => 'ach', 'Actinidia39463' => 'ach', 'Actinidia39571' => 'ach', 'Ah.01g013750' => 'amhyb', 'Ah.01g023210' => 'amhyb', 'Ah.04g164850' => 'amhyb', 'Ah.05g178060' => 'amhyb', 'Ah.07g204270' => 'amhyb', 'Ah.07g208480' => 'amhyb', 'Ah.09g237410' => 'amhyb', 'Ah.14g089460' => 'amhyb', 'AL1G41790' => 'aly', 'AL1G49050' => 'aly', 'AL1G53810' => 'aly', 'AL1G61400' => 'aly', 'AL4G18580' => 'aly', 'AL5G12510' => 'aly', 'AL5G12540' => 'aly', 'AL6G43230' => 'aly', 'AL7G10370' => 'aly', 'AL7G19250' => 'aly', 'AL8G12240' => 'aly', 'AL8G18540' => 'aly', 'Aqoxy1G02409' => 'aox', 'Aqoxy2G03993' => 'aox', 'Aqoxy3G03357' => 'aox', 'Aqoxy4G00785' => 'aox', 'Aqoxy5G02598' => 'aox', 'Aqoxy6G00132' => 'aox', 'Aqoxy7G01776' => 'aox', 'Aqoxy7G02316' => 'aox', 'Aqoxy7G03973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.12AFKW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B8730' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27IQR1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3F75VG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3RE0GA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41TCQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.527VTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FIR39' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5W8UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DA38EV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ63HS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H1I32C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HC27T5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4M8AP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7N3CZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9UVDZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LS1NQA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT1D4B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SKC4TM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCFV76' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF9Q1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQWD9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1ZM88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WE07RT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YCK7VH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJE6Q6' => 'arhy', 'AT1G28240' => 'ath', 'AT1G34550' => 'ath', 'AT1G53040' => 'ath', 'AT2G02910' => 'ath', 'AT4G09630' => 'ath', 'AT4G38500' => 'ath', 'AT5G42660' => 'ath', 'AT5G46220' => 'ath', 'ATR0152G026' => 'atr', 'ATR0564G343' => 'atr', 'ATR0706G151' => 'atr', 'ATR0733G207' => 'atr', 'ATR0751G234' => 'atr', 'ATR0807G048' => 'atr', 'ATR1091G084' => 'atr', 'Atru.chr10.1229' => 'acertr', 'Atru.chr10.1230' => 'acertr', 'Atru.chr10.1874' => 'acertr', 'Atru.chr11.1808' => 'acertr', 'Atru.chr13.1795' => 'acertr', 'Atru.chr13.570' => 'acertr', 'Atru.chr2.2608' => 'acertr', 'Atru.chr2.2609' => 'acertr', 'Atru.chr5.3428' => 'acertr', 'Atru.chr8.1171' => 'acertr', 'AUR62004651' => 'cqu', 'AUR62008675' => 'cqu', 'AUR62010014' => 'cqu', 'AUR62013004' => 'cqu', 'AUR62014825' => 'cqu', 'AUR62015015' => 'cqu', 'AUR62015151' => 'cqu', 'AUR62017020' => 'cqu', 'AUR62019422' => 'cqu', 'AUR62023570' => 'cqu', 'AUR62025571' => 'cqu', 'AUR62029098' => 'cqu', 'AUR62033863' => 'cqu', 'AUR62034296' => 'cqu', 'AUR62040075' => 'cqu', 'BcaB02g07334' => 'bca', 'BcaB02g10575' => 'bca', 'BcaB03g12119' => 'bca', 'BcaB03g12120' => 'bca', 'BcaB03g13945' => 'bca', 'BcaB04g17123' => 'bca', 'BcaB04g17867' => 'bca', 'BcaB04g19839' => 'bca', 'BcaB07g30317' => 'bca', 'BcaB07g32432' => 'bca', 'BcaB07g33362' => 'bca', 'BcaB08g36611' => 'bca', 'BcaC01g00028' => 'bca', 'BcaC01g01356' => 'bca', 'BcaC01g02034' => 'bca', 'BcaC01g06051' => 'bca', 'BcaC03g16839' => 'bca', 'BcaC03g17176' => 'bca', 'BcaC05g26829' => 'bca', 'BcaC06g31490' => 'bca', 'BcaC06g35344' => 'bca', 'BcaC06g36570' => 'bca', 'BcaC07g37537' => 'bca', 'BcaC08g43491' => 'bca', 'BcaC08g43773' => 'bca', 'BcaNung00234' => 'bca', 'BcaNung01982' => 'bca', 'BcaNung03707' => 'bca', 'BcaNung06454' => 'bca', 'BolC2t10762H' => 'bol', 'BolC2t11191H' => 'bol', 'BolC3t14322H' => 'bol', 'BolC3t19747H' => 'bol', 'BolC3t21425H' => 'bol', 'BolC4t27800H' => 'bol', 'BolC5t31423H' => 'bol', 'BolC6t35951H' => 'bol', 'BolC6t36282H' => 'bol', 'BolC7t40678H' => 'bol', 'BolC7t40679H' => 'bol', 'BolC7t42222H' => 'bol', 'BolC7t43492H' => 'bol', 'BolC7t46785H' => 'bol', 'BolC8t47853H' => 'bol', 'BolC9t56805H' => 'bol', 'BraA02t08000Z' => 'bra', 'BraA02t08341Z' => 'bra', 'BraA03t10936Z' => 'bra', 'BraA03t15657Z' => 'bra', 'BraA04t18100Z' => 'bra', 'BraA05t20523Z' => 'bra', 'BraA06t23353Z' => 'bra', 'BraA06t27473Z' => 'bra', 'BraA06t27769Z' => 'bra', 'BraA07t28928Z' => 'bra', 'BraA08t32236Z' => 'bra', 'BraA08t32841Z' => 'bra', 'BraA08t34524Z' => 'bra', 'BraA09t38742Z' => 'bra', 'BraA09t39295Z' => 'bra', 'C02p47180' => 'bna', 'C02p50990' => 'bna', 'C03p19360' => 'bna', 'C03p74950' => 'bna', 'C03p91000' => 'bna', 'C04p63260' => 'bna', 'C05p27050' => 'bna', 'C06p08750' => 'bna', 'C06p11490' => 'bna', 'C07p02820' => 'bna', 'C07p17180' => 'bna', 'C07p29440' => 'bna', 'C07p63730' => 'bna', 'C09p39260' => 'bna', 'CAN.G1164.34' => 'can', 'CAN.G1164.39' => 'can', 'CAN.G1530.3' => 'can', 'CAN.G162.61' => 'can', 'CAN.G176.6' => 'can', 'CAN.G289.49' => 'can', 'CAN.G370.21' => 'can', 'CAN.G370.22' => 'can', 'CAN.G371.117' => 'can', 'CAN.G58.37' => 'can', 'CAN.G588.98' => 'can', 'CANSAT21G2266' => 'cansat', 'CANSAT25G2799' => 'cansat', 'CANSAT35G0862' => 'cansat', 'CANSAT35G1704' => 'cansat', 'CANSAT35G1760' => 'cansat', 'CANSAT56G3971' => 'cansat', 'CANSAT56G4116' => 'cansat', 'CANSAT80G1259' => 'cansat', 'CARHR027730' => 'chi', 'CARHR033880' => 'chi', 'CARHR043270' => 'chi', 'CARHR145330' => 'chi', 'CARHR145340' => 'chi', 'CARHR175570' => 'chi', 'CARHR181570' => 'chi', 'CARHR258470' => 'chi', 'CARHR260490' => 'chi', 'CARHR294220' => 'chi', 'Carub.0001s2668' => 'cru', 'Carub.0001s3257' => 'cru', 'Carub.0001s4220' => 'cru', 'Carub.0005s0179' => 'cru', 'Carub.0006s2807' => 'cru', 'Carub.0007s0039' => 'cru', 'Carub.0008s0169' => 'cru', 'Carub.0008s0636' => 'cru', 'Ca_00338_v3' => 'car', 'Ca_00542_v3' => 'car', 'Ca_01844_v3' => 'car', 'Ca_10611_v3' => 'car', 'Ca_13326_v3' => 'car', 'Ca_17944_v3' => 'car', 'Ca_18546_v3' => 'car', 'Ca_24219_v3' => 'car', 'Ca_29972_v3' => 'car', 'CBR_g3681' => 'cbr', 'CBR_g40021' => 'cbr', 'Cc01_g08140' => 'ccan', 'Cc02_g13410' => 'ccan', 'Cc02_g37480' => 'ccan', 'Cc05_g12030' => 'ccan', 'Cc09_g03370' => 'ccan', 'Cc09_g10300' => 'ccan', 'Cc10_g03530' => 'ccan', 'Cc10_g11380' => 'ccan', 'CDE01G0176' => 'cde', 'CDE02G0675' => 'cde', 'CDE02G0942' => 'cde', 'CDE02G1153' => 'cde', 'CDE02G4177' => 'cde', 'CDE04G2117' => 'cde', 'CDE04G2736' => 'cde', 'CDE08G1161' => 'cde', 'CDE09G1238' => 'cde', 'Cfa000467' => 'cfa', 'Cfa000947' => 'cfa', 'Cfa004969' => 'cfa', 'Cfa005284' => 'cfa', 'Cfa008993' => 'cfa', 'Cfa018187' => 'cfa', 'Cfa018454' => 'cfa', 'Cfa020585' => 'cfa', 'Ciclev10000424m.g' => 'ccl', 'Ciclev10003605m.g' => 'ccl', 'Ciclev10007828m.g' => 'ccl', 'Ciclev10014620m.g' => 'ccl', 'Ciclev10015169m.g' => 'ccl', 'Ciclev10018291m.g' => 'ccl', 'Ciclev10028256m.g' => 'ccl', 'Ciclev10033822m.g' => 'ccl', 'CiPaw.05G060300' => 'cil', 'CiPaw.05G085000' => 'cil', 'CiPaw.06G083700' => 'cil', 'CiPaw.06G120300' => 'cil', 'CiPaw.09G060500' => 'cil', 'CiPaw.09G123800' => 'cil', 'CiPaw.11G169700' => 'cil', 'CiPaw.12G118300' => 'cil', 'CiPaw.15G071000' => 'cil', 'CiPaw.15G081900' => 'cil', 'ClCG01G024610' => 'cla', 'ClCG03G006070' => 'cla', 'ClCG05G019250' => 'cla', 'ClCG09G009500' => 'cla', 'ClCG11G008200' => 'cla', 'ClCG11G018080' => 'cla', 'COL.COLO4_17373' => 'col', 'COL.COLO4_22994' => 'col', 'COL.COLO4_26389' => 'col', 'COL.COLO4_27170' => 'col', 'COL.COLO4_31074' => 'col', 'COL.COLO4_31465' => 'col', 'COL.COLO4_36438' => 'col', 'COL.COLO4_36439' => 'col', 'Cpa.g.c38781' => 'cpa', 'Cpa.g.sc128.12' => 'cpa', 'Cpa.g.sc166.7' => 'cpa', 'Cpa.g.sc166.8' => 'cpa', 'Cpa.g.sc20.111' => 'cpa', 'Cpa.g.sc27.31' => 'cpa', 'Cpa.g.sc64.36' => 'cpa', 'Cpa.g.sc64.37' => 'cpa', 'Cpa.g.sc66.49' => 'cpa', 'Cpa.g.sc80.64' => 'cpa', 'CsaV3_1G012320' => 'csa', 'CsaV3_2G008480' => 'csa', 'CsaV3_2G033450' => 'csa', 'CsaV3_3G044830' => 'csa', 'CsaV3_4G033710' => 'csa', 'CsaV3_6G051730' => 'csa', 'CsaV3_7G025350' => 'csa', 'CSS0001067' => 'camsi', 'CSS0005996' => 'camsi', 'CSS0006590' => 'camsi', 'CSS0009673' => 'camsi', 'CSS0010201' => 'camsi', 'CSS0010549' => 'camsi', 'CSS0011364' => 'camsi', 'CSS0014473' => 'camsi', 'CSS0014961' => 'camsi', 'CSS0020191' => 'camsi', 'CSS0021165' => 'camsi', 'CSS0022306' => 'camsi', 'CSS0030591' => 'camsi', 'CSS0030696' => 'camsi', 'CSS0032653' => 'camsi', 'CSS0037487' => 'camsi', 'CSS0041102' => 'camsi', 'CSS0041261' => 'camsi', 'CSS0046246' => 'camsi', 'CSS0049256' => 'camsi', 'DCAR_004075' => 'dca', 'DCAR_011538' => 'dca', 'DCAR_019553' => 'dca', 'DCAR_020952' => 'dca', 'DCAR_021739' => 'dca', 'DCAR_027407' => 'dca', 'DCAR_027913' => 'dca', 'DCAR_028066' => 'dca', 'Dinv05899' => 'din', 'Dinv07563' => 'din', 'Dinv08010' => 'din', 'Dinv14125' => 'din', 'Dinv20172' => 'din', 'Dinv30743' => 'din', 'Dinv31229' => 'din', 'Dinv34162' => 'din', 'Dinv36028' => 'din', 'Dinv39368' => 'din', 'Dinv40565' => 'din', 'Dinv41706' => 'din', 'Duzib052G0089' => 'dzi', 'Duzib116G0641' => 'dzi', 'Duzib132G0069' => 'dzi', 'Duzib132G1219' => 'dzi', 'Duzib147G0278' => 'dzi', 'Duzib160G0480' => 'dzi', 'Duzib170G0661' => 'dzi', 'Duzib177G0591' => 'dzi', 'Duzib187G1353' => 'dzi', 'Duzib192G0858' => 'dzi', 'Duzib192G0883' => 'dzi', 'Duzib213G0506' => 'dzi', 'Duzib235G0289' => 'dzi', 'Duzib251G0422' => 'dzi', 'ECA232G3898' => 'eca', 'ECA233G5950' => 'eca', 'ECA234G1699' => 'eca', 'ECA234G2421' => 'eca', 'ECA236G0426' => 'eca', 'ECA236G4331' => 'eca', 'ECA248G2573' => 'eca', 'EL10Ac1g00077' => 'bvu', 'EL10Ac1g01746' => 'bvu', 'EL10Ac2g03464' => 'bvu', 'EL10Ac4g08176' => 'bvu', 'EL10Ac7g17521' => 'bvu', 'EL10Ac8g20386' => 'bvu', 'EL10Ac9g21343' => 'bvu', 'EL10Ac9g22688' => 'bvu', 'Eucgr.B03434' => 'egr', 'Eucgr.D00618' => 'egr', 'Eucgr.E02395' => 'egr', 'Eucgr.F01129' => 'egr', 'Eucgr.F02622' => 'egr', 'Eucgr.F04207' => 'egr', 'FAN01G0570' => 'fan', 'FAN03G3351' => 'fan', 'FAN06G3702' => 'fan', 'FAN07G2149' => 'fan', 'FAN10G3758' => 'fan', 'FAN11G1170' => 'fan', 'FAN11G2050' => 'fan', 'FAN11G2724' => 'fan', 'FAN12G1700' => 'fan', 'FAN12G2028' => 'fan', 'FAN15G1160' => 'fan', 'FAN15G3063' => 'fan', 'FAN16G2540' => 'fan', 'FAN16G3077' => 'fan', 'FAN16G3624' => 'fan', 'FAN17G0221' => 'fan', 'FAN20G2492' => 'fan', 'FAN20G2905' => 'fan', 'FAN21G0548' => 'fan', 'FAN21G1300' => 'fan', 'FAN22G0077' => 'fan', 'FAN22G1315' => 'fan', 'FAN24G1280' => 'fan', 'FAN24G1445' => 'fan', 'FAN24G3527' => 'fan', 'FAN25G0464' => 'fan', 'FAN25G2885' => 'fan', 'FAN25G3270' => 'fan', 'FAN27G1101' => 'fan', 'FAN27G2846' => 'fan', 'FAN27G3524' => 'fan', 'FvH4_2g11770' => 'fve', 'FvH4_2g15630' => 'fve', 'FvH4_3g05570' => 'fve', 'FvH4_3g09110' => 'fve', 'FvH4_3g19940' => 'fve', 'FvH4_4g04821' => 'fve', 'FvH4_4g31480' => 'fve', 'FvH4_7g01740' => 'fve', 'Glyma.05G130400' => 'gma', 'Glyma.05G156400' => 'gma', 'Glyma.07G197000' => 'gma', 'Glyma.08G085151' => 'gma', 'Glyma.08G114500' => 'gma', 'Glyma.08G300400' => 'gma', 'Glyma.10G215800' => 'gma', 'Glyma.12G224400' => 'gma', 'Glyma.13G179300' => 'gma', 'Glyma.13G218151' => 'gma', 'Glyma.13G238800' => 'gma', 'Glyma.13G276900' => 'gma', 'Glyma.14G078200' => 'gma', 'Glyma.15G074500' => 'gma', 'Glyma.15G094100' => 'gma', 'Glyma.17G247200' => 'gma', 'Glyma.18G120100' => 'gma', 'Glyma.20G176000' => 'gma', 'Gohir.A01G063600' => 'ghi', 'Gohir.A01G170301' => 'ghi', 'Gohir.A02G060500' => 'ghi', 'Gohir.A05G133850' => 'ghi', 'Gohir.A05G161400' => 'ghi', 'Gohir.A06G012900' => 'ghi', 'Gohir.A06G035901' => 'ghi', 'Gohir.A06G127100' => 'ghi', 'Gohir.A06G210500' => 'ghi', 'Gohir.A08G008650' => 'ghi', 'Gohir.A09G072700' => 'ghi', 'Gohir.A09G088301' => 'ghi', 'Gohir.A10G040600' => 'ghi', 'Gohir.A12G036300' => 'ghi', 'Gohir.A12G143350' => 'ghi', 'Gohir.A12G165500' => 'ghi', 'Gohir.A13G145700' => 'ghi', 'Gohir.D01G050000' => 'ghi', 'Gohir.D01G051366' => 'ghi', 'Gohir.D01G161350' => 'ghi', 'Gohir.D02G065900' => 'ghi', 'Gohir.D05G164200' => 'ghi', 'Gohir.D05G355500' => 'ghi', 'Gohir.D06G010400' => 'ghi', 'Gohir.D06G111250' => 'ghi', 'Gohir.D06G132000' => 'ghi', 'Gohir.D06G210500' => 'ghi', 'Gohir.D07G165675' => 'ghi', 'Gohir.D08G062240' => 'ghi', 'Gohir.D08G086101' => 'ghi', 'Gohir.D08G138060' => 'ghi', 'Gohir.D09G072300' => 'ghi', 'Gohir.D10G041400' => 'ghi', 'Gohir.D11G191020' => 'ghi', 'Gohir.D11G212066' => 'ghi', 'Gohir.D12G036300' => 'ghi', 'Gohir.D12G168600' => 'ghi', 'Gohir.D13G150600' => 'ghi', 'Gorai.001G057300' => 'gra', 'Gorai.002G069900' => 'gra', 'Gorai.002G200000' => 'gra', 'Gorai.003G067600' => 'gra', 'Gorai.005G074800' => 'gra', 'Gorai.006G087300' => 'gra', 'Gorai.008G037500' => 'gra', 'Gorai.008G181400' => 'gra', 'Gorai.009G169400' => 'gra', 'Gorai.009G387900' => 'gra', 'Gorai.010G013300' => 'gra', 'Gorai.010G153800' => 'gra', 'Gorai.010G255800' => 'gra', 'Gorai.011G043700' => 'gra', 'Gorai.011G198900' => 'gra', 'Gorai.013G168400' => 'gra', 'GSVIVG01005212001' => 'vvi', 'GSVIVG01006163001' => 'vvi', 'GSVIVG01009625001' => 'vvi', 'GSVIVG01014338001' => 'vvi', 'GSVIVG01020005001' => 'vvi', 'GSVIVG01021450001' => 'vvi', 'GSVIVG01023975001' => 'vvi', 'GSVIVG01034490001' => 'vvi', 'HanXRQChr04g0112071' => 'han', 'HanXRQChr05g0131151' => 'han', 'HanXRQChr09g0262371' => 'han', 'HanXRQChr09g0268401' => 'han', 'HanXRQChr10g0279241' => 'han', 'HanXRQChr10g0297961' => 'han', 'HanXRQChr11g0326231' => 'han', 'HanXRQChr11g0328471' => 'han', 'HanXRQChr16g0507941' => 'han', 'HanXRQChr17g0560211' => 'han', 'Haze_02108' => 'cav', 'Haze_02428' => 'cav', 'Haze_05593' => 'cav', 'Haze_06448' => 'cav', 'Haze_09427' => 'cav', 'Haze_12022' => 'cav', 'Haze_17612' => 'cav', 'Haze_17928' => 'cav', 'Hma1.2p1_0032F.1_g019250' => 'hma', 'Hma1.2p1_0163F.1_g072690' => 'hma', 'Hma1.2p1_0265F.1_g106710' => 'hma', 'Hma1.2p1_0286F.1_g113970' => 'hma', 'Hma1.2p1_0363F.1_g136640' => 'hma', 'Hma1.2p1_0584F.1_g183470' => 'hma', 'Hma1.2p1_0885F.1_g232570' => 'hma', 'HPP92_006022' => 'vpl', 'HPP92_007320' => 'vpl', 'HPP92_011521' => 'vpl', 'HPP92_019387' => 'vpl', 'HPP92_024038' => 'vpl', 'Hund05891' => 'sun', 'Hund06450' => 'sun', 'Hund12053' => 'sun', 'Hund16800' => 'sun', 'Hund21222' => 'sun', 'Hund22896' => 'sun', 'Hund23746' => 'sun', 'Hund27083' => 'sun', 'Lalb_Chr02g0141831' => 'lal', 'Lalb_Chr02g0141841' => 'lal', 'Lalb_Chr05g0220411' => 'lal', 'Lalb_Chr06g0162081' => 'lal', 'Lalb_Chr09g0327651' => 'lal', 'Lalb_Chr13g0295051' => 'lal', 'Lalb_Chr15g0086801' => 'lal', 'Lalb_Chr16g0383781' => 'lal', 'Lalb_Chr16g0383791' => 'lal', 'Lalb_Chr18g0055441' => 'lal', 'Lalb_Chr18g0059611' => 'lal', 'Lalb_Chr20g0109661' => 'lal', 'Lalb_Chr20g0109831' => 'lal', 'Lalb_Chr20g0121871' => 'lal', 'Lalb_Chr22g0355361' => 'lal', 'Lalb_Chr25g0286371' => 'lal', 'Lj1A1187G43' => 'lonja', 'Lj1A1205T50' => 'lonja', 'Lj1A800G33' => 'lonja', 'Lj1C1187T7' => 'lonja', 'Lj1C843T11' => 'lonja', 'Lj1g0010940' => 'lja', 'Lj2A288T69' => 'lonja', 'Lj3g0024276' => 'lja', 'Lj4A47T76' => 'lonja', 'Lj4g0005805' => 'lja', 'Lj4g0006097' => 'lja', 'Lj4g0008528' => 'lja', 'Lj4g0024907' => 'lja', 'Lj5g0012472' => 'lja', 'Lj5g0018648' => 'lja', 'Lj6C789G1' => 'lonja', 'Lj6g0004000' => 'lja', 'Lj7A292G67' => 'lonja', 'Lj7A292T64' => 'lonja', 'Lj9A400T58' => 'lonja', 'Lsat_1_v5_gn_1_126181' => 'lsa', 'Lsat_1_v5_gn_4_123041' => 'lsa', 'Lsat_1_v5_gn_4_133620' => 'lsa', 'Lsat_1_v5_gn_4_53221' => 'lsa', 'Lsat_1_v5_gn_4_71961' => 'lsa', 'Lsat_1_v5_gn_7_105241' => 'lsa', 'Lsat_1_v5_gn_7_21361' => 'lsa', 'Lsat_1_v5_gn_7_28860' => 'lsa', 'Lsat_1_v5_gn_7_31260' => 'lsa', 'Lsat_1_v5_gn_8_52801' => 'lsa', 'Manes.02G191400' => 'mes', 'Manes.03G110100' => 'mes', 'Manes.04G071100' => 'mes', 'Manes.05G100500' => 'mes', 'Manes.05G164700' => 'mes', 'Manes.15G087000' => 'mes', 'Manes.15G121500' => 'mes', 'Manes.16G028300' => 'mes', 'Manes.17G046100' => 'mes', 'Manes.17G069800' => 'mes', 'Manes.18G100500' => 'mes', 'Mapoly0002s0109' => 'mpo', 'Mapoly0024s0007' => 'mpo', 'Mapoly0089s0032' => 'mpo', 'MBI04_g42241_MAGBIO' => 'mbi', 'MBI05_g11988_MAGBIO' => 'mbi', 'MBI05_g35452_MAGBIO' => 'mbi', 'MBI07_g30179_MAGBIO' => 'mbi', 'MBI07_g35859_MAGBIO' => 'mbi', 'MBI07_g35860_MAGBIO' => 'mbi', 'MBI07_g37166_MAGBIO' => 'mbi', 'MBI08_g18172_MAGBIO' => 'mbi', 'MBI09_g08441_MAGBIO' => 'mbi', 'MBI13_g01676_MAGBIO' => 'mbi', 'MBI14_g42955_MAGBIO' => 'mbi', 'MBI16_g13161_MAGBIO' => 'mbi', 'MBI17_g27204_MAGBIO' => 'mbi', 'MBI19_g21595_MAGBIO' => 'mbi', 'MD00G1148400' => 'mdo', 'MD02G1301200' => 'mdo', 'MD03G1227800' => 'mdo', 'MD05G1041100' => 'mdo', 'MD05G1124800' => 'mdo', 'MD05G1284000' => 'mdo', 'MD05G1338800' => 'mdo', 'MD05G1338900' => 'mdo', 'MD07G1022800' => 'mdo', 'MD10G1047500' => 'mdo', 'MD10G1127500' => 'mdo', 'MD10G1262300' => 'mdo', 'MD10G1293800' => 'mdo', 'MD16G1074300' => 'mdo', 'Medtr1g021670' => 'mtr', 'Medtr1g096320' => 'mtr', 'Medtr2g013690' => 'mtr', 'Medtr2g019450' => 'mtr', 'Medtr2g085170' => 'mtr', 'Medtr4g088785' => 'mtr', 'Medtr8g055930' => 'mtr', 'Medtr8g085850' => 'mtr', 'MELO3C002605.2' => 'cme', 'MELO3C003891.2' => 'cme', 'MELO3C004012.2' => 'cme', 'MELO3C007134.2' => 'cme', 'MELO3C008118.2' => 'cme', 'MELO3C016700.2' => 'cme', 'MELO3C024127.2' => 'cme', 'MELO3C033361.2' => 'cme', 'MELO3C033362.2' => 'cme', 'Migut.C00430' => 'egut', 'Migut.C01246' => 'egut', 'Migut.E00101' => 'egut', 'Migut.H01486' => 'egut', 'Migut.H01939' => 'egut', 'Migut.K00360' => 'egut', 'Migut.M00910' => 'egut', 'Migut.M01139' => 'egut', 'Migut.N02677' => 'egut', 'MSTRG.13252' => 'ama', 'MSTRG.14701' => 'ama', 'MSTRG.1521' => 'ama', 'MSTRG.15884' => 'ama', 'MSTRG.16242' => 'ama', 'MSTRG.22285' => 'ama', 'MSTRG.22444' => 'ama', 'MSTRG.2349' => 'ama', 'MSTRG.26308' => 'ama', 'MSTRG.28296' => 'ama', 'MSTRG.9895' => 'ama', 'Nitab4.5_0000110g0060' => 'nta', 'Nitab4.5_0000420g0130' => 'nta', 'Nitab4.5_0000422g0030' => 'nta', 'Nitab4.5_0000560g0180' => 'nta', 'Nitab4.5_0000703g0100' => 'nta', 'Nitab4.5_0000786g0200' => 'nta', 'Nitab4.5_0001336g0020' => 'nta', 'Nitab4.5_0001796g0030' => 'nta', 'Nitab4.5_0003348g0060' => 'nta', 'Nitab4.5_0003698g0040' => 'nta', 'Nitab4.5_0003942g0090' => 'nta', 'Nitab4.5_0004775g0070' => 'nta', 'Nitab4.5_0004864g0030' => 'nta', 'Nitab4.5_0005615g0020' => 'nta', 'Nitab4.5_0009288g0030' => 'nta', 'Nitab4.5_0009341g0010' => 'nta', 'Nitab4.5_0009535g0010' => 'nta', 'Nn1g03995' => 'nnu', 'Nn1g04100' => 'nnu', 'Nn1g06530' => 'nnu', 'Nn3g16404' => 'nnu', 'Nn3g17212' => 'nnu', 'Nn3g20776' => 'nnu', 'Nn3g21923' => 'nnu', 'Nn5g27737' => 'nnu', 'Nn5g29461' => 'nnu', 'Nn7g38355' => 'nnu', 'Nn8g39873' => 'nnu', 'Oeu000548.2' => 'oeu', 'Oeu004672.1' => 'oeu', 'Oeu015605.2' => 'oeu', 'Oeu016092.1' => 'oeu', 'Oeu017879.3' => 'oeu', 'Oeu024910.1' => 'oeu', 'Oeu028965.1' => 'oeu', 'Oeu031269.1' => 'oeu', 'Oeu031270.1' => 'oeu', 'Oeu032535.1' => 'oeu', 'Oeu034151.1' => 'oeu', 'Oeu034152.1' => 'oeu', 'Oeu034588.2' => 'oeu', 'Oeu050846.1' => 'oeu', 'Oeu050849.2' => 'oeu', 'Oeu051063.2' => 'oeu', 'Oeu052368.1' => 'oeu', 'Oeu052370.1' => 'oeu', 'Os01g0210400' => 'osa', 'Os01g0304300' => 'osa', 'Os01g0749100' => 'osa', 'Os02g0745800' => 'osa', 'Os03g0769050' => 'osa', 'Os05g0531500' => 'osa', 'Os06g0724300' => 'osa', 'Os11g0198100' => 'osa', 'Peaxi162Scf00069g01425' => 'pax', 'Peaxi162Scf00280g00811' => 'pax', 'Peaxi162Scf00310g00615' => 'pax', 'Peaxi162Scf00362g00542' => 'pax', 'Peaxi162Scf00461g00310' => 'pax', 'Peaxi162Scf00530g00118' => 'pax', 'Peaxi162Scf00541g00057' => 'pax', 'Peaxi162Scf00661g00017' => 'pax', 'Peaxi162Scf00926g00027' => 'pax', 'Peaxi162Scf01064g00263' => 'pax', 'Peaxi162Scf01211g00135' => 'pax', 'PGR004G2336' => 'pgr', 'PGR042G0327' => 'pgr', 'PGR042G1957' => 'pgr', 'PGR042G2003' => 'pgr', 'PGR042G3929' => 'pgr', 'PGR083G1137' => 'pgr', 'PGR083G1364' => 'pgr', 'PGSC0003DMG400003381' => 'stu', 'PGSC0003DMG400003417' => 'stu', 'PGSC0003DMG400008981' => 'stu', 'PGSC0003DMG400012417' => 'stu', 'PGSC0003DMG400012823' => 'stu', 'PGSC0003DMG400016885' => 'stu', 'PGSC0003DMG400022812' => 'stu', 'PGSC0003DMG400029726' => 'stu', 'PGSC0003DMG401009243' => 'stu', 'PGSC0003DMG401031505' => 'stu', 'PGSC0003DMG402031505' => 'stu', 'Phvul.001G017600' => 'pvu', 'Phvul.002G193500' => 'pvu', 'Phvul.002G228900' => 'pvu', 'Phvul.002G236800' => 'pvu', 'Phvul.003G049500' => 'pvu', 'Phvul.005G072000' => 'pvu', 'Phvul.006G164800' => 'pvu', 'Phvul.006G185100' => 'pvu', 'Phvul.007G090000' => 'pvu', 'Potri.001G399800' => 'ptr', 'Potri.002G149900' => 'ptr', 'Potri.004G044100' => 'ptr', 'Potri.004G177600' => 'ptr', 'Potri.009G138000' => 'ptr', 'Potri.010G094000' => 'ptr', 'Potri.011G053000' => 'ptr', 'Potri.011G119300' => 'ptr', 'Potri.013G113700' => 'ptr', 'Potri.018G107800' => 'ptr', 'Potri.019G084100' => 'ptr', 'Pp3c14_23720' => 'ppa', 'Pp3c16_6340' => 'ppa', 'Pp3c23_13420' => 'ppa', 'Pp3c24_2740' => 'ppa', 'Pp3c25_860' => 'ppa', 'Pp3c8_21750' => 'ppa', 'Prupe.1G273000' => 'ppe', 'Prupe.1G273700' => 'ppe', 'Prupe.1G274100' => 'ppe', 'Prupe.2G023300' => 'ppe', 'Prupe.4G048000' => 'ppe', 'Prupe.4G080400' => 'ppe', 'Prupe.4G181200' => 'ppe', 'Prupe.8G056900' => 'ppe', 'Prupe.8G168700' => 'ppe', 'Psat1g189080' => 'psa', 'Psat1g204760' => 'psa', 'Psat4g175560' => 'psa', 'Psat4g177720' => 'psa', 'Psat5g244240' => 'psa', 'Psat6g010720' => 'psa', 'Psat6g187200' => 'psa', 'Psat7g072040' => 'psa', 'PSO017G3501' => 'pso', 'PSO063G2148' => 'pso', 'PSO063G5608' => 'pso', 'PSO210G6392' => 'pso', 'PSO541G2319' => 'pso', 'PSO541G2836' => 'pso', 'PSO541G4012' => 'pso', 'PSO541G6253' => 'pso', 'PSO675G0580' => 'pso', 'PSO675G0856' => 'pso', 'PSO675G5635' => 'pso', 'PSO675G9157' => 'pso', 'PSO832G1660' => 'pso', 'PSO832G1969' => 'pso', 'QL02p007186' => 'qlo', 'QL02p033904' => 'qlo', 'QL03p064391' => 'qlo', 'QL05p040593' => 'qlo', 'QL05p058242' => 'qlo', 'QL08p021825' => 'qlo', 'QL11p004981' => 'qlo', 'RcHm_v2.0_Chr1g0318301' => 'rch', 'RcHm_v2.0_Chr4g0418501' => 'rch', 'RcHm_v2.0_Chr4g0439971' => 'rch', 'RcHm_v2.0_Chr5g0008541' => 'rch', 'RcHm_v2.0_Chr5g0014101' => 'rch', 'RcHm_v2.0_Chr5g0014131' => 'rch', 'RcHm_v2.0_Chr5g0033621' => 'rch', 'RcHm_v2.0_Chr6g0272041' => 'rch', 'RcHm_v2.0_Chr6g0278831' => 'rch', 'Rhsim02G0130400' => 'rsi', 'Rhsim02G0171100' => 'rsi', 'Rhsim05G0053000' => 'rsi', 'Rhsim05G0053100' => 'rsi', 'Rhsim06G0096500' => 'rsi', 'Rhsim06G0096600' => 'rsi', 'Rhsim06G0199100' => 'rsi', 'Rhsim12G0062300' => 'rsi', 'Rhsim12G0062800' => 'rsi', 'Sabra02G0118600' => 'sbr', 'Sabra04G0027300' => 'sbr', 'Sabra04G0119500' => 'sbr', 'Sabra08G0112500' => 'sbr', 'Sabra11G0036800' => 'sbr', 'Sabra11G0103800' => 'sbr', 'Sabra13G0096300' => 'sbr', 'Sabra16G0262300' => 'sbr', 'Sabra18G0091700' => 'sbr', 'Sabra19G0095400' => 'sbr', 'SalBow6G3080' => 'sbo', 'SalBow7G1157' => 'sbo', 'SalBow7G2123' => 'sbo', 'SalBow7G2285' => 'sbo', 'SalBow7G3537' => 'sbo', 'SalBow8G2947' => 'sbo', 'SalBow8G4463' => 'sbo', 'SalBow8G5466' => 'sbo', 'Sc01g0001750' => 'sci', 'Sc02g0006640' => 'sci', 'Sc02g0006670' => 'sci', 'Sc04g0008220' => 'sci', 'Sc05g0006190' => 'sci', 'Sc08g0002760' => 'sci', 'Sc17g0006170' => 'sci', 'Sc22g0002050' => 'sci', 'Sc23g0001190' => 'sci', 'Sc24g0000980' => 'sci', 'Sed0006245' => 'sed', 'Sed0007543' => 'sed', 'Sed0009411' => 'sed', 'Sed0010765' => 'sed', 'Sed0012944' => 'sed', 'Sed0014682' => 'sed', 'Sed0016174' => 'sed', 'Sed0016796' => 'sed', 'Sed0020317' => 'sed', 'Sed0021467' => 'sed', 'SEGI_01316' => 'sgi', 'SEGI_03374' => 'sgi', 'SEGI_16265' => 'sgi', 'SEGI_18569' => 'sgi', 'SEGI_20351' => 'sgi', 'SEGI_26395' => 'sgi', 'SEGI_29469' => 'sgi', 'SEGI_34771' => 'sgi', 'SEGI_36769' => 'sgi', 'SEGI_37139' => 'sgi', 'SGA_v2.0_scaffold100G29687' => 'sas', 'SGA_v2.0_scaffold118G32472' => 'sas', 'SGA_v2.0_scaffold14G07051' => 'sas', 'SGA_v2.0_scaffold183G39845' => 'sas', 'SGA_v2.0_scaffold1G00174' => 'sas', 'SGA_v2.0_scaffold22G09714' => 'sas', 'SGA_v2.0_scaffold333G48992' => 'sas', 'SGA_v2.0_scaffold46G17491' => 'sas', 'SGA_v2.0_scaffold49G18294' => 'sas', 'SGA_v2.0_scaffold63G21658' => 'sas', 'SHI01741' => 'shi', 'SHI05771' => 'shi', 'SHI18077' => 'shi', 'SHI20525' => 'shi', 'SHI20527' => 'shi', 'SHI20528' => 'shi', 'SMO172G0185' => 'smo', 'SMO198G0020' => 'smo', 'SMO351G0006' => 'smo', 'SMO356G0118' => 'smo', 'SMO358G0296' => 'smo', 'SMO367G0079' => 'smo', 'SMO367G1277' => 'smo', 'Solyc01g014220.3' => 'sly', 'Solyc01g111770.2' => 'sly', 'Solyc02g078180.3' => 'sly', 'Solyc03g006430.3' => 'sly', 'Solyc03g006456.1' => 'sly', 'Solyc03g079860.2' => 'sly', 'Solyc04g079770.3' => 'sly', 'Solyc05g007430.4' => 'sly', 'Solyc07g063150.3' => 'sly', 'Solyc08g016620.3' => 'sly', 'Solyc09g057590.3' => 'sly', 'Solyc09g057600.1' => 'sly', 'Solyc10g009050.3' => 'sly', 'Solyc11g017420.2' => 'sly', 'Sopen01g053810' => 'spe', 'Sopen02g023040' => 'spe', 'Sopen03g002440' => 'spe', 'Sopen04g033350' => 'spe', 'Sopen05g003310' => 'spe', 'Sopen07g004050' => 'spe', 'Sopen07g031340' => 'spe', 'Sopen08g006990' => 'spe', 'Sopen10g004830' => 'spe', 'Sopen11g009370' => 'spe', 'Sp1g24450' => 'spa', 'Sp1g29670' => 'spa', 'Sp1g39600' => 'spa', 'Sp2g11080' => 'spa', 'Sp2g13970' => 'spa', 'Sp4g16130' => 'spa', 'Sp6g13080' => 'spa', 'Sp7g37270' => 'spa', 'TAR371G0065' => 'tar', 'TAR376G0340' => 'tar', 'TAR376G0435' => 'tar', 'TAR381G0002' => 'tar', 'TAR381G1236' => 'tar', 'TAR624G0055' => 'tar', 'TAR624G0324' => 'tar', 'TAR624G0696' => 'tar', 'TAR624G0906' => 'tar', 'TAR625G0107' => 'tar', 'TAR626G0015' => 'tar', 'TAR626G1356' => 'tar', 'TAR627G0888' => 'tar', 'TAR628G0399' => 'tar', 'TAR628G1327' => 'tar', 'TAR629G2831' => 'tar', 'TAR629G2874' => 'tar', 'TAR633G1432' => 'tar', 'TAR633G2771' => 'tar', 'THA.LOC104803394' => 'tha', 'THA.LOC104805153' => 'tha', 'THA.LOC104806784' => 'tha', 'THA.LOC104810473' => 'tha', 'THA.LOC104813100' => 'tha', 'THA.LOC104814215' => 'tha', 'THA.LOC104815554' => 'tha', 'THA.LOC104820544' => 'tha', 'THA.LOC104824754' => 'tha', 'THA.LOC104827717' => 'tha', 'Thecc.02G031400' => 'tca', 'Thecc.02G055900' => 'tca', 'Thecc.02G350800' => 'tca', 'Thecc.06G150900' => 'tca', 'Thecc.06G186600' => 'tca', 'Thecc.07G089600' => 'tca', 'Thecc.08G020400' => 'tca', 'Thecc.08G182100' => 'tca', 'Thhalv10000873m.g' => 'esa', 'Thhalv10004185m.g' => 'esa', 'Thhalv10006981m.g' => 'esa', 'Thhalv10007204m.g' => 'esa', 'Thhalv10011374m.g' => 'esa', 'Thhalv10013482m.g' => 'esa', 'Thhalv10017801m.g' => 'esa', 'Thhalv10024983m.g' => 'esa', 'TPR.G12072' => 'tpr', 'TPR.G15769' => 'tpr', 'TPR.G16504' => 'tpr', 'TPR.G16506' => 'tpr', 'TPR.G24345' => 'tpr', 'TPR.G26666' => 'tpr', 'TPR.G27320' => 'tpr', 'TPR.G31819' => 'tpr', 'TPR.G38879' => 'tpr', 'TPR.G39015' => 'tpr', 'TPR.G8819' => 'tpr', 'TWI09G0924' => 'twi', 'TWI12G0811' => 'twi', 'TWI12G1294' => 'twi', 'TWI31G0150' => 'twi', 'TWI36G1262' => 'twi', 'TWI38G1287' => 'twi', 'TWI38G1633' => 'twi', 'TWI38G1982' => 'twi', 'TWI39G0116' => 'twi', 'TWI60G1011' => 'twi', 'TWI63G0171' => 'twi', 'TWI73G0839' => 'twi', 'TWI79G1511' => 'twi', 'unitig_0.g915' => 'ugi', 'unitig_0.g916' => 'ugi', 'unitig_21.g20219' => 'ugi', 'unitig_21.g20416' => 'ugi', 'unitig_578.g16132' => 'ugi', 'unitig_578.g16718' => 'ugi', 'unitig_62.g23481' => 'ugi', 'unitig_744.g24535' => 'ugi', 'unitig_749.g13525' => 'ugi', 'vmacro01248' => 'vma', 'vmacro02290' => 'vma', 'vmacro10946' => 'vma', 'vmacro11865' => 'vma', 'vmacro12493' => 'vma', 'vmacro17322' => 'vma', 'vmacro21599' => 'vma', 'vmacro23041' => 'vma', 'VMungo0251G0004' => 'vmu', 'VMungo0251G2639' => 'vmu', 'VMungo0251G2967' => 'vmu', 'VMungo0540G0864' => 'vmu', 'VMungo0540G1569' => 'vmu', 'VMungo0647G0317' => 'vmu', 'VMungo0720G1373' => 'vmu', 'VMungo0720G1508' => 'vmu', 'VMungo1080G0485' => 'vmu', 'VMungo1215G3177' => 'vmu', 'Zm00001eb112600' => 'zma', 'Zm00001eb120220' => 'zma', 'Zm00001eb153240' => 'zma', 'Zm00001eb168880' => 'zma', 'Zm00001eb213920' => 'zma', 'Zm00001eb228280' => 'zma', 'Zm00001eb254580' => 'zma', 'Zm00001eb272180' => 'zma', 'Zm00001eb293190' => 'zma', 'Zm00001eb322930' => 'zma', 'Zm00001eb353360' => 'zma', 'Zm00001eb353390' => 'zma', 'Zm00001eb353430' => 'zma', 'Zm00001eb353440' => 'zma', 'Zm00001eb353780' => 'zma' ), 'gf_id' => 'HOM05D000499', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000499' ), 'data_identifier' => 'HOM05D000499', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000499', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1066', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p29780' => 'bna', 'A02p33180' => 'bna', 'A03p16470' => 'bna', 'A03p66010' => 'bna', 'A04p25970' => 'bna', 'A06p01270' => 'bna', 'A06p46080' => 'bna', 'A07p11400' => 'bna', 'A08p01840' => 'bna', 'A08p08230' => 'bna', 'A08p25740' => 'bna', 'A09p32070' => 'bna', 'A09p37830' => 'bna', 'A09p42840' => 'bna', 'A09p42850' => 'bna', 'Aa31LG10G2060' => 'aar', 'Aa31LG2G7410' => 'aar', 'Aa31LG6G10200' => 'aar', 'Aa31LG6G16680' => 'aar', 'Aa31LG6G8470' => 'aar', 'Aa31LG9G12730' => 'aar', 'Aa31LG9G13680' => 'aar', 'Aa31LG9G14920' => 'aar', 'Aa31LG9G6650' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4977' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5467' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3254' => 'aag', 'Actinidia02578' => 'ach', 'Actinidia07693' => 'ach', 'Actinidia08413' => 'ach', 'Actinidia08414' => 'ach', 'Actinidia15289' => 'ach', 'Actinidia19871' => 'ach', 'Actinidia21475' => 'ach', 'Actinidia22576' => 'ach', 'Actinidia28327' => 'ach', 'Actinidia32491' => 'ach', 'Actinidia39463' => 'ach', 'Actinidia39571' => 'ach', 'Ah.01g013750' => 'amhyb', 'Ah.01g023210' => 'amhyb', 'Ah.04g164850' => 'amhyb', 'Ah.05g178060' => 'amhyb', 'Ah.07g204270' => 'amhyb', 'Ah.07g208480' => 'amhyb', 'Ah.09g237410' => 'amhyb', 'Ah.14g089460' => 'amhyb', 'AL1G41790' => 'aly', 'AL1G49050' => 'aly', 'AL1G53810' => 'aly', 'AL1G61400' => 'aly', 'AL4G18580' => 'aly', 'AL5G12510' => 'aly', 'AL5G12540' => 'aly', 'AL6G43230' => 'aly', 'AL7G10370' => 'aly', 'AL7G19250' => 'aly', 'AL8G12240' => 'aly', 'AL8G18540' => 'aly', 'Aqoxy1G02409' => 'aox', 'Aqoxy2G03993' => 'aox', 'Aqoxy3G03357' => 'aox', 'Aqoxy4G00785' => 'aox', 'Aqoxy5G02598' => 'aox', 'Aqoxy6G00132' => 'aox', 'Aqoxy7G01776' => 'aox', 'Aqoxy7G02316' => 'aox', 'Aqoxy7G03973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.12AFKW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B8730' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27IQR1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3F75VG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3RE0GA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41TCQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.527VTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FIR39' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5W8UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DA38EV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ63HS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H1I32C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HC27T5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4M8AP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7N3CZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9UVDZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LS1NQA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT1D4B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SKC4TM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCFV76' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF9Q1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQWD9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1ZM88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WE07RT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YCK7VH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJE6Q6' => 'arhy', 'AT1G28240' => 'ath', 'AT1G34550' => 'ath', 'AT1G53040' => 'ath', 'AT2G02910' => 'ath', 'AT4G09630' => 'ath', 'AT4G38500' => 'ath', 'AT5G42660' => 'ath', 'AT5G46220' => 'ath', 'ATR0152G026' => 'atr', 'ATR0564G343' => 'atr', 'ATR0706G151' => 'atr', 'ATR0733G207' => 'atr', 'ATR0751G234' => 'atr', 'ATR0807G048' => 'atr', 'ATR1091G084' => 'atr', 'Atru.chr10.1229' => 'acertr', 'Atru.chr10.1230' => 'acertr', 'Atru.chr10.1874' => 'acertr', 'Atru.chr11.1808' => 'acertr', 'Atru.chr13.1795' => 'acertr', 'Atru.chr13.570' => 'acertr', 'Atru.chr2.2608' => 'acertr', 'Atru.chr2.2609' => 'acertr', 'Atru.chr5.3428' => 'acertr', 'Atru.chr8.1171' => 'acertr', 'AUR62004651' => 'cqu', 'AUR62008675' => 'cqu', 'AUR62010014' => 'cqu', 'AUR62013004' => 'cqu', 'AUR62014825' => 'cqu', 'AUR62015015' => 'cqu', 'AUR62015151' => 'cqu', 'AUR62017020' => 'cqu', 'AUR62019422' => 'cqu', 'AUR62023570' => 'cqu', 'AUR62025571' => 'cqu', 'AUR62029098' => 'cqu', 'AUR62033863' => 'cqu', 'AUR62034296' => 'cqu', 'AUR62040075' => 'cqu', 'BcaB02g07334' => 'bca', 'BcaB02g10575' => 'bca', 'BcaB03g12119' => 'bca', 'BcaB03g12120' => 'bca', 'BcaB03g13945' => 'bca', 'BcaB04g17123' => 'bca', 'BcaB04g17867' => 'bca', 'BcaB04g19839' => 'bca', 'BcaB07g30317' => 'bca', 'BcaB07g32432' => 'bca', 'BcaB07g33362' => 'bca', 'BcaB08g36611' => 'bca', 'BcaC01g00028' => 'bca', 'BcaC01g01356' => 'bca', 'BcaC01g02034' => 'bca', 'BcaC01g06051' => 'bca', 'BcaC03g16839' => 'bca', 'BcaC03g17176' => 'bca', 'BcaC05g26829' => 'bca', 'BcaC06g31490' => 'bca', 'BcaC06g35344' => 'bca', 'BcaC06g36570' => 'bca', 'BcaC07g37537' => 'bca', 'BcaC08g43491' => 'bca', 'BcaC08g43773' => 'bca', 'BcaNung00234' => 'bca', 'BcaNung01982' => 'bca', 'BcaNung03707' => 'bca', 'BcaNung06454' => 'bca', 'BolC2t10762H' => 'bol', 'BolC2t11191H' => 'bol', 'BolC3t14322H' => 'bol', 'BolC3t19747H' => 'bol', 'BolC3t21425H' => 'bol', 'BolC4t27800H' => 'bol', 'BolC5t31423H' => 'bol', 'BolC6t35951H' => 'bol', 'BolC6t36282H' => 'bol', 'BolC7t40678H' => 'bol', 'BolC7t40679H' => 'bol', 'BolC7t42222H' => 'bol', 'BolC7t43492H' => 'bol', 'BolC7t46785H' => 'bol', 'BolC8t47853H' => 'bol', 'BolC9t56805H' => 'bol', 'BraA02t08000Z' => 'bra', 'BraA02t08341Z' => 'bra', 'BraA03t10936Z' => 'bra', 'BraA03t15657Z' => 'bra', 'BraA04t18100Z' => 'bra', 'BraA05t20523Z' => 'bra', 'BraA06t23353Z' => 'bra', 'BraA06t27473Z' => 'bra', 'BraA06t27769Z' => 'bra', 'BraA07t28928Z' => 'bra', 'BraA08t32236Z' => 'bra', 'BraA08t32841Z' => 'bra', 'BraA08t34524Z' => 'bra', 'BraA09t38742Z' => 'bra', 'BraA09t39295Z' => 'bra', 'C02p47180' => 'bna', 'C02p50990' => 'bna', 'C03p19360' => 'bna', 'C03p74950' => 'bna', 'C03p91000' => 'bna', 'C04p63260' => 'bna', 'C05p27050' => 'bna', 'C06p08750' => 'bna', 'C06p11490' => 'bna', 'C07p02820' => 'bna', 'C07p17180' => 'bna', 'C07p29440' => 'bna', 'C07p63730' => 'bna', 'C09p39260' => 'bna', 'CAN.G1164.34' => 'can', 'CAN.G1164.39' => 'can', 'CAN.G1530.3' => 'can', 'CAN.G162.61' => 'can', 'CAN.G176.6' => 'can', 'CAN.G289.49' => 'can', 'CAN.G370.21' => 'can', 'CAN.G370.22' => 'can', 'CAN.G371.117' => 'can', 'CAN.G58.37' => 'can', 'CAN.G588.98' => 'can', 'CANSAT21G2266' => 'cansat', 'CANSAT25G2799' => 'cansat', 'CANSAT35G0862' => 'cansat', 'CANSAT35G1704' => 'cansat', 'CANSAT35G1760' => 'cansat', 'CANSAT56G3971' => 'cansat', 'CANSAT56G4116' => 'cansat', 'CANSAT80G1259' => 'cansat', 'CARHR027730' => 'chi', 'CARHR033880' => 'chi', 'CARHR043270' => 'chi', 'CARHR145330' => 'chi', 'CARHR145340' => 'chi', 'CARHR175570' => 'chi', 'CARHR181570' => 'chi', 'CARHR258470' => 'chi', 'CARHR260490' => 'chi', 'CARHR294220' => 'chi', 'Carub.0001s2668' => 'cru', 'Carub.0001s3257' => 'cru', 'Carub.0001s4220' => 'cru', 'Carub.0005s0179' => 'cru', 'Carub.0006s2807' => 'cru', 'Carub.0007s0039' => 'cru', 'Carub.0008s0169' => 'cru', 'Carub.0008s0636' => 'cru', 'Ca_00338_v3' => 'car', 'Ca_00542_v3' => 'car', 'Ca_01844_v3' => 'car', 'Ca_10611_v3' => 'car', 'Ca_13326_v3' => 'car', 'Ca_17944_v3' => 'car', 'Ca_18546_v3' => 'car', 'Ca_24219_v3' => 'car', 'Ca_29972_v3' => 'car', 'CBR_g3681' => 'cbr', 'CBR_g40021' => 'cbr', 'Cc01_g08140' => 'ccan', 'Cc02_g13410' => 'ccan', 'Cc02_g37480' => 'ccan', 'Cc05_g12030' => 'ccan', 'Cc09_g03370' => 'ccan', 'Cc09_g10300' => 'ccan', 'Cc10_g03530' => 'ccan', 'Cc10_g11380' => 'ccan', 'CDE01G0176' => 'cde', 'CDE02G0675' => 'cde', 'CDE02G0942' => 'cde', 'CDE02G1153' => 'cde', 'CDE02G4177' => 'cde', 'CDE04G2117' => 'cde', 'CDE04G2736' => 'cde', 'CDE08G1161' => 'cde', 'CDE09G1238' => 'cde', 'Cfa000467' => 'cfa', 'Cfa000947' => 'cfa', 'Cfa004969' => 'cfa', 'Cfa005284' => 'cfa', 'Cfa008993' => 'cfa', 'Cfa018187' => 'cfa', 'Cfa018454' => 'cfa', 'Cfa020585' => 'cfa', 'Ciclev10000424m.g' => 'ccl', 'Ciclev10003605m.g' => 'ccl', 'Ciclev10007828m.g' => 'ccl', 'Ciclev10014620m.g' => 'ccl', 'Ciclev10015169m.g' => 'ccl', 'Ciclev10018291m.g' => 'ccl', 'Ciclev10028256m.g' => 'ccl', 'Ciclev10033822m.g' => 'ccl', 'CiPaw.05G060300' => 'cil', 'CiPaw.05G085000' => 'cil', 'CiPaw.06G083700' => 'cil', 'CiPaw.06G120300' => 'cil', 'CiPaw.09G060500' => 'cil', 'CiPaw.09G123800' => 'cil', 'CiPaw.11G169700' => 'cil', 'CiPaw.12G118300' => 'cil', 'CiPaw.15G071000' => 'cil', 'CiPaw.15G081900' => 'cil', 'ClCG01G024610' => 'cla', 'ClCG03G006070' => 'cla', 'ClCG05G019250' => 'cla', 'ClCG09G009500' => 'cla', 'ClCG11G008200' => 'cla', 'ClCG11G018080' => 'cla', 'COL.COLO4_17373' => 'col', 'COL.COLO4_22994' => 'col', 'COL.COLO4_26389' => 'col', 'COL.COLO4_27170' => 'col', 'COL.COLO4_31074' => 'col', 'COL.COLO4_31465' => 'col', 'COL.COLO4_36438' => 'col', 'COL.COLO4_36439' => 'col', 'Cpa.g.c38781' => 'cpa', 'Cpa.g.sc128.12' => 'cpa', 'Cpa.g.sc166.7' => 'cpa', 'Cpa.g.sc166.8' => 'cpa', 'Cpa.g.sc20.111' => 'cpa', 'Cpa.g.sc27.31' => 'cpa', 'Cpa.g.sc64.36' => 'cpa', 'Cpa.g.sc64.37' => 'cpa', 'Cpa.g.sc66.49' => 'cpa', 'Cpa.g.sc80.64' => 'cpa', 'CsaV3_1G012320' => 'csa', 'CsaV3_2G008480' => 'csa', 'CsaV3_2G033450' => 'csa', 'CsaV3_3G044830' => 'csa', 'CsaV3_4G033710' => 'csa', 'CsaV3_6G051730' => 'csa', 'CsaV3_7G025350' => 'csa', 'CSS0001067' => 'camsi', 'CSS0005996' => 'camsi', 'CSS0006590' => 'camsi', 'CSS0009673' => 'camsi', 'CSS0010201' => 'camsi', 'CSS0010549' => 'camsi', 'CSS0011364' => 'camsi', 'CSS0014473' => 'camsi', 'CSS0014961' => 'camsi', 'CSS0020191' => 'camsi', 'CSS0021165' => 'camsi', 'CSS0022306' => 'camsi', 'CSS0030591' => 'camsi', 'CSS0030696' => 'camsi', 'CSS0032653' => 'camsi', 'CSS0037487' => 'camsi', 'CSS0041102' => 'camsi', 'CSS0041261' => 'camsi', 'CSS0046246' => 'camsi', 'CSS0049256' => 'camsi', 'DCAR_004075' => 'dca', 'DCAR_011538' => 'dca', 'DCAR_019553' => 'dca', 'DCAR_020952' => 'dca', 'DCAR_021739' => 'dca', 'DCAR_027407' => 'dca', 'DCAR_027913' => 'dca', 'DCAR_028066' => 'dca', 'Dinv05899' => 'din', 'Dinv07563' => 'din', 'Dinv08010' => 'din', 'Dinv14125' => 'din', 'Dinv20172' => 'din', 'Dinv30743' => 'din', 'Dinv31229' => 'din', 'Dinv34162' => 'din', 'Dinv36028' => 'din', 'Dinv39368' => 'din', 'Dinv40565' => 'din', 'Dinv41706' => 'din', 'Duzib052G0089' => 'dzi', 'Duzib116G0641' => 'dzi', 'Duzib132G0069' => 'dzi', 'Duzib132G1219' => 'dzi', 'Duzib147G0278' => 'dzi', 'Duzib160G0480' => 'dzi', 'Duzib170G0661' => 'dzi', 'Duzib177G0591' => 'dzi', 'Duzib187G1353' => 'dzi', 'Duzib192G0858' => 'dzi', 'Duzib192G0883' => 'dzi', 'Duzib213G0506' => 'dzi', 'Duzib235G0289' => 'dzi', 'Duzib251G0422' => 'dzi', 'ECA232G3898' => 'eca', 'ECA233G5950' => 'eca', 'ECA234G1699' => 'eca', 'ECA234G2421' => 'eca', 'ECA236G0426' => 'eca', 'ECA236G4331' => 'eca', 'ECA248G2573' => 'eca', 'EL10Ac1g00077' => 'bvu', 'EL10Ac1g01746' => 'bvu', 'EL10Ac2g03464' => 'bvu', 'EL10Ac4g08176' => 'bvu', 'EL10Ac7g17521' => 'bvu', 'EL10Ac8g20386' => 'bvu', 'EL10Ac9g21343' => 'bvu', 'EL10Ac9g22688' => 'bvu', 'Eucgr.B03434' => 'egr', 'Eucgr.D00618' => 'egr', 'Eucgr.E02395' => 'egr', 'Eucgr.F01129' => 'egr', 'Eucgr.F02622' => 'egr', 'Eucgr.F04207' => 'egr', 'FAN01G0570' => 'fan', 'FAN03G3351' => 'fan', 'FAN06G3702' => 'fan', 'FAN07G2149' => 'fan', 'FAN10G3758' => 'fan', 'FAN11G1170' => 'fan', 'FAN11G2050' => 'fan', 'FAN11G2724' => 'fan', 'FAN12G1700' => 'fan', 'FAN12G2028' => 'fan', 'FAN15G1160' => 'fan', 'FAN15G3063' => 'fan', 'FAN16G2540' => 'fan', 'FAN16G3077' => 'fan', 'FAN16G3624' => 'fan', 'FAN17G0221' => 'fan', 'FAN20G2492' => 'fan', 'FAN20G2905' => 'fan', 'FAN21G0548' => 'fan', 'FAN21G1300' => 'fan', 'FAN22G0077' => 'fan', 'FAN22G1315' => 'fan', 'FAN24G1280' => 'fan', 'FAN24G1445' => 'fan', 'FAN24G3527' => 'fan', 'FAN25G0464' => 'fan', 'FAN25G2885' => 'fan', 'FAN25G3270' => 'fan', 'FAN27G1101' => 'fan', 'FAN27G2846' => 'fan', 'FAN27G3524' => 'fan', 'FvH4_2g11770' => 'fve', 'FvH4_2g15630' => 'fve', 'FvH4_3g05570' => 'fve', 'FvH4_3g09110' => 'fve', 'FvH4_3g19940' => 'fve', 'FvH4_4g04821' => 'fve', 'FvH4_4g31480' => 'fve', 'FvH4_7g01740' => 'fve', 'Glyma.05G130400' => 'gma', 'Glyma.05G156400' => 'gma', 'Glyma.07G197000' => 'gma', 'Glyma.08G085151' => 'gma', 'Glyma.08G114500' => 'gma', 'Glyma.08G300400' => 'gma', 'Glyma.10G215800' => 'gma', 'Glyma.12G224400' => 'gma', 'Glyma.13G179300' => 'gma', 'Glyma.13G218151' => 'gma', 'Glyma.13G238800' => 'gma', 'Glyma.13G276900' => 'gma', 'Glyma.14G078200' => 'gma', 'Glyma.15G074500' => 'gma', 'Glyma.15G094100' => 'gma', 'Glyma.17G247200' => 'gma', 'Glyma.18G120100' => 'gma', 'Glyma.20G176000' => 'gma', 'Gohir.A01G063600' => 'ghi', 'Gohir.A01G170301' => 'ghi', 'Gohir.A02G060500' => 'ghi', 'Gohir.A05G133850' => 'ghi', 'Gohir.A05G161400' => 'ghi', 'Gohir.A06G012900' => 'ghi', 'Gohir.A06G035901' => 'ghi', 'Gohir.A06G127100' => 'ghi', 'Gohir.A06G210500' => 'ghi', 'Gohir.A08G008650' => 'ghi', 'Gohir.A09G072700' => 'ghi', 'Gohir.A09G088301' => 'ghi', 'Gohir.A10G040600' => 'ghi', 'Gohir.A12G036300' => 'ghi', 'Gohir.A12G143350' => 'ghi', 'Gohir.A12G165500' => 'ghi', 'Gohir.A13G145700' => 'ghi', 'Gohir.D01G050000' => 'ghi', 'Gohir.D01G051366' => 'ghi', 'Gohir.D01G161350' => 'ghi', 'Gohir.D02G065900' => 'ghi', 'Gohir.D05G164200' => 'ghi', 'Gohir.D05G355500' => 'ghi', 'Gohir.D06G010400' => 'ghi', 'Gohir.D06G111250' => 'ghi', 'Gohir.D06G132000' => 'ghi', 'Gohir.D06G210500' => 'ghi', 'Gohir.D07G165675' => 'ghi', 'Gohir.D08G062240' => 'ghi', 'Gohir.D08G086101' => 'ghi', 'Gohir.D08G138060' => 'ghi', 'Gohir.D09G072300' => 'ghi', 'Gohir.D10G041400' => 'ghi', 'Gohir.D11G191020' => 'ghi', 'Gohir.D11G212066' => 'ghi', 'Gohir.D12G036300' => 'ghi', 'Gohir.D12G168600' => 'ghi', 'Gohir.D13G150600' => 'ghi', 'Gorai.001G057300' => 'gra', 'Gorai.002G069900' => 'gra', 'Gorai.002G200000' => 'gra', 'Gorai.003G067600' => 'gra', 'Gorai.005G074800' => 'gra', 'Gorai.006G087300' => 'gra', 'Gorai.008G037500' => 'gra', 'Gorai.008G181400' => 'gra', 'Gorai.009G169400' => 'gra', 'Gorai.009G387900' => 'gra', 'Gorai.010G013300' => 'gra', 'Gorai.010G153800' => 'gra', 'Gorai.010G255800' => 'gra', 'Gorai.011G043700' => 'gra', 'Gorai.011G198900' => 'gra', 'Gorai.013G168400' => 'gra', 'GSVIVG01005212001' => 'vvi', 'GSVIVG01006163001' => 'vvi', 'GSVIVG01009625001' => 'vvi', 'GSVIVG01014338001' => 'vvi', 'GSVIVG01020005001' => 'vvi', 'GSVIVG01021450001' => 'vvi', 'GSVIVG01023975001' => 'vvi', 'GSVIVG01034490001' => 'vvi', 'HanXRQChr04g0112071' => 'han', 'HanXRQChr05g0131151' => 'han', 'HanXRQChr09g0262371' => 'han', 'HanXRQChr09g0268401' => 'han', 'HanXRQChr10g0279241' => 'han', 'HanXRQChr10g0297961' => 'han', 'HanXRQChr11g0326231' => 'han', 'HanXRQChr11g0328471' => 'han', 'HanXRQChr16g0507941' => 'han', 'HanXRQChr17g0560211' => 'han', 'Haze_02108' => 'cav', 'Haze_02428' => 'cav', 'Haze_05593' => 'cav', 'Haze_06448' => 'cav', 'Haze_09427' => 'cav', 'Haze_12022' => 'cav', 'Haze_17612' => 'cav', 'Haze_17928' => 'cav', 'Hma1.2p1_0032F.1_g019250' => 'hma', 'Hma1.2p1_0163F.1_g072690' => 'hma', 'Hma1.2p1_0265F.1_g106710' => 'hma', 'Hma1.2p1_0286F.1_g113970' => 'hma', 'Hma1.2p1_0363F.1_g136640' => 'hma', 'Hma1.2p1_0584F.1_g183470' => 'hma', 'Hma1.2p1_0885F.1_g232570' => 'hma', 'HPP92_006022' => 'vpl', 'HPP92_007320' => 'vpl', 'HPP92_011521' => 'vpl', 'HPP92_019387' => 'vpl', 'HPP92_024038' => 'vpl', 'Hund05891' => 'sun', 'Hund06450' => 'sun', 'Hund12053' => 'sun', 'Hund16800' => 'sun', 'Hund21222' => 'sun', 'Hund22896' => 'sun', 'Hund23746' => 'sun', 'Hund27083' => 'sun', 'Lalb_Chr02g0141831' => 'lal', 'Lalb_Chr02g0141841' => 'lal', 'Lalb_Chr05g0220411' => 'lal', 'Lalb_Chr06g0162081' => 'lal', 'Lalb_Chr09g0327651' => 'lal', 'Lalb_Chr13g0295051' => 'lal', 'Lalb_Chr15g0086801' => 'lal', 'Lalb_Chr16g0383781' => 'lal', 'Lalb_Chr16g0383791' => 'lal', 'Lalb_Chr18g0055441' => 'lal', 'Lalb_Chr18g0059611' => 'lal', 'Lalb_Chr20g0109661' => 'lal', 'Lalb_Chr20g0109831' => 'lal', 'Lalb_Chr20g0121871' => 'lal', 'Lalb_Chr22g0355361' => 'lal', 'Lalb_Chr25g0286371' => 'lal', 'Lj1A1187G43' => 'lonja', 'Lj1A1205T50' => 'lonja', 'Lj1A800G33' => 'lonja', 'Lj1C1187T7' => 'lonja', 'Lj1C843T11' => 'lonja', 'Lj1g0010940' => 'lja', 'Lj2A288T69' => 'lonja', 'Lj3g0024276' => 'lja', 'Lj4A47T76' => 'lonja', 'Lj4g0005805' => 'lja', 'Lj4g0006097' => 'lja', 'Lj4g0008528' => 'lja', 'Lj4g0024907' => 'lja', 'Lj5g0012472' => 'lja', 'Lj5g0018648' => 'lja', 'Lj6C789G1' => 'lonja', 'Lj6g0004000' => 'lja', 'Lj7A292G67' => 'lonja', 'Lj7A292T64' => 'lonja', 'Lj9A400T58' => 'lonja', 'Lsat_1_v5_gn_1_126181' => 'lsa', 'Lsat_1_v5_gn_4_123041' => 'lsa', 'Lsat_1_v5_gn_4_133620' => 'lsa', 'Lsat_1_v5_gn_4_53221' => 'lsa', 'Lsat_1_v5_gn_4_71961' => 'lsa', 'Lsat_1_v5_gn_7_105241' => 'lsa', 'Lsat_1_v5_gn_7_21361' => 'lsa', 'Lsat_1_v5_gn_7_28860' => 'lsa', 'Lsat_1_v5_gn_7_31260' => 'lsa', 'Lsat_1_v5_gn_8_52801' => 'lsa', 'Manes.02G191400' => 'mes', 'Manes.03G110100' => 'mes', 'Manes.04G071100' => 'mes', 'Manes.05G100500' => 'mes', 'Manes.05G164700' => 'mes', 'Manes.15G087000' => 'mes', 'Manes.15G121500' => 'mes', 'Manes.16G028300' => 'mes', 'Manes.17G046100' => 'mes', 'Manes.17G069800' => 'mes', 'Manes.18G100500' => 'mes', 'Mapoly0002s0109' => 'mpo', 'Mapoly0024s0007' => 'mpo', 'Mapoly0089s0032' => 'mpo', 'MBI04_g42241_MAGBIO' => 'mbi', 'MBI05_g11988_MAGBIO' => 'mbi', 'MBI05_g35452_MAGBIO' => 'mbi', 'MBI07_g30179_MAGBIO' => 'mbi', 'MBI07_g35859_MAGBIO' => 'mbi', 'MBI07_g35860_MAGBIO' => 'mbi', 'MBI07_g37166_MAGBIO' => 'mbi', 'MBI08_g18172_MAGBIO' => 'mbi', 'MBI09_g08441_MAGBIO' => 'mbi', 'MBI13_g01676_MAGBIO' => 'mbi', 'MBI14_g42955_MAGBIO' => 'mbi', 'MBI16_g13161_MAGBIO' => 'mbi', 'MBI17_g27204_MAGBIO' => 'mbi', 'MBI19_g21595_MAGBIO' => 'mbi', 'MD00G1148400' => 'mdo', 'MD02G1301200' => 'mdo', 'MD03G1227800' => 'mdo', 'MD05G1041100' => 'mdo', 'MD05G1124800' => 'mdo', 'MD05G1284000' => 'mdo', 'MD05G1338800' => 'mdo', 'MD05G1338900' => 'mdo', 'MD07G1022800' => 'mdo', 'MD10G1047500' => 'mdo', 'MD10G1127500' => 'mdo', 'MD10G1262300' => 'mdo', 'MD10G1293800' => 'mdo', 'MD16G1074300' => 'mdo', 'Medtr1g021670' => 'mtr', 'Medtr1g096320' => 'mtr', 'Medtr2g013690' => 'mtr', 'Medtr2g019450' => 'mtr', 'Medtr2g085170' => 'mtr', 'Medtr4g088785' => 'mtr', 'Medtr8g055930' => 'mtr', 'Medtr8g085850' => 'mtr', 'MELO3C002605.2' => 'cme', 'MELO3C003891.2' => 'cme', 'MELO3C004012.2' => 'cme', 'MELO3C007134.2' => 'cme', 'MELO3C008118.2' => 'cme', 'MELO3C016700.2' => 'cme', 'MELO3C024127.2' => 'cme', 'MELO3C033361.2' => 'cme', 'MELO3C033362.2' => 'cme', 'Migut.C00430' => 'egut', 'Migut.C01246' => 'egut', 'Migut.E00101' => 'egut', 'Migut.H01486' => 'egut', 'Migut.H01939' => 'egut', 'Migut.K00360' => 'egut', 'Migut.M00910' => 'egut', 'Migut.M01139' => 'egut', 'Migut.N02677' => 'egut', 'MSTRG.13252' => 'ama', 'MSTRG.14701' => 'ama', 'MSTRG.1521' => 'ama', 'MSTRG.15884' => 'ama', 'MSTRG.16242' => 'ama', 'MSTRG.22285' => 'ama', 'MSTRG.22444' => 'ama', 'MSTRG.2349' => 'ama', 'MSTRG.26308' => 'ama', 'MSTRG.28296' => 'ama', 'MSTRG.9895' => 'ama', 'Nitab4.5_0000110g0060' => 'nta', 'Nitab4.5_0000420g0130' => 'nta', 'Nitab4.5_0000422g0030' => 'nta', 'Nitab4.5_0000560g0180' => 'nta', 'Nitab4.5_0000703g0100' => 'nta', 'Nitab4.5_0000786g0200' => 'nta', 'Nitab4.5_0001336g0020' => 'nta', 'Nitab4.5_0001796g0030' => 'nta', 'Nitab4.5_0003348g0060' => 'nta', 'Nitab4.5_0003698g0040' => 'nta', 'Nitab4.5_0003942g0090' => 'nta', 'Nitab4.5_0004775g0070' => 'nta', 'Nitab4.5_0004864g0030' => 'nta', 'Nitab4.5_0005615g0020' => 'nta', 'Nitab4.5_0009288g0030' => 'nta', 'Nitab4.5_0009341g0010' => 'nta', 'Nitab4.5_0009535g0010' => 'nta', 'Nn1g03995' => 'nnu', 'Nn1g04100' => 'nnu', 'Nn1g06530' => 'nnu', 'Nn3g16404' => 'nnu', 'Nn3g17212' => 'nnu', 'Nn3g20776' => 'nnu', 'Nn3g21923' => 'nnu', 'Nn5g27737' => 'nnu', 'Nn5g29461' => 'nnu', 'Nn7g38355' => 'nnu', 'Nn8g39873' => 'nnu', 'Oeu000548.2' => 'oeu', 'Oeu004672.1' => 'oeu', 'Oeu015605.2' => 'oeu', 'Oeu016092.1' => 'oeu', 'Oeu017879.3' => 'oeu', 'Oeu024910.1' => 'oeu', 'Oeu028965.1' => 'oeu', 'Oeu031269.1' => 'oeu', 'Oeu031270.1' => 'oeu', 'Oeu032535.1' => 'oeu', 'Oeu034151.1' => 'oeu', 'Oeu034152.1' => 'oeu', 'Oeu034588.2' => 'oeu', 'Oeu050846.1' => 'oeu', 'Oeu050849.2' => 'oeu', 'Oeu051063.2' => 'oeu', 'Oeu052368.1' => 'oeu', 'Oeu052370.1' => 'oeu', 'Os01g0210400' => 'osa', 'Os01g0304300' => 'osa', 'Os01g0749100' => 'osa', 'Os02g0745800' => 'osa', 'Os03g0769050' => 'osa', 'Os05g0531500' => 'osa', 'Os06g0724300' => 'osa', 'Os11g0198100' => 'osa', 'Peaxi162Scf00069g01425' => 'pax', 'Peaxi162Scf00280g00811' => 'pax', 'Peaxi162Scf00310g00615' => 'pax', 'Peaxi162Scf00362g00542' => 'pax', 'Peaxi162Scf00461g00310' => 'pax', 'Peaxi162Scf00530g00118' => 'pax', 'Peaxi162Scf00541g00057' => 'pax', 'Peaxi162Scf00661g00017' => 'pax', 'Peaxi162Scf00926g00027' => 'pax', 'Peaxi162Scf01064g00263' => 'pax', 'Peaxi162Scf01211g00135' => 'pax', 'PGR004G2336' => 'pgr', 'PGR042G0327' => 'pgr', 'PGR042G1957' => 'pgr', 'PGR042G2003' => 'pgr', 'PGR042G3929' => 'pgr', 'PGR083G1137' => 'pgr', 'PGR083G1364' => 'pgr', 'PGSC0003DMG400003381' => 'stu', 'PGSC0003DMG400003417' => 'stu', 'PGSC0003DMG400008981' => 'stu', 'PGSC0003DMG400012417' => 'stu', 'PGSC0003DMG400012823' => 'stu', 'PGSC0003DMG400016885' => 'stu', 'PGSC0003DMG400022812' => 'stu', 'PGSC0003DMG400029726' => 'stu', 'PGSC0003DMG401009243' => 'stu', 'PGSC0003DMG401031505' => 'stu', 'PGSC0003DMG402031505' => 'stu', 'Phvul.001G017600' => 'pvu', 'Phvul.002G193500' => 'pvu', 'Phvul.002G228900' => 'pvu', 'Phvul.002G236800' => 'pvu', 'Phvul.003G049500' => 'pvu', 'Phvul.005G072000' => 'pvu', 'Phvul.006G164800' => 'pvu', 'Phvul.006G185100' => 'pvu', 'Phvul.007G090000' => 'pvu', 'Potri.001G399800' => 'ptr', 'Potri.002G149900' => 'ptr', 'Potri.004G044100' => 'ptr', 'Potri.004G177600' => 'ptr', 'Potri.009G138000' => 'ptr', 'Potri.010G094000' => 'ptr', 'Potri.011G053000' => 'ptr', 'Potri.011G119300' => 'ptr', 'Potri.013G113700' => 'ptr', 'Potri.018G107800' => 'ptr', 'Potri.019G084100' => 'ptr', 'Pp3c14_23720' => 'ppa', 'Pp3c16_6340' => 'ppa', 'Pp3c23_13420' => 'ppa', 'Pp3c24_2740' => 'ppa', 'Pp3c25_860' => 'ppa', 'Pp3c8_21750' => 'ppa', 'Prupe.1G273000' => 'ppe', 'Prupe.1G273700' => 'ppe', 'Prupe.1G274100' => 'ppe', 'Prupe.2G023300' => 'ppe', 'Prupe.4G048000' => 'ppe', 'Prupe.4G080400' => 'ppe', 'Prupe.4G181200' => 'ppe', 'Prupe.8G056900' => 'ppe', 'Prupe.8G168700' => 'ppe', 'Psat1g189080' => 'psa', 'Psat1g204760' => 'psa', 'Psat4g175560' => 'psa', 'Psat4g177720' => 'psa', 'Psat5g244240' => 'psa', 'Psat6g010720' => 'psa', 'Psat6g187200' => 'psa', 'Psat7g072040' => 'psa', 'PSO017G3501' => 'pso', 'PSO063G2148' => 'pso', 'PSO063G5608' => 'pso', 'PSO210G6392' => 'pso', 'PSO541G2319' => 'pso', 'PSO541G2836' => 'pso', 'PSO541G4012' => 'pso', 'PSO541G6253' => 'pso', 'PSO675G0580' => 'pso', 'PSO675G0856' => 'pso', 'PSO675G5635' => 'pso', 'PSO675G9157' => 'pso', 'PSO832G1660' => 'pso', 'PSO832G1969' => 'pso', 'QL02p007186' => 'qlo', 'QL02p033904' => 'qlo', 'QL03p064391' => 'qlo', 'QL05p040593' => 'qlo', 'QL05p058242' => 'qlo', 'QL08p021825' => 'qlo', 'QL11p004981' => 'qlo', 'RcHm_v2.0_Chr1g0318301' => 'rch', 'RcHm_v2.0_Chr4g0418501' => 'rch', 'RcHm_v2.0_Chr4g0439971' => 'rch', 'RcHm_v2.0_Chr5g0008541' => 'rch', 'RcHm_v2.0_Chr5g0014101' => 'rch', 'RcHm_v2.0_Chr5g0014131' => 'rch', 'RcHm_v2.0_Chr5g0033621' => 'rch', 'RcHm_v2.0_Chr6g0272041' => 'rch', 'RcHm_v2.0_Chr6g0278831' => 'rch', 'Rhsim02G0130400' => 'rsi', 'Rhsim02G0171100' => 'rsi', 'Rhsim05G0053000' => 'rsi', 'Rhsim05G0053100' => 'rsi', 'Rhsim06G0096500' => 'rsi', 'Rhsim06G0096600' => 'rsi', 'Rhsim06G0199100' => 'rsi', 'Rhsim12G0062300' => 'rsi', 'Rhsim12G0062800' => 'rsi', 'Sabra02G0118600' => 'sbr', 'Sabra04G0027300' => 'sbr', 'Sabra04G0119500' => 'sbr', 'Sabra08G0112500' => 'sbr', 'Sabra11G0036800' => 'sbr', 'Sabra11G0103800' => 'sbr', 'Sabra13G0096300' => 'sbr', 'Sabra16G0262300' => 'sbr', 'Sabra18G0091700' => 'sbr', 'Sabra19G0095400' => 'sbr', 'SalBow6G3080' => 'sbo', 'SalBow7G1157' => 'sbo', 'SalBow7G2123' => 'sbo', 'SalBow7G2285' => 'sbo', 'SalBow7G3537' => 'sbo', 'SalBow8G2947' => 'sbo', 'SalBow8G4463' => 'sbo', 'SalBow8G5466' => 'sbo', 'Sc01g0001750' => 'sci', 'Sc02g0006640' => 'sci', 'Sc02g0006670' => 'sci', 'Sc04g0008220' => 'sci', 'Sc05g0006190' => 'sci', 'Sc08g0002760' => 'sci', 'Sc17g0006170' => 'sci', 'Sc22g0002050' => 'sci', 'Sc23g0001190' => 'sci', 'Sc24g0000980' => 'sci', 'Sed0006245' => 'sed', 'Sed0007543' => 'sed', 'Sed0009411' => 'sed', 'Sed0010765' => 'sed', 'Sed0012944' => 'sed', 'Sed0014682' => 'sed', 'Sed0016174' => 'sed', 'Sed0016796' => 'sed', 'Sed0020317' => 'sed', 'Sed0021467' => 'sed', 'SEGI_01316' => 'sgi', 'SEGI_03374' => 'sgi', 'SEGI_16265' => 'sgi', 'SEGI_18569' => 'sgi', 'SEGI_20351' => 'sgi', 'SEGI_26395' => 'sgi', 'SEGI_29469' => 'sgi', 'SEGI_34771' => 'sgi', 'SEGI_36769' => 'sgi', 'SEGI_37139' => 'sgi', 'SGA_v2.0_scaffold100G29687' => 'sas', 'SGA_v2.0_scaffold118G32472' => 'sas', 'SGA_v2.0_scaffold14G07051' => 'sas', 'SGA_v2.0_scaffold183G39845' => 'sas', 'SGA_v2.0_scaffold1G00174' => 'sas', 'SGA_v2.0_scaffold22G09714' => 'sas', 'SGA_v2.0_scaffold333G48992' => 'sas', 'SGA_v2.0_scaffold46G17491' => 'sas', 'SGA_v2.0_scaffold49G18294' => 'sas', 'SGA_v2.0_scaffold63G21658' => 'sas', 'SHI01741' => 'shi', 'SHI05771' => 'shi', 'SHI18077' => 'shi', 'SHI20525' => 'shi', 'SHI20527' => 'shi', 'SHI20528' => 'shi', 'SMO172G0185' => 'smo', 'SMO198G0020' => 'smo', 'SMO351G0006' => 'smo', 'SMO356G0118' => 'smo', 'SMO358G0296' => 'smo', 'SMO367G0079' => 'smo', 'SMO367G1277' => 'smo', 'Solyc01g014220.3' => 'sly', 'Solyc01g111770.2' => 'sly', 'Solyc02g078180.3' => 'sly', 'Solyc03g006430.3' => 'sly', 'Solyc03g006456.1' => 'sly', 'Solyc03g079860.2' => 'sly', 'Solyc04g079770.3' => 'sly', 'Solyc05g007430.4' => 'sly', 'Solyc07g063150.3' => 'sly', 'Solyc08g016620.3' => 'sly', 'Solyc09g057590.3' => 'sly', 'Solyc09g057600.1' => 'sly', 'Solyc10g009050.3' => 'sly', 'Solyc11g017420.2' => 'sly', 'Sopen01g053810' => 'spe', 'Sopen02g023040' => 'spe', 'Sopen03g002440' => 'spe', 'Sopen04g033350' => 'spe', 'Sopen05g003310' => 'spe', 'Sopen07g004050' => 'spe', 'Sopen07g031340' => 'spe', 'Sopen08g006990' => 'spe', 'Sopen10g004830' => 'spe', 'Sopen11g009370' => 'spe', 'Sp1g24450' => 'spa', 'Sp1g29670' => 'spa', 'Sp1g39600' => 'spa', 'Sp2g11080' => 'spa', 'Sp2g13970' => 'spa', 'Sp4g16130' => 'spa', 'Sp6g13080' => 'spa', 'Sp7g37270' => 'spa', 'TAR371G0065' => 'tar', 'TAR376G0340' => 'tar', 'TAR376G0435' => 'tar', 'TAR381G0002' => 'tar', 'TAR381G1236' => 'tar', 'TAR624G0055' => 'tar', 'TAR624G0324' => 'tar', 'TAR624G0696' => 'tar', 'TAR624G0906' => 'tar', 'TAR625G0107' => 'tar', 'TAR626G0015' => 'tar', 'TAR626G1356' => 'tar', 'TAR627G0888' => 'tar', 'TAR628G0399' => 'tar', 'TAR628G1327' => 'tar', 'TAR629G2831' => 'tar', 'TAR629G2874' => 'tar', 'TAR633G1432' => 'tar', 'TAR633G2771' => 'tar', 'THA.LOC104803394' => 'tha', 'THA.LOC104805153' => 'tha', 'THA.LOC104806784' => 'tha', 'THA.LOC104810473' => 'tha', 'THA.LOC104813100' => 'tha', 'THA.LOC104814215' => 'tha', 'THA.LOC104815554' => 'tha', 'THA.LOC104820544' => 'tha', 'THA.LOC104824754' => 'tha', 'THA.LOC104827717' => 'tha', 'Thecc.02G031400' => 'tca', 'Thecc.02G055900' => 'tca', 'Thecc.02G350800' => 'tca', 'Thecc.06G150900' => 'tca', 'Thecc.06G186600' => 'tca', 'Thecc.07G089600' => 'tca', 'Thecc.08G020400' => 'tca', 'Thecc.08G182100' => 'tca', 'Thhalv10000873m.g' => 'esa', 'Thhalv10004185m.g' => 'esa', 'Thhalv10006981m.g' => 'esa', 'Thhalv10007204m.g' => 'esa', 'Thhalv10011374m.g' => 'esa', 'Thhalv10013482m.g' => 'esa', 'Thhalv10017801m.g' => 'esa', 'Thhalv10024983m.g' => 'esa', 'TPR.G12072' => 'tpr', 'TPR.G15769' => 'tpr', 'TPR.G16504' => 'tpr', 'TPR.G16506' => 'tpr', 'TPR.G24345' => 'tpr', 'TPR.G26666' => 'tpr', 'TPR.G27320' => 'tpr', 'TPR.G31819' => 'tpr', 'TPR.G38879' => 'tpr', 'TPR.G39015' => 'tpr', 'TPR.G8819' => 'tpr', 'TWI09G0924' => 'twi', 'TWI12G0811' => 'twi', 'TWI12G1294' => 'twi', 'TWI31G0150' => 'twi', 'TWI36G1262' => 'twi', 'TWI38G1287' => 'twi', 'TWI38G1633' => 'twi', 'TWI38G1982' => 'twi', 'TWI39G0116' => 'twi', 'TWI60G1011' => 'twi', 'TWI63G0171' => 'twi', 'TWI73G0839' => 'twi', 'TWI79G1511' => 'twi', 'unitig_0.g915' => 'ugi', 'unitig_0.g916' => 'ugi', 'unitig_21.g20219' => 'ugi', 'unitig_21.g20416' => 'ugi', 'unitig_578.g16132' => 'ugi', 'unitig_578.g16718' => 'ugi', 'unitig_62.g23481' => 'ugi', 'unitig_744.g24535' => 'ugi', 'unitig_749.g13525' => 'ugi', 'vmacro01248' => 'vma', 'vmacro02290' => 'vma', 'vmacro10946' => 'vma', 'vmacro11865' => 'vma', 'vmacro12493' => 'vma', 'vmacro17322' => 'vma', 'vmacro21599' => 'vma', 'vmacro23041' => 'vma', 'VMungo0251G0004' => 'vmu', 'VMungo0251G2639' => 'vmu', 'VMungo0251G2967' => 'vmu', 'VMungo0540G0864' => 'vmu', 'VMungo0540G1569' => 'vmu', 'VMungo0647G0317' => 'vmu', 'VMungo0720G1373' => 'vmu', 'VMungo0720G1508' => 'vmu', 'VMungo1080G0485' => 'vmu', 'VMungo1215G3177' => 'vmu', 'Zm00001eb112600' => 'zma', 'Zm00001eb120220' => 'zma', 'Zm00001eb153240' => 'zma', 'Zm00001eb168880' => 'zma', 'Zm00001eb213920' => 'zma', 'Zm00001eb228280' => 'zma', 'Zm00001eb254580' => 'zma', 'Zm00001eb272180' => 'zma', 'Zm00001eb293190' => 'zma', 'Zm00001eb322930' => 'zma', 'Zm00001eb353360' => 'zma', 'Zm00001eb353390' => 'zma', 'Zm00001eb353430' => 'zma', 'Zm00001eb353440' => 'zma', 'Zm00001eb353780' => 'zma' ) $gf_id = 'HOM05D000499' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000499' ) $data_identifier = 'HOM05D000499' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 29, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 12, 'amhyb' => (int) 8, 'aly' => (int) 12, 'aox' => (int) 9, 'arhy' => (int) 26, 'ath' => (int) 8, 'atr' => (int) 7, 'acertr' => (int) 10, 'cqu' => (int) 15, 'bca' => (int) 29, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 11, 'cansat' => (int) 8, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 9, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 8, 'cpa' => (int) 10, 'csa' => (int) 7, 'camsi' => (int) 20, 'dca' => (int) 8, 'din' => (int) 12, 'dzi' => (int) 14, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 6, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 38, 'gra' => (int) 16, 'vvi' => (int) 8, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 5, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 11, 'lja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 11, 'mpo' => (int) 3, 'mbi' => (int) 14, 'mdo' => (int) 14, 'mtr' => (int) 8, 'cme' => (int) 9, 'egut' => (int) 9, 'ama' => (int) 11, 'nta' => (int) 17, 'nnu' => (int) 11, 'oeu' => (int) 18, 'osa' => (int) 8, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 6, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 9, 'rsi' => (int) 9, 'sbr' => (int) 10, 'sbo' => (int) 8, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 10, 'sas' => (int) 10, 'shi' => (int) 6, 'smo' => (int) 7, 'sly' => (int) 14, 'spe' => (int) 10, 'spa' => (int) 8, 'tar' => (int) 19, 'tha' => (int) 10, 'tca' => (int) 8, 'esa' => (int) 8, 'tpr' => (int) 11, 'twi' => (int) 13, 'ugi' => (int) 9, 'vma' => (int) 8, 'vmu' => (int) 10, 'zma' => (int) 15 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb353780' $species_info = array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ) $local_species = 'ath' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000499', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1066', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p29780' => 'bna', 'A02p33180' => 'bna', 'A03p16470' => 'bna', 'A03p66010' => 'bna', 'A04p25970' => 'bna', 'A06p01270' => 'bna', 'A06p46080' => 'bna', 'A07p11400' => 'bna', 'A08p01840' => 'bna', 'A08p08230' => 'bna', 'A08p25740' => 'bna', 'A09p32070' => 'bna', 'A09p37830' => 'bna', 'A09p42840' => 'bna', 'A09p42850' => 'bna', 'Aa31LG10G2060' => 'aar', 'Aa31LG2G7410' => 'aar', 'Aa31LG6G10200' => 'aar', 'Aa31LG6G16680' => 'aar', 'Aa31LG6G8470' => 'aar', 'Aa31LG9G12730' => 'aar', 'Aa31LG9G13680' => 'aar', 'Aa31LG9G14920' => 'aar', 'Aa31LG9G6650' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4977' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5467' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3254' => 'aag', 'Actinidia02578' => 'ach', 'Actinidia07693' => 'ach', 'Actinidia08413' => 'ach', 'Actinidia08414' => 'ach', 'Actinidia15289' => 'ach', 'Actinidia19871' => 'ach', 'Actinidia21475' => 'ach', 'Actinidia22576' => 'ach', 'Actinidia28327' => 'ach', 'Actinidia32491' => 'ach', 'Actinidia39463' => 'ach', 'Actinidia39571' => 'ach', 'Ah.01g013750' => 'amhyb', 'Ah.01g023210' => 'amhyb', 'Ah.04g164850' => 'amhyb', 'Ah.05g178060' => 'amhyb', 'Ah.07g204270' => 'amhyb', 'Ah.07g208480' => 'amhyb', 'Ah.09g237410' => 'amhyb', 'Ah.14g089460' => 'amhyb', 'AL1G41790' => 'aly', 'AL1G49050' => 'aly', 'AL1G53810' => 'aly', 'AL1G61400' => 'aly', 'AL4G18580' => 'aly', 'AL5G12510' => 'aly', 'AL5G12540' => 'aly', 'AL6G43230' => 'aly', 'AL7G10370' => 'aly', 'AL7G19250' => 'aly', 'AL8G12240' => 'aly', 'AL8G18540' => 'aly', 'Aqoxy1G02409' => 'aox', 'Aqoxy2G03993' => 'aox', 'Aqoxy3G03357' => 'aox', 'Aqoxy4G00785' => 'aox', 'Aqoxy5G02598' => 'aox', 'Aqoxy6G00132' => 'aox', 'Aqoxy7G01776' => 'aox', 'Aqoxy7G02316' => 'aox', 'Aqoxy7G03973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.12AFKW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B8730' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27IQR1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3F75VG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3RE0GA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41TCQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.527VTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FIR39' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5W8UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DA38EV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ63HS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H1I32C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HC27T5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4M8AP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7N3CZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9UVDZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LS1NQA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT1D4B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SKC4TM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCFV76' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF9Q1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQWD9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1ZM88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WE07RT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YCK7VH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJE6Q6' => 'arhy', 'AT1G28240' => 'ath', 'AT1G34550' => 'ath', 'AT1G53040' => 'ath', 'AT2G02910' => 'ath', 'AT4G09630' => 'ath', 'AT4G38500' => 'ath', 'AT5G42660' => 'ath', 'AT5G46220' => 'ath', 'ATR0152G026' => 'atr', 'ATR0564G343' => 'atr', 'ATR0706G151' => 'atr', 'ATR0733G207' => 'atr', 'ATR0751G234' => 'atr', 'ATR0807G048' => 'atr', 'ATR1091G084' => 'atr', 'Atru.chr10.1229' => 'acertr', 'Atru.chr10.1230' => 'acertr', 'Atru.chr10.1874' => 'acertr', 'Atru.chr11.1808' => 'acertr', 'Atru.chr13.1795' => 'acertr', 'Atru.chr13.570' => 'acertr', 'Atru.chr2.2608' => 'acertr', 'Atru.chr2.2609' => 'acertr', 'Atru.chr5.3428' => 'acertr', 'Atru.chr8.1171' => 'acertr', 'AUR62004651' => 'cqu', 'AUR62008675' => 'cqu', 'AUR62010014' => 'cqu', 'AUR62013004' => 'cqu', 'AUR62014825' => 'cqu', 'AUR62015015' => 'cqu', 'AUR62015151' => 'cqu', 'AUR62017020' => 'cqu', 'AUR62019422' => 'cqu', 'AUR62023570' => 'cqu', 'AUR62025571' => 'cqu', 'AUR62029098' => 'cqu', 'AUR62033863' => 'cqu', 'AUR62034296' => 'cqu', 'AUR62040075' => 'cqu', 'BcaB02g07334' => 'bca', 'BcaB02g10575' => 'bca', 'BcaB03g12119' => 'bca', 'BcaB03g12120' => 'bca', 'BcaB03g13945' => 'bca', 'BcaB04g17123' => 'bca', 'BcaB04g17867' => 'bca', 'BcaB04g19839' => 'bca', 'BcaB07g30317' => 'bca', 'BcaB07g32432' => 'bca', 'BcaB07g33362' => 'bca', 'BcaB08g36611' => 'bca', 'BcaC01g00028' => 'bca', 'BcaC01g01356' => 'bca', 'BcaC01g02034' => 'bca', 'BcaC01g06051' => 'bca', 'BcaC03g16839' => 'bca', 'BcaC03g17176' => 'bca', 'BcaC05g26829' => 'bca', 'BcaC06g31490' => 'bca', 'BcaC06g35344' => 'bca', 'BcaC06g36570' => 'bca', 'BcaC07g37537' => 'bca', 'BcaC08g43491' => 'bca', 'BcaC08g43773' => 'bca', 'BcaNung00234' => 'bca', 'BcaNung01982' => 'bca', 'BcaNung03707' => 'bca', 'BcaNung06454' => 'bca', 'BolC2t10762H' => 'bol', 'BolC2t11191H' => 'bol', 'BolC3t14322H' => 'bol', 'BolC3t19747H' => 'bol', 'BolC3t21425H' => 'bol', 'BolC4t27800H' => 'bol', 'BolC5t31423H' => 'bol', 'BolC6t35951H' => 'bol', 'BolC6t36282H' => 'bol', 'BolC7t40678H' => 'bol', 'BolC7t40679H' => 'bol', 'BolC7t42222H' => 'bol', 'BolC7t43492H' => 'bol', 'BolC7t46785H' => 'bol', 'BolC8t47853H' => 'bol', 'BolC9t56805H' => 'bol', 'BraA02t08000Z' => 'bra', 'BraA02t08341Z' => 'bra', 'BraA03t10936Z' => 'bra', 'BraA03t15657Z' => 'bra', 'BraA04t18100Z' => 'bra', 'BraA05t20523Z' => 'bra', 'BraA06t23353Z' => 'bra', 'BraA06t27473Z' => 'bra', 'BraA06t27769Z' => 'bra', 'BraA07t28928Z' => 'bra', 'BraA08t32236Z' => 'bra', 'BraA08t32841Z' => 'bra', 'BraA08t34524Z' => 'bra', 'BraA09t38742Z' => 'bra', 'BraA09t39295Z' => 'bra', 'C02p47180' => 'bna', 'C02p50990' => 'bna', 'C03p19360' => 'bna', 'C03p74950' => 'bna', 'C03p91000' => 'bna', 'C04p63260' => 'bna', 'C05p27050' => 'bna', 'C06p08750' => 'bna', 'C06p11490' => 'bna', 'C07p02820' => 'bna', 'C07p17180' => 'bna', 'C07p29440' => 'bna', 'C07p63730' => 'bna', 'C09p39260' => 'bna', 'CAN.G1164.34' => 'can', 'CAN.G1164.39' => 'can', 'CAN.G1530.3' => 'can', 'CAN.G162.61' => 'can', 'CAN.G176.6' => 'can', 'CAN.G289.49' => 'can', 'CAN.G370.21' => 'can', 'CAN.G370.22' => 'can', 'CAN.G371.117' => 'can', 'CAN.G58.37' => 'can', 'CAN.G588.98' => 'can', 'CANSAT21G2266' => 'cansat', 'CANSAT25G2799' => 'cansat', 'CANSAT35G0862' => 'cansat', 'CANSAT35G1704' => 'cansat', 'CANSAT35G1760' => 'cansat', 'CANSAT56G3971' => 'cansat', 'CANSAT56G4116' => 'cansat', 'CANSAT80G1259' => 'cansat', 'CARHR027730' => 'chi', 'CARHR033880' => 'chi', 'CARHR043270' => 'chi', 'CARHR145330' => 'chi', 'CARHR145340' => 'chi', 'CARHR175570' => 'chi', 'CARHR181570' => 'chi', 'CARHR258470' => 'chi', 'CARHR260490' => 'chi', 'CARHR294220' => 'chi', 'Carub.0001s2668' => 'cru', 'Carub.0001s3257' => 'cru', 'Carub.0001s4220' => 'cru', 'Carub.0005s0179' => 'cru', 'Carub.0006s2807' => 'cru', 'Carub.0007s0039' => 'cru', 'Carub.0008s0169' => 'cru', 'Carub.0008s0636' => 'cru', 'Ca_00338_v3' => 'car', 'Ca_00542_v3' => 'car', 'Ca_01844_v3' => 'car', 'Ca_10611_v3' => 'car', 'Ca_13326_v3' => 'car', 'Ca_17944_v3' => 'car', 'Ca_18546_v3' => 'car', 'Ca_24219_v3' => 'car', 'Ca_29972_v3' => 'car', 'CBR_g3681' => 'cbr', 'CBR_g40021' => 'cbr', 'Cc01_g08140' => 'ccan', 'Cc02_g13410' => 'ccan', 'Cc02_g37480' => 'ccan', 'Cc05_g12030' => 'ccan', 'Cc09_g03370' => 'ccan', 'Cc09_g10300' => 'ccan', 'Cc10_g03530' => 'ccan', 'Cc10_g11380' => 'ccan', 'CDE01G0176' => 'cde', 'CDE02G0675' => 'cde', 'CDE02G0942' => 'cde', 'CDE02G1153' => 'cde', 'CDE02G4177' => 'cde', 'CDE04G2117' => 'cde', 'CDE04G2736' => 'cde', 'CDE08G1161' => 'cde', 'CDE09G1238' => 'cde', 'Cfa000467' => 'cfa', 'Cfa000947' => 'cfa', 'Cfa004969' => 'cfa', 'Cfa005284' => 'cfa', 'Cfa008993' => 'cfa', 'Cfa018187' => 'cfa', 'Cfa018454' => 'cfa', 'Cfa020585' => 'cfa', 'Ciclev10000424m.g' => 'ccl', 'Ciclev10003605m.g' => 'ccl', 'Ciclev10007828m.g' => 'ccl', 'Ciclev10014620m.g' => 'ccl', 'Ciclev10015169m.g' => 'ccl', 'Ciclev10018291m.g' => 'ccl', 'Ciclev10028256m.g' => 'ccl', 'Ciclev10033822m.g' => 'ccl', 'CiPaw.05G060300' => 'cil', 'CiPaw.05G085000' => 'cil', 'CiPaw.06G083700' => 'cil', 'CiPaw.06G120300' => 'cil', 'CiPaw.09G060500' => 'cil', 'CiPaw.09G123800' => 'cil', 'CiPaw.11G169700' => 'cil', 'CiPaw.12G118300' => 'cil', 'CiPaw.15G071000' => 'cil', 'CiPaw.15G081900' => 'cil', 'ClCG01G024610' => 'cla', 'ClCG03G006070' => 'cla', 'ClCG05G019250' => 'cla', 'ClCG09G009500' => 'cla', 'ClCG11G008200' => 'cla', 'ClCG11G018080' => 'cla', 'COL.COLO4_17373' => 'col', 'COL.COLO4_22994' => 'col', 'COL.COLO4_26389' => 'col', 'COL.COLO4_27170' => 'col', 'COL.COLO4_31074' => 'col', 'COL.COLO4_31465' => 'col', 'COL.COLO4_36438' => 'col', 'COL.COLO4_36439' => 'col', 'Cpa.g.c38781' => 'cpa', 'Cpa.g.sc128.12' => 'cpa', 'Cpa.g.sc166.7' => 'cpa', 'Cpa.g.sc166.8' => 'cpa', 'Cpa.g.sc20.111' => 'cpa', 'Cpa.g.sc27.31' => 'cpa', 'Cpa.g.sc64.36' => 'cpa', 'Cpa.g.sc64.37' => 'cpa', 'Cpa.g.sc66.49' => 'cpa', 'Cpa.g.sc80.64' => 'cpa', 'CsaV3_1G012320' => 'csa', 'CsaV3_2G008480' => 'csa', 'CsaV3_2G033450' => 'csa', 'CsaV3_3G044830' => 'csa', 'CsaV3_4G033710' => 'csa', 'CsaV3_6G051730' => 'csa', 'CsaV3_7G025350' => 'csa', 'CSS0001067' => 'camsi', 'CSS0005996' => 'camsi', 'CSS0006590' => 'camsi', 'CSS0009673' => 'camsi', 'CSS0010201' => 'camsi', 'CSS0010549' => 'camsi', 'CSS0011364' => 'camsi', 'CSS0014473' => 'camsi', 'CSS0014961' => 'camsi', 'CSS0020191' => 'camsi', 'CSS0021165' => 'camsi', 'CSS0022306' => 'camsi', 'CSS0030591' => 'camsi', 'CSS0030696' => 'camsi', 'CSS0032653' => 'camsi', 'CSS0037487' => 'camsi', 'CSS0041102' => 'camsi', 'CSS0041261' => 'camsi', 'CSS0046246' => 'camsi', 'CSS0049256' => 'camsi', 'DCAR_004075' => 'dca', 'DCAR_011538' => 'dca', 'DCAR_019553' => 'dca', 'DCAR_020952' => 'dca', 'DCAR_021739' => 'dca', 'DCAR_027407' => 'dca', 'DCAR_027913' => 'dca', 'DCAR_028066' => 'dca', 'Dinv05899' => 'din', 'Dinv07563' => 'din', 'Dinv08010' => 'din', 'Dinv14125' => 'din', 'Dinv20172' => 'din', 'Dinv30743' => 'din', 'Dinv31229' => 'din', 'Dinv34162' => 'din', 'Dinv36028' => 'din', 'Dinv39368' => 'din', 'Dinv40565' => 'din', 'Dinv41706' => 'din', 'Duzib052G0089' => 'dzi', 'Duzib116G0641' => 'dzi', 'Duzib132G0069' => 'dzi', 'Duzib132G1219' => 'dzi', 'Duzib147G0278' => 'dzi', 'Duzib160G0480' => 'dzi', 'Duzib170G0661' => 'dzi', 'Duzib177G0591' => 'dzi', 'Duzib187G1353' => 'dzi', 'Duzib192G0858' => 'dzi', 'Duzib192G0883' => 'dzi', 'Duzib213G0506' => 'dzi', 'Duzib235G0289' => 'dzi', 'Duzib251G0422' => 'dzi', 'ECA232G3898' => 'eca', 'ECA233G5950' => 'eca', 'ECA234G1699' => 'eca', 'ECA234G2421' => 'eca', 'ECA236G0426' => 'eca', 'ECA236G4331' => 'eca', 'ECA248G2573' => 'eca', 'EL10Ac1g00077' => 'bvu', 'EL10Ac1g01746' => 'bvu', 'EL10Ac2g03464' => 'bvu', 'EL10Ac4g08176' => 'bvu', 'EL10Ac7g17521' => 'bvu', 'EL10Ac8g20386' => 'bvu', 'EL10Ac9g21343' => 'bvu', 'EL10Ac9g22688' => 'bvu', 'Eucgr.B03434' => 'egr', 'Eucgr.D00618' => 'egr', 'Eucgr.E02395' => 'egr', 'Eucgr.F01129' => 'egr', 'Eucgr.F02622' => 'egr', 'Eucgr.F04207' => 'egr', 'FAN01G0570' => 'fan', 'FAN03G3351' => 'fan', 'FAN06G3702' => 'fan', 'FAN07G2149' => 'fan', 'FAN10G3758' => 'fan', 'FAN11G1170' => 'fan', 'FAN11G2050' => 'fan', 'FAN11G2724' => 'fan', 'FAN12G1700' => 'fan', 'FAN12G2028' => 'fan', 'FAN15G1160' => 'fan', 'FAN15G3063' => 'fan', 'FAN16G2540' => 'fan', 'FAN16G3077' => 'fan', 'FAN16G3624' => 'fan', 'FAN17G0221' => 'fan', 'FAN20G2492' => 'fan', 'FAN20G2905' => 'fan', 'FAN21G0548' => 'fan', 'FAN21G1300' => 'fan', 'FAN22G0077' => 'fan', 'FAN22G1315' => 'fan', 'FAN24G1280' => 'fan', 'FAN24G1445' => 'fan', 'FAN24G3527' => 'fan', 'FAN25G0464' => 'fan', 'FAN25G2885' => 'fan', 'FAN25G3270' => 'fan', 'FAN27G1101' => 'fan', 'FAN27G2846' => 'fan', 'FAN27G3524' => 'fan', 'FvH4_2g11770' => 'fve', 'FvH4_2g15630' => 'fve', 'FvH4_3g05570' => 'fve', 'FvH4_3g09110' => 'fve', 'FvH4_3g19940' => 'fve', 'FvH4_4g04821' => 'fve', 'FvH4_4g31480' => 'fve', 'FvH4_7g01740' => 'fve', 'Glyma.05G130400' => 'gma', 'Glyma.05G156400' => 'gma', 'Glyma.07G197000' => 'gma', 'Glyma.08G085151' => 'gma', 'Glyma.08G114500' => 'gma', 'Glyma.08G300400' => 'gma', 'Glyma.10G215800' => 'gma', 'Glyma.12G224400' => 'gma', 'Glyma.13G179300' => 'gma', 'Glyma.13G218151' => 'gma', 'Glyma.13G238800' => 'gma', 'Glyma.13G276900' => 'gma', 'Glyma.14G078200' => 'gma', 'Glyma.15G074500' => 'gma', 'Glyma.15G094100' => 'gma', 'Glyma.17G247200' => 'gma', 'Glyma.18G120100' => 'gma', 'Glyma.20G176000' => 'gma', 'Gohir.A01G063600' => 'ghi', 'Gohir.A01G170301' => 'ghi', 'Gohir.A02G060500' => 'ghi', 'Gohir.A05G133850' => 'ghi', 'Gohir.A05G161400' => 'ghi', 'Gohir.A06G012900' => 'ghi', 'Gohir.A06G035901' => 'ghi', 'Gohir.A06G127100' => 'ghi', 'Gohir.A06G210500' => 'ghi', 'Gohir.A08G008650' => 'ghi', 'Gohir.A09G072700' => 'ghi', 'Gohir.A09G088301' => 'ghi', 'Gohir.A10G040600' => 'ghi', 'Gohir.A12G036300' => 'ghi', 'Gohir.A12G143350' => 'ghi', 'Gohir.A12G165500' => 'ghi', 'Gohir.A13G145700' => 'ghi', 'Gohir.D01G050000' => 'ghi', 'Gohir.D01G051366' => 'ghi', 'Gohir.D01G161350' => 'ghi', 'Gohir.D02G065900' => 'ghi', 'Gohir.D05G164200' => 'ghi', 'Gohir.D05G355500' => 'ghi', 'Gohir.D06G010400' => 'ghi', 'Gohir.D06G111250' => 'ghi', 'Gohir.D06G132000' => 'ghi', 'Gohir.D06G210500' => 'ghi', 'Gohir.D07G165675' => 'ghi', 'Gohir.D08G062240' => 'ghi', 'Gohir.D08G086101' => 'ghi', 'Gohir.D08G138060' => 'ghi', 'Gohir.D09G072300' => 'ghi', 'Gohir.D10G041400' => 'ghi', 'Gohir.D11G191020' => 'ghi', 'Gohir.D11G212066' => 'ghi', 'Gohir.D12G036300' => 'ghi', 'Gohir.D12G168600' => 'ghi', 'Gohir.D13G150600' => 'ghi', 'Gorai.001G057300' => 'gra', 'Gorai.002G069900' => 'gra', 'Gorai.002G200000' => 'gra', 'Gorai.003G067600' => 'gra', 'Gorai.005G074800' => 'gra', 'Gorai.006G087300' => 'gra', 'Gorai.008G037500' => 'gra', 'Gorai.008G181400' => 'gra', 'Gorai.009G169400' => 'gra', 'Gorai.009G387900' => 'gra', 'Gorai.010G013300' => 'gra', 'Gorai.010G153800' => 'gra', 'Gorai.010G255800' => 'gra', 'Gorai.011G043700' => 'gra', 'Gorai.011G198900' => 'gra', 'Gorai.013G168400' => 'gra', 'GSVIVG01005212001' => 'vvi', 'GSVIVG01006163001' => 'vvi', 'GSVIVG01009625001' => 'vvi', 'GSVIVG01014338001' => 'vvi', 'GSVIVG01020005001' => 'vvi', 'GSVIVG01021450001' => 'vvi', 'GSVIVG01023975001' => 'vvi', 'GSVIVG01034490001' => 'vvi', 'HanXRQChr04g0112071' => 'han', 'HanXRQChr05g0131151' => 'han', 'HanXRQChr09g0262371' => 'han', 'HanXRQChr09g0268401' => 'han', 'HanXRQChr10g0279241' => 'han', 'HanXRQChr10g0297961' => 'han', 'HanXRQChr11g0326231' => 'han', 'HanXRQChr11g0328471' => 'han', 'HanXRQChr16g0507941' => 'han', 'HanXRQChr17g0560211' => 'han', 'Haze_02108' => 'cav', 'Haze_02428' => 'cav', 'Haze_05593' => 'cav', 'Haze_06448' => 'cav', 'Haze_09427' => 'cav', 'Haze_12022' => 'cav', 'Haze_17612' => 'cav', 'Haze_17928' => 'cav', 'Hma1.2p1_0032F.1_g019250' => 'hma', 'Hma1.2p1_0163F.1_g072690' => 'hma', 'Hma1.2p1_0265F.1_g106710' => 'hma', 'Hma1.2p1_0286F.1_g113970' => 'hma', 'Hma1.2p1_0363F.1_g136640' => 'hma', 'Hma1.2p1_0584F.1_g183470' => 'hma', 'Hma1.2p1_0885F.1_g232570' => 'hma', 'HPP92_006022' => 'vpl', 'HPP92_007320' => 'vpl', 'HPP92_011521' => 'vpl', 'HPP92_019387' => 'vpl', 'HPP92_024038' => 'vpl', 'Hund05891' => 'sun', 'Hund06450' => 'sun', 'Hund12053' => 'sun', 'Hund16800' => 'sun', 'Hund21222' => 'sun', 'Hund22896' => 'sun', 'Hund23746' => 'sun', 'Hund27083' => 'sun', 'Lalb_Chr02g0141831' => 'lal', 'Lalb_Chr02g0141841' => 'lal', 'Lalb_Chr05g0220411' => 'lal', 'Lalb_Chr06g0162081' => 'lal', 'Lalb_Chr09g0327651' => 'lal', 'Lalb_Chr13g0295051' => 'lal', 'Lalb_Chr15g0086801' => 'lal', 'Lalb_Chr16g0383781' => 'lal', 'Lalb_Chr16g0383791' => 'lal', 'Lalb_Chr18g0055441' => 'lal', 'Lalb_Chr18g0059611' => 'lal', 'Lalb_Chr20g0109661' => 'lal', 'Lalb_Chr20g0109831' => 'lal', 'Lalb_Chr20g0121871' => 'lal', 'Lalb_Chr22g0355361' => 'lal', 'Lalb_Chr25g0286371' => 'lal', 'Lj1A1187G43' => 'lonja', 'Lj1A1205T50' => 'lonja', 'Lj1A800G33' => 'lonja', 'Lj1C1187T7' => 'lonja', 'Lj1C843T11' => 'lonja', 'Lj1g0010940' => 'lja', 'Lj2A288T69' => 'lonja', 'Lj3g0024276' => 'lja', 'Lj4A47T76' => 'lonja', 'Lj4g0005805' => 'lja', 'Lj4g0006097' => 'lja', 'Lj4g0008528' => 'lja', 'Lj4g0024907' => 'lja', 'Lj5g0012472' => 'lja', 'Lj5g0018648' => 'lja', 'Lj6C789G1' => 'lonja', 'Lj6g0004000' => 'lja', 'Lj7A292G67' => 'lonja', 'Lj7A292T64' => 'lonja', 'Lj9A400T58' => 'lonja', 'Lsat_1_v5_gn_1_126181' => 'lsa', 'Lsat_1_v5_gn_4_123041' => 'lsa', 'Lsat_1_v5_gn_4_133620' => 'lsa', 'Lsat_1_v5_gn_4_53221' => 'lsa', 'Lsat_1_v5_gn_4_71961' => 'lsa', 'Lsat_1_v5_gn_7_105241' => 'lsa', 'Lsat_1_v5_gn_7_21361' => 'lsa', 'Lsat_1_v5_gn_7_28860' => 'lsa', 'Lsat_1_v5_gn_7_31260' => 'lsa', 'Lsat_1_v5_gn_8_52801' => 'lsa', 'Manes.02G191400' => 'mes', 'Manes.03G110100' => 'mes', 'Manes.04G071100' => 'mes', 'Manes.05G100500' => 'mes', 'Manes.05G164700' => 'mes', 'Manes.15G087000' => 'mes', 'Manes.15G121500' => 'mes', 'Manes.16G028300' => 'mes', 'Manes.17G046100' => 'mes', 'Manes.17G069800' => 'mes', 'Manes.18G100500' => 'mes', 'Mapoly0002s0109' => 'mpo', 'Mapoly0024s0007' => 'mpo', 'Mapoly0089s0032' => 'mpo', 'MBI04_g42241_MAGBIO' => 'mbi', 'MBI05_g11988_MAGBIO' => 'mbi', 'MBI05_g35452_MAGBIO' => 'mbi', 'MBI07_g30179_MAGBIO' => 'mbi', 'MBI07_g35859_MAGBIO' => 'mbi', 'MBI07_g35860_MAGBIO' => 'mbi', 'MBI07_g37166_MAGBIO' => 'mbi', 'MBI08_g18172_MAGBIO' => 'mbi', 'MBI09_g08441_MAGBIO' => 'mbi', 'MBI13_g01676_MAGBIO' => 'mbi', 'MBI14_g42955_MAGBIO' => 'mbi', 'MBI16_g13161_MAGBIO' => 'mbi', 'MBI17_g27204_MAGBIO' => 'mbi', 'MBI19_g21595_MAGBIO' => 'mbi', 'MD00G1148400' => 'mdo', 'MD02G1301200' => 'mdo', 'MD03G1227800' => 'mdo', 'MD05G1041100' => 'mdo', 'MD05G1124800' => 'mdo', 'MD05G1284000' => 'mdo', 'MD05G1338800' => 'mdo', 'MD05G1338900' => 'mdo', 'MD07G1022800' => 'mdo', 'MD10G1047500' => 'mdo', 'MD10G1127500' => 'mdo', 'MD10G1262300' => 'mdo', 'MD10G1293800' => 'mdo', 'MD16G1074300' => 'mdo', 'Medtr1g021670' => 'mtr', 'Medtr1g096320' => 'mtr', 'Medtr2g013690' => 'mtr', 'Medtr2g019450' => 'mtr', 'Medtr2g085170' => 'mtr', 'Medtr4g088785' => 'mtr', 'Medtr8g055930' => 'mtr', 'Medtr8g085850' => 'mtr', 'MELO3C002605.2' => 'cme', 'MELO3C003891.2' => 'cme', 'MELO3C004012.2' => 'cme', 'MELO3C007134.2' => 'cme', 'MELO3C008118.2' => 'cme', 'MELO3C016700.2' => 'cme', 'MELO3C024127.2' => 'cme', 'MELO3C033361.2' => 'cme', 'MELO3C033362.2' => 'cme', 'Migut.C00430' => 'egut', 'Migut.C01246' => 'egut', 'Migut.E00101' => 'egut', 'Migut.H01486' => 'egut', 'Migut.H01939' => 'egut', 'Migut.K00360' => 'egut', 'Migut.M00910' => 'egut', 'Migut.M01139' => 'egut', 'Migut.N02677' => 'egut', 'MSTRG.13252' => 'ama', 'MSTRG.14701' => 'ama', 'MSTRG.1521' => 'ama', 'MSTRG.15884' => 'ama', 'MSTRG.16242' => 'ama', 'MSTRG.22285' => 'ama', 'MSTRG.22444' => 'ama', 'MSTRG.2349' => 'ama', 'MSTRG.26308' => 'ama', 'MSTRG.28296' => 'ama', 'MSTRG.9895' => 'ama', 'Nitab4.5_0000110g0060' => 'nta', 'Nitab4.5_0000420g0130' => 'nta', 'Nitab4.5_0000422g0030' => 'nta', 'Nitab4.5_0000560g0180' => 'nta', 'Nitab4.5_0000703g0100' => 'nta', 'Nitab4.5_0000786g0200' => 'nta', 'Nitab4.5_0001336g0020' => 'nta', 'Nitab4.5_0001796g0030' => 'nta', 'Nitab4.5_0003348g0060' => 'nta', 'Nitab4.5_0003698g0040' => 'nta', 'Nitab4.5_0003942g0090' => 'nta', 'Nitab4.5_0004775g0070' => 'nta', 'Nitab4.5_0004864g0030' => 'nta', 'Nitab4.5_0005615g0020' => 'nta', 'Nitab4.5_0009288g0030' => 'nta', 'Nitab4.5_0009341g0010' => 'nta', 'Nitab4.5_0009535g0010' => 'nta', 'Nn1g03995' => 'nnu', 'Nn1g04100' => 'nnu', 'Nn1g06530' => 'nnu', 'Nn3g16404' => 'nnu', 'Nn3g17212' => 'nnu', 'Nn3g20776' => 'nnu', 'Nn3g21923' => 'nnu', 'Nn5g27737' => 'nnu', 'Nn5g29461' => 'nnu', 'Nn7g38355' => 'nnu', 'Nn8g39873' => 'nnu', 'Oeu000548.2' => 'oeu', 'Oeu004672.1' => 'oeu', 'Oeu015605.2' => 'oeu', 'Oeu016092.1' => 'oeu', 'Oeu017879.3' => 'oeu', 'Oeu024910.1' => 'oeu', 'Oeu028965.1' => 'oeu', 'Oeu031269.1' => 'oeu', 'Oeu031270.1' => 'oeu', 'Oeu032535.1' => 'oeu', 'Oeu034151.1' => 'oeu', 'Oeu034152.1' => 'oeu', 'Oeu034588.2' => 'oeu', 'Oeu050846.1' => 'oeu', 'Oeu050849.2' => 'oeu', 'Oeu051063.2' => 'oeu', 'Oeu052368.1' => 'oeu', 'Oeu052370.1' => 'oeu', 'Os01g0210400' => 'osa', 'Os01g0304300' => 'osa', 'Os01g0749100' => 'osa', 'Os02g0745800' => 'osa', 'Os03g0769050' => 'osa', 'Os05g0531500' => 'osa', 'Os06g0724300' => 'osa', 'Os11g0198100' => 'osa', 'Peaxi162Scf00069g01425' => 'pax', 'Peaxi162Scf00280g00811' => 'pax', 'Peaxi162Scf00310g00615' => 'pax', 'Peaxi162Scf00362g00542' => 'pax', 'Peaxi162Scf00461g00310' => 'pax', 'Peaxi162Scf00530g00118' => 'pax', 'Peaxi162Scf00541g00057' => 'pax', 'Peaxi162Scf00661g00017' => 'pax', 'Peaxi162Scf00926g00027' => 'pax', 'Peaxi162Scf01064g00263' => 'pax', 'Peaxi162Scf01211g00135' => 'pax', 'PGR004G2336' => 'pgr', 'PGR042G0327' => 'pgr', 'PGR042G1957' => 'pgr', 'PGR042G2003' => 'pgr', 'PGR042G3929' => 'pgr', 'PGR083G1137' => 'pgr', 'PGR083G1364' => 'pgr', 'PGSC0003DMG400003381' => 'stu', 'PGSC0003DMG400003417' => 'stu', 'PGSC0003DMG400008981' => 'stu', 'PGSC0003DMG400012417' => 'stu', 'PGSC0003DMG400012823' => 'stu', 'PGSC0003DMG400016885' => 'stu', 'PGSC0003DMG400022812' => 'stu', 'PGSC0003DMG400029726' => 'stu', 'PGSC0003DMG401009243' => 'stu', 'PGSC0003DMG401031505' => 'stu', 'PGSC0003DMG402031505' => 'stu', 'Phvul.001G017600' => 'pvu', 'Phvul.002G193500' => 'pvu', 'Phvul.002G228900' => 'pvu', 'Phvul.002G236800' => 'pvu', 'Phvul.003G049500' => 'pvu', 'Phvul.005G072000' => 'pvu', 'Phvul.006G164800' => 'pvu', 'Phvul.006G185100' => 'pvu', 'Phvul.007G090000' => 'pvu', 'Potri.001G399800' => 'ptr', 'Potri.002G149900' => 'ptr', 'Potri.004G044100' => 'ptr', 'Potri.004G177600' => 'ptr', 'Potri.009G138000' => 'ptr', 'Potri.010G094000' => 'ptr', 'Potri.011G053000' => 'ptr', 'Potri.011G119300' => 'ptr', 'Potri.013G113700' => 'ptr', 'Potri.018G107800' => 'ptr', 'Potri.019G084100' => 'ptr', 'Pp3c14_23720' => 'ppa', 'Pp3c16_6340' => 'ppa', 'Pp3c23_13420' => 'ppa', 'Pp3c24_2740' => 'ppa', 'Pp3c25_860' => 'ppa', 'Pp3c8_21750' => 'ppa', 'Prupe.1G273000' => 'ppe', 'Prupe.1G273700' => 'ppe', 'Prupe.1G274100' => 'ppe', 'Prupe.2G023300' => 'ppe', 'Prupe.4G048000' => 'ppe', 'Prupe.4G080400' => 'ppe', 'Prupe.4G181200' => 'ppe', 'Prupe.8G056900' => 'ppe', 'Prupe.8G168700' => 'ppe', 'Psat1g189080' => 'psa', 'Psat1g204760' => 'psa', 'Psat4g175560' => 'psa', 'Psat4g177720' => 'psa', 'Psat5g244240' => 'psa', 'Psat6g010720' => 'psa', 'Psat6g187200' => 'psa', 'Psat7g072040' => 'psa', 'PSO017G3501' => 'pso', 'PSO063G2148' => 'pso', 'PSO063G5608' => 'pso', 'PSO210G6392' => 'pso', 'PSO541G2319' => 'pso', 'PSO541G2836' => 'pso', 'PSO541G4012' => 'pso', 'PSO541G6253' => 'pso', 'PSO675G0580' => 'pso', 'PSO675G0856' => 'pso', 'PSO675G5635' => 'pso', 'PSO675G9157' => 'pso', 'PSO832G1660' => 'pso', 'PSO832G1969' => 'pso', 'QL02p007186' => 'qlo', 'QL02p033904' => 'qlo', 'QL03p064391' => 'qlo', 'QL05p040593' => 'qlo', 'QL05p058242' => 'qlo', 'QL08p021825' => 'qlo', 'QL11p004981' => 'qlo', 'RcHm_v2.0_Chr1g0318301' => 'rch', 'RcHm_v2.0_Chr4g0418501' => 'rch', 'RcHm_v2.0_Chr4g0439971' => 'rch', 'RcHm_v2.0_Chr5g0008541' => 'rch', 'RcHm_v2.0_Chr5g0014101' => 'rch', 'RcHm_v2.0_Chr5g0014131' => 'rch', 'RcHm_v2.0_Chr5g0033621' => 'rch', 'RcHm_v2.0_Chr6g0272041' => 'rch', 'RcHm_v2.0_Chr6g0278831' => 'rch', 'Rhsim02G0130400' => 'rsi', 'Rhsim02G0171100' => 'rsi', 'Rhsim05G0053000' => 'rsi', 'Rhsim05G0053100' => 'rsi', 'Rhsim06G0096500' => 'rsi', 'Rhsim06G0096600' => 'rsi', 'Rhsim06G0199100' => 'rsi', 'Rhsim12G0062300' => 'rsi', 'Rhsim12G0062800' => 'rsi', 'Sabra02G0118600' => 'sbr', 'Sabra04G0027300' => 'sbr', 'Sabra04G0119500' => 'sbr', 'Sabra08G0112500' => 'sbr', 'Sabra11G0036800' => 'sbr', 'Sabra11G0103800' => 'sbr', 'Sabra13G0096300' => 'sbr', 'Sabra16G0262300' => 'sbr', 'Sabra18G0091700' => 'sbr', 'Sabra19G0095400' => 'sbr', 'SalBow6G3080' => 'sbo', 'SalBow7G1157' => 'sbo', 'SalBow7G2123' => 'sbo', 'SalBow7G2285' => 'sbo', 'SalBow7G3537' => 'sbo', 'SalBow8G2947' => 'sbo', 'SalBow8G4463' => 'sbo', 'SalBow8G5466' => 'sbo', 'Sc01g0001750' => 'sci', 'Sc02g0006640' => 'sci', 'Sc02g0006670' => 'sci', 'Sc04g0008220' => 'sci', 'Sc05g0006190' => 'sci', 'Sc08g0002760' => 'sci', 'Sc17g0006170' => 'sci', 'Sc22g0002050' => 'sci', 'Sc23g0001190' => 'sci', 'Sc24g0000980' => 'sci', 'Sed0006245' => 'sed', 'Sed0007543' => 'sed', 'Sed0009411' => 'sed', 'Sed0010765' => 'sed', 'Sed0012944' => 'sed', 'Sed0014682' => 'sed', 'Sed0016174' => 'sed', 'Sed0016796' => 'sed', 'Sed0020317' => 'sed', 'Sed0021467' => 'sed', 'SEGI_01316' => 'sgi', 'SEGI_03374' => 'sgi', 'SEGI_16265' => 'sgi', 'SEGI_18569' => 'sgi', 'SEGI_20351' => 'sgi', 'SEGI_26395' => 'sgi', 'SEGI_29469' => 'sgi', 'SEGI_34771' => 'sgi', 'SEGI_36769' => 'sgi', 'SEGI_37139' => 'sgi', 'SGA_v2.0_scaffold100G29687' => 'sas', 'SGA_v2.0_scaffold118G32472' => 'sas', 'SGA_v2.0_scaffold14G07051' => 'sas', 'SGA_v2.0_scaffold183G39845' => 'sas', 'SGA_v2.0_scaffold1G00174' => 'sas', 'SGA_v2.0_scaffold22G09714' => 'sas', 'SGA_v2.0_scaffold333G48992' => 'sas', 'SGA_v2.0_scaffold46G17491' => 'sas', 'SGA_v2.0_scaffold49G18294' => 'sas', 'SGA_v2.0_scaffold63G21658' => 'sas', 'SHI01741' => 'shi', 'SHI05771' => 'shi', 'SHI18077' => 'shi', 'SHI20525' => 'shi', 'SHI20527' => 'shi', 'SHI20528' => 'shi', 'SMO172G0185' => 'smo', 'SMO198G0020' => 'smo', 'SMO351G0006' => 'smo', 'SMO356G0118' => 'smo', 'SMO358G0296' => 'smo', 'SMO367G0079' => 'smo', 'SMO367G1277' => 'smo', 'Solyc01g014220.3' => 'sly', 'Solyc01g111770.2' => 'sly', 'Solyc02g078180.3' => 'sly', 'Solyc03g006430.3' => 'sly', 'Solyc03g006456.1' => 'sly', 'Solyc03g079860.2' => 'sly', 'Solyc04g079770.3' => 'sly', 'Solyc05g007430.4' => 'sly', 'Solyc07g063150.3' => 'sly', 'Solyc08g016620.3' => 'sly', 'Solyc09g057590.3' => 'sly', 'Solyc09g057600.1' => 'sly', 'Solyc10g009050.3' => 'sly', 'Solyc11g017420.2' => 'sly', 'Sopen01g053810' => 'spe', 'Sopen02g023040' => 'spe', 'Sopen03g002440' => 'spe', 'Sopen04g033350' => 'spe', 'Sopen05g003310' => 'spe', 'Sopen07g004050' => 'spe', 'Sopen07g031340' => 'spe', 'Sopen08g006990' => 'spe', 'Sopen10g004830' => 'spe', 'Sopen11g009370' => 'spe', 'Sp1g24450' => 'spa', 'Sp1g29670' => 'spa', 'Sp1g39600' => 'spa', 'Sp2g11080' => 'spa', 'Sp2g13970' => 'spa', 'Sp4g16130' => 'spa', 'Sp6g13080' => 'spa', 'Sp7g37270' => 'spa', 'TAR371G0065' => 'tar', 'TAR376G0340' => 'tar', 'TAR376G0435' => 'tar', 'TAR381G0002' => 'tar', 'TAR381G1236' => 'tar', 'TAR624G0055' => 'tar', 'TAR624G0324' => 'tar', 'TAR624G0696' => 'tar', 'TAR624G0906' => 'tar', 'TAR625G0107' => 'tar', 'TAR626G0015' => 'tar', 'TAR626G1356' => 'tar', 'TAR627G0888' => 'tar', 'TAR628G0399' => 'tar', 'TAR628G1327' => 'tar', 'TAR629G2831' => 'tar', 'TAR629G2874' => 'tar', 'TAR633G1432' => 'tar', 'TAR633G2771' => 'tar', 'THA.LOC104803394' => 'tha', 'THA.LOC104805153' => 'tha', 'THA.LOC104806784' => 'tha', 'THA.LOC104810473' => 'tha', 'THA.LOC104813100' => 'tha', 'THA.LOC104814215' => 'tha', 'THA.LOC104815554' => 'tha', 'THA.LOC104820544' => 'tha', 'THA.LOC104824754' => 'tha', 'THA.LOC104827717' => 'tha', 'Thecc.02G031400' => 'tca', 'Thecc.02G055900' => 'tca', 'Thecc.02G350800' => 'tca', 'Thecc.06G150900' => 'tca', 'Thecc.06G186600' => 'tca', 'Thecc.07G089600' => 'tca', 'Thecc.08G020400' => 'tca', 'Thecc.08G182100' => 'tca', 'Thhalv10000873m.g' => 'esa', 'Thhalv10004185m.g' => 'esa', 'Thhalv10006981m.g' => 'esa', 'Thhalv10007204m.g' => 'esa', 'Thhalv10011374m.g' => 'esa', 'Thhalv10013482m.g' => 'esa', 'Thhalv10017801m.g' => 'esa', 'Thhalv10024983m.g' => 'esa', 'TPR.G12072' => 'tpr', 'TPR.G15769' => 'tpr', 'TPR.G16504' => 'tpr', 'TPR.G16506' => 'tpr', 'TPR.G24345' => 'tpr', 'TPR.G26666' => 'tpr', 'TPR.G27320' => 'tpr', 'TPR.G31819' => 'tpr', 'TPR.G38879' => 'tpr', 'TPR.G39015' => 'tpr', 'TPR.G8819' => 'tpr', 'TWI09G0924' => 'twi', 'TWI12G0811' => 'twi', 'TWI12G1294' => 'twi', 'TWI31G0150' => 'twi', 'TWI36G1262' => 'twi', 'TWI38G1287' => 'twi', 'TWI38G1633' => 'twi', 'TWI38G1982' => 'twi', 'TWI39G0116' => 'twi', 'TWI60G1011' => 'twi', 'TWI63G0171' => 'twi', 'TWI73G0839' => 'twi', 'TWI79G1511' => 'twi', 'unitig_0.g915' => 'ugi', 'unitig_0.g916' => 'ugi', 'unitig_21.g20219' => 'ugi', 'unitig_21.g20416' => 'ugi', 'unitig_578.g16132' => 'ugi', 'unitig_578.g16718' => 'ugi', 'unitig_62.g23481' => 'ugi', 'unitig_744.g24535' => 'ugi', 'unitig_749.g13525' => 'ugi', 'vmacro01248' => 'vma', 'vmacro02290' => 'vma', 'vmacro10946' => 'vma', 'vmacro11865' => 'vma', 'vmacro12493' => 'vma', 'vmacro17322' => 'vma', 'vmacro21599' => 'vma', 'vmacro23041' => 'vma', 'VMungo0251G0004' => 'vmu', 'VMungo0251G2639' => 'vmu', 'VMungo0251G2967' => 'vmu', 'VMungo0540G0864' => 'vmu', 'VMungo0540G1569' => 'vmu', 'VMungo0647G0317' => 'vmu', 'VMungo0720G1373' => 'vmu', 'VMungo0720G1508' => 'vmu', 'VMungo1080G0485' => 'vmu', 'VMungo1215G3177' => 'vmu', 'Zm00001eb112600' => 'zma', 'Zm00001eb120220' => 'zma', 'Zm00001eb153240' => 'zma', 'Zm00001eb168880' => 'zma', 'Zm00001eb213920' => 'zma', 'Zm00001eb228280' => 'zma', 'Zm00001eb254580' => 'zma', 'Zm00001eb272180' => 'zma', 'Zm00001eb293190' => 'zma', 'Zm00001eb322930' => 'zma', 'Zm00001eb353360' => 'zma', 'Zm00001eb353390' => 'zma', 'Zm00001eb353430' => 'zma', 'Zm00001eb353440' => 'zma', 'Zm00001eb353780' => 'zma' ), 'gf_id' => 'HOM05D000499', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000499' ), 'data_identifier' => 'HOM05D000499', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000499', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1066', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p29780' => 'bna', 'A02p33180' => 'bna', 'A03p16470' => 'bna', 'A03p66010' => 'bna', 'A04p25970' => 'bna', 'A06p01270' => 'bna', 'A06p46080' => 'bna', 'A07p11400' => 'bna', 'A08p01840' => 'bna', 'A08p08230' => 'bna', 'A08p25740' => 'bna', 'A09p32070' => 'bna', 'A09p37830' => 'bna', 'A09p42840' => 'bna', 'A09p42850' => 'bna', 'Aa31LG10G2060' => 'aar', 'Aa31LG2G7410' => 'aar', 'Aa31LG6G10200' => 'aar', 'Aa31LG6G16680' => 'aar', 'Aa31LG6G8470' => 'aar', 'Aa31LG9G12730' => 'aar', 'Aa31LG9G13680' => 'aar', 'Aa31LG9G14920' => 'aar', 'Aa31LG9G6650' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4977' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5467' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3254' => 'aag', 'Actinidia02578' => 'ach', 'Actinidia07693' => 'ach', 'Actinidia08413' => 'ach', 'Actinidia08414' => 'ach', 'Actinidia15289' => 'ach', 'Actinidia19871' => 'ach', 'Actinidia21475' => 'ach', 'Actinidia22576' => 'ach', 'Actinidia28327' => 'ach', 'Actinidia32491' => 'ach', 'Actinidia39463' => 'ach', 'Actinidia39571' => 'ach', 'Ah.01g013750' => 'amhyb', 'Ah.01g023210' => 'amhyb', 'Ah.04g164850' => 'amhyb', 'Ah.05g178060' => 'amhyb', 'Ah.07g204270' => 'amhyb', 'Ah.07g208480' => 'amhyb', 'Ah.09g237410' => 'amhyb', 'Ah.14g089460' => 'amhyb', 'AL1G41790' => 'aly', 'AL1G49050' => 'aly', 'AL1G53810' => 'aly', 'AL1G61400' => 'aly', 'AL4G18580' => 'aly', 'AL5G12510' => 'aly', 'AL5G12540' => 'aly', 'AL6G43230' => 'aly', 'AL7G10370' => 'aly', 'AL7G19250' => 'aly', 'AL8G12240' => 'aly', 'AL8G18540' => 'aly', 'Aqoxy1G02409' => 'aox', 'Aqoxy2G03993' => 'aox', 'Aqoxy3G03357' => 'aox', 'Aqoxy4G00785' => 'aox', 'Aqoxy5G02598' => 'aox', 'Aqoxy6G00132' => 'aox', 'Aqoxy7G01776' => 'aox', 'Aqoxy7G02316' => 'aox', 'Aqoxy7G03973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.12AFKW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B8730' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27IQR1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3F75VG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3RE0GA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41TCQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.527VTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FIR39' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5W8UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DA38EV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ63HS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H1I32C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HC27T5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4M8AP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7N3CZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9UVDZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LS1NQA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT1D4B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SKC4TM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCFV76' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF9Q1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQWD9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1ZM88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WE07RT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YCK7VH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJE6Q6' => 'arhy', 'AT1G28240' => 'ath', 'AT1G34550' => 'ath', 'AT1G53040' => 'ath', 'AT2G02910' => 'ath', 'AT4G09630' => 'ath', 'AT4G38500' => 'ath', 'AT5G42660' => 'ath', 'AT5G46220' => 'ath', 'ATR0152G026' => 'atr', 'ATR0564G343' => 'atr', 'ATR0706G151' => 'atr', 'ATR0733G207' => 'atr', 'ATR0751G234' => 'atr', 'ATR0807G048' => 'atr', 'ATR1091G084' => 'atr', 'Atru.chr10.1229' => 'acertr', 'Atru.chr10.1230' => 'acertr', 'Atru.chr10.1874' => 'acertr', 'Atru.chr11.1808' => 'acertr', 'Atru.chr13.1795' => 'acertr', 'Atru.chr13.570' => 'acertr', 'Atru.chr2.2608' => 'acertr', 'Atru.chr2.2609' => 'acertr', 'Atru.chr5.3428' => 'acertr', 'Atru.chr8.1171' => 'acertr', 'AUR62004651' => 'cqu', 'AUR62008675' => 'cqu', 'AUR62010014' => 'cqu', 'AUR62013004' => 'cqu', 'AUR62014825' => 'cqu', 'AUR62015015' => 'cqu', 'AUR62015151' => 'cqu', 'AUR62017020' => 'cqu', 'AUR62019422' => 'cqu', 'AUR62023570' => 'cqu', 'AUR62025571' => 'cqu', 'AUR62029098' => 'cqu', 'AUR62033863' => 'cqu', 'AUR62034296' => 'cqu', 'AUR62040075' => 'cqu', 'BcaB02g07334' => 'bca', 'BcaB02g10575' => 'bca', 'BcaB03g12119' => 'bca', 'BcaB03g12120' => 'bca', 'BcaB03g13945' => 'bca', 'BcaB04g17123' => 'bca', 'BcaB04g17867' => 'bca', 'BcaB04g19839' => 'bca', 'BcaB07g30317' => 'bca', 'BcaB07g32432' => 'bca', 'BcaB07g33362' => 'bca', 'BcaB08g36611' => 'bca', 'BcaC01g00028' => 'bca', 'BcaC01g01356' => 'bca', 'BcaC01g02034' => 'bca', 'BcaC01g06051' => 'bca', 'BcaC03g16839' => 'bca', 'BcaC03g17176' => 'bca', 'BcaC05g26829' => 'bca', 'BcaC06g31490' => 'bca', 'BcaC06g35344' => 'bca', 'BcaC06g36570' => 'bca', 'BcaC07g37537' => 'bca', 'BcaC08g43491' => 'bca', 'BcaC08g43773' => 'bca', 'BcaNung00234' => 'bca', 'BcaNung01982' => 'bca', 'BcaNung03707' => 'bca', 'BcaNung06454' => 'bca', 'BolC2t10762H' => 'bol', 'BolC2t11191H' => 'bol', 'BolC3t14322H' => 'bol', 'BolC3t19747H' => 'bol', 'BolC3t21425H' => 'bol', 'BolC4t27800H' => 'bol', 'BolC5t31423H' => 'bol', 'BolC6t35951H' => 'bol', 'BolC6t36282H' => 'bol', 'BolC7t40678H' => 'bol', 'BolC7t40679H' => 'bol', 'BolC7t42222H' => 'bol', 'BolC7t43492H' => 'bol', 'BolC7t46785H' => 'bol', 'BolC8t47853H' => 'bol', 'BolC9t56805H' => 'bol', 'BraA02t08000Z' => 'bra', 'BraA02t08341Z' => 'bra', 'BraA03t10936Z' => 'bra', 'BraA03t15657Z' => 'bra', 'BraA04t18100Z' => 'bra', 'BraA05t20523Z' => 'bra', 'BraA06t23353Z' => 'bra', 'BraA06t27473Z' => 'bra', 'BraA06t27769Z' => 'bra', 'BraA07t28928Z' => 'bra', 'BraA08t32236Z' => 'bra', 'BraA08t32841Z' => 'bra', 'BraA08t34524Z' => 'bra', 'BraA09t38742Z' => 'bra', 'BraA09t39295Z' => 'bra', 'C02p47180' => 'bna', 'C02p50990' => 'bna', 'C03p19360' => 'bna', 'C03p74950' => 'bna', 'C03p91000' => 'bna', 'C04p63260' => 'bna', 'C05p27050' => 'bna', 'C06p08750' => 'bna', 'C06p11490' => 'bna', 'C07p02820' => 'bna', 'C07p17180' => 'bna', 'C07p29440' => 'bna', 'C07p63730' => 'bna', 'C09p39260' => 'bna', 'CAN.G1164.34' => 'can', 'CAN.G1164.39' => 'can', 'CAN.G1530.3' => 'can', 'CAN.G162.61' => 'can', 'CAN.G176.6' => 'can', 'CAN.G289.49' => 'can', 'CAN.G370.21' => 'can', 'CAN.G370.22' => 'can', 'CAN.G371.117' => 'can', 'CAN.G58.37' => 'can', 'CAN.G588.98' => 'can', 'CANSAT21G2266' => 'cansat', 'CANSAT25G2799' => 'cansat', 'CANSAT35G0862' => 'cansat', 'CANSAT35G1704' => 'cansat', 'CANSAT35G1760' => 'cansat', 'CANSAT56G3971' => 'cansat', 'CANSAT56G4116' => 'cansat', 'CANSAT80G1259' => 'cansat', 'CARHR027730' => 'chi', 'CARHR033880' => 'chi', 'CARHR043270' => 'chi', 'CARHR145330' => 'chi', 'CARHR145340' => 'chi', 'CARHR175570' => 'chi', 'CARHR181570' => 'chi', 'CARHR258470' => 'chi', 'CARHR260490' => 'chi', 'CARHR294220' => 'chi', 'Carub.0001s2668' => 'cru', 'Carub.0001s3257' => 'cru', 'Carub.0001s4220' => 'cru', 'Carub.0005s0179' => 'cru', 'Carub.0006s2807' => 'cru', 'Carub.0007s0039' => 'cru', 'Carub.0008s0169' => 'cru', 'Carub.0008s0636' => 'cru', 'Ca_00338_v3' => 'car', 'Ca_00542_v3' => 'car', 'Ca_01844_v3' => 'car', 'Ca_10611_v3' => 'car', 'Ca_13326_v3' => 'car', 'Ca_17944_v3' => 'car', 'Ca_18546_v3' => 'car', 'Ca_24219_v3' => 'car', 'Ca_29972_v3' => 'car', 'CBR_g3681' => 'cbr', 'CBR_g40021' => 'cbr', 'Cc01_g08140' => 'ccan', 'Cc02_g13410' => 'ccan', 'Cc02_g37480' => 'ccan', 'Cc05_g12030' => 'ccan', 'Cc09_g03370' => 'ccan', 'Cc09_g10300' => 'ccan', 'Cc10_g03530' => 'ccan', 'Cc10_g11380' => 'ccan', 'CDE01G0176' => 'cde', 'CDE02G0675' => 'cde', 'CDE02G0942' => 'cde', 'CDE02G1153' => 'cde', 'CDE02G4177' => 'cde', 'CDE04G2117' => 'cde', 'CDE04G2736' => 'cde', 'CDE08G1161' => 'cde', 'CDE09G1238' => 'cde', 'Cfa000467' => 'cfa', 'Cfa000947' => 'cfa', 'Cfa004969' => 'cfa', 'Cfa005284' => 'cfa', 'Cfa008993' => 'cfa', 'Cfa018187' => 'cfa', 'Cfa018454' => 'cfa', 'Cfa020585' => 'cfa', 'Ciclev10000424m.g' => 'ccl', 'Ciclev10003605m.g' => 'ccl', 'Ciclev10007828m.g' => 'ccl', 'Ciclev10014620m.g' => 'ccl', 'Ciclev10015169m.g' => 'ccl', 'Ciclev10018291m.g' => 'ccl', 'Ciclev10028256m.g' => 'ccl', 'Ciclev10033822m.g' => 'ccl', 'CiPaw.05G060300' => 'cil', 'CiPaw.05G085000' => 'cil', 'CiPaw.06G083700' => 'cil', 'CiPaw.06G120300' => 'cil', 'CiPaw.09G060500' => 'cil', 'CiPaw.09G123800' => 'cil', 'CiPaw.11G169700' => 'cil', 'CiPaw.12G118300' => 'cil', 'CiPaw.15G071000' => 'cil', 'CiPaw.15G081900' => 'cil', 'ClCG01G024610' => 'cla', 'ClCG03G006070' => 'cla', 'ClCG05G019250' => 'cla', 'ClCG09G009500' => 'cla', 'ClCG11G008200' => 'cla', 'ClCG11G018080' => 'cla', 'COL.COLO4_17373' => 'col', 'COL.COLO4_22994' => 'col', 'COL.COLO4_26389' => 'col', 'COL.COLO4_27170' => 'col', 'COL.COLO4_31074' => 'col', 'COL.COLO4_31465' => 'col', 'COL.COLO4_36438' => 'col', 'COL.COLO4_36439' => 'col', 'Cpa.g.c38781' => 'cpa', 'Cpa.g.sc128.12' => 'cpa', 'Cpa.g.sc166.7' => 'cpa', 'Cpa.g.sc166.8' => 'cpa', 'Cpa.g.sc20.111' => 'cpa', 'Cpa.g.sc27.31' => 'cpa', 'Cpa.g.sc64.36' => 'cpa', 'Cpa.g.sc64.37' => 'cpa', 'Cpa.g.sc66.49' => 'cpa', 'Cpa.g.sc80.64' => 'cpa', 'CsaV3_1G012320' => 'csa', 'CsaV3_2G008480' => 'csa', 'CsaV3_2G033450' => 'csa', 'CsaV3_3G044830' => 'csa', 'CsaV3_4G033710' => 'csa', 'CsaV3_6G051730' => 'csa', 'CsaV3_7G025350' => 'csa', 'CSS0001067' => 'camsi', 'CSS0005996' => 'camsi', 'CSS0006590' => 'camsi', 'CSS0009673' => 'camsi', 'CSS0010201' => 'camsi', 'CSS0010549' => 'camsi', 'CSS0011364' => 'camsi', 'CSS0014473' => 'camsi', 'CSS0014961' => 'camsi', 'CSS0020191' => 'camsi', 'CSS0021165' => 'camsi', 'CSS0022306' => 'camsi', 'CSS0030591' => 'camsi', 'CSS0030696' => 'camsi', 'CSS0032653' => 'camsi', 'CSS0037487' => 'camsi', 'CSS0041102' => 'camsi', 'CSS0041261' => 'camsi', 'CSS0046246' => 'camsi', 'CSS0049256' => 'camsi', 'DCAR_004075' => 'dca', 'DCAR_011538' => 'dca', 'DCAR_019553' => 'dca', 'DCAR_020952' => 'dca', 'DCAR_021739' => 'dca', 'DCAR_027407' => 'dca', 'DCAR_027913' => 'dca', 'DCAR_028066' => 'dca', 'Dinv05899' => 'din', 'Dinv07563' => 'din', 'Dinv08010' => 'din', 'Dinv14125' => 'din', 'Dinv20172' => 'din', 'Dinv30743' => 'din', 'Dinv31229' => 'din', 'Dinv34162' => 'din', 'Dinv36028' => 'din', 'Dinv39368' => 'din', 'Dinv40565' => 'din', 'Dinv41706' => 'din', 'Duzib052G0089' => 'dzi', 'Duzib116G0641' => 'dzi', 'Duzib132G0069' => 'dzi', 'Duzib132G1219' => 'dzi', 'Duzib147G0278' => 'dzi', 'Duzib160G0480' => 'dzi', 'Duzib170G0661' => 'dzi', 'Duzib177G0591' => 'dzi', 'Duzib187G1353' => 'dzi', 'Duzib192G0858' => 'dzi', 'Duzib192G0883' => 'dzi', 'Duzib213G0506' => 'dzi', 'Duzib235G0289' => 'dzi', 'Duzib251G0422' => 'dzi', 'ECA232G3898' => 'eca', 'ECA233G5950' => 'eca', 'ECA234G1699' => 'eca', 'ECA234G2421' => 'eca', 'ECA236G0426' => 'eca', 'ECA236G4331' => 'eca', 'ECA248G2573' => 'eca', 'EL10Ac1g00077' => 'bvu', 'EL10Ac1g01746' => 'bvu', 'EL10Ac2g03464' => 'bvu', 'EL10Ac4g08176' => 'bvu', 'EL10Ac7g17521' => 'bvu', 'EL10Ac8g20386' => 'bvu', 'EL10Ac9g21343' => 'bvu', 'EL10Ac9g22688' => 'bvu', 'Eucgr.B03434' => 'egr', 'Eucgr.D00618' => 'egr', 'Eucgr.E02395' => 'egr', 'Eucgr.F01129' => 'egr', 'Eucgr.F02622' => 'egr', 'Eucgr.F04207' => 'egr', 'FAN01G0570' => 'fan', 'FAN03G3351' => 'fan', 'FAN06G3702' => 'fan', 'FAN07G2149' => 'fan', 'FAN10G3758' => 'fan', 'FAN11G1170' => 'fan', 'FAN11G2050' => 'fan', 'FAN11G2724' => 'fan', 'FAN12G1700' => 'fan', 'FAN12G2028' => 'fan', 'FAN15G1160' => 'fan', 'FAN15G3063' => 'fan', 'FAN16G2540' => 'fan', 'FAN16G3077' => 'fan', 'FAN16G3624' => 'fan', 'FAN17G0221' => 'fan', 'FAN20G2492' => 'fan', 'FAN20G2905' => 'fan', 'FAN21G0548' => 'fan', 'FAN21G1300' => 'fan', 'FAN22G0077' => 'fan', 'FAN22G1315' => 'fan', 'FAN24G1280' => 'fan', 'FAN24G1445' => 'fan', 'FAN24G3527' => 'fan', 'FAN25G0464' => 'fan', 'FAN25G2885' => 'fan', 'FAN25G3270' => 'fan', 'FAN27G1101' => 'fan', 'FAN27G2846' => 'fan', 'FAN27G3524' => 'fan', 'FvH4_2g11770' => 'fve', 'FvH4_2g15630' => 'fve', 'FvH4_3g05570' => 'fve', 'FvH4_3g09110' => 'fve', 'FvH4_3g19940' => 'fve', 'FvH4_4g04821' => 'fve', 'FvH4_4g31480' => 'fve', 'FvH4_7g01740' => 'fve', 'Glyma.05G130400' => 'gma', 'Glyma.05G156400' => 'gma', 'Glyma.07G197000' => 'gma', 'Glyma.08G085151' => 'gma', 'Glyma.08G114500' => 'gma', 'Glyma.08G300400' => 'gma', 'Glyma.10G215800' => 'gma', 'Glyma.12G224400' => 'gma', 'Glyma.13G179300' => 'gma', 'Glyma.13G218151' => 'gma', 'Glyma.13G238800' => 'gma', 'Glyma.13G276900' => 'gma', 'Glyma.14G078200' => 'gma', 'Glyma.15G074500' => 'gma', 'Glyma.15G094100' => 'gma', 'Glyma.17G247200' => 'gma', 'Glyma.18G120100' => 'gma', 'Glyma.20G176000' => 'gma', 'Gohir.A01G063600' => 'ghi', 'Gohir.A01G170301' => 'ghi', 'Gohir.A02G060500' => 'ghi', 'Gohir.A05G133850' => 'ghi', 'Gohir.A05G161400' => 'ghi', 'Gohir.A06G012900' => 'ghi', 'Gohir.A06G035901' => 'ghi', 'Gohir.A06G127100' => 'ghi', 'Gohir.A06G210500' => 'ghi', 'Gohir.A08G008650' => 'ghi', 'Gohir.A09G072700' => 'ghi', 'Gohir.A09G088301' => 'ghi', 'Gohir.A10G040600' => 'ghi', 'Gohir.A12G036300' => 'ghi', 'Gohir.A12G143350' => 'ghi', 'Gohir.A12G165500' => 'ghi', 'Gohir.A13G145700' => 'ghi', 'Gohir.D01G050000' => 'ghi', 'Gohir.D01G051366' => 'ghi', 'Gohir.D01G161350' => 'ghi', 'Gohir.D02G065900' => 'ghi', 'Gohir.D05G164200' => 'ghi', 'Gohir.D05G355500' => 'ghi', 'Gohir.D06G010400' => 'ghi', 'Gohir.D06G111250' => 'ghi', 'Gohir.D06G132000' => 'ghi', 'Gohir.D06G210500' => 'ghi', 'Gohir.D07G165675' => 'ghi', 'Gohir.D08G062240' => 'ghi', 'Gohir.D08G086101' => 'ghi', 'Gohir.D08G138060' => 'ghi', 'Gohir.D09G072300' => 'ghi', 'Gohir.D10G041400' => 'ghi', 'Gohir.D11G191020' => 'ghi', 'Gohir.D11G212066' => 'ghi', 'Gohir.D12G036300' => 'ghi', 'Gohir.D12G168600' => 'ghi', 'Gohir.D13G150600' => 'ghi', 'Gorai.001G057300' => 'gra', 'Gorai.002G069900' => 'gra', 'Gorai.002G200000' => 'gra', 'Gorai.003G067600' => 'gra', 'Gorai.005G074800' => 'gra', 'Gorai.006G087300' => 'gra', 'Gorai.008G037500' => 'gra', 'Gorai.008G181400' => 'gra', 'Gorai.009G169400' => 'gra', 'Gorai.009G387900' => 'gra', 'Gorai.010G013300' => 'gra', 'Gorai.010G153800' => 'gra', 'Gorai.010G255800' => 'gra', 'Gorai.011G043700' => 'gra', 'Gorai.011G198900' => 'gra', 'Gorai.013G168400' => 'gra', 'GSVIVG01005212001' => 'vvi', 'GSVIVG01006163001' => 'vvi', 'GSVIVG01009625001' => 'vvi', 'GSVIVG01014338001' => 'vvi', 'GSVIVG01020005001' => 'vvi', 'GSVIVG01021450001' => 'vvi', 'GSVIVG01023975001' => 'vvi', 'GSVIVG01034490001' => 'vvi', 'HanXRQChr04g0112071' => 'han', 'HanXRQChr05g0131151' => 'han', 'HanXRQChr09g0262371' => 'han', 'HanXRQChr09g0268401' => 'han', 'HanXRQChr10g0279241' => 'han', 'HanXRQChr10g0297961' => 'han', 'HanXRQChr11g0326231' => 'han', 'HanXRQChr11g0328471' => 'han', 'HanXRQChr16g0507941' => 'han', 'HanXRQChr17g0560211' => 'han', 'Haze_02108' => 'cav', 'Haze_02428' => 'cav', 'Haze_05593' => 'cav', 'Haze_06448' => 'cav', 'Haze_09427' => 'cav', 'Haze_12022' => 'cav', 'Haze_17612' => 'cav', 'Haze_17928' => 'cav', 'Hma1.2p1_0032F.1_g019250' => 'hma', 'Hma1.2p1_0163F.1_g072690' => 'hma', 'Hma1.2p1_0265F.1_g106710' => 'hma', 'Hma1.2p1_0286F.1_g113970' => 'hma', 'Hma1.2p1_0363F.1_g136640' => 'hma', 'Hma1.2p1_0584F.1_g183470' => 'hma', 'Hma1.2p1_0885F.1_g232570' => 'hma', 'HPP92_006022' => 'vpl', 'HPP92_007320' => 'vpl', 'HPP92_011521' => 'vpl', 'HPP92_019387' => 'vpl', 'HPP92_024038' => 'vpl', 'Hund05891' => 'sun', 'Hund06450' => 'sun', 'Hund12053' => 'sun', 'Hund16800' => 'sun', 'Hund21222' => 'sun', 'Hund22896' => 'sun', 'Hund23746' => 'sun', 'Hund27083' => 'sun', 'Lalb_Chr02g0141831' => 'lal', 'Lalb_Chr02g0141841' => 'lal', 'Lalb_Chr05g0220411' => 'lal', 'Lalb_Chr06g0162081' => 'lal', 'Lalb_Chr09g0327651' => 'lal', 'Lalb_Chr13g0295051' => 'lal', 'Lalb_Chr15g0086801' => 'lal', 'Lalb_Chr16g0383781' => 'lal', 'Lalb_Chr16g0383791' => 'lal', 'Lalb_Chr18g0055441' => 'lal', 'Lalb_Chr18g0059611' => 'lal', 'Lalb_Chr20g0109661' => 'lal', 'Lalb_Chr20g0109831' => 'lal', 'Lalb_Chr20g0121871' => 'lal', 'Lalb_Chr22g0355361' => 'lal', 'Lalb_Chr25g0286371' => 'lal', 'Lj1A1187G43' => 'lonja', 'Lj1A1205T50' => 'lonja', 'Lj1A800G33' => 'lonja', 'Lj1C1187T7' => 'lonja', 'Lj1C843T11' => 'lonja', 'Lj1g0010940' => 'lja', 'Lj2A288T69' => 'lonja', 'Lj3g0024276' => 'lja', 'Lj4A47T76' => 'lonja', 'Lj4g0005805' => 'lja', 'Lj4g0006097' => 'lja', 'Lj4g0008528' => 'lja', 'Lj4g0024907' => 'lja', 'Lj5g0012472' => 'lja', 'Lj5g0018648' => 'lja', 'Lj6C789G1' => 'lonja', 'Lj6g0004000' => 'lja', 'Lj7A292G67' => 'lonja', 'Lj7A292T64' => 'lonja', 'Lj9A400T58' => 'lonja', 'Lsat_1_v5_gn_1_126181' => 'lsa', 'Lsat_1_v5_gn_4_123041' => 'lsa', 'Lsat_1_v5_gn_4_133620' => 'lsa', 'Lsat_1_v5_gn_4_53221' => 'lsa', 'Lsat_1_v5_gn_4_71961' => 'lsa', 'Lsat_1_v5_gn_7_105241' => 'lsa', 'Lsat_1_v5_gn_7_21361' => 'lsa', 'Lsat_1_v5_gn_7_28860' => 'lsa', 'Lsat_1_v5_gn_7_31260' => 'lsa', 'Lsat_1_v5_gn_8_52801' => 'lsa', 'Manes.02G191400' => 'mes', 'Manes.03G110100' => 'mes', 'Manes.04G071100' => 'mes', 'Manes.05G100500' => 'mes', 'Manes.05G164700' => 'mes', 'Manes.15G087000' => 'mes', 'Manes.15G121500' => 'mes', 'Manes.16G028300' => 'mes', 'Manes.17G046100' => 'mes', 'Manes.17G069800' => 'mes', 'Manes.18G100500' => 'mes', 'Mapoly0002s0109' => 'mpo', 'Mapoly0024s0007' => 'mpo', 'Mapoly0089s0032' => 'mpo', 'MBI04_g42241_MAGBIO' => 'mbi', 'MBI05_g11988_MAGBIO' => 'mbi', 'MBI05_g35452_MAGBIO' => 'mbi', 'MBI07_g30179_MAGBIO' => 'mbi', 'MBI07_g35859_MAGBIO' => 'mbi', 'MBI07_g35860_MAGBIO' => 'mbi', 'MBI07_g37166_MAGBIO' => 'mbi', 'MBI08_g18172_MAGBIO' => 'mbi', 'MBI09_g08441_MAGBIO' => 'mbi', 'MBI13_g01676_MAGBIO' => 'mbi', 'MBI14_g42955_MAGBIO' => 'mbi', 'MBI16_g13161_MAGBIO' => 'mbi', 'MBI17_g27204_MAGBIO' => 'mbi', 'MBI19_g21595_MAGBIO' => 'mbi', 'MD00G1148400' => 'mdo', 'MD02G1301200' => 'mdo', 'MD03G1227800' => 'mdo', 'MD05G1041100' => 'mdo', 'MD05G1124800' => 'mdo', 'MD05G1284000' => 'mdo', 'MD05G1338800' => 'mdo', 'MD05G1338900' => 'mdo', 'MD07G1022800' => 'mdo', 'MD10G1047500' => 'mdo', 'MD10G1127500' => 'mdo', 'MD10G1262300' => 'mdo', 'MD10G1293800' => 'mdo', 'MD16G1074300' => 'mdo', 'Medtr1g021670' => 'mtr', 'Medtr1g096320' => 'mtr', 'Medtr2g013690' => 'mtr', 'Medtr2g019450' => 'mtr', 'Medtr2g085170' => 'mtr', 'Medtr4g088785' => 'mtr', 'Medtr8g055930' => 'mtr', 'Medtr8g085850' => 'mtr', 'MELO3C002605.2' => 'cme', 'MELO3C003891.2' => 'cme', 'MELO3C004012.2' => 'cme', 'MELO3C007134.2' => 'cme', 'MELO3C008118.2' => 'cme', 'MELO3C016700.2' => 'cme', 'MELO3C024127.2' => 'cme', 'MELO3C033361.2' => 'cme', 'MELO3C033362.2' => 'cme', 'Migut.C00430' => 'egut', 'Migut.C01246' => 'egut', 'Migut.E00101' => 'egut', 'Migut.H01486' => 'egut', 'Migut.H01939' => 'egut', 'Migut.K00360' => 'egut', 'Migut.M00910' => 'egut', 'Migut.M01139' => 'egut', 'Migut.N02677' => 'egut', 'MSTRG.13252' => 'ama', 'MSTRG.14701' => 'ama', 'MSTRG.1521' => 'ama', 'MSTRG.15884' => 'ama', 'MSTRG.16242' => 'ama', 'MSTRG.22285' => 'ama', 'MSTRG.22444' => 'ama', 'MSTRG.2349' => 'ama', 'MSTRG.26308' => 'ama', 'MSTRG.28296' => 'ama', 'MSTRG.9895' => 'ama', 'Nitab4.5_0000110g0060' => 'nta', 'Nitab4.5_0000420g0130' => 'nta', 'Nitab4.5_0000422g0030' => 'nta', 'Nitab4.5_0000560g0180' => 'nta', 'Nitab4.5_0000703g0100' => 'nta', 'Nitab4.5_0000786g0200' => 'nta', 'Nitab4.5_0001336g0020' => 'nta', 'Nitab4.5_0001796g0030' => 'nta', 'Nitab4.5_0003348g0060' => 'nta', 'Nitab4.5_0003698g0040' => 'nta', 'Nitab4.5_0003942g0090' => 'nta', 'Nitab4.5_0004775g0070' => 'nta', 'Nitab4.5_0004864g0030' => 'nta', 'Nitab4.5_0005615g0020' => 'nta', 'Nitab4.5_0009288g0030' => 'nta', 'Nitab4.5_0009341g0010' => 'nta', 'Nitab4.5_0009535g0010' => 'nta', 'Nn1g03995' => 'nnu', 'Nn1g04100' => 'nnu', 'Nn1g06530' => 'nnu', 'Nn3g16404' => 'nnu', 'Nn3g17212' => 'nnu', 'Nn3g20776' => 'nnu', 'Nn3g21923' => 'nnu', 'Nn5g27737' => 'nnu', 'Nn5g29461' => 'nnu', 'Nn7g38355' => 'nnu', 'Nn8g39873' => 'nnu', 'Oeu000548.2' => 'oeu', 'Oeu004672.1' => 'oeu', 'Oeu015605.2' => 'oeu', 'Oeu016092.1' => 'oeu', 'Oeu017879.3' => 'oeu', 'Oeu024910.1' => 'oeu', 'Oeu028965.1' => 'oeu', 'Oeu031269.1' => 'oeu', 'Oeu031270.1' => 'oeu', 'Oeu032535.1' => 'oeu', 'Oeu034151.1' => 'oeu', 'Oeu034152.1' => 'oeu', 'Oeu034588.2' => 'oeu', 'Oeu050846.1' => 'oeu', 'Oeu050849.2' => 'oeu', 'Oeu051063.2' => 'oeu', 'Oeu052368.1' => 'oeu', 'Oeu052370.1' => 'oeu', 'Os01g0210400' => 'osa', 'Os01g0304300' => 'osa', 'Os01g0749100' => 'osa', 'Os02g0745800' => 'osa', 'Os03g0769050' => 'osa', 'Os05g0531500' => 'osa', 'Os06g0724300' => 'osa', 'Os11g0198100' => 'osa', 'Peaxi162Scf00069g01425' => 'pax', 'Peaxi162Scf00280g00811' => 'pax', 'Peaxi162Scf00310g00615' => 'pax', 'Peaxi162Scf00362g00542' => 'pax', 'Peaxi162Scf00461g00310' => 'pax', 'Peaxi162Scf00530g00118' => 'pax', 'Peaxi162Scf00541g00057' => 'pax', 'Peaxi162Scf00661g00017' => 'pax', 'Peaxi162Scf00926g00027' => 'pax', 'Peaxi162Scf01064g00263' => 'pax', 'Peaxi162Scf01211g00135' => 'pax', 'PGR004G2336' => 'pgr', 'PGR042G0327' => 'pgr', 'PGR042G1957' => 'pgr', 'PGR042G2003' => 'pgr', 'PGR042G3929' => 'pgr', 'PGR083G1137' => 'pgr', 'PGR083G1364' => 'pgr', 'PGSC0003DMG400003381' => 'stu', 'PGSC0003DMG400003417' => 'stu', 'PGSC0003DMG400008981' => 'stu', 'PGSC0003DMG400012417' => 'stu', 'PGSC0003DMG400012823' => 'stu', 'PGSC0003DMG400016885' => 'stu', 'PGSC0003DMG400022812' => 'stu', 'PGSC0003DMG400029726' => 'stu', 'PGSC0003DMG401009243' => 'stu', 'PGSC0003DMG401031505' => 'stu', 'PGSC0003DMG402031505' => 'stu', 'Phvul.001G017600' => 'pvu', 'Phvul.002G193500' => 'pvu', 'Phvul.002G228900' => 'pvu', 'Phvul.002G236800' => 'pvu', 'Phvul.003G049500' => 'pvu', 'Phvul.005G072000' => 'pvu', 'Phvul.006G164800' => 'pvu', 'Phvul.006G185100' => 'pvu', 'Phvul.007G090000' => 'pvu', 'Potri.001G399800' => 'ptr', 'Potri.002G149900' => 'ptr', 'Potri.004G044100' => 'ptr', 'Potri.004G177600' => 'ptr', 'Potri.009G138000' => 'ptr', 'Potri.010G094000' => 'ptr', 'Potri.011G053000' => 'ptr', 'Potri.011G119300' => 'ptr', 'Potri.013G113700' => 'ptr', 'Potri.018G107800' => 'ptr', 'Potri.019G084100' => 'ptr', 'Pp3c14_23720' => 'ppa', 'Pp3c16_6340' => 'ppa', 'Pp3c23_13420' => 'ppa', 'Pp3c24_2740' => 'ppa', 'Pp3c25_860' => 'ppa', 'Pp3c8_21750' => 'ppa', 'Prupe.1G273000' => 'ppe', 'Prupe.1G273700' => 'ppe', 'Prupe.1G274100' => 'ppe', 'Prupe.2G023300' => 'ppe', 'Prupe.4G048000' => 'ppe', 'Prupe.4G080400' => 'ppe', 'Prupe.4G181200' => 'ppe', 'Prupe.8G056900' => 'ppe', 'Prupe.8G168700' => 'ppe', 'Psat1g189080' => 'psa', 'Psat1g204760' => 'psa', 'Psat4g175560' => 'psa', 'Psat4g177720' => 'psa', 'Psat5g244240' => 'psa', 'Psat6g010720' => 'psa', 'Psat6g187200' => 'psa', 'Psat7g072040' => 'psa', 'PSO017G3501' => 'pso', 'PSO063G2148' => 'pso', 'PSO063G5608' => 'pso', 'PSO210G6392' => 'pso', 'PSO541G2319' => 'pso', 'PSO541G2836' => 'pso', 'PSO541G4012' => 'pso', 'PSO541G6253' => 'pso', 'PSO675G0580' => 'pso', 'PSO675G0856' => 'pso', 'PSO675G5635' => 'pso', 'PSO675G9157' => 'pso', 'PSO832G1660' => 'pso', 'PSO832G1969' => 'pso', 'QL02p007186' => 'qlo', 'QL02p033904' => 'qlo', 'QL03p064391' => 'qlo', 'QL05p040593' => 'qlo', 'QL05p058242' => 'qlo', 'QL08p021825' => 'qlo', 'QL11p004981' => 'qlo', 'RcHm_v2.0_Chr1g0318301' => 'rch', 'RcHm_v2.0_Chr4g0418501' => 'rch', 'RcHm_v2.0_Chr4g0439971' => 'rch', 'RcHm_v2.0_Chr5g0008541' => 'rch', 'RcHm_v2.0_Chr5g0014101' => 'rch', 'RcHm_v2.0_Chr5g0014131' => 'rch', 'RcHm_v2.0_Chr5g0033621' => 'rch', 'RcHm_v2.0_Chr6g0272041' => 'rch', 'RcHm_v2.0_Chr6g0278831' => 'rch', 'Rhsim02G0130400' => 'rsi', 'Rhsim02G0171100' => 'rsi', 'Rhsim05G0053000' => 'rsi', 'Rhsim05G0053100' => 'rsi', 'Rhsim06G0096500' => 'rsi', 'Rhsim06G0096600' => 'rsi', 'Rhsim06G0199100' => 'rsi', 'Rhsim12G0062300' => 'rsi', 'Rhsim12G0062800' => 'rsi', 'Sabra02G0118600' => 'sbr', 'Sabra04G0027300' => 'sbr', 'Sabra04G0119500' => 'sbr', 'Sabra08G0112500' => 'sbr', 'Sabra11G0036800' => 'sbr', 'Sabra11G0103800' => 'sbr', 'Sabra13G0096300' => 'sbr', 'Sabra16G0262300' => 'sbr', 'Sabra18G0091700' => 'sbr', 'Sabra19G0095400' => 'sbr', 'SalBow6G3080' => 'sbo', 'SalBow7G1157' => 'sbo', 'SalBow7G2123' => 'sbo', 'SalBow7G2285' => 'sbo', 'SalBow7G3537' => 'sbo', 'SalBow8G2947' => 'sbo', 'SalBow8G4463' => 'sbo', 'SalBow8G5466' => 'sbo', 'Sc01g0001750' => 'sci', 'Sc02g0006640' => 'sci', 'Sc02g0006670' => 'sci', 'Sc04g0008220' => 'sci', 'Sc05g0006190' => 'sci', 'Sc08g0002760' => 'sci', 'Sc17g0006170' => 'sci', 'Sc22g0002050' => 'sci', 'Sc23g0001190' => 'sci', 'Sc24g0000980' => 'sci', 'Sed0006245' => 'sed', 'Sed0007543' => 'sed', 'Sed0009411' => 'sed', 'Sed0010765' => 'sed', 'Sed0012944' => 'sed', 'Sed0014682' => 'sed', 'Sed0016174' => 'sed', 'Sed0016796' => 'sed', 'Sed0020317' => 'sed', 'Sed0021467' => 'sed', 'SEGI_01316' => 'sgi', 'SEGI_03374' => 'sgi', 'SEGI_16265' => 'sgi', 'SEGI_18569' => 'sgi', 'SEGI_20351' => 'sgi', 'SEGI_26395' => 'sgi', 'SEGI_29469' => 'sgi', 'SEGI_34771' => 'sgi', 'SEGI_36769' => 'sgi', 'SEGI_37139' => 'sgi', 'SGA_v2.0_scaffold100G29687' => 'sas', 'SGA_v2.0_scaffold118G32472' => 'sas', 'SGA_v2.0_scaffold14G07051' => 'sas', 'SGA_v2.0_scaffold183G39845' => 'sas', 'SGA_v2.0_scaffold1G00174' => 'sas', 'SGA_v2.0_scaffold22G09714' => 'sas', 'SGA_v2.0_scaffold333G48992' => 'sas', 'SGA_v2.0_scaffold46G17491' => 'sas', 'SGA_v2.0_scaffold49G18294' => 'sas', 'SGA_v2.0_scaffold63G21658' => 'sas', 'SHI01741' => 'shi', 'SHI05771' => 'shi', 'SHI18077' => 'shi', 'SHI20525' => 'shi', 'SHI20527' => 'shi', 'SHI20528' => 'shi', 'SMO172G0185' => 'smo', 'SMO198G0020' => 'smo', 'SMO351G0006' => 'smo', 'SMO356G0118' => 'smo', 'SMO358G0296' => 'smo', 'SMO367G0079' => 'smo', 'SMO367G1277' => 'smo', 'Solyc01g014220.3' => 'sly', 'Solyc01g111770.2' => 'sly', 'Solyc02g078180.3' => 'sly', 'Solyc03g006430.3' => 'sly', 'Solyc03g006456.1' => 'sly', 'Solyc03g079860.2' => 'sly', 'Solyc04g079770.3' => 'sly', 'Solyc05g007430.4' => 'sly', 'Solyc07g063150.3' => 'sly', 'Solyc08g016620.3' => 'sly', 'Solyc09g057590.3' => 'sly', 'Solyc09g057600.1' => 'sly', 'Solyc10g009050.3' => 'sly', 'Solyc11g017420.2' => 'sly', 'Sopen01g053810' => 'spe', 'Sopen02g023040' => 'spe', 'Sopen03g002440' => 'spe', 'Sopen04g033350' => 'spe', 'Sopen05g003310' => 'spe', 'Sopen07g004050' => 'spe', 'Sopen07g031340' => 'spe', 'Sopen08g006990' => 'spe', 'Sopen10g004830' => 'spe', 'Sopen11g009370' => 'spe', 'Sp1g24450' => 'spa', 'Sp1g29670' => 'spa', 'Sp1g39600' => 'spa', 'Sp2g11080' => 'spa', 'Sp2g13970' => 'spa', 'Sp4g16130' => 'spa', 'Sp6g13080' => 'spa', 'Sp7g37270' => 'spa', 'TAR371G0065' => 'tar', 'TAR376G0340' => 'tar', 'TAR376G0435' => 'tar', 'TAR381G0002' => 'tar', 'TAR381G1236' => 'tar', 'TAR624G0055' => 'tar', 'TAR624G0324' => 'tar', 'TAR624G0696' => 'tar', 'TAR624G0906' => 'tar', 'TAR625G0107' => 'tar', 'TAR626G0015' => 'tar', 'TAR626G1356' => 'tar', 'TAR627G0888' => 'tar', 'TAR628G0399' => 'tar', 'TAR628G1327' => 'tar', 'TAR629G2831' => 'tar', 'TAR629G2874' => 'tar', 'TAR633G1432' => 'tar', 'TAR633G2771' => 'tar', 'THA.LOC104803394' => 'tha', 'THA.LOC104805153' => 'tha', 'THA.LOC104806784' => 'tha', 'THA.LOC104810473' => 'tha', 'THA.LOC104813100' => 'tha', 'THA.LOC104814215' => 'tha', 'THA.LOC104815554' => 'tha', 'THA.LOC104820544' => 'tha', 'THA.LOC104824754' => 'tha', 'THA.LOC104827717' => 'tha', 'Thecc.02G031400' => 'tca', 'Thecc.02G055900' => 'tca', 'Thecc.02G350800' => 'tca', 'Thecc.06G150900' => 'tca', 'Thecc.06G186600' => 'tca', 'Thecc.07G089600' => 'tca', 'Thecc.08G020400' => 'tca', 'Thecc.08G182100' => 'tca', 'Thhalv10000873m.g' => 'esa', 'Thhalv10004185m.g' => 'esa', 'Thhalv10006981m.g' => 'esa', 'Thhalv10007204m.g' => 'esa', 'Thhalv10011374m.g' => 'esa', 'Thhalv10013482m.g' => 'esa', 'Thhalv10017801m.g' => 'esa', 'Thhalv10024983m.g' => 'esa', 'TPR.G12072' => 'tpr', 'TPR.G15769' => 'tpr', 'TPR.G16504' => 'tpr', 'TPR.G16506' => 'tpr', 'TPR.G24345' => 'tpr', 'TPR.G26666' => 'tpr', 'TPR.G27320' => 'tpr', 'TPR.G31819' => 'tpr', 'TPR.G38879' => 'tpr', 'TPR.G39015' => 'tpr', 'TPR.G8819' => 'tpr', 'TWI09G0924' => 'twi', 'TWI12G0811' => 'twi', 'TWI12G1294' => 'twi', 'TWI31G0150' => 'twi', 'TWI36G1262' => 'twi', 'TWI38G1287' => 'twi', 'TWI38G1633' => 'twi', 'TWI38G1982' => 'twi', 'TWI39G0116' => 'twi', 'TWI60G1011' => 'twi', 'TWI63G0171' => 'twi', 'TWI73G0839' => 'twi', 'TWI79G1511' => 'twi', 'unitig_0.g915' => 'ugi', 'unitig_0.g916' => 'ugi', 'unitig_21.g20219' => 'ugi', 'unitig_21.g20416' => 'ugi', 'unitig_578.g16132' => 'ugi', 'unitig_578.g16718' => 'ugi', 'unitig_62.g23481' => 'ugi', 'unitig_744.g24535' => 'ugi', 'unitig_749.g13525' => 'ugi', 'vmacro01248' => 'vma', 'vmacro02290' => 'vma', 'vmacro10946' => 'vma', 'vmacro11865' => 'vma', 'vmacro12493' => 'vma', 'vmacro17322' => 'vma', 'vmacro21599' => 'vma', 'vmacro23041' => 'vma', 'VMungo0251G0004' => 'vmu', 'VMungo0251G2639' => 'vmu', 'VMungo0251G2967' => 'vmu', 'VMungo0540G0864' => 'vmu', 'VMungo0540G1569' => 'vmu', 'VMungo0647G0317' => 'vmu', 'VMungo0720G1373' => 'vmu', 'VMungo0720G1508' => 'vmu', 'VMungo1080G0485' => 'vmu', 'VMungo1215G3177' => 'vmu', 'Zm00001eb112600' => 'zma', 'Zm00001eb120220' => 'zma', 'Zm00001eb153240' => 'zma', 'Zm00001eb168880' => 'zma', 'Zm00001eb213920' => 'zma', 'Zm00001eb228280' => 'zma', 'Zm00001eb254580' => 'zma', 'Zm00001eb272180' => 'zma', 'Zm00001eb293190' => 'zma', 'Zm00001eb322930' => 'zma', 'Zm00001eb353360' => 'zma', 'Zm00001eb353390' => 'zma', 'Zm00001eb353430' => 'zma', 'Zm00001eb353440' => 'zma', 'Zm00001eb353780' => 'zma' ) $gf_id = 'HOM05D000499' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000499' ) $data_identifier = 'HOM05D000499' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 29, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 12, 'amhyb' => (int) 8, 'aly' => (int) 12, 'aox' => (int) 9, 'arhy' => (int) 26, 'ath' => (int) 8, 'atr' => (int) 7, 'acertr' => (int) 10, 'cqu' => (int) 15, 'bca' => (int) 29, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 11, 'cansat' => (int) 8, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 9, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 8, 'cpa' => (int) 10, 'csa' => (int) 7, 'camsi' => (int) 20, 'dca' => (int) 8, 'din' => (int) 12, 'dzi' => (int) 14, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 6, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 38, 'gra' => (int) 16, 'vvi' => (int) 8, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 5, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 11, 'lja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 11, 'mpo' => (int) 3, 'mbi' => (int) 14, 'mdo' => (int) 14, 'mtr' => (int) 8, 'cme' => (int) 9, 'egut' => (int) 9, 'ama' => (int) 11, 'nta' => (int) 17, 'nnu' => (int) 11, 'oeu' => (int) 18, 'osa' => (int) 8, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 6, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 9, 'rsi' => (int) 9, 'sbr' => (int) 10, 'sbo' => (int) 8, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 10, 'sas' => (int) 10, 'shi' => (int) 6, 'smo' => (int) 7, 'sly' => (int) 14, 'spe' => (int) 10, 'spa' => (int) 8, 'tar' => (int) 19, 'tha' => (int) 10, 'tca' => (int) 8, 'esa' => (int) 8, 'tpr' => (int) 11, 'twi' => (int) 13, 'ugi' => (int) 9, 'vma' => (int) 8, 'vmu' => (int) 10, 'zma' => (int) 15 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb353780' $species_info = array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ) $local_species = 'arhy' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000499', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1066', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p29780' => 'bna', 'A02p33180' => 'bna', 'A03p16470' => 'bna', 'A03p66010' => 'bna', 'A04p25970' => 'bna', 'A06p01270' => 'bna', 'A06p46080' => 'bna', 'A07p11400' => 'bna', 'A08p01840' => 'bna', 'A08p08230' => 'bna', 'A08p25740' => 'bna', 'A09p32070' => 'bna', 'A09p37830' => 'bna', 'A09p42840' => 'bna', 'A09p42850' => 'bna', 'Aa31LG10G2060' => 'aar', 'Aa31LG2G7410' => 'aar', 'Aa31LG6G10200' => 'aar', 'Aa31LG6G16680' => 'aar', 'Aa31LG6G8470' => 'aar', 'Aa31LG9G12730' => 'aar', 'Aa31LG9G13680' => 'aar', 'Aa31LG9G14920' => 'aar', 'Aa31LG9G6650' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4977' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5467' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3254' => 'aag', 'Actinidia02578' => 'ach', 'Actinidia07693' => 'ach', 'Actinidia08413' => 'ach', 'Actinidia08414' => 'ach', 'Actinidia15289' => 'ach', 'Actinidia19871' => 'ach', 'Actinidia21475' => 'ach', 'Actinidia22576' => 'ach', 'Actinidia28327' => 'ach', 'Actinidia32491' => 'ach', 'Actinidia39463' => 'ach', 'Actinidia39571' => 'ach', 'Ah.01g013750' => 'amhyb', 'Ah.01g023210' => 'amhyb', 'Ah.04g164850' => 'amhyb', 'Ah.05g178060' => 'amhyb', 'Ah.07g204270' => 'amhyb', 'Ah.07g208480' => 'amhyb', 'Ah.09g237410' => 'amhyb', 'Ah.14g089460' => 'amhyb', 'AL1G41790' => 'aly', 'AL1G49050' => 'aly', 'AL1G53810' => 'aly', 'AL1G61400' => 'aly', 'AL4G18580' => 'aly', 'AL5G12510' => 'aly', 'AL5G12540' => 'aly', 'AL6G43230' => 'aly', 'AL7G10370' => 'aly', 'AL7G19250' => 'aly', 'AL8G12240' => 'aly', 'AL8G18540' => 'aly', 'Aqoxy1G02409' => 'aox', 'Aqoxy2G03993' => 'aox', 'Aqoxy3G03357' => 'aox', 'Aqoxy4G00785' => 'aox', 'Aqoxy5G02598' => 'aox', 'Aqoxy6G00132' => 'aox', 'Aqoxy7G01776' => 'aox', 'Aqoxy7G02316' => 'aox', 'Aqoxy7G03973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.12AFKW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B8730' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27IQR1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3F75VG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3RE0GA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41TCQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.527VTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FIR39' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5W8UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DA38EV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ63HS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H1I32C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HC27T5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4M8AP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7N3CZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9UVDZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LS1NQA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT1D4B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SKC4TM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCFV76' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF9Q1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQWD9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1ZM88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WE07RT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YCK7VH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJE6Q6' => 'arhy', 'AT1G28240' => 'ath', 'AT1G34550' => 'ath', 'AT1G53040' => 'ath', 'AT2G02910' => 'ath', 'AT4G09630' => 'ath', 'AT4G38500' => 'ath', 'AT5G42660' => 'ath', 'AT5G46220' => 'ath', 'ATR0152G026' => 'atr', 'ATR0564G343' => 'atr', 'ATR0706G151' => 'atr', 'ATR0733G207' => 'atr', 'ATR0751G234' => 'atr', 'ATR0807G048' => 'atr', 'ATR1091G084' => 'atr', 'Atru.chr10.1229' => 'acertr', 'Atru.chr10.1230' => 'acertr', 'Atru.chr10.1874' => 'acertr', 'Atru.chr11.1808' => 'acertr', 'Atru.chr13.1795' => 'acertr', 'Atru.chr13.570' => 'acertr', 'Atru.chr2.2608' => 'acertr', 'Atru.chr2.2609' => 'acertr', 'Atru.chr5.3428' => 'acertr', 'Atru.chr8.1171' => 'acertr', 'AUR62004651' => 'cqu', 'AUR62008675' => 'cqu', 'AUR62010014' => 'cqu', 'AUR62013004' => 'cqu', 'AUR62014825' => 'cqu', 'AUR62015015' => 'cqu', 'AUR62015151' => 'cqu', 'AUR62017020' => 'cqu', 'AUR62019422' => 'cqu', 'AUR62023570' => 'cqu', 'AUR62025571' => 'cqu', 'AUR62029098' => 'cqu', 'AUR62033863' => 'cqu', 'AUR62034296' => 'cqu', 'AUR62040075' => 'cqu', 'BcaB02g07334' => 'bca', 'BcaB02g10575' => 'bca', 'BcaB03g12119' => 'bca', 'BcaB03g12120' => 'bca', 'BcaB03g13945' => 'bca', 'BcaB04g17123' => 'bca', 'BcaB04g17867' => 'bca', 'BcaB04g19839' => 'bca', 'BcaB07g30317' => 'bca', 'BcaB07g32432' => 'bca', 'BcaB07g33362' => 'bca', 'BcaB08g36611' => 'bca', 'BcaC01g00028' => 'bca', 'BcaC01g01356' => 'bca', 'BcaC01g02034' => 'bca', 'BcaC01g06051' => 'bca', 'BcaC03g16839' => 'bca', 'BcaC03g17176' => 'bca', 'BcaC05g26829' => 'bca', 'BcaC06g31490' => 'bca', 'BcaC06g35344' => 'bca', 'BcaC06g36570' => 'bca', 'BcaC07g37537' => 'bca', 'BcaC08g43491' => 'bca', 'BcaC08g43773' => 'bca', 'BcaNung00234' => 'bca', 'BcaNung01982' => 'bca', 'BcaNung03707' => 'bca', 'BcaNung06454' => 'bca', 'BolC2t10762H' => 'bol', 'BolC2t11191H' => 'bol', 'BolC3t14322H' => 'bol', 'BolC3t19747H' => 'bol', 'BolC3t21425H' => 'bol', 'BolC4t27800H' => 'bol', 'BolC5t31423H' => 'bol', 'BolC6t35951H' => 'bol', 'BolC6t36282H' => 'bol', 'BolC7t40678H' => 'bol', 'BolC7t40679H' => 'bol', 'BolC7t42222H' => 'bol', 'BolC7t43492H' => 'bol', 'BolC7t46785H' => 'bol', 'BolC8t47853H' => 'bol', 'BolC9t56805H' => 'bol', 'BraA02t08000Z' => 'bra', 'BraA02t08341Z' => 'bra', 'BraA03t10936Z' => 'bra', 'BraA03t15657Z' => 'bra', 'BraA04t18100Z' => 'bra', 'BraA05t20523Z' => 'bra', 'BraA06t23353Z' => 'bra', 'BraA06t27473Z' => 'bra', 'BraA06t27769Z' => 'bra', 'BraA07t28928Z' => 'bra', 'BraA08t32236Z' => 'bra', 'BraA08t32841Z' => 'bra', 'BraA08t34524Z' => 'bra', 'BraA09t38742Z' => 'bra', 'BraA09t39295Z' => 'bra', 'C02p47180' => 'bna', 'C02p50990' => 'bna', 'C03p19360' => 'bna', 'C03p74950' => 'bna', 'C03p91000' => 'bna', 'C04p63260' => 'bna', 'C05p27050' => 'bna', 'C06p08750' => 'bna', 'C06p11490' => 'bna', 'C07p02820' => 'bna', 'C07p17180' => 'bna', 'C07p29440' => 'bna', 'C07p63730' => 'bna', 'C09p39260' => 'bna', 'CAN.G1164.34' => 'can', 'CAN.G1164.39' => 'can', 'CAN.G1530.3' => 'can', 'CAN.G162.61' => 'can', 'CAN.G176.6' => 'can', 'CAN.G289.49' => 'can', 'CAN.G370.21' => 'can', 'CAN.G370.22' => 'can', 'CAN.G371.117' => 'can', 'CAN.G58.37' => 'can', 'CAN.G588.98' => 'can', 'CANSAT21G2266' => 'cansat', 'CANSAT25G2799' => 'cansat', 'CANSAT35G0862' => 'cansat', 'CANSAT35G1704' => 'cansat', 'CANSAT35G1760' => 'cansat', 'CANSAT56G3971' => 'cansat', 'CANSAT56G4116' => 'cansat', 'CANSAT80G1259' => 'cansat', 'CARHR027730' => 'chi', 'CARHR033880' => 'chi', 'CARHR043270' => 'chi', 'CARHR145330' => 'chi', 'CARHR145340' => 'chi', 'CARHR175570' => 'chi', 'CARHR181570' => 'chi', 'CARHR258470' => 'chi', 'CARHR260490' => 'chi', 'CARHR294220' => 'chi', 'Carub.0001s2668' => 'cru', 'Carub.0001s3257' => 'cru', 'Carub.0001s4220' => 'cru', 'Carub.0005s0179' => 'cru', 'Carub.0006s2807' => 'cru', 'Carub.0007s0039' => 'cru', 'Carub.0008s0169' => 'cru', 'Carub.0008s0636' => 'cru', 'Ca_00338_v3' => 'car', 'Ca_00542_v3' => 'car', 'Ca_01844_v3' => 'car', 'Ca_10611_v3' => 'car', 'Ca_13326_v3' => 'car', 'Ca_17944_v3' => 'car', 'Ca_18546_v3' => 'car', 'Ca_24219_v3' => 'car', 'Ca_29972_v3' => 'car', 'CBR_g3681' => 'cbr', 'CBR_g40021' => 'cbr', 'Cc01_g08140' => 'ccan', 'Cc02_g13410' => 'ccan', 'Cc02_g37480' => 'ccan', 'Cc05_g12030' => 'ccan', 'Cc09_g03370' => 'ccan', 'Cc09_g10300' => 'ccan', 'Cc10_g03530' => 'ccan', 'Cc10_g11380' => 'ccan', 'CDE01G0176' => 'cde', 'CDE02G0675' => 'cde', 'CDE02G0942' => 'cde', 'CDE02G1153' => 'cde', 'CDE02G4177' => 'cde', 'CDE04G2117' => 'cde', 'CDE04G2736' => 'cde', 'CDE08G1161' => 'cde', 'CDE09G1238' => 'cde', 'Cfa000467' => 'cfa', 'Cfa000947' => 'cfa', 'Cfa004969' => 'cfa', 'Cfa005284' => 'cfa', 'Cfa008993' => 'cfa', 'Cfa018187' => 'cfa', 'Cfa018454' => 'cfa', 'Cfa020585' => 'cfa', 'Ciclev10000424m.g' => 'ccl', 'Ciclev10003605m.g' => 'ccl', 'Ciclev10007828m.g' => 'ccl', 'Ciclev10014620m.g' => 'ccl', 'Ciclev10015169m.g' => 'ccl', 'Ciclev10018291m.g' => 'ccl', 'Ciclev10028256m.g' => 'ccl', 'Ciclev10033822m.g' => 'ccl', 'CiPaw.05G060300' => 'cil', 'CiPaw.05G085000' => 'cil', 'CiPaw.06G083700' => 'cil', 'CiPaw.06G120300' => 'cil', 'CiPaw.09G060500' => 'cil', 'CiPaw.09G123800' => 'cil', 'CiPaw.11G169700' => 'cil', 'CiPaw.12G118300' => 'cil', 'CiPaw.15G071000' => 'cil', 'CiPaw.15G081900' => 'cil', 'ClCG01G024610' => 'cla', 'ClCG03G006070' => 'cla', 'ClCG05G019250' => 'cla', 'ClCG09G009500' => 'cla', 'ClCG11G008200' => 'cla', 'ClCG11G018080' => 'cla', 'COL.COLO4_17373' => 'col', 'COL.COLO4_22994' => 'col', 'COL.COLO4_26389' => 'col', 'COL.COLO4_27170' => 'col', 'COL.COLO4_31074' => 'col', 'COL.COLO4_31465' => 'col', 'COL.COLO4_36438' => 'col', 'COL.COLO4_36439' => 'col', 'Cpa.g.c38781' => 'cpa', 'Cpa.g.sc128.12' => 'cpa', 'Cpa.g.sc166.7' => 'cpa', 'Cpa.g.sc166.8' => 'cpa', 'Cpa.g.sc20.111' => 'cpa', 'Cpa.g.sc27.31' => 'cpa', 'Cpa.g.sc64.36' => 'cpa', 'Cpa.g.sc64.37' => 'cpa', 'Cpa.g.sc66.49' => 'cpa', 'Cpa.g.sc80.64' => 'cpa', 'CsaV3_1G012320' => 'csa', 'CsaV3_2G008480' => 'csa', 'CsaV3_2G033450' => 'csa', 'CsaV3_3G044830' => 'csa', 'CsaV3_4G033710' => 'csa', 'CsaV3_6G051730' => 'csa', 'CsaV3_7G025350' => 'csa', 'CSS0001067' => 'camsi', 'CSS0005996' => 'camsi', 'CSS0006590' => 'camsi', 'CSS0009673' => 'camsi', 'CSS0010201' => 'camsi', 'CSS0010549' => 'camsi', 'CSS0011364' => 'camsi', 'CSS0014473' => 'camsi', 'CSS0014961' => 'camsi', 'CSS0020191' => 'camsi', 'CSS0021165' => 'camsi', 'CSS0022306' => 'camsi', 'CSS0030591' => 'camsi', 'CSS0030696' => 'camsi', 'CSS0032653' => 'camsi', 'CSS0037487' => 'camsi', 'CSS0041102' => 'camsi', 'CSS0041261' => 'camsi', 'CSS0046246' => 'camsi', 'CSS0049256' => 'camsi', 'DCAR_004075' => 'dca', 'DCAR_011538' => 'dca', 'DCAR_019553' => 'dca', 'DCAR_020952' => 'dca', 'DCAR_021739' => 'dca', 'DCAR_027407' => 'dca', 'DCAR_027913' => 'dca', 'DCAR_028066' => 'dca', 'Dinv05899' => 'din', 'Dinv07563' => 'din', 'Dinv08010' => 'din', 'Dinv14125' => 'din', 'Dinv20172' => 'din', 'Dinv30743' => 'din', 'Dinv31229' => 'din', 'Dinv34162' => 'din', 'Dinv36028' => 'din', 'Dinv39368' => 'din', 'Dinv40565' => 'din', 'Dinv41706' => 'din', 'Duzib052G0089' => 'dzi', 'Duzib116G0641' => 'dzi', 'Duzib132G0069' => 'dzi', 'Duzib132G1219' => 'dzi', 'Duzib147G0278' => 'dzi', 'Duzib160G0480' => 'dzi', 'Duzib170G0661' => 'dzi', 'Duzib177G0591' => 'dzi', 'Duzib187G1353' => 'dzi', 'Duzib192G0858' => 'dzi', 'Duzib192G0883' => 'dzi', 'Duzib213G0506' => 'dzi', 'Duzib235G0289' => 'dzi', 'Duzib251G0422' => 'dzi', 'ECA232G3898' => 'eca', 'ECA233G5950' => 'eca', 'ECA234G1699' => 'eca', 'ECA234G2421' => 'eca', 'ECA236G0426' => 'eca', 'ECA236G4331' => 'eca', 'ECA248G2573' => 'eca', 'EL10Ac1g00077' => 'bvu', 'EL10Ac1g01746' => 'bvu', 'EL10Ac2g03464' => 'bvu', 'EL10Ac4g08176' => 'bvu', 'EL10Ac7g17521' => 'bvu', 'EL10Ac8g20386' => 'bvu', 'EL10Ac9g21343' => 'bvu', 'EL10Ac9g22688' => 'bvu', 'Eucgr.B03434' => 'egr', 'Eucgr.D00618' => 'egr', 'Eucgr.E02395' => 'egr', 'Eucgr.F01129' => 'egr', 'Eucgr.F02622' => 'egr', 'Eucgr.F04207' => 'egr', 'FAN01G0570' => 'fan', 'FAN03G3351' => 'fan', 'FAN06G3702' => 'fan', 'FAN07G2149' => 'fan', 'FAN10G3758' => 'fan', 'FAN11G1170' => 'fan', 'FAN11G2050' => 'fan', 'FAN11G2724' => 'fan', 'FAN12G1700' => 'fan', 'FAN12G2028' => 'fan', 'FAN15G1160' => 'fan', 'FAN15G3063' => 'fan', 'FAN16G2540' => 'fan', 'FAN16G3077' => 'fan', 'FAN16G3624' => 'fan', 'FAN17G0221' => 'fan', 'FAN20G2492' => 'fan', 'FAN20G2905' => 'fan', 'FAN21G0548' => 'fan', 'FAN21G1300' => 'fan', 'FAN22G0077' => 'fan', 'FAN22G1315' => 'fan', 'FAN24G1280' => 'fan', 'FAN24G1445' => 'fan', 'FAN24G3527' => 'fan', 'FAN25G0464' => 'fan', 'FAN25G2885' => 'fan', 'FAN25G3270' => 'fan', 'FAN27G1101' => 'fan', 'FAN27G2846' => 'fan', 'FAN27G3524' => 'fan', 'FvH4_2g11770' => 'fve', 'FvH4_2g15630' => 'fve', 'FvH4_3g05570' => 'fve', 'FvH4_3g09110' => 'fve', 'FvH4_3g19940' => 'fve', 'FvH4_4g04821' => 'fve', 'FvH4_4g31480' => 'fve', 'FvH4_7g01740' => 'fve', 'Glyma.05G130400' => 'gma', 'Glyma.05G156400' => 'gma', 'Glyma.07G197000' => 'gma', 'Glyma.08G085151' => 'gma', 'Glyma.08G114500' => 'gma', 'Glyma.08G300400' => 'gma', 'Glyma.10G215800' => 'gma', 'Glyma.12G224400' => 'gma', 'Glyma.13G179300' => 'gma', 'Glyma.13G218151' => 'gma', 'Glyma.13G238800' => 'gma', 'Glyma.13G276900' => 'gma', 'Glyma.14G078200' => 'gma', 'Glyma.15G074500' => 'gma', 'Glyma.15G094100' => 'gma', 'Glyma.17G247200' => 'gma', 'Glyma.18G120100' => 'gma', 'Glyma.20G176000' => 'gma', 'Gohir.A01G063600' => 'ghi', 'Gohir.A01G170301' => 'ghi', 'Gohir.A02G060500' => 'ghi', 'Gohir.A05G133850' => 'ghi', 'Gohir.A05G161400' => 'ghi', 'Gohir.A06G012900' => 'ghi', 'Gohir.A06G035901' => 'ghi', 'Gohir.A06G127100' => 'ghi', 'Gohir.A06G210500' => 'ghi', 'Gohir.A08G008650' => 'ghi', 'Gohir.A09G072700' => 'ghi', 'Gohir.A09G088301' => 'ghi', 'Gohir.A10G040600' => 'ghi', 'Gohir.A12G036300' => 'ghi', 'Gohir.A12G143350' => 'ghi', 'Gohir.A12G165500' => 'ghi', 'Gohir.A13G145700' => 'ghi', 'Gohir.D01G050000' => 'ghi', 'Gohir.D01G051366' => 'ghi', 'Gohir.D01G161350' => 'ghi', 'Gohir.D02G065900' => 'ghi', 'Gohir.D05G164200' => 'ghi', 'Gohir.D05G355500' => 'ghi', 'Gohir.D06G010400' => 'ghi', 'Gohir.D06G111250' => 'ghi', 'Gohir.D06G132000' => 'ghi', 'Gohir.D06G210500' => 'ghi', 'Gohir.D07G165675' => 'ghi', 'Gohir.D08G062240' => 'ghi', 'Gohir.D08G086101' => 'ghi', 'Gohir.D08G138060' => 'ghi', 'Gohir.D09G072300' => 'ghi', 'Gohir.D10G041400' => 'ghi', 'Gohir.D11G191020' => 'ghi', 'Gohir.D11G212066' => 'ghi', 'Gohir.D12G036300' => 'ghi', 'Gohir.D12G168600' => 'ghi', 'Gohir.D13G150600' => 'ghi', 'Gorai.001G057300' => 'gra', 'Gorai.002G069900' => 'gra', 'Gorai.002G200000' => 'gra', 'Gorai.003G067600' => 'gra', 'Gorai.005G074800' => 'gra', 'Gorai.006G087300' => 'gra', 'Gorai.008G037500' => 'gra', 'Gorai.008G181400' => 'gra', 'Gorai.009G169400' => 'gra', 'Gorai.009G387900' => 'gra', 'Gorai.010G013300' => 'gra', 'Gorai.010G153800' => 'gra', 'Gorai.010G255800' => 'gra', 'Gorai.011G043700' => 'gra', 'Gorai.011G198900' => 'gra', 'Gorai.013G168400' => 'gra', 'GSVIVG01005212001' => 'vvi', 'GSVIVG01006163001' => 'vvi', 'GSVIVG01009625001' => 'vvi', 'GSVIVG01014338001' => 'vvi', 'GSVIVG01020005001' => 'vvi', 'GSVIVG01021450001' => 'vvi', 'GSVIVG01023975001' => 'vvi', 'GSVIVG01034490001' => 'vvi', 'HanXRQChr04g0112071' => 'han', 'HanXRQChr05g0131151' => 'han', 'HanXRQChr09g0262371' => 'han', 'HanXRQChr09g0268401' => 'han', 'HanXRQChr10g0279241' => 'han', 'HanXRQChr10g0297961' => 'han', 'HanXRQChr11g0326231' => 'han', 'HanXRQChr11g0328471' => 'han', 'HanXRQChr16g0507941' => 'han', 'HanXRQChr17g0560211' => 'han', 'Haze_02108' => 'cav', 'Haze_02428' => 'cav', 'Haze_05593' => 'cav', 'Haze_06448' => 'cav', 'Haze_09427' => 'cav', 'Haze_12022' => 'cav', 'Haze_17612' => 'cav', 'Haze_17928' => 'cav', 'Hma1.2p1_0032F.1_g019250' => 'hma', 'Hma1.2p1_0163F.1_g072690' => 'hma', 'Hma1.2p1_0265F.1_g106710' => 'hma', 'Hma1.2p1_0286F.1_g113970' => 'hma', 'Hma1.2p1_0363F.1_g136640' => 'hma', 'Hma1.2p1_0584F.1_g183470' => 'hma', 'Hma1.2p1_0885F.1_g232570' => 'hma', 'HPP92_006022' => 'vpl', 'HPP92_007320' => 'vpl', 'HPP92_011521' => 'vpl', 'HPP92_019387' => 'vpl', 'HPP92_024038' => 'vpl', 'Hund05891' => 'sun', 'Hund06450' => 'sun', 'Hund12053' => 'sun', 'Hund16800' => 'sun', 'Hund21222' => 'sun', 'Hund22896' => 'sun', 'Hund23746' => 'sun', 'Hund27083' => 'sun', 'Lalb_Chr02g0141831' => 'lal', 'Lalb_Chr02g0141841' => 'lal', 'Lalb_Chr05g0220411' => 'lal', 'Lalb_Chr06g0162081' => 'lal', 'Lalb_Chr09g0327651' => 'lal', 'Lalb_Chr13g0295051' => 'lal', 'Lalb_Chr15g0086801' => 'lal', 'Lalb_Chr16g0383781' => 'lal', 'Lalb_Chr16g0383791' => 'lal', 'Lalb_Chr18g0055441' => 'lal', 'Lalb_Chr18g0059611' => 'lal', 'Lalb_Chr20g0109661' => 'lal', 'Lalb_Chr20g0109831' => 'lal', 'Lalb_Chr20g0121871' => 'lal', 'Lalb_Chr22g0355361' => 'lal', 'Lalb_Chr25g0286371' => 'lal', 'Lj1A1187G43' => 'lonja', 'Lj1A1205T50' => 'lonja', 'Lj1A800G33' => 'lonja', 'Lj1C1187T7' => 'lonja', 'Lj1C843T11' => 'lonja', 'Lj1g0010940' => 'lja', 'Lj2A288T69' => 'lonja', 'Lj3g0024276' => 'lja', 'Lj4A47T76' => 'lonja', 'Lj4g0005805' => 'lja', 'Lj4g0006097' => 'lja', 'Lj4g0008528' => 'lja', 'Lj4g0024907' => 'lja', 'Lj5g0012472' => 'lja', 'Lj5g0018648' => 'lja', 'Lj6C789G1' => 'lonja', 'Lj6g0004000' => 'lja', 'Lj7A292G67' => 'lonja', 'Lj7A292T64' => 'lonja', 'Lj9A400T58' => 'lonja', 'Lsat_1_v5_gn_1_126181' => 'lsa', 'Lsat_1_v5_gn_4_123041' => 'lsa', 'Lsat_1_v5_gn_4_133620' => 'lsa', 'Lsat_1_v5_gn_4_53221' => 'lsa', 'Lsat_1_v5_gn_4_71961' => 'lsa', 'Lsat_1_v5_gn_7_105241' => 'lsa', 'Lsat_1_v5_gn_7_21361' => 'lsa', 'Lsat_1_v5_gn_7_28860' => 'lsa', 'Lsat_1_v5_gn_7_31260' => 'lsa', 'Lsat_1_v5_gn_8_52801' => 'lsa', 'Manes.02G191400' => 'mes', 'Manes.03G110100' => 'mes', 'Manes.04G071100' => 'mes', 'Manes.05G100500' => 'mes', 'Manes.05G164700' => 'mes', 'Manes.15G087000' => 'mes', 'Manes.15G121500' => 'mes', 'Manes.16G028300' => 'mes', 'Manes.17G046100' => 'mes', 'Manes.17G069800' => 'mes', 'Manes.18G100500' => 'mes', 'Mapoly0002s0109' => 'mpo', 'Mapoly0024s0007' => 'mpo', 'Mapoly0089s0032' => 'mpo', 'MBI04_g42241_MAGBIO' => 'mbi', 'MBI05_g11988_MAGBIO' => 'mbi', 'MBI05_g35452_MAGBIO' => 'mbi', 'MBI07_g30179_MAGBIO' => 'mbi', 'MBI07_g35859_MAGBIO' => 'mbi', 'MBI07_g35860_MAGBIO' => 'mbi', 'MBI07_g37166_MAGBIO' => 'mbi', 'MBI08_g18172_MAGBIO' => 'mbi', 'MBI09_g08441_MAGBIO' => 'mbi', 'MBI13_g01676_MAGBIO' => 'mbi', 'MBI14_g42955_MAGBIO' => 'mbi', 'MBI16_g13161_MAGBIO' => 'mbi', 'MBI17_g27204_MAGBIO' => 'mbi', 'MBI19_g21595_MAGBIO' => 'mbi', 'MD00G1148400' => 'mdo', 'MD02G1301200' => 'mdo', 'MD03G1227800' => 'mdo', 'MD05G1041100' => 'mdo', 'MD05G1124800' => 'mdo', 'MD05G1284000' => 'mdo', 'MD05G1338800' => 'mdo', 'MD05G1338900' => 'mdo', 'MD07G1022800' => 'mdo', 'MD10G1047500' => 'mdo', 'MD10G1127500' => 'mdo', 'MD10G1262300' => 'mdo', 'MD10G1293800' => 'mdo', 'MD16G1074300' => 'mdo', 'Medtr1g021670' => 'mtr', 'Medtr1g096320' => 'mtr', 'Medtr2g013690' => 'mtr', 'Medtr2g019450' => 'mtr', 'Medtr2g085170' => 'mtr', 'Medtr4g088785' => 'mtr', 'Medtr8g055930' => 'mtr', 'Medtr8g085850' => 'mtr', 'MELO3C002605.2' => 'cme', 'MELO3C003891.2' => 'cme', 'MELO3C004012.2' => 'cme', 'MELO3C007134.2' => 'cme', 'MELO3C008118.2' => 'cme', 'MELO3C016700.2' => 'cme', 'MELO3C024127.2' => 'cme', 'MELO3C033361.2' => 'cme', 'MELO3C033362.2' => 'cme', 'Migut.C00430' => 'egut', 'Migut.C01246' => 'egut', 'Migut.E00101' => 'egut', 'Migut.H01486' => 'egut', 'Migut.H01939' => 'egut', 'Migut.K00360' => 'egut', 'Migut.M00910' => 'egut', 'Migut.M01139' => 'egut', 'Migut.N02677' => 'egut', 'MSTRG.13252' => 'ama', 'MSTRG.14701' => 'ama', 'MSTRG.1521' => 'ama', 'MSTRG.15884' => 'ama', 'MSTRG.16242' => 'ama', 'MSTRG.22285' => 'ama', 'MSTRG.22444' => 'ama', 'MSTRG.2349' => 'ama', 'MSTRG.26308' => 'ama', 'MSTRG.28296' => 'ama', 'MSTRG.9895' => 'ama', 'Nitab4.5_0000110g0060' => 'nta', 'Nitab4.5_0000420g0130' => 'nta', 'Nitab4.5_0000422g0030' => 'nta', 'Nitab4.5_0000560g0180' => 'nta', 'Nitab4.5_0000703g0100' => 'nta', 'Nitab4.5_0000786g0200' => 'nta', 'Nitab4.5_0001336g0020' => 'nta', 'Nitab4.5_0001796g0030' => 'nta', 'Nitab4.5_0003348g0060' => 'nta', 'Nitab4.5_0003698g0040' => 'nta', 'Nitab4.5_0003942g0090' => 'nta', 'Nitab4.5_0004775g0070' => 'nta', 'Nitab4.5_0004864g0030' => 'nta', 'Nitab4.5_0005615g0020' => 'nta', 'Nitab4.5_0009288g0030' => 'nta', 'Nitab4.5_0009341g0010' => 'nta', 'Nitab4.5_0009535g0010' => 'nta', 'Nn1g03995' => 'nnu', 'Nn1g04100' => 'nnu', 'Nn1g06530' => 'nnu', 'Nn3g16404' => 'nnu', 'Nn3g17212' => 'nnu', 'Nn3g20776' => 'nnu', 'Nn3g21923' => 'nnu', 'Nn5g27737' => 'nnu', 'Nn5g29461' => 'nnu', 'Nn7g38355' => 'nnu', 'Nn8g39873' => 'nnu', 'Oeu000548.2' => 'oeu', 'Oeu004672.1' => 'oeu', 'Oeu015605.2' => 'oeu', 'Oeu016092.1' => 'oeu', 'Oeu017879.3' => 'oeu', 'Oeu024910.1' => 'oeu', 'Oeu028965.1' => 'oeu', 'Oeu031269.1' => 'oeu', 'Oeu031270.1' => 'oeu', 'Oeu032535.1' => 'oeu', 'Oeu034151.1' => 'oeu', 'Oeu034152.1' => 'oeu', 'Oeu034588.2' => 'oeu', 'Oeu050846.1' => 'oeu', 'Oeu050849.2' => 'oeu', 'Oeu051063.2' => 'oeu', 'Oeu052368.1' => 'oeu', 'Oeu052370.1' => 'oeu', 'Os01g0210400' => 'osa', 'Os01g0304300' => 'osa', 'Os01g0749100' => 'osa', 'Os02g0745800' => 'osa', 'Os03g0769050' => 'osa', 'Os05g0531500' => 'osa', 'Os06g0724300' => 'osa', 'Os11g0198100' => 'osa', 'Peaxi162Scf00069g01425' => 'pax', 'Peaxi162Scf00280g00811' => 'pax', 'Peaxi162Scf00310g00615' => 'pax', 'Peaxi162Scf00362g00542' => 'pax', 'Peaxi162Scf00461g00310' => 'pax', 'Peaxi162Scf00530g00118' => 'pax', 'Peaxi162Scf00541g00057' => 'pax', 'Peaxi162Scf00661g00017' => 'pax', 'Peaxi162Scf00926g00027' => 'pax', 'Peaxi162Scf01064g00263' => 'pax', 'Peaxi162Scf01211g00135' => 'pax', 'PGR004G2336' => 'pgr', 'PGR042G0327' => 'pgr', 'PGR042G1957' => 'pgr', 'PGR042G2003' => 'pgr', 'PGR042G3929' => 'pgr', 'PGR083G1137' => 'pgr', 'PGR083G1364' => 'pgr', 'PGSC0003DMG400003381' => 'stu', 'PGSC0003DMG400003417' => 'stu', 'PGSC0003DMG400008981' => 'stu', 'PGSC0003DMG400012417' => 'stu', 'PGSC0003DMG400012823' => 'stu', 'PGSC0003DMG400016885' => 'stu', 'PGSC0003DMG400022812' => 'stu', 'PGSC0003DMG400029726' => 'stu', 'PGSC0003DMG401009243' => 'stu', 'PGSC0003DMG401031505' => 'stu', 'PGSC0003DMG402031505' => 'stu', 'Phvul.001G017600' => 'pvu', 'Phvul.002G193500' => 'pvu', 'Phvul.002G228900' => 'pvu', 'Phvul.002G236800' => 'pvu', 'Phvul.003G049500' => 'pvu', 'Phvul.005G072000' => 'pvu', 'Phvul.006G164800' => 'pvu', 'Phvul.006G185100' => 'pvu', 'Phvul.007G090000' => 'pvu', 'Potri.001G399800' => 'ptr', 'Potri.002G149900' => 'ptr', 'Potri.004G044100' => 'ptr', 'Potri.004G177600' => 'ptr', 'Potri.009G138000' => 'ptr', 'Potri.010G094000' => 'ptr', 'Potri.011G053000' => 'ptr', 'Potri.011G119300' => 'ptr', 'Potri.013G113700' => 'ptr', 'Potri.018G107800' => 'ptr', 'Potri.019G084100' => 'ptr', 'Pp3c14_23720' => 'ppa', 'Pp3c16_6340' => 'ppa', 'Pp3c23_13420' => 'ppa', 'Pp3c24_2740' => 'ppa', 'Pp3c25_860' => 'ppa', 'Pp3c8_21750' => 'ppa', 'Prupe.1G273000' => 'ppe', 'Prupe.1G273700' => 'ppe', 'Prupe.1G274100' => 'ppe', 'Prupe.2G023300' => 'ppe', 'Prupe.4G048000' => 'ppe', 'Prupe.4G080400' => 'ppe', 'Prupe.4G181200' => 'ppe', 'Prupe.8G056900' => 'ppe', 'Prupe.8G168700' => 'ppe', 'Psat1g189080' => 'psa', 'Psat1g204760' => 'psa', 'Psat4g175560' => 'psa', 'Psat4g177720' => 'psa', 'Psat5g244240' => 'psa', 'Psat6g010720' => 'psa', 'Psat6g187200' => 'psa', 'Psat7g072040' => 'psa', 'PSO017G3501' => 'pso', 'PSO063G2148' => 'pso', 'PSO063G5608' => 'pso', 'PSO210G6392' => 'pso', 'PSO541G2319' => 'pso', 'PSO541G2836' => 'pso', 'PSO541G4012' => 'pso', 'PSO541G6253' => 'pso', 'PSO675G0580' => 'pso', 'PSO675G0856' => 'pso', 'PSO675G5635' => 'pso', 'PSO675G9157' => 'pso', 'PSO832G1660' => 'pso', 'PSO832G1969' => 'pso', 'QL02p007186' => 'qlo', 'QL02p033904' => 'qlo', 'QL03p064391' => 'qlo', 'QL05p040593' => 'qlo', 'QL05p058242' => 'qlo', 'QL08p021825' => 'qlo', 'QL11p004981' => 'qlo', 'RcHm_v2.0_Chr1g0318301' => 'rch', 'RcHm_v2.0_Chr4g0418501' => 'rch', 'RcHm_v2.0_Chr4g0439971' => 'rch', 'RcHm_v2.0_Chr5g0008541' => 'rch', 'RcHm_v2.0_Chr5g0014101' => 'rch', 'RcHm_v2.0_Chr5g0014131' => 'rch', 'RcHm_v2.0_Chr5g0033621' => 'rch', 'RcHm_v2.0_Chr6g0272041' => 'rch', 'RcHm_v2.0_Chr6g0278831' => 'rch', 'Rhsim02G0130400' => 'rsi', 'Rhsim02G0171100' => 'rsi', 'Rhsim05G0053000' => 'rsi', 'Rhsim05G0053100' => 'rsi', 'Rhsim06G0096500' => 'rsi', 'Rhsim06G0096600' => 'rsi', 'Rhsim06G0199100' => 'rsi', 'Rhsim12G0062300' => 'rsi', 'Rhsim12G0062800' => 'rsi', 'Sabra02G0118600' => 'sbr', 'Sabra04G0027300' => 'sbr', 'Sabra04G0119500' => 'sbr', 'Sabra08G0112500' => 'sbr', 'Sabra11G0036800' => 'sbr', 'Sabra11G0103800' => 'sbr', 'Sabra13G0096300' => 'sbr', 'Sabra16G0262300' => 'sbr', 'Sabra18G0091700' => 'sbr', 'Sabra19G0095400' => 'sbr', 'SalBow6G3080' => 'sbo', 'SalBow7G1157' => 'sbo', 'SalBow7G2123' => 'sbo', 'SalBow7G2285' => 'sbo', 'SalBow7G3537' => 'sbo', 'SalBow8G2947' => 'sbo', 'SalBow8G4463' => 'sbo', 'SalBow8G5466' => 'sbo', 'Sc01g0001750' => 'sci', 'Sc02g0006640' => 'sci', 'Sc02g0006670' => 'sci', 'Sc04g0008220' => 'sci', 'Sc05g0006190' => 'sci', 'Sc08g0002760' => 'sci', 'Sc17g0006170' => 'sci', 'Sc22g0002050' => 'sci', 'Sc23g0001190' => 'sci', 'Sc24g0000980' => 'sci', 'Sed0006245' => 'sed', 'Sed0007543' => 'sed', 'Sed0009411' => 'sed', 'Sed0010765' => 'sed', 'Sed0012944' => 'sed', 'Sed0014682' => 'sed', 'Sed0016174' => 'sed', 'Sed0016796' => 'sed', 'Sed0020317' => 'sed', 'Sed0021467' => 'sed', 'SEGI_01316' => 'sgi', 'SEGI_03374' => 'sgi', 'SEGI_16265' => 'sgi', 'SEGI_18569' => 'sgi', 'SEGI_20351' => 'sgi', 'SEGI_26395' => 'sgi', 'SEGI_29469' => 'sgi', 'SEGI_34771' => 'sgi', 'SEGI_36769' => 'sgi', 'SEGI_37139' => 'sgi', 'SGA_v2.0_scaffold100G29687' => 'sas', 'SGA_v2.0_scaffold118G32472' => 'sas', 'SGA_v2.0_scaffold14G07051' => 'sas', 'SGA_v2.0_scaffold183G39845' => 'sas', 'SGA_v2.0_scaffold1G00174' => 'sas', 'SGA_v2.0_scaffold22G09714' => 'sas', 'SGA_v2.0_scaffold333G48992' => 'sas', 'SGA_v2.0_scaffold46G17491' => 'sas', 'SGA_v2.0_scaffold49G18294' => 'sas', 'SGA_v2.0_scaffold63G21658' => 'sas', 'SHI01741' => 'shi', 'SHI05771' => 'shi', 'SHI18077' => 'shi', 'SHI20525' => 'shi', 'SHI20527' => 'shi', 'SHI20528' => 'shi', 'SMO172G0185' => 'smo', 'SMO198G0020' => 'smo', 'SMO351G0006' => 'smo', 'SMO356G0118' => 'smo', 'SMO358G0296' => 'smo', 'SMO367G0079' => 'smo', 'SMO367G1277' => 'smo', 'Solyc01g014220.3' => 'sly', 'Solyc01g111770.2' => 'sly', 'Solyc02g078180.3' => 'sly', 'Solyc03g006430.3' => 'sly', 'Solyc03g006456.1' => 'sly', 'Solyc03g079860.2' => 'sly', 'Solyc04g079770.3' => 'sly', 'Solyc05g007430.4' => 'sly', 'Solyc07g063150.3' => 'sly', 'Solyc08g016620.3' => 'sly', 'Solyc09g057590.3' => 'sly', 'Solyc09g057600.1' => 'sly', 'Solyc10g009050.3' => 'sly', 'Solyc11g017420.2' => 'sly', 'Sopen01g053810' => 'spe', 'Sopen02g023040' => 'spe', 'Sopen03g002440' => 'spe', 'Sopen04g033350' => 'spe', 'Sopen05g003310' => 'spe', 'Sopen07g004050' => 'spe', 'Sopen07g031340' => 'spe', 'Sopen08g006990' => 'spe', 'Sopen10g004830' => 'spe', 'Sopen11g009370' => 'spe', 'Sp1g24450' => 'spa', 'Sp1g29670' => 'spa', 'Sp1g39600' => 'spa', 'Sp2g11080' => 'spa', 'Sp2g13970' => 'spa', 'Sp4g16130' => 'spa', 'Sp6g13080' => 'spa', 'Sp7g37270' => 'spa', 'TAR371G0065' => 'tar', 'TAR376G0340' => 'tar', 'TAR376G0435' => 'tar', 'TAR381G0002' => 'tar', 'TAR381G1236' => 'tar', 'TAR624G0055' => 'tar', 'TAR624G0324' => 'tar', 'TAR624G0696' => 'tar', 'TAR624G0906' => 'tar', 'TAR625G0107' => 'tar', 'TAR626G0015' => 'tar', 'TAR626G1356' => 'tar', 'TAR627G0888' => 'tar', 'TAR628G0399' => 'tar', 'TAR628G1327' => 'tar', 'TAR629G2831' => 'tar', 'TAR629G2874' => 'tar', 'TAR633G1432' => 'tar', 'TAR633G2771' => 'tar', 'THA.LOC104803394' => 'tha', 'THA.LOC104805153' => 'tha', 'THA.LOC104806784' => 'tha', 'THA.LOC104810473' => 'tha', 'THA.LOC104813100' => 'tha', 'THA.LOC104814215' => 'tha', 'THA.LOC104815554' => 'tha', 'THA.LOC104820544' => 'tha', 'THA.LOC104824754' => 'tha', 'THA.LOC104827717' => 'tha', 'Thecc.02G031400' => 'tca', 'Thecc.02G055900' => 'tca', 'Thecc.02G350800' => 'tca', 'Thecc.06G150900' => 'tca', 'Thecc.06G186600' => 'tca', 'Thecc.07G089600' => 'tca', 'Thecc.08G020400' => 'tca', 'Thecc.08G182100' => 'tca', 'Thhalv10000873m.g' => 'esa', 'Thhalv10004185m.g' => 'esa', 'Thhalv10006981m.g' => 'esa', 'Thhalv10007204m.g' => 'esa', 'Thhalv10011374m.g' => 'esa', 'Thhalv10013482m.g' => 'esa', 'Thhalv10017801m.g' => 'esa', 'Thhalv10024983m.g' => 'esa', 'TPR.G12072' => 'tpr', 'TPR.G15769' => 'tpr', 'TPR.G16504' => 'tpr', 'TPR.G16506' => 'tpr', 'TPR.G24345' => 'tpr', 'TPR.G26666' => 'tpr', 'TPR.G27320' => 'tpr', 'TPR.G31819' => 'tpr', 'TPR.G38879' => 'tpr', 'TPR.G39015' => 'tpr', 'TPR.G8819' => 'tpr', 'TWI09G0924' => 'twi', 'TWI12G0811' => 'twi', 'TWI12G1294' => 'twi', 'TWI31G0150' => 'twi', 'TWI36G1262' => 'twi', 'TWI38G1287' => 'twi', 'TWI38G1633' => 'twi', 'TWI38G1982' => 'twi', 'TWI39G0116' => 'twi', 'TWI60G1011' => 'twi', 'TWI63G0171' => 'twi', 'TWI73G0839' => 'twi', 'TWI79G1511' => 'twi', 'unitig_0.g915' => 'ugi', 'unitig_0.g916' => 'ugi', 'unitig_21.g20219' => 'ugi', 'unitig_21.g20416' => 'ugi', 'unitig_578.g16132' => 'ugi', 'unitig_578.g16718' => 'ugi', 'unitig_62.g23481' => 'ugi', 'unitig_744.g24535' => 'ugi', 'unitig_749.g13525' => 'ugi', 'vmacro01248' => 'vma', 'vmacro02290' => 'vma', 'vmacro10946' => 'vma', 'vmacro11865' => 'vma', 'vmacro12493' => 'vma', 'vmacro17322' => 'vma', 'vmacro21599' => 'vma', 'vmacro23041' => 'vma', 'VMungo0251G0004' => 'vmu', 'VMungo0251G2639' => 'vmu', 'VMungo0251G2967' => 'vmu', 'VMungo0540G0864' => 'vmu', 'VMungo0540G1569' => 'vmu', 'VMungo0647G0317' => 'vmu', 'VMungo0720G1373' => 'vmu', 'VMungo0720G1508' => 'vmu', 'VMungo1080G0485' => 'vmu', 'VMungo1215G3177' => 'vmu', 'Zm00001eb112600' => 'zma', 'Zm00001eb120220' => 'zma', 'Zm00001eb153240' => 'zma', 'Zm00001eb168880' => 'zma', 'Zm00001eb213920' => 'zma', 'Zm00001eb228280' => 'zma', 'Zm00001eb254580' => 'zma', 'Zm00001eb272180' => 'zma', 'Zm00001eb293190' => 'zma', 'Zm00001eb322930' => 'zma', 'Zm00001eb353360' => 'zma', 'Zm00001eb353390' => 'zma', 'Zm00001eb353430' => 'zma', 'Zm00001eb353440' => 'zma', 'Zm00001eb353780' => 'zma' ), 'gf_id' => 'HOM05D000499', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000499' ), 'data_identifier' => 'HOM05D000499', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000499', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1066', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p29780' => 'bna', 'A02p33180' => 'bna', 'A03p16470' => 'bna', 'A03p66010' => 'bna', 'A04p25970' => 'bna', 'A06p01270' => 'bna', 'A06p46080' => 'bna', 'A07p11400' => 'bna', 'A08p01840' => 'bna', 'A08p08230' => 'bna', 'A08p25740' => 'bna', 'A09p32070' => 'bna', 'A09p37830' => 'bna', 'A09p42840' => 'bna', 'A09p42850' => 'bna', 'Aa31LG10G2060' => 'aar', 'Aa31LG2G7410' => 'aar', 'Aa31LG6G10200' => 'aar', 'Aa31LG6G16680' => 'aar', 'Aa31LG6G8470' => 'aar', 'Aa31LG9G12730' => 'aar', 'Aa31LG9G13680' => 'aar', 'Aa31LG9G14920' => 'aar', 'Aa31LG9G6650' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4977' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5467' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3254' => 'aag', 'Actinidia02578' => 'ach', 'Actinidia07693' => 'ach', 'Actinidia08413' => 'ach', 'Actinidia08414' => 'ach', 'Actinidia15289' => 'ach', 'Actinidia19871' => 'ach', 'Actinidia21475' => 'ach', 'Actinidia22576' => 'ach', 'Actinidia28327' => 'ach', 'Actinidia32491' => 'ach', 'Actinidia39463' => 'ach', 'Actinidia39571' => 'ach', 'Ah.01g013750' => 'amhyb', 'Ah.01g023210' => 'amhyb', 'Ah.04g164850' => 'amhyb', 'Ah.05g178060' => 'amhyb', 'Ah.07g204270' => 'amhyb', 'Ah.07g208480' => 'amhyb', 'Ah.09g237410' => 'amhyb', 'Ah.14g089460' => 'amhyb', 'AL1G41790' => 'aly', 'AL1G49050' => 'aly', 'AL1G53810' => 'aly', 'AL1G61400' => 'aly', 'AL4G18580' => 'aly', 'AL5G12510' => 'aly', 'AL5G12540' => 'aly', 'AL6G43230' => 'aly', 'AL7G10370' => 'aly', 'AL7G19250' => 'aly', 'AL8G12240' => 'aly', 'AL8G18540' => 'aly', 'Aqoxy1G02409' => 'aox', 'Aqoxy2G03993' => 'aox', 'Aqoxy3G03357' => 'aox', 'Aqoxy4G00785' => 'aox', 'Aqoxy5G02598' => 'aox', 'Aqoxy6G00132' => 'aox', 'Aqoxy7G01776' => 'aox', 'Aqoxy7G02316' => 'aox', 'Aqoxy7G03973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.12AFKW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B8730' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27IQR1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3F75VG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3RE0GA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41TCQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.527VTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FIR39' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5W8UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DA38EV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ63HS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H1I32C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HC27T5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4M8AP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7N3CZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9UVDZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LS1NQA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT1D4B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SKC4TM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCFV76' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF9Q1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQWD9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1ZM88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WE07RT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YCK7VH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJE6Q6' => 'arhy', 'AT1G28240' => 'ath', 'AT1G34550' => 'ath', 'AT1G53040' => 'ath', 'AT2G02910' => 'ath', 'AT4G09630' => 'ath', 'AT4G38500' => 'ath', 'AT5G42660' => 'ath', 'AT5G46220' => 'ath', 'ATR0152G026' => 'atr', 'ATR0564G343' => 'atr', 'ATR0706G151' => 'atr', 'ATR0733G207' => 'atr', 'ATR0751G234' => 'atr', 'ATR0807G048' => 'atr', 'ATR1091G084' => 'atr', 'Atru.chr10.1229' => 'acertr', 'Atru.chr10.1230' => 'acertr', 'Atru.chr10.1874' => 'acertr', 'Atru.chr11.1808' => 'acertr', 'Atru.chr13.1795' => 'acertr', 'Atru.chr13.570' => 'acertr', 'Atru.chr2.2608' => 'acertr', 'Atru.chr2.2609' => 'acertr', 'Atru.chr5.3428' => 'acertr', 'Atru.chr8.1171' => 'acertr', 'AUR62004651' => 'cqu', 'AUR62008675' => 'cqu', 'AUR62010014' => 'cqu', 'AUR62013004' => 'cqu', 'AUR62014825' => 'cqu', 'AUR62015015' => 'cqu', 'AUR62015151' => 'cqu', 'AUR62017020' => 'cqu', 'AUR62019422' => 'cqu', 'AUR62023570' => 'cqu', 'AUR62025571' => 'cqu', 'AUR62029098' => 'cqu', 'AUR62033863' => 'cqu', 'AUR62034296' => 'cqu', 'AUR62040075' => 'cqu', 'BcaB02g07334' => 'bca', 'BcaB02g10575' => 'bca', 'BcaB03g12119' => 'bca', 'BcaB03g12120' => 'bca', 'BcaB03g13945' => 'bca', 'BcaB04g17123' => 'bca', 'BcaB04g17867' => 'bca', 'BcaB04g19839' => 'bca', 'BcaB07g30317' => 'bca', 'BcaB07g32432' => 'bca', 'BcaB07g33362' => 'bca', 'BcaB08g36611' => 'bca', 'BcaC01g00028' => 'bca', 'BcaC01g01356' => 'bca', 'BcaC01g02034' => 'bca', 'BcaC01g06051' => 'bca', 'BcaC03g16839' => 'bca', 'BcaC03g17176' => 'bca', 'BcaC05g26829' => 'bca', 'BcaC06g31490' => 'bca', 'BcaC06g35344' => 'bca', 'BcaC06g36570' => 'bca', 'BcaC07g37537' => 'bca', 'BcaC08g43491' => 'bca', 'BcaC08g43773' => 'bca', 'BcaNung00234' => 'bca', 'BcaNung01982' => 'bca', 'BcaNung03707' => 'bca', 'BcaNung06454' => 'bca', 'BolC2t10762H' => 'bol', 'BolC2t11191H' => 'bol', 'BolC3t14322H' => 'bol', 'BolC3t19747H' => 'bol', 'BolC3t21425H' => 'bol', 'BolC4t27800H' => 'bol', 'BolC5t31423H' => 'bol', 'BolC6t35951H' => 'bol', 'BolC6t36282H' => 'bol', 'BolC7t40678H' => 'bol', 'BolC7t40679H' => 'bol', 'BolC7t42222H' => 'bol', 'BolC7t43492H' => 'bol', 'BolC7t46785H' => 'bol', 'BolC8t47853H' => 'bol', 'BolC9t56805H' => 'bol', 'BraA02t08000Z' => 'bra', 'BraA02t08341Z' => 'bra', 'BraA03t10936Z' => 'bra', 'BraA03t15657Z' => 'bra', 'BraA04t18100Z' => 'bra', 'BraA05t20523Z' => 'bra', 'BraA06t23353Z' => 'bra', 'BraA06t27473Z' => 'bra', 'BraA06t27769Z' => 'bra', 'BraA07t28928Z' => 'bra', 'BraA08t32236Z' => 'bra', 'BraA08t32841Z' => 'bra', 'BraA08t34524Z' => 'bra', 'BraA09t38742Z' => 'bra', 'BraA09t39295Z' => 'bra', 'C02p47180' => 'bna', 'C02p50990' => 'bna', 'C03p19360' => 'bna', 'C03p74950' => 'bna', 'C03p91000' => 'bna', 'C04p63260' => 'bna', 'C05p27050' => 'bna', 'C06p08750' => 'bna', 'C06p11490' => 'bna', 'C07p02820' => 'bna', 'C07p17180' => 'bna', 'C07p29440' => 'bna', 'C07p63730' => 'bna', 'C09p39260' => 'bna', 'CAN.G1164.34' => 'can', 'CAN.G1164.39' => 'can', 'CAN.G1530.3' => 'can', 'CAN.G162.61' => 'can', 'CAN.G176.6' => 'can', 'CAN.G289.49' => 'can', 'CAN.G370.21' => 'can', 'CAN.G370.22' => 'can', 'CAN.G371.117' => 'can', 'CAN.G58.37' => 'can', 'CAN.G588.98' => 'can', 'CANSAT21G2266' => 'cansat', 'CANSAT25G2799' => 'cansat', 'CANSAT35G0862' => 'cansat', 'CANSAT35G1704' => 'cansat', 'CANSAT35G1760' => 'cansat', 'CANSAT56G3971' => 'cansat', 'CANSAT56G4116' => 'cansat', 'CANSAT80G1259' => 'cansat', 'CARHR027730' => 'chi', 'CARHR033880' => 'chi', 'CARHR043270' => 'chi', 'CARHR145330' => 'chi', 'CARHR145340' => 'chi', 'CARHR175570' => 'chi', 'CARHR181570' => 'chi', 'CARHR258470' => 'chi', 'CARHR260490' => 'chi', 'CARHR294220' => 'chi', 'Carub.0001s2668' => 'cru', 'Carub.0001s3257' => 'cru', 'Carub.0001s4220' => 'cru', 'Carub.0005s0179' => 'cru', 'Carub.0006s2807' => 'cru', 'Carub.0007s0039' => 'cru', 'Carub.0008s0169' => 'cru', 'Carub.0008s0636' => 'cru', 'Ca_00338_v3' => 'car', 'Ca_00542_v3' => 'car', 'Ca_01844_v3' => 'car', 'Ca_10611_v3' => 'car', 'Ca_13326_v3' => 'car', 'Ca_17944_v3' => 'car', 'Ca_18546_v3' => 'car', 'Ca_24219_v3' => 'car', 'Ca_29972_v3' => 'car', 'CBR_g3681' => 'cbr', 'CBR_g40021' => 'cbr', 'Cc01_g08140' => 'ccan', 'Cc02_g13410' => 'ccan', 'Cc02_g37480' => 'ccan', 'Cc05_g12030' => 'ccan', 'Cc09_g03370' => 'ccan', 'Cc09_g10300' => 'ccan', 'Cc10_g03530' => 'ccan', 'Cc10_g11380' => 'ccan', 'CDE01G0176' => 'cde', 'CDE02G0675' => 'cde', 'CDE02G0942' => 'cde', 'CDE02G1153' => 'cde', 'CDE02G4177' => 'cde', 'CDE04G2117' => 'cde', 'CDE04G2736' => 'cde', 'CDE08G1161' => 'cde', 'CDE09G1238' => 'cde', 'Cfa000467' => 'cfa', 'Cfa000947' => 'cfa', 'Cfa004969' => 'cfa', 'Cfa005284' => 'cfa', 'Cfa008993' => 'cfa', 'Cfa018187' => 'cfa', 'Cfa018454' => 'cfa', 'Cfa020585' => 'cfa', 'Ciclev10000424m.g' => 'ccl', 'Ciclev10003605m.g' => 'ccl', 'Ciclev10007828m.g' => 'ccl', 'Ciclev10014620m.g' => 'ccl', 'Ciclev10015169m.g' => 'ccl', 'Ciclev10018291m.g' => 'ccl', 'Ciclev10028256m.g' => 'ccl', 'Ciclev10033822m.g' => 'ccl', 'CiPaw.05G060300' => 'cil', 'CiPaw.05G085000' => 'cil', 'CiPaw.06G083700' => 'cil', 'CiPaw.06G120300' => 'cil', 'CiPaw.09G060500' => 'cil', 'CiPaw.09G123800' => 'cil', 'CiPaw.11G169700' => 'cil', 'CiPaw.12G118300' => 'cil', 'CiPaw.15G071000' => 'cil', 'CiPaw.15G081900' => 'cil', 'ClCG01G024610' => 'cla', 'ClCG03G006070' => 'cla', 'ClCG05G019250' => 'cla', 'ClCG09G009500' => 'cla', 'ClCG11G008200' => 'cla', 'ClCG11G018080' => 'cla', 'COL.COLO4_17373' => 'col', 'COL.COLO4_22994' => 'col', 'COL.COLO4_26389' => 'col', 'COL.COLO4_27170' => 'col', 'COL.COLO4_31074' => 'col', 'COL.COLO4_31465' => 'col', 'COL.COLO4_36438' => 'col', 'COL.COLO4_36439' => 'col', 'Cpa.g.c38781' => 'cpa', 'Cpa.g.sc128.12' => 'cpa', 'Cpa.g.sc166.7' => 'cpa', 'Cpa.g.sc166.8' => 'cpa', 'Cpa.g.sc20.111' => 'cpa', 'Cpa.g.sc27.31' => 'cpa', 'Cpa.g.sc64.36' => 'cpa', 'Cpa.g.sc64.37' => 'cpa', 'Cpa.g.sc66.49' => 'cpa', 'Cpa.g.sc80.64' => 'cpa', 'CsaV3_1G012320' => 'csa', 'CsaV3_2G008480' => 'csa', 'CsaV3_2G033450' => 'csa', 'CsaV3_3G044830' => 'csa', 'CsaV3_4G033710' => 'csa', 'CsaV3_6G051730' => 'csa', 'CsaV3_7G025350' => 'csa', 'CSS0001067' => 'camsi', 'CSS0005996' => 'camsi', 'CSS0006590' => 'camsi', 'CSS0009673' => 'camsi', 'CSS0010201' => 'camsi', 'CSS0010549' => 'camsi', 'CSS0011364' => 'camsi', 'CSS0014473' => 'camsi', 'CSS0014961' => 'camsi', 'CSS0020191' => 'camsi', 'CSS0021165' => 'camsi', 'CSS0022306' => 'camsi', 'CSS0030591' => 'camsi', 'CSS0030696' => 'camsi', 'CSS0032653' => 'camsi', 'CSS0037487' => 'camsi', 'CSS0041102' => 'camsi', 'CSS0041261' => 'camsi', 'CSS0046246' => 'camsi', 'CSS0049256' => 'camsi', 'DCAR_004075' => 'dca', 'DCAR_011538' => 'dca', 'DCAR_019553' => 'dca', 'DCAR_020952' => 'dca', 'DCAR_021739' => 'dca', 'DCAR_027407' => 'dca', 'DCAR_027913' => 'dca', 'DCAR_028066' => 'dca', 'Dinv05899' => 'din', 'Dinv07563' => 'din', 'Dinv08010' => 'din', 'Dinv14125' => 'din', 'Dinv20172' => 'din', 'Dinv30743' => 'din', 'Dinv31229' => 'din', 'Dinv34162' => 'din', 'Dinv36028' => 'din', 'Dinv39368' => 'din', 'Dinv40565' => 'din', 'Dinv41706' => 'din', 'Duzib052G0089' => 'dzi', 'Duzib116G0641' => 'dzi', 'Duzib132G0069' => 'dzi', 'Duzib132G1219' => 'dzi', 'Duzib147G0278' => 'dzi', 'Duzib160G0480' => 'dzi', 'Duzib170G0661' => 'dzi', 'Duzib177G0591' => 'dzi', 'Duzib187G1353' => 'dzi', 'Duzib192G0858' => 'dzi', 'Duzib192G0883' => 'dzi', 'Duzib213G0506' => 'dzi', 'Duzib235G0289' => 'dzi', 'Duzib251G0422' => 'dzi', 'ECA232G3898' => 'eca', 'ECA233G5950' => 'eca', 'ECA234G1699' => 'eca', 'ECA234G2421' => 'eca', 'ECA236G0426' => 'eca', 'ECA236G4331' => 'eca', 'ECA248G2573' => 'eca', 'EL10Ac1g00077' => 'bvu', 'EL10Ac1g01746' => 'bvu', 'EL10Ac2g03464' => 'bvu', 'EL10Ac4g08176' => 'bvu', 'EL10Ac7g17521' => 'bvu', 'EL10Ac8g20386' => 'bvu', 'EL10Ac9g21343' => 'bvu', 'EL10Ac9g22688' => 'bvu', 'Eucgr.B03434' => 'egr', 'Eucgr.D00618' => 'egr', 'Eucgr.E02395' => 'egr', 'Eucgr.F01129' => 'egr', 'Eucgr.F02622' => 'egr', 'Eucgr.F04207' => 'egr', 'FAN01G0570' => 'fan', 'FAN03G3351' => 'fan', 'FAN06G3702' => 'fan', 'FAN07G2149' => 'fan', 'FAN10G3758' => 'fan', 'FAN11G1170' => 'fan', 'FAN11G2050' => 'fan', 'FAN11G2724' => 'fan', 'FAN12G1700' => 'fan', 'FAN12G2028' => 'fan', 'FAN15G1160' => 'fan', 'FAN15G3063' => 'fan', 'FAN16G2540' => 'fan', 'FAN16G3077' => 'fan', 'FAN16G3624' => 'fan', 'FAN17G0221' => 'fan', 'FAN20G2492' => 'fan', 'FAN20G2905' => 'fan', 'FAN21G0548' => 'fan', 'FAN21G1300' => 'fan', 'FAN22G0077' => 'fan', 'FAN22G1315' => 'fan', 'FAN24G1280' => 'fan', 'FAN24G1445' => 'fan', 'FAN24G3527' => 'fan', 'FAN25G0464' => 'fan', 'FAN25G2885' => 'fan', 'FAN25G3270' => 'fan', 'FAN27G1101' => 'fan', 'FAN27G2846' => 'fan', 'FAN27G3524' => 'fan', 'FvH4_2g11770' => 'fve', 'FvH4_2g15630' => 'fve', 'FvH4_3g05570' => 'fve', 'FvH4_3g09110' => 'fve', 'FvH4_3g19940' => 'fve', 'FvH4_4g04821' => 'fve', 'FvH4_4g31480' => 'fve', 'FvH4_7g01740' => 'fve', 'Glyma.05G130400' => 'gma', 'Glyma.05G156400' => 'gma', 'Glyma.07G197000' => 'gma', 'Glyma.08G085151' => 'gma', 'Glyma.08G114500' => 'gma', 'Glyma.08G300400' => 'gma', 'Glyma.10G215800' => 'gma', 'Glyma.12G224400' => 'gma', 'Glyma.13G179300' => 'gma', 'Glyma.13G218151' => 'gma', 'Glyma.13G238800' => 'gma', 'Glyma.13G276900' => 'gma', 'Glyma.14G078200' => 'gma', 'Glyma.15G074500' => 'gma', 'Glyma.15G094100' => 'gma', 'Glyma.17G247200' => 'gma', 'Glyma.18G120100' => 'gma', 'Glyma.20G176000' => 'gma', 'Gohir.A01G063600' => 'ghi', 'Gohir.A01G170301' => 'ghi', 'Gohir.A02G060500' => 'ghi', 'Gohir.A05G133850' => 'ghi', 'Gohir.A05G161400' => 'ghi', 'Gohir.A06G012900' => 'ghi', 'Gohir.A06G035901' => 'ghi', 'Gohir.A06G127100' => 'ghi', 'Gohir.A06G210500' => 'ghi', 'Gohir.A08G008650' => 'ghi', 'Gohir.A09G072700' => 'ghi', 'Gohir.A09G088301' => 'ghi', 'Gohir.A10G040600' => 'ghi', 'Gohir.A12G036300' => 'ghi', 'Gohir.A12G143350' => 'ghi', 'Gohir.A12G165500' => 'ghi', 'Gohir.A13G145700' => 'ghi', 'Gohir.D01G050000' => 'ghi', 'Gohir.D01G051366' => 'ghi', 'Gohir.D01G161350' => 'ghi', 'Gohir.D02G065900' => 'ghi', 'Gohir.D05G164200' => 'ghi', 'Gohir.D05G355500' => 'ghi', 'Gohir.D06G010400' => 'ghi', 'Gohir.D06G111250' => 'ghi', 'Gohir.D06G132000' => 'ghi', 'Gohir.D06G210500' => 'ghi', 'Gohir.D07G165675' => 'ghi', 'Gohir.D08G062240' => 'ghi', 'Gohir.D08G086101' => 'ghi', 'Gohir.D08G138060' => 'ghi', 'Gohir.D09G072300' => 'ghi', 'Gohir.D10G041400' => 'ghi', 'Gohir.D11G191020' => 'ghi', 'Gohir.D11G212066' => 'ghi', 'Gohir.D12G036300' => 'ghi', 'Gohir.D12G168600' => 'ghi', 'Gohir.D13G150600' => 'ghi', 'Gorai.001G057300' => 'gra', 'Gorai.002G069900' => 'gra', 'Gorai.002G200000' => 'gra', 'Gorai.003G067600' => 'gra', 'Gorai.005G074800' => 'gra', 'Gorai.006G087300' => 'gra', 'Gorai.008G037500' => 'gra', 'Gorai.008G181400' => 'gra', 'Gorai.009G169400' => 'gra', 'Gorai.009G387900' => 'gra', 'Gorai.010G013300' => 'gra', 'Gorai.010G153800' => 'gra', 'Gorai.010G255800' => 'gra', 'Gorai.011G043700' => 'gra', 'Gorai.011G198900' => 'gra', 'Gorai.013G168400' => 'gra', 'GSVIVG01005212001' => 'vvi', 'GSVIVG01006163001' => 'vvi', 'GSVIVG01009625001' => 'vvi', 'GSVIVG01014338001' => 'vvi', 'GSVIVG01020005001' => 'vvi', 'GSVIVG01021450001' => 'vvi', 'GSVIVG01023975001' => 'vvi', 'GSVIVG01034490001' => 'vvi', 'HanXRQChr04g0112071' => 'han', 'HanXRQChr05g0131151' => 'han', 'HanXRQChr09g0262371' => 'han', 'HanXRQChr09g0268401' => 'han', 'HanXRQChr10g0279241' => 'han', 'HanXRQChr10g0297961' => 'han', 'HanXRQChr11g0326231' => 'han', 'HanXRQChr11g0328471' => 'han', 'HanXRQChr16g0507941' => 'han', 'HanXRQChr17g0560211' => 'han', 'Haze_02108' => 'cav', 'Haze_02428' => 'cav', 'Haze_05593' => 'cav', 'Haze_06448' => 'cav', 'Haze_09427' => 'cav', 'Haze_12022' => 'cav', 'Haze_17612' => 'cav', 'Haze_17928' => 'cav', 'Hma1.2p1_0032F.1_g019250' => 'hma', 'Hma1.2p1_0163F.1_g072690' => 'hma', 'Hma1.2p1_0265F.1_g106710' => 'hma', 'Hma1.2p1_0286F.1_g113970' => 'hma', 'Hma1.2p1_0363F.1_g136640' => 'hma', 'Hma1.2p1_0584F.1_g183470' => 'hma', 'Hma1.2p1_0885F.1_g232570' => 'hma', 'HPP92_006022' => 'vpl', 'HPP92_007320' => 'vpl', 'HPP92_011521' => 'vpl', 'HPP92_019387' => 'vpl', 'HPP92_024038' => 'vpl', 'Hund05891' => 'sun', 'Hund06450' => 'sun', 'Hund12053' => 'sun', 'Hund16800' => 'sun', 'Hund21222' => 'sun', 'Hund22896' => 'sun', 'Hund23746' => 'sun', 'Hund27083' => 'sun', 'Lalb_Chr02g0141831' => 'lal', 'Lalb_Chr02g0141841' => 'lal', 'Lalb_Chr05g0220411' => 'lal', 'Lalb_Chr06g0162081' => 'lal', 'Lalb_Chr09g0327651' => 'lal', 'Lalb_Chr13g0295051' => 'lal', 'Lalb_Chr15g0086801' => 'lal', 'Lalb_Chr16g0383781' => 'lal', 'Lalb_Chr16g0383791' => 'lal', 'Lalb_Chr18g0055441' => 'lal', 'Lalb_Chr18g0059611' => 'lal', 'Lalb_Chr20g0109661' => 'lal', 'Lalb_Chr20g0109831' => 'lal', 'Lalb_Chr20g0121871' => 'lal', 'Lalb_Chr22g0355361' => 'lal', 'Lalb_Chr25g0286371' => 'lal', 'Lj1A1187G43' => 'lonja', 'Lj1A1205T50' => 'lonja', 'Lj1A800G33' => 'lonja', 'Lj1C1187T7' => 'lonja', 'Lj1C843T11' => 'lonja', 'Lj1g0010940' => 'lja', 'Lj2A288T69' => 'lonja', 'Lj3g0024276' => 'lja', 'Lj4A47T76' => 'lonja', 'Lj4g0005805' => 'lja', 'Lj4g0006097' => 'lja', 'Lj4g0008528' => 'lja', 'Lj4g0024907' => 'lja', 'Lj5g0012472' => 'lja', 'Lj5g0018648' => 'lja', 'Lj6C789G1' => 'lonja', 'Lj6g0004000' => 'lja', 'Lj7A292G67' => 'lonja', 'Lj7A292T64' => 'lonja', 'Lj9A400T58' => 'lonja', 'Lsat_1_v5_gn_1_126181' => 'lsa', 'Lsat_1_v5_gn_4_123041' => 'lsa', 'Lsat_1_v5_gn_4_133620' => 'lsa', 'Lsat_1_v5_gn_4_53221' => 'lsa', 'Lsat_1_v5_gn_4_71961' => 'lsa', 'Lsat_1_v5_gn_7_105241' => 'lsa', 'Lsat_1_v5_gn_7_21361' => 'lsa', 'Lsat_1_v5_gn_7_28860' => 'lsa', 'Lsat_1_v5_gn_7_31260' => 'lsa', 'Lsat_1_v5_gn_8_52801' => 'lsa', 'Manes.02G191400' => 'mes', 'Manes.03G110100' => 'mes', 'Manes.04G071100' => 'mes', 'Manes.05G100500' => 'mes', 'Manes.05G164700' => 'mes', 'Manes.15G087000' => 'mes', 'Manes.15G121500' => 'mes', 'Manes.16G028300' => 'mes', 'Manes.17G046100' => 'mes', 'Manes.17G069800' => 'mes', 'Manes.18G100500' => 'mes', 'Mapoly0002s0109' => 'mpo', 'Mapoly0024s0007' => 'mpo', 'Mapoly0089s0032' => 'mpo', 'MBI04_g42241_MAGBIO' => 'mbi', 'MBI05_g11988_MAGBIO' => 'mbi', 'MBI05_g35452_MAGBIO' => 'mbi', 'MBI07_g30179_MAGBIO' => 'mbi', 'MBI07_g35859_MAGBIO' => 'mbi', 'MBI07_g35860_MAGBIO' => 'mbi', 'MBI07_g37166_MAGBIO' => 'mbi', 'MBI08_g18172_MAGBIO' => 'mbi', 'MBI09_g08441_MAGBIO' => 'mbi', 'MBI13_g01676_MAGBIO' => 'mbi', 'MBI14_g42955_MAGBIO' => 'mbi', 'MBI16_g13161_MAGBIO' => 'mbi', 'MBI17_g27204_MAGBIO' => 'mbi', 'MBI19_g21595_MAGBIO' => 'mbi', 'MD00G1148400' => 'mdo', 'MD02G1301200' => 'mdo', 'MD03G1227800' => 'mdo', 'MD05G1041100' => 'mdo', 'MD05G1124800' => 'mdo', 'MD05G1284000' => 'mdo', 'MD05G1338800' => 'mdo', 'MD05G1338900' => 'mdo', 'MD07G1022800' => 'mdo', 'MD10G1047500' => 'mdo', 'MD10G1127500' => 'mdo', 'MD10G1262300' => 'mdo', 'MD10G1293800' => 'mdo', 'MD16G1074300' => 'mdo', 'Medtr1g021670' => 'mtr', 'Medtr1g096320' => 'mtr', 'Medtr2g013690' => 'mtr', 'Medtr2g019450' => 'mtr', 'Medtr2g085170' => 'mtr', 'Medtr4g088785' => 'mtr', 'Medtr8g055930' => 'mtr', 'Medtr8g085850' => 'mtr', 'MELO3C002605.2' => 'cme', 'MELO3C003891.2' => 'cme', 'MELO3C004012.2' => 'cme', 'MELO3C007134.2' => 'cme', 'MELO3C008118.2' => 'cme', 'MELO3C016700.2' => 'cme', 'MELO3C024127.2' => 'cme', 'MELO3C033361.2' => 'cme', 'MELO3C033362.2' => 'cme', 'Migut.C00430' => 'egut', 'Migut.C01246' => 'egut', 'Migut.E00101' => 'egut', 'Migut.H01486' => 'egut', 'Migut.H01939' => 'egut', 'Migut.K00360' => 'egut', 'Migut.M00910' => 'egut', 'Migut.M01139' => 'egut', 'Migut.N02677' => 'egut', 'MSTRG.13252' => 'ama', 'MSTRG.14701' => 'ama', 'MSTRG.1521' => 'ama', 'MSTRG.15884' => 'ama', 'MSTRG.16242' => 'ama', 'MSTRG.22285' => 'ama', 'MSTRG.22444' => 'ama', 'MSTRG.2349' => 'ama', 'MSTRG.26308' => 'ama', 'MSTRG.28296' => 'ama', 'MSTRG.9895' => 'ama', 'Nitab4.5_0000110g0060' => 'nta', 'Nitab4.5_0000420g0130' => 'nta', 'Nitab4.5_0000422g0030' => 'nta', 'Nitab4.5_0000560g0180' => 'nta', 'Nitab4.5_0000703g0100' => 'nta', 'Nitab4.5_0000786g0200' => 'nta', 'Nitab4.5_0001336g0020' => 'nta', 'Nitab4.5_0001796g0030' => 'nta', 'Nitab4.5_0003348g0060' => 'nta', 'Nitab4.5_0003698g0040' => 'nta', 'Nitab4.5_0003942g0090' => 'nta', 'Nitab4.5_0004775g0070' => 'nta', 'Nitab4.5_0004864g0030' => 'nta', 'Nitab4.5_0005615g0020' => 'nta', 'Nitab4.5_0009288g0030' => 'nta', 'Nitab4.5_0009341g0010' => 'nta', 'Nitab4.5_0009535g0010' => 'nta', 'Nn1g03995' => 'nnu', 'Nn1g04100' => 'nnu', 'Nn1g06530' => 'nnu', 'Nn3g16404' => 'nnu', 'Nn3g17212' => 'nnu', 'Nn3g20776' => 'nnu', 'Nn3g21923' => 'nnu', 'Nn5g27737' => 'nnu', 'Nn5g29461' => 'nnu', 'Nn7g38355' => 'nnu', 'Nn8g39873' => 'nnu', 'Oeu000548.2' => 'oeu', 'Oeu004672.1' => 'oeu', 'Oeu015605.2' => 'oeu', 'Oeu016092.1' => 'oeu', 'Oeu017879.3' => 'oeu', 'Oeu024910.1' => 'oeu', 'Oeu028965.1' => 'oeu', 'Oeu031269.1' => 'oeu', 'Oeu031270.1' => 'oeu', 'Oeu032535.1' => 'oeu', 'Oeu034151.1' => 'oeu', 'Oeu034152.1' => 'oeu', 'Oeu034588.2' => 'oeu', 'Oeu050846.1' => 'oeu', 'Oeu050849.2' => 'oeu', 'Oeu051063.2' => 'oeu', 'Oeu052368.1' => 'oeu', 'Oeu052370.1' => 'oeu', 'Os01g0210400' => 'osa', 'Os01g0304300' => 'osa', 'Os01g0749100' => 'osa', 'Os02g0745800' => 'osa', 'Os03g0769050' => 'osa', 'Os05g0531500' => 'osa', 'Os06g0724300' => 'osa', 'Os11g0198100' => 'osa', 'Peaxi162Scf00069g01425' => 'pax', 'Peaxi162Scf00280g00811' => 'pax', 'Peaxi162Scf00310g00615' => 'pax', 'Peaxi162Scf00362g00542' => 'pax', 'Peaxi162Scf00461g00310' => 'pax', 'Peaxi162Scf00530g00118' => 'pax', 'Peaxi162Scf00541g00057' => 'pax', 'Peaxi162Scf00661g00017' => 'pax', 'Peaxi162Scf00926g00027' => 'pax', 'Peaxi162Scf01064g00263' => 'pax', 'Peaxi162Scf01211g00135' => 'pax', 'PGR004G2336' => 'pgr', 'PGR042G0327' => 'pgr', 'PGR042G1957' => 'pgr', 'PGR042G2003' => 'pgr', 'PGR042G3929' => 'pgr', 'PGR083G1137' => 'pgr', 'PGR083G1364' => 'pgr', 'PGSC0003DMG400003381' => 'stu', 'PGSC0003DMG400003417' => 'stu', 'PGSC0003DMG400008981' => 'stu', 'PGSC0003DMG400012417' => 'stu', 'PGSC0003DMG400012823' => 'stu', 'PGSC0003DMG400016885' => 'stu', 'PGSC0003DMG400022812' => 'stu', 'PGSC0003DMG400029726' => 'stu', 'PGSC0003DMG401009243' => 'stu', 'PGSC0003DMG401031505' => 'stu', 'PGSC0003DMG402031505' => 'stu', 'Phvul.001G017600' => 'pvu', 'Phvul.002G193500' => 'pvu', 'Phvul.002G228900' => 'pvu', 'Phvul.002G236800' => 'pvu', 'Phvul.003G049500' => 'pvu', 'Phvul.005G072000' => 'pvu', 'Phvul.006G164800' => 'pvu', 'Phvul.006G185100' => 'pvu', 'Phvul.007G090000' => 'pvu', 'Potri.001G399800' => 'ptr', 'Potri.002G149900' => 'ptr', 'Potri.004G044100' => 'ptr', 'Potri.004G177600' => 'ptr', 'Potri.009G138000' => 'ptr', 'Potri.010G094000' => 'ptr', 'Potri.011G053000' => 'ptr', 'Potri.011G119300' => 'ptr', 'Potri.013G113700' => 'ptr', 'Potri.018G107800' => 'ptr', 'Potri.019G084100' => 'ptr', 'Pp3c14_23720' => 'ppa', 'Pp3c16_6340' => 'ppa', 'Pp3c23_13420' => 'ppa', 'Pp3c24_2740' => 'ppa', 'Pp3c25_860' => 'ppa', 'Pp3c8_21750' => 'ppa', 'Prupe.1G273000' => 'ppe', 'Prupe.1G273700' => 'ppe', 'Prupe.1G274100' => 'ppe', 'Prupe.2G023300' => 'ppe', 'Prupe.4G048000' => 'ppe', 'Prupe.4G080400' => 'ppe', 'Prupe.4G181200' => 'ppe', 'Prupe.8G056900' => 'ppe', 'Prupe.8G168700' => 'ppe', 'Psat1g189080' => 'psa', 'Psat1g204760' => 'psa', 'Psat4g175560' => 'psa', 'Psat4g177720' => 'psa', 'Psat5g244240' => 'psa', 'Psat6g010720' => 'psa', 'Psat6g187200' => 'psa', 'Psat7g072040' => 'psa', 'PSO017G3501' => 'pso', 'PSO063G2148' => 'pso', 'PSO063G5608' => 'pso', 'PSO210G6392' => 'pso', 'PSO541G2319' => 'pso', 'PSO541G2836' => 'pso', 'PSO541G4012' => 'pso', 'PSO541G6253' => 'pso', 'PSO675G0580' => 'pso', 'PSO675G0856' => 'pso', 'PSO675G5635' => 'pso', 'PSO675G9157' => 'pso', 'PSO832G1660' => 'pso', 'PSO832G1969' => 'pso', 'QL02p007186' => 'qlo', 'QL02p033904' => 'qlo', 'QL03p064391' => 'qlo', 'QL05p040593' => 'qlo', 'QL05p058242' => 'qlo', 'QL08p021825' => 'qlo', 'QL11p004981' => 'qlo', 'RcHm_v2.0_Chr1g0318301' => 'rch', 'RcHm_v2.0_Chr4g0418501' => 'rch', 'RcHm_v2.0_Chr4g0439971' => 'rch', 'RcHm_v2.0_Chr5g0008541' => 'rch', 'RcHm_v2.0_Chr5g0014101' => 'rch', 'RcHm_v2.0_Chr5g0014131' => 'rch', 'RcHm_v2.0_Chr5g0033621' => 'rch', 'RcHm_v2.0_Chr6g0272041' => 'rch', 'RcHm_v2.0_Chr6g0278831' => 'rch', 'Rhsim02G0130400' => 'rsi', 'Rhsim02G0171100' => 'rsi', 'Rhsim05G0053000' => 'rsi', 'Rhsim05G0053100' => 'rsi', 'Rhsim06G0096500' => 'rsi', 'Rhsim06G0096600' => 'rsi', 'Rhsim06G0199100' => 'rsi', 'Rhsim12G0062300' => 'rsi', 'Rhsim12G0062800' => 'rsi', 'Sabra02G0118600' => 'sbr', 'Sabra04G0027300' => 'sbr', 'Sabra04G0119500' => 'sbr', 'Sabra08G0112500' => 'sbr', 'Sabra11G0036800' => 'sbr', 'Sabra11G0103800' => 'sbr', 'Sabra13G0096300' => 'sbr', 'Sabra16G0262300' => 'sbr', 'Sabra18G0091700' => 'sbr', 'Sabra19G0095400' => 'sbr', 'SalBow6G3080' => 'sbo', 'SalBow7G1157' => 'sbo', 'SalBow7G2123' => 'sbo', 'SalBow7G2285' => 'sbo', 'SalBow7G3537' => 'sbo', 'SalBow8G2947' => 'sbo', 'SalBow8G4463' => 'sbo', 'SalBow8G5466' => 'sbo', 'Sc01g0001750' => 'sci', 'Sc02g0006640' => 'sci', 'Sc02g0006670' => 'sci', 'Sc04g0008220' => 'sci', 'Sc05g0006190' => 'sci', 'Sc08g0002760' => 'sci', 'Sc17g0006170' => 'sci', 'Sc22g0002050' => 'sci', 'Sc23g0001190' => 'sci', 'Sc24g0000980' => 'sci', 'Sed0006245' => 'sed', 'Sed0007543' => 'sed', 'Sed0009411' => 'sed', 'Sed0010765' => 'sed', 'Sed0012944' => 'sed', 'Sed0014682' => 'sed', 'Sed0016174' => 'sed', 'Sed0016796' => 'sed', 'Sed0020317' => 'sed', 'Sed0021467' => 'sed', 'SEGI_01316' => 'sgi', 'SEGI_03374' => 'sgi', 'SEGI_16265' => 'sgi', 'SEGI_18569' => 'sgi', 'SEGI_20351' => 'sgi', 'SEGI_26395' => 'sgi', 'SEGI_29469' => 'sgi', 'SEGI_34771' => 'sgi', 'SEGI_36769' => 'sgi', 'SEGI_37139' => 'sgi', 'SGA_v2.0_scaffold100G29687' => 'sas', 'SGA_v2.0_scaffold118G32472' => 'sas', 'SGA_v2.0_scaffold14G07051' => 'sas', 'SGA_v2.0_scaffold183G39845' => 'sas', 'SGA_v2.0_scaffold1G00174' => 'sas', 'SGA_v2.0_scaffold22G09714' => 'sas', 'SGA_v2.0_scaffold333G48992' => 'sas', 'SGA_v2.0_scaffold46G17491' => 'sas', 'SGA_v2.0_scaffold49G18294' => 'sas', 'SGA_v2.0_scaffold63G21658' => 'sas', 'SHI01741' => 'shi', 'SHI05771' => 'shi', 'SHI18077' => 'shi', 'SHI20525' => 'shi', 'SHI20527' => 'shi', 'SHI20528' => 'shi', 'SMO172G0185' => 'smo', 'SMO198G0020' => 'smo', 'SMO351G0006' => 'smo', 'SMO356G0118' => 'smo', 'SMO358G0296' => 'smo', 'SMO367G0079' => 'smo', 'SMO367G1277' => 'smo', 'Solyc01g014220.3' => 'sly', 'Solyc01g111770.2' => 'sly', 'Solyc02g078180.3' => 'sly', 'Solyc03g006430.3' => 'sly', 'Solyc03g006456.1' => 'sly', 'Solyc03g079860.2' => 'sly', 'Solyc04g079770.3' => 'sly', 'Solyc05g007430.4' => 'sly', 'Solyc07g063150.3' => 'sly', 'Solyc08g016620.3' => 'sly', 'Solyc09g057590.3' => 'sly', 'Solyc09g057600.1' => 'sly', 'Solyc10g009050.3' => 'sly', 'Solyc11g017420.2' => 'sly', 'Sopen01g053810' => 'spe', 'Sopen02g023040' => 'spe', 'Sopen03g002440' => 'spe', 'Sopen04g033350' => 'spe', 'Sopen05g003310' => 'spe', 'Sopen07g004050' => 'spe', 'Sopen07g031340' => 'spe', 'Sopen08g006990' => 'spe', 'Sopen10g004830' => 'spe', 'Sopen11g009370' => 'spe', 'Sp1g24450' => 'spa', 'Sp1g29670' => 'spa', 'Sp1g39600' => 'spa', 'Sp2g11080' => 'spa', 'Sp2g13970' => 'spa', 'Sp4g16130' => 'spa', 'Sp6g13080' => 'spa', 'Sp7g37270' => 'spa', 'TAR371G0065' => 'tar', 'TAR376G0340' => 'tar', 'TAR376G0435' => 'tar', 'TAR381G0002' => 'tar', 'TAR381G1236' => 'tar', 'TAR624G0055' => 'tar', 'TAR624G0324' => 'tar', 'TAR624G0696' => 'tar', 'TAR624G0906' => 'tar', 'TAR625G0107' => 'tar', 'TAR626G0015' => 'tar', 'TAR626G1356' => 'tar', 'TAR627G0888' => 'tar', 'TAR628G0399' => 'tar', 'TAR628G1327' => 'tar', 'TAR629G2831' => 'tar', 'TAR629G2874' => 'tar', 'TAR633G1432' => 'tar', 'TAR633G2771' => 'tar', 'THA.LOC104803394' => 'tha', 'THA.LOC104805153' => 'tha', 'THA.LOC104806784' => 'tha', 'THA.LOC104810473' => 'tha', 'THA.LOC104813100' => 'tha', 'THA.LOC104814215' => 'tha', 'THA.LOC104815554' => 'tha', 'THA.LOC104820544' => 'tha', 'THA.LOC104824754' => 'tha', 'THA.LOC104827717' => 'tha', 'Thecc.02G031400' => 'tca', 'Thecc.02G055900' => 'tca', 'Thecc.02G350800' => 'tca', 'Thecc.06G150900' => 'tca', 'Thecc.06G186600' => 'tca', 'Thecc.07G089600' => 'tca', 'Thecc.08G020400' => 'tca', 'Thecc.08G182100' => 'tca', 'Thhalv10000873m.g' => 'esa', 'Thhalv10004185m.g' => 'esa', 'Thhalv10006981m.g' => 'esa', 'Thhalv10007204m.g' => 'esa', 'Thhalv10011374m.g' => 'esa', 'Thhalv10013482m.g' => 'esa', 'Thhalv10017801m.g' => 'esa', 'Thhalv10024983m.g' => 'esa', 'TPR.G12072' => 'tpr', 'TPR.G15769' => 'tpr', 'TPR.G16504' => 'tpr', 'TPR.G16506' => 'tpr', 'TPR.G24345' => 'tpr', 'TPR.G26666' => 'tpr', 'TPR.G27320' => 'tpr', 'TPR.G31819' => 'tpr', 'TPR.G38879' => 'tpr', 'TPR.G39015' => 'tpr', 'TPR.G8819' => 'tpr', 'TWI09G0924' => 'twi', 'TWI12G0811' => 'twi', 'TWI12G1294' => 'twi', 'TWI31G0150' => 'twi', 'TWI36G1262' => 'twi', 'TWI38G1287' => 'twi', 'TWI38G1633' => 'twi', 'TWI38G1982' => 'twi', 'TWI39G0116' => 'twi', 'TWI60G1011' => 'twi', 'TWI63G0171' => 'twi', 'TWI73G0839' => 'twi', 'TWI79G1511' => 'twi', 'unitig_0.g915' => 'ugi', 'unitig_0.g916' => 'ugi', 'unitig_21.g20219' => 'ugi', 'unitig_21.g20416' => 'ugi', 'unitig_578.g16132' => 'ugi', 'unitig_578.g16718' => 'ugi', 'unitig_62.g23481' => 'ugi', 'unitig_744.g24535' => 'ugi', 'unitig_749.g13525' => 'ugi', 'vmacro01248' => 'vma', 'vmacro02290' => 'vma', 'vmacro10946' => 'vma', 'vmacro11865' => 'vma', 'vmacro12493' => 'vma', 'vmacro17322' => 'vma', 'vmacro21599' => 'vma', 'vmacro23041' => 'vma', 'VMungo0251G0004' => 'vmu', 'VMungo0251G2639' => 'vmu', 'VMungo0251G2967' => 'vmu', 'VMungo0540G0864' => 'vmu', 'VMungo0540G1569' => 'vmu', 'VMungo0647G0317' => 'vmu', 'VMungo0720G1373' => 'vmu', 'VMungo0720G1508' => 'vmu', 'VMungo1080G0485' => 'vmu', 'VMungo1215G3177' => 'vmu', 'Zm00001eb112600' => 'zma', 'Zm00001eb120220' => 'zma', 'Zm00001eb153240' => 'zma', 'Zm00001eb168880' => 'zma', 'Zm00001eb213920' => 'zma', 'Zm00001eb228280' => 'zma', 'Zm00001eb254580' => 'zma', 'Zm00001eb272180' => 'zma', 'Zm00001eb293190' => 'zma', 'Zm00001eb322930' => 'zma', 'Zm00001eb353360' => 'zma', 'Zm00001eb353390' => 'zma', 'Zm00001eb353430' => 'zma', 'Zm00001eb353440' => 'zma', 'Zm00001eb353780' => 'zma' ) $gf_id = 'HOM05D000499' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000499' ) $data_identifier = 'HOM05D000499' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 29, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 12, 'amhyb' => (int) 8, 'aly' => (int) 12, 'aox' => (int) 9, 'arhy' => (int) 26, 'ath' => (int) 8, 'atr' => (int) 7, 'acertr' => (int) 10, 'cqu' => (int) 15, 'bca' => (int) 29, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 11, 'cansat' => (int) 8, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 9, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 8, 'cpa' => (int) 10, 'csa' => (int) 7, 'camsi' => (int) 20, 'dca' => (int) 8, 'din' => (int) 12, 'dzi' => (int) 14, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 6, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 38, 'gra' => (int) 16, 'vvi' => (int) 8, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 5, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 11, 'lja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 11, 'mpo' => (int) 3, 'mbi' => (int) 14, 'mdo' => (int) 14, 'mtr' => (int) 8, 'cme' => (int) 9, 'egut' => (int) 9, 'ama' => (int) 11, 'nta' => (int) 17, 'nnu' => (int) 11, 'oeu' => (int) 18, 'osa' => (int) 8, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 6, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 9, 'rsi' => (int) 9, 'sbr' => (int) 10, 'sbo' => (int) 8, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 10, 'sas' => (int) 10, 'shi' => (int) 6, 'smo' => (int) 7, 'sly' => (int) 14, 'spe' => (int) 10, 'spa' => (int) 8, 'tar' => (int) 19, 'tha' => (int) 10, 'tca' => (int) 8, 'esa' => (int) 8, 'tpr' => (int) 11, 'twi' => (int) 13, 'ugi' => (int) 9, 'vma' => (int) 8, 'vmu' => (int) 10, 'zma' => (int) 15 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb353780' $species_info = array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ) $local_species = 'arhy' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000499', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1066', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p29780' => 'bna', 'A02p33180' => 'bna', 'A03p16470' => 'bna', 'A03p66010' => 'bna', 'A04p25970' => 'bna', 'A06p01270' => 'bna', 'A06p46080' => 'bna', 'A07p11400' => 'bna', 'A08p01840' => 'bna', 'A08p08230' => 'bna', 'A08p25740' => 'bna', 'A09p32070' => 'bna', 'A09p37830' => 'bna', 'A09p42840' => 'bna', 'A09p42850' => 'bna', 'Aa31LG10G2060' => 'aar', 'Aa31LG2G7410' => 'aar', 'Aa31LG6G10200' => 'aar', 'Aa31LG6G16680' => 'aar', 'Aa31LG6G8470' => 'aar', 'Aa31LG9G12730' => 'aar', 'Aa31LG9G13680' => 'aar', 'Aa31LG9G14920' => 'aar', 'Aa31LG9G6650' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4977' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5467' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3254' => 'aag', 'Actinidia02578' => 'ach', 'Actinidia07693' => 'ach', 'Actinidia08413' => 'ach', 'Actinidia08414' => 'ach', 'Actinidia15289' => 'ach', 'Actinidia19871' => 'ach', 'Actinidia21475' => 'ach', 'Actinidia22576' => 'ach', 'Actinidia28327' => 'ach', 'Actinidia32491' => 'ach', 'Actinidia39463' => 'ach', 'Actinidia39571' => 'ach', 'Ah.01g013750' => 'amhyb', 'Ah.01g023210' => 'amhyb', 'Ah.04g164850' => 'amhyb', 'Ah.05g178060' => 'amhyb', 'Ah.07g204270' => 'amhyb', 'Ah.07g208480' => 'amhyb', 'Ah.09g237410' => 'amhyb', 'Ah.14g089460' => 'amhyb', 'AL1G41790' => 'aly', 'AL1G49050' => 'aly', 'AL1G53810' => 'aly', 'AL1G61400' => 'aly', 'AL4G18580' => 'aly', 'AL5G12510' => 'aly', 'AL5G12540' => 'aly', 'AL6G43230' => 'aly', 'AL7G10370' => 'aly', 'AL7G19250' => 'aly', 'AL8G12240' => 'aly', 'AL8G18540' => 'aly', 'Aqoxy1G02409' => 'aox', 'Aqoxy2G03993' => 'aox', 'Aqoxy3G03357' => 'aox', 'Aqoxy4G00785' => 'aox', 'Aqoxy5G02598' => 'aox', 'Aqoxy6G00132' => 'aox', 'Aqoxy7G01776' => 'aox', 'Aqoxy7G02316' => 'aox', 'Aqoxy7G03973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.12AFKW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B8730' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27IQR1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3F75VG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3RE0GA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41TCQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.527VTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FIR39' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5W8UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DA38EV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ63HS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H1I32C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HC27T5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4M8AP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7N3CZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9UVDZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LS1NQA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT1D4B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SKC4TM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCFV76' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF9Q1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQWD9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1ZM88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WE07RT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YCK7VH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJE6Q6' => 'arhy', 'AT1G28240' => 'ath', 'AT1G34550' => 'ath', 'AT1G53040' => 'ath', 'AT2G02910' => 'ath', 'AT4G09630' => 'ath', 'AT4G38500' => 'ath', 'AT5G42660' => 'ath', 'AT5G46220' => 'ath', 'ATR0152G026' => 'atr', 'ATR0564G343' => 'atr', 'ATR0706G151' => 'atr', 'ATR0733G207' => 'atr', 'ATR0751G234' => 'atr', 'ATR0807G048' => 'atr', 'ATR1091G084' => 'atr', 'Atru.chr10.1229' => 'acertr', 'Atru.chr10.1230' => 'acertr', 'Atru.chr10.1874' => 'acertr', 'Atru.chr11.1808' => 'acertr', 'Atru.chr13.1795' => 'acertr', 'Atru.chr13.570' => 'acertr', 'Atru.chr2.2608' => 'acertr', 'Atru.chr2.2609' => 'acertr', 'Atru.chr5.3428' => 'acertr', 'Atru.chr8.1171' => 'acertr', 'AUR62004651' => 'cqu', 'AUR62008675' => 'cqu', 'AUR62010014' => 'cqu', 'AUR62013004' => 'cqu', 'AUR62014825' => 'cqu', 'AUR62015015' => 'cqu', 'AUR62015151' => 'cqu', 'AUR62017020' => 'cqu', 'AUR62019422' => 'cqu', 'AUR62023570' => 'cqu', 'AUR62025571' => 'cqu', 'AUR62029098' => 'cqu', 'AUR62033863' => 'cqu', 'AUR62034296' => 'cqu', 'AUR62040075' => 'cqu', 'BcaB02g07334' => 'bca', 'BcaB02g10575' => 'bca', 'BcaB03g12119' => 'bca', 'BcaB03g12120' => 'bca', 'BcaB03g13945' => 'bca', 'BcaB04g17123' => 'bca', 'BcaB04g17867' => 'bca', 'BcaB04g19839' => 'bca', 'BcaB07g30317' => 'bca', 'BcaB07g32432' => 'bca', 'BcaB07g33362' => 'bca', 'BcaB08g36611' => 'bca', 'BcaC01g00028' => 'bca', 'BcaC01g01356' => 'bca', 'BcaC01g02034' => 'bca', 'BcaC01g06051' => 'bca', 'BcaC03g16839' => 'bca', 'BcaC03g17176' => 'bca', 'BcaC05g26829' => 'bca', 'BcaC06g31490' => 'bca', 'BcaC06g35344' => 'bca', 'BcaC06g36570' => 'bca', 'BcaC07g37537' => 'bca', 'BcaC08g43491' => 'bca', 'BcaC08g43773' => 'bca', 'BcaNung00234' => 'bca', 'BcaNung01982' => 'bca', 'BcaNung03707' => 'bca', 'BcaNung06454' => 'bca', 'BolC2t10762H' => 'bol', 'BolC2t11191H' => 'bol', 'BolC3t14322H' => 'bol', 'BolC3t19747H' => 'bol', 'BolC3t21425H' => 'bol', 'BolC4t27800H' => 'bol', 'BolC5t31423H' => 'bol', 'BolC6t35951H' => 'bol', 'BolC6t36282H' => 'bol', 'BolC7t40678H' => 'bol', 'BolC7t40679H' => 'bol', 'BolC7t42222H' => 'bol', 'BolC7t43492H' => 'bol', 'BolC7t46785H' => 'bol', 'BolC8t47853H' => 'bol', 'BolC9t56805H' => 'bol', 'BraA02t08000Z' => 'bra', 'BraA02t08341Z' => 'bra', 'BraA03t10936Z' => 'bra', 'BraA03t15657Z' => 'bra', 'BraA04t18100Z' => 'bra', 'BraA05t20523Z' => 'bra', 'BraA06t23353Z' => 'bra', 'BraA06t27473Z' => 'bra', 'BraA06t27769Z' => 'bra', 'BraA07t28928Z' => 'bra', 'BraA08t32236Z' => 'bra', 'BraA08t32841Z' => 'bra', 'BraA08t34524Z' => 'bra', 'BraA09t38742Z' => 'bra', 'BraA09t39295Z' => 'bra', 'C02p47180' => 'bna', 'C02p50990' => 'bna', 'C03p19360' => 'bna', 'C03p74950' => 'bna', 'C03p91000' => 'bna', 'C04p63260' => 'bna', 'C05p27050' => 'bna', 'C06p08750' => 'bna', 'C06p11490' => 'bna', 'C07p02820' => 'bna', 'C07p17180' => 'bna', 'C07p29440' => 'bna', 'C07p63730' => 'bna', 'C09p39260' => 'bna', 'CAN.G1164.34' => 'can', 'CAN.G1164.39' => 'can', 'CAN.G1530.3' => 'can', 'CAN.G162.61' => 'can', 'CAN.G176.6' => 'can', 'CAN.G289.49' => 'can', 'CAN.G370.21' => 'can', 'CAN.G370.22' => 'can', 'CAN.G371.117' => 'can', 'CAN.G58.37' => 'can', 'CAN.G588.98' => 'can', 'CANSAT21G2266' => 'cansat', 'CANSAT25G2799' => 'cansat', 'CANSAT35G0862' => 'cansat', 'CANSAT35G1704' => 'cansat', 'CANSAT35G1760' => 'cansat', 'CANSAT56G3971' => 'cansat', 'CANSAT56G4116' => 'cansat', 'CANSAT80G1259' => 'cansat', 'CARHR027730' => 'chi', 'CARHR033880' => 'chi', 'CARHR043270' => 'chi', 'CARHR145330' => 'chi', 'CARHR145340' => 'chi', 'CARHR175570' => 'chi', 'CARHR181570' => 'chi', 'CARHR258470' => 'chi', 'CARHR260490' => 'chi', 'CARHR294220' => 'chi', 'Carub.0001s2668' => 'cru', 'Carub.0001s3257' => 'cru', 'Carub.0001s4220' => 'cru', 'Carub.0005s0179' => 'cru', 'Carub.0006s2807' => 'cru', 'Carub.0007s0039' => 'cru', 'Carub.0008s0169' => 'cru', 'Carub.0008s0636' => 'cru', 'Ca_00338_v3' => 'car', 'Ca_00542_v3' => 'car', 'Ca_01844_v3' => 'car', 'Ca_10611_v3' => 'car', 'Ca_13326_v3' => 'car', 'Ca_17944_v3' => 'car', 'Ca_18546_v3' => 'car', 'Ca_24219_v3' => 'car', 'Ca_29972_v3' => 'car', 'CBR_g3681' => 'cbr', 'CBR_g40021' => 'cbr', 'Cc01_g08140' => 'ccan', 'Cc02_g13410' => 'ccan', 'Cc02_g37480' => 'ccan', 'Cc05_g12030' => 'ccan', 'Cc09_g03370' => 'ccan', 'Cc09_g10300' => 'ccan', 'Cc10_g03530' => 'ccan', 'Cc10_g11380' => 'ccan', 'CDE01G0176' => 'cde', 'CDE02G0675' => 'cde', 'CDE02G0942' => 'cde', 'CDE02G1153' => 'cde', 'CDE02G4177' => 'cde', 'CDE04G2117' => 'cde', 'CDE04G2736' => 'cde', 'CDE08G1161' => 'cde', 'CDE09G1238' => 'cde', 'Cfa000467' => 'cfa', 'Cfa000947' => 'cfa', 'Cfa004969' => 'cfa', 'Cfa005284' => 'cfa', 'Cfa008993' => 'cfa', 'Cfa018187' => 'cfa', 'Cfa018454' => 'cfa', 'Cfa020585' => 'cfa', 'Ciclev10000424m.g' => 'ccl', 'Ciclev10003605m.g' => 'ccl', 'Ciclev10007828m.g' => 'ccl', 'Ciclev10014620m.g' => 'ccl', 'Ciclev10015169m.g' => 'ccl', 'Ciclev10018291m.g' => 'ccl', 'Ciclev10028256m.g' => 'ccl', 'Ciclev10033822m.g' => 'ccl', 'CiPaw.05G060300' => 'cil', 'CiPaw.05G085000' => 'cil', 'CiPaw.06G083700' => 'cil', 'CiPaw.06G120300' => 'cil', 'CiPaw.09G060500' => 'cil', 'CiPaw.09G123800' => 'cil', 'CiPaw.11G169700' => 'cil', 'CiPaw.12G118300' => 'cil', 'CiPaw.15G071000' => 'cil', 'CiPaw.15G081900' => 'cil', 'ClCG01G024610' => 'cla', 'ClCG03G006070' => 'cla', 'ClCG05G019250' => 'cla', 'ClCG09G009500' => 'cla', 'ClCG11G008200' => 'cla', 'ClCG11G018080' => 'cla', 'COL.COLO4_17373' => 'col', 'COL.COLO4_22994' => 'col', 'COL.COLO4_26389' => 'col', 'COL.COLO4_27170' => 'col', 'COL.COLO4_31074' => 'col', 'COL.COLO4_31465' => 'col', 'COL.COLO4_36438' => 'col', 'COL.COLO4_36439' => 'col', 'Cpa.g.c38781' => 'cpa', 'Cpa.g.sc128.12' => 'cpa', 'Cpa.g.sc166.7' => 'cpa', 'Cpa.g.sc166.8' => 'cpa', 'Cpa.g.sc20.111' => 'cpa', 'Cpa.g.sc27.31' => 'cpa', 'Cpa.g.sc64.36' => 'cpa', 'Cpa.g.sc64.37' => 'cpa', 'Cpa.g.sc66.49' => 'cpa', 'Cpa.g.sc80.64' => 'cpa', 'CsaV3_1G012320' => 'csa', 'CsaV3_2G008480' => 'csa', 'CsaV3_2G033450' => 'csa', 'CsaV3_3G044830' => 'csa', 'CsaV3_4G033710' => 'csa', 'CsaV3_6G051730' => 'csa', 'CsaV3_7G025350' => 'csa', 'CSS0001067' => 'camsi', 'CSS0005996' => 'camsi', 'CSS0006590' => 'camsi', 'CSS0009673' => 'camsi', 'CSS0010201' => 'camsi', 'CSS0010549' => 'camsi', 'CSS0011364' => 'camsi', 'CSS0014473' => 'camsi', 'CSS0014961' => 'camsi', 'CSS0020191' => 'camsi', 'CSS0021165' => 'camsi', 'CSS0022306' => 'camsi', 'CSS0030591' => 'camsi', 'CSS0030696' => 'camsi', 'CSS0032653' => 'camsi', 'CSS0037487' => 'camsi', 'CSS0041102' => 'camsi', 'CSS0041261' => 'camsi', 'CSS0046246' => 'camsi', 'CSS0049256' => 'camsi', 'DCAR_004075' => 'dca', 'DCAR_011538' => 'dca', 'DCAR_019553' => 'dca', 'DCAR_020952' => 'dca', 'DCAR_021739' => 'dca', 'DCAR_027407' => 'dca', 'DCAR_027913' => 'dca', 'DCAR_028066' => 'dca', 'Dinv05899' => 'din', 'Dinv07563' => 'din', 'Dinv08010' => 'din', 'Dinv14125' => 'din', 'Dinv20172' => 'din', 'Dinv30743' => 'din', 'Dinv31229' => 'din', 'Dinv34162' => 'din', 'Dinv36028' => 'din', 'Dinv39368' => 'din', 'Dinv40565' => 'din', 'Dinv41706' => 'din', 'Duzib052G0089' => 'dzi', 'Duzib116G0641' => 'dzi', 'Duzib132G0069' => 'dzi', 'Duzib132G1219' => 'dzi', 'Duzib147G0278' => 'dzi', 'Duzib160G0480' => 'dzi', 'Duzib170G0661' => 'dzi', 'Duzib177G0591' => 'dzi', 'Duzib187G1353' => 'dzi', 'Duzib192G0858' => 'dzi', 'Duzib192G0883' => 'dzi', 'Duzib213G0506' => 'dzi', 'Duzib235G0289' => 'dzi', 'Duzib251G0422' => 'dzi', 'ECA232G3898' => 'eca', 'ECA233G5950' => 'eca', 'ECA234G1699' => 'eca', 'ECA234G2421' => 'eca', 'ECA236G0426' => 'eca', 'ECA236G4331' => 'eca', 'ECA248G2573' => 'eca', 'EL10Ac1g00077' => 'bvu', 'EL10Ac1g01746' => 'bvu', 'EL10Ac2g03464' => 'bvu', 'EL10Ac4g08176' => 'bvu', 'EL10Ac7g17521' => 'bvu', 'EL10Ac8g20386' => 'bvu', 'EL10Ac9g21343' => 'bvu', 'EL10Ac9g22688' => 'bvu', 'Eucgr.B03434' => 'egr', 'Eucgr.D00618' => 'egr', 'Eucgr.E02395' => 'egr', 'Eucgr.F01129' => 'egr', 'Eucgr.F02622' => 'egr', 'Eucgr.F04207' => 'egr', 'FAN01G0570' => 'fan', 'FAN03G3351' => 'fan', 'FAN06G3702' => 'fan', 'FAN07G2149' => 'fan', 'FAN10G3758' => 'fan', 'FAN11G1170' => 'fan', 'FAN11G2050' => 'fan', 'FAN11G2724' => 'fan', 'FAN12G1700' => 'fan', 'FAN12G2028' => 'fan', 'FAN15G1160' => 'fan', 'FAN15G3063' => 'fan', 'FAN16G2540' => 'fan', 'FAN16G3077' => 'fan', 'FAN16G3624' => 'fan', 'FAN17G0221' => 'fan', 'FAN20G2492' => 'fan', 'FAN20G2905' => 'fan', 'FAN21G0548' => 'fan', 'FAN21G1300' => 'fan', 'FAN22G0077' => 'fan', 'FAN22G1315' => 'fan', 'FAN24G1280' => 'fan', 'FAN24G1445' => 'fan', 'FAN24G3527' => 'fan', 'FAN25G0464' => 'fan', 'FAN25G2885' => 'fan', 'FAN25G3270' => 'fan', 'FAN27G1101' => 'fan', 'FAN27G2846' => 'fan', 'FAN27G3524' => 'fan', 'FvH4_2g11770' => 'fve', 'FvH4_2g15630' => 'fve', 'FvH4_3g05570' => 'fve', 'FvH4_3g09110' => 'fve', 'FvH4_3g19940' => 'fve', 'FvH4_4g04821' => 'fve', 'FvH4_4g31480' => 'fve', 'FvH4_7g01740' => 'fve', 'Glyma.05G130400' => 'gma', 'Glyma.05G156400' => 'gma', 'Glyma.07G197000' => 'gma', 'Glyma.08G085151' => 'gma', 'Glyma.08G114500' => 'gma', 'Glyma.08G300400' => 'gma', 'Glyma.10G215800' => 'gma', 'Glyma.12G224400' => 'gma', 'Glyma.13G179300' => 'gma', 'Glyma.13G218151' => 'gma', 'Glyma.13G238800' => 'gma', 'Glyma.13G276900' => 'gma', 'Glyma.14G078200' => 'gma', 'Glyma.15G074500' => 'gma', 'Glyma.15G094100' => 'gma', 'Glyma.17G247200' => 'gma', 'Glyma.18G120100' => 'gma', 'Glyma.20G176000' => 'gma', 'Gohir.A01G063600' => 'ghi', 'Gohir.A01G170301' => 'ghi', 'Gohir.A02G060500' => 'ghi', 'Gohir.A05G133850' => 'ghi', 'Gohir.A05G161400' => 'ghi', 'Gohir.A06G012900' => 'ghi', 'Gohir.A06G035901' => 'ghi', 'Gohir.A06G127100' => 'ghi', 'Gohir.A06G210500' => 'ghi', 'Gohir.A08G008650' => 'ghi', 'Gohir.A09G072700' => 'ghi', 'Gohir.A09G088301' => 'ghi', 'Gohir.A10G040600' => 'ghi', 'Gohir.A12G036300' => 'ghi', 'Gohir.A12G143350' => 'ghi', 'Gohir.A12G165500' => 'ghi', 'Gohir.A13G145700' => 'ghi', 'Gohir.D01G050000' => 'ghi', 'Gohir.D01G051366' => 'ghi', 'Gohir.D01G161350' => 'ghi', 'Gohir.D02G065900' => 'ghi', 'Gohir.D05G164200' => 'ghi', 'Gohir.D05G355500' => 'ghi', 'Gohir.D06G010400' => 'ghi', 'Gohir.D06G111250' => 'ghi', 'Gohir.D06G132000' => 'ghi', 'Gohir.D06G210500' => 'ghi', 'Gohir.D07G165675' => 'ghi', 'Gohir.D08G062240' => 'ghi', 'Gohir.D08G086101' => 'ghi', 'Gohir.D08G138060' => 'ghi', 'Gohir.D09G072300' => 'ghi', 'Gohir.D10G041400' => 'ghi', 'Gohir.D11G191020' => 'ghi', 'Gohir.D11G212066' => 'ghi', 'Gohir.D12G036300' => 'ghi', 'Gohir.D12G168600' => 'ghi', 'Gohir.D13G150600' => 'ghi', 'Gorai.001G057300' => 'gra', 'Gorai.002G069900' => 'gra', 'Gorai.002G200000' => 'gra', 'Gorai.003G067600' => 'gra', 'Gorai.005G074800' => 'gra', 'Gorai.006G087300' => 'gra', 'Gorai.008G037500' => 'gra', 'Gorai.008G181400' => 'gra', 'Gorai.009G169400' => 'gra', 'Gorai.009G387900' => 'gra', 'Gorai.010G013300' => 'gra', 'Gorai.010G153800' => 'gra', 'Gorai.010G255800' => 'gra', 'Gorai.011G043700' => 'gra', 'Gorai.011G198900' => 'gra', 'Gorai.013G168400' => 'gra', 'GSVIVG01005212001' => 'vvi', 'GSVIVG01006163001' => 'vvi', 'GSVIVG01009625001' => 'vvi', 'GSVIVG01014338001' => 'vvi', 'GSVIVG01020005001' => 'vvi', 'GSVIVG01021450001' => 'vvi', 'GSVIVG01023975001' => 'vvi', 'GSVIVG01034490001' => 'vvi', 'HanXRQChr04g0112071' => 'han', 'HanXRQChr05g0131151' => 'han', 'HanXRQChr09g0262371' => 'han', 'HanXRQChr09g0268401' => 'han', 'HanXRQChr10g0279241' => 'han', 'HanXRQChr10g0297961' => 'han', 'HanXRQChr11g0326231' => 'han', 'HanXRQChr11g0328471' => 'han', 'HanXRQChr16g0507941' => 'han', 'HanXRQChr17g0560211' => 'han', 'Haze_02108' => 'cav', 'Haze_02428' => 'cav', 'Haze_05593' => 'cav', 'Haze_06448' => 'cav', 'Haze_09427' => 'cav', 'Haze_12022' => 'cav', 'Haze_17612' => 'cav', 'Haze_17928' => 'cav', 'Hma1.2p1_0032F.1_g019250' => 'hma', 'Hma1.2p1_0163F.1_g072690' => 'hma', 'Hma1.2p1_0265F.1_g106710' => 'hma', 'Hma1.2p1_0286F.1_g113970' => 'hma', 'Hma1.2p1_0363F.1_g136640' => 'hma', 'Hma1.2p1_0584F.1_g183470' => 'hma', 'Hma1.2p1_0885F.1_g232570' => 'hma', 'HPP92_006022' => 'vpl', 'HPP92_007320' => 'vpl', 'HPP92_011521' => 'vpl', 'HPP92_019387' => 'vpl', 'HPP92_024038' => 'vpl', 'Hund05891' => 'sun', 'Hund06450' => 'sun', 'Hund12053' => 'sun', 'Hund16800' => 'sun', 'Hund21222' => 'sun', 'Hund22896' => 'sun', 'Hund23746' => 'sun', 'Hund27083' => 'sun', 'Lalb_Chr02g0141831' => 'lal', 'Lalb_Chr02g0141841' => 'lal', 'Lalb_Chr05g0220411' => 'lal', 'Lalb_Chr06g0162081' => 'lal', 'Lalb_Chr09g0327651' => 'lal', 'Lalb_Chr13g0295051' => 'lal', 'Lalb_Chr15g0086801' => 'lal', 'Lalb_Chr16g0383781' => 'lal', 'Lalb_Chr16g0383791' => 'lal', 'Lalb_Chr18g0055441' => 'lal', 'Lalb_Chr18g0059611' => 'lal', 'Lalb_Chr20g0109661' => 'lal', 'Lalb_Chr20g0109831' => 'lal', 'Lalb_Chr20g0121871' => 'lal', 'Lalb_Chr22g0355361' => 'lal', 'Lalb_Chr25g0286371' => 'lal', 'Lj1A1187G43' => 'lonja', 'Lj1A1205T50' => 'lonja', 'Lj1A800G33' => 'lonja', 'Lj1C1187T7' => 'lonja', 'Lj1C843T11' => 'lonja', 'Lj1g0010940' => 'lja', 'Lj2A288T69' => 'lonja', 'Lj3g0024276' => 'lja', 'Lj4A47T76' => 'lonja', 'Lj4g0005805' => 'lja', 'Lj4g0006097' => 'lja', 'Lj4g0008528' => 'lja', 'Lj4g0024907' => 'lja', 'Lj5g0012472' => 'lja', 'Lj5g0018648' => 'lja', 'Lj6C789G1' => 'lonja', 'Lj6g0004000' => 'lja', 'Lj7A292G67' => 'lonja', 'Lj7A292T64' => 'lonja', 'Lj9A400T58' => 'lonja', 'Lsat_1_v5_gn_1_126181' => 'lsa', 'Lsat_1_v5_gn_4_123041' => 'lsa', 'Lsat_1_v5_gn_4_133620' => 'lsa', 'Lsat_1_v5_gn_4_53221' => 'lsa', 'Lsat_1_v5_gn_4_71961' => 'lsa', 'Lsat_1_v5_gn_7_105241' => 'lsa', 'Lsat_1_v5_gn_7_21361' => 'lsa', 'Lsat_1_v5_gn_7_28860' => 'lsa', 'Lsat_1_v5_gn_7_31260' => 'lsa', 'Lsat_1_v5_gn_8_52801' => 'lsa', 'Manes.02G191400' => 'mes', 'Manes.03G110100' => 'mes', 'Manes.04G071100' => 'mes', 'Manes.05G100500' => 'mes', 'Manes.05G164700' => 'mes', 'Manes.15G087000' => 'mes', 'Manes.15G121500' => 'mes', 'Manes.16G028300' => 'mes', 'Manes.17G046100' => 'mes', 'Manes.17G069800' => 'mes', 'Manes.18G100500' => 'mes', 'Mapoly0002s0109' => 'mpo', 'Mapoly0024s0007' => 'mpo', 'Mapoly0089s0032' => 'mpo', 'MBI04_g42241_MAGBIO' => 'mbi', 'MBI05_g11988_MAGBIO' => 'mbi', 'MBI05_g35452_MAGBIO' => 'mbi', 'MBI07_g30179_MAGBIO' => 'mbi', 'MBI07_g35859_MAGBIO' => 'mbi', 'MBI07_g35860_MAGBIO' => 'mbi', 'MBI07_g37166_MAGBIO' => 'mbi', 'MBI08_g18172_MAGBIO' => 'mbi', 'MBI09_g08441_MAGBIO' => 'mbi', 'MBI13_g01676_MAGBIO' => 'mbi', 'MBI14_g42955_MAGBIO' => 'mbi', 'MBI16_g13161_MAGBIO' => 'mbi', 'MBI17_g27204_MAGBIO' => 'mbi', 'MBI19_g21595_MAGBIO' => 'mbi', 'MD00G1148400' => 'mdo', 'MD02G1301200' => 'mdo', 'MD03G1227800' => 'mdo', 'MD05G1041100' => 'mdo', 'MD05G1124800' => 'mdo', 'MD05G1284000' => 'mdo', 'MD05G1338800' => 'mdo', 'MD05G1338900' => 'mdo', 'MD07G1022800' => 'mdo', 'MD10G1047500' => 'mdo', 'MD10G1127500' => 'mdo', 'MD10G1262300' => 'mdo', 'MD10G1293800' => 'mdo', 'MD16G1074300' => 'mdo', 'Medtr1g021670' => 'mtr', 'Medtr1g096320' => 'mtr', 'Medtr2g013690' => 'mtr', 'Medtr2g019450' => 'mtr', 'Medtr2g085170' => 'mtr', 'Medtr4g088785' => 'mtr', 'Medtr8g055930' => 'mtr', 'Medtr8g085850' => 'mtr', 'MELO3C002605.2' => 'cme', 'MELO3C003891.2' => 'cme', 'MELO3C004012.2' => 'cme', 'MELO3C007134.2' => 'cme', 'MELO3C008118.2' => 'cme', 'MELO3C016700.2' => 'cme', 'MELO3C024127.2' => 'cme', 'MELO3C033361.2' => 'cme', 'MELO3C033362.2' => 'cme', 'Migut.C00430' => 'egut', 'Migut.C01246' => 'egut', 'Migut.E00101' => 'egut', 'Migut.H01486' => 'egut', 'Migut.H01939' => 'egut', 'Migut.K00360' => 'egut', 'Migut.M00910' => 'egut', 'Migut.M01139' => 'egut', 'Migut.N02677' => 'egut', 'MSTRG.13252' => 'ama', 'MSTRG.14701' => 'ama', 'MSTRG.1521' => 'ama', 'MSTRG.15884' => 'ama', 'MSTRG.16242' => 'ama', 'MSTRG.22285' => 'ama', 'MSTRG.22444' => 'ama', 'MSTRG.2349' => 'ama', 'MSTRG.26308' => 'ama', 'MSTRG.28296' => 'ama', 'MSTRG.9895' => 'ama', 'Nitab4.5_0000110g0060' => 'nta', 'Nitab4.5_0000420g0130' => 'nta', 'Nitab4.5_0000422g0030' => 'nta', 'Nitab4.5_0000560g0180' => 'nta', 'Nitab4.5_0000703g0100' => 'nta', 'Nitab4.5_0000786g0200' => 'nta', 'Nitab4.5_0001336g0020' => 'nta', 'Nitab4.5_0001796g0030' => 'nta', 'Nitab4.5_0003348g0060' => 'nta', 'Nitab4.5_0003698g0040' => 'nta', 'Nitab4.5_0003942g0090' => 'nta', 'Nitab4.5_0004775g0070' => 'nta', 'Nitab4.5_0004864g0030' => 'nta', 'Nitab4.5_0005615g0020' => 'nta', 'Nitab4.5_0009288g0030' => 'nta', 'Nitab4.5_0009341g0010' => 'nta', 'Nitab4.5_0009535g0010' => 'nta', 'Nn1g03995' => 'nnu', 'Nn1g04100' => 'nnu', 'Nn1g06530' => 'nnu', 'Nn3g16404' => 'nnu', 'Nn3g17212' => 'nnu', 'Nn3g20776' => 'nnu', 'Nn3g21923' => 'nnu', 'Nn5g27737' => 'nnu', 'Nn5g29461' => 'nnu', 'Nn7g38355' => 'nnu', 'Nn8g39873' => 'nnu', 'Oeu000548.2' => 'oeu', 'Oeu004672.1' => 'oeu', 'Oeu015605.2' => 'oeu', 'Oeu016092.1' => 'oeu', 'Oeu017879.3' => 'oeu', 'Oeu024910.1' => 'oeu', 'Oeu028965.1' => 'oeu', 'Oeu031269.1' => 'oeu', 'Oeu031270.1' => 'oeu', 'Oeu032535.1' => 'oeu', 'Oeu034151.1' => 'oeu', 'Oeu034152.1' => 'oeu', 'Oeu034588.2' => 'oeu', 'Oeu050846.1' => 'oeu', 'Oeu050849.2' => 'oeu', 'Oeu051063.2' => 'oeu', 'Oeu052368.1' => 'oeu', 'Oeu052370.1' => 'oeu', 'Os01g0210400' => 'osa', 'Os01g0304300' => 'osa', 'Os01g0749100' => 'osa', 'Os02g0745800' => 'osa', 'Os03g0769050' => 'osa', 'Os05g0531500' => 'osa', 'Os06g0724300' => 'osa', 'Os11g0198100' => 'osa', 'Peaxi162Scf00069g01425' => 'pax', 'Peaxi162Scf00280g00811' => 'pax', 'Peaxi162Scf00310g00615' => 'pax', 'Peaxi162Scf00362g00542' => 'pax', 'Peaxi162Scf00461g00310' => 'pax', 'Peaxi162Scf00530g00118' => 'pax', 'Peaxi162Scf00541g00057' => 'pax', 'Peaxi162Scf00661g00017' => 'pax', 'Peaxi162Scf00926g00027' => 'pax', 'Peaxi162Scf01064g00263' => 'pax', 'Peaxi162Scf01211g00135' => 'pax', 'PGR004G2336' => 'pgr', 'PGR042G0327' => 'pgr', 'PGR042G1957' => 'pgr', 'PGR042G2003' => 'pgr', 'PGR042G3929' => 'pgr', 'PGR083G1137' => 'pgr', 'PGR083G1364' => 'pgr', 'PGSC0003DMG400003381' => 'stu', 'PGSC0003DMG400003417' => 'stu', 'PGSC0003DMG400008981' => 'stu', 'PGSC0003DMG400012417' => 'stu', 'PGSC0003DMG400012823' => 'stu', 'PGSC0003DMG400016885' => 'stu', 'PGSC0003DMG400022812' => 'stu', 'PGSC0003DMG400029726' => 'stu', 'PGSC0003DMG401009243' => 'stu', 'PGSC0003DMG401031505' => 'stu', 'PGSC0003DMG402031505' => 'stu', 'Phvul.001G017600' => 'pvu', 'Phvul.002G193500' => 'pvu', 'Phvul.002G228900' => 'pvu', 'Phvul.002G236800' => 'pvu', 'Phvul.003G049500' => 'pvu', 'Phvul.005G072000' => 'pvu', 'Phvul.006G164800' => 'pvu', 'Phvul.006G185100' => 'pvu', 'Phvul.007G090000' => 'pvu', 'Potri.001G399800' => 'ptr', 'Potri.002G149900' => 'ptr', 'Potri.004G044100' => 'ptr', 'Potri.004G177600' => 'ptr', 'Potri.009G138000' => 'ptr', 'Potri.010G094000' => 'ptr', 'Potri.011G053000' => 'ptr', 'Potri.011G119300' => 'ptr', 'Potri.013G113700' => 'ptr', 'Potri.018G107800' => 'ptr', 'Potri.019G084100' => 'ptr', 'Pp3c14_23720' => 'ppa', 'Pp3c16_6340' => 'ppa', 'Pp3c23_13420' => 'ppa', 'Pp3c24_2740' => 'ppa', 'Pp3c25_860' => 'ppa', 'Pp3c8_21750' => 'ppa', 'Prupe.1G273000' => 'ppe', 'Prupe.1G273700' => 'ppe', 'Prupe.1G274100' => 'ppe', 'Prupe.2G023300' => 'ppe', 'Prupe.4G048000' => 'ppe', 'Prupe.4G080400' => 'ppe', 'Prupe.4G181200' => 'ppe', 'Prupe.8G056900' => 'ppe', 'Prupe.8G168700' => 'ppe', 'Psat1g189080' => 'psa', 'Psat1g204760' => 'psa', 'Psat4g175560' => 'psa', 'Psat4g177720' => 'psa', 'Psat5g244240' => 'psa', 'Psat6g010720' => 'psa', 'Psat6g187200' => 'psa', 'Psat7g072040' => 'psa', 'PSO017G3501' => 'pso', 'PSO063G2148' => 'pso', 'PSO063G5608' => 'pso', 'PSO210G6392' => 'pso', 'PSO541G2319' => 'pso', 'PSO541G2836' => 'pso', 'PSO541G4012' => 'pso', 'PSO541G6253' => 'pso', 'PSO675G0580' => 'pso', 'PSO675G0856' => 'pso', 'PSO675G5635' => 'pso', 'PSO675G9157' => 'pso', 'PSO832G1660' => 'pso', 'PSO832G1969' => 'pso', 'QL02p007186' => 'qlo', 'QL02p033904' => 'qlo', 'QL03p064391' => 'qlo', 'QL05p040593' => 'qlo', 'QL05p058242' => 'qlo', 'QL08p021825' => 'qlo', 'QL11p004981' => 'qlo', 'RcHm_v2.0_Chr1g0318301' => 'rch', 'RcHm_v2.0_Chr4g0418501' => 'rch', 'RcHm_v2.0_Chr4g0439971' => 'rch', 'RcHm_v2.0_Chr5g0008541' => 'rch', 'RcHm_v2.0_Chr5g0014101' => 'rch', 'RcHm_v2.0_Chr5g0014131' => 'rch', 'RcHm_v2.0_Chr5g0033621' => 'rch', 'RcHm_v2.0_Chr6g0272041' => 'rch', 'RcHm_v2.0_Chr6g0278831' => 'rch', 'Rhsim02G0130400' => 'rsi', 'Rhsim02G0171100' => 'rsi', 'Rhsim05G0053000' => 'rsi', 'Rhsim05G0053100' => 'rsi', 'Rhsim06G0096500' => 'rsi', 'Rhsim06G0096600' => 'rsi', 'Rhsim06G0199100' => 'rsi', 'Rhsim12G0062300' => 'rsi', 'Rhsim12G0062800' => 'rsi', 'Sabra02G0118600' => 'sbr', 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'Solyc03g079860.2' => 'sly', 'Solyc04g079770.3' => 'sly', 'Solyc05g007430.4' => 'sly', 'Solyc07g063150.3' => 'sly', 'Solyc08g016620.3' => 'sly', 'Solyc09g057590.3' => 'sly', 'Solyc09g057600.1' => 'sly', 'Solyc10g009050.3' => 'sly', 'Solyc11g017420.2' => 'sly', 'Sopen01g053810' => 'spe', 'Sopen02g023040' => 'spe', 'Sopen03g002440' => 'spe', 'Sopen04g033350' => 'spe', 'Sopen05g003310' => 'spe', 'Sopen07g004050' => 'spe', 'Sopen07g031340' => 'spe', 'Sopen08g006990' => 'spe', 'Sopen10g004830' => 'spe', 'Sopen11g009370' => 'spe', 'Sp1g24450' => 'spa', 'Sp1g29670' => 'spa', 'Sp1g39600' => 'spa', 'Sp2g11080' => 'spa', 'Sp2g13970' => 'spa', 'Sp4g16130' => 'spa', 'Sp6g13080' => 'spa', 'Sp7g37270' => 'spa', 'TAR371G0065' => 'tar', 'TAR376G0340' => 'tar', 'TAR376G0435' => 'tar', 'TAR381G0002' => 'tar', 'TAR381G1236' => 'tar', 'TAR624G0055' => 'tar', 'TAR624G0324' => 'tar', 'TAR624G0696' => 'tar', 'TAR624G0906' => 'tar', 'TAR625G0107' => 'tar', 'TAR626G0015' => 'tar', 'TAR626G1356' => 'tar', 'TAR627G0888' => 'tar', 'TAR628G0399' => 'tar', 'TAR628G1327' => 'tar', 'TAR629G2831' => 'tar', 'TAR629G2874' => 'tar', 'TAR633G1432' => 'tar', 'TAR633G2771' => 'tar', 'THA.LOC104803394' => 'tha', 'THA.LOC104805153' => 'tha', 'THA.LOC104806784' => 'tha', 'THA.LOC104810473' => 'tha', 'THA.LOC104813100' => 'tha', 'THA.LOC104814215' => 'tha', 'THA.LOC104815554' => 'tha', 'THA.LOC104820544' => 'tha', 'THA.LOC104824754' => 'tha', 'THA.LOC104827717' => 'tha', 'Thecc.02G031400' => 'tca', 'Thecc.02G055900' => 'tca', 'Thecc.02G350800' => 'tca', 'Thecc.06G150900' => 'tca', 'Thecc.06G186600' => 'tca', 'Thecc.07G089600' => 'tca', 'Thecc.08G020400' => 'tca', 'Thecc.08G182100' => 'tca', 'Thhalv10000873m.g' => 'esa', 'Thhalv10004185m.g' => 'esa', 'Thhalv10006981m.g' => 'esa', 'Thhalv10007204m.g' => 'esa', 'Thhalv10011374m.g' => 'esa', 'Thhalv10013482m.g' => 'esa', 'Thhalv10017801m.g' => 'esa', 'Thhalv10024983m.g' => 'esa', 'TPR.G12072' => 'tpr', 'TPR.G15769' => 'tpr', 'TPR.G16504' => 'tpr', 'TPR.G16506' => 'tpr', 'TPR.G24345' => 'tpr', 'TPR.G26666' => 'tpr', 'TPR.G27320' => 'tpr', 'TPR.G31819' => 'tpr', 'TPR.G38879' => 'tpr', 'TPR.G39015' => 'tpr', 'TPR.G8819' => 'tpr', 'TWI09G0924' => 'twi', 'TWI12G0811' => 'twi', 'TWI12G1294' => 'twi', 'TWI31G0150' => 'twi', 'TWI36G1262' => 'twi', 'TWI38G1287' => 'twi', 'TWI38G1633' => 'twi', 'TWI38G1982' => 'twi', 'TWI39G0116' => 'twi', 'TWI60G1011' => 'twi', 'TWI63G0171' => 'twi', 'TWI73G0839' => 'twi', 'TWI79G1511' => 'twi', 'unitig_0.g915' => 'ugi', 'unitig_0.g916' => 'ugi', 'unitig_21.g20219' => 'ugi', 'unitig_21.g20416' => 'ugi', 'unitig_578.g16132' => 'ugi', 'unitig_578.g16718' => 'ugi', 'unitig_62.g23481' => 'ugi', 'unitig_744.g24535' => 'ugi', 'unitig_749.g13525' => 'ugi', 'vmacro01248' => 'vma', 'vmacro02290' => 'vma', 'vmacro10946' => 'vma', 'vmacro11865' => 'vma', 'vmacro12493' => 'vma', 'vmacro17322' => 'vma', 'vmacro21599' => 'vma', 'vmacro23041' => 'vma', 'VMungo0251G0004' => 'vmu', 'VMungo0251G2639' => 'vmu', 'VMungo0251G2967' => 'vmu', 'VMungo0540G0864' => 'vmu', 'VMungo0540G1569' => 'vmu', 'VMungo0647G0317' => 'vmu', 'VMungo0720G1373' => 'vmu', 'VMungo0720G1508' => 'vmu', 'VMungo1080G0485' => 'vmu', 'VMungo1215G3177' => 'vmu', 'Zm00001eb112600' => 'zma', 'Zm00001eb120220' => 'zma', 'Zm00001eb153240' => 'zma', 'Zm00001eb168880' => 'zma', 'Zm00001eb213920' => 'zma', 'Zm00001eb228280' => 'zma', 'Zm00001eb254580' => 'zma', 'Zm00001eb272180' => 'zma', 'Zm00001eb293190' => 'zma', 'Zm00001eb322930' => 'zma', 'Zm00001eb353360' => 'zma', 'Zm00001eb353390' => 'zma', 'Zm00001eb353430' => 'zma', 'Zm00001eb353440' => 'zma', 'Zm00001eb353780' => 'zma' ), 'gf_id' => 'HOM05D000499', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000499' ), 'data_identifier' => 'HOM05D000499', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000499', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1066', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p29780' => 'bna', 'A02p33180' => 'bna', 'A03p16470' => 'bna', 'A03p66010' => 'bna', 'A04p25970' => 'bna', 'A06p01270' => 'bna', 'A06p46080' => 'bna', 'A07p11400' => 'bna', 'A08p01840' => 'bna', 'A08p08230' => 'bna', 'A08p25740' => 'bna', 'A09p32070' => 'bna', 'A09p37830' => 'bna', 'A09p42840' => 'bna', 'A09p42850' => 'bna', 'Aa31LG10G2060' => 'aar', 'Aa31LG2G7410' => 'aar', 'Aa31LG6G10200' => 'aar', 'Aa31LG6G16680' => 'aar', 'Aa31LG6G8470' => 'aar', 'Aa31LG9G12730' => 'aar', 'Aa31LG9G13680' => 'aar', 'Aa31LG9G14920' => 'aar', 'Aa31LG9G6650' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4977' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5467' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3254' => 'aag', 'Actinidia02578' => 'ach', 'Actinidia07693' => 'ach', 'Actinidia08413' => 'ach', 'Actinidia08414' => 'ach', 'Actinidia15289' => 'ach', 'Actinidia19871' => 'ach', 'Actinidia21475' => 'ach', 'Actinidia22576' => 'ach', 'Actinidia28327' => 'ach', 'Actinidia32491' => 'ach', 'Actinidia39463' => 'ach', 'Actinidia39571' => 'ach', 'Ah.01g013750' => 'amhyb', 'Ah.01g023210' => 'amhyb', 'Ah.04g164850' => 'amhyb', 'Ah.05g178060' => 'amhyb', 'Ah.07g204270' => 'amhyb', 'Ah.07g208480' => 'amhyb', 'Ah.09g237410' => 'amhyb', 'Ah.14g089460' => 'amhyb', 'AL1G41790' => 'aly', 'AL1G49050' => 'aly', 'AL1G53810' => 'aly', 'AL1G61400' => 'aly', 'AL4G18580' => 'aly', 'AL5G12510' => 'aly', 'AL5G12540' => 'aly', 'AL6G43230' => 'aly', 'AL7G10370' => 'aly', 'AL7G19250' => 'aly', 'AL8G12240' => 'aly', 'AL8G18540' => 'aly', 'Aqoxy1G02409' => 'aox', 'Aqoxy2G03993' => 'aox', 'Aqoxy3G03357' => 'aox', 'Aqoxy4G00785' => 'aox', 'Aqoxy5G02598' => 'aox', 'Aqoxy6G00132' => 'aox', 'Aqoxy7G01776' => 'aox', 'Aqoxy7G02316' => 'aox', 'Aqoxy7G03973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.12AFKW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B8730' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27IQR1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3F75VG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3RE0GA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41TCQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.527VTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FIR39' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5W8UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DA38EV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ63HS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H1I32C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HC27T5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4M8AP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7N3CZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9UVDZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LS1NQA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT1D4B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SKC4TM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCFV76' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF9Q1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQWD9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1ZM88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WE07RT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YCK7VH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJE6Q6' => 'arhy', 'AT1G28240' => 'ath', 'AT1G34550' => 'ath', 'AT1G53040' => 'ath', 'AT2G02910' => 'ath', 'AT4G09630' => 'ath', 'AT4G38500' => 'ath', 'AT5G42660' => 'ath', 'AT5G46220' => 'ath', 'ATR0152G026' => 'atr', 'ATR0564G343' => 'atr', 'ATR0706G151' => 'atr', 'ATR0733G207' => 'atr', 'ATR0751G234' => 'atr', 'ATR0807G048' => 'atr', 'ATR1091G084' => 'atr', 'Atru.chr10.1229' => 'acertr', 'Atru.chr10.1230' => 'acertr', 'Atru.chr10.1874' => 'acertr', 'Atru.chr11.1808' => 'acertr', 'Atru.chr13.1795' => 'acertr', 'Atru.chr13.570' => 'acertr', 'Atru.chr2.2608' => 'acertr', 'Atru.chr2.2609' => 'acertr', 'Atru.chr5.3428' => 'acertr', 'Atru.chr8.1171' => 'acertr', 'AUR62004651' => 'cqu', 'AUR62008675' => 'cqu', 'AUR62010014' => 'cqu', 'AUR62013004' => 'cqu', 'AUR62014825' => 'cqu', 'AUR62015015' => 'cqu', 'AUR62015151' => 'cqu', 'AUR62017020' => 'cqu', 'AUR62019422' => 'cqu', 'AUR62023570' => 'cqu', 'AUR62025571' => 'cqu', 'AUR62029098' => 'cqu', 'AUR62033863' => 'cqu', 'AUR62034296' => 'cqu', 'AUR62040075' => 'cqu', 'BcaB02g07334' => 'bca', 'BcaB02g10575' => 'bca', 'BcaB03g12119' => 'bca', 'BcaB03g12120' => 'bca', 'BcaB03g13945' => 'bca', 'BcaB04g17123' => 'bca', 'BcaB04g17867' => 'bca', 'BcaB04g19839' => 'bca', 'BcaB07g30317' => 'bca', 'BcaB07g32432' => 'bca', 'BcaB07g33362' => 'bca', 'BcaB08g36611' => 'bca', 'BcaC01g00028' => 'bca', 'BcaC01g01356' => 'bca', 'BcaC01g02034' => 'bca', 'BcaC01g06051' => 'bca', 'BcaC03g16839' => 'bca', 'BcaC03g17176' => 'bca', 'BcaC05g26829' => 'bca', 'BcaC06g31490' => 'bca', 'BcaC06g35344' => 'bca', 'BcaC06g36570' => 'bca', 'BcaC07g37537' => 'bca', 'BcaC08g43491' => 'bca', 'BcaC08g43773' => 'bca', 'BcaNung00234' => 'bca', 'BcaNung01982' => 'bca', 'BcaNung03707' => 'bca', 'BcaNung06454' => 'bca', 'BolC2t10762H' => 'bol', 'BolC2t11191H' => 'bol', 'BolC3t14322H' => 'bol', 'BolC3t19747H' => 'bol', 'BolC3t21425H' => 'bol', 'BolC4t27800H' => 'bol', 'BolC5t31423H' => 'bol', 'BolC6t35951H' => 'bol', 'BolC6t36282H' => 'bol', 'BolC7t40678H' => 'bol', 'BolC7t40679H' => 'bol', 'BolC7t42222H' => 'bol', 'BolC7t43492H' => 'bol', 'BolC7t46785H' => 'bol', 'BolC8t47853H' => 'bol', 'BolC9t56805H' => 'bol', 'BraA02t08000Z' => 'bra', 'BraA02t08341Z' => 'bra', 'BraA03t10936Z' => 'bra', 'BraA03t15657Z' => 'bra', 'BraA04t18100Z' => 'bra', 'BraA05t20523Z' => 'bra', 'BraA06t23353Z' => 'bra', 'BraA06t27473Z' => 'bra', 'BraA06t27769Z' => 'bra', 'BraA07t28928Z' => 'bra', 'BraA08t32236Z' => 'bra', 'BraA08t32841Z' => 'bra', 'BraA08t34524Z' => 'bra', 'BraA09t38742Z' => 'bra', 'BraA09t39295Z' => 'bra', 'C02p47180' => 'bna', 'C02p50990' => 'bna', 'C03p19360' => 'bna', 'C03p74950' => 'bna', 'C03p91000' => 'bna', 'C04p63260' => 'bna', 'C05p27050' => 'bna', 'C06p08750' => 'bna', 'C06p11490' => 'bna', 'C07p02820' => 'bna', 'C07p17180' => 'bna', 'C07p29440' => 'bna', 'C07p63730' => 'bna', 'C09p39260' => 'bna', 'CAN.G1164.34' => 'can', 'CAN.G1164.39' => 'can', 'CAN.G1530.3' => 'can', 'CAN.G162.61' => 'can', 'CAN.G176.6' => 'can', 'CAN.G289.49' => 'can', 'CAN.G370.21' => 'can', 'CAN.G370.22' => 'can', 'CAN.G371.117' => 'can', 'CAN.G58.37' => 'can', 'CAN.G588.98' => 'can', 'CANSAT21G2266' => 'cansat', 'CANSAT25G2799' => 'cansat', 'CANSAT35G0862' => 'cansat', 'CANSAT35G1704' => 'cansat', 'CANSAT35G1760' => 'cansat', 'CANSAT56G3971' => 'cansat', 'CANSAT56G4116' => 'cansat', 'CANSAT80G1259' => 'cansat', 'CARHR027730' => 'chi', 'CARHR033880' => 'chi', 'CARHR043270' => 'chi', 'CARHR145330' => 'chi', 'CARHR145340' => 'chi', 'CARHR175570' => 'chi', 'CARHR181570' => 'chi', 'CARHR258470' => 'chi', 'CARHR260490' => 'chi', 'CARHR294220' => 'chi', 'Carub.0001s2668' => 'cru', 'Carub.0001s3257' => 'cru', 'Carub.0001s4220' => 'cru', 'Carub.0005s0179' => 'cru', 'Carub.0006s2807' => 'cru', 'Carub.0007s0039' => 'cru', 'Carub.0008s0169' => 'cru', 'Carub.0008s0636' => 'cru', 'Ca_00338_v3' => 'car', 'Ca_00542_v3' => 'car', 'Ca_01844_v3' => 'car', 'Ca_10611_v3' => 'car', 'Ca_13326_v3' => 'car', 'Ca_17944_v3' => 'car', 'Ca_18546_v3' => 'car', 'Ca_24219_v3' => 'car', 'Ca_29972_v3' => 'car', 'CBR_g3681' => 'cbr', 'CBR_g40021' => 'cbr', 'Cc01_g08140' => 'ccan', 'Cc02_g13410' => 'ccan', 'Cc02_g37480' => 'ccan', 'Cc05_g12030' => 'ccan', 'Cc09_g03370' => 'ccan', 'Cc09_g10300' => 'ccan', 'Cc10_g03530' => 'ccan', 'Cc10_g11380' => 'ccan', 'CDE01G0176' => 'cde', 'CDE02G0675' => 'cde', 'CDE02G0942' => 'cde', 'CDE02G1153' => 'cde', 'CDE02G4177' => 'cde', 'CDE04G2117' => 'cde', 'CDE04G2736' => 'cde', 'CDE08G1161' => 'cde', 'CDE09G1238' => 'cde', 'Cfa000467' => 'cfa', 'Cfa000947' => 'cfa', 'Cfa004969' => 'cfa', 'Cfa005284' => 'cfa', 'Cfa008993' => 'cfa', 'Cfa018187' => 'cfa', 'Cfa018454' => 'cfa', 'Cfa020585' => 'cfa', 'Ciclev10000424m.g' => 'ccl', 'Ciclev10003605m.g' => 'ccl', 'Ciclev10007828m.g' => 'ccl', 'Ciclev10014620m.g' => 'ccl', 'Ciclev10015169m.g' => 'ccl', 'Ciclev10018291m.g' => 'ccl', 'Ciclev10028256m.g' => 'ccl', 'Ciclev10033822m.g' => 'ccl', 'CiPaw.05G060300' => 'cil', 'CiPaw.05G085000' => 'cil', 'CiPaw.06G083700' => 'cil', 'CiPaw.06G120300' => 'cil', 'CiPaw.09G060500' => 'cil', 'CiPaw.09G123800' => 'cil', 'CiPaw.11G169700' => 'cil', 'CiPaw.12G118300' => 'cil', 'CiPaw.15G071000' => 'cil', 'CiPaw.15G081900' => 'cil', 'ClCG01G024610' => 'cla', 'ClCG03G006070' => 'cla', 'ClCG05G019250' => 'cla', 'ClCG09G009500' => 'cla', 'ClCG11G008200' => 'cla', 'ClCG11G018080' => 'cla', 'COL.COLO4_17373' => 'col', 'COL.COLO4_22994' => 'col', 'COL.COLO4_26389' => 'col', 'COL.COLO4_27170' => 'col', 'COL.COLO4_31074' => 'col', 'COL.COLO4_31465' => 'col', 'COL.COLO4_36438' => 'col', 'COL.COLO4_36439' => 'col', 'Cpa.g.c38781' => 'cpa', 'Cpa.g.sc128.12' => 'cpa', 'Cpa.g.sc166.7' => 'cpa', 'Cpa.g.sc166.8' => 'cpa', 'Cpa.g.sc20.111' => 'cpa', 'Cpa.g.sc27.31' => 'cpa', 'Cpa.g.sc64.36' => 'cpa', 'Cpa.g.sc64.37' => 'cpa', 'Cpa.g.sc66.49' => 'cpa', 'Cpa.g.sc80.64' => 'cpa', 'CsaV3_1G012320' => 'csa', 'CsaV3_2G008480' => 'csa', 'CsaV3_2G033450' => 'csa', 'CsaV3_3G044830' => 'csa', 'CsaV3_4G033710' => 'csa', 'CsaV3_6G051730' => 'csa', 'CsaV3_7G025350' => 'csa', 'CSS0001067' => 'camsi', 'CSS0005996' => 'camsi', 'CSS0006590' => 'camsi', 'CSS0009673' => 'camsi', 'CSS0010201' => 'camsi', 'CSS0010549' => 'camsi', 'CSS0011364' => 'camsi', 'CSS0014473' => 'camsi', 'CSS0014961' => 'camsi', 'CSS0020191' => 'camsi', 'CSS0021165' => 'camsi', 'CSS0022306' => 'camsi', 'CSS0030591' => 'camsi', 'CSS0030696' => 'camsi', 'CSS0032653' => 'camsi', 'CSS0037487' => 'camsi', 'CSS0041102' => 'camsi', 'CSS0041261' => 'camsi', 'CSS0046246' => 'camsi', 'CSS0049256' => 'camsi', 'DCAR_004075' => 'dca', 'DCAR_011538' => 'dca', 'DCAR_019553' => 'dca', 'DCAR_020952' => 'dca', 'DCAR_021739' => 'dca', 'DCAR_027407' => 'dca', 'DCAR_027913' => 'dca', 'DCAR_028066' => 'dca', 'Dinv05899' => 'din', 'Dinv07563' => 'din', 'Dinv08010' => 'din', 'Dinv14125' => 'din', 'Dinv20172' => 'din', 'Dinv30743' => 'din', 'Dinv31229' => 'din', 'Dinv34162' => 'din', 'Dinv36028' => 'din', 'Dinv39368' => 'din', 'Dinv40565' => 'din', 'Dinv41706' => 'din', 'Duzib052G0089' => 'dzi', 'Duzib116G0641' => 'dzi', 'Duzib132G0069' => 'dzi', 'Duzib132G1219' => 'dzi', 'Duzib147G0278' => 'dzi', 'Duzib160G0480' => 'dzi', 'Duzib170G0661' => 'dzi', 'Duzib177G0591' => 'dzi', 'Duzib187G1353' => 'dzi', 'Duzib192G0858' => 'dzi', 'Duzib192G0883' => 'dzi', 'Duzib213G0506' => 'dzi', 'Duzib235G0289' => 'dzi', 'Duzib251G0422' => 'dzi', 'ECA232G3898' => 'eca', 'ECA233G5950' => 'eca', 'ECA234G1699' => 'eca', 'ECA234G2421' => 'eca', 'ECA236G0426' => 'eca', 'ECA236G4331' => 'eca', 'ECA248G2573' => 'eca', 'EL10Ac1g00077' => 'bvu', 'EL10Ac1g01746' => 'bvu', 'EL10Ac2g03464' => 'bvu', 'EL10Ac4g08176' => 'bvu', 'EL10Ac7g17521' => 'bvu', 'EL10Ac8g20386' => 'bvu', 'EL10Ac9g21343' => 'bvu', 'EL10Ac9g22688' => 'bvu', 'Eucgr.B03434' => 'egr', 'Eucgr.D00618' => 'egr', 'Eucgr.E02395' => 'egr', 'Eucgr.F01129' => 'egr', 'Eucgr.F02622' => 'egr', 'Eucgr.F04207' => 'egr', 'FAN01G0570' => 'fan', 'FAN03G3351' => 'fan', 'FAN06G3702' => 'fan', 'FAN07G2149' => 'fan', 'FAN10G3758' => 'fan', 'FAN11G1170' => 'fan', 'FAN11G2050' => 'fan', 'FAN11G2724' => 'fan', 'FAN12G1700' => 'fan', 'FAN12G2028' => 'fan', 'FAN15G1160' => 'fan', 'FAN15G3063' => 'fan', 'FAN16G2540' => 'fan', 'FAN16G3077' => 'fan', 'FAN16G3624' => 'fan', 'FAN17G0221' => 'fan', 'FAN20G2492' => 'fan', 'FAN20G2905' => 'fan', 'FAN21G0548' => 'fan', 'FAN21G1300' => 'fan', 'FAN22G0077' => 'fan', 'FAN22G1315' => 'fan', 'FAN24G1280' => 'fan', 'FAN24G1445' => 'fan', 'FAN24G3527' => 'fan', 'FAN25G0464' => 'fan', 'FAN25G2885' => 'fan', 'FAN25G3270' => 'fan', 'FAN27G1101' => 'fan', 'FAN27G2846' => 'fan', 'FAN27G3524' => 'fan', 'FvH4_2g11770' => 'fve', 'FvH4_2g15630' => 'fve', 'FvH4_3g05570' => 'fve', 'FvH4_3g09110' => 'fve', 'FvH4_3g19940' => 'fve', 'FvH4_4g04821' => 'fve', 'FvH4_4g31480' => 'fve', 'FvH4_7g01740' => 'fve', 'Glyma.05G130400' => 'gma', 'Glyma.05G156400' => 'gma', 'Glyma.07G197000' => 'gma', 'Glyma.08G085151' => 'gma', 'Glyma.08G114500' => 'gma', 'Glyma.08G300400' => 'gma', 'Glyma.10G215800' => 'gma', 'Glyma.12G224400' => 'gma', 'Glyma.13G179300' => 'gma', 'Glyma.13G218151' => 'gma', 'Glyma.13G238800' => 'gma', 'Glyma.13G276900' => 'gma', 'Glyma.14G078200' => 'gma', 'Glyma.15G074500' => 'gma', 'Glyma.15G094100' => 'gma', 'Glyma.17G247200' => 'gma', 'Glyma.18G120100' => 'gma', 'Glyma.20G176000' => 'gma', 'Gohir.A01G063600' => 'ghi', 'Gohir.A01G170301' => 'ghi', 'Gohir.A02G060500' => 'ghi', 'Gohir.A05G133850' => 'ghi', 'Gohir.A05G161400' => 'ghi', 'Gohir.A06G012900' => 'ghi', 'Gohir.A06G035901' => 'ghi', 'Gohir.A06G127100' => 'ghi', 'Gohir.A06G210500' => 'ghi', 'Gohir.A08G008650' => 'ghi', 'Gohir.A09G072700' => 'ghi', 'Gohir.A09G088301' => 'ghi', 'Gohir.A10G040600' => 'ghi', 'Gohir.A12G036300' => 'ghi', 'Gohir.A12G143350' => 'ghi', 'Gohir.A12G165500' => 'ghi', 'Gohir.A13G145700' => 'ghi', 'Gohir.D01G050000' => 'ghi', 'Gohir.D01G051366' => 'ghi', 'Gohir.D01G161350' => 'ghi', 'Gohir.D02G065900' => 'ghi', 'Gohir.D05G164200' => 'ghi', 'Gohir.D05G355500' => 'ghi', 'Gohir.D06G010400' => 'ghi', 'Gohir.D06G111250' => 'ghi', 'Gohir.D06G132000' => 'ghi', 'Gohir.D06G210500' => 'ghi', 'Gohir.D07G165675' => 'ghi', 'Gohir.D08G062240' => 'ghi', 'Gohir.D08G086101' => 'ghi', 'Gohir.D08G138060' => 'ghi', 'Gohir.D09G072300' => 'ghi', 'Gohir.D10G041400' => 'ghi', 'Gohir.D11G191020' => 'ghi', 'Gohir.D11G212066' => 'ghi', 'Gohir.D12G036300' => 'ghi', 'Gohir.D12G168600' => 'ghi', 'Gohir.D13G150600' => 'ghi', 'Gorai.001G057300' => 'gra', 'Gorai.002G069900' => 'gra', 'Gorai.002G200000' => 'gra', 'Gorai.003G067600' => 'gra', 'Gorai.005G074800' => 'gra', 'Gorai.006G087300' => 'gra', 'Gorai.008G037500' => 'gra', 'Gorai.008G181400' => 'gra', 'Gorai.009G169400' => 'gra', 'Gorai.009G387900' => 'gra', 'Gorai.010G013300' => 'gra', 'Gorai.010G153800' => 'gra', 'Gorai.010G255800' => 'gra', 'Gorai.011G043700' => 'gra', 'Gorai.011G198900' => 'gra', 'Gorai.013G168400' => 'gra', 'GSVIVG01005212001' => 'vvi', 'GSVIVG01006163001' => 'vvi', 'GSVIVG01009625001' => 'vvi', 'GSVIVG01014338001' => 'vvi', 'GSVIVG01020005001' => 'vvi', 'GSVIVG01021450001' => 'vvi', 'GSVIVG01023975001' => 'vvi', 'GSVIVG01034490001' => 'vvi', 'HanXRQChr04g0112071' => 'han', 'HanXRQChr05g0131151' => 'han', 'HanXRQChr09g0262371' => 'han', 'HanXRQChr09g0268401' => 'han', 'HanXRQChr10g0279241' => 'han', 'HanXRQChr10g0297961' => 'han', 'HanXRQChr11g0326231' => 'han', 'HanXRQChr11g0328471' => 'han', 'HanXRQChr16g0507941' => 'han', 'HanXRQChr17g0560211' => 'han', 'Haze_02108' => 'cav', 'Haze_02428' => 'cav', 'Haze_05593' => 'cav', 'Haze_06448' => 'cav', 'Haze_09427' => 'cav', 'Haze_12022' => 'cav', 'Haze_17612' => 'cav', 'Haze_17928' => 'cav', 'Hma1.2p1_0032F.1_g019250' => 'hma', 'Hma1.2p1_0163F.1_g072690' => 'hma', 'Hma1.2p1_0265F.1_g106710' => 'hma', 'Hma1.2p1_0286F.1_g113970' => 'hma', 'Hma1.2p1_0363F.1_g136640' => 'hma', 'Hma1.2p1_0584F.1_g183470' => 'hma', 'Hma1.2p1_0885F.1_g232570' => 'hma', 'HPP92_006022' => 'vpl', 'HPP92_007320' => 'vpl', 'HPP92_011521' => 'vpl', 'HPP92_019387' => 'vpl', 'HPP92_024038' => 'vpl', 'Hund05891' => 'sun', 'Hund06450' => 'sun', 'Hund12053' => 'sun', 'Hund16800' => 'sun', 'Hund21222' => 'sun', 'Hund22896' => 'sun', 'Hund23746' => 'sun', 'Hund27083' => 'sun', 'Lalb_Chr02g0141831' => 'lal', 'Lalb_Chr02g0141841' => 'lal', 'Lalb_Chr05g0220411' => 'lal', 'Lalb_Chr06g0162081' => 'lal', 'Lalb_Chr09g0327651' => 'lal', 'Lalb_Chr13g0295051' => 'lal', 'Lalb_Chr15g0086801' => 'lal', 'Lalb_Chr16g0383781' => 'lal', 'Lalb_Chr16g0383791' => 'lal', 'Lalb_Chr18g0055441' => 'lal', 'Lalb_Chr18g0059611' => 'lal', 'Lalb_Chr20g0109661' => 'lal', 'Lalb_Chr20g0109831' => 'lal', 'Lalb_Chr20g0121871' => 'lal', 'Lalb_Chr22g0355361' => 'lal', 'Lalb_Chr25g0286371' => 'lal', 'Lj1A1187G43' => 'lonja', 'Lj1A1205T50' => 'lonja', 'Lj1A800G33' => 'lonja', 'Lj1C1187T7' => 'lonja', 'Lj1C843T11' => 'lonja', 'Lj1g0010940' => 'lja', 'Lj2A288T69' => 'lonja', 'Lj3g0024276' => 'lja', 'Lj4A47T76' => 'lonja', 'Lj4g0005805' => 'lja', 'Lj4g0006097' => 'lja', 'Lj4g0008528' => 'lja', 'Lj4g0024907' => 'lja', 'Lj5g0012472' => 'lja', 'Lj5g0018648' => 'lja', 'Lj6C789G1' => 'lonja', 'Lj6g0004000' => 'lja', 'Lj7A292G67' => 'lonja', 'Lj7A292T64' => 'lonja', 'Lj9A400T58' => 'lonja', 'Lsat_1_v5_gn_1_126181' => 'lsa', 'Lsat_1_v5_gn_4_123041' => 'lsa', 'Lsat_1_v5_gn_4_133620' => 'lsa', 'Lsat_1_v5_gn_4_53221' => 'lsa', 'Lsat_1_v5_gn_4_71961' => 'lsa', 'Lsat_1_v5_gn_7_105241' => 'lsa', 'Lsat_1_v5_gn_7_21361' => 'lsa', 'Lsat_1_v5_gn_7_28860' => 'lsa', 'Lsat_1_v5_gn_7_31260' => 'lsa', 'Lsat_1_v5_gn_8_52801' => 'lsa', 'Manes.02G191400' => 'mes', 'Manes.03G110100' => 'mes', 'Manes.04G071100' => 'mes', 'Manes.05G100500' => 'mes', 'Manes.05G164700' => 'mes', 'Manes.15G087000' => 'mes', 'Manes.15G121500' => 'mes', 'Manes.16G028300' => 'mes', 'Manes.17G046100' => 'mes', 'Manes.17G069800' => 'mes', 'Manes.18G100500' => 'mes', 'Mapoly0002s0109' => 'mpo', 'Mapoly0024s0007' => 'mpo', 'Mapoly0089s0032' => 'mpo', 'MBI04_g42241_MAGBIO' => 'mbi', 'MBI05_g11988_MAGBIO' => 'mbi', 'MBI05_g35452_MAGBIO' => 'mbi', 'MBI07_g30179_MAGBIO' => 'mbi', 'MBI07_g35859_MAGBIO' => 'mbi', 'MBI07_g35860_MAGBIO' => 'mbi', 'MBI07_g37166_MAGBIO' => 'mbi', 'MBI08_g18172_MAGBIO' => 'mbi', 'MBI09_g08441_MAGBIO' => 'mbi', 'MBI13_g01676_MAGBIO' => 'mbi', 'MBI14_g42955_MAGBIO' => 'mbi', 'MBI16_g13161_MAGBIO' => 'mbi', 'MBI17_g27204_MAGBIO' => 'mbi', 'MBI19_g21595_MAGBIO' => 'mbi', 'MD00G1148400' => 'mdo', 'MD02G1301200' => 'mdo', 'MD03G1227800' => 'mdo', 'MD05G1041100' => 'mdo', 'MD05G1124800' => 'mdo', 'MD05G1284000' => 'mdo', 'MD05G1338800' => 'mdo', 'MD05G1338900' => 'mdo', 'MD07G1022800' => 'mdo', 'MD10G1047500' => 'mdo', 'MD10G1127500' => 'mdo', 'MD10G1262300' => 'mdo', 'MD10G1293800' => 'mdo', 'MD16G1074300' => 'mdo', 'Medtr1g021670' => 'mtr', 'Medtr1g096320' => 'mtr', 'Medtr2g013690' => 'mtr', 'Medtr2g019450' => 'mtr', 'Medtr2g085170' => 'mtr', 'Medtr4g088785' => 'mtr', 'Medtr8g055930' => 'mtr', 'Medtr8g085850' => 'mtr', 'MELO3C002605.2' => 'cme', 'MELO3C003891.2' => 'cme', 'MELO3C004012.2' => 'cme', 'MELO3C007134.2' => 'cme', 'MELO3C008118.2' => 'cme', 'MELO3C016700.2' => 'cme', 'MELO3C024127.2' => 'cme', 'MELO3C033361.2' => 'cme', 'MELO3C033362.2' => 'cme', 'Migut.C00430' => 'egut', 'Migut.C01246' => 'egut', 'Migut.E00101' => 'egut', 'Migut.H01486' => 'egut', 'Migut.H01939' => 'egut', 'Migut.K00360' => 'egut', 'Migut.M00910' => 'egut', 'Migut.M01139' => 'egut', 'Migut.N02677' => 'egut', 'MSTRG.13252' => 'ama', 'MSTRG.14701' => 'ama', 'MSTRG.1521' => 'ama', 'MSTRG.15884' => 'ama', 'MSTRG.16242' => 'ama', 'MSTRG.22285' => 'ama', 'MSTRG.22444' => 'ama', 'MSTRG.2349' => 'ama', 'MSTRG.26308' => 'ama', 'MSTRG.28296' => 'ama', 'MSTRG.9895' => 'ama', 'Nitab4.5_0000110g0060' => 'nta', 'Nitab4.5_0000420g0130' => 'nta', 'Nitab4.5_0000422g0030' => 'nta', 'Nitab4.5_0000560g0180' => 'nta', 'Nitab4.5_0000703g0100' => 'nta', 'Nitab4.5_0000786g0200' => 'nta', 'Nitab4.5_0001336g0020' => 'nta', 'Nitab4.5_0001796g0030' => 'nta', 'Nitab4.5_0003348g0060' => 'nta', 'Nitab4.5_0003698g0040' => 'nta', 'Nitab4.5_0003942g0090' => 'nta', 'Nitab4.5_0004775g0070' => 'nta', 'Nitab4.5_0004864g0030' => 'nta', 'Nitab4.5_0005615g0020' => 'nta', 'Nitab4.5_0009288g0030' => 'nta', 'Nitab4.5_0009341g0010' => 'nta', 'Nitab4.5_0009535g0010' => 'nta', 'Nn1g03995' => 'nnu', 'Nn1g04100' => 'nnu', 'Nn1g06530' => 'nnu', 'Nn3g16404' => 'nnu', 'Nn3g17212' => 'nnu', 'Nn3g20776' => 'nnu', 'Nn3g21923' => 'nnu', 'Nn5g27737' => 'nnu', 'Nn5g29461' => 'nnu', 'Nn7g38355' => 'nnu', 'Nn8g39873' => 'nnu', 'Oeu000548.2' => 'oeu', 'Oeu004672.1' => 'oeu', 'Oeu015605.2' => 'oeu', 'Oeu016092.1' => 'oeu', 'Oeu017879.3' => 'oeu', 'Oeu024910.1' => 'oeu', 'Oeu028965.1' => 'oeu', 'Oeu031269.1' => 'oeu', 'Oeu031270.1' => 'oeu', 'Oeu032535.1' => 'oeu', 'Oeu034151.1' => 'oeu', 'Oeu034152.1' => 'oeu', 'Oeu034588.2' => 'oeu', 'Oeu050846.1' => 'oeu', 'Oeu050849.2' => 'oeu', 'Oeu051063.2' => 'oeu', 'Oeu052368.1' => 'oeu', 'Oeu052370.1' => 'oeu', 'Os01g0210400' => 'osa', 'Os01g0304300' => 'osa', 'Os01g0749100' => 'osa', 'Os02g0745800' => 'osa', 'Os03g0769050' => 'osa', 'Os05g0531500' => 'osa', 'Os06g0724300' => 'osa', 'Os11g0198100' => 'osa', 'Peaxi162Scf00069g01425' => 'pax', 'Peaxi162Scf00280g00811' => 'pax', 'Peaxi162Scf00310g00615' => 'pax', 'Peaxi162Scf00362g00542' => 'pax', 'Peaxi162Scf00461g00310' => 'pax', 'Peaxi162Scf00530g00118' => 'pax', 'Peaxi162Scf00541g00057' => 'pax', 'Peaxi162Scf00661g00017' => 'pax', 'Peaxi162Scf00926g00027' => 'pax', 'Peaxi162Scf01064g00263' => 'pax', 'Peaxi162Scf01211g00135' => 'pax', 'PGR004G2336' => 'pgr', 'PGR042G0327' => 'pgr', 'PGR042G1957' => 'pgr', 'PGR042G2003' => 'pgr', 'PGR042G3929' => 'pgr', 'PGR083G1137' => 'pgr', 'PGR083G1364' => 'pgr', 'PGSC0003DMG400003381' => 'stu', 'PGSC0003DMG400003417' => 'stu', 'PGSC0003DMG400008981' => 'stu', 'PGSC0003DMG400012417' => 'stu', 'PGSC0003DMG400012823' => 'stu', 'PGSC0003DMG400016885' => 'stu', 'PGSC0003DMG400022812' => 'stu', 'PGSC0003DMG400029726' => 'stu', 'PGSC0003DMG401009243' => 'stu', 'PGSC0003DMG401031505' => 'stu', 'PGSC0003DMG402031505' => 'stu', 'Phvul.001G017600' => 'pvu', 'Phvul.002G193500' => 'pvu', 'Phvul.002G228900' => 'pvu', 'Phvul.002G236800' => 'pvu', 'Phvul.003G049500' => 'pvu', 'Phvul.005G072000' => 'pvu', 'Phvul.006G164800' => 'pvu', 'Phvul.006G185100' => 'pvu', 'Phvul.007G090000' => 'pvu', 'Potri.001G399800' => 'ptr', 'Potri.002G149900' => 'ptr', 'Potri.004G044100' => 'ptr', 'Potri.004G177600' => 'ptr', 'Potri.009G138000' => 'ptr', 'Potri.010G094000' => 'ptr', 'Potri.011G053000' => 'ptr', 'Potri.011G119300' => 'ptr', 'Potri.013G113700' => 'ptr', 'Potri.018G107800' => 'ptr', 'Potri.019G084100' => 'ptr', 'Pp3c14_23720' => 'ppa', 'Pp3c16_6340' => 'ppa', 'Pp3c23_13420' => 'ppa', 'Pp3c24_2740' => 'ppa', 'Pp3c25_860' => 'ppa', 'Pp3c8_21750' => 'ppa', 'Prupe.1G273000' => 'ppe', 'Prupe.1G273700' => 'ppe', 'Prupe.1G274100' => 'ppe', 'Prupe.2G023300' => 'ppe', 'Prupe.4G048000' => 'ppe', 'Prupe.4G080400' => 'ppe', 'Prupe.4G181200' => 'ppe', 'Prupe.8G056900' => 'ppe', 'Prupe.8G168700' => 'ppe', 'Psat1g189080' => 'psa', 'Psat1g204760' => 'psa', 'Psat4g175560' => 'psa', 'Psat4g177720' => 'psa', 'Psat5g244240' => 'psa', 'Psat6g010720' => 'psa', 'Psat6g187200' => 'psa', 'Psat7g072040' => 'psa', 'PSO017G3501' => 'pso', 'PSO063G2148' => 'pso', 'PSO063G5608' => 'pso', 'PSO210G6392' => 'pso', 'PSO541G2319' => 'pso', 'PSO541G2836' => 'pso', 'PSO541G4012' => 'pso', 'PSO541G6253' => 'pso', 'PSO675G0580' => 'pso', 'PSO675G0856' => 'pso', 'PSO675G5635' => 'pso', 'PSO675G9157' => 'pso', 'PSO832G1660' => 'pso', 'PSO832G1969' => 'pso', 'QL02p007186' => 'qlo', 'QL02p033904' => 'qlo', 'QL03p064391' => 'qlo', 'QL05p040593' => 'qlo', 'QL05p058242' => 'qlo', 'QL08p021825' => 'qlo', 'QL11p004981' => 'qlo', 'RcHm_v2.0_Chr1g0318301' => 'rch', 'RcHm_v2.0_Chr4g0418501' => 'rch', 'RcHm_v2.0_Chr4g0439971' => 'rch', 'RcHm_v2.0_Chr5g0008541' => 'rch', 'RcHm_v2.0_Chr5g0014101' => 'rch', 'RcHm_v2.0_Chr5g0014131' => 'rch', 'RcHm_v2.0_Chr5g0033621' => 'rch', 'RcHm_v2.0_Chr6g0272041' => 'rch', 'RcHm_v2.0_Chr6g0278831' => 'rch', 'Rhsim02G0130400' => 'rsi', 'Rhsim02G0171100' => 'rsi', 'Rhsim05G0053000' => 'rsi', 'Rhsim05G0053100' => 'rsi', 'Rhsim06G0096500' => 'rsi', 'Rhsim06G0096600' => 'rsi', 'Rhsim06G0199100' => 'rsi', 'Rhsim12G0062300' => 'rsi', 'Rhsim12G0062800' => 'rsi', 'Sabra02G0118600' => 'sbr', 'Sabra04G0027300' => 'sbr', 'Sabra04G0119500' => 'sbr', 'Sabra08G0112500' => 'sbr', 'Sabra11G0036800' => 'sbr', 'Sabra11G0103800' => 'sbr', 'Sabra13G0096300' => 'sbr', 'Sabra16G0262300' => 'sbr', 'Sabra18G0091700' => 'sbr', 'Sabra19G0095400' => 'sbr', 'SalBow6G3080' => 'sbo', 'SalBow7G1157' => 'sbo', 'SalBow7G2123' => 'sbo', 'SalBow7G2285' => 'sbo', 'SalBow7G3537' => 'sbo', 'SalBow8G2947' => 'sbo', 'SalBow8G4463' => 'sbo', 'SalBow8G5466' => 'sbo', 'Sc01g0001750' => 'sci', 'Sc02g0006640' => 'sci', 'Sc02g0006670' => 'sci', 'Sc04g0008220' => 'sci', 'Sc05g0006190' => 'sci', 'Sc08g0002760' => 'sci', 'Sc17g0006170' => 'sci', 'Sc22g0002050' => 'sci', 'Sc23g0001190' => 'sci', 'Sc24g0000980' => 'sci', 'Sed0006245' => 'sed', 'Sed0007543' => 'sed', 'Sed0009411' => 'sed', 'Sed0010765' => 'sed', 'Sed0012944' => 'sed', 'Sed0014682' => 'sed', 'Sed0016174' => 'sed', 'Sed0016796' => 'sed', 'Sed0020317' => 'sed', 'Sed0021467' => 'sed', 'SEGI_01316' => 'sgi', 'SEGI_03374' => 'sgi', 'SEGI_16265' => 'sgi', 'SEGI_18569' => 'sgi', 'SEGI_20351' => 'sgi', 'SEGI_26395' => 'sgi', 'SEGI_29469' => 'sgi', 'SEGI_34771' => 'sgi', 'SEGI_36769' => 'sgi', 'SEGI_37139' => 'sgi', 'SGA_v2.0_scaffold100G29687' => 'sas', 'SGA_v2.0_scaffold118G32472' => 'sas', 'SGA_v2.0_scaffold14G07051' => 'sas', 'SGA_v2.0_scaffold183G39845' => 'sas', 'SGA_v2.0_scaffold1G00174' => 'sas', 'SGA_v2.0_scaffold22G09714' => 'sas', 'SGA_v2.0_scaffold333G48992' => 'sas', 'SGA_v2.0_scaffold46G17491' => 'sas', 'SGA_v2.0_scaffold49G18294' => 'sas', 'SGA_v2.0_scaffold63G21658' => 'sas', 'SHI01741' => 'shi', 'SHI05771' => 'shi', 'SHI18077' => 'shi', 'SHI20525' => 'shi', 'SHI20527' => 'shi', 'SHI20528' => 'shi', 'SMO172G0185' => 'smo', 'SMO198G0020' => 'smo', 'SMO351G0006' => 'smo', 'SMO356G0118' => 'smo', 'SMO358G0296' => 'smo', 'SMO367G0079' => 'smo', 'SMO367G1277' => 'smo', 'Solyc01g014220.3' => 'sly', 'Solyc01g111770.2' => 'sly', 'Solyc02g078180.3' => 'sly', 'Solyc03g006430.3' => 'sly', 'Solyc03g006456.1' => 'sly', 'Solyc03g079860.2' => 'sly', 'Solyc04g079770.3' => 'sly', 'Solyc05g007430.4' => 'sly', 'Solyc07g063150.3' => 'sly', 'Solyc08g016620.3' => 'sly', 'Solyc09g057590.3' => 'sly', 'Solyc09g057600.1' => 'sly', 'Solyc10g009050.3' => 'sly', 'Solyc11g017420.2' => 'sly', 'Sopen01g053810' => 'spe', 'Sopen02g023040' => 'spe', 'Sopen03g002440' => 'spe', 'Sopen04g033350' => 'spe', 'Sopen05g003310' => 'spe', 'Sopen07g004050' => 'spe', 'Sopen07g031340' => 'spe', 'Sopen08g006990' => 'spe', 'Sopen10g004830' => 'spe', 'Sopen11g009370' => 'spe', 'Sp1g24450' => 'spa', 'Sp1g29670' => 'spa', 'Sp1g39600' => 'spa', 'Sp2g11080' => 'spa', 'Sp2g13970' => 'spa', 'Sp4g16130' => 'spa', 'Sp6g13080' => 'spa', 'Sp7g37270' => 'spa', 'TAR371G0065' => 'tar', 'TAR376G0340' => 'tar', 'TAR376G0435' => 'tar', 'TAR381G0002' => 'tar', 'TAR381G1236' => 'tar', 'TAR624G0055' => 'tar', 'TAR624G0324' => 'tar', 'TAR624G0696' => 'tar', 'TAR624G0906' => 'tar', 'TAR625G0107' => 'tar', 'TAR626G0015' => 'tar', 'TAR626G1356' => 'tar', 'TAR627G0888' => 'tar', 'TAR628G0399' => 'tar', 'TAR628G1327' => 'tar', 'TAR629G2831' => 'tar', 'TAR629G2874' => 'tar', 'TAR633G1432' => 'tar', 'TAR633G2771' => 'tar', 'THA.LOC104803394' => 'tha', 'THA.LOC104805153' => 'tha', 'THA.LOC104806784' => 'tha', 'THA.LOC104810473' => 'tha', 'THA.LOC104813100' => 'tha', 'THA.LOC104814215' => 'tha', 'THA.LOC104815554' => 'tha', 'THA.LOC104820544' => 'tha', 'THA.LOC104824754' => 'tha', 'THA.LOC104827717' => 'tha', 'Thecc.02G031400' => 'tca', 'Thecc.02G055900' => 'tca', 'Thecc.02G350800' => 'tca', 'Thecc.06G150900' => 'tca', 'Thecc.06G186600' => 'tca', 'Thecc.07G089600' => 'tca', 'Thecc.08G020400' => 'tca', 'Thecc.08G182100' => 'tca', 'Thhalv10000873m.g' => 'esa', 'Thhalv10004185m.g' => 'esa', 'Thhalv10006981m.g' => 'esa', 'Thhalv10007204m.g' => 'esa', 'Thhalv10011374m.g' => 'esa', 'Thhalv10013482m.g' => 'esa', 'Thhalv10017801m.g' => 'esa', 'Thhalv10024983m.g' => 'esa', 'TPR.G12072' => 'tpr', 'TPR.G15769' => 'tpr', 'TPR.G16504' => 'tpr', 'TPR.G16506' => 'tpr', 'TPR.G24345' => 'tpr', 'TPR.G26666' => 'tpr', 'TPR.G27320' => 'tpr', 'TPR.G31819' => 'tpr', 'TPR.G38879' => 'tpr', 'TPR.G39015' => 'tpr', 'TPR.G8819' => 'tpr', 'TWI09G0924' => 'twi', 'TWI12G0811' => 'twi', 'TWI12G1294' => 'twi', 'TWI31G0150' => 'twi', 'TWI36G1262' => 'twi', 'TWI38G1287' => 'twi', 'TWI38G1633' => 'twi', 'TWI38G1982' => 'twi', 'TWI39G0116' => 'twi', 'TWI60G1011' => 'twi', 'TWI63G0171' => 'twi', 'TWI73G0839' => 'twi', 'TWI79G1511' => 'twi', 'unitig_0.g915' => 'ugi', 'unitig_0.g916' => 'ugi', 'unitig_21.g20219' => 'ugi', 'unitig_21.g20416' => 'ugi', 'unitig_578.g16132' => 'ugi', 'unitig_578.g16718' => 'ugi', 'unitig_62.g23481' => 'ugi', 'unitig_744.g24535' => 'ugi', 'unitig_749.g13525' => 'ugi', 'vmacro01248' => 'vma', 'vmacro02290' => 'vma', 'vmacro10946' => 'vma', 'vmacro11865' => 'vma', 'vmacro12493' => 'vma', 'vmacro17322' => 'vma', 'vmacro21599' => 'vma', 'vmacro23041' => 'vma', 'VMungo0251G0004' => 'vmu', 'VMungo0251G2639' => 'vmu', 'VMungo0251G2967' => 'vmu', 'VMungo0540G0864' => 'vmu', 'VMungo0540G1569' => 'vmu', 'VMungo0647G0317' => 'vmu', 'VMungo0720G1373' => 'vmu', 'VMungo0720G1508' => 'vmu', 'VMungo1080G0485' => 'vmu', 'VMungo1215G3177' => 'vmu', 'Zm00001eb112600' => 'zma', 'Zm00001eb120220' => 'zma', 'Zm00001eb153240' => 'zma', 'Zm00001eb168880' => 'zma', 'Zm00001eb213920' => 'zma', 'Zm00001eb228280' => 'zma', 'Zm00001eb254580' => 'zma', 'Zm00001eb272180' => 'zma', 'Zm00001eb293190' => 'zma', 'Zm00001eb322930' => 'zma', 'Zm00001eb353360' => 'zma', 'Zm00001eb353390' => 'zma', 'Zm00001eb353430' => 'zma', 'Zm00001eb353440' => 'zma', 'Zm00001eb353780' => 'zma' ) $gf_id = 'HOM05D000499' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000499' ) $data_identifier = 'HOM05D000499' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 29, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 12, 'amhyb' => (int) 8, 'aly' => (int) 12, 'aox' => (int) 9, 'arhy' => (int) 26, 'ath' => (int) 8, 'atr' => (int) 7, 'acertr' => (int) 10, 'cqu' => (int) 15, 'bca' => (int) 29, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 11, 'cansat' => (int) 8, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 9, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 8, 'cpa' => (int) 10, 'csa' => (int) 7, 'camsi' => (int) 20, 'dca' => (int) 8, 'din' => (int) 12, 'dzi' => (int) 14, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 6, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 38, 'gra' => (int) 16, 'vvi' => (int) 8, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 5, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 11, 'lja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 11, 'mpo' => (int) 3, 'mbi' => (int) 14, 'mdo' => (int) 14, 'mtr' => (int) 8, 'cme' => (int) 9, 'egut' => (int) 9, 'ama' => (int) 11, 'nta' => (int) 17, 'nnu' => (int) 11, 'oeu' => (int) 18, 'osa' => (int) 8, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 6, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 9, 'rsi' => (int) 9, 'sbr' => (int) 10, 'sbo' => (int) 8, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 10, 'sas' => (int) 10, 'shi' => (int) 6, 'smo' => (int) 7, 'sly' => (int) 14, 'spe' => (int) 10, 'spa' => (int) 8, 'tar' => (int) 19, 'tha' => (int) 10, 'tca' => (int) 8, 'esa' => (int) 8, 'tpr' => (int) 11, 'twi' => (int) 13, 'ugi' => (int) 9, 'vma' => (int) 8, 'vmu' => (int) 10, 'zma' => (int) 15 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb353780' $species_info = array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ) $local_species = 'ama' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000499', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1066', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p29780' => 'bna', 'A02p33180' => 'bna', 'A03p16470' => 'bna', 'A03p66010' => 'bna', 'A04p25970' => 'bna', 'A06p01270' => 'bna', 'A06p46080' => 'bna', 'A07p11400' => 'bna', 'A08p01840' => 'bna', 'A08p08230' => 'bna', 'A08p25740' => 'bna', 'A09p32070' => 'bna', 'A09p37830' => 'bna', 'A09p42840' => 'bna', 'A09p42850' => 'bna', 'Aa31LG10G2060' => 'aar', 'Aa31LG2G7410' => 'aar', 'Aa31LG6G10200' => 'aar', 'Aa31LG6G16680' => 'aar', 'Aa31LG6G8470' => 'aar', 'Aa31LG9G12730' => 'aar', 'Aa31LG9G13680' => 'aar', 'Aa31LG9G14920' => 'aar', 'Aa31LG9G6650' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4977' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5467' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3254' => 'aag', 'Actinidia02578' => 'ach', 'Actinidia07693' => 'ach', 'Actinidia08413' => 'ach', 'Actinidia08414' => 'ach', 'Actinidia15289' => 'ach', 'Actinidia19871' => 'ach', 'Actinidia21475' => 'ach', 'Actinidia22576' => 'ach', 'Actinidia28327' => 'ach', 'Actinidia32491' => 'ach', 'Actinidia39463' => 'ach', 'Actinidia39571' => 'ach', 'Ah.01g013750' => 'amhyb', 'Ah.01g023210' => 'amhyb', 'Ah.04g164850' => 'amhyb', 'Ah.05g178060' => 'amhyb', 'Ah.07g204270' => 'amhyb', 'Ah.07g208480' => 'amhyb', 'Ah.09g237410' => 'amhyb', 'Ah.14g089460' => 'amhyb', 'AL1G41790' => 'aly', 'AL1G49050' => 'aly', 'AL1G53810' => 'aly', 'AL1G61400' => 'aly', 'AL4G18580' => 'aly', 'AL5G12510' => 'aly', 'AL5G12540' => 'aly', 'AL6G43230' => 'aly', 'AL7G10370' => 'aly', 'AL7G19250' => 'aly', 'AL8G12240' => 'aly', 'AL8G18540' => 'aly', 'Aqoxy1G02409' => 'aox', 'Aqoxy2G03993' => 'aox', 'Aqoxy3G03357' => 'aox', 'Aqoxy4G00785' => 'aox', 'Aqoxy5G02598' => 'aox', 'Aqoxy6G00132' => 'aox', 'Aqoxy7G01776' => 'aox', 'Aqoxy7G02316' => 'aox', 'Aqoxy7G03973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.12AFKW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B8730' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27IQR1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3F75VG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3RE0GA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41TCQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.527VTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FIR39' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5W8UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DA38EV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ63HS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H1I32C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HC27T5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4M8AP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7N3CZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9UVDZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LS1NQA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT1D4B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SKC4TM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCFV76' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF9Q1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQWD9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1ZM88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WE07RT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YCK7VH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJE6Q6' => 'arhy', 'AT1G28240' => 'ath', 'AT1G34550' => 'ath', 'AT1G53040' => 'ath', 'AT2G02910' => 'ath', 'AT4G09630' => 'ath', 'AT4G38500' => 'ath', 'AT5G42660' => 'ath', 'AT5G46220' => 'ath', 'ATR0152G026' => 'atr', 'ATR0564G343' => 'atr', 'ATR0706G151' => 'atr', 'ATR0733G207' => 'atr', 'ATR0751G234' => 'atr', 'ATR0807G048' => 'atr', 'ATR1091G084' => 'atr', 'Atru.chr10.1229' => 'acertr', 'Atru.chr10.1230' => 'acertr', 'Atru.chr10.1874' => 'acertr', 'Atru.chr11.1808' => 'acertr', 'Atru.chr13.1795' => 'acertr', 'Atru.chr13.570' => 'acertr', 'Atru.chr2.2608' => 'acertr', 'Atru.chr2.2609' => 'acertr', 'Atru.chr5.3428' => 'acertr', 'Atru.chr8.1171' => 'acertr', 'AUR62004651' => 'cqu', 'AUR62008675' => 'cqu', 'AUR62010014' => 'cqu', 'AUR62013004' => 'cqu', 'AUR62014825' => 'cqu', 'AUR62015015' => 'cqu', 'AUR62015151' => 'cqu', 'AUR62017020' => 'cqu', 'AUR62019422' => 'cqu', 'AUR62023570' => 'cqu', 'AUR62025571' => 'cqu', 'AUR62029098' => 'cqu', 'AUR62033863' => 'cqu', 'AUR62034296' => 'cqu', 'AUR62040075' => 'cqu', 'BcaB02g07334' => 'bca', 'BcaB02g10575' => 'bca', 'BcaB03g12119' => 'bca', 'BcaB03g12120' => 'bca', 'BcaB03g13945' => 'bca', 'BcaB04g17123' => 'bca', 'BcaB04g17867' => 'bca', 'BcaB04g19839' => 'bca', 'BcaB07g30317' => 'bca', 'BcaB07g32432' => 'bca', 'BcaB07g33362' => 'bca', 'BcaB08g36611' => 'bca', 'BcaC01g00028' => 'bca', 'BcaC01g01356' => 'bca', 'BcaC01g02034' => 'bca', 'BcaC01g06051' => 'bca', 'BcaC03g16839' => 'bca', 'BcaC03g17176' => 'bca', 'BcaC05g26829' => 'bca', 'BcaC06g31490' => 'bca', 'BcaC06g35344' => 'bca', 'BcaC06g36570' => 'bca', 'BcaC07g37537' => 'bca', 'BcaC08g43491' => 'bca', 'BcaC08g43773' => 'bca', 'BcaNung00234' => 'bca', 'BcaNung01982' => 'bca', 'BcaNung03707' => 'bca', 'BcaNung06454' => 'bca', 'BolC2t10762H' => 'bol', 'BolC2t11191H' => 'bol', 'BolC3t14322H' => 'bol', 'BolC3t19747H' => 'bol', 'BolC3t21425H' => 'bol', 'BolC4t27800H' => 'bol', 'BolC5t31423H' => 'bol', 'BolC6t35951H' => 'bol', 'BolC6t36282H' => 'bol', 'BolC7t40678H' => 'bol', 'BolC7t40679H' => 'bol', 'BolC7t42222H' => 'bol', 'BolC7t43492H' => 'bol', 'BolC7t46785H' => 'bol', 'BolC8t47853H' => 'bol', 'BolC9t56805H' => 'bol', 'BraA02t08000Z' => 'bra', 'BraA02t08341Z' => 'bra', 'BraA03t10936Z' => 'bra', 'BraA03t15657Z' => 'bra', 'BraA04t18100Z' => 'bra', 'BraA05t20523Z' => 'bra', 'BraA06t23353Z' => 'bra', 'BraA06t27473Z' => 'bra', 'BraA06t27769Z' => 'bra', 'BraA07t28928Z' => 'bra', 'BraA08t32236Z' => 'bra', 'BraA08t32841Z' => 'bra', 'BraA08t34524Z' => 'bra', 'BraA09t38742Z' => 'bra', 'BraA09t39295Z' => 'bra', 'C02p47180' => 'bna', 'C02p50990' => 'bna', 'C03p19360' => 'bna', 'C03p74950' => 'bna', 'C03p91000' => 'bna', 'C04p63260' => 'bna', 'C05p27050' => 'bna', 'C06p08750' => 'bna', 'C06p11490' => 'bna', 'C07p02820' => 'bna', 'C07p17180' => 'bna', 'C07p29440' => 'bna', 'C07p63730' => 'bna', 'C09p39260' => 'bna', 'CAN.G1164.34' => 'can', 'CAN.G1164.39' => 'can', 'CAN.G1530.3' => 'can', 'CAN.G162.61' => 'can', 'CAN.G176.6' => 'can', 'CAN.G289.49' => 'can', 'CAN.G370.21' => 'can', 'CAN.G370.22' => 'can', 'CAN.G371.117' => 'can', 'CAN.G58.37' => 'can', 'CAN.G588.98' => 'can', 'CANSAT21G2266' => 'cansat', 'CANSAT25G2799' => 'cansat', 'CANSAT35G0862' => 'cansat', 'CANSAT35G1704' => 'cansat', 'CANSAT35G1760' => 'cansat', 'CANSAT56G3971' => 'cansat', 'CANSAT56G4116' => 'cansat', 'CANSAT80G1259' => 'cansat', 'CARHR027730' => 'chi', 'CARHR033880' => 'chi', 'CARHR043270' => 'chi', 'CARHR145330' => 'chi', 'CARHR145340' => 'chi', 'CARHR175570' => 'chi', 'CARHR181570' => 'chi', 'CARHR258470' => 'chi', 'CARHR260490' => 'chi', 'CARHR294220' => 'chi', 'Carub.0001s2668' => 'cru', 'Carub.0001s3257' => 'cru', 'Carub.0001s4220' => 'cru', 'Carub.0005s0179' => 'cru', 'Carub.0006s2807' => 'cru', 'Carub.0007s0039' => 'cru', 'Carub.0008s0169' => 'cru', 'Carub.0008s0636' => 'cru', 'Ca_00338_v3' => 'car', 'Ca_00542_v3' => 'car', 'Ca_01844_v3' => 'car', 'Ca_10611_v3' => 'car', 'Ca_13326_v3' => 'car', 'Ca_17944_v3' => 'car', 'Ca_18546_v3' => 'car', 'Ca_24219_v3' => 'car', 'Ca_29972_v3' => 'car', 'CBR_g3681' => 'cbr', 'CBR_g40021' => 'cbr', 'Cc01_g08140' => 'ccan', 'Cc02_g13410' => 'ccan', 'Cc02_g37480' => 'ccan', 'Cc05_g12030' => 'ccan', 'Cc09_g03370' => 'ccan', 'Cc09_g10300' => 'ccan', 'Cc10_g03530' => 'ccan', 'Cc10_g11380' => 'ccan', 'CDE01G0176' => 'cde', 'CDE02G0675' => 'cde', 'CDE02G0942' => 'cde', 'CDE02G1153' => 'cde', 'CDE02G4177' => 'cde', 'CDE04G2117' => 'cde', 'CDE04G2736' => 'cde', 'CDE08G1161' => 'cde', 'CDE09G1238' => 'cde', 'Cfa000467' => 'cfa', 'Cfa000947' => 'cfa', 'Cfa004969' => 'cfa', 'Cfa005284' => 'cfa', 'Cfa008993' => 'cfa', 'Cfa018187' => 'cfa', 'Cfa018454' => 'cfa', 'Cfa020585' => 'cfa', 'Ciclev10000424m.g' => 'ccl', 'Ciclev10003605m.g' => 'ccl', 'Ciclev10007828m.g' => 'ccl', 'Ciclev10014620m.g' => 'ccl', 'Ciclev10015169m.g' => 'ccl', 'Ciclev10018291m.g' => 'ccl', 'Ciclev10028256m.g' => 'ccl', 'Ciclev10033822m.g' => 'ccl', 'CiPaw.05G060300' => 'cil', 'CiPaw.05G085000' => 'cil', 'CiPaw.06G083700' => 'cil', 'CiPaw.06G120300' => 'cil', 'CiPaw.09G060500' => 'cil', 'CiPaw.09G123800' => 'cil', 'CiPaw.11G169700' => 'cil', 'CiPaw.12G118300' => 'cil', 'CiPaw.15G071000' => 'cil', 'CiPaw.15G081900' => 'cil', 'ClCG01G024610' => 'cla', 'ClCG03G006070' => 'cla', 'ClCG05G019250' => 'cla', 'ClCG09G009500' => 'cla', 'ClCG11G008200' => 'cla', 'ClCG11G018080' => 'cla', 'COL.COLO4_17373' => 'col', 'COL.COLO4_22994' => 'col', 'COL.COLO4_26389' => 'col', 'COL.COLO4_27170' => 'col', 'COL.COLO4_31074' => 'col', 'COL.COLO4_31465' => 'col', 'COL.COLO4_36438' => 'col', 'COL.COLO4_36439' => 'col', 'Cpa.g.c38781' => 'cpa', 'Cpa.g.sc128.12' => 'cpa', 'Cpa.g.sc166.7' => 'cpa', 'Cpa.g.sc166.8' => 'cpa', 'Cpa.g.sc20.111' => 'cpa', 'Cpa.g.sc27.31' => 'cpa', 'Cpa.g.sc64.36' => 'cpa', 'Cpa.g.sc64.37' => 'cpa', 'Cpa.g.sc66.49' => 'cpa', 'Cpa.g.sc80.64' => 'cpa', 'CsaV3_1G012320' => 'csa', 'CsaV3_2G008480' => 'csa', 'CsaV3_2G033450' => 'csa', 'CsaV3_3G044830' => 'csa', 'CsaV3_4G033710' => 'csa', 'CsaV3_6G051730' => 'csa', 'CsaV3_7G025350' => 'csa', 'CSS0001067' => 'camsi', 'CSS0005996' => 'camsi', 'CSS0006590' => 'camsi', 'CSS0009673' => 'camsi', 'CSS0010201' => 'camsi', 'CSS0010549' => 'camsi', 'CSS0011364' => 'camsi', 'CSS0014473' => 'camsi', 'CSS0014961' => 'camsi', 'CSS0020191' => 'camsi', 'CSS0021165' => 'camsi', 'CSS0022306' => 'camsi', 'CSS0030591' => 'camsi', 'CSS0030696' => 'camsi', 'CSS0032653' => 'camsi', 'CSS0037487' => 'camsi', 'CSS0041102' => 'camsi', 'CSS0041261' => 'camsi', 'CSS0046246' => 'camsi', 'CSS0049256' => 'camsi', 'DCAR_004075' => 'dca', 'DCAR_011538' => 'dca', 'DCAR_019553' => 'dca', 'DCAR_020952' => 'dca', 'DCAR_021739' => 'dca', 'DCAR_027407' => 'dca', 'DCAR_027913' => 'dca', 'DCAR_028066' => 'dca', 'Dinv05899' => 'din', 'Dinv07563' => 'din', 'Dinv08010' => 'din', 'Dinv14125' => 'din', 'Dinv20172' => 'din', 'Dinv30743' => 'din', 'Dinv31229' => 'din', 'Dinv34162' => 'din', 'Dinv36028' => 'din', 'Dinv39368' => 'din', 'Dinv40565' => 'din', 'Dinv41706' => 'din', 'Duzib052G0089' => 'dzi', 'Duzib116G0641' => 'dzi', 'Duzib132G0069' => 'dzi', 'Duzib132G1219' => 'dzi', 'Duzib147G0278' => 'dzi', 'Duzib160G0480' => 'dzi', 'Duzib170G0661' => 'dzi', 'Duzib177G0591' => 'dzi', 'Duzib187G1353' => 'dzi', 'Duzib192G0858' => 'dzi', 'Duzib192G0883' => 'dzi', 'Duzib213G0506' => 'dzi', 'Duzib235G0289' => 'dzi', 'Duzib251G0422' => 'dzi', 'ECA232G3898' => 'eca', 'ECA233G5950' => 'eca', 'ECA234G1699' => 'eca', 'ECA234G2421' => 'eca', 'ECA236G0426' => 'eca', 'ECA236G4331' => 'eca', 'ECA248G2573' => 'eca', 'EL10Ac1g00077' => 'bvu', 'EL10Ac1g01746' => 'bvu', 'EL10Ac2g03464' => 'bvu', 'EL10Ac4g08176' => 'bvu', 'EL10Ac7g17521' => 'bvu', 'EL10Ac8g20386' => 'bvu', 'EL10Ac9g21343' => 'bvu', 'EL10Ac9g22688' => 'bvu', 'Eucgr.B03434' => 'egr', 'Eucgr.D00618' => 'egr', 'Eucgr.E02395' => 'egr', 'Eucgr.F01129' => 'egr', 'Eucgr.F02622' => 'egr', 'Eucgr.F04207' => 'egr', 'FAN01G0570' => 'fan', 'FAN03G3351' => 'fan', 'FAN06G3702' => 'fan', 'FAN07G2149' => 'fan', 'FAN10G3758' => 'fan', 'FAN11G1170' => 'fan', 'FAN11G2050' => 'fan', 'FAN11G2724' => 'fan', 'FAN12G1700' => 'fan', 'FAN12G2028' => 'fan', 'FAN15G1160' => 'fan', 'FAN15G3063' => 'fan', 'FAN16G2540' => 'fan', 'FAN16G3077' => 'fan', 'FAN16G3624' => 'fan', 'FAN17G0221' => 'fan', 'FAN20G2492' => 'fan', 'FAN20G2905' => 'fan', 'FAN21G0548' => 'fan', 'FAN21G1300' => 'fan', 'FAN22G0077' => 'fan', 'FAN22G1315' => 'fan', 'FAN24G1280' => 'fan', 'FAN24G1445' => 'fan', 'FAN24G3527' => 'fan', 'FAN25G0464' => 'fan', 'FAN25G2885' => 'fan', 'FAN25G3270' => 'fan', 'FAN27G1101' => 'fan', 'FAN27G2846' => 'fan', 'FAN27G3524' => 'fan', 'FvH4_2g11770' => 'fve', 'FvH4_2g15630' => 'fve', 'FvH4_3g05570' => 'fve', 'FvH4_3g09110' => 'fve', 'FvH4_3g19940' => 'fve', 'FvH4_4g04821' => 'fve', 'FvH4_4g31480' => 'fve', 'FvH4_7g01740' => 'fve', 'Glyma.05G130400' => 'gma', 'Glyma.05G156400' => 'gma', 'Glyma.07G197000' => 'gma', 'Glyma.08G085151' => 'gma', 'Glyma.08G114500' => 'gma', 'Glyma.08G300400' => 'gma', 'Glyma.10G215800' => 'gma', 'Glyma.12G224400' => 'gma', 'Glyma.13G179300' => 'gma', 'Glyma.13G218151' => 'gma', 'Glyma.13G238800' => 'gma', 'Glyma.13G276900' => 'gma', 'Glyma.14G078200' => 'gma', 'Glyma.15G074500' => 'gma', 'Glyma.15G094100' => 'gma', 'Glyma.17G247200' => 'gma', 'Glyma.18G120100' => 'gma', 'Glyma.20G176000' => 'gma', 'Gohir.A01G063600' => 'ghi', 'Gohir.A01G170301' => 'ghi', 'Gohir.A02G060500' => 'ghi', 'Gohir.A05G133850' => 'ghi', 'Gohir.A05G161400' => 'ghi', 'Gohir.A06G012900' => 'ghi', 'Gohir.A06G035901' => 'ghi', 'Gohir.A06G127100' => 'ghi', 'Gohir.A06G210500' => 'ghi', 'Gohir.A08G008650' => 'ghi', 'Gohir.A09G072700' => 'ghi', 'Gohir.A09G088301' => 'ghi', 'Gohir.A10G040600' => 'ghi', 'Gohir.A12G036300' => 'ghi', 'Gohir.A12G143350' => 'ghi', 'Gohir.A12G165500' => 'ghi', 'Gohir.A13G145700' => 'ghi', 'Gohir.D01G050000' => 'ghi', 'Gohir.D01G051366' => 'ghi', 'Gohir.D01G161350' => 'ghi', 'Gohir.D02G065900' => 'ghi', 'Gohir.D05G164200' => 'ghi', 'Gohir.D05G355500' => 'ghi', 'Gohir.D06G010400' => 'ghi', 'Gohir.D06G111250' => 'ghi', 'Gohir.D06G132000' => 'ghi', 'Gohir.D06G210500' => 'ghi', 'Gohir.D07G165675' => 'ghi', 'Gohir.D08G062240' => 'ghi', 'Gohir.D08G086101' => 'ghi', 'Gohir.D08G138060' => 'ghi', 'Gohir.D09G072300' => 'ghi', 'Gohir.D10G041400' => 'ghi', 'Gohir.D11G191020' => 'ghi', 'Gohir.D11G212066' => 'ghi', 'Gohir.D12G036300' => 'ghi', 'Gohir.D12G168600' => 'ghi', 'Gohir.D13G150600' => 'ghi', 'Gorai.001G057300' => 'gra', 'Gorai.002G069900' => 'gra', 'Gorai.002G200000' => 'gra', 'Gorai.003G067600' => 'gra', 'Gorai.005G074800' => 'gra', 'Gorai.006G087300' => 'gra', 'Gorai.008G037500' => 'gra', 'Gorai.008G181400' => 'gra', 'Gorai.009G169400' => 'gra', 'Gorai.009G387900' => 'gra', 'Gorai.010G013300' => 'gra', 'Gorai.010G153800' => 'gra', 'Gorai.010G255800' => 'gra', 'Gorai.011G043700' => 'gra', 'Gorai.011G198900' => 'gra', 'Gorai.013G168400' => 'gra', 'GSVIVG01005212001' => 'vvi', 'GSVIVG01006163001' => 'vvi', 'GSVIVG01009625001' => 'vvi', 'GSVIVG01014338001' => 'vvi', 'GSVIVG01020005001' => 'vvi', 'GSVIVG01021450001' => 'vvi', 'GSVIVG01023975001' => 'vvi', 'GSVIVG01034490001' => 'vvi', 'HanXRQChr04g0112071' => 'han', 'HanXRQChr05g0131151' => 'han', 'HanXRQChr09g0262371' => 'han', 'HanXRQChr09g0268401' => 'han', 'HanXRQChr10g0279241' => 'han', 'HanXRQChr10g0297961' => 'han', 'HanXRQChr11g0326231' => 'han', 'HanXRQChr11g0328471' => 'han', 'HanXRQChr16g0507941' => 'han', 'HanXRQChr17g0560211' => 'han', 'Haze_02108' => 'cav', 'Haze_02428' => 'cav', 'Haze_05593' => 'cav', 'Haze_06448' => 'cav', 'Haze_09427' => 'cav', 'Haze_12022' => 'cav', 'Haze_17612' => 'cav', 'Haze_17928' => 'cav', 'Hma1.2p1_0032F.1_g019250' => 'hma', 'Hma1.2p1_0163F.1_g072690' => 'hma', 'Hma1.2p1_0265F.1_g106710' => 'hma', 'Hma1.2p1_0286F.1_g113970' => 'hma', 'Hma1.2p1_0363F.1_g136640' => 'hma', 'Hma1.2p1_0584F.1_g183470' => 'hma', 'Hma1.2p1_0885F.1_g232570' => 'hma', 'HPP92_006022' => 'vpl', 'HPP92_007320' => 'vpl', 'HPP92_011521' => 'vpl', 'HPP92_019387' => 'vpl', 'HPP92_024038' => 'vpl', 'Hund05891' => 'sun', 'Hund06450' => 'sun', 'Hund12053' => 'sun', 'Hund16800' => 'sun', 'Hund21222' => 'sun', 'Hund22896' => 'sun', 'Hund23746' => 'sun', 'Hund27083' => 'sun', 'Lalb_Chr02g0141831' => 'lal', 'Lalb_Chr02g0141841' => 'lal', 'Lalb_Chr05g0220411' => 'lal', 'Lalb_Chr06g0162081' => 'lal', 'Lalb_Chr09g0327651' => 'lal', 'Lalb_Chr13g0295051' => 'lal', 'Lalb_Chr15g0086801' => 'lal', 'Lalb_Chr16g0383781' => 'lal', 'Lalb_Chr16g0383791' => 'lal', 'Lalb_Chr18g0055441' => 'lal', 'Lalb_Chr18g0059611' => 'lal', 'Lalb_Chr20g0109661' => 'lal', 'Lalb_Chr20g0109831' => 'lal', 'Lalb_Chr20g0121871' => 'lal', 'Lalb_Chr22g0355361' => 'lal', 'Lalb_Chr25g0286371' => 'lal', 'Lj1A1187G43' => 'lonja', 'Lj1A1205T50' => 'lonja', 'Lj1A800G33' => 'lonja', 'Lj1C1187T7' => 'lonja', 'Lj1C843T11' => 'lonja', 'Lj1g0010940' => 'lja', 'Lj2A288T69' => 'lonja', 'Lj3g0024276' => 'lja', 'Lj4A47T76' => 'lonja', 'Lj4g0005805' => 'lja', 'Lj4g0006097' => 'lja', 'Lj4g0008528' => 'lja', 'Lj4g0024907' => 'lja', 'Lj5g0012472' => 'lja', 'Lj5g0018648' => 'lja', 'Lj6C789G1' => 'lonja', 'Lj6g0004000' => 'lja', 'Lj7A292G67' => 'lonja', 'Lj7A292T64' => 'lonja', 'Lj9A400T58' => 'lonja', 'Lsat_1_v5_gn_1_126181' => 'lsa', 'Lsat_1_v5_gn_4_123041' => 'lsa', 'Lsat_1_v5_gn_4_133620' => 'lsa', 'Lsat_1_v5_gn_4_53221' => 'lsa', 'Lsat_1_v5_gn_4_71961' => 'lsa', 'Lsat_1_v5_gn_7_105241' => 'lsa', 'Lsat_1_v5_gn_7_21361' => 'lsa', 'Lsat_1_v5_gn_7_28860' => 'lsa', 'Lsat_1_v5_gn_7_31260' => 'lsa', 'Lsat_1_v5_gn_8_52801' => 'lsa', 'Manes.02G191400' => 'mes', 'Manes.03G110100' => 'mes', 'Manes.04G071100' => 'mes', 'Manes.05G100500' => 'mes', 'Manes.05G164700' => 'mes', 'Manes.15G087000' => 'mes', 'Manes.15G121500' => 'mes', 'Manes.16G028300' => 'mes', 'Manes.17G046100' => 'mes', 'Manes.17G069800' => 'mes', 'Manes.18G100500' => 'mes', 'Mapoly0002s0109' => 'mpo', 'Mapoly0024s0007' => 'mpo', 'Mapoly0089s0032' => 'mpo', 'MBI04_g42241_MAGBIO' => 'mbi', 'MBI05_g11988_MAGBIO' => 'mbi', 'MBI05_g35452_MAGBIO' => 'mbi', 'MBI07_g30179_MAGBIO' => 'mbi', 'MBI07_g35859_MAGBIO' => 'mbi', 'MBI07_g35860_MAGBIO' => 'mbi', 'MBI07_g37166_MAGBIO' => 'mbi', 'MBI08_g18172_MAGBIO' => 'mbi', 'MBI09_g08441_MAGBIO' => 'mbi', 'MBI13_g01676_MAGBIO' => 'mbi', 'MBI14_g42955_MAGBIO' => 'mbi', 'MBI16_g13161_MAGBIO' => 'mbi', 'MBI17_g27204_MAGBIO' => 'mbi', 'MBI19_g21595_MAGBIO' => 'mbi', 'MD00G1148400' => 'mdo', 'MD02G1301200' => 'mdo', 'MD03G1227800' => 'mdo', 'MD05G1041100' => 'mdo', 'MD05G1124800' => 'mdo', 'MD05G1284000' => 'mdo', 'MD05G1338800' => 'mdo', 'MD05G1338900' => 'mdo', 'MD07G1022800' => 'mdo', 'MD10G1047500' => 'mdo', 'MD10G1127500' => 'mdo', 'MD10G1262300' => 'mdo', 'MD10G1293800' => 'mdo', 'MD16G1074300' => 'mdo', 'Medtr1g021670' => 'mtr', 'Medtr1g096320' => 'mtr', 'Medtr2g013690' => 'mtr', 'Medtr2g019450' => 'mtr', 'Medtr2g085170' => 'mtr', 'Medtr4g088785' => 'mtr', 'Medtr8g055930' => 'mtr', 'Medtr8g085850' => 'mtr', 'MELO3C002605.2' => 'cme', 'MELO3C003891.2' => 'cme', 'MELO3C004012.2' => 'cme', 'MELO3C007134.2' => 'cme', 'MELO3C008118.2' => 'cme', 'MELO3C016700.2' => 'cme', 'MELO3C024127.2' => 'cme', 'MELO3C033361.2' => 'cme', 'MELO3C033362.2' => 'cme', 'Migut.C00430' => 'egut', 'Migut.C01246' => 'egut', 'Migut.E00101' => 'egut', 'Migut.H01486' => 'egut', 'Migut.H01939' => 'egut', 'Migut.K00360' => 'egut', 'Migut.M00910' => 'egut', 'Migut.M01139' => 'egut', 'Migut.N02677' => 'egut', 'MSTRG.13252' => 'ama', 'MSTRG.14701' => 'ama', 'MSTRG.1521' => 'ama', 'MSTRG.15884' => 'ama', 'MSTRG.16242' => 'ama', 'MSTRG.22285' => 'ama', 'MSTRG.22444' => 'ama', 'MSTRG.2349' => 'ama', 'MSTRG.26308' => 'ama', 'MSTRG.28296' => 'ama', 'MSTRG.9895' => 'ama', 'Nitab4.5_0000110g0060' => 'nta', 'Nitab4.5_0000420g0130' => 'nta', 'Nitab4.5_0000422g0030' => 'nta', 'Nitab4.5_0000560g0180' => 'nta', 'Nitab4.5_0000703g0100' => 'nta', 'Nitab4.5_0000786g0200' => 'nta', 'Nitab4.5_0001336g0020' => 'nta', 'Nitab4.5_0001796g0030' => 'nta', 'Nitab4.5_0003348g0060' => 'nta', 'Nitab4.5_0003698g0040' => 'nta', 'Nitab4.5_0003942g0090' => 'nta', 'Nitab4.5_0004775g0070' => 'nta', 'Nitab4.5_0004864g0030' => 'nta', 'Nitab4.5_0005615g0020' => 'nta', 'Nitab4.5_0009288g0030' => 'nta', 'Nitab4.5_0009341g0010' => 'nta', 'Nitab4.5_0009535g0010' => 'nta', 'Nn1g03995' => 'nnu', 'Nn1g04100' => 'nnu', 'Nn1g06530' => 'nnu', 'Nn3g16404' => 'nnu', 'Nn3g17212' => 'nnu', 'Nn3g20776' => 'nnu', 'Nn3g21923' => 'nnu', 'Nn5g27737' => 'nnu', 'Nn5g29461' => 'nnu', 'Nn7g38355' => 'nnu', 'Nn8g39873' => 'nnu', 'Oeu000548.2' => 'oeu', 'Oeu004672.1' => 'oeu', 'Oeu015605.2' => 'oeu', 'Oeu016092.1' => 'oeu', 'Oeu017879.3' => 'oeu', 'Oeu024910.1' => 'oeu', 'Oeu028965.1' => 'oeu', 'Oeu031269.1' => 'oeu', 'Oeu031270.1' => 'oeu', 'Oeu032535.1' => 'oeu', 'Oeu034151.1' => 'oeu', 'Oeu034152.1' => 'oeu', 'Oeu034588.2' => 'oeu', 'Oeu050846.1' => 'oeu', 'Oeu050849.2' => 'oeu', 'Oeu051063.2' => 'oeu', 'Oeu052368.1' => 'oeu', 'Oeu052370.1' => 'oeu', 'Os01g0210400' => 'osa', 'Os01g0304300' => 'osa', 'Os01g0749100' => 'osa', 'Os02g0745800' => 'osa', 'Os03g0769050' => 'osa', 'Os05g0531500' => 'osa', 'Os06g0724300' => 'osa', 'Os11g0198100' => 'osa', 'Peaxi162Scf00069g01425' => 'pax', 'Peaxi162Scf00280g00811' => 'pax', 'Peaxi162Scf00310g00615' => 'pax', 'Peaxi162Scf00362g00542' => 'pax', 'Peaxi162Scf00461g00310' => 'pax', 'Peaxi162Scf00530g00118' => 'pax', 'Peaxi162Scf00541g00057' => 'pax', 'Peaxi162Scf00661g00017' => 'pax', 'Peaxi162Scf00926g00027' => 'pax', 'Peaxi162Scf01064g00263' => 'pax', 'Peaxi162Scf01211g00135' => 'pax', 'PGR004G2336' => 'pgr', 'PGR042G0327' => 'pgr', 'PGR042G1957' => 'pgr', 'PGR042G2003' => 'pgr', 'PGR042G3929' => 'pgr', 'PGR083G1137' => 'pgr', 'PGR083G1364' => 'pgr', 'PGSC0003DMG400003381' => 'stu', 'PGSC0003DMG400003417' => 'stu', 'PGSC0003DMG400008981' => 'stu', 'PGSC0003DMG400012417' => 'stu', 'PGSC0003DMG400012823' => 'stu', 'PGSC0003DMG400016885' => 'stu', 'PGSC0003DMG400022812' => 'stu', 'PGSC0003DMG400029726' => 'stu', 'PGSC0003DMG401009243' => 'stu', 'PGSC0003DMG401031505' => 'stu', 'PGSC0003DMG402031505' => 'stu', 'Phvul.001G017600' => 'pvu', 'Phvul.002G193500' => 'pvu', 'Phvul.002G228900' => 'pvu', 'Phvul.002G236800' => 'pvu', 'Phvul.003G049500' => 'pvu', 'Phvul.005G072000' => 'pvu', 'Phvul.006G164800' => 'pvu', 'Phvul.006G185100' => 'pvu', 'Phvul.007G090000' => 'pvu', 'Potri.001G399800' => 'ptr', 'Potri.002G149900' => 'ptr', 'Potri.004G044100' => 'ptr', 'Potri.004G177600' => 'ptr', 'Potri.009G138000' => 'ptr', 'Potri.010G094000' => 'ptr', 'Potri.011G053000' => 'ptr', 'Potri.011G119300' => 'ptr', 'Potri.013G113700' => 'ptr', 'Potri.018G107800' => 'ptr', 'Potri.019G084100' => 'ptr', 'Pp3c14_23720' => 'ppa', 'Pp3c16_6340' => 'ppa', 'Pp3c23_13420' => 'ppa', 'Pp3c24_2740' => 'ppa', 'Pp3c25_860' => 'ppa', 'Pp3c8_21750' => 'ppa', 'Prupe.1G273000' => 'ppe', 'Prupe.1G273700' => 'ppe', 'Prupe.1G274100' => 'ppe', 'Prupe.2G023300' => 'ppe', 'Prupe.4G048000' => 'ppe', 'Prupe.4G080400' => 'ppe', 'Prupe.4G181200' => 'ppe', 'Prupe.8G056900' => 'ppe', 'Prupe.8G168700' => 'ppe', 'Psat1g189080' => 'psa', 'Psat1g204760' => 'psa', 'Psat4g175560' => 'psa', 'Psat4g177720' => 'psa', 'Psat5g244240' => 'psa', 'Psat6g010720' => 'psa', 'Psat6g187200' => 'psa', 'Psat7g072040' => 'psa', 'PSO017G3501' => 'pso', 'PSO063G2148' => 'pso', 'PSO063G5608' => 'pso', 'PSO210G6392' => 'pso', 'PSO541G2319' => 'pso', 'PSO541G2836' => 'pso', 'PSO541G4012' => 'pso', 'PSO541G6253' => 'pso', 'PSO675G0580' => 'pso', 'PSO675G0856' => 'pso', 'PSO675G5635' => 'pso', 'PSO675G9157' => 'pso', 'PSO832G1660' => 'pso', 'PSO832G1969' => 'pso', 'QL02p007186' => 'qlo', 'QL02p033904' => 'qlo', 'QL03p064391' => 'qlo', 'QL05p040593' => 'qlo', 'QL05p058242' => 'qlo', 'QL08p021825' => 'qlo', 'QL11p004981' => 'qlo', 'RcHm_v2.0_Chr1g0318301' => 'rch', 'RcHm_v2.0_Chr4g0418501' => 'rch', 'RcHm_v2.0_Chr4g0439971' => 'rch', 'RcHm_v2.0_Chr5g0008541' => 'rch', 'RcHm_v2.0_Chr5g0014101' => 'rch', 'RcHm_v2.0_Chr5g0014131' => 'rch', 'RcHm_v2.0_Chr5g0033621' => 'rch', 'RcHm_v2.0_Chr6g0272041' => 'rch', 'RcHm_v2.0_Chr6g0278831' => 'rch', 'Rhsim02G0130400' => 'rsi', 'Rhsim02G0171100' => 'rsi', 'Rhsim05G0053000' => 'rsi', 'Rhsim05G0053100' => 'rsi', 'Rhsim06G0096500' => 'rsi', 'Rhsim06G0096600' => 'rsi', 'Rhsim06G0199100' => 'rsi', 'Rhsim12G0062300' => 'rsi', 'Rhsim12G0062800' => 'rsi', 'Sabra02G0118600' => 'sbr', 'Sabra04G0027300' => 'sbr', 'Sabra04G0119500' => 'sbr', 'Sabra08G0112500' => 'sbr', 'Sabra11G0036800' => 'sbr', 'Sabra11G0103800' => 'sbr', 'Sabra13G0096300' => 'sbr', 'Sabra16G0262300' => 'sbr', 'Sabra18G0091700' => 'sbr', 'Sabra19G0095400' => 'sbr', 'SalBow6G3080' => 'sbo', 'SalBow7G1157' => 'sbo', 'SalBow7G2123' => 'sbo', 'SalBow7G2285' => 'sbo', 'SalBow7G3537' => 'sbo', 'SalBow8G2947' => 'sbo', 'SalBow8G4463' => 'sbo', 'SalBow8G5466' => 'sbo', 'Sc01g0001750' => 'sci', 'Sc02g0006640' => 'sci', 'Sc02g0006670' => 'sci', 'Sc04g0008220' => 'sci', 'Sc05g0006190' => 'sci', 'Sc08g0002760' => 'sci', 'Sc17g0006170' => 'sci', 'Sc22g0002050' => 'sci', 'Sc23g0001190' => 'sci', 'Sc24g0000980' => 'sci', 'Sed0006245' => 'sed', 'Sed0007543' => 'sed', 'Sed0009411' => 'sed', 'Sed0010765' => 'sed', 'Sed0012944' => 'sed', 'Sed0014682' => 'sed', 'Sed0016174' => 'sed', 'Sed0016796' => 'sed', 'Sed0020317' => 'sed', 'Sed0021467' => 'sed', 'SEGI_01316' => 'sgi', 'SEGI_03374' => 'sgi', 'SEGI_16265' => 'sgi', 'SEGI_18569' => 'sgi', 'SEGI_20351' => 'sgi', 'SEGI_26395' => 'sgi', 'SEGI_29469' => 'sgi', 'SEGI_34771' => 'sgi', 'SEGI_36769' => 'sgi', 'SEGI_37139' => 'sgi', 'SGA_v2.0_scaffold100G29687' => 'sas', 'SGA_v2.0_scaffold118G32472' => 'sas', 'SGA_v2.0_scaffold14G07051' => 'sas', 'SGA_v2.0_scaffold183G39845' => 'sas', 'SGA_v2.0_scaffold1G00174' => 'sas', 'SGA_v2.0_scaffold22G09714' => 'sas', 'SGA_v2.0_scaffold333G48992' => 'sas', 'SGA_v2.0_scaffold46G17491' => 'sas', 'SGA_v2.0_scaffold49G18294' => 'sas', 'SGA_v2.0_scaffold63G21658' => 'sas', 'SHI01741' => 'shi', 'SHI05771' => 'shi', 'SHI18077' => 'shi', 'SHI20525' => 'shi', 'SHI20527' => 'shi', 'SHI20528' => 'shi', 'SMO172G0185' => 'smo', 'SMO198G0020' => 'smo', 'SMO351G0006' => 'smo', 'SMO356G0118' => 'smo', 'SMO358G0296' => 'smo', 'SMO367G0079' => 'smo', 'SMO367G1277' => 'smo', 'Solyc01g014220.3' => 'sly', 'Solyc01g111770.2' => 'sly', 'Solyc02g078180.3' => 'sly', 'Solyc03g006430.3' => 'sly', 'Solyc03g006456.1' => 'sly', 'Solyc03g079860.2' => 'sly', 'Solyc04g079770.3' => 'sly', 'Solyc05g007430.4' => 'sly', 'Solyc07g063150.3' => 'sly', 'Solyc08g016620.3' => 'sly', 'Solyc09g057590.3' => 'sly', 'Solyc09g057600.1' => 'sly', 'Solyc10g009050.3' => 'sly', 'Solyc11g017420.2' => 'sly', 'Sopen01g053810' => 'spe', 'Sopen02g023040' => 'spe', 'Sopen03g002440' => 'spe', 'Sopen04g033350' => 'spe', 'Sopen05g003310' => 'spe', 'Sopen07g004050' => 'spe', 'Sopen07g031340' => 'spe', 'Sopen08g006990' => 'spe', 'Sopen10g004830' => 'spe', 'Sopen11g009370' => 'spe', 'Sp1g24450' => 'spa', 'Sp1g29670' => 'spa', 'Sp1g39600' => 'spa', 'Sp2g11080' => 'spa', 'Sp2g13970' => 'spa', 'Sp4g16130' => 'spa', 'Sp6g13080' => 'spa', 'Sp7g37270' => 'spa', 'TAR371G0065' => 'tar', 'TAR376G0340' => 'tar', 'TAR376G0435' => 'tar', 'TAR381G0002' => 'tar', 'TAR381G1236' => 'tar', 'TAR624G0055' => 'tar', 'TAR624G0324' => 'tar', 'TAR624G0696' => 'tar', 'TAR624G0906' => 'tar', 'TAR625G0107' => 'tar', 'TAR626G0015' => 'tar', 'TAR626G1356' => 'tar', 'TAR627G0888' => 'tar', 'TAR628G0399' => 'tar', 'TAR628G1327' => 'tar', 'TAR629G2831' => 'tar', 'TAR629G2874' => 'tar', 'TAR633G1432' => 'tar', 'TAR633G2771' => 'tar', 'THA.LOC104803394' => 'tha', 'THA.LOC104805153' => 'tha', 'THA.LOC104806784' => 'tha', 'THA.LOC104810473' => 'tha', 'THA.LOC104813100' => 'tha', 'THA.LOC104814215' => 'tha', 'THA.LOC104815554' => 'tha', 'THA.LOC104820544' => 'tha', 'THA.LOC104824754' => 'tha', 'THA.LOC104827717' => 'tha', 'Thecc.02G031400' => 'tca', 'Thecc.02G055900' => 'tca', 'Thecc.02G350800' => 'tca', 'Thecc.06G150900' => 'tca', 'Thecc.06G186600' => 'tca', 'Thecc.07G089600' => 'tca', 'Thecc.08G020400' => 'tca', 'Thecc.08G182100' => 'tca', 'Thhalv10000873m.g' => 'esa', 'Thhalv10004185m.g' => 'esa', 'Thhalv10006981m.g' => 'esa', 'Thhalv10007204m.g' => 'esa', 'Thhalv10011374m.g' => 'esa', 'Thhalv10013482m.g' => 'esa', 'Thhalv10017801m.g' => 'esa', 'Thhalv10024983m.g' => 'esa', 'TPR.G12072' => 'tpr', 'TPR.G15769' => 'tpr', 'TPR.G16504' => 'tpr', 'TPR.G16506' => 'tpr', 'TPR.G24345' => 'tpr', 'TPR.G26666' => 'tpr', 'TPR.G27320' => 'tpr', 'TPR.G31819' => 'tpr', 'TPR.G38879' => 'tpr', 'TPR.G39015' => 'tpr', 'TPR.G8819' => 'tpr', 'TWI09G0924' => 'twi', 'TWI12G0811' => 'twi', 'TWI12G1294' => 'twi', 'TWI31G0150' => 'twi', 'TWI36G1262' => 'twi', 'TWI38G1287' => 'twi', 'TWI38G1633' => 'twi', 'TWI38G1982' => 'twi', 'TWI39G0116' => 'twi', 'TWI60G1011' => 'twi', 'TWI63G0171' => 'twi', 'TWI73G0839' => 'twi', 'TWI79G1511' => 'twi', 'unitig_0.g915' => 'ugi', 'unitig_0.g916' => 'ugi', 'unitig_21.g20219' => 'ugi', 'unitig_21.g20416' => 'ugi', 'unitig_578.g16132' => 'ugi', 'unitig_578.g16718' => 'ugi', 'unitig_62.g23481' => 'ugi', 'unitig_744.g24535' => 'ugi', 'unitig_749.g13525' => 'ugi', 'vmacro01248' => 'vma', 'vmacro02290' => 'vma', 'vmacro10946' => 'vma', 'vmacro11865' => 'vma', 'vmacro12493' => 'vma', 'vmacro17322' => 'vma', 'vmacro21599' => 'vma', 'vmacro23041' => 'vma', 'VMungo0251G0004' => 'vmu', 'VMungo0251G2639' => 'vmu', 'VMungo0251G2967' => 'vmu', 'VMungo0540G0864' => 'vmu', 'VMungo0540G1569' => 'vmu', 'VMungo0647G0317' => 'vmu', 'VMungo0720G1373' => 'vmu', 'VMungo0720G1508' => 'vmu', 'VMungo1080G0485' => 'vmu', 'VMungo1215G3177' => 'vmu', 'Zm00001eb112600' => 'zma', 'Zm00001eb120220' => 'zma', 'Zm00001eb153240' => 'zma', 'Zm00001eb168880' => 'zma', 'Zm00001eb213920' => 'zma', 'Zm00001eb228280' => 'zma', 'Zm00001eb254580' => 'zma', 'Zm00001eb272180' => 'zma', 'Zm00001eb293190' => 'zma', 'Zm00001eb322930' => 'zma', 'Zm00001eb353360' => 'zma', 'Zm00001eb353390' => 'zma', 'Zm00001eb353430' => 'zma', 'Zm00001eb353440' => 'zma', 'Zm00001eb353780' => 'zma' ), 'gf_id' => 'HOM05D000499', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000499' ), 'data_identifier' => 'HOM05D000499', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000499', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1066', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p29780' => 'bna', 'A02p33180' => 'bna', 'A03p16470' => 'bna', 'A03p66010' => 'bna', 'A04p25970' => 'bna', 'A06p01270' => 'bna', 'A06p46080' => 'bna', 'A07p11400' => 'bna', 'A08p01840' => 'bna', 'A08p08230' => 'bna', 'A08p25740' => 'bna', 'A09p32070' => 'bna', 'A09p37830' => 'bna', 'A09p42840' => 'bna', 'A09p42850' => 'bna', 'Aa31LG10G2060' => 'aar', 'Aa31LG2G7410' => 'aar', 'Aa31LG6G10200' => 'aar', 'Aa31LG6G16680' => 'aar', 'Aa31LG6G8470' => 'aar', 'Aa31LG9G12730' => 'aar', 'Aa31LG9G13680' => 'aar', 'Aa31LG9G14920' => 'aar', 'Aa31LG9G6650' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4977' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5467' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3254' => 'aag', 'Actinidia02578' => 'ach', 'Actinidia07693' => 'ach', 'Actinidia08413' => 'ach', 'Actinidia08414' => 'ach', 'Actinidia15289' => 'ach', 'Actinidia19871' => 'ach', 'Actinidia21475' => 'ach', 'Actinidia22576' => 'ach', 'Actinidia28327' => 'ach', 'Actinidia32491' => 'ach', 'Actinidia39463' => 'ach', 'Actinidia39571' => 'ach', 'Ah.01g013750' => 'amhyb', 'Ah.01g023210' => 'amhyb', 'Ah.04g164850' => 'amhyb', 'Ah.05g178060' => 'amhyb', 'Ah.07g204270' => 'amhyb', 'Ah.07g208480' => 'amhyb', 'Ah.09g237410' => 'amhyb', 'Ah.14g089460' => 'amhyb', 'AL1G41790' => 'aly', 'AL1G49050' => 'aly', 'AL1G53810' => 'aly', 'AL1G61400' => 'aly', 'AL4G18580' => 'aly', 'AL5G12510' => 'aly', 'AL5G12540' => 'aly', 'AL6G43230' => 'aly', 'AL7G10370' => 'aly', 'AL7G19250' => 'aly', 'AL8G12240' => 'aly', 'AL8G18540' => 'aly', 'Aqoxy1G02409' => 'aox', 'Aqoxy2G03993' => 'aox', 'Aqoxy3G03357' => 'aox', 'Aqoxy4G00785' => 'aox', 'Aqoxy5G02598' => 'aox', 'Aqoxy6G00132' => 'aox', 'Aqoxy7G01776' => 'aox', 'Aqoxy7G02316' => 'aox', 'Aqoxy7G03973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.12AFKW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B8730' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27IQR1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3F75VG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3RE0GA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41TCQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.527VTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FIR39' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5W8UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DA38EV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ63HS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H1I32C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HC27T5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4M8AP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7N3CZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9UVDZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LS1NQA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT1D4B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SKC4TM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCFV76' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF9Q1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQWD9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1ZM88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WE07RT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YCK7VH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJE6Q6' => 'arhy', 'AT1G28240' => 'ath', 'AT1G34550' => 'ath', 'AT1G53040' => 'ath', 'AT2G02910' => 'ath', 'AT4G09630' => 'ath', 'AT4G38500' => 'ath', 'AT5G42660' => 'ath', 'AT5G46220' => 'ath', 'ATR0152G026' => 'atr', 'ATR0564G343' => 'atr', 'ATR0706G151' => 'atr', 'ATR0733G207' => 'atr', 'ATR0751G234' => 'atr', 'ATR0807G048' => 'atr', 'ATR1091G084' => 'atr', 'Atru.chr10.1229' => 'acertr', 'Atru.chr10.1230' => 'acertr', 'Atru.chr10.1874' => 'acertr', 'Atru.chr11.1808' => 'acertr', 'Atru.chr13.1795' => 'acertr', 'Atru.chr13.570' => 'acertr', 'Atru.chr2.2608' => 'acertr', 'Atru.chr2.2609' => 'acertr', 'Atru.chr5.3428' => 'acertr', 'Atru.chr8.1171' => 'acertr', 'AUR62004651' => 'cqu', 'AUR62008675' => 'cqu', 'AUR62010014' => 'cqu', 'AUR62013004' => 'cqu', 'AUR62014825' => 'cqu', 'AUR62015015' => 'cqu', 'AUR62015151' => 'cqu', 'AUR62017020' => 'cqu', 'AUR62019422' => 'cqu', 'AUR62023570' => 'cqu', 'AUR62025571' => 'cqu', 'AUR62029098' => 'cqu', 'AUR62033863' => 'cqu', 'AUR62034296' => 'cqu', 'AUR62040075' => 'cqu', 'BcaB02g07334' => 'bca', 'BcaB02g10575' => 'bca', 'BcaB03g12119' => 'bca', 'BcaB03g12120' => 'bca', 'BcaB03g13945' => 'bca', 'BcaB04g17123' => 'bca', 'BcaB04g17867' => 'bca', 'BcaB04g19839' => 'bca', 'BcaB07g30317' => 'bca', 'BcaB07g32432' => 'bca', 'BcaB07g33362' => 'bca', 'BcaB08g36611' => 'bca', 'BcaC01g00028' => 'bca', 'BcaC01g01356' => 'bca', 'BcaC01g02034' => 'bca', 'BcaC01g06051' => 'bca', 'BcaC03g16839' => 'bca', 'BcaC03g17176' => 'bca', 'BcaC05g26829' => 'bca', 'BcaC06g31490' => 'bca', 'BcaC06g35344' => 'bca', 'BcaC06g36570' => 'bca', 'BcaC07g37537' => 'bca', 'BcaC08g43491' => 'bca', 'BcaC08g43773' => 'bca', 'BcaNung00234' => 'bca', 'BcaNung01982' => 'bca', 'BcaNung03707' => 'bca', 'BcaNung06454' => 'bca', 'BolC2t10762H' => 'bol', 'BolC2t11191H' => 'bol', 'BolC3t14322H' => 'bol', 'BolC3t19747H' => 'bol', 'BolC3t21425H' => 'bol', 'BolC4t27800H' => 'bol', 'BolC5t31423H' => 'bol', 'BolC6t35951H' => 'bol', 'BolC6t36282H' => 'bol', 'BolC7t40678H' => 'bol', 'BolC7t40679H' => 'bol', 'BolC7t42222H' => 'bol', 'BolC7t43492H' => 'bol', 'BolC7t46785H' => 'bol', 'BolC8t47853H' => 'bol', 'BolC9t56805H' => 'bol', 'BraA02t08000Z' => 'bra', 'BraA02t08341Z' => 'bra', 'BraA03t10936Z' => 'bra', 'BraA03t15657Z' => 'bra', 'BraA04t18100Z' => 'bra', 'BraA05t20523Z' => 'bra', 'BraA06t23353Z' => 'bra', 'BraA06t27473Z' => 'bra', 'BraA06t27769Z' => 'bra', 'BraA07t28928Z' => 'bra', 'BraA08t32236Z' => 'bra', 'BraA08t32841Z' => 'bra', 'BraA08t34524Z' => 'bra', 'BraA09t38742Z' => 'bra', 'BraA09t39295Z' => 'bra', 'C02p47180' => 'bna', 'C02p50990' => 'bna', 'C03p19360' => 'bna', 'C03p74950' => 'bna', 'C03p91000' => 'bna', 'C04p63260' => 'bna', 'C05p27050' => 'bna', 'C06p08750' => 'bna', 'C06p11490' => 'bna', 'C07p02820' => 'bna', 'C07p17180' => 'bna', 'C07p29440' => 'bna', 'C07p63730' => 'bna', 'C09p39260' => 'bna', 'CAN.G1164.34' => 'can', 'CAN.G1164.39' => 'can', 'CAN.G1530.3' => 'can', 'CAN.G162.61' => 'can', 'CAN.G176.6' => 'can', 'CAN.G289.49' => 'can', 'CAN.G370.21' => 'can', 'CAN.G370.22' => 'can', 'CAN.G371.117' => 'can', 'CAN.G58.37' => 'can', 'CAN.G588.98' => 'can', 'CANSAT21G2266' => 'cansat', 'CANSAT25G2799' => 'cansat', 'CANSAT35G0862' => 'cansat', 'CANSAT35G1704' => 'cansat', 'CANSAT35G1760' => 'cansat', 'CANSAT56G3971' => 'cansat', 'CANSAT56G4116' => 'cansat', 'CANSAT80G1259' => 'cansat', 'CARHR027730' => 'chi', 'CARHR033880' => 'chi', 'CARHR043270' => 'chi', 'CARHR145330' => 'chi', 'CARHR145340' => 'chi', 'CARHR175570' => 'chi', 'CARHR181570' => 'chi', 'CARHR258470' => 'chi', 'CARHR260490' => 'chi', 'CARHR294220' => 'chi', 'Carub.0001s2668' => 'cru', 'Carub.0001s3257' => 'cru', 'Carub.0001s4220' => 'cru', 'Carub.0005s0179' => 'cru', 'Carub.0006s2807' => 'cru', 'Carub.0007s0039' => 'cru', 'Carub.0008s0169' => 'cru', 'Carub.0008s0636' => 'cru', 'Ca_00338_v3' => 'car', 'Ca_00542_v3' => 'car', 'Ca_01844_v3' => 'car', 'Ca_10611_v3' => 'car', 'Ca_13326_v3' => 'car', 'Ca_17944_v3' => 'car', 'Ca_18546_v3' => 'car', 'Ca_24219_v3' => 'car', 'Ca_29972_v3' => 'car', 'CBR_g3681' => 'cbr', 'CBR_g40021' => 'cbr', 'Cc01_g08140' => 'ccan', 'Cc02_g13410' => 'ccan', 'Cc02_g37480' => 'ccan', 'Cc05_g12030' => 'ccan', 'Cc09_g03370' => 'ccan', 'Cc09_g10300' => 'ccan', 'Cc10_g03530' => 'ccan', 'Cc10_g11380' => 'ccan', 'CDE01G0176' => 'cde', 'CDE02G0675' => 'cde', 'CDE02G0942' => 'cde', 'CDE02G1153' => 'cde', 'CDE02G4177' => 'cde', 'CDE04G2117' => 'cde', 'CDE04G2736' => 'cde', 'CDE08G1161' => 'cde', 'CDE09G1238' => 'cde', 'Cfa000467' => 'cfa', 'Cfa000947' => 'cfa', 'Cfa004969' => 'cfa', 'Cfa005284' => 'cfa', 'Cfa008993' => 'cfa', 'Cfa018187' => 'cfa', 'Cfa018454' => 'cfa', 'Cfa020585' => 'cfa', 'Ciclev10000424m.g' => 'ccl', 'Ciclev10003605m.g' => 'ccl', 'Ciclev10007828m.g' => 'ccl', 'Ciclev10014620m.g' => 'ccl', 'Ciclev10015169m.g' => 'ccl', 'Ciclev10018291m.g' => 'ccl', 'Ciclev10028256m.g' => 'ccl', 'Ciclev10033822m.g' => 'ccl', 'CiPaw.05G060300' => 'cil', 'CiPaw.05G085000' => 'cil', 'CiPaw.06G083700' => 'cil', 'CiPaw.06G120300' => 'cil', 'CiPaw.09G060500' => 'cil', 'CiPaw.09G123800' => 'cil', 'CiPaw.11G169700' => 'cil', 'CiPaw.12G118300' => 'cil', 'CiPaw.15G071000' => 'cil', 'CiPaw.15G081900' => 'cil', 'ClCG01G024610' => 'cla', 'ClCG03G006070' => 'cla', 'ClCG05G019250' => 'cla', 'ClCG09G009500' => 'cla', 'ClCG11G008200' => 'cla', 'ClCG11G018080' => 'cla', 'COL.COLO4_17373' => 'col', 'COL.COLO4_22994' => 'col', 'COL.COLO4_26389' => 'col', 'COL.COLO4_27170' => 'col', 'COL.COLO4_31074' => 'col', 'COL.COLO4_31465' => 'col', 'COL.COLO4_36438' => 'col', 'COL.COLO4_36439' => 'col', 'Cpa.g.c38781' => 'cpa', 'Cpa.g.sc128.12' => 'cpa', 'Cpa.g.sc166.7' => 'cpa', 'Cpa.g.sc166.8' => 'cpa', 'Cpa.g.sc20.111' => 'cpa', 'Cpa.g.sc27.31' => 'cpa', 'Cpa.g.sc64.36' => 'cpa', 'Cpa.g.sc64.37' => 'cpa', 'Cpa.g.sc66.49' => 'cpa', 'Cpa.g.sc80.64' => 'cpa', 'CsaV3_1G012320' => 'csa', 'CsaV3_2G008480' => 'csa', 'CsaV3_2G033450' => 'csa', 'CsaV3_3G044830' => 'csa', 'CsaV3_4G033710' => 'csa', 'CsaV3_6G051730' => 'csa', 'CsaV3_7G025350' => 'csa', 'CSS0001067' => 'camsi', 'CSS0005996' => 'camsi', 'CSS0006590' => 'camsi', 'CSS0009673' => 'camsi', 'CSS0010201' => 'camsi', 'CSS0010549' => 'camsi', 'CSS0011364' => 'camsi', 'CSS0014473' => 'camsi', 'CSS0014961' => 'camsi', 'CSS0020191' => 'camsi', 'CSS0021165' => 'camsi', 'CSS0022306' => 'camsi', 'CSS0030591' => 'camsi', 'CSS0030696' => 'camsi', 'CSS0032653' => 'camsi', 'CSS0037487' => 'camsi', 'CSS0041102' => 'camsi', 'CSS0041261' => 'camsi', 'CSS0046246' => 'camsi', 'CSS0049256' => 'camsi', 'DCAR_004075' => 'dca', 'DCAR_011538' => 'dca', 'DCAR_019553' => 'dca', 'DCAR_020952' => 'dca', 'DCAR_021739' => 'dca', 'DCAR_027407' => 'dca', 'DCAR_027913' => 'dca', 'DCAR_028066' => 'dca', 'Dinv05899' => 'din', 'Dinv07563' => 'din', 'Dinv08010' => 'din', 'Dinv14125' => 'din', 'Dinv20172' => 'din', 'Dinv30743' => 'din', 'Dinv31229' => 'din', 'Dinv34162' => 'din', 'Dinv36028' => 'din', 'Dinv39368' => 'din', 'Dinv40565' => 'din', 'Dinv41706' => 'din', 'Duzib052G0089' => 'dzi', 'Duzib116G0641' => 'dzi', 'Duzib132G0069' => 'dzi', 'Duzib132G1219' => 'dzi', 'Duzib147G0278' => 'dzi', 'Duzib160G0480' => 'dzi', 'Duzib170G0661' => 'dzi', 'Duzib177G0591' => 'dzi', 'Duzib187G1353' => 'dzi', 'Duzib192G0858' => 'dzi', 'Duzib192G0883' => 'dzi', 'Duzib213G0506' => 'dzi', 'Duzib235G0289' => 'dzi', 'Duzib251G0422' => 'dzi', 'ECA232G3898' => 'eca', 'ECA233G5950' => 'eca', 'ECA234G1699' => 'eca', 'ECA234G2421' => 'eca', 'ECA236G0426' => 'eca', 'ECA236G4331' => 'eca', 'ECA248G2573' => 'eca', 'EL10Ac1g00077' => 'bvu', 'EL10Ac1g01746' => 'bvu', 'EL10Ac2g03464' => 'bvu', 'EL10Ac4g08176' => 'bvu', 'EL10Ac7g17521' => 'bvu', 'EL10Ac8g20386' => 'bvu', 'EL10Ac9g21343' => 'bvu', 'EL10Ac9g22688' => 'bvu', 'Eucgr.B03434' => 'egr', 'Eucgr.D00618' => 'egr', 'Eucgr.E02395' => 'egr', 'Eucgr.F01129' => 'egr', 'Eucgr.F02622' => 'egr', 'Eucgr.F04207' => 'egr', 'FAN01G0570' => 'fan', 'FAN03G3351' => 'fan', 'FAN06G3702' => 'fan', 'FAN07G2149' => 'fan', 'FAN10G3758' => 'fan', 'FAN11G1170' => 'fan', 'FAN11G2050' => 'fan', 'FAN11G2724' => 'fan', 'FAN12G1700' => 'fan', 'FAN12G2028' => 'fan', 'FAN15G1160' => 'fan', 'FAN15G3063' => 'fan', 'FAN16G2540' => 'fan', 'FAN16G3077' => 'fan', 'FAN16G3624' => 'fan', 'FAN17G0221' => 'fan', 'FAN20G2492' => 'fan', 'FAN20G2905' => 'fan', 'FAN21G0548' => 'fan', 'FAN21G1300' => 'fan', 'FAN22G0077' => 'fan', 'FAN22G1315' => 'fan', 'FAN24G1280' => 'fan', 'FAN24G1445' => 'fan', 'FAN24G3527' => 'fan', 'FAN25G0464' => 'fan', 'FAN25G2885' => 'fan', 'FAN25G3270' => 'fan', 'FAN27G1101' => 'fan', 'FAN27G2846' => 'fan', 'FAN27G3524' => 'fan', 'FvH4_2g11770' => 'fve', 'FvH4_2g15630' => 'fve', 'FvH4_3g05570' => 'fve', 'FvH4_3g09110' => 'fve', 'FvH4_3g19940' => 'fve', 'FvH4_4g04821' => 'fve', 'FvH4_4g31480' => 'fve', 'FvH4_7g01740' => 'fve', 'Glyma.05G130400' => 'gma', 'Glyma.05G156400' => 'gma', 'Glyma.07G197000' => 'gma', 'Glyma.08G085151' => 'gma', 'Glyma.08G114500' => 'gma', 'Glyma.08G300400' => 'gma', 'Glyma.10G215800' => 'gma', 'Glyma.12G224400' => 'gma', 'Glyma.13G179300' => 'gma', 'Glyma.13G218151' => 'gma', 'Glyma.13G238800' => 'gma', 'Glyma.13G276900' => 'gma', 'Glyma.14G078200' => 'gma', 'Glyma.15G074500' => 'gma', 'Glyma.15G094100' => 'gma', 'Glyma.17G247200' => 'gma', 'Glyma.18G120100' => 'gma', 'Glyma.20G176000' => 'gma', 'Gohir.A01G063600' => 'ghi', 'Gohir.A01G170301' => 'ghi', 'Gohir.A02G060500' => 'ghi', 'Gohir.A05G133850' => 'ghi', 'Gohir.A05G161400' => 'ghi', 'Gohir.A06G012900' => 'ghi', 'Gohir.A06G035901' => 'ghi', 'Gohir.A06G127100' => 'ghi', 'Gohir.A06G210500' => 'ghi', 'Gohir.A08G008650' => 'ghi', 'Gohir.A09G072700' => 'ghi', 'Gohir.A09G088301' => 'ghi', 'Gohir.A10G040600' => 'ghi', 'Gohir.A12G036300' => 'ghi', 'Gohir.A12G143350' => 'ghi', 'Gohir.A12G165500' => 'ghi', 'Gohir.A13G145700' => 'ghi', 'Gohir.D01G050000' => 'ghi', 'Gohir.D01G051366' => 'ghi', 'Gohir.D01G161350' => 'ghi', 'Gohir.D02G065900' => 'ghi', 'Gohir.D05G164200' => 'ghi', 'Gohir.D05G355500' => 'ghi', 'Gohir.D06G010400' => 'ghi', 'Gohir.D06G111250' => 'ghi', 'Gohir.D06G132000' => 'ghi', 'Gohir.D06G210500' => 'ghi', 'Gohir.D07G165675' => 'ghi', 'Gohir.D08G062240' => 'ghi', 'Gohir.D08G086101' => 'ghi', 'Gohir.D08G138060' => 'ghi', 'Gohir.D09G072300' => 'ghi', 'Gohir.D10G041400' => 'ghi', 'Gohir.D11G191020' => 'ghi', 'Gohir.D11G212066' => 'ghi', 'Gohir.D12G036300' => 'ghi', 'Gohir.D12G168600' => 'ghi', 'Gohir.D13G150600' => 'ghi', 'Gorai.001G057300' => 'gra', 'Gorai.002G069900' => 'gra', 'Gorai.002G200000' => 'gra', 'Gorai.003G067600' => 'gra', 'Gorai.005G074800' => 'gra', 'Gorai.006G087300' => 'gra', 'Gorai.008G037500' => 'gra', 'Gorai.008G181400' => 'gra', 'Gorai.009G169400' => 'gra', 'Gorai.009G387900' => 'gra', 'Gorai.010G013300' => 'gra', 'Gorai.010G153800' => 'gra', 'Gorai.010G255800' => 'gra', 'Gorai.011G043700' => 'gra', 'Gorai.011G198900' => 'gra', 'Gorai.013G168400' => 'gra', 'GSVIVG01005212001' => 'vvi', 'GSVIVG01006163001' => 'vvi', 'GSVIVG01009625001' => 'vvi', 'GSVIVG01014338001' => 'vvi', 'GSVIVG01020005001' => 'vvi', 'GSVIVG01021450001' => 'vvi', 'GSVIVG01023975001' => 'vvi', 'GSVIVG01034490001' => 'vvi', 'HanXRQChr04g0112071' => 'han', 'HanXRQChr05g0131151' => 'han', 'HanXRQChr09g0262371' => 'han', 'HanXRQChr09g0268401' => 'han', 'HanXRQChr10g0279241' => 'han', 'HanXRQChr10g0297961' => 'han', 'HanXRQChr11g0326231' => 'han', 'HanXRQChr11g0328471' => 'han', 'HanXRQChr16g0507941' => 'han', 'HanXRQChr17g0560211' => 'han', 'Haze_02108' => 'cav', 'Haze_02428' => 'cav', 'Haze_05593' => 'cav', 'Haze_06448' => 'cav', 'Haze_09427' => 'cav', 'Haze_12022' => 'cav', 'Haze_17612' => 'cav', 'Haze_17928' => 'cav', 'Hma1.2p1_0032F.1_g019250' => 'hma', 'Hma1.2p1_0163F.1_g072690' => 'hma', 'Hma1.2p1_0265F.1_g106710' => 'hma', 'Hma1.2p1_0286F.1_g113970' => 'hma', 'Hma1.2p1_0363F.1_g136640' => 'hma', 'Hma1.2p1_0584F.1_g183470' => 'hma', 'Hma1.2p1_0885F.1_g232570' => 'hma', 'HPP92_006022' => 'vpl', 'HPP92_007320' => 'vpl', 'HPP92_011521' => 'vpl', 'HPP92_019387' => 'vpl', 'HPP92_024038' => 'vpl', 'Hund05891' => 'sun', 'Hund06450' => 'sun', 'Hund12053' => 'sun', 'Hund16800' => 'sun', 'Hund21222' => 'sun', 'Hund22896' => 'sun', 'Hund23746' => 'sun', 'Hund27083' => 'sun', 'Lalb_Chr02g0141831' => 'lal', 'Lalb_Chr02g0141841' => 'lal', 'Lalb_Chr05g0220411' => 'lal', 'Lalb_Chr06g0162081' => 'lal', 'Lalb_Chr09g0327651' => 'lal', 'Lalb_Chr13g0295051' => 'lal', 'Lalb_Chr15g0086801' => 'lal', 'Lalb_Chr16g0383781' => 'lal', 'Lalb_Chr16g0383791' => 'lal', 'Lalb_Chr18g0055441' => 'lal', 'Lalb_Chr18g0059611' => 'lal', 'Lalb_Chr20g0109661' => 'lal', 'Lalb_Chr20g0109831' => 'lal', 'Lalb_Chr20g0121871' => 'lal', 'Lalb_Chr22g0355361' => 'lal', 'Lalb_Chr25g0286371' => 'lal', 'Lj1A1187G43' => 'lonja', 'Lj1A1205T50' => 'lonja', 'Lj1A800G33' => 'lonja', 'Lj1C1187T7' => 'lonja', 'Lj1C843T11' => 'lonja', 'Lj1g0010940' => 'lja', 'Lj2A288T69' => 'lonja', 'Lj3g0024276' => 'lja', 'Lj4A47T76' => 'lonja', 'Lj4g0005805' => 'lja', 'Lj4g0006097' => 'lja', 'Lj4g0008528' => 'lja', 'Lj4g0024907' => 'lja', 'Lj5g0012472' => 'lja', 'Lj5g0018648' => 'lja', 'Lj6C789G1' => 'lonja', 'Lj6g0004000' => 'lja', 'Lj7A292G67' => 'lonja', 'Lj7A292T64' => 'lonja', 'Lj9A400T58' => 'lonja', 'Lsat_1_v5_gn_1_126181' => 'lsa', 'Lsat_1_v5_gn_4_123041' => 'lsa', 'Lsat_1_v5_gn_4_133620' => 'lsa', 'Lsat_1_v5_gn_4_53221' => 'lsa', 'Lsat_1_v5_gn_4_71961' => 'lsa', 'Lsat_1_v5_gn_7_105241' => 'lsa', 'Lsat_1_v5_gn_7_21361' => 'lsa', 'Lsat_1_v5_gn_7_28860' => 'lsa', 'Lsat_1_v5_gn_7_31260' => 'lsa', 'Lsat_1_v5_gn_8_52801' => 'lsa', 'Manes.02G191400' => 'mes', 'Manes.03G110100' => 'mes', 'Manes.04G071100' => 'mes', 'Manes.05G100500' => 'mes', 'Manes.05G164700' => 'mes', 'Manes.15G087000' => 'mes', 'Manes.15G121500' => 'mes', 'Manes.16G028300' => 'mes', 'Manes.17G046100' => 'mes', 'Manes.17G069800' => 'mes', 'Manes.18G100500' => 'mes', 'Mapoly0002s0109' => 'mpo', 'Mapoly0024s0007' => 'mpo', 'Mapoly0089s0032' => 'mpo', 'MBI04_g42241_MAGBIO' => 'mbi', 'MBI05_g11988_MAGBIO' => 'mbi', 'MBI05_g35452_MAGBIO' => 'mbi', 'MBI07_g30179_MAGBIO' => 'mbi', 'MBI07_g35859_MAGBIO' => 'mbi', 'MBI07_g35860_MAGBIO' => 'mbi', 'MBI07_g37166_MAGBIO' => 'mbi', 'MBI08_g18172_MAGBIO' => 'mbi', 'MBI09_g08441_MAGBIO' => 'mbi', 'MBI13_g01676_MAGBIO' => 'mbi', 'MBI14_g42955_MAGBIO' => 'mbi', 'MBI16_g13161_MAGBIO' => 'mbi', 'MBI17_g27204_MAGBIO' => 'mbi', 'MBI19_g21595_MAGBIO' => 'mbi', 'MD00G1148400' => 'mdo', 'MD02G1301200' => 'mdo', 'MD03G1227800' => 'mdo', 'MD05G1041100' => 'mdo', 'MD05G1124800' => 'mdo', 'MD05G1284000' => 'mdo', 'MD05G1338800' => 'mdo', 'MD05G1338900' => 'mdo', 'MD07G1022800' => 'mdo', 'MD10G1047500' => 'mdo', 'MD10G1127500' => 'mdo', 'MD10G1262300' => 'mdo', 'MD10G1293800' => 'mdo', 'MD16G1074300' => 'mdo', 'Medtr1g021670' => 'mtr', 'Medtr1g096320' => 'mtr', 'Medtr2g013690' => 'mtr', 'Medtr2g019450' => 'mtr', 'Medtr2g085170' => 'mtr', 'Medtr4g088785' => 'mtr', 'Medtr8g055930' => 'mtr', 'Medtr8g085850' => 'mtr', 'MELO3C002605.2' => 'cme', 'MELO3C003891.2' => 'cme', 'MELO3C004012.2' => 'cme', 'MELO3C007134.2' => 'cme', 'MELO3C008118.2' => 'cme', 'MELO3C016700.2' => 'cme', 'MELO3C024127.2' => 'cme', 'MELO3C033361.2' => 'cme', 'MELO3C033362.2' => 'cme', 'Migut.C00430' => 'egut', 'Migut.C01246' => 'egut', 'Migut.E00101' => 'egut', 'Migut.H01486' => 'egut', 'Migut.H01939' => 'egut', 'Migut.K00360' => 'egut', 'Migut.M00910' => 'egut', 'Migut.M01139' => 'egut', 'Migut.N02677' => 'egut', 'MSTRG.13252' => 'ama', 'MSTRG.14701' => 'ama', 'MSTRG.1521' => 'ama', 'MSTRG.15884' => 'ama', 'MSTRG.16242' => 'ama', 'MSTRG.22285' => 'ama', 'MSTRG.22444' => 'ama', 'MSTRG.2349' => 'ama', 'MSTRG.26308' => 'ama', 'MSTRG.28296' => 'ama', 'MSTRG.9895' => 'ama', 'Nitab4.5_0000110g0060' => 'nta', 'Nitab4.5_0000420g0130' => 'nta', 'Nitab4.5_0000422g0030' => 'nta', 'Nitab4.5_0000560g0180' => 'nta', 'Nitab4.5_0000703g0100' => 'nta', 'Nitab4.5_0000786g0200' => 'nta', 'Nitab4.5_0001336g0020' => 'nta', 'Nitab4.5_0001796g0030' => 'nta', 'Nitab4.5_0003348g0060' => 'nta', 'Nitab4.5_0003698g0040' => 'nta', 'Nitab4.5_0003942g0090' => 'nta', 'Nitab4.5_0004775g0070' => 'nta', 'Nitab4.5_0004864g0030' => 'nta', 'Nitab4.5_0005615g0020' => 'nta', 'Nitab4.5_0009288g0030' => 'nta', 'Nitab4.5_0009341g0010' => 'nta', 'Nitab4.5_0009535g0010' => 'nta', 'Nn1g03995' => 'nnu', 'Nn1g04100' => 'nnu', 'Nn1g06530' => 'nnu', 'Nn3g16404' => 'nnu', 'Nn3g17212' => 'nnu', 'Nn3g20776' => 'nnu', 'Nn3g21923' => 'nnu', 'Nn5g27737' => 'nnu', 'Nn5g29461' => 'nnu', 'Nn7g38355' => 'nnu', 'Nn8g39873' => 'nnu', 'Oeu000548.2' => 'oeu', 'Oeu004672.1' => 'oeu', 'Oeu015605.2' => 'oeu', 'Oeu016092.1' => 'oeu', 'Oeu017879.3' => 'oeu', 'Oeu024910.1' => 'oeu', 'Oeu028965.1' => 'oeu', 'Oeu031269.1' => 'oeu', 'Oeu031270.1' => 'oeu', 'Oeu032535.1' => 'oeu', 'Oeu034151.1' => 'oeu', 'Oeu034152.1' => 'oeu', 'Oeu034588.2' => 'oeu', 'Oeu050846.1' => 'oeu', 'Oeu050849.2' => 'oeu', 'Oeu051063.2' => 'oeu', 'Oeu052368.1' => 'oeu', 'Oeu052370.1' => 'oeu', 'Os01g0210400' => 'osa', 'Os01g0304300' => 'osa', 'Os01g0749100' => 'osa', 'Os02g0745800' => 'osa', 'Os03g0769050' => 'osa', 'Os05g0531500' => 'osa', 'Os06g0724300' => 'osa', 'Os11g0198100' => 'osa', 'Peaxi162Scf00069g01425' => 'pax', 'Peaxi162Scf00280g00811' => 'pax', 'Peaxi162Scf00310g00615' => 'pax', 'Peaxi162Scf00362g00542' => 'pax', 'Peaxi162Scf00461g00310' => 'pax', 'Peaxi162Scf00530g00118' => 'pax', 'Peaxi162Scf00541g00057' => 'pax', 'Peaxi162Scf00661g00017' => 'pax', 'Peaxi162Scf00926g00027' => 'pax', 'Peaxi162Scf01064g00263' => 'pax', 'Peaxi162Scf01211g00135' => 'pax', 'PGR004G2336' => 'pgr', 'PGR042G0327' => 'pgr', 'PGR042G1957' => 'pgr', 'PGR042G2003' => 'pgr', 'PGR042G3929' => 'pgr', 'PGR083G1137' => 'pgr', 'PGR083G1364' => 'pgr', 'PGSC0003DMG400003381' => 'stu', 'PGSC0003DMG400003417' => 'stu', 'PGSC0003DMG400008981' => 'stu', 'PGSC0003DMG400012417' => 'stu', 'PGSC0003DMG400012823' => 'stu', 'PGSC0003DMG400016885' => 'stu', 'PGSC0003DMG400022812' => 'stu', 'PGSC0003DMG400029726' => 'stu', 'PGSC0003DMG401009243' => 'stu', 'PGSC0003DMG401031505' => 'stu', 'PGSC0003DMG402031505' => 'stu', 'Phvul.001G017600' => 'pvu', 'Phvul.002G193500' => 'pvu', 'Phvul.002G228900' => 'pvu', 'Phvul.002G236800' => 'pvu', 'Phvul.003G049500' => 'pvu', 'Phvul.005G072000' => 'pvu', 'Phvul.006G164800' => 'pvu', 'Phvul.006G185100' => 'pvu', 'Phvul.007G090000' => 'pvu', 'Potri.001G399800' => 'ptr', 'Potri.002G149900' => 'ptr', 'Potri.004G044100' => 'ptr', 'Potri.004G177600' => 'ptr', 'Potri.009G138000' => 'ptr', 'Potri.010G094000' => 'ptr', 'Potri.011G053000' => 'ptr', 'Potri.011G119300' => 'ptr', 'Potri.013G113700' => 'ptr', 'Potri.018G107800' => 'ptr', 'Potri.019G084100' => 'ptr', 'Pp3c14_23720' => 'ppa', 'Pp3c16_6340' => 'ppa', 'Pp3c23_13420' => 'ppa', 'Pp3c24_2740' => 'ppa', 'Pp3c25_860' => 'ppa', 'Pp3c8_21750' => 'ppa', 'Prupe.1G273000' => 'ppe', 'Prupe.1G273700' => 'ppe', 'Prupe.1G274100' => 'ppe', 'Prupe.2G023300' => 'ppe', 'Prupe.4G048000' => 'ppe', 'Prupe.4G080400' => 'ppe', 'Prupe.4G181200' => 'ppe', 'Prupe.8G056900' => 'ppe', 'Prupe.8G168700' => 'ppe', 'Psat1g189080' => 'psa', 'Psat1g204760' => 'psa', 'Psat4g175560' => 'psa', 'Psat4g177720' => 'psa', 'Psat5g244240' => 'psa', 'Psat6g010720' => 'psa', 'Psat6g187200' => 'psa', 'Psat7g072040' => 'psa', 'PSO017G3501' => 'pso', 'PSO063G2148' => 'pso', 'PSO063G5608' => 'pso', 'PSO210G6392' => 'pso', 'PSO541G2319' => 'pso', 'PSO541G2836' => 'pso', 'PSO541G4012' => 'pso', 'PSO541G6253' => 'pso', 'PSO675G0580' => 'pso', 'PSO675G0856' => 'pso', 'PSO675G5635' => 'pso', 'PSO675G9157' => 'pso', 'PSO832G1660' => 'pso', 'PSO832G1969' => 'pso', 'QL02p007186' => 'qlo', 'QL02p033904' => 'qlo', 'QL03p064391' => 'qlo', 'QL05p040593' => 'qlo', 'QL05p058242' => 'qlo', 'QL08p021825' => 'qlo', 'QL11p004981' => 'qlo', 'RcHm_v2.0_Chr1g0318301' => 'rch', 'RcHm_v2.0_Chr4g0418501' => 'rch', 'RcHm_v2.0_Chr4g0439971' => 'rch', 'RcHm_v2.0_Chr5g0008541' => 'rch', 'RcHm_v2.0_Chr5g0014101' => 'rch', 'RcHm_v2.0_Chr5g0014131' => 'rch', 'RcHm_v2.0_Chr5g0033621' => 'rch', 'RcHm_v2.0_Chr6g0272041' => 'rch', 'RcHm_v2.0_Chr6g0278831' => 'rch', 'Rhsim02G0130400' => 'rsi', 'Rhsim02G0171100' => 'rsi', 'Rhsim05G0053000' => 'rsi', 'Rhsim05G0053100' => 'rsi', 'Rhsim06G0096500' => 'rsi', 'Rhsim06G0096600' => 'rsi', 'Rhsim06G0199100' => 'rsi', 'Rhsim12G0062300' => 'rsi', 'Rhsim12G0062800' => 'rsi', 'Sabra02G0118600' => 'sbr', 'Sabra04G0027300' => 'sbr', 'Sabra04G0119500' => 'sbr', 'Sabra08G0112500' => 'sbr', 'Sabra11G0036800' => 'sbr', 'Sabra11G0103800' => 'sbr', 'Sabra13G0096300' => 'sbr', 'Sabra16G0262300' => 'sbr', 'Sabra18G0091700' => 'sbr', 'Sabra19G0095400' => 'sbr', 'SalBow6G3080' => 'sbo', 'SalBow7G1157' => 'sbo', 'SalBow7G2123' => 'sbo', 'SalBow7G2285' => 'sbo', 'SalBow7G3537' => 'sbo', 'SalBow8G2947' => 'sbo', 'SalBow8G4463' => 'sbo', 'SalBow8G5466' => 'sbo', 'Sc01g0001750' => 'sci', 'Sc02g0006640' => 'sci', 'Sc02g0006670' => 'sci', 'Sc04g0008220' => 'sci', 'Sc05g0006190' => 'sci', 'Sc08g0002760' => 'sci', 'Sc17g0006170' => 'sci', 'Sc22g0002050' => 'sci', 'Sc23g0001190' => 'sci', 'Sc24g0000980' => 'sci', 'Sed0006245' => 'sed', 'Sed0007543' => 'sed', 'Sed0009411' => 'sed', 'Sed0010765' => 'sed', 'Sed0012944' => 'sed', 'Sed0014682' => 'sed', 'Sed0016174' => 'sed', 'Sed0016796' => 'sed', 'Sed0020317' => 'sed', 'Sed0021467' => 'sed', 'SEGI_01316' => 'sgi', 'SEGI_03374' => 'sgi', 'SEGI_16265' => 'sgi', 'SEGI_18569' => 'sgi', 'SEGI_20351' => 'sgi', 'SEGI_26395' => 'sgi', 'SEGI_29469' => 'sgi', 'SEGI_34771' => 'sgi', 'SEGI_36769' => 'sgi', 'SEGI_37139' => 'sgi', 'SGA_v2.0_scaffold100G29687' => 'sas', 'SGA_v2.0_scaffold118G32472' => 'sas', 'SGA_v2.0_scaffold14G07051' => 'sas', 'SGA_v2.0_scaffold183G39845' => 'sas', 'SGA_v2.0_scaffold1G00174' => 'sas', 'SGA_v2.0_scaffold22G09714' => 'sas', 'SGA_v2.0_scaffold333G48992' => 'sas', 'SGA_v2.0_scaffold46G17491' => 'sas', 'SGA_v2.0_scaffold49G18294' => 'sas', 'SGA_v2.0_scaffold63G21658' => 'sas', 'SHI01741' => 'shi', 'SHI05771' => 'shi', 'SHI18077' => 'shi', 'SHI20525' => 'shi', 'SHI20527' => 'shi', 'SHI20528' => 'shi', 'SMO172G0185' => 'smo', 'SMO198G0020' => 'smo', 'SMO351G0006' => 'smo', 'SMO356G0118' => 'smo', 'SMO358G0296' => 'smo', 'SMO367G0079' => 'smo', 'SMO367G1277' => 'smo', 'Solyc01g014220.3' => 'sly', 'Solyc01g111770.2' => 'sly', 'Solyc02g078180.3' => 'sly', 'Solyc03g006430.3' => 'sly', 'Solyc03g006456.1' => 'sly', 'Solyc03g079860.2' => 'sly', 'Solyc04g079770.3' => 'sly', 'Solyc05g007430.4' => 'sly', 'Solyc07g063150.3' => 'sly', 'Solyc08g016620.3' => 'sly', 'Solyc09g057590.3' => 'sly', 'Solyc09g057600.1' => 'sly', 'Solyc10g009050.3' => 'sly', 'Solyc11g017420.2' => 'sly', 'Sopen01g053810' => 'spe', 'Sopen02g023040' => 'spe', 'Sopen03g002440' => 'spe', 'Sopen04g033350' => 'spe', 'Sopen05g003310' => 'spe', 'Sopen07g004050' => 'spe', 'Sopen07g031340' => 'spe', 'Sopen08g006990' => 'spe', 'Sopen10g004830' => 'spe', 'Sopen11g009370' => 'spe', 'Sp1g24450' => 'spa', 'Sp1g29670' => 'spa', 'Sp1g39600' => 'spa', 'Sp2g11080' => 'spa', 'Sp2g13970' => 'spa', 'Sp4g16130' => 'spa', 'Sp6g13080' => 'spa', 'Sp7g37270' => 'spa', 'TAR371G0065' => 'tar', 'TAR376G0340' => 'tar', 'TAR376G0435' => 'tar', 'TAR381G0002' => 'tar', 'TAR381G1236' => 'tar', 'TAR624G0055' => 'tar', 'TAR624G0324' => 'tar', 'TAR624G0696' => 'tar', 'TAR624G0906' => 'tar', 'TAR625G0107' => 'tar', 'TAR626G0015' => 'tar', 'TAR626G1356' => 'tar', 'TAR627G0888' => 'tar', 'TAR628G0399' => 'tar', 'TAR628G1327' => 'tar', 'TAR629G2831' => 'tar', 'TAR629G2874' => 'tar', 'TAR633G1432' => 'tar', 'TAR633G2771' => 'tar', 'THA.LOC104803394' => 'tha', 'THA.LOC104805153' => 'tha', 'THA.LOC104806784' => 'tha', 'THA.LOC104810473' => 'tha', 'THA.LOC104813100' => 'tha', 'THA.LOC104814215' => 'tha', 'THA.LOC104815554' => 'tha', 'THA.LOC104820544' => 'tha', 'THA.LOC104824754' => 'tha', 'THA.LOC104827717' => 'tha', 'Thecc.02G031400' => 'tca', 'Thecc.02G055900' => 'tca', 'Thecc.02G350800' => 'tca', 'Thecc.06G150900' => 'tca', 'Thecc.06G186600' => 'tca', 'Thecc.07G089600' => 'tca', 'Thecc.08G020400' => 'tca', 'Thecc.08G182100' => 'tca', 'Thhalv10000873m.g' => 'esa', 'Thhalv10004185m.g' => 'esa', 'Thhalv10006981m.g' => 'esa', 'Thhalv10007204m.g' => 'esa', 'Thhalv10011374m.g' => 'esa', 'Thhalv10013482m.g' => 'esa', 'Thhalv10017801m.g' => 'esa', 'Thhalv10024983m.g' => 'esa', 'TPR.G12072' => 'tpr', 'TPR.G15769' => 'tpr', 'TPR.G16504' => 'tpr', 'TPR.G16506' => 'tpr', 'TPR.G24345' => 'tpr', 'TPR.G26666' => 'tpr', 'TPR.G27320' => 'tpr', 'TPR.G31819' => 'tpr', 'TPR.G38879' => 'tpr', 'TPR.G39015' => 'tpr', 'TPR.G8819' => 'tpr', 'TWI09G0924' => 'twi', 'TWI12G0811' => 'twi', 'TWI12G1294' => 'twi', 'TWI31G0150' => 'twi', 'TWI36G1262' => 'twi', 'TWI38G1287' => 'twi', 'TWI38G1633' => 'twi', 'TWI38G1982' => 'twi', 'TWI39G0116' => 'twi', 'TWI60G1011' => 'twi', 'TWI63G0171' => 'twi', 'TWI73G0839' => 'twi', 'TWI79G1511' => 'twi', 'unitig_0.g915' => 'ugi', 'unitig_0.g916' => 'ugi', 'unitig_21.g20219' => 'ugi', 'unitig_21.g20416' => 'ugi', 'unitig_578.g16132' => 'ugi', 'unitig_578.g16718' => 'ugi', 'unitig_62.g23481' => 'ugi', 'unitig_744.g24535' => 'ugi', 'unitig_749.g13525' => 'ugi', 'vmacro01248' => 'vma', 'vmacro02290' => 'vma', 'vmacro10946' => 'vma', 'vmacro11865' => 'vma', 'vmacro12493' => 'vma', 'vmacro17322' => 'vma', 'vmacro21599' => 'vma', 'vmacro23041' => 'vma', 'VMungo0251G0004' => 'vmu', 'VMungo0251G2639' => 'vmu', 'VMungo0251G2967' => 'vmu', 'VMungo0540G0864' => 'vmu', 'VMungo0540G1569' => 'vmu', 'VMungo0647G0317' => 'vmu', 'VMungo0720G1373' => 'vmu', 'VMungo0720G1508' => 'vmu', 'VMungo1080G0485' => 'vmu', 'VMungo1215G3177' => 'vmu', 'Zm00001eb112600' => 'zma', 'Zm00001eb120220' => 'zma', 'Zm00001eb153240' => 'zma', 'Zm00001eb168880' => 'zma', 'Zm00001eb213920' => 'zma', 'Zm00001eb228280' => 'zma', 'Zm00001eb254580' => 'zma', 'Zm00001eb272180' => 'zma', 'Zm00001eb293190' => 'zma', 'Zm00001eb322930' => 'zma', 'Zm00001eb353360' => 'zma', 'Zm00001eb353390' => 'zma', 'Zm00001eb353430' => 'zma', 'Zm00001eb353440' => 'zma', 'Zm00001eb353780' => 'zma' ) $gf_id = 'HOM05D000499' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000499' ) $data_identifier = 'HOM05D000499' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 29, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 12, 'amhyb' => (int) 8, 'aly' => (int) 12, 'aox' => (int) 9, 'arhy' => (int) 26, 'ath' => (int) 8, 'atr' => (int) 7, 'acertr' => (int) 10, 'cqu' => (int) 15, 'bca' => (int) 29, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 11, 'cansat' => (int) 8, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 9, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 8, 'cpa' => (int) 10, 'csa' => (int) 7, 'camsi' => (int) 20, 'dca' => (int) 8, 'din' => (int) 12, 'dzi' => (int) 14, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 6, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 38, 'gra' => (int) 16, 'vvi' => (int) 8, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 5, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 11, 'lja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 11, 'mpo' => (int) 3, 'mbi' => (int) 14, 'mdo' => (int) 14, 'mtr' => (int) 8, 'cme' => (int) 9, 'egut' => (int) 9, 'ama' => (int) 11, 'nta' => (int) 17, 'nnu' => (int) 11, 'oeu' => (int) 18, 'osa' => (int) 8, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 6, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 9, 'rsi' => (int) 9, 'sbr' => (int) 10, 'sbo' => (int) 8, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 10, 'sas' => (int) 10, 'shi' => (int) 6, 'smo' => (int) 7, 'sly' => (int) 14, 'spe' => (int) 10, 'spa' => (int) 8, 'tar' => (int) 19, 'tha' => (int) 10, 'tca' => (int) 8, 'esa' => (int) 8, 'tpr' => (int) 11, 'twi' => (int) 13, 'ugi' => (int) 9, 'vma' => (int) 8, 'vmu' => (int) 10, 'zma' => (int) 15 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb353780' $species_info = array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ) $local_species = 'ama' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000499', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1066', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p29780' => 'bna', 'A02p33180' => 'bna', 'A03p16470' => 'bna', 'A03p66010' => 'bna', 'A04p25970' => 'bna', 'A06p01270' => 'bna', 'A06p46080' => 'bna', 'A07p11400' => 'bna', 'A08p01840' => 'bna', 'A08p08230' => 'bna', 'A08p25740' => 'bna', 'A09p32070' => 'bna', 'A09p37830' => 'bna', 'A09p42840' => 'bna', 'A09p42850' => 'bna', 'Aa31LG10G2060' => 'aar', 'Aa31LG2G7410' => 'aar', 'Aa31LG6G10200' => 'aar', 'Aa31LG6G16680' => 'aar', 'Aa31LG6G8470' => 'aar', 'Aa31LG9G12730' => 'aar', 'Aa31LG9G13680' => 'aar', 'Aa31LG9G14920' => 'aar', 'Aa31LG9G6650' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4977' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5467' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3254' => 'aag', 'Actinidia02578' => 'ach', 'Actinidia07693' => 'ach', 'Actinidia08413' => 'ach', 'Actinidia08414' => 'ach', 'Actinidia15289' => 'ach', 'Actinidia19871' => 'ach', 'Actinidia21475' => 'ach', 'Actinidia22576' => 'ach', 'Actinidia28327' => 'ach', 'Actinidia32491' => 'ach', 'Actinidia39463' => 'ach', 'Actinidia39571' => 'ach', 'Ah.01g013750' => 'amhyb', 'Ah.01g023210' => 'amhyb', 'Ah.04g164850' => 'amhyb', 'Ah.05g178060' => 'amhyb', 'Ah.07g204270' => 'amhyb', 'Ah.07g208480' => 'amhyb', 'Ah.09g237410' => 'amhyb', 'Ah.14g089460' => 'amhyb', 'AL1G41790' => 'aly', 'AL1G49050' => 'aly', 'AL1G53810' => 'aly', 'AL1G61400' => 'aly', 'AL4G18580' => 'aly', 'AL5G12510' => 'aly', 'AL5G12540' => 'aly', 'AL6G43230' => 'aly', 'AL7G10370' => 'aly', 'AL7G19250' => 'aly', 'AL8G12240' => 'aly', 'AL8G18540' => 'aly', 'Aqoxy1G02409' => 'aox', 'Aqoxy2G03993' => 'aox', 'Aqoxy3G03357' => 'aox', 'Aqoxy4G00785' => 'aox', 'Aqoxy5G02598' => 'aox', 'Aqoxy6G00132' => 'aox', 'Aqoxy7G01776' => 'aox', 'Aqoxy7G02316' => 'aox', 'Aqoxy7G03973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.12AFKW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B8730' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27IQR1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3F75VG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3RE0GA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41TCQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.527VTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FIR39' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5W8UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DA38EV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ63HS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H1I32C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HC27T5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4M8AP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7N3CZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9UVDZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LS1NQA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT1D4B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SKC4TM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCFV76' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF9Q1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQWD9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1ZM88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WE07RT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YCK7VH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJE6Q6' => 'arhy', 'AT1G28240' => 'ath', 'AT1G34550' => 'ath', 'AT1G53040' => 'ath', 'AT2G02910' => 'ath', 'AT4G09630' => 'ath', 'AT4G38500' => 'ath', 'AT5G42660' => 'ath', 'AT5G46220' => 'ath', 'ATR0152G026' => 'atr', 'ATR0564G343' => 'atr', 'ATR0706G151' => 'atr', 'ATR0733G207' => 'atr', 'ATR0751G234' => 'atr', 'ATR0807G048' => 'atr', 'ATR1091G084' => 'atr', 'Atru.chr10.1229' => 'acertr', 'Atru.chr10.1230' => 'acertr', 'Atru.chr10.1874' => 'acertr', 'Atru.chr11.1808' => 'acertr', 'Atru.chr13.1795' => 'acertr', 'Atru.chr13.570' => 'acertr', 'Atru.chr2.2608' => 'acertr', 'Atru.chr2.2609' => 'acertr', 'Atru.chr5.3428' => 'acertr', 'Atru.chr8.1171' => 'acertr', 'AUR62004651' => 'cqu', 'AUR62008675' => 'cqu', 'AUR62010014' => 'cqu', 'AUR62013004' => 'cqu', 'AUR62014825' => 'cqu', 'AUR62015015' => 'cqu', 'AUR62015151' => 'cqu', 'AUR62017020' => 'cqu', 'AUR62019422' => 'cqu', 'AUR62023570' => 'cqu', 'AUR62025571' => 'cqu', 'AUR62029098' => 'cqu', 'AUR62033863' => 'cqu', 'AUR62034296' => 'cqu', 'AUR62040075' => 'cqu', 'BcaB02g07334' => 'bca', 'BcaB02g10575' => 'bca', 'BcaB03g12119' => 'bca', 'BcaB03g12120' => 'bca', 'BcaB03g13945' => 'bca', 'BcaB04g17123' => 'bca', 'BcaB04g17867' => 'bca', 'BcaB04g19839' => 'bca', 'BcaB07g30317' => 'bca', 'BcaB07g32432' => 'bca', 'BcaB07g33362' => 'bca', 'BcaB08g36611' => 'bca', 'BcaC01g00028' => 'bca', 'BcaC01g01356' => 'bca', 'BcaC01g02034' => 'bca', 'BcaC01g06051' => 'bca', 'BcaC03g16839' => 'bca', 'BcaC03g17176' => 'bca', 'BcaC05g26829' => 'bca', 'BcaC06g31490' => 'bca', 'BcaC06g35344' => 'bca', 'BcaC06g36570' => 'bca', 'BcaC07g37537' => 'bca', 'BcaC08g43491' => 'bca', 'BcaC08g43773' => 'bca', 'BcaNung00234' => 'bca', 'BcaNung01982' => 'bca', 'BcaNung03707' => 'bca', 'BcaNung06454' => 'bca', 'BolC2t10762H' => 'bol', 'BolC2t11191H' => 'bol', 'BolC3t14322H' => 'bol', 'BolC3t19747H' => 'bol', 'BolC3t21425H' => 'bol', 'BolC4t27800H' => 'bol', 'BolC5t31423H' => 'bol', 'BolC6t35951H' => 'bol', 'BolC6t36282H' => 'bol', 'BolC7t40678H' => 'bol', 'BolC7t40679H' => 'bol', 'BolC7t42222H' => 'bol', 'BolC7t43492H' => 'bol', 'BolC7t46785H' => 'bol', 'BolC8t47853H' => 'bol', 'BolC9t56805H' => 'bol', 'BraA02t08000Z' => 'bra', 'BraA02t08341Z' => 'bra', 'BraA03t10936Z' => 'bra', 'BraA03t15657Z' => 'bra', 'BraA04t18100Z' => 'bra', 'BraA05t20523Z' => 'bra', 'BraA06t23353Z' => 'bra', 'BraA06t27473Z' => 'bra', 'BraA06t27769Z' => 'bra', 'BraA07t28928Z' => 'bra', 'BraA08t32236Z' => 'bra', 'BraA08t32841Z' => 'bra', 'BraA08t34524Z' => 'bra', 'BraA09t38742Z' => 'bra', 'BraA09t39295Z' => 'bra', 'C02p47180' => 'bna', 'C02p50990' => 'bna', 'C03p19360' => 'bna', 'C03p74950' => 'bna', 'C03p91000' => 'bna', 'C04p63260' => 'bna', 'C05p27050' => 'bna', 'C06p08750' => 'bna', 'C06p11490' => 'bna', 'C07p02820' => 'bna', 'C07p17180' => 'bna', 'C07p29440' => 'bna', 'C07p63730' => 'bna', 'C09p39260' => 'bna', 'CAN.G1164.34' => 'can', 'CAN.G1164.39' => 'can', 'CAN.G1530.3' => 'can', 'CAN.G162.61' => 'can', 'CAN.G176.6' => 'can', 'CAN.G289.49' => 'can', 'CAN.G370.21' => 'can', 'CAN.G370.22' => 'can', 'CAN.G371.117' => 'can', 'CAN.G58.37' => 'can', 'CAN.G588.98' => 'can', 'CANSAT21G2266' => 'cansat', 'CANSAT25G2799' => 'cansat', 'CANSAT35G0862' => 'cansat', 'CANSAT35G1704' => 'cansat', 'CANSAT35G1760' => 'cansat', 'CANSAT56G3971' => 'cansat', 'CANSAT56G4116' => 'cansat', 'CANSAT80G1259' => 'cansat', 'CARHR027730' => 'chi', 'CARHR033880' => 'chi', 'CARHR043270' => 'chi', 'CARHR145330' => 'chi', 'CARHR145340' => 'chi', 'CARHR175570' => 'chi', 'CARHR181570' => 'chi', 'CARHR258470' => 'chi', 'CARHR260490' => 'chi', 'CARHR294220' => 'chi', 'Carub.0001s2668' => 'cru', 'Carub.0001s3257' => 'cru', 'Carub.0001s4220' => 'cru', 'Carub.0005s0179' => 'cru', 'Carub.0006s2807' => 'cru', 'Carub.0007s0039' => 'cru', 'Carub.0008s0169' => 'cru', 'Carub.0008s0636' => 'cru', 'Ca_00338_v3' => 'car', 'Ca_00542_v3' => 'car', 'Ca_01844_v3' => 'car', 'Ca_10611_v3' => 'car', 'Ca_13326_v3' => 'car', 'Ca_17944_v3' => 'car', 'Ca_18546_v3' => 'car', 'Ca_24219_v3' => 'car', 'Ca_29972_v3' => 'car', 'CBR_g3681' => 'cbr', 'CBR_g40021' => 'cbr', 'Cc01_g08140' => 'ccan', 'Cc02_g13410' => 'ccan', 'Cc02_g37480' => 'ccan', 'Cc05_g12030' => 'ccan', 'Cc09_g03370' => 'ccan', 'Cc09_g10300' => 'ccan', 'Cc10_g03530' => 'ccan', 'Cc10_g11380' => 'ccan', 'CDE01G0176' => 'cde', 'CDE02G0675' => 'cde', 'CDE02G0942' => 'cde', 'CDE02G1153' => 'cde', 'CDE02G4177' => 'cde', 'CDE04G2117' => 'cde', 'CDE04G2736' => 'cde', 'CDE08G1161' => 'cde', 'CDE09G1238' => 'cde', 'Cfa000467' => 'cfa', 'Cfa000947' => 'cfa', 'Cfa004969' => 'cfa', 'Cfa005284' => 'cfa', 'Cfa008993' => 'cfa', 'Cfa018187' => 'cfa', 'Cfa018454' => 'cfa', 'Cfa020585' => 'cfa', 'Ciclev10000424m.g' => 'ccl', 'Ciclev10003605m.g' => 'ccl', 'Ciclev10007828m.g' => 'ccl', 'Ciclev10014620m.g' => 'ccl', 'Ciclev10015169m.g' => 'ccl', 'Ciclev10018291m.g' => 'ccl', 'Ciclev10028256m.g' => 'ccl', 'Ciclev10033822m.g' => 'ccl', 'CiPaw.05G060300' => 'cil', 'CiPaw.05G085000' => 'cil', 'CiPaw.06G083700' => 'cil', 'CiPaw.06G120300' => 'cil', 'CiPaw.09G060500' => 'cil', 'CiPaw.09G123800' => 'cil', 'CiPaw.11G169700' => 'cil', 'CiPaw.12G118300' => 'cil', 'CiPaw.15G071000' => 'cil', 'CiPaw.15G081900' => 'cil', 'ClCG01G024610' => 'cla', 'ClCG03G006070' => 'cla', 'ClCG05G019250' => 'cla', 'ClCG09G009500' => 'cla', 'ClCG11G008200' => 'cla', 'ClCG11G018080' => 'cla', 'COL.COLO4_17373' => 'col', 'COL.COLO4_22994' => 'col', 'COL.COLO4_26389' => 'col', 'COL.COLO4_27170' => 'col', 'COL.COLO4_31074' => 'col', 'COL.COLO4_31465' => 'col', 'COL.COLO4_36438' => 'col', 'COL.COLO4_36439' => 'col', 'Cpa.g.c38781' => 'cpa', 'Cpa.g.sc128.12' => 'cpa', 'Cpa.g.sc166.7' => 'cpa', 'Cpa.g.sc166.8' => 'cpa', 'Cpa.g.sc20.111' => 'cpa', 'Cpa.g.sc27.31' => 'cpa', 'Cpa.g.sc64.36' => 'cpa', 'Cpa.g.sc64.37' => 'cpa', 'Cpa.g.sc66.49' => 'cpa', 'Cpa.g.sc80.64' => 'cpa', 'CsaV3_1G012320' => 'csa', 'CsaV3_2G008480' => 'csa', 'CsaV3_2G033450' => 'csa', 'CsaV3_3G044830' => 'csa', 'CsaV3_4G033710' => 'csa', 'CsaV3_6G051730' => 'csa', 'CsaV3_7G025350' => 'csa', 'CSS0001067' => 'camsi', 'CSS0005996' => 'camsi', 'CSS0006590' => 'camsi', 'CSS0009673' => 'camsi', 'CSS0010201' => 'camsi', 'CSS0010549' => 'camsi', 'CSS0011364' => 'camsi', 'CSS0014473' => 'camsi', 'CSS0014961' => 'camsi', 'CSS0020191' => 'camsi', 'CSS0021165' => 'camsi', 'CSS0022306' => 'camsi', 'CSS0030591' => 'camsi', 'CSS0030696' => 'camsi', 'CSS0032653' => 'camsi', 'CSS0037487' => 'camsi', 'CSS0041102' => 'camsi', 'CSS0041261' => 'camsi', 'CSS0046246' => 'camsi', 'CSS0049256' => 'camsi', 'DCAR_004075' => 'dca', 'DCAR_011538' => 'dca', 'DCAR_019553' => 'dca', 'DCAR_020952' => 'dca', 'DCAR_021739' => 'dca', 'DCAR_027407' => 'dca', 'DCAR_027913' => 'dca', 'DCAR_028066' => 'dca', 'Dinv05899' => 'din', 'Dinv07563' => 'din', 'Dinv08010' => 'din', 'Dinv14125' => 'din', 'Dinv20172' => 'din', 'Dinv30743' => 'din', 'Dinv31229' => 'din', 'Dinv34162' => 'din', 'Dinv36028' => 'din', 'Dinv39368' => 'din', 'Dinv40565' => 'din', 'Dinv41706' => 'din', 'Duzib052G0089' => 'dzi', 'Duzib116G0641' => 'dzi', 'Duzib132G0069' => 'dzi', 'Duzib132G1219' => 'dzi', 'Duzib147G0278' => 'dzi', 'Duzib160G0480' => 'dzi', 'Duzib170G0661' => 'dzi', 'Duzib177G0591' => 'dzi', 'Duzib187G1353' => 'dzi', 'Duzib192G0858' => 'dzi', 'Duzib192G0883' => 'dzi', 'Duzib213G0506' => 'dzi', 'Duzib235G0289' => 'dzi', 'Duzib251G0422' => 'dzi', 'ECA232G3898' => 'eca', 'ECA233G5950' => 'eca', 'ECA234G1699' => 'eca', 'ECA234G2421' => 'eca', 'ECA236G0426' => 'eca', 'ECA236G4331' => 'eca', 'ECA248G2573' => 'eca', 'EL10Ac1g00077' => 'bvu', 'EL10Ac1g01746' => 'bvu', 'EL10Ac2g03464' => 'bvu', 'EL10Ac4g08176' => 'bvu', 'EL10Ac7g17521' => 'bvu', 'EL10Ac8g20386' => 'bvu', 'EL10Ac9g21343' => 'bvu', 'EL10Ac9g22688' => 'bvu', 'Eucgr.B03434' => 'egr', 'Eucgr.D00618' => 'egr', 'Eucgr.E02395' => 'egr', 'Eucgr.F01129' => 'egr', 'Eucgr.F02622' => 'egr', 'Eucgr.F04207' => 'egr', 'FAN01G0570' => 'fan', 'FAN03G3351' => 'fan', 'FAN06G3702' => 'fan', 'FAN07G2149' => 'fan', 'FAN10G3758' => 'fan', 'FAN11G1170' => 'fan', 'FAN11G2050' => 'fan', 'FAN11G2724' => 'fan', 'FAN12G1700' => 'fan', 'FAN12G2028' => 'fan', 'FAN15G1160' => 'fan', 'FAN15G3063' => 'fan', 'FAN16G2540' => 'fan', 'FAN16G3077' => 'fan', 'FAN16G3624' => 'fan', 'FAN17G0221' => 'fan', 'FAN20G2492' => 'fan', 'FAN20G2905' => 'fan', 'FAN21G0548' => 'fan', 'FAN21G1300' => 'fan', 'FAN22G0077' => 'fan', 'FAN22G1315' => 'fan', 'FAN24G1280' => 'fan', 'FAN24G1445' => 'fan', 'FAN24G3527' => 'fan', 'FAN25G0464' => 'fan', 'FAN25G2885' => 'fan', 'FAN25G3270' => 'fan', 'FAN27G1101' => 'fan', 'FAN27G2846' => 'fan', 'FAN27G3524' => 'fan', 'FvH4_2g11770' => 'fve', 'FvH4_2g15630' => 'fve', 'FvH4_3g05570' => 'fve', 'FvH4_3g09110' => 'fve', 'FvH4_3g19940' => 'fve', 'FvH4_4g04821' => 'fve', 'FvH4_4g31480' => 'fve', 'FvH4_7g01740' => 'fve', 'Glyma.05G130400' => 'gma', 'Glyma.05G156400' => 'gma', 'Glyma.07G197000' => 'gma', 'Glyma.08G085151' => 'gma', 'Glyma.08G114500' => 'gma', 'Glyma.08G300400' => 'gma', 'Glyma.10G215800' => 'gma', 'Glyma.12G224400' => 'gma', 'Glyma.13G179300' => 'gma', 'Glyma.13G218151' => 'gma', 'Glyma.13G238800' => 'gma', 'Glyma.13G276900' => 'gma', 'Glyma.14G078200' => 'gma', 'Glyma.15G074500' => 'gma', 'Glyma.15G094100' => 'gma', 'Glyma.17G247200' => 'gma', 'Glyma.18G120100' => 'gma', 'Glyma.20G176000' => 'gma', 'Gohir.A01G063600' => 'ghi', 'Gohir.A01G170301' => 'ghi', 'Gohir.A02G060500' => 'ghi', 'Gohir.A05G133850' => 'ghi', 'Gohir.A05G161400' => 'ghi', 'Gohir.A06G012900' => 'ghi', 'Gohir.A06G035901' => 'ghi', 'Gohir.A06G127100' => 'ghi', 'Gohir.A06G210500' => 'ghi', 'Gohir.A08G008650' => 'ghi', 'Gohir.A09G072700' => 'ghi', 'Gohir.A09G088301' => 'ghi', 'Gohir.A10G040600' => 'ghi', 'Gohir.A12G036300' => 'ghi', 'Gohir.A12G143350' => 'ghi', 'Gohir.A12G165500' => 'ghi', 'Gohir.A13G145700' => 'ghi', 'Gohir.D01G050000' => 'ghi', 'Gohir.D01G051366' => 'ghi', 'Gohir.D01G161350' => 'ghi', 'Gohir.D02G065900' => 'ghi', 'Gohir.D05G164200' => 'ghi', 'Gohir.D05G355500' => 'ghi', 'Gohir.D06G010400' => 'ghi', 'Gohir.D06G111250' => 'ghi', 'Gohir.D06G132000' => 'ghi', 'Gohir.D06G210500' => 'ghi', 'Gohir.D07G165675' => 'ghi', 'Gohir.D08G062240' => 'ghi', 'Gohir.D08G086101' => 'ghi', 'Gohir.D08G138060' => 'ghi', 'Gohir.D09G072300' => 'ghi', 'Gohir.D10G041400' => 'ghi', 'Gohir.D11G191020' => 'ghi', 'Gohir.D11G212066' => 'ghi', 'Gohir.D12G036300' => 'ghi', 'Gohir.D12G168600' => 'ghi', 'Gohir.D13G150600' => 'ghi', 'Gorai.001G057300' => 'gra', 'Gorai.002G069900' => 'gra', 'Gorai.002G200000' => 'gra', 'Gorai.003G067600' => 'gra', 'Gorai.005G074800' => 'gra', 'Gorai.006G087300' => 'gra', 'Gorai.008G037500' => 'gra', 'Gorai.008G181400' => 'gra', 'Gorai.009G169400' => 'gra', 'Gorai.009G387900' => 'gra', 'Gorai.010G013300' => 'gra', 'Gorai.010G153800' => 'gra', 'Gorai.010G255800' => 'gra', 'Gorai.011G043700' => 'gra', 'Gorai.011G198900' => 'gra', 'Gorai.013G168400' => 'gra', 'GSVIVG01005212001' => 'vvi', 'GSVIVG01006163001' => 'vvi', 'GSVIVG01009625001' => 'vvi', 'GSVIVG01014338001' => 'vvi', 'GSVIVG01020005001' => 'vvi', 'GSVIVG01021450001' => 'vvi', 'GSVIVG01023975001' => 'vvi', 'GSVIVG01034490001' => 'vvi', 'HanXRQChr04g0112071' => 'han', 'HanXRQChr05g0131151' => 'han', 'HanXRQChr09g0262371' => 'han', 'HanXRQChr09g0268401' => 'han', 'HanXRQChr10g0279241' => 'han', 'HanXRQChr10g0297961' => 'han', 'HanXRQChr11g0326231' => 'han', 'HanXRQChr11g0328471' => 'han', 'HanXRQChr16g0507941' => 'han', 'HanXRQChr17g0560211' => 'han', 'Haze_02108' => 'cav', 'Haze_02428' => 'cav', 'Haze_05593' => 'cav', 'Haze_06448' => 'cav', 'Haze_09427' => 'cav', 'Haze_12022' => 'cav', 'Haze_17612' => 'cav', 'Haze_17928' => 'cav', 'Hma1.2p1_0032F.1_g019250' => 'hma', 'Hma1.2p1_0163F.1_g072690' => 'hma', 'Hma1.2p1_0265F.1_g106710' => 'hma', 'Hma1.2p1_0286F.1_g113970' => 'hma', 'Hma1.2p1_0363F.1_g136640' => 'hma', 'Hma1.2p1_0584F.1_g183470' => 'hma', 'Hma1.2p1_0885F.1_g232570' => 'hma', 'HPP92_006022' => 'vpl', 'HPP92_007320' => 'vpl', 'HPP92_011521' => 'vpl', 'HPP92_019387' => 'vpl', 'HPP92_024038' => 'vpl', 'Hund05891' => 'sun', 'Hund06450' => 'sun', 'Hund12053' => 'sun', 'Hund16800' => 'sun', 'Hund21222' => 'sun', 'Hund22896' => 'sun', 'Hund23746' => 'sun', 'Hund27083' => 'sun', 'Lalb_Chr02g0141831' => 'lal', 'Lalb_Chr02g0141841' => 'lal', 'Lalb_Chr05g0220411' => 'lal', 'Lalb_Chr06g0162081' => 'lal', 'Lalb_Chr09g0327651' => 'lal', 'Lalb_Chr13g0295051' => 'lal', 'Lalb_Chr15g0086801' => 'lal', 'Lalb_Chr16g0383781' => 'lal', 'Lalb_Chr16g0383791' => 'lal', 'Lalb_Chr18g0055441' => 'lal', 'Lalb_Chr18g0059611' => 'lal', 'Lalb_Chr20g0109661' => 'lal', 'Lalb_Chr20g0109831' => 'lal', 'Lalb_Chr20g0121871' => 'lal', 'Lalb_Chr22g0355361' => 'lal', 'Lalb_Chr25g0286371' => 'lal', 'Lj1A1187G43' => 'lonja', 'Lj1A1205T50' => 'lonja', 'Lj1A800G33' => 'lonja', 'Lj1C1187T7' => 'lonja', 'Lj1C843T11' => 'lonja', 'Lj1g0010940' => 'lja', 'Lj2A288T69' => 'lonja', 'Lj3g0024276' => 'lja', 'Lj4A47T76' => 'lonja', 'Lj4g0005805' => 'lja', 'Lj4g0006097' => 'lja', 'Lj4g0008528' => 'lja', 'Lj4g0024907' => 'lja', 'Lj5g0012472' => 'lja', 'Lj5g0018648' => 'lja', 'Lj6C789G1' => 'lonja', 'Lj6g0004000' => 'lja', 'Lj7A292G67' => 'lonja', 'Lj7A292T64' => 'lonja', 'Lj9A400T58' => 'lonja', 'Lsat_1_v5_gn_1_126181' => 'lsa', 'Lsat_1_v5_gn_4_123041' => 'lsa', 'Lsat_1_v5_gn_4_133620' => 'lsa', 'Lsat_1_v5_gn_4_53221' => 'lsa', 'Lsat_1_v5_gn_4_71961' => 'lsa', 'Lsat_1_v5_gn_7_105241' => 'lsa', 'Lsat_1_v5_gn_7_21361' => 'lsa', 'Lsat_1_v5_gn_7_28860' => 'lsa', 'Lsat_1_v5_gn_7_31260' => 'lsa', 'Lsat_1_v5_gn_8_52801' => 'lsa', 'Manes.02G191400' => 'mes', 'Manes.03G110100' => 'mes', 'Manes.04G071100' => 'mes', 'Manes.05G100500' => 'mes', 'Manes.05G164700' => 'mes', 'Manes.15G087000' => 'mes', 'Manes.15G121500' => 'mes', 'Manes.16G028300' => 'mes', 'Manes.17G046100' => 'mes', 'Manes.17G069800' => 'mes', 'Manes.18G100500' => 'mes', 'Mapoly0002s0109' => 'mpo', 'Mapoly0024s0007' => 'mpo', 'Mapoly0089s0032' => 'mpo', 'MBI04_g42241_MAGBIO' => 'mbi', 'MBI05_g11988_MAGBIO' => 'mbi', 'MBI05_g35452_MAGBIO' => 'mbi', 'MBI07_g30179_MAGBIO' => 'mbi', 'MBI07_g35859_MAGBIO' => 'mbi', 'MBI07_g35860_MAGBIO' => 'mbi', 'MBI07_g37166_MAGBIO' => 'mbi', 'MBI08_g18172_MAGBIO' => 'mbi', 'MBI09_g08441_MAGBIO' => 'mbi', 'MBI13_g01676_MAGBIO' => 'mbi', 'MBI14_g42955_MAGBIO' => 'mbi', 'MBI16_g13161_MAGBIO' => 'mbi', 'MBI17_g27204_MAGBIO' => 'mbi', 'MBI19_g21595_MAGBIO' => 'mbi', 'MD00G1148400' => 'mdo', 'MD02G1301200' => 'mdo', 'MD03G1227800' => 'mdo', 'MD05G1041100' => 'mdo', 'MD05G1124800' => 'mdo', 'MD05G1284000' => 'mdo', 'MD05G1338800' => 'mdo', 'MD05G1338900' => 'mdo', 'MD07G1022800' => 'mdo', 'MD10G1047500' => 'mdo', 'MD10G1127500' => 'mdo', 'MD10G1262300' => 'mdo', 'MD10G1293800' => 'mdo', 'MD16G1074300' => 'mdo', 'Medtr1g021670' => 'mtr', 'Medtr1g096320' => 'mtr', 'Medtr2g013690' => 'mtr', 'Medtr2g019450' => 'mtr', 'Medtr2g085170' => 'mtr', 'Medtr4g088785' => 'mtr', 'Medtr8g055930' => 'mtr', 'Medtr8g085850' => 'mtr', 'MELO3C002605.2' => 'cme', 'MELO3C003891.2' => 'cme', 'MELO3C004012.2' => 'cme', 'MELO3C007134.2' => 'cme', 'MELO3C008118.2' => 'cme', 'MELO3C016700.2' => 'cme', 'MELO3C024127.2' => 'cme', 'MELO3C033361.2' => 'cme', 'MELO3C033362.2' => 'cme', 'Migut.C00430' => 'egut', 'Migut.C01246' => 'egut', 'Migut.E00101' => 'egut', 'Migut.H01486' => 'egut', 'Migut.H01939' => 'egut', 'Migut.K00360' => 'egut', 'Migut.M00910' => 'egut', 'Migut.M01139' => 'egut', 'Migut.N02677' => 'egut', 'MSTRG.13252' => 'ama', 'MSTRG.14701' => 'ama', 'MSTRG.1521' => 'ama', 'MSTRG.15884' => 'ama', 'MSTRG.16242' => 'ama', 'MSTRG.22285' => 'ama', 'MSTRG.22444' => 'ama', 'MSTRG.2349' => 'ama', 'MSTRG.26308' => 'ama', 'MSTRG.28296' => 'ama', 'MSTRG.9895' => 'ama', 'Nitab4.5_0000110g0060' => 'nta', 'Nitab4.5_0000420g0130' => 'nta', 'Nitab4.5_0000422g0030' => 'nta', 'Nitab4.5_0000560g0180' => 'nta', 'Nitab4.5_0000703g0100' => 'nta', 'Nitab4.5_0000786g0200' => 'nta', 'Nitab4.5_0001336g0020' => 'nta', 'Nitab4.5_0001796g0030' => 'nta', 'Nitab4.5_0003348g0060' => 'nta', 'Nitab4.5_0003698g0040' => 'nta', 'Nitab4.5_0003942g0090' => 'nta', 'Nitab4.5_0004775g0070' => 'nta', 'Nitab4.5_0004864g0030' => 'nta', 'Nitab4.5_0005615g0020' => 'nta', 'Nitab4.5_0009288g0030' => 'nta', 'Nitab4.5_0009341g0010' => 'nta', 'Nitab4.5_0009535g0010' => 'nta', 'Nn1g03995' => 'nnu', 'Nn1g04100' => 'nnu', 'Nn1g06530' => 'nnu', 'Nn3g16404' => 'nnu', 'Nn3g17212' => 'nnu', 'Nn3g20776' => 'nnu', 'Nn3g21923' => 'nnu', 'Nn5g27737' => 'nnu', 'Nn5g29461' => 'nnu', 'Nn7g38355' => 'nnu', 'Nn8g39873' => 'nnu', 'Oeu000548.2' => 'oeu', 'Oeu004672.1' => 'oeu', 'Oeu015605.2' => 'oeu', 'Oeu016092.1' => 'oeu', 'Oeu017879.3' => 'oeu', 'Oeu024910.1' => 'oeu', 'Oeu028965.1' => 'oeu', 'Oeu031269.1' => 'oeu', 'Oeu031270.1' => 'oeu', 'Oeu032535.1' => 'oeu', 'Oeu034151.1' => 'oeu', 'Oeu034152.1' => 'oeu', 'Oeu034588.2' => 'oeu', 'Oeu050846.1' => 'oeu', 'Oeu050849.2' => 'oeu', 'Oeu051063.2' => 'oeu', 'Oeu052368.1' => 'oeu', 'Oeu052370.1' => 'oeu', 'Os01g0210400' => 'osa', 'Os01g0304300' => 'osa', 'Os01g0749100' => 'osa', 'Os02g0745800' => 'osa', 'Os03g0769050' => 'osa', 'Os05g0531500' => 'osa', 'Os06g0724300' => 'osa', 'Os11g0198100' => 'osa', 'Peaxi162Scf00069g01425' => 'pax', 'Peaxi162Scf00280g00811' => 'pax', 'Peaxi162Scf00310g00615' => 'pax', 'Peaxi162Scf00362g00542' => 'pax', 'Peaxi162Scf00461g00310' => 'pax', 'Peaxi162Scf00530g00118' => 'pax', 'Peaxi162Scf00541g00057' => 'pax', 'Peaxi162Scf00661g00017' => 'pax', 'Peaxi162Scf00926g00027' => 'pax', 'Peaxi162Scf01064g00263' => 'pax', 'Peaxi162Scf01211g00135' => 'pax', 'PGR004G2336' => 'pgr', 'PGR042G0327' => 'pgr', 'PGR042G1957' => 'pgr', 'PGR042G2003' => 'pgr', 'PGR042G3929' => 'pgr', 'PGR083G1137' => 'pgr', 'PGR083G1364' => 'pgr', 'PGSC0003DMG400003381' => 'stu', 'PGSC0003DMG400003417' => 'stu', 'PGSC0003DMG400008981' => 'stu', 'PGSC0003DMG400012417' => 'stu', 'PGSC0003DMG400012823' => 'stu', 'PGSC0003DMG400016885' => 'stu', 'PGSC0003DMG400022812' => 'stu', 'PGSC0003DMG400029726' => 'stu', 'PGSC0003DMG401009243' => 'stu', 'PGSC0003DMG401031505' => 'stu', 'PGSC0003DMG402031505' => 'stu', 'Phvul.001G017600' => 'pvu', 'Phvul.002G193500' => 'pvu', 'Phvul.002G228900' => 'pvu', 'Phvul.002G236800' => 'pvu', 'Phvul.003G049500' => 'pvu', 'Phvul.005G072000' => 'pvu', 'Phvul.006G164800' => 'pvu', 'Phvul.006G185100' => 'pvu', 'Phvul.007G090000' => 'pvu', 'Potri.001G399800' => 'ptr', 'Potri.002G149900' => 'ptr', 'Potri.004G044100' => 'ptr', 'Potri.004G177600' => 'ptr', 'Potri.009G138000' => 'ptr', 'Potri.010G094000' => 'ptr', 'Potri.011G053000' => 'ptr', 'Potri.011G119300' => 'ptr', 'Potri.013G113700' => 'ptr', 'Potri.018G107800' => 'ptr', 'Potri.019G084100' => 'ptr', 'Pp3c14_23720' => 'ppa', 'Pp3c16_6340' => 'ppa', 'Pp3c23_13420' => 'ppa', 'Pp3c24_2740' => 'ppa', 'Pp3c25_860' => 'ppa', 'Pp3c8_21750' => 'ppa', 'Prupe.1G273000' => 'ppe', 'Prupe.1G273700' => 'ppe', 'Prupe.1G274100' => 'ppe', 'Prupe.2G023300' => 'ppe', 'Prupe.4G048000' => 'ppe', 'Prupe.4G080400' => 'ppe', 'Prupe.4G181200' => 'ppe', 'Prupe.8G056900' => 'ppe', 'Prupe.8G168700' => 'ppe', 'Psat1g189080' => 'psa', 'Psat1g204760' => 'psa', 'Psat4g175560' => 'psa', 'Psat4g177720' => 'psa', 'Psat5g244240' => 'psa', 'Psat6g010720' => 'psa', 'Psat6g187200' => 'psa', 'Psat7g072040' => 'psa', 'PSO017G3501' => 'pso', 'PSO063G2148' => 'pso', 'PSO063G5608' => 'pso', 'PSO210G6392' => 'pso', 'PSO541G2319' => 'pso', 'PSO541G2836' => 'pso', 'PSO541G4012' => 'pso', 'PSO541G6253' => 'pso', 'PSO675G0580' => 'pso', 'PSO675G0856' => 'pso', 'PSO675G5635' => 'pso', 'PSO675G9157' => 'pso', 'PSO832G1660' => 'pso', 'PSO832G1969' => 'pso', 'QL02p007186' => 'qlo', 'QL02p033904' => 'qlo', 'QL03p064391' => 'qlo', 'QL05p040593' => 'qlo', 'QL05p058242' => 'qlo', 'QL08p021825' => 'qlo', 'QL11p004981' => 'qlo', 'RcHm_v2.0_Chr1g0318301' => 'rch', 'RcHm_v2.0_Chr4g0418501' => 'rch', 'RcHm_v2.0_Chr4g0439971' => 'rch', 'RcHm_v2.0_Chr5g0008541' => 'rch', 'RcHm_v2.0_Chr5g0014101' => 'rch', 'RcHm_v2.0_Chr5g0014131' => 'rch', 'RcHm_v2.0_Chr5g0033621' => 'rch', 'RcHm_v2.0_Chr6g0272041' => 'rch', 'RcHm_v2.0_Chr6g0278831' => 'rch', 'Rhsim02G0130400' => 'rsi', 'Rhsim02G0171100' => 'rsi', 'Rhsim05G0053000' => 'rsi', 'Rhsim05G0053100' => 'rsi', 'Rhsim06G0096500' => 'rsi', 'Rhsim06G0096600' => 'rsi', 'Rhsim06G0199100' => 'rsi', 'Rhsim12G0062300' => 'rsi', 'Rhsim12G0062800' => 'rsi', 'Sabra02G0118600' => 'sbr', 'Sabra04G0027300' => 'sbr', 'Sabra04G0119500' => 'sbr', 'Sabra08G0112500' => 'sbr', 'Sabra11G0036800' => 'sbr', 'Sabra11G0103800' => 'sbr', 'Sabra13G0096300' => 'sbr', 'Sabra16G0262300' => 'sbr', 'Sabra18G0091700' => 'sbr', 'Sabra19G0095400' => 'sbr', 'SalBow6G3080' => 'sbo', 'SalBow7G1157' => 'sbo', 'SalBow7G2123' => 'sbo', 'SalBow7G2285' => 'sbo', 'SalBow7G3537' => 'sbo', 'SalBow8G2947' => 'sbo', 'SalBow8G4463' => 'sbo', 'SalBow8G5466' => 'sbo', 'Sc01g0001750' => 'sci', 'Sc02g0006640' => 'sci', 'Sc02g0006670' => 'sci', 'Sc04g0008220' => 'sci', 'Sc05g0006190' => 'sci', 'Sc08g0002760' => 'sci', 'Sc17g0006170' => 'sci', 'Sc22g0002050' => 'sci', 'Sc23g0001190' => 'sci', 'Sc24g0000980' => 'sci', 'Sed0006245' => 'sed', 'Sed0007543' => 'sed', 'Sed0009411' => 'sed', 'Sed0010765' => 'sed', 'Sed0012944' => 'sed', 'Sed0014682' => 'sed', 'Sed0016174' => 'sed', 'Sed0016796' => 'sed', 'Sed0020317' => 'sed', 'Sed0021467' => 'sed', 'SEGI_01316' => 'sgi', 'SEGI_03374' => 'sgi', 'SEGI_16265' => 'sgi', 'SEGI_18569' => 'sgi', 'SEGI_20351' => 'sgi', 'SEGI_26395' => 'sgi', 'SEGI_29469' => 'sgi', 'SEGI_34771' => 'sgi', 'SEGI_36769' => 'sgi', 'SEGI_37139' => 'sgi', 'SGA_v2.0_scaffold100G29687' => 'sas', 'SGA_v2.0_scaffold118G32472' => 'sas', 'SGA_v2.0_scaffold14G07051' => 'sas', 'SGA_v2.0_scaffold183G39845' => 'sas', 'SGA_v2.0_scaffold1G00174' => 'sas', 'SGA_v2.0_scaffold22G09714' => 'sas', 'SGA_v2.0_scaffold333G48992' => 'sas', 'SGA_v2.0_scaffold46G17491' => 'sas', 'SGA_v2.0_scaffold49G18294' => 'sas', 'SGA_v2.0_scaffold63G21658' => 'sas', 'SHI01741' => 'shi', 'SHI05771' => 'shi', 'SHI18077' => 'shi', 'SHI20525' => 'shi', 'SHI20527' => 'shi', 'SHI20528' => 'shi', 'SMO172G0185' => 'smo', 'SMO198G0020' => 'smo', 'SMO351G0006' => 'smo', 'SMO356G0118' => 'smo', 'SMO358G0296' => 'smo', 'SMO367G0079' => 'smo', 'SMO367G1277' => 'smo', 'Solyc01g014220.3' => 'sly', 'Solyc01g111770.2' => 'sly', 'Solyc02g078180.3' => 'sly', 'Solyc03g006430.3' => 'sly', 'Solyc03g006456.1' => 'sly', 'Solyc03g079860.2' => 'sly', 'Solyc04g079770.3' => 'sly', 'Solyc05g007430.4' => 'sly', 'Solyc07g063150.3' => 'sly', 'Solyc08g016620.3' => 'sly', 'Solyc09g057590.3' => 'sly', 'Solyc09g057600.1' => 'sly', 'Solyc10g009050.3' => 'sly', 'Solyc11g017420.2' => 'sly', 'Sopen01g053810' => 'spe', 'Sopen02g023040' => 'spe', 'Sopen03g002440' => 'spe', 'Sopen04g033350' => 'spe', 'Sopen05g003310' => 'spe', 'Sopen07g004050' => 'spe', 'Sopen07g031340' => 'spe', 'Sopen08g006990' => 'spe', 'Sopen10g004830' => 'spe', 'Sopen11g009370' => 'spe', 'Sp1g24450' => 'spa', 'Sp1g29670' => 'spa', 'Sp1g39600' => 'spa', 'Sp2g11080' => 'spa', 'Sp2g13970' => 'spa', 'Sp4g16130' => 'spa', 'Sp6g13080' => 'spa', 'Sp7g37270' => 'spa', 'TAR371G0065' => 'tar', 'TAR376G0340' => 'tar', 'TAR376G0435' => 'tar', 'TAR381G0002' => 'tar', 'TAR381G1236' => 'tar', 'TAR624G0055' => 'tar', 'TAR624G0324' => 'tar', 'TAR624G0696' => 'tar', 'TAR624G0906' => 'tar', 'TAR625G0107' => 'tar', 'TAR626G0015' => 'tar', 'TAR626G1356' => 'tar', 'TAR627G0888' => 'tar', 'TAR628G0399' => 'tar', 'TAR628G1327' => 'tar', 'TAR629G2831' => 'tar', 'TAR629G2874' => 'tar', 'TAR633G1432' => 'tar', 'TAR633G2771' => 'tar', 'THA.LOC104803394' => 'tha', 'THA.LOC104805153' => 'tha', 'THA.LOC104806784' => 'tha', 'THA.LOC104810473' => 'tha', 'THA.LOC104813100' => 'tha', 'THA.LOC104814215' => 'tha', 'THA.LOC104815554' => 'tha', 'THA.LOC104820544' => 'tha', 'THA.LOC104824754' => 'tha', 'THA.LOC104827717' => 'tha', 'Thecc.02G031400' => 'tca', 'Thecc.02G055900' => 'tca', 'Thecc.02G350800' => 'tca', 'Thecc.06G150900' => 'tca', 'Thecc.06G186600' => 'tca', 'Thecc.07G089600' => 'tca', 'Thecc.08G020400' => 'tca', 'Thecc.08G182100' => 'tca', 'Thhalv10000873m.g' => 'esa', 'Thhalv10004185m.g' => 'esa', 'Thhalv10006981m.g' => 'esa', 'Thhalv10007204m.g' => 'esa', 'Thhalv10011374m.g' => 'esa', 'Thhalv10013482m.g' => 'esa', 'Thhalv10017801m.g' => 'esa', 'Thhalv10024983m.g' => 'esa', 'TPR.G12072' => 'tpr', 'TPR.G15769' => 'tpr', 'TPR.G16504' => 'tpr', 'TPR.G16506' => 'tpr', 'TPR.G24345' => 'tpr', 'TPR.G26666' => 'tpr', 'TPR.G27320' => 'tpr', 'TPR.G31819' => 'tpr', 'TPR.G38879' => 'tpr', 'TPR.G39015' => 'tpr', 'TPR.G8819' => 'tpr', 'TWI09G0924' => 'twi', 'TWI12G0811' => 'twi', 'TWI12G1294' => 'twi', 'TWI31G0150' => 'twi', 'TWI36G1262' => 'twi', 'TWI38G1287' => 'twi', 'TWI38G1633' => 'twi', 'TWI38G1982' => 'twi', 'TWI39G0116' => 'twi', 'TWI60G1011' => 'twi', 'TWI63G0171' => 'twi', 'TWI73G0839' => 'twi', 'TWI79G1511' => 'twi', 'unitig_0.g915' => 'ugi', 'unitig_0.g916' => 'ugi', 'unitig_21.g20219' => 'ugi', 'unitig_21.g20416' => 'ugi', 'unitig_578.g16132' => 'ugi', 'unitig_578.g16718' => 'ugi', 'unitig_62.g23481' => 'ugi', 'unitig_744.g24535' => 'ugi', 'unitig_749.g13525' => 'ugi', 'vmacro01248' => 'vma', 'vmacro02290' => 'vma', 'vmacro10946' => 'vma', 'vmacro11865' => 'vma', 'vmacro12493' => 'vma', 'vmacro17322' => 'vma', 'vmacro21599' => 'vma', 'vmacro23041' => 'vma', 'VMungo0251G0004' => 'vmu', 'VMungo0251G2639' => 'vmu', 'VMungo0251G2967' => 'vmu', 'VMungo0540G0864' => 'vmu', 'VMungo0540G1569' => 'vmu', 'VMungo0647G0317' => 'vmu', 'VMungo0720G1373' => 'vmu', 'VMungo0720G1508' => 'vmu', 'VMungo1080G0485' => 'vmu', 'VMungo1215G3177' => 'vmu', 'Zm00001eb112600' => 'zma', 'Zm00001eb120220' => 'zma', 'Zm00001eb153240' => 'zma', 'Zm00001eb168880' => 'zma', 'Zm00001eb213920' => 'zma', 'Zm00001eb228280' => 'zma', 'Zm00001eb254580' => 'zma', 'Zm00001eb272180' => 'zma', 'Zm00001eb293190' => 'zma', 'Zm00001eb322930' => 'zma', 'Zm00001eb353360' => 'zma', 'Zm00001eb353390' => 'zma', 'Zm00001eb353430' => 'zma', 'Zm00001eb353440' => 'zma', 'Zm00001eb353780' => 'zma' ), 'gf_id' => 'HOM05D000499', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000499' ), 'data_identifier' => 'HOM05D000499', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000499', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1066', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p29780' => 'bna', 'A02p33180' => 'bna', 'A03p16470' => 'bna', 'A03p66010' => 'bna', 'A04p25970' => 'bna', 'A06p01270' => 'bna', 'A06p46080' => 'bna', 'A07p11400' => 'bna', 'A08p01840' => 'bna', 'A08p08230' => 'bna', 'A08p25740' => 'bna', 'A09p32070' => 'bna', 'A09p37830' => 'bna', 'A09p42840' => 'bna', 'A09p42850' => 'bna', 'Aa31LG10G2060' => 'aar', 'Aa31LG2G7410' => 'aar', 'Aa31LG6G10200' => 'aar', 'Aa31LG6G16680' => 'aar', 'Aa31LG6G8470' => 'aar', 'Aa31LG9G12730' => 'aar', 'Aa31LG9G13680' => 'aar', 'Aa31LG9G14920' => 'aar', 'Aa31LG9G6650' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4977' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5467' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3254' => 'aag', 'Actinidia02578' => 'ach', 'Actinidia07693' => 'ach', 'Actinidia08413' => 'ach', 'Actinidia08414' => 'ach', 'Actinidia15289' => 'ach', 'Actinidia19871' => 'ach', 'Actinidia21475' => 'ach', 'Actinidia22576' => 'ach', 'Actinidia28327' => 'ach', 'Actinidia32491' => 'ach', 'Actinidia39463' => 'ach', 'Actinidia39571' => 'ach', 'Ah.01g013750' => 'amhyb', 'Ah.01g023210' => 'amhyb', 'Ah.04g164850' => 'amhyb', 'Ah.05g178060' => 'amhyb', 'Ah.07g204270' => 'amhyb', 'Ah.07g208480' => 'amhyb', 'Ah.09g237410' => 'amhyb', 'Ah.14g089460' => 'amhyb', 'AL1G41790' => 'aly', 'AL1G49050' => 'aly', 'AL1G53810' => 'aly', 'AL1G61400' => 'aly', 'AL4G18580' => 'aly', 'AL5G12510' => 'aly', 'AL5G12540' => 'aly', 'AL6G43230' => 'aly', 'AL7G10370' => 'aly', 'AL7G19250' => 'aly', 'AL8G12240' => 'aly', 'AL8G18540' => 'aly', 'Aqoxy1G02409' => 'aox', 'Aqoxy2G03993' => 'aox', 'Aqoxy3G03357' => 'aox', 'Aqoxy4G00785' => 'aox', 'Aqoxy5G02598' => 'aox', 'Aqoxy6G00132' => 'aox', 'Aqoxy7G01776' => 'aox', 'Aqoxy7G02316' => 'aox', 'Aqoxy7G03973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.12AFKW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B8730' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27IQR1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3F75VG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3RE0GA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41TCQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.527VTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FIR39' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5W8UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DA38EV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ63HS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H1I32C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HC27T5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4M8AP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7N3CZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9UVDZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LS1NQA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT1D4B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SKC4TM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCFV76' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF9Q1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQWD9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1ZM88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WE07RT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YCK7VH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJE6Q6' => 'arhy', 'AT1G28240' => 'ath', 'AT1G34550' => 'ath', 'AT1G53040' => 'ath', 'AT2G02910' => 'ath', 'AT4G09630' => 'ath', 'AT4G38500' => 'ath', 'AT5G42660' => 'ath', 'AT5G46220' => 'ath', 'ATR0152G026' => 'atr', 'ATR0564G343' => 'atr', 'ATR0706G151' => 'atr', 'ATR0733G207' => 'atr', 'ATR0751G234' => 'atr', 'ATR0807G048' => 'atr', 'ATR1091G084' => 'atr', 'Atru.chr10.1229' => 'acertr', 'Atru.chr10.1230' => 'acertr', 'Atru.chr10.1874' => 'acertr', 'Atru.chr11.1808' => 'acertr', 'Atru.chr13.1795' => 'acertr', 'Atru.chr13.570' => 'acertr', 'Atru.chr2.2608' => 'acertr', 'Atru.chr2.2609' => 'acertr', 'Atru.chr5.3428' => 'acertr', 'Atru.chr8.1171' => 'acertr', 'AUR62004651' => 'cqu', 'AUR62008675' => 'cqu', 'AUR62010014' => 'cqu', 'AUR62013004' => 'cqu', 'AUR62014825' => 'cqu', 'AUR62015015' => 'cqu', 'AUR62015151' => 'cqu', 'AUR62017020' => 'cqu', 'AUR62019422' => 'cqu', 'AUR62023570' => 'cqu', 'AUR62025571' => 'cqu', 'AUR62029098' => 'cqu', 'AUR62033863' => 'cqu', 'AUR62034296' => 'cqu', 'AUR62040075' => 'cqu', 'BcaB02g07334' => 'bca', 'BcaB02g10575' => 'bca', 'BcaB03g12119' => 'bca', 'BcaB03g12120' => 'bca', 'BcaB03g13945' => 'bca', 'BcaB04g17123' => 'bca', 'BcaB04g17867' => 'bca', 'BcaB04g19839' => 'bca', 'BcaB07g30317' => 'bca', 'BcaB07g32432' => 'bca', 'BcaB07g33362' => 'bca', 'BcaB08g36611' => 'bca', 'BcaC01g00028' => 'bca', 'BcaC01g01356' => 'bca', 'BcaC01g02034' => 'bca', 'BcaC01g06051' => 'bca', 'BcaC03g16839' => 'bca', 'BcaC03g17176' => 'bca', 'BcaC05g26829' => 'bca', 'BcaC06g31490' => 'bca', 'BcaC06g35344' => 'bca', 'BcaC06g36570' => 'bca', 'BcaC07g37537' => 'bca', 'BcaC08g43491' => 'bca', 'BcaC08g43773' => 'bca', 'BcaNung00234' => 'bca', 'BcaNung01982' => 'bca', 'BcaNung03707' => 'bca', 'BcaNung06454' => 'bca', 'BolC2t10762H' => 'bol', 'BolC2t11191H' => 'bol', 'BolC3t14322H' => 'bol', 'BolC3t19747H' => 'bol', 'BolC3t21425H' => 'bol', 'BolC4t27800H' => 'bol', 'BolC5t31423H' => 'bol', 'BolC6t35951H' => 'bol', 'BolC6t36282H' => 'bol', 'BolC7t40678H' => 'bol', 'BolC7t40679H' => 'bol', 'BolC7t42222H' => 'bol', 'BolC7t43492H' => 'bol', 'BolC7t46785H' => 'bol', 'BolC8t47853H' => 'bol', 'BolC9t56805H' => 'bol', 'BraA02t08000Z' => 'bra', 'BraA02t08341Z' => 'bra', 'BraA03t10936Z' => 'bra', 'BraA03t15657Z' => 'bra', 'BraA04t18100Z' => 'bra', 'BraA05t20523Z' => 'bra', 'BraA06t23353Z' => 'bra', 'BraA06t27473Z' => 'bra', 'BraA06t27769Z' => 'bra', 'BraA07t28928Z' => 'bra', 'BraA08t32236Z' => 'bra', 'BraA08t32841Z' => 'bra', 'BraA08t34524Z' => 'bra', 'BraA09t38742Z' => 'bra', 'BraA09t39295Z' => 'bra', 'C02p47180' => 'bna', 'C02p50990' => 'bna', 'C03p19360' => 'bna', 'C03p74950' => 'bna', 'C03p91000' => 'bna', 'C04p63260' => 'bna', 'C05p27050' => 'bna', 'C06p08750' => 'bna', 'C06p11490' => 'bna', 'C07p02820' => 'bna', 'C07p17180' => 'bna', 'C07p29440' => 'bna', 'C07p63730' => 'bna', 'C09p39260' => 'bna', 'CAN.G1164.34' => 'can', 'CAN.G1164.39' => 'can', 'CAN.G1530.3' => 'can', 'CAN.G162.61' => 'can', 'CAN.G176.6' => 'can', 'CAN.G289.49' => 'can', 'CAN.G370.21' => 'can', 'CAN.G370.22' => 'can', 'CAN.G371.117' => 'can', 'CAN.G58.37' => 'can', 'CAN.G588.98' => 'can', 'CANSAT21G2266' => 'cansat', 'CANSAT25G2799' => 'cansat', 'CANSAT35G0862' => 'cansat', 'CANSAT35G1704' => 'cansat', 'CANSAT35G1760' => 'cansat', 'CANSAT56G3971' => 'cansat', 'CANSAT56G4116' => 'cansat', 'CANSAT80G1259' => 'cansat', 'CARHR027730' => 'chi', 'CARHR033880' => 'chi', 'CARHR043270' => 'chi', 'CARHR145330' => 'chi', 'CARHR145340' => 'chi', 'CARHR175570' => 'chi', 'CARHR181570' => 'chi', 'CARHR258470' => 'chi', 'CARHR260490' => 'chi', 'CARHR294220' => 'chi', 'Carub.0001s2668' => 'cru', 'Carub.0001s3257' => 'cru', 'Carub.0001s4220' => 'cru', 'Carub.0005s0179' => 'cru', 'Carub.0006s2807' => 'cru', 'Carub.0007s0039' => 'cru', 'Carub.0008s0169' => 'cru', 'Carub.0008s0636' => 'cru', 'Ca_00338_v3' => 'car', 'Ca_00542_v3' => 'car', 'Ca_01844_v3' => 'car', 'Ca_10611_v3' => 'car', 'Ca_13326_v3' => 'car', 'Ca_17944_v3' => 'car', 'Ca_18546_v3' => 'car', 'Ca_24219_v3' => 'car', 'Ca_29972_v3' => 'car', 'CBR_g3681' => 'cbr', 'CBR_g40021' => 'cbr', 'Cc01_g08140' => 'ccan', 'Cc02_g13410' => 'ccan', 'Cc02_g37480' => 'ccan', 'Cc05_g12030' => 'ccan', 'Cc09_g03370' => 'ccan', 'Cc09_g10300' => 'ccan', 'Cc10_g03530' => 'ccan', 'Cc10_g11380' => 'ccan', 'CDE01G0176' => 'cde', 'CDE02G0675' => 'cde', 'CDE02G0942' => 'cde', 'CDE02G1153' => 'cde', 'CDE02G4177' => 'cde', 'CDE04G2117' => 'cde', 'CDE04G2736' => 'cde', 'CDE08G1161' => 'cde', 'CDE09G1238' => 'cde', 'Cfa000467' => 'cfa', 'Cfa000947' => 'cfa', 'Cfa004969' => 'cfa', 'Cfa005284' => 'cfa', 'Cfa008993' => 'cfa', 'Cfa018187' => 'cfa', 'Cfa018454' => 'cfa', 'Cfa020585' => 'cfa', 'Ciclev10000424m.g' => 'ccl', 'Ciclev10003605m.g' => 'ccl', 'Ciclev10007828m.g' => 'ccl', 'Ciclev10014620m.g' => 'ccl', 'Ciclev10015169m.g' => 'ccl', 'Ciclev10018291m.g' => 'ccl', 'Ciclev10028256m.g' => 'ccl', 'Ciclev10033822m.g' => 'ccl', 'CiPaw.05G060300' => 'cil', 'CiPaw.05G085000' => 'cil', 'CiPaw.06G083700' => 'cil', 'CiPaw.06G120300' => 'cil', 'CiPaw.09G060500' => 'cil', 'CiPaw.09G123800' => 'cil', 'CiPaw.11G169700' => 'cil', 'CiPaw.12G118300' => 'cil', 'CiPaw.15G071000' => 'cil', 'CiPaw.15G081900' => 'cil', 'ClCG01G024610' => 'cla', 'ClCG03G006070' => 'cla', 'ClCG05G019250' => 'cla', 'ClCG09G009500' => 'cla', 'ClCG11G008200' => 'cla', 'ClCG11G018080' => 'cla', 'COL.COLO4_17373' => 'col', 'COL.COLO4_22994' => 'col', 'COL.COLO4_26389' => 'col', 'COL.COLO4_27170' => 'col', 'COL.COLO4_31074' => 'col', 'COL.COLO4_31465' => 'col', 'COL.COLO4_36438' => 'col', 'COL.COLO4_36439' => 'col', 'Cpa.g.c38781' => 'cpa', 'Cpa.g.sc128.12' => 'cpa', 'Cpa.g.sc166.7' => 'cpa', 'Cpa.g.sc166.8' => 'cpa', 'Cpa.g.sc20.111' => 'cpa', 'Cpa.g.sc27.31' => 'cpa', 'Cpa.g.sc64.36' => 'cpa', 'Cpa.g.sc64.37' => 'cpa', 'Cpa.g.sc66.49' => 'cpa', 'Cpa.g.sc80.64' => 'cpa', 'CsaV3_1G012320' => 'csa', 'CsaV3_2G008480' => 'csa', 'CsaV3_2G033450' => 'csa', 'CsaV3_3G044830' => 'csa', 'CsaV3_4G033710' => 'csa', 'CsaV3_6G051730' => 'csa', 'CsaV3_7G025350' => 'csa', 'CSS0001067' => 'camsi', 'CSS0005996' => 'camsi', 'CSS0006590' => 'camsi', 'CSS0009673' => 'camsi', 'CSS0010201' => 'camsi', 'CSS0010549' => 'camsi', 'CSS0011364' => 'camsi', 'CSS0014473' => 'camsi', 'CSS0014961' => 'camsi', 'CSS0020191' => 'camsi', 'CSS0021165' => 'camsi', 'CSS0022306' => 'camsi', 'CSS0030591' => 'camsi', 'CSS0030696' => 'camsi', 'CSS0032653' => 'camsi', 'CSS0037487' => 'camsi', 'CSS0041102' => 'camsi', 'CSS0041261' => 'camsi', 'CSS0046246' => 'camsi', 'CSS0049256' => 'camsi', 'DCAR_004075' => 'dca', 'DCAR_011538' => 'dca', 'DCAR_019553' => 'dca', 'DCAR_020952' => 'dca', 'DCAR_021739' => 'dca', 'DCAR_027407' => 'dca', 'DCAR_027913' => 'dca', 'DCAR_028066' => 'dca', 'Dinv05899' => 'din', 'Dinv07563' => 'din', 'Dinv08010' => 'din', 'Dinv14125' => 'din', 'Dinv20172' => 'din', 'Dinv30743' => 'din', 'Dinv31229' => 'din', 'Dinv34162' => 'din', 'Dinv36028' => 'din', 'Dinv39368' => 'din', 'Dinv40565' => 'din', 'Dinv41706' => 'din', 'Duzib052G0089' => 'dzi', 'Duzib116G0641' => 'dzi', 'Duzib132G0069' => 'dzi', 'Duzib132G1219' => 'dzi', 'Duzib147G0278' => 'dzi', 'Duzib160G0480' => 'dzi', 'Duzib170G0661' => 'dzi', 'Duzib177G0591' => 'dzi', 'Duzib187G1353' => 'dzi', 'Duzib192G0858' => 'dzi', 'Duzib192G0883' => 'dzi', 'Duzib213G0506' => 'dzi', 'Duzib235G0289' => 'dzi', 'Duzib251G0422' => 'dzi', 'ECA232G3898' => 'eca', 'ECA233G5950' => 'eca', 'ECA234G1699' => 'eca', 'ECA234G2421' => 'eca', 'ECA236G0426' => 'eca', 'ECA236G4331' => 'eca', 'ECA248G2573' => 'eca', 'EL10Ac1g00077' => 'bvu', 'EL10Ac1g01746' => 'bvu', 'EL10Ac2g03464' => 'bvu', 'EL10Ac4g08176' => 'bvu', 'EL10Ac7g17521' => 'bvu', 'EL10Ac8g20386' => 'bvu', 'EL10Ac9g21343' => 'bvu', 'EL10Ac9g22688' => 'bvu', 'Eucgr.B03434' => 'egr', 'Eucgr.D00618' => 'egr', 'Eucgr.E02395' => 'egr', 'Eucgr.F01129' => 'egr', 'Eucgr.F02622' => 'egr', 'Eucgr.F04207' => 'egr', 'FAN01G0570' => 'fan', 'FAN03G3351' => 'fan', 'FAN06G3702' => 'fan', 'FAN07G2149' => 'fan', 'FAN10G3758' => 'fan', 'FAN11G1170' => 'fan', 'FAN11G2050' => 'fan', 'FAN11G2724' => 'fan', 'FAN12G1700' => 'fan', 'FAN12G2028' => 'fan', 'FAN15G1160' => 'fan', 'FAN15G3063' => 'fan', 'FAN16G2540' => 'fan', 'FAN16G3077' => 'fan', 'FAN16G3624' => 'fan', 'FAN17G0221' => 'fan', 'FAN20G2492' => 'fan', 'FAN20G2905' => 'fan', 'FAN21G0548' => 'fan', 'FAN21G1300' => 'fan', 'FAN22G0077' => 'fan', 'FAN22G1315' => 'fan', 'FAN24G1280' => 'fan', 'FAN24G1445' => 'fan', 'FAN24G3527' => 'fan', 'FAN25G0464' => 'fan', 'FAN25G2885' => 'fan', 'FAN25G3270' => 'fan', 'FAN27G1101' => 'fan', 'FAN27G2846' => 'fan', 'FAN27G3524' => 'fan', 'FvH4_2g11770' => 'fve', 'FvH4_2g15630' => 'fve', 'FvH4_3g05570' => 'fve', 'FvH4_3g09110' => 'fve', 'FvH4_3g19940' => 'fve', 'FvH4_4g04821' => 'fve', 'FvH4_4g31480' => 'fve', 'FvH4_7g01740' => 'fve', 'Glyma.05G130400' => 'gma', 'Glyma.05G156400' => 'gma', 'Glyma.07G197000' => 'gma', 'Glyma.08G085151' => 'gma', 'Glyma.08G114500' => 'gma', 'Glyma.08G300400' => 'gma', 'Glyma.10G215800' => 'gma', 'Glyma.12G224400' => 'gma', 'Glyma.13G179300' => 'gma', 'Glyma.13G218151' => 'gma', 'Glyma.13G238800' => 'gma', 'Glyma.13G276900' => 'gma', 'Glyma.14G078200' => 'gma', 'Glyma.15G074500' => 'gma', 'Glyma.15G094100' => 'gma', 'Glyma.17G247200' => 'gma', 'Glyma.18G120100' => 'gma', 'Glyma.20G176000' => 'gma', 'Gohir.A01G063600' => 'ghi', 'Gohir.A01G170301' => 'ghi', 'Gohir.A02G060500' => 'ghi', 'Gohir.A05G133850' => 'ghi', 'Gohir.A05G161400' => 'ghi', 'Gohir.A06G012900' => 'ghi', 'Gohir.A06G035901' => 'ghi', 'Gohir.A06G127100' => 'ghi', 'Gohir.A06G210500' => 'ghi', 'Gohir.A08G008650' => 'ghi', 'Gohir.A09G072700' => 'ghi', 'Gohir.A09G088301' => 'ghi', 'Gohir.A10G040600' => 'ghi', 'Gohir.A12G036300' => 'ghi', 'Gohir.A12G143350' => 'ghi', 'Gohir.A12G165500' => 'ghi', 'Gohir.A13G145700' => 'ghi', 'Gohir.D01G050000' => 'ghi', 'Gohir.D01G051366' => 'ghi', 'Gohir.D01G161350' => 'ghi', 'Gohir.D02G065900' => 'ghi', 'Gohir.D05G164200' => 'ghi', 'Gohir.D05G355500' => 'ghi', 'Gohir.D06G010400' => 'ghi', 'Gohir.D06G111250' => 'ghi', 'Gohir.D06G132000' => 'ghi', 'Gohir.D06G210500' => 'ghi', 'Gohir.D07G165675' => 'ghi', 'Gohir.D08G062240' => 'ghi', 'Gohir.D08G086101' => 'ghi', 'Gohir.D08G138060' => 'ghi', 'Gohir.D09G072300' => 'ghi', 'Gohir.D10G041400' => 'ghi', 'Gohir.D11G191020' => 'ghi', 'Gohir.D11G212066' => 'ghi', 'Gohir.D12G036300' => 'ghi', 'Gohir.D12G168600' => 'ghi', 'Gohir.D13G150600' => 'ghi', 'Gorai.001G057300' => 'gra', 'Gorai.002G069900' => 'gra', 'Gorai.002G200000' => 'gra', 'Gorai.003G067600' => 'gra', 'Gorai.005G074800' => 'gra', 'Gorai.006G087300' => 'gra', 'Gorai.008G037500' => 'gra', 'Gorai.008G181400' => 'gra', 'Gorai.009G169400' => 'gra', 'Gorai.009G387900' => 'gra', 'Gorai.010G013300' => 'gra', 'Gorai.010G153800' => 'gra', 'Gorai.010G255800' => 'gra', 'Gorai.011G043700' => 'gra', 'Gorai.011G198900' => 'gra', 'Gorai.013G168400' => 'gra', 'GSVIVG01005212001' => 'vvi', 'GSVIVG01006163001' => 'vvi', 'GSVIVG01009625001' => 'vvi', 'GSVIVG01014338001' => 'vvi', 'GSVIVG01020005001' => 'vvi', 'GSVIVG01021450001' => 'vvi', 'GSVIVG01023975001' => 'vvi', 'GSVIVG01034490001' => 'vvi', 'HanXRQChr04g0112071' => 'han', 'HanXRQChr05g0131151' => 'han', 'HanXRQChr09g0262371' => 'han', 'HanXRQChr09g0268401' => 'han', 'HanXRQChr10g0279241' => 'han', 'HanXRQChr10g0297961' => 'han', 'HanXRQChr11g0326231' => 'han', 'HanXRQChr11g0328471' => 'han', 'HanXRQChr16g0507941' => 'han', 'HanXRQChr17g0560211' => 'han', 'Haze_02108' => 'cav', 'Haze_02428' => 'cav', 'Haze_05593' => 'cav', 'Haze_06448' => 'cav', 'Haze_09427' => 'cav', 'Haze_12022' => 'cav', 'Haze_17612' => 'cav', 'Haze_17928' => 'cav', 'Hma1.2p1_0032F.1_g019250' => 'hma', 'Hma1.2p1_0163F.1_g072690' => 'hma', 'Hma1.2p1_0265F.1_g106710' => 'hma', 'Hma1.2p1_0286F.1_g113970' => 'hma', 'Hma1.2p1_0363F.1_g136640' => 'hma', 'Hma1.2p1_0584F.1_g183470' => 'hma', 'Hma1.2p1_0885F.1_g232570' => 'hma', 'HPP92_006022' => 'vpl', 'HPP92_007320' => 'vpl', 'HPP92_011521' => 'vpl', 'HPP92_019387' => 'vpl', 'HPP92_024038' => 'vpl', 'Hund05891' => 'sun', 'Hund06450' => 'sun', 'Hund12053' => 'sun', 'Hund16800' => 'sun', 'Hund21222' => 'sun', 'Hund22896' => 'sun', 'Hund23746' => 'sun', 'Hund27083' => 'sun', 'Lalb_Chr02g0141831' => 'lal', 'Lalb_Chr02g0141841' => 'lal', 'Lalb_Chr05g0220411' => 'lal', 'Lalb_Chr06g0162081' => 'lal', 'Lalb_Chr09g0327651' => 'lal', 'Lalb_Chr13g0295051' => 'lal', 'Lalb_Chr15g0086801' => 'lal', 'Lalb_Chr16g0383781' => 'lal', 'Lalb_Chr16g0383791' => 'lal', 'Lalb_Chr18g0055441' => 'lal', 'Lalb_Chr18g0059611' => 'lal', 'Lalb_Chr20g0109661' => 'lal', 'Lalb_Chr20g0109831' => 'lal', 'Lalb_Chr20g0121871' => 'lal', 'Lalb_Chr22g0355361' => 'lal', 'Lalb_Chr25g0286371' => 'lal', 'Lj1A1187G43' => 'lonja', 'Lj1A1205T50' => 'lonja', 'Lj1A800G33' => 'lonja', 'Lj1C1187T7' => 'lonja', 'Lj1C843T11' => 'lonja', 'Lj1g0010940' => 'lja', 'Lj2A288T69' => 'lonja', 'Lj3g0024276' => 'lja', 'Lj4A47T76' => 'lonja', 'Lj4g0005805' => 'lja', 'Lj4g0006097' => 'lja', 'Lj4g0008528' => 'lja', 'Lj4g0024907' => 'lja', 'Lj5g0012472' => 'lja', 'Lj5g0018648' => 'lja', 'Lj6C789G1' => 'lonja', 'Lj6g0004000' => 'lja', 'Lj7A292G67' => 'lonja', 'Lj7A292T64' => 'lonja', 'Lj9A400T58' => 'lonja', 'Lsat_1_v5_gn_1_126181' => 'lsa', 'Lsat_1_v5_gn_4_123041' => 'lsa', 'Lsat_1_v5_gn_4_133620' => 'lsa', 'Lsat_1_v5_gn_4_53221' => 'lsa', 'Lsat_1_v5_gn_4_71961' => 'lsa', 'Lsat_1_v5_gn_7_105241' => 'lsa', 'Lsat_1_v5_gn_7_21361' => 'lsa', 'Lsat_1_v5_gn_7_28860' => 'lsa', 'Lsat_1_v5_gn_7_31260' => 'lsa', 'Lsat_1_v5_gn_8_52801' => 'lsa', 'Manes.02G191400' => 'mes', 'Manes.03G110100' => 'mes', 'Manes.04G071100' => 'mes', 'Manes.05G100500' => 'mes', 'Manes.05G164700' => 'mes', 'Manes.15G087000' => 'mes', 'Manes.15G121500' => 'mes', 'Manes.16G028300' => 'mes', 'Manes.17G046100' => 'mes', 'Manes.17G069800' => 'mes', 'Manes.18G100500' => 'mes', 'Mapoly0002s0109' => 'mpo', 'Mapoly0024s0007' => 'mpo', 'Mapoly0089s0032' => 'mpo', 'MBI04_g42241_MAGBIO' => 'mbi', 'MBI05_g11988_MAGBIO' => 'mbi', 'MBI05_g35452_MAGBIO' => 'mbi', 'MBI07_g30179_MAGBIO' => 'mbi', 'MBI07_g35859_MAGBIO' => 'mbi', 'MBI07_g35860_MAGBIO' => 'mbi', 'MBI07_g37166_MAGBIO' => 'mbi', 'MBI08_g18172_MAGBIO' => 'mbi', 'MBI09_g08441_MAGBIO' => 'mbi', 'MBI13_g01676_MAGBIO' => 'mbi', 'MBI14_g42955_MAGBIO' => 'mbi', 'MBI16_g13161_MAGBIO' => 'mbi', 'MBI17_g27204_MAGBIO' => 'mbi', 'MBI19_g21595_MAGBIO' => 'mbi', 'MD00G1148400' => 'mdo', 'MD02G1301200' => 'mdo', 'MD03G1227800' => 'mdo', 'MD05G1041100' => 'mdo', 'MD05G1124800' => 'mdo', 'MD05G1284000' => 'mdo', 'MD05G1338800' => 'mdo', 'MD05G1338900' => 'mdo', 'MD07G1022800' => 'mdo', 'MD10G1047500' => 'mdo', 'MD10G1127500' => 'mdo', 'MD10G1262300' => 'mdo', 'MD10G1293800' => 'mdo', 'MD16G1074300' => 'mdo', 'Medtr1g021670' => 'mtr', 'Medtr1g096320' => 'mtr', 'Medtr2g013690' => 'mtr', 'Medtr2g019450' => 'mtr', 'Medtr2g085170' => 'mtr', 'Medtr4g088785' => 'mtr', 'Medtr8g055930' => 'mtr', 'Medtr8g085850' => 'mtr', 'MELO3C002605.2' => 'cme', 'MELO3C003891.2' => 'cme', 'MELO3C004012.2' => 'cme', 'MELO3C007134.2' => 'cme', 'MELO3C008118.2' => 'cme', 'MELO3C016700.2' => 'cme', 'MELO3C024127.2' => 'cme', 'MELO3C033361.2' => 'cme', 'MELO3C033362.2' => 'cme', 'Migut.C00430' => 'egut', 'Migut.C01246' => 'egut', 'Migut.E00101' => 'egut', 'Migut.H01486' => 'egut', 'Migut.H01939' => 'egut', 'Migut.K00360' => 'egut', 'Migut.M00910' => 'egut', 'Migut.M01139' => 'egut', 'Migut.N02677' => 'egut', 'MSTRG.13252' => 'ama', 'MSTRG.14701' => 'ama', 'MSTRG.1521' => 'ama', 'MSTRG.15884' => 'ama', 'MSTRG.16242' => 'ama', 'MSTRG.22285' => 'ama', 'MSTRG.22444' => 'ama', 'MSTRG.2349' => 'ama', 'MSTRG.26308' => 'ama', 'MSTRG.28296' => 'ama', 'MSTRG.9895' => 'ama', 'Nitab4.5_0000110g0060' => 'nta', 'Nitab4.5_0000420g0130' => 'nta', 'Nitab4.5_0000422g0030' => 'nta', 'Nitab4.5_0000560g0180' => 'nta', 'Nitab4.5_0000703g0100' => 'nta', 'Nitab4.5_0000786g0200' => 'nta', 'Nitab4.5_0001336g0020' => 'nta', 'Nitab4.5_0001796g0030' => 'nta', 'Nitab4.5_0003348g0060' => 'nta', 'Nitab4.5_0003698g0040' => 'nta', 'Nitab4.5_0003942g0090' => 'nta', 'Nitab4.5_0004775g0070' => 'nta', 'Nitab4.5_0004864g0030' => 'nta', 'Nitab4.5_0005615g0020' => 'nta', 'Nitab4.5_0009288g0030' => 'nta', 'Nitab4.5_0009341g0010' => 'nta', 'Nitab4.5_0009535g0010' => 'nta', 'Nn1g03995' => 'nnu', 'Nn1g04100' => 'nnu', 'Nn1g06530' => 'nnu', 'Nn3g16404' => 'nnu', 'Nn3g17212' => 'nnu', 'Nn3g20776' => 'nnu', 'Nn3g21923' => 'nnu', 'Nn5g27737' => 'nnu', 'Nn5g29461' => 'nnu', 'Nn7g38355' => 'nnu', 'Nn8g39873' => 'nnu', 'Oeu000548.2' => 'oeu', 'Oeu004672.1' => 'oeu', 'Oeu015605.2' => 'oeu', 'Oeu016092.1' => 'oeu', 'Oeu017879.3' => 'oeu', 'Oeu024910.1' => 'oeu', 'Oeu028965.1' => 'oeu', 'Oeu031269.1' => 'oeu', 'Oeu031270.1' => 'oeu', 'Oeu032535.1' => 'oeu', 'Oeu034151.1' => 'oeu', 'Oeu034152.1' => 'oeu', 'Oeu034588.2' => 'oeu', 'Oeu050846.1' => 'oeu', 'Oeu050849.2' => 'oeu', 'Oeu051063.2' => 'oeu', 'Oeu052368.1' => 'oeu', 'Oeu052370.1' => 'oeu', 'Os01g0210400' => 'osa', 'Os01g0304300' => 'osa', 'Os01g0749100' => 'osa', 'Os02g0745800' => 'osa', 'Os03g0769050' => 'osa', 'Os05g0531500' => 'osa', 'Os06g0724300' => 'osa', 'Os11g0198100' => 'osa', 'Peaxi162Scf00069g01425' => 'pax', 'Peaxi162Scf00280g00811' => 'pax', 'Peaxi162Scf00310g00615' => 'pax', 'Peaxi162Scf00362g00542' => 'pax', 'Peaxi162Scf00461g00310' => 'pax', 'Peaxi162Scf00530g00118' => 'pax', 'Peaxi162Scf00541g00057' => 'pax', 'Peaxi162Scf00661g00017' => 'pax', 'Peaxi162Scf00926g00027' => 'pax', 'Peaxi162Scf01064g00263' => 'pax', 'Peaxi162Scf01211g00135' => 'pax', 'PGR004G2336' => 'pgr', 'PGR042G0327' => 'pgr', 'PGR042G1957' => 'pgr', 'PGR042G2003' => 'pgr', 'PGR042G3929' => 'pgr', 'PGR083G1137' => 'pgr', 'PGR083G1364' => 'pgr', 'PGSC0003DMG400003381' => 'stu', 'PGSC0003DMG400003417' => 'stu', 'PGSC0003DMG400008981' => 'stu', 'PGSC0003DMG400012417' => 'stu', 'PGSC0003DMG400012823' => 'stu', 'PGSC0003DMG400016885' => 'stu', 'PGSC0003DMG400022812' => 'stu', 'PGSC0003DMG400029726' => 'stu', 'PGSC0003DMG401009243' => 'stu', 'PGSC0003DMG401031505' => 'stu', 'PGSC0003DMG402031505' => 'stu', 'Phvul.001G017600' => 'pvu', 'Phvul.002G193500' => 'pvu', 'Phvul.002G228900' => 'pvu', 'Phvul.002G236800' => 'pvu', 'Phvul.003G049500' => 'pvu', 'Phvul.005G072000' => 'pvu', 'Phvul.006G164800' => 'pvu', 'Phvul.006G185100' => 'pvu', 'Phvul.007G090000' => 'pvu', 'Potri.001G399800' => 'ptr', 'Potri.002G149900' => 'ptr', 'Potri.004G044100' => 'ptr', 'Potri.004G177600' => 'ptr', 'Potri.009G138000' => 'ptr', 'Potri.010G094000' => 'ptr', 'Potri.011G053000' => 'ptr', 'Potri.011G119300' => 'ptr', 'Potri.013G113700' => 'ptr', 'Potri.018G107800' => 'ptr', 'Potri.019G084100' => 'ptr', 'Pp3c14_23720' => 'ppa', 'Pp3c16_6340' => 'ppa', 'Pp3c23_13420' => 'ppa', 'Pp3c24_2740' => 'ppa', 'Pp3c25_860' => 'ppa', 'Pp3c8_21750' => 'ppa', 'Prupe.1G273000' => 'ppe', 'Prupe.1G273700' => 'ppe', 'Prupe.1G274100' => 'ppe', 'Prupe.2G023300' => 'ppe', 'Prupe.4G048000' => 'ppe', 'Prupe.4G080400' => 'ppe', 'Prupe.4G181200' => 'ppe', 'Prupe.8G056900' => 'ppe', 'Prupe.8G168700' => 'ppe', 'Psat1g189080' => 'psa', 'Psat1g204760' => 'psa', 'Psat4g175560' => 'psa', 'Psat4g177720' => 'psa', 'Psat5g244240' => 'psa', 'Psat6g010720' => 'psa', 'Psat6g187200' => 'psa', 'Psat7g072040' => 'psa', 'PSO017G3501' => 'pso', 'PSO063G2148' => 'pso', 'PSO063G5608' => 'pso', 'PSO210G6392' => 'pso', 'PSO541G2319' => 'pso', 'PSO541G2836' => 'pso', 'PSO541G4012' => 'pso', 'PSO541G6253' => 'pso', 'PSO675G0580' => 'pso', 'PSO675G0856' => 'pso', 'PSO675G5635' => 'pso', 'PSO675G9157' => 'pso', 'PSO832G1660' => 'pso', 'PSO832G1969' => 'pso', 'QL02p007186' => 'qlo', 'QL02p033904' => 'qlo', 'QL03p064391' => 'qlo', 'QL05p040593' => 'qlo', 'QL05p058242' => 'qlo', 'QL08p021825' => 'qlo', 'QL11p004981' => 'qlo', 'RcHm_v2.0_Chr1g0318301' => 'rch', 'RcHm_v2.0_Chr4g0418501' => 'rch', 'RcHm_v2.0_Chr4g0439971' => 'rch', 'RcHm_v2.0_Chr5g0008541' => 'rch', 'RcHm_v2.0_Chr5g0014101' => 'rch', 'RcHm_v2.0_Chr5g0014131' => 'rch', 'RcHm_v2.0_Chr5g0033621' => 'rch', 'RcHm_v2.0_Chr6g0272041' => 'rch', 'RcHm_v2.0_Chr6g0278831' => 'rch', 'Rhsim02G0130400' => 'rsi', 'Rhsim02G0171100' => 'rsi', 'Rhsim05G0053000' => 'rsi', 'Rhsim05G0053100' => 'rsi', 'Rhsim06G0096500' => 'rsi', 'Rhsim06G0096600' => 'rsi', 'Rhsim06G0199100' => 'rsi', 'Rhsim12G0062300' => 'rsi', 'Rhsim12G0062800' => 'rsi', 'Sabra02G0118600' => 'sbr', 'Sabra04G0027300' => 'sbr', 'Sabra04G0119500' => 'sbr', 'Sabra08G0112500' => 'sbr', 'Sabra11G0036800' => 'sbr', 'Sabra11G0103800' => 'sbr', 'Sabra13G0096300' => 'sbr', 'Sabra16G0262300' => 'sbr', 'Sabra18G0091700' => 'sbr', 'Sabra19G0095400' => 'sbr', 'SalBow6G3080' => 'sbo', 'SalBow7G1157' => 'sbo', 'SalBow7G2123' => 'sbo', 'SalBow7G2285' => 'sbo', 'SalBow7G3537' => 'sbo', 'SalBow8G2947' => 'sbo', 'SalBow8G4463' => 'sbo', 'SalBow8G5466' => 'sbo', 'Sc01g0001750' => 'sci', 'Sc02g0006640' => 'sci', 'Sc02g0006670' => 'sci', 'Sc04g0008220' => 'sci', 'Sc05g0006190' => 'sci', 'Sc08g0002760' => 'sci', 'Sc17g0006170' => 'sci', 'Sc22g0002050' => 'sci', 'Sc23g0001190' => 'sci', 'Sc24g0000980' => 'sci', 'Sed0006245' => 'sed', 'Sed0007543' => 'sed', 'Sed0009411' => 'sed', 'Sed0010765' => 'sed', 'Sed0012944' => 'sed', 'Sed0014682' => 'sed', 'Sed0016174' => 'sed', 'Sed0016796' => 'sed', 'Sed0020317' => 'sed', 'Sed0021467' => 'sed', 'SEGI_01316' => 'sgi', 'SEGI_03374' => 'sgi', 'SEGI_16265' => 'sgi', 'SEGI_18569' => 'sgi', 'SEGI_20351' => 'sgi', 'SEGI_26395' => 'sgi', 'SEGI_29469' => 'sgi', 'SEGI_34771' => 'sgi', 'SEGI_36769' => 'sgi', 'SEGI_37139' => 'sgi', 'SGA_v2.0_scaffold100G29687' => 'sas', 'SGA_v2.0_scaffold118G32472' => 'sas', 'SGA_v2.0_scaffold14G07051' => 'sas', 'SGA_v2.0_scaffold183G39845' => 'sas', 'SGA_v2.0_scaffold1G00174' => 'sas', 'SGA_v2.0_scaffold22G09714' => 'sas', 'SGA_v2.0_scaffold333G48992' => 'sas', 'SGA_v2.0_scaffold46G17491' => 'sas', 'SGA_v2.0_scaffold49G18294' => 'sas', 'SGA_v2.0_scaffold63G21658' => 'sas', 'SHI01741' => 'shi', 'SHI05771' => 'shi', 'SHI18077' => 'shi', 'SHI20525' => 'shi', 'SHI20527' => 'shi', 'SHI20528' => 'shi', 'SMO172G0185' => 'smo', 'SMO198G0020' => 'smo', 'SMO351G0006' => 'smo', 'SMO356G0118' => 'smo', 'SMO358G0296' => 'smo', 'SMO367G0079' => 'smo', 'SMO367G1277' => 'smo', 'Solyc01g014220.3' => 'sly', 'Solyc01g111770.2' => 'sly', 'Solyc02g078180.3' => 'sly', 'Solyc03g006430.3' => 'sly', 'Solyc03g006456.1' => 'sly', 'Solyc03g079860.2' => 'sly', 'Solyc04g079770.3' => 'sly', 'Solyc05g007430.4' => 'sly', 'Solyc07g063150.3' => 'sly', 'Solyc08g016620.3' => 'sly', 'Solyc09g057590.3' => 'sly', 'Solyc09g057600.1' => 'sly', 'Solyc10g009050.3' => 'sly', 'Solyc11g017420.2' => 'sly', 'Sopen01g053810' => 'spe', 'Sopen02g023040' => 'spe', 'Sopen03g002440' => 'spe', 'Sopen04g033350' => 'spe', 'Sopen05g003310' => 'spe', 'Sopen07g004050' => 'spe', 'Sopen07g031340' => 'spe', 'Sopen08g006990' => 'spe', 'Sopen10g004830' => 'spe', 'Sopen11g009370' => 'spe', 'Sp1g24450' => 'spa', 'Sp1g29670' => 'spa', 'Sp1g39600' => 'spa', 'Sp2g11080' => 'spa', 'Sp2g13970' => 'spa', 'Sp4g16130' => 'spa', 'Sp6g13080' => 'spa', 'Sp7g37270' => 'spa', 'TAR371G0065' => 'tar', 'TAR376G0340' => 'tar', 'TAR376G0435' => 'tar', 'TAR381G0002' => 'tar', 'TAR381G1236' => 'tar', 'TAR624G0055' => 'tar', 'TAR624G0324' => 'tar', 'TAR624G0696' => 'tar', 'TAR624G0906' => 'tar', 'TAR625G0107' => 'tar', 'TAR626G0015' => 'tar', 'TAR626G1356' => 'tar', 'TAR627G0888' => 'tar', 'TAR628G0399' => 'tar', 'TAR628G1327' => 'tar', 'TAR629G2831' => 'tar', 'TAR629G2874' => 'tar', 'TAR633G1432' => 'tar', 'TAR633G2771' => 'tar', 'THA.LOC104803394' => 'tha', 'THA.LOC104805153' => 'tha', 'THA.LOC104806784' => 'tha', 'THA.LOC104810473' => 'tha', 'THA.LOC104813100' => 'tha', 'THA.LOC104814215' => 'tha', 'THA.LOC104815554' => 'tha', 'THA.LOC104820544' => 'tha', 'THA.LOC104824754' => 'tha', 'THA.LOC104827717' => 'tha', 'Thecc.02G031400' => 'tca', 'Thecc.02G055900' => 'tca', 'Thecc.02G350800' => 'tca', 'Thecc.06G150900' => 'tca', 'Thecc.06G186600' => 'tca', 'Thecc.07G089600' => 'tca', 'Thecc.08G020400' => 'tca', 'Thecc.08G182100' => 'tca', 'Thhalv10000873m.g' => 'esa', 'Thhalv10004185m.g' => 'esa', 'Thhalv10006981m.g' => 'esa', 'Thhalv10007204m.g' => 'esa', 'Thhalv10011374m.g' => 'esa', 'Thhalv10013482m.g' => 'esa', 'Thhalv10017801m.g' => 'esa', 'Thhalv10024983m.g' => 'esa', 'TPR.G12072' => 'tpr', 'TPR.G15769' => 'tpr', 'TPR.G16504' => 'tpr', 'TPR.G16506' => 'tpr', 'TPR.G24345' => 'tpr', 'TPR.G26666' => 'tpr', 'TPR.G27320' => 'tpr', 'TPR.G31819' => 'tpr', 'TPR.G38879' => 'tpr', 'TPR.G39015' => 'tpr', 'TPR.G8819' => 'tpr', 'TWI09G0924' => 'twi', 'TWI12G0811' => 'twi', 'TWI12G1294' => 'twi', 'TWI31G0150' => 'twi', 'TWI36G1262' => 'twi', 'TWI38G1287' => 'twi', 'TWI38G1633' => 'twi', 'TWI38G1982' => 'twi', 'TWI39G0116' => 'twi', 'TWI60G1011' => 'twi', 'TWI63G0171' => 'twi', 'TWI73G0839' => 'twi', 'TWI79G1511' => 'twi', 'unitig_0.g915' => 'ugi', 'unitig_0.g916' => 'ugi', 'unitig_21.g20219' => 'ugi', 'unitig_21.g20416' => 'ugi', 'unitig_578.g16132' => 'ugi', 'unitig_578.g16718' => 'ugi', 'unitig_62.g23481' => 'ugi', 'unitig_744.g24535' => 'ugi', 'unitig_749.g13525' => 'ugi', 'vmacro01248' => 'vma', 'vmacro02290' => 'vma', 'vmacro10946' => 'vma', 'vmacro11865' => 'vma', 'vmacro12493' => 'vma', 'vmacro17322' => 'vma', 'vmacro21599' => 'vma', 'vmacro23041' => 'vma', 'VMungo0251G0004' => 'vmu', 'VMungo0251G2639' => 'vmu', 'VMungo0251G2967' => 'vmu', 'VMungo0540G0864' => 'vmu', 'VMungo0540G1569' => 'vmu', 'VMungo0647G0317' => 'vmu', 'VMungo0720G1373' => 'vmu', 'VMungo0720G1508' => 'vmu', 'VMungo1080G0485' => 'vmu', 'VMungo1215G3177' => 'vmu', 'Zm00001eb112600' => 'zma', 'Zm00001eb120220' => 'zma', 'Zm00001eb153240' => 'zma', 'Zm00001eb168880' => 'zma', 'Zm00001eb213920' => 'zma', 'Zm00001eb228280' => 'zma', 'Zm00001eb254580' => 'zma', 'Zm00001eb272180' => 'zma', 'Zm00001eb293190' => 'zma', 'Zm00001eb322930' => 'zma', 'Zm00001eb353360' => 'zma', 'Zm00001eb353390' => 'zma', 'Zm00001eb353430' => 'zma', 'Zm00001eb353440' => 'zma', 'Zm00001eb353780' => 'zma' ) $gf_id = 'HOM05D000499' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000499' ) $data_identifier = 'HOM05D000499' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 29, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 12, 'amhyb' => (int) 8, 'aly' => (int) 12, 'aox' => (int) 9, 'arhy' => (int) 26, 'ath' => (int) 8, 'atr' => (int) 7, 'acertr' => (int) 10, 'cqu' => (int) 15, 'bca' => (int) 29, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 11, 'cansat' => (int) 8, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 9, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 8, 'cpa' => (int) 10, 'csa' => (int) 7, 'camsi' => (int) 20, 'dca' => (int) 8, 'din' => (int) 12, 'dzi' => (int) 14, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 6, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 38, 'gra' => (int) 16, 'vvi' => (int) 8, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 5, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 11, 'lja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 11, 'mpo' => (int) 3, 'mbi' => (int) 14, 'mdo' => (int) 14, 'mtr' => (int) 8, 'cme' => (int) 9, 'egut' => (int) 9, 'ama' => (int) 11, 'nta' => (int) 17, 'nnu' => (int) 11, 'oeu' => (int) 18, 'osa' => (int) 8, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 6, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 9, 'rsi' => (int) 9, 'sbr' => (int) 10, 'sbo' => (int) 8, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 10, 'sas' => (int) 10, 'shi' => (int) 6, 'smo' => (int) 7, 'sly' => (int) 14, 'spe' => (int) 10, 'spa' => (int) 8, 'tar' => (int) 19, 'tha' => (int) 10, 'tca' => (int) 8, 'esa' => (int) 8, 'tpr' => (int) 11, 'twi' => (int) 13, 'ugi' => (int) 9, 'vma' => (int) 8, 'vmu' => (int) 10, 'zma' => (int) 15 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb353780' $species_info = array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ) $local_species = 'bvu' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000499', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1066', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p29780' => 'bna', 'A02p33180' => 'bna', 'A03p16470' => 'bna', 'A03p66010' => 'bna', 'A04p25970' => 'bna', 'A06p01270' => 'bna', 'A06p46080' => 'bna', 'A07p11400' => 'bna', 'A08p01840' => 'bna', 'A08p08230' => 'bna', 'A08p25740' => 'bna', 'A09p32070' => 'bna', 'A09p37830' => 'bna', 'A09p42840' => 'bna', 'A09p42850' => 'bna', 'Aa31LG10G2060' => 'aar', 'Aa31LG2G7410' => 'aar', 'Aa31LG6G10200' => 'aar', 'Aa31LG6G16680' => 'aar', 'Aa31LG6G8470' => 'aar', 'Aa31LG9G12730' => 'aar', 'Aa31LG9G13680' => 'aar', 'Aa31LG9G14920' => 'aar', 'Aa31LG9G6650' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4977' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5467' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3254' => 'aag', 'Actinidia02578' => 'ach', 'Actinidia07693' => 'ach', 'Actinidia08413' => 'ach', 'Actinidia08414' => 'ach', 'Actinidia15289' => 'ach', 'Actinidia19871' => 'ach', 'Actinidia21475' => 'ach', 'Actinidia22576' => 'ach', 'Actinidia28327' => 'ach', 'Actinidia32491' => 'ach', 'Actinidia39463' => 'ach', 'Actinidia39571' => 'ach', 'Ah.01g013750' => 'amhyb', 'Ah.01g023210' => 'amhyb', 'Ah.04g164850' => 'amhyb', 'Ah.05g178060' => 'amhyb', 'Ah.07g204270' => 'amhyb', 'Ah.07g208480' => 'amhyb', 'Ah.09g237410' => 'amhyb', 'Ah.14g089460' => 'amhyb', 'AL1G41790' => 'aly', 'AL1G49050' => 'aly', 'AL1G53810' => 'aly', 'AL1G61400' => 'aly', 'AL4G18580' => 'aly', 'AL5G12510' => 'aly', 'AL5G12540' => 'aly', 'AL6G43230' => 'aly', 'AL7G10370' => 'aly', 'AL7G19250' => 'aly', 'AL8G12240' => 'aly', 'AL8G18540' => 'aly', 'Aqoxy1G02409' => 'aox', 'Aqoxy2G03993' => 'aox', 'Aqoxy3G03357' => 'aox', 'Aqoxy4G00785' => 'aox', 'Aqoxy5G02598' => 'aox', 'Aqoxy6G00132' => 'aox', 'Aqoxy7G01776' => 'aox', 'Aqoxy7G02316' => 'aox', 'Aqoxy7G03973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.12AFKW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B8730' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27IQR1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3F75VG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3RE0GA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41TCQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.527VTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FIR39' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5W8UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DA38EV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ63HS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H1I32C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HC27T5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4M8AP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7N3CZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9UVDZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LS1NQA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT1D4B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SKC4TM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCFV76' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF9Q1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQWD9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1ZM88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WE07RT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YCK7VH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJE6Q6' => 'arhy', 'AT1G28240' => 'ath', 'AT1G34550' => 'ath', 'AT1G53040' => 'ath', 'AT2G02910' => 'ath', 'AT4G09630' => 'ath', 'AT4G38500' => 'ath', 'AT5G42660' => 'ath', 'AT5G46220' => 'ath', 'ATR0152G026' => 'atr', 'ATR0564G343' => 'atr', 'ATR0706G151' => 'atr', 'ATR0733G207' => 'atr', 'ATR0751G234' => 'atr', 'ATR0807G048' => 'atr', 'ATR1091G084' => 'atr', 'Atru.chr10.1229' => 'acertr', 'Atru.chr10.1230' => 'acertr', 'Atru.chr10.1874' => 'acertr', 'Atru.chr11.1808' => 'acertr', 'Atru.chr13.1795' => 'acertr', 'Atru.chr13.570' => 'acertr', 'Atru.chr2.2608' => 'acertr', 'Atru.chr2.2609' => 'acertr', 'Atru.chr5.3428' => 'acertr', 'Atru.chr8.1171' => 'acertr', 'AUR62004651' => 'cqu', 'AUR62008675' => 'cqu', 'AUR62010014' => 'cqu', 'AUR62013004' => 'cqu', 'AUR62014825' => 'cqu', 'AUR62015015' => 'cqu', 'AUR62015151' => 'cqu', 'AUR62017020' => 'cqu', 'AUR62019422' => 'cqu', 'AUR62023570' => 'cqu', 'AUR62025571' => 'cqu', 'AUR62029098' => 'cqu', 'AUR62033863' => 'cqu', 'AUR62034296' => 'cqu', 'AUR62040075' => 'cqu', 'BcaB02g07334' => 'bca', 'BcaB02g10575' => 'bca', 'BcaB03g12119' => 'bca', 'BcaB03g12120' => 'bca', 'BcaB03g13945' => 'bca', 'BcaB04g17123' => 'bca', 'BcaB04g17867' => 'bca', 'BcaB04g19839' => 'bca', 'BcaB07g30317' => 'bca', 'BcaB07g32432' => 'bca', 'BcaB07g33362' => 'bca', 'BcaB08g36611' => 'bca', 'BcaC01g00028' => 'bca', 'BcaC01g01356' => 'bca', 'BcaC01g02034' => 'bca', 'BcaC01g06051' => 'bca', 'BcaC03g16839' => 'bca', 'BcaC03g17176' => 'bca', 'BcaC05g26829' => 'bca', 'BcaC06g31490' => 'bca', 'BcaC06g35344' => 'bca', 'BcaC06g36570' => 'bca', 'BcaC07g37537' => 'bca', 'BcaC08g43491' => 'bca', 'BcaC08g43773' => 'bca', 'BcaNung00234' => 'bca', 'BcaNung01982' => 'bca', 'BcaNung03707' => 'bca', 'BcaNung06454' => 'bca', 'BolC2t10762H' => 'bol', 'BolC2t11191H' => 'bol', 'BolC3t14322H' => 'bol', 'BolC3t19747H' => 'bol', 'BolC3t21425H' => 'bol', 'BolC4t27800H' => 'bol', 'BolC5t31423H' => 'bol', 'BolC6t35951H' => 'bol', 'BolC6t36282H' => 'bol', 'BolC7t40678H' => 'bol', 'BolC7t40679H' => 'bol', 'BolC7t42222H' => 'bol', 'BolC7t43492H' => 'bol', 'BolC7t46785H' => 'bol', 'BolC8t47853H' => 'bol', 'BolC9t56805H' => 'bol', 'BraA02t08000Z' => 'bra', 'BraA02t08341Z' => 'bra', 'BraA03t10936Z' => 'bra', 'BraA03t15657Z' => 'bra', 'BraA04t18100Z' => 'bra', 'BraA05t20523Z' => 'bra', 'BraA06t23353Z' => 'bra', 'BraA06t27473Z' => 'bra', 'BraA06t27769Z' => 'bra', 'BraA07t28928Z' => 'bra', 'BraA08t32236Z' => 'bra', 'BraA08t32841Z' => 'bra', 'BraA08t34524Z' => 'bra', 'BraA09t38742Z' => 'bra', 'BraA09t39295Z' => 'bra', 'C02p47180' => 'bna', 'C02p50990' => 'bna', 'C03p19360' => 'bna', 'C03p74950' => 'bna', 'C03p91000' => 'bna', 'C04p63260' => 'bna', 'C05p27050' => 'bna', 'C06p08750' => 'bna', 'C06p11490' => 'bna', 'C07p02820' => 'bna', 'C07p17180' => 'bna', 'C07p29440' => 'bna', 'C07p63730' => 'bna', 'C09p39260' => 'bna', 'CAN.G1164.34' => 'can', 'CAN.G1164.39' => 'can', 'CAN.G1530.3' => 'can', 'CAN.G162.61' => 'can', 'CAN.G176.6' => 'can', 'CAN.G289.49' => 'can', 'CAN.G370.21' => 'can', 'CAN.G370.22' => 'can', 'CAN.G371.117' => 'can', 'CAN.G58.37' => 'can', 'CAN.G588.98' => 'can', 'CANSAT21G2266' => 'cansat', 'CANSAT25G2799' => 'cansat', 'CANSAT35G0862' => 'cansat', 'CANSAT35G1704' => 'cansat', 'CANSAT35G1760' => 'cansat', 'CANSAT56G3971' => 'cansat', 'CANSAT56G4116' => 'cansat', 'CANSAT80G1259' => 'cansat', 'CARHR027730' => 'chi', 'CARHR033880' => 'chi', 'CARHR043270' => 'chi', 'CARHR145330' => 'chi', 'CARHR145340' => 'chi', 'CARHR175570' => 'chi', 'CARHR181570' => 'chi', 'CARHR258470' => 'chi', 'CARHR260490' => 'chi', 'CARHR294220' => 'chi', 'Carub.0001s2668' => 'cru', 'Carub.0001s3257' => 'cru', 'Carub.0001s4220' => 'cru', 'Carub.0005s0179' => 'cru', 'Carub.0006s2807' => 'cru', 'Carub.0007s0039' => 'cru', 'Carub.0008s0169' => 'cru', 'Carub.0008s0636' => 'cru', 'Ca_00338_v3' => 'car', 'Ca_00542_v3' => 'car', 'Ca_01844_v3' => 'car', 'Ca_10611_v3' => 'car', 'Ca_13326_v3' => 'car', 'Ca_17944_v3' => 'car', 'Ca_18546_v3' => 'car', 'Ca_24219_v3' => 'car', 'Ca_29972_v3' => 'car', 'CBR_g3681' => 'cbr', 'CBR_g40021' => 'cbr', 'Cc01_g08140' => 'ccan', 'Cc02_g13410' => 'ccan', 'Cc02_g37480' => 'ccan', 'Cc05_g12030' => 'ccan', 'Cc09_g03370' => 'ccan', 'Cc09_g10300' => 'ccan', 'Cc10_g03530' => 'ccan', 'Cc10_g11380' => 'ccan', 'CDE01G0176' => 'cde', 'CDE02G0675' => 'cde', 'CDE02G0942' => 'cde', 'CDE02G1153' => 'cde', 'CDE02G4177' => 'cde', 'CDE04G2117' => 'cde', 'CDE04G2736' => 'cde', 'CDE08G1161' => 'cde', 'CDE09G1238' => 'cde', 'Cfa000467' => 'cfa', 'Cfa000947' => 'cfa', 'Cfa004969' => 'cfa', 'Cfa005284' => 'cfa', 'Cfa008993' => 'cfa', 'Cfa018187' => 'cfa', 'Cfa018454' => 'cfa', 'Cfa020585' => 'cfa', 'Ciclev10000424m.g' => 'ccl', 'Ciclev10003605m.g' => 'ccl', 'Ciclev10007828m.g' => 'ccl', 'Ciclev10014620m.g' => 'ccl', 'Ciclev10015169m.g' => 'ccl', 'Ciclev10018291m.g' => 'ccl', 'Ciclev10028256m.g' => 'ccl', 'Ciclev10033822m.g' => 'ccl', 'CiPaw.05G060300' => 'cil', 'CiPaw.05G085000' => 'cil', 'CiPaw.06G083700' => 'cil', 'CiPaw.06G120300' => 'cil', 'CiPaw.09G060500' => 'cil', 'CiPaw.09G123800' => 'cil', 'CiPaw.11G169700' => 'cil', 'CiPaw.12G118300' => 'cil', 'CiPaw.15G071000' => 'cil', 'CiPaw.15G081900' => 'cil', 'ClCG01G024610' => 'cla', 'ClCG03G006070' => 'cla', 'ClCG05G019250' => 'cla', 'ClCG09G009500' => 'cla', 'ClCG11G008200' => 'cla', 'ClCG11G018080' => 'cla', 'COL.COLO4_17373' => 'col', 'COL.COLO4_22994' => 'col', 'COL.COLO4_26389' => 'col', 'COL.COLO4_27170' => 'col', 'COL.COLO4_31074' => 'col', 'COL.COLO4_31465' => 'col', 'COL.COLO4_36438' => 'col', 'COL.COLO4_36439' => 'col', 'Cpa.g.c38781' => 'cpa', 'Cpa.g.sc128.12' => 'cpa', 'Cpa.g.sc166.7' => 'cpa', 'Cpa.g.sc166.8' => 'cpa', 'Cpa.g.sc20.111' => 'cpa', 'Cpa.g.sc27.31' => 'cpa', 'Cpa.g.sc64.36' => 'cpa', 'Cpa.g.sc64.37' => 'cpa', 'Cpa.g.sc66.49' => 'cpa', 'Cpa.g.sc80.64' => 'cpa', 'CsaV3_1G012320' => 'csa', 'CsaV3_2G008480' => 'csa', 'CsaV3_2G033450' => 'csa', 'CsaV3_3G044830' => 'csa', 'CsaV3_4G033710' => 'csa', 'CsaV3_6G051730' => 'csa', 'CsaV3_7G025350' => 'csa', 'CSS0001067' => 'camsi', 'CSS0005996' => 'camsi', 'CSS0006590' => 'camsi', 'CSS0009673' => 'camsi', 'CSS0010201' => 'camsi', 'CSS0010549' => 'camsi', 'CSS0011364' => 'camsi', 'CSS0014473' => 'camsi', 'CSS0014961' => 'camsi', 'CSS0020191' => 'camsi', 'CSS0021165' => 'camsi', 'CSS0022306' => 'camsi', 'CSS0030591' => 'camsi', 'CSS0030696' => 'camsi', 'CSS0032653' => 'camsi', 'CSS0037487' => 'camsi', 'CSS0041102' => 'camsi', 'CSS0041261' => 'camsi', 'CSS0046246' => 'camsi', 'CSS0049256' => 'camsi', 'DCAR_004075' => 'dca', 'DCAR_011538' => 'dca', 'DCAR_019553' => 'dca', 'DCAR_020952' => 'dca', 'DCAR_021739' => 'dca', 'DCAR_027407' => 'dca', 'DCAR_027913' => 'dca', 'DCAR_028066' => 'dca', 'Dinv05899' => 'din', 'Dinv07563' => 'din', 'Dinv08010' => 'din', 'Dinv14125' => 'din', 'Dinv20172' => 'din', 'Dinv30743' => 'din', 'Dinv31229' => 'din', 'Dinv34162' => 'din', 'Dinv36028' => 'din', 'Dinv39368' => 'din', 'Dinv40565' => 'din', 'Dinv41706' => 'din', 'Duzib052G0089' => 'dzi', 'Duzib116G0641' => 'dzi', 'Duzib132G0069' => 'dzi', 'Duzib132G1219' => 'dzi', 'Duzib147G0278' => 'dzi', 'Duzib160G0480' => 'dzi', 'Duzib170G0661' => 'dzi', 'Duzib177G0591' => 'dzi', 'Duzib187G1353' => 'dzi', 'Duzib192G0858' => 'dzi', 'Duzib192G0883' => 'dzi', 'Duzib213G0506' => 'dzi', 'Duzib235G0289' => 'dzi', 'Duzib251G0422' => 'dzi', 'ECA232G3898' => 'eca', 'ECA233G5950' => 'eca', 'ECA234G1699' => 'eca', 'ECA234G2421' => 'eca', 'ECA236G0426' => 'eca', 'ECA236G4331' => 'eca', 'ECA248G2573' => 'eca', 'EL10Ac1g00077' => 'bvu', 'EL10Ac1g01746' => 'bvu', 'EL10Ac2g03464' => 'bvu', 'EL10Ac4g08176' => 'bvu', 'EL10Ac7g17521' => 'bvu', 'EL10Ac8g20386' => 'bvu', 'EL10Ac9g21343' => 'bvu', 'EL10Ac9g22688' => 'bvu', 'Eucgr.B03434' => 'egr', 'Eucgr.D00618' => 'egr', 'Eucgr.E02395' => 'egr', 'Eucgr.F01129' => 'egr', 'Eucgr.F02622' => 'egr', 'Eucgr.F04207' => 'egr', 'FAN01G0570' => 'fan', 'FAN03G3351' => 'fan', 'FAN06G3702' => 'fan', 'FAN07G2149' => 'fan', 'FAN10G3758' => 'fan', 'FAN11G1170' => 'fan', 'FAN11G2050' => 'fan', 'FAN11G2724' => 'fan', 'FAN12G1700' => 'fan', 'FAN12G2028' => 'fan', 'FAN15G1160' => 'fan', 'FAN15G3063' => 'fan', 'FAN16G2540' => 'fan', 'FAN16G3077' => 'fan', 'FAN16G3624' => 'fan', 'FAN17G0221' => 'fan', 'FAN20G2492' => 'fan', 'FAN20G2905' => 'fan', 'FAN21G0548' => 'fan', 'FAN21G1300' => 'fan', 'FAN22G0077' => 'fan', 'FAN22G1315' => 'fan', 'FAN24G1280' => 'fan', 'FAN24G1445' => 'fan', 'FAN24G3527' => 'fan', 'FAN25G0464' => 'fan', 'FAN25G2885' => 'fan', 'FAN25G3270' => 'fan', 'FAN27G1101' => 'fan', 'FAN27G2846' => 'fan', 'FAN27G3524' => 'fan', 'FvH4_2g11770' => 'fve', 'FvH4_2g15630' => 'fve', 'FvH4_3g05570' => 'fve', 'FvH4_3g09110' => 'fve', 'FvH4_3g19940' => 'fve', 'FvH4_4g04821' => 'fve', 'FvH4_4g31480' => 'fve', 'FvH4_7g01740' => 'fve', 'Glyma.05G130400' => 'gma', 'Glyma.05G156400' => 'gma', 'Glyma.07G197000' => 'gma', 'Glyma.08G085151' => 'gma', 'Glyma.08G114500' => 'gma', 'Glyma.08G300400' => 'gma', 'Glyma.10G215800' => 'gma', 'Glyma.12G224400' => 'gma', 'Glyma.13G179300' => 'gma', 'Glyma.13G218151' => 'gma', 'Glyma.13G238800' => 'gma', 'Glyma.13G276900' => 'gma', 'Glyma.14G078200' => 'gma', 'Glyma.15G074500' => 'gma', 'Glyma.15G094100' => 'gma', 'Glyma.17G247200' => 'gma', 'Glyma.18G120100' => 'gma', 'Glyma.20G176000' => 'gma', 'Gohir.A01G063600' => 'ghi', 'Gohir.A01G170301' => 'ghi', 'Gohir.A02G060500' => 'ghi', 'Gohir.A05G133850' => 'ghi', 'Gohir.A05G161400' => 'ghi', 'Gohir.A06G012900' => 'ghi', 'Gohir.A06G035901' => 'ghi', 'Gohir.A06G127100' => 'ghi', 'Gohir.A06G210500' => 'ghi', 'Gohir.A08G008650' => 'ghi', 'Gohir.A09G072700' => 'ghi', 'Gohir.A09G088301' => 'ghi', 'Gohir.A10G040600' => 'ghi', 'Gohir.A12G036300' => 'ghi', 'Gohir.A12G143350' => 'ghi', 'Gohir.A12G165500' => 'ghi', 'Gohir.A13G145700' => 'ghi', 'Gohir.D01G050000' => 'ghi', 'Gohir.D01G051366' => 'ghi', 'Gohir.D01G161350' => 'ghi', 'Gohir.D02G065900' => 'ghi', 'Gohir.D05G164200' => 'ghi', 'Gohir.D05G355500' => 'ghi', 'Gohir.D06G010400' => 'ghi', 'Gohir.D06G111250' => 'ghi', 'Gohir.D06G132000' => 'ghi', 'Gohir.D06G210500' => 'ghi', 'Gohir.D07G165675' => 'ghi', 'Gohir.D08G062240' => 'ghi', 'Gohir.D08G086101' => 'ghi', 'Gohir.D08G138060' => 'ghi', 'Gohir.D09G072300' => 'ghi', 'Gohir.D10G041400' => 'ghi', 'Gohir.D11G191020' => 'ghi', 'Gohir.D11G212066' => 'ghi', 'Gohir.D12G036300' => 'ghi', 'Gohir.D12G168600' => 'ghi', 'Gohir.D13G150600' => 'ghi', 'Gorai.001G057300' => 'gra', 'Gorai.002G069900' => 'gra', 'Gorai.002G200000' => 'gra', 'Gorai.003G067600' => 'gra', 'Gorai.005G074800' => 'gra', 'Gorai.006G087300' => 'gra', 'Gorai.008G037500' => 'gra', 'Gorai.008G181400' => 'gra', 'Gorai.009G169400' => 'gra', 'Gorai.009G387900' => 'gra', 'Gorai.010G013300' => 'gra', 'Gorai.010G153800' => 'gra', 'Gorai.010G255800' => 'gra', 'Gorai.011G043700' => 'gra', 'Gorai.011G198900' => 'gra', 'Gorai.013G168400' => 'gra', 'GSVIVG01005212001' => 'vvi', 'GSVIVG01006163001' => 'vvi', 'GSVIVG01009625001' => 'vvi', 'GSVIVG01014338001' => 'vvi', 'GSVIVG01020005001' => 'vvi', 'GSVIVG01021450001' => 'vvi', 'GSVIVG01023975001' => 'vvi', 'GSVIVG01034490001' => 'vvi', 'HanXRQChr04g0112071' => 'han', 'HanXRQChr05g0131151' => 'han', 'HanXRQChr09g0262371' => 'han', 'HanXRQChr09g0268401' => 'han', 'HanXRQChr10g0279241' => 'han', 'HanXRQChr10g0297961' => 'han', 'HanXRQChr11g0326231' => 'han', 'HanXRQChr11g0328471' => 'han', 'HanXRQChr16g0507941' => 'han', 'HanXRQChr17g0560211' => 'han', 'Haze_02108' => 'cav', 'Haze_02428' => 'cav', 'Haze_05593' => 'cav', 'Haze_06448' => 'cav', 'Haze_09427' => 'cav', 'Haze_12022' => 'cav', 'Haze_17612' => 'cav', 'Haze_17928' => 'cav', 'Hma1.2p1_0032F.1_g019250' => 'hma', 'Hma1.2p1_0163F.1_g072690' => 'hma', 'Hma1.2p1_0265F.1_g106710' => 'hma', 'Hma1.2p1_0286F.1_g113970' => 'hma', 'Hma1.2p1_0363F.1_g136640' => 'hma', 'Hma1.2p1_0584F.1_g183470' => 'hma', 'Hma1.2p1_0885F.1_g232570' => 'hma', 'HPP92_006022' => 'vpl', 'HPP92_007320' => 'vpl', 'HPP92_011521' => 'vpl', 'HPP92_019387' => 'vpl', 'HPP92_024038' => 'vpl', 'Hund05891' => 'sun', 'Hund06450' => 'sun', 'Hund12053' => 'sun', 'Hund16800' => 'sun', 'Hund21222' => 'sun', 'Hund22896' => 'sun', 'Hund23746' => 'sun', 'Hund27083' => 'sun', 'Lalb_Chr02g0141831' => 'lal', 'Lalb_Chr02g0141841' => 'lal', 'Lalb_Chr05g0220411' => 'lal', 'Lalb_Chr06g0162081' => 'lal', 'Lalb_Chr09g0327651' => 'lal', 'Lalb_Chr13g0295051' => 'lal', 'Lalb_Chr15g0086801' => 'lal', 'Lalb_Chr16g0383781' => 'lal', 'Lalb_Chr16g0383791' => 'lal', 'Lalb_Chr18g0055441' => 'lal', 'Lalb_Chr18g0059611' => 'lal', 'Lalb_Chr20g0109661' => 'lal', 'Lalb_Chr20g0109831' => 'lal', 'Lalb_Chr20g0121871' => 'lal', 'Lalb_Chr22g0355361' => 'lal', 'Lalb_Chr25g0286371' => 'lal', 'Lj1A1187G43' => 'lonja', 'Lj1A1205T50' => 'lonja', 'Lj1A800G33' => 'lonja', 'Lj1C1187T7' => 'lonja', 'Lj1C843T11' => 'lonja', 'Lj1g0010940' => 'lja', 'Lj2A288T69' => 'lonja', 'Lj3g0024276' => 'lja', 'Lj4A47T76' => 'lonja', 'Lj4g0005805' => 'lja', 'Lj4g0006097' => 'lja', 'Lj4g0008528' => 'lja', 'Lj4g0024907' => 'lja', 'Lj5g0012472' => 'lja', 'Lj5g0018648' => 'lja', 'Lj6C789G1' => 'lonja', 'Lj6g0004000' => 'lja', 'Lj7A292G67' => 'lonja', 'Lj7A292T64' => 'lonja', 'Lj9A400T58' => 'lonja', 'Lsat_1_v5_gn_1_126181' => 'lsa', 'Lsat_1_v5_gn_4_123041' => 'lsa', 'Lsat_1_v5_gn_4_133620' => 'lsa', 'Lsat_1_v5_gn_4_53221' => 'lsa', 'Lsat_1_v5_gn_4_71961' => 'lsa', 'Lsat_1_v5_gn_7_105241' => 'lsa', 'Lsat_1_v5_gn_7_21361' => 'lsa', 'Lsat_1_v5_gn_7_28860' => 'lsa', 'Lsat_1_v5_gn_7_31260' => 'lsa', 'Lsat_1_v5_gn_8_52801' => 'lsa', 'Manes.02G191400' => 'mes', 'Manes.03G110100' => 'mes', 'Manes.04G071100' => 'mes', 'Manes.05G100500' => 'mes', 'Manes.05G164700' => 'mes', 'Manes.15G087000' => 'mes', 'Manes.15G121500' => 'mes', 'Manes.16G028300' => 'mes', 'Manes.17G046100' => 'mes', 'Manes.17G069800' => 'mes', 'Manes.18G100500' => 'mes', 'Mapoly0002s0109' => 'mpo', 'Mapoly0024s0007' => 'mpo', 'Mapoly0089s0032' => 'mpo', 'MBI04_g42241_MAGBIO' => 'mbi', 'MBI05_g11988_MAGBIO' => 'mbi', 'MBI05_g35452_MAGBIO' => 'mbi', 'MBI07_g30179_MAGBIO' => 'mbi', 'MBI07_g35859_MAGBIO' => 'mbi', 'MBI07_g35860_MAGBIO' => 'mbi', 'MBI07_g37166_MAGBIO' => 'mbi', 'MBI08_g18172_MAGBIO' => 'mbi', 'MBI09_g08441_MAGBIO' => 'mbi', 'MBI13_g01676_MAGBIO' => 'mbi', 'MBI14_g42955_MAGBIO' => 'mbi', 'MBI16_g13161_MAGBIO' => 'mbi', 'MBI17_g27204_MAGBIO' => 'mbi', 'MBI19_g21595_MAGBIO' => 'mbi', 'MD00G1148400' => 'mdo', 'MD02G1301200' => 'mdo', 'MD03G1227800' => 'mdo', 'MD05G1041100' => 'mdo', 'MD05G1124800' => 'mdo', 'MD05G1284000' => 'mdo', 'MD05G1338800' => 'mdo', 'MD05G1338900' => 'mdo', 'MD07G1022800' => 'mdo', 'MD10G1047500' => 'mdo', 'MD10G1127500' => 'mdo', 'MD10G1262300' => 'mdo', 'MD10G1293800' => 'mdo', 'MD16G1074300' => 'mdo', 'Medtr1g021670' => 'mtr', 'Medtr1g096320' => 'mtr', 'Medtr2g013690' => 'mtr', 'Medtr2g019450' => 'mtr', 'Medtr2g085170' => 'mtr', 'Medtr4g088785' => 'mtr', 'Medtr8g055930' => 'mtr', 'Medtr8g085850' => 'mtr', 'MELO3C002605.2' => 'cme', 'MELO3C003891.2' => 'cme', 'MELO3C004012.2' => 'cme', 'MELO3C007134.2' => 'cme', 'MELO3C008118.2' => 'cme', 'MELO3C016700.2' => 'cme', 'MELO3C024127.2' => 'cme', 'MELO3C033361.2' => 'cme', 'MELO3C033362.2' => 'cme', 'Migut.C00430' => 'egut', 'Migut.C01246' => 'egut', 'Migut.E00101' => 'egut', 'Migut.H01486' => 'egut', 'Migut.H01939' => 'egut', 'Migut.K00360' => 'egut', 'Migut.M00910' => 'egut', 'Migut.M01139' => 'egut', 'Migut.N02677' => 'egut', 'MSTRG.13252' => 'ama', 'MSTRG.14701' => 'ama', 'MSTRG.1521' => 'ama', 'MSTRG.15884' => 'ama', 'MSTRG.16242' => 'ama', 'MSTRG.22285' => 'ama', 'MSTRG.22444' => 'ama', 'MSTRG.2349' => 'ama', 'MSTRG.26308' => 'ama', 'MSTRG.28296' => 'ama', 'MSTRG.9895' => 'ama', 'Nitab4.5_0000110g0060' => 'nta', 'Nitab4.5_0000420g0130' => 'nta', 'Nitab4.5_0000422g0030' => 'nta', 'Nitab4.5_0000560g0180' => 'nta', 'Nitab4.5_0000703g0100' => 'nta', 'Nitab4.5_0000786g0200' => 'nta', 'Nitab4.5_0001336g0020' => 'nta', 'Nitab4.5_0001796g0030' => 'nta', 'Nitab4.5_0003348g0060' => 'nta', 'Nitab4.5_0003698g0040' => 'nta', 'Nitab4.5_0003942g0090' => 'nta', 'Nitab4.5_0004775g0070' => 'nta', 'Nitab4.5_0004864g0030' => 'nta', 'Nitab4.5_0005615g0020' => 'nta', 'Nitab4.5_0009288g0030' => 'nta', 'Nitab4.5_0009341g0010' => 'nta', 'Nitab4.5_0009535g0010' => 'nta', 'Nn1g03995' => 'nnu', 'Nn1g04100' => 'nnu', 'Nn1g06530' => 'nnu', 'Nn3g16404' => 'nnu', 'Nn3g17212' => 'nnu', 'Nn3g20776' => 'nnu', 'Nn3g21923' => 'nnu', 'Nn5g27737' => 'nnu', 'Nn5g29461' => 'nnu', 'Nn7g38355' => 'nnu', 'Nn8g39873' => 'nnu', 'Oeu000548.2' => 'oeu', 'Oeu004672.1' => 'oeu', 'Oeu015605.2' => 'oeu', 'Oeu016092.1' => 'oeu', 'Oeu017879.3' => 'oeu', 'Oeu024910.1' => 'oeu', 'Oeu028965.1' => 'oeu', 'Oeu031269.1' => 'oeu', 'Oeu031270.1' => 'oeu', 'Oeu032535.1' => 'oeu', 'Oeu034151.1' => 'oeu', 'Oeu034152.1' => 'oeu', 'Oeu034588.2' => 'oeu', 'Oeu050846.1' => 'oeu', 'Oeu050849.2' => 'oeu', 'Oeu051063.2' => 'oeu', 'Oeu052368.1' => 'oeu', 'Oeu052370.1' => 'oeu', 'Os01g0210400' => 'osa', 'Os01g0304300' => 'osa', 'Os01g0749100' => 'osa', 'Os02g0745800' => 'osa', 'Os03g0769050' => 'osa', 'Os05g0531500' => 'osa', 'Os06g0724300' => 'osa', 'Os11g0198100' => 'osa', 'Peaxi162Scf00069g01425' => 'pax', 'Peaxi162Scf00280g00811' => 'pax', 'Peaxi162Scf00310g00615' => 'pax', 'Peaxi162Scf00362g00542' => 'pax', 'Peaxi162Scf00461g00310' => 'pax', 'Peaxi162Scf00530g00118' => 'pax', 'Peaxi162Scf00541g00057' => 'pax', 'Peaxi162Scf00661g00017' => 'pax', 'Peaxi162Scf00926g00027' => 'pax', 'Peaxi162Scf01064g00263' => 'pax', 'Peaxi162Scf01211g00135' => 'pax', 'PGR004G2336' => 'pgr', 'PGR042G0327' => 'pgr', 'PGR042G1957' => 'pgr', 'PGR042G2003' => 'pgr', 'PGR042G3929' => 'pgr', 'PGR083G1137' => 'pgr', 'PGR083G1364' => 'pgr', 'PGSC0003DMG400003381' => 'stu', 'PGSC0003DMG400003417' => 'stu', 'PGSC0003DMG400008981' => 'stu', 'PGSC0003DMG400012417' => 'stu', 'PGSC0003DMG400012823' => 'stu', 'PGSC0003DMG400016885' => 'stu', 'PGSC0003DMG400022812' => 'stu', 'PGSC0003DMG400029726' => 'stu', 'PGSC0003DMG401009243' => 'stu', 'PGSC0003DMG401031505' => 'stu', 'PGSC0003DMG402031505' => 'stu', 'Phvul.001G017600' => 'pvu', 'Phvul.002G193500' => 'pvu', 'Phvul.002G228900' => 'pvu', 'Phvul.002G236800' => 'pvu', 'Phvul.003G049500' => 'pvu', 'Phvul.005G072000' => 'pvu', 'Phvul.006G164800' => 'pvu', 'Phvul.006G185100' => 'pvu', 'Phvul.007G090000' => 'pvu', 'Potri.001G399800' => 'ptr', 'Potri.002G149900' => 'ptr', 'Potri.004G044100' => 'ptr', 'Potri.004G177600' => 'ptr', 'Potri.009G138000' => 'ptr', 'Potri.010G094000' => 'ptr', 'Potri.011G053000' => 'ptr', 'Potri.011G119300' => 'ptr', 'Potri.013G113700' => 'ptr', 'Potri.018G107800' => 'ptr', 'Potri.019G084100' => 'ptr', 'Pp3c14_23720' => 'ppa', 'Pp3c16_6340' => 'ppa', 'Pp3c23_13420' => 'ppa', 'Pp3c24_2740' => 'ppa', 'Pp3c25_860' => 'ppa', 'Pp3c8_21750' => 'ppa', 'Prupe.1G273000' => 'ppe', 'Prupe.1G273700' => 'ppe', 'Prupe.1G274100' => 'ppe', 'Prupe.2G023300' => 'ppe', 'Prupe.4G048000' => 'ppe', 'Prupe.4G080400' => 'ppe', 'Prupe.4G181200' => 'ppe', 'Prupe.8G056900' => 'ppe', 'Prupe.8G168700' => 'ppe', 'Psat1g189080' => 'psa', 'Psat1g204760' => 'psa', 'Psat4g175560' => 'psa', 'Psat4g177720' => 'psa', 'Psat5g244240' => 'psa', 'Psat6g010720' => 'psa', 'Psat6g187200' => 'psa', 'Psat7g072040' => 'psa', 'PSO017G3501' => 'pso', 'PSO063G2148' => 'pso', 'PSO063G5608' => 'pso', 'PSO210G6392' => 'pso', 'PSO541G2319' => 'pso', 'PSO541G2836' => 'pso', 'PSO541G4012' => 'pso', 'PSO541G6253' => 'pso', 'PSO675G0580' => 'pso', 'PSO675G0856' => 'pso', 'PSO675G5635' => 'pso', 'PSO675G9157' => 'pso', 'PSO832G1660' => 'pso', 'PSO832G1969' => 'pso', 'QL02p007186' => 'qlo', 'QL02p033904' => 'qlo', 'QL03p064391' => 'qlo', 'QL05p040593' => 'qlo', 'QL05p058242' => 'qlo', 'QL08p021825' => 'qlo', 'QL11p004981' => 'qlo', 'RcHm_v2.0_Chr1g0318301' => 'rch', 'RcHm_v2.0_Chr4g0418501' => 'rch', 'RcHm_v2.0_Chr4g0439971' => 'rch', 'RcHm_v2.0_Chr5g0008541' => 'rch', 'RcHm_v2.0_Chr5g0014101' => 'rch', 'RcHm_v2.0_Chr5g0014131' => 'rch', 'RcHm_v2.0_Chr5g0033621' => 'rch', 'RcHm_v2.0_Chr6g0272041' => 'rch', 'RcHm_v2.0_Chr6g0278831' => 'rch', 'Rhsim02G0130400' => 'rsi', 'Rhsim02G0171100' => 'rsi', 'Rhsim05G0053000' => 'rsi', 'Rhsim05G0053100' => 'rsi', 'Rhsim06G0096500' => 'rsi', 'Rhsim06G0096600' => 'rsi', 'Rhsim06G0199100' => 'rsi', 'Rhsim12G0062300' => 'rsi', 'Rhsim12G0062800' => 'rsi', 'Sabra02G0118600' => 'sbr', 'Sabra04G0027300' => 'sbr', 'Sabra04G0119500' => 'sbr', 'Sabra08G0112500' => 'sbr', 'Sabra11G0036800' => 'sbr', 'Sabra11G0103800' => 'sbr', 'Sabra13G0096300' => 'sbr', 'Sabra16G0262300' => 'sbr', 'Sabra18G0091700' => 'sbr', 'Sabra19G0095400' => 'sbr', 'SalBow6G3080' => 'sbo', 'SalBow7G1157' => 'sbo', 'SalBow7G2123' => 'sbo', 'SalBow7G2285' => 'sbo', 'SalBow7G3537' => 'sbo', 'SalBow8G2947' => 'sbo', 'SalBow8G4463' => 'sbo', 'SalBow8G5466' => 'sbo', 'Sc01g0001750' => 'sci', 'Sc02g0006640' => 'sci', 'Sc02g0006670' => 'sci', 'Sc04g0008220' => 'sci', 'Sc05g0006190' => 'sci', 'Sc08g0002760' => 'sci', 'Sc17g0006170' => 'sci', 'Sc22g0002050' => 'sci', 'Sc23g0001190' => 'sci', 'Sc24g0000980' => 'sci', 'Sed0006245' => 'sed', 'Sed0007543' => 'sed', 'Sed0009411' => 'sed', 'Sed0010765' => 'sed', 'Sed0012944' => 'sed', 'Sed0014682' => 'sed', 'Sed0016174' => 'sed', 'Sed0016796' => 'sed', 'Sed0020317' => 'sed', 'Sed0021467' => 'sed', 'SEGI_01316' => 'sgi', 'SEGI_03374' => 'sgi', 'SEGI_16265' => 'sgi', 'SEGI_18569' => 'sgi', 'SEGI_20351' => 'sgi', 'SEGI_26395' => 'sgi', 'SEGI_29469' => 'sgi', 'SEGI_34771' => 'sgi', 'SEGI_36769' => 'sgi', 'SEGI_37139' => 'sgi', 'SGA_v2.0_scaffold100G29687' => 'sas', 'SGA_v2.0_scaffold118G32472' => 'sas', 'SGA_v2.0_scaffold14G07051' => 'sas', 'SGA_v2.0_scaffold183G39845' => 'sas', 'SGA_v2.0_scaffold1G00174' => 'sas', 'SGA_v2.0_scaffold22G09714' => 'sas', 'SGA_v2.0_scaffold333G48992' => 'sas', 'SGA_v2.0_scaffold46G17491' => 'sas', 'SGA_v2.0_scaffold49G18294' => 'sas', 'SGA_v2.0_scaffold63G21658' => 'sas', 'SHI01741' => 'shi', 'SHI05771' => 'shi', 'SHI18077' => 'shi', 'SHI20525' => 'shi', 'SHI20527' => 'shi', 'SHI20528' => 'shi', 'SMO172G0185' => 'smo', 'SMO198G0020' => 'smo', 'SMO351G0006' => 'smo', 'SMO356G0118' => 'smo', 'SMO358G0296' => 'smo', 'SMO367G0079' => 'smo', 'SMO367G1277' => 'smo', 'Solyc01g014220.3' => 'sly', 'Solyc01g111770.2' => 'sly', 'Solyc02g078180.3' => 'sly', 'Solyc03g006430.3' => 'sly', 'Solyc03g006456.1' => 'sly', 'Solyc03g079860.2' => 'sly', 'Solyc04g079770.3' => 'sly', 'Solyc05g007430.4' => 'sly', 'Solyc07g063150.3' => 'sly', 'Solyc08g016620.3' => 'sly', 'Solyc09g057590.3' => 'sly', 'Solyc09g057600.1' => 'sly', 'Solyc10g009050.3' => 'sly', 'Solyc11g017420.2' => 'sly', 'Sopen01g053810' => 'spe', 'Sopen02g023040' => 'spe', 'Sopen03g002440' => 'spe', 'Sopen04g033350' => 'spe', 'Sopen05g003310' => 'spe', 'Sopen07g004050' => 'spe', 'Sopen07g031340' => 'spe', 'Sopen08g006990' => 'spe', 'Sopen10g004830' => 'spe', 'Sopen11g009370' => 'spe', 'Sp1g24450' => 'spa', 'Sp1g29670' => 'spa', 'Sp1g39600' => 'spa', 'Sp2g11080' => 'spa', 'Sp2g13970' => 'spa', 'Sp4g16130' => 'spa', 'Sp6g13080' => 'spa', 'Sp7g37270' => 'spa', 'TAR371G0065' => 'tar', 'TAR376G0340' => 'tar', 'TAR376G0435' => 'tar', 'TAR381G0002' => 'tar', 'TAR381G1236' => 'tar', 'TAR624G0055' => 'tar', 'TAR624G0324' => 'tar', 'TAR624G0696' => 'tar', 'TAR624G0906' => 'tar', 'TAR625G0107' => 'tar', 'TAR626G0015' => 'tar', 'TAR626G1356' => 'tar', 'TAR627G0888' => 'tar', 'TAR628G0399' => 'tar', 'TAR628G1327' => 'tar', 'TAR629G2831' => 'tar', 'TAR629G2874' => 'tar', 'TAR633G1432' => 'tar', 'TAR633G2771' => 'tar', 'THA.LOC104803394' => 'tha', 'THA.LOC104805153' => 'tha', 'THA.LOC104806784' => 'tha', 'THA.LOC104810473' => 'tha', 'THA.LOC104813100' => 'tha', 'THA.LOC104814215' => 'tha', 'THA.LOC104815554' => 'tha', 'THA.LOC104820544' => 'tha', 'THA.LOC104824754' => 'tha', 'THA.LOC104827717' => 'tha', 'Thecc.02G031400' => 'tca', 'Thecc.02G055900' => 'tca', 'Thecc.02G350800' => 'tca', 'Thecc.06G150900' => 'tca', 'Thecc.06G186600' => 'tca', 'Thecc.07G089600' => 'tca', 'Thecc.08G020400' => 'tca', 'Thecc.08G182100' => 'tca', 'Thhalv10000873m.g' => 'esa', 'Thhalv10004185m.g' => 'esa', 'Thhalv10006981m.g' => 'esa', 'Thhalv10007204m.g' => 'esa', 'Thhalv10011374m.g' => 'esa', 'Thhalv10013482m.g' => 'esa', 'Thhalv10017801m.g' => 'esa', 'Thhalv10024983m.g' => 'esa', 'TPR.G12072' => 'tpr', 'TPR.G15769' => 'tpr', 'TPR.G16504' => 'tpr', 'TPR.G16506' => 'tpr', 'TPR.G24345' => 'tpr', 'TPR.G26666' => 'tpr', 'TPR.G27320' => 'tpr', 'TPR.G31819' => 'tpr', 'TPR.G38879' => 'tpr', 'TPR.G39015' => 'tpr', 'TPR.G8819' => 'tpr', 'TWI09G0924' => 'twi', 'TWI12G0811' => 'twi', 'TWI12G1294' => 'twi', 'TWI31G0150' => 'twi', 'TWI36G1262' => 'twi', 'TWI38G1287' => 'twi', 'TWI38G1633' => 'twi', 'TWI38G1982' => 'twi', 'TWI39G0116' => 'twi', 'TWI60G1011' => 'twi', 'TWI63G0171' => 'twi', 'TWI73G0839' => 'twi', 'TWI79G1511' => 'twi', 'unitig_0.g915' => 'ugi', 'unitig_0.g916' => 'ugi', 'unitig_21.g20219' => 'ugi', 'unitig_21.g20416' => 'ugi', 'unitig_578.g16132' => 'ugi', 'unitig_578.g16718' => 'ugi', 'unitig_62.g23481' => 'ugi', 'unitig_744.g24535' => 'ugi', 'unitig_749.g13525' => 'ugi', 'vmacro01248' => 'vma', 'vmacro02290' => 'vma', 'vmacro10946' => 'vma', 'vmacro11865' => 'vma', 'vmacro12493' => 'vma', 'vmacro17322' => 'vma', 'vmacro21599' => 'vma', 'vmacro23041' => 'vma', 'VMungo0251G0004' => 'vmu', 'VMungo0251G2639' => 'vmu', 'VMungo0251G2967' => 'vmu', 'VMungo0540G0864' => 'vmu', 'VMungo0540G1569' => 'vmu', 'VMungo0647G0317' => 'vmu', 'VMungo0720G1373' => 'vmu', 'VMungo0720G1508' => 'vmu', 'VMungo1080G0485' => 'vmu', 'VMungo1215G3177' => 'vmu', 'Zm00001eb112600' => 'zma', 'Zm00001eb120220' => 'zma', 'Zm00001eb153240' => 'zma', 'Zm00001eb168880' => 'zma', 'Zm00001eb213920' => 'zma', 'Zm00001eb228280' => 'zma', 'Zm00001eb254580' => 'zma', 'Zm00001eb272180' => 'zma', 'Zm00001eb293190' => 'zma', 'Zm00001eb322930' => 'zma', 'Zm00001eb353360' => 'zma', 'Zm00001eb353390' => 'zma', 'Zm00001eb353430' => 'zma', 'Zm00001eb353440' => 'zma', 'Zm00001eb353780' => 'zma' ), 'gf_id' => 'HOM05D000499', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000499' ), 'data_identifier' => 'HOM05D000499', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000499', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1066', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p29780' => 'bna', 'A02p33180' => 'bna', 'A03p16470' => 'bna', 'A03p66010' => 'bna', 'A04p25970' => 'bna', 'A06p01270' => 'bna', 'A06p46080' => 'bna', 'A07p11400' => 'bna', 'A08p01840' => 'bna', 'A08p08230' => 'bna', 'A08p25740' => 'bna', 'A09p32070' => 'bna', 'A09p37830' => 'bna', 'A09p42840' => 'bna', 'A09p42850' => 'bna', 'Aa31LG10G2060' => 'aar', 'Aa31LG2G7410' => 'aar', 'Aa31LG6G10200' => 'aar', 'Aa31LG6G16680' => 'aar', 'Aa31LG6G8470' => 'aar', 'Aa31LG9G12730' => 'aar', 'Aa31LG9G13680' => 'aar', 'Aa31LG9G14920' => 'aar', 'Aa31LG9G6650' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4977' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5467' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3254' => 'aag', 'Actinidia02578' => 'ach', 'Actinidia07693' => 'ach', 'Actinidia08413' => 'ach', 'Actinidia08414' => 'ach', 'Actinidia15289' => 'ach', 'Actinidia19871' => 'ach', 'Actinidia21475' => 'ach', 'Actinidia22576' => 'ach', 'Actinidia28327' => 'ach', 'Actinidia32491' => 'ach', 'Actinidia39463' => 'ach', 'Actinidia39571' => 'ach', 'Ah.01g013750' => 'amhyb', 'Ah.01g023210' => 'amhyb', 'Ah.04g164850' => 'amhyb', 'Ah.05g178060' => 'amhyb', 'Ah.07g204270' => 'amhyb', 'Ah.07g208480' => 'amhyb', 'Ah.09g237410' => 'amhyb', 'Ah.14g089460' => 'amhyb', 'AL1G41790' => 'aly', 'AL1G49050' => 'aly', 'AL1G53810' => 'aly', 'AL1G61400' => 'aly', 'AL4G18580' => 'aly', 'AL5G12510' => 'aly', 'AL5G12540' => 'aly', 'AL6G43230' => 'aly', 'AL7G10370' => 'aly', 'AL7G19250' => 'aly', 'AL8G12240' => 'aly', 'AL8G18540' => 'aly', 'Aqoxy1G02409' => 'aox', 'Aqoxy2G03993' => 'aox', 'Aqoxy3G03357' => 'aox', 'Aqoxy4G00785' => 'aox', 'Aqoxy5G02598' => 'aox', 'Aqoxy6G00132' => 'aox', 'Aqoxy7G01776' => 'aox', 'Aqoxy7G02316' => 'aox', 'Aqoxy7G03973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.12AFKW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B8730' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27IQR1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3F75VG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3RE0GA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41TCQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.527VTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FIR39' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5W8UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DA38EV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ63HS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H1I32C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HC27T5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4M8AP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7N3CZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9UVDZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LS1NQA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT1D4B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SKC4TM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCFV76' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF9Q1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQWD9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1ZM88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WE07RT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YCK7VH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJE6Q6' => 'arhy', 'AT1G28240' => 'ath', 'AT1G34550' => 'ath', 'AT1G53040' => 'ath', 'AT2G02910' => 'ath', 'AT4G09630' => 'ath', 'AT4G38500' => 'ath', 'AT5G42660' => 'ath', 'AT5G46220' => 'ath', 'ATR0152G026' => 'atr', 'ATR0564G343' => 'atr', 'ATR0706G151' => 'atr', 'ATR0733G207' => 'atr', 'ATR0751G234' => 'atr', 'ATR0807G048' => 'atr', 'ATR1091G084' => 'atr', 'Atru.chr10.1229' => 'acertr', 'Atru.chr10.1230' => 'acertr', 'Atru.chr10.1874' => 'acertr', 'Atru.chr11.1808' => 'acertr', 'Atru.chr13.1795' => 'acertr', 'Atru.chr13.570' => 'acertr', 'Atru.chr2.2608' => 'acertr', 'Atru.chr2.2609' => 'acertr', 'Atru.chr5.3428' => 'acertr', 'Atru.chr8.1171' => 'acertr', 'AUR62004651' => 'cqu', 'AUR62008675' => 'cqu', 'AUR62010014' => 'cqu', 'AUR62013004' => 'cqu', 'AUR62014825' => 'cqu', 'AUR62015015' => 'cqu', 'AUR62015151' => 'cqu', 'AUR62017020' => 'cqu', 'AUR62019422' => 'cqu', 'AUR62023570' => 'cqu', 'AUR62025571' => 'cqu', 'AUR62029098' => 'cqu', 'AUR62033863' => 'cqu', 'AUR62034296' => 'cqu', 'AUR62040075' => 'cqu', 'BcaB02g07334' => 'bca', 'BcaB02g10575' => 'bca', 'BcaB03g12119' => 'bca', 'BcaB03g12120' => 'bca', 'BcaB03g13945' => 'bca', 'BcaB04g17123' => 'bca', 'BcaB04g17867' => 'bca', 'BcaB04g19839' => 'bca', 'BcaB07g30317' => 'bca', 'BcaB07g32432' => 'bca', 'BcaB07g33362' => 'bca', 'BcaB08g36611' => 'bca', 'BcaC01g00028' => 'bca', 'BcaC01g01356' => 'bca', 'BcaC01g02034' => 'bca', 'BcaC01g06051' => 'bca', 'BcaC03g16839' => 'bca', 'BcaC03g17176' => 'bca', 'BcaC05g26829' => 'bca', 'BcaC06g31490' => 'bca', 'BcaC06g35344' => 'bca', 'BcaC06g36570' => 'bca', 'BcaC07g37537' => 'bca', 'BcaC08g43491' => 'bca', 'BcaC08g43773' => 'bca', 'BcaNung00234' => 'bca', 'BcaNung01982' => 'bca', 'BcaNung03707' => 'bca', 'BcaNung06454' => 'bca', 'BolC2t10762H' => 'bol', 'BolC2t11191H' => 'bol', 'BolC3t14322H' => 'bol', 'BolC3t19747H' => 'bol', 'BolC3t21425H' => 'bol', 'BolC4t27800H' => 'bol', 'BolC5t31423H' => 'bol', 'BolC6t35951H' => 'bol', 'BolC6t36282H' => 'bol', 'BolC7t40678H' => 'bol', 'BolC7t40679H' => 'bol', 'BolC7t42222H' => 'bol', 'BolC7t43492H' => 'bol', 'BolC7t46785H' => 'bol', 'BolC8t47853H' => 'bol', 'BolC9t56805H' => 'bol', 'BraA02t08000Z' => 'bra', 'BraA02t08341Z' => 'bra', 'BraA03t10936Z' => 'bra', 'BraA03t15657Z' => 'bra', 'BraA04t18100Z' => 'bra', 'BraA05t20523Z' => 'bra', 'BraA06t23353Z' => 'bra', 'BraA06t27473Z' => 'bra', 'BraA06t27769Z' => 'bra', 'BraA07t28928Z' => 'bra', 'BraA08t32236Z' => 'bra', 'BraA08t32841Z' => 'bra', 'BraA08t34524Z' => 'bra', 'BraA09t38742Z' => 'bra', 'BraA09t39295Z' => 'bra', 'C02p47180' => 'bna', 'C02p50990' => 'bna', 'C03p19360' => 'bna', 'C03p74950' => 'bna', 'C03p91000' => 'bna', 'C04p63260' => 'bna', 'C05p27050' => 'bna', 'C06p08750' => 'bna', 'C06p11490' => 'bna', 'C07p02820' => 'bna', 'C07p17180' => 'bna', 'C07p29440' => 'bna', 'C07p63730' => 'bna', 'C09p39260' => 'bna', 'CAN.G1164.34' => 'can', 'CAN.G1164.39' => 'can', 'CAN.G1530.3' => 'can', 'CAN.G162.61' => 'can', 'CAN.G176.6' => 'can', 'CAN.G289.49' => 'can', 'CAN.G370.21' => 'can', 'CAN.G370.22' => 'can', 'CAN.G371.117' => 'can', 'CAN.G58.37' => 'can', 'CAN.G588.98' => 'can', 'CANSAT21G2266' => 'cansat', 'CANSAT25G2799' => 'cansat', 'CANSAT35G0862' => 'cansat', 'CANSAT35G1704' => 'cansat', 'CANSAT35G1760' => 'cansat', 'CANSAT56G3971' => 'cansat', 'CANSAT56G4116' => 'cansat', 'CANSAT80G1259' => 'cansat', 'CARHR027730' => 'chi', 'CARHR033880' => 'chi', 'CARHR043270' => 'chi', 'CARHR145330' => 'chi', 'CARHR145340' => 'chi', 'CARHR175570' => 'chi', 'CARHR181570' => 'chi', 'CARHR258470' => 'chi', 'CARHR260490' => 'chi', 'CARHR294220' => 'chi', 'Carub.0001s2668' => 'cru', 'Carub.0001s3257' => 'cru', 'Carub.0001s4220' => 'cru', 'Carub.0005s0179' => 'cru', 'Carub.0006s2807' => 'cru', 'Carub.0007s0039' => 'cru', 'Carub.0008s0169' => 'cru', 'Carub.0008s0636' => 'cru', 'Ca_00338_v3' => 'car', 'Ca_00542_v3' => 'car', 'Ca_01844_v3' => 'car', 'Ca_10611_v3' => 'car', 'Ca_13326_v3' => 'car', 'Ca_17944_v3' => 'car', 'Ca_18546_v3' => 'car', 'Ca_24219_v3' => 'car', 'Ca_29972_v3' => 'car', 'CBR_g3681' => 'cbr', 'CBR_g40021' => 'cbr', 'Cc01_g08140' => 'ccan', 'Cc02_g13410' => 'ccan', 'Cc02_g37480' => 'ccan', 'Cc05_g12030' => 'ccan', 'Cc09_g03370' => 'ccan', 'Cc09_g10300' => 'ccan', 'Cc10_g03530' => 'ccan', 'Cc10_g11380' => 'ccan', 'CDE01G0176' => 'cde', 'CDE02G0675' => 'cde', 'CDE02G0942' => 'cde', 'CDE02G1153' => 'cde', 'CDE02G4177' => 'cde', 'CDE04G2117' => 'cde', 'CDE04G2736' => 'cde', 'CDE08G1161' => 'cde', 'CDE09G1238' => 'cde', 'Cfa000467' => 'cfa', 'Cfa000947' => 'cfa', 'Cfa004969' => 'cfa', 'Cfa005284' => 'cfa', 'Cfa008993' => 'cfa', 'Cfa018187' => 'cfa', 'Cfa018454' => 'cfa', 'Cfa020585' => 'cfa', 'Ciclev10000424m.g' => 'ccl', 'Ciclev10003605m.g' => 'ccl', 'Ciclev10007828m.g' => 'ccl', 'Ciclev10014620m.g' => 'ccl', 'Ciclev10015169m.g' => 'ccl', 'Ciclev10018291m.g' => 'ccl', 'Ciclev10028256m.g' => 'ccl', 'Ciclev10033822m.g' => 'ccl', 'CiPaw.05G060300' => 'cil', 'CiPaw.05G085000' => 'cil', 'CiPaw.06G083700' => 'cil', 'CiPaw.06G120300' => 'cil', 'CiPaw.09G060500' => 'cil', 'CiPaw.09G123800' => 'cil', 'CiPaw.11G169700' => 'cil', 'CiPaw.12G118300' => 'cil', 'CiPaw.15G071000' => 'cil', 'CiPaw.15G081900' => 'cil', 'ClCG01G024610' => 'cla', 'ClCG03G006070' => 'cla', 'ClCG05G019250' => 'cla', 'ClCG09G009500' => 'cla', 'ClCG11G008200' => 'cla', 'ClCG11G018080' => 'cla', 'COL.COLO4_17373' => 'col', 'COL.COLO4_22994' => 'col', 'COL.COLO4_26389' => 'col', 'COL.COLO4_27170' => 'col', 'COL.COLO4_31074' => 'col', 'COL.COLO4_31465' => 'col', 'COL.COLO4_36438' => 'col', 'COL.COLO4_36439' => 'col', 'Cpa.g.c38781' => 'cpa', 'Cpa.g.sc128.12' => 'cpa', 'Cpa.g.sc166.7' => 'cpa', 'Cpa.g.sc166.8' => 'cpa', 'Cpa.g.sc20.111' => 'cpa', 'Cpa.g.sc27.31' => 'cpa', 'Cpa.g.sc64.36' => 'cpa', 'Cpa.g.sc64.37' => 'cpa', 'Cpa.g.sc66.49' => 'cpa', 'Cpa.g.sc80.64' => 'cpa', 'CsaV3_1G012320' => 'csa', 'CsaV3_2G008480' => 'csa', 'CsaV3_2G033450' => 'csa', 'CsaV3_3G044830' => 'csa', 'CsaV3_4G033710' => 'csa', 'CsaV3_6G051730' => 'csa', 'CsaV3_7G025350' => 'csa', 'CSS0001067' => 'camsi', 'CSS0005996' => 'camsi', 'CSS0006590' => 'camsi', 'CSS0009673' => 'camsi', 'CSS0010201' => 'camsi', 'CSS0010549' => 'camsi', 'CSS0011364' => 'camsi', 'CSS0014473' => 'camsi', 'CSS0014961' => 'camsi', 'CSS0020191' => 'camsi', 'CSS0021165' => 'camsi', 'CSS0022306' => 'camsi', 'CSS0030591' => 'camsi', 'CSS0030696' => 'camsi', 'CSS0032653' => 'camsi', 'CSS0037487' => 'camsi', 'CSS0041102' => 'camsi', 'CSS0041261' => 'camsi', 'CSS0046246' => 'camsi', 'CSS0049256' => 'camsi', 'DCAR_004075' => 'dca', 'DCAR_011538' => 'dca', 'DCAR_019553' => 'dca', 'DCAR_020952' => 'dca', 'DCAR_021739' => 'dca', 'DCAR_027407' => 'dca', 'DCAR_027913' => 'dca', 'DCAR_028066' => 'dca', 'Dinv05899' => 'din', 'Dinv07563' => 'din', 'Dinv08010' => 'din', 'Dinv14125' => 'din', 'Dinv20172' => 'din', 'Dinv30743' => 'din', 'Dinv31229' => 'din', 'Dinv34162' => 'din', 'Dinv36028' => 'din', 'Dinv39368' => 'din', 'Dinv40565' => 'din', 'Dinv41706' => 'din', 'Duzib052G0089' => 'dzi', 'Duzib116G0641' => 'dzi', 'Duzib132G0069' => 'dzi', 'Duzib132G1219' => 'dzi', 'Duzib147G0278' => 'dzi', 'Duzib160G0480' => 'dzi', 'Duzib170G0661' => 'dzi', 'Duzib177G0591' => 'dzi', 'Duzib187G1353' => 'dzi', 'Duzib192G0858' => 'dzi', 'Duzib192G0883' => 'dzi', 'Duzib213G0506' => 'dzi', 'Duzib235G0289' => 'dzi', 'Duzib251G0422' => 'dzi', 'ECA232G3898' => 'eca', 'ECA233G5950' => 'eca', 'ECA234G1699' => 'eca', 'ECA234G2421' => 'eca', 'ECA236G0426' => 'eca', 'ECA236G4331' => 'eca', 'ECA248G2573' => 'eca', 'EL10Ac1g00077' => 'bvu', 'EL10Ac1g01746' => 'bvu', 'EL10Ac2g03464' => 'bvu', 'EL10Ac4g08176' => 'bvu', 'EL10Ac7g17521' => 'bvu', 'EL10Ac8g20386' => 'bvu', 'EL10Ac9g21343' => 'bvu', 'EL10Ac9g22688' => 'bvu', 'Eucgr.B03434' => 'egr', 'Eucgr.D00618' => 'egr', 'Eucgr.E02395' => 'egr', 'Eucgr.F01129' => 'egr', 'Eucgr.F02622' => 'egr', 'Eucgr.F04207' => 'egr', 'FAN01G0570' => 'fan', 'FAN03G3351' => 'fan', 'FAN06G3702' => 'fan', 'FAN07G2149' => 'fan', 'FAN10G3758' => 'fan', 'FAN11G1170' => 'fan', 'FAN11G2050' => 'fan', 'FAN11G2724' => 'fan', 'FAN12G1700' => 'fan', 'FAN12G2028' => 'fan', 'FAN15G1160' => 'fan', 'FAN15G3063' => 'fan', 'FAN16G2540' => 'fan', 'FAN16G3077' => 'fan', 'FAN16G3624' => 'fan', 'FAN17G0221' => 'fan', 'FAN20G2492' => 'fan', 'FAN20G2905' => 'fan', 'FAN21G0548' => 'fan', 'FAN21G1300' => 'fan', 'FAN22G0077' => 'fan', 'FAN22G1315' => 'fan', 'FAN24G1280' => 'fan', 'FAN24G1445' => 'fan', 'FAN24G3527' => 'fan', 'FAN25G0464' => 'fan', 'FAN25G2885' => 'fan', 'FAN25G3270' => 'fan', 'FAN27G1101' => 'fan', 'FAN27G2846' => 'fan', 'FAN27G3524' => 'fan', 'FvH4_2g11770' => 'fve', 'FvH4_2g15630' => 'fve', 'FvH4_3g05570' => 'fve', 'FvH4_3g09110' => 'fve', 'FvH4_3g19940' => 'fve', 'FvH4_4g04821' => 'fve', 'FvH4_4g31480' => 'fve', 'FvH4_7g01740' => 'fve', 'Glyma.05G130400' => 'gma', 'Glyma.05G156400' => 'gma', 'Glyma.07G197000' => 'gma', 'Glyma.08G085151' => 'gma', 'Glyma.08G114500' => 'gma', 'Glyma.08G300400' => 'gma', 'Glyma.10G215800' => 'gma', 'Glyma.12G224400' => 'gma', 'Glyma.13G179300' => 'gma', 'Glyma.13G218151' => 'gma', 'Glyma.13G238800' => 'gma', 'Glyma.13G276900' => 'gma', 'Glyma.14G078200' => 'gma', 'Glyma.15G074500' => 'gma', 'Glyma.15G094100' => 'gma', 'Glyma.17G247200' => 'gma', 'Glyma.18G120100' => 'gma', 'Glyma.20G176000' => 'gma', 'Gohir.A01G063600' => 'ghi', 'Gohir.A01G170301' => 'ghi', 'Gohir.A02G060500' => 'ghi', 'Gohir.A05G133850' => 'ghi', 'Gohir.A05G161400' => 'ghi', 'Gohir.A06G012900' => 'ghi', 'Gohir.A06G035901' => 'ghi', 'Gohir.A06G127100' => 'ghi', 'Gohir.A06G210500' => 'ghi', 'Gohir.A08G008650' => 'ghi', 'Gohir.A09G072700' => 'ghi', 'Gohir.A09G088301' => 'ghi', 'Gohir.A10G040600' => 'ghi', 'Gohir.A12G036300' => 'ghi', 'Gohir.A12G143350' => 'ghi', 'Gohir.A12G165500' => 'ghi', 'Gohir.A13G145700' => 'ghi', 'Gohir.D01G050000' => 'ghi', 'Gohir.D01G051366' => 'ghi', 'Gohir.D01G161350' => 'ghi', 'Gohir.D02G065900' => 'ghi', 'Gohir.D05G164200' => 'ghi', 'Gohir.D05G355500' => 'ghi', 'Gohir.D06G010400' => 'ghi', 'Gohir.D06G111250' => 'ghi', 'Gohir.D06G132000' => 'ghi', 'Gohir.D06G210500' => 'ghi', 'Gohir.D07G165675' => 'ghi', 'Gohir.D08G062240' => 'ghi', 'Gohir.D08G086101' => 'ghi', 'Gohir.D08G138060' => 'ghi', 'Gohir.D09G072300' => 'ghi', 'Gohir.D10G041400' => 'ghi', 'Gohir.D11G191020' => 'ghi', 'Gohir.D11G212066' => 'ghi', 'Gohir.D12G036300' => 'ghi', 'Gohir.D12G168600' => 'ghi', 'Gohir.D13G150600' => 'ghi', 'Gorai.001G057300' => 'gra', 'Gorai.002G069900' => 'gra', 'Gorai.002G200000' => 'gra', 'Gorai.003G067600' => 'gra', 'Gorai.005G074800' => 'gra', 'Gorai.006G087300' => 'gra', 'Gorai.008G037500' => 'gra', 'Gorai.008G181400' => 'gra', 'Gorai.009G169400' => 'gra', 'Gorai.009G387900' => 'gra', 'Gorai.010G013300' => 'gra', 'Gorai.010G153800' => 'gra', 'Gorai.010G255800' => 'gra', 'Gorai.011G043700' => 'gra', 'Gorai.011G198900' => 'gra', 'Gorai.013G168400' => 'gra', 'GSVIVG01005212001' => 'vvi', 'GSVIVG01006163001' => 'vvi', 'GSVIVG01009625001' => 'vvi', 'GSVIVG01014338001' => 'vvi', 'GSVIVG01020005001' => 'vvi', 'GSVIVG01021450001' => 'vvi', 'GSVIVG01023975001' => 'vvi', 'GSVIVG01034490001' => 'vvi', 'HanXRQChr04g0112071' => 'han', 'HanXRQChr05g0131151' => 'han', 'HanXRQChr09g0262371' => 'han', 'HanXRQChr09g0268401' => 'han', 'HanXRQChr10g0279241' => 'han', 'HanXRQChr10g0297961' => 'han', 'HanXRQChr11g0326231' => 'han', 'HanXRQChr11g0328471' => 'han', 'HanXRQChr16g0507941' => 'han', 'HanXRQChr17g0560211' => 'han', 'Haze_02108' => 'cav', 'Haze_02428' => 'cav', 'Haze_05593' => 'cav', 'Haze_06448' => 'cav', 'Haze_09427' => 'cav', 'Haze_12022' => 'cav', 'Haze_17612' => 'cav', 'Haze_17928' => 'cav', 'Hma1.2p1_0032F.1_g019250' => 'hma', 'Hma1.2p1_0163F.1_g072690' => 'hma', 'Hma1.2p1_0265F.1_g106710' => 'hma', 'Hma1.2p1_0286F.1_g113970' => 'hma', 'Hma1.2p1_0363F.1_g136640' => 'hma', 'Hma1.2p1_0584F.1_g183470' => 'hma', 'Hma1.2p1_0885F.1_g232570' => 'hma', 'HPP92_006022' => 'vpl', 'HPP92_007320' => 'vpl', 'HPP92_011521' => 'vpl', 'HPP92_019387' => 'vpl', 'HPP92_024038' => 'vpl', 'Hund05891' => 'sun', 'Hund06450' => 'sun', 'Hund12053' => 'sun', 'Hund16800' => 'sun', 'Hund21222' => 'sun', 'Hund22896' => 'sun', 'Hund23746' => 'sun', 'Hund27083' => 'sun', 'Lalb_Chr02g0141831' => 'lal', 'Lalb_Chr02g0141841' => 'lal', 'Lalb_Chr05g0220411' => 'lal', 'Lalb_Chr06g0162081' => 'lal', 'Lalb_Chr09g0327651' => 'lal', 'Lalb_Chr13g0295051' => 'lal', 'Lalb_Chr15g0086801' => 'lal', 'Lalb_Chr16g0383781' => 'lal', 'Lalb_Chr16g0383791' => 'lal', 'Lalb_Chr18g0055441' => 'lal', 'Lalb_Chr18g0059611' => 'lal', 'Lalb_Chr20g0109661' => 'lal', 'Lalb_Chr20g0109831' => 'lal', 'Lalb_Chr20g0121871' => 'lal', 'Lalb_Chr22g0355361' => 'lal', 'Lalb_Chr25g0286371' => 'lal', 'Lj1A1187G43' => 'lonja', 'Lj1A1205T50' => 'lonja', 'Lj1A800G33' => 'lonja', 'Lj1C1187T7' => 'lonja', 'Lj1C843T11' => 'lonja', 'Lj1g0010940' => 'lja', 'Lj2A288T69' => 'lonja', 'Lj3g0024276' => 'lja', 'Lj4A47T76' => 'lonja', 'Lj4g0005805' => 'lja', 'Lj4g0006097' => 'lja', 'Lj4g0008528' => 'lja', 'Lj4g0024907' => 'lja', 'Lj5g0012472' => 'lja', 'Lj5g0018648' => 'lja', 'Lj6C789G1' => 'lonja', 'Lj6g0004000' => 'lja', 'Lj7A292G67' => 'lonja', 'Lj7A292T64' => 'lonja', 'Lj9A400T58' => 'lonja', 'Lsat_1_v5_gn_1_126181' => 'lsa', 'Lsat_1_v5_gn_4_123041' => 'lsa', 'Lsat_1_v5_gn_4_133620' => 'lsa', 'Lsat_1_v5_gn_4_53221' => 'lsa', 'Lsat_1_v5_gn_4_71961' => 'lsa', 'Lsat_1_v5_gn_7_105241' => 'lsa', 'Lsat_1_v5_gn_7_21361' => 'lsa', 'Lsat_1_v5_gn_7_28860' => 'lsa', 'Lsat_1_v5_gn_7_31260' => 'lsa', 'Lsat_1_v5_gn_8_52801' => 'lsa', 'Manes.02G191400' => 'mes', 'Manes.03G110100' => 'mes', 'Manes.04G071100' => 'mes', 'Manes.05G100500' => 'mes', 'Manes.05G164700' => 'mes', 'Manes.15G087000' => 'mes', 'Manes.15G121500' => 'mes', 'Manes.16G028300' => 'mes', 'Manes.17G046100' => 'mes', 'Manes.17G069800' => 'mes', 'Manes.18G100500' => 'mes', 'Mapoly0002s0109' => 'mpo', 'Mapoly0024s0007' => 'mpo', 'Mapoly0089s0032' => 'mpo', 'MBI04_g42241_MAGBIO' => 'mbi', 'MBI05_g11988_MAGBIO' => 'mbi', 'MBI05_g35452_MAGBIO' => 'mbi', 'MBI07_g30179_MAGBIO' => 'mbi', 'MBI07_g35859_MAGBIO' => 'mbi', 'MBI07_g35860_MAGBIO' => 'mbi', 'MBI07_g37166_MAGBIO' => 'mbi', 'MBI08_g18172_MAGBIO' => 'mbi', 'MBI09_g08441_MAGBIO' => 'mbi', 'MBI13_g01676_MAGBIO' => 'mbi', 'MBI14_g42955_MAGBIO' => 'mbi', 'MBI16_g13161_MAGBIO' => 'mbi', 'MBI17_g27204_MAGBIO' => 'mbi', 'MBI19_g21595_MAGBIO' => 'mbi', 'MD00G1148400' => 'mdo', 'MD02G1301200' => 'mdo', 'MD03G1227800' => 'mdo', 'MD05G1041100' => 'mdo', 'MD05G1124800' => 'mdo', 'MD05G1284000' => 'mdo', 'MD05G1338800' => 'mdo', 'MD05G1338900' => 'mdo', 'MD07G1022800' => 'mdo', 'MD10G1047500' => 'mdo', 'MD10G1127500' => 'mdo', 'MD10G1262300' => 'mdo', 'MD10G1293800' => 'mdo', 'MD16G1074300' => 'mdo', 'Medtr1g021670' => 'mtr', 'Medtr1g096320' => 'mtr', 'Medtr2g013690' => 'mtr', 'Medtr2g019450' => 'mtr', 'Medtr2g085170' => 'mtr', 'Medtr4g088785' => 'mtr', 'Medtr8g055930' => 'mtr', 'Medtr8g085850' => 'mtr', 'MELO3C002605.2' => 'cme', 'MELO3C003891.2' => 'cme', 'MELO3C004012.2' => 'cme', 'MELO3C007134.2' => 'cme', 'MELO3C008118.2' => 'cme', 'MELO3C016700.2' => 'cme', 'MELO3C024127.2' => 'cme', 'MELO3C033361.2' => 'cme', 'MELO3C033362.2' => 'cme', 'Migut.C00430' => 'egut', 'Migut.C01246' => 'egut', 'Migut.E00101' => 'egut', 'Migut.H01486' => 'egut', 'Migut.H01939' => 'egut', 'Migut.K00360' => 'egut', 'Migut.M00910' => 'egut', 'Migut.M01139' => 'egut', 'Migut.N02677' => 'egut', 'MSTRG.13252' => 'ama', 'MSTRG.14701' => 'ama', 'MSTRG.1521' => 'ama', 'MSTRG.15884' => 'ama', 'MSTRG.16242' => 'ama', 'MSTRG.22285' => 'ama', 'MSTRG.22444' => 'ama', 'MSTRG.2349' => 'ama', 'MSTRG.26308' => 'ama', 'MSTRG.28296' => 'ama', 'MSTRG.9895' => 'ama', 'Nitab4.5_0000110g0060' => 'nta', 'Nitab4.5_0000420g0130' => 'nta', 'Nitab4.5_0000422g0030' => 'nta', 'Nitab4.5_0000560g0180' => 'nta', 'Nitab4.5_0000703g0100' => 'nta', 'Nitab4.5_0000786g0200' => 'nta', 'Nitab4.5_0001336g0020' => 'nta', 'Nitab4.5_0001796g0030' => 'nta', 'Nitab4.5_0003348g0060' => 'nta', 'Nitab4.5_0003698g0040' => 'nta', 'Nitab4.5_0003942g0090' => 'nta', 'Nitab4.5_0004775g0070' => 'nta', 'Nitab4.5_0004864g0030' => 'nta', 'Nitab4.5_0005615g0020' => 'nta', 'Nitab4.5_0009288g0030' => 'nta', 'Nitab4.5_0009341g0010' => 'nta', 'Nitab4.5_0009535g0010' => 'nta', 'Nn1g03995' => 'nnu', 'Nn1g04100' => 'nnu', 'Nn1g06530' => 'nnu', 'Nn3g16404' => 'nnu', 'Nn3g17212' => 'nnu', 'Nn3g20776' => 'nnu', 'Nn3g21923' => 'nnu', 'Nn5g27737' => 'nnu', 'Nn5g29461' => 'nnu', 'Nn7g38355' => 'nnu', 'Nn8g39873' => 'nnu', 'Oeu000548.2' => 'oeu', 'Oeu004672.1' => 'oeu', 'Oeu015605.2' => 'oeu', 'Oeu016092.1' => 'oeu', 'Oeu017879.3' => 'oeu', 'Oeu024910.1' => 'oeu', 'Oeu028965.1' => 'oeu', 'Oeu031269.1' => 'oeu', 'Oeu031270.1' => 'oeu', 'Oeu032535.1' => 'oeu', 'Oeu034151.1' => 'oeu', 'Oeu034152.1' => 'oeu', 'Oeu034588.2' => 'oeu', 'Oeu050846.1' => 'oeu', 'Oeu050849.2' => 'oeu', 'Oeu051063.2' => 'oeu', 'Oeu052368.1' => 'oeu', 'Oeu052370.1' => 'oeu', 'Os01g0210400' => 'osa', 'Os01g0304300' => 'osa', 'Os01g0749100' => 'osa', 'Os02g0745800' => 'osa', 'Os03g0769050' => 'osa', 'Os05g0531500' => 'osa', 'Os06g0724300' => 'osa', 'Os11g0198100' => 'osa', 'Peaxi162Scf00069g01425' => 'pax', 'Peaxi162Scf00280g00811' => 'pax', 'Peaxi162Scf00310g00615' => 'pax', 'Peaxi162Scf00362g00542' => 'pax', 'Peaxi162Scf00461g00310' => 'pax', 'Peaxi162Scf00530g00118' => 'pax', 'Peaxi162Scf00541g00057' => 'pax', 'Peaxi162Scf00661g00017' => 'pax', 'Peaxi162Scf00926g00027' => 'pax', 'Peaxi162Scf01064g00263' => 'pax', 'Peaxi162Scf01211g00135' => 'pax', 'PGR004G2336' => 'pgr', 'PGR042G0327' => 'pgr', 'PGR042G1957' => 'pgr', 'PGR042G2003' => 'pgr', 'PGR042G3929' => 'pgr', 'PGR083G1137' => 'pgr', 'PGR083G1364' => 'pgr', 'PGSC0003DMG400003381' => 'stu', 'PGSC0003DMG400003417' => 'stu', 'PGSC0003DMG400008981' => 'stu', 'PGSC0003DMG400012417' => 'stu', 'PGSC0003DMG400012823' => 'stu', 'PGSC0003DMG400016885' => 'stu', 'PGSC0003DMG400022812' => 'stu', 'PGSC0003DMG400029726' => 'stu', 'PGSC0003DMG401009243' => 'stu', 'PGSC0003DMG401031505' => 'stu', 'PGSC0003DMG402031505' => 'stu', 'Phvul.001G017600' => 'pvu', 'Phvul.002G193500' => 'pvu', 'Phvul.002G228900' => 'pvu', 'Phvul.002G236800' => 'pvu', 'Phvul.003G049500' => 'pvu', 'Phvul.005G072000' => 'pvu', 'Phvul.006G164800' => 'pvu', 'Phvul.006G185100' => 'pvu', 'Phvul.007G090000' => 'pvu', 'Potri.001G399800' => 'ptr', 'Potri.002G149900' => 'ptr', 'Potri.004G044100' => 'ptr', 'Potri.004G177600' => 'ptr', 'Potri.009G138000' => 'ptr', 'Potri.010G094000' => 'ptr', 'Potri.011G053000' => 'ptr', 'Potri.011G119300' => 'ptr', 'Potri.013G113700' => 'ptr', 'Potri.018G107800' => 'ptr', 'Potri.019G084100' => 'ptr', 'Pp3c14_23720' => 'ppa', 'Pp3c16_6340' => 'ppa', 'Pp3c23_13420' => 'ppa', 'Pp3c24_2740' => 'ppa', 'Pp3c25_860' => 'ppa', 'Pp3c8_21750' => 'ppa', 'Prupe.1G273000' => 'ppe', 'Prupe.1G273700' => 'ppe', 'Prupe.1G274100' => 'ppe', 'Prupe.2G023300' => 'ppe', 'Prupe.4G048000' => 'ppe', 'Prupe.4G080400' => 'ppe', 'Prupe.4G181200' => 'ppe', 'Prupe.8G056900' => 'ppe', 'Prupe.8G168700' => 'ppe', 'Psat1g189080' => 'psa', 'Psat1g204760' => 'psa', 'Psat4g175560' => 'psa', 'Psat4g177720' => 'psa', 'Psat5g244240' => 'psa', 'Psat6g010720' => 'psa', 'Psat6g187200' => 'psa', 'Psat7g072040' => 'psa', 'PSO017G3501' => 'pso', 'PSO063G2148' => 'pso', 'PSO063G5608' => 'pso', 'PSO210G6392' => 'pso', 'PSO541G2319' => 'pso', 'PSO541G2836' => 'pso', 'PSO541G4012' => 'pso', 'PSO541G6253' => 'pso', 'PSO675G0580' => 'pso', 'PSO675G0856' => 'pso', 'PSO675G5635' => 'pso', 'PSO675G9157' => 'pso', 'PSO832G1660' => 'pso', 'PSO832G1969' => 'pso', 'QL02p007186' => 'qlo', 'QL02p033904' => 'qlo', 'QL03p064391' => 'qlo', 'QL05p040593' => 'qlo', 'QL05p058242' => 'qlo', 'QL08p021825' => 'qlo', 'QL11p004981' => 'qlo', 'RcHm_v2.0_Chr1g0318301' => 'rch', 'RcHm_v2.0_Chr4g0418501' => 'rch', 'RcHm_v2.0_Chr4g0439971' => 'rch', 'RcHm_v2.0_Chr5g0008541' => 'rch', 'RcHm_v2.0_Chr5g0014101' => 'rch', 'RcHm_v2.0_Chr5g0014131' => 'rch', 'RcHm_v2.0_Chr5g0033621' => 'rch', 'RcHm_v2.0_Chr6g0272041' => 'rch', 'RcHm_v2.0_Chr6g0278831' => 'rch', 'Rhsim02G0130400' => 'rsi', 'Rhsim02G0171100' => 'rsi', 'Rhsim05G0053000' => 'rsi', 'Rhsim05G0053100' => 'rsi', 'Rhsim06G0096500' => 'rsi', 'Rhsim06G0096600' => 'rsi', 'Rhsim06G0199100' => 'rsi', 'Rhsim12G0062300' => 'rsi', 'Rhsim12G0062800' => 'rsi', 'Sabra02G0118600' => 'sbr', 'Sabra04G0027300' => 'sbr', 'Sabra04G0119500' => 'sbr', 'Sabra08G0112500' => 'sbr', 'Sabra11G0036800' => 'sbr', 'Sabra11G0103800' => 'sbr', 'Sabra13G0096300' => 'sbr', 'Sabra16G0262300' => 'sbr', 'Sabra18G0091700' => 'sbr', 'Sabra19G0095400' => 'sbr', 'SalBow6G3080' => 'sbo', 'SalBow7G1157' => 'sbo', 'SalBow7G2123' => 'sbo', 'SalBow7G2285' => 'sbo', 'SalBow7G3537' => 'sbo', 'SalBow8G2947' => 'sbo', 'SalBow8G4463' => 'sbo', 'SalBow8G5466' => 'sbo', 'Sc01g0001750' => 'sci', 'Sc02g0006640' => 'sci', 'Sc02g0006670' => 'sci', 'Sc04g0008220' => 'sci', 'Sc05g0006190' => 'sci', 'Sc08g0002760' => 'sci', 'Sc17g0006170' => 'sci', 'Sc22g0002050' => 'sci', 'Sc23g0001190' => 'sci', 'Sc24g0000980' => 'sci', 'Sed0006245' => 'sed', 'Sed0007543' => 'sed', 'Sed0009411' => 'sed', 'Sed0010765' => 'sed', 'Sed0012944' => 'sed', 'Sed0014682' => 'sed', 'Sed0016174' => 'sed', 'Sed0016796' => 'sed', 'Sed0020317' => 'sed', 'Sed0021467' => 'sed', 'SEGI_01316' => 'sgi', 'SEGI_03374' => 'sgi', 'SEGI_16265' => 'sgi', 'SEGI_18569' => 'sgi', 'SEGI_20351' => 'sgi', 'SEGI_26395' => 'sgi', 'SEGI_29469' => 'sgi', 'SEGI_34771' => 'sgi', 'SEGI_36769' => 'sgi', 'SEGI_37139' => 'sgi', 'SGA_v2.0_scaffold100G29687' => 'sas', 'SGA_v2.0_scaffold118G32472' => 'sas', 'SGA_v2.0_scaffold14G07051' => 'sas', 'SGA_v2.0_scaffold183G39845' => 'sas', 'SGA_v2.0_scaffold1G00174' => 'sas', 'SGA_v2.0_scaffold22G09714' => 'sas', 'SGA_v2.0_scaffold333G48992' => 'sas', 'SGA_v2.0_scaffold46G17491' => 'sas', 'SGA_v2.0_scaffold49G18294' => 'sas', 'SGA_v2.0_scaffold63G21658' => 'sas', 'SHI01741' => 'shi', 'SHI05771' => 'shi', 'SHI18077' => 'shi', 'SHI20525' => 'shi', 'SHI20527' => 'shi', 'SHI20528' => 'shi', 'SMO172G0185' => 'smo', 'SMO198G0020' => 'smo', 'SMO351G0006' => 'smo', 'SMO356G0118' => 'smo', 'SMO358G0296' => 'smo', 'SMO367G0079' => 'smo', 'SMO367G1277' => 'smo', 'Solyc01g014220.3' => 'sly', 'Solyc01g111770.2' => 'sly', 'Solyc02g078180.3' => 'sly', 'Solyc03g006430.3' => 'sly', 'Solyc03g006456.1' => 'sly', 'Solyc03g079860.2' => 'sly', 'Solyc04g079770.3' => 'sly', 'Solyc05g007430.4' => 'sly', 'Solyc07g063150.3' => 'sly', 'Solyc08g016620.3' => 'sly', 'Solyc09g057590.3' => 'sly', 'Solyc09g057600.1' => 'sly', 'Solyc10g009050.3' => 'sly', 'Solyc11g017420.2' => 'sly', 'Sopen01g053810' => 'spe', 'Sopen02g023040' => 'spe', 'Sopen03g002440' => 'spe', 'Sopen04g033350' => 'spe', 'Sopen05g003310' => 'spe', 'Sopen07g004050' => 'spe', 'Sopen07g031340' => 'spe', 'Sopen08g006990' => 'spe', 'Sopen10g004830' => 'spe', 'Sopen11g009370' => 'spe', 'Sp1g24450' => 'spa', 'Sp1g29670' => 'spa', 'Sp1g39600' => 'spa', 'Sp2g11080' => 'spa', 'Sp2g13970' => 'spa', 'Sp4g16130' => 'spa', 'Sp6g13080' => 'spa', 'Sp7g37270' => 'spa', 'TAR371G0065' => 'tar', 'TAR376G0340' => 'tar', 'TAR376G0435' => 'tar', 'TAR381G0002' => 'tar', 'TAR381G1236' => 'tar', 'TAR624G0055' => 'tar', 'TAR624G0324' => 'tar', 'TAR624G0696' => 'tar', 'TAR624G0906' => 'tar', 'TAR625G0107' => 'tar', 'TAR626G0015' => 'tar', 'TAR626G1356' => 'tar', 'TAR627G0888' => 'tar', 'TAR628G0399' => 'tar', 'TAR628G1327' => 'tar', 'TAR629G2831' => 'tar', 'TAR629G2874' => 'tar', 'TAR633G1432' => 'tar', 'TAR633G2771' => 'tar', 'THA.LOC104803394' => 'tha', 'THA.LOC104805153' => 'tha', 'THA.LOC104806784' => 'tha', 'THA.LOC104810473' => 'tha', 'THA.LOC104813100' => 'tha', 'THA.LOC104814215' => 'tha', 'THA.LOC104815554' => 'tha', 'THA.LOC104820544' => 'tha', 'THA.LOC104824754' => 'tha', 'THA.LOC104827717' => 'tha', 'Thecc.02G031400' => 'tca', 'Thecc.02G055900' => 'tca', 'Thecc.02G350800' => 'tca', 'Thecc.06G150900' => 'tca', 'Thecc.06G186600' => 'tca', 'Thecc.07G089600' => 'tca', 'Thecc.08G020400' => 'tca', 'Thecc.08G182100' => 'tca', 'Thhalv10000873m.g' => 'esa', 'Thhalv10004185m.g' => 'esa', 'Thhalv10006981m.g' => 'esa', 'Thhalv10007204m.g' => 'esa', 'Thhalv10011374m.g' => 'esa', 'Thhalv10013482m.g' => 'esa', 'Thhalv10017801m.g' => 'esa', 'Thhalv10024983m.g' => 'esa', 'TPR.G12072' => 'tpr', 'TPR.G15769' => 'tpr', 'TPR.G16504' => 'tpr', 'TPR.G16506' => 'tpr', 'TPR.G24345' => 'tpr', 'TPR.G26666' => 'tpr', 'TPR.G27320' => 'tpr', 'TPR.G31819' => 'tpr', 'TPR.G38879' => 'tpr', 'TPR.G39015' => 'tpr', 'TPR.G8819' => 'tpr', 'TWI09G0924' => 'twi', 'TWI12G0811' => 'twi', 'TWI12G1294' => 'twi', 'TWI31G0150' => 'twi', 'TWI36G1262' => 'twi', 'TWI38G1287' => 'twi', 'TWI38G1633' => 'twi', 'TWI38G1982' => 'twi', 'TWI39G0116' => 'twi', 'TWI60G1011' => 'twi', 'TWI63G0171' => 'twi', 'TWI73G0839' => 'twi', 'TWI79G1511' => 'twi', 'unitig_0.g915' => 'ugi', 'unitig_0.g916' => 'ugi', 'unitig_21.g20219' => 'ugi', 'unitig_21.g20416' => 'ugi', 'unitig_578.g16132' => 'ugi', 'unitig_578.g16718' => 'ugi', 'unitig_62.g23481' => 'ugi', 'unitig_744.g24535' => 'ugi', 'unitig_749.g13525' => 'ugi', 'vmacro01248' => 'vma', 'vmacro02290' => 'vma', 'vmacro10946' => 'vma', 'vmacro11865' => 'vma', 'vmacro12493' => 'vma', 'vmacro17322' => 'vma', 'vmacro21599' => 'vma', 'vmacro23041' => 'vma', 'VMungo0251G0004' => 'vmu', 'VMungo0251G2639' => 'vmu', 'VMungo0251G2967' => 'vmu', 'VMungo0540G0864' => 'vmu', 'VMungo0540G1569' => 'vmu', 'VMungo0647G0317' => 'vmu', 'VMungo0720G1373' => 'vmu', 'VMungo0720G1508' => 'vmu', 'VMungo1080G0485' => 'vmu', 'VMungo1215G3177' => 'vmu', 'Zm00001eb112600' => 'zma', 'Zm00001eb120220' => 'zma', 'Zm00001eb153240' => 'zma', 'Zm00001eb168880' => 'zma', 'Zm00001eb213920' => 'zma', 'Zm00001eb228280' => 'zma', 'Zm00001eb254580' => 'zma', 'Zm00001eb272180' => 'zma', 'Zm00001eb293190' => 'zma', 'Zm00001eb322930' => 'zma', 'Zm00001eb353360' => 'zma', 'Zm00001eb353390' => 'zma', 'Zm00001eb353430' => 'zma', 'Zm00001eb353440' => 'zma', 'Zm00001eb353780' => 'zma' ) $gf_id = 'HOM05D000499' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000499' ) $data_identifier = 'HOM05D000499' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 29, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 12, 'amhyb' => (int) 8, 'aly' => (int) 12, 'aox' => (int) 9, 'arhy' => (int) 26, 'ath' => (int) 8, 'atr' => (int) 7, 'acertr' => (int) 10, 'cqu' => (int) 15, 'bca' => (int) 29, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 11, 'cansat' => (int) 8, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 9, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 8, 'cpa' => (int) 10, 'csa' => (int) 7, 'camsi' => (int) 20, 'dca' => (int) 8, 'din' => (int) 12, 'dzi' => (int) 14, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 6, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 38, 'gra' => (int) 16, 'vvi' => (int) 8, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 5, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 11, 'lja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 11, 'mpo' => (int) 3, 'mbi' => (int) 14, 'mdo' => (int) 14, 'mtr' => (int) 8, 'cme' => (int) 9, 'egut' => (int) 9, 'ama' => (int) 11, 'nta' => (int) 17, 'nnu' => (int) 11, 'oeu' => (int) 18, 'osa' => (int) 8, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 6, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 9, 'rsi' => (int) 9, 'sbr' => (int) 10, 'sbo' => (int) 8, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 10, 'sas' => (int) 10, 'shi' => (int) 6, 'smo' => (int) 7, 'sly' => (int) 14, 'spe' => (int) 10, 'spa' => (int) 8, 'tar' => (int) 19, 'tha' => (int) 10, 'tca' => (int) 8, 'esa' => (int) 8, 'tpr' => (int) 11, 'twi' => (int) 13, 'ugi' => (int) 9, 'vma' => (int) 8, 'vmu' => (int) 10, 'zma' => (int) 15 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb353780' $species_info = array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ) $local_species = 'bvu' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000499', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1066', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p29780' => 'bna', 'A02p33180' => 'bna', 'A03p16470' => 'bna', 'A03p66010' => 'bna', 'A04p25970' => 'bna', 'A06p01270' => 'bna', 'A06p46080' => 'bna', 'A07p11400' => 'bna', 'A08p01840' => 'bna', 'A08p08230' => 'bna', 'A08p25740' => 'bna', 'A09p32070' => 'bna', 'A09p37830' => 'bna', 'A09p42840' => 'bna', 'A09p42850' => 'bna', 'Aa31LG10G2060' => 'aar', 'Aa31LG2G7410' => 'aar', 'Aa31LG6G10200' => 'aar', 'Aa31LG6G16680' => 'aar', 'Aa31LG6G8470' => 'aar', 'Aa31LG9G12730' => 'aar', 'Aa31LG9G13680' => 'aar', 'Aa31LG9G14920' => 'aar', 'Aa31LG9G6650' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4977' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5467' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3254' => 'aag', 'Actinidia02578' => 'ach', 'Actinidia07693' => 'ach', 'Actinidia08413' => 'ach', 'Actinidia08414' => 'ach', 'Actinidia15289' => 'ach', 'Actinidia19871' => 'ach', 'Actinidia21475' => 'ach', 'Actinidia22576' => 'ach', 'Actinidia28327' => 'ach', 'Actinidia32491' => 'ach', 'Actinidia39463' => 'ach', 'Actinidia39571' => 'ach', 'Ah.01g013750' => 'amhyb', 'Ah.01g023210' => 'amhyb', 'Ah.04g164850' => 'amhyb', 'Ah.05g178060' => 'amhyb', 'Ah.07g204270' => 'amhyb', 'Ah.07g208480' => 'amhyb', 'Ah.09g237410' => 'amhyb', 'Ah.14g089460' => 'amhyb', 'AL1G41790' => 'aly', 'AL1G49050' => 'aly', 'AL1G53810' => 'aly', 'AL1G61400' => 'aly', 'AL4G18580' => 'aly', 'AL5G12510' => 'aly', 'AL5G12540' => 'aly', 'AL6G43230' => 'aly', 'AL7G10370' => 'aly', 'AL7G19250' => 'aly', 'AL8G12240' => 'aly', 'AL8G18540' => 'aly', 'Aqoxy1G02409' => 'aox', 'Aqoxy2G03993' => 'aox', 'Aqoxy3G03357' => 'aox', 'Aqoxy4G00785' => 'aox', 'Aqoxy5G02598' => 'aox', 'Aqoxy6G00132' => 'aox', 'Aqoxy7G01776' => 'aox', 'Aqoxy7G02316' => 'aox', 'Aqoxy7G03973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.12AFKW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B8730' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27IQR1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3F75VG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3RE0GA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41TCQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.527VTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FIR39' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5W8UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DA38EV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ63HS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H1I32C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HC27T5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4M8AP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7N3CZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9UVDZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LS1NQA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT1D4B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SKC4TM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCFV76' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF9Q1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQWD9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1ZM88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WE07RT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YCK7VH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJE6Q6' => 'arhy', 'AT1G28240' => 'ath', 'AT1G34550' => 'ath', 'AT1G53040' => 'ath', 'AT2G02910' => 'ath', 'AT4G09630' => 'ath', 'AT4G38500' => 'ath', 'AT5G42660' => 'ath', 'AT5G46220' => 'ath', 'ATR0152G026' => 'atr', 'ATR0564G343' => 'atr', 'ATR0706G151' => 'atr', 'ATR0733G207' => 'atr', 'ATR0751G234' => 'atr', 'ATR0807G048' => 'atr', 'ATR1091G084' => 'atr', 'Atru.chr10.1229' => 'acertr', 'Atru.chr10.1230' => 'acertr', 'Atru.chr10.1874' => 'acertr', 'Atru.chr11.1808' => 'acertr', 'Atru.chr13.1795' => 'acertr', 'Atru.chr13.570' => 'acertr', 'Atru.chr2.2608' => 'acertr', 'Atru.chr2.2609' => 'acertr', 'Atru.chr5.3428' => 'acertr', 'Atru.chr8.1171' => 'acertr', 'AUR62004651' => 'cqu', 'AUR62008675' => 'cqu', 'AUR62010014' => 'cqu', 'AUR62013004' => 'cqu', 'AUR62014825' => 'cqu', 'AUR62015015' => 'cqu', 'AUR62015151' => 'cqu', 'AUR62017020' => 'cqu', 'AUR62019422' => 'cqu', 'AUR62023570' => 'cqu', 'AUR62025571' => 'cqu', 'AUR62029098' => 'cqu', 'AUR62033863' => 'cqu', 'AUR62034296' => 'cqu', 'AUR62040075' => 'cqu', 'BcaB02g07334' => 'bca', 'BcaB02g10575' => 'bca', 'BcaB03g12119' => 'bca', 'BcaB03g12120' => 'bca', 'BcaB03g13945' => 'bca', 'BcaB04g17123' => 'bca', 'BcaB04g17867' => 'bca', 'BcaB04g19839' => 'bca', 'BcaB07g30317' => 'bca', 'BcaB07g32432' => 'bca', 'BcaB07g33362' => 'bca', 'BcaB08g36611' => 'bca', 'BcaC01g00028' => 'bca', 'BcaC01g01356' => 'bca', 'BcaC01g02034' => 'bca', 'BcaC01g06051' => 'bca', 'BcaC03g16839' => 'bca', 'BcaC03g17176' => 'bca', 'BcaC05g26829' => 'bca', 'BcaC06g31490' => 'bca', 'BcaC06g35344' => 'bca', 'BcaC06g36570' => 'bca', 'BcaC07g37537' => 'bca', 'BcaC08g43491' => 'bca', 'BcaC08g43773' => 'bca', 'BcaNung00234' => 'bca', 'BcaNung01982' => 'bca', 'BcaNung03707' => 'bca', 'BcaNung06454' => 'bca', 'BolC2t10762H' => 'bol', 'BolC2t11191H' => 'bol', 'BolC3t14322H' => 'bol', 'BolC3t19747H' => 'bol', 'BolC3t21425H' => 'bol', 'BolC4t27800H' => 'bol', 'BolC5t31423H' => 'bol', 'BolC6t35951H' => 'bol', 'BolC6t36282H' => 'bol', 'BolC7t40678H' => 'bol', 'BolC7t40679H' => 'bol', 'BolC7t42222H' => 'bol', 'BolC7t43492H' => 'bol', 'BolC7t46785H' => 'bol', 'BolC8t47853H' => 'bol', 'BolC9t56805H' => 'bol', 'BraA02t08000Z' => 'bra', 'BraA02t08341Z' => 'bra', 'BraA03t10936Z' => 'bra', 'BraA03t15657Z' => 'bra', 'BraA04t18100Z' => 'bra', 'BraA05t20523Z' => 'bra', 'BraA06t23353Z' => 'bra', 'BraA06t27473Z' => 'bra', 'BraA06t27769Z' => 'bra', 'BraA07t28928Z' => 'bra', 'BraA08t32236Z' => 'bra', 'BraA08t32841Z' => 'bra', 'BraA08t34524Z' => 'bra', 'BraA09t38742Z' => 'bra', 'BraA09t39295Z' => 'bra', 'C02p47180' => 'bna', 'C02p50990' => 'bna', 'C03p19360' => 'bna', 'C03p74950' => 'bna', 'C03p91000' => 'bna', 'C04p63260' => 'bna', 'C05p27050' => 'bna', 'C06p08750' => 'bna', 'C06p11490' => 'bna', 'C07p02820' => 'bna', 'C07p17180' => 'bna', 'C07p29440' => 'bna', 'C07p63730' => 'bna', 'C09p39260' => 'bna', 'CAN.G1164.34' => 'can', 'CAN.G1164.39' => 'can', 'CAN.G1530.3' => 'can', 'CAN.G162.61' => 'can', 'CAN.G176.6' => 'can', 'CAN.G289.49' => 'can', 'CAN.G370.21' => 'can', 'CAN.G370.22' => 'can', 'CAN.G371.117' => 'can', 'CAN.G58.37' => 'can', 'CAN.G588.98' => 'can', 'CANSAT21G2266' => 'cansat', 'CANSAT25G2799' => 'cansat', 'CANSAT35G0862' => 'cansat', 'CANSAT35G1704' => 'cansat', 'CANSAT35G1760' => 'cansat', 'CANSAT56G3971' => 'cansat', 'CANSAT56G4116' => 'cansat', 'CANSAT80G1259' => 'cansat', 'CARHR027730' => 'chi', 'CARHR033880' => 'chi', 'CARHR043270' => 'chi', 'CARHR145330' => 'chi', 'CARHR145340' => 'chi', 'CARHR175570' => 'chi', 'CARHR181570' => 'chi', 'CARHR258470' => 'chi', 'CARHR260490' => 'chi', 'CARHR294220' => 'chi', 'Carub.0001s2668' => 'cru', 'Carub.0001s3257' => 'cru', 'Carub.0001s4220' => 'cru', 'Carub.0005s0179' => 'cru', 'Carub.0006s2807' => 'cru', 'Carub.0007s0039' => 'cru', 'Carub.0008s0169' => 'cru', 'Carub.0008s0636' => 'cru', 'Ca_00338_v3' => 'car', 'Ca_00542_v3' => 'car', 'Ca_01844_v3' => 'car', 'Ca_10611_v3' => 'car', 'Ca_13326_v3' => 'car', 'Ca_17944_v3' => 'car', 'Ca_18546_v3' => 'car', 'Ca_24219_v3' => 'car', 'Ca_29972_v3' => 'car', 'CBR_g3681' => 'cbr', 'CBR_g40021' => 'cbr', 'Cc01_g08140' => 'ccan', 'Cc02_g13410' => 'ccan', 'Cc02_g37480' => 'ccan', 'Cc05_g12030' => 'ccan', 'Cc09_g03370' => 'ccan', 'Cc09_g10300' => 'ccan', 'Cc10_g03530' => 'ccan', 'Cc10_g11380' => 'ccan', 'CDE01G0176' => 'cde', 'CDE02G0675' => 'cde', 'CDE02G0942' => 'cde', 'CDE02G1153' => 'cde', 'CDE02G4177' => 'cde', 'CDE04G2117' => 'cde', 'CDE04G2736' => 'cde', 'CDE08G1161' => 'cde', 'CDE09G1238' => 'cde', 'Cfa000467' => 'cfa', 'Cfa000947' => 'cfa', 'Cfa004969' => 'cfa', 'Cfa005284' => 'cfa', 'Cfa008993' => 'cfa', 'Cfa018187' => 'cfa', 'Cfa018454' => 'cfa', 'Cfa020585' => 'cfa', 'Ciclev10000424m.g' => 'ccl', 'Ciclev10003605m.g' => 'ccl', 'Ciclev10007828m.g' => 'ccl', 'Ciclev10014620m.g' => 'ccl', 'Ciclev10015169m.g' => 'ccl', 'Ciclev10018291m.g' => 'ccl', 'Ciclev10028256m.g' => 'ccl', 'Ciclev10033822m.g' => 'ccl', 'CiPaw.05G060300' => 'cil', 'CiPaw.05G085000' => 'cil', 'CiPaw.06G083700' => 'cil', 'CiPaw.06G120300' => 'cil', 'CiPaw.09G060500' => 'cil', 'CiPaw.09G123800' => 'cil', 'CiPaw.11G169700' => 'cil', 'CiPaw.12G118300' => 'cil', 'CiPaw.15G071000' => 'cil', 'CiPaw.15G081900' => 'cil', 'ClCG01G024610' => 'cla', 'ClCG03G006070' => 'cla', 'ClCG05G019250' => 'cla', 'ClCG09G009500' => 'cla', 'ClCG11G008200' => 'cla', 'ClCG11G018080' => 'cla', 'COL.COLO4_17373' => 'col', 'COL.COLO4_22994' => 'col', 'COL.COLO4_26389' => 'col', 'COL.COLO4_27170' => 'col', 'COL.COLO4_31074' => 'col', 'COL.COLO4_31465' => 'col', 'COL.COLO4_36438' => 'col', 'COL.COLO4_36439' => 'col', 'Cpa.g.c38781' => 'cpa', 'Cpa.g.sc128.12' => 'cpa', 'Cpa.g.sc166.7' => 'cpa', 'Cpa.g.sc166.8' => 'cpa', 'Cpa.g.sc20.111' => 'cpa', 'Cpa.g.sc27.31' => 'cpa', 'Cpa.g.sc64.36' => 'cpa', 'Cpa.g.sc64.37' => 'cpa', 'Cpa.g.sc66.49' => 'cpa', 'Cpa.g.sc80.64' => 'cpa', 'CsaV3_1G012320' => 'csa', 'CsaV3_2G008480' => 'csa', 'CsaV3_2G033450' => 'csa', 'CsaV3_3G044830' => 'csa', 'CsaV3_4G033710' => 'csa', 'CsaV3_6G051730' => 'csa', 'CsaV3_7G025350' => 'csa', 'CSS0001067' => 'camsi', 'CSS0005996' => 'camsi', 'CSS0006590' => 'camsi', 'CSS0009673' => 'camsi', 'CSS0010201' => 'camsi', 'CSS0010549' => 'camsi', 'CSS0011364' => 'camsi', 'CSS0014473' => 'camsi', 'CSS0014961' => 'camsi', 'CSS0020191' => 'camsi', 'CSS0021165' => 'camsi', 'CSS0022306' => 'camsi', 'CSS0030591' => 'camsi', 'CSS0030696' => 'camsi', 'CSS0032653' => 'camsi', 'CSS0037487' => 'camsi', 'CSS0041102' => 'camsi', 'CSS0041261' => 'camsi', 'CSS0046246' => 'camsi', 'CSS0049256' => 'camsi', 'DCAR_004075' => 'dca', 'DCAR_011538' => 'dca', 'DCAR_019553' => 'dca', 'DCAR_020952' => 'dca', 'DCAR_021739' => 'dca', 'DCAR_027407' => 'dca', 'DCAR_027913' => 'dca', 'DCAR_028066' => 'dca', 'Dinv05899' => 'din', 'Dinv07563' => 'din', 'Dinv08010' => 'din', 'Dinv14125' => 'din', 'Dinv20172' => 'din', 'Dinv30743' => 'din', 'Dinv31229' => 'din', 'Dinv34162' => 'din', 'Dinv36028' => 'din', 'Dinv39368' => 'din', 'Dinv40565' => 'din', 'Dinv41706' => 'din', 'Duzib052G0089' => 'dzi', 'Duzib116G0641' => 'dzi', 'Duzib132G0069' => 'dzi', 'Duzib132G1219' => 'dzi', 'Duzib147G0278' => 'dzi', 'Duzib160G0480' => 'dzi', 'Duzib170G0661' => 'dzi', 'Duzib177G0591' => 'dzi', 'Duzib187G1353' => 'dzi', 'Duzib192G0858' => 'dzi', 'Duzib192G0883' => 'dzi', 'Duzib213G0506' => 'dzi', 'Duzib235G0289' => 'dzi', 'Duzib251G0422' => 'dzi', 'ECA232G3898' => 'eca', 'ECA233G5950' => 'eca', 'ECA234G1699' => 'eca', 'ECA234G2421' => 'eca', 'ECA236G0426' => 'eca', 'ECA236G4331' => 'eca', 'ECA248G2573' => 'eca', 'EL10Ac1g00077' => 'bvu', 'EL10Ac1g01746' => 'bvu', 'EL10Ac2g03464' => 'bvu', 'EL10Ac4g08176' => 'bvu', 'EL10Ac7g17521' => 'bvu', 'EL10Ac8g20386' => 'bvu', 'EL10Ac9g21343' => 'bvu', 'EL10Ac9g22688' => 'bvu', 'Eucgr.B03434' => 'egr', 'Eucgr.D00618' => 'egr', 'Eucgr.E02395' => 'egr', 'Eucgr.F01129' => 'egr', 'Eucgr.F02622' => 'egr', 'Eucgr.F04207' => 'egr', 'FAN01G0570' => 'fan', 'FAN03G3351' => 'fan', 'FAN06G3702' => 'fan', 'FAN07G2149' => 'fan', 'FAN10G3758' => 'fan', 'FAN11G1170' => 'fan', 'FAN11G2050' => 'fan', 'FAN11G2724' => 'fan', 'FAN12G1700' => 'fan', 'FAN12G2028' => 'fan', 'FAN15G1160' => 'fan', 'FAN15G3063' => 'fan', 'FAN16G2540' => 'fan', 'FAN16G3077' => 'fan', 'FAN16G3624' => 'fan', 'FAN17G0221' => 'fan', 'FAN20G2492' => 'fan', 'FAN20G2905' => 'fan', 'FAN21G0548' => 'fan', 'FAN21G1300' => 'fan', 'FAN22G0077' => 'fan', 'FAN22G1315' => 'fan', 'FAN24G1280' => 'fan', 'FAN24G1445' => 'fan', 'FAN24G3527' => 'fan', 'FAN25G0464' => 'fan', 'FAN25G2885' => 'fan', 'FAN25G3270' => 'fan', 'FAN27G1101' => 'fan', 'FAN27G2846' => 'fan', 'FAN27G3524' => 'fan', 'FvH4_2g11770' => 'fve', 'FvH4_2g15630' => 'fve', 'FvH4_3g05570' => 'fve', 'FvH4_3g09110' => 'fve', 'FvH4_3g19940' => 'fve', 'FvH4_4g04821' => 'fve', 'FvH4_4g31480' => 'fve', 'FvH4_7g01740' => 'fve', 'Glyma.05G130400' => 'gma', 'Glyma.05G156400' => 'gma', 'Glyma.07G197000' => 'gma', 'Glyma.08G085151' => 'gma', 'Glyma.08G114500' => 'gma', 'Glyma.08G300400' => 'gma', 'Glyma.10G215800' => 'gma', 'Glyma.12G224400' => 'gma', 'Glyma.13G179300' => 'gma', 'Glyma.13G218151' => 'gma', 'Glyma.13G238800' => 'gma', 'Glyma.13G276900' => 'gma', 'Glyma.14G078200' => 'gma', 'Glyma.15G074500' => 'gma', 'Glyma.15G094100' => 'gma', 'Glyma.17G247200' => 'gma', 'Glyma.18G120100' => 'gma', 'Glyma.20G176000' => 'gma', 'Gohir.A01G063600' => 'ghi', 'Gohir.A01G170301' => 'ghi', 'Gohir.A02G060500' => 'ghi', 'Gohir.A05G133850' => 'ghi', 'Gohir.A05G161400' => 'ghi', 'Gohir.A06G012900' => 'ghi', 'Gohir.A06G035901' => 'ghi', 'Gohir.A06G127100' => 'ghi', 'Gohir.A06G210500' => 'ghi', 'Gohir.A08G008650' => 'ghi', 'Gohir.A09G072700' => 'ghi', 'Gohir.A09G088301' => 'ghi', 'Gohir.A10G040600' => 'ghi', 'Gohir.A12G036300' => 'ghi', 'Gohir.A12G143350' => 'ghi', 'Gohir.A12G165500' => 'ghi', 'Gohir.A13G145700' => 'ghi', 'Gohir.D01G050000' => 'ghi', 'Gohir.D01G051366' => 'ghi', 'Gohir.D01G161350' => 'ghi', 'Gohir.D02G065900' => 'ghi', 'Gohir.D05G164200' => 'ghi', 'Gohir.D05G355500' => 'ghi', 'Gohir.D06G010400' => 'ghi', 'Gohir.D06G111250' => 'ghi', 'Gohir.D06G132000' => 'ghi', 'Gohir.D06G210500' => 'ghi', 'Gohir.D07G165675' => 'ghi', 'Gohir.D08G062240' => 'ghi', 'Gohir.D08G086101' => 'ghi', 'Gohir.D08G138060' => 'ghi', 'Gohir.D09G072300' => 'ghi', 'Gohir.D10G041400' => 'ghi', 'Gohir.D11G191020' => 'ghi', 'Gohir.D11G212066' => 'ghi', 'Gohir.D12G036300' => 'ghi', 'Gohir.D12G168600' => 'ghi', 'Gohir.D13G150600' => 'ghi', 'Gorai.001G057300' => 'gra', 'Gorai.002G069900' => 'gra', 'Gorai.002G200000' => 'gra', 'Gorai.003G067600' => 'gra', 'Gorai.005G074800' => 'gra', 'Gorai.006G087300' => 'gra', 'Gorai.008G037500' => 'gra', 'Gorai.008G181400' => 'gra', 'Gorai.009G169400' => 'gra', 'Gorai.009G387900' => 'gra', 'Gorai.010G013300' => 'gra', 'Gorai.010G153800' => 'gra', 'Gorai.010G255800' => 'gra', 'Gorai.011G043700' => 'gra', 'Gorai.011G198900' => 'gra', 'Gorai.013G168400' => 'gra', 'GSVIVG01005212001' => 'vvi', 'GSVIVG01006163001' => 'vvi', 'GSVIVG01009625001' => 'vvi', 'GSVIVG01014338001' => 'vvi', 'GSVIVG01020005001' => 'vvi', 'GSVIVG01021450001' => 'vvi', 'GSVIVG01023975001' => 'vvi', 'GSVIVG01034490001' => 'vvi', 'HanXRQChr04g0112071' => 'han', 'HanXRQChr05g0131151' => 'han', 'HanXRQChr09g0262371' => 'han', 'HanXRQChr09g0268401' => 'han', 'HanXRQChr10g0279241' => 'han', 'HanXRQChr10g0297961' => 'han', 'HanXRQChr11g0326231' => 'han', 'HanXRQChr11g0328471' => 'han', 'HanXRQChr16g0507941' => 'han', 'HanXRQChr17g0560211' => 'han', 'Haze_02108' => 'cav', 'Haze_02428' => 'cav', 'Haze_05593' => 'cav', 'Haze_06448' => 'cav', 'Haze_09427' => 'cav', 'Haze_12022' => 'cav', 'Haze_17612' => 'cav', 'Haze_17928' => 'cav', 'Hma1.2p1_0032F.1_g019250' => 'hma', 'Hma1.2p1_0163F.1_g072690' => 'hma', 'Hma1.2p1_0265F.1_g106710' => 'hma', 'Hma1.2p1_0286F.1_g113970' => 'hma', 'Hma1.2p1_0363F.1_g136640' => 'hma', 'Hma1.2p1_0584F.1_g183470' => 'hma', 'Hma1.2p1_0885F.1_g232570' => 'hma', 'HPP92_006022' => 'vpl', 'HPP92_007320' => 'vpl', 'HPP92_011521' => 'vpl', 'HPP92_019387' => 'vpl', 'HPP92_024038' => 'vpl', 'Hund05891' => 'sun', 'Hund06450' => 'sun', 'Hund12053' => 'sun', 'Hund16800' => 'sun', 'Hund21222' => 'sun', 'Hund22896' => 'sun', 'Hund23746' => 'sun', 'Hund27083' => 'sun', 'Lalb_Chr02g0141831' => 'lal', 'Lalb_Chr02g0141841' => 'lal', 'Lalb_Chr05g0220411' => 'lal', 'Lalb_Chr06g0162081' => 'lal', 'Lalb_Chr09g0327651' => 'lal', 'Lalb_Chr13g0295051' => 'lal', 'Lalb_Chr15g0086801' => 'lal', 'Lalb_Chr16g0383781' => 'lal', 'Lalb_Chr16g0383791' => 'lal', 'Lalb_Chr18g0055441' => 'lal', 'Lalb_Chr18g0059611' => 'lal', 'Lalb_Chr20g0109661' => 'lal', 'Lalb_Chr20g0109831' => 'lal', 'Lalb_Chr20g0121871' => 'lal', 'Lalb_Chr22g0355361' => 'lal', 'Lalb_Chr25g0286371' => 'lal', 'Lj1A1187G43' => 'lonja', 'Lj1A1205T50' => 'lonja', 'Lj1A800G33' => 'lonja', 'Lj1C1187T7' => 'lonja', 'Lj1C843T11' => 'lonja', 'Lj1g0010940' => 'lja', 'Lj2A288T69' => 'lonja', 'Lj3g0024276' => 'lja', 'Lj4A47T76' => 'lonja', 'Lj4g0005805' => 'lja', 'Lj4g0006097' => 'lja', 'Lj4g0008528' => 'lja', 'Lj4g0024907' => 'lja', 'Lj5g0012472' => 'lja', 'Lj5g0018648' => 'lja', 'Lj6C789G1' => 'lonja', 'Lj6g0004000' => 'lja', 'Lj7A292G67' => 'lonja', 'Lj7A292T64' => 'lonja', 'Lj9A400T58' => 'lonja', 'Lsat_1_v5_gn_1_126181' => 'lsa', 'Lsat_1_v5_gn_4_123041' => 'lsa', 'Lsat_1_v5_gn_4_133620' => 'lsa', 'Lsat_1_v5_gn_4_53221' => 'lsa', 'Lsat_1_v5_gn_4_71961' => 'lsa', 'Lsat_1_v5_gn_7_105241' => 'lsa', 'Lsat_1_v5_gn_7_21361' => 'lsa', 'Lsat_1_v5_gn_7_28860' => 'lsa', 'Lsat_1_v5_gn_7_31260' => 'lsa', 'Lsat_1_v5_gn_8_52801' => 'lsa', 'Manes.02G191400' => 'mes', 'Manes.03G110100' => 'mes', 'Manes.04G071100' => 'mes', 'Manes.05G100500' => 'mes', 'Manes.05G164700' => 'mes', 'Manes.15G087000' => 'mes', 'Manes.15G121500' => 'mes', 'Manes.16G028300' => 'mes', 'Manes.17G046100' => 'mes', 'Manes.17G069800' => 'mes', 'Manes.18G100500' => 'mes', 'Mapoly0002s0109' => 'mpo', 'Mapoly0024s0007' => 'mpo', 'Mapoly0089s0032' => 'mpo', 'MBI04_g42241_MAGBIO' => 'mbi', 'MBI05_g11988_MAGBIO' => 'mbi', 'MBI05_g35452_MAGBIO' => 'mbi', 'MBI07_g30179_MAGBIO' => 'mbi', 'MBI07_g35859_MAGBIO' => 'mbi', 'MBI07_g35860_MAGBIO' => 'mbi', 'MBI07_g37166_MAGBIO' => 'mbi', 'MBI08_g18172_MAGBIO' => 'mbi', 'MBI09_g08441_MAGBIO' => 'mbi', 'MBI13_g01676_MAGBIO' => 'mbi', 'MBI14_g42955_MAGBIO' => 'mbi', 'MBI16_g13161_MAGBIO' => 'mbi', 'MBI17_g27204_MAGBIO' => 'mbi', 'MBI19_g21595_MAGBIO' => 'mbi', 'MD00G1148400' => 'mdo', 'MD02G1301200' => 'mdo', 'MD03G1227800' => 'mdo', 'MD05G1041100' => 'mdo', 'MD05G1124800' => 'mdo', 'MD05G1284000' => 'mdo', 'MD05G1338800' => 'mdo', 'MD05G1338900' => 'mdo', 'MD07G1022800' => 'mdo', 'MD10G1047500' => 'mdo', 'MD10G1127500' => 'mdo', 'MD10G1262300' => 'mdo', 'MD10G1293800' => 'mdo', 'MD16G1074300' => 'mdo', 'Medtr1g021670' => 'mtr', 'Medtr1g096320' => 'mtr', 'Medtr2g013690' => 'mtr', 'Medtr2g019450' => 'mtr', 'Medtr2g085170' => 'mtr', 'Medtr4g088785' => 'mtr', 'Medtr8g055930' => 'mtr', 'Medtr8g085850' => 'mtr', 'MELO3C002605.2' => 'cme', 'MELO3C003891.2' => 'cme', 'MELO3C004012.2' => 'cme', 'MELO3C007134.2' => 'cme', 'MELO3C008118.2' => 'cme', 'MELO3C016700.2' => 'cme', 'MELO3C024127.2' => 'cme', 'MELO3C033361.2' => 'cme', 'MELO3C033362.2' => 'cme', 'Migut.C00430' => 'egut', 'Migut.C01246' => 'egut', 'Migut.E00101' => 'egut', 'Migut.H01486' => 'egut', 'Migut.H01939' => 'egut', 'Migut.K00360' => 'egut', 'Migut.M00910' => 'egut', 'Migut.M01139' => 'egut', 'Migut.N02677' => 'egut', 'MSTRG.13252' => 'ama', 'MSTRG.14701' => 'ama', 'MSTRG.1521' => 'ama', 'MSTRG.15884' => 'ama', 'MSTRG.16242' => 'ama', 'MSTRG.22285' => 'ama', 'MSTRG.22444' => 'ama', 'MSTRG.2349' => 'ama', 'MSTRG.26308' => 'ama', 'MSTRG.28296' => 'ama', 'MSTRG.9895' => 'ama', 'Nitab4.5_0000110g0060' => 'nta', 'Nitab4.5_0000420g0130' => 'nta', 'Nitab4.5_0000422g0030' => 'nta', 'Nitab4.5_0000560g0180' => 'nta', 'Nitab4.5_0000703g0100' => 'nta', 'Nitab4.5_0000786g0200' => 'nta', 'Nitab4.5_0001336g0020' => 'nta', 'Nitab4.5_0001796g0030' => 'nta', 'Nitab4.5_0003348g0060' => 'nta', 'Nitab4.5_0003698g0040' => 'nta', 'Nitab4.5_0003942g0090' => 'nta', 'Nitab4.5_0004775g0070' => 'nta', 'Nitab4.5_0004864g0030' => 'nta', 'Nitab4.5_0005615g0020' => 'nta', 'Nitab4.5_0009288g0030' => 'nta', 'Nitab4.5_0009341g0010' => 'nta', 'Nitab4.5_0009535g0010' => 'nta', 'Nn1g03995' => 'nnu', 'Nn1g04100' => 'nnu', 'Nn1g06530' => 'nnu', 'Nn3g16404' => 'nnu', 'Nn3g17212' => 'nnu', 'Nn3g20776' => 'nnu', 'Nn3g21923' => 'nnu', 'Nn5g27737' => 'nnu', 'Nn5g29461' => 'nnu', 'Nn7g38355' => 'nnu', 'Nn8g39873' => 'nnu', 'Oeu000548.2' => 'oeu', 'Oeu004672.1' => 'oeu', 'Oeu015605.2' => 'oeu', 'Oeu016092.1' => 'oeu', 'Oeu017879.3' => 'oeu', 'Oeu024910.1' => 'oeu', 'Oeu028965.1' => 'oeu', 'Oeu031269.1' => 'oeu', 'Oeu031270.1' => 'oeu', 'Oeu032535.1' => 'oeu', 'Oeu034151.1' => 'oeu', 'Oeu034152.1' => 'oeu', 'Oeu034588.2' => 'oeu', 'Oeu050846.1' => 'oeu', 'Oeu050849.2' => 'oeu', 'Oeu051063.2' => 'oeu', 'Oeu052368.1' => 'oeu', 'Oeu052370.1' => 'oeu', 'Os01g0210400' => 'osa', 'Os01g0304300' => 'osa', 'Os01g0749100' => 'osa', 'Os02g0745800' => 'osa', 'Os03g0769050' => 'osa', 'Os05g0531500' => 'osa', 'Os06g0724300' => 'osa', 'Os11g0198100' => 'osa', 'Peaxi162Scf00069g01425' => 'pax', 'Peaxi162Scf00280g00811' => 'pax', 'Peaxi162Scf00310g00615' => 'pax', 'Peaxi162Scf00362g00542' => 'pax', 'Peaxi162Scf00461g00310' => 'pax', 'Peaxi162Scf00530g00118' => 'pax', 'Peaxi162Scf00541g00057' => 'pax', 'Peaxi162Scf00661g00017' => 'pax', 'Peaxi162Scf00926g00027' => 'pax', 'Peaxi162Scf01064g00263' => 'pax', 'Peaxi162Scf01211g00135' => 'pax', 'PGR004G2336' => 'pgr', 'PGR042G0327' => 'pgr', 'PGR042G1957' => 'pgr', 'PGR042G2003' => 'pgr', 'PGR042G3929' => 'pgr', 'PGR083G1137' => 'pgr', 'PGR083G1364' => 'pgr', 'PGSC0003DMG400003381' => 'stu', 'PGSC0003DMG400003417' => 'stu', 'PGSC0003DMG400008981' => 'stu', 'PGSC0003DMG400012417' => 'stu', 'PGSC0003DMG400012823' => 'stu', 'PGSC0003DMG400016885' => 'stu', 'PGSC0003DMG400022812' => 'stu', 'PGSC0003DMG400029726' => 'stu', 'PGSC0003DMG401009243' => 'stu', 'PGSC0003DMG401031505' => 'stu', 'PGSC0003DMG402031505' => 'stu', 'Phvul.001G017600' => 'pvu', 'Phvul.002G193500' => 'pvu', 'Phvul.002G228900' => 'pvu', 'Phvul.002G236800' => 'pvu', 'Phvul.003G049500' => 'pvu', 'Phvul.005G072000' => 'pvu', 'Phvul.006G164800' => 'pvu', 'Phvul.006G185100' => 'pvu', 'Phvul.007G090000' => 'pvu', 'Potri.001G399800' => 'ptr', 'Potri.002G149900' => 'ptr', 'Potri.004G044100' => 'ptr', 'Potri.004G177600' => 'ptr', 'Potri.009G138000' => 'ptr', 'Potri.010G094000' => 'ptr', 'Potri.011G053000' => 'ptr', 'Potri.011G119300' => 'ptr', 'Potri.013G113700' => 'ptr', 'Potri.018G107800' => 'ptr', 'Potri.019G084100' => 'ptr', 'Pp3c14_23720' => 'ppa', 'Pp3c16_6340' => 'ppa', 'Pp3c23_13420' => 'ppa', 'Pp3c24_2740' => 'ppa', 'Pp3c25_860' => 'ppa', 'Pp3c8_21750' => 'ppa', 'Prupe.1G273000' => 'ppe', 'Prupe.1G273700' => 'ppe', 'Prupe.1G274100' => 'ppe', 'Prupe.2G023300' => 'ppe', 'Prupe.4G048000' => 'ppe', 'Prupe.4G080400' => 'ppe', 'Prupe.4G181200' => 'ppe', 'Prupe.8G056900' => 'ppe', 'Prupe.8G168700' => 'ppe', 'Psat1g189080' => 'psa', 'Psat1g204760' => 'psa', 'Psat4g175560' => 'psa', 'Psat4g177720' => 'psa', 'Psat5g244240' => 'psa', 'Psat6g010720' => 'psa', 'Psat6g187200' => 'psa', 'Psat7g072040' => 'psa', 'PSO017G3501' => 'pso', 'PSO063G2148' => 'pso', 'PSO063G5608' => 'pso', 'PSO210G6392' => 'pso', 'PSO541G2319' => 'pso', 'PSO541G2836' => 'pso', 'PSO541G4012' => 'pso', 'PSO541G6253' => 'pso', 'PSO675G0580' => 'pso', 'PSO675G0856' => 'pso', 'PSO675G5635' => 'pso', 'PSO675G9157' => 'pso', 'PSO832G1660' => 'pso', 'PSO832G1969' => 'pso', 'QL02p007186' => 'qlo', 'QL02p033904' => 'qlo', 'QL03p064391' => 'qlo', 'QL05p040593' => 'qlo', 'QL05p058242' => 'qlo', 'QL08p021825' => 'qlo', 'QL11p004981' => 'qlo', 'RcHm_v2.0_Chr1g0318301' => 'rch', 'RcHm_v2.0_Chr4g0418501' => 'rch', 'RcHm_v2.0_Chr4g0439971' => 'rch', 'RcHm_v2.0_Chr5g0008541' => 'rch', 'RcHm_v2.0_Chr5g0014101' => 'rch', 'RcHm_v2.0_Chr5g0014131' => 'rch', 'RcHm_v2.0_Chr5g0033621' => 'rch', 'RcHm_v2.0_Chr6g0272041' => 'rch', 'RcHm_v2.0_Chr6g0278831' => 'rch', 'Rhsim02G0130400' => 'rsi', 'Rhsim02G0171100' => 'rsi', 'Rhsim05G0053000' => 'rsi', 'Rhsim05G0053100' => 'rsi', 'Rhsim06G0096500' => 'rsi', 'Rhsim06G0096600' => 'rsi', 'Rhsim06G0199100' => 'rsi', 'Rhsim12G0062300' => 'rsi', 'Rhsim12G0062800' => 'rsi', 'Sabra02G0118600' => 'sbr', 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'Solyc03g079860.2' => 'sly', 'Solyc04g079770.3' => 'sly', 'Solyc05g007430.4' => 'sly', 'Solyc07g063150.3' => 'sly', 'Solyc08g016620.3' => 'sly', 'Solyc09g057590.3' => 'sly', 'Solyc09g057600.1' => 'sly', 'Solyc10g009050.3' => 'sly', 'Solyc11g017420.2' => 'sly', 'Sopen01g053810' => 'spe', 'Sopen02g023040' => 'spe', 'Sopen03g002440' => 'spe', 'Sopen04g033350' => 'spe', 'Sopen05g003310' => 'spe', 'Sopen07g004050' => 'spe', 'Sopen07g031340' => 'spe', 'Sopen08g006990' => 'spe', 'Sopen10g004830' => 'spe', 'Sopen11g009370' => 'spe', 'Sp1g24450' => 'spa', 'Sp1g29670' => 'spa', 'Sp1g39600' => 'spa', 'Sp2g11080' => 'spa', 'Sp2g13970' => 'spa', 'Sp4g16130' => 'spa', 'Sp6g13080' => 'spa', 'Sp7g37270' => 'spa', 'TAR371G0065' => 'tar', 'TAR376G0340' => 'tar', 'TAR376G0435' => 'tar', 'TAR381G0002' => 'tar', 'TAR381G1236' => 'tar', 'TAR624G0055' => 'tar', 'TAR624G0324' => 'tar', 'TAR624G0696' => 'tar', 'TAR624G0906' => 'tar', 'TAR625G0107' => 'tar', 'TAR626G0015' => 'tar', 'TAR626G1356' => 'tar', 'TAR627G0888' => 'tar', 'TAR628G0399' => 'tar', 'TAR628G1327' => 'tar', 'TAR629G2831' => 'tar', 'TAR629G2874' => 'tar', 'TAR633G1432' => 'tar', 'TAR633G2771' => 'tar', 'THA.LOC104803394' => 'tha', 'THA.LOC104805153' => 'tha', 'THA.LOC104806784' => 'tha', 'THA.LOC104810473' => 'tha', 'THA.LOC104813100' => 'tha', 'THA.LOC104814215' => 'tha', 'THA.LOC104815554' => 'tha', 'THA.LOC104820544' => 'tha', 'THA.LOC104824754' => 'tha', 'THA.LOC104827717' => 'tha', 'Thecc.02G031400' => 'tca', 'Thecc.02G055900' => 'tca', 'Thecc.02G350800' => 'tca', 'Thecc.06G150900' => 'tca', 'Thecc.06G186600' => 'tca', 'Thecc.07G089600' => 'tca', 'Thecc.08G020400' => 'tca', 'Thecc.08G182100' => 'tca', 'Thhalv10000873m.g' => 'esa', 'Thhalv10004185m.g' => 'esa', 'Thhalv10006981m.g' => 'esa', 'Thhalv10007204m.g' => 'esa', 'Thhalv10011374m.g' => 'esa', 'Thhalv10013482m.g' => 'esa', 'Thhalv10017801m.g' => 'esa', 'Thhalv10024983m.g' => 'esa', 'TPR.G12072' => 'tpr', 'TPR.G15769' => 'tpr', 'TPR.G16504' => 'tpr', 'TPR.G16506' => 'tpr', 'TPR.G24345' => 'tpr', 'TPR.G26666' => 'tpr', 'TPR.G27320' => 'tpr', 'TPR.G31819' => 'tpr', 'TPR.G38879' => 'tpr', 'TPR.G39015' => 'tpr', 'TPR.G8819' => 'tpr', 'TWI09G0924' => 'twi', 'TWI12G0811' => 'twi', 'TWI12G1294' => 'twi', 'TWI31G0150' => 'twi', 'TWI36G1262' => 'twi', 'TWI38G1287' => 'twi', 'TWI38G1633' => 'twi', 'TWI38G1982' => 'twi', 'TWI39G0116' => 'twi', 'TWI60G1011' => 'twi', 'TWI63G0171' => 'twi', 'TWI73G0839' => 'twi', 'TWI79G1511' => 'twi', 'unitig_0.g915' => 'ugi', 'unitig_0.g916' => 'ugi', 'unitig_21.g20219' => 'ugi', 'unitig_21.g20416' => 'ugi', 'unitig_578.g16132' => 'ugi', 'unitig_578.g16718' => 'ugi', 'unitig_62.g23481' => 'ugi', 'unitig_744.g24535' => 'ugi', 'unitig_749.g13525' => 'ugi', 'vmacro01248' => 'vma', 'vmacro02290' => 'vma', 'vmacro10946' => 'vma', 'vmacro11865' => 'vma', 'vmacro12493' => 'vma', 'vmacro17322' => 'vma', 'vmacro21599' => 'vma', 'vmacro23041' => 'vma', 'VMungo0251G0004' => 'vmu', 'VMungo0251G2639' => 'vmu', 'VMungo0251G2967' => 'vmu', 'VMungo0540G0864' => 'vmu', 'VMungo0540G1569' => 'vmu', 'VMungo0647G0317' => 'vmu', 'VMungo0720G1373' => 'vmu', 'VMungo0720G1508' => 'vmu', 'VMungo1080G0485' => 'vmu', 'VMungo1215G3177' => 'vmu', 'Zm00001eb112600' => 'zma', 'Zm00001eb120220' => 'zma', 'Zm00001eb153240' => 'zma', 'Zm00001eb168880' => 'zma', 'Zm00001eb213920' => 'zma', 'Zm00001eb228280' => 'zma', 'Zm00001eb254580' => 'zma', 'Zm00001eb272180' => 'zma', 'Zm00001eb293190' => 'zma', 'Zm00001eb322930' => 'zma', 'Zm00001eb353360' => 'zma', 'Zm00001eb353390' => 'zma', 'Zm00001eb353430' => 'zma', 'Zm00001eb353440' => 'zma', 'Zm00001eb353780' => 'zma' ), 'gf_id' => 'HOM05D000499', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000499' ), 'data_identifier' => 'HOM05D000499', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000499', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1066', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p29780' => 'bna', 'A02p33180' => 'bna', 'A03p16470' => 'bna', 'A03p66010' => 'bna', 'A04p25970' => 'bna', 'A06p01270' => 'bna', 'A06p46080' => 'bna', 'A07p11400' => 'bna', 'A08p01840' => 'bna', 'A08p08230' => 'bna', 'A08p25740' => 'bna', 'A09p32070' => 'bna', 'A09p37830' => 'bna', 'A09p42840' => 'bna', 'A09p42850' => 'bna', 'Aa31LG10G2060' => 'aar', 'Aa31LG2G7410' => 'aar', 'Aa31LG6G10200' => 'aar', 'Aa31LG6G16680' => 'aar', 'Aa31LG6G8470' => 'aar', 'Aa31LG9G12730' => 'aar', 'Aa31LG9G13680' => 'aar', 'Aa31LG9G14920' => 'aar', 'Aa31LG9G6650' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4977' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5467' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3254' => 'aag', 'Actinidia02578' => 'ach', 'Actinidia07693' => 'ach', 'Actinidia08413' => 'ach', 'Actinidia08414' => 'ach', 'Actinidia15289' => 'ach', 'Actinidia19871' => 'ach', 'Actinidia21475' => 'ach', 'Actinidia22576' => 'ach', 'Actinidia28327' => 'ach', 'Actinidia32491' => 'ach', 'Actinidia39463' => 'ach', 'Actinidia39571' => 'ach', 'Ah.01g013750' => 'amhyb', 'Ah.01g023210' => 'amhyb', 'Ah.04g164850' => 'amhyb', 'Ah.05g178060' => 'amhyb', 'Ah.07g204270' => 'amhyb', 'Ah.07g208480' => 'amhyb', 'Ah.09g237410' => 'amhyb', 'Ah.14g089460' => 'amhyb', 'AL1G41790' => 'aly', 'AL1G49050' => 'aly', 'AL1G53810' => 'aly', 'AL1G61400' => 'aly', 'AL4G18580' => 'aly', 'AL5G12510' => 'aly', 'AL5G12540' => 'aly', 'AL6G43230' => 'aly', 'AL7G10370' => 'aly', 'AL7G19250' => 'aly', 'AL8G12240' => 'aly', 'AL8G18540' => 'aly', 'Aqoxy1G02409' => 'aox', 'Aqoxy2G03993' => 'aox', 'Aqoxy3G03357' => 'aox', 'Aqoxy4G00785' => 'aox', 'Aqoxy5G02598' => 'aox', 'Aqoxy6G00132' => 'aox', 'Aqoxy7G01776' => 'aox', 'Aqoxy7G02316' => 'aox', 'Aqoxy7G03973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.12AFKW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B8730' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27IQR1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3F75VG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3RE0GA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41TCQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.527VTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FIR39' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5W8UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DA38EV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ63HS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H1I32C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HC27T5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4M8AP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7N3CZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9UVDZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LS1NQA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT1D4B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SKC4TM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCFV76' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF9Q1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQWD9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1ZM88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WE07RT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YCK7VH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJE6Q6' => 'arhy', 'AT1G28240' => 'ath', 'AT1G34550' => 'ath', 'AT1G53040' => 'ath', 'AT2G02910' => 'ath', 'AT4G09630' => 'ath', 'AT4G38500' => 'ath', 'AT5G42660' => 'ath', 'AT5G46220' => 'ath', 'ATR0152G026' => 'atr', 'ATR0564G343' => 'atr', 'ATR0706G151' => 'atr', 'ATR0733G207' => 'atr', 'ATR0751G234' => 'atr', 'ATR0807G048' => 'atr', 'ATR1091G084' => 'atr', 'Atru.chr10.1229' => 'acertr', 'Atru.chr10.1230' => 'acertr', 'Atru.chr10.1874' => 'acertr', 'Atru.chr11.1808' => 'acertr', 'Atru.chr13.1795' => 'acertr', 'Atru.chr13.570' => 'acertr', 'Atru.chr2.2608' => 'acertr', 'Atru.chr2.2609' => 'acertr', 'Atru.chr5.3428' => 'acertr', 'Atru.chr8.1171' => 'acertr', 'AUR62004651' => 'cqu', 'AUR62008675' => 'cqu', 'AUR62010014' => 'cqu', 'AUR62013004' => 'cqu', 'AUR62014825' => 'cqu', 'AUR62015015' => 'cqu', 'AUR62015151' => 'cqu', 'AUR62017020' => 'cqu', 'AUR62019422' => 'cqu', 'AUR62023570' => 'cqu', 'AUR62025571' => 'cqu', 'AUR62029098' => 'cqu', 'AUR62033863' => 'cqu', 'AUR62034296' => 'cqu', 'AUR62040075' => 'cqu', 'BcaB02g07334' => 'bca', 'BcaB02g10575' => 'bca', 'BcaB03g12119' => 'bca', 'BcaB03g12120' => 'bca', 'BcaB03g13945' => 'bca', 'BcaB04g17123' => 'bca', 'BcaB04g17867' => 'bca', 'BcaB04g19839' => 'bca', 'BcaB07g30317' => 'bca', 'BcaB07g32432' => 'bca', 'BcaB07g33362' => 'bca', 'BcaB08g36611' => 'bca', 'BcaC01g00028' => 'bca', 'BcaC01g01356' => 'bca', 'BcaC01g02034' => 'bca', 'BcaC01g06051' => 'bca', 'BcaC03g16839' => 'bca', 'BcaC03g17176' => 'bca', 'BcaC05g26829' => 'bca', 'BcaC06g31490' => 'bca', 'BcaC06g35344' => 'bca', 'BcaC06g36570' => 'bca', 'BcaC07g37537' => 'bca', 'BcaC08g43491' => 'bca', 'BcaC08g43773' => 'bca', 'BcaNung00234' => 'bca', 'BcaNung01982' => 'bca', 'BcaNung03707' => 'bca', 'BcaNung06454' => 'bca', 'BolC2t10762H' => 'bol', 'BolC2t11191H' => 'bol', 'BolC3t14322H' => 'bol', 'BolC3t19747H' => 'bol', 'BolC3t21425H' => 'bol', 'BolC4t27800H' => 'bol', 'BolC5t31423H' => 'bol', 'BolC6t35951H' => 'bol', 'BolC6t36282H' => 'bol', 'BolC7t40678H' => 'bol', 'BolC7t40679H' => 'bol', 'BolC7t42222H' => 'bol', 'BolC7t43492H' => 'bol', 'BolC7t46785H' => 'bol', 'BolC8t47853H' => 'bol', 'BolC9t56805H' => 'bol', 'BraA02t08000Z' => 'bra', 'BraA02t08341Z' => 'bra', 'BraA03t10936Z' => 'bra', 'BraA03t15657Z' => 'bra', 'BraA04t18100Z' => 'bra', 'BraA05t20523Z' => 'bra', 'BraA06t23353Z' => 'bra', 'BraA06t27473Z' => 'bra', 'BraA06t27769Z' => 'bra', 'BraA07t28928Z' => 'bra', 'BraA08t32236Z' => 'bra', 'BraA08t32841Z' => 'bra', 'BraA08t34524Z' => 'bra', 'BraA09t38742Z' => 'bra', 'BraA09t39295Z' => 'bra', 'C02p47180' => 'bna', 'C02p50990' => 'bna', 'C03p19360' => 'bna', 'C03p74950' => 'bna', 'C03p91000' => 'bna', 'C04p63260' => 'bna', 'C05p27050' => 'bna', 'C06p08750' => 'bna', 'C06p11490' => 'bna', 'C07p02820' => 'bna', 'C07p17180' => 'bna', 'C07p29440' => 'bna', 'C07p63730' => 'bna', 'C09p39260' => 'bna', 'CAN.G1164.34' => 'can', 'CAN.G1164.39' => 'can', 'CAN.G1530.3' => 'can', 'CAN.G162.61' => 'can', 'CAN.G176.6' => 'can', 'CAN.G289.49' => 'can', 'CAN.G370.21' => 'can', 'CAN.G370.22' => 'can', 'CAN.G371.117' => 'can', 'CAN.G58.37' => 'can', 'CAN.G588.98' => 'can', 'CANSAT21G2266' => 'cansat', 'CANSAT25G2799' => 'cansat', 'CANSAT35G0862' => 'cansat', 'CANSAT35G1704' => 'cansat', 'CANSAT35G1760' => 'cansat', 'CANSAT56G3971' => 'cansat', 'CANSAT56G4116' => 'cansat', 'CANSAT80G1259' => 'cansat', 'CARHR027730' => 'chi', 'CARHR033880' => 'chi', 'CARHR043270' => 'chi', 'CARHR145330' => 'chi', 'CARHR145340' => 'chi', 'CARHR175570' => 'chi', 'CARHR181570' => 'chi', 'CARHR258470' => 'chi', 'CARHR260490' => 'chi', 'CARHR294220' => 'chi', 'Carub.0001s2668' => 'cru', 'Carub.0001s3257' => 'cru', 'Carub.0001s4220' => 'cru', 'Carub.0005s0179' => 'cru', 'Carub.0006s2807' => 'cru', 'Carub.0007s0039' => 'cru', 'Carub.0008s0169' => 'cru', 'Carub.0008s0636' => 'cru', 'Ca_00338_v3' => 'car', 'Ca_00542_v3' => 'car', 'Ca_01844_v3' => 'car', 'Ca_10611_v3' => 'car', 'Ca_13326_v3' => 'car', 'Ca_17944_v3' => 'car', 'Ca_18546_v3' => 'car', 'Ca_24219_v3' => 'car', 'Ca_29972_v3' => 'car', 'CBR_g3681' => 'cbr', 'CBR_g40021' => 'cbr', 'Cc01_g08140' => 'ccan', 'Cc02_g13410' => 'ccan', 'Cc02_g37480' => 'ccan', 'Cc05_g12030' => 'ccan', 'Cc09_g03370' => 'ccan', 'Cc09_g10300' => 'ccan', 'Cc10_g03530' => 'ccan', 'Cc10_g11380' => 'ccan', 'CDE01G0176' => 'cde', 'CDE02G0675' => 'cde', 'CDE02G0942' => 'cde', 'CDE02G1153' => 'cde', 'CDE02G4177' => 'cde', 'CDE04G2117' => 'cde', 'CDE04G2736' => 'cde', 'CDE08G1161' => 'cde', 'CDE09G1238' => 'cde', 'Cfa000467' => 'cfa', 'Cfa000947' => 'cfa', 'Cfa004969' => 'cfa', 'Cfa005284' => 'cfa', 'Cfa008993' => 'cfa', 'Cfa018187' => 'cfa', 'Cfa018454' => 'cfa', 'Cfa020585' => 'cfa', 'Ciclev10000424m.g' => 'ccl', 'Ciclev10003605m.g' => 'ccl', 'Ciclev10007828m.g' => 'ccl', 'Ciclev10014620m.g' => 'ccl', 'Ciclev10015169m.g' => 'ccl', 'Ciclev10018291m.g' => 'ccl', 'Ciclev10028256m.g' => 'ccl', 'Ciclev10033822m.g' => 'ccl', 'CiPaw.05G060300' => 'cil', 'CiPaw.05G085000' => 'cil', 'CiPaw.06G083700' => 'cil', 'CiPaw.06G120300' => 'cil', 'CiPaw.09G060500' => 'cil', 'CiPaw.09G123800' => 'cil', 'CiPaw.11G169700' => 'cil', 'CiPaw.12G118300' => 'cil', 'CiPaw.15G071000' => 'cil', 'CiPaw.15G081900' => 'cil', 'ClCG01G024610' => 'cla', 'ClCG03G006070' => 'cla', 'ClCG05G019250' => 'cla', 'ClCG09G009500' => 'cla', 'ClCG11G008200' => 'cla', 'ClCG11G018080' => 'cla', 'COL.COLO4_17373' => 'col', 'COL.COLO4_22994' => 'col', 'COL.COLO4_26389' => 'col', 'COL.COLO4_27170' => 'col', 'COL.COLO4_31074' => 'col', 'COL.COLO4_31465' => 'col', 'COL.COLO4_36438' => 'col', 'COL.COLO4_36439' => 'col', 'Cpa.g.c38781' => 'cpa', 'Cpa.g.sc128.12' => 'cpa', 'Cpa.g.sc166.7' => 'cpa', 'Cpa.g.sc166.8' => 'cpa', 'Cpa.g.sc20.111' => 'cpa', 'Cpa.g.sc27.31' => 'cpa', 'Cpa.g.sc64.36' => 'cpa', 'Cpa.g.sc64.37' => 'cpa', 'Cpa.g.sc66.49' => 'cpa', 'Cpa.g.sc80.64' => 'cpa', 'CsaV3_1G012320' => 'csa', 'CsaV3_2G008480' => 'csa', 'CsaV3_2G033450' => 'csa', 'CsaV3_3G044830' => 'csa', 'CsaV3_4G033710' => 'csa', 'CsaV3_6G051730' => 'csa', 'CsaV3_7G025350' => 'csa', 'CSS0001067' => 'camsi', 'CSS0005996' => 'camsi', 'CSS0006590' => 'camsi', 'CSS0009673' => 'camsi', 'CSS0010201' => 'camsi', 'CSS0010549' => 'camsi', 'CSS0011364' => 'camsi', 'CSS0014473' => 'camsi', 'CSS0014961' => 'camsi', 'CSS0020191' => 'camsi', 'CSS0021165' => 'camsi', 'CSS0022306' => 'camsi', 'CSS0030591' => 'camsi', 'CSS0030696' => 'camsi', 'CSS0032653' => 'camsi', 'CSS0037487' => 'camsi', 'CSS0041102' => 'camsi', 'CSS0041261' => 'camsi', 'CSS0046246' => 'camsi', 'CSS0049256' => 'camsi', 'DCAR_004075' => 'dca', 'DCAR_011538' => 'dca', 'DCAR_019553' => 'dca', 'DCAR_020952' => 'dca', 'DCAR_021739' => 'dca', 'DCAR_027407' => 'dca', 'DCAR_027913' => 'dca', 'DCAR_028066' => 'dca', 'Dinv05899' => 'din', 'Dinv07563' => 'din', 'Dinv08010' => 'din', 'Dinv14125' => 'din', 'Dinv20172' => 'din', 'Dinv30743' => 'din', 'Dinv31229' => 'din', 'Dinv34162' => 'din', 'Dinv36028' => 'din', 'Dinv39368' => 'din', 'Dinv40565' => 'din', 'Dinv41706' => 'din', 'Duzib052G0089' => 'dzi', 'Duzib116G0641' => 'dzi', 'Duzib132G0069' => 'dzi', 'Duzib132G1219' => 'dzi', 'Duzib147G0278' => 'dzi', 'Duzib160G0480' => 'dzi', 'Duzib170G0661' => 'dzi', 'Duzib177G0591' => 'dzi', 'Duzib187G1353' => 'dzi', 'Duzib192G0858' => 'dzi', 'Duzib192G0883' => 'dzi', 'Duzib213G0506' => 'dzi', 'Duzib235G0289' => 'dzi', 'Duzib251G0422' => 'dzi', 'ECA232G3898' => 'eca', 'ECA233G5950' => 'eca', 'ECA234G1699' => 'eca', 'ECA234G2421' => 'eca', 'ECA236G0426' => 'eca', 'ECA236G4331' => 'eca', 'ECA248G2573' => 'eca', 'EL10Ac1g00077' => 'bvu', 'EL10Ac1g01746' => 'bvu', 'EL10Ac2g03464' => 'bvu', 'EL10Ac4g08176' => 'bvu', 'EL10Ac7g17521' => 'bvu', 'EL10Ac8g20386' => 'bvu', 'EL10Ac9g21343' => 'bvu', 'EL10Ac9g22688' => 'bvu', 'Eucgr.B03434' => 'egr', 'Eucgr.D00618' => 'egr', 'Eucgr.E02395' => 'egr', 'Eucgr.F01129' => 'egr', 'Eucgr.F02622' => 'egr', 'Eucgr.F04207' => 'egr', 'FAN01G0570' => 'fan', 'FAN03G3351' => 'fan', 'FAN06G3702' => 'fan', 'FAN07G2149' => 'fan', 'FAN10G3758' => 'fan', 'FAN11G1170' => 'fan', 'FAN11G2050' => 'fan', 'FAN11G2724' => 'fan', 'FAN12G1700' => 'fan', 'FAN12G2028' => 'fan', 'FAN15G1160' => 'fan', 'FAN15G3063' => 'fan', 'FAN16G2540' => 'fan', 'FAN16G3077' => 'fan', 'FAN16G3624' => 'fan', 'FAN17G0221' => 'fan', 'FAN20G2492' => 'fan', 'FAN20G2905' => 'fan', 'FAN21G0548' => 'fan', 'FAN21G1300' => 'fan', 'FAN22G0077' => 'fan', 'FAN22G1315' => 'fan', 'FAN24G1280' => 'fan', 'FAN24G1445' => 'fan', 'FAN24G3527' => 'fan', 'FAN25G0464' => 'fan', 'FAN25G2885' => 'fan', 'FAN25G3270' => 'fan', 'FAN27G1101' => 'fan', 'FAN27G2846' => 'fan', 'FAN27G3524' => 'fan', 'FvH4_2g11770' => 'fve', 'FvH4_2g15630' => 'fve', 'FvH4_3g05570' => 'fve', 'FvH4_3g09110' => 'fve', 'FvH4_3g19940' => 'fve', 'FvH4_4g04821' => 'fve', 'FvH4_4g31480' => 'fve', 'FvH4_7g01740' => 'fve', 'Glyma.05G130400' => 'gma', 'Glyma.05G156400' => 'gma', 'Glyma.07G197000' => 'gma', 'Glyma.08G085151' => 'gma', 'Glyma.08G114500' => 'gma', 'Glyma.08G300400' => 'gma', 'Glyma.10G215800' => 'gma', 'Glyma.12G224400' => 'gma', 'Glyma.13G179300' => 'gma', 'Glyma.13G218151' => 'gma', 'Glyma.13G238800' => 'gma', 'Glyma.13G276900' => 'gma', 'Glyma.14G078200' => 'gma', 'Glyma.15G074500' => 'gma', 'Glyma.15G094100' => 'gma', 'Glyma.17G247200' => 'gma', 'Glyma.18G120100' => 'gma', 'Glyma.20G176000' => 'gma', 'Gohir.A01G063600' => 'ghi', 'Gohir.A01G170301' => 'ghi', 'Gohir.A02G060500' => 'ghi', 'Gohir.A05G133850' => 'ghi', 'Gohir.A05G161400' => 'ghi', 'Gohir.A06G012900' => 'ghi', 'Gohir.A06G035901' => 'ghi', 'Gohir.A06G127100' => 'ghi', 'Gohir.A06G210500' => 'ghi', 'Gohir.A08G008650' => 'ghi', 'Gohir.A09G072700' => 'ghi', 'Gohir.A09G088301' => 'ghi', 'Gohir.A10G040600' => 'ghi', 'Gohir.A12G036300' => 'ghi', 'Gohir.A12G143350' => 'ghi', 'Gohir.A12G165500' => 'ghi', 'Gohir.A13G145700' => 'ghi', 'Gohir.D01G050000' => 'ghi', 'Gohir.D01G051366' => 'ghi', 'Gohir.D01G161350' => 'ghi', 'Gohir.D02G065900' => 'ghi', 'Gohir.D05G164200' => 'ghi', 'Gohir.D05G355500' => 'ghi', 'Gohir.D06G010400' => 'ghi', 'Gohir.D06G111250' => 'ghi', 'Gohir.D06G132000' => 'ghi', 'Gohir.D06G210500' => 'ghi', 'Gohir.D07G165675' => 'ghi', 'Gohir.D08G062240' => 'ghi', 'Gohir.D08G086101' => 'ghi', 'Gohir.D08G138060' => 'ghi', 'Gohir.D09G072300' => 'ghi', 'Gohir.D10G041400' => 'ghi', 'Gohir.D11G191020' => 'ghi', 'Gohir.D11G212066' => 'ghi', 'Gohir.D12G036300' => 'ghi', 'Gohir.D12G168600' => 'ghi', 'Gohir.D13G150600' => 'ghi', 'Gorai.001G057300' => 'gra', 'Gorai.002G069900' => 'gra', 'Gorai.002G200000' => 'gra', 'Gorai.003G067600' => 'gra', 'Gorai.005G074800' => 'gra', 'Gorai.006G087300' => 'gra', 'Gorai.008G037500' => 'gra', 'Gorai.008G181400' => 'gra', 'Gorai.009G169400' => 'gra', 'Gorai.009G387900' => 'gra', 'Gorai.010G013300' => 'gra', 'Gorai.010G153800' => 'gra', 'Gorai.010G255800' => 'gra', 'Gorai.011G043700' => 'gra', 'Gorai.011G198900' => 'gra', 'Gorai.013G168400' => 'gra', 'GSVIVG01005212001' => 'vvi', 'GSVIVG01006163001' => 'vvi', 'GSVIVG01009625001' => 'vvi', 'GSVIVG01014338001' => 'vvi', 'GSVIVG01020005001' => 'vvi', 'GSVIVG01021450001' => 'vvi', 'GSVIVG01023975001' => 'vvi', 'GSVIVG01034490001' => 'vvi', 'HanXRQChr04g0112071' => 'han', 'HanXRQChr05g0131151' => 'han', 'HanXRQChr09g0262371' => 'han', 'HanXRQChr09g0268401' => 'han', 'HanXRQChr10g0279241' => 'han', 'HanXRQChr10g0297961' => 'han', 'HanXRQChr11g0326231' => 'han', 'HanXRQChr11g0328471' => 'han', 'HanXRQChr16g0507941' => 'han', 'HanXRQChr17g0560211' => 'han', 'Haze_02108' => 'cav', 'Haze_02428' => 'cav', 'Haze_05593' => 'cav', 'Haze_06448' => 'cav', 'Haze_09427' => 'cav', 'Haze_12022' => 'cav', 'Haze_17612' => 'cav', 'Haze_17928' => 'cav', 'Hma1.2p1_0032F.1_g019250' => 'hma', 'Hma1.2p1_0163F.1_g072690' => 'hma', 'Hma1.2p1_0265F.1_g106710' => 'hma', 'Hma1.2p1_0286F.1_g113970' => 'hma', 'Hma1.2p1_0363F.1_g136640' => 'hma', 'Hma1.2p1_0584F.1_g183470' => 'hma', 'Hma1.2p1_0885F.1_g232570' => 'hma', 'HPP92_006022' => 'vpl', 'HPP92_007320' => 'vpl', 'HPP92_011521' => 'vpl', 'HPP92_019387' => 'vpl', 'HPP92_024038' => 'vpl', 'Hund05891' => 'sun', 'Hund06450' => 'sun', 'Hund12053' => 'sun', 'Hund16800' => 'sun', 'Hund21222' => 'sun', 'Hund22896' => 'sun', 'Hund23746' => 'sun', 'Hund27083' => 'sun', 'Lalb_Chr02g0141831' => 'lal', 'Lalb_Chr02g0141841' => 'lal', 'Lalb_Chr05g0220411' => 'lal', 'Lalb_Chr06g0162081' => 'lal', 'Lalb_Chr09g0327651' => 'lal', 'Lalb_Chr13g0295051' => 'lal', 'Lalb_Chr15g0086801' => 'lal', 'Lalb_Chr16g0383781' => 'lal', 'Lalb_Chr16g0383791' => 'lal', 'Lalb_Chr18g0055441' => 'lal', 'Lalb_Chr18g0059611' => 'lal', 'Lalb_Chr20g0109661' => 'lal', 'Lalb_Chr20g0109831' => 'lal', 'Lalb_Chr20g0121871' => 'lal', 'Lalb_Chr22g0355361' => 'lal', 'Lalb_Chr25g0286371' => 'lal', 'Lj1A1187G43' => 'lonja', 'Lj1A1205T50' => 'lonja', 'Lj1A800G33' => 'lonja', 'Lj1C1187T7' => 'lonja', 'Lj1C843T11' => 'lonja', 'Lj1g0010940' => 'lja', 'Lj2A288T69' => 'lonja', 'Lj3g0024276' => 'lja', 'Lj4A47T76' => 'lonja', 'Lj4g0005805' => 'lja', 'Lj4g0006097' => 'lja', 'Lj4g0008528' => 'lja', 'Lj4g0024907' => 'lja', 'Lj5g0012472' => 'lja', 'Lj5g0018648' => 'lja', 'Lj6C789G1' => 'lonja', 'Lj6g0004000' => 'lja', 'Lj7A292G67' => 'lonja', 'Lj7A292T64' => 'lonja', 'Lj9A400T58' => 'lonja', 'Lsat_1_v5_gn_1_126181' => 'lsa', 'Lsat_1_v5_gn_4_123041' => 'lsa', 'Lsat_1_v5_gn_4_133620' => 'lsa', 'Lsat_1_v5_gn_4_53221' => 'lsa', 'Lsat_1_v5_gn_4_71961' => 'lsa', 'Lsat_1_v5_gn_7_105241' => 'lsa', 'Lsat_1_v5_gn_7_21361' => 'lsa', 'Lsat_1_v5_gn_7_28860' => 'lsa', 'Lsat_1_v5_gn_7_31260' => 'lsa', 'Lsat_1_v5_gn_8_52801' => 'lsa', 'Manes.02G191400' => 'mes', 'Manes.03G110100' => 'mes', 'Manes.04G071100' => 'mes', 'Manes.05G100500' => 'mes', 'Manes.05G164700' => 'mes', 'Manes.15G087000' => 'mes', 'Manes.15G121500' => 'mes', 'Manes.16G028300' => 'mes', 'Manes.17G046100' => 'mes', 'Manes.17G069800' => 'mes', 'Manes.18G100500' => 'mes', 'Mapoly0002s0109' => 'mpo', 'Mapoly0024s0007' => 'mpo', 'Mapoly0089s0032' => 'mpo', 'MBI04_g42241_MAGBIO' => 'mbi', 'MBI05_g11988_MAGBIO' => 'mbi', 'MBI05_g35452_MAGBIO' => 'mbi', 'MBI07_g30179_MAGBIO' => 'mbi', 'MBI07_g35859_MAGBIO' => 'mbi', 'MBI07_g35860_MAGBIO' => 'mbi', 'MBI07_g37166_MAGBIO' => 'mbi', 'MBI08_g18172_MAGBIO' => 'mbi', 'MBI09_g08441_MAGBIO' => 'mbi', 'MBI13_g01676_MAGBIO' => 'mbi', 'MBI14_g42955_MAGBIO' => 'mbi', 'MBI16_g13161_MAGBIO' => 'mbi', 'MBI17_g27204_MAGBIO' => 'mbi', 'MBI19_g21595_MAGBIO' => 'mbi', 'MD00G1148400' => 'mdo', 'MD02G1301200' => 'mdo', 'MD03G1227800' => 'mdo', 'MD05G1041100' => 'mdo', 'MD05G1124800' => 'mdo', 'MD05G1284000' => 'mdo', 'MD05G1338800' => 'mdo', 'MD05G1338900' => 'mdo', 'MD07G1022800' => 'mdo', 'MD10G1047500' => 'mdo', 'MD10G1127500' => 'mdo', 'MD10G1262300' => 'mdo', 'MD10G1293800' => 'mdo', 'MD16G1074300' => 'mdo', 'Medtr1g021670' => 'mtr', 'Medtr1g096320' => 'mtr', 'Medtr2g013690' => 'mtr', 'Medtr2g019450' => 'mtr', 'Medtr2g085170' => 'mtr', 'Medtr4g088785' => 'mtr', 'Medtr8g055930' => 'mtr', 'Medtr8g085850' => 'mtr', 'MELO3C002605.2' => 'cme', 'MELO3C003891.2' => 'cme', 'MELO3C004012.2' => 'cme', 'MELO3C007134.2' => 'cme', 'MELO3C008118.2' => 'cme', 'MELO3C016700.2' => 'cme', 'MELO3C024127.2' => 'cme', 'MELO3C033361.2' => 'cme', 'MELO3C033362.2' => 'cme', 'Migut.C00430' => 'egut', 'Migut.C01246' => 'egut', 'Migut.E00101' => 'egut', 'Migut.H01486' => 'egut', 'Migut.H01939' => 'egut', 'Migut.K00360' => 'egut', 'Migut.M00910' => 'egut', 'Migut.M01139' => 'egut', 'Migut.N02677' => 'egut', 'MSTRG.13252' => 'ama', 'MSTRG.14701' => 'ama', 'MSTRG.1521' => 'ama', 'MSTRG.15884' => 'ama', 'MSTRG.16242' => 'ama', 'MSTRG.22285' => 'ama', 'MSTRG.22444' => 'ama', 'MSTRG.2349' => 'ama', 'MSTRG.26308' => 'ama', 'MSTRG.28296' => 'ama', 'MSTRG.9895' => 'ama', 'Nitab4.5_0000110g0060' => 'nta', 'Nitab4.5_0000420g0130' => 'nta', 'Nitab4.5_0000422g0030' => 'nta', 'Nitab4.5_0000560g0180' => 'nta', 'Nitab4.5_0000703g0100' => 'nta', 'Nitab4.5_0000786g0200' => 'nta', 'Nitab4.5_0001336g0020' => 'nta', 'Nitab4.5_0001796g0030' => 'nta', 'Nitab4.5_0003348g0060' => 'nta', 'Nitab4.5_0003698g0040' => 'nta', 'Nitab4.5_0003942g0090' => 'nta', 'Nitab4.5_0004775g0070' => 'nta', 'Nitab4.5_0004864g0030' => 'nta', 'Nitab4.5_0005615g0020' => 'nta', 'Nitab4.5_0009288g0030' => 'nta', 'Nitab4.5_0009341g0010' => 'nta', 'Nitab4.5_0009535g0010' => 'nta', 'Nn1g03995' => 'nnu', 'Nn1g04100' => 'nnu', 'Nn1g06530' => 'nnu', 'Nn3g16404' => 'nnu', 'Nn3g17212' => 'nnu', 'Nn3g20776' => 'nnu', 'Nn3g21923' => 'nnu', 'Nn5g27737' => 'nnu', 'Nn5g29461' => 'nnu', 'Nn7g38355' => 'nnu', 'Nn8g39873' => 'nnu', 'Oeu000548.2' => 'oeu', 'Oeu004672.1' => 'oeu', 'Oeu015605.2' => 'oeu', 'Oeu016092.1' => 'oeu', 'Oeu017879.3' => 'oeu', 'Oeu024910.1' => 'oeu', 'Oeu028965.1' => 'oeu', 'Oeu031269.1' => 'oeu', 'Oeu031270.1' => 'oeu', 'Oeu032535.1' => 'oeu', 'Oeu034151.1' => 'oeu', 'Oeu034152.1' => 'oeu', 'Oeu034588.2' => 'oeu', 'Oeu050846.1' => 'oeu', 'Oeu050849.2' => 'oeu', 'Oeu051063.2' => 'oeu', 'Oeu052368.1' => 'oeu', 'Oeu052370.1' => 'oeu', 'Os01g0210400' => 'osa', 'Os01g0304300' => 'osa', 'Os01g0749100' => 'osa', 'Os02g0745800' => 'osa', 'Os03g0769050' => 'osa', 'Os05g0531500' => 'osa', 'Os06g0724300' => 'osa', 'Os11g0198100' => 'osa', 'Peaxi162Scf00069g01425' => 'pax', 'Peaxi162Scf00280g00811' => 'pax', 'Peaxi162Scf00310g00615' => 'pax', 'Peaxi162Scf00362g00542' => 'pax', 'Peaxi162Scf00461g00310' => 'pax', 'Peaxi162Scf00530g00118' => 'pax', 'Peaxi162Scf00541g00057' => 'pax', 'Peaxi162Scf00661g00017' => 'pax', 'Peaxi162Scf00926g00027' => 'pax', 'Peaxi162Scf01064g00263' => 'pax', 'Peaxi162Scf01211g00135' => 'pax', 'PGR004G2336' => 'pgr', 'PGR042G0327' => 'pgr', 'PGR042G1957' => 'pgr', 'PGR042G2003' => 'pgr', 'PGR042G3929' => 'pgr', 'PGR083G1137' => 'pgr', 'PGR083G1364' => 'pgr', 'PGSC0003DMG400003381' => 'stu', 'PGSC0003DMG400003417' => 'stu', 'PGSC0003DMG400008981' => 'stu', 'PGSC0003DMG400012417' => 'stu', 'PGSC0003DMG400012823' => 'stu', 'PGSC0003DMG400016885' => 'stu', 'PGSC0003DMG400022812' => 'stu', 'PGSC0003DMG400029726' => 'stu', 'PGSC0003DMG401009243' => 'stu', 'PGSC0003DMG401031505' => 'stu', 'PGSC0003DMG402031505' => 'stu', 'Phvul.001G017600' => 'pvu', 'Phvul.002G193500' => 'pvu', 'Phvul.002G228900' => 'pvu', 'Phvul.002G236800' => 'pvu', 'Phvul.003G049500' => 'pvu', 'Phvul.005G072000' => 'pvu', 'Phvul.006G164800' => 'pvu', 'Phvul.006G185100' => 'pvu', 'Phvul.007G090000' => 'pvu', 'Potri.001G399800' => 'ptr', 'Potri.002G149900' => 'ptr', 'Potri.004G044100' => 'ptr', 'Potri.004G177600' => 'ptr', 'Potri.009G138000' => 'ptr', 'Potri.010G094000' => 'ptr', 'Potri.011G053000' => 'ptr', 'Potri.011G119300' => 'ptr', 'Potri.013G113700' => 'ptr', 'Potri.018G107800' => 'ptr', 'Potri.019G084100' => 'ptr', 'Pp3c14_23720' => 'ppa', 'Pp3c16_6340' => 'ppa', 'Pp3c23_13420' => 'ppa', 'Pp3c24_2740' => 'ppa', 'Pp3c25_860' => 'ppa', 'Pp3c8_21750' => 'ppa', 'Prupe.1G273000' => 'ppe', 'Prupe.1G273700' => 'ppe', 'Prupe.1G274100' => 'ppe', 'Prupe.2G023300' => 'ppe', 'Prupe.4G048000' => 'ppe', 'Prupe.4G080400' => 'ppe', 'Prupe.4G181200' => 'ppe', 'Prupe.8G056900' => 'ppe', 'Prupe.8G168700' => 'ppe', 'Psat1g189080' => 'psa', 'Psat1g204760' => 'psa', 'Psat4g175560' => 'psa', 'Psat4g177720' => 'psa', 'Psat5g244240' => 'psa', 'Psat6g010720' => 'psa', 'Psat6g187200' => 'psa', 'Psat7g072040' => 'psa', 'PSO017G3501' => 'pso', 'PSO063G2148' => 'pso', 'PSO063G5608' => 'pso', 'PSO210G6392' => 'pso', 'PSO541G2319' => 'pso', 'PSO541G2836' => 'pso', 'PSO541G4012' => 'pso', 'PSO541G6253' => 'pso', 'PSO675G0580' => 'pso', 'PSO675G0856' => 'pso', 'PSO675G5635' => 'pso', 'PSO675G9157' => 'pso', 'PSO832G1660' => 'pso', 'PSO832G1969' => 'pso', 'QL02p007186' => 'qlo', 'QL02p033904' => 'qlo', 'QL03p064391' => 'qlo', 'QL05p040593' => 'qlo', 'QL05p058242' => 'qlo', 'QL08p021825' => 'qlo', 'QL11p004981' => 'qlo', 'RcHm_v2.0_Chr1g0318301' => 'rch', 'RcHm_v2.0_Chr4g0418501' => 'rch', 'RcHm_v2.0_Chr4g0439971' => 'rch', 'RcHm_v2.0_Chr5g0008541' => 'rch', 'RcHm_v2.0_Chr5g0014101' => 'rch', 'RcHm_v2.0_Chr5g0014131' => 'rch', 'RcHm_v2.0_Chr5g0033621' => 'rch', 'RcHm_v2.0_Chr6g0272041' => 'rch', 'RcHm_v2.0_Chr6g0278831' => 'rch', 'Rhsim02G0130400' => 'rsi', 'Rhsim02G0171100' => 'rsi', 'Rhsim05G0053000' => 'rsi', 'Rhsim05G0053100' => 'rsi', 'Rhsim06G0096500' => 'rsi', 'Rhsim06G0096600' => 'rsi', 'Rhsim06G0199100' => 'rsi', 'Rhsim12G0062300' => 'rsi', 'Rhsim12G0062800' => 'rsi', 'Sabra02G0118600' => 'sbr', 'Sabra04G0027300' => 'sbr', 'Sabra04G0119500' => 'sbr', 'Sabra08G0112500' => 'sbr', 'Sabra11G0036800' => 'sbr', 'Sabra11G0103800' => 'sbr', 'Sabra13G0096300' => 'sbr', 'Sabra16G0262300' => 'sbr', 'Sabra18G0091700' => 'sbr', 'Sabra19G0095400' => 'sbr', 'SalBow6G3080' => 'sbo', 'SalBow7G1157' => 'sbo', 'SalBow7G2123' => 'sbo', 'SalBow7G2285' => 'sbo', 'SalBow7G3537' => 'sbo', 'SalBow8G2947' => 'sbo', 'SalBow8G4463' => 'sbo', 'SalBow8G5466' => 'sbo', 'Sc01g0001750' => 'sci', 'Sc02g0006640' => 'sci', 'Sc02g0006670' => 'sci', 'Sc04g0008220' => 'sci', 'Sc05g0006190' => 'sci', 'Sc08g0002760' => 'sci', 'Sc17g0006170' => 'sci', 'Sc22g0002050' => 'sci', 'Sc23g0001190' => 'sci', 'Sc24g0000980' => 'sci', 'Sed0006245' => 'sed', 'Sed0007543' => 'sed', 'Sed0009411' => 'sed', 'Sed0010765' => 'sed', 'Sed0012944' => 'sed', 'Sed0014682' => 'sed', 'Sed0016174' => 'sed', 'Sed0016796' => 'sed', 'Sed0020317' => 'sed', 'Sed0021467' => 'sed', 'SEGI_01316' => 'sgi', 'SEGI_03374' => 'sgi', 'SEGI_16265' => 'sgi', 'SEGI_18569' => 'sgi', 'SEGI_20351' => 'sgi', 'SEGI_26395' => 'sgi', 'SEGI_29469' => 'sgi', 'SEGI_34771' => 'sgi', 'SEGI_36769' => 'sgi', 'SEGI_37139' => 'sgi', 'SGA_v2.0_scaffold100G29687' => 'sas', 'SGA_v2.0_scaffold118G32472' => 'sas', 'SGA_v2.0_scaffold14G07051' => 'sas', 'SGA_v2.0_scaffold183G39845' => 'sas', 'SGA_v2.0_scaffold1G00174' => 'sas', 'SGA_v2.0_scaffold22G09714' => 'sas', 'SGA_v2.0_scaffold333G48992' => 'sas', 'SGA_v2.0_scaffold46G17491' => 'sas', 'SGA_v2.0_scaffold49G18294' => 'sas', 'SGA_v2.0_scaffold63G21658' => 'sas', 'SHI01741' => 'shi', 'SHI05771' => 'shi', 'SHI18077' => 'shi', 'SHI20525' => 'shi', 'SHI20527' => 'shi', 'SHI20528' => 'shi', 'SMO172G0185' => 'smo', 'SMO198G0020' => 'smo', 'SMO351G0006' => 'smo', 'SMO356G0118' => 'smo', 'SMO358G0296' => 'smo', 'SMO367G0079' => 'smo', 'SMO367G1277' => 'smo', 'Solyc01g014220.3' => 'sly', 'Solyc01g111770.2' => 'sly', 'Solyc02g078180.3' => 'sly', 'Solyc03g006430.3' => 'sly', 'Solyc03g006456.1' => 'sly', 'Solyc03g079860.2' => 'sly', 'Solyc04g079770.3' => 'sly', 'Solyc05g007430.4' => 'sly', 'Solyc07g063150.3' => 'sly', 'Solyc08g016620.3' => 'sly', 'Solyc09g057590.3' => 'sly', 'Solyc09g057600.1' => 'sly', 'Solyc10g009050.3' => 'sly', 'Solyc11g017420.2' => 'sly', 'Sopen01g053810' => 'spe', 'Sopen02g023040' => 'spe', 'Sopen03g002440' => 'spe', 'Sopen04g033350' => 'spe', 'Sopen05g003310' => 'spe', 'Sopen07g004050' => 'spe', 'Sopen07g031340' => 'spe', 'Sopen08g006990' => 'spe', 'Sopen10g004830' => 'spe', 'Sopen11g009370' => 'spe', 'Sp1g24450' => 'spa', 'Sp1g29670' => 'spa', 'Sp1g39600' => 'spa', 'Sp2g11080' => 'spa', 'Sp2g13970' => 'spa', 'Sp4g16130' => 'spa', 'Sp6g13080' => 'spa', 'Sp7g37270' => 'spa', 'TAR371G0065' => 'tar', 'TAR376G0340' => 'tar', 'TAR376G0435' => 'tar', 'TAR381G0002' => 'tar', 'TAR381G1236' => 'tar', 'TAR624G0055' => 'tar', 'TAR624G0324' => 'tar', 'TAR624G0696' => 'tar', 'TAR624G0906' => 'tar', 'TAR625G0107' => 'tar', 'TAR626G0015' => 'tar', 'TAR626G1356' => 'tar', 'TAR627G0888' => 'tar', 'TAR628G0399' => 'tar', 'TAR628G1327' => 'tar', 'TAR629G2831' => 'tar', 'TAR629G2874' => 'tar', 'TAR633G1432' => 'tar', 'TAR633G2771' => 'tar', 'THA.LOC104803394' => 'tha', 'THA.LOC104805153' => 'tha', 'THA.LOC104806784' => 'tha', 'THA.LOC104810473' => 'tha', 'THA.LOC104813100' => 'tha', 'THA.LOC104814215' => 'tha', 'THA.LOC104815554' => 'tha', 'THA.LOC104820544' => 'tha', 'THA.LOC104824754' => 'tha', 'THA.LOC104827717' => 'tha', 'Thecc.02G031400' => 'tca', 'Thecc.02G055900' => 'tca', 'Thecc.02G350800' => 'tca', 'Thecc.06G150900' => 'tca', 'Thecc.06G186600' => 'tca', 'Thecc.07G089600' => 'tca', 'Thecc.08G020400' => 'tca', 'Thecc.08G182100' => 'tca', 'Thhalv10000873m.g' => 'esa', 'Thhalv10004185m.g' => 'esa', 'Thhalv10006981m.g' => 'esa', 'Thhalv10007204m.g' => 'esa', 'Thhalv10011374m.g' => 'esa', 'Thhalv10013482m.g' => 'esa', 'Thhalv10017801m.g' => 'esa', 'Thhalv10024983m.g' => 'esa', 'TPR.G12072' => 'tpr', 'TPR.G15769' => 'tpr', 'TPR.G16504' => 'tpr', 'TPR.G16506' => 'tpr', 'TPR.G24345' => 'tpr', 'TPR.G26666' => 'tpr', 'TPR.G27320' => 'tpr', 'TPR.G31819' => 'tpr', 'TPR.G38879' => 'tpr', 'TPR.G39015' => 'tpr', 'TPR.G8819' => 'tpr', 'TWI09G0924' => 'twi', 'TWI12G0811' => 'twi', 'TWI12G1294' => 'twi', 'TWI31G0150' => 'twi', 'TWI36G1262' => 'twi', 'TWI38G1287' => 'twi', 'TWI38G1633' => 'twi', 'TWI38G1982' => 'twi', 'TWI39G0116' => 'twi', 'TWI60G1011' => 'twi', 'TWI63G0171' => 'twi', 'TWI73G0839' => 'twi', 'TWI79G1511' => 'twi', 'unitig_0.g915' => 'ugi', 'unitig_0.g916' => 'ugi', 'unitig_21.g20219' => 'ugi', 'unitig_21.g20416' => 'ugi', 'unitig_578.g16132' => 'ugi', 'unitig_578.g16718' => 'ugi', 'unitig_62.g23481' => 'ugi', 'unitig_744.g24535' => 'ugi', 'unitig_749.g13525' => 'ugi', 'vmacro01248' => 'vma', 'vmacro02290' => 'vma', 'vmacro10946' => 'vma', 'vmacro11865' => 'vma', 'vmacro12493' => 'vma', 'vmacro17322' => 'vma', 'vmacro21599' => 'vma', 'vmacro23041' => 'vma', 'VMungo0251G0004' => 'vmu', 'VMungo0251G2639' => 'vmu', 'VMungo0251G2967' => 'vmu', 'VMungo0540G0864' => 'vmu', 'VMungo0540G1569' => 'vmu', 'VMungo0647G0317' => 'vmu', 'VMungo0720G1373' => 'vmu', 'VMungo0720G1508' => 'vmu', 'VMungo1080G0485' => 'vmu', 'VMungo1215G3177' => 'vmu', 'Zm00001eb112600' => 'zma', 'Zm00001eb120220' => 'zma', 'Zm00001eb153240' => 'zma', 'Zm00001eb168880' => 'zma', 'Zm00001eb213920' => 'zma', 'Zm00001eb228280' => 'zma', 'Zm00001eb254580' => 'zma', 'Zm00001eb272180' => 'zma', 'Zm00001eb293190' => 'zma', 'Zm00001eb322930' => 'zma', 'Zm00001eb353360' => 'zma', 'Zm00001eb353390' => 'zma', 'Zm00001eb353430' => 'zma', 'Zm00001eb353440' => 'zma', 'Zm00001eb353780' => 'zma' ) $gf_id = 'HOM05D000499' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000499' ) $data_identifier = 'HOM05D000499' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 29, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 12, 'amhyb' => (int) 8, 'aly' => (int) 12, 'aox' => (int) 9, 'arhy' => (int) 26, 'ath' => (int) 8, 'atr' => (int) 7, 'acertr' => (int) 10, 'cqu' => (int) 15, 'bca' => (int) 29, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 11, 'cansat' => (int) 8, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 9, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 8, 'cpa' => (int) 10, 'csa' => (int) 7, 'camsi' => (int) 20, 'dca' => (int) 8, 'din' => (int) 12, 'dzi' => (int) 14, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 6, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 38, 'gra' => (int) 16, 'vvi' => (int) 8, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 5, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 11, 'lja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 11, 'mpo' => (int) 3, 'mbi' => (int) 14, 'mdo' => (int) 14, 'mtr' => (int) 8, 'cme' => (int) 9, 'egut' => (int) 9, 'ama' => (int) 11, 'nta' => (int) 17, 'nnu' => (int) 11, 'oeu' => (int) 18, 'osa' => (int) 8, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 6, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 9, 'rsi' => (int) 9, 'sbr' => (int) 10, 'sbo' => (int) 8, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 10, 'sas' => (int) 10, 'shi' => (int) 6, 'smo' => (int) 7, 'sly' => (int) 14, 'spe' => (int) 10, 'spa' => (int) 8, 'tar' => (int) 19, 'tha' => (int) 10, 'tca' => (int) 8, 'esa' => (int) 8, 'tpr' => (int) 11, 'twi' => (int) 13, 'ugi' => (int) 9, 'vma' => (int) 8, 'vmu' => (int) 10, 'zma' => (int) 15 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb353780' $species_info = array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ) $local_species = 'bca' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000499', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1066', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p29780' => 'bna', 'A02p33180' => 'bna', 'A03p16470' => 'bna', 'A03p66010' => 'bna', 'A04p25970' => 'bna', 'A06p01270' => 'bna', 'A06p46080' => 'bna', 'A07p11400' => 'bna', 'A08p01840' => 'bna', 'A08p08230' => 'bna', 'A08p25740' => 'bna', 'A09p32070' => 'bna', 'A09p37830' => 'bna', 'A09p42840' => 'bna', 'A09p42850' => 'bna', 'Aa31LG10G2060' => 'aar', 'Aa31LG2G7410' => 'aar', 'Aa31LG6G10200' => 'aar', 'Aa31LG6G16680' => 'aar', 'Aa31LG6G8470' => 'aar', 'Aa31LG9G12730' => 'aar', 'Aa31LG9G13680' => 'aar', 'Aa31LG9G14920' => 'aar', 'Aa31LG9G6650' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4977' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5467' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3254' => 'aag', 'Actinidia02578' => 'ach', 'Actinidia07693' => 'ach', 'Actinidia08413' => 'ach', 'Actinidia08414' => 'ach', 'Actinidia15289' => 'ach', 'Actinidia19871' => 'ach', 'Actinidia21475' => 'ach', 'Actinidia22576' => 'ach', 'Actinidia28327' => 'ach', 'Actinidia32491' => 'ach', 'Actinidia39463' => 'ach', 'Actinidia39571' => 'ach', 'Ah.01g013750' => 'amhyb', 'Ah.01g023210' => 'amhyb', 'Ah.04g164850' => 'amhyb', 'Ah.05g178060' => 'amhyb', 'Ah.07g204270' => 'amhyb', 'Ah.07g208480' => 'amhyb', 'Ah.09g237410' => 'amhyb', 'Ah.14g089460' => 'amhyb', 'AL1G41790' => 'aly', 'AL1G49050' => 'aly', 'AL1G53810' => 'aly', 'AL1G61400' => 'aly', 'AL4G18580' => 'aly', 'AL5G12510' => 'aly', 'AL5G12540' => 'aly', 'AL6G43230' => 'aly', 'AL7G10370' => 'aly', 'AL7G19250' => 'aly', 'AL8G12240' => 'aly', 'AL8G18540' => 'aly', 'Aqoxy1G02409' => 'aox', 'Aqoxy2G03993' => 'aox', 'Aqoxy3G03357' => 'aox', 'Aqoxy4G00785' => 'aox', 'Aqoxy5G02598' => 'aox', 'Aqoxy6G00132' => 'aox', 'Aqoxy7G01776' => 'aox', 'Aqoxy7G02316' => 'aox', 'Aqoxy7G03973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.12AFKW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B8730' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27IQR1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3F75VG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3RE0GA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41TCQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.527VTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FIR39' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5W8UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DA38EV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ63HS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H1I32C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HC27T5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4M8AP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7N3CZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9UVDZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LS1NQA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT1D4B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SKC4TM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCFV76' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF9Q1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQWD9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1ZM88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WE07RT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YCK7VH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJE6Q6' => 'arhy', 'AT1G28240' => 'ath', 'AT1G34550' => 'ath', 'AT1G53040' => 'ath', 'AT2G02910' => 'ath', 'AT4G09630' => 'ath', 'AT4G38500' => 'ath', 'AT5G42660' => 'ath', 'AT5G46220' => 'ath', 'ATR0152G026' => 'atr', 'ATR0564G343' => 'atr', 'ATR0706G151' => 'atr', 'ATR0733G207' => 'atr', 'ATR0751G234' => 'atr', 'ATR0807G048' => 'atr', 'ATR1091G084' => 'atr', 'Atru.chr10.1229' => 'acertr', 'Atru.chr10.1230' => 'acertr', 'Atru.chr10.1874' => 'acertr', 'Atru.chr11.1808' => 'acertr', 'Atru.chr13.1795' => 'acertr', 'Atru.chr13.570' => 'acertr', 'Atru.chr2.2608' => 'acertr', 'Atru.chr2.2609' => 'acertr', 'Atru.chr5.3428' => 'acertr', 'Atru.chr8.1171' => 'acertr', 'AUR62004651' => 'cqu', 'AUR62008675' => 'cqu', 'AUR62010014' => 'cqu', 'AUR62013004' => 'cqu', 'AUR62014825' => 'cqu', 'AUR62015015' => 'cqu', 'AUR62015151' => 'cqu', 'AUR62017020' => 'cqu', 'AUR62019422' => 'cqu', 'AUR62023570' => 'cqu', 'AUR62025571' => 'cqu', 'AUR62029098' => 'cqu', 'AUR62033863' => 'cqu', 'AUR62034296' => 'cqu', 'AUR62040075' => 'cqu', 'BcaB02g07334' => 'bca', 'BcaB02g10575' => 'bca', 'BcaB03g12119' => 'bca', 'BcaB03g12120' => 'bca', 'BcaB03g13945' => 'bca', 'BcaB04g17123' => 'bca', 'BcaB04g17867' => 'bca', 'BcaB04g19839' => 'bca', 'BcaB07g30317' => 'bca', 'BcaB07g32432' => 'bca', 'BcaB07g33362' => 'bca', 'BcaB08g36611' => 'bca', 'BcaC01g00028' => 'bca', 'BcaC01g01356' => 'bca', 'BcaC01g02034' => 'bca', 'BcaC01g06051' => 'bca', 'BcaC03g16839' => 'bca', 'BcaC03g17176' => 'bca', 'BcaC05g26829' => 'bca', 'BcaC06g31490' => 'bca', 'BcaC06g35344' => 'bca', 'BcaC06g36570' => 'bca', 'BcaC07g37537' => 'bca', 'BcaC08g43491' => 'bca', 'BcaC08g43773' => 'bca', 'BcaNung00234' => 'bca', 'BcaNung01982' => 'bca', 'BcaNung03707' => 'bca', 'BcaNung06454' => 'bca', 'BolC2t10762H' => 'bol', 'BolC2t11191H' => 'bol', 'BolC3t14322H' => 'bol', 'BolC3t19747H' => 'bol', 'BolC3t21425H' => 'bol', 'BolC4t27800H' => 'bol', 'BolC5t31423H' => 'bol', 'BolC6t35951H' => 'bol', 'BolC6t36282H' => 'bol', 'BolC7t40678H' => 'bol', 'BolC7t40679H' => 'bol', 'BolC7t42222H' => 'bol', 'BolC7t43492H' => 'bol', 'BolC7t46785H' => 'bol', 'BolC8t47853H' => 'bol', 'BolC9t56805H' => 'bol', 'BraA02t08000Z' => 'bra', 'BraA02t08341Z' => 'bra', 'BraA03t10936Z' => 'bra', 'BraA03t15657Z' => 'bra', 'BraA04t18100Z' => 'bra', 'BraA05t20523Z' => 'bra', 'BraA06t23353Z' => 'bra', 'BraA06t27473Z' => 'bra', 'BraA06t27769Z' => 'bra', 'BraA07t28928Z' => 'bra', 'BraA08t32236Z' => 'bra', 'BraA08t32841Z' => 'bra', 'BraA08t34524Z' => 'bra', 'BraA09t38742Z' => 'bra', 'BraA09t39295Z' => 'bra', 'C02p47180' => 'bna', 'C02p50990' => 'bna', 'C03p19360' => 'bna', 'C03p74950' => 'bna', 'C03p91000' => 'bna', 'C04p63260' => 'bna', 'C05p27050' => 'bna', 'C06p08750' => 'bna', 'C06p11490' => 'bna', 'C07p02820' => 'bna', 'C07p17180' => 'bna', 'C07p29440' => 'bna', 'C07p63730' => 'bna', 'C09p39260' => 'bna', 'CAN.G1164.34' => 'can', 'CAN.G1164.39' => 'can', 'CAN.G1530.3' => 'can', 'CAN.G162.61' => 'can', 'CAN.G176.6' => 'can', 'CAN.G289.49' => 'can', 'CAN.G370.21' => 'can', 'CAN.G370.22' => 'can', 'CAN.G371.117' => 'can', 'CAN.G58.37' => 'can', 'CAN.G588.98' => 'can', 'CANSAT21G2266' => 'cansat', 'CANSAT25G2799' => 'cansat', 'CANSAT35G0862' => 'cansat', 'CANSAT35G1704' => 'cansat', 'CANSAT35G1760' => 'cansat', 'CANSAT56G3971' => 'cansat', 'CANSAT56G4116' => 'cansat', 'CANSAT80G1259' => 'cansat', 'CARHR027730' => 'chi', 'CARHR033880' => 'chi', 'CARHR043270' => 'chi', 'CARHR145330' => 'chi', 'CARHR145340' => 'chi', 'CARHR175570' => 'chi', 'CARHR181570' => 'chi', 'CARHR258470' => 'chi', 'CARHR260490' => 'chi', 'CARHR294220' => 'chi', 'Carub.0001s2668' => 'cru', 'Carub.0001s3257' => 'cru', 'Carub.0001s4220' => 'cru', 'Carub.0005s0179' => 'cru', 'Carub.0006s2807' => 'cru', 'Carub.0007s0039' => 'cru', 'Carub.0008s0169' => 'cru', 'Carub.0008s0636' => 'cru', 'Ca_00338_v3' => 'car', 'Ca_00542_v3' => 'car', 'Ca_01844_v3' => 'car', 'Ca_10611_v3' => 'car', 'Ca_13326_v3' => 'car', 'Ca_17944_v3' => 'car', 'Ca_18546_v3' => 'car', 'Ca_24219_v3' => 'car', 'Ca_29972_v3' => 'car', 'CBR_g3681' => 'cbr', 'CBR_g40021' => 'cbr', 'Cc01_g08140' => 'ccan', 'Cc02_g13410' => 'ccan', 'Cc02_g37480' => 'ccan', 'Cc05_g12030' => 'ccan', 'Cc09_g03370' => 'ccan', 'Cc09_g10300' => 'ccan', 'Cc10_g03530' => 'ccan', 'Cc10_g11380' => 'ccan', 'CDE01G0176' => 'cde', 'CDE02G0675' => 'cde', 'CDE02G0942' => 'cde', 'CDE02G1153' => 'cde', 'CDE02G4177' => 'cde', 'CDE04G2117' => 'cde', 'CDE04G2736' => 'cde', 'CDE08G1161' => 'cde', 'CDE09G1238' => 'cde', 'Cfa000467' => 'cfa', 'Cfa000947' => 'cfa', 'Cfa004969' => 'cfa', 'Cfa005284' => 'cfa', 'Cfa008993' => 'cfa', 'Cfa018187' => 'cfa', 'Cfa018454' => 'cfa', 'Cfa020585' => 'cfa', 'Ciclev10000424m.g' => 'ccl', 'Ciclev10003605m.g' => 'ccl', 'Ciclev10007828m.g' => 'ccl', 'Ciclev10014620m.g' => 'ccl', 'Ciclev10015169m.g' => 'ccl', 'Ciclev10018291m.g' => 'ccl', 'Ciclev10028256m.g' => 'ccl', 'Ciclev10033822m.g' => 'ccl', 'CiPaw.05G060300' => 'cil', 'CiPaw.05G085000' => 'cil', 'CiPaw.06G083700' => 'cil', 'CiPaw.06G120300' => 'cil', 'CiPaw.09G060500' => 'cil', 'CiPaw.09G123800' => 'cil', 'CiPaw.11G169700' => 'cil', 'CiPaw.12G118300' => 'cil', 'CiPaw.15G071000' => 'cil', 'CiPaw.15G081900' => 'cil', 'ClCG01G024610' => 'cla', 'ClCG03G006070' => 'cla', 'ClCG05G019250' => 'cla', 'ClCG09G009500' => 'cla', 'ClCG11G008200' => 'cla', 'ClCG11G018080' => 'cla', 'COL.COLO4_17373' => 'col', 'COL.COLO4_22994' => 'col', 'COL.COLO4_26389' => 'col', 'COL.COLO4_27170' => 'col', 'COL.COLO4_31074' => 'col', 'COL.COLO4_31465' => 'col', 'COL.COLO4_36438' => 'col', 'COL.COLO4_36439' => 'col', 'Cpa.g.c38781' => 'cpa', 'Cpa.g.sc128.12' => 'cpa', 'Cpa.g.sc166.7' => 'cpa', 'Cpa.g.sc166.8' => 'cpa', 'Cpa.g.sc20.111' => 'cpa', 'Cpa.g.sc27.31' => 'cpa', 'Cpa.g.sc64.36' => 'cpa', 'Cpa.g.sc64.37' => 'cpa', 'Cpa.g.sc66.49' => 'cpa', 'Cpa.g.sc80.64' => 'cpa', 'CsaV3_1G012320' => 'csa', 'CsaV3_2G008480' => 'csa', 'CsaV3_2G033450' => 'csa', 'CsaV3_3G044830' => 'csa', 'CsaV3_4G033710' => 'csa', 'CsaV3_6G051730' => 'csa', 'CsaV3_7G025350' => 'csa', 'CSS0001067' => 'camsi', 'CSS0005996' => 'camsi', 'CSS0006590' => 'camsi', 'CSS0009673' => 'camsi', 'CSS0010201' => 'camsi', 'CSS0010549' => 'camsi', 'CSS0011364' => 'camsi', 'CSS0014473' => 'camsi', 'CSS0014961' => 'camsi', 'CSS0020191' => 'camsi', 'CSS0021165' => 'camsi', 'CSS0022306' => 'camsi', 'CSS0030591' => 'camsi', 'CSS0030696' => 'camsi', 'CSS0032653' => 'camsi', 'CSS0037487' => 'camsi', 'CSS0041102' => 'camsi', 'CSS0041261' => 'camsi', 'CSS0046246' => 'camsi', 'CSS0049256' => 'camsi', 'DCAR_004075' => 'dca', 'DCAR_011538' => 'dca', 'DCAR_019553' => 'dca', 'DCAR_020952' => 'dca', 'DCAR_021739' => 'dca', 'DCAR_027407' => 'dca', 'DCAR_027913' => 'dca', 'DCAR_028066' => 'dca', 'Dinv05899' => 'din', 'Dinv07563' => 'din', 'Dinv08010' => 'din', 'Dinv14125' => 'din', 'Dinv20172' => 'din', 'Dinv30743' => 'din', 'Dinv31229' => 'din', 'Dinv34162' => 'din', 'Dinv36028' => 'din', 'Dinv39368' => 'din', 'Dinv40565' => 'din', 'Dinv41706' => 'din', 'Duzib052G0089' => 'dzi', 'Duzib116G0641' => 'dzi', 'Duzib132G0069' => 'dzi', 'Duzib132G1219' => 'dzi', 'Duzib147G0278' => 'dzi', 'Duzib160G0480' => 'dzi', 'Duzib170G0661' => 'dzi', 'Duzib177G0591' => 'dzi', 'Duzib187G1353' => 'dzi', 'Duzib192G0858' => 'dzi', 'Duzib192G0883' => 'dzi', 'Duzib213G0506' => 'dzi', 'Duzib235G0289' => 'dzi', 'Duzib251G0422' => 'dzi', 'ECA232G3898' => 'eca', 'ECA233G5950' => 'eca', 'ECA234G1699' => 'eca', 'ECA234G2421' => 'eca', 'ECA236G0426' => 'eca', 'ECA236G4331' => 'eca', 'ECA248G2573' => 'eca', 'EL10Ac1g00077' => 'bvu', 'EL10Ac1g01746' => 'bvu', 'EL10Ac2g03464' => 'bvu', 'EL10Ac4g08176' => 'bvu', 'EL10Ac7g17521' => 'bvu', 'EL10Ac8g20386' => 'bvu', 'EL10Ac9g21343' => 'bvu', 'EL10Ac9g22688' => 'bvu', 'Eucgr.B03434' => 'egr', 'Eucgr.D00618' => 'egr', 'Eucgr.E02395' => 'egr', 'Eucgr.F01129' => 'egr', 'Eucgr.F02622' => 'egr', 'Eucgr.F04207' => 'egr', 'FAN01G0570' => 'fan', 'FAN03G3351' => 'fan', 'FAN06G3702' => 'fan', 'FAN07G2149' => 'fan', 'FAN10G3758' => 'fan', 'FAN11G1170' => 'fan', 'FAN11G2050' => 'fan', 'FAN11G2724' => 'fan', 'FAN12G1700' => 'fan', 'FAN12G2028' => 'fan', 'FAN15G1160' => 'fan', 'FAN15G3063' => 'fan', 'FAN16G2540' => 'fan', 'FAN16G3077' => 'fan', 'FAN16G3624' => 'fan', 'FAN17G0221' => 'fan', 'FAN20G2492' => 'fan', 'FAN20G2905' => 'fan', 'FAN21G0548' => 'fan', 'FAN21G1300' => 'fan', 'FAN22G0077' => 'fan', 'FAN22G1315' => 'fan', 'FAN24G1280' => 'fan', 'FAN24G1445' => 'fan', 'FAN24G3527' => 'fan', 'FAN25G0464' => 'fan', 'FAN25G2885' => 'fan', 'FAN25G3270' => 'fan', 'FAN27G1101' => 'fan', 'FAN27G2846' => 'fan', 'FAN27G3524' => 'fan', 'FvH4_2g11770' => 'fve', 'FvH4_2g15630' => 'fve', 'FvH4_3g05570' => 'fve', 'FvH4_3g09110' => 'fve', 'FvH4_3g19940' => 'fve', 'FvH4_4g04821' => 'fve', 'FvH4_4g31480' => 'fve', 'FvH4_7g01740' => 'fve', 'Glyma.05G130400' => 'gma', 'Glyma.05G156400' => 'gma', 'Glyma.07G197000' => 'gma', 'Glyma.08G085151' => 'gma', 'Glyma.08G114500' => 'gma', 'Glyma.08G300400' => 'gma', 'Glyma.10G215800' => 'gma', 'Glyma.12G224400' => 'gma', 'Glyma.13G179300' => 'gma', 'Glyma.13G218151' => 'gma', 'Glyma.13G238800' => 'gma', 'Glyma.13G276900' => 'gma', 'Glyma.14G078200' => 'gma', 'Glyma.15G074500' => 'gma', 'Glyma.15G094100' => 'gma', 'Glyma.17G247200' => 'gma', 'Glyma.18G120100' => 'gma', 'Glyma.20G176000' => 'gma', 'Gohir.A01G063600' => 'ghi', 'Gohir.A01G170301' => 'ghi', 'Gohir.A02G060500' => 'ghi', 'Gohir.A05G133850' => 'ghi', 'Gohir.A05G161400' => 'ghi', 'Gohir.A06G012900' => 'ghi', 'Gohir.A06G035901' => 'ghi', 'Gohir.A06G127100' => 'ghi', 'Gohir.A06G210500' => 'ghi', 'Gohir.A08G008650' => 'ghi', 'Gohir.A09G072700' => 'ghi', 'Gohir.A09G088301' => 'ghi', 'Gohir.A10G040600' => 'ghi', 'Gohir.A12G036300' => 'ghi', 'Gohir.A12G143350' => 'ghi', 'Gohir.A12G165500' => 'ghi', 'Gohir.A13G145700' => 'ghi', 'Gohir.D01G050000' => 'ghi', 'Gohir.D01G051366' => 'ghi', 'Gohir.D01G161350' => 'ghi', 'Gohir.D02G065900' => 'ghi', 'Gohir.D05G164200' => 'ghi', 'Gohir.D05G355500' => 'ghi', 'Gohir.D06G010400' => 'ghi', 'Gohir.D06G111250' => 'ghi', 'Gohir.D06G132000' => 'ghi', 'Gohir.D06G210500' => 'ghi', 'Gohir.D07G165675' => 'ghi', 'Gohir.D08G062240' => 'ghi', 'Gohir.D08G086101' => 'ghi', 'Gohir.D08G138060' => 'ghi', 'Gohir.D09G072300' => 'ghi', 'Gohir.D10G041400' => 'ghi', 'Gohir.D11G191020' => 'ghi', 'Gohir.D11G212066' => 'ghi', 'Gohir.D12G036300' => 'ghi', 'Gohir.D12G168600' => 'ghi', 'Gohir.D13G150600' => 'ghi', 'Gorai.001G057300' => 'gra', 'Gorai.002G069900' => 'gra', 'Gorai.002G200000' => 'gra', 'Gorai.003G067600' => 'gra', 'Gorai.005G074800' => 'gra', 'Gorai.006G087300' => 'gra', 'Gorai.008G037500' => 'gra', 'Gorai.008G181400' => 'gra', 'Gorai.009G169400' => 'gra', 'Gorai.009G387900' => 'gra', 'Gorai.010G013300' => 'gra', 'Gorai.010G153800' => 'gra', 'Gorai.010G255800' => 'gra', 'Gorai.011G043700' => 'gra', 'Gorai.011G198900' => 'gra', 'Gorai.013G168400' => 'gra', 'GSVIVG01005212001' => 'vvi', 'GSVIVG01006163001' => 'vvi', 'GSVIVG01009625001' => 'vvi', 'GSVIVG01014338001' => 'vvi', 'GSVIVG01020005001' => 'vvi', 'GSVIVG01021450001' => 'vvi', 'GSVIVG01023975001' => 'vvi', 'GSVIVG01034490001' => 'vvi', 'HanXRQChr04g0112071' => 'han', 'HanXRQChr05g0131151' => 'han', 'HanXRQChr09g0262371' => 'han', 'HanXRQChr09g0268401' => 'han', 'HanXRQChr10g0279241' => 'han', 'HanXRQChr10g0297961' => 'han', 'HanXRQChr11g0326231' => 'han', 'HanXRQChr11g0328471' => 'han', 'HanXRQChr16g0507941' => 'han', 'HanXRQChr17g0560211' => 'han', 'Haze_02108' => 'cav', 'Haze_02428' => 'cav', 'Haze_05593' => 'cav', 'Haze_06448' => 'cav', 'Haze_09427' => 'cav', 'Haze_12022' => 'cav', 'Haze_17612' => 'cav', 'Haze_17928' => 'cav', 'Hma1.2p1_0032F.1_g019250' => 'hma', 'Hma1.2p1_0163F.1_g072690' => 'hma', 'Hma1.2p1_0265F.1_g106710' => 'hma', 'Hma1.2p1_0286F.1_g113970' => 'hma', 'Hma1.2p1_0363F.1_g136640' => 'hma', 'Hma1.2p1_0584F.1_g183470' => 'hma', 'Hma1.2p1_0885F.1_g232570' => 'hma', 'HPP92_006022' => 'vpl', 'HPP92_007320' => 'vpl', 'HPP92_011521' => 'vpl', 'HPP92_019387' => 'vpl', 'HPP92_024038' => 'vpl', 'Hund05891' => 'sun', 'Hund06450' => 'sun', 'Hund12053' => 'sun', 'Hund16800' => 'sun', 'Hund21222' => 'sun', 'Hund22896' => 'sun', 'Hund23746' => 'sun', 'Hund27083' => 'sun', 'Lalb_Chr02g0141831' => 'lal', 'Lalb_Chr02g0141841' => 'lal', 'Lalb_Chr05g0220411' => 'lal', 'Lalb_Chr06g0162081' => 'lal', 'Lalb_Chr09g0327651' => 'lal', 'Lalb_Chr13g0295051' => 'lal', 'Lalb_Chr15g0086801' => 'lal', 'Lalb_Chr16g0383781' => 'lal', 'Lalb_Chr16g0383791' => 'lal', 'Lalb_Chr18g0055441' => 'lal', 'Lalb_Chr18g0059611' => 'lal', 'Lalb_Chr20g0109661' => 'lal', 'Lalb_Chr20g0109831' => 'lal', 'Lalb_Chr20g0121871' => 'lal', 'Lalb_Chr22g0355361' => 'lal', 'Lalb_Chr25g0286371' => 'lal', 'Lj1A1187G43' => 'lonja', 'Lj1A1205T50' => 'lonja', 'Lj1A800G33' => 'lonja', 'Lj1C1187T7' => 'lonja', 'Lj1C843T11' => 'lonja', 'Lj1g0010940' => 'lja', 'Lj2A288T69' => 'lonja', 'Lj3g0024276' => 'lja', 'Lj4A47T76' => 'lonja', 'Lj4g0005805' => 'lja', 'Lj4g0006097' => 'lja', 'Lj4g0008528' => 'lja', 'Lj4g0024907' => 'lja', 'Lj5g0012472' => 'lja', 'Lj5g0018648' => 'lja', 'Lj6C789G1' => 'lonja', 'Lj6g0004000' => 'lja', 'Lj7A292G67' => 'lonja', 'Lj7A292T64' => 'lonja', 'Lj9A400T58' => 'lonja', 'Lsat_1_v5_gn_1_126181' => 'lsa', 'Lsat_1_v5_gn_4_123041' => 'lsa', 'Lsat_1_v5_gn_4_133620' => 'lsa', 'Lsat_1_v5_gn_4_53221' => 'lsa', 'Lsat_1_v5_gn_4_71961' => 'lsa', 'Lsat_1_v5_gn_7_105241' => 'lsa', 'Lsat_1_v5_gn_7_21361' => 'lsa', 'Lsat_1_v5_gn_7_28860' => 'lsa', 'Lsat_1_v5_gn_7_31260' => 'lsa', 'Lsat_1_v5_gn_8_52801' => 'lsa', 'Manes.02G191400' => 'mes', 'Manes.03G110100' => 'mes', 'Manes.04G071100' => 'mes', 'Manes.05G100500' => 'mes', 'Manes.05G164700' => 'mes', 'Manes.15G087000' => 'mes', 'Manes.15G121500' => 'mes', 'Manes.16G028300' => 'mes', 'Manes.17G046100' => 'mes', 'Manes.17G069800' => 'mes', 'Manes.18G100500' => 'mes', 'Mapoly0002s0109' => 'mpo', 'Mapoly0024s0007' => 'mpo', 'Mapoly0089s0032' => 'mpo', 'MBI04_g42241_MAGBIO' => 'mbi', 'MBI05_g11988_MAGBIO' => 'mbi', 'MBI05_g35452_MAGBIO' => 'mbi', 'MBI07_g30179_MAGBIO' => 'mbi', 'MBI07_g35859_MAGBIO' => 'mbi', 'MBI07_g35860_MAGBIO' => 'mbi', 'MBI07_g37166_MAGBIO' => 'mbi', 'MBI08_g18172_MAGBIO' => 'mbi', 'MBI09_g08441_MAGBIO' => 'mbi', 'MBI13_g01676_MAGBIO' => 'mbi', 'MBI14_g42955_MAGBIO' => 'mbi', 'MBI16_g13161_MAGBIO' => 'mbi', 'MBI17_g27204_MAGBIO' => 'mbi', 'MBI19_g21595_MAGBIO' => 'mbi', 'MD00G1148400' => 'mdo', 'MD02G1301200' => 'mdo', 'MD03G1227800' => 'mdo', 'MD05G1041100' => 'mdo', 'MD05G1124800' => 'mdo', 'MD05G1284000' => 'mdo', 'MD05G1338800' => 'mdo', 'MD05G1338900' => 'mdo', 'MD07G1022800' => 'mdo', 'MD10G1047500' => 'mdo', 'MD10G1127500' => 'mdo', 'MD10G1262300' => 'mdo', 'MD10G1293800' => 'mdo', 'MD16G1074300' => 'mdo', 'Medtr1g021670' => 'mtr', 'Medtr1g096320' => 'mtr', 'Medtr2g013690' => 'mtr', 'Medtr2g019450' => 'mtr', 'Medtr2g085170' => 'mtr', 'Medtr4g088785' => 'mtr', 'Medtr8g055930' => 'mtr', 'Medtr8g085850' => 'mtr', 'MELO3C002605.2' => 'cme', 'MELO3C003891.2' => 'cme', 'MELO3C004012.2' => 'cme', 'MELO3C007134.2' => 'cme', 'MELO3C008118.2' => 'cme', 'MELO3C016700.2' => 'cme', 'MELO3C024127.2' => 'cme', 'MELO3C033361.2' => 'cme', 'MELO3C033362.2' => 'cme', 'Migut.C00430' => 'egut', 'Migut.C01246' => 'egut', 'Migut.E00101' => 'egut', 'Migut.H01486' => 'egut', 'Migut.H01939' => 'egut', 'Migut.K00360' => 'egut', 'Migut.M00910' => 'egut', 'Migut.M01139' => 'egut', 'Migut.N02677' => 'egut', 'MSTRG.13252' => 'ama', 'MSTRG.14701' => 'ama', 'MSTRG.1521' => 'ama', 'MSTRG.15884' => 'ama', 'MSTRG.16242' => 'ama', 'MSTRG.22285' => 'ama', 'MSTRG.22444' => 'ama', 'MSTRG.2349' => 'ama', 'MSTRG.26308' => 'ama', 'MSTRG.28296' => 'ama', 'MSTRG.9895' => 'ama', 'Nitab4.5_0000110g0060' => 'nta', 'Nitab4.5_0000420g0130' => 'nta', 'Nitab4.5_0000422g0030' => 'nta', 'Nitab4.5_0000560g0180' => 'nta', 'Nitab4.5_0000703g0100' => 'nta', 'Nitab4.5_0000786g0200' => 'nta', 'Nitab4.5_0001336g0020' => 'nta', 'Nitab4.5_0001796g0030' => 'nta', 'Nitab4.5_0003348g0060' => 'nta', 'Nitab4.5_0003698g0040' => 'nta', 'Nitab4.5_0003942g0090' => 'nta', 'Nitab4.5_0004775g0070' => 'nta', 'Nitab4.5_0004864g0030' => 'nta', 'Nitab4.5_0005615g0020' => 'nta', 'Nitab4.5_0009288g0030' => 'nta', 'Nitab4.5_0009341g0010' => 'nta', 'Nitab4.5_0009535g0010' => 'nta', 'Nn1g03995' => 'nnu', 'Nn1g04100' => 'nnu', 'Nn1g06530' => 'nnu', 'Nn3g16404' => 'nnu', 'Nn3g17212' => 'nnu', 'Nn3g20776' => 'nnu', 'Nn3g21923' => 'nnu', 'Nn5g27737' => 'nnu', 'Nn5g29461' => 'nnu', 'Nn7g38355' => 'nnu', 'Nn8g39873' => 'nnu', 'Oeu000548.2' => 'oeu', 'Oeu004672.1' => 'oeu', 'Oeu015605.2' => 'oeu', 'Oeu016092.1' => 'oeu', 'Oeu017879.3' => 'oeu', 'Oeu024910.1' => 'oeu', 'Oeu028965.1' => 'oeu', 'Oeu031269.1' => 'oeu', 'Oeu031270.1' => 'oeu', 'Oeu032535.1' => 'oeu', 'Oeu034151.1' => 'oeu', 'Oeu034152.1' => 'oeu', 'Oeu034588.2' => 'oeu', 'Oeu050846.1' => 'oeu', 'Oeu050849.2' => 'oeu', 'Oeu051063.2' => 'oeu', 'Oeu052368.1' => 'oeu', 'Oeu052370.1' => 'oeu', 'Os01g0210400' => 'osa', 'Os01g0304300' => 'osa', 'Os01g0749100' => 'osa', 'Os02g0745800' => 'osa', 'Os03g0769050' => 'osa', 'Os05g0531500' => 'osa', 'Os06g0724300' => 'osa', 'Os11g0198100' => 'osa', 'Peaxi162Scf00069g01425' => 'pax', 'Peaxi162Scf00280g00811' => 'pax', 'Peaxi162Scf00310g00615' => 'pax', 'Peaxi162Scf00362g00542' => 'pax', 'Peaxi162Scf00461g00310' => 'pax', 'Peaxi162Scf00530g00118' => 'pax', 'Peaxi162Scf00541g00057' => 'pax', 'Peaxi162Scf00661g00017' => 'pax', 'Peaxi162Scf00926g00027' => 'pax', 'Peaxi162Scf01064g00263' => 'pax', 'Peaxi162Scf01211g00135' => 'pax', 'PGR004G2336' => 'pgr', 'PGR042G0327' => 'pgr', 'PGR042G1957' => 'pgr', 'PGR042G2003' => 'pgr', 'PGR042G3929' => 'pgr', 'PGR083G1137' => 'pgr', 'PGR083G1364' => 'pgr', 'PGSC0003DMG400003381' => 'stu', 'PGSC0003DMG400003417' => 'stu', 'PGSC0003DMG400008981' => 'stu', 'PGSC0003DMG400012417' => 'stu', 'PGSC0003DMG400012823' => 'stu', 'PGSC0003DMG400016885' => 'stu', 'PGSC0003DMG400022812' => 'stu', 'PGSC0003DMG400029726' => 'stu', 'PGSC0003DMG401009243' => 'stu', 'PGSC0003DMG401031505' => 'stu', 'PGSC0003DMG402031505' => 'stu', 'Phvul.001G017600' => 'pvu', 'Phvul.002G193500' => 'pvu', 'Phvul.002G228900' => 'pvu', 'Phvul.002G236800' => 'pvu', 'Phvul.003G049500' => 'pvu', 'Phvul.005G072000' => 'pvu', 'Phvul.006G164800' => 'pvu', 'Phvul.006G185100' => 'pvu', 'Phvul.007G090000' => 'pvu', 'Potri.001G399800' => 'ptr', 'Potri.002G149900' => 'ptr', 'Potri.004G044100' => 'ptr', 'Potri.004G177600' => 'ptr', 'Potri.009G138000' => 'ptr', 'Potri.010G094000' => 'ptr', 'Potri.011G053000' => 'ptr', 'Potri.011G119300' => 'ptr', 'Potri.013G113700' => 'ptr', 'Potri.018G107800' => 'ptr', 'Potri.019G084100' => 'ptr', 'Pp3c14_23720' => 'ppa', 'Pp3c16_6340' => 'ppa', 'Pp3c23_13420' => 'ppa', 'Pp3c24_2740' => 'ppa', 'Pp3c25_860' => 'ppa', 'Pp3c8_21750' => 'ppa', 'Prupe.1G273000' => 'ppe', 'Prupe.1G273700' => 'ppe', 'Prupe.1G274100' => 'ppe', 'Prupe.2G023300' => 'ppe', 'Prupe.4G048000' => 'ppe', 'Prupe.4G080400' => 'ppe', 'Prupe.4G181200' => 'ppe', 'Prupe.8G056900' => 'ppe', 'Prupe.8G168700' => 'ppe', 'Psat1g189080' => 'psa', 'Psat1g204760' => 'psa', 'Psat4g175560' => 'psa', 'Psat4g177720' => 'psa', 'Psat5g244240' => 'psa', 'Psat6g010720' => 'psa', 'Psat6g187200' => 'psa', 'Psat7g072040' => 'psa', 'PSO017G3501' => 'pso', 'PSO063G2148' => 'pso', 'PSO063G5608' => 'pso', 'PSO210G6392' => 'pso', 'PSO541G2319' => 'pso', 'PSO541G2836' => 'pso', 'PSO541G4012' => 'pso', 'PSO541G6253' => 'pso', 'PSO675G0580' => 'pso', 'PSO675G0856' => 'pso', 'PSO675G5635' => 'pso', 'PSO675G9157' => 'pso', 'PSO832G1660' => 'pso', 'PSO832G1969' => 'pso', 'QL02p007186' => 'qlo', 'QL02p033904' => 'qlo', 'QL03p064391' => 'qlo', 'QL05p040593' => 'qlo', 'QL05p058242' => 'qlo', 'QL08p021825' => 'qlo', 'QL11p004981' => 'qlo', 'RcHm_v2.0_Chr1g0318301' => 'rch', 'RcHm_v2.0_Chr4g0418501' => 'rch', 'RcHm_v2.0_Chr4g0439971' => 'rch', 'RcHm_v2.0_Chr5g0008541' => 'rch', 'RcHm_v2.0_Chr5g0014101' => 'rch', 'RcHm_v2.0_Chr5g0014131' => 'rch', 'RcHm_v2.0_Chr5g0033621' => 'rch', 'RcHm_v2.0_Chr6g0272041' => 'rch', 'RcHm_v2.0_Chr6g0278831' => 'rch', 'Rhsim02G0130400' => 'rsi', 'Rhsim02G0171100' => 'rsi', 'Rhsim05G0053000' => 'rsi', 'Rhsim05G0053100' => 'rsi', 'Rhsim06G0096500' => 'rsi', 'Rhsim06G0096600' => 'rsi', 'Rhsim06G0199100' => 'rsi', 'Rhsim12G0062300' => 'rsi', 'Rhsim12G0062800' => 'rsi', 'Sabra02G0118600' => 'sbr', 'Sabra04G0027300' => 'sbr', 'Sabra04G0119500' => 'sbr', 'Sabra08G0112500' => 'sbr', 'Sabra11G0036800' => 'sbr', 'Sabra11G0103800' => 'sbr', 'Sabra13G0096300' => 'sbr', 'Sabra16G0262300' => 'sbr', 'Sabra18G0091700' => 'sbr', 'Sabra19G0095400' => 'sbr', 'SalBow6G3080' => 'sbo', 'SalBow7G1157' => 'sbo', 'SalBow7G2123' => 'sbo', 'SalBow7G2285' => 'sbo', 'SalBow7G3537' => 'sbo', 'SalBow8G2947' => 'sbo', 'SalBow8G4463' => 'sbo', 'SalBow8G5466' => 'sbo', 'Sc01g0001750' => 'sci', 'Sc02g0006640' => 'sci', 'Sc02g0006670' => 'sci', 'Sc04g0008220' => 'sci', 'Sc05g0006190' => 'sci', 'Sc08g0002760' => 'sci', 'Sc17g0006170' => 'sci', 'Sc22g0002050' => 'sci', 'Sc23g0001190' => 'sci', 'Sc24g0000980' => 'sci', 'Sed0006245' => 'sed', 'Sed0007543' => 'sed', 'Sed0009411' => 'sed', 'Sed0010765' => 'sed', 'Sed0012944' => 'sed', 'Sed0014682' => 'sed', 'Sed0016174' => 'sed', 'Sed0016796' => 'sed', 'Sed0020317' => 'sed', 'Sed0021467' => 'sed', 'SEGI_01316' => 'sgi', 'SEGI_03374' => 'sgi', 'SEGI_16265' => 'sgi', 'SEGI_18569' => 'sgi', 'SEGI_20351' => 'sgi', 'SEGI_26395' => 'sgi', 'SEGI_29469' => 'sgi', 'SEGI_34771' => 'sgi', 'SEGI_36769' => 'sgi', 'SEGI_37139' => 'sgi', 'SGA_v2.0_scaffold100G29687' => 'sas', 'SGA_v2.0_scaffold118G32472' => 'sas', 'SGA_v2.0_scaffold14G07051' => 'sas', 'SGA_v2.0_scaffold183G39845' => 'sas', 'SGA_v2.0_scaffold1G00174' => 'sas', 'SGA_v2.0_scaffold22G09714' => 'sas', 'SGA_v2.0_scaffold333G48992' => 'sas', 'SGA_v2.0_scaffold46G17491' => 'sas', 'SGA_v2.0_scaffold49G18294' => 'sas', 'SGA_v2.0_scaffold63G21658' => 'sas', 'SHI01741' => 'shi', 'SHI05771' => 'shi', 'SHI18077' => 'shi', 'SHI20525' => 'shi', 'SHI20527' => 'shi', 'SHI20528' => 'shi', 'SMO172G0185' => 'smo', 'SMO198G0020' => 'smo', 'SMO351G0006' => 'smo', 'SMO356G0118' => 'smo', 'SMO358G0296' => 'smo', 'SMO367G0079' => 'smo', 'SMO367G1277' => 'smo', 'Solyc01g014220.3' => 'sly', 'Solyc01g111770.2' => 'sly', 'Solyc02g078180.3' => 'sly', 'Solyc03g006430.3' => 'sly', 'Solyc03g006456.1' => 'sly', 'Solyc03g079860.2' => 'sly', 'Solyc04g079770.3' => 'sly', 'Solyc05g007430.4' => 'sly', 'Solyc07g063150.3' => 'sly', 'Solyc08g016620.3' => 'sly', 'Solyc09g057590.3' => 'sly', 'Solyc09g057600.1' => 'sly', 'Solyc10g009050.3' => 'sly', 'Solyc11g017420.2' => 'sly', 'Sopen01g053810' => 'spe', 'Sopen02g023040' => 'spe', 'Sopen03g002440' => 'spe', 'Sopen04g033350' => 'spe', 'Sopen05g003310' => 'spe', 'Sopen07g004050' => 'spe', 'Sopen07g031340' => 'spe', 'Sopen08g006990' => 'spe', 'Sopen10g004830' => 'spe', 'Sopen11g009370' => 'spe', 'Sp1g24450' => 'spa', 'Sp1g29670' => 'spa', 'Sp1g39600' => 'spa', 'Sp2g11080' => 'spa', 'Sp2g13970' => 'spa', 'Sp4g16130' => 'spa', 'Sp6g13080' => 'spa', 'Sp7g37270' => 'spa', 'TAR371G0065' => 'tar', 'TAR376G0340' => 'tar', 'TAR376G0435' => 'tar', 'TAR381G0002' => 'tar', 'TAR381G1236' => 'tar', 'TAR624G0055' => 'tar', 'TAR624G0324' => 'tar', 'TAR624G0696' => 'tar', 'TAR624G0906' => 'tar', 'TAR625G0107' => 'tar', 'TAR626G0015' => 'tar', 'TAR626G1356' => 'tar', 'TAR627G0888' => 'tar', 'TAR628G0399' => 'tar', 'TAR628G1327' => 'tar', 'TAR629G2831' => 'tar', 'TAR629G2874' => 'tar', 'TAR633G1432' => 'tar', 'TAR633G2771' => 'tar', 'THA.LOC104803394' => 'tha', 'THA.LOC104805153' => 'tha', 'THA.LOC104806784' => 'tha', 'THA.LOC104810473' => 'tha', 'THA.LOC104813100' => 'tha', 'THA.LOC104814215' => 'tha', 'THA.LOC104815554' => 'tha', 'THA.LOC104820544' => 'tha', 'THA.LOC104824754' => 'tha', 'THA.LOC104827717' => 'tha', 'Thecc.02G031400' => 'tca', 'Thecc.02G055900' => 'tca', 'Thecc.02G350800' => 'tca', 'Thecc.06G150900' => 'tca', 'Thecc.06G186600' => 'tca', 'Thecc.07G089600' => 'tca', 'Thecc.08G020400' => 'tca', 'Thecc.08G182100' => 'tca', 'Thhalv10000873m.g' => 'esa', 'Thhalv10004185m.g' => 'esa', 'Thhalv10006981m.g' => 'esa', 'Thhalv10007204m.g' => 'esa', 'Thhalv10011374m.g' => 'esa', 'Thhalv10013482m.g' => 'esa', 'Thhalv10017801m.g' => 'esa', 'Thhalv10024983m.g' => 'esa', 'TPR.G12072' => 'tpr', 'TPR.G15769' => 'tpr', 'TPR.G16504' => 'tpr', 'TPR.G16506' => 'tpr', 'TPR.G24345' => 'tpr', 'TPR.G26666' => 'tpr', 'TPR.G27320' => 'tpr', 'TPR.G31819' => 'tpr', 'TPR.G38879' => 'tpr', 'TPR.G39015' => 'tpr', 'TPR.G8819' => 'tpr', 'TWI09G0924' => 'twi', 'TWI12G0811' => 'twi', 'TWI12G1294' => 'twi', 'TWI31G0150' => 'twi', 'TWI36G1262' => 'twi', 'TWI38G1287' => 'twi', 'TWI38G1633' => 'twi', 'TWI38G1982' => 'twi', 'TWI39G0116' => 'twi', 'TWI60G1011' => 'twi', 'TWI63G0171' => 'twi', 'TWI73G0839' => 'twi', 'TWI79G1511' => 'twi', 'unitig_0.g915' => 'ugi', 'unitig_0.g916' => 'ugi', 'unitig_21.g20219' => 'ugi', 'unitig_21.g20416' => 'ugi', 'unitig_578.g16132' => 'ugi', 'unitig_578.g16718' => 'ugi', 'unitig_62.g23481' => 'ugi', 'unitig_744.g24535' => 'ugi', 'unitig_749.g13525' => 'ugi', 'vmacro01248' => 'vma', 'vmacro02290' => 'vma', 'vmacro10946' => 'vma', 'vmacro11865' => 'vma', 'vmacro12493' => 'vma', 'vmacro17322' => 'vma', 'vmacro21599' => 'vma', 'vmacro23041' => 'vma', 'VMungo0251G0004' => 'vmu', 'VMungo0251G2639' => 'vmu', 'VMungo0251G2967' => 'vmu', 'VMungo0540G0864' => 'vmu', 'VMungo0540G1569' => 'vmu', 'VMungo0647G0317' => 'vmu', 'VMungo0720G1373' => 'vmu', 'VMungo0720G1508' => 'vmu', 'VMungo1080G0485' => 'vmu', 'VMungo1215G3177' => 'vmu', 'Zm00001eb112600' => 'zma', 'Zm00001eb120220' => 'zma', 'Zm00001eb153240' => 'zma', 'Zm00001eb168880' => 'zma', 'Zm00001eb213920' => 'zma', 'Zm00001eb228280' => 'zma', 'Zm00001eb254580' => 'zma', 'Zm00001eb272180' => 'zma', 'Zm00001eb293190' => 'zma', 'Zm00001eb322930' => 'zma', 'Zm00001eb353360' => 'zma', 'Zm00001eb353390' => 'zma', 'Zm00001eb353430' => 'zma', 'Zm00001eb353440' => 'zma', 'Zm00001eb353780' => 'zma' ), 'gf_id' => 'HOM05D000499', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000499' ), 'data_identifier' => 'HOM05D000499', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000499', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1066', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p29780' => 'bna', 'A02p33180' => 'bna', 'A03p16470' => 'bna', 'A03p66010' => 'bna', 'A04p25970' => 'bna', 'A06p01270' => 'bna', 'A06p46080' => 'bna', 'A07p11400' => 'bna', 'A08p01840' => 'bna', 'A08p08230' => 'bna', 'A08p25740' => 'bna', 'A09p32070' => 'bna', 'A09p37830' => 'bna', 'A09p42840' => 'bna', 'A09p42850' => 'bna', 'Aa31LG10G2060' => 'aar', 'Aa31LG2G7410' => 'aar', 'Aa31LG6G10200' => 'aar', 'Aa31LG6G16680' => 'aar', 'Aa31LG6G8470' => 'aar', 'Aa31LG9G12730' => 'aar', 'Aa31LG9G13680' => 'aar', 'Aa31LG9G14920' => 'aar', 'Aa31LG9G6650' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4977' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5467' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3254' => 'aag', 'Actinidia02578' => 'ach', 'Actinidia07693' => 'ach', 'Actinidia08413' => 'ach', 'Actinidia08414' => 'ach', 'Actinidia15289' => 'ach', 'Actinidia19871' => 'ach', 'Actinidia21475' => 'ach', 'Actinidia22576' => 'ach', 'Actinidia28327' => 'ach', 'Actinidia32491' => 'ach', 'Actinidia39463' => 'ach', 'Actinidia39571' => 'ach', 'Ah.01g013750' => 'amhyb', 'Ah.01g023210' => 'amhyb', 'Ah.04g164850' => 'amhyb', 'Ah.05g178060' => 'amhyb', 'Ah.07g204270' => 'amhyb', 'Ah.07g208480' => 'amhyb', 'Ah.09g237410' => 'amhyb', 'Ah.14g089460' => 'amhyb', 'AL1G41790' => 'aly', 'AL1G49050' => 'aly', 'AL1G53810' => 'aly', 'AL1G61400' => 'aly', 'AL4G18580' => 'aly', 'AL5G12510' => 'aly', 'AL5G12540' => 'aly', 'AL6G43230' => 'aly', 'AL7G10370' => 'aly', 'AL7G19250' => 'aly', 'AL8G12240' => 'aly', 'AL8G18540' => 'aly', 'Aqoxy1G02409' => 'aox', 'Aqoxy2G03993' => 'aox', 'Aqoxy3G03357' => 'aox', 'Aqoxy4G00785' => 'aox', 'Aqoxy5G02598' => 'aox', 'Aqoxy6G00132' => 'aox', 'Aqoxy7G01776' => 'aox', 'Aqoxy7G02316' => 'aox', 'Aqoxy7G03973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.12AFKW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B8730' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27IQR1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3F75VG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3RE0GA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41TCQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.527VTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FIR39' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5W8UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DA38EV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ63HS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H1I32C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HC27T5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4M8AP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7N3CZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9UVDZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LS1NQA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT1D4B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SKC4TM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCFV76' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF9Q1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQWD9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1ZM88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WE07RT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YCK7VH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJE6Q6' => 'arhy', 'AT1G28240' => 'ath', 'AT1G34550' => 'ath', 'AT1G53040' => 'ath', 'AT2G02910' => 'ath', 'AT4G09630' => 'ath', 'AT4G38500' => 'ath', 'AT5G42660' => 'ath', 'AT5G46220' => 'ath', 'ATR0152G026' => 'atr', 'ATR0564G343' => 'atr', 'ATR0706G151' => 'atr', 'ATR0733G207' => 'atr', 'ATR0751G234' => 'atr', 'ATR0807G048' => 'atr', 'ATR1091G084' => 'atr', 'Atru.chr10.1229' => 'acertr', 'Atru.chr10.1230' => 'acertr', 'Atru.chr10.1874' => 'acertr', 'Atru.chr11.1808' => 'acertr', 'Atru.chr13.1795' => 'acertr', 'Atru.chr13.570' => 'acertr', 'Atru.chr2.2608' => 'acertr', 'Atru.chr2.2609' => 'acertr', 'Atru.chr5.3428' => 'acertr', 'Atru.chr8.1171' => 'acertr', 'AUR62004651' => 'cqu', 'AUR62008675' => 'cqu', 'AUR62010014' => 'cqu', 'AUR62013004' => 'cqu', 'AUR62014825' => 'cqu', 'AUR62015015' => 'cqu', 'AUR62015151' => 'cqu', 'AUR62017020' => 'cqu', 'AUR62019422' => 'cqu', 'AUR62023570' => 'cqu', 'AUR62025571' => 'cqu', 'AUR62029098' => 'cqu', 'AUR62033863' => 'cqu', 'AUR62034296' => 'cqu', 'AUR62040075' => 'cqu', 'BcaB02g07334' => 'bca', 'BcaB02g10575' => 'bca', 'BcaB03g12119' => 'bca', 'BcaB03g12120' => 'bca', 'BcaB03g13945' => 'bca', 'BcaB04g17123' => 'bca', 'BcaB04g17867' => 'bca', 'BcaB04g19839' => 'bca', 'BcaB07g30317' => 'bca', 'BcaB07g32432' => 'bca', 'BcaB07g33362' => 'bca', 'BcaB08g36611' => 'bca', 'BcaC01g00028' => 'bca', 'BcaC01g01356' => 'bca', 'BcaC01g02034' => 'bca', 'BcaC01g06051' => 'bca', 'BcaC03g16839' => 'bca', 'BcaC03g17176' => 'bca', 'BcaC05g26829' => 'bca', 'BcaC06g31490' => 'bca', 'BcaC06g35344' => 'bca', 'BcaC06g36570' => 'bca', 'BcaC07g37537' => 'bca', 'BcaC08g43491' => 'bca', 'BcaC08g43773' => 'bca', 'BcaNung00234' => 'bca', 'BcaNung01982' => 'bca', 'BcaNung03707' => 'bca', 'BcaNung06454' => 'bca', 'BolC2t10762H' => 'bol', 'BolC2t11191H' => 'bol', 'BolC3t14322H' => 'bol', 'BolC3t19747H' => 'bol', 'BolC3t21425H' => 'bol', 'BolC4t27800H' => 'bol', 'BolC5t31423H' => 'bol', 'BolC6t35951H' => 'bol', 'BolC6t36282H' => 'bol', 'BolC7t40678H' => 'bol', 'BolC7t40679H' => 'bol', 'BolC7t42222H' => 'bol', 'BolC7t43492H' => 'bol', 'BolC7t46785H' => 'bol', 'BolC8t47853H' => 'bol', 'BolC9t56805H' => 'bol', 'BraA02t08000Z' => 'bra', 'BraA02t08341Z' => 'bra', 'BraA03t10936Z' => 'bra', 'BraA03t15657Z' => 'bra', 'BraA04t18100Z' => 'bra', 'BraA05t20523Z' => 'bra', 'BraA06t23353Z' => 'bra', 'BraA06t27473Z' => 'bra', 'BraA06t27769Z' => 'bra', 'BraA07t28928Z' => 'bra', 'BraA08t32236Z' => 'bra', 'BraA08t32841Z' => 'bra', 'BraA08t34524Z' => 'bra', 'BraA09t38742Z' => 'bra', 'BraA09t39295Z' => 'bra', 'C02p47180' => 'bna', 'C02p50990' => 'bna', 'C03p19360' => 'bna', 'C03p74950' => 'bna', 'C03p91000' => 'bna', 'C04p63260' => 'bna', 'C05p27050' => 'bna', 'C06p08750' => 'bna', 'C06p11490' => 'bna', 'C07p02820' => 'bna', 'C07p17180' => 'bna', 'C07p29440' => 'bna', 'C07p63730' => 'bna', 'C09p39260' => 'bna', 'CAN.G1164.34' => 'can', 'CAN.G1164.39' => 'can', 'CAN.G1530.3' => 'can', 'CAN.G162.61' => 'can', 'CAN.G176.6' => 'can', 'CAN.G289.49' => 'can', 'CAN.G370.21' => 'can', 'CAN.G370.22' => 'can', 'CAN.G371.117' => 'can', 'CAN.G58.37' => 'can', 'CAN.G588.98' => 'can', 'CANSAT21G2266' => 'cansat', 'CANSAT25G2799' => 'cansat', 'CANSAT35G0862' => 'cansat', 'CANSAT35G1704' => 'cansat', 'CANSAT35G1760' => 'cansat', 'CANSAT56G3971' => 'cansat', 'CANSAT56G4116' => 'cansat', 'CANSAT80G1259' => 'cansat', 'CARHR027730' => 'chi', 'CARHR033880' => 'chi', 'CARHR043270' => 'chi', 'CARHR145330' => 'chi', 'CARHR145340' => 'chi', 'CARHR175570' => 'chi', 'CARHR181570' => 'chi', 'CARHR258470' => 'chi', 'CARHR260490' => 'chi', 'CARHR294220' => 'chi', 'Carub.0001s2668' => 'cru', 'Carub.0001s3257' => 'cru', 'Carub.0001s4220' => 'cru', 'Carub.0005s0179' => 'cru', 'Carub.0006s2807' => 'cru', 'Carub.0007s0039' => 'cru', 'Carub.0008s0169' => 'cru', 'Carub.0008s0636' => 'cru', 'Ca_00338_v3' => 'car', 'Ca_00542_v3' => 'car', 'Ca_01844_v3' => 'car', 'Ca_10611_v3' => 'car', 'Ca_13326_v3' => 'car', 'Ca_17944_v3' => 'car', 'Ca_18546_v3' => 'car', 'Ca_24219_v3' => 'car', 'Ca_29972_v3' => 'car', 'CBR_g3681' => 'cbr', 'CBR_g40021' => 'cbr', 'Cc01_g08140' => 'ccan', 'Cc02_g13410' => 'ccan', 'Cc02_g37480' => 'ccan', 'Cc05_g12030' => 'ccan', 'Cc09_g03370' => 'ccan', 'Cc09_g10300' => 'ccan', 'Cc10_g03530' => 'ccan', 'Cc10_g11380' => 'ccan', 'CDE01G0176' => 'cde', 'CDE02G0675' => 'cde', 'CDE02G0942' => 'cde', 'CDE02G1153' => 'cde', 'CDE02G4177' => 'cde', 'CDE04G2117' => 'cde', 'CDE04G2736' => 'cde', 'CDE08G1161' => 'cde', 'CDE09G1238' => 'cde', 'Cfa000467' => 'cfa', 'Cfa000947' => 'cfa', 'Cfa004969' => 'cfa', 'Cfa005284' => 'cfa', 'Cfa008993' => 'cfa', 'Cfa018187' => 'cfa', 'Cfa018454' => 'cfa', 'Cfa020585' => 'cfa', 'Ciclev10000424m.g' => 'ccl', 'Ciclev10003605m.g' => 'ccl', 'Ciclev10007828m.g' => 'ccl', 'Ciclev10014620m.g' => 'ccl', 'Ciclev10015169m.g' => 'ccl', 'Ciclev10018291m.g' => 'ccl', 'Ciclev10028256m.g' => 'ccl', 'Ciclev10033822m.g' => 'ccl', 'CiPaw.05G060300' => 'cil', 'CiPaw.05G085000' => 'cil', 'CiPaw.06G083700' => 'cil', 'CiPaw.06G120300' => 'cil', 'CiPaw.09G060500' => 'cil', 'CiPaw.09G123800' => 'cil', 'CiPaw.11G169700' => 'cil', 'CiPaw.12G118300' => 'cil', 'CiPaw.15G071000' => 'cil', 'CiPaw.15G081900' => 'cil', 'ClCG01G024610' => 'cla', 'ClCG03G006070' => 'cla', 'ClCG05G019250' => 'cla', 'ClCG09G009500' => 'cla', 'ClCG11G008200' => 'cla', 'ClCG11G018080' => 'cla', 'COL.COLO4_17373' => 'col', 'COL.COLO4_22994' => 'col', 'COL.COLO4_26389' => 'col', 'COL.COLO4_27170' => 'col', 'COL.COLO4_31074' => 'col', 'COL.COLO4_31465' => 'col', 'COL.COLO4_36438' => 'col', 'COL.COLO4_36439' => 'col', 'Cpa.g.c38781' => 'cpa', 'Cpa.g.sc128.12' => 'cpa', 'Cpa.g.sc166.7' => 'cpa', 'Cpa.g.sc166.8' => 'cpa', 'Cpa.g.sc20.111' => 'cpa', 'Cpa.g.sc27.31' => 'cpa', 'Cpa.g.sc64.36' => 'cpa', 'Cpa.g.sc64.37' => 'cpa', 'Cpa.g.sc66.49' => 'cpa', 'Cpa.g.sc80.64' => 'cpa', 'CsaV3_1G012320' => 'csa', 'CsaV3_2G008480' => 'csa', 'CsaV3_2G033450' => 'csa', 'CsaV3_3G044830' => 'csa', 'CsaV3_4G033710' => 'csa', 'CsaV3_6G051730' => 'csa', 'CsaV3_7G025350' => 'csa', 'CSS0001067' => 'camsi', 'CSS0005996' => 'camsi', 'CSS0006590' => 'camsi', 'CSS0009673' => 'camsi', 'CSS0010201' => 'camsi', 'CSS0010549' => 'camsi', 'CSS0011364' => 'camsi', 'CSS0014473' => 'camsi', 'CSS0014961' => 'camsi', 'CSS0020191' => 'camsi', 'CSS0021165' => 'camsi', 'CSS0022306' => 'camsi', 'CSS0030591' => 'camsi', 'CSS0030696' => 'camsi', 'CSS0032653' => 'camsi', 'CSS0037487' => 'camsi', 'CSS0041102' => 'camsi', 'CSS0041261' => 'camsi', 'CSS0046246' => 'camsi', 'CSS0049256' => 'camsi', 'DCAR_004075' => 'dca', 'DCAR_011538' => 'dca', 'DCAR_019553' => 'dca', 'DCAR_020952' => 'dca', 'DCAR_021739' => 'dca', 'DCAR_027407' => 'dca', 'DCAR_027913' => 'dca', 'DCAR_028066' => 'dca', 'Dinv05899' => 'din', 'Dinv07563' => 'din', 'Dinv08010' => 'din', 'Dinv14125' => 'din', 'Dinv20172' => 'din', 'Dinv30743' => 'din', 'Dinv31229' => 'din', 'Dinv34162' => 'din', 'Dinv36028' => 'din', 'Dinv39368' => 'din', 'Dinv40565' => 'din', 'Dinv41706' => 'din', 'Duzib052G0089' => 'dzi', 'Duzib116G0641' => 'dzi', 'Duzib132G0069' => 'dzi', 'Duzib132G1219' => 'dzi', 'Duzib147G0278' => 'dzi', 'Duzib160G0480' => 'dzi', 'Duzib170G0661' => 'dzi', 'Duzib177G0591' => 'dzi', 'Duzib187G1353' => 'dzi', 'Duzib192G0858' => 'dzi', 'Duzib192G0883' => 'dzi', 'Duzib213G0506' => 'dzi', 'Duzib235G0289' => 'dzi', 'Duzib251G0422' => 'dzi', 'ECA232G3898' => 'eca', 'ECA233G5950' => 'eca', 'ECA234G1699' => 'eca', 'ECA234G2421' => 'eca', 'ECA236G0426' => 'eca', 'ECA236G4331' => 'eca', 'ECA248G2573' => 'eca', 'EL10Ac1g00077' => 'bvu', 'EL10Ac1g01746' => 'bvu', 'EL10Ac2g03464' => 'bvu', 'EL10Ac4g08176' => 'bvu', 'EL10Ac7g17521' => 'bvu', 'EL10Ac8g20386' => 'bvu', 'EL10Ac9g21343' => 'bvu', 'EL10Ac9g22688' => 'bvu', 'Eucgr.B03434' => 'egr', 'Eucgr.D00618' => 'egr', 'Eucgr.E02395' => 'egr', 'Eucgr.F01129' => 'egr', 'Eucgr.F02622' => 'egr', 'Eucgr.F04207' => 'egr', 'FAN01G0570' => 'fan', 'FAN03G3351' => 'fan', 'FAN06G3702' => 'fan', 'FAN07G2149' => 'fan', 'FAN10G3758' => 'fan', 'FAN11G1170' => 'fan', 'FAN11G2050' => 'fan', 'FAN11G2724' => 'fan', 'FAN12G1700' => 'fan', 'FAN12G2028' => 'fan', 'FAN15G1160' => 'fan', 'FAN15G3063' => 'fan', 'FAN16G2540' => 'fan', 'FAN16G3077' => 'fan', 'FAN16G3624' => 'fan', 'FAN17G0221' => 'fan', 'FAN20G2492' => 'fan', 'FAN20G2905' => 'fan', 'FAN21G0548' => 'fan', 'FAN21G1300' => 'fan', 'FAN22G0077' => 'fan', 'FAN22G1315' => 'fan', 'FAN24G1280' => 'fan', 'FAN24G1445' => 'fan', 'FAN24G3527' => 'fan', 'FAN25G0464' => 'fan', 'FAN25G2885' => 'fan', 'FAN25G3270' => 'fan', 'FAN27G1101' => 'fan', 'FAN27G2846' => 'fan', 'FAN27G3524' => 'fan', 'FvH4_2g11770' => 'fve', 'FvH4_2g15630' => 'fve', 'FvH4_3g05570' => 'fve', 'FvH4_3g09110' => 'fve', 'FvH4_3g19940' => 'fve', 'FvH4_4g04821' => 'fve', 'FvH4_4g31480' => 'fve', 'FvH4_7g01740' => 'fve', 'Glyma.05G130400' => 'gma', 'Glyma.05G156400' => 'gma', 'Glyma.07G197000' => 'gma', 'Glyma.08G085151' => 'gma', 'Glyma.08G114500' => 'gma', 'Glyma.08G300400' => 'gma', 'Glyma.10G215800' => 'gma', 'Glyma.12G224400' => 'gma', 'Glyma.13G179300' => 'gma', 'Glyma.13G218151' => 'gma', 'Glyma.13G238800' => 'gma', 'Glyma.13G276900' => 'gma', 'Glyma.14G078200' => 'gma', 'Glyma.15G074500' => 'gma', 'Glyma.15G094100' => 'gma', 'Glyma.17G247200' => 'gma', 'Glyma.18G120100' => 'gma', 'Glyma.20G176000' => 'gma', 'Gohir.A01G063600' => 'ghi', 'Gohir.A01G170301' => 'ghi', 'Gohir.A02G060500' => 'ghi', 'Gohir.A05G133850' => 'ghi', 'Gohir.A05G161400' => 'ghi', 'Gohir.A06G012900' => 'ghi', 'Gohir.A06G035901' => 'ghi', 'Gohir.A06G127100' => 'ghi', 'Gohir.A06G210500' => 'ghi', 'Gohir.A08G008650' => 'ghi', 'Gohir.A09G072700' => 'ghi', 'Gohir.A09G088301' => 'ghi', 'Gohir.A10G040600' => 'ghi', 'Gohir.A12G036300' => 'ghi', 'Gohir.A12G143350' => 'ghi', 'Gohir.A12G165500' => 'ghi', 'Gohir.A13G145700' => 'ghi', 'Gohir.D01G050000' => 'ghi', 'Gohir.D01G051366' => 'ghi', 'Gohir.D01G161350' => 'ghi', 'Gohir.D02G065900' => 'ghi', 'Gohir.D05G164200' => 'ghi', 'Gohir.D05G355500' => 'ghi', 'Gohir.D06G010400' => 'ghi', 'Gohir.D06G111250' => 'ghi', 'Gohir.D06G132000' => 'ghi', 'Gohir.D06G210500' => 'ghi', 'Gohir.D07G165675' => 'ghi', 'Gohir.D08G062240' => 'ghi', 'Gohir.D08G086101' => 'ghi', 'Gohir.D08G138060' => 'ghi', 'Gohir.D09G072300' => 'ghi', 'Gohir.D10G041400' => 'ghi', 'Gohir.D11G191020' => 'ghi', 'Gohir.D11G212066' => 'ghi', 'Gohir.D12G036300' => 'ghi', 'Gohir.D12G168600' => 'ghi', 'Gohir.D13G150600' => 'ghi', 'Gorai.001G057300' => 'gra', 'Gorai.002G069900' => 'gra', 'Gorai.002G200000' => 'gra', 'Gorai.003G067600' => 'gra', 'Gorai.005G074800' => 'gra', 'Gorai.006G087300' => 'gra', 'Gorai.008G037500' => 'gra', 'Gorai.008G181400' => 'gra', 'Gorai.009G169400' => 'gra', 'Gorai.009G387900' => 'gra', 'Gorai.010G013300' => 'gra', 'Gorai.010G153800' => 'gra', 'Gorai.010G255800' => 'gra', 'Gorai.011G043700' => 'gra', 'Gorai.011G198900' => 'gra', 'Gorai.013G168400' => 'gra', 'GSVIVG01005212001' => 'vvi', 'GSVIVG01006163001' => 'vvi', 'GSVIVG01009625001' => 'vvi', 'GSVIVG01014338001' => 'vvi', 'GSVIVG01020005001' => 'vvi', 'GSVIVG01021450001' => 'vvi', 'GSVIVG01023975001' => 'vvi', 'GSVIVG01034490001' => 'vvi', 'HanXRQChr04g0112071' => 'han', 'HanXRQChr05g0131151' => 'han', 'HanXRQChr09g0262371' => 'han', 'HanXRQChr09g0268401' => 'han', 'HanXRQChr10g0279241' => 'han', 'HanXRQChr10g0297961' => 'han', 'HanXRQChr11g0326231' => 'han', 'HanXRQChr11g0328471' => 'han', 'HanXRQChr16g0507941' => 'han', 'HanXRQChr17g0560211' => 'han', 'Haze_02108' => 'cav', 'Haze_02428' => 'cav', 'Haze_05593' => 'cav', 'Haze_06448' => 'cav', 'Haze_09427' => 'cav', 'Haze_12022' => 'cav', 'Haze_17612' => 'cav', 'Haze_17928' => 'cav', 'Hma1.2p1_0032F.1_g019250' => 'hma', 'Hma1.2p1_0163F.1_g072690' => 'hma', 'Hma1.2p1_0265F.1_g106710' => 'hma', 'Hma1.2p1_0286F.1_g113970' => 'hma', 'Hma1.2p1_0363F.1_g136640' => 'hma', 'Hma1.2p1_0584F.1_g183470' => 'hma', 'Hma1.2p1_0885F.1_g232570' => 'hma', 'HPP92_006022' => 'vpl', 'HPP92_007320' => 'vpl', 'HPP92_011521' => 'vpl', 'HPP92_019387' => 'vpl', 'HPP92_024038' => 'vpl', 'Hund05891' => 'sun', 'Hund06450' => 'sun', 'Hund12053' => 'sun', 'Hund16800' => 'sun', 'Hund21222' => 'sun', 'Hund22896' => 'sun', 'Hund23746' => 'sun', 'Hund27083' => 'sun', 'Lalb_Chr02g0141831' => 'lal', 'Lalb_Chr02g0141841' => 'lal', 'Lalb_Chr05g0220411' => 'lal', 'Lalb_Chr06g0162081' => 'lal', 'Lalb_Chr09g0327651' => 'lal', 'Lalb_Chr13g0295051' => 'lal', 'Lalb_Chr15g0086801' => 'lal', 'Lalb_Chr16g0383781' => 'lal', 'Lalb_Chr16g0383791' => 'lal', 'Lalb_Chr18g0055441' => 'lal', 'Lalb_Chr18g0059611' => 'lal', 'Lalb_Chr20g0109661' => 'lal', 'Lalb_Chr20g0109831' => 'lal', 'Lalb_Chr20g0121871' => 'lal', 'Lalb_Chr22g0355361' => 'lal', 'Lalb_Chr25g0286371' => 'lal', 'Lj1A1187G43' => 'lonja', 'Lj1A1205T50' => 'lonja', 'Lj1A800G33' => 'lonja', 'Lj1C1187T7' => 'lonja', 'Lj1C843T11' => 'lonja', 'Lj1g0010940' => 'lja', 'Lj2A288T69' => 'lonja', 'Lj3g0024276' => 'lja', 'Lj4A47T76' => 'lonja', 'Lj4g0005805' => 'lja', 'Lj4g0006097' => 'lja', 'Lj4g0008528' => 'lja', 'Lj4g0024907' => 'lja', 'Lj5g0012472' => 'lja', 'Lj5g0018648' => 'lja', 'Lj6C789G1' => 'lonja', 'Lj6g0004000' => 'lja', 'Lj7A292G67' => 'lonja', 'Lj7A292T64' => 'lonja', 'Lj9A400T58' => 'lonja', 'Lsat_1_v5_gn_1_126181' => 'lsa', 'Lsat_1_v5_gn_4_123041' => 'lsa', 'Lsat_1_v5_gn_4_133620' => 'lsa', 'Lsat_1_v5_gn_4_53221' => 'lsa', 'Lsat_1_v5_gn_4_71961' => 'lsa', 'Lsat_1_v5_gn_7_105241' => 'lsa', 'Lsat_1_v5_gn_7_21361' => 'lsa', 'Lsat_1_v5_gn_7_28860' => 'lsa', 'Lsat_1_v5_gn_7_31260' => 'lsa', 'Lsat_1_v5_gn_8_52801' => 'lsa', 'Manes.02G191400' => 'mes', 'Manes.03G110100' => 'mes', 'Manes.04G071100' => 'mes', 'Manes.05G100500' => 'mes', 'Manes.05G164700' => 'mes', 'Manes.15G087000' => 'mes', 'Manes.15G121500' => 'mes', 'Manes.16G028300' => 'mes', 'Manes.17G046100' => 'mes', 'Manes.17G069800' => 'mes', 'Manes.18G100500' => 'mes', 'Mapoly0002s0109' => 'mpo', 'Mapoly0024s0007' => 'mpo', 'Mapoly0089s0032' => 'mpo', 'MBI04_g42241_MAGBIO' => 'mbi', 'MBI05_g11988_MAGBIO' => 'mbi', 'MBI05_g35452_MAGBIO' => 'mbi', 'MBI07_g30179_MAGBIO' => 'mbi', 'MBI07_g35859_MAGBIO' => 'mbi', 'MBI07_g35860_MAGBIO' => 'mbi', 'MBI07_g37166_MAGBIO' => 'mbi', 'MBI08_g18172_MAGBIO' => 'mbi', 'MBI09_g08441_MAGBIO' => 'mbi', 'MBI13_g01676_MAGBIO' => 'mbi', 'MBI14_g42955_MAGBIO' => 'mbi', 'MBI16_g13161_MAGBIO' => 'mbi', 'MBI17_g27204_MAGBIO' => 'mbi', 'MBI19_g21595_MAGBIO' => 'mbi', 'MD00G1148400' => 'mdo', 'MD02G1301200' => 'mdo', 'MD03G1227800' => 'mdo', 'MD05G1041100' => 'mdo', 'MD05G1124800' => 'mdo', 'MD05G1284000' => 'mdo', 'MD05G1338800' => 'mdo', 'MD05G1338900' => 'mdo', 'MD07G1022800' => 'mdo', 'MD10G1047500' => 'mdo', 'MD10G1127500' => 'mdo', 'MD10G1262300' => 'mdo', 'MD10G1293800' => 'mdo', 'MD16G1074300' => 'mdo', 'Medtr1g021670' => 'mtr', 'Medtr1g096320' => 'mtr', 'Medtr2g013690' => 'mtr', 'Medtr2g019450' => 'mtr', 'Medtr2g085170' => 'mtr', 'Medtr4g088785' => 'mtr', 'Medtr8g055930' => 'mtr', 'Medtr8g085850' => 'mtr', 'MELO3C002605.2' => 'cme', 'MELO3C003891.2' => 'cme', 'MELO3C004012.2' => 'cme', 'MELO3C007134.2' => 'cme', 'MELO3C008118.2' => 'cme', 'MELO3C016700.2' => 'cme', 'MELO3C024127.2' => 'cme', 'MELO3C033361.2' => 'cme', 'MELO3C033362.2' => 'cme', 'Migut.C00430' => 'egut', 'Migut.C01246' => 'egut', 'Migut.E00101' => 'egut', 'Migut.H01486' => 'egut', 'Migut.H01939' => 'egut', 'Migut.K00360' => 'egut', 'Migut.M00910' => 'egut', 'Migut.M01139' => 'egut', 'Migut.N02677' => 'egut', 'MSTRG.13252' => 'ama', 'MSTRG.14701' => 'ama', 'MSTRG.1521' => 'ama', 'MSTRG.15884' => 'ama', 'MSTRG.16242' => 'ama', 'MSTRG.22285' => 'ama', 'MSTRG.22444' => 'ama', 'MSTRG.2349' => 'ama', 'MSTRG.26308' => 'ama', 'MSTRG.28296' => 'ama', 'MSTRG.9895' => 'ama', 'Nitab4.5_0000110g0060' => 'nta', 'Nitab4.5_0000420g0130' => 'nta', 'Nitab4.5_0000422g0030' => 'nta', 'Nitab4.5_0000560g0180' => 'nta', 'Nitab4.5_0000703g0100' => 'nta', 'Nitab4.5_0000786g0200' => 'nta', 'Nitab4.5_0001336g0020' => 'nta', 'Nitab4.5_0001796g0030' => 'nta', 'Nitab4.5_0003348g0060' => 'nta', 'Nitab4.5_0003698g0040' => 'nta', 'Nitab4.5_0003942g0090' => 'nta', 'Nitab4.5_0004775g0070' => 'nta', 'Nitab4.5_0004864g0030' => 'nta', 'Nitab4.5_0005615g0020' => 'nta', 'Nitab4.5_0009288g0030' => 'nta', 'Nitab4.5_0009341g0010' => 'nta', 'Nitab4.5_0009535g0010' => 'nta', 'Nn1g03995' => 'nnu', 'Nn1g04100' => 'nnu', 'Nn1g06530' => 'nnu', 'Nn3g16404' => 'nnu', 'Nn3g17212' => 'nnu', 'Nn3g20776' => 'nnu', 'Nn3g21923' => 'nnu', 'Nn5g27737' => 'nnu', 'Nn5g29461' => 'nnu', 'Nn7g38355' => 'nnu', 'Nn8g39873' => 'nnu', 'Oeu000548.2' => 'oeu', 'Oeu004672.1' => 'oeu', 'Oeu015605.2' => 'oeu', 'Oeu016092.1' => 'oeu', 'Oeu017879.3' => 'oeu', 'Oeu024910.1' => 'oeu', 'Oeu028965.1' => 'oeu', 'Oeu031269.1' => 'oeu', 'Oeu031270.1' => 'oeu', 'Oeu032535.1' => 'oeu', 'Oeu034151.1' => 'oeu', 'Oeu034152.1' => 'oeu', 'Oeu034588.2' => 'oeu', 'Oeu050846.1' => 'oeu', 'Oeu050849.2' => 'oeu', 'Oeu051063.2' => 'oeu', 'Oeu052368.1' => 'oeu', 'Oeu052370.1' => 'oeu', 'Os01g0210400' => 'osa', 'Os01g0304300' => 'osa', 'Os01g0749100' => 'osa', 'Os02g0745800' => 'osa', 'Os03g0769050' => 'osa', 'Os05g0531500' => 'osa', 'Os06g0724300' => 'osa', 'Os11g0198100' => 'osa', 'Peaxi162Scf00069g01425' => 'pax', 'Peaxi162Scf00280g00811' => 'pax', 'Peaxi162Scf00310g00615' => 'pax', 'Peaxi162Scf00362g00542' => 'pax', 'Peaxi162Scf00461g00310' => 'pax', 'Peaxi162Scf00530g00118' => 'pax', 'Peaxi162Scf00541g00057' => 'pax', 'Peaxi162Scf00661g00017' => 'pax', 'Peaxi162Scf00926g00027' => 'pax', 'Peaxi162Scf01064g00263' => 'pax', 'Peaxi162Scf01211g00135' => 'pax', 'PGR004G2336' => 'pgr', 'PGR042G0327' => 'pgr', 'PGR042G1957' => 'pgr', 'PGR042G2003' => 'pgr', 'PGR042G3929' => 'pgr', 'PGR083G1137' => 'pgr', 'PGR083G1364' => 'pgr', 'PGSC0003DMG400003381' => 'stu', 'PGSC0003DMG400003417' => 'stu', 'PGSC0003DMG400008981' => 'stu', 'PGSC0003DMG400012417' => 'stu', 'PGSC0003DMG400012823' => 'stu', 'PGSC0003DMG400016885' => 'stu', 'PGSC0003DMG400022812' => 'stu', 'PGSC0003DMG400029726' => 'stu', 'PGSC0003DMG401009243' => 'stu', 'PGSC0003DMG401031505' => 'stu', 'PGSC0003DMG402031505' => 'stu', 'Phvul.001G017600' => 'pvu', 'Phvul.002G193500' => 'pvu', 'Phvul.002G228900' => 'pvu', 'Phvul.002G236800' => 'pvu', 'Phvul.003G049500' => 'pvu', 'Phvul.005G072000' => 'pvu', 'Phvul.006G164800' => 'pvu', 'Phvul.006G185100' => 'pvu', 'Phvul.007G090000' => 'pvu', 'Potri.001G399800' => 'ptr', 'Potri.002G149900' => 'ptr', 'Potri.004G044100' => 'ptr', 'Potri.004G177600' => 'ptr', 'Potri.009G138000' => 'ptr', 'Potri.010G094000' => 'ptr', 'Potri.011G053000' => 'ptr', 'Potri.011G119300' => 'ptr', 'Potri.013G113700' => 'ptr', 'Potri.018G107800' => 'ptr', 'Potri.019G084100' => 'ptr', 'Pp3c14_23720' => 'ppa', 'Pp3c16_6340' => 'ppa', 'Pp3c23_13420' => 'ppa', 'Pp3c24_2740' => 'ppa', 'Pp3c25_860' => 'ppa', 'Pp3c8_21750' => 'ppa', 'Prupe.1G273000' => 'ppe', 'Prupe.1G273700' => 'ppe', 'Prupe.1G274100' => 'ppe', 'Prupe.2G023300' => 'ppe', 'Prupe.4G048000' => 'ppe', 'Prupe.4G080400' => 'ppe', 'Prupe.4G181200' => 'ppe', 'Prupe.8G056900' => 'ppe', 'Prupe.8G168700' => 'ppe', 'Psat1g189080' => 'psa', 'Psat1g204760' => 'psa', 'Psat4g175560' => 'psa', 'Psat4g177720' => 'psa', 'Psat5g244240' => 'psa', 'Psat6g010720' => 'psa', 'Psat6g187200' => 'psa', 'Psat7g072040' => 'psa', 'PSO017G3501' => 'pso', 'PSO063G2148' => 'pso', 'PSO063G5608' => 'pso', 'PSO210G6392' => 'pso', 'PSO541G2319' => 'pso', 'PSO541G2836' => 'pso', 'PSO541G4012' => 'pso', 'PSO541G6253' => 'pso', 'PSO675G0580' => 'pso', 'PSO675G0856' => 'pso', 'PSO675G5635' => 'pso', 'PSO675G9157' => 'pso', 'PSO832G1660' => 'pso', 'PSO832G1969' => 'pso', 'QL02p007186' => 'qlo', 'QL02p033904' => 'qlo', 'QL03p064391' => 'qlo', 'QL05p040593' => 'qlo', 'QL05p058242' => 'qlo', 'QL08p021825' => 'qlo', 'QL11p004981' => 'qlo', 'RcHm_v2.0_Chr1g0318301' => 'rch', 'RcHm_v2.0_Chr4g0418501' => 'rch', 'RcHm_v2.0_Chr4g0439971' => 'rch', 'RcHm_v2.0_Chr5g0008541' => 'rch', 'RcHm_v2.0_Chr5g0014101' => 'rch', 'RcHm_v2.0_Chr5g0014131' => 'rch', 'RcHm_v2.0_Chr5g0033621' => 'rch', 'RcHm_v2.0_Chr6g0272041' => 'rch', 'RcHm_v2.0_Chr6g0278831' => 'rch', 'Rhsim02G0130400' => 'rsi', 'Rhsim02G0171100' => 'rsi', 'Rhsim05G0053000' => 'rsi', 'Rhsim05G0053100' => 'rsi', 'Rhsim06G0096500' => 'rsi', 'Rhsim06G0096600' => 'rsi', 'Rhsim06G0199100' => 'rsi', 'Rhsim12G0062300' => 'rsi', 'Rhsim12G0062800' => 'rsi', 'Sabra02G0118600' => 'sbr', 'Sabra04G0027300' => 'sbr', 'Sabra04G0119500' => 'sbr', 'Sabra08G0112500' => 'sbr', 'Sabra11G0036800' => 'sbr', 'Sabra11G0103800' => 'sbr', 'Sabra13G0096300' => 'sbr', 'Sabra16G0262300' => 'sbr', 'Sabra18G0091700' => 'sbr', 'Sabra19G0095400' => 'sbr', 'SalBow6G3080' => 'sbo', 'SalBow7G1157' => 'sbo', 'SalBow7G2123' => 'sbo', 'SalBow7G2285' => 'sbo', 'SalBow7G3537' => 'sbo', 'SalBow8G2947' => 'sbo', 'SalBow8G4463' => 'sbo', 'SalBow8G5466' => 'sbo', 'Sc01g0001750' => 'sci', 'Sc02g0006640' => 'sci', 'Sc02g0006670' => 'sci', 'Sc04g0008220' => 'sci', 'Sc05g0006190' => 'sci', 'Sc08g0002760' => 'sci', 'Sc17g0006170' => 'sci', 'Sc22g0002050' => 'sci', 'Sc23g0001190' => 'sci', 'Sc24g0000980' => 'sci', 'Sed0006245' => 'sed', 'Sed0007543' => 'sed', 'Sed0009411' => 'sed', 'Sed0010765' => 'sed', 'Sed0012944' => 'sed', 'Sed0014682' => 'sed', 'Sed0016174' => 'sed', 'Sed0016796' => 'sed', 'Sed0020317' => 'sed', 'Sed0021467' => 'sed', 'SEGI_01316' => 'sgi', 'SEGI_03374' => 'sgi', 'SEGI_16265' => 'sgi', 'SEGI_18569' => 'sgi', 'SEGI_20351' => 'sgi', 'SEGI_26395' => 'sgi', 'SEGI_29469' => 'sgi', 'SEGI_34771' => 'sgi', 'SEGI_36769' => 'sgi', 'SEGI_37139' => 'sgi', 'SGA_v2.0_scaffold100G29687' => 'sas', 'SGA_v2.0_scaffold118G32472' => 'sas', 'SGA_v2.0_scaffold14G07051' => 'sas', 'SGA_v2.0_scaffold183G39845' => 'sas', 'SGA_v2.0_scaffold1G00174' => 'sas', 'SGA_v2.0_scaffold22G09714' => 'sas', 'SGA_v2.0_scaffold333G48992' => 'sas', 'SGA_v2.0_scaffold46G17491' => 'sas', 'SGA_v2.0_scaffold49G18294' => 'sas', 'SGA_v2.0_scaffold63G21658' => 'sas', 'SHI01741' => 'shi', 'SHI05771' => 'shi', 'SHI18077' => 'shi', 'SHI20525' => 'shi', 'SHI20527' => 'shi', 'SHI20528' => 'shi', 'SMO172G0185' => 'smo', 'SMO198G0020' => 'smo', 'SMO351G0006' => 'smo', 'SMO356G0118' => 'smo', 'SMO358G0296' => 'smo', 'SMO367G0079' => 'smo', 'SMO367G1277' => 'smo', 'Solyc01g014220.3' => 'sly', 'Solyc01g111770.2' => 'sly', 'Solyc02g078180.3' => 'sly', 'Solyc03g006430.3' => 'sly', 'Solyc03g006456.1' => 'sly', 'Solyc03g079860.2' => 'sly', 'Solyc04g079770.3' => 'sly', 'Solyc05g007430.4' => 'sly', 'Solyc07g063150.3' => 'sly', 'Solyc08g016620.3' => 'sly', 'Solyc09g057590.3' => 'sly', 'Solyc09g057600.1' => 'sly', 'Solyc10g009050.3' => 'sly', 'Solyc11g017420.2' => 'sly', 'Sopen01g053810' => 'spe', 'Sopen02g023040' => 'spe', 'Sopen03g002440' => 'spe', 'Sopen04g033350' => 'spe', 'Sopen05g003310' => 'spe', 'Sopen07g004050' => 'spe', 'Sopen07g031340' => 'spe', 'Sopen08g006990' => 'spe', 'Sopen10g004830' => 'spe', 'Sopen11g009370' => 'spe', 'Sp1g24450' => 'spa', 'Sp1g29670' => 'spa', 'Sp1g39600' => 'spa', 'Sp2g11080' => 'spa', 'Sp2g13970' => 'spa', 'Sp4g16130' => 'spa', 'Sp6g13080' => 'spa', 'Sp7g37270' => 'spa', 'TAR371G0065' => 'tar', 'TAR376G0340' => 'tar', 'TAR376G0435' => 'tar', 'TAR381G0002' => 'tar', 'TAR381G1236' => 'tar', 'TAR624G0055' => 'tar', 'TAR624G0324' => 'tar', 'TAR624G0696' => 'tar', 'TAR624G0906' => 'tar', 'TAR625G0107' => 'tar', 'TAR626G0015' => 'tar', 'TAR626G1356' => 'tar', 'TAR627G0888' => 'tar', 'TAR628G0399' => 'tar', 'TAR628G1327' => 'tar', 'TAR629G2831' => 'tar', 'TAR629G2874' => 'tar', 'TAR633G1432' => 'tar', 'TAR633G2771' => 'tar', 'THA.LOC104803394' => 'tha', 'THA.LOC104805153' => 'tha', 'THA.LOC104806784' => 'tha', 'THA.LOC104810473' => 'tha', 'THA.LOC104813100' => 'tha', 'THA.LOC104814215' => 'tha', 'THA.LOC104815554' => 'tha', 'THA.LOC104820544' => 'tha', 'THA.LOC104824754' => 'tha', 'THA.LOC104827717' => 'tha', 'Thecc.02G031400' => 'tca', 'Thecc.02G055900' => 'tca', 'Thecc.02G350800' => 'tca', 'Thecc.06G150900' => 'tca', 'Thecc.06G186600' => 'tca', 'Thecc.07G089600' => 'tca', 'Thecc.08G020400' => 'tca', 'Thecc.08G182100' => 'tca', 'Thhalv10000873m.g' => 'esa', 'Thhalv10004185m.g' => 'esa', 'Thhalv10006981m.g' => 'esa', 'Thhalv10007204m.g' => 'esa', 'Thhalv10011374m.g' => 'esa', 'Thhalv10013482m.g' => 'esa', 'Thhalv10017801m.g' => 'esa', 'Thhalv10024983m.g' => 'esa', 'TPR.G12072' => 'tpr', 'TPR.G15769' => 'tpr', 'TPR.G16504' => 'tpr', 'TPR.G16506' => 'tpr', 'TPR.G24345' => 'tpr', 'TPR.G26666' => 'tpr', 'TPR.G27320' => 'tpr', 'TPR.G31819' => 'tpr', 'TPR.G38879' => 'tpr', 'TPR.G39015' => 'tpr', 'TPR.G8819' => 'tpr', 'TWI09G0924' => 'twi', 'TWI12G0811' => 'twi', 'TWI12G1294' => 'twi', 'TWI31G0150' => 'twi', 'TWI36G1262' => 'twi', 'TWI38G1287' => 'twi', 'TWI38G1633' => 'twi', 'TWI38G1982' => 'twi', 'TWI39G0116' => 'twi', 'TWI60G1011' => 'twi', 'TWI63G0171' => 'twi', 'TWI73G0839' => 'twi', 'TWI79G1511' => 'twi', 'unitig_0.g915' => 'ugi', 'unitig_0.g916' => 'ugi', 'unitig_21.g20219' => 'ugi', 'unitig_21.g20416' => 'ugi', 'unitig_578.g16132' => 'ugi', 'unitig_578.g16718' => 'ugi', 'unitig_62.g23481' => 'ugi', 'unitig_744.g24535' => 'ugi', 'unitig_749.g13525' => 'ugi', 'vmacro01248' => 'vma', 'vmacro02290' => 'vma', 'vmacro10946' => 'vma', 'vmacro11865' => 'vma', 'vmacro12493' => 'vma', 'vmacro17322' => 'vma', 'vmacro21599' => 'vma', 'vmacro23041' => 'vma', 'VMungo0251G0004' => 'vmu', 'VMungo0251G2639' => 'vmu', 'VMungo0251G2967' => 'vmu', 'VMungo0540G0864' => 'vmu', 'VMungo0540G1569' => 'vmu', 'VMungo0647G0317' => 'vmu', 'VMungo0720G1373' => 'vmu', 'VMungo0720G1508' => 'vmu', 'VMungo1080G0485' => 'vmu', 'VMungo1215G3177' => 'vmu', 'Zm00001eb112600' => 'zma', 'Zm00001eb120220' => 'zma', 'Zm00001eb153240' => 'zma', 'Zm00001eb168880' => 'zma', 'Zm00001eb213920' => 'zma', 'Zm00001eb228280' => 'zma', 'Zm00001eb254580' => 'zma', 'Zm00001eb272180' => 'zma', 'Zm00001eb293190' => 'zma', 'Zm00001eb322930' => 'zma', 'Zm00001eb353360' => 'zma', 'Zm00001eb353390' => 'zma', 'Zm00001eb353430' => 'zma', 'Zm00001eb353440' => 'zma', 'Zm00001eb353780' => 'zma' ) $gf_id = 'HOM05D000499' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000499' ) $data_identifier = 'HOM05D000499' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 29, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 12, 'amhyb' => (int) 8, 'aly' => (int) 12, 'aox' => (int) 9, 'arhy' => (int) 26, 'ath' => (int) 8, 'atr' => (int) 7, 'acertr' => (int) 10, 'cqu' => (int) 15, 'bca' => (int) 29, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 11, 'cansat' => (int) 8, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 9, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 8, 'cpa' => (int) 10, 'csa' => (int) 7, 'camsi' => (int) 20, 'dca' => (int) 8, 'din' => (int) 12, 'dzi' => (int) 14, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 6, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 38, 'gra' => (int) 16, 'vvi' => (int) 8, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 5, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 11, 'lja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 11, 'mpo' => (int) 3, 'mbi' => (int) 14, 'mdo' => (int) 14, 'mtr' => (int) 8, 'cme' => (int) 9, 'egut' => (int) 9, 'ama' => (int) 11, 'nta' => (int) 17, 'nnu' => (int) 11, 'oeu' => (int) 18, 'osa' => (int) 8, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 6, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 9, 'rsi' => (int) 9, 'sbr' => (int) 10, 'sbo' => (int) 8, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 10, 'sas' => (int) 10, 'shi' => (int) 6, 'smo' => (int) 7, 'sly' => (int) 14, 'spe' => (int) 10, 'spa' => (int) 8, 'tar' => (int) 19, 'tha' => (int) 10, 'tca' => (int) 8, 'esa' => (int) 8, 'tpr' => (int) 11, 'twi' => (int) 13, 'ugi' => (int) 9, 'vma' => (int) 8, 'vmu' => (int) 10, 'zma' => (int) 15 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb353780' $species_info = array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ) $local_species = 'bca' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000499', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1066', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p29780' => 'bna', 'A02p33180' => 'bna', 'A03p16470' => 'bna', 'A03p66010' => 'bna', 'A04p25970' => 'bna', 'A06p01270' => 'bna', 'A06p46080' => 'bna', 'A07p11400' => 'bna', 'A08p01840' => 'bna', 'A08p08230' => 'bna', 'A08p25740' => 'bna', 'A09p32070' => 'bna', 'A09p37830' => 'bna', 'A09p42840' => 'bna', 'A09p42850' => 'bna', 'Aa31LG10G2060' => 'aar', 'Aa31LG2G7410' => 'aar', 'Aa31LG6G10200' => 'aar', 'Aa31LG6G16680' => 'aar', 'Aa31LG6G8470' => 'aar', 'Aa31LG9G12730' => 'aar', 'Aa31LG9G13680' => 'aar', 'Aa31LG9G14920' => 'aar', 'Aa31LG9G6650' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4977' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5467' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3254' => 'aag', 'Actinidia02578' => 'ach', 'Actinidia07693' => 'ach', 'Actinidia08413' => 'ach', 'Actinidia08414' => 'ach', 'Actinidia15289' => 'ach', 'Actinidia19871' => 'ach', 'Actinidia21475' => 'ach', 'Actinidia22576' => 'ach', 'Actinidia28327' => 'ach', 'Actinidia32491' => 'ach', 'Actinidia39463' => 'ach', 'Actinidia39571' => 'ach', 'Ah.01g013750' => 'amhyb', 'Ah.01g023210' => 'amhyb', 'Ah.04g164850' => 'amhyb', 'Ah.05g178060' => 'amhyb', 'Ah.07g204270' => 'amhyb', 'Ah.07g208480' => 'amhyb', 'Ah.09g237410' => 'amhyb', 'Ah.14g089460' => 'amhyb', 'AL1G41790' => 'aly', 'AL1G49050' => 'aly', 'AL1G53810' => 'aly', 'AL1G61400' => 'aly', 'AL4G18580' => 'aly', 'AL5G12510' => 'aly', 'AL5G12540' => 'aly', 'AL6G43230' => 'aly', 'AL7G10370' => 'aly', 'AL7G19250' => 'aly', 'AL8G12240' => 'aly', 'AL8G18540' => 'aly', 'Aqoxy1G02409' => 'aox', 'Aqoxy2G03993' => 'aox', 'Aqoxy3G03357' => 'aox', 'Aqoxy4G00785' => 'aox', 'Aqoxy5G02598' => 'aox', 'Aqoxy6G00132' => 'aox', 'Aqoxy7G01776' => 'aox', 'Aqoxy7G02316' => 'aox', 'Aqoxy7G03973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.12AFKW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B8730' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27IQR1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3F75VG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3RE0GA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41TCQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.527VTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FIR39' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5W8UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DA38EV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ63HS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H1I32C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HC27T5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4M8AP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7N3CZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9UVDZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LS1NQA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT1D4B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SKC4TM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCFV76' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF9Q1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQWD9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1ZM88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WE07RT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YCK7VH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJE6Q6' => 'arhy', 'AT1G28240' => 'ath', 'AT1G34550' => 'ath', 'AT1G53040' => 'ath', 'AT2G02910' => 'ath', 'AT4G09630' => 'ath', 'AT4G38500' => 'ath', 'AT5G42660' => 'ath', 'AT5G46220' => 'ath', 'ATR0152G026' => 'atr', 'ATR0564G343' => 'atr', 'ATR0706G151' => 'atr', 'ATR0733G207' => 'atr', 'ATR0751G234' => 'atr', 'ATR0807G048' => 'atr', 'ATR1091G084' => 'atr', 'Atru.chr10.1229' => 'acertr', 'Atru.chr10.1230' => 'acertr', 'Atru.chr10.1874' => 'acertr', 'Atru.chr11.1808' => 'acertr', 'Atru.chr13.1795' => 'acertr', 'Atru.chr13.570' => 'acertr', 'Atru.chr2.2608' => 'acertr', 'Atru.chr2.2609' => 'acertr', 'Atru.chr5.3428' => 'acertr', 'Atru.chr8.1171' => 'acertr', 'AUR62004651' => 'cqu', 'AUR62008675' => 'cqu', 'AUR62010014' => 'cqu', 'AUR62013004' => 'cqu', 'AUR62014825' => 'cqu', 'AUR62015015' => 'cqu', 'AUR62015151' => 'cqu', 'AUR62017020' => 'cqu', 'AUR62019422' => 'cqu', 'AUR62023570' => 'cqu', 'AUR62025571' => 'cqu', 'AUR62029098' => 'cqu', 'AUR62033863' => 'cqu', 'AUR62034296' => 'cqu', 'AUR62040075' => 'cqu', 'BcaB02g07334' => 'bca', 'BcaB02g10575' => 'bca', 'BcaB03g12119' => 'bca', 'BcaB03g12120' => 'bca', 'BcaB03g13945' => 'bca', 'BcaB04g17123' => 'bca', 'BcaB04g17867' => 'bca', 'BcaB04g19839' => 'bca', 'BcaB07g30317' => 'bca', 'BcaB07g32432' => 'bca', 'BcaB07g33362' => 'bca', 'BcaB08g36611' => 'bca', 'BcaC01g00028' => 'bca', 'BcaC01g01356' => 'bca', 'BcaC01g02034' => 'bca', 'BcaC01g06051' => 'bca', 'BcaC03g16839' => 'bca', 'BcaC03g17176' => 'bca', 'BcaC05g26829' => 'bca', 'BcaC06g31490' => 'bca', 'BcaC06g35344' => 'bca', 'BcaC06g36570' => 'bca', 'BcaC07g37537' => 'bca', 'BcaC08g43491' => 'bca', 'BcaC08g43773' => 'bca', 'BcaNung00234' => 'bca', 'BcaNung01982' => 'bca', 'BcaNung03707' => 'bca', 'BcaNung06454' => 'bca', 'BolC2t10762H' => 'bol', 'BolC2t11191H' => 'bol', 'BolC3t14322H' => 'bol', 'BolC3t19747H' => 'bol', 'BolC3t21425H' => 'bol', 'BolC4t27800H' => 'bol', 'BolC5t31423H' => 'bol', 'BolC6t35951H' => 'bol', 'BolC6t36282H' => 'bol', 'BolC7t40678H' => 'bol', 'BolC7t40679H' => 'bol', 'BolC7t42222H' => 'bol', 'BolC7t43492H' => 'bol', 'BolC7t46785H' => 'bol', 'BolC8t47853H' => 'bol', 'BolC9t56805H' => 'bol', 'BraA02t08000Z' => 'bra', 'BraA02t08341Z' => 'bra', 'BraA03t10936Z' => 'bra', 'BraA03t15657Z' => 'bra', 'BraA04t18100Z' => 'bra', 'BraA05t20523Z' => 'bra', 'BraA06t23353Z' => 'bra', 'BraA06t27473Z' => 'bra', 'BraA06t27769Z' => 'bra', 'BraA07t28928Z' => 'bra', 'BraA08t32236Z' => 'bra', 'BraA08t32841Z' => 'bra', 'BraA08t34524Z' => 'bra', 'BraA09t38742Z' => 'bra', 'BraA09t39295Z' => 'bra', 'C02p47180' => 'bna', 'C02p50990' => 'bna', 'C03p19360' => 'bna', 'C03p74950' => 'bna', 'C03p91000' => 'bna', 'C04p63260' => 'bna', 'C05p27050' => 'bna', 'C06p08750' => 'bna', 'C06p11490' => 'bna', 'C07p02820' => 'bna', 'C07p17180' => 'bna', 'C07p29440' => 'bna', 'C07p63730' => 'bna', 'C09p39260' => 'bna', 'CAN.G1164.34' => 'can', 'CAN.G1164.39' => 'can', 'CAN.G1530.3' => 'can', 'CAN.G162.61' => 'can', 'CAN.G176.6' => 'can', 'CAN.G289.49' => 'can', 'CAN.G370.21' => 'can', 'CAN.G370.22' => 'can', 'CAN.G371.117' => 'can', 'CAN.G58.37' => 'can', 'CAN.G588.98' => 'can', 'CANSAT21G2266' => 'cansat', 'CANSAT25G2799' => 'cansat', 'CANSAT35G0862' => 'cansat', 'CANSAT35G1704' => 'cansat', 'CANSAT35G1760' => 'cansat', 'CANSAT56G3971' => 'cansat', 'CANSAT56G4116' => 'cansat', 'CANSAT80G1259' => 'cansat', 'CARHR027730' => 'chi', 'CARHR033880' => 'chi', 'CARHR043270' => 'chi', 'CARHR145330' => 'chi', 'CARHR145340' => 'chi', 'CARHR175570' => 'chi', 'CARHR181570' => 'chi', 'CARHR258470' => 'chi', 'CARHR260490' => 'chi', 'CARHR294220' => 'chi', 'Carub.0001s2668' => 'cru', 'Carub.0001s3257' => 'cru', 'Carub.0001s4220' => 'cru', 'Carub.0005s0179' => 'cru', 'Carub.0006s2807' => 'cru', 'Carub.0007s0039' => 'cru', 'Carub.0008s0169' => 'cru', 'Carub.0008s0636' => 'cru', 'Ca_00338_v3' => 'car', 'Ca_00542_v3' => 'car', 'Ca_01844_v3' => 'car', 'Ca_10611_v3' => 'car', 'Ca_13326_v3' => 'car', 'Ca_17944_v3' => 'car', 'Ca_18546_v3' => 'car', 'Ca_24219_v3' => 'car', 'Ca_29972_v3' => 'car', 'CBR_g3681' => 'cbr', 'CBR_g40021' => 'cbr', 'Cc01_g08140' => 'ccan', 'Cc02_g13410' => 'ccan', 'Cc02_g37480' => 'ccan', 'Cc05_g12030' => 'ccan', 'Cc09_g03370' => 'ccan', 'Cc09_g10300' => 'ccan', 'Cc10_g03530' => 'ccan', 'Cc10_g11380' => 'ccan', 'CDE01G0176' => 'cde', 'CDE02G0675' => 'cde', 'CDE02G0942' => 'cde', 'CDE02G1153' => 'cde', 'CDE02G4177' => 'cde', 'CDE04G2117' => 'cde', 'CDE04G2736' => 'cde', 'CDE08G1161' => 'cde', 'CDE09G1238' => 'cde', 'Cfa000467' => 'cfa', 'Cfa000947' => 'cfa', 'Cfa004969' => 'cfa', 'Cfa005284' => 'cfa', 'Cfa008993' => 'cfa', 'Cfa018187' => 'cfa', 'Cfa018454' => 'cfa', 'Cfa020585' => 'cfa', 'Ciclev10000424m.g' => 'ccl', 'Ciclev10003605m.g' => 'ccl', 'Ciclev10007828m.g' => 'ccl', 'Ciclev10014620m.g' => 'ccl', 'Ciclev10015169m.g' => 'ccl', 'Ciclev10018291m.g' => 'ccl', 'Ciclev10028256m.g' => 'ccl', 'Ciclev10033822m.g' => 'ccl', 'CiPaw.05G060300' => 'cil', 'CiPaw.05G085000' => 'cil', 'CiPaw.06G083700' => 'cil', 'CiPaw.06G120300' => 'cil', 'CiPaw.09G060500' => 'cil', 'CiPaw.09G123800' => 'cil', 'CiPaw.11G169700' => 'cil', 'CiPaw.12G118300' => 'cil', 'CiPaw.15G071000' => 'cil', 'CiPaw.15G081900' => 'cil', 'ClCG01G024610' => 'cla', 'ClCG03G006070' => 'cla', 'ClCG05G019250' => 'cla', 'ClCG09G009500' => 'cla', 'ClCG11G008200' => 'cla', 'ClCG11G018080' => 'cla', 'COL.COLO4_17373' => 'col', 'COL.COLO4_22994' => 'col', 'COL.COLO4_26389' => 'col', 'COL.COLO4_27170' => 'col', 'COL.COLO4_31074' => 'col', 'COL.COLO4_31465' => 'col', 'COL.COLO4_36438' => 'col', 'COL.COLO4_36439' => 'col', 'Cpa.g.c38781' => 'cpa', 'Cpa.g.sc128.12' => 'cpa', 'Cpa.g.sc166.7' => 'cpa', 'Cpa.g.sc166.8' => 'cpa', 'Cpa.g.sc20.111' => 'cpa', 'Cpa.g.sc27.31' => 'cpa', 'Cpa.g.sc64.36' => 'cpa', 'Cpa.g.sc64.37' => 'cpa', 'Cpa.g.sc66.49' => 'cpa', 'Cpa.g.sc80.64' => 'cpa', 'CsaV3_1G012320' => 'csa', 'CsaV3_2G008480' => 'csa', 'CsaV3_2G033450' => 'csa', 'CsaV3_3G044830' => 'csa', 'CsaV3_4G033710' => 'csa', 'CsaV3_6G051730' => 'csa', 'CsaV3_7G025350' => 'csa', 'CSS0001067' => 'camsi', 'CSS0005996' => 'camsi', 'CSS0006590' => 'camsi', 'CSS0009673' => 'camsi', 'CSS0010201' => 'camsi', 'CSS0010549' => 'camsi', 'CSS0011364' => 'camsi', 'CSS0014473' => 'camsi', 'CSS0014961' => 'camsi', 'CSS0020191' => 'camsi', 'CSS0021165' => 'camsi', 'CSS0022306' => 'camsi', 'CSS0030591' => 'camsi', 'CSS0030696' => 'camsi', 'CSS0032653' => 'camsi', 'CSS0037487' => 'camsi', 'CSS0041102' => 'camsi', 'CSS0041261' => 'camsi', 'CSS0046246' => 'camsi', 'CSS0049256' => 'camsi', 'DCAR_004075' => 'dca', 'DCAR_011538' => 'dca', 'DCAR_019553' => 'dca', 'DCAR_020952' => 'dca', 'DCAR_021739' => 'dca', 'DCAR_027407' => 'dca', 'DCAR_027913' => 'dca', 'DCAR_028066' => 'dca', 'Dinv05899' => 'din', 'Dinv07563' => 'din', 'Dinv08010' => 'din', 'Dinv14125' => 'din', 'Dinv20172' => 'din', 'Dinv30743' => 'din', 'Dinv31229' => 'din', 'Dinv34162' => 'din', 'Dinv36028' => 'din', 'Dinv39368' => 'din', 'Dinv40565' => 'din', 'Dinv41706' => 'din', 'Duzib052G0089' => 'dzi', 'Duzib116G0641' => 'dzi', 'Duzib132G0069' => 'dzi', 'Duzib132G1219' => 'dzi', 'Duzib147G0278' => 'dzi', 'Duzib160G0480' => 'dzi', 'Duzib170G0661' => 'dzi', 'Duzib177G0591' => 'dzi', 'Duzib187G1353' => 'dzi', 'Duzib192G0858' => 'dzi', 'Duzib192G0883' => 'dzi', 'Duzib213G0506' => 'dzi', 'Duzib235G0289' => 'dzi', 'Duzib251G0422' => 'dzi', 'ECA232G3898' => 'eca', 'ECA233G5950' => 'eca', 'ECA234G1699' => 'eca', 'ECA234G2421' => 'eca', 'ECA236G0426' => 'eca', 'ECA236G4331' => 'eca', 'ECA248G2573' => 'eca', 'EL10Ac1g00077' => 'bvu', 'EL10Ac1g01746' => 'bvu', 'EL10Ac2g03464' => 'bvu', 'EL10Ac4g08176' => 'bvu', 'EL10Ac7g17521' => 'bvu', 'EL10Ac8g20386' => 'bvu', 'EL10Ac9g21343' => 'bvu', 'EL10Ac9g22688' => 'bvu', 'Eucgr.B03434' => 'egr', 'Eucgr.D00618' => 'egr', 'Eucgr.E02395' => 'egr', 'Eucgr.F01129' => 'egr', 'Eucgr.F02622' => 'egr', 'Eucgr.F04207' => 'egr', 'FAN01G0570' => 'fan', 'FAN03G3351' => 'fan', 'FAN06G3702' => 'fan', 'FAN07G2149' => 'fan', 'FAN10G3758' => 'fan', 'FAN11G1170' => 'fan', 'FAN11G2050' => 'fan', 'FAN11G2724' => 'fan', 'FAN12G1700' => 'fan', 'FAN12G2028' => 'fan', 'FAN15G1160' => 'fan', 'FAN15G3063' => 'fan', 'FAN16G2540' => 'fan', 'FAN16G3077' => 'fan', 'FAN16G3624' => 'fan', 'FAN17G0221' => 'fan', 'FAN20G2492' => 'fan', 'FAN20G2905' => 'fan', 'FAN21G0548' => 'fan', 'FAN21G1300' => 'fan', 'FAN22G0077' => 'fan', 'FAN22G1315' => 'fan', 'FAN24G1280' => 'fan', 'FAN24G1445' => 'fan', 'FAN24G3527' => 'fan', 'FAN25G0464' => 'fan', 'FAN25G2885' => 'fan', 'FAN25G3270' => 'fan', 'FAN27G1101' => 'fan', 'FAN27G2846' => 'fan', 'FAN27G3524' => 'fan', 'FvH4_2g11770' => 'fve', 'FvH4_2g15630' => 'fve', 'FvH4_3g05570' => 'fve', 'FvH4_3g09110' => 'fve', 'FvH4_3g19940' => 'fve', 'FvH4_4g04821' => 'fve', 'FvH4_4g31480' => 'fve', 'FvH4_7g01740' => 'fve', 'Glyma.05G130400' => 'gma', 'Glyma.05G156400' => 'gma', 'Glyma.07G197000' => 'gma', 'Glyma.08G085151' => 'gma', 'Glyma.08G114500' => 'gma', 'Glyma.08G300400' => 'gma', 'Glyma.10G215800' => 'gma', 'Glyma.12G224400' => 'gma', 'Glyma.13G179300' => 'gma', 'Glyma.13G218151' => 'gma', 'Glyma.13G238800' => 'gma', 'Glyma.13G276900' => 'gma', 'Glyma.14G078200' => 'gma', 'Glyma.15G074500' => 'gma', 'Glyma.15G094100' => 'gma', 'Glyma.17G247200' => 'gma', 'Glyma.18G120100' => 'gma', 'Glyma.20G176000' => 'gma', 'Gohir.A01G063600' => 'ghi', 'Gohir.A01G170301' => 'ghi', 'Gohir.A02G060500' => 'ghi', 'Gohir.A05G133850' => 'ghi', 'Gohir.A05G161400' => 'ghi', 'Gohir.A06G012900' => 'ghi', 'Gohir.A06G035901' => 'ghi', 'Gohir.A06G127100' => 'ghi', 'Gohir.A06G210500' => 'ghi', 'Gohir.A08G008650' => 'ghi', 'Gohir.A09G072700' => 'ghi', 'Gohir.A09G088301' => 'ghi', 'Gohir.A10G040600' => 'ghi', 'Gohir.A12G036300' => 'ghi', 'Gohir.A12G143350' => 'ghi', 'Gohir.A12G165500' => 'ghi', 'Gohir.A13G145700' => 'ghi', 'Gohir.D01G050000' => 'ghi', 'Gohir.D01G051366' => 'ghi', 'Gohir.D01G161350' => 'ghi', 'Gohir.D02G065900' => 'ghi', 'Gohir.D05G164200' => 'ghi', 'Gohir.D05G355500' => 'ghi', 'Gohir.D06G010400' => 'ghi', 'Gohir.D06G111250' => 'ghi', 'Gohir.D06G132000' => 'ghi', 'Gohir.D06G210500' => 'ghi', 'Gohir.D07G165675' => 'ghi', 'Gohir.D08G062240' => 'ghi', 'Gohir.D08G086101' => 'ghi', 'Gohir.D08G138060' => 'ghi', 'Gohir.D09G072300' => 'ghi', 'Gohir.D10G041400' => 'ghi', 'Gohir.D11G191020' => 'ghi', 'Gohir.D11G212066' => 'ghi', 'Gohir.D12G036300' => 'ghi', 'Gohir.D12G168600' => 'ghi', 'Gohir.D13G150600' => 'ghi', 'Gorai.001G057300' => 'gra', 'Gorai.002G069900' => 'gra', 'Gorai.002G200000' => 'gra', 'Gorai.003G067600' => 'gra', 'Gorai.005G074800' => 'gra', 'Gorai.006G087300' => 'gra', 'Gorai.008G037500' => 'gra', 'Gorai.008G181400' => 'gra', 'Gorai.009G169400' => 'gra', 'Gorai.009G387900' => 'gra', 'Gorai.010G013300' => 'gra', 'Gorai.010G153800' => 'gra', 'Gorai.010G255800' => 'gra', 'Gorai.011G043700' => 'gra', 'Gorai.011G198900' => 'gra', 'Gorai.013G168400' => 'gra', 'GSVIVG01005212001' => 'vvi', 'GSVIVG01006163001' => 'vvi', 'GSVIVG01009625001' => 'vvi', 'GSVIVG01014338001' => 'vvi', 'GSVIVG01020005001' => 'vvi', 'GSVIVG01021450001' => 'vvi', 'GSVIVG01023975001' => 'vvi', 'GSVIVG01034490001' => 'vvi', 'HanXRQChr04g0112071' => 'han', 'HanXRQChr05g0131151' => 'han', 'HanXRQChr09g0262371' => 'han', 'HanXRQChr09g0268401' => 'han', 'HanXRQChr10g0279241' => 'han', 'HanXRQChr10g0297961' => 'han', 'HanXRQChr11g0326231' => 'han', 'HanXRQChr11g0328471' => 'han', 'HanXRQChr16g0507941' => 'han', 'HanXRQChr17g0560211' => 'han', 'Haze_02108' => 'cav', 'Haze_02428' => 'cav', 'Haze_05593' => 'cav', 'Haze_06448' => 'cav', 'Haze_09427' => 'cav', 'Haze_12022' => 'cav', 'Haze_17612' => 'cav', 'Haze_17928' => 'cav', 'Hma1.2p1_0032F.1_g019250' => 'hma', 'Hma1.2p1_0163F.1_g072690' => 'hma', 'Hma1.2p1_0265F.1_g106710' => 'hma', 'Hma1.2p1_0286F.1_g113970' => 'hma', 'Hma1.2p1_0363F.1_g136640' => 'hma', 'Hma1.2p1_0584F.1_g183470' => 'hma', 'Hma1.2p1_0885F.1_g232570' => 'hma', 'HPP92_006022' => 'vpl', 'HPP92_007320' => 'vpl', 'HPP92_011521' => 'vpl', 'HPP92_019387' => 'vpl', 'HPP92_024038' => 'vpl', 'Hund05891' => 'sun', 'Hund06450' => 'sun', 'Hund12053' => 'sun', 'Hund16800' => 'sun', 'Hund21222' => 'sun', 'Hund22896' => 'sun', 'Hund23746' => 'sun', 'Hund27083' => 'sun', 'Lalb_Chr02g0141831' => 'lal', 'Lalb_Chr02g0141841' => 'lal', 'Lalb_Chr05g0220411' => 'lal', 'Lalb_Chr06g0162081' => 'lal', 'Lalb_Chr09g0327651' => 'lal', 'Lalb_Chr13g0295051' => 'lal', 'Lalb_Chr15g0086801' => 'lal', 'Lalb_Chr16g0383781' => 'lal', 'Lalb_Chr16g0383791' => 'lal', 'Lalb_Chr18g0055441' => 'lal', 'Lalb_Chr18g0059611' => 'lal', 'Lalb_Chr20g0109661' => 'lal', 'Lalb_Chr20g0109831' => 'lal', 'Lalb_Chr20g0121871' => 'lal', 'Lalb_Chr22g0355361' => 'lal', 'Lalb_Chr25g0286371' => 'lal', 'Lj1A1187G43' => 'lonja', 'Lj1A1205T50' => 'lonja', 'Lj1A800G33' => 'lonja', 'Lj1C1187T7' => 'lonja', 'Lj1C843T11' => 'lonja', 'Lj1g0010940' => 'lja', 'Lj2A288T69' => 'lonja', 'Lj3g0024276' => 'lja', 'Lj4A47T76' => 'lonja', 'Lj4g0005805' => 'lja', 'Lj4g0006097' => 'lja', 'Lj4g0008528' => 'lja', 'Lj4g0024907' => 'lja', 'Lj5g0012472' => 'lja', 'Lj5g0018648' => 'lja', 'Lj6C789G1' => 'lonja', 'Lj6g0004000' => 'lja', 'Lj7A292G67' => 'lonja', 'Lj7A292T64' => 'lonja', 'Lj9A400T58' => 'lonja', 'Lsat_1_v5_gn_1_126181' => 'lsa', 'Lsat_1_v5_gn_4_123041' => 'lsa', 'Lsat_1_v5_gn_4_133620' => 'lsa', 'Lsat_1_v5_gn_4_53221' => 'lsa', 'Lsat_1_v5_gn_4_71961' => 'lsa', 'Lsat_1_v5_gn_7_105241' => 'lsa', 'Lsat_1_v5_gn_7_21361' => 'lsa', 'Lsat_1_v5_gn_7_28860' => 'lsa', 'Lsat_1_v5_gn_7_31260' => 'lsa', 'Lsat_1_v5_gn_8_52801' => 'lsa', 'Manes.02G191400' => 'mes', 'Manes.03G110100' => 'mes', 'Manes.04G071100' => 'mes', 'Manes.05G100500' => 'mes', 'Manes.05G164700' => 'mes', 'Manes.15G087000' => 'mes', 'Manes.15G121500' => 'mes', 'Manes.16G028300' => 'mes', 'Manes.17G046100' => 'mes', 'Manes.17G069800' => 'mes', 'Manes.18G100500' => 'mes', 'Mapoly0002s0109' => 'mpo', 'Mapoly0024s0007' => 'mpo', 'Mapoly0089s0032' => 'mpo', 'MBI04_g42241_MAGBIO' => 'mbi', 'MBI05_g11988_MAGBIO' => 'mbi', 'MBI05_g35452_MAGBIO' => 'mbi', 'MBI07_g30179_MAGBIO' => 'mbi', 'MBI07_g35859_MAGBIO' => 'mbi', 'MBI07_g35860_MAGBIO' => 'mbi', 'MBI07_g37166_MAGBIO' => 'mbi', 'MBI08_g18172_MAGBIO' => 'mbi', 'MBI09_g08441_MAGBIO' => 'mbi', 'MBI13_g01676_MAGBIO' => 'mbi', 'MBI14_g42955_MAGBIO' => 'mbi', 'MBI16_g13161_MAGBIO' => 'mbi', 'MBI17_g27204_MAGBIO' => 'mbi', 'MBI19_g21595_MAGBIO' => 'mbi', 'MD00G1148400' => 'mdo', 'MD02G1301200' => 'mdo', 'MD03G1227800' => 'mdo', 'MD05G1041100' => 'mdo', 'MD05G1124800' => 'mdo', 'MD05G1284000' => 'mdo', 'MD05G1338800' => 'mdo', 'MD05G1338900' => 'mdo', 'MD07G1022800' => 'mdo', 'MD10G1047500' => 'mdo', 'MD10G1127500' => 'mdo', 'MD10G1262300' => 'mdo', 'MD10G1293800' => 'mdo', 'MD16G1074300' => 'mdo', 'Medtr1g021670' => 'mtr', 'Medtr1g096320' => 'mtr', 'Medtr2g013690' => 'mtr', 'Medtr2g019450' => 'mtr', 'Medtr2g085170' => 'mtr', 'Medtr4g088785' => 'mtr', 'Medtr8g055930' => 'mtr', 'Medtr8g085850' => 'mtr', 'MELO3C002605.2' => 'cme', 'MELO3C003891.2' => 'cme', 'MELO3C004012.2' => 'cme', 'MELO3C007134.2' => 'cme', 'MELO3C008118.2' => 'cme', 'MELO3C016700.2' => 'cme', 'MELO3C024127.2' => 'cme', 'MELO3C033361.2' => 'cme', 'MELO3C033362.2' => 'cme', 'Migut.C00430' => 'egut', 'Migut.C01246' => 'egut', 'Migut.E00101' => 'egut', 'Migut.H01486' => 'egut', 'Migut.H01939' => 'egut', 'Migut.K00360' => 'egut', 'Migut.M00910' => 'egut', 'Migut.M01139' => 'egut', 'Migut.N02677' => 'egut', 'MSTRG.13252' => 'ama', 'MSTRG.14701' => 'ama', 'MSTRG.1521' => 'ama', 'MSTRG.15884' => 'ama', 'MSTRG.16242' => 'ama', 'MSTRG.22285' => 'ama', 'MSTRG.22444' => 'ama', 'MSTRG.2349' => 'ama', 'MSTRG.26308' => 'ama', 'MSTRG.28296' => 'ama', 'MSTRG.9895' => 'ama', 'Nitab4.5_0000110g0060' => 'nta', 'Nitab4.5_0000420g0130' => 'nta', 'Nitab4.5_0000422g0030' => 'nta', 'Nitab4.5_0000560g0180' => 'nta', 'Nitab4.5_0000703g0100' => 'nta', 'Nitab4.5_0000786g0200' => 'nta', 'Nitab4.5_0001336g0020' => 'nta', 'Nitab4.5_0001796g0030' => 'nta', 'Nitab4.5_0003348g0060' => 'nta', 'Nitab4.5_0003698g0040' => 'nta', 'Nitab4.5_0003942g0090' => 'nta', 'Nitab4.5_0004775g0070' => 'nta', 'Nitab4.5_0004864g0030' => 'nta', 'Nitab4.5_0005615g0020' => 'nta', 'Nitab4.5_0009288g0030' => 'nta', 'Nitab4.5_0009341g0010' => 'nta', 'Nitab4.5_0009535g0010' => 'nta', 'Nn1g03995' => 'nnu', 'Nn1g04100' => 'nnu', 'Nn1g06530' => 'nnu', 'Nn3g16404' => 'nnu', 'Nn3g17212' => 'nnu', 'Nn3g20776' => 'nnu', 'Nn3g21923' => 'nnu', 'Nn5g27737' => 'nnu', 'Nn5g29461' => 'nnu', 'Nn7g38355' => 'nnu', 'Nn8g39873' => 'nnu', 'Oeu000548.2' => 'oeu', 'Oeu004672.1' => 'oeu', 'Oeu015605.2' => 'oeu', 'Oeu016092.1' => 'oeu', 'Oeu017879.3' => 'oeu', 'Oeu024910.1' => 'oeu', 'Oeu028965.1' => 'oeu', 'Oeu031269.1' => 'oeu', 'Oeu031270.1' => 'oeu', 'Oeu032535.1' => 'oeu', 'Oeu034151.1' => 'oeu', 'Oeu034152.1' => 'oeu', 'Oeu034588.2' => 'oeu', 'Oeu050846.1' => 'oeu', 'Oeu050849.2' => 'oeu', 'Oeu051063.2' => 'oeu', 'Oeu052368.1' => 'oeu', 'Oeu052370.1' => 'oeu', 'Os01g0210400' => 'osa', 'Os01g0304300' => 'osa', 'Os01g0749100' => 'osa', 'Os02g0745800' => 'osa', 'Os03g0769050' => 'osa', 'Os05g0531500' => 'osa', 'Os06g0724300' => 'osa', 'Os11g0198100' => 'osa', 'Peaxi162Scf00069g01425' => 'pax', 'Peaxi162Scf00280g00811' => 'pax', 'Peaxi162Scf00310g00615' => 'pax', 'Peaxi162Scf00362g00542' => 'pax', 'Peaxi162Scf00461g00310' => 'pax', 'Peaxi162Scf00530g00118' => 'pax', 'Peaxi162Scf00541g00057' => 'pax', 'Peaxi162Scf00661g00017' => 'pax', 'Peaxi162Scf00926g00027' => 'pax', 'Peaxi162Scf01064g00263' => 'pax', 'Peaxi162Scf01211g00135' => 'pax', 'PGR004G2336' => 'pgr', 'PGR042G0327' => 'pgr', 'PGR042G1957' => 'pgr', 'PGR042G2003' => 'pgr', 'PGR042G3929' => 'pgr', 'PGR083G1137' => 'pgr', 'PGR083G1364' => 'pgr', 'PGSC0003DMG400003381' => 'stu', 'PGSC0003DMG400003417' => 'stu', 'PGSC0003DMG400008981' => 'stu', 'PGSC0003DMG400012417' => 'stu', 'PGSC0003DMG400012823' => 'stu', 'PGSC0003DMG400016885' => 'stu', 'PGSC0003DMG400022812' => 'stu', 'PGSC0003DMG400029726' => 'stu', 'PGSC0003DMG401009243' => 'stu', 'PGSC0003DMG401031505' => 'stu', 'PGSC0003DMG402031505' => 'stu', 'Phvul.001G017600' => 'pvu', 'Phvul.002G193500' => 'pvu', 'Phvul.002G228900' => 'pvu', 'Phvul.002G236800' => 'pvu', 'Phvul.003G049500' => 'pvu', 'Phvul.005G072000' => 'pvu', 'Phvul.006G164800' => 'pvu', 'Phvul.006G185100' => 'pvu', 'Phvul.007G090000' => 'pvu', 'Potri.001G399800' => 'ptr', 'Potri.002G149900' => 'ptr', 'Potri.004G044100' => 'ptr', 'Potri.004G177600' => 'ptr', 'Potri.009G138000' => 'ptr', 'Potri.010G094000' => 'ptr', 'Potri.011G053000' => 'ptr', 'Potri.011G119300' => 'ptr', 'Potri.013G113700' => 'ptr', 'Potri.018G107800' => 'ptr', 'Potri.019G084100' => 'ptr', 'Pp3c14_23720' => 'ppa', 'Pp3c16_6340' => 'ppa', 'Pp3c23_13420' => 'ppa', 'Pp3c24_2740' => 'ppa', 'Pp3c25_860' => 'ppa', 'Pp3c8_21750' => 'ppa', 'Prupe.1G273000' => 'ppe', 'Prupe.1G273700' => 'ppe', 'Prupe.1G274100' => 'ppe', 'Prupe.2G023300' => 'ppe', 'Prupe.4G048000' => 'ppe', 'Prupe.4G080400' => 'ppe', 'Prupe.4G181200' => 'ppe', 'Prupe.8G056900' => 'ppe', 'Prupe.8G168700' => 'ppe', 'Psat1g189080' => 'psa', 'Psat1g204760' => 'psa', 'Psat4g175560' => 'psa', 'Psat4g177720' => 'psa', 'Psat5g244240' => 'psa', 'Psat6g010720' => 'psa', 'Psat6g187200' => 'psa', 'Psat7g072040' => 'psa', 'PSO017G3501' => 'pso', 'PSO063G2148' => 'pso', 'PSO063G5608' => 'pso', 'PSO210G6392' => 'pso', 'PSO541G2319' => 'pso', 'PSO541G2836' => 'pso', 'PSO541G4012' => 'pso', 'PSO541G6253' => 'pso', 'PSO675G0580' => 'pso', 'PSO675G0856' => 'pso', 'PSO675G5635' => 'pso', 'PSO675G9157' => 'pso', 'PSO832G1660' => 'pso', 'PSO832G1969' => 'pso', 'QL02p007186' => 'qlo', 'QL02p033904' => 'qlo', 'QL03p064391' => 'qlo', 'QL05p040593' => 'qlo', 'QL05p058242' => 'qlo', 'QL08p021825' => 'qlo', 'QL11p004981' => 'qlo', 'RcHm_v2.0_Chr1g0318301' => 'rch', 'RcHm_v2.0_Chr4g0418501' => 'rch', 'RcHm_v2.0_Chr4g0439971' => 'rch', 'RcHm_v2.0_Chr5g0008541' => 'rch', 'RcHm_v2.0_Chr5g0014101' => 'rch', 'RcHm_v2.0_Chr5g0014131' => 'rch', 'RcHm_v2.0_Chr5g0033621' => 'rch', 'RcHm_v2.0_Chr6g0272041' => 'rch', 'RcHm_v2.0_Chr6g0278831' => 'rch', 'Rhsim02G0130400' => 'rsi', 'Rhsim02G0171100' => 'rsi', 'Rhsim05G0053000' => 'rsi', 'Rhsim05G0053100' => 'rsi', 'Rhsim06G0096500' => 'rsi', 'Rhsim06G0096600' => 'rsi', 'Rhsim06G0199100' => 'rsi', 'Rhsim12G0062300' => 'rsi', 'Rhsim12G0062800' => 'rsi', 'Sabra02G0118600' => 'sbr', 'Sabra04G0027300' => 'sbr', 'Sabra04G0119500' => 'sbr', 'Sabra08G0112500' => 'sbr', 'Sabra11G0036800' => 'sbr', 'Sabra11G0103800' => 'sbr', 'Sabra13G0096300' => 'sbr', 'Sabra16G0262300' => 'sbr', 'Sabra18G0091700' => 'sbr', 'Sabra19G0095400' => 'sbr', 'SalBow6G3080' => 'sbo', 'SalBow7G1157' => 'sbo', 'SalBow7G2123' => 'sbo', 'SalBow7G2285' => 'sbo', 'SalBow7G3537' => 'sbo', 'SalBow8G2947' => 'sbo', 'SalBow8G4463' => 'sbo', 'SalBow8G5466' => 'sbo', 'Sc01g0001750' => 'sci', 'Sc02g0006640' => 'sci', 'Sc02g0006670' => 'sci', 'Sc04g0008220' => 'sci', 'Sc05g0006190' => 'sci', 'Sc08g0002760' => 'sci', 'Sc17g0006170' => 'sci', 'Sc22g0002050' => 'sci', 'Sc23g0001190' => 'sci', 'Sc24g0000980' => 'sci', 'Sed0006245' => 'sed', 'Sed0007543' => 'sed', 'Sed0009411' => 'sed', 'Sed0010765' => 'sed', 'Sed0012944' => 'sed', 'Sed0014682' => 'sed', 'Sed0016174' => 'sed', 'Sed0016796' => 'sed', 'Sed0020317' => 'sed', 'Sed0021467' => 'sed', 'SEGI_01316' => 'sgi', 'SEGI_03374' => 'sgi', 'SEGI_16265' => 'sgi', 'SEGI_18569' => 'sgi', 'SEGI_20351' => 'sgi', 'SEGI_26395' => 'sgi', 'SEGI_29469' => 'sgi', 'SEGI_34771' => 'sgi', 'SEGI_36769' => 'sgi', 'SEGI_37139' => 'sgi', 'SGA_v2.0_scaffold100G29687' => 'sas', 'SGA_v2.0_scaffold118G32472' => 'sas', 'SGA_v2.0_scaffold14G07051' => 'sas', 'SGA_v2.0_scaffold183G39845' => 'sas', 'SGA_v2.0_scaffold1G00174' => 'sas', 'SGA_v2.0_scaffold22G09714' => 'sas', 'SGA_v2.0_scaffold333G48992' => 'sas', 'SGA_v2.0_scaffold46G17491' => 'sas', 'SGA_v2.0_scaffold49G18294' => 'sas', 'SGA_v2.0_scaffold63G21658' => 'sas', 'SHI01741' => 'shi', 'SHI05771' => 'shi', 'SHI18077' => 'shi', 'SHI20525' => 'shi', 'SHI20527' => 'shi', 'SHI20528' => 'shi', 'SMO172G0185' => 'smo', 'SMO198G0020' => 'smo', 'SMO351G0006' => 'smo', 'SMO356G0118' => 'smo', 'SMO358G0296' => 'smo', 'SMO367G0079' => 'smo', 'SMO367G1277' => 'smo', 'Solyc01g014220.3' => 'sly', 'Solyc01g111770.2' => 'sly', 'Solyc02g078180.3' => 'sly', 'Solyc03g006430.3' => 'sly', 'Solyc03g006456.1' => 'sly', 'Solyc03g079860.2' => 'sly', 'Solyc04g079770.3' => 'sly', 'Solyc05g007430.4' => 'sly', 'Solyc07g063150.3' => 'sly', 'Solyc08g016620.3' => 'sly', 'Solyc09g057590.3' => 'sly', 'Solyc09g057600.1' => 'sly', 'Solyc10g009050.3' => 'sly', 'Solyc11g017420.2' => 'sly', 'Sopen01g053810' => 'spe', 'Sopen02g023040' => 'spe', 'Sopen03g002440' => 'spe', 'Sopen04g033350' => 'spe', 'Sopen05g003310' => 'spe', 'Sopen07g004050' => 'spe', 'Sopen07g031340' => 'spe', 'Sopen08g006990' => 'spe', 'Sopen10g004830' => 'spe', 'Sopen11g009370' => 'spe', 'Sp1g24450' => 'spa', 'Sp1g29670' => 'spa', 'Sp1g39600' => 'spa', 'Sp2g11080' => 'spa', 'Sp2g13970' => 'spa', 'Sp4g16130' => 'spa', 'Sp6g13080' => 'spa', 'Sp7g37270' => 'spa', 'TAR371G0065' => 'tar', 'TAR376G0340' => 'tar', 'TAR376G0435' => 'tar', 'TAR381G0002' => 'tar', 'TAR381G1236' => 'tar', 'TAR624G0055' => 'tar', 'TAR624G0324' => 'tar', 'TAR624G0696' => 'tar', 'TAR624G0906' => 'tar', 'TAR625G0107' => 'tar', 'TAR626G0015' => 'tar', 'TAR626G1356' => 'tar', 'TAR627G0888' => 'tar', 'TAR628G0399' => 'tar', 'TAR628G1327' => 'tar', 'TAR629G2831' => 'tar', 'TAR629G2874' => 'tar', 'TAR633G1432' => 'tar', 'TAR633G2771' => 'tar', 'THA.LOC104803394' => 'tha', 'THA.LOC104805153' => 'tha', 'THA.LOC104806784' => 'tha', 'THA.LOC104810473' => 'tha', 'THA.LOC104813100' => 'tha', 'THA.LOC104814215' => 'tha', 'THA.LOC104815554' => 'tha', 'THA.LOC104820544' => 'tha', 'THA.LOC104824754' => 'tha', 'THA.LOC104827717' => 'tha', 'Thecc.02G031400' => 'tca', 'Thecc.02G055900' => 'tca', 'Thecc.02G350800' => 'tca', 'Thecc.06G150900' => 'tca', 'Thecc.06G186600' => 'tca', 'Thecc.07G089600' => 'tca', 'Thecc.08G020400' => 'tca', 'Thecc.08G182100' => 'tca', 'Thhalv10000873m.g' => 'esa', 'Thhalv10004185m.g' => 'esa', 'Thhalv10006981m.g' => 'esa', 'Thhalv10007204m.g' => 'esa', 'Thhalv10011374m.g' => 'esa', 'Thhalv10013482m.g' => 'esa', 'Thhalv10017801m.g' => 'esa', 'Thhalv10024983m.g' => 'esa', 'TPR.G12072' => 'tpr', 'TPR.G15769' => 'tpr', 'TPR.G16504' => 'tpr', 'TPR.G16506' => 'tpr', 'TPR.G24345' => 'tpr', 'TPR.G26666' => 'tpr', 'TPR.G27320' => 'tpr', 'TPR.G31819' => 'tpr', 'TPR.G38879' => 'tpr', 'TPR.G39015' => 'tpr', 'TPR.G8819' => 'tpr', 'TWI09G0924' => 'twi', 'TWI12G0811' => 'twi', 'TWI12G1294' => 'twi', 'TWI31G0150' => 'twi', 'TWI36G1262' => 'twi', 'TWI38G1287' => 'twi', 'TWI38G1633' => 'twi', 'TWI38G1982' => 'twi', 'TWI39G0116' => 'twi', 'TWI60G1011' => 'twi', 'TWI63G0171' => 'twi', 'TWI73G0839' => 'twi', 'TWI79G1511' => 'twi', 'unitig_0.g915' => 'ugi', 'unitig_0.g916' => 'ugi', 'unitig_21.g20219' => 'ugi', 'unitig_21.g20416' => 'ugi', 'unitig_578.g16132' => 'ugi', 'unitig_578.g16718' => 'ugi', 'unitig_62.g23481' => 'ugi', 'unitig_744.g24535' => 'ugi', 'unitig_749.g13525' => 'ugi', 'vmacro01248' => 'vma', 'vmacro02290' => 'vma', 'vmacro10946' => 'vma', 'vmacro11865' => 'vma', 'vmacro12493' => 'vma', 'vmacro17322' => 'vma', 'vmacro21599' => 'vma', 'vmacro23041' => 'vma', 'VMungo0251G0004' => 'vmu', 'VMungo0251G2639' => 'vmu', 'VMungo0251G2967' => 'vmu', 'VMungo0540G0864' => 'vmu', 'VMungo0540G1569' => 'vmu', 'VMungo0647G0317' => 'vmu', 'VMungo0720G1373' => 'vmu', 'VMungo0720G1508' => 'vmu', 'VMungo1080G0485' => 'vmu', 'VMungo1215G3177' => 'vmu', 'Zm00001eb112600' => 'zma', 'Zm00001eb120220' => 'zma', 'Zm00001eb153240' => 'zma', 'Zm00001eb168880' => 'zma', 'Zm00001eb213920' => 'zma', 'Zm00001eb228280' => 'zma', 'Zm00001eb254580' => 'zma', 'Zm00001eb272180' => 'zma', 'Zm00001eb293190' => 'zma', 'Zm00001eb322930' => 'zma', 'Zm00001eb353360' => 'zma', 'Zm00001eb353390' => 'zma', 'Zm00001eb353430' => 'zma', 'Zm00001eb353440' => 'zma', 'Zm00001eb353780' => 'zma' ), 'gf_id' => 'HOM05D000499', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000499' ), 'data_identifier' => 'HOM05D000499', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000499', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1066', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p29780' => 'bna', 'A02p33180' => 'bna', 'A03p16470' => 'bna', 'A03p66010' => 'bna', 'A04p25970' => 'bna', 'A06p01270' => 'bna', 'A06p46080' => 'bna', 'A07p11400' => 'bna', 'A08p01840' => 'bna', 'A08p08230' => 'bna', 'A08p25740' => 'bna', 'A09p32070' => 'bna', 'A09p37830' => 'bna', 'A09p42840' => 'bna', 'A09p42850' => 'bna', 'Aa31LG10G2060' => 'aar', 'Aa31LG2G7410' => 'aar', 'Aa31LG6G10200' => 'aar', 'Aa31LG6G16680' => 'aar', 'Aa31LG6G8470' => 'aar', 'Aa31LG9G12730' => 'aar', 'Aa31LG9G13680' => 'aar', 'Aa31LG9G14920' => 'aar', 'Aa31LG9G6650' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4977' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5467' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3254' => 'aag', 'Actinidia02578' => 'ach', 'Actinidia07693' => 'ach', 'Actinidia08413' => 'ach', 'Actinidia08414' => 'ach', 'Actinidia15289' => 'ach', 'Actinidia19871' => 'ach', 'Actinidia21475' => 'ach', 'Actinidia22576' => 'ach', 'Actinidia28327' => 'ach', 'Actinidia32491' => 'ach', 'Actinidia39463' => 'ach', 'Actinidia39571' => 'ach', 'Ah.01g013750' => 'amhyb', 'Ah.01g023210' => 'amhyb', 'Ah.04g164850' => 'amhyb', 'Ah.05g178060' => 'amhyb', 'Ah.07g204270' => 'amhyb', 'Ah.07g208480' => 'amhyb', 'Ah.09g237410' => 'amhyb', 'Ah.14g089460' => 'amhyb', 'AL1G41790' => 'aly', 'AL1G49050' => 'aly', 'AL1G53810' => 'aly', 'AL1G61400' => 'aly', 'AL4G18580' => 'aly', 'AL5G12510' => 'aly', 'AL5G12540' => 'aly', 'AL6G43230' => 'aly', 'AL7G10370' => 'aly', 'AL7G19250' => 'aly', 'AL8G12240' => 'aly', 'AL8G18540' => 'aly', 'Aqoxy1G02409' => 'aox', 'Aqoxy2G03993' => 'aox', 'Aqoxy3G03357' => 'aox', 'Aqoxy4G00785' => 'aox', 'Aqoxy5G02598' => 'aox', 'Aqoxy6G00132' => 'aox', 'Aqoxy7G01776' => 'aox', 'Aqoxy7G02316' => 'aox', 'Aqoxy7G03973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.12AFKW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B8730' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27IQR1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3F75VG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3RE0GA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41TCQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.527VTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FIR39' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5W8UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DA38EV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ63HS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H1I32C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HC27T5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4M8AP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7N3CZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9UVDZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LS1NQA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT1D4B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SKC4TM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCFV76' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF9Q1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQWD9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1ZM88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WE07RT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YCK7VH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJE6Q6' => 'arhy', 'AT1G28240' => 'ath', 'AT1G34550' => 'ath', 'AT1G53040' => 'ath', 'AT2G02910' => 'ath', 'AT4G09630' => 'ath', 'AT4G38500' => 'ath', 'AT5G42660' => 'ath', 'AT5G46220' => 'ath', 'ATR0152G026' => 'atr', 'ATR0564G343' => 'atr', 'ATR0706G151' => 'atr', 'ATR0733G207' => 'atr', 'ATR0751G234' => 'atr', 'ATR0807G048' => 'atr', 'ATR1091G084' => 'atr', 'Atru.chr10.1229' => 'acertr', 'Atru.chr10.1230' => 'acertr', 'Atru.chr10.1874' => 'acertr', 'Atru.chr11.1808' => 'acertr', 'Atru.chr13.1795' => 'acertr', 'Atru.chr13.570' => 'acertr', 'Atru.chr2.2608' => 'acertr', 'Atru.chr2.2609' => 'acertr', 'Atru.chr5.3428' => 'acertr', 'Atru.chr8.1171' => 'acertr', 'AUR62004651' => 'cqu', 'AUR62008675' => 'cqu', 'AUR62010014' => 'cqu', 'AUR62013004' => 'cqu', 'AUR62014825' => 'cqu', 'AUR62015015' => 'cqu', 'AUR62015151' => 'cqu', 'AUR62017020' => 'cqu', 'AUR62019422' => 'cqu', 'AUR62023570' => 'cqu', 'AUR62025571' => 'cqu', 'AUR62029098' => 'cqu', 'AUR62033863' => 'cqu', 'AUR62034296' => 'cqu', 'AUR62040075' => 'cqu', 'BcaB02g07334' => 'bca', 'BcaB02g10575' => 'bca', 'BcaB03g12119' => 'bca', 'BcaB03g12120' => 'bca', 'BcaB03g13945' => 'bca', 'BcaB04g17123' => 'bca', 'BcaB04g17867' => 'bca', 'BcaB04g19839' => 'bca', 'BcaB07g30317' => 'bca', 'BcaB07g32432' => 'bca', 'BcaB07g33362' => 'bca', 'BcaB08g36611' => 'bca', 'BcaC01g00028' => 'bca', 'BcaC01g01356' => 'bca', 'BcaC01g02034' => 'bca', 'BcaC01g06051' => 'bca', 'BcaC03g16839' => 'bca', 'BcaC03g17176' => 'bca', 'BcaC05g26829' => 'bca', 'BcaC06g31490' => 'bca', 'BcaC06g35344' => 'bca', 'BcaC06g36570' => 'bca', 'BcaC07g37537' => 'bca', 'BcaC08g43491' => 'bca', 'BcaC08g43773' => 'bca', 'BcaNung00234' => 'bca', 'BcaNung01982' => 'bca', 'BcaNung03707' => 'bca', 'BcaNung06454' => 'bca', 'BolC2t10762H' => 'bol', 'BolC2t11191H' => 'bol', 'BolC3t14322H' => 'bol', 'BolC3t19747H' => 'bol', 'BolC3t21425H' => 'bol', 'BolC4t27800H' => 'bol', 'BolC5t31423H' => 'bol', 'BolC6t35951H' => 'bol', 'BolC6t36282H' => 'bol', 'BolC7t40678H' => 'bol', 'BolC7t40679H' => 'bol', 'BolC7t42222H' => 'bol', 'BolC7t43492H' => 'bol', 'BolC7t46785H' => 'bol', 'BolC8t47853H' => 'bol', 'BolC9t56805H' => 'bol', 'BraA02t08000Z' => 'bra', 'BraA02t08341Z' => 'bra', 'BraA03t10936Z' => 'bra', 'BraA03t15657Z' => 'bra', 'BraA04t18100Z' => 'bra', 'BraA05t20523Z' => 'bra', 'BraA06t23353Z' => 'bra', 'BraA06t27473Z' => 'bra', 'BraA06t27769Z' => 'bra', 'BraA07t28928Z' => 'bra', 'BraA08t32236Z' => 'bra', 'BraA08t32841Z' => 'bra', 'BraA08t34524Z' => 'bra', 'BraA09t38742Z' => 'bra', 'BraA09t39295Z' => 'bra', 'C02p47180' => 'bna', 'C02p50990' => 'bna', 'C03p19360' => 'bna', 'C03p74950' => 'bna', 'C03p91000' => 'bna', 'C04p63260' => 'bna', 'C05p27050' => 'bna', 'C06p08750' => 'bna', 'C06p11490' => 'bna', 'C07p02820' => 'bna', 'C07p17180' => 'bna', 'C07p29440' => 'bna', 'C07p63730' => 'bna', 'C09p39260' => 'bna', 'CAN.G1164.34' => 'can', 'CAN.G1164.39' => 'can', 'CAN.G1530.3' => 'can', 'CAN.G162.61' => 'can', 'CAN.G176.6' => 'can', 'CAN.G289.49' => 'can', 'CAN.G370.21' => 'can', 'CAN.G370.22' => 'can', 'CAN.G371.117' => 'can', 'CAN.G58.37' => 'can', 'CAN.G588.98' => 'can', 'CANSAT21G2266' => 'cansat', 'CANSAT25G2799' => 'cansat', 'CANSAT35G0862' => 'cansat', 'CANSAT35G1704' => 'cansat', 'CANSAT35G1760' => 'cansat', 'CANSAT56G3971' => 'cansat', 'CANSAT56G4116' => 'cansat', 'CANSAT80G1259' => 'cansat', 'CARHR027730' => 'chi', 'CARHR033880' => 'chi', 'CARHR043270' => 'chi', 'CARHR145330' => 'chi', 'CARHR145340' => 'chi', 'CARHR175570' => 'chi', 'CARHR181570' => 'chi', 'CARHR258470' => 'chi', 'CARHR260490' => 'chi', 'CARHR294220' => 'chi', 'Carub.0001s2668' => 'cru', 'Carub.0001s3257' => 'cru', 'Carub.0001s4220' => 'cru', 'Carub.0005s0179' => 'cru', 'Carub.0006s2807' => 'cru', 'Carub.0007s0039' => 'cru', 'Carub.0008s0169' => 'cru', 'Carub.0008s0636' => 'cru', 'Ca_00338_v3' => 'car', 'Ca_00542_v3' => 'car', 'Ca_01844_v3' => 'car', 'Ca_10611_v3' => 'car', 'Ca_13326_v3' => 'car', 'Ca_17944_v3' => 'car', 'Ca_18546_v3' => 'car', 'Ca_24219_v3' => 'car', 'Ca_29972_v3' => 'car', 'CBR_g3681' => 'cbr', 'CBR_g40021' => 'cbr', 'Cc01_g08140' => 'ccan', 'Cc02_g13410' => 'ccan', 'Cc02_g37480' => 'ccan', 'Cc05_g12030' => 'ccan', 'Cc09_g03370' => 'ccan', 'Cc09_g10300' => 'ccan', 'Cc10_g03530' => 'ccan', 'Cc10_g11380' => 'ccan', 'CDE01G0176' => 'cde', 'CDE02G0675' => 'cde', 'CDE02G0942' => 'cde', 'CDE02G1153' => 'cde', 'CDE02G4177' => 'cde', 'CDE04G2117' => 'cde', 'CDE04G2736' => 'cde', 'CDE08G1161' => 'cde', 'CDE09G1238' => 'cde', 'Cfa000467' => 'cfa', 'Cfa000947' => 'cfa', 'Cfa004969' => 'cfa', 'Cfa005284' => 'cfa', 'Cfa008993' => 'cfa', 'Cfa018187' => 'cfa', 'Cfa018454' => 'cfa', 'Cfa020585' => 'cfa', 'Ciclev10000424m.g' => 'ccl', 'Ciclev10003605m.g' => 'ccl', 'Ciclev10007828m.g' => 'ccl', 'Ciclev10014620m.g' => 'ccl', 'Ciclev10015169m.g' => 'ccl', 'Ciclev10018291m.g' => 'ccl', 'Ciclev10028256m.g' => 'ccl', 'Ciclev10033822m.g' => 'ccl', 'CiPaw.05G060300' => 'cil', 'CiPaw.05G085000' => 'cil', 'CiPaw.06G083700' => 'cil', 'CiPaw.06G120300' => 'cil', 'CiPaw.09G060500' => 'cil', 'CiPaw.09G123800' => 'cil', 'CiPaw.11G169700' => 'cil', 'CiPaw.12G118300' => 'cil', 'CiPaw.15G071000' => 'cil', 'CiPaw.15G081900' => 'cil', 'ClCG01G024610' => 'cla', 'ClCG03G006070' => 'cla', 'ClCG05G019250' => 'cla', 'ClCG09G009500' => 'cla', 'ClCG11G008200' => 'cla', 'ClCG11G018080' => 'cla', 'COL.COLO4_17373' => 'col', 'COL.COLO4_22994' => 'col', 'COL.COLO4_26389' => 'col', 'COL.COLO4_27170' => 'col', 'COL.COLO4_31074' => 'col', 'COL.COLO4_31465' => 'col', 'COL.COLO4_36438' => 'col', 'COL.COLO4_36439' => 'col', 'Cpa.g.c38781' => 'cpa', 'Cpa.g.sc128.12' => 'cpa', 'Cpa.g.sc166.7' => 'cpa', 'Cpa.g.sc166.8' => 'cpa', 'Cpa.g.sc20.111' => 'cpa', 'Cpa.g.sc27.31' => 'cpa', 'Cpa.g.sc64.36' => 'cpa', 'Cpa.g.sc64.37' => 'cpa', 'Cpa.g.sc66.49' => 'cpa', 'Cpa.g.sc80.64' => 'cpa', 'CsaV3_1G012320' => 'csa', 'CsaV3_2G008480' => 'csa', 'CsaV3_2G033450' => 'csa', 'CsaV3_3G044830' => 'csa', 'CsaV3_4G033710' => 'csa', 'CsaV3_6G051730' => 'csa', 'CsaV3_7G025350' => 'csa', 'CSS0001067' => 'camsi', 'CSS0005996' => 'camsi', 'CSS0006590' => 'camsi', 'CSS0009673' => 'camsi', 'CSS0010201' => 'camsi', 'CSS0010549' => 'camsi', 'CSS0011364' => 'camsi', 'CSS0014473' => 'camsi', 'CSS0014961' => 'camsi', 'CSS0020191' => 'camsi', 'CSS0021165' => 'camsi', 'CSS0022306' => 'camsi', 'CSS0030591' => 'camsi', 'CSS0030696' => 'camsi', 'CSS0032653' => 'camsi', 'CSS0037487' => 'camsi', 'CSS0041102' => 'camsi', 'CSS0041261' => 'camsi', 'CSS0046246' => 'camsi', 'CSS0049256' => 'camsi', 'DCAR_004075' => 'dca', 'DCAR_011538' => 'dca', 'DCAR_019553' => 'dca', 'DCAR_020952' => 'dca', 'DCAR_021739' => 'dca', 'DCAR_027407' => 'dca', 'DCAR_027913' => 'dca', 'DCAR_028066' => 'dca', 'Dinv05899' => 'din', 'Dinv07563' => 'din', 'Dinv08010' => 'din', 'Dinv14125' => 'din', 'Dinv20172' => 'din', 'Dinv30743' => 'din', 'Dinv31229' => 'din', 'Dinv34162' => 'din', 'Dinv36028' => 'din', 'Dinv39368' => 'din', 'Dinv40565' => 'din', 'Dinv41706' => 'din', 'Duzib052G0089' => 'dzi', 'Duzib116G0641' => 'dzi', 'Duzib132G0069' => 'dzi', 'Duzib132G1219' => 'dzi', 'Duzib147G0278' => 'dzi', 'Duzib160G0480' => 'dzi', 'Duzib170G0661' => 'dzi', 'Duzib177G0591' => 'dzi', 'Duzib187G1353' => 'dzi', 'Duzib192G0858' => 'dzi', 'Duzib192G0883' => 'dzi', 'Duzib213G0506' => 'dzi', 'Duzib235G0289' => 'dzi', 'Duzib251G0422' => 'dzi', 'ECA232G3898' => 'eca', 'ECA233G5950' => 'eca', 'ECA234G1699' => 'eca', 'ECA234G2421' => 'eca', 'ECA236G0426' => 'eca', 'ECA236G4331' => 'eca', 'ECA248G2573' => 'eca', 'EL10Ac1g00077' => 'bvu', 'EL10Ac1g01746' => 'bvu', 'EL10Ac2g03464' => 'bvu', 'EL10Ac4g08176' => 'bvu', 'EL10Ac7g17521' => 'bvu', 'EL10Ac8g20386' => 'bvu', 'EL10Ac9g21343' => 'bvu', 'EL10Ac9g22688' => 'bvu', 'Eucgr.B03434' => 'egr', 'Eucgr.D00618' => 'egr', 'Eucgr.E02395' => 'egr', 'Eucgr.F01129' => 'egr', 'Eucgr.F02622' => 'egr', 'Eucgr.F04207' => 'egr', 'FAN01G0570' => 'fan', 'FAN03G3351' => 'fan', 'FAN06G3702' => 'fan', 'FAN07G2149' => 'fan', 'FAN10G3758' => 'fan', 'FAN11G1170' => 'fan', 'FAN11G2050' => 'fan', 'FAN11G2724' => 'fan', 'FAN12G1700' => 'fan', 'FAN12G2028' => 'fan', 'FAN15G1160' => 'fan', 'FAN15G3063' => 'fan', 'FAN16G2540' => 'fan', 'FAN16G3077' => 'fan', 'FAN16G3624' => 'fan', 'FAN17G0221' => 'fan', 'FAN20G2492' => 'fan', 'FAN20G2905' => 'fan', 'FAN21G0548' => 'fan', 'FAN21G1300' => 'fan', 'FAN22G0077' => 'fan', 'FAN22G1315' => 'fan', 'FAN24G1280' => 'fan', 'FAN24G1445' => 'fan', 'FAN24G3527' => 'fan', 'FAN25G0464' => 'fan', 'FAN25G2885' => 'fan', 'FAN25G3270' => 'fan', 'FAN27G1101' => 'fan', 'FAN27G2846' => 'fan', 'FAN27G3524' => 'fan', 'FvH4_2g11770' => 'fve', 'FvH4_2g15630' => 'fve', 'FvH4_3g05570' => 'fve', 'FvH4_3g09110' => 'fve', 'FvH4_3g19940' => 'fve', 'FvH4_4g04821' => 'fve', 'FvH4_4g31480' => 'fve', 'FvH4_7g01740' => 'fve', 'Glyma.05G130400' => 'gma', 'Glyma.05G156400' => 'gma', 'Glyma.07G197000' => 'gma', 'Glyma.08G085151' => 'gma', 'Glyma.08G114500' => 'gma', 'Glyma.08G300400' => 'gma', 'Glyma.10G215800' => 'gma', 'Glyma.12G224400' => 'gma', 'Glyma.13G179300' => 'gma', 'Glyma.13G218151' => 'gma', 'Glyma.13G238800' => 'gma', 'Glyma.13G276900' => 'gma', 'Glyma.14G078200' => 'gma', 'Glyma.15G074500' => 'gma', 'Glyma.15G094100' => 'gma', 'Glyma.17G247200' => 'gma', 'Glyma.18G120100' => 'gma', 'Glyma.20G176000' => 'gma', 'Gohir.A01G063600' => 'ghi', 'Gohir.A01G170301' => 'ghi', 'Gohir.A02G060500' => 'ghi', 'Gohir.A05G133850' => 'ghi', 'Gohir.A05G161400' => 'ghi', 'Gohir.A06G012900' => 'ghi', 'Gohir.A06G035901' => 'ghi', 'Gohir.A06G127100' => 'ghi', 'Gohir.A06G210500' => 'ghi', 'Gohir.A08G008650' => 'ghi', 'Gohir.A09G072700' => 'ghi', 'Gohir.A09G088301' => 'ghi', 'Gohir.A10G040600' => 'ghi', 'Gohir.A12G036300' => 'ghi', 'Gohir.A12G143350' => 'ghi', 'Gohir.A12G165500' => 'ghi', 'Gohir.A13G145700' => 'ghi', 'Gohir.D01G050000' => 'ghi', 'Gohir.D01G051366' => 'ghi', 'Gohir.D01G161350' => 'ghi', 'Gohir.D02G065900' => 'ghi', 'Gohir.D05G164200' => 'ghi', 'Gohir.D05G355500' => 'ghi', 'Gohir.D06G010400' => 'ghi', 'Gohir.D06G111250' => 'ghi', 'Gohir.D06G132000' => 'ghi', 'Gohir.D06G210500' => 'ghi', 'Gohir.D07G165675' => 'ghi', 'Gohir.D08G062240' => 'ghi', 'Gohir.D08G086101' => 'ghi', 'Gohir.D08G138060' => 'ghi', 'Gohir.D09G072300' => 'ghi', 'Gohir.D10G041400' => 'ghi', 'Gohir.D11G191020' => 'ghi', 'Gohir.D11G212066' => 'ghi', 'Gohir.D12G036300' => 'ghi', 'Gohir.D12G168600' => 'ghi', 'Gohir.D13G150600' => 'ghi', 'Gorai.001G057300' => 'gra', 'Gorai.002G069900' => 'gra', 'Gorai.002G200000' => 'gra', 'Gorai.003G067600' => 'gra', 'Gorai.005G074800' => 'gra', 'Gorai.006G087300' => 'gra', 'Gorai.008G037500' => 'gra', 'Gorai.008G181400' => 'gra', 'Gorai.009G169400' => 'gra', 'Gorai.009G387900' => 'gra', 'Gorai.010G013300' => 'gra', 'Gorai.010G153800' => 'gra', 'Gorai.010G255800' => 'gra', 'Gorai.011G043700' => 'gra', 'Gorai.011G198900' => 'gra', 'Gorai.013G168400' => 'gra', 'GSVIVG01005212001' => 'vvi', 'GSVIVG01006163001' => 'vvi', 'GSVIVG01009625001' => 'vvi', 'GSVIVG01014338001' => 'vvi', 'GSVIVG01020005001' => 'vvi', 'GSVIVG01021450001' => 'vvi', 'GSVIVG01023975001' => 'vvi', 'GSVIVG01034490001' => 'vvi', 'HanXRQChr04g0112071' => 'han', 'HanXRQChr05g0131151' => 'han', 'HanXRQChr09g0262371' => 'han', 'HanXRQChr09g0268401' => 'han', 'HanXRQChr10g0279241' => 'han', 'HanXRQChr10g0297961' => 'han', 'HanXRQChr11g0326231' => 'han', 'HanXRQChr11g0328471' => 'han', 'HanXRQChr16g0507941' => 'han', 'HanXRQChr17g0560211' => 'han', 'Haze_02108' => 'cav', 'Haze_02428' => 'cav', 'Haze_05593' => 'cav', 'Haze_06448' => 'cav', 'Haze_09427' => 'cav', 'Haze_12022' => 'cav', 'Haze_17612' => 'cav', 'Haze_17928' => 'cav', 'Hma1.2p1_0032F.1_g019250' => 'hma', 'Hma1.2p1_0163F.1_g072690' => 'hma', 'Hma1.2p1_0265F.1_g106710' => 'hma', 'Hma1.2p1_0286F.1_g113970' => 'hma', 'Hma1.2p1_0363F.1_g136640' => 'hma', 'Hma1.2p1_0584F.1_g183470' => 'hma', 'Hma1.2p1_0885F.1_g232570' => 'hma', 'HPP92_006022' => 'vpl', 'HPP92_007320' => 'vpl', 'HPP92_011521' => 'vpl', 'HPP92_019387' => 'vpl', 'HPP92_024038' => 'vpl', 'Hund05891' => 'sun', 'Hund06450' => 'sun', 'Hund12053' => 'sun', 'Hund16800' => 'sun', 'Hund21222' => 'sun', 'Hund22896' => 'sun', 'Hund23746' => 'sun', 'Hund27083' => 'sun', 'Lalb_Chr02g0141831' => 'lal', 'Lalb_Chr02g0141841' => 'lal', 'Lalb_Chr05g0220411' => 'lal', 'Lalb_Chr06g0162081' => 'lal', 'Lalb_Chr09g0327651' => 'lal', 'Lalb_Chr13g0295051' => 'lal', 'Lalb_Chr15g0086801' => 'lal', 'Lalb_Chr16g0383781' => 'lal', 'Lalb_Chr16g0383791' => 'lal', 'Lalb_Chr18g0055441' => 'lal', 'Lalb_Chr18g0059611' => 'lal', 'Lalb_Chr20g0109661' => 'lal', 'Lalb_Chr20g0109831' => 'lal', 'Lalb_Chr20g0121871' => 'lal', 'Lalb_Chr22g0355361' => 'lal', 'Lalb_Chr25g0286371' => 'lal', 'Lj1A1187G43' => 'lonja', 'Lj1A1205T50' => 'lonja', 'Lj1A800G33' => 'lonja', 'Lj1C1187T7' => 'lonja', 'Lj1C843T11' => 'lonja', 'Lj1g0010940' => 'lja', 'Lj2A288T69' => 'lonja', 'Lj3g0024276' => 'lja', 'Lj4A47T76' => 'lonja', 'Lj4g0005805' => 'lja', 'Lj4g0006097' => 'lja', 'Lj4g0008528' => 'lja', 'Lj4g0024907' => 'lja', 'Lj5g0012472' => 'lja', 'Lj5g0018648' => 'lja', 'Lj6C789G1' => 'lonja', 'Lj6g0004000' => 'lja', 'Lj7A292G67' => 'lonja', 'Lj7A292T64' => 'lonja', 'Lj9A400T58' => 'lonja', 'Lsat_1_v5_gn_1_126181' => 'lsa', 'Lsat_1_v5_gn_4_123041' => 'lsa', 'Lsat_1_v5_gn_4_133620' => 'lsa', 'Lsat_1_v5_gn_4_53221' => 'lsa', 'Lsat_1_v5_gn_4_71961' => 'lsa', 'Lsat_1_v5_gn_7_105241' => 'lsa', 'Lsat_1_v5_gn_7_21361' => 'lsa', 'Lsat_1_v5_gn_7_28860' => 'lsa', 'Lsat_1_v5_gn_7_31260' => 'lsa', 'Lsat_1_v5_gn_8_52801' => 'lsa', 'Manes.02G191400' => 'mes', 'Manes.03G110100' => 'mes', 'Manes.04G071100' => 'mes', 'Manes.05G100500' => 'mes', 'Manes.05G164700' => 'mes', 'Manes.15G087000' => 'mes', 'Manes.15G121500' => 'mes', 'Manes.16G028300' => 'mes', 'Manes.17G046100' => 'mes', 'Manes.17G069800' => 'mes', 'Manes.18G100500' => 'mes', 'Mapoly0002s0109' => 'mpo', 'Mapoly0024s0007' => 'mpo', 'Mapoly0089s0032' => 'mpo', 'MBI04_g42241_MAGBIO' => 'mbi', 'MBI05_g11988_MAGBIO' => 'mbi', 'MBI05_g35452_MAGBIO' => 'mbi', 'MBI07_g30179_MAGBIO' => 'mbi', 'MBI07_g35859_MAGBIO' => 'mbi', 'MBI07_g35860_MAGBIO' => 'mbi', 'MBI07_g37166_MAGBIO' => 'mbi', 'MBI08_g18172_MAGBIO' => 'mbi', 'MBI09_g08441_MAGBIO' => 'mbi', 'MBI13_g01676_MAGBIO' => 'mbi', 'MBI14_g42955_MAGBIO' => 'mbi', 'MBI16_g13161_MAGBIO' => 'mbi', 'MBI17_g27204_MAGBIO' => 'mbi', 'MBI19_g21595_MAGBIO' => 'mbi', 'MD00G1148400' => 'mdo', 'MD02G1301200' => 'mdo', 'MD03G1227800' => 'mdo', 'MD05G1041100' => 'mdo', 'MD05G1124800' => 'mdo', 'MD05G1284000' => 'mdo', 'MD05G1338800' => 'mdo', 'MD05G1338900' => 'mdo', 'MD07G1022800' => 'mdo', 'MD10G1047500' => 'mdo', 'MD10G1127500' => 'mdo', 'MD10G1262300' => 'mdo', 'MD10G1293800' => 'mdo', 'MD16G1074300' => 'mdo', 'Medtr1g021670' => 'mtr', 'Medtr1g096320' => 'mtr', 'Medtr2g013690' => 'mtr', 'Medtr2g019450' => 'mtr', 'Medtr2g085170' => 'mtr', 'Medtr4g088785' => 'mtr', 'Medtr8g055930' => 'mtr', 'Medtr8g085850' => 'mtr', 'MELO3C002605.2' => 'cme', 'MELO3C003891.2' => 'cme', 'MELO3C004012.2' => 'cme', 'MELO3C007134.2' => 'cme', 'MELO3C008118.2' => 'cme', 'MELO3C016700.2' => 'cme', 'MELO3C024127.2' => 'cme', 'MELO3C033361.2' => 'cme', 'MELO3C033362.2' => 'cme', 'Migut.C00430' => 'egut', 'Migut.C01246' => 'egut', 'Migut.E00101' => 'egut', 'Migut.H01486' => 'egut', 'Migut.H01939' => 'egut', 'Migut.K00360' => 'egut', 'Migut.M00910' => 'egut', 'Migut.M01139' => 'egut', 'Migut.N02677' => 'egut', 'MSTRG.13252' => 'ama', 'MSTRG.14701' => 'ama', 'MSTRG.1521' => 'ama', 'MSTRG.15884' => 'ama', 'MSTRG.16242' => 'ama', 'MSTRG.22285' => 'ama', 'MSTRG.22444' => 'ama', 'MSTRG.2349' => 'ama', 'MSTRG.26308' => 'ama', 'MSTRG.28296' => 'ama', 'MSTRG.9895' => 'ama', 'Nitab4.5_0000110g0060' => 'nta', 'Nitab4.5_0000420g0130' => 'nta', 'Nitab4.5_0000422g0030' => 'nta', 'Nitab4.5_0000560g0180' => 'nta', 'Nitab4.5_0000703g0100' => 'nta', 'Nitab4.5_0000786g0200' => 'nta', 'Nitab4.5_0001336g0020' => 'nta', 'Nitab4.5_0001796g0030' => 'nta', 'Nitab4.5_0003348g0060' => 'nta', 'Nitab4.5_0003698g0040' => 'nta', 'Nitab4.5_0003942g0090' => 'nta', 'Nitab4.5_0004775g0070' => 'nta', 'Nitab4.5_0004864g0030' => 'nta', 'Nitab4.5_0005615g0020' => 'nta', 'Nitab4.5_0009288g0030' => 'nta', 'Nitab4.5_0009341g0010' => 'nta', 'Nitab4.5_0009535g0010' => 'nta', 'Nn1g03995' => 'nnu', 'Nn1g04100' => 'nnu', 'Nn1g06530' => 'nnu', 'Nn3g16404' => 'nnu', 'Nn3g17212' => 'nnu', 'Nn3g20776' => 'nnu', 'Nn3g21923' => 'nnu', 'Nn5g27737' => 'nnu', 'Nn5g29461' => 'nnu', 'Nn7g38355' => 'nnu', 'Nn8g39873' => 'nnu', 'Oeu000548.2' => 'oeu', 'Oeu004672.1' => 'oeu', 'Oeu015605.2' => 'oeu', 'Oeu016092.1' => 'oeu', 'Oeu017879.3' => 'oeu', 'Oeu024910.1' => 'oeu', 'Oeu028965.1' => 'oeu', 'Oeu031269.1' => 'oeu', 'Oeu031270.1' => 'oeu', 'Oeu032535.1' => 'oeu', 'Oeu034151.1' => 'oeu', 'Oeu034152.1' => 'oeu', 'Oeu034588.2' => 'oeu', 'Oeu050846.1' => 'oeu', 'Oeu050849.2' => 'oeu', 'Oeu051063.2' => 'oeu', 'Oeu052368.1' => 'oeu', 'Oeu052370.1' => 'oeu', 'Os01g0210400' => 'osa', 'Os01g0304300' => 'osa', 'Os01g0749100' => 'osa', 'Os02g0745800' => 'osa', 'Os03g0769050' => 'osa', 'Os05g0531500' => 'osa', 'Os06g0724300' => 'osa', 'Os11g0198100' => 'osa', 'Peaxi162Scf00069g01425' => 'pax', 'Peaxi162Scf00280g00811' => 'pax', 'Peaxi162Scf00310g00615' => 'pax', 'Peaxi162Scf00362g00542' => 'pax', 'Peaxi162Scf00461g00310' => 'pax', 'Peaxi162Scf00530g00118' => 'pax', 'Peaxi162Scf00541g00057' => 'pax', 'Peaxi162Scf00661g00017' => 'pax', 'Peaxi162Scf00926g00027' => 'pax', 'Peaxi162Scf01064g00263' => 'pax', 'Peaxi162Scf01211g00135' => 'pax', 'PGR004G2336' => 'pgr', 'PGR042G0327' => 'pgr', 'PGR042G1957' => 'pgr', 'PGR042G2003' => 'pgr', 'PGR042G3929' => 'pgr', 'PGR083G1137' => 'pgr', 'PGR083G1364' => 'pgr', 'PGSC0003DMG400003381' => 'stu', 'PGSC0003DMG400003417' => 'stu', 'PGSC0003DMG400008981' => 'stu', 'PGSC0003DMG400012417' => 'stu', 'PGSC0003DMG400012823' => 'stu', 'PGSC0003DMG400016885' => 'stu', 'PGSC0003DMG400022812' => 'stu', 'PGSC0003DMG400029726' => 'stu', 'PGSC0003DMG401009243' => 'stu', 'PGSC0003DMG401031505' => 'stu', 'PGSC0003DMG402031505' => 'stu', 'Phvul.001G017600' => 'pvu', 'Phvul.002G193500' => 'pvu', 'Phvul.002G228900' => 'pvu', 'Phvul.002G236800' => 'pvu', 'Phvul.003G049500' => 'pvu', 'Phvul.005G072000' => 'pvu', 'Phvul.006G164800' => 'pvu', 'Phvul.006G185100' => 'pvu', 'Phvul.007G090000' => 'pvu', 'Potri.001G399800' => 'ptr', 'Potri.002G149900' => 'ptr', 'Potri.004G044100' => 'ptr', 'Potri.004G177600' => 'ptr', 'Potri.009G138000' => 'ptr', 'Potri.010G094000' => 'ptr', 'Potri.011G053000' => 'ptr', 'Potri.011G119300' => 'ptr', 'Potri.013G113700' => 'ptr', 'Potri.018G107800' => 'ptr', 'Potri.019G084100' => 'ptr', 'Pp3c14_23720' => 'ppa', 'Pp3c16_6340' => 'ppa', 'Pp3c23_13420' => 'ppa', 'Pp3c24_2740' => 'ppa', 'Pp3c25_860' => 'ppa', 'Pp3c8_21750' => 'ppa', 'Prupe.1G273000' => 'ppe', 'Prupe.1G273700' => 'ppe', 'Prupe.1G274100' => 'ppe', 'Prupe.2G023300' => 'ppe', 'Prupe.4G048000' => 'ppe', 'Prupe.4G080400' => 'ppe', 'Prupe.4G181200' => 'ppe', 'Prupe.8G056900' => 'ppe', 'Prupe.8G168700' => 'ppe', 'Psat1g189080' => 'psa', 'Psat1g204760' => 'psa', 'Psat4g175560' => 'psa', 'Psat4g177720' => 'psa', 'Psat5g244240' => 'psa', 'Psat6g010720' => 'psa', 'Psat6g187200' => 'psa', 'Psat7g072040' => 'psa', 'PSO017G3501' => 'pso', 'PSO063G2148' => 'pso', 'PSO063G5608' => 'pso', 'PSO210G6392' => 'pso', 'PSO541G2319' => 'pso', 'PSO541G2836' => 'pso', 'PSO541G4012' => 'pso', 'PSO541G6253' => 'pso', 'PSO675G0580' => 'pso', 'PSO675G0856' => 'pso', 'PSO675G5635' => 'pso', 'PSO675G9157' => 'pso', 'PSO832G1660' => 'pso', 'PSO832G1969' => 'pso', 'QL02p007186' => 'qlo', 'QL02p033904' => 'qlo', 'QL03p064391' => 'qlo', 'QL05p040593' => 'qlo', 'QL05p058242' => 'qlo', 'QL08p021825' => 'qlo', 'QL11p004981' => 'qlo', 'RcHm_v2.0_Chr1g0318301' => 'rch', 'RcHm_v2.0_Chr4g0418501' => 'rch', 'RcHm_v2.0_Chr4g0439971' => 'rch', 'RcHm_v2.0_Chr5g0008541' => 'rch', 'RcHm_v2.0_Chr5g0014101' => 'rch', 'RcHm_v2.0_Chr5g0014131' => 'rch', 'RcHm_v2.0_Chr5g0033621' => 'rch', 'RcHm_v2.0_Chr6g0272041' => 'rch', 'RcHm_v2.0_Chr6g0278831' => 'rch', 'Rhsim02G0130400' => 'rsi', 'Rhsim02G0171100' => 'rsi', 'Rhsim05G0053000' => 'rsi', 'Rhsim05G0053100' => 'rsi', 'Rhsim06G0096500' => 'rsi', 'Rhsim06G0096600' => 'rsi', 'Rhsim06G0199100' => 'rsi', 'Rhsim12G0062300' => 'rsi', 'Rhsim12G0062800' => 'rsi', 'Sabra02G0118600' => 'sbr', 'Sabra04G0027300' => 'sbr', 'Sabra04G0119500' => 'sbr', 'Sabra08G0112500' => 'sbr', 'Sabra11G0036800' => 'sbr', 'Sabra11G0103800' => 'sbr', 'Sabra13G0096300' => 'sbr', 'Sabra16G0262300' => 'sbr', 'Sabra18G0091700' => 'sbr', 'Sabra19G0095400' => 'sbr', 'SalBow6G3080' => 'sbo', 'SalBow7G1157' => 'sbo', 'SalBow7G2123' => 'sbo', 'SalBow7G2285' => 'sbo', 'SalBow7G3537' => 'sbo', 'SalBow8G2947' => 'sbo', 'SalBow8G4463' => 'sbo', 'SalBow8G5466' => 'sbo', 'Sc01g0001750' => 'sci', 'Sc02g0006640' => 'sci', 'Sc02g0006670' => 'sci', 'Sc04g0008220' => 'sci', 'Sc05g0006190' => 'sci', 'Sc08g0002760' => 'sci', 'Sc17g0006170' => 'sci', 'Sc22g0002050' => 'sci', 'Sc23g0001190' => 'sci', 'Sc24g0000980' => 'sci', 'Sed0006245' => 'sed', 'Sed0007543' => 'sed', 'Sed0009411' => 'sed', 'Sed0010765' => 'sed', 'Sed0012944' => 'sed', 'Sed0014682' => 'sed', 'Sed0016174' => 'sed', 'Sed0016796' => 'sed', 'Sed0020317' => 'sed', 'Sed0021467' => 'sed', 'SEGI_01316' => 'sgi', 'SEGI_03374' => 'sgi', 'SEGI_16265' => 'sgi', 'SEGI_18569' => 'sgi', 'SEGI_20351' => 'sgi', 'SEGI_26395' => 'sgi', 'SEGI_29469' => 'sgi', 'SEGI_34771' => 'sgi', 'SEGI_36769' => 'sgi', 'SEGI_37139' => 'sgi', 'SGA_v2.0_scaffold100G29687' => 'sas', 'SGA_v2.0_scaffold118G32472' => 'sas', 'SGA_v2.0_scaffold14G07051' => 'sas', 'SGA_v2.0_scaffold183G39845' => 'sas', 'SGA_v2.0_scaffold1G00174' => 'sas', 'SGA_v2.0_scaffold22G09714' => 'sas', 'SGA_v2.0_scaffold333G48992' => 'sas', 'SGA_v2.0_scaffold46G17491' => 'sas', 'SGA_v2.0_scaffold49G18294' => 'sas', 'SGA_v2.0_scaffold63G21658' => 'sas', 'SHI01741' => 'shi', 'SHI05771' => 'shi', 'SHI18077' => 'shi', 'SHI20525' => 'shi', 'SHI20527' => 'shi', 'SHI20528' => 'shi', 'SMO172G0185' => 'smo', 'SMO198G0020' => 'smo', 'SMO351G0006' => 'smo', 'SMO356G0118' => 'smo', 'SMO358G0296' => 'smo', 'SMO367G0079' => 'smo', 'SMO367G1277' => 'smo', 'Solyc01g014220.3' => 'sly', 'Solyc01g111770.2' => 'sly', 'Solyc02g078180.3' => 'sly', 'Solyc03g006430.3' => 'sly', 'Solyc03g006456.1' => 'sly', 'Solyc03g079860.2' => 'sly', 'Solyc04g079770.3' => 'sly', 'Solyc05g007430.4' => 'sly', 'Solyc07g063150.3' => 'sly', 'Solyc08g016620.3' => 'sly', 'Solyc09g057590.3' => 'sly', 'Solyc09g057600.1' => 'sly', 'Solyc10g009050.3' => 'sly', 'Solyc11g017420.2' => 'sly', 'Sopen01g053810' => 'spe', 'Sopen02g023040' => 'spe', 'Sopen03g002440' => 'spe', 'Sopen04g033350' => 'spe', 'Sopen05g003310' => 'spe', 'Sopen07g004050' => 'spe', 'Sopen07g031340' => 'spe', 'Sopen08g006990' => 'spe', 'Sopen10g004830' => 'spe', 'Sopen11g009370' => 'spe', 'Sp1g24450' => 'spa', 'Sp1g29670' => 'spa', 'Sp1g39600' => 'spa', 'Sp2g11080' => 'spa', 'Sp2g13970' => 'spa', 'Sp4g16130' => 'spa', 'Sp6g13080' => 'spa', 'Sp7g37270' => 'spa', 'TAR371G0065' => 'tar', 'TAR376G0340' => 'tar', 'TAR376G0435' => 'tar', 'TAR381G0002' => 'tar', 'TAR381G1236' => 'tar', 'TAR624G0055' => 'tar', 'TAR624G0324' => 'tar', 'TAR624G0696' => 'tar', 'TAR624G0906' => 'tar', 'TAR625G0107' => 'tar', 'TAR626G0015' => 'tar', 'TAR626G1356' => 'tar', 'TAR627G0888' => 'tar', 'TAR628G0399' => 'tar', 'TAR628G1327' => 'tar', 'TAR629G2831' => 'tar', 'TAR629G2874' => 'tar', 'TAR633G1432' => 'tar', 'TAR633G2771' => 'tar', 'THA.LOC104803394' => 'tha', 'THA.LOC104805153' => 'tha', 'THA.LOC104806784' => 'tha', 'THA.LOC104810473' => 'tha', 'THA.LOC104813100' => 'tha', 'THA.LOC104814215' => 'tha', 'THA.LOC104815554' => 'tha', 'THA.LOC104820544' => 'tha', 'THA.LOC104824754' => 'tha', 'THA.LOC104827717' => 'tha', 'Thecc.02G031400' => 'tca', 'Thecc.02G055900' => 'tca', 'Thecc.02G350800' => 'tca', 'Thecc.06G150900' => 'tca', 'Thecc.06G186600' => 'tca', 'Thecc.07G089600' => 'tca', 'Thecc.08G020400' => 'tca', 'Thecc.08G182100' => 'tca', 'Thhalv10000873m.g' => 'esa', 'Thhalv10004185m.g' => 'esa', 'Thhalv10006981m.g' => 'esa', 'Thhalv10007204m.g' => 'esa', 'Thhalv10011374m.g' => 'esa', 'Thhalv10013482m.g' => 'esa', 'Thhalv10017801m.g' => 'esa', 'Thhalv10024983m.g' => 'esa', 'TPR.G12072' => 'tpr', 'TPR.G15769' => 'tpr', 'TPR.G16504' => 'tpr', 'TPR.G16506' => 'tpr', 'TPR.G24345' => 'tpr', 'TPR.G26666' => 'tpr', 'TPR.G27320' => 'tpr', 'TPR.G31819' => 'tpr', 'TPR.G38879' => 'tpr', 'TPR.G39015' => 'tpr', 'TPR.G8819' => 'tpr', 'TWI09G0924' => 'twi', 'TWI12G0811' => 'twi', 'TWI12G1294' => 'twi', 'TWI31G0150' => 'twi', 'TWI36G1262' => 'twi', 'TWI38G1287' => 'twi', 'TWI38G1633' => 'twi', 'TWI38G1982' => 'twi', 'TWI39G0116' => 'twi', 'TWI60G1011' => 'twi', 'TWI63G0171' => 'twi', 'TWI73G0839' => 'twi', 'TWI79G1511' => 'twi', 'unitig_0.g915' => 'ugi', 'unitig_0.g916' => 'ugi', 'unitig_21.g20219' => 'ugi', 'unitig_21.g20416' => 'ugi', 'unitig_578.g16132' => 'ugi', 'unitig_578.g16718' => 'ugi', 'unitig_62.g23481' => 'ugi', 'unitig_744.g24535' => 'ugi', 'unitig_749.g13525' => 'ugi', 'vmacro01248' => 'vma', 'vmacro02290' => 'vma', 'vmacro10946' => 'vma', 'vmacro11865' => 'vma', 'vmacro12493' => 'vma', 'vmacro17322' => 'vma', 'vmacro21599' => 'vma', 'vmacro23041' => 'vma', 'VMungo0251G0004' => 'vmu', 'VMungo0251G2639' => 'vmu', 'VMungo0251G2967' => 'vmu', 'VMungo0540G0864' => 'vmu', 'VMungo0540G1569' => 'vmu', 'VMungo0647G0317' => 'vmu', 'VMungo0720G1373' => 'vmu', 'VMungo0720G1508' => 'vmu', 'VMungo1080G0485' => 'vmu', 'VMungo1215G3177' => 'vmu', 'Zm00001eb112600' => 'zma', 'Zm00001eb120220' => 'zma', 'Zm00001eb153240' => 'zma', 'Zm00001eb168880' => 'zma', 'Zm00001eb213920' => 'zma', 'Zm00001eb228280' => 'zma', 'Zm00001eb254580' => 'zma', 'Zm00001eb272180' => 'zma', 'Zm00001eb293190' => 'zma', 'Zm00001eb322930' => 'zma', 'Zm00001eb353360' => 'zma', 'Zm00001eb353390' => 'zma', 'Zm00001eb353430' => 'zma', 'Zm00001eb353440' => 'zma', 'Zm00001eb353780' => 'zma' ) $gf_id = 'HOM05D000499' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000499' ) $data_identifier = 'HOM05D000499' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 29, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 12, 'amhyb' => (int) 8, 'aly' => (int) 12, 'aox' => (int) 9, 'arhy' => (int) 26, 'ath' => (int) 8, 'atr' => (int) 7, 'acertr' => (int) 10, 'cqu' => (int) 15, 'bca' => (int) 29, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 11, 'cansat' => (int) 8, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 9, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 8, 'cpa' => (int) 10, 'csa' => (int) 7, 'camsi' => (int) 20, 'dca' => (int) 8, 'din' => (int) 12, 'dzi' => (int) 14, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 6, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 38, 'gra' => (int) 16, 'vvi' => (int) 8, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 5, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 11, 'lja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 11, 'mpo' => (int) 3, 'mbi' => (int) 14, 'mdo' => (int) 14, 'mtr' => (int) 8, 'cme' => (int) 9, 'egut' => (int) 9, 'ama' => (int) 11, 'nta' => (int) 17, 'nnu' => (int) 11, 'oeu' => (int) 18, 'osa' => (int) 8, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 6, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 9, 'rsi' => (int) 9, 'sbr' => (int) 10, 'sbo' => (int) 8, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 10, 'sas' => (int) 10, 'shi' => (int) 6, 'smo' => (int) 7, 'sly' => (int) 14, 'spe' => (int) 10, 'spa' => (int) 8, 'tar' => (int) 19, 'tha' => (int) 10, 'tca' => (int) 8, 'esa' => (int) 8, 'tpr' => (int) 11, 'twi' => (int) 13, 'ugi' => (int) 9, 'vma' => (int) 8, 'vmu' => (int) 10, 'zma' => (int) 15 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb353780' $species_info = array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ) $local_species = 'bna' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000499', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1066', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p29780' => 'bna', 'A02p33180' => 'bna', 'A03p16470' => 'bna', 'A03p66010' => 'bna', 'A04p25970' => 'bna', 'A06p01270' => 'bna', 'A06p46080' => 'bna', 'A07p11400' => 'bna', 'A08p01840' => 'bna', 'A08p08230' => 'bna', 'A08p25740' => 'bna', 'A09p32070' => 'bna', 'A09p37830' => 'bna', 'A09p42840' => 'bna', 'A09p42850' => 'bna', 'Aa31LG10G2060' => 'aar', 'Aa31LG2G7410' => 'aar', 'Aa31LG6G10200' => 'aar', 'Aa31LG6G16680' => 'aar', 'Aa31LG6G8470' => 'aar', 'Aa31LG9G12730' => 'aar', 'Aa31LG9G13680' => 'aar', 'Aa31LG9G14920' => 'aar', 'Aa31LG9G6650' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4977' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5467' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3254' => 'aag', 'Actinidia02578' => 'ach', 'Actinidia07693' => 'ach', 'Actinidia08413' => 'ach', 'Actinidia08414' => 'ach', 'Actinidia15289' => 'ach', 'Actinidia19871' => 'ach', 'Actinidia21475' => 'ach', 'Actinidia22576' => 'ach', 'Actinidia28327' => 'ach', 'Actinidia32491' => 'ach', 'Actinidia39463' => 'ach', 'Actinidia39571' => 'ach', 'Ah.01g013750' => 'amhyb', 'Ah.01g023210' => 'amhyb', 'Ah.04g164850' => 'amhyb', 'Ah.05g178060' => 'amhyb', 'Ah.07g204270' => 'amhyb', 'Ah.07g208480' => 'amhyb', 'Ah.09g237410' => 'amhyb', 'Ah.14g089460' => 'amhyb', 'AL1G41790' => 'aly', 'AL1G49050' => 'aly', 'AL1G53810' => 'aly', 'AL1G61400' => 'aly', 'AL4G18580' => 'aly', 'AL5G12510' => 'aly', 'AL5G12540' => 'aly', 'AL6G43230' => 'aly', 'AL7G10370' => 'aly', 'AL7G19250' => 'aly', 'AL8G12240' => 'aly', 'AL8G18540' => 'aly', 'Aqoxy1G02409' => 'aox', 'Aqoxy2G03993' => 'aox', 'Aqoxy3G03357' => 'aox', 'Aqoxy4G00785' => 'aox', 'Aqoxy5G02598' => 'aox', 'Aqoxy6G00132' => 'aox', 'Aqoxy7G01776' => 'aox', 'Aqoxy7G02316' => 'aox', 'Aqoxy7G03973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.12AFKW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B8730' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27IQR1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3F75VG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3RE0GA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41TCQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.527VTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FIR39' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5W8UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DA38EV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ63HS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H1I32C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HC27T5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4M8AP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7N3CZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9UVDZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LS1NQA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT1D4B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SKC4TM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCFV76' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF9Q1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQWD9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1ZM88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WE07RT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YCK7VH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJE6Q6' => 'arhy', 'AT1G28240' => 'ath', 'AT1G34550' => 'ath', 'AT1G53040' => 'ath', 'AT2G02910' => 'ath', 'AT4G09630' => 'ath', 'AT4G38500' => 'ath', 'AT5G42660' => 'ath', 'AT5G46220' => 'ath', 'ATR0152G026' => 'atr', 'ATR0564G343' => 'atr', 'ATR0706G151' => 'atr', 'ATR0733G207' => 'atr', 'ATR0751G234' => 'atr', 'ATR0807G048' => 'atr', 'ATR1091G084' => 'atr', 'Atru.chr10.1229' => 'acertr', 'Atru.chr10.1230' => 'acertr', 'Atru.chr10.1874' => 'acertr', 'Atru.chr11.1808' => 'acertr', 'Atru.chr13.1795' => 'acertr', 'Atru.chr13.570' => 'acertr', 'Atru.chr2.2608' => 'acertr', 'Atru.chr2.2609' => 'acertr', 'Atru.chr5.3428' => 'acertr', 'Atru.chr8.1171' => 'acertr', 'AUR62004651' => 'cqu', 'AUR62008675' => 'cqu', 'AUR62010014' => 'cqu', 'AUR62013004' => 'cqu', 'AUR62014825' => 'cqu', 'AUR62015015' => 'cqu', 'AUR62015151' => 'cqu', 'AUR62017020' => 'cqu', 'AUR62019422' => 'cqu', 'AUR62023570' => 'cqu', 'AUR62025571' => 'cqu', 'AUR62029098' => 'cqu', 'AUR62033863' => 'cqu', 'AUR62034296' => 'cqu', 'AUR62040075' => 'cqu', 'BcaB02g07334' => 'bca', 'BcaB02g10575' => 'bca', 'BcaB03g12119' => 'bca', 'BcaB03g12120' => 'bca', 'BcaB03g13945' => 'bca', 'BcaB04g17123' => 'bca', 'BcaB04g17867' => 'bca', 'BcaB04g19839' => 'bca', 'BcaB07g30317' => 'bca', 'BcaB07g32432' => 'bca', 'BcaB07g33362' => 'bca', 'BcaB08g36611' => 'bca', 'BcaC01g00028' => 'bca', 'BcaC01g01356' => 'bca', 'BcaC01g02034' => 'bca', 'BcaC01g06051' => 'bca', 'BcaC03g16839' => 'bca', 'BcaC03g17176' => 'bca', 'BcaC05g26829' => 'bca', 'BcaC06g31490' => 'bca', 'BcaC06g35344' => 'bca', 'BcaC06g36570' => 'bca', 'BcaC07g37537' => 'bca', 'BcaC08g43491' => 'bca', 'BcaC08g43773' => 'bca', 'BcaNung00234' => 'bca', 'BcaNung01982' => 'bca', 'BcaNung03707' => 'bca', 'BcaNung06454' => 'bca', 'BolC2t10762H' => 'bol', 'BolC2t11191H' => 'bol', 'BolC3t14322H' => 'bol', 'BolC3t19747H' => 'bol', 'BolC3t21425H' => 'bol', 'BolC4t27800H' => 'bol', 'BolC5t31423H' => 'bol', 'BolC6t35951H' => 'bol', 'BolC6t36282H' => 'bol', 'BolC7t40678H' => 'bol', 'BolC7t40679H' => 'bol', 'BolC7t42222H' => 'bol', 'BolC7t43492H' => 'bol', 'BolC7t46785H' => 'bol', 'BolC8t47853H' => 'bol', 'BolC9t56805H' => 'bol', 'BraA02t08000Z' => 'bra', 'BraA02t08341Z' => 'bra', 'BraA03t10936Z' => 'bra', 'BraA03t15657Z' => 'bra', 'BraA04t18100Z' => 'bra', 'BraA05t20523Z' => 'bra', 'BraA06t23353Z' => 'bra', 'BraA06t27473Z' => 'bra', 'BraA06t27769Z' => 'bra', 'BraA07t28928Z' => 'bra', 'BraA08t32236Z' => 'bra', 'BraA08t32841Z' => 'bra', 'BraA08t34524Z' => 'bra', 'BraA09t38742Z' => 'bra', 'BraA09t39295Z' => 'bra', 'C02p47180' => 'bna', 'C02p50990' => 'bna', 'C03p19360' => 'bna', 'C03p74950' => 'bna', 'C03p91000' => 'bna', 'C04p63260' => 'bna', 'C05p27050' => 'bna', 'C06p08750' => 'bna', 'C06p11490' => 'bna', 'C07p02820' => 'bna', 'C07p17180' => 'bna', 'C07p29440' => 'bna', 'C07p63730' => 'bna', 'C09p39260' => 'bna', 'CAN.G1164.34' => 'can', 'CAN.G1164.39' => 'can', 'CAN.G1530.3' => 'can', 'CAN.G162.61' => 'can', 'CAN.G176.6' => 'can', 'CAN.G289.49' => 'can', 'CAN.G370.21' => 'can', 'CAN.G370.22' => 'can', 'CAN.G371.117' => 'can', 'CAN.G58.37' => 'can', 'CAN.G588.98' => 'can', 'CANSAT21G2266' => 'cansat', 'CANSAT25G2799' => 'cansat', 'CANSAT35G0862' => 'cansat', 'CANSAT35G1704' => 'cansat', 'CANSAT35G1760' => 'cansat', 'CANSAT56G3971' => 'cansat', 'CANSAT56G4116' => 'cansat', 'CANSAT80G1259' => 'cansat', 'CARHR027730' => 'chi', 'CARHR033880' => 'chi', 'CARHR043270' => 'chi', 'CARHR145330' => 'chi', 'CARHR145340' => 'chi', 'CARHR175570' => 'chi', 'CARHR181570' => 'chi', 'CARHR258470' => 'chi', 'CARHR260490' => 'chi', 'CARHR294220' => 'chi', 'Carub.0001s2668' => 'cru', 'Carub.0001s3257' => 'cru', 'Carub.0001s4220' => 'cru', 'Carub.0005s0179' => 'cru', 'Carub.0006s2807' => 'cru', 'Carub.0007s0039' => 'cru', 'Carub.0008s0169' => 'cru', 'Carub.0008s0636' => 'cru', 'Ca_00338_v3' => 'car', 'Ca_00542_v3' => 'car', 'Ca_01844_v3' => 'car', 'Ca_10611_v3' => 'car', 'Ca_13326_v3' => 'car', 'Ca_17944_v3' => 'car', 'Ca_18546_v3' => 'car', 'Ca_24219_v3' => 'car', 'Ca_29972_v3' => 'car', 'CBR_g3681' => 'cbr', 'CBR_g40021' => 'cbr', 'Cc01_g08140' => 'ccan', 'Cc02_g13410' => 'ccan', 'Cc02_g37480' => 'ccan', 'Cc05_g12030' => 'ccan', 'Cc09_g03370' => 'ccan', 'Cc09_g10300' => 'ccan', 'Cc10_g03530' => 'ccan', 'Cc10_g11380' => 'ccan', 'CDE01G0176' => 'cde', 'CDE02G0675' => 'cde', 'CDE02G0942' => 'cde', 'CDE02G1153' => 'cde', 'CDE02G4177' => 'cde', 'CDE04G2117' => 'cde', 'CDE04G2736' => 'cde', 'CDE08G1161' => 'cde', 'CDE09G1238' => 'cde', 'Cfa000467' => 'cfa', 'Cfa000947' => 'cfa', 'Cfa004969' => 'cfa', 'Cfa005284' => 'cfa', 'Cfa008993' => 'cfa', 'Cfa018187' => 'cfa', 'Cfa018454' => 'cfa', 'Cfa020585' => 'cfa', 'Ciclev10000424m.g' => 'ccl', 'Ciclev10003605m.g' => 'ccl', 'Ciclev10007828m.g' => 'ccl', 'Ciclev10014620m.g' => 'ccl', 'Ciclev10015169m.g' => 'ccl', 'Ciclev10018291m.g' => 'ccl', 'Ciclev10028256m.g' => 'ccl', 'Ciclev10033822m.g' => 'ccl', 'CiPaw.05G060300' => 'cil', 'CiPaw.05G085000' => 'cil', 'CiPaw.06G083700' => 'cil', 'CiPaw.06G120300' => 'cil', 'CiPaw.09G060500' => 'cil', 'CiPaw.09G123800' => 'cil', 'CiPaw.11G169700' => 'cil', 'CiPaw.12G118300' => 'cil', 'CiPaw.15G071000' => 'cil', 'CiPaw.15G081900' => 'cil', 'ClCG01G024610' => 'cla', 'ClCG03G006070' => 'cla', 'ClCG05G019250' => 'cla', 'ClCG09G009500' => 'cla', 'ClCG11G008200' => 'cla', 'ClCG11G018080' => 'cla', 'COL.COLO4_17373' => 'col', 'COL.COLO4_22994' => 'col', 'COL.COLO4_26389' => 'col', 'COL.COLO4_27170' => 'col', 'COL.COLO4_31074' => 'col', 'COL.COLO4_31465' => 'col', 'COL.COLO4_36438' => 'col', 'COL.COLO4_36439' => 'col', 'Cpa.g.c38781' => 'cpa', 'Cpa.g.sc128.12' => 'cpa', 'Cpa.g.sc166.7' => 'cpa', 'Cpa.g.sc166.8' => 'cpa', 'Cpa.g.sc20.111' => 'cpa', 'Cpa.g.sc27.31' => 'cpa', 'Cpa.g.sc64.36' => 'cpa', 'Cpa.g.sc64.37' => 'cpa', 'Cpa.g.sc66.49' => 'cpa', 'Cpa.g.sc80.64' => 'cpa', 'CsaV3_1G012320' => 'csa', 'CsaV3_2G008480' => 'csa', 'CsaV3_2G033450' => 'csa', 'CsaV3_3G044830' => 'csa', 'CsaV3_4G033710' => 'csa', 'CsaV3_6G051730' => 'csa', 'CsaV3_7G025350' => 'csa', 'CSS0001067' => 'camsi', 'CSS0005996' => 'camsi', 'CSS0006590' => 'camsi', 'CSS0009673' => 'camsi', 'CSS0010201' => 'camsi', 'CSS0010549' => 'camsi', 'CSS0011364' => 'camsi', 'CSS0014473' => 'camsi', 'CSS0014961' => 'camsi', 'CSS0020191' => 'camsi', 'CSS0021165' => 'camsi', 'CSS0022306' => 'camsi', 'CSS0030591' => 'camsi', 'CSS0030696' => 'camsi', 'CSS0032653' => 'camsi', 'CSS0037487' => 'camsi', 'CSS0041102' => 'camsi', 'CSS0041261' => 'camsi', 'CSS0046246' => 'camsi', 'CSS0049256' => 'camsi', 'DCAR_004075' => 'dca', 'DCAR_011538' => 'dca', 'DCAR_019553' => 'dca', 'DCAR_020952' => 'dca', 'DCAR_021739' => 'dca', 'DCAR_027407' => 'dca', 'DCAR_027913' => 'dca', 'DCAR_028066' => 'dca', 'Dinv05899' => 'din', 'Dinv07563' => 'din', 'Dinv08010' => 'din', 'Dinv14125' => 'din', 'Dinv20172' => 'din', 'Dinv30743' => 'din', 'Dinv31229' => 'din', 'Dinv34162' => 'din', 'Dinv36028' => 'din', 'Dinv39368' => 'din', 'Dinv40565' => 'din', 'Dinv41706' => 'din', 'Duzib052G0089' => 'dzi', 'Duzib116G0641' => 'dzi', 'Duzib132G0069' => 'dzi', 'Duzib132G1219' => 'dzi', 'Duzib147G0278' => 'dzi', 'Duzib160G0480' => 'dzi', 'Duzib170G0661' => 'dzi', 'Duzib177G0591' => 'dzi', 'Duzib187G1353' => 'dzi', 'Duzib192G0858' => 'dzi', 'Duzib192G0883' => 'dzi', 'Duzib213G0506' => 'dzi', 'Duzib235G0289' => 'dzi', 'Duzib251G0422' => 'dzi', 'ECA232G3898' => 'eca', 'ECA233G5950' => 'eca', 'ECA234G1699' => 'eca', 'ECA234G2421' => 'eca', 'ECA236G0426' => 'eca', 'ECA236G4331' => 'eca', 'ECA248G2573' => 'eca', 'EL10Ac1g00077' => 'bvu', 'EL10Ac1g01746' => 'bvu', 'EL10Ac2g03464' => 'bvu', 'EL10Ac4g08176' => 'bvu', 'EL10Ac7g17521' => 'bvu', 'EL10Ac8g20386' => 'bvu', 'EL10Ac9g21343' => 'bvu', 'EL10Ac9g22688' => 'bvu', 'Eucgr.B03434' => 'egr', 'Eucgr.D00618' => 'egr', 'Eucgr.E02395' => 'egr', 'Eucgr.F01129' => 'egr', 'Eucgr.F02622' => 'egr', 'Eucgr.F04207' => 'egr', 'FAN01G0570' => 'fan', 'FAN03G3351' => 'fan', 'FAN06G3702' => 'fan', 'FAN07G2149' => 'fan', 'FAN10G3758' => 'fan', 'FAN11G1170' => 'fan', 'FAN11G2050' => 'fan', 'FAN11G2724' => 'fan', 'FAN12G1700' => 'fan', 'FAN12G2028' => 'fan', 'FAN15G1160' => 'fan', 'FAN15G3063' => 'fan', 'FAN16G2540' => 'fan', 'FAN16G3077' => 'fan', 'FAN16G3624' => 'fan', 'FAN17G0221' => 'fan', 'FAN20G2492' => 'fan', 'FAN20G2905' => 'fan', 'FAN21G0548' => 'fan', 'FAN21G1300' => 'fan', 'FAN22G0077' => 'fan', 'FAN22G1315' => 'fan', 'FAN24G1280' => 'fan', 'FAN24G1445' => 'fan', 'FAN24G3527' => 'fan', 'FAN25G0464' => 'fan', 'FAN25G2885' => 'fan', 'FAN25G3270' => 'fan', 'FAN27G1101' => 'fan', 'FAN27G2846' => 'fan', 'FAN27G3524' => 'fan', 'FvH4_2g11770' => 'fve', 'FvH4_2g15630' => 'fve', 'FvH4_3g05570' => 'fve', 'FvH4_3g09110' => 'fve', 'FvH4_3g19940' => 'fve', 'FvH4_4g04821' => 'fve', 'FvH4_4g31480' => 'fve', 'FvH4_7g01740' => 'fve', 'Glyma.05G130400' => 'gma', 'Glyma.05G156400' => 'gma', 'Glyma.07G197000' => 'gma', 'Glyma.08G085151' => 'gma', 'Glyma.08G114500' => 'gma', 'Glyma.08G300400' => 'gma', 'Glyma.10G215800' => 'gma', 'Glyma.12G224400' => 'gma', 'Glyma.13G179300' => 'gma', 'Glyma.13G218151' => 'gma', 'Glyma.13G238800' => 'gma', 'Glyma.13G276900' => 'gma', 'Glyma.14G078200' => 'gma', 'Glyma.15G074500' => 'gma', 'Glyma.15G094100' => 'gma', 'Glyma.17G247200' => 'gma', 'Glyma.18G120100' => 'gma', 'Glyma.20G176000' => 'gma', 'Gohir.A01G063600' => 'ghi', 'Gohir.A01G170301' => 'ghi', 'Gohir.A02G060500' => 'ghi', 'Gohir.A05G133850' => 'ghi', 'Gohir.A05G161400' => 'ghi', 'Gohir.A06G012900' => 'ghi', 'Gohir.A06G035901' => 'ghi', 'Gohir.A06G127100' => 'ghi', 'Gohir.A06G210500' => 'ghi', 'Gohir.A08G008650' => 'ghi', 'Gohir.A09G072700' => 'ghi', 'Gohir.A09G088301' => 'ghi', 'Gohir.A10G040600' => 'ghi', 'Gohir.A12G036300' => 'ghi', 'Gohir.A12G143350' => 'ghi', 'Gohir.A12G165500' => 'ghi', 'Gohir.A13G145700' => 'ghi', 'Gohir.D01G050000' => 'ghi', 'Gohir.D01G051366' => 'ghi', 'Gohir.D01G161350' => 'ghi', 'Gohir.D02G065900' => 'ghi', 'Gohir.D05G164200' => 'ghi', 'Gohir.D05G355500' => 'ghi', 'Gohir.D06G010400' => 'ghi', 'Gohir.D06G111250' => 'ghi', 'Gohir.D06G132000' => 'ghi', 'Gohir.D06G210500' => 'ghi', 'Gohir.D07G165675' => 'ghi', 'Gohir.D08G062240' => 'ghi', 'Gohir.D08G086101' => 'ghi', 'Gohir.D08G138060' => 'ghi', 'Gohir.D09G072300' => 'ghi', 'Gohir.D10G041400' => 'ghi', 'Gohir.D11G191020' => 'ghi', 'Gohir.D11G212066' => 'ghi', 'Gohir.D12G036300' => 'ghi', 'Gohir.D12G168600' => 'ghi', 'Gohir.D13G150600' => 'ghi', 'Gorai.001G057300' => 'gra', 'Gorai.002G069900' => 'gra', 'Gorai.002G200000' => 'gra', 'Gorai.003G067600' => 'gra', 'Gorai.005G074800' => 'gra', 'Gorai.006G087300' => 'gra', 'Gorai.008G037500' => 'gra', 'Gorai.008G181400' => 'gra', 'Gorai.009G169400' => 'gra', 'Gorai.009G387900' => 'gra', 'Gorai.010G013300' => 'gra', 'Gorai.010G153800' => 'gra', 'Gorai.010G255800' => 'gra', 'Gorai.011G043700' => 'gra', 'Gorai.011G198900' => 'gra', 'Gorai.013G168400' => 'gra', 'GSVIVG01005212001' => 'vvi', 'GSVIVG01006163001' => 'vvi', 'GSVIVG01009625001' => 'vvi', 'GSVIVG01014338001' => 'vvi', 'GSVIVG01020005001' => 'vvi', 'GSVIVG01021450001' => 'vvi', 'GSVIVG01023975001' => 'vvi', 'GSVIVG01034490001' => 'vvi', 'HanXRQChr04g0112071' => 'han', 'HanXRQChr05g0131151' => 'han', 'HanXRQChr09g0262371' => 'han', 'HanXRQChr09g0268401' => 'han', 'HanXRQChr10g0279241' => 'han', 'HanXRQChr10g0297961' => 'han', 'HanXRQChr11g0326231' => 'han', 'HanXRQChr11g0328471' => 'han', 'HanXRQChr16g0507941' => 'han', 'HanXRQChr17g0560211' => 'han', 'Haze_02108' => 'cav', 'Haze_02428' => 'cav', 'Haze_05593' => 'cav', 'Haze_06448' => 'cav', 'Haze_09427' => 'cav', 'Haze_12022' => 'cav', 'Haze_17612' => 'cav', 'Haze_17928' => 'cav', 'Hma1.2p1_0032F.1_g019250' => 'hma', 'Hma1.2p1_0163F.1_g072690' => 'hma', 'Hma1.2p1_0265F.1_g106710' => 'hma', 'Hma1.2p1_0286F.1_g113970' => 'hma', 'Hma1.2p1_0363F.1_g136640' => 'hma', 'Hma1.2p1_0584F.1_g183470' => 'hma', 'Hma1.2p1_0885F.1_g232570' => 'hma', 'HPP92_006022' => 'vpl', 'HPP92_007320' => 'vpl', 'HPP92_011521' => 'vpl', 'HPP92_019387' => 'vpl', 'HPP92_024038' => 'vpl', 'Hund05891' => 'sun', 'Hund06450' => 'sun', 'Hund12053' => 'sun', 'Hund16800' => 'sun', 'Hund21222' => 'sun', 'Hund22896' => 'sun', 'Hund23746' => 'sun', 'Hund27083' => 'sun', 'Lalb_Chr02g0141831' => 'lal', 'Lalb_Chr02g0141841' => 'lal', 'Lalb_Chr05g0220411' => 'lal', 'Lalb_Chr06g0162081' => 'lal', 'Lalb_Chr09g0327651' => 'lal', 'Lalb_Chr13g0295051' => 'lal', 'Lalb_Chr15g0086801' => 'lal', 'Lalb_Chr16g0383781' => 'lal', 'Lalb_Chr16g0383791' => 'lal', 'Lalb_Chr18g0055441' => 'lal', 'Lalb_Chr18g0059611' => 'lal', 'Lalb_Chr20g0109661' => 'lal', 'Lalb_Chr20g0109831' => 'lal', 'Lalb_Chr20g0121871' => 'lal', 'Lalb_Chr22g0355361' => 'lal', 'Lalb_Chr25g0286371' => 'lal', 'Lj1A1187G43' => 'lonja', 'Lj1A1205T50' => 'lonja', 'Lj1A800G33' => 'lonja', 'Lj1C1187T7' => 'lonja', 'Lj1C843T11' => 'lonja', 'Lj1g0010940' => 'lja', 'Lj2A288T69' => 'lonja', 'Lj3g0024276' => 'lja', 'Lj4A47T76' => 'lonja', 'Lj4g0005805' => 'lja', 'Lj4g0006097' => 'lja', 'Lj4g0008528' => 'lja', 'Lj4g0024907' => 'lja', 'Lj5g0012472' => 'lja', 'Lj5g0018648' => 'lja', 'Lj6C789G1' => 'lonja', 'Lj6g0004000' => 'lja', 'Lj7A292G67' => 'lonja', 'Lj7A292T64' => 'lonja', 'Lj9A400T58' => 'lonja', 'Lsat_1_v5_gn_1_126181' => 'lsa', 'Lsat_1_v5_gn_4_123041' => 'lsa', 'Lsat_1_v5_gn_4_133620' => 'lsa', 'Lsat_1_v5_gn_4_53221' => 'lsa', 'Lsat_1_v5_gn_4_71961' => 'lsa', 'Lsat_1_v5_gn_7_105241' => 'lsa', 'Lsat_1_v5_gn_7_21361' => 'lsa', 'Lsat_1_v5_gn_7_28860' => 'lsa', 'Lsat_1_v5_gn_7_31260' => 'lsa', 'Lsat_1_v5_gn_8_52801' => 'lsa', 'Manes.02G191400' => 'mes', 'Manes.03G110100' => 'mes', 'Manes.04G071100' => 'mes', 'Manes.05G100500' => 'mes', 'Manes.05G164700' => 'mes', 'Manes.15G087000' => 'mes', 'Manes.15G121500' => 'mes', 'Manes.16G028300' => 'mes', 'Manes.17G046100' => 'mes', 'Manes.17G069800' => 'mes', 'Manes.18G100500' => 'mes', 'Mapoly0002s0109' => 'mpo', 'Mapoly0024s0007' => 'mpo', 'Mapoly0089s0032' => 'mpo', 'MBI04_g42241_MAGBIO' => 'mbi', 'MBI05_g11988_MAGBIO' => 'mbi', 'MBI05_g35452_MAGBIO' => 'mbi', 'MBI07_g30179_MAGBIO' => 'mbi', 'MBI07_g35859_MAGBIO' => 'mbi', 'MBI07_g35860_MAGBIO' => 'mbi', 'MBI07_g37166_MAGBIO' => 'mbi', 'MBI08_g18172_MAGBIO' => 'mbi', 'MBI09_g08441_MAGBIO' => 'mbi', 'MBI13_g01676_MAGBIO' => 'mbi', 'MBI14_g42955_MAGBIO' => 'mbi', 'MBI16_g13161_MAGBIO' => 'mbi', 'MBI17_g27204_MAGBIO' => 'mbi', 'MBI19_g21595_MAGBIO' => 'mbi', 'MD00G1148400' => 'mdo', 'MD02G1301200' => 'mdo', 'MD03G1227800' => 'mdo', 'MD05G1041100' => 'mdo', 'MD05G1124800' => 'mdo', 'MD05G1284000' => 'mdo', 'MD05G1338800' => 'mdo', 'MD05G1338900' => 'mdo', 'MD07G1022800' => 'mdo', 'MD10G1047500' => 'mdo', 'MD10G1127500' => 'mdo', 'MD10G1262300' => 'mdo', 'MD10G1293800' => 'mdo', 'MD16G1074300' => 'mdo', 'Medtr1g021670' => 'mtr', 'Medtr1g096320' => 'mtr', 'Medtr2g013690' => 'mtr', 'Medtr2g019450' => 'mtr', 'Medtr2g085170' => 'mtr', 'Medtr4g088785' => 'mtr', 'Medtr8g055930' => 'mtr', 'Medtr8g085850' => 'mtr', 'MELO3C002605.2' => 'cme', 'MELO3C003891.2' => 'cme', 'MELO3C004012.2' => 'cme', 'MELO3C007134.2' => 'cme', 'MELO3C008118.2' => 'cme', 'MELO3C016700.2' => 'cme', 'MELO3C024127.2' => 'cme', 'MELO3C033361.2' => 'cme', 'MELO3C033362.2' => 'cme', 'Migut.C00430' => 'egut', 'Migut.C01246' => 'egut', 'Migut.E00101' => 'egut', 'Migut.H01486' => 'egut', 'Migut.H01939' => 'egut', 'Migut.K00360' => 'egut', 'Migut.M00910' => 'egut', 'Migut.M01139' => 'egut', 'Migut.N02677' => 'egut', 'MSTRG.13252' => 'ama', 'MSTRG.14701' => 'ama', 'MSTRG.1521' => 'ama', 'MSTRG.15884' => 'ama', 'MSTRG.16242' => 'ama', 'MSTRG.22285' => 'ama', 'MSTRG.22444' => 'ama', 'MSTRG.2349' => 'ama', 'MSTRG.26308' => 'ama', 'MSTRG.28296' => 'ama', 'MSTRG.9895' => 'ama', 'Nitab4.5_0000110g0060' => 'nta', 'Nitab4.5_0000420g0130' => 'nta', 'Nitab4.5_0000422g0030' => 'nta', 'Nitab4.5_0000560g0180' => 'nta', 'Nitab4.5_0000703g0100' => 'nta', 'Nitab4.5_0000786g0200' => 'nta', 'Nitab4.5_0001336g0020' => 'nta', 'Nitab4.5_0001796g0030' => 'nta', 'Nitab4.5_0003348g0060' => 'nta', 'Nitab4.5_0003698g0040' => 'nta', 'Nitab4.5_0003942g0090' => 'nta', 'Nitab4.5_0004775g0070' => 'nta', 'Nitab4.5_0004864g0030' => 'nta', 'Nitab4.5_0005615g0020' => 'nta', 'Nitab4.5_0009288g0030' => 'nta', 'Nitab4.5_0009341g0010' => 'nta', 'Nitab4.5_0009535g0010' => 'nta', 'Nn1g03995' => 'nnu', 'Nn1g04100' => 'nnu', 'Nn1g06530' => 'nnu', 'Nn3g16404' => 'nnu', 'Nn3g17212' => 'nnu', 'Nn3g20776' => 'nnu', 'Nn3g21923' => 'nnu', 'Nn5g27737' => 'nnu', 'Nn5g29461' => 'nnu', 'Nn7g38355' => 'nnu', 'Nn8g39873' => 'nnu', 'Oeu000548.2' => 'oeu', 'Oeu004672.1' => 'oeu', 'Oeu015605.2' => 'oeu', 'Oeu016092.1' => 'oeu', 'Oeu017879.3' => 'oeu', 'Oeu024910.1' => 'oeu', 'Oeu028965.1' => 'oeu', 'Oeu031269.1' => 'oeu', 'Oeu031270.1' => 'oeu', 'Oeu032535.1' => 'oeu', 'Oeu034151.1' => 'oeu', 'Oeu034152.1' => 'oeu', 'Oeu034588.2' => 'oeu', 'Oeu050846.1' => 'oeu', 'Oeu050849.2' => 'oeu', 'Oeu051063.2' => 'oeu', 'Oeu052368.1' => 'oeu', 'Oeu052370.1' => 'oeu', 'Os01g0210400' => 'osa', 'Os01g0304300' => 'osa', 'Os01g0749100' => 'osa', 'Os02g0745800' => 'osa', 'Os03g0769050' => 'osa', 'Os05g0531500' => 'osa', 'Os06g0724300' => 'osa', 'Os11g0198100' => 'osa', 'Peaxi162Scf00069g01425' => 'pax', 'Peaxi162Scf00280g00811' => 'pax', 'Peaxi162Scf00310g00615' => 'pax', 'Peaxi162Scf00362g00542' => 'pax', 'Peaxi162Scf00461g00310' => 'pax', 'Peaxi162Scf00530g00118' => 'pax', 'Peaxi162Scf00541g00057' => 'pax', 'Peaxi162Scf00661g00017' => 'pax', 'Peaxi162Scf00926g00027' => 'pax', 'Peaxi162Scf01064g00263' => 'pax', 'Peaxi162Scf01211g00135' => 'pax', 'PGR004G2336' => 'pgr', 'PGR042G0327' => 'pgr', 'PGR042G1957' => 'pgr', 'PGR042G2003' => 'pgr', 'PGR042G3929' => 'pgr', 'PGR083G1137' => 'pgr', 'PGR083G1364' => 'pgr', 'PGSC0003DMG400003381' => 'stu', 'PGSC0003DMG400003417' => 'stu', 'PGSC0003DMG400008981' => 'stu', 'PGSC0003DMG400012417' => 'stu', 'PGSC0003DMG400012823' => 'stu', 'PGSC0003DMG400016885' => 'stu', 'PGSC0003DMG400022812' => 'stu', 'PGSC0003DMG400029726' => 'stu', 'PGSC0003DMG401009243' => 'stu', 'PGSC0003DMG401031505' => 'stu', 'PGSC0003DMG402031505' => 'stu', 'Phvul.001G017600' => 'pvu', 'Phvul.002G193500' => 'pvu', 'Phvul.002G228900' => 'pvu', 'Phvul.002G236800' => 'pvu', 'Phvul.003G049500' => 'pvu', 'Phvul.005G072000' => 'pvu', 'Phvul.006G164800' => 'pvu', 'Phvul.006G185100' => 'pvu', 'Phvul.007G090000' => 'pvu', 'Potri.001G399800' => 'ptr', 'Potri.002G149900' => 'ptr', 'Potri.004G044100' => 'ptr', 'Potri.004G177600' => 'ptr', 'Potri.009G138000' => 'ptr', 'Potri.010G094000' => 'ptr', 'Potri.011G053000' => 'ptr', 'Potri.011G119300' => 'ptr', 'Potri.013G113700' => 'ptr', 'Potri.018G107800' => 'ptr', 'Potri.019G084100' => 'ptr', 'Pp3c14_23720' => 'ppa', 'Pp3c16_6340' => 'ppa', 'Pp3c23_13420' => 'ppa', 'Pp3c24_2740' => 'ppa', 'Pp3c25_860' => 'ppa', 'Pp3c8_21750' => 'ppa', 'Prupe.1G273000' => 'ppe', 'Prupe.1G273700' => 'ppe', 'Prupe.1G274100' => 'ppe', 'Prupe.2G023300' => 'ppe', 'Prupe.4G048000' => 'ppe', 'Prupe.4G080400' => 'ppe', 'Prupe.4G181200' => 'ppe', 'Prupe.8G056900' => 'ppe', 'Prupe.8G168700' => 'ppe', 'Psat1g189080' => 'psa', 'Psat1g204760' => 'psa', 'Psat4g175560' => 'psa', 'Psat4g177720' => 'psa', 'Psat5g244240' => 'psa', 'Psat6g010720' => 'psa', 'Psat6g187200' => 'psa', 'Psat7g072040' => 'psa', 'PSO017G3501' => 'pso', 'PSO063G2148' => 'pso', 'PSO063G5608' => 'pso', 'PSO210G6392' => 'pso', 'PSO541G2319' => 'pso', 'PSO541G2836' => 'pso', 'PSO541G4012' => 'pso', 'PSO541G6253' => 'pso', 'PSO675G0580' => 'pso', 'PSO675G0856' => 'pso', 'PSO675G5635' => 'pso', 'PSO675G9157' => 'pso', 'PSO832G1660' => 'pso', 'PSO832G1969' => 'pso', 'QL02p007186' => 'qlo', 'QL02p033904' => 'qlo', 'QL03p064391' => 'qlo', 'QL05p040593' => 'qlo', 'QL05p058242' => 'qlo', 'QL08p021825' => 'qlo', 'QL11p004981' => 'qlo', 'RcHm_v2.0_Chr1g0318301' => 'rch', 'RcHm_v2.0_Chr4g0418501' => 'rch', 'RcHm_v2.0_Chr4g0439971' => 'rch', 'RcHm_v2.0_Chr5g0008541' => 'rch', 'RcHm_v2.0_Chr5g0014101' => 'rch', 'RcHm_v2.0_Chr5g0014131' => 'rch', 'RcHm_v2.0_Chr5g0033621' => 'rch', 'RcHm_v2.0_Chr6g0272041' => 'rch', 'RcHm_v2.0_Chr6g0278831' => 'rch', 'Rhsim02G0130400' => 'rsi', 'Rhsim02G0171100' => 'rsi', 'Rhsim05G0053000' => 'rsi', 'Rhsim05G0053100' => 'rsi', 'Rhsim06G0096500' => 'rsi', 'Rhsim06G0096600' => 'rsi', 'Rhsim06G0199100' => 'rsi', 'Rhsim12G0062300' => 'rsi', 'Rhsim12G0062800' => 'rsi', 'Sabra02G0118600' => 'sbr', 'Sabra04G0027300' => 'sbr', 'Sabra04G0119500' => 'sbr', 'Sabra08G0112500' => 'sbr', 'Sabra11G0036800' => 'sbr', 'Sabra11G0103800' => 'sbr', 'Sabra13G0096300' => 'sbr', 'Sabra16G0262300' => 'sbr', 'Sabra18G0091700' => 'sbr', 'Sabra19G0095400' => 'sbr', 'SalBow6G3080' => 'sbo', 'SalBow7G1157' => 'sbo', 'SalBow7G2123' => 'sbo', 'SalBow7G2285' => 'sbo', 'SalBow7G3537' => 'sbo', 'SalBow8G2947' => 'sbo', 'SalBow8G4463' => 'sbo', 'SalBow8G5466' => 'sbo', 'Sc01g0001750' => 'sci', 'Sc02g0006640' => 'sci', 'Sc02g0006670' => 'sci', 'Sc04g0008220' => 'sci', 'Sc05g0006190' => 'sci', 'Sc08g0002760' => 'sci', 'Sc17g0006170' => 'sci', 'Sc22g0002050' => 'sci', 'Sc23g0001190' => 'sci', 'Sc24g0000980' => 'sci', 'Sed0006245' => 'sed', 'Sed0007543' => 'sed', 'Sed0009411' => 'sed', 'Sed0010765' => 'sed', 'Sed0012944' => 'sed', 'Sed0014682' => 'sed', 'Sed0016174' => 'sed', 'Sed0016796' => 'sed', 'Sed0020317' => 'sed', 'Sed0021467' => 'sed', 'SEGI_01316' => 'sgi', 'SEGI_03374' => 'sgi', 'SEGI_16265' => 'sgi', 'SEGI_18569' => 'sgi', 'SEGI_20351' => 'sgi', 'SEGI_26395' => 'sgi', 'SEGI_29469' => 'sgi', 'SEGI_34771' => 'sgi', 'SEGI_36769' => 'sgi', 'SEGI_37139' => 'sgi', 'SGA_v2.0_scaffold100G29687' => 'sas', 'SGA_v2.0_scaffold118G32472' => 'sas', 'SGA_v2.0_scaffold14G07051' => 'sas', 'SGA_v2.0_scaffold183G39845' => 'sas', 'SGA_v2.0_scaffold1G00174' => 'sas', 'SGA_v2.0_scaffold22G09714' => 'sas', 'SGA_v2.0_scaffold333G48992' => 'sas', 'SGA_v2.0_scaffold46G17491' => 'sas', 'SGA_v2.0_scaffold49G18294' => 'sas', 'SGA_v2.0_scaffold63G21658' => 'sas', 'SHI01741' => 'shi', 'SHI05771' => 'shi', 'SHI18077' => 'shi', 'SHI20525' => 'shi', 'SHI20527' => 'shi', 'SHI20528' => 'shi', 'SMO172G0185' => 'smo', 'SMO198G0020' => 'smo', 'SMO351G0006' => 'smo', 'SMO356G0118' => 'smo', 'SMO358G0296' => 'smo', 'SMO367G0079' => 'smo', 'SMO367G1277' => 'smo', 'Solyc01g014220.3' => 'sly', 'Solyc01g111770.2' => 'sly', 'Solyc02g078180.3' => 'sly', 'Solyc03g006430.3' => 'sly', 'Solyc03g006456.1' => 'sly', 'Solyc03g079860.2' => 'sly', 'Solyc04g079770.3' => 'sly', 'Solyc05g007430.4' => 'sly', 'Solyc07g063150.3' => 'sly', 'Solyc08g016620.3' => 'sly', 'Solyc09g057590.3' => 'sly', 'Solyc09g057600.1' => 'sly', 'Solyc10g009050.3' => 'sly', 'Solyc11g017420.2' => 'sly', 'Sopen01g053810' => 'spe', 'Sopen02g023040' => 'spe', 'Sopen03g002440' => 'spe', 'Sopen04g033350' => 'spe', 'Sopen05g003310' => 'spe', 'Sopen07g004050' => 'spe', 'Sopen07g031340' => 'spe', 'Sopen08g006990' => 'spe', 'Sopen10g004830' => 'spe', 'Sopen11g009370' => 'spe', 'Sp1g24450' => 'spa', 'Sp1g29670' => 'spa', 'Sp1g39600' => 'spa', 'Sp2g11080' => 'spa', 'Sp2g13970' => 'spa', 'Sp4g16130' => 'spa', 'Sp6g13080' => 'spa', 'Sp7g37270' => 'spa', 'TAR371G0065' => 'tar', 'TAR376G0340' => 'tar', 'TAR376G0435' => 'tar', 'TAR381G0002' => 'tar', 'TAR381G1236' => 'tar', 'TAR624G0055' => 'tar', 'TAR624G0324' => 'tar', 'TAR624G0696' => 'tar', 'TAR624G0906' => 'tar', 'TAR625G0107' => 'tar', 'TAR626G0015' => 'tar', 'TAR626G1356' => 'tar', 'TAR627G0888' => 'tar', 'TAR628G0399' => 'tar', 'TAR628G1327' => 'tar', 'TAR629G2831' => 'tar', 'TAR629G2874' => 'tar', 'TAR633G1432' => 'tar', 'TAR633G2771' => 'tar', 'THA.LOC104803394' => 'tha', 'THA.LOC104805153' => 'tha', 'THA.LOC104806784' => 'tha', 'THA.LOC104810473' => 'tha', 'THA.LOC104813100' => 'tha', 'THA.LOC104814215' => 'tha', 'THA.LOC104815554' => 'tha', 'THA.LOC104820544' => 'tha', 'THA.LOC104824754' => 'tha', 'THA.LOC104827717' => 'tha', 'Thecc.02G031400' => 'tca', 'Thecc.02G055900' => 'tca', 'Thecc.02G350800' => 'tca', 'Thecc.06G150900' => 'tca', 'Thecc.06G186600' => 'tca', 'Thecc.07G089600' => 'tca', 'Thecc.08G020400' => 'tca', 'Thecc.08G182100' => 'tca', 'Thhalv10000873m.g' => 'esa', 'Thhalv10004185m.g' => 'esa', 'Thhalv10006981m.g' => 'esa', 'Thhalv10007204m.g' => 'esa', 'Thhalv10011374m.g' => 'esa', 'Thhalv10013482m.g' => 'esa', 'Thhalv10017801m.g' => 'esa', 'Thhalv10024983m.g' => 'esa', 'TPR.G12072' => 'tpr', 'TPR.G15769' => 'tpr', 'TPR.G16504' => 'tpr', 'TPR.G16506' => 'tpr', 'TPR.G24345' => 'tpr', 'TPR.G26666' => 'tpr', 'TPR.G27320' => 'tpr', 'TPR.G31819' => 'tpr', 'TPR.G38879' => 'tpr', 'TPR.G39015' => 'tpr', 'TPR.G8819' => 'tpr', 'TWI09G0924' => 'twi', 'TWI12G0811' => 'twi', 'TWI12G1294' => 'twi', 'TWI31G0150' => 'twi', 'TWI36G1262' => 'twi', 'TWI38G1287' => 'twi', 'TWI38G1633' => 'twi', 'TWI38G1982' => 'twi', 'TWI39G0116' => 'twi', 'TWI60G1011' => 'twi', 'TWI63G0171' => 'twi', 'TWI73G0839' => 'twi', 'TWI79G1511' => 'twi', 'unitig_0.g915' => 'ugi', 'unitig_0.g916' => 'ugi', 'unitig_21.g20219' => 'ugi', 'unitig_21.g20416' => 'ugi', 'unitig_578.g16132' => 'ugi', 'unitig_578.g16718' => 'ugi', 'unitig_62.g23481' => 'ugi', 'unitig_744.g24535' => 'ugi', 'unitig_749.g13525' => 'ugi', 'vmacro01248' => 'vma', 'vmacro02290' => 'vma', 'vmacro10946' => 'vma', 'vmacro11865' => 'vma', 'vmacro12493' => 'vma', 'vmacro17322' => 'vma', 'vmacro21599' => 'vma', 'vmacro23041' => 'vma', 'VMungo0251G0004' => 'vmu', 'VMungo0251G2639' => 'vmu', 'VMungo0251G2967' => 'vmu', 'VMungo0540G0864' => 'vmu', 'VMungo0540G1569' => 'vmu', 'VMungo0647G0317' => 'vmu', 'VMungo0720G1373' => 'vmu', 'VMungo0720G1508' => 'vmu', 'VMungo1080G0485' => 'vmu', 'VMungo1215G3177' => 'vmu', 'Zm00001eb112600' => 'zma', 'Zm00001eb120220' => 'zma', 'Zm00001eb153240' => 'zma', 'Zm00001eb168880' => 'zma', 'Zm00001eb213920' => 'zma', 'Zm00001eb228280' => 'zma', 'Zm00001eb254580' => 'zma', 'Zm00001eb272180' => 'zma', 'Zm00001eb293190' => 'zma', 'Zm00001eb322930' => 'zma', 'Zm00001eb353360' => 'zma', 'Zm00001eb353390' => 'zma', 'Zm00001eb353430' => 'zma', 'Zm00001eb353440' => 'zma', 'Zm00001eb353780' => 'zma' ), 'gf_id' => 'HOM05D000499', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000499' ), 'data_identifier' => 'HOM05D000499', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000499', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1066', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p29780' => 'bna', 'A02p33180' => 'bna', 'A03p16470' => 'bna', 'A03p66010' => 'bna', 'A04p25970' => 'bna', 'A06p01270' => 'bna', 'A06p46080' => 'bna', 'A07p11400' => 'bna', 'A08p01840' => 'bna', 'A08p08230' => 'bna', 'A08p25740' => 'bna', 'A09p32070' => 'bna', 'A09p37830' => 'bna', 'A09p42840' => 'bna', 'A09p42850' => 'bna', 'Aa31LG10G2060' => 'aar', 'Aa31LG2G7410' => 'aar', 'Aa31LG6G10200' => 'aar', 'Aa31LG6G16680' => 'aar', 'Aa31LG6G8470' => 'aar', 'Aa31LG9G12730' => 'aar', 'Aa31LG9G13680' => 'aar', 'Aa31LG9G14920' => 'aar', 'Aa31LG9G6650' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4977' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5467' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3254' => 'aag', 'Actinidia02578' => 'ach', 'Actinidia07693' => 'ach', 'Actinidia08413' => 'ach', 'Actinidia08414' => 'ach', 'Actinidia15289' => 'ach', 'Actinidia19871' => 'ach', 'Actinidia21475' => 'ach', 'Actinidia22576' => 'ach', 'Actinidia28327' => 'ach', 'Actinidia32491' => 'ach', 'Actinidia39463' => 'ach', 'Actinidia39571' => 'ach', 'Ah.01g013750' => 'amhyb', 'Ah.01g023210' => 'amhyb', 'Ah.04g164850' => 'amhyb', 'Ah.05g178060' => 'amhyb', 'Ah.07g204270' => 'amhyb', 'Ah.07g208480' => 'amhyb', 'Ah.09g237410' => 'amhyb', 'Ah.14g089460' => 'amhyb', 'AL1G41790' => 'aly', 'AL1G49050' => 'aly', 'AL1G53810' => 'aly', 'AL1G61400' => 'aly', 'AL4G18580' => 'aly', 'AL5G12510' => 'aly', 'AL5G12540' => 'aly', 'AL6G43230' => 'aly', 'AL7G10370' => 'aly', 'AL7G19250' => 'aly', 'AL8G12240' => 'aly', 'AL8G18540' => 'aly', 'Aqoxy1G02409' => 'aox', 'Aqoxy2G03993' => 'aox', 'Aqoxy3G03357' => 'aox', 'Aqoxy4G00785' => 'aox', 'Aqoxy5G02598' => 'aox', 'Aqoxy6G00132' => 'aox', 'Aqoxy7G01776' => 'aox', 'Aqoxy7G02316' => 'aox', 'Aqoxy7G03973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.12AFKW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B8730' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27IQR1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3F75VG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3RE0GA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41TCQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.527VTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FIR39' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5W8UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DA38EV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ63HS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H1I32C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HC27T5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4M8AP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7N3CZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9UVDZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LS1NQA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT1D4B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SKC4TM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCFV76' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF9Q1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQWD9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1ZM88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WE07RT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YCK7VH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJE6Q6' => 'arhy', 'AT1G28240' => 'ath', 'AT1G34550' => 'ath', 'AT1G53040' => 'ath', 'AT2G02910' => 'ath', 'AT4G09630' => 'ath', 'AT4G38500' => 'ath', 'AT5G42660' => 'ath', 'AT5G46220' => 'ath', 'ATR0152G026' => 'atr', 'ATR0564G343' => 'atr', 'ATR0706G151' => 'atr', 'ATR0733G207' => 'atr', 'ATR0751G234' => 'atr', 'ATR0807G048' => 'atr', 'ATR1091G084' => 'atr', 'Atru.chr10.1229' => 'acertr', 'Atru.chr10.1230' => 'acertr', 'Atru.chr10.1874' => 'acertr', 'Atru.chr11.1808' => 'acertr', 'Atru.chr13.1795' => 'acertr', 'Atru.chr13.570' => 'acertr', 'Atru.chr2.2608' => 'acertr', 'Atru.chr2.2609' => 'acertr', 'Atru.chr5.3428' => 'acertr', 'Atru.chr8.1171' => 'acertr', 'AUR62004651' => 'cqu', 'AUR62008675' => 'cqu', 'AUR62010014' => 'cqu', 'AUR62013004' => 'cqu', 'AUR62014825' => 'cqu', 'AUR62015015' => 'cqu', 'AUR62015151' => 'cqu', 'AUR62017020' => 'cqu', 'AUR62019422' => 'cqu', 'AUR62023570' => 'cqu', 'AUR62025571' => 'cqu', 'AUR62029098' => 'cqu', 'AUR62033863' => 'cqu', 'AUR62034296' => 'cqu', 'AUR62040075' => 'cqu', 'BcaB02g07334' => 'bca', 'BcaB02g10575' => 'bca', 'BcaB03g12119' => 'bca', 'BcaB03g12120' => 'bca', 'BcaB03g13945' => 'bca', 'BcaB04g17123' => 'bca', 'BcaB04g17867' => 'bca', 'BcaB04g19839' => 'bca', 'BcaB07g30317' => 'bca', 'BcaB07g32432' => 'bca', 'BcaB07g33362' => 'bca', 'BcaB08g36611' => 'bca', 'BcaC01g00028' => 'bca', 'BcaC01g01356' => 'bca', 'BcaC01g02034' => 'bca', 'BcaC01g06051' => 'bca', 'BcaC03g16839' => 'bca', 'BcaC03g17176' => 'bca', 'BcaC05g26829' => 'bca', 'BcaC06g31490' => 'bca', 'BcaC06g35344' => 'bca', 'BcaC06g36570' => 'bca', 'BcaC07g37537' => 'bca', 'BcaC08g43491' => 'bca', 'BcaC08g43773' => 'bca', 'BcaNung00234' => 'bca', 'BcaNung01982' => 'bca', 'BcaNung03707' => 'bca', 'BcaNung06454' => 'bca', 'BolC2t10762H' => 'bol', 'BolC2t11191H' => 'bol', 'BolC3t14322H' => 'bol', 'BolC3t19747H' => 'bol', 'BolC3t21425H' => 'bol', 'BolC4t27800H' => 'bol', 'BolC5t31423H' => 'bol', 'BolC6t35951H' => 'bol', 'BolC6t36282H' => 'bol', 'BolC7t40678H' => 'bol', 'BolC7t40679H' => 'bol', 'BolC7t42222H' => 'bol', 'BolC7t43492H' => 'bol', 'BolC7t46785H' => 'bol', 'BolC8t47853H' => 'bol', 'BolC9t56805H' => 'bol', 'BraA02t08000Z' => 'bra', 'BraA02t08341Z' => 'bra', 'BraA03t10936Z' => 'bra', 'BraA03t15657Z' => 'bra', 'BraA04t18100Z' => 'bra', 'BraA05t20523Z' => 'bra', 'BraA06t23353Z' => 'bra', 'BraA06t27473Z' => 'bra', 'BraA06t27769Z' => 'bra', 'BraA07t28928Z' => 'bra', 'BraA08t32236Z' => 'bra', 'BraA08t32841Z' => 'bra', 'BraA08t34524Z' => 'bra', 'BraA09t38742Z' => 'bra', 'BraA09t39295Z' => 'bra', 'C02p47180' => 'bna', 'C02p50990' => 'bna', 'C03p19360' => 'bna', 'C03p74950' => 'bna', 'C03p91000' => 'bna', 'C04p63260' => 'bna', 'C05p27050' => 'bna', 'C06p08750' => 'bna', 'C06p11490' => 'bna', 'C07p02820' => 'bna', 'C07p17180' => 'bna', 'C07p29440' => 'bna', 'C07p63730' => 'bna', 'C09p39260' => 'bna', 'CAN.G1164.34' => 'can', 'CAN.G1164.39' => 'can', 'CAN.G1530.3' => 'can', 'CAN.G162.61' => 'can', 'CAN.G176.6' => 'can', 'CAN.G289.49' => 'can', 'CAN.G370.21' => 'can', 'CAN.G370.22' => 'can', 'CAN.G371.117' => 'can', 'CAN.G58.37' => 'can', 'CAN.G588.98' => 'can', 'CANSAT21G2266' => 'cansat', 'CANSAT25G2799' => 'cansat', 'CANSAT35G0862' => 'cansat', 'CANSAT35G1704' => 'cansat', 'CANSAT35G1760' => 'cansat', 'CANSAT56G3971' => 'cansat', 'CANSAT56G4116' => 'cansat', 'CANSAT80G1259' => 'cansat', 'CARHR027730' => 'chi', 'CARHR033880' => 'chi', 'CARHR043270' => 'chi', 'CARHR145330' => 'chi', 'CARHR145340' => 'chi', 'CARHR175570' => 'chi', 'CARHR181570' => 'chi', 'CARHR258470' => 'chi', 'CARHR260490' => 'chi', 'CARHR294220' => 'chi', 'Carub.0001s2668' => 'cru', 'Carub.0001s3257' => 'cru', 'Carub.0001s4220' => 'cru', 'Carub.0005s0179' => 'cru', 'Carub.0006s2807' => 'cru', 'Carub.0007s0039' => 'cru', 'Carub.0008s0169' => 'cru', 'Carub.0008s0636' => 'cru', 'Ca_00338_v3' => 'car', 'Ca_00542_v3' => 'car', 'Ca_01844_v3' => 'car', 'Ca_10611_v3' => 'car', 'Ca_13326_v3' => 'car', 'Ca_17944_v3' => 'car', 'Ca_18546_v3' => 'car', 'Ca_24219_v3' => 'car', 'Ca_29972_v3' => 'car', 'CBR_g3681' => 'cbr', 'CBR_g40021' => 'cbr', 'Cc01_g08140' => 'ccan', 'Cc02_g13410' => 'ccan', 'Cc02_g37480' => 'ccan', 'Cc05_g12030' => 'ccan', 'Cc09_g03370' => 'ccan', 'Cc09_g10300' => 'ccan', 'Cc10_g03530' => 'ccan', 'Cc10_g11380' => 'ccan', 'CDE01G0176' => 'cde', 'CDE02G0675' => 'cde', 'CDE02G0942' => 'cde', 'CDE02G1153' => 'cde', 'CDE02G4177' => 'cde', 'CDE04G2117' => 'cde', 'CDE04G2736' => 'cde', 'CDE08G1161' => 'cde', 'CDE09G1238' => 'cde', 'Cfa000467' => 'cfa', 'Cfa000947' => 'cfa', 'Cfa004969' => 'cfa', 'Cfa005284' => 'cfa', 'Cfa008993' => 'cfa', 'Cfa018187' => 'cfa', 'Cfa018454' => 'cfa', 'Cfa020585' => 'cfa', 'Ciclev10000424m.g' => 'ccl', 'Ciclev10003605m.g' => 'ccl', 'Ciclev10007828m.g' => 'ccl', 'Ciclev10014620m.g' => 'ccl', 'Ciclev10015169m.g' => 'ccl', 'Ciclev10018291m.g' => 'ccl', 'Ciclev10028256m.g' => 'ccl', 'Ciclev10033822m.g' => 'ccl', 'CiPaw.05G060300' => 'cil', 'CiPaw.05G085000' => 'cil', 'CiPaw.06G083700' => 'cil', 'CiPaw.06G120300' => 'cil', 'CiPaw.09G060500' => 'cil', 'CiPaw.09G123800' => 'cil', 'CiPaw.11G169700' => 'cil', 'CiPaw.12G118300' => 'cil', 'CiPaw.15G071000' => 'cil', 'CiPaw.15G081900' => 'cil', 'ClCG01G024610' => 'cla', 'ClCG03G006070' => 'cla', 'ClCG05G019250' => 'cla', 'ClCG09G009500' => 'cla', 'ClCG11G008200' => 'cla', 'ClCG11G018080' => 'cla', 'COL.COLO4_17373' => 'col', 'COL.COLO4_22994' => 'col', 'COL.COLO4_26389' => 'col', 'COL.COLO4_27170' => 'col', 'COL.COLO4_31074' => 'col', 'COL.COLO4_31465' => 'col', 'COL.COLO4_36438' => 'col', 'COL.COLO4_36439' => 'col', 'Cpa.g.c38781' => 'cpa', 'Cpa.g.sc128.12' => 'cpa', 'Cpa.g.sc166.7' => 'cpa', 'Cpa.g.sc166.8' => 'cpa', 'Cpa.g.sc20.111' => 'cpa', 'Cpa.g.sc27.31' => 'cpa', 'Cpa.g.sc64.36' => 'cpa', 'Cpa.g.sc64.37' => 'cpa', 'Cpa.g.sc66.49' => 'cpa', 'Cpa.g.sc80.64' => 'cpa', 'CsaV3_1G012320' => 'csa', 'CsaV3_2G008480' => 'csa', 'CsaV3_2G033450' => 'csa', 'CsaV3_3G044830' => 'csa', 'CsaV3_4G033710' => 'csa', 'CsaV3_6G051730' => 'csa', 'CsaV3_7G025350' => 'csa', 'CSS0001067' => 'camsi', 'CSS0005996' => 'camsi', 'CSS0006590' => 'camsi', 'CSS0009673' => 'camsi', 'CSS0010201' => 'camsi', 'CSS0010549' => 'camsi', 'CSS0011364' => 'camsi', 'CSS0014473' => 'camsi', 'CSS0014961' => 'camsi', 'CSS0020191' => 'camsi', 'CSS0021165' => 'camsi', 'CSS0022306' => 'camsi', 'CSS0030591' => 'camsi', 'CSS0030696' => 'camsi', 'CSS0032653' => 'camsi', 'CSS0037487' => 'camsi', 'CSS0041102' => 'camsi', 'CSS0041261' => 'camsi', 'CSS0046246' => 'camsi', 'CSS0049256' => 'camsi', 'DCAR_004075' => 'dca', 'DCAR_011538' => 'dca', 'DCAR_019553' => 'dca', 'DCAR_020952' => 'dca', 'DCAR_021739' => 'dca', 'DCAR_027407' => 'dca', 'DCAR_027913' => 'dca', 'DCAR_028066' => 'dca', 'Dinv05899' => 'din', 'Dinv07563' => 'din', 'Dinv08010' => 'din', 'Dinv14125' => 'din', 'Dinv20172' => 'din', 'Dinv30743' => 'din', 'Dinv31229' => 'din', 'Dinv34162' => 'din', 'Dinv36028' => 'din', 'Dinv39368' => 'din', 'Dinv40565' => 'din', 'Dinv41706' => 'din', 'Duzib052G0089' => 'dzi', 'Duzib116G0641' => 'dzi', 'Duzib132G0069' => 'dzi', 'Duzib132G1219' => 'dzi', 'Duzib147G0278' => 'dzi', 'Duzib160G0480' => 'dzi', 'Duzib170G0661' => 'dzi', 'Duzib177G0591' => 'dzi', 'Duzib187G1353' => 'dzi', 'Duzib192G0858' => 'dzi', 'Duzib192G0883' => 'dzi', 'Duzib213G0506' => 'dzi', 'Duzib235G0289' => 'dzi', 'Duzib251G0422' => 'dzi', 'ECA232G3898' => 'eca', 'ECA233G5950' => 'eca', 'ECA234G1699' => 'eca', 'ECA234G2421' => 'eca', 'ECA236G0426' => 'eca', 'ECA236G4331' => 'eca', 'ECA248G2573' => 'eca', 'EL10Ac1g00077' => 'bvu', 'EL10Ac1g01746' => 'bvu', 'EL10Ac2g03464' => 'bvu', 'EL10Ac4g08176' => 'bvu', 'EL10Ac7g17521' => 'bvu', 'EL10Ac8g20386' => 'bvu', 'EL10Ac9g21343' => 'bvu', 'EL10Ac9g22688' => 'bvu', 'Eucgr.B03434' => 'egr', 'Eucgr.D00618' => 'egr', 'Eucgr.E02395' => 'egr', 'Eucgr.F01129' => 'egr', 'Eucgr.F02622' => 'egr', 'Eucgr.F04207' => 'egr', 'FAN01G0570' => 'fan', 'FAN03G3351' => 'fan', 'FAN06G3702' => 'fan', 'FAN07G2149' => 'fan', 'FAN10G3758' => 'fan', 'FAN11G1170' => 'fan', 'FAN11G2050' => 'fan', 'FAN11G2724' => 'fan', 'FAN12G1700' => 'fan', 'FAN12G2028' => 'fan', 'FAN15G1160' => 'fan', 'FAN15G3063' => 'fan', 'FAN16G2540' => 'fan', 'FAN16G3077' => 'fan', 'FAN16G3624' => 'fan', 'FAN17G0221' => 'fan', 'FAN20G2492' => 'fan', 'FAN20G2905' => 'fan', 'FAN21G0548' => 'fan', 'FAN21G1300' => 'fan', 'FAN22G0077' => 'fan', 'FAN22G1315' => 'fan', 'FAN24G1280' => 'fan', 'FAN24G1445' => 'fan', 'FAN24G3527' => 'fan', 'FAN25G0464' => 'fan', 'FAN25G2885' => 'fan', 'FAN25G3270' => 'fan', 'FAN27G1101' => 'fan', 'FAN27G2846' => 'fan', 'FAN27G3524' => 'fan', 'FvH4_2g11770' => 'fve', 'FvH4_2g15630' => 'fve', 'FvH4_3g05570' => 'fve', 'FvH4_3g09110' => 'fve', 'FvH4_3g19940' => 'fve', 'FvH4_4g04821' => 'fve', 'FvH4_4g31480' => 'fve', 'FvH4_7g01740' => 'fve', 'Glyma.05G130400' => 'gma', 'Glyma.05G156400' => 'gma', 'Glyma.07G197000' => 'gma', 'Glyma.08G085151' => 'gma', 'Glyma.08G114500' => 'gma', 'Glyma.08G300400' => 'gma', 'Glyma.10G215800' => 'gma', 'Glyma.12G224400' => 'gma', 'Glyma.13G179300' => 'gma', 'Glyma.13G218151' => 'gma', 'Glyma.13G238800' => 'gma', 'Glyma.13G276900' => 'gma', 'Glyma.14G078200' => 'gma', 'Glyma.15G074500' => 'gma', 'Glyma.15G094100' => 'gma', 'Glyma.17G247200' => 'gma', 'Glyma.18G120100' => 'gma', 'Glyma.20G176000' => 'gma', 'Gohir.A01G063600' => 'ghi', 'Gohir.A01G170301' => 'ghi', 'Gohir.A02G060500' => 'ghi', 'Gohir.A05G133850' => 'ghi', 'Gohir.A05G161400' => 'ghi', 'Gohir.A06G012900' => 'ghi', 'Gohir.A06G035901' => 'ghi', 'Gohir.A06G127100' => 'ghi', 'Gohir.A06G210500' => 'ghi', 'Gohir.A08G008650' => 'ghi', 'Gohir.A09G072700' => 'ghi', 'Gohir.A09G088301' => 'ghi', 'Gohir.A10G040600' => 'ghi', 'Gohir.A12G036300' => 'ghi', 'Gohir.A12G143350' => 'ghi', 'Gohir.A12G165500' => 'ghi', 'Gohir.A13G145700' => 'ghi', 'Gohir.D01G050000' => 'ghi', 'Gohir.D01G051366' => 'ghi', 'Gohir.D01G161350' => 'ghi', 'Gohir.D02G065900' => 'ghi', 'Gohir.D05G164200' => 'ghi', 'Gohir.D05G355500' => 'ghi', 'Gohir.D06G010400' => 'ghi', 'Gohir.D06G111250' => 'ghi', 'Gohir.D06G132000' => 'ghi', 'Gohir.D06G210500' => 'ghi', 'Gohir.D07G165675' => 'ghi', 'Gohir.D08G062240' => 'ghi', 'Gohir.D08G086101' => 'ghi', 'Gohir.D08G138060' => 'ghi', 'Gohir.D09G072300' => 'ghi', 'Gohir.D10G041400' => 'ghi', 'Gohir.D11G191020' => 'ghi', 'Gohir.D11G212066' => 'ghi', 'Gohir.D12G036300' => 'ghi', 'Gohir.D12G168600' => 'ghi', 'Gohir.D13G150600' => 'ghi', 'Gorai.001G057300' => 'gra', 'Gorai.002G069900' => 'gra', 'Gorai.002G200000' => 'gra', 'Gorai.003G067600' => 'gra', 'Gorai.005G074800' => 'gra', 'Gorai.006G087300' => 'gra', 'Gorai.008G037500' => 'gra', 'Gorai.008G181400' => 'gra', 'Gorai.009G169400' => 'gra', 'Gorai.009G387900' => 'gra', 'Gorai.010G013300' => 'gra', 'Gorai.010G153800' => 'gra', 'Gorai.010G255800' => 'gra', 'Gorai.011G043700' => 'gra', 'Gorai.011G198900' => 'gra', 'Gorai.013G168400' => 'gra', 'GSVIVG01005212001' => 'vvi', 'GSVIVG01006163001' => 'vvi', 'GSVIVG01009625001' => 'vvi', 'GSVIVG01014338001' => 'vvi', 'GSVIVG01020005001' => 'vvi', 'GSVIVG01021450001' => 'vvi', 'GSVIVG01023975001' => 'vvi', 'GSVIVG01034490001' => 'vvi', 'HanXRQChr04g0112071' => 'han', 'HanXRQChr05g0131151' => 'han', 'HanXRQChr09g0262371' => 'han', 'HanXRQChr09g0268401' => 'han', 'HanXRQChr10g0279241' => 'han', 'HanXRQChr10g0297961' => 'han', 'HanXRQChr11g0326231' => 'han', 'HanXRQChr11g0328471' => 'han', 'HanXRQChr16g0507941' => 'han', 'HanXRQChr17g0560211' => 'han', 'Haze_02108' => 'cav', 'Haze_02428' => 'cav', 'Haze_05593' => 'cav', 'Haze_06448' => 'cav', 'Haze_09427' => 'cav', 'Haze_12022' => 'cav', 'Haze_17612' => 'cav', 'Haze_17928' => 'cav', 'Hma1.2p1_0032F.1_g019250' => 'hma', 'Hma1.2p1_0163F.1_g072690' => 'hma', 'Hma1.2p1_0265F.1_g106710' => 'hma', 'Hma1.2p1_0286F.1_g113970' => 'hma', 'Hma1.2p1_0363F.1_g136640' => 'hma', 'Hma1.2p1_0584F.1_g183470' => 'hma', 'Hma1.2p1_0885F.1_g232570' => 'hma', 'HPP92_006022' => 'vpl', 'HPP92_007320' => 'vpl', 'HPP92_011521' => 'vpl', 'HPP92_019387' => 'vpl', 'HPP92_024038' => 'vpl', 'Hund05891' => 'sun', 'Hund06450' => 'sun', 'Hund12053' => 'sun', 'Hund16800' => 'sun', 'Hund21222' => 'sun', 'Hund22896' => 'sun', 'Hund23746' => 'sun', 'Hund27083' => 'sun', 'Lalb_Chr02g0141831' => 'lal', 'Lalb_Chr02g0141841' => 'lal', 'Lalb_Chr05g0220411' => 'lal', 'Lalb_Chr06g0162081' => 'lal', 'Lalb_Chr09g0327651' => 'lal', 'Lalb_Chr13g0295051' => 'lal', 'Lalb_Chr15g0086801' => 'lal', 'Lalb_Chr16g0383781' => 'lal', 'Lalb_Chr16g0383791' => 'lal', 'Lalb_Chr18g0055441' => 'lal', 'Lalb_Chr18g0059611' => 'lal', 'Lalb_Chr20g0109661' => 'lal', 'Lalb_Chr20g0109831' => 'lal', 'Lalb_Chr20g0121871' => 'lal', 'Lalb_Chr22g0355361' => 'lal', 'Lalb_Chr25g0286371' => 'lal', 'Lj1A1187G43' => 'lonja', 'Lj1A1205T50' => 'lonja', 'Lj1A800G33' => 'lonja', 'Lj1C1187T7' => 'lonja', 'Lj1C843T11' => 'lonja', 'Lj1g0010940' => 'lja', 'Lj2A288T69' => 'lonja', 'Lj3g0024276' => 'lja', 'Lj4A47T76' => 'lonja', 'Lj4g0005805' => 'lja', 'Lj4g0006097' => 'lja', 'Lj4g0008528' => 'lja', 'Lj4g0024907' => 'lja', 'Lj5g0012472' => 'lja', 'Lj5g0018648' => 'lja', 'Lj6C789G1' => 'lonja', 'Lj6g0004000' => 'lja', 'Lj7A292G67' => 'lonja', 'Lj7A292T64' => 'lonja', 'Lj9A400T58' => 'lonja', 'Lsat_1_v5_gn_1_126181' => 'lsa', 'Lsat_1_v5_gn_4_123041' => 'lsa', 'Lsat_1_v5_gn_4_133620' => 'lsa', 'Lsat_1_v5_gn_4_53221' => 'lsa', 'Lsat_1_v5_gn_4_71961' => 'lsa', 'Lsat_1_v5_gn_7_105241' => 'lsa', 'Lsat_1_v5_gn_7_21361' => 'lsa', 'Lsat_1_v5_gn_7_28860' => 'lsa', 'Lsat_1_v5_gn_7_31260' => 'lsa', 'Lsat_1_v5_gn_8_52801' => 'lsa', 'Manes.02G191400' => 'mes', 'Manes.03G110100' => 'mes', 'Manes.04G071100' => 'mes', 'Manes.05G100500' => 'mes', 'Manes.05G164700' => 'mes', 'Manes.15G087000' => 'mes', 'Manes.15G121500' => 'mes', 'Manes.16G028300' => 'mes', 'Manes.17G046100' => 'mes', 'Manes.17G069800' => 'mes', 'Manes.18G100500' => 'mes', 'Mapoly0002s0109' => 'mpo', 'Mapoly0024s0007' => 'mpo', 'Mapoly0089s0032' => 'mpo', 'MBI04_g42241_MAGBIO' => 'mbi', 'MBI05_g11988_MAGBIO' => 'mbi', 'MBI05_g35452_MAGBIO' => 'mbi', 'MBI07_g30179_MAGBIO' => 'mbi', 'MBI07_g35859_MAGBIO' => 'mbi', 'MBI07_g35860_MAGBIO' => 'mbi', 'MBI07_g37166_MAGBIO' => 'mbi', 'MBI08_g18172_MAGBIO' => 'mbi', 'MBI09_g08441_MAGBIO' => 'mbi', 'MBI13_g01676_MAGBIO' => 'mbi', 'MBI14_g42955_MAGBIO' => 'mbi', 'MBI16_g13161_MAGBIO' => 'mbi', 'MBI17_g27204_MAGBIO' => 'mbi', 'MBI19_g21595_MAGBIO' => 'mbi', 'MD00G1148400' => 'mdo', 'MD02G1301200' => 'mdo', 'MD03G1227800' => 'mdo', 'MD05G1041100' => 'mdo', 'MD05G1124800' => 'mdo', 'MD05G1284000' => 'mdo', 'MD05G1338800' => 'mdo', 'MD05G1338900' => 'mdo', 'MD07G1022800' => 'mdo', 'MD10G1047500' => 'mdo', 'MD10G1127500' => 'mdo', 'MD10G1262300' => 'mdo', 'MD10G1293800' => 'mdo', 'MD16G1074300' => 'mdo', 'Medtr1g021670' => 'mtr', 'Medtr1g096320' => 'mtr', 'Medtr2g013690' => 'mtr', 'Medtr2g019450' => 'mtr', 'Medtr2g085170' => 'mtr', 'Medtr4g088785' => 'mtr', 'Medtr8g055930' => 'mtr', 'Medtr8g085850' => 'mtr', 'MELO3C002605.2' => 'cme', 'MELO3C003891.2' => 'cme', 'MELO3C004012.2' => 'cme', 'MELO3C007134.2' => 'cme', 'MELO3C008118.2' => 'cme', 'MELO3C016700.2' => 'cme', 'MELO3C024127.2' => 'cme', 'MELO3C033361.2' => 'cme', 'MELO3C033362.2' => 'cme', 'Migut.C00430' => 'egut', 'Migut.C01246' => 'egut', 'Migut.E00101' => 'egut', 'Migut.H01486' => 'egut', 'Migut.H01939' => 'egut', 'Migut.K00360' => 'egut', 'Migut.M00910' => 'egut', 'Migut.M01139' => 'egut', 'Migut.N02677' => 'egut', 'MSTRG.13252' => 'ama', 'MSTRG.14701' => 'ama', 'MSTRG.1521' => 'ama', 'MSTRG.15884' => 'ama', 'MSTRG.16242' => 'ama', 'MSTRG.22285' => 'ama', 'MSTRG.22444' => 'ama', 'MSTRG.2349' => 'ama', 'MSTRG.26308' => 'ama', 'MSTRG.28296' => 'ama', 'MSTRG.9895' => 'ama', 'Nitab4.5_0000110g0060' => 'nta', 'Nitab4.5_0000420g0130' => 'nta', 'Nitab4.5_0000422g0030' => 'nta', 'Nitab4.5_0000560g0180' => 'nta', 'Nitab4.5_0000703g0100' => 'nta', 'Nitab4.5_0000786g0200' => 'nta', 'Nitab4.5_0001336g0020' => 'nta', 'Nitab4.5_0001796g0030' => 'nta', 'Nitab4.5_0003348g0060' => 'nta', 'Nitab4.5_0003698g0040' => 'nta', 'Nitab4.5_0003942g0090' => 'nta', 'Nitab4.5_0004775g0070' => 'nta', 'Nitab4.5_0004864g0030' => 'nta', 'Nitab4.5_0005615g0020' => 'nta', 'Nitab4.5_0009288g0030' => 'nta', 'Nitab4.5_0009341g0010' => 'nta', 'Nitab4.5_0009535g0010' => 'nta', 'Nn1g03995' => 'nnu', 'Nn1g04100' => 'nnu', 'Nn1g06530' => 'nnu', 'Nn3g16404' => 'nnu', 'Nn3g17212' => 'nnu', 'Nn3g20776' => 'nnu', 'Nn3g21923' => 'nnu', 'Nn5g27737' => 'nnu', 'Nn5g29461' => 'nnu', 'Nn7g38355' => 'nnu', 'Nn8g39873' => 'nnu', 'Oeu000548.2' => 'oeu', 'Oeu004672.1' => 'oeu', 'Oeu015605.2' => 'oeu', 'Oeu016092.1' => 'oeu', 'Oeu017879.3' => 'oeu', 'Oeu024910.1' => 'oeu', 'Oeu028965.1' => 'oeu', 'Oeu031269.1' => 'oeu', 'Oeu031270.1' => 'oeu', 'Oeu032535.1' => 'oeu', 'Oeu034151.1' => 'oeu', 'Oeu034152.1' => 'oeu', 'Oeu034588.2' => 'oeu', 'Oeu050846.1' => 'oeu', 'Oeu050849.2' => 'oeu', 'Oeu051063.2' => 'oeu', 'Oeu052368.1' => 'oeu', 'Oeu052370.1' => 'oeu', 'Os01g0210400' => 'osa', 'Os01g0304300' => 'osa', 'Os01g0749100' => 'osa', 'Os02g0745800' => 'osa', 'Os03g0769050' => 'osa', 'Os05g0531500' => 'osa', 'Os06g0724300' => 'osa', 'Os11g0198100' => 'osa', 'Peaxi162Scf00069g01425' => 'pax', 'Peaxi162Scf00280g00811' => 'pax', 'Peaxi162Scf00310g00615' => 'pax', 'Peaxi162Scf00362g00542' => 'pax', 'Peaxi162Scf00461g00310' => 'pax', 'Peaxi162Scf00530g00118' => 'pax', 'Peaxi162Scf00541g00057' => 'pax', 'Peaxi162Scf00661g00017' => 'pax', 'Peaxi162Scf00926g00027' => 'pax', 'Peaxi162Scf01064g00263' => 'pax', 'Peaxi162Scf01211g00135' => 'pax', 'PGR004G2336' => 'pgr', 'PGR042G0327' => 'pgr', 'PGR042G1957' => 'pgr', 'PGR042G2003' => 'pgr', 'PGR042G3929' => 'pgr', 'PGR083G1137' => 'pgr', 'PGR083G1364' => 'pgr', 'PGSC0003DMG400003381' => 'stu', 'PGSC0003DMG400003417' => 'stu', 'PGSC0003DMG400008981' => 'stu', 'PGSC0003DMG400012417' => 'stu', 'PGSC0003DMG400012823' => 'stu', 'PGSC0003DMG400016885' => 'stu', 'PGSC0003DMG400022812' => 'stu', 'PGSC0003DMG400029726' => 'stu', 'PGSC0003DMG401009243' => 'stu', 'PGSC0003DMG401031505' => 'stu', 'PGSC0003DMG402031505' => 'stu', 'Phvul.001G017600' => 'pvu', 'Phvul.002G193500' => 'pvu', 'Phvul.002G228900' => 'pvu', 'Phvul.002G236800' => 'pvu', 'Phvul.003G049500' => 'pvu', 'Phvul.005G072000' => 'pvu', 'Phvul.006G164800' => 'pvu', 'Phvul.006G185100' => 'pvu', 'Phvul.007G090000' => 'pvu', 'Potri.001G399800' => 'ptr', 'Potri.002G149900' => 'ptr', 'Potri.004G044100' => 'ptr', 'Potri.004G177600' => 'ptr', 'Potri.009G138000' => 'ptr', 'Potri.010G094000' => 'ptr', 'Potri.011G053000' => 'ptr', 'Potri.011G119300' => 'ptr', 'Potri.013G113700' => 'ptr', 'Potri.018G107800' => 'ptr', 'Potri.019G084100' => 'ptr', 'Pp3c14_23720' => 'ppa', 'Pp3c16_6340' => 'ppa', 'Pp3c23_13420' => 'ppa', 'Pp3c24_2740' => 'ppa', 'Pp3c25_860' => 'ppa', 'Pp3c8_21750' => 'ppa', 'Prupe.1G273000' => 'ppe', 'Prupe.1G273700' => 'ppe', 'Prupe.1G274100' => 'ppe', 'Prupe.2G023300' => 'ppe', 'Prupe.4G048000' => 'ppe', 'Prupe.4G080400' => 'ppe', 'Prupe.4G181200' => 'ppe', 'Prupe.8G056900' => 'ppe', 'Prupe.8G168700' => 'ppe', 'Psat1g189080' => 'psa', 'Psat1g204760' => 'psa', 'Psat4g175560' => 'psa', 'Psat4g177720' => 'psa', 'Psat5g244240' => 'psa', 'Psat6g010720' => 'psa', 'Psat6g187200' => 'psa', 'Psat7g072040' => 'psa', 'PSO017G3501' => 'pso', 'PSO063G2148' => 'pso', 'PSO063G5608' => 'pso', 'PSO210G6392' => 'pso', 'PSO541G2319' => 'pso', 'PSO541G2836' => 'pso', 'PSO541G4012' => 'pso', 'PSO541G6253' => 'pso', 'PSO675G0580' => 'pso', 'PSO675G0856' => 'pso', 'PSO675G5635' => 'pso', 'PSO675G9157' => 'pso', 'PSO832G1660' => 'pso', 'PSO832G1969' => 'pso', 'QL02p007186' => 'qlo', 'QL02p033904' => 'qlo', 'QL03p064391' => 'qlo', 'QL05p040593' => 'qlo', 'QL05p058242' => 'qlo', 'QL08p021825' => 'qlo', 'QL11p004981' => 'qlo', 'RcHm_v2.0_Chr1g0318301' => 'rch', 'RcHm_v2.0_Chr4g0418501' => 'rch', 'RcHm_v2.0_Chr4g0439971' => 'rch', 'RcHm_v2.0_Chr5g0008541' => 'rch', 'RcHm_v2.0_Chr5g0014101' => 'rch', 'RcHm_v2.0_Chr5g0014131' => 'rch', 'RcHm_v2.0_Chr5g0033621' => 'rch', 'RcHm_v2.0_Chr6g0272041' => 'rch', 'RcHm_v2.0_Chr6g0278831' => 'rch', 'Rhsim02G0130400' => 'rsi', 'Rhsim02G0171100' => 'rsi', 'Rhsim05G0053000' => 'rsi', 'Rhsim05G0053100' => 'rsi', 'Rhsim06G0096500' => 'rsi', 'Rhsim06G0096600' => 'rsi', 'Rhsim06G0199100' => 'rsi', 'Rhsim12G0062300' => 'rsi', 'Rhsim12G0062800' => 'rsi', 'Sabra02G0118600' => 'sbr', 'Sabra04G0027300' => 'sbr', 'Sabra04G0119500' => 'sbr', 'Sabra08G0112500' => 'sbr', 'Sabra11G0036800' => 'sbr', 'Sabra11G0103800' => 'sbr', 'Sabra13G0096300' => 'sbr', 'Sabra16G0262300' => 'sbr', 'Sabra18G0091700' => 'sbr', 'Sabra19G0095400' => 'sbr', 'SalBow6G3080' => 'sbo', 'SalBow7G1157' => 'sbo', 'SalBow7G2123' => 'sbo', 'SalBow7G2285' => 'sbo', 'SalBow7G3537' => 'sbo', 'SalBow8G2947' => 'sbo', 'SalBow8G4463' => 'sbo', 'SalBow8G5466' => 'sbo', 'Sc01g0001750' => 'sci', 'Sc02g0006640' => 'sci', 'Sc02g0006670' => 'sci', 'Sc04g0008220' => 'sci', 'Sc05g0006190' => 'sci', 'Sc08g0002760' => 'sci', 'Sc17g0006170' => 'sci', 'Sc22g0002050' => 'sci', 'Sc23g0001190' => 'sci', 'Sc24g0000980' => 'sci', 'Sed0006245' => 'sed', 'Sed0007543' => 'sed', 'Sed0009411' => 'sed', 'Sed0010765' => 'sed', 'Sed0012944' => 'sed', 'Sed0014682' => 'sed', 'Sed0016174' => 'sed', 'Sed0016796' => 'sed', 'Sed0020317' => 'sed', 'Sed0021467' => 'sed', 'SEGI_01316' => 'sgi', 'SEGI_03374' => 'sgi', 'SEGI_16265' => 'sgi', 'SEGI_18569' => 'sgi', 'SEGI_20351' => 'sgi', 'SEGI_26395' => 'sgi', 'SEGI_29469' => 'sgi', 'SEGI_34771' => 'sgi', 'SEGI_36769' => 'sgi', 'SEGI_37139' => 'sgi', 'SGA_v2.0_scaffold100G29687' => 'sas', 'SGA_v2.0_scaffold118G32472' => 'sas', 'SGA_v2.0_scaffold14G07051' => 'sas', 'SGA_v2.0_scaffold183G39845' => 'sas', 'SGA_v2.0_scaffold1G00174' => 'sas', 'SGA_v2.0_scaffold22G09714' => 'sas', 'SGA_v2.0_scaffold333G48992' => 'sas', 'SGA_v2.0_scaffold46G17491' => 'sas', 'SGA_v2.0_scaffold49G18294' => 'sas', 'SGA_v2.0_scaffold63G21658' => 'sas', 'SHI01741' => 'shi', 'SHI05771' => 'shi', 'SHI18077' => 'shi', 'SHI20525' => 'shi', 'SHI20527' => 'shi', 'SHI20528' => 'shi', 'SMO172G0185' => 'smo', 'SMO198G0020' => 'smo', 'SMO351G0006' => 'smo', 'SMO356G0118' => 'smo', 'SMO358G0296' => 'smo', 'SMO367G0079' => 'smo', 'SMO367G1277' => 'smo', 'Solyc01g014220.3' => 'sly', 'Solyc01g111770.2' => 'sly', 'Solyc02g078180.3' => 'sly', 'Solyc03g006430.3' => 'sly', 'Solyc03g006456.1' => 'sly', 'Solyc03g079860.2' => 'sly', 'Solyc04g079770.3' => 'sly', 'Solyc05g007430.4' => 'sly', 'Solyc07g063150.3' => 'sly', 'Solyc08g016620.3' => 'sly', 'Solyc09g057590.3' => 'sly', 'Solyc09g057600.1' => 'sly', 'Solyc10g009050.3' => 'sly', 'Solyc11g017420.2' => 'sly', 'Sopen01g053810' => 'spe', 'Sopen02g023040' => 'spe', 'Sopen03g002440' => 'spe', 'Sopen04g033350' => 'spe', 'Sopen05g003310' => 'spe', 'Sopen07g004050' => 'spe', 'Sopen07g031340' => 'spe', 'Sopen08g006990' => 'spe', 'Sopen10g004830' => 'spe', 'Sopen11g009370' => 'spe', 'Sp1g24450' => 'spa', 'Sp1g29670' => 'spa', 'Sp1g39600' => 'spa', 'Sp2g11080' => 'spa', 'Sp2g13970' => 'spa', 'Sp4g16130' => 'spa', 'Sp6g13080' => 'spa', 'Sp7g37270' => 'spa', 'TAR371G0065' => 'tar', 'TAR376G0340' => 'tar', 'TAR376G0435' => 'tar', 'TAR381G0002' => 'tar', 'TAR381G1236' => 'tar', 'TAR624G0055' => 'tar', 'TAR624G0324' => 'tar', 'TAR624G0696' => 'tar', 'TAR624G0906' => 'tar', 'TAR625G0107' => 'tar', 'TAR626G0015' => 'tar', 'TAR626G1356' => 'tar', 'TAR627G0888' => 'tar', 'TAR628G0399' => 'tar', 'TAR628G1327' => 'tar', 'TAR629G2831' => 'tar', 'TAR629G2874' => 'tar', 'TAR633G1432' => 'tar', 'TAR633G2771' => 'tar', 'THA.LOC104803394' => 'tha', 'THA.LOC104805153' => 'tha', 'THA.LOC104806784' => 'tha', 'THA.LOC104810473' => 'tha', 'THA.LOC104813100' => 'tha', 'THA.LOC104814215' => 'tha', 'THA.LOC104815554' => 'tha', 'THA.LOC104820544' => 'tha', 'THA.LOC104824754' => 'tha', 'THA.LOC104827717' => 'tha', 'Thecc.02G031400' => 'tca', 'Thecc.02G055900' => 'tca', 'Thecc.02G350800' => 'tca', 'Thecc.06G150900' => 'tca', 'Thecc.06G186600' => 'tca', 'Thecc.07G089600' => 'tca', 'Thecc.08G020400' => 'tca', 'Thecc.08G182100' => 'tca', 'Thhalv10000873m.g' => 'esa', 'Thhalv10004185m.g' => 'esa', 'Thhalv10006981m.g' => 'esa', 'Thhalv10007204m.g' => 'esa', 'Thhalv10011374m.g' => 'esa', 'Thhalv10013482m.g' => 'esa', 'Thhalv10017801m.g' => 'esa', 'Thhalv10024983m.g' => 'esa', 'TPR.G12072' => 'tpr', 'TPR.G15769' => 'tpr', 'TPR.G16504' => 'tpr', 'TPR.G16506' => 'tpr', 'TPR.G24345' => 'tpr', 'TPR.G26666' => 'tpr', 'TPR.G27320' => 'tpr', 'TPR.G31819' => 'tpr', 'TPR.G38879' => 'tpr', 'TPR.G39015' => 'tpr', 'TPR.G8819' => 'tpr', 'TWI09G0924' => 'twi', 'TWI12G0811' => 'twi', 'TWI12G1294' => 'twi', 'TWI31G0150' => 'twi', 'TWI36G1262' => 'twi', 'TWI38G1287' => 'twi', 'TWI38G1633' => 'twi', 'TWI38G1982' => 'twi', 'TWI39G0116' => 'twi', 'TWI60G1011' => 'twi', 'TWI63G0171' => 'twi', 'TWI73G0839' => 'twi', 'TWI79G1511' => 'twi', 'unitig_0.g915' => 'ugi', 'unitig_0.g916' => 'ugi', 'unitig_21.g20219' => 'ugi', 'unitig_21.g20416' => 'ugi', 'unitig_578.g16132' => 'ugi', 'unitig_578.g16718' => 'ugi', 'unitig_62.g23481' => 'ugi', 'unitig_744.g24535' => 'ugi', 'unitig_749.g13525' => 'ugi', 'vmacro01248' => 'vma', 'vmacro02290' => 'vma', 'vmacro10946' => 'vma', 'vmacro11865' => 'vma', 'vmacro12493' => 'vma', 'vmacro17322' => 'vma', 'vmacro21599' => 'vma', 'vmacro23041' => 'vma', 'VMungo0251G0004' => 'vmu', 'VMungo0251G2639' => 'vmu', 'VMungo0251G2967' => 'vmu', 'VMungo0540G0864' => 'vmu', 'VMungo0540G1569' => 'vmu', 'VMungo0647G0317' => 'vmu', 'VMungo0720G1373' => 'vmu', 'VMungo0720G1508' => 'vmu', 'VMungo1080G0485' => 'vmu', 'VMungo1215G3177' => 'vmu', 'Zm00001eb112600' => 'zma', 'Zm00001eb120220' => 'zma', 'Zm00001eb153240' => 'zma', 'Zm00001eb168880' => 'zma', 'Zm00001eb213920' => 'zma', 'Zm00001eb228280' => 'zma', 'Zm00001eb254580' => 'zma', 'Zm00001eb272180' => 'zma', 'Zm00001eb293190' => 'zma', 'Zm00001eb322930' => 'zma', 'Zm00001eb353360' => 'zma', 'Zm00001eb353390' => 'zma', 'Zm00001eb353430' => 'zma', 'Zm00001eb353440' => 'zma', 'Zm00001eb353780' => 'zma' ) $gf_id = 'HOM05D000499' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000499' ) $data_identifier = 'HOM05D000499' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 29, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 12, 'amhyb' => (int) 8, 'aly' => (int) 12, 'aox' => (int) 9, 'arhy' => (int) 26, 'ath' => (int) 8, 'atr' => (int) 7, 'acertr' => (int) 10, 'cqu' => (int) 15, 'bca' => (int) 29, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 11, 'cansat' => (int) 8, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 9, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 8, 'cpa' => (int) 10, 'csa' => (int) 7, 'camsi' => (int) 20, 'dca' => (int) 8, 'din' => (int) 12, 'dzi' => (int) 14, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 6, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 38, 'gra' => (int) 16, 'vvi' => (int) 8, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 5, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 11, 'lja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 11, 'mpo' => (int) 3, 'mbi' => (int) 14, 'mdo' => (int) 14, 'mtr' => (int) 8, 'cme' => (int) 9, 'egut' => (int) 9, 'ama' => (int) 11, 'nta' => (int) 17, 'nnu' => (int) 11, 'oeu' => (int) 18, 'osa' => (int) 8, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 6, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 9, 'rsi' => (int) 9, 'sbr' => (int) 10, 'sbo' => (int) 8, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 10, 'sas' => (int) 10, 'shi' => (int) 6, 'smo' => (int) 7, 'sly' => (int) 14, 'spe' => (int) 10, 'spa' => (int) 8, 'tar' => (int) 19, 'tha' => (int) 10, 'tca' => (int) 8, 'esa' => (int) 8, 'tpr' => (int) 11, 'twi' => (int) 13, 'ugi' => (int) 9, 'vma' => (int) 8, 'vmu' => (int) 10, 'zma' => (int) 15 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb353780' $species_info = array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ) $local_species = 'bna' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000499', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1066', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p29780' => 'bna', 'A02p33180' => 'bna', 'A03p16470' => 'bna', 'A03p66010' => 'bna', 'A04p25970' => 'bna', 'A06p01270' => 'bna', 'A06p46080' => 'bna', 'A07p11400' => 'bna', 'A08p01840' => 'bna', 'A08p08230' => 'bna', 'A08p25740' => 'bna', 'A09p32070' => 'bna', 'A09p37830' => 'bna', 'A09p42840' => 'bna', 'A09p42850' => 'bna', 'Aa31LG10G2060' => 'aar', 'Aa31LG2G7410' => 'aar', 'Aa31LG6G10200' => 'aar', 'Aa31LG6G16680' => 'aar', 'Aa31LG6G8470' => 'aar', 'Aa31LG9G12730' => 'aar', 'Aa31LG9G13680' => 'aar', 'Aa31LG9G14920' => 'aar', 'Aa31LG9G6650' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4977' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5467' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3254' => 'aag', 'Actinidia02578' => 'ach', 'Actinidia07693' => 'ach', 'Actinidia08413' => 'ach', 'Actinidia08414' => 'ach', 'Actinidia15289' => 'ach', 'Actinidia19871' => 'ach', 'Actinidia21475' => 'ach', 'Actinidia22576' => 'ach', 'Actinidia28327' => 'ach', 'Actinidia32491' => 'ach', 'Actinidia39463' => 'ach', 'Actinidia39571' => 'ach', 'Ah.01g013750' => 'amhyb', 'Ah.01g023210' => 'amhyb', 'Ah.04g164850' => 'amhyb', 'Ah.05g178060' => 'amhyb', 'Ah.07g204270' => 'amhyb', 'Ah.07g208480' => 'amhyb', 'Ah.09g237410' => 'amhyb', 'Ah.14g089460' => 'amhyb', 'AL1G41790' => 'aly', 'AL1G49050' => 'aly', 'AL1G53810' => 'aly', 'AL1G61400' => 'aly', 'AL4G18580' => 'aly', 'AL5G12510' => 'aly', 'AL5G12540' => 'aly', 'AL6G43230' => 'aly', 'AL7G10370' => 'aly', 'AL7G19250' => 'aly', 'AL8G12240' => 'aly', 'AL8G18540' => 'aly', 'Aqoxy1G02409' => 'aox', 'Aqoxy2G03993' => 'aox', 'Aqoxy3G03357' => 'aox', 'Aqoxy4G00785' => 'aox', 'Aqoxy5G02598' => 'aox', 'Aqoxy6G00132' => 'aox', 'Aqoxy7G01776' => 'aox', 'Aqoxy7G02316' => 'aox', 'Aqoxy7G03973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.12AFKW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B8730' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27IQR1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3F75VG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3RE0GA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41TCQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.527VTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FIR39' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5W8UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DA38EV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ63HS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H1I32C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HC27T5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4M8AP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7N3CZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9UVDZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LS1NQA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT1D4B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SKC4TM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCFV76' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF9Q1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQWD9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1ZM88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WE07RT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YCK7VH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJE6Q6' => 'arhy', 'AT1G28240' => 'ath', 'AT1G34550' => 'ath', 'AT1G53040' => 'ath', 'AT2G02910' => 'ath', 'AT4G09630' => 'ath', 'AT4G38500' => 'ath', 'AT5G42660' => 'ath', 'AT5G46220' => 'ath', 'ATR0152G026' => 'atr', 'ATR0564G343' => 'atr', 'ATR0706G151' => 'atr', 'ATR0733G207' => 'atr', 'ATR0751G234' => 'atr', 'ATR0807G048' => 'atr', 'ATR1091G084' => 'atr', 'Atru.chr10.1229' => 'acertr', 'Atru.chr10.1230' => 'acertr', 'Atru.chr10.1874' => 'acertr', 'Atru.chr11.1808' => 'acertr', 'Atru.chr13.1795' => 'acertr', 'Atru.chr13.570' => 'acertr', 'Atru.chr2.2608' => 'acertr', 'Atru.chr2.2609' => 'acertr', 'Atru.chr5.3428' => 'acertr', 'Atru.chr8.1171' => 'acertr', 'AUR62004651' => 'cqu', 'AUR62008675' => 'cqu', 'AUR62010014' => 'cqu', 'AUR62013004' => 'cqu', 'AUR62014825' => 'cqu', 'AUR62015015' => 'cqu', 'AUR62015151' => 'cqu', 'AUR62017020' => 'cqu', 'AUR62019422' => 'cqu', 'AUR62023570' => 'cqu', 'AUR62025571' => 'cqu', 'AUR62029098' => 'cqu', 'AUR62033863' => 'cqu', 'AUR62034296' => 'cqu', 'AUR62040075' => 'cqu', 'BcaB02g07334' => 'bca', 'BcaB02g10575' => 'bca', 'BcaB03g12119' => 'bca', 'BcaB03g12120' => 'bca', 'BcaB03g13945' => 'bca', 'BcaB04g17123' => 'bca', 'BcaB04g17867' => 'bca', 'BcaB04g19839' => 'bca', 'BcaB07g30317' => 'bca', 'BcaB07g32432' => 'bca', 'BcaB07g33362' => 'bca', 'BcaB08g36611' => 'bca', 'BcaC01g00028' => 'bca', 'BcaC01g01356' => 'bca', 'BcaC01g02034' => 'bca', 'BcaC01g06051' => 'bca', 'BcaC03g16839' => 'bca', 'BcaC03g17176' => 'bca', 'BcaC05g26829' => 'bca', 'BcaC06g31490' => 'bca', 'BcaC06g35344' => 'bca', 'BcaC06g36570' => 'bca', 'BcaC07g37537' => 'bca', 'BcaC08g43491' => 'bca', 'BcaC08g43773' => 'bca', 'BcaNung00234' => 'bca', 'BcaNung01982' => 'bca', 'BcaNung03707' => 'bca', 'BcaNung06454' => 'bca', 'BolC2t10762H' => 'bol', 'BolC2t11191H' => 'bol', 'BolC3t14322H' => 'bol', 'BolC3t19747H' => 'bol', 'BolC3t21425H' => 'bol', 'BolC4t27800H' => 'bol', 'BolC5t31423H' => 'bol', 'BolC6t35951H' => 'bol', 'BolC6t36282H' => 'bol', 'BolC7t40678H' => 'bol', 'BolC7t40679H' => 'bol', 'BolC7t42222H' => 'bol', 'BolC7t43492H' => 'bol', 'BolC7t46785H' => 'bol', 'BolC8t47853H' => 'bol', 'BolC9t56805H' => 'bol', 'BraA02t08000Z' => 'bra', 'BraA02t08341Z' => 'bra', 'BraA03t10936Z' => 'bra', 'BraA03t15657Z' => 'bra', 'BraA04t18100Z' => 'bra', 'BraA05t20523Z' => 'bra', 'BraA06t23353Z' => 'bra', 'BraA06t27473Z' => 'bra', 'BraA06t27769Z' => 'bra', 'BraA07t28928Z' => 'bra', 'BraA08t32236Z' => 'bra', 'BraA08t32841Z' => 'bra', 'BraA08t34524Z' => 'bra', 'BraA09t38742Z' => 'bra', 'BraA09t39295Z' => 'bra', 'C02p47180' => 'bna', 'C02p50990' => 'bna', 'C03p19360' => 'bna', 'C03p74950' => 'bna', 'C03p91000' => 'bna', 'C04p63260' => 'bna', 'C05p27050' => 'bna', 'C06p08750' => 'bna', 'C06p11490' => 'bna', 'C07p02820' => 'bna', 'C07p17180' => 'bna', 'C07p29440' => 'bna', 'C07p63730' => 'bna', 'C09p39260' => 'bna', 'CAN.G1164.34' => 'can', 'CAN.G1164.39' => 'can', 'CAN.G1530.3' => 'can', 'CAN.G162.61' => 'can', 'CAN.G176.6' => 'can', 'CAN.G289.49' => 'can', 'CAN.G370.21' => 'can', 'CAN.G370.22' => 'can', 'CAN.G371.117' => 'can', 'CAN.G58.37' => 'can', 'CAN.G588.98' => 'can', 'CANSAT21G2266' => 'cansat', 'CANSAT25G2799' => 'cansat', 'CANSAT35G0862' => 'cansat', 'CANSAT35G1704' => 'cansat', 'CANSAT35G1760' => 'cansat', 'CANSAT56G3971' => 'cansat', 'CANSAT56G4116' => 'cansat', 'CANSAT80G1259' => 'cansat', 'CARHR027730' => 'chi', 'CARHR033880' => 'chi', 'CARHR043270' => 'chi', 'CARHR145330' => 'chi', 'CARHR145340' => 'chi', 'CARHR175570' => 'chi', 'CARHR181570' => 'chi', 'CARHR258470' => 'chi', 'CARHR260490' => 'chi', 'CARHR294220' => 'chi', 'Carub.0001s2668' => 'cru', 'Carub.0001s3257' => 'cru', 'Carub.0001s4220' => 'cru', 'Carub.0005s0179' => 'cru', 'Carub.0006s2807' => 'cru', 'Carub.0007s0039' => 'cru', 'Carub.0008s0169' => 'cru', 'Carub.0008s0636' => 'cru', 'Ca_00338_v3' => 'car', 'Ca_00542_v3' => 'car', 'Ca_01844_v3' => 'car', 'Ca_10611_v3' => 'car', 'Ca_13326_v3' => 'car', 'Ca_17944_v3' => 'car', 'Ca_18546_v3' => 'car', 'Ca_24219_v3' => 'car', 'Ca_29972_v3' => 'car', 'CBR_g3681' => 'cbr', 'CBR_g40021' => 'cbr', 'Cc01_g08140' => 'ccan', 'Cc02_g13410' => 'ccan', 'Cc02_g37480' => 'ccan', 'Cc05_g12030' => 'ccan', 'Cc09_g03370' => 'ccan', 'Cc09_g10300' => 'ccan', 'Cc10_g03530' => 'ccan', 'Cc10_g11380' => 'ccan', 'CDE01G0176' => 'cde', 'CDE02G0675' => 'cde', 'CDE02G0942' => 'cde', 'CDE02G1153' => 'cde', 'CDE02G4177' => 'cde', 'CDE04G2117' => 'cde', 'CDE04G2736' => 'cde', 'CDE08G1161' => 'cde', 'CDE09G1238' => 'cde', 'Cfa000467' => 'cfa', 'Cfa000947' => 'cfa', 'Cfa004969' => 'cfa', 'Cfa005284' => 'cfa', 'Cfa008993' => 'cfa', 'Cfa018187' => 'cfa', 'Cfa018454' => 'cfa', 'Cfa020585' => 'cfa', 'Ciclev10000424m.g' => 'ccl', 'Ciclev10003605m.g' => 'ccl', 'Ciclev10007828m.g' => 'ccl', 'Ciclev10014620m.g' => 'ccl', 'Ciclev10015169m.g' => 'ccl', 'Ciclev10018291m.g' => 'ccl', 'Ciclev10028256m.g' => 'ccl', 'Ciclev10033822m.g' => 'ccl', 'CiPaw.05G060300' => 'cil', 'CiPaw.05G085000' => 'cil', 'CiPaw.06G083700' => 'cil', 'CiPaw.06G120300' => 'cil', 'CiPaw.09G060500' => 'cil', 'CiPaw.09G123800' => 'cil', 'CiPaw.11G169700' => 'cil', 'CiPaw.12G118300' => 'cil', 'CiPaw.15G071000' => 'cil', 'CiPaw.15G081900' => 'cil', 'ClCG01G024610' => 'cla', 'ClCG03G006070' => 'cla', 'ClCG05G019250' => 'cla', 'ClCG09G009500' => 'cla', 'ClCG11G008200' => 'cla', 'ClCG11G018080' => 'cla', 'COL.COLO4_17373' => 'col', 'COL.COLO4_22994' => 'col', 'COL.COLO4_26389' => 'col', 'COL.COLO4_27170' => 'col', 'COL.COLO4_31074' => 'col', 'COL.COLO4_31465' => 'col', 'COL.COLO4_36438' => 'col', 'COL.COLO4_36439' => 'col', 'Cpa.g.c38781' => 'cpa', 'Cpa.g.sc128.12' => 'cpa', 'Cpa.g.sc166.7' => 'cpa', 'Cpa.g.sc166.8' => 'cpa', 'Cpa.g.sc20.111' => 'cpa', 'Cpa.g.sc27.31' => 'cpa', 'Cpa.g.sc64.36' => 'cpa', 'Cpa.g.sc64.37' => 'cpa', 'Cpa.g.sc66.49' => 'cpa', 'Cpa.g.sc80.64' => 'cpa', 'CsaV3_1G012320' => 'csa', 'CsaV3_2G008480' => 'csa', 'CsaV3_2G033450' => 'csa', 'CsaV3_3G044830' => 'csa', 'CsaV3_4G033710' => 'csa', 'CsaV3_6G051730' => 'csa', 'CsaV3_7G025350' => 'csa', 'CSS0001067' => 'camsi', 'CSS0005996' => 'camsi', 'CSS0006590' => 'camsi', 'CSS0009673' => 'camsi', 'CSS0010201' => 'camsi', 'CSS0010549' => 'camsi', 'CSS0011364' => 'camsi', 'CSS0014473' => 'camsi', 'CSS0014961' => 'camsi', 'CSS0020191' => 'camsi', 'CSS0021165' => 'camsi', 'CSS0022306' => 'camsi', 'CSS0030591' => 'camsi', 'CSS0030696' => 'camsi', 'CSS0032653' => 'camsi', 'CSS0037487' => 'camsi', 'CSS0041102' => 'camsi', 'CSS0041261' => 'camsi', 'CSS0046246' => 'camsi', 'CSS0049256' => 'camsi', 'DCAR_004075' => 'dca', 'DCAR_011538' => 'dca', 'DCAR_019553' => 'dca', 'DCAR_020952' => 'dca', 'DCAR_021739' => 'dca', 'DCAR_027407' => 'dca', 'DCAR_027913' => 'dca', 'DCAR_028066' => 'dca', 'Dinv05899' => 'din', 'Dinv07563' => 'din', 'Dinv08010' => 'din', 'Dinv14125' => 'din', 'Dinv20172' => 'din', 'Dinv30743' => 'din', 'Dinv31229' => 'din', 'Dinv34162' => 'din', 'Dinv36028' => 'din', 'Dinv39368' => 'din', 'Dinv40565' => 'din', 'Dinv41706' => 'din', 'Duzib052G0089' => 'dzi', 'Duzib116G0641' => 'dzi', 'Duzib132G0069' => 'dzi', 'Duzib132G1219' => 'dzi', 'Duzib147G0278' => 'dzi', 'Duzib160G0480' => 'dzi', 'Duzib170G0661' => 'dzi', 'Duzib177G0591' => 'dzi', 'Duzib187G1353' => 'dzi', 'Duzib192G0858' => 'dzi', 'Duzib192G0883' => 'dzi', 'Duzib213G0506' => 'dzi', 'Duzib235G0289' => 'dzi', 'Duzib251G0422' => 'dzi', 'ECA232G3898' => 'eca', 'ECA233G5950' => 'eca', 'ECA234G1699' => 'eca', 'ECA234G2421' => 'eca', 'ECA236G0426' => 'eca', 'ECA236G4331' => 'eca', 'ECA248G2573' => 'eca', 'EL10Ac1g00077' => 'bvu', 'EL10Ac1g01746' => 'bvu', 'EL10Ac2g03464' => 'bvu', 'EL10Ac4g08176' => 'bvu', 'EL10Ac7g17521' => 'bvu', 'EL10Ac8g20386' => 'bvu', 'EL10Ac9g21343' => 'bvu', 'EL10Ac9g22688' => 'bvu', 'Eucgr.B03434' => 'egr', 'Eucgr.D00618' => 'egr', 'Eucgr.E02395' => 'egr', 'Eucgr.F01129' => 'egr', 'Eucgr.F02622' => 'egr', 'Eucgr.F04207' => 'egr', 'FAN01G0570' => 'fan', 'FAN03G3351' => 'fan', 'FAN06G3702' => 'fan', 'FAN07G2149' => 'fan', 'FAN10G3758' => 'fan', 'FAN11G1170' => 'fan', 'FAN11G2050' => 'fan', 'FAN11G2724' => 'fan', 'FAN12G1700' => 'fan', 'FAN12G2028' => 'fan', 'FAN15G1160' => 'fan', 'FAN15G3063' => 'fan', 'FAN16G2540' => 'fan', 'FAN16G3077' => 'fan', 'FAN16G3624' => 'fan', 'FAN17G0221' => 'fan', 'FAN20G2492' => 'fan', 'FAN20G2905' => 'fan', 'FAN21G0548' => 'fan', 'FAN21G1300' => 'fan', 'FAN22G0077' => 'fan', 'FAN22G1315' => 'fan', 'FAN24G1280' => 'fan', 'FAN24G1445' => 'fan', 'FAN24G3527' => 'fan', 'FAN25G0464' => 'fan', 'FAN25G2885' => 'fan', 'FAN25G3270' => 'fan', 'FAN27G1101' => 'fan', 'FAN27G2846' => 'fan', 'FAN27G3524' => 'fan', 'FvH4_2g11770' => 'fve', 'FvH4_2g15630' => 'fve', 'FvH4_3g05570' => 'fve', 'FvH4_3g09110' => 'fve', 'FvH4_3g19940' => 'fve', 'FvH4_4g04821' => 'fve', 'FvH4_4g31480' => 'fve', 'FvH4_7g01740' => 'fve', 'Glyma.05G130400' => 'gma', 'Glyma.05G156400' => 'gma', 'Glyma.07G197000' => 'gma', 'Glyma.08G085151' => 'gma', 'Glyma.08G114500' => 'gma', 'Glyma.08G300400' => 'gma', 'Glyma.10G215800' => 'gma', 'Glyma.12G224400' => 'gma', 'Glyma.13G179300' => 'gma', 'Glyma.13G218151' => 'gma', 'Glyma.13G238800' => 'gma', 'Glyma.13G276900' => 'gma', 'Glyma.14G078200' => 'gma', 'Glyma.15G074500' => 'gma', 'Glyma.15G094100' => 'gma', 'Glyma.17G247200' => 'gma', 'Glyma.18G120100' => 'gma', 'Glyma.20G176000' => 'gma', 'Gohir.A01G063600' => 'ghi', 'Gohir.A01G170301' => 'ghi', 'Gohir.A02G060500' => 'ghi', 'Gohir.A05G133850' => 'ghi', 'Gohir.A05G161400' => 'ghi', 'Gohir.A06G012900' => 'ghi', 'Gohir.A06G035901' => 'ghi', 'Gohir.A06G127100' => 'ghi', 'Gohir.A06G210500' => 'ghi', 'Gohir.A08G008650' => 'ghi', 'Gohir.A09G072700' => 'ghi', 'Gohir.A09G088301' => 'ghi', 'Gohir.A10G040600' => 'ghi', 'Gohir.A12G036300' => 'ghi', 'Gohir.A12G143350' => 'ghi', 'Gohir.A12G165500' => 'ghi', 'Gohir.A13G145700' => 'ghi', 'Gohir.D01G050000' => 'ghi', 'Gohir.D01G051366' => 'ghi', 'Gohir.D01G161350' => 'ghi', 'Gohir.D02G065900' => 'ghi', 'Gohir.D05G164200' => 'ghi', 'Gohir.D05G355500' => 'ghi', 'Gohir.D06G010400' => 'ghi', 'Gohir.D06G111250' => 'ghi', 'Gohir.D06G132000' => 'ghi', 'Gohir.D06G210500' => 'ghi', 'Gohir.D07G165675' => 'ghi', 'Gohir.D08G062240' => 'ghi', 'Gohir.D08G086101' => 'ghi', 'Gohir.D08G138060' => 'ghi', 'Gohir.D09G072300' => 'ghi', 'Gohir.D10G041400' => 'ghi', 'Gohir.D11G191020' => 'ghi', 'Gohir.D11G212066' => 'ghi', 'Gohir.D12G036300' => 'ghi', 'Gohir.D12G168600' => 'ghi', 'Gohir.D13G150600' => 'ghi', 'Gorai.001G057300' => 'gra', 'Gorai.002G069900' => 'gra', 'Gorai.002G200000' => 'gra', 'Gorai.003G067600' => 'gra', 'Gorai.005G074800' => 'gra', 'Gorai.006G087300' => 'gra', 'Gorai.008G037500' => 'gra', 'Gorai.008G181400' => 'gra', 'Gorai.009G169400' => 'gra', 'Gorai.009G387900' => 'gra', 'Gorai.010G013300' => 'gra', 'Gorai.010G153800' => 'gra', 'Gorai.010G255800' => 'gra', 'Gorai.011G043700' => 'gra', 'Gorai.011G198900' => 'gra', 'Gorai.013G168400' => 'gra', 'GSVIVG01005212001' => 'vvi', 'GSVIVG01006163001' => 'vvi', 'GSVIVG01009625001' => 'vvi', 'GSVIVG01014338001' => 'vvi', 'GSVIVG01020005001' => 'vvi', 'GSVIVG01021450001' => 'vvi', 'GSVIVG01023975001' => 'vvi', 'GSVIVG01034490001' => 'vvi', 'HanXRQChr04g0112071' => 'han', 'HanXRQChr05g0131151' => 'han', 'HanXRQChr09g0262371' => 'han', 'HanXRQChr09g0268401' => 'han', 'HanXRQChr10g0279241' => 'han', 'HanXRQChr10g0297961' => 'han', 'HanXRQChr11g0326231' => 'han', 'HanXRQChr11g0328471' => 'han', 'HanXRQChr16g0507941' => 'han', 'HanXRQChr17g0560211' => 'han', 'Haze_02108' => 'cav', 'Haze_02428' => 'cav', 'Haze_05593' => 'cav', 'Haze_06448' => 'cav', 'Haze_09427' => 'cav', 'Haze_12022' => 'cav', 'Haze_17612' => 'cav', 'Haze_17928' => 'cav', 'Hma1.2p1_0032F.1_g019250' => 'hma', 'Hma1.2p1_0163F.1_g072690' => 'hma', 'Hma1.2p1_0265F.1_g106710' => 'hma', 'Hma1.2p1_0286F.1_g113970' => 'hma', 'Hma1.2p1_0363F.1_g136640' => 'hma', 'Hma1.2p1_0584F.1_g183470' => 'hma', 'Hma1.2p1_0885F.1_g232570' => 'hma', 'HPP92_006022' => 'vpl', 'HPP92_007320' => 'vpl', 'HPP92_011521' => 'vpl', 'HPP92_019387' => 'vpl', 'HPP92_024038' => 'vpl', 'Hund05891' => 'sun', 'Hund06450' => 'sun', 'Hund12053' => 'sun', 'Hund16800' => 'sun', 'Hund21222' => 'sun', 'Hund22896' => 'sun', 'Hund23746' => 'sun', 'Hund27083' => 'sun', 'Lalb_Chr02g0141831' => 'lal', 'Lalb_Chr02g0141841' => 'lal', 'Lalb_Chr05g0220411' => 'lal', 'Lalb_Chr06g0162081' => 'lal', 'Lalb_Chr09g0327651' => 'lal', 'Lalb_Chr13g0295051' => 'lal', 'Lalb_Chr15g0086801' => 'lal', 'Lalb_Chr16g0383781' => 'lal', 'Lalb_Chr16g0383791' => 'lal', 'Lalb_Chr18g0055441' => 'lal', 'Lalb_Chr18g0059611' => 'lal', 'Lalb_Chr20g0109661' => 'lal', 'Lalb_Chr20g0109831' => 'lal', 'Lalb_Chr20g0121871' => 'lal', 'Lalb_Chr22g0355361' => 'lal', 'Lalb_Chr25g0286371' => 'lal', 'Lj1A1187G43' => 'lonja', 'Lj1A1205T50' => 'lonja', 'Lj1A800G33' => 'lonja', 'Lj1C1187T7' => 'lonja', 'Lj1C843T11' => 'lonja', 'Lj1g0010940' => 'lja', 'Lj2A288T69' => 'lonja', 'Lj3g0024276' => 'lja', 'Lj4A47T76' => 'lonja', 'Lj4g0005805' => 'lja', 'Lj4g0006097' => 'lja', 'Lj4g0008528' => 'lja', 'Lj4g0024907' => 'lja', 'Lj5g0012472' => 'lja', 'Lj5g0018648' => 'lja', 'Lj6C789G1' => 'lonja', 'Lj6g0004000' => 'lja', 'Lj7A292G67' => 'lonja', 'Lj7A292T64' => 'lonja', 'Lj9A400T58' => 'lonja', 'Lsat_1_v5_gn_1_126181' => 'lsa', 'Lsat_1_v5_gn_4_123041' => 'lsa', 'Lsat_1_v5_gn_4_133620' => 'lsa', 'Lsat_1_v5_gn_4_53221' => 'lsa', 'Lsat_1_v5_gn_4_71961' => 'lsa', 'Lsat_1_v5_gn_7_105241' => 'lsa', 'Lsat_1_v5_gn_7_21361' => 'lsa', 'Lsat_1_v5_gn_7_28860' => 'lsa', 'Lsat_1_v5_gn_7_31260' => 'lsa', 'Lsat_1_v5_gn_8_52801' => 'lsa', 'Manes.02G191400' => 'mes', 'Manes.03G110100' => 'mes', 'Manes.04G071100' => 'mes', 'Manes.05G100500' => 'mes', 'Manes.05G164700' => 'mes', 'Manes.15G087000' => 'mes', 'Manes.15G121500' => 'mes', 'Manes.16G028300' => 'mes', 'Manes.17G046100' => 'mes', 'Manes.17G069800' => 'mes', 'Manes.18G100500' => 'mes', 'Mapoly0002s0109' => 'mpo', 'Mapoly0024s0007' => 'mpo', 'Mapoly0089s0032' => 'mpo', 'MBI04_g42241_MAGBIO' => 'mbi', 'MBI05_g11988_MAGBIO' => 'mbi', 'MBI05_g35452_MAGBIO' => 'mbi', 'MBI07_g30179_MAGBIO' => 'mbi', 'MBI07_g35859_MAGBIO' => 'mbi', 'MBI07_g35860_MAGBIO' => 'mbi', 'MBI07_g37166_MAGBIO' => 'mbi', 'MBI08_g18172_MAGBIO' => 'mbi', 'MBI09_g08441_MAGBIO' => 'mbi', 'MBI13_g01676_MAGBIO' => 'mbi', 'MBI14_g42955_MAGBIO' => 'mbi', 'MBI16_g13161_MAGBIO' => 'mbi', 'MBI17_g27204_MAGBIO' => 'mbi', 'MBI19_g21595_MAGBIO' => 'mbi', 'MD00G1148400' => 'mdo', 'MD02G1301200' => 'mdo', 'MD03G1227800' => 'mdo', 'MD05G1041100' => 'mdo', 'MD05G1124800' => 'mdo', 'MD05G1284000' => 'mdo', 'MD05G1338800' => 'mdo', 'MD05G1338900' => 'mdo', 'MD07G1022800' => 'mdo', 'MD10G1047500' => 'mdo', 'MD10G1127500' => 'mdo', 'MD10G1262300' => 'mdo', 'MD10G1293800' => 'mdo', 'MD16G1074300' => 'mdo', 'Medtr1g021670' => 'mtr', 'Medtr1g096320' => 'mtr', 'Medtr2g013690' => 'mtr', 'Medtr2g019450' => 'mtr', 'Medtr2g085170' => 'mtr', 'Medtr4g088785' => 'mtr', 'Medtr8g055930' => 'mtr', 'Medtr8g085850' => 'mtr', 'MELO3C002605.2' => 'cme', 'MELO3C003891.2' => 'cme', 'MELO3C004012.2' => 'cme', 'MELO3C007134.2' => 'cme', 'MELO3C008118.2' => 'cme', 'MELO3C016700.2' => 'cme', 'MELO3C024127.2' => 'cme', 'MELO3C033361.2' => 'cme', 'MELO3C033362.2' => 'cme', 'Migut.C00430' => 'egut', 'Migut.C01246' => 'egut', 'Migut.E00101' => 'egut', 'Migut.H01486' => 'egut', 'Migut.H01939' => 'egut', 'Migut.K00360' => 'egut', 'Migut.M00910' => 'egut', 'Migut.M01139' => 'egut', 'Migut.N02677' => 'egut', 'MSTRG.13252' => 'ama', 'MSTRG.14701' => 'ama', 'MSTRG.1521' => 'ama', 'MSTRG.15884' => 'ama', 'MSTRG.16242' => 'ama', 'MSTRG.22285' => 'ama', 'MSTRG.22444' => 'ama', 'MSTRG.2349' => 'ama', 'MSTRG.26308' => 'ama', 'MSTRG.28296' => 'ama', 'MSTRG.9895' => 'ama', 'Nitab4.5_0000110g0060' => 'nta', 'Nitab4.5_0000420g0130' => 'nta', 'Nitab4.5_0000422g0030' => 'nta', 'Nitab4.5_0000560g0180' => 'nta', 'Nitab4.5_0000703g0100' => 'nta', 'Nitab4.5_0000786g0200' => 'nta', 'Nitab4.5_0001336g0020' => 'nta', 'Nitab4.5_0001796g0030' => 'nta', 'Nitab4.5_0003348g0060' => 'nta', 'Nitab4.5_0003698g0040' => 'nta', 'Nitab4.5_0003942g0090' => 'nta', 'Nitab4.5_0004775g0070' => 'nta', 'Nitab4.5_0004864g0030' => 'nta', 'Nitab4.5_0005615g0020' => 'nta', 'Nitab4.5_0009288g0030' => 'nta', 'Nitab4.5_0009341g0010' => 'nta', 'Nitab4.5_0009535g0010' => 'nta', 'Nn1g03995' => 'nnu', 'Nn1g04100' => 'nnu', 'Nn1g06530' => 'nnu', 'Nn3g16404' => 'nnu', 'Nn3g17212' => 'nnu', 'Nn3g20776' => 'nnu', 'Nn3g21923' => 'nnu', 'Nn5g27737' => 'nnu', 'Nn5g29461' => 'nnu', 'Nn7g38355' => 'nnu', 'Nn8g39873' => 'nnu', 'Oeu000548.2' => 'oeu', 'Oeu004672.1' => 'oeu', 'Oeu015605.2' => 'oeu', 'Oeu016092.1' => 'oeu', 'Oeu017879.3' => 'oeu', 'Oeu024910.1' => 'oeu', 'Oeu028965.1' => 'oeu', 'Oeu031269.1' => 'oeu', 'Oeu031270.1' => 'oeu', 'Oeu032535.1' => 'oeu', 'Oeu034151.1' => 'oeu', 'Oeu034152.1' => 'oeu', 'Oeu034588.2' => 'oeu', 'Oeu050846.1' => 'oeu', 'Oeu050849.2' => 'oeu', 'Oeu051063.2' => 'oeu', 'Oeu052368.1' => 'oeu', 'Oeu052370.1' => 'oeu', 'Os01g0210400' => 'osa', 'Os01g0304300' => 'osa', 'Os01g0749100' => 'osa', 'Os02g0745800' => 'osa', 'Os03g0769050' => 'osa', 'Os05g0531500' => 'osa', 'Os06g0724300' => 'osa', 'Os11g0198100' => 'osa', 'Peaxi162Scf00069g01425' => 'pax', 'Peaxi162Scf00280g00811' => 'pax', 'Peaxi162Scf00310g00615' => 'pax', 'Peaxi162Scf00362g00542' => 'pax', 'Peaxi162Scf00461g00310' => 'pax', 'Peaxi162Scf00530g00118' => 'pax', 'Peaxi162Scf00541g00057' => 'pax', 'Peaxi162Scf00661g00017' => 'pax', 'Peaxi162Scf00926g00027' => 'pax', 'Peaxi162Scf01064g00263' => 'pax', 'Peaxi162Scf01211g00135' => 'pax', 'PGR004G2336' => 'pgr', 'PGR042G0327' => 'pgr', 'PGR042G1957' => 'pgr', 'PGR042G2003' => 'pgr', 'PGR042G3929' => 'pgr', 'PGR083G1137' => 'pgr', 'PGR083G1364' => 'pgr', 'PGSC0003DMG400003381' => 'stu', 'PGSC0003DMG400003417' => 'stu', 'PGSC0003DMG400008981' => 'stu', 'PGSC0003DMG400012417' => 'stu', 'PGSC0003DMG400012823' => 'stu', 'PGSC0003DMG400016885' => 'stu', 'PGSC0003DMG400022812' => 'stu', 'PGSC0003DMG400029726' => 'stu', 'PGSC0003DMG401009243' => 'stu', 'PGSC0003DMG401031505' => 'stu', 'PGSC0003DMG402031505' => 'stu', 'Phvul.001G017600' => 'pvu', 'Phvul.002G193500' => 'pvu', 'Phvul.002G228900' => 'pvu', 'Phvul.002G236800' => 'pvu', 'Phvul.003G049500' => 'pvu', 'Phvul.005G072000' => 'pvu', 'Phvul.006G164800' => 'pvu', 'Phvul.006G185100' => 'pvu', 'Phvul.007G090000' => 'pvu', 'Potri.001G399800' => 'ptr', 'Potri.002G149900' => 'ptr', 'Potri.004G044100' => 'ptr', 'Potri.004G177600' => 'ptr', 'Potri.009G138000' => 'ptr', 'Potri.010G094000' => 'ptr', 'Potri.011G053000' => 'ptr', 'Potri.011G119300' => 'ptr', 'Potri.013G113700' => 'ptr', 'Potri.018G107800' => 'ptr', 'Potri.019G084100' => 'ptr', 'Pp3c14_23720' => 'ppa', 'Pp3c16_6340' => 'ppa', 'Pp3c23_13420' => 'ppa', 'Pp3c24_2740' => 'ppa', 'Pp3c25_860' => 'ppa', 'Pp3c8_21750' => 'ppa', 'Prupe.1G273000' => 'ppe', 'Prupe.1G273700' => 'ppe', 'Prupe.1G274100' => 'ppe', 'Prupe.2G023300' => 'ppe', 'Prupe.4G048000' => 'ppe', 'Prupe.4G080400' => 'ppe', 'Prupe.4G181200' => 'ppe', 'Prupe.8G056900' => 'ppe', 'Prupe.8G168700' => 'ppe', 'Psat1g189080' => 'psa', 'Psat1g204760' => 'psa', 'Psat4g175560' => 'psa', 'Psat4g177720' => 'psa', 'Psat5g244240' => 'psa', 'Psat6g010720' => 'psa', 'Psat6g187200' => 'psa', 'Psat7g072040' => 'psa', 'PSO017G3501' => 'pso', 'PSO063G2148' => 'pso', 'PSO063G5608' => 'pso', 'PSO210G6392' => 'pso', 'PSO541G2319' => 'pso', 'PSO541G2836' => 'pso', 'PSO541G4012' => 'pso', 'PSO541G6253' => 'pso', 'PSO675G0580' => 'pso', 'PSO675G0856' => 'pso', 'PSO675G5635' => 'pso', 'PSO675G9157' => 'pso', 'PSO832G1660' => 'pso', 'PSO832G1969' => 'pso', 'QL02p007186' => 'qlo', 'QL02p033904' => 'qlo', 'QL03p064391' => 'qlo', 'QL05p040593' => 'qlo', 'QL05p058242' => 'qlo', 'QL08p021825' => 'qlo', 'QL11p004981' => 'qlo', 'RcHm_v2.0_Chr1g0318301' => 'rch', 'RcHm_v2.0_Chr4g0418501' => 'rch', 'RcHm_v2.0_Chr4g0439971' => 'rch', 'RcHm_v2.0_Chr5g0008541' => 'rch', 'RcHm_v2.0_Chr5g0014101' => 'rch', 'RcHm_v2.0_Chr5g0014131' => 'rch', 'RcHm_v2.0_Chr5g0033621' => 'rch', 'RcHm_v2.0_Chr6g0272041' => 'rch', 'RcHm_v2.0_Chr6g0278831' => 'rch', 'Rhsim02G0130400' => 'rsi', 'Rhsim02G0171100' => 'rsi', 'Rhsim05G0053000' => 'rsi', 'Rhsim05G0053100' => 'rsi', 'Rhsim06G0096500' => 'rsi', 'Rhsim06G0096600' => 'rsi', 'Rhsim06G0199100' => 'rsi', 'Rhsim12G0062300' => 'rsi', 'Rhsim12G0062800' => 'rsi', 'Sabra02G0118600' => 'sbr', 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'Solyc03g079860.2' => 'sly', 'Solyc04g079770.3' => 'sly', 'Solyc05g007430.4' => 'sly', 'Solyc07g063150.3' => 'sly', 'Solyc08g016620.3' => 'sly', 'Solyc09g057590.3' => 'sly', 'Solyc09g057600.1' => 'sly', 'Solyc10g009050.3' => 'sly', 'Solyc11g017420.2' => 'sly', 'Sopen01g053810' => 'spe', 'Sopen02g023040' => 'spe', 'Sopen03g002440' => 'spe', 'Sopen04g033350' => 'spe', 'Sopen05g003310' => 'spe', 'Sopen07g004050' => 'spe', 'Sopen07g031340' => 'spe', 'Sopen08g006990' => 'spe', 'Sopen10g004830' => 'spe', 'Sopen11g009370' => 'spe', 'Sp1g24450' => 'spa', 'Sp1g29670' => 'spa', 'Sp1g39600' => 'spa', 'Sp2g11080' => 'spa', 'Sp2g13970' => 'spa', 'Sp4g16130' => 'spa', 'Sp6g13080' => 'spa', 'Sp7g37270' => 'spa', 'TAR371G0065' => 'tar', 'TAR376G0340' => 'tar', 'TAR376G0435' => 'tar', 'TAR381G0002' => 'tar', 'TAR381G1236' => 'tar', 'TAR624G0055' => 'tar', 'TAR624G0324' => 'tar', 'TAR624G0696' => 'tar', 'TAR624G0906' => 'tar', 'TAR625G0107' => 'tar', 'TAR626G0015' => 'tar', 'TAR626G1356' => 'tar', 'TAR627G0888' => 'tar', 'TAR628G0399' => 'tar', 'TAR628G1327' => 'tar', 'TAR629G2831' => 'tar', 'TAR629G2874' => 'tar', 'TAR633G1432' => 'tar', 'TAR633G2771' => 'tar', 'THA.LOC104803394' => 'tha', 'THA.LOC104805153' => 'tha', 'THA.LOC104806784' => 'tha', 'THA.LOC104810473' => 'tha', 'THA.LOC104813100' => 'tha', 'THA.LOC104814215' => 'tha', 'THA.LOC104815554' => 'tha', 'THA.LOC104820544' => 'tha', 'THA.LOC104824754' => 'tha', 'THA.LOC104827717' => 'tha', 'Thecc.02G031400' => 'tca', 'Thecc.02G055900' => 'tca', 'Thecc.02G350800' => 'tca', 'Thecc.06G150900' => 'tca', 'Thecc.06G186600' => 'tca', 'Thecc.07G089600' => 'tca', 'Thecc.08G020400' => 'tca', 'Thecc.08G182100' => 'tca', 'Thhalv10000873m.g' => 'esa', 'Thhalv10004185m.g' => 'esa', 'Thhalv10006981m.g' => 'esa', 'Thhalv10007204m.g' => 'esa', 'Thhalv10011374m.g' => 'esa', 'Thhalv10013482m.g' => 'esa', 'Thhalv10017801m.g' => 'esa', 'Thhalv10024983m.g' => 'esa', 'TPR.G12072' => 'tpr', 'TPR.G15769' => 'tpr', 'TPR.G16504' => 'tpr', 'TPR.G16506' => 'tpr', 'TPR.G24345' => 'tpr', 'TPR.G26666' => 'tpr', 'TPR.G27320' => 'tpr', 'TPR.G31819' => 'tpr', 'TPR.G38879' => 'tpr', 'TPR.G39015' => 'tpr', 'TPR.G8819' => 'tpr', 'TWI09G0924' => 'twi', 'TWI12G0811' => 'twi', 'TWI12G1294' => 'twi', 'TWI31G0150' => 'twi', 'TWI36G1262' => 'twi', 'TWI38G1287' => 'twi', 'TWI38G1633' => 'twi', 'TWI38G1982' => 'twi', 'TWI39G0116' => 'twi', 'TWI60G1011' => 'twi', 'TWI63G0171' => 'twi', 'TWI73G0839' => 'twi', 'TWI79G1511' => 'twi', 'unitig_0.g915' => 'ugi', 'unitig_0.g916' => 'ugi', 'unitig_21.g20219' => 'ugi', 'unitig_21.g20416' => 'ugi', 'unitig_578.g16132' => 'ugi', 'unitig_578.g16718' => 'ugi', 'unitig_62.g23481' => 'ugi', 'unitig_744.g24535' => 'ugi', 'unitig_749.g13525' => 'ugi', 'vmacro01248' => 'vma', 'vmacro02290' => 'vma', 'vmacro10946' => 'vma', 'vmacro11865' => 'vma', 'vmacro12493' => 'vma', 'vmacro17322' => 'vma', 'vmacro21599' => 'vma', 'vmacro23041' => 'vma', 'VMungo0251G0004' => 'vmu', 'VMungo0251G2639' => 'vmu', 'VMungo0251G2967' => 'vmu', 'VMungo0540G0864' => 'vmu', 'VMungo0540G1569' => 'vmu', 'VMungo0647G0317' => 'vmu', 'VMungo0720G1373' => 'vmu', 'VMungo0720G1508' => 'vmu', 'VMungo1080G0485' => 'vmu', 'VMungo1215G3177' => 'vmu', 'Zm00001eb112600' => 'zma', 'Zm00001eb120220' => 'zma', 'Zm00001eb153240' => 'zma', 'Zm00001eb168880' => 'zma', 'Zm00001eb213920' => 'zma', 'Zm00001eb228280' => 'zma', 'Zm00001eb254580' => 'zma', 'Zm00001eb272180' => 'zma', 'Zm00001eb293190' => 'zma', 'Zm00001eb322930' => 'zma', 'Zm00001eb353360' => 'zma', 'Zm00001eb353390' => 'zma', 'Zm00001eb353430' => 'zma', 'Zm00001eb353440' => 'zma', 'Zm00001eb353780' => 'zma' ), 'gf_id' => 'HOM05D000499', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000499' ), 'data_identifier' => 'HOM05D000499', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000499', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1066', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p29780' => 'bna', 'A02p33180' => 'bna', 'A03p16470' => 'bna', 'A03p66010' => 'bna', 'A04p25970' => 'bna', 'A06p01270' => 'bna', 'A06p46080' => 'bna', 'A07p11400' => 'bna', 'A08p01840' => 'bna', 'A08p08230' => 'bna', 'A08p25740' => 'bna', 'A09p32070' => 'bna', 'A09p37830' => 'bna', 'A09p42840' => 'bna', 'A09p42850' => 'bna', 'Aa31LG10G2060' => 'aar', 'Aa31LG2G7410' => 'aar', 'Aa31LG6G10200' => 'aar', 'Aa31LG6G16680' => 'aar', 'Aa31LG6G8470' => 'aar', 'Aa31LG9G12730' => 'aar', 'Aa31LG9G13680' => 'aar', 'Aa31LG9G14920' => 'aar', 'Aa31LG9G6650' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4977' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5467' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3254' => 'aag', 'Actinidia02578' => 'ach', 'Actinidia07693' => 'ach', 'Actinidia08413' => 'ach', 'Actinidia08414' => 'ach', 'Actinidia15289' => 'ach', 'Actinidia19871' => 'ach', 'Actinidia21475' => 'ach', 'Actinidia22576' => 'ach', 'Actinidia28327' => 'ach', 'Actinidia32491' => 'ach', 'Actinidia39463' => 'ach', 'Actinidia39571' => 'ach', 'Ah.01g013750' => 'amhyb', 'Ah.01g023210' => 'amhyb', 'Ah.04g164850' => 'amhyb', 'Ah.05g178060' => 'amhyb', 'Ah.07g204270' => 'amhyb', 'Ah.07g208480' => 'amhyb', 'Ah.09g237410' => 'amhyb', 'Ah.14g089460' => 'amhyb', 'AL1G41790' => 'aly', 'AL1G49050' => 'aly', 'AL1G53810' => 'aly', 'AL1G61400' => 'aly', 'AL4G18580' => 'aly', 'AL5G12510' => 'aly', 'AL5G12540' => 'aly', 'AL6G43230' => 'aly', 'AL7G10370' => 'aly', 'AL7G19250' => 'aly', 'AL8G12240' => 'aly', 'AL8G18540' => 'aly', 'Aqoxy1G02409' => 'aox', 'Aqoxy2G03993' => 'aox', 'Aqoxy3G03357' => 'aox', 'Aqoxy4G00785' => 'aox', 'Aqoxy5G02598' => 'aox', 'Aqoxy6G00132' => 'aox', 'Aqoxy7G01776' => 'aox', 'Aqoxy7G02316' => 'aox', 'Aqoxy7G03973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.12AFKW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B8730' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27IQR1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3F75VG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3RE0GA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41TCQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.527VTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FIR39' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5W8UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DA38EV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ63HS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H1I32C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HC27T5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4M8AP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7N3CZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9UVDZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LS1NQA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT1D4B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SKC4TM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCFV76' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF9Q1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQWD9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1ZM88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WE07RT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YCK7VH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJE6Q6' => 'arhy', 'AT1G28240' => 'ath', 'AT1G34550' => 'ath', 'AT1G53040' => 'ath', 'AT2G02910' => 'ath', 'AT4G09630' => 'ath', 'AT4G38500' => 'ath', 'AT5G42660' => 'ath', 'AT5G46220' => 'ath', 'ATR0152G026' => 'atr', 'ATR0564G343' => 'atr', 'ATR0706G151' => 'atr', 'ATR0733G207' => 'atr', 'ATR0751G234' => 'atr', 'ATR0807G048' => 'atr', 'ATR1091G084' => 'atr', 'Atru.chr10.1229' => 'acertr', 'Atru.chr10.1230' => 'acertr', 'Atru.chr10.1874' => 'acertr', 'Atru.chr11.1808' => 'acertr', 'Atru.chr13.1795' => 'acertr', 'Atru.chr13.570' => 'acertr', 'Atru.chr2.2608' => 'acertr', 'Atru.chr2.2609' => 'acertr', 'Atru.chr5.3428' => 'acertr', 'Atru.chr8.1171' => 'acertr', 'AUR62004651' => 'cqu', 'AUR62008675' => 'cqu', 'AUR62010014' => 'cqu', 'AUR62013004' => 'cqu', 'AUR62014825' => 'cqu', 'AUR62015015' => 'cqu', 'AUR62015151' => 'cqu', 'AUR62017020' => 'cqu', 'AUR62019422' => 'cqu', 'AUR62023570' => 'cqu', 'AUR62025571' => 'cqu', 'AUR62029098' => 'cqu', 'AUR62033863' => 'cqu', 'AUR62034296' => 'cqu', 'AUR62040075' => 'cqu', 'BcaB02g07334' => 'bca', 'BcaB02g10575' => 'bca', 'BcaB03g12119' => 'bca', 'BcaB03g12120' => 'bca', 'BcaB03g13945' => 'bca', 'BcaB04g17123' => 'bca', 'BcaB04g17867' => 'bca', 'BcaB04g19839' => 'bca', 'BcaB07g30317' => 'bca', 'BcaB07g32432' => 'bca', 'BcaB07g33362' => 'bca', 'BcaB08g36611' => 'bca', 'BcaC01g00028' => 'bca', 'BcaC01g01356' => 'bca', 'BcaC01g02034' => 'bca', 'BcaC01g06051' => 'bca', 'BcaC03g16839' => 'bca', 'BcaC03g17176' => 'bca', 'BcaC05g26829' => 'bca', 'BcaC06g31490' => 'bca', 'BcaC06g35344' => 'bca', 'BcaC06g36570' => 'bca', 'BcaC07g37537' => 'bca', 'BcaC08g43491' => 'bca', 'BcaC08g43773' => 'bca', 'BcaNung00234' => 'bca', 'BcaNung01982' => 'bca', 'BcaNung03707' => 'bca', 'BcaNung06454' => 'bca', 'BolC2t10762H' => 'bol', 'BolC2t11191H' => 'bol', 'BolC3t14322H' => 'bol', 'BolC3t19747H' => 'bol', 'BolC3t21425H' => 'bol', 'BolC4t27800H' => 'bol', 'BolC5t31423H' => 'bol', 'BolC6t35951H' => 'bol', 'BolC6t36282H' => 'bol', 'BolC7t40678H' => 'bol', 'BolC7t40679H' => 'bol', 'BolC7t42222H' => 'bol', 'BolC7t43492H' => 'bol', 'BolC7t46785H' => 'bol', 'BolC8t47853H' => 'bol', 'BolC9t56805H' => 'bol', 'BraA02t08000Z' => 'bra', 'BraA02t08341Z' => 'bra', 'BraA03t10936Z' => 'bra', 'BraA03t15657Z' => 'bra', 'BraA04t18100Z' => 'bra', 'BraA05t20523Z' => 'bra', 'BraA06t23353Z' => 'bra', 'BraA06t27473Z' => 'bra', 'BraA06t27769Z' => 'bra', 'BraA07t28928Z' => 'bra', 'BraA08t32236Z' => 'bra', 'BraA08t32841Z' => 'bra', 'BraA08t34524Z' => 'bra', 'BraA09t38742Z' => 'bra', 'BraA09t39295Z' => 'bra', 'C02p47180' => 'bna', 'C02p50990' => 'bna', 'C03p19360' => 'bna', 'C03p74950' => 'bna', 'C03p91000' => 'bna', 'C04p63260' => 'bna', 'C05p27050' => 'bna', 'C06p08750' => 'bna', 'C06p11490' => 'bna', 'C07p02820' => 'bna', 'C07p17180' => 'bna', 'C07p29440' => 'bna', 'C07p63730' => 'bna', 'C09p39260' => 'bna', 'CAN.G1164.34' => 'can', 'CAN.G1164.39' => 'can', 'CAN.G1530.3' => 'can', 'CAN.G162.61' => 'can', 'CAN.G176.6' => 'can', 'CAN.G289.49' => 'can', 'CAN.G370.21' => 'can', 'CAN.G370.22' => 'can', 'CAN.G371.117' => 'can', 'CAN.G58.37' => 'can', 'CAN.G588.98' => 'can', 'CANSAT21G2266' => 'cansat', 'CANSAT25G2799' => 'cansat', 'CANSAT35G0862' => 'cansat', 'CANSAT35G1704' => 'cansat', 'CANSAT35G1760' => 'cansat', 'CANSAT56G3971' => 'cansat', 'CANSAT56G4116' => 'cansat', 'CANSAT80G1259' => 'cansat', 'CARHR027730' => 'chi', 'CARHR033880' => 'chi', 'CARHR043270' => 'chi', 'CARHR145330' => 'chi', 'CARHR145340' => 'chi', 'CARHR175570' => 'chi', 'CARHR181570' => 'chi', 'CARHR258470' => 'chi', 'CARHR260490' => 'chi', 'CARHR294220' => 'chi', 'Carub.0001s2668' => 'cru', 'Carub.0001s3257' => 'cru', 'Carub.0001s4220' => 'cru', 'Carub.0005s0179' => 'cru', 'Carub.0006s2807' => 'cru', 'Carub.0007s0039' => 'cru', 'Carub.0008s0169' => 'cru', 'Carub.0008s0636' => 'cru', 'Ca_00338_v3' => 'car', 'Ca_00542_v3' => 'car', 'Ca_01844_v3' => 'car', 'Ca_10611_v3' => 'car', 'Ca_13326_v3' => 'car', 'Ca_17944_v3' => 'car', 'Ca_18546_v3' => 'car', 'Ca_24219_v3' => 'car', 'Ca_29972_v3' => 'car', 'CBR_g3681' => 'cbr', 'CBR_g40021' => 'cbr', 'Cc01_g08140' => 'ccan', 'Cc02_g13410' => 'ccan', 'Cc02_g37480' => 'ccan', 'Cc05_g12030' => 'ccan', 'Cc09_g03370' => 'ccan', 'Cc09_g10300' => 'ccan', 'Cc10_g03530' => 'ccan', 'Cc10_g11380' => 'ccan', 'CDE01G0176' => 'cde', 'CDE02G0675' => 'cde', 'CDE02G0942' => 'cde', 'CDE02G1153' => 'cde', 'CDE02G4177' => 'cde', 'CDE04G2117' => 'cde', 'CDE04G2736' => 'cde', 'CDE08G1161' => 'cde', 'CDE09G1238' => 'cde', 'Cfa000467' => 'cfa', 'Cfa000947' => 'cfa', 'Cfa004969' => 'cfa', 'Cfa005284' => 'cfa', 'Cfa008993' => 'cfa', 'Cfa018187' => 'cfa', 'Cfa018454' => 'cfa', 'Cfa020585' => 'cfa', 'Ciclev10000424m.g' => 'ccl', 'Ciclev10003605m.g' => 'ccl', 'Ciclev10007828m.g' => 'ccl', 'Ciclev10014620m.g' => 'ccl', 'Ciclev10015169m.g' => 'ccl', 'Ciclev10018291m.g' => 'ccl', 'Ciclev10028256m.g' => 'ccl', 'Ciclev10033822m.g' => 'ccl', 'CiPaw.05G060300' => 'cil', 'CiPaw.05G085000' => 'cil', 'CiPaw.06G083700' => 'cil', 'CiPaw.06G120300' => 'cil', 'CiPaw.09G060500' => 'cil', 'CiPaw.09G123800' => 'cil', 'CiPaw.11G169700' => 'cil', 'CiPaw.12G118300' => 'cil', 'CiPaw.15G071000' => 'cil', 'CiPaw.15G081900' => 'cil', 'ClCG01G024610' => 'cla', 'ClCG03G006070' => 'cla', 'ClCG05G019250' => 'cla', 'ClCG09G009500' => 'cla', 'ClCG11G008200' => 'cla', 'ClCG11G018080' => 'cla', 'COL.COLO4_17373' => 'col', 'COL.COLO4_22994' => 'col', 'COL.COLO4_26389' => 'col', 'COL.COLO4_27170' => 'col', 'COL.COLO4_31074' => 'col', 'COL.COLO4_31465' => 'col', 'COL.COLO4_36438' => 'col', 'COL.COLO4_36439' => 'col', 'Cpa.g.c38781' => 'cpa', 'Cpa.g.sc128.12' => 'cpa', 'Cpa.g.sc166.7' => 'cpa', 'Cpa.g.sc166.8' => 'cpa', 'Cpa.g.sc20.111' => 'cpa', 'Cpa.g.sc27.31' => 'cpa', 'Cpa.g.sc64.36' => 'cpa', 'Cpa.g.sc64.37' => 'cpa', 'Cpa.g.sc66.49' => 'cpa', 'Cpa.g.sc80.64' => 'cpa', 'CsaV3_1G012320' => 'csa', 'CsaV3_2G008480' => 'csa', 'CsaV3_2G033450' => 'csa', 'CsaV3_3G044830' => 'csa', 'CsaV3_4G033710' => 'csa', 'CsaV3_6G051730' => 'csa', 'CsaV3_7G025350' => 'csa', 'CSS0001067' => 'camsi', 'CSS0005996' => 'camsi', 'CSS0006590' => 'camsi', 'CSS0009673' => 'camsi', 'CSS0010201' => 'camsi', 'CSS0010549' => 'camsi', 'CSS0011364' => 'camsi', 'CSS0014473' => 'camsi', 'CSS0014961' => 'camsi', 'CSS0020191' => 'camsi', 'CSS0021165' => 'camsi', 'CSS0022306' => 'camsi', 'CSS0030591' => 'camsi', 'CSS0030696' => 'camsi', 'CSS0032653' => 'camsi', 'CSS0037487' => 'camsi', 'CSS0041102' => 'camsi', 'CSS0041261' => 'camsi', 'CSS0046246' => 'camsi', 'CSS0049256' => 'camsi', 'DCAR_004075' => 'dca', 'DCAR_011538' => 'dca', 'DCAR_019553' => 'dca', 'DCAR_020952' => 'dca', 'DCAR_021739' => 'dca', 'DCAR_027407' => 'dca', 'DCAR_027913' => 'dca', 'DCAR_028066' => 'dca', 'Dinv05899' => 'din', 'Dinv07563' => 'din', 'Dinv08010' => 'din', 'Dinv14125' => 'din', 'Dinv20172' => 'din', 'Dinv30743' => 'din', 'Dinv31229' => 'din', 'Dinv34162' => 'din', 'Dinv36028' => 'din', 'Dinv39368' => 'din', 'Dinv40565' => 'din', 'Dinv41706' => 'din', 'Duzib052G0089' => 'dzi', 'Duzib116G0641' => 'dzi', 'Duzib132G0069' => 'dzi', 'Duzib132G1219' => 'dzi', 'Duzib147G0278' => 'dzi', 'Duzib160G0480' => 'dzi', 'Duzib170G0661' => 'dzi', 'Duzib177G0591' => 'dzi', 'Duzib187G1353' => 'dzi', 'Duzib192G0858' => 'dzi', 'Duzib192G0883' => 'dzi', 'Duzib213G0506' => 'dzi', 'Duzib235G0289' => 'dzi', 'Duzib251G0422' => 'dzi', 'ECA232G3898' => 'eca', 'ECA233G5950' => 'eca', 'ECA234G1699' => 'eca', 'ECA234G2421' => 'eca', 'ECA236G0426' => 'eca', 'ECA236G4331' => 'eca', 'ECA248G2573' => 'eca', 'EL10Ac1g00077' => 'bvu', 'EL10Ac1g01746' => 'bvu', 'EL10Ac2g03464' => 'bvu', 'EL10Ac4g08176' => 'bvu', 'EL10Ac7g17521' => 'bvu', 'EL10Ac8g20386' => 'bvu', 'EL10Ac9g21343' => 'bvu', 'EL10Ac9g22688' => 'bvu', 'Eucgr.B03434' => 'egr', 'Eucgr.D00618' => 'egr', 'Eucgr.E02395' => 'egr', 'Eucgr.F01129' => 'egr', 'Eucgr.F02622' => 'egr', 'Eucgr.F04207' => 'egr', 'FAN01G0570' => 'fan', 'FAN03G3351' => 'fan', 'FAN06G3702' => 'fan', 'FAN07G2149' => 'fan', 'FAN10G3758' => 'fan', 'FAN11G1170' => 'fan', 'FAN11G2050' => 'fan', 'FAN11G2724' => 'fan', 'FAN12G1700' => 'fan', 'FAN12G2028' => 'fan', 'FAN15G1160' => 'fan', 'FAN15G3063' => 'fan', 'FAN16G2540' => 'fan', 'FAN16G3077' => 'fan', 'FAN16G3624' => 'fan', 'FAN17G0221' => 'fan', 'FAN20G2492' => 'fan', 'FAN20G2905' => 'fan', 'FAN21G0548' => 'fan', 'FAN21G1300' => 'fan', 'FAN22G0077' => 'fan', 'FAN22G1315' => 'fan', 'FAN24G1280' => 'fan', 'FAN24G1445' => 'fan', 'FAN24G3527' => 'fan', 'FAN25G0464' => 'fan', 'FAN25G2885' => 'fan', 'FAN25G3270' => 'fan', 'FAN27G1101' => 'fan', 'FAN27G2846' => 'fan', 'FAN27G3524' => 'fan', 'FvH4_2g11770' => 'fve', 'FvH4_2g15630' => 'fve', 'FvH4_3g05570' => 'fve', 'FvH4_3g09110' => 'fve', 'FvH4_3g19940' => 'fve', 'FvH4_4g04821' => 'fve', 'FvH4_4g31480' => 'fve', 'FvH4_7g01740' => 'fve', 'Glyma.05G130400' => 'gma', 'Glyma.05G156400' => 'gma', 'Glyma.07G197000' => 'gma', 'Glyma.08G085151' => 'gma', 'Glyma.08G114500' => 'gma', 'Glyma.08G300400' => 'gma', 'Glyma.10G215800' => 'gma', 'Glyma.12G224400' => 'gma', 'Glyma.13G179300' => 'gma', 'Glyma.13G218151' => 'gma', 'Glyma.13G238800' => 'gma', 'Glyma.13G276900' => 'gma', 'Glyma.14G078200' => 'gma', 'Glyma.15G074500' => 'gma', 'Glyma.15G094100' => 'gma', 'Glyma.17G247200' => 'gma', 'Glyma.18G120100' => 'gma', 'Glyma.20G176000' => 'gma', 'Gohir.A01G063600' => 'ghi', 'Gohir.A01G170301' => 'ghi', 'Gohir.A02G060500' => 'ghi', 'Gohir.A05G133850' => 'ghi', 'Gohir.A05G161400' => 'ghi', 'Gohir.A06G012900' => 'ghi', 'Gohir.A06G035901' => 'ghi', 'Gohir.A06G127100' => 'ghi', 'Gohir.A06G210500' => 'ghi', 'Gohir.A08G008650' => 'ghi', 'Gohir.A09G072700' => 'ghi', 'Gohir.A09G088301' => 'ghi', 'Gohir.A10G040600' => 'ghi', 'Gohir.A12G036300' => 'ghi', 'Gohir.A12G143350' => 'ghi', 'Gohir.A12G165500' => 'ghi', 'Gohir.A13G145700' => 'ghi', 'Gohir.D01G050000' => 'ghi', 'Gohir.D01G051366' => 'ghi', 'Gohir.D01G161350' => 'ghi', 'Gohir.D02G065900' => 'ghi', 'Gohir.D05G164200' => 'ghi', 'Gohir.D05G355500' => 'ghi', 'Gohir.D06G010400' => 'ghi', 'Gohir.D06G111250' => 'ghi', 'Gohir.D06G132000' => 'ghi', 'Gohir.D06G210500' => 'ghi', 'Gohir.D07G165675' => 'ghi', 'Gohir.D08G062240' => 'ghi', 'Gohir.D08G086101' => 'ghi', 'Gohir.D08G138060' => 'ghi', 'Gohir.D09G072300' => 'ghi', 'Gohir.D10G041400' => 'ghi', 'Gohir.D11G191020' => 'ghi', 'Gohir.D11G212066' => 'ghi', 'Gohir.D12G036300' => 'ghi', 'Gohir.D12G168600' => 'ghi', 'Gohir.D13G150600' => 'ghi', 'Gorai.001G057300' => 'gra', 'Gorai.002G069900' => 'gra', 'Gorai.002G200000' => 'gra', 'Gorai.003G067600' => 'gra', 'Gorai.005G074800' => 'gra', 'Gorai.006G087300' => 'gra', 'Gorai.008G037500' => 'gra', 'Gorai.008G181400' => 'gra', 'Gorai.009G169400' => 'gra', 'Gorai.009G387900' => 'gra', 'Gorai.010G013300' => 'gra', 'Gorai.010G153800' => 'gra', 'Gorai.010G255800' => 'gra', 'Gorai.011G043700' => 'gra', 'Gorai.011G198900' => 'gra', 'Gorai.013G168400' => 'gra', 'GSVIVG01005212001' => 'vvi', 'GSVIVG01006163001' => 'vvi', 'GSVIVG01009625001' => 'vvi', 'GSVIVG01014338001' => 'vvi', 'GSVIVG01020005001' => 'vvi', 'GSVIVG01021450001' => 'vvi', 'GSVIVG01023975001' => 'vvi', 'GSVIVG01034490001' => 'vvi', 'HanXRQChr04g0112071' => 'han', 'HanXRQChr05g0131151' => 'han', 'HanXRQChr09g0262371' => 'han', 'HanXRQChr09g0268401' => 'han', 'HanXRQChr10g0279241' => 'han', 'HanXRQChr10g0297961' => 'han', 'HanXRQChr11g0326231' => 'han', 'HanXRQChr11g0328471' => 'han', 'HanXRQChr16g0507941' => 'han', 'HanXRQChr17g0560211' => 'han', 'Haze_02108' => 'cav', 'Haze_02428' => 'cav', 'Haze_05593' => 'cav', 'Haze_06448' => 'cav', 'Haze_09427' => 'cav', 'Haze_12022' => 'cav', 'Haze_17612' => 'cav', 'Haze_17928' => 'cav', 'Hma1.2p1_0032F.1_g019250' => 'hma', 'Hma1.2p1_0163F.1_g072690' => 'hma', 'Hma1.2p1_0265F.1_g106710' => 'hma', 'Hma1.2p1_0286F.1_g113970' => 'hma', 'Hma1.2p1_0363F.1_g136640' => 'hma', 'Hma1.2p1_0584F.1_g183470' => 'hma', 'Hma1.2p1_0885F.1_g232570' => 'hma', 'HPP92_006022' => 'vpl', 'HPP92_007320' => 'vpl', 'HPP92_011521' => 'vpl', 'HPP92_019387' => 'vpl', 'HPP92_024038' => 'vpl', 'Hund05891' => 'sun', 'Hund06450' => 'sun', 'Hund12053' => 'sun', 'Hund16800' => 'sun', 'Hund21222' => 'sun', 'Hund22896' => 'sun', 'Hund23746' => 'sun', 'Hund27083' => 'sun', 'Lalb_Chr02g0141831' => 'lal', 'Lalb_Chr02g0141841' => 'lal', 'Lalb_Chr05g0220411' => 'lal', 'Lalb_Chr06g0162081' => 'lal', 'Lalb_Chr09g0327651' => 'lal', 'Lalb_Chr13g0295051' => 'lal', 'Lalb_Chr15g0086801' => 'lal', 'Lalb_Chr16g0383781' => 'lal', 'Lalb_Chr16g0383791' => 'lal', 'Lalb_Chr18g0055441' => 'lal', 'Lalb_Chr18g0059611' => 'lal', 'Lalb_Chr20g0109661' => 'lal', 'Lalb_Chr20g0109831' => 'lal', 'Lalb_Chr20g0121871' => 'lal', 'Lalb_Chr22g0355361' => 'lal', 'Lalb_Chr25g0286371' => 'lal', 'Lj1A1187G43' => 'lonja', 'Lj1A1205T50' => 'lonja', 'Lj1A800G33' => 'lonja', 'Lj1C1187T7' => 'lonja', 'Lj1C843T11' => 'lonja', 'Lj1g0010940' => 'lja', 'Lj2A288T69' => 'lonja', 'Lj3g0024276' => 'lja', 'Lj4A47T76' => 'lonja', 'Lj4g0005805' => 'lja', 'Lj4g0006097' => 'lja', 'Lj4g0008528' => 'lja', 'Lj4g0024907' => 'lja', 'Lj5g0012472' => 'lja', 'Lj5g0018648' => 'lja', 'Lj6C789G1' => 'lonja', 'Lj6g0004000' => 'lja', 'Lj7A292G67' => 'lonja', 'Lj7A292T64' => 'lonja', 'Lj9A400T58' => 'lonja', 'Lsat_1_v5_gn_1_126181' => 'lsa', 'Lsat_1_v5_gn_4_123041' => 'lsa', 'Lsat_1_v5_gn_4_133620' => 'lsa', 'Lsat_1_v5_gn_4_53221' => 'lsa', 'Lsat_1_v5_gn_4_71961' => 'lsa', 'Lsat_1_v5_gn_7_105241' => 'lsa', 'Lsat_1_v5_gn_7_21361' => 'lsa', 'Lsat_1_v5_gn_7_28860' => 'lsa', 'Lsat_1_v5_gn_7_31260' => 'lsa', 'Lsat_1_v5_gn_8_52801' => 'lsa', 'Manes.02G191400' => 'mes', 'Manes.03G110100' => 'mes', 'Manes.04G071100' => 'mes', 'Manes.05G100500' => 'mes', 'Manes.05G164700' => 'mes', 'Manes.15G087000' => 'mes', 'Manes.15G121500' => 'mes', 'Manes.16G028300' => 'mes', 'Manes.17G046100' => 'mes', 'Manes.17G069800' => 'mes', 'Manes.18G100500' => 'mes', 'Mapoly0002s0109' => 'mpo', 'Mapoly0024s0007' => 'mpo', 'Mapoly0089s0032' => 'mpo', 'MBI04_g42241_MAGBIO' => 'mbi', 'MBI05_g11988_MAGBIO' => 'mbi', 'MBI05_g35452_MAGBIO' => 'mbi', 'MBI07_g30179_MAGBIO' => 'mbi', 'MBI07_g35859_MAGBIO' => 'mbi', 'MBI07_g35860_MAGBIO' => 'mbi', 'MBI07_g37166_MAGBIO' => 'mbi', 'MBI08_g18172_MAGBIO' => 'mbi', 'MBI09_g08441_MAGBIO' => 'mbi', 'MBI13_g01676_MAGBIO' => 'mbi', 'MBI14_g42955_MAGBIO' => 'mbi', 'MBI16_g13161_MAGBIO' => 'mbi', 'MBI17_g27204_MAGBIO' => 'mbi', 'MBI19_g21595_MAGBIO' => 'mbi', 'MD00G1148400' => 'mdo', 'MD02G1301200' => 'mdo', 'MD03G1227800' => 'mdo', 'MD05G1041100' => 'mdo', 'MD05G1124800' => 'mdo', 'MD05G1284000' => 'mdo', 'MD05G1338800' => 'mdo', 'MD05G1338900' => 'mdo', 'MD07G1022800' => 'mdo', 'MD10G1047500' => 'mdo', 'MD10G1127500' => 'mdo', 'MD10G1262300' => 'mdo', 'MD10G1293800' => 'mdo', 'MD16G1074300' => 'mdo', 'Medtr1g021670' => 'mtr', 'Medtr1g096320' => 'mtr', 'Medtr2g013690' => 'mtr', 'Medtr2g019450' => 'mtr', 'Medtr2g085170' => 'mtr', 'Medtr4g088785' => 'mtr', 'Medtr8g055930' => 'mtr', 'Medtr8g085850' => 'mtr', 'MELO3C002605.2' => 'cme', 'MELO3C003891.2' => 'cme', 'MELO3C004012.2' => 'cme', 'MELO3C007134.2' => 'cme', 'MELO3C008118.2' => 'cme', 'MELO3C016700.2' => 'cme', 'MELO3C024127.2' => 'cme', 'MELO3C033361.2' => 'cme', 'MELO3C033362.2' => 'cme', 'Migut.C00430' => 'egut', 'Migut.C01246' => 'egut', 'Migut.E00101' => 'egut', 'Migut.H01486' => 'egut', 'Migut.H01939' => 'egut', 'Migut.K00360' => 'egut', 'Migut.M00910' => 'egut', 'Migut.M01139' => 'egut', 'Migut.N02677' => 'egut', 'MSTRG.13252' => 'ama', 'MSTRG.14701' => 'ama', 'MSTRG.1521' => 'ama', 'MSTRG.15884' => 'ama', 'MSTRG.16242' => 'ama', 'MSTRG.22285' => 'ama', 'MSTRG.22444' => 'ama', 'MSTRG.2349' => 'ama', 'MSTRG.26308' => 'ama', 'MSTRG.28296' => 'ama', 'MSTRG.9895' => 'ama', 'Nitab4.5_0000110g0060' => 'nta', 'Nitab4.5_0000420g0130' => 'nta', 'Nitab4.5_0000422g0030' => 'nta', 'Nitab4.5_0000560g0180' => 'nta', 'Nitab4.5_0000703g0100' => 'nta', 'Nitab4.5_0000786g0200' => 'nta', 'Nitab4.5_0001336g0020' => 'nta', 'Nitab4.5_0001796g0030' => 'nta', 'Nitab4.5_0003348g0060' => 'nta', 'Nitab4.5_0003698g0040' => 'nta', 'Nitab4.5_0003942g0090' => 'nta', 'Nitab4.5_0004775g0070' => 'nta', 'Nitab4.5_0004864g0030' => 'nta', 'Nitab4.5_0005615g0020' => 'nta', 'Nitab4.5_0009288g0030' => 'nta', 'Nitab4.5_0009341g0010' => 'nta', 'Nitab4.5_0009535g0010' => 'nta', 'Nn1g03995' => 'nnu', 'Nn1g04100' => 'nnu', 'Nn1g06530' => 'nnu', 'Nn3g16404' => 'nnu', 'Nn3g17212' => 'nnu', 'Nn3g20776' => 'nnu', 'Nn3g21923' => 'nnu', 'Nn5g27737' => 'nnu', 'Nn5g29461' => 'nnu', 'Nn7g38355' => 'nnu', 'Nn8g39873' => 'nnu', 'Oeu000548.2' => 'oeu', 'Oeu004672.1' => 'oeu', 'Oeu015605.2' => 'oeu', 'Oeu016092.1' => 'oeu', 'Oeu017879.3' => 'oeu', 'Oeu024910.1' => 'oeu', 'Oeu028965.1' => 'oeu', 'Oeu031269.1' => 'oeu', 'Oeu031270.1' => 'oeu', 'Oeu032535.1' => 'oeu', 'Oeu034151.1' => 'oeu', 'Oeu034152.1' => 'oeu', 'Oeu034588.2' => 'oeu', 'Oeu050846.1' => 'oeu', 'Oeu050849.2' => 'oeu', 'Oeu051063.2' => 'oeu', 'Oeu052368.1' => 'oeu', 'Oeu052370.1' => 'oeu', 'Os01g0210400' => 'osa', 'Os01g0304300' => 'osa', 'Os01g0749100' => 'osa', 'Os02g0745800' => 'osa', 'Os03g0769050' => 'osa', 'Os05g0531500' => 'osa', 'Os06g0724300' => 'osa', 'Os11g0198100' => 'osa', 'Peaxi162Scf00069g01425' => 'pax', 'Peaxi162Scf00280g00811' => 'pax', 'Peaxi162Scf00310g00615' => 'pax', 'Peaxi162Scf00362g00542' => 'pax', 'Peaxi162Scf00461g00310' => 'pax', 'Peaxi162Scf00530g00118' => 'pax', 'Peaxi162Scf00541g00057' => 'pax', 'Peaxi162Scf00661g00017' => 'pax', 'Peaxi162Scf00926g00027' => 'pax', 'Peaxi162Scf01064g00263' => 'pax', 'Peaxi162Scf01211g00135' => 'pax', 'PGR004G2336' => 'pgr', 'PGR042G0327' => 'pgr', 'PGR042G1957' => 'pgr', 'PGR042G2003' => 'pgr', 'PGR042G3929' => 'pgr', 'PGR083G1137' => 'pgr', 'PGR083G1364' => 'pgr', 'PGSC0003DMG400003381' => 'stu', 'PGSC0003DMG400003417' => 'stu', 'PGSC0003DMG400008981' => 'stu', 'PGSC0003DMG400012417' => 'stu', 'PGSC0003DMG400012823' => 'stu', 'PGSC0003DMG400016885' => 'stu', 'PGSC0003DMG400022812' => 'stu', 'PGSC0003DMG400029726' => 'stu', 'PGSC0003DMG401009243' => 'stu', 'PGSC0003DMG401031505' => 'stu', 'PGSC0003DMG402031505' => 'stu', 'Phvul.001G017600' => 'pvu', 'Phvul.002G193500' => 'pvu', 'Phvul.002G228900' => 'pvu', 'Phvul.002G236800' => 'pvu', 'Phvul.003G049500' => 'pvu', 'Phvul.005G072000' => 'pvu', 'Phvul.006G164800' => 'pvu', 'Phvul.006G185100' => 'pvu', 'Phvul.007G090000' => 'pvu', 'Potri.001G399800' => 'ptr', 'Potri.002G149900' => 'ptr', 'Potri.004G044100' => 'ptr', 'Potri.004G177600' => 'ptr', 'Potri.009G138000' => 'ptr', 'Potri.010G094000' => 'ptr', 'Potri.011G053000' => 'ptr', 'Potri.011G119300' => 'ptr', 'Potri.013G113700' => 'ptr', 'Potri.018G107800' => 'ptr', 'Potri.019G084100' => 'ptr', 'Pp3c14_23720' => 'ppa', 'Pp3c16_6340' => 'ppa', 'Pp3c23_13420' => 'ppa', 'Pp3c24_2740' => 'ppa', 'Pp3c25_860' => 'ppa', 'Pp3c8_21750' => 'ppa', 'Prupe.1G273000' => 'ppe', 'Prupe.1G273700' => 'ppe', 'Prupe.1G274100' => 'ppe', 'Prupe.2G023300' => 'ppe', 'Prupe.4G048000' => 'ppe', 'Prupe.4G080400' => 'ppe', 'Prupe.4G181200' => 'ppe', 'Prupe.8G056900' => 'ppe', 'Prupe.8G168700' => 'ppe', 'Psat1g189080' => 'psa', 'Psat1g204760' => 'psa', 'Psat4g175560' => 'psa', 'Psat4g177720' => 'psa', 'Psat5g244240' => 'psa', 'Psat6g010720' => 'psa', 'Psat6g187200' => 'psa', 'Psat7g072040' => 'psa', 'PSO017G3501' => 'pso', 'PSO063G2148' => 'pso', 'PSO063G5608' => 'pso', 'PSO210G6392' => 'pso', 'PSO541G2319' => 'pso', 'PSO541G2836' => 'pso', 'PSO541G4012' => 'pso', 'PSO541G6253' => 'pso', 'PSO675G0580' => 'pso', 'PSO675G0856' => 'pso', 'PSO675G5635' => 'pso', 'PSO675G9157' => 'pso', 'PSO832G1660' => 'pso', 'PSO832G1969' => 'pso', 'QL02p007186' => 'qlo', 'QL02p033904' => 'qlo', 'QL03p064391' => 'qlo', 'QL05p040593' => 'qlo', 'QL05p058242' => 'qlo', 'QL08p021825' => 'qlo', 'QL11p004981' => 'qlo', 'RcHm_v2.0_Chr1g0318301' => 'rch', 'RcHm_v2.0_Chr4g0418501' => 'rch', 'RcHm_v2.0_Chr4g0439971' => 'rch', 'RcHm_v2.0_Chr5g0008541' => 'rch', 'RcHm_v2.0_Chr5g0014101' => 'rch', 'RcHm_v2.0_Chr5g0014131' => 'rch', 'RcHm_v2.0_Chr5g0033621' => 'rch', 'RcHm_v2.0_Chr6g0272041' => 'rch', 'RcHm_v2.0_Chr6g0278831' => 'rch', 'Rhsim02G0130400' => 'rsi', 'Rhsim02G0171100' => 'rsi', 'Rhsim05G0053000' => 'rsi', 'Rhsim05G0053100' => 'rsi', 'Rhsim06G0096500' => 'rsi', 'Rhsim06G0096600' => 'rsi', 'Rhsim06G0199100' => 'rsi', 'Rhsim12G0062300' => 'rsi', 'Rhsim12G0062800' => 'rsi', 'Sabra02G0118600' => 'sbr', 'Sabra04G0027300' => 'sbr', 'Sabra04G0119500' => 'sbr', 'Sabra08G0112500' => 'sbr', 'Sabra11G0036800' => 'sbr', 'Sabra11G0103800' => 'sbr', 'Sabra13G0096300' => 'sbr', 'Sabra16G0262300' => 'sbr', 'Sabra18G0091700' => 'sbr', 'Sabra19G0095400' => 'sbr', 'SalBow6G3080' => 'sbo', 'SalBow7G1157' => 'sbo', 'SalBow7G2123' => 'sbo', 'SalBow7G2285' => 'sbo', 'SalBow7G3537' => 'sbo', 'SalBow8G2947' => 'sbo', 'SalBow8G4463' => 'sbo', 'SalBow8G5466' => 'sbo', 'Sc01g0001750' => 'sci', 'Sc02g0006640' => 'sci', 'Sc02g0006670' => 'sci', 'Sc04g0008220' => 'sci', 'Sc05g0006190' => 'sci', 'Sc08g0002760' => 'sci', 'Sc17g0006170' => 'sci', 'Sc22g0002050' => 'sci', 'Sc23g0001190' => 'sci', 'Sc24g0000980' => 'sci', 'Sed0006245' => 'sed', 'Sed0007543' => 'sed', 'Sed0009411' => 'sed', 'Sed0010765' => 'sed', 'Sed0012944' => 'sed', 'Sed0014682' => 'sed', 'Sed0016174' => 'sed', 'Sed0016796' => 'sed', 'Sed0020317' => 'sed', 'Sed0021467' => 'sed', 'SEGI_01316' => 'sgi', 'SEGI_03374' => 'sgi', 'SEGI_16265' => 'sgi', 'SEGI_18569' => 'sgi', 'SEGI_20351' => 'sgi', 'SEGI_26395' => 'sgi', 'SEGI_29469' => 'sgi', 'SEGI_34771' => 'sgi', 'SEGI_36769' => 'sgi', 'SEGI_37139' => 'sgi', 'SGA_v2.0_scaffold100G29687' => 'sas', 'SGA_v2.0_scaffold118G32472' => 'sas', 'SGA_v2.0_scaffold14G07051' => 'sas', 'SGA_v2.0_scaffold183G39845' => 'sas', 'SGA_v2.0_scaffold1G00174' => 'sas', 'SGA_v2.0_scaffold22G09714' => 'sas', 'SGA_v2.0_scaffold333G48992' => 'sas', 'SGA_v2.0_scaffold46G17491' => 'sas', 'SGA_v2.0_scaffold49G18294' => 'sas', 'SGA_v2.0_scaffold63G21658' => 'sas', 'SHI01741' => 'shi', 'SHI05771' => 'shi', 'SHI18077' => 'shi', 'SHI20525' => 'shi', 'SHI20527' => 'shi', 'SHI20528' => 'shi', 'SMO172G0185' => 'smo', 'SMO198G0020' => 'smo', 'SMO351G0006' => 'smo', 'SMO356G0118' => 'smo', 'SMO358G0296' => 'smo', 'SMO367G0079' => 'smo', 'SMO367G1277' => 'smo', 'Solyc01g014220.3' => 'sly', 'Solyc01g111770.2' => 'sly', 'Solyc02g078180.3' => 'sly', 'Solyc03g006430.3' => 'sly', 'Solyc03g006456.1' => 'sly', 'Solyc03g079860.2' => 'sly', 'Solyc04g079770.3' => 'sly', 'Solyc05g007430.4' => 'sly', 'Solyc07g063150.3' => 'sly', 'Solyc08g016620.3' => 'sly', 'Solyc09g057590.3' => 'sly', 'Solyc09g057600.1' => 'sly', 'Solyc10g009050.3' => 'sly', 'Solyc11g017420.2' => 'sly', 'Sopen01g053810' => 'spe', 'Sopen02g023040' => 'spe', 'Sopen03g002440' => 'spe', 'Sopen04g033350' => 'spe', 'Sopen05g003310' => 'spe', 'Sopen07g004050' => 'spe', 'Sopen07g031340' => 'spe', 'Sopen08g006990' => 'spe', 'Sopen10g004830' => 'spe', 'Sopen11g009370' => 'spe', 'Sp1g24450' => 'spa', 'Sp1g29670' => 'spa', 'Sp1g39600' => 'spa', 'Sp2g11080' => 'spa', 'Sp2g13970' => 'spa', 'Sp4g16130' => 'spa', 'Sp6g13080' => 'spa', 'Sp7g37270' => 'spa', 'TAR371G0065' => 'tar', 'TAR376G0340' => 'tar', 'TAR376G0435' => 'tar', 'TAR381G0002' => 'tar', 'TAR381G1236' => 'tar', 'TAR624G0055' => 'tar', 'TAR624G0324' => 'tar', 'TAR624G0696' => 'tar', 'TAR624G0906' => 'tar', 'TAR625G0107' => 'tar', 'TAR626G0015' => 'tar', 'TAR626G1356' => 'tar', 'TAR627G0888' => 'tar', 'TAR628G0399' => 'tar', 'TAR628G1327' => 'tar', 'TAR629G2831' => 'tar', 'TAR629G2874' => 'tar', 'TAR633G1432' => 'tar', 'TAR633G2771' => 'tar', 'THA.LOC104803394' => 'tha', 'THA.LOC104805153' => 'tha', 'THA.LOC104806784' => 'tha', 'THA.LOC104810473' => 'tha', 'THA.LOC104813100' => 'tha', 'THA.LOC104814215' => 'tha', 'THA.LOC104815554' => 'tha', 'THA.LOC104820544' => 'tha', 'THA.LOC104824754' => 'tha', 'THA.LOC104827717' => 'tha', 'Thecc.02G031400' => 'tca', 'Thecc.02G055900' => 'tca', 'Thecc.02G350800' => 'tca', 'Thecc.06G150900' => 'tca', 'Thecc.06G186600' => 'tca', 'Thecc.07G089600' => 'tca', 'Thecc.08G020400' => 'tca', 'Thecc.08G182100' => 'tca', 'Thhalv10000873m.g' => 'esa', 'Thhalv10004185m.g' => 'esa', 'Thhalv10006981m.g' => 'esa', 'Thhalv10007204m.g' => 'esa', 'Thhalv10011374m.g' => 'esa', 'Thhalv10013482m.g' => 'esa', 'Thhalv10017801m.g' => 'esa', 'Thhalv10024983m.g' => 'esa', 'TPR.G12072' => 'tpr', 'TPR.G15769' => 'tpr', 'TPR.G16504' => 'tpr', 'TPR.G16506' => 'tpr', 'TPR.G24345' => 'tpr', 'TPR.G26666' => 'tpr', 'TPR.G27320' => 'tpr', 'TPR.G31819' => 'tpr', 'TPR.G38879' => 'tpr', 'TPR.G39015' => 'tpr', 'TPR.G8819' => 'tpr', 'TWI09G0924' => 'twi', 'TWI12G0811' => 'twi', 'TWI12G1294' => 'twi', 'TWI31G0150' => 'twi', 'TWI36G1262' => 'twi', 'TWI38G1287' => 'twi', 'TWI38G1633' => 'twi', 'TWI38G1982' => 'twi', 'TWI39G0116' => 'twi', 'TWI60G1011' => 'twi', 'TWI63G0171' => 'twi', 'TWI73G0839' => 'twi', 'TWI79G1511' => 'twi', 'unitig_0.g915' => 'ugi', 'unitig_0.g916' => 'ugi', 'unitig_21.g20219' => 'ugi', 'unitig_21.g20416' => 'ugi', 'unitig_578.g16132' => 'ugi', 'unitig_578.g16718' => 'ugi', 'unitig_62.g23481' => 'ugi', 'unitig_744.g24535' => 'ugi', 'unitig_749.g13525' => 'ugi', 'vmacro01248' => 'vma', 'vmacro02290' => 'vma', 'vmacro10946' => 'vma', 'vmacro11865' => 'vma', 'vmacro12493' => 'vma', 'vmacro17322' => 'vma', 'vmacro21599' => 'vma', 'vmacro23041' => 'vma', 'VMungo0251G0004' => 'vmu', 'VMungo0251G2639' => 'vmu', 'VMungo0251G2967' => 'vmu', 'VMungo0540G0864' => 'vmu', 'VMungo0540G1569' => 'vmu', 'VMungo0647G0317' => 'vmu', 'VMungo0720G1373' => 'vmu', 'VMungo0720G1508' => 'vmu', 'VMungo1080G0485' => 'vmu', 'VMungo1215G3177' => 'vmu', 'Zm00001eb112600' => 'zma', 'Zm00001eb120220' => 'zma', 'Zm00001eb153240' => 'zma', 'Zm00001eb168880' => 'zma', 'Zm00001eb213920' => 'zma', 'Zm00001eb228280' => 'zma', 'Zm00001eb254580' => 'zma', 'Zm00001eb272180' => 'zma', 'Zm00001eb293190' => 'zma', 'Zm00001eb322930' => 'zma', 'Zm00001eb353360' => 'zma', 'Zm00001eb353390' => 'zma', 'Zm00001eb353430' => 'zma', 'Zm00001eb353440' => 'zma', 'Zm00001eb353780' => 'zma' ) $gf_id = 'HOM05D000499' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000499' ) $data_identifier = 'HOM05D000499' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 29, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 12, 'amhyb' => (int) 8, 'aly' => (int) 12, 'aox' => (int) 9, 'arhy' => (int) 26, 'ath' => (int) 8, 'atr' => (int) 7, 'acertr' => (int) 10, 'cqu' => (int) 15, 'bca' => (int) 29, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 11, 'cansat' => (int) 8, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 9, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 8, 'cpa' => (int) 10, 'csa' => (int) 7, 'camsi' => (int) 20, 'dca' => (int) 8, 'din' => (int) 12, 'dzi' => (int) 14, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 6, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 38, 'gra' => (int) 16, 'vvi' => (int) 8, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 5, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 11, 'lja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 11, 'mpo' => (int) 3, 'mbi' => (int) 14, 'mdo' => (int) 14, 'mtr' => (int) 8, 'cme' => (int) 9, 'egut' => (int) 9, 'ama' => (int) 11, 'nta' => (int) 17, 'nnu' => (int) 11, 'oeu' => (int) 18, 'osa' => (int) 8, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 6, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 9, 'rsi' => (int) 9, 'sbr' => (int) 10, 'sbo' => (int) 8, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 10, 'sas' => (int) 10, 'shi' => (int) 6, 'smo' => (int) 7, 'sly' => (int) 14, 'spe' => (int) 10, 'spa' => (int) 8, 'tar' => (int) 19, 'tha' => (int) 10, 'tca' => (int) 8, 'esa' => (int) 8, 'tpr' => (int) 11, 'twi' => (int) 13, 'ugi' => (int) 9, 'vma' => (int) 8, 'vmu' => (int) 10, 'zma' => (int) 15 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb353780' $species_info = array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ) $local_species = 'bol' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000499', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1066', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p29780' => 'bna', 'A02p33180' => 'bna', 'A03p16470' => 'bna', 'A03p66010' => 'bna', 'A04p25970' => 'bna', 'A06p01270' => 'bna', 'A06p46080' => 'bna', 'A07p11400' => 'bna', 'A08p01840' => 'bna', 'A08p08230' => 'bna', 'A08p25740' => 'bna', 'A09p32070' => 'bna', 'A09p37830' => 'bna', 'A09p42840' => 'bna', 'A09p42850' => 'bna', 'Aa31LG10G2060' => 'aar', 'Aa31LG2G7410' => 'aar', 'Aa31LG6G10200' => 'aar', 'Aa31LG6G16680' => 'aar', 'Aa31LG6G8470' => 'aar', 'Aa31LG9G12730' => 'aar', 'Aa31LG9G13680' => 'aar', 'Aa31LG9G14920' => 'aar', 'Aa31LG9G6650' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4977' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5467' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3254' => 'aag', 'Actinidia02578' => 'ach', 'Actinidia07693' => 'ach', 'Actinidia08413' => 'ach', 'Actinidia08414' => 'ach', 'Actinidia15289' => 'ach', 'Actinidia19871' => 'ach', 'Actinidia21475' => 'ach', 'Actinidia22576' => 'ach', 'Actinidia28327' => 'ach', 'Actinidia32491' => 'ach', 'Actinidia39463' => 'ach', 'Actinidia39571' => 'ach', 'Ah.01g013750' => 'amhyb', 'Ah.01g023210' => 'amhyb', 'Ah.04g164850' => 'amhyb', 'Ah.05g178060' => 'amhyb', 'Ah.07g204270' => 'amhyb', 'Ah.07g208480' => 'amhyb', 'Ah.09g237410' => 'amhyb', 'Ah.14g089460' => 'amhyb', 'AL1G41790' => 'aly', 'AL1G49050' => 'aly', 'AL1G53810' => 'aly', 'AL1G61400' => 'aly', 'AL4G18580' => 'aly', 'AL5G12510' => 'aly', 'AL5G12540' => 'aly', 'AL6G43230' => 'aly', 'AL7G10370' => 'aly', 'AL7G19250' => 'aly', 'AL8G12240' => 'aly', 'AL8G18540' => 'aly', 'Aqoxy1G02409' => 'aox', 'Aqoxy2G03993' => 'aox', 'Aqoxy3G03357' => 'aox', 'Aqoxy4G00785' => 'aox', 'Aqoxy5G02598' => 'aox', 'Aqoxy6G00132' => 'aox', 'Aqoxy7G01776' => 'aox', 'Aqoxy7G02316' => 'aox', 'Aqoxy7G03973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.12AFKW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B8730' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27IQR1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3F75VG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3RE0GA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41TCQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.527VTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FIR39' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5W8UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DA38EV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ63HS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H1I32C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HC27T5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4M8AP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7N3CZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9UVDZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LS1NQA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT1D4B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SKC4TM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCFV76' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF9Q1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQWD9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1ZM88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WE07RT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YCK7VH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJE6Q6' => 'arhy', 'AT1G28240' => 'ath', 'AT1G34550' => 'ath', 'AT1G53040' => 'ath', 'AT2G02910' => 'ath', 'AT4G09630' => 'ath', 'AT4G38500' => 'ath', 'AT5G42660' => 'ath', 'AT5G46220' => 'ath', 'ATR0152G026' => 'atr', 'ATR0564G343' => 'atr', 'ATR0706G151' => 'atr', 'ATR0733G207' => 'atr', 'ATR0751G234' => 'atr', 'ATR0807G048' => 'atr', 'ATR1091G084' => 'atr', 'Atru.chr10.1229' => 'acertr', 'Atru.chr10.1230' => 'acertr', 'Atru.chr10.1874' => 'acertr', 'Atru.chr11.1808' => 'acertr', 'Atru.chr13.1795' => 'acertr', 'Atru.chr13.570' => 'acertr', 'Atru.chr2.2608' => 'acertr', 'Atru.chr2.2609' => 'acertr', 'Atru.chr5.3428' => 'acertr', 'Atru.chr8.1171' => 'acertr', 'AUR62004651' => 'cqu', 'AUR62008675' => 'cqu', 'AUR62010014' => 'cqu', 'AUR62013004' => 'cqu', 'AUR62014825' => 'cqu', 'AUR62015015' => 'cqu', 'AUR62015151' => 'cqu', 'AUR62017020' => 'cqu', 'AUR62019422' => 'cqu', 'AUR62023570' => 'cqu', 'AUR62025571' => 'cqu', 'AUR62029098' => 'cqu', 'AUR62033863' => 'cqu', 'AUR62034296' => 'cqu', 'AUR62040075' => 'cqu', 'BcaB02g07334' => 'bca', 'BcaB02g10575' => 'bca', 'BcaB03g12119' => 'bca', 'BcaB03g12120' => 'bca', 'BcaB03g13945' => 'bca', 'BcaB04g17123' => 'bca', 'BcaB04g17867' => 'bca', 'BcaB04g19839' => 'bca', 'BcaB07g30317' => 'bca', 'BcaB07g32432' => 'bca', 'BcaB07g33362' => 'bca', 'BcaB08g36611' => 'bca', 'BcaC01g00028' => 'bca', 'BcaC01g01356' => 'bca', 'BcaC01g02034' => 'bca', 'BcaC01g06051' => 'bca', 'BcaC03g16839' => 'bca', 'BcaC03g17176' => 'bca', 'BcaC05g26829' => 'bca', 'BcaC06g31490' => 'bca', 'BcaC06g35344' => 'bca', 'BcaC06g36570' => 'bca', 'BcaC07g37537' => 'bca', 'BcaC08g43491' => 'bca', 'BcaC08g43773' => 'bca', 'BcaNung00234' => 'bca', 'BcaNung01982' => 'bca', 'BcaNung03707' => 'bca', 'BcaNung06454' => 'bca', 'BolC2t10762H' => 'bol', 'BolC2t11191H' => 'bol', 'BolC3t14322H' => 'bol', 'BolC3t19747H' => 'bol', 'BolC3t21425H' => 'bol', 'BolC4t27800H' => 'bol', 'BolC5t31423H' => 'bol', 'BolC6t35951H' => 'bol', 'BolC6t36282H' => 'bol', 'BolC7t40678H' => 'bol', 'BolC7t40679H' => 'bol', 'BolC7t42222H' => 'bol', 'BolC7t43492H' => 'bol', 'BolC7t46785H' => 'bol', 'BolC8t47853H' => 'bol', 'BolC9t56805H' => 'bol', 'BraA02t08000Z' => 'bra', 'BraA02t08341Z' => 'bra', 'BraA03t10936Z' => 'bra', 'BraA03t15657Z' => 'bra', 'BraA04t18100Z' => 'bra', 'BraA05t20523Z' => 'bra', 'BraA06t23353Z' => 'bra', 'BraA06t27473Z' => 'bra', 'BraA06t27769Z' => 'bra', 'BraA07t28928Z' => 'bra', 'BraA08t32236Z' => 'bra', 'BraA08t32841Z' => 'bra', 'BraA08t34524Z' => 'bra', 'BraA09t38742Z' => 'bra', 'BraA09t39295Z' => 'bra', 'C02p47180' => 'bna', 'C02p50990' => 'bna', 'C03p19360' => 'bna', 'C03p74950' => 'bna', 'C03p91000' => 'bna', 'C04p63260' => 'bna', 'C05p27050' => 'bna', 'C06p08750' => 'bna', 'C06p11490' => 'bna', 'C07p02820' => 'bna', 'C07p17180' => 'bna', 'C07p29440' => 'bna', 'C07p63730' => 'bna', 'C09p39260' => 'bna', 'CAN.G1164.34' => 'can', 'CAN.G1164.39' => 'can', 'CAN.G1530.3' => 'can', 'CAN.G162.61' => 'can', 'CAN.G176.6' => 'can', 'CAN.G289.49' => 'can', 'CAN.G370.21' => 'can', 'CAN.G370.22' => 'can', 'CAN.G371.117' => 'can', 'CAN.G58.37' => 'can', 'CAN.G588.98' => 'can', 'CANSAT21G2266' => 'cansat', 'CANSAT25G2799' => 'cansat', 'CANSAT35G0862' => 'cansat', 'CANSAT35G1704' => 'cansat', 'CANSAT35G1760' => 'cansat', 'CANSAT56G3971' => 'cansat', 'CANSAT56G4116' => 'cansat', 'CANSAT80G1259' => 'cansat', 'CARHR027730' => 'chi', 'CARHR033880' => 'chi', 'CARHR043270' => 'chi', 'CARHR145330' => 'chi', 'CARHR145340' => 'chi', 'CARHR175570' => 'chi', 'CARHR181570' => 'chi', 'CARHR258470' => 'chi', 'CARHR260490' => 'chi', 'CARHR294220' => 'chi', 'Carub.0001s2668' => 'cru', 'Carub.0001s3257' => 'cru', 'Carub.0001s4220' => 'cru', 'Carub.0005s0179' => 'cru', 'Carub.0006s2807' => 'cru', 'Carub.0007s0039' => 'cru', 'Carub.0008s0169' => 'cru', 'Carub.0008s0636' => 'cru', 'Ca_00338_v3' => 'car', 'Ca_00542_v3' => 'car', 'Ca_01844_v3' => 'car', 'Ca_10611_v3' => 'car', 'Ca_13326_v3' => 'car', 'Ca_17944_v3' => 'car', 'Ca_18546_v3' => 'car', 'Ca_24219_v3' => 'car', 'Ca_29972_v3' => 'car', 'CBR_g3681' => 'cbr', 'CBR_g40021' => 'cbr', 'Cc01_g08140' => 'ccan', 'Cc02_g13410' => 'ccan', 'Cc02_g37480' => 'ccan', 'Cc05_g12030' => 'ccan', 'Cc09_g03370' => 'ccan', 'Cc09_g10300' => 'ccan', 'Cc10_g03530' => 'ccan', 'Cc10_g11380' => 'ccan', 'CDE01G0176' => 'cde', 'CDE02G0675' => 'cde', 'CDE02G0942' => 'cde', 'CDE02G1153' => 'cde', 'CDE02G4177' => 'cde', 'CDE04G2117' => 'cde', 'CDE04G2736' => 'cde', 'CDE08G1161' => 'cde', 'CDE09G1238' => 'cde', 'Cfa000467' => 'cfa', 'Cfa000947' => 'cfa', 'Cfa004969' => 'cfa', 'Cfa005284' => 'cfa', 'Cfa008993' => 'cfa', 'Cfa018187' => 'cfa', 'Cfa018454' => 'cfa', 'Cfa020585' => 'cfa', 'Ciclev10000424m.g' => 'ccl', 'Ciclev10003605m.g' => 'ccl', 'Ciclev10007828m.g' => 'ccl', 'Ciclev10014620m.g' => 'ccl', 'Ciclev10015169m.g' => 'ccl', 'Ciclev10018291m.g' => 'ccl', 'Ciclev10028256m.g' => 'ccl', 'Ciclev10033822m.g' => 'ccl', 'CiPaw.05G060300' => 'cil', 'CiPaw.05G085000' => 'cil', 'CiPaw.06G083700' => 'cil', 'CiPaw.06G120300' => 'cil', 'CiPaw.09G060500' => 'cil', 'CiPaw.09G123800' => 'cil', 'CiPaw.11G169700' => 'cil', 'CiPaw.12G118300' => 'cil', 'CiPaw.15G071000' => 'cil', 'CiPaw.15G081900' => 'cil', 'ClCG01G024610' => 'cla', 'ClCG03G006070' => 'cla', 'ClCG05G019250' => 'cla', 'ClCG09G009500' => 'cla', 'ClCG11G008200' => 'cla', 'ClCG11G018080' => 'cla', 'COL.COLO4_17373' => 'col', 'COL.COLO4_22994' => 'col', 'COL.COLO4_26389' => 'col', 'COL.COLO4_27170' => 'col', 'COL.COLO4_31074' => 'col', 'COL.COLO4_31465' => 'col', 'COL.COLO4_36438' => 'col', 'COL.COLO4_36439' => 'col', 'Cpa.g.c38781' => 'cpa', 'Cpa.g.sc128.12' => 'cpa', 'Cpa.g.sc166.7' => 'cpa', 'Cpa.g.sc166.8' => 'cpa', 'Cpa.g.sc20.111' => 'cpa', 'Cpa.g.sc27.31' => 'cpa', 'Cpa.g.sc64.36' => 'cpa', 'Cpa.g.sc64.37' => 'cpa', 'Cpa.g.sc66.49' => 'cpa', 'Cpa.g.sc80.64' => 'cpa', 'CsaV3_1G012320' => 'csa', 'CsaV3_2G008480' => 'csa', 'CsaV3_2G033450' => 'csa', 'CsaV3_3G044830' => 'csa', 'CsaV3_4G033710' => 'csa', 'CsaV3_6G051730' => 'csa', 'CsaV3_7G025350' => 'csa', 'CSS0001067' => 'camsi', 'CSS0005996' => 'camsi', 'CSS0006590' => 'camsi', 'CSS0009673' => 'camsi', 'CSS0010201' => 'camsi', 'CSS0010549' => 'camsi', 'CSS0011364' => 'camsi', 'CSS0014473' => 'camsi', 'CSS0014961' => 'camsi', 'CSS0020191' => 'camsi', 'CSS0021165' => 'camsi', 'CSS0022306' => 'camsi', 'CSS0030591' => 'camsi', 'CSS0030696' => 'camsi', 'CSS0032653' => 'camsi', 'CSS0037487' => 'camsi', 'CSS0041102' => 'camsi', 'CSS0041261' => 'camsi', 'CSS0046246' => 'camsi', 'CSS0049256' => 'camsi', 'DCAR_004075' => 'dca', 'DCAR_011538' => 'dca', 'DCAR_019553' => 'dca', 'DCAR_020952' => 'dca', 'DCAR_021739' => 'dca', 'DCAR_027407' => 'dca', 'DCAR_027913' => 'dca', 'DCAR_028066' => 'dca', 'Dinv05899' => 'din', 'Dinv07563' => 'din', 'Dinv08010' => 'din', 'Dinv14125' => 'din', 'Dinv20172' => 'din', 'Dinv30743' => 'din', 'Dinv31229' => 'din', 'Dinv34162' => 'din', 'Dinv36028' => 'din', 'Dinv39368' => 'din', 'Dinv40565' => 'din', 'Dinv41706' => 'din', 'Duzib052G0089' => 'dzi', 'Duzib116G0641' => 'dzi', 'Duzib132G0069' => 'dzi', 'Duzib132G1219' => 'dzi', 'Duzib147G0278' => 'dzi', 'Duzib160G0480' => 'dzi', 'Duzib170G0661' => 'dzi', 'Duzib177G0591' => 'dzi', 'Duzib187G1353' => 'dzi', 'Duzib192G0858' => 'dzi', 'Duzib192G0883' => 'dzi', 'Duzib213G0506' => 'dzi', 'Duzib235G0289' => 'dzi', 'Duzib251G0422' => 'dzi', 'ECA232G3898' => 'eca', 'ECA233G5950' => 'eca', 'ECA234G1699' => 'eca', 'ECA234G2421' => 'eca', 'ECA236G0426' => 'eca', 'ECA236G4331' => 'eca', 'ECA248G2573' => 'eca', 'EL10Ac1g00077' => 'bvu', 'EL10Ac1g01746' => 'bvu', 'EL10Ac2g03464' => 'bvu', 'EL10Ac4g08176' => 'bvu', 'EL10Ac7g17521' => 'bvu', 'EL10Ac8g20386' => 'bvu', 'EL10Ac9g21343' => 'bvu', 'EL10Ac9g22688' => 'bvu', 'Eucgr.B03434' => 'egr', 'Eucgr.D00618' => 'egr', 'Eucgr.E02395' => 'egr', 'Eucgr.F01129' => 'egr', 'Eucgr.F02622' => 'egr', 'Eucgr.F04207' => 'egr', 'FAN01G0570' => 'fan', 'FAN03G3351' => 'fan', 'FAN06G3702' => 'fan', 'FAN07G2149' => 'fan', 'FAN10G3758' => 'fan', 'FAN11G1170' => 'fan', 'FAN11G2050' => 'fan', 'FAN11G2724' => 'fan', 'FAN12G1700' => 'fan', 'FAN12G2028' => 'fan', 'FAN15G1160' => 'fan', 'FAN15G3063' => 'fan', 'FAN16G2540' => 'fan', 'FAN16G3077' => 'fan', 'FAN16G3624' => 'fan', 'FAN17G0221' => 'fan', 'FAN20G2492' => 'fan', 'FAN20G2905' => 'fan', 'FAN21G0548' => 'fan', 'FAN21G1300' => 'fan', 'FAN22G0077' => 'fan', 'FAN22G1315' => 'fan', 'FAN24G1280' => 'fan', 'FAN24G1445' => 'fan', 'FAN24G3527' => 'fan', 'FAN25G0464' => 'fan', 'FAN25G2885' => 'fan', 'FAN25G3270' => 'fan', 'FAN27G1101' => 'fan', 'FAN27G2846' => 'fan', 'FAN27G3524' => 'fan', 'FvH4_2g11770' => 'fve', 'FvH4_2g15630' => 'fve', 'FvH4_3g05570' => 'fve', 'FvH4_3g09110' => 'fve', 'FvH4_3g19940' => 'fve', 'FvH4_4g04821' => 'fve', 'FvH4_4g31480' => 'fve', 'FvH4_7g01740' => 'fve', 'Glyma.05G130400' => 'gma', 'Glyma.05G156400' => 'gma', 'Glyma.07G197000' => 'gma', 'Glyma.08G085151' => 'gma', 'Glyma.08G114500' => 'gma', 'Glyma.08G300400' => 'gma', 'Glyma.10G215800' => 'gma', 'Glyma.12G224400' => 'gma', 'Glyma.13G179300' => 'gma', 'Glyma.13G218151' => 'gma', 'Glyma.13G238800' => 'gma', 'Glyma.13G276900' => 'gma', 'Glyma.14G078200' => 'gma', 'Glyma.15G074500' => 'gma', 'Glyma.15G094100' => 'gma', 'Glyma.17G247200' => 'gma', 'Glyma.18G120100' => 'gma', 'Glyma.20G176000' => 'gma', 'Gohir.A01G063600' => 'ghi', 'Gohir.A01G170301' => 'ghi', 'Gohir.A02G060500' => 'ghi', 'Gohir.A05G133850' => 'ghi', 'Gohir.A05G161400' => 'ghi', 'Gohir.A06G012900' => 'ghi', 'Gohir.A06G035901' => 'ghi', 'Gohir.A06G127100' => 'ghi', 'Gohir.A06G210500' => 'ghi', 'Gohir.A08G008650' => 'ghi', 'Gohir.A09G072700' => 'ghi', 'Gohir.A09G088301' => 'ghi', 'Gohir.A10G040600' => 'ghi', 'Gohir.A12G036300' => 'ghi', 'Gohir.A12G143350' => 'ghi', 'Gohir.A12G165500' => 'ghi', 'Gohir.A13G145700' => 'ghi', 'Gohir.D01G050000' => 'ghi', 'Gohir.D01G051366' => 'ghi', 'Gohir.D01G161350' => 'ghi', 'Gohir.D02G065900' => 'ghi', 'Gohir.D05G164200' => 'ghi', 'Gohir.D05G355500' => 'ghi', 'Gohir.D06G010400' => 'ghi', 'Gohir.D06G111250' => 'ghi', 'Gohir.D06G132000' => 'ghi', 'Gohir.D06G210500' => 'ghi', 'Gohir.D07G165675' => 'ghi', 'Gohir.D08G062240' => 'ghi', 'Gohir.D08G086101' => 'ghi', 'Gohir.D08G138060' => 'ghi', 'Gohir.D09G072300' => 'ghi', 'Gohir.D10G041400' => 'ghi', 'Gohir.D11G191020' => 'ghi', 'Gohir.D11G212066' => 'ghi', 'Gohir.D12G036300' => 'ghi', 'Gohir.D12G168600' => 'ghi', 'Gohir.D13G150600' => 'ghi', 'Gorai.001G057300' => 'gra', 'Gorai.002G069900' => 'gra', 'Gorai.002G200000' => 'gra', 'Gorai.003G067600' => 'gra', 'Gorai.005G074800' => 'gra', 'Gorai.006G087300' => 'gra', 'Gorai.008G037500' => 'gra', 'Gorai.008G181400' => 'gra', 'Gorai.009G169400' => 'gra', 'Gorai.009G387900' => 'gra', 'Gorai.010G013300' => 'gra', 'Gorai.010G153800' => 'gra', 'Gorai.010G255800' => 'gra', 'Gorai.011G043700' => 'gra', 'Gorai.011G198900' => 'gra', 'Gorai.013G168400' => 'gra', 'GSVIVG01005212001' => 'vvi', 'GSVIVG01006163001' => 'vvi', 'GSVIVG01009625001' => 'vvi', 'GSVIVG01014338001' => 'vvi', 'GSVIVG01020005001' => 'vvi', 'GSVIVG01021450001' => 'vvi', 'GSVIVG01023975001' => 'vvi', 'GSVIVG01034490001' => 'vvi', 'HanXRQChr04g0112071' => 'han', 'HanXRQChr05g0131151' => 'han', 'HanXRQChr09g0262371' => 'han', 'HanXRQChr09g0268401' => 'han', 'HanXRQChr10g0279241' => 'han', 'HanXRQChr10g0297961' => 'han', 'HanXRQChr11g0326231' => 'han', 'HanXRQChr11g0328471' => 'han', 'HanXRQChr16g0507941' => 'han', 'HanXRQChr17g0560211' => 'han', 'Haze_02108' => 'cav', 'Haze_02428' => 'cav', 'Haze_05593' => 'cav', 'Haze_06448' => 'cav', 'Haze_09427' => 'cav', 'Haze_12022' => 'cav', 'Haze_17612' => 'cav', 'Haze_17928' => 'cav', 'Hma1.2p1_0032F.1_g019250' => 'hma', 'Hma1.2p1_0163F.1_g072690' => 'hma', 'Hma1.2p1_0265F.1_g106710' => 'hma', 'Hma1.2p1_0286F.1_g113970' => 'hma', 'Hma1.2p1_0363F.1_g136640' => 'hma', 'Hma1.2p1_0584F.1_g183470' => 'hma', 'Hma1.2p1_0885F.1_g232570' => 'hma', 'HPP92_006022' => 'vpl', 'HPP92_007320' => 'vpl', 'HPP92_011521' => 'vpl', 'HPP92_019387' => 'vpl', 'HPP92_024038' => 'vpl', 'Hund05891' => 'sun', 'Hund06450' => 'sun', 'Hund12053' => 'sun', 'Hund16800' => 'sun', 'Hund21222' => 'sun', 'Hund22896' => 'sun', 'Hund23746' => 'sun', 'Hund27083' => 'sun', 'Lalb_Chr02g0141831' => 'lal', 'Lalb_Chr02g0141841' => 'lal', 'Lalb_Chr05g0220411' => 'lal', 'Lalb_Chr06g0162081' => 'lal', 'Lalb_Chr09g0327651' => 'lal', 'Lalb_Chr13g0295051' => 'lal', 'Lalb_Chr15g0086801' => 'lal', 'Lalb_Chr16g0383781' => 'lal', 'Lalb_Chr16g0383791' => 'lal', 'Lalb_Chr18g0055441' => 'lal', 'Lalb_Chr18g0059611' => 'lal', 'Lalb_Chr20g0109661' => 'lal', 'Lalb_Chr20g0109831' => 'lal', 'Lalb_Chr20g0121871' => 'lal', 'Lalb_Chr22g0355361' => 'lal', 'Lalb_Chr25g0286371' => 'lal', 'Lj1A1187G43' => 'lonja', 'Lj1A1205T50' => 'lonja', 'Lj1A800G33' => 'lonja', 'Lj1C1187T7' => 'lonja', 'Lj1C843T11' => 'lonja', 'Lj1g0010940' => 'lja', 'Lj2A288T69' => 'lonja', 'Lj3g0024276' => 'lja', 'Lj4A47T76' => 'lonja', 'Lj4g0005805' => 'lja', 'Lj4g0006097' => 'lja', 'Lj4g0008528' => 'lja', 'Lj4g0024907' => 'lja', 'Lj5g0012472' => 'lja', 'Lj5g0018648' => 'lja', 'Lj6C789G1' => 'lonja', 'Lj6g0004000' => 'lja', 'Lj7A292G67' => 'lonja', 'Lj7A292T64' => 'lonja', 'Lj9A400T58' => 'lonja', 'Lsat_1_v5_gn_1_126181' => 'lsa', 'Lsat_1_v5_gn_4_123041' => 'lsa', 'Lsat_1_v5_gn_4_133620' => 'lsa', 'Lsat_1_v5_gn_4_53221' => 'lsa', 'Lsat_1_v5_gn_4_71961' => 'lsa', 'Lsat_1_v5_gn_7_105241' => 'lsa', 'Lsat_1_v5_gn_7_21361' => 'lsa', 'Lsat_1_v5_gn_7_28860' => 'lsa', 'Lsat_1_v5_gn_7_31260' => 'lsa', 'Lsat_1_v5_gn_8_52801' => 'lsa', 'Manes.02G191400' => 'mes', 'Manes.03G110100' => 'mes', 'Manes.04G071100' => 'mes', 'Manes.05G100500' => 'mes', 'Manes.05G164700' => 'mes', 'Manes.15G087000' => 'mes', 'Manes.15G121500' => 'mes', 'Manes.16G028300' => 'mes', 'Manes.17G046100' => 'mes', 'Manes.17G069800' => 'mes', 'Manes.18G100500' => 'mes', 'Mapoly0002s0109' => 'mpo', 'Mapoly0024s0007' => 'mpo', 'Mapoly0089s0032' => 'mpo', 'MBI04_g42241_MAGBIO' => 'mbi', 'MBI05_g11988_MAGBIO' => 'mbi', 'MBI05_g35452_MAGBIO' => 'mbi', 'MBI07_g30179_MAGBIO' => 'mbi', 'MBI07_g35859_MAGBIO' => 'mbi', 'MBI07_g35860_MAGBIO' => 'mbi', 'MBI07_g37166_MAGBIO' => 'mbi', 'MBI08_g18172_MAGBIO' => 'mbi', 'MBI09_g08441_MAGBIO' => 'mbi', 'MBI13_g01676_MAGBIO' => 'mbi', 'MBI14_g42955_MAGBIO' => 'mbi', 'MBI16_g13161_MAGBIO' => 'mbi', 'MBI17_g27204_MAGBIO' => 'mbi', 'MBI19_g21595_MAGBIO' => 'mbi', 'MD00G1148400' => 'mdo', 'MD02G1301200' => 'mdo', 'MD03G1227800' => 'mdo', 'MD05G1041100' => 'mdo', 'MD05G1124800' => 'mdo', 'MD05G1284000' => 'mdo', 'MD05G1338800' => 'mdo', 'MD05G1338900' => 'mdo', 'MD07G1022800' => 'mdo', 'MD10G1047500' => 'mdo', 'MD10G1127500' => 'mdo', 'MD10G1262300' => 'mdo', 'MD10G1293800' => 'mdo', 'MD16G1074300' => 'mdo', 'Medtr1g021670' => 'mtr', 'Medtr1g096320' => 'mtr', 'Medtr2g013690' => 'mtr', 'Medtr2g019450' => 'mtr', 'Medtr2g085170' => 'mtr', 'Medtr4g088785' => 'mtr', 'Medtr8g055930' => 'mtr', 'Medtr8g085850' => 'mtr', 'MELO3C002605.2' => 'cme', 'MELO3C003891.2' => 'cme', 'MELO3C004012.2' => 'cme', 'MELO3C007134.2' => 'cme', 'MELO3C008118.2' => 'cme', 'MELO3C016700.2' => 'cme', 'MELO3C024127.2' => 'cme', 'MELO3C033361.2' => 'cme', 'MELO3C033362.2' => 'cme', 'Migut.C00430' => 'egut', 'Migut.C01246' => 'egut', 'Migut.E00101' => 'egut', 'Migut.H01486' => 'egut', 'Migut.H01939' => 'egut', 'Migut.K00360' => 'egut', 'Migut.M00910' => 'egut', 'Migut.M01139' => 'egut', 'Migut.N02677' => 'egut', 'MSTRG.13252' => 'ama', 'MSTRG.14701' => 'ama', 'MSTRG.1521' => 'ama', 'MSTRG.15884' => 'ama', 'MSTRG.16242' => 'ama', 'MSTRG.22285' => 'ama', 'MSTRG.22444' => 'ama', 'MSTRG.2349' => 'ama', 'MSTRG.26308' => 'ama', 'MSTRG.28296' => 'ama', 'MSTRG.9895' => 'ama', 'Nitab4.5_0000110g0060' => 'nta', 'Nitab4.5_0000420g0130' => 'nta', 'Nitab4.5_0000422g0030' => 'nta', 'Nitab4.5_0000560g0180' => 'nta', 'Nitab4.5_0000703g0100' => 'nta', 'Nitab4.5_0000786g0200' => 'nta', 'Nitab4.5_0001336g0020' => 'nta', 'Nitab4.5_0001796g0030' => 'nta', 'Nitab4.5_0003348g0060' => 'nta', 'Nitab4.5_0003698g0040' => 'nta', 'Nitab4.5_0003942g0090' => 'nta', 'Nitab4.5_0004775g0070' => 'nta', 'Nitab4.5_0004864g0030' => 'nta', 'Nitab4.5_0005615g0020' => 'nta', 'Nitab4.5_0009288g0030' => 'nta', 'Nitab4.5_0009341g0010' => 'nta', 'Nitab4.5_0009535g0010' => 'nta', 'Nn1g03995' => 'nnu', 'Nn1g04100' => 'nnu', 'Nn1g06530' => 'nnu', 'Nn3g16404' => 'nnu', 'Nn3g17212' => 'nnu', 'Nn3g20776' => 'nnu', 'Nn3g21923' => 'nnu', 'Nn5g27737' => 'nnu', 'Nn5g29461' => 'nnu', 'Nn7g38355' => 'nnu', 'Nn8g39873' => 'nnu', 'Oeu000548.2' => 'oeu', 'Oeu004672.1' => 'oeu', 'Oeu015605.2' => 'oeu', 'Oeu016092.1' => 'oeu', 'Oeu017879.3' => 'oeu', 'Oeu024910.1' => 'oeu', 'Oeu028965.1' => 'oeu', 'Oeu031269.1' => 'oeu', 'Oeu031270.1' => 'oeu', 'Oeu032535.1' => 'oeu', 'Oeu034151.1' => 'oeu', 'Oeu034152.1' => 'oeu', 'Oeu034588.2' => 'oeu', 'Oeu050846.1' => 'oeu', 'Oeu050849.2' => 'oeu', 'Oeu051063.2' => 'oeu', 'Oeu052368.1' => 'oeu', 'Oeu052370.1' => 'oeu', 'Os01g0210400' => 'osa', 'Os01g0304300' => 'osa', 'Os01g0749100' => 'osa', 'Os02g0745800' => 'osa', 'Os03g0769050' => 'osa', 'Os05g0531500' => 'osa', 'Os06g0724300' => 'osa', 'Os11g0198100' => 'osa', 'Peaxi162Scf00069g01425' => 'pax', 'Peaxi162Scf00280g00811' => 'pax', 'Peaxi162Scf00310g00615' => 'pax', 'Peaxi162Scf00362g00542' => 'pax', 'Peaxi162Scf00461g00310' => 'pax', 'Peaxi162Scf00530g00118' => 'pax', 'Peaxi162Scf00541g00057' => 'pax', 'Peaxi162Scf00661g00017' => 'pax', 'Peaxi162Scf00926g00027' => 'pax', 'Peaxi162Scf01064g00263' => 'pax', 'Peaxi162Scf01211g00135' => 'pax', 'PGR004G2336' => 'pgr', 'PGR042G0327' => 'pgr', 'PGR042G1957' => 'pgr', 'PGR042G2003' => 'pgr', 'PGR042G3929' => 'pgr', 'PGR083G1137' => 'pgr', 'PGR083G1364' => 'pgr', 'PGSC0003DMG400003381' => 'stu', 'PGSC0003DMG400003417' => 'stu', 'PGSC0003DMG400008981' => 'stu', 'PGSC0003DMG400012417' => 'stu', 'PGSC0003DMG400012823' => 'stu', 'PGSC0003DMG400016885' => 'stu', 'PGSC0003DMG400022812' => 'stu', 'PGSC0003DMG400029726' => 'stu', 'PGSC0003DMG401009243' => 'stu', 'PGSC0003DMG401031505' => 'stu', 'PGSC0003DMG402031505' => 'stu', 'Phvul.001G017600' => 'pvu', 'Phvul.002G193500' => 'pvu', 'Phvul.002G228900' => 'pvu', 'Phvul.002G236800' => 'pvu', 'Phvul.003G049500' => 'pvu', 'Phvul.005G072000' => 'pvu', 'Phvul.006G164800' => 'pvu', 'Phvul.006G185100' => 'pvu', 'Phvul.007G090000' => 'pvu', 'Potri.001G399800' => 'ptr', 'Potri.002G149900' => 'ptr', 'Potri.004G044100' => 'ptr', 'Potri.004G177600' => 'ptr', 'Potri.009G138000' => 'ptr', 'Potri.010G094000' => 'ptr', 'Potri.011G053000' => 'ptr', 'Potri.011G119300' => 'ptr', 'Potri.013G113700' => 'ptr', 'Potri.018G107800' => 'ptr', 'Potri.019G084100' => 'ptr', 'Pp3c14_23720' => 'ppa', 'Pp3c16_6340' => 'ppa', 'Pp3c23_13420' => 'ppa', 'Pp3c24_2740' => 'ppa', 'Pp3c25_860' => 'ppa', 'Pp3c8_21750' => 'ppa', 'Prupe.1G273000' => 'ppe', 'Prupe.1G273700' => 'ppe', 'Prupe.1G274100' => 'ppe', 'Prupe.2G023300' => 'ppe', 'Prupe.4G048000' => 'ppe', 'Prupe.4G080400' => 'ppe', 'Prupe.4G181200' => 'ppe', 'Prupe.8G056900' => 'ppe', 'Prupe.8G168700' => 'ppe', 'Psat1g189080' => 'psa', 'Psat1g204760' => 'psa', 'Psat4g175560' => 'psa', 'Psat4g177720' => 'psa', 'Psat5g244240' => 'psa', 'Psat6g010720' => 'psa', 'Psat6g187200' => 'psa', 'Psat7g072040' => 'psa', 'PSO017G3501' => 'pso', 'PSO063G2148' => 'pso', 'PSO063G5608' => 'pso', 'PSO210G6392' => 'pso', 'PSO541G2319' => 'pso', 'PSO541G2836' => 'pso', 'PSO541G4012' => 'pso', 'PSO541G6253' => 'pso', 'PSO675G0580' => 'pso', 'PSO675G0856' => 'pso', 'PSO675G5635' => 'pso', 'PSO675G9157' => 'pso', 'PSO832G1660' => 'pso', 'PSO832G1969' => 'pso', 'QL02p007186' => 'qlo', 'QL02p033904' => 'qlo', 'QL03p064391' => 'qlo', 'QL05p040593' => 'qlo', 'QL05p058242' => 'qlo', 'QL08p021825' => 'qlo', 'QL11p004981' => 'qlo', 'RcHm_v2.0_Chr1g0318301' => 'rch', 'RcHm_v2.0_Chr4g0418501' => 'rch', 'RcHm_v2.0_Chr4g0439971' => 'rch', 'RcHm_v2.0_Chr5g0008541' => 'rch', 'RcHm_v2.0_Chr5g0014101' => 'rch', 'RcHm_v2.0_Chr5g0014131' => 'rch', 'RcHm_v2.0_Chr5g0033621' => 'rch', 'RcHm_v2.0_Chr6g0272041' => 'rch', 'RcHm_v2.0_Chr6g0278831' => 'rch', 'Rhsim02G0130400' => 'rsi', 'Rhsim02G0171100' => 'rsi', 'Rhsim05G0053000' => 'rsi', 'Rhsim05G0053100' => 'rsi', 'Rhsim06G0096500' => 'rsi', 'Rhsim06G0096600' => 'rsi', 'Rhsim06G0199100' => 'rsi', 'Rhsim12G0062300' => 'rsi', 'Rhsim12G0062800' => 'rsi', 'Sabra02G0118600' => 'sbr', 'Sabra04G0027300' => 'sbr', 'Sabra04G0119500' => 'sbr', 'Sabra08G0112500' => 'sbr', 'Sabra11G0036800' => 'sbr', 'Sabra11G0103800' => 'sbr', 'Sabra13G0096300' => 'sbr', 'Sabra16G0262300' => 'sbr', 'Sabra18G0091700' => 'sbr', 'Sabra19G0095400' => 'sbr', 'SalBow6G3080' => 'sbo', 'SalBow7G1157' => 'sbo', 'SalBow7G2123' => 'sbo', 'SalBow7G2285' => 'sbo', 'SalBow7G3537' => 'sbo', 'SalBow8G2947' => 'sbo', 'SalBow8G4463' => 'sbo', 'SalBow8G5466' => 'sbo', 'Sc01g0001750' => 'sci', 'Sc02g0006640' => 'sci', 'Sc02g0006670' => 'sci', 'Sc04g0008220' => 'sci', 'Sc05g0006190' => 'sci', 'Sc08g0002760' => 'sci', 'Sc17g0006170' => 'sci', 'Sc22g0002050' => 'sci', 'Sc23g0001190' => 'sci', 'Sc24g0000980' => 'sci', 'Sed0006245' => 'sed', 'Sed0007543' => 'sed', 'Sed0009411' => 'sed', 'Sed0010765' => 'sed', 'Sed0012944' => 'sed', 'Sed0014682' => 'sed', 'Sed0016174' => 'sed', 'Sed0016796' => 'sed', 'Sed0020317' => 'sed', 'Sed0021467' => 'sed', 'SEGI_01316' => 'sgi', 'SEGI_03374' => 'sgi', 'SEGI_16265' => 'sgi', 'SEGI_18569' => 'sgi', 'SEGI_20351' => 'sgi', 'SEGI_26395' => 'sgi', 'SEGI_29469' => 'sgi', 'SEGI_34771' => 'sgi', 'SEGI_36769' => 'sgi', 'SEGI_37139' => 'sgi', 'SGA_v2.0_scaffold100G29687' => 'sas', 'SGA_v2.0_scaffold118G32472' => 'sas', 'SGA_v2.0_scaffold14G07051' => 'sas', 'SGA_v2.0_scaffold183G39845' => 'sas', 'SGA_v2.0_scaffold1G00174' => 'sas', 'SGA_v2.0_scaffold22G09714' => 'sas', 'SGA_v2.0_scaffold333G48992' => 'sas', 'SGA_v2.0_scaffold46G17491' => 'sas', 'SGA_v2.0_scaffold49G18294' => 'sas', 'SGA_v2.0_scaffold63G21658' => 'sas', 'SHI01741' => 'shi', 'SHI05771' => 'shi', 'SHI18077' => 'shi', 'SHI20525' => 'shi', 'SHI20527' => 'shi', 'SHI20528' => 'shi', 'SMO172G0185' => 'smo', 'SMO198G0020' => 'smo', 'SMO351G0006' => 'smo', 'SMO356G0118' => 'smo', 'SMO358G0296' => 'smo', 'SMO367G0079' => 'smo', 'SMO367G1277' => 'smo', 'Solyc01g014220.3' => 'sly', 'Solyc01g111770.2' => 'sly', 'Solyc02g078180.3' => 'sly', 'Solyc03g006430.3' => 'sly', 'Solyc03g006456.1' => 'sly', 'Solyc03g079860.2' => 'sly', 'Solyc04g079770.3' => 'sly', 'Solyc05g007430.4' => 'sly', 'Solyc07g063150.3' => 'sly', 'Solyc08g016620.3' => 'sly', 'Solyc09g057590.3' => 'sly', 'Solyc09g057600.1' => 'sly', 'Solyc10g009050.3' => 'sly', 'Solyc11g017420.2' => 'sly', 'Sopen01g053810' => 'spe', 'Sopen02g023040' => 'spe', 'Sopen03g002440' => 'spe', 'Sopen04g033350' => 'spe', 'Sopen05g003310' => 'spe', 'Sopen07g004050' => 'spe', 'Sopen07g031340' => 'spe', 'Sopen08g006990' => 'spe', 'Sopen10g004830' => 'spe', 'Sopen11g009370' => 'spe', 'Sp1g24450' => 'spa', 'Sp1g29670' => 'spa', 'Sp1g39600' => 'spa', 'Sp2g11080' => 'spa', 'Sp2g13970' => 'spa', 'Sp4g16130' => 'spa', 'Sp6g13080' => 'spa', 'Sp7g37270' => 'spa', 'TAR371G0065' => 'tar', 'TAR376G0340' => 'tar', 'TAR376G0435' => 'tar', 'TAR381G0002' => 'tar', 'TAR381G1236' => 'tar', 'TAR624G0055' => 'tar', 'TAR624G0324' => 'tar', 'TAR624G0696' => 'tar', 'TAR624G0906' => 'tar', 'TAR625G0107' => 'tar', 'TAR626G0015' => 'tar', 'TAR626G1356' => 'tar', 'TAR627G0888' => 'tar', 'TAR628G0399' => 'tar', 'TAR628G1327' => 'tar', 'TAR629G2831' => 'tar', 'TAR629G2874' => 'tar', 'TAR633G1432' => 'tar', 'TAR633G2771' => 'tar', 'THA.LOC104803394' => 'tha', 'THA.LOC104805153' => 'tha', 'THA.LOC104806784' => 'tha', 'THA.LOC104810473' => 'tha', 'THA.LOC104813100' => 'tha', 'THA.LOC104814215' => 'tha', 'THA.LOC104815554' => 'tha', 'THA.LOC104820544' => 'tha', 'THA.LOC104824754' => 'tha', 'THA.LOC104827717' => 'tha', 'Thecc.02G031400' => 'tca', 'Thecc.02G055900' => 'tca', 'Thecc.02G350800' => 'tca', 'Thecc.06G150900' => 'tca', 'Thecc.06G186600' => 'tca', 'Thecc.07G089600' => 'tca', 'Thecc.08G020400' => 'tca', 'Thecc.08G182100' => 'tca', 'Thhalv10000873m.g' => 'esa', 'Thhalv10004185m.g' => 'esa', 'Thhalv10006981m.g' => 'esa', 'Thhalv10007204m.g' => 'esa', 'Thhalv10011374m.g' => 'esa', 'Thhalv10013482m.g' => 'esa', 'Thhalv10017801m.g' => 'esa', 'Thhalv10024983m.g' => 'esa', 'TPR.G12072' => 'tpr', 'TPR.G15769' => 'tpr', 'TPR.G16504' => 'tpr', 'TPR.G16506' => 'tpr', 'TPR.G24345' => 'tpr', 'TPR.G26666' => 'tpr', 'TPR.G27320' => 'tpr', 'TPR.G31819' => 'tpr', 'TPR.G38879' => 'tpr', 'TPR.G39015' => 'tpr', 'TPR.G8819' => 'tpr', 'TWI09G0924' => 'twi', 'TWI12G0811' => 'twi', 'TWI12G1294' => 'twi', 'TWI31G0150' => 'twi', 'TWI36G1262' => 'twi', 'TWI38G1287' => 'twi', 'TWI38G1633' => 'twi', 'TWI38G1982' => 'twi', 'TWI39G0116' => 'twi', 'TWI60G1011' => 'twi', 'TWI63G0171' => 'twi', 'TWI73G0839' => 'twi', 'TWI79G1511' => 'twi', 'unitig_0.g915' => 'ugi', 'unitig_0.g916' => 'ugi', 'unitig_21.g20219' => 'ugi', 'unitig_21.g20416' => 'ugi', 'unitig_578.g16132' => 'ugi', 'unitig_578.g16718' => 'ugi', 'unitig_62.g23481' => 'ugi', 'unitig_744.g24535' => 'ugi', 'unitig_749.g13525' => 'ugi', 'vmacro01248' => 'vma', 'vmacro02290' => 'vma', 'vmacro10946' => 'vma', 'vmacro11865' => 'vma', 'vmacro12493' => 'vma', 'vmacro17322' => 'vma', 'vmacro21599' => 'vma', 'vmacro23041' => 'vma', 'VMungo0251G0004' => 'vmu', 'VMungo0251G2639' => 'vmu', 'VMungo0251G2967' => 'vmu', 'VMungo0540G0864' => 'vmu', 'VMungo0540G1569' => 'vmu', 'VMungo0647G0317' => 'vmu', 'VMungo0720G1373' => 'vmu', 'VMungo0720G1508' => 'vmu', 'VMungo1080G0485' => 'vmu', 'VMungo1215G3177' => 'vmu', 'Zm00001eb112600' => 'zma', 'Zm00001eb120220' => 'zma', 'Zm00001eb153240' => 'zma', 'Zm00001eb168880' => 'zma', 'Zm00001eb213920' => 'zma', 'Zm00001eb228280' => 'zma', 'Zm00001eb254580' => 'zma', 'Zm00001eb272180' => 'zma', 'Zm00001eb293190' => 'zma', 'Zm00001eb322930' => 'zma', 'Zm00001eb353360' => 'zma', 'Zm00001eb353390' => 'zma', 'Zm00001eb353430' => 'zma', 'Zm00001eb353440' => 'zma', 'Zm00001eb353780' => 'zma' ), 'gf_id' => 'HOM05D000499', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000499' ), 'data_identifier' => 'HOM05D000499', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000499', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1066', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p29780' => 'bna', 'A02p33180' => 'bna', 'A03p16470' => 'bna', 'A03p66010' => 'bna', 'A04p25970' => 'bna', 'A06p01270' => 'bna', 'A06p46080' => 'bna', 'A07p11400' => 'bna', 'A08p01840' => 'bna', 'A08p08230' => 'bna', 'A08p25740' => 'bna', 'A09p32070' => 'bna', 'A09p37830' => 'bna', 'A09p42840' => 'bna', 'A09p42850' => 'bna', 'Aa31LG10G2060' => 'aar', 'Aa31LG2G7410' => 'aar', 'Aa31LG6G10200' => 'aar', 'Aa31LG6G16680' => 'aar', 'Aa31LG6G8470' => 'aar', 'Aa31LG9G12730' => 'aar', 'Aa31LG9G13680' => 'aar', 'Aa31LG9G14920' => 'aar', 'Aa31LG9G6650' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4977' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5467' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3254' => 'aag', 'Actinidia02578' => 'ach', 'Actinidia07693' => 'ach', 'Actinidia08413' => 'ach', 'Actinidia08414' => 'ach', 'Actinidia15289' => 'ach', 'Actinidia19871' => 'ach', 'Actinidia21475' => 'ach', 'Actinidia22576' => 'ach', 'Actinidia28327' => 'ach', 'Actinidia32491' => 'ach', 'Actinidia39463' => 'ach', 'Actinidia39571' => 'ach', 'Ah.01g013750' => 'amhyb', 'Ah.01g023210' => 'amhyb', 'Ah.04g164850' => 'amhyb', 'Ah.05g178060' => 'amhyb', 'Ah.07g204270' => 'amhyb', 'Ah.07g208480' => 'amhyb', 'Ah.09g237410' => 'amhyb', 'Ah.14g089460' => 'amhyb', 'AL1G41790' => 'aly', 'AL1G49050' => 'aly', 'AL1G53810' => 'aly', 'AL1G61400' => 'aly', 'AL4G18580' => 'aly', 'AL5G12510' => 'aly', 'AL5G12540' => 'aly', 'AL6G43230' => 'aly', 'AL7G10370' => 'aly', 'AL7G19250' => 'aly', 'AL8G12240' => 'aly', 'AL8G18540' => 'aly', 'Aqoxy1G02409' => 'aox', 'Aqoxy2G03993' => 'aox', 'Aqoxy3G03357' => 'aox', 'Aqoxy4G00785' => 'aox', 'Aqoxy5G02598' => 'aox', 'Aqoxy6G00132' => 'aox', 'Aqoxy7G01776' => 'aox', 'Aqoxy7G02316' => 'aox', 'Aqoxy7G03973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.12AFKW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B8730' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27IQR1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3F75VG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3RE0GA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41TCQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.527VTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FIR39' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5W8UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DA38EV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ63HS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H1I32C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HC27T5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4M8AP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7N3CZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9UVDZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LS1NQA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT1D4B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SKC4TM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCFV76' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF9Q1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQWD9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1ZM88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WE07RT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YCK7VH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJE6Q6' => 'arhy', 'AT1G28240' => 'ath', 'AT1G34550' => 'ath', 'AT1G53040' => 'ath', 'AT2G02910' => 'ath', 'AT4G09630' => 'ath', 'AT4G38500' => 'ath', 'AT5G42660' => 'ath', 'AT5G46220' => 'ath', 'ATR0152G026' => 'atr', 'ATR0564G343' => 'atr', 'ATR0706G151' => 'atr', 'ATR0733G207' => 'atr', 'ATR0751G234' => 'atr', 'ATR0807G048' => 'atr', 'ATR1091G084' => 'atr', 'Atru.chr10.1229' => 'acertr', 'Atru.chr10.1230' => 'acertr', 'Atru.chr10.1874' => 'acertr', 'Atru.chr11.1808' => 'acertr', 'Atru.chr13.1795' => 'acertr', 'Atru.chr13.570' => 'acertr', 'Atru.chr2.2608' => 'acertr', 'Atru.chr2.2609' => 'acertr', 'Atru.chr5.3428' => 'acertr', 'Atru.chr8.1171' => 'acertr', 'AUR62004651' => 'cqu', 'AUR62008675' => 'cqu', 'AUR62010014' => 'cqu', 'AUR62013004' => 'cqu', 'AUR62014825' => 'cqu', 'AUR62015015' => 'cqu', 'AUR62015151' => 'cqu', 'AUR62017020' => 'cqu', 'AUR62019422' => 'cqu', 'AUR62023570' => 'cqu', 'AUR62025571' => 'cqu', 'AUR62029098' => 'cqu', 'AUR62033863' => 'cqu', 'AUR62034296' => 'cqu', 'AUR62040075' => 'cqu', 'BcaB02g07334' => 'bca', 'BcaB02g10575' => 'bca', 'BcaB03g12119' => 'bca', 'BcaB03g12120' => 'bca', 'BcaB03g13945' => 'bca', 'BcaB04g17123' => 'bca', 'BcaB04g17867' => 'bca', 'BcaB04g19839' => 'bca', 'BcaB07g30317' => 'bca', 'BcaB07g32432' => 'bca', 'BcaB07g33362' => 'bca', 'BcaB08g36611' => 'bca', 'BcaC01g00028' => 'bca', 'BcaC01g01356' => 'bca', 'BcaC01g02034' => 'bca', 'BcaC01g06051' => 'bca', 'BcaC03g16839' => 'bca', 'BcaC03g17176' => 'bca', 'BcaC05g26829' => 'bca', 'BcaC06g31490' => 'bca', 'BcaC06g35344' => 'bca', 'BcaC06g36570' => 'bca', 'BcaC07g37537' => 'bca', 'BcaC08g43491' => 'bca', 'BcaC08g43773' => 'bca', 'BcaNung00234' => 'bca', 'BcaNung01982' => 'bca', 'BcaNung03707' => 'bca', 'BcaNung06454' => 'bca', 'BolC2t10762H' => 'bol', 'BolC2t11191H' => 'bol', 'BolC3t14322H' => 'bol', 'BolC3t19747H' => 'bol', 'BolC3t21425H' => 'bol', 'BolC4t27800H' => 'bol', 'BolC5t31423H' => 'bol', 'BolC6t35951H' => 'bol', 'BolC6t36282H' => 'bol', 'BolC7t40678H' => 'bol', 'BolC7t40679H' => 'bol', 'BolC7t42222H' => 'bol', 'BolC7t43492H' => 'bol', 'BolC7t46785H' => 'bol', 'BolC8t47853H' => 'bol', 'BolC9t56805H' => 'bol', 'BraA02t08000Z' => 'bra', 'BraA02t08341Z' => 'bra', 'BraA03t10936Z' => 'bra', 'BraA03t15657Z' => 'bra', 'BraA04t18100Z' => 'bra', 'BraA05t20523Z' => 'bra', 'BraA06t23353Z' => 'bra', 'BraA06t27473Z' => 'bra', 'BraA06t27769Z' => 'bra', 'BraA07t28928Z' => 'bra', 'BraA08t32236Z' => 'bra', 'BraA08t32841Z' => 'bra', 'BraA08t34524Z' => 'bra', 'BraA09t38742Z' => 'bra', 'BraA09t39295Z' => 'bra', 'C02p47180' => 'bna', 'C02p50990' => 'bna', 'C03p19360' => 'bna', 'C03p74950' => 'bna', 'C03p91000' => 'bna', 'C04p63260' => 'bna', 'C05p27050' => 'bna', 'C06p08750' => 'bna', 'C06p11490' => 'bna', 'C07p02820' => 'bna', 'C07p17180' => 'bna', 'C07p29440' => 'bna', 'C07p63730' => 'bna', 'C09p39260' => 'bna', 'CAN.G1164.34' => 'can', 'CAN.G1164.39' => 'can', 'CAN.G1530.3' => 'can', 'CAN.G162.61' => 'can', 'CAN.G176.6' => 'can', 'CAN.G289.49' => 'can', 'CAN.G370.21' => 'can', 'CAN.G370.22' => 'can', 'CAN.G371.117' => 'can', 'CAN.G58.37' => 'can', 'CAN.G588.98' => 'can', 'CANSAT21G2266' => 'cansat', 'CANSAT25G2799' => 'cansat', 'CANSAT35G0862' => 'cansat', 'CANSAT35G1704' => 'cansat', 'CANSAT35G1760' => 'cansat', 'CANSAT56G3971' => 'cansat', 'CANSAT56G4116' => 'cansat', 'CANSAT80G1259' => 'cansat', 'CARHR027730' => 'chi', 'CARHR033880' => 'chi', 'CARHR043270' => 'chi', 'CARHR145330' => 'chi', 'CARHR145340' => 'chi', 'CARHR175570' => 'chi', 'CARHR181570' => 'chi', 'CARHR258470' => 'chi', 'CARHR260490' => 'chi', 'CARHR294220' => 'chi', 'Carub.0001s2668' => 'cru', 'Carub.0001s3257' => 'cru', 'Carub.0001s4220' => 'cru', 'Carub.0005s0179' => 'cru', 'Carub.0006s2807' => 'cru', 'Carub.0007s0039' => 'cru', 'Carub.0008s0169' => 'cru', 'Carub.0008s0636' => 'cru', 'Ca_00338_v3' => 'car', 'Ca_00542_v3' => 'car', 'Ca_01844_v3' => 'car', 'Ca_10611_v3' => 'car', 'Ca_13326_v3' => 'car', 'Ca_17944_v3' => 'car', 'Ca_18546_v3' => 'car', 'Ca_24219_v3' => 'car', 'Ca_29972_v3' => 'car', 'CBR_g3681' => 'cbr', 'CBR_g40021' => 'cbr', 'Cc01_g08140' => 'ccan', 'Cc02_g13410' => 'ccan', 'Cc02_g37480' => 'ccan', 'Cc05_g12030' => 'ccan', 'Cc09_g03370' => 'ccan', 'Cc09_g10300' => 'ccan', 'Cc10_g03530' => 'ccan', 'Cc10_g11380' => 'ccan', 'CDE01G0176' => 'cde', 'CDE02G0675' => 'cde', 'CDE02G0942' => 'cde', 'CDE02G1153' => 'cde', 'CDE02G4177' => 'cde', 'CDE04G2117' => 'cde', 'CDE04G2736' => 'cde', 'CDE08G1161' => 'cde', 'CDE09G1238' => 'cde', 'Cfa000467' => 'cfa', 'Cfa000947' => 'cfa', 'Cfa004969' => 'cfa', 'Cfa005284' => 'cfa', 'Cfa008993' => 'cfa', 'Cfa018187' => 'cfa', 'Cfa018454' => 'cfa', 'Cfa020585' => 'cfa', 'Ciclev10000424m.g' => 'ccl', 'Ciclev10003605m.g' => 'ccl', 'Ciclev10007828m.g' => 'ccl', 'Ciclev10014620m.g' => 'ccl', 'Ciclev10015169m.g' => 'ccl', 'Ciclev10018291m.g' => 'ccl', 'Ciclev10028256m.g' => 'ccl', 'Ciclev10033822m.g' => 'ccl', 'CiPaw.05G060300' => 'cil', 'CiPaw.05G085000' => 'cil', 'CiPaw.06G083700' => 'cil', 'CiPaw.06G120300' => 'cil', 'CiPaw.09G060500' => 'cil', 'CiPaw.09G123800' => 'cil', 'CiPaw.11G169700' => 'cil', 'CiPaw.12G118300' => 'cil', 'CiPaw.15G071000' => 'cil', 'CiPaw.15G081900' => 'cil', 'ClCG01G024610' => 'cla', 'ClCG03G006070' => 'cla', 'ClCG05G019250' => 'cla', 'ClCG09G009500' => 'cla', 'ClCG11G008200' => 'cla', 'ClCG11G018080' => 'cla', 'COL.COLO4_17373' => 'col', 'COL.COLO4_22994' => 'col', 'COL.COLO4_26389' => 'col', 'COL.COLO4_27170' => 'col', 'COL.COLO4_31074' => 'col', 'COL.COLO4_31465' => 'col', 'COL.COLO4_36438' => 'col', 'COL.COLO4_36439' => 'col', 'Cpa.g.c38781' => 'cpa', 'Cpa.g.sc128.12' => 'cpa', 'Cpa.g.sc166.7' => 'cpa', 'Cpa.g.sc166.8' => 'cpa', 'Cpa.g.sc20.111' => 'cpa', 'Cpa.g.sc27.31' => 'cpa', 'Cpa.g.sc64.36' => 'cpa', 'Cpa.g.sc64.37' => 'cpa', 'Cpa.g.sc66.49' => 'cpa', 'Cpa.g.sc80.64' => 'cpa', 'CsaV3_1G012320' => 'csa', 'CsaV3_2G008480' => 'csa', 'CsaV3_2G033450' => 'csa', 'CsaV3_3G044830' => 'csa', 'CsaV3_4G033710' => 'csa', 'CsaV3_6G051730' => 'csa', 'CsaV3_7G025350' => 'csa', 'CSS0001067' => 'camsi', 'CSS0005996' => 'camsi', 'CSS0006590' => 'camsi', 'CSS0009673' => 'camsi', 'CSS0010201' => 'camsi', 'CSS0010549' => 'camsi', 'CSS0011364' => 'camsi', 'CSS0014473' => 'camsi', 'CSS0014961' => 'camsi', 'CSS0020191' => 'camsi', 'CSS0021165' => 'camsi', 'CSS0022306' => 'camsi', 'CSS0030591' => 'camsi', 'CSS0030696' => 'camsi', 'CSS0032653' => 'camsi', 'CSS0037487' => 'camsi', 'CSS0041102' => 'camsi', 'CSS0041261' => 'camsi', 'CSS0046246' => 'camsi', 'CSS0049256' => 'camsi', 'DCAR_004075' => 'dca', 'DCAR_011538' => 'dca', 'DCAR_019553' => 'dca', 'DCAR_020952' => 'dca', 'DCAR_021739' => 'dca', 'DCAR_027407' => 'dca', 'DCAR_027913' => 'dca', 'DCAR_028066' => 'dca', 'Dinv05899' => 'din', 'Dinv07563' => 'din', 'Dinv08010' => 'din', 'Dinv14125' => 'din', 'Dinv20172' => 'din', 'Dinv30743' => 'din', 'Dinv31229' => 'din', 'Dinv34162' => 'din', 'Dinv36028' => 'din', 'Dinv39368' => 'din', 'Dinv40565' => 'din', 'Dinv41706' => 'din', 'Duzib052G0089' => 'dzi', 'Duzib116G0641' => 'dzi', 'Duzib132G0069' => 'dzi', 'Duzib132G1219' => 'dzi', 'Duzib147G0278' => 'dzi', 'Duzib160G0480' => 'dzi', 'Duzib170G0661' => 'dzi', 'Duzib177G0591' => 'dzi', 'Duzib187G1353' => 'dzi', 'Duzib192G0858' => 'dzi', 'Duzib192G0883' => 'dzi', 'Duzib213G0506' => 'dzi', 'Duzib235G0289' => 'dzi', 'Duzib251G0422' => 'dzi', 'ECA232G3898' => 'eca', 'ECA233G5950' => 'eca', 'ECA234G1699' => 'eca', 'ECA234G2421' => 'eca', 'ECA236G0426' => 'eca', 'ECA236G4331' => 'eca', 'ECA248G2573' => 'eca', 'EL10Ac1g00077' => 'bvu', 'EL10Ac1g01746' => 'bvu', 'EL10Ac2g03464' => 'bvu', 'EL10Ac4g08176' => 'bvu', 'EL10Ac7g17521' => 'bvu', 'EL10Ac8g20386' => 'bvu', 'EL10Ac9g21343' => 'bvu', 'EL10Ac9g22688' => 'bvu', 'Eucgr.B03434' => 'egr', 'Eucgr.D00618' => 'egr', 'Eucgr.E02395' => 'egr', 'Eucgr.F01129' => 'egr', 'Eucgr.F02622' => 'egr', 'Eucgr.F04207' => 'egr', 'FAN01G0570' => 'fan', 'FAN03G3351' => 'fan', 'FAN06G3702' => 'fan', 'FAN07G2149' => 'fan', 'FAN10G3758' => 'fan', 'FAN11G1170' => 'fan', 'FAN11G2050' => 'fan', 'FAN11G2724' => 'fan', 'FAN12G1700' => 'fan', 'FAN12G2028' => 'fan', 'FAN15G1160' => 'fan', 'FAN15G3063' => 'fan', 'FAN16G2540' => 'fan', 'FAN16G3077' => 'fan', 'FAN16G3624' => 'fan', 'FAN17G0221' => 'fan', 'FAN20G2492' => 'fan', 'FAN20G2905' => 'fan', 'FAN21G0548' => 'fan', 'FAN21G1300' => 'fan', 'FAN22G0077' => 'fan', 'FAN22G1315' => 'fan', 'FAN24G1280' => 'fan', 'FAN24G1445' => 'fan', 'FAN24G3527' => 'fan', 'FAN25G0464' => 'fan', 'FAN25G2885' => 'fan', 'FAN25G3270' => 'fan', 'FAN27G1101' => 'fan', 'FAN27G2846' => 'fan', 'FAN27G3524' => 'fan', 'FvH4_2g11770' => 'fve', 'FvH4_2g15630' => 'fve', 'FvH4_3g05570' => 'fve', 'FvH4_3g09110' => 'fve', 'FvH4_3g19940' => 'fve', 'FvH4_4g04821' => 'fve', 'FvH4_4g31480' => 'fve', 'FvH4_7g01740' => 'fve', 'Glyma.05G130400' => 'gma', 'Glyma.05G156400' => 'gma', 'Glyma.07G197000' => 'gma', 'Glyma.08G085151' => 'gma', 'Glyma.08G114500' => 'gma', 'Glyma.08G300400' => 'gma', 'Glyma.10G215800' => 'gma', 'Glyma.12G224400' => 'gma', 'Glyma.13G179300' => 'gma', 'Glyma.13G218151' => 'gma', 'Glyma.13G238800' => 'gma', 'Glyma.13G276900' => 'gma', 'Glyma.14G078200' => 'gma', 'Glyma.15G074500' => 'gma', 'Glyma.15G094100' => 'gma', 'Glyma.17G247200' => 'gma', 'Glyma.18G120100' => 'gma', 'Glyma.20G176000' => 'gma', 'Gohir.A01G063600' => 'ghi', 'Gohir.A01G170301' => 'ghi', 'Gohir.A02G060500' => 'ghi', 'Gohir.A05G133850' => 'ghi', 'Gohir.A05G161400' => 'ghi', 'Gohir.A06G012900' => 'ghi', 'Gohir.A06G035901' => 'ghi', 'Gohir.A06G127100' => 'ghi', 'Gohir.A06G210500' => 'ghi', 'Gohir.A08G008650' => 'ghi', 'Gohir.A09G072700' => 'ghi', 'Gohir.A09G088301' => 'ghi', 'Gohir.A10G040600' => 'ghi', 'Gohir.A12G036300' => 'ghi', 'Gohir.A12G143350' => 'ghi', 'Gohir.A12G165500' => 'ghi', 'Gohir.A13G145700' => 'ghi', 'Gohir.D01G050000' => 'ghi', 'Gohir.D01G051366' => 'ghi', 'Gohir.D01G161350' => 'ghi', 'Gohir.D02G065900' => 'ghi', 'Gohir.D05G164200' => 'ghi', 'Gohir.D05G355500' => 'ghi', 'Gohir.D06G010400' => 'ghi', 'Gohir.D06G111250' => 'ghi', 'Gohir.D06G132000' => 'ghi', 'Gohir.D06G210500' => 'ghi', 'Gohir.D07G165675' => 'ghi', 'Gohir.D08G062240' => 'ghi', 'Gohir.D08G086101' => 'ghi', 'Gohir.D08G138060' => 'ghi', 'Gohir.D09G072300' => 'ghi', 'Gohir.D10G041400' => 'ghi', 'Gohir.D11G191020' => 'ghi', 'Gohir.D11G212066' => 'ghi', 'Gohir.D12G036300' => 'ghi', 'Gohir.D12G168600' => 'ghi', 'Gohir.D13G150600' => 'ghi', 'Gorai.001G057300' => 'gra', 'Gorai.002G069900' => 'gra', 'Gorai.002G200000' => 'gra', 'Gorai.003G067600' => 'gra', 'Gorai.005G074800' => 'gra', 'Gorai.006G087300' => 'gra', 'Gorai.008G037500' => 'gra', 'Gorai.008G181400' => 'gra', 'Gorai.009G169400' => 'gra', 'Gorai.009G387900' => 'gra', 'Gorai.010G013300' => 'gra', 'Gorai.010G153800' => 'gra', 'Gorai.010G255800' => 'gra', 'Gorai.011G043700' => 'gra', 'Gorai.011G198900' => 'gra', 'Gorai.013G168400' => 'gra', 'GSVIVG01005212001' => 'vvi', 'GSVIVG01006163001' => 'vvi', 'GSVIVG01009625001' => 'vvi', 'GSVIVG01014338001' => 'vvi', 'GSVIVG01020005001' => 'vvi', 'GSVIVG01021450001' => 'vvi', 'GSVIVG01023975001' => 'vvi', 'GSVIVG01034490001' => 'vvi', 'HanXRQChr04g0112071' => 'han', 'HanXRQChr05g0131151' => 'han', 'HanXRQChr09g0262371' => 'han', 'HanXRQChr09g0268401' => 'han', 'HanXRQChr10g0279241' => 'han', 'HanXRQChr10g0297961' => 'han', 'HanXRQChr11g0326231' => 'han', 'HanXRQChr11g0328471' => 'han', 'HanXRQChr16g0507941' => 'han', 'HanXRQChr17g0560211' => 'han', 'Haze_02108' => 'cav', 'Haze_02428' => 'cav', 'Haze_05593' => 'cav', 'Haze_06448' => 'cav', 'Haze_09427' => 'cav', 'Haze_12022' => 'cav', 'Haze_17612' => 'cav', 'Haze_17928' => 'cav', 'Hma1.2p1_0032F.1_g019250' => 'hma', 'Hma1.2p1_0163F.1_g072690' => 'hma', 'Hma1.2p1_0265F.1_g106710' => 'hma', 'Hma1.2p1_0286F.1_g113970' => 'hma', 'Hma1.2p1_0363F.1_g136640' => 'hma', 'Hma1.2p1_0584F.1_g183470' => 'hma', 'Hma1.2p1_0885F.1_g232570' => 'hma', 'HPP92_006022' => 'vpl', 'HPP92_007320' => 'vpl', 'HPP92_011521' => 'vpl', 'HPP92_019387' => 'vpl', 'HPP92_024038' => 'vpl', 'Hund05891' => 'sun', 'Hund06450' => 'sun', 'Hund12053' => 'sun', 'Hund16800' => 'sun', 'Hund21222' => 'sun', 'Hund22896' => 'sun', 'Hund23746' => 'sun', 'Hund27083' => 'sun', 'Lalb_Chr02g0141831' => 'lal', 'Lalb_Chr02g0141841' => 'lal', 'Lalb_Chr05g0220411' => 'lal', 'Lalb_Chr06g0162081' => 'lal', 'Lalb_Chr09g0327651' => 'lal', 'Lalb_Chr13g0295051' => 'lal', 'Lalb_Chr15g0086801' => 'lal', 'Lalb_Chr16g0383781' => 'lal', 'Lalb_Chr16g0383791' => 'lal', 'Lalb_Chr18g0055441' => 'lal', 'Lalb_Chr18g0059611' => 'lal', 'Lalb_Chr20g0109661' => 'lal', 'Lalb_Chr20g0109831' => 'lal', 'Lalb_Chr20g0121871' => 'lal', 'Lalb_Chr22g0355361' => 'lal', 'Lalb_Chr25g0286371' => 'lal', 'Lj1A1187G43' => 'lonja', 'Lj1A1205T50' => 'lonja', 'Lj1A800G33' => 'lonja', 'Lj1C1187T7' => 'lonja', 'Lj1C843T11' => 'lonja', 'Lj1g0010940' => 'lja', 'Lj2A288T69' => 'lonja', 'Lj3g0024276' => 'lja', 'Lj4A47T76' => 'lonja', 'Lj4g0005805' => 'lja', 'Lj4g0006097' => 'lja', 'Lj4g0008528' => 'lja', 'Lj4g0024907' => 'lja', 'Lj5g0012472' => 'lja', 'Lj5g0018648' => 'lja', 'Lj6C789G1' => 'lonja', 'Lj6g0004000' => 'lja', 'Lj7A292G67' => 'lonja', 'Lj7A292T64' => 'lonja', 'Lj9A400T58' => 'lonja', 'Lsat_1_v5_gn_1_126181' => 'lsa', 'Lsat_1_v5_gn_4_123041' => 'lsa', 'Lsat_1_v5_gn_4_133620' => 'lsa', 'Lsat_1_v5_gn_4_53221' => 'lsa', 'Lsat_1_v5_gn_4_71961' => 'lsa', 'Lsat_1_v5_gn_7_105241' => 'lsa', 'Lsat_1_v5_gn_7_21361' => 'lsa', 'Lsat_1_v5_gn_7_28860' => 'lsa', 'Lsat_1_v5_gn_7_31260' => 'lsa', 'Lsat_1_v5_gn_8_52801' => 'lsa', 'Manes.02G191400' => 'mes', 'Manes.03G110100' => 'mes', 'Manes.04G071100' => 'mes', 'Manes.05G100500' => 'mes', 'Manes.05G164700' => 'mes', 'Manes.15G087000' => 'mes', 'Manes.15G121500' => 'mes', 'Manes.16G028300' => 'mes', 'Manes.17G046100' => 'mes', 'Manes.17G069800' => 'mes', 'Manes.18G100500' => 'mes', 'Mapoly0002s0109' => 'mpo', 'Mapoly0024s0007' => 'mpo', 'Mapoly0089s0032' => 'mpo', 'MBI04_g42241_MAGBIO' => 'mbi', 'MBI05_g11988_MAGBIO' => 'mbi', 'MBI05_g35452_MAGBIO' => 'mbi', 'MBI07_g30179_MAGBIO' => 'mbi', 'MBI07_g35859_MAGBIO' => 'mbi', 'MBI07_g35860_MAGBIO' => 'mbi', 'MBI07_g37166_MAGBIO' => 'mbi', 'MBI08_g18172_MAGBIO' => 'mbi', 'MBI09_g08441_MAGBIO' => 'mbi', 'MBI13_g01676_MAGBIO' => 'mbi', 'MBI14_g42955_MAGBIO' => 'mbi', 'MBI16_g13161_MAGBIO' => 'mbi', 'MBI17_g27204_MAGBIO' => 'mbi', 'MBI19_g21595_MAGBIO' => 'mbi', 'MD00G1148400' => 'mdo', 'MD02G1301200' => 'mdo', 'MD03G1227800' => 'mdo', 'MD05G1041100' => 'mdo', 'MD05G1124800' => 'mdo', 'MD05G1284000' => 'mdo', 'MD05G1338800' => 'mdo', 'MD05G1338900' => 'mdo', 'MD07G1022800' => 'mdo', 'MD10G1047500' => 'mdo', 'MD10G1127500' => 'mdo', 'MD10G1262300' => 'mdo', 'MD10G1293800' => 'mdo', 'MD16G1074300' => 'mdo', 'Medtr1g021670' => 'mtr', 'Medtr1g096320' => 'mtr', 'Medtr2g013690' => 'mtr', 'Medtr2g019450' => 'mtr', 'Medtr2g085170' => 'mtr', 'Medtr4g088785' => 'mtr', 'Medtr8g055930' => 'mtr', 'Medtr8g085850' => 'mtr', 'MELO3C002605.2' => 'cme', 'MELO3C003891.2' => 'cme', 'MELO3C004012.2' => 'cme', 'MELO3C007134.2' => 'cme', 'MELO3C008118.2' => 'cme', 'MELO3C016700.2' => 'cme', 'MELO3C024127.2' => 'cme', 'MELO3C033361.2' => 'cme', 'MELO3C033362.2' => 'cme', 'Migut.C00430' => 'egut', 'Migut.C01246' => 'egut', 'Migut.E00101' => 'egut', 'Migut.H01486' => 'egut', 'Migut.H01939' => 'egut', 'Migut.K00360' => 'egut', 'Migut.M00910' => 'egut', 'Migut.M01139' => 'egut', 'Migut.N02677' => 'egut', 'MSTRG.13252' => 'ama', 'MSTRG.14701' => 'ama', 'MSTRG.1521' => 'ama', 'MSTRG.15884' => 'ama', 'MSTRG.16242' => 'ama', 'MSTRG.22285' => 'ama', 'MSTRG.22444' => 'ama', 'MSTRG.2349' => 'ama', 'MSTRG.26308' => 'ama', 'MSTRG.28296' => 'ama', 'MSTRG.9895' => 'ama', 'Nitab4.5_0000110g0060' => 'nta', 'Nitab4.5_0000420g0130' => 'nta', 'Nitab4.5_0000422g0030' => 'nta', 'Nitab4.5_0000560g0180' => 'nta', 'Nitab4.5_0000703g0100' => 'nta', 'Nitab4.5_0000786g0200' => 'nta', 'Nitab4.5_0001336g0020' => 'nta', 'Nitab4.5_0001796g0030' => 'nta', 'Nitab4.5_0003348g0060' => 'nta', 'Nitab4.5_0003698g0040' => 'nta', 'Nitab4.5_0003942g0090' => 'nta', 'Nitab4.5_0004775g0070' => 'nta', 'Nitab4.5_0004864g0030' => 'nta', 'Nitab4.5_0005615g0020' => 'nta', 'Nitab4.5_0009288g0030' => 'nta', 'Nitab4.5_0009341g0010' => 'nta', 'Nitab4.5_0009535g0010' => 'nta', 'Nn1g03995' => 'nnu', 'Nn1g04100' => 'nnu', 'Nn1g06530' => 'nnu', 'Nn3g16404' => 'nnu', 'Nn3g17212' => 'nnu', 'Nn3g20776' => 'nnu', 'Nn3g21923' => 'nnu', 'Nn5g27737' => 'nnu', 'Nn5g29461' => 'nnu', 'Nn7g38355' => 'nnu', 'Nn8g39873' => 'nnu', 'Oeu000548.2' => 'oeu', 'Oeu004672.1' => 'oeu', 'Oeu015605.2' => 'oeu', 'Oeu016092.1' => 'oeu', 'Oeu017879.3' => 'oeu', 'Oeu024910.1' => 'oeu', 'Oeu028965.1' => 'oeu', 'Oeu031269.1' => 'oeu', 'Oeu031270.1' => 'oeu', 'Oeu032535.1' => 'oeu', 'Oeu034151.1' => 'oeu', 'Oeu034152.1' => 'oeu', 'Oeu034588.2' => 'oeu', 'Oeu050846.1' => 'oeu', 'Oeu050849.2' => 'oeu', 'Oeu051063.2' => 'oeu', 'Oeu052368.1' => 'oeu', 'Oeu052370.1' => 'oeu', 'Os01g0210400' => 'osa', 'Os01g0304300' => 'osa', 'Os01g0749100' => 'osa', 'Os02g0745800' => 'osa', 'Os03g0769050' => 'osa', 'Os05g0531500' => 'osa', 'Os06g0724300' => 'osa', 'Os11g0198100' => 'osa', 'Peaxi162Scf00069g01425' => 'pax', 'Peaxi162Scf00280g00811' => 'pax', 'Peaxi162Scf00310g00615' => 'pax', 'Peaxi162Scf00362g00542' => 'pax', 'Peaxi162Scf00461g00310' => 'pax', 'Peaxi162Scf00530g00118' => 'pax', 'Peaxi162Scf00541g00057' => 'pax', 'Peaxi162Scf00661g00017' => 'pax', 'Peaxi162Scf00926g00027' => 'pax', 'Peaxi162Scf01064g00263' => 'pax', 'Peaxi162Scf01211g00135' => 'pax', 'PGR004G2336' => 'pgr', 'PGR042G0327' => 'pgr', 'PGR042G1957' => 'pgr', 'PGR042G2003' => 'pgr', 'PGR042G3929' => 'pgr', 'PGR083G1137' => 'pgr', 'PGR083G1364' => 'pgr', 'PGSC0003DMG400003381' => 'stu', 'PGSC0003DMG400003417' => 'stu', 'PGSC0003DMG400008981' => 'stu', 'PGSC0003DMG400012417' => 'stu', 'PGSC0003DMG400012823' => 'stu', 'PGSC0003DMG400016885' => 'stu', 'PGSC0003DMG400022812' => 'stu', 'PGSC0003DMG400029726' => 'stu', 'PGSC0003DMG401009243' => 'stu', 'PGSC0003DMG401031505' => 'stu', 'PGSC0003DMG402031505' => 'stu', 'Phvul.001G017600' => 'pvu', 'Phvul.002G193500' => 'pvu', 'Phvul.002G228900' => 'pvu', 'Phvul.002G236800' => 'pvu', 'Phvul.003G049500' => 'pvu', 'Phvul.005G072000' => 'pvu', 'Phvul.006G164800' => 'pvu', 'Phvul.006G185100' => 'pvu', 'Phvul.007G090000' => 'pvu', 'Potri.001G399800' => 'ptr', 'Potri.002G149900' => 'ptr', 'Potri.004G044100' => 'ptr', 'Potri.004G177600' => 'ptr', 'Potri.009G138000' => 'ptr', 'Potri.010G094000' => 'ptr', 'Potri.011G053000' => 'ptr', 'Potri.011G119300' => 'ptr', 'Potri.013G113700' => 'ptr', 'Potri.018G107800' => 'ptr', 'Potri.019G084100' => 'ptr', 'Pp3c14_23720' => 'ppa', 'Pp3c16_6340' => 'ppa', 'Pp3c23_13420' => 'ppa', 'Pp3c24_2740' => 'ppa', 'Pp3c25_860' => 'ppa', 'Pp3c8_21750' => 'ppa', 'Prupe.1G273000' => 'ppe', 'Prupe.1G273700' => 'ppe', 'Prupe.1G274100' => 'ppe', 'Prupe.2G023300' => 'ppe', 'Prupe.4G048000' => 'ppe', 'Prupe.4G080400' => 'ppe', 'Prupe.4G181200' => 'ppe', 'Prupe.8G056900' => 'ppe', 'Prupe.8G168700' => 'ppe', 'Psat1g189080' => 'psa', 'Psat1g204760' => 'psa', 'Psat4g175560' => 'psa', 'Psat4g177720' => 'psa', 'Psat5g244240' => 'psa', 'Psat6g010720' => 'psa', 'Psat6g187200' => 'psa', 'Psat7g072040' => 'psa', 'PSO017G3501' => 'pso', 'PSO063G2148' => 'pso', 'PSO063G5608' => 'pso', 'PSO210G6392' => 'pso', 'PSO541G2319' => 'pso', 'PSO541G2836' => 'pso', 'PSO541G4012' => 'pso', 'PSO541G6253' => 'pso', 'PSO675G0580' => 'pso', 'PSO675G0856' => 'pso', 'PSO675G5635' => 'pso', 'PSO675G9157' => 'pso', 'PSO832G1660' => 'pso', 'PSO832G1969' => 'pso', 'QL02p007186' => 'qlo', 'QL02p033904' => 'qlo', 'QL03p064391' => 'qlo', 'QL05p040593' => 'qlo', 'QL05p058242' => 'qlo', 'QL08p021825' => 'qlo', 'QL11p004981' => 'qlo', 'RcHm_v2.0_Chr1g0318301' => 'rch', 'RcHm_v2.0_Chr4g0418501' => 'rch', 'RcHm_v2.0_Chr4g0439971' => 'rch', 'RcHm_v2.0_Chr5g0008541' => 'rch', 'RcHm_v2.0_Chr5g0014101' => 'rch', 'RcHm_v2.0_Chr5g0014131' => 'rch', 'RcHm_v2.0_Chr5g0033621' => 'rch', 'RcHm_v2.0_Chr6g0272041' => 'rch', 'RcHm_v2.0_Chr6g0278831' => 'rch', 'Rhsim02G0130400' => 'rsi', 'Rhsim02G0171100' => 'rsi', 'Rhsim05G0053000' => 'rsi', 'Rhsim05G0053100' => 'rsi', 'Rhsim06G0096500' => 'rsi', 'Rhsim06G0096600' => 'rsi', 'Rhsim06G0199100' => 'rsi', 'Rhsim12G0062300' => 'rsi', 'Rhsim12G0062800' => 'rsi', 'Sabra02G0118600' => 'sbr', 'Sabra04G0027300' => 'sbr', 'Sabra04G0119500' => 'sbr', 'Sabra08G0112500' => 'sbr', 'Sabra11G0036800' => 'sbr', 'Sabra11G0103800' => 'sbr', 'Sabra13G0096300' => 'sbr', 'Sabra16G0262300' => 'sbr', 'Sabra18G0091700' => 'sbr', 'Sabra19G0095400' => 'sbr', 'SalBow6G3080' => 'sbo', 'SalBow7G1157' => 'sbo', 'SalBow7G2123' => 'sbo', 'SalBow7G2285' => 'sbo', 'SalBow7G3537' => 'sbo', 'SalBow8G2947' => 'sbo', 'SalBow8G4463' => 'sbo', 'SalBow8G5466' => 'sbo', 'Sc01g0001750' => 'sci', 'Sc02g0006640' => 'sci', 'Sc02g0006670' => 'sci', 'Sc04g0008220' => 'sci', 'Sc05g0006190' => 'sci', 'Sc08g0002760' => 'sci', 'Sc17g0006170' => 'sci', 'Sc22g0002050' => 'sci', 'Sc23g0001190' => 'sci', 'Sc24g0000980' => 'sci', 'Sed0006245' => 'sed', 'Sed0007543' => 'sed', 'Sed0009411' => 'sed', 'Sed0010765' => 'sed', 'Sed0012944' => 'sed', 'Sed0014682' => 'sed', 'Sed0016174' => 'sed', 'Sed0016796' => 'sed', 'Sed0020317' => 'sed', 'Sed0021467' => 'sed', 'SEGI_01316' => 'sgi', 'SEGI_03374' => 'sgi', 'SEGI_16265' => 'sgi', 'SEGI_18569' => 'sgi', 'SEGI_20351' => 'sgi', 'SEGI_26395' => 'sgi', 'SEGI_29469' => 'sgi', 'SEGI_34771' => 'sgi', 'SEGI_36769' => 'sgi', 'SEGI_37139' => 'sgi', 'SGA_v2.0_scaffold100G29687' => 'sas', 'SGA_v2.0_scaffold118G32472' => 'sas', 'SGA_v2.0_scaffold14G07051' => 'sas', 'SGA_v2.0_scaffold183G39845' => 'sas', 'SGA_v2.0_scaffold1G00174' => 'sas', 'SGA_v2.0_scaffold22G09714' => 'sas', 'SGA_v2.0_scaffold333G48992' => 'sas', 'SGA_v2.0_scaffold46G17491' => 'sas', 'SGA_v2.0_scaffold49G18294' => 'sas', 'SGA_v2.0_scaffold63G21658' => 'sas', 'SHI01741' => 'shi', 'SHI05771' => 'shi', 'SHI18077' => 'shi', 'SHI20525' => 'shi', 'SHI20527' => 'shi', 'SHI20528' => 'shi', 'SMO172G0185' => 'smo', 'SMO198G0020' => 'smo', 'SMO351G0006' => 'smo', 'SMO356G0118' => 'smo', 'SMO358G0296' => 'smo', 'SMO367G0079' => 'smo', 'SMO367G1277' => 'smo', 'Solyc01g014220.3' => 'sly', 'Solyc01g111770.2' => 'sly', 'Solyc02g078180.3' => 'sly', 'Solyc03g006430.3' => 'sly', 'Solyc03g006456.1' => 'sly', 'Solyc03g079860.2' => 'sly', 'Solyc04g079770.3' => 'sly', 'Solyc05g007430.4' => 'sly', 'Solyc07g063150.3' => 'sly', 'Solyc08g016620.3' => 'sly', 'Solyc09g057590.3' => 'sly', 'Solyc09g057600.1' => 'sly', 'Solyc10g009050.3' => 'sly', 'Solyc11g017420.2' => 'sly', 'Sopen01g053810' => 'spe', 'Sopen02g023040' => 'spe', 'Sopen03g002440' => 'spe', 'Sopen04g033350' => 'spe', 'Sopen05g003310' => 'spe', 'Sopen07g004050' => 'spe', 'Sopen07g031340' => 'spe', 'Sopen08g006990' => 'spe', 'Sopen10g004830' => 'spe', 'Sopen11g009370' => 'spe', 'Sp1g24450' => 'spa', 'Sp1g29670' => 'spa', 'Sp1g39600' => 'spa', 'Sp2g11080' => 'spa', 'Sp2g13970' => 'spa', 'Sp4g16130' => 'spa', 'Sp6g13080' => 'spa', 'Sp7g37270' => 'spa', 'TAR371G0065' => 'tar', 'TAR376G0340' => 'tar', 'TAR376G0435' => 'tar', 'TAR381G0002' => 'tar', 'TAR381G1236' => 'tar', 'TAR624G0055' => 'tar', 'TAR624G0324' => 'tar', 'TAR624G0696' => 'tar', 'TAR624G0906' => 'tar', 'TAR625G0107' => 'tar', 'TAR626G0015' => 'tar', 'TAR626G1356' => 'tar', 'TAR627G0888' => 'tar', 'TAR628G0399' => 'tar', 'TAR628G1327' => 'tar', 'TAR629G2831' => 'tar', 'TAR629G2874' => 'tar', 'TAR633G1432' => 'tar', 'TAR633G2771' => 'tar', 'THA.LOC104803394' => 'tha', 'THA.LOC104805153' => 'tha', 'THA.LOC104806784' => 'tha', 'THA.LOC104810473' => 'tha', 'THA.LOC104813100' => 'tha', 'THA.LOC104814215' => 'tha', 'THA.LOC104815554' => 'tha', 'THA.LOC104820544' => 'tha', 'THA.LOC104824754' => 'tha', 'THA.LOC104827717' => 'tha', 'Thecc.02G031400' => 'tca', 'Thecc.02G055900' => 'tca', 'Thecc.02G350800' => 'tca', 'Thecc.06G150900' => 'tca', 'Thecc.06G186600' => 'tca', 'Thecc.07G089600' => 'tca', 'Thecc.08G020400' => 'tca', 'Thecc.08G182100' => 'tca', 'Thhalv10000873m.g' => 'esa', 'Thhalv10004185m.g' => 'esa', 'Thhalv10006981m.g' => 'esa', 'Thhalv10007204m.g' => 'esa', 'Thhalv10011374m.g' => 'esa', 'Thhalv10013482m.g' => 'esa', 'Thhalv10017801m.g' => 'esa', 'Thhalv10024983m.g' => 'esa', 'TPR.G12072' => 'tpr', 'TPR.G15769' => 'tpr', 'TPR.G16504' => 'tpr', 'TPR.G16506' => 'tpr', 'TPR.G24345' => 'tpr', 'TPR.G26666' => 'tpr', 'TPR.G27320' => 'tpr', 'TPR.G31819' => 'tpr', 'TPR.G38879' => 'tpr', 'TPR.G39015' => 'tpr', 'TPR.G8819' => 'tpr', 'TWI09G0924' => 'twi', 'TWI12G0811' => 'twi', 'TWI12G1294' => 'twi', 'TWI31G0150' => 'twi', 'TWI36G1262' => 'twi', 'TWI38G1287' => 'twi', 'TWI38G1633' => 'twi', 'TWI38G1982' => 'twi', 'TWI39G0116' => 'twi', 'TWI60G1011' => 'twi', 'TWI63G0171' => 'twi', 'TWI73G0839' => 'twi', 'TWI79G1511' => 'twi', 'unitig_0.g915' => 'ugi', 'unitig_0.g916' => 'ugi', 'unitig_21.g20219' => 'ugi', 'unitig_21.g20416' => 'ugi', 'unitig_578.g16132' => 'ugi', 'unitig_578.g16718' => 'ugi', 'unitig_62.g23481' => 'ugi', 'unitig_744.g24535' => 'ugi', 'unitig_749.g13525' => 'ugi', 'vmacro01248' => 'vma', 'vmacro02290' => 'vma', 'vmacro10946' => 'vma', 'vmacro11865' => 'vma', 'vmacro12493' => 'vma', 'vmacro17322' => 'vma', 'vmacro21599' => 'vma', 'vmacro23041' => 'vma', 'VMungo0251G0004' => 'vmu', 'VMungo0251G2639' => 'vmu', 'VMungo0251G2967' => 'vmu', 'VMungo0540G0864' => 'vmu', 'VMungo0540G1569' => 'vmu', 'VMungo0647G0317' => 'vmu', 'VMungo0720G1373' => 'vmu', 'VMungo0720G1508' => 'vmu', 'VMungo1080G0485' => 'vmu', 'VMungo1215G3177' => 'vmu', 'Zm00001eb112600' => 'zma', 'Zm00001eb120220' => 'zma', 'Zm00001eb153240' => 'zma', 'Zm00001eb168880' => 'zma', 'Zm00001eb213920' => 'zma', 'Zm00001eb228280' => 'zma', 'Zm00001eb254580' => 'zma', 'Zm00001eb272180' => 'zma', 'Zm00001eb293190' => 'zma', 'Zm00001eb322930' => 'zma', 'Zm00001eb353360' => 'zma', 'Zm00001eb353390' => 'zma', 'Zm00001eb353430' => 'zma', 'Zm00001eb353440' => 'zma', 'Zm00001eb353780' => 'zma' ) $gf_id = 'HOM05D000499' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000499' ) $data_identifier = 'HOM05D000499' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 29, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 12, 'amhyb' => (int) 8, 'aly' => (int) 12, 'aox' => (int) 9, 'arhy' => (int) 26, 'ath' => (int) 8, 'atr' => (int) 7, 'acertr' => (int) 10, 'cqu' => (int) 15, 'bca' => (int) 29, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 11, 'cansat' => (int) 8, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 9, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 8, 'cpa' => (int) 10, 'csa' => (int) 7, 'camsi' => (int) 20, 'dca' => (int) 8, 'din' => (int) 12, 'dzi' => (int) 14, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 6, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 38, 'gra' => (int) 16, 'vvi' => (int) 8, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 5, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 11, 'lja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 11, 'mpo' => (int) 3, 'mbi' => (int) 14, 'mdo' => (int) 14, 'mtr' => (int) 8, 'cme' => (int) 9, 'egut' => (int) 9, 'ama' => (int) 11, 'nta' => (int) 17, 'nnu' => (int) 11, 'oeu' => (int) 18, 'osa' => (int) 8, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 6, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 9, 'rsi' => (int) 9, 'sbr' => (int) 10, 'sbo' => (int) 8, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 10, 'sas' => (int) 10, 'shi' => (int) 6, 'smo' => (int) 7, 'sly' => (int) 14, 'spe' => (int) 10, 'spa' => (int) 8, 'tar' => (int) 19, 'tha' => (int) 10, 'tca' => (int) 8, 'esa' => (int) 8, 'tpr' => (int) 11, 'twi' => (int) 13, 'ugi' => (int) 9, 'vma' => (int) 8, 'vmu' => (int) 10, 'zma' => (int) 15 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb353780' $species_info = array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ) $local_species = 'bol' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000499', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1066', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p29780' => 'bna', 'A02p33180' => 'bna', 'A03p16470' => 'bna', 'A03p66010' => 'bna', 'A04p25970' => 'bna', 'A06p01270' => 'bna', 'A06p46080' => 'bna', 'A07p11400' => 'bna', 'A08p01840' => 'bna', 'A08p08230' => 'bna', 'A08p25740' => 'bna', 'A09p32070' => 'bna', 'A09p37830' => 'bna', 'A09p42840' => 'bna', 'A09p42850' => 'bna', 'Aa31LG10G2060' => 'aar', 'Aa31LG2G7410' => 'aar', 'Aa31LG6G10200' => 'aar', 'Aa31LG6G16680' => 'aar', 'Aa31LG6G8470' => 'aar', 'Aa31LG9G12730' => 'aar', 'Aa31LG9G13680' => 'aar', 'Aa31LG9G14920' => 'aar', 'Aa31LG9G6650' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4977' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5467' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3254' => 'aag', 'Actinidia02578' => 'ach', 'Actinidia07693' => 'ach', 'Actinidia08413' => 'ach', 'Actinidia08414' => 'ach', 'Actinidia15289' => 'ach', 'Actinidia19871' => 'ach', 'Actinidia21475' => 'ach', 'Actinidia22576' => 'ach', 'Actinidia28327' => 'ach', 'Actinidia32491' => 'ach', 'Actinidia39463' => 'ach', 'Actinidia39571' => 'ach', 'Ah.01g013750' => 'amhyb', 'Ah.01g023210' => 'amhyb', 'Ah.04g164850' => 'amhyb', 'Ah.05g178060' => 'amhyb', 'Ah.07g204270' => 'amhyb', 'Ah.07g208480' => 'amhyb', 'Ah.09g237410' => 'amhyb', 'Ah.14g089460' => 'amhyb', 'AL1G41790' => 'aly', 'AL1G49050' => 'aly', 'AL1G53810' => 'aly', 'AL1G61400' => 'aly', 'AL4G18580' => 'aly', 'AL5G12510' => 'aly', 'AL5G12540' => 'aly', 'AL6G43230' => 'aly', 'AL7G10370' => 'aly', 'AL7G19250' => 'aly', 'AL8G12240' => 'aly', 'AL8G18540' => 'aly', 'Aqoxy1G02409' => 'aox', 'Aqoxy2G03993' => 'aox', 'Aqoxy3G03357' => 'aox', 'Aqoxy4G00785' => 'aox', 'Aqoxy5G02598' => 'aox', 'Aqoxy6G00132' => 'aox', 'Aqoxy7G01776' => 'aox', 'Aqoxy7G02316' => 'aox', 'Aqoxy7G03973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.12AFKW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B8730' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27IQR1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3F75VG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3RE0GA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41TCQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.527VTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FIR39' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5W8UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DA38EV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ63HS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H1I32C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HC27T5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4M8AP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7N3CZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9UVDZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LS1NQA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT1D4B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SKC4TM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCFV76' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF9Q1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQWD9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1ZM88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WE07RT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YCK7VH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJE6Q6' => 'arhy', 'AT1G28240' => 'ath', 'AT1G34550' => 'ath', 'AT1G53040' => 'ath', 'AT2G02910' => 'ath', 'AT4G09630' => 'ath', 'AT4G38500' => 'ath', 'AT5G42660' => 'ath', 'AT5G46220' => 'ath', 'ATR0152G026' => 'atr', 'ATR0564G343' => 'atr', 'ATR0706G151' => 'atr', 'ATR0733G207' => 'atr', 'ATR0751G234' => 'atr', 'ATR0807G048' => 'atr', 'ATR1091G084' => 'atr', 'Atru.chr10.1229' => 'acertr', 'Atru.chr10.1230' => 'acertr', 'Atru.chr10.1874' => 'acertr', 'Atru.chr11.1808' => 'acertr', 'Atru.chr13.1795' => 'acertr', 'Atru.chr13.570' => 'acertr', 'Atru.chr2.2608' => 'acertr', 'Atru.chr2.2609' => 'acertr', 'Atru.chr5.3428' => 'acertr', 'Atru.chr8.1171' => 'acertr', 'AUR62004651' => 'cqu', 'AUR62008675' => 'cqu', 'AUR62010014' => 'cqu', 'AUR62013004' => 'cqu', 'AUR62014825' => 'cqu', 'AUR62015015' => 'cqu', 'AUR62015151' => 'cqu', 'AUR62017020' => 'cqu', 'AUR62019422' => 'cqu', 'AUR62023570' => 'cqu', 'AUR62025571' => 'cqu', 'AUR62029098' => 'cqu', 'AUR62033863' => 'cqu', 'AUR62034296' => 'cqu', 'AUR62040075' => 'cqu', 'BcaB02g07334' => 'bca', 'BcaB02g10575' => 'bca', 'BcaB03g12119' => 'bca', 'BcaB03g12120' => 'bca', 'BcaB03g13945' => 'bca', 'BcaB04g17123' => 'bca', 'BcaB04g17867' => 'bca', 'BcaB04g19839' => 'bca', 'BcaB07g30317' => 'bca', 'BcaB07g32432' => 'bca', 'BcaB07g33362' => 'bca', 'BcaB08g36611' => 'bca', 'BcaC01g00028' => 'bca', 'BcaC01g01356' => 'bca', 'BcaC01g02034' => 'bca', 'BcaC01g06051' => 'bca', 'BcaC03g16839' => 'bca', 'BcaC03g17176' => 'bca', 'BcaC05g26829' => 'bca', 'BcaC06g31490' => 'bca', 'BcaC06g35344' => 'bca', 'BcaC06g36570' => 'bca', 'BcaC07g37537' => 'bca', 'BcaC08g43491' => 'bca', 'BcaC08g43773' => 'bca', 'BcaNung00234' => 'bca', 'BcaNung01982' => 'bca', 'BcaNung03707' => 'bca', 'BcaNung06454' => 'bca', 'BolC2t10762H' => 'bol', 'BolC2t11191H' => 'bol', 'BolC3t14322H' => 'bol', 'BolC3t19747H' => 'bol', 'BolC3t21425H' => 'bol', 'BolC4t27800H' => 'bol', 'BolC5t31423H' => 'bol', 'BolC6t35951H' => 'bol', 'BolC6t36282H' => 'bol', 'BolC7t40678H' => 'bol', 'BolC7t40679H' => 'bol', 'BolC7t42222H' => 'bol', 'BolC7t43492H' => 'bol', 'BolC7t46785H' => 'bol', 'BolC8t47853H' => 'bol', 'BolC9t56805H' => 'bol', 'BraA02t08000Z' => 'bra', 'BraA02t08341Z' => 'bra', 'BraA03t10936Z' => 'bra', 'BraA03t15657Z' => 'bra', 'BraA04t18100Z' => 'bra', 'BraA05t20523Z' => 'bra', 'BraA06t23353Z' => 'bra', 'BraA06t27473Z' => 'bra', 'BraA06t27769Z' => 'bra', 'BraA07t28928Z' => 'bra', 'BraA08t32236Z' => 'bra', 'BraA08t32841Z' => 'bra', 'BraA08t34524Z' => 'bra', 'BraA09t38742Z' => 'bra', 'BraA09t39295Z' => 'bra', 'C02p47180' => 'bna', 'C02p50990' => 'bna', 'C03p19360' => 'bna', 'C03p74950' => 'bna', 'C03p91000' => 'bna', 'C04p63260' => 'bna', 'C05p27050' => 'bna', 'C06p08750' => 'bna', 'C06p11490' => 'bna', 'C07p02820' => 'bna', 'C07p17180' => 'bna', 'C07p29440' => 'bna', 'C07p63730' => 'bna', 'C09p39260' => 'bna', 'CAN.G1164.34' => 'can', 'CAN.G1164.39' => 'can', 'CAN.G1530.3' => 'can', 'CAN.G162.61' => 'can', 'CAN.G176.6' => 'can', 'CAN.G289.49' => 'can', 'CAN.G370.21' => 'can', 'CAN.G370.22' => 'can', 'CAN.G371.117' => 'can', 'CAN.G58.37' => 'can', 'CAN.G588.98' => 'can', 'CANSAT21G2266' => 'cansat', 'CANSAT25G2799' => 'cansat', 'CANSAT35G0862' => 'cansat', 'CANSAT35G1704' => 'cansat', 'CANSAT35G1760' => 'cansat', 'CANSAT56G3971' => 'cansat', 'CANSAT56G4116' => 'cansat', 'CANSAT80G1259' => 'cansat', 'CARHR027730' => 'chi', 'CARHR033880' => 'chi', 'CARHR043270' => 'chi', 'CARHR145330' => 'chi', 'CARHR145340' => 'chi', 'CARHR175570' => 'chi', 'CARHR181570' => 'chi', 'CARHR258470' => 'chi', 'CARHR260490' => 'chi', 'CARHR294220' => 'chi', 'Carub.0001s2668' => 'cru', 'Carub.0001s3257' => 'cru', 'Carub.0001s4220' => 'cru', 'Carub.0005s0179' => 'cru', 'Carub.0006s2807' => 'cru', 'Carub.0007s0039' => 'cru', 'Carub.0008s0169' => 'cru', 'Carub.0008s0636' => 'cru', 'Ca_00338_v3' => 'car', 'Ca_00542_v3' => 'car', 'Ca_01844_v3' => 'car', 'Ca_10611_v3' => 'car', 'Ca_13326_v3' => 'car', 'Ca_17944_v3' => 'car', 'Ca_18546_v3' => 'car', 'Ca_24219_v3' => 'car', 'Ca_29972_v3' => 'car', 'CBR_g3681' => 'cbr', 'CBR_g40021' => 'cbr', 'Cc01_g08140' => 'ccan', 'Cc02_g13410' => 'ccan', 'Cc02_g37480' => 'ccan', 'Cc05_g12030' => 'ccan', 'Cc09_g03370' => 'ccan', 'Cc09_g10300' => 'ccan', 'Cc10_g03530' => 'ccan', 'Cc10_g11380' => 'ccan', 'CDE01G0176' => 'cde', 'CDE02G0675' => 'cde', 'CDE02G0942' => 'cde', 'CDE02G1153' => 'cde', 'CDE02G4177' => 'cde', 'CDE04G2117' => 'cde', 'CDE04G2736' => 'cde', 'CDE08G1161' => 'cde', 'CDE09G1238' => 'cde', 'Cfa000467' => 'cfa', 'Cfa000947' => 'cfa', 'Cfa004969' => 'cfa', 'Cfa005284' => 'cfa', 'Cfa008993' => 'cfa', 'Cfa018187' => 'cfa', 'Cfa018454' => 'cfa', 'Cfa020585' => 'cfa', 'Ciclev10000424m.g' => 'ccl', 'Ciclev10003605m.g' => 'ccl', 'Ciclev10007828m.g' => 'ccl', 'Ciclev10014620m.g' => 'ccl', 'Ciclev10015169m.g' => 'ccl', 'Ciclev10018291m.g' => 'ccl', 'Ciclev10028256m.g' => 'ccl', 'Ciclev10033822m.g' => 'ccl', 'CiPaw.05G060300' => 'cil', 'CiPaw.05G085000' => 'cil', 'CiPaw.06G083700' => 'cil', 'CiPaw.06G120300' => 'cil', 'CiPaw.09G060500' => 'cil', 'CiPaw.09G123800' => 'cil', 'CiPaw.11G169700' => 'cil', 'CiPaw.12G118300' => 'cil', 'CiPaw.15G071000' => 'cil', 'CiPaw.15G081900' => 'cil', 'ClCG01G024610' => 'cla', 'ClCG03G006070' => 'cla', 'ClCG05G019250' => 'cla', 'ClCG09G009500' => 'cla', 'ClCG11G008200' => 'cla', 'ClCG11G018080' => 'cla', 'COL.COLO4_17373' => 'col', 'COL.COLO4_22994' => 'col', 'COL.COLO4_26389' => 'col', 'COL.COLO4_27170' => 'col', 'COL.COLO4_31074' => 'col', 'COL.COLO4_31465' => 'col', 'COL.COLO4_36438' => 'col', 'COL.COLO4_36439' => 'col', 'Cpa.g.c38781' => 'cpa', 'Cpa.g.sc128.12' => 'cpa', 'Cpa.g.sc166.7' => 'cpa', 'Cpa.g.sc166.8' => 'cpa', 'Cpa.g.sc20.111' => 'cpa', 'Cpa.g.sc27.31' => 'cpa', 'Cpa.g.sc64.36' => 'cpa', 'Cpa.g.sc64.37' => 'cpa', 'Cpa.g.sc66.49' => 'cpa', 'Cpa.g.sc80.64' => 'cpa', 'CsaV3_1G012320' => 'csa', 'CsaV3_2G008480' => 'csa', 'CsaV3_2G033450' => 'csa', 'CsaV3_3G044830' => 'csa', 'CsaV3_4G033710' => 'csa', 'CsaV3_6G051730' => 'csa', 'CsaV3_7G025350' => 'csa', 'CSS0001067' => 'camsi', 'CSS0005996' => 'camsi', 'CSS0006590' => 'camsi', 'CSS0009673' => 'camsi', 'CSS0010201' => 'camsi', 'CSS0010549' => 'camsi', 'CSS0011364' => 'camsi', 'CSS0014473' => 'camsi', 'CSS0014961' => 'camsi', 'CSS0020191' => 'camsi', 'CSS0021165' => 'camsi', 'CSS0022306' => 'camsi', 'CSS0030591' => 'camsi', 'CSS0030696' => 'camsi', 'CSS0032653' => 'camsi', 'CSS0037487' => 'camsi', 'CSS0041102' => 'camsi', 'CSS0041261' => 'camsi', 'CSS0046246' => 'camsi', 'CSS0049256' => 'camsi', 'DCAR_004075' => 'dca', 'DCAR_011538' => 'dca', 'DCAR_019553' => 'dca', 'DCAR_020952' => 'dca', 'DCAR_021739' => 'dca', 'DCAR_027407' => 'dca', 'DCAR_027913' => 'dca', 'DCAR_028066' => 'dca', 'Dinv05899' => 'din', 'Dinv07563' => 'din', 'Dinv08010' => 'din', 'Dinv14125' => 'din', 'Dinv20172' => 'din', 'Dinv30743' => 'din', 'Dinv31229' => 'din', 'Dinv34162' => 'din', 'Dinv36028' => 'din', 'Dinv39368' => 'din', 'Dinv40565' => 'din', 'Dinv41706' => 'din', 'Duzib052G0089' => 'dzi', 'Duzib116G0641' => 'dzi', 'Duzib132G0069' => 'dzi', 'Duzib132G1219' => 'dzi', 'Duzib147G0278' => 'dzi', 'Duzib160G0480' => 'dzi', 'Duzib170G0661' => 'dzi', 'Duzib177G0591' => 'dzi', 'Duzib187G1353' => 'dzi', 'Duzib192G0858' => 'dzi', 'Duzib192G0883' => 'dzi', 'Duzib213G0506' => 'dzi', 'Duzib235G0289' => 'dzi', 'Duzib251G0422' => 'dzi', 'ECA232G3898' => 'eca', 'ECA233G5950' => 'eca', 'ECA234G1699' => 'eca', 'ECA234G2421' => 'eca', 'ECA236G0426' => 'eca', 'ECA236G4331' => 'eca', 'ECA248G2573' => 'eca', 'EL10Ac1g00077' => 'bvu', 'EL10Ac1g01746' => 'bvu', 'EL10Ac2g03464' => 'bvu', 'EL10Ac4g08176' => 'bvu', 'EL10Ac7g17521' => 'bvu', 'EL10Ac8g20386' => 'bvu', 'EL10Ac9g21343' => 'bvu', 'EL10Ac9g22688' => 'bvu', 'Eucgr.B03434' => 'egr', 'Eucgr.D00618' => 'egr', 'Eucgr.E02395' => 'egr', 'Eucgr.F01129' => 'egr', 'Eucgr.F02622' => 'egr', 'Eucgr.F04207' => 'egr', 'FAN01G0570' => 'fan', 'FAN03G3351' => 'fan', 'FAN06G3702' => 'fan', 'FAN07G2149' => 'fan', 'FAN10G3758' => 'fan', 'FAN11G1170' => 'fan', 'FAN11G2050' => 'fan', 'FAN11G2724' => 'fan', 'FAN12G1700' => 'fan', 'FAN12G2028' => 'fan', 'FAN15G1160' => 'fan', 'FAN15G3063' => 'fan', 'FAN16G2540' => 'fan', 'FAN16G3077' => 'fan', 'FAN16G3624' => 'fan', 'FAN17G0221' => 'fan', 'FAN20G2492' => 'fan', 'FAN20G2905' => 'fan', 'FAN21G0548' => 'fan', 'FAN21G1300' => 'fan', 'FAN22G0077' => 'fan', 'FAN22G1315' => 'fan', 'FAN24G1280' => 'fan', 'FAN24G1445' => 'fan', 'FAN24G3527' => 'fan', 'FAN25G0464' => 'fan', 'FAN25G2885' => 'fan', 'FAN25G3270' => 'fan', 'FAN27G1101' => 'fan', 'FAN27G2846' => 'fan', 'FAN27G3524' => 'fan', 'FvH4_2g11770' => 'fve', 'FvH4_2g15630' => 'fve', 'FvH4_3g05570' => 'fve', 'FvH4_3g09110' => 'fve', 'FvH4_3g19940' => 'fve', 'FvH4_4g04821' => 'fve', 'FvH4_4g31480' => 'fve', 'FvH4_7g01740' => 'fve', 'Glyma.05G130400' => 'gma', 'Glyma.05G156400' => 'gma', 'Glyma.07G197000' => 'gma', 'Glyma.08G085151' => 'gma', 'Glyma.08G114500' => 'gma', 'Glyma.08G300400' => 'gma', 'Glyma.10G215800' => 'gma', 'Glyma.12G224400' => 'gma', 'Glyma.13G179300' => 'gma', 'Glyma.13G218151' => 'gma', 'Glyma.13G238800' => 'gma', 'Glyma.13G276900' => 'gma', 'Glyma.14G078200' => 'gma', 'Glyma.15G074500' => 'gma', 'Glyma.15G094100' => 'gma', 'Glyma.17G247200' => 'gma', 'Glyma.18G120100' => 'gma', 'Glyma.20G176000' => 'gma', 'Gohir.A01G063600' => 'ghi', 'Gohir.A01G170301' => 'ghi', 'Gohir.A02G060500' => 'ghi', 'Gohir.A05G133850' => 'ghi', 'Gohir.A05G161400' => 'ghi', 'Gohir.A06G012900' => 'ghi', 'Gohir.A06G035901' => 'ghi', 'Gohir.A06G127100' => 'ghi', 'Gohir.A06G210500' => 'ghi', 'Gohir.A08G008650' => 'ghi', 'Gohir.A09G072700' => 'ghi', 'Gohir.A09G088301' => 'ghi', 'Gohir.A10G040600' => 'ghi', 'Gohir.A12G036300' => 'ghi', 'Gohir.A12G143350' => 'ghi', 'Gohir.A12G165500' => 'ghi', 'Gohir.A13G145700' => 'ghi', 'Gohir.D01G050000' => 'ghi', 'Gohir.D01G051366' => 'ghi', 'Gohir.D01G161350' => 'ghi', 'Gohir.D02G065900' => 'ghi', 'Gohir.D05G164200' => 'ghi', 'Gohir.D05G355500' => 'ghi', 'Gohir.D06G010400' => 'ghi', 'Gohir.D06G111250' => 'ghi', 'Gohir.D06G132000' => 'ghi', 'Gohir.D06G210500' => 'ghi', 'Gohir.D07G165675' => 'ghi', 'Gohir.D08G062240' => 'ghi', 'Gohir.D08G086101' => 'ghi', 'Gohir.D08G138060' => 'ghi', 'Gohir.D09G072300' => 'ghi', 'Gohir.D10G041400' => 'ghi', 'Gohir.D11G191020' => 'ghi', 'Gohir.D11G212066' => 'ghi', 'Gohir.D12G036300' => 'ghi', 'Gohir.D12G168600' => 'ghi', 'Gohir.D13G150600' => 'ghi', 'Gorai.001G057300' => 'gra', 'Gorai.002G069900' => 'gra', 'Gorai.002G200000' => 'gra', 'Gorai.003G067600' => 'gra', 'Gorai.005G074800' => 'gra', 'Gorai.006G087300' => 'gra', 'Gorai.008G037500' => 'gra', 'Gorai.008G181400' => 'gra', 'Gorai.009G169400' => 'gra', 'Gorai.009G387900' => 'gra', 'Gorai.010G013300' => 'gra', 'Gorai.010G153800' => 'gra', 'Gorai.010G255800' => 'gra', 'Gorai.011G043700' => 'gra', 'Gorai.011G198900' => 'gra', 'Gorai.013G168400' => 'gra', 'GSVIVG01005212001' => 'vvi', 'GSVIVG01006163001' => 'vvi', 'GSVIVG01009625001' => 'vvi', 'GSVIVG01014338001' => 'vvi', 'GSVIVG01020005001' => 'vvi', 'GSVIVG01021450001' => 'vvi', 'GSVIVG01023975001' => 'vvi', 'GSVIVG01034490001' => 'vvi', 'HanXRQChr04g0112071' => 'han', 'HanXRQChr05g0131151' => 'han', 'HanXRQChr09g0262371' => 'han', 'HanXRQChr09g0268401' => 'han', 'HanXRQChr10g0279241' => 'han', 'HanXRQChr10g0297961' => 'han', 'HanXRQChr11g0326231' => 'han', 'HanXRQChr11g0328471' => 'han', 'HanXRQChr16g0507941' => 'han', 'HanXRQChr17g0560211' => 'han', 'Haze_02108' => 'cav', 'Haze_02428' => 'cav', 'Haze_05593' => 'cav', 'Haze_06448' => 'cav', 'Haze_09427' => 'cav', 'Haze_12022' => 'cav', 'Haze_17612' => 'cav', 'Haze_17928' => 'cav', 'Hma1.2p1_0032F.1_g019250' => 'hma', 'Hma1.2p1_0163F.1_g072690' => 'hma', 'Hma1.2p1_0265F.1_g106710' => 'hma', 'Hma1.2p1_0286F.1_g113970' => 'hma', 'Hma1.2p1_0363F.1_g136640' => 'hma', 'Hma1.2p1_0584F.1_g183470' => 'hma', 'Hma1.2p1_0885F.1_g232570' => 'hma', 'HPP92_006022' => 'vpl', 'HPP92_007320' => 'vpl', 'HPP92_011521' => 'vpl', 'HPP92_019387' => 'vpl', 'HPP92_024038' => 'vpl', 'Hund05891' => 'sun', 'Hund06450' => 'sun', 'Hund12053' => 'sun', 'Hund16800' => 'sun', 'Hund21222' => 'sun', 'Hund22896' => 'sun', 'Hund23746' => 'sun', 'Hund27083' => 'sun', 'Lalb_Chr02g0141831' => 'lal', 'Lalb_Chr02g0141841' => 'lal', 'Lalb_Chr05g0220411' => 'lal', 'Lalb_Chr06g0162081' => 'lal', 'Lalb_Chr09g0327651' => 'lal', 'Lalb_Chr13g0295051' => 'lal', 'Lalb_Chr15g0086801' => 'lal', 'Lalb_Chr16g0383781' => 'lal', 'Lalb_Chr16g0383791' => 'lal', 'Lalb_Chr18g0055441' => 'lal', 'Lalb_Chr18g0059611' => 'lal', 'Lalb_Chr20g0109661' => 'lal', 'Lalb_Chr20g0109831' => 'lal', 'Lalb_Chr20g0121871' => 'lal', 'Lalb_Chr22g0355361' => 'lal', 'Lalb_Chr25g0286371' => 'lal', 'Lj1A1187G43' => 'lonja', 'Lj1A1205T50' => 'lonja', 'Lj1A800G33' => 'lonja', 'Lj1C1187T7' => 'lonja', 'Lj1C843T11' => 'lonja', 'Lj1g0010940' => 'lja', 'Lj2A288T69' => 'lonja', 'Lj3g0024276' => 'lja', 'Lj4A47T76' => 'lonja', 'Lj4g0005805' => 'lja', 'Lj4g0006097' => 'lja', 'Lj4g0008528' => 'lja', 'Lj4g0024907' => 'lja', 'Lj5g0012472' => 'lja', 'Lj5g0018648' => 'lja', 'Lj6C789G1' => 'lonja', 'Lj6g0004000' => 'lja', 'Lj7A292G67' => 'lonja', 'Lj7A292T64' => 'lonja', 'Lj9A400T58' => 'lonja', 'Lsat_1_v5_gn_1_126181' => 'lsa', 'Lsat_1_v5_gn_4_123041' => 'lsa', 'Lsat_1_v5_gn_4_133620' => 'lsa', 'Lsat_1_v5_gn_4_53221' => 'lsa', 'Lsat_1_v5_gn_4_71961' => 'lsa', 'Lsat_1_v5_gn_7_105241' => 'lsa', 'Lsat_1_v5_gn_7_21361' => 'lsa', 'Lsat_1_v5_gn_7_28860' => 'lsa', 'Lsat_1_v5_gn_7_31260' => 'lsa', 'Lsat_1_v5_gn_8_52801' => 'lsa', 'Manes.02G191400' => 'mes', 'Manes.03G110100' => 'mes', 'Manes.04G071100' => 'mes', 'Manes.05G100500' => 'mes', 'Manes.05G164700' => 'mes', 'Manes.15G087000' => 'mes', 'Manes.15G121500' => 'mes', 'Manes.16G028300' => 'mes', 'Manes.17G046100' => 'mes', 'Manes.17G069800' => 'mes', 'Manes.18G100500' => 'mes', 'Mapoly0002s0109' => 'mpo', 'Mapoly0024s0007' => 'mpo', 'Mapoly0089s0032' => 'mpo', 'MBI04_g42241_MAGBIO' => 'mbi', 'MBI05_g11988_MAGBIO' => 'mbi', 'MBI05_g35452_MAGBIO' => 'mbi', 'MBI07_g30179_MAGBIO' => 'mbi', 'MBI07_g35859_MAGBIO' => 'mbi', 'MBI07_g35860_MAGBIO' => 'mbi', 'MBI07_g37166_MAGBIO' => 'mbi', 'MBI08_g18172_MAGBIO' => 'mbi', 'MBI09_g08441_MAGBIO' => 'mbi', 'MBI13_g01676_MAGBIO' => 'mbi', 'MBI14_g42955_MAGBIO' => 'mbi', 'MBI16_g13161_MAGBIO' => 'mbi', 'MBI17_g27204_MAGBIO' => 'mbi', 'MBI19_g21595_MAGBIO' => 'mbi', 'MD00G1148400' => 'mdo', 'MD02G1301200' => 'mdo', 'MD03G1227800' => 'mdo', 'MD05G1041100' => 'mdo', 'MD05G1124800' => 'mdo', 'MD05G1284000' => 'mdo', 'MD05G1338800' => 'mdo', 'MD05G1338900' => 'mdo', 'MD07G1022800' => 'mdo', 'MD10G1047500' => 'mdo', 'MD10G1127500' => 'mdo', 'MD10G1262300' => 'mdo', 'MD10G1293800' => 'mdo', 'MD16G1074300' => 'mdo', 'Medtr1g021670' => 'mtr', 'Medtr1g096320' => 'mtr', 'Medtr2g013690' => 'mtr', 'Medtr2g019450' => 'mtr', 'Medtr2g085170' => 'mtr', 'Medtr4g088785' => 'mtr', 'Medtr8g055930' => 'mtr', 'Medtr8g085850' => 'mtr', 'MELO3C002605.2' => 'cme', 'MELO3C003891.2' => 'cme', 'MELO3C004012.2' => 'cme', 'MELO3C007134.2' => 'cme', 'MELO3C008118.2' => 'cme', 'MELO3C016700.2' => 'cme', 'MELO3C024127.2' => 'cme', 'MELO3C033361.2' => 'cme', 'MELO3C033362.2' => 'cme', 'Migut.C00430' => 'egut', 'Migut.C01246' => 'egut', 'Migut.E00101' => 'egut', 'Migut.H01486' => 'egut', 'Migut.H01939' => 'egut', 'Migut.K00360' => 'egut', 'Migut.M00910' => 'egut', 'Migut.M01139' => 'egut', 'Migut.N02677' => 'egut', 'MSTRG.13252' => 'ama', 'MSTRG.14701' => 'ama', 'MSTRG.1521' => 'ama', 'MSTRG.15884' => 'ama', 'MSTRG.16242' => 'ama', 'MSTRG.22285' => 'ama', 'MSTRG.22444' => 'ama', 'MSTRG.2349' => 'ama', 'MSTRG.26308' => 'ama', 'MSTRG.28296' => 'ama', 'MSTRG.9895' => 'ama', 'Nitab4.5_0000110g0060' => 'nta', 'Nitab4.5_0000420g0130' => 'nta', 'Nitab4.5_0000422g0030' => 'nta', 'Nitab4.5_0000560g0180' => 'nta', 'Nitab4.5_0000703g0100' => 'nta', 'Nitab4.5_0000786g0200' => 'nta', 'Nitab4.5_0001336g0020' => 'nta', 'Nitab4.5_0001796g0030' => 'nta', 'Nitab4.5_0003348g0060' => 'nta', 'Nitab4.5_0003698g0040' => 'nta', 'Nitab4.5_0003942g0090' => 'nta', 'Nitab4.5_0004775g0070' => 'nta', 'Nitab4.5_0004864g0030' => 'nta', 'Nitab4.5_0005615g0020' => 'nta', 'Nitab4.5_0009288g0030' => 'nta', 'Nitab4.5_0009341g0010' => 'nta', 'Nitab4.5_0009535g0010' => 'nta', 'Nn1g03995' => 'nnu', 'Nn1g04100' => 'nnu', 'Nn1g06530' => 'nnu', 'Nn3g16404' => 'nnu', 'Nn3g17212' => 'nnu', 'Nn3g20776' => 'nnu', 'Nn3g21923' => 'nnu', 'Nn5g27737' => 'nnu', 'Nn5g29461' => 'nnu', 'Nn7g38355' => 'nnu', 'Nn8g39873' => 'nnu', 'Oeu000548.2' => 'oeu', 'Oeu004672.1' => 'oeu', 'Oeu015605.2' => 'oeu', 'Oeu016092.1' => 'oeu', 'Oeu017879.3' => 'oeu', 'Oeu024910.1' => 'oeu', 'Oeu028965.1' => 'oeu', 'Oeu031269.1' => 'oeu', 'Oeu031270.1' => 'oeu', 'Oeu032535.1' => 'oeu', 'Oeu034151.1' => 'oeu', 'Oeu034152.1' => 'oeu', 'Oeu034588.2' => 'oeu', 'Oeu050846.1' => 'oeu', 'Oeu050849.2' => 'oeu', 'Oeu051063.2' => 'oeu', 'Oeu052368.1' => 'oeu', 'Oeu052370.1' => 'oeu', 'Os01g0210400' => 'osa', 'Os01g0304300' => 'osa', 'Os01g0749100' => 'osa', 'Os02g0745800' => 'osa', 'Os03g0769050' => 'osa', 'Os05g0531500' => 'osa', 'Os06g0724300' => 'osa', 'Os11g0198100' => 'osa', 'Peaxi162Scf00069g01425' => 'pax', 'Peaxi162Scf00280g00811' => 'pax', 'Peaxi162Scf00310g00615' => 'pax', 'Peaxi162Scf00362g00542' => 'pax', 'Peaxi162Scf00461g00310' => 'pax', 'Peaxi162Scf00530g00118' => 'pax', 'Peaxi162Scf00541g00057' => 'pax', 'Peaxi162Scf00661g00017' => 'pax', 'Peaxi162Scf00926g00027' => 'pax', 'Peaxi162Scf01064g00263' => 'pax', 'Peaxi162Scf01211g00135' => 'pax', 'PGR004G2336' => 'pgr', 'PGR042G0327' => 'pgr', 'PGR042G1957' => 'pgr', 'PGR042G2003' => 'pgr', 'PGR042G3929' => 'pgr', 'PGR083G1137' => 'pgr', 'PGR083G1364' => 'pgr', 'PGSC0003DMG400003381' => 'stu', 'PGSC0003DMG400003417' => 'stu', 'PGSC0003DMG400008981' => 'stu', 'PGSC0003DMG400012417' => 'stu', 'PGSC0003DMG400012823' => 'stu', 'PGSC0003DMG400016885' => 'stu', 'PGSC0003DMG400022812' => 'stu', 'PGSC0003DMG400029726' => 'stu', 'PGSC0003DMG401009243' => 'stu', 'PGSC0003DMG401031505' => 'stu', 'PGSC0003DMG402031505' => 'stu', 'Phvul.001G017600' => 'pvu', 'Phvul.002G193500' => 'pvu', 'Phvul.002G228900' => 'pvu', 'Phvul.002G236800' => 'pvu', 'Phvul.003G049500' => 'pvu', 'Phvul.005G072000' => 'pvu', 'Phvul.006G164800' => 'pvu', 'Phvul.006G185100' => 'pvu', 'Phvul.007G090000' => 'pvu', 'Potri.001G399800' => 'ptr', 'Potri.002G149900' => 'ptr', 'Potri.004G044100' => 'ptr', 'Potri.004G177600' => 'ptr', 'Potri.009G138000' => 'ptr', 'Potri.010G094000' => 'ptr', 'Potri.011G053000' => 'ptr', 'Potri.011G119300' => 'ptr', 'Potri.013G113700' => 'ptr', 'Potri.018G107800' => 'ptr', 'Potri.019G084100' => 'ptr', 'Pp3c14_23720' => 'ppa', 'Pp3c16_6340' => 'ppa', 'Pp3c23_13420' => 'ppa', 'Pp3c24_2740' => 'ppa', 'Pp3c25_860' => 'ppa', 'Pp3c8_21750' => 'ppa', 'Prupe.1G273000' => 'ppe', 'Prupe.1G273700' => 'ppe', 'Prupe.1G274100' => 'ppe', 'Prupe.2G023300' => 'ppe', 'Prupe.4G048000' => 'ppe', 'Prupe.4G080400' => 'ppe', 'Prupe.4G181200' => 'ppe', 'Prupe.8G056900' => 'ppe', 'Prupe.8G168700' => 'ppe', 'Psat1g189080' => 'psa', 'Psat1g204760' => 'psa', 'Psat4g175560' => 'psa', 'Psat4g177720' => 'psa', 'Psat5g244240' => 'psa', 'Psat6g010720' => 'psa', 'Psat6g187200' => 'psa', 'Psat7g072040' => 'psa', 'PSO017G3501' => 'pso', 'PSO063G2148' => 'pso', 'PSO063G5608' => 'pso', 'PSO210G6392' => 'pso', 'PSO541G2319' => 'pso', 'PSO541G2836' => 'pso', 'PSO541G4012' => 'pso', 'PSO541G6253' => 'pso', 'PSO675G0580' => 'pso', 'PSO675G0856' => 'pso', 'PSO675G5635' => 'pso', 'PSO675G9157' => 'pso', 'PSO832G1660' => 'pso', 'PSO832G1969' => 'pso', 'QL02p007186' => 'qlo', 'QL02p033904' => 'qlo', 'QL03p064391' => 'qlo', 'QL05p040593' => 'qlo', 'QL05p058242' => 'qlo', 'QL08p021825' => 'qlo', 'QL11p004981' => 'qlo', 'RcHm_v2.0_Chr1g0318301' => 'rch', 'RcHm_v2.0_Chr4g0418501' => 'rch', 'RcHm_v2.0_Chr4g0439971' => 'rch', 'RcHm_v2.0_Chr5g0008541' => 'rch', 'RcHm_v2.0_Chr5g0014101' => 'rch', 'RcHm_v2.0_Chr5g0014131' => 'rch', 'RcHm_v2.0_Chr5g0033621' => 'rch', 'RcHm_v2.0_Chr6g0272041' => 'rch', 'RcHm_v2.0_Chr6g0278831' => 'rch', 'Rhsim02G0130400' => 'rsi', 'Rhsim02G0171100' => 'rsi', 'Rhsim05G0053000' => 'rsi', 'Rhsim05G0053100' => 'rsi', 'Rhsim06G0096500' => 'rsi', 'Rhsim06G0096600' => 'rsi', 'Rhsim06G0199100' => 'rsi', 'Rhsim12G0062300' => 'rsi', 'Rhsim12G0062800' => 'rsi', 'Sabra02G0118600' => 'sbr', 'Sabra04G0027300' => 'sbr', 'Sabra04G0119500' => 'sbr', 'Sabra08G0112500' => 'sbr', 'Sabra11G0036800' => 'sbr', 'Sabra11G0103800' => 'sbr', 'Sabra13G0096300' => 'sbr', 'Sabra16G0262300' => 'sbr', 'Sabra18G0091700' => 'sbr', 'Sabra19G0095400' => 'sbr', 'SalBow6G3080' => 'sbo', 'SalBow7G1157' => 'sbo', 'SalBow7G2123' => 'sbo', 'SalBow7G2285' => 'sbo', 'SalBow7G3537' => 'sbo', 'SalBow8G2947' => 'sbo', 'SalBow8G4463' => 'sbo', 'SalBow8G5466' => 'sbo', 'Sc01g0001750' => 'sci', 'Sc02g0006640' => 'sci', 'Sc02g0006670' => 'sci', 'Sc04g0008220' => 'sci', 'Sc05g0006190' => 'sci', 'Sc08g0002760' => 'sci', 'Sc17g0006170' => 'sci', 'Sc22g0002050' => 'sci', 'Sc23g0001190' => 'sci', 'Sc24g0000980' => 'sci', 'Sed0006245' => 'sed', 'Sed0007543' => 'sed', 'Sed0009411' => 'sed', 'Sed0010765' => 'sed', 'Sed0012944' => 'sed', 'Sed0014682' => 'sed', 'Sed0016174' => 'sed', 'Sed0016796' => 'sed', 'Sed0020317' => 'sed', 'Sed0021467' => 'sed', 'SEGI_01316' => 'sgi', 'SEGI_03374' => 'sgi', 'SEGI_16265' => 'sgi', 'SEGI_18569' => 'sgi', 'SEGI_20351' => 'sgi', 'SEGI_26395' => 'sgi', 'SEGI_29469' => 'sgi', 'SEGI_34771' => 'sgi', 'SEGI_36769' => 'sgi', 'SEGI_37139' => 'sgi', 'SGA_v2.0_scaffold100G29687' => 'sas', 'SGA_v2.0_scaffold118G32472' => 'sas', 'SGA_v2.0_scaffold14G07051' => 'sas', 'SGA_v2.0_scaffold183G39845' => 'sas', 'SGA_v2.0_scaffold1G00174' => 'sas', 'SGA_v2.0_scaffold22G09714' => 'sas', 'SGA_v2.0_scaffold333G48992' => 'sas', 'SGA_v2.0_scaffold46G17491' => 'sas', 'SGA_v2.0_scaffold49G18294' => 'sas', 'SGA_v2.0_scaffold63G21658' => 'sas', 'SHI01741' => 'shi', 'SHI05771' => 'shi', 'SHI18077' => 'shi', 'SHI20525' => 'shi', 'SHI20527' => 'shi', 'SHI20528' => 'shi', 'SMO172G0185' => 'smo', 'SMO198G0020' => 'smo', 'SMO351G0006' => 'smo', 'SMO356G0118' => 'smo', 'SMO358G0296' => 'smo', 'SMO367G0079' => 'smo', 'SMO367G1277' => 'smo', 'Solyc01g014220.3' => 'sly', 'Solyc01g111770.2' => 'sly', 'Solyc02g078180.3' => 'sly', 'Solyc03g006430.3' => 'sly', 'Solyc03g006456.1' => 'sly', 'Solyc03g079860.2' => 'sly', 'Solyc04g079770.3' => 'sly', 'Solyc05g007430.4' => 'sly', 'Solyc07g063150.3' => 'sly', 'Solyc08g016620.3' => 'sly', 'Solyc09g057590.3' => 'sly', 'Solyc09g057600.1' => 'sly', 'Solyc10g009050.3' => 'sly', 'Solyc11g017420.2' => 'sly', 'Sopen01g053810' => 'spe', 'Sopen02g023040' => 'spe', 'Sopen03g002440' => 'spe', 'Sopen04g033350' => 'spe', 'Sopen05g003310' => 'spe', 'Sopen07g004050' => 'spe', 'Sopen07g031340' => 'spe', 'Sopen08g006990' => 'spe', 'Sopen10g004830' => 'spe', 'Sopen11g009370' => 'spe', 'Sp1g24450' => 'spa', 'Sp1g29670' => 'spa', 'Sp1g39600' => 'spa', 'Sp2g11080' => 'spa', 'Sp2g13970' => 'spa', 'Sp4g16130' => 'spa', 'Sp6g13080' => 'spa', 'Sp7g37270' => 'spa', 'TAR371G0065' => 'tar', 'TAR376G0340' => 'tar', 'TAR376G0435' => 'tar', 'TAR381G0002' => 'tar', 'TAR381G1236' => 'tar', 'TAR624G0055' => 'tar', 'TAR624G0324' => 'tar', 'TAR624G0696' => 'tar', 'TAR624G0906' => 'tar', 'TAR625G0107' => 'tar', 'TAR626G0015' => 'tar', 'TAR626G1356' => 'tar', 'TAR627G0888' => 'tar', 'TAR628G0399' => 'tar', 'TAR628G1327' => 'tar', 'TAR629G2831' => 'tar', 'TAR629G2874' => 'tar', 'TAR633G1432' => 'tar', 'TAR633G2771' => 'tar', 'THA.LOC104803394' => 'tha', 'THA.LOC104805153' => 'tha', 'THA.LOC104806784' => 'tha', 'THA.LOC104810473' => 'tha', 'THA.LOC104813100' => 'tha', 'THA.LOC104814215' => 'tha', 'THA.LOC104815554' => 'tha', 'THA.LOC104820544' => 'tha', 'THA.LOC104824754' => 'tha', 'THA.LOC104827717' => 'tha', 'Thecc.02G031400' => 'tca', 'Thecc.02G055900' => 'tca', 'Thecc.02G350800' => 'tca', 'Thecc.06G150900' => 'tca', 'Thecc.06G186600' => 'tca', 'Thecc.07G089600' => 'tca', 'Thecc.08G020400' => 'tca', 'Thecc.08G182100' => 'tca', 'Thhalv10000873m.g' => 'esa', 'Thhalv10004185m.g' => 'esa', 'Thhalv10006981m.g' => 'esa', 'Thhalv10007204m.g' => 'esa', 'Thhalv10011374m.g' => 'esa', 'Thhalv10013482m.g' => 'esa', 'Thhalv10017801m.g' => 'esa', 'Thhalv10024983m.g' => 'esa', 'TPR.G12072' => 'tpr', 'TPR.G15769' => 'tpr', 'TPR.G16504' => 'tpr', 'TPR.G16506' => 'tpr', 'TPR.G24345' => 'tpr', 'TPR.G26666' => 'tpr', 'TPR.G27320' => 'tpr', 'TPR.G31819' => 'tpr', 'TPR.G38879' => 'tpr', 'TPR.G39015' => 'tpr', 'TPR.G8819' => 'tpr', 'TWI09G0924' => 'twi', 'TWI12G0811' => 'twi', 'TWI12G1294' => 'twi', 'TWI31G0150' => 'twi', 'TWI36G1262' => 'twi', 'TWI38G1287' => 'twi', 'TWI38G1633' => 'twi', 'TWI38G1982' => 'twi', 'TWI39G0116' => 'twi', 'TWI60G1011' => 'twi', 'TWI63G0171' => 'twi', 'TWI73G0839' => 'twi', 'TWI79G1511' => 'twi', 'unitig_0.g915' => 'ugi', 'unitig_0.g916' => 'ugi', 'unitig_21.g20219' => 'ugi', 'unitig_21.g20416' => 'ugi', 'unitig_578.g16132' => 'ugi', 'unitig_578.g16718' => 'ugi', 'unitig_62.g23481' => 'ugi', 'unitig_744.g24535' => 'ugi', 'unitig_749.g13525' => 'ugi', 'vmacro01248' => 'vma', 'vmacro02290' => 'vma', 'vmacro10946' => 'vma', 'vmacro11865' => 'vma', 'vmacro12493' => 'vma', 'vmacro17322' => 'vma', 'vmacro21599' => 'vma', 'vmacro23041' => 'vma', 'VMungo0251G0004' => 'vmu', 'VMungo0251G2639' => 'vmu', 'VMungo0251G2967' => 'vmu', 'VMungo0540G0864' => 'vmu', 'VMungo0540G1569' => 'vmu', 'VMungo0647G0317' => 'vmu', 'VMungo0720G1373' => 'vmu', 'VMungo0720G1508' => 'vmu', 'VMungo1080G0485' => 'vmu', 'VMungo1215G3177' => 'vmu', 'Zm00001eb112600' => 'zma', 'Zm00001eb120220' => 'zma', 'Zm00001eb153240' => 'zma', 'Zm00001eb168880' => 'zma', 'Zm00001eb213920' => 'zma', 'Zm00001eb228280' => 'zma', 'Zm00001eb254580' => 'zma', 'Zm00001eb272180' => 'zma', 'Zm00001eb293190' => 'zma', 'Zm00001eb322930' => 'zma', 'Zm00001eb353360' => 'zma', 'Zm00001eb353390' => 'zma', 'Zm00001eb353430' => 'zma', 'Zm00001eb353440' => 'zma', 'Zm00001eb353780' => 'zma' ), 'gf_id' => 'HOM05D000499', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000499' ), 'data_identifier' => 'HOM05D000499', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000499', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1066', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p29780' => 'bna', 'A02p33180' => 'bna', 'A03p16470' => 'bna', 'A03p66010' => 'bna', 'A04p25970' => 'bna', 'A06p01270' => 'bna', 'A06p46080' => 'bna', 'A07p11400' => 'bna', 'A08p01840' => 'bna', 'A08p08230' => 'bna', 'A08p25740' => 'bna', 'A09p32070' => 'bna', 'A09p37830' => 'bna', 'A09p42840' => 'bna', 'A09p42850' => 'bna', 'Aa31LG10G2060' => 'aar', 'Aa31LG2G7410' => 'aar', 'Aa31LG6G10200' => 'aar', 'Aa31LG6G16680' => 'aar', 'Aa31LG6G8470' => 'aar', 'Aa31LG9G12730' => 'aar', 'Aa31LG9G13680' => 'aar', 'Aa31LG9G14920' => 'aar', 'Aa31LG9G6650' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4977' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5467' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3254' => 'aag', 'Actinidia02578' => 'ach', 'Actinidia07693' => 'ach', 'Actinidia08413' => 'ach', 'Actinidia08414' => 'ach', 'Actinidia15289' => 'ach', 'Actinidia19871' => 'ach', 'Actinidia21475' => 'ach', 'Actinidia22576' => 'ach', 'Actinidia28327' => 'ach', 'Actinidia32491' => 'ach', 'Actinidia39463' => 'ach', 'Actinidia39571' => 'ach', 'Ah.01g013750' => 'amhyb', 'Ah.01g023210' => 'amhyb', 'Ah.04g164850' => 'amhyb', 'Ah.05g178060' => 'amhyb', 'Ah.07g204270' => 'amhyb', 'Ah.07g208480' => 'amhyb', 'Ah.09g237410' => 'amhyb', 'Ah.14g089460' => 'amhyb', 'AL1G41790' => 'aly', 'AL1G49050' => 'aly', 'AL1G53810' => 'aly', 'AL1G61400' => 'aly', 'AL4G18580' => 'aly', 'AL5G12510' => 'aly', 'AL5G12540' => 'aly', 'AL6G43230' => 'aly', 'AL7G10370' => 'aly', 'AL7G19250' => 'aly', 'AL8G12240' => 'aly', 'AL8G18540' => 'aly', 'Aqoxy1G02409' => 'aox', 'Aqoxy2G03993' => 'aox', 'Aqoxy3G03357' => 'aox', 'Aqoxy4G00785' => 'aox', 'Aqoxy5G02598' => 'aox', 'Aqoxy6G00132' => 'aox', 'Aqoxy7G01776' => 'aox', 'Aqoxy7G02316' => 'aox', 'Aqoxy7G03973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.12AFKW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B8730' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27IQR1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3F75VG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3RE0GA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41TCQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.527VTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FIR39' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5W8UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DA38EV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ63HS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H1I32C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HC27T5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4M8AP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7N3CZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9UVDZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LS1NQA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT1D4B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SKC4TM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCFV76' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF9Q1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQWD9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1ZM88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WE07RT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YCK7VH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJE6Q6' => 'arhy', 'AT1G28240' => 'ath', 'AT1G34550' => 'ath', 'AT1G53040' => 'ath', 'AT2G02910' => 'ath', 'AT4G09630' => 'ath', 'AT4G38500' => 'ath', 'AT5G42660' => 'ath', 'AT5G46220' => 'ath', 'ATR0152G026' => 'atr', 'ATR0564G343' => 'atr', 'ATR0706G151' => 'atr', 'ATR0733G207' => 'atr', 'ATR0751G234' => 'atr', 'ATR0807G048' => 'atr', 'ATR1091G084' => 'atr', 'Atru.chr10.1229' => 'acertr', 'Atru.chr10.1230' => 'acertr', 'Atru.chr10.1874' => 'acertr', 'Atru.chr11.1808' => 'acertr', 'Atru.chr13.1795' => 'acertr', 'Atru.chr13.570' => 'acertr', 'Atru.chr2.2608' => 'acertr', 'Atru.chr2.2609' => 'acertr', 'Atru.chr5.3428' => 'acertr', 'Atru.chr8.1171' => 'acertr', 'AUR62004651' => 'cqu', 'AUR62008675' => 'cqu', 'AUR62010014' => 'cqu', 'AUR62013004' => 'cqu', 'AUR62014825' => 'cqu', 'AUR62015015' => 'cqu', 'AUR62015151' => 'cqu', 'AUR62017020' => 'cqu', 'AUR62019422' => 'cqu', 'AUR62023570' => 'cqu', 'AUR62025571' => 'cqu', 'AUR62029098' => 'cqu', 'AUR62033863' => 'cqu', 'AUR62034296' => 'cqu', 'AUR62040075' => 'cqu', 'BcaB02g07334' => 'bca', 'BcaB02g10575' => 'bca', 'BcaB03g12119' => 'bca', 'BcaB03g12120' => 'bca', 'BcaB03g13945' => 'bca', 'BcaB04g17123' => 'bca', 'BcaB04g17867' => 'bca', 'BcaB04g19839' => 'bca', 'BcaB07g30317' => 'bca', 'BcaB07g32432' => 'bca', 'BcaB07g33362' => 'bca', 'BcaB08g36611' => 'bca', 'BcaC01g00028' => 'bca', 'BcaC01g01356' => 'bca', 'BcaC01g02034' => 'bca', 'BcaC01g06051' => 'bca', 'BcaC03g16839' => 'bca', 'BcaC03g17176' => 'bca', 'BcaC05g26829' => 'bca', 'BcaC06g31490' => 'bca', 'BcaC06g35344' => 'bca', 'BcaC06g36570' => 'bca', 'BcaC07g37537' => 'bca', 'BcaC08g43491' => 'bca', 'BcaC08g43773' => 'bca', 'BcaNung00234' => 'bca', 'BcaNung01982' => 'bca', 'BcaNung03707' => 'bca', 'BcaNung06454' => 'bca', 'BolC2t10762H' => 'bol', 'BolC2t11191H' => 'bol', 'BolC3t14322H' => 'bol', 'BolC3t19747H' => 'bol', 'BolC3t21425H' => 'bol', 'BolC4t27800H' => 'bol', 'BolC5t31423H' => 'bol', 'BolC6t35951H' => 'bol', 'BolC6t36282H' => 'bol', 'BolC7t40678H' => 'bol', 'BolC7t40679H' => 'bol', 'BolC7t42222H' => 'bol', 'BolC7t43492H' => 'bol', 'BolC7t46785H' => 'bol', 'BolC8t47853H' => 'bol', 'BolC9t56805H' => 'bol', 'BraA02t08000Z' => 'bra', 'BraA02t08341Z' => 'bra', 'BraA03t10936Z' => 'bra', 'BraA03t15657Z' => 'bra', 'BraA04t18100Z' => 'bra', 'BraA05t20523Z' => 'bra', 'BraA06t23353Z' => 'bra', 'BraA06t27473Z' => 'bra', 'BraA06t27769Z' => 'bra', 'BraA07t28928Z' => 'bra', 'BraA08t32236Z' => 'bra', 'BraA08t32841Z' => 'bra', 'BraA08t34524Z' => 'bra', 'BraA09t38742Z' => 'bra', 'BraA09t39295Z' => 'bra', 'C02p47180' => 'bna', 'C02p50990' => 'bna', 'C03p19360' => 'bna', 'C03p74950' => 'bna', 'C03p91000' => 'bna', 'C04p63260' => 'bna', 'C05p27050' => 'bna', 'C06p08750' => 'bna', 'C06p11490' => 'bna', 'C07p02820' => 'bna', 'C07p17180' => 'bna', 'C07p29440' => 'bna', 'C07p63730' => 'bna', 'C09p39260' => 'bna', 'CAN.G1164.34' => 'can', 'CAN.G1164.39' => 'can', 'CAN.G1530.3' => 'can', 'CAN.G162.61' => 'can', 'CAN.G176.6' => 'can', 'CAN.G289.49' => 'can', 'CAN.G370.21' => 'can', 'CAN.G370.22' => 'can', 'CAN.G371.117' => 'can', 'CAN.G58.37' => 'can', 'CAN.G588.98' => 'can', 'CANSAT21G2266' => 'cansat', 'CANSAT25G2799' => 'cansat', 'CANSAT35G0862' => 'cansat', 'CANSAT35G1704' => 'cansat', 'CANSAT35G1760' => 'cansat', 'CANSAT56G3971' => 'cansat', 'CANSAT56G4116' => 'cansat', 'CANSAT80G1259' => 'cansat', 'CARHR027730' => 'chi', 'CARHR033880' => 'chi', 'CARHR043270' => 'chi', 'CARHR145330' => 'chi', 'CARHR145340' => 'chi', 'CARHR175570' => 'chi', 'CARHR181570' => 'chi', 'CARHR258470' => 'chi', 'CARHR260490' => 'chi', 'CARHR294220' => 'chi', 'Carub.0001s2668' => 'cru', 'Carub.0001s3257' => 'cru', 'Carub.0001s4220' => 'cru', 'Carub.0005s0179' => 'cru', 'Carub.0006s2807' => 'cru', 'Carub.0007s0039' => 'cru', 'Carub.0008s0169' => 'cru', 'Carub.0008s0636' => 'cru', 'Ca_00338_v3' => 'car', 'Ca_00542_v3' => 'car', 'Ca_01844_v3' => 'car', 'Ca_10611_v3' => 'car', 'Ca_13326_v3' => 'car', 'Ca_17944_v3' => 'car', 'Ca_18546_v3' => 'car', 'Ca_24219_v3' => 'car', 'Ca_29972_v3' => 'car', 'CBR_g3681' => 'cbr', 'CBR_g40021' => 'cbr', 'Cc01_g08140' => 'ccan', 'Cc02_g13410' => 'ccan', 'Cc02_g37480' => 'ccan', 'Cc05_g12030' => 'ccan', 'Cc09_g03370' => 'ccan', 'Cc09_g10300' => 'ccan', 'Cc10_g03530' => 'ccan', 'Cc10_g11380' => 'ccan', 'CDE01G0176' => 'cde', 'CDE02G0675' => 'cde', 'CDE02G0942' => 'cde', 'CDE02G1153' => 'cde', 'CDE02G4177' => 'cde', 'CDE04G2117' => 'cde', 'CDE04G2736' => 'cde', 'CDE08G1161' => 'cde', 'CDE09G1238' => 'cde', 'Cfa000467' => 'cfa', 'Cfa000947' => 'cfa', 'Cfa004969' => 'cfa', 'Cfa005284' => 'cfa', 'Cfa008993' => 'cfa', 'Cfa018187' => 'cfa', 'Cfa018454' => 'cfa', 'Cfa020585' => 'cfa', 'Ciclev10000424m.g' => 'ccl', 'Ciclev10003605m.g' => 'ccl', 'Ciclev10007828m.g' => 'ccl', 'Ciclev10014620m.g' => 'ccl', 'Ciclev10015169m.g' => 'ccl', 'Ciclev10018291m.g' => 'ccl', 'Ciclev10028256m.g' => 'ccl', 'Ciclev10033822m.g' => 'ccl', 'CiPaw.05G060300' => 'cil', 'CiPaw.05G085000' => 'cil', 'CiPaw.06G083700' => 'cil', 'CiPaw.06G120300' => 'cil', 'CiPaw.09G060500' => 'cil', 'CiPaw.09G123800' => 'cil', 'CiPaw.11G169700' => 'cil', 'CiPaw.12G118300' => 'cil', 'CiPaw.15G071000' => 'cil', 'CiPaw.15G081900' => 'cil', 'ClCG01G024610' => 'cla', 'ClCG03G006070' => 'cla', 'ClCG05G019250' => 'cla', 'ClCG09G009500' => 'cla', 'ClCG11G008200' => 'cla', 'ClCG11G018080' => 'cla', 'COL.COLO4_17373' => 'col', 'COL.COLO4_22994' => 'col', 'COL.COLO4_26389' => 'col', 'COL.COLO4_27170' => 'col', 'COL.COLO4_31074' => 'col', 'COL.COLO4_31465' => 'col', 'COL.COLO4_36438' => 'col', 'COL.COLO4_36439' => 'col', 'Cpa.g.c38781' => 'cpa', 'Cpa.g.sc128.12' => 'cpa', 'Cpa.g.sc166.7' => 'cpa', 'Cpa.g.sc166.8' => 'cpa', 'Cpa.g.sc20.111' => 'cpa', 'Cpa.g.sc27.31' => 'cpa', 'Cpa.g.sc64.36' => 'cpa', 'Cpa.g.sc64.37' => 'cpa', 'Cpa.g.sc66.49' => 'cpa', 'Cpa.g.sc80.64' => 'cpa', 'CsaV3_1G012320' => 'csa', 'CsaV3_2G008480' => 'csa', 'CsaV3_2G033450' => 'csa', 'CsaV3_3G044830' => 'csa', 'CsaV3_4G033710' => 'csa', 'CsaV3_6G051730' => 'csa', 'CsaV3_7G025350' => 'csa', 'CSS0001067' => 'camsi', 'CSS0005996' => 'camsi', 'CSS0006590' => 'camsi', 'CSS0009673' => 'camsi', 'CSS0010201' => 'camsi', 'CSS0010549' => 'camsi', 'CSS0011364' => 'camsi', 'CSS0014473' => 'camsi', 'CSS0014961' => 'camsi', 'CSS0020191' => 'camsi', 'CSS0021165' => 'camsi', 'CSS0022306' => 'camsi', 'CSS0030591' => 'camsi', 'CSS0030696' => 'camsi', 'CSS0032653' => 'camsi', 'CSS0037487' => 'camsi', 'CSS0041102' => 'camsi', 'CSS0041261' => 'camsi', 'CSS0046246' => 'camsi', 'CSS0049256' => 'camsi', 'DCAR_004075' => 'dca', 'DCAR_011538' => 'dca', 'DCAR_019553' => 'dca', 'DCAR_020952' => 'dca', 'DCAR_021739' => 'dca', 'DCAR_027407' => 'dca', 'DCAR_027913' => 'dca', 'DCAR_028066' => 'dca', 'Dinv05899' => 'din', 'Dinv07563' => 'din', 'Dinv08010' => 'din', 'Dinv14125' => 'din', 'Dinv20172' => 'din', 'Dinv30743' => 'din', 'Dinv31229' => 'din', 'Dinv34162' => 'din', 'Dinv36028' => 'din', 'Dinv39368' => 'din', 'Dinv40565' => 'din', 'Dinv41706' => 'din', 'Duzib052G0089' => 'dzi', 'Duzib116G0641' => 'dzi', 'Duzib132G0069' => 'dzi', 'Duzib132G1219' => 'dzi', 'Duzib147G0278' => 'dzi', 'Duzib160G0480' => 'dzi', 'Duzib170G0661' => 'dzi', 'Duzib177G0591' => 'dzi', 'Duzib187G1353' => 'dzi', 'Duzib192G0858' => 'dzi', 'Duzib192G0883' => 'dzi', 'Duzib213G0506' => 'dzi', 'Duzib235G0289' => 'dzi', 'Duzib251G0422' => 'dzi', 'ECA232G3898' => 'eca', 'ECA233G5950' => 'eca', 'ECA234G1699' => 'eca', 'ECA234G2421' => 'eca', 'ECA236G0426' => 'eca', 'ECA236G4331' => 'eca', 'ECA248G2573' => 'eca', 'EL10Ac1g00077' => 'bvu', 'EL10Ac1g01746' => 'bvu', 'EL10Ac2g03464' => 'bvu', 'EL10Ac4g08176' => 'bvu', 'EL10Ac7g17521' => 'bvu', 'EL10Ac8g20386' => 'bvu', 'EL10Ac9g21343' => 'bvu', 'EL10Ac9g22688' => 'bvu', 'Eucgr.B03434' => 'egr', 'Eucgr.D00618' => 'egr', 'Eucgr.E02395' => 'egr', 'Eucgr.F01129' => 'egr', 'Eucgr.F02622' => 'egr', 'Eucgr.F04207' => 'egr', 'FAN01G0570' => 'fan', 'FAN03G3351' => 'fan', 'FAN06G3702' => 'fan', 'FAN07G2149' => 'fan', 'FAN10G3758' => 'fan', 'FAN11G1170' => 'fan', 'FAN11G2050' => 'fan', 'FAN11G2724' => 'fan', 'FAN12G1700' => 'fan', 'FAN12G2028' => 'fan', 'FAN15G1160' => 'fan', 'FAN15G3063' => 'fan', 'FAN16G2540' => 'fan', 'FAN16G3077' => 'fan', 'FAN16G3624' => 'fan', 'FAN17G0221' => 'fan', 'FAN20G2492' => 'fan', 'FAN20G2905' => 'fan', 'FAN21G0548' => 'fan', 'FAN21G1300' => 'fan', 'FAN22G0077' => 'fan', 'FAN22G1315' => 'fan', 'FAN24G1280' => 'fan', 'FAN24G1445' => 'fan', 'FAN24G3527' => 'fan', 'FAN25G0464' => 'fan', 'FAN25G2885' => 'fan', 'FAN25G3270' => 'fan', 'FAN27G1101' => 'fan', 'FAN27G2846' => 'fan', 'FAN27G3524' => 'fan', 'FvH4_2g11770' => 'fve', 'FvH4_2g15630' => 'fve', 'FvH4_3g05570' => 'fve', 'FvH4_3g09110' => 'fve', 'FvH4_3g19940' => 'fve', 'FvH4_4g04821' => 'fve', 'FvH4_4g31480' => 'fve', 'FvH4_7g01740' => 'fve', 'Glyma.05G130400' => 'gma', 'Glyma.05G156400' => 'gma', 'Glyma.07G197000' => 'gma', 'Glyma.08G085151' => 'gma', 'Glyma.08G114500' => 'gma', 'Glyma.08G300400' => 'gma', 'Glyma.10G215800' => 'gma', 'Glyma.12G224400' => 'gma', 'Glyma.13G179300' => 'gma', 'Glyma.13G218151' => 'gma', 'Glyma.13G238800' => 'gma', 'Glyma.13G276900' => 'gma', 'Glyma.14G078200' => 'gma', 'Glyma.15G074500' => 'gma', 'Glyma.15G094100' => 'gma', 'Glyma.17G247200' => 'gma', 'Glyma.18G120100' => 'gma', 'Glyma.20G176000' => 'gma', 'Gohir.A01G063600' => 'ghi', 'Gohir.A01G170301' => 'ghi', 'Gohir.A02G060500' => 'ghi', 'Gohir.A05G133850' => 'ghi', 'Gohir.A05G161400' => 'ghi', 'Gohir.A06G012900' => 'ghi', 'Gohir.A06G035901' => 'ghi', 'Gohir.A06G127100' => 'ghi', 'Gohir.A06G210500' => 'ghi', 'Gohir.A08G008650' => 'ghi', 'Gohir.A09G072700' => 'ghi', 'Gohir.A09G088301' => 'ghi', 'Gohir.A10G040600' => 'ghi', 'Gohir.A12G036300' => 'ghi', 'Gohir.A12G143350' => 'ghi', 'Gohir.A12G165500' => 'ghi', 'Gohir.A13G145700' => 'ghi', 'Gohir.D01G050000' => 'ghi', 'Gohir.D01G051366' => 'ghi', 'Gohir.D01G161350' => 'ghi', 'Gohir.D02G065900' => 'ghi', 'Gohir.D05G164200' => 'ghi', 'Gohir.D05G355500' => 'ghi', 'Gohir.D06G010400' => 'ghi', 'Gohir.D06G111250' => 'ghi', 'Gohir.D06G132000' => 'ghi', 'Gohir.D06G210500' => 'ghi', 'Gohir.D07G165675' => 'ghi', 'Gohir.D08G062240' => 'ghi', 'Gohir.D08G086101' => 'ghi', 'Gohir.D08G138060' => 'ghi', 'Gohir.D09G072300' => 'ghi', 'Gohir.D10G041400' => 'ghi', 'Gohir.D11G191020' => 'ghi', 'Gohir.D11G212066' => 'ghi', 'Gohir.D12G036300' => 'ghi', 'Gohir.D12G168600' => 'ghi', 'Gohir.D13G150600' => 'ghi', 'Gorai.001G057300' => 'gra', 'Gorai.002G069900' => 'gra', 'Gorai.002G200000' => 'gra', 'Gorai.003G067600' => 'gra', 'Gorai.005G074800' => 'gra', 'Gorai.006G087300' => 'gra', 'Gorai.008G037500' => 'gra', 'Gorai.008G181400' => 'gra', 'Gorai.009G169400' => 'gra', 'Gorai.009G387900' => 'gra', 'Gorai.010G013300' => 'gra', 'Gorai.010G153800' => 'gra', 'Gorai.010G255800' => 'gra', 'Gorai.011G043700' => 'gra', 'Gorai.011G198900' => 'gra', 'Gorai.013G168400' => 'gra', 'GSVIVG01005212001' => 'vvi', 'GSVIVG01006163001' => 'vvi', 'GSVIVG01009625001' => 'vvi', 'GSVIVG01014338001' => 'vvi', 'GSVIVG01020005001' => 'vvi', 'GSVIVG01021450001' => 'vvi', 'GSVIVG01023975001' => 'vvi', 'GSVIVG01034490001' => 'vvi', 'HanXRQChr04g0112071' => 'han', 'HanXRQChr05g0131151' => 'han', 'HanXRQChr09g0262371' => 'han', 'HanXRQChr09g0268401' => 'han', 'HanXRQChr10g0279241' => 'han', 'HanXRQChr10g0297961' => 'han', 'HanXRQChr11g0326231' => 'han', 'HanXRQChr11g0328471' => 'han', 'HanXRQChr16g0507941' => 'han', 'HanXRQChr17g0560211' => 'han', 'Haze_02108' => 'cav', 'Haze_02428' => 'cav', 'Haze_05593' => 'cav', 'Haze_06448' => 'cav', 'Haze_09427' => 'cav', 'Haze_12022' => 'cav', 'Haze_17612' => 'cav', 'Haze_17928' => 'cav', 'Hma1.2p1_0032F.1_g019250' => 'hma', 'Hma1.2p1_0163F.1_g072690' => 'hma', 'Hma1.2p1_0265F.1_g106710' => 'hma', 'Hma1.2p1_0286F.1_g113970' => 'hma', 'Hma1.2p1_0363F.1_g136640' => 'hma', 'Hma1.2p1_0584F.1_g183470' => 'hma', 'Hma1.2p1_0885F.1_g232570' => 'hma', 'HPP92_006022' => 'vpl', 'HPP92_007320' => 'vpl', 'HPP92_011521' => 'vpl', 'HPP92_019387' => 'vpl', 'HPP92_024038' => 'vpl', 'Hund05891' => 'sun', 'Hund06450' => 'sun', 'Hund12053' => 'sun', 'Hund16800' => 'sun', 'Hund21222' => 'sun', 'Hund22896' => 'sun', 'Hund23746' => 'sun', 'Hund27083' => 'sun', 'Lalb_Chr02g0141831' => 'lal', 'Lalb_Chr02g0141841' => 'lal', 'Lalb_Chr05g0220411' => 'lal', 'Lalb_Chr06g0162081' => 'lal', 'Lalb_Chr09g0327651' => 'lal', 'Lalb_Chr13g0295051' => 'lal', 'Lalb_Chr15g0086801' => 'lal', 'Lalb_Chr16g0383781' => 'lal', 'Lalb_Chr16g0383791' => 'lal', 'Lalb_Chr18g0055441' => 'lal', 'Lalb_Chr18g0059611' => 'lal', 'Lalb_Chr20g0109661' => 'lal', 'Lalb_Chr20g0109831' => 'lal', 'Lalb_Chr20g0121871' => 'lal', 'Lalb_Chr22g0355361' => 'lal', 'Lalb_Chr25g0286371' => 'lal', 'Lj1A1187G43' => 'lonja', 'Lj1A1205T50' => 'lonja', 'Lj1A800G33' => 'lonja', 'Lj1C1187T7' => 'lonja', 'Lj1C843T11' => 'lonja', 'Lj1g0010940' => 'lja', 'Lj2A288T69' => 'lonja', 'Lj3g0024276' => 'lja', 'Lj4A47T76' => 'lonja', 'Lj4g0005805' => 'lja', 'Lj4g0006097' => 'lja', 'Lj4g0008528' => 'lja', 'Lj4g0024907' => 'lja', 'Lj5g0012472' => 'lja', 'Lj5g0018648' => 'lja', 'Lj6C789G1' => 'lonja', 'Lj6g0004000' => 'lja', 'Lj7A292G67' => 'lonja', 'Lj7A292T64' => 'lonja', 'Lj9A400T58' => 'lonja', 'Lsat_1_v5_gn_1_126181' => 'lsa', 'Lsat_1_v5_gn_4_123041' => 'lsa', 'Lsat_1_v5_gn_4_133620' => 'lsa', 'Lsat_1_v5_gn_4_53221' => 'lsa', 'Lsat_1_v5_gn_4_71961' => 'lsa', 'Lsat_1_v5_gn_7_105241' => 'lsa', 'Lsat_1_v5_gn_7_21361' => 'lsa', 'Lsat_1_v5_gn_7_28860' => 'lsa', 'Lsat_1_v5_gn_7_31260' => 'lsa', 'Lsat_1_v5_gn_8_52801' => 'lsa', 'Manes.02G191400' => 'mes', 'Manes.03G110100' => 'mes', 'Manes.04G071100' => 'mes', 'Manes.05G100500' => 'mes', 'Manes.05G164700' => 'mes', 'Manes.15G087000' => 'mes', 'Manes.15G121500' => 'mes', 'Manes.16G028300' => 'mes', 'Manes.17G046100' => 'mes', 'Manes.17G069800' => 'mes', 'Manes.18G100500' => 'mes', 'Mapoly0002s0109' => 'mpo', 'Mapoly0024s0007' => 'mpo', 'Mapoly0089s0032' => 'mpo', 'MBI04_g42241_MAGBIO' => 'mbi', 'MBI05_g11988_MAGBIO' => 'mbi', 'MBI05_g35452_MAGBIO' => 'mbi', 'MBI07_g30179_MAGBIO' => 'mbi', 'MBI07_g35859_MAGBIO' => 'mbi', 'MBI07_g35860_MAGBIO' => 'mbi', 'MBI07_g37166_MAGBIO' => 'mbi', 'MBI08_g18172_MAGBIO' => 'mbi', 'MBI09_g08441_MAGBIO' => 'mbi', 'MBI13_g01676_MAGBIO' => 'mbi', 'MBI14_g42955_MAGBIO' => 'mbi', 'MBI16_g13161_MAGBIO' => 'mbi', 'MBI17_g27204_MAGBIO' => 'mbi', 'MBI19_g21595_MAGBIO' => 'mbi', 'MD00G1148400' => 'mdo', 'MD02G1301200' => 'mdo', 'MD03G1227800' => 'mdo', 'MD05G1041100' => 'mdo', 'MD05G1124800' => 'mdo', 'MD05G1284000' => 'mdo', 'MD05G1338800' => 'mdo', 'MD05G1338900' => 'mdo', 'MD07G1022800' => 'mdo', 'MD10G1047500' => 'mdo', 'MD10G1127500' => 'mdo', 'MD10G1262300' => 'mdo', 'MD10G1293800' => 'mdo', 'MD16G1074300' => 'mdo', 'Medtr1g021670' => 'mtr', 'Medtr1g096320' => 'mtr', 'Medtr2g013690' => 'mtr', 'Medtr2g019450' => 'mtr', 'Medtr2g085170' => 'mtr', 'Medtr4g088785' => 'mtr', 'Medtr8g055930' => 'mtr', 'Medtr8g085850' => 'mtr', 'MELO3C002605.2' => 'cme', 'MELO3C003891.2' => 'cme', 'MELO3C004012.2' => 'cme', 'MELO3C007134.2' => 'cme', 'MELO3C008118.2' => 'cme', 'MELO3C016700.2' => 'cme', 'MELO3C024127.2' => 'cme', 'MELO3C033361.2' => 'cme', 'MELO3C033362.2' => 'cme', 'Migut.C00430' => 'egut', 'Migut.C01246' => 'egut', 'Migut.E00101' => 'egut', 'Migut.H01486' => 'egut', 'Migut.H01939' => 'egut', 'Migut.K00360' => 'egut', 'Migut.M00910' => 'egut', 'Migut.M01139' => 'egut', 'Migut.N02677' => 'egut', 'MSTRG.13252' => 'ama', 'MSTRG.14701' => 'ama', 'MSTRG.1521' => 'ama', 'MSTRG.15884' => 'ama', 'MSTRG.16242' => 'ama', 'MSTRG.22285' => 'ama', 'MSTRG.22444' => 'ama', 'MSTRG.2349' => 'ama', 'MSTRG.26308' => 'ama', 'MSTRG.28296' => 'ama', 'MSTRG.9895' => 'ama', 'Nitab4.5_0000110g0060' => 'nta', 'Nitab4.5_0000420g0130' => 'nta', 'Nitab4.5_0000422g0030' => 'nta', 'Nitab4.5_0000560g0180' => 'nta', 'Nitab4.5_0000703g0100' => 'nta', 'Nitab4.5_0000786g0200' => 'nta', 'Nitab4.5_0001336g0020' => 'nta', 'Nitab4.5_0001796g0030' => 'nta', 'Nitab4.5_0003348g0060' => 'nta', 'Nitab4.5_0003698g0040' => 'nta', 'Nitab4.5_0003942g0090' => 'nta', 'Nitab4.5_0004775g0070' => 'nta', 'Nitab4.5_0004864g0030' => 'nta', 'Nitab4.5_0005615g0020' => 'nta', 'Nitab4.5_0009288g0030' => 'nta', 'Nitab4.5_0009341g0010' => 'nta', 'Nitab4.5_0009535g0010' => 'nta', 'Nn1g03995' => 'nnu', 'Nn1g04100' => 'nnu', 'Nn1g06530' => 'nnu', 'Nn3g16404' => 'nnu', 'Nn3g17212' => 'nnu', 'Nn3g20776' => 'nnu', 'Nn3g21923' => 'nnu', 'Nn5g27737' => 'nnu', 'Nn5g29461' => 'nnu', 'Nn7g38355' => 'nnu', 'Nn8g39873' => 'nnu', 'Oeu000548.2' => 'oeu', 'Oeu004672.1' => 'oeu', 'Oeu015605.2' => 'oeu', 'Oeu016092.1' => 'oeu', 'Oeu017879.3' => 'oeu', 'Oeu024910.1' => 'oeu', 'Oeu028965.1' => 'oeu', 'Oeu031269.1' => 'oeu', 'Oeu031270.1' => 'oeu', 'Oeu032535.1' => 'oeu', 'Oeu034151.1' => 'oeu', 'Oeu034152.1' => 'oeu', 'Oeu034588.2' => 'oeu', 'Oeu050846.1' => 'oeu', 'Oeu050849.2' => 'oeu', 'Oeu051063.2' => 'oeu', 'Oeu052368.1' => 'oeu', 'Oeu052370.1' => 'oeu', 'Os01g0210400' => 'osa', 'Os01g0304300' => 'osa', 'Os01g0749100' => 'osa', 'Os02g0745800' => 'osa', 'Os03g0769050' => 'osa', 'Os05g0531500' => 'osa', 'Os06g0724300' => 'osa', 'Os11g0198100' => 'osa', 'Peaxi162Scf00069g01425' => 'pax', 'Peaxi162Scf00280g00811' => 'pax', 'Peaxi162Scf00310g00615' => 'pax', 'Peaxi162Scf00362g00542' => 'pax', 'Peaxi162Scf00461g00310' => 'pax', 'Peaxi162Scf00530g00118' => 'pax', 'Peaxi162Scf00541g00057' => 'pax', 'Peaxi162Scf00661g00017' => 'pax', 'Peaxi162Scf00926g00027' => 'pax', 'Peaxi162Scf01064g00263' => 'pax', 'Peaxi162Scf01211g00135' => 'pax', 'PGR004G2336' => 'pgr', 'PGR042G0327' => 'pgr', 'PGR042G1957' => 'pgr', 'PGR042G2003' => 'pgr', 'PGR042G3929' => 'pgr', 'PGR083G1137' => 'pgr', 'PGR083G1364' => 'pgr', 'PGSC0003DMG400003381' => 'stu', 'PGSC0003DMG400003417' => 'stu', 'PGSC0003DMG400008981' => 'stu', 'PGSC0003DMG400012417' => 'stu', 'PGSC0003DMG400012823' => 'stu', 'PGSC0003DMG400016885' => 'stu', 'PGSC0003DMG400022812' => 'stu', 'PGSC0003DMG400029726' => 'stu', 'PGSC0003DMG401009243' => 'stu', 'PGSC0003DMG401031505' => 'stu', 'PGSC0003DMG402031505' => 'stu', 'Phvul.001G017600' => 'pvu', 'Phvul.002G193500' => 'pvu', 'Phvul.002G228900' => 'pvu', 'Phvul.002G236800' => 'pvu', 'Phvul.003G049500' => 'pvu', 'Phvul.005G072000' => 'pvu', 'Phvul.006G164800' => 'pvu', 'Phvul.006G185100' => 'pvu', 'Phvul.007G090000' => 'pvu', 'Potri.001G399800' => 'ptr', 'Potri.002G149900' => 'ptr', 'Potri.004G044100' => 'ptr', 'Potri.004G177600' => 'ptr', 'Potri.009G138000' => 'ptr', 'Potri.010G094000' => 'ptr', 'Potri.011G053000' => 'ptr', 'Potri.011G119300' => 'ptr', 'Potri.013G113700' => 'ptr', 'Potri.018G107800' => 'ptr', 'Potri.019G084100' => 'ptr', 'Pp3c14_23720' => 'ppa', 'Pp3c16_6340' => 'ppa', 'Pp3c23_13420' => 'ppa', 'Pp3c24_2740' => 'ppa', 'Pp3c25_860' => 'ppa', 'Pp3c8_21750' => 'ppa', 'Prupe.1G273000' => 'ppe', 'Prupe.1G273700' => 'ppe', 'Prupe.1G274100' => 'ppe', 'Prupe.2G023300' => 'ppe', 'Prupe.4G048000' => 'ppe', 'Prupe.4G080400' => 'ppe', 'Prupe.4G181200' => 'ppe', 'Prupe.8G056900' => 'ppe', 'Prupe.8G168700' => 'ppe', 'Psat1g189080' => 'psa', 'Psat1g204760' => 'psa', 'Psat4g175560' => 'psa', 'Psat4g177720' => 'psa', 'Psat5g244240' => 'psa', 'Psat6g010720' => 'psa', 'Psat6g187200' => 'psa', 'Psat7g072040' => 'psa', 'PSO017G3501' => 'pso', 'PSO063G2148' => 'pso', 'PSO063G5608' => 'pso', 'PSO210G6392' => 'pso', 'PSO541G2319' => 'pso', 'PSO541G2836' => 'pso', 'PSO541G4012' => 'pso', 'PSO541G6253' => 'pso', 'PSO675G0580' => 'pso', 'PSO675G0856' => 'pso', 'PSO675G5635' => 'pso', 'PSO675G9157' => 'pso', 'PSO832G1660' => 'pso', 'PSO832G1969' => 'pso', 'QL02p007186' => 'qlo', 'QL02p033904' => 'qlo', 'QL03p064391' => 'qlo', 'QL05p040593' => 'qlo', 'QL05p058242' => 'qlo', 'QL08p021825' => 'qlo', 'QL11p004981' => 'qlo', 'RcHm_v2.0_Chr1g0318301' => 'rch', 'RcHm_v2.0_Chr4g0418501' => 'rch', 'RcHm_v2.0_Chr4g0439971' => 'rch', 'RcHm_v2.0_Chr5g0008541' => 'rch', 'RcHm_v2.0_Chr5g0014101' => 'rch', 'RcHm_v2.0_Chr5g0014131' => 'rch', 'RcHm_v2.0_Chr5g0033621' => 'rch', 'RcHm_v2.0_Chr6g0272041' => 'rch', 'RcHm_v2.0_Chr6g0278831' => 'rch', 'Rhsim02G0130400' => 'rsi', 'Rhsim02G0171100' => 'rsi', 'Rhsim05G0053000' => 'rsi', 'Rhsim05G0053100' => 'rsi', 'Rhsim06G0096500' => 'rsi', 'Rhsim06G0096600' => 'rsi', 'Rhsim06G0199100' => 'rsi', 'Rhsim12G0062300' => 'rsi', 'Rhsim12G0062800' => 'rsi', 'Sabra02G0118600' => 'sbr', 'Sabra04G0027300' => 'sbr', 'Sabra04G0119500' => 'sbr', 'Sabra08G0112500' => 'sbr', 'Sabra11G0036800' => 'sbr', 'Sabra11G0103800' => 'sbr', 'Sabra13G0096300' => 'sbr', 'Sabra16G0262300' => 'sbr', 'Sabra18G0091700' => 'sbr', 'Sabra19G0095400' => 'sbr', 'SalBow6G3080' => 'sbo', 'SalBow7G1157' => 'sbo', 'SalBow7G2123' => 'sbo', 'SalBow7G2285' => 'sbo', 'SalBow7G3537' => 'sbo', 'SalBow8G2947' => 'sbo', 'SalBow8G4463' => 'sbo', 'SalBow8G5466' => 'sbo', 'Sc01g0001750' => 'sci', 'Sc02g0006640' => 'sci', 'Sc02g0006670' => 'sci', 'Sc04g0008220' => 'sci', 'Sc05g0006190' => 'sci', 'Sc08g0002760' => 'sci', 'Sc17g0006170' => 'sci', 'Sc22g0002050' => 'sci', 'Sc23g0001190' => 'sci', 'Sc24g0000980' => 'sci', 'Sed0006245' => 'sed', 'Sed0007543' => 'sed', 'Sed0009411' => 'sed', 'Sed0010765' => 'sed', 'Sed0012944' => 'sed', 'Sed0014682' => 'sed', 'Sed0016174' => 'sed', 'Sed0016796' => 'sed', 'Sed0020317' => 'sed', 'Sed0021467' => 'sed', 'SEGI_01316' => 'sgi', 'SEGI_03374' => 'sgi', 'SEGI_16265' => 'sgi', 'SEGI_18569' => 'sgi', 'SEGI_20351' => 'sgi', 'SEGI_26395' => 'sgi', 'SEGI_29469' => 'sgi', 'SEGI_34771' => 'sgi', 'SEGI_36769' => 'sgi', 'SEGI_37139' => 'sgi', 'SGA_v2.0_scaffold100G29687' => 'sas', 'SGA_v2.0_scaffold118G32472' => 'sas', 'SGA_v2.0_scaffold14G07051' => 'sas', 'SGA_v2.0_scaffold183G39845' => 'sas', 'SGA_v2.0_scaffold1G00174' => 'sas', 'SGA_v2.0_scaffold22G09714' => 'sas', 'SGA_v2.0_scaffold333G48992' => 'sas', 'SGA_v2.0_scaffold46G17491' => 'sas', 'SGA_v2.0_scaffold49G18294' => 'sas', 'SGA_v2.0_scaffold63G21658' => 'sas', 'SHI01741' => 'shi', 'SHI05771' => 'shi', 'SHI18077' => 'shi', 'SHI20525' => 'shi', 'SHI20527' => 'shi', 'SHI20528' => 'shi', 'SMO172G0185' => 'smo', 'SMO198G0020' => 'smo', 'SMO351G0006' => 'smo', 'SMO356G0118' => 'smo', 'SMO358G0296' => 'smo', 'SMO367G0079' => 'smo', 'SMO367G1277' => 'smo', 'Solyc01g014220.3' => 'sly', 'Solyc01g111770.2' => 'sly', 'Solyc02g078180.3' => 'sly', 'Solyc03g006430.3' => 'sly', 'Solyc03g006456.1' => 'sly', 'Solyc03g079860.2' => 'sly', 'Solyc04g079770.3' => 'sly', 'Solyc05g007430.4' => 'sly', 'Solyc07g063150.3' => 'sly', 'Solyc08g016620.3' => 'sly', 'Solyc09g057590.3' => 'sly', 'Solyc09g057600.1' => 'sly', 'Solyc10g009050.3' => 'sly', 'Solyc11g017420.2' => 'sly', 'Sopen01g053810' => 'spe', 'Sopen02g023040' => 'spe', 'Sopen03g002440' => 'spe', 'Sopen04g033350' => 'spe', 'Sopen05g003310' => 'spe', 'Sopen07g004050' => 'spe', 'Sopen07g031340' => 'spe', 'Sopen08g006990' => 'spe', 'Sopen10g004830' => 'spe', 'Sopen11g009370' => 'spe', 'Sp1g24450' => 'spa', 'Sp1g29670' => 'spa', 'Sp1g39600' => 'spa', 'Sp2g11080' => 'spa', 'Sp2g13970' => 'spa', 'Sp4g16130' => 'spa', 'Sp6g13080' => 'spa', 'Sp7g37270' => 'spa', 'TAR371G0065' => 'tar', 'TAR376G0340' => 'tar', 'TAR376G0435' => 'tar', 'TAR381G0002' => 'tar', 'TAR381G1236' => 'tar', 'TAR624G0055' => 'tar', 'TAR624G0324' => 'tar', 'TAR624G0696' => 'tar', 'TAR624G0906' => 'tar', 'TAR625G0107' => 'tar', 'TAR626G0015' => 'tar', 'TAR626G1356' => 'tar', 'TAR627G0888' => 'tar', 'TAR628G0399' => 'tar', 'TAR628G1327' => 'tar', 'TAR629G2831' => 'tar', 'TAR629G2874' => 'tar', 'TAR633G1432' => 'tar', 'TAR633G2771' => 'tar', 'THA.LOC104803394' => 'tha', 'THA.LOC104805153' => 'tha', 'THA.LOC104806784' => 'tha', 'THA.LOC104810473' => 'tha', 'THA.LOC104813100' => 'tha', 'THA.LOC104814215' => 'tha', 'THA.LOC104815554' => 'tha', 'THA.LOC104820544' => 'tha', 'THA.LOC104824754' => 'tha', 'THA.LOC104827717' => 'tha', 'Thecc.02G031400' => 'tca', 'Thecc.02G055900' => 'tca', 'Thecc.02G350800' => 'tca', 'Thecc.06G150900' => 'tca', 'Thecc.06G186600' => 'tca', 'Thecc.07G089600' => 'tca', 'Thecc.08G020400' => 'tca', 'Thecc.08G182100' => 'tca', 'Thhalv10000873m.g' => 'esa', 'Thhalv10004185m.g' => 'esa', 'Thhalv10006981m.g' => 'esa', 'Thhalv10007204m.g' => 'esa', 'Thhalv10011374m.g' => 'esa', 'Thhalv10013482m.g' => 'esa', 'Thhalv10017801m.g' => 'esa', 'Thhalv10024983m.g' => 'esa', 'TPR.G12072' => 'tpr', 'TPR.G15769' => 'tpr', 'TPR.G16504' => 'tpr', 'TPR.G16506' => 'tpr', 'TPR.G24345' => 'tpr', 'TPR.G26666' => 'tpr', 'TPR.G27320' => 'tpr', 'TPR.G31819' => 'tpr', 'TPR.G38879' => 'tpr', 'TPR.G39015' => 'tpr', 'TPR.G8819' => 'tpr', 'TWI09G0924' => 'twi', 'TWI12G0811' => 'twi', 'TWI12G1294' => 'twi', 'TWI31G0150' => 'twi', 'TWI36G1262' => 'twi', 'TWI38G1287' => 'twi', 'TWI38G1633' => 'twi', 'TWI38G1982' => 'twi', 'TWI39G0116' => 'twi', 'TWI60G1011' => 'twi', 'TWI63G0171' => 'twi', 'TWI73G0839' => 'twi', 'TWI79G1511' => 'twi', 'unitig_0.g915' => 'ugi', 'unitig_0.g916' => 'ugi', 'unitig_21.g20219' => 'ugi', 'unitig_21.g20416' => 'ugi', 'unitig_578.g16132' => 'ugi', 'unitig_578.g16718' => 'ugi', 'unitig_62.g23481' => 'ugi', 'unitig_744.g24535' => 'ugi', 'unitig_749.g13525' => 'ugi', 'vmacro01248' => 'vma', 'vmacro02290' => 'vma', 'vmacro10946' => 'vma', 'vmacro11865' => 'vma', 'vmacro12493' => 'vma', 'vmacro17322' => 'vma', 'vmacro21599' => 'vma', 'vmacro23041' => 'vma', 'VMungo0251G0004' => 'vmu', 'VMungo0251G2639' => 'vmu', 'VMungo0251G2967' => 'vmu', 'VMungo0540G0864' => 'vmu', 'VMungo0540G1569' => 'vmu', 'VMungo0647G0317' => 'vmu', 'VMungo0720G1373' => 'vmu', 'VMungo0720G1508' => 'vmu', 'VMungo1080G0485' => 'vmu', 'VMungo1215G3177' => 'vmu', 'Zm00001eb112600' => 'zma', 'Zm00001eb120220' => 'zma', 'Zm00001eb153240' => 'zma', 'Zm00001eb168880' => 'zma', 'Zm00001eb213920' => 'zma', 'Zm00001eb228280' => 'zma', 'Zm00001eb254580' => 'zma', 'Zm00001eb272180' => 'zma', 'Zm00001eb293190' => 'zma', 'Zm00001eb322930' => 'zma', 'Zm00001eb353360' => 'zma', 'Zm00001eb353390' => 'zma', 'Zm00001eb353430' => 'zma', 'Zm00001eb353440' => 'zma', 'Zm00001eb353780' => 'zma' ) $gf_id = 'HOM05D000499' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000499' ) $data_identifier = 'HOM05D000499' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 29, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 12, 'amhyb' => (int) 8, 'aly' => (int) 12, 'aox' => (int) 9, 'arhy' => (int) 26, 'ath' => (int) 8, 'atr' => (int) 7, 'acertr' => (int) 10, 'cqu' => (int) 15, 'bca' => (int) 29, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 11, 'cansat' => (int) 8, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 9, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 8, 'cpa' => (int) 10, 'csa' => (int) 7, 'camsi' => (int) 20, 'dca' => (int) 8, 'din' => (int) 12, 'dzi' => (int) 14, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 6, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 38, 'gra' => (int) 16, 'vvi' => (int) 8, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 5, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 11, 'lja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 11, 'mpo' => (int) 3, 'mbi' => (int) 14, 'mdo' => (int) 14, 'mtr' => (int) 8, 'cme' => (int) 9, 'egut' => (int) 9, 'ama' => (int) 11, 'nta' => (int) 17, 'nnu' => (int) 11, 'oeu' => (int) 18, 'osa' => (int) 8, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 6, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 9, 'rsi' => (int) 9, 'sbr' => (int) 10, 'sbo' => (int) 8, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 10, 'sas' => (int) 10, 'shi' => (int) 6, 'smo' => (int) 7, 'sly' => (int) 14, 'spe' => (int) 10, 'spa' => (int) 8, 'tar' => (int) 19, 'tha' => (int) 10, 'tca' => (int) 8, 'esa' => (int) 8, 'tpr' => (int) 11, 'twi' => (int) 13, 'ugi' => (int) 9, 'vma' => (int) 8, 'vmu' => (int) 10, 'zma' => (int) 15 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb353780' $species_info = array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ) $local_species = 'bra' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000499', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1066', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p29780' => 'bna', 'A02p33180' => 'bna', 'A03p16470' => 'bna', 'A03p66010' => 'bna', 'A04p25970' => 'bna', 'A06p01270' => 'bna', 'A06p46080' => 'bna', 'A07p11400' => 'bna', 'A08p01840' => 'bna', 'A08p08230' => 'bna', 'A08p25740' => 'bna', 'A09p32070' => 'bna', 'A09p37830' => 'bna', 'A09p42840' => 'bna', 'A09p42850' => 'bna', 'Aa31LG10G2060' => 'aar', 'Aa31LG2G7410' => 'aar', 'Aa31LG6G10200' => 'aar', 'Aa31LG6G16680' => 'aar', 'Aa31LG6G8470' => 'aar', 'Aa31LG9G12730' => 'aar', 'Aa31LG9G13680' => 'aar', 'Aa31LG9G14920' => 'aar', 'Aa31LG9G6650' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4977' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5467' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3254' => 'aag', 'Actinidia02578' => 'ach', 'Actinidia07693' => 'ach', 'Actinidia08413' => 'ach', 'Actinidia08414' => 'ach', 'Actinidia15289' => 'ach', 'Actinidia19871' => 'ach', 'Actinidia21475' => 'ach', 'Actinidia22576' => 'ach', 'Actinidia28327' => 'ach', 'Actinidia32491' => 'ach', 'Actinidia39463' => 'ach', 'Actinidia39571' => 'ach', 'Ah.01g013750' => 'amhyb', 'Ah.01g023210' => 'amhyb', 'Ah.04g164850' => 'amhyb', 'Ah.05g178060' => 'amhyb', 'Ah.07g204270' => 'amhyb', 'Ah.07g208480' => 'amhyb', 'Ah.09g237410' => 'amhyb', 'Ah.14g089460' => 'amhyb', 'AL1G41790' => 'aly', 'AL1G49050' => 'aly', 'AL1G53810' => 'aly', 'AL1G61400' => 'aly', 'AL4G18580' => 'aly', 'AL5G12510' => 'aly', 'AL5G12540' => 'aly', 'AL6G43230' => 'aly', 'AL7G10370' => 'aly', 'AL7G19250' => 'aly', 'AL8G12240' => 'aly', 'AL8G18540' => 'aly', 'Aqoxy1G02409' => 'aox', 'Aqoxy2G03993' => 'aox', 'Aqoxy3G03357' => 'aox', 'Aqoxy4G00785' => 'aox', 'Aqoxy5G02598' => 'aox', 'Aqoxy6G00132' => 'aox', 'Aqoxy7G01776' => 'aox', 'Aqoxy7G02316' => 'aox', 'Aqoxy7G03973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.12AFKW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B8730' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27IQR1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3F75VG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3RE0GA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41TCQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.527VTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FIR39' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5W8UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DA38EV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ63HS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H1I32C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HC27T5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4M8AP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7N3CZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9UVDZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LS1NQA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT1D4B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SKC4TM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCFV76' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF9Q1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQWD9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1ZM88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WE07RT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YCK7VH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJE6Q6' => 'arhy', 'AT1G28240' => 'ath', 'AT1G34550' => 'ath', 'AT1G53040' => 'ath', 'AT2G02910' => 'ath', 'AT4G09630' => 'ath', 'AT4G38500' => 'ath', 'AT5G42660' => 'ath', 'AT5G46220' => 'ath', 'ATR0152G026' => 'atr', 'ATR0564G343' => 'atr', 'ATR0706G151' => 'atr', 'ATR0733G207' => 'atr', 'ATR0751G234' => 'atr', 'ATR0807G048' => 'atr', 'ATR1091G084' => 'atr', 'Atru.chr10.1229' => 'acertr', 'Atru.chr10.1230' => 'acertr', 'Atru.chr10.1874' => 'acertr', 'Atru.chr11.1808' => 'acertr', 'Atru.chr13.1795' => 'acertr', 'Atru.chr13.570' => 'acertr', 'Atru.chr2.2608' => 'acertr', 'Atru.chr2.2609' => 'acertr', 'Atru.chr5.3428' => 'acertr', 'Atru.chr8.1171' => 'acertr', 'AUR62004651' => 'cqu', 'AUR62008675' => 'cqu', 'AUR62010014' => 'cqu', 'AUR62013004' => 'cqu', 'AUR62014825' => 'cqu', 'AUR62015015' => 'cqu', 'AUR62015151' => 'cqu', 'AUR62017020' => 'cqu', 'AUR62019422' => 'cqu', 'AUR62023570' => 'cqu', 'AUR62025571' => 'cqu', 'AUR62029098' => 'cqu', 'AUR62033863' => 'cqu', 'AUR62034296' => 'cqu', 'AUR62040075' => 'cqu', 'BcaB02g07334' => 'bca', 'BcaB02g10575' => 'bca', 'BcaB03g12119' => 'bca', 'BcaB03g12120' => 'bca', 'BcaB03g13945' => 'bca', 'BcaB04g17123' => 'bca', 'BcaB04g17867' => 'bca', 'BcaB04g19839' => 'bca', 'BcaB07g30317' => 'bca', 'BcaB07g32432' => 'bca', 'BcaB07g33362' => 'bca', 'BcaB08g36611' => 'bca', 'BcaC01g00028' => 'bca', 'BcaC01g01356' => 'bca', 'BcaC01g02034' => 'bca', 'BcaC01g06051' => 'bca', 'BcaC03g16839' => 'bca', 'BcaC03g17176' => 'bca', 'BcaC05g26829' => 'bca', 'BcaC06g31490' => 'bca', 'BcaC06g35344' => 'bca', 'BcaC06g36570' => 'bca', 'BcaC07g37537' => 'bca', 'BcaC08g43491' => 'bca', 'BcaC08g43773' => 'bca', 'BcaNung00234' => 'bca', 'BcaNung01982' => 'bca', 'BcaNung03707' => 'bca', 'BcaNung06454' => 'bca', 'BolC2t10762H' => 'bol', 'BolC2t11191H' => 'bol', 'BolC3t14322H' => 'bol', 'BolC3t19747H' => 'bol', 'BolC3t21425H' => 'bol', 'BolC4t27800H' => 'bol', 'BolC5t31423H' => 'bol', 'BolC6t35951H' => 'bol', 'BolC6t36282H' => 'bol', 'BolC7t40678H' => 'bol', 'BolC7t40679H' => 'bol', 'BolC7t42222H' => 'bol', 'BolC7t43492H' => 'bol', 'BolC7t46785H' => 'bol', 'BolC8t47853H' => 'bol', 'BolC9t56805H' => 'bol', 'BraA02t08000Z' => 'bra', 'BraA02t08341Z' => 'bra', 'BraA03t10936Z' => 'bra', 'BraA03t15657Z' => 'bra', 'BraA04t18100Z' => 'bra', 'BraA05t20523Z' => 'bra', 'BraA06t23353Z' => 'bra', 'BraA06t27473Z' => 'bra', 'BraA06t27769Z' => 'bra', 'BraA07t28928Z' => 'bra', 'BraA08t32236Z' => 'bra', 'BraA08t32841Z' => 'bra', 'BraA08t34524Z' => 'bra', 'BraA09t38742Z' => 'bra', 'BraA09t39295Z' => 'bra', 'C02p47180' => 'bna', 'C02p50990' => 'bna', 'C03p19360' => 'bna', 'C03p74950' => 'bna', 'C03p91000' => 'bna', 'C04p63260' => 'bna', 'C05p27050' => 'bna', 'C06p08750' => 'bna', 'C06p11490' => 'bna', 'C07p02820' => 'bna', 'C07p17180' => 'bna', 'C07p29440' => 'bna', 'C07p63730' => 'bna', 'C09p39260' => 'bna', 'CAN.G1164.34' => 'can', 'CAN.G1164.39' => 'can', 'CAN.G1530.3' => 'can', 'CAN.G162.61' => 'can', 'CAN.G176.6' => 'can', 'CAN.G289.49' => 'can', 'CAN.G370.21' => 'can', 'CAN.G370.22' => 'can', 'CAN.G371.117' => 'can', 'CAN.G58.37' => 'can', 'CAN.G588.98' => 'can', 'CANSAT21G2266' => 'cansat', 'CANSAT25G2799' => 'cansat', 'CANSAT35G0862' => 'cansat', 'CANSAT35G1704' => 'cansat', 'CANSAT35G1760' => 'cansat', 'CANSAT56G3971' => 'cansat', 'CANSAT56G4116' => 'cansat', 'CANSAT80G1259' => 'cansat', 'CARHR027730' => 'chi', 'CARHR033880' => 'chi', 'CARHR043270' => 'chi', 'CARHR145330' => 'chi', 'CARHR145340' => 'chi', 'CARHR175570' => 'chi', 'CARHR181570' => 'chi', 'CARHR258470' => 'chi', 'CARHR260490' => 'chi', 'CARHR294220' => 'chi', 'Carub.0001s2668' => 'cru', 'Carub.0001s3257' => 'cru', 'Carub.0001s4220' => 'cru', 'Carub.0005s0179' => 'cru', 'Carub.0006s2807' => 'cru', 'Carub.0007s0039' => 'cru', 'Carub.0008s0169' => 'cru', 'Carub.0008s0636' => 'cru', 'Ca_00338_v3' => 'car', 'Ca_00542_v3' => 'car', 'Ca_01844_v3' => 'car', 'Ca_10611_v3' => 'car', 'Ca_13326_v3' => 'car', 'Ca_17944_v3' => 'car', 'Ca_18546_v3' => 'car', 'Ca_24219_v3' => 'car', 'Ca_29972_v3' => 'car', 'CBR_g3681' => 'cbr', 'CBR_g40021' => 'cbr', 'Cc01_g08140' => 'ccan', 'Cc02_g13410' => 'ccan', 'Cc02_g37480' => 'ccan', 'Cc05_g12030' => 'ccan', 'Cc09_g03370' => 'ccan', 'Cc09_g10300' => 'ccan', 'Cc10_g03530' => 'ccan', 'Cc10_g11380' => 'ccan', 'CDE01G0176' => 'cde', 'CDE02G0675' => 'cde', 'CDE02G0942' => 'cde', 'CDE02G1153' => 'cde', 'CDE02G4177' => 'cde', 'CDE04G2117' => 'cde', 'CDE04G2736' => 'cde', 'CDE08G1161' => 'cde', 'CDE09G1238' => 'cde', 'Cfa000467' => 'cfa', 'Cfa000947' => 'cfa', 'Cfa004969' => 'cfa', 'Cfa005284' => 'cfa', 'Cfa008993' => 'cfa', 'Cfa018187' => 'cfa', 'Cfa018454' => 'cfa', 'Cfa020585' => 'cfa', 'Ciclev10000424m.g' => 'ccl', 'Ciclev10003605m.g' => 'ccl', 'Ciclev10007828m.g' => 'ccl', 'Ciclev10014620m.g' => 'ccl', 'Ciclev10015169m.g' => 'ccl', 'Ciclev10018291m.g' => 'ccl', 'Ciclev10028256m.g' => 'ccl', 'Ciclev10033822m.g' => 'ccl', 'CiPaw.05G060300' => 'cil', 'CiPaw.05G085000' => 'cil', 'CiPaw.06G083700' => 'cil', 'CiPaw.06G120300' => 'cil', 'CiPaw.09G060500' => 'cil', 'CiPaw.09G123800' => 'cil', 'CiPaw.11G169700' => 'cil', 'CiPaw.12G118300' => 'cil', 'CiPaw.15G071000' => 'cil', 'CiPaw.15G081900' => 'cil', 'ClCG01G024610' => 'cla', 'ClCG03G006070' => 'cla', 'ClCG05G019250' => 'cla', 'ClCG09G009500' => 'cla', 'ClCG11G008200' => 'cla', 'ClCG11G018080' => 'cla', 'COL.COLO4_17373' => 'col', 'COL.COLO4_22994' => 'col', 'COL.COLO4_26389' => 'col', 'COL.COLO4_27170' => 'col', 'COL.COLO4_31074' => 'col', 'COL.COLO4_31465' => 'col', 'COL.COLO4_36438' => 'col', 'COL.COLO4_36439' => 'col', 'Cpa.g.c38781' => 'cpa', 'Cpa.g.sc128.12' => 'cpa', 'Cpa.g.sc166.7' => 'cpa', 'Cpa.g.sc166.8' => 'cpa', 'Cpa.g.sc20.111' => 'cpa', 'Cpa.g.sc27.31' => 'cpa', 'Cpa.g.sc64.36' => 'cpa', 'Cpa.g.sc64.37' => 'cpa', 'Cpa.g.sc66.49' => 'cpa', 'Cpa.g.sc80.64' => 'cpa', 'CsaV3_1G012320' => 'csa', 'CsaV3_2G008480' => 'csa', 'CsaV3_2G033450' => 'csa', 'CsaV3_3G044830' => 'csa', 'CsaV3_4G033710' => 'csa', 'CsaV3_6G051730' => 'csa', 'CsaV3_7G025350' => 'csa', 'CSS0001067' => 'camsi', 'CSS0005996' => 'camsi', 'CSS0006590' => 'camsi', 'CSS0009673' => 'camsi', 'CSS0010201' => 'camsi', 'CSS0010549' => 'camsi', 'CSS0011364' => 'camsi', 'CSS0014473' => 'camsi', 'CSS0014961' => 'camsi', 'CSS0020191' => 'camsi', 'CSS0021165' => 'camsi', 'CSS0022306' => 'camsi', 'CSS0030591' => 'camsi', 'CSS0030696' => 'camsi', 'CSS0032653' => 'camsi', 'CSS0037487' => 'camsi', 'CSS0041102' => 'camsi', 'CSS0041261' => 'camsi', 'CSS0046246' => 'camsi', 'CSS0049256' => 'camsi', 'DCAR_004075' => 'dca', 'DCAR_011538' => 'dca', 'DCAR_019553' => 'dca', 'DCAR_020952' => 'dca', 'DCAR_021739' => 'dca', 'DCAR_027407' => 'dca', 'DCAR_027913' => 'dca', 'DCAR_028066' => 'dca', 'Dinv05899' => 'din', 'Dinv07563' => 'din', 'Dinv08010' => 'din', 'Dinv14125' => 'din', 'Dinv20172' => 'din', 'Dinv30743' => 'din', 'Dinv31229' => 'din', 'Dinv34162' => 'din', 'Dinv36028' => 'din', 'Dinv39368' => 'din', 'Dinv40565' => 'din', 'Dinv41706' => 'din', 'Duzib052G0089' => 'dzi', 'Duzib116G0641' => 'dzi', 'Duzib132G0069' => 'dzi', 'Duzib132G1219' => 'dzi', 'Duzib147G0278' => 'dzi', 'Duzib160G0480' => 'dzi', 'Duzib170G0661' => 'dzi', 'Duzib177G0591' => 'dzi', 'Duzib187G1353' => 'dzi', 'Duzib192G0858' => 'dzi', 'Duzib192G0883' => 'dzi', 'Duzib213G0506' => 'dzi', 'Duzib235G0289' => 'dzi', 'Duzib251G0422' => 'dzi', 'ECA232G3898' => 'eca', 'ECA233G5950' => 'eca', 'ECA234G1699' => 'eca', 'ECA234G2421' => 'eca', 'ECA236G0426' => 'eca', 'ECA236G4331' => 'eca', 'ECA248G2573' => 'eca', 'EL10Ac1g00077' => 'bvu', 'EL10Ac1g01746' => 'bvu', 'EL10Ac2g03464' => 'bvu', 'EL10Ac4g08176' => 'bvu', 'EL10Ac7g17521' => 'bvu', 'EL10Ac8g20386' => 'bvu', 'EL10Ac9g21343' => 'bvu', 'EL10Ac9g22688' => 'bvu', 'Eucgr.B03434' => 'egr', 'Eucgr.D00618' => 'egr', 'Eucgr.E02395' => 'egr', 'Eucgr.F01129' => 'egr', 'Eucgr.F02622' => 'egr', 'Eucgr.F04207' => 'egr', 'FAN01G0570' => 'fan', 'FAN03G3351' => 'fan', 'FAN06G3702' => 'fan', 'FAN07G2149' => 'fan', 'FAN10G3758' => 'fan', 'FAN11G1170' => 'fan', 'FAN11G2050' => 'fan', 'FAN11G2724' => 'fan', 'FAN12G1700' => 'fan', 'FAN12G2028' => 'fan', 'FAN15G1160' => 'fan', 'FAN15G3063' => 'fan', 'FAN16G2540' => 'fan', 'FAN16G3077' => 'fan', 'FAN16G3624' => 'fan', 'FAN17G0221' => 'fan', 'FAN20G2492' => 'fan', 'FAN20G2905' => 'fan', 'FAN21G0548' => 'fan', 'FAN21G1300' => 'fan', 'FAN22G0077' => 'fan', 'FAN22G1315' => 'fan', 'FAN24G1280' => 'fan', 'FAN24G1445' => 'fan', 'FAN24G3527' => 'fan', 'FAN25G0464' => 'fan', 'FAN25G2885' => 'fan', 'FAN25G3270' => 'fan', 'FAN27G1101' => 'fan', 'FAN27G2846' => 'fan', 'FAN27G3524' => 'fan', 'FvH4_2g11770' => 'fve', 'FvH4_2g15630' => 'fve', 'FvH4_3g05570' => 'fve', 'FvH4_3g09110' => 'fve', 'FvH4_3g19940' => 'fve', 'FvH4_4g04821' => 'fve', 'FvH4_4g31480' => 'fve', 'FvH4_7g01740' => 'fve', 'Glyma.05G130400' => 'gma', 'Glyma.05G156400' => 'gma', 'Glyma.07G197000' => 'gma', 'Glyma.08G085151' => 'gma', 'Glyma.08G114500' => 'gma', 'Glyma.08G300400' => 'gma', 'Glyma.10G215800' => 'gma', 'Glyma.12G224400' => 'gma', 'Glyma.13G179300' => 'gma', 'Glyma.13G218151' => 'gma', 'Glyma.13G238800' => 'gma', 'Glyma.13G276900' => 'gma', 'Glyma.14G078200' => 'gma', 'Glyma.15G074500' => 'gma', 'Glyma.15G094100' => 'gma', 'Glyma.17G247200' => 'gma', 'Glyma.18G120100' => 'gma', 'Glyma.20G176000' => 'gma', 'Gohir.A01G063600' => 'ghi', 'Gohir.A01G170301' => 'ghi', 'Gohir.A02G060500' => 'ghi', 'Gohir.A05G133850' => 'ghi', 'Gohir.A05G161400' => 'ghi', 'Gohir.A06G012900' => 'ghi', 'Gohir.A06G035901' => 'ghi', 'Gohir.A06G127100' => 'ghi', 'Gohir.A06G210500' => 'ghi', 'Gohir.A08G008650' => 'ghi', 'Gohir.A09G072700' => 'ghi', 'Gohir.A09G088301' => 'ghi', 'Gohir.A10G040600' => 'ghi', 'Gohir.A12G036300' => 'ghi', 'Gohir.A12G143350' => 'ghi', 'Gohir.A12G165500' => 'ghi', 'Gohir.A13G145700' => 'ghi', 'Gohir.D01G050000' => 'ghi', 'Gohir.D01G051366' => 'ghi', 'Gohir.D01G161350' => 'ghi', 'Gohir.D02G065900' => 'ghi', 'Gohir.D05G164200' => 'ghi', 'Gohir.D05G355500' => 'ghi', 'Gohir.D06G010400' => 'ghi', 'Gohir.D06G111250' => 'ghi', 'Gohir.D06G132000' => 'ghi', 'Gohir.D06G210500' => 'ghi', 'Gohir.D07G165675' => 'ghi', 'Gohir.D08G062240' => 'ghi', 'Gohir.D08G086101' => 'ghi', 'Gohir.D08G138060' => 'ghi', 'Gohir.D09G072300' => 'ghi', 'Gohir.D10G041400' => 'ghi', 'Gohir.D11G191020' => 'ghi', 'Gohir.D11G212066' => 'ghi', 'Gohir.D12G036300' => 'ghi', 'Gohir.D12G168600' => 'ghi', 'Gohir.D13G150600' => 'ghi', 'Gorai.001G057300' => 'gra', 'Gorai.002G069900' => 'gra', 'Gorai.002G200000' => 'gra', 'Gorai.003G067600' => 'gra', 'Gorai.005G074800' => 'gra', 'Gorai.006G087300' => 'gra', 'Gorai.008G037500' => 'gra', 'Gorai.008G181400' => 'gra', 'Gorai.009G169400' => 'gra', 'Gorai.009G387900' => 'gra', 'Gorai.010G013300' => 'gra', 'Gorai.010G153800' => 'gra', 'Gorai.010G255800' => 'gra', 'Gorai.011G043700' => 'gra', 'Gorai.011G198900' => 'gra', 'Gorai.013G168400' => 'gra', 'GSVIVG01005212001' => 'vvi', 'GSVIVG01006163001' => 'vvi', 'GSVIVG01009625001' => 'vvi', 'GSVIVG01014338001' => 'vvi', 'GSVIVG01020005001' => 'vvi', 'GSVIVG01021450001' => 'vvi', 'GSVIVG01023975001' => 'vvi', 'GSVIVG01034490001' => 'vvi', 'HanXRQChr04g0112071' => 'han', 'HanXRQChr05g0131151' => 'han', 'HanXRQChr09g0262371' => 'han', 'HanXRQChr09g0268401' => 'han', 'HanXRQChr10g0279241' => 'han', 'HanXRQChr10g0297961' => 'han', 'HanXRQChr11g0326231' => 'han', 'HanXRQChr11g0328471' => 'han', 'HanXRQChr16g0507941' => 'han', 'HanXRQChr17g0560211' => 'han', 'Haze_02108' => 'cav', 'Haze_02428' => 'cav', 'Haze_05593' => 'cav', 'Haze_06448' => 'cav', 'Haze_09427' => 'cav', 'Haze_12022' => 'cav', 'Haze_17612' => 'cav', 'Haze_17928' => 'cav', 'Hma1.2p1_0032F.1_g019250' => 'hma', 'Hma1.2p1_0163F.1_g072690' => 'hma', 'Hma1.2p1_0265F.1_g106710' => 'hma', 'Hma1.2p1_0286F.1_g113970' => 'hma', 'Hma1.2p1_0363F.1_g136640' => 'hma', 'Hma1.2p1_0584F.1_g183470' => 'hma', 'Hma1.2p1_0885F.1_g232570' => 'hma', 'HPP92_006022' => 'vpl', 'HPP92_007320' => 'vpl', 'HPP92_011521' => 'vpl', 'HPP92_019387' => 'vpl', 'HPP92_024038' => 'vpl', 'Hund05891' => 'sun', 'Hund06450' => 'sun', 'Hund12053' => 'sun', 'Hund16800' => 'sun', 'Hund21222' => 'sun', 'Hund22896' => 'sun', 'Hund23746' => 'sun', 'Hund27083' => 'sun', 'Lalb_Chr02g0141831' => 'lal', 'Lalb_Chr02g0141841' => 'lal', 'Lalb_Chr05g0220411' => 'lal', 'Lalb_Chr06g0162081' => 'lal', 'Lalb_Chr09g0327651' => 'lal', 'Lalb_Chr13g0295051' => 'lal', 'Lalb_Chr15g0086801' => 'lal', 'Lalb_Chr16g0383781' => 'lal', 'Lalb_Chr16g0383791' => 'lal', 'Lalb_Chr18g0055441' => 'lal', 'Lalb_Chr18g0059611' => 'lal', 'Lalb_Chr20g0109661' => 'lal', 'Lalb_Chr20g0109831' => 'lal', 'Lalb_Chr20g0121871' => 'lal', 'Lalb_Chr22g0355361' => 'lal', 'Lalb_Chr25g0286371' => 'lal', 'Lj1A1187G43' => 'lonja', 'Lj1A1205T50' => 'lonja', 'Lj1A800G33' => 'lonja', 'Lj1C1187T7' => 'lonja', 'Lj1C843T11' => 'lonja', 'Lj1g0010940' => 'lja', 'Lj2A288T69' => 'lonja', 'Lj3g0024276' => 'lja', 'Lj4A47T76' => 'lonja', 'Lj4g0005805' => 'lja', 'Lj4g0006097' => 'lja', 'Lj4g0008528' => 'lja', 'Lj4g0024907' => 'lja', 'Lj5g0012472' => 'lja', 'Lj5g0018648' => 'lja', 'Lj6C789G1' => 'lonja', 'Lj6g0004000' => 'lja', 'Lj7A292G67' => 'lonja', 'Lj7A292T64' => 'lonja', 'Lj9A400T58' => 'lonja', 'Lsat_1_v5_gn_1_126181' => 'lsa', 'Lsat_1_v5_gn_4_123041' => 'lsa', 'Lsat_1_v5_gn_4_133620' => 'lsa', 'Lsat_1_v5_gn_4_53221' => 'lsa', 'Lsat_1_v5_gn_4_71961' => 'lsa', 'Lsat_1_v5_gn_7_105241' => 'lsa', 'Lsat_1_v5_gn_7_21361' => 'lsa', 'Lsat_1_v5_gn_7_28860' => 'lsa', 'Lsat_1_v5_gn_7_31260' => 'lsa', 'Lsat_1_v5_gn_8_52801' => 'lsa', 'Manes.02G191400' => 'mes', 'Manes.03G110100' => 'mes', 'Manes.04G071100' => 'mes', 'Manes.05G100500' => 'mes', 'Manes.05G164700' => 'mes', 'Manes.15G087000' => 'mes', 'Manes.15G121500' => 'mes', 'Manes.16G028300' => 'mes', 'Manes.17G046100' => 'mes', 'Manes.17G069800' => 'mes', 'Manes.18G100500' => 'mes', 'Mapoly0002s0109' => 'mpo', 'Mapoly0024s0007' => 'mpo', 'Mapoly0089s0032' => 'mpo', 'MBI04_g42241_MAGBIO' => 'mbi', 'MBI05_g11988_MAGBIO' => 'mbi', 'MBI05_g35452_MAGBIO' => 'mbi', 'MBI07_g30179_MAGBIO' => 'mbi', 'MBI07_g35859_MAGBIO' => 'mbi', 'MBI07_g35860_MAGBIO' => 'mbi', 'MBI07_g37166_MAGBIO' => 'mbi', 'MBI08_g18172_MAGBIO' => 'mbi', 'MBI09_g08441_MAGBIO' => 'mbi', 'MBI13_g01676_MAGBIO' => 'mbi', 'MBI14_g42955_MAGBIO' => 'mbi', 'MBI16_g13161_MAGBIO' => 'mbi', 'MBI17_g27204_MAGBIO' => 'mbi', 'MBI19_g21595_MAGBIO' => 'mbi', 'MD00G1148400' => 'mdo', 'MD02G1301200' => 'mdo', 'MD03G1227800' => 'mdo', 'MD05G1041100' => 'mdo', 'MD05G1124800' => 'mdo', 'MD05G1284000' => 'mdo', 'MD05G1338800' => 'mdo', 'MD05G1338900' => 'mdo', 'MD07G1022800' => 'mdo', 'MD10G1047500' => 'mdo', 'MD10G1127500' => 'mdo', 'MD10G1262300' => 'mdo', 'MD10G1293800' => 'mdo', 'MD16G1074300' => 'mdo', 'Medtr1g021670' => 'mtr', 'Medtr1g096320' => 'mtr', 'Medtr2g013690' => 'mtr', 'Medtr2g019450' => 'mtr', 'Medtr2g085170' => 'mtr', 'Medtr4g088785' => 'mtr', 'Medtr8g055930' => 'mtr', 'Medtr8g085850' => 'mtr', 'MELO3C002605.2' => 'cme', 'MELO3C003891.2' => 'cme', 'MELO3C004012.2' => 'cme', 'MELO3C007134.2' => 'cme', 'MELO3C008118.2' => 'cme', 'MELO3C016700.2' => 'cme', 'MELO3C024127.2' => 'cme', 'MELO3C033361.2' => 'cme', 'MELO3C033362.2' => 'cme', 'Migut.C00430' => 'egut', 'Migut.C01246' => 'egut', 'Migut.E00101' => 'egut', 'Migut.H01486' => 'egut', 'Migut.H01939' => 'egut', 'Migut.K00360' => 'egut', 'Migut.M00910' => 'egut', 'Migut.M01139' => 'egut', 'Migut.N02677' => 'egut', 'MSTRG.13252' => 'ama', 'MSTRG.14701' => 'ama', 'MSTRG.1521' => 'ama', 'MSTRG.15884' => 'ama', 'MSTRG.16242' => 'ama', 'MSTRG.22285' => 'ama', 'MSTRG.22444' => 'ama', 'MSTRG.2349' => 'ama', 'MSTRG.26308' => 'ama', 'MSTRG.28296' => 'ama', 'MSTRG.9895' => 'ama', 'Nitab4.5_0000110g0060' => 'nta', 'Nitab4.5_0000420g0130' => 'nta', 'Nitab4.5_0000422g0030' => 'nta', 'Nitab4.5_0000560g0180' => 'nta', 'Nitab4.5_0000703g0100' => 'nta', 'Nitab4.5_0000786g0200' => 'nta', 'Nitab4.5_0001336g0020' => 'nta', 'Nitab4.5_0001796g0030' => 'nta', 'Nitab4.5_0003348g0060' => 'nta', 'Nitab4.5_0003698g0040' => 'nta', 'Nitab4.5_0003942g0090' => 'nta', 'Nitab4.5_0004775g0070' => 'nta', 'Nitab4.5_0004864g0030' => 'nta', 'Nitab4.5_0005615g0020' => 'nta', 'Nitab4.5_0009288g0030' => 'nta', 'Nitab4.5_0009341g0010' => 'nta', 'Nitab4.5_0009535g0010' => 'nta', 'Nn1g03995' => 'nnu', 'Nn1g04100' => 'nnu', 'Nn1g06530' => 'nnu', 'Nn3g16404' => 'nnu', 'Nn3g17212' => 'nnu', 'Nn3g20776' => 'nnu', 'Nn3g21923' => 'nnu', 'Nn5g27737' => 'nnu', 'Nn5g29461' => 'nnu', 'Nn7g38355' => 'nnu', 'Nn8g39873' => 'nnu', 'Oeu000548.2' => 'oeu', 'Oeu004672.1' => 'oeu', 'Oeu015605.2' => 'oeu', 'Oeu016092.1' => 'oeu', 'Oeu017879.3' => 'oeu', 'Oeu024910.1' => 'oeu', 'Oeu028965.1' => 'oeu', 'Oeu031269.1' => 'oeu', 'Oeu031270.1' => 'oeu', 'Oeu032535.1' => 'oeu', 'Oeu034151.1' => 'oeu', 'Oeu034152.1' => 'oeu', 'Oeu034588.2' => 'oeu', 'Oeu050846.1' => 'oeu', 'Oeu050849.2' => 'oeu', 'Oeu051063.2' => 'oeu', 'Oeu052368.1' => 'oeu', 'Oeu052370.1' => 'oeu', 'Os01g0210400' => 'osa', 'Os01g0304300' => 'osa', 'Os01g0749100' => 'osa', 'Os02g0745800' => 'osa', 'Os03g0769050' => 'osa', 'Os05g0531500' => 'osa', 'Os06g0724300' => 'osa', 'Os11g0198100' => 'osa', 'Peaxi162Scf00069g01425' => 'pax', 'Peaxi162Scf00280g00811' => 'pax', 'Peaxi162Scf00310g00615' => 'pax', 'Peaxi162Scf00362g00542' => 'pax', 'Peaxi162Scf00461g00310' => 'pax', 'Peaxi162Scf00530g00118' => 'pax', 'Peaxi162Scf00541g00057' => 'pax', 'Peaxi162Scf00661g00017' => 'pax', 'Peaxi162Scf00926g00027' => 'pax', 'Peaxi162Scf01064g00263' => 'pax', 'Peaxi162Scf01211g00135' => 'pax', 'PGR004G2336' => 'pgr', 'PGR042G0327' => 'pgr', 'PGR042G1957' => 'pgr', 'PGR042G2003' => 'pgr', 'PGR042G3929' => 'pgr', 'PGR083G1137' => 'pgr', 'PGR083G1364' => 'pgr', 'PGSC0003DMG400003381' => 'stu', 'PGSC0003DMG400003417' => 'stu', 'PGSC0003DMG400008981' => 'stu', 'PGSC0003DMG400012417' => 'stu', 'PGSC0003DMG400012823' => 'stu', 'PGSC0003DMG400016885' => 'stu', 'PGSC0003DMG400022812' => 'stu', 'PGSC0003DMG400029726' => 'stu', 'PGSC0003DMG401009243' => 'stu', 'PGSC0003DMG401031505' => 'stu', 'PGSC0003DMG402031505' => 'stu', 'Phvul.001G017600' => 'pvu', 'Phvul.002G193500' => 'pvu', 'Phvul.002G228900' => 'pvu', 'Phvul.002G236800' => 'pvu', 'Phvul.003G049500' => 'pvu', 'Phvul.005G072000' => 'pvu', 'Phvul.006G164800' => 'pvu', 'Phvul.006G185100' => 'pvu', 'Phvul.007G090000' => 'pvu', 'Potri.001G399800' => 'ptr', 'Potri.002G149900' => 'ptr', 'Potri.004G044100' => 'ptr', 'Potri.004G177600' => 'ptr', 'Potri.009G138000' => 'ptr', 'Potri.010G094000' => 'ptr', 'Potri.011G053000' => 'ptr', 'Potri.011G119300' => 'ptr', 'Potri.013G113700' => 'ptr', 'Potri.018G107800' => 'ptr', 'Potri.019G084100' => 'ptr', 'Pp3c14_23720' => 'ppa', 'Pp3c16_6340' => 'ppa', 'Pp3c23_13420' => 'ppa', 'Pp3c24_2740' => 'ppa', 'Pp3c25_860' => 'ppa', 'Pp3c8_21750' => 'ppa', 'Prupe.1G273000' => 'ppe', 'Prupe.1G273700' => 'ppe', 'Prupe.1G274100' => 'ppe', 'Prupe.2G023300' => 'ppe', 'Prupe.4G048000' => 'ppe', 'Prupe.4G080400' => 'ppe', 'Prupe.4G181200' => 'ppe', 'Prupe.8G056900' => 'ppe', 'Prupe.8G168700' => 'ppe', 'Psat1g189080' => 'psa', 'Psat1g204760' => 'psa', 'Psat4g175560' => 'psa', 'Psat4g177720' => 'psa', 'Psat5g244240' => 'psa', 'Psat6g010720' => 'psa', 'Psat6g187200' => 'psa', 'Psat7g072040' => 'psa', 'PSO017G3501' => 'pso', 'PSO063G2148' => 'pso', 'PSO063G5608' => 'pso', 'PSO210G6392' => 'pso', 'PSO541G2319' => 'pso', 'PSO541G2836' => 'pso', 'PSO541G4012' => 'pso', 'PSO541G6253' => 'pso', 'PSO675G0580' => 'pso', 'PSO675G0856' => 'pso', 'PSO675G5635' => 'pso', 'PSO675G9157' => 'pso', 'PSO832G1660' => 'pso', 'PSO832G1969' => 'pso', 'QL02p007186' => 'qlo', 'QL02p033904' => 'qlo', 'QL03p064391' => 'qlo', 'QL05p040593' => 'qlo', 'QL05p058242' => 'qlo', 'QL08p021825' => 'qlo', 'QL11p004981' => 'qlo', 'RcHm_v2.0_Chr1g0318301' => 'rch', 'RcHm_v2.0_Chr4g0418501' => 'rch', 'RcHm_v2.0_Chr4g0439971' => 'rch', 'RcHm_v2.0_Chr5g0008541' => 'rch', 'RcHm_v2.0_Chr5g0014101' => 'rch', 'RcHm_v2.0_Chr5g0014131' => 'rch', 'RcHm_v2.0_Chr5g0033621' => 'rch', 'RcHm_v2.0_Chr6g0272041' => 'rch', 'RcHm_v2.0_Chr6g0278831' => 'rch', 'Rhsim02G0130400' => 'rsi', 'Rhsim02G0171100' => 'rsi', 'Rhsim05G0053000' => 'rsi', 'Rhsim05G0053100' => 'rsi', 'Rhsim06G0096500' => 'rsi', 'Rhsim06G0096600' => 'rsi', 'Rhsim06G0199100' => 'rsi', 'Rhsim12G0062300' => 'rsi', 'Rhsim12G0062800' => 'rsi', 'Sabra02G0118600' => 'sbr', 'Sabra04G0027300' => 'sbr', 'Sabra04G0119500' => 'sbr', 'Sabra08G0112500' => 'sbr', 'Sabra11G0036800' => 'sbr', 'Sabra11G0103800' => 'sbr', 'Sabra13G0096300' => 'sbr', 'Sabra16G0262300' => 'sbr', 'Sabra18G0091700' => 'sbr', 'Sabra19G0095400' => 'sbr', 'SalBow6G3080' => 'sbo', 'SalBow7G1157' => 'sbo', 'SalBow7G2123' => 'sbo', 'SalBow7G2285' => 'sbo', 'SalBow7G3537' => 'sbo', 'SalBow8G2947' => 'sbo', 'SalBow8G4463' => 'sbo', 'SalBow8G5466' => 'sbo', 'Sc01g0001750' => 'sci', 'Sc02g0006640' => 'sci', 'Sc02g0006670' => 'sci', 'Sc04g0008220' => 'sci', 'Sc05g0006190' => 'sci', 'Sc08g0002760' => 'sci', 'Sc17g0006170' => 'sci', 'Sc22g0002050' => 'sci', 'Sc23g0001190' => 'sci', 'Sc24g0000980' => 'sci', 'Sed0006245' => 'sed', 'Sed0007543' => 'sed', 'Sed0009411' => 'sed', 'Sed0010765' => 'sed', 'Sed0012944' => 'sed', 'Sed0014682' => 'sed', 'Sed0016174' => 'sed', 'Sed0016796' => 'sed', 'Sed0020317' => 'sed', 'Sed0021467' => 'sed', 'SEGI_01316' => 'sgi', 'SEGI_03374' => 'sgi', 'SEGI_16265' => 'sgi', 'SEGI_18569' => 'sgi', 'SEGI_20351' => 'sgi', 'SEGI_26395' => 'sgi', 'SEGI_29469' => 'sgi', 'SEGI_34771' => 'sgi', 'SEGI_36769' => 'sgi', 'SEGI_37139' => 'sgi', 'SGA_v2.0_scaffold100G29687' => 'sas', 'SGA_v2.0_scaffold118G32472' => 'sas', 'SGA_v2.0_scaffold14G07051' => 'sas', 'SGA_v2.0_scaffold183G39845' => 'sas', 'SGA_v2.0_scaffold1G00174' => 'sas', 'SGA_v2.0_scaffold22G09714' => 'sas', 'SGA_v2.0_scaffold333G48992' => 'sas', 'SGA_v2.0_scaffold46G17491' => 'sas', 'SGA_v2.0_scaffold49G18294' => 'sas', 'SGA_v2.0_scaffold63G21658' => 'sas', 'SHI01741' => 'shi', 'SHI05771' => 'shi', 'SHI18077' => 'shi', 'SHI20525' => 'shi', 'SHI20527' => 'shi', 'SHI20528' => 'shi', 'SMO172G0185' => 'smo', 'SMO198G0020' => 'smo', 'SMO351G0006' => 'smo', 'SMO356G0118' => 'smo', 'SMO358G0296' => 'smo', 'SMO367G0079' => 'smo', 'SMO367G1277' => 'smo', 'Solyc01g014220.3' => 'sly', 'Solyc01g111770.2' => 'sly', 'Solyc02g078180.3' => 'sly', 'Solyc03g006430.3' => 'sly', 'Solyc03g006456.1' => 'sly', 'Solyc03g079860.2' => 'sly', 'Solyc04g079770.3' => 'sly', 'Solyc05g007430.4' => 'sly', 'Solyc07g063150.3' => 'sly', 'Solyc08g016620.3' => 'sly', 'Solyc09g057590.3' => 'sly', 'Solyc09g057600.1' => 'sly', 'Solyc10g009050.3' => 'sly', 'Solyc11g017420.2' => 'sly', 'Sopen01g053810' => 'spe', 'Sopen02g023040' => 'spe', 'Sopen03g002440' => 'spe', 'Sopen04g033350' => 'spe', 'Sopen05g003310' => 'spe', 'Sopen07g004050' => 'spe', 'Sopen07g031340' => 'spe', 'Sopen08g006990' => 'spe', 'Sopen10g004830' => 'spe', 'Sopen11g009370' => 'spe', 'Sp1g24450' => 'spa', 'Sp1g29670' => 'spa', 'Sp1g39600' => 'spa', 'Sp2g11080' => 'spa', 'Sp2g13970' => 'spa', 'Sp4g16130' => 'spa', 'Sp6g13080' => 'spa', 'Sp7g37270' => 'spa', 'TAR371G0065' => 'tar', 'TAR376G0340' => 'tar', 'TAR376G0435' => 'tar', 'TAR381G0002' => 'tar', 'TAR381G1236' => 'tar', 'TAR624G0055' => 'tar', 'TAR624G0324' => 'tar', 'TAR624G0696' => 'tar', 'TAR624G0906' => 'tar', 'TAR625G0107' => 'tar', 'TAR626G0015' => 'tar', 'TAR626G1356' => 'tar', 'TAR627G0888' => 'tar', 'TAR628G0399' => 'tar', 'TAR628G1327' => 'tar', 'TAR629G2831' => 'tar', 'TAR629G2874' => 'tar', 'TAR633G1432' => 'tar', 'TAR633G2771' => 'tar', 'THA.LOC104803394' => 'tha', 'THA.LOC104805153' => 'tha', 'THA.LOC104806784' => 'tha', 'THA.LOC104810473' => 'tha', 'THA.LOC104813100' => 'tha', 'THA.LOC104814215' => 'tha', 'THA.LOC104815554' => 'tha', 'THA.LOC104820544' => 'tha', 'THA.LOC104824754' => 'tha', 'THA.LOC104827717' => 'tha', 'Thecc.02G031400' => 'tca', 'Thecc.02G055900' => 'tca', 'Thecc.02G350800' => 'tca', 'Thecc.06G150900' => 'tca', 'Thecc.06G186600' => 'tca', 'Thecc.07G089600' => 'tca', 'Thecc.08G020400' => 'tca', 'Thecc.08G182100' => 'tca', 'Thhalv10000873m.g' => 'esa', 'Thhalv10004185m.g' => 'esa', 'Thhalv10006981m.g' => 'esa', 'Thhalv10007204m.g' => 'esa', 'Thhalv10011374m.g' => 'esa', 'Thhalv10013482m.g' => 'esa', 'Thhalv10017801m.g' => 'esa', 'Thhalv10024983m.g' => 'esa', 'TPR.G12072' => 'tpr', 'TPR.G15769' => 'tpr', 'TPR.G16504' => 'tpr', 'TPR.G16506' => 'tpr', 'TPR.G24345' => 'tpr', 'TPR.G26666' => 'tpr', 'TPR.G27320' => 'tpr', 'TPR.G31819' => 'tpr', 'TPR.G38879' => 'tpr', 'TPR.G39015' => 'tpr', 'TPR.G8819' => 'tpr', 'TWI09G0924' => 'twi', 'TWI12G0811' => 'twi', 'TWI12G1294' => 'twi', 'TWI31G0150' => 'twi', 'TWI36G1262' => 'twi', 'TWI38G1287' => 'twi', 'TWI38G1633' => 'twi', 'TWI38G1982' => 'twi', 'TWI39G0116' => 'twi', 'TWI60G1011' => 'twi', 'TWI63G0171' => 'twi', 'TWI73G0839' => 'twi', 'TWI79G1511' => 'twi', 'unitig_0.g915' => 'ugi', 'unitig_0.g916' => 'ugi', 'unitig_21.g20219' => 'ugi', 'unitig_21.g20416' => 'ugi', 'unitig_578.g16132' => 'ugi', 'unitig_578.g16718' => 'ugi', 'unitig_62.g23481' => 'ugi', 'unitig_744.g24535' => 'ugi', 'unitig_749.g13525' => 'ugi', 'vmacro01248' => 'vma', 'vmacro02290' => 'vma', 'vmacro10946' => 'vma', 'vmacro11865' => 'vma', 'vmacro12493' => 'vma', 'vmacro17322' => 'vma', 'vmacro21599' => 'vma', 'vmacro23041' => 'vma', 'VMungo0251G0004' => 'vmu', 'VMungo0251G2639' => 'vmu', 'VMungo0251G2967' => 'vmu', 'VMungo0540G0864' => 'vmu', 'VMungo0540G1569' => 'vmu', 'VMungo0647G0317' => 'vmu', 'VMungo0720G1373' => 'vmu', 'VMungo0720G1508' => 'vmu', 'VMungo1080G0485' => 'vmu', 'VMungo1215G3177' => 'vmu', 'Zm00001eb112600' => 'zma', 'Zm00001eb120220' => 'zma', 'Zm00001eb153240' => 'zma', 'Zm00001eb168880' => 'zma', 'Zm00001eb213920' => 'zma', 'Zm00001eb228280' => 'zma', 'Zm00001eb254580' => 'zma', 'Zm00001eb272180' => 'zma', 'Zm00001eb293190' => 'zma', 'Zm00001eb322930' => 'zma', 'Zm00001eb353360' => 'zma', 'Zm00001eb353390' => 'zma', 'Zm00001eb353430' => 'zma', 'Zm00001eb353440' => 'zma', 'Zm00001eb353780' => 'zma' ), 'gf_id' => 'HOM05D000499', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000499' ), 'data_identifier' => 'HOM05D000499', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000499', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1066', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p29780' => 'bna', 'A02p33180' => 'bna', 'A03p16470' => 'bna', 'A03p66010' => 'bna', 'A04p25970' => 'bna', 'A06p01270' => 'bna', 'A06p46080' => 'bna', 'A07p11400' => 'bna', 'A08p01840' => 'bna', 'A08p08230' => 'bna', 'A08p25740' => 'bna', 'A09p32070' => 'bna', 'A09p37830' => 'bna', 'A09p42840' => 'bna', 'A09p42850' => 'bna', 'Aa31LG10G2060' => 'aar', 'Aa31LG2G7410' => 'aar', 'Aa31LG6G10200' => 'aar', 'Aa31LG6G16680' => 'aar', 'Aa31LG6G8470' => 'aar', 'Aa31LG9G12730' => 'aar', 'Aa31LG9G13680' => 'aar', 'Aa31LG9G14920' => 'aar', 'Aa31LG9G6650' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4977' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5467' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3254' => 'aag', 'Actinidia02578' => 'ach', 'Actinidia07693' => 'ach', 'Actinidia08413' => 'ach', 'Actinidia08414' => 'ach', 'Actinidia15289' => 'ach', 'Actinidia19871' => 'ach', 'Actinidia21475' => 'ach', 'Actinidia22576' => 'ach', 'Actinidia28327' => 'ach', 'Actinidia32491' => 'ach', 'Actinidia39463' => 'ach', 'Actinidia39571' => 'ach', 'Ah.01g013750' => 'amhyb', 'Ah.01g023210' => 'amhyb', 'Ah.04g164850' => 'amhyb', 'Ah.05g178060' => 'amhyb', 'Ah.07g204270' => 'amhyb', 'Ah.07g208480' => 'amhyb', 'Ah.09g237410' => 'amhyb', 'Ah.14g089460' => 'amhyb', 'AL1G41790' => 'aly', 'AL1G49050' => 'aly', 'AL1G53810' => 'aly', 'AL1G61400' => 'aly', 'AL4G18580' => 'aly', 'AL5G12510' => 'aly', 'AL5G12540' => 'aly', 'AL6G43230' => 'aly', 'AL7G10370' => 'aly', 'AL7G19250' => 'aly', 'AL8G12240' => 'aly', 'AL8G18540' => 'aly', 'Aqoxy1G02409' => 'aox', 'Aqoxy2G03993' => 'aox', 'Aqoxy3G03357' => 'aox', 'Aqoxy4G00785' => 'aox', 'Aqoxy5G02598' => 'aox', 'Aqoxy6G00132' => 'aox', 'Aqoxy7G01776' => 'aox', 'Aqoxy7G02316' => 'aox', 'Aqoxy7G03973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.12AFKW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B8730' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27IQR1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3F75VG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3RE0GA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41TCQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.527VTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FIR39' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5W8UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DA38EV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ63HS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H1I32C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HC27T5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4M8AP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7N3CZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9UVDZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LS1NQA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT1D4B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SKC4TM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCFV76' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF9Q1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQWD9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1ZM88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WE07RT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YCK7VH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJE6Q6' => 'arhy', 'AT1G28240' => 'ath', 'AT1G34550' => 'ath', 'AT1G53040' => 'ath', 'AT2G02910' => 'ath', 'AT4G09630' => 'ath', 'AT4G38500' => 'ath', 'AT5G42660' => 'ath', 'AT5G46220' => 'ath', 'ATR0152G026' => 'atr', 'ATR0564G343' => 'atr', 'ATR0706G151' => 'atr', 'ATR0733G207' => 'atr', 'ATR0751G234' => 'atr', 'ATR0807G048' => 'atr', 'ATR1091G084' => 'atr', 'Atru.chr10.1229' => 'acertr', 'Atru.chr10.1230' => 'acertr', 'Atru.chr10.1874' => 'acertr', 'Atru.chr11.1808' => 'acertr', 'Atru.chr13.1795' => 'acertr', 'Atru.chr13.570' => 'acertr', 'Atru.chr2.2608' => 'acertr', 'Atru.chr2.2609' => 'acertr', 'Atru.chr5.3428' => 'acertr', 'Atru.chr8.1171' => 'acertr', 'AUR62004651' => 'cqu', 'AUR62008675' => 'cqu', 'AUR62010014' => 'cqu', 'AUR62013004' => 'cqu', 'AUR62014825' => 'cqu', 'AUR62015015' => 'cqu', 'AUR62015151' => 'cqu', 'AUR62017020' => 'cqu', 'AUR62019422' => 'cqu', 'AUR62023570' => 'cqu', 'AUR62025571' => 'cqu', 'AUR62029098' => 'cqu', 'AUR62033863' => 'cqu', 'AUR62034296' => 'cqu', 'AUR62040075' => 'cqu', 'BcaB02g07334' => 'bca', 'BcaB02g10575' => 'bca', 'BcaB03g12119' => 'bca', 'BcaB03g12120' => 'bca', 'BcaB03g13945' => 'bca', 'BcaB04g17123' => 'bca', 'BcaB04g17867' => 'bca', 'BcaB04g19839' => 'bca', 'BcaB07g30317' => 'bca', 'BcaB07g32432' => 'bca', 'BcaB07g33362' => 'bca', 'BcaB08g36611' => 'bca', 'BcaC01g00028' => 'bca', 'BcaC01g01356' => 'bca', 'BcaC01g02034' => 'bca', 'BcaC01g06051' => 'bca', 'BcaC03g16839' => 'bca', 'BcaC03g17176' => 'bca', 'BcaC05g26829' => 'bca', 'BcaC06g31490' => 'bca', 'BcaC06g35344' => 'bca', 'BcaC06g36570' => 'bca', 'BcaC07g37537' => 'bca', 'BcaC08g43491' => 'bca', 'BcaC08g43773' => 'bca', 'BcaNung00234' => 'bca', 'BcaNung01982' => 'bca', 'BcaNung03707' => 'bca', 'BcaNung06454' => 'bca', 'BolC2t10762H' => 'bol', 'BolC2t11191H' => 'bol', 'BolC3t14322H' => 'bol', 'BolC3t19747H' => 'bol', 'BolC3t21425H' => 'bol', 'BolC4t27800H' => 'bol', 'BolC5t31423H' => 'bol', 'BolC6t35951H' => 'bol', 'BolC6t36282H' => 'bol', 'BolC7t40678H' => 'bol', 'BolC7t40679H' => 'bol', 'BolC7t42222H' => 'bol', 'BolC7t43492H' => 'bol', 'BolC7t46785H' => 'bol', 'BolC8t47853H' => 'bol', 'BolC9t56805H' => 'bol', 'BraA02t08000Z' => 'bra', 'BraA02t08341Z' => 'bra', 'BraA03t10936Z' => 'bra', 'BraA03t15657Z' => 'bra', 'BraA04t18100Z' => 'bra', 'BraA05t20523Z' => 'bra', 'BraA06t23353Z' => 'bra', 'BraA06t27473Z' => 'bra', 'BraA06t27769Z' => 'bra', 'BraA07t28928Z' => 'bra', 'BraA08t32236Z' => 'bra', 'BraA08t32841Z' => 'bra', 'BraA08t34524Z' => 'bra', 'BraA09t38742Z' => 'bra', 'BraA09t39295Z' => 'bra', 'C02p47180' => 'bna', 'C02p50990' => 'bna', 'C03p19360' => 'bna', 'C03p74950' => 'bna', 'C03p91000' => 'bna', 'C04p63260' => 'bna', 'C05p27050' => 'bna', 'C06p08750' => 'bna', 'C06p11490' => 'bna', 'C07p02820' => 'bna', 'C07p17180' => 'bna', 'C07p29440' => 'bna', 'C07p63730' => 'bna', 'C09p39260' => 'bna', 'CAN.G1164.34' => 'can', 'CAN.G1164.39' => 'can', 'CAN.G1530.3' => 'can', 'CAN.G162.61' => 'can', 'CAN.G176.6' => 'can', 'CAN.G289.49' => 'can', 'CAN.G370.21' => 'can', 'CAN.G370.22' => 'can', 'CAN.G371.117' => 'can', 'CAN.G58.37' => 'can', 'CAN.G588.98' => 'can', 'CANSAT21G2266' => 'cansat', 'CANSAT25G2799' => 'cansat', 'CANSAT35G0862' => 'cansat', 'CANSAT35G1704' => 'cansat', 'CANSAT35G1760' => 'cansat', 'CANSAT56G3971' => 'cansat', 'CANSAT56G4116' => 'cansat', 'CANSAT80G1259' => 'cansat', 'CARHR027730' => 'chi', 'CARHR033880' => 'chi', 'CARHR043270' => 'chi', 'CARHR145330' => 'chi', 'CARHR145340' => 'chi', 'CARHR175570' => 'chi', 'CARHR181570' => 'chi', 'CARHR258470' => 'chi', 'CARHR260490' => 'chi', 'CARHR294220' => 'chi', 'Carub.0001s2668' => 'cru', 'Carub.0001s3257' => 'cru', 'Carub.0001s4220' => 'cru', 'Carub.0005s0179' => 'cru', 'Carub.0006s2807' => 'cru', 'Carub.0007s0039' => 'cru', 'Carub.0008s0169' => 'cru', 'Carub.0008s0636' => 'cru', 'Ca_00338_v3' => 'car', 'Ca_00542_v3' => 'car', 'Ca_01844_v3' => 'car', 'Ca_10611_v3' => 'car', 'Ca_13326_v3' => 'car', 'Ca_17944_v3' => 'car', 'Ca_18546_v3' => 'car', 'Ca_24219_v3' => 'car', 'Ca_29972_v3' => 'car', 'CBR_g3681' => 'cbr', 'CBR_g40021' => 'cbr', 'Cc01_g08140' => 'ccan', 'Cc02_g13410' => 'ccan', 'Cc02_g37480' => 'ccan', 'Cc05_g12030' => 'ccan', 'Cc09_g03370' => 'ccan', 'Cc09_g10300' => 'ccan', 'Cc10_g03530' => 'ccan', 'Cc10_g11380' => 'ccan', 'CDE01G0176' => 'cde', 'CDE02G0675' => 'cde', 'CDE02G0942' => 'cde', 'CDE02G1153' => 'cde', 'CDE02G4177' => 'cde', 'CDE04G2117' => 'cde', 'CDE04G2736' => 'cde', 'CDE08G1161' => 'cde', 'CDE09G1238' => 'cde', 'Cfa000467' => 'cfa', 'Cfa000947' => 'cfa', 'Cfa004969' => 'cfa', 'Cfa005284' => 'cfa', 'Cfa008993' => 'cfa', 'Cfa018187' => 'cfa', 'Cfa018454' => 'cfa', 'Cfa020585' => 'cfa', 'Ciclev10000424m.g' => 'ccl', 'Ciclev10003605m.g' => 'ccl', 'Ciclev10007828m.g' => 'ccl', 'Ciclev10014620m.g' => 'ccl', 'Ciclev10015169m.g' => 'ccl', 'Ciclev10018291m.g' => 'ccl', 'Ciclev10028256m.g' => 'ccl', 'Ciclev10033822m.g' => 'ccl', 'CiPaw.05G060300' => 'cil', 'CiPaw.05G085000' => 'cil', 'CiPaw.06G083700' => 'cil', 'CiPaw.06G120300' => 'cil', 'CiPaw.09G060500' => 'cil', 'CiPaw.09G123800' => 'cil', 'CiPaw.11G169700' => 'cil', 'CiPaw.12G118300' => 'cil', 'CiPaw.15G071000' => 'cil', 'CiPaw.15G081900' => 'cil', 'ClCG01G024610' => 'cla', 'ClCG03G006070' => 'cla', 'ClCG05G019250' => 'cla', 'ClCG09G009500' => 'cla', 'ClCG11G008200' => 'cla', 'ClCG11G018080' => 'cla', 'COL.COLO4_17373' => 'col', 'COL.COLO4_22994' => 'col', 'COL.COLO4_26389' => 'col', 'COL.COLO4_27170' => 'col', 'COL.COLO4_31074' => 'col', 'COL.COLO4_31465' => 'col', 'COL.COLO4_36438' => 'col', 'COL.COLO4_36439' => 'col', 'Cpa.g.c38781' => 'cpa', 'Cpa.g.sc128.12' => 'cpa', 'Cpa.g.sc166.7' => 'cpa', 'Cpa.g.sc166.8' => 'cpa', 'Cpa.g.sc20.111' => 'cpa', 'Cpa.g.sc27.31' => 'cpa', 'Cpa.g.sc64.36' => 'cpa', 'Cpa.g.sc64.37' => 'cpa', 'Cpa.g.sc66.49' => 'cpa', 'Cpa.g.sc80.64' => 'cpa', 'CsaV3_1G012320' => 'csa', 'CsaV3_2G008480' => 'csa', 'CsaV3_2G033450' => 'csa', 'CsaV3_3G044830' => 'csa', 'CsaV3_4G033710' => 'csa', 'CsaV3_6G051730' => 'csa', 'CsaV3_7G025350' => 'csa', 'CSS0001067' => 'camsi', 'CSS0005996' => 'camsi', 'CSS0006590' => 'camsi', 'CSS0009673' => 'camsi', 'CSS0010201' => 'camsi', 'CSS0010549' => 'camsi', 'CSS0011364' => 'camsi', 'CSS0014473' => 'camsi', 'CSS0014961' => 'camsi', 'CSS0020191' => 'camsi', 'CSS0021165' => 'camsi', 'CSS0022306' => 'camsi', 'CSS0030591' => 'camsi', 'CSS0030696' => 'camsi', 'CSS0032653' => 'camsi', 'CSS0037487' => 'camsi', 'CSS0041102' => 'camsi', 'CSS0041261' => 'camsi', 'CSS0046246' => 'camsi', 'CSS0049256' => 'camsi', 'DCAR_004075' => 'dca', 'DCAR_011538' => 'dca', 'DCAR_019553' => 'dca', 'DCAR_020952' => 'dca', 'DCAR_021739' => 'dca', 'DCAR_027407' => 'dca', 'DCAR_027913' => 'dca', 'DCAR_028066' => 'dca', 'Dinv05899' => 'din', 'Dinv07563' => 'din', 'Dinv08010' => 'din', 'Dinv14125' => 'din', 'Dinv20172' => 'din', 'Dinv30743' => 'din', 'Dinv31229' => 'din', 'Dinv34162' => 'din', 'Dinv36028' => 'din', 'Dinv39368' => 'din', 'Dinv40565' => 'din', 'Dinv41706' => 'din', 'Duzib052G0089' => 'dzi', 'Duzib116G0641' => 'dzi', 'Duzib132G0069' => 'dzi', 'Duzib132G1219' => 'dzi', 'Duzib147G0278' => 'dzi', 'Duzib160G0480' => 'dzi', 'Duzib170G0661' => 'dzi', 'Duzib177G0591' => 'dzi', 'Duzib187G1353' => 'dzi', 'Duzib192G0858' => 'dzi', 'Duzib192G0883' => 'dzi', 'Duzib213G0506' => 'dzi', 'Duzib235G0289' => 'dzi', 'Duzib251G0422' => 'dzi', 'ECA232G3898' => 'eca', 'ECA233G5950' => 'eca', 'ECA234G1699' => 'eca', 'ECA234G2421' => 'eca', 'ECA236G0426' => 'eca', 'ECA236G4331' => 'eca', 'ECA248G2573' => 'eca', 'EL10Ac1g00077' => 'bvu', 'EL10Ac1g01746' => 'bvu', 'EL10Ac2g03464' => 'bvu', 'EL10Ac4g08176' => 'bvu', 'EL10Ac7g17521' => 'bvu', 'EL10Ac8g20386' => 'bvu', 'EL10Ac9g21343' => 'bvu', 'EL10Ac9g22688' => 'bvu', 'Eucgr.B03434' => 'egr', 'Eucgr.D00618' => 'egr', 'Eucgr.E02395' => 'egr', 'Eucgr.F01129' => 'egr', 'Eucgr.F02622' => 'egr', 'Eucgr.F04207' => 'egr', 'FAN01G0570' => 'fan', 'FAN03G3351' => 'fan', 'FAN06G3702' => 'fan', 'FAN07G2149' => 'fan', 'FAN10G3758' => 'fan', 'FAN11G1170' => 'fan', 'FAN11G2050' => 'fan', 'FAN11G2724' => 'fan', 'FAN12G1700' => 'fan', 'FAN12G2028' => 'fan', 'FAN15G1160' => 'fan', 'FAN15G3063' => 'fan', 'FAN16G2540' => 'fan', 'FAN16G3077' => 'fan', 'FAN16G3624' => 'fan', 'FAN17G0221' => 'fan', 'FAN20G2492' => 'fan', 'FAN20G2905' => 'fan', 'FAN21G0548' => 'fan', 'FAN21G1300' => 'fan', 'FAN22G0077' => 'fan', 'FAN22G1315' => 'fan', 'FAN24G1280' => 'fan', 'FAN24G1445' => 'fan', 'FAN24G3527' => 'fan', 'FAN25G0464' => 'fan', 'FAN25G2885' => 'fan', 'FAN25G3270' => 'fan', 'FAN27G1101' => 'fan', 'FAN27G2846' => 'fan', 'FAN27G3524' => 'fan', 'FvH4_2g11770' => 'fve', 'FvH4_2g15630' => 'fve', 'FvH4_3g05570' => 'fve', 'FvH4_3g09110' => 'fve', 'FvH4_3g19940' => 'fve', 'FvH4_4g04821' => 'fve', 'FvH4_4g31480' => 'fve', 'FvH4_7g01740' => 'fve', 'Glyma.05G130400' => 'gma', 'Glyma.05G156400' => 'gma', 'Glyma.07G197000' => 'gma', 'Glyma.08G085151' => 'gma', 'Glyma.08G114500' => 'gma', 'Glyma.08G300400' => 'gma', 'Glyma.10G215800' => 'gma', 'Glyma.12G224400' => 'gma', 'Glyma.13G179300' => 'gma', 'Glyma.13G218151' => 'gma', 'Glyma.13G238800' => 'gma', 'Glyma.13G276900' => 'gma', 'Glyma.14G078200' => 'gma', 'Glyma.15G074500' => 'gma', 'Glyma.15G094100' => 'gma', 'Glyma.17G247200' => 'gma', 'Glyma.18G120100' => 'gma', 'Glyma.20G176000' => 'gma', 'Gohir.A01G063600' => 'ghi', 'Gohir.A01G170301' => 'ghi', 'Gohir.A02G060500' => 'ghi', 'Gohir.A05G133850' => 'ghi', 'Gohir.A05G161400' => 'ghi', 'Gohir.A06G012900' => 'ghi', 'Gohir.A06G035901' => 'ghi', 'Gohir.A06G127100' => 'ghi', 'Gohir.A06G210500' => 'ghi', 'Gohir.A08G008650' => 'ghi', 'Gohir.A09G072700' => 'ghi', 'Gohir.A09G088301' => 'ghi', 'Gohir.A10G040600' => 'ghi', 'Gohir.A12G036300' => 'ghi', 'Gohir.A12G143350' => 'ghi', 'Gohir.A12G165500' => 'ghi', 'Gohir.A13G145700' => 'ghi', 'Gohir.D01G050000' => 'ghi', 'Gohir.D01G051366' => 'ghi', 'Gohir.D01G161350' => 'ghi', 'Gohir.D02G065900' => 'ghi', 'Gohir.D05G164200' => 'ghi', 'Gohir.D05G355500' => 'ghi', 'Gohir.D06G010400' => 'ghi', 'Gohir.D06G111250' => 'ghi', 'Gohir.D06G132000' => 'ghi', 'Gohir.D06G210500' => 'ghi', 'Gohir.D07G165675' => 'ghi', 'Gohir.D08G062240' => 'ghi', 'Gohir.D08G086101' => 'ghi', 'Gohir.D08G138060' => 'ghi', 'Gohir.D09G072300' => 'ghi', 'Gohir.D10G041400' => 'ghi', 'Gohir.D11G191020' => 'ghi', 'Gohir.D11G212066' => 'ghi', 'Gohir.D12G036300' => 'ghi', 'Gohir.D12G168600' => 'ghi', 'Gohir.D13G150600' => 'ghi', 'Gorai.001G057300' => 'gra', 'Gorai.002G069900' => 'gra', 'Gorai.002G200000' => 'gra', 'Gorai.003G067600' => 'gra', 'Gorai.005G074800' => 'gra', 'Gorai.006G087300' => 'gra', 'Gorai.008G037500' => 'gra', 'Gorai.008G181400' => 'gra', 'Gorai.009G169400' => 'gra', 'Gorai.009G387900' => 'gra', 'Gorai.010G013300' => 'gra', 'Gorai.010G153800' => 'gra', 'Gorai.010G255800' => 'gra', 'Gorai.011G043700' => 'gra', 'Gorai.011G198900' => 'gra', 'Gorai.013G168400' => 'gra', 'GSVIVG01005212001' => 'vvi', 'GSVIVG01006163001' => 'vvi', 'GSVIVG01009625001' => 'vvi', 'GSVIVG01014338001' => 'vvi', 'GSVIVG01020005001' => 'vvi', 'GSVIVG01021450001' => 'vvi', 'GSVIVG01023975001' => 'vvi', 'GSVIVG01034490001' => 'vvi', 'HanXRQChr04g0112071' => 'han', 'HanXRQChr05g0131151' => 'han', 'HanXRQChr09g0262371' => 'han', 'HanXRQChr09g0268401' => 'han', 'HanXRQChr10g0279241' => 'han', 'HanXRQChr10g0297961' => 'han', 'HanXRQChr11g0326231' => 'han', 'HanXRQChr11g0328471' => 'han', 'HanXRQChr16g0507941' => 'han', 'HanXRQChr17g0560211' => 'han', 'Haze_02108' => 'cav', 'Haze_02428' => 'cav', 'Haze_05593' => 'cav', 'Haze_06448' => 'cav', 'Haze_09427' => 'cav', 'Haze_12022' => 'cav', 'Haze_17612' => 'cav', 'Haze_17928' => 'cav', 'Hma1.2p1_0032F.1_g019250' => 'hma', 'Hma1.2p1_0163F.1_g072690' => 'hma', 'Hma1.2p1_0265F.1_g106710' => 'hma', 'Hma1.2p1_0286F.1_g113970' => 'hma', 'Hma1.2p1_0363F.1_g136640' => 'hma', 'Hma1.2p1_0584F.1_g183470' => 'hma', 'Hma1.2p1_0885F.1_g232570' => 'hma', 'HPP92_006022' => 'vpl', 'HPP92_007320' => 'vpl', 'HPP92_011521' => 'vpl', 'HPP92_019387' => 'vpl', 'HPP92_024038' => 'vpl', 'Hund05891' => 'sun', 'Hund06450' => 'sun', 'Hund12053' => 'sun', 'Hund16800' => 'sun', 'Hund21222' => 'sun', 'Hund22896' => 'sun', 'Hund23746' => 'sun', 'Hund27083' => 'sun', 'Lalb_Chr02g0141831' => 'lal', 'Lalb_Chr02g0141841' => 'lal', 'Lalb_Chr05g0220411' => 'lal', 'Lalb_Chr06g0162081' => 'lal', 'Lalb_Chr09g0327651' => 'lal', 'Lalb_Chr13g0295051' => 'lal', 'Lalb_Chr15g0086801' => 'lal', 'Lalb_Chr16g0383781' => 'lal', 'Lalb_Chr16g0383791' => 'lal', 'Lalb_Chr18g0055441' => 'lal', 'Lalb_Chr18g0059611' => 'lal', 'Lalb_Chr20g0109661' => 'lal', 'Lalb_Chr20g0109831' => 'lal', 'Lalb_Chr20g0121871' => 'lal', 'Lalb_Chr22g0355361' => 'lal', 'Lalb_Chr25g0286371' => 'lal', 'Lj1A1187G43' => 'lonja', 'Lj1A1205T50' => 'lonja', 'Lj1A800G33' => 'lonja', 'Lj1C1187T7' => 'lonja', 'Lj1C843T11' => 'lonja', 'Lj1g0010940' => 'lja', 'Lj2A288T69' => 'lonja', 'Lj3g0024276' => 'lja', 'Lj4A47T76' => 'lonja', 'Lj4g0005805' => 'lja', 'Lj4g0006097' => 'lja', 'Lj4g0008528' => 'lja', 'Lj4g0024907' => 'lja', 'Lj5g0012472' => 'lja', 'Lj5g0018648' => 'lja', 'Lj6C789G1' => 'lonja', 'Lj6g0004000' => 'lja', 'Lj7A292G67' => 'lonja', 'Lj7A292T64' => 'lonja', 'Lj9A400T58' => 'lonja', 'Lsat_1_v5_gn_1_126181' => 'lsa', 'Lsat_1_v5_gn_4_123041' => 'lsa', 'Lsat_1_v5_gn_4_133620' => 'lsa', 'Lsat_1_v5_gn_4_53221' => 'lsa', 'Lsat_1_v5_gn_4_71961' => 'lsa', 'Lsat_1_v5_gn_7_105241' => 'lsa', 'Lsat_1_v5_gn_7_21361' => 'lsa', 'Lsat_1_v5_gn_7_28860' => 'lsa', 'Lsat_1_v5_gn_7_31260' => 'lsa', 'Lsat_1_v5_gn_8_52801' => 'lsa', 'Manes.02G191400' => 'mes', 'Manes.03G110100' => 'mes', 'Manes.04G071100' => 'mes', 'Manes.05G100500' => 'mes', 'Manes.05G164700' => 'mes', 'Manes.15G087000' => 'mes', 'Manes.15G121500' => 'mes', 'Manes.16G028300' => 'mes', 'Manes.17G046100' => 'mes', 'Manes.17G069800' => 'mes', 'Manes.18G100500' => 'mes', 'Mapoly0002s0109' => 'mpo', 'Mapoly0024s0007' => 'mpo', 'Mapoly0089s0032' => 'mpo', 'MBI04_g42241_MAGBIO' => 'mbi', 'MBI05_g11988_MAGBIO' => 'mbi', 'MBI05_g35452_MAGBIO' => 'mbi', 'MBI07_g30179_MAGBIO' => 'mbi', 'MBI07_g35859_MAGBIO' => 'mbi', 'MBI07_g35860_MAGBIO' => 'mbi', 'MBI07_g37166_MAGBIO' => 'mbi', 'MBI08_g18172_MAGBIO' => 'mbi', 'MBI09_g08441_MAGBIO' => 'mbi', 'MBI13_g01676_MAGBIO' => 'mbi', 'MBI14_g42955_MAGBIO' => 'mbi', 'MBI16_g13161_MAGBIO' => 'mbi', 'MBI17_g27204_MAGBIO' => 'mbi', 'MBI19_g21595_MAGBIO' => 'mbi', 'MD00G1148400' => 'mdo', 'MD02G1301200' => 'mdo', 'MD03G1227800' => 'mdo', 'MD05G1041100' => 'mdo', 'MD05G1124800' => 'mdo', 'MD05G1284000' => 'mdo', 'MD05G1338800' => 'mdo', 'MD05G1338900' => 'mdo', 'MD07G1022800' => 'mdo', 'MD10G1047500' => 'mdo', 'MD10G1127500' => 'mdo', 'MD10G1262300' => 'mdo', 'MD10G1293800' => 'mdo', 'MD16G1074300' => 'mdo', 'Medtr1g021670' => 'mtr', 'Medtr1g096320' => 'mtr', 'Medtr2g013690' => 'mtr', 'Medtr2g019450' => 'mtr', 'Medtr2g085170' => 'mtr', 'Medtr4g088785' => 'mtr', 'Medtr8g055930' => 'mtr', 'Medtr8g085850' => 'mtr', 'MELO3C002605.2' => 'cme', 'MELO3C003891.2' => 'cme', 'MELO3C004012.2' => 'cme', 'MELO3C007134.2' => 'cme', 'MELO3C008118.2' => 'cme', 'MELO3C016700.2' => 'cme', 'MELO3C024127.2' => 'cme', 'MELO3C033361.2' => 'cme', 'MELO3C033362.2' => 'cme', 'Migut.C00430' => 'egut', 'Migut.C01246' => 'egut', 'Migut.E00101' => 'egut', 'Migut.H01486' => 'egut', 'Migut.H01939' => 'egut', 'Migut.K00360' => 'egut', 'Migut.M00910' => 'egut', 'Migut.M01139' => 'egut', 'Migut.N02677' => 'egut', 'MSTRG.13252' => 'ama', 'MSTRG.14701' => 'ama', 'MSTRG.1521' => 'ama', 'MSTRG.15884' => 'ama', 'MSTRG.16242' => 'ama', 'MSTRG.22285' => 'ama', 'MSTRG.22444' => 'ama', 'MSTRG.2349' => 'ama', 'MSTRG.26308' => 'ama', 'MSTRG.28296' => 'ama', 'MSTRG.9895' => 'ama', 'Nitab4.5_0000110g0060' => 'nta', 'Nitab4.5_0000420g0130' => 'nta', 'Nitab4.5_0000422g0030' => 'nta', 'Nitab4.5_0000560g0180' => 'nta', 'Nitab4.5_0000703g0100' => 'nta', 'Nitab4.5_0000786g0200' => 'nta', 'Nitab4.5_0001336g0020' => 'nta', 'Nitab4.5_0001796g0030' => 'nta', 'Nitab4.5_0003348g0060' => 'nta', 'Nitab4.5_0003698g0040' => 'nta', 'Nitab4.5_0003942g0090' => 'nta', 'Nitab4.5_0004775g0070' => 'nta', 'Nitab4.5_0004864g0030' => 'nta', 'Nitab4.5_0005615g0020' => 'nta', 'Nitab4.5_0009288g0030' => 'nta', 'Nitab4.5_0009341g0010' => 'nta', 'Nitab4.5_0009535g0010' => 'nta', 'Nn1g03995' => 'nnu', 'Nn1g04100' => 'nnu', 'Nn1g06530' => 'nnu', 'Nn3g16404' => 'nnu', 'Nn3g17212' => 'nnu', 'Nn3g20776' => 'nnu', 'Nn3g21923' => 'nnu', 'Nn5g27737' => 'nnu', 'Nn5g29461' => 'nnu', 'Nn7g38355' => 'nnu', 'Nn8g39873' => 'nnu', 'Oeu000548.2' => 'oeu', 'Oeu004672.1' => 'oeu', 'Oeu015605.2' => 'oeu', 'Oeu016092.1' => 'oeu', 'Oeu017879.3' => 'oeu', 'Oeu024910.1' => 'oeu', 'Oeu028965.1' => 'oeu', 'Oeu031269.1' => 'oeu', 'Oeu031270.1' => 'oeu', 'Oeu032535.1' => 'oeu', 'Oeu034151.1' => 'oeu', 'Oeu034152.1' => 'oeu', 'Oeu034588.2' => 'oeu', 'Oeu050846.1' => 'oeu', 'Oeu050849.2' => 'oeu', 'Oeu051063.2' => 'oeu', 'Oeu052368.1' => 'oeu', 'Oeu052370.1' => 'oeu', 'Os01g0210400' => 'osa', 'Os01g0304300' => 'osa', 'Os01g0749100' => 'osa', 'Os02g0745800' => 'osa', 'Os03g0769050' => 'osa', 'Os05g0531500' => 'osa', 'Os06g0724300' => 'osa', 'Os11g0198100' => 'osa', 'Peaxi162Scf00069g01425' => 'pax', 'Peaxi162Scf00280g00811' => 'pax', 'Peaxi162Scf00310g00615' => 'pax', 'Peaxi162Scf00362g00542' => 'pax', 'Peaxi162Scf00461g00310' => 'pax', 'Peaxi162Scf00530g00118' => 'pax', 'Peaxi162Scf00541g00057' => 'pax', 'Peaxi162Scf00661g00017' => 'pax', 'Peaxi162Scf00926g00027' => 'pax', 'Peaxi162Scf01064g00263' => 'pax', 'Peaxi162Scf01211g00135' => 'pax', 'PGR004G2336' => 'pgr', 'PGR042G0327' => 'pgr', 'PGR042G1957' => 'pgr', 'PGR042G2003' => 'pgr', 'PGR042G3929' => 'pgr', 'PGR083G1137' => 'pgr', 'PGR083G1364' => 'pgr', 'PGSC0003DMG400003381' => 'stu', 'PGSC0003DMG400003417' => 'stu', 'PGSC0003DMG400008981' => 'stu', 'PGSC0003DMG400012417' => 'stu', 'PGSC0003DMG400012823' => 'stu', 'PGSC0003DMG400016885' => 'stu', 'PGSC0003DMG400022812' => 'stu', 'PGSC0003DMG400029726' => 'stu', 'PGSC0003DMG401009243' => 'stu', 'PGSC0003DMG401031505' => 'stu', 'PGSC0003DMG402031505' => 'stu', 'Phvul.001G017600' => 'pvu', 'Phvul.002G193500' => 'pvu', 'Phvul.002G228900' => 'pvu', 'Phvul.002G236800' => 'pvu', 'Phvul.003G049500' => 'pvu', 'Phvul.005G072000' => 'pvu', 'Phvul.006G164800' => 'pvu', 'Phvul.006G185100' => 'pvu', 'Phvul.007G090000' => 'pvu', 'Potri.001G399800' => 'ptr', 'Potri.002G149900' => 'ptr', 'Potri.004G044100' => 'ptr', 'Potri.004G177600' => 'ptr', 'Potri.009G138000' => 'ptr', 'Potri.010G094000' => 'ptr', 'Potri.011G053000' => 'ptr', 'Potri.011G119300' => 'ptr', 'Potri.013G113700' => 'ptr', 'Potri.018G107800' => 'ptr', 'Potri.019G084100' => 'ptr', 'Pp3c14_23720' => 'ppa', 'Pp3c16_6340' => 'ppa', 'Pp3c23_13420' => 'ppa', 'Pp3c24_2740' => 'ppa', 'Pp3c25_860' => 'ppa', 'Pp3c8_21750' => 'ppa', 'Prupe.1G273000' => 'ppe', 'Prupe.1G273700' => 'ppe', 'Prupe.1G274100' => 'ppe', 'Prupe.2G023300' => 'ppe', 'Prupe.4G048000' => 'ppe', 'Prupe.4G080400' => 'ppe', 'Prupe.4G181200' => 'ppe', 'Prupe.8G056900' => 'ppe', 'Prupe.8G168700' => 'ppe', 'Psat1g189080' => 'psa', 'Psat1g204760' => 'psa', 'Psat4g175560' => 'psa', 'Psat4g177720' => 'psa', 'Psat5g244240' => 'psa', 'Psat6g010720' => 'psa', 'Psat6g187200' => 'psa', 'Psat7g072040' => 'psa', 'PSO017G3501' => 'pso', 'PSO063G2148' => 'pso', 'PSO063G5608' => 'pso', 'PSO210G6392' => 'pso', 'PSO541G2319' => 'pso', 'PSO541G2836' => 'pso', 'PSO541G4012' => 'pso', 'PSO541G6253' => 'pso', 'PSO675G0580' => 'pso', 'PSO675G0856' => 'pso', 'PSO675G5635' => 'pso', 'PSO675G9157' => 'pso', 'PSO832G1660' => 'pso', 'PSO832G1969' => 'pso', 'QL02p007186' => 'qlo', 'QL02p033904' => 'qlo', 'QL03p064391' => 'qlo', 'QL05p040593' => 'qlo', 'QL05p058242' => 'qlo', 'QL08p021825' => 'qlo', 'QL11p004981' => 'qlo', 'RcHm_v2.0_Chr1g0318301' => 'rch', 'RcHm_v2.0_Chr4g0418501' => 'rch', 'RcHm_v2.0_Chr4g0439971' => 'rch', 'RcHm_v2.0_Chr5g0008541' => 'rch', 'RcHm_v2.0_Chr5g0014101' => 'rch', 'RcHm_v2.0_Chr5g0014131' => 'rch', 'RcHm_v2.0_Chr5g0033621' => 'rch', 'RcHm_v2.0_Chr6g0272041' => 'rch', 'RcHm_v2.0_Chr6g0278831' => 'rch', 'Rhsim02G0130400' => 'rsi', 'Rhsim02G0171100' => 'rsi', 'Rhsim05G0053000' => 'rsi', 'Rhsim05G0053100' => 'rsi', 'Rhsim06G0096500' => 'rsi', 'Rhsim06G0096600' => 'rsi', 'Rhsim06G0199100' => 'rsi', 'Rhsim12G0062300' => 'rsi', 'Rhsim12G0062800' => 'rsi', 'Sabra02G0118600' => 'sbr', 'Sabra04G0027300' => 'sbr', 'Sabra04G0119500' => 'sbr', 'Sabra08G0112500' => 'sbr', 'Sabra11G0036800' => 'sbr', 'Sabra11G0103800' => 'sbr', 'Sabra13G0096300' => 'sbr', 'Sabra16G0262300' => 'sbr', 'Sabra18G0091700' => 'sbr', 'Sabra19G0095400' => 'sbr', 'SalBow6G3080' => 'sbo', 'SalBow7G1157' => 'sbo', 'SalBow7G2123' => 'sbo', 'SalBow7G2285' => 'sbo', 'SalBow7G3537' => 'sbo', 'SalBow8G2947' => 'sbo', 'SalBow8G4463' => 'sbo', 'SalBow8G5466' => 'sbo', 'Sc01g0001750' => 'sci', 'Sc02g0006640' => 'sci', 'Sc02g0006670' => 'sci', 'Sc04g0008220' => 'sci', 'Sc05g0006190' => 'sci', 'Sc08g0002760' => 'sci', 'Sc17g0006170' => 'sci', 'Sc22g0002050' => 'sci', 'Sc23g0001190' => 'sci', 'Sc24g0000980' => 'sci', 'Sed0006245' => 'sed', 'Sed0007543' => 'sed', 'Sed0009411' => 'sed', 'Sed0010765' => 'sed', 'Sed0012944' => 'sed', 'Sed0014682' => 'sed', 'Sed0016174' => 'sed', 'Sed0016796' => 'sed', 'Sed0020317' => 'sed', 'Sed0021467' => 'sed', 'SEGI_01316' => 'sgi', 'SEGI_03374' => 'sgi', 'SEGI_16265' => 'sgi', 'SEGI_18569' => 'sgi', 'SEGI_20351' => 'sgi', 'SEGI_26395' => 'sgi', 'SEGI_29469' => 'sgi', 'SEGI_34771' => 'sgi', 'SEGI_36769' => 'sgi', 'SEGI_37139' => 'sgi', 'SGA_v2.0_scaffold100G29687' => 'sas', 'SGA_v2.0_scaffold118G32472' => 'sas', 'SGA_v2.0_scaffold14G07051' => 'sas', 'SGA_v2.0_scaffold183G39845' => 'sas', 'SGA_v2.0_scaffold1G00174' => 'sas', 'SGA_v2.0_scaffold22G09714' => 'sas', 'SGA_v2.0_scaffold333G48992' => 'sas', 'SGA_v2.0_scaffold46G17491' => 'sas', 'SGA_v2.0_scaffold49G18294' => 'sas', 'SGA_v2.0_scaffold63G21658' => 'sas', 'SHI01741' => 'shi', 'SHI05771' => 'shi', 'SHI18077' => 'shi', 'SHI20525' => 'shi', 'SHI20527' => 'shi', 'SHI20528' => 'shi', 'SMO172G0185' => 'smo', 'SMO198G0020' => 'smo', 'SMO351G0006' => 'smo', 'SMO356G0118' => 'smo', 'SMO358G0296' => 'smo', 'SMO367G0079' => 'smo', 'SMO367G1277' => 'smo', 'Solyc01g014220.3' => 'sly', 'Solyc01g111770.2' => 'sly', 'Solyc02g078180.3' => 'sly', 'Solyc03g006430.3' => 'sly', 'Solyc03g006456.1' => 'sly', 'Solyc03g079860.2' => 'sly', 'Solyc04g079770.3' => 'sly', 'Solyc05g007430.4' => 'sly', 'Solyc07g063150.3' => 'sly', 'Solyc08g016620.3' => 'sly', 'Solyc09g057590.3' => 'sly', 'Solyc09g057600.1' => 'sly', 'Solyc10g009050.3' => 'sly', 'Solyc11g017420.2' => 'sly', 'Sopen01g053810' => 'spe', 'Sopen02g023040' => 'spe', 'Sopen03g002440' => 'spe', 'Sopen04g033350' => 'spe', 'Sopen05g003310' => 'spe', 'Sopen07g004050' => 'spe', 'Sopen07g031340' => 'spe', 'Sopen08g006990' => 'spe', 'Sopen10g004830' => 'spe', 'Sopen11g009370' => 'spe', 'Sp1g24450' => 'spa', 'Sp1g29670' => 'spa', 'Sp1g39600' => 'spa', 'Sp2g11080' => 'spa', 'Sp2g13970' => 'spa', 'Sp4g16130' => 'spa', 'Sp6g13080' => 'spa', 'Sp7g37270' => 'spa', 'TAR371G0065' => 'tar', 'TAR376G0340' => 'tar', 'TAR376G0435' => 'tar', 'TAR381G0002' => 'tar', 'TAR381G1236' => 'tar', 'TAR624G0055' => 'tar', 'TAR624G0324' => 'tar', 'TAR624G0696' => 'tar', 'TAR624G0906' => 'tar', 'TAR625G0107' => 'tar', 'TAR626G0015' => 'tar', 'TAR626G1356' => 'tar', 'TAR627G0888' => 'tar', 'TAR628G0399' => 'tar', 'TAR628G1327' => 'tar', 'TAR629G2831' => 'tar', 'TAR629G2874' => 'tar', 'TAR633G1432' => 'tar', 'TAR633G2771' => 'tar', 'THA.LOC104803394' => 'tha', 'THA.LOC104805153' => 'tha', 'THA.LOC104806784' => 'tha', 'THA.LOC104810473' => 'tha', 'THA.LOC104813100' => 'tha', 'THA.LOC104814215' => 'tha', 'THA.LOC104815554' => 'tha', 'THA.LOC104820544' => 'tha', 'THA.LOC104824754' => 'tha', 'THA.LOC104827717' => 'tha', 'Thecc.02G031400' => 'tca', 'Thecc.02G055900' => 'tca', 'Thecc.02G350800' => 'tca', 'Thecc.06G150900' => 'tca', 'Thecc.06G186600' => 'tca', 'Thecc.07G089600' => 'tca', 'Thecc.08G020400' => 'tca', 'Thecc.08G182100' => 'tca', 'Thhalv10000873m.g' => 'esa', 'Thhalv10004185m.g' => 'esa', 'Thhalv10006981m.g' => 'esa', 'Thhalv10007204m.g' => 'esa', 'Thhalv10011374m.g' => 'esa', 'Thhalv10013482m.g' => 'esa', 'Thhalv10017801m.g' => 'esa', 'Thhalv10024983m.g' => 'esa', 'TPR.G12072' => 'tpr', 'TPR.G15769' => 'tpr', 'TPR.G16504' => 'tpr', 'TPR.G16506' => 'tpr', 'TPR.G24345' => 'tpr', 'TPR.G26666' => 'tpr', 'TPR.G27320' => 'tpr', 'TPR.G31819' => 'tpr', 'TPR.G38879' => 'tpr', 'TPR.G39015' => 'tpr', 'TPR.G8819' => 'tpr', 'TWI09G0924' => 'twi', 'TWI12G0811' => 'twi', 'TWI12G1294' => 'twi', 'TWI31G0150' => 'twi', 'TWI36G1262' => 'twi', 'TWI38G1287' => 'twi', 'TWI38G1633' => 'twi', 'TWI38G1982' => 'twi', 'TWI39G0116' => 'twi', 'TWI60G1011' => 'twi', 'TWI63G0171' => 'twi', 'TWI73G0839' => 'twi', 'TWI79G1511' => 'twi', 'unitig_0.g915' => 'ugi', 'unitig_0.g916' => 'ugi', 'unitig_21.g20219' => 'ugi', 'unitig_21.g20416' => 'ugi', 'unitig_578.g16132' => 'ugi', 'unitig_578.g16718' => 'ugi', 'unitig_62.g23481' => 'ugi', 'unitig_744.g24535' => 'ugi', 'unitig_749.g13525' => 'ugi', 'vmacro01248' => 'vma', 'vmacro02290' => 'vma', 'vmacro10946' => 'vma', 'vmacro11865' => 'vma', 'vmacro12493' => 'vma', 'vmacro17322' => 'vma', 'vmacro21599' => 'vma', 'vmacro23041' => 'vma', 'VMungo0251G0004' => 'vmu', 'VMungo0251G2639' => 'vmu', 'VMungo0251G2967' => 'vmu', 'VMungo0540G0864' => 'vmu', 'VMungo0540G1569' => 'vmu', 'VMungo0647G0317' => 'vmu', 'VMungo0720G1373' => 'vmu', 'VMungo0720G1508' => 'vmu', 'VMungo1080G0485' => 'vmu', 'VMungo1215G3177' => 'vmu', 'Zm00001eb112600' => 'zma', 'Zm00001eb120220' => 'zma', 'Zm00001eb153240' => 'zma', 'Zm00001eb168880' => 'zma', 'Zm00001eb213920' => 'zma', 'Zm00001eb228280' => 'zma', 'Zm00001eb254580' => 'zma', 'Zm00001eb272180' => 'zma', 'Zm00001eb293190' => 'zma', 'Zm00001eb322930' => 'zma', 'Zm00001eb353360' => 'zma', 'Zm00001eb353390' => 'zma', 'Zm00001eb353430' => 'zma', 'Zm00001eb353440' => 'zma', 'Zm00001eb353780' => 'zma' ) $gf_id = 'HOM05D000499' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000499' ) $data_identifier = 'HOM05D000499' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 29, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 12, 'amhyb' => (int) 8, 'aly' => (int) 12, 'aox' => (int) 9, 'arhy' => (int) 26, 'ath' => (int) 8, 'atr' => (int) 7, 'acertr' => (int) 10, 'cqu' => (int) 15, 'bca' => (int) 29, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 11, 'cansat' => (int) 8, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 9, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 8, 'cpa' => (int) 10, 'csa' => (int) 7, 'camsi' => (int) 20, 'dca' => (int) 8, 'din' => (int) 12, 'dzi' => (int) 14, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 6, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 38, 'gra' => (int) 16, 'vvi' => (int) 8, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 5, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 11, 'lja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 11, 'mpo' => (int) 3, 'mbi' => (int) 14, 'mdo' => (int) 14, 'mtr' => (int) 8, 'cme' => (int) 9, 'egut' => (int) 9, 'ama' => (int) 11, 'nta' => (int) 17, 'nnu' => (int) 11, 'oeu' => (int) 18, 'osa' => (int) 8, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 6, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 9, 'rsi' => (int) 9, 'sbr' => (int) 10, 'sbo' => (int) 8, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 10, 'sas' => (int) 10, 'shi' => (int) 6, 'smo' => (int) 7, 'sly' => (int) 14, 'spe' => (int) 10, 'spa' => (int) 8, 'tar' => (int) 19, 'tha' => (int) 10, 'tca' => (int) 8, 'esa' => (int) 8, 'tpr' => (int) 11, 'twi' => (int) 13, 'ugi' => (int) 9, 'vma' => (int) 8, 'vmu' => (int) 10, 'zma' => (int) 15 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb353780' $species_info = array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ) $local_species = 'bra' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000499', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1066', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p29780' => 'bna', 'A02p33180' => 'bna', 'A03p16470' => 'bna', 'A03p66010' => 'bna', 'A04p25970' => 'bna', 'A06p01270' => 'bna', 'A06p46080' => 'bna', 'A07p11400' => 'bna', 'A08p01840' => 'bna', 'A08p08230' => 'bna', 'A08p25740' => 'bna', 'A09p32070' => 'bna', 'A09p37830' => 'bna', 'A09p42840' => 'bna', 'A09p42850' => 'bna', 'Aa31LG10G2060' => 'aar', 'Aa31LG2G7410' => 'aar', 'Aa31LG6G10200' => 'aar', 'Aa31LG6G16680' => 'aar', 'Aa31LG6G8470' => 'aar', 'Aa31LG9G12730' => 'aar', 'Aa31LG9G13680' => 'aar', 'Aa31LG9G14920' => 'aar', 'Aa31LG9G6650' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4977' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5467' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3254' => 'aag', 'Actinidia02578' => 'ach', 'Actinidia07693' => 'ach', 'Actinidia08413' => 'ach', 'Actinidia08414' => 'ach', 'Actinidia15289' => 'ach', 'Actinidia19871' => 'ach', 'Actinidia21475' => 'ach', 'Actinidia22576' => 'ach', 'Actinidia28327' => 'ach', 'Actinidia32491' => 'ach', 'Actinidia39463' => 'ach', 'Actinidia39571' => 'ach', 'Ah.01g013750' => 'amhyb', 'Ah.01g023210' => 'amhyb', 'Ah.04g164850' => 'amhyb', 'Ah.05g178060' => 'amhyb', 'Ah.07g204270' => 'amhyb', 'Ah.07g208480' => 'amhyb', 'Ah.09g237410' => 'amhyb', 'Ah.14g089460' => 'amhyb', 'AL1G41790' => 'aly', 'AL1G49050' => 'aly', 'AL1G53810' => 'aly', 'AL1G61400' => 'aly', 'AL4G18580' => 'aly', 'AL5G12510' => 'aly', 'AL5G12540' => 'aly', 'AL6G43230' => 'aly', 'AL7G10370' => 'aly', 'AL7G19250' => 'aly', 'AL8G12240' => 'aly', 'AL8G18540' => 'aly', 'Aqoxy1G02409' => 'aox', 'Aqoxy2G03993' => 'aox', 'Aqoxy3G03357' => 'aox', 'Aqoxy4G00785' => 'aox', 'Aqoxy5G02598' => 'aox', 'Aqoxy6G00132' => 'aox', 'Aqoxy7G01776' => 'aox', 'Aqoxy7G02316' => 'aox', 'Aqoxy7G03973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.12AFKW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B8730' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27IQR1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3F75VG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3RE0GA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41TCQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.527VTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FIR39' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5W8UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DA38EV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ63HS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H1I32C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HC27T5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4M8AP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7N3CZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9UVDZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LS1NQA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT1D4B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SKC4TM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCFV76' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF9Q1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQWD9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1ZM88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WE07RT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YCK7VH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJE6Q6' => 'arhy', 'AT1G28240' => 'ath', 'AT1G34550' => 'ath', 'AT1G53040' => 'ath', 'AT2G02910' => 'ath', 'AT4G09630' => 'ath', 'AT4G38500' => 'ath', 'AT5G42660' => 'ath', 'AT5G46220' => 'ath', 'ATR0152G026' => 'atr', 'ATR0564G343' => 'atr', 'ATR0706G151' => 'atr', 'ATR0733G207' => 'atr', 'ATR0751G234' => 'atr', 'ATR0807G048' => 'atr', 'ATR1091G084' => 'atr', 'Atru.chr10.1229' => 'acertr', 'Atru.chr10.1230' => 'acertr', 'Atru.chr10.1874' => 'acertr', 'Atru.chr11.1808' => 'acertr', 'Atru.chr13.1795' => 'acertr', 'Atru.chr13.570' => 'acertr', 'Atru.chr2.2608' => 'acertr', 'Atru.chr2.2609' => 'acertr', 'Atru.chr5.3428' => 'acertr', 'Atru.chr8.1171' => 'acertr', 'AUR62004651' => 'cqu', 'AUR62008675' => 'cqu', 'AUR62010014' => 'cqu', 'AUR62013004' => 'cqu', 'AUR62014825' => 'cqu', 'AUR62015015' => 'cqu', 'AUR62015151' => 'cqu', 'AUR62017020' => 'cqu', 'AUR62019422' => 'cqu', 'AUR62023570' => 'cqu', 'AUR62025571' => 'cqu', 'AUR62029098' => 'cqu', 'AUR62033863' => 'cqu', 'AUR62034296' => 'cqu', 'AUR62040075' => 'cqu', 'BcaB02g07334' => 'bca', 'BcaB02g10575' => 'bca', 'BcaB03g12119' => 'bca', 'BcaB03g12120' => 'bca', 'BcaB03g13945' => 'bca', 'BcaB04g17123' => 'bca', 'BcaB04g17867' => 'bca', 'BcaB04g19839' => 'bca', 'BcaB07g30317' => 'bca', 'BcaB07g32432' => 'bca', 'BcaB07g33362' => 'bca', 'BcaB08g36611' => 'bca', 'BcaC01g00028' => 'bca', 'BcaC01g01356' => 'bca', 'BcaC01g02034' => 'bca', 'BcaC01g06051' => 'bca', 'BcaC03g16839' => 'bca', 'BcaC03g17176' => 'bca', 'BcaC05g26829' => 'bca', 'BcaC06g31490' => 'bca', 'BcaC06g35344' => 'bca', 'BcaC06g36570' => 'bca', 'BcaC07g37537' => 'bca', 'BcaC08g43491' => 'bca', 'BcaC08g43773' => 'bca', 'BcaNung00234' => 'bca', 'BcaNung01982' => 'bca', 'BcaNung03707' => 'bca', 'BcaNung06454' => 'bca', 'BolC2t10762H' => 'bol', 'BolC2t11191H' => 'bol', 'BolC3t14322H' => 'bol', 'BolC3t19747H' => 'bol', 'BolC3t21425H' => 'bol', 'BolC4t27800H' => 'bol', 'BolC5t31423H' => 'bol', 'BolC6t35951H' => 'bol', 'BolC6t36282H' => 'bol', 'BolC7t40678H' => 'bol', 'BolC7t40679H' => 'bol', 'BolC7t42222H' => 'bol', 'BolC7t43492H' => 'bol', 'BolC7t46785H' => 'bol', 'BolC8t47853H' => 'bol', 'BolC9t56805H' => 'bol', 'BraA02t08000Z' => 'bra', 'BraA02t08341Z' => 'bra', 'BraA03t10936Z' => 'bra', 'BraA03t15657Z' => 'bra', 'BraA04t18100Z' => 'bra', 'BraA05t20523Z' => 'bra', 'BraA06t23353Z' => 'bra', 'BraA06t27473Z' => 'bra', 'BraA06t27769Z' => 'bra', 'BraA07t28928Z' => 'bra', 'BraA08t32236Z' => 'bra', 'BraA08t32841Z' => 'bra', 'BraA08t34524Z' => 'bra', 'BraA09t38742Z' => 'bra', 'BraA09t39295Z' => 'bra', 'C02p47180' => 'bna', 'C02p50990' => 'bna', 'C03p19360' => 'bna', 'C03p74950' => 'bna', 'C03p91000' => 'bna', 'C04p63260' => 'bna', 'C05p27050' => 'bna', 'C06p08750' => 'bna', 'C06p11490' => 'bna', 'C07p02820' => 'bna', 'C07p17180' => 'bna', 'C07p29440' => 'bna', 'C07p63730' => 'bna', 'C09p39260' => 'bna', 'CAN.G1164.34' => 'can', 'CAN.G1164.39' => 'can', 'CAN.G1530.3' => 'can', 'CAN.G162.61' => 'can', 'CAN.G176.6' => 'can', 'CAN.G289.49' => 'can', 'CAN.G370.21' => 'can', 'CAN.G370.22' => 'can', 'CAN.G371.117' => 'can', 'CAN.G58.37' => 'can', 'CAN.G588.98' => 'can', 'CANSAT21G2266' => 'cansat', 'CANSAT25G2799' => 'cansat', 'CANSAT35G0862' => 'cansat', 'CANSAT35G1704' => 'cansat', 'CANSAT35G1760' => 'cansat', 'CANSAT56G3971' => 'cansat', 'CANSAT56G4116' => 'cansat', 'CANSAT80G1259' => 'cansat', 'CARHR027730' => 'chi', 'CARHR033880' => 'chi', 'CARHR043270' => 'chi', 'CARHR145330' => 'chi', 'CARHR145340' => 'chi', 'CARHR175570' => 'chi', 'CARHR181570' => 'chi', 'CARHR258470' => 'chi', 'CARHR260490' => 'chi', 'CARHR294220' => 'chi', 'Carub.0001s2668' => 'cru', 'Carub.0001s3257' => 'cru', 'Carub.0001s4220' => 'cru', 'Carub.0005s0179' => 'cru', 'Carub.0006s2807' => 'cru', 'Carub.0007s0039' => 'cru', 'Carub.0008s0169' => 'cru', 'Carub.0008s0636' => 'cru', 'Ca_00338_v3' => 'car', 'Ca_00542_v3' => 'car', 'Ca_01844_v3' => 'car', 'Ca_10611_v3' => 'car', 'Ca_13326_v3' => 'car', 'Ca_17944_v3' => 'car', 'Ca_18546_v3' => 'car', 'Ca_24219_v3' => 'car', 'Ca_29972_v3' => 'car', 'CBR_g3681' => 'cbr', 'CBR_g40021' => 'cbr', 'Cc01_g08140' => 'ccan', 'Cc02_g13410' => 'ccan', 'Cc02_g37480' => 'ccan', 'Cc05_g12030' => 'ccan', 'Cc09_g03370' => 'ccan', 'Cc09_g10300' => 'ccan', 'Cc10_g03530' => 'ccan', 'Cc10_g11380' => 'ccan', 'CDE01G0176' => 'cde', 'CDE02G0675' => 'cde', 'CDE02G0942' => 'cde', 'CDE02G1153' => 'cde', 'CDE02G4177' => 'cde', 'CDE04G2117' => 'cde', 'CDE04G2736' => 'cde', 'CDE08G1161' => 'cde', 'CDE09G1238' => 'cde', 'Cfa000467' => 'cfa', 'Cfa000947' => 'cfa', 'Cfa004969' => 'cfa', 'Cfa005284' => 'cfa', 'Cfa008993' => 'cfa', 'Cfa018187' => 'cfa', 'Cfa018454' => 'cfa', 'Cfa020585' => 'cfa', 'Ciclev10000424m.g' => 'ccl', 'Ciclev10003605m.g' => 'ccl', 'Ciclev10007828m.g' => 'ccl', 'Ciclev10014620m.g' => 'ccl', 'Ciclev10015169m.g' => 'ccl', 'Ciclev10018291m.g' => 'ccl', 'Ciclev10028256m.g' => 'ccl', 'Ciclev10033822m.g' => 'ccl', 'CiPaw.05G060300' => 'cil', 'CiPaw.05G085000' => 'cil', 'CiPaw.06G083700' => 'cil', 'CiPaw.06G120300' => 'cil', 'CiPaw.09G060500' => 'cil', 'CiPaw.09G123800' => 'cil', 'CiPaw.11G169700' => 'cil', 'CiPaw.12G118300' => 'cil', 'CiPaw.15G071000' => 'cil', 'CiPaw.15G081900' => 'cil', 'ClCG01G024610' => 'cla', 'ClCG03G006070' => 'cla', 'ClCG05G019250' => 'cla', 'ClCG09G009500' => 'cla', 'ClCG11G008200' => 'cla', 'ClCG11G018080' => 'cla', 'COL.COLO4_17373' => 'col', 'COL.COLO4_22994' => 'col', 'COL.COLO4_26389' => 'col', 'COL.COLO4_27170' => 'col', 'COL.COLO4_31074' => 'col', 'COL.COLO4_31465' => 'col', 'COL.COLO4_36438' => 'col', 'COL.COLO4_36439' => 'col', 'Cpa.g.c38781' => 'cpa', 'Cpa.g.sc128.12' => 'cpa', 'Cpa.g.sc166.7' => 'cpa', 'Cpa.g.sc166.8' => 'cpa', 'Cpa.g.sc20.111' => 'cpa', 'Cpa.g.sc27.31' => 'cpa', 'Cpa.g.sc64.36' => 'cpa', 'Cpa.g.sc64.37' => 'cpa', 'Cpa.g.sc66.49' => 'cpa', 'Cpa.g.sc80.64' => 'cpa', 'CsaV3_1G012320' => 'csa', 'CsaV3_2G008480' => 'csa', 'CsaV3_2G033450' => 'csa', 'CsaV3_3G044830' => 'csa', 'CsaV3_4G033710' => 'csa', 'CsaV3_6G051730' => 'csa', 'CsaV3_7G025350' => 'csa', 'CSS0001067' => 'camsi', 'CSS0005996' => 'camsi', 'CSS0006590' => 'camsi', 'CSS0009673' => 'camsi', 'CSS0010201' => 'camsi', 'CSS0010549' => 'camsi', 'CSS0011364' => 'camsi', 'CSS0014473' => 'camsi', 'CSS0014961' => 'camsi', 'CSS0020191' => 'camsi', 'CSS0021165' => 'camsi', 'CSS0022306' => 'camsi', 'CSS0030591' => 'camsi', 'CSS0030696' => 'camsi', 'CSS0032653' => 'camsi', 'CSS0037487' => 'camsi', 'CSS0041102' => 'camsi', 'CSS0041261' => 'camsi', 'CSS0046246' => 'camsi', 'CSS0049256' => 'camsi', 'DCAR_004075' => 'dca', 'DCAR_011538' => 'dca', 'DCAR_019553' => 'dca', 'DCAR_020952' => 'dca', 'DCAR_021739' => 'dca', 'DCAR_027407' => 'dca', 'DCAR_027913' => 'dca', 'DCAR_028066' => 'dca', 'Dinv05899' => 'din', 'Dinv07563' => 'din', 'Dinv08010' => 'din', 'Dinv14125' => 'din', 'Dinv20172' => 'din', 'Dinv30743' => 'din', 'Dinv31229' => 'din', 'Dinv34162' => 'din', 'Dinv36028' => 'din', 'Dinv39368' => 'din', 'Dinv40565' => 'din', 'Dinv41706' => 'din', 'Duzib052G0089' => 'dzi', 'Duzib116G0641' => 'dzi', 'Duzib132G0069' => 'dzi', 'Duzib132G1219' => 'dzi', 'Duzib147G0278' => 'dzi', 'Duzib160G0480' => 'dzi', 'Duzib170G0661' => 'dzi', 'Duzib177G0591' => 'dzi', 'Duzib187G1353' => 'dzi', 'Duzib192G0858' => 'dzi', 'Duzib192G0883' => 'dzi', 'Duzib213G0506' => 'dzi', 'Duzib235G0289' => 'dzi', 'Duzib251G0422' => 'dzi', 'ECA232G3898' => 'eca', 'ECA233G5950' => 'eca', 'ECA234G1699' => 'eca', 'ECA234G2421' => 'eca', 'ECA236G0426' => 'eca', 'ECA236G4331' => 'eca', 'ECA248G2573' => 'eca', 'EL10Ac1g00077' => 'bvu', 'EL10Ac1g01746' => 'bvu', 'EL10Ac2g03464' => 'bvu', 'EL10Ac4g08176' => 'bvu', 'EL10Ac7g17521' => 'bvu', 'EL10Ac8g20386' => 'bvu', 'EL10Ac9g21343' => 'bvu', 'EL10Ac9g22688' => 'bvu', 'Eucgr.B03434' => 'egr', 'Eucgr.D00618' => 'egr', 'Eucgr.E02395' => 'egr', 'Eucgr.F01129' => 'egr', 'Eucgr.F02622' => 'egr', 'Eucgr.F04207' => 'egr', 'FAN01G0570' => 'fan', 'FAN03G3351' => 'fan', 'FAN06G3702' => 'fan', 'FAN07G2149' => 'fan', 'FAN10G3758' => 'fan', 'FAN11G1170' => 'fan', 'FAN11G2050' => 'fan', 'FAN11G2724' => 'fan', 'FAN12G1700' => 'fan', 'FAN12G2028' => 'fan', 'FAN15G1160' => 'fan', 'FAN15G3063' => 'fan', 'FAN16G2540' => 'fan', 'FAN16G3077' => 'fan', 'FAN16G3624' => 'fan', 'FAN17G0221' => 'fan', 'FAN20G2492' => 'fan', 'FAN20G2905' => 'fan', 'FAN21G0548' => 'fan', 'FAN21G1300' => 'fan', 'FAN22G0077' => 'fan', 'FAN22G1315' => 'fan', 'FAN24G1280' => 'fan', 'FAN24G1445' => 'fan', 'FAN24G3527' => 'fan', 'FAN25G0464' => 'fan', 'FAN25G2885' => 'fan', 'FAN25G3270' => 'fan', 'FAN27G1101' => 'fan', 'FAN27G2846' => 'fan', 'FAN27G3524' => 'fan', 'FvH4_2g11770' => 'fve', 'FvH4_2g15630' => 'fve', 'FvH4_3g05570' => 'fve', 'FvH4_3g09110' => 'fve', 'FvH4_3g19940' => 'fve', 'FvH4_4g04821' => 'fve', 'FvH4_4g31480' => 'fve', 'FvH4_7g01740' => 'fve', 'Glyma.05G130400' => 'gma', 'Glyma.05G156400' => 'gma', 'Glyma.07G197000' => 'gma', 'Glyma.08G085151' => 'gma', 'Glyma.08G114500' => 'gma', 'Glyma.08G300400' => 'gma', 'Glyma.10G215800' => 'gma', 'Glyma.12G224400' => 'gma', 'Glyma.13G179300' => 'gma', 'Glyma.13G218151' => 'gma', 'Glyma.13G238800' => 'gma', 'Glyma.13G276900' => 'gma', 'Glyma.14G078200' => 'gma', 'Glyma.15G074500' => 'gma', 'Glyma.15G094100' => 'gma', 'Glyma.17G247200' => 'gma', 'Glyma.18G120100' => 'gma', 'Glyma.20G176000' => 'gma', 'Gohir.A01G063600' => 'ghi', 'Gohir.A01G170301' => 'ghi', 'Gohir.A02G060500' => 'ghi', 'Gohir.A05G133850' => 'ghi', 'Gohir.A05G161400' => 'ghi', 'Gohir.A06G012900' => 'ghi', 'Gohir.A06G035901' => 'ghi', 'Gohir.A06G127100' => 'ghi', 'Gohir.A06G210500' => 'ghi', 'Gohir.A08G008650' => 'ghi', 'Gohir.A09G072700' => 'ghi', 'Gohir.A09G088301' => 'ghi', 'Gohir.A10G040600' => 'ghi', 'Gohir.A12G036300' => 'ghi', 'Gohir.A12G143350' => 'ghi', 'Gohir.A12G165500' => 'ghi', 'Gohir.A13G145700' => 'ghi', 'Gohir.D01G050000' => 'ghi', 'Gohir.D01G051366' => 'ghi', 'Gohir.D01G161350' => 'ghi', 'Gohir.D02G065900' => 'ghi', 'Gohir.D05G164200' => 'ghi', 'Gohir.D05G355500' => 'ghi', 'Gohir.D06G010400' => 'ghi', 'Gohir.D06G111250' => 'ghi', 'Gohir.D06G132000' => 'ghi', 'Gohir.D06G210500' => 'ghi', 'Gohir.D07G165675' => 'ghi', 'Gohir.D08G062240' => 'ghi', 'Gohir.D08G086101' => 'ghi', 'Gohir.D08G138060' => 'ghi', 'Gohir.D09G072300' => 'ghi', 'Gohir.D10G041400' => 'ghi', 'Gohir.D11G191020' => 'ghi', 'Gohir.D11G212066' => 'ghi', 'Gohir.D12G036300' => 'ghi', 'Gohir.D12G168600' => 'ghi', 'Gohir.D13G150600' => 'ghi', 'Gorai.001G057300' => 'gra', 'Gorai.002G069900' => 'gra', 'Gorai.002G200000' => 'gra', 'Gorai.003G067600' => 'gra', 'Gorai.005G074800' => 'gra', 'Gorai.006G087300' => 'gra', 'Gorai.008G037500' => 'gra', 'Gorai.008G181400' => 'gra', 'Gorai.009G169400' => 'gra', 'Gorai.009G387900' => 'gra', 'Gorai.010G013300' => 'gra', 'Gorai.010G153800' => 'gra', 'Gorai.010G255800' => 'gra', 'Gorai.011G043700' => 'gra', 'Gorai.011G198900' => 'gra', 'Gorai.013G168400' => 'gra', 'GSVIVG01005212001' => 'vvi', 'GSVIVG01006163001' => 'vvi', 'GSVIVG01009625001' => 'vvi', 'GSVIVG01014338001' => 'vvi', 'GSVIVG01020005001' => 'vvi', 'GSVIVG01021450001' => 'vvi', 'GSVIVG01023975001' => 'vvi', 'GSVIVG01034490001' => 'vvi', 'HanXRQChr04g0112071' => 'han', 'HanXRQChr05g0131151' => 'han', 'HanXRQChr09g0262371' => 'han', 'HanXRQChr09g0268401' => 'han', 'HanXRQChr10g0279241' => 'han', 'HanXRQChr10g0297961' => 'han', 'HanXRQChr11g0326231' => 'han', 'HanXRQChr11g0328471' => 'han', 'HanXRQChr16g0507941' => 'han', 'HanXRQChr17g0560211' => 'han', 'Haze_02108' => 'cav', 'Haze_02428' => 'cav', 'Haze_05593' => 'cav', 'Haze_06448' => 'cav', 'Haze_09427' => 'cav', 'Haze_12022' => 'cav', 'Haze_17612' => 'cav', 'Haze_17928' => 'cav', 'Hma1.2p1_0032F.1_g019250' => 'hma', 'Hma1.2p1_0163F.1_g072690' => 'hma', 'Hma1.2p1_0265F.1_g106710' => 'hma', 'Hma1.2p1_0286F.1_g113970' => 'hma', 'Hma1.2p1_0363F.1_g136640' => 'hma', 'Hma1.2p1_0584F.1_g183470' => 'hma', 'Hma1.2p1_0885F.1_g232570' => 'hma', 'HPP92_006022' => 'vpl', 'HPP92_007320' => 'vpl', 'HPP92_011521' => 'vpl', 'HPP92_019387' => 'vpl', 'HPP92_024038' => 'vpl', 'Hund05891' => 'sun', 'Hund06450' => 'sun', 'Hund12053' => 'sun', 'Hund16800' => 'sun', 'Hund21222' => 'sun', 'Hund22896' => 'sun', 'Hund23746' => 'sun', 'Hund27083' => 'sun', 'Lalb_Chr02g0141831' => 'lal', 'Lalb_Chr02g0141841' => 'lal', 'Lalb_Chr05g0220411' => 'lal', 'Lalb_Chr06g0162081' => 'lal', 'Lalb_Chr09g0327651' => 'lal', 'Lalb_Chr13g0295051' => 'lal', 'Lalb_Chr15g0086801' => 'lal', 'Lalb_Chr16g0383781' => 'lal', 'Lalb_Chr16g0383791' => 'lal', 'Lalb_Chr18g0055441' => 'lal', 'Lalb_Chr18g0059611' => 'lal', 'Lalb_Chr20g0109661' => 'lal', 'Lalb_Chr20g0109831' => 'lal', 'Lalb_Chr20g0121871' => 'lal', 'Lalb_Chr22g0355361' => 'lal', 'Lalb_Chr25g0286371' => 'lal', 'Lj1A1187G43' => 'lonja', 'Lj1A1205T50' => 'lonja', 'Lj1A800G33' => 'lonja', 'Lj1C1187T7' => 'lonja', 'Lj1C843T11' => 'lonja', 'Lj1g0010940' => 'lja', 'Lj2A288T69' => 'lonja', 'Lj3g0024276' => 'lja', 'Lj4A47T76' => 'lonja', 'Lj4g0005805' => 'lja', 'Lj4g0006097' => 'lja', 'Lj4g0008528' => 'lja', 'Lj4g0024907' => 'lja', 'Lj5g0012472' => 'lja', 'Lj5g0018648' => 'lja', 'Lj6C789G1' => 'lonja', 'Lj6g0004000' => 'lja', 'Lj7A292G67' => 'lonja', 'Lj7A292T64' => 'lonja', 'Lj9A400T58' => 'lonja', 'Lsat_1_v5_gn_1_126181' => 'lsa', 'Lsat_1_v5_gn_4_123041' => 'lsa', 'Lsat_1_v5_gn_4_133620' => 'lsa', 'Lsat_1_v5_gn_4_53221' => 'lsa', 'Lsat_1_v5_gn_4_71961' => 'lsa', 'Lsat_1_v5_gn_7_105241' => 'lsa', 'Lsat_1_v5_gn_7_21361' => 'lsa', 'Lsat_1_v5_gn_7_28860' => 'lsa', 'Lsat_1_v5_gn_7_31260' => 'lsa', 'Lsat_1_v5_gn_8_52801' => 'lsa', 'Manes.02G191400' => 'mes', 'Manes.03G110100' => 'mes', 'Manes.04G071100' => 'mes', 'Manes.05G100500' => 'mes', 'Manes.05G164700' => 'mes', 'Manes.15G087000' => 'mes', 'Manes.15G121500' => 'mes', 'Manes.16G028300' => 'mes', 'Manes.17G046100' => 'mes', 'Manes.17G069800' => 'mes', 'Manes.18G100500' => 'mes', 'Mapoly0002s0109' => 'mpo', 'Mapoly0024s0007' => 'mpo', 'Mapoly0089s0032' => 'mpo', 'MBI04_g42241_MAGBIO' => 'mbi', 'MBI05_g11988_MAGBIO' => 'mbi', 'MBI05_g35452_MAGBIO' => 'mbi', 'MBI07_g30179_MAGBIO' => 'mbi', 'MBI07_g35859_MAGBIO' => 'mbi', 'MBI07_g35860_MAGBIO' => 'mbi', 'MBI07_g37166_MAGBIO' => 'mbi', 'MBI08_g18172_MAGBIO' => 'mbi', 'MBI09_g08441_MAGBIO' => 'mbi', 'MBI13_g01676_MAGBIO' => 'mbi', 'MBI14_g42955_MAGBIO' => 'mbi', 'MBI16_g13161_MAGBIO' => 'mbi', 'MBI17_g27204_MAGBIO' => 'mbi', 'MBI19_g21595_MAGBIO' => 'mbi', 'MD00G1148400' => 'mdo', 'MD02G1301200' => 'mdo', 'MD03G1227800' => 'mdo', 'MD05G1041100' => 'mdo', 'MD05G1124800' => 'mdo', 'MD05G1284000' => 'mdo', 'MD05G1338800' => 'mdo', 'MD05G1338900' => 'mdo', 'MD07G1022800' => 'mdo', 'MD10G1047500' => 'mdo', 'MD10G1127500' => 'mdo', 'MD10G1262300' => 'mdo', 'MD10G1293800' => 'mdo', 'MD16G1074300' => 'mdo', 'Medtr1g021670' => 'mtr', 'Medtr1g096320' => 'mtr', 'Medtr2g013690' => 'mtr', 'Medtr2g019450' => 'mtr', 'Medtr2g085170' => 'mtr', 'Medtr4g088785' => 'mtr', 'Medtr8g055930' => 'mtr', 'Medtr8g085850' => 'mtr', 'MELO3C002605.2' => 'cme', 'MELO3C003891.2' => 'cme', 'MELO3C004012.2' => 'cme', 'MELO3C007134.2' => 'cme', 'MELO3C008118.2' => 'cme', 'MELO3C016700.2' => 'cme', 'MELO3C024127.2' => 'cme', 'MELO3C033361.2' => 'cme', 'MELO3C033362.2' => 'cme', 'Migut.C00430' => 'egut', 'Migut.C01246' => 'egut', 'Migut.E00101' => 'egut', 'Migut.H01486' => 'egut', 'Migut.H01939' => 'egut', 'Migut.K00360' => 'egut', 'Migut.M00910' => 'egut', 'Migut.M01139' => 'egut', 'Migut.N02677' => 'egut', 'MSTRG.13252' => 'ama', 'MSTRG.14701' => 'ama', 'MSTRG.1521' => 'ama', 'MSTRG.15884' => 'ama', 'MSTRG.16242' => 'ama', 'MSTRG.22285' => 'ama', 'MSTRG.22444' => 'ama', 'MSTRG.2349' => 'ama', 'MSTRG.26308' => 'ama', 'MSTRG.28296' => 'ama', 'MSTRG.9895' => 'ama', 'Nitab4.5_0000110g0060' => 'nta', 'Nitab4.5_0000420g0130' => 'nta', 'Nitab4.5_0000422g0030' => 'nta', 'Nitab4.5_0000560g0180' => 'nta', 'Nitab4.5_0000703g0100' => 'nta', 'Nitab4.5_0000786g0200' => 'nta', 'Nitab4.5_0001336g0020' => 'nta', 'Nitab4.5_0001796g0030' => 'nta', 'Nitab4.5_0003348g0060' => 'nta', 'Nitab4.5_0003698g0040' => 'nta', 'Nitab4.5_0003942g0090' => 'nta', 'Nitab4.5_0004775g0070' => 'nta', 'Nitab4.5_0004864g0030' => 'nta', 'Nitab4.5_0005615g0020' => 'nta', 'Nitab4.5_0009288g0030' => 'nta', 'Nitab4.5_0009341g0010' => 'nta', 'Nitab4.5_0009535g0010' => 'nta', 'Nn1g03995' => 'nnu', 'Nn1g04100' => 'nnu', 'Nn1g06530' => 'nnu', 'Nn3g16404' => 'nnu', 'Nn3g17212' => 'nnu', 'Nn3g20776' => 'nnu', 'Nn3g21923' => 'nnu', 'Nn5g27737' => 'nnu', 'Nn5g29461' => 'nnu', 'Nn7g38355' => 'nnu', 'Nn8g39873' => 'nnu', 'Oeu000548.2' => 'oeu', 'Oeu004672.1' => 'oeu', 'Oeu015605.2' => 'oeu', 'Oeu016092.1' => 'oeu', 'Oeu017879.3' => 'oeu', 'Oeu024910.1' => 'oeu', 'Oeu028965.1' => 'oeu', 'Oeu031269.1' => 'oeu', 'Oeu031270.1' => 'oeu', 'Oeu032535.1' => 'oeu', 'Oeu034151.1' => 'oeu', 'Oeu034152.1' => 'oeu', 'Oeu034588.2' => 'oeu', 'Oeu050846.1' => 'oeu', 'Oeu050849.2' => 'oeu', 'Oeu051063.2' => 'oeu', 'Oeu052368.1' => 'oeu', 'Oeu052370.1' => 'oeu', 'Os01g0210400' => 'osa', 'Os01g0304300' => 'osa', 'Os01g0749100' => 'osa', 'Os02g0745800' => 'osa', 'Os03g0769050' => 'osa', 'Os05g0531500' => 'osa', 'Os06g0724300' => 'osa', 'Os11g0198100' => 'osa', 'Peaxi162Scf00069g01425' => 'pax', 'Peaxi162Scf00280g00811' => 'pax', 'Peaxi162Scf00310g00615' => 'pax', 'Peaxi162Scf00362g00542' => 'pax', 'Peaxi162Scf00461g00310' => 'pax', 'Peaxi162Scf00530g00118' => 'pax', 'Peaxi162Scf00541g00057' => 'pax', 'Peaxi162Scf00661g00017' => 'pax', 'Peaxi162Scf00926g00027' => 'pax', 'Peaxi162Scf01064g00263' => 'pax', 'Peaxi162Scf01211g00135' => 'pax', 'PGR004G2336' => 'pgr', 'PGR042G0327' => 'pgr', 'PGR042G1957' => 'pgr', 'PGR042G2003' => 'pgr', 'PGR042G3929' => 'pgr', 'PGR083G1137' => 'pgr', 'PGR083G1364' => 'pgr', 'PGSC0003DMG400003381' => 'stu', 'PGSC0003DMG400003417' => 'stu', 'PGSC0003DMG400008981' => 'stu', 'PGSC0003DMG400012417' => 'stu', 'PGSC0003DMG400012823' => 'stu', 'PGSC0003DMG400016885' => 'stu', 'PGSC0003DMG400022812' => 'stu', 'PGSC0003DMG400029726' => 'stu', 'PGSC0003DMG401009243' => 'stu', 'PGSC0003DMG401031505' => 'stu', 'PGSC0003DMG402031505' => 'stu', 'Phvul.001G017600' => 'pvu', 'Phvul.002G193500' => 'pvu', 'Phvul.002G228900' => 'pvu', 'Phvul.002G236800' => 'pvu', 'Phvul.003G049500' => 'pvu', 'Phvul.005G072000' => 'pvu', 'Phvul.006G164800' => 'pvu', 'Phvul.006G185100' => 'pvu', 'Phvul.007G090000' => 'pvu', 'Potri.001G399800' => 'ptr', 'Potri.002G149900' => 'ptr', 'Potri.004G044100' => 'ptr', 'Potri.004G177600' => 'ptr', 'Potri.009G138000' => 'ptr', 'Potri.010G094000' => 'ptr', 'Potri.011G053000' => 'ptr', 'Potri.011G119300' => 'ptr', 'Potri.013G113700' => 'ptr', 'Potri.018G107800' => 'ptr', 'Potri.019G084100' => 'ptr', 'Pp3c14_23720' => 'ppa', 'Pp3c16_6340' => 'ppa', 'Pp3c23_13420' => 'ppa', 'Pp3c24_2740' => 'ppa', 'Pp3c25_860' => 'ppa', 'Pp3c8_21750' => 'ppa', 'Prupe.1G273000' => 'ppe', 'Prupe.1G273700' => 'ppe', 'Prupe.1G274100' => 'ppe', 'Prupe.2G023300' => 'ppe', 'Prupe.4G048000' => 'ppe', 'Prupe.4G080400' => 'ppe', 'Prupe.4G181200' => 'ppe', 'Prupe.8G056900' => 'ppe', 'Prupe.8G168700' => 'ppe', 'Psat1g189080' => 'psa', 'Psat1g204760' => 'psa', 'Psat4g175560' => 'psa', 'Psat4g177720' => 'psa', 'Psat5g244240' => 'psa', 'Psat6g010720' => 'psa', 'Psat6g187200' => 'psa', 'Psat7g072040' => 'psa', 'PSO017G3501' => 'pso', 'PSO063G2148' => 'pso', 'PSO063G5608' => 'pso', 'PSO210G6392' => 'pso', 'PSO541G2319' => 'pso', 'PSO541G2836' => 'pso', 'PSO541G4012' => 'pso', 'PSO541G6253' => 'pso', 'PSO675G0580' => 'pso', 'PSO675G0856' => 'pso', 'PSO675G5635' => 'pso', 'PSO675G9157' => 'pso', 'PSO832G1660' => 'pso', 'PSO832G1969' => 'pso', 'QL02p007186' => 'qlo', 'QL02p033904' => 'qlo', 'QL03p064391' => 'qlo', 'QL05p040593' => 'qlo', 'QL05p058242' => 'qlo', 'QL08p021825' => 'qlo', 'QL11p004981' => 'qlo', 'RcHm_v2.0_Chr1g0318301' => 'rch', 'RcHm_v2.0_Chr4g0418501' => 'rch', 'RcHm_v2.0_Chr4g0439971' => 'rch', 'RcHm_v2.0_Chr5g0008541' => 'rch', 'RcHm_v2.0_Chr5g0014101' => 'rch', 'RcHm_v2.0_Chr5g0014131' => 'rch', 'RcHm_v2.0_Chr5g0033621' => 'rch', 'RcHm_v2.0_Chr6g0272041' => 'rch', 'RcHm_v2.0_Chr6g0278831' => 'rch', 'Rhsim02G0130400' => 'rsi', 'Rhsim02G0171100' => 'rsi', 'Rhsim05G0053000' => 'rsi', 'Rhsim05G0053100' => 'rsi', 'Rhsim06G0096500' => 'rsi', 'Rhsim06G0096600' => 'rsi', 'Rhsim06G0199100' => 'rsi', 'Rhsim12G0062300' => 'rsi', 'Rhsim12G0062800' => 'rsi', 'Sabra02G0118600' => 'sbr', 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'Solyc03g079860.2' => 'sly', 'Solyc04g079770.3' => 'sly', 'Solyc05g007430.4' => 'sly', 'Solyc07g063150.3' => 'sly', 'Solyc08g016620.3' => 'sly', 'Solyc09g057590.3' => 'sly', 'Solyc09g057600.1' => 'sly', 'Solyc10g009050.3' => 'sly', 'Solyc11g017420.2' => 'sly', 'Sopen01g053810' => 'spe', 'Sopen02g023040' => 'spe', 'Sopen03g002440' => 'spe', 'Sopen04g033350' => 'spe', 'Sopen05g003310' => 'spe', 'Sopen07g004050' => 'spe', 'Sopen07g031340' => 'spe', 'Sopen08g006990' => 'spe', 'Sopen10g004830' => 'spe', 'Sopen11g009370' => 'spe', 'Sp1g24450' => 'spa', 'Sp1g29670' => 'spa', 'Sp1g39600' => 'spa', 'Sp2g11080' => 'spa', 'Sp2g13970' => 'spa', 'Sp4g16130' => 'spa', 'Sp6g13080' => 'spa', 'Sp7g37270' => 'spa', 'TAR371G0065' => 'tar', 'TAR376G0340' => 'tar', 'TAR376G0435' => 'tar', 'TAR381G0002' => 'tar', 'TAR381G1236' => 'tar', 'TAR624G0055' => 'tar', 'TAR624G0324' => 'tar', 'TAR624G0696' => 'tar', 'TAR624G0906' => 'tar', 'TAR625G0107' => 'tar', 'TAR626G0015' => 'tar', 'TAR626G1356' => 'tar', 'TAR627G0888' => 'tar', 'TAR628G0399' => 'tar', 'TAR628G1327' => 'tar', 'TAR629G2831' => 'tar', 'TAR629G2874' => 'tar', 'TAR633G1432' => 'tar', 'TAR633G2771' => 'tar', 'THA.LOC104803394' => 'tha', 'THA.LOC104805153' => 'tha', 'THA.LOC104806784' => 'tha', 'THA.LOC104810473' => 'tha', 'THA.LOC104813100' => 'tha', 'THA.LOC104814215' => 'tha', 'THA.LOC104815554' => 'tha', 'THA.LOC104820544' => 'tha', 'THA.LOC104824754' => 'tha', 'THA.LOC104827717' => 'tha', 'Thecc.02G031400' => 'tca', 'Thecc.02G055900' => 'tca', 'Thecc.02G350800' => 'tca', 'Thecc.06G150900' => 'tca', 'Thecc.06G186600' => 'tca', 'Thecc.07G089600' => 'tca', 'Thecc.08G020400' => 'tca', 'Thecc.08G182100' => 'tca', 'Thhalv10000873m.g' => 'esa', 'Thhalv10004185m.g' => 'esa', 'Thhalv10006981m.g' => 'esa', 'Thhalv10007204m.g' => 'esa', 'Thhalv10011374m.g' => 'esa', 'Thhalv10013482m.g' => 'esa', 'Thhalv10017801m.g' => 'esa', 'Thhalv10024983m.g' => 'esa', 'TPR.G12072' => 'tpr', 'TPR.G15769' => 'tpr', 'TPR.G16504' => 'tpr', 'TPR.G16506' => 'tpr', 'TPR.G24345' => 'tpr', 'TPR.G26666' => 'tpr', 'TPR.G27320' => 'tpr', 'TPR.G31819' => 'tpr', 'TPR.G38879' => 'tpr', 'TPR.G39015' => 'tpr', 'TPR.G8819' => 'tpr', 'TWI09G0924' => 'twi', 'TWI12G0811' => 'twi', 'TWI12G1294' => 'twi', 'TWI31G0150' => 'twi', 'TWI36G1262' => 'twi', 'TWI38G1287' => 'twi', 'TWI38G1633' => 'twi', 'TWI38G1982' => 'twi', 'TWI39G0116' => 'twi', 'TWI60G1011' => 'twi', 'TWI63G0171' => 'twi', 'TWI73G0839' => 'twi', 'TWI79G1511' => 'twi', 'unitig_0.g915' => 'ugi', 'unitig_0.g916' => 'ugi', 'unitig_21.g20219' => 'ugi', 'unitig_21.g20416' => 'ugi', 'unitig_578.g16132' => 'ugi', 'unitig_578.g16718' => 'ugi', 'unitig_62.g23481' => 'ugi', 'unitig_744.g24535' => 'ugi', 'unitig_749.g13525' => 'ugi', 'vmacro01248' => 'vma', 'vmacro02290' => 'vma', 'vmacro10946' => 'vma', 'vmacro11865' => 'vma', 'vmacro12493' => 'vma', 'vmacro17322' => 'vma', 'vmacro21599' => 'vma', 'vmacro23041' => 'vma', 'VMungo0251G0004' => 'vmu', 'VMungo0251G2639' => 'vmu', 'VMungo0251G2967' => 'vmu', 'VMungo0540G0864' => 'vmu', 'VMungo0540G1569' => 'vmu', 'VMungo0647G0317' => 'vmu', 'VMungo0720G1373' => 'vmu', 'VMungo0720G1508' => 'vmu', 'VMungo1080G0485' => 'vmu', 'VMungo1215G3177' => 'vmu', 'Zm00001eb112600' => 'zma', 'Zm00001eb120220' => 'zma', 'Zm00001eb153240' => 'zma', 'Zm00001eb168880' => 'zma', 'Zm00001eb213920' => 'zma', 'Zm00001eb228280' => 'zma', 'Zm00001eb254580' => 'zma', 'Zm00001eb272180' => 'zma', 'Zm00001eb293190' => 'zma', 'Zm00001eb322930' => 'zma', 'Zm00001eb353360' => 'zma', 'Zm00001eb353390' => 'zma', 'Zm00001eb353430' => 'zma', 'Zm00001eb353440' => 'zma', 'Zm00001eb353780' => 'zma' ), 'gf_id' => 'HOM05D000499', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000499' ), 'data_identifier' => 'HOM05D000499', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000499', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1066', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p29780' => 'bna', 'A02p33180' => 'bna', 'A03p16470' => 'bna', 'A03p66010' => 'bna', 'A04p25970' => 'bna', 'A06p01270' => 'bna', 'A06p46080' => 'bna', 'A07p11400' => 'bna', 'A08p01840' => 'bna', 'A08p08230' => 'bna', 'A08p25740' => 'bna', 'A09p32070' => 'bna', 'A09p37830' => 'bna', 'A09p42840' => 'bna', 'A09p42850' => 'bna', 'Aa31LG10G2060' => 'aar', 'Aa31LG2G7410' => 'aar', 'Aa31LG6G10200' => 'aar', 'Aa31LG6G16680' => 'aar', 'Aa31LG6G8470' => 'aar', 'Aa31LG9G12730' => 'aar', 'Aa31LG9G13680' => 'aar', 'Aa31LG9G14920' => 'aar', 'Aa31LG9G6650' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4977' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5467' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3254' => 'aag', 'Actinidia02578' => 'ach', 'Actinidia07693' => 'ach', 'Actinidia08413' => 'ach', 'Actinidia08414' => 'ach', 'Actinidia15289' => 'ach', 'Actinidia19871' => 'ach', 'Actinidia21475' => 'ach', 'Actinidia22576' => 'ach', 'Actinidia28327' => 'ach', 'Actinidia32491' => 'ach', 'Actinidia39463' => 'ach', 'Actinidia39571' => 'ach', 'Ah.01g013750' => 'amhyb', 'Ah.01g023210' => 'amhyb', 'Ah.04g164850' => 'amhyb', 'Ah.05g178060' => 'amhyb', 'Ah.07g204270' => 'amhyb', 'Ah.07g208480' => 'amhyb', 'Ah.09g237410' => 'amhyb', 'Ah.14g089460' => 'amhyb', 'AL1G41790' => 'aly', 'AL1G49050' => 'aly', 'AL1G53810' => 'aly', 'AL1G61400' => 'aly', 'AL4G18580' => 'aly', 'AL5G12510' => 'aly', 'AL5G12540' => 'aly', 'AL6G43230' => 'aly', 'AL7G10370' => 'aly', 'AL7G19250' => 'aly', 'AL8G12240' => 'aly', 'AL8G18540' => 'aly', 'Aqoxy1G02409' => 'aox', 'Aqoxy2G03993' => 'aox', 'Aqoxy3G03357' => 'aox', 'Aqoxy4G00785' => 'aox', 'Aqoxy5G02598' => 'aox', 'Aqoxy6G00132' => 'aox', 'Aqoxy7G01776' => 'aox', 'Aqoxy7G02316' => 'aox', 'Aqoxy7G03973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.12AFKW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B8730' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27IQR1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3F75VG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3RE0GA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41TCQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.527VTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FIR39' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5W8UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DA38EV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ63HS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H1I32C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HC27T5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4M8AP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7N3CZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9UVDZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LS1NQA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT1D4B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SKC4TM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCFV76' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF9Q1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQWD9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1ZM88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WE07RT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YCK7VH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJE6Q6' => 'arhy', 'AT1G28240' => 'ath', 'AT1G34550' => 'ath', 'AT1G53040' => 'ath', 'AT2G02910' => 'ath', 'AT4G09630' => 'ath', 'AT4G38500' => 'ath', 'AT5G42660' => 'ath', 'AT5G46220' => 'ath', 'ATR0152G026' => 'atr', 'ATR0564G343' => 'atr', 'ATR0706G151' => 'atr', 'ATR0733G207' => 'atr', 'ATR0751G234' => 'atr', 'ATR0807G048' => 'atr', 'ATR1091G084' => 'atr', 'Atru.chr10.1229' => 'acertr', 'Atru.chr10.1230' => 'acertr', 'Atru.chr10.1874' => 'acertr', 'Atru.chr11.1808' => 'acertr', 'Atru.chr13.1795' => 'acertr', 'Atru.chr13.570' => 'acertr', 'Atru.chr2.2608' => 'acertr', 'Atru.chr2.2609' => 'acertr', 'Atru.chr5.3428' => 'acertr', 'Atru.chr8.1171' => 'acertr', 'AUR62004651' => 'cqu', 'AUR62008675' => 'cqu', 'AUR62010014' => 'cqu', 'AUR62013004' => 'cqu', 'AUR62014825' => 'cqu', 'AUR62015015' => 'cqu', 'AUR62015151' => 'cqu', 'AUR62017020' => 'cqu', 'AUR62019422' => 'cqu', 'AUR62023570' => 'cqu', 'AUR62025571' => 'cqu', 'AUR62029098' => 'cqu', 'AUR62033863' => 'cqu', 'AUR62034296' => 'cqu', 'AUR62040075' => 'cqu', 'BcaB02g07334' => 'bca', 'BcaB02g10575' => 'bca', 'BcaB03g12119' => 'bca', 'BcaB03g12120' => 'bca', 'BcaB03g13945' => 'bca', 'BcaB04g17123' => 'bca', 'BcaB04g17867' => 'bca', 'BcaB04g19839' => 'bca', 'BcaB07g30317' => 'bca', 'BcaB07g32432' => 'bca', 'BcaB07g33362' => 'bca', 'BcaB08g36611' => 'bca', 'BcaC01g00028' => 'bca', 'BcaC01g01356' => 'bca', 'BcaC01g02034' => 'bca', 'BcaC01g06051' => 'bca', 'BcaC03g16839' => 'bca', 'BcaC03g17176' => 'bca', 'BcaC05g26829' => 'bca', 'BcaC06g31490' => 'bca', 'BcaC06g35344' => 'bca', 'BcaC06g36570' => 'bca', 'BcaC07g37537' => 'bca', 'BcaC08g43491' => 'bca', 'BcaC08g43773' => 'bca', 'BcaNung00234' => 'bca', 'BcaNung01982' => 'bca', 'BcaNung03707' => 'bca', 'BcaNung06454' => 'bca', 'BolC2t10762H' => 'bol', 'BolC2t11191H' => 'bol', 'BolC3t14322H' => 'bol', 'BolC3t19747H' => 'bol', 'BolC3t21425H' => 'bol', 'BolC4t27800H' => 'bol', 'BolC5t31423H' => 'bol', 'BolC6t35951H' => 'bol', 'BolC6t36282H' => 'bol', 'BolC7t40678H' => 'bol', 'BolC7t40679H' => 'bol', 'BolC7t42222H' => 'bol', 'BolC7t43492H' => 'bol', 'BolC7t46785H' => 'bol', 'BolC8t47853H' => 'bol', 'BolC9t56805H' => 'bol', 'BraA02t08000Z' => 'bra', 'BraA02t08341Z' => 'bra', 'BraA03t10936Z' => 'bra', 'BraA03t15657Z' => 'bra', 'BraA04t18100Z' => 'bra', 'BraA05t20523Z' => 'bra', 'BraA06t23353Z' => 'bra', 'BraA06t27473Z' => 'bra', 'BraA06t27769Z' => 'bra', 'BraA07t28928Z' => 'bra', 'BraA08t32236Z' => 'bra', 'BraA08t32841Z' => 'bra', 'BraA08t34524Z' => 'bra', 'BraA09t38742Z' => 'bra', 'BraA09t39295Z' => 'bra', 'C02p47180' => 'bna', 'C02p50990' => 'bna', 'C03p19360' => 'bna', 'C03p74950' => 'bna', 'C03p91000' => 'bna', 'C04p63260' => 'bna', 'C05p27050' => 'bna', 'C06p08750' => 'bna', 'C06p11490' => 'bna', 'C07p02820' => 'bna', 'C07p17180' => 'bna', 'C07p29440' => 'bna', 'C07p63730' => 'bna', 'C09p39260' => 'bna', 'CAN.G1164.34' => 'can', 'CAN.G1164.39' => 'can', 'CAN.G1530.3' => 'can', 'CAN.G162.61' => 'can', 'CAN.G176.6' => 'can', 'CAN.G289.49' => 'can', 'CAN.G370.21' => 'can', 'CAN.G370.22' => 'can', 'CAN.G371.117' => 'can', 'CAN.G58.37' => 'can', 'CAN.G588.98' => 'can', 'CANSAT21G2266' => 'cansat', 'CANSAT25G2799' => 'cansat', 'CANSAT35G0862' => 'cansat', 'CANSAT35G1704' => 'cansat', 'CANSAT35G1760' => 'cansat', 'CANSAT56G3971' => 'cansat', 'CANSAT56G4116' => 'cansat', 'CANSAT80G1259' => 'cansat', 'CARHR027730' => 'chi', 'CARHR033880' => 'chi', 'CARHR043270' => 'chi', 'CARHR145330' => 'chi', 'CARHR145340' => 'chi', 'CARHR175570' => 'chi', 'CARHR181570' => 'chi', 'CARHR258470' => 'chi', 'CARHR260490' => 'chi', 'CARHR294220' => 'chi', 'Carub.0001s2668' => 'cru', 'Carub.0001s3257' => 'cru', 'Carub.0001s4220' => 'cru', 'Carub.0005s0179' => 'cru', 'Carub.0006s2807' => 'cru', 'Carub.0007s0039' => 'cru', 'Carub.0008s0169' => 'cru', 'Carub.0008s0636' => 'cru', 'Ca_00338_v3' => 'car', 'Ca_00542_v3' => 'car', 'Ca_01844_v3' => 'car', 'Ca_10611_v3' => 'car', 'Ca_13326_v3' => 'car', 'Ca_17944_v3' => 'car', 'Ca_18546_v3' => 'car', 'Ca_24219_v3' => 'car', 'Ca_29972_v3' => 'car', 'CBR_g3681' => 'cbr', 'CBR_g40021' => 'cbr', 'Cc01_g08140' => 'ccan', 'Cc02_g13410' => 'ccan', 'Cc02_g37480' => 'ccan', 'Cc05_g12030' => 'ccan', 'Cc09_g03370' => 'ccan', 'Cc09_g10300' => 'ccan', 'Cc10_g03530' => 'ccan', 'Cc10_g11380' => 'ccan', 'CDE01G0176' => 'cde', 'CDE02G0675' => 'cde', 'CDE02G0942' => 'cde', 'CDE02G1153' => 'cde', 'CDE02G4177' => 'cde', 'CDE04G2117' => 'cde', 'CDE04G2736' => 'cde', 'CDE08G1161' => 'cde', 'CDE09G1238' => 'cde', 'Cfa000467' => 'cfa', 'Cfa000947' => 'cfa', 'Cfa004969' => 'cfa', 'Cfa005284' => 'cfa', 'Cfa008993' => 'cfa', 'Cfa018187' => 'cfa', 'Cfa018454' => 'cfa', 'Cfa020585' => 'cfa', 'Ciclev10000424m.g' => 'ccl', 'Ciclev10003605m.g' => 'ccl', 'Ciclev10007828m.g' => 'ccl', 'Ciclev10014620m.g' => 'ccl', 'Ciclev10015169m.g' => 'ccl', 'Ciclev10018291m.g' => 'ccl', 'Ciclev10028256m.g' => 'ccl', 'Ciclev10033822m.g' => 'ccl', 'CiPaw.05G060300' => 'cil', 'CiPaw.05G085000' => 'cil', 'CiPaw.06G083700' => 'cil', 'CiPaw.06G120300' => 'cil', 'CiPaw.09G060500' => 'cil', 'CiPaw.09G123800' => 'cil', 'CiPaw.11G169700' => 'cil', 'CiPaw.12G118300' => 'cil', 'CiPaw.15G071000' => 'cil', 'CiPaw.15G081900' => 'cil', 'ClCG01G024610' => 'cla', 'ClCG03G006070' => 'cla', 'ClCG05G019250' => 'cla', 'ClCG09G009500' => 'cla', 'ClCG11G008200' => 'cla', 'ClCG11G018080' => 'cla', 'COL.COLO4_17373' => 'col', 'COL.COLO4_22994' => 'col', 'COL.COLO4_26389' => 'col', 'COL.COLO4_27170' => 'col', 'COL.COLO4_31074' => 'col', 'COL.COLO4_31465' => 'col', 'COL.COLO4_36438' => 'col', 'COL.COLO4_36439' => 'col', 'Cpa.g.c38781' => 'cpa', 'Cpa.g.sc128.12' => 'cpa', 'Cpa.g.sc166.7' => 'cpa', 'Cpa.g.sc166.8' => 'cpa', 'Cpa.g.sc20.111' => 'cpa', 'Cpa.g.sc27.31' => 'cpa', 'Cpa.g.sc64.36' => 'cpa', 'Cpa.g.sc64.37' => 'cpa', 'Cpa.g.sc66.49' => 'cpa', 'Cpa.g.sc80.64' => 'cpa', 'CsaV3_1G012320' => 'csa', 'CsaV3_2G008480' => 'csa', 'CsaV3_2G033450' => 'csa', 'CsaV3_3G044830' => 'csa', 'CsaV3_4G033710' => 'csa', 'CsaV3_6G051730' => 'csa', 'CsaV3_7G025350' => 'csa', 'CSS0001067' => 'camsi', 'CSS0005996' => 'camsi', 'CSS0006590' => 'camsi', 'CSS0009673' => 'camsi', 'CSS0010201' => 'camsi', 'CSS0010549' => 'camsi', 'CSS0011364' => 'camsi', 'CSS0014473' => 'camsi', 'CSS0014961' => 'camsi', 'CSS0020191' => 'camsi', 'CSS0021165' => 'camsi', 'CSS0022306' => 'camsi', 'CSS0030591' => 'camsi', 'CSS0030696' => 'camsi', 'CSS0032653' => 'camsi', 'CSS0037487' => 'camsi', 'CSS0041102' => 'camsi', 'CSS0041261' => 'camsi', 'CSS0046246' => 'camsi', 'CSS0049256' => 'camsi', 'DCAR_004075' => 'dca', 'DCAR_011538' => 'dca', 'DCAR_019553' => 'dca', 'DCAR_020952' => 'dca', 'DCAR_021739' => 'dca', 'DCAR_027407' => 'dca', 'DCAR_027913' => 'dca', 'DCAR_028066' => 'dca', 'Dinv05899' => 'din', 'Dinv07563' => 'din', 'Dinv08010' => 'din', 'Dinv14125' => 'din', 'Dinv20172' => 'din', 'Dinv30743' => 'din', 'Dinv31229' => 'din', 'Dinv34162' => 'din', 'Dinv36028' => 'din', 'Dinv39368' => 'din', 'Dinv40565' => 'din', 'Dinv41706' => 'din', 'Duzib052G0089' => 'dzi', 'Duzib116G0641' => 'dzi', 'Duzib132G0069' => 'dzi', 'Duzib132G1219' => 'dzi', 'Duzib147G0278' => 'dzi', 'Duzib160G0480' => 'dzi', 'Duzib170G0661' => 'dzi', 'Duzib177G0591' => 'dzi', 'Duzib187G1353' => 'dzi', 'Duzib192G0858' => 'dzi', 'Duzib192G0883' => 'dzi', 'Duzib213G0506' => 'dzi', 'Duzib235G0289' => 'dzi', 'Duzib251G0422' => 'dzi', 'ECA232G3898' => 'eca', 'ECA233G5950' => 'eca', 'ECA234G1699' => 'eca', 'ECA234G2421' => 'eca', 'ECA236G0426' => 'eca', 'ECA236G4331' => 'eca', 'ECA248G2573' => 'eca', 'EL10Ac1g00077' => 'bvu', 'EL10Ac1g01746' => 'bvu', 'EL10Ac2g03464' => 'bvu', 'EL10Ac4g08176' => 'bvu', 'EL10Ac7g17521' => 'bvu', 'EL10Ac8g20386' => 'bvu', 'EL10Ac9g21343' => 'bvu', 'EL10Ac9g22688' => 'bvu', 'Eucgr.B03434' => 'egr', 'Eucgr.D00618' => 'egr', 'Eucgr.E02395' => 'egr', 'Eucgr.F01129' => 'egr', 'Eucgr.F02622' => 'egr', 'Eucgr.F04207' => 'egr', 'FAN01G0570' => 'fan', 'FAN03G3351' => 'fan', 'FAN06G3702' => 'fan', 'FAN07G2149' => 'fan', 'FAN10G3758' => 'fan', 'FAN11G1170' => 'fan', 'FAN11G2050' => 'fan', 'FAN11G2724' => 'fan', 'FAN12G1700' => 'fan', 'FAN12G2028' => 'fan', 'FAN15G1160' => 'fan', 'FAN15G3063' => 'fan', 'FAN16G2540' => 'fan', 'FAN16G3077' => 'fan', 'FAN16G3624' => 'fan', 'FAN17G0221' => 'fan', 'FAN20G2492' => 'fan', 'FAN20G2905' => 'fan', 'FAN21G0548' => 'fan', 'FAN21G1300' => 'fan', 'FAN22G0077' => 'fan', 'FAN22G1315' => 'fan', 'FAN24G1280' => 'fan', 'FAN24G1445' => 'fan', 'FAN24G3527' => 'fan', 'FAN25G0464' => 'fan', 'FAN25G2885' => 'fan', 'FAN25G3270' => 'fan', 'FAN27G1101' => 'fan', 'FAN27G2846' => 'fan', 'FAN27G3524' => 'fan', 'FvH4_2g11770' => 'fve', 'FvH4_2g15630' => 'fve', 'FvH4_3g05570' => 'fve', 'FvH4_3g09110' => 'fve', 'FvH4_3g19940' => 'fve', 'FvH4_4g04821' => 'fve', 'FvH4_4g31480' => 'fve', 'FvH4_7g01740' => 'fve', 'Glyma.05G130400' => 'gma', 'Glyma.05G156400' => 'gma', 'Glyma.07G197000' => 'gma', 'Glyma.08G085151' => 'gma', 'Glyma.08G114500' => 'gma', 'Glyma.08G300400' => 'gma', 'Glyma.10G215800' => 'gma', 'Glyma.12G224400' => 'gma', 'Glyma.13G179300' => 'gma', 'Glyma.13G218151' => 'gma', 'Glyma.13G238800' => 'gma', 'Glyma.13G276900' => 'gma', 'Glyma.14G078200' => 'gma', 'Glyma.15G074500' => 'gma', 'Glyma.15G094100' => 'gma', 'Glyma.17G247200' => 'gma', 'Glyma.18G120100' => 'gma', 'Glyma.20G176000' => 'gma', 'Gohir.A01G063600' => 'ghi', 'Gohir.A01G170301' => 'ghi', 'Gohir.A02G060500' => 'ghi', 'Gohir.A05G133850' => 'ghi', 'Gohir.A05G161400' => 'ghi', 'Gohir.A06G012900' => 'ghi', 'Gohir.A06G035901' => 'ghi', 'Gohir.A06G127100' => 'ghi', 'Gohir.A06G210500' => 'ghi', 'Gohir.A08G008650' => 'ghi', 'Gohir.A09G072700' => 'ghi', 'Gohir.A09G088301' => 'ghi', 'Gohir.A10G040600' => 'ghi', 'Gohir.A12G036300' => 'ghi', 'Gohir.A12G143350' => 'ghi', 'Gohir.A12G165500' => 'ghi', 'Gohir.A13G145700' => 'ghi', 'Gohir.D01G050000' => 'ghi', 'Gohir.D01G051366' => 'ghi', 'Gohir.D01G161350' => 'ghi', 'Gohir.D02G065900' => 'ghi', 'Gohir.D05G164200' => 'ghi', 'Gohir.D05G355500' => 'ghi', 'Gohir.D06G010400' => 'ghi', 'Gohir.D06G111250' => 'ghi', 'Gohir.D06G132000' => 'ghi', 'Gohir.D06G210500' => 'ghi', 'Gohir.D07G165675' => 'ghi', 'Gohir.D08G062240' => 'ghi', 'Gohir.D08G086101' => 'ghi', 'Gohir.D08G138060' => 'ghi', 'Gohir.D09G072300' => 'ghi', 'Gohir.D10G041400' => 'ghi', 'Gohir.D11G191020' => 'ghi', 'Gohir.D11G212066' => 'ghi', 'Gohir.D12G036300' => 'ghi', 'Gohir.D12G168600' => 'ghi', 'Gohir.D13G150600' => 'ghi', 'Gorai.001G057300' => 'gra', 'Gorai.002G069900' => 'gra', 'Gorai.002G200000' => 'gra', 'Gorai.003G067600' => 'gra', 'Gorai.005G074800' => 'gra', 'Gorai.006G087300' => 'gra', 'Gorai.008G037500' => 'gra', 'Gorai.008G181400' => 'gra', 'Gorai.009G169400' => 'gra', 'Gorai.009G387900' => 'gra', 'Gorai.010G013300' => 'gra', 'Gorai.010G153800' => 'gra', 'Gorai.010G255800' => 'gra', 'Gorai.011G043700' => 'gra', 'Gorai.011G198900' => 'gra', 'Gorai.013G168400' => 'gra', 'GSVIVG01005212001' => 'vvi', 'GSVIVG01006163001' => 'vvi', 'GSVIVG01009625001' => 'vvi', 'GSVIVG01014338001' => 'vvi', 'GSVIVG01020005001' => 'vvi', 'GSVIVG01021450001' => 'vvi', 'GSVIVG01023975001' => 'vvi', 'GSVIVG01034490001' => 'vvi', 'HanXRQChr04g0112071' => 'han', 'HanXRQChr05g0131151' => 'han', 'HanXRQChr09g0262371' => 'han', 'HanXRQChr09g0268401' => 'han', 'HanXRQChr10g0279241' => 'han', 'HanXRQChr10g0297961' => 'han', 'HanXRQChr11g0326231' => 'han', 'HanXRQChr11g0328471' => 'han', 'HanXRQChr16g0507941' => 'han', 'HanXRQChr17g0560211' => 'han', 'Haze_02108' => 'cav', 'Haze_02428' => 'cav', 'Haze_05593' => 'cav', 'Haze_06448' => 'cav', 'Haze_09427' => 'cav', 'Haze_12022' => 'cav', 'Haze_17612' => 'cav', 'Haze_17928' => 'cav', 'Hma1.2p1_0032F.1_g019250' => 'hma', 'Hma1.2p1_0163F.1_g072690' => 'hma', 'Hma1.2p1_0265F.1_g106710' => 'hma', 'Hma1.2p1_0286F.1_g113970' => 'hma', 'Hma1.2p1_0363F.1_g136640' => 'hma', 'Hma1.2p1_0584F.1_g183470' => 'hma', 'Hma1.2p1_0885F.1_g232570' => 'hma', 'HPP92_006022' => 'vpl', 'HPP92_007320' => 'vpl', 'HPP92_011521' => 'vpl', 'HPP92_019387' => 'vpl', 'HPP92_024038' => 'vpl', 'Hund05891' => 'sun', 'Hund06450' => 'sun', 'Hund12053' => 'sun', 'Hund16800' => 'sun', 'Hund21222' => 'sun', 'Hund22896' => 'sun', 'Hund23746' => 'sun', 'Hund27083' => 'sun', 'Lalb_Chr02g0141831' => 'lal', 'Lalb_Chr02g0141841' => 'lal', 'Lalb_Chr05g0220411' => 'lal', 'Lalb_Chr06g0162081' => 'lal', 'Lalb_Chr09g0327651' => 'lal', 'Lalb_Chr13g0295051' => 'lal', 'Lalb_Chr15g0086801' => 'lal', 'Lalb_Chr16g0383781' => 'lal', 'Lalb_Chr16g0383791' => 'lal', 'Lalb_Chr18g0055441' => 'lal', 'Lalb_Chr18g0059611' => 'lal', 'Lalb_Chr20g0109661' => 'lal', 'Lalb_Chr20g0109831' => 'lal', 'Lalb_Chr20g0121871' => 'lal', 'Lalb_Chr22g0355361' => 'lal', 'Lalb_Chr25g0286371' => 'lal', 'Lj1A1187G43' => 'lonja', 'Lj1A1205T50' => 'lonja', 'Lj1A800G33' => 'lonja', 'Lj1C1187T7' => 'lonja', 'Lj1C843T11' => 'lonja', 'Lj1g0010940' => 'lja', 'Lj2A288T69' => 'lonja', 'Lj3g0024276' => 'lja', 'Lj4A47T76' => 'lonja', 'Lj4g0005805' => 'lja', 'Lj4g0006097' => 'lja', 'Lj4g0008528' => 'lja', 'Lj4g0024907' => 'lja', 'Lj5g0012472' => 'lja', 'Lj5g0018648' => 'lja', 'Lj6C789G1' => 'lonja', 'Lj6g0004000' => 'lja', 'Lj7A292G67' => 'lonja', 'Lj7A292T64' => 'lonja', 'Lj9A400T58' => 'lonja', 'Lsat_1_v5_gn_1_126181' => 'lsa', 'Lsat_1_v5_gn_4_123041' => 'lsa', 'Lsat_1_v5_gn_4_133620' => 'lsa', 'Lsat_1_v5_gn_4_53221' => 'lsa', 'Lsat_1_v5_gn_4_71961' => 'lsa', 'Lsat_1_v5_gn_7_105241' => 'lsa', 'Lsat_1_v5_gn_7_21361' => 'lsa', 'Lsat_1_v5_gn_7_28860' => 'lsa', 'Lsat_1_v5_gn_7_31260' => 'lsa', 'Lsat_1_v5_gn_8_52801' => 'lsa', 'Manes.02G191400' => 'mes', 'Manes.03G110100' => 'mes', 'Manes.04G071100' => 'mes', 'Manes.05G100500' => 'mes', 'Manes.05G164700' => 'mes', 'Manes.15G087000' => 'mes', 'Manes.15G121500' => 'mes', 'Manes.16G028300' => 'mes', 'Manes.17G046100' => 'mes', 'Manes.17G069800' => 'mes', 'Manes.18G100500' => 'mes', 'Mapoly0002s0109' => 'mpo', 'Mapoly0024s0007' => 'mpo', 'Mapoly0089s0032' => 'mpo', 'MBI04_g42241_MAGBIO' => 'mbi', 'MBI05_g11988_MAGBIO' => 'mbi', 'MBI05_g35452_MAGBIO' => 'mbi', 'MBI07_g30179_MAGBIO' => 'mbi', 'MBI07_g35859_MAGBIO' => 'mbi', 'MBI07_g35860_MAGBIO' => 'mbi', 'MBI07_g37166_MAGBIO' => 'mbi', 'MBI08_g18172_MAGBIO' => 'mbi', 'MBI09_g08441_MAGBIO' => 'mbi', 'MBI13_g01676_MAGBIO' => 'mbi', 'MBI14_g42955_MAGBIO' => 'mbi', 'MBI16_g13161_MAGBIO' => 'mbi', 'MBI17_g27204_MAGBIO' => 'mbi', 'MBI19_g21595_MAGBIO' => 'mbi', 'MD00G1148400' => 'mdo', 'MD02G1301200' => 'mdo', 'MD03G1227800' => 'mdo', 'MD05G1041100' => 'mdo', 'MD05G1124800' => 'mdo', 'MD05G1284000' => 'mdo', 'MD05G1338800' => 'mdo', 'MD05G1338900' => 'mdo', 'MD07G1022800' => 'mdo', 'MD10G1047500' => 'mdo', 'MD10G1127500' => 'mdo', 'MD10G1262300' => 'mdo', 'MD10G1293800' => 'mdo', 'MD16G1074300' => 'mdo', 'Medtr1g021670' => 'mtr', 'Medtr1g096320' => 'mtr', 'Medtr2g013690' => 'mtr', 'Medtr2g019450' => 'mtr', 'Medtr2g085170' => 'mtr', 'Medtr4g088785' => 'mtr', 'Medtr8g055930' => 'mtr', 'Medtr8g085850' => 'mtr', 'MELO3C002605.2' => 'cme', 'MELO3C003891.2' => 'cme', 'MELO3C004012.2' => 'cme', 'MELO3C007134.2' => 'cme', 'MELO3C008118.2' => 'cme', 'MELO3C016700.2' => 'cme', 'MELO3C024127.2' => 'cme', 'MELO3C033361.2' => 'cme', 'MELO3C033362.2' => 'cme', 'Migut.C00430' => 'egut', 'Migut.C01246' => 'egut', 'Migut.E00101' => 'egut', 'Migut.H01486' => 'egut', 'Migut.H01939' => 'egut', 'Migut.K00360' => 'egut', 'Migut.M00910' => 'egut', 'Migut.M01139' => 'egut', 'Migut.N02677' => 'egut', 'MSTRG.13252' => 'ama', 'MSTRG.14701' => 'ama', 'MSTRG.1521' => 'ama', 'MSTRG.15884' => 'ama', 'MSTRG.16242' => 'ama', 'MSTRG.22285' => 'ama', 'MSTRG.22444' => 'ama', 'MSTRG.2349' => 'ama', 'MSTRG.26308' => 'ama', 'MSTRG.28296' => 'ama', 'MSTRG.9895' => 'ama', 'Nitab4.5_0000110g0060' => 'nta', 'Nitab4.5_0000420g0130' => 'nta', 'Nitab4.5_0000422g0030' => 'nta', 'Nitab4.5_0000560g0180' => 'nta', 'Nitab4.5_0000703g0100' => 'nta', 'Nitab4.5_0000786g0200' => 'nta', 'Nitab4.5_0001336g0020' => 'nta', 'Nitab4.5_0001796g0030' => 'nta', 'Nitab4.5_0003348g0060' => 'nta', 'Nitab4.5_0003698g0040' => 'nta', 'Nitab4.5_0003942g0090' => 'nta', 'Nitab4.5_0004775g0070' => 'nta', 'Nitab4.5_0004864g0030' => 'nta', 'Nitab4.5_0005615g0020' => 'nta', 'Nitab4.5_0009288g0030' => 'nta', 'Nitab4.5_0009341g0010' => 'nta', 'Nitab4.5_0009535g0010' => 'nta', 'Nn1g03995' => 'nnu', 'Nn1g04100' => 'nnu', 'Nn1g06530' => 'nnu', 'Nn3g16404' => 'nnu', 'Nn3g17212' => 'nnu', 'Nn3g20776' => 'nnu', 'Nn3g21923' => 'nnu', 'Nn5g27737' => 'nnu', 'Nn5g29461' => 'nnu', 'Nn7g38355' => 'nnu', 'Nn8g39873' => 'nnu', 'Oeu000548.2' => 'oeu', 'Oeu004672.1' => 'oeu', 'Oeu015605.2' => 'oeu', 'Oeu016092.1' => 'oeu', 'Oeu017879.3' => 'oeu', 'Oeu024910.1' => 'oeu', 'Oeu028965.1' => 'oeu', 'Oeu031269.1' => 'oeu', 'Oeu031270.1' => 'oeu', 'Oeu032535.1' => 'oeu', 'Oeu034151.1' => 'oeu', 'Oeu034152.1' => 'oeu', 'Oeu034588.2' => 'oeu', 'Oeu050846.1' => 'oeu', 'Oeu050849.2' => 'oeu', 'Oeu051063.2' => 'oeu', 'Oeu052368.1' => 'oeu', 'Oeu052370.1' => 'oeu', 'Os01g0210400' => 'osa', 'Os01g0304300' => 'osa', 'Os01g0749100' => 'osa', 'Os02g0745800' => 'osa', 'Os03g0769050' => 'osa', 'Os05g0531500' => 'osa', 'Os06g0724300' => 'osa', 'Os11g0198100' => 'osa', 'Peaxi162Scf00069g01425' => 'pax', 'Peaxi162Scf00280g00811' => 'pax', 'Peaxi162Scf00310g00615' => 'pax', 'Peaxi162Scf00362g00542' => 'pax', 'Peaxi162Scf00461g00310' => 'pax', 'Peaxi162Scf00530g00118' => 'pax', 'Peaxi162Scf00541g00057' => 'pax', 'Peaxi162Scf00661g00017' => 'pax', 'Peaxi162Scf00926g00027' => 'pax', 'Peaxi162Scf01064g00263' => 'pax', 'Peaxi162Scf01211g00135' => 'pax', 'PGR004G2336' => 'pgr', 'PGR042G0327' => 'pgr', 'PGR042G1957' => 'pgr', 'PGR042G2003' => 'pgr', 'PGR042G3929' => 'pgr', 'PGR083G1137' => 'pgr', 'PGR083G1364' => 'pgr', 'PGSC0003DMG400003381' => 'stu', 'PGSC0003DMG400003417' => 'stu', 'PGSC0003DMG400008981' => 'stu', 'PGSC0003DMG400012417' => 'stu', 'PGSC0003DMG400012823' => 'stu', 'PGSC0003DMG400016885' => 'stu', 'PGSC0003DMG400022812' => 'stu', 'PGSC0003DMG400029726' => 'stu', 'PGSC0003DMG401009243' => 'stu', 'PGSC0003DMG401031505' => 'stu', 'PGSC0003DMG402031505' => 'stu', 'Phvul.001G017600' => 'pvu', 'Phvul.002G193500' => 'pvu', 'Phvul.002G228900' => 'pvu', 'Phvul.002G236800' => 'pvu', 'Phvul.003G049500' => 'pvu', 'Phvul.005G072000' => 'pvu', 'Phvul.006G164800' => 'pvu', 'Phvul.006G185100' => 'pvu', 'Phvul.007G090000' => 'pvu', 'Potri.001G399800' => 'ptr', 'Potri.002G149900' => 'ptr', 'Potri.004G044100' => 'ptr', 'Potri.004G177600' => 'ptr', 'Potri.009G138000' => 'ptr', 'Potri.010G094000' => 'ptr', 'Potri.011G053000' => 'ptr', 'Potri.011G119300' => 'ptr', 'Potri.013G113700' => 'ptr', 'Potri.018G107800' => 'ptr', 'Potri.019G084100' => 'ptr', 'Pp3c14_23720' => 'ppa', 'Pp3c16_6340' => 'ppa', 'Pp3c23_13420' => 'ppa', 'Pp3c24_2740' => 'ppa', 'Pp3c25_860' => 'ppa', 'Pp3c8_21750' => 'ppa', 'Prupe.1G273000' => 'ppe', 'Prupe.1G273700' => 'ppe', 'Prupe.1G274100' => 'ppe', 'Prupe.2G023300' => 'ppe', 'Prupe.4G048000' => 'ppe', 'Prupe.4G080400' => 'ppe', 'Prupe.4G181200' => 'ppe', 'Prupe.8G056900' => 'ppe', 'Prupe.8G168700' => 'ppe', 'Psat1g189080' => 'psa', 'Psat1g204760' => 'psa', 'Psat4g175560' => 'psa', 'Psat4g177720' => 'psa', 'Psat5g244240' => 'psa', 'Psat6g010720' => 'psa', 'Psat6g187200' => 'psa', 'Psat7g072040' => 'psa', 'PSO017G3501' => 'pso', 'PSO063G2148' => 'pso', 'PSO063G5608' => 'pso', 'PSO210G6392' => 'pso', 'PSO541G2319' => 'pso', 'PSO541G2836' => 'pso', 'PSO541G4012' => 'pso', 'PSO541G6253' => 'pso', 'PSO675G0580' => 'pso', 'PSO675G0856' => 'pso', 'PSO675G5635' => 'pso', 'PSO675G9157' => 'pso', 'PSO832G1660' => 'pso', 'PSO832G1969' => 'pso', 'QL02p007186' => 'qlo', 'QL02p033904' => 'qlo', 'QL03p064391' => 'qlo', 'QL05p040593' => 'qlo', 'QL05p058242' => 'qlo', 'QL08p021825' => 'qlo', 'QL11p004981' => 'qlo', 'RcHm_v2.0_Chr1g0318301' => 'rch', 'RcHm_v2.0_Chr4g0418501' => 'rch', 'RcHm_v2.0_Chr4g0439971' => 'rch', 'RcHm_v2.0_Chr5g0008541' => 'rch', 'RcHm_v2.0_Chr5g0014101' => 'rch', 'RcHm_v2.0_Chr5g0014131' => 'rch', 'RcHm_v2.0_Chr5g0033621' => 'rch', 'RcHm_v2.0_Chr6g0272041' => 'rch', 'RcHm_v2.0_Chr6g0278831' => 'rch', 'Rhsim02G0130400' => 'rsi', 'Rhsim02G0171100' => 'rsi', 'Rhsim05G0053000' => 'rsi', 'Rhsim05G0053100' => 'rsi', 'Rhsim06G0096500' => 'rsi', 'Rhsim06G0096600' => 'rsi', 'Rhsim06G0199100' => 'rsi', 'Rhsim12G0062300' => 'rsi', 'Rhsim12G0062800' => 'rsi', 'Sabra02G0118600' => 'sbr', 'Sabra04G0027300' => 'sbr', 'Sabra04G0119500' => 'sbr', 'Sabra08G0112500' => 'sbr', 'Sabra11G0036800' => 'sbr', 'Sabra11G0103800' => 'sbr', 'Sabra13G0096300' => 'sbr', 'Sabra16G0262300' => 'sbr', 'Sabra18G0091700' => 'sbr', 'Sabra19G0095400' => 'sbr', 'SalBow6G3080' => 'sbo', 'SalBow7G1157' => 'sbo', 'SalBow7G2123' => 'sbo', 'SalBow7G2285' => 'sbo', 'SalBow7G3537' => 'sbo', 'SalBow8G2947' => 'sbo', 'SalBow8G4463' => 'sbo', 'SalBow8G5466' => 'sbo', 'Sc01g0001750' => 'sci', 'Sc02g0006640' => 'sci', 'Sc02g0006670' => 'sci', 'Sc04g0008220' => 'sci', 'Sc05g0006190' => 'sci', 'Sc08g0002760' => 'sci', 'Sc17g0006170' => 'sci', 'Sc22g0002050' => 'sci', 'Sc23g0001190' => 'sci', 'Sc24g0000980' => 'sci', 'Sed0006245' => 'sed', 'Sed0007543' => 'sed', 'Sed0009411' => 'sed', 'Sed0010765' => 'sed', 'Sed0012944' => 'sed', 'Sed0014682' => 'sed', 'Sed0016174' => 'sed', 'Sed0016796' => 'sed', 'Sed0020317' => 'sed', 'Sed0021467' => 'sed', 'SEGI_01316' => 'sgi', 'SEGI_03374' => 'sgi', 'SEGI_16265' => 'sgi', 'SEGI_18569' => 'sgi', 'SEGI_20351' => 'sgi', 'SEGI_26395' => 'sgi', 'SEGI_29469' => 'sgi', 'SEGI_34771' => 'sgi', 'SEGI_36769' => 'sgi', 'SEGI_37139' => 'sgi', 'SGA_v2.0_scaffold100G29687' => 'sas', 'SGA_v2.0_scaffold118G32472' => 'sas', 'SGA_v2.0_scaffold14G07051' => 'sas', 'SGA_v2.0_scaffold183G39845' => 'sas', 'SGA_v2.0_scaffold1G00174' => 'sas', 'SGA_v2.0_scaffold22G09714' => 'sas', 'SGA_v2.0_scaffold333G48992' => 'sas', 'SGA_v2.0_scaffold46G17491' => 'sas', 'SGA_v2.0_scaffold49G18294' => 'sas', 'SGA_v2.0_scaffold63G21658' => 'sas', 'SHI01741' => 'shi', 'SHI05771' => 'shi', 'SHI18077' => 'shi', 'SHI20525' => 'shi', 'SHI20527' => 'shi', 'SHI20528' => 'shi', 'SMO172G0185' => 'smo', 'SMO198G0020' => 'smo', 'SMO351G0006' => 'smo', 'SMO356G0118' => 'smo', 'SMO358G0296' => 'smo', 'SMO367G0079' => 'smo', 'SMO367G1277' => 'smo', 'Solyc01g014220.3' => 'sly', 'Solyc01g111770.2' => 'sly', 'Solyc02g078180.3' => 'sly', 'Solyc03g006430.3' => 'sly', 'Solyc03g006456.1' => 'sly', 'Solyc03g079860.2' => 'sly', 'Solyc04g079770.3' => 'sly', 'Solyc05g007430.4' => 'sly', 'Solyc07g063150.3' => 'sly', 'Solyc08g016620.3' => 'sly', 'Solyc09g057590.3' => 'sly', 'Solyc09g057600.1' => 'sly', 'Solyc10g009050.3' => 'sly', 'Solyc11g017420.2' => 'sly', 'Sopen01g053810' => 'spe', 'Sopen02g023040' => 'spe', 'Sopen03g002440' => 'spe', 'Sopen04g033350' => 'spe', 'Sopen05g003310' => 'spe', 'Sopen07g004050' => 'spe', 'Sopen07g031340' => 'spe', 'Sopen08g006990' => 'spe', 'Sopen10g004830' => 'spe', 'Sopen11g009370' => 'spe', 'Sp1g24450' => 'spa', 'Sp1g29670' => 'spa', 'Sp1g39600' => 'spa', 'Sp2g11080' => 'spa', 'Sp2g13970' => 'spa', 'Sp4g16130' => 'spa', 'Sp6g13080' => 'spa', 'Sp7g37270' => 'spa', 'TAR371G0065' => 'tar', 'TAR376G0340' => 'tar', 'TAR376G0435' => 'tar', 'TAR381G0002' => 'tar', 'TAR381G1236' => 'tar', 'TAR624G0055' => 'tar', 'TAR624G0324' => 'tar', 'TAR624G0696' => 'tar', 'TAR624G0906' => 'tar', 'TAR625G0107' => 'tar', 'TAR626G0015' => 'tar', 'TAR626G1356' => 'tar', 'TAR627G0888' => 'tar', 'TAR628G0399' => 'tar', 'TAR628G1327' => 'tar', 'TAR629G2831' => 'tar', 'TAR629G2874' => 'tar', 'TAR633G1432' => 'tar', 'TAR633G2771' => 'tar', 'THA.LOC104803394' => 'tha', 'THA.LOC104805153' => 'tha', 'THA.LOC104806784' => 'tha', 'THA.LOC104810473' => 'tha', 'THA.LOC104813100' => 'tha', 'THA.LOC104814215' => 'tha', 'THA.LOC104815554' => 'tha', 'THA.LOC104820544' => 'tha', 'THA.LOC104824754' => 'tha', 'THA.LOC104827717' => 'tha', 'Thecc.02G031400' => 'tca', 'Thecc.02G055900' => 'tca', 'Thecc.02G350800' => 'tca', 'Thecc.06G150900' => 'tca', 'Thecc.06G186600' => 'tca', 'Thecc.07G089600' => 'tca', 'Thecc.08G020400' => 'tca', 'Thecc.08G182100' => 'tca', 'Thhalv10000873m.g' => 'esa', 'Thhalv10004185m.g' => 'esa', 'Thhalv10006981m.g' => 'esa', 'Thhalv10007204m.g' => 'esa', 'Thhalv10011374m.g' => 'esa', 'Thhalv10013482m.g' => 'esa', 'Thhalv10017801m.g' => 'esa', 'Thhalv10024983m.g' => 'esa', 'TPR.G12072' => 'tpr', 'TPR.G15769' => 'tpr', 'TPR.G16504' => 'tpr', 'TPR.G16506' => 'tpr', 'TPR.G24345' => 'tpr', 'TPR.G26666' => 'tpr', 'TPR.G27320' => 'tpr', 'TPR.G31819' => 'tpr', 'TPR.G38879' => 'tpr', 'TPR.G39015' => 'tpr', 'TPR.G8819' => 'tpr', 'TWI09G0924' => 'twi', 'TWI12G0811' => 'twi', 'TWI12G1294' => 'twi', 'TWI31G0150' => 'twi', 'TWI36G1262' => 'twi', 'TWI38G1287' => 'twi', 'TWI38G1633' => 'twi', 'TWI38G1982' => 'twi', 'TWI39G0116' => 'twi', 'TWI60G1011' => 'twi', 'TWI63G0171' => 'twi', 'TWI73G0839' => 'twi', 'TWI79G1511' => 'twi', 'unitig_0.g915' => 'ugi', 'unitig_0.g916' => 'ugi', 'unitig_21.g20219' => 'ugi', 'unitig_21.g20416' => 'ugi', 'unitig_578.g16132' => 'ugi', 'unitig_578.g16718' => 'ugi', 'unitig_62.g23481' => 'ugi', 'unitig_744.g24535' => 'ugi', 'unitig_749.g13525' => 'ugi', 'vmacro01248' => 'vma', 'vmacro02290' => 'vma', 'vmacro10946' => 'vma', 'vmacro11865' => 'vma', 'vmacro12493' => 'vma', 'vmacro17322' => 'vma', 'vmacro21599' => 'vma', 'vmacro23041' => 'vma', 'VMungo0251G0004' => 'vmu', 'VMungo0251G2639' => 'vmu', 'VMungo0251G2967' => 'vmu', 'VMungo0540G0864' => 'vmu', 'VMungo0540G1569' => 'vmu', 'VMungo0647G0317' => 'vmu', 'VMungo0720G1373' => 'vmu', 'VMungo0720G1508' => 'vmu', 'VMungo1080G0485' => 'vmu', 'VMungo1215G3177' => 'vmu', 'Zm00001eb112600' => 'zma', 'Zm00001eb120220' => 'zma', 'Zm00001eb153240' => 'zma', 'Zm00001eb168880' => 'zma', 'Zm00001eb213920' => 'zma', 'Zm00001eb228280' => 'zma', 'Zm00001eb254580' => 'zma', 'Zm00001eb272180' => 'zma', 'Zm00001eb293190' => 'zma', 'Zm00001eb322930' => 'zma', 'Zm00001eb353360' => 'zma', 'Zm00001eb353390' => 'zma', 'Zm00001eb353430' => 'zma', 'Zm00001eb353440' => 'zma', 'Zm00001eb353780' => 'zma' ) $gf_id = 'HOM05D000499' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000499' ) $data_identifier = 'HOM05D000499' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 29, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 12, 'amhyb' => (int) 8, 'aly' => (int) 12, 'aox' => (int) 9, 'arhy' => (int) 26, 'ath' => (int) 8, 'atr' => (int) 7, 'acertr' => (int) 10, 'cqu' => (int) 15, 'bca' => (int) 29, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 11, 'cansat' => (int) 8, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 9, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 8, 'cpa' => (int) 10, 'csa' => (int) 7, 'camsi' => (int) 20, 'dca' => (int) 8, 'din' => (int) 12, 'dzi' => (int) 14, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 6, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 38, 'gra' => (int) 16, 'vvi' => (int) 8, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 5, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 11, 'lja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 11, 'mpo' => (int) 3, 'mbi' => (int) 14, 'mdo' => (int) 14, 'mtr' => (int) 8, 'cme' => (int) 9, 'egut' => (int) 9, 'ama' => (int) 11, 'nta' => (int) 17, 'nnu' => (int) 11, 'oeu' => (int) 18, 'osa' => (int) 8, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 6, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 9, 'rsi' => (int) 9, 'sbr' => (int) 10, 'sbo' => (int) 8, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 10, 'sas' => (int) 10, 'shi' => (int) 6, 'smo' => (int) 7, 'sly' => (int) 14, 'spe' => (int) 10, 'spa' => (int) 8, 'tar' => (int) 19, 'tha' => (int) 10, 'tca' => (int) 8, 'esa' => (int) 8, 'tpr' => (int) 11, 'twi' => (int) 13, 'ugi' => (int) 9, 'vma' => (int) 8, 'vmu' => (int) 10, 'zma' => (int) 15 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb353780' $species_info = array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ) $local_species = 'camsi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000499', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1066', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p29780' => 'bna', 'A02p33180' => 'bna', 'A03p16470' => 'bna', 'A03p66010' => 'bna', 'A04p25970' => 'bna', 'A06p01270' => 'bna', 'A06p46080' => 'bna', 'A07p11400' => 'bna', 'A08p01840' => 'bna', 'A08p08230' => 'bna', 'A08p25740' => 'bna', 'A09p32070' => 'bna', 'A09p37830' => 'bna', 'A09p42840' => 'bna', 'A09p42850' => 'bna', 'Aa31LG10G2060' => 'aar', 'Aa31LG2G7410' => 'aar', 'Aa31LG6G10200' => 'aar', 'Aa31LG6G16680' => 'aar', 'Aa31LG6G8470' => 'aar', 'Aa31LG9G12730' => 'aar', 'Aa31LG9G13680' => 'aar', 'Aa31LG9G14920' => 'aar', 'Aa31LG9G6650' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4977' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5467' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3254' => 'aag', 'Actinidia02578' => 'ach', 'Actinidia07693' => 'ach', 'Actinidia08413' => 'ach', 'Actinidia08414' => 'ach', 'Actinidia15289' => 'ach', 'Actinidia19871' => 'ach', 'Actinidia21475' => 'ach', 'Actinidia22576' => 'ach', 'Actinidia28327' => 'ach', 'Actinidia32491' => 'ach', 'Actinidia39463' => 'ach', 'Actinidia39571' => 'ach', 'Ah.01g013750' => 'amhyb', 'Ah.01g023210' => 'amhyb', 'Ah.04g164850' => 'amhyb', 'Ah.05g178060' => 'amhyb', 'Ah.07g204270' => 'amhyb', 'Ah.07g208480' => 'amhyb', 'Ah.09g237410' => 'amhyb', 'Ah.14g089460' => 'amhyb', 'AL1G41790' => 'aly', 'AL1G49050' => 'aly', 'AL1G53810' => 'aly', 'AL1G61400' => 'aly', 'AL4G18580' => 'aly', 'AL5G12510' => 'aly', 'AL5G12540' => 'aly', 'AL6G43230' => 'aly', 'AL7G10370' => 'aly', 'AL7G19250' => 'aly', 'AL8G12240' => 'aly', 'AL8G18540' => 'aly', 'Aqoxy1G02409' => 'aox', 'Aqoxy2G03993' => 'aox', 'Aqoxy3G03357' => 'aox', 'Aqoxy4G00785' => 'aox', 'Aqoxy5G02598' => 'aox', 'Aqoxy6G00132' => 'aox', 'Aqoxy7G01776' => 'aox', 'Aqoxy7G02316' => 'aox', 'Aqoxy7G03973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.12AFKW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B8730' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27IQR1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3F75VG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3RE0GA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41TCQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.527VTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FIR39' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5W8UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DA38EV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ63HS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H1I32C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HC27T5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4M8AP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7N3CZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9UVDZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LS1NQA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT1D4B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SKC4TM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCFV76' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF9Q1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQWD9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1ZM88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WE07RT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YCK7VH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJE6Q6' => 'arhy', 'AT1G28240' => 'ath', 'AT1G34550' => 'ath', 'AT1G53040' => 'ath', 'AT2G02910' => 'ath', 'AT4G09630' => 'ath', 'AT4G38500' => 'ath', 'AT5G42660' => 'ath', 'AT5G46220' => 'ath', 'ATR0152G026' => 'atr', 'ATR0564G343' => 'atr', 'ATR0706G151' => 'atr', 'ATR0733G207' => 'atr', 'ATR0751G234' => 'atr', 'ATR0807G048' => 'atr', 'ATR1091G084' => 'atr', 'Atru.chr10.1229' => 'acertr', 'Atru.chr10.1230' => 'acertr', 'Atru.chr10.1874' => 'acertr', 'Atru.chr11.1808' => 'acertr', 'Atru.chr13.1795' => 'acertr', 'Atru.chr13.570' => 'acertr', 'Atru.chr2.2608' => 'acertr', 'Atru.chr2.2609' => 'acertr', 'Atru.chr5.3428' => 'acertr', 'Atru.chr8.1171' => 'acertr', 'AUR62004651' => 'cqu', 'AUR62008675' => 'cqu', 'AUR62010014' => 'cqu', 'AUR62013004' => 'cqu', 'AUR62014825' => 'cqu', 'AUR62015015' => 'cqu', 'AUR62015151' => 'cqu', 'AUR62017020' => 'cqu', 'AUR62019422' => 'cqu', 'AUR62023570' => 'cqu', 'AUR62025571' => 'cqu', 'AUR62029098' => 'cqu', 'AUR62033863' => 'cqu', 'AUR62034296' => 'cqu', 'AUR62040075' => 'cqu', 'BcaB02g07334' => 'bca', 'BcaB02g10575' => 'bca', 'BcaB03g12119' => 'bca', 'BcaB03g12120' => 'bca', 'BcaB03g13945' => 'bca', 'BcaB04g17123' => 'bca', 'BcaB04g17867' => 'bca', 'BcaB04g19839' => 'bca', 'BcaB07g30317' => 'bca', 'BcaB07g32432' => 'bca', 'BcaB07g33362' => 'bca', 'BcaB08g36611' => 'bca', 'BcaC01g00028' => 'bca', 'BcaC01g01356' => 'bca', 'BcaC01g02034' => 'bca', 'BcaC01g06051' => 'bca', 'BcaC03g16839' => 'bca', 'BcaC03g17176' => 'bca', 'BcaC05g26829' => 'bca', 'BcaC06g31490' => 'bca', 'BcaC06g35344' => 'bca', 'BcaC06g36570' => 'bca', 'BcaC07g37537' => 'bca', 'BcaC08g43491' => 'bca', 'BcaC08g43773' => 'bca', 'BcaNung00234' => 'bca', 'BcaNung01982' => 'bca', 'BcaNung03707' => 'bca', 'BcaNung06454' => 'bca', 'BolC2t10762H' => 'bol', 'BolC2t11191H' => 'bol', 'BolC3t14322H' => 'bol', 'BolC3t19747H' => 'bol', 'BolC3t21425H' => 'bol', 'BolC4t27800H' => 'bol', 'BolC5t31423H' => 'bol', 'BolC6t35951H' => 'bol', 'BolC6t36282H' => 'bol', 'BolC7t40678H' => 'bol', 'BolC7t40679H' => 'bol', 'BolC7t42222H' => 'bol', 'BolC7t43492H' => 'bol', 'BolC7t46785H' => 'bol', 'BolC8t47853H' => 'bol', 'BolC9t56805H' => 'bol', 'BraA02t08000Z' => 'bra', 'BraA02t08341Z' => 'bra', 'BraA03t10936Z' => 'bra', 'BraA03t15657Z' => 'bra', 'BraA04t18100Z' => 'bra', 'BraA05t20523Z' => 'bra', 'BraA06t23353Z' => 'bra', 'BraA06t27473Z' => 'bra', 'BraA06t27769Z' => 'bra', 'BraA07t28928Z' => 'bra', 'BraA08t32236Z' => 'bra', 'BraA08t32841Z' => 'bra', 'BraA08t34524Z' => 'bra', 'BraA09t38742Z' => 'bra', 'BraA09t39295Z' => 'bra', 'C02p47180' => 'bna', 'C02p50990' => 'bna', 'C03p19360' => 'bna', 'C03p74950' => 'bna', 'C03p91000' => 'bna', 'C04p63260' => 'bna', 'C05p27050' => 'bna', 'C06p08750' => 'bna', 'C06p11490' => 'bna', 'C07p02820' => 'bna', 'C07p17180' => 'bna', 'C07p29440' => 'bna', 'C07p63730' => 'bna', 'C09p39260' => 'bna', 'CAN.G1164.34' => 'can', 'CAN.G1164.39' => 'can', 'CAN.G1530.3' => 'can', 'CAN.G162.61' => 'can', 'CAN.G176.6' => 'can', 'CAN.G289.49' => 'can', 'CAN.G370.21' => 'can', 'CAN.G370.22' => 'can', 'CAN.G371.117' => 'can', 'CAN.G58.37' => 'can', 'CAN.G588.98' => 'can', 'CANSAT21G2266' => 'cansat', 'CANSAT25G2799' => 'cansat', 'CANSAT35G0862' => 'cansat', 'CANSAT35G1704' => 'cansat', 'CANSAT35G1760' => 'cansat', 'CANSAT56G3971' => 'cansat', 'CANSAT56G4116' => 'cansat', 'CANSAT80G1259' => 'cansat', 'CARHR027730' => 'chi', 'CARHR033880' => 'chi', 'CARHR043270' => 'chi', 'CARHR145330' => 'chi', 'CARHR145340' => 'chi', 'CARHR175570' => 'chi', 'CARHR181570' => 'chi', 'CARHR258470' => 'chi', 'CARHR260490' => 'chi', 'CARHR294220' => 'chi', 'Carub.0001s2668' => 'cru', 'Carub.0001s3257' => 'cru', 'Carub.0001s4220' => 'cru', 'Carub.0005s0179' => 'cru', 'Carub.0006s2807' => 'cru', 'Carub.0007s0039' => 'cru', 'Carub.0008s0169' => 'cru', 'Carub.0008s0636' => 'cru', 'Ca_00338_v3' => 'car', 'Ca_00542_v3' => 'car', 'Ca_01844_v3' => 'car', 'Ca_10611_v3' => 'car', 'Ca_13326_v3' => 'car', 'Ca_17944_v3' => 'car', 'Ca_18546_v3' => 'car', 'Ca_24219_v3' => 'car', 'Ca_29972_v3' => 'car', 'CBR_g3681' => 'cbr', 'CBR_g40021' => 'cbr', 'Cc01_g08140' => 'ccan', 'Cc02_g13410' => 'ccan', 'Cc02_g37480' => 'ccan', 'Cc05_g12030' => 'ccan', 'Cc09_g03370' => 'ccan', 'Cc09_g10300' => 'ccan', 'Cc10_g03530' => 'ccan', 'Cc10_g11380' => 'ccan', 'CDE01G0176' => 'cde', 'CDE02G0675' => 'cde', 'CDE02G0942' => 'cde', 'CDE02G1153' => 'cde', 'CDE02G4177' => 'cde', 'CDE04G2117' => 'cde', 'CDE04G2736' => 'cde', 'CDE08G1161' => 'cde', 'CDE09G1238' => 'cde', 'Cfa000467' => 'cfa', 'Cfa000947' => 'cfa', 'Cfa004969' => 'cfa', 'Cfa005284' => 'cfa', 'Cfa008993' => 'cfa', 'Cfa018187' => 'cfa', 'Cfa018454' => 'cfa', 'Cfa020585' => 'cfa', 'Ciclev10000424m.g' => 'ccl', 'Ciclev10003605m.g' => 'ccl', 'Ciclev10007828m.g' => 'ccl', 'Ciclev10014620m.g' => 'ccl', 'Ciclev10015169m.g' => 'ccl', 'Ciclev10018291m.g' => 'ccl', 'Ciclev10028256m.g' => 'ccl', 'Ciclev10033822m.g' => 'ccl', 'CiPaw.05G060300' => 'cil', 'CiPaw.05G085000' => 'cil', 'CiPaw.06G083700' => 'cil', 'CiPaw.06G120300' => 'cil', 'CiPaw.09G060500' => 'cil', 'CiPaw.09G123800' => 'cil', 'CiPaw.11G169700' => 'cil', 'CiPaw.12G118300' => 'cil', 'CiPaw.15G071000' => 'cil', 'CiPaw.15G081900' => 'cil', 'ClCG01G024610' => 'cla', 'ClCG03G006070' => 'cla', 'ClCG05G019250' => 'cla', 'ClCG09G009500' => 'cla', 'ClCG11G008200' => 'cla', 'ClCG11G018080' => 'cla', 'COL.COLO4_17373' => 'col', 'COL.COLO4_22994' => 'col', 'COL.COLO4_26389' => 'col', 'COL.COLO4_27170' => 'col', 'COL.COLO4_31074' => 'col', 'COL.COLO4_31465' => 'col', 'COL.COLO4_36438' => 'col', 'COL.COLO4_36439' => 'col', 'Cpa.g.c38781' => 'cpa', 'Cpa.g.sc128.12' => 'cpa', 'Cpa.g.sc166.7' => 'cpa', 'Cpa.g.sc166.8' => 'cpa', 'Cpa.g.sc20.111' => 'cpa', 'Cpa.g.sc27.31' => 'cpa', 'Cpa.g.sc64.36' => 'cpa', 'Cpa.g.sc64.37' => 'cpa', 'Cpa.g.sc66.49' => 'cpa', 'Cpa.g.sc80.64' => 'cpa', 'CsaV3_1G012320' => 'csa', 'CsaV3_2G008480' => 'csa', 'CsaV3_2G033450' => 'csa', 'CsaV3_3G044830' => 'csa', 'CsaV3_4G033710' => 'csa', 'CsaV3_6G051730' => 'csa', 'CsaV3_7G025350' => 'csa', 'CSS0001067' => 'camsi', 'CSS0005996' => 'camsi', 'CSS0006590' => 'camsi', 'CSS0009673' => 'camsi', 'CSS0010201' => 'camsi', 'CSS0010549' => 'camsi', 'CSS0011364' => 'camsi', 'CSS0014473' => 'camsi', 'CSS0014961' => 'camsi', 'CSS0020191' => 'camsi', 'CSS0021165' => 'camsi', 'CSS0022306' => 'camsi', 'CSS0030591' => 'camsi', 'CSS0030696' => 'camsi', 'CSS0032653' => 'camsi', 'CSS0037487' => 'camsi', 'CSS0041102' => 'camsi', 'CSS0041261' => 'camsi', 'CSS0046246' => 'camsi', 'CSS0049256' => 'camsi', 'DCAR_004075' => 'dca', 'DCAR_011538' => 'dca', 'DCAR_019553' => 'dca', 'DCAR_020952' => 'dca', 'DCAR_021739' => 'dca', 'DCAR_027407' => 'dca', 'DCAR_027913' => 'dca', 'DCAR_028066' => 'dca', 'Dinv05899' => 'din', 'Dinv07563' => 'din', 'Dinv08010' => 'din', 'Dinv14125' => 'din', 'Dinv20172' => 'din', 'Dinv30743' => 'din', 'Dinv31229' => 'din', 'Dinv34162' => 'din', 'Dinv36028' => 'din', 'Dinv39368' => 'din', 'Dinv40565' => 'din', 'Dinv41706' => 'din', 'Duzib052G0089' => 'dzi', 'Duzib116G0641' => 'dzi', 'Duzib132G0069' => 'dzi', 'Duzib132G1219' => 'dzi', 'Duzib147G0278' => 'dzi', 'Duzib160G0480' => 'dzi', 'Duzib170G0661' => 'dzi', 'Duzib177G0591' => 'dzi', 'Duzib187G1353' => 'dzi', 'Duzib192G0858' => 'dzi', 'Duzib192G0883' => 'dzi', 'Duzib213G0506' => 'dzi', 'Duzib235G0289' => 'dzi', 'Duzib251G0422' => 'dzi', 'ECA232G3898' => 'eca', 'ECA233G5950' => 'eca', 'ECA234G1699' => 'eca', 'ECA234G2421' => 'eca', 'ECA236G0426' => 'eca', 'ECA236G4331' => 'eca', 'ECA248G2573' => 'eca', 'EL10Ac1g00077' => 'bvu', 'EL10Ac1g01746' => 'bvu', 'EL10Ac2g03464' => 'bvu', 'EL10Ac4g08176' => 'bvu', 'EL10Ac7g17521' => 'bvu', 'EL10Ac8g20386' => 'bvu', 'EL10Ac9g21343' => 'bvu', 'EL10Ac9g22688' => 'bvu', 'Eucgr.B03434' => 'egr', 'Eucgr.D00618' => 'egr', 'Eucgr.E02395' => 'egr', 'Eucgr.F01129' => 'egr', 'Eucgr.F02622' => 'egr', 'Eucgr.F04207' => 'egr', 'FAN01G0570' => 'fan', 'FAN03G3351' => 'fan', 'FAN06G3702' => 'fan', 'FAN07G2149' => 'fan', 'FAN10G3758' => 'fan', 'FAN11G1170' => 'fan', 'FAN11G2050' => 'fan', 'FAN11G2724' => 'fan', 'FAN12G1700' => 'fan', 'FAN12G2028' => 'fan', 'FAN15G1160' => 'fan', 'FAN15G3063' => 'fan', 'FAN16G2540' => 'fan', 'FAN16G3077' => 'fan', 'FAN16G3624' => 'fan', 'FAN17G0221' => 'fan', 'FAN20G2492' => 'fan', 'FAN20G2905' => 'fan', 'FAN21G0548' => 'fan', 'FAN21G1300' => 'fan', 'FAN22G0077' => 'fan', 'FAN22G1315' => 'fan', 'FAN24G1280' => 'fan', 'FAN24G1445' => 'fan', 'FAN24G3527' => 'fan', 'FAN25G0464' => 'fan', 'FAN25G2885' => 'fan', 'FAN25G3270' => 'fan', 'FAN27G1101' => 'fan', 'FAN27G2846' => 'fan', 'FAN27G3524' => 'fan', 'FvH4_2g11770' => 'fve', 'FvH4_2g15630' => 'fve', 'FvH4_3g05570' => 'fve', 'FvH4_3g09110' => 'fve', 'FvH4_3g19940' => 'fve', 'FvH4_4g04821' => 'fve', 'FvH4_4g31480' => 'fve', 'FvH4_7g01740' => 'fve', 'Glyma.05G130400' => 'gma', 'Glyma.05G156400' => 'gma', 'Glyma.07G197000' => 'gma', 'Glyma.08G085151' => 'gma', 'Glyma.08G114500' => 'gma', 'Glyma.08G300400' => 'gma', 'Glyma.10G215800' => 'gma', 'Glyma.12G224400' => 'gma', 'Glyma.13G179300' => 'gma', 'Glyma.13G218151' => 'gma', 'Glyma.13G238800' => 'gma', 'Glyma.13G276900' => 'gma', 'Glyma.14G078200' => 'gma', 'Glyma.15G074500' => 'gma', 'Glyma.15G094100' => 'gma', 'Glyma.17G247200' => 'gma', 'Glyma.18G120100' => 'gma', 'Glyma.20G176000' => 'gma', 'Gohir.A01G063600' => 'ghi', 'Gohir.A01G170301' => 'ghi', 'Gohir.A02G060500' => 'ghi', 'Gohir.A05G133850' => 'ghi', 'Gohir.A05G161400' => 'ghi', 'Gohir.A06G012900' => 'ghi', 'Gohir.A06G035901' => 'ghi', 'Gohir.A06G127100' => 'ghi', 'Gohir.A06G210500' => 'ghi', 'Gohir.A08G008650' => 'ghi', 'Gohir.A09G072700' => 'ghi', 'Gohir.A09G088301' => 'ghi', 'Gohir.A10G040600' => 'ghi', 'Gohir.A12G036300' => 'ghi', 'Gohir.A12G143350' => 'ghi', 'Gohir.A12G165500' => 'ghi', 'Gohir.A13G145700' => 'ghi', 'Gohir.D01G050000' => 'ghi', 'Gohir.D01G051366' => 'ghi', 'Gohir.D01G161350' => 'ghi', 'Gohir.D02G065900' => 'ghi', 'Gohir.D05G164200' => 'ghi', 'Gohir.D05G355500' => 'ghi', 'Gohir.D06G010400' => 'ghi', 'Gohir.D06G111250' => 'ghi', 'Gohir.D06G132000' => 'ghi', 'Gohir.D06G210500' => 'ghi', 'Gohir.D07G165675' => 'ghi', 'Gohir.D08G062240' => 'ghi', 'Gohir.D08G086101' => 'ghi', 'Gohir.D08G138060' => 'ghi', 'Gohir.D09G072300' => 'ghi', 'Gohir.D10G041400' => 'ghi', 'Gohir.D11G191020' => 'ghi', 'Gohir.D11G212066' => 'ghi', 'Gohir.D12G036300' => 'ghi', 'Gohir.D12G168600' => 'ghi', 'Gohir.D13G150600' => 'ghi', 'Gorai.001G057300' => 'gra', 'Gorai.002G069900' => 'gra', 'Gorai.002G200000' => 'gra', 'Gorai.003G067600' => 'gra', 'Gorai.005G074800' => 'gra', 'Gorai.006G087300' => 'gra', 'Gorai.008G037500' => 'gra', 'Gorai.008G181400' => 'gra', 'Gorai.009G169400' => 'gra', 'Gorai.009G387900' => 'gra', 'Gorai.010G013300' => 'gra', 'Gorai.010G153800' => 'gra', 'Gorai.010G255800' => 'gra', 'Gorai.011G043700' => 'gra', 'Gorai.011G198900' => 'gra', 'Gorai.013G168400' => 'gra', 'GSVIVG01005212001' => 'vvi', 'GSVIVG01006163001' => 'vvi', 'GSVIVG01009625001' => 'vvi', 'GSVIVG01014338001' => 'vvi', 'GSVIVG01020005001' => 'vvi', 'GSVIVG01021450001' => 'vvi', 'GSVIVG01023975001' => 'vvi', 'GSVIVG01034490001' => 'vvi', 'HanXRQChr04g0112071' => 'han', 'HanXRQChr05g0131151' => 'han', 'HanXRQChr09g0262371' => 'han', 'HanXRQChr09g0268401' => 'han', 'HanXRQChr10g0279241' => 'han', 'HanXRQChr10g0297961' => 'han', 'HanXRQChr11g0326231' => 'han', 'HanXRQChr11g0328471' => 'han', 'HanXRQChr16g0507941' => 'han', 'HanXRQChr17g0560211' => 'han', 'Haze_02108' => 'cav', 'Haze_02428' => 'cav', 'Haze_05593' => 'cav', 'Haze_06448' => 'cav', 'Haze_09427' => 'cav', 'Haze_12022' => 'cav', 'Haze_17612' => 'cav', 'Haze_17928' => 'cav', 'Hma1.2p1_0032F.1_g019250' => 'hma', 'Hma1.2p1_0163F.1_g072690' => 'hma', 'Hma1.2p1_0265F.1_g106710' => 'hma', 'Hma1.2p1_0286F.1_g113970' => 'hma', 'Hma1.2p1_0363F.1_g136640' => 'hma', 'Hma1.2p1_0584F.1_g183470' => 'hma', 'Hma1.2p1_0885F.1_g232570' => 'hma', 'HPP92_006022' => 'vpl', 'HPP92_007320' => 'vpl', 'HPP92_011521' => 'vpl', 'HPP92_019387' => 'vpl', 'HPP92_024038' => 'vpl', 'Hund05891' => 'sun', 'Hund06450' => 'sun', 'Hund12053' => 'sun', 'Hund16800' => 'sun', 'Hund21222' => 'sun', 'Hund22896' => 'sun', 'Hund23746' => 'sun', 'Hund27083' => 'sun', 'Lalb_Chr02g0141831' => 'lal', 'Lalb_Chr02g0141841' => 'lal', 'Lalb_Chr05g0220411' => 'lal', 'Lalb_Chr06g0162081' => 'lal', 'Lalb_Chr09g0327651' => 'lal', 'Lalb_Chr13g0295051' => 'lal', 'Lalb_Chr15g0086801' => 'lal', 'Lalb_Chr16g0383781' => 'lal', 'Lalb_Chr16g0383791' => 'lal', 'Lalb_Chr18g0055441' => 'lal', 'Lalb_Chr18g0059611' => 'lal', 'Lalb_Chr20g0109661' => 'lal', 'Lalb_Chr20g0109831' => 'lal', 'Lalb_Chr20g0121871' => 'lal', 'Lalb_Chr22g0355361' => 'lal', 'Lalb_Chr25g0286371' => 'lal', 'Lj1A1187G43' => 'lonja', 'Lj1A1205T50' => 'lonja', 'Lj1A800G33' => 'lonja', 'Lj1C1187T7' => 'lonja', 'Lj1C843T11' => 'lonja', 'Lj1g0010940' => 'lja', 'Lj2A288T69' => 'lonja', 'Lj3g0024276' => 'lja', 'Lj4A47T76' => 'lonja', 'Lj4g0005805' => 'lja', 'Lj4g0006097' => 'lja', 'Lj4g0008528' => 'lja', 'Lj4g0024907' => 'lja', 'Lj5g0012472' => 'lja', 'Lj5g0018648' => 'lja', 'Lj6C789G1' => 'lonja', 'Lj6g0004000' => 'lja', 'Lj7A292G67' => 'lonja', 'Lj7A292T64' => 'lonja', 'Lj9A400T58' => 'lonja', 'Lsat_1_v5_gn_1_126181' => 'lsa', 'Lsat_1_v5_gn_4_123041' => 'lsa', 'Lsat_1_v5_gn_4_133620' => 'lsa', 'Lsat_1_v5_gn_4_53221' => 'lsa', 'Lsat_1_v5_gn_4_71961' => 'lsa', 'Lsat_1_v5_gn_7_105241' => 'lsa', 'Lsat_1_v5_gn_7_21361' => 'lsa', 'Lsat_1_v5_gn_7_28860' => 'lsa', 'Lsat_1_v5_gn_7_31260' => 'lsa', 'Lsat_1_v5_gn_8_52801' => 'lsa', 'Manes.02G191400' => 'mes', 'Manes.03G110100' => 'mes', 'Manes.04G071100' => 'mes', 'Manes.05G100500' => 'mes', 'Manes.05G164700' => 'mes', 'Manes.15G087000' => 'mes', 'Manes.15G121500' => 'mes', 'Manes.16G028300' => 'mes', 'Manes.17G046100' => 'mes', 'Manes.17G069800' => 'mes', 'Manes.18G100500' => 'mes', 'Mapoly0002s0109' => 'mpo', 'Mapoly0024s0007' => 'mpo', 'Mapoly0089s0032' => 'mpo', 'MBI04_g42241_MAGBIO' => 'mbi', 'MBI05_g11988_MAGBIO' => 'mbi', 'MBI05_g35452_MAGBIO' => 'mbi', 'MBI07_g30179_MAGBIO' => 'mbi', 'MBI07_g35859_MAGBIO' => 'mbi', 'MBI07_g35860_MAGBIO' => 'mbi', 'MBI07_g37166_MAGBIO' => 'mbi', 'MBI08_g18172_MAGBIO' => 'mbi', 'MBI09_g08441_MAGBIO' => 'mbi', 'MBI13_g01676_MAGBIO' => 'mbi', 'MBI14_g42955_MAGBIO' => 'mbi', 'MBI16_g13161_MAGBIO' => 'mbi', 'MBI17_g27204_MAGBIO' => 'mbi', 'MBI19_g21595_MAGBIO' => 'mbi', 'MD00G1148400' => 'mdo', 'MD02G1301200' => 'mdo', 'MD03G1227800' => 'mdo', 'MD05G1041100' => 'mdo', 'MD05G1124800' => 'mdo', 'MD05G1284000' => 'mdo', 'MD05G1338800' => 'mdo', 'MD05G1338900' => 'mdo', 'MD07G1022800' => 'mdo', 'MD10G1047500' => 'mdo', 'MD10G1127500' => 'mdo', 'MD10G1262300' => 'mdo', 'MD10G1293800' => 'mdo', 'MD16G1074300' => 'mdo', 'Medtr1g021670' => 'mtr', 'Medtr1g096320' => 'mtr', 'Medtr2g013690' => 'mtr', 'Medtr2g019450' => 'mtr', 'Medtr2g085170' => 'mtr', 'Medtr4g088785' => 'mtr', 'Medtr8g055930' => 'mtr', 'Medtr8g085850' => 'mtr', 'MELO3C002605.2' => 'cme', 'MELO3C003891.2' => 'cme', 'MELO3C004012.2' => 'cme', 'MELO3C007134.2' => 'cme', 'MELO3C008118.2' => 'cme', 'MELO3C016700.2' => 'cme', 'MELO3C024127.2' => 'cme', 'MELO3C033361.2' => 'cme', 'MELO3C033362.2' => 'cme', 'Migut.C00430' => 'egut', 'Migut.C01246' => 'egut', 'Migut.E00101' => 'egut', 'Migut.H01486' => 'egut', 'Migut.H01939' => 'egut', 'Migut.K00360' => 'egut', 'Migut.M00910' => 'egut', 'Migut.M01139' => 'egut', 'Migut.N02677' => 'egut', 'MSTRG.13252' => 'ama', 'MSTRG.14701' => 'ama', 'MSTRG.1521' => 'ama', 'MSTRG.15884' => 'ama', 'MSTRG.16242' => 'ama', 'MSTRG.22285' => 'ama', 'MSTRG.22444' => 'ama', 'MSTRG.2349' => 'ama', 'MSTRG.26308' => 'ama', 'MSTRG.28296' => 'ama', 'MSTRG.9895' => 'ama', 'Nitab4.5_0000110g0060' => 'nta', 'Nitab4.5_0000420g0130' => 'nta', 'Nitab4.5_0000422g0030' => 'nta', 'Nitab4.5_0000560g0180' => 'nta', 'Nitab4.5_0000703g0100' => 'nta', 'Nitab4.5_0000786g0200' => 'nta', 'Nitab4.5_0001336g0020' => 'nta', 'Nitab4.5_0001796g0030' => 'nta', 'Nitab4.5_0003348g0060' => 'nta', 'Nitab4.5_0003698g0040' => 'nta', 'Nitab4.5_0003942g0090' => 'nta', 'Nitab4.5_0004775g0070' => 'nta', 'Nitab4.5_0004864g0030' => 'nta', 'Nitab4.5_0005615g0020' => 'nta', 'Nitab4.5_0009288g0030' => 'nta', 'Nitab4.5_0009341g0010' => 'nta', 'Nitab4.5_0009535g0010' => 'nta', 'Nn1g03995' => 'nnu', 'Nn1g04100' => 'nnu', 'Nn1g06530' => 'nnu', 'Nn3g16404' => 'nnu', 'Nn3g17212' => 'nnu', 'Nn3g20776' => 'nnu', 'Nn3g21923' => 'nnu', 'Nn5g27737' => 'nnu', 'Nn5g29461' => 'nnu', 'Nn7g38355' => 'nnu', 'Nn8g39873' => 'nnu', 'Oeu000548.2' => 'oeu', 'Oeu004672.1' => 'oeu', 'Oeu015605.2' => 'oeu', 'Oeu016092.1' => 'oeu', 'Oeu017879.3' => 'oeu', 'Oeu024910.1' => 'oeu', 'Oeu028965.1' => 'oeu', 'Oeu031269.1' => 'oeu', 'Oeu031270.1' => 'oeu', 'Oeu032535.1' => 'oeu', 'Oeu034151.1' => 'oeu', 'Oeu034152.1' => 'oeu', 'Oeu034588.2' => 'oeu', 'Oeu050846.1' => 'oeu', 'Oeu050849.2' => 'oeu', 'Oeu051063.2' => 'oeu', 'Oeu052368.1' => 'oeu', 'Oeu052370.1' => 'oeu', 'Os01g0210400' => 'osa', 'Os01g0304300' => 'osa', 'Os01g0749100' => 'osa', 'Os02g0745800' => 'osa', 'Os03g0769050' => 'osa', 'Os05g0531500' => 'osa', 'Os06g0724300' => 'osa', 'Os11g0198100' => 'osa', 'Peaxi162Scf00069g01425' => 'pax', 'Peaxi162Scf00280g00811' => 'pax', 'Peaxi162Scf00310g00615' => 'pax', 'Peaxi162Scf00362g00542' => 'pax', 'Peaxi162Scf00461g00310' => 'pax', 'Peaxi162Scf00530g00118' => 'pax', 'Peaxi162Scf00541g00057' => 'pax', 'Peaxi162Scf00661g00017' => 'pax', 'Peaxi162Scf00926g00027' => 'pax', 'Peaxi162Scf01064g00263' => 'pax', 'Peaxi162Scf01211g00135' => 'pax', 'PGR004G2336' => 'pgr', 'PGR042G0327' => 'pgr', 'PGR042G1957' => 'pgr', 'PGR042G2003' => 'pgr', 'PGR042G3929' => 'pgr', 'PGR083G1137' => 'pgr', 'PGR083G1364' => 'pgr', 'PGSC0003DMG400003381' => 'stu', 'PGSC0003DMG400003417' => 'stu', 'PGSC0003DMG400008981' => 'stu', 'PGSC0003DMG400012417' => 'stu', 'PGSC0003DMG400012823' => 'stu', 'PGSC0003DMG400016885' => 'stu', 'PGSC0003DMG400022812' => 'stu', 'PGSC0003DMG400029726' => 'stu', 'PGSC0003DMG401009243' => 'stu', 'PGSC0003DMG401031505' => 'stu', 'PGSC0003DMG402031505' => 'stu', 'Phvul.001G017600' => 'pvu', 'Phvul.002G193500' => 'pvu', 'Phvul.002G228900' => 'pvu', 'Phvul.002G236800' => 'pvu', 'Phvul.003G049500' => 'pvu', 'Phvul.005G072000' => 'pvu', 'Phvul.006G164800' => 'pvu', 'Phvul.006G185100' => 'pvu', 'Phvul.007G090000' => 'pvu', 'Potri.001G399800' => 'ptr', 'Potri.002G149900' => 'ptr', 'Potri.004G044100' => 'ptr', 'Potri.004G177600' => 'ptr', 'Potri.009G138000' => 'ptr', 'Potri.010G094000' => 'ptr', 'Potri.011G053000' => 'ptr', 'Potri.011G119300' => 'ptr', 'Potri.013G113700' => 'ptr', 'Potri.018G107800' => 'ptr', 'Potri.019G084100' => 'ptr', 'Pp3c14_23720' => 'ppa', 'Pp3c16_6340' => 'ppa', 'Pp3c23_13420' => 'ppa', 'Pp3c24_2740' => 'ppa', 'Pp3c25_860' => 'ppa', 'Pp3c8_21750' => 'ppa', 'Prupe.1G273000' => 'ppe', 'Prupe.1G273700' => 'ppe', 'Prupe.1G274100' => 'ppe', 'Prupe.2G023300' => 'ppe', 'Prupe.4G048000' => 'ppe', 'Prupe.4G080400' => 'ppe', 'Prupe.4G181200' => 'ppe', 'Prupe.8G056900' => 'ppe', 'Prupe.8G168700' => 'ppe', 'Psat1g189080' => 'psa', 'Psat1g204760' => 'psa', 'Psat4g175560' => 'psa', 'Psat4g177720' => 'psa', 'Psat5g244240' => 'psa', 'Psat6g010720' => 'psa', 'Psat6g187200' => 'psa', 'Psat7g072040' => 'psa', 'PSO017G3501' => 'pso', 'PSO063G2148' => 'pso', 'PSO063G5608' => 'pso', 'PSO210G6392' => 'pso', 'PSO541G2319' => 'pso', 'PSO541G2836' => 'pso', 'PSO541G4012' => 'pso', 'PSO541G6253' => 'pso', 'PSO675G0580' => 'pso', 'PSO675G0856' => 'pso', 'PSO675G5635' => 'pso', 'PSO675G9157' => 'pso', 'PSO832G1660' => 'pso', 'PSO832G1969' => 'pso', 'QL02p007186' => 'qlo', 'QL02p033904' => 'qlo', 'QL03p064391' => 'qlo', 'QL05p040593' => 'qlo', 'QL05p058242' => 'qlo', 'QL08p021825' => 'qlo', 'QL11p004981' => 'qlo', 'RcHm_v2.0_Chr1g0318301' => 'rch', 'RcHm_v2.0_Chr4g0418501' => 'rch', 'RcHm_v2.0_Chr4g0439971' => 'rch', 'RcHm_v2.0_Chr5g0008541' => 'rch', 'RcHm_v2.0_Chr5g0014101' => 'rch', 'RcHm_v2.0_Chr5g0014131' => 'rch', 'RcHm_v2.0_Chr5g0033621' => 'rch', 'RcHm_v2.0_Chr6g0272041' => 'rch', 'RcHm_v2.0_Chr6g0278831' => 'rch', 'Rhsim02G0130400' => 'rsi', 'Rhsim02G0171100' => 'rsi', 'Rhsim05G0053000' => 'rsi', 'Rhsim05G0053100' => 'rsi', 'Rhsim06G0096500' => 'rsi', 'Rhsim06G0096600' => 'rsi', 'Rhsim06G0199100' => 'rsi', 'Rhsim12G0062300' => 'rsi', 'Rhsim12G0062800' => 'rsi', 'Sabra02G0118600' => 'sbr', 'Sabra04G0027300' => 'sbr', 'Sabra04G0119500' => 'sbr', 'Sabra08G0112500' => 'sbr', 'Sabra11G0036800' => 'sbr', 'Sabra11G0103800' => 'sbr', 'Sabra13G0096300' => 'sbr', 'Sabra16G0262300' => 'sbr', 'Sabra18G0091700' => 'sbr', 'Sabra19G0095400' => 'sbr', 'SalBow6G3080' => 'sbo', 'SalBow7G1157' => 'sbo', 'SalBow7G2123' => 'sbo', 'SalBow7G2285' => 'sbo', 'SalBow7G3537' => 'sbo', 'SalBow8G2947' => 'sbo', 'SalBow8G4463' => 'sbo', 'SalBow8G5466' => 'sbo', 'Sc01g0001750' => 'sci', 'Sc02g0006640' => 'sci', 'Sc02g0006670' => 'sci', 'Sc04g0008220' => 'sci', 'Sc05g0006190' => 'sci', 'Sc08g0002760' => 'sci', 'Sc17g0006170' => 'sci', 'Sc22g0002050' => 'sci', 'Sc23g0001190' => 'sci', 'Sc24g0000980' => 'sci', 'Sed0006245' => 'sed', 'Sed0007543' => 'sed', 'Sed0009411' => 'sed', 'Sed0010765' => 'sed', 'Sed0012944' => 'sed', 'Sed0014682' => 'sed', 'Sed0016174' => 'sed', 'Sed0016796' => 'sed', 'Sed0020317' => 'sed', 'Sed0021467' => 'sed', 'SEGI_01316' => 'sgi', 'SEGI_03374' => 'sgi', 'SEGI_16265' => 'sgi', 'SEGI_18569' => 'sgi', 'SEGI_20351' => 'sgi', 'SEGI_26395' => 'sgi', 'SEGI_29469' => 'sgi', 'SEGI_34771' => 'sgi', 'SEGI_36769' => 'sgi', 'SEGI_37139' => 'sgi', 'SGA_v2.0_scaffold100G29687' => 'sas', 'SGA_v2.0_scaffold118G32472' => 'sas', 'SGA_v2.0_scaffold14G07051' => 'sas', 'SGA_v2.0_scaffold183G39845' => 'sas', 'SGA_v2.0_scaffold1G00174' => 'sas', 'SGA_v2.0_scaffold22G09714' => 'sas', 'SGA_v2.0_scaffold333G48992' => 'sas', 'SGA_v2.0_scaffold46G17491' => 'sas', 'SGA_v2.0_scaffold49G18294' => 'sas', 'SGA_v2.0_scaffold63G21658' => 'sas', 'SHI01741' => 'shi', 'SHI05771' => 'shi', 'SHI18077' => 'shi', 'SHI20525' => 'shi', 'SHI20527' => 'shi', 'SHI20528' => 'shi', 'SMO172G0185' => 'smo', 'SMO198G0020' => 'smo', 'SMO351G0006' => 'smo', 'SMO356G0118' => 'smo', 'SMO358G0296' => 'smo', 'SMO367G0079' => 'smo', 'SMO367G1277' => 'smo', 'Solyc01g014220.3' => 'sly', 'Solyc01g111770.2' => 'sly', 'Solyc02g078180.3' => 'sly', 'Solyc03g006430.3' => 'sly', 'Solyc03g006456.1' => 'sly', 'Solyc03g079860.2' => 'sly', 'Solyc04g079770.3' => 'sly', 'Solyc05g007430.4' => 'sly', 'Solyc07g063150.3' => 'sly', 'Solyc08g016620.3' => 'sly', 'Solyc09g057590.3' => 'sly', 'Solyc09g057600.1' => 'sly', 'Solyc10g009050.3' => 'sly', 'Solyc11g017420.2' => 'sly', 'Sopen01g053810' => 'spe', 'Sopen02g023040' => 'spe', 'Sopen03g002440' => 'spe', 'Sopen04g033350' => 'spe', 'Sopen05g003310' => 'spe', 'Sopen07g004050' => 'spe', 'Sopen07g031340' => 'spe', 'Sopen08g006990' => 'spe', 'Sopen10g004830' => 'spe', 'Sopen11g009370' => 'spe', 'Sp1g24450' => 'spa', 'Sp1g29670' => 'spa', 'Sp1g39600' => 'spa', 'Sp2g11080' => 'spa', 'Sp2g13970' => 'spa', 'Sp4g16130' => 'spa', 'Sp6g13080' => 'spa', 'Sp7g37270' => 'spa', 'TAR371G0065' => 'tar', 'TAR376G0340' => 'tar', 'TAR376G0435' => 'tar', 'TAR381G0002' => 'tar', 'TAR381G1236' => 'tar', 'TAR624G0055' => 'tar', 'TAR624G0324' => 'tar', 'TAR624G0696' => 'tar', 'TAR624G0906' => 'tar', 'TAR625G0107' => 'tar', 'TAR626G0015' => 'tar', 'TAR626G1356' => 'tar', 'TAR627G0888' => 'tar', 'TAR628G0399' => 'tar', 'TAR628G1327' => 'tar', 'TAR629G2831' => 'tar', 'TAR629G2874' => 'tar', 'TAR633G1432' => 'tar', 'TAR633G2771' => 'tar', 'THA.LOC104803394' => 'tha', 'THA.LOC104805153' => 'tha', 'THA.LOC104806784' => 'tha', 'THA.LOC104810473' => 'tha', 'THA.LOC104813100' => 'tha', 'THA.LOC104814215' => 'tha', 'THA.LOC104815554' => 'tha', 'THA.LOC104820544' => 'tha', 'THA.LOC104824754' => 'tha', 'THA.LOC104827717' => 'tha', 'Thecc.02G031400' => 'tca', 'Thecc.02G055900' => 'tca', 'Thecc.02G350800' => 'tca', 'Thecc.06G150900' => 'tca', 'Thecc.06G186600' => 'tca', 'Thecc.07G089600' => 'tca', 'Thecc.08G020400' => 'tca', 'Thecc.08G182100' => 'tca', 'Thhalv10000873m.g' => 'esa', 'Thhalv10004185m.g' => 'esa', 'Thhalv10006981m.g' => 'esa', 'Thhalv10007204m.g' => 'esa', 'Thhalv10011374m.g' => 'esa', 'Thhalv10013482m.g' => 'esa', 'Thhalv10017801m.g' => 'esa', 'Thhalv10024983m.g' => 'esa', 'TPR.G12072' => 'tpr', 'TPR.G15769' => 'tpr', 'TPR.G16504' => 'tpr', 'TPR.G16506' => 'tpr', 'TPR.G24345' => 'tpr', 'TPR.G26666' => 'tpr', 'TPR.G27320' => 'tpr', 'TPR.G31819' => 'tpr', 'TPR.G38879' => 'tpr', 'TPR.G39015' => 'tpr', 'TPR.G8819' => 'tpr', 'TWI09G0924' => 'twi', 'TWI12G0811' => 'twi', 'TWI12G1294' => 'twi', 'TWI31G0150' => 'twi', 'TWI36G1262' => 'twi', 'TWI38G1287' => 'twi', 'TWI38G1633' => 'twi', 'TWI38G1982' => 'twi', 'TWI39G0116' => 'twi', 'TWI60G1011' => 'twi', 'TWI63G0171' => 'twi', 'TWI73G0839' => 'twi', 'TWI79G1511' => 'twi', 'unitig_0.g915' => 'ugi', 'unitig_0.g916' => 'ugi', 'unitig_21.g20219' => 'ugi', 'unitig_21.g20416' => 'ugi', 'unitig_578.g16132' => 'ugi', 'unitig_578.g16718' => 'ugi', 'unitig_62.g23481' => 'ugi', 'unitig_744.g24535' => 'ugi', 'unitig_749.g13525' => 'ugi', 'vmacro01248' => 'vma', 'vmacro02290' => 'vma', 'vmacro10946' => 'vma', 'vmacro11865' => 'vma', 'vmacro12493' => 'vma', 'vmacro17322' => 'vma', 'vmacro21599' => 'vma', 'vmacro23041' => 'vma', 'VMungo0251G0004' => 'vmu', 'VMungo0251G2639' => 'vmu', 'VMungo0251G2967' => 'vmu', 'VMungo0540G0864' => 'vmu', 'VMungo0540G1569' => 'vmu', 'VMungo0647G0317' => 'vmu', 'VMungo0720G1373' => 'vmu', 'VMungo0720G1508' => 'vmu', 'VMungo1080G0485' => 'vmu', 'VMungo1215G3177' => 'vmu', 'Zm00001eb112600' => 'zma', 'Zm00001eb120220' => 'zma', 'Zm00001eb153240' => 'zma', 'Zm00001eb168880' => 'zma', 'Zm00001eb213920' => 'zma', 'Zm00001eb228280' => 'zma', 'Zm00001eb254580' => 'zma', 'Zm00001eb272180' => 'zma', 'Zm00001eb293190' => 'zma', 'Zm00001eb322930' => 'zma', 'Zm00001eb353360' => 'zma', 'Zm00001eb353390' => 'zma', 'Zm00001eb353430' => 'zma', 'Zm00001eb353440' => 'zma', 'Zm00001eb353780' => 'zma' ), 'gf_id' => 'HOM05D000499', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000499' ), 'data_identifier' => 'HOM05D000499', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000499', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1066', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p29780' => 'bna', 'A02p33180' => 'bna', 'A03p16470' => 'bna', 'A03p66010' => 'bna', 'A04p25970' => 'bna', 'A06p01270' => 'bna', 'A06p46080' => 'bna', 'A07p11400' => 'bna', 'A08p01840' => 'bna', 'A08p08230' => 'bna', 'A08p25740' => 'bna', 'A09p32070' => 'bna', 'A09p37830' => 'bna', 'A09p42840' => 'bna', 'A09p42850' => 'bna', 'Aa31LG10G2060' => 'aar', 'Aa31LG2G7410' => 'aar', 'Aa31LG6G10200' => 'aar', 'Aa31LG6G16680' => 'aar', 'Aa31LG6G8470' => 'aar', 'Aa31LG9G12730' => 'aar', 'Aa31LG9G13680' => 'aar', 'Aa31LG9G14920' => 'aar', 'Aa31LG9G6650' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4977' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5467' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3254' => 'aag', 'Actinidia02578' => 'ach', 'Actinidia07693' => 'ach', 'Actinidia08413' => 'ach', 'Actinidia08414' => 'ach', 'Actinidia15289' => 'ach', 'Actinidia19871' => 'ach', 'Actinidia21475' => 'ach', 'Actinidia22576' => 'ach', 'Actinidia28327' => 'ach', 'Actinidia32491' => 'ach', 'Actinidia39463' => 'ach', 'Actinidia39571' => 'ach', 'Ah.01g013750' => 'amhyb', 'Ah.01g023210' => 'amhyb', 'Ah.04g164850' => 'amhyb', 'Ah.05g178060' => 'amhyb', 'Ah.07g204270' => 'amhyb', 'Ah.07g208480' => 'amhyb', 'Ah.09g237410' => 'amhyb', 'Ah.14g089460' => 'amhyb', 'AL1G41790' => 'aly', 'AL1G49050' => 'aly', 'AL1G53810' => 'aly', 'AL1G61400' => 'aly', 'AL4G18580' => 'aly', 'AL5G12510' => 'aly', 'AL5G12540' => 'aly', 'AL6G43230' => 'aly', 'AL7G10370' => 'aly', 'AL7G19250' => 'aly', 'AL8G12240' => 'aly', 'AL8G18540' => 'aly', 'Aqoxy1G02409' => 'aox', 'Aqoxy2G03993' => 'aox', 'Aqoxy3G03357' => 'aox', 'Aqoxy4G00785' => 'aox', 'Aqoxy5G02598' => 'aox', 'Aqoxy6G00132' => 'aox', 'Aqoxy7G01776' => 'aox', 'Aqoxy7G02316' => 'aox', 'Aqoxy7G03973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.12AFKW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B8730' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27IQR1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3F75VG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3RE0GA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41TCQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.527VTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FIR39' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5W8UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DA38EV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ63HS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H1I32C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HC27T5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4M8AP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7N3CZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9UVDZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LS1NQA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT1D4B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SKC4TM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCFV76' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF9Q1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQWD9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1ZM88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WE07RT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YCK7VH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJE6Q6' => 'arhy', 'AT1G28240' => 'ath', 'AT1G34550' => 'ath', 'AT1G53040' => 'ath', 'AT2G02910' => 'ath', 'AT4G09630' => 'ath', 'AT4G38500' => 'ath', 'AT5G42660' => 'ath', 'AT5G46220' => 'ath', 'ATR0152G026' => 'atr', 'ATR0564G343' => 'atr', 'ATR0706G151' => 'atr', 'ATR0733G207' => 'atr', 'ATR0751G234' => 'atr', 'ATR0807G048' => 'atr', 'ATR1091G084' => 'atr', 'Atru.chr10.1229' => 'acertr', 'Atru.chr10.1230' => 'acertr', 'Atru.chr10.1874' => 'acertr', 'Atru.chr11.1808' => 'acertr', 'Atru.chr13.1795' => 'acertr', 'Atru.chr13.570' => 'acertr', 'Atru.chr2.2608' => 'acertr', 'Atru.chr2.2609' => 'acertr', 'Atru.chr5.3428' => 'acertr', 'Atru.chr8.1171' => 'acertr', 'AUR62004651' => 'cqu', 'AUR62008675' => 'cqu', 'AUR62010014' => 'cqu', 'AUR62013004' => 'cqu', 'AUR62014825' => 'cqu', 'AUR62015015' => 'cqu', 'AUR62015151' => 'cqu', 'AUR62017020' => 'cqu', 'AUR62019422' => 'cqu', 'AUR62023570' => 'cqu', 'AUR62025571' => 'cqu', 'AUR62029098' => 'cqu', 'AUR62033863' => 'cqu', 'AUR62034296' => 'cqu', 'AUR62040075' => 'cqu', 'BcaB02g07334' => 'bca', 'BcaB02g10575' => 'bca', 'BcaB03g12119' => 'bca', 'BcaB03g12120' => 'bca', 'BcaB03g13945' => 'bca', 'BcaB04g17123' => 'bca', 'BcaB04g17867' => 'bca', 'BcaB04g19839' => 'bca', 'BcaB07g30317' => 'bca', 'BcaB07g32432' => 'bca', 'BcaB07g33362' => 'bca', 'BcaB08g36611' => 'bca', 'BcaC01g00028' => 'bca', 'BcaC01g01356' => 'bca', 'BcaC01g02034' => 'bca', 'BcaC01g06051' => 'bca', 'BcaC03g16839' => 'bca', 'BcaC03g17176' => 'bca', 'BcaC05g26829' => 'bca', 'BcaC06g31490' => 'bca', 'BcaC06g35344' => 'bca', 'BcaC06g36570' => 'bca', 'BcaC07g37537' => 'bca', 'BcaC08g43491' => 'bca', 'BcaC08g43773' => 'bca', 'BcaNung00234' => 'bca', 'BcaNung01982' => 'bca', 'BcaNung03707' => 'bca', 'BcaNung06454' => 'bca', 'BolC2t10762H' => 'bol', 'BolC2t11191H' => 'bol', 'BolC3t14322H' => 'bol', 'BolC3t19747H' => 'bol', 'BolC3t21425H' => 'bol', 'BolC4t27800H' => 'bol', 'BolC5t31423H' => 'bol', 'BolC6t35951H' => 'bol', 'BolC6t36282H' => 'bol', 'BolC7t40678H' => 'bol', 'BolC7t40679H' => 'bol', 'BolC7t42222H' => 'bol', 'BolC7t43492H' => 'bol', 'BolC7t46785H' => 'bol', 'BolC8t47853H' => 'bol', 'BolC9t56805H' => 'bol', 'BraA02t08000Z' => 'bra', 'BraA02t08341Z' => 'bra', 'BraA03t10936Z' => 'bra', 'BraA03t15657Z' => 'bra', 'BraA04t18100Z' => 'bra', 'BraA05t20523Z' => 'bra', 'BraA06t23353Z' => 'bra', 'BraA06t27473Z' => 'bra', 'BraA06t27769Z' => 'bra', 'BraA07t28928Z' => 'bra', 'BraA08t32236Z' => 'bra', 'BraA08t32841Z' => 'bra', 'BraA08t34524Z' => 'bra', 'BraA09t38742Z' => 'bra', 'BraA09t39295Z' => 'bra', 'C02p47180' => 'bna', 'C02p50990' => 'bna', 'C03p19360' => 'bna', 'C03p74950' => 'bna', 'C03p91000' => 'bna', 'C04p63260' => 'bna', 'C05p27050' => 'bna', 'C06p08750' => 'bna', 'C06p11490' => 'bna', 'C07p02820' => 'bna', 'C07p17180' => 'bna', 'C07p29440' => 'bna', 'C07p63730' => 'bna', 'C09p39260' => 'bna', 'CAN.G1164.34' => 'can', 'CAN.G1164.39' => 'can', 'CAN.G1530.3' => 'can', 'CAN.G162.61' => 'can', 'CAN.G176.6' => 'can', 'CAN.G289.49' => 'can', 'CAN.G370.21' => 'can', 'CAN.G370.22' => 'can', 'CAN.G371.117' => 'can', 'CAN.G58.37' => 'can', 'CAN.G588.98' => 'can', 'CANSAT21G2266' => 'cansat', 'CANSAT25G2799' => 'cansat', 'CANSAT35G0862' => 'cansat', 'CANSAT35G1704' => 'cansat', 'CANSAT35G1760' => 'cansat', 'CANSAT56G3971' => 'cansat', 'CANSAT56G4116' => 'cansat', 'CANSAT80G1259' => 'cansat', 'CARHR027730' => 'chi', 'CARHR033880' => 'chi', 'CARHR043270' => 'chi', 'CARHR145330' => 'chi', 'CARHR145340' => 'chi', 'CARHR175570' => 'chi', 'CARHR181570' => 'chi', 'CARHR258470' => 'chi', 'CARHR260490' => 'chi', 'CARHR294220' => 'chi', 'Carub.0001s2668' => 'cru', 'Carub.0001s3257' => 'cru', 'Carub.0001s4220' => 'cru', 'Carub.0005s0179' => 'cru', 'Carub.0006s2807' => 'cru', 'Carub.0007s0039' => 'cru', 'Carub.0008s0169' => 'cru', 'Carub.0008s0636' => 'cru', 'Ca_00338_v3' => 'car', 'Ca_00542_v3' => 'car', 'Ca_01844_v3' => 'car', 'Ca_10611_v3' => 'car', 'Ca_13326_v3' => 'car', 'Ca_17944_v3' => 'car', 'Ca_18546_v3' => 'car', 'Ca_24219_v3' => 'car', 'Ca_29972_v3' => 'car', 'CBR_g3681' => 'cbr', 'CBR_g40021' => 'cbr', 'Cc01_g08140' => 'ccan', 'Cc02_g13410' => 'ccan', 'Cc02_g37480' => 'ccan', 'Cc05_g12030' => 'ccan', 'Cc09_g03370' => 'ccan', 'Cc09_g10300' => 'ccan', 'Cc10_g03530' => 'ccan', 'Cc10_g11380' => 'ccan', 'CDE01G0176' => 'cde', 'CDE02G0675' => 'cde', 'CDE02G0942' => 'cde', 'CDE02G1153' => 'cde', 'CDE02G4177' => 'cde', 'CDE04G2117' => 'cde', 'CDE04G2736' => 'cde', 'CDE08G1161' => 'cde', 'CDE09G1238' => 'cde', 'Cfa000467' => 'cfa', 'Cfa000947' => 'cfa', 'Cfa004969' => 'cfa', 'Cfa005284' => 'cfa', 'Cfa008993' => 'cfa', 'Cfa018187' => 'cfa', 'Cfa018454' => 'cfa', 'Cfa020585' => 'cfa', 'Ciclev10000424m.g' => 'ccl', 'Ciclev10003605m.g' => 'ccl', 'Ciclev10007828m.g' => 'ccl', 'Ciclev10014620m.g' => 'ccl', 'Ciclev10015169m.g' => 'ccl', 'Ciclev10018291m.g' => 'ccl', 'Ciclev10028256m.g' => 'ccl', 'Ciclev10033822m.g' => 'ccl', 'CiPaw.05G060300' => 'cil', 'CiPaw.05G085000' => 'cil', 'CiPaw.06G083700' => 'cil', 'CiPaw.06G120300' => 'cil', 'CiPaw.09G060500' => 'cil', 'CiPaw.09G123800' => 'cil', 'CiPaw.11G169700' => 'cil', 'CiPaw.12G118300' => 'cil', 'CiPaw.15G071000' => 'cil', 'CiPaw.15G081900' => 'cil', 'ClCG01G024610' => 'cla', 'ClCG03G006070' => 'cla', 'ClCG05G019250' => 'cla', 'ClCG09G009500' => 'cla', 'ClCG11G008200' => 'cla', 'ClCG11G018080' => 'cla', 'COL.COLO4_17373' => 'col', 'COL.COLO4_22994' => 'col', 'COL.COLO4_26389' => 'col', 'COL.COLO4_27170' => 'col', 'COL.COLO4_31074' => 'col', 'COL.COLO4_31465' => 'col', 'COL.COLO4_36438' => 'col', 'COL.COLO4_36439' => 'col', 'Cpa.g.c38781' => 'cpa', 'Cpa.g.sc128.12' => 'cpa', 'Cpa.g.sc166.7' => 'cpa', 'Cpa.g.sc166.8' => 'cpa', 'Cpa.g.sc20.111' => 'cpa', 'Cpa.g.sc27.31' => 'cpa', 'Cpa.g.sc64.36' => 'cpa', 'Cpa.g.sc64.37' => 'cpa', 'Cpa.g.sc66.49' => 'cpa', 'Cpa.g.sc80.64' => 'cpa', 'CsaV3_1G012320' => 'csa', 'CsaV3_2G008480' => 'csa', 'CsaV3_2G033450' => 'csa', 'CsaV3_3G044830' => 'csa', 'CsaV3_4G033710' => 'csa', 'CsaV3_6G051730' => 'csa', 'CsaV3_7G025350' => 'csa', 'CSS0001067' => 'camsi', 'CSS0005996' => 'camsi', 'CSS0006590' => 'camsi', 'CSS0009673' => 'camsi', 'CSS0010201' => 'camsi', 'CSS0010549' => 'camsi', 'CSS0011364' => 'camsi', 'CSS0014473' => 'camsi', 'CSS0014961' => 'camsi', 'CSS0020191' => 'camsi', 'CSS0021165' => 'camsi', 'CSS0022306' => 'camsi', 'CSS0030591' => 'camsi', 'CSS0030696' => 'camsi', 'CSS0032653' => 'camsi', 'CSS0037487' => 'camsi', 'CSS0041102' => 'camsi', 'CSS0041261' => 'camsi', 'CSS0046246' => 'camsi', 'CSS0049256' => 'camsi', 'DCAR_004075' => 'dca', 'DCAR_011538' => 'dca', 'DCAR_019553' => 'dca', 'DCAR_020952' => 'dca', 'DCAR_021739' => 'dca', 'DCAR_027407' => 'dca', 'DCAR_027913' => 'dca', 'DCAR_028066' => 'dca', 'Dinv05899' => 'din', 'Dinv07563' => 'din', 'Dinv08010' => 'din', 'Dinv14125' => 'din', 'Dinv20172' => 'din', 'Dinv30743' => 'din', 'Dinv31229' => 'din', 'Dinv34162' => 'din', 'Dinv36028' => 'din', 'Dinv39368' => 'din', 'Dinv40565' => 'din', 'Dinv41706' => 'din', 'Duzib052G0089' => 'dzi', 'Duzib116G0641' => 'dzi', 'Duzib132G0069' => 'dzi', 'Duzib132G1219' => 'dzi', 'Duzib147G0278' => 'dzi', 'Duzib160G0480' => 'dzi', 'Duzib170G0661' => 'dzi', 'Duzib177G0591' => 'dzi', 'Duzib187G1353' => 'dzi', 'Duzib192G0858' => 'dzi', 'Duzib192G0883' => 'dzi', 'Duzib213G0506' => 'dzi', 'Duzib235G0289' => 'dzi', 'Duzib251G0422' => 'dzi', 'ECA232G3898' => 'eca', 'ECA233G5950' => 'eca', 'ECA234G1699' => 'eca', 'ECA234G2421' => 'eca', 'ECA236G0426' => 'eca', 'ECA236G4331' => 'eca', 'ECA248G2573' => 'eca', 'EL10Ac1g00077' => 'bvu', 'EL10Ac1g01746' => 'bvu', 'EL10Ac2g03464' => 'bvu', 'EL10Ac4g08176' => 'bvu', 'EL10Ac7g17521' => 'bvu', 'EL10Ac8g20386' => 'bvu', 'EL10Ac9g21343' => 'bvu', 'EL10Ac9g22688' => 'bvu', 'Eucgr.B03434' => 'egr', 'Eucgr.D00618' => 'egr', 'Eucgr.E02395' => 'egr', 'Eucgr.F01129' => 'egr', 'Eucgr.F02622' => 'egr', 'Eucgr.F04207' => 'egr', 'FAN01G0570' => 'fan', 'FAN03G3351' => 'fan', 'FAN06G3702' => 'fan', 'FAN07G2149' => 'fan', 'FAN10G3758' => 'fan', 'FAN11G1170' => 'fan', 'FAN11G2050' => 'fan', 'FAN11G2724' => 'fan', 'FAN12G1700' => 'fan', 'FAN12G2028' => 'fan', 'FAN15G1160' => 'fan', 'FAN15G3063' => 'fan', 'FAN16G2540' => 'fan', 'FAN16G3077' => 'fan', 'FAN16G3624' => 'fan', 'FAN17G0221' => 'fan', 'FAN20G2492' => 'fan', 'FAN20G2905' => 'fan', 'FAN21G0548' => 'fan', 'FAN21G1300' => 'fan', 'FAN22G0077' => 'fan', 'FAN22G1315' => 'fan', 'FAN24G1280' => 'fan', 'FAN24G1445' => 'fan', 'FAN24G3527' => 'fan', 'FAN25G0464' => 'fan', 'FAN25G2885' => 'fan', 'FAN25G3270' => 'fan', 'FAN27G1101' => 'fan', 'FAN27G2846' => 'fan', 'FAN27G3524' => 'fan', 'FvH4_2g11770' => 'fve', 'FvH4_2g15630' => 'fve', 'FvH4_3g05570' => 'fve', 'FvH4_3g09110' => 'fve', 'FvH4_3g19940' => 'fve', 'FvH4_4g04821' => 'fve', 'FvH4_4g31480' => 'fve', 'FvH4_7g01740' => 'fve', 'Glyma.05G130400' => 'gma', 'Glyma.05G156400' => 'gma', 'Glyma.07G197000' => 'gma', 'Glyma.08G085151' => 'gma', 'Glyma.08G114500' => 'gma', 'Glyma.08G300400' => 'gma', 'Glyma.10G215800' => 'gma', 'Glyma.12G224400' => 'gma', 'Glyma.13G179300' => 'gma', 'Glyma.13G218151' => 'gma', 'Glyma.13G238800' => 'gma', 'Glyma.13G276900' => 'gma', 'Glyma.14G078200' => 'gma', 'Glyma.15G074500' => 'gma', 'Glyma.15G094100' => 'gma', 'Glyma.17G247200' => 'gma', 'Glyma.18G120100' => 'gma', 'Glyma.20G176000' => 'gma', 'Gohir.A01G063600' => 'ghi', 'Gohir.A01G170301' => 'ghi', 'Gohir.A02G060500' => 'ghi', 'Gohir.A05G133850' => 'ghi', 'Gohir.A05G161400' => 'ghi', 'Gohir.A06G012900' => 'ghi', 'Gohir.A06G035901' => 'ghi', 'Gohir.A06G127100' => 'ghi', 'Gohir.A06G210500' => 'ghi', 'Gohir.A08G008650' => 'ghi', 'Gohir.A09G072700' => 'ghi', 'Gohir.A09G088301' => 'ghi', 'Gohir.A10G040600' => 'ghi', 'Gohir.A12G036300' => 'ghi', 'Gohir.A12G143350' => 'ghi', 'Gohir.A12G165500' => 'ghi', 'Gohir.A13G145700' => 'ghi', 'Gohir.D01G050000' => 'ghi', 'Gohir.D01G051366' => 'ghi', 'Gohir.D01G161350' => 'ghi', 'Gohir.D02G065900' => 'ghi', 'Gohir.D05G164200' => 'ghi', 'Gohir.D05G355500' => 'ghi', 'Gohir.D06G010400' => 'ghi', 'Gohir.D06G111250' => 'ghi', 'Gohir.D06G132000' => 'ghi', 'Gohir.D06G210500' => 'ghi', 'Gohir.D07G165675' => 'ghi', 'Gohir.D08G062240' => 'ghi', 'Gohir.D08G086101' => 'ghi', 'Gohir.D08G138060' => 'ghi', 'Gohir.D09G072300' => 'ghi', 'Gohir.D10G041400' => 'ghi', 'Gohir.D11G191020' => 'ghi', 'Gohir.D11G212066' => 'ghi', 'Gohir.D12G036300' => 'ghi', 'Gohir.D12G168600' => 'ghi', 'Gohir.D13G150600' => 'ghi', 'Gorai.001G057300' => 'gra', 'Gorai.002G069900' => 'gra', 'Gorai.002G200000' => 'gra', 'Gorai.003G067600' => 'gra', 'Gorai.005G074800' => 'gra', 'Gorai.006G087300' => 'gra', 'Gorai.008G037500' => 'gra', 'Gorai.008G181400' => 'gra', 'Gorai.009G169400' => 'gra', 'Gorai.009G387900' => 'gra', 'Gorai.010G013300' => 'gra', 'Gorai.010G153800' => 'gra', 'Gorai.010G255800' => 'gra', 'Gorai.011G043700' => 'gra', 'Gorai.011G198900' => 'gra', 'Gorai.013G168400' => 'gra', 'GSVIVG01005212001' => 'vvi', 'GSVIVG01006163001' => 'vvi', 'GSVIVG01009625001' => 'vvi', 'GSVIVG01014338001' => 'vvi', 'GSVIVG01020005001' => 'vvi', 'GSVIVG01021450001' => 'vvi', 'GSVIVG01023975001' => 'vvi', 'GSVIVG01034490001' => 'vvi', 'HanXRQChr04g0112071' => 'han', 'HanXRQChr05g0131151' => 'han', 'HanXRQChr09g0262371' => 'han', 'HanXRQChr09g0268401' => 'han', 'HanXRQChr10g0279241' => 'han', 'HanXRQChr10g0297961' => 'han', 'HanXRQChr11g0326231' => 'han', 'HanXRQChr11g0328471' => 'han', 'HanXRQChr16g0507941' => 'han', 'HanXRQChr17g0560211' => 'han', 'Haze_02108' => 'cav', 'Haze_02428' => 'cav', 'Haze_05593' => 'cav', 'Haze_06448' => 'cav', 'Haze_09427' => 'cav', 'Haze_12022' => 'cav', 'Haze_17612' => 'cav', 'Haze_17928' => 'cav', 'Hma1.2p1_0032F.1_g019250' => 'hma', 'Hma1.2p1_0163F.1_g072690' => 'hma', 'Hma1.2p1_0265F.1_g106710' => 'hma', 'Hma1.2p1_0286F.1_g113970' => 'hma', 'Hma1.2p1_0363F.1_g136640' => 'hma', 'Hma1.2p1_0584F.1_g183470' => 'hma', 'Hma1.2p1_0885F.1_g232570' => 'hma', 'HPP92_006022' => 'vpl', 'HPP92_007320' => 'vpl', 'HPP92_011521' => 'vpl', 'HPP92_019387' => 'vpl', 'HPP92_024038' => 'vpl', 'Hund05891' => 'sun', 'Hund06450' => 'sun', 'Hund12053' => 'sun', 'Hund16800' => 'sun', 'Hund21222' => 'sun', 'Hund22896' => 'sun', 'Hund23746' => 'sun', 'Hund27083' => 'sun', 'Lalb_Chr02g0141831' => 'lal', 'Lalb_Chr02g0141841' => 'lal', 'Lalb_Chr05g0220411' => 'lal', 'Lalb_Chr06g0162081' => 'lal', 'Lalb_Chr09g0327651' => 'lal', 'Lalb_Chr13g0295051' => 'lal', 'Lalb_Chr15g0086801' => 'lal', 'Lalb_Chr16g0383781' => 'lal', 'Lalb_Chr16g0383791' => 'lal', 'Lalb_Chr18g0055441' => 'lal', 'Lalb_Chr18g0059611' => 'lal', 'Lalb_Chr20g0109661' => 'lal', 'Lalb_Chr20g0109831' => 'lal', 'Lalb_Chr20g0121871' => 'lal', 'Lalb_Chr22g0355361' => 'lal', 'Lalb_Chr25g0286371' => 'lal', 'Lj1A1187G43' => 'lonja', 'Lj1A1205T50' => 'lonja', 'Lj1A800G33' => 'lonja', 'Lj1C1187T7' => 'lonja', 'Lj1C843T11' => 'lonja', 'Lj1g0010940' => 'lja', 'Lj2A288T69' => 'lonja', 'Lj3g0024276' => 'lja', 'Lj4A47T76' => 'lonja', 'Lj4g0005805' => 'lja', 'Lj4g0006097' => 'lja', 'Lj4g0008528' => 'lja', 'Lj4g0024907' => 'lja', 'Lj5g0012472' => 'lja', 'Lj5g0018648' => 'lja', 'Lj6C789G1' => 'lonja', 'Lj6g0004000' => 'lja', 'Lj7A292G67' => 'lonja', 'Lj7A292T64' => 'lonja', 'Lj9A400T58' => 'lonja', 'Lsat_1_v5_gn_1_126181' => 'lsa', 'Lsat_1_v5_gn_4_123041' => 'lsa', 'Lsat_1_v5_gn_4_133620' => 'lsa', 'Lsat_1_v5_gn_4_53221' => 'lsa', 'Lsat_1_v5_gn_4_71961' => 'lsa', 'Lsat_1_v5_gn_7_105241' => 'lsa', 'Lsat_1_v5_gn_7_21361' => 'lsa', 'Lsat_1_v5_gn_7_28860' => 'lsa', 'Lsat_1_v5_gn_7_31260' => 'lsa', 'Lsat_1_v5_gn_8_52801' => 'lsa', 'Manes.02G191400' => 'mes', 'Manes.03G110100' => 'mes', 'Manes.04G071100' => 'mes', 'Manes.05G100500' => 'mes', 'Manes.05G164700' => 'mes', 'Manes.15G087000' => 'mes', 'Manes.15G121500' => 'mes', 'Manes.16G028300' => 'mes', 'Manes.17G046100' => 'mes', 'Manes.17G069800' => 'mes', 'Manes.18G100500' => 'mes', 'Mapoly0002s0109' => 'mpo', 'Mapoly0024s0007' => 'mpo', 'Mapoly0089s0032' => 'mpo', 'MBI04_g42241_MAGBIO' => 'mbi', 'MBI05_g11988_MAGBIO' => 'mbi', 'MBI05_g35452_MAGBIO' => 'mbi', 'MBI07_g30179_MAGBIO' => 'mbi', 'MBI07_g35859_MAGBIO' => 'mbi', 'MBI07_g35860_MAGBIO' => 'mbi', 'MBI07_g37166_MAGBIO' => 'mbi', 'MBI08_g18172_MAGBIO' => 'mbi', 'MBI09_g08441_MAGBIO' => 'mbi', 'MBI13_g01676_MAGBIO' => 'mbi', 'MBI14_g42955_MAGBIO' => 'mbi', 'MBI16_g13161_MAGBIO' => 'mbi', 'MBI17_g27204_MAGBIO' => 'mbi', 'MBI19_g21595_MAGBIO' => 'mbi', 'MD00G1148400' => 'mdo', 'MD02G1301200' => 'mdo', 'MD03G1227800' => 'mdo', 'MD05G1041100' => 'mdo', 'MD05G1124800' => 'mdo', 'MD05G1284000' => 'mdo', 'MD05G1338800' => 'mdo', 'MD05G1338900' => 'mdo', 'MD07G1022800' => 'mdo', 'MD10G1047500' => 'mdo', 'MD10G1127500' => 'mdo', 'MD10G1262300' => 'mdo', 'MD10G1293800' => 'mdo', 'MD16G1074300' => 'mdo', 'Medtr1g021670' => 'mtr', 'Medtr1g096320' => 'mtr', 'Medtr2g013690' => 'mtr', 'Medtr2g019450' => 'mtr', 'Medtr2g085170' => 'mtr', 'Medtr4g088785' => 'mtr', 'Medtr8g055930' => 'mtr', 'Medtr8g085850' => 'mtr', 'MELO3C002605.2' => 'cme', 'MELO3C003891.2' => 'cme', 'MELO3C004012.2' => 'cme', 'MELO3C007134.2' => 'cme', 'MELO3C008118.2' => 'cme', 'MELO3C016700.2' => 'cme', 'MELO3C024127.2' => 'cme', 'MELO3C033361.2' => 'cme', 'MELO3C033362.2' => 'cme', 'Migut.C00430' => 'egut', 'Migut.C01246' => 'egut', 'Migut.E00101' => 'egut', 'Migut.H01486' => 'egut', 'Migut.H01939' => 'egut', 'Migut.K00360' => 'egut', 'Migut.M00910' => 'egut', 'Migut.M01139' => 'egut', 'Migut.N02677' => 'egut', 'MSTRG.13252' => 'ama', 'MSTRG.14701' => 'ama', 'MSTRG.1521' => 'ama', 'MSTRG.15884' => 'ama', 'MSTRG.16242' => 'ama', 'MSTRG.22285' => 'ama', 'MSTRG.22444' => 'ama', 'MSTRG.2349' => 'ama', 'MSTRG.26308' => 'ama', 'MSTRG.28296' => 'ama', 'MSTRG.9895' => 'ama', 'Nitab4.5_0000110g0060' => 'nta', 'Nitab4.5_0000420g0130' => 'nta', 'Nitab4.5_0000422g0030' => 'nta', 'Nitab4.5_0000560g0180' => 'nta', 'Nitab4.5_0000703g0100' => 'nta', 'Nitab4.5_0000786g0200' => 'nta', 'Nitab4.5_0001336g0020' => 'nta', 'Nitab4.5_0001796g0030' => 'nta', 'Nitab4.5_0003348g0060' => 'nta', 'Nitab4.5_0003698g0040' => 'nta', 'Nitab4.5_0003942g0090' => 'nta', 'Nitab4.5_0004775g0070' => 'nta', 'Nitab4.5_0004864g0030' => 'nta', 'Nitab4.5_0005615g0020' => 'nta', 'Nitab4.5_0009288g0030' => 'nta', 'Nitab4.5_0009341g0010' => 'nta', 'Nitab4.5_0009535g0010' => 'nta', 'Nn1g03995' => 'nnu', 'Nn1g04100' => 'nnu', 'Nn1g06530' => 'nnu', 'Nn3g16404' => 'nnu', 'Nn3g17212' => 'nnu', 'Nn3g20776' => 'nnu', 'Nn3g21923' => 'nnu', 'Nn5g27737' => 'nnu', 'Nn5g29461' => 'nnu', 'Nn7g38355' => 'nnu', 'Nn8g39873' => 'nnu', 'Oeu000548.2' => 'oeu', 'Oeu004672.1' => 'oeu', 'Oeu015605.2' => 'oeu', 'Oeu016092.1' => 'oeu', 'Oeu017879.3' => 'oeu', 'Oeu024910.1' => 'oeu', 'Oeu028965.1' => 'oeu', 'Oeu031269.1' => 'oeu', 'Oeu031270.1' => 'oeu', 'Oeu032535.1' => 'oeu', 'Oeu034151.1' => 'oeu', 'Oeu034152.1' => 'oeu', 'Oeu034588.2' => 'oeu', 'Oeu050846.1' => 'oeu', 'Oeu050849.2' => 'oeu', 'Oeu051063.2' => 'oeu', 'Oeu052368.1' => 'oeu', 'Oeu052370.1' => 'oeu', 'Os01g0210400' => 'osa', 'Os01g0304300' => 'osa', 'Os01g0749100' => 'osa', 'Os02g0745800' => 'osa', 'Os03g0769050' => 'osa', 'Os05g0531500' => 'osa', 'Os06g0724300' => 'osa', 'Os11g0198100' => 'osa', 'Peaxi162Scf00069g01425' => 'pax', 'Peaxi162Scf00280g00811' => 'pax', 'Peaxi162Scf00310g00615' => 'pax', 'Peaxi162Scf00362g00542' => 'pax', 'Peaxi162Scf00461g00310' => 'pax', 'Peaxi162Scf00530g00118' => 'pax', 'Peaxi162Scf00541g00057' => 'pax', 'Peaxi162Scf00661g00017' => 'pax', 'Peaxi162Scf00926g00027' => 'pax', 'Peaxi162Scf01064g00263' => 'pax', 'Peaxi162Scf01211g00135' => 'pax', 'PGR004G2336' => 'pgr', 'PGR042G0327' => 'pgr', 'PGR042G1957' => 'pgr', 'PGR042G2003' => 'pgr', 'PGR042G3929' => 'pgr', 'PGR083G1137' => 'pgr', 'PGR083G1364' => 'pgr', 'PGSC0003DMG400003381' => 'stu', 'PGSC0003DMG400003417' => 'stu', 'PGSC0003DMG400008981' => 'stu', 'PGSC0003DMG400012417' => 'stu', 'PGSC0003DMG400012823' => 'stu', 'PGSC0003DMG400016885' => 'stu', 'PGSC0003DMG400022812' => 'stu', 'PGSC0003DMG400029726' => 'stu', 'PGSC0003DMG401009243' => 'stu', 'PGSC0003DMG401031505' => 'stu', 'PGSC0003DMG402031505' => 'stu', 'Phvul.001G017600' => 'pvu', 'Phvul.002G193500' => 'pvu', 'Phvul.002G228900' => 'pvu', 'Phvul.002G236800' => 'pvu', 'Phvul.003G049500' => 'pvu', 'Phvul.005G072000' => 'pvu', 'Phvul.006G164800' => 'pvu', 'Phvul.006G185100' => 'pvu', 'Phvul.007G090000' => 'pvu', 'Potri.001G399800' => 'ptr', 'Potri.002G149900' => 'ptr', 'Potri.004G044100' => 'ptr', 'Potri.004G177600' => 'ptr', 'Potri.009G138000' => 'ptr', 'Potri.010G094000' => 'ptr', 'Potri.011G053000' => 'ptr', 'Potri.011G119300' => 'ptr', 'Potri.013G113700' => 'ptr', 'Potri.018G107800' => 'ptr', 'Potri.019G084100' => 'ptr', 'Pp3c14_23720' => 'ppa', 'Pp3c16_6340' => 'ppa', 'Pp3c23_13420' => 'ppa', 'Pp3c24_2740' => 'ppa', 'Pp3c25_860' => 'ppa', 'Pp3c8_21750' => 'ppa', 'Prupe.1G273000' => 'ppe', 'Prupe.1G273700' => 'ppe', 'Prupe.1G274100' => 'ppe', 'Prupe.2G023300' => 'ppe', 'Prupe.4G048000' => 'ppe', 'Prupe.4G080400' => 'ppe', 'Prupe.4G181200' => 'ppe', 'Prupe.8G056900' => 'ppe', 'Prupe.8G168700' => 'ppe', 'Psat1g189080' => 'psa', 'Psat1g204760' => 'psa', 'Psat4g175560' => 'psa', 'Psat4g177720' => 'psa', 'Psat5g244240' => 'psa', 'Psat6g010720' => 'psa', 'Psat6g187200' => 'psa', 'Psat7g072040' => 'psa', 'PSO017G3501' => 'pso', 'PSO063G2148' => 'pso', 'PSO063G5608' => 'pso', 'PSO210G6392' => 'pso', 'PSO541G2319' => 'pso', 'PSO541G2836' => 'pso', 'PSO541G4012' => 'pso', 'PSO541G6253' => 'pso', 'PSO675G0580' => 'pso', 'PSO675G0856' => 'pso', 'PSO675G5635' => 'pso', 'PSO675G9157' => 'pso', 'PSO832G1660' => 'pso', 'PSO832G1969' => 'pso', 'QL02p007186' => 'qlo', 'QL02p033904' => 'qlo', 'QL03p064391' => 'qlo', 'QL05p040593' => 'qlo', 'QL05p058242' => 'qlo', 'QL08p021825' => 'qlo', 'QL11p004981' => 'qlo', 'RcHm_v2.0_Chr1g0318301' => 'rch', 'RcHm_v2.0_Chr4g0418501' => 'rch', 'RcHm_v2.0_Chr4g0439971' => 'rch', 'RcHm_v2.0_Chr5g0008541' => 'rch', 'RcHm_v2.0_Chr5g0014101' => 'rch', 'RcHm_v2.0_Chr5g0014131' => 'rch', 'RcHm_v2.0_Chr5g0033621' => 'rch', 'RcHm_v2.0_Chr6g0272041' => 'rch', 'RcHm_v2.0_Chr6g0278831' => 'rch', 'Rhsim02G0130400' => 'rsi', 'Rhsim02G0171100' => 'rsi', 'Rhsim05G0053000' => 'rsi', 'Rhsim05G0053100' => 'rsi', 'Rhsim06G0096500' => 'rsi', 'Rhsim06G0096600' => 'rsi', 'Rhsim06G0199100' => 'rsi', 'Rhsim12G0062300' => 'rsi', 'Rhsim12G0062800' => 'rsi', 'Sabra02G0118600' => 'sbr', 'Sabra04G0027300' => 'sbr', 'Sabra04G0119500' => 'sbr', 'Sabra08G0112500' => 'sbr', 'Sabra11G0036800' => 'sbr', 'Sabra11G0103800' => 'sbr', 'Sabra13G0096300' => 'sbr', 'Sabra16G0262300' => 'sbr', 'Sabra18G0091700' => 'sbr', 'Sabra19G0095400' => 'sbr', 'SalBow6G3080' => 'sbo', 'SalBow7G1157' => 'sbo', 'SalBow7G2123' => 'sbo', 'SalBow7G2285' => 'sbo', 'SalBow7G3537' => 'sbo', 'SalBow8G2947' => 'sbo', 'SalBow8G4463' => 'sbo', 'SalBow8G5466' => 'sbo', 'Sc01g0001750' => 'sci', 'Sc02g0006640' => 'sci', 'Sc02g0006670' => 'sci', 'Sc04g0008220' => 'sci', 'Sc05g0006190' => 'sci', 'Sc08g0002760' => 'sci', 'Sc17g0006170' => 'sci', 'Sc22g0002050' => 'sci', 'Sc23g0001190' => 'sci', 'Sc24g0000980' => 'sci', 'Sed0006245' => 'sed', 'Sed0007543' => 'sed', 'Sed0009411' => 'sed', 'Sed0010765' => 'sed', 'Sed0012944' => 'sed', 'Sed0014682' => 'sed', 'Sed0016174' => 'sed', 'Sed0016796' => 'sed', 'Sed0020317' => 'sed', 'Sed0021467' => 'sed', 'SEGI_01316' => 'sgi', 'SEGI_03374' => 'sgi', 'SEGI_16265' => 'sgi', 'SEGI_18569' => 'sgi', 'SEGI_20351' => 'sgi', 'SEGI_26395' => 'sgi', 'SEGI_29469' => 'sgi', 'SEGI_34771' => 'sgi', 'SEGI_36769' => 'sgi', 'SEGI_37139' => 'sgi', 'SGA_v2.0_scaffold100G29687' => 'sas', 'SGA_v2.0_scaffold118G32472' => 'sas', 'SGA_v2.0_scaffold14G07051' => 'sas', 'SGA_v2.0_scaffold183G39845' => 'sas', 'SGA_v2.0_scaffold1G00174' => 'sas', 'SGA_v2.0_scaffold22G09714' => 'sas', 'SGA_v2.0_scaffold333G48992' => 'sas', 'SGA_v2.0_scaffold46G17491' => 'sas', 'SGA_v2.0_scaffold49G18294' => 'sas', 'SGA_v2.0_scaffold63G21658' => 'sas', 'SHI01741' => 'shi', 'SHI05771' => 'shi', 'SHI18077' => 'shi', 'SHI20525' => 'shi', 'SHI20527' => 'shi', 'SHI20528' => 'shi', 'SMO172G0185' => 'smo', 'SMO198G0020' => 'smo', 'SMO351G0006' => 'smo', 'SMO356G0118' => 'smo', 'SMO358G0296' => 'smo', 'SMO367G0079' => 'smo', 'SMO367G1277' => 'smo', 'Solyc01g014220.3' => 'sly', 'Solyc01g111770.2' => 'sly', 'Solyc02g078180.3' => 'sly', 'Solyc03g006430.3' => 'sly', 'Solyc03g006456.1' => 'sly', 'Solyc03g079860.2' => 'sly', 'Solyc04g079770.3' => 'sly', 'Solyc05g007430.4' => 'sly', 'Solyc07g063150.3' => 'sly', 'Solyc08g016620.3' => 'sly', 'Solyc09g057590.3' => 'sly', 'Solyc09g057600.1' => 'sly', 'Solyc10g009050.3' => 'sly', 'Solyc11g017420.2' => 'sly', 'Sopen01g053810' => 'spe', 'Sopen02g023040' => 'spe', 'Sopen03g002440' => 'spe', 'Sopen04g033350' => 'spe', 'Sopen05g003310' => 'spe', 'Sopen07g004050' => 'spe', 'Sopen07g031340' => 'spe', 'Sopen08g006990' => 'spe', 'Sopen10g004830' => 'spe', 'Sopen11g009370' => 'spe', 'Sp1g24450' => 'spa', 'Sp1g29670' => 'spa', 'Sp1g39600' => 'spa', 'Sp2g11080' => 'spa', 'Sp2g13970' => 'spa', 'Sp4g16130' => 'spa', 'Sp6g13080' => 'spa', 'Sp7g37270' => 'spa', 'TAR371G0065' => 'tar', 'TAR376G0340' => 'tar', 'TAR376G0435' => 'tar', 'TAR381G0002' => 'tar', 'TAR381G1236' => 'tar', 'TAR624G0055' => 'tar', 'TAR624G0324' => 'tar', 'TAR624G0696' => 'tar', 'TAR624G0906' => 'tar', 'TAR625G0107' => 'tar', 'TAR626G0015' => 'tar', 'TAR626G1356' => 'tar', 'TAR627G0888' => 'tar', 'TAR628G0399' => 'tar', 'TAR628G1327' => 'tar', 'TAR629G2831' => 'tar', 'TAR629G2874' => 'tar', 'TAR633G1432' => 'tar', 'TAR633G2771' => 'tar', 'THA.LOC104803394' => 'tha', 'THA.LOC104805153' => 'tha', 'THA.LOC104806784' => 'tha', 'THA.LOC104810473' => 'tha', 'THA.LOC104813100' => 'tha', 'THA.LOC104814215' => 'tha', 'THA.LOC104815554' => 'tha', 'THA.LOC104820544' => 'tha', 'THA.LOC104824754' => 'tha', 'THA.LOC104827717' => 'tha', 'Thecc.02G031400' => 'tca', 'Thecc.02G055900' => 'tca', 'Thecc.02G350800' => 'tca', 'Thecc.06G150900' => 'tca', 'Thecc.06G186600' => 'tca', 'Thecc.07G089600' => 'tca', 'Thecc.08G020400' => 'tca', 'Thecc.08G182100' => 'tca', 'Thhalv10000873m.g' => 'esa', 'Thhalv10004185m.g' => 'esa', 'Thhalv10006981m.g' => 'esa', 'Thhalv10007204m.g' => 'esa', 'Thhalv10011374m.g' => 'esa', 'Thhalv10013482m.g' => 'esa', 'Thhalv10017801m.g' => 'esa', 'Thhalv10024983m.g' => 'esa', 'TPR.G12072' => 'tpr', 'TPR.G15769' => 'tpr', 'TPR.G16504' => 'tpr', 'TPR.G16506' => 'tpr', 'TPR.G24345' => 'tpr', 'TPR.G26666' => 'tpr', 'TPR.G27320' => 'tpr', 'TPR.G31819' => 'tpr', 'TPR.G38879' => 'tpr', 'TPR.G39015' => 'tpr', 'TPR.G8819' => 'tpr', 'TWI09G0924' => 'twi', 'TWI12G0811' => 'twi', 'TWI12G1294' => 'twi', 'TWI31G0150' => 'twi', 'TWI36G1262' => 'twi', 'TWI38G1287' => 'twi', 'TWI38G1633' => 'twi', 'TWI38G1982' => 'twi', 'TWI39G0116' => 'twi', 'TWI60G1011' => 'twi', 'TWI63G0171' => 'twi', 'TWI73G0839' => 'twi', 'TWI79G1511' => 'twi', 'unitig_0.g915' => 'ugi', 'unitig_0.g916' => 'ugi', 'unitig_21.g20219' => 'ugi', 'unitig_21.g20416' => 'ugi', 'unitig_578.g16132' => 'ugi', 'unitig_578.g16718' => 'ugi', 'unitig_62.g23481' => 'ugi', 'unitig_744.g24535' => 'ugi', 'unitig_749.g13525' => 'ugi', 'vmacro01248' => 'vma', 'vmacro02290' => 'vma', 'vmacro10946' => 'vma', 'vmacro11865' => 'vma', 'vmacro12493' => 'vma', 'vmacro17322' => 'vma', 'vmacro21599' => 'vma', 'vmacro23041' => 'vma', 'VMungo0251G0004' => 'vmu', 'VMungo0251G2639' => 'vmu', 'VMungo0251G2967' => 'vmu', 'VMungo0540G0864' => 'vmu', 'VMungo0540G1569' => 'vmu', 'VMungo0647G0317' => 'vmu', 'VMungo0720G1373' => 'vmu', 'VMungo0720G1508' => 'vmu', 'VMungo1080G0485' => 'vmu', 'VMungo1215G3177' => 'vmu', 'Zm00001eb112600' => 'zma', 'Zm00001eb120220' => 'zma', 'Zm00001eb153240' => 'zma', 'Zm00001eb168880' => 'zma', 'Zm00001eb213920' => 'zma', 'Zm00001eb228280' => 'zma', 'Zm00001eb254580' => 'zma', 'Zm00001eb272180' => 'zma', 'Zm00001eb293190' => 'zma', 'Zm00001eb322930' => 'zma', 'Zm00001eb353360' => 'zma', 'Zm00001eb353390' => 'zma', 'Zm00001eb353430' => 'zma', 'Zm00001eb353440' => 'zma', 'Zm00001eb353780' => 'zma' ) $gf_id = 'HOM05D000499' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000499' ) $data_identifier = 'HOM05D000499' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 29, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 12, 'amhyb' => (int) 8, 'aly' => (int) 12, 'aox' => (int) 9, 'arhy' => (int) 26, 'ath' => (int) 8, 'atr' => (int) 7, 'acertr' => (int) 10, 'cqu' => (int) 15, 'bca' => (int) 29, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 11, 'cansat' => (int) 8, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 9, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 8, 'cpa' => (int) 10, 'csa' => (int) 7, 'camsi' => (int) 20, 'dca' => (int) 8, 'din' => (int) 12, 'dzi' => (int) 14, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 6, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 38, 'gra' => (int) 16, 'vvi' => (int) 8, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 5, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 11, 'lja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 11, 'mpo' => (int) 3, 'mbi' => (int) 14, 'mdo' => (int) 14, 'mtr' => (int) 8, 'cme' => (int) 9, 'egut' => (int) 9, 'ama' => (int) 11, 'nta' => (int) 17, 'nnu' => (int) 11, 'oeu' => (int) 18, 'osa' => (int) 8, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 6, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 9, 'rsi' => (int) 9, 'sbr' => (int) 10, 'sbo' => (int) 8, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 10, 'sas' => (int) 10, 'shi' => (int) 6, 'smo' => (int) 7, 'sly' => (int) 14, 'spe' => (int) 10, 'spa' => (int) 8, 'tar' => (int) 19, 'tha' => (int) 10, 'tca' => (int) 8, 'esa' => (int) 8, 'tpr' => (int) 11, 'twi' => (int) 13, 'ugi' => (int) 9, 'vma' => (int) 8, 'vmu' => (int) 10, 'zma' => (int) 15 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb353780' $species_info = array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ) $local_species = 'camsi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000499', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1066', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p29780' => 'bna', 'A02p33180' => 'bna', 'A03p16470' => 'bna', 'A03p66010' => 'bna', 'A04p25970' => 'bna', 'A06p01270' => 'bna', 'A06p46080' => 'bna', 'A07p11400' => 'bna', 'A08p01840' => 'bna', 'A08p08230' => 'bna', 'A08p25740' => 'bna', 'A09p32070' => 'bna', 'A09p37830' => 'bna', 'A09p42840' => 'bna', 'A09p42850' => 'bna', 'Aa31LG10G2060' => 'aar', 'Aa31LG2G7410' => 'aar', 'Aa31LG6G10200' => 'aar', 'Aa31LG6G16680' => 'aar', 'Aa31LG6G8470' => 'aar', 'Aa31LG9G12730' => 'aar', 'Aa31LG9G13680' => 'aar', 'Aa31LG9G14920' => 'aar', 'Aa31LG9G6650' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4977' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5467' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3254' => 'aag', 'Actinidia02578' => 'ach', 'Actinidia07693' => 'ach', 'Actinidia08413' => 'ach', 'Actinidia08414' => 'ach', 'Actinidia15289' => 'ach', 'Actinidia19871' => 'ach', 'Actinidia21475' => 'ach', 'Actinidia22576' => 'ach', 'Actinidia28327' => 'ach', 'Actinidia32491' => 'ach', 'Actinidia39463' => 'ach', 'Actinidia39571' => 'ach', 'Ah.01g013750' => 'amhyb', 'Ah.01g023210' => 'amhyb', 'Ah.04g164850' => 'amhyb', 'Ah.05g178060' => 'amhyb', 'Ah.07g204270' => 'amhyb', 'Ah.07g208480' => 'amhyb', 'Ah.09g237410' => 'amhyb', 'Ah.14g089460' => 'amhyb', 'AL1G41790' => 'aly', 'AL1G49050' => 'aly', 'AL1G53810' => 'aly', 'AL1G61400' => 'aly', 'AL4G18580' => 'aly', 'AL5G12510' => 'aly', 'AL5G12540' => 'aly', 'AL6G43230' => 'aly', 'AL7G10370' => 'aly', 'AL7G19250' => 'aly', 'AL8G12240' => 'aly', 'AL8G18540' => 'aly', 'Aqoxy1G02409' => 'aox', 'Aqoxy2G03993' => 'aox', 'Aqoxy3G03357' => 'aox', 'Aqoxy4G00785' => 'aox', 'Aqoxy5G02598' => 'aox', 'Aqoxy6G00132' => 'aox', 'Aqoxy7G01776' => 'aox', 'Aqoxy7G02316' => 'aox', 'Aqoxy7G03973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.12AFKW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B8730' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27IQR1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3F75VG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3RE0GA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41TCQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.527VTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FIR39' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5W8UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DA38EV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ63HS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H1I32C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HC27T5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4M8AP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7N3CZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9UVDZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LS1NQA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT1D4B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SKC4TM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCFV76' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF9Q1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQWD9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1ZM88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WE07RT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YCK7VH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJE6Q6' => 'arhy', 'AT1G28240' => 'ath', 'AT1G34550' => 'ath', 'AT1G53040' => 'ath', 'AT2G02910' => 'ath', 'AT4G09630' => 'ath', 'AT4G38500' => 'ath', 'AT5G42660' => 'ath', 'AT5G46220' => 'ath', 'ATR0152G026' => 'atr', 'ATR0564G343' => 'atr', 'ATR0706G151' => 'atr', 'ATR0733G207' => 'atr', 'ATR0751G234' => 'atr', 'ATR0807G048' => 'atr', 'ATR1091G084' => 'atr', 'Atru.chr10.1229' => 'acertr', 'Atru.chr10.1230' => 'acertr', 'Atru.chr10.1874' => 'acertr', 'Atru.chr11.1808' => 'acertr', 'Atru.chr13.1795' => 'acertr', 'Atru.chr13.570' => 'acertr', 'Atru.chr2.2608' => 'acertr', 'Atru.chr2.2609' => 'acertr', 'Atru.chr5.3428' => 'acertr', 'Atru.chr8.1171' => 'acertr', 'AUR62004651' => 'cqu', 'AUR62008675' => 'cqu', 'AUR62010014' => 'cqu', 'AUR62013004' => 'cqu', 'AUR62014825' => 'cqu', 'AUR62015015' => 'cqu', 'AUR62015151' => 'cqu', 'AUR62017020' => 'cqu', 'AUR62019422' => 'cqu', 'AUR62023570' => 'cqu', 'AUR62025571' => 'cqu', 'AUR62029098' => 'cqu', 'AUR62033863' => 'cqu', 'AUR62034296' => 'cqu', 'AUR62040075' => 'cqu', 'BcaB02g07334' => 'bca', 'BcaB02g10575' => 'bca', 'BcaB03g12119' => 'bca', 'BcaB03g12120' => 'bca', 'BcaB03g13945' => 'bca', 'BcaB04g17123' => 'bca', 'BcaB04g17867' => 'bca', 'BcaB04g19839' => 'bca', 'BcaB07g30317' => 'bca', 'BcaB07g32432' => 'bca', 'BcaB07g33362' => 'bca', 'BcaB08g36611' => 'bca', 'BcaC01g00028' => 'bca', 'BcaC01g01356' => 'bca', 'BcaC01g02034' => 'bca', 'BcaC01g06051' => 'bca', 'BcaC03g16839' => 'bca', 'BcaC03g17176' => 'bca', 'BcaC05g26829' => 'bca', 'BcaC06g31490' => 'bca', 'BcaC06g35344' => 'bca', 'BcaC06g36570' => 'bca', 'BcaC07g37537' => 'bca', 'BcaC08g43491' => 'bca', 'BcaC08g43773' => 'bca', 'BcaNung00234' => 'bca', 'BcaNung01982' => 'bca', 'BcaNung03707' => 'bca', 'BcaNung06454' => 'bca', 'BolC2t10762H' => 'bol', 'BolC2t11191H' => 'bol', 'BolC3t14322H' => 'bol', 'BolC3t19747H' => 'bol', 'BolC3t21425H' => 'bol', 'BolC4t27800H' => 'bol', 'BolC5t31423H' => 'bol', 'BolC6t35951H' => 'bol', 'BolC6t36282H' => 'bol', 'BolC7t40678H' => 'bol', 'BolC7t40679H' => 'bol', 'BolC7t42222H' => 'bol', 'BolC7t43492H' => 'bol', 'BolC7t46785H' => 'bol', 'BolC8t47853H' => 'bol', 'BolC9t56805H' => 'bol', 'BraA02t08000Z' => 'bra', 'BraA02t08341Z' => 'bra', 'BraA03t10936Z' => 'bra', 'BraA03t15657Z' => 'bra', 'BraA04t18100Z' => 'bra', 'BraA05t20523Z' => 'bra', 'BraA06t23353Z' => 'bra', 'BraA06t27473Z' => 'bra', 'BraA06t27769Z' => 'bra', 'BraA07t28928Z' => 'bra', 'BraA08t32236Z' => 'bra', 'BraA08t32841Z' => 'bra', 'BraA08t34524Z' => 'bra', 'BraA09t38742Z' => 'bra', 'BraA09t39295Z' => 'bra', 'C02p47180' => 'bna', 'C02p50990' => 'bna', 'C03p19360' => 'bna', 'C03p74950' => 'bna', 'C03p91000' => 'bna', 'C04p63260' => 'bna', 'C05p27050' => 'bna', 'C06p08750' => 'bna', 'C06p11490' => 'bna', 'C07p02820' => 'bna', 'C07p17180' => 'bna', 'C07p29440' => 'bna', 'C07p63730' => 'bna', 'C09p39260' => 'bna', 'CAN.G1164.34' => 'can', 'CAN.G1164.39' => 'can', 'CAN.G1530.3' => 'can', 'CAN.G162.61' => 'can', 'CAN.G176.6' => 'can', 'CAN.G289.49' => 'can', 'CAN.G370.21' => 'can', 'CAN.G370.22' => 'can', 'CAN.G371.117' => 'can', 'CAN.G58.37' => 'can', 'CAN.G588.98' => 'can', 'CANSAT21G2266' => 'cansat', 'CANSAT25G2799' => 'cansat', 'CANSAT35G0862' => 'cansat', 'CANSAT35G1704' => 'cansat', 'CANSAT35G1760' => 'cansat', 'CANSAT56G3971' => 'cansat', 'CANSAT56G4116' => 'cansat', 'CANSAT80G1259' => 'cansat', 'CARHR027730' => 'chi', 'CARHR033880' => 'chi', 'CARHR043270' => 'chi', 'CARHR145330' => 'chi', 'CARHR145340' => 'chi', 'CARHR175570' => 'chi', 'CARHR181570' => 'chi', 'CARHR258470' => 'chi', 'CARHR260490' => 'chi', 'CARHR294220' => 'chi', 'Carub.0001s2668' => 'cru', 'Carub.0001s3257' => 'cru', 'Carub.0001s4220' => 'cru', 'Carub.0005s0179' => 'cru', 'Carub.0006s2807' => 'cru', 'Carub.0007s0039' => 'cru', 'Carub.0008s0169' => 'cru', 'Carub.0008s0636' => 'cru', 'Ca_00338_v3' => 'car', 'Ca_00542_v3' => 'car', 'Ca_01844_v3' => 'car', 'Ca_10611_v3' => 'car', 'Ca_13326_v3' => 'car', 'Ca_17944_v3' => 'car', 'Ca_18546_v3' => 'car', 'Ca_24219_v3' => 'car', 'Ca_29972_v3' => 'car', 'CBR_g3681' => 'cbr', 'CBR_g40021' => 'cbr', 'Cc01_g08140' => 'ccan', 'Cc02_g13410' => 'ccan', 'Cc02_g37480' => 'ccan', 'Cc05_g12030' => 'ccan', 'Cc09_g03370' => 'ccan', 'Cc09_g10300' => 'ccan', 'Cc10_g03530' => 'ccan', 'Cc10_g11380' => 'ccan', 'CDE01G0176' => 'cde', 'CDE02G0675' => 'cde', 'CDE02G0942' => 'cde', 'CDE02G1153' => 'cde', 'CDE02G4177' => 'cde', 'CDE04G2117' => 'cde', 'CDE04G2736' => 'cde', 'CDE08G1161' => 'cde', 'CDE09G1238' => 'cde', 'Cfa000467' => 'cfa', 'Cfa000947' => 'cfa', 'Cfa004969' => 'cfa', 'Cfa005284' => 'cfa', 'Cfa008993' => 'cfa', 'Cfa018187' => 'cfa', 'Cfa018454' => 'cfa', 'Cfa020585' => 'cfa', 'Ciclev10000424m.g' => 'ccl', 'Ciclev10003605m.g' => 'ccl', 'Ciclev10007828m.g' => 'ccl', 'Ciclev10014620m.g' => 'ccl', 'Ciclev10015169m.g' => 'ccl', 'Ciclev10018291m.g' => 'ccl', 'Ciclev10028256m.g' => 'ccl', 'Ciclev10033822m.g' => 'ccl', 'CiPaw.05G060300' => 'cil', 'CiPaw.05G085000' => 'cil', 'CiPaw.06G083700' => 'cil', 'CiPaw.06G120300' => 'cil', 'CiPaw.09G060500' => 'cil', 'CiPaw.09G123800' => 'cil', 'CiPaw.11G169700' => 'cil', 'CiPaw.12G118300' => 'cil', 'CiPaw.15G071000' => 'cil', 'CiPaw.15G081900' => 'cil', 'ClCG01G024610' => 'cla', 'ClCG03G006070' => 'cla', 'ClCG05G019250' => 'cla', 'ClCG09G009500' => 'cla', 'ClCG11G008200' => 'cla', 'ClCG11G018080' => 'cla', 'COL.COLO4_17373' => 'col', 'COL.COLO4_22994' => 'col', 'COL.COLO4_26389' => 'col', 'COL.COLO4_27170' => 'col', 'COL.COLO4_31074' => 'col', 'COL.COLO4_31465' => 'col', 'COL.COLO4_36438' => 'col', 'COL.COLO4_36439' => 'col', 'Cpa.g.c38781' => 'cpa', 'Cpa.g.sc128.12' => 'cpa', 'Cpa.g.sc166.7' => 'cpa', 'Cpa.g.sc166.8' => 'cpa', 'Cpa.g.sc20.111' => 'cpa', 'Cpa.g.sc27.31' => 'cpa', 'Cpa.g.sc64.36' => 'cpa', 'Cpa.g.sc64.37' => 'cpa', 'Cpa.g.sc66.49' => 'cpa', 'Cpa.g.sc80.64' => 'cpa', 'CsaV3_1G012320' => 'csa', 'CsaV3_2G008480' => 'csa', 'CsaV3_2G033450' => 'csa', 'CsaV3_3G044830' => 'csa', 'CsaV3_4G033710' => 'csa', 'CsaV3_6G051730' => 'csa', 'CsaV3_7G025350' => 'csa', 'CSS0001067' => 'camsi', 'CSS0005996' => 'camsi', 'CSS0006590' => 'camsi', 'CSS0009673' => 'camsi', 'CSS0010201' => 'camsi', 'CSS0010549' => 'camsi', 'CSS0011364' => 'camsi', 'CSS0014473' => 'camsi', 'CSS0014961' => 'camsi', 'CSS0020191' => 'camsi', 'CSS0021165' => 'camsi', 'CSS0022306' => 'camsi', 'CSS0030591' => 'camsi', 'CSS0030696' => 'camsi', 'CSS0032653' => 'camsi', 'CSS0037487' => 'camsi', 'CSS0041102' => 'camsi', 'CSS0041261' => 'camsi', 'CSS0046246' => 'camsi', 'CSS0049256' => 'camsi', 'DCAR_004075' => 'dca', 'DCAR_011538' => 'dca', 'DCAR_019553' => 'dca', 'DCAR_020952' => 'dca', 'DCAR_021739' => 'dca', 'DCAR_027407' => 'dca', 'DCAR_027913' => 'dca', 'DCAR_028066' => 'dca', 'Dinv05899' => 'din', 'Dinv07563' => 'din', 'Dinv08010' => 'din', 'Dinv14125' => 'din', 'Dinv20172' => 'din', 'Dinv30743' => 'din', 'Dinv31229' => 'din', 'Dinv34162' => 'din', 'Dinv36028' => 'din', 'Dinv39368' => 'din', 'Dinv40565' => 'din', 'Dinv41706' => 'din', 'Duzib052G0089' => 'dzi', 'Duzib116G0641' => 'dzi', 'Duzib132G0069' => 'dzi', 'Duzib132G1219' => 'dzi', 'Duzib147G0278' => 'dzi', 'Duzib160G0480' => 'dzi', 'Duzib170G0661' => 'dzi', 'Duzib177G0591' => 'dzi', 'Duzib187G1353' => 'dzi', 'Duzib192G0858' => 'dzi', 'Duzib192G0883' => 'dzi', 'Duzib213G0506' => 'dzi', 'Duzib235G0289' => 'dzi', 'Duzib251G0422' => 'dzi', 'ECA232G3898' => 'eca', 'ECA233G5950' => 'eca', 'ECA234G1699' => 'eca', 'ECA234G2421' => 'eca', 'ECA236G0426' => 'eca', 'ECA236G4331' => 'eca', 'ECA248G2573' => 'eca', 'EL10Ac1g00077' => 'bvu', 'EL10Ac1g01746' => 'bvu', 'EL10Ac2g03464' => 'bvu', 'EL10Ac4g08176' => 'bvu', 'EL10Ac7g17521' => 'bvu', 'EL10Ac8g20386' => 'bvu', 'EL10Ac9g21343' => 'bvu', 'EL10Ac9g22688' => 'bvu', 'Eucgr.B03434' => 'egr', 'Eucgr.D00618' => 'egr', 'Eucgr.E02395' => 'egr', 'Eucgr.F01129' => 'egr', 'Eucgr.F02622' => 'egr', 'Eucgr.F04207' => 'egr', 'FAN01G0570' => 'fan', 'FAN03G3351' => 'fan', 'FAN06G3702' => 'fan', 'FAN07G2149' => 'fan', 'FAN10G3758' => 'fan', 'FAN11G1170' => 'fan', 'FAN11G2050' => 'fan', 'FAN11G2724' => 'fan', 'FAN12G1700' => 'fan', 'FAN12G2028' => 'fan', 'FAN15G1160' => 'fan', 'FAN15G3063' => 'fan', 'FAN16G2540' => 'fan', 'FAN16G3077' => 'fan', 'FAN16G3624' => 'fan', 'FAN17G0221' => 'fan', 'FAN20G2492' => 'fan', 'FAN20G2905' => 'fan', 'FAN21G0548' => 'fan', 'FAN21G1300' => 'fan', 'FAN22G0077' => 'fan', 'FAN22G1315' => 'fan', 'FAN24G1280' => 'fan', 'FAN24G1445' => 'fan', 'FAN24G3527' => 'fan', 'FAN25G0464' => 'fan', 'FAN25G2885' => 'fan', 'FAN25G3270' => 'fan', 'FAN27G1101' => 'fan', 'FAN27G2846' => 'fan', 'FAN27G3524' => 'fan', 'FvH4_2g11770' => 'fve', 'FvH4_2g15630' => 'fve', 'FvH4_3g05570' => 'fve', 'FvH4_3g09110' => 'fve', 'FvH4_3g19940' => 'fve', 'FvH4_4g04821' => 'fve', 'FvH4_4g31480' => 'fve', 'FvH4_7g01740' => 'fve', 'Glyma.05G130400' => 'gma', 'Glyma.05G156400' => 'gma', 'Glyma.07G197000' => 'gma', 'Glyma.08G085151' => 'gma', 'Glyma.08G114500' => 'gma', 'Glyma.08G300400' => 'gma', 'Glyma.10G215800' => 'gma', 'Glyma.12G224400' => 'gma', 'Glyma.13G179300' => 'gma', 'Glyma.13G218151' => 'gma', 'Glyma.13G238800' => 'gma', 'Glyma.13G276900' => 'gma', 'Glyma.14G078200' => 'gma', 'Glyma.15G074500' => 'gma', 'Glyma.15G094100' => 'gma', 'Glyma.17G247200' => 'gma', 'Glyma.18G120100' => 'gma', 'Glyma.20G176000' => 'gma', 'Gohir.A01G063600' => 'ghi', 'Gohir.A01G170301' => 'ghi', 'Gohir.A02G060500' => 'ghi', 'Gohir.A05G133850' => 'ghi', 'Gohir.A05G161400' => 'ghi', 'Gohir.A06G012900' => 'ghi', 'Gohir.A06G035901' => 'ghi', 'Gohir.A06G127100' => 'ghi', 'Gohir.A06G210500' => 'ghi', 'Gohir.A08G008650' => 'ghi', 'Gohir.A09G072700' => 'ghi', 'Gohir.A09G088301' => 'ghi', 'Gohir.A10G040600' => 'ghi', 'Gohir.A12G036300' => 'ghi', 'Gohir.A12G143350' => 'ghi', 'Gohir.A12G165500' => 'ghi', 'Gohir.A13G145700' => 'ghi', 'Gohir.D01G050000' => 'ghi', 'Gohir.D01G051366' => 'ghi', 'Gohir.D01G161350' => 'ghi', 'Gohir.D02G065900' => 'ghi', 'Gohir.D05G164200' => 'ghi', 'Gohir.D05G355500' => 'ghi', 'Gohir.D06G010400' => 'ghi', 'Gohir.D06G111250' => 'ghi', 'Gohir.D06G132000' => 'ghi', 'Gohir.D06G210500' => 'ghi', 'Gohir.D07G165675' => 'ghi', 'Gohir.D08G062240' => 'ghi', 'Gohir.D08G086101' => 'ghi', 'Gohir.D08G138060' => 'ghi', 'Gohir.D09G072300' => 'ghi', 'Gohir.D10G041400' => 'ghi', 'Gohir.D11G191020' => 'ghi', 'Gohir.D11G212066' => 'ghi', 'Gohir.D12G036300' => 'ghi', 'Gohir.D12G168600' => 'ghi', 'Gohir.D13G150600' => 'ghi', 'Gorai.001G057300' => 'gra', 'Gorai.002G069900' => 'gra', 'Gorai.002G200000' => 'gra', 'Gorai.003G067600' => 'gra', 'Gorai.005G074800' => 'gra', 'Gorai.006G087300' => 'gra', 'Gorai.008G037500' => 'gra', 'Gorai.008G181400' => 'gra', 'Gorai.009G169400' => 'gra', 'Gorai.009G387900' => 'gra', 'Gorai.010G013300' => 'gra', 'Gorai.010G153800' => 'gra', 'Gorai.010G255800' => 'gra', 'Gorai.011G043700' => 'gra', 'Gorai.011G198900' => 'gra', 'Gorai.013G168400' => 'gra', 'GSVIVG01005212001' => 'vvi', 'GSVIVG01006163001' => 'vvi', 'GSVIVG01009625001' => 'vvi', 'GSVIVG01014338001' => 'vvi', 'GSVIVG01020005001' => 'vvi', 'GSVIVG01021450001' => 'vvi', 'GSVIVG01023975001' => 'vvi', 'GSVIVG01034490001' => 'vvi', 'HanXRQChr04g0112071' => 'han', 'HanXRQChr05g0131151' => 'han', 'HanXRQChr09g0262371' => 'han', 'HanXRQChr09g0268401' => 'han', 'HanXRQChr10g0279241' => 'han', 'HanXRQChr10g0297961' => 'han', 'HanXRQChr11g0326231' => 'han', 'HanXRQChr11g0328471' => 'han', 'HanXRQChr16g0507941' => 'han', 'HanXRQChr17g0560211' => 'han', 'Haze_02108' => 'cav', 'Haze_02428' => 'cav', 'Haze_05593' => 'cav', 'Haze_06448' => 'cav', 'Haze_09427' => 'cav', 'Haze_12022' => 'cav', 'Haze_17612' => 'cav', 'Haze_17928' => 'cav', 'Hma1.2p1_0032F.1_g019250' => 'hma', 'Hma1.2p1_0163F.1_g072690' => 'hma', 'Hma1.2p1_0265F.1_g106710' => 'hma', 'Hma1.2p1_0286F.1_g113970' => 'hma', 'Hma1.2p1_0363F.1_g136640' => 'hma', 'Hma1.2p1_0584F.1_g183470' => 'hma', 'Hma1.2p1_0885F.1_g232570' => 'hma', 'HPP92_006022' => 'vpl', 'HPP92_007320' => 'vpl', 'HPP92_011521' => 'vpl', 'HPP92_019387' => 'vpl', 'HPP92_024038' => 'vpl', 'Hund05891' => 'sun', 'Hund06450' => 'sun', 'Hund12053' => 'sun', 'Hund16800' => 'sun', 'Hund21222' => 'sun', 'Hund22896' => 'sun', 'Hund23746' => 'sun', 'Hund27083' => 'sun', 'Lalb_Chr02g0141831' => 'lal', 'Lalb_Chr02g0141841' => 'lal', 'Lalb_Chr05g0220411' => 'lal', 'Lalb_Chr06g0162081' => 'lal', 'Lalb_Chr09g0327651' => 'lal', 'Lalb_Chr13g0295051' => 'lal', 'Lalb_Chr15g0086801' => 'lal', 'Lalb_Chr16g0383781' => 'lal', 'Lalb_Chr16g0383791' => 'lal', 'Lalb_Chr18g0055441' => 'lal', 'Lalb_Chr18g0059611' => 'lal', 'Lalb_Chr20g0109661' => 'lal', 'Lalb_Chr20g0109831' => 'lal', 'Lalb_Chr20g0121871' => 'lal', 'Lalb_Chr22g0355361' => 'lal', 'Lalb_Chr25g0286371' => 'lal', 'Lj1A1187G43' => 'lonja', 'Lj1A1205T50' => 'lonja', 'Lj1A800G33' => 'lonja', 'Lj1C1187T7' => 'lonja', 'Lj1C843T11' => 'lonja', 'Lj1g0010940' => 'lja', 'Lj2A288T69' => 'lonja', 'Lj3g0024276' => 'lja', 'Lj4A47T76' => 'lonja', 'Lj4g0005805' => 'lja', 'Lj4g0006097' => 'lja', 'Lj4g0008528' => 'lja', 'Lj4g0024907' => 'lja', 'Lj5g0012472' => 'lja', 'Lj5g0018648' => 'lja', 'Lj6C789G1' => 'lonja', 'Lj6g0004000' => 'lja', 'Lj7A292G67' => 'lonja', 'Lj7A292T64' => 'lonja', 'Lj9A400T58' => 'lonja', 'Lsat_1_v5_gn_1_126181' => 'lsa', 'Lsat_1_v5_gn_4_123041' => 'lsa', 'Lsat_1_v5_gn_4_133620' => 'lsa', 'Lsat_1_v5_gn_4_53221' => 'lsa', 'Lsat_1_v5_gn_4_71961' => 'lsa', 'Lsat_1_v5_gn_7_105241' => 'lsa', 'Lsat_1_v5_gn_7_21361' => 'lsa', 'Lsat_1_v5_gn_7_28860' => 'lsa', 'Lsat_1_v5_gn_7_31260' => 'lsa', 'Lsat_1_v5_gn_8_52801' => 'lsa', 'Manes.02G191400' => 'mes', 'Manes.03G110100' => 'mes', 'Manes.04G071100' => 'mes', 'Manes.05G100500' => 'mes', 'Manes.05G164700' => 'mes', 'Manes.15G087000' => 'mes', 'Manes.15G121500' => 'mes', 'Manes.16G028300' => 'mes', 'Manes.17G046100' => 'mes', 'Manes.17G069800' => 'mes', 'Manes.18G100500' => 'mes', 'Mapoly0002s0109' => 'mpo', 'Mapoly0024s0007' => 'mpo', 'Mapoly0089s0032' => 'mpo', 'MBI04_g42241_MAGBIO' => 'mbi', 'MBI05_g11988_MAGBIO' => 'mbi', 'MBI05_g35452_MAGBIO' => 'mbi', 'MBI07_g30179_MAGBIO' => 'mbi', 'MBI07_g35859_MAGBIO' => 'mbi', 'MBI07_g35860_MAGBIO' => 'mbi', 'MBI07_g37166_MAGBIO' => 'mbi', 'MBI08_g18172_MAGBIO' => 'mbi', 'MBI09_g08441_MAGBIO' => 'mbi', 'MBI13_g01676_MAGBIO' => 'mbi', 'MBI14_g42955_MAGBIO' => 'mbi', 'MBI16_g13161_MAGBIO' => 'mbi', 'MBI17_g27204_MAGBIO' => 'mbi', 'MBI19_g21595_MAGBIO' => 'mbi', 'MD00G1148400' => 'mdo', 'MD02G1301200' => 'mdo', 'MD03G1227800' => 'mdo', 'MD05G1041100' => 'mdo', 'MD05G1124800' => 'mdo', 'MD05G1284000' => 'mdo', 'MD05G1338800' => 'mdo', 'MD05G1338900' => 'mdo', 'MD07G1022800' => 'mdo', 'MD10G1047500' => 'mdo', 'MD10G1127500' => 'mdo', 'MD10G1262300' => 'mdo', 'MD10G1293800' => 'mdo', 'MD16G1074300' => 'mdo', 'Medtr1g021670' => 'mtr', 'Medtr1g096320' => 'mtr', 'Medtr2g013690' => 'mtr', 'Medtr2g019450' => 'mtr', 'Medtr2g085170' => 'mtr', 'Medtr4g088785' => 'mtr', 'Medtr8g055930' => 'mtr', 'Medtr8g085850' => 'mtr', 'MELO3C002605.2' => 'cme', 'MELO3C003891.2' => 'cme', 'MELO3C004012.2' => 'cme', 'MELO3C007134.2' => 'cme', 'MELO3C008118.2' => 'cme', 'MELO3C016700.2' => 'cme', 'MELO3C024127.2' => 'cme', 'MELO3C033361.2' => 'cme', 'MELO3C033362.2' => 'cme', 'Migut.C00430' => 'egut', 'Migut.C01246' => 'egut', 'Migut.E00101' => 'egut', 'Migut.H01486' => 'egut', 'Migut.H01939' => 'egut', 'Migut.K00360' => 'egut', 'Migut.M00910' => 'egut', 'Migut.M01139' => 'egut', 'Migut.N02677' => 'egut', 'MSTRG.13252' => 'ama', 'MSTRG.14701' => 'ama', 'MSTRG.1521' => 'ama', 'MSTRG.15884' => 'ama', 'MSTRG.16242' => 'ama', 'MSTRG.22285' => 'ama', 'MSTRG.22444' => 'ama', 'MSTRG.2349' => 'ama', 'MSTRG.26308' => 'ama', 'MSTRG.28296' => 'ama', 'MSTRG.9895' => 'ama', 'Nitab4.5_0000110g0060' => 'nta', 'Nitab4.5_0000420g0130' => 'nta', 'Nitab4.5_0000422g0030' => 'nta', 'Nitab4.5_0000560g0180' => 'nta', 'Nitab4.5_0000703g0100' => 'nta', 'Nitab4.5_0000786g0200' => 'nta', 'Nitab4.5_0001336g0020' => 'nta', 'Nitab4.5_0001796g0030' => 'nta', 'Nitab4.5_0003348g0060' => 'nta', 'Nitab4.5_0003698g0040' => 'nta', 'Nitab4.5_0003942g0090' => 'nta', 'Nitab4.5_0004775g0070' => 'nta', 'Nitab4.5_0004864g0030' => 'nta', 'Nitab4.5_0005615g0020' => 'nta', 'Nitab4.5_0009288g0030' => 'nta', 'Nitab4.5_0009341g0010' => 'nta', 'Nitab4.5_0009535g0010' => 'nta', 'Nn1g03995' => 'nnu', 'Nn1g04100' => 'nnu', 'Nn1g06530' => 'nnu', 'Nn3g16404' => 'nnu', 'Nn3g17212' => 'nnu', 'Nn3g20776' => 'nnu', 'Nn3g21923' => 'nnu', 'Nn5g27737' => 'nnu', 'Nn5g29461' => 'nnu', 'Nn7g38355' => 'nnu', 'Nn8g39873' => 'nnu', 'Oeu000548.2' => 'oeu', 'Oeu004672.1' => 'oeu', 'Oeu015605.2' => 'oeu', 'Oeu016092.1' => 'oeu', 'Oeu017879.3' => 'oeu', 'Oeu024910.1' => 'oeu', 'Oeu028965.1' => 'oeu', 'Oeu031269.1' => 'oeu', 'Oeu031270.1' => 'oeu', 'Oeu032535.1' => 'oeu', 'Oeu034151.1' => 'oeu', 'Oeu034152.1' => 'oeu', 'Oeu034588.2' => 'oeu', 'Oeu050846.1' => 'oeu', 'Oeu050849.2' => 'oeu', 'Oeu051063.2' => 'oeu', 'Oeu052368.1' => 'oeu', 'Oeu052370.1' => 'oeu', 'Os01g0210400' => 'osa', 'Os01g0304300' => 'osa', 'Os01g0749100' => 'osa', 'Os02g0745800' => 'osa', 'Os03g0769050' => 'osa', 'Os05g0531500' => 'osa', 'Os06g0724300' => 'osa', 'Os11g0198100' => 'osa', 'Peaxi162Scf00069g01425' => 'pax', 'Peaxi162Scf00280g00811' => 'pax', 'Peaxi162Scf00310g00615' => 'pax', 'Peaxi162Scf00362g00542' => 'pax', 'Peaxi162Scf00461g00310' => 'pax', 'Peaxi162Scf00530g00118' => 'pax', 'Peaxi162Scf00541g00057' => 'pax', 'Peaxi162Scf00661g00017' => 'pax', 'Peaxi162Scf00926g00027' => 'pax', 'Peaxi162Scf01064g00263' => 'pax', 'Peaxi162Scf01211g00135' => 'pax', 'PGR004G2336' => 'pgr', 'PGR042G0327' => 'pgr', 'PGR042G1957' => 'pgr', 'PGR042G2003' => 'pgr', 'PGR042G3929' => 'pgr', 'PGR083G1137' => 'pgr', 'PGR083G1364' => 'pgr', 'PGSC0003DMG400003381' => 'stu', 'PGSC0003DMG400003417' => 'stu', 'PGSC0003DMG400008981' => 'stu', 'PGSC0003DMG400012417' => 'stu', 'PGSC0003DMG400012823' => 'stu', 'PGSC0003DMG400016885' => 'stu', 'PGSC0003DMG400022812' => 'stu', 'PGSC0003DMG400029726' => 'stu', 'PGSC0003DMG401009243' => 'stu', 'PGSC0003DMG401031505' => 'stu', 'PGSC0003DMG402031505' => 'stu', 'Phvul.001G017600' => 'pvu', 'Phvul.002G193500' => 'pvu', 'Phvul.002G228900' => 'pvu', 'Phvul.002G236800' => 'pvu', 'Phvul.003G049500' => 'pvu', 'Phvul.005G072000' => 'pvu', 'Phvul.006G164800' => 'pvu', 'Phvul.006G185100' => 'pvu', 'Phvul.007G090000' => 'pvu', 'Potri.001G399800' => 'ptr', 'Potri.002G149900' => 'ptr', 'Potri.004G044100' => 'ptr', 'Potri.004G177600' => 'ptr', 'Potri.009G138000' => 'ptr', 'Potri.010G094000' => 'ptr', 'Potri.011G053000' => 'ptr', 'Potri.011G119300' => 'ptr', 'Potri.013G113700' => 'ptr', 'Potri.018G107800' => 'ptr', 'Potri.019G084100' => 'ptr', 'Pp3c14_23720' => 'ppa', 'Pp3c16_6340' => 'ppa', 'Pp3c23_13420' => 'ppa', 'Pp3c24_2740' => 'ppa', 'Pp3c25_860' => 'ppa', 'Pp3c8_21750' => 'ppa', 'Prupe.1G273000' => 'ppe', 'Prupe.1G273700' => 'ppe', 'Prupe.1G274100' => 'ppe', 'Prupe.2G023300' => 'ppe', 'Prupe.4G048000' => 'ppe', 'Prupe.4G080400' => 'ppe', 'Prupe.4G181200' => 'ppe', 'Prupe.8G056900' => 'ppe', 'Prupe.8G168700' => 'ppe', 'Psat1g189080' => 'psa', 'Psat1g204760' => 'psa', 'Psat4g175560' => 'psa', 'Psat4g177720' => 'psa', 'Psat5g244240' => 'psa', 'Psat6g010720' => 'psa', 'Psat6g187200' => 'psa', 'Psat7g072040' => 'psa', 'PSO017G3501' => 'pso', 'PSO063G2148' => 'pso', 'PSO063G5608' => 'pso', 'PSO210G6392' => 'pso', 'PSO541G2319' => 'pso', 'PSO541G2836' => 'pso', 'PSO541G4012' => 'pso', 'PSO541G6253' => 'pso', 'PSO675G0580' => 'pso', 'PSO675G0856' => 'pso', 'PSO675G5635' => 'pso', 'PSO675G9157' => 'pso', 'PSO832G1660' => 'pso', 'PSO832G1969' => 'pso', 'QL02p007186' => 'qlo', 'QL02p033904' => 'qlo', 'QL03p064391' => 'qlo', 'QL05p040593' => 'qlo', 'QL05p058242' => 'qlo', 'QL08p021825' => 'qlo', 'QL11p004981' => 'qlo', 'RcHm_v2.0_Chr1g0318301' => 'rch', 'RcHm_v2.0_Chr4g0418501' => 'rch', 'RcHm_v2.0_Chr4g0439971' => 'rch', 'RcHm_v2.0_Chr5g0008541' => 'rch', 'RcHm_v2.0_Chr5g0014101' => 'rch', 'RcHm_v2.0_Chr5g0014131' => 'rch', 'RcHm_v2.0_Chr5g0033621' => 'rch', 'RcHm_v2.0_Chr6g0272041' => 'rch', 'RcHm_v2.0_Chr6g0278831' => 'rch', 'Rhsim02G0130400' => 'rsi', 'Rhsim02G0171100' => 'rsi', 'Rhsim05G0053000' => 'rsi', 'Rhsim05G0053100' => 'rsi', 'Rhsim06G0096500' => 'rsi', 'Rhsim06G0096600' => 'rsi', 'Rhsim06G0199100' => 'rsi', 'Rhsim12G0062300' => 'rsi', 'Rhsim12G0062800' => 'rsi', 'Sabra02G0118600' => 'sbr', 'Sabra04G0027300' => 'sbr', 'Sabra04G0119500' => 'sbr', 'Sabra08G0112500' => 'sbr', 'Sabra11G0036800' => 'sbr', 'Sabra11G0103800' => 'sbr', 'Sabra13G0096300' => 'sbr', 'Sabra16G0262300' => 'sbr', 'Sabra18G0091700' => 'sbr', 'Sabra19G0095400' => 'sbr', 'SalBow6G3080' => 'sbo', 'SalBow7G1157' => 'sbo', 'SalBow7G2123' => 'sbo', 'SalBow7G2285' => 'sbo', 'SalBow7G3537' => 'sbo', 'SalBow8G2947' => 'sbo', 'SalBow8G4463' => 'sbo', 'SalBow8G5466' => 'sbo', 'Sc01g0001750' => 'sci', 'Sc02g0006640' => 'sci', 'Sc02g0006670' => 'sci', 'Sc04g0008220' => 'sci', 'Sc05g0006190' => 'sci', 'Sc08g0002760' => 'sci', 'Sc17g0006170' => 'sci', 'Sc22g0002050' => 'sci', 'Sc23g0001190' => 'sci', 'Sc24g0000980' => 'sci', 'Sed0006245' => 'sed', 'Sed0007543' => 'sed', 'Sed0009411' => 'sed', 'Sed0010765' => 'sed', 'Sed0012944' => 'sed', 'Sed0014682' => 'sed', 'Sed0016174' => 'sed', 'Sed0016796' => 'sed', 'Sed0020317' => 'sed', 'Sed0021467' => 'sed', 'SEGI_01316' => 'sgi', 'SEGI_03374' => 'sgi', 'SEGI_16265' => 'sgi', 'SEGI_18569' => 'sgi', 'SEGI_20351' => 'sgi', 'SEGI_26395' => 'sgi', 'SEGI_29469' => 'sgi', 'SEGI_34771' => 'sgi', 'SEGI_36769' => 'sgi', 'SEGI_37139' => 'sgi', 'SGA_v2.0_scaffold100G29687' => 'sas', 'SGA_v2.0_scaffold118G32472' => 'sas', 'SGA_v2.0_scaffold14G07051' => 'sas', 'SGA_v2.0_scaffold183G39845' => 'sas', 'SGA_v2.0_scaffold1G00174' => 'sas', 'SGA_v2.0_scaffold22G09714' => 'sas', 'SGA_v2.0_scaffold333G48992' => 'sas', 'SGA_v2.0_scaffold46G17491' => 'sas', 'SGA_v2.0_scaffold49G18294' => 'sas', 'SGA_v2.0_scaffold63G21658' => 'sas', 'SHI01741' => 'shi', 'SHI05771' => 'shi', 'SHI18077' => 'shi', 'SHI20525' => 'shi', 'SHI20527' => 'shi', 'SHI20528' => 'shi', 'SMO172G0185' => 'smo', 'SMO198G0020' => 'smo', 'SMO351G0006' => 'smo', 'SMO356G0118' => 'smo', 'SMO358G0296' => 'smo', 'SMO367G0079' => 'smo', 'SMO367G1277' => 'smo', 'Solyc01g014220.3' => 'sly', 'Solyc01g111770.2' => 'sly', 'Solyc02g078180.3' => 'sly', 'Solyc03g006430.3' => 'sly', 'Solyc03g006456.1' => 'sly', 'Solyc03g079860.2' => 'sly', 'Solyc04g079770.3' => 'sly', 'Solyc05g007430.4' => 'sly', 'Solyc07g063150.3' => 'sly', 'Solyc08g016620.3' => 'sly', 'Solyc09g057590.3' => 'sly', 'Solyc09g057600.1' => 'sly', 'Solyc10g009050.3' => 'sly', 'Solyc11g017420.2' => 'sly', 'Sopen01g053810' => 'spe', 'Sopen02g023040' => 'spe', 'Sopen03g002440' => 'spe', 'Sopen04g033350' => 'spe', 'Sopen05g003310' => 'spe', 'Sopen07g004050' => 'spe', 'Sopen07g031340' => 'spe', 'Sopen08g006990' => 'spe', 'Sopen10g004830' => 'spe', 'Sopen11g009370' => 'spe', 'Sp1g24450' => 'spa', 'Sp1g29670' => 'spa', 'Sp1g39600' => 'spa', 'Sp2g11080' => 'spa', 'Sp2g13970' => 'spa', 'Sp4g16130' => 'spa', 'Sp6g13080' => 'spa', 'Sp7g37270' => 'spa', 'TAR371G0065' => 'tar', 'TAR376G0340' => 'tar', 'TAR376G0435' => 'tar', 'TAR381G0002' => 'tar', 'TAR381G1236' => 'tar', 'TAR624G0055' => 'tar', 'TAR624G0324' => 'tar', 'TAR624G0696' => 'tar', 'TAR624G0906' => 'tar', 'TAR625G0107' => 'tar', 'TAR626G0015' => 'tar', 'TAR626G1356' => 'tar', 'TAR627G0888' => 'tar', 'TAR628G0399' => 'tar', 'TAR628G1327' => 'tar', 'TAR629G2831' => 'tar', 'TAR629G2874' => 'tar', 'TAR633G1432' => 'tar', 'TAR633G2771' => 'tar', 'THA.LOC104803394' => 'tha', 'THA.LOC104805153' => 'tha', 'THA.LOC104806784' => 'tha', 'THA.LOC104810473' => 'tha', 'THA.LOC104813100' => 'tha', 'THA.LOC104814215' => 'tha', 'THA.LOC104815554' => 'tha', 'THA.LOC104820544' => 'tha', 'THA.LOC104824754' => 'tha', 'THA.LOC104827717' => 'tha', 'Thecc.02G031400' => 'tca', 'Thecc.02G055900' => 'tca', 'Thecc.02G350800' => 'tca', 'Thecc.06G150900' => 'tca', 'Thecc.06G186600' => 'tca', 'Thecc.07G089600' => 'tca', 'Thecc.08G020400' => 'tca', 'Thecc.08G182100' => 'tca', 'Thhalv10000873m.g' => 'esa', 'Thhalv10004185m.g' => 'esa', 'Thhalv10006981m.g' => 'esa', 'Thhalv10007204m.g' => 'esa', 'Thhalv10011374m.g' => 'esa', 'Thhalv10013482m.g' => 'esa', 'Thhalv10017801m.g' => 'esa', 'Thhalv10024983m.g' => 'esa', 'TPR.G12072' => 'tpr', 'TPR.G15769' => 'tpr', 'TPR.G16504' => 'tpr', 'TPR.G16506' => 'tpr', 'TPR.G24345' => 'tpr', 'TPR.G26666' => 'tpr', 'TPR.G27320' => 'tpr', 'TPR.G31819' => 'tpr', 'TPR.G38879' => 'tpr', 'TPR.G39015' => 'tpr', 'TPR.G8819' => 'tpr', 'TWI09G0924' => 'twi', 'TWI12G0811' => 'twi', 'TWI12G1294' => 'twi', 'TWI31G0150' => 'twi', 'TWI36G1262' => 'twi', 'TWI38G1287' => 'twi', 'TWI38G1633' => 'twi', 'TWI38G1982' => 'twi', 'TWI39G0116' => 'twi', 'TWI60G1011' => 'twi', 'TWI63G0171' => 'twi', 'TWI73G0839' => 'twi', 'TWI79G1511' => 'twi', 'unitig_0.g915' => 'ugi', 'unitig_0.g916' => 'ugi', 'unitig_21.g20219' => 'ugi', 'unitig_21.g20416' => 'ugi', 'unitig_578.g16132' => 'ugi', 'unitig_578.g16718' => 'ugi', 'unitig_62.g23481' => 'ugi', 'unitig_744.g24535' => 'ugi', 'unitig_749.g13525' => 'ugi', 'vmacro01248' => 'vma', 'vmacro02290' => 'vma', 'vmacro10946' => 'vma', 'vmacro11865' => 'vma', 'vmacro12493' => 'vma', 'vmacro17322' => 'vma', 'vmacro21599' => 'vma', 'vmacro23041' => 'vma', 'VMungo0251G0004' => 'vmu', 'VMungo0251G2639' => 'vmu', 'VMungo0251G2967' => 'vmu', 'VMungo0540G0864' => 'vmu', 'VMungo0540G1569' => 'vmu', 'VMungo0647G0317' => 'vmu', 'VMungo0720G1373' => 'vmu', 'VMungo0720G1508' => 'vmu', 'VMungo1080G0485' => 'vmu', 'VMungo1215G3177' => 'vmu', 'Zm00001eb112600' => 'zma', 'Zm00001eb120220' => 'zma', 'Zm00001eb153240' => 'zma', 'Zm00001eb168880' => 'zma', 'Zm00001eb213920' => 'zma', 'Zm00001eb228280' => 'zma', 'Zm00001eb254580' => 'zma', 'Zm00001eb272180' => 'zma', 'Zm00001eb293190' => 'zma', 'Zm00001eb322930' => 'zma', 'Zm00001eb353360' => 'zma', 'Zm00001eb353390' => 'zma', 'Zm00001eb353430' => 'zma', 'Zm00001eb353440' => 'zma', 'Zm00001eb353780' => 'zma' ), 'gf_id' => 'HOM05D000499', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000499' ), 'data_identifier' => 'HOM05D000499', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000499', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1066', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p29780' => 'bna', 'A02p33180' => 'bna', 'A03p16470' => 'bna', 'A03p66010' => 'bna', 'A04p25970' => 'bna', 'A06p01270' => 'bna', 'A06p46080' => 'bna', 'A07p11400' => 'bna', 'A08p01840' => 'bna', 'A08p08230' => 'bna', 'A08p25740' => 'bna', 'A09p32070' => 'bna', 'A09p37830' => 'bna', 'A09p42840' => 'bna', 'A09p42850' => 'bna', 'Aa31LG10G2060' => 'aar', 'Aa31LG2G7410' => 'aar', 'Aa31LG6G10200' => 'aar', 'Aa31LG6G16680' => 'aar', 'Aa31LG6G8470' => 'aar', 'Aa31LG9G12730' => 'aar', 'Aa31LG9G13680' => 'aar', 'Aa31LG9G14920' => 'aar', 'Aa31LG9G6650' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4977' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5467' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3254' => 'aag', 'Actinidia02578' => 'ach', 'Actinidia07693' => 'ach', 'Actinidia08413' => 'ach', 'Actinidia08414' => 'ach', 'Actinidia15289' => 'ach', 'Actinidia19871' => 'ach', 'Actinidia21475' => 'ach', 'Actinidia22576' => 'ach', 'Actinidia28327' => 'ach', 'Actinidia32491' => 'ach', 'Actinidia39463' => 'ach', 'Actinidia39571' => 'ach', 'Ah.01g013750' => 'amhyb', 'Ah.01g023210' => 'amhyb', 'Ah.04g164850' => 'amhyb', 'Ah.05g178060' => 'amhyb', 'Ah.07g204270' => 'amhyb', 'Ah.07g208480' => 'amhyb', 'Ah.09g237410' => 'amhyb', 'Ah.14g089460' => 'amhyb', 'AL1G41790' => 'aly', 'AL1G49050' => 'aly', 'AL1G53810' => 'aly', 'AL1G61400' => 'aly', 'AL4G18580' => 'aly', 'AL5G12510' => 'aly', 'AL5G12540' => 'aly', 'AL6G43230' => 'aly', 'AL7G10370' => 'aly', 'AL7G19250' => 'aly', 'AL8G12240' => 'aly', 'AL8G18540' => 'aly', 'Aqoxy1G02409' => 'aox', 'Aqoxy2G03993' => 'aox', 'Aqoxy3G03357' => 'aox', 'Aqoxy4G00785' => 'aox', 'Aqoxy5G02598' => 'aox', 'Aqoxy6G00132' => 'aox', 'Aqoxy7G01776' => 'aox', 'Aqoxy7G02316' => 'aox', 'Aqoxy7G03973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.12AFKW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B8730' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27IQR1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3F75VG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3RE0GA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41TCQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.527VTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FIR39' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5W8UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DA38EV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ63HS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H1I32C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HC27T5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4M8AP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7N3CZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9UVDZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LS1NQA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT1D4B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SKC4TM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCFV76' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF9Q1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQWD9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1ZM88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WE07RT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YCK7VH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJE6Q6' => 'arhy', 'AT1G28240' => 'ath', 'AT1G34550' => 'ath', 'AT1G53040' => 'ath', 'AT2G02910' => 'ath', 'AT4G09630' => 'ath', 'AT4G38500' => 'ath', 'AT5G42660' => 'ath', 'AT5G46220' => 'ath', 'ATR0152G026' => 'atr', 'ATR0564G343' => 'atr', 'ATR0706G151' => 'atr', 'ATR0733G207' => 'atr', 'ATR0751G234' => 'atr', 'ATR0807G048' => 'atr', 'ATR1091G084' => 'atr', 'Atru.chr10.1229' => 'acertr', 'Atru.chr10.1230' => 'acertr', 'Atru.chr10.1874' => 'acertr', 'Atru.chr11.1808' => 'acertr', 'Atru.chr13.1795' => 'acertr', 'Atru.chr13.570' => 'acertr', 'Atru.chr2.2608' => 'acertr', 'Atru.chr2.2609' => 'acertr', 'Atru.chr5.3428' => 'acertr', 'Atru.chr8.1171' => 'acertr', 'AUR62004651' => 'cqu', 'AUR62008675' => 'cqu', 'AUR62010014' => 'cqu', 'AUR62013004' => 'cqu', 'AUR62014825' => 'cqu', 'AUR62015015' => 'cqu', 'AUR62015151' => 'cqu', 'AUR62017020' => 'cqu', 'AUR62019422' => 'cqu', 'AUR62023570' => 'cqu', 'AUR62025571' => 'cqu', 'AUR62029098' => 'cqu', 'AUR62033863' => 'cqu', 'AUR62034296' => 'cqu', 'AUR62040075' => 'cqu', 'BcaB02g07334' => 'bca', 'BcaB02g10575' => 'bca', 'BcaB03g12119' => 'bca', 'BcaB03g12120' => 'bca', 'BcaB03g13945' => 'bca', 'BcaB04g17123' => 'bca', 'BcaB04g17867' => 'bca', 'BcaB04g19839' => 'bca', 'BcaB07g30317' => 'bca', 'BcaB07g32432' => 'bca', 'BcaB07g33362' => 'bca', 'BcaB08g36611' => 'bca', 'BcaC01g00028' => 'bca', 'BcaC01g01356' => 'bca', 'BcaC01g02034' => 'bca', 'BcaC01g06051' => 'bca', 'BcaC03g16839' => 'bca', 'BcaC03g17176' => 'bca', 'BcaC05g26829' => 'bca', 'BcaC06g31490' => 'bca', 'BcaC06g35344' => 'bca', 'BcaC06g36570' => 'bca', 'BcaC07g37537' => 'bca', 'BcaC08g43491' => 'bca', 'BcaC08g43773' => 'bca', 'BcaNung00234' => 'bca', 'BcaNung01982' => 'bca', 'BcaNung03707' => 'bca', 'BcaNung06454' => 'bca', 'BolC2t10762H' => 'bol', 'BolC2t11191H' => 'bol', 'BolC3t14322H' => 'bol', 'BolC3t19747H' => 'bol', 'BolC3t21425H' => 'bol', 'BolC4t27800H' => 'bol', 'BolC5t31423H' => 'bol', 'BolC6t35951H' => 'bol', 'BolC6t36282H' => 'bol', 'BolC7t40678H' => 'bol', 'BolC7t40679H' => 'bol', 'BolC7t42222H' => 'bol', 'BolC7t43492H' => 'bol', 'BolC7t46785H' => 'bol', 'BolC8t47853H' => 'bol', 'BolC9t56805H' => 'bol', 'BraA02t08000Z' => 'bra', 'BraA02t08341Z' => 'bra', 'BraA03t10936Z' => 'bra', 'BraA03t15657Z' => 'bra', 'BraA04t18100Z' => 'bra', 'BraA05t20523Z' => 'bra', 'BraA06t23353Z' => 'bra', 'BraA06t27473Z' => 'bra', 'BraA06t27769Z' => 'bra', 'BraA07t28928Z' => 'bra', 'BraA08t32236Z' => 'bra', 'BraA08t32841Z' => 'bra', 'BraA08t34524Z' => 'bra', 'BraA09t38742Z' => 'bra', 'BraA09t39295Z' => 'bra', 'C02p47180' => 'bna', 'C02p50990' => 'bna', 'C03p19360' => 'bna', 'C03p74950' => 'bna', 'C03p91000' => 'bna', 'C04p63260' => 'bna', 'C05p27050' => 'bna', 'C06p08750' => 'bna', 'C06p11490' => 'bna', 'C07p02820' => 'bna', 'C07p17180' => 'bna', 'C07p29440' => 'bna', 'C07p63730' => 'bna', 'C09p39260' => 'bna', 'CAN.G1164.34' => 'can', 'CAN.G1164.39' => 'can', 'CAN.G1530.3' => 'can', 'CAN.G162.61' => 'can', 'CAN.G176.6' => 'can', 'CAN.G289.49' => 'can', 'CAN.G370.21' => 'can', 'CAN.G370.22' => 'can', 'CAN.G371.117' => 'can', 'CAN.G58.37' => 'can', 'CAN.G588.98' => 'can', 'CANSAT21G2266' => 'cansat', 'CANSAT25G2799' => 'cansat', 'CANSAT35G0862' => 'cansat', 'CANSAT35G1704' => 'cansat', 'CANSAT35G1760' => 'cansat', 'CANSAT56G3971' => 'cansat', 'CANSAT56G4116' => 'cansat', 'CANSAT80G1259' => 'cansat', 'CARHR027730' => 'chi', 'CARHR033880' => 'chi', 'CARHR043270' => 'chi', 'CARHR145330' => 'chi', 'CARHR145340' => 'chi', 'CARHR175570' => 'chi', 'CARHR181570' => 'chi', 'CARHR258470' => 'chi', 'CARHR260490' => 'chi', 'CARHR294220' => 'chi', 'Carub.0001s2668' => 'cru', 'Carub.0001s3257' => 'cru', 'Carub.0001s4220' => 'cru', 'Carub.0005s0179' => 'cru', 'Carub.0006s2807' => 'cru', 'Carub.0007s0039' => 'cru', 'Carub.0008s0169' => 'cru', 'Carub.0008s0636' => 'cru', 'Ca_00338_v3' => 'car', 'Ca_00542_v3' => 'car', 'Ca_01844_v3' => 'car', 'Ca_10611_v3' => 'car', 'Ca_13326_v3' => 'car', 'Ca_17944_v3' => 'car', 'Ca_18546_v3' => 'car', 'Ca_24219_v3' => 'car', 'Ca_29972_v3' => 'car', 'CBR_g3681' => 'cbr', 'CBR_g40021' => 'cbr', 'Cc01_g08140' => 'ccan', 'Cc02_g13410' => 'ccan', 'Cc02_g37480' => 'ccan', 'Cc05_g12030' => 'ccan', 'Cc09_g03370' => 'ccan', 'Cc09_g10300' => 'ccan', 'Cc10_g03530' => 'ccan', 'Cc10_g11380' => 'ccan', 'CDE01G0176' => 'cde', 'CDE02G0675' => 'cde', 'CDE02G0942' => 'cde', 'CDE02G1153' => 'cde', 'CDE02G4177' => 'cde', 'CDE04G2117' => 'cde', 'CDE04G2736' => 'cde', 'CDE08G1161' => 'cde', 'CDE09G1238' => 'cde', 'Cfa000467' => 'cfa', 'Cfa000947' => 'cfa', 'Cfa004969' => 'cfa', 'Cfa005284' => 'cfa', 'Cfa008993' => 'cfa', 'Cfa018187' => 'cfa', 'Cfa018454' => 'cfa', 'Cfa020585' => 'cfa', 'Ciclev10000424m.g' => 'ccl', 'Ciclev10003605m.g' => 'ccl', 'Ciclev10007828m.g' => 'ccl', 'Ciclev10014620m.g' => 'ccl', 'Ciclev10015169m.g' => 'ccl', 'Ciclev10018291m.g' => 'ccl', 'Ciclev10028256m.g' => 'ccl', 'Ciclev10033822m.g' => 'ccl', 'CiPaw.05G060300' => 'cil', 'CiPaw.05G085000' => 'cil', 'CiPaw.06G083700' => 'cil', 'CiPaw.06G120300' => 'cil', 'CiPaw.09G060500' => 'cil', 'CiPaw.09G123800' => 'cil', 'CiPaw.11G169700' => 'cil', 'CiPaw.12G118300' => 'cil', 'CiPaw.15G071000' => 'cil', 'CiPaw.15G081900' => 'cil', 'ClCG01G024610' => 'cla', 'ClCG03G006070' => 'cla', 'ClCG05G019250' => 'cla', 'ClCG09G009500' => 'cla', 'ClCG11G008200' => 'cla', 'ClCG11G018080' => 'cla', 'COL.COLO4_17373' => 'col', 'COL.COLO4_22994' => 'col', 'COL.COLO4_26389' => 'col', 'COL.COLO4_27170' => 'col', 'COL.COLO4_31074' => 'col', 'COL.COLO4_31465' => 'col', 'COL.COLO4_36438' => 'col', 'COL.COLO4_36439' => 'col', 'Cpa.g.c38781' => 'cpa', 'Cpa.g.sc128.12' => 'cpa', 'Cpa.g.sc166.7' => 'cpa', 'Cpa.g.sc166.8' => 'cpa', 'Cpa.g.sc20.111' => 'cpa', 'Cpa.g.sc27.31' => 'cpa', 'Cpa.g.sc64.36' => 'cpa', 'Cpa.g.sc64.37' => 'cpa', 'Cpa.g.sc66.49' => 'cpa', 'Cpa.g.sc80.64' => 'cpa', 'CsaV3_1G012320' => 'csa', 'CsaV3_2G008480' => 'csa', 'CsaV3_2G033450' => 'csa', 'CsaV3_3G044830' => 'csa', 'CsaV3_4G033710' => 'csa', 'CsaV3_6G051730' => 'csa', 'CsaV3_7G025350' => 'csa', 'CSS0001067' => 'camsi', 'CSS0005996' => 'camsi', 'CSS0006590' => 'camsi', 'CSS0009673' => 'camsi', 'CSS0010201' => 'camsi', 'CSS0010549' => 'camsi', 'CSS0011364' => 'camsi', 'CSS0014473' => 'camsi', 'CSS0014961' => 'camsi', 'CSS0020191' => 'camsi', 'CSS0021165' => 'camsi', 'CSS0022306' => 'camsi', 'CSS0030591' => 'camsi', 'CSS0030696' => 'camsi', 'CSS0032653' => 'camsi', 'CSS0037487' => 'camsi', 'CSS0041102' => 'camsi', 'CSS0041261' => 'camsi', 'CSS0046246' => 'camsi', 'CSS0049256' => 'camsi', 'DCAR_004075' => 'dca', 'DCAR_011538' => 'dca', 'DCAR_019553' => 'dca', 'DCAR_020952' => 'dca', 'DCAR_021739' => 'dca', 'DCAR_027407' => 'dca', 'DCAR_027913' => 'dca', 'DCAR_028066' => 'dca', 'Dinv05899' => 'din', 'Dinv07563' => 'din', 'Dinv08010' => 'din', 'Dinv14125' => 'din', 'Dinv20172' => 'din', 'Dinv30743' => 'din', 'Dinv31229' => 'din', 'Dinv34162' => 'din', 'Dinv36028' => 'din', 'Dinv39368' => 'din', 'Dinv40565' => 'din', 'Dinv41706' => 'din', 'Duzib052G0089' => 'dzi', 'Duzib116G0641' => 'dzi', 'Duzib132G0069' => 'dzi', 'Duzib132G1219' => 'dzi', 'Duzib147G0278' => 'dzi', 'Duzib160G0480' => 'dzi', 'Duzib170G0661' => 'dzi', 'Duzib177G0591' => 'dzi', 'Duzib187G1353' => 'dzi', 'Duzib192G0858' => 'dzi', 'Duzib192G0883' => 'dzi', 'Duzib213G0506' => 'dzi', 'Duzib235G0289' => 'dzi', 'Duzib251G0422' => 'dzi', 'ECA232G3898' => 'eca', 'ECA233G5950' => 'eca', 'ECA234G1699' => 'eca', 'ECA234G2421' => 'eca', 'ECA236G0426' => 'eca', 'ECA236G4331' => 'eca', 'ECA248G2573' => 'eca', 'EL10Ac1g00077' => 'bvu', 'EL10Ac1g01746' => 'bvu', 'EL10Ac2g03464' => 'bvu', 'EL10Ac4g08176' => 'bvu', 'EL10Ac7g17521' => 'bvu', 'EL10Ac8g20386' => 'bvu', 'EL10Ac9g21343' => 'bvu', 'EL10Ac9g22688' => 'bvu', 'Eucgr.B03434' => 'egr', 'Eucgr.D00618' => 'egr', 'Eucgr.E02395' => 'egr', 'Eucgr.F01129' => 'egr', 'Eucgr.F02622' => 'egr', 'Eucgr.F04207' => 'egr', 'FAN01G0570' => 'fan', 'FAN03G3351' => 'fan', 'FAN06G3702' => 'fan', 'FAN07G2149' => 'fan', 'FAN10G3758' => 'fan', 'FAN11G1170' => 'fan', 'FAN11G2050' => 'fan', 'FAN11G2724' => 'fan', 'FAN12G1700' => 'fan', 'FAN12G2028' => 'fan', 'FAN15G1160' => 'fan', 'FAN15G3063' => 'fan', 'FAN16G2540' => 'fan', 'FAN16G3077' => 'fan', 'FAN16G3624' => 'fan', 'FAN17G0221' => 'fan', 'FAN20G2492' => 'fan', 'FAN20G2905' => 'fan', 'FAN21G0548' => 'fan', 'FAN21G1300' => 'fan', 'FAN22G0077' => 'fan', 'FAN22G1315' => 'fan', 'FAN24G1280' => 'fan', 'FAN24G1445' => 'fan', 'FAN24G3527' => 'fan', 'FAN25G0464' => 'fan', 'FAN25G2885' => 'fan', 'FAN25G3270' => 'fan', 'FAN27G1101' => 'fan', 'FAN27G2846' => 'fan', 'FAN27G3524' => 'fan', 'FvH4_2g11770' => 'fve', 'FvH4_2g15630' => 'fve', 'FvH4_3g05570' => 'fve', 'FvH4_3g09110' => 'fve', 'FvH4_3g19940' => 'fve', 'FvH4_4g04821' => 'fve', 'FvH4_4g31480' => 'fve', 'FvH4_7g01740' => 'fve', 'Glyma.05G130400' => 'gma', 'Glyma.05G156400' => 'gma', 'Glyma.07G197000' => 'gma', 'Glyma.08G085151' => 'gma', 'Glyma.08G114500' => 'gma', 'Glyma.08G300400' => 'gma', 'Glyma.10G215800' => 'gma', 'Glyma.12G224400' => 'gma', 'Glyma.13G179300' => 'gma', 'Glyma.13G218151' => 'gma', 'Glyma.13G238800' => 'gma', 'Glyma.13G276900' => 'gma', 'Glyma.14G078200' => 'gma', 'Glyma.15G074500' => 'gma', 'Glyma.15G094100' => 'gma', 'Glyma.17G247200' => 'gma', 'Glyma.18G120100' => 'gma', 'Glyma.20G176000' => 'gma', 'Gohir.A01G063600' => 'ghi', 'Gohir.A01G170301' => 'ghi', 'Gohir.A02G060500' => 'ghi', 'Gohir.A05G133850' => 'ghi', 'Gohir.A05G161400' => 'ghi', 'Gohir.A06G012900' => 'ghi', 'Gohir.A06G035901' => 'ghi', 'Gohir.A06G127100' => 'ghi', 'Gohir.A06G210500' => 'ghi', 'Gohir.A08G008650' => 'ghi', 'Gohir.A09G072700' => 'ghi', 'Gohir.A09G088301' => 'ghi', 'Gohir.A10G040600' => 'ghi', 'Gohir.A12G036300' => 'ghi', 'Gohir.A12G143350' => 'ghi', 'Gohir.A12G165500' => 'ghi', 'Gohir.A13G145700' => 'ghi', 'Gohir.D01G050000' => 'ghi', 'Gohir.D01G051366' => 'ghi', 'Gohir.D01G161350' => 'ghi', 'Gohir.D02G065900' => 'ghi', 'Gohir.D05G164200' => 'ghi', 'Gohir.D05G355500' => 'ghi', 'Gohir.D06G010400' => 'ghi', 'Gohir.D06G111250' => 'ghi', 'Gohir.D06G132000' => 'ghi', 'Gohir.D06G210500' => 'ghi', 'Gohir.D07G165675' => 'ghi', 'Gohir.D08G062240' => 'ghi', 'Gohir.D08G086101' => 'ghi', 'Gohir.D08G138060' => 'ghi', 'Gohir.D09G072300' => 'ghi', 'Gohir.D10G041400' => 'ghi', 'Gohir.D11G191020' => 'ghi', 'Gohir.D11G212066' => 'ghi', 'Gohir.D12G036300' => 'ghi', 'Gohir.D12G168600' => 'ghi', 'Gohir.D13G150600' => 'ghi', 'Gorai.001G057300' => 'gra', 'Gorai.002G069900' => 'gra', 'Gorai.002G200000' => 'gra', 'Gorai.003G067600' => 'gra', 'Gorai.005G074800' => 'gra', 'Gorai.006G087300' => 'gra', 'Gorai.008G037500' => 'gra', 'Gorai.008G181400' => 'gra', 'Gorai.009G169400' => 'gra', 'Gorai.009G387900' => 'gra', 'Gorai.010G013300' => 'gra', 'Gorai.010G153800' => 'gra', 'Gorai.010G255800' => 'gra', 'Gorai.011G043700' => 'gra', 'Gorai.011G198900' => 'gra', 'Gorai.013G168400' => 'gra', 'GSVIVG01005212001' => 'vvi', 'GSVIVG01006163001' => 'vvi', 'GSVIVG01009625001' => 'vvi', 'GSVIVG01014338001' => 'vvi', 'GSVIVG01020005001' => 'vvi', 'GSVIVG01021450001' => 'vvi', 'GSVIVG01023975001' => 'vvi', 'GSVIVG01034490001' => 'vvi', 'HanXRQChr04g0112071' => 'han', 'HanXRQChr05g0131151' => 'han', 'HanXRQChr09g0262371' => 'han', 'HanXRQChr09g0268401' => 'han', 'HanXRQChr10g0279241' => 'han', 'HanXRQChr10g0297961' => 'han', 'HanXRQChr11g0326231' => 'han', 'HanXRQChr11g0328471' => 'han', 'HanXRQChr16g0507941' => 'han', 'HanXRQChr17g0560211' => 'han', 'Haze_02108' => 'cav', 'Haze_02428' => 'cav', 'Haze_05593' => 'cav', 'Haze_06448' => 'cav', 'Haze_09427' => 'cav', 'Haze_12022' => 'cav', 'Haze_17612' => 'cav', 'Haze_17928' => 'cav', 'Hma1.2p1_0032F.1_g019250' => 'hma', 'Hma1.2p1_0163F.1_g072690' => 'hma', 'Hma1.2p1_0265F.1_g106710' => 'hma', 'Hma1.2p1_0286F.1_g113970' => 'hma', 'Hma1.2p1_0363F.1_g136640' => 'hma', 'Hma1.2p1_0584F.1_g183470' => 'hma', 'Hma1.2p1_0885F.1_g232570' => 'hma', 'HPP92_006022' => 'vpl', 'HPP92_007320' => 'vpl', 'HPP92_011521' => 'vpl', 'HPP92_019387' => 'vpl', 'HPP92_024038' => 'vpl', 'Hund05891' => 'sun', 'Hund06450' => 'sun', 'Hund12053' => 'sun', 'Hund16800' => 'sun', 'Hund21222' => 'sun', 'Hund22896' => 'sun', 'Hund23746' => 'sun', 'Hund27083' => 'sun', 'Lalb_Chr02g0141831' => 'lal', 'Lalb_Chr02g0141841' => 'lal', 'Lalb_Chr05g0220411' => 'lal', 'Lalb_Chr06g0162081' => 'lal', 'Lalb_Chr09g0327651' => 'lal', 'Lalb_Chr13g0295051' => 'lal', 'Lalb_Chr15g0086801' => 'lal', 'Lalb_Chr16g0383781' => 'lal', 'Lalb_Chr16g0383791' => 'lal', 'Lalb_Chr18g0055441' => 'lal', 'Lalb_Chr18g0059611' => 'lal', 'Lalb_Chr20g0109661' => 'lal', 'Lalb_Chr20g0109831' => 'lal', 'Lalb_Chr20g0121871' => 'lal', 'Lalb_Chr22g0355361' => 'lal', 'Lalb_Chr25g0286371' => 'lal', 'Lj1A1187G43' => 'lonja', 'Lj1A1205T50' => 'lonja', 'Lj1A800G33' => 'lonja', 'Lj1C1187T7' => 'lonja', 'Lj1C843T11' => 'lonja', 'Lj1g0010940' => 'lja', 'Lj2A288T69' => 'lonja', 'Lj3g0024276' => 'lja', 'Lj4A47T76' => 'lonja', 'Lj4g0005805' => 'lja', 'Lj4g0006097' => 'lja', 'Lj4g0008528' => 'lja', 'Lj4g0024907' => 'lja', 'Lj5g0012472' => 'lja', 'Lj5g0018648' => 'lja', 'Lj6C789G1' => 'lonja', 'Lj6g0004000' => 'lja', 'Lj7A292G67' => 'lonja', 'Lj7A292T64' => 'lonja', 'Lj9A400T58' => 'lonja', 'Lsat_1_v5_gn_1_126181' => 'lsa', 'Lsat_1_v5_gn_4_123041' => 'lsa', 'Lsat_1_v5_gn_4_133620' => 'lsa', 'Lsat_1_v5_gn_4_53221' => 'lsa', 'Lsat_1_v5_gn_4_71961' => 'lsa', 'Lsat_1_v5_gn_7_105241' => 'lsa', 'Lsat_1_v5_gn_7_21361' => 'lsa', 'Lsat_1_v5_gn_7_28860' => 'lsa', 'Lsat_1_v5_gn_7_31260' => 'lsa', 'Lsat_1_v5_gn_8_52801' => 'lsa', 'Manes.02G191400' => 'mes', 'Manes.03G110100' => 'mes', 'Manes.04G071100' => 'mes', 'Manes.05G100500' => 'mes', 'Manes.05G164700' => 'mes', 'Manes.15G087000' => 'mes', 'Manes.15G121500' => 'mes', 'Manes.16G028300' => 'mes', 'Manes.17G046100' => 'mes', 'Manes.17G069800' => 'mes', 'Manes.18G100500' => 'mes', 'Mapoly0002s0109' => 'mpo', 'Mapoly0024s0007' => 'mpo', 'Mapoly0089s0032' => 'mpo', 'MBI04_g42241_MAGBIO' => 'mbi', 'MBI05_g11988_MAGBIO' => 'mbi', 'MBI05_g35452_MAGBIO' => 'mbi', 'MBI07_g30179_MAGBIO' => 'mbi', 'MBI07_g35859_MAGBIO' => 'mbi', 'MBI07_g35860_MAGBIO' => 'mbi', 'MBI07_g37166_MAGBIO' => 'mbi', 'MBI08_g18172_MAGBIO' => 'mbi', 'MBI09_g08441_MAGBIO' => 'mbi', 'MBI13_g01676_MAGBIO' => 'mbi', 'MBI14_g42955_MAGBIO' => 'mbi', 'MBI16_g13161_MAGBIO' => 'mbi', 'MBI17_g27204_MAGBIO' => 'mbi', 'MBI19_g21595_MAGBIO' => 'mbi', 'MD00G1148400' => 'mdo', 'MD02G1301200' => 'mdo', 'MD03G1227800' => 'mdo', 'MD05G1041100' => 'mdo', 'MD05G1124800' => 'mdo', 'MD05G1284000' => 'mdo', 'MD05G1338800' => 'mdo', 'MD05G1338900' => 'mdo', 'MD07G1022800' => 'mdo', 'MD10G1047500' => 'mdo', 'MD10G1127500' => 'mdo', 'MD10G1262300' => 'mdo', 'MD10G1293800' => 'mdo', 'MD16G1074300' => 'mdo', 'Medtr1g021670' => 'mtr', 'Medtr1g096320' => 'mtr', 'Medtr2g013690' => 'mtr', 'Medtr2g019450' => 'mtr', 'Medtr2g085170' => 'mtr', 'Medtr4g088785' => 'mtr', 'Medtr8g055930' => 'mtr', 'Medtr8g085850' => 'mtr', 'MELO3C002605.2' => 'cme', 'MELO3C003891.2' => 'cme', 'MELO3C004012.2' => 'cme', 'MELO3C007134.2' => 'cme', 'MELO3C008118.2' => 'cme', 'MELO3C016700.2' => 'cme', 'MELO3C024127.2' => 'cme', 'MELO3C033361.2' => 'cme', 'MELO3C033362.2' => 'cme', 'Migut.C00430' => 'egut', 'Migut.C01246' => 'egut', 'Migut.E00101' => 'egut', 'Migut.H01486' => 'egut', 'Migut.H01939' => 'egut', 'Migut.K00360' => 'egut', 'Migut.M00910' => 'egut', 'Migut.M01139' => 'egut', 'Migut.N02677' => 'egut', 'MSTRG.13252' => 'ama', 'MSTRG.14701' => 'ama', 'MSTRG.1521' => 'ama', 'MSTRG.15884' => 'ama', 'MSTRG.16242' => 'ama', 'MSTRG.22285' => 'ama', 'MSTRG.22444' => 'ama', 'MSTRG.2349' => 'ama', 'MSTRG.26308' => 'ama', 'MSTRG.28296' => 'ama', 'MSTRG.9895' => 'ama', 'Nitab4.5_0000110g0060' => 'nta', 'Nitab4.5_0000420g0130' => 'nta', 'Nitab4.5_0000422g0030' => 'nta', 'Nitab4.5_0000560g0180' => 'nta', 'Nitab4.5_0000703g0100' => 'nta', 'Nitab4.5_0000786g0200' => 'nta', 'Nitab4.5_0001336g0020' => 'nta', 'Nitab4.5_0001796g0030' => 'nta', 'Nitab4.5_0003348g0060' => 'nta', 'Nitab4.5_0003698g0040' => 'nta', 'Nitab4.5_0003942g0090' => 'nta', 'Nitab4.5_0004775g0070' => 'nta', 'Nitab4.5_0004864g0030' => 'nta', 'Nitab4.5_0005615g0020' => 'nta', 'Nitab4.5_0009288g0030' => 'nta', 'Nitab4.5_0009341g0010' => 'nta', 'Nitab4.5_0009535g0010' => 'nta', 'Nn1g03995' => 'nnu', 'Nn1g04100' => 'nnu', 'Nn1g06530' => 'nnu', 'Nn3g16404' => 'nnu', 'Nn3g17212' => 'nnu', 'Nn3g20776' => 'nnu', 'Nn3g21923' => 'nnu', 'Nn5g27737' => 'nnu', 'Nn5g29461' => 'nnu', 'Nn7g38355' => 'nnu', 'Nn8g39873' => 'nnu', 'Oeu000548.2' => 'oeu', 'Oeu004672.1' => 'oeu', 'Oeu015605.2' => 'oeu', 'Oeu016092.1' => 'oeu', 'Oeu017879.3' => 'oeu', 'Oeu024910.1' => 'oeu', 'Oeu028965.1' => 'oeu', 'Oeu031269.1' => 'oeu', 'Oeu031270.1' => 'oeu', 'Oeu032535.1' => 'oeu', 'Oeu034151.1' => 'oeu', 'Oeu034152.1' => 'oeu', 'Oeu034588.2' => 'oeu', 'Oeu050846.1' => 'oeu', 'Oeu050849.2' => 'oeu', 'Oeu051063.2' => 'oeu', 'Oeu052368.1' => 'oeu', 'Oeu052370.1' => 'oeu', 'Os01g0210400' => 'osa', 'Os01g0304300' => 'osa', 'Os01g0749100' => 'osa', 'Os02g0745800' => 'osa', 'Os03g0769050' => 'osa', 'Os05g0531500' => 'osa', 'Os06g0724300' => 'osa', 'Os11g0198100' => 'osa', 'Peaxi162Scf00069g01425' => 'pax', 'Peaxi162Scf00280g00811' => 'pax', 'Peaxi162Scf00310g00615' => 'pax', 'Peaxi162Scf00362g00542' => 'pax', 'Peaxi162Scf00461g00310' => 'pax', 'Peaxi162Scf00530g00118' => 'pax', 'Peaxi162Scf00541g00057' => 'pax', 'Peaxi162Scf00661g00017' => 'pax', 'Peaxi162Scf00926g00027' => 'pax', 'Peaxi162Scf01064g00263' => 'pax', 'Peaxi162Scf01211g00135' => 'pax', 'PGR004G2336' => 'pgr', 'PGR042G0327' => 'pgr', 'PGR042G1957' => 'pgr', 'PGR042G2003' => 'pgr', 'PGR042G3929' => 'pgr', 'PGR083G1137' => 'pgr', 'PGR083G1364' => 'pgr', 'PGSC0003DMG400003381' => 'stu', 'PGSC0003DMG400003417' => 'stu', 'PGSC0003DMG400008981' => 'stu', 'PGSC0003DMG400012417' => 'stu', 'PGSC0003DMG400012823' => 'stu', 'PGSC0003DMG400016885' => 'stu', 'PGSC0003DMG400022812' => 'stu', 'PGSC0003DMG400029726' => 'stu', 'PGSC0003DMG401009243' => 'stu', 'PGSC0003DMG401031505' => 'stu', 'PGSC0003DMG402031505' => 'stu', 'Phvul.001G017600' => 'pvu', 'Phvul.002G193500' => 'pvu', 'Phvul.002G228900' => 'pvu', 'Phvul.002G236800' => 'pvu', 'Phvul.003G049500' => 'pvu', 'Phvul.005G072000' => 'pvu', 'Phvul.006G164800' => 'pvu', 'Phvul.006G185100' => 'pvu', 'Phvul.007G090000' => 'pvu', 'Potri.001G399800' => 'ptr', 'Potri.002G149900' => 'ptr', 'Potri.004G044100' => 'ptr', 'Potri.004G177600' => 'ptr', 'Potri.009G138000' => 'ptr', 'Potri.010G094000' => 'ptr', 'Potri.011G053000' => 'ptr', 'Potri.011G119300' => 'ptr', 'Potri.013G113700' => 'ptr', 'Potri.018G107800' => 'ptr', 'Potri.019G084100' => 'ptr', 'Pp3c14_23720' => 'ppa', 'Pp3c16_6340' => 'ppa', 'Pp3c23_13420' => 'ppa', 'Pp3c24_2740' => 'ppa', 'Pp3c25_860' => 'ppa', 'Pp3c8_21750' => 'ppa', 'Prupe.1G273000' => 'ppe', 'Prupe.1G273700' => 'ppe', 'Prupe.1G274100' => 'ppe', 'Prupe.2G023300' => 'ppe', 'Prupe.4G048000' => 'ppe', 'Prupe.4G080400' => 'ppe', 'Prupe.4G181200' => 'ppe', 'Prupe.8G056900' => 'ppe', 'Prupe.8G168700' => 'ppe', 'Psat1g189080' => 'psa', 'Psat1g204760' => 'psa', 'Psat4g175560' => 'psa', 'Psat4g177720' => 'psa', 'Psat5g244240' => 'psa', 'Psat6g010720' => 'psa', 'Psat6g187200' => 'psa', 'Psat7g072040' => 'psa', 'PSO017G3501' => 'pso', 'PSO063G2148' => 'pso', 'PSO063G5608' => 'pso', 'PSO210G6392' => 'pso', 'PSO541G2319' => 'pso', 'PSO541G2836' => 'pso', 'PSO541G4012' => 'pso', 'PSO541G6253' => 'pso', 'PSO675G0580' => 'pso', 'PSO675G0856' => 'pso', 'PSO675G5635' => 'pso', 'PSO675G9157' => 'pso', 'PSO832G1660' => 'pso', 'PSO832G1969' => 'pso', 'QL02p007186' => 'qlo', 'QL02p033904' => 'qlo', 'QL03p064391' => 'qlo', 'QL05p040593' => 'qlo', 'QL05p058242' => 'qlo', 'QL08p021825' => 'qlo', 'QL11p004981' => 'qlo', 'RcHm_v2.0_Chr1g0318301' => 'rch', 'RcHm_v2.0_Chr4g0418501' => 'rch', 'RcHm_v2.0_Chr4g0439971' => 'rch', 'RcHm_v2.0_Chr5g0008541' => 'rch', 'RcHm_v2.0_Chr5g0014101' => 'rch', 'RcHm_v2.0_Chr5g0014131' => 'rch', 'RcHm_v2.0_Chr5g0033621' => 'rch', 'RcHm_v2.0_Chr6g0272041' => 'rch', 'RcHm_v2.0_Chr6g0278831' => 'rch', 'Rhsim02G0130400' => 'rsi', 'Rhsim02G0171100' => 'rsi', 'Rhsim05G0053000' => 'rsi', 'Rhsim05G0053100' => 'rsi', 'Rhsim06G0096500' => 'rsi', 'Rhsim06G0096600' => 'rsi', 'Rhsim06G0199100' => 'rsi', 'Rhsim12G0062300' => 'rsi', 'Rhsim12G0062800' => 'rsi', 'Sabra02G0118600' => 'sbr', 'Sabra04G0027300' => 'sbr', 'Sabra04G0119500' => 'sbr', 'Sabra08G0112500' => 'sbr', 'Sabra11G0036800' => 'sbr', 'Sabra11G0103800' => 'sbr', 'Sabra13G0096300' => 'sbr', 'Sabra16G0262300' => 'sbr', 'Sabra18G0091700' => 'sbr', 'Sabra19G0095400' => 'sbr', 'SalBow6G3080' => 'sbo', 'SalBow7G1157' => 'sbo', 'SalBow7G2123' => 'sbo', 'SalBow7G2285' => 'sbo', 'SalBow7G3537' => 'sbo', 'SalBow8G2947' => 'sbo', 'SalBow8G4463' => 'sbo', 'SalBow8G5466' => 'sbo', 'Sc01g0001750' => 'sci', 'Sc02g0006640' => 'sci', 'Sc02g0006670' => 'sci', 'Sc04g0008220' => 'sci', 'Sc05g0006190' => 'sci', 'Sc08g0002760' => 'sci', 'Sc17g0006170' => 'sci', 'Sc22g0002050' => 'sci', 'Sc23g0001190' => 'sci', 'Sc24g0000980' => 'sci', 'Sed0006245' => 'sed', 'Sed0007543' => 'sed', 'Sed0009411' => 'sed', 'Sed0010765' => 'sed', 'Sed0012944' => 'sed', 'Sed0014682' => 'sed', 'Sed0016174' => 'sed', 'Sed0016796' => 'sed', 'Sed0020317' => 'sed', 'Sed0021467' => 'sed', 'SEGI_01316' => 'sgi', 'SEGI_03374' => 'sgi', 'SEGI_16265' => 'sgi', 'SEGI_18569' => 'sgi', 'SEGI_20351' => 'sgi', 'SEGI_26395' => 'sgi', 'SEGI_29469' => 'sgi', 'SEGI_34771' => 'sgi', 'SEGI_36769' => 'sgi', 'SEGI_37139' => 'sgi', 'SGA_v2.0_scaffold100G29687' => 'sas', 'SGA_v2.0_scaffold118G32472' => 'sas', 'SGA_v2.0_scaffold14G07051' => 'sas', 'SGA_v2.0_scaffold183G39845' => 'sas', 'SGA_v2.0_scaffold1G00174' => 'sas', 'SGA_v2.0_scaffold22G09714' => 'sas', 'SGA_v2.0_scaffold333G48992' => 'sas', 'SGA_v2.0_scaffold46G17491' => 'sas', 'SGA_v2.0_scaffold49G18294' => 'sas', 'SGA_v2.0_scaffold63G21658' => 'sas', 'SHI01741' => 'shi', 'SHI05771' => 'shi', 'SHI18077' => 'shi', 'SHI20525' => 'shi', 'SHI20527' => 'shi', 'SHI20528' => 'shi', 'SMO172G0185' => 'smo', 'SMO198G0020' => 'smo', 'SMO351G0006' => 'smo', 'SMO356G0118' => 'smo', 'SMO358G0296' => 'smo', 'SMO367G0079' => 'smo', 'SMO367G1277' => 'smo', 'Solyc01g014220.3' => 'sly', 'Solyc01g111770.2' => 'sly', 'Solyc02g078180.3' => 'sly', 'Solyc03g006430.3' => 'sly', 'Solyc03g006456.1' => 'sly', 'Solyc03g079860.2' => 'sly', 'Solyc04g079770.3' => 'sly', 'Solyc05g007430.4' => 'sly', 'Solyc07g063150.3' => 'sly', 'Solyc08g016620.3' => 'sly', 'Solyc09g057590.3' => 'sly', 'Solyc09g057600.1' => 'sly', 'Solyc10g009050.3' => 'sly', 'Solyc11g017420.2' => 'sly', 'Sopen01g053810' => 'spe', 'Sopen02g023040' => 'spe', 'Sopen03g002440' => 'spe', 'Sopen04g033350' => 'spe', 'Sopen05g003310' => 'spe', 'Sopen07g004050' => 'spe', 'Sopen07g031340' => 'spe', 'Sopen08g006990' => 'spe', 'Sopen10g004830' => 'spe', 'Sopen11g009370' => 'spe', 'Sp1g24450' => 'spa', 'Sp1g29670' => 'spa', 'Sp1g39600' => 'spa', 'Sp2g11080' => 'spa', 'Sp2g13970' => 'spa', 'Sp4g16130' => 'spa', 'Sp6g13080' => 'spa', 'Sp7g37270' => 'spa', 'TAR371G0065' => 'tar', 'TAR376G0340' => 'tar', 'TAR376G0435' => 'tar', 'TAR381G0002' => 'tar', 'TAR381G1236' => 'tar', 'TAR624G0055' => 'tar', 'TAR624G0324' => 'tar', 'TAR624G0696' => 'tar', 'TAR624G0906' => 'tar', 'TAR625G0107' => 'tar', 'TAR626G0015' => 'tar', 'TAR626G1356' => 'tar', 'TAR627G0888' => 'tar', 'TAR628G0399' => 'tar', 'TAR628G1327' => 'tar', 'TAR629G2831' => 'tar', 'TAR629G2874' => 'tar', 'TAR633G1432' => 'tar', 'TAR633G2771' => 'tar', 'THA.LOC104803394' => 'tha', 'THA.LOC104805153' => 'tha', 'THA.LOC104806784' => 'tha', 'THA.LOC104810473' => 'tha', 'THA.LOC104813100' => 'tha', 'THA.LOC104814215' => 'tha', 'THA.LOC104815554' => 'tha', 'THA.LOC104820544' => 'tha', 'THA.LOC104824754' => 'tha', 'THA.LOC104827717' => 'tha', 'Thecc.02G031400' => 'tca', 'Thecc.02G055900' => 'tca', 'Thecc.02G350800' => 'tca', 'Thecc.06G150900' => 'tca', 'Thecc.06G186600' => 'tca', 'Thecc.07G089600' => 'tca', 'Thecc.08G020400' => 'tca', 'Thecc.08G182100' => 'tca', 'Thhalv10000873m.g' => 'esa', 'Thhalv10004185m.g' => 'esa', 'Thhalv10006981m.g' => 'esa', 'Thhalv10007204m.g' => 'esa', 'Thhalv10011374m.g' => 'esa', 'Thhalv10013482m.g' => 'esa', 'Thhalv10017801m.g' => 'esa', 'Thhalv10024983m.g' => 'esa', 'TPR.G12072' => 'tpr', 'TPR.G15769' => 'tpr', 'TPR.G16504' => 'tpr', 'TPR.G16506' => 'tpr', 'TPR.G24345' => 'tpr', 'TPR.G26666' => 'tpr', 'TPR.G27320' => 'tpr', 'TPR.G31819' => 'tpr', 'TPR.G38879' => 'tpr', 'TPR.G39015' => 'tpr', 'TPR.G8819' => 'tpr', 'TWI09G0924' => 'twi', 'TWI12G0811' => 'twi', 'TWI12G1294' => 'twi', 'TWI31G0150' => 'twi', 'TWI36G1262' => 'twi', 'TWI38G1287' => 'twi', 'TWI38G1633' => 'twi', 'TWI38G1982' => 'twi', 'TWI39G0116' => 'twi', 'TWI60G1011' => 'twi', 'TWI63G0171' => 'twi', 'TWI73G0839' => 'twi', 'TWI79G1511' => 'twi', 'unitig_0.g915' => 'ugi', 'unitig_0.g916' => 'ugi', 'unitig_21.g20219' => 'ugi', 'unitig_21.g20416' => 'ugi', 'unitig_578.g16132' => 'ugi', 'unitig_578.g16718' => 'ugi', 'unitig_62.g23481' => 'ugi', 'unitig_744.g24535' => 'ugi', 'unitig_749.g13525' => 'ugi', 'vmacro01248' => 'vma', 'vmacro02290' => 'vma', 'vmacro10946' => 'vma', 'vmacro11865' => 'vma', 'vmacro12493' => 'vma', 'vmacro17322' => 'vma', 'vmacro21599' => 'vma', 'vmacro23041' => 'vma', 'VMungo0251G0004' => 'vmu', 'VMungo0251G2639' => 'vmu', 'VMungo0251G2967' => 'vmu', 'VMungo0540G0864' => 'vmu', 'VMungo0540G1569' => 'vmu', 'VMungo0647G0317' => 'vmu', 'VMungo0720G1373' => 'vmu', 'VMungo0720G1508' => 'vmu', 'VMungo1080G0485' => 'vmu', 'VMungo1215G3177' => 'vmu', 'Zm00001eb112600' => 'zma', 'Zm00001eb120220' => 'zma', 'Zm00001eb153240' => 'zma', 'Zm00001eb168880' => 'zma', 'Zm00001eb213920' => 'zma', 'Zm00001eb228280' => 'zma', 'Zm00001eb254580' => 'zma', 'Zm00001eb272180' => 'zma', 'Zm00001eb293190' => 'zma', 'Zm00001eb322930' => 'zma', 'Zm00001eb353360' => 'zma', 'Zm00001eb353390' => 'zma', 'Zm00001eb353430' => 'zma', 'Zm00001eb353440' => 'zma', 'Zm00001eb353780' => 'zma' ) $gf_id = 'HOM05D000499' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000499' ) $data_identifier = 'HOM05D000499' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 29, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 12, 'amhyb' => (int) 8, 'aly' => (int) 12, 'aox' => (int) 9, 'arhy' => (int) 26, 'ath' => (int) 8, 'atr' => (int) 7, 'acertr' => (int) 10, 'cqu' => (int) 15, 'bca' => (int) 29, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 11, 'cansat' => (int) 8, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 9, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 8, 'cpa' => (int) 10, 'csa' => (int) 7, 'camsi' => (int) 20, 'dca' => (int) 8, 'din' => (int) 12, 'dzi' => (int) 14, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 6, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 38, 'gra' => (int) 16, 'vvi' => (int) 8, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 5, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 11, 'lja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 11, 'mpo' => (int) 3, 'mbi' => (int) 14, 'mdo' => (int) 14, 'mtr' => (int) 8, 'cme' => (int) 9, 'egut' => (int) 9, 'ama' => (int) 11, 'nta' => (int) 17, 'nnu' => (int) 11, 'oeu' => (int) 18, 'osa' => (int) 8, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 6, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 9, 'rsi' => (int) 9, 'sbr' => (int) 10, 'sbo' => (int) 8, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 10, 'sas' => (int) 10, 'shi' => (int) 6, 'smo' => (int) 7, 'sly' => (int) 14, 'spe' => (int) 10, 'spa' => (int) 8, 'tar' => (int) 19, 'tha' => (int) 10, 'tca' => (int) 8, 'esa' => (int) 8, 'tpr' => (int) 11, 'twi' => (int) 13, 'ugi' => (int) 9, 'vma' => (int) 8, 'vmu' => (int) 10, 'zma' => (int) 15 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb353780' $species_info = array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ) $local_species = 'cansat' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000499', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1066', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p29780' => 'bna', 'A02p33180' => 'bna', 'A03p16470' => 'bna', 'A03p66010' => 'bna', 'A04p25970' => 'bna', 'A06p01270' => 'bna', 'A06p46080' => 'bna', 'A07p11400' => 'bna', 'A08p01840' => 'bna', 'A08p08230' => 'bna', 'A08p25740' => 'bna', 'A09p32070' => 'bna', 'A09p37830' => 'bna', 'A09p42840' => 'bna', 'A09p42850' => 'bna', 'Aa31LG10G2060' => 'aar', 'Aa31LG2G7410' => 'aar', 'Aa31LG6G10200' => 'aar', 'Aa31LG6G16680' => 'aar', 'Aa31LG6G8470' => 'aar', 'Aa31LG9G12730' => 'aar', 'Aa31LG9G13680' => 'aar', 'Aa31LG9G14920' => 'aar', 'Aa31LG9G6650' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4977' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5467' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3254' => 'aag', 'Actinidia02578' => 'ach', 'Actinidia07693' => 'ach', 'Actinidia08413' => 'ach', 'Actinidia08414' => 'ach', 'Actinidia15289' => 'ach', 'Actinidia19871' => 'ach', 'Actinidia21475' => 'ach', 'Actinidia22576' => 'ach', 'Actinidia28327' => 'ach', 'Actinidia32491' => 'ach', 'Actinidia39463' => 'ach', 'Actinidia39571' => 'ach', 'Ah.01g013750' => 'amhyb', 'Ah.01g023210' => 'amhyb', 'Ah.04g164850' => 'amhyb', 'Ah.05g178060' => 'amhyb', 'Ah.07g204270' => 'amhyb', 'Ah.07g208480' => 'amhyb', 'Ah.09g237410' => 'amhyb', 'Ah.14g089460' => 'amhyb', 'AL1G41790' => 'aly', 'AL1G49050' => 'aly', 'AL1G53810' => 'aly', 'AL1G61400' => 'aly', 'AL4G18580' => 'aly', 'AL5G12510' => 'aly', 'AL5G12540' => 'aly', 'AL6G43230' => 'aly', 'AL7G10370' => 'aly', 'AL7G19250' => 'aly', 'AL8G12240' => 'aly', 'AL8G18540' => 'aly', 'Aqoxy1G02409' => 'aox', 'Aqoxy2G03993' => 'aox', 'Aqoxy3G03357' => 'aox', 'Aqoxy4G00785' => 'aox', 'Aqoxy5G02598' => 'aox', 'Aqoxy6G00132' => 'aox', 'Aqoxy7G01776' => 'aox', 'Aqoxy7G02316' => 'aox', 'Aqoxy7G03973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.12AFKW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B8730' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27IQR1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3F75VG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3RE0GA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41TCQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.527VTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FIR39' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5W8UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DA38EV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ63HS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H1I32C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HC27T5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4M8AP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7N3CZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9UVDZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LS1NQA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT1D4B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SKC4TM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCFV76' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF9Q1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQWD9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1ZM88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WE07RT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YCK7VH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJE6Q6' => 'arhy', 'AT1G28240' => 'ath', 'AT1G34550' => 'ath', 'AT1G53040' => 'ath', 'AT2G02910' => 'ath', 'AT4G09630' => 'ath', 'AT4G38500' => 'ath', 'AT5G42660' => 'ath', 'AT5G46220' => 'ath', 'ATR0152G026' => 'atr', 'ATR0564G343' => 'atr', 'ATR0706G151' => 'atr', 'ATR0733G207' => 'atr', 'ATR0751G234' => 'atr', 'ATR0807G048' => 'atr', 'ATR1091G084' => 'atr', 'Atru.chr10.1229' => 'acertr', 'Atru.chr10.1230' => 'acertr', 'Atru.chr10.1874' => 'acertr', 'Atru.chr11.1808' => 'acertr', 'Atru.chr13.1795' => 'acertr', 'Atru.chr13.570' => 'acertr', 'Atru.chr2.2608' => 'acertr', 'Atru.chr2.2609' => 'acertr', 'Atru.chr5.3428' => 'acertr', 'Atru.chr8.1171' => 'acertr', 'AUR62004651' => 'cqu', 'AUR62008675' => 'cqu', 'AUR62010014' => 'cqu', 'AUR62013004' => 'cqu', 'AUR62014825' => 'cqu', 'AUR62015015' => 'cqu', 'AUR62015151' => 'cqu', 'AUR62017020' => 'cqu', 'AUR62019422' => 'cqu', 'AUR62023570' => 'cqu', 'AUR62025571' => 'cqu', 'AUR62029098' => 'cqu', 'AUR62033863' => 'cqu', 'AUR62034296' => 'cqu', 'AUR62040075' => 'cqu', 'BcaB02g07334' => 'bca', 'BcaB02g10575' => 'bca', 'BcaB03g12119' => 'bca', 'BcaB03g12120' => 'bca', 'BcaB03g13945' => 'bca', 'BcaB04g17123' => 'bca', 'BcaB04g17867' => 'bca', 'BcaB04g19839' => 'bca', 'BcaB07g30317' => 'bca', 'BcaB07g32432' => 'bca', 'BcaB07g33362' => 'bca', 'BcaB08g36611' => 'bca', 'BcaC01g00028' => 'bca', 'BcaC01g01356' => 'bca', 'BcaC01g02034' => 'bca', 'BcaC01g06051' => 'bca', 'BcaC03g16839' => 'bca', 'BcaC03g17176' => 'bca', 'BcaC05g26829' => 'bca', 'BcaC06g31490' => 'bca', 'BcaC06g35344' => 'bca', 'BcaC06g36570' => 'bca', 'BcaC07g37537' => 'bca', 'BcaC08g43491' => 'bca', 'BcaC08g43773' => 'bca', 'BcaNung00234' => 'bca', 'BcaNung01982' => 'bca', 'BcaNung03707' => 'bca', 'BcaNung06454' => 'bca', 'BolC2t10762H' => 'bol', 'BolC2t11191H' => 'bol', 'BolC3t14322H' => 'bol', 'BolC3t19747H' => 'bol', 'BolC3t21425H' => 'bol', 'BolC4t27800H' => 'bol', 'BolC5t31423H' => 'bol', 'BolC6t35951H' => 'bol', 'BolC6t36282H' => 'bol', 'BolC7t40678H' => 'bol', 'BolC7t40679H' => 'bol', 'BolC7t42222H' => 'bol', 'BolC7t43492H' => 'bol', 'BolC7t46785H' => 'bol', 'BolC8t47853H' => 'bol', 'BolC9t56805H' => 'bol', 'BraA02t08000Z' => 'bra', 'BraA02t08341Z' => 'bra', 'BraA03t10936Z' => 'bra', 'BraA03t15657Z' => 'bra', 'BraA04t18100Z' => 'bra', 'BraA05t20523Z' => 'bra', 'BraA06t23353Z' => 'bra', 'BraA06t27473Z' => 'bra', 'BraA06t27769Z' => 'bra', 'BraA07t28928Z' => 'bra', 'BraA08t32236Z' => 'bra', 'BraA08t32841Z' => 'bra', 'BraA08t34524Z' => 'bra', 'BraA09t38742Z' => 'bra', 'BraA09t39295Z' => 'bra', 'C02p47180' => 'bna', 'C02p50990' => 'bna', 'C03p19360' => 'bna', 'C03p74950' => 'bna', 'C03p91000' => 'bna', 'C04p63260' => 'bna', 'C05p27050' => 'bna', 'C06p08750' => 'bna', 'C06p11490' => 'bna', 'C07p02820' => 'bna', 'C07p17180' => 'bna', 'C07p29440' => 'bna', 'C07p63730' => 'bna', 'C09p39260' => 'bna', 'CAN.G1164.34' => 'can', 'CAN.G1164.39' => 'can', 'CAN.G1530.3' => 'can', 'CAN.G162.61' => 'can', 'CAN.G176.6' => 'can', 'CAN.G289.49' => 'can', 'CAN.G370.21' => 'can', 'CAN.G370.22' => 'can', 'CAN.G371.117' => 'can', 'CAN.G58.37' => 'can', 'CAN.G588.98' => 'can', 'CANSAT21G2266' => 'cansat', 'CANSAT25G2799' => 'cansat', 'CANSAT35G0862' => 'cansat', 'CANSAT35G1704' => 'cansat', 'CANSAT35G1760' => 'cansat', 'CANSAT56G3971' => 'cansat', 'CANSAT56G4116' => 'cansat', 'CANSAT80G1259' => 'cansat', 'CARHR027730' => 'chi', 'CARHR033880' => 'chi', 'CARHR043270' => 'chi', 'CARHR145330' => 'chi', 'CARHR145340' => 'chi', 'CARHR175570' => 'chi', 'CARHR181570' => 'chi', 'CARHR258470' => 'chi', 'CARHR260490' => 'chi', 'CARHR294220' => 'chi', 'Carub.0001s2668' => 'cru', 'Carub.0001s3257' => 'cru', 'Carub.0001s4220' => 'cru', 'Carub.0005s0179' => 'cru', 'Carub.0006s2807' => 'cru', 'Carub.0007s0039' => 'cru', 'Carub.0008s0169' => 'cru', 'Carub.0008s0636' => 'cru', 'Ca_00338_v3' => 'car', 'Ca_00542_v3' => 'car', 'Ca_01844_v3' => 'car', 'Ca_10611_v3' => 'car', 'Ca_13326_v3' => 'car', 'Ca_17944_v3' => 'car', 'Ca_18546_v3' => 'car', 'Ca_24219_v3' => 'car', 'Ca_29972_v3' => 'car', 'CBR_g3681' => 'cbr', 'CBR_g40021' => 'cbr', 'Cc01_g08140' => 'ccan', 'Cc02_g13410' => 'ccan', 'Cc02_g37480' => 'ccan', 'Cc05_g12030' => 'ccan', 'Cc09_g03370' => 'ccan', 'Cc09_g10300' => 'ccan', 'Cc10_g03530' => 'ccan', 'Cc10_g11380' => 'ccan', 'CDE01G0176' => 'cde', 'CDE02G0675' => 'cde', 'CDE02G0942' => 'cde', 'CDE02G1153' => 'cde', 'CDE02G4177' => 'cde', 'CDE04G2117' => 'cde', 'CDE04G2736' => 'cde', 'CDE08G1161' => 'cde', 'CDE09G1238' => 'cde', 'Cfa000467' => 'cfa', 'Cfa000947' => 'cfa', 'Cfa004969' => 'cfa', 'Cfa005284' => 'cfa', 'Cfa008993' => 'cfa', 'Cfa018187' => 'cfa', 'Cfa018454' => 'cfa', 'Cfa020585' => 'cfa', 'Ciclev10000424m.g' => 'ccl', 'Ciclev10003605m.g' => 'ccl', 'Ciclev10007828m.g' => 'ccl', 'Ciclev10014620m.g' => 'ccl', 'Ciclev10015169m.g' => 'ccl', 'Ciclev10018291m.g' => 'ccl', 'Ciclev10028256m.g' => 'ccl', 'Ciclev10033822m.g' => 'ccl', 'CiPaw.05G060300' => 'cil', 'CiPaw.05G085000' => 'cil', 'CiPaw.06G083700' => 'cil', 'CiPaw.06G120300' => 'cil', 'CiPaw.09G060500' => 'cil', 'CiPaw.09G123800' => 'cil', 'CiPaw.11G169700' => 'cil', 'CiPaw.12G118300' => 'cil', 'CiPaw.15G071000' => 'cil', 'CiPaw.15G081900' => 'cil', 'ClCG01G024610' => 'cla', 'ClCG03G006070' => 'cla', 'ClCG05G019250' => 'cla', 'ClCG09G009500' => 'cla', 'ClCG11G008200' => 'cla', 'ClCG11G018080' => 'cla', 'COL.COLO4_17373' => 'col', 'COL.COLO4_22994' => 'col', 'COL.COLO4_26389' => 'col', 'COL.COLO4_27170' => 'col', 'COL.COLO4_31074' => 'col', 'COL.COLO4_31465' => 'col', 'COL.COLO4_36438' => 'col', 'COL.COLO4_36439' => 'col', 'Cpa.g.c38781' => 'cpa', 'Cpa.g.sc128.12' => 'cpa', 'Cpa.g.sc166.7' => 'cpa', 'Cpa.g.sc166.8' => 'cpa', 'Cpa.g.sc20.111' => 'cpa', 'Cpa.g.sc27.31' => 'cpa', 'Cpa.g.sc64.36' => 'cpa', 'Cpa.g.sc64.37' => 'cpa', 'Cpa.g.sc66.49' => 'cpa', 'Cpa.g.sc80.64' => 'cpa', 'CsaV3_1G012320' => 'csa', 'CsaV3_2G008480' => 'csa', 'CsaV3_2G033450' => 'csa', 'CsaV3_3G044830' => 'csa', 'CsaV3_4G033710' => 'csa', 'CsaV3_6G051730' => 'csa', 'CsaV3_7G025350' => 'csa', 'CSS0001067' => 'camsi', 'CSS0005996' => 'camsi', 'CSS0006590' => 'camsi', 'CSS0009673' => 'camsi', 'CSS0010201' => 'camsi', 'CSS0010549' => 'camsi', 'CSS0011364' => 'camsi', 'CSS0014473' => 'camsi', 'CSS0014961' => 'camsi', 'CSS0020191' => 'camsi', 'CSS0021165' => 'camsi', 'CSS0022306' => 'camsi', 'CSS0030591' => 'camsi', 'CSS0030696' => 'camsi', 'CSS0032653' => 'camsi', 'CSS0037487' => 'camsi', 'CSS0041102' => 'camsi', 'CSS0041261' => 'camsi', 'CSS0046246' => 'camsi', 'CSS0049256' => 'camsi', 'DCAR_004075' => 'dca', 'DCAR_011538' => 'dca', 'DCAR_019553' => 'dca', 'DCAR_020952' => 'dca', 'DCAR_021739' => 'dca', 'DCAR_027407' => 'dca', 'DCAR_027913' => 'dca', 'DCAR_028066' => 'dca', 'Dinv05899' => 'din', 'Dinv07563' => 'din', 'Dinv08010' => 'din', 'Dinv14125' => 'din', 'Dinv20172' => 'din', 'Dinv30743' => 'din', 'Dinv31229' => 'din', 'Dinv34162' => 'din', 'Dinv36028' => 'din', 'Dinv39368' => 'din', 'Dinv40565' => 'din', 'Dinv41706' => 'din', 'Duzib052G0089' => 'dzi', 'Duzib116G0641' => 'dzi', 'Duzib132G0069' => 'dzi', 'Duzib132G1219' => 'dzi', 'Duzib147G0278' => 'dzi', 'Duzib160G0480' => 'dzi', 'Duzib170G0661' => 'dzi', 'Duzib177G0591' => 'dzi', 'Duzib187G1353' => 'dzi', 'Duzib192G0858' => 'dzi', 'Duzib192G0883' => 'dzi', 'Duzib213G0506' => 'dzi', 'Duzib235G0289' => 'dzi', 'Duzib251G0422' => 'dzi', 'ECA232G3898' => 'eca', 'ECA233G5950' => 'eca', 'ECA234G1699' => 'eca', 'ECA234G2421' => 'eca', 'ECA236G0426' => 'eca', 'ECA236G4331' => 'eca', 'ECA248G2573' => 'eca', 'EL10Ac1g00077' => 'bvu', 'EL10Ac1g01746' => 'bvu', 'EL10Ac2g03464' => 'bvu', 'EL10Ac4g08176' => 'bvu', 'EL10Ac7g17521' => 'bvu', 'EL10Ac8g20386' => 'bvu', 'EL10Ac9g21343' => 'bvu', 'EL10Ac9g22688' => 'bvu', 'Eucgr.B03434' => 'egr', 'Eucgr.D00618' => 'egr', 'Eucgr.E02395' => 'egr', 'Eucgr.F01129' => 'egr', 'Eucgr.F02622' => 'egr', 'Eucgr.F04207' => 'egr', 'FAN01G0570' => 'fan', 'FAN03G3351' => 'fan', 'FAN06G3702' => 'fan', 'FAN07G2149' => 'fan', 'FAN10G3758' => 'fan', 'FAN11G1170' => 'fan', 'FAN11G2050' => 'fan', 'FAN11G2724' => 'fan', 'FAN12G1700' => 'fan', 'FAN12G2028' => 'fan', 'FAN15G1160' => 'fan', 'FAN15G3063' => 'fan', 'FAN16G2540' => 'fan', 'FAN16G3077' => 'fan', 'FAN16G3624' => 'fan', 'FAN17G0221' => 'fan', 'FAN20G2492' => 'fan', 'FAN20G2905' => 'fan', 'FAN21G0548' => 'fan', 'FAN21G1300' => 'fan', 'FAN22G0077' => 'fan', 'FAN22G1315' => 'fan', 'FAN24G1280' => 'fan', 'FAN24G1445' => 'fan', 'FAN24G3527' => 'fan', 'FAN25G0464' => 'fan', 'FAN25G2885' => 'fan', 'FAN25G3270' => 'fan', 'FAN27G1101' => 'fan', 'FAN27G2846' => 'fan', 'FAN27G3524' => 'fan', 'FvH4_2g11770' => 'fve', 'FvH4_2g15630' => 'fve', 'FvH4_3g05570' => 'fve', 'FvH4_3g09110' => 'fve', 'FvH4_3g19940' => 'fve', 'FvH4_4g04821' => 'fve', 'FvH4_4g31480' => 'fve', 'FvH4_7g01740' => 'fve', 'Glyma.05G130400' => 'gma', 'Glyma.05G156400' => 'gma', 'Glyma.07G197000' => 'gma', 'Glyma.08G085151' => 'gma', 'Glyma.08G114500' => 'gma', 'Glyma.08G300400' => 'gma', 'Glyma.10G215800' => 'gma', 'Glyma.12G224400' => 'gma', 'Glyma.13G179300' => 'gma', 'Glyma.13G218151' => 'gma', 'Glyma.13G238800' => 'gma', 'Glyma.13G276900' => 'gma', 'Glyma.14G078200' => 'gma', 'Glyma.15G074500' => 'gma', 'Glyma.15G094100' => 'gma', 'Glyma.17G247200' => 'gma', 'Glyma.18G120100' => 'gma', 'Glyma.20G176000' => 'gma', 'Gohir.A01G063600' => 'ghi', 'Gohir.A01G170301' => 'ghi', 'Gohir.A02G060500' => 'ghi', 'Gohir.A05G133850' => 'ghi', 'Gohir.A05G161400' => 'ghi', 'Gohir.A06G012900' => 'ghi', 'Gohir.A06G035901' => 'ghi', 'Gohir.A06G127100' => 'ghi', 'Gohir.A06G210500' => 'ghi', 'Gohir.A08G008650' => 'ghi', 'Gohir.A09G072700' => 'ghi', 'Gohir.A09G088301' => 'ghi', 'Gohir.A10G040600' => 'ghi', 'Gohir.A12G036300' => 'ghi', 'Gohir.A12G143350' => 'ghi', 'Gohir.A12G165500' => 'ghi', 'Gohir.A13G145700' => 'ghi', 'Gohir.D01G050000' => 'ghi', 'Gohir.D01G051366' => 'ghi', 'Gohir.D01G161350' => 'ghi', 'Gohir.D02G065900' => 'ghi', 'Gohir.D05G164200' => 'ghi', 'Gohir.D05G355500' => 'ghi', 'Gohir.D06G010400' => 'ghi', 'Gohir.D06G111250' => 'ghi', 'Gohir.D06G132000' => 'ghi', 'Gohir.D06G210500' => 'ghi', 'Gohir.D07G165675' => 'ghi', 'Gohir.D08G062240' => 'ghi', 'Gohir.D08G086101' => 'ghi', 'Gohir.D08G138060' => 'ghi', 'Gohir.D09G072300' => 'ghi', 'Gohir.D10G041400' => 'ghi', 'Gohir.D11G191020' => 'ghi', 'Gohir.D11G212066' => 'ghi', 'Gohir.D12G036300' => 'ghi', 'Gohir.D12G168600' => 'ghi', 'Gohir.D13G150600' => 'ghi', 'Gorai.001G057300' => 'gra', 'Gorai.002G069900' => 'gra', 'Gorai.002G200000' => 'gra', 'Gorai.003G067600' => 'gra', 'Gorai.005G074800' => 'gra', 'Gorai.006G087300' => 'gra', 'Gorai.008G037500' => 'gra', 'Gorai.008G181400' => 'gra', 'Gorai.009G169400' => 'gra', 'Gorai.009G387900' => 'gra', 'Gorai.010G013300' => 'gra', 'Gorai.010G153800' => 'gra', 'Gorai.010G255800' => 'gra', 'Gorai.011G043700' => 'gra', 'Gorai.011G198900' => 'gra', 'Gorai.013G168400' => 'gra', 'GSVIVG01005212001' => 'vvi', 'GSVIVG01006163001' => 'vvi', 'GSVIVG01009625001' => 'vvi', 'GSVIVG01014338001' => 'vvi', 'GSVIVG01020005001' => 'vvi', 'GSVIVG01021450001' => 'vvi', 'GSVIVG01023975001' => 'vvi', 'GSVIVG01034490001' => 'vvi', 'HanXRQChr04g0112071' => 'han', 'HanXRQChr05g0131151' => 'han', 'HanXRQChr09g0262371' => 'han', 'HanXRQChr09g0268401' => 'han', 'HanXRQChr10g0279241' => 'han', 'HanXRQChr10g0297961' => 'han', 'HanXRQChr11g0326231' => 'han', 'HanXRQChr11g0328471' => 'han', 'HanXRQChr16g0507941' => 'han', 'HanXRQChr17g0560211' => 'han', 'Haze_02108' => 'cav', 'Haze_02428' => 'cav', 'Haze_05593' => 'cav', 'Haze_06448' => 'cav', 'Haze_09427' => 'cav', 'Haze_12022' => 'cav', 'Haze_17612' => 'cav', 'Haze_17928' => 'cav', 'Hma1.2p1_0032F.1_g019250' => 'hma', 'Hma1.2p1_0163F.1_g072690' => 'hma', 'Hma1.2p1_0265F.1_g106710' => 'hma', 'Hma1.2p1_0286F.1_g113970' => 'hma', 'Hma1.2p1_0363F.1_g136640' => 'hma', 'Hma1.2p1_0584F.1_g183470' => 'hma', 'Hma1.2p1_0885F.1_g232570' => 'hma', 'HPP92_006022' => 'vpl', 'HPP92_007320' => 'vpl', 'HPP92_011521' => 'vpl', 'HPP92_019387' => 'vpl', 'HPP92_024038' => 'vpl', 'Hund05891' => 'sun', 'Hund06450' => 'sun', 'Hund12053' => 'sun', 'Hund16800' => 'sun', 'Hund21222' => 'sun', 'Hund22896' => 'sun', 'Hund23746' => 'sun', 'Hund27083' => 'sun', 'Lalb_Chr02g0141831' => 'lal', 'Lalb_Chr02g0141841' => 'lal', 'Lalb_Chr05g0220411' => 'lal', 'Lalb_Chr06g0162081' => 'lal', 'Lalb_Chr09g0327651' => 'lal', 'Lalb_Chr13g0295051' => 'lal', 'Lalb_Chr15g0086801' => 'lal', 'Lalb_Chr16g0383781' => 'lal', 'Lalb_Chr16g0383791' => 'lal', 'Lalb_Chr18g0055441' => 'lal', 'Lalb_Chr18g0059611' => 'lal', 'Lalb_Chr20g0109661' => 'lal', 'Lalb_Chr20g0109831' => 'lal', 'Lalb_Chr20g0121871' => 'lal', 'Lalb_Chr22g0355361' => 'lal', 'Lalb_Chr25g0286371' => 'lal', 'Lj1A1187G43' => 'lonja', 'Lj1A1205T50' => 'lonja', 'Lj1A800G33' => 'lonja', 'Lj1C1187T7' => 'lonja', 'Lj1C843T11' => 'lonja', 'Lj1g0010940' => 'lja', 'Lj2A288T69' => 'lonja', 'Lj3g0024276' => 'lja', 'Lj4A47T76' => 'lonja', 'Lj4g0005805' => 'lja', 'Lj4g0006097' => 'lja', 'Lj4g0008528' => 'lja', 'Lj4g0024907' => 'lja', 'Lj5g0012472' => 'lja', 'Lj5g0018648' => 'lja', 'Lj6C789G1' => 'lonja', 'Lj6g0004000' => 'lja', 'Lj7A292G67' => 'lonja', 'Lj7A292T64' => 'lonja', 'Lj9A400T58' => 'lonja', 'Lsat_1_v5_gn_1_126181' => 'lsa', 'Lsat_1_v5_gn_4_123041' => 'lsa', 'Lsat_1_v5_gn_4_133620' => 'lsa', 'Lsat_1_v5_gn_4_53221' => 'lsa', 'Lsat_1_v5_gn_4_71961' => 'lsa', 'Lsat_1_v5_gn_7_105241' => 'lsa', 'Lsat_1_v5_gn_7_21361' => 'lsa', 'Lsat_1_v5_gn_7_28860' => 'lsa', 'Lsat_1_v5_gn_7_31260' => 'lsa', 'Lsat_1_v5_gn_8_52801' => 'lsa', 'Manes.02G191400' => 'mes', 'Manes.03G110100' => 'mes', 'Manes.04G071100' => 'mes', 'Manes.05G100500' => 'mes', 'Manes.05G164700' => 'mes', 'Manes.15G087000' => 'mes', 'Manes.15G121500' => 'mes', 'Manes.16G028300' => 'mes', 'Manes.17G046100' => 'mes', 'Manes.17G069800' => 'mes', 'Manes.18G100500' => 'mes', 'Mapoly0002s0109' => 'mpo', 'Mapoly0024s0007' => 'mpo', 'Mapoly0089s0032' => 'mpo', 'MBI04_g42241_MAGBIO' => 'mbi', 'MBI05_g11988_MAGBIO' => 'mbi', 'MBI05_g35452_MAGBIO' => 'mbi', 'MBI07_g30179_MAGBIO' => 'mbi', 'MBI07_g35859_MAGBIO' => 'mbi', 'MBI07_g35860_MAGBIO' => 'mbi', 'MBI07_g37166_MAGBIO' => 'mbi', 'MBI08_g18172_MAGBIO' => 'mbi', 'MBI09_g08441_MAGBIO' => 'mbi', 'MBI13_g01676_MAGBIO' => 'mbi', 'MBI14_g42955_MAGBIO' => 'mbi', 'MBI16_g13161_MAGBIO' => 'mbi', 'MBI17_g27204_MAGBIO' => 'mbi', 'MBI19_g21595_MAGBIO' => 'mbi', 'MD00G1148400' => 'mdo', 'MD02G1301200' => 'mdo', 'MD03G1227800' => 'mdo', 'MD05G1041100' => 'mdo', 'MD05G1124800' => 'mdo', 'MD05G1284000' => 'mdo', 'MD05G1338800' => 'mdo', 'MD05G1338900' => 'mdo', 'MD07G1022800' => 'mdo', 'MD10G1047500' => 'mdo', 'MD10G1127500' => 'mdo', 'MD10G1262300' => 'mdo', 'MD10G1293800' => 'mdo', 'MD16G1074300' => 'mdo', 'Medtr1g021670' => 'mtr', 'Medtr1g096320' => 'mtr', 'Medtr2g013690' => 'mtr', 'Medtr2g019450' => 'mtr', 'Medtr2g085170' => 'mtr', 'Medtr4g088785' => 'mtr', 'Medtr8g055930' => 'mtr', 'Medtr8g085850' => 'mtr', 'MELO3C002605.2' => 'cme', 'MELO3C003891.2' => 'cme', 'MELO3C004012.2' => 'cme', 'MELO3C007134.2' => 'cme', 'MELO3C008118.2' => 'cme', 'MELO3C016700.2' => 'cme', 'MELO3C024127.2' => 'cme', 'MELO3C033361.2' => 'cme', 'MELO3C033362.2' => 'cme', 'Migut.C00430' => 'egut', 'Migut.C01246' => 'egut', 'Migut.E00101' => 'egut', 'Migut.H01486' => 'egut', 'Migut.H01939' => 'egut', 'Migut.K00360' => 'egut', 'Migut.M00910' => 'egut', 'Migut.M01139' => 'egut', 'Migut.N02677' => 'egut', 'MSTRG.13252' => 'ama', 'MSTRG.14701' => 'ama', 'MSTRG.1521' => 'ama', 'MSTRG.15884' => 'ama', 'MSTRG.16242' => 'ama', 'MSTRG.22285' => 'ama', 'MSTRG.22444' => 'ama', 'MSTRG.2349' => 'ama', 'MSTRG.26308' => 'ama', 'MSTRG.28296' => 'ama', 'MSTRG.9895' => 'ama', 'Nitab4.5_0000110g0060' => 'nta', 'Nitab4.5_0000420g0130' => 'nta', 'Nitab4.5_0000422g0030' => 'nta', 'Nitab4.5_0000560g0180' => 'nta', 'Nitab4.5_0000703g0100' => 'nta', 'Nitab4.5_0000786g0200' => 'nta', 'Nitab4.5_0001336g0020' => 'nta', 'Nitab4.5_0001796g0030' => 'nta', 'Nitab4.5_0003348g0060' => 'nta', 'Nitab4.5_0003698g0040' => 'nta', 'Nitab4.5_0003942g0090' => 'nta', 'Nitab4.5_0004775g0070' => 'nta', 'Nitab4.5_0004864g0030' => 'nta', 'Nitab4.5_0005615g0020' => 'nta', 'Nitab4.5_0009288g0030' => 'nta', 'Nitab4.5_0009341g0010' => 'nta', 'Nitab4.5_0009535g0010' => 'nta', 'Nn1g03995' => 'nnu', 'Nn1g04100' => 'nnu', 'Nn1g06530' => 'nnu', 'Nn3g16404' => 'nnu', 'Nn3g17212' => 'nnu', 'Nn3g20776' => 'nnu', 'Nn3g21923' => 'nnu', 'Nn5g27737' => 'nnu', 'Nn5g29461' => 'nnu', 'Nn7g38355' => 'nnu', 'Nn8g39873' => 'nnu', 'Oeu000548.2' => 'oeu', 'Oeu004672.1' => 'oeu', 'Oeu015605.2' => 'oeu', 'Oeu016092.1' => 'oeu', 'Oeu017879.3' => 'oeu', 'Oeu024910.1' => 'oeu', 'Oeu028965.1' => 'oeu', 'Oeu031269.1' => 'oeu', 'Oeu031270.1' => 'oeu', 'Oeu032535.1' => 'oeu', 'Oeu034151.1' => 'oeu', 'Oeu034152.1' => 'oeu', 'Oeu034588.2' => 'oeu', 'Oeu050846.1' => 'oeu', 'Oeu050849.2' => 'oeu', 'Oeu051063.2' => 'oeu', 'Oeu052368.1' => 'oeu', 'Oeu052370.1' => 'oeu', 'Os01g0210400' => 'osa', 'Os01g0304300' => 'osa', 'Os01g0749100' => 'osa', 'Os02g0745800' => 'osa', 'Os03g0769050' => 'osa', 'Os05g0531500' => 'osa', 'Os06g0724300' => 'osa', 'Os11g0198100' => 'osa', 'Peaxi162Scf00069g01425' => 'pax', 'Peaxi162Scf00280g00811' => 'pax', 'Peaxi162Scf00310g00615' => 'pax', 'Peaxi162Scf00362g00542' => 'pax', 'Peaxi162Scf00461g00310' => 'pax', 'Peaxi162Scf00530g00118' => 'pax', 'Peaxi162Scf00541g00057' => 'pax', 'Peaxi162Scf00661g00017' => 'pax', 'Peaxi162Scf00926g00027' => 'pax', 'Peaxi162Scf01064g00263' => 'pax', 'Peaxi162Scf01211g00135' => 'pax', 'PGR004G2336' => 'pgr', 'PGR042G0327' => 'pgr', 'PGR042G1957' => 'pgr', 'PGR042G2003' => 'pgr', 'PGR042G3929' => 'pgr', 'PGR083G1137' => 'pgr', 'PGR083G1364' => 'pgr', 'PGSC0003DMG400003381' => 'stu', 'PGSC0003DMG400003417' => 'stu', 'PGSC0003DMG400008981' => 'stu', 'PGSC0003DMG400012417' => 'stu', 'PGSC0003DMG400012823' => 'stu', 'PGSC0003DMG400016885' => 'stu', 'PGSC0003DMG400022812' => 'stu', 'PGSC0003DMG400029726' => 'stu', 'PGSC0003DMG401009243' => 'stu', 'PGSC0003DMG401031505' => 'stu', 'PGSC0003DMG402031505' => 'stu', 'Phvul.001G017600' => 'pvu', 'Phvul.002G193500' => 'pvu', 'Phvul.002G228900' => 'pvu', 'Phvul.002G236800' => 'pvu', 'Phvul.003G049500' => 'pvu', 'Phvul.005G072000' => 'pvu', 'Phvul.006G164800' => 'pvu', 'Phvul.006G185100' => 'pvu', 'Phvul.007G090000' => 'pvu', 'Potri.001G399800' => 'ptr', 'Potri.002G149900' => 'ptr', 'Potri.004G044100' => 'ptr', 'Potri.004G177600' => 'ptr', 'Potri.009G138000' => 'ptr', 'Potri.010G094000' => 'ptr', 'Potri.011G053000' => 'ptr', 'Potri.011G119300' => 'ptr', 'Potri.013G113700' => 'ptr', 'Potri.018G107800' => 'ptr', 'Potri.019G084100' => 'ptr', 'Pp3c14_23720' => 'ppa', 'Pp3c16_6340' => 'ppa', 'Pp3c23_13420' => 'ppa', 'Pp3c24_2740' => 'ppa', 'Pp3c25_860' => 'ppa', 'Pp3c8_21750' => 'ppa', 'Prupe.1G273000' => 'ppe', 'Prupe.1G273700' => 'ppe', 'Prupe.1G274100' => 'ppe', 'Prupe.2G023300' => 'ppe', 'Prupe.4G048000' => 'ppe', 'Prupe.4G080400' => 'ppe', 'Prupe.4G181200' => 'ppe', 'Prupe.8G056900' => 'ppe', 'Prupe.8G168700' => 'ppe', 'Psat1g189080' => 'psa', 'Psat1g204760' => 'psa', 'Psat4g175560' => 'psa', 'Psat4g177720' => 'psa', 'Psat5g244240' => 'psa', 'Psat6g010720' => 'psa', 'Psat6g187200' => 'psa', 'Psat7g072040' => 'psa', 'PSO017G3501' => 'pso', 'PSO063G2148' => 'pso', 'PSO063G5608' => 'pso', 'PSO210G6392' => 'pso', 'PSO541G2319' => 'pso', 'PSO541G2836' => 'pso', 'PSO541G4012' => 'pso', 'PSO541G6253' => 'pso', 'PSO675G0580' => 'pso', 'PSO675G0856' => 'pso', 'PSO675G5635' => 'pso', 'PSO675G9157' => 'pso', 'PSO832G1660' => 'pso', 'PSO832G1969' => 'pso', 'QL02p007186' => 'qlo', 'QL02p033904' => 'qlo', 'QL03p064391' => 'qlo', 'QL05p040593' => 'qlo', 'QL05p058242' => 'qlo', 'QL08p021825' => 'qlo', 'QL11p004981' => 'qlo', 'RcHm_v2.0_Chr1g0318301' => 'rch', 'RcHm_v2.0_Chr4g0418501' => 'rch', 'RcHm_v2.0_Chr4g0439971' => 'rch', 'RcHm_v2.0_Chr5g0008541' => 'rch', 'RcHm_v2.0_Chr5g0014101' => 'rch', 'RcHm_v2.0_Chr5g0014131' => 'rch', 'RcHm_v2.0_Chr5g0033621' => 'rch', 'RcHm_v2.0_Chr6g0272041' => 'rch', 'RcHm_v2.0_Chr6g0278831' => 'rch', 'Rhsim02G0130400' => 'rsi', 'Rhsim02G0171100' => 'rsi', 'Rhsim05G0053000' => 'rsi', 'Rhsim05G0053100' => 'rsi', 'Rhsim06G0096500' => 'rsi', 'Rhsim06G0096600' => 'rsi', 'Rhsim06G0199100' => 'rsi', 'Rhsim12G0062300' => 'rsi', 'Rhsim12G0062800' => 'rsi', 'Sabra02G0118600' => 'sbr', 'Sabra04G0027300' => 'sbr', 'Sabra04G0119500' => 'sbr', 'Sabra08G0112500' => 'sbr', 'Sabra11G0036800' => 'sbr', 'Sabra11G0103800' => 'sbr', 'Sabra13G0096300' => 'sbr', 'Sabra16G0262300' => 'sbr', 'Sabra18G0091700' => 'sbr', 'Sabra19G0095400' => 'sbr', 'SalBow6G3080' => 'sbo', 'SalBow7G1157' => 'sbo', 'SalBow7G2123' => 'sbo', 'SalBow7G2285' => 'sbo', 'SalBow7G3537' => 'sbo', 'SalBow8G2947' => 'sbo', 'SalBow8G4463' => 'sbo', 'SalBow8G5466' => 'sbo', 'Sc01g0001750' => 'sci', 'Sc02g0006640' => 'sci', 'Sc02g0006670' => 'sci', 'Sc04g0008220' => 'sci', 'Sc05g0006190' => 'sci', 'Sc08g0002760' => 'sci', 'Sc17g0006170' => 'sci', 'Sc22g0002050' => 'sci', 'Sc23g0001190' => 'sci', 'Sc24g0000980' => 'sci', 'Sed0006245' => 'sed', 'Sed0007543' => 'sed', 'Sed0009411' => 'sed', 'Sed0010765' => 'sed', 'Sed0012944' => 'sed', 'Sed0014682' => 'sed', 'Sed0016174' => 'sed', 'Sed0016796' => 'sed', 'Sed0020317' => 'sed', 'Sed0021467' => 'sed', 'SEGI_01316' => 'sgi', 'SEGI_03374' => 'sgi', 'SEGI_16265' => 'sgi', 'SEGI_18569' => 'sgi', 'SEGI_20351' => 'sgi', 'SEGI_26395' => 'sgi', 'SEGI_29469' => 'sgi', 'SEGI_34771' => 'sgi', 'SEGI_36769' => 'sgi', 'SEGI_37139' => 'sgi', 'SGA_v2.0_scaffold100G29687' => 'sas', 'SGA_v2.0_scaffold118G32472' => 'sas', 'SGA_v2.0_scaffold14G07051' => 'sas', 'SGA_v2.0_scaffold183G39845' => 'sas', 'SGA_v2.0_scaffold1G00174' => 'sas', 'SGA_v2.0_scaffold22G09714' => 'sas', 'SGA_v2.0_scaffold333G48992' => 'sas', 'SGA_v2.0_scaffold46G17491' => 'sas', 'SGA_v2.0_scaffold49G18294' => 'sas', 'SGA_v2.0_scaffold63G21658' => 'sas', 'SHI01741' => 'shi', 'SHI05771' => 'shi', 'SHI18077' => 'shi', 'SHI20525' => 'shi', 'SHI20527' => 'shi', 'SHI20528' => 'shi', 'SMO172G0185' => 'smo', 'SMO198G0020' => 'smo', 'SMO351G0006' => 'smo', 'SMO356G0118' => 'smo', 'SMO358G0296' => 'smo', 'SMO367G0079' => 'smo', 'SMO367G1277' => 'smo', 'Solyc01g014220.3' => 'sly', 'Solyc01g111770.2' => 'sly', 'Solyc02g078180.3' => 'sly', 'Solyc03g006430.3' => 'sly', 'Solyc03g006456.1' => 'sly', 'Solyc03g079860.2' => 'sly', 'Solyc04g079770.3' => 'sly', 'Solyc05g007430.4' => 'sly', 'Solyc07g063150.3' => 'sly', 'Solyc08g016620.3' => 'sly', 'Solyc09g057590.3' => 'sly', 'Solyc09g057600.1' => 'sly', 'Solyc10g009050.3' => 'sly', 'Solyc11g017420.2' => 'sly', 'Sopen01g053810' => 'spe', 'Sopen02g023040' => 'spe', 'Sopen03g002440' => 'spe', 'Sopen04g033350' => 'spe', 'Sopen05g003310' => 'spe', 'Sopen07g004050' => 'spe', 'Sopen07g031340' => 'spe', 'Sopen08g006990' => 'spe', 'Sopen10g004830' => 'spe', 'Sopen11g009370' => 'spe', 'Sp1g24450' => 'spa', 'Sp1g29670' => 'spa', 'Sp1g39600' => 'spa', 'Sp2g11080' => 'spa', 'Sp2g13970' => 'spa', 'Sp4g16130' => 'spa', 'Sp6g13080' => 'spa', 'Sp7g37270' => 'spa', 'TAR371G0065' => 'tar', 'TAR376G0340' => 'tar', 'TAR376G0435' => 'tar', 'TAR381G0002' => 'tar', 'TAR381G1236' => 'tar', 'TAR624G0055' => 'tar', 'TAR624G0324' => 'tar', 'TAR624G0696' => 'tar', 'TAR624G0906' => 'tar', 'TAR625G0107' => 'tar', 'TAR626G0015' => 'tar', 'TAR626G1356' => 'tar', 'TAR627G0888' => 'tar', 'TAR628G0399' => 'tar', 'TAR628G1327' => 'tar', 'TAR629G2831' => 'tar', 'TAR629G2874' => 'tar', 'TAR633G1432' => 'tar', 'TAR633G2771' => 'tar', 'THA.LOC104803394' => 'tha', 'THA.LOC104805153' => 'tha', 'THA.LOC104806784' => 'tha', 'THA.LOC104810473' => 'tha', 'THA.LOC104813100' => 'tha', 'THA.LOC104814215' => 'tha', 'THA.LOC104815554' => 'tha', 'THA.LOC104820544' => 'tha', 'THA.LOC104824754' => 'tha', 'THA.LOC104827717' => 'tha', 'Thecc.02G031400' => 'tca', 'Thecc.02G055900' => 'tca', 'Thecc.02G350800' => 'tca', 'Thecc.06G150900' => 'tca', 'Thecc.06G186600' => 'tca', 'Thecc.07G089600' => 'tca', 'Thecc.08G020400' => 'tca', 'Thecc.08G182100' => 'tca', 'Thhalv10000873m.g' => 'esa', 'Thhalv10004185m.g' => 'esa', 'Thhalv10006981m.g' => 'esa', 'Thhalv10007204m.g' => 'esa', 'Thhalv10011374m.g' => 'esa', 'Thhalv10013482m.g' => 'esa', 'Thhalv10017801m.g' => 'esa', 'Thhalv10024983m.g' => 'esa', 'TPR.G12072' => 'tpr', 'TPR.G15769' => 'tpr', 'TPR.G16504' => 'tpr', 'TPR.G16506' => 'tpr', 'TPR.G24345' => 'tpr', 'TPR.G26666' => 'tpr', 'TPR.G27320' => 'tpr', 'TPR.G31819' => 'tpr', 'TPR.G38879' => 'tpr', 'TPR.G39015' => 'tpr', 'TPR.G8819' => 'tpr', 'TWI09G0924' => 'twi', 'TWI12G0811' => 'twi', 'TWI12G1294' => 'twi', 'TWI31G0150' => 'twi', 'TWI36G1262' => 'twi', 'TWI38G1287' => 'twi', 'TWI38G1633' => 'twi', 'TWI38G1982' => 'twi', 'TWI39G0116' => 'twi', 'TWI60G1011' => 'twi', 'TWI63G0171' => 'twi', 'TWI73G0839' => 'twi', 'TWI79G1511' => 'twi', 'unitig_0.g915' => 'ugi', 'unitig_0.g916' => 'ugi', 'unitig_21.g20219' => 'ugi', 'unitig_21.g20416' => 'ugi', 'unitig_578.g16132' => 'ugi', 'unitig_578.g16718' => 'ugi', 'unitig_62.g23481' => 'ugi', 'unitig_744.g24535' => 'ugi', 'unitig_749.g13525' => 'ugi', 'vmacro01248' => 'vma', 'vmacro02290' => 'vma', 'vmacro10946' => 'vma', 'vmacro11865' => 'vma', 'vmacro12493' => 'vma', 'vmacro17322' => 'vma', 'vmacro21599' => 'vma', 'vmacro23041' => 'vma', 'VMungo0251G0004' => 'vmu', 'VMungo0251G2639' => 'vmu', 'VMungo0251G2967' => 'vmu', 'VMungo0540G0864' => 'vmu', 'VMungo0540G1569' => 'vmu', 'VMungo0647G0317' => 'vmu', 'VMungo0720G1373' => 'vmu', 'VMungo0720G1508' => 'vmu', 'VMungo1080G0485' => 'vmu', 'VMungo1215G3177' => 'vmu', 'Zm00001eb112600' => 'zma', 'Zm00001eb120220' => 'zma', 'Zm00001eb153240' => 'zma', 'Zm00001eb168880' => 'zma', 'Zm00001eb213920' => 'zma', 'Zm00001eb228280' => 'zma', 'Zm00001eb254580' => 'zma', 'Zm00001eb272180' => 'zma', 'Zm00001eb293190' => 'zma', 'Zm00001eb322930' => 'zma', 'Zm00001eb353360' => 'zma', 'Zm00001eb353390' => 'zma', 'Zm00001eb353430' => 'zma', 'Zm00001eb353440' => 'zma', 'Zm00001eb353780' => 'zma' ), 'gf_id' => 'HOM05D000499', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000499' ), 'data_identifier' => 'HOM05D000499', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000499', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1066', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p29780' => 'bna', 'A02p33180' => 'bna', 'A03p16470' => 'bna', 'A03p66010' => 'bna', 'A04p25970' => 'bna', 'A06p01270' => 'bna', 'A06p46080' => 'bna', 'A07p11400' => 'bna', 'A08p01840' => 'bna', 'A08p08230' => 'bna', 'A08p25740' => 'bna', 'A09p32070' => 'bna', 'A09p37830' => 'bna', 'A09p42840' => 'bna', 'A09p42850' => 'bna', 'Aa31LG10G2060' => 'aar', 'Aa31LG2G7410' => 'aar', 'Aa31LG6G10200' => 'aar', 'Aa31LG6G16680' => 'aar', 'Aa31LG6G8470' => 'aar', 'Aa31LG9G12730' => 'aar', 'Aa31LG9G13680' => 'aar', 'Aa31LG9G14920' => 'aar', 'Aa31LG9G6650' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4977' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5467' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3254' => 'aag', 'Actinidia02578' => 'ach', 'Actinidia07693' => 'ach', 'Actinidia08413' => 'ach', 'Actinidia08414' => 'ach', 'Actinidia15289' => 'ach', 'Actinidia19871' => 'ach', 'Actinidia21475' => 'ach', 'Actinidia22576' => 'ach', 'Actinidia28327' => 'ach', 'Actinidia32491' => 'ach', 'Actinidia39463' => 'ach', 'Actinidia39571' => 'ach', 'Ah.01g013750' => 'amhyb', 'Ah.01g023210' => 'amhyb', 'Ah.04g164850' => 'amhyb', 'Ah.05g178060' => 'amhyb', 'Ah.07g204270' => 'amhyb', 'Ah.07g208480' => 'amhyb', 'Ah.09g237410' => 'amhyb', 'Ah.14g089460' => 'amhyb', 'AL1G41790' => 'aly', 'AL1G49050' => 'aly', 'AL1G53810' => 'aly', 'AL1G61400' => 'aly', 'AL4G18580' => 'aly', 'AL5G12510' => 'aly', 'AL5G12540' => 'aly', 'AL6G43230' => 'aly', 'AL7G10370' => 'aly', 'AL7G19250' => 'aly', 'AL8G12240' => 'aly', 'AL8G18540' => 'aly', 'Aqoxy1G02409' => 'aox', 'Aqoxy2G03993' => 'aox', 'Aqoxy3G03357' => 'aox', 'Aqoxy4G00785' => 'aox', 'Aqoxy5G02598' => 'aox', 'Aqoxy6G00132' => 'aox', 'Aqoxy7G01776' => 'aox', 'Aqoxy7G02316' => 'aox', 'Aqoxy7G03973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.12AFKW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B8730' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27IQR1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3F75VG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3RE0GA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41TCQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.527VTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FIR39' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5W8UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DA38EV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ63HS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H1I32C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HC27T5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4M8AP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7N3CZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9UVDZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LS1NQA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT1D4B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SKC4TM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCFV76' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF9Q1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQWD9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1ZM88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WE07RT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YCK7VH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJE6Q6' => 'arhy', 'AT1G28240' => 'ath', 'AT1G34550' => 'ath', 'AT1G53040' => 'ath', 'AT2G02910' => 'ath', 'AT4G09630' => 'ath', 'AT4G38500' => 'ath', 'AT5G42660' => 'ath', 'AT5G46220' => 'ath', 'ATR0152G026' => 'atr', 'ATR0564G343' => 'atr', 'ATR0706G151' => 'atr', 'ATR0733G207' => 'atr', 'ATR0751G234' => 'atr', 'ATR0807G048' => 'atr', 'ATR1091G084' => 'atr', 'Atru.chr10.1229' => 'acertr', 'Atru.chr10.1230' => 'acertr', 'Atru.chr10.1874' => 'acertr', 'Atru.chr11.1808' => 'acertr', 'Atru.chr13.1795' => 'acertr', 'Atru.chr13.570' => 'acertr', 'Atru.chr2.2608' => 'acertr', 'Atru.chr2.2609' => 'acertr', 'Atru.chr5.3428' => 'acertr', 'Atru.chr8.1171' => 'acertr', 'AUR62004651' => 'cqu', 'AUR62008675' => 'cqu', 'AUR62010014' => 'cqu', 'AUR62013004' => 'cqu', 'AUR62014825' => 'cqu', 'AUR62015015' => 'cqu', 'AUR62015151' => 'cqu', 'AUR62017020' => 'cqu', 'AUR62019422' => 'cqu', 'AUR62023570' => 'cqu', 'AUR62025571' => 'cqu', 'AUR62029098' => 'cqu', 'AUR62033863' => 'cqu', 'AUR62034296' => 'cqu', 'AUR62040075' => 'cqu', 'BcaB02g07334' => 'bca', 'BcaB02g10575' => 'bca', 'BcaB03g12119' => 'bca', 'BcaB03g12120' => 'bca', 'BcaB03g13945' => 'bca', 'BcaB04g17123' => 'bca', 'BcaB04g17867' => 'bca', 'BcaB04g19839' => 'bca', 'BcaB07g30317' => 'bca', 'BcaB07g32432' => 'bca', 'BcaB07g33362' => 'bca', 'BcaB08g36611' => 'bca', 'BcaC01g00028' => 'bca', 'BcaC01g01356' => 'bca', 'BcaC01g02034' => 'bca', 'BcaC01g06051' => 'bca', 'BcaC03g16839' => 'bca', 'BcaC03g17176' => 'bca', 'BcaC05g26829' => 'bca', 'BcaC06g31490' => 'bca', 'BcaC06g35344' => 'bca', 'BcaC06g36570' => 'bca', 'BcaC07g37537' => 'bca', 'BcaC08g43491' => 'bca', 'BcaC08g43773' => 'bca', 'BcaNung00234' => 'bca', 'BcaNung01982' => 'bca', 'BcaNung03707' => 'bca', 'BcaNung06454' => 'bca', 'BolC2t10762H' => 'bol', 'BolC2t11191H' => 'bol', 'BolC3t14322H' => 'bol', 'BolC3t19747H' => 'bol', 'BolC3t21425H' => 'bol', 'BolC4t27800H' => 'bol', 'BolC5t31423H' => 'bol', 'BolC6t35951H' => 'bol', 'BolC6t36282H' => 'bol', 'BolC7t40678H' => 'bol', 'BolC7t40679H' => 'bol', 'BolC7t42222H' => 'bol', 'BolC7t43492H' => 'bol', 'BolC7t46785H' => 'bol', 'BolC8t47853H' => 'bol', 'BolC9t56805H' => 'bol', 'BraA02t08000Z' => 'bra', 'BraA02t08341Z' => 'bra', 'BraA03t10936Z' => 'bra', 'BraA03t15657Z' => 'bra', 'BraA04t18100Z' => 'bra', 'BraA05t20523Z' => 'bra', 'BraA06t23353Z' => 'bra', 'BraA06t27473Z' => 'bra', 'BraA06t27769Z' => 'bra', 'BraA07t28928Z' => 'bra', 'BraA08t32236Z' => 'bra', 'BraA08t32841Z' => 'bra', 'BraA08t34524Z' => 'bra', 'BraA09t38742Z' => 'bra', 'BraA09t39295Z' => 'bra', 'C02p47180' => 'bna', 'C02p50990' => 'bna', 'C03p19360' => 'bna', 'C03p74950' => 'bna', 'C03p91000' => 'bna', 'C04p63260' => 'bna', 'C05p27050' => 'bna', 'C06p08750' => 'bna', 'C06p11490' => 'bna', 'C07p02820' => 'bna', 'C07p17180' => 'bna', 'C07p29440' => 'bna', 'C07p63730' => 'bna', 'C09p39260' => 'bna', 'CAN.G1164.34' => 'can', 'CAN.G1164.39' => 'can', 'CAN.G1530.3' => 'can', 'CAN.G162.61' => 'can', 'CAN.G176.6' => 'can', 'CAN.G289.49' => 'can', 'CAN.G370.21' => 'can', 'CAN.G370.22' => 'can', 'CAN.G371.117' => 'can', 'CAN.G58.37' => 'can', 'CAN.G588.98' => 'can', 'CANSAT21G2266' => 'cansat', 'CANSAT25G2799' => 'cansat', 'CANSAT35G0862' => 'cansat', 'CANSAT35G1704' => 'cansat', 'CANSAT35G1760' => 'cansat', 'CANSAT56G3971' => 'cansat', 'CANSAT56G4116' => 'cansat', 'CANSAT80G1259' => 'cansat', 'CARHR027730' => 'chi', 'CARHR033880' => 'chi', 'CARHR043270' => 'chi', 'CARHR145330' => 'chi', 'CARHR145340' => 'chi', 'CARHR175570' => 'chi', 'CARHR181570' => 'chi', 'CARHR258470' => 'chi', 'CARHR260490' => 'chi', 'CARHR294220' => 'chi', 'Carub.0001s2668' => 'cru', 'Carub.0001s3257' => 'cru', 'Carub.0001s4220' => 'cru', 'Carub.0005s0179' => 'cru', 'Carub.0006s2807' => 'cru', 'Carub.0007s0039' => 'cru', 'Carub.0008s0169' => 'cru', 'Carub.0008s0636' => 'cru', 'Ca_00338_v3' => 'car', 'Ca_00542_v3' => 'car', 'Ca_01844_v3' => 'car', 'Ca_10611_v3' => 'car', 'Ca_13326_v3' => 'car', 'Ca_17944_v3' => 'car', 'Ca_18546_v3' => 'car', 'Ca_24219_v3' => 'car', 'Ca_29972_v3' => 'car', 'CBR_g3681' => 'cbr', 'CBR_g40021' => 'cbr', 'Cc01_g08140' => 'ccan', 'Cc02_g13410' => 'ccan', 'Cc02_g37480' => 'ccan', 'Cc05_g12030' => 'ccan', 'Cc09_g03370' => 'ccan', 'Cc09_g10300' => 'ccan', 'Cc10_g03530' => 'ccan', 'Cc10_g11380' => 'ccan', 'CDE01G0176' => 'cde', 'CDE02G0675' => 'cde', 'CDE02G0942' => 'cde', 'CDE02G1153' => 'cde', 'CDE02G4177' => 'cde', 'CDE04G2117' => 'cde', 'CDE04G2736' => 'cde', 'CDE08G1161' => 'cde', 'CDE09G1238' => 'cde', 'Cfa000467' => 'cfa', 'Cfa000947' => 'cfa', 'Cfa004969' => 'cfa', 'Cfa005284' => 'cfa', 'Cfa008993' => 'cfa', 'Cfa018187' => 'cfa', 'Cfa018454' => 'cfa', 'Cfa020585' => 'cfa', 'Ciclev10000424m.g' => 'ccl', 'Ciclev10003605m.g' => 'ccl', 'Ciclev10007828m.g' => 'ccl', 'Ciclev10014620m.g' => 'ccl', 'Ciclev10015169m.g' => 'ccl', 'Ciclev10018291m.g' => 'ccl', 'Ciclev10028256m.g' => 'ccl', 'Ciclev10033822m.g' => 'ccl', 'CiPaw.05G060300' => 'cil', 'CiPaw.05G085000' => 'cil', 'CiPaw.06G083700' => 'cil', 'CiPaw.06G120300' => 'cil', 'CiPaw.09G060500' => 'cil', 'CiPaw.09G123800' => 'cil', 'CiPaw.11G169700' => 'cil', 'CiPaw.12G118300' => 'cil', 'CiPaw.15G071000' => 'cil', 'CiPaw.15G081900' => 'cil', 'ClCG01G024610' => 'cla', 'ClCG03G006070' => 'cla', 'ClCG05G019250' => 'cla', 'ClCG09G009500' => 'cla', 'ClCG11G008200' => 'cla', 'ClCG11G018080' => 'cla', 'COL.COLO4_17373' => 'col', 'COL.COLO4_22994' => 'col', 'COL.COLO4_26389' => 'col', 'COL.COLO4_27170' => 'col', 'COL.COLO4_31074' => 'col', 'COL.COLO4_31465' => 'col', 'COL.COLO4_36438' => 'col', 'COL.COLO4_36439' => 'col', 'Cpa.g.c38781' => 'cpa', 'Cpa.g.sc128.12' => 'cpa', 'Cpa.g.sc166.7' => 'cpa', 'Cpa.g.sc166.8' => 'cpa', 'Cpa.g.sc20.111' => 'cpa', 'Cpa.g.sc27.31' => 'cpa', 'Cpa.g.sc64.36' => 'cpa', 'Cpa.g.sc64.37' => 'cpa', 'Cpa.g.sc66.49' => 'cpa', 'Cpa.g.sc80.64' => 'cpa', 'CsaV3_1G012320' => 'csa', 'CsaV3_2G008480' => 'csa', 'CsaV3_2G033450' => 'csa', 'CsaV3_3G044830' => 'csa', 'CsaV3_4G033710' => 'csa', 'CsaV3_6G051730' => 'csa', 'CsaV3_7G025350' => 'csa', 'CSS0001067' => 'camsi', 'CSS0005996' => 'camsi', 'CSS0006590' => 'camsi', 'CSS0009673' => 'camsi', 'CSS0010201' => 'camsi', 'CSS0010549' => 'camsi', 'CSS0011364' => 'camsi', 'CSS0014473' => 'camsi', 'CSS0014961' => 'camsi', 'CSS0020191' => 'camsi', 'CSS0021165' => 'camsi', 'CSS0022306' => 'camsi', 'CSS0030591' => 'camsi', 'CSS0030696' => 'camsi', 'CSS0032653' => 'camsi', 'CSS0037487' => 'camsi', 'CSS0041102' => 'camsi', 'CSS0041261' => 'camsi', 'CSS0046246' => 'camsi', 'CSS0049256' => 'camsi', 'DCAR_004075' => 'dca', 'DCAR_011538' => 'dca', 'DCAR_019553' => 'dca', 'DCAR_020952' => 'dca', 'DCAR_021739' => 'dca', 'DCAR_027407' => 'dca', 'DCAR_027913' => 'dca', 'DCAR_028066' => 'dca', 'Dinv05899' => 'din', 'Dinv07563' => 'din', 'Dinv08010' => 'din', 'Dinv14125' => 'din', 'Dinv20172' => 'din', 'Dinv30743' => 'din', 'Dinv31229' => 'din', 'Dinv34162' => 'din', 'Dinv36028' => 'din', 'Dinv39368' => 'din', 'Dinv40565' => 'din', 'Dinv41706' => 'din', 'Duzib052G0089' => 'dzi', 'Duzib116G0641' => 'dzi', 'Duzib132G0069' => 'dzi', 'Duzib132G1219' => 'dzi', 'Duzib147G0278' => 'dzi', 'Duzib160G0480' => 'dzi', 'Duzib170G0661' => 'dzi', 'Duzib177G0591' => 'dzi', 'Duzib187G1353' => 'dzi', 'Duzib192G0858' => 'dzi', 'Duzib192G0883' => 'dzi', 'Duzib213G0506' => 'dzi', 'Duzib235G0289' => 'dzi', 'Duzib251G0422' => 'dzi', 'ECA232G3898' => 'eca', 'ECA233G5950' => 'eca', 'ECA234G1699' => 'eca', 'ECA234G2421' => 'eca', 'ECA236G0426' => 'eca', 'ECA236G4331' => 'eca', 'ECA248G2573' => 'eca', 'EL10Ac1g00077' => 'bvu', 'EL10Ac1g01746' => 'bvu', 'EL10Ac2g03464' => 'bvu', 'EL10Ac4g08176' => 'bvu', 'EL10Ac7g17521' => 'bvu', 'EL10Ac8g20386' => 'bvu', 'EL10Ac9g21343' => 'bvu', 'EL10Ac9g22688' => 'bvu', 'Eucgr.B03434' => 'egr', 'Eucgr.D00618' => 'egr', 'Eucgr.E02395' => 'egr', 'Eucgr.F01129' => 'egr', 'Eucgr.F02622' => 'egr', 'Eucgr.F04207' => 'egr', 'FAN01G0570' => 'fan', 'FAN03G3351' => 'fan', 'FAN06G3702' => 'fan', 'FAN07G2149' => 'fan', 'FAN10G3758' => 'fan', 'FAN11G1170' => 'fan', 'FAN11G2050' => 'fan', 'FAN11G2724' => 'fan', 'FAN12G1700' => 'fan', 'FAN12G2028' => 'fan', 'FAN15G1160' => 'fan', 'FAN15G3063' => 'fan', 'FAN16G2540' => 'fan', 'FAN16G3077' => 'fan', 'FAN16G3624' => 'fan', 'FAN17G0221' => 'fan', 'FAN20G2492' => 'fan', 'FAN20G2905' => 'fan', 'FAN21G0548' => 'fan', 'FAN21G1300' => 'fan', 'FAN22G0077' => 'fan', 'FAN22G1315' => 'fan', 'FAN24G1280' => 'fan', 'FAN24G1445' => 'fan', 'FAN24G3527' => 'fan', 'FAN25G0464' => 'fan', 'FAN25G2885' => 'fan', 'FAN25G3270' => 'fan', 'FAN27G1101' => 'fan', 'FAN27G2846' => 'fan', 'FAN27G3524' => 'fan', 'FvH4_2g11770' => 'fve', 'FvH4_2g15630' => 'fve', 'FvH4_3g05570' => 'fve', 'FvH4_3g09110' => 'fve', 'FvH4_3g19940' => 'fve', 'FvH4_4g04821' => 'fve', 'FvH4_4g31480' => 'fve', 'FvH4_7g01740' => 'fve', 'Glyma.05G130400' => 'gma', 'Glyma.05G156400' => 'gma', 'Glyma.07G197000' => 'gma', 'Glyma.08G085151' => 'gma', 'Glyma.08G114500' => 'gma', 'Glyma.08G300400' => 'gma', 'Glyma.10G215800' => 'gma', 'Glyma.12G224400' => 'gma', 'Glyma.13G179300' => 'gma', 'Glyma.13G218151' => 'gma', 'Glyma.13G238800' => 'gma', 'Glyma.13G276900' => 'gma', 'Glyma.14G078200' => 'gma', 'Glyma.15G074500' => 'gma', 'Glyma.15G094100' => 'gma', 'Glyma.17G247200' => 'gma', 'Glyma.18G120100' => 'gma', 'Glyma.20G176000' => 'gma', 'Gohir.A01G063600' => 'ghi', 'Gohir.A01G170301' => 'ghi', 'Gohir.A02G060500' => 'ghi', 'Gohir.A05G133850' => 'ghi', 'Gohir.A05G161400' => 'ghi', 'Gohir.A06G012900' => 'ghi', 'Gohir.A06G035901' => 'ghi', 'Gohir.A06G127100' => 'ghi', 'Gohir.A06G210500' => 'ghi', 'Gohir.A08G008650' => 'ghi', 'Gohir.A09G072700' => 'ghi', 'Gohir.A09G088301' => 'ghi', 'Gohir.A10G040600' => 'ghi', 'Gohir.A12G036300' => 'ghi', 'Gohir.A12G143350' => 'ghi', 'Gohir.A12G165500' => 'ghi', 'Gohir.A13G145700' => 'ghi', 'Gohir.D01G050000' => 'ghi', 'Gohir.D01G051366' => 'ghi', 'Gohir.D01G161350' => 'ghi', 'Gohir.D02G065900' => 'ghi', 'Gohir.D05G164200' => 'ghi', 'Gohir.D05G355500' => 'ghi', 'Gohir.D06G010400' => 'ghi', 'Gohir.D06G111250' => 'ghi', 'Gohir.D06G132000' => 'ghi', 'Gohir.D06G210500' => 'ghi', 'Gohir.D07G165675' => 'ghi', 'Gohir.D08G062240' => 'ghi', 'Gohir.D08G086101' => 'ghi', 'Gohir.D08G138060' => 'ghi', 'Gohir.D09G072300' => 'ghi', 'Gohir.D10G041400' => 'ghi', 'Gohir.D11G191020' => 'ghi', 'Gohir.D11G212066' => 'ghi', 'Gohir.D12G036300' => 'ghi', 'Gohir.D12G168600' => 'ghi', 'Gohir.D13G150600' => 'ghi', 'Gorai.001G057300' => 'gra', 'Gorai.002G069900' => 'gra', 'Gorai.002G200000' => 'gra', 'Gorai.003G067600' => 'gra', 'Gorai.005G074800' => 'gra', 'Gorai.006G087300' => 'gra', 'Gorai.008G037500' => 'gra', 'Gorai.008G181400' => 'gra', 'Gorai.009G169400' => 'gra', 'Gorai.009G387900' => 'gra', 'Gorai.010G013300' => 'gra', 'Gorai.010G153800' => 'gra', 'Gorai.010G255800' => 'gra', 'Gorai.011G043700' => 'gra', 'Gorai.011G198900' => 'gra', 'Gorai.013G168400' => 'gra', 'GSVIVG01005212001' => 'vvi', 'GSVIVG01006163001' => 'vvi', 'GSVIVG01009625001' => 'vvi', 'GSVIVG01014338001' => 'vvi', 'GSVIVG01020005001' => 'vvi', 'GSVIVG01021450001' => 'vvi', 'GSVIVG01023975001' => 'vvi', 'GSVIVG01034490001' => 'vvi', 'HanXRQChr04g0112071' => 'han', 'HanXRQChr05g0131151' => 'han', 'HanXRQChr09g0262371' => 'han', 'HanXRQChr09g0268401' => 'han', 'HanXRQChr10g0279241' => 'han', 'HanXRQChr10g0297961' => 'han', 'HanXRQChr11g0326231' => 'han', 'HanXRQChr11g0328471' => 'han', 'HanXRQChr16g0507941' => 'han', 'HanXRQChr17g0560211' => 'han', 'Haze_02108' => 'cav', 'Haze_02428' => 'cav', 'Haze_05593' => 'cav', 'Haze_06448' => 'cav', 'Haze_09427' => 'cav', 'Haze_12022' => 'cav', 'Haze_17612' => 'cav', 'Haze_17928' => 'cav', 'Hma1.2p1_0032F.1_g019250' => 'hma', 'Hma1.2p1_0163F.1_g072690' => 'hma', 'Hma1.2p1_0265F.1_g106710' => 'hma', 'Hma1.2p1_0286F.1_g113970' => 'hma', 'Hma1.2p1_0363F.1_g136640' => 'hma', 'Hma1.2p1_0584F.1_g183470' => 'hma', 'Hma1.2p1_0885F.1_g232570' => 'hma', 'HPP92_006022' => 'vpl', 'HPP92_007320' => 'vpl', 'HPP92_011521' => 'vpl', 'HPP92_019387' => 'vpl', 'HPP92_024038' => 'vpl', 'Hund05891' => 'sun', 'Hund06450' => 'sun', 'Hund12053' => 'sun', 'Hund16800' => 'sun', 'Hund21222' => 'sun', 'Hund22896' => 'sun', 'Hund23746' => 'sun', 'Hund27083' => 'sun', 'Lalb_Chr02g0141831' => 'lal', 'Lalb_Chr02g0141841' => 'lal', 'Lalb_Chr05g0220411' => 'lal', 'Lalb_Chr06g0162081' => 'lal', 'Lalb_Chr09g0327651' => 'lal', 'Lalb_Chr13g0295051' => 'lal', 'Lalb_Chr15g0086801' => 'lal', 'Lalb_Chr16g0383781' => 'lal', 'Lalb_Chr16g0383791' => 'lal', 'Lalb_Chr18g0055441' => 'lal', 'Lalb_Chr18g0059611' => 'lal', 'Lalb_Chr20g0109661' => 'lal', 'Lalb_Chr20g0109831' => 'lal', 'Lalb_Chr20g0121871' => 'lal', 'Lalb_Chr22g0355361' => 'lal', 'Lalb_Chr25g0286371' => 'lal', 'Lj1A1187G43' => 'lonja', 'Lj1A1205T50' => 'lonja', 'Lj1A800G33' => 'lonja', 'Lj1C1187T7' => 'lonja', 'Lj1C843T11' => 'lonja', 'Lj1g0010940' => 'lja', 'Lj2A288T69' => 'lonja', 'Lj3g0024276' => 'lja', 'Lj4A47T76' => 'lonja', 'Lj4g0005805' => 'lja', 'Lj4g0006097' => 'lja', 'Lj4g0008528' => 'lja', 'Lj4g0024907' => 'lja', 'Lj5g0012472' => 'lja', 'Lj5g0018648' => 'lja', 'Lj6C789G1' => 'lonja', 'Lj6g0004000' => 'lja', 'Lj7A292G67' => 'lonja', 'Lj7A292T64' => 'lonja', 'Lj9A400T58' => 'lonja', 'Lsat_1_v5_gn_1_126181' => 'lsa', 'Lsat_1_v5_gn_4_123041' => 'lsa', 'Lsat_1_v5_gn_4_133620' => 'lsa', 'Lsat_1_v5_gn_4_53221' => 'lsa', 'Lsat_1_v5_gn_4_71961' => 'lsa', 'Lsat_1_v5_gn_7_105241' => 'lsa', 'Lsat_1_v5_gn_7_21361' => 'lsa', 'Lsat_1_v5_gn_7_28860' => 'lsa', 'Lsat_1_v5_gn_7_31260' => 'lsa', 'Lsat_1_v5_gn_8_52801' => 'lsa', 'Manes.02G191400' => 'mes', 'Manes.03G110100' => 'mes', 'Manes.04G071100' => 'mes', 'Manes.05G100500' => 'mes', 'Manes.05G164700' => 'mes', 'Manes.15G087000' => 'mes', 'Manes.15G121500' => 'mes', 'Manes.16G028300' => 'mes', 'Manes.17G046100' => 'mes', 'Manes.17G069800' => 'mes', 'Manes.18G100500' => 'mes', 'Mapoly0002s0109' => 'mpo', 'Mapoly0024s0007' => 'mpo', 'Mapoly0089s0032' => 'mpo', 'MBI04_g42241_MAGBIO' => 'mbi', 'MBI05_g11988_MAGBIO' => 'mbi', 'MBI05_g35452_MAGBIO' => 'mbi', 'MBI07_g30179_MAGBIO' => 'mbi', 'MBI07_g35859_MAGBIO' => 'mbi', 'MBI07_g35860_MAGBIO' => 'mbi', 'MBI07_g37166_MAGBIO' => 'mbi', 'MBI08_g18172_MAGBIO' => 'mbi', 'MBI09_g08441_MAGBIO' => 'mbi', 'MBI13_g01676_MAGBIO' => 'mbi', 'MBI14_g42955_MAGBIO' => 'mbi', 'MBI16_g13161_MAGBIO' => 'mbi', 'MBI17_g27204_MAGBIO' => 'mbi', 'MBI19_g21595_MAGBIO' => 'mbi', 'MD00G1148400' => 'mdo', 'MD02G1301200' => 'mdo', 'MD03G1227800' => 'mdo', 'MD05G1041100' => 'mdo', 'MD05G1124800' => 'mdo', 'MD05G1284000' => 'mdo', 'MD05G1338800' => 'mdo', 'MD05G1338900' => 'mdo', 'MD07G1022800' => 'mdo', 'MD10G1047500' => 'mdo', 'MD10G1127500' => 'mdo', 'MD10G1262300' => 'mdo', 'MD10G1293800' => 'mdo', 'MD16G1074300' => 'mdo', 'Medtr1g021670' => 'mtr', 'Medtr1g096320' => 'mtr', 'Medtr2g013690' => 'mtr', 'Medtr2g019450' => 'mtr', 'Medtr2g085170' => 'mtr', 'Medtr4g088785' => 'mtr', 'Medtr8g055930' => 'mtr', 'Medtr8g085850' => 'mtr', 'MELO3C002605.2' => 'cme', 'MELO3C003891.2' => 'cme', 'MELO3C004012.2' => 'cme', 'MELO3C007134.2' => 'cme', 'MELO3C008118.2' => 'cme', 'MELO3C016700.2' => 'cme', 'MELO3C024127.2' => 'cme', 'MELO3C033361.2' => 'cme', 'MELO3C033362.2' => 'cme', 'Migut.C00430' => 'egut', 'Migut.C01246' => 'egut', 'Migut.E00101' => 'egut', 'Migut.H01486' => 'egut', 'Migut.H01939' => 'egut', 'Migut.K00360' => 'egut', 'Migut.M00910' => 'egut', 'Migut.M01139' => 'egut', 'Migut.N02677' => 'egut', 'MSTRG.13252' => 'ama', 'MSTRG.14701' => 'ama', 'MSTRG.1521' => 'ama', 'MSTRG.15884' => 'ama', 'MSTRG.16242' => 'ama', 'MSTRG.22285' => 'ama', 'MSTRG.22444' => 'ama', 'MSTRG.2349' => 'ama', 'MSTRG.26308' => 'ama', 'MSTRG.28296' => 'ama', 'MSTRG.9895' => 'ama', 'Nitab4.5_0000110g0060' => 'nta', 'Nitab4.5_0000420g0130' => 'nta', 'Nitab4.5_0000422g0030' => 'nta', 'Nitab4.5_0000560g0180' => 'nta', 'Nitab4.5_0000703g0100' => 'nta', 'Nitab4.5_0000786g0200' => 'nta', 'Nitab4.5_0001336g0020' => 'nta', 'Nitab4.5_0001796g0030' => 'nta', 'Nitab4.5_0003348g0060' => 'nta', 'Nitab4.5_0003698g0040' => 'nta', 'Nitab4.5_0003942g0090' => 'nta', 'Nitab4.5_0004775g0070' => 'nta', 'Nitab4.5_0004864g0030' => 'nta', 'Nitab4.5_0005615g0020' => 'nta', 'Nitab4.5_0009288g0030' => 'nta', 'Nitab4.5_0009341g0010' => 'nta', 'Nitab4.5_0009535g0010' => 'nta', 'Nn1g03995' => 'nnu', 'Nn1g04100' => 'nnu', 'Nn1g06530' => 'nnu', 'Nn3g16404' => 'nnu', 'Nn3g17212' => 'nnu', 'Nn3g20776' => 'nnu', 'Nn3g21923' => 'nnu', 'Nn5g27737' => 'nnu', 'Nn5g29461' => 'nnu', 'Nn7g38355' => 'nnu', 'Nn8g39873' => 'nnu', 'Oeu000548.2' => 'oeu', 'Oeu004672.1' => 'oeu', 'Oeu015605.2' => 'oeu', 'Oeu016092.1' => 'oeu', 'Oeu017879.3' => 'oeu', 'Oeu024910.1' => 'oeu', 'Oeu028965.1' => 'oeu', 'Oeu031269.1' => 'oeu', 'Oeu031270.1' => 'oeu', 'Oeu032535.1' => 'oeu', 'Oeu034151.1' => 'oeu', 'Oeu034152.1' => 'oeu', 'Oeu034588.2' => 'oeu', 'Oeu050846.1' => 'oeu', 'Oeu050849.2' => 'oeu', 'Oeu051063.2' => 'oeu', 'Oeu052368.1' => 'oeu', 'Oeu052370.1' => 'oeu', 'Os01g0210400' => 'osa', 'Os01g0304300' => 'osa', 'Os01g0749100' => 'osa', 'Os02g0745800' => 'osa', 'Os03g0769050' => 'osa', 'Os05g0531500' => 'osa', 'Os06g0724300' => 'osa', 'Os11g0198100' => 'osa', 'Peaxi162Scf00069g01425' => 'pax', 'Peaxi162Scf00280g00811' => 'pax', 'Peaxi162Scf00310g00615' => 'pax', 'Peaxi162Scf00362g00542' => 'pax', 'Peaxi162Scf00461g00310' => 'pax', 'Peaxi162Scf00530g00118' => 'pax', 'Peaxi162Scf00541g00057' => 'pax', 'Peaxi162Scf00661g00017' => 'pax', 'Peaxi162Scf00926g00027' => 'pax', 'Peaxi162Scf01064g00263' => 'pax', 'Peaxi162Scf01211g00135' => 'pax', 'PGR004G2336' => 'pgr', 'PGR042G0327' => 'pgr', 'PGR042G1957' => 'pgr', 'PGR042G2003' => 'pgr', 'PGR042G3929' => 'pgr', 'PGR083G1137' => 'pgr', 'PGR083G1364' => 'pgr', 'PGSC0003DMG400003381' => 'stu', 'PGSC0003DMG400003417' => 'stu', 'PGSC0003DMG400008981' => 'stu', 'PGSC0003DMG400012417' => 'stu', 'PGSC0003DMG400012823' => 'stu', 'PGSC0003DMG400016885' => 'stu', 'PGSC0003DMG400022812' => 'stu', 'PGSC0003DMG400029726' => 'stu', 'PGSC0003DMG401009243' => 'stu', 'PGSC0003DMG401031505' => 'stu', 'PGSC0003DMG402031505' => 'stu', 'Phvul.001G017600' => 'pvu', 'Phvul.002G193500' => 'pvu', 'Phvul.002G228900' => 'pvu', 'Phvul.002G236800' => 'pvu', 'Phvul.003G049500' => 'pvu', 'Phvul.005G072000' => 'pvu', 'Phvul.006G164800' => 'pvu', 'Phvul.006G185100' => 'pvu', 'Phvul.007G090000' => 'pvu', 'Potri.001G399800' => 'ptr', 'Potri.002G149900' => 'ptr', 'Potri.004G044100' => 'ptr', 'Potri.004G177600' => 'ptr', 'Potri.009G138000' => 'ptr', 'Potri.010G094000' => 'ptr', 'Potri.011G053000' => 'ptr', 'Potri.011G119300' => 'ptr', 'Potri.013G113700' => 'ptr', 'Potri.018G107800' => 'ptr', 'Potri.019G084100' => 'ptr', 'Pp3c14_23720' => 'ppa', 'Pp3c16_6340' => 'ppa', 'Pp3c23_13420' => 'ppa', 'Pp3c24_2740' => 'ppa', 'Pp3c25_860' => 'ppa', 'Pp3c8_21750' => 'ppa', 'Prupe.1G273000' => 'ppe', 'Prupe.1G273700' => 'ppe', 'Prupe.1G274100' => 'ppe', 'Prupe.2G023300' => 'ppe', 'Prupe.4G048000' => 'ppe', 'Prupe.4G080400' => 'ppe', 'Prupe.4G181200' => 'ppe', 'Prupe.8G056900' => 'ppe', 'Prupe.8G168700' => 'ppe', 'Psat1g189080' => 'psa', 'Psat1g204760' => 'psa', 'Psat4g175560' => 'psa', 'Psat4g177720' => 'psa', 'Psat5g244240' => 'psa', 'Psat6g010720' => 'psa', 'Psat6g187200' => 'psa', 'Psat7g072040' => 'psa', 'PSO017G3501' => 'pso', 'PSO063G2148' => 'pso', 'PSO063G5608' => 'pso', 'PSO210G6392' => 'pso', 'PSO541G2319' => 'pso', 'PSO541G2836' => 'pso', 'PSO541G4012' => 'pso', 'PSO541G6253' => 'pso', 'PSO675G0580' => 'pso', 'PSO675G0856' => 'pso', 'PSO675G5635' => 'pso', 'PSO675G9157' => 'pso', 'PSO832G1660' => 'pso', 'PSO832G1969' => 'pso', 'QL02p007186' => 'qlo', 'QL02p033904' => 'qlo', 'QL03p064391' => 'qlo', 'QL05p040593' => 'qlo', 'QL05p058242' => 'qlo', 'QL08p021825' => 'qlo', 'QL11p004981' => 'qlo', 'RcHm_v2.0_Chr1g0318301' => 'rch', 'RcHm_v2.0_Chr4g0418501' => 'rch', 'RcHm_v2.0_Chr4g0439971' => 'rch', 'RcHm_v2.0_Chr5g0008541' => 'rch', 'RcHm_v2.0_Chr5g0014101' => 'rch', 'RcHm_v2.0_Chr5g0014131' => 'rch', 'RcHm_v2.0_Chr5g0033621' => 'rch', 'RcHm_v2.0_Chr6g0272041' => 'rch', 'RcHm_v2.0_Chr6g0278831' => 'rch', 'Rhsim02G0130400' => 'rsi', 'Rhsim02G0171100' => 'rsi', 'Rhsim05G0053000' => 'rsi', 'Rhsim05G0053100' => 'rsi', 'Rhsim06G0096500' => 'rsi', 'Rhsim06G0096600' => 'rsi', 'Rhsim06G0199100' => 'rsi', 'Rhsim12G0062300' => 'rsi', 'Rhsim12G0062800' => 'rsi', 'Sabra02G0118600' => 'sbr', 'Sabra04G0027300' => 'sbr', 'Sabra04G0119500' => 'sbr', 'Sabra08G0112500' => 'sbr', 'Sabra11G0036800' => 'sbr', 'Sabra11G0103800' => 'sbr', 'Sabra13G0096300' => 'sbr', 'Sabra16G0262300' => 'sbr', 'Sabra18G0091700' => 'sbr', 'Sabra19G0095400' => 'sbr', 'SalBow6G3080' => 'sbo', 'SalBow7G1157' => 'sbo', 'SalBow7G2123' => 'sbo', 'SalBow7G2285' => 'sbo', 'SalBow7G3537' => 'sbo', 'SalBow8G2947' => 'sbo', 'SalBow8G4463' => 'sbo', 'SalBow8G5466' => 'sbo', 'Sc01g0001750' => 'sci', 'Sc02g0006640' => 'sci', 'Sc02g0006670' => 'sci', 'Sc04g0008220' => 'sci', 'Sc05g0006190' => 'sci', 'Sc08g0002760' => 'sci', 'Sc17g0006170' => 'sci', 'Sc22g0002050' => 'sci', 'Sc23g0001190' => 'sci', 'Sc24g0000980' => 'sci', 'Sed0006245' => 'sed', 'Sed0007543' => 'sed', 'Sed0009411' => 'sed', 'Sed0010765' => 'sed', 'Sed0012944' => 'sed', 'Sed0014682' => 'sed', 'Sed0016174' => 'sed', 'Sed0016796' => 'sed', 'Sed0020317' => 'sed', 'Sed0021467' => 'sed', 'SEGI_01316' => 'sgi', 'SEGI_03374' => 'sgi', 'SEGI_16265' => 'sgi', 'SEGI_18569' => 'sgi', 'SEGI_20351' => 'sgi', 'SEGI_26395' => 'sgi', 'SEGI_29469' => 'sgi', 'SEGI_34771' => 'sgi', 'SEGI_36769' => 'sgi', 'SEGI_37139' => 'sgi', 'SGA_v2.0_scaffold100G29687' => 'sas', 'SGA_v2.0_scaffold118G32472' => 'sas', 'SGA_v2.0_scaffold14G07051' => 'sas', 'SGA_v2.0_scaffold183G39845' => 'sas', 'SGA_v2.0_scaffold1G00174' => 'sas', 'SGA_v2.0_scaffold22G09714' => 'sas', 'SGA_v2.0_scaffold333G48992' => 'sas', 'SGA_v2.0_scaffold46G17491' => 'sas', 'SGA_v2.0_scaffold49G18294' => 'sas', 'SGA_v2.0_scaffold63G21658' => 'sas', 'SHI01741' => 'shi', 'SHI05771' => 'shi', 'SHI18077' => 'shi', 'SHI20525' => 'shi', 'SHI20527' => 'shi', 'SHI20528' => 'shi', 'SMO172G0185' => 'smo', 'SMO198G0020' => 'smo', 'SMO351G0006' => 'smo', 'SMO356G0118' => 'smo', 'SMO358G0296' => 'smo', 'SMO367G0079' => 'smo', 'SMO367G1277' => 'smo', 'Solyc01g014220.3' => 'sly', 'Solyc01g111770.2' => 'sly', 'Solyc02g078180.3' => 'sly', 'Solyc03g006430.3' => 'sly', 'Solyc03g006456.1' => 'sly', 'Solyc03g079860.2' => 'sly', 'Solyc04g079770.3' => 'sly', 'Solyc05g007430.4' => 'sly', 'Solyc07g063150.3' => 'sly', 'Solyc08g016620.3' => 'sly', 'Solyc09g057590.3' => 'sly', 'Solyc09g057600.1' => 'sly', 'Solyc10g009050.3' => 'sly', 'Solyc11g017420.2' => 'sly', 'Sopen01g053810' => 'spe', 'Sopen02g023040' => 'spe', 'Sopen03g002440' => 'spe', 'Sopen04g033350' => 'spe', 'Sopen05g003310' => 'spe', 'Sopen07g004050' => 'spe', 'Sopen07g031340' => 'spe', 'Sopen08g006990' => 'spe', 'Sopen10g004830' => 'spe', 'Sopen11g009370' => 'spe', 'Sp1g24450' => 'spa', 'Sp1g29670' => 'spa', 'Sp1g39600' => 'spa', 'Sp2g11080' => 'spa', 'Sp2g13970' => 'spa', 'Sp4g16130' => 'spa', 'Sp6g13080' => 'spa', 'Sp7g37270' => 'spa', 'TAR371G0065' => 'tar', 'TAR376G0340' => 'tar', 'TAR376G0435' => 'tar', 'TAR381G0002' => 'tar', 'TAR381G1236' => 'tar', 'TAR624G0055' => 'tar', 'TAR624G0324' => 'tar', 'TAR624G0696' => 'tar', 'TAR624G0906' => 'tar', 'TAR625G0107' => 'tar', 'TAR626G0015' => 'tar', 'TAR626G1356' => 'tar', 'TAR627G0888' => 'tar', 'TAR628G0399' => 'tar', 'TAR628G1327' => 'tar', 'TAR629G2831' => 'tar', 'TAR629G2874' => 'tar', 'TAR633G1432' => 'tar', 'TAR633G2771' => 'tar', 'THA.LOC104803394' => 'tha', 'THA.LOC104805153' => 'tha', 'THA.LOC104806784' => 'tha', 'THA.LOC104810473' => 'tha', 'THA.LOC104813100' => 'tha', 'THA.LOC104814215' => 'tha', 'THA.LOC104815554' => 'tha', 'THA.LOC104820544' => 'tha', 'THA.LOC104824754' => 'tha', 'THA.LOC104827717' => 'tha', 'Thecc.02G031400' => 'tca', 'Thecc.02G055900' => 'tca', 'Thecc.02G350800' => 'tca', 'Thecc.06G150900' => 'tca', 'Thecc.06G186600' => 'tca', 'Thecc.07G089600' => 'tca', 'Thecc.08G020400' => 'tca', 'Thecc.08G182100' => 'tca', 'Thhalv10000873m.g' => 'esa', 'Thhalv10004185m.g' => 'esa', 'Thhalv10006981m.g' => 'esa', 'Thhalv10007204m.g' => 'esa', 'Thhalv10011374m.g' => 'esa', 'Thhalv10013482m.g' => 'esa', 'Thhalv10017801m.g' => 'esa', 'Thhalv10024983m.g' => 'esa', 'TPR.G12072' => 'tpr', 'TPR.G15769' => 'tpr', 'TPR.G16504' => 'tpr', 'TPR.G16506' => 'tpr', 'TPR.G24345' => 'tpr', 'TPR.G26666' => 'tpr', 'TPR.G27320' => 'tpr', 'TPR.G31819' => 'tpr', 'TPR.G38879' => 'tpr', 'TPR.G39015' => 'tpr', 'TPR.G8819' => 'tpr', 'TWI09G0924' => 'twi', 'TWI12G0811' => 'twi', 'TWI12G1294' => 'twi', 'TWI31G0150' => 'twi', 'TWI36G1262' => 'twi', 'TWI38G1287' => 'twi', 'TWI38G1633' => 'twi', 'TWI38G1982' => 'twi', 'TWI39G0116' => 'twi', 'TWI60G1011' => 'twi', 'TWI63G0171' => 'twi', 'TWI73G0839' => 'twi', 'TWI79G1511' => 'twi', 'unitig_0.g915' => 'ugi', 'unitig_0.g916' => 'ugi', 'unitig_21.g20219' => 'ugi', 'unitig_21.g20416' => 'ugi', 'unitig_578.g16132' => 'ugi', 'unitig_578.g16718' => 'ugi', 'unitig_62.g23481' => 'ugi', 'unitig_744.g24535' => 'ugi', 'unitig_749.g13525' => 'ugi', 'vmacro01248' => 'vma', 'vmacro02290' => 'vma', 'vmacro10946' => 'vma', 'vmacro11865' => 'vma', 'vmacro12493' => 'vma', 'vmacro17322' => 'vma', 'vmacro21599' => 'vma', 'vmacro23041' => 'vma', 'VMungo0251G0004' => 'vmu', 'VMungo0251G2639' => 'vmu', 'VMungo0251G2967' => 'vmu', 'VMungo0540G0864' => 'vmu', 'VMungo0540G1569' => 'vmu', 'VMungo0647G0317' => 'vmu', 'VMungo0720G1373' => 'vmu', 'VMungo0720G1508' => 'vmu', 'VMungo1080G0485' => 'vmu', 'VMungo1215G3177' => 'vmu', 'Zm00001eb112600' => 'zma', 'Zm00001eb120220' => 'zma', 'Zm00001eb153240' => 'zma', 'Zm00001eb168880' => 'zma', 'Zm00001eb213920' => 'zma', 'Zm00001eb228280' => 'zma', 'Zm00001eb254580' => 'zma', 'Zm00001eb272180' => 'zma', 'Zm00001eb293190' => 'zma', 'Zm00001eb322930' => 'zma', 'Zm00001eb353360' => 'zma', 'Zm00001eb353390' => 'zma', 'Zm00001eb353430' => 'zma', 'Zm00001eb353440' => 'zma', 'Zm00001eb353780' => 'zma' ) $gf_id = 'HOM05D000499' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000499' ) $data_identifier = 'HOM05D000499' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 29, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 12, 'amhyb' => (int) 8, 'aly' => (int) 12, 'aox' => (int) 9, 'arhy' => (int) 26, 'ath' => (int) 8, 'atr' => (int) 7, 'acertr' => (int) 10, 'cqu' => (int) 15, 'bca' => (int) 29, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 11, 'cansat' => (int) 8, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 9, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 8, 'cpa' => (int) 10, 'csa' => (int) 7, 'camsi' => (int) 20, 'dca' => (int) 8, 'din' => (int) 12, 'dzi' => (int) 14, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 6, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 38, 'gra' => (int) 16, 'vvi' => (int) 8, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 5, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 11, 'lja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 11, 'mpo' => (int) 3, 'mbi' => (int) 14, 'mdo' => (int) 14, 'mtr' => (int) 8, 'cme' => (int) 9, 'egut' => (int) 9, 'ama' => (int) 11, 'nta' => (int) 17, 'nnu' => (int) 11, 'oeu' => (int) 18, 'osa' => (int) 8, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 6, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 9, 'rsi' => (int) 9, 'sbr' => (int) 10, 'sbo' => (int) 8, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 10, 'sas' => (int) 10, 'shi' => (int) 6, 'smo' => (int) 7, 'sly' => (int) 14, 'spe' => (int) 10, 'spa' => (int) 8, 'tar' => (int) 19, 'tha' => (int) 10, 'tca' => (int) 8, 'esa' => (int) 8, 'tpr' => (int) 11, 'twi' => (int) 13, 'ugi' => (int) 9, 'vma' => (int) 8, 'vmu' => (int) 10, 'zma' => (int) 15 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb353780' $species_info = array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ) $local_species = 'cansat' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000499', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1066', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p29780' => 'bna', 'A02p33180' => 'bna', 'A03p16470' => 'bna', 'A03p66010' => 'bna', 'A04p25970' => 'bna', 'A06p01270' => 'bna', 'A06p46080' => 'bna', 'A07p11400' => 'bna', 'A08p01840' => 'bna', 'A08p08230' => 'bna', 'A08p25740' => 'bna', 'A09p32070' => 'bna', 'A09p37830' => 'bna', 'A09p42840' => 'bna', 'A09p42850' => 'bna', 'Aa31LG10G2060' => 'aar', 'Aa31LG2G7410' => 'aar', 'Aa31LG6G10200' => 'aar', 'Aa31LG6G16680' => 'aar', 'Aa31LG6G8470' => 'aar', 'Aa31LG9G12730' => 'aar', 'Aa31LG9G13680' => 'aar', 'Aa31LG9G14920' => 'aar', 'Aa31LG9G6650' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4977' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5467' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3254' => 'aag', 'Actinidia02578' => 'ach', 'Actinidia07693' => 'ach', 'Actinidia08413' => 'ach', 'Actinidia08414' => 'ach', 'Actinidia15289' => 'ach', 'Actinidia19871' => 'ach', 'Actinidia21475' => 'ach', 'Actinidia22576' => 'ach', 'Actinidia28327' => 'ach', 'Actinidia32491' => 'ach', 'Actinidia39463' => 'ach', 'Actinidia39571' => 'ach', 'Ah.01g013750' => 'amhyb', 'Ah.01g023210' => 'amhyb', 'Ah.04g164850' => 'amhyb', 'Ah.05g178060' => 'amhyb', 'Ah.07g204270' => 'amhyb', 'Ah.07g208480' => 'amhyb', 'Ah.09g237410' => 'amhyb', 'Ah.14g089460' => 'amhyb', 'AL1G41790' => 'aly', 'AL1G49050' => 'aly', 'AL1G53810' => 'aly', 'AL1G61400' => 'aly', 'AL4G18580' => 'aly', 'AL5G12510' => 'aly', 'AL5G12540' => 'aly', 'AL6G43230' => 'aly', 'AL7G10370' => 'aly', 'AL7G19250' => 'aly', 'AL8G12240' => 'aly', 'AL8G18540' => 'aly', 'Aqoxy1G02409' => 'aox', 'Aqoxy2G03993' => 'aox', 'Aqoxy3G03357' => 'aox', 'Aqoxy4G00785' => 'aox', 'Aqoxy5G02598' => 'aox', 'Aqoxy6G00132' => 'aox', 'Aqoxy7G01776' => 'aox', 'Aqoxy7G02316' => 'aox', 'Aqoxy7G03973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.12AFKW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B8730' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27IQR1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3F75VG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3RE0GA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41TCQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.527VTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FIR39' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5W8UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DA38EV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ63HS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H1I32C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HC27T5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4M8AP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7N3CZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9UVDZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LS1NQA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT1D4B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SKC4TM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCFV76' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF9Q1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQWD9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1ZM88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WE07RT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YCK7VH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJE6Q6' => 'arhy', 'AT1G28240' => 'ath', 'AT1G34550' => 'ath', 'AT1G53040' => 'ath', 'AT2G02910' => 'ath', 'AT4G09630' => 'ath', 'AT4G38500' => 'ath', 'AT5G42660' => 'ath', 'AT5G46220' => 'ath', 'ATR0152G026' => 'atr', 'ATR0564G343' => 'atr', 'ATR0706G151' => 'atr', 'ATR0733G207' => 'atr', 'ATR0751G234' => 'atr', 'ATR0807G048' => 'atr', 'ATR1091G084' => 'atr', 'Atru.chr10.1229' => 'acertr', 'Atru.chr10.1230' => 'acertr', 'Atru.chr10.1874' => 'acertr', 'Atru.chr11.1808' => 'acertr', 'Atru.chr13.1795' => 'acertr', 'Atru.chr13.570' => 'acertr', 'Atru.chr2.2608' => 'acertr', 'Atru.chr2.2609' => 'acertr', 'Atru.chr5.3428' => 'acertr', 'Atru.chr8.1171' => 'acertr', 'AUR62004651' => 'cqu', 'AUR62008675' => 'cqu', 'AUR62010014' => 'cqu', 'AUR62013004' => 'cqu', 'AUR62014825' => 'cqu', 'AUR62015015' => 'cqu', 'AUR62015151' => 'cqu', 'AUR62017020' => 'cqu', 'AUR62019422' => 'cqu', 'AUR62023570' => 'cqu', 'AUR62025571' => 'cqu', 'AUR62029098' => 'cqu', 'AUR62033863' => 'cqu', 'AUR62034296' => 'cqu', 'AUR62040075' => 'cqu', 'BcaB02g07334' => 'bca', 'BcaB02g10575' => 'bca', 'BcaB03g12119' => 'bca', 'BcaB03g12120' => 'bca', 'BcaB03g13945' => 'bca', 'BcaB04g17123' => 'bca', 'BcaB04g17867' => 'bca', 'BcaB04g19839' => 'bca', 'BcaB07g30317' => 'bca', 'BcaB07g32432' => 'bca', 'BcaB07g33362' => 'bca', 'BcaB08g36611' => 'bca', 'BcaC01g00028' => 'bca', 'BcaC01g01356' => 'bca', 'BcaC01g02034' => 'bca', 'BcaC01g06051' => 'bca', 'BcaC03g16839' => 'bca', 'BcaC03g17176' => 'bca', 'BcaC05g26829' => 'bca', 'BcaC06g31490' => 'bca', 'BcaC06g35344' => 'bca', 'BcaC06g36570' => 'bca', 'BcaC07g37537' => 'bca', 'BcaC08g43491' => 'bca', 'BcaC08g43773' => 'bca', 'BcaNung00234' => 'bca', 'BcaNung01982' => 'bca', 'BcaNung03707' => 'bca', 'BcaNung06454' => 'bca', 'BolC2t10762H' => 'bol', 'BolC2t11191H' => 'bol', 'BolC3t14322H' => 'bol', 'BolC3t19747H' => 'bol', 'BolC3t21425H' => 'bol', 'BolC4t27800H' => 'bol', 'BolC5t31423H' => 'bol', 'BolC6t35951H' => 'bol', 'BolC6t36282H' => 'bol', 'BolC7t40678H' => 'bol', 'BolC7t40679H' => 'bol', 'BolC7t42222H' => 'bol', 'BolC7t43492H' => 'bol', 'BolC7t46785H' => 'bol', 'BolC8t47853H' => 'bol', 'BolC9t56805H' => 'bol', 'BraA02t08000Z' => 'bra', 'BraA02t08341Z' => 'bra', 'BraA03t10936Z' => 'bra', 'BraA03t15657Z' => 'bra', 'BraA04t18100Z' => 'bra', 'BraA05t20523Z' => 'bra', 'BraA06t23353Z' => 'bra', 'BraA06t27473Z' => 'bra', 'BraA06t27769Z' => 'bra', 'BraA07t28928Z' => 'bra', 'BraA08t32236Z' => 'bra', 'BraA08t32841Z' => 'bra', 'BraA08t34524Z' => 'bra', 'BraA09t38742Z' => 'bra', 'BraA09t39295Z' => 'bra', 'C02p47180' => 'bna', 'C02p50990' => 'bna', 'C03p19360' => 'bna', 'C03p74950' => 'bna', 'C03p91000' => 'bna', 'C04p63260' => 'bna', 'C05p27050' => 'bna', 'C06p08750' => 'bna', 'C06p11490' => 'bna', 'C07p02820' => 'bna', 'C07p17180' => 'bna', 'C07p29440' => 'bna', 'C07p63730' => 'bna', 'C09p39260' => 'bna', 'CAN.G1164.34' => 'can', 'CAN.G1164.39' => 'can', 'CAN.G1530.3' => 'can', 'CAN.G162.61' => 'can', 'CAN.G176.6' => 'can', 'CAN.G289.49' => 'can', 'CAN.G370.21' => 'can', 'CAN.G370.22' => 'can', 'CAN.G371.117' => 'can', 'CAN.G58.37' => 'can', 'CAN.G588.98' => 'can', 'CANSAT21G2266' => 'cansat', 'CANSAT25G2799' => 'cansat', 'CANSAT35G0862' => 'cansat', 'CANSAT35G1704' => 'cansat', 'CANSAT35G1760' => 'cansat', 'CANSAT56G3971' => 'cansat', 'CANSAT56G4116' => 'cansat', 'CANSAT80G1259' => 'cansat', 'CARHR027730' => 'chi', 'CARHR033880' => 'chi', 'CARHR043270' => 'chi', 'CARHR145330' => 'chi', 'CARHR145340' => 'chi', 'CARHR175570' => 'chi', 'CARHR181570' => 'chi', 'CARHR258470' => 'chi', 'CARHR260490' => 'chi', 'CARHR294220' => 'chi', 'Carub.0001s2668' => 'cru', 'Carub.0001s3257' => 'cru', 'Carub.0001s4220' => 'cru', 'Carub.0005s0179' => 'cru', 'Carub.0006s2807' => 'cru', 'Carub.0007s0039' => 'cru', 'Carub.0008s0169' => 'cru', 'Carub.0008s0636' => 'cru', 'Ca_00338_v3' => 'car', 'Ca_00542_v3' => 'car', 'Ca_01844_v3' => 'car', 'Ca_10611_v3' => 'car', 'Ca_13326_v3' => 'car', 'Ca_17944_v3' => 'car', 'Ca_18546_v3' => 'car', 'Ca_24219_v3' => 'car', 'Ca_29972_v3' => 'car', 'CBR_g3681' => 'cbr', 'CBR_g40021' => 'cbr', 'Cc01_g08140' => 'ccan', 'Cc02_g13410' => 'ccan', 'Cc02_g37480' => 'ccan', 'Cc05_g12030' => 'ccan', 'Cc09_g03370' => 'ccan', 'Cc09_g10300' => 'ccan', 'Cc10_g03530' => 'ccan', 'Cc10_g11380' => 'ccan', 'CDE01G0176' => 'cde', 'CDE02G0675' => 'cde', 'CDE02G0942' => 'cde', 'CDE02G1153' => 'cde', 'CDE02G4177' => 'cde', 'CDE04G2117' => 'cde', 'CDE04G2736' => 'cde', 'CDE08G1161' => 'cde', 'CDE09G1238' => 'cde', 'Cfa000467' => 'cfa', 'Cfa000947' => 'cfa', 'Cfa004969' => 'cfa', 'Cfa005284' => 'cfa', 'Cfa008993' => 'cfa', 'Cfa018187' => 'cfa', 'Cfa018454' => 'cfa', 'Cfa020585' => 'cfa', 'Ciclev10000424m.g' => 'ccl', 'Ciclev10003605m.g' => 'ccl', 'Ciclev10007828m.g' => 'ccl', 'Ciclev10014620m.g' => 'ccl', 'Ciclev10015169m.g' => 'ccl', 'Ciclev10018291m.g' => 'ccl', 'Ciclev10028256m.g' => 'ccl', 'Ciclev10033822m.g' => 'ccl', 'CiPaw.05G060300' => 'cil', 'CiPaw.05G085000' => 'cil', 'CiPaw.06G083700' => 'cil', 'CiPaw.06G120300' => 'cil', 'CiPaw.09G060500' => 'cil', 'CiPaw.09G123800' => 'cil', 'CiPaw.11G169700' => 'cil', 'CiPaw.12G118300' => 'cil', 'CiPaw.15G071000' => 'cil', 'CiPaw.15G081900' => 'cil', 'ClCG01G024610' => 'cla', 'ClCG03G006070' => 'cla', 'ClCG05G019250' => 'cla', 'ClCG09G009500' => 'cla', 'ClCG11G008200' => 'cla', 'ClCG11G018080' => 'cla', 'COL.COLO4_17373' => 'col', 'COL.COLO4_22994' => 'col', 'COL.COLO4_26389' => 'col', 'COL.COLO4_27170' => 'col', 'COL.COLO4_31074' => 'col', 'COL.COLO4_31465' => 'col', 'COL.COLO4_36438' => 'col', 'COL.COLO4_36439' => 'col', 'Cpa.g.c38781' => 'cpa', 'Cpa.g.sc128.12' => 'cpa', 'Cpa.g.sc166.7' => 'cpa', 'Cpa.g.sc166.8' => 'cpa', 'Cpa.g.sc20.111' => 'cpa', 'Cpa.g.sc27.31' => 'cpa', 'Cpa.g.sc64.36' => 'cpa', 'Cpa.g.sc64.37' => 'cpa', 'Cpa.g.sc66.49' => 'cpa', 'Cpa.g.sc80.64' => 'cpa', 'CsaV3_1G012320' => 'csa', 'CsaV3_2G008480' => 'csa', 'CsaV3_2G033450' => 'csa', 'CsaV3_3G044830' => 'csa', 'CsaV3_4G033710' => 'csa', 'CsaV3_6G051730' => 'csa', 'CsaV3_7G025350' => 'csa', 'CSS0001067' => 'camsi', 'CSS0005996' => 'camsi', 'CSS0006590' => 'camsi', 'CSS0009673' => 'camsi', 'CSS0010201' => 'camsi', 'CSS0010549' => 'camsi', 'CSS0011364' => 'camsi', 'CSS0014473' => 'camsi', 'CSS0014961' => 'camsi', 'CSS0020191' => 'camsi', 'CSS0021165' => 'camsi', 'CSS0022306' => 'camsi', 'CSS0030591' => 'camsi', 'CSS0030696' => 'camsi', 'CSS0032653' => 'camsi', 'CSS0037487' => 'camsi', 'CSS0041102' => 'camsi', 'CSS0041261' => 'camsi', 'CSS0046246' => 'camsi', 'CSS0049256' => 'camsi', 'DCAR_004075' => 'dca', 'DCAR_011538' => 'dca', 'DCAR_019553' => 'dca', 'DCAR_020952' => 'dca', 'DCAR_021739' => 'dca', 'DCAR_027407' => 'dca', 'DCAR_027913' => 'dca', 'DCAR_028066' => 'dca', 'Dinv05899' => 'din', 'Dinv07563' => 'din', 'Dinv08010' => 'din', 'Dinv14125' => 'din', 'Dinv20172' => 'din', 'Dinv30743' => 'din', 'Dinv31229' => 'din', 'Dinv34162' => 'din', 'Dinv36028' => 'din', 'Dinv39368' => 'din', 'Dinv40565' => 'din', 'Dinv41706' => 'din', 'Duzib052G0089' => 'dzi', 'Duzib116G0641' => 'dzi', 'Duzib132G0069' => 'dzi', 'Duzib132G1219' => 'dzi', 'Duzib147G0278' => 'dzi', 'Duzib160G0480' => 'dzi', 'Duzib170G0661' => 'dzi', 'Duzib177G0591' => 'dzi', 'Duzib187G1353' => 'dzi', 'Duzib192G0858' => 'dzi', 'Duzib192G0883' => 'dzi', 'Duzib213G0506' => 'dzi', 'Duzib235G0289' => 'dzi', 'Duzib251G0422' => 'dzi', 'ECA232G3898' => 'eca', 'ECA233G5950' => 'eca', 'ECA234G1699' => 'eca', 'ECA234G2421' => 'eca', 'ECA236G0426' => 'eca', 'ECA236G4331' => 'eca', 'ECA248G2573' => 'eca', 'EL10Ac1g00077' => 'bvu', 'EL10Ac1g01746' => 'bvu', 'EL10Ac2g03464' => 'bvu', 'EL10Ac4g08176' => 'bvu', 'EL10Ac7g17521' => 'bvu', 'EL10Ac8g20386' => 'bvu', 'EL10Ac9g21343' => 'bvu', 'EL10Ac9g22688' => 'bvu', 'Eucgr.B03434' => 'egr', 'Eucgr.D00618' => 'egr', 'Eucgr.E02395' => 'egr', 'Eucgr.F01129' => 'egr', 'Eucgr.F02622' => 'egr', 'Eucgr.F04207' => 'egr', 'FAN01G0570' => 'fan', 'FAN03G3351' => 'fan', 'FAN06G3702' => 'fan', 'FAN07G2149' => 'fan', 'FAN10G3758' => 'fan', 'FAN11G1170' => 'fan', 'FAN11G2050' => 'fan', 'FAN11G2724' => 'fan', 'FAN12G1700' => 'fan', 'FAN12G2028' => 'fan', 'FAN15G1160' => 'fan', 'FAN15G3063' => 'fan', 'FAN16G2540' => 'fan', 'FAN16G3077' => 'fan', 'FAN16G3624' => 'fan', 'FAN17G0221' => 'fan', 'FAN20G2492' => 'fan', 'FAN20G2905' => 'fan', 'FAN21G0548' => 'fan', 'FAN21G1300' => 'fan', 'FAN22G0077' => 'fan', 'FAN22G1315' => 'fan', 'FAN24G1280' => 'fan', 'FAN24G1445' => 'fan', 'FAN24G3527' => 'fan', 'FAN25G0464' => 'fan', 'FAN25G2885' => 'fan', 'FAN25G3270' => 'fan', 'FAN27G1101' => 'fan', 'FAN27G2846' => 'fan', 'FAN27G3524' => 'fan', 'FvH4_2g11770' => 'fve', 'FvH4_2g15630' => 'fve', 'FvH4_3g05570' => 'fve', 'FvH4_3g09110' => 'fve', 'FvH4_3g19940' => 'fve', 'FvH4_4g04821' => 'fve', 'FvH4_4g31480' => 'fve', 'FvH4_7g01740' => 'fve', 'Glyma.05G130400' => 'gma', 'Glyma.05G156400' => 'gma', 'Glyma.07G197000' => 'gma', 'Glyma.08G085151' => 'gma', 'Glyma.08G114500' => 'gma', 'Glyma.08G300400' => 'gma', 'Glyma.10G215800' => 'gma', 'Glyma.12G224400' => 'gma', 'Glyma.13G179300' => 'gma', 'Glyma.13G218151' => 'gma', 'Glyma.13G238800' => 'gma', 'Glyma.13G276900' => 'gma', 'Glyma.14G078200' => 'gma', 'Glyma.15G074500' => 'gma', 'Glyma.15G094100' => 'gma', 'Glyma.17G247200' => 'gma', 'Glyma.18G120100' => 'gma', 'Glyma.20G176000' => 'gma', 'Gohir.A01G063600' => 'ghi', 'Gohir.A01G170301' => 'ghi', 'Gohir.A02G060500' => 'ghi', 'Gohir.A05G133850' => 'ghi', 'Gohir.A05G161400' => 'ghi', 'Gohir.A06G012900' => 'ghi', 'Gohir.A06G035901' => 'ghi', 'Gohir.A06G127100' => 'ghi', 'Gohir.A06G210500' => 'ghi', 'Gohir.A08G008650' => 'ghi', 'Gohir.A09G072700' => 'ghi', 'Gohir.A09G088301' => 'ghi', 'Gohir.A10G040600' => 'ghi', 'Gohir.A12G036300' => 'ghi', 'Gohir.A12G143350' => 'ghi', 'Gohir.A12G165500' => 'ghi', 'Gohir.A13G145700' => 'ghi', 'Gohir.D01G050000' => 'ghi', 'Gohir.D01G051366' => 'ghi', 'Gohir.D01G161350' => 'ghi', 'Gohir.D02G065900' => 'ghi', 'Gohir.D05G164200' => 'ghi', 'Gohir.D05G355500' => 'ghi', 'Gohir.D06G010400' => 'ghi', 'Gohir.D06G111250' => 'ghi', 'Gohir.D06G132000' => 'ghi', 'Gohir.D06G210500' => 'ghi', 'Gohir.D07G165675' => 'ghi', 'Gohir.D08G062240' => 'ghi', 'Gohir.D08G086101' => 'ghi', 'Gohir.D08G138060' => 'ghi', 'Gohir.D09G072300' => 'ghi', 'Gohir.D10G041400' => 'ghi', 'Gohir.D11G191020' => 'ghi', 'Gohir.D11G212066' => 'ghi', 'Gohir.D12G036300' => 'ghi', 'Gohir.D12G168600' => 'ghi', 'Gohir.D13G150600' => 'ghi', 'Gorai.001G057300' => 'gra', 'Gorai.002G069900' => 'gra', 'Gorai.002G200000' => 'gra', 'Gorai.003G067600' => 'gra', 'Gorai.005G074800' => 'gra', 'Gorai.006G087300' => 'gra', 'Gorai.008G037500' => 'gra', 'Gorai.008G181400' => 'gra', 'Gorai.009G169400' => 'gra', 'Gorai.009G387900' => 'gra', 'Gorai.010G013300' => 'gra', 'Gorai.010G153800' => 'gra', 'Gorai.010G255800' => 'gra', 'Gorai.011G043700' => 'gra', 'Gorai.011G198900' => 'gra', 'Gorai.013G168400' => 'gra', 'GSVIVG01005212001' => 'vvi', 'GSVIVG01006163001' => 'vvi', 'GSVIVG01009625001' => 'vvi', 'GSVIVG01014338001' => 'vvi', 'GSVIVG01020005001' => 'vvi', 'GSVIVG01021450001' => 'vvi', 'GSVIVG01023975001' => 'vvi', 'GSVIVG01034490001' => 'vvi', 'HanXRQChr04g0112071' => 'han', 'HanXRQChr05g0131151' => 'han', 'HanXRQChr09g0262371' => 'han', 'HanXRQChr09g0268401' => 'han', 'HanXRQChr10g0279241' => 'han', 'HanXRQChr10g0297961' => 'han', 'HanXRQChr11g0326231' => 'han', 'HanXRQChr11g0328471' => 'han', 'HanXRQChr16g0507941' => 'han', 'HanXRQChr17g0560211' => 'han', 'Haze_02108' => 'cav', 'Haze_02428' => 'cav', 'Haze_05593' => 'cav', 'Haze_06448' => 'cav', 'Haze_09427' => 'cav', 'Haze_12022' => 'cav', 'Haze_17612' => 'cav', 'Haze_17928' => 'cav', 'Hma1.2p1_0032F.1_g019250' => 'hma', 'Hma1.2p1_0163F.1_g072690' => 'hma', 'Hma1.2p1_0265F.1_g106710' => 'hma', 'Hma1.2p1_0286F.1_g113970' => 'hma', 'Hma1.2p1_0363F.1_g136640' => 'hma', 'Hma1.2p1_0584F.1_g183470' => 'hma', 'Hma1.2p1_0885F.1_g232570' => 'hma', 'HPP92_006022' => 'vpl', 'HPP92_007320' => 'vpl', 'HPP92_011521' => 'vpl', 'HPP92_019387' => 'vpl', 'HPP92_024038' => 'vpl', 'Hund05891' => 'sun', 'Hund06450' => 'sun', 'Hund12053' => 'sun', 'Hund16800' => 'sun', 'Hund21222' => 'sun', 'Hund22896' => 'sun', 'Hund23746' => 'sun', 'Hund27083' => 'sun', 'Lalb_Chr02g0141831' => 'lal', 'Lalb_Chr02g0141841' => 'lal', 'Lalb_Chr05g0220411' => 'lal', 'Lalb_Chr06g0162081' => 'lal', 'Lalb_Chr09g0327651' => 'lal', 'Lalb_Chr13g0295051' => 'lal', 'Lalb_Chr15g0086801' => 'lal', 'Lalb_Chr16g0383781' => 'lal', 'Lalb_Chr16g0383791' => 'lal', 'Lalb_Chr18g0055441' => 'lal', 'Lalb_Chr18g0059611' => 'lal', 'Lalb_Chr20g0109661' => 'lal', 'Lalb_Chr20g0109831' => 'lal', 'Lalb_Chr20g0121871' => 'lal', 'Lalb_Chr22g0355361' => 'lal', 'Lalb_Chr25g0286371' => 'lal', 'Lj1A1187G43' => 'lonja', 'Lj1A1205T50' => 'lonja', 'Lj1A800G33' => 'lonja', 'Lj1C1187T7' => 'lonja', 'Lj1C843T11' => 'lonja', 'Lj1g0010940' => 'lja', 'Lj2A288T69' => 'lonja', 'Lj3g0024276' => 'lja', 'Lj4A47T76' => 'lonja', 'Lj4g0005805' => 'lja', 'Lj4g0006097' => 'lja', 'Lj4g0008528' => 'lja', 'Lj4g0024907' => 'lja', 'Lj5g0012472' => 'lja', 'Lj5g0018648' => 'lja', 'Lj6C789G1' => 'lonja', 'Lj6g0004000' => 'lja', 'Lj7A292G67' => 'lonja', 'Lj7A292T64' => 'lonja', 'Lj9A400T58' => 'lonja', 'Lsat_1_v5_gn_1_126181' => 'lsa', 'Lsat_1_v5_gn_4_123041' => 'lsa', 'Lsat_1_v5_gn_4_133620' => 'lsa', 'Lsat_1_v5_gn_4_53221' => 'lsa', 'Lsat_1_v5_gn_4_71961' => 'lsa', 'Lsat_1_v5_gn_7_105241' => 'lsa', 'Lsat_1_v5_gn_7_21361' => 'lsa', 'Lsat_1_v5_gn_7_28860' => 'lsa', 'Lsat_1_v5_gn_7_31260' => 'lsa', 'Lsat_1_v5_gn_8_52801' => 'lsa', 'Manes.02G191400' => 'mes', 'Manes.03G110100' => 'mes', 'Manes.04G071100' => 'mes', 'Manes.05G100500' => 'mes', 'Manes.05G164700' => 'mes', 'Manes.15G087000' => 'mes', 'Manes.15G121500' => 'mes', 'Manes.16G028300' => 'mes', 'Manes.17G046100' => 'mes', 'Manes.17G069800' => 'mes', 'Manes.18G100500' => 'mes', 'Mapoly0002s0109' => 'mpo', 'Mapoly0024s0007' => 'mpo', 'Mapoly0089s0032' => 'mpo', 'MBI04_g42241_MAGBIO' => 'mbi', 'MBI05_g11988_MAGBIO' => 'mbi', 'MBI05_g35452_MAGBIO' => 'mbi', 'MBI07_g30179_MAGBIO' => 'mbi', 'MBI07_g35859_MAGBIO' => 'mbi', 'MBI07_g35860_MAGBIO' => 'mbi', 'MBI07_g37166_MAGBIO' => 'mbi', 'MBI08_g18172_MAGBIO' => 'mbi', 'MBI09_g08441_MAGBIO' => 'mbi', 'MBI13_g01676_MAGBIO' => 'mbi', 'MBI14_g42955_MAGBIO' => 'mbi', 'MBI16_g13161_MAGBIO' => 'mbi', 'MBI17_g27204_MAGBIO' => 'mbi', 'MBI19_g21595_MAGBIO' => 'mbi', 'MD00G1148400' => 'mdo', 'MD02G1301200' => 'mdo', 'MD03G1227800' => 'mdo', 'MD05G1041100' => 'mdo', 'MD05G1124800' => 'mdo', 'MD05G1284000' => 'mdo', 'MD05G1338800' => 'mdo', 'MD05G1338900' => 'mdo', 'MD07G1022800' => 'mdo', 'MD10G1047500' => 'mdo', 'MD10G1127500' => 'mdo', 'MD10G1262300' => 'mdo', 'MD10G1293800' => 'mdo', 'MD16G1074300' => 'mdo', 'Medtr1g021670' => 'mtr', 'Medtr1g096320' => 'mtr', 'Medtr2g013690' => 'mtr', 'Medtr2g019450' => 'mtr', 'Medtr2g085170' => 'mtr', 'Medtr4g088785' => 'mtr', 'Medtr8g055930' => 'mtr', 'Medtr8g085850' => 'mtr', 'MELO3C002605.2' => 'cme', 'MELO3C003891.2' => 'cme', 'MELO3C004012.2' => 'cme', 'MELO3C007134.2' => 'cme', 'MELO3C008118.2' => 'cme', 'MELO3C016700.2' => 'cme', 'MELO3C024127.2' => 'cme', 'MELO3C033361.2' => 'cme', 'MELO3C033362.2' => 'cme', 'Migut.C00430' => 'egut', 'Migut.C01246' => 'egut', 'Migut.E00101' => 'egut', 'Migut.H01486' => 'egut', 'Migut.H01939' => 'egut', 'Migut.K00360' => 'egut', 'Migut.M00910' => 'egut', 'Migut.M01139' => 'egut', 'Migut.N02677' => 'egut', 'MSTRG.13252' => 'ama', 'MSTRG.14701' => 'ama', 'MSTRG.1521' => 'ama', 'MSTRG.15884' => 'ama', 'MSTRG.16242' => 'ama', 'MSTRG.22285' => 'ama', 'MSTRG.22444' => 'ama', 'MSTRG.2349' => 'ama', 'MSTRG.26308' => 'ama', 'MSTRG.28296' => 'ama', 'MSTRG.9895' => 'ama', 'Nitab4.5_0000110g0060' => 'nta', 'Nitab4.5_0000420g0130' => 'nta', 'Nitab4.5_0000422g0030' => 'nta', 'Nitab4.5_0000560g0180' => 'nta', 'Nitab4.5_0000703g0100' => 'nta', 'Nitab4.5_0000786g0200' => 'nta', 'Nitab4.5_0001336g0020' => 'nta', 'Nitab4.5_0001796g0030' => 'nta', 'Nitab4.5_0003348g0060' => 'nta', 'Nitab4.5_0003698g0040' => 'nta', 'Nitab4.5_0003942g0090' => 'nta', 'Nitab4.5_0004775g0070' => 'nta', 'Nitab4.5_0004864g0030' => 'nta', 'Nitab4.5_0005615g0020' => 'nta', 'Nitab4.5_0009288g0030' => 'nta', 'Nitab4.5_0009341g0010' => 'nta', 'Nitab4.5_0009535g0010' => 'nta', 'Nn1g03995' => 'nnu', 'Nn1g04100' => 'nnu', 'Nn1g06530' => 'nnu', 'Nn3g16404' => 'nnu', 'Nn3g17212' => 'nnu', 'Nn3g20776' => 'nnu', 'Nn3g21923' => 'nnu', 'Nn5g27737' => 'nnu', 'Nn5g29461' => 'nnu', 'Nn7g38355' => 'nnu', 'Nn8g39873' => 'nnu', 'Oeu000548.2' => 'oeu', 'Oeu004672.1' => 'oeu', 'Oeu015605.2' => 'oeu', 'Oeu016092.1' => 'oeu', 'Oeu017879.3' => 'oeu', 'Oeu024910.1' => 'oeu', 'Oeu028965.1' => 'oeu', 'Oeu031269.1' => 'oeu', 'Oeu031270.1' => 'oeu', 'Oeu032535.1' => 'oeu', 'Oeu034151.1' => 'oeu', 'Oeu034152.1' => 'oeu', 'Oeu034588.2' => 'oeu', 'Oeu050846.1' => 'oeu', 'Oeu050849.2' => 'oeu', 'Oeu051063.2' => 'oeu', 'Oeu052368.1' => 'oeu', 'Oeu052370.1' => 'oeu', 'Os01g0210400' => 'osa', 'Os01g0304300' => 'osa', 'Os01g0749100' => 'osa', 'Os02g0745800' => 'osa', 'Os03g0769050' => 'osa', 'Os05g0531500' => 'osa', 'Os06g0724300' => 'osa', 'Os11g0198100' => 'osa', 'Peaxi162Scf00069g01425' => 'pax', 'Peaxi162Scf00280g00811' => 'pax', 'Peaxi162Scf00310g00615' => 'pax', 'Peaxi162Scf00362g00542' => 'pax', 'Peaxi162Scf00461g00310' => 'pax', 'Peaxi162Scf00530g00118' => 'pax', 'Peaxi162Scf00541g00057' => 'pax', 'Peaxi162Scf00661g00017' => 'pax', 'Peaxi162Scf00926g00027' => 'pax', 'Peaxi162Scf01064g00263' => 'pax', 'Peaxi162Scf01211g00135' => 'pax', 'PGR004G2336' => 'pgr', 'PGR042G0327' => 'pgr', 'PGR042G1957' => 'pgr', 'PGR042G2003' => 'pgr', 'PGR042G3929' => 'pgr', 'PGR083G1137' => 'pgr', 'PGR083G1364' => 'pgr', 'PGSC0003DMG400003381' => 'stu', 'PGSC0003DMG400003417' => 'stu', 'PGSC0003DMG400008981' => 'stu', 'PGSC0003DMG400012417' => 'stu', 'PGSC0003DMG400012823' => 'stu', 'PGSC0003DMG400016885' => 'stu', 'PGSC0003DMG400022812' => 'stu', 'PGSC0003DMG400029726' => 'stu', 'PGSC0003DMG401009243' => 'stu', 'PGSC0003DMG401031505' => 'stu', 'PGSC0003DMG402031505' => 'stu', 'Phvul.001G017600' => 'pvu', 'Phvul.002G193500' => 'pvu', 'Phvul.002G228900' => 'pvu', 'Phvul.002G236800' => 'pvu', 'Phvul.003G049500' => 'pvu', 'Phvul.005G072000' => 'pvu', 'Phvul.006G164800' => 'pvu', 'Phvul.006G185100' => 'pvu', 'Phvul.007G090000' => 'pvu', 'Potri.001G399800' => 'ptr', 'Potri.002G149900' => 'ptr', 'Potri.004G044100' => 'ptr', 'Potri.004G177600' => 'ptr', 'Potri.009G138000' => 'ptr', 'Potri.010G094000' => 'ptr', 'Potri.011G053000' => 'ptr', 'Potri.011G119300' => 'ptr', 'Potri.013G113700' => 'ptr', 'Potri.018G107800' => 'ptr', 'Potri.019G084100' => 'ptr', 'Pp3c14_23720' => 'ppa', 'Pp3c16_6340' => 'ppa', 'Pp3c23_13420' => 'ppa', 'Pp3c24_2740' => 'ppa', 'Pp3c25_860' => 'ppa', 'Pp3c8_21750' => 'ppa', 'Prupe.1G273000' => 'ppe', 'Prupe.1G273700' => 'ppe', 'Prupe.1G274100' => 'ppe', 'Prupe.2G023300' => 'ppe', 'Prupe.4G048000' => 'ppe', 'Prupe.4G080400' => 'ppe', 'Prupe.4G181200' => 'ppe', 'Prupe.8G056900' => 'ppe', 'Prupe.8G168700' => 'ppe', 'Psat1g189080' => 'psa', 'Psat1g204760' => 'psa', 'Psat4g175560' => 'psa', 'Psat4g177720' => 'psa', 'Psat5g244240' => 'psa', 'Psat6g010720' => 'psa', 'Psat6g187200' => 'psa', 'Psat7g072040' => 'psa', 'PSO017G3501' => 'pso', 'PSO063G2148' => 'pso', 'PSO063G5608' => 'pso', 'PSO210G6392' => 'pso', 'PSO541G2319' => 'pso', 'PSO541G2836' => 'pso', 'PSO541G4012' => 'pso', 'PSO541G6253' => 'pso', 'PSO675G0580' => 'pso', 'PSO675G0856' => 'pso', 'PSO675G5635' => 'pso', 'PSO675G9157' => 'pso', 'PSO832G1660' => 'pso', 'PSO832G1969' => 'pso', 'QL02p007186' => 'qlo', 'QL02p033904' => 'qlo', 'QL03p064391' => 'qlo', 'QL05p040593' => 'qlo', 'QL05p058242' => 'qlo', 'QL08p021825' => 'qlo', 'QL11p004981' => 'qlo', 'RcHm_v2.0_Chr1g0318301' => 'rch', 'RcHm_v2.0_Chr4g0418501' => 'rch', 'RcHm_v2.0_Chr4g0439971' => 'rch', 'RcHm_v2.0_Chr5g0008541' => 'rch', 'RcHm_v2.0_Chr5g0014101' => 'rch', 'RcHm_v2.0_Chr5g0014131' => 'rch', 'RcHm_v2.0_Chr5g0033621' => 'rch', 'RcHm_v2.0_Chr6g0272041' => 'rch', 'RcHm_v2.0_Chr6g0278831' => 'rch', 'Rhsim02G0130400' => 'rsi', 'Rhsim02G0171100' => 'rsi', 'Rhsim05G0053000' => 'rsi', 'Rhsim05G0053100' => 'rsi', 'Rhsim06G0096500' => 'rsi', 'Rhsim06G0096600' => 'rsi', 'Rhsim06G0199100' => 'rsi', 'Rhsim12G0062300' => 'rsi', 'Rhsim12G0062800' => 'rsi', 'Sabra02G0118600' => 'sbr', 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'Solyc03g079860.2' => 'sly', 'Solyc04g079770.3' => 'sly', 'Solyc05g007430.4' => 'sly', 'Solyc07g063150.3' => 'sly', 'Solyc08g016620.3' => 'sly', 'Solyc09g057590.3' => 'sly', 'Solyc09g057600.1' => 'sly', 'Solyc10g009050.3' => 'sly', 'Solyc11g017420.2' => 'sly', 'Sopen01g053810' => 'spe', 'Sopen02g023040' => 'spe', 'Sopen03g002440' => 'spe', 'Sopen04g033350' => 'spe', 'Sopen05g003310' => 'spe', 'Sopen07g004050' => 'spe', 'Sopen07g031340' => 'spe', 'Sopen08g006990' => 'spe', 'Sopen10g004830' => 'spe', 'Sopen11g009370' => 'spe', 'Sp1g24450' => 'spa', 'Sp1g29670' => 'spa', 'Sp1g39600' => 'spa', 'Sp2g11080' => 'spa', 'Sp2g13970' => 'spa', 'Sp4g16130' => 'spa', 'Sp6g13080' => 'spa', 'Sp7g37270' => 'spa', 'TAR371G0065' => 'tar', 'TAR376G0340' => 'tar', 'TAR376G0435' => 'tar', 'TAR381G0002' => 'tar', 'TAR381G1236' => 'tar', 'TAR624G0055' => 'tar', 'TAR624G0324' => 'tar', 'TAR624G0696' => 'tar', 'TAR624G0906' => 'tar', 'TAR625G0107' => 'tar', 'TAR626G0015' => 'tar', 'TAR626G1356' => 'tar', 'TAR627G0888' => 'tar', 'TAR628G0399' => 'tar', 'TAR628G1327' => 'tar', 'TAR629G2831' => 'tar', 'TAR629G2874' => 'tar', 'TAR633G1432' => 'tar', 'TAR633G2771' => 'tar', 'THA.LOC104803394' => 'tha', 'THA.LOC104805153' => 'tha', 'THA.LOC104806784' => 'tha', 'THA.LOC104810473' => 'tha', 'THA.LOC104813100' => 'tha', 'THA.LOC104814215' => 'tha', 'THA.LOC104815554' => 'tha', 'THA.LOC104820544' => 'tha', 'THA.LOC104824754' => 'tha', 'THA.LOC104827717' => 'tha', 'Thecc.02G031400' => 'tca', 'Thecc.02G055900' => 'tca', 'Thecc.02G350800' => 'tca', 'Thecc.06G150900' => 'tca', 'Thecc.06G186600' => 'tca', 'Thecc.07G089600' => 'tca', 'Thecc.08G020400' => 'tca', 'Thecc.08G182100' => 'tca', 'Thhalv10000873m.g' => 'esa', 'Thhalv10004185m.g' => 'esa', 'Thhalv10006981m.g' => 'esa', 'Thhalv10007204m.g' => 'esa', 'Thhalv10011374m.g' => 'esa', 'Thhalv10013482m.g' => 'esa', 'Thhalv10017801m.g' => 'esa', 'Thhalv10024983m.g' => 'esa', 'TPR.G12072' => 'tpr', 'TPR.G15769' => 'tpr', 'TPR.G16504' => 'tpr', 'TPR.G16506' => 'tpr', 'TPR.G24345' => 'tpr', 'TPR.G26666' => 'tpr', 'TPR.G27320' => 'tpr', 'TPR.G31819' => 'tpr', 'TPR.G38879' => 'tpr', 'TPR.G39015' => 'tpr', 'TPR.G8819' => 'tpr', 'TWI09G0924' => 'twi', 'TWI12G0811' => 'twi', 'TWI12G1294' => 'twi', 'TWI31G0150' => 'twi', 'TWI36G1262' => 'twi', 'TWI38G1287' => 'twi', 'TWI38G1633' => 'twi', 'TWI38G1982' => 'twi', 'TWI39G0116' => 'twi', 'TWI60G1011' => 'twi', 'TWI63G0171' => 'twi', 'TWI73G0839' => 'twi', 'TWI79G1511' => 'twi', 'unitig_0.g915' => 'ugi', 'unitig_0.g916' => 'ugi', 'unitig_21.g20219' => 'ugi', 'unitig_21.g20416' => 'ugi', 'unitig_578.g16132' => 'ugi', 'unitig_578.g16718' => 'ugi', 'unitig_62.g23481' => 'ugi', 'unitig_744.g24535' => 'ugi', 'unitig_749.g13525' => 'ugi', 'vmacro01248' => 'vma', 'vmacro02290' => 'vma', 'vmacro10946' => 'vma', 'vmacro11865' => 'vma', 'vmacro12493' => 'vma', 'vmacro17322' => 'vma', 'vmacro21599' => 'vma', 'vmacro23041' => 'vma', 'VMungo0251G0004' => 'vmu', 'VMungo0251G2639' => 'vmu', 'VMungo0251G2967' => 'vmu', 'VMungo0540G0864' => 'vmu', 'VMungo0540G1569' => 'vmu', 'VMungo0647G0317' => 'vmu', 'VMungo0720G1373' => 'vmu', 'VMungo0720G1508' => 'vmu', 'VMungo1080G0485' => 'vmu', 'VMungo1215G3177' => 'vmu', 'Zm00001eb112600' => 'zma', 'Zm00001eb120220' => 'zma', 'Zm00001eb153240' => 'zma', 'Zm00001eb168880' => 'zma', 'Zm00001eb213920' => 'zma', 'Zm00001eb228280' => 'zma', 'Zm00001eb254580' => 'zma', 'Zm00001eb272180' => 'zma', 'Zm00001eb293190' => 'zma', 'Zm00001eb322930' => 'zma', 'Zm00001eb353360' => 'zma', 'Zm00001eb353390' => 'zma', 'Zm00001eb353430' => 'zma', 'Zm00001eb353440' => 'zma', 'Zm00001eb353780' => 'zma' ), 'gf_id' => 'HOM05D000499', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000499' ), 'data_identifier' => 'HOM05D000499', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000499', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1066', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p29780' => 'bna', 'A02p33180' => 'bna', 'A03p16470' => 'bna', 'A03p66010' => 'bna', 'A04p25970' => 'bna', 'A06p01270' => 'bna', 'A06p46080' => 'bna', 'A07p11400' => 'bna', 'A08p01840' => 'bna', 'A08p08230' => 'bna', 'A08p25740' => 'bna', 'A09p32070' => 'bna', 'A09p37830' => 'bna', 'A09p42840' => 'bna', 'A09p42850' => 'bna', 'Aa31LG10G2060' => 'aar', 'Aa31LG2G7410' => 'aar', 'Aa31LG6G10200' => 'aar', 'Aa31LG6G16680' => 'aar', 'Aa31LG6G8470' => 'aar', 'Aa31LG9G12730' => 'aar', 'Aa31LG9G13680' => 'aar', 'Aa31LG9G14920' => 'aar', 'Aa31LG9G6650' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4977' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5467' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3254' => 'aag', 'Actinidia02578' => 'ach', 'Actinidia07693' => 'ach', 'Actinidia08413' => 'ach', 'Actinidia08414' => 'ach', 'Actinidia15289' => 'ach', 'Actinidia19871' => 'ach', 'Actinidia21475' => 'ach', 'Actinidia22576' => 'ach', 'Actinidia28327' => 'ach', 'Actinidia32491' => 'ach', 'Actinidia39463' => 'ach', 'Actinidia39571' => 'ach', 'Ah.01g013750' => 'amhyb', 'Ah.01g023210' => 'amhyb', 'Ah.04g164850' => 'amhyb', 'Ah.05g178060' => 'amhyb', 'Ah.07g204270' => 'amhyb', 'Ah.07g208480' => 'amhyb', 'Ah.09g237410' => 'amhyb', 'Ah.14g089460' => 'amhyb', 'AL1G41790' => 'aly', 'AL1G49050' => 'aly', 'AL1G53810' => 'aly', 'AL1G61400' => 'aly', 'AL4G18580' => 'aly', 'AL5G12510' => 'aly', 'AL5G12540' => 'aly', 'AL6G43230' => 'aly', 'AL7G10370' => 'aly', 'AL7G19250' => 'aly', 'AL8G12240' => 'aly', 'AL8G18540' => 'aly', 'Aqoxy1G02409' => 'aox', 'Aqoxy2G03993' => 'aox', 'Aqoxy3G03357' => 'aox', 'Aqoxy4G00785' => 'aox', 'Aqoxy5G02598' => 'aox', 'Aqoxy6G00132' => 'aox', 'Aqoxy7G01776' => 'aox', 'Aqoxy7G02316' => 'aox', 'Aqoxy7G03973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.12AFKW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B8730' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27IQR1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3F75VG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3RE0GA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41TCQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.527VTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FIR39' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5W8UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DA38EV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ63HS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H1I32C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HC27T5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4M8AP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7N3CZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9UVDZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LS1NQA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT1D4B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SKC4TM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCFV76' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF9Q1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQWD9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1ZM88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WE07RT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YCK7VH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJE6Q6' => 'arhy', 'AT1G28240' => 'ath', 'AT1G34550' => 'ath', 'AT1G53040' => 'ath', 'AT2G02910' => 'ath', 'AT4G09630' => 'ath', 'AT4G38500' => 'ath', 'AT5G42660' => 'ath', 'AT5G46220' => 'ath', 'ATR0152G026' => 'atr', 'ATR0564G343' => 'atr', 'ATR0706G151' => 'atr', 'ATR0733G207' => 'atr', 'ATR0751G234' => 'atr', 'ATR0807G048' => 'atr', 'ATR1091G084' => 'atr', 'Atru.chr10.1229' => 'acertr', 'Atru.chr10.1230' => 'acertr', 'Atru.chr10.1874' => 'acertr', 'Atru.chr11.1808' => 'acertr', 'Atru.chr13.1795' => 'acertr', 'Atru.chr13.570' => 'acertr', 'Atru.chr2.2608' => 'acertr', 'Atru.chr2.2609' => 'acertr', 'Atru.chr5.3428' => 'acertr', 'Atru.chr8.1171' => 'acertr', 'AUR62004651' => 'cqu', 'AUR62008675' => 'cqu', 'AUR62010014' => 'cqu', 'AUR62013004' => 'cqu', 'AUR62014825' => 'cqu', 'AUR62015015' => 'cqu', 'AUR62015151' => 'cqu', 'AUR62017020' => 'cqu', 'AUR62019422' => 'cqu', 'AUR62023570' => 'cqu', 'AUR62025571' => 'cqu', 'AUR62029098' => 'cqu', 'AUR62033863' => 'cqu', 'AUR62034296' => 'cqu', 'AUR62040075' => 'cqu', 'BcaB02g07334' => 'bca', 'BcaB02g10575' => 'bca', 'BcaB03g12119' => 'bca', 'BcaB03g12120' => 'bca', 'BcaB03g13945' => 'bca', 'BcaB04g17123' => 'bca', 'BcaB04g17867' => 'bca', 'BcaB04g19839' => 'bca', 'BcaB07g30317' => 'bca', 'BcaB07g32432' => 'bca', 'BcaB07g33362' => 'bca', 'BcaB08g36611' => 'bca', 'BcaC01g00028' => 'bca', 'BcaC01g01356' => 'bca', 'BcaC01g02034' => 'bca', 'BcaC01g06051' => 'bca', 'BcaC03g16839' => 'bca', 'BcaC03g17176' => 'bca', 'BcaC05g26829' => 'bca', 'BcaC06g31490' => 'bca', 'BcaC06g35344' => 'bca', 'BcaC06g36570' => 'bca', 'BcaC07g37537' => 'bca', 'BcaC08g43491' => 'bca', 'BcaC08g43773' => 'bca', 'BcaNung00234' => 'bca', 'BcaNung01982' => 'bca', 'BcaNung03707' => 'bca', 'BcaNung06454' => 'bca', 'BolC2t10762H' => 'bol', 'BolC2t11191H' => 'bol', 'BolC3t14322H' => 'bol', 'BolC3t19747H' => 'bol', 'BolC3t21425H' => 'bol', 'BolC4t27800H' => 'bol', 'BolC5t31423H' => 'bol', 'BolC6t35951H' => 'bol', 'BolC6t36282H' => 'bol', 'BolC7t40678H' => 'bol', 'BolC7t40679H' => 'bol', 'BolC7t42222H' => 'bol', 'BolC7t43492H' => 'bol', 'BolC7t46785H' => 'bol', 'BolC8t47853H' => 'bol', 'BolC9t56805H' => 'bol', 'BraA02t08000Z' => 'bra', 'BraA02t08341Z' => 'bra', 'BraA03t10936Z' => 'bra', 'BraA03t15657Z' => 'bra', 'BraA04t18100Z' => 'bra', 'BraA05t20523Z' => 'bra', 'BraA06t23353Z' => 'bra', 'BraA06t27473Z' => 'bra', 'BraA06t27769Z' => 'bra', 'BraA07t28928Z' => 'bra', 'BraA08t32236Z' => 'bra', 'BraA08t32841Z' => 'bra', 'BraA08t34524Z' => 'bra', 'BraA09t38742Z' => 'bra', 'BraA09t39295Z' => 'bra', 'C02p47180' => 'bna', 'C02p50990' => 'bna', 'C03p19360' => 'bna', 'C03p74950' => 'bna', 'C03p91000' => 'bna', 'C04p63260' => 'bna', 'C05p27050' => 'bna', 'C06p08750' => 'bna', 'C06p11490' => 'bna', 'C07p02820' => 'bna', 'C07p17180' => 'bna', 'C07p29440' => 'bna', 'C07p63730' => 'bna', 'C09p39260' => 'bna', 'CAN.G1164.34' => 'can', 'CAN.G1164.39' => 'can', 'CAN.G1530.3' => 'can', 'CAN.G162.61' => 'can', 'CAN.G176.6' => 'can', 'CAN.G289.49' => 'can', 'CAN.G370.21' => 'can', 'CAN.G370.22' => 'can', 'CAN.G371.117' => 'can', 'CAN.G58.37' => 'can', 'CAN.G588.98' => 'can', 'CANSAT21G2266' => 'cansat', 'CANSAT25G2799' => 'cansat', 'CANSAT35G0862' => 'cansat', 'CANSAT35G1704' => 'cansat', 'CANSAT35G1760' => 'cansat', 'CANSAT56G3971' => 'cansat', 'CANSAT56G4116' => 'cansat', 'CANSAT80G1259' => 'cansat', 'CARHR027730' => 'chi', 'CARHR033880' => 'chi', 'CARHR043270' => 'chi', 'CARHR145330' => 'chi', 'CARHR145340' => 'chi', 'CARHR175570' => 'chi', 'CARHR181570' => 'chi', 'CARHR258470' => 'chi', 'CARHR260490' => 'chi', 'CARHR294220' => 'chi', 'Carub.0001s2668' => 'cru', 'Carub.0001s3257' => 'cru', 'Carub.0001s4220' => 'cru', 'Carub.0005s0179' => 'cru', 'Carub.0006s2807' => 'cru', 'Carub.0007s0039' => 'cru', 'Carub.0008s0169' => 'cru', 'Carub.0008s0636' => 'cru', 'Ca_00338_v3' => 'car', 'Ca_00542_v3' => 'car', 'Ca_01844_v3' => 'car', 'Ca_10611_v3' => 'car', 'Ca_13326_v3' => 'car', 'Ca_17944_v3' => 'car', 'Ca_18546_v3' => 'car', 'Ca_24219_v3' => 'car', 'Ca_29972_v3' => 'car', 'CBR_g3681' => 'cbr', 'CBR_g40021' => 'cbr', 'Cc01_g08140' => 'ccan', 'Cc02_g13410' => 'ccan', 'Cc02_g37480' => 'ccan', 'Cc05_g12030' => 'ccan', 'Cc09_g03370' => 'ccan', 'Cc09_g10300' => 'ccan', 'Cc10_g03530' => 'ccan', 'Cc10_g11380' => 'ccan', 'CDE01G0176' => 'cde', 'CDE02G0675' => 'cde', 'CDE02G0942' => 'cde', 'CDE02G1153' => 'cde', 'CDE02G4177' => 'cde', 'CDE04G2117' => 'cde', 'CDE04G2736' => 'cde', 'CDE08G1161' => 'cde', 'CDE09G1238' => 'cde', 'Cfa000467' => 'cfa', 'Cfa000947' => 'cfa', 'Cfa004969' => 'cfa', 'Cfa005284' => 'cfa', 'Cfa008993' => 'cfa', 'Cfa018187' => 'cfa', 'Cfa018454' => 'cfa', 'Cfa020585' => 'cfa', 'Ciclev10000424m.g' => 'ccl', 'Ciclev10003605m.g' => 'ccl', 'Ciclev10007828m.g' => 'ccl', 'Ciclev10014620m.g' => 'ccl', 'Ciclev10015169m.g' => 'ccl', 'Ciclev10018291m.g' => 'ccl', 'Ciclev10028256m.g' => 'ccl', 'Ciclev10033822m.g' => 'ccl', 'CiPaw.05G060300' => 'cil', 'CiPaw.05G085000' => 'cil', 'CiPaw.06G083700' => 'cil', 'CiPaw.06G120300' => 'cil', 'CiPaw.09G060500' => 'cil', 'CiPaw.09G123800' => 'cil', 'CiPaw.11G169700' => 'cil', 'CiPaw.12G118300' => 'cil', 'CiPaw.15G071000' => 'cil', 'CiPaw.15G081900' => 'cil', 'ClCG01G024610' => 'cla', 'ClCG03G006070' => 'cla', 'ClCG05G019250' => 'cla', 'ClCG09G009500' => 'cla', 'ClCG11G008200' => 'cla', 'ClCG11G018080' => 'cla', 'COL.COLO4_17373' => 'col', 'COL.COLO4_22994' => 'col', 'COL.COLO4_26389' => 'col', 'COL.COLO4_27170' => 'col', 'COL.COLO4_31074' => 'col', 'COL.COLO4_31465' => 'col', 'COL.COLO4_36438' => 'col', 'COL.COLO4_36439' => 'col', 'Cpa.g.c38781' => 'cpa', 'Cpa.g.sc128.12' => 'cpa', 'Cpa.g.sc166.7' => 'cpa', 'Cpa.g.sc166.8' => 'cpa', 'Cpa.g.sc20.111' => 'cpa', 'Cpa.g.sc27.31' => 'cpa', 'Cpa.g.sc64.36' => 'cpa', 'Cpa.g.sc64.37' => 'cpa', 'Cpa.g.sc66.49' => 'cpa', 'Cpa.g.sc80.64' => 'cpa', 'CsaV3_1G012320' => 'csa', 'CsaV3_2G008480' => 'csa', 'CsaV3_2G033450' => 'csa', 'CsaV3_3G044830' => 'csa', 'CsaV3_4G033710' => 'csa', 'CsaV3_6G051730' => 'csa', 'CsaV3_7G025350' => 'csa', 'CSS0001067' => 'camsi', 'CSS0005996' => 'camsi', 'CSS0006590' => 'camsi', 'CSS0009673' => 'camsi', 'CSS0010201' => 'camsi', 'CSS0010549' => 'camsi', 'CSS0011364' => 'camsi', 'CSS0014473' => 'camsi', 'CSS0014961' => 'camsi', 'CSS0020191' => 'camsi', 'CSS0021165' => 'camsi', 'CSS0022306' => 'camsi', 'CSS0030591' => 'camsi', 'CSS0030696' => 'camsi', 'CSS0032653' => 'camsi', 'CSS0037487' => 'camsi', 'CSS0041102' => 'camsi', 'CSS0041261' => 'camsi', 'CSS0046246' => 'camsi', 'CSS0049256' => 'camsi', 'DCAR_004075' => 'dca', 'DCAR_011538' => 'dca', 'DCAR_019553' => 'dca', 'DCAR_020952' => 'dca', 'DCAR_021739' => 'dca', 'DCAR_027407' => 'dca', 'DCAR_027913' => 'dca', 'DCAR_028066' => 'dca', 'Dinv05899' => 'din', 'Dinv07563' => 'din', 'Dinv08010' => 'din', 'Dinv14125' => 'din', 'Dinv20172' => 'din', 'Dinv30743' => 'din', 'Dinv31229' => 'din', 'Dinv34162' => 'din', 'Dinv36028' => 'din', 'Dinv39368' => 'din', 'Dinv40565' => 'din', 'Dinv41706' => 'din', 'Duzib052G0089' => 'dzi', 'Duzib116G0641' => 'dzi', 'Duzib132G0069' => 'dzi', 'Duzib132G1219' => 'dzi', 'Duzib147G0278' => 'dzi', 'Duzib160G0480' => 'dzi', 'Duzib170G0661' => 'dzi', 'Duzib177G0591' => 'dzi', 'Duzib187G1353' => 'dzi', 'Duzib192G0858' => 'dzi', 'Duzib192G0883' => 'dzi', 'Duzib213G0506' => 'dzi', 'Duzib235G0289' => 'dzi', 'Duzib251G0422' => 'dzi', 'ECA232G3898' => 'eca', 'ECA233G5950' => 'eca', 'ECA234G1699' => 'eca', 'ECA234G2421' => 'eca', 'ECA236G0426' => 'eca', 'ECA236G4331' => 'eca', 'ECA248G2573' => 'eca', 'EL10Ac1g00077' => 'bvu', 'EL10Ac1g01746' => 'bvu', 'EL10Ac2g03464' => 'bvu', 'EL10Ac4g08176' => 'bvu', 'EL10Ac7g17521' => 'bvu', 'EL10Ac8g20386' => 'bvu', 'EL10Ac9g21343' => 'bvu', 'EL10Ac9g22688' => 'bvu', 'Eucgr.B03434' => 'egr', 'Eucgr.D00618' => 'egr', 'Eucgr.E02395' => 'egr', 'Eucgr.F01129' => 'egr', 'Eucgr.F02622' => 'egr', 'Eucgr.F04207' => 'egr', 'FAN01G0570' => 'fan', 'FAN03G3351' => 'fan', 'FAN06G3702' => 'fan', 'FAN07G2149' => 'fan', 'FAN10G3758' => 'fan', 'FAN11G1170' => 'fan', 'FAN11G2050' => 'fan', 'FAN11G2724' => 'fan', 'FAN12G1700' => 'fan', 'FAN12G2028' => 'fan', 'FAN15G1160' => 'fan', 'FAN15G3063' => 'fan', 'FAN16G2540' => 'fan', 'FAN16G3077' => 'fan', 'FAN16G3624' => 'fan', 'FAN17G0221' => 'fan', 'FAN20G2492' => 'fan', 'FAN20G2905' => 'fan', 'FAN21G0548' => 'fan', 'FAN21G1300' => 'fan', 'FAN22G0077' => 'fan', 'FAN22G1315' => 'fan', 'FAN24G1280' => 'fan', 'FAN24G1445' => 'fan', 'FAN24G3527' => 'fan', 'FAN25G0464' => 'fan', 'FAN25G2885' => 'fan', 'FAN25G3270' => 'fan', 'FAN27G1101' => 'fan', 'FAN27G2846' => 'fan', 'FAN27G3524' => 'fan', 'FvH4_2g11770' => 'fve', 'FvH4_2g15630' => 'fve', 'FvH4_3g05570' => 'fve', 'FvH4_3g09110' => 'fve', 'FvH4_3g19940' => 'fve', 'FvH4_4g04821' => 'fve', 'FvH4_4g31480' => 'fve', 'FvH4_7g01740' => 'fve', 'Glyma.05G130400' => 'gma', 'Glyma.05G156400' => 'gma', 'Glyma.07G197000' => 'gma', 'Glyma.08G085151' => 'gma', 'Glyma.08G114500' => 'gma', 'Glyma.08G300400' => 'gma', 'Glyma.10G215800' => 'gma', 'Glyma.12G224400' => 'gma', 'Glyma.13G179300' => 'gma', 'Glyma.13G218151' => 'gma', 'Glyma.13G238800' => 'gma', 'Glyma.13G276900' => 'gma', 'Glyma.14G078200' => 'gma', 'Glyma.15G074500' => 'gma', 'Glyma.15G094100' => 'gma', 'Glyma.17G247200' => 'gma', 'Glyma.18G120100' => 'gma', 'Glyma.20G176000' => 'gma', 'Gohir.A01G063600' => 'ghi', 'Gohir.A01G170301' => 'ghi', 'Gohir.A02G060500' => 'ghi', 'Gohir.A05G133850' => 'ghi', 'Gohir.A05G161400' => 'ghi', 'Gohir.A06G012900' => 'ghi', 'Gohir.A06G035901' => 'ghi', 'Gohir.A06G127100' => 'ghi', 'Gohir.A06G210500' => 'ghi', 'Gohir.A08G008650' => 'ghi', 'Gohir.A09G072700' => 'ghi', 'Gohir.A09G088301' => 'ghi', 'Gohir.A10G040600' => 'ghi', 'Gohir.A12G036300' => 'ghi', 'Gohir.A12G143350' => 'ghi', 'Gohir.A12G165500' => 'ghi', 'Gohir.A13G145700' => 'ghi', 'Gohir.D01G050000' => 'ghi', 'Gohir.D01G051366' => 'ghi', 'Gohir.D01G161350' => 'ghi', 'Gohir.D02G065900' => 'ghi', 'Gohir.D05G164200' => 'ghi', 'Gohir.D05G355500' => 'ghi', 'Gohir.D06G010400' => 'ghi', 'Gohir.D06G111250' => 'ghi', 'Gohir.D06G132000' => 'ghi', 'Gohir.D06G210500' => 'ghi', 'Gohir.D07G165675' => 'ghi', 'Gohir.D08G062240' => 'ghi', 'Gohir.D08G086101' => 'ghi', 'Gohir.D08G138060' => 'ghi', 'Gohir.D09G072300' => 'ghi', 'Gohir.D10G041400' => 'ghi', 'Gohir.D11G191020' => 'ghi', 'Gohir.D11G212066' => 'ghi', 'Gohir.D12G036300' => 'ghi', 'Gohir.D12G168600' => 'ghi', 'Gohir.D13G150600' => 'ghi', 'Gorai.001G057300' => 'gra', 'Gorai.002G069900' => 'gra', 'Gorai.002G200000' => 'gra', 'Gorai.003G067600' => 'gra', 'Gorai.005G074800' => 'gra', 'Gorai.006G087300' => 'gra', 'Gorai.008G037500' => 'gra', 'Gorai.008G181400' => 'gra', 'Gorai.009G169400' => 'gra', 'Gorai.009G387900' => 'gra', 'Gorai.010G013300' => 'gra', 'Gorai.010G153800' => 'gra', 'Gorai.010G255800' => 'gra', 'Gorai.011G043700' => 'gra', 'Gorai.011G198900' => 'gra', 'Gorai.013G168400' => 'gra', 'GSVIVG01005212001' => 'vvi', 'GSVIVG01006163001' => 'vvi', 'GSVIVG01009625001' => 'vvi', 'GSVIVG01014338001' => 'vvi', 'GSVIVG01020005001' => 'vvi', 'GSVIVG01021450001' => 'vvi', 'GSVIVG01023975001' => 'vvi', 'GSVIVG01034490001' => 'vvi', 'HanXRQChr04g0112071' => 'han', 'HanXRQChr05g0131151' => 'han', 'HanXRQChr09g0262371' => 'han', 'HanXRQChr09g0268401' => 'han', 'HanXRQChr10g0279241' => 'han', 'HanXRQChr10g0297961' => 'han', 'HanXRQChr11g0326231' => 'han', 'HanXRQChr11g0328471' => 'han', 'HanXRQChr16g0507941' => 'han', 'HanXRQChr17g0560211' => 'han', 'Haze_02108' => 'cav', 'Haze_02428' => 'cav', 'Haze_05593' => 'cav', 'Haze_06448' => 'cav', 'Haze_09427' => 'cav', 'Haze_12022' => 'cav', 'Haze_17612' => 'cav', 'Haze_17928' => 'cav', 'Hma1.2p1_0032F.1_g019250' => 'hma', 'Hma1.2p1_0163F.1_g072690' => 'hma', 'Hma1.2p1_0265F.1_g106710' => 'hma', 'Hma1.2p1_0286F.1_g113970' => 'hma', 'Hma1.2p1_0363F.1_g136640' => 'hma', 'Hma1.2p1_0584F.1_g183470' => 'hma', 'Hma1.2p1_0885F.1_g232570' => 'hma', 'HPP92_006022' => 'vpl', 'HPP92_007320' => 'vpl', 'HPP92_011521' => 'vpl', 'HPP92_019387' => 'vpl', 'HPP92_024038' => 'vpl', 'Hund05891' => 'sun', 'Hund06450' => 'sun', 'Hund12053' => 'sun', 'Hund16800' => 'sun', 'Hund21222' => 'sun', 'Hund22896' => 'sun', 'Hund23746' => 'sun', 'Hund27083' => 'sun', 'Lalb_Chr02g0141831' => 'lal', 'Lalb_Chr02g0141841' => 'lal', 'Lalb_Chr05g0220411' => 'lal', 'Lalb_Chr06g0162081' => 'lal', 'Lalb_Chr09g0327651' => 'lal', 'Lalb_Chr13g0295051' => 'lal', 'Lalb_Chr15g0086801' => 'lal', 'Lalb_Chr16g0383781' => 'lal', 'Lalb_Chr16g0383791' => 'lal', 'Lalb_Chr18g0055441' => 'lal', 'Lalb_Chr18g0059611' => 'lal', 'Lalb_Chr20g0109661' => 'lal', 'Lalb_Chr20g0109831' => 'lal', 'Lalb_Chr20g0121871' => 'lal', 'Lalb_Chr22g0355361' => 'lal', 'Lalb_Chr25g0286371' => 'lal', 'Lj1A1187G43' => 'lonja', 'Lj1A1205T50' => 'lonja', 'Lj1A800G33' => 'lonja', 'Lj1C1187T7' => 'lonja', 'Lj1C843T11' => 'lonja', 'Lj1g0010940' => 'lja', 'Lj2A288T69' => 'lonja', 'Lj3g0024276' => 'lja', 'Lj4A47T76' => 'lonja', 'Lj4g0005805' => 'lja', 'Lj4g0006097' => 'lja', 'Lj4g0008528' => 'lja', 'Lj4g0024907' => 'lja', 'Lj5g0012472' => 'lja', 'Lj5g0018648' => 'lja', 'Lj6C789G1' => 'lonja', 'Lj6g0004000' => 'lja', 'Lj7A292G67' => 'lonja', 'Lj7A292T64' => 'lonja', 'Lj9A400T58' => 'lonja', 'Lsat_1_v5_gn_1_126181' => 'lsa', 'Lsat_1_v5_gn_4_123041' => 'lsa', 'Lsat_1_v5_gn_4_133620' => 'lsa', 'Lsat_1_v5_gn_4_53221' => 'lsa', 'Lsat_1_v5_gn_4_71961' => 'lsa', 'Lsat_1_v5_gn_7_105241' => 'lsa', 'Lsat_1_v5_gn_7_21361' => 'lsa', 'Lsat_1_v5_gn_7_28860' => 'lsa', 'Lsat_1_v5_gn_7_31260' => 'lsa', 'Lsat_1_v5_gn_8_52801' => 'lsa', 'Manes.02G191400' => 'mes', 'Manes.03G110100' => 'mes', 'Manes.04G071100' => 'mes', 'Manes.05G100500' => 'mes', 'Manes.05G164700' => 'mes', 'Manes.15G087000' => 'mes', 'Manes.15G121500' => 'mes', 'Manes.16G028300' => 'mes', 'Manes.17G046100' => 'mes', 'Manes.17G069800' => 'mes', 'Manes.18G100500' => 'mes', 'Mapoly0002s0109' => 'mpo', 'Mapoly0024s0007' => 'mpo', 'Mapoly0089s0032' => 'mpo', 'MBI04_g42241_MAGBIO' => 'mbi', 'MBI05_g11988_MAGBIO' => 'mbi', 'MBI05_g35452_MAGBIO' => 'mbi', 'MBI07_g30179_MAGBIO' => 'mbi', 'MBI07_g35859_MAGBIO' => 'mbi', 'MBI07_g35860_MAGBIO' => 'mbi', 'MBI07_g37166_MAGBIO' => 'mbi', 'MBI08_g18172_MAGBIO' => 'mbi', 'MBI09_g08441_MAGBIO' => 'mbi', 'MBI13_g01676_MAGBIO' => 'mbi', 'MBI14_g42955_MAGBIO' => 'mbi', 'MBI16_g13161_MAGBIO' => 'mbi', 'MBI17_g27204_MAGBIO' => 'mbi', 'MBI19_g21595_MAGBIO' => 'mbi', 'MD00G1148400' => 'mdo', 'MD02G1301200' => 'mdo', 'MD03G1227800' => 'mdo', 'MD05G1041100' => 'mdo', 'MD05G1124800' => 'mdo', 'MD05G1284000' => 'mdo', 'MD05G1338800' => 'mdo', 'MD05G1338900' => 'mdo', 'MD07G1022800' => 'mdo', 'MD10G1047500' => 'mdo', 'MD10G1127500' => 'mdo', 'MD10G1262300' => 'mdo', 'MD10G1293800' => 'mdo', 'MD16G1074300' => 'mdo', 'Medtr1g021670' => 'mtr', 'Medtr1g096320' => 'mtr', 'Medtr2g013690' => 'mtr', 'Medtr2g019450' => 'mtr', 'Medtr2g085170' => 'mtr', 'Medtr4g088785' => 'mtr', 'Medtr8g055930' => 'mtr', 'Medtr8g085850' => 'mtr', 'MELO3C002605.2' => 'cme', 'MELO3C003891.2' => 'cme', 'MELO3C004012.2' => 'cme', 'MELO3C007134.2' => 'cme', 'MELO3C008118.2' => 'cme', 'MELO3C016700.2' => 'cme', 'MELO3C024127.2' => 'cme', 'MELO3C033361.2' => 'cme', 'MELO3C033362.2' => 'cme', 'Migut.C00430' => 'egut', 'Migut.C01246' => 'egut', 'Migut.E00101' => 'egut', 'Migut.H01486' => 'egut', 'Migut.H01939' => 'egut', 'Migut.K00360' => 'egut', 'Migut.M00910' => 'egut', 'Migut.M01139' => 'egut', 'Migut.N02677' => 'egut', 'MSTRG.13252' => 'ama', 'MSTRG.14701' => 'ama', 'MSTRG.1521' => 'ama', 'MSTRG.15884' => 'ama', 'MSTRG.16242' => 'ama', 'MSTRG.22285' => 'ama', 'MSTRG.22444' => 'ama', 'MSTRG.2349' => 'ama', 'MSTRG.26308' => 'ama', 'MSTRG.28296' => 'ama', 'MSTRG.9895' => 'ama', 'Nitab4.5_0000110g0060' => 'nta', 'Nitab4.5_0000420g0130' => 'nta', 'Nitab4.5_0000422g0030' => 'nta', 'Nitab4.5_0000560g0180' => 'nta', 'Nitab4.5_0000703g0100' => 'nta', 'Nitab4.5_0000786g0200' => 'nta', 'Nitab4.5_0001336g0020' => 'nta', 'Nitab4.5_0001796g0030' => 'nta', 'Nitab4.5_0003348g0060' => 'nta', 'Nitab4.5_0003698g0040' => 'nta', 'Nitab4.5_0003942g0090' => 'nta', 'Nitab4.5_0004775g0070' => 'nta', 'Nitab4.5_0004864g0030' => 'nta', 'Nitab4.5_0005615g0020' => 'nta', 'Nitab4.5_0009288g0030' => 'nta', 'Nitab4.5_0009341g0010' => 'nta', 'Nitab4.5_0009535g0010' => 'nta', 'Nn1g03995' => 'nnu', 'Nn1g04100' => 'nnu', 'Nn1g06530' => 'nnu', 'Nn3g16404' => 'nnu', 'Nn3g17212' => 'nnu', 'Nn3g20776' => 'nnu', 'Nn3g21923' => 'nnu', 'Nn5g27737' => 'nnu', 'Nn5g29461' => 'nnu', 'Nn7g38355' => 'nnu', 'Nn8g39873' => 'nnu', 'Oeu000548.2' => 'oeu', 'Oeu004672.1' => 'oeu', 'Oeu015605.2' => 'oeu', 'Oeu016092.1' => 'oeu', 'Oeu017879.3' => 'oeu', 'Oeu024910.1' => 'oeu', 'Oeu028965.1' => 'oeu', 'Oeu031269.1' => 'oeu', 'Oeu031270.1' => 'oeu', 'Oeu032535.1' => 'oeu', 'Oeu034151.1' => 'oeu', 'Oeu034152.1' => 'oeu', 'Oeu034588.2' => 'oeu', 'Oeu050846.1' => 'oeu', 'Oeu050849.2' => 'oeu', 'Oeu051063.2' => 'oeu', 'Oeu052368.1' => 'oeu', 'Oeu052370.1' => 'oeu', 'Os01g0210400' => 'osa', 'Os01g0304300' => 'osa', 'Os01g0749100' => 'osa', 'Os02g0745800' => 'osa', 'Os03g0769050' => 'osa', 'Os05g0531500' => 'osa', 'Os06g0724300' => 'osa', 'Os11g0198100' => 'osa', 'Peaxi162Scf00069g01425' => 'pax', 'Peaxi162Scf00280g00811' => 'pax', 'Peaxi162Scf00310g00615' => 'pax', 'Peaxi162Scf00362g00542' => 'pax', 'Peaxi162Scf00461g00310' => 'pax', 'Peaxi162Scf00530g00118' => 'pax', 'Peaxi162Scf00541g00057' => 'pax', 'Peaxi162Scf00661g00017' => 'pax', 'Peaxi162Scf00926g00027' => 'pax', 'Peaxi162Scf01064g00263' => 'pax', 'Peaxi162Scf01211g00135' => 'pax', 'PGR004G2336' => 'pgr', 'PGR042G0327' => 'pgr', 'PGR042G1957' => 'pgr', 'PGR042G2003' => 'pgr', 'PGR042G3929' => 'pgr', 'PGR083G1137' => 'pgr', 'PGR083G1364' => 'pgr', 'PGSC0003DMG400003381' => 'stu', 'PGSC0003DMG400003417' => 'stu', 'PGSC0003DMG400008981' => 'stu', 'PGSC0003DMG400012417' => 'stu', 'PGSC0003DMG400012823' => 'stu', 'PGSC0003DMG400016885' => 'stu', 'PGSC0003DMG400022812' => 'stu', 'PGSC0003DMG400029726' => 'stu', 'PGSC0003DMG401009243' => 'stu', 'PGSC0003DMG401031505' => 'stu', 'PGSC0003DMG402031505' => 'stu', 'Phvul.001G017600' => 'pvu', 'Phvul.002G193500' => 'pvu', 'Phvul.002G228900' => 'pvu', 'Phvul.002G236800' => 'pvu', 'Phvul.003G049500' => 'pvu', 'Phvul.005G072000' => 'pvu', 'Phvul.006G164800' => 'pvu', 'Phvul.006G185100' => 'pvu', 'Phvul.007G090000' => 'pvu', 'Potri.001G399800' => 'ptr', 'Potri.002G149900' => 'ptr', 'Potri.004G044100' => 'ptr', 'Potri.004G177600' => 'ptr', 'Potri.009G138000' => 'ptr', 'Potri.010G094000' => 'ptr', 'Potri.011G053000' => 'ptr', 'Potri.011G119300' => 'ptr', 'Potri.013G113700' => 'ptr', 'Potri.018G107800' => 'ptr', 'Potri.019G084100' => 'ptr', 'Pp3c14_23720' => 'ppa', 'Pp3c16_6340' => 'ppa', 'Pp3c23_13420' => 'ppa', 'Pp3c24_2740' => 'ppa', 'Pp3c25_860' => 'ppa', 'Pp3c8_21750' => 'ppa', 'Prupe.1G273000' => 'ppe', 'Prupe.1G273700' => 'ppe', 'Prupe.1G274100' => 'ppe', 'Prupe.2G023300' => 'ppe', 'Prupe.4G048000' => 'ppe', 'Prupe.4G080400' => 'ppe', 'Prupe.4G181200' => 'ppe', 'Prupe.8G056900' => 'ppe', 'Prupe.8G168700' => 'ppe', 'Psat1g189080' => 'psa', 'Psat1g204760' => 'psa', 'Psat4g175560' => 'psa', 'Psat4g177720' => 'psa', 'Psat5g244240' => 'psa', 'Psat6g010720' => 'psa', 'Psat6g187200' => 'psa', 'Psat7g072040' => 'psa', 'PSO017G3501' => 'pso', 'PSO063G2148' => 'pso', 'PSO063G5608' => 'pso', 'PSO210G6392' => 'pso', 'PSO541G2319' => 'pso', 'PSO541G2836' => 'pso', 'PSO541G4012' => 'pso', 'PSO541G6253' => 'pso', 'PSO675G0580' => 'pso', 'PSO675G0856' => 'pso', 'PSO675G5635' => 'pso', 'PSO675G9157' => 'pso', 'PSO832G1660' => 'pso', 'PSO832G1969' => 'pso', 'QL02p007186' => 'qlo', 'QL02p033904' => 'qlo', 'QL03p064391' => 'qlo', 'QL05p040593' => 'qlo', 'QL05p058242' => 'qlo', 'QL08p021825' => 'qlo', 'QL11p004981' => 'qlo', 'RcHm_v2.0_Chr1g0318301' => 'rch', 'RcHm_v2.0_Chr4g0418501' => 'rch', 'RcHm_v2.0_Chr4g0439971' => 'rch', 'RcHm_v2.0_Chr5g0008541' => 'rch', 'RcHm_v2.0_Chr5g0014101' => 'rch', 'RcHm_v2.0_Chr5g0014131' => 'rch', 'RcHm_v2.0_Chr5g0033621' => 'rch', 'RcHm_v2.0_Chr6g0272041' => 'rch', 'RcHm_v2.0_Chr6g0278831' => 'rch', 'Rhsim02G0130400' => 'rsi', 'Rhsim02G0171100' => 'rsi', 'Rhsim05G0053000' => 'rsi', 'Rhsim05G0053100' => 'rsi', 'Rhsim06G0096500' => 'rsi', 'Rhsim06G0096600' => 'rsi', 'Rhsim06G0199100' => 'rsi', 'Rhsim12G0062300' => 'rsi', 'Rhsim12G0062800' => 'rsi', 'Sabra02G0118600' => 'sbr', 'Sabra04G0027300' => 'sbr', 'Sabra04G0119500' => 'sbr', 'Sabra08G0112500' => 'sbr', 'Sabra11G0036800' => 'sbr', 'Sabra11G0103800' => 'sbr', 'Sabra13G0096300' => 'sbr', 'Sabra16G0262300' => 'sbr', 'Sabra18G0091700' => 'sbr', 'Sabra19G0095400' => 'sbr', 'SalBow6G3080' => 'sbo', 'SalBow7G1157' => 'sbo', 'SalBow7G2123' => 'sbo', 'SalBow7G2285' => 'sbo', 'SalBow7G3537' => 'sbo', 'SalBow8G2947' => 'sbo', 'SalBow8G4463' => 'sbo', 'SalBow8G5466' => 'sbo', 'Sc01g0001750' => 'sci', 'Sc02g0006640' => 'sci', 'Sc02g0006670' => 'sci', 'Sc04g0008220' => 'sci', 'Sc05g0006190' => 'sci', 'Sc08g0002760' => 'sci', 'Sc17g0006170' => 'sci', 'Sc22g0002050' => 'sci', 'Sc23g0001190' => 'sci', 'Sc24g0000980' => 'sci', 'Sed0006245' => 'sed', 'Sed0007543' => 'sed', 'Sed0009411' => 'sed', 'Sed0010765' => 'sed', 'Sed0012944' => 'sed', 'Sed0014682' => 'sed', 'Sed0016174' => 'sed', 'Sed0016796' => 'sed', 'Sed0020317' => 'sed', 'Sed0021467' => 'sed', 'SEGI_01316' => 'sgi', 'SEGI_03374' => 'sgi', 'SEGI_16265' => 'sgi', 'SEGI_18569' => 'sgi', 'SEGI_20351' => 'sgi', 'SEGI_26395' => 'sgi', 'SEGI_29469' => 'sgi', 'SEGI_34771' => 'sgi', 'SEGI_36769' => 'sgi', 'SEGI_37139' => 'sgi', 'SGA_v2.0_scaffold100G29687' => 'sas', 'SGA_v2.0_scaffold118G32472' => 'sas', 'SGA_v2.0_scaffold14G07051' => 'sas', 'SGA_v2.0_scaffold183G39845' => 'sas', 'SGA_v2.0_scaffold1G00174' => 'sas', 'SGA_v2.0_scaffold22G09714' => 'sas', 'SGA_v2.0_scaffold333G48992' => 'sas', 'SGA_v2.0_scaffold46G17491' => 'sas', 'SGA_v2.0_scaffold49G18294' => 'sas', 'SGA_v2.0_scaffold63G21658' => 'sas', 'SHI01741' => 'shi', 'SHI05771' => 'shi', 'SHI18077' => 'shi', 'SHI20525' => 'shi', 'SHI20527' => 'shi', 'SHI20528' => 'shi', 'SMO172G0185' => 'smo', 'SMO198G0020' => 'smo', 'SMO351G0006' => 'smo', 'SMO356G0118' => 'smo', 'SMO358G0296' => 'smo', 'SMO367G0079' => 'smo', 'SMO367G1277' => 'smo', 'Solyc01g014220.3' => 'sly', 'Solyc01g111770.2' => 'sly', 'Solyc02g078180.3' => 'sly', 'Solyc03g006430.3' => 'sly', 'Solyc03g006456.1' => 'sly', 'Solyc03g079860.2' => 'sly', 'Solyc04g079770.3' => 'sly', 'Solyc05g007430.4' => 'sly', 'Solyc07g063150.3' => 'sly', 'Solyc08g016620.3' => 'sly', 'Solyc09g057590.3' => 'sly', 'Solyc09g057600.1' => 'sly', 'Solyc10g009050.3' => 'sly', 'Solyc11g017420.2' => 'sly', 'Sopen01g053810' => 'spe', 'Sopen02g023040' => 'spe', 'Sopen03g002440' => 'spe', 'Sopen04g033350' => 'spe', 'Sopen05g003310' => 'spe', 'Sopen07g004050' => 'spe', 'Sopen07g031340' => 'spe', 'Sopen08g006990' => 'spe', 'Sopen10g004830' => 'spe', 'Sopen11g009370' => 'spe', 'Sp1g24450' => 'spa', 'Sp1g29670' => 'spa', 'Sp1g39600' => 'spa', 'Sp2g11080' => 'spa', 'Sp2g13970' => 'spa', 'Sp4g16130' => 'spa', 'Sp6g13080' => 'spa', 'Sp7g37270' => 'spa', 'TAR371G0065' => 'tar', 'TAR376G0340' => 'tar', 'TAR376G0435' => 'tar', 'TAR381G0002' => 'tar', 'TAR381G1236' => 'tar', 'TAR624G0055' => 'tar', 'TAR624G0324' => 'tar', 'TAR624G0696' => 'tar', 'TAR624G0906' => 'tar', 'TAR625G0107' => 'tar', 'TAR626G0015' => 'tar', 'TAR626G1356' => 'tar', 'TAR627G0888' => 'tar', 'TAR628G0399' => 'tar', 'TAR628G1327' => 'tar', 'TAR629G2831' => 'tar', 'TAR629G2874' => 'tar', 'TAR633G1432' => 'tar', 'TAR633G2771' => 'tar', 'THA.LOC104803394' => 'tha', 'THA.LOC104805153' => 'tha', 'THA.LOC104806784' => 'tha', 'THA.LOC104810473' => 'tha', 'THA.LOC104813100' => 'tha', 'THA.LOC104814215' => 'tha', 'THA.LOC104815554' => 'tha', 'THA.LOC104820544' => 'tha', 'THA.LOC104824754' => 'tha', 'THA.LOC104827717' => 'tha', 'Thecc.02G031400' => 'tca', 'Thecc.02G055900' => 'tca', 'Thecc.02G350800' => 'tca', 'Thecc.06G150900' => 'tca', 'Thecc.06G186600' => 'tca', 'Thecc.07G089600' => 'tca', 'Thecc.08G020400' => 'tca', 'Thecc.08G182100' => 'tca', 'Thhalv10000873m.g' => 'esa', 'Thhalv10004185m.g' => 'esa', 'Thhalv10006981m.g' => 'esa', 'Thhalv10007204m.g' => 'esa', 'Thhalv10011374m.g' => 'esa', 'Thhalv10013482m.g' => 'esa', 'Thhalv10017801m.g' => 'esa', 'Thhalv10024983m.g' => 'esa', 'TPR.G12072' => 'tpr', 'TPR.G15769' => 'tpr', 'TPR.G16504' => 'tpr', 'TPR.G16506' => 'tpr', 'TPR.G24345' => 'tpr', 'TPR.G26666' => 'tpr', 'TPR.G27320' => 'tpr', 'TPR.G31819' => 'tpr', 'TPR.G38879' => 'tpr', 'TPR.G39015' => 'tpr', 'TPR.G8819' => 'tpr', 'TWI09G0924' => 'twi', 'TWI12G0811' => 'twi', 'TWI12G1294' => 'twi', 'TWI31G0150' => 'twi', 'TWI36G1262' => 'twi', 'TWI38G1287' => 'twi', 'TWI38G1633' => 'twi', 'TWI38G1982' => 'twi', 'TWI39G0116' => 'twi', 'TWI60G1011' => 'twi', 'TWI63G0171' => 'twi', 'TWI73G0839' => 'twi', 'TWI79G1511' => 'twi', 'unitig_0.g915' => 'ugi', 'unitig_0.g916' => 'ugi', 'unitig_21.g20219' => 'ugi', 'unitig_21.g20416' => 'ugi', 'unitig_578.g16132' => 'ugi', 'unitig_578.g16718' => 'ugi', 'unitig_62.g23481' => 'ugi', 'unitig_744.g24535' => 'ugi', 'unitig_749.g13525' => 'ugi', 'vmacro01248' => 'vma', 'vmacro02290' => 'vma', 'vmacro10946' => 'vma', 'vmacro11865' => 'vma', 'vmacro12493' => 'vma', 'vmacro17322' => 'vma', 'vmacro21599' => 'vma', 'vmacro23041' => 'vma', 'VMungo0251G0004' => 'vmu', 'VMungo0251G2639' => 'vmu', 'VMungo0251G2967' => 'vmu', 'VMungo0540G0864' => 'vmu', 'VMungo0540G1569' => 'vmu', 'VMungo0647G0317' => 'vmu', 'VMungo0720G1373' => 'vmu', 'VMungo0720G1508' => 'vmu', 'VMungo1080G0485' => 'vmu', 'VMungo1215G3177' => 'vmu', 'Zm00001eb112600' => 'zma', 'Zm00001eb120220' => 'zma', 'Zm00001eb153240' => 'zma', 'Zm00001eb168880' => 'zma', 'Zm00001eb213920' => 'zma', 'Zm00001eb228280' => 'zma', 'Zm00001eb254580' => 'zma', 'Zm00001eb272180' => 'zma', 'Zm00001eb293190' => 'zma', 'Zm00001eb322930' => 'zma', 'Zm00001eb353360' => 'zma', 'Zm00001eb353390' => 'zma', 'Zm00001eb353430' => 'zma', 'Zm00001eb353440' => 'zma', 'Zm00001eb353780' => 'zma' ) $gf_id = 'HOM05D000499' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000499' ) $data_identifier = 'HOM05D000499' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 29, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 12, 'amhyb' => (int) 8, 'aly' => (int) 12, 'aox' => (int) 9, 'arhy' => (int) 26, 'ath' => (int) 8, 'atr' => (int) 7, 'acertr' => (int) 10, 'cqu' => (int) 15, 'bca' => (int) 29, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 11, 'cansat' => (int) 8, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 9, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 8, 'cpa' => (int) 10, 'csa' => (int) 7, 'camsi' => (int) 20, 'dca' => (int) 8, 'din' => (int) 12, 'dzi' => (int) 14, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 6, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 38, 'gra' => (int) 16, 'vvi' => (int) 8, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 5, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 11, 'lja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 11, 'mpo' => (int) 3, 'mbi' => (int) 14, 'mdo' => (int) 14, 'mtr' => (int) 8, 'cme' => (int) 9, 'egut' => (int) 9, 'ama' => (int) 11, 'nta' => (int) 17, 'nnu' => (int) 11, 'oeu' => (int) 18, 'osa' => (int) 8, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 6, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 9, 'rsi' => (int) 9, 'sbr' => (int) 10, 'sbo' => (int) 8, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 10, 'sas' => (int) 10, 'shi' => (int) 6, 'smo' => (int) 7, 'sly' => (int) 14, 'spe' => (int) 10, 'spa' => (int) 8, 'tar' => (int) 19, 'tha' => (int) 10, 'tca' => (int) 8, 'esa' => (int) 8, 'tpr' => (int) 11, 'twi' => (int) 13, 'ugi' => (int) 9, 'vma' => (int) 8, 'vmu' => (int) 10, 'zma' => (int) 15 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb353780' $species_info = array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ) $local_species = 'cru' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000499', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1066', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p29780' => 'bna', 'A02p33180' => 'bna', 'A03p16470' => 'bna', 'A03p66010' => 'bna', 'A04p25970' => 'bna', 'A06p01270' => 'bna', 'A06p46080' => 'bna', 'A07p11400' => 'bna', 'A08p01840' => 'bna', 'A08p08230' => 'bna', 'A08p25740' => 'bna', 'A09p32070' => 'bna', 'A09p37830' => 'bna', 'A09p42840' => 'bna', 'A09p42850' => 'bna', 'Aa31LG10G2060' => 'aar', 'Aa31LG2G7410' => 'aar', 'Aa31LG6G10200' => 'aar', 'Aa31LG6G16680' => 'aar', 'Aa31LG6G8470' => 'aar', 'Aa31LG9G12730' => 'aar', 'Aa31LG9G13680' => 'aar', 'Aa31LG9G14920' => 'aar', 'Aa31LG9G6650' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4977' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5467' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3254' => 'aag', 'Actinidia02578' => 'ach', 'Actinidia07693' => 'ach', 'Actinidia08413' => 'ach', 'Actinidia08414' => 'ach', 'Actinidia15289' => 'ach', 'Actinidia19871' => 'ach', 'Actinidia21475' => 'ach', 'Actinidia22576' => 'ach', 'Actinidia28327' => 'ach', 'Actinidia32491' => 'ach', 'Actinidia39463' => 'ach', 'Actinidia39571' => 'ach', 'Ah.01g013750' => 'amhyb', 'Ah.01g023210' => 'amhyb', 'Ah.04g164850' => 'amhyb', 'Ah.05g178060' => 'amhyb', 'Ah.07g204270' => 'amhyb', 'Ah.07g208480' => 'amhyb', 'Ah.09g237410' => 'amhyb', 'Ah.14g089460' => 'amhyb', 'AL1G41790' => 'aly', 'AL1G49050' => 'aly', 'AL1G53810' => 'aly', 'AL1G61400' => 'aly', 'AL4G18580' => 'aly', 'AL5G12510' => 'aly', 'AL5G12540' => 'aly', 'AL6G43230' => 'aly', 'AL7G10370' => 'aly', 'AL7G19250' => 'aly', 'AL8G12240' => 'aly', 'AL8G18540' => 'aly', 'Aqoxy1G02409' => 'aox', 'Aqoxy2G03993' => 'aox', 'Aqoxy3G03357' => 'aox', 'Aqoxy4G00785' => 'aox', 'Aqoxy5G02598' => 'aox', 'Aqoxy6G00132' => 'aox', 'Aqoxy7G01776' => 'aox', 'Aqoxy7G02316' => 'aox', 'Aqoxy7G03973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.12AFKW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B8730' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27IQR1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3F75VG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3RE0GA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41TCQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.527VTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FIR39' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5W8UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DA38EV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ63HS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H1I32C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HC27T5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4M8AP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7N3CZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9UVDZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LS1NQA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT1D4B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SKC4TM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCFV76' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF9Q1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQWD9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1ZM88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WE07RT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YCK7VH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJE6Q6' => 'arhy', 'AT1G28240' => 'ath', 'AT1G34550' => 'ath', 'AT1G53040' => 'ath', 'AT2G02910' => 'ath', 'AT4G09630' => 'ath', 'AT4G38500' => 'ath', 'AT5G42660' => 'ath', 'AT5G46220' => 'ath', 'ATR0152G026' => 'atr', 'ATR0564G343' => 'atr', 'ATR0706G151' => 'atr', 'ATR0733G207' => 'atr', 'ATR0751G234' => 'atr', 'ATR0807G048' => 'atr', 'ATR1091G084' => 'atr', 'Atru.chr10.1229' => 'acertr', 'Atru.chr10.1230' => 'acertr', 'Atru.chr10.1874' => 'acertr', 'Atru.chr11.1808' => 'acertr', 'Atru.chr13.1795' => 'acertr', 'Atru.chr13.570' => 'acertr', 'Atru.chr2.2608' => 'acertr', 'Atru.chr2.2609' => 'acertr', 'Atru.chr5.3428' => 'acertr', 'Atru.chr8.1171' => 'acertr', 'AUR62004651' => 'cqu', 'AUR62008675' => 'cqu', 'AUR62010014' => 'cqu', 'AUR62013004' => 'cqu', 'AUR62014825' => 'cqu', 'AUR62015015' => 'cqu', 'AUR62015151' => 'cqu', 'AUR62017020' => 'cqu', 'AUR62019422' => 'cqu', 'AUR62023570' => 'cqu', 'AUR62025571' => 'cqu', 'AUR62029098' => 'cqu', 'AUR62033863' => 'cqu', 'AUR62034296' => 'cqu', 'AUR62040075' => 'cqu', 'BcaB02g07334' => 'bca', 'BcaB02g10575' => 'bca', 'BcaB03g12119' => 'bca', 'BcaB03g12120' => 'bca', 'BcaB03g13945' => 'bca', 'BcaB04g17123' => 'bca', 'BcaB04g17867' => 'bca', 'BcaB04g19839' => 'bca', 'BcaB07g30317' => 'bca', 'BcaB07g32432' => 'bca', 'BcaB07g33362' => 'bca', 'BcaB08g36611' => 'bca', 'BcaC01g00028' => 'bca', 'BcaC01g01356' => 'bca', 'BcaC01g02034' => 'bca', 'BcaC01g06051' => 'bca', 'BcaC03g16839' => 'bca', 'BcaC03g17176' => 'bca', 'BcaC05g26829' => 'bca', 'BcaC06g31490' => 'bca', 'BcaC06g35344' => 'bca', 'BcaC06g36570' => 'bca', 'BcaC07g37537' => 'bca', 'BcaC08g43491' => 'bca', 'BcaC08g43773' => 'bca', 'BcaNung00234' => 'bca', 'BcaNung01982' => 'bca', 'BcaNung03707' => 'bca', 'BcaNung06454' => 'bca', 'BolC2t10762H' => 'bol', 'BolC2t11191H' => 'bol', 'BolC3t14322H' => 'bol', 'BolC3t19747H' => 'bol', 'BolC3t21425H' => 'bol', 'BolC4t27800H' => 'bol', 'BolC5t31423H' => 'bol', 'BolC6t35951H' => 'bol', 'BolC6t36282H' => 'bol', 'BolC7t40678H' => 'bol', 'BolC7t40679H' => 'bol', 'BolC7t42222H' => 'bol', 'BolC7t43492H' => 'bol', 'BolC7t46785H' => 'bol', 'BolC8t47853H' => 'bol', 'BolC9t56805H' => 'bol', 'BraA02t08000Z' => 'bra', 'BraA02t08341Z' => 'bra', 'BraA03t10936Z' => 'bra', 'BraA03t15657Z' => 'bra', 'BraA04t18100Z' => 'bra', 'BraA05t20523Z' => 'bra', 'BraA06t23353Z' => 'bra', 'BraA06t27473Z' => 'bra', 'BraA06t27769Z' => 'bra', 'BraA07t28928Z' => 'bra', 'BraA08t32236Z' => 'bra', 'BraA08t32841Z' => 'bra', 'BraA08t34524Z' => 'bra', 'BraA09t38742Z' => 'bra', 'BraA09t39295Z' => 'bra', 'C02p47180' => 'bna', 'C02p50990' => 'bna', 'C03p19360' => 'bna', 'C03p74950' => 'bna', 'C03p91000' => 'bna', 'C04p63260' => 'bna', 'C05p27050' => 'bna', 'C06p08750' => 'bna', 'C06p11490' => 'bna', 'C07p02820' => 'bna', 'C07p17180' => 'bna', 'C07p29440' => 'bna', 'C07p63730' => 'bna', 'C09p39260' => 'bna', 'CAN.G1164.34' => 'can', 'CAN.G1164.39' => 'can', 'CAN.G1530.3' => 'can', 'CAN.G162.61' => 'can', 'CAN.G176.6' => 'can', 'CAN.G289.49' => 'can', 'CAN.G370.21' => 'can', 'CAN.G370.22' => 'can', 'CAN.G371.117' => 'can', 'CAN.G58.37' => 'can', 'CAN.G588.98' => 'can', 'CANSAT21G2266' => 'cansat', 'CANSAT25G2799' => 'cansat', 'CANSAT35G0862' => 'cansat', 'CANSAT35G1704' => 'cansat', 'CANSAT35G1760' => 'cansat', 'CANSAT56G3971' => 'cansat', 'CANSAT56G4116' => 'cansat', 'CANSAT80G1259' => 'cansat', 'CARHR027730' => 'chi', 'CARHR033880' => 'chi', 'CARHR043270' => 'chi', 'CARHR145330' => 'chi', 'CARHR145340' => 'chi', 'CARHR175570' => 'chi', 'CARHR181570' => 'chi', 'CARHR258470' => 'chi', 'CARHR260490' => 'chi', 'CARHR294220' => 'chi', 'Carub.0001s2668' => 'cru', 'Carub.0001s3257' => 'cru', 'Carub.0001s4220' => 'cru', 'Carub.0005s0179' => 'cru', 'Carub.0006s2807' => 'cru', 'Carub.0007s0039' => 'cru', 'Carub.0008s0169' => 'cru', 'Carub.0008s0636' => 'cru', 'Ca_00338_v3' => 'car', 'Ca_00542_v3' => 'car', 'Ca_01844_v3' => 'car', 'Ca_10611_v3' => 'car', 'Ca_13326_v3' => 'car', 'Ca_17944_v3' => 'car', 'Ca_18546_v3' => 'car', 'Ca_24219_v3' => 'car', 'Ca_29972_v3' => 'car', 'CBR_g3681' => 'cbr', 'CBR_g40021' => 'cbr', 'Cc01_g08140' => 'ccan', 'Cc02_g13410' => 'ccan', 'Cc02_g37480' => 'ccan', 'Cc05_g12030' => 'ccan', 'Cc09_g03370' => 'ccan', 'Cc09_g10300' => 'ccan', 'Cc10_g03530' => 'ccan', 'Cc10_g11380' => 'ccan', 'CDE01G0176' => 'cde', 'CDE02G0675' => 'cde', 'CDE02G0942' => 'cde', 'CDE02G1153' => 'cde', 'CDE02G4177' => 'cde', 'CDE04G2117' => 'cde', 'CDE04G2736' => 'cde', 'CDE08G1161' => 'cde', 'CDE09G1238' => 'cde', 'Cfa000467' => 'cfa', 'Cfa000947' => 'cfa', 'Cfa004969' => 'cfa', 'Cfa005284' => 'cfa', 'Cfa008993' => 'cfa', 'Cfa018187' => 'cfa', 'Cfa018454' => 'cfa', 'Cfa020585' => 'cfa', 'Ciclev10000424m.g' => 'ccl', 'Ciclev10003605m.g' => 'ccl', 'Ciclev10007828m.g' => 'ccl', 'Ciclev10014620m.g' => 'ccl', 'Ciclev10015169m.g' => 'ccl', 'Ciclev10018291m.g' => 'ccl', 'Ciclev10028256m.g' => 'ccl', 'Ciclev10033822m.g' => 'ccl', 'CiPaw.05G060300' => 'cil', 'CiPaw.05G085000' => 'cil', 'CiPaw.06G083700' => 'cil', 'CiPaw.06G120300' => 'cil', 'CiPaw.09G060500' => 'cil', 'CiPaw.09G123800' => 'cil', 'CiPaw.11G169700' => 'cil', 'CiPaw.12G118300' => 'cil', 'CiPaw.15G071000' => 'cil', 'CiPaw.15G081900' => 'cil', 'ClCG01G024610' => 'cla', 'ClCG03G006070' => 'cla', 'ClCG05G019250' => 'cla', 'ClCG09G009500' => 'cla', 'ClCG11G008200' => 'cla', 'ClCG11G018080' => 'cla', 'COL.COLO4_17373' => 'col', 'COL.COLO4_22994' => 'col', 'COL.COLO4_26389' => 'col', 'COL.COLO4_27170' => 'col', 'COL.COLO4_31074' => 'col', 'COL.COLO4_31465' => 'col', 'COL.COLO4_36438' => 'col', 'COL.COLO4_36439' => 'col', 'Cpa.g.c38781' => 'cpa', 'Cpa.g.sc128.12' => 'cpa', 'Cpa.g.sc166.7' => 'cpa', 'Cpa.g.sc166.8' => 'cpa', 'Cpa.g.sc20.111' => 'cpa', 'Cpa.g.sc27.31' => 'cpa', 'Cpa.g.sc64.36' => 'cpa', 'Cpa.g.sc64.37' => 'cpa', 'Cpa.g.sc66.49' => 'cpa', 'Cpa.g.sc80.64' => 'cpa', 'CsaV3_1G012320' => 'csa', 'CsaV3_2G008480' => 'csa', 'CsaV3_2G033450' => 'csa', 'CsaV3_3G044830' => 'csa', 'CsaV3_4G033710' => 'csa', 'CsaV3_6G051730' => 'csa', 'CsaV3_7G025350' => 'csa', 'CSS0001067' => 'camsi', 'CSS0005996' => 'camsi', 'CSS0006590' => 'camsi', 'CSS0009673' => 'camsi', 'CSS0010201' => 'camsi', 'CSS0010549' => 'camsi', 'CSS0011364' => 'camsi', 'CSS0014473' => 'camsi', 'CSS0014961' => 'camsi', 'CSS0020191' => 'camsi', 'CSS0021165' => 'camsi', 'CSS0022306' => 'camsi', 'CSS0030591' => 'camsi', 'CSS0030696' => 'camsi', 'CSS0032653' => 'camsi', 'CSS0037487' => 'camsi', 'CSS0041102' => 'camsi', 'CSS0041261' => 'camsi', 'CSS0046246' => 'camsi', 'CSS0049256' => 'camsi', 'DCAR_004075' => 'dca', 'DCAR_011538' => 'dca', 'DCAR_019553' => 'dca', 'DCAR_020952' => 'dca', 'DCAR_021739' => 'dca', 'DCAR_027407' => 'dca', 'DCAR_027913' => 'dca', 'DCAR_028066' => 'dca', 'Dinv05899' => 'din', 'Dinv07563' => 'din', 'Dinv08010' => 'din', 'Dinv14125' => 'din', 'Dinv20172' => 'din', 'Dinv30743' => 'din', 'Dinv31229' => 'din', 'Dinv34162' => 'din', 'Dinv36028' => 'din', 'Dinv39368' => 'din', 'Dinv40565' => 'din', 'Dinv41706' => 'din', 'Duzib052G0089' => 'dzi', 'Duzib116G0641' => 'dzi', 'Duzib132G0069' => 'dzi', 'Duzib132G1219' => 'dzi', 'Duzib147G0278' => 'dzi', 'Duzib160G0480' => 'dzi', 'Duzib170G0661' => 'dzi', 'Duzib177G0591' => 'dzi', 'Duzib187G1353' => 'dzi', 'Duzib192G0858' => 'dzi', 'Duzib192G0883' => 'dzi', 'Duzib213G0506' => 'dzi', 'Duzib235G0289' => 'dzi', 'Duzib251G0422' => 'dzi', 'ECA232G3898' => 'eca', 'ECA233G5950' => 'eca', 'ECA234G1699' => 'eca', 'ECA234G2421' => 'eca', 'ECA236G0426' => 'eca', 'ECA236G4331' => 'eca', 'ECA248G2573' => 'eca', 'EL10Ac1g00077' => 'bvu', 'EL10Ac1g01746' => 'bvu', 'EL10Ac2g03464' => 'bvu', 'EL10Ac4g08176' => 'bvu', 'EL10Ac7g17521' => 'bvu', 'EL10Ac8g20386' => 'bvu', 'EL10Ac9g21343' => 'bvu', 'EL10Ac9g22688' => 'bvu', 'Eucgr.B03434' => 'egr', 'Eucgr.D00618' => 'egr', 'Eucgr.E02395' => 'egr', 'Eucgr.F01129' => 'egr', 'Eucgr.F02622' => 'egr', 'Eucgr.F04207' => 'egr', 'FAN01G0570' => 'fan', 'FAN03G3351' => 'fan', 'FAN06G3702' => 'fan', 'FAN07G2149' => 'fan', 'FAN10G3758' => 'fan', 'FAN11G1170' => 'fan', 'FAN11G2050' => 'fan', 'FAN11G2724' => 'fan', 'FAN12G1700' => 'fan', 'FAN12G2028' => 'fan', 'FAN15G1160' => 'fan', 'FAN15G3063' => 'fan', 'FAN16G2540' => 'fan', 'FAN16G3077' => 'fan', 'FAN16G3624' => 'fan', 'FAN17G0221' => 'fan', 'FAN20G2492' => 'fan', 'FAN20G2905' => 'fan', 'FAN21G0548' => 'fan', 'FAN21G1300' => 'fan', 'FAN22G0077' => 'fan', 'FAN22G1315' => 'fan', 'FAN24G1280' => 'fan', 'FAN24G1445' => 'fan', 'FAN24G3527' => 'fan', 'FAN25G0464' => 'fan', 'FAN25G2885' => 'fan', 'FAN25G3270' => 'fan', 'FAN27G1101' => 'fan', 'FAN27G2846' => 'fan', 'FAN27G3524' => 'fan', 'FvH4_2g11770' => 'fve', 'FvH4_2g15630' => 'fve', 'FvH4_3g05570' => 'fve', 'FvH4_3g09110' => 'fve', 'FvH4_3g19940' => 'fve', 'FvH4_4g04821' => 'fve', 'FvH4_4g31480' => 'fve', 'FvH4_7g01740' => 'fve', 'Glyma.05G130400' => 'gma', 'Glyma.05G156400' => 'gma', 'Glyma.07G197000' => 'gma', 'Glyma.08G085151' => 'gma', 'Glyma.08G114500' => 'gma', 'Glyma.08G300400' => 'gma', 'Glyma.10G215800' => 'gma', 'Glyma.12G224400' => 'gma', 'Glyma.13G179300' => 'gma', 'Glyma.13G218151' => 'gma', 'Glyma.13G238800' => 'gma', 'Glyma.13G276900' => 'gma', 'Glyma.14G078200' => 'gma', 'Glyma.15G074500' => 'gma', 'Glyma.15G094100' => 'gma', 'Glyma.17G247200' => 'gma', 'Glyma.18G120100' => 'gma', 'Glyma.20G176000' => 'gma', 'Gohir.A01G063600' => 'ghi', 'Gohir.A01G170301' => 'ghi', 'Gohir.A02G060500' => 'ghi', 'Gohir.A05G133850' => 'ghi', 'Gohir.A05G161400' => 'ghi', 'Gohir.A06G012900' => 'ghi', 'Gohir.A06G035901' => 'ghi', 'Gohir.A06G127100' => 'ghi', 'Gohir.A06G210500' => 'ghi', 'Gohir.A08G008650' => 'ghi', 'Gohir.A09G072700' => 'ghi', 'Gohir.A09G088301' => 'ghi', 'Gohir.A10G040600' => 'ghi', 'Gohir.A12G036300' => 'ghi', 'Gohir.A12G143350' => 'ghi', 'Gohir.A12G165500' => 'ghi', 'Gohir.A13G145700' => 'ghi', 'Gohir.D01G050000' => 'ghi', 'Gohir.D01G051366' => 'ghi', 'Gohir.D01G161350' => 'ghi', 'Gohir.D02G065900' => 'ghi', 'Gohir.D05G164200' => 'ghi', 'Gohir.D05G355500' => 'ghi', 'Gohir.D06G010400' => 'ghi', 'Gohir.D06G111250' => 'ghi', 'Gohir.D06G132000' => 'ghi', 'Gohir.D06G210500' => 'ghi', 'Gohir.D07G165675' => 'ghi', 'Gohir.D08G062240' => 'ghi', 'Gohir.D08G086101' => 'ghi', 'Gohir.D08G138060' => 'ghi', 'Gohir.D09G072300' => 'ghi', 'Gohir.D10G041400' => 'ghi', 'Gohir.D11G191020' => 'ghi', 'Gohir.D11G212066' => 'ghi', 'Gohir.D12G036300' => 'ghi', 'Gohir.D12G168600' => 'ghi', 'Gohir.D13G150600' => 'ghi', 'Gorai.001G057300' => 'gra', 'Gorai.002G069900' => 'gra', 'Gorai.002G200000' => 'gra', 'Gorai.003G067600' => 'gra', 'Gorai.005G074800' => 'gra', 'Gorai.006G087300' => 'gra', 'Gorai.008G037500' => 'gra', 'Gorai.008G181400' => 'gra', 'Gorai.009G169400' => 'gra', 'Gorai.009G387900' => 'gra', 'Gorai.010G013300' => 'gra', 'Gorai.010G153800' => 'gra', 'Gorai.010G255800' => 'gra', 'Gorai.011G043700' => 'gra', 'Gorai.011G198900' => 'gra', 'Gorai.013G168400' => 'gra', 'GSVIVG01005212001' => 'vvi', 'GSVIVG01006163001' => 'vvi', 'GSVIVG01009625001' => 'vvi', 'GSVIVG01014338001' => 'vvi', 'GSVIVG01020005001' => 'vvi', 'GSVIVG01021450001' => 'vvi', 'GSVIVG01023975001' => 'vvi', 'GSVIVG01034490001' => 'vvi', 'HanXRQChr04g0112071' => 'han', 'HanXRQChr05g0131151' => 'han', 'HanXRQChr09g0262371' => 'han', 'HanXRQChr09g0268401' => 'han', 'HanXRQChr10g0279241' => 'han', 'HanXRQChr10g0297961' => 'han', 'HanXRQChr11g0326231' => 'han', 'HanXRQChr11g0328471' => 'han', 'HanXRQChr16g0507941' => 'han', 'HanXRQChr17g0560211' => 'han', 'Haze_02108' => 'cav', 'Haze_02428' => 'cav', 'Haze_05593' => 'cav', 'Haze_06448' => 'cav', 'Haze_09427' => 'cav', 'Haze_12022' => 'cav', 'Haze_17612' => 'cav', 'Haze_17928' => 'cav', 'Hma1.2p1_0032F.1_g019250' => 'hma', 'Hma1.2p1_0163F.1_g072690' => 'hma', 'Hma1.2p1_0265F.1_g106710' => 'hma', 'Hma1.2p1_0286F.1_g113970' => 'hma', 'Hma1.2p1_0363F.1_g136640' => 'hma', 'Hma1.2p1_0584F.1_g183470' => 'hma', 'Hma1.2p1_0885F.1_g232570' => 'hma', 'HPP92_006022' => 'vpl', 'HPP92_007320' => 'vpl', 'HPP92_011521' => 'vpl', 'HPP92_019387' => 'vpl', 'HPP92_024038' => 'vpl', 'Hund05891' => 'sun', 'Hund06450' => 'sun', 'Hund12053' => 'sun', 'Hund16800' => 'sun', 'Hund21222' => 'sun', 'Hund22896' => 'sun', 'Hund23746' => 'sun', 'Hund27083' => 'sun', 'Lalb_Chr02g0141831' => 'lal', 'Lalb_Chr02g0141841' => 'lal', 'Lalb_Chr05g0220411' => 'lal', 'Lalb_Chr06g0162081' => 'lal', 'Lalb_Chr09g0327651' => 'lal', 'Lalb_Chr13g0295051' => 'lal', 'Lalb_Chr15g0086801' => 'lal', 'Lalb_Chr16g0383781' => 'lal', 'Lalb_Chr16g0383791' => 'lal', 'Lalb_Chr18g0055441' => 'lal', 'Lalb_Chr18g0059611' => 'lal', 'Lalb_Chr20g0109661' => 'lal', 'Lalb_Chr20g0109831' => 'lal', 'Lalb_Chr20g0121871' => 'lal', 'Lalb_Chr22g0355361' => 'lal', 'Lalb_Chr25g0286371' => 'lal', 'Lj1A1187G43' => 'lonja', 'Lj1A1205T50' => 'lonja', 'Lj1A800G33' => 'lonja', 'Lj1C1187T7' => 'lonja', 'Lj1C843T11' => 'lonja', 'Lj1g0010940' => 'lja', 'Lj2A288T69' => 'lonja', 'Lj3g0024276' => 'lja', 'Lj4A47T76' => 'lonja', 'Lj4g0005805' => 'lja', 'Lj4g0006097' => 'lja', 'Lj4g0008528' => 'lja', 'Lj4g0024907' => 'lja', 'Lj5g0012472' => 'lja', 'Lj5g0018648' => 'lja', 'Lj6C789G1' => 'lonja', 'Lj6g0004000' => 'lja', 'Lj7A292G67' => 'lonja', 'Lj7A292T64' => 'lonja', 'Lj9A400T58' => 'lonja', 'Lsat_1_v5_gn_1_126181' => 'lsa', 'Lsat_1_v5_gn_4_123041' => 'lsa', 'Lsat_1_v5_gn_4_133620' => 'lsa', 'Lsat_1_v5_gn_4_53221' => 'lsa', 'Lsat_1_v5_gn_4_71961' => 'lsa', 'Lsat_1_v5_gn_7_105241' => 'lsa', 'Lsat_1_v5_gn_7_21361' => 'lsa', 'Lsat_1_v5_gn_7_28860' => 'lsa', 'Lsat_1_v5_gn_7_31260' => 'lsa', 'Lsat_1_v5_gn_8_52801' => 'lsa', 'Manes.02G191400' => 'mes', 'Manes.03G110100' => 'mes', 'Manes.04G071100' => 'mes', 'Manes.05G100500' => 'mes', 'Manes.05G164700' => 'mes', 'Manes.15G087000' => 'mes', 'Manes.15G121500' => 'mes', 'Manes.16G028300' => 'mes', 'Manes.17G046100' => 'mes', 'Manes.17G069800' => 'mes', 'Manes.18G100500' => 'mes', 'Mapoly0002s0109' => 'mpo', 'Mapoly0024s0007' => 'mpo', 'Mapoly0089s0032' => 'mpo', 'MBI04_g42241_MAGBIO' => 'mbi', 'MBI05_g11988_MAGBIO' => 'mbi', 'MBI05_g35452_MAGBIO' => 'mbi', 'MBI07_g30179_MAGBIO' => 'mbi', 'MBI07_g35859_MAGBIO' => 'mbi', 'MBI07_g35860_MAGBIO' => 'mbi', 'MBI07_g37166_MAGBIO' => 'mbi', 'MBI08_g18172_MAGBIO' => 'mbi', 'MBI09_g08441_MAGBIO' => 'mbi', 'MBI13_g01676_MAGBIO' => 'mbi', 'MBI14_g42955_MAGBIO' => 'mbi', 'MBI16_g13161_MAGBIO' => 'mbi', 'MBI17_g27204_MAGBIO' => 'mbi', 'MBI19_g21595_MAGBIO' => 'mbi', 'MD00G1148400' => 'mdo', 'MD02G1301200' => 'mdo', 'MD03G1227800' => 'mdo', 'MD05G1041100' => 'mdo', 'MD05G1124800' => 'mdo', 'MD05G1284000' => 'mdo', 'MD05G1338800' => 'mdo', 'MD05G1338900' => 'mdo', 'MD07G1022800' => 'mdo', 'MD10G1047500' => 'mdo', 'MD10G1127500' => 'mdo', 'MD10G1262300' => 'mdo', 'MD10G1293800' => 'mdo', 'MD16G1074300' => 'mdo', 'Medtr1g021670' => 'mtr', 'Medtr1g096320' => 'mtr', 'Medtr2g013690' => 'mtr', 'Medtr2g019450' => 'mtr', 'Medtr2g085170' => 'mtr', 'Medtr4g088785' => 'mtr', 'Medtr8g055930' => 'mtr', 'Medtr8g085850' => 'mtr', 'MELO3C002605.2' => 'cme', 'MELO3C003891.2' => 'cme', 'MELO3C004012.2' => 'cme', 'MELO3C007134.2' => 'cme', 'MELO3C008118.2' => 'cme', 'MELO3C016700.2' => 'cme', 'MELO3C024127.2' => 'cme', 'MELO3C033361.2' => 'cme', 'MELO3C033362.2' => 'cme', 'Migut.C00430' => 'egut', 'Migut.C01246' => 'egut', 'Migut.E00101' => 'egut', 'Migut.H01486' => 'egut', 'Migut.H01939' => 'egut', 'Migut.K00360' => 'egut', 'Migut.M00910' => 'egut', 'Migut.M01139' => 'egut', 'Migut.N02677' => 'egut', 'MSTRG.13252' => 'ama', 'MSTRG.14701' => 'ama', 'MSTRG.1521' => 'ama', 'MSTRG.15884' => 'ama', 'MSTRG.16242' => 'ama', 'MSTRG.22285' => 'ama', 'MSTRG.22444' => 'ama', 'MSTRG.2349' => 'ama', 'MSTRG.26308' => 'ama', 'MSTRG.28296' => 'ama', 'MSTRG.9895' => 'ama', 'Nitab4.5_0000110g0060' => 'nta', 'Nitab4.5_0000420g0130' => 'nta', 'Nitab4.5_0000422g0030' => 'nta', 'Nitab4.5_0000560g0180' => 'nta', 'Nitab4.5_0000703g0100' => 'nta', 'Nitab4.5_0000786g0200' => 'nta', 'Nitab4.5_0001336g0020' => 'nta', 'Nitab4.5_0001796g0030' => 'nta', 'Nitab4.5_0003348g0060' => 'nta', 'Nitab4.5_0003698g0040' => 'nta', 'Nitab4.5_0003942g0090' => 'nta', 'Nitab4.5_0004775g0070' => 'nta', 'Nitab4.5_0004864g0030' => 'nta', 'Nitab4.5_0005615g0020' => 'nta', 'Nitab4.5_0009288g0030' => 'nta', 'Nitab4.5_0009341g0010' => 'nta', 'Nitab4.5_0009535g0010' => 'nta', 'Nn1g03995' => 'nnu', 'Nn1g04100' => 'nnu', 'Nn1g06530' => 'nnu', 'Nn3g16404' => 'nnu', 'Nn3g17212' => 'nnu', 'Nn3g20776' => 'nnu', 'Nn3g21923' => 'nnu', 'Nn5g27737' => 'nnu', 'Nn5g29461' => 'nnu', 'Nn7g38355' => 'nnu', 'Nn8g39873' => 'nnu', 'Oeu000548.2' => 'oeu', 'Oeu004672.1' => 'oeu', 'Oeu015605.2' => 'oeu', 'Oeu016092.1' => 'oeu', 'Oeu017879.3' => 'oeu', 'Oeu024910.1' => 'oeu', 'Oeu028965.1' => 'oeu', 'Oeu031269.1' => 'oeu', 'Oeu031270.1' => 'oeu', 'Oeu032535.1' => 'oeu', 'Oeu034151.1' => 'oeu', 'Oeu034152.1' => 'oeu', 'Oeu034588.2' => 'oeu', 'Oeu050846.1' => 'oeu', 'Oeu050849.2' => 'oeu', 'Oeu051063.2' => 'oeu', 'Oeu052368.1' => 'oeu', 'Oeu052370.1' => 'oeu', 'Os01g0210400' => 'osa', 'Os01g0304300' => 'osa', 'Os01g0749100' => 'osa', 'Os02g0745800' => 'osa', 'Os03g0769050' => 'osa', 'Os05g0531500' => 'osa', 'Os06g0724300' => 'osa', 'Os11g0198100' => 'osa', 'Peaxi162Scf00069g01425' => 'pax', 'Peaxi162Scf00280g00811' => 'pax', 'Peaxi162Scf00310g00615' => 'pax', 'Peaxi162Scf00362g00542' => 'pax', 'Peaxi162Scf00461g00310' => 'pax', 'Peaxi162Scf00530g00118' => 'pax', 'Peaxi162Scf00541g00057' => 'pax', 'Peaxi162Scf00661g00017' => 'pax', 'Peaxi162Scf00926g00027' => 'pax', 'Peaxi162Scf01064g00263' => 'pax', 'Peaxi162Scf01211g00135' => 'pax', 'PGR004G2336' => 'pgr', 'PGR042G0327' => 'pgr', 'PGR042G1957' => 'pgr', 'PGR042G2003' => 'pgr', 'PGR042G3929' => 'pgr', 'PGR083G1137' => 'pgr', 'PGR083G1364' => 'pgr', 'PGSC0003DMG400003381' => 'stu', 'PGSC0003DMG400003417' => 'stu', 'PGSC0003DMG400008981' => 'stu', 'PGSC0003DMG400012417' => 'stu', 'PGSC0003DMG400012823' => 'stu', 'PGSC0003DMG400016885' => 'stu', 'PGSC0003DMG400022812' => 'stu', 'PGSC0003DMG400029726' => 'stu', 'PGSC0003DMG401009243' => 'stu', 'PGSC0003DMG401031505' => 'stu', 'PGSC0003DMG402031505' => 'stu', 'Phvul.001G017600' => 'pvu', 'Phvul.002G193500' => 'pvu', 'Phvul.002G228900' => 'pvu', 'Phvul.002G236800' => 'pvu', 'Phvul.003G049500' => 'pvu', 'Phvul.005G072000' => 'pvu', 'Phvul.006G164800' => 'pvu', 'Phvul.006G185100' => 'pvu', 'Phvul.007G090000' => 'pvu', 'Potri.001G399800' => 'ptr', 'Potri.002G149900' => 'ptr', 'Potri.004G044100' => 'ptr', 'Potri.004G177600' => 'ptr', 'Potri.009G138000' => 'ptr', 'Potri.010G094000' => 'ptr', 'Potri.011G053000' => 'ptr', 'Potri.011G119300' => 'ptr', 'Potri.013G113700' => 'ptr', 'Potri.018G107800' => 'ptr', 'Potri.019G084100' => 'ptr', 'Pp3c14_23720' => 'ppa', 'Pp3c16_6340' => 'ppa', 'Pp3c23_13420' => 'ppa', 'Pp3c24_2740' => 'ppa', 'Pp3c25_860' => 'ppa', 'Pp3c8_21750' => 'ppa', 'Prupe.1G273000' => 'ppe', 'Prupe.1G273700' => 'ppe', 'Prupe.1G274100' => 'ppe', 'Prupe.2G023300' => 'ppe', 'Prupe.4G048000' => 'ppe', 'Prupe.4G080400' => 'ppe', 'Prupe.4G181200' => 'ppe', 'Prupe.8G056900' => 'ppe', 'Prupe.8G168700' => 'ppe', 'Psat1g189080' => 'psa', 'Psat1g204760' => 'psa', 'Psat4g175560' => 'psa', 'Psat4g177720' => 'psa', 'Psat5g244240' => 'psa', 'Psat6g010720' => 'psa', 'Psat6g187200' => 'psa', 'Psat7g072040' => 'psa', 'PSO017G3501' => 'pso', 'PSO063G2148' => 'pso', 'PSO063G5608' => 'pso', 'PSO210G6392' => 'pso', 'PSO541G2319' => 'pso', 'PSO541G2836' => 'pso', 'PSO541G4012' => 'pso', 'PSO541G6253' => 'pso', 'PSO675G0580' => 'pso', 'PSO675G0856' => 'pso', 'PSO675G5635' => 'pso', 'PSO675G9157' => 'pso', 'PSO832G1660' => 'pso', 'PSO832G1969' => 'pso', 'QL02p007186' => 'qlo', 'QL02p033904' => 'qlo', 'QL03p064391' => 'qlo', 'QL05p040593' => 'qlo', 'QL05p058242' => 'qlo', 'QL08p021825' => 'qlo', 'QL11p004981' => 'qlo', 'RcHm_v2.0_Chr1g0318301' => 'rch', 'RcHm_v2.0_Chr4g0418501' => 'rch', 'RcHm_v2.0_Chr4g0439971' => 'rch', 'RcHm_v2.0_Chr5g0008541' => 'rch', 'RcHm_v2.0_Chr5g0014101' => 'rch', 'RcHm_v2.0_Chr5g0014131' => 'rch', 'RcHm_v2.0_Chr5g0033621' => 'rch', 'RcHm_v2.0_Chr6g0272041' => 'rch', 'RcHm_v2.0_Chr6g0278831' => 'rch', 'Rhsim02G0130400' => 'rsi', 'Rhsim02G0171100' => 'rsi', 'Rhsim05G0053000' => 'rsi', 'Rhsim05G0053100' => 'rsi', 'Rhsim06G0096500' => 'rsi', 'Rhsim06G0096600' => 'rsi', 'Rhsim06G0199100' => 'rsi', 'Rhsim12G0062300' => 'rsi', 'Rhsim12G0062800' => 'rsi', 'Sabra02G0118600' => 'sbr', 'Sabra04G0027300' => 'sbr', 'Sabra04G0119500' => 'sbr', 'Sabra08G0112500' => 'sbr', 'Sabra11G0036800' => 'sbr', 'Sabra11G0103800' => 'sbr', 'Sabra13G0096300' => 'sbr', 'Sabra16G0262300' => 'sbr', 'Sabra18G0091700' => 'sbr', 'Sabra19G0095400' => 'sbr', 'SalBow6G3080' => 'sbo', 'SalBow7G1157' => 'sbo', 'SalBow7G2123' => 'sbo', 'SalBow7G2285' => 'sbo', 'SalBow7G3537' => 'sbo', 'SalBow8G2947' => 'sbo', 'SalBow8G4463' => 'sbo', 'SalBow8G5466' => 'sbo', 'Sc01g0001750' => 'sci', 'Sc02g0006640' => 'sci', 'Sc02g0006670' => 'sci', 'Sc04g0008220' => 'sci', 'Sc05g0006190' => 'sci', 'Sc08g0002760' => 'sci', 'Sc17g0006170' => 'sci', 'Sc22g0002050' => 'sci', 'Sc23g0001190' => 'sci', 'Sc24g0000980' => 'sci', 'Sed0006245' => 'sed', 'Sed0007543' => 'sed', 'Sed0009411' => 'sed', 'Sed0010765' => 'sed', 'Sed0012944' => 'sed', 'Sed0014682' => 'sed', 'Sed0016174' => 'sed', 'Sed0016796' => 'sed', 'Sed0020317' => 'sed', 'Sed0021467' => 'sed', 'SEGI_01316' => 'sgi', 'SEGI_03374' => 'sgi', 'SEGI_16265' => 'sgi', 'SEGI_18569' => 'sgi', 'SEGI_20351' => 'sgi', 'SEGI_26395' => 'sgi', 'SEGI_29469' => 'sgi', 'SEGI_34771' => 'sgi', 'SEGI_36769' => 'sgi', 'SEGI_37139' => 'sgi', 'SGA_v2.0_scaffold100G29687' => 'sas', 'SGA_v2.0_scaffold118G32472' => 'sas', 'SGA_v2.0_scaffold14G07051' => 'sas', 'SGA_v2.0_scaffold183G39845' => 'sas', 'SGA_v2.0_scaffold1G00174' => 'sas', 'SGA_v2.0_scaffold22G09714' => 'sas', 'SGA_v2.0_scaffold333G48992' => 'sas', 'SGA_v2.0_scaffold46G17491' => 'sas', 'SGA_v2.0_scaffold49G18294' => 'sas', 'SGA_v2.0_scaffold63G21658' => 'sas', 'SHI01741' => 'shi', 'SHI05771' => 'shi', 'SHI18077' => 'shi', 'SHI20525' => 'shi', 'SHI20527' => 'shi', 'SHI20528' => 'shi', 'SMO172G0185' => 'smo', 'SMO198G0020' => 'smo', 'SMO351G0006' => 'smo', 'SMO356G0118' => 'smo', 'SMO358G0296' => 'smo', 'SMO367G0079' => 'smo', 'SMO367G1277' => 'smo', 'Solyc01g014220.3' => 'sly', 'Solyc01g111770.2' => 'sly', 'Solyc02g078180.3' => 'sly', 'Solyc03g006430.3' => 'sly', 'Solyc03g006456.1' => 'sly', 'Solyc03g079860.2' => 'sly', 'Solyc04g079770.3' => 'sly', 'Solyc05g007430.4' => 'sly', 'Solyc07g063150.3' => 'sly', 'Solyc08g016620.3' => 'sly', 'Solyc09g057590.3' => 'sly', 'Solyc09g057600.1' => 'sly', 'Solyc10g009050.3' => 'sly', 'Solyc11g017420.2' => 'sly', 'Sopen01g053810' => 'spe', 'Sopen02g023040' => 'spe', 'Sopen03g002440' => 'spe', 'Sopen04g033350' => 'spe', 'Sopen05g003310' => 'spe', 'Sopen07g004050' => 'spe', 'Sopen07g031340' => 'spe', 'Sopen08g006990' => 'spe', 'Sopen10g004830' => 'spe', 'Sopen11g009370' => 'spe', 'Sp1g24450' => 'spa', 'Sp1g29670' => 'spa', 'Sp1g39600' => 'spa', 'Sp2g11080' => 'spa', 'Sp2g13970' => 'spa', 'Sp4g16130' => 'spa', 'Sp6g13080' => 'spa', 'Sp7g37270' => 'spa', 'TAR371G0065' => 'tar', 'TAR376G0340' => 'tar', 'TAR376G0435' => 'tar', 'TAR381G0002' => 'tar', 'TAR381G1236' => 'tar', 'TAR624G0055' => 'tar', 'TAR624G0324' => 'tar', 'TAR624G0696' => 'tar', 'TAR624G0906' => 'tar', 'TAR625G0107' => 'tar', 'TAR626G0015' => 'tar', 'TAR626G1356' => 'tar', 'TAR627G0888' => 'tar', 'TAR628G0399' => 'tar', 'TAR628G1327' => 'tar', 'TAR629G2831' => 'tar', 'TAR629G2874' => 'tar', 'TAR633G1432' => 'tar', 'TAR633G2771' => 'tar', 'THA.LOC104803394' => 'tha', 'THA.LOC104805153' => 'tha', 'THA.LOC104806784' => 'tha', 'THA.LOC104810473' => 'tha', 'THA.LOC104813100' => 'tha', 'THA.LOC104814215' => 'tha', 'THA.LOC104815554' => 'tha', 'THA.LOC104820544' => 'tha', 'THA.LOC104824754' => 'tha', 'THA.LOC104827717' => 'tha', 'Thecc.02G031400' => 'tca', 'Thecc.02G055900' => 'tca', 'Thecc.02G350800' => 'tca', 'Thecc.06G150900' => 'tca', 'Thecc.06G186600' => 'tca', 'Thecc.07G089600' => 'tca', 'Thecc.08G020400' => 'tca', 'Thecc.08G182100' => 'tca', 'Thhalv10000873m.g' => 'esa', 'Thhalv10004185m.g' => 'esa', 'Thhalv10006981m.g' => 'esa', 'Thhalv10007204m.g' => 'esa', 'Thhalv10011374m.g' => 'esa', 'Thhalv10013482m.g' => 'esa', 'Thhalv10017801m.g' => 'esa', 'Thhalv10024983m.g' => 'esa', 'TPR.G12072' => 'tpr', 'TPR.G15769' => 'tpr', 'TPR.G16504' => 'tpr', 'TPR.G16506' => 'tpr', 'TPR.G24345' => 'tpr', 'TPR.G26666' => 'tpr', 'TPR.G27320' => 'tpr', 'TPR.G31819' => 'tpr', 'TPR.G38879' => 'tpr', 'TPR.G39015' => 'tpr', 'TPR.G8819' => 'tpr', 'TWI09G0924' => 'twi', 'TWI12G0811' => 'twi', 'TWI12G1294' => 'twi', 'TWI31G0150' => 'twi', 'TWI36G1262' => 'twi', 'TWI38G1287' => 'twi', 'TWI38G1633' => 'twi', 'TWI38G1982' => 'twi', 'TWI39G0116' => 'twi', 'TWI60G1011' => 'twi', 'TWI63G0171' => 'twi', 'TWI73G0839' => 'twi', 'TWI79G1511' => 'twi', 'unitig_0.g915' => 'ugi', 'unitig_0.g916' => 'ugi', 'unitig_21.g20219' => 'ugi', 'unitig_21.g20416' => 'ugi', 'unitig_578.g16132' => 'ugi', 'unitig_578.g16718' => 'ugi', 'unitig_62.g23481' => 'ugi', 'unitig_744.g24535' => 'ugi', 'unitig_749.g13525' => 'ugi', 'vmacro01248' => 'vma', 'vmacro02290' => 'vma', 'vmacro10946' => 'vma', 'vmacro11865' => 'vma', 'vmacro12493' => 'vma', 'vmacro17322' => 'vma', 'vmacro21599' => 'vma', 'vmacro23041' => 'vma', 'VMungo0251G0004' => 'vmu', 'VMungo0251G2639' => 'vmu', 'VMungo0251G2967' => 'vmu', 'VMungo0540G0864' => 'vmu', 'VMungo0540G1569' => 'vmu', 'VMungo0647G0317' => 'vmu', 'VMungo0720G1373' => 'vmu', 'VMungo0720G1508' => 'vmu', 'VMungo1080G0485' => 'vmu', 'VMungo1215G3177' => 'vmu', 'Zm00001eb112600' => 'zma', 'Zm00001eb120220' => 'zma', 'Zm00001eb153240' => 'zma', 'Zm00001eb168880' => 'zma', 'Zm00001eb213920' => 'zma', 'Zm00001eb228280' => 'zma', 'Zm00001eb254580' => 'zma', 'Zm00001eb272180' => 'zma', 'Zm00001eb293190' => 'zma', 'Zm00001eb322930' => 'zma', 'Zm00001eb353360' => 'zma', 'Zm00001eb353390' => 'zma', 'Zm00001eb353430' => 'zma', 'Zm00001eb353440' => 'zma', 'Zm00001eb353780' => 'zma' ), 'gf_id' => 'HOM05D000499', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000499' ), 'data_identifier' => 'HOM05D000499', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000499', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1066', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p29780' => 'bna', 'A02p33180' => 'bna', 'A03p16470' => 'bna', 'A03p66010' => 'bna', 'A04p25970' => 'bna', 'A06p01270' => 'bna', 'A06p46080' => 'bna', 'A07p11400' => 'bna', 'A08p01840' => 'bna', 'A08p08230' => 'bna', 'A08p25740' => 'bna', 'A09p32070' => 'bna', 'A09p37830' => 'bna', 'A09p42840' => 'bna', 'A09p42850' => 'bna', 'Aa31LG10G2060' => 'aar', 'Aa31LG2G7410' => 'aar', 'Aa31LG6G10200' => 'aar', 'Aa31LG6G16680' => 'aar', 'Aa31LG6G8470' => 'aar', 'Aa31LG9G12730' => 'aar', 'Aa31LG9G13680' => 'aar', 'Aa31LG9G14920' => 'aar', 'Aa31LG9G6650' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4977' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5467' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3254' => 'aag', 'Actinidia02578' => 'ach', 'Actinidia07693' => 'ach', 'Actinidia08413' => 'ach', 'Actinidia08414' => 'ach', 'Actinidia15289' => 'ach', 'Actinidia19871' => 'ach', 'Actinidia21475' => 'ach', 'Actinidia22576' => 'ach', 'Actinidia28327' => 'ach', 'Actinidia32491' => 'ach', 'Actinidia39463' => 'ach', 'Actinidia39571' => 'ach', 'Ah.01g013750' => 'amhyb', 'Ah.01g023210' => 'amhyb', 'Ah.04g164850' => 'amhyb', 'Ah.05g178060' => 'amhyb', 'Ah.07g204270' => 'amhyb', 'Ah.07g208480' => 'amhyb', 'Ah.09g237410' => 'amhyb', 'Ah.14g089460' => 'amhyb', 'AL1G41790' => 'aly', 'AL1G49050' => 'aly', 'AL1G53810' => 'aly', 'AL1G61400' => 'aly', 'AL4G18580' => 'aly', 'AL5G12510' => 'aly', 'AL5G12540' => 'aly', 'AL6G43230' => 'aly', 'AL7G10370' => 'aly', 'AL7G19250' => 'aly', 'AL8G12240' => 'aly', 'AL8G18540' => 'aly', 'Aqoxy1G02409' => 'aox', 'Aqoxy2G03993' => 'aox', 'Aqoxy3G03357' => 'aox', 'Aqoxy4G00785' => 'aox', 'Aqoxy5G02598' => 'aox', 'Aqoxy6G00132' => 'aox', 'Aqoxy7G01776' => 'aox', 'Aqoxy7G02316' => 'aox', 'Aqoxy7G03973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.12AFKW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B8730' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27IQR1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3F75VG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3RE0GA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41TCQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.527VTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FIR39' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5W8UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DA38EV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ63HS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H1I32C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HC27T5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4M8AP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7N3CZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9UVDZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LS1NQA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT1D4B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SKC4TM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCFV76' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF9Q1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQWD9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1ZM88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WE07RT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YCK7VH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJE6Q6' => 'arhy', 'AT1G28240' => 'ath', 'AT1G34550' => 'ath', 'AT1G53040' => 'ath', 'AT2G02910' => 'ath', 'AT4G09630' => 'ath', 'AT4G38500' => 'ath', 'AT5G42660' => 'ath', 'AT5G46220' => 'ath', 'ATR0152G026' => 'atr', 'ATR0564G343' => 'atr', 'ATR0706G151' => 'atr', 'ATR0733G207' => 'atr', 'ATR0751G234' => 'atr', 'ATR0807G048' => 'atr', 'ATR1091G084' => 'atr', 'Atru.chr10.1229' => 'acertr', 'Atru.chr10.1230' => 'acertr', 'Atru.chr10.1874' => 'acertr', 'Atru.chr11.1808' => 'acertr', 'Atru.chr13.1795' => 'acertr', 'Atru.chr13.570' => 'acertr', 'Atru.chr2.2608' => 'acertr', 'Atru.chr2.2609' => 'acertr', 'Atru.chr5.3428' => 'acertr', 'Atru.chr8.1171' => 'acertr', 'AUR62004651' => 'cqu', 'AUR62008675' => 'cqu', 'AUR62010014' => 'cqu', 'AUR62013004' => 'cqu', 'AUR62014825' => 'cqu', 'AUR62015015' => 'cqu', 'AUR62015151' => 'cqu', 'AUR62017020' => 'cqu', 'AUR62019422' => 'cqu', 'AUR62023570' => 'cqu', 'AUR62025571' => 'cqu', 'AUR62029098' => 'cqu', 'AUR62033863' => 'cqu', 'AUR62034296' => 'cqu', 'AUR62040075' => 'cqu', 'BcaB02g07334' => 'bca', 'BcaB02g10575' => 'bca', 'BcaB03g12119' => 'bca', 'BcaB03g12120' => 'bca', 'BcaB03g13945' => 'bca', 'BcaB04g17123' => 'bca', 'BcaB04g17867' => 'bca', 'BcaB04g19839' => 'bca', 'BcaB07g30317' => 'bca', 'BcaB07g32432' => 'bca', 'BcaB07g33362' => 'bca', 'BcaB08g36611' => 'bca', 'BcaC01g00028' => 'bca', 'BcaC01g01356' => 'bca', 'BcaC01g02034' => 'bca', 'BcaC01g06051' => 'bca', 'BcaC03g16839' => 'bca', 'BcaC03g17176' => 'bca', 'BcaC05g26829' => 'bca', 'BcaC06g31490' => 'bca', 'BcaC06g35344' => 'bca', 'BcaC06g36570' => 'bca', 'BcaC07g37537' => 'bca', 'BcaC08g43491' => 'bca', 'BcaC08g43773' => 'bca', 'BcaNung00234' => 'bca', 'BcaNung01982' => 'bca', 'BcaNung03707' => 'bca', 'BcaNung06454' => 'bca', 'BolC2t10762H' => 'bol', 'BolC2t11191H' => 'bol', 'BolC3t14322H' => 'bol', 'BolC3t19747H' => 'bol', 'BolC3t21425H' => 'bol', 'BolC4t27800H' => 'bol', 'BolC5t31423H' => 'bol', 'BolC6t35951H' => 'bol', 'BolC6t36282H' => 'bol', 'BolC7t40678H' => 'bol', 'BolC7t40679H' => 'bol', 'BolC7t42222H' => 'bol', 'BolC7t43492H' => 'bol', 'BolC7t46785H' => 'bol', 'BolC8t47853H' => 'bol', 'BolC9t56805H' => 'bol', 'BraA02t08000Z' => 'bra', 'BraA02t08341Z' => 'bra', 'BraA03t10936Z' => 'bra', 'BraA03t15657Z' => 'bra', 'BraA04t18100Z' => 'bra', 'BraA05t20523Z' => 'bra', 'BraA06t23353Z' => 'bra', 'BraA06t27473Z' => 'bra', 'BraA06t27769Z' => 'bra', 'BraA07t28928Z' => 'bra', 'BraA08t32236Z' => 'bra', 'BraA08t32841Z' => 'bra', 'BraA08t34524Z' => 'bra', 'BraA09t38742Z' => 'bra', 'BraA09t39295Z' => 'bra', 'C02p47180' => 'bna', 'C02p50990' => 'bna', 'C03p19360' => 'bna', 'C03p74950' => 'bna', 'C03p91000' => 'bna', 'C04p63260' => 'bna', 'C05p27050' => 'bna', 'C06p08750' => 'bna', 'C06p11490' => 'bna', 'C07p02820' => 'bna', 'C07p17180' => 'bna', 'C07p29440' => 'bna', 'C07p63730' => 'bna', 'C09p39260' => 'bna', 'CAN.G1164.34' => 'can', 'CAN.G1164.39' => 'can', 'CAN.G1530.3' => 'can', 'CAN.G162.61' => 'can', 'CAN.G176.6' => 'can', 'CAN.G289.49' => 'can', 'CAN.G370.21' => 'can', 'CAN.G370.22' => 'can', 'CAN.G371.117' => 'can', 'CAN.G58.37' => 'can', 'CAN.G588.98' => 'can', 'CANSAT21G2266' => 'cansat', 'CANSAT25G2799' => 'cansat', 'CANSAT35G0862' => 'cansat', 'CANSAT35G1704' => 'cansat', 'CANSAT35G1760' => 'cansat', 'CANSAT56G3971' => 'cansat', 'CANSAT56G4116' => 'cansat', 'CANSAT80G1259' => 'cansat', 'CARHR027730' => 'chi', 'CARHR033880' => 'chi', 'CARHR043270' => 'chi', 'CARHR145330' => 'chi', 'CARHR145340' => 'chi', 'CARHR175570' => 'chi', 'CARHR181570' => 'chi', 'CARHR258470' => 'chi', 'CARHR260490' => 'chi', 'CARHR294220' => 'chi', 'Carub.0001s2668' => 'cru', 'Carub.0001s3257' => 'cru', 'Carub.0001s4220' => 'cru', 'Carub.0005s0179' => 'cru', 'Carub.0006s2807' => 'cru', 'Carub.0007s0039' => 'cru', 'Carub.0008s0169' => 'cru', 'Carub.0008s0636' => 'cru', 'Ca_00338_v3' => 'car', 'Ca_00542_v3' => 'car', 'Ca_01844_v3' => 'car', 'Ca_10611_v3' => 'car', 'Ca_13326_v3' => 'car', 'Ca_17944_v3' => 'car', 'Ca_18546_v3' => 'car', 'Ca_24219_v3' => 'car', 'Ca_29972_v3' => 'car', 'CBR_g3681' => 'cbr', 'CBR_g40021' => 'cbr', 'Cc01_g08140' => 'ccan', 'Cc02_g13410' => 'ccan', 'Cc02_g37480' => 'ccan', 'Cc05_g12030' => 'ccan', 'Cc09_g03370' => 'ccan', 'Cc09_g10300' => 'ccan', 'Cc10_g03530' => 'ccan', 'Cc10_g11380' => 'ccan', 'CDE01G0176' => 'cde', 'CDE02G0675' => 'cde', 'CDE02G0942' => 'cde', 'CDE02G1153' => 'cde', 'CDE02G4177' => 'cde', 'CDE04G2117' => 'cde', 'CDE04G2736' => 'cde', 'CDE08G1161' => 'cde', 'CDE09G1238' => 'cde', 'Cfa000467' => 'cfa', 'Cfa000947' => 'cfa', 'Cfa004969' => 'cfa', 'Cfa005284' => 'cfa', 'Cfa008993' => 'cfa', 'Cfa018187' => 'cfa', 'Cfa018454' => 'cfa', 'Cfa020585' => 'cfa', 'Ciclev10000424m.g' => 'ccl', 'Ciclev10003605m.g' => 'ccl', 'Ciclev10007828m.g' => 'ccl', 'Ciclev10014620m.g' => 'ccl', 'Ciclev10015169m.g' => 'ccl', 'Ciclev10018291m.g' => 'ccl', 'Ciclev10028256m.g' => 'ccl', 'Ciclev10033822m.g' => 'ccl', 'CiPaw.05G060300' => 'cil', 'CiPaw.05G085000' => 'cil', 'CiPaw.06G083700' => 'cil', 'CiPaw.06G120300' => 'cil', 'CiPaw.09G060500' => 'cil', 'CiPaw.09G123800' => 'cil', 'CiPaw.11G169700' => 'cil', 'CiPaw.12G118300' => 'cil', 'CiPaw.15G071000' => 'cil', 'CiPaw.15G081900' => 'cil', 'ClCG01G024610' => 'cla', 'ClCG03G006070' => 'cla', 'ClCG05G019250' => 'cla', 'ClCG09G009500' => 'cla', 'ClCG11G008200' => 'cla', 'ClCG11G018080' => 'cla', 'COL.COLO4_17373' => 'col', 'COL.COLO4_22994' => 'col', 'COL.COLO4_26389' => 'col', 'COL.COLO4_27170' => 'col', 'COL.COLO4_31074' => 'col', 'COL.COLO4_31465' => 'col', 'COL.COLO4_36438' => 'col', 'COL.COLO4_36439' => 'col', 'Cpa.g.c38781' => 'cpa', 'Cpa.g.sc128.12' => 'cpa', 'Cpa.g.sc166.7' => 'cpa', 'Cpa.g.sc166.8' => 'cpa', 'Cpa.g.sc20.111' => 'cpa', 'Cpa.g.sc27.31' => 'cpa', 'Cpa.g.sc64.36' => 'cpa', 'Cpa.g.sc64.37' => 'cpa', 'Cpa.g.sc66.49' => 'cpa', 'Cpa.g.sc80.64' => 'cpa', 'CsaV3_1G012320' => 'csa', 'CsaV3_2G008480' => 'csa', 'CsaV3_2G033450' => 'csa', 'CsaV3_3G044830' => 'csa', 'CsaV3_4G033710' => 'csa', 'CsaV3_6G051730' => 'csa', 'CsaV3_7G025350' => 'csa', 'CSS0001067' => 'camsi', 'CSS0005996' => 'camsi', 'CSS0006590' => 'camsi', 'CSS0009673' => 'camsi', 'CSS0010201' => 'camsi', 'CSS0010549' => 'camsi', 'CSS0011364' => 'camsi', 'CSS0014473' => 'camsi', 'CSS0014961' => 'camsi', 'CSS0020191' => 'camsi', 'CSS0021165' => 'camsi', 'CSS0022306' => 'camsi', 'CSS0030591' => 'camsi', 'CSS0030696' => 'camsi', 'CSS0032653' => 'camsi', 'CSS0037487' => 'camsi', 'CSS0041102' => 'camsi', 'CSS0041261' => 'camsi', 'CSS0046246' => 'camsi', 'CSS0049256' => 'camsi', 'DCAR_004075' => 'dca', 'DCAR_011538' => 'dca', 'DCAR_019553' => 'dca', 'DCAR_020952' => 'dca', 'DCAR_021739' => 'dca', 'DCAR_027407' => 'dca', 'DCAR_027913' => 'dca', 'DCAR_028066' => 'dca', 'Dinv05899' => 'din', 'Dinv07563' => 'din', 'Dinv08010' => 'din', 'Dinv14125' => 'din', 'Dinv20172' => 'din', 'Dinv30743' => 'din', 'Dinv31229' => 'din', 'Dinv34162' => 'din', 'Dinv36028' => 'din', 'Dinv39368' => 'din', 'Dinv40565' => 'din', 'Dinv41706' => 'din', 'Duzib052G0089' => 'dzi', 'Duzib116G0641' => 'dzi', 'Duzib132G0069' => 'dzi', 'Duzib132G1219' => 'dzi', 'Duzib147G0278' => 'dzi', 'Duzib160G0480' => 'dzi', 'Duzib170G0661' => 'dzi', 'Duzib177G0591' => 'dzi', 'Duzib187G1353' => 'dzi', 'Duzib192G0858' => 'dzi', 'Duzib192G0883' => 'dzi', 'Duzib213G0506' => 'dzi', 'Duzib235G0289' => 'dzi', 'Duzib251G0422' => 'dzi', 'ECA232G3898' => 'eca', 'ECA233G5950' => 'eca', 'ECA234G1699' => 'eca', 'ECA234G2421' => 'eca', 'ECA236G0426' => 'eca', 'ECA236G4331' => 'eca', 'ECA248G2573' => 'eca', 'EL10Ac1g00077' => 'bvu', 'EL10Ac1g01746' => 'bvu', 'EL10Ac2g03464' => 'bvu', 'EL10Ac4g08176' => 'bvu', 'EL10Ac7g17521' => 'bvu', 'EL10Ac8g20386' => 'bvu', 'EL10Ac9g21343' => 'bvu', 'EL10Ac9g22688' => 'bvu', 'Eucgr.B03434' => 'egr', 'Eucgr.D00618' => 'egr', 'Eucgr.E02395' => 'egr', 'Eucgr.F01129' => 'egr', 'Eucgr.F02622' => 'egr', 'Eucgr.F04207' => 'egr', 'FAN01G0570' => 'fan', 'FAN03G3351' => 'fan', 'FAN06G3702' => 'fan', 'FAN07G2149' => 'fan', 'FAN10G3758' => 'fan', 'FAN11G1170' => 'fan', 'FAN11G2050' => 'fan', 'FAN11G2724' => 'fan', 'FAN12G1700' => 'fan', 'FAN12G2028' => 'fan', 'FAN15G1160' => 'fan', 'FAN15G3063' => 'fan', 'FAN16G2540' => 'fan', 'FAN16G3077' => 'fan', 'FAN16G3624' => 'fan', 'FAN17G0221' => 'fan', 'FAN20G2492' => 'fan', 'FAN20G2905' => 'fan', 'FAN21G0548' => 'fan', 'FAN21G1300' => 'fan', 'FAN22G0077' => 'fan', 'FAN22G1315' => 'fan', 'FAN24G1280' => 'fan', 'FAN24G1445' => 'fan', 'FAN24G3527' => 'fan', 'FAN25G0464' => 'fan', 'FAN25G2885' => 'fan', 'FAN25G3270' => 'fan', 'FAN27G1101' => 'fan', 'FAN27G2846' => 'fan', 'FAN27G3524' => 'fan', 'FvH4_2g11770' => 'fve', 'FvH4_2g15630' => 'fve', 'FvH4_3g05570' => 'fve', 'FvH4_3g09110' => 'fve', 'FvH4_3g19940' => 'fve', 'FvH4_4g04821' => 'fve', 'FvH4_4g31480' => 'fve', 'FvH4_7g01740' => 'fve', 'Glyma.05G130400' => 'gma', 'Glyma.05G156400' => 'gma', 'Glyma.07G197000' => 'gma', 'Glyma.08G085151' => 'gma', 'Glyma.08G114500' => 'gma', 'Glyma.08G300400' => 'gma', 'Glyma.10G215800' => 'gma', 'Glyma.12G224400' => 'gma', 'Glyma.13G179300' => 'gma', 'Glyma.13G218151' => 'gma', 'Glyma.13G238800' => 'gma', 'Glyma.13G276900' => 'gma', 'Glyma.14G078200' => 'gma', 'Glyma.15G074500' => 'gma', 'Glyma.15G094100' => 'gma', 'Glyma.17G247200' => 'gma', 'Glyma.18G120100' => 'gma', 'Glyma.20G176000' => 'gma', 'Gohir.A01G063600' => 'ghi', 'Gohir.A01G170301' => 'ghi', 'Gohir.A02G060500' => 'ghi', 'Gohir.A05G133850' => 'ghi', 'Gohir.A05G161400' => 'ghi', 'Gohir.A06G012900' => 'ghi', 'Gohir.A06G035901' => 'ghi', 'Gohir.A06G127100' => 'ghi', 'Gohir.A06G210500' => 'ghi', 'Gohir.A08G008650' => 'ghi', 'Gohir.A09G072700' => 'ghi', 'Gohir.A09G088301' => 'ghi', 'Gohir.A10G040600' => 'ghi', 'Gohir.A12G036300' => 'ghi', 'Gohir.A12G143350' => 'ghi', 'Gohir.A12G165500' => 'ghi', 'Gohir.A13G145700' => 'ghi', 'Gohir.D01G050000' => 'ghi', 'Gohir.D01G051366' => 'ghi', 'Gohir.D01G161350' => 'ghi', 'Gohir.D02G065900' => 'ghi', 'Gohir.D05G164200' => 'ghi', 'Gohir.D05G355500' => 'ghi', 'Gohir.D06G010400' => 'ghi', 'Gohir.D06G111250' => 'ghi', 'Gohir.D06G132000' => 'ghi', 'Gohir.D06G210500' => 'ghi', 'Gohir.D07G165675' => 'ghi', 'Gohir.D08G062240' => 'ghi', 'Gohir.D08G086101' => 'ghi', 'Gohir.D08G138060' => 'ghi', 'Gohir.D09G072300' => 'ghi', 'Gohir.D10G041400' => 'ghi', 'Gohir.D11G191020' => 'ghi', 'Gohir.D11G212066' => 'ghi', 'Gohir.D12G036300' => 'ghi', 'Gohir.D12G168600' => 'ghi', 'Gohir.D13G150600' => 'ghi', 'Gorai.001G057300' => 'gra', 'Gorai.002G069900' => 'gra', 'Gorai.002G200000' => 'gra', 'Gorai.003G067600' => 'gra', 'Gorai.005G074800' => 'gra', 'Gorai.006G087300' => 'gra', 'Gorai.008G037500' => 'gra', 'Gorai.008G181400' => 'gra', 'Gorai.009G169400' => 'gra', 'Gorai.009G387900' => 'gra', 'Gorai.010G013300' => 'gra', 'Gorai.010G153800' => 'gra', 'Gorai.010G255800' => 'gra', 'Gorai.011G043700' => 'gra', 'Gorai.011G198900' => 'gra', 'Gorai.013G168400' => 'gra', 'GSVIVG01005212001' => 'vvi', 'GSVIVG01006163001' => 'vvi', 'GSVIVG01009625001' => 'vvi', 'GSVIVG01014338001' => 'vvi', 'GSVIVG01020005001' => 'vvi', 'GSVIVG01021450001' => 'vvi', 'GSVIVG01023975001' => 'vvi', 'GSVIVG01034490001' => 'vvi', 'HanXRQChr04g0112071' => 'han', 'HanXRQChr05g0131151' => 'han', 'HanXRQChr09g0262371' => 'han', 'HanXRQChr09g0268401' => 'han', 'HanXRQChr10g0279241' => 'han', 'HanXRQChr10g0297961' => 'han', 'HanXRQChr11g0326231' => 'han', 'HanXRQChr11g0328471' => 'han', 'HanXRQChr16g0507941' => 'han', 'HanXRQChr17g0560211' => 'han', 'Haze_02108' => 'cav', 'Haze_02428' => 'cav', 'Haze_05593' => 'cav', 'Haze_06448' => 'cav', 'Haze_09427' => 'cav', 'Haze_12022' => 'cav', 'Haze_17612' => 'cav', 'Haze_17928' => 'cav', 'Hma1.2p1_0032F.1_g019250' => 'hma', 'Hma1.2p1_0163F.1_g072690' => 'hma', 'Hma1.2p1_0265F.1_g106710' => 'hma', 'Hma1.2p1_0286F.1_g113970' => 'hma', 'Hma1.2p1_0363F.1_g136640' => 'hma', 'Hma1.2p1_0584F.1_g183470' => 'hma', 'Hma1.2p1_0885F.1_g232570' => 'hma', 'HPP92_006022' => 'vpl', 'HPP92_007320' => 'vpl', 'HPP92_011521' => 'vpl', 'HPP92_019387' => 'vpl', 'HPP92_024038' => 'vpl', 'Hund05891' => 'sun', 'Hund06450' => 'sun', 'Hund12053' => 'sun', 'Hund16800' => 'sun', 'Hund21222' => 'sun', 'Hund22896' => 'sun', 'Hund23746' => 'sun', 'Hund27083' => 'sun', 'Lalb_Chr02g0141831' => 'lal', 'Lalb_Chr02g0141841' => 'lal', 'Lalb_Chr05g0220411' => 'lal', 'Lalb_Chr06g0162081' => 'lal', 'Lalb_Chr09g0327651' => 'lal', 'Lalb_Chr13g0295051' => 'lal', 'Lalb_Chr15g0086801' => 'lal', 'Lalb_Chr16g0383781' => 'lal', 'Lalb_Chr16g0383791' => 'lal', 'Lalb_Chr18g0055441' => 'lal', 'Lalb_Chr18g0059611' => 'lal', 'Lalb_Chr20g0109661' => 'lal', 'Lalb_Chr20g0109831' => 'lal', 'Lalb_Chr20g0121871' => 'lal', 'Lalb_Chr22g0355361' => 'lal', 'Lalb_Chr25g0286371' => 'lal', 'Lj1A1187G43' => 'lonja', 'Lj1A1205T50' => 'lonja', 'Lj1A800G33' => 'lonja', 'Lj1C1187T7' => 'lonja', 'Lj1C843T11' => 'lonja', 'Lj1g0010940' => 'lja', 'Lj2A288T69' => 'lonja', 'Lj3g0024276' => 'lja', 'Lj4A47T76' => 'lonja', 'Lj4g0005805' => 'lja', 'Lj4g0006097' => 'lja', 'Lj4g0008528' => 'lja', 'Lj4g0024907' => 'lja', 'Lj5g0012472' => 'lja', 'Lj5g0018648' => 'lja', 'Lj6C789G1' => 'lonja', 'Lj6g0004000' => 'lja', 'Lj7A292G67' => 'lonja', 'Lj7A292T64' => 'lonja', 'Lj9A400T58' => 'lonja', 'Lsat_1_v5_gn_1_126181' => 'lsa', 'Lsat_1_v5_gn_4_123041' => 'lsa', 'Lsat_1_v5_gn_4_133620' => 'lsa', 'Lsat_1_v5_gn_4_53221' => 'lsa', 'Lsat_1_v5_gn_4_71961' => 'lsa', 'Lsat_1_v5_gn_7_105241' => 'lsa', 'Lsat_1_v5_gn_7_21361' => 'lsa', 'Lsat_1_v5_gn_7_28860' => 'lsa', 'Lsat_1_v5_gn_7_31260' => 'lsa', 'Lsat_1_v5_gn_8_52801' => 'lsa', 'Manes.02G191400' => 'mes', 'Manes.03G110100' => 'mes', 'Manes.04G071100' => 'mes', 'Manes.05G100500' => 'mes', 'Manes.05G164700' => 'mes', 'Manes.15G087000' => 'mes', 'Manes.15G121500' => 'mes', 'Manes.16G028300' => 'mes', 'Manes.17G046100' => 'mes', 'Manes.17G069800' => 'mes', 'Manes.18G100500' => 'mes', 'Mapoly0002s0109' => 'mpo', 'Mapoly0024s0007' => 'mpo', 'Mapoly0089s0032' => 'mpo', 'MBI04_g42241_MAGBIO' => 'mbi', 'MBI05_g11988_MAGBIO' => 'mbi', 'MBI05_g35452_MAGBIO' => 'mbi', 'MBI07_g30179_MAGBIO' => 'mbi', 'MBI07_g35859_MAGBIO' => 'mbi', 'MBI07_g35860_MAGBIO' => 'mbi', 'MBI07_g37166_MAGBIO' => 'mbi', 'MBI08_g18172_MAGBIO' => 'mbi', 'MBI09_g08441_MAGBIO' => 'mbi', 'MBI13_g01676_MAGBIO' => 'mbi', 'MBI14_g42955_MAGBIO' => 'mbi', 'MBI16_g13161_MAGBIO' => 'mbi', 'MBI17_g27204_MAGBIO' => 'mbi', 'MBI19_g21595_MAGBIO' => 'mbi', 'MD00G1148400' => 'mdo', 'MD02G1301200' => 'mdo', 'MD03G1227800' => 'mdo', 'MD05G1041100' => 'mdo', 'MD05G1124800' => 'mdo', 'MD05G1284000' => 'mdo', 'MD05G1338800' => 'mdo', 'MD05G1338900' => 'mdo', 'MD07G1022800' => 'mdo', 'MD10G1047500' => 'mdo', 'MD10G1127500' => 'mdo', 'MD10G1262300' => 'mdo', 'MD10G1293800' => 'mdo', 'MD16G1074300' => 'mdo', 'Medtr1g021670' => 'mtr', 'Medtr1g096320' => 'mtr', 'Medtr2g013690' => 'mtr', 'Medtr2g019450' => 'mtr', 'Medtr2g085170' => 'mtr', 'Medtr4g088785' => 'mtr', 'Medtr8g055930' => 'mtr', 'Medtr8g085850' => 'mtr', 'MELO3C002605.2' => 'cme', 'MELO3C003891.2' => 'cme', 'MELO3C004012.2' => 'cme', 'MELO3C007134.2' => 'cme', 'MELO3C008118.2' => 'cme', 'MELO3C016700.2' => 'cme', 'MELO3C024127.2' => 'cme', 'MELO3C033361.2' => 'cme', 'MELO3C033362.2' => 'cme', 'Migut.C00430' => 'egut', 'Migut.C01246' => 'egut', 'Migut.E00101' => 'egut', 'Migut.H01486' => 'egut', 'Migut.H01939' => 'egut', 'Migut.K00360' => 'egut', 'Migut.M00910' => 'egut', 'Migut.M01139' => 'egut', 'Migut.N02677' => 'egut', 'MSTRG.13252' => 'ama', 'MSTRG.14701' => 'ama', 'MSTRG.1521' => 'ama', 'MSTRG.15884' => 'ama', 'MSTRG.16242' => 'ama', 'MSTRG.22285' => 'ama', 'MSTRG.22444' => 'ama', 'MSTRG.2349' => 'ama', 'MSTRG.26308' => 'ama', 'MSTRG.28296' => 'ama', 'MSTRG.9895' => 'ama', 'Nitab4.5_0000110g0060' => 'nta', 'Nitab4.5_0000420g0130' => 'nta', 'Nitab4.5_0000422g0030' => 'nta', 'Nitab4.5_0000560g0180' => 'nta', 'Nitab4.5_0000703g0100' => 'nta', 'Nitab4.5_0000786g0200' => 'nta', 'Nitab4.5_0001336g0020' => 'nta', 'Nitab4.5_0001796g0030' => 'nta', 'Nitab4.5_0003348g0060' => 'nta', 'Nitab4.5_0003698g0040' => 'nta', 'Nitab4.5_0003942g0090' => 'nta', 'Nitab4.5_0004775g0070' => 'nta', 'Nitab4.5_0004864g0030' => 'nta', 'Nitab4.5_0005615g0020' => 'nta', 'Nitab4.5_0009288g0030' => 'nta', 'Nitab4.5_0009341g0010' => 'nta', 'Nitab4.5_0009535g0010' => 'nta', 'Nn1g03995' => 'nnu', 'Nn1g04100' => 'nnu', 'Nn1g06530' => 'nnu', 'Nn3g16404' => 'nnu', 'Nn3g17212' => 'nnu', 'Nn3g20776' => 'nnu', 'Nn3g21923' => 'nnu', 'Nn5g27737' => 'nnu', 'Nn5g29461' => 'nnu', 'Nn7g38355' => 'nnu', 'Nn8g39873' => 'nnu', 'Oeu000548.2' => 'oeu', 'Oeu004672.1' => 'oeu', 'Oeu015605.2' => 'oeu', 'Oeu016092.1' => 'oeu', 'Oeu017879.3' => 'oeu', 'Oeu024910.1' => 'oeu', 'Oeu028965.1' => 'oeu', 'Oeu031269.1' => 'oeu', 'Oeu031270.1' => 'oeu', 'Oeu032535.1' => 'oeu', 'Oeu034151.1' => 'oeu', 'Oeu034152.1' => 'oeu', 'Oeu034588.2' => 'oeu', 'Oeu050846.1' => 'oeu', 'Oeu050849.2' => 'oeu', 'Oeu051063.2' => 'oeu', 'Oeu052368.1' => 'oeu', 'Oeu052370.1' => 'oeu', 'Os01g0210400' => 'osa', 'Os01g0304300' => 'osa', 'Os01g0749100' => 'osa', 'Os02g0745800' => 'osa', 'Os03g0769050' => 'osa', 'Os05g0531500' => 'osa', 'Os06g0724300' => 'osa', 'Os11g0198100' => 'osa', 'Peaxi162Scf00069g01425' => 'pax', 'Peaxi162Scf00280g00811' => 'pax', 'Peaxi162Scf00310g00615' => 'pax', 'Peaxi162Scf00362g00542' => 'pax', 'Peaxi162Scf00461g00310' => 'pax', 'Peaxi162Scf00530g00118' => 'pax', 'Peaxi162Scf00541g00057' => 'pax', 'Peaxi162Scf00661g00017' => 'pax', 'Peaxi162Scf00926g00027' => 'pax', 'Peaxi162Scf01064g00263' => 'pax', 'Peaxi162Scf01211g00135' => 'pax', 'PGR004G2336' => 'pgr', 'PGR042G0327' => 'pgr', 'PGR042G1957' => 'pgr', 'PGR042G2003' => 'pgr', 'PGR042G3929' => 'pgr', 'PGR083G1137' => 'pgr', 'PGR083G1364' => 'pgr', 'PGSC0003DMG400003381' => 'stu', 'PGSC0003DMG400003417' => 'stu', 'PGSC0003DMG400008981' => 'stu', 'PGSC0003DMG400012417' => 'stu', 'PGSC0003DMG400012823' => 'stu', 'PGSC0003DMG400016885' => 'stu', 'PGSC0003DMG400022812' => 'stu', 'PGSC0003DMG400029726' => 'stu', 'PGSC0003DMG401009243' => 'stu', 'PGSC0003DMG401031505' => 'stu', 'PGSC0003DMG402031505' => 'stu', 'Phvul.001G017600' => 'pvu', 'Phvul.002G193500' => 'pvu', 'Phvul.002G228900' => 'pvu', 'Phvul.002G236800' => 'pvu', 'Phvul.003G049500' => 'pvu', 'Phvul.005G072000' => 'pvu', 'Phvul.006G164800' => 'pvu', 'Phvul.006G185100' => 'pvu', 'Phvul.007G090000' => 'pvu', 'Potri.001G399800' => 'ptr', 'Potri.002G149900' => 'ptr', 'Potri.004G044100' => 'ptr', 'Potri.004G177600' => 'ptr', 'Potri.009G138000' => 'ptr', 'Potri.010G094000' => 'ptr', 'Potri.011G053000' => 'ptr', 'Potri.011G119300' => 'ptr', 'Potri.013G113700' => 'ptr', 'Potri.018G107800' => 'ptr', 'Potri.019G084100' => 'ptr', 'Pp3c14_23720' => 'ppa', 'Pp3c16_6340' => 'ppa', 'Pp3c23_13420' => 'ppa', 'Pp3c24_2740' => 'ppa', 'Pp3c25_860' => 'ppa', 'Pp3c8_21750' => 'ppa', 'Prupe.1G273000' => 'ppe', 'Prupe.1G273700' => 'ppe', 'Prupe.1G274100' => 'ppe', 'Prupe.2G023300' => 'ppe', 'Prupe.4G048000' => 'ppe', 'Prupe.4G080400' => 'ppe', 'Prupe.4G181200' => 'ppe', 'Prupe.8G056900' => 'ppe', 'Prupe.8G168700' => 'ppe', 'Psat1g189080' => 'psa', 'Psat1g204760' => 'psa', 'Psat4g175560' => 'psa', 'Psat4g177720' => 'psa', 'Psat5g244240' => 'psa', 'Psat6g010720' => 'psa', 'Psat6g187200' => 'psa', 'Psat7g072040' => 'psa', 'PSO017G3501' => 'pso', 'PSO063G2148' => 'pso', 'PSO063G5608' => 'pso', 'PSO210G6392' => 'pso', 'PSO541G2319' => 'pso', 'PSO541G2836' => 'pso', 'PSO541G4012' => 'pso', 'PSO541G6253' => 'pso', 'PSO675G0580' => 'pso', 'PSO675G0856' => 'pso', 'PSO675G5635' => 'pso', 'PSO675G9157' => 'pso', 'PSO832G1660' => 'pso', 'PSO832G1969' => 'pso', 'QL02p007186' => 'qlo', 'QL02p033904' => 'qlo', 'QL03p064391' => 'qlo', 'QL05p040593' => 'qlo', 'QL05p058242' => 'qlo', 'QL08p021825' => 'qlo', 'QL11p004981' => 'qlo', 'RcHm_v2.0_Chr1g0318301' => 'rch', 'RcHm_v2.0_Chr4g0418501' => 'rch', 'RcHm_v2.0_Chr4g0439971' => 'rch', 'RcHm_v2.0_Chr5g0008541' => 'rch', 'RcHm_v2.0_Chr5g0014101' => 'rch', 'RcHm_v2.0_Chr5g0014131' => 'rch', 'RcHm_v2.0_Chr5g0033621' => 'rch', 'RcHm_v2.0_Chr6g0272041' => 'rch', 'RcHm_v2.0_Chr6g0278831' => 'rch', 'Rhsim02G0130400' => 'rsi', 'Rhsim02G0171100' => 'rsi', 'Rhsim05G0053000' => 'rsi', 'Rhsim05G0053100' => 'rsi', 'Rhsim06G0096500' => 'rsi', 'Rhsim06G0096600' => 'rsi', 'Rhsim06G0199100' => 'rsi', 'Rhsim12G0062300' => 'rsi', 'Rhsim12G0062800' => 'rsi', 'Sabra02G0118600' => 'sbr', 'Sabra04G0027300' => 'sbr', 'Sabra04G0119500' => 'sbr', 'Sabra08G0112500' => 'sbr', 'Sabra11G0036800' => 'sbr', 'Sabra11G0103800' => 'sbr', 'Sabra13G0096300' => 'sbr', 'Sabra16G0262300' => 'sbr', 'Sabra18G0091700' => 'sbr', 'Sabra19G0095400' => 'sbr', 'SalBow6G3080' => 'sbo', 'SalBow7G1157' => 'sbo', 'SalBow7G2123' => 'sbo', 'SalBow7G2285' => 'sbo', 'SalBow7G3537' => 'sbo', 'SalBow8G2947' => 'sbo', 'SalBow8G4463' => 'sbo', 'SalBow8G5466' => 'sbo', 'Sc01g0001750' => 'sci', 'Sc02g0006640' => 'sci', 'Sc02g0006670' => 'sci', 'Sc04g0008220' => 'sci', 'Sc05g0006190' => 'sci', 'Sc08g0002760' => 'sci', 'Sc17g0006170' => 'sci', 'Sc22g0002050' => 'sci', 'Sc23g0001190' => 'sci', 'Sc24g0000980' => 'sci', 'Sed0006245' => 'sed', 'Sed0007543' => 'sed', 'Sed0009411' => 'sed', 'Sed0010765' => 'sed', 'Sed0012944' => 'sed', 'Sed0014682' => 'sed', 'Sed0016174' => 'sed', 'Sed0016796' => 'sed', 'Sed0020317' => 'sed', 'Sed0021467' => 'sed', 'SEGI_01316' => 'sgi', 'SEGI_03374' => 'sgi', 'SEGI_16265' => 'sgi', 'SEGI_18569' => 'sgi', 'SEGI_20351' => 'sgi', 'SEGI_26395' => 'sgi', 'SEGI_29469' => 'sgi', 'SEGI_34771' => 'sgi', 'SEGI_36769' => 'sgi', 'SEGI_37139' => 'sgi', 'SGA_v2.0_scaffold100G29687' => 'sas', 'SGA_v2.0_scaffold118G32472' => 'sas', 'SGA_v2.0_scaffold14G07051' => 'sas', 'SGA_v2.0_scaffold183G39845' => 'sas', 'SGA_v2.0_scaffold1G00174' => 'sas', 'SGA_v2.0_scaffold22G09714' => 'sas', 'SGA_v2.0_scaffold333G48992' => 'sas', 'SGA_v2.0_scaffold46G17491' => 'sas', 'SGA_v2.0_scaffold49G18294' => 'sas', 'SGA_v2.0_scaffold63G21658' => 'sas', 'SHI01741' => 'shi', 'SHI05771' => 'shi', 'SHI18077' => 'shi', 'SHI20525' => 'shi', 'SHI20527' => 'shi', 'SHI20528' => 'shi', 'SMO172G0185' => 'smo', 'SMO198G0020' => 'smo', 'SMO351G0006' => 'smo', 'SMO356G0118' => 'smo', 'SMO358G0296' => 'smo', 'SMO367G0079' => 'smo', 'SMO367G1277' => 'smo', 'Solyc01g014220.3' => 'sly', 'Solyc01g111770.2' => 'sly', 'Solyc02g078180.3' => 'sly', 'Solyc03g006430.3' => 'sly', 'Solyc03g006456.1' => 'sly', 'Solyc03g079860.2' => 'sly', 'Solyc04g079770.3' => 'sly', 'Solyc05g007430.4' => 'sly', 'Solyc07g063150.3' => 'sly', 'Solyc08g016620.3' => 'sly', 'Solyc09g057590.3' => 'sly', 'Solyc09g057600.1' => 'sly', 'Solyc10g009050.3' => 'sly', 'Solyc11g017420.2' => 'sly', 'Sopen01g053810' => 'spe', 'Sopen02g023040' => 'spe', 'Sopen03g002440' => 'spe', 'Sopen04g033350' => 'spe', 'Sopen05g003310' => 'spe', 'Sopen07g004050' => 'spe', 'Sopen07g031340' => 'spe', 'Sopen08g006990' => 'spe', 'Sopen10g004830' => 'spe', 'Sopen11g009370' => 'spe', 'Sp1g24450' => 'spa', 'Sp1g29670' => 'spa', 'Sp1g39600' => 'spa', 'Sp2g11080' => 'spa', 'Sp2g13970' => 'spa', 'Sp4g16130' => 'spa', 'Sp6g13080' => 'spa', 'Sp7g37270' => 'spa', 'TAR371G0065' => 'tar', 'TAR376G0340' => 'tar', 'TAR376G0435' => 'tar', 'TAR381G0002' => 'tar', 'TAR381G1236' => 'tar', 'TAR624G0055' => 'tar', 'TAR624G0324' => 'tar', 'TAR624G0696' => 'tar', 'TAR624G0906' => 'tar', 'TAR625G0107' => 'tar', 'TAR626G0015' => 'tar', 'TAR626G1356' => 'tar', 'TAR627G0888' => 'tar', 'TAR628G0399' => 'tar', 'TAR628G1327' => 'tar', 'TAR629G2831' => 'tar', 'TAR629G2874' => 'tar', 'TAR633G1432' => 'tar', 'TAR633G2771' => 'tar', 'THA.LOC104803394' => 'tha', 'THA.LOC104805153' => 'tha', 'THA.LOC104806784' => 'tha', 'THA.LOC104810473' => 'tha', 'THA.LOC104813100' => 'tha', 'THA.LOC104814215' => 'tha', 'THA.LOC104815554' => 'tha', 'THA.LOC104820544' => 'tha', 'THA.LOC104824754' => 'tha', 'THA.LOC104827717' => 'tha', 'Thecc.02G031400' => 'tca', 'Thecc.02G055900' => 'tca', 'Thecc.02G350800' => 'tca', 'Thecc.06G150900' => 'tca', 'Thecc.06G186600' => 'tca', 'Thecc.07G089600' => 'tca', 'Thecc.08G020400' => 'tca', 'Thecc.08G182100' => 'tca', 'Thhalv10000873m.g' => 'esa', 'Thhalv10004185m.g' => 'esa', 'Thhalv10006981m.g' => 'esa', 'Thhalv10007204m.g' => 'esa', 'Thhalv10011374m.g' => 'esa', 'Thhalv10013482m.g' => 'esa', 'Thhalv10017801m.g' => 'esa', 'Thhalv10024983m.g' => 'esa', 'TPR.G12072' => 'tpr', 'TPR.G15769' => 'tpr', 'TPR.G16504' => 'tpr', 'TPR.G16506' => 'tpr', 'TPR.G24345' => 'tpr', 'TPR.G26666' => 'tpr', 'TPR.G27320' => 'tpr', 'TPR.G31819' => 'tpr', 'TPR.G38879' => 'tpr', 'TPR.G39015' => 'tpr', 'TPR.G8819' => 'tpr', 'TWI09G0924' => 'twi', 'TWI12G0811' => 'twi', 'TWI12G1294' => 'twi', 'TWI31G0150' => 'twi', 'TWI36G1262' => 'twi', 'TWI38G1287' => 'twi', 'TWI38G1633' => 'twi', 'TWI38G1982' => 'twi', 'TWI39G0116' => 'twi', 'TWI60G1011' => 'twi', 'TWI63G0171' => 'twi', 'TWI73G0839' => 'twi', 'TWI79G1511' => 'twi', 'unitig_0.g915' => 'ugi', 'unitig_0.g916' => 'ugi', 'unitig_21.g20219' => 'ugi', 'unitig_21.g20416' => 'ugi', 'unitig_578.g16132' => 'ugi', 'unitig_578.g16718' => 'ugi', 'unitig_62.g23481' => 'ugi', 'unitig_744.g24535' => 'ugi', 'unitig_749.g13525' => 'ugi', 'vmacro01248' => 'vma', 'vmacro02290' => 'vma', 'vmacro10946' => 'vma', 'vmacro11865' => 'vma', 'vmacro12493' => 'vma', 'vmacro17322' => 'vma', 'vmacro21599' => 'vma', 'vmacro23041' => 'vma', 'VMungo0251G0004' => 'vmu', 'VMungo0251G2639' => 'vmu', 'VMungo0251G2967' => 'vmu', 'VMungo0540G0864' => 'vmu', 'VMungo0540G1569' => 'vmu', 'VMungo0647G0317' => 'vmu', 'VMungo0720G1373' => 'vmu', 'VMungo0720G1508' => 'vmu', 'VMungo1080G0485' => 'vmu', 'VMungo1215G3177' => 'vmu', 'Zm00001eb112600' => 'zma', 'Zm00001eb120220' => 'zma', 'Zm00001eb153240' => 'zma', 'Zm00001eb168880' => 'zma', 'Zm00001eb213920' => 'zma', 'Zm00001eb228280' => 'zma', 'Zm00001eb254580' => 'zma', 'Zm00001eb272180' => 'zma', 'Zm00001eb293190' => 'zma', 'Zm00001eb322930' => 'zma', 'Zm00001eb353360' => 'zma', 'Zm00001eb353390' => 'zma', 'Zm00001eb353430' => 'zma', 'Zm00001eb353440' => 'zma', 'Zm00001eb353780' => 'zma' ) $gf_id = 'HOM05D000499' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000499' ) $data_identifier = 'HOM05D000499' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 29, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 12, 'amhyb' => (int) 8, 'aly' => (int) 12, 'aox' => (int) 9, 'arhy' => (int) 26, 'ath' => (int) 8, 'atr' => (int) 7, 'acertr' => (int) 10, 'cqu' => (int) 15, 'bca' => (int) 29, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 11, 'cansat' => (int) 8, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 9, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 8, 'cpa' => (int) 10, 'csa' => (int) 7, 'camsi' => (int) 20, 'dca' => (int) 8, 'din' => (int) 12, 'dzi' => (int) 14, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 6, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 38, 'gra' => (int) 16, 'vvi' => (int) 8, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 5, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 11, 'lja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 11, 'mpo' => (int) 3, 'mbi' => (int) 14, 'mdo' => (int) 14, 'mtr' => (int) 8, 'cme' => (int) 9, 'egut' => (int) 9, 'ama' => (int) 11, 'nta' => (int) 17, 'nnu' => (int) 11, 'oeu' => (int) 18, 'osa' => (int) 8, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 6, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 9, 'rsi' => (int) 9, 'sbr' => (int) 10, 'sbo' => (int) 8, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 10, 'sas' => (int) 10, 'shi' => (int) 6, 'smo' => (int) 7, 'sly' => (int) 14, 'spe' => (int) 10, 'spa' => (int) 8, 'tar' => (int) 19, 'tha' => (int) 10, 'tca' => (int) 8, 'esa' => (int) 8, 'tpr' => (int) 11, 'twi' => (int) 13, 'ugi' => (int) 9, 'vma' => (int) 8, 'vmu' => (int) 10, 'zma' => (int) 15 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb353780' $species_info = array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ) $local_species = 'cru' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000499', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1066', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p29780' => 'bna', 'A02p33180' => 'bna', 'A03p16470' => 'bna', 'A03p66010' => 'bna', 'A04p25970' => 'bna', 'A06p01270' => 'bna', 'A06p46080' => 'bna', 'A07p11400' => 'bna', 'A08p01840' => 'bna', 'A08p08230' => 'bna', 'A08p25740' => 'bna', 'A09p32070' => 'bna', 'A09p37830' => 'bna', 'A09p42840' => 'bna', 'A09p42850' => 'bna', 'Aa31LG10G2060' => 'aar', 'Aa31LG2G7410' => 'aar', 'Aa31LG6G10200' => 'aar', 'Aa31LG6G16680' => 'aar', 'Aa31LG6G8470' => 'aar', 'Aa31LG9G12730' => 'aar', 'Aa31LG9G13680' => 'aar', 'Aa31LG9G14920' => 'aar', 'Aa31LG9G6650' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4977' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5467' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3254' => 'aag', 'Actinidia02578' => 'ach', 'Actinidia07693' => 'ach', 'Actinidia08413' => 'ach', 'Actinidia08414' => 'ach', 'Actinidia15289' => 'ach', 'Actinidia19871' => 'ach', 'Actinidia21475' => 'ach', 'Actinidia22576' => 'ach', 'Actinidia28327' => 'ach', 'Actinidia32491' => 'ach', 'Actinidia39463' => 'ach', 'Actinidia39571' => 'ach', 'Ah.01g013750' => 'amhyb', 'Ah.01g023210' => 'amhyb', 'Ah.04g164850' => 'amhyb', 'Ah.05g178060' => 'amhyb', 'Ah.07g204270' => 'amhyb', 'Ah.07g208480' => 'amhyb', 'Ah.09g237410' => 'amhyb', 'Ah.14g089460' => 'amhyb', 'AL1G41790' => 'aly', 'AL1G49050' => 'aly', 'AL1G53810' => 'aly', 'AL1G61400' => 'aly', 'AL4G18580' => 'aly', 'AL5G12510' => 'aly', 'AL5G12540' => 'aly', 'AL6G43230' => 'aly', 'AL7G10370' => 'aly', 'AL7G19250' => 'aly', 'AL8G12240' => 'aly', 'AL8G18540' => 'aly', 'Aqoxy1G02409' => 'aox', 'Aqoxy2G03993' => 'aox', 'Aqoxy3G03357' => 'aox', 'Aqoxy4G00785' => 'aox', 'Aqoxy5G02598' => 'aox', 'Aqoxy6G00132' => 'aox', 'Aqoxy7G01776' => 'aox', 'Aqoxy7G02316' => 'aox', 'Aqoxy7G03973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.12AFKW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B8730' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27IQR1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3F75VG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3RE0GA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41TCQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.527VTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FIR39' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5W8UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DA38EV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ63HS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H1I32C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HC27T5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4M8AP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7N3CZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9UVDZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LS1NQA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT1D4B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SKC4TM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCFV76' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF9Q1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQWD9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1ZM88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WE07RT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YCK7VH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJE6Q6' => 'arhy', 'AT1G28240' => 'ath', 'AT1G34550' => 'ath', 'AT1G53040' => 'ath', 'AT2G02910' => 'ath', 'AT4G09630' => 'ath', 'AT4G38500' => 'ath', 'AT5G42660' => 'ath', 'AT5G46220' => 'ath', 'ATR0152G026' => 'atr', 'ATR0564G343' => 'atr', 'ATR0706G151' => 'atr', 'ATR0733G207' => 'atr', 'ATR0751G234' => 'atr', 'ATR0807G048' => 'atr', 'ATR1091G084' => 'atr', 'Atru.chr10.1229' => 'acertr', 'Atru.chr10.1230' => 'acertr', 'Atru.chr10.1874' => 'acertr', 'Atru.chr11.1808' => 'acertr', 'Atru.chr13.1795' => 'acertr', 'Atru.chr13.570' => 'acertr', 'Atru.chr2.2608' => 'acertr', 'Atru.chr2.2609' => 'acertr', 'Atru.chr5.3428' => 'acertr', 'Atru.chr8.1171' => 'acertr', 'AUR62004651' => 'cqu', 'AUR62008675' => 'cqu', 'AUR62010014' => 'cqu', 'AUR62013004' => 'cqu', 'AUR62014825' => 'cqu', 'AUR62015015' => 'cqu', 'AUR62015151' => 'cqu', 'AUR62017020' => 'cqu', 'AUR62019422' => 'cqu', 'AUR62023570' => 'cqu', 'AUR62025571' => 'cqu', 'AUR62029098' => 'cqu', 'AUR62033863' => 'cqu', 'AUR62034296' => 'cqu', 'AUR62040075' => 'cqu', 'BcaB02g07334' => 'bca', 'BcaB02g10575' => 'bca', 'BcaB03g12119' => 'bca', 'BcaB03g12120' => 'bca', 'BcaB03g13945' => 'bca', 'BcaB04g17123' => 'bca', 'BcaB04g17867' => 'bca', 'BcaB04g19839' => 'bca', 'BcaB07g30317' => 'bca', 'BcaB07g32432' => 'bca', 'BcaB07g33362' => 'bca', 'BcaB08g36611' => 'bca', 'BcaC01g00028' => 'bca', 'BcaC01g01356' => 'bca', 'BcaC01g02034' => 'bca', 'BcaC01g06051' => 'bca', 'BcaC03g16839' => 'bca', 'BcaC03g17176' => 'bca', 'BcaC05g26829' => 'bca', 'BcaC06g31490' => 'bca', 'BcaC06g35344' => 'bca', 'BcaC06g36570' => 'bca', 'BcaC07g37537' => 'bca', 'BcaC08g43491' => 'bca', 'BcaC08g43773' => 'bca', 'BcaNung00234' => 'bca', 'BcaNung01982' => 'bca', 'BcaNung03707' => 'bca', 'BcaNung06454' => 'bca', 'BolC2t10762H' => 'bol', 'BolC2t11191H' => 'bol', 'BolC3t14322H' => 'bol', 'BolC3t19747H' => 'bol', 'BolC3t21425H' => 'bol', 'BolC4t27800H' => 'bol', 'BolC5t31423H' => 'bol', 'BolC6t35951H' => 'bol', 'BolC6t36282H' => 'bol', 'BolC7t40678H' => 'bol', 'BolC7t40679H' => 'bol', 'BolC7t42222H' => 'bol', 'BolC7t43492H' => 'bol', 'BolC7t46785H' => 'bol', 'BolC8t47853H' => 'bol', 'BolC9t56805H' => 'bol', 'BraA02t08000Z' => 'bra', 'BraA02t08341Z' => 'bra', 'BraA03t10936Z' => 'bra', 'BraA03t15657Z' => 'bra', 'BraA04t18100Z' => 'bra', 'BraA05t20523Z' => 'bra', 'BraA06t23353Z' => 'bra', 'BraA06t27473Z' => 'bra', 'BraA06t27769Z' => 'bra', 'BraA07t28928Z' => 'bra', 'BraA08t32236Z' => 'bra', 'BraA08t32841Z' => 'bra', 'BraA08t34524Z' => 'bra', 'BraA09t38742Z' => 'bra', 'BraA09t39295Z' => 'bra', 'C02p47180' => 'bna', 'C02p50990' => 'bna', 'C03p19360' => 'bna', 'C03p74950' => 'bna', 'C03p91000' => 'bna', 'C04p63260' => 'bna', 'C05p27050' => 'bna', 'C06p08750' => 'bna', 'C06p11490' => 'bna', 'C07p02820' => 'bna', 'C07p17180' => 'bna', 'C07p29440' => 'bna', 'C07p63730' => 'bna', 'C09p39260' => 'bna', 'CAN.G1164.34' => 'can', 'CAN.G1164.39' => 'can', 'CAN.G1530.3' => 'can', 'CAN.G162.61' => 'can', 'CAN.G176.6' => 'can', 'CAN.G289.49' => 'can', 'CAN.G370.21' => 'can', 'CAN.G370.22' => 'can', 'CAN.G371.117' => 'can', 'CAN.G58.37' => 'can', 'CAN.G588.98' => 'can', 'CANSAT21G2266' => 'cansat', 'CANSAT25G2799' => 'cansat', 'CANSAT35G0862' => 'cansat', 'CANSAT35G1704' => 'cansat', 'CANSAT35G1760' => 'cansat', 'CANSAT56G3971' => 'cansat', 'CANSAT56G4116' => 'cansat', 'CANSAT80G1259' => 'cansat', 'CARHR027730' => 'chi', 'CARHR033880' => 'chi', 'CARHR043270' => 'chi', 'CARHR145330' => 'chi', 'CARHR145340' => 'chi', 'CARHR175570' => 'chi', 'CARHR181570' => 'chi', 'CARHR258470' => 'chi', 'CARHR260490' => 'chi', 'CARHR294220' => 'chi', 'Carub.0001s2668' => 'cru', 'Carub.0001s3257' => 'cru', 'Carub.0001s4220' => 'cru', 'Carub.0005s0179' => 'cru', 'Carub.0006s2807' => 'cru', 'Carub.0007s0039' => 'cru', 'Carub.0008s0169' => 'cru', 'Carub.0008s0636' => 'cru', 'Ca_00338_v3' => 'car', 'Ca_00542_v3' => 'car', 'Ca_01844_v3' => 'car', 'Ca_10611_v3' => 'car', 'Ca_13326_v3' => 'car', 'Ca_17944_v3' => 'car', 'Ca_18546_v3' => 'car', 'Ca_24219_v3' => 'car', 'Ca_29972_v3' => 'car', 'CBR_g3681' => 'cbr', 'CBR_g40021' => 'cbr', 'Cc01_g08140' => 'ccan', 'Cc02_g13410' => 'ccan', 'Cc02_g37480' => 'ccan', 'Cc05_g12030' => 'ccan', 'Cc09_g03370' => 'ccan', 'Cc09_g10300' => 'ccan', 'Cc10_g03530' => 'ccan', 'Cc10_g11380' => 'ccan', 'CDE01G0176' => 'cde', 'CDE02G0675' => 'cde', 'CDE02G0942' => 'cde', 'CDE02G1153' => 'cde', 'CDE02G4177' => 'cde', 'CDE04G2117' => 'cde', 'CDE04G2736' => 'cde', 'CDE08G1161' => 'cde', 'CDE09G1238' => 'cde', 'Cfa000467' => 'cfa', 'Cfa000947' => 'cfa', 'Cfa004969' => 'cfa', 'Cfa005284' => 'cfa', 'Cfa008993' => 'cfa', 'Cfa018187' => 'cfa', 'Cfa018454' => 'cfa', 'Cfa020585' => 'cfa', 'Ciclev10000424m.g' => 'ccl', 'Ciclev10003605m.g' => 'ccl', 'Ciclev10007828m.g' => 'ccl', 'Ciclev10014620m.g' => 'ccl', 'Ciclev10015169m.g' => 'ccl', 'Ciclev10018291m.g' => 'ccl', 'Ciclev10028256m.g' => 'ccl', 'Ciclev10033822m.g' => 'ccl', 'CiPaw.05G060300' => 'cil', 'CiPaw.05G085000' => 'cil', 'CiPaw.06G083700' => 'cil', 'CiPaw.06G120300' => 'cil', 'CiPaw.09G060500' => 'cil', 'CiPaw.09G123800' => 'cil', 'CiPaw.11G169700' => 'cil', 'CiPaw.12G118300' => 'cil', 'CiPaw.15G071000' => 'cil', 'CiPaw.15G081900' => 'cil', 'ClCG01G024610' => 'cla', 'ClCG03G006070' => 'cla', 'ClCG05G019250' => 'cla', 'ClCG09G009500' => 'cla', 'ClCG11G008200' => 'cla', 'ClCG11G018080' => 'cla', 'COL.COLO4_17373' => 'col', 'COL.COLO4_22994' => 'col', 'COL.COLO4_26389' => 'col', 'COL.COLO4_27170' => 'col', 'COL.COLO4_31074' => 'col', 'COL.COLO4_31465' => 'col', 'COL.COLO4_36438' => 'col', 'COL.COLO4_36439' => 'col', 'Cpa.g.c38781' => 'cpa', 'Cpa.g.sc128.12' => 'cpa', 'Cpa.g.sc166.7' => 'cpa', 'Cpa.g.sc166.8' => 'cpa', 'Cpa.g.sc20.111' => 'cpa', 'Cpa.g.sc27.31' => 'cpa', 'Cpa.g.sc64.36' => 'cpa', 'Cpa.g.sc64.37' => 'cpa', 'Cpa.g.sc66.49' => 'cpa', 'Cpa.g.sc80.64' => 'cpa', 'CsaV3_1G012320' => 'csa', 'CsaV3_2G008480' => 'csa', 'CsaV3_2G033450' => 'csa', 'CsaV3_3G044830' => 'csa', 'CsaV3_4G033710' => 'csa', 'CsaV3_6G051730' => 'csa', 'CsaV3_7G025350' => 'csa', 'CSS0001067' => 'camsi', 'CSS0005996' => 'camsi', 'CSS0006590' => 'camsi', 'CSS0009673' => 'camsi', 'CSS0010201' => 'camsi', 'CSS0010549' => 'camsi', 'CSS0011364' => 'camsi', 'CSS0014473' => 'camsi', 'CSS0014961' => 'camsi', 'CSS0020191' => 'camsi', 'CSS0021165' => 'camsi', 'CSS0022306' => 'camsi', 'CSS0030591' => 'camsi', 'CSS0030696' => 'camsi', 'CSS0032653' => 'camsi', 'CSS0037487' => 'camsi', 'CSS0041102' => 'camsi', 'CSS0041261' => 'camsi', 'CSS0046246' => 'camsi', 'CSS0049256' => 'camsi', 'DCAR_004075' => 'dca', 'DCAR_011538' => 'dca', 'DCAR_019553' => 'dca', 'DCAR_020952' => 'dca', 'DCAR_021739' => 'dca', 'DCAR_027407' => 'dca', 'DCAR_027913' => 'dca', 'DCAR_028066' => 'dca', 'Dinv05899' => 'din', 'Dinv07563' => 'din', 'Dinv08010' => 'din', 'Dinv14125' => 'din', 'Dinv20172' => 'din', 'Dinv30743' => 'din', 'Dinv31229' => 'din', 'Dinv34162' => 'din', 'Dinv36028' => 'din', 'Dinv39368' => 'din', 'Dinv40565' => 'din', 'Dinv41706' => 'din', 'Duzib052G0089' => 'dzi', 'Duzib116G0641' => 'dzi', 'Duzib132G0069' => 'dzi', 'Duzib132G1219' => 'dzi', 'Duzib147G0278' => 'dzi', 'Duzib160G0480' => 'dzi', 'Duzib170G0661' => 'dzi', 'Duzib177G0591' => 'dzi', 'Duzib187G1353' => 'dzi', 'Duzib192G0858' => 'dzi', 'Duzib192G0883' => 'dzi', 'Duzib213G0506' => 'dzi', 'Duzib235G0289' => 'dzi', 'Duzib251G0422' => 'dzi', 'ECA232G3898' => 'eca', 'ECA233G5950' => 'eca', 'ECA234G1699' => 'eca', 'ECA234G2421' => 'eca', 'ECA236G0426' => 'eca', 'ECA236G4331' => 'eca', 'ECA248G2573' => 'eca', 'EL10Ac1g00077' => 'bvu', 'EL10Ac1g01746' => 'bvu', 'EL10Ac2g03464' => 'bvu', 'EL10Ac4g08176' => 'bvu', 'EL10Ac7g17521' => 'bvu', 'EL10Ac8g20386' => 'bvu', 'EL10Ac9g21343' => 'bvu', 'EL10Ac9g22688' => 'bvu', 'Eucgr.B03434' => 'egr', 'Eucgr.D00618' => 'egr', 'Eucgr.E02395' => 'egr', 'Eucgr.F01129' => 'egr', 'Eucgr.F02622' => 'egr', 'Eucgr.F04207' => 'egr', 'FAN01G0570' => 'fan', 'FAN03G3351' => 'fan', 'FAN06G3702' => 'fan', 'FAN07G2149' => 'fan', 'FAN10G3758' => 'fan', 'FAN11G1170' => 'fan', 'FAN11G2050' => 'fan', 'FAN11G2724' => 'fan', 'FAN12G1700' => 'fan', 'FAN12G2028' => 'fan', 'FAN15G1160' => 'fan', 'FAN15G3063' => 'fan', 'FAN16G2540' => 'fan', 'FAN16G3077' => 'fan', 'FAN16G3624' => 'fan', 'FAN17G0221' => 'fan', 'FAN20G2492' => 'fan', 'FAN20G2905' => 'fan', 'FAN21G0548' => 'fan', 'FAN21G1300' => 'fan', 'FAN22G0077' => 'fan', 'FAN22G1315' => 'fan', 'FAN24G1280' => 'fan', 'FAN24G1445' => 'fan', 'FAN24G3527' => 'fan', 'FAN25G0464' => 'fan', 'FAN25G2885' => 'fan', 'FAN25G3270' => 'fan', 'FAN27G1101' => 'fan', 'FAN27G2846' => 'fan', 'FAN27G3524' => 'fan', 'FvH4_2g11770' => 'fve', 'FvH4_2g15630' => 'fve', 'FvH4_3g05570' => 'fve', 'FvH4_3g09110' => 'fve', 'FvH4_3g19940' => 'fve', 'FvH4_4g04821' => 'fve', 'FvH4_4g31480' => 'fve', 'FvH4_7g01740' => 'fve', 'Glyma.05G130400' => 'gma', 'Glyma.05G156400' => 'gma', 'Glyma.07G197000' => 'gma', 'Glyma.08G085151' => 'gma', 'Glyma.08G114500' => 'gma', 'Glyma.08G300400' => 'gma', 'Glyma.10G215800' => 'gma', 'Glyma.12G224400' => 'gma', 'Glyma.13G179300' => 'gma', 'Glyma.13G218151' => 'gma', 'Glyma.13G238800' => 'gma', 'Glyma.13G276900' => 'gma', 'Glyma.14G078200' => 'gma', 'Glyma.15G074500' => 'gma', 'Glyma.15G094100' => 'gma', 'Glyma.17G247200' => 'gma', 'Glyma.18G120100' => 'gma', 'Glyma.20G176000' => 'gma', 'Gohir.A01G063600' => 'ghi', 'Gohir.A01G170301' => 'ghi', 'Gohir.A02G060500' => 'ghi', 'Gohir.A05G133850' => 'ghi', 'Gohir.A05G161400' => 'ghi', 'Gohir.A06G012900' => 'ghi', 'Gohir.A06G035901' => 'ghi', 'Gohir.A06G127100' => 'ghi', 'Gohir.A06G210500' => 'ghi', 'Gohir.A08G008650' => 'ghi', 'Gohir.A09G072700' => 'ghi', 'Gohir.A09G088301' => 'ghi', 'Gohir.A10G040600' => 'ghi', 'Gohir.A12G036300' => 'ghi', 'Gohir.A12G143350' => 'ghi', 'Gohir.A12G165500' => 'ghi', 'Gohir.A13G145700' => 'ghi', 'Gohir.D01G050000' => 'ghi', 'Gohir.D01G051366' => 'ghi', 'Gohir.D01G161350' => 'ghi', 'Gohir.D02G065900' => 'ghi', 'Gohir.D05G164200' => 'ghi', 'Gohir.D05G355500' => 'ghi', 'Gohir.D06G010400' => 'ghi', 'Gohir.D06G111250' => 'ghi', 'Gohir.D06G132000' => 'ghi', 'Gohir.D06G210500' => 'ghi', 'Gohir.D07G165675' => 'ghi', 'Gohir.D08G062240' => 'ghi', 'Gohir.D08G086101' => 'ghi', 'Gohir.D08G138060' => 'ghi', 'Gohir.D09G072300' => 'ghi', 'Gohir.D10G041400' => 'ghi', 'Gohir.D11G191020' => 'ghi', 'Gohir.D11G212066' => 'ghi', 'Gohir.D12G036300' => 'ghi', 'Gohir.D12G168600' => 'ghi', 'Gohir.D13G150600' => 'ghi', 'Gorai.001G057300' => 'gra', 'Gorai.002G069900' => 'gra', 'Gorai.002G200000' => 'gra', 'Gorai.003G067600' => 'gra', 'Gorai.005G074800' => 'gra', 'Gorai.006G087300' => 'gra', 'Gorai.008G037500' => 'gra', 'Gorai.008G181400' => 'gra', 'Gorai.009G169400' => 'gra', 'Gorai.009G387900' => 'gra', 'Gorai.010G013300' => 'gra', 'Gorai.010G153800' => 'gra', 'Gorai.010G255800' => 'gra', 'Gorai.011G043700' => 'gra', 'Gorai.011G198900' => 'gra', 'Gorai.013G168400' => 'gra', 'GSVIVG01005212001' => 'vvi', 'GSVIVG01006163001' => 'vvi', 'GSVIVG01009625001' => 'vvi', 'GSVIVG01014338001' => 'vvi', 'GSVIVG01020005001' => 'vvi', 'GSVIVG01021450001' => 'vvi', 'GSVIVG01023975001' => 'vvi', 'GSVIVG01034490001' => 'vvi', 'HanXRQChr04g0112071' => 'han', 'HanXRQChr05g0131151' => 'han', 'HanXRQChr09g0262371' => 'han', 'HanXRQChr09g0268401' => 'han', 'HanXRQChr10g0279241' => 'han', 'HanXRQChr10g0297961' => 'han', 'HanXRQChr11g0326231' => 'han', 'HanXRQChr11g0328471' => 'han', 'HanXRQChr16g0507941' => 'han', 'HanXRQChr17g0560211' => 'han', 'Haze_02108' => 'cav', 'Haze_02428' => 'cav', 'Haze_05593' => 'cav', 'Haze_06448' => 'cav', 'Haze_09427' => 'cav', 'Haze_12022' => 'cav', 'Haze_17612' => 'cav', 'Haze_17928' => 'cav', 'Hma1.2p1_0032F.1_g019250' => 'hma', 'Hma1.2p1_0163F.1_g072690' => 'hma', 'Hma1.2p1_0265F.1_g106710' => 'hma', 'Hma1.2p1_0286F.1_g113970' => 'hma', 'Hma1.2p1_0363F.1_g136640' => 'hma', 'Hma1.2p1_0584F.1_g183470' => 'hma', 'Hma1.2p1_0885F.1_g232570' => 'hma', 'HPP92_006022' => 'vpl', 'HPP92_007320' => 'vpl', 'HPP92_011521' => 'vpl', 'HPP92_019387' => 'vpl', 'HPP92_024038' => 'vpl', 'Hund05891' => 'sun', 'Hund06450' => 'sun', 'Hund12053' => 'sun', 'Hund16800' => 'sun', 'Hund21222' => 'sun', 'Hund22896' => 'sun', 'Hund23746' => 'sun', 'Hund27083' => 'sun', 'Lalb_Chr02g0141831' => 'lal', 'Lalb_Chr02g0141841' => 'lal', 'Lalb_Chr05g0220411' => 'lal', 'Lalb_Chr06g0162081' => 'lal', 'Lalb_Chr09g0327651' => 'lal', 'Lalb_Chr13g0295051' => 'lal', 'Lalb_Chr15g0086801' => 'lal', 'Lalb_Chr16g0383781' => 'lal', 'Lalb_Chr16g0383791' => 'lal', 'Lalb_Chr18g0055441' => 'lal', 'Lalb_Chr18g0059611' => 'lal', 'Lalb_Chr20g0109661' => 'lal', 'Lalb_Chr20g0109831' => 'lal', 'Lalb_Chr20g0121871' => 'lal', 'Lalb_Chr22g0355361' => 'lal', 'Lalb_Chr25g0286371' => 'lal', 'Lj1A1187G43' => 'lonja', 'Lj1A1205T50' => 'lonja', 'Lj1A800G33' => 'lonja', 'Lj1C1187T7' => 'lonja', 'Lj1C843T11' => 'lonja', 'Lj1g0010940' => 'lja', 'Lj2A288T69' => 'lonja', 'Lj3g0024276' => 'lja', 'Lj4A47T76' => 'lonja', 'Lj4g0005805' => 'lja', 'Lj4g0006097' => 'lja', 'Lj4g0008528' => 'lja', 'Lj4g0024907' => 'lja', 'Lj5g0012472' => 'lja', 'Lj5g0018648' => 'lja', 'Lj6C789G1' => 'lonja', 'Lj6g0004000' => 'lja', 'Lj7A292G67' => 'lonja', 'Lj7A292T64' => 'lonja', 'Lj9A400T58' => 'lonja', 'Lsat_1_v5_gn_1_126181' => 'lsa', 'Lsat_1_v5_gn_4_123041' => 'lsa', 'Lsat_1_v5_gn_4_133620' => 'lsa', 'Lsat_1_v5_gn_4_53221' => 'lsa', 'Lsat_1_v5_gn_4_71961' => 'lsa', 'Lsat_1_v5_gn_7_105241' => 'lsa', 'Lsat_1_v5_gn_7_21361' => 'lsa', 'Lsat_1_v5_gn_7_28860' => 'lsa', 'Lsat_1_v5_gn_7_31260' => 'lsa', 'Lsat_1_v5_gn_8_52801' => 'lsa', 'Manes.02G191400' => 'mes', 'Manes.03G110100' => 'mes', 'Manes.04G071100' => 'mes', 'Manes.05G100500' => 'mes', 'Manes.05G164700' => 'mes', 'Manes.15G087000' => 'mes', 'Manes.15G121500' => 'mes', 'Manes.16G028300' => 'mes', 'Manes.17G046100' => 'mes', 'Manes.17G069800' => 'mes', 'Manes.18G100500' => 'mes', 'Mapoly0002s0109' => 'mpo', 'Mapoly0024s0007' => 'mpo', 'Mapoly0089s0032' => 'mpo', 'MBI04_g42241_MAGBIO' => 'mbi', 'MBI05_g11988_MAGBIO' => 'mbi', 'MBI05_g35452_MAGBIO' => 'mbi', 'MBI07_g30179_MAGBIO' => 'mbi', 'MBI07_g35859_MAGBIO' => 'mbi', 'MBI07_g35860_MAGBIO' => 'mbi', 'MBI07_g37166_MAGBIO' => 'mbi', 'MBI08_g18172_MAGBIO' => 'mbi', 'MBI09_g08441_MAGBIO' => 'mbi', 'MBI13_g01676_MAGBIO' => 'mbi', 'MBI14_g42955_MAGBIO' => 'mbi', 'MBI16_g13161_MAGBIO' => 'mbi', 'MBI17_g27204_MAGBIO' => 'mbi', 'MBI19_g21595_MAGBIO' => 'mbi', 'MD00G1148400' => 'mdo', 'MD02G1301200' => 'mdo', 'MD03G1227800' => 'mdo', 'MD05G1041100' => 'mdo', 'MD05G1124800' => 'mdo', 'MD05G1284000' => 'mdo', 'MD05G1338800' => 'mdo', 'MD05G1338900' => 'mdo', 'MD07G1022800' => 'mdo', 'MD10G1047500' => 'mdo', 'MD10G1127500' => 'mdo', 'MD10G1262300' => 'mdo', 'MD10G1293800' => 'mdo', 'MD16G1074300' => 'mdo', 'Medtr1g021670' => 'mtr', 'Medtr1g096320' => 'mtr', 'Medtr2g013690' => 'mtr', 'Medtr2g019450' => 'mtr', 'Medtr2g085170' => 'mtr', 'Medtr4g088785' => 'mtr', 'Medtr8g055930' => 'mtr', 'Medtr8g085850' => 'mtr', 'MELO3C002605.2' => 'cme', 'MELO3C003891.2' => 'cme', 'MELO3C004012.2' => 'cme', 'MELO3C007134.2' => 'cme', 'MELO3C008118.2' => 'cme', 'MELO3C016700.2' => 'cme', 'MELO3C024127.2' => 'cme', 'MELO3C033361.2' => 'cme', 'MELO3C033362.2' => 'cme', 'Migut.C00430' => 'egut', 'Migut.C01246' => 'egut', 'Migut.E00101' => 'egut', 'Migut.H01486' => 'egut', 'Migut.H01939' => 'egut', 'Migut.K00360' => 'egut', 'Migut.M00910' => 'egut', 'Migut.M01139' => 'egut', 'Migut.N02677' => 'egut', 'MSTRG.13252' => 'ama', 'MSTRG.14701' => 'ama', 'MSTRG.1521' => 'ama', 'MSTRG.15884' => 'ama', 'MSTRG.16242' => 'ama', 'MSTRG.22285' => 'ama', 'MSTRG.22444' => 'ama', 'MSTRG.2349' => 'ama', 'MSTRG.26308' => 'ama', 'MSTRG.28296' => 'ama', 'MSTRG.9895' => 'ama', 'Nitab4.5_0000110g0060' => 'nta', 'Nitab4.5_0000420g0130' => 'nta', 'Nitab4.5_0000422g0030' => 'nta', 'Nitab4.5_0000560g0180' => 'nta', 'Nitab4.5_0000703g0100' => 'nta', 'Nitab4.5_0000786g0200' => 'nta', 'Nitab4.5_0001336g0020' => 'nta', 'Nitab4.5_0001796g0030' => 'nta', 'Nitab4.5_0003348g0060' => 'nta', 'Nitab4.5_0003698g0040' => 'nta', 'Nitab4.5_0003942g0090' => 'nta', 'Nitab4.5_0004775g0070' => 'nta', 'Nitab4.5_0004864g0030' => 'nta', 'Nitab4.5_0005615g0020' => 'nta', 'Nitab4.5_0009288g0030' => 'nta', 'Nitab4.5_0009341g0010' => 'nta', 'Nitab4.5_0009535g0010' => 'nta', 'Nn1g03995' => 'nnu', 'Nn1g04100' => 'nnu', 'Nn1g06530' => 'nnu', 'Nn3g16404' => 'nnu', 'Nn3g17212' => 'nnu', 'Nn3g20776' => 'nnu', 'Nn3g21923' => 'nnu', 'Nn5g27737' => 'nnu', 'Nn5g29461' => 'nnu', 'Nn7g38355' => 'nnu', 'Nn8g39873' => 'nnu', 'Oeu000548.2' => 'oeu', 'Oeu004672.1' => 'oeu', 'Oeu015605.2' => 'oeu', 'Oeu016092.1' => 'oeu', 'Oeu017879.3' => 'oeu', 'Oeu024910.1' => 'oeu', 'Oeu028965.1' => 'oeu', 'Oeu031269.1' => 'oeu', 'Oeu031270.1' => 'oeu', 'Oeu032535.1' => 'oeu', 'Oeu034151.1' => 'oeu', 'Oeu034152.1' => 'oeu', 'Oeu034588.2' => 'oeu', 'Oeu050846.1' => 'oeu', 'Oeu050849.2' => 'oeu', 'Oeu051063.2' => 'oeu', 'Oeu052368.1' => 'oeu', 'Oeu052370.1' => 'oeu', 'Os01g0210400' => 'osa', 'Os01g0304300' => 'osa', 'Os01g0749100' => 'osa', 'Os02g0745800' => 'osa', 'Os03g0769050' => 'osa', 'Os05g0531500' => 'osa', 'Os06g0724300' => 'osa', 'Os11g0198100' => 'osa', 'Peaxi162Scf00069g01425' => 'pax', 'Peaxi162Scf00280g00811' => 'pax', 'Peaxi162Scf00310g00615' => 'pax', 'Peaxi162Scf00362g00542' => 'pax', 'Peaxi162Scf00461g00310' => 'pax', 'Peaxi162Scf00530g00118' => 'pax', 'Peaxi162Scf00541g00057' => 'pax', 'Peaxi162Scf00661g00017' => 'pax', 'Peaxi162Scf00926g00027' => 'pax', 'Peaxi162Scf01064g00263' => 'pax', 'Peaxi162Scf01211g00135' => 'pax', 'PGR004G2336' => 'pgr', 'PGR042G0327' => 'pgr', 'PGR042G1957' => 'pgr', 'PGR042G2003' => 'pgr', 'PGR042G3929' => 'pgr', 'PGR083G1137' => 'pgr', 'PGR083G1364' => 'pgr', 'PGSC0003DMG400003381' => 'stu', 'PGSC0003DMG400003417' => 'stu', 'PGSC0003DMG400008981' => 'stu', 'PGSC0003DMG400012417' => 'stu', 'PGSC0003DMG400012823' => 'stu', 'PGSC0003DMG400016885' => 'stu', 'PGSC0003DMG400022812' => 'stu', 'PGSC0003DMG400029726' => 'stu', 'PGSC0003DMG401009243' => 'stu', 'PGSC0003DMG401031505' => 'stu', 'PGSC0003DMG402031505' => 'stu', 'Phvul.001G017600' => 'pvu', 'Phvul.002G193500' => 'pvu', 'Phvul.002G228900' => 'pvu', 'Phvul.002G236800' => 'pvu', 'Phvul.003G049500' => 'pvu', 'Phvul.005G072000' => 'pvu', 'Phvul.006G164800' => 'pvu', 'Phvul.006G185100' => 'pvu', 'Phvul.007G090000' => 'pvu', 'Potri.001G399800' => 'ptr', 'Potri.002G149900' => 'ptr', 'Potri.004G044100' => 'ptr', 'Potri.004G177600' => 'ptr', 'Potri.009G138000' => 'ptr', 'Potri.010G094000' => 'ptr', 'Potri.011G053000' => 'ptr', 'Potri.011G119300' => 'ptr', 'Potri.013G113700' => 'ptr', 'Potri.018G107800' => 'ptr', 'Potri.019G084100' => 'ptr', 'Pp3c14_23720' => 'ppa', 'Pp3c16_6340' => 'ppa', 'Pp3c23_13420' => 'ppa', 'Pp3c24_2740' => 'ppa', 'Pp3c25_860' => 'ppa', 'Pp3c8_21750' => 'ppa', 'Prupe.1G273000' => 'ppe', 'Prupe.1G273700' => 'ppe', 'Prupe.1G274100' => 'ppe', 'Prupe.2G023300' => 'ppe', 'Prupe.4G048000' => 'ppe', 'Prupe.4G080400' => 'ppe', 'Prupe.4G181200' => 'ppe', 'Prupe.8G056900' => 'ppe', 'Prupe.8G168700' => 'ppe', 'Psat1g189080' => 'psa', 'Psat1g204760' => 'psa', 'Psat4g175560' => 'psa', 'Psat4g177720' => 'psa', 'Psat5g244240' => 'psa', 'Psat6g010720' => 'psa', 'Psat6g187200' => 'psa', 'Psat7g072040' => 'psa', 'PSO017G3501' => 'pso', 'PSO063G2148' => 'pso', 'PSO063G5608' => 'pso', 'PSO210G6392' => 'pso', 'PSO541G2319' => 'pso', 'PSO541G2836' => 'pso', 'PSO541G4012' => 'pso', 'PSO541G6253' => 'pso', 'PSO675G0580' => 'pso', 'PSO675G0856' => 'pso', 'PSO675G5635' => 'pso', 'PSO675G9157' => 'pso', 'PSO832G1660' => 'pso', 'PSO832G1969' => 'pso', 'QL02p007186' => 'qlo', 'QL02p033904' => 'qlo', 'QL03p064391' => 'qlo', 'QL05p040593' => 'qlo', 'QL05p058242' => 'qlo', 'QL08p021825' => 'qlo', 'QL11p004981' => 'qlo', 'RcHm_v2.0_Chr1g0318301' => 'rch', 'RcHm_v2.0_Chr4g0418501' => 'rch', 'RcHm_v2.0_Chr4g0439971' => 'rch', 'RcHm_v2.0_Chr5g0008541' => 'rch', 'RcHm_v2.0_Chr5g0014101' => 'rch', 'RcHm_v2.0_Chr5g0014131' => 'rch', 'RcHm_v2.0_Chr5g0033621' => 'rch', 'RcHm_v2.0_Chr6g0272041' => 'rch', 'RcHm_v2.0_Chr6g0278831' => 'rch', 'Rhsim02G0130400' => 'rsi', 'Rhsim02G0171100' => 'rsi', 'Rhsim05G0053000' => 'rsi', 'Rhsim05G0053100' => 'rsi', 'Rhsim06G0096500' => 'rsi', 'Rhsim06G0096600' => 'rsi', 'Rhsim06G0199100' => 'rsi', 'Rhsim12G0062300' => 'rsi', 'Rhsim12G0062800' => 'rsi', 'Sabra02G0118600' => 'sbr', 'Sabra04G0027300' => 'sbr', 'Sabra04G0119500' => 'sbr', 'Sabra08G0112500' => 'sbr', 'Sabra11G0036800' => 'sbr', 'Sabra11G0103800' => 'sbr', 'Sabra13G0096300' => 'sbr', 'Sabra16G0262300' => 'sbr', 'Sabra18G0091700' => 'sbr', 'Sabra19G0095400' => 'sbr', 'SalBow6G3080' => 'sbo', 'SalBow7G1157' => 'sbo', 'SalBow7G2123' => 'sbo', 'SalBow7G2285' => 'sbo', 'SalBow7G3537' => 'sbo', 'SalBow8G2947' => 'sbo', 'SalBow8G4463' => 'sbo', 'SalBow8G5466' => 'sbo', 'Sc01g0001750' => 'sci', 'Sc02g0006640' => 'sci', 'Sc02g0006670' => 'sci', 'Sc04g0008220' => 'sci', 'Sc05g0006190' => 'sci', 'Sc08g0002760' => 'sci', 'Sc17g0006170' => 'sci', 'Sc22g0002050' => 'sci', 'Sc23g0001190' => 'sci', 'Sc24g0000980' => 'sci', 'Sed0006245' => 'sed', 'Sed0007543' => 'sed', 'Sed0009411' => 'sed', 'Sed0010765' => 'sed', 'Sed0012944' => 'sed', 'Sed0014682' => 'sed', 'Sed0016174' => 'sed', 'Sed0016796' => 'sed', 'Sed0020317' => 'sed', 'Sed0021467' => 'sed', 'SEGI_01316' => 'sgi', 'SEGI_03374' => 'sgi', 'SEGI_16265' => 'sgi', 'SEGI_18569' => 'sgi', 'SEGI_20351' => 'sgi', 'SEGI_26395' => 'sgi', 'SEGI_29469' => 'sgi', 'SEGI_34771' => 'sgi', 'SEGI_36769' => 'sgi', 'SEGI_37139' => 'sgi', 'SGA_v2.0_scaffold100G29687' => 'sas', 'SGA_v2.0_scaffold118G32472' => 'sas', 'SGA_v2.0_scaffold14G07051' => 'sas', 'SGA_v2.0_scaffold183G39845' => 'sas', 'SGA_v2.0_scaffold1G00174' => 'sas', 'SGA_v2.0_scaffold22G09714' => 'sas', 'SGA_v2.0_scaffold333G48992' => 'sas', 'SGA_v2.0_scaffold46G17491' => 'sas', 'SGA_v2.0_scaffold49G18294' => 'sas', 'SGA_v2.0_scaffold63G21658' => 'sas', 'SHI01741' => 'shi', 'SHI05771' => 'shi', 'SHI18077' => 'shi', 'SHI20525' => 'shi', 'SHI20527' => 'shi', 'SHI20528' => 'shi', 'SMO172G0185' => 'smo', 'SMO198G0020' => 'smo', 'SMO351G0006' => 'smo', 'SMO356G0118' => 'smo', 'SMO358G0296' => 'smo', 'SMO367G0079' => 'smo', 'SMO367G1277' => 'smo', 'Solyc01g014220.3' => 'sly', 'Solyc01g111770.2' => 'sly', 'Solyc02g078180.3' => 'sly', 'Solyc03g006430.3' => 'sly', 'Solyc03g006456.1' => 'sly', 'Solyc03g079860.2' => 'sly', 'Solyc04g079770.3' => 'sly', 'Solyc05g007430.4' => 'sly', 'Solyc07g063150.3' => 'sly', 'Solyc08g016620.3' => 'sly', 'Solyc09g057590.3' => 'sly', 'Solyc09g057600.1' => 'sly', 'Solyc10g009050.3' => 'sly', 'Solyc11g017420.2' => 'sly', 'Sopen01g053810' => 'spe', 'Sopen02g023040' => 'spe', 'Sopen03g002440' => 'spe', 'Sopen04g033350' => 'spe', 'Sopen05g003310' => 'spe', 'Sopen07g004050' => 'spe', 'Sopen07g031340' => 'spe', 'Sopen08g006990' => 'spe', 'Sopen10g004830' => 'spe', 'Sopen11g009370' => 'spe', 'Sp1g24450' => 'spa', 'Sp1g29670' => 'spa', 'Sp1g39600' => 'spa', 'Sp2g11080' => 'spa', 'Sp2g13970' => 'spa', 'Sp4g16130' => 'spa', 'Sp6g13080' => 'spa', 'Sp7g37270' => 'spa', 'TAR371G0065' => 'tar', 'TAR376G0340' => 'tar', 'TAR376G0435' => 'tar', 'TAR381G0002' => 'tar', 'TAR381G1236' => 'tar', 'TAR624G0055' => 'tar', 'TAR624G0324' => 'tar', 'TAR624G0696' => 'tar', 'TAR624G0906' => 'tar', 'TAR625G0107' => 'tar', 'TAR626G0015' => 'tar', 'TAR626G1356' => 'tar', 'TAR627G0888' => 'tar', 'TAR628G0399' => 'tar', 'TAR628G1327' => 'tar', 'TAR629G2831' => 'tar', 'TAR629G2874' => 'tar', 'TAR633G1432' => 'tar', 'TAR633G2771' => 'tar', 'THA.LOC104803394' => 'tha', 'THA.LOC104805153' => 'tha', 'THA.LOC104806784' => 'tha', 'THA.LOC104810473' => 'tha', 'THA.LOC104813100' => 'tha', 'THA.LOC104814215' => 'tha', 'THA.LOC104815554' => 'tha', 'THA.LOC104820544' => 'tha', 'THA.LOC104824754' => 'tha', 'THA.LOC104827717' => 'tha', 'Thecc.02G031400' => 'tca', 'Thecc.02G055900' => 'tca', 'Thecc.02G350800' => 'tca', 'Thecc.06G150900' => 'tca', 'Thecc.06G186600' => 'tca', 'Thecc.07G089600' => 'tca', 'Thecc.08G020400' => 'tca', 'Thecc.08G182100' => 'tca', 'Thhalv10000873m.g' => 'esa', 'Thhalv10004185m.g' => 'esa', 'Thhalv10006981m.g' => 'esa', 'Thhalv10007204m.g' => 'esa', 'Thhalv10011374m.g' => 'esa', 'Thhalv10013482m.g' => 'esa', 'Thhalv10017801m.g' => 'esa', 'Thhalv10024983m.g' => 'esa', 'TPR.G12072' => 'tpr', 'TPR.G15769' => 'tpr', 'TPR.G16504' => 'tpr', 'TPR.G16506' => 'tpr', 'TPR.G24345' => 'tpr', 'TPR.G26666' => 'tpr', 'TPR.G27320' => 'tpr', 'TPR.G31819' => 'tpr', 'TPR.G38879' => 'tpr', 'TPR.G39015' => 'tpr', 'TPR.G8819' => 'tpr', 'TWI09G0924' => 'twi', 'TWI12G0811' => 'twi', 'TWI12G1294' => 'twi', 'TWI31G0150' => 'twi', 'TWI36G1262' => 'twi', 'TWI38G1287' => 'twi', 'TWI38G1633' => 'twi', 'TWI38G1982' => 'twi', 'TWI39G0116' => 'twi', 'TWI60G1011' => 'twi', 'TWI63G0171' => 'twi', 'TWI73G0839' => 'twi', 'TWI79G1511' => 'twi', 'unitig_0.g915' => 'ugi', 'unitig_0.g916' => 'ugi', 'unitig_21.g20219' => 'ugi', 'unitig_21.g20416' => 'ugi', 'unitig_578.g16132' => 'ugi', 'unitig_578.g16718' => 'ugi', 'unitig_62.g23481' => 'ugi', 'unitig_744.g24535' => 'ugi', 'unitig_749.g13525' => 'ugi', 'vmacro01248' => 'vma', 'vmacro02290' => 'vma', 'vmacro10946' => 'vma', 'vmacro11865' => 'vma', 'vmacro12493' => 'vma', 'vmacro17322' => 'vma', 'vmacro21599' => 'vma', 'vmacro23041' => 'vma', 'VMungo0251G0004' => 'vmu', 'VMungo0251G2639' => 'vmu', 'VMungo0251G2967' => 'vmu', 'VMungo0540G0864' => 'vmu', 'VMungo0540G1569' => 'vmu', 'VMungo0647G0317' => 'vmu', 'VMungo0720G1373' => 'vmu', 'VMungo0720G1508' => 'vmu', 'VMungo1080G0485' => 'vmu', 'VMungo1215G3177' => 'vmu', 'Zm00001eb112600' => 'zma', 'Zm00001eb120220' => 'zma', 'Zm00001eb153240' => 'zma', 'Zm00001eb168880' => 'zma', 'Zm00001eb213920' => 'zma', 'Zm00001eb228280' => 'zma', 'Zm00001eb254580' => 'zma', 'Zm00001eb272180' => 'zma', 'Zm00001eb293190' => 'zma', 'Zm00001eb322930' => 'zma', 'Zm00001eb353360' => 'zma', 'Zm00001eb353390' => 'zma', 'Zm00001eb353430' => 'zma', 'Zm00001eb353440' => 'zma', 'Zm00001eb353780' => 'zma' ), 'gf_id' => 'HOM05D000499', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000499' ), 'data_identifier' => 'HOM05D000499', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000499', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1066', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p29780' => 'bna', 'A02p33180' => 'bna', 'A03p16470' => 'bna', 'A03p66010' => 'bna', 'A04p25970' => 'bna', 'A06p01270' => 'bna', 'A06p46080' => 'bna', 'A07p11400' => 'bna', 'A08p01840' => 'bna', 'A08p08230' => 'bna', 'A08p25740' => 'bna', 'A09p32070' => 'bna', 'A09p37830' => 'bna', 'A09p42840' => 'bna', 'A09p42850' => 'bna', 'Aa31LG10G2060' => 'aar', 'Aa31LG2G7410' => 'aar', 'Aa31LG6G10200' => 'aar', 'Aa31LG6G16680' => 'aar', 'Aa31LG6G8470' => 'aar', 'Aa31LG9G12730' => 'aar', 'Aa31LG9G13680' => 'aar', 'Aa31LG9G14920' => 'aar', 'Aa31LG9G6650' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4977' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5467' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3254' => 'aag', 'Actinidia02578' => 'ach', 'Actinidia07693' => 'ach', 'Actinidia08413' => 'ach', 'Actinidia08414' => 'ach', 'Actinidia15289' => 'ach', 'Actinidia19871' => 'ach', 'Actinidia21475' => 'ach', 'Actinidia22576' => 'ach', 'Actinidia28327' => 'ach', 'Actinidia32491' => 'ach', 'Actinidia39463' => 'ach', 'Actinidia39571' => 'ach', 'Ah.01g013750' => 'amhyb', 'Ah.01g023210' => 'amhyb', 'Ah.04g164850' => 'amhyb', 'Ah.05g178060' => 'amhyb', 'Ah.07g204270' => 'amhyb', 'Ah.07g208480' => 'amhyb', 'Ah.09g237410' => 'amhyb', 'Ah.14g089460' => 'amhyb', 'AL1G41790' => 'aly', 'AL1G49050' => 'aly', 'AL1G53810' => 'aly', 'AL1G61400' => 'aly', 'AL4G18580' => 'aly', 'AL5G12510' => 'aly', 'AL5G12540' => 'aly', 'AL6G43230' => 'aly', 'AL7G10370' => 'aly', 'AL7G19250' => 'aly', 'AL8G12240' => 'aly', 'AL8G18540' => 'aly', 'Aqoxy1G02409' => 'aox', 'Aqoxy2G03993' => 'aox', 'Aqoxy3G03357' => 'aox', 'Aqoxy4G00785' => 'aox', 'Aqoxy5G02598' => 'aox', 'Aqoxy6G00132' => 'aox', 'Aqoxy7G01776' => 'aox', 'Aqoxy7G02316' => 'aox', 'Aqoxy7G03973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.12AFKW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B8730' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27IQR1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3F75VG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3RE0GA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41TCQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.527VTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FIR39' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5W8UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DA38EV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ63HS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H1I32C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HC27T5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4M8AP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7N3CZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9UVDZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LS1NQA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT1D4B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SKC4TM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCFV76' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF9Q1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQWD9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1ZM88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WE07RT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YCK7VH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJE6Q6' => 'arhy', 'AT1G28240' => 'ath', 'AT1G34550' => 'ath', 'AT1G53040' => 'ath', 'AT2G02910' => 'ath', 'AT4G09630' => 'ath', 'AT4G38500' => 'ath', 'AT5G42660' => 'ath', 'AT5G46220' => 'ath', 'ATR0152G026' => 'atr', 'ATR0564G343' => 'atr', 'ATR0706G151' => 'atr', 'ATR0733G207' => 'atr', 'ATR0751G234' => 'atr', 'ATR0807G048' => 'atr', 'ATR1091G084' => 'atr', 'Atru.chr10.1229' => 'acertr', 'Atru.chr10.1230' => 'acertr', 'Atru.chr10.1874' => 'acertr', 'Atru.chr11.1808' => 'acertr', 'Atru.chr13.1795' => 'acertr', 'Atru.chr13.570' => 'acertr', 'Atru.chr2.2608' => 'acertr', 'Atru.chr2.2609' => 'acertr', 'Atru.chr5.3428' => 'acertr', 'Atru.chr8.1171' => 'acertr', 'AUR62004651' => 'cqu', 'AUR62008675' => 'cqu', 'AUR62010014' => 'cqu', 'AUR62013004' => 'cqu', 'AUR62014825' => 'cqu', 'AUR62015015' => 'cqu', 'AUR62015151' => 'cqu', 'AUR62017020' => 'cqu', 'AUR62019422' => 'cqu', 'AUR62023570' => 'cqu', 'AUR62025571' => 'cqu', 'AUR62029098' => 'cqu', 'AUR62033863' => 'cqu', 'AUR62034296' => 'cqu', 'AUR62040075' => 'cqu', 'BcaB02g07334' => 'bca', 'BcaB02g10575' => 'bca', 'BcaB03g12119' => 'bca', 'BcaB03g12120' => 'bca', 'BcaB03g13945' => 'bca', 'BcaB04g17123' => 'bca', 'BcaB04g17867' => 'bca', 'BcaB04g19839' => 'bca', 'BcaB07g30317' => 'bca', 'BcaB07g32432' => 'bca', 'BcaB07g33362' => 'bca', 'BcaB08g36611' => 'bca', 'BcaC01g00028' => 'bca', 'BcaC01g01356' => 'bca', 'BcaC01g02034' => 'bca', 'BcaC01g06051' => 'bca', 'BcaC03g16839' => 'bca', 'BcaC03g17176' => 'bca', 'BcaC05g26829' => 'bca', 'BcaC06g31490' => 'bca', 'BcaC06g35344' => 'bca', 'BcaC06g36570' => 'bca', 'BcaC07g37537' => 'bca', 'BcaC08g43491' => 'bca', 'BcaC08g43773' => 'bca', 'BcaNung00234' => 'bca', 'BcaNung01982' => 'bca', 'BcaNung03707' => 'bca', 'BcaNung06454' => 'bca', 'BolC2t10762H' => 'bol', 'BolC2t11191H' => 'bol', 'BolC3t14322H' => 'bol', 'BolC3t19747H' => 'bol', 'BolC3t21425H' => 'bol', 'BolC4t27800H' => 'bol', 'BolC5t31423H' => 'bol', 'BolC6t35951H' => 'bol', 'BolC6t36282H' => 'bol', 'BolC7t40678H' => 'bol', 'BolC7t40679H' => 'bol', 'BolC7t42222H' => 'bol', 'BolC7t43492H' => 'bol', 'BolC7t46785H' => 'bol', 'BolC8t47853H' => 'bol', 'BolC9t56805H' => 'bol', 'BraA02t08000Z' => 'bra', 'BraA02t08341Z' => 'bra', 'BraA03t10936Z' => 'bra', 'BraA03t15657Z' => 'bra', 'BraA04t18100Z' => 'bra', 'BraA05t20523Z' => 'bra', 'BraA06t23353Z' => 'bra', 'BraA06t27473Z' => 'bra', 'BraA06t27769Z' => 'bra', 'BraA07t28928Z' => 'bra', 'BraA08t32236Z' => 'bra', 'BraA08t32841Z' => 'bra', 'BraA08t34524Z' => 'bra', 'BraA09t38742Z' => 'bra', 'BraA09t39295Z' => 'bra', 'C02p47180' => 'bna', 'C02p50990' => 'bna', 'C03p19360' => 'bna', 'C03p74950' => 'bna', 'C03p91000' => 'bna', 'C04p63260' => 'bna', 'C05p27050' => 'bna', 'C06p08750' => 'bna', 'C06p11490' => 'bna', 'C07p02820' => 'bna', 'C07p17180' => 'bna', 'C07p29440' => 'bna', 'C07p63730' => 'bna', 'C09p39260' => 'bna', 'CAN.G1164.34' => 'can', 'CAN.G1164.39' => 'can', 'CAN.G1530.3' => 'can', 'CAN.G162.61' => 'can', 'CAN.G176.6' => 'can', 'CAN.G289.49' => 'can', 'CAN.G370.21' => 'can', 'CAN.G370.22' => 'can', 'CAN.G371.117' => 'can', 'CAN.G58.37' => 'can', 'CAN.G588.98' => 'can', 'CANSAT21G2266' => 'cansat', 'CANSAT25G2799' => 'cansat', 'CANSAT35G0862' => 'cansat', 'CANSAT35G1704' => 'cansat', 'CANSAT35G1760' => 'cansat', 'CANSAT56G3971' => 'cansat', 'CANSAT56G4116' => 'cansat', 'CANSAT80G1259' => 'cansat', 'CARHR027730' => 'chi', 'CARHR033880' => 'chi', 'CARHR043270' => 'chi', 'CARHR145330' => 'chi', 'CARHR145340' => 'chi', 'CARHR175570' => 'chi', 'CARHR181570' => 'chi', 'CARHR258470' => 'chi', 'CARHR260490' => 'chi', 'CARHR294220' => 'chi', 'Carub.0001s2668' => 'cru', 'Carub.0001s3257' => 'cru', 'Carub.0001s4220' => 'cru', 'Carub.0005s0179' => 'cru', 'Carub.0006s2807' => 'cru', 'Carub.0007s0039' => 'cru', 'Carub.0008s0169' => 'cru', 'Carub.0008s0636' => 'cru', 'Ca_00338_v3' => 'car', 'Ca_00542_v3' => 'car', 'Ca_01844_v3' => 'car', 'Ca_10611_v3' => 'car', 'Ca_13326_v3' => 'car', 'Ca_17944_v3' => 'car', 'Ca_18546_v3' => 'car', 'Ca_24219_v3' => 'car', 'Ca_29972_v3' => 'car', 'CBR_g3681' => 'cbr', 'CBR_g40021' => 'cbr', 'Cc01_g08140' => 'ccan', 'Cc02_g13410' => 'ccan', 'Cc02_g37480' => 'ccan', 'Cc05_g12030' => 'ccan', 'Cc09_g03370' => 'ccan', 'Cc09_g10300' => 'ccan', 'Cc10_g03530' => 'ccan', 'Cc10_g11380' => 'ccan', 'CDE01G0176' => 'cde', 'CDE02G0675' => 'cde', 'CDE02G0942' => 'cde', 'CDE02G1153' => 'cde', 'CDE02G4177' => 'cde', 'CDE04G2117' => 'cde', 'CDE04G2736' => 'cde', 'CDE08G1161' => 'cde', 'CDE09G1238' => 'cde', 'Cfa000467' => 'cfa', 'Cfa000947' => 'cfa', 'Cfa004969' => 'cfa', 'Cfa005284' => 'cfa', 'Cfa008993' => 'cfa', 'Cfa018187' => 'cfa', 'Cfa018454' => 'cfa', 'Cfa020585' => 'cfa', 'Ciclev10000424m.g' => 'ccl', 'Ciclev10003605m.g' => 'ccl', 'Ciclev10007828m.g' => 'ccl', 'Ciclev10014620m.g' => 'ccl', 'Ciclev10015169m.g' => 'ccl', 'Ciclev10018291m.g' => 'ccl', 'Ciclev10028256m.g' => 'ccl', 'Ciclev10033822m.g' => 'ccl', 'CiPaw.05G060300' => 'cil', 'CiPaw.05G085000' => 'cil', 'CiPaw.06G083700' => 'cil', 'CiPaw.06G120300' => 'cil', 'CiPaw.09G060500' => 'cil', 'CiPaw.09G123800' => 'cil', 'CiPaw.11G169700' => 'cil', 'CiPaw.12G118300' => 'cil', 'CiPaw.15G071000' => 'cil', 'CiPaw.15G081900' => 'cil', 'ClCG01G024610' => 'cla', 'ClCG03G006070' => 'cla', 'ClCG05G019250' => 'cla', 'ClCG09G009500' => 'cla', 'ClCG11G008200' => 'cla', 'ClCG11G018080' => 'cla', 'COL.COLO4_17373' => 'col', 'COL.COLO4_22994' => 'col', 'COL.COLO4_26389' => 'col', 'COL.COLO4_27170' => 'col', 'COL.COLO4_31074' => 'col', 'COL.COLO4_31465' => 'col', 'COL.COLO4_36438' => 'col', 'COL.COLO4_36439' => 'col', 'Cpa.g.c38781' => 'cpa', 'Cpa.g.sc128.12' => 'cpa', 'Cpa.g.sc166.7' => 'cpa', 'Cpa.g.sc166.8' => 'cpa', 'Cpa.g.sc20.111' => 'cpa', 'Cpa.g.sc27.31' => 'cpa', 'Cpa.g.sc64.36' => 'cpa', 'Cpa.g.sc64.37' => 'cpa', 'Cpa.g.sc66.49' => 'cpa', 'Cpa.g.sc80.64' => 'cpa', 'CsaV3_1G012320' => 'csa', 'CsaV3_2G008480' => 'csa', 'CsaV3_2G033450' => 'csa', 'CsaV3_3G044830' => 'csa', 'CsaV3_4G033710' => 'csa', 'CsaV3_6G051730' => 'csa', 'CsaV3_7G025350' => 'csa', 'CSS0001067' => 'camsi', 'CSS0005996' => 'camsi', 'CSS0006590' => 'camsi', 'CSS0009673' => 'camsi', 'CSS0010201' => 'camsi', 'CSS0010549' => 'camsi', 'CSS0011364' => 'camsi', 'CSS0014473' => 'camsi', 'CSS0014961' => 'camsi', 'CSS0020191' => 'camsi', 'CSS0021165' => 'camsi', 'CSS0022306' => 'camsi', 'CSS0030591' => 'camsi', 'CSS0030696' => 'camsi', 'CSS0032653' => 'camsi', 'CSS0037487' => 'camsi', 'CSS0041102' => 'camsi', 'CSS0041261' => 'camsi', 'CSS0046246' => 'camsi', 'CSS0049256' => 'camsi', 'DCAR_004075' => 'dca', 'DCAR_011538' => 'dca', 'DCAR_019553' => 'dca', 'DCAR_020952' => 'dca', 'DCAR_021739' => 'dca', 'DCAR_027407' => 'dca', 'DCAR_027913' => 'dca', 'DCAR_028066' => 'dca', 'Dinv05899' => 'din', 'Dinv07563' => 'din', 'Dinv08010' => 'din', 'Dinv14125' => 'din', 'Dinv20172' => 'din', 'Dinv30743' => 'din', 'Dinv31229' => 'din', 'Dinv34162' => 'din', 'Dinv36028' => 'din', 'Dinv39368' => 'din', 'Dinv40565' => 'din', 'Dinv41706' => 'din', 'Duzib052G0089' => 'dzi', 'Duzib116G0641' => 'dzi', 'Duzib132G0069' => 'dzi', 'Duzib132G1219' => 'dzi', 'Duzib147G0278' => 'dzi', 'Duzib160G0480' => 'dzi', 'Duzib170G0661' => 'dzi', 'Duzib177G0591' => 'dzi', 'Duzib187G1353' => 'dzi', 'Duzib192G0858' => 'dzi', 'Duzib192G0883' => 'dzi', 'Duzib213G0506' => 'dzi', 'Duzib235G0289' => 'dzi', 'Duzib251G0422' => 'dzi', 'ECA232G3898' => 'eca', 'ECA233G5950' => 'eca', 'ECA234G1699' => 'eca', 'ECA234G2421' => 'eca', 'ECA236G0426' => 'eca', 'ECA236G4331' => 'eca', 'ECA248G2573' => 'eca', 'EL10Ac1g00077' => 'bvu', 'EL10Ac1g01746' => 'bvu', 'EL10Ac2g03464' => 'bvu', 'EL10Ac4g08176' => 'bvu', 'EL10Ac7g17521' => 'bvu', 'EL10Ac8g20386' => 'bvu', 'EL10Ac9g21343' => 'bvu', 'EL10Ac9g22688' => 'bvu', 'Eucgr.B03434' => 'egr', 'Eucgr.D00618' => 'egr', 'Eucgr.E02395' => 'egr', 'Eucgr.F01129' => 'egr', 'Eucgr.F02622' => 'egr', 'Eucgr.F04207' => 'egr', 'FAN01G0570' => 'fan', 'FAN03G3351' => 'fan', 'FAN06G3702' => 'fan', 'FAN07G2149' => 'fan', 'FAN10G3758' => 'fan', 'FAN11G1170' => 'fan', 'FAN11G2050' => 'fan', 'FAN11G2724' => 'fan', 'FAN12G1700' => 'fan', 'FAN12G2028' => 'fan', 'FAN15G1160' => 'fan', 'FAN15G3063' => 'fan', 'FAN16G2540' => 'fan', 'FAN16G3077' => 'fan', 'FAN16G3624' => 'fan', 'FAN17G0221' => 'fan', 'FAN20G2492' => 'fan', 'FAN20G2905' => 'fan', 'FAN21G0548' => 'fan', 'FAN21G1300' => 'fan', 'FAN22G0077' => 'fan', 'FAN22G1315' => 'fan', 'FAN24G1280' => 'fan', 'FAN24G1445' => 'fan', 'FAN24G3527' => 'fan', 'FAN25G0464' => 'fan', 'FAN25G2885' => 'fan', 'FAN25G3270' => 'fan', 'FAN27G1101' => 'fan', 'FAN27G2846' => 'fan', 'FAN27G3524' => 'fan', 'FvH4_2g11770' => 'fve', 'FvH4_2g15630' => 'fve', 'FvH4_3g05570' => 'fve', 'FvH4_3g09110' => 'fve', 'FvH4_3g19940' => 'fve', 'FvH4_4g04821' => 'fve', 'FvH4_4g31480' => 'fve', 'FvH4_7g01740' => 'fve', 'Glyma.05G130400' => 'gma', 'Glyma.05G156400' => 'gma', 'Glyma.07G197000' => 'gma', 'Glyma.08G085151' => 'gma', 'Glyma.08G114500' => 'gma', 'Glyma.08G300400' => 'gma', 'Glyma.10G215800' => 'gma', 'Glyma.12G224400' => 'gma', 'Glyma.13G179300' => 'gma', 'Glyma.13G218151' => 'gma', 'Glyma.13G238800' => 'gma', 'Glyma.13G276900' => 'gma', 'Glyma.14G078200' => 'gma', 'Glyma.15G074500' => 'gma', 'Glyma.15G094100' => 'gma', 'Glyma.17G247200' => 'gma', 'Glyma.18G120100' => 'gma', 'Glyma.20G176000' => 'gma', 'Gohir.A01G063600' => 'ghi', 'Gohir.A01G170301' => 'ghi', 'Gohir.A02G060500' => 'ghi', 'Gohir.A05G133850' => 'ghi', 'Gohir.A05G161400' => 'ghi', 'Gohir.A06G012900' => 'ghi', 'Gohir.A06G035901' => 'ghi', 'Gohir.A06G127100' => 'ghi', 'Gohir.A06G210500' => 'ghi', 'Gohir.A08G008650' => 'ghi', 'Gohir.A09G072700' => 'ghi', 'Gohir.A09G088301' => 'ghi', 'Gohir.A10G040600' => 'ghi', 'Gohir.A12G036300' => 'ghi', 'Gohir.A12G143350' => 'ghi', 'Gohir.A12G165500' => 'ghi', 'Gohir.A13G145700' => 'ghi', 'Gohir.D01G050000' => 'ghi', 'Gohir.D01G051366' => 'ghi', 'Gohir.D01G161350' => 'ghi', 'Gohir.D02G065900' => 'ghi', 'Gohir.D05G164200' => 'ghi', 'Gohir.D05G355500' => 'ghi', 'Gohir.D06G010400' => 'ghi', 'Gohir.D06G111250' => 'ghi', 'Gohir.D06G132000' => 'ghi', 'Gohir.D06G210500' => 'ghi', 'Gohir.D07G165675' => 'ghi', 'Gohir.D08G062240' => 'ghi', 'Gohir.D08G086101' => 'ghi', 'Gohir.D08G138060' => 'ghi', 'Gohir.D09G072300' => 'ghi', 'Gohir.D10G041400' => 'ghi', 'Gohir.D11G191020' => 'ghi', 'Gohir.D11G212066' => 'ghi', 'Gohir.D12G036300' => 'ghi', 'Gohir.D12G168600' => 'ghi', 'Gohir.D13G150600' => 'ghi', 'Gorai.001G057300' => 'gra', 'Gorai.002G069900' => 'gra', 'Gorai.002G200000' => 'gra', 'Gorai.003G067600' => 'gra', 'Gorai.005G074800' => 'gra', 'Gorai.006G087300' => 'gra', 'Gorai.008G037500' => 'gra', 'Gorai.008G181400' => 'gra', 'Gorai.009G169400' => 'gra', 'Gorai.009G387900' => 'gra', 'Gorai.010G013300' => 'gra', 'Gorai.010G153800' => 'gra', 'Gorai.010G255800' => 'gra', 'Gorai.011G043700' => 'gra', 'Gorai.011G198900' => 'gra', 'Gorai.013G168400' => 'gra', 'GSVIVG01005212001' => 'vvi', 'GSVIVG01006163001' => 'vvi', 'GSVIVG01009625001' => 'vvi', 'GSVIVG01014338001' => 'vvi', 'GSVIVG01020005001' => 'vvi', 'GSVIVG01021450001' => 'vvi', 'GSVIVG01023975001' => 'vvi', 'GSVIVG01034490001' => 'vvi', 'HanXRQChr04g0112071' => 'han', 'HanXRQChr05g0131151' => 'han', 'HanXRQChr09g0262371' => 'han', 'HanXRQChr09g0268401' => 'han', 'HanXRQChr10g0279241' => 'han', 'HanXRQChr10g0297961' => 'han', 'HanXRQChr11g0326231' => 'han', 'HanXRQChr11g0328471' => 'han', 'HanXRQChr16g0507941' => 'han', 'HanXRQChr17g0560211' => 'han', 'Haze_02108' => 'cav', 'Haze_02428' => 'cav', 'Haze_05593' => 'cav', 'Haze_06448' => 'cav', 'Haze_09427' => 'cav', 'Haze_12022' => 'cav', 'Haze_17612' => 'cav', 'Haze_17928' => 'cav', 'Hma1.2p1_0032F.1_g019250' => 'hma', 'Hma1.2p1_0163F.1_g072690' => 'hma', 'Hma1.2p1_0265F.1_g106710' => 'hma', 'Hma1.2p1_0286F.1_g113970' => 'hma', 'Hma1.2p1_0363F.1_g136640' => 'hma', 'Hma1.2p1_0584F.1_g183470' => 'hma', 'Hma1.2p1_0885F.1_g232570' => 'hma', 'HPP92_006022' => 'vpl', 'HPP92_007320' => 'vpl', 'HPP92_011521' => 'vpl', 'HPP92_019387' => 'vpl', 'HPP92_024038' => 'vpl', 'Hund05891' => 'sun', 'Hund06450' => 'sun', 'Hund12053' => 'sun', 'Hund16800' => 'sun', 'Hund21222' => 'sun', 'Hund22896' => 'sun', 'Hund23746' => 'sun', 'Hund27083' => 'sun', 'Lalb_Chr02g0141831' => 'lal', 'Lalb_Chr02g0141841' => 'lal', 'Lalb_Chr05g0220411' => 'lal', 'Lalb_Chr06g0162081' => 'lal', 'Lalb_Chr09g0327651' => 'lal', 'Lalb_Chr13g0295051' => 'lal', 'Lalb_Chr15g0086801' => 'lal', 'Lalb_Chr16g0383781' => 'lal', 'Lalb_Chr16g0383791' => 'lal', 'Lalb_Chr18g0055441' => 'lal', 'Lalb_Chr18g0059611' => 'lal', 'Lalb_Chr20g0109661' => 'lal', 'Lalb_Chr20g0109831' => 'lal', 'Lalb_Chr20g0121871' => 'lal', 'Lalb_Chr22g0355361' => 'lal', 'Lalb_Chr25g0286371' => 'lal', 'Lj1A1187G43' => 'lonja', 'Lj1A1205T50' => 'lonja', 'Lj1A800G33' => 'lonja', 'Lj1C1187T7' => 'lonja', 'Lj1C843T11' => 'lonja', 'Lj1g0010940' => 'lja', 'Lj2A288T69' => 'lonja', 'Lj3g0024276' => 'lja', 'Lj4A47T76' => 'lonja', 'Lj4g0005805' => 'lja', 'Lj4g0006097' => 'lja', 'Lj4g0008528' => 'lja', 'Lj4g0024907' => 'lja', 'Lj5g0012472' => 'lja', 'Lj5g0018648' => 'lja', 'Lj6C789G1' => 'lonja', 'Lj6g0004000' => 'lja', 'Lj7A292G67' => 'lonja', 'Lj7A292T64' => 'lonja', 'Lj9A400T58' => 'lonja', 'Lsat_1_v5_gn_1_126181' => 'lsa', 'Lsat_1_v5_gn_4_123041' => 'lsa', 'Lsat_1_v5_gn_4_133620' => 'lsa', 'Lsat_1_v5_gn_4_53221' => 'lsa', 'Lsat_1_v5_gn_4_71961' => 'lsa', 'Lsat_1_v5_gn_7_105241' => 'lsa', 'Lsat_1_v5_gn_7_21361' => 'lsa', 'Lsat_1_v5_gn_7_28860' => 'lsa', 'Lsat_1_v5_gn_7_31260' => 'lsa', 'Lsat_1_v5_gn_8_52801' => 'lsa', 'Manes.02G191400' => 'mes', 'Manes.03G110100' => 'mes', 'Manes.04G071100' => 'mes', 'Manes.05G100500' => 'mes', 'Manes.05G164700' => 'mes', 'Manes.15G087000' => 'mes', 'Manes.15G121500' => 'mes', 'Manes.16G028300' => 'mes', 'Manes.17G046100' => 'mes', 'Manes.17G069800' => 'mes', 'Manes.18G100500' => 'mes', 'Mapoly0002s0109' => 'mpo', 'Mapoly0024s0007' => 'mpo', 'Mapoly0089s0032' => 'mpo', 'MBI04_g42241_MAGBIO' => 'mbi', 'MBI05_g11988_MAGBIO' => 'mbi', 'MBI05_g35452_MAGBIO' => 'mbi', 'MBI07_g30179_MAGBIO' => 'mbi', 'MBI07_g35859_MAGBIO' => 'mbi', 'MBI07_g35860_MAGBIO' => 'mbi', 'MBI07_g37166_MAGBIO' => 'mbi', 'MBI08_g18172_MAGBIO' => 'mbi', 'MBI09_g08441_MAGBIO' => 'mbi', 'MBI13_g01676_MAGBIO' => 'mbi', 'MBI14_g42955_MAGBIO' => 'mbi', 'MBI16_g13161_MAGBIO' => 'mbi', 'MBI17_g27204_MAGBIO' => 'mbi', 'MBI19_g21595_MAGBIO' => 'mbi', 'MD00G1148400' => 'mdo', 'MD02G1301200' => 'mdo', 'MD03G1227800' => 'mdo', 'MD05G1041100' => 'mdo', 'MD05G1124800' => 'mdo', 'MD05G1284000' => 'mdo', 'MD05G1338800' => 'mdo', 'MD05G1338900' => 'mdo', 'MD07G1022800' => 'mdo', 'MD10G1047500' => 'mdo', 'MD10G1127500' => 'mdo', 'MD10G1262300' => 'mdo', 'MD10G1293800' => 'mdo', 'MD16G1074300' => 'mdo', 'Medtr1g021670' => 'mtr', 'Medtr1g096320' => 'mtr', 'Medtr2g013690' => 'mtr', 'Medtr2g019450' => 'mtr', 'Medtr2g085170' => 'mtr', 'Medtr4g088785' => 'mtr', 'Medtr8g055930' => 'mtr', 'Medtr8g085850' => 'mtr', 'MELO3C002605.2' => 'cme', 'MELO3C003891.2' => 'cme', 'MELO3C004012.2' => 'cme', 'MELO3C007134.2' => 'cme', 'MELO3C008118.2' => 'cme', 'MELO3C016700.2' => 'cme', 'MELO3C024127.2' => 'cme', 'MELO3C033361.2' => 'cme', 'MELO3C033362.2' => 'cme', 'Migut.C00430' => 'egut', 'Migut.C01246' => 'egut', 'Migut.E00101' => 'egut', 'Migut.H01486' => 'egut', 'Migut.H01939' => 'egut', 'Migut.K00360' => 'egut', 'Migut.M00910' => 'egut', 'Migut.M01139' => 'egut', 'Migut.N02677' => 'egut', 'MSTRG.13252' => 'ama', 'MSTRG.14701' => 'ama', 'MSTRG.1521' => 'ama', 'MSTRG.15884' => 'ama', 'MSTRG.16242' => 'ama', 'MSTRG.22285' => 'ama', 'MSTRG.22444' => 'ama', 'MSTRG.2349' => 'ama', 'MSTRG.26308' => 'ama', 'MSTRG.28296' => 'ama', 'MSTRG.9895' => 'ama', 'Nitab4.5_0000110g0060' => 'nta', 'Nitab4.5_0000420g0130' => 'nta', 'Nitab4.5_0000422g0030' => 'nta', 'Nitab4.5_0000560g0180' => 'nta', 'Nitab4.5_0000703g0100' => 'nta', 'Nitab4.5_0000786g0200' => 'nta', 'Nitab4.5_0001336g0020' => 'nta', 'Nitab4.5_0001796g0030' => 'nta', 'Nitab4.5_0003348g0060' => 'nta', 'Nitab4.5_0003698g0040' => 'nta', 'Nitab4.5_0003942g0090' => 'nta', 'Nitab4.5_0004775g0070' => 'nta', 'Nitab4.5_0004864g0030' => 'nta', 'Nitab4.5_0005615g0020' => 'nta', 'Nitab4.5_0009288g0030' => 'nta', 'Nitab4.5_0009341g0010' => 'nta', 'Nitab4.5_0009535g0010' => 'nta', 'Nn1g03995' => 'nnu', 'Nn1g04100' => 'nnu', 'Nn1g06530' => 'nnu', 'Nn3g16404' => 'nnu', 'Nn3g17212' => 'nnu', 'Nn3g20776' => 'nnu', 'Nn3g21923' => 'nnu', 'Nn5g27737' => 'nnu', 'Nn5g29461' => 'nnu', 'Nn7g38355' => 'nnu', 'Nn8g39873' => 'nnu', 'Oeu000548.2' => 'oeu', 'Oeu004672.1' => 'oeu', 'Oeu015605.2' => 'oeu', 'Oeu016092.1' => 'oeu', 'Oeu017879.3' => 'oeu', 'Oeu024910.1' => 'oeu', 'Oeu028965.1' => 'oeu', 'Oeu031269.1' => 'oeu', 'Oeu031270.1' => 'oeu', 'Oeu032535.1' => 'oeu', 'Oeu034151.1' => 'oeu', 'Oeu034152.1' => 'oeu', 'Oeu034588.2' => 'oeu', 'Oeu050846.1' => 'oeu', 'Oeu050849.2' => 'oeu', 'Oeu051063.2' => 'oeu', 'Oeu052368.1' => 'oeu', 'Oeu052370.1' => 'oeu', 'Os01g0210400' => 'osa', 'Os01g0304300' => 'osa', 'Os01g0749100' => 'osa', 'Os02g0745800' => 'osa', 'Os03g0769050' => 'osa', 'Os05g0531500' => 'osa', 'Os06g0724300' => 'osa', 'Os11g0198100' => 'osa', 'Peaxi162Scf00069g01425' => 'pax', 'Peaxi162Scf00280g00811' => 'pax', 'Peaxi162Scf00310g00615' => 'pax', 'Peaxi162Scf00362g00542' => 'pax', 'Peaxi162Scf00461g00310' => 'pax', 'Peaxi162Scf00530g00118' => 'pax', 'Peaxi162Scf00541g00057' => 'pax', 'Peaxi162Scf00661g00017' => 'pax', 'Peaxi162Scf00926g00027' => 'pax', 'Peaxi162Scf01064g00263' => 'pax', 'Peaxi162Scf01211g00135' => 'pax', 'PGR004G2336' => 'pgr', 'PGR042G0327' => 'pgr', 'PGR042G1957' => 'pgr', 'PGR042G2003' => 'pgr', 'PGR042G3929' => 'pgr', 'PGR083G1137' => 'pgr', 'PGR083G1364' => 'pgr', 'PGSC0003DMG400003381' => 'stu', 'PGSC0003DMG400003417' => 'stu', 'PGSC0003DMG400008981' => 'stu', 'PGSC0003DMG400012417' => 'stu', 'PGSC0003DMG400012823' => 'stu', 'PGSC0003DMG400016885' => 'stu', 'PGSC0003DMG400022812' => 'stu', 'PGSC0003DMG400029726' => 'stu', 'PGSC0003DMG401009243' => 'stu', 'PGSC0003DMG401031505' => 'stu', 'PGSC0003DMG402031505' => 'stu', 'Phvul.001G017600' => 'pvu', 'Phvul.002G193500' => 'pvu', 'Phvul.002G228900' => 'pvu', 'Phvul.002G236800' => 'pvu', 'Phvul.003G049500' => 'pvu', 'Phvul.005G072000' => 'pvu', 'Phvul.006G164800' => 'pvu', 'Phvul.006G185100' => 'pvu', 'Phvul.007G090000' => 'pvu', 'Potri.001G399800' => 'ptr', 'Potri.002G149900' => 'ptr', 'Potri.004G044100' => 'ptr', 'Potri.004G177600' => 'ptr', 'Potri.009G138000' => 'ptr', 'Potri.010G094000' => 'ptr', 'Potri.011G053000' => 'ptr', 'Potri.011G119300' => 'ptr', 'Potri.013G113700' => 'ptr', 'Potri.018G107800' => 'ptr', 'Potri.019G084100' => 'ptr', 'Pp3c14_23720' => 'ppa', 'Pp3c16_6340' => 'ppa', 'Pp3c23_13420' => 'ppa', 'Pp3c24_2740' => 'ppa', 'Pp3c25_860' => 'ppa', 'Pp3c8_21750' => 'ppa', 'Prupe.1G273000' => 'ppe', 'Prupe.1G273700' => 'ppe', 'Prupe.1G274100' => 'ppe', 'Prupe.2G023300' => 'ppe', 'Prupe.4G048000' => 'ppe', 'Prupe.4G080400' => 'ppe', 'Prupe.4G181200' => 'ppe', 'Prupe.8G056900' => 'ppe', 'Prupe.8G168700' => 'ppe', 'Psat1g189080' => 'psa', 'Psat1g204760' => 'psa', 'Psat4g175560' => 'psa', 'Psat4g177720' => 'psa', 'Psat5g244240' => 'psa', 'Psat6g010720' => 'psa', 'Psat6g187200' => 'psa', 'Psat7g072040' => 'psa', 'PSO017G3501' => 'pso', 'PSO063G2148' => 'pso', 'PSO063G5608' => 'pso', 'PSO210G6392' => 'pso', 'PSO541G2319' => 'pso', 'PSO541G2836' => 'pso', 'PSO541G4012' => 'pso', 'PSO541G6253' => 'pso', 'PSO675G0580' => 'pso', 'PSO675G0856' => 'pso', 'PSO675G5635' => 'pso', 'PSO675G9157' => 'pso', 'PSO832G1660' => 'pso', 'PSO832G1969' => 'pso', 'QL02p007186' => 'qlo', 'QL02p033904' => 'qlo', 'QL03p064391' => 'qlo', 'QL05p040593' => 'qlo', 'QL05p058242' => 'qlo', 'QL08p021825' => 'qlo', 'QL11p004981' => 'qlo', 'RcHm_v2.0_Chr1g0318301' => 'rch', 'RcHm_v2.0_Chr4g0418501' => 'rch', 'RcHm_v2.0_Chr4g0439971' => 'rch', 'RcHm_v2.0_Chr5g0008541' => 'rch', 'RcHm_v2.0_Chr5g0014101' => 'rch', 'RcHm_v2.0_Chr5g0014131' => 'rch', 'RcHm_v2.0_Chr5g0033621' => 'rch', 'RcHm_v2.0_Chr6g0272041' => 'rch', 'RcHm_v2.0_Chr6g0278831' => 'rch', 'Rhsim02G0130400' => 'rsi', 'Rhsim02G0171100' => 'rsi', 'Rhsim05G0053000' => 'rsi', 'Rhsim05G0053100' => 'rsi', 'Rhsim06G0096500' => 'rsi', 'Rhsim06G0096600' => 'rsi', 'Rhsim06G0199100' => 'rsi', 'Rhsim12G0062300' => 'rsi', 'Rhsim12G0062800' => 'rsi', 'Sabra02G0118600' => 'sbr', 'Sabra04G0027300' => 'sbr', 'Sabra04G0119500' => 'sbr', 'Sabra08G0112500' => 'sbr', 'Sabra11G0036800' => 'sbr', 'Sabra11G0103800' => 'sbr', 'Sabra13G0096300' => 'sbr', 'Sabra16G0262300' => 'sbr', 'Sabra18G0091700' => 'sbr', 'Sabra19G0095400' => 'sbr', 'SalBow6G3080' => 'sbo', 'SalBow7G1157' => 'sbo', 'SalBow7G2123' => 'sbo', 'SalBow7G2285' => 'sbo', 'SalBow7G3537' => 'sbo', 'SalBow8G2947' => 'sbo', 'SalBow8G4463' => 'sbo', 'SalBow8G5466' => 'sbo', 'Sc01g0001750' => 'sci', 'Sc02g0006640' => 'sci', 'Sc02g0006670' => 'sci', 'Sc04g0008220' => 'sci', 'Sc05g0006190' => 'sci', 'Sc08g0002760' => 'sci', 'Sc17g0006170' => 'sci', 'Sc22g0002050' => 'sci', 'Sc23g0001190' => 'sci', 'Sc24g0000980' => 'sci', 'Sed0006245' => 'sed', 'Sed0007543' => 'sed', 'Sed0009411' => 'sed', 'Sed0010765' => 'sed', 'Sed0012944' => 'sed', 'Sed0014682' => 'sed', 'Sed0016174' => 'sed', 'Sed0016796' => 'sed', 'Sed0020317' => 'sed', 'Sed0021467' => 'sed', 'SEGI_01316' => 'sgi', 'SEGI_03374' => 'sgi', 'SEGI_16265' => 'sgi', 'SEGI_18569' => 'sgi', 'SEGI_20351' => 'sgi', 'SEGI_26395' => 'sgi', 'SEGI_29469' => 'sgi', 'SEGI_34771' => 'sgi', 'SEGI_36769' => 'sgi', 'SEGI_37139' => 'sgi', 'SGA_v2.0_scaffold100G29687' => 'sas', 'SGA_v2.0_scaffold118G32472' => 'sas', 'SGA_v2.0_scaffold14G07051' => 'sas', 'SGA_v2.0_scaffold183G39845' => 'sas', 'SGA_v2.0_scaffold1G00174' => 'sas', 'SGA_v2.0_scaffold22G09714' => 'sas', 'SGA_v2.0_scaffold333G48992' => 'sas', 'SGA_v2.0_scaffold46G17491' => 'sas', 'SGA_v2.0_scaffold49G18294' => 'sas', 'SGA_v2.0_scaffold63G21658' => 'sas', 'SHI01741' => 'shi', 'SHI05771' => 'shi', 'SHI18077' => 'shi', 'SHI20525' => 'shi', 'SHI20527' => 'shi', 'SHI20528' => 'shi', 'SMO172G0185' => 'smo', 'SMO198G0020' => 'smo', 'SMO351G0006' => 'smo', 'SMO356G0118' => 'smo', 'SMO358G0296' => 'smo', 'SMO367G0079' => 'smo', 'SMO367G1277' => 'smo', 'Solyc01g014220.3' => 'sly', 'Solyc01g111770.2' => 'sly', 'Solyc02g078180.3' => 'sly', 'Solyc03g006430.3' => 'sly', 'Solyc03g006456.1' => 'sly', 'Solyc03g079860.2' => 'sly', 'Solyc04g079770.3' => 'sly', 'Solyc05g007430.4' => 'sly', 'Solyc07g063150.3' => 'sly', 'Solyc08g016620.3' => 'sly', 'Solyc09g057590.3' => 'sly', 'Solyc09g057600.1' => 'sly', 'Solyc10g009050.3' => 'sly', 'Solyc11g017420.2' => 'sly', 'Sopen01g053810' => 'spe', 'Sopen02g023040' => 'spe', 'Sopen03g002440' => 'spe', 'Sopen04g033350' => 'spe', 'Sopen05g003310' => 'spe', 'Sopen07g004050' => 'spe', 'Sopen07g031340' => 'spe', 'Sopen08g006990' => 'spe', 'Sopen10g004830' => 'spe', 'Sopen11g009370' => 'spe', 'Sp1g24450' => 'spa', 'Sp1g29670' => 'spa', 'Sp1g39600' => 'spa', 'Sp2g11080' => 'spa', 'Sp2g13970' => 'spa', 'Sp4g16130' => 'spa', 'Sp6g13080' => 'spa', 'Sp7g37270' => 'spa', 'TAR371G0065' => 'tar', 'TAR376G0340' => 'tar', 'TAR376G0435' => 'tar', 'TAR381G0002' => 'tar', 'TAR381G1236' => 'tar', 'TAR624G0055' => 'tar', 'TAR624G0324' => 'tar', 'TAR624G0696' => 'tar', 'TAR624G0906' => 'tar', 'TAR625G0107' => 'tar', 'TAR626G0015' => 'tar', 'TAR626G1356' => 'tar', 'TAR627G0888' => 'tar', 'TAR628G0399' => 'tar', 'TAR628G1327' => 'tar', 'TAR629G2831' => 'tar', 'TAR629G2874' => 'tar', 'TAR633G1432' => 'tar', 'TAR633G2771' => 'tar', 'THA.LOC104803394' => 'tha', 'THA.LOC104805153' => 'tha', 'THA.LOC104806784' => 'tha', 'THA.LOC104810473' => 'tha', 'THA.LOC104813100' => 'tha', 'THA.LOC104814215' => 'tha', 'THA.LOC104815554' => 'tha', 'THA.LOC104820544' => 'tha', 'THA.LOC104824754' => 'tha', 'THA.LOC104827717' => 'tha', 'Thecc.02G031400' => 'tca', 'Thecc.02G055900' => 'tca', 'Thecc.02G350800' => 'tca', 'Thecc.06G150900' => 'tca', 'Thecc.06G186600' => 'tca', 'Thecc.07G089600' => 'tca', 'Thecc.08G020400' => 'tca', 'Thecc.08G182100' => 'tca', 'Thhalv10000873m.g' => 'esa', 'Thhalv10004185m.g' => 'esa', 'Thhalv10006981m.g' => 'esa', 'Thhalv10007204m.g' => 'esa', 'Thhalv10011374m.g' => 'esa', 'Thhalv10013482m.g' => 'esa', 'Thhalv10017801m.g' => 'esa', 'Thhalv10024983m.g' => 'esa', 'TPR.G12072' => 'tpr', 'TPR.G15769' => 'tpr', 'TPR.G16504' => 'tpr', 'TPR.G16506' => 'tpr', 'TPR.G24345' => 'tpr', 'TPR.G26666' => 'tpr', 'TPR.G27320' => 'tpr', 'TPR.G31819' => 'tpr', 'TPR.G38879' => 'tpr', 'TPR.G39015' => 'tpr', 'TPR.G8819' => 'tpr', 'TWI09G0924' => 'twi', 'TWI12G0811' => 'twi', 'TWI12G1294' => 'twi', 'TWI31G0150' => 'twi', 'TWI36G1262' => 'twi', 'TWI38G1287' => 'twi', 'TWI38G1633' => 'twi', 'TWI38G1982' => 'twi', 'TWI39G0116' => 'twi', 'TWI60G1011' => 'twi', 'TWI63G0171' => 'twi', 'TWI73G0839' => 'twi', 'TWI79G1511' => 'twi', 'unitig_0.g915' => 'ugi', 'unitig_0.g916' => 'ugi', 'unitig_21.g20219' => 'ugi', 'unitig_21.g20416' => 'ugi', 'unitig_578.g16132' => 'ugi', 'unitig_578.g16718' => 'ugi', 'unitig_62.g23481' => 'ugi', 'unitig_744.g24535' => 'ugi', 'unitig_749.g13525' => 'ugi', 'vmacro01248' => 'vma', 'vmacro02290' => 'vma', 'vmacro10946' => 'vma', 'vmacro11865' => 'vma', 'vmacro12493' => 'vma', 'vmacro17322' => 'vma', 'vmacro21599' => 'vma', 'vmacro23041' => 'vma', 'VMungo0251G0004' => 'vmu', 'VMungo0251G2639' => 'vmu', 'VMungo0251G2967' => 'vmu', 'VMungo0540G0864' => 'vmu', 'VMungo0540G1569' => 'vmu', 'VMungo0647G0317' => 'vmu', 'VMungo0720G1373' => 'vmu', 'VMungo0720G1508' => 'vmu', 'VMungo1080G0485' => 'vmu', 'VMungo1215G3177' => 'vmu', 'Zm00001eb112600' => 'zma', 'Zm00001eb120220' => 'zma', 'Zm00001eb153240' => 'zma', 'Zm00001eb168880' => 'zma', 'Zm00001eb213920' => 'zma', 'Zm00001eb228280' => 'zma', 'Zm00001eb254580' => 'zma', 'Zm00001eb272180' => 'zma', 'Zm00001eb293190' => 'zma', 'Zm00001eb322930' => 'zma', 'Zm00001eb353360' => 'zma', 'Zm00001eb353390' => 'zma', 'Zm00001eb353430' => 'zma', 'Zm00001eb353440' => 'zma', 'Zm00001eb353780' => 'zma' ) $gf_id = 'HOM05D000499' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000499' ) $data_identifier = 'HOM05D000499' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 29, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 12, 'amhyb' => (int) 8, 'aly' => (int) 12, 'aox' => (int) 9, 'arhy' => (int) 26, 'ath' => (int) 8, 'atr' => (int) 7, 'acertr' => (int) 10, 'cqu' => (int) 15, 'bca' => (int) 29, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 11, 'cansat' => (int) 8, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 9, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 8, 'cpa' => (int) 10, 'csa' => (int) 7, 'camsi' => (int) 20, 'dca' => (int) 8, 'din' => (int) 12, 'dzi' => (int) 14, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 6, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 38, 'gra' => (int) 16, 'vvi' => (int) 8, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 5, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 11, 'lja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 11, 'mpo' => (int) 3, 'mbi' => (int) 14, 'mdo' => (int) 14, 'mtr' => (int) 8, 'cme' => (int) 9, 'egut' => (int) 9, 'ama' => (int) 11, 'nta' => (int) 17, 'nnu' => (int) 11, 'oeu' => (int) 18, 'osa' => (int) 8, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 6, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 9, 'rsi' => (int) 9, 'sbr' => (int) 10, 'sbo' => (int) 8, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 10, 'sas' => (int) 10, 'shi' => (int) 6, 'smo' => (int) 7, 'sly' => (int) 14, 'spe' => (int) 10, 'spa' => (int) 8, 'tar' => (int) 19, 'tha' => (int) 10, 'tca' => (int) 8, 'esa' => (int) 8, 'tpr' => (int) 11, 'twi' => (int) 13, 'ugi' => (int) 9, 'vma' => (int) 8, 'vmu' => (int) 10, 'zma' => (int) 15 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb353780' $species_info = array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ) $local_species = 'can' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000499', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1066', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p29780' => 'bna', 'A02p33180' => 'bna', 'A03p16470' => 'bna', 'A03p66010' => 'bna', 'A04p25970' => 'bna', 'A06p01270' => 'bna', 'A06p46080' => 'bna', 'A07p11400' => 'bna', 'A08p01840' => 'bna', 'A08p08230' => 'bna', 'A08p25740' => 'bna', 'A09p32070' => 'bna', 'A09p37830' => 'bna', 'A09p42840' => 'bna', 'A09p42850' => 'bna', 'Aa31LG10G2060' => 'aar', 'Aa31LG2G7410' => 'aar', 'Aa31LG6G10200' => 'aar', 'Aa31LG6G16680' => 'aar', 'Aa31LG6G8470' => 'aar', 'Aa31LG9G12730' => 'aar', 'Aa31LG9G13680' => 'aar', 'Aa31LG9G14920' => 'aar', 'Aa31LG9G6650' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4977' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5467' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3254' => 'aag', 'Actinidia02578' => 'ach', 'Actinidia07693' => 'ach', 'Actinidia08413' => 'ach', 'Actinidia08414' => 'ach', 'Actinidia15289' => 'ach', 'Actinidia19871' => 'ach', 'Actinidia21475' => 'ach', 'Actinidia22576' => 'ach', 'Actinidia28327' => 'ach', 'Actinidia32491' => 'ach', 'Actinidia39463' => 'ach', 'Actinidia39571' => 'ach', 'Ah.01g013750' => 'amhyb', 'Ah.01g023210' => 'amhyb', 'Ah.04g164850' => 'amhyb', 'Ah.05g178060' => 'amhyb', 'Ah.07g204270' => 'amhyb', 'Ah.07g208480' => 'amhyb', 'Ah.09g237410' => 'amhyb', 'Ah.14g089460' => 'amhyb', 'AL1G41790' => 'aly', 'AL1G49050' => 'aly', 'AL1G53810' => 'aly', 'AL1G61400' => 'aly', 'AL4G18580' => 'aly', 'AL5G12510' => 'aly', 'AL5G12540' => 'aly', 'AL6G43230' => 'aly', 'AL7G10370' => 'aly', 'AL7G19250' => 'aly', 'AL8G12240' => 'aly', 'AL8G18540' => 'aly', 'Aqoxy1G02409' => 'aox', 'Aqoxy2G03993' => 'aox', 'Aqoxy3G03357' => 'aox', 'Aqoxy4G00785' => 'aox', 'Aqoxy5G02598' => 'aox', 'Aqoxy6G00132' => 'aox', 'Aqoxy7G01776' => 'aox', 'Aqoxy7G02316' => 'aox', 'Aqoxy7G03973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.12AFKW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B8730' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27IQR1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3F75VG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3RE0GA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41TCQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.527VTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FIR39' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5W8UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DA38EV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ63HS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H1I32C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HC27T5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4M8AP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7N3CZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9UVDZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LS1NQA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT1D4B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SKC4TM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCFV76' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF9Q1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQWD9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1ZM88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WE07RT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YCK7VH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJE6Q6' => 'arhy', 'AT1G28240' => 'ath', 'AT1G34550' => 'ath', 'AT1G53040' => 'ath', 'AT2G02910' => 'ath', 'AT4G09630' => 'ath', 'AT4G38500' => 'ath', 'AT5G42660' => 'ath', 'AT5G46220' => 'ath', 'ATR0152G026' => 'atr', 'ATR0564G343' => 'atr', 'ATR0706G151' => 'atr', 'ATR0733G207' => 'atr', 'ATR0751G234' => 'atr', 'ATR0807G048' => 'atr', 'ATR1091G084' => 'atr', 'Atru.chr10.1229' => 'acertr', 'Atru.chr10.1230' => 'acertr', 'Atru.chr10.1874' => 'acertr', 'Atru.chr11.1808' => 'acertr', 'Atru.chr13.1795' => 'acertr', 'Atru.chr13.570' => 'acertr', 'Atru.chr2.2608' => 'acertr', 'Atru.chr2.2609' => 'acertr', 'Atru.chr5.3428' => 'acertr', 'Atru.chr8.1171' => 'acertr', 'AUR62004651' => 'cqu', 'AUR62008675' => 'cqu', 'AUR62010014' => 'cqu', 'AUR62013004' => 'cqu', 'AUR62014825' => 'cqu', 'AUR62015015' => 'cqu', 'AUR62015151' => 'cqu', 'AUR62017020' => 'cqu', 'AUR62019422' => 'cqu', 'AUR62023570' => 'cqu', 'AUR62025571' => 'cqu', 'AUR62029098' => 'cqu', 'AUR62033863' => 'cqu', 'AUR62034296' => 'cqu', 'AUR62040075' => 'cqu', 'BcaB02g07334' => 'bca', 'BcaB02g10575' => 'bca', 'BcaB03g12119' => 'bca', 'BcaB03g12120' => 'bca', 'BcaB03g13945' => 'bca', 'BcaB04g17123' => 'bca', 'BcaB04g17867' => 'bca', 'BcaB04g19839' => 'bca', 'BcaB07g30317' => 'bca', 'BcaB07g32432' => 'bca', 'BcaB07g33362' => 'bca', 'BcaB08g36611' => 'bca', 'BcaC01g00028' => 'bca', 'BcaC01g01356' => 'bca', 'BcaC01g02034' => 'bca', 'BcaC01g06051' => 'bca', 'BcaC03g16839' => 'bca', 'BcaC03g17176' => 'bca', 'BcaC05g26829' => 'bca', 'BcaC06g31490' => 'bca', 'BcaC06g35344' => 'bca', 'BcaC06g36570' => 'bca', 'BcaC07g37537' => 'bca', 'BcaC08g43491' => 'bca', 'BcaC08g43773' => 'bca', 'BcaNung00234' => 'bca', 'BcaNung01982' => 'bca', 'BcaNung03707' => 'bca', 'BcaNung06454' => 'bca', 'BolC2t10762H' => 'bol', 'BolC2t11191H' => 'bol', 'BolC3t14322H' => 'bol', 'BolC3t19747H' => 'bol', 'BolC3t21425H' => 'bol', 'BolC4t27800H' => 'bol', 'BolC5t31423H' => 'bol', 'BolC6t35951H' => 'bol', 'BolC6t36282H' => 'bol', 'BolC7t40678H' => 'bol', 'BolC7t40679H' => 'bol', 'BolC7t42222H' => 'bol', 'BolC7t43492H' => 'bol', 'BolC7t46785H' => 'bol', 'BolC8t47853H' => 'bol', 'BolC9t56805H' => 'bol', 'BraA02t08000Z' => 'bra', 'BraA02t08341Z' => 'bra', 'BraA03t10936Z' => 'bra', 'BraA03t15657Z' => 'bra', 'BraA04t18100Z' => 'bra', 'BraA05t20523Z' => 'bra', 'BraA06t23353Z' => 'bra', 'BraA06t27473Z' => 'bra', 'BraA06t27769Z' => 'bra', 'BraA07t28928Z' => 'bra', 'BraA08t32236Z' => 'bra', 'BraA08t32841Z' => 'bra', 'BraA08t34524Z' => 'bra', 'BraA09t38742Z' => 'bra', 'BraA09t39295Z' => 'bra', 'C02p47180' => 'bna', 'C02p50990' => 'bna', 'C03p19360' => 'bna', 'C03p74950' => 'bna', 'C03p91000' => 'bna', 'C04p63260' => 'bna', 'C05p27050' => 'bna', 'C06p08750' => 'bna', 'C06p11490' => 'bna', 'C07p02820' => 'bna', 'C07p17180' => 'bna', 'C07p29440' => 'bna', 'C07p63730' => 'bna', 'C09p39260' => 'bna', 'CAN.G1164.34' => 'can', 'CAN.G1164.39' => 'can', 'CAN.G1530.3' => 'can', 'CAN.G162.61' => 'can', 'CAN.G176.6' => 'can', 'CAN.G289.49' => 'can', 'CAN.G370.21' => 'can', 'CAN.G370.22' => 'can', 'CAN.G371.117' => 'can', 'CAN.G58.37' => 'can', 'CAN.G588.98' => 'can', 'CANSAT21G2266' => 'cansat', 'CANSAT25G2799' => 'cansat', 'CANSAT35G0862' => 'cansat', 'CANSAT35G1704' => 'cansat', 'CANSAT35G1760' => 'cansat', 'CANSAT56G3971' => 'cansat', 'CANSAT56G4116' => 'cansat', 'CANSAT80G1259' => 'cansat', 'CARHR027730' => 'chi', 'CARHR033880' => 'chi', 'CARHR043270' => 'chi', 'CARHR145330' => 'chi', 'CARHR145340' => 'chi', 'CARHR175570' => 'chi', 'CARHR181570' => 'chi', 'CARHR258470' => 'chi', 'CARHR260490' => 'chi', 'CARHR294220' => 'chi', 'Carub.0001s2668' => 'cru', 'Carub.0001s3257' => 'cru', 'Carub.0001s4220' => 'cru', 'Carub.0005s0179' => 'cru', 'Carub.0006s2807' => 'cru', 'Carub.0007s0039' => 'cru', 'Carub.0008s0169' => 'cru', 'Carub.0008s0636' => 'cru', 'Ca_00338_v3' => 'car', 'Ca_00542_v3' => 'car', 'Ca_01844_v3' => 'car', 'Ca_10611_v3' => 'car', 'Ca_13326_v3' => 'car', 'Ca_17944_v3' => 'car', 'Ca_18546_v3' => 'car', 'Ca_24219_v3' => 'car', 'Ca_29972_v3' => 'car', 'CBR_g3681' => 'cbr', 'CBR_g40021' => 'cbr', 'Cc01_g08140' => 'ccan', 'Cc02_g13410' => 'ccan', 'Cc02_g37480' => 'ccan', 'Cc05_g12030' => 'ccan', 'Cc09_g03370' => 'ccan', 'Cc09_g10300' => 'ccan', 'Cc10_g03530' => 'ccan', 'Cc10_g11380' => 'ccan', 'CDE01G0176' => 'cde', 'CDE02G0675' => 'cde', 'CDE02G0942' => 'cde', 'CDE02G1153' => 'cde', 'CDE02G4177' => 'cde', 'CDE04G2117' => 'cde', 'CDE04G2736' => 'cde', 'CDE08G1161' => 'cde', 'CDE09G1238' => 'cde', 'Cfa000467' => 'cfa', 'Cfa000947' => 'cfa', 'Cfa004969' => 'cfa', 'Cfa005284' => 'cfa', 'Cfa008993' => 'cfa', 'Cfa018187' => 'cfa', 'Cfa018454' => 'cfa', 'Cfa020585' => 'cfa', 'Ciclev10000424m.g' => 'ccl', 'Ciclev10003605m.g' => 'ccl', 'Ciclev10007828m.g' => 'ccl', 'Ciclev10014620m.g' => 'ccl', 'Ciclev10015169m.g' => 'ccl', 'Ciclev10018291m.g' => 'ccl', 'Ciclev10028256m.g' => 'ccl', 'Ciclev10033822m.g' => 'ccl', 'CiPaw.05G060300' => 'cil', 'CiPaw.05G085000' => 'cil', 'CiPaw.06G083700' => 'cil', 'CiPaw.06G120300' => 'cil', 'CiPaw.09G060500' => 'cil', 'CiPaw.09G123800' => 'cil', 'CiPaw.11G169700' => 'cil', 'CiPaw.12G118300' => 'cil', 'CiPaw.15G071000' => 'cil', 'CiPaw.15G081900' => 'cil', 'ClCG01G024610' => 'cla', 'ClCG03G006070' => 'cla', 'ClCG05G019250' => 'cla', 'ClCG09G009500' => 'cla', 'ClCG11G008200' => 'cla', 'ClCG11G018080' => 'cla', 'COL.COLO4_17373' => 'col', 'COL.COLO4_22994' => 'col', 'COL.COLO4_26389' => 'col', 'COL.COLO4_27170' => 'col', 'COL.COLO4_31074' => 'col', 'COL.COLO4_31465' => 'col', 'COL.COLO4_36438' => 'col', 'COL.COLO4_36439' => 'col', 'Cpa.g.c38781' => 'cpa', 'Cpa.g.sc128.12' => 'cpa', 'Cpa.g.sc166.7' => 'cpa', 'Cpa.g.sc166.8' => 'cpa', 'Cpa.g.sc20.111' => 'cpa', 'Cpa.g.sc27.31' => 'cpa', 'Cpa.g.sc64.36' => 'cpa', 'Cpa.g.sc64.37' => 'cpa', 'Cpa.g.sc66.49' => 'cpa', 'Cpa.g.sc80.64' => 'cpa', 'CsaV3_1G012320' => 'csa', 'CsaV3_2G008480' => 'csa', 'CsaV3_2G033450' => 'csa', 'CsaV3_3G044830' => 'csa', 'CsaV3_4G033710' => 'csa', 'CsaV3_6G051730' => 'csa', 'CsaV3_7G025350' => 'csa', 'CSS0001067' => 'camsi', 'CSS0005996' => 'camsi', 'CSS0006590' => 'camsi', 'CSS0009673' => 'camsi', 'CSS0010201' => 'camsi', 'CSS0010549' => 'camsi', 'CSS0011364' => 'camsi', 'CSS0014473' => 'camsi', 'CSS0014961' => 'camsi', 'CSS0020191' => 'camsi', 'CSS0021165' => 'camsi', 'CSS0022306' => 'camsi', 'CSS0030591' => 'camsi', 'CSS0030696' => 'camsi', 'CSS0032653' => 'camsi', 'CSS0037487' => 'camsi', 'CSS0041102' => 'camsi', 'CSS0041261' => 'camsi', 'CSS0046246' => 'camsi', 'CSS0049256' => 'camsi', 'DCAR_004075' => 'dca', 'DCAR_011538' => 'dca', 'DCAR_019553' => 'dca', 'DCAR_020952' => 'dca', 'DCAR_021739' => 'dca', 'DCAR_027407' => 'dca', 'DCAR_027913' => 'dca', 'DCAR_028066' => 'dca', 'Dinv05899' => 'din', 'Dinv07563' => 'din', 'Dinv08010' => 'din', 'Dinv14125' => 'din', 'Dinv20172' => 'din', 'Dinv30743' => 'din', 'Dinv31229' => 'din', 'Dinv34162' => 'din', 'Dinv36028' => 'din', 'Dinv39368' => 'din', 'Dinv40565' => 'din', 'Dinv41706' => 'din', 'Duzib052G0089' => 'dzi', 'Duzib116G0641' => 'dzi', 'Duzib132G0069' => 'dzi', 'Duzib132G1219' => 'dzi', 'Duzib147G0278' => 'dzi', 'Duzib160G0480' => 'dzi', 'Duzib170G0661' => 'dzi', 'Duzib177G0591' => 'dzi', 'Duzib187G1353' => 'dzi', 'Duzib192G0858' => 'dzi', 'Duzib192G0883' => 'dzi', 'Duzib213G0506' => 'dzi', 'Duzib235G0289' => 'dzi', 'Duzib251G0422' => 'dzi', 'ECA232G3898' => 'eca', 'ECA233G5950' => 'eca', 'ECA234G1699' => 'eca', 'ECA234G2421' => 'eca', 'ECA236G0426' => 'eca', 'ECA236G4331' => 'eca', 'ECA248G2573' => 'eca', 'EL10Ac1g00077' => 'bvu', 'EL10Ac1g01746' => 'bvu', 'EL10Ac2g03464' => 'bvu', 'EL10Ac4g08176' => 'bvu', 'EL10Ac7g17521' => 'bvu', 'EL10Ac8g20386' => 'bvu', 'EL10Ac9g21343' => 'bvu', 'EL10Ac9g22688' => 'bvu', 'Eucgr.B03434' => 'egr', 'Eucgr.D00618' => 'egr', 'Eucgr.E02395' => 'egr', 'Eucgr.F01129' => 'egr', 'Eucgr.F02622' => 'egr', 'Eucgr.F04207' => 'egr', 'FAN01G0570' => 'fan', 'FAN03G3351' => 'fan', 'FAN06G3702' => 'fan', 'FAN07G2149' => 'fan', 'FAN10G3758' => 'fan', 'FAN11G1170' => 'fan', 'FAN11G2050' => 'fan', 'FAN11G2724' => 'fan', 'FAN12G1700' => 'fan', 'FAN12G2028' => 'fan', 'FAN15G1160' => 'fan', 'FAN15G3063' => 'fan', 'FAN16G2540' => 'fan', 'FAN16G3077' => 'fan', 'FAN16G3624' => 'fan', 'FAN17G0221' => 'fan', 'FAN20G2492' => 'fan', 'FAN20G2905' => 'fan', 'FAN21G0548' => 'fan', 'FAN21G1300' => 'fan', 'FAN22G0077' => 'fan', 'FAN22G1315' => 'fan', 'FAN24G1280' => 'fan', 'FAN24G1445' => 'fan', 'FAN24G3527' => 'fan', 'FAN25G0464' => 'fan', 'FAN25G2885' => 'fan', 'FAN25G3270' => 'fan', 'FAN27G1101' => 'fan', 'FAN27G2846' => 'fan', 'FAN27G3524' => 'fan', 'FvH4_2g11770' => 'fve', 'FvH4_2g15630' => 'fve', 'FvH4_3g05570' => 'fve', 'FvH4_3g09110' => 'fve', 'FvH4_3g19940' => 'fve', 'FvH4_4g04821' => 'fve', 'FvH4_4g31480' => 'fve', 'FvH4_7g01740' => 'fve', 'Glyma.05G130400' => 'gma', 'Glyma.05G156400' => 'gma', 'Glyma.07G197000' => 'gma', 'Glyma.08G085151' => 'gma', 'Glyma.08G114500' => 'gma', 'Glyma.08G300400' => 'gma', 'Glyma.10G215800' => 'gma', 'Glyma.12G224400' => 'gma', 'Glyma.13G179300' => 'gma', 'Glyma.13G218151' => 'gma', 'Glyma.13G238800' => 'gma', 'Glyma.13G276900' => 'gma', 'Glyma.14G078200' => 'gma', 'Glyma.15G074500' => 'gma', 'Glyma.15G094100' => 'gma', 'Glyma.17G247200' => 'gma', 'Glyma.18G120100' => 'gma', 'Glyma.20G176000' => 'gma', 'Gohir.A01G063600' => 'ghi', 'Gohir.A01G170301' => 'ghi', 'Gohir.A02G060500' => 'ghi', 'Gohir.A05G133850' => 'ghi', 'Gohir.A05G161400' => 'ghi', 'Gohir.A06G012900' => 'ghi', 'Gohir.A06G035901' => 'ghi', 'Gohir.A06G127100' => 'ghi', 'Gohir.A06G210500' => 'ghi', 'Gohir.A08G008650' => 'ghi', 'Gohir.A09G072700' => 'ghi', 'Gohir.A09G088301' => 'ghi', 'Gohir.A10G040600' => 'ghi', 'Gohir.A12G036300' => 'ghi', 'Gohir.A12G143350' => 'ghi', 'Gohir.A12G165500' => 'ghi', 'Gohir.A13G145700' => 'ghi', 'Gohir.D01G050000' => 'ghi', 'Gohir.D01G051366' => 'ghi', 'Gohir.D01G161350' => 'ghi', 'Gohir.D02G065900' => 'ghi', 'Gohir.D05G164200' => 'ghi', 'Gohir.D05G355500' => 'ghi', 'Gohir.D06G010400' => 'ghi', 'Gohir.D06G111250' => 'ghi', 'Gohir.D06G132000' => 'ghi', 'Gohir.D06G210500' => 'ghi', 'Gohir.D07G165675' => 'ghi', 'Gohir.D08G062240' => 'ghi', 'Gohir.D08G086101' => 'ghi', 'Gohir.D08G138060' => 'ghi', 'Gohir.D09G072300' => 'ghi', 'Gohir.D10G041400' => 'ghi', 'Gohir.D11G191020' => 'ghi', 'Gohir.D11G212066' => 'ghi', 'Gohir.D12G036300' => 'ghi', 'Gohir.D12G168600' => 'ghi', 'Gohir.D13G150600' => 'ghi', 'Gorai.001G057300' => 'gra', 'Gorai.002G069900' => 'gra', 'Gorai.002G200000' => 'gra', 'Gorai.003G067600' => 'gra', 'Gorai.005G074800' => 'gra', 'Gorai.006G087300' => 'gra', 'Gorai.008G037500' => 'gra', 'Gorai.008G181400' => 'gra', 'Gorai.009G169400' => 'gra', 'Gorai.009G387900' => 'gra', 'Gorai.010G013300' => 'gra', 'Gorai.010G153800' => 'gra', 'Gorai.010G255800' => 'gra', 'Gorai.011G043700' => 'gra', 'Gorai.011G198900' => 'gra', 'Gorai.013G168400' => 'gra', 'GSVIVG01005212001' => 'vvi', 'GSVIVG01006163001' => 'vvi', 'GSVIVG01009625001' => 'vvi', 'GSVIVG01014338001' => 'vvi', 'GSVIVG01020005001' => 'vvi', 'GSVIVG01021450001' => 'vvi', 'GSVIVG01023975001' => 'vvi', 'GSVIVG01034490001' => 'vvi', 'HanXRQChr04g0112071' => 'han', 'HanXRQChr05g0131151' => 'han', 'HanXRQChr09g0262371' => 'han', 'HanXRQChr09g0268401' => 'han', 'HanXRQChr10g0279241' => 'han', 'HanXRQChr10g0297961' => 'han', 'HanXRQChr11g0326231' => 'han', 'HanXRQChr11g0328471' => 'han', 'HanXRQChr16g0507941' => 'han', 'HanXRQChr17g0560211' => 'han', 'Haze_02108' => 'cav', 'Haze_02428' => 'cav', 'Haze_05593' => 'cav', 'Haze_06448' => 'cav', 'Haze_09427' => 'cav', 'Haze_12022' => 'cav', 'Haze_17612' => 'cav', 'Haze_17928' => 'cav', 'Hma1.2p1_0032F.1_g019250' => 'hma', 'Hma1.2p1_0163F.1_g072690' => 'hma', 'Hma1.2p1_0265F.1_g106710' => 'hma', 'Hma1.2p1_0286F.1_g113970' => 'hma', 'Hma1.2p1_0363F.1_g136640' => 'hma', 'Hma1.2p1_0584F.1_g183470' => 'hma', 'Hma1.2p1_0885F.1_g232570' => 'hma', 'HPP92_006022' => 'vpl', 'HPP92_007320' => 'vpl', 'HPP92_011521' => 'vpl', 'HPP92_019387' => 'vpl', 'HPP92_024038' => 'vpl', 'Hund05891' => 'sun', 'Hund06450' => 'sun', 'Hund12053' => 'sun', 'Hund16800' => 'sun', 'Hund21222' => 'sun', 'Hund22896' => 'sun', 'Hund23746' => 'sun', 'Hund27083' => 'sun', 'Lalb_Chr02g0141831' => 'lal', 'Lalb_Chr02g0141841' => 'lal', 'Lalb_Chr05g0220411' => 'lal', 'Lalb_Chr06g0162081' => 'lal', 'Lalb_Chr09g0327651' => 'lal', 'Lalb_Chr13g0295051' => 'lal', 'Lalb_Chr15g0086801' => 'lal', 'Lalb_Chr16g0383781' => 'lal', 'Lalb_Chr16g0383791' => 'lal', 'Lalb_Chr18g0055441' => 'lal', 'Lalb_Chr18g0059611' => 'lal', 'Lalb_Chr20g0109661' => 'lal', 'Lalb_Chr20g0109831' => 'lal', 'Lalb_Chr20g0121871' => 'lal', 'Lalb_Chr22g0355361' => 'lal', 'Lalb_Chr25g0286371' => 'lal', 'Lj1A1187G43' => 'lonja', 'Lj1A1205T50' => 'lonja', 'Lj1A800G33' => 'lonja', 'Lj1C1187T7' => 'lonja', 'Lj1C843T11' => 'lonja', 'Lj1g0010940' => 'lja', 'Lj2A288T69' => 'lonja', 'Lj3g0024276' => 'lja', 'Lj4A47T76' => 'lonja', 'Lj4g0005805' => 'lja', 'Lj4g0006097' => 'lja', 'Lj4g0008528' => 'lja', 'Lj4g0024907' => 'lja', 'Lj5g0012472' => 'lja', 'Lj5g0018648' => 'lja', 'Lj6C789G1' => 'lonja', 'Lj6g0004000' => 'lja', 'Lj7A292G67' => 'lonja', 'Lj7A292T64' => 'lonja', 'Lj9A400T58' => 'lonja', 'Lsat_1_v5_gn_1_126181' => 'lsa', 'Lsat_1_v5_gn_4_123041' => 'lsa', 'Lsat_1_v5_gn_4_133620' => 'lsa', 'Lsat_1_v5_gn_4_53221' => 'lsa', 'Lsat_1_v5_gn_4_71961' => 'lsa', 'Lsat_1_v5_gn_7_105241' => 'lsa', 'Lsat_1_v5_gn_7_21361' => 'lsa', 'Lsat_1_v5_gn_7_28860' => 'lsa', 'Lsat_1_v5_gn_7_31260' => 'lsa', 'Lsat_1_v5_gn_8_52801' => 'lsa', 'Manes.02G191400' => 'mes', 'Manes.03G110100' => 'mes', 'Manes.04G071100' => 'mes', 'Manes.05G100500' => 'mes', 'Manes.05G164700' => 'mes', 'Manes.15G087000' => 'mes', 'Manes.15G121500' => 'mes', 'Manes.16G028300' => 'mes', 'Manes.17G046100' => 'mes', 'Manes.17G069800' => 'mes', 'Manes.18G100500' => 'mes', 'Mapoly0002s0109' => 'mpo', 'Mapoly0024s0007' => 'mpo', 'Mapoly0089s0032' => 'mpo', 'MBI04_g42241_MAGBIO' => 'mbi', 'MBI05_g11988_MAGBIO' => 'mbi', 'MBI05_g35452_MAGBIO' => 'mbi', 'MBI07_g30179_MAGBIO' => 'mbi', 'MBI07_g35859_MAGBIO' => 'mbi', 'MBI07_g35860_MAGBIO' => 'mbi', 'MBI07_g37166_MAGBIO' => 'mbi', 'MBI08_g18172_MAGBIO' => 'mbi', 'MBI09_g08441_MAGBIO' => 'mbi', 'MBI13_g01676_MAGBIO' => 'mbi', 'MBI14_g42955_MAGBIO' => 'mbi', 'MBI16_g13161_MAGBIO' => 'mbi', 'MBI17_g27204_MAGBIO' => 'mbi', 'MBI19_g21595_MAGBIO' => 'mbi', 'MD00G1148400' => 'mdo', 'MD02G1301200' => 'mdo', 'MD03G1227800' => 'mdo', 'MD05G1041100' => 'mdo', 'MD05G1124800' => 'mdo', 'MD05G1284000' => 'mdo', 'MD05G1338800' => 'mdo', 'MD05G1338900' => 'mdo', 'MD07G1022800' => 'mdo', 'MD10G1047500' => 'mdo', 'MD10G1127500' => 'mdo', 'MD10G1262300' => 'mdo', 'MD10G1293800' => 'mdo', 'MD16G1074300' => 'mdo', 'Medtr1g021670' => 'mtr', 'Medtr1g096320' => 'mtr', 'Medtr2g013690' => 'mtr', 'Medtr2g019450' => 'mtr', 'Medtr2g085170' => 'mtr', 'Medtr4g088785' => 'mtr', 'Medtr8g055930' => 'mtr', 'Medtr8g085850' => 'mtr', 'MELO3C002605.2' => 'cme', 'MELO3C003891.2' => 'cme', 'MELO3C004012.2' => 'cme', 'MELO3C007134.2' => 'cme', 'MELO3C008118.2' => 'cme', 'MELO3C016700.2' => 'cme', 'MELO3C024127.2' => 'cme', 'MELO3C033361.2' => 'cme', 'MELO3C033362.2' => 'cme', 'Migut.C00430' => 'egut', 'Migut.C01246' => 'egut', 'Migut.E00101' => 'egut', 'Migut.H01486' => 'egut', 'Migut.H01939' => 'egut', 'Migut.K00360' => 'egut', 'Migut.M00910' => 'egut', 'Migut.M01139' => 'egut', 'Migut.N02677' => 'egut', 'MSTRG.13252' => 'ama', 'MSTRG.14701' => 'ama', 'MSTRG.1521' => 'ama', 'MSTRG.15884' => 'ama', 'MSTRG.16242' => 'ama', 'MSTRG.22285' => 'ama', 'MSTRG.22444' => 'ama', 'MSTRG.2349' => 'ama', 'MSTRG.26308' => 'ama', 'MSTRG.28296' => 'ama', 'MSTRG.9895' => 'ama', 'Nitab4.5_0000110g0060' => 'nta', 'Nitab4.5_0000420g0130' => 'nta', 'Nitab4.5_0000422g0030' => 'nta', 'Nitab4.5_0000560g0180' => 'nta', 'Nitab4.5_0000703g0100' => 'nta', 'Nitab4.5_0000786g0200' => 'nta', 'Nitab4.5_0001336g0020' => 'nta', 'Nitab4.5_0001796g0030' => 'nta', 'Nitab4.5_0003348g0060' => 'nta', 'Nitab4.5_0003698g0040' => 'nta', 'Nitab4.5_0003942g0090' => 'nta', 'Nitab4.5_0004775g0070' => 'nta', 'Nitab4.5_0004864g0030' => 'nta', 'Nitab4.5_0005615g0020' => 'nta', 'Nitab4.5_0009288g0030' => 'nta', 'Nitab4.5_0009341g0010' => 'nta', 'Nitab4.5_0009535g0010' => 'nta', 'Nn1g03995' => 'nnu', 'Nn1g04100' => 'nnu', 'Nn1g06530' => 'nnu', 'Nn3g16404' => 'nnu', 'Nn3g17212' => 'nnu', 'Nn3g20776' => 'nnu', 'Nn3g21923' => 'nnu', 'Nn5g27737' => 'nnu', 'Nn5g29461' => 'nnu', 'Nn7g38355' => 'nnu', 'Nn8g39873' => 'nnu', 'Oeu000548.2' => 'oeu', 'Oeu004672.1' => 'oeu', 'Oeu015605.2' => 'oeu', 'Oeu016092.1' => 'oeu', 'Oeu017879.3' => 'oeu', 'Oeu024910.1' => 'oeu', 'Oeu028965.1' => 'oeu', 'Oeu031269.1' => 'oeu', 'Oeu031270.1' => 'oeu', 'Oeu032535.1' => 'oeu', 'Oeu034151.1' => 'oeu', 'Oeu034152.1' => 'oeu', 'Oeu034588.2' => 'oeu', 'Oeu050846.1' => 'oeu', 'Oeu050849.2' => 'oeu', 'Oeu051063.2' => 'oeu', 'Oeu052368.1' => 'oeu', 'Oeu052370.1' => 'oeu', 'Os01g0210400' => 'osa', 'Os01g0304300' => 'osa', 'Os01g0749100' => 'osa', 'Os02g0745800' => 'osa', 'Os03g0769050' => 'osa', 'Os05g0531500' => 'osa', 'Os06g0724300' => 'osa', 'Os11g0198100' => 'osa', 'Peaxi162Scf00069g01425' => 'pax', 'Peaxi162Scf00280g00811' => 'pax', 'Peaxi162Scf00310g00615' => 'pax', 'Peaxi162Scf00362g00542' => 'pax', 'Peaxi162Scf00461g00310' => 'pax', 'Peaxi162Scf00530g00118' => 'pax', 'Peaxi162Scf00541g00057' => 'pax', 'Peaxi162Scf00661g00017' => 'pax', 'Peaxi162Scf00926g00027' => 'pax', 'Peaxi162Scf01064g00263' => 'pax', 'Peaxi162Scf01211g00135' => 'pax', 'PGR004G2336' => 'pgr', 'PGR042G0327' => 'pgr', 'PGR042G1957' => 'pgr', 'PGR042G2003' => 'pgr', 'PGR042G3929' => 'pgr', 'PGR083G1137' => 'pgr', 'PGR083G1364' => 'pgr', 'PGSC0003DMG400003381' => 'stu', 'PGSC0003DMG400003417' => 'stu', 'PGSC0003DMG400008981' => 'stu', 'PGSC0003DMG400012417' => 'stu', 'PGSC0003DMG400012823' => 'stu', 'PGSC0003DMG400016885' => 'stu', 'PGSC0003DMG400022812' => 'stu', 'PGSC0003DMG400029726' => 'stu', 'PGSC0003DMG401009243' => 'stu', 'PGSC0003DMG401031505' => 'stu', 'PGSC0003DMG402031505' => 'stu', 'Phvul.001G017600' => 'pvu', 'Phvul.002G193500' => 'pvu', 'Phvul.002G228900' => 'pvu', 'Phvul.002G236800' => 'pvu', 'Phvul.003G049500' => 'pvu', 'Phvul.005G072000' => 'pvu', 'Phvul.006G164800' => 'pvu', 'Phvul.006G185100' => 'pvu', 'Phvul.007G090000' => 'pvu', 'Potri.001G399800' => 'ptr', 'Potri.002G149900' => 'ptr', 'Potri.004G044100' => 'ptr', 'Potri.004G177600' => 'ptr', 'Potri.009G138000' => 'ptr', 'Potri.010G094000' => 'ptr', 'Potri.011G053000' => 'ptr', 'Potri.011G119300' => 'ptr', 'Potri.013G113700' => 'ptr', 'Potri.018G107800' => 'ptr', 'Potri.019G084100' => 'ptr', 'Pp3c14_23720' => 'ppa', 'Pp3c16_6340' => 'ppa', 'Pp3c23_13420' => 'ppa', 'Pp3c24_2740' => 'ppa', 'Pp3c25_860' => 'ppa', 'Pp3c8_21750' => 'ppa', 'Prupe.1G273000' => 'ppe', 'Prupe.1G273700' => 'ppe', 'Prupe.1G274100' => 'ppe', 'Prupe.2G023300' => 'ppe', 'Prupe.4G048000' => 'ppe', 'Prupe.4G080400' => 'ppe', 'Prupe.4G181200' => 'ppe', 'Prupe.8G056900' => 'ppe', 'Prupe.8G168700' => 'ppe', 'Psat1g189080' => 'psa', 'Psat1g204760' => 'psa', 'Psat4g175560' => 'psa', 'Psat4g177720' => 'psa', 'Psat5g244240' => 'psa', 'Psat6g010720' => 'psa', 'Psat6g187200' => 'psa', 'Psat7g072040' => 'psa', 'PSO017G3501' => 'pso', 'PSO063G2148' => 'pso', 'PSO063G5608' => 'pso', 'PSO210G6392' => 'pso', 'PSO541G2319' => 'pso', 'PSO541G2836' => 'pso', 'PSO541G4012' => 'pso', 'PSO541G6253' => 'pso', 'PSO675G0580' => 'pso', 'PSO675G0856' => 'pso', 'PSO675G5635' => 'pso', 'PSO675G9157' => 'pso', 'PSO832G1660' => 'pso', 'PSO832G1969' => 'pso', 'QL02p007186' => 'qlo', 'QL02p033904' => 'qlo', 'QL03p064391' => 'qlo', 'QL05p040593' => 'qlo', 'QL05p058242' => 'qlo', 'QL08p021825' => 'qlo', 'QL11p004981' => 'qlo', 'RcHm_v2.0_Chr1g0318301' => 'rch', 'RcHm_v2.0_Chr4g0418501' => 'rch', 'RcHm_v2.0_Chr4g0439971' => 'rch', 'RcHm_v2.0_Chr5g0008541' => 'rch', 'RcHm_v2.0_Chr5g0014101' => 'rch', 'RcHm_v2.0_Chr5g0014131' => 'rch', 'RcHm_v2.0_Chr5g0033621' => 'rch', 'RcHm_v2.0_Chr6g0272041' => 'rch', 'RcHm_v2.0_Chr6g0278831' => 'rch', 'Rhsim02G0130400' => 'rsi', 'Rhsim02G0171100' => 'rsi', 'Rhsim05G0053000' => 'rsi', 'Rhsim05G0053100' => 'rsi', 'Rhsim06G0096500' => 'rsi', 'Rhsim06G0096600' => 'rsi', 'Rhsim06G0199100' => 'rsi', 'Rhsim12G0062300' => 'rsi', 'Rhsim12G0062800' => 'rsi', 'Sabra02G0118600' => 'sbr', 'Sabra04G0027300' => 'sbr', 'Sabra04G0119500' => 'sbr', 'Sabra08G0112500' => 'sbr', 'Sabra11G0036800' => 'sbr', 'Sabra11G0103800' => 'sbr', 'Sabra13G0096300' => 'sbr', 'Sabra16G0262300' => 'sbr', 'Sabra18G0091700' => 'sbr', 'Sabra19G0095400' => 'sbr', 'SalBow6G3080' => 'sbo', 'SalBow7G1157' => 'sbo', 'SalBow7G2123' => 'sbo', 'SalBow7G2285' => 'sbo', 'SalBow7G3537' => 'sbo', 'SalBow8G2947' => 'sbo', 'SalBow8G4463' => 'sbo', 'SalBow8G5466' => 'sbo', 'Sc01g0001750' => 'sci', 'Sc02g0006640' => 'sci', 'Sc02g0006670' => 'sci', 'Sc04g0008220' => 'sci', 'Sc05g0006190' => 'sci', 'Sc08g0002760' => 'sci', 'Sc17g0006170' => 'sci', 'Sc22g0002050' => 'sci', 'Sc23g0001190' => 'sci', 'Sc24g0000980' => 'sci', 'Sed0006245' => 'sed', 'Sed0007543' => 'sed', 'Sed0009411' => 'sed', 'Sed0010765' => 'sed', 'Sed0012944' => 'sed', 'Sed0014682' => 'sed', 'Sed0016174' => 'sed', 'Sed0016796' => 'sed', 'Sed0020317' => 'sed', 'Sed0021467' => 'sed', 'SEGI_01316' => 'sgi', 'SEGI_03374' => 'sgi', 'SEGI_16265' => 'sgi', 'SEGI_18569' => 'sgi', 'SEGI_20351' => 'sgi', 'SEGI_26395' => 'sgi', 'SEGI_29469' => 'sgi', 'SEGI_34771' => 'sgi', 'SEGI_36769' => 'sgi', 'SEGI_37139' => 'sgi', 'SGA_v2.0_scaffold100G29687' => 'sas', 'SGA_v2.0_scaffold118G32472' => 'sas', 'SGA_v2.0_scaffold14G07051' => 'sas', 'SGA_v2.0_scaffold183G39845' => 'sas', 'SGA_v2.0_scaffold1G00174' => 'sas', 'SGA_v2.0_scaffold22G09714' => 'sas', 'SGA_v2.0_scaffold333G48992' => 'sas', 'SGA_v2.0_scaffold46G17491' => 'sas', 'SGA_v2.0_scaffold49G18294' => 'sas', 'SGA_v2.0_scaffold63G21658' => 'sas', 'SHI01741' => 'shi', 'SHI05771' => 'shi', 'SHI18077' => 'shi', 'SHI20525' => 'shi', 'SHI20527' => 'shi', 'SHI20528' => 'shi', 'SMO172G0185' => 'smo', 'SMO198G0020' => 'smo', 'SMO351G0006' => 'smo', 'SMO356G0118' => 'smo', 'SMO358G0296' => 'smo', 'SMO367G0079' => 'smo', 'SMO367G1277' => 'smo', 'Solyc01g014220.3' => 'sly', 'Solyc01g111770.2' => 'sly', 'Solyc02g078180.3' => 'sly', 'Solyc03g006430.3' => 'sly', 'Solyc03g006456.1' => 'sly', 'Solyc03g079860.2' => 'sly', 'Solyc04g079770.3' => 'sly', 'Solyc05g007430.4' => 'sly', 'Solyc07g063150.3' => 'sly', 'Solyc08g016620.3' => 'sly', 'Solyc09g057590.3' => 'sly', 'Solyc09g057600.1' => 'sly', 'Solyc10g009050.3' => 'sly', 'Solyc11g017420.2' => 'sly', 'Sopen01g053810' => 'spe', 'Sopen02g023040' => 'spe', 'Sopen03g002440' => 'spe', 'Sopen04g033350' => 'spe', 'Sopen05g003310' => 'spe', 'Sopen07g004050' => 'spe', 'Sopen07g031340' => 'spe', 'Sopen08g006990' => 'spe', 'Sopen10g004830' => 'spe', 'Sopen11g009370' => 'spe', 'Sp1g24450' => 'spa', 'Sp1g29670' => 'spa', 'Sp1g39600' => 'spa', 'Sp2g11080' => 'spa', 'Sp2g13970' => 'spa', 'Sp4g16130' => 'spa', 'Sp6g13080' => 'spa', 'Sp7g37270' => 'spa', 'TAR371G0065' => 'tar', 'TAR376G0340' => 'tar', 'TAR376G0435' => 'tar', 'TAR381G0002' => 'tar', 'TAR381G1236' => 'tar', 'TAR624G0055' => 'tar', 'TAR624G0324' => 'tar', 'TAR624G0696' => 'tar', 'TAR624G0906' => 'tar', 'TAR625G0107' => 'tar', 'TAR626G0015' => 'tar', 'TAR626G1356' => 'tar', 'TAR627G0888' => 'tar', 'TAR628G0399' => 'tar', 'TAR628G1327' => 'tar', 'TAR629G2831' => 'tar', 'TAR629G2874' => 'tar', 'TAR633G1432' => 'tar', 'TAR633G2771' => 'tar', 'THA.LOC104803394' => 'tha', 'THA.LOC104805153' => 'tha', 'THA.LOC104806784' => 'tha', 'THA.LOC104810473' => 'tha', 'THA.LOC104813100' => 'tha', 'THA.LOC104814215' => 'tha', 'THA.LOC104815554' => 'tha', 'THA.LOC104820544' => 'tha', 'THA.LOC104824754' => 'tha', 'THA.LOC104827717' => 'tha', 'Thecc.02G031400' => 'tca', 'Thecc.02G055900' => 'tca', 'Thecc.02G350800' => 'tca', 'Thecc.06G150900' => 'tca', 'Thecc.06G186600' => 'tca', 'Thecc.07G089600' => 'tca', 'Thecc.08G020400' => 'tca', 'Thecc.08G182100' => 'tca', 'Thhalv10000873m.g' => 'esa', 'Thhalv10004185m.g' => 'esa', 'Thhalv10006981m.g' => 'esa', 'Thhalv10007204m.g' => 'esa', 'Thhalv10011374m.g' => 'esa', 'Thhalv10013482m.g' => 'esa', 'Thhalv10017801m.g' => 'esa', 'Thhalv10024983m.g' => 'esa', 'TPR.G12072' => 'tpr', 'TPR.G15769' => 'tpr', 'TPR.G16504' => 'tpr', 'TPR.G16506' => 'tpr', 'TPR.G24345' => 'tpr', 'TPR.G26666' => 'tpr', 'TPR.G27320' => 'tpr', 'TPR.G31819' => 'tpr', 'TPR.G38879' => 'tpr', 'TPR.G39015' => 'tpr', 'TPR.G8819' => 'tpr', 'TWI09G0924' => 'twi', 'TWI12G0811' => 'twi', 'TWI12G1294' => 'twi', 'TWI31G0150' => 'twi', 'TWI36G1262' => 'twi', 'TWI38G1287' => 'twi', 'TWI38G1633' => 'twi', 'TWI38G1982' => 'twi', 'TWI39G0116' => 'twi', 'TWI60G1011' => 'twi', 'TWI63G0171' => 'twi', 'TWI73G0839' => 'twi', 'TWI79G1511' => 'twi', 'unitig_0.g915' => 'ugi', 'unitig_0.g916' => 'ugi', 'unitig_21.g20219' => 'ugi', 'unitig_21.g20416' => 'ugi', 'unitig_578.g16132' => 'ugi', 'unitig_578.g16718' => 'ugi', 'unitig_62.g23481' => 'ugi', 'unitig_744.g24535' => 'ugi', 'unitig_749.g13525' => 'ugi', 'vmacro01248' => 'vma', 'vmacro02290' => 'vma', 'vmacro10946' => 'vma', 'vmacro11865' => 'vma', 'vmacro12493' => 'vma', 'vmacro17322' => 'vma', 'vmacro21599' => 'vma', 'vmacro23041' => 'vma', 'VMungo0251G0004' => 'vmu', 'VMungo0251G2639' => 'vmu', 'VMungo0251G2967' => 'vmu', 'VMungo0540G0864' => 'vmu', 'VMungo0540G1569' => 'vmu', 'VMungo0647G0317' => 'vmu', 'VMungo0720G1373' => 'vmu', 'VMungo0720G1508' => 'vmu', 'VMungo1080G0485' => 'vmu', 'VMungo1215G3177' => 'vmu', 'Zm00001eb112600' => 'zma', 'Zm00001eb120220' => 'zma', 'Zm00001eb153240' => 'zma', 'Zm00001eb168880' => 'zma', 'Zm00001eb213920' => 'zma', 'Zm00001eb228280' => 'zma', 'Zm00001eb254580' => 'zma', 'Zm00001eb272180' => 'zma', 'Zm00001eb293190' => 'zma', 'Zm00001eb322930' => 'zma', 'Zm00001eb353360' => 'zma', 'Zm00001eb353390' => 'zma', 'Zm00001eb353430' => 'zma', 'Zm00001eb353440' => 'zma', 'Zm00001eb353780' => 'zma' ), 'gf_id' => 'HOM05D000499', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000499' ), 'data_identifier' => 'HOM05D000499', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000499', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1066', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p29780' => 'bna', 'A02p33180' => 'bna', 'A03p16470' => 'bna', 'A03p66010' => 'bna', 'A04p25970' => 'bna', 'A06p01270' => 'bna', 'A06p46080' => 'bna', 'A07p11400' => 'bna', 'A08p01840' => 'bna', 'A08p08230' => 'bna', 'A08p25740' => 'bna', 'A09p32070' => 'bna', 'A09p37830' => 'bna', 'A09p42840' => 'bna', 'A09p42850' => 'bna', 'Aa31LG10G2060' => 'aar', 'Aa31LG2G7410' => 'aar', 'Aa31LG6G10200' => 'aar', 'Aa31LG6G16680' => 'aar', 'Aa31LG6G8470' => 'aar', 'Aa31LG9G12730' => 'aar', 'Aa31LG9G13680' => 'aar', 'Aa31LG9G14920' => 'aar', 'Aa31LG9G6650' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4977' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5467' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3254' => 'aag', 'Actinidia02578' => 'ach', 'Actinidia07693' => 'ach', 'Actinidia08413' => 'ach', 'Actinidia08414' => 'ach', 'Actinidia15289' => 'ach', 'Actinidia19871' => 'ach', 'Actinidia21475' => 'ach', 'Actinidia22576' => 'ach', 'Actinidia28327' => 'ach', 'Actinidia32491' => 'ach', 'Actinidia39463' => 'ach', 'Actinidia39571' => 'ach', 'Ah.01g013750' => 'amhyb', 'Ah.01g023210' => 'amhyb', 'Ah.04g164850' => 'amhyb', 'Ah.05g178060' => 'amhyb', 'Ah.07g204270' => 'amhyb', 'Ah.07g208480' => 'amhyb', 'Ah.09g237410' => 'amhyb', 'Ah.14g089460' => 'amhyb', 'AL1G41790' => 'aly', 'AL1G49050' => 'aly', 'AL1G53810' => 'aly', 'AL1G61400' => 'aly', 'AL4G18580' => 'aly', 'AL5G12510' => 'aly', 'AL5G12540' => 'aly', 'AL6G43230' => 'aly', 'AL7G10370' => 'aly', 'AL7G19250' => 'aly', 'AL8G12240' => 'aly', 'AL8G18540' => 'aly', 'Aqoxy1G02409' => 'aox', 'Aqoxy2G03993' => 'aox', 'Aqoxy3G03357' => 'aox', 'Aqoxy4G00785' => 'aox', 'Aqoxy5G02598' => 'aox', 'Aqoxy6G00132' => 'aox', 'Aqoxy7G01776' => 'aox', 'Aqoxy7G02316' => 'aox', 'Aqoxy7G03973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.12AFKW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B8730' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27IQR1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3F75VG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3RE0GA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41TCQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.527VTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FIR39' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5W8UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DA38EV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ63HS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H1I32C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HC27T5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4M8AP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7N3CZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9UVDZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LS1NQA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT1D4B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SKC4TM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCFV76' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF9Q1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQWD9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1ZM88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WE07RT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YCK7VH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJE6Q6' => 'arhy', 'AT1G28240' => 'ath', 'AT1G34550' => 'ath', 'AT1G53040' => 'ath', 'AT2G02910' => 'ath', 'AT4G09630' => 'ath', 'AT4G38500' => 'ath', 'AT5G42660' => 'ath', 'AT5G46220' => 'ath', 'ATR0152G026' => 'atr', 'ATR0564G343' => 'atr', 'ATR0706G151' => 'atr', 'ATR0733G207' => 'atr', 'ATR0751G234' => 'atr', 'ATR0807G048' => 'atr', 'ATR1091G084' => 'atr', 'Atru.chr10.1229' => 'acertr', 'Atru.chr10.1230' => 'acertr', 'Atru.chr10.1874' => 'acertr', 'Atru.chr11.1808' => 'acertr', 'Atru.chr13.1795' => 'acertr', 'Atru.chr13.570' => 'acertr', 'Atru.chr2.2608' => 'acertr', 'Atru.chr2.2609' => 'acertr', 'Atru.chr5.3428' => 'acertr', 'Atru.chr8.1171' => 'acertr', 'AUR62004651' => 'cqu', 'AUR62008675' => 'cqu', 'AUR62010014' => 'cqu', 'AUR62013004' => 'cqu', 'AUR62014825' => 'cqu', 'AUR62015015' => 'cqu', 'AUR62015151' => 'cqu', 'AUR62017020' => 'cqu', 'AUR62019422' => 'cqu', 'AUR62023570' => 'cqu', 'AUR62025571' => 'cqu', 'AUR62029098' => 'cqu', 'AUR62033863' => 'cqu', 'AUR62034296' => 'cqu', 'AUR62040075' => 'cqu', 'BcaB02g07334' => 'bca', 'BcaB02g10575' => 'bca', 'BcaB03g12119' => 'bca', 'BcaB03g12120' => 'bca', 'BcaB03g13945' => 'bca', 'BcaB04g17123' => 'bca', 'BcaB04g17867' => 'bca', 'BcaB04g19839' => 'bca', 'BcaB07g30317' => 'bca', 'BcaB07g32432' => 'bca', 'BcaB07g33362' => 'bca', 'BcaB08g36611' => 'bca', 'BcaC01g00028' => 'bca', 'BcaC01g01356' => 'bca', 'BcaC01g02034' => 'bca', 'BcaC01g06051' => 'bca', 'BcaC03g16839' => 'bca', 'BcaC03g17176' => 'bca', 'BcaC05g26829' => 'bca', 'BcaC06g31490' => 'bca', 'BcaC06g35344' => 'bca', 'BcaC06g36570' => 'bca', 'BcaC07g37537' => 'bca', 'BcaC08g43491' => 'bca', 'BcaC08g43773' => 'bca', 'BcaNung00234' => 'bca', 'BcaNung01982' => 'bca', 'BcaNung03707' => 'bca', 'BcaNung06454' => 'bca', 'BolC2t10762H' => 'bol', 'BolC2t11191H' => 'bol', 'BolC3t14322H' => 'bol', 'BolC3t19747H' => 'bol', 'BolC3t21425H' => 'bol', 'BolC4t27800H' => 'bol', 'BolC5t31423H' => 'bol', 'BolC6t35951H' => 'bol', 'BolC6t36282H' => 'bol', 'BolC7t40678H' => 'bol', 'BolC7t40679H' => 'bol', 'BolC7t42222H' => 'bol', 'BolC7t43492H' => 'bol', 'BolC7t46785H' => 'bol', 'BolC8t47853H' => 'bol', 'BolC9t56805H' => 'bol', 'BraA02t08000Z' => 'bra', 'BraA02t08341Z' => 'bra', 'BraA03t10936Z' => 'bra', 'BraA03t15657Z' => 'bra', 'BraA04t18100Z' => 'bra', 'BraA05t20523Z' => 'bra', 'BraA06t23353Z' => 'bra', 'BraA06t27473Z' => 'bra', 'BraA06t27769Z' => 'bra', 'BraA07t28928Z' => 'bra', 'BraA08t32236Z' => 'bra', 'BraA08t32841Z' => 'bra', 'BraA08t34524Z' => 'bra', 'BraA09t38742Z' => 'bra', 'BraA09t39295Z' => 'bra', 'C02p47180' => 'bna', 'C02p50990' => 'bna', 'C03p19360' => 'bna', 'C03p74950' => 'bna', 'C03p91000' => 'bna', 'C04p63260' => 'bna', 'C05p27050' => 'bna', 'C06p08750' => 'bna', 'C06p11490' => 'bna', 'C07p02820' => 'bna', 'C07p17180' => 'bna', 'C07p29440' => 'bna', 'C07p63730' => 'bna', 'C09p39260' => 'bna', 'CAN.G1164.34' => 'can', 'CAN.G1164.39' => 'can', 'CAN.G1530.3' => 'can', 'CAN.G162.61' => 'can', 'CAN.G176.6' => 'can', 'CAN.G289.49' => 'can', 'CAN.G370.21' => 'can', 'CAN.G370.22' => 'can', 'CAN.G371.117' => 'can', 'CAN.G58.37' => 'can', 'CAN.G588.98' => 'can', 'CANSAT21G2266' => 'cansat', 'CANSAT25G2799' => 'cansat', 'CANSAT35G0862' => 'cansat', 'CANSAT35G1704' => 'cansat', 'CANSAT35G1760' => 'cansat', 'CANSAT56G3971' => 'cansat', 'CANSAT56G4116' => 'cansat', 'CANSAT80G1259' => 'cansat', 'CARHR027730' => 'chi', 'CARHR033880' => 'chi', 'CARHR043270' => 'chi', 'CARHR145330' => 'chi', 'CARHR145340' => 'chi', 'CARHR175570' => 'chi', 'CARHR181570' => 'chi', 'CARHR258470' => 'chi', 'CARHR260490' => 'chi', 'CARHR294220' => 'chi', 'Carub.0001s2668' => 'cru', 'Carub.0001s3257' => 'cru', 'Carub.0001s4220' => 'cru', 'Carub.0005s0179' => 'cru', 'Carub.0006s2807' => 'cru', 'Carub.0007s0039' => 'cru', 'Carub.0008s0169' => 'cru', 'Carub.0008s0636' => 'cru', 'Ca_00338_v3' => 'car', 'Ca_00542_v3' => 'car', 'Ca_01844_v3' => 'car', 'Ca_10611_v3' => 'car', 'Ca_13326_v3' => 'car', 'Ca_17944_v3' => 'car', 'Ca_18546_v3' => 'car', 'Ca_24219_v3' => 'car', 'Ca_29972_v3' => 'car', 'CBR_g3681' => 'cbr', 'CBR_g40021' => 'cbr', 'Cc01_g08140' => 'ccan', 'Cc02_g13410' => 'ccan', 'Cc02_g37480' => 'ccan', 'Cc05_g12030' => 'ccan', 'Cc09_g03370' => 'ccan', 'Cc09_g10300' => 'ccan', 'Cc10_g03530' => 'ccan', 'Cc10_g11380' => 'ccan', 'CDE01G0176' => 'cde', 'CDE02G0675' => 'cde', 'CDE02G0942' => 'cde', 'CDE02G1153' => 'cde', 'CDE02G4177' => 'cde', 'CDE04G2117' => 'cde', 'CDE04G2736' => 'cde', 'CDE08G1161' => 'cde', 'CDE09G1238' => 'cde', 'Cfa000467' => 'cfa', 'Cfa000947' => 'cfa', 'Cfa004969' => 'cfa', 'Cfa005284' => 'cfa', 'Cfa008993' => 'cfa', 'Cfa018187' => 'cfa', 'Cfa018454' => 'cfa', 'Cfa020585' => 'cfa', 'Ciclev10000424m.g' => 'ccl', 'Ciclev10003605m.g' => 'ccl', 'Ciclev10007828m.g' => 'ccl', 'Ciclev10014620m.g' => 'ccl', 'Ciclev10015169m.g' => 'ccl', 'Ciclev10018291m.g' => 'ccl', 'Ciclev10028256m.g' => 'ccl', 'Ciclev10033822m.g' => 'ccl', 'CiPaw.05G060300' => 'cil', 'CiPaw.05G085000' => 'cil', 'CiPaw.06G083700' => 'cil', 'CiPaw.06G120300' => 'cil', 'CiPaw.09G060500' => 'cil', 'CiPaw.09G123800' => 'cil', 'CiPaw.11G169700' => 'cil', 'CiPaw.12G118300' => 'cil', 'CiPaw.15G071000' => 'cil', 'CiPaw.15G081900' => 'cil', 'ClCG01G024610' => 'cla', 'ClCG03G006070' => 'cla', 'ClCG05G019250' => 'cla', 'ClCG09G009500' => 'cla', 'ClCG11G008200' => 'cla', 'ClCG11G018080' => 'cla', 'COL.COLO4_17373' => 'col', 'COL.COLO4_22994' => 'col', 'COL.COLO4_26389' => 'col', 'COL.COLO4_27170' => 'col', 'COL.COLO4_31074' => 'col', 'COL.COLO4_31465' => 'col', 'COL.COLO4_36438' => 'col', 'COL.COLO4_36439' => 'col', 'Cpa.g.c38781' => 'cpa', 'Cpa.g.sc128.12' => 'cpa', 'Cpa.g.sc166.7' => 'cpa', 'Cpa.g.sc166.8' => 'cpa', 'Cpa.g.sc20.111' => 'cpa', 'Cpa.g.sc27.31' => 'cpa', 'Cpa.g.sc64.36' => 'cpa', 'Cpa.g.sc64.37' => 'cpa', 'Cpa.g.sc66.49' => 'cpa', 'Cpa.g.sc80.64' => 'cpa', 'CsaV3_1G012320' => 'csa', 'CsaV3_2G008480' => 'csa', 'CsaV3_2G033450' => 'csa', 'CsaV3_3G044830' => 'csa', 'CsaV3_4G033710' => 'csa', 'CsaV3_6G051730' => 'csa', 'CsaV3_7G025350' => 'csa', 'CSS0001067' => 'camsi', 'CSS0005996' => 'camsi', 'CSS0006590' => 'camsi', 'CSS0009673' => 'camsi', 'CSS0010201' => 'camsi', 'CSS0010549' => 'camsi', 'CSS0011364' => 'camsi', 'CSS0014473' => 'camsi', 'CSS0014961' => 'camsi', 'CSS0020191' => 'camsi', 'CSS0021165' => 'camsi', 'CSS0022306' => 'camsi', 'CSS0030591' => 'camsi', 'CSS0030696' => 'camsi', 'CSS0032653' => 'camsi', 'CSS0037487' => 'camsi', 'CSS0041102' => 'camsi', 'CSS0041261' => 'camsi', 'CSS0046246' => 'camsi', 'CSS0049256' => 'camsi', 'DCAR_004075' => 'dca', 'DCAR_011538' => 'dca', 'DCAR_019553' => 'dca', 'DCAR_020952' => 'dca', 'DCAR_021739' => 'dca', 'DCAR_027407' => 'dca', 'DCAR_027913' => 'dca', 'DCAR_028066' => 'dca', 'Dinv05899' => 'din', 'Dinv07563' => 'din', 'Dinv08010' => 'din', 'Dinv14125' => 'din', 'Dinv20172' => 'din', 'Dinv30743' => 'din', 'Dinv31229' => 'din', 'Dinv34162' => 'din', 'Dinv36028' => 'din', 'Dinv39368' => 'din', 'Dinv40565' => 'din', 'Dinv41706' => 'din', 'Duzib052G0089' => 'dzi', 'Duzib116G0641' => 'dzi', 'Duzib132G0069' => 'dzi', 'Duzib132G1219' => 'dzi', 'Duzib147G0278' => 'dzi', 'Duzib160G0480' => 'dzi', 'Duzib170G0661' => 'dzi', 'Duzib177G0591' => 'dzi', 'Duzib187G1353' => 'dzi', 'Duzib192G0858' => 'dzi', 'Duzib192G0883' => 'dzi', 'Duzib213G0506' => 'dzi', 'Duzib235G0289' => 'dzi', 'Duzib251G0422' => 'dzi', 'ECA232G3898' => 'eca', 'ECA233G5950' => 'eca', 'ECA234G1699' => 'eca', 'ECA234G2421' => 'eca', 'ECA236G0426' => 'eca', 'ECA236G4331' => 'eca', 'ECA248G2573' => 'eca', 'EL10Ac1g00077' => 'bvu', 'EL10Ac1g01746' => 'bvu', 'EL10Ac2g03464' => 'bvu', 'EL10Ac4g08176' => 'bvu', 'EL10Ac7g17521' => 'bvu', 'EL10Ac8g20386' => 'bvu', 'EL10Ac9g21343' => 'bvu', 'EL10Ac9g22688' => 'bvu', 'Eucgr.B03434' => 'egr', 'Eucgr.D00618' => 'egr', 'Eucgr.E02395' => 'egr', 'Eucgr.F01129' => 'egr', 'Eucgr.F02622' => 'egr', 'Eucgr.F04207' => 'egr', 'FAN01G0570' => 'fan', 'FAN03G3351' => 'fan', 'FAN06G3702' => 'fan', 'FAN07G2149' => 'fan', 'FAN10G3758' => 'fan', 'FAN11G1170' => 'fan', 'FAN11G2050' => 'fan', 'FAN11G2724' => 'fan', 'FAN12G1700' => 'fan', 'FAN12G2028' => 'fan', 'FAN15G1160' => 'fan', 'FAN15G3063' => 'fan', 'FAN16G2540' => 'fan', 'FAN16G3077' => 'fan', 'FAN16G3624' => 'fan', 'FAN17G0221' => 'fan', 'FAN20G2492' => 'fan', 'FAN20G2905' => 'fan', 'FAN21G0548' => 'fan', 'FAN21G1300' => 'fan', 'FAN22G0077' => 'fan', 'FAN22G1315' => 'fan', 'FAN24G1280' => 'fan', 'FAN24G1445' => 'fan', 'FAN24G3527' => 'fan', 'FAN25G0464' => 'fan', 'FAN25G2885' => 'fan', 'FAN25G3270' => 'fan', 'FAN27G1101' => 'fan', 'FAN27G2846' => 'fan', 'FAN27G3524' => 'fan', 'FvH4_2g11770' => 'fve', 'FvH4_2g15630' => 'fve', 'FvH4_3g05570' => 'fve', 'FvH4_3g09110' => 'fve', 'FvH4_3g19940' => 'fve', 'FvH4_4g04821' => 'fve', 'FvH4_4g31480' => 'fve', 'FvH4_7g01740' => 'fve', 'Glyma.05G130400' => 'gma', 'Glyma.05G156400' => 'gma', 'Glyma.07G197000' => 'gma', 'Glyma.08G085151' => 'gma', 'Glyma.08G114500' => 'gma', 'Glyma.08G300400' => 'gma', 'Glyma.10G215800' => 'gma', 'Glyma.12G224400' => 'gma', 'Glyma.13G179300' => 'gma', 'Glyma.13G218151' => 'gma', 'Glyma.13G238800' => 'gma', 'Glyma.13G276900' => 'gma', 'Glyma.14G078200' => 'gma', 'Glyma.15G074500' => 'gma', 'Glyma.15G094100' => 'gma', 'Glyma.17G247200' => 'gma', 'Glyma.18G120100' => 'gma', 'Glyma.20G176000' => 'gma', 'Gohir.A01G063600' => 'ghi', 'Gohir.A01G170301' => 'ghi', 'Gohir.A02G060500' => 'ghi', 'Gohir.A05G133850' => 'ghi', 'Gohir.A05G161400' => 'ghi', 'Gohir.A06G012900' => 'ghi', 'Gohir.A06G035901' => 'ghi', 'Gohir.A06G127100' => 'ghi', 'Gohir.A06G210500' => 'ghi', 'Gohir.A08G008650' => 'ghi', 'Gohir.A09G072700' => 'ghi', 'Gohir.A09G088301' => 'ghi', 'Gohir.A10G040600' => 'ghi', 'Gohir.A12G036300' => 'ghi', 'Gohir.A12G143350' => 'ghi', 'Gohir.A12G165500' => 'ghi', 'Gohir.A13G145700' => 'ghi', 'Gohir.D01G050000' => 'ghi', 'Gohir.D01G051366' => 'ghi', 'Gohir.D01G161350' => 'ghi', 'Gohir.D02G065900' => 'ghi', 'Gohir.D05G164200' => 'ghi', 'Gohir.D05G355500' => 'ghi', 'Gohir.D06G010400' => 'ghi', 'Gohir.D06G111250' => 'ghi', 'Gohir.D06G132000' => 'ghi', 'Gohir.D06G210500' => 'ghi', 'Gohir.D07G165675' => 'ghi', 'Gohir.D08G062240' => 'ghi', 'Gohir.D08G086101' => 'ghi', 'Gohir.D08G138060' => 'ghi', 'Gohir.D09G072300' => 'ghi', 'Gohir.D10G041400' => 'ghi', 'Gohir.D11G191020' => 'ghi', 'Gohir.D11G212066' => 'ghi', 'Gohir.D12G036300' => 'ghi', 'Gohir.D12G168600' => 'ghi', 'Gohir.D13G150600' => 'ghi', 'Gorai.001G057300' => 'gra', 'Gorai.002G069900' => 'gra', 'Gorai.002G200000' => 'gra', 'Gorai.003G067600' => 'gra', 'Gorai.005G074800' => 'gra', 'Gorai.006G087300' => 'gra', 'Gorai.008G037500' => 'gra', 'Gorai.008G181400' => 'gra', 'Gorai.009G169400' => 'gra', 'Gorai.009G387900' => 'gra', 'Gorai.010G013300' => 'gra', 'Gorai.010G153800' => 'gra', 'Gorai.010G255800' => 'gra', 'Gorai.011G043700' => 'gra', 'Gorai.011G198900' => 'gra', 'Gorai.013G168400' => 'gra', 'GSVIVG01005212001' => 'vvi', 'GSVIVG01006163001' => 'vvi', 'GSVIVG01009625001' => 'vvi', 'GSVIVG01014338001' => 'vvi', 'GSVIVG01020005001' => 'vvi', 'GSVIVG01021450001' => 'vvi', 'GSVIVG01023975001' => 'vvi', 'GSVIVG01034490001' => 'vvi', 'HanXRQChr04g0112071' => 'han', 'HanXRQChr05g0131151' => 'han', 'HanXRQChr09g0262371' => 'han', 'HanXRQChr09g0268401' => 'han', 'HanXRQChr10g0279241' => 'han', 'HanXRQChr10g0297961' => 'han', 'HanXRQChr11g0326231' => 'han', 'HanXRQChr11g0328471' => 'han', 'HanXRQChr16g0507941' => 'han', 'HanXRQChr17g0560211' => 'han', 'Haze_02108' => 'cav', 'Haze_02428' => 'cav', 'Haze_05593' => 'cav', 'Haze_06448' => 'cav', 'Haze_09427' => 'cav', 'Haze_12022' => 'cav', 'Haze_17612' => 'cav', 'Haze_17928' => 'cav', 'Hma1.2p1_0032F.1_g019250' => 'hma', 'Hma1.2p1_0163F.1_g072690' => 'hma', 'Hma1.2p1_0265F.1_g106710' => 'hma', 'Hma1.2p1_0286F.1_g113970' => 'hma', 'Hma1.2p1_0363F.1_g136640' => 'hma', 'Hma1.2p1_0584F.1_g183470' => 'hma', 'Hma1.2p1_0885F.1_g232570' => 'hma', 'HPP92_006022' => 'vpl', 'HPP92_007320' => 'vpl', 'HPP92_011521' => 'vpl', 'HPP92_019387' => 'vpl', 'HPP92_024038' => 'vpl', 'Hund05891' => 'sun', 'Hund06450' => 'sun', 'Hund12053' => 'sun', 'Hund16800' => 'sun', 'Hund21222' => 'sun', 'Hund22896' => 'sun', 'Hund23746' => 'sun', 'Hund27083' => 'sun', 'Lalb_Chr02g0141831' => 'lal', 'Lalb_Chr02g0141841' => 'lal', 'Lalb_Chr05g0220411' => 'lal', 'Lalb_Chr06g0162081' => 'lal', 'Lalb_Chr09g0327651' => 'lal', 'Lalb_Chr13g0295051' => 'lal', 'Lalb_Chr15g0086801' => 'lal', 'Lalb_Chr16g0383781' => 'lal', 'Lalb_Chr16g0383791' => 'lal', 'Lalb_Chr18g0055441' => 'lal', 'Lalb_Chr18g0059611' => 'lal', 'Lalb_Chr20g0109661' => 'lal', 'Lalb_Chr20g0109831' => 'lal', 'Lalb_Chr20g0121871' => 'lal', 'Lalb_Chr22g0355361' => 'lal', 'Lalb_Chr25g0286371' => 'lal', 'Lj1A1187G43' => 'lonja', 'Lj1A1205T50' => 'lonja', 'Lj1A800G33' => 'lonja', 'Lj1C1187T7' => 'lonja', 'Lj1C843T11' => 'lonja', 'Lj1g0010940' => 'lja', 'Lj2A288T69' => 'lonja', 'Lj3g0024276' => 'lja', 'Lj4A47T76' => 'lonja', 'Lj4g0005805' => 'lja', 'Lj4g0006097' => 'lja', 'Lj4g0008528' => 'lja', 'Lj4g0024907' => 'lja', 'Lj5g0012472' => 'lja', 'Lj5g0018648' => 'lja', 'Lj6C789G1' => 'lonja', 'Lj6g0004000' => 'lja', 'Lj7A292G67' => 'lonja', 'Lj7A292T64' => 'lonja', 'Lj9A400T58' => 'lonja', 'Lsat_1_v5_gn_1_126181' => 'lsa', 'Lsat_1_v5_gn_4_123041' => 'lsa', 'Lsat_1_v5_gn_4_133620' => 'lsa', 'Lsat_1_v5_gn_4_53221' => 'lsa', 'Lsat_1_v5_gn_4_71961' => 'lsa', 'Lsat_1_v5_gn_7_105241' => 'lsa', 'Lsat_1_v5_gn_7_21361' => 'lsa', 'Lsat_1_v5_gn_7_28860' => 'lsa', 'Lsat_1_v5_gn_7_31260' => 'lsa', 'Lsat_1_v5_gn_8_52801' => 'lsa', 'Manes.02G191400' => 'mes', 'Manes.03G110100' => 'mes', 'Manes.04G071100' => 'mes', 'Manes.05G100500' => 'mes', 'Manes.05G164700' => 'mes', 'Manes.15G087000' => 'mes', 'Manes.15G121500' => 'mes', 'Manes.16G028300' => 'mes', 'Manes.17G046100' => 'mes', 'Manes.17G069800' => 'mes', 'Manes.18G100500' => 'mes', 'Mapoly0002s0109' => 'mpo', 'Mapoly0024s0007' => 'mpo', 'Mapoly0089s0032' => 'mpo', 'MBI04_g42241_MAGBIO' => 'mbi', 'MBI05_g11988_MAGBIO' => 'mbi', 'MBI05_g35452_MAGBIO' => 'mbi', 'MBI07_g30179_MAGBIO' => 'mbi', 'MBI07_g35859_MAGBIO' => 'mbi', 'MBI07_g35860_MAGBIO' => 'mbi', 'MBI07_g37166_MAGBIO' => 'mbi', 'MBI08_g18172_MAGBIO' => 'mbi', 'MBI09_g08441_MAGBIO' => 'mbi', 'MBI13_g01676_MAGBIO' => 'mbi', 'MBI14_g42955_MAGBIO' => 'mbi', 'MBI16_g13161_MAGBIO' => 'mbi', 'MBI17_g27204_MAGBIO' => 'mbi', 'MBI19_g21595_MAGBIO' => 'mbi', 'MD00G1148400' => 'mdo', 'MD02G1301200' => 'mdo', 'MD03G1227800' => 'mdo', 'MD05G1041100' => 'mdo', 'MD05G1124800' => 'mdo', 'MD05G1284000' => 'mdo', 'MD05G1338800' => 'mdo', 'MD05G1338900' => 'mdo', 'MD07G1022800' => 'mdo', 'MD10G1047500' => 'mdo', 'MD10G1127500' => 'mdo', 'MD10G1262300' => 'mdo', 'MD10G1293800' => 'mdo', 'MD16G1074300' => 'mdo', 'Medtr1g021670' => 'mtr', 'Medtr1g096320' => 'mtr', 'Medtr2g013690' => 'mtr', 'Medtr2g019450' => 'mtr', 'Medtr2g085170' => 'mtr', 'Medtr4g088785' => 'mtr', 'Medtr8g055930' => 'mtr', 'Medtr8g085850' => 'mtr', 'MELO3C002605.2' => 'cme', 'MELO3C003891.2' => 'cme', 'MELO3C004012.2' => 'cme', 'MELO3C007134.2' => 'cme', 'MELO3C008118.2' => 'cme', 'MELO3C016700.2' => 'cme', 'MELO3C024127.2' => 'cme', 'MELO3C033361.2' => 'cme', 'MELO3C033362.2' => 'cme', 'Migut.C00430' => 'egut', 'Migut.C01246' => 'egut', 'Migut.E00101' => 'egut', 'Migut.H01486' => 'egut', 'Migut.H01939' => 'egut', 'Migut.K00360' => 'egut', 'Migut.M00910' => 'egut', 'Migut.M01139' => 'egut', 'Migut.N02677' => 'egut', 'MSTRG.13252' => 'ama', 'MSTRG.14701' => 'ama', 'MSTRG.1521' => 'ama', 'MSTRG.15884' => 'ama', 'MSTRG.16242' => 'ama', 'MSTRG.22285' => 'ama', 'MSTRG.22444' => 'ama', 'MSTRG.2349' => 'ama', 'MSTRG.26308' => 'ama', 'MSTRG.28296' => 'ama', 'MSTRG.9895' => 'ama', 'Nitab4.5_0000110g0060' => 'nta', 'Nitab4.5_0000420g0130' => 'nta', 'Nitab4.5_0000422g0030' => 'nta', 'Nitab4.5_0000560g0180' => 'nta', 'Nitab4.5_0000703g0100' => 'nta', 'Nitab4.5_0000786g0200' => 'nta', 'Nitab4.5_0001336g0020' => 'nta', 'Nitab4.5_0001796g0030' => 'nta', 'Nitab4.5_0003348g0060' => 'nta', 'Nitab4.5_0003698g0040' => 'nta', 'Nitab4.5_0003942g0090' => 'nta', 'Nitab4.5_0004775g0070' => 'nta', 'Nitab4.5_0004864g0030' => 'nta', 'Nitab4.5_0005615g0020' => 'nta', 'Nitab4.5_0009288g0030' => 'nta', 'Nitab4.5_0009341g0010' => 'nta', 'Nitab4.5_0009535g0010' => 'nta', 'Nn1g03995' => 'nnu', 'Nn1g04100' => 'nnu', 'Nn1g06530' => 'nnu', 'Nn3g16404' => 'nnu', 'Nn3g17212' => 'nnu', 'Nn3g20776' => 'nnu', 'Nn3g21923' => 'nnu', 'Nn5g27737' => 'nnu', 'Nn5g29461' => 'nnu', 'Nn7g38355' => 'nnu', 'Nn8g39873' => 'nnu', 'Oeu000548.2' => 'oeu', 'Oeu004672.1' => 'oeu', 'Oeu015605.2' => 'oeu', 'Oeu016092.1' => 'oeu', 'Oeu017879.3' => 'oeu', 'Oeu024910.1' => 'oeu', 'Oeu028965.1' => 'oeu', 'Oeu031269.1' => 'oeu', 'Oeu031270.1' => 'oeu', 'Oeu032535.1' => 'oeu', 'Oeu034151.1' => 'oeu', 'Oeu034152.1' => 'oeu', 'Oeu034588.2' => 'oeu', 'Oeu050846.1' => 'oeu', 'Oeu050849.2' => 'oeu', 'Oeu051063.2' => 'oeu', 'Oeu052368.1' => 'oeu', 'Oeu052370.1' => 'oeu', 'Os01g0210400' => 'osa', 'Os01g0304300' => 'osa', 'Os01g0749100' => 'osa', 'Os02g0745800' => 'osa', 'Os03g0769050' => 'osa', 'Os05g0531500' => 'osa', 'Os06g0724300' => 'osa', 'Os11g0198100' => 'osa', 'Peaxi162Scf00069g01425' => 'pax', 'Peaxi162Scf00280g00811' => 'pax', 'Peaxi162Scf00310g00615' => 'pax', 'Peaxi162Scf00362g00542' => 'pax', 'Peaxi162Scf00461g00310' => 'pax', 'Peaxi162Scf00530g00118' => 'pax', 'Peaxi162Scf00541g00057' => 'pax', 'Peaxi162Scf00661g00017' => 'pax', 'Peaxi162Scf00926g00027' => 'pax', 'Peaxi162Scf01064g00263' => 'pax', 'Peaxi162Scf01211g00135' => 'pax', 'PGR004G2336' => 'pgr', 'PGR042G0327' => 'pgr', 'PGR042G1957' => 'pgr', 'PGR042G2003' => 'pgr', 'PGR042G3929' => 'pgr', 'PGR083G1137' => 'pgr', 'PGR083G1364' => 'pgr', 'PGSC0003DMG400003381' => 'stu', 'PGSC0003DMG400003417' => 'stu', 'PGSC0003DMG400008981' => 'stu', 'PGSC0003DMG400012417' => 'stu', 'PGSC0003DMG400012823' => 'stu', 'PGSC0003DMG400016885' => 'stu', 'PGSC0003DMG400022812' => 'stu', 'PGSC0003DMG400029726' => 'stu', 'PGSC0003DMG401009243' => 'stu', 'PGSC0003DMG401031505' => 'stu', 'PGSC0003DMG402031505' => 'stu', 'Phvul.001G017600' => 'pvu', 'Phvul.002G193500' => 'pvu', 'Phvul.002G228900' => 'pvu', 'Phvul.002G236800' => 'pvu', 'Phvul.003G049500' => 'pvu', 'Phvul.005G072000' => 'pvu', 'Phvul.006G164800' => 'pvu', 'Phvul.006G185100' => 'pvu', 'Phvul.007G090000' => 'pvu', 'Potri.001G399800' => 'ptr', 'Potri.002G149900' => 'ptr', 'Potri.004G044100' => 'ptr', 'Potri.004G177600' => 'ptr', 'Potri.009G138000' => 'ptr', 'Potri.010G094000' => 'ptr', 'Potri.011G053000' => 'ptr', 'Potri.011G119300' => 'ptr', 'Potri.013G113700' => 'ptr', 'Potri.018G107800' => 'ptr', 'Potri.019G084100' => 'ptr', 'Pp3c14_23720' => 'ppa', 'Pp3c16_6340' => 'ppa', 'Pp3c23_13420' => 'ppa', 'Pp3c24_2740' => 'ppa', 'Pp3c25_860' => 'ppa', 'Pp3c8_21750' => 'ppa', 'Prupe.1G273000' => 'ppe', 'Prupe.1G273700' => 'ppe', 'Prupe.1G274100' => 'ppe', 'Prupe.2G023300' => 'ppe', 'Prupe.4G048000' => 'ppe', 'Prupe.4G080400' => 'ppe', 'Prupe.4G181200' => 'ppe', 'Prupe.8G056900' => 'ppe', 'Prupe.8G168700' => 'ppe', 'Psat1g189080' => 'psa', 'Psat1g204760' => 'psa', 'Psat4g175560' => 'psa', 'Psat4g177720' => 'psa', 'Psat5g244240' => 'psa', 'Psat6g010720' => 'psa', 'Psat6g187200' => 'psa', 'Psat7g072040' => 'psa', 'PSO017G3501' => 'pso', 'PSO063G2148' => 'pso', 'PSO063G5608' => 'pso', 'PSO210G6392' => 'pso', 'PSO541G2319' => 'pso', 'PSO541G2836' => 'pso', 'PSO541G4012' => 'pso', 'PSO541G6253' => 'pso', 'PSO675G0580' => 'pso', 'PSO675G0856' => 'pso', 'PSO675G5635' => 'pso', 'PSO675G9157' => 'pso', 'PSO832G1660' => 'pso', 'PSO832G1969' => 'pso', 'QL02p007186' => 'qlo', 'QL02p033904' => 'qlo', 'QL03p064391' => 'qlo', 'QL05p040593' => 'qlo', 'QL05p058242' => 'qlo', 'QL08p021825' => 'qlo', 'QL11p004981' => 'qlo', 'RcHm_v2.0_Chr1g0318301' => 'rch', 'RcHm_v2.0_Chr4g0418501' => 'rch', 'RcHm_v2.0_Chr4g0439971' => 'rch', 'RcHm_v2.0_Chr5g0008541' => 'rch', 'RcHm_v2.0_Chr5g0014101' => 'rch', 'RcHm_v2.0_Chr5g0014131' => 'rch', 'RcHm_v2.0_Chr5g0033621' => 'rch', 'RcHm_v2.0_Chr6g0272041' => 'rch', 'RcHm_v2.0_Chr6g0278831' => 'rch', 'Rhsim02G0130400' => 'rsi', 'Rhsim02G0171100' => 'rsi', 'Rhsim05G0053000' => 'rsi', 'Rhsim05G0053100' => 'rsi', 'Rhsim06G0096500' => 'rsi', 'Rhsim06G0096600' => 'rsi', 'Rhsim06G0199100' => 'rsi', 'Rhsim12G0062300' => 'rsi', 'Rhsim12G0062800' => 'rsi', 'Sabra02G0118600' => 'sbr', 'Sabra04G0027300' => 'sbr', 'Sabra04G0119500' => 'sbr', 'Sabra08G0112500' => 'sbr', 'Sabra11G0036800' => 'sbr', 'Sabra11G0103800' => 'sbr', 'Sabra13G0096300' => 'sbr', 'Sabra16G0262300' => 'sbr', 'Sabra18G0091700' => 'sbr', 'Sabra19G0095400' => 'sbr', 'SalBow6G3080' => 'sbo', 'SalBow7G1157' => 'sbo', 'SalBow7G2123' => 'sbo', 'SalBow7G2285' => 'sbo', 'SalBow7G3537' => 'sbo', 'SalBow8G2947' => 'sbo', 'SalBow8G4463' => 'sbo', 'SalBow8G5466' => 'sbo', 'Sc01g0001750' => 'sci', 'Sc02g0006640' => 'sci', 'Sc02g0006670' => 'sci', 'Sc04g0008220' => 'sci', 'Sc05g0006190' => 'sci', 'Sc08g0002760' => 'sci', 'Sc17g0006170' => 'sci', 'Sc22g0002050' => 'sci', 'Sc23g0001190' => 'sci', 'Sc24g0000980' => 'sci', 'Sed0006245' => 'sed', 'Sed0007543' => 'sed', 'Sed0009411' => 'sed', 'Sed0010765' => 'sed', 'Sed0012944' => 'sed', 'Sed0014682' => 'sed', 'Sed0016174' => 'sed', 'Sed0016796' => 'sed', 'Sed0020317' => 'sed', 'Sed0021467' => 'sed', 'SEGI_01316' => 'sgi', 'SEGI_03374' => 'sgi', 'SEGI_16265' => 'sgi', 'SEGI_18569' => 'sgi', 'SEGI_20351' => 'sgi', 'SEGI_26395' => 'sgi', 'SEGI_29469' => 'sgi', 'SEGI_34771' => 'sgi', 'SEGI_36769' => 'sgi', 'SEGI_37139' => 'sgi', 'SGA_v2.0_scaffold100G29687' => 'sas', 'SGA_v2.0_scaffold118G32472' => 'sas', 'SGA_v2.0_scaffold14G07051' => 'sas', 'SGA_v2.0_scaffold183G39845' => 'sas', 'SGA_v2.0_scaffold1G00174' => 'sas', 'SGA_v2.0_scaffold22G09714' => 'sas', 'SGA_v2.0_scaffold333G48992' => 'sas', 'SGA_v2.0_scaffold46G17491' => 'sas', 'SGA_v2.0_scaffold49G18294' => 'sas', 'SGA_v2.0_scaffold63G21658' => 'sas', 'SHI01741' => 'shi', 'SHI05771' => 'shi', 'SHI18077' => 'shi', 'SHI20525' => 'shi', 'SHI20527' => 'shi', 'SHI20528' => 'shi', 'SMO172G0185' => 'smo', 'SMO198G0020' => 'smo', 'SMO351G0006' => 'smo', 'SMO356G0118' => 'smo', 'SMO358G0296' => 'smo', 'SMO367G0079' => 'smo', 'SMO367G1277' => 'smo', 'Solyc01g014220.3' => 'sly', 'Solyc01g111770.2' => 'sly', 'Solyc02g078180.3' => 'sly', 'Solyc03g006430.3' => 'sly', 'Solyc03g006456.1' => 'sly', 'Solyc03g079860.2' => 'sly', 'Solyc04g079770.3' => 'sly', 'Solyc05g007430.4' => 'sly', 'Solyc07g063150.3' => 'sly', 'Solyc08g016620.3' => 'sly', 'Solyc09g057590.3' => 'sly', 'Solyc09g057600.1' => 'sly', 'Solyc10g009050.3' => 'sly', 'Solyc11g017420.2' => 'sly', 'Sopen01g053810' => 'spe', 'Sopen02g023040' => 'spe', 'Sopen03g002440' => 'spe', 'Sopen04g033350' => 'spe', 'Sopen05g003310' => 'spe', 'Sopen07g004050' => 'spe', 'Sopen07g031340' => 'spe', 'Sopen08g006990' => 'spe', 'Sopen10g004830' => 'spe', 'Sopen11g009370' => 'spe', 'Sp1g24450' => 'spa', 'Sp1g29670' => 'spa', 'Sp1g39600' => 'spa', 'Sp2g11080' => 'spa', 'Sp2g13970' => 'spa', 'Sp4g16130' => 'spa', 'Sp6g13080' => 'spa', 'Sp7g37270' => 'spa', 'TAR371G0065' => 'tar', 'TAR376G0340' => 'tar', 'TAR376G0435' => 'tar', 'TAR381G0002' => 'tar', 'TAR381G1236' => 'tar', 'TAR624G0055' => 'tar', 'TAR624G0324' => 'tar', 'TAR624G0696' => 'tar', 'TAR624G0906' => 'tar', 'TAR625G0107' => 'tar', 'TAR626G0015' => 'tar', 'TAR626G1356' => 'tar', 'TAR627G0888' => 'tar', 'TAR628G0399' => 'tar', 'TAR628G1327' => 'tar', 'TAR629G2831' => 'tar', 'TAR629G2874' => 'tar', 'TAR633G1432' => 'tar', 'TAR633G2771' => 'tar', 'THA.LOC104803394' => 'tha', 'THA.LOC104805153' => 'tha', 'THA.LOC104806784' => 'tha', 'THA.LOC104810473' => 'tha', 'THA.LOC104813100' => 'tha', 'THA.LOC104814215' => 'tha', 'THA.LOC104815554' => 'tha', 'THA.LOC104820544' => 'tha', 'THA.LOC104824754' => 'tha', 'THA.LOC104827717' => 'tha', 'Thecc.02G031400' => 'tca', 'Thecc.02G055900' => 'tca', 'Thecc.02G350800' => 'tca', 'Thecc.06G150900' => 'tca', 'Thecc.06G186600' => 'tca', 'Thecc.07G089600' => 'tca', 'Thecc.08G020400' => 'tca', 'Thecc.08G182100' => 'tca', 'Thhalv10000873m.g' => 'esa', 'Thhalv10004185m.g' => 'esa', 'Thhalv10006981m.g' => 'esa', 'Thhalv10007204m.g' => 'esa', 'Thhalv10011374m.g' => 'esa', 'Thhalv10013482m.g' => 'esa', 'Thhalv10017801m.g' => 'esa', 'Thhalv10024983m.g' => 'esa', 'TPR.G12072' => 'tpr', 'TPR.G15769' => 'tpr', 'TPR.G16504' => 'tpr', 'TPR.G16506' => 'tpr', 'TPR.G24345' => 'tpr', 'TPR.G26666' => 'tpr', 'TPR.G27320' => 'tpr', 'TPR.G31819' => 'tpr', 'TPR.G38879' => 'tpr', 'TPR.G39015' => 'tpr', 'TPR.G8819' => 'tpr', 'TWI09G0924' => 'twi', 'TWI12G0811' => 'twi', 'TWI12G1294' => 'twi', 'TWI31G0150' => 'twi', 'TWI36G1262' => 'twi', 'TWI38G1287' => 'twi', 'TWI38G1633' => 'twi', 'TWI38G1982' => 'twi', 'TWI39G0116' => 'twi', 'TWI60G1011' => 'twi', 'TWI63G0171' => 'twi', 'TWI73G0839' => 'twi', 'TWI79G1511' => 'twi', 'unitig_0.g915' => 'ugi', 'unitig_0.g916' => 'ugi', 'unitig_21.g20219' => 'ugi', 'unitig_21.g20416' => 'ugi', 'unitig_578.g16132' => 'ugi', 'unitig_578.g16718' => 'ugi', 'unitig_62.g23481' => 'ugi', 'unitig_744.g24535' => 'ugi', 'unitig_749.g13525' => 'ugi', 'vmacro01248' => 'vma', 'vmacro02290' => 'vma', 'vmacro10946' => 'vma', 'vmacro11865' => 'vma', 'vmacro12493' => 'vma', 'vmacro17322' => 'vma', 'vmacro21599' => 'vma', 'vmacro23041' => 'vma', 'VMungo0251G0004' => 'vmu', 'VMungo0251G2639' => 'vmu', 'VMungo0251G2967' => 'vmu', 'VMungo0540G0864' => 'vmu', 'VMungo0540G1569' => 'vmu', 'VMungo0647G0317' => 'vmu', 'VMungo0720G1373' => 'vmu', 'VMungo0720G1508' => 'vmu', 'VMungo1080G0485' => 'vmu', 'VMungo1215G3177' => 'vmu', 'Zm00001eb112600' => 'zma', 'Zm00001eb120220' => 'zma', 'Zm00001eb153240' => 'zma', 'Zm00001eb168880' => 'zma', 'Zm00001eb213920' => 'zma', 'Zm00001eb228280' => 'zma', 'Zm00001eb254580' => 'zma', 'Zm00001eb272180' => 'zma', 'Zm00001eb293190' => 'zma', 'Zm00001eb322930' => 'zma', 'Zm00001eb353360' => 'zma', 'Zm00001eb353390' => 'zma', 'Zm00001eb353430' => 'zma', 'Zm00001eb353440' => 'zma', 'Zm00001eb353780' => 'zma' ) $gf_id = 'HOM05D000499' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000499' ) $data_identifier = 'HOM05D000499' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 29, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 12, 'amhyb' => (int) 8, 'aly' => (int) 12, 'aox' => (int) 9, 'arhy' => (int) 26, 'ath' => (int) 8, 'atr' => (int) 7, 'acertr' => (int) 10, 'cqu' => (int) 15, 'bca' => (int) 29, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 11, 'cansat' => (int) 8, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 9, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 8, 'cpa' => (int) 10, 'csa' => (int) 7, 'camsi' => (int) 20, 'dca' => (int) 8, 'din' => (int) 12, 'dzi' => (int) 14, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 6, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 38, 'gra' => (int) 16, 'vvi' => (int) 8, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 5, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 11, 'lja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 11, 'mpo' => (int) 3, 'mbi' => (int) 14, 'mdo' => (int) 14, 'mtr' => (int) 8, 'cme' => (int) 9, 'egut' => (int) 9, 'ama' => (int) 11, 'nta' => (int) 17, 'nnu' => (int) 11, 'oeu' => (int) 18, 'osa' => (int) 8, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 6, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 9, 'rsi' => (int) 9, 'sbr' => (int) 10, 'sbo' => (int) 8, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 10, 'sas' => (int) 10, 'shi' => (int) 6, 'smo' => (int) 7, 'sly' => (int) 14, 'spe' => (int) 10, 'spa' => (int) 8, 'tar' => (int) 19, 'tha' => (int) 10, 'tca' => (int) 8, 'esa' => (int) 8, 'tpr' => (int) 11, 'twi' => (int) 13, 'ugi' => (int) 9, 'vma' => (int) 8, 'vmu' => (int) 10, 'zma' => (int) 15 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb353780' $species_info = array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ) $local_species = 'can' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000499', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1066', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p29780' => 'bna', 'A02p33180' => 'bna', 'A03p16470' => 'bna', 'A03p66010' => 'bna', 'A04p25970' => 'bna', 'A06p01270' => 'bna', 'A06p46080' => 'bna', 'A07p11400' => 'bna', 'A08p01840' => 'bna', 'A08p08230' => 'bna', 'A08p25740' => 'bna', 'A09p32070' => 'bna', 'A09p37830' => 'bna', 'A09p42840' => 'bna', 'A09p42850' => 'bna', 'Aa31LG10G2060' => 'aar', 'Aa31LG2G7410' => 'aar', 'Aa31LG6G10200' => 'aar', 'Aa31LG6G16680' => 'aar', 'Aa31LG6G8470' => 'aar', 'Aa31LG9G12730' => 'aar', 'Aa31LG9G13680' => 'aar', 'Aa31LG9G14920' => 'aar', 'Aa31LG9G6650' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4977' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5467' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3254' => 'aag', 'Actinidia02578' => 'ach', 'Actinidia07693' => 'ach', 'Actinidia08413' => 'ach', 'Actinidia08414' => 'ach', 'Actinidia15289' => 'ach', 'Actinidia19871' => 'ach', 'Actinidia21475' => 'ach', 'Actinidia22576' => 'ach', 'Actinidia28327' => 'ach', 'Actinidia32491' => 'ach', 'Actinidia39463' => 'ach', 'Actinidia39571' => 'ach', 'Ah.01g013750' => 'amhyb', 'Ah.01g023210' => 'amhyb', 'Ah.04g164850' => 'amhyb', 'Ah.05g178060' => 'amhyb', 'Ah.07g204270' => 'amhyb', 'Ah.07g208480' => 'amhyb', 'Ah.09g237410' => 'amhyb', 'Ah.14g089460' => 'amhyb', 'AL1G41790' => 'aly', 'AL1G49050' => 'aly', 'AL1G53810' => 'aly', 'AL1G61400' => 'aly', 'AL4G18580' => 'aly', 'AL5G12510' => 'aly', 'AL5G12540' => 'aly', 'AL6G43230' => 'aly', 'AL7G10370' => 'aly', 'AL7G19250' => 'aly', 'AL8G12240' => 'aly', 'AL8G18540' => 'aly', 'Aqoxy1G02409' => 'aox', 'Aqoxy2G03993' => 'aox', 'Aqoxy3G03357' => 'aox', 'Aqoxy4G00785' => 'aox', 'Aqoxy5G02598' => 'aox', 'Aqoxy6G00132' => 'aox', 'Aqoxy7G01776' => 'aox', 'Aqoxy7G02316' => 'aox', 'Aqoxy7G03973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.12AFKW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B8730' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27IQR1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3F75VG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3RE0GA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41TCQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.527VTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FIR39' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5W8UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DA38EV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ63HS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H1I32C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HC27T5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4M8AP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7N3CZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9UVDZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LS1NQA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT1D4B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SKC4TM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCFV76' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF9Q1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQWD9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1ZM88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WE07RT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YCK7VH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJE6Q6' => 'arhy', 'AT1G28240' => 'ath', 'AT1G34550' => 'ath', 'AT1G53040' => 'ath', 'AT2G02910' => 'ath', 'AT4G09630' => 'ath', 'AT4G38500' => 'ath', 'AT5G42660' => 'ath', 'AT5G46220' => 'ath', 'ATR0152G026' => 'atr', 'ATR0564G343' => 'atr', 'ATR0706G151' => 'atr', 'ATR0733G207' => 'atr', 'ATR0751G234' => 'atr', 'ATR0807G048' => 'atr', 'ATR1091G084' => 'atr', 'Atru.chr10.1229' => 'acertr', 'Atru.chr10.1230' => 'acertr', 'Atru.chr10.1874' => 'acertr', 'Atru.chr11.1808' => 'acertr', 'Atru.chr13.1795' => 'acertr', 'Atru.chr13.570' => 'acertr', 'Atru.chr2.2608' => 'acertr', 'Atru.chr2.2609' => 'acertr', 'Atru.chr5.3428' => 'acertr', 'Atru.chr8.1171' => 'acertr', 'AUR62004651' => 'cqu', 'AUR62008675' => 'cqu', 'AUR62010014' => 'cqu', 'AUR62013004' => 'cqu', 'AUR62014825' => 'cqu', 'AUR62015015' => 'cqu', 'AUR62015151' => 'cqu', 'AUR62017020' => 'cqu', 'AUR62019422' => 'cqu', 'AUR62023570' => 'cqu', 'AUR62025571' => 'cqu', 'AUR62029098' => 'cqu', 'AUR62033863' => 'cqu', 'AUR62034296' => 'cqu', 'AUR62040075' => 'cqu', 'BcaB02g07334' => 'bca', 'BcaB02g10575' => 'bca', 'BcaB03g12119' => 'bca', 'BcaB03g12120' => 'bca', 'BcaB03g13945' => 'bca', 'BcaB04g17123' => 'bca', 'BcaB04g17867' => 'bca', 'BcaB04g19839' => 'bca', 'BcaB07g30317' => 'bca', 'BcaB07g32432' => 'bca', 'BcaB07g33362' => 'bca', 'BcaB08g36611' => 'bca', 'BcaC01g00028' => 'bca', 'BcaC01g01356' => 'bca', 'BcaC01g02034' => 'bca', 'BcaC01g06051' => 'bca', 'BcaC03g16839' => 'bca', 'BcaC03g17176' => 'bca', 'BcaC05g26829' => 'bca', 'BcaC06g31490' => 'bca', 'BcaC06g35344' => 'bca', 'BcaC06g36570' => 'bca', 'BcaC07g37537' => 'bca', 'BcaC08g43491' => 'bca', 'BcaC08g43773' => 'bca', 'BcaNung00234' => 'bca', 'BcaNung01982' => 'bca', 'BcaNung03707' => 'bca', 'BcaNung06454' => 'bca', 'BolC2t10762H' => 'bol', 'BolC2t11191H' => 'bol', 'BolC3t14322H' => 'bol', 'BolC3t19747H' => 'bol', 'BolC3t21425H' => 'bol', 'BolC4t27800H' => 'bol', 'BolC5t31423H' => 'bol', 'BolC6t35951H' => 'bol', 'BolC6t36282H' => 'bol', 'BolC7t40678H' => 'bol', 'BolC7t40679H' => 'bol', 'BolC7t42222H' => 'bol', 'BolC7t43492H' => 'bol', 'BolC7t46785H' => 'bol', 'BolC8t47853H' => 'bol', 'BolC9t56805H' => 'bol', 'BraA02t08000Z' => 'bra', 'BraA02t08341Z' => 'bra', 'BraA03t10936Z' => 'bra', 'BraA03t15657Z' => 'bra', 'BraA04t18100Z' => 'bra', 'BraA05t20523Z' => 'bra', 'BraA06t23353Z' => 'bra', 'BraA06t27473Z' => 'bra', 'BraA06t27769Z' => 'bra', 'BraA07t28928Z' => 'bra', 'BraA08t32236Z' => 'bra', 'BraA08t32841Z' => 'bra', 'BraA08t34524Z' => 'bra', 'BraA09t38742Z' => 'bra', 'BraA09t39295Z' => 'bra', 'C02p47180' => 'bna', 'C02p50990' => 'bna', 'C03p19360' => 'bna', 'C03p74950' => 'bna', 'C03p91000' => 'bna', 'C04p63260' => 'bna', 'C05p27050' => 'bna', 'C06p08750' => 'bna', 'C06p11490' => 'bna', 'C07p02820' => 'bna', 'C07p17180' => 'bna', 'C07p29440' => 'bna', 'C07p63730' => 'bna', 'C09p39260' => 'bna', 'CAN.G1164.34' => 'can', 'CAN.G1164.39' => 'can', 'CAN.G1530.3' => 'can', 'CAN.G162.61' => 'can', 'CAN.G176.6' => 'can', 'CAN.G289.49' => 'can', 'CAN.G370.21' => 'can', 'CAN.G370.22' => 'can', 'CAN.G371.117' => 'can', 'CAN.G58.37' => 'can', 'CAN.G588.98' => 'can', 'CANSAT21G2266' => 'cansat', 'CANSAT25G2799' => 'cansat', 'CANSAT35G0862' => 'cansat', 'CANSAT35G1704' => 'cansat', 'CANSAT35G1760' => 'cansat', 'CANSAT56G3971' => 'cansat', 'CANSAT56G4116' => 'cansat', 'CANSAT80G1259' => 'cansat', 'CARHR027730' => 'chi', 'CARHR033880' => 'chi', 'CARHR043270' => 'chi', 'CARHR145330' => 'chi', 'CARHR145340' => 'chi', 'CARHR175570' => 'chi', 'CARHR181570' => 'chi', 'CARHR258470' => 'chi', 'CARHR260490' => 'chi', 'CARHR294220' => 'chi', 'Carub.0001s2668' => 'cru', 'Carub.0001s3257' => 'cru', 'Carub.0001s4220' => 'cru', 'Carub.0005s0179' => 'cru', 'Carub.0006s2807' => 'cru', 'Carub.0007s0039' => 'cru', 'Carub.0008s0169' => 'cru', 'Carub.0008s0636' => 'cru', 'Ca_00338_v3' => 'car', 'Ca_00542_v3' => 'car', 'Ca_01844_v3' => 'car', 'Ca_10611_v3' => 'car', 'Ca_13326_v3' => 'car', 'Ca_17944_v3' => 'car', 'Ca_18546_v3' => 'car', 'Ca_24219_v3' => 'car', 'Ca_29972_v3' => 'car', 'CBR_g3681' => 'cbr', 'CBR_g40021' => 'cbr', 'Cc01_g08140' => 'ccan', 'Cc02_g13410' => 'ccan', 'Cc02_g37480' => 'ccan', 'Cc05_g12030' => 'ccan', 'Cc09_g03370' => 'ccan', 'Cc09_g10300' => 'ccan', 'Cc10_g03530' => 'ccan', 'Cc10_g11380' => 'ccan', 'CDE01G0176' => 'cde', 'CDE02G0675' => 'cde', 'CDE02G0942' => 'cde', 'CDE02G1153' => 'cde', 'CDE02G4177' => 'cde', 'CDE04G2117' => 'cde', 'CDE04G2736' => 'cde', 'CDE08G1161' => 'cde', 'CDE09G1238' => 'cde', 'Cfa000467' => 'cfa', 'Cfa000947' => 'cfa', 'Cfa004969' => 'cfa', 'Cfa005284' => 'cfa', 'Cfa008993' => 'cfa', 'Cfa018187' => 'cfa', 'Cfa018454' => 'cfa', 'Cfa020585' => 'cfa', 'Ciclev10000424m.g' => 'ccl', 'Ciclev10003605m.g' => 'ccl', 'Ciclev10007828m.g' => 'ccl', 'Ciclev10014620m.g' => 'ccl', 'Ciclev10015169m.g' => 'ccl', 'Ciclev10018291m.g' => 'ccl', 'Ciclev10028256m.g' => 'ccl', 'Ciclev10033822m.g' => 'ccl', 'CiPaw.05G060300' => 'cil', 'CiPaw.05G085000' => 'cil', 'CiPaw.06G083700' => 'cil', 'CiPaw.06G120300' => 'cil', 'CiPaw.09G060500' => 'cil', 'CiPaw.09G123800' => 'cil', 'CiPaw.11G169700' => 'cil', 'CiPaw.12G118300' => 'cil', 'CiPaw.15G071000' => 'cil', 'CiPaw.15G081900' => 'cil', 'ClCG01G024610' => 'cla', 'ClCG03G006070' => 'cla', 'ClCG05G019250' => 'cla', 'ClCG09G009500' => 'cla', 'ClCG11G008200' => 'cla', 'ClCG11G018080' => 'cla', 'COL.COLO4_17373' => 'col', 'COL.COLO4_22994' => 'col', 'COL.COLO4_26389' => 'col', 'COL.COLO4_27170' => 'col', 'COL.COLO4_31074' => 'col', 'COL.COLO4_31465' => 'col', 'COL.COLO4_36438' => 'col', 'COL.COLO4_36439' => 'col', 'Cpa.g.c38781' => 'cpa', 'Cpa.g.sc128.12' => 'cpa', 'Cpa.g.sc166.7' => 'cpa', 'Cpa.g.sc166.8' => 'cpa', 'Cpa.g.sc20.111' => 'cpa', 'Cpa.g.sc27.31' => 'cpa', 'Cpa.g.sc64.36' => 'cpa', 'Cpa.g.sc64.37' => 'cpa', 'Cpa.g.sc66.49' => 'cpa', 'Cpa.g.sc80.64' => 'cpa', 'CsaV3_1G012320' => 'csa', 'CsaV3_2G008480' => 'csa', 'CsaV3_2G033450' => 'csa', 'CsaV3_3G044830' => 'csa', 'CsaV3_4G033710' => 'csa', 'CsaV3_6G051730' => 'csa', 'CsaV3_7G025350' => 'csa', 'CSS0001067' => 'camsi', 'CSS0005996' => 'camsi', 'CSS0006590' => 'camsi', 'CSS0009673' => 'camsi', 'CSS0010201' => 'camsi', 'CSS0010549' => 'camsi', 'CSS0011364' => 'camsi', 'CSS0014473' => 'camsi', 'CSS0014961' => 'camsi', 'CSS0020191' => 'camsi', 'CSS0021165' => 'camsi', 'CSS0022306' => 'camsi', 'CSS0030591' => 'camsi', 'CSS0030696' => 'camsi', 'CSS0032653' => 'camsi', 'CSS0037487' => 'camsi', 'CSS0041102' => 'camsi', 'CSS0041261' => 'camsi', 'CSS0046246' => 'camsi', 'CSS0049256' => 'camsi', 'DCAR_004075' => 'dca', 'DCAR_011538' => 'dca', 'DCAR_019553' => 'dca', 'DCAR_020952' => 'dca', 'DCAR_021739' => 'dca', 'DCAR_027407' => 'dca', 'DCAR_027913' => 'dca', 'DCAR_028066' => 'dca', 'Dinv05899' => 'din', 'Dinv07563' => 'din', 'Dinv08010' => 'din', 'Dinv14125' => 'din', 'Dinv20172' => 'din', 'Dinv30743' => 'din', 'Dinv31229' => 'din', 'Dinv34162' => 'din', 'Dinv36028' => 'din', 'Dinv39368' => 'din', 'Dinv40565' => 'din', 'Dinv41706' => 'din', 'Duzib052G0089' => 'dzi', 'Duzib116G0641' => 'dzi', 'Duzib132G0069' => 'dzi', 'Duzib132G1219' => 'dzi', 'Duzib147G0278' => 'dzi', 'Duzib160G0480' => 'dzi', 'Duzib170G0661' => 'dzi', 'Duzib177G0591' => 'dzi', 'Duzib187G1353' => 'dzi', 'Duzib192G0858' => 'dzi', 'Duzib192G0883' => 'dzi', 'Duzib213G0506' => 'dzi', 'Duzib235G0289' => 'dzi', 'Duzib251G0422' => 'dzi', 'ECA232G3898' => 'eca', 'ECA233G5950' => 'eca', 'ECA234G1699' => 'eca', 'ECA234G2421' => 'eca', 'ECA236G0426' => 'eca', 'ECA236G4331' => 'eca', 'ECA248G2573' => 'eca', 'EL10Ac1g00077' => 'bvu', 'EL10Ac1g01746' => 'bvu', 'EL10Ac2g03464' => 'bvu', 'EL10Ac4g08176' => 'bvu', 'EL10Ac7g17521' => 'bvu', 'EL10Ac8g20386' => 'bvu', 'EL10Ac9g21343' => 'bvu', 'EL10Ac9g22688' => 'bvu', 'Eucgr.B03434' => 'egr', 'Eucgr.D00618' => 'egr', 'Eucgr.E02395' => 'egr', 'Eucgr.F01129' => 'egr', 'Eucgr.F02622' => 'egr', 'Eucgr.F04207' => 'egr', 'FAN01G0570' => 'fan', 'FAN03G3351' => 'fan', 'FAN06G3702' => 'fan', 'FAN07G2149' => 'fan', 'FAN10G3758' => 'fan', 'FAN11G1170' => 'fan', 'FAN11G2050' => 'fan', 'FAN11G2724' => 'fan', 'FAN12G1700' => 'fan', 'FAN12G2028' => 'fan', 'FAN15G1160' => 'fan', 'FAN15G3063' => 'fan', 'FAN16G2540' => 'fan', 'FAN16G3077' => 'fan', 'FAN16G3624' => 'fan', 'FAN17G0221' => 'fan', 'FAN20G2492' => 'fan', 'FAN20G2905' => 'fan', 'FAN21G0548' => 'fan', 'FAN21G1300' => 'fan', 'FAN22G0077' => 'fan', 'FAN22G1315' => 'fan', 'FAN24G1280' => 'fan', 'FAN24G1445' => 'fan', 'FAN24G3527' => 'fan', 'FAN25G0464' => 'fan', 'FAN25G2885' => 'fan', 'FAN25G3270' => 'fan', 'FAN27G1101' => 'fan', 'FAN27G2846' => 'fan', 'FAN27G3524' => 'fan', 'FvH4_2g11770' => 'fve', 'FvH4_2g15630' => 'fve', 'FvH4_3g05570' => 'fve', 'FvH4_3g09110' => 'fve', 'FvH4_3g19940' => 'fve', 'FvH4_4g04821' => 'fve', 'FvH4_4g31480' => 'fve', 'FvH4_7g01740' => 'fve', 'Glyma.05G130400' => 'gma', 'Glyma.05G156400' => 'gma', 'Glyma.07G197000' => 'gma', 'Glyma.08G085151' => 'gma', 'Glyma.08G114500' => 'gma', 'Glyma.08G300400' => 'gma', 'Glyma.10G215800' => 'gma', 'Glyma.12G224400' => 'gma', 'Glyma.13G179300' => 'gma', 'Glyma.13G218151' => 'gma', 'Glyma.13G238800' => 'gma', 'Glyma.13G276900' => 'gma', 'Glyma.14G078200' => 'gma', 'Glyma.15G074500' => 'gma', 'Glyma.15G094100' => 'gma', 'Glyma.17G247200' => 'gma', 'Glyma.18G120100' => 'gma', 'Glyma.20G176000' => 'gma', 'Gohir.A01G063600' => 'ghi', 'Gohir.A01G170301' => 'ghi', 'Gohir.A02G060500' => 'ghi', 'Gohir.A05G133850' => 'ghi', 'Gohir.A05G161400' => 'ghi', 'Gohir.A06G012900' => 'ghi', 'Gohir.A06G035901' => 'ghi', 'Gohir.A06G127100' => 'ghi', 'Gohir.A06G210500' => 'ghi', 'Gohir.A08G008650' => 'ghi', 'Gohir.A09G072700' => 'ghi', 'Gohir.A09G088301' => 'ghi', 'Gohir.A10G040600' => 'ghi', 'Gohir.A12G036300' => 'ghi', 'Gohir.A12G143350' => 'ghi', 'Gohir.A12G165500' => 'ghi', 'Gohir.A13G145700' => 'ghi', 'Gohir.D01G050000' => 'ghi', 'Gohir.D01G051366' => 'ghi', 'Gohir.D01G161350' => 'ghi', 'Gohir.D02G065900' => 'ghi', 'Gohir.D05G164200' => 'ghi', 'Gohir.D05G355500' => 'ghi', 'Gohir.D06G010400' => 'ghi', 'Gohir.D06G111250' => 'ghi', 'Gohir.D06G132000' => 'ghi', 'Gohir.D06G210500' => 'ghi', 'Gohir.D07G165675' => 'ghi', 'Gohir.D08G062240' => 'ghi', 'Gohir.D08G086101' => 'ghi', 'Gohir.D08G138060' => 'ghi', 'Gohir.D09G072300' => 'ghi', 'Gohir.D10G041400' => 'ghi', 'Gohir.D11G191020' => 'ghi', 'Gohir.D11G212066' => 'ghi', 'Gohir.D12G036300' => 'ghi', 'Gohir.D12G168600' => 'ghi', 'Gohir.D13G150600' => 'ghi', 'Gorai.001G057300' => 'gra', 'Gorai.002G069900' => 'gra', 'Gorai.002G200000' => 'gra', 'Gorai.003G067600' => 'gra', 'Gorai.005G074800' => 'gra', 'Gorai.006G087300' => 'gra', 'Gorai.008G037500' => 'gra', 'Gorai.008G181400' => 'gra', 'Gorai.009G169400' => 'gra', 'Gorai.009G387900' => 'gra', 'Gorai.010G013300' => 'gra', 'Gorai.010G153800' => 'gra', 'Gorai.010G255800' => 'gra', 'Gorai.011G043700' => 'gra', 'Gorai.011G198900' => 'gra', 'Gorai.013G168400' => 'gra', 'GSVIVG01005212001' => 'vvi', 'GSVIVG01006163001' => 'vvi', 'GSVIVG01009625001' => 'vvi', 'GSVIVG01014338001' => 'vvi', 'GSVIVG01020005001' => 'vvi', 'GSVIVG01021450001' => 'vvi', 'GSVIVG01023975001' => 'vvi', 'GSVIVG01034490001' => 'vvi', 'HanXRQChr04g0112071' => 'han', 'HanXRQChr05g0131151' => 'han', 'HanXRQChr09g0262371' => 'han', 'HanXRQChr09g0268401' => 'han', 'HanXRQChr10g0279241' => 'han', 'HanXRQChr10g0297961' => 'han', 'HanXRQChr11g0326231' => 'han', 'HanXRQChr11g0328471' => 'han', 'HanXRQChr16g0507941' => 'han', 'HanXRQChr17g0560211' => 'han', 'Haze_02108' => 'cav', 'Haze_02428' => 'cav', 'Haze_05593' => 'cav', 'Haze_06448' => 'cav', 'Haze_09427' => 'cav', 'Haze_12022' => 'cav', 'Haze_17612' => 'cav', 'Haze_17928' => 'cav', 'Hma1.2p1_0032F.1_g019250' => 'hma', 'Hma1.2p1_0163F.1_g072690' => 'hma', 'Hma1.2p1_0265F.1_g106710' => 'hma', 'Hma1.2p1_0286F.1_g113970' => 'hma', 'Hma1.2p1_0363F.1_g136640' => 'hma', 'Hma1.2p1_0584F.1_g183470' => 'hma', 'Hma1.2p1_0885F.1_g232570' => 'hma', 'HPP92_006022' => 'vpl', 'HPP92_007320' => 'vpl', 'HPP92_011521' => 'vpl', 'HPP92_019387' => 'vpl', 'HPP92_024038' => 'vpl', 'Hund05891' => 'sun', 'Hund06450' => 'sun', 'Hund12053' => 'sun', 'Hund16800' => 'sun', 'Hund21222' => 'sun', 'Hund22896' => 'sun', 'Hund23746' => 'sun', 'Hund27083' => 'sun', 'Lalb_Chr02g0141831' => 'lal', 'Lalb_Chr02g0141841' => 'lal', 'Lalb_Chr05g0220411' => 'lal', 'Lalb_Chr06g0162081' => 'lal', 'Lalb_Chr09g0327651' => 'lal', 'Lalb_Chr13g0295051' => 'lal', 'Lalb_Chr15g0086801' => 'lal', 'Lalb_Chr16g0383781' => 'lal', 'Lalb_Chr16g0383791' => 'lal', 'Lalb_Chr18g0055441' => 'lal', 'Lalb_Chr18g0059611' => 'lal', 'Lalb_Chr20g0109661' => 'lal', 'Lalb_Chr20g0109831' => 'lal', 'Lalb_Chr20g0121871' => 'lal', 'Lalb_Chr22g0355361' => 'lal', 'Lalb_Chr25g0286371' => 'lal', 'Lj1A1187G43' => 'lonja', 'Lj1A1205T50' => 'lonja', 'Lj1A800G33' => 'lonja', 'Lj1C1187T7' => 'lonja', 'Lj1C843T11' => 'lonja', 'Lj1g0010940' => 'lja', 'Lj2A288T69' => 'lonja', 'Lj3g0024276' => 'lja', 'Lj4A47T76' => 'lonja', 'Lj4g0005805' => 'lja', 'Lj4g0006097' => 'lja', 'Lj4g0008528' => 'lja', 'Lj4g0024907' => 'lja', 'Lj5g0012472' => 'lja', 'Lj5g0018648' => 'lja', 'Lj6C789G1' => 'lonja', 'Lj6g0004000' => 'lja', 'Lj7A292G67' => 'lonja', 'Lj7A292T64' => 'lonja', 'Lj9A400T58' => 'lonja', 'Lsat_1_v5_gn_1_126181' => 'lsa', 'Lsat_1_v5_gn_4_123041' => 'lsa', 'Lsat_1_v5_gn_4_133620' => 'lsa', 'Lsat_1_v5_gn_4_53221' => 'lsa', 'Lsat_1_v5_gn_4_71961' => 'lsa', 'Lsat_1_v5_gn_7_105241' => 'lsa', 'Lsat_1_v5_gn_7_21361' => 'lsa', 'Lsat_1_v5_gn_7_28860' => 'lsa', 'Lsat_1_v5_gn_7_31260' => 'lsa', 'Lsat_1_v5_gn_8_52801' => 'lsa', 'Manes.02G191400' => 'mes', 'Manes.03G110100' => 'mes', 'Manes.04G071100' => 'mes', 'Manes.05G100500' => 'mes', 'Manes.05G164700' => 'mes', 'Manes.15G087000' => 'mes', 'Manes.15G121500' => 'mes', 'Manes.16G028300' => 'mes', 'Manes.17G046100' => 'mes', 'Manes.17G069800' => 'mes', 'Manes.18G100500' => 'mes', 'Mapoly0002s0109' => 'mpo', 'Mapoly0024s0007' => 'mpo', 'Mapoly0089s0032' => 'mpo', 'MBI04_g42241_MAGBIO' => 'mbi', 'MBI05_g11988_MAGBIO' => 'mbi', 'MBI05_g35452_MAGBIO' => 'mbi', 'MBI07_g30179_MAGBIO' => 'mbi', 'MBI07_g35859_MAGBIO' => 'mbi', 'MBI07_g35860_MAGBIO' => 'mbi', 'MBI07_g37166_MAGBIO' => 'mbi', 'MBI08_g18172_MAGBIO' => 'mbi', 'MBI09_g08441_MAGBIO' => 'mbi', 'MBI13_g01676_MAGBIO' => 'mbi', 'MBI14_g42955_MAGBIO' => 'mbi', 'MBI16_g13161_MAGBIO' => 'mbi', 'MBI17_g27204_MAGBIO' => 'mbi', 'MBI19_g21595_MAGBIO' => 'mbi', 'MD00G1148400' => 'mdo', 'MD02G1301200' => 'mdo', 'MD03G1227800' => 'mdo', 'MD05G1041100' => 'mdo', 'MD05G1124800' => 'mdo', 'MD05G1284000' => 'mdo', 'MD05G1338800' => 'mdo', 'MD05G1338900' => 'mdo', 'MD07G1022800' => 'mdo', 'MD10G1047500' => 'mdo', 'MD10G1127500' => 'mdo', 'MD10G1262300' => 'mdo', 'MD10G1293800' => 'mdo', 'MD16G1074300' => 'mdo', 'Medtr1g021670' => 'mtr', 'Medtr1g096320' => 'mtr', 'Medtr2g013690' => 'mtr', 'Medtr2g019450' => 'mtr', 'Medtr2g085170' => 'mtr', 'Medtr4g088785' => 'mtr', 'Medtr8g055930' => 'mtr', 'Medtr8g085850' => 'mtr', 'MELO3C002605.2' => 'cme', 'MELO3C003891.2' => 'cme', 'MELO3C004012.2' => 'cme', 'MELO3C007134.2' => 'cme', 'MELO3C008118.2' => 'cme', 'MELO3C016700.2' => 'cme', 'MELO3C024127.2' => 'cme', 'MELO3C033361.2' => 'cme', 'MELO3C033362.2' => 'cme', 'Migut.C00430' => 'egut', 'Migut.C01246' => 'egut', 'Migut.E00101' => 'egut', 'Migut.H01486' => 'egut', 'Migut.H01939' => 'egut', 'Migut.K00360' => 'egut', 'Migut.M00910' => 'egut', 'Migut.M01139' => 'egut', 'Migut.N02677' => 'egut', 'MSTRG.13252' => 'ama', 'MSTRG.14701' => 'ama', 'MSTRG.1521' => 'ama', 'MSTRG.15884' => 'ama', 'MSTRG.16242' => 'ama', 'MSTRG.22285' => 'ama', 'MSTRG.22444' => 'ama', 'MSTRG.2349' => 'ama', 'MSTRG.26308' => 'ama', 'MSTRG.28296' => 'ama', 'MSTRG.9895' => 'ama', 'Nitab4.5_0000110g0060' => 'nta', 'Nitab4.5_0000420g0130' => 'nta', 'Nitab4.5_0000422g0030' => 'nta', 'Nitab4.5_0000560g0180' => 'nta', 'Nitab4.5_0000703g0100' => 'nta', 'Nitab4.5_0000786g0200' => 'nta', 'Nitab4.5_0001336g0020' => 'nta', 'Nitab4.5_0001796g0030' => 'nta', 'Nitab4.5_0003348g0060' => 'nta', 'Nitab4.5_0003698g0040' => 'nta', 'Nitab4.5_0003942g0090' => 'nta', 'Nitab4.5_0004775g0070' => 'nta', 'Nitab4.5_0004864g0030' => 'nta', 'Nitab4.5_0005615g0020' => 'nta', 'Nitab4.5_0009288g0030' => 'nta', 'Nitab4.5_0009341g0010' => 'nta', 'Nitab4.5_0009535g0010' => 'nta', 'Nn1g03995' => 'nnu', 'Nn1g04100' => 'nnu', 'Nn1g06530' => 'nnu', 'Nn3g16404' => 'nnu', 'Nn3g17212' => 'nnu', 'Nn3g20776' => 'nnu', 'Nn3g21923' => 'nnu', 'Nn5g27737' => 'nnu', 'Nn5g29461' => 'nnu', 'Nn7g38355' => 'nnu', 'Nn8g39873' => 'nnu', 'Oeu000548.2' => 'oeu', 'Oeu004672.1' => 'oeu', 'Oeu015605.2' => 'oeu', 'Oeu016092.1' => 'oeu', 'Oeu017879.3' => 'oeu', 'Oeu024910.1' => 'oeu', 'Oeu028965.1' => 'oeu', 'Oeu031269.1' => 'oeu', 'Oeu031270.1' => 'oeu', 'Oeu032535.1' => 'oeu', 'Oeu034151.1' => 'oeu', 'Oeu034152.1' => 'oeu', 'Oeu034588.2' => 'oeu', 'Oeu050846.1' => 'oeu', 'Oeu050849.2' => 'oeu', 'Oeu051063.2' => 'oeu', 'Oeu052368.1' => 'oeu', 'Oeu052370.1' => 'oeu', 'Os01g0210400' => 'osa', 'Os01g0304300' => 'osa', 'Os01g0749100' => 'osa', 'Os02g0745800' => 'osa', 'Os03g0769050' => 'osa', 'Os05g0531500' => 'osa', 'Os06g0724300' => 'osa', 'Os11g0198100' => 'osa', 'Peaxi162Scf00069g01425' => 'pax', 'Peaxi162Scf00280g00811' => 'pax', 'Peaxi162Scf00310g00615' => 'pax', 'Peaxi162Scf00362g00542' => 'pax', 'Peaxi162Scf00461g00310' => 'pax', 'Peaxi162Scf00530g00118' => 'pax', 'Peaxi162Scf00541g00057' => 'pax', 'Peaxi162Scf00661g00017' => 'pax', 'Peaxi162Scf00926g00027' => 'pax', 'Peaxi162Scf01064g00263' => 'pax', 'Peaxi162Scf01211g00135' => 'pax', 'PGR004G2336' => 'pgr', 'PGR042G0327' => 'pgr', 'PGR042G1957' => 'pgr', 'PGR042G2003' => 'pgr', 'PGR042G3929' => 'pgr', 'PGR083G1137' => 'pgr', 'PGR083G1364' => 'pgr', 'PGSC0003DMG400003381' => 'stu', 'PGSC0003DMG400003417' => 'stu', 'PGSC0003DMG400008981' => 'stu', 'PGSC0003DMG400012417' => 'stu', 'PGSC0003DMG400012823' => 'stu', 'PGSC0003DMG400016885' => 'stu', 'PGSC0003DMG400022812' => 'stu', 'PGSC0003DMG400029726' => 'stu', 'PGSC0003DMG401009243' => 'stu', 'PGSC0003DMG401031505' => 'stu', 'PGSC0003DMG402031505' => 'stu', 'Phvul.001G017600' => 'pvu', 'Phvul.002G193500' => 'pvu', 'Phvul.002G228900' => 'pvu', 'Phvul.002G236800' => 'pvu', 'Phvul.003G049500' => 'pvu', 'Phvul.005G072000' => 'pvu', 'Phvul.006G164800' => 'pvu', 'Phvul.006G185100' => 'pvu', 'Phvul.007G090000' => 'pvu', 'Potri.001G399800' => 'ptr', 'Potri.002G149900' => 'ptr', 'Potri.004G044100' => 'ptr', 'Potri.004G177600' => 'ptr', 'Potri.009G138000' => 'ptr', 'Potri.010G094000' => 'ptr', 'Potri.011G053000' => 'ptr', 'Potri.011G119300' => 'ptr', 'Potri.013G113700' => 'ptr', 'Potri.018G107800' => 'ptr', 'Potri.019G084100' => 'ptr', 'Pp3c14_23720' => 'ppa', 'Pp3c16_6340' => 'ppa', 'Pp3c23_13420' => 'ppa', 'Pp3c24_2740' => 'ppa', 'Pp3c25_860' => 'ppa', 'Pp3c8_21750' => 'ppa', 'Prupe.1G273000' => 'ppe', 'Prupe.1G273700' => 'ppe', 'Prupe.1G274100' => 'ppe', 'Prupe.2G023300' => 'ppe', 'Prupe.4G048000' => 'ppe', 'Prupe.4G080400' => 'ppe', 'Prupe.4G181200' => 'ppe', 'Prupe.8G056900' => 'ppe', 'Prupe.8G168700' => 'ppe', 'Psat1g189080' => 'psa', 'Psat1g204760' => 'psa', 'Psat4g175560' => 'psa', 'Psat4g177720' => 'psa', 'Psat5g244240' => 'psa', 'Psat6g010720' => 'psa', 'Psat6g187200' => 'psa', 'Psat7g072040' => 'psa', 'PSO017G3501' => 'pso', 'PSO063G2148' => 'pso', 'PSO063G5608' => 'pso', 'PSO210G6392' => 'pso', 'PSO541G2319' => 'pso', 'PSO541G2836' => 'pso', 'PSO541G4012' => 'pso', 'PSO541G6253' => 'pso', 'PSO675G0580' => 'pso', 'PSO675G0856' => 'pso', 'PSO675G5635' => 'pso', 'PSO675G9157' => 'pso', 'PSO832G1660' => 'pso', 'PSO832G1969' => 'pso', 'QL02p007186' => 'qlo', 'QL02p033904' => 'qlo', 'QL03p064391' => 'qlo', 'QL05p040593' => 'qlo', 'QL05p058242' => 'qlo', 'QL08p021825' => 'qlo', 'QL11p004981' => 'qlo', 'RcHm_v2.0_Chr1g0318301' => 'rch', 'RcHm_v2.0_Chr4g0418501' => 'rch', 'RcHm_v2.0_Chr4g0439971' => 'rch', 'RcHm_v2.0_Chr5g0008541' => 'rch', 'RcHm_v2.0_Chr5g0014101' => 'rch', 'RcHm_v2.0_Chr5g0014131' => 'rch', 'RcHm_v2.0_Chr5g0033621' => 'rch', 'RcHm_v2.0_Chr6g0272041' => 'rch', 'RcHm_v2.0_Chr6g0278831' => 'rch', 'Rhsim02G0130400' => 'rsi', 'Rhsim02G0171100' => 'rsi', 'Rhsim05G0053000' => 'rsi', 'Rhsim05G0053100' => 'rsi', 'Rhsim06G0096500' => 'rsi', 'Rhsim06G0096600' => 'rsi', 'Rhsim06G0199100' => 'rsi', 'Rhsim12G0062300' => 'rsi', 'Rhsim12G0062800' => 'rsi', 'Sabra02G0118600' => 'sbr', 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'Solyc03g079860.2' => 'sly', 'Solyc04g079770.3' => 'sly', 'Solyc05g007430.4' => 'sly', 'Solyc07g063150.3' => 'sly', 'Solyc08g016620.3' => 'sly', 'Solyc09g057590.3' => 'sly', 'Solyc09g057600.1' => 'sly', 'Solyc10g009050.3' => 'sly', 'Solyc11g017420.2' => 'sly', 'Sopen01g053810' => 'spe', 'Sopen02g023040' => 'spe', 'Sopen03g002440' => 'spe', 'Sopen04g033350' => 'spe', 'Sopen05g003310' => 'spe', 'Sopen07g004050' => 'spe', 'Sopen07g031340' => 'spe', 'Sopen08g006990' => 'spe', 'Sopen10g004830' => 'spe', 'Sopen11g009370' => 'spe', 'Sp1g24450' => 'spa', 'Sp1g29670' => 'spa', 'Sp1g39600' => 'spa', 'Sp2g11080' => 'spa', 'Sp2g13970' => 'spa', 'Sp4g16130' => 'spa', 'Sp6g13080' => 'spa', 'Sp7g37270' => 'spa', 'TAR371G0065' => 'tar', 'TAR376G0340' => 'tar', 'TAR376G0435' => 'tar', 'TAR381G0002' => 'tar', 'TAR381G1236' => 'tar', 'TAR624G0055' => 'tar', 'TAR624G0324' => 'tar', 'TAR624G0696' => 'tar', 'TAR624G0906' => 'tar', 'TAR625G0107' => 'tar', 'TAR626G0015' => 'tar', 'TAR626G1356' => 'tar', 'TAR627G0888' => 'tar', 'TAR628G0399' => 'tar', 'TAR628G1327' => 'tar', 'TAR629G2831' => 'tar', 'TAR629G2874' => 'tar', 'TAR633G1432' => 'tar', 'TAR633G2771' => 'tar', 'THA.LOC104803394' => 'tha', 'THA.LOC104805153' => 'tha', 'THA.LOC104806784' => 'tha', 'THA.LOC104810473' => 'tha', 'THA.LOC104813100' => 'tha', 'THA.LOC104814215' => 'tha', 'THA.LOC104815554' => 'tha', 'THA.LOC104820544' => 'tha', 'THA.LOC104824754' => 'tha', 'THA.LOC104827717' => 'tha', 'Thecc.02G031400' => 'tca', 'Thecc.02G055900' => 'tca', 'Thecc.02G350800' => 'tca', 'Thecc.06G150900' => 'tca', 'Thecc.06G186600' => 'tca', 'Thecc.07G089600' => 'tca', 'Thecc.08G020400' => 'tca', 'Thecc.08G182100' => 'tca', 'Thhalv10000873m.g' => 'esa', 'Thhalv10004185m.g' => 'esa', 'Thhalv10006981m.g' => 'esa', 'Thhalv10007204m.g' => 'esa', 'Thhalv10011374m.g' => 'esa', 'Thhalv10013482m.g' => 'esa', 'Thhalv10017801m.g' => 'esa', 'Thhalv10024983m.g' => 'esa', 'TPR.G12072' => 'tpr', 'TPR.G15769' => 'tpr', 'TPR.G16504' => 'tpr', 'TPR.G16506' => 'tpr', 'TPR.G24345' => 'tpr', 'TPR.G26666' => 'tpr', 'TPR.G27320' => 'tpr', 'TPR.G31819' => 'tpr', 'TPR.G38879' => 'tpr', 'TPR.G39015' => 'tpr', 'TPR.G8819' => 'tpr', 'TWI09G0924' => 'twi', 'TWI12G0811' => 'twi', 'TWI12G1294' => 'twi', 'TWI31G0150' => 'twi', 'TWI36G1262' => 'twi', 'TWI38G1287' => 'twi', 'TWI38G1633' => 'twi', 'TWI38G1982' => 'twi', 'TWI39G0116' => 'twi', 'TWI60G1011' => 'twi', 'TWI63G0171' => 'twi', 'TWI73G0839' => 'twi', 'TWI79G1511' => 'twi', 'unitig_0.g915' => 'ugi', 'unitig_0.g916' => 'ugi', 'unitig_21.g20219' => 'ugi', 'unitig_21.g20416' => 'ugi', 'unitig_578.g16132' => 'ugi', 'unitig_578.g16718' => 'ugi', 'unitig_62.g23481' => 'ugi', 'unitig_744.g24535' => 'ugi', 'unitig_749.g13525' => 'ugi', 'vmacro01248' => 'vma', 'vmacro02290' => 'vma', 'vmacro10946' => 'vma', 'vmacro11865' => 'vma', 'vmacro12493' => 'vma', 'vmacro17322' => 'vma', 'vmacro21599' => 'vma', 'vmacro23041' => 'vma', 'VMungo0251G0004' => 'vmu', 'VMungo0251G2639' => 'vmu', 'VMungo0251G2967' => 'vmu', 'VMungo0540G0864' => 'vmu', 'VMungo0540G1569' => 'vmu', 'VMungo0647G0317' => 'vmu', 'VMungo0720G1373' => 'vmu', 'VMungo0720G1508' => 'vmu', 'VMungo1080G0485' => 'vmu', 'VMungo1215G3177' => 'vmu', 'Zm00001eb112600' => 'zma', 'Zm00001eb120220' => 'zma', 'Zm00001eb153240' => 'zma', 'Zm00001eb168880' => 'zma', 'Zm00001eb213920' => 'zma', 'Zm00001eb228280' => 'zma', 'Zm00001eb254580' => 'zma', 'Zm00001eb272180' => 'zma', 'Zm00001eb293190' => 'zma', 'Zm00001eb322930' => 'zma', 'Zm00001eb353360' => 'zma', 'Zm00001eb353390' => 'zma', 'Zm00001eb353430' => 'zma', 'Zm00001eb353440' => 'zma', 'Zm00001eb353780' => 'zma' ), 'gf_id' => 'HOM05D000499', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000499' ), 'data_identifier' => 'HOM05D000499', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000499', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1066', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p29780' => 'bna', 'A02p33180' => 'bna', 'A03p16470' => 'bna', 'A03p66010' => 'bna', 'A04p25970' => 'bna', 'A06p01270' => 'bna', 'A06p46080' => 'bna', 'A07p11400' => 'bna', 'A08p01840' => 'bna', 'A08p08230' => 'bna', 'A08p25740' => 'bna', 'A09p32070' => 'bna', 'A09p37830' => 'bna', 'A09p42840' => 'bna', 'A09p42850' => 'bna', 'Aa31LG10G2060' => 'aar', 'Aa31LG2G7410' => 'aar', 'Aa31LG6G10200' => 'aar', 'Aa31LG6G16680' => 'aar', 'Aa31LG6G8470' => 'aar', 'Aa31LG9G12730' => 'aar', 'Aa31LG9G13680' => 'aar', 'Aa31LG9G14920' => 'aar', 'Aa31LG9G6650' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4977' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5467' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3254' => 'aag', 'Actinidia02578' => 'ach', 'Actinidia07693' => 'ach', 'Actinidia08413' => 'ach', 'Actinidia08414' => 'ach', 'Actinidia15289' => 'ach', 'Actinidia19871' => 'ach', 'Actinidia21475' => 'ach', 'Actinidia22576' => 'ach', 'Actinidia28327' => 'ach', 'Actinidia32491' => 'ach', 'Actinidia39463' => 'ach', 'Actinidia39571' => 'ach', 'Ah.01g013750' => 'amhyb', 'Ah.01g023210' => 'amhyb', 'Ah.04g164850' => 'amhyb', 'Ah.05g178060' => 'amhyb', 'Ah.07g204270' => 'amhyb', 'Ah.07g208480' => 'amhyb', 'Ah.09g237410' => 'amhyb', 'Ah.14g089460' => 'amhyb', 'AL1G41790' => 'aly', 'AL1G49050' => 'aly', 'AL1G53810' => 'aly', 'AL1G61400' => 'aly', 'AL4G18580' => 'aly', 'AL5G12510' => 'aly', 'AL5G12540' => 'aly', 'AL6G43230' => 'aly', 'AL7G10370' => 'aly', 'AL7G19250' => 'aly', 'AL8G12240' => 'aly', 'AL8G18540' => 'aly', 'Aqoxy1G02409' => 'aox', 'Aqoxy2G03993' => 'aox', 'Aqoxy3G03357' => 'aox', 'Aqoxy4G00785' => 'aox', 'Aqoxy5G02598' => 'aox', 'Aqoxy6G00132' => 'aox', 'Aqoxy7G01776' => 'aox', 'Aqoxy7G02316' => 'aox', 'Aqoxy7G03973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.12AFKW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B8730' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27IQR1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3F75VG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3RE0GA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41TCQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.527VTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FIR39' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5W8UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DA38EV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ63HS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H1I32C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HC27T5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4M8AP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7N3CZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9UVDZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LS1NQA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT1D4B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SKC4TM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCFV76' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF9Q1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQWD9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1ZM88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WE07RT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YCK7VH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJE6Q6' => 'arhy', 'AT1G28240' => 'ath', 'AT1G34550' => 'ath', 'AT1G53040' => 'ath', 'AT2G02910' => 'ath', 'AT4G09630' => 'ath', 'AT4G38500' => 'ath', 'AT5G42660' => 'ath', 'AT5G46220' => 'ath', 'ATR0152G026' => 'atr', 'ATR0564G343' => 'atr', 'ATR0706G151' => 'atr', 'ATR0733G207' => 'atr', 'ATR0751G234' => 'atr', 'ATR0807G048' => 'atr', 'ATR1091G084' => 'atr', 'Atru.chr10.1229' => 'acertr', 'Atru.chr10.1230' => 'acertr', 'Atru.chr10.1874' => 'acertr', 'Atru.chr11.1808' => 'acertr', 'Atru.chr13.1795' => 'acertr', 'Atru.chr13.570' => 'acertr', 'Atru.chr2.2608' => 'acertr', 'Atru.chr2.2609' => 'acertr', 'Atru.chr5.3428' => 'acertr', 'Atru.chr8.1171' => 'acertr', 'AUR62004651' => 'cqu', 'AUR62008675' => 'cqu', 'AUR62010014' => 'cqu', 'AUR62013004' => 'cqu', 'AUR62014825' => 'cqu', 'AUR62015015' => 'cqu', 'AUR62015151' => 'cqu', 'AUR62017020' => 'cqu', 'AUR62019422' => 'cqu', 'AUR62023570' => 'cqu', 'AUR62025571' => 'cqu', 'AUR62029098' => 'cqu', 'AUR62033863' => 'cqu', 'AUR62034296' => 'cqu', 'AUR62040075' => 'cqu', 'BcaB02g07334' => 'bca', 'BcaB02g10575' => 'bca', 'BcaB03g12119' => 'bca', 'BcaB03g12120' => 'bca', 'BcaB03g13945' => 'bca', 'BcaB04g17123' => 'bca', 'BcaB04g17867' => 'bca', 'BcaB04g19839' => 'bca', 'BcaB07g30317' => 'bca', 'BcaB07g32432' => 'bca', 'BcaB07g33362' => 'bca', 'BcaB08g36611' => 'bca', 'BcaC01g00028' => 'bca', 'BcaC01g01356' => 'bca', 'BcaC01g02034' => 'bca', 'BcaC01g06051' => 'bca', 'BcaC03g16839' => 'bca', 'BcaC03g17176' => 'bca', 'BcaC05g26829' => 'bca', 'BcaC06g31490' => 'bca', 'BcaC06g35344' => 'bca', 'BcaC06g36570' => 'bca', 'BcaC07g37537' => 'bca', 'BcaC08g43491' => 'bca', 'BcaC08g43773' => 'bca', 'BcaNung00234' => 'bca', 'BcaNung01982' => 'bca', 'BcaNung03707' => 'bca', 'BcaNung06454' => 'bca', 'BolC2t10762H' => 'bol', 'BolC2t11191H' => 'bol', 'BolC3t14322H' => 'bol', 'BolC3t19747H' => 'bol', 'BolC3t21425H' => 'bol', 'BolC4t27800H' => 'bol', 'BolC5t31423H' => 'bol', 'BolC6t35951H' => 'bol', 'BolC6t36282H' => 'bol', 'BolC7t40678H' => 'bol', 'BolC7t40679H' => 'bol', 'BolC7t42222H' => 'bol', 'BolC7t43492H' => 'bol', 'BolC7t46785H' => 'bol', 'BolC8t47853H' => 'bol', 'BolC9t56805H' => 'bol', 'BraA02t08000Z' => 'bra', 'BraA02t08341Z' => 'bra', 'BraA03t10936Z' => 'bra', 'BraA03t15657Z' => 'bra', 'BraA04t18100Z' => 'bra', 'BraA05t20523Z' => 'bra', 'BraA06t23353Z' => 'bra', 'BraA06t27473Z' => 'bra', 'BraA06t27769Z' => 'bra', 'BraA07t28928Z' => 'bra', 'BraA08t32236Z' => 'bra', 'BraA08t32841Z' => 'bra', 'BraA08t34524Z' => 'bra', 'BraA09t38742Z' => 'bra', 'BraA09t39295Z' => 'bra', 'C02p47180' => 'bna', 'C02p50990' => 'bna', 'C03p19360' => 'bna', 'C03p74950' => 'bna', 'C03p91000' => 'bna', 'C04p63260' => 'bna', 'C05p27050' => 'bna', 'C06p08750' => 'bna', 'C06p11490' => 'bna', 'C07p02820' => 'bna', 'C07p17180' => 'bna', 'C07p29440' => 'bna', 'C07p63730' => 'bna', 'C09p39260' => 'bna', 'CAN.G1164.34' => 'can', 'CAN.G1164.39' => 'can', 'CAN.G1530.3' => 'can', 'CAN.G162.61' => 'can', 'CAN.G176.6' => 'can', 'CAN.G289.49' => 'can', 'CAN.G370.21' => 'can', 'CAN.G370.22' => 'can', 'CAN.G371.117' => 'can', 'CAN.G58.37' => 'can', 'CAN.G588.98' => 'can', 'CANSAT21G2266' => 'cansat', 'CANSAT25G2799' => 'cansat', 'CANSAT35G0862' => 'cansat', 'CANSAT35G1704' => 'cansat', 'CANSAT35G1760' => 'cansat', 'CANSAT56G3971' => 'cansat', 'CANSAT56G4116' => 'cansat', 'CANSAT80G1259' => 'cansat', 'CARHR027730' => 'chi', 'CARHR033880' => 'chi', 'CARHR043270' => 'chi', 'CARHR145330' => 'chi', 'CARHR145340' => 'chi', 'CARHR175570' => 'chi', 'CARHR181570' => 'chi', 'CARHR258470' => 'chi', 'CARHR260490' => 'chi', 'CARHR294220' => 'chi', 'Carub.0001s2668' => 'cru', 'Carub.0001s3257' => 'cru', 'Carub.0001s4220' => 'cru', 'Carub.0005s0179' => 'cru', 'Carub.0006s2807' => 'cru', 'Carub.0007s0039' => 'cru', 'Carub.0008s0169' => 'cru', 'Carub.0008s0636' => 'cru', 'Ca_00338_v3' => 'car', 'Ca_00542_v3' => 'car', 'Ca_01844_v3' => 'car', 'Ca_10611_v3' => 'car', 'Ca_13326_v3' => 'car', 'Ca_17944_v3' => 'car', 'Ca_18546_v3' => 'car', 'Ca_24219_v3' => 'car', 'Ca_29972_v3' => 'car', 'CBR_g3681' => 'cbr', 'CBR_g40021' => 'cbr', 'Cc01_g08140' => 'ccan', 'Cc02_g13410' => 'ccan', 'Cc02_g37480' => 'ccan', 'Cc05_g12030' => 'ccan', 'Cc09_g03370' => 'ccan', 'Cc09_g10300' => 'ccan', 'Cc10_g03530' => 'ccan', 'Cc10_g11380' => 'ccan', 'CDE01G0176' => 'cde', 'CDE02G0675' => 'cde', 'CDE02G0942' => 'cde', 'CDE02G1153' => 'cde', 'CDE02G4177' => 'cde', 'CDE04G2117' => 'cde', 'CDE04G2736' => 'cde', 'CDE08G1161' => 'cde', 'CDE09G1238' => 'cde', 'Cfa000467' => 'cfa', 'Cfa000947' => 'cfa', 'Cfa004969' => 'cfa', 'Cfa005284' => 'cfa', 'Cfa008993' => 'cfa', 'Cfa018187' => 'cfa', 'Cfa018454' => 'cfa', 'Cfa020585' => 'cfa', 'Ciclev10000424m.g' => 'ccl', 'Ciclev10003605m.g' => 'ccl', 'Ciclev10007828m.g' => 'ccl', 'Ciclev10014620m.g' => 'ccl', 'Ciclev10015169m.g' => 'ccl', 'Ciclev10018291m.g' => 'ccl', 'Ciclev10028256m.g' => 'ccl', 'Ciclev10033822m.g' => 'ccl', 'CiPaw.05G060300' => 'cil', 'CiPaw.05G085000' => 'cil', 'CiPaw.06G083700' => 'cil', 'CiPaw.06G120300' => 'cil', 'CiPaw.09G060500' => 'cil', 'CiPaw.09G123800' => 'cil', 'CiPaw.11G169700' => 'cil', 'CiPaw.12G118300' => 'cil', 'CiPaw.15G071000' => 'cil', 'CiPaw.15G081900' => 'cil', 'ClCG01G024610' => 'cla', 'ClCG03G006070' => 'cla', 'ClCG05G019250' => 'cla', 'ClCG09G009500' => 'cla', 'ClCG11G008200' => 'cla', 'ClCG11G018080' => 'cla', 'COL.COLO4_17373' => 'col', 'COL.COLO4_22994' => 'col', 'COL.COLO4_26389' => 'col', 'COL.COLO4_27170' => 'col', 'COL.COLO4_31074' => 'col', 'COL.COLO4_31465' => 'col', 'COL.COLO4_36438' => 'col', 'COL.COLO4_36439' => 'col', 'Cpa.g.c38781' => 'cpa', 'Cpa.g.sc128.12' => 'cpa', 'Cpa.g.sc166.7' => 'cpa', 'Cpa.g.sc166.8' => 'cpa', 'Cpa.g.sc20.111' => 'cpa', 'Cpa.g.sc27.31' => 'cpa', 'Cpa.g.sc64.36' => 'cpa', 'Cpa.g.sc64.37' => 'cpa', 'Cpa.g.sc66.49' => 'cpa', 'Cpa.g.sc80.64' => 'cpa', 'CsaV3_1G012320' => 'csa', 'CsaV3_2G008480' => 'csa', 'CsaV3_2G033450' => 'csa', 'CsaV3_3G044830' => 'csa', 'CsaV3_4G033710' => 'csa', 'CsaV3_6G051730' => 'csa', 'CsaV3_7G025350' => 'csa', 'CSS0001067' => 'camsi', 'CSS0005996' => 'camsi', 'CSS0006590' => 'camsi', 'CSS0009673' => 'camsi', 'CSS0010201' => 'camsi', 'CSS0010549' => 'camsi', 'CSS0011364' => 'camsi', 'CSS0014473' => 'camsi', 'CSS0014961' => 'camsi', 'CSS0020191' => 'camsi', 'CSS0021165' => 'camsi', 'CSS0022306' => 'camsi', 'CSS0030591' => 'camsi', 'CSS0030696' => 'camsi', 'CSS0032653' => 'camsi', 'CSS0037487' => 'camsi', 'CSS0041102' => 'camsi', 'CSS0041261' => 'camsi', 'CSS0046246' => 'camsi', 'CSS0049256' => 'camsi', 'DCAR_004075' => 'dca', 'DCAR_011538' => 'dca', 'DCAR_019553' => 'dca', 'DCAR_020952' => 'dca', 'DCAR_021739' => 'dca', 'DCAR_027407' => 'dca', 'DCAR_027913' => 'dca', 'DCAR_028066' => 'dca', 'Dinv05899' => 'din', 'Dinv07563' => 'din', 'Dinv08010' => 'din', 'Dinv14125' => 'din', 'Dinv20172' => 'din', 'Dinv30743' => 'din', 'Dinv31229' => 'din', 'Dinv34162' => 'din', 'Dinv36028' => 'din', 'Dinv39368' => 'din', 'Dinv40565' => 'din', 'Dinv41706' => 'din', 'Duzib052G0089' => 'dzi', 'Duzib116G0641' => 'dzi', 'Duzib132G0069' => 'dzi', 'Duzib132G1219' => 'dzi', 'Duzib147G0278' => 'dzi', 'Duzib160G0480' => 'dzi', 'Duzib170G0661' => 'dzi', 'Duzib177G0591' => 'dzi', 'Duzib187G1353' => 'dzi', 'Duzib192G0858' => 'dzi', 'Duzib192G0883' => 'dzi', 'Duzib213G0506' => 'dzi', 'Duzib235G0289' => 'dzi', 'Duzib251G0422' => 'dzi', 'ECA232G3898' => 'eca', 'ECA233G5950' => 'eca', 'ECA234G1699' => 'eca', 'ECA234G2421' => 'eca', 'ECA236G0426' => 'eca', 'ECA236G4331' => 'eca', 'ECA248G2573' => 'eca', 'EL10Ac1g00077' => 'bvu', 'EL10Ac1g01746' => 'bvu', 'EL10Ac2g03464' => 'bvu', 'EL10Ac4g08176' => 'bvu', 'EL10Ac7g17521' => 'bvu', 'EL10Ac8g20386' => 'bvu', 'EL10Ac9g21343' => 'bvu', 'EL10Ac9g22688' => 'bvu', 'Eucgr.B03434' => 'egr', 'Eucgr.D00618' => 'egr', 'Eucgr.E02395' => 'egr', 'Eucgr.F01129' => 'egr', 'Eucgr.F02622' => 'egr', 'Eucgr.F04207' => 'egr', 'FAN01G0570' => 'fan', 'FAN03G3351' => 'fan', 'FAN06G3702' => 'fan', 'FAN07G2149' => 'fan', 'FAN10G3758' => 'fan', 'FAN11G1170' => 'fan', 'FAN11G2050' => 'fan', 'FAN11G2724' => 'fan', 'FAN12G1700' => 'fan', 'FAN12G2028' => 'fan', 'FAN15G1160' => 'fan', 'FAN15G3063' => 'fan', 'FAN16G2540' => 'fan', 'FAN16G3077' => 'fan', 'FAN16G3624' => 'fan', 'FAN17G0221' => 'fan', 'FAN20G2492' => 'fan', 'FAN20G2905' => 'fan', 'FAN21G0548' => 'fan', 'FAN21G1300' => 'fan', 'FAN22G0077' => 'fan', 'FAN22G1315' => 'fan', 'FAN24G1280' => 'fan', 'FAN24G1445' => 'fan', 'FAN24G3527' => 'fan', 'FAN25G0464' => 'fan', 'FAN25G2885' => 'fan', 'FAN25G3270' => 'fan', 'FAN27G1101' => 'fan', 'FAN27G2846' => 'fan', 'FAN27G3524' => 'fan', 'FvH4_2g11770' => 'fve', 'FvH4_2g15630' => 'fve', 'FvH4_3g05570' => 'fve', 'FvH4_3g09110' => 'fve', 'FvH4_3g19940' => 'fve', 'FvH4_4g04821' => 'fve', 'FvH4_4g31480' => 'fve', 'FvH4_7g01740' => 'fve', 'Glyma.05G130400' => 'gma', 'Glyma.05G156400' => 'gma', 'Glyma.07G197000' => 'gma', 'Glyma.08G085151' => 'gma', 'Glyma.08G114500' => 'gma', 'Glyma.08G300400' => 'gma', 'Glyma.10G215800' => 'gma', 'Glyma.12G224400' => 'gma', 'Glyma.13G179300' => 'gma', 'Glyma.13G218151' => 'gma', 'Glyma.13G238800' => 'gma', 'Glyma.13G276900' => 'gma', 'Glyma.14G078200' => 'gma', 'Glyma.15G074500' => 'gma', 'Glyma.15G094100' => 'gma', 'Glyma.17G247200' => 'gma', 'Glyma.18G120100' => 'gma', 'Glyma.20G176000' => 'gma', 'Gohir.A01G063600' => 'ghi', 'Gohir.A01G170301' => 'ghi', 'Gohir.A02G060500' => 'ghi', 'Gohir.A05G133850' => 'ghi', 'Gohir.A05G161400' => 'ghi', 'Gohir.A06G012900' => 'ghi', 'Gohir.A06G035901' => 'ghi', 'Gohir.A06G127100' => 'ghi', 'Gohir.A06G210500' => 'ghi', 'Gohir.A08G008650' => 'ghi', 'Gohir.A09G072700' => 'ghi', 'Gohir.A09G088301' => 'ghi', 'Gohir.A10G040600' => 'ghi', 'Gohir.A12G036300' => 'ghi', 'Gohir.A12G143350' => 'ghi', 'Gohir.A12G165500' => 'ghi', 'Gohir.A13G145700' => 'ghi', 'Gohir.D01G050000' => 'ghi', 'Gohir.D01G051366' => 'ghi', 'Gohir.D01G161350' => 'ghi', 'Gohir.D02G065900' => 'ghi', 'Gohir.D05G164200' => 'ghi', 'Gohir.D05G355500' => 'ghi', 'Gohir.D06G010400' => 'ghi', 'Gohir.D06G111250' => 'ghi', 'Gohir.D06G132000' => 'ghi', 'Gohir.D06G210500' => 'ghi', 'Gohir.D07G165675' => 'ghi', 'Gohir.D08G062240' => 'ghi', 'Gohir.D08G086101' => 'ghi', 'Gohir.D08G138060' => 'ghi', 'Gohir.D09G072300' => 'ghi', 'Gohir.D10G041400' => 'ghi', 'Gohir.D11G191020' => 'ghi', 'Gohir.D11G212066' => 'ghi', 'Gohir.D12G036300' => 'ghi', 'Gohir.D12G168600' => 'ghi', 'Gohir.D13G150600' => 'ghi', 'Gorai.001G057300' => 'gra', 'Gorai.002G069900' => 'gra', 'Gorai.002G200000' => 'gra', 'Gorai.003G067600' => 'gra', 'Gorai.005G074800' => 'gra', 'Gorai.006G087300' => 'gra', 'Gorai.008G037500' => 'gra', 'Gorai.008G181400' => 'gra', 'Gorai.009G169400' => 'gra', 'Gorai.009G387900' => 'gra', 'Gorai.010G013300' => 'gra', 'Gorai.010G153800' => 'gra', 'Gorai.010G255800' => 'gra', 'Gorai.011G043700' => 'gra', 'Gorai.011G198900' => 'gra', 'Gorai.013G168400' => 'gra', 'GSVIVG01005212001' => 'vvi', 'GSVIVG01006163001' => 'vvi', 'GSVIVG01009625001' => 'vvi', 'GSVIVG01014338001' => 'vvi', 'GSVIVG01020005001' => 'vvi', 'GSVIVG01021450001' => 'vvi', 'GSVIVG01023975001' => 'vvi', 'GSVIVG01034490001' => 'vvi', 'HanXRQChr04g0112071' => 'han', 'HanXRQChr05g0131151' => 'han', 'HanXRQChr09g0262371' => 'han', 'HanXRQChr09g0268401' => 'han', 'HanXRQChr10g0279241' => 'han', 'HanXRQChr10g0297961' => 'han', 'HanXRQChr11g0326231' => 'han', 'HanXRQChr11g0328471' => 'han', 'HanXRQChr16g0507941' => 'han', 'HanXRQChr17g0560211' => 'han', 'Haze_02108' => 'cav', 'Haze_02428' => 'cav', 'Haze_05593' => 'cav', 'Haze_06448' => 'cav', 'Haze_09427' => 'cav', 'Haze_12022' => 'cav', 'Haze_17612' => 'cav', 'Haze_17928' => 'cav', 'Hma1.2p1_0032F.1_g019250' => 'hma', 'Hma1.2p1_0163F.1_g072690' => 'hma', 'Hma1.2p1_0265F.1_g106710' => 'hma', 'Hma1.2p1_0286F.1_g113970' => 'hma', 'Hma1.2p1_0363F.1_g136640' => 'hma', 'Hma1.2p1_0584F.1_g183470' => 'hma', 'Hma1.2p1_0885F.1_g232570' => 'hma', 'HPP92_006022' => 'vpl', 'HPP92_007320' => 'vpl', 'HPP92_011521' => 'vpl', 'HPP92_019387' => 'vpl', 'HPP92_024038' => 'vpl', 'Hund05891' => 'sun', 'Hund06450' => 'sun', 'Hund12053' => 'sun', 'Hund16800' => 'sun', 'Hund21222' => 'sun', 'Hund22896' => 'sun', 'Hund23746' => 'sun', 'Hund27083' => 'sun', 'Lalb_Chr02g0141831' => 'lal', 'Lalb_Chr02g0141841' => 'lal', 'Lalb_Chr05g0220411' => 'lal', 'Lalb_Chr06g0162081' => 'lal', 'Lalb_Chr09g0327651' => 'lal', 'Lalb_Chr13g0295051' => 'lal', 'Lalb_Chr15g0086801' => 'lal', 'Lalb_Chr16g0383781' => 'lal', 'Lalb_Chr16g0383791' => 'lal', 'Lalb_Chr18g0055441' => 'lal', 'Lalb_Chr18g0059611' => 'lal', 'Lalb_Chr20g0109661' => 'lal', 'Lalb_Chr20g0109831' => 'lal', 'Lalb_Chr20g0121871' => 'lal', 'Lalb_Chr22g0355361' => 'lal', 'Lalb_Chr25g0286371' => 'lal', 'Lj1A1187G43' => 'lonja', 'Lj1A1205T50' => 'lonja', 'Lj1A800G33' => 'lonja', 'Lj1C1187T7' => 'lonja', 'Lj1C843T11' => 'lonja', 'Lj1g0010940' => 'lja', 'Lj2A288T69' => 'lonja', 'Lj3g0024276' => 'lja', 'Lj4A47T76' => 'lonja', 'Lj4g0005805' => 'lja', 'Lj4g0006097' => 'lja', 'Lj4g0008528' => 'lja', 'Lj4g0024907' => 'lja', 'Lj5g0012472' => 'lja', 'Lj5g0018648' => 'lja', 'Lj6C789G1' => 'lonja', 'Lj6g0004000' => 'lja', 'Lj7A292G67' => 'lonja', 'Lj7A292T64' => 'lonja', 'Lj9A400T58' => 'lonja', 'Lsat_1_v5_gn_1_126181' => 'lsa', 'Lsat_1_v5_gn_4_123041' => 'lsa', 'Lsat_1_v5_gn_4_133620' => 'lsa', 'Lsat_1_v5_gn_4_53221' => 'lsa', 'Lsat_1_v5_gn_4_71961' => 'lsa', 'Lsat_1_v5_gn_7_105241' => 'lsa', 'Lsat_1_v5_gn_7_21361' => 'lsa', 'Lsat_1_v5_gn_7_28860' => 'lsa', 'Lsat_1_v5_gn_7_31260' => 'lsa', 'Lsat_1_v5_gn_8_52801' => 'lsa', 'Manes.02G191400' => 'mes', 'Manes.03G110100' => 'mes', 'Manes.04G071100' => 'mes', 'Manes.05G100500' => 'mes', 'Manes.05G164700' => 'mes', 'Manes.15G087000' => 'mes', 'Manes.15G121500' => 'mes', 'Manes.16G028300' => 'mes', 'Manes.17G046100' => 'mes', 'Manes.17G069800' => 'mes', 'Manes.18G100500' => 'mes', 'Mapoly0002s0109' => 'mpo', 'Mapoly0024s0007' => 'mpo', 'Mapoly0089s0032' => 'mpo', 'MBI04_g42241_MAGBIO' => 'mbi', 'MBI05_g11988_MAGBIO' => 'mbi', 'MBI05_g35452_MAGBIO' => 'mbi', 'MBI07_g30179_MAGBIO' => 'mbi', 'MBI07_g35859_MAGBIO' => 'mbi', 'MBI07_g35860_MAGBIO' => 'mbi', 'MBI07_g37166_MAGBIO' => 'mbi', 'MBI08_g18172_MAGBIO' => 'mbi', 'MBI09_g08441_MAGBIO' => 'mbi', 'MBI13_g01676_MAGBIO' => 'mbi', 'MBI14_g42955_MAGBIO' => 'mbi', 'MBI16_g13161_MAGBIO' => 'mbi', 'MBI17_g27204_MAGBIO' => 'mbi', 'MBI19_g21595_MAGBIO' => 'mbi', 'MD00G1148400' => 'mdo', 'MD02G1301200' => 'mdo', 'MD03G1227800' => 'mdo', 'MD05G1041100' => 'mdo', 'MD05G1124800' => 'mdo', 'MD05G1284000' => 'mdo', 'MD05G1338800' => 'mdo', 'MD05G1338900' => 'mdo', 'MD07G1022800' => 'mdo', 'MD10G1047500' => 'mdo', 'MD10G1127500' => 'mdo', 'MD10G1262300' => 'mdo', 'MD10G1293800' => 'mdo', 'MD16G1074300' => 'mdo', 'Medtr1g021670' => 'mtr', 'Medtr1g096320' => 'mtr', 'Medtr2g013690' => 'mtr', 'Medtr2g019450' => 'mtr', 'Medtr2g085170' => 'mtr', 'Medtr4g088785' => 'mtr', 'Medtr8g055930' => 'mtr', 'Medtr8g085850' => 'mtr', 'MELO3C002605.2' => 'cme', 'MELO3C003891.2' => 'cme', 'MELO3C004012.2' => 'cme', 'MELO3C007134.2' => 'cme', 'MELO3C008118.2' => 'cme', 'MELO3C016700.2' => 'cme', 'MELO3C024127.2' => 'cme', 'MELO3C033361.2' => 'cme', 'MELO3C033362.2' => 'cme', 'Migut.C00430' => 'egut', 'Migut.C01246' => 'egut', 'Migut.E00101' => 'egut', 'Migut.H01486' => 'egut', 'Migut.H01939' => 'egut', 'Migut.K00360' => 'egut', 'Migut.M00910' => 'egut', 'Migut.M01139' => 'egut', 'Migut.N02677' => 'egut', 'MSTRG.13252' => 'ama', 'MSTRG.14701' => 'ama', 'MSTRG.1521' => 'ama', 'MSTRG.15884' => 'ama', 'MSTRG.16242' => 'ama', 'MSTRG.22285' => 'ama', 'MSTRG.22444' => 'ama', 'MSTRG.2349' => 'ama', 'MSTRG.26308' => 'ama', 'MSTRG.28296' => 'ama', 'MSTRG.9895' => 'ama', 'Nitab4.5_0000110g0060' => 'nta', 'Nitab4.5_0000420g0130' => 'nta', 'Nitab4.5_0000422g0030' => 'nta', 'Nitab4.5_0000560g0180' => 'nta', 'Nitab4.5_0000703g0100' => 'nta', 'Nitab4.5_0000786g0200' => 'nta', 'Nitab4.5_0001336g0020' => 'nta', 'Nitab4.5_0001796g0030' => 'nta', 'Nitab4.5_0003348g0060' => 'nta', 'Nitab4.5_0003698g0040' => 'nta', 'Nitab4.5_0003942g0090' => 'nta', 'Nitab4.5_0004775g0070' => 'nta', 'Nitab4.5_0004864g0030' => 'nta', 'Nitab4.5_0005615g0020' => 'nta', 'Nitab4.5_0009288g0030' => 'nta', 'Nitab4.5_0009341g0010' => 'nta', 'Nitab4.5_0009535g0010' => 'nta', 'Nn1g03995' => 'nnu', 'Nn1g04100' => 'nnu', 'Nn1g06530' => 'nnu', 'Nn3g16404' => 'nnu', 'Nn3g17212' => 'nnu', 'Nn3g20776' => 'nnu', 'Nn3g21923' => 'nnu', 'Nn5g27737' => 'nnu', 'Nn5g29461' => 'nnu', 'Nn7g38355' => 'nnu', 'Nn8g39873' => 'nnu', 'Oeu000548.2' => 'oeu', 'Oeu004672.1' => 'oeu', 'Oeu015605.2' => 'oeu', 'Oeu016092.1' => 'oeu', 'Oeu017879.3' => 'oeu', 'Oeu024910.1' => 'oeu', 'Oeu028965.1' => 'oeu', 'Oeu031269.1' => 'oeu', 'Oeu031270.1' => 'oeu', 'Oeu032535.1' => 'oeu', 'Oeu034151.1' => 'oeu', 'Oeu034152.1' => 'oeu', 'Oeu034588.2' => 'oeu', 'Oeu050846.1' => 'oeu', 'Oeu050849.2' => 'oeu', 'Oeu051063.2' => 'oeu', 'Oeu052368.1' => 'oeu', 'Oeu052370.1' => 'oeu', 'Os01g0210400' => 'osa', 'Os01g0304300' => 'osa', 'Os01g0749100' => 'osa', 'Os02g0745800' => 'osa', 'Os03g0769050' => 'osa', 'Os05g0531500' => 'osa', 'Os06g0724300' => 'osa', 'Os11g0198100' => 'osa', 'Peaxi162Scf00069g01425' => 'pax', 'Peaxi162Scf00280g00811' => 'pax', 'Peaxi162Scf00310g00615' => 'pax', 'Peaxi162Scf00362g00542' => 'pax', 'Peaxi162Scf00461g00310' => 'pax', 'Peaxi162Scf00530g00118' => 'pax', 'Peaxi162Scf00541g00057' => 'pax', 'Peaxi162Scf00661g00017' => 'pax', 'Peaxi162Scf00926g00027' => 'pax', 'Peaxi162Scf01064g00263' => 'pax', 'Peaxi162Scf01211g00135' => 'pax', 'PGR004G2336' => 'pgr', 'PGR042G0327' => 'pgr', 'PGR042G1957' => 'pgr', 'PGR042G2003' => 'pgr', 'PGR042G3929' => 'pgr', 'PGR083G1137' => 'pgr', 'PGR083G1364' => 'pgr', 'PGSC0003DMG400003381' => 'stu', 'PGSC0003DMG400003417' => 'stu', 'PGSC0003DMG400008981' => 'stu', 'PGSC0003DMG400012417' => 'stu', 'PGSC0003DMG400012823' => 'stu', 'PGSC0003DMG400016885' => 'stu', 'PGSC0003DMG400022812' => 'stu', 'PGSC0003DMG400029726' => 'stu', 'PGSC0003DMG401009243' => 'stu', 'PGSC0003DMG401031505' => 'stu', 'PGSC0003DMG402031505' => 'stu', 'Phvul.001G017600' => 'pvu', 'Phvul.002G193500' => 'pvu', 'Phvul.002G228900' => 'pvu', 'Phvul.002G236800' => 'pvu', 'Phvul.003G049500' => 'pvu', 'Phvul.005G072000' => 'pvu', 'Phvul.006G164800' => 'pvu', 'Phvul.006G185100' => 'pvu', 'Phvul.007G090000' => 'pvu', 'Potri.001G399800' => 'ptr', 'Potri.002G149900' => 'ptr', 'Potri.004G044100' => 'ptr', 'Potri.004G177600' => 'ptr', 'Potri.009G138000' => 'ptr', 'Potri.010G094000' => 'ptr', 'Potri.011G053000' => 'ptr', 'Potri.011G119300' => 'ptr', 'Potri.013G113700' => 'ptr', 'Potri.018G107800' => 'ptr', 'Potri.019G084100' => 'ptr', 'Pp3c14_23720' => 'ppa', 'Pp3c16_6340' => 'ppa', 'Pp3c23_13420' => 'ppa', 'Pp3c24_2740' => 'ppa', 'Pp3c25_860' => 'ppa', 'Pp3c8_21750' => 'ppa', 'Prupe.1G273000' => 'ppe', 'Prupe.1G273700' => 'ppe', 'Prupe.1G274100' => 'ppe', 'Prupe.2G023300' => 'ppe', 'Prupe.4G048000' => 'ppe', 'Prupe.4G080400' => 'ppe', 'Prupe.4G181200' => 'ppe', 'Prupe.8G056900' => 'ppe', 'Prupe.8G168700' => 'ppe', 'Psat1g189080' => 'psa', 'Psat1g204760' => 'psa', 'Psat4g175560' => 'psa', 'Psat4g177720' => 'psa', 'Psat5g244240' => 'psa', 'Psat6g010720' => 'psa', 'Psat6g187200' => 'psa', 'Psat7g072040' => 'psa', 'PSO017G3501' => 'pso', 'PSO063G2148' => 'pso', 'PSO063G5608' => 'pso', 'PSO210G6392' => 'pso', 'PSO541G2319' => 'pso', 'PSO541G2836' => 'pso', 'PSO541G4012' => 'pso', 'PSO541G6253' => 'pso', 'PSO675G0580' => 'pso', 'PSO675G0856' => 'pso', 'PSO675G5635' => 'pso', 'PSO675G9157' => 'pso', 'PSO832G1660' => 'pso', 'PSO832G1969' => 'pso', 'QL02p007186' => 'qlo', 'QL02p033904' => 'qlo', 'QL03p064391' => 'qlo', 'QL05p040593' => 'qlo', 'QL05p058242' => 'qlo', 'QL08p021825' => 'qlo', 'QL11p004981' => 'qlo', 'RcHm_v2.0_Chr1g0318301' => 'rch', 'RcHm_v2.0_Chr4g0418501' => 'rch', 'RcHm_v2.0_Chr4g0439971' => 'rch', 'RcHm_v2.0_Chr5g0008541' => 'rch', 'RcHm_v2.0_Chr5g0014101' => 'rch', 'RcHm_v2.0_Chr5g0014131' => 'rch', 'RcHm_v2.0_Chr5g0033621' => 'rch', 'RcHm_v2.0_Chr6g0272041' => 'rch', 'RcHm_v2.0_Chr6g0278831' => 'rch', 'Rhsim02G0130400' => 'rsi', 'Rhsim02G0171100' => 'rsi', 'Rhsim05G0053000' => 'rsi', 'Rhsim05G0053100' => 'rsi', 'Rhsim06G0096500' => 'rsi', 'Rhsim06G0096600' => 'rsi', 'Rhsim06G0199100' => 'rsi', 'Rhsim12G0062300' => 'rsi', 'Rhsim12G0062800' => 'rsi', 'Sabra02G0118600' => 'sbr', 'Sabra04G0027300' => 'sbr', 'Sabra04G0119500' => 'sbr', 'Sabra08G0112500' => 'sbr', 'Sabra11G0036800' => 'sbr', 'Sabra11G0103800' => 'sbr', 'Sabra13G0096300' => 'sbr', 'Sabra16G0262300' => 'sbr', 'Sabra18G0091700' => 'sbr', 'Sabra19G0095400' => 'sbr', 'SalBow6G3080' => 'sbo', 'SalBow7G1157' => 'sbo', 'SalBow7G2123' => 'sbo', 'SalBow7G2285' => 'sbo', 'SalBow7G3537' => 'sbo', 'SalBow8G2947' => 'sbo', 'SalBow8G4463' => 'sbo', 'SalBow8G5466' => 'sbo', 'Sc01g0001750' => 'sci', 'Sc02g0006640' => 'sci', 'Sc02g0006670' => 'sci', 'Sc04g0008220' => 'sci', 'Sc05g0006190' => 'sci', 'Sc08g0002760' => 'sci', 'Sc17g0006170' => 'sci', 'Sc22g0002050' => 'sci', 'Sc23g0001190' => 'sci', 'Sc24g0000980' => 'sci', 'Sed0006245' => 'sed', 'Sed0007543' => 'sed', 'Sed0009411' => 'sed', 'Sed0010765' => 'sed', 'Sed0012944' => 'sed', 'Sed0014682' => 'sed', 'Sed0016174' => 'sed', 'Sed0016796' => 'sed', 'Sed0020317' => 'sed', 'Sed0021467' => 'sed', 'SEGI_01316' => 'sgi', 'SEGI_03374' => 'sgi', 'SEGI_16265' => 'sgi', 'SEGI_18569' => 'sgi', 'SEGI_20351' => 'sgi', 'SEGI_26395' => 'sgi', 'SEGI_29469' => 'sgi', 'SEGI_34771' => 'sgi', 'SEGI_36769' => 'sgi', 'SEGI_37139' => 'sgi', 'SGA_v2.0_scaffold100G29687' => 'sas', 'SGA_v2.0_scaffold118G32472' => 'sas', 'SGA_v2.0_scaffold14G07051' => 'sas', 'SGA_v2.0_scaffold183G39845' => 'sas', 'SGA_v2.0_scaffold1G00174' => 'sas', 'SGA_v2.0_scaffold22G09714' => 'sas', 'SGA_v2.0_scaffold333G48992' => 'sas', 'SGA_v2.0_scaffold46G17491' => 'sas', 'SGA_v2.0_scaffold49G18294' => 'sas', 'SGA_v2.0_scaffold63G21658' => 'sas', 'SHI01741' => 'shi', 'SHI05771' => 'shi', 'SHI18077' => 'shi', 'SHI20525' => 'shi', 'SHI20527' => 'shi', 'SHI20528' => 'shi', 'SMO172G0185' => 'smo', 'SMO198G0020' => 'smo', 'SMO351G0006' => 'smo', 'SMO356G0118' => 'smo', 'SMO358G0296' => 'smo', 'SMO367G0079' => 'smo', 'SMO367G1277' => 'smo', 'Solyc01g014220.3' => 'sly', 'Solyc01g111770.2' => 'sly', 'Solyc02g078180.3' => 'sly', 'Solyc03g006430.3' => 'sly', 'Solyc03g006456.1' => 'sly', 'Solyc03g079860.2' => 'sly', 'Solyc04g079770.3' => 'sly', 'Solyc05g007430.4' => 'sly', 'Solyc07g063150.3' => 'sly', 'Solyc08g016620.3' => 'sly', 'Solyc09g057590.3' => 'sly', 'Solyc09g057600.1' => 'sly', 'Solyc10g009050.3' => 'sly', 'Solyc11g017420.2' => 'sly', 'Sopen01g053810' => 'spe', 'Sopen02g023040' => 'spe', 'Sopen03g002440' => 'spe', 'Sopen04g033350' => 'spe', 'Sopen05g003310' => 'spe', 'Sopen07g004050' => 'spe', 'Sopen07g031340' => 'spe', 'Sopen08g006990' => 'spe', 'Sopen10g004830' => 'spe', 'Sopen11g009370' => 'spe', 'Sp1g24450' => 'spa', 'Sp1g29670' => 'spa', 'Sp1g39600' => 'spa', 'Sp2g11080' => 'spa', 'Sp2g13970' => 'spa', 'Sp4g16130' => 'spa', 'Sp6g13080' => 'spa', 'Sp7g37270' => 'spa', 'TAR371G0065' => 'tar', 'TAR376G0340' => 'tar', 'TAR376G0435' => 'tar', 'TAR381G0002' => 'tar', 'TAR381G1236' => 'tar', 'TAR624G0055' => 'tar', 'TAR624G0324' => 'tar', 'TAR624G0696' => 'tar', 'TAR624G0906' => 'tar', 'TAR625G0107' => 'tar', 'TAR626G0015' => 'tar', 'TAR626G1356' => 'tar', 'TAR627G0888' => 'tar', 'TAR628G0399' => 'tar', 'TAR628G1327' => 'tar', 'TAR629G2831' => 'tar', 'TAR629G2874' => 'tar', 'TAR633G1432' => 'tar', 'TAR633G2771' => 'tar', 'THA.LOC104803394' => 'tha', 'THA.LOC104805153' => 'tha', 'THA.LOC104806784' => 'tha', 'THA.LOC104810473' => 'tha', 'THA.LOC104813100' => 'tha', 'THA.LOC104814215' => 'tha', 'THA.LOC104815554' => 'tha', 'THA.LOC104820544' => 'tha', 'THA.LOC104824754' => 'tha', 'THA.LOC104827717' => 'tha', 'Thecc.02G031400' => 'tca', 'Thecc.02G055900' => 'tca', 'Thecc.02G350800' => 'tca', 'Thecc.06G150900' => 'tca', 'Thecc.06G186600' => 'tca', 'Thecc.07G089600' => 'tca', 'Thecc.08G020400' => 'tca', 'Thecc.08G182100' => 'tca', 'Thhalv10000873m.g' => 'esa', 'Thhalv10004185m.g' => 'esa', 'Thhalv10006981m.g' => 'esa', 'Thhalv10007204m.g' => 'esa', 'Thhalv10011374m.g' => 'esa', 'Thhalv10013482m.g' => 'esa', 'Thhalv10017801m.g' => 'esa', 'Thhalv10024983m.g' => 'esa', 'TPR.G12072' => 'tpr', 'TPR.G15769' => 'tpr', 'TPR.G16504' => 'tpr', 'TPR.G16506' => 'tpr', 'TPR.G24345' => 'tpr', 'TPR.G26666' => 'tpr', 'TPR.G27320' => 'tpr', 'TPR.G31819' => 'tpr', 'TPR.G38879' => 'tpr', 'TPR.G39015' => 'tpr', 'TPR.G8819' => 'tpr', 'TWI09G0924' => 'twi', 'TWI12G0811' => 'twi', 'TWI12G1294' => 'twi', 'TWI31G0150' => 'twi', 'TWI36G1262' => 'twi', 'TWI38G1287' => 'twi', 'TWI38G1633' => 'twi', 'TWI38G1982' => 'twi', 'TWI39G0116' => 'twi', 'TWI60G1011' => 'twi', 'TWI63G0171' => 'twi', 'TWI73G0839' => 'twi', 'TWI79G1511' => 'twi', 'unitig_0.g915' => 'ugi', 'unitig_0.g916' => 'ugi', 'unitig_21.g20219' => 'ugi', 'unitig_21.g20416' => 'ugi', 'unitig_578.g16132' => 'ugi', 'unitig_578.g16718' => 'ugi', 'unitig_62.g23481' => 'ugi', 'unitig_744.g24535' => 'ugi', 'unitig_749.g13525' => 'ugi', 'vmacro01248' => 'vma', 'vmacro02290' => 'vma', 'vmacro10946' => 'vma', 'vmacro11865' => 'vma', 'vmacro12493' => 'vma', 'vmacro17322' => 'vma', 'vmacro21599' => 'vma', 'vmacro23041' => 'vma', 'VMungo0251G0004' => 'vmu', 'VMungo0251G2639' => 'vmu', 'VMungo0251G2967' => 'vmu', 'VMungo0540G0864' => 'vmu', 'VMungo0540G1569' => 'vmu', 'VMungo0647G0317' => 'vmu', 'VMungo0720G1373' => 'vmu', 'VMungo0720G1508' => 'vmu', 'VMungo1080G0485' => 'vmu', 'VMungo1215G3177' => 'vmu', 'Zm00001eb112600' => 'zma', 'Zm00001eb120220' => 'zma', 'Zm00001eb153240' => 'zma', 'Zm00001eb168880' => 'zma', 'Zm00001eb213920' => 'zma', 'Zm00001eb228280' => 'zma', 'Zm00001eb254580' => 'zma', 'Zm00001eb272180' => 'zma', 'Zm00001eb293190' => 'zma', 'Zm00001eb322930' => 'zma', 'Zm00001eb353360' => 'zma', 'Zm00001eb353390' => 'zma', 'Zm00001eb353430' => 'zma', 'Zm00001eb353440' => 'zma', 'Zm00001eb353780' => 'zma' ) $gf_id = 'HOM05D000499' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000499' ) $data_identifier = 'HOM05D000499' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 29, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 12, 'amhyb' => (int) 8, 'aly' => (int) 12, 'aox' => (int) 9, 'arhy' => (int) 26, 'ath' => (int) 8, 'atr' => (int) 7, 'acertr' => (int) 10, 'cqu' => (int) 15, 'bca' => (int) 29, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 11, 'cansat' => (int) 8, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 9, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 8, 'cpa' => (int) 10, 'csa' => (int) 7, 'camsi' => (int) 20, 'dca' => (int) 8, 'din' => (int) 12, 'dzi' => (int) 14, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 6, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 38, 'gra' => (int) 16, 'vvi' => (int) 8, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 5, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 11, 'lja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 11, 'mpo' => (int) 3, 'mbi' => (int) 14, 'mdo' => (int) 14, 'mtr' => (int) 8, 'cme' => (int) 9, 'egut' => (int) 9, 'ama' => (int) 11, 'nta' => (int) 17, 'nnu' => (int) 11, 'oeu' => (int) 18, 'osa' => (int) 8, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 6, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 9, 'rsi' => (int) 9, 'sbr' => (int) 10, 'sbo' => (int) 8, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 10, 'sas' => (int) 10, 'shi' => (int) 6, 'smo' => (int) 7, 'sly' => (int) 14, 'spe' => (int) 10, 'spa' => (int) 8, 'tar' => (int) 19, 'tha' => (int) 10, 'tca' => (int) 8, 'esa' => (int) 8, 'tpr' => (int) 11, 'twi' => (int) 13, 'ugi' => (int) 9, 'vma' => (int) 8, 'vmu' => (int) 10, 'zma' => (int) 15 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb353780' $species_info = array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ) $local_species = 'chi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000499', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1066', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p29780' => 'bna', 'A02p33180' => 'bna', 'A03p16470' => 'bna', 'A03p66010' => 'bna', 'A04p25970' => 'bna', 'A06p01270' => 'bna', 'A06p46080' => 'bna', 'A07p11400' => 'bna', 'A08p01840' => 'bna', 'A08p08230' => 'bna', 'A08p25740' => 'bna', 'A09p32070' => 'bna', 'A09p37830' => 'bna', 'A09p42840' => 'bna', 'A09p42850' => 'bna', 'Aa31LG10G2060' => 'aar', 'Aa31LG2G7410' => 'aar', 'Aa31LG6G10200' => 'aar', 'Aa31LG6G16680' => 'aar', 'Aa31LG6G8470' => 'aar', 'Aa31LG9G12730' => 'aar', 'Aa31LG9G13680' => 'aar', 'Aa31LG9G14920' => 'aar', 'Aa31LG9G6650' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4977' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5467' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3254' => 'aag', 'Actinidia02578' => 'ach', 'Actinidia07693' => 'ach', 'Actinidia08413' => 'ach', 'Actinidia08414' => 'ach', 'Actinidia15289' => 'ach', 'Actinidia19871' => 'ach', 'Actinidia21475' => 'ach', 'Actinidia22576' => 'ach', 'Actinidia28327' => 'ach', 'Actinidia32491' => 'ach', 'Actinidia39463' => 'ach', 'Actinidia39571' => 'ach', 'Ah.01g013750' => 'amhyb', 'Ah.01g023210' => 'amhyb', 'Ah.04g164850' => 'amhyb', 'Ah.05g178060' => 'amhyb', 'Ah.07g204270' => 'amhyb', 'Ah.07g208480' => 'amhyb', 'Ah.09g237410' => 'amhyb', 'Ah.14g089460' => 'amhyb', 'AL1G41790' => 'aly', 'AL1G49050' => 'aly', 'AL1G53810' => 'aly', 'AL1G61400' => 'aly', 'AL4G18580' => 'aly', 'AL5G12510' => 'aly', 'AL5G12540' => 'aly', 'AL6G43230' => 'aly', 'AL7G10370' => 'aly', 'AL7G19250' => 'aly', 'AL8G12240' => 'aly', 'AL8G18540' => 'aly', 'Aqoxy1G02409' => 'aox', 'Aqoxy2G03993' => 'aox', 'Aqoxy3G03357' => 'aox', 'Aqoxy4G00785' => 'aox', 'Aqoxy5G02598' => 'aox', 'Aqoxy6G00132' => 'aox', 'Aqoxy7G01776' => 'aox', 'Aqoxy7G02316' => 'aox', 'Aqoxy7G03973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.12AFKW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B8730' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27IQR1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3F75VG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3RE0GA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41TCQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.527VTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FIR39' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5W8UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DA38EV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ63HS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H1I32C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HC27T5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4M8AP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7N3CZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9UVDZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LS1NQA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT1D4B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SKC4TM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCFV76' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF9Q1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQWD9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1ZM88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WE07RT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YCK7VH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJE6Q6' => 'arhy', 'AT1G28240' => 'ath', 'AT1G34550' => 'ath', 'AT1G53040' => 'ath', 'AT2G02910' => 'ath', 'AT4G09630' => 'ath', 'AT4G38500' => 'ath', 'AT5G42660' => 'ath', 'AT5G46220' => 'ath', 'ATR0152G026' => 'atr', 'ATR0564G343' => 'atr', 'ATR0706G151' => 'atr', 'ATR0733G207' => 'atr', 'ATR0751G234' => 'atr', 'ATR0807G048' => 'atr', 'ATR1091G084' => 'atr', 'Atru.chr10.1229' => 'acertr', 'Atru.chr10.1230' => 'acertr', 'Atru.chr10.1874' => 'acertr', 'Atru.chr11.1808' => 'acertr', 'Atru.chr13.1795' => 'acertr', 'Atru.chr13.570' => 'acertr', 'Atru.chr2.2608' => 'acertr', 'Atru.chr2.2609' => 'acertr', 'Atru.chr5.3428' => 'acertr', 'Atru.chr8.1171' => 'acertr', 'AUR62004651' => 'cqu', 'AUR62008675' => 'cqu', 'AUR62010014' => 'cqu', 'AUR62013004' => 'cqu', 'AUR62014825' => 'cqu', 'AUR62015015' => 'cqu', 'AUR62015151' => 'cqu', 'AUR62017020' => 'cqu', 'AUR62019422' => 'cqu', 'AUR62023570' => 'cqu', 'AUR62025571' => 'cqu', 'AUR62029098' => 'cqu', 'AUR62033863' => 'cqu', 'AUR62034296' => 'cqu', 'AUR62040075' => 'cqu', 'BcaB02g07334' => 'bca', 'BcaB02g10575' => 'bca', 'BcaB03g12119' => 'bca', 'BcaB03g12120' => 'bca', 'BcaB03g13945' => 'bca', 'BcaB04g17123' => 'bca', 'BcaB04g17867' => 'bca', 'BcaB04g19839' => 'bca', 'BcaB07g30317' => 'bca', 'BcaB07g32432' => 'bca', 'BcaB07g33362' => 'bca', 'BcaB08g36611' => 'bca', 'BcaC01g00028' => 'bca', 'BcaC01g01356' => 'bca', 'BcaC01g02034' => 'bca', 'BcaC01g06051' => 'bca', 'BcaC03g16839' => 'bca', 'BcaC03g17176' => 'bca', 'BcaC05g26829' => 'bca', 'BcaC06g31490' => 'bca', 'BcaC06g35344' => 'bca', 'BcaC06g36570' => 'bca', 'BcaC07g37537' => 'bca', 'BcaC08g43491' => 'bca', 'BcaC08g43773' => 'bca', 'BcaNung00234' => 'bca', 'BcaNung01982' => 'bca', 'BcaNung03707' => 'bca', 'BcaNung06454' => 'bca', 'BolC2t10762H' => 'bol', 'BolC2t11191H' => 'bol', 'BolC3t14322H' => 'bol', 'BolC3t19747H' => 'bol', 'BolC3t21425H' => 'bol', 'BolC4t27800H' => 'bol', 'BolC5t31423H' => 'bol', 'BolC6t35951H' => 'bol', 'BolC6t36282H' => 'bol', 'BolC7t40678H' => 'bol', 'BolC7t40679H' => 'bol', 'BolC7t42222H' => 'bol', 'BolC7t43492H' => 'bol', 'BolC7t46785H' => 'bol', 'BolC8t47853H' => 'bol', 'BolC9t56805H' => 'bol', 'BraA02t08000Z' => 'bra', 'BraA02t08341Z' => 'bra', 'BraA03t10936Z' => 'bra', 'BraA03t15657Z' => 'bra', 'BraA04t18100Z' => 'bra', 'BraA05t20523Z' => 'bra', 'BraA06t23353Z' => 'bra', 'BraA06t27473Z' => 'bra', 'BraA06t27769Z' => 'bra', 'BraA07t28928Z' => 'bra', 'BraA08t32236Z' => 'bra', 'BraA08t32841Z' => 'bra', 'BraA08t34524Z' => 'bra', 'BraA09t38742Z' => 'bra', 'BraA09t39295Z' => 'bra', 'C02p47180' => 'bna', 'C02p50990' => 'bna', 'C03p19360' => 'bna', 'C03p74950' => 'bna', 'C03p91000' => 'bna', 'C04p63260' => 'bna', 'C05p27050' => 'bna', 'C06p08750' => 'bna', 'C06p11490' => 'bna', 'C07p02820' => 'bna', 'C07p17180' => 'bna', 'C07p29440' => 'bna', 'C07p63730' => 'bna', 'C09p39260' => 'bna', 'CAN.G1164.34' => 'can', 'CAN.G1164.39' => 'can', 'CAN.G1530.3' => 'can', 'CAN.G162.61' => 'can', 'CAN.G176.6' => 'can', 'CAN.G289.49' => 'can', 'CAN.G370.21' => 'can', 'CAN.G370.22' => 'can', 'CAN.G371.117' => 'can', 'CAN.G58.37' => 'can', 'CAN.G588.98' => 'can', 'CANSAT21G2266' => 'cansat', 'CANSAT25G2799' => 'cansat', 'CANSAT35G0862' => 'cansat', 'CANSAT35G1704' => 'cansat', 'CANSAT35G1760' => 'cansat', 'CANSAT56G3971' => 'cansat', 'CANSAT56G4116' => 'cansat', 'CANSAT80G1259' => 'cansat', 'CARHR027730' => 'chi', 'CARHR033880' => 'chi', 'CARHR043270' => 'chi', 'CARHR145330' => 'chi', 'CARHR145340' => 'chi', 'CARHR175570' => 'chi', 'CARHR181570' => 'chi', 'CARHR258470' => 'chi', 'CARHR260490' => 'chi', 'CARHR294220' => 'chi', 'Carub.0001s2668' => 'cru', 'Carub.0001s3257' => 'cru', 'Carub.0001s4220' => 'cru', 'Carub.0005s0179' => 'cru', 'Carub.0006s2807' => 'cru', 'Carub.0007s0039' => 'cru', 'Carub.0008s0169' => 'cru', 'Carub.0008s0636' => 'cru', 'Ca_00338_v3' => 'car', 'Ca_00542_v3' => 'car', 'Ca_01844_v3' => 'car', 'Ca_10611_v3' => 'car', 'Ca_13326_v3' => 'car', 'Ca_17944_v3' => 'car', 'Ca_18546_v3' => 'car', 'Ca_24219_v3' => 'car', 'Ca_29972_v3' => 'car', 'CBR_g3681' => 'cbr', 'CBR_g40021' => 'cbr', 'Cc01_g08140' => 'ccan', 'Cc02_g13410' => 'ccan', 'Cc02_g37480' => 'ccan', 'Cc05_g12030' => 'ccan', 'Cc09_g03370' => 'ccan', 'Cc09_g10300' => 'ccan', 'Cc10_g03530' => 'ccan', 'Cc10_g11380' => 'ccan', 'CDE01G0176' => 'cde', 'CDE02G0675' => 'cde', 'CDE02G0942' => 'cde', 'CDE02G1153' => 'cde', 'CDE02G4177' => 'cde', 'CDE04G2117' => 'cde', 'CDE04G2736' => 'cde', 'CDE08G1161' => 'cde', 'CDE09G1238' => 'cde', 'Cfa000467' => 'cfa', 'Cfa000947' => 'cfa', 'Cfa004969' => 'cfa', 'Cfa005284' => 'cfa', 'Cfa008993' => 'cfa', 'Cfa018187' => 'cfa', 'Cfa018454' => 'cfa', 'Cfa020585' => 'cfa', 'Ciclev10000424m.g' => 'ccl', 'Ciclev10003605m.g' => 'ccl', 'Ciclev10007828m.g' => 'ccl', 'Ciclev10014620m.g' => 'ccl', 'Ciclev10015169m.g' => 'ccl', 'Ciclev10018291m.g' => 'ccl', 'Ciclev10028256m.g' => 'ccl', 'Ciclev10033822m.g' => 'ccl', 'CiPaw.05G060300' => 'cil', 'CiPaw.05G085000' => 'cil', 'CiPaw.06G083700' => 'cil', 'CiPaw.06G120300' => 'cil', 'CiPaw.09G060500' => 'cil', 'CiPaw.09G123800' => 'cil', 'CiPaw.11G169700' => 'cil', 'CiPaw.12G118300' => 'cil', 'CiPaw.15G071000' => 'cil', 'CiPaw.15G081900' => 'cil', 'ClCG01G024610' => 'cla', 'ClCG03G006070' => 'cla', 'ClCG05G019250' => 'cla', 'ClCG09G009500' => 'cla', 'ClCG11G008200' => 'cla', 'ClCG11G018080' => 'cla', 'COL.COLO4_17373' => 'col', 'COL.COLO4_22994' => 'col', 'COL.COLO4_26389' => 'col', 'COL.COLO4_27170' => 'col', 'COL.COLO4_31074' => 'col', 'COL.COLO4_31465' => 'col', 'COL.COLO4_36438' => 'col', 'COL.COLO4_36439' => 'col', 'Cpa.g.c38781' => 'cpa', 'Cpa.g.sc128.12' => 'cpa', 'Cpa.g.sc166.7' => 'cpa', 'Cpa.g.sc166.8' => 'cpa', 'Cpa.g.sc20.111' => 'cpa', 'Cpa.g.sc27.31' => 'cpa', 'Cpa.g.sc64.36' => 'cpa', 'Cpa.g.sc64.37' => 'cpa', 'Cpa.g.sc66.49' => 'cpa', 'Cpa.g.sc80.64' => 'cpa', 'CsaV3_1G012320' => 'csa', 'CsaV3_2G008480' => 'csa', 'CsaV3_2G033450' => 'csa', 'CsaV3_3G044830' => 'csa', 'CsaV3_4G033710' => 'csa', 'CsaV3_6G051730' => 'csa', 'CsaV3_7G025350' => 'csa', 'CSS0001067' => 'camsi', 'CSS0005996' => 'camsi', 'CSS0006590' => 'camsi', 'CSS0009673' => 'camsi', 'CSS0010201' => 'camsi', 'CSS0010549' => 'camsi', 'CSS0011364' => 'camsi', 'CSS0014473' => 'camsi', 'CSS0014961' => 'camsi', 'CSS0020191' => 'camsi', 'CSS0021165' => 'camsi', 'CSS0022306' => 'camsi', 'CSS0030591' => 'camsi', 'CSS0030696' => 'camsi', 'CSS0032653' => 'camsi', 'CSS0037487' => 'camsi', 'CSS0041102' => 'camsi', 'CSS0041261' => 'camsi', 'CSS0046246' => 'camsi', 'CSS0049256' => 'camsi', 'DCAR_004075' => 'dca', 'DCAR_011538' => 'dca', 'DCAR_019553' => 'dca', 'DCAR_020952' => 'dca', 'DCAR_021739' => 'dca', 'DCAR_027407' => 'dca', 'DCAR_027913' => 'dca', 'DCAR_028066' => 'dca', 'Dinv05899' => 'din', 'Dinv07563' => 'din', 'Dinv08010' => 'din', 'Dinv14125' => 'din', 'Dinv20172' => 'din', 'Dinv30743' => 'din', 'Dinv31229' => 'din', 'Dinv34162' => 'din', 'Dinv36028' => 'din', 'Dinv39368' => 'din', 'Dinv40565' => 'din', 'Dinv41706' => 'din', 'Duzib052G0089' => 'dzi', 'Duzib116G0641' => 'dzi', 'Duzib132G0069' => 'dzi', 'Duzib132G1219' => 'dzi', 'Duzib147G0278' => 'dzi', 'Duzib160G0480' => 'dzi', 'Duzib170G0661' => 'dzi', 'Duzib177G0591' => 'dzi', 'Duzib187G1353' => 'dzi', 'Duzib192G0858' => 'dzi', 'Duzib192G0883' => 'dzi', 'Duzib213G0506' => 'dzi', 'Duzib235G0289' => 'dzi', 'Duzib251G0422' => 'dzi', 'ECA232G3898' => 'eca', 'ECA233G5950' => 'eca', 'ECA234G1699' => 'eca', 'ECA234G2421' => 'eca', 'ECA236G0426' => 'eca', 'ECA236G4331' => 'eca', 'ECA248G2573' => 'eca', 'EL10Ac1g00077' => 'bvu', 'EL10Ac1g01746' => 'bvu', 'EL10Ac2g03464' => 'bvu', 'EL10Ac4g08176' => 'bvu', 'EL10Ac7g17521' => 'bvu', 'EL10Ac8g20386' => 'bvu', 'EL10Ac9g21343' => 'bvu', 'EL10Ac9g22688' => 'bvu', 'Eucgr.B03434' => 'egr', 'Eucgr.D00618' => 'egr', 'Eucgr.E02395' => 'egr', 'Eucgr.F01129' => 'egr', 'Eucgr.F02622' => 'egr', 'Eucgr.F04207' => 'egr', 'FAN01G0570' => 'fan', 'FAN03G3351' => 'fan', 'FAN06G3702' => 'fan', 'FAN07G2149' => 'fan', 'FAN10G3758' => 'fan', 'FAN11G1170' => 'fan', 'FAN11G2050' => 'fan', 'FAN11G2724' => 'fan', 'FAN12G1700' => 'fan', 'FAN12G2028' => 'fan', 'FAN15G1160' => 'fan', 'FAN15G3063' => 'fan', 'FAN16G2540' => 'fan', 'FAN16G3077' => 'fan', 'FAN16G3624' => 'fan', 'FAN17G0221' => 'fan', 'FAN20G2492' => 'fan', 'FAN20G2905' => 'fan', 'FAN21G0548' => 'fan', 'FAN21G1300' => 'fan', 'FAN22G0077' => 'fan', 'FAN22G1315' => 'fan', 'FAN24G1280' => 'fan', 'FAN24G1445' => 'fan', 'FAN24G3527' => 'fan', 'FAN25G0464' => 'fan', 'FAN25G2885' => 'fan', 'FAN25G3270' => 'fan', 'FAN27G1101' => 'fan', 'FAN27G2846' => 'fan', 'FAN27G3524' => 'fan', 'FvH4_2g11770' => 'fve', 'FvH4_2g15630' => 'fve', 'FvH4_3g05570' => 'fve', 'FvH4_3g09110' => 'fve', 'FvH4_3g19940' => 'fve', 'FvH4_4g04821' => 'fve', 'FvH4_4g31480' => 'fve', 'FvH4_7g01740' => 'fve', 'Glyma.05G130400' => 'gma', 'Glyma.05G156400' => 'gma', 'Glyma.07G197000' => 'gma', 'Glyma.08G085151' => 'gma', 'Glyma.08G114500' => 'gma', 'Glyma.08G300400' => 'gma', 'Glyma.10G215800' => 'gma', 'Glyma.12G224400' => 'gma', 'Glyma.13G179300' => 'gma', 'Glyma.13G218151' => 'gma', 'Glyma.13G238800' => 'gma', 'Glyma.13G276900' => 'gma', 'Glyma.14G078200' => 'gma', 'Glyma.15G074500' => 'gma', 'Glyma.15G094100' => 'gma', 'Glyma.17G247200' => 'gma', 'Glyma.18G120100' => 'gma', 'Glyma.20G176000' => 'gma', 'Gohir.A01G063600' => 'ghi', 'Gohir.A01G170301' => 'ghi', 'Gohir.A02G060500' => 'ghi', 'Gohir.A05G133850' => 'ghi', 'Gohir.A05G161400' => 'ghi', 'Gohir.A06G012900' => 'ghi', 'Gohir.A06G035901' => 'ghi', 'Gohir.A06G127100' => 'ghi', 'Gohir.A06G210500' => 'ghi', 'Gohir.A08G008650' => 'ghi', 'Gohir.A09G072700' => 'ghi', 'Gohir.A09G088301' => 'ghi', 'Gohir.A10G040600' => 'ghi', 'Gohir.A12G036300' => 'ghi', 'Gohir.A12G143350' => 'ghi', 'Gohir.A12G165500' => 'ghi', 'Gohir.A13G145700' => 'ghi', 'Gohir.D01G050000' => 'ghi', 'Gohir.D01G051366' => 'ghi', 'Gohir.D01G161350' => 'ghi', 'Gohir.D02G065900' => 'ghi', 'Gohir.D05G164200' => 'ghi', 'Gohir.D05G355500' => 'ghi', 'Gohir.D06G010400' => 'ghi', 'Gohir.D06G111250' => 'ghi', 'Gohir.D06G132000' => 'ghi', 'Gohir.D06G210500' => 'ghi', 'Gohir.D07G165675' => 'ghi', 'Gohir.D08G062240' => 'ghi', 'Gohir.D08G086101' => 'ghi', 'Gohir.D08G138060' => 'ghi', 'Gohir.D09G072300' => 'ghi', 'Gohir.D10G041400' => 'ghi', 'Gohir.D11G191020' => 'ghi', 'Gohir.D11G212066' => 'ghi', 'Gohir.D12G036300' => 'ghi', 'Gohir.D12G168600' => 'ghi', 'Gohir.D13G150600' => 'ghi', 'Gorai.001G057300' => 'gra', 'Gorai.002G069900' => 'gra', 'Gorai.002G200000' => 'gra', 'Gorai.003G067600' => 'gra', 'Gorai.005G074800' => 'gra', 'Gorai.006G087300' => 'gra', 'Gorai.008G037500' => 'gra', 'Gorai.008G181400' => 'gra', 'Gorai.009G169400' => 'gra', 'Gorai.009G387900' => 'gra', 'Gorai.010G013300' => 'gra', 'Gorai.010G153800' => 'gra', 'Gorai.010G255800' => 'gra', 'Gorai.011G043700' => 'gra', 'Gorai.011G198900' => 'gra', 'Gorai.013G168400' => 'gra', 'GSVIVG01005212001' => 'vvi', 'GSVIVG01006163001' => 'vvi', 'GSVIVG01009625001' => 'vvi', 'GSVIVG01014338001' => 'vvi', 'GSVIVG01020005001' => 'vvi', 'GSVIVG01021450001' => 'vvi', 'GSVIVG01023975001' => 'vvi', 'GSVIVG01034490001' => 'vvi', 'HanXRQChr04g0112071' => 'han', 'HanXRQChr05g0131151' => 'han', 'HanXRQChr09g0262371' => 'han', 'HanXRQChr09g0268401' => 'han', 'HanXRQChr10g0279241' => 'han', 'HanXRQChr10g0297961' => 'han', 'HanXRQChr11g0326231' => 'han', 'HanXRQChr11g0328471' => 'han', 'HanXRQChr16g0507941' => 'han', 'HanXRQChr17g0560211' => 'han', 'Haze_02108' => 'cav', 'Haze_02428' => 'cav', 'Haze_05593' => 'cav', 'Haze_06448' => 'cav', 'Haze_09427' => 'cav', 'Haze_12022' => 'cav', 'Haze_17612' => 'cav', 'Haze_17928' => 'cav', 'Hma1.2p1_0032F.1_g019250' => 'hma', 'Hma1.2p1_0163F.1_g072690' => 'hma', 'Hma1.2p1_0265F.1_g106710' => 'hma', 'Hma1.2p1_0286F.1_g113970' => 'hma', 'Hma1.2p1_0363F.1_g136640' => 'hma', 'Hma1.2p1_0584F.1_g183470' => 'hma', 'Hma1.2p1_0885F.1_g232570' => 'hma', 'HPP92_006022' => 'vpl', 'HPP92_007320' => 'vpl', 'HPP92_011521' => 'vpl', 'HPP92_019387' => 'vpl', 'HPP92_024038' => 'vpl', 'Hund05891' => 'sun', 'Hund06450' => 'sun', 'Hund12053' => 'sun', 'Hund16800' => 'sun', 'Hund21222' => 'sun', 'Hund22896' => 'sun', 'Hund23746' => 'sun', 'Hund27083' => 'sun', 'Lalb_Chr02g0141831' => 'lal', 'Lalb_Chr02g0141841' => 'lal', 'Lalb_Chr05g0220411' => 'lal', 'Lalb_Chr06g0162081' => 'lal', 'Lalb_Chr09g0327651' => 'lal', 'Lalb_Chr13g0295051' => 'lal', 'Lalb_Chr15g0086801' => 'lal', 'Lalb_Chr16g0383781' => 'lal', 'Lalb_Chr16g0383791' => 'lal', 'Lalb_Chr18g0055441' => 'lal', 'Lalb_Chr18g0059611' => 'lal', 'Lalb_Chr20g0109661' => 'lal', 'Lalb_Chr20g0109831' => 'lal', 'Lalb_Chr20g0121871' => 'lal', 'Lalb_Chr22g0355361' => 'lal', 'Lalb_Chr25g0286371' => 'lal', 'Lj1A1187G43' => 'lonja', 'Lj1A1205T50' => 'lonja', 'Lj1A800G33' => 'lonja', 'Lj1C1187T7' => 'lonja', 'Lj1C843T11' => 'lonja', 'Lj1g0010940' => 'lja', 'Lj2A288T69' => 'lonja', 'Lj3g0024276' => 'lja', 'Lj4A47T76' => 'lonja', 'Lj4g0005805' => 'lja', 'Lj4g0006097' => 'lja', 'Lj4g0008528' => 'lja', 'Lj4g0024907' => 'lja', 'Lj5g0012472' => 'lja', 'Lj5g0018648' => 'lja', 'Lj6C789G1' => 'lonja', 'Lj6g0004000' => 'lja', 'Lj7A292G67' => 'lonja', 'Lj7A292T64' => 'lonja', 'Lj9A400T58' => 'lonja', 'Lsat_1_v5_gn_1_126181' => 'lsa', 'Lsat_1_v5_gn_4_123041' => 'lsa', 'Lsat_1_v5_gn_4_133620' => 'lsa', 'Lsat_1_v5_gn_4_53221' => 'lsa', 'Lsat_1_v5_gn_4_71961' => 'lsa', 'Lsat_1_v5_gn_7_105241' => 'lsa', 'Lsat_1_v5_gn_7_21361' => 'lsa', 'Lsat_1_v5_gn_7_28860' => 'lsa', 'Lsat_1_v5_gn_7_31260' => 'lsa', 'Lsat_1_v5_gn_8_52801' => 'lsa', 'Manes.02G191400' => 'mes', 'Manes.03G110100' => 'mes', 'Manes.04G071100' => 'mes', 'Manes.05G100500' => 'mes', 'Manes.05G164700' => 'mes', 'Manes.15G087000' => 'mes', 'Manes.15G121500' => 'mes', 'Manes.16G028300' => 'mes', 'Manes.17G046100' => 'mes', 'Manes.17G069800' => 'mes', 'Manes.18G100500' => 'mes', 'Mapoly0002s0109' => 'mpo', 'Mapoly0024s0007' => 'mpo', 'Mapoly0089s0032' => 'mpo', 'MBI04_g42241_MAGBIO' => 'mbi', 'MBI05_g11988_MAGBIO' => 'mbi', 'MBI05_g35452_MAGBIO' => 'mbi', 'MBI07_g30179_MAGBIO' => 'mbi', 'MBI07_g35859_MAGBIO' => 'mbi', 'MBI07_g35860_MAGBIO' => 'mbi', 'MBI07_g37166_MAGBIO' => 'mbi', 'MBI08_g18172_MAGBIO' => 'mbi', 'MBI09_g08441_MAGBIO' => 'mbi', 'MBI13_g01676_MAGBIO' => 'mbi', 'MBI14_g42955_MAGBIO' => 'mbi', 'MBI16_g13161_MAGBIO' => 'mbi', 'MBI17_g27204_MAGBIO' => 'mbi', 'MBI19_g21595_MAGBIO' => 'mbi', 'MD00G1148400' => 'mdo', 'MD02G1301200' => 'mdo', 'MD03G1227800' => 'mdo', 'MD05G1041100' => 'mdo', 'MD05G1124800' => 'mdo', 'MD05G1284000' => 'mdo', 'MD05G1338800' => 'mdo', 'MD05G1338900' => 'mdo', 'MD07G1022800' => 'mdo', 'MD10G1047500' => 'mdo', 'MD10G1127500' => 'mdo', 'MD10G1262300' => 'mdo', 'MD10G1293800' => 'mdo', 'MD16G1074300' => 'mdo', 'Medtr1g021670' => 'mtr', 'Medtr1g096320' => 'mtr', 'Medtr2g013690' => 'mtr', 'Medtr2g019450' => 'mtr', 'Medtr2g085170' => 'mtr', 'Medtr4g088785' => 'mtr', 'Medtr8g055930' => 'mtr', 'Medtr8g085850' => 'mtr', 'MELO3C002605.2' => 'cme', 'MELO3C003891.2' => 'cme', 'MELO3C004012.2' => 'cme', 'MELO3C007134.2' => 'cme', 'MELO3C008118.2' => 'cme', 'MELO3C016700.2' => 'cme', 'MELO3C024127.2' => 'cme', 'MELO3C033361.2' => 'cme', 'MELO3C033362.2' => 'cme', 'Migut.C00430' => 'egut', 'Migut.C01246' => 'egut', 'Migut.E00101' => 'egut', 'Migut.H01486' => 'egut', 'Migut.H01939' => 'egut', 'Migut.K00360' => 'egut', 'Migut.M00910' => 'egut', 'Migut.M01139' => 'egut', 'Migut.N02677' => 'egut', 'MSTRG.13252' => 'ama', 'MSTRG.14701' => 'ama', 'MSTRG.1521' => 'ama', 'MSTRG.15884' => 'ama', 'MSTRG.16242' => 'ama', 'MSTRG.22285' => 'ama', 'MSTRG.22444' => 'ama', 'MSTRG.2349' => 'ama', 'MSTRG.26308' => 'ama', 'MSTRG.28296' => 'ama', 'MSTRG.9895' => 'ama', 'Nitab4.5_0000110g0060' => 'nta', 'Nitab4.5_0000420g0130' => 'nta', 'Nitab4.5_0000422g0030' => 'nta', 'Nitab4.5_0000560g0180' => 'nta', 'Nitab4.5_0000703g0100' => 'nta', 'Nitab4.5_0000786g0200' => 'nta', 'Nitab4.5_0001336g0020' => 'nta', 'Nitab4.5_0001796g0030' => 'nta', 'Nitab4.5_0003348g0060' => 'nta', 'Nitab4.5_0003698g0040' => 'nta', 'Nitab4.5_0003942g0090' => 'nta', 'Nitab4.5_0004775g0070' => 'nta', 'Nitab4.5_0004864g0030' => 'nta', 'Nitab4.5_0005615g0020' => 'nta', 'Nitab4.5_0009288g0030' => 'nta', 'Nitab4.5_0009341g0010' => 'nta', 'Nitab4.5_0009535g0010' => 'nta', 'Nn1g03995' => 'nnu', 'Nn1g04100' => 'nnu', 'Nn1g06530' => 'nnu', 'Nn3g16404' => 'nnu', 'Nn3g17212' => 'nnu', 'Nn3g20776' => 'nnu', 'Nn3g21923' => 'nnu', 'Nn5g27737' => 'nnu', 'Nn5g29461' => 'nnu', 'Nn7g38355' => 'nnu', 'Nn8g39873' => 'nnu', 'Oeu000548.2' => 'oeu', 'Oeu004672.1' => 'oeu', 'Oeu015605.2' => 'oeu', 'Oeu016092.1' => 'oeu', 'Oeu017879.3' => 'oeu', 'Oeu024910.1' => 'oeu', 'Oeu028965.1' => 'oeu', 'Oeu031269.1' => 'oeu', 'Oeu031270.1' => 'oeu', 'Oeu032535.1' => 'oeu', 'Oeu034151.1' => 'oeu', 'Oeu034152.1' => 'oeu', 'Oeu034588.2' => 'oeu', 'Oeu050846.1' => 'oeu', 'Oeu050849.2' => 'oeu', 'Oeu051063.2' => 'oeu', 'Oeu052368.1' => 'oeu', 'Oeu052370.1' => 'oeu', 'Os01g0210400' => 'osa', 'Os01g0304300' => 'osa', 'Os01g0749100' => 'osa', 'Os02g0745800' => 'osa', 'Os03g0769050' => 'osa', 'Os05g0531500' => 'osa', 'Os06g0724300' => 'osa', 'Os11g0198100' => 'osa', 'Peaxi162Scf00069g01425' => 'pax', 'Peaxi162Scf00280g00811' => 'pax', 'Peaxi162Scf00310g00615' => 'pax', 'Peaxi162Scf00362g00542' => 'pax', 'Peaxi162Scf00461g00310' => 'pax', 'Peaxi162Scf00530g00118' => 'pax', 'Peaxi162Scf00541g00057' => 'pax', 'Peaxi162Scf00661g00017' => 'pax', 'Peaxi162Scf00926g00027' => 'pax', 'Peaxi162Scf01064g00263' => 'pax', 'Peaxi162Scf01211g00135' => 'pax', 'PGR004G2336' => 'pgr', 'PGR042G0327' => 'pgr', 'PGR042G1957' => 'pgr', 'PGR042G2003' => 'pgr', 'PGR042G3929' => 'pgr', 'PGR083G1137' => 'pgr', 'PGR083G1364' => 'pgr', 'PGSC0003DMG400003381' => 'stu', 'PGSC0003DMG400003417' => 'stu', 'PGSC0003DMG400008981' => 'stu', 'PGSC0003DMG400012417' => 'stu', 'PGSC0003DMG400012823' => 'stu', 'PGSC0003DMG400016885' => 'stu', 'PGSC0003DMG400022812' => 'stu', 'PGSC0003DMG400029726' => 'stu', 'PGSC0003DMG401009243' => 'stu', 'PGSC0003DMG401031505' => 'stu', 'PGSC0003DMG402031505' => 'stu', 'Phvul.001G017600' => 'pvu', 'Phvul.002G193500' => 'pvu', 'Phvul.002G228900' => 'pvu', 'Phvul.002G236800' => 'pvu', 'Phvul.003G049500' => 'pvu', 'Phvul.005G072000' => 'pvu', 'Phvul.006G164800' => 'pvu', 'Phvul.006G185100' => 'pvu', 'Phvul.007G090000' => 'pvu', 'Potri.001G399800' => 'ptr', 'Potri.002G149900' => 'ptr', 'Potri.004G044100' => 'ptr', 'Potri.004G177600' => 'ptr', 'Potri.009G138000' => 'ptr', 'Potri.010G094000' => 'ptr', 'Potri.011G053000' => 'ptr', 'Potri.011G119300' => 'ptr', 'Potri.013G113700' => 'ptr', 'Potri.018G107800' => 'ptr', 'Potri.019G084100' => 'ptr', 'Pp3c14_23720' => 'ppa', 'Pp3c16_6340' => 'ppa', 'Pp3c23_13420' => 'ppa', 'Pp3c24_2740' => 'ppa', 'Pp3c25_860' => 'ppa', 'Pp3c8_21750' => 'ppa', 'Prupe.1G273000' => 'ppe', 'Prupe.1G273700' => 'ppe', 'Prupe.1G274100' => 'ppe', 'Prupe.2G023300' => 'ppe', 'Prupe.4G048000' => 'ppe', 'Prupe.4G080400' => 'ppe', 'Prupe.4G181200' => 'ppe', 'Prupe.8G056900' => 'ppe', 'Prupe.8G168700' => 'ppe', 'Psat1g189080' => 'psa', 'Psat1g204760' => 'psa', 'Psat4g175560' => 'psa', 'Psat4g177720' => 'psa', 'Psat5g244240' => 'psa', 'Psat6g010720' => 'psa', 'Psat6g187200' => 'psa', 'Psat7g072040' => 'psa', 'PSO017G3501' => 'pso', 'PSO063G2148' => 'pso', 'PSO063G5608' => 'pso', 'PSO210G6392' => 'pso', 'PSO541G2319' => 'pso', 'PSO541G2836' => 'pso', 'PSO541G4012' => 'pso', 'PSO541G6253' => 'pso', 'PSO675G0580' => 'pso', 'PSO675G0856' => 'pso', 'PSO675G5635' => 'pso', 'PSO675G9157' => 'pso', 'PSO832G1660' => 'pso', 'PSO832G1969' => 'pso', 'QL02p007186' => 'qlo', 'QL02p033904' => 'qlo', 'QL03p064391' => 'qlo', 'QL05p040593' => 'qlo', 'QL05p058242' => 'qlo', 'QL08p021825' => 'qlo', 'QL11p004981' => 'qlo', 'RcHm_v2.0_Chr1g0318301' => 'rch', 'RcHm_v2.0_Chr4g0418501' => 'rch', 'RcHm_v2.0_Chr4g0439971' => 'rch', 'RcHm_v2.0_Chr5g0008541' => 'rch', 'RcHm_v2.0_Chr5g0014101' => 'rch', 'RcHm_v2.0_Chr5g0014131' => 'rch', 'RcHm_v2.0_Chr5g0033621' => 'rch', 'RcHm_v2.0_Chr6g0272041' => 'rch', 'RcHm_v2.0_Chr6g0278831' => 'rch', 'Rhsim02G0130400' => 'rsi', 'Rhsim02G0171100' => 'rsi', 'Rhsim05G0053000' => 'rsi', 'Rhsim05G0053100' => 'rsi', 'Rhsim06G0096500' => 'rsi', 'Rhsim06G0096600' => 'rsi', 'Rhsim06G0199100' => 'rsi', 'Rhsim12G0062300' => 'rsi', 'Rhsim12G0062800' => 'rsi', 'Sabra02G0118600' => 'sbr', 'Sabra04G0027300' => 'sbr', 'Sabra04G0119500' => 'sbr', 'Sabra08G0112500' => 'sbr', 'Sabra11G0036800' => 'sbr', 'Sabra11G0103800' => 'sbr', 'Sabra13G0096300' => 'sbr', 'Sabra16G0262300' => 'sbr', 'Sabra18G0091700' => 'sbr', 'Sabra19G0095400' => 'sbr', 'SalBow6G3080' => 'sbo', 'SalBow7G1157' => 'sbo', 'SalBow7G2123' => 'sbo', 'SalBow7G2285' => 'sbo', 'SalBow7G3537' => 'sbo', 'SalBow8G2947' => 'sbo', 'SalBow8G4463' => 'sbo', 'SalBow8G5466' => 'sbo', 'Sc01g0001750' => 'sci', 'Sc02g0006640' => 'sci', 'Sc02g0006670' => 'sci', 'Sc04g0008220' => 'sci', 'Sc05g0006190' => 'sci', 'Sc08g0002760' => 'sci', 'Sc17g0006170' => 'sci', 'Sc22g0002050' => 'sci', 'Sc23g0001190' => 'sci', 'Sc24g0000980' => 'sci', 'Sed0006245' => 'sed', 'Sed0007543' => 'sed', 'Sed0009411' => 'sed', 'Sed0010765' => 'sed', 'Sed0012944' => 'sed', 'Sed0014682' => 'sed', 'Sed0016174' => 'sed', 'Sed0016796' => 'sed', 'Sed0020317' => 'sed', 'Sed0021467' => 'sed', 'SEGI_01316' => 'sgi', 'SEGI_03374' => 'sgi', 'SEGI_16265' => 'sgi', 'SEGI_18569' => 'sgi', 'SEGI_20351' => 'sgi', 'SEGI_26395' => 'sgi', 'SEGI_29469' => 'sgi', 'SEGI_34771' => 'sgi', 'SEGI_36769' => 'sgi', 'SEGI_37139' => 'sgi', 'SGA_v2.0_scaffold100G29687' => 'sas', 'SGA_v2.0_scaffold118G32472' => 'sas', 'SGA_v2.0_scaffold14G07051' => 'sas', 'SGA_v2.0_scaffold183G39845' => 'sas', 'SGA_v2.0_scaffold1G00174' => 'sas', 'SGA_v2.0_scaffold22G09714' => 'sas', 'SGA_v2.0_scaffold333G48992' => 'sas', 'SGA_v2.0_scaffold46G17491' => 'sas', 'SGA_v2.0_scaffold49G18294' => 'sas', 'SGA_v2.0_scaffold63G21658' => 'sas', 'SHI01741' => 'shi', 'SHI05771' => 'shi', 'SHI18077' => 'shi', 'SHI20525' => 'shi', 'SHI20527' => 'shi', 'SHI20528' => 'shi', 'SMO172G0185' => 'smo', 'SMO198G0020' => 'smo', 'SMO351G0006' => 'smo', 'SMO356G0118' => 'smo', 'SMO358G0296' => 'smo', 'SMO367G0079' => 'smo', 'SMO367G1277' => 'smo', 'Solyc01g014220.3' => 'sly', 'Solyc01g111770.2' => 'sly', 'Solyc02g078180.3' => 'sly', 'Solyc03g006430.3' => 'sly', 'Solyc03g006456.1' => 'sly', 'Solyc03g079860.2' => 'sly', 'Solyc04g079770.3' => 'sly', 'Solyc05g007430.4' => 'sly', 'Solyc07g063150.3' => 'sly', 'Solyc08g016620.3' => 'sly', 'Solyc09g057590.3' => 'sly', 'Solyc09g057600.1' => 'sly', 'Solyc10g009050.3' => 'sly', 'Solyc11g017420.2' => 'sly', 'Sopen01g053810' => 'spe', 'Sopen02g023040' => 'spe', 'Sopen03g002440' => 'spe', 'Sopen04g033350' => 'spe', 'Sopen05g003310' => 'spe', 'Sopen07g004050' => 'spe', 'Sopen07g031340' => 'spe', 'Sopen08g006990' => 'spe', 'Sopen10g004830' => 'spe', 'Sopen11g009370' => 'spe', 'Sp1g24450' => 'spa', 'Sp1g29670' => 'spa', 'Sp1g39600' => 'spa', 'Sp2g11080' => 'spa', 'Sp2g13970' => 'spa', 'Sp4g16130' => 'spa', 'Sp6g13080' => 'spa', 'Sp7g37270' => 'spa', 'TAR371G0065' => 'tar', 'TAR376G0340' => 'tar', 'TAR376G0435' => 'tar', 'TAR381G0002' => 'tar', 'TAR381G1236' => 'tar', 'TAR624G0055' => 'tar', 'TAR624G0324' => 'tar', 'TAR624G0696' => 'tar', 'TAR624G0906' => 'tar', 'TAR625G0107' => 'tar', 'TAR626G0015' => 'tar', 'TAR626G1356' => 'tar', 'TAR627G0888' => 'tar', 'TAR628G0399' => 'tar', 'TAR628G1327' => 'tar', 'TAR629G2831' => 'tar', 'TAR629G2874' => 'tar', 'TAR633G1432' => 'tar', 'TAR633G2771' => 'tar', 'THA.LOC104803394' => 'tha', 'THA.LOC104805153' => 'tha', 'THA.LOC104806784' => 'tha', 'THA.LOC104810473' => 'tha', 'THA.LOC104813100' => 'tha', 'THA.LOC104814215' => 'tha', 'THA.LOC104815554' => 'tha', 'THA.LOC104820544' => 'tha', 'THA.LOC104824754' => 'tha', 'THA.LOC104827717' => 'tha', 'Thecc.02G031400' => 'tca', 'Thecc.02G055900' => 'tca', 'Thecc.02G350800' => 'tca', 'Thecc.06G150900' => 'tca', 'Thecc.06G186600' => 'tca', 'Thecc.07G089600' => 'tca', 'Thecc.08G020400' => 'tca', 'Thecc.08G182100' => 'tca', 'Thhalv10000873m.g' => 'esa', 'Thhalv10004185m.g' => 'esa', 'Thhalv10006981m.g' => 'esa', 'Thhalv10007204m.g' => 'esa', 'Thhalv10011374m.g' => 'esa', 'Thhalv10013482m.g' => 'esa', 'Thhalv10017801m.g' => 'esa', 'Thhalv10024983m.g' => 'esa', 'TPR.G12072' => 'tpr', 'TPR.G15769' => 'tpr', 'TPR.G16504' => 'tpr', 'TPR.G16506' => 'tpr', 'TPR.G24345' => 'tpr', 'TPR.G26666' => 'tpr', 'TPR.G27320' => 'tpr', 'TPR.G31819' => 'tpr', 'TPR.G38879' => 'tpr', 'TPR.G39015' => 'tpr', 'TPR.G8819' => 'tpr', 'TWI09G0924' => 'twi', 'TWI12G0811' => 'twi', 'TWI12G1294' => 'twi', 'TWI31G0150' => 'twi', 'TWI36G1262' => 'twi', 'TWI38G1287' => 'twi', 'TWI38G1633' => 'twi', 'TWI38G1982' => 'twi', 'TWI39G0116' => 'twi', 'TWI60G1011' => 'twi', 'TWI63G0171' => 'twi', 'TWI73G0839' => 'twi', 'TWI79G1511' => 'twi', 'unitig_0.g915' => 'ugi', 'unitig_0.g916' => 'ugi', 'unitig_21.g20219' => 'ugi', 'unitig_21.g20416' => 'ugi', 'unitig_578.g16132' => 'ugi', 'unitig_578.g16718' => 'ugi', 'unitig_62.g23481' => 'ugi', 'unitig_744.g24535' => 'ugi', 'unitig_749.g13525' => 'ugi', 'vmacro01248' => 'vma', 'vmacro02290' => 'vma', 'vmacro10946' => 'vma', 'vmacro11865' => 'vma', 'vmacro12493' => 'vma', 'vmacro17322' => 'vma', 'vmacro21599' => 'vma', 'vmacro23041' => 'vma', 'VMungo0251G0004' => 'vmu', 'VMungo0251G2639' => 'vmu', 'VMungo0251G2967' => 'vmu', 'VMungo0540G0864' => 'vmu', 'VMungo0540G1569' => 'vmu', 'VMungo0647G0317' => 'vmu', 'VMungo0720G1373' => 'vmu', 'VMungo0720G1508' => 'vmu', 'VMungo1080G0485' => 'vmu', 'VMungo1215G3177' => 'vmu', 'Zm00001eb112600' => 'zma', 'Zm00001eb120220' => 'zma', 'Zm00001eb153240' => 'zma', 'Zm00001eb168880' => 'zma', 'Zm00001eb213920' => 'zma', 'Zm00001eb228280' => 'zma', 'Zm00001eb254580' => 'zma', 'Zm00001eb272180' => 'zma', 'Zm00001eb293190' => 'zma', 'Zm00001eb322930' => 'zma', 'Zm00001eb353360' => 'zma', 'Zm00001eb353390' => 'zma', 'Zm00001eb353430' => 'zma', 'Zm00001eb353440' => 'zma', 'Zm00001eb353780' => 'zma' ), 'gf_id' => 'HOM05D000499', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000499' ), 'data_identifier' => 'HOM05D000499', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000499', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1066', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p29780' => 'bna', 'A02p33180' => 'bna', 'A03p16470' => 'bna', 'A03p66010' => 'bna', 'A04p25970' => 'bna', 'A06p01270' => 'bna', 'A06p46080' => 'bna', 'A07p11400' => 'bna', 'A08p01840' => 'bna', 'A08p08230' => 'bna', 'A08p25740' => 'bna', 'A09p32070' => 'bna', 'A09p37830' => 'bna', 'A09p42840' => 'bna', 'A09p42850' => 'bna', 'Aa31LG10G2060' => 'aar', 'Aa31LG2G7410' => 'aar', 'Aa31LG6G10200' => 'aar', 'Aa31LG6G16680' => 'aar', 'Aa31LG6G8470' => 'aar', 'Aa31LG9G12730' => 'aar', 'Aa31LG9G13680' => 'aar', 'Aa31LG9G14920' => 'aar', 'Aa31LG9G6650' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4977' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5467' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3254' => 'aag', 'Actinidia02578' => 'ach', 'Actinidia07693' => 'ach', 'Actinidia08413' => 'ach', 'Actinidia08414' => 'ach', 'Actinidia15289' => 'ach', 'Actinidia19871' => 'ach', 'Actinidia21475' => 'ach', 'Actinidia22576' => 'ach', 'Actinidia28327' => 'ach', 'Actinidia32491' => 'ach', 'Actinidia39463' => 'ach', 'Actinidia39571' => 'ach', 'Ah.01g013750' => 'amhyb', 'Ah.01g023210' => 'amhyb', 'Ah.04g164850' => 'amhyb', 'Ah.05g178060' => 'amhyb', 'Ah.07g204270' => 'amhyb', 'Ah.07g208480' => 'amhyb', 'Ah.09g237410' => 'amhyb', 'Ah.14g089460' => 'amhyb', 'AL1G41790' => 'aly', 'AL1G49050' => 'aly', 'AL1G53810' => 'aly', 'AL1G61400' => 'aly', 'AL4G18580' => 'aly', 'AL5G12510' => 'aly', 'AL5G12540' => 'aly', 'AL6G43230' => 'aly', 'AL7G10370' => 'aly', 'AL7G19250' => 'aly', 'AL8G12240' => 'aly', 'AL8G18540' => 'aly', 'Aqoxy1G02409' => 'aox', 'Aqoxy2G03993' => 'aox', 'Aqoxy3G03357' => 'aox', 'Aqoxy4G00785' => 'aox', 'Aqoxy5G02598' => 'aox', 'Aqoxy6G00132' => 'aox', 'Aqoxy7G01776' => 'aox', 'Aqoxy7G02316' => 'aox', 'Aqoxy7G03973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.12AFKW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B8730' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27IQR1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3F75VG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3RE0GA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41TCQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.527VTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FIR39' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5W8UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DA38EV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ63HS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H1I32C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HC27T5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4M8AP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7N3CZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9UVDZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LS1NQA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT1D4B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SKC4TM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCFV76' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF9Q1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQWD9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1ZM88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WE07RT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YCK7VH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJE6Q6' => 'arhy', 'AT1G28240' => 'ath', 'AT1G34550' => 'ath', 'AT1G53040' => 'ath', 'AT2G02910' => 'ath', 'AT4G09630' => 'ath', 'AT4G38500' => 'ath', 'AT5G42660' => 'ath', 'AT5G46220' => 'ath', 'ATR0152G026' => 'atr', 'ATR0564G343' => 'atr', 'ATR0706G151' => 'atr', 'ATR0733G207' => 'atr', 'ATR0751G234' => 'atr', 'ATR0807G048' => 'atr', 'ATR1091G084' => 'atr', 'Atru.chr10.1229' => 'acertr', 'Atru.chr10.1230' => 'acertr', 'Atru.chr10.1874' => 'acertr', 'Atru.chr11.1808' => 'acertr', 'Atru.chr13.1795' => 'acertr', 'Atru.chr13.570' => 'acertr', 'Atru.chr2.2608' => 'acertr', 'Atru.chr2.2609' => 'acertr', 'Atru.chr5.3428' => 'acertr', 'Atru.chr8.1171' => 'acertr', 'AUR62004651' => 'cqu', 'AUR62008675' => 'cqu', 'AUR62010014' => 'cqu', 'AUR62013004' => 'cqu', 'AUR62014825' => 'cqu', 'AUR62015015' => 'cqu', 'AUR62015151' => 'cqu', 'AUR62017020' => 'cqu', 'AUR62019422' => 'cqu', 'AUR62023570' => 'cqu', 'AUR62025571' => 'cqu', 'AUR62029098' => 'cqu', 'AUR62033863' => 'cqu', 'AUR62034296' => 'cqu', 'AUR62040075' => 'cqu', 'BcaB02g07334' => 'bca', 'BcaB02g10575' => 'bca', 'BcaB03g12119' => 'bca', 'BcaB03g12120' => 'bca', 'BcaB03g13945' => 'bca', 'BcaB04g17123' => 'bca', 'BcaB04g17867' => 'bca', 'BcaB04g19839' => 'bca', 'BcaB07g30317' => 'bca', 'BcaB07g32432' => 'bca', 'BcaB07g33362' => 'bca', 'BcaB08g36611' => 'bca', 'BcaC01g00028' => 'bca', 'BcaC01g01356' => 'bca', 'BcaC01g02034' => 'bca', 'BcaC01g06051' => 'bca', 'BcaC03g16839' => 'bca', 'BcaC03g17176' => 'bca', 'BcaC05g26829' => 'bca', 'BcaC06g31490' => 'bca', 'BcaC06g35344' => 'bca', 'BcaC06g36570' => 'bca', 'BcaC07g37537' => 'bca', 'BcaC08g43491' => 'bca', 'BcaC08g43773' => 'bca', 'BcaNung00234' => 'bca', 'BcaNung01982' => 'bca', 'BcaNung03707' => 'bca', 'BcaNung06454' => 'bca', 'BolC2t10762H' => 'bol', 'BolC2t11191H' => 'bol', 'BolC3t14322H' => 'bol', 'BolC3t19747H' => 'bol', 'BolC3t21425H' => 'bol', 'BolC4t27800H' => 'bol', 'BolC5t31423H' => 'bol', 'BolC6t35951H' => 'bol', 'BolC6t36282H' => 'bol', 'BolC7t40678H' => 'bol', 'BolC7t40679H' => 'bol', 'BolC7t42222H' => 'bol', 'BolC7t43492H' => 'bol', 'BolC7t46785H' => 'bol', 'BolC8t47853H' => 'bol', 'BolC9t56805H' => 'bol', 'BraA02t08000Z' => 'bra', 'BraA02t08341Z' => 'bra', 'BraA03t10936Z' => 'bra', 'BraA03t15657Z' => 'bra', 'BraA04t18100Z' => 'bra', 'BraA05t20523Z' => 'bra', 'BraA06t23353Z' => 'bra', 'BraA06t27473Z' => 'bra', 'BraA06t27769Z' => 'bra', 'BraA07t28928Z' => 'bra', 'BraA08t32236Z' => 'bra', 'BraA08t32841Z' => 'bra', 'BraA08t34524Z' => 'bra', 'BraA09t38742Z' => 'bra', 'BraA09t39295Z' => 'bra', 'C02p47180' => 'bna', 'C02p50990' => 'bna', 'C03p19360' => 'bna', 'C03p74950' => 'bna', 'C03p91000' => 'bna', 'C04p63260' => 'bna', 'C05p27050' => 'bna', 'C06p08750' => 'bna', 'C06p11490' => 'bna', 'C07p02820' => 'bna', 'C07p17180' => 'bna', 'C07p29440' => 'bna', 'C07p63730' => 'bna', 'C09p39260' => 'bna', 'CAN.G1164.34' => 'can', 'CAN.G1164.39' => 'can', 'CAN.G1530.3' => 'can', 'CAN.G162.61' => 'can', 'CAN.G176.6' => 'can', 'CAN.G289.49' => 'can', 'CAN.G370.21' => 'can', 'CAN.G370.22' => 'can', 'CAN.G371.117' => 'can', 'CAN.G58.37' => 'can', 'CAN.G588.98' => 'can', 'CANSAT21G2266' => 'cansat', 'CANSAT25G2799' => 'cansat', 'CANSAT35G0862' => 'cansat', 'CANSAT35G1704' => 'cansat', 'CANSAT35G1760' => 'cansat', 'CANSAT56G3971' => 'cansat', 'CANSAT56G4116' => 'cansat', 'CANSAT80G1259' => 'cansat', 'CARHR027730' => 'chi', 'CARHR033880' => 'chi', 'CARHR043270' => 'chi', 'CARHR145330' => 'chi', 'CARHR145340' => 'chi', 'CARHR175570' => 'chi', 'CARHR181570' => 'chi', 'CARHR258470' => 'chi', 'CARHR260490' => 'chi', 'CARHR294220' => 'chi', 'Carub.0001s2668' => 'cru', 'Carub.0001s3257' => 'cru', 'Carub.0001s4220' => 'cru', 'Carub.0005s0179' => 'cru', 'Carub.0006s2807' => 'cru', 'Carub.0007s0039' => 'cru', 'Carub.0008s0169' => 'cru', 'Carub.0008s0636' => 'cru', 'Ca_00338_v3' => 'car', 'Ca_00542_v3' => 'car', 'Ca_01844_v3' => 'car', 'Ca_10611_v3' => 'car', 'Ca_13326_v3' => 'car', 'Ca_17944_v3' => 'car', 'Ca_18546_v3' => 'car', 'Ca_24219_v3' => 'car', 'Ca_29972_v3' => 'car', 'CBR_g3681' => 'cbr', 'CBR_g40021' => 'cbr', 'Cc01_g08140' => 'ccan', 'Cc02_g13410' => 'ccan', 'Cc02_g37480' => 'ccan', 'Cc05_g12030' => 'ccan', 'Cc09_g03370' => 'ccan', 'Cc09_g10300' => 'ccan', 'Cc10_g03530' => 'ccan', 'Cc10_g11380' => 'ccan', 'CDE01G0176' => 'cde', 'CDE02G0675' => 'cde', 'CDE02G0942' => 'cde', 'CDE02G1153' => 'cde', 'CDE02G4177' => 'cde', 'CDE04G2117' => 'cde', 'CDE04G2736' => 'cde', 'CDE08G1161' => 'cde', 'CDE09G1238' => 'cde', 'Cfa000467' => 'cfa', 'Cfa000947' => 'cfa', 'Cfa004969' => 'cfa', 'Cfa005284' => 'cfa', 'Cfa008993' => 'cfa', 'Cfa018187' => 'cfa', 'Cfa018454' => 'cfa', 'Cfa020585' => 'cfa', 'Ciclev10000424m.g' => 'ccl', 'Ciclev10003605m.g' => 'ccl', 'Ciclev10007828m.g' => 'ccl', 'Ciclev10014620m.g' => 'ccl', 'Ciclev10015169m.g' => 'ccl', 'Ciclev10018291m.g' => 'ccl', 'Ciclev10028256m.g' => 'ccl', 'Ciclev10033822m.g' => 'ccl', 'CiPaw.05G060300' => 'cil', 'CiPaw.05G085000' => 'cil', 'CiPaw.06G083700' => 'cil', 'CiPaw.06G120300' => 'cil', 'CiPaw.09G060500' => 'cil', 'CiPaw.09G123800' => 'cil', 'CiPaw.11G169700' => 'cil', 'CiPaw.12G118300' => 'cil', 'CiPaw.15G071000' => 'cil', 'CiPaw.15G081900' => 'cil', 'ClCG01G024610' => 'cla', 'ClCG03G006070' => 'cla', 'ClCG05G019250' => 'cla', 'ClCG09G009500' => 'cla', 'ClCG11G008200' => 'cla', 'ClCG11G018080' => 'cla', 'COL.COLO4_17373' => 'col', 'COL.COLO4_22994' => 'col', 'COL.COLO4_26389' => 'col', 'COL.COLO4_27170' => 'col', 'COL.COLO4_31074' => 'col', 'COL.COLO4_31465' => 'col', 'COL.COLO4_36438' => 'col', 'COL.COLO4_36439' => 'col', 'Cpa.g.c38781' => 'cpa', 'Cpa.g.sc128.12' => 'cpa', 'Cpa.g.sc166.7' => 'cpa', 'Cpa.g.sc166.8' => 'cpa', 'Cpa.g.sc20.111' => 'cpa', 'Cpa.g.sc27.31' => 'cpa', 'Cpa.g.sc64.36' => 'cpa', 'Cpa.g.sc64.37' => 'cpa', 'Cpa.g.sc66.49' => 'cpa', 'Cpa.g.sc80.64' => 'cpa', 'CsaV3_1G012320' => 'csa', 'CsaV3_2G008480' => 'csa', 'CsaV3_2G033450' => 'csa', 'CsaV3_3G044830' => 'csa', 'CsaV3_4G033710' => 'csa', 'CsaV3_6G051730' => 'csa', 'CsaV3_7G025350' => 'csa', 'CSS0001067' => 'camsi', 'CSS0005996' => 'camsi', 'CSS0006590' => 'camsi', 'CSS0009673' => 'camsi', 'CSS0010201' => 'camsi', 'CSS0010549' => 'camsi', 'CSS0011364' => 'camsi', 'CSS0014473' => 'camsi', 'CSS0014961' => 'camsi', 'CSS0020191' => 'camsi', 'CSS0021165' => 'camsi', 'CSS0022306' => 'camsi', 'CSS0030591' => 'camsi', 'CSS0030696' => 'camsi', 'CSS0032653' => 'camsi', 'CSS0037487' => 'camsi', 'CSS0041102' => 'camsi', 'CSS0041261' => 'camsi', 'CSS0046246' => 'camsi', 'CSS0049256' => 'camsi', 'DCAR_004075' => 'dca', 'DCAR_011538' => 'dca', 'DCAR_019553' => 'dca', 'DCAR_020952' => 'dca', 'DCAR_021739' => 'dca', 'DCAR_027407' => 'dca', 'DCAR_027913' => 'dca', 'DCAR_028066' => 'dca', 'Dinv05899' => 'din', 'Dinv07563' => 'din', 'Dinv08010' => 'din', 'Dinv14125' => 'din', 'Dinv20172' => 'din', 'Dinv30743' => 'din', 'Dinv31229' => 'din', 'Dinv34162' => 'din', 'Dinv36028' => 'din', 'Dinv39368' => 'din', 'Dinv40565' => 'din', 'Dinv41706' => 'din', 'Duzib052G0089' => 'dzi', 'Duzib116G0641' => 'dzi', 'Duzib132G0069' => 'dzi', 'Duzib132G1219' => 'dzi', 'Duzib147G0278' => 'dzi', 'Duzib160G0480' => 'dzi', 'Duzib170G0661' => 'dzi', 'Duzib177G0591' => 'dzi', 'Duzib187G1353' => 'dzi', 'Duzib192G0858' => 'dzi', 'Duzib192G0883' => 'dzi', 'Duzib213G0506' => 'dzi', 'Duzib235G0289' => 'dzi', 'Duzib251G0422' => 'dzi', 'ECA232G3898' => 'eca', 'ECA233G5950' => 'eca', 'ECA234G1699' => 'eca', 'ECA234G2421' => 'eca', 'ECA236G0426' => 'eca', 'ECA236G4331' => 'eca', 'ECA248G2573' => 'eca', 'EL10Ac1g00077' => 'bvu', 'EL10Ac1g01746' => 'bvu', 'EL10Ac2g03464' => 'bvu', 'EL10Ac4g08176' => 'bvu', 'EL10Ac7g17521' => 'bvu', 'EL10Ac8g20386' => 'bvu', 'EL10Ac9g21343' => 'bvu', 'EL10Ac9g22688' => 'bvu', 'Eucgr.B03434' => 'egr', 'Eucgr.D00618' => 'egr', 'Eucgr.E02395' => 'egr', 'Eucgr.F01129' => 'egr', 'Eucgr.F02622' => 'egr', 'Eucgr.F04207' => 'egr', 'FAN01G0570' => 'fan', 'FAN03G3351' => 'fan', 'FAN06G3702' => 'fan', 'FAN07G2149' => 'fan', 'FAN10G3758' => 'fan', 'FAN11G1170' => 'fan', 'FAN11G2050' => 'fan', 'FAN11G2724' => 'fan', 'FAN12G1700' => 'fan', 'FAN12G2028' => 'fan', 'FAN15G1160' => 'fan', 'FAN15G3063' => 'fan', 'FAN16G2540' => 'fan', 'FAN16G3077' => 'fan', 'FAN16G3624' => 'fan', 'FAN17G0221' => 'fan', 'FAN20G2492' => 'fan', 'FAN20G2905' => 'fan', 'FAN21G0548' => 'fan', 'FAN21G1300' => 'fan', 'FAN22G0077' => 'fan', 'FAN22G1315' => 'fan', 'FAN24G1280' => 'fan', 'FAN24G1445' => 'fan', 'FAN24G3527' => 'fan', 'FAN25G0464' => 'fan', 'FAN25G2885' => 'fan', 'FAN25G3270' => 'fan', 'FAN27G1101' => 'fan', 'FAN27G2846' => 'fan', 'FAN27G3524' => 'fan', 'FvH4_2g11770' => 'fve', 'FvH4_2g15630' => 'fve', 'FvH4_3g05570' => 'fve', 'FvH4_3g09110' => 'fve', 'FvH4_3g19940' => 'fve', 'FvH4_4g04821' => 'fve', 'FvH4_4g31480' => 'fve', 'FvH4_7g01740' => 'fve', 'Glyma.05G130400' => 'gma', 'Glyma.05G156400' => 'gma', 'Glyma.07G197000' => 'gma', 'Glyma.08G085151' => 'gma', 'Glyma.08G114500' => 'gma', 'Glyma.08G300400' => 'gma', 'Glyma.10G215800' => 'gma', 'Glyma.12G224400' => 'gma', 'Glyma.13G179300' => 'gma', 'Glyma.13G218151' => 'gma', 'Glyma.13G238800' => 'gma', 'Glyma.13G276900' => 'gma', 'Glyma.14G078200' => 'gma', 'Glyma.15G074500' => 'gma', 'Glyma.15G094100' => 'gma', 'Glyma.17G247200' => 'gma', 'Glyma.18G120100' => 'gma', 'Glyma.20G176000' => 'gma', 'Gohir.A01G063600' => 'ghi', 'Gohir.A01G170301' => 'ghi', 'Gohir.A02G060500' => 'ghi', 'Gohir.A05G133850' => 'ghi', 'Gohir.A05G161400' => 'ghi', 'Gohir.A06G012900' => 'ghi', 'Gohir.A06G035901' => 'ghi', 'Gohir.A06G127100' => 'ghi', 'Gohir.A06G210500' => 'ghi', 'Gohir.A08G008650' => 'ghi', 'Gohir.A09G072700' => 'ghi', 'Gohir.A09G088301' => 'ghi', 'Gohir.A10G040600' => 'ghi', 'Gohir.A12G036300' => 'ghi', 'Gohir.A12G143350' => 'ghi', 'Gohir.A12G165500' => 'ghi', 'Gohir.A13G145700' => 'ghi', 'Gohir.D01G050000' => 'ghi', 'Gohir.D01G051366' => 'ghi', 'Gohir.D01G161350' => 'ghi', 'Gohir.D02G065900' => 'ghi', 'Gohir.D05G164200' => 'ghi', 'Gohir.D05G355500' => 'ghi', 'Gohir.D06G010400' => 'ghi', 'Gohir.D06G111250' => 'ghi', 'Gohir.D06G132000' => 'ghi', 'Gohir.D06G210500' => 'ghi', 'Gohir.D07G165675' => 'ghi', 'Gohir.D08G062240' => 'ghi', 'Gohir.D08G086101' => 'ghi', 'Gohir.D08G138060' => 'ghi', 'Gohir.D09G072300' => 'ghi', 'Gohir.D10G041400' => 'ghi', 'Gohir.D11G191020' => 'ghi', 'Gohir.D11G212066' => 'ghi', 'Gohir.D12G036300' => 'ghi', 'Gohir.D12G168600' => 'ghi', 'Gohir.D13G150600' => 'ghi', 'Gorai.001G057300' => 'gra', 'Gorai.002G069900' => 'gra', 'Gorai.002G200000' => 'gra', 'Gorai.003G067600' => 'gra', 'Gorai.005G074800' => 'gra', 'Gorai.006G087300' => 'gra', 'Gorai.008G037500' => 'gra', 'Gorai.008G181400' => 'gra', 'Gorai.009G169400' => 'gra', 'Gorai.009G387900' => 'gra', 'Gorai.010G013300' => 'gra', 'Gorai.010G153800' => 'gra', 'Gorai.010G255800' => 'gra', 'Gorai.011G043700' => 'gra', 'Gorai.011G198900' => 'gra', 'Gorai.013G168400' => 'gra', 'GSVIVG01005212001' => 'vvi', 'GSVIVG01006163001' => 'vvi', 'GSVIVG01009625001' => 'vvi', 'GSVIVG01014338001' => 'vvi', 'GSVIVG01020005001' => 'vvi', 'GSVIVG01021450001' => 'vvi', 'GSVIVG01023975001' => 'vvi', 'GSVIVG01034490001' => 'vvi', 'HanXRQChr04g0112071' => 'han', 'HanXRQChr05g0131151' => 'han', 'HanXRQChr09g0262371' => 'han', 'HanXRQChr09g0268401' => 'han', 'HanXRQChr10g0279241' => 'han', 'HanXRQChr10g0297961' => 'han', 'HanXRQChr11g0326231' => 'han', 'HanXRQChr11g0328471' => 'han', 'HanXRQChr16g0507941' => 'han', 'HanXRQChr17g0560211' => 'han', 'Haze_02108' => 'cav', 'Haze_02428' => 'cav', 'Haze_05593' => 'cav', 'Haze_06448' => 'cav', 'Haze_09427' => 'cav', 'Haze_12022' => 'cav', 'Haze_17612' => 'cav', 'Haze_17928' => 'cav', 'Hma1.2p1_0032F.1_g019250' => 'hma', 'Hma1.2p1_0163F.1_g072690' => 'hma', 'Hma1.2p1_0265F.1_g106710' => 'hma', 'Hma1.2p1_0286F.1_g113970' => 'hma', 'Hma1.2p1_0363F.1_g136640' => 'hma', 'Hma1.2p1_0584F.1_g183470' => 'hma', 'Hma1.2p1_0885F.1_g232570' => 'hma', 'HPP92_006022' => 'vpl', 'HPP92_007320' => 'vpl', 'HPP92_011521' => 'vpl', 'HPP92_019387' => 'vpl', 'HPP92_024038' => 'vpl', 'Hund05891' => 'sun', 'Hund06450' => 'sun', 'Hund12053' => 'sun', 'Hund16800' => 'sun', 'Hund21222' => 'sun', 'Hund22896' => 'sun', 'Hund23746' => 'sun', 'Hund27083' => 'sun', 'Lalb_Chr02g0141831' => 'lal', 'Lalb_Chr02g0141841' => 'lal', 'Lalb_Chr05g0220411' => 'lal', 'Lalb_Chr06g0162081' => 'lal', 'Lalb_Chr09g0327651' => 'lal', 'Lalb_Chr13g0295051' => 'lal', 'Lalb_Chr15g0086801' => 'lal', 'Lalb_Chr16g0383781' => 'lal', 'Lalb_Chr16g0383791' => 'lal', 'Lalb_Chr18g0055441' => 'lal', 'Lalb_Chr18g0059611' => 'lal', 'Lalb_Chr20g0109661' => 'lal', 'Lalb_Chr20g0109831' => 'lal', 'Lalb_Chr20g0121871' => 'lal', 'Lalb_Chr22g0355361' => 'lal', 'Lalb_Chr25g0286371' => 'lal', 'Lj1A1187G43' => 'lonja', 'Lj1A1205T50' => 'lonja', 'Lj1A800G33' => 'lonja', 'Lj1C1187T7' => 'lonja', 'Lj1C843T11' => 'lonja', 'Lj1g0010940' => 'lja', 'Lj2A288T69' => 'lonja', 'Lj3g0024276' => 'lja', 'Lj4A47T76' => 'lonja', 'Lj4g0005805' => 'lja', 'Lj4g0006097' => 'lja', 'Lj4g0008528' => 'lja', 'Lj4g0024907' => 'lja', 'Lj5g0012472' => 'lja', 'Lj5g0018648' => 'lja', 'Lj6C789G1' => 'lonja', 'Lj6g0004000' => 'lja', 'Lj7A292G67' => 'lonja', 'Lj7A292T64' => 'lonja', 'Lj9A400T58' => 'lonja', 'Lsat_1_v5_gn_1_126181' => 'lsa', 'Lsat_1_v5_gn_4_123041' => 'lsa', 'Lsat_1_v5_gn_4_133620' => 'lsa', 'Lsat_1_v5_gn_4_53221' => 'lsa', 'Lsat_1_v5_gn_4_71961' => 'lsa', 'Lsat_1_v5_gn_7_105241' => 'lsa', 'Lsat_1_v5_gn_7_21361' => 'lsa', 'Lsat_1_v5_gn_7_28860' => 'lsa', 'Lsat_1_v5_gn_7_31260' => 'lsa', 'Lsat_1_v5_gn_8_52801' => 'lsa', 'Manes.02G191400' => 'mes', 'Manes.03G110100' => 'mes', 'Manes.04G071100' => 'mes', 'Manes.05G100500' => 'mes', 'Manes.05G164700' => 'mes', 'Manes.15G087000' => 'mes', 'Manes.15G121500' => 'mes', 'Manes.16G028300' => 'mes', 'Manes.17G046100' => 'mes', 'Manes.17G069800' => 'mes', 'Manes.18G100500' => 'mes', 'Mapoly0002s0109' => 'mpo', 'Mapoly0024s0007' => 'mpo', 'Mapoly0089s0032' => 'mpo', 'MBI04_g42241_MAGBIO' => 'mbi', 'MBI05_g11988_MAGBIO' => 'mbi', 'MBI05_g35452_MAGBIO' => 'mbi', 'MBI07_g30179_MAGBIO' => 'mbi', 'MBI07_g35859_MAGBIO' => 'mbi', 'MBI07_g35860_MAGBIO' => 'mbi', 'MBI07_g37166_MAGBIO' => 'mbi', 'MBI08_g18172_MAGBIO' => 'mbi', 'MBI09_g08441_MAGBIO' => 'mbi', 'MBI13_g01676_MAGBIO' => 'mbi', 'MBI14_g42955_MAGBIO' => 'mbi', 'MBI16_g13161_MAGBIO' => 'mbi', 'MBI17_g27204_MAGBIO' => 'mbi', 'MBI19_g21595_MAGBIO' => 'mbi', 'MD00G1148400' => 'mdo', 'MD02G1301200' => 'mdo', 'MD03G1227800' => 'mdo', 'MD05G1041100' => 'mdo', 'MD05G1124800' => 'mdo', 'MD05G1284000' => 'mdo', 'MD05G1338800' => 'mdo', 'MD05G1338900' => 'mdo', 'MD07G1022800' => 'mdo', 'MD10G1047500' => 'mdo', 'MD10G1127500' => 'mdo', 'MD10G1262300' => 'mdo', 'MD10G1293800' => 'mdo', 'MD16G1074300' => 'mdo', 'Medtr1g021670' => 'mtr', 'Medtr1g096320' => 'mtr', 'Medtr2g013690' => 'mtr', 'Medtr2g019450' => 'mtr', 'Medtr2g085170' => 'mtr', 'Medtr4g088785' => 'mtr', 'Medtr8g055930' => 'mtr', 'Medtr8g085850' => 'mtr', 'MELO3C002605.2' => 'cme', 'MELO3C003891.2' => 'cme', 'MELO3C004012.2' => 'cme', 'MELO3C007134.2' => 'cme', 'MELO3C008118.2' => 'cme', 'MELO3C016700.2' => 'cme', 'MELO3C024127.2' => 'cme', 'MELO3C033361.2' => 'cme', 'MELO3C033362.2' => 'cme', 'Migut.C00430' => 'egut', 'Migut.C01246' => 'egut', 'Migut.E00101' => 'egut', 'Migut.H01486' => 'egut', 'Migut.H01939' => 'egut', 'Migut.K00360' => 'egut', 'Migut.M00910' => 'egut', 'Migut.M01139' => 'egut', 'Migut.N02677' => 'egut', 'MSTRG.13252' => 'ama', 'MSTRG.14701' => 'ama', 'MSTRG.1521' => 'ama', 'MSTRG.15884' => 'ama', 'MSTRG.16242' => 'ama', 'MSTRG.22285' => 'ama', 'MSTRG.22444' => 'ama', 'MSTRG.2349' => 'ama', 'MSTRG.26308' => 'ama', 'MSTRG.28296' => 'ama', 'MSTRG.9895' => 'ama', 'Nitab4.5_0000110g0060' => 'nta', 'Nitab4.5_0000420g0130' => 'nta', 'Nitab4.5_0000422g0030' => 'nta', 'Nitab4.5_0000560g0180' => 'nta', 'Nitab4.5_0000703g0100' => 'nta', 'Nitab4.5_0000786g0200' => 'nta', 'Nitab4.5_0001336g0020' => 'nta', 'Nitab4.5_0001796g0030' => 'nta', 'Nitab4.5_0003348g0060' => 'nta', 'Nitab4.5_0003698g0040' => 'nta', 'Nitab4.5_0003942g0090' => 'nta', 'Nitab4.5_0004775g0070' => 'nta', 'Nitab4.5_0004864g0030' => 'nta', 'Nitab4.5_0005615g0020' => 'nta', 'Nitab4.5_0009288g0030' => 'nta', 'Nitab4.5_0009341g0010' => 'nta', 'Nitab4.5_0009535g0010' => 'nta', 'Nn1g03995' => 'nnu', 'Nn1g04100' => 'nnu', 'Nn1g06530' => 'nnu', 'Nn3g16404' => 'nnu', 'Nn3g17212' => 'nnu', 'Nn3g20776' => 'nnu', 'Nn3g21923' => 'nnu', 'Nn5g27737' => 'nnu', 'Nn5g29461' => 'nnu', 'Nn7g38355' => 'nnu', 'Nn8g39873' => 'nnu', 'Oeu000548.2' => 'oeu', 'Oeu004672.1' => 'oeu', 'Oeu015605.2' => 'oeu', 'Oeu016092.1' => 'oeu', 'Oeu017879.3' => 'oeu', 'Oeu024910.1' => 'oeu', 'Oeu028965.1' => 'oeu', 'Oeu031269.1' => 'oeu', 'Oeu031270.1' => 'oeu', 'Oeu032535.1' => 'oeu', 'Oeu034151.1' => 'oeu', 'Oeu034152.1' => 'oeu', 'Oeu034588.2' => 'oeu', 'Oeu050846.1' => 'oeu', 'Oeu050849.2' => 'oeu', 'Oeu051063.2' => 'oeu', 'Oeu052368.1' => 'oeu', 'Oeu052370.1' => 'oeu', 'Os01g0210400' => 'osa', 'Os01g0304300' => 'osa', 'Os01g0749100' => 'osa', 'Os02g0745800' => 'osa', 'Os03g0769050' => 'osa', 'Os05g0531500' => 'osa', 'Os06g0724300' => 'osa', 'Os11g0198100' => 'osa', 'Peaxi162Scf00069g01425' => 'pax', 'Peaxi162Scf00280g00811' => 'pax', 'Peaxi162Scf00310g00615' => 'pax', 'Peaxi162Scf00362g00542' => 'pax', 'Peaxi162Scf00461g00310' => 'pax', 'Peaxi162Scf00530g00118' => 'pax', 'Peaxi162Scf00541g00057' => 'pax', 'Peaxi162Scf00661g00017' => 'pax', 'Peaxi162Scf00926g00027' => 'pax', 'Peaxi162Scf01064g00263' => 'pax', 'Peaxi162Scf01211g00135' => 'pax', 'PGR004G2336' => 'pgr', 'PGR042G0327' => 'pgr', 'PGR042G1957' => 'pgr', 'PGR042G2003' => 'pgr', 'PGR042G3929' => 'pgr', 'PGR083G1137' => 'pgr', 'PGR083G1364' => 'pgr', 'PGSC0003DMG400003381' => 'stu', 'PGSC0003DMG400003417' => 'stu', 'PGSC0003DMG400008981' => 'stu', 'PGSC0003DMG400012417' => 'stu', 'PGSC0003DMG400012823' => 'stu', 'PGSC0003DMG400016885' => 'stu', 'PGSC0003DMG400022812' => 'stu', 'PGSC0003DMG400029726' => 'stu', 'PGSC0003DMG401009243' => 'stu', 'PGSC0003DMG401031505' => 'stu', 'PGSC0003DMG402031505' => 'stu', 'Phvul.001G017600' => 'pvu', 'Phvul.002G193500' => 'pvu', 'Phvul.002G228900' => 'pvu', 'Phvul.002G236800' => 'pvu', 'Phvul.003G049500' => 'pvu', 'Phvul.005G072000' => 'pvu', 'Phvul.006G164800' => 'pvu', 'Phvul.006G185100' => 'pvu', 'Phvul.007G090000' => 'pvu', 'Potri.001G399800' => 'ptr', 'Potri.002G149900' => 'ptr', 'Potri.004G044100' => 'ptr', 'Potri.004G177600' => 'ptr', 'Potri.009G138000' => 'ptr', 'Potri.010G094000' => 'ptr', 'Potri.011G053000' => 'ptr', 'Potri.011G119300' => 'ptr', 'Potri.013G113700' => 'ptr', 'Potri.018G107800' => 'ptr', 'Potri.019G084100' => 'ptr', 'Pp3c14_23720' => 'ppa', 'Pp3c16_6340' => 'ppa', 'Pp3c23_13420' => 'ppa', 'Pp3c24_2740' => 'ppa', 'Pp3c25_860' => 'ppa', 'Pp3c8_21750' => 'ppa', 'Prupe.1G273000' => 'ppe', 'Prupe.1G273700' => 'ppe', 'Prupe.1G274100' => 'ppe', 'Prupe.2G023300' => 'ppe', 'Prupe.4G048000' => 'ppe', 'Prupe.4G080400' => 'ppe', 'Prupe.4G181200' => 'ppe', 'Prupe.8G056900' => 'ppe', 'Prupe.8G168700' => 'ppe', 'Psat1g189080' => 'psa', 'Psat1g204760' => 'psa', 'Psat4g175560' => 'psa', 'Psat4g177720' => 'psa', 'Psat5g244240' => 'psa', 'Psat6g010720' => 'psa', 'Psat6g187200' => 'psa', 'Psat7g072040' => 'psa', 'PSO017G3501' => 'pso', 'PSO063G2148' => 'pso', 'PSO063G5608' => 'pso', 'PSO210G6392' => 'pso', 'PSO541G2319' => 'pso', 'PSO541G2836' => 'pso', 'PSO541G4012' => 'pso', 'PSO541G6253' => 'pso', 'PSO675G0580' => 'pso', 'PSO675G0856' => 'pso', 'PSO675G5635' => 'pso', 'PSO675G9157' => 'pso', 'PSO832G1660' => 'pso', 'PSO832G1969' => 'pso', 'QL02p007186' => 'qlo', 'QL02p033904' => 'qlo', 'QL03p064391' => 'qlo', 'QL05p040593' => 'qlo', 'QL05p058242' => 'qlo', 'QL08p021825' => 'qlo', 'QL11p004981' => 'qlo', 'RcHm_v2.0_Chr1g0318301' => 'rch', 'RcHm_v2.0_Chr4g0418501' => 'rch', 'RcHm_v2.0_Chr4g0439971' => 'rch', 'RcHm_v2.0_Chr5g0008541' => 'rch', 'RcHm_v2.0_Chr5g0014101' => 'rch', 'RcHm_v2.0_Chr5g0014131' => 'rch', 'RcHm_v2.0_Chr5g0033621' => 'rch', 'RcHm_v2.0_Chr6g0272041' => 'rch', 'RcHm_v2.0_Chr6g0278831' => 'rch', 'Rhsim02G0130400' => 'rsi', 'Rhsim02G0171100' => 'rsi', 'Rhsim05G0053000' => 'rsi', 'Rhsim05G0053100' => 'rsi', 'Rhsim06G0096500' => 'rsi', 'Rhsim06G0096600' => 'rsi', 'Rhsim06G0199100' => 'rsi', 'Rhsim12G0062300' => 'rsi', 'Rhsim12G0062800' => 'rsi', 'Sabra02G0118600' => 'sbr', 'Sabra04G0027300' => 'sbr', 'Sabra04G0119500' => 'sbr', 'Sabra08G0112500' => 'sbr', 'Sabra11G0036800' => 'sbr', 'Sabra11G0103800' => 'sbr', 'Sabra13G0096300' => 'sbr', 'Sabra16G0262300' => 'sbr', 'Sabra18G0091700' => 'sbr', 'Sabra19G0095400' => 'sbr', 'SalBow6G3080' => 'sbo', 'SalBow7G1157' => 'sbo', 'SalBow7G2123' => 'sbo', 'SalBow7G2285' => 'sbo', 'SalBow7G3537' => 'sbo', 'SalBow8G2947' => 'sbo', 'SalBow8G4463' => 'sbo', 'SalBow8G5466' => 'sbo', 'Sc01g0001750' => 'sci', 'Sc02g0006640' => 'sci', 'Sc02g0006670' => 'sci', 'Sc04g0008220' => 'sci', 'Sc05g0006190' => 'sci', 'Sc08g0002760' => 'sci', 'Sc17g0006170' => 'sci', 'Sc22g0002050' => 'sci', 'Sc23g0001190' => 'sci', 'Sc24g0000980' => 'sci', 'Sed0006245' => 'sed', 'Sed0007543' => 'sed', 'Sed0009411' => 'sed', 'Sed0010765' => 'sed', 'Sed0012944' => 'sed', 'Sed0014682' => 'sed', 'Sed0016174' => 'sed', 'Sed0016796' => 'sed', 'Sed0020317' => 'sed', 'Sed0021467' => 'sed', 'SEGI_01316' => 'sgi', 'SEGI_03374' => 'sgi', 'SEGI_16265' => 'sgi', 'SEGI_18569' => 'sgi', 'SEGI_20351' => 'sgi', 'SEGI_26395' => 'sgi', 'SEGI_29469' => 'sgi', 'SEGI_34771' => 'sgi', 'SEGI_36769' => 'sgi', 'SEGI_37139' => 'sgi', 'SGA_v2.0_scaffold100G29687' => 'sas', 'SGA_v2.0_scaffold118G32472' => 'sas', 'SGA_v2.0_scaffold14G07051' => 'sas', 'SGA_v2.0_scaffold183G39845' => 'sas', 'SGA_v2.0_scaffold1G00174' => 'sas', 'SGA_v2.0_scaffold22G09714' => 'sas', 'SGA_v2.0_scaffold333G48992' => 'sas', 'SGA_v2.0_scaffold46G17491' => 'sas', 'SGA_v2.0_scaffold49G18294' => 'sas', 'SGA_v2.0_scaffold63G21658' => 'sas', 'SHI01741' => 'shi', 'SHI05771' => 'shi', 'SHI18077' => 'shi', 'SHI20525' => 'shi', 'SHI20527' => 'shi', 'SHI20528' => 'shi', 'SMO172G0185' => 'smo', 'SMO198G0020' => 'smo', 'SMO351G0006' => 'smo', 'SMO356G0118' => 'smo', 'SMO358G0296' => 'smo', 'SMO367G0079' => 'smo', 'SMO367G1277' => 'smo', 'Solyc01g014220.3' => 'sly', 'Solyc01g111770.2' => 'sly', 'Solyc02g078180.3' => 'sly', 'Solyc03g006430.3' => 'sly', 'Solyc03g006456.1' => 'sly', 'Solyc03g079860.2' => 'sly', 'Solyc04g079770.3' => 'sly', 'Solyc05g007430.4' => 'sly', 'Solyc07g063150.3' => 'sly', 'Solyc08g016620.3' => 'sly', 'Solyc09g057590.3' => 'sly', 'Solyc09g057600.1' => 'sly', 'Solyc10g009050.3' => 'sly', 'Solyc11g017420.2' => 'sly', 'Sopen01g053810' => 'spe', 'Sopen02g023040' => 'spe', 'Sopen03g002440' => 'spe', 'Sopen04g033350' => 'spe', 'Sopen05g003310' => 'spe', 'Sopen07g004050' => 'spe', 'Sopen07g031340' => 'spe', 'Sopen08g006990' => 'spe', 'Sopen10g004830' => 'spe', 'Sopen11g009370' => 'spe', 'Sp1g24450' => 'spa', 'Sp1g29670' => 'spa', 'Sp1g39600' => 'spa', 'Sp2g11080' => 'spa', 'Sp2g13970' => 'spa', 'Sp4g16130' => 'spa', 'Sp6g13080' => 'spa', 'Sp7g37270' => 'spa', 'TAR371G0065' => 'tar', 'TAR376G0340' => 'tar', 'TAR376G0435' => 'tar', 'TAR381G0002' => 'tar', 'TAR381G1236' => 'tar', 'TAR624G0055' => 'tar', 'TAR624G0324' => 'tar', 'TAR624G0696' => 'tar', 'TAR624G0906' => 'tar', 'TAR625G0107' => 'tar', 'TAR626G0015' => 'tar', 'TAR626G1356' => 'tar', 'TAR627G0888' => 'tar', 'TAR628G0399' => 'tar', 'TAR628G1327' => 'tar', 'TAR629G2831' => 'tar', 'TAR629G2874' => 'tar', 'TAR633G1432' => 'tar', 'TAR633G2771' => 'tar', 'THA.LOC104803394' => 'tha', 'THA.LOC104805153' => 'tha', 'THA.LOC104806784' => 'tha', 'THA.LOC104810473' => 'tha', 'THA.LOC104813100' => 'tha', 'THA.LOC104814215' => 'tha', 'THA.LOC104815554' => 'tha', 'THA.LOC104820544' => 'tha', 'THA.LOC104824754' => 'tha', 'THA.LOC104827717' => 'tha', 'Thecc.02G031400' => 'tca', 'Thecc.02G055900' => 'tca', 'Thecc.02G350800' => 'tca', 'Thecc.06G150900' => 'tca', 'Thecc.06G186600' => 'tca', 'Thecc.07G089600' => 'tca', 'Thecc.08G020400' => 'tca', 'Thecc.08G182100' => 'tca', 'Thhalv10000873m.g' => 'esa', 'Thhalv10004185m.g' => 'esa', 'Thhalv10006981m.g' => 'esa', 'Thhalv10007204m.g' => 'esa', 'Thhalv10011374m.g' => 'esa', 'Thhalv10013482m.g' => 'esa', 'Thhalv10017801m.g' => 'esa', 'Thhalv10024983m.g' => 'esa', 'TPR.G12072' => 'tpr', 'TPR.G15769' => 'tpr', 'TPR.G16504' => 'tpr', 'TPR.G16506' => 'tpr', 'TPR.G24345' => 'tpr', 'TPR.G26666' => 'tpr', 'TPR.G27320' => 'tpr', 'TPR.G31819' => 'tpr', 'TPR.G38879' => 'tpr', 'TPR.G39015' => 'tpr', 'TPR.G8819' => 'tpr', 'TWI09G0924' => 'twi', 'TWI12G0811' => 'twi', 'TWI12G1294' => 'twi', 'TWI31G0150' => 'twi', 'TWI36G1262' => 'twi', 'TWI38G1287' => 'twi', 'TWI38G1633' => 'twi', 'TWI38G1982' => 'twi', 'TWI39G0116' => 'twi', 'TWI60G1011' => 'twi', 'TWI63G0171' => 'twi', 'TWI73G0839' => 'twi', 'TWI79G1511' => 'twi', 'unitig_0.g915' => 'ugi', 'unitig_0.g916' => 'ugi', 'unitig_21.g20219' => 'ugi', 'unitig_21.g20416' => 'ugi', 'unitig_578.g16132' => 'ugi', 'unitig_578.g16718' => 'ugi', 'unitig_62.g23481' => 'ugi', 'unitig_744.g24535' => 'ugi', 'unitig_749.g13525' => 'ugi', 'vmacro01248' => 'vma', 'vmacro02290' => 'vma', 'vmacro10946' => 'vma', 'vmacro11865' => 'vma', 'vmacro12493' => 'vma', 'vmacro17322' => 'vma', 'vmacro21599' => 'vma', 'vmacro23041' => 'vma', 'VMungo0251G0004' => 'vmu', 'VMungo0251G2639' => 'vmu', 'VMungo0251G2967' => 'vmu', 'VMungo0540G0864' => 'vmu', 'VMungo0540G1569' => 'vmu', 'VMungo0647G0317' => 'vmu', 'VMungo0720G1373' => 'vmu', 'VMungo0720G1508' => 'vmu', 'VMungo1080G0485' => 'vmu', 'VMungo1215G3177' => 'vmu', 'Zm00001eb112600' => 'zma', 'Zm00001eb120220' => 'zma', 'Zm00001eb153240' => 'zma', 'Zm00001eb168880' => 'zma', 'Zm00001eb213920' => 'zma', 'Zm00001eb228280' => 'zma', 'Zm00001eb254580' => 'zma', 'Zm00001eb272180' => 'zma', 'Zm00001eb293190' => 'zma', 'Zm00001eb322930' => 'zma', 'Zm00001eb353360' => 'zma', 'Zm00001eb353390' => 'zma', 'Zm00001eb353430' => 'zma', 'Zm00001eb353440' => 'zma', 'Zm00001eb353780' => 'zma' ) $gf_id = 'HOM05D000499' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000499' ) $data_identifier = 'HOM05D000499' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 29, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 12, 'amhyb' => (int) 8, 'aly' => (int) 12, 'aox' => (int) 9, 'arhy' => (int) 26, 'ath' => (int) 8, 'atr' => (int) 7, 'acertr' => (int) 10, 'cqu' => (int) 15, 'bca' => (int) 29, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 11, 'cansat' => (int) 8, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 9, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 8, 'cpa' => (int) 10, 'csa' => (int) 7, 'camsi' => (int) 20, 'dca' => (int) 8, 'din' => (int) 12, 'dzi' => (int) 14, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 6, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 38, 'gra' => (int) 16, 'vvi' => (int) 8, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 5, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 11, 'lja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 11, 'mpo' => (int) 3, 'mbi' => (int) 14, 'mdo' => (int) 14, 'mtr' => (int) 8, 'cme' => (int) 9, 'egut' => (int) 9, 'ama' => (int) 11, 'nta' => (int) 17, 'nnu' => (int) 11, 'oeu' => (int) 18, 'osa' => (int) 8, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 6, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 9, 'rsi' => (int) 9, 'sbr' => (int) 10, 'sbo' => (int) 8, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 10, 'sas' => (int) 10, 'shi' => (int) 6, 'smo' => (int) 7, 'sly' => (int) 14, 'spe' => (int) 10, 'spa' => (int) 8, 'tar' => (int) 19, 'tha' => (int) 10, 'tca' => (int) 8, 'esa' => (int) 8, 'tpr' => (int) 11, 'twi' => (int) 13, 'ugi' => (int) 9, 'vma' => (int) 8, 'vmu' => (int) 10, 'zma' => (int) 15 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb353780' $species_info = array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ) $local_species = 'chi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000499', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1066', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p29780' => 'bna', 'A02p33180' => 'bna', 'A03p16470' => 'bna', 'A03p66010' => 'bna', 'A04p25970' => 'bna', 'A06p01270' => 'bna', 'A06p46080' => 'bna', 'A07p11400' => 'bna', 'A08p01840' => 'bna', 'A08p08230' => 'bna', 'A08p25740' => 'bna', 'A09p32070' => 'bna', 'A09p37830' => 'bna', 'A09p42840' => 'bna', 'A09p42850' => 'bna', 'Aa31LG10G2060' => 'aar', 'Aa31LG2G7410' => 'aar', 'Aa31LG6G10200' => 'aar', 'Aa31LG6G16680' => 'aar', 'Aa31LG6G8470' => 'aar', 'Aa31LG9G12730' => 'aar', 'Aa31LG9G13680' => 'aar', 'Aa31LG9G14920' => 'aar', 'Aa31LG9G6650' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4977' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5467' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3254' => 'aag', 'Actinidia02578' => 'ach', 'Actinidia07693' => 'ach', 'Actinidia08413' => 'ach', 'Actinidia08414' => 'ach', 'Actinidia15289' => 'ach', 'Actinidia19871' => 'ach', 'Actinidia21475' => 'ach', 'Actinidia22576' => 'ach', 'Actinidia28327' => 'ach', 'Actinidia32491' => 'ach', 'Actinidia39463' => 'ach', 'Actinidia39571' => 'ach', 'Ah.01g013750' => 'amhyb', 'Ah.01g023210' => 'amhyb', 'Ah.04g164850' => 'amhyb', 'Ah.05g178060' => 'amhyb', 'Ah.07g204270' => 'amhyb', 'Ah.07g208480' => 'amhyb', 'Ah.09g237410' => 'amhyb', 'Ah.14g089460' => 'amhyb', 'AL1G41790' => 'aly', 'AL1G49050' => 'aly', 'AL1G53810' => 'aly', 'AL1G61400' => 'aly', 'AL4G18580' => 'aly', 'AL5G12510' => 'aly', 'AL5G12540' => 'aly', 'AL6G43230' => 'aly', 'AL7G10370' => 'aly', 'AL7G19250' => 'aly', 'AL8G12240' => 'aly', 'AL8G18540' => 'aly', 'Aqoxy1G02409' => 'aox', 'Aqoxy2G03993' => 'aox', 'Aqoxy3G03357' => 'aox', 'Aqoxy4G00785' => 'aox', 'Aqoxy5G02598' => 'aox', 'Aqoxy6G00132' => 'aox', 'Aqoxy7G01776' => 'aox', 'Aqoxy7G02316' => 'aox', 'Aqoxy7G03973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.12AFKW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B8730' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27IQR1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3F75VG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3RE0GA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41TCQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.527VTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FIR39' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5W8UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DA38EV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ63HS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H1I32C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HC27T5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4M8AP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7N3CZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9UVDZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LS1NQA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT1D4B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SKC4TM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCFV76' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF9Q1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQWD9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1ZM88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WE07RT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YCK7VH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJE6Q6' => 'arhy', 'AT1G28240' => 'ath', 'AT1G34550' => 'ath', 'AT1G53040' => 'ath', 'AT2G02910' => 'ath', 'AT4G09630' => 'ath', 'AT4G38500' => 'ath', 'AT5G42660' => 'ath', 'AT5G46220' => 'ath', 'ATR0152G026' => 'atr', 'ATR0564G343' => 'atr', 'ATR0706G151' => 'atr', 'ATR0733G207' => 'atr', 'ATR0751G234' => 'atr', 'ATR0807G048' => 'atr', 'ATR1091G084' => 'atr', 'Atru.chr10.1229' => 'acertr', 'Atru.chr10.1230' => 'acertr', 'Atru.chr10.1874' => 'acertr', 'Atru.chr11.1808' => 'acertr', 'Atru.chr13.1795' => 'acertr', 'Atru.chr13.570' => 'acertr', 'Atru.chr2.2608' => 'acertr', 'Atru.chr2.2609' => 'acertr', 'Atru.chr5.3428' => 'acertr', 'Atru.chr8.1171' => 'acertr', 'AUR62004651' => 'cqu', 'AUR62008675' => 'cqu', 'AUR62010014' => 'cqu', 'AUR62013004' => 'cqu', 'AUR62014825' => 'cqu', 'AUR62015015' => 'cqu', 'AUR62015151' => 'cqu', 'AUR62017020' => 'cqu', 'AUR62019422' => 'cqu', 'AUR62023570' => 'cqu', 'AUR62025571' => 'cqu', 'AUR62029098' => 'cqu', 'AUR62033863' => 'cqu', 'AUR62034296' => 'cqu', 'AUR62040075' => 'cqu', 'BcaB02g07334' => 'bca', 'BcaB02g10575' => 'bca', 'BcaB03g12119' => 'bca', 'BcaB03g12120' => 'bca', 'BcaB03g13945' => 'bca', 'BcaB04g17123' => 'bca', 'BcaB04g17867' => 'bca', 'BcaB04g19839' => 'bca', 'BcaB07g30317' => 'bca', 'BcaB07g32432' => 'bca', 'BcaB07g33362' => 'bca', 'BcaB08g36611' => 'bca', 'BcaC01g00028' => 'bca', 'BcaC01g01356' => 'bca', 'BcaC01g02034' => 'bca', 'BcaC01g06051' => 'bca', 'BcaC03g16839' => 'bca', 'BcaC03g17176' => 'bca', 'BcaC05g26829' => 'bca', 'BcaC06g31490' => 'bca', 'BcaC06g35344' => 'bca', 'BcaC06g36570' => 'bca', 'BcaC07g37537' => 'bca', 'BcaC08g43491' => 'bca', 'BcaC08g43773' => 'bca', 'BcaNung00234' => 'bca', 'BcaNung01982' => 'bca', 'BcaNung03707' => 'bca', 'BcaNung06454' => 'bca', 'BolC2t10762H' => 'bol', 'BolC2t11191H' => 'bol', 'BolC3t14322H' => 'bol', 'BolC3t19747H' => 'bol', 'BolC3t21425H' => 'bol', 'BolC4t27800H' => 'bol', 'BolC5t31423H' => 'bol', 'BolC6t35951H' => 'bol', 'BolC6t36282H' => 'bol', 'BolC7t40678H' => 'bol', 'BolC7t40679H' => 'bol', 'BolC7t42222H' => 'bol', 'BolC7t43492H' => 'bol', 'BolC7t46785H' => 'bol', 'BolC8t47853H' => 'bol', 'BolC9t56805H' => 'bol', 'BraA02t08000Z' => 'bra', 'BraA02t08341Z' => 'bra', 'BraA03t10936Z' => 'bra', 'BraA03t15657Z' => 'bra', 'BraA04t18100Z' => 'bra', 'BraA05t20523Z' => 'bra', 'BraA06t23353Z' => 'bra', 'BraA06t27473Z' => 'bra', 'BraA06t27769Z' => 'bra', 'BraA07t28928Z' => 'bra', 'BraA08t32236Z' => 'bra', 'BraA08t32841Z' => 'bra', 'BraA08t34524Z' => 'bra', 'BraA09t38742Z' => 'bra', 'BraA09t39295Z' => 'bra', 'C02p47180' => 'bna', 'C02p50990' => 'bna', 'C03p19360' => 'bna', 'C03p74950' => 'bna', 'C03p91000' => 'bna', 'C04p63260' => 'bna', 'C05p27050' => 'bna', 'C06p08750' => 'bna', 'C06p11490' => 'bna', 'C07p02820' => 'bna', 'C07p17180' => 'bna', 'C07p29440' => 'bna', 'C07p63730' => 'bna', 'C09p39260' => 'bna', 'CAN.G1164.34' => 'can', 'CAN.G1164.39' => 'can', 'CAN.G1530.3' => 'can', 'CAN.G162.61' => 'can', 'CAN.G176.6' => 'can', 'CAN.G289.49' => 'can', 'CAN.G370.21' => 'can', 'CAN.G370.22' => 'can', 'CAN.G371.117' => 'can', 'CAN.G58.37' => 'can', 'CAN.G588.98' => 'can', 'CANSAT21G2266' => 'cansat', 'CANSAT25G2799' => 'cansat', 'CANSAT35G0862' => 'cansat', 'CANSAT35G1704' => 'cansat', 'CANSAT35G1760' => 'cansat', 'CANSAT56G3971' => 'cansat', 'CANSAT56G4116' => 'cansat', 'CANSAT80G1259' => 'cansat', 'CARHR027730' => 'chi', 'CARHR033880' => 'chi', 'CARHR043270' => 'chi', 'CARHR145330' => 'chi', 'CARHR145340' => 'chi', 'CARHR175570' => 'chi', 'CARHR181570' => 'chi', 'CARHR258470' => 'chi', 'CARHR260490' => 'chi', 'CARHR294220' => 'chi', 'Carub.0001s2668' => 'cru', 'Carub.0001s3257' => 'cru', 'Carub.0001s4220' => 'cru', 'Carub.0005s0179' => 'cru', 'Carub.0006s2807' => 'cru', 'Carub.0007s0039' => 'cru', 'Carub.0008s0169' => 'cru', 'Carub.0008s0636' => 'cru', 'Ca_00338_v3' => 'car', 'Ca_00542_v3' => 'car', 'Ca_01844_v3' => 'car', 'Ca_10611_v3' => 'car', 'Ca_13326_v3' => 'car', 'Ca_17944_v3' => 'car', 'Ca_18546_v3' => 'car', 'Ca_24219_v3' => 'car', 'Ca_29972_v3' => 'car', 'CBR_g3681' => 'cbr', 'CBR_g40021' => 'cbr', 'Cc01_g08140' => 'ccan', 'Cc02_g13410' => 'ccan', 'Cc02_g37480' => 'ccan', 'Cc05_g12030' => 'ccan', 'Cc09_g03370' => 'ccan', 'Cc09_g10300' => 'ccan', 'Cc10_g03530' => 'ccan', 'Cc10_g11380' => 'ccan', 'CDE01G0176' => 'cde', 'CDE02G0675' => 'cde', 'CDE02G0942' => 'cde', 'CDE02G1153' => 'cde', 'CDE02G4177' => 'cde', 'CDE04G2117' => 'cde', 'CDE04G2736' => 'cde', 'CDE08G1161' => 'cde', 'CDE09G1238' => 'cde', 'Cfa000467' => 'cfa', 'Cfa000947' => 'cfa', 'Cfa004969' => 'cfa', 'Cfa005284' => 'cfa', 'Cfa008993' => 'cfa', 'Cfa018187' => 'cfa', 'Cfa018454' => 'cfa', 'Cfa020585' => 'cfa', 'Ciclev10000424m.g' => 'ccl', 'Ciclev10003605m.g' => 'ccl', 'Ciclev10007828m.g' => 'ccl', 'Ciclev10014620m.g' => 'ccl', 'Ciclev10015169m.g' => 'ccl', 'Ciclev10018291m.g' => 'ccl', 'Ciclev10028256m.g' => 'ccl', 'Ciclev10033822m.g' => 'ccl', 'CiPaw.05G060300' => 'cil', 'CiPaw.05G085000' => 'cil', 'CiPaw.06G083700' => 'cil', 'CiPaw.06G120300' => 'cil', 'CiPaw.09G060500' => 'cil', 'CiPaw.09G123800' => 'cil', 'CiPaw.11G169700' => 'cil', 'CiPaw.12G118300' => 'cil', 'CiPaw.15G071000' => 'cil', 'CiPaw.15G081900' => 'cil', 'ClCG01G024610' => 'cla', 'ClCG03G006070' => 'cla', 'ClCG05G019250' => 'cla', 'ClCG09G009500' => 'cla', 'ClCG11G008200' => 'cla', 'ClCG11G018080' => 'cla', 'COL.COLO4_17373' => 'col', 'COL.COLO4_22994' => 'col', 'COL.COLO4_26389' => 'col', 'COL.COLO4_27170' => 'col', 'COL.COLO4_31074' => 'col', 'COL.COLO4_31465' => 'col', 'COL.COLO4_36438' => 'col', 'COL.COLO4_36439' => 'col', 'Cpa.g.c38781' => 'cpa', 'Cpa.g.sc128.12' => 'cpa', 'Cpa.g.sc166.7' => 'cpa', 'Cpa.g.sc166.8' => 'cpa', 'Cpa.g.sc20.111' => 'cpa', 'Cpa.g.sc27.31' => 'cpa', 'Cpa.g.sc64.36' => 'cpa', 'Cpa.g.sc64.37' => 'cpa', 'Cpa.g.sc66.49' => 'cpa', 'Cpa.g.sc80.64' => 'cpa', 'CsaV3_1G012320' => 'csa', 'CsaV3_2G008480' => 'csa', 'CsaV3_2G033450' => 'csa', 'CsaV3_3G044830' => 'csa', 'CsaV3_4G033710' => 'csa', 'CsaV3_6G051730' => 'csa', 'CsaV3_7G025350' => 'csa', 'CSS0001067' => 'camsi', 'CSS0005996' => 'camsi', 'CSS0006590' => 'camsi', 'CSS0009673' => 'camsi', 'CSS0010201' => 'camsi', 'CSS0010549' => 'camsi', 'CSS0011364' => 'camsi', 'CSS0014473' => 'camsi', 'CSS0014961' => 'camsi', 'CSS0020191' => 'camsi', 'CSS0021165' => 'camsi', 'CSS0022306' => 'camsi', 'CSS0030591' => 'camsi', 'CSS0030696' => 'camsi', 'CSS0032653' => 'camsi', 'CSS0037487' => 'camsi', 'CSS0041102' => 'camsi', 'CSS0041261' => 'camsi', 'CSS0046246' => 'camsi', 'CSS0049256' => 'camsi', 'DCAR_004075' => 'dca', 'DCAR_011538' => 'dca', 'DCAR_019553' => 'dca', 'DCAR_020952' => 'dca', 'DCAR_021739' => 'dca', 'DCAR_027407' => 'dca', 'DCAR_027913' => 'dca', 'DCAR_028066' => 'dca', 'Dinv05899' => 'din', 'Dinv07563' => 'din', 'Dinv08010' => 'din', 'Dinv14125' => 'din', 'Dinv20172' => 'din', 'Dinv30743' => 'din', 'Dinv31229' => 'din', 'Dinv34162' => 'din', 'Dinv36028' => 'din', 'Dinv39368' => 'din', 'Dinv40565' => 'din', 'Dinv41706' => 'din', 'Duzib052G0089' => 'dzi', 'Duzib116G0641' => 'dzi', 'Duzib132G0069' => 'dzi', 'Duzib132G1219' => 'dzi', 'Duzib147G0278' => 'dzi', 'Duzib160G0480' => 'dzi', 'Duzib170G0661' => 'dzi', 'Duzib177G0591' => 'dzi', 'Duzib187G1353' => 'dzi', 'Duzib192G0858' => 'dzi', 'Duzib192G0883' => 'dzi', 'Duzib213G0506' => 'dzi', 'Duzib235G0289' => 'dzi', 'Duzib251G0422' => 'dzi', 'ECA232G3898' => 'eca', 'ECA233G5950' => 'eca', 'ECA234G1699' => 'eca', 'ECA234G2421' => 'eca', 'ECA236G0426' => 'eca', 'ECA236G4331' => 'eca', 'ECA248G2573' => 'eca', 'EL10Ac1g00077' => 'bvu', 'EL10Ac1g01746' => 'bvu', 'EL10Ac2g03464' => 'bvu', 'EL10Ac4g08176' => 'bvu', 'EL10Ac7g17521' => 'bvu', 'EL10Ac8g20386' => 'bvu', 'EL10Ac9g21343' => 'bvu', 'EL10Ac9g22688' => 'bvu', 'Eucgr.B03434' => 'egr', 'Eucgr.D00618' => 'egr', 'Eucgr.E02395' => 'egr', 'Eucgr.F01129' => 'egr', 'Eucgr.F02622' => 'egr', 'Eucgr.F04207' => 'egr', 'FAN01G0570' => 'fan', 'FAN03G3351' => 'fan', 'FAN06G3702' => 'fan', 'FAN07G2149' => 'fan', 'FAN10G3758' => 'fan', 'FAN11G1170' => 'fan', 'FAN11G2050' => 'fan', 'FAN11G2724' => 'fan', 'FAN12G1700' => 'fan', 'FAN12G2028' => 'fan', 'FAN15G1160' => 'fan', 'FAN15G3063' => 'fan', 'FAN16G2540' => 'fan', 'FAN16G3077' => 'fan', 'FAN16G3624' => 'fan', 'FAN17G0221' => 'fan', 'FAN20G2492' => 'fan', 'FAN20G2905' => 'fan', 'FAN21G0548' => 'fan', 'FAN21G1300' => 'fan', 'FAN22G0077' => 'fan', 'FAN22G1315' => 'fan', 'FAN24G1280' => 'fan', 'FAN24G1445' => 'fan', 'FAN24G3527' => 'fan', 'FAN25G0464' => 'fan', 'FAN25G2885' => 'fan', 'FAN25G3270' => 'fan', 'FAN27G1101' => 'fan', 'FAN27G2846' => 'fan', 'FAN27G3524' => 'fan', 'FvH4_2g11770' => 'fve', 'FvH4_2g15630' => 'fve', 'FvH4_3g05570' => 'fve', 'FvH4_3g09110' => 'fve', 'FvH4_3g19940' => 'fve', 'FvH4_4g04821' => 'fve', 'FvH4_4g31480' => 'fve', 'FvH4_7g01740' => 'fve', 'Glyma.05G130400' => 'gma', 'Glyma.05G156400' => 'gma', 'Glyma.07G197000' => 'gma', 'Glyma.08G085151' => 'gma', 'Glyma.08G114500' => 'gma', 'Glyma.08G300400' => 'gma', 'Glyma.10G215800' => 'gma', 'Glyma.12G224400' => 'gma', 'Glyma.13G179300' => 'gma', 'Glyma.13G218151' => 'gma', 'Glyma.13G238800' => 'gma', 'Glyma.13G276900' => 'gma', 'Glyma.14G078200' => 'gma', 'Glyma.15G074500' => 'gma', 'Glyma.15G094100' => 'gma', 'Glyma.17G247200' => 'gma', 'Glyma.18G120100' => 'gma', 'Glyma.20G176000' => 'gma', 'Gohir.A01G063600' => 'ghi', 'Gohir.A01G170301' => 'ghi', 'Gohir.A02G060500' => 'ghi', 'Gohir.A05G133850' => 'ghi', 'Gohir.A05G161400' => 'ghi', 'Gohir.A06G012900' => 'ghi', 'Gohir.A06G035901' => 'ghi', 'Gohir.A06G127100' => 'ghi', 'Gohir.A06G210500' => 'ghi', 'Gohir.A08G008650' => 'ghi', 'Gohir.A09G072700' => 'ghi', 'Gohir.A09G088301' => 'ghi', 'Gohir.A10G040600' => 'ghi', 'Gohir.A12G036300' => 'ghi', 'Gohir.A12G143350' => 'ghi', 'Gohir.A12G165500' => 'ghi', 'Gohir.A13G145700' => 'ghi', 'Gohir.D01G050000' => 'ghi', 'Gohir.D01G051366' => 'ghi', 'Gohir.D01G161350' => 'ghi', 'Gohir.D02G065900' => 'ghi', 'Gohir.D05G164200' => 'ghi', 'Gohir.D05G355500' => 'ghi', 'Gohir.D06G010400' => 'ghi', 'Gohir.D06G111250' => 'ghi', 'Gohir.D06G132000' => 'ghi', 'Gohir.D06G210500' => 'ghi', 'Gohir.D07G165675' => 'ghi', 'Gohir.D08G062240' => 'ghi', 'Gohir.D08G086101' => 'ghi', 'Gohir.D08G138060' => 'ghi', 'Gohir.D09G072300' => 'ghi', 'Gohir.D10G041400' => 'ghi', 'Gohir.D11G191020' => 'ghi', 'Gohir.D11G212066' => 'ghi', 'Gohir.D12G036300' => 'ghi', 'Gohir.D12G168600' => 'ghi', 'Gohir.D13G150600' => 'ghi', 'Gorai.001G057300' => 'gra', 'Gorai.002G069900' => 'gra', 'Gorai.002G200000' => 'gra', 'Gorai.003G067600' => 'gra', 'Gorai.005G074800' => 'gra', 'Gorai.006G087300' => 'gra', 'Gorai.008G037500' => 'gra', 'Gorai.008G181400' => 'gra', 'Gorai.009G169400' => 'gra', 'Gorai.009G387900' => 'gra', 'Gorai.010G013300' => 'gra', 'Gorai.010G153800' => 'gra', 'Gorai.010G255800' => 'gra', 'Gorai.011G043700' => 'gra', 'Gorai.011G198900' => 'gra', 'Gorai.013G168400' => 'gra', 'GSVIVG01005212001' => 'vvi', 'GSVIVG01006163001' => 'vvi', 'GSVIVG01009625001' => 'vvi', 'GSVIVG01014338001' => 'vvi', 'GSVIVG01020005001' => 'vvi', 'GSVIVG01021450001' => 'vvi', 'GSVIVG01023975001' => 'vvi', 'GSVIVG01034490001' => 'vvi', 'HanXRQChr04g0112071' => 'han', 'HanXRQChr05g0131151' => 'han', 'HanXRQChr09g0262371' => 'han', 'HanXRQChr09g0268401' => 'han', 'HanXRQChr10g0279241' => 'han', 'HanXRQChr10g0297961' => 'han', 'HanXRQChr11g0326231' => 'han', 'HanXRQChr11g0328471' => 'han', 'HanXRQChr16g0507941' => 'han', 'HanXRQChr17g0560211' => 'han', 'Haze_02108' => 'cav', 'Haze_02428' => 'cav', 'Haze_05593' => 'cav', 'Haze_06448' => 'cav', 'Haze_09427' => 'cav', 'Haze_12022' => 'cav', 'Haze_17612' => 'cav', 'Haze_17928' => 'cav', 'Hma1.2p1_0032F.1_g019250' => 'hma', 'Hma1.2p1_0163F.1_g072690' => 'hma', 'Hma1.2p1_0265F.1_g106710' => 'hma', 'Hma1.2p1_0286F.1_g113970' => 'hma', 'Hma1.2p1_0363F.1_g136640' => 'hma', 'Hma1.2p1_0584F.1_g183470' => 'hma', 'Hma1.2p1_0885F.1_g232570' => 'hma', 'HPP92_006022' => 'vpl', 'HPP92_007320' => 'vpl', 'HPP92_011521' => 'vpl', 'HPP92_019387' => 'vpl', 'HPP92_024038' => 'vpl', 'Hund05891' => 'sun', 'Hund06450' => 'sun', 'Hund12053' => 'sun', 'Hund16800' => 'sun', 'Hund21222' => 'sun', 'Hund22896' => 'sun', 'Hund23746' => 'sun', 'Hund27083' => 'sun', 'Lalb_Chr02g0141831' => 'lal', 'Lalb_Chr02g0141841' => 'lal', 'Lalb_Chr05g0220411' => 'lal', 'Lalb_Chr06g0162081' => 'lal', 'Lalb_Chr09g0327651' => 'lal', 'Lalb_Chr13g0295051' => 'lal', 'Lalb_Chr15g0086801' => 'lal', 'Lalb_Chr16g0383781' => 'lal', 'Lalb_Chr16g0383791' => 'lal', 'Lalb_Chr18g0055441' => 'lal', 'Lalb_Chr18g0059611' => 'lal', 'Lalb_Chr20g0109661' => 'lal', 'Lalb_Chr20g0109831' => 'lal', 'Lalb_Chr20g0121871' => 'lal', 'Lalb_Chr22g0355361' => 'lal', 'Lalb_Chr25g0286371' => 'lal', 'Lj1A1187G43' => 'lonja', 'Lj1A1205T50' => 'lonja', 'Lj1A800G33' => 'lonja', 'Lj1C1187T7' => 'lonja', 'Lj1C843T11' => 'lonja', 'Lj1g0010940' => 'lja', 'Lj2A288T69' => 'lonja', 'Lj3g0024276' => 'lja', 'Lj4A47T76' => 'lonja', 'Lj4g0005805' => 'lja', 'Lj4g0006097' => 'lja', 'Lj4g0008528' => 'lja', 'Lj4g0024907' => 'lja', 'Lj5g0012472' => 'lja', 'Lj5g0018648' => 'lja', 'Lj6C789G1' => 'lonja', 'Lj6g0004000' => 'lja', 'Lj7A292G67' => 'lonja', 'Lj7A292T64' => 'lonja', 'Lj9A400T58' => 'lonja', 'Lsat_1_v5_gn_1_126181' => 'lsa', 'Lsat_1_v5_gn_4_123041' => 'lsa', 'Lsat_1_v5_gn_4_133620' => 'lsa', 'Lsat_1_v5_gn_4_53221' => 'lsa', 'Lsat_1_v5_gn_4_71961' => 'lsa', 'Lsat_1_v5_gn_7_105241' => 'lsa', 'Lsat_1_v5_gn_7_21361' => 'lsa', 'Lsat_1_v5_gn_7_28860' => 'lsa', 'Lsat_1_v5_gn_7_31260' => 'lsa', 'Lsat_1_v5_gn_8_52801' => 'lsa', 'Manes.02G191400' => 'mes', 'Manes.03G110100' => 'mes', 'Manes.04G071100' => 'mes', 'Manes.05G100500' => 'mes', 'Manes.05G164700' => 'mes', 'Manes.15G087000' => 'mes', 'Manes.15G121500' => 'mes', 'Manes.16G028300' => 'mes', 'Manes.17G046100' => 'mes', 'Manes.17G069800' => 'mes', 'Manes.18G100500' => 'mes', 'Mapoly0002s0109' => 'mpo', 'Mapoly0024s0007' => 'mpo', 'Mapoly0089s0032' => 'mpo', 'MBI04_g42241_MAGBIO' => 'mbi', 'MBI05_g11988_MAGBIO' => 'mbi', 'MBI05_g35452_MAGBIO' => 'mbi', 'MBI07_g30179_MAGBIO' => 'mbi', 'MBI07_g35859_MAGBIO' => 'mbi', 'MBI07_g35860_MAGBIO' => 'mbi', 'MBI07_g37166_MAGBIO' => 'mbi', 'MBI08_g18172_MAGBIO' => 'mbi', 'MBI09_g08441_MAGBIO' => 'mbi', 'MBI13_g01676_MAGBIO' => 'mbi', 'MBI14_g42955_MAGBIO' => 'mbi', 'MBI16_g13161_MAGBIO' => 'mbi', 'MBI17_g27204_MAGBIO' => 'mbi', 'MBI19_g21595_MAGBIO' => 'mbi', 'MD00G1148400' => 'mdo', 'MD02G1301200' => 'mdo', 'MD03G1227800' => 'mdo', 'MD05G1041100' => 'mdo', 'MD05G1124800' => 'mdo', 'MD05G1284000' => 'mdo', 'MD05G1338800' => 'mdo', 'MD05G1338900' => 'mdo', 'MD07G1022800' => 'mdo', 'MD10G1047500' => 'mdo', 'MD10G1127500' => 'mdo', 'MD10G1262300' => 'mdo', 'MD10G1293800' => 'mdo', 'MD16G1074300' => 'mdo', 'Medtr1g021670' => 'mtr', 'Medtr1g096320' => 'mtr', 'Medtr2g013690' => 'mtr', 'Medtr2g019450' => 'mtr', 'Medtr2g085170' => 'mtr', 'Medtr4g088785' => 'mtr', 'Medtr8g055930' => 'mtr', 'Medtr8g085850' => 'mtr', 'MELO3C002605.2' => 'cme', 'MELO3C003891.2' => 'cme', 'MELO3C004012.2' => 'cme', 'MELO3C007134.2' => 'cme', 'MELO3C008118.2' => 'cme', 'MELO3C016700.2' => 'cme', 'MELO3C024127.2' => 'cme', 'MELO3C033361.2' => 'cme', 'MELO3C033362.2' => 'cme', 'Migut.C00430' => 'egut', 'Migut.C01246' => 'egut', 'Migut.E00101' => 'egut', 'Migut.H01486' => 'egut', 'Migut.H01939' => 'egut', 'Migut.K00360' => 'egut', 'Migut.M00910' => 'egut', 'Migut.M01139' => 'egut', 'Migut.N02677' => 'egut', 'MSTRG.13252' => 'ama', 'MSTRG.14701' => 'ama', 'MSTRG.1521' => 'ama', 'MSTRG.15884' => 'ama', 'MSTRG.16242' => 'ama', 'MSTRG.22285' => 'ama', 'MSTRG.22444' => 'ama', 'MSTRG.2349' => 'ama', 'MSTRG.26308' => 'ama', 'MSTRG.28296' => 'ama', 'MSTRG.9895' => 'ama', 'Nitab4.5_0000110g0060' => 'nta', 'Nitab4.5_0000420g0130' => 'nta', 'Nitab4.5_0000422g0030' => 'nta', 'Nitab4.5_0000560g0180' => 'nta', 'Nitab4.5_0000703g0100' => 'nta', 'Nitab4.5_0000786g0200' => 'nta', 'Nitab4.5_0001336g0020' => 'nta', 'Nitab4.5_0001796g0030' => 'nta', 'Nitab4.5_0003348g0060' => 'nta', 'Nitab4.5_0003698g0040' => 'nta', 'Nitab4.5_0003942g0090' => 'nta', 'Nitab4.5_0004775g0070' => 'nta', 'Nitab4.5_0004864g0030' => 'nta', 'Nitab4.5_0005615g0020' => 'nta', 'Nitab4.5_0009288g0030' => 'nta', 'Nitab4.5_0009341g0010' => 'nta', 'Nitab4.5_0009535g0010' => 'nta', 'Nn1g03995' => 'nnu', 'Nn1g04100' => 'nnu', 'Nn1g06530' => 'nnu', 'Nn3g16404' => 'nnu', 'Nn3g17212' => 'nnu', 'Nn3g20776' => 'nnu', 'Nn3g21923' => 'nnu', 'Nn5g27737' => 'nnu', 'Nn5g29461' => 'nnu', 'Nn7g38355' => 'nnu', 'Nn8g39873' => 'nnu', 'Oeu000548.2' => 'oeu', 'Oeu004672.1' => 'oeu', 'Oeu015605.2' => 'oeu', 'Oeu016092.1' => 'oeu', 'Oeu017879.3' => 'oeu', 'Oeu024910.1' => 'oeu', 'Oeu028965.1' => 'oeu', 'Oeu031269.1' => 'oeu', 'Oeu031270.1' => 'oeu', 'Oeu032535.1' => 'oeu', 'Oeu034151.1' => 'oeu', 'Oeu034152.1' => 'oeu', 'Oeu034588.2' => 'oeu', 'Oeu050846.1' => 'oeu', 'Oeu050849.2' => 'oeu', 'Oeu051063.2' => 'oeu', 'Oeu052368.1' => 'oeu', 'Oeu052370.1' => 'oeu', 'Os01g0210400' => 'osa', 'Os01g0304300' => 'osa', 'Os01g0749100' => 'osa', 'Os02g0745800' => 'osa', 'Os03g0769050' => 'osa', 'Os05g0531500' => 'osa', 'Os06g0724300' => 'osa', 'Os11g0198100' => 'osa', 'Peaxi162Scf00069g01425' => 'pax', 'Peaxi162Scf00280g00811' => 'pax', 'Peaxi162Scf00310g00615' => 'pax', 'Peaxi162Scf00362g00542' => 'pax', 'Peaxi162Scf00461g00310' => 'pax', 'Peaxi162Scf00530g00118' => 'pax', 'Peaxi162Scf00541g00057' => 'pax', 'Peaxi162Scf00661g00017' => 'pax', 'Peaxi162Scf00926g00027' => 'pax', 'Peaxi162Scf01064g00263' => 'pax', 'Peaxi162Scf01211g00135' => 'pax', 'PGR004G2336' => 'pgr', 'PGR042G0327' => 'pgr', 'PGR042G1957' => 'pgr', 'PGR042G2003' => 'pgr', 'PGR042G3929' => 'pgr', 'PGR083G1137' => 'pgr', 'PGR083G1364' => 'pgr', 'PGSC0003DMG400003381' => 'stu', 'PGSC0003DMG400003417' => 'stu', 'PGSC0003DMG400008981' => 'stu', 'PGSC0003DMG400012417' => 'stu', 'PGSC0003DMG400012823' => 'stu', 'PGSC0003DMG400016885' => 'stu', 'PGSC0003DMG400022812' => 'stu', 'PGSC0003DMG400029726' => 'stu', 'PGSC0003DMG401009243' => 'stu', 'PGSC0003DMG401031505' => 'stu', 'PGSC0003DMG402031505' => 'stu', 'Phvul.001G017600' => 'pvu', 'Phvul.002G193500' => 'pvu', 'Phvul.002G228900' => 'pvu', 'Phvul.002G236800' => 'pvu', 'Phvul.003G049500' => 'pvu', 'Phvul.005G072000' => 'pvu', 'Phvul.006G164800' => 'pvu', 'Phvul.006G185100' => 'pvu', 'Phvul.007G090000' => 'pvu', 'Potri.001G399800' => 'ptr', 'Potri.002G149900' => 'ptr', 'Potri.004G044100' => 'ptr', 'Potri.004G177600' => 'ptr', 'Potri.009G138000' => 'ptr', 'Potri.010G094000' => 'ptr', 'Potri.011G053000' => 'ptr', 'Potri.011G119300' => 'ptr', 'Potri.013G113700' => 'ptr', 'Potri.018G107800' => 'ptr', 'Potri.019G084100' => 'ptr', 'Pp3c14_23720' => 'ppa', 'Pp3c16_6340' => 'ppa', 'Pp3c23_13420' => 'ppa', 'Pp3c24_2740' => 'ppa', 'Pp3c25_860' => 'ppa', 'Pp3c8_21750' => 'ppa', 'Prupe.1G273000' => 'ppe', 'Prupe.1G273700' => 'ppe', 'Prupe.1G274100' => 'ppe', 'Prupe.2G023300' => 'ppe', 'Prupe.4G048000' => 'ppe', 'Prupe.4G080400' => 'ppe', 'Prupe.4G181200' => 'ppe', 'Prupe.8G056900' => 'ppe', 'Prupe.8G168700' => 'ppe', 'Psat1g189080' => 'psa', 'Psat1g204760' => 'psa', 'Psat4g175560' => 'psa', 'Psat4g177720' => 'psa', 'Psat5g244240' => 'psa', 'Psat6g010720' => 'psa', 'Psat6g187200' => 'psa', 'Psat7g072040' => 'psa', 'PSO017G3501' => 'pso', 'PSO063G2148' => 'pso', 'PSO063G5608' => 'pso', 'PSO210G6392' => 'pso', 'PSO541G2319' => 'pso', 'PSO541G2836' => 'pso', 'PSO541G4012' => 'pso', 'PSO541G6253' => 'pso', 'PSO675G0580' => 'pso', 'PSO675G0856' => 'pso', 'PSO675G5635' => 'pso', 'PSO675G9157' => 'pso', 'PSO832G1660' => 'pso', 'PSO832G1969' => 'pso', 'QL02p007186' => 'qlo', 'QL02p033904' => 'qlo', 'QL03p064391' => 'qlo', 'QL05p040593' => 'qlo', 'QL05p058242' => 'qlo', 'QL08p021825' => 'qlo', 'QL11p004981' => 'qlo', 'RcHm_v2.0_Chr1g0318301' => 'rch', 'RcHm_v2.0_Chr4g0418501' => 'rch', 'RcHm_v2.0_Chr4g0439971' => 'rch', 'RcHm_v2.0_Chr5g0008541' => 'rch', 'RcHm_v2.0_Chr5g0014101' => 'rch', 'RcHm_v2.0_Chr5g0014131' => 'rch', 'RcHm_v2.0_Chr5g0033621' => 'rch', 'RcHm_v2.0_Chr6g0272041' => 'rch', 'RcHm_v2.0_Chr6g0278831' => 'rch', 'Rhsim02G0130400' => 'rsi', 'Rhsim02G0171100' => 'rsi', 'Rhsim05G0053000' => 'rsi', 'Rhsim05G0053100' => 'rsi', 'Rhsim06G0096500' => 'rsi', 'Rhsim06G0096600' => 'rsi', 'Rhsim06G0199100' => 'rsi', 'Rhsim12G0062300' => 'rsi', 'Rhsim12G0062800' => 'rsi', 'Sabra02G0118600' => 'sbr', 'Sabra04G0027300' => 'sbr', 'Sabra04G0119500' => 'sbr', 'Sabra08G0112500' => 'sbr', 'Sabra11G0036800' => 'sbr', 'Sabra11G0103800' => 'sbr', 'Sabra13G0096300' => 'sbr', 'Sabra16G0262300' => 'sbr', 'Sabra18G0091700' => 'sbr', 'Sabra19G0095400' => 'sbr', 'SalBow6G3080' => 'sbo', 'SalBow7G1157' => 'sbo', 'SalBow7G2123' => 'sbo', 'SalBow7G2285' => 'sbo', 'SalBow7G3537' => 'sbo', 'SalBow8G2947' => 'sbo', 'SalBow8G4463' => 'sbo', 'SalBow8G5466' => 'sbo', 'Sc01g0001750' => 'sci', 'Sc02g0006640' => 'sci', 'Sc02g0006670' => 'sci', 'Sc04g0008220' => 'sci', 'Sc05g0006190' => 'sci', 'Sc08g0002760' => 'sci', 'Sc17g0006170' => 'sci', 'Sc22g0002050' => 'sci', 'Sc23g0001190' => 'sci', 'Sc24g0000980' => 'sci', 'Sed0006245' => 'sed', 'Sed0007543' => 'sed', 'Sed0009411' => 'sed', 'Sed0010765' => 'sed', 'Sed0012944' => 'sed', 'Sed0014682' => 'sed', 'Sed0016174' => 'sed', 'Sed0016796' => 'sed', 'Sed0020317' => 'sed', 'Sed0021467' => 'sed', 'SEGI_01316' => 'sgi', 'SEGI_03374' => 'sgi', 'SEGI_16265' => 'sgi', 'SEGI_18569' => 'sgi', 'SEGI_20351' => 'sgi', 'SEGI_26395' => 'sgi', 'SEGI_29469' => 'sgi', 'SEGI_34771' => 'sgi', 'SEGI_36769' => 'sgi', 'SEGI_37139' => 'sgi', 'SGA_v2.0_scaffold100G29687' => 'sas', 'SGA_v2.0_scaffold118G32472' => 'sas', 'SGA_v2.0_scaffold14G07051' => 'sas', 'SGA_v2.0_scaffold183G39845' => 'sas', 'SGA_v2.0_scaffold1G00174' => 'sas', 'SGA_v2.0_scaffold22G09714' => 'sas', 'SGA_v2.0_scaffold333G48992' => 'sas', 'SGA_v2.0_scaffold46G17491' => 'sas', 'SGA_v2.0_scaffold49G18294' => 'sas', 'SGA_v2.0_scaffold63G21658' => 'sas', 'SHI01741' => 'shi', 'SHI05771' => 'shi', 'SHI18077' => 'shi', 'SHI20525' => 'shi', 'SHI20527' => 'shi', 'SHI20528' => 'shi', 'SMO172G0185' => 'smo', 'SMO198G0020' => 'smo', 'SMO351G0006' => 'smo', 'SMO356G0118' => 'smo', 'SMO358G0296' => 'smo', 'SMO367G0079' => 'smo', 'SMO367G1277' => 'smo', 'Solyc01g014220.3' => 'sly', 'Solyc01g111770.2' => 'sly', 'Solyc02g078180.3' => 'sly', 'Solyc03g006430.3' => 'sly', 'Solyc03g006456.1' => 'sly', 'Solyc03g079860.2' => 'sly', 'Solyc04g079770.3' => 'sly', 'Solyc05g007430.4' => 'sly', 'Solyc07g063150.3' => 'sly', 'Solyc08g016620.3' => 'sly', 'Solyc09g057590.3' => 'sly', 'Solyc09g057600.1' => 'sly', 'Solyc10g009050.3' => 'sly', 'Solyc11g017420.2' => 'sly', 'Sopen01g053810' => 'spe', 'Sopen02g023040' => 'spe', 'Sopen03g002440' => 'spe', 'Sopen04g033350' => 'spe', 'Sopen05g003310' => 'spe', 'Sopen07g004050' => 'spe', 'Sopen07g031340' => 'spe', 'Sopen08g006990' => 'spe', 'Sopen10g004830' => 'spe', 'Sopen11g009370' => 'spe', 'Sp1g24450' => 'spa', 'Sp1g29670' => 'spa', 'Sp1g39600' => 'spa', 'Sp2g11080' => 'spa', 'Sp2g13970' => 'spa', 'Sp4g16130' => 'spa', 'Sp6g13080' => 'spa', 'Sp7g37270' => 'spa', 'TAR371G0065' => 'tar', 'TAR376G0340' => 'tar', 'TAR376G0435' => 'tar', 'TAR381G0002' => 'tar', 'TAR381G1236' => 'tar', 'TAR624G0055' => 'tar', 'TAR624G0324' => 'tar', 'TAR624G0696' => 'tar', 'TAR624G0906' => 'tar', 'TAR625G0107' => 'tar', 'TAR626G0015' => 'tar', 'TAR626G1356' => 'tar', 'TAR627G0888' => 'tar', 'TAR628G0399' => 'tar', 'TAR628G1327' => 'tar', 'TAR629G2831' => 'tar', 'TAR629G2874' => 'tar', 'TAR633G1432' => 'tar', 'TAR633G2771' => 'tar', 'THA.LOC104803394' => 'tha', 'THA.LOC104805153' => 'tha', 'THA.LOC104806784' => 'tha', 'THA.LOC104810473' => 'tha', 'THA.LOC104813100' => 'tha', 'THA.LOC104814215' => 'tha', 'THA.LOC104815554' => 'tha', 'THA.LOC104820544' => 'tha', 'THA.LOC104824754' => 'tha', 'THA.LOC104827717' => 'tha', 'Thecc.02G031400' => 'tca', 'Thecc.02G055900' => 'tca', 'Thecc.02G350800' => 'tca', 'Thecc.06G150900' => 'tca', 'Thecc.06G186600' => 'tca', 'Thecc.07G089600' => 'tca', 'Thecc.08G020400' => 'tca', 'Thecc.08G182100' => 'tca', 'Thhalv10000873m.g' => 'esa', 'Thhalv10004185m.g' => 'esa', 'Thhalv10006981m.g' => 'esa', 'Thhalv10007204m.g' => 'esa', 'Thhalv10011374m.g' => 'esa', 'Thhalv10013482m.g' => 'esa', 'Thhalv10017801m.g' => 'esa', 'Thhalv10024983m.g' => 'esa', 'TPR.G12072' => 'tpr', 'TPR.G15769' => 'tpr', 'TPR.G16504' => 'tpr', 'TPR.G16506' => 'tpr', 'TPR.G24345' => 'tpr', 'TPR.G26666' => 'tpr', 'TPR.G27320' => 'tpr', 'TPR.G31819' => 'tpr', 'TPR.G38879' => 'tpr', 'TPR.G39015' => 'tpr', 'TPR.G8819' => 'tpr', 'TWI09G0924' => 'twi', 'TWI12G0811' => 'twi', 'TWI12G1294' => 'twi', 'TWI31G0150' => 'twi', 'TWI36G1262' => 'twi', 'TWI38G1287' => 'twi', 'TWI38G1633' => 'twi', 'TWI38G1982' => 'twi', 'TWI39G0116' => 'twi', 'TWI60G1011' => 'twi', 'TWI63G0171' => 'twi', 'TWI73G0839' => 'twi', 'TWI79G1511' => 'twi', 'unitig_0.g915' => 'ugi', 'unitig_0.g916' => 'ugi', 'unitig_21.g20219' => 'ugi', 'unitig_21.g20416' => 'ugi', 'unitig_578.g16132' => 'ugi', 'unitig_578.g16718' => 'ugi', 'unitig_62.g23481' => 'ugi', 'unitig_744.g24535' => 'ugi', 'unitig_749.g13525' => 'ugi', 'vmacro01248' => 'vma', 'vmacro02290' => 'vma', 'vmacro10946' => 'vma', 'vmacro11865' => 'vma', 'vmacro12493' => 'vma', 'vmacro17322' => 'vma', 'vmacro21599' => 'vma', 'vmacro23041' => 'vma', 'VMungo0251G0004' => 'vmu', 'VMungo0251G2639' => 'vmu', 'VMungo0251G2967' => 'vmu', 'VMungo0540G0864' => 'vmu', 'VMungo0540G1569' => 'vmu', 'VMungo0647G0317' => 'vmu', 'VMungo0720G1373' => 'vmu', 'VMungo0720G1508' => 'vmu', 'VMungo1080G0485' => 'vmu', 'VMungo1215G3177' => 'vmu', 'Zm00001eb112600' => 'zma', 'Zm00001eb120220' => 'zma', 'Zm00001eb153240' => 'zma', 'Zm00001eb168880' => 'zma', 'Zm00001eb213920' => 'zma', 'Zm00001eb228280' => 'zma', 'Zm00001eb254580' => 'zma', 'Zm00001eb272180' => 'zma', 'Zm00001eb293190' => 'zma', 'Zm00001eb322930' => 'zma', 'Zm00001eb353360' => 'zma', 'Zm00001eb353390' => 'zma', 'Zm00001eb353430' => 'zma', 'Zm00001eb353440' => 'zma', 'Zm00001eb353780' => 'zma' ), 'gf_id' => 'HOM05D000499', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000499' ), 'data_identifier' => 'HOM05D000499', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000499', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1066', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p29780' => 'bna', 'A02p33180' => 'bna', 'A03p16470' => 'bna', 'A03p66010' => 'bna', 'A04p25970' => 'bna', 'A06p01270' => 'bna', 'A06p46080' => 'bna', 'A07p11400' => 'bna', 'A08p01840' => 'bna', 'A08p08230' => 'bna', 'A08p25740' => 'bna', 'A09p32070' => 'bna', 'A09p37830' => 'bna', 'A09p42840' => 'bna', 'A09p42850' => 'bna', 'Aa31LG10G2060' => 'aar', 'Aa31LG2G7410' => 'aar', 'Aa31LG6G10200' => 'aar', 'Aa31LG6G16680' => 'aar', 'Aa31LG6G8470' => 'aar', 'Aa31LG9G12730' => 'aar', 'Aa31LG9G13680' => 'aar', 'Aa31LG9G14920' => 'aar', 'Aa31LG9G6650' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4977' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5467' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3254' => 'aag', 'Actinidia02578' => 'ach', 'Actinidia07693' => 'ach', 'Actinidia08413' => 'ach', 'Actinidia08414' => 'ach', 'Actinidia15289' => 'ach', 'Actinidia19871' => 'ach', 'Actinidia21475' => 'ach', 'Actinidia22576' => 'ach', 'Actinidia28327' => 'ach', 'Actinidia32491' => 'ach', 'Actinidia39463' => 'ach', 'Actinidia39571' => 'ach', 'Ah.01g013750' => 'amhyb', 'Ah.01g023210' => 'amhyb', 'Ah.04g164850' => 'amhyb', 'Ah.05g178060' => 'amhyb', 'Ah.07g204270' => 'amhyb', 'Ah.07g208480' => 'amhyb', 'Ah.09g237410' => 'amhyb', 'Ah.14g089460' => 'amhyb', 'AL1G41790' => 'aly', 'AL1G49050' => 'aly', 'AL1G53810' => 'aly', 'AL1G61400' => 'aly', 'AL4G18580' => 'aly', 'AL5G12510' => 'aly', 'AL5G12540' => 'aly', 'AL6G43230' => 'aly', 'AL7G10370' => 'aly', 'AL7G19250' => 'aly', 'AL8G12240' => 'aly', 'AL8G18540' => 'aly', 'Aqoxy1G02409' => 'aox', 'Aqoxy2G03993' => 'aox', 'Aqoxy3G03357' => 'aox', 'Aqoxy4G00785' => 'aox', 'Aqoxy5G02598' => 'aox', 'Aqoxy6G00132' => 'aox', 'Aqoxy7G01776' => 'aox', 'Aqoxy7G02316' => 'aox', 'Aqoxy7G03973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.12AFKW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B8730' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27IQR1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3F75VG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3RE0GA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41TCQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.527VTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FIR39' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5W8UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DA38EV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ63HS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H1I32C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HC27T5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4M8AP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7N3CZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9UVDZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LS1NQA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT1D4B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SKC4TM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCFV76' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF9Q1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQWD9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1ZM88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WE07RT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YCK7VH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJE6Q6' => 'arhy', 'AT1G28240' => 'ath', 'AT1G34550' => 'ath', 'AT1G53040' => 'ath', 'AT2G02910' => 'ath', 'AT4G09630' => 'ath', 'AT4G38500' => 'ath', 'AT5G42660' => 'ath', 'AT5G46220' => 'ath', 'ATR0152G026' => 'atr', 'ATR0564G343' => 'atr', 'ATR0706G151' => 'atr', 'ATR0733G207' => 'atr', 'ATR0751G234' => 'atr', 'ATR0807G048' => 'atr', 'ATR1091G084' => 'atr', 'Atru.chr10.1229' => 'acertr', 'Atru.chr10.1230' => 'acertr', 'Atru.chr10.1874' => 'acertr', 'Atru.chr11.1808' => 'acertr', 'Atru.chr13.1795' => 'acertr', 'Atru.chr13.570' => 'acertr', 'Atru.chr2.2608' => 'acertr', 'Atru.chr2.2609' => 'acertr', 'Atru.chr5.3428' => 'acertr', 'Atru.chr8.1171' => 'acertr', 'AUR62004651' => 'cqu', 'AUR62008675' => 'cqu', 'AUR62010014' => 'cqu', 'AUR62013004' => 'cqu', 'AUR62014825' => 'cqu', 'AUR62015015' => 'cqu', 'AUR62015151' => 'cqu', 'AUR62017020' => 'cqu', 'AUR62019422' => 'cqu', 'AUR62023570' => 'cqu', 'AUR62025571' => 'cqu', 'AUR62029098' => 'cqu', 'AUR62033863' => 'cqu', 'AUR62034296' => 'cqu', 'AUR62040075' => 'cqu', 'BcaB02g07334' => 'bca', 'BcaB02g10575' => 'bca', 'BcaB03g12119' => 'bca', 'BcaB03g12120' => 'bca', 'BcaB03g13945' => 'bca', 'BcaB04g17123' => 'bca', 'BcaB04g17867' => 'bca', 'BcaB04g19839' => 'bca', 'BcaB07g30317' => 'bca', 'BcaB07g32432' => 'bca', 'BcaB07g33362' => 'bca', 'BcaB08g36611' => 'bca', 'BcaC01g00028' => 'bca', 'BcaC01g01356' => 'bca', 'BcaC01g02034' => 'bca', 'BcaC01g06051' => 'bca', 'BcaC03g16839' => 'bca', 'BcaC03g17176' => 'bca', 'BcaC05g26829' => 'bca', 'BcaC06g31490' => 'bca', 'BcaC06g35344' => 'bca', 'BcaC06g36570' => 'bca', 'BcaC07g37537' => 'bca', 'BcaC08g43491' => 'bca', 'BcaC08g43773' => 'bca', 'BcaNung00234' => 'bca', 'BcaNung01982' => 'bca', 'BcaNung03707' => 'bca', 'BcaNung06454' => 'bca', 'BolC2t10762H' => 'bol', 'BolC2t11191H' => 'bol', 'BolC3t14322H' => 'bol', 'BolC3t19747H' => 'bol', 'BolC3t21425H' => 'bol', 'BolC4t27800H' => 'bol', 'BolC5t31423H' => 'bol', 'BolC6t35951H' => 'bol', 'BolC6t36282H' => 'bol', 'BolC7t40678H' => 'bol', 'BolC7t40679H' => 'bol', 'BolC7t42222H' => 'bol', 'BolC7t43492H' => 'bol', 'BolC7t46785H' => 'bol', 'BolC8t47853H' => 'bol', 'BolC9t56805H' => 'bol', 'BraA02t08000Z' => 'bra', 'BraA02t08341Z' => 'bra', 'BraA03t10936Z' => 'bra', 'BraA03t15657Z' => 'bra', 'BraA04t18100Z' => 'bra', 'BraA05t20523Z' => 'bra', 'BraA06t23353Z' => 'bra', 'BraA06t27473Z' => 'bra', 'BraA06t27769Z' => 'bra', 'BraA07t28928Z' => 'bra', 'BraA08t32236Z' => 'bra', 'BraA08t32841Z' => 'bra', 'BraA08t34524Z' => 'bra', 'BraA09t38742Z' => 'bra', 'BraA09t39295Z' => 'bra', 'C02p47180' => 'bna', 'C02p50990' => 'bna', 'C03p19360' => 'bna', 'C03p74950' => 'bna', 'C03p91000' => 'bna', 'C04p63260' => 'bna', 'C05p27050' => 'bna', 'C06p08750' => 'bna', 'C06p11490' => 'bna', 'C07p02820' => 'bna', 'C07p17180' => 'bna', 'C07p29440' => 'bna', 'C07p63730' => 'bna', 'C09p39260' => 'bna', 'CAN.G1164.34' => 'can', 'CAN.G1164.39' => 'can', 'CAN.G1530.3' => 'can', 'CAN.G162.61' => 'can', 'CAN.G176.6' => 'can', 'CAN.G289.49' => 'can', 'CAN.G370.21' => 'can', 'CAN.G370.22' => 'can', 'CAN.G371.117' => 'can', 'CAN.G58.37' => 'can', 'CAN.G588.98' => 'can', 'CANSAT21G2266' => 'cansat', 'CANSAT25G2799' => 'cansat', 'CANSAT35G0862' => 'cansat', 'CANSAT35G1704' => 'cansat', 'CANSAT35G1760' => 'cansat', 'CANSAT56G3971' => 'cansat', 'CANSAT56G4116' => 'cansat', 'CANSAT80G1259' => 'cansat', 'CARHR027730' => 'chi', 'CARHR033880' => 'chi', 'CARHR043270' => 'chi', 'CARHR145330' => 'chi', 'CARHR145340' => 'chi', 'CARHR175570' => 'chi', 'CARHR181570' => 'chi', 'CARHR258470' => 'chi', 'CARHR260490' => 'chi', 'CARHR294220' => 'chi', 'Carub.0001s2668' => 'cru', 'Carub.0001s3257' => 'cru', 'Carub.0001s4220' => 'cru', 'Carub.0005s0179' => 'cru', 'Carub.0006s2807' => 'cru', 'Carub.0007s0039' => 'cru', 'Carub.0008s0169' => 'cru', 'Carub.0008s0636' => 'cru', 'Ca_00338_v3' => 'car', 'Ca_00542_v3' => 'car', 'Ca_01844_v3' => 'car', 'Ca_10611_v3' => 'car', 'Ca_13326_v3' => 'car', 'Ca_17944_v3' => 'car', 'Ca_18546_v3' => 'car', 'Ca_24219_v3' => 'car', 'Ca_29972_v3' => 'car', 'CBR_g3681' => 'cbr', 'CBR_g40021' => 'cbr', 'Cc01_g08140' => 'ccan', 'Cc02_g13410' => 'ccan', 'Cc02_g37480' => 'ccan', 'Cc05_g12030' => 'ccan', 'Cc09_g03370' => 'ccan', 'Cc09_g10300' => 'ccan', 'Cc10_g03530' => 'ccan', 'Cc10_g11380' => 'ccan', 'CDE01G0176' => 'cde', 'CDE02G0675' => 'cde', 'CDE02G0942' => 'cde', 'CDE02G1153' => 'cde', 'CDE02G4177' => 'cde', 'CDE04G2117' => 'cde', 'CDE04G2736' => 'cde', 'CDE08G1161' => 'cde', 'CDE09G1238' => 'cde', 'Cfa000467' => 'cfa', 'Cfa000947' => 'cfa', 'Cfa004969' => 'cfa', 'Cfa005284' => 'cfa', 'Cfa008993' => 'cfa', 'Cfa018187' => 'cfa', 'Cfa018454' => 'cfa', 'Cfa020585' => 'cfa', 'Ciclev10000424m.g' => 'ccl', 'Ciclev10003605m.g' => 'ccl', 'Ciclev10007828m.g' => 'ccl', 'Ciclev10014620m.g' => 'ccl', 'Ciclev10015169m.g' => 'ccl', 'Ciclev10018291m.g' => 'ccl', 'Ciclev10028256m.g' => 'ccl', 'Ciclev10033822m.g' => 'ccl', 'CiPaw.05G060300' => 'cil', 'CiPaw.05G085000' => 'cil', 'CiPaw.06G083700' => 'cil', 'CiPaw.06G120300' => 'cil', 'CiPaw.09G060500' => 'cil', 'CiPaw.09G123800' => 'cil', 'CiPaw.11G169700' => 'cil', 'CiPaw.12G118300' => 'cil', 'CiPaw.15G071000' => 'cil', 'CiPaw.15G081900' => 'cil', 'ClCG01G024610' => 'cla', 'ClCG03G006070' => 'cla', 'ClCG05G019250' => 'cla', 'ClCG09G009500' => 'cla', 'ClCG11G008200' => 'cla', 'ClCG11G018080' => 'cla', 'COL.COLO4_17373' => 'col', 'COL.COLO4_22994' => 'col', 'COL.COLO4_26389' => 'col', 'COL.COLO4_27170' => 'col', 'COL.COLO4_31074' => 'col', 'COL.COLO4_31465' => 'col', 'COL.COLO4_36438' => 'col', 'COL.COLO4_36439' => 'col', 'Cpa.g.c38781' => 'cpa', 'Cpa.g.sc128.12' => 'cpa', 'Cpa.g.sc166.7' => 'cpa', 'Cpa.g.sc166.8' => 'cpa', 'Cpa.g.sc20.111' => 'cpa', 'Cpa.g.sc27.31' => 'cpa', 'Cpa.g.sc64.36' => 'cpa', 'Cpa.g.sc64.37' => 'cpa', 'Cpa.g.sc66.49' => 'cpa', 'Cpa.g.sc80.64' => 'cpa', 'CsaV3_1G012320' => 'csa', 'CsaV3_2G008480' => 'csa', 'CsaV3_2G033450' => 'csa', 'CsaV3_3G044830' => 'csa', 'CsaV3_4G033710' => 'csa', 'CsaV3_6G051730' => 'csa', 'CsaV3_7G025350' => 'csa', 'CSS0001067' => 'camsi', 'CSS0005996' => 'camsi', 'CSS0006590' => 'camsi', 'CSS0009673' => 'camsi', 'CSS0010201' => 'camsi', 'CSS0010549' => 'camsi', 'CSS0011364' => 'camsi', 'CSS0014473' => 'camsi', 'CSS0014961' => 'camsi', 'CSS0020191' => 'camsi', 'CSS0021165' => 'camsi', 'CSS0022306' => 'camsi', 'CSS0030591' => 'camsi', 'CSS0030696' => 'camsi', 'CSS0032653' => 'camsi', 'CSS0037487' => 'camsi', 'CSS0041102' => 'camsi', 'CSS0041261' => 'camsi', 'CSS0046246' => 'camsi', 'CSS0049256' => 'camsi', 'DCAR_004075' => 'dca', 'DCAR_011538' => 'dca', 'DCAR_019553' => 'dca', 'DCAR_020952' => 'dca', 'DCAR_021739' => 'dca', 'DCAR_027407' => 'dca', 'DCAR_027913' => 'dca', 'DCAR_028066' => 'dca', 'Dinv05899' => 'din', 'Dinv07563' => 'din', 'Dinv08010' => 'din', 'Dinv14125' => 'din', 'Dinv20172' => 'din', 'Dinv30743' => 'din', 'Dinv31229' => 'din', 'Dinv34162' => 'din', 'Dinv36028' => 'din', 'Dinv39368' => 'din', 'Dinv40565' => 'din', 'Dinv41706' => 'din', 'Duzib052G0089' => 'dzi', 'Duzib116G0641' => 'dzi', 'Duzib132G0069' => 'dzi', 'Duzib132G1219' => 'dzi', 'Duzib147G0278' => 'dzi', 'Duzib160G0480' => 'dzi', 'Duzib170G0661' => 'dzi', 'Duzib177G0591' => 'dzi', 'Duzib187G1353' => 'dzi', 'Duzib192G0858' => 'dzi', 'Duzib192G0883' => 'dzi', 'Duzib213G0506' => 'dzi', 'Duzib235G0289' => 'dzi', 'Duzib251G0422' => 'dzi', 'ECA232G3898' => 'eca', 'ECA233G5950' => 'eca', 'ECA234G1699' => 'eca', 'ECA234G2421' => 'eca', 'ECA236G0426' => 'eca', 'ECA236G4331' => 'eca', 'ECA248G2573' => 'eca', 'EL10Ac1g00077' => 'bvu', 'EL10Ac1g01746' => 'bvu', 'EL10Ac2g03464' => 'bvu', 'EL10Ac4g08176' => 'bvu', 'EL10Ac7g17521' => 'bvu', 'EL10Ac8g20386' => 'bvu', 'EL10Ac9g21343' => 'bvu', 'EL10Ac9g22688' => 'bvu', 'Eucgr.B03434' => 'egr', 'Eucgr.D00618' => 'egr', 'Eucgr.E02395' => 'egr', 'Eucgr.F01129' => 'egr', 'Eucgr.F02622' => 'egr', 'Eucgr.F04207' => 'egr', 'FAN01G0570' => 'fan', 'FAN03G3351' => 'fan', 'FAN06G3702' => 'fan', 'FAN07G2149' => 'fan', 'FAN10G3758' => 'fan', 'FAN11G1170' => 'fan', 'FAN11G2050' => 'fan', 'FAN11G2724' => 'fan', 'FAN12G1700' => 'fan', 'FAN12G2028' => 'fan', 'FAN15G1160' => 'fan', 'FAN15G3063' => 'fan', 'FAN16G2540' => 'fan', 'FAN16G3077' => 'fan', 'FAN16G3624' => 'fan', 'FAN17G0221' => 'fan', 'FAN20G2492' => 'fan', 'FAN20G2905' => 'fan', 'FAN21G0548' => 'fan', 'FAN21G1300' => 'fan', 'FAN22G0077' => 'fan', 'FAN22G1315' => 'fan', 'FAN24G1280' => 'fan', 'FAN24G1445' => 'fan', 'FAN24G3527' => 'fan', 'FAN25G0464' => 'fan', 'FAN25G2885' => 'fan', 'FAN25G3270' => 'fan', 'FAN27G1101' => 'fan', 'FAN27G2846' => 'fan', 'FAN27G3524' => 'fan', 'FvH4_2g11770' => 'fve', 'FvH4_2g15630' => 'fve', 'FvH4_3g05570' => 'fve', 'FvH4_3g09110' => 'fve', 'FvH4_3g19940' => 'fve', 'FvH4_4g04821' => 'fve', 'FvH4_4g31480' => 'fve', 'FvH4_7g01740' => 'fve', 'Glyma.05G130400' => 'gma', 'Glyma.05G156400' => 'gma', 'Glyma.07G197000' => 'gma', 'Glyma.08G085151' => 'gma', 'Glyma.08G114500' => 'gma', 'Glyma.08G300400' => 'gma', 'Glyma.10G215800' => 'gma', 'Glyma.12G224400' => 'gma', 'Glyma.13G179300' => 'gma', 'Glyma.13G218151' => 'gma', 'Glyma.13G238800' => 'gma', 'Glyma.13G276900' => 'gma', 'Glyma.14G078200' => 'gma', 'Glyma.15G074500' => 'gma', 'Glyma.15G094100' => 'gma', 'Glyma.17G247200' => 'gma', 'Glyma.18G120100' => 'gma', 'Glyma.20G176000' => 'gma', 'Gohir.A01G063600' => 'ghi', 'Gohir.A01G170301' => 'ghi', 'Gohir.A02G060500' => 'ghi', 'Gohir.A05G133850' => 'ghi', 'Gohir.A05G161400' => 'ghi', 'Gohir.A06G012900' => 'ghi', 'Gohir.A06G035901' => 'ghi', 'Gohir.A06G127100' => 'ghi', 'Gohir.A06G210500' => 'ghi', 'Gohir.A08G008650' => 'ghi', 'Gohir.A09G072700' => 'ghi', 'Gohir.A09G088301' => 'ghi', 'Gohir.A10G040600' => 'ghi', 'Gohir.A12G036300' => 'ghi', 'Gohir.A12G143350' => 'ghi', 'Gohir.A12G165500' => 'ghi', 'Gohir.A13G145700' => 'ghi', 'Gohir.D01G050000' => 'ghi', 'Gohir.D01G051366' => 'ghi', 'Gohir.D01G161350' => 'ghi', 'Gohir.D02G065900' => 'ghi', 'Gohir.D05G164200' => 'ghi', 'Gohir.D05G355500' => 'ghi', 'Gohir.D06G010400' => 'ghi', 'Gohir.D06G111250' => 'ghi', 'Gohir.D06G132000' => 'ghi', 'Gohir.D06G210500' => 'ghi', 'Gohir.D07G165675' => 'ghi', 'Gohir.D08G062240' => 'ghi', 'Gohir.D08G086101' => 'ghi', 'Gohir.D08G138060' => 'ghi', 'Gohir.D09G072300' => 'ghi', 'Gohir.D10G041400' => 'ghi', 'Gohir.D11G191020' => 'ghi', 'Gohir.D11G212066' => 'ghi', 'Gohir.D12G036300' => 'ghi', 'Gohir.D12G168600' => 'ghi', 'Gohir.D13G150600' => 'ghi', 'Gorai.001G057300' => 'gra', 'Gorai.002G069900' => 'gra', 'Gorai.002G200000' => 'gra', 'Gorai.003G067600' => 'gra', 'Gorai.005G074800' => 'gra', 'Gorai.006G087300' => 'gra', 'Gorai.008G037500' => 'gra', 'Gorai.008G181400' => 'gra', 'Gorai.009G169400' => 'gra', 'Gorai.009G387900' => 'gra', 'Gorai.010G013300' => 'gra', 'Gorai.010G153800' => 'gra', 'Gorai.010G255800' => 'gra', 'Gorai.011G043700' => 'gra', 'Gorai.011G198900' => 'gra', 'Gorai.013G168400' => 'gra', 'GSVIVG01005212001' => 'vvi', 'GSVIVG01006163001' => 'vvi', 'GSVIVG01009625001' => 'vvi', 'GSVIVG01014338001' => 'vvi', 'GSVIVG01020005001' => 'vvi', 'GSVIVG01021450001' => 'vvi', 'GSVIVG01023975001' => 'vvi', 'GSVIVG01034490001' => 'vvi', 'HanXRQChr04g0112071' => 'han', 'HanXRQChr05g0131151' => 'han', 'HanXRQChr09g0262371' => 'han', 'HanXRQChr09g0268401' => 'han', 'HanXRQChr10g0279241' => 'han', 'HanXRQChr10g0297961' => 'han', 'HanXRQChr11g0326231' => 'han', 'HanXRQChr11g0328471' => 'han', 'HanXRQChr16g0507941' => 'han', 'HanXRQChr17g0560211' => 'han', 'Haze_02108' => 'cav', 'Haze_02428' => 'cav', 'Haze_05593' => 'cav', 'Haze_06448' => 'cav', 'Haze_09427' => 'cav', 'Haze_12022' => 'cav', 'Haze_17612' => 'cav', 'Haze_17928' => 'cav', 'Hma1.2p1_0032F.1_g019250' => 'hma', 'Hma1.2p1_0163F.1_g072690' => 'hma', 'Hma1.2p1_0265F.1_g106710' => 'hma', 'Hma1.2p1_0286F.1_g113970' => 'hma', 'Hma1.2p1_0363F.1_g136640' => 'hma', 'Hma1.2p1_0584F.1_g183470' => 'hma', 'Hma1.2p1_0885F.1_g232570' => 'hma', 'HPP92_006022' => 'vpl', 'HPP92_007320' => 'vpl', 'HPP92_011521' => 'vpl', 'HPP92_019387' => 'vpl', 'HPP92_024038' => 'vpl', 'Hund05891' => 'sun', 'Hund06450' => 'sun', 'Hund12053' => 'sun', 'Hund16800' => 'sun', 'Hund21222' => 'sun', 'Hund22896' => 'sun', 'Hund23746' => 'sun', 'Hund27083' => 'sun', 'Lalb_Chr02g0141831' => 'lal', 'Lalb_Chr02g0141841' => 'lal', 'Lalb_Chr05g0220411' => 'lal', 'Lalb_Chr06g0162081' => 'lal', 'Lalb_Chr09g0327651' => 'lal', 'Lalb_Chr13g0295051' => 'lal', 'Lalb_Chr15g0086801' => 'lal', 'Lalb_Chr16g0383781' => 'lal', 'Lalb_Chr16g0383791' => 'lal', 'Lalb_Chr18g0055441' => 'lal', 'Lalb_Chr18g0059611' => 'lal', 'Lalb_Chr20g0109661' => 'lal', 'Lalb_Chr20g0109831' => 'lal', 'Lalb_Chr20g0121871' => 'lal', 'Lalb_Chr22g0355361' => 'lal', 'Lalb_Chr25g0286371' => 'lal', 'Lj1A1187G43' => 'lonja', 'Lj1A1205T50' => 'lonja', 'Lj1A800G33' => 'lonja', 'Lj1C1187T7' => 'lonja', 'Lj1C843T11' => 'lonja', 'Lj1g0010940' => 'lja', 'Lj2A288T69' => 'lonja', 'Lj3g0024276' => 'lja', 'Lj4A47T76' => 'lonja', 'Lj4g0005805' => 'lja', 'Lj4g0006097' => 'lja', 'Lj4g0008528' => 'lja', 'Lj4g0024907' => 'lja', 'Lj5g0012472' => 'lja', 'Lj5g0018648' => 'lja', 'Lj6C789G1' => 'lonja', 'Lj6g0004000' => 'lja', 'Lj7A292G67' => 'lonja', 'Lj7A292T64' => 'lonja', 'Lj9A400T58' => 'lonja', 'Lsat_1_v5_gn_1_126181' => 'lsa', 'Lsat_1_v5_gn_4_123041' => 'lsa', 'Lsat_1_v5_gn_4_133620' => 'lsa', 'Lsat_1_v5_gn_4_53221' => 'lsa', 'Lsat_1_v5_gn_4_71961' => 'lsa', 'Lsat_1_v5_gn_7_105241' => 'lsa', 'Lsat_1_v5_gn_7_21361' => 'lsa', 'Lsat_1_v5_gn_7_28860' => 'lsa', 'Lsat_1_v5_gn_7_31260' => 'lsa', 'Lsat_1_v5_gn_8_52801' => 'lsa', 'Manes.02G191400' => 'mes', 'Manes.03G110100' => 'mes', 'Manes.04G071100' => 'mes', 'Manes.05G100500' => 'mes', 'Manes.05G164700' => 'mes', 'Manes.15G087000' => 'mes', 'Manes.15G121500' => 'mes', 'Manes.16G028300' => 'mes', 'Manes.17G046100' => 'mes', 'Manes.17G069800' => 'mes', 'Manes.18G100500' => 'mes', 'Mapoly0002s0109' => 'mpo', 'Mapoly0024s0007' => 'mpo', 'Mapoly0089s0032' => 'mpo', 'MBI04_g42241_MAGBIO' => 'mbi', 'MBI05_g11988_MAGBIO' => 'mbi', 'MBI05_g35452_MAGBIO' => 'mbi', 'MBI07_g30179_MAGBIO' => 'mbi', 'MBI07_g35859_MAGBIO' => 'mbi', 'MBI07_g35860_MAGBIO' => 'mbi', 'MBI07_g37166_MAGBIO' => 'mbi', 'MBI08_g18172_MAGBIO' => 'mbi', 'MBI09_g08441_MAGBIO' => 'mbi', 'MBI13_g01676_MAGBIO' => 'mbi', 'MBI14_g42955_MAGBIO' => 'mbi', 'MBI16_g13161_MAGBIO' => 'mbi', 'MBI17_g27204_MAGBIO' => 'mbi', 'MBI19_g21595_MAGBIO' => 'mbi', 'MD00G1148400' => 'mdo', 'MD02G1301200' => 'mdo', 'MD03G1227800' => 'mdo', 'MD05G1041100' => 'mdo', 'MD05G1124800' => 'mdo', 'MD05G1284000' => 'mdo', 'MD05G1338800' => 'mdo', 'MD05G1338900' => 'mdo', 'MD07G1022800' => 'mdo', 'MD10G1047500' => 'mdo', 'MD10G1127500' => 'mdo', 'MD10G1262300' => 'mdo', 'MD10G1293800' => 'mdo', 'MD16G1074300' => 'mdo', 'Medtr1g021670' => 'mtr', 'Medtr1g096320' => 'mtr', 'Medtr2g013690' => 'mtr', 'Medtr2g019450' => 'mtr', 'Medtr2g085170' => 'mtr', 'Medtr4g088785' => 'mtr', 'Medtr8g055930' => 'mtr', 'Medtr8g085850' => 'mtr', 'MELO3C002605.2' => 'cme', 'MELO3C003891.2' => 'cme', 'MELO3C004012.2' => 'cme', 'MELO3C007134.2' => 'cme', 'MELO3C008118.2' => 'cme', 'MELO3C016700.2' => 'cme', 'MELO3C024127.2' => 'cme', 'MELO3C033361.2' => 'cme', 'MELO3C033362.2' => 'cme', 'Migut.C00430' => 'egut', 'Migut.C01246' => 'egut', 'Migut.E00101' => 'egut', 'Migut.H01486' => 'egut', 'Migut.H01939' => 'egut', 'Migut.K00360' => 'egut', 'Migut.M00910' => 'egut', 'Migut.M01139' => 'egut', 'Migut.N02677' => 'egut', 'MSTRG.13252' => 'ama', 'MSTRG.14701' => 'ama', 'MSTRG.1521' => 'ama', 'MSTRG.15884' => 'ama', 'MSTRG.16242' => 'ama', 'MSTRG.22285' => 'ama', 'MSTRG.22444' => 'ama', 'MSTRG.2349' => 'ama', 'MSTRG.26308' => 'ama', 'MSTRG.28296' => 'ama', 'MSTRG.9895' => 'ama', 'Nitab4.5_0000110g0060' => 'nta', 'Nitab4.5_0000420g0130' => 'nta', 'Nitab4.5_0000422g0030' => 'nta', 'Nitab4.5_0000560g0180' => 'nta', 'Nitab4.5_0000703g0100' => 'nta', 'Nitab4.5_0000786g0200' => 'nta', 'Nitab4.5_0001336g0020' => 'nta', 'Nitab4.5_0001796g0030' => 'nta', 'Nitab4.5_0003348g0060' => 'nta', 'Nitab4.5_0003698g0040' => 'nta', 'Nitab4.5_0003942g0090' => 'nta', 'Nitab4.5_0004775g0070' => 'nta', 'Nitab4.5_0004864g0030' => 'nta', 'Nitab4.5_0005615g0020' => 'nta', 'Nitab4.5_0009288g0030' => 'nta', 'Nitab4.5_0009341g0010' => 'nta', 'Nitab4.5_0009535g0010' => 'nta', 'Nn1g03995' => 'nnu', 'Nn1g04100' => 'nnu', 'Nn1g06530' => 'nnu', 'Nn3g16404' => 'nnu', 'Nn3g17212' => 'nnu', 'Nn3g20776' => 'nnu', 'Nn3g21923' => 'nnu', 'Nn5g27737' => 'nnu', 'Nn5g29461' => 'nnu', 'Nn7g38355' => 'nnu', 'Nn8g39873' => 'nnu', 'Oeu000548.2' => 'oeu', 'Oeu004672.1' => 'oeu', 'Oeu015605.2' => 'oeu', 'Oeu016092.1' => 'oeu', 'Oeu017879.3' => 'oeu', 'Oeu024910.1' => 'oeu', 'Oeu028965.1' => 'oeu', 'Oeu031269.1' => 'oeu', 'Oeu031270.1' => 'oeu', 'Oeu032535.1' => 'oeu', 'Oeu034151.1' => 'oeu', 'Oeu034152.1' => 'oeu', 'Oeu034588.2' => 'oeu', 'Oeu050846.1' => 'oeu', 'Oeu050849.2' => 'oeu', 'Oeu051063.2' => 'oeu', 'Oeu052368.1' => 'oeu', 'Oeu052370.1' => 'oeu', 'Os01g0210400' => 'osa', 'Os01g0304300' => 'osa', 'Os01g0749100' => 'osa', 'Os02g0745800' => 'osa', 'Os03g0769050' => 'osa', 'Os05g0531500' => 'osa', 'Os06g0724300' => 'osa', 'Os11g0198100' => 'osa', 'Peaxi162Scf00069g01425' => 'pax', 'Peaxi162Scf00280g00811' => 'pax', 'Peaxi162Scf00310g00615' => 'pax', 'Peaxi162Scf00362g00542' => 'pax', 'Peaxi162Scf00461g00310' => 'pax', 'Peaxi162Scf00530g00118' => 'pax', 'Peaxi162Scf00541g00057' => 'pax', 'Peaxi162Scf00661g00017' => 'pax', 'Peaxi162Scf00926g00027' => 'pax', 'Peaxi162Scf01064g00263' => 'pax', 'Peaxi162Scf01211g00135' => 'pax', 'PGR004G2336' => 'pgr', 'PGR042G0327' => 'pgr', 'PGR042G1957' => 'pgr', 'PGR042G2003' => 'pgr', 'PGR042G3929' => 'pgr', 'PGR083G1137' => 'pgr', 'PGR083G1364' => 'pgr', 'PGSC0003DMG400003381' => 'stu', 'PGSC0003DMG400003417' => 'stu', 'PGSC0003DMG400008981' => 'stu', 'PGSC0003DMG400012417' => 'stu', 'PGSC0003DMG400012823' => 'stu', 'PGSC0003DMG400016885' => 'stu', 'PGSC0003DMG400022812' => 'stu', 'PGSC0003DMG400029726' => 'stu', 'PGSC0003DMG401009243' => 'stu', 'PGSC0003DMG401031505' => 'stu', 'PGSC0003DMG402031505' => 'stu', 'Phvul.001G017600' => 'pvu', 'Phvul.002G193500' => 'pvu', 'Phvul.002G228900' => 'pvu', 'Phvul.002G236800' => 'pvu', 'Phvul.003G049500' => 'pvu', 'Phvul.005G072000' => 'pvu', 'Phvul.006G164800' => 'pvu', 'Phvul.006G185100' => 'pvu', 'Phvul.007G090000' => 'pvu', 'Potri.001G399800' => 'ptr', 'Potri.002G149900' => 'ptr', 'Potri.004G044100' => 'ptr', 'Potri.004G177600' => 'ptr', 'Potri.009G138000' => 'ptr', 'Potri.010G094000' => 'ptr', 'Potri.011G053000' => 'ptr', 'Potri.011G119300' => 'ptr', 'Potri.013G113700' => 'ptr', 'Potri.018G107800' => 'ptr', 'Potri.019G084100' => 'ptr', 'Pp3c14_23720' => 'ppa', 'Pp3c16_6340' => 'ppa', 'Pp3c23_13420' => 'ppa', 'Pp3c24_2740' => 'ppa', 'Pp3c25_860' => 'ppa', 'Pp3c8_21750' => 'ppa', 'Prupe.1G273000' => 'ppe', 'Prupe.1G273700' => 'ppe', 'Prupe.1G274100' => 'ppe', 'Prupe.2G023300' => 'ppe', 'Prupe.4G048000' => 'ppe', 'Prupe.4G080400' => 'ppe', 'Prupe.4G181200' => 'ppe', 'Prupe.8G056900' => 'ppe', 'Prupe.8G168700' => 'ppe', 'Psat1g189080' => 'psa', 'Psat1g204760' => 'psa', 'Psat4g175560' => 'psa', 'Psat4g177720' => 'psa', 'Psat5g244240' => 'psa', 'Psat6g010720' => 'psa', 'Psat6g187200' => 'psa', 'Psat7g072040' => 'psa', 'PSO017G3501' => 'pso', 'PSO063G2148' => 'pso', 'PSO063G5608' => 'pso', 'PSO210G6392' => 'pso', 'PSO541G2319' => 'pso', 'PSO541G2836' => 'pso', 'PSO541G4012' => 'pso', 'PSO541G6253' => 'pso', 'PSO675G0580' => 'pso', 'PSO675G0856' => 'pso', 'PSO675G5635' => 'pso', 'PSO675G9157' => 'pso', 'PSO832G1660' => 'pso', 'PSO832G1969' => 'pso', 'QL02p007186' => 'qlo', 'QL02p033904' => 'qlo', 'QL03p064391' => 'qlo', 'QL05p040593' => 'qlo', 'QL05p058242' => 'qlo', 'QL08p021825' => 'qlo', 'QL11p004981' => 'qlo', 'RcHm_v2.0_Chr1g0318301' => 'rch', 'RcHm_v2.0_Chr4g0418501' => 'rch', 'RcHm_v2.0_Chr4g0439971' => 'rch', 'RcHm_v2.0_Chr5g0008541' => 'rch', 'RcHm_v2.0_Chr5g0014101' => 'rch', 'RcHm_v2.0_Chr5g0014131' => 'rch', 'RcHm_v2.0_Chr5g0033621' => 'rch', 'RcHm_v2.0_Chr6g0272041' => 'rch', 'RcHm_v2.0_Chr6g0278831' => 'rch', 'Rhsim02G0130400' => 'rsi', 'Rhsim02G0171100' => 'rsi', 'Rhsim05G0053000' => 'rsi', 'Rhsim05G0053100' => 'rsi', 'Rhsim06G0096500' => 'rsi', 'Rhsim06G0096600' => 'rsi', 'Rhsim06G0199100' => 'rsi', 'Rhsim12G0062300' => 'rsi', 'Rhsim12G0062800' => 'rsi', 'Sabra02G0118600' => 'sbr', 'Sabra04G0027300' => 'sbr', 'Sabra04G0119500' => 'sbr', 'Sabra08G0112500' => 'sbr', 'Sabra11G0036800' => 'sbr', 'Sabra11G0103800' => 'sbr', 'Sabra13G0096300' => 'sbr', 'Sabra16G0262300' => 'sbr', 'Sabra18G0091700' => 'sbr', 'Sabra19G0095400' => 'sbr', 'SalBow6G3080' => 'sbo', 'SalBow7G1157' => 'sbo', 'SalBow7G2123' => 'sbo', 'SalBow7G2285' => 'sbo', 'SalBow7G3537' => 'sbo', 'SalBow8G2947' => 'sbo', 'SalBow8G4463' => 'sbo', 'SalBow8G5466' => 'sbo', 'Sc01g0001750' => 'sci', 'Sc02g0006640' => 'sci', 'Sc02g0006670' => 'sci', 'Sc04g0008220' => 'sci', 'Sc05g0006190' => 'sci', 'Sc08g0002760' => 'sci', 'Sc17g0006170' => 'sci', 'Sc22g0002050' => 'sci', 'Sc23g0001190' => 'sci', 'Sc24g0000980' => 'sci', 'Sed0006245' => 'sed', 'Sed0007543' => 'sed', 'Sed0009411' => 'sed', 'Sed0010765' => 'sed', 'Sed0012944' => 'sed', 'Sed0014682' => 'sed', 'Sed0016174' => 'sed', 'Sed0016796' => 'sed', 'Sed0020317' => 'sed', 'Sed0021467' => 'sed', 'SEGI_01316' => 'sgi', 'SEGI_03374' => 'sgi', 'SEGI_16265' => 'sgi', 'SEGI_18569' => 'sgi', 'SEGI_20351' => 'sgi', 'SEGI_26395' => 'sgi', 'SEGI_29469' => 'sgi', 'SEGI_34771' => 'sgi', 'SEGI_36769' => 'sgi', 'SEGI_37139' => 'sgi', 'SGA_v2.0_scaffold100G29687' => 'sas', 'SGA_v2.0_scaffold118G32472' => 'sas', 'SGA_v2.0_scaffold14G07051' => 'sas', 'SGA_v2.0_scaffold183G39845' => 'sas', 'SGA_v2.0_scaffold1G00174' => 'sas', 'SGA_v2.0_scaffold22G09714' => 'sas', 'SGA_v2.0_scaffold333G48992' => 'sas', 'SGA_v2.0_scaffold46G17491' => 'sas', 'SGA_v2.0_scaffold49G18294' => 'sas', 'SGA_v2.0_scaffold63G21658' => 'sas', 'SHI01741' => 'shi', 'SHI05771' => 'shi', 'SHI18077' => 'shi', 'SHI20525' => 'shi', 'SHI20527' => 'shi', 'SHI20528' => 'shi', 'SMO172G0185' => 'smo', 'SMO198G0020' => 'smo', 'SMO351G0006' => 'smo', 'SMO356G0118' => 'smo', 'SMO358G0296' => 'smo', 'SMO367G0079' => 'smo', 'SMO367G1277' => 'smo', 'Solyc01g014220.3' => 'sly', 'Solyc01g111770.2' => 'sly', 'Solyc02g078180.3' => 'sly', 'Solyc03g006430.3' => 'sly', 'Solyc03g006456.1' => 'sly', 'Solyc03g079860.2' => 'sly', 'Solyc04g079770.3' => 'sly', 'Solyc05g007430.4' => 'sly', 'Solyc07g063150.3' => 'sly', 'Solyc08g016620.3' => 'sly', 'Solyc09g057590.3' => 'sly', 'Solyc09g057600.1' => 'sly', 'Solyc10g009050.3' => 'sly', 'Solyc11g017420.2' => 'sly', 'Sopen01g053810' => 'spe', 'Sopen02g023040' => 'spe', 'Sopen03g002440' => 'spe', 'Sopen04g033350' => 'spe', 'Sopen05g003310' => 'spe', 'Sopen07g004050' => 'spe', 'Sopen07g031340' => 'spe', 'Sopen08g006990' => 'spe', 'Sopen10g004830' => 'spe', 'Sopen11g009370' => 'spe', 'Sp1g24450' => 'spa', 'Sp1g29670' => 'spa', 'Sp1g39600' => 'spa', 'Sp2g11080' => 'spa', 'Sp2g13970' => 'spa', 'Sp4g16130' => 'spa', 'Sp6g13080' => 'spa', 'Sp7g37270' => 'spa', 'TAR371G0065' => 'tar', 'TAR376G0340' => 'tar', 'TAR376G0435' => 'tar', 'TAR381G0002' => 'tar', 'TAR381G1236' => 'tar', 'TAR624G0055' => 'tar', 'TAR624G0324' => 'tar', 'TAR624G0696' => 'tar', 'TAR624G0906' => 'tar', 'TAR625G0107' => 'tar', 'TAR626G0015' => 'tar', 'TAR626G1356' => 'tar', 'TAR627G0888' => 'tar', 'TAR628G0399' => 'tar', 'TAR628G1327' => 'tar', 'TAR629G2831' => 'tar', 'TAR629G2874' => 'tar', 'TAR633G1432' => 'tar', 'TAR633G2771' => 'tar', 'THA.LOC104803394' => 'tha', 'THA.LOC104805153' => 'tha', 'THA.LOC104806784' => 'tha', 'THA.LOC104810473' => 'tha', 'THA.LOC104813100' => 'tha', 'THA.LOC104814215' => 'tha', 'THA.LOC104815554' => 'tha', 'THA.LOC104820544' => 'tha', 'THA.LOC104824754' => 'tha', 'THA.LOC104827717' => 'tha', 'Thecc.02G031400' => 'tca', 'Thecc.02G055900' => 'tca', 'Thecc.02G350800' => 'tca', 'Thecc.06G150900' => 'tca', 'Thecc.06G186600' => 'tca', 'Thecc.07G089600' => 'tca', 'Thecc.08G020400' => 'tca', 'Thecc.08G182100' => 'tca', 'Thhalv10000873m.g' => 'esa', 'Thhalv10004185m.g' => 'esa', 'Thhalv10006981m.g' => 'esa', 'Thhalv10007204m.g' => 'esa', 'Thhalv10011374m.g' => 'esa', 'Thhalv10013482m.g' => 'esa', 'Thhalv10017801m.g' => 'esa', 'Thhalv10024983m.g' => 'esa', 'TPR.G12072' => 'tpr', 'TPR.G15769' => 'tpr', 'TPR.G16504' => 'tpr', 'TPR.G16506' => 'tpr', 'TPR.G24345' => 'tpr', 'TPR.G26666' => 'tpr', 'TPR.G27320' => 'tpr', 'TPR.G31819' => 'tpr', 'TPR.G38879' => 'tpr', 'TPR.G39015' => 'tpr', 'TPR.G8819' => 'tpr', 'TWI09G0924' => 'twi', 'TWI12G0811' => 'twi', 'TWI12G1294' => 'twi', 'TWI31G0150' => 'twi', 'TWI36G1262' => 'twi', 'TWI38G1287' => 'twi', 'TWI38G1633' => 'twi', 'TWI38G1982' => 'twi', 'TWI39G0116' => 'twi', 'TWI60G1011' => 'twi', 'TWI63G0171' => 'twi', 'TWI73G0839' => 'twi', 'TWI79G1511' => 'twi', 'unitig_0.g915' => 'ugi', 'unitig_0.g916' => 'ugi', 'unitig_21.g20219' => 'ugi', 'unitig_21.g20416' => 'ugi', 'unitig_578.g16132' => 'ugi', 'unitig_578.g16718' => 'ugi', 'unitig_62.g23481' => 'ugi', 'unitig_744.g24535' => 'ugi', 'unitig_749.g13525' => 'ugi', 'vmacro01248' => 'vma', 'vmacro02290' => 'vma', 'vmacro10946' => 'vma', 'vmacro11865' => 'vma', 'vmacro12493' => 'vma', 'vmacro17322' => 'vma', 'vmacro21599' => 'vma', 'vmacro23041' => 'vma', 'VMungo0251G0004' => 'vmu', 'VMungo0251G2639' => 'vmu', 'VMungo0251G2967' => 'vmu', 'VMungo0540G0864' => 'vmu', 'VMungo0540G1569' => 'vmu', 'VMungo0647G0317' => 'vmu', 'VMungo0720G1373' => 'vmu', 'VMungo0720G1508' => 'vmu', 'VMungo1080G0485' => 'vmu', 'VMungo1215G3177' => 'vmu', 'Zm00001eb112600' => 'zma', 'Zm00001eb120220' => 'zma', 'Zm00001eb153240' => 'zma', 'Zm00001eb168880' => 'zma', 'Zm00001eb213920' => 'zma', 'Zm00001eb228280' => 'zma', 'Zm00001eb254580' => 'zma', 'Zm00001eb272180' => 'zma', 'Zm00001eb293190' => 'zma', 'Zm00001eb322930' => 'zma', 'Zm00001eb353360' => 'zma', 'Zm00001eb353390' => 'zma', 'Zm00001eb353430' => 'zma', 'Zm00001eb353440' => 'zma', 'Zm00001eb353780' => 'zma' ) $gf_id = 'HOM05D000499' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000499' ) $data_identifier = 'HOM05D000499' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 29, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 12, 'amhyb' => (int) 8, 'aly' => (int) 12, 'aox' => (int) 9, 'arhy' => (int) 26, 'ath' => (int) 8, 'atr' => (int) 7, 'acertr' => (int) 10, 'cqu' => (int) 15, 'bca' => (int) 29, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 11, 'cansat' => (int) 8, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 9, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 8, 'cpa' => (int) 10, 'csa' => (int) 7, 'camsi' => (int) 20, 'dca' => (int) 8, 'din' => (int) 12, 'dzi' => (int) 14, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 6, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 38, 'gra' => (int) 16, 'vvi' => (int) 8, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 5, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 11, 'lja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 11, 'mpo' => (int) 3, 'mbi' => (int) 14, 'mdo' => (int) 14, 'mtr' => (int) 8, 'cme' => (int) 9, 'egut' => (int) 9, 'ama' => (int) 11, 'nta' => (int) 17, 'nnu' => (int) 11, 'oeu' => (int) 18, 'osa' => (int) 8, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 6, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 9, 'rsi' => (int) 9, 'sbr' => (int) 10, 'sbo' => (int) 8, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 10, 'sas' => (int) 10, 'shi' => (int) 6, 'smo' => (int) 7, 'sly' => (int) 14, 'spe' => (int) 10, 'spa' => (int) 8, 'tar' => (int) 19, 'tha' => (int) 10, 'tca' => (int) 8, 'esa' => (int) 8, 'tpr' => (int) 11, 'twi' => (int) 13, 'ugi' => (int) 9, 'vma' => (int) 8, 'vmu' => (int) 10, 'zma' => (int) 15 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb353780' $species_info = array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ) $local_species = 'cpa' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000499', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1066', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p29780' => 'bna', 'A02p33180' => 'bna', 'A03p16470' => 'bna', 'A03p66010' => 'bna', 'A04p25970' => 'bna', 'A06p01270' => 'bna', 'A06p46080' => 'bna', 'A07p11400' => 'bna', 'A08p01840' => 'bna', 'A08p08230' => 'bna', 'A08p25740' => 'bna', 'A09p32070' => 'bna', 'A09p37830' => 'bna', 'A09p42840' => 'bna', 'A09p42850' => 'bna', 'Aa31LG10G2060' => 'aar', 'Aa31LG2G7410' => 'aar', 'Aa31LG6G10200' => 'aar', 'Aa31LG6G16680' => 'aar', 'Aa31LG6G8470' => 'aar', 'Aa31LG9G12730' => 'aar', 'Aa31LG9G13680' => 'aar', 'Aa31LG9G14920' => 'aar', 'Aa31LG9G6650' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4977' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5467' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3254' => 'aag', 'Actinidia02578' => 'ach', 'Actinidia07693' => 'ach', 'Actinidia08413' => 'ach', 'Actinidia08414' => 'ach', 'Actinidia15289' => 'ach', 'Actinidia19871' => 'ach', 'Actinidia21475' => 'ach', 'Actinidia22576' => 'ach', 'Actinidia28327' => 'ach', 'Actinidia32491' => 'ach', 'Actinidia39463' => 'ach', 'Actinidia39571' => 'ach', 'Ah.01g013750' => 'amhyb', 'Ah.01g023210' => 'amhyb', 'Ah.04g164850' => 'amhyb', 'Ah.05g178060' => 'amhyb', 'Ah.07g204270' => 'amhyb', 'Ah.07g208480' => 'amhyb', 'Ah.09g237410' => 'amhyb', 'Ah.14g089460' => 'amhyb', 'AL1G41790' => 'aly', 'AL1G49050' => 'aly', 'AL1G53810' => 'aly', 'AL1G61400' => 'aly', 'AL4G18580' => 'aly', 'AL5G12510' => 'aly', 'AL5G12540' => 'aly', 'AL6G43230' => 'aly', 'AL7G10370' => 'aly', 'AL7G19250' => 'aly', 'AL8G12240' => 'aly', 'AL8G18540' => 'aly', 'Aqoxy1G02409' => 'aox', 'Aqoxy2G03993' => 'aox', 'Aqoxy3G03357' => 'aox', 'Aqoxy4G00785' => 'aox', 'Aqoxy5G02598' => 'aox', 'Aqoxy6G00132' => 'aox', 'Aqoxy7G01776' => 'aox', 'Aqoxy7G02316' => 'aox', 'Aqoxy7G03973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.12AFKW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B8730' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27IQR1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3F75VG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3RE0GA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41TCQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.527VTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FIR39' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5W8UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DA38EV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ63HS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H1I32C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HC27T5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4M8AP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7N3CZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9UVDZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LS1NQA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT1D4B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SKC4TM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCFV76' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF9Q1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQWD9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1ZM88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WE07RT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YCK7VH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJE6Q6' => 'arhy', 'AT1G28240' => 'ath', 'AT1G34550' => 'ath', 'AT1G53040' => 'ath', 'AT2G02910' => 'ath', 'AT4G09630' => 'ath', 'AT4G38500' => 'ath', 'AT5G42660' => 'ath', 'AT5G46220' => 'ath', 'ATR0152G026' => 'atr', 'ATR0564G343' => 'atr', 'ATR0706G151' => 'atr', 'ATR0733G207' => 'atr', 'ATR0751G234' => 'atr', 'ATR0807G048' => 'atr', 'ATR1091G084' => 'atr', 'Atru.chr10.1229' => 'acertr', 'Atru.chr10.1230' => 'acertr', 'Atru.chr10.1874' => 'acertr', 'Atru.chr11.1808' => 'acertr', 'Atru.chr13.1795' => 'acertr', 'Atru.chr13.570' => 'acertr', 'Atru.chr2.2608' => 'acertr', 'Atru.chr2.2609' => 'acertr', 'Atru.chr5.3428' => 'acertr', 'Atru.chr8.1171' => 'acertr', 'AUR62004651' => 'cqu', 'AUR62008675' => 'cqu', 'AUR62010014' => 'cqu', 'AUR62013004' => 'cqu', 'AUR62014825' => 'cqu', 'AUR62015015' => 'cqu', 'AUR62015151' => 'cqu', 'AUR62017020' => 'cqu', 'AUR62019422' => 'cqu', 'AUR62023570' => 'cqu', 'AUR62025571' => 'cqu', 'AUR62029098' => 'cqu', 'AUR62033863' => 'cqu', 'AUR62034296' => 'cqu', 'AUR62040075' => 'cqu', 'BcaB02g07334' => 'bca', 'BcaB02g10575' => 'bca', 'BcaB03g12119' => 'bca', 'BcaB03g12120' => 'bca', 'BcaB03g13945' => 'bca', 'BcaB04g17123' => 'bca', 'BcaB04g17867' => 'bca', 'BcaB04g19839' => 'bca', 'BcaB07g30317' => 'bca', 'BcaB07g32432' => 'bca', 'BcaB07g33362' => 'bca', 'BcaB08g36611' => 'bca', 'BcaC01g00028' => 'bca', 'BcaC01g01356' => 'bca', 'BcaC01g02034' => 'bca', 'BcaC01g06051' => 'bca', 'BcaC03g16839' => 'bca', 'BcaC03g17176' => 'bca', 'BcaC05g26829' => 'bca', 'BcaC06g31490' => 'bca', 'BcaC06g35344' => 'bca', 'BcaC06g36570' => 'bca', 'BcaC07g37537' => 'bca', 'BcaC08g43491' => 'bca', 'BcaC08g43773' => 'bca', 'BcaNung00234' => 'bca', 'BcaNung01982' => 'bca', 'BcaNung03707' => 'bca', 'BcaNung06454' => 'bca', 'BolC2t10762H' => 'bol', 'BolC2t11191H' => 'bol', 'BolC3t14322H' => 'bol', 'BolC3t19747H' => 'bol', 'BolC3t21425H' => 'bol', 'BolC4t27800H' => 'bol', 'BolC5t31423H' => 'bol', 'BolC6t35951H' => 'bol', 'BolC6t36282H' => 'bol', 'BolC7t40678H' => 'bol', 'BolC7t40679H' => 'bol', 'BolC7t42222H' => 'bol', 'BolC7t43492H' => 'bol', 'BolC7t46785H' => 'bol', 'BolC8t47853H' => 'bol', 'BolC9t56805H' => 'bol', 'BraA02t08000Z' => 'bra', 'BraA02t08341Z' => 'bra', 'BraA03t10936Z' => 'bra', 'BraA03t15657Z' => 'bra', 'BraA04t18100Z' => 'bra', 'BraA05t20523Z' => 'bra', 'BraA06t23353Z' => 'bra', 'BraA06t27473Z' => 'bra', 'BraA06t27769Z' => 'bra', 'BraA07t28928Z' => 'bra', 'BraA08t32236Z' => 'bra', 'BraA08t32841Z' => 'bra', 'BraA08t34524Z' => 'bra', 'BraA09t38742Z' => 'bra', 'BraA09t39295Z' => 'bra', 'C02p47180' => 'bna', 'C02p50990' => 'bna', 'C03p19360' => 'bna', 'C03p74950' => 'bna', 'C03p91000' => 'bna', 'C04p63260' => 'bna', 'C05p27050' => 'bna', 'C06p08750' => 'bna', 'C06p11490' => 'bna', 'C07p02820' => 'bna', 'C07p17180' => 'bna', 'C07p29440' => 'bna', 'C07p63730' => 'bna', 'C09p39260' => 'bna', 'CAN.G1164.34' => 'can', 'CAN.G1164.39' => 'can', 'CAN.G1530.3' => 'can', 'CAN.G162.61' => 'can', 'CAN.G176.6' => 'can', 'CAN.G289.49' => 'can', 'CAN.G370.21' => 'can', 'CAN.G370.22' => 'can', 'CAN.G371.117' => 'can', 'CAN.G58.37' => 'can', 'CAN.G588.98' => 'can', 'CANSAT21G2266' => 'cansat', 'CANSAT25G2799' => 'cansat', 'CANSAT35G0862' => 'cansat', 'CANSAT35G1704' => 'cansat', 'CANSAT35G1760' => 'cansat', 'CANSAT56G3971' => 'cansat', 'CANSAT56G4116' => 'cansat', 'CANSAT80G1259' => 'cansat', 'CARHR027730' => 'chi', 'CARHR033880' => 'chi', 'CARHR043270' => 'chi', 'CARHR145330' => 'chi', 'CARHR145340' => 'chi', 'CARHR175570' => 'chi', 'CARHR181570' => 'chi', 'CARHR258470' => 'chi', 'CARHR260490' => 'chi', 'CARHR294220' => 'chi', 'Carub.0001s2668' => 'cru', 'Carub.0001s3257' => 'cru', 'Carub.0001s4220' => 'cru', 'Carub.0005s0179' => 'cru', 'Carub.0006s2807' => 'cru', 'Carub.0007s0039' => 'cru', 'Carub.0008s0169' => 'cru', 'Carub.0008s0636' => 'cru', 'Ca_00338_v3' => 'car', 'Ca_00542_v3' => 'car', 'Ca_01844_v3' => 'car', 'Ca_10611_v3' => 'car', 'Ca_13326_v3' => 'car', 'Ca_17944_v3' => 'car', 'Ca_18546_v3' => 'car', 'Ca_24219_v3' => 'car', 'Ca_29972_v3' => 'car', 'CBR_g3681' => 'cbr', 'CBR_g40021' => 'cbr', 'Cc01_g08140' => 'ccan', 'Cc02_g13410' => 'ccan', 'Cc02_g37480' => 'ccan', 'Cc05_g12030' => 'ccan', 'Cc09_g03370' => 'ccan', 'Cc09_g10300' => 'ccan', 'Cc10_g03530' => 'ccan', 'Cc10_g11380' => 'ccan', 'CDE01G0176' => 'cde', 'CDE02G0675' => 'cde', 'CDE02G0942' => 'cde', 'CDE02G1153' => 'cde', 'CDE02G4177' => 'cde', 'CDE04G2117' => 'cde', 'CDE04G2736' => 'cde', 'CDE08G1161' => 'cde', 'CDE09G1238' => 'cde', 'Cfa000467' => 'cfa', 'Cfa000947' => 'cfa', 'Cfa004969' => 'cfa', 'Cfa005284' => 'cfa', 'Cfa008993' => 'cfa', 'Cfa018187' => 'cfa', 'Cfa018454' => 'cfa', 'Cfa020585' => 'cfa', 'Ciclev10000424m.g' => 'ccl', 'Ciclev10003605m.g' => 'ccl', 'Ciclev10007828m.g' => 'ccl', 'Ciclev10014620m.g' => 'ccl', 'Ciclev10015169m.g' => 'ccl', 'Ciclev10018291m.g' => 'ccl', 'Ciclev10028256m.g' => 'ccl', 'Ciclev10033822m.g' => 'ccl', 'CiPaw.05G060300' => 'cil', 'CiPaw.05G085000' => 'cil', 'CiPaw.06G083700' => 'cil', 'CiPaw.06G120300' => 'cil', 'CiPaw.09G060500' => 'cil', 'CiPaw.09G123800' => 'cil', 'CiPaw.11G169700' => 'cil', 'CiPaw.12G118300' => 'cil', 'CiPaw.15G071000' => 'cil', 'CiPaw.15G081900' => 'cil', 'ClCG01G024610' => 'cla', 'ClCG03G006070' => 'cla', 'ClCG05G019250' => 'cla', 'ClCG09G009500' => 'cla', 'ClCG11G008200' => 'cla', 'ClCG11G018080' => 'cla', 'COL.COLO4_17373' => 'col', 'COL.COLO4_22994' => 'col', 'COL.COLO4_26389' => 'col', 'COL.COLO4_27170' => 'col', 'COL.COLO4_31074' => 'col', 'COL.COLO4_31465' => 'col', 'COL.COLO4_36438' => 'col', 'COL.COLO4_36439' => 'col', 'Cpa.g.c38781' => 'cpa', 'Cpa.g.sc128.12' => 'cpa', 'Cpa.g.sc166.7' => 'cpa', 'Cpa.g.sc166.8' => 'cpa', 'Cpa.g.sc20.111' => 'cpa', 'Cpa.g.sc27.31' => 'cpa', 'Cpa.g.sc64.36' => 'cpa', 'Cpa.g.sc64.37' => 'cpa', 'Cpa.g.sc66.49' => 'cpa', 'Cpa.g.sc80.64' => 'cpa', 'CsaV3_1G012320' => 'csa', 'CsaV3_2G008480' => 'csa', 'CsaV3_2G033450' => 'csa', 'CsaV3_3G044830' => 'csa', 'CsaV3_4G033710' => 'csa', 'CsaV3_6G051730' => 'csa', 'CsaV3_7G025350' => 'csa', 'CSS0001067' => 'camsi', 'CSS0005996' => 'camsi', 'CSS0006590' => 'camsi', 'CSS0009673' => 'camsi', 'CSS0010201' => 'camsi', 'CSS0010549' => 'camsi', 'CSS0011364' => 'camsi', 'CSS0014473' => 'camsi', 'CSS0014961' => 'camsi', 'CSS0020191' => 'camsi', 'CSS0021165' => 'camsi', 'CSS0022306' => 'camsi', 'CSS0030591' => 'camsi', 'CSS0030696' => 'camsi', 'CSS0032653' => 'camsi', 'CSS0037487' => 'camsi', 'CSS0041102' => 'camsi', 'CSS0041261' => 'camsi', 'CSS0046246' => 'camsi', 'CSS0049256' => 'camsi', 'DCAR_004075' => 'dca', 'DCAR_011538' => 'dca', 'DCAR_019553' => 'dca', 'DCAR_020952' => 'dca', 'DCAR_021739' => 'dca', 'DCAR_027407' => 'dca', 'DCAR_027913' => 'dca', 'DCAR_028066' => 'dca', 'Dinv05899' => 'din', 'Dinv07563' => 'din', 'Dinv08010' => 'din', 'Dinv14125' => 'din', 'Dinv20172' => 'din', 'Dinv30743' => 'din', 'Dinv31229' => 'din', 'Dinv34162' => 'din', 'Dinv36028' => 'din', 'Dinv39368' => 'din', 'Dinv40565' => 'din', 'Dinv41706' => 'din', 'Duzib052G0089' => 'dzi', 'Duzib116G0641' => 'dzi', 'Duzib132G0069' => 'dzi', 'Duzib132G1219' => 'dzi', 'Duzib147G0278' => 'dzi', 'Duzib160G0480' => 'dzi', 'Duzib170G0661' => 'dzi', 'Duzib177G0591' => 'dzi', 'Duzib187G1353' => 'dzi', 'Duzib192G0858' => 'dzi', 'Duzib192G0883' => 'dzi', 'Duzib213G0506' => 'dzi', 'Duzib235G0289' => 'dzi', 'Duzib251G0422' => 'dzi', 'ECA232G3898' => 'eca', 'ECA233G5950' => 'eca', 'ECA234G1699' => 'eca', 'ECA234G2421' => 'eca', 'ECA236G0426' => 'eca', 'ECA236G4331' => 'eca', 'ECA248G2573' => 'eca', 'EL10Ac1g00077' => 'bvu', 'EL10Ac1g01746' => 'bvu', 'EL10Ac2g03464' => 'bvu', 'EL10Ac4g08176' => 'bvu', 'EL10Ac7g17521' => 'bvu', 'EL10Ac8g20386' => 'bvu', 'EL10Ac9g21343' => 'bvu', 'EL10Ac9g22688' => 'bvu', 'Eucgr.B03434' => 'egr', 'Eucgr.D00618' => 'egr', 'Eucgr.E02395' => 'egr', 'Eucgr.F01129' => 'egr', 'Eucgr.F02622' => 'egr', 'Eucgr.F04207' => 'egr', 'FAN01G0570' => 'fan', 'FAN03G3351' => 'fan', 'FAN06G3702' => 'fan', 'FAN07G2149' => 'fan', 'FAN10G3758' => 'fan', 'FAN11G1170' => 'fan', 'FAN11G2050' => 'fan', 'FAN11G2724' => 'fan', 'FAN12G1700' => 'fan', 'FAN12G2028' => 'fan', 'FAN15G1160' => 'fan', 'FAN15G3063' => 'fan', 'FAN16G2540' => 'fan', 'FAN16G3077' => 'fan', 'FAN16G3624' => 'fan', 'FAN17G0221' => 'fan', 'FAN20G2492' => 'fan', 'FAN20G2905' => 'fan', 'FAN21G0548' => 'fan', 'FAN21G1300' => 'fan', 'FAN22G0077' => 'fan', 'FAN22G1315' => 'fan', 'FAN24G1280' => 'fan', 'FAN24G1445' => 'fan', 'FAN24G3527' => 'fan', 'FAN25G0464' => 'fan', 'FAN25G2885' => 'fan', 'FAN25G3270' => 'fan', 'FAN27G1101' => 'fan', 'FAN27G2846' => 'fan', 'FAN27G3524' => 'fan', 'FvH4_2g11770' => 'fve', 'FvH4_2g15630' => 'fve', 'FvH4_3g05570' => 'fve', 'FvH4_3g09110' => 'fve', 'FvH4_3g19940' => 'fve', 'FvH4_4g04821' => 'fve', 'FvH4_4g31480' => 'fve', 'FvH4_7g01740' => 'fve', 'Glyma.05G130400' => 'gma', 'Glyma.05G156400' => 'gma', 'Glyma.07G197000' => 'gma', 'Glyma.08G085151' => 'gma', 'Glyma.08G114500' => 'gma', 'Glyma.08G300400' => 'gma', 'Glyma.10G215800' => 'gma', 'Glyma.12G224400' => 'gma', 'Glyma.13G179300' => 'gma', 'Glyma.13G218151' => 'gma', 'Glyma.13G238800' => 'gma', 'Glyma.13G276900' => 'gma', 'Glyma.14G078200' => 'gma', 'Glyma.15G074500' => 'gma', 'Glyma.15G094100' => 'gma', 'Glyma.17G247200' => 'gma', 'Glyma.18G120100' => 'gma', 'Glyma.20G176000' => 'gma', 'Gohir.A01G063600' => 'ghi', 'Gohir.A01G170301' => 'ghi', 'Gohir.A02G060500' => 'ghi', 'Gohir.A05G133850' => 'ghi', 'Gohir.A05G161400' => 'ghi', 'Gohir.A06G012900' => 'ghi', 'Gohir.A06G035901' => 'ghi', 'Gohir.A06G127100' => 'ghi', 'Gohir.A06G210500' => 'ghi', 'Gohir.A08G008650' => 'ghi', 'Gohir.A09G072700' => 'ghi', 'Gohir.A09G088301' => 'ghi', 'Gohir.A10G040600' => 'ghi', 'Gohir.A12G036300' => 'ghi', 'Gohir.A12G143350' => 'ghi', 'Gohir.A12G165500' => 'ghi', 'Gohir.A13G145700' => 'ghi', 'Gohir.D01G050000' => 'ghi', 'Gohir.D01G051366' => 'ghi', 'Gohir.D01G161350' => 'ghi', 'Gohir.D02G065900' => 'ghi', 'Gohir.D05G164200' => 'ghi', 'Gohir.D05G355500' => 'ghi', 'Gohir.D06G010400' => 'ghi', 'Gohir.D06G111250' => 'ghi', 'Gohir.D06G132000' => 'ghi', 'Gohir.D06G210500' => 'ghi', 'Gohir.D07G165675' => 'ghi', 'Gohir.D08G062240' => 'ghi', 'Gohir.D08G086101' => 'ghi', 'Gohir.D08G138060' => 'ghi', 'Gohir.D09G072300' => 'ghi', 'Gohir.D10G041400' => 'ghi', 'Gohir.D11G191020' => 'ghi', 'Gohir.D11G212066' => 'ghi', 'Gohir.D12G036300' => 'ghi', 'Gohir.D12G168600' => 'ghi', 'Gohir.D13G150600' => 'ghi', 'Gorai.001G057300' => 'gra', 'Gorai.002G069900' => 'gra', 'Gorai.002G200000' => 'gra', 'Gorai.003G067600' => 'gra', 'Gorai.005G074800' => 'gra', 'Gorai.006G087300' => 'gra', 'Gorai.008G037500' => 'gra', 'Gorai.008G181400' => 'gra', 'Gorai.009G169400' => 'gra', 'Gorai.009G387900' => 'gra', 'Gorai.010G013300' => 'gra', 'Gorai.010G153800' => 'gra', 'Gorai.010G255800' => 'gra', 'Gorai.011G043700' => 'gra', 'Gorai.011G198900' => 'gra', 'Gorai.013G168400' => 'gra', 'GSVIVG01005212001' => 'vvi', 'GSVIVG01006163001' => 'vvi', 'GSVIVG01009625001' => 'vvi', 'GSVIVG01014338001' => 'vvi', 'GSVIVG01020005001' => 'vvi', 'GSVIVG01021450001' => 'vvi', 'GSVIVG01023975001' => 'vvi', 'GSVIVG01034490001' => 'vvi', 'HanXRQChr04g0112071' => 'han', 'HanXRQChr05g0131151' => 'han', 'HanXRQChr09g0262371' => 'han', 'HanXRQChr09g0268401' => 'han', 'HanXRQChr10g0279241' => 'han', 'HanXRQChr10g0297961' => 'han', 'HanXRQChr11g0326231' => 'han', 'HanXRQChr11g0328471' => 'han', 'HanXRQChr16g0507941' => 'han', 'HanXRQChr17g0560211' => 'han', 'Haze_02108' => 'cav', 'Haze_02428' => 'cav', 'Haze_05593' => 'cav', 'Haze_06448' => 'cav', 'Haze_09427' => 'cav', 'Haze_12022' => 'cav', 'Haze_17612' => 'cav', 'Haze_17928' => 'cav', 'Hma1.2p1_0032F.1_g019250' => 'hma', 'Hma1.2p1_0163F.1_g072690' => 'hma', 'Hma1.2p1_0265F.1_g106710' => 'hma', 'Hma1.2p1_0286F.1_g113970' => 'hma', 'Hma1.2p1_0363F.1_g136640' => 'hma', 'Hma1.2p1_0584F.1_g183470' => 'hma', 'Hma1.2p1_0885F.1_g232570' => 'hma', 'HPP92_006022' => 'vpl', 'HPP92_007320' => 'vpl', 'HPP92_011521' => 'vpl', 'HPP92_019387' => 'vpl', 'HPP92_024038' => 'vpl', 'Hund05891' => 'sun', 'Hund06450' => 'sun', 'Hund12053' => 'sun', 'Hund16800' => 'sun', 'Hund21222' => 'sun', 'Hund22896' => 'sun', 'Hund23746' => 'sun', 'Hund27083' => 'sun', 'Lalb_Chr02g0141831' => 'lal', 'Lalb_Chr02g0141841' => 'lal', 'Lalb_Chr05g0220411' => 'lal', 'Lalb_Chr06g0162081' => 'lal', 'Lalb_Chr09g0327651' => 'lal', 'Lalb_Chr13g0295051' => 'lal', 'Lalb_Chr15g0086801' => 'lal', 'Lalb_Chr16g0383781' => 'lal', 'Lalb_Chr16g0383791' => 'lal', 'Lalb_Chr18g0055441' => 'lal', 'Lalb_Chr18g0059611' => 'lal', 'Lalb_Chr20g0109661' => 'lal', 'Lalb_Chr20g0109831' => 'lal', 'Lalb_Chr20g0121871' => 'lal', 'Lalb_Chr22g0355361' => 'lal', 'Lalb_Chr25g0286371' => 'lal', 'Lj1A1187G43' => 'lonja', 'Lj1A1205T50' => 'lonja', 'Lj1A800G33' => 'lonja', 'Lj1C1187T7' => 'lonja', 'Lj1C843T11' => 'lonja', 'Lj1g0010940' => 'lja', 'Lj2A288T69' => 'lonja', 'Lj3g0024276' => 'lja', 'Lj4A47T76' => 'lonja', 'Lj4g0005805' => 'lja', 'Lj4g0006097' => 'lja', 'Lj4g0008528' => 'lja', 'Lj4g0024907' => 'lja', 'Lj5g0012472' => 'lja', 'Lj5g0018648' => 'lja', 'Lj6C789G1' => 'lonja', 'Lj6g0004000' => 'lja', 'Lj7A292G67' => 'lonja', 'Lj7A292T64' => 'lonja', 'Lj9A400T58' => 'lonja', 'Lsat_1_v5_gn_1_126181' => 'lsa', 'Lsat_1_v5_gn_4_123041' => 'lsa', 'Lsat_1_v5_gn_4_133620' => 'lsa', 'Lsat_1_v5_gn_4_53221' => 'lsa', 'Lsat_1_v5_gn_4_71961' => 'lsa', 'Lsat_1_v5_gn_7_105241' => 'lsa', 'Lsat_1_v5_gn_7_21361' => 'lsa', 'Lsat_1_v5_gn_7_28860' => 'lsa', 'Lsat_1_v5_gn_7_31260' => 'lsa', 'Lsat_1_v5_gn_8_52801' => 'lsa', 'Manes.02G191400' => 'mes', 'Manes.03G110100' => 'mes', 'Manes.04G071100' => 'mes', 'Manes.05G100500' => 'mes', 'Manes.05G164700' => 'mes', 'Manes.15G087000' => 'mes', 'Manes.15G121500' => 'mes', 'Manes.16G028300' => 'mes', 'Manes.17G046100' => 'mes', 'Manes.17G069800' => 'mes', 'Manes.18G100500' => 'mes', 'Mapoly0002s0109' => 'mpo', 'Mapoly0024s0007' => 'mpo', 'Mapoly0089s0032' => 'mpo', 'MBI04_g42241_MAGBIO' => 'mbi', 'MBI05_g11988_MAGBIO' => 'mbi', 'MBI05_g35452_MAGBIO' => 'mbi', 'MBI07_g30179_MAGBIO' => 'mbi', 'MBI07_g35859_MAGBIO' => 'mbi', 'MBI07_g35860_MAGBIO' => 'mbi', 'MBI07_g37166_MAGBIO' => 'mbi', 'MBI08_g18172_MAGBIO' => 'mbi', 'MBI09_g08441_MAGBIO' => 'mbi', 'MBI13_g01676_MAGBIO' => 'mbi', 'MBI14_g42955_MAGBIO' => 'mbi', 'MBI16_g13161_MAGBIO' => 'mbi', 'MBI17_g27204_MAGBIO' => 'mbi', 'MBI19_g21595_MAGBIO' => 'mbi', 'MD00G1148400' => 'mdo', 'MD02G1301200' => 'mdo', 'MD03G1227800' => 'mdo', 'MD05G1041100' => 'mdo', 'MD05G1124800' => 'mdo', 'MD05G1284000' => 'mdo', 'MD05G1338800' => 'mdo', 'MD05G1338900' => 'mdo', 'MD07G1022800' => 'mdo', 'MD10G1047500' => 'mdo', 'MD10G1127500' => 'mdo', 'MD10G1262300' => 'mdo', 'MD10G1293800' => 'mdo', 'MD16G1074300' => 'mdo', 'Medtr1g021670' => 'mtr', 'Medtr1g096320' => 'mtr', 'Medtr2g013690' => 'mtr', 'Medtr2g019450' => 'mtr', 'Medtr2g085170' => 'mtr', 'Medtr4g088785' => 'mtr', 'Medtr8g055930' => 'mtr', 'Medtr8g085850' => 'mtr', 'MELO3C002605.2' => 'cme', 'MELO3C003891.2' => 'cme', 'MELO3C004012.2' => 'cme', 'MELO3C007134.2' => 'cme', 'MELO3C008118.2' => 'cme', 'MELO3C016700.2' => 'cme', 'MELO3C024127.2' => 'cme', 'MELO3C033361.2' => 'cme', 'MELO3C033362.2' => 'cme', 'Migut.C00430' => 'egut', 'Migut.C01246' => 'egut', 'Migut.E00101' => 'egut', 'Migut.H01486' => 'egut', 'Migut.H01939' => 'egut', 'Migut.K00360' => 'egut', 'Migut.M00910' => 'egut', 'Migut.M01139' => 'egut', 'Migut.N02677' => 'egut', 'MSTRG.13252' => 'ama', 'MSTRG.14701' => 'ama', 'MSTRG.1521' => 'ama', 'MSTRG.15884' => 'ama', 'MSTRG.16242' => 'ama', 'MSTRG.22285' => 'ama', 'MSTRG.22444' => 'ama', 'MSTRG.2349' => 'ama', 'MSTRG.26308' => 'ama', 'MSTRG.28296' => 'ama', 'MSTRG.9895' => 'ama', 'Nitab4.5_0000110g0060' => 'nta', 'Nitab4.5_0000420g0130' => 'nta', 'Nitab4.5_0000422g0030' => 'nta', 'Nitab4.5_0000560g0180' => 'nta', 'Nitab4.5_0000703g0100' => 'nta', 'Nitab4.5_0000786g0200' => 'nta', 'Nitab4.5_0001336g0020' => 'nta', 'Nitab4.5_0001796g0030' => 'nta', 'Nitab4.5_0003348g0060' => 'nta', 'Nitab4.5_0003698g0040' => 'nta', 'Nitab4.5_0003942g0090' => 'nta', 'Nitab4.5_0004775g0070' => 'nta', 'Nitab4.5_0004864g0030' => 'nta', 'Nitab4.5_0005615g0020' => 'nta', 'Nitab4.5_0009288g0030' => 'nta', 'Nitab4.5_0009341g0010' => 'nta', 'Nitab4.5_0009535g0010' => 'nta', 'Nn1g03995' => 'nnu', 'Nn1g04100' => 'nnu', 'Nn1g06530' => 'nnu', 'Nn3g16404' => 'nnu', 'Nn3g17212' => 'nnu', 'Nn3g20776' => 'nnu', 'Nn3g21923' => 'nnu', 'Nn5g27737' => 'nnu', 'Nn5g29461' => 'nnu', 'Nn7g38355' => 'nnu', 'Nn8g39873' => 'nnu', 'Oeu000548.2' => 'oeu', 'Oeu004672.1' => 'oeu', 'Oeu015605.2' => 'oeu', 'Oeu016092.1' => 'oeu', 'Oeu017879.3' => 'oeu', 'Oeu024910.1' => 'oeu', 'Oeu028965.1' => 'oeu', 'Oeu031269.1' => 'oeu', 'Oeu031270.1' => 'oeu', 'Oeu032535.1' => 'oeu', 'Oeu034151.1' => 'oeu', 'Oeu034152.1' => 'oeu', 'Oeu034588.2' => 'oeu', 'Oeu050846.1' => 'oeu', 'Oeu050849.2' => 'oeu', 'Oeu051063.2' => 'oeu', 'Oeu052368.1' => 'oeu', 'Oeu052370.1' => 'oeu', 'Os01g0210400' => 'osa', 'Os01g0304300' => 'osa', 'Os01g0749100' => 'osa', 'Os02g0745800' => 'osa', 'Os03g0769050' => 'osa', 'Os05g0531500' => 'osa', 'Os06g0724300' => 'osa', 'Os11g0198100' => 'osa', 'Peaxi162Scf00069g01425' => 'pax', 'Peaxi162Scf00280g00811' => 'pax', 'Peaxi162Scf00310g00615' => 'pax', 'Peaxi162Scf00362g00542' => 'pax', 'Peaxi162Scf00461g00310' => 'pax', 'Peaxi162Scf00530g00118' => 'pax', 'Peaxi162Scf00541g00057' => 'pax', 'Peaxi162Scf00661g00017' => 'pax', 'Peaxi162Scf00926g00027' => 'pax', 'Peaxi162Scf01064g00263' => 'pax', 'Peaxi162Scf01211g00135' => 'pax', 'PGR004G2336' => 'pgr', 'PGR042G0327' => 'pgr', 'PGR042G1957' => 'pgr', 'PGR042G2003' => 'pgr', 'PGR042G3929' => 'pgr', 'PGR083G1137' => 'pgr', 'PGR083G1364' => 'pgr', 'PGSC0003DMG400003381' => 'stu', 'PGSC0003DMG400003417' => 'stu', 'PGSC0003DMG400008981' => 'stu', 'PGSC0003DMG400012417' => 'stu', 'PGSC0003DMG400012823' => 'stu', 'PGSC0003DMG400016885' => 'stu', 'PGSC0003DMG400022812' => 'stu', 'PGSC0003DMG400029726' => 'stu', 'PGSC0003DMG401009243' => 'stu', 'PGSC0003DMG401031505' => 'stu', 'PGSC0003DMG402031505' => 'stu', 'Phvul.001G017600' => 'pvu', 'Phvul.002G193500' => 'pvu', 'Phvul.002G228900' => 'pvu', 'Phvul.002G236800' => 'pvu', 'Phvul.003G049500' => 'pvu', 'Phvul.005G072000' => 'pvu', 'Phvul.006G164800' => 'pvu', 'Phvul.006G185100' => 'pvu', 'Phvul.007G090000' => 'pvu', 'Potri.001G399800' => 'ptr', 'Potri.002G149900' => 'ptr', 'Potri.004G044100' => 'ptr', 'Potri.004G177600' => 'ptr', 'Potri.009G138000' => 'ptr', 'Potri.010G094000' => 'ptr', 'Potri.011G053000' => 'ptr', 'Potri.011G119300' => 'ptr', 'Potri.013G113700' => 'ptr', 'Potri.018G107800' => 'ptr', 'Potri.019G084100' => 'ptr', 'Pp3c14_23720' => 'ppa', 'Pp3c16_6340' => 'ppa', 'Pp3c23_13420' => 'ppa', 'Pp3c24_2740' => 'ppa', 'Pp3c25_860' => 'ppa', 'Pp3c8_21750' => 'ppa', 'Prupe.1G273000' => 'ppe', 'Prupe.1G273700' => 'ppe', 'Prupe.1G274100' => 'ppe', 'Prupe.2G023300' => 'ppe', 'Prupe.4G048000' => 'ppe', 'Prupe.4G080400' => 'ppe', 'Prupe.4G181200' => 'ppe', 'Prupe.8G056900' => 'ppe', 'Prupe.8G168700' => 'ppe', 'Psat1g189080' => 'psa', 'Psat1g204760' => 'psa', 'Psat4g175560' => 'psa', 'Psat4g177720' => 'psa', 'Psat5g244240' => 'psa', 'Psat6g010720' => 'psa', 'Psat6g187200' => 'psa', 'Psat7g072040' => 'psa', 'PSO017G3501' => 'pso', 'PSO063G2148' => 'pso', 'PSO063G5608' => 'pso', 'PSO210G6392' => 'pso', 'PSO541G2319' => 'pso', 'PSO541G2836' => 'pso', 'PSO541G4012' => 'pso', 'PSO541G6253' => 'pso', 'PSO675G0580' => 'pso', 'PSO675G0856' => 'pso', 'PSO675G5635' => 'pso', 'PSO675G9157' => 'pso', 'PSO832G1660' => 'pso', 'PSO832G1969' => 'pso', 'QL02p007186' => 'qlo', 'QL02p033904' => 'qlo', 'QL03p064391' => 'qlo', 'QL05p040593' => 'qlo', 'QL05p058242' => 'qlo', 'QL08p021825' => 'qlo', 'QL11p004981' => 'qlo', 'RcHm_v2.0_Chr1g0318301' => 'rch', 'RcHm_v2.0_Chr4g0418501' => 'rch', 'RcHm_v2.0_Chr4g0439971' => 'rch', 'RcHm_v2.0_Chr5g0008541' => 'rch', 'RcHm_v2.0_Chr5g0014101' => 'rch', 'RcHm_v2.0_Chr5g0014131' => 'rch', 'RcHm_v2.0_Chr5g0033621' => 'rch', 'RcHm_v2.0_Chr6g0272041' => 'rch', 'RcHm_v2.0_Chr6g0278831' => 'rch', 'Rhsim02G0130400' => 'rsi', 'Rhsim02G0171100' => 'rsi', 'Rhsim05G0053000' => 'rsi', 'Rhsim05G0053100' => 'rsi', 'Rhsim06G0096500' => 'rsi', 'Rhsim06G0096600' => 'rsi', 'Rhsim06G0199100' => 'rsi', 'Rhsim12G0062300' => 'rsi', 'Rhsim12G0062800' => 'rsi', 'Sabra02G0118600' => 'sbr', 'Sabra04G0027300' => 'sbr', 'Sabra04G0119500' => 'sbr', 'Sabra08G0112500' => 'sbr', 'Sabra11G0036800' => 'sbr', 'Sabra11G0103800' => 'sbr', 'Sabra13G0096300' => 'sbr', 'Sabra16G0262300' => 'sbr', 'Sabra18G0091700' => 'sbr', 'Sabra19G0095400' => 'sbr', 'SalBow6G3080' => 'sbo', 'SalBow7G1157' => 'sbo', 'SalBow7G2123' => 'sbo', 'SalBow7G2285' => 'sbo', 'SalBow7G3537' => 'sbo', 'SalBow8G2947' => 'sbo', 'SalBow8G4463' => 'sbo', 'SalBow8G5466' => 'sbo', 'Sc01g0001750' => 'sci', 'Sc02g0006640' => 'sci', 'Sc02g0006670' => 'sci', 'Sc04g0008220' => 'sci', 'Sc05g0006190' => 'sci', 'Sc08g0002760' => 'sci', 'Sc17g0006170' => 'sci', 'Sc22g0002050' => 'sci', 'Sc23g0001190' => 'sci', 'Sc24g0000980' => 'sci', 'Sed0006245' => 'sed', 'Sed0007543' => 'sed', 'Sed0009411' => 'sed', 'Sed0010765' => 'sed', 'Sed0012944' => 'sed', 'Sed0014682' => 'sed', 'Sed0016174' => 'sed', 'Sed0016796' => 'sed', 'Sed0020317' => 'sed', 'Sed0021467' => 'sed', 'SEGI_01316' => 'sgi', 'SEGI_03374' => 'sgi', 'SEGI_16265' => 'sgi', 'SEGI_18569' => 'sgi', 'SEGI_20351' => 'sgi', 'SEGI_26395' => 'sgi', 'SEGI_29469' => 'sgi', 'SEGI_34771' => 'sgi', 'SEGI_36769' => 'sgi', 'SEGI_37139' => 'sgi', 'SGA_v2.0_scaffold100G29687' => 'sas', 'SGA_v2.0_scaffold118G32472' => 'sas', 'SGA_v2.0_scaffold14G07051' => 'sas', 'SGA_v2.0_scaffold183G39845' => 'sas', 'SGA_v2.0_scaffold1G00174' => 'sas', 'SGA_v2.0_scaffold22G09714' => 'sas', 'SGA_v2.0_scaffold333G48992' => 'sas', 'SGA_v2.0_scaffold46G17491' => 'sas', 'SGA_v2.0_scaffold49G18294' => 'sas', 'SGA_v2.0_scaffold63G21658' => 'sas', 'SHI01741' => 'shi', 'SHI05771' => 'shi', 'SHI18077' => 'shi', 'SHI20525' => 'shi', 'SHI20527' => 'shi', 'SHI20528' => 'shi', 'SMO172G0185' => 'smo', 'SMO198G0020' => 'smo', 'SMO351G0006' => 'smo', 'SMO356G0118' => 'smo', 'SMO358G0296' => 'smo', 'SMO367G0079' => 'smo', 'SMO367G1277' => 'smo', 'Solyc01g014220.3' => 'sly', 'Solyc01g111770.2' => 'sly', 'Solyc02g078180.3' => 'sly', 'Solyc03g006430.3' => 'sly', 'Solyc03g006456.1' => 'sly', 'Solyc03g079860.2' => 'sly', 'Solyc04g079770.3' => 'sly', 'Solyc05g007430.4' => 'sly', 'Solyc07g063150.3' => 'sly', 'Solyc08g016620.3' => 'sly', 'Solyc09g057590.3' => 'sly', 'Solyc09g057600.1' => 'sly', 'Solyc10g009050.3' => 'sly', 'Solyc11g017420.2' => 'sly', 'Sopen01g053810' => 'spe', 'Sopen02g023040' => 'spe', 'Sopen03g002440' => 'spe', 'Sopen04g033350' => 'spe', 'Sopen05g003310' => 'spe', 'Sopen07g004050' => 'spe', 'Sopen07g031340' => 'spe', 'Sopen08g006990' => 'spe', 'Sopen10g004830' => 'spe', 'Sopen11g009370' => 'spe', 'Sp1g24450' => 'spa', 'Sp1g29670' => 'spa', 'Sp1g39600' => 'spa', 'Sp2g11080' => 'spa', 'Sp2g13970' => 'spa', 'Sp4g16130' => 'spa', 'Sp6g13080' => 'spa', 'Sp7g37270' => 'spa', 'TAR371G0065' => 'tar', 'TAR376G0340' => 'tar', 'TAR376G0435' => 'tar', 'TAR381G0002' => 'tar', 'TAR381G1236' => 'tar', 'TAR624G0055' => 'tar', 'TAR624G0324' => 'tar', 'TAR624G0696' => 'tar', 'TAR624G0906' => 'tar', 'TAR625G0107' => 'tar', 'TAR626G0015' => 'tar', 'TAR626G1356' => 'tar', 'TAR627G0888' => 'tar', 'TAR628G0399' => 'tar', 'TAR628G1327' => 'tar', 'TAR629G2831' => 'tar', 'TAR629G2874' => 'tar', 'TAR633G1432' => 'tar', 'TAR633G2771' => 'tar', 'THA.LOC104803394' => 'tha', 'THA.LOC104805153' => 'tha', 'THA.LOC104806784' => 'tha', 'THA.LOC104810473' => 'tha', 'THA.LOC104813100' => 'tha', 'THA.LOC104814215' => 'tha', 'THA.LOC104815554' => 'tha', 'THA.LOC104820544' => 'tha', 'THA.LOC104824754' => 'tha', 'THA.LOC104827717' => 'tha', 'Thecc.02G031400' => 'tca', 'Thecc.02G055900' => 'tca', 'Thecc.02G350800' => 'tca', 'Thecc.06G150900' => 'tca', 'Thecc.06G186600' => 'tca', 'Thecc.07G089600' => 'tca', 'Thecc.08G020400' => 'tca', 'Thecc.08G182100' => 'tca', 'Thhalv10000873m.g' => 'esa', 'Thhalv10004185m.g' => 'esa', 'Thhalv10006981m.g' => 'esa', 'Thhalv10007204m.g' => 'esa', 'Thhalv10011374m.g' => 'esa', 'Thhalv10013482m.g' => 'esa', 'Thhalv10017801m.g' => 'esa', 'Thhalv10024983m.g' => 'esa', 'TPR.G12072' => 'tpr', 'TPR.G15769' => 'tpr', 'TPR.G16504' => 'tpr', 'TPR.G16506' => 'tpr', 'TPR.G24345' => 'tpr', 'TPR.G26666' => 'tpr', 'TPR.G27320' => 'tpr', 'TPR.G31819' => 'tpr', 'TPR.G38879' => 'tpr', 'TPR.G39015' => 'tpr', 'TPR.G8819' => 'tpr', 'TWI09G0924' => 'twi', 'TWI12G0811' => 'twi', 'TWI12G1294' => 'twi', 'TWI31G0150' => 'twi', 'TWI36G1262' => 'twi', 'TWI38G1287' => 'twi', 'TWI38G1633' => 'twi', 'TWI38G1982' => 'twi', 'TWI39G0116' => 'twi', 'TWI60G1011' => 'twi', 'TWI63G0171' => 'twi', 'TWI73G0839' => 'twi', 'TWI79G1511' => 'twi', 'unitig_0.g915' => 'ugi', 'unitig_0.g916' => 'ugi', 'unitig_21.g20219' => 'ugi', 'unitig_21.g20416' => 'ugi', 'unitig_578.g16132' => 'ugi', 'unitig_578.g16718' => 'ugi', 'unitig_62.g23481' => 'ugi', 'unitig_744.g24535' => 'ugi', 'unitig_749.g13525' => 'ugi', 'vmacro01248' => 'vma', 'vmacro02290' => 'vma', 'vmacro10946' => 'vma', 'vmacro11865' => 'vma', 'vmacro12493' => 'vma', 'vmacro17322' => 'vma', 'vmacro21599' => 'vma', 'vmacro23041' => 'vma', 'VMungo0251G0004' => 'vmu', 'VMungo0251G2639' => 'vmu', 'VMungo0251G2967' => 'vmu', 'VMungo0540G0864' => 'vmu', 'VMungo0540G1569' => 'vmu', 'VMungo0647G0317' => 'vmu', 'VMungo0720G1373' => 'vmu', 'VMungo0720G1508' => 'vmu', 'VMungo1080G0485' => 'vmu', 'VMungo1215G3177' => 'vmu', 'Zm00001eb112600' => 'zma', 'Zm00001eb120220' => 'zma', 'Zm00001eb153240' => 'zma', 'Zm00001eb168880' => 'zma', 'Zm00001eb213920' => 'zma', 'Zm00001eb228280' => 'zma', 'Zm00001eb254580' => 'zma', 'Zm00001eb272180' => 'zma', 'Zm00001eb293190' => 'zma', 'Zm00001eb322930' => 'zma', 'Zm00001eb353360' => 'zma', 'Zm00001eb353390' => 'zma', 'Zm00001eb353430' => 'zma', 'Zm00001eb353440' => 'zma', 'Zm00001eb353780' => 'zma' ), 'gf_id' => 'HOM05D000499', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000499' ), 'data_identifier' => 'HOM05D000499', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000499', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1066', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p29780' => 'bna', 'A02p33180' => 'bna', 'A03p16470' => 'bna', 'A03p66010' => 'bna', 'A04p25970' => 'bna', 'A06p01270' => 'bna', 'A06p46080' => 'bna', 'A07p11400' => 'bna', 'A08p01840' => 'bna', 'A08p08230' => 'bna', 'A08p25740' => 'bna', 'A09p32070' => 'bna', 'A09p37830' => 'bna', 'A09p42840' => 'bna', 'A09p42850' => 'bna', 'Aa31LG10G2060' => 'aar', 'Aa31LG2G7410' => 'aar', 'Aa31LG6G10200' => 'aar', 'Aa31LG6G16680' => 'aar', 'Aa31LG6G8470' => 'aar', 'Aa31LG9G12730' => 'aar', 'Aa31LG9G13680' => 'aar', 'Aa31LG9G14920' => 'aar', 'Aa31LG9G6650' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4977' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5467' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3254' => 'aag', 'Actinidia02578' => 'ach', 'Actinidia07693' => 'ach', 'Actinidia08413' => 'ach', 'Actinidia08414' => 'ach', 'Actinidia15289' => 'ach', 'Actinidia19871' => 'ach', 'Actinidia21475' => 'ach', 'Actinidia22576' => 'ach', 'Actinidia28327' => 'ach', 'Actinidia32491' => 'ach', 'Actinidia39463' => 'ach', 'Actinidia39571' => 'ach', 'Ah.01g013750' => 'amhyb', 'Ah.01g023210' => 'amhyb', 'Ah.04g164850' => 'amhyb', 'Ah.05g178060' => 'amhyb', 'Ah.07g204270' => 'amhyb', 'Ah.07g208480' => 'amhyb', 'Ah.09g237410' => 'amhyb', 'Ah.14g089460' => 'amhyb', 'AL1G41790' => 'aly', 'AL1G49050' => 'aly', 'AL1G53810' => 'aly', 'AL1G61400' => 'aly', 'AL4G18580' => 'aly', 'AL5G12510' => 'aly', 'AL5G12540' => 'aly', 'AL6G43230' => 'aly', 'AL7G10370' => 'aly', 'AL7G19250' => 'aly', 'AL8G12240' => 'aly', 'AL8G18540' => 'aly', 'Aqoxy1G02409' => 'aox', 'Aqoxy2G03993' => 'aox', 'Aqoxy3G03357' => 'aox', 'Aqoxy4G00785' => 'aox', 'Aqoxy5G02598' => 'aox', 'Aqoxy6G00132' => 'aox', 'Aqoxy7G01776' => 'aox', 'Aqoxy7G02316' => 'aox', 'Aqoxy7G03973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.12AFKW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B8730' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27IQR1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3F75VG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3RE0GA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41TCQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.527VTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FIR39' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5W8UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DA38EV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ63HS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H1I32C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HC27T5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4M8AP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7N3CZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9UVDZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LS1NQA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT1D4B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SKC4TM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCFV76' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF9Q1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQWD9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1ZM88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WE07RT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YCK7VH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJE6Q6' => 'arhy', 'AT1G28240' => 'ath', 'AT1G34550' => 'ath', 'AT1G53040' => 'ath', 'AT2G02910' => 'ath', 'AT4G09630' => 'ath', 'AT4G38500' => 'ath', 'AT5G42660' => 'ath', 'AT5G46220' => 'ath', 'ATR0152G026' => 'atr', 'ATR0564G343' => 'atr', 'ATR0706G151' => 'atr', 'ATR0733G207' => 'atr', 'ATR0751G234' => 'atr', 'ATR0807G048' => 'atr', 'ATR1091G084' => 'atr', 'Atru.chr10.1229' => 'acertr', 'Atru.chr10.1230' => 'acertr', 'Atru.chr10.1874' => 'acertr', 'Atru.chr11.1808' => 'acertr', 'Atru.chr13.1795' => 'acertr', 'Atru.chr13.570' => 'acertr', 'Atru.chr2.2608' => 'acertr', 'Atru.chr2.2609' => 'acertr', 'Atru.chr5.3428' => 'acertr', 'Atru.chr8.1171' => 'acertr', 'AUR62004651' => 'cqu', 'AUR62008675' => 'cqu', 'AUR62010014' => 'cqu', 'AUR62013004' => 'cqu', 'AUR62014825' => 'cqu', 'AUR62015015' => 'cqu', 'AUR62015151' => 'cqu', 'AUR62017020' => 'cqu', 'AUR62019422' => 'cqu', 'AUR62023570' => 'cqu', 'AUR62025571' => 'cqu', 'AUR62029098' => 'cqu', 'AUR62033863' => 'cqu', 'AUR62034296' => 'cqu', 'AUR62040075' => 'cqu', 'BcaB02g07334' => 'bca', 'BcaB02g10575' => 'bca', 'BcaB03g12119' => 'bca', 'BcaB03g12120' => 'bca', 'BcaB03g13945' => 'bca', 'BcaB04g17123' => 'bca', 'BcaB04g17867' => 'bca', 'BcaB04g19839' => 'bca', 'BcaB07g30317' => 'bca', 'BcaB07g32432' => 'bca', 'BcaB07g33362' => 'bca', 'BcaB08g36611' => 'bca', 'BcaC01g00028' => 'bca', 'BcaC01g01356' => 'bca', 'BcaC01g02034' => 'bca', 'BcaC01g06051' => 'bca', 'BcaC03g16839' => 'bca', 'BcaC03g17176' => 'bca', 'BcaC05g26829' => 'bca', 'BcaC06g31490' => 'bca', 'BcaC06g35344' => 'bca', 'BcaC06g36570' => 'bca', 'BcaC07g37537' => 'bca', 'BcaC08g43491' => 'bca', 'BcaC08g43773' => 'bca', 'BcaNung00234' => 'bca', 'BcaNung01982' => 'bca', 'BcaNung03707' => 'bca', 'BcaNung06454' => 'bca', 'BolC2t10762H' => 'bol', 'BolC2t11191H' => 'bol', 'BolC3t14322H' => 'bol', 'BolC3t19747H' => 'bol', 'BolC3t21425H' => 'bol', 'BolC4t27800H' => 'bol', 'BolC5t31423H' => 'bol', 'BolC6t35951H' => 'bol', 'BolC6t36282H' => 'bol', 'BolC7t40678H' => 'bol', 'BolC7t40679H' => 'bol', 'BolC7t42222H' => 'bol', 'BolC7t43492H' => 'bol', 'BolC7t46785H' => 'bol', 'BolC8t47853H' => 'bol', 'BolC9t56805H' => 'bol', 'BraA02t08000Z' => 'bra', 'BraA02t08341Z' => 'bra', 'BraA03t10936Z' => 'bra', 'BraA03t15657Z' => 'bra', 'BraA04t18100Z' => 'bra', 'BraA05t20523Z' => 'bra', 'BraA06t23353Z' => 'bra', 'BraA06t27473Z' => 'bra', 'BraA06t27769Z' => 'bra', 'BraA07t28928Z' => 'bra', 'BraA08t32236Z' => 'bra', 'BraA08t32841Z' => 'bra', 'BraA08t34524Z' => 'bra', 'BraA09t38742Z' => 'bra', 'BraA09t39295Z' => 'bra', 'C02p47180' => 'bna', 'C02p50990' => 'bna', 'C03p19360' => 'bna', 'C03p74950' => 'bna', 'C03p91000' => 'bna', 'C04p63260' => 'bna', 'C05p27050' => 'bna', 'C06p08750' => 'bna', 'C06p11490' => 'bna', 'C07p02820' => 'bna', 'C07p17180' => 'bna', 'C07p29440' => 'bna', 'C07p63730' => 'bna', 'C09p39260' => 'bna', 'CAN.G1164.34' => 'can', 'CAN.G1164.39' => 'can', 'CAN.G1530.3' => 'can', 'CAN.G162.61' => 'can', 'CAN.G176.6' => 'can', 'CAN.G289.49' => 'can', 'CAN.G370.21' => 'can', 'CAN.G370.22' => 'can', 'CAN.G371.117' => 'can', 'CAN.G58.37' => 'can', 'CAN.G588.98' => 'can', 'CANSAT21G2266' => 'cansat', 'CANSAT25G2799' => 'cansat', 'CANSAT35G0862' => 'cansat', 'CANSAT35G1704' => 'cansat', 'CANSAT35G1760' => 'cansat', 'CANSAT56G3971' => 'cansat', 'CANSAT56G4116' => 'cansat', 'CANSAT80G1259' => 'cansat', 'CARHR027730' => 'chi', 'CARHR033880' => 'chi', 'CARHR043270' => 'chi', 'CARHR145330' => 'chi', 'CARHR145340' => 'chi', 'CARHR175570' => 'chi', 'CARHR181570' => 'chi', 'CARHR258470' => 'chi', 'CARHR260490' => 'chi', 'CARHR294220' => 'chi', 'Carub.0001s2668' => 'cru', 'Carub.0001s3257' => 'cru', 'Carub.0001s4220' => 'cru', 'Carub.0005s0179' => 'cru', 'Carub.0006s2807' => 'cru', 'Carub.0007s0039' => 'cru', 'Carub.0008s0169' => 'cru', 'Carub.0008s0636' => 'cru', 'Ca_00338_v3' => 'car', 'Ca_00542_v3' => 'car', 'Ca_01844_v3' => 'car', 'Ca_10611_v3' => 'car', 'Ca_13326_v3' => 'car', 'Ca_17944_v3' => 'car', 'Ca_18546_v3' => 'car', 'Ca_24219_v3' => 'car', 'Ca_29972_v3' => 'car', 'CBR_g3681' => 'cbr', 'CBR_g40021' => 'cbr', 'Cc01_g08140' => 'ccan', 'Cc02_g13410' => 'ccan', 'Cc02_g37480' => 'ccan', 'Cc05_g12030' => 'ccan', 'Cc09_g03370' => 'ccan', 'Cc09_g10300' => 'ccan', 'Cc10_g03530' => 'ccan', 'Cc10_g11380' => 'ccan', 'CDE01G0176' => 'cde', 'CDE02G0675' => 'cde', 'CDE02G0942' => 'cde', 'CDE02G1153' => 'cde', 'CDE02G4177' => 'cde', 'CDE04G2117' => 'cde', 'CDE04G2736' => 'cde', 'CDE08G1161' => 'cde', 'CDE09G1238' => 'cde', 'Cfa000467' => 'cfa', 'Cfa000947' => 'cfa', 'Cfa004969' => 'cfa', 'Cfa005284' => 'cfa', 'Cfa008993' => 'cfa', 'Cfa018187' => 'cfa', 'Cfa018454' => 'cfa', 'Cfa020585' => 'cfa', 'Ciclev10000424m.g' => 'ccl', 'Ciclev10003605m.g' => 'ccl', 'Ciclev10007828m.g' => 'ccl', 'Ciclev10014620m.g' => 'ccl', 'Ciclev10015169m.g' => 'ccl', 'Ciclev10018291m.g' => 'ccl', 'Ciclev10028256m.g' => 'ccl', 'Ciclev10033822m.g' => 'ccl', 'CiPaw.05G060300' => 'cil', 'CiPaw.05G085000' => 'cil', 'CiPaw.06G083700' => 'cil', 'CiPaw.06G120300' => 'cil', 'CiPaw.09G060500' => 'cil', 'CiPaw.09G123800' => 'cil', 'CiPaw.11G169700' => 'cil', 'CiPaw.12G118300' => 'cil', 'CiPaw.15G071000' => 'cil', 'CiPaw.15G081900' => 'cil', 'ClCG01G024610' => 'cla', 'ClCG03G006070' => 'cla', 'ClCG05G019250' => 'cla', 'ClCG09G009500' => 'cla', 'ClCG11G008200' => 'cla', 'ClCG11G018080' => 'cla', 'COL.COLO4_17373' => 'col', 'COL.COLO4_22994' => 'col', 'COL.COLO4_26389' => 'col', 'COL.COLO4_27170' => 'col', 'COL.COLO4_31074' => 'col', 'COL.COLO4_31465' => 'col', 'COL.COLO4_36438' => 'col', 'COL.COLO4_36439' => 'col', 'Cpa.g.c38781' => 'cpa', 'Cpa.g.sc128.12' => 'cpa', 'Cpa.g.sc166.7' => 'cpa', 'Cpa.g.sc166.8' => 'cpa', 'Cpa.g.sc20.111' => 'cpa', 'Cpa.g.sc27.31' => 'cpa', 'Cpa.g.sc64.36' => 'cpa', 'Cpa.g.sc64.37' => 'cpa', 'Cpa.g.sc66.49' => 'cpa', 'Cpa.g.sc80.64' => 'cpa', 'CsaV3_1G012320' => 'csa', 'CsaV3_2G008480' => 'csa', 'CsaV3_2G033450' => 'csa', 'CsaV3_3G044830' => 'csa', 'CsaV3_4G033710' => 'csa', 'CsaV3_6G051730' => 'csa', 'CsaV3_7G025350' => 'csa', 'CSS0001067' => 'camsi', 'CSS0005996' => 'camsi', 'CSS0006590' => 'camsi', 'CSS0009673' => 'camsi', 'CSS0010201' => 'camsi', 'CSS0010549' => 'camsi', 'CSS0011364' => 'camsi', 'CSS0014473' => 'camsi', 'CSS0014961' => 'camsi', 'CSS0020191' => 'camsi', 'CSS0021165' => 'camsi', 'CSS0022306' => 'camsi', 'CSS0030591' => 'camsi', 'CSS0030696' => 'camsi', 'CSS0032653' => 'camsi', 'CSS0037487' => 'camsi', 'CSS0041102' => 'camsi', 'CSS0041261' => 'camsi', 'CSS0046246' => 'camsi', 'CSS0049256' => 'camsi', 'DCAR_004075' => 'dca', 'DCAR_011538' => 'dca', 'DCAR_019553' => 'dca', 'DCAR_020952' => 'dca', 'DCAR_021739' => 'dca', 'DCAR_027407' => 'dca', 'DCAR_027913' => 'dca', 'DCAR_028066' => 'dca', 'Dinv05899' => 'din', 'Dinv07563' => 'din', 'Dinv08010' => 'din', 'Dinv14125' => 'din', 'Dinv20172' => 'din', 'Dinv30743' => 'din', 'Dinv31229' => 'din', 'Dinv34162' => 'din', 'Dinv36028' => 'din', 'Dinv39368' => 'din', 'Dinv40565' => 'din', 'Dinv41706' => 'din', 'Duzib052G0089' => 'dzi', 'Duzib116G0641' => 'dzi', 'Duzib132G0069' => 'dzi', 'Duzib132G1219' => 'dzi', 'Duzib147G0278' => 'dzi', 'Duzib160G0480' => 'dzi', 'Duzib170G0661' => 'dzi', 'Duzib177G0591' => 'dzi', 'Duzib187G1353' => 'dzi', 'Duzib192G0858' => 'dzi', 'Duzib192G0883' => 'dzi', 'Duzib213G0506' => 'dzi', 'Duzib235G0289' => 'dzi', 'Duzib251G0422' => 'dzi', 'ECA232G3898' => 'eca', 'ECA233G5950' => 'eca', 'ECA234G1699' => 'eca', 'ECA234G2421' => 'eca', 'ECA236G0426' => 'eca', 'ECA236G4331' => 'eca', 'ECA248G2573' => 'eca', 'EL10Ac1g00077' => 'bvu', 'EL10Ac1g01746' => 'bvu', 'EL10Ac2g03464' => 'bvu', 'EL10Ac4g08176' => 'bvu', 'EL10Ac7g17521' => 'bvu', 'EL10Ac8g20386' => 'bvu', 'EL10Ac9g21343' => 'bvu', 'EL10Ac9g22688' => 'bvu', 'Eucgr.B03434' => 'egr', 'Eucgr.D00618' => 'egr', 'Eucgr.E02395' => 'egr', 'Eucgr.F01129' => 'egr', 'Eucgr.F02622' => 'egr', 'Eucgr.F04207' => 'egr', 'FAN01G0570' => 'fan', 'FAN03G3351' => 'fan', 'FAN06G3702' => 'fan', 'FAN07G2149' => 'fan', 'FAN10G3758' => 'fan', 'FAN11G1170' => 'fan', 'FAN11G2050' => 'fan', 'FAN11G2724' => 'fan', 'FAN12G1700' => 'fan', 'FAN12G2028' => 'fan', 'FAN15G1160' => 'fan', 'FAN15G3063' => 'fan', 'FAN16G2540' => 'fan', 'FAN16G3077' => 'fan', 'FAN16G3624' => 'fan', 'FAN17G0221' => 'fan', 'FAN20G2492' => 'fan', 'FAN20G2905' => 'fan', 'FAN21G0548' => 'fan', 'FAN21G1300' => 'fan', 'FAN22G0077' => 'fan', 'FAN22G1315' => 'fan', 'FAN24G1280' => 'fan', 'FAN24G1445' => 'fan', 'FAN24G3527' => 'fan', 'FAN25G0464' => 'fan', 'FAN25G2885' => 'fan', 'FAN25G3270' => 'fan', 'FAN27G1101' => 'fan', 'FAN27G2846' => 'fan', 'FAN27G3524' => 'fan', 'FvH4_2g11770' => 'fve', 'FvH4_2g15630' => 'fve', 'FvH4_3g05570' => 'fve', 'FvH4_3g09110' => 'fve', 'FvH4_3g19940' => 'fve', 'FvH4_4g04821' => 'fve', 'FvH4_4g31480' => 'fve', 'FvH4_7g01740' => 'fve', 'Glyma.05G130400' => 'gma', 'Glyma.05G156400' => 'gma', 'Glyma.07G197000' => 'gma', 'Glyma.08G085151' => 'gma', 'Glyma.08G114500' => 'gma', 'Glyma.08G300400' => 'gma', 'Glyma.10G215800' => 'gma', 'Glyma.12G224400' => 'gma', 'Glyma.13G179300' => 'gma', 'Glyma.13G218151' => 'gma', 'Glyma.13G238800' => 'gma', 'Glyma.13G276900' => 'gma', 'Glyma.14G078200' => 'gma', 'Glyma.15G074500' => 'gma', 'Glyma.15G094100' => 'gma', 'Glyma.17G247200' => 'gma', 'Glyma.18G120100' => 'gma', 'Glyma.20G176000' => 'gma', 'Gohir.A01G063600' => 'ghi', 'Gohir.A01G170301' => 'ghi', 'Gohir.A02G060500' => 'ghi', 'Gohir.A05G133850' => 'ghi', 'Gohir.A05G161400' => 'ghi', 'Gohir.A06G012900' => 'ghi', 'Gohir.A06G035901' => 'ghi', 'Gohir.A06G127100' => 'ghi', 'Gohir.A06G210500' => 'ghi', 'Gohir.A08G008650' => 'ghi', 'Gohir.A09G072700' => 'ghi', 'Gohir.A09G088301' => 'ghi', 'Gohir.A10G040600' => 'ghi', 'Gohir.A12G036300' => 'ghi', 'Gohir.A12G143350' => 'ghi', 'Gohir.A12G165500' => 'ghi', 'Gohir.A13G145700' => 'ghi', 'Gohir.D01G050000' => 'ghi', 'Gohir.D01G051366' => 'ghi', 'Gohir.D01G161350' => 'ghi', 'Gohir.D02G065900' => 'ghi', 'Gohir.D05G164200' => 'ghi', 'Gohir.D05G355500' => 'ghi', 'Gohir.D06G010400' => 'ghi', 'Gohir.D06G111250' => 'ghi', 'Gohir.D06G132000' => 'ghi', 'Gohir.D06G210500' => 'ghi', 'Gohir.D07G165675' => 'ghi', 'Gohir.D08G062240' => 'ghi', 'Gohir.D08G086101' => 'ghi', 'Gohir.D08G138060' => 'ghi', 'Gohir.D09G072300' => 'ghi', 'Gohir.D10G041400' => 'ghi', 'Gohir.D11G191020' => 'ghi', 'Gohir.D11G212066' => 'ghi', 'Gohir.D12G036300' => 'ghi', 'Gohir.D12G168600' => 'ghi', 'Gohir.D13G150600' => 'ghi', 'Gorai.001G057300' => 'gra', 'Gorai.002G069900' => 'gra', 'Gorai.002G200000' => 'gra', 'Gorai.003G067600' => 'gra', 'Gorai.005G074800' => 'gra', 'Gorai.006G087300' => 'gra', 'Gorai.008G037500' => 'gra', 'Gorai.008G181400' => 'gra', 'Gorai.009G169400' => 'gra', 'Gorai.009G387900' => 'gra', 'Gorai.010G013300' => 'gra', 'Gorai.010G153800' => 'gra', 'Gorai.010G255800' => 'gra', 'Gorai.011G043700' => 'gra', 'Gorai.011G198900' => 'gra', 'Gorai.013G168400' => 'gra', 'GSVIVG01005212001' => 'vvi', 'GSVIVG01006163001' => 'vvi', 'GSVIVG01009625001' => 'vvi', 'GSVIVG01014338001' => 'vvi', 'GSVIVG01020005001' => 'vvi', 'GSVIVG01021450001' => 'vvi', 'GSVIVG01023975001' => 'vvi', 'GSVIVG01034490001' => 'vvi', 'HanXRQChr04g0112071' => 'han', 'HanXRQChr05g0131151' => 'han', 'HanXRQChr09g0262371' => 'han', 'HanXRQChr09g0268401' => 'han', 'HanXRQChr10g0279241' => 'han', 'HanXRQChr10g0297961' => 'han', 'HanXRQChr11g0326231' => 'han', 'HanXRQChr11g0328471' => 'han', 'HanXRQChr16g0507941' => 'han', 'HanXRQChr17g0560211' => 'han', 'Haze_02108' => 'cav', 'Haze_02428' => 'cav', 'Haze_05593' => 'cav', 'Haze_06448' => 'cav', 'Haze_09427' => 'cav', 'Haze_12022' => 'cav', 'Haze_17612' => 'cav', 'Haze_17928' => 'cav', 'Hma1.2p1_0032F.1_g019250' => 'hma', 'Hma1.2p1_0163F.1_g072690' => 'hma', 'Hma1.2p1_0265F.1_g106710' => 'hma', 'Hma1.2p1_0286F.1_g113970' => 'hma', 'Hma1.2p1_0363F.1_g136640' => 'hma', 'Hma1.2p1_0584F.1_g183470' => 'hma', 'Hma1.2p1_0885F.1_g232570' => 'hma', 'HPP92_006022' => 'vpl', 'HPP92_007320' => 'vpl', 'HPP92_011521' => 'vpl', 'HPP92_019387' => 'vpl', 'HPP92_024038' => 'vpl', 'Hund05891' => 'sun', 'Hund06450' => 'sun', 'Hund12053' => 'sun', 'Hund16800' => 'sun', 'Hund21222' => 'sun', 'Hund22896' => 'sun', 'Hund23746' => 'sun', 'Hund27083' => 'sun', 'Lalb_Chr02g0141831' => 'lal', 'Lalb_Chr02g0141841' => 'lal', 'Lalb_Chr05g0220411' => 'lal', 'Lalb_Chr06g0162081' => 'lal', 'Lalb_Chr09g0327651' => 'lal', 'Lalb_Chr13g0295051' => 'lal', 'Lalb_Chr15g0086801' => 'lal', 'Lalb_Chr16g0383781' => 'lal', 'Lalb_Chr16g0383791' => 'lal', 'Lalb_Chr18g0055441' => 'lal', 'Lalb_Chr18g0059611' => 'lal', 'Lalb_Chr20g0109661' => 'lal', 'Lalb_Chr20g0109831' => 'lal', 'Lalb_Chr20g0121871' => 'lal', 'Lalb_Chr22g0355361' => 'lal', 'Lalb_Chr25g0286371' => 'lal', 'Lj1A1187G43' => 'lonja', 'Lj1A1205T50' => 'lonja', 'Lj1A800G33' => 'lonja', 'Lj1C1187T7' => 'lonja', 'Lj1C843T11' => 'lonja', 'Lj1g0010940' => 'lja', 'Lj2A288T69' => 'lonja', 'Lj3g0024276' => 'lja', 'Lj4A47T76' => 'lonja', 'Lj4g0005805' => 'lja', 'Lj4g0006097' => 'lja', 'Lj4g0008528' => 'lja', 'Lj4g0024907' => 'lja', 'Lj5g0012472' => 'lja', 'Lj5g0018648' => 'lja', 'Lj6C789G1' => 'lonja', 'Lj6g0004000' => 'lja', 'Lj7A292G67' => 'lonja', 'Lj7A292T64' => 'lonja', 'Lj9A400T58' => 'lonja', 'Lsat_1_v5_gn_1_126181' => 'lsa', 'Lsat_1_v5_gn_4_123041' => 'lsa', 'Lsat_1_v5_gn_4_133620' => 'lsa', 'Lsat_1_v5_gn_4_53221' => 'lsa', 'Lsat_1_v5_gn_4_71961' => 'lsa', 'Lsat_1_v5_gn_7_105241' => 'lsa', 'Lsat_1_v5_gn_7_21361' => 'lsa', 'Lsat_1_v5_gn_7_28860' => 'lsa', 'Lsat_1_v5_gn_7_31260' => 'lsa', 'Lsat_1_v5_gn_8_52801' => 'lsa', 'Manes.02G191400' => 'mes', 'Manes.03G110100' => 'mes', 'Manes.04G071100' => 'mes', 'Manes.05G100500' => 'mes', 'Manes.05G164700' => 'mes', 'Manes.15G087000' => 'mes', 'Manes.15G121500' => 'mes', 'Manes.16G028300' => 'mes', 'Manes.17G046100' => 'mes', 'Manes.17G069800' => 'mes', 'Manes.18G100500' => 'mes', 'Mapoly0002s0109' => 'mpo', 'Mapoly0024s0007' => 'mpo', 'Mapoly0089s0032' => 'mpo', 'MBI04_g42241_MAGBIO' => 'mbi', 'MBI05_g11988_MAGBIO' => 'mbi', 'MBI05_g35452_MAGBIO' => 'mbi', 'MBI07_g30179_MAGBIO' => 'mbi', 'MBI07_g35859_MAGBIO' => 'mbi', 'MBI07_g35860_MAGBIO' => 'mbi', 'MBI07_g37166_MAGBIO' => 'mbi', 'MBI08_g18172_MAGBIO' => 'mbi', 'MBI09_g08441_MAGBIO' => 'mbi', 'MBI13_g01676_MAGBIO' => 'mbi', 'MBI14_g42955_MAGBIO' => 'mbi', 'MBI16_g13161_MAGBIO' => 'mbi', 'MBI17_g27204_MAGBIO' => 'mbi', 'MBI19_g21595_MAGBIO' => 'mbi', 'MD00G1148400' => 'mdo', 'MD02G1301200' => 'mdo', 'MD03G1227800' => 'mdo', 'MD05G1041100' => 'mdo', 'MD05G1124800' => 'mdo', 'MD05G1284000' => 'mdo', 'MD05G1338800' => 'mdo', 'MD05G1338900' => 'mdo', 'MD07G1022800' => 'mdo', 'MD10G1047500' => 'mdo', 'MD10G1127500' => 'mdo', 'MD10G1262300' => 'mdo', 'MD10G1293800' => 'mdo', 'MD16G1074300' => 'mdo', 'Medtr1g021670' => 'mtr', 'Medtr1g096320' => 'mtr', 'Medtr2g013690' => 'mtr', 'Medtr2g019450' => 'mtr', 'Medtr2g085170' => 'mtr', 'Medtr4g088785' => 'mtr', 'Medtr8g055930' => 'mtr', 'Medtr8g085850' => 'mtr', 'MELO3C002605.2' => 'cme', 'MELO3C003891.2' => 'cme', 'MELO3C004012.2' => 'cme', 'MELO3C007134.2' => 'cme', 'MELO3C008118.2' => 'cme', 'MELO3C016700.2' => 'cme', 'MELO3C024127.2' => 'cme', 'MELO3C033361.2' => 'cme', 'MELO3C033362.2' => 'cme', 'Migut.C00430' => 'egut', 'Migut.C01246' => 'egut', 'Migut.E00101' => 'egut', 'Migut.H01486' => 'egut', 'Migut.H01939' => 'egut', 'Migut.K00360' => 'egut', 'Migut.M00910' => 'egut', 'Migut.M01139' => 'egut', 'Migut.N02677' => 'egut', 'MSTRG.13252' => 'ama', 'MSTRG.14701' => 'ama', 'MSTRG.1521' => 'ama', 'MSTRG.15884' => 'ama', 'MSTRG.16242' => 'ama', 'MSTRG.22285' => 'ama', 'MSTRG.22444' => 'ama', 'MSTRG.2349' => 'ama', 'MSTRG.26308' => 'ama', 'MSTRG.28296' => 'ama', 'MSTRG.9895' => 'ama', 'Nitab4.5_0000110g0060' => 'nta', 'Nitab4.5_0000420g0130' => 'nta', 'Nitab4.5_0000422g0030' => 'nta', 'Nitab4.5_0000560g0180' => 'nta', 'Nitab4.5_0000703g0100' => 'nta', 'Nitab4.5_0000786g0200' => 'nta', 'Nitab4.5_0001336g0020' => 'nta', 'Nitab4.5_0001796g0030' => 'nta', 'Nitab4.5_0003348g0060' => 'nta', 'Nitab4.5_0003698g0040' => 'nta', 'Nitab4.5_0003942g0090' => 'nta', 'Nitab4.5_0004775g0070' => 'nta', 'Nitab4.5_0004864g0030' => 'nta', 'Nitab4.5_0005615g0020' => 'nta', 'Nitab4.5_0009288g0030' => 'nta', 'Nitab4.5_0009341g0010' => 'nta', 'Nitab4.5_0009535g0010' => 'nta', 'Nn1g03995' => 'nnu', 'Nn1g04100' => 'nnu', 'Nn1g06530' => 'nnu', 'Nn3g16404' => 'nnu', 'Nn3g17212' => 'nnu', 'Nn3g20776' => 'nnu', 'Nn3g21923' => 'nnu', 'Nn5g27737' => 'nnu', 'Nn5g29461' => 'nnu', 'Nn7g38355' => 'nnu', 'Nn8g39873' => 'nnu', 'Oeu000548.2' => 'oeu', 'Oeu004672.1' => 'oeu', 'Oeu015605.2' => 'oeu', 'Oeu016092.1' => 'oeu', 'Oeu017879.3' => 'oeu', 'Oeu024910.1' => 'oeu', 'Oeu028965.1' => 'oeu', 'Oeu031269.1' => 'oeu', 'Oeu031270.1' => 'oeu', 'Oeu032535.1' => 'oeu', 'Oeu034151.1' => 'oeu', 'Oeu034152.1' => 'oeu', 'Oeu034588.2' => 'oeu', 'Oeu050846.1' => 'oeu', 'Oeu050849.2' => 'oeu', 'Oeu051063.2' => 'oeu', 'Oeu052368.1' => 'oeu', 'Oeu052370.1' => 'oeu', 'Os01g0210400' => 'osa', 'Os01g0304300' => 'osa', 'Os01g0749100' => 'osa', 'Os02g0745800' => 'osa', 'Os03g0769050' => 'osa', 'Os05g0531500' => 'osa', 'Os06g0724300' => 'osa', 'Os11g0198100' => 'osa', 'Peaxi162Scf00069g01425' => 'pax', 'Peaxi162Scf00280g00811' => 'pax', 'Peaxi162Scf00310g00615' => 'pax', 'Peaxi162Scf00362g00542' => 'pax', 'Peaxi162Scf00461g00310' => 'pax', 'Peaxi162Scf00530g00118' => 'pax', 'Peaxi162Scf00541g00057' => 'pax', 'Peaxi162Scf00661g00017' => 'pax', 'Peaxi162Scf00926g00027' => 'pax', 'Peaxi162Scf01064g00263' => 'pax', 'Peaxi162Scf01211g00135' => 'pax', 'PGR004G2336' => 'pgr', 'PGR042G0327' => 'pgr', 'PGR042G1957' => 'pgr', 'PGR042G2003' => 'pgr', 'PGR042G3929' => 'pgr', 'PGR083G1137' => 'pgr', 'PGR083G1364' => 'pgr', 'PGSC0003DMG400003381' => 'stu', 'PGSC0003DMG400003417' => 'stu', 'PGSC0003DMG400008981' => 'stu', 'PGSC0003DMG400012417' => 'stu', 'PGSC0003DMG400012823' => 'stu', 'PGSC0003DMG400016885' => 'stu', 'PGSC0003DMG400022812' => 'stu', 'PGSC0003DMG400029726' => 'stu', 'PGSC0003DMG401009243' => 'stu', 'PGSC0003DMG401031505' => 'stu', 'PGSC0003DMG402031505' => 'stu', 'Phvul.001G017600' => 'pvu', 'Phvul.002G193500' => 'pvu', 'Phvul.002G228900' => 'pvu', 'Phvul.002G236800' => 'pvu', 'Phvul.003G049500' => 'pvu', 'Phvul.005G072000' => 'pvu', 'Phvul.006G164800' => 'pvu', 'Phvul.006G185100' => 'pvu', 'Phvul.007G090000' => 'pvu', 'Potri.001G399800' => 'ptr', 'Potri.002G149900' => 'ptr', 'Potri.004G044100' => 'ptr', 'Potri.004G177600' => 'ptr', 'Potri.009G138000' => 'ptr', 'Potri.010G094000' => 'ptr', 'Potri.011G053000' => 'ptr', 'Potri.011G119300' => 'ptr', 'Potri.013G113700' => 'ptr', 'Potri.018G107800' => 'ptr', 'Potri.019G084100' => 'ptr', 'Pp3c14_23720' => 'ppa', 'Pp3c16_6340' => 'ppa', 'Pp3c23_13420' => 'ppa', 'Pp3c24_2740' => 'ppa', 'Pp3c25_860' => 'ppa', 'Pp3c8_21750' => 'ppa', 'Prupe.1G273000' => 'ppe', 'Prupe.1G273700' => 'ppe', 'Prupe.1G274100' => 'ppe', 'Prupe.2G023300' => 'ppe', 'Prupe.4G048000' => 'ppe', 'Prupe.4G080400' => 'ppe', 'Prupe.4G181200' => 'ppe', 'Prupe.8G056900' => 'ppe', 'Prupe.8G168700' => 'ppe', 'Psat1g189080' => 'psa', 'Psat1g204760' => 'psa', 'Psat4g175560' => 'psa', 'Psat4g177720' => 'psa', 'Psat5g244240' => 'psa', 'Psat6g010720' => 'psa', 'Psat6g187200' => 'psa', 'Psat7g072040' => 'psa', 'PSO017G3501' => 'pso', 'PSO063G2148' => 'pso', 'PSO063G5608' => 'pso', 'PSO210G6392' => 'pso', 'PSO541G2319' => 'pso', 'PSO541G2836' => 'pso', 'PSO541G4012' => 'pso', 'PSO541G6253' => 'pso', 'PSO675G0580' => 'pso', 'PSO675G0856' => 'pso', 'PSO675G5635' => 'pso', 'PSO675G9157' => 'pso', 'PSO832G1660' => 'pso', 'PSO832G1969' => 'pso', 'QL02p007186' => 'qlo', 'QL02p033904' => 'qlo', 'QL03p064391' => 'qlo', 'QL05p040593' => 'qlo', 'QL05p058242' => 'qlo', 'QL08p021825' => 'qlo', 'QL11p004981' => 'qlo', 'RcHm_v2.0_Chr1g0318301' => 'rch', 'RcHm_v2.0_Chr4g0418501' => 'rch', 'RcHm_v2.0_Chr4g0439971' => 'rch', 'RcHm_v2.0_Chr5g0008541' => 'rch', 'RcHm_v2.0_Chr5g0014101' => 'rch', 'RcHm_v2.0_Chr5g0014131' => 'rch', 'RcHm_v2.0_Chr5g0033621' => 'rch', 'RcHm_v2.0_Chr6g0272041' => 'rch', 'RcHm_v2.0_Chr6g0278831' => 'rch', 'Rhsim02G0130400' => 'rsi', 'Rhsim02G0171100' => 'rsi', 'Rhsim05G0053000' => 'rsi', 'Rhsim05G0053100' => 'rsi', 'Rhsim06G0096500' => 'rsi', 'Rhsim06G0096600' => 'rsi', 'Rhsim06G0199100' => 'rsi', 'Rhsim12G0062300' => 'rsi', 'Rhsim12G0062800' => 'rsi', 'Sabra02G0118600' => 'sbr', 'Sabra04G0027300' => 'sbr', 'Sabra04G0119500' => 'sbr', 'Sabra08G0112500' => 'sbr', 'Sabra11G0036800' => 'sbr', 'Sabra11G0103800' => 'sbr', 'Sabra13G0096300' => 'sbr', 'Sabra16G0262300' => 'sbr', 'Sabra18G0091700' => 'sbr', 'Sabra19G0095400' => 'sbr', 'SalBow6G3080' => 'sbo', 'SalBow7G1157' => 'sbo', 'SalBow7G2123' => 'sbo', 'SalBow7G2285' => 'sbo', 'SalBow7G3537' => 'sbo', 'SalBow8G2947' => 'sbo', 'SalBow8G4463' => 'sbo', 'SalBow8G5466' => 'sbo', 'Sc01g0001750' => 'sci', 'Sc02g0006640' => 'sci', 'Sc02g0006670' => 'sci', 'Sc04g0008220' => 'sci', 'Sc05g0006190' => 'sci', 'Sc08g0002760' => 'sci', 'Sc17g0006170' => 'sci', 'Sc22g0002050' => 'sci', 'Sc23g0001190' => 'sci', 'Sc24g0000980' => 'sci', 'Sed0006245' => 'sed', 'Sed0007543' => 'sed', 'Sed0009411' => 'sed', 'Sed0010765' => 'sed', 'Sed0012944' => 'sed', 'Sed0014682' => 'sed', 'Sed0016174' => 'sed', 'Sed0016796' => 'sed', 'Sed0020317' => 'sed', 'Sed0021467' => 'sed', 'SEGI_01316' => 'sgi', 'SEGI_03374' => 'sgi', 'SEGI_16265' => 'sgi', 'SEGI_18569' => 'sgi', 'SEGI_20351' => 'sgi', 'SEGI_26395' => 'sgi', 'SEGI_29469' => 'sgi', 'SEGI_34771' => 'sgi', 'SEGI_36769' => 'sgi', 'SEGI_37139' => 'sgi', 'SGA_v2.0_scaffold100G29687' => 'sas', 'SGA_v2.0_scaffold118G32472' => 'sas', 'SGA_v2.0_scaffold14G07051' => 'sas', 'SGA_v2.0_scaffold183G39845' => 'sas', 'SGA_v2.0_scaffold1G00174' => 'sas', 'SGA_v2.0_scaffold22G09714' => 'sas', 'SGA_v2.0_scaffold333G48992' => 'sas', 'SGA_v2.0_scaffold46G17491' => 'sas', 'SGA_v2.0_scaffold49G18294' => 'sas', 'SGA_v2.0_scaffold63G21658' => 'sas', 'SHI01741' => 'shi', 'SHI05771' => 'shi', 'SHI18077' => 'shi', 'SHI20525' => 'shi', 'SHI20527' => 'shi', 'SHI20528' => 'shi', 'SMO172G0185' => 'smo', 'SMO198G0020' => 'smo', 'SMO351G0006' => 'smo', 'SMO356G0118' => 'smo', 'SMO358G0296' => 'smo', 'SMO367G0079' => 'smo', 'SMO367G1277' => 'smo', 'Solyc01g014220.3' => 'sly', 'Solyc01g111770.2' => 'sly', 'Solyc02g078180.3' => 'sly', 'Solyc03g006430.3' => 'sly', 'Solyc03g006456.1' => 'sly', 'Solyc03g079860.2' => 'sly', 'Solyc04g079770.3' => 'sly', 'Solyc05g007430.4' => 'sly', 'Solyc07g063150.3' => 'sly', 'Solyc08g016620.3' => 'sly', 'Solyc09g057590.3' => 'sly', 'Solyc09g057600.1' => 'sly', 'Solyc10g009050.3' => 'sly', 'Solyc11g017420.2' => 'sly', 'Sopen01g053810' => 'spe', 'Sopen02g023040' => 'spe', 'Sopen03g002440' => 'spe', 'Sopen04g033350' => 'spe', 'Sopen05g003310' => 'spe', 'Sopen07g004050' => 'spe', 'Sopen07g031340' => 'spe', 'Sopen08g006990' => 'spe', 'Sopen10g004830' => 'spe', 'Sopen11g009370' => 'spe', 'Sp1g24450' => 'spa', 'Sp1g29670' => 'spa', 'Sp1g39600' => 'spa', 'Sp2g11080' => 'spa', 'Sp2g13970' => 'spa', 'Sp4g16130' => 'spa', 'Sp6g13080' => 'spa', 'Sp7g37270' => 'spa', 'TAR371G0065' => 'tar', 'TAR376G0340' => 'tar', 'TAR376G0435' => 'tar', 'TAR381G0002' => 'tar', 'TAR381G1236' => 'tar', 'TAR624G0055' => 'tar', 'TAR624G0324' => 'tar', 'TAR624G0696' => 'tar', 'TAR624G0906' => 'tar', 'TAR625G0107' => 'tar', 'TAR626G0015' => 'tar', 'TAR626G1356' => 'tar', 'TAR627G0888' => 'tar', 'TAR628G0399' => 'tar', 'TAR628G1327' => 'tar', 'TAR629G2831' => 'tar', 'TAR629G2874' => 'tar', 'TAR633G1432' => 'tar', 'TAR633G2771' => 'tar', 'THA.LOC104803394' => 'tha', 'THA.LOC104805153' => 'tha', 'THA.LOC104806784' => 'tha', 'THA.LOC104810473' => 'tha', 'THA.LOC104813100' => 'tha', 'THA.LOC104814215' => 'tha', 'THA.LOC104815554' => 'tha', 'THA.LOC104820544' => 'tha', 'THA.LOC104824754' => 'tha', 'THA.LOC104827717' => 'tha', 'Thecc.02G031400' => 'tca', 'Thecc.02G055900' => 'tca', 'Thecc.02G350800' => 'tca', 'Thecc.06G150900' => 'tca', 'Thecc.06G186600' => 'tca', 'Thecc.07G089600' => 'tca', 'Thecc.08G020400' => 'tca', 'Thecc.08G182100' => 'tca', 'Thhalv10000873m.g' => 'esa', 'Thhalv10004185m.g' => 'esa', 'Thhalv10006981m.g' => 'esa', 'Thhalv10007204m.g' => 'esa', 'Thhalv10011374m.g' => 'esa', 'Thhalv10013482m.g' => 'esa', 'Thhalv10017801m.g' => 'esa', 'Thhalv10024983m.g' => 'esa', 'TPR.G12072' => 'tpr', 'TPR.G15769' => 'tpr', 'TPR.G16504' => 'tpr', 'TPR.G16506' => 'tpr', 'TPR.G24345' => 'tpr', 'TPR.G26666' => 'tpr', 'TPR.G27320' => 'tpr', 'TPR.G31819' => 'tpr', 'TPR.G38879' => 'tpr', 'TPR.G39015' => 'tpr', 'TPR.G8819' => 'tpr', 'TWI09G0924' => 'twi', 'TWI12G0811' => 'twi', 'TWI12G1294' => 'twi', 'TWI31G0150' => 'twi', 'TWI36G1262' => 'twi', 'TWI38G1287' => 'twi', 'TWI38G1633' => 'twi', 'TWI38G1982' => 'twi', 'TWI39G0116' => 'twi', 'TWI60G1011' => 'twi', 'TWI63G0171' => 'twi', 'TWI73G0839' => 'twi', 'TWI79G1511' => 'twi', 'unitig_0.g915' => 'ugi', 'unitig_0.g916' => 'ugi', 'unitig_21.g20219' => 'ugi', 'unitig_21.g20416' => 'ugi', 'unitig_578.g16132' => 'ugi', 'unitig_578.g16718' => 'ugi', 'unitig_62.g23481' => 'ugi', 'unitig_744.g24535' => 'ugi', 'unitig_749.g13525' => 'ugi', 'vmacro01248' => 'vma', 'vmacro02290' => 'vma', 'vmacro10946' => 'vma', 'vmacro11865' => 'vma', 'vmacro12493' => 'vma', 'vmacro17322' => 'vma', 'vmacro21599' => 'vma', 'vmacro23041' => 'vma', 'VMungo0251G0004' => 'vmu', 'VMungo0251G2639' => 'vmu', 'VMungo0251G2967' => 'vmu', 'VMungo0540G0864' => 'vmu', 'VMungo0540G1569' => 'vmu', 'VMungo0647G0317' => 'vmu', 'VMungo0720G1373' => 'vmu', 'VMungo0720G1508' => 'vmu', 'VMungo1080G0485' => 'vmu', 'VMungo1215G3177' => 'vmu', 'Zm00001eb112600' => 'zma', 'Zm00001eb120220' => 'zma', 'Zm00001eb153240' => 'zma', 'Zm00001eb168880' => 'zma', 'Zm00001eb213920' => 'zma', 'Zm00001eb228280' => 'zma', 'Zm00001eb254580' => 'zma', 'Zm00001eb272180' => 'zma', 'Zm00001eb293190' => 'zma', 'Zm00001eb322930' => 'zma', 'Zm00001eb353360' => 'zma', 'Zm00001eb353390' => 'zma', 'Zm00001eb353430' => 'zma', 'Zm00001eb353440' => 'zma', 'Zm00001eb353780' => 'zma' ) $gf_id = 'HOM05D000499' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000499' ) $data_identifier = 'HOM05D000499' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 29, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 12, 'amhyb' => (int) 8, 'aly' => (int) 12, 'aox' => (int) 9, 'arhy' => (int) 26, 'ath' => (int) 8, 'atr' => (int) 7, 'acertr' => (int) 10, 'cqu' => (int) 15, 'bca' => (int) 29, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 11, 'cansat' => (int) 8, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 9, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 8, 'cpa' => (int) 10, 'csa' => (int) 7, 'camsi' => (int) 20, 'dca' => (int) 8, 'din' => (int) 12, 'dzi' => (int) 14, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 6, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 38, 'gra' => (int) 16, 'vvi' => (int) 8, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 5, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 11, 'lja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 11, 'mpo' => (int) 3, 'mbi' => (int) 14, 'mdo' => (int) 14, 'mtr' => (int) 8, 'cme' => (int) 9, 'egut' => (int) 9, 'ama' => (int) 11, 'nta' => (int) 17, 'nnu' => (int) 11, 'oeu' => (int) 18, 'osa' => (int) 8, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 6, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 9, 'rsi' => (int) 9, 'sbr' => (int) 10, 'sbo' => (int) 8, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 10, 'sas' => (int) 10, 'shi' => (int) 6, 'smo' => (int) 7, 'sly' => (int) 14, 'spe' => (int) 10, 'spa' => (int) 8, 'tar' => (int) 19, 'tha' => (int) 10, 'tca' => (int) 8, 'esa' => (int) 8, 'tpr' => (int) 11, 'twi' => (int) 13, 'ugi' => (int) 9, 'vma' => (int) 8, 'vmu' => (int) 10, 'zma' => (int) 15 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb353780' $species_info = array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ) $local_species = 'cpa' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000499', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1066', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p29780' => 'bna', 'A02p33180' => 'bna', 'A03p16470' => 'bna', 'A03p66010' => 'bna', 'A04p25970' => 'bna', 'A06p01270' => 'bna', 'A06p46080' => 'bna', 'A07p11400' => 'bna', 'A08p01840' => 'bna', 'A08p08230' => 'bna', 'A08p25740' => 'bna', 'A09p32070' => 'bna', 'A09p37830' => 'bna', 'A09p42840' => 'bna', 'A09p42850' => 'bna', 'Aa31LG10G2060' => 'aar', 'Aa31LG2G7410' => 'aar', 'Aa31LG6G10200' => 'aar', 'Aa31LG6G16680' => 'aar', 'Aa31LG6G8470' => 'aar', 'Aa31LG9G12730' => 'aar', 'Aa31LG9G13680' => 'aar', 'Aa31LG9G14920' => 'aar', 'Aa31LG9G6650' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4977' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5467' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3254' => 'aag', 'Actinidia02578' => 'ach', 'Actinidia07693' => 'ach', 'Actinidia08413' => 'ach', 'Actinidia08414' => 'ach', 'Actinidia15289' => 'ach', 'Actinidia19871' => 'ach', 'Actinidia21475' => 'ach', 'Actinidia22576' => 'ach', 'Actinidia28327' => 'ach', 'Actinidia32491' => 'ach', 'Actinidia39463' => 'ach', 'Actinidia39571' => 'ach', 'Ah.01g013750' => 'amhyb', 'Ah.01g023210' => 'amhyb', 'Ah.04g164850' => 'amhyb', 'Ah.05g178060' => 'amhyb', 'Ah.07g204270' => 'amhyb', 'Ah.07g208480' => 'amhyb', 'Ah.09g237410' => 'amhyb', 'Ah.14g089460' => 'amhyb', 'AL1G41790' => 'aly', 'AL1G49050' => 'aly', 'AL1G53810' => 'aly', 'AL1G61400' => 'aly', 'AL4G18580' => 'aly', 'AL5G12510' => 'aly', 'AL5G12540' => 'aly', 'AL6G43230' => 'aly', 'AL7G10370' => 'aly', 'AL7G19250' => 'aly', 'AL8G12240' => 'aly', 'AL8G18540' => 'aly', 'Aqoxy1G02409' => 'aox', 'Aqoxy2G03993' => 'aox', 'Aqoxy3G03357' => 'aox', 'Aqoxy4G00785' => 'aox', 'Aqoxy5G02598' => 'aox', 'Aqoxy6G00132' => 'aox', 'Aqoxy7G01776' => 'aox', 'Aqoxy7G02316' => 'aox', 'Aqoxy7G03973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.12AFKW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B8730' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27IQR1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3F75VG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3RE0GA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41TCQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.527VTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FIR39' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5W8UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DA38EV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ63HS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H1I32C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HC27T5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4M8AP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7N3CZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9UVDZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LS1NQA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT1D4B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SKC4TM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCFV76' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF9Q1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQWD9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1ZM88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WE07RT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YCK7VH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJE6Q6' => 'arhy', 'AT1G28240' => 'ath', 'AT1G34550' => 'ath', 'AT1G53040' => 'ath', 'AT2G02910' => 'ath', 'AT4G09630' => 'ath', 'AT4G38500' => 'ath', 'AT5G42660' => 'ath', 'AT5G46220' => 'ath', 'ATR0152G026' => 'atr', 'ATR0564G343' => 'atr', 'ATR0706G151' => 'atr', 'ATR0733G207' => 'atr', 'ATR0751G234' => 'atr', 'ATR0807G048' => 'atr', 'ATR1091G084' => 'atr', 'Atru.chr10.1229' => 'acertr', 'Atru.chr10.1230' => 'acertr', 'Atru.chr10.1874' => 'acertr', 'Atru.chr11.1808' => 'acertr', 'Atru.chr13.1795' => 'acertr', 'Atru.chr13.570' => 'acertr', 'Atru.chr2.2608' => 'acertr', 'Atru.chr2.2609' => 'acertr', 'Atru.chr5.3428' => 'acertr', 'Atru.chr8.1171' => 'acertr', 'AUR62004651' => 'cqu', 'AUR62008675' => 'cqu', 'AUR62010014' => 'cqu', 'AUR62013004' => 'cqu', 'AUR62014825' => 'cqu', 'AUR62015015' => 'cqu', 'AUR62015151' => 'cqu', 'AUR62017020' => 'cqu', 'AUR62019422' => 'cqu', 'AUR62023570' => 'cqu', 'AUR62025571' => 'cqu', 'AUR62029098' => 'cqu', 'AUR62033863' => 'cqu', 'AUR62034296' => 'cqu', 'AUR62040075' => 'cqu', 'BcaB02g07334' => 'bca', 'BcaB02g10575' => 'bca', 'BcaB03g12119' => 'bca', 'BcaB03g12120' => 'bca', 'BcaB03g13945' => 'bca', 'BcaB04g17123' => 'bca', 'BcaB04g17867' => 'bca', 'BcaB04g19839' => 'bca', 'BcaB07g30317' => 'bca', 'BcaB07g32432' => 'bca', 'BcaB07g33362' => 'bca', 'BcaB08g36611' => 'bca', 'BcaC01g00028' => 'bca', 'BcaC01g01356' => 'bca', 'BcaC01g02034' => 'bca', 'BcaC01g06051' => 'bca', 'BcaC03g16839' => 'bca', 'BcaC03g17176' => 'bca', 'BcaC05g26829' => 'bca', 'BcaC06g31490' => 'bca', 'BcaC06g35344' => 'bca', 'BcaC06g36570' => 'bca', 'BcaC07g37537' => 'bca', 'BcaC08g43491' => 'bca', 'BcaC08g43773' => 'bca', 'BcaNung00234' => 'bca', 'BcaNung01982' => 'bca', 'BcaNung03707' => 'bca', 'BcaNung06454' => 'bca', 'BolC2t10762H' => 'bol', 'BolC2t11191H' => 'bol', 'BolC3t14322H' => 'bol', 'BolC3t19747H' => 'bol', 'BolC3t21425H' => 'bol', 'BolC4t27800H' => 'bol', 'BolC5t31423H' => 'bol', 'BolC6t35951H' => 'bol', 'BolC6t36282H' => 'bol', 'BolC7t40678H' => 'bol', 'BolC7t40679H' => 'bol', 'BolC7t42222H' => 'bol', 'BolC7t43492H' => 'bol', 'BolC7t46785H' => 'bol', 'BolC8t47853H' => 'bol', 'BolC9t56805H' => 'bol', 'BraA02t08000Z' => 'bra', 'BraA02t08341Z' => 'bra', 'BraA03t10936Z' => 'bra', 'BraA03t15657Z' => 'bra', 'BraA04t18100Z' => 'bra', 'BraA05t20523Z' => 'bra', 'BraA06t23353Z' => 'bra', 'BraA06t27473Z' => 'bra', 'BraA06t27769Z' => 'bra', 'BraA07t28928Z' => 'bra', 'BraA08t32236Z' => 'bra', 'BraA08t32841Z' => 'bra', 'BraA08t34524Z' => 'bra', 'BraA09t38742Z' => 'bra', 'BraA09t39295Z' => 'bra', 'C02p47180' => 'bna', 'C02p50990' => 'bna', 'C03p19360' => 'bna', 'C03p74950' => 'bna', 'C03p91000' => 'bna', 'C04p63260' => 'bna', 'C05p27050' => 'bna', 'C06p08750' => 'bna', 'C06p11490' => 'bna', 'C07p02820' => 'bna', 'C07p17180' => 'bna', 'C07p29440' => 'bna', 'C07p63730' => 'bna', 'C09p39260' => 'bna', 'CAN.G1164.34' => 'can', 'CAN.G1164.39' => 'can', 'CAN.G1530.3' => 'can', 'CAN.G162.61' => 'can', 'CAN.G176.6' => 'can', 'CAN.G289.49' => 'can', 'CAN.G370.21' => 'can', 'CAN.G370.22' => 'can', 'CAN.G371.117' => 'can', 'CAN.G58.37' => 'can', 'CAN.G588.98' => 'can', 'CANSAT21G2266' => 'cansat', 'CANSAT25G2799' => 'cansat', 'CANSAT35G0862' => 'cansat', 'CANSAT35G1704' => 'cansat', 'CANSAT35G1760' => 'cansat', 'CANSAT56G3971' => 'cansat', 'CANSAT56G4116' => 'cansat', 'CANSAT80G1259' => 'cansat', 'CARHR027730' => 'chi', 'CARHR033880' => 'chi', 'CARHR043270' => 'chi', 'CARHR145330' => 'chi', 'CARHR145340' => 'chi', 'CARHR175570' => 'chi', 'CARHR181570' => 'chi', 'CARHR258470' => 'chi', 'CARHR260490' => 'chi', 'CARHR294220' => 'chi', 'Carub.0001s2668' => 'cru', 'Carub.0001s3257' => 'cru', 'Carub.0001s4220' => 'cru', 'Carub.0005s0179' => 'cru', 'Carub.0006s2807' => 'cru', 'Carub.0007s0039' => 'cru', 'Carub.0008s0169' => 'cru', 'Carub.0008s0636' => 'cru', 'Ca_00338_v3' => 'car', 'Ca_00542_v3' => 'car', 'Ca_01844_v3' => 'car', 'Ca_10611_v3' => 'car', 'Ca_13326_v3' => 'car', 'Ca_17944_v3' => 'car', 'Ca_18546_v3' => 'car', 'Ca_24219_v3' => 'car', 'Ca_29972_v3' => 'car', 'CBR_g3681' => 'cbr', 'CBR_g40021' => 'cbr', 'Cc01_g08140' => 'ccan', 'Cc02_g13410' => 'ccan', 'Cc02_g37480' => 'ccan', 'Cc05_g12030' => 'ccan', 'Cc09_g03370' => 'ccan', 'Cc09_g10300' => 'ccan', 'Cc10_g03530' => 'ccan', 'Cc10_g11380' => 'ccan', 'CDE01G0176' => 'cde', 'CDE02G0675' => 'cde', 'CDE02G0942' => 'cde', 'CDE02G1153' => 'cde', 'CDE02G4177' => 'cde', 'CDE04G2117' => 'cde', 'CDE04G2736' => 'cde', 'CDE08G1161' => 'cde', 'CDE09G1238' => 'cde', 'Cfa000467' => 'cfa', 'Cfa000947' => 'cfa', 'Cfa004969' => 'cfa', 'Cfa005284' => 'cfa', 'Cfa008993' => 'cfa', 'Cfa018187' => 'cfa', 'Cfa018454' => 'cfa', 'Cfa020585' => 'cfa', 'Ciclev10000424m.g' => 'ccl', 'Ciclev10003605m.g' => 'ccl', 'Ciclev10007828m.g' => 'ccl', 'Ciclev10014620m.g' => 'ccl', 'Ciclev10015169m.g' => 'ccl', 'Ciclev10018291m.g' => 'ccl', 'Ciclev10028256m.g' => 'ccl', 'Ciclev10033822m.g' => 'ccl', 'CiPaw.05G060300' => 'cil', 'CiPaw.05G085000' => 'cil', 'CiPaw.06G083700' => 'cil', 'CiPaw.06G120300' => 'cil', 'CiPaw.09G060500' => 'cil', 'CiPaw.09G123800' => 'cil', 'CiPaw.11G169700' => 'cil', 'CiPaw.12G118300' => 'cil', 'CiPaw.15G071000' => 'cil', 'CiPaw.15G081900' => 'cil', 'ClCG01G024610' => 'cla', 'ClCG03G006070' => 'cla', 'ClCG05G019250' => 'cla', 'ClCG09G009500' => 'cla', 'ClCG11G008200' => 'cla', 'ClCG11G018080' => 'cla', 'COL.COLO4_17373' => 'col', 'COL.COLO4_22994' => 'col', 'COL.COLO4_26389' => 'col', 'COL.COLO4_27170' => 'col', 'COL.COLO4_31074' => 'col', 'COL.COLO4_31465' => 'col', 'COL.COLO4_36438' => 'col', 'COL.COLO4_36439' => 'col', 'Cpa.g.c38781' => 'cpa', 'Cpa.g.sc128.12' => 'cpa', 'Cpa.g.sc166.7' => 'cpa', 'Cpa.g.sc166.8' => 'cpa', 'Cpa.g.sc20.111' => 'cpa', 'Cpa.g.sc27.31' => 'cpa', 'Cpa.g.sc64.36' => 'cpa', 'Cpa.g.sc64.37' => 'cpa', 'Cpa.g.sc66.49' => 'cpa', 'Cpa.g.sc80.64' => 'cpa', 'CsaV3_1G012320' => 'csa', 'CsaV3_2G008480' => 'csa', 'CsaV3_2G033450' => 'csa', 'CsaV3_3G044830' => 'csa', 'CsaV3_4G033710' => 'csa', 'CsaV3_6G051730' => 'csa', 'CsaV3_7G025350' => 'csa', 'CSS0001067' => 'camsi', 'CSS0005996' => 'camsi', 'CSS0006590' => 'camsi', 'CSS0009673' => 'camsi', 'CSS0010201' => 'camsi', 'CSS0010549' => 'camsi', 'CSS0011364' => 'camsi', 'CSS0014473' => 'camsi', 'CSS0014961' => 'camsi', 'CSS0020191' => 'camsi', 'CSS0021165' => 'camsi', 'CSS0022306' => 'camsi', 'CSS0030591' => 'camsi', 'CSS0030696' => 'camsi', 'CSS0032653' => 'camsi', 'CSS0037487' => 'camsi', 'CSS0041102' => 'camsi', 'CSS0041261' => 'camsi', 'CSS0046246' => 'camsi', 'CSS0049256' => 'camsi', 'DCAR_004075' => 'dca', 'DCAR_011538' => 'dca', 'DCAR_019553' => 'dca', 'DCAR_020952' => 'dca', 'DCAR_021739' => 'dca', 'DCAR_027407' => 'dca', 'DCAR_027913' => 'dca', 'DCAR_028066' => 'dca', 'Dinv05899' => 'din', 'Dinv07563' => 'din', 'Dinv08010' => 'din', 'Dinv14125' => 'din', 'Dinv20172' => 'din', 'Dinv30743' => 'din', 'Dinv31229' => 'din', 'Dinv34162' => 'din', 'Dinv36028' => 'din', 'Dinv39368' => 'din', 'Dinv40565' => 'din', 'Dinv41706' => 'din', 'Duzib052G0089' => 'dzi', 'Duzib116G0641' => 'dzi', 'Duzib132G0069' => 'dzi', 'Duzib132G1219' => 'dzi', 'Duzib147G0278' => 'dzi', 'Duzib160G0480' => 'dzi', 'Duzib170G0661' => 'dzi', 'Duzib177G0591' => 'dzi', 'Duzib187G1353' => 'dzi', 'Duzib192G0858' => 'dzi', 'Duzib192G0883' => 'dzi', 'Duzib213G0506' => 'dzi', 'Duzib235G0289' => 'dzi', 'Duzib251G0422' => 'dzi', 'ECA232G3898' => 'eca', 'ECA233G5950' => 'eca', 'ECA234G1699' => 'eca', 'ECA234G2421' => 'eca', 'ECA236G0426' => 'eca', 'ECA236G4331' => 'eca', 'ECA248G2573' => 'eca', 'EL10Ac1g00077' => 'bvu', 'EL10Ac1g01746' => 'bvu', 'EL10Ac2g03464' => 'bvu', 'EL10Ac4g08176' => 'bvu', 'EL10Ac7g17521' => 'bvu', 'EL10Ac8g20386' => 'bvu', 'EL10Ac9g21343' => 'bvu', 'EL10Ac9g22688' => 'bvu', 'Eucgr.B03434' => 'egr', 'Eucgr.D00618' => 'egr', 'Eucgr.E02395' => 'egr', 'Eucgr.F01129' => 'egr', 'Eucgr.F02622' => 'egr', 'Eucgr.F04207' => 'egr', 'FAN01G0570' => 'fan', 'FAN03G3351' => 'fan', 'FAN06G3702' => 'fan', 'FAN07G2149' => 'fan', 'FAN10G3758' => 'fan', 'FAN11G1170' => 'fan', 'FAN11G2050' => 'fan', 'FAN11G2724' => 'fan', 'FAN12G1700' => 'fan', 'FAN12G2028' => 'fan', 'FAN15G1160' => 'fan', 'FAN15G3063' => 'fan', 'FAN16G2540' => 'fan', 'FAN16G3077' => 'fan', 'FAN16G3624' => 'fan', 'FAN17G0221' => 'fan', 'FAN20G2492' => 'fan', 'FAN20G2905' => 'fan', 'FAN21G0548' => 'fan', 'FAN21G1300' => 'fan', 'FAN22G0077' => 'fan', 'FAN22G1315' => 'fan', 'FAN24G1280' => 'fan', 'FAN24G1445' => 'fan', 'FAN24G3527' => 'fan', 'FAN25G0464' => 'fan', 'FAN25G2885' => 'fan', 'FAN25G3270' => 'fan', 'FAN27G1101' => 'fan', 'FAN27G2846' => 'fan', 'FAN27G3524' => 'fan', 'FvH4_2g11770' => 'fve', 'FvH4_2g15630' => 'fve', 'FvH4_3g05570' => 'fve', 'FvH4_3g09110' => 'fve', 'FvH4_3g19940' => 'fve', 'FvH4_4g04821' => 'fve', 'FvH4_4g31480' => 'fve', 'FvH4_7g01740' => 'fve', 'Glyma.05G130400' => 'gma', 'Glyma.05G156400' => 'gma', 'Glyma.07G197000' => 'gma', 'Glyma.08G085151' => 'gma', 'Glyma.08G114500' => 'gma', 'Glyma.08G300400' => 'gma', 'Glyma.10G215800' => 'gma', 'Glyma.12G224400' => 'gma', 'Glyma.13G179300' => 'gma', 'Glyma.13G218151' => 'gma', 'Glyma.13G238800' => 'gma', 'Glyma.13G276900' => 'gma', 'Glyma.14G078200' => 'gma', 'Glyma.15G074500' => 'gma', 'Glyma.15G094100' => 'gma', 'Glyma.17G247200' => 'gma', 'Glyma.18G120100' => 'gma', 'Glyma.20G176000' => 'gma', 'Gohir.A01G063600' => 'ghi', 'Gohir.A01G170301' => 'ghi', 'Gohir.A02G060500' => 'ghi', 'Gohir.A05G133850' => 'ghi', 'Gohir.A05G161400' => 'ghi', 'Gohir.A06G012900' => 'ghi', 'Gohir.A06G035901' => 'ghi', 'Gohir.A06G127100' => 'ghi', 'Gohir.A06G210500' => 'ghi', 'Gohir.A08G008650' => 'ghi', 'Gohir.A09G072700' => 'ghi', 'Gohir.A09G088301' => 'ghi', 'Gohir.A10G040600' => 'ghi', 'Gohir.A12G036300' => 'ghi', 'Gohir.A12G143350' => 'ghi', 'Gohir.A12G165500' => 'ghi', 'Gohir.A13G145700' => 'ghi', 'Gohir.D01G050000' => 'ghi', 'Gohir.D01G051366' => 'ghi', 'Gohir.D01G161350' => 'ghi', 'Gohir.D02G065900' => 'ghi', 'Gohir.D05G164200' => 'ghi', 'Gohir.D05G355500' => 'ghi', 'Gohir.D06G010400' => 'ghi', 'Gohir.D06G111250' => 'ghi', 'Gohir.D06G132000' => 'ghi', 'Gohir.D06G210500' => 'ghi', 'Gohir.D07G165675' => 'ghi', 'Gohir.D08G062240' => 'ghi', 'Gohir.D08G086101' => 'ghi', 'Gohir.D08G138060' => 'ghi', 'Gohir.D09G072300' => 'ghi', 'Gohir.D10G041400' => 'ghi', 'Gohir.D11G191020' => 'ghi', 'Gohir.D11G212066' => 'ghi', 'Gohir.D12G036300' => 'ghi', 'Gohir.D12G168600' => 'ghi', 'Gohir.D13G150600' => 'ghi', 'Gorai.001G057300' => 'gra', 'Gorai.002G069900' => 'gra', 'Gorai.002G200000' => 'gra', 'Gorai.003G067600' => 'gra', 'Gorai.005G074800' => 'gra', 'Gorai.006G087300' => 'gra', 'Gorai.008G037500' => 'gra', 'Gorai.008G181400' => 'gra', 'Gorai.009G169400' => 'gra', 'Gorai.009G387900' => 'gra', 'Gorai.010G013300' => 'gra', 'Gorai.010G153800' => 'gra', 'Gorai.010G255800' => 'gra', 'Gorai.011G043700' => 'gra', 'Gorai.011G198900' => 'gra', 'Gorai.013G168400' => 'gra', 'GSVIVG01005212001' => 'vvi', 'GSVIVG01006163001' => 'vvi', 'GSVIVG01009625001' => 'vvi', 'GSVIVG01014338001' => 'vvi', 'GSVIVG01020005001' => 'vvi', 'GSVIVG01021450001' => 'vvi', 'GSVIVG01023975001' => 'vvi', 'GSVIVG01034490001' => 'vvi', 'HanXRQChr04g0112071' => 'han', 'HanXRQChr05g0131151' => 'han', 'HanXRQChr09g0262371' => 'han', 'HanXRQChr09g0268401' => 'han', 'HanXRQChr10g0279241' => 'han', 'HanXRQChr10g0297961' => 'han', 'HanXRQChr11g0326231' => 'han', 'HanXRQChr11g0328471' => 'han', 'HanXRQChr16g0507941' => 'han', 'HanXRQChr17g0560211' => 'han', 'Haze_02108' => 'cav', 'Haze_02428' => 'cav', 'Haze_05593' => 'cav', 'Haze_06448' => 'cav', 'Haze_09427' => 'cav', 'Haze_12022' => 'cav', 'Haze_17612' => 'cav', 'Haze_17928' => 'cav', 'Hma1.2p1_0032F.1_g019250' => 'hma', 'Hma1.2p1_0163F.1_g072690' => 'hma', 'Hma1.2p1_0265F.1_g106710' => 'hma', 'Hma1.2p1_0286F.1_g113970' => 'hma', 'Hma1.2p1_0363F.1_g136640' => 'hma', 'Hma1.2p1_0584F.1_g183470' => 'hma', 'Hma1.2p1_0885F.1_g232570' => 'hma', 'HPP92_006022' => 'vpl', 'HPP92_007320' => 'vpl', 'HPP92_011521' => 'vpl', 'HPP92_019387' => 'vpl', 'HPP92_024038' => 'vpl', 'Hund05891' => 'sun', 'Hund06450' => 'sun', 'Hund12053' => 'sun', 'Hund16800' => 'sun', 'Hund21222' => 'sun', 'Hund22896' => 'sun', 'Hund23746' => 'sun', 'Hund27083' => 'sun', 'Lalb_Chr02g0141831' => 'lal', 'Lalb_Chr02g0141841' => 'lal', 'Lalb_Chr05g0220411' => 'lal', 'Lalb_Chr06g0162081' => 'lal', 'Lalb_Chr09g0327651' => 'lal', 'Lalb_Chr13g0295051' => 'lal', 'Lalb_Chr15g0086801' => 'lal', 'Lalb_Chr16g0383781' => 'lal', 'Lalb_Chr16g0383791' => 'lal', 'Lalb_Chr18g0055441' => 'lal', 'Lalb_Chr18g0059611' => 'lal', 'Lalb_Chr20g0109661' => 'lal', 'Lalb_Chr20g0109831' => 'lal', 'Lalb_Chr20g0121871' => 'lal', 'Lalb_Chr22g0355361' => 'lal', 'Lalb_Chr25g0286371' => 'lal', 'Lj1A1187G43' => 'lonja', 'Lj1A1205T50' => 'lonja', 'Lj1A800G33' => 'lonja', 'Lj1C1187T7' => 'lonja', 'Lj1C843T11' => 'lonja', 'Lj1g0010940' => 'lja', 'Lj2A288T69' => 'lonja', 'Lj3g0024276' => 'lja', 'Lj4A47T76' => 'lonja', 'Lj4g0005805' => 'lja', 'Lj4g0006097' => 'lja', 'Lj4g0008528' => 'lja', 'Lj4g0024907' => 'lja', 'Lj5g0012472' => 'lja', 'Lj5g0018648' => 'lja', 'Lj6C789G1' => 'lonja', 'Lj6g0004000' => 'lja', 'Lj7A292G67' => 'lonja', 'Lj7A292T64' => 'lonja', 'Lj9A400T58' => 'lonja', 'Lsat_1_v5_gn_1_126181' => 'lsa', 'Lsat_1_v5_gn_4_123041' => 'lsa', 'Lsat_1_v5_gn_4_133620' => 'lsa', 'Lsat_1_v5_gn_4_53221' => 'lsa', 'Lsat_1_v5_gn_4_71961' => 'lsa', 'Lsat_1_v5_gn_7_105241' => 'lsa', 'Lsat_1_v5_gn_7_21361' => 'lsa', 'Lsat_1_v5_gn_7_28860' => 'lsa', 'Lsat_1_v5_gn_7_31260' => 'lsa', 'Lsat_1_v5_gn_8_52801' => 'lsa', 'Manes.02G191400' => 'mes', 'Manes.03G110100' => 'mes', 'Manes.04G071100' => 'mes', 'Manes.05G100500' => 'mes', 'Manes.05G164700' => 'mes', 'Manes.15G087000' => 'mes', 'Manes.15G121500' => 'mes', 'Manes.16G028300' => 'mes', 'Manes.17G046100' => 'mes', 'Manes.17G069800' => 'mes', 'Manes.18G100500' => 'mes', 'Mapoly0002s0109' => 'mpo', 'Mapoly0024s0007' => 'mpo', 'Mapoly0089s0032' => 'mpo', 'MBI04_g42241_MAGBIO' => 'mbi', 'MBI05_g11988_MAGBIO' => 'mbi', 'MBI05_g35452_MAGBIO' => 'mbi', 'MBI07_g30179_MAGBIO' => 'mbi', 'MBI07_g35859_MAGBIO' => 'mbi', 'MBI07_g35860_MAGBIO' => 'mbi', 'MBI07_g37166_MAGBIO' => 'mbi', 'MBI08_g18172_MAGBIO' => 'mbi', 'MBI09_g08441_MAGBIO' => 'mbi', 'MBI13_g01676_MAGBIO' => 'mbi', 'MBI14_g42955_MAGBIO' => 'mbi', 'MBI16_g13161_MAGBIO' => 'mbi', 'MBI17_g27204_MAGBIO' => 'mbi', 'MBI19_g21595_MAGBIO' => 'mbi', 'MD00G1148400' => 'mdo', 'MD02G1301200' => 'mdo', 'MD03G1227800' => 'mdo', 'MD05G1041100' => 'mdo', 'MD05G1124800' => 'mdo', 'MD05G1284000' => 'mdo', 'MD05G1338800' => 'mdo', 'MD05G1338900' => 'mdo', 'MD07G1022800' => 'mdo', 'MD10G1047500' => 'mdo', 'MD10G1127500' => 'mdo', 'MD10G1262300' => 'mdo', 'MD10G1293800' => 'mdo', 'MD16G1074300' => 'mdo', 'Medtr1g021670' => 'mtr', 'Medtr1g096320' => 'mtr', 'Medtr2g013690' => 'mtr', 'Medtr2g019450' => 'mtr', 'Medtr2g085170' => 'mtr', 'Medtr4g088785' => 'mtr', 'Medtr8g055930' => 'mtr', 'Medtr8g085850' => 'mtr', 'MELO3C002605.2' => 'cme', 'MELO3C003891.2' => 'cme', 'MELO3C004012.2' => 'cme', 'MELO3C007134.2' => 'cme', 'MELO3C008118.2' => 'cme', 'MELO3C016700.2' => 'cme', 'MELO3C024127.2' => 'cme', 'MELO3C033361.2' => 'cme', 'MELO3C033362.2' => 'cme', 'Migut.C00430' => 'egut', 'Migut.C01246' => 'egut', 'Migut.E00101' => 'egut', 'Migut.H01486' => 'egut', 'Migut.H01939' => 'egut', 'Migut.K00360' => 'egut', 'Migut.M00910' => 'egut', 'Migut.M01139' => 'egut', 'Migut.N02677' => 'egut', 'MSTRG.13252' => 'ama', 'MSTRG.14701' => 'ama', 'MSTRG.1521' => 'ama', 'MSTRG.15884' => 'ama', 'MSTRG.16242' => 'ama', 'MSTRG.22285' => 'ama', 'MSTRG.22444' => 'ama', 'MSTRG.2349' => 'ama', 'MSTRG.26308' => 'ama', 'MSTRG.28296' => 'ama', 'MSTRG.9895' => 'ama', 'Nitab4.5_0000110g0060' => 'nta', 'Nitab4.5_0000420g0130' => 'nta', 'Nitab4.5_0000422g0030' => 'nta', 'Nitab4.5_0000560g0180' => 'nta', 'Nitab4.5_0000703g0100' => 'nta', 'Nitab4.5_0000786g0200' => 'nta', 'Nitab4.5_0001336g0020' => 'nta', 'Nitab4.5_0001796g0030' => 'nta', 'Nitab4.5_0003348g0060' => 'nta', 'Nitab4.5_0003698g0040' => 'nta', 'Nitab4.5_0003942g0090' => 'nta', 'Nitab4.5_0004775g0070' => 'nta', 'Nitab4.5_0004864g0030' => 'nta', 'Nitab4.5_0005615g0020' => 'nta', 'Nitab4.5_0009288g0030' => 'nta', 'Nitab4.5_0009341g0010' => 'nta', 'Nitab4.5_0009535g0010' => 'nta', 'Nn1g03995' => 'nnu', 'Nn1g04100' => 'nnu', 'Nn1g06530' => 'nnu', 'Nn3g16404' => 'nnu', 'Nn3g17212' => 'nnu', 'Nn3g20776' => 'nnu', 'Nn3g21923' => 'nnu', 'Nn5g27737' => 'nnu', 'Nn5g29461' => 'nnu', 'Nn7g38355' => 'nnu', 'Nn8g39873' => 'nnu', 'Oeu000548.2' => 'oeu', 'Oeu004672.1' => 'oeu', 'Oeu015605.2' => 'oeu', 'Oeu016092.1' => 'oeu', 'Oeu017879.3' => 'oeu', 'Oeu024910.1' => 'oeu', 'Oeu028965.1' => 'oeu', 'Oeu031269.1' => 'oeu', 'Oeu031270.1' => 'oeu', 'Oeu032535.1' => 'oeu', 'Oeu034151.1' => 'oeu', 'Oeu034152.1' => 'oeu', 'Oeu034588.2' => 'oeu', 'Oeu050846.1' => 'oeu', 'Oeu050849.2' => 'oeu', 'Oeu051063.2' => 'oeu', 'Oeu052368.1' => 'oeu', 'Oeu052370.1' => 'oeu', 'Os01g0210400' => 'osa', 'Os01g0304300' => 'osa', 'Os01g0749100' => 'osa', 'Os02g0745800' => 'osa', 'Os03g0769050' => 'osa', 'Os05g0531500' => 'osa', 'Os06g0724300' => 'osa', 'Os11g0198100' => 'osa', 'Peaxi162Scf00069g01425' => 'pax', 'Peaxi162Scf00280g00811' => 'pax', 'Peaxi162Scf00310g00615' => 'pax', 'Peaxi162Scf00362g00542' => 'pax', 'Peaxi162Scf00461g00310' => 'pax', 'Peaxi162Scf00530g00118' => 'pax', 'Peaxi162Scf00541g00057' => 'pax', 'Peaxi162Scf00661g00017' => 'pax', 'Peaxi162Scf00926g00027' => 'pax', 'Peaxi162Scf01064g00263' => 'pax', 'Peaxi162Scf01211g00135' => 'pax', 'PGR004G2336' => 'pgr', 'PGR042G0327' => 'pgr', 'PGR042G1957' => 'pgr', 'PGR042G2003' => 'pgr', 'PGR042G3929' => 'pgr', 'PGR083G1137' => 'pgr', 'PGR083G1364' => 'pgr', 'PGSC0003DMG400003381' => 'stu', 'PGSC0003DMG400003417' => 'stu', 'PGSC0003DMG400008981' => 'stu', 'PGSC0003DMG400012417' => 'stu', 'PGSC0003DMG400012823' => 'stu', 'PGSC0003DMG400016885' => 'stu', 'PGSC0003DMG400022812' => 'stu', 'PGSC0003DMG400029726' => 'stu', 'PGSC0003DMG401009243' => 'stu', 'PGSC0003DMG401031505' => 'stu', 'PGSC0003DMG402031505' => 'stu', 'Phvul.001G017600' => 'pvu', 'Phvul.002G193500' => 'pvu', 'Phvul.002G228900' => 'pvu', 'Phvul.002G236800' => 'pvu', 'Phvul.003G049500' => 'pvu', 'Phvul.005G072000' => 'pvu', 'Phvul.006G164800' => 'pvu', 'Phvul.006G185100' => 'pvu', 'Phvul.007G090000' => 'pvu', 'Potri.001G399800' => 'ptr', 'Potri.002G149900' => 'ptr', 'Potri.004G044100' => 'ptr', 'Potri.004G177600' => 'ptr', 'Potri.009G138000' => 'ptr', 'Potri.010G094000' => 'ptr', 'Potri.011G053000' => 'ptr', 'Potri.011G119300' => 'ptr', 'Potri.013G113700' => 'ptr', 'Potri.018G107800' => 'ptr', 'Potri.019G084100' => 'ptr', 'Pp3c14_23720' => 'ppa', 'Pp3c16_6340' => 'ppa', 'Pp3c23_13420' => 'ppa', 'Pp3c24_2740' => 'ppa', 'Pp3c25_860' => 'ppa', 'Pp3c8_21750' => 'ppa', 'Prupe.1G273000' => 'ppe', 'Prupe.1G273700' => 'ppe', 'Prupe.1G274100' => 'ppe', 'Prupe.2G023300' => 'ppe', 'Prupe.4G048000' => 'ppe', 'Prupe.4G080400' => 'ppe', 'Prupe.4G181200' => 'ppe', 'Prupe.8G056900' => 'ppe', 'Prupe.8G168700' => 'ppe', 'Psat1g189080' => 'psa', 'Psat1g204760' => 'psa', 'Psat4g175560' => 'psa', 'Psat4g177720' => 'psa', 'Psat5g244240' => 'psa', 'Psat6g010720' => 'psa', 'Psat6g187200' => 'psa', 'Psat7g072040' => 'psa', 'PSO017G3501' => 'pso', 'PSO063G2148' => 'pso', 'PSO063G5608' => 'pso', 'PSO210G6392' => 'pso', 'PSO541G2319' => 'pso', 'PSO541G2836' => 'pso', 'PSO541G4012' => 'pso', 'PSO541G6253' => 'pso', 'PSO675G0580' => 'pso', 'PSO675G0856' => 'pso', 'PSO675G5635' => 'pso', 'PSO675G9157' => 'pso', 'PSO832G1660' => 'pso', 'PSO832G1969' => 'pso', 'QL02p007186' => 'qlo', 'QL02p033904' => 'qlo', 'QL03p064391' => 'qlo', 'QL05p040593' => 'qlo', 'QL05p058242' => 'qlo', 'QL08p021825' => 'qlo', 'QL11p004981' => 'qlo', 'RcHm_v2.0_Chr1g0318301' => 'rch', 'RcHm_v2.0_Chr4g0418501' => 'rch', 'RcHm_v2.0_Chr4g0439971' => 'rch', 'RcHm_v2.0_Chr5g0008541' => 'rch', 'RcHm_v2.0_Chr5g0014101' => 'rch', 'RcHm_v2.0_Chr5g0014131' => 'rch', 'RcHm_v2.0_Chr5g0033621' => 'rch', 'RcHm_v2.0_Chr6g0272041' => 'rch', 'RcHm_v2.0_Chr6g0278831' => 'rch', 'Rhsim02G0130400' => 'rsi', 'Rhsim02G0171100' => 'rsi', 'Rhsim05G0053000' => 'rsi', 'Rhsim05G0053100' => 'rsi', 'Rhsim06G0096500' => 'rsi', 'Rhsim06G0096600' => 'rsi', 'Rhsim06G0199100' => 'rsi', 'Rhsim12G0062300' => 'rsi', 'Rhsim12G0062800' => 'rsi', 'Sabra02G0118600' => 'sbr', 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'Solyc03g079860.2' => 'sly', 'Solyc04g079770.3' => 'sly', 'Solyc05g007430.4' => 'sly', 'Solyc07g063150.3' => 'sly', 'Solyc08g016620.3' => 'sly', 'Solyc09g057590.3' => 'sly', 'Solyc09g057600.1' => 'sly', 'Solyc10g009050.3' => 'sly', 'Solyc11g017420.2' => 'sly', 'Sopen01g053810' => 'spe', 'Sopen02g023040' => 'spe', 'Sopen03g002440' => 'spe', 'Sopen04g033350' => 'spe', 'Sopen05g003310' => 'spe', 'Sopen07g004050' => 'spe', 'Sopen07g031340' => 'spe', 'Sopen08g006990' => 'spe', 'Sopen10g004830' => 'spe', 'Sopen11g009370' => 'spe', 'Sp1g24450' => 'spa', 'Sp1g29670' => 'spa', 'Sp1g39600' => 'spa', 'Sp2g11080' => 'spa', 'Sp2g13970' => 'spa', 'Sp4g16130' => 'spa', 'Sp6g13080' => 'spa', 'Sp7g37270' => 'spa', 'TAR371G0065' => 'tar', 'TAR376G0340' => 'tar', 'TAR376G0435' => 'tar', 'TAR381G0002' => 'tar', 'TAR381G1236' => 'tar', 'TAR624G0055' => 'tar', 'TAR624G0324' => 'tar', 'TAR624G0696' => 'tar', 'TAR624G0906' => 'tar', 'TAR625G0107' => 'tar', 'TAR626G0015' => 'tar', 'TAR626G1356' => 'tar', 'TAR627G0888' => 'tar', 'TAR628G0399' => 'tar', 'TAR628G1327' => 'tar', 'TAR629G2831' => 'tar', 'TAR629G2874' => 'tar', 'TAR633G1432' => 'tar', 'TAR633G2771' => 'tar', 'THA.LOC104803394' => 'tha', 'THA.LOC104805153' => 'tha', 'THA.LOC104806784' => 'tha', 'THA.LOC104810473' => 'tha', 'THA.LOC104813100' => 'tha', 'THA.LOC104814215' => 'tha', 'THA.LOC104815554' => 'tha', 'THA.LOC104820544' => 'tha', 'THA.LOC104824754' => 'tha', 'THA.LOC104827717' => 'tha', 'Thecc.02G031400' => 'tca', 'Thecc.02G055900' => 'tca', 'Thecc.02G350800' => 'tca', 'Thecc.06G150900' => 'tca', 'Thecc.06G186600' => 'tca', 'Thecc.07G089600' => 'tca', 'Thecc.08G020400' => 'tca', 'Thecc.08G182100' => 'tca', 'Thhalv10000873m.g' => 'esa', 'Thhalv10004185m.g' => 'esa', 'Thhalv10006981m.g' => 'esa', 'Thhalv10007204m.g' => 'esa', 'Thhalv10011374m.g' => 'esa', 'Thhalv10013482m.g' => 'esa', 'Thhalv10017801m.g' => 'esa', 'Thhalv10024983m.g' => 'esa', 'TPR.G12072' => 'tpr', 'TPR.G15769' => 'tpr', 'TPR.G16504' => 'tpr', 'TPR.G16506' => 'tpr', 'TPR.G24345' => 'tpr', 'TPR.G26666' => 'tpr', 'TPR.G27320' => 'tpr', 'TPR.G31819' => 'tpr', 'TPR.G38879' => 'tpr', 'TPR.G39015' => 'tpr', 'TPR.G8819' => 'tpr', 'TWI09G0924' => 'twi', 'TWI12G0811' => 'twi', 'TWI12G1294' => 'twi', 'TWI31G0150' => 'twi', 'TWI36G1262' => 'twi', 'TWI38G1287' => 'twi', 'TWI38G1633' => 'twi', 'TWI38G1982' => 'twi', 'TWI39G0116' => 'twi', 'TWI60G1011' => 'twi', 'TWI63G0171' => 'twi', 'TWI73G0839' => 'twi', 'TWI79G1511' => 'twi', 'unitig_0.g915' => 'ugi', 'unitig_0.g916' => 'ugi', 'unitig_21.g20219' => 'ugi', 'unitig_21.g20416' => 'ugi', 'unitig_578.g16132' => 'ugi', 'unitig_578.g16718' => 'ugi', 'unitig_62.g23481' => 'ugi', 'unitig_744.g24535' => 'ugi', 'unitig_749.g13525' => 'ugi', 'vmacro01248' => 'vma', 'vmacro02290' => 'vma', 'vmacro10946' => 'vma', 'vmacro11865' => 'vma', 'vmacro12493' => 'vma', 'vmacro17322' => 'vma', 'vmacro21599' => 'vma', 'vmacro23041' => 'vma', 'VMungo0251G0004' => 'vmu', 'VMungo0251G2639' => 'vmu', 'VMungo0251G2967' => 'vmu', 'VMungo0540G0864' => 'vmu', 'VMungo0540G1569' => 'vmu', 'VMungo0647G0317' => 'vmu', 'VMungo0720G1373' => 'vmu', 'VMungo0720G1508' => 'vmu', 'VMungo1080G0485' => 'vmu', 'VMungo1215G3177' => 'vmu', 'Zm00001eb112600' => 'zma', 'Zm00001eb120220' => 'zma', 'Zm00001eb153240' => 'zma', 'Zm00001eb168880' => 'zma', 'Zm00001eb213920' => 'zma', 'Zm00001eb228280' => 'zma', 'Zm00001eb254580' => 'zma', 'Zm00001eb272180' => 'zma', 'Zm00001eb293190' => 'zma', 'Zm00001eb322930' => 'zma', 'Zm00001eb353360' => 'zma', 'Zm00001eb353390' => 'zma', 'Zm00001eb353430' => 'zma', 'Zm00001eb353440' => 'zma', 'Zm00001eb353780' => 'zma' ), 'gf_id' => 'HOM05D000499', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000499' ), 'data_identifier' => 'HOM05D000499', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000499', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1066', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p29780' => 'bna', 'A02p33180' => 'bna', 'A03p16470' => 'bna', 'A03p66010' => 'bna', 'A04p25970' => 'bna', 'A06p01270' => 'bna', 'A06p46080' => 'bna', 'A07p11400' => 'bna', 'A08p01840' => 'bna', 'A08p08230' => 'bna', 'A08p25740' => 'bna', 'A09p32070' => 'bna', 'A09p37830' => 'bna', 'A09p42840' => 'bna', 'A09p42850' => 'bna', 'Aa31LG10G2060' => 'aar', 'Aa31LG2G7410' => 'aar', 'Aa31LG6G10200' => 'aar', 'Aa31LG6G16680' => 'aar', 'Aa31LG6G8470' => 'aar', 'Aa31LG9G12730' => 'aar', 'Aa31LG9G13680' => 'aar', 'Aa31LG9G14920' => 'aar', 'Aa31LG9G6650' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4977' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5467' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3254' => 'aag', 'Actinidia02578' => 'ach', 'Actinidia07693' => 'ach', 'Actinidia08413' => 'ach', 'Actinidia08414' => 'ach', 'Actinidia15289' => 'ach', 'Actinidia19871' => 'ach', 'Actinidia21475' => 'ach', 'Actinidia22576' => 'ach', 'Actinidia28327' => 'ach', 'Actinidia32491' => 'ach', 'Actinidia39463' => 'ach', 'Actinidia39571' => 'ach', 'Ah.01g013750' => 'amhyb', 'Ah.01g023210' => 'amhyb', 'Ah.04g164850' => 'amhyb', 'Ah.05g178060' => 'amhyb', 'Ah.07g204270' => 'amhyb', 'Ah.07g208480' => 'amhyb', 'Ah.09g237410' => 'amhyb', 'Ah.14g089460' => 'amhyb', 'AL1G41790' => 'aly', 'AL1G49050' => 'aly', 'AL1G53810' => 'aly', 'AL1G61400' => 'aly', 'AL4G18580' => 'aly', 'AL5G12510' => 'aly', 'AL5G12540' => 'aly', 'AL6G43230' => 'aly', 'AL7G10370' => 'aly', 'AL7G19250' => 'aly', 'AL8G12240' => 'aly', 'AL8G18540' => 'aly', 'Aqoxy1G02409' => 'aox', 'Aqoxy2G03993' => 'aox', 'Aqoxy3G03357' => 'aox', 'Aqoxy4G00785' => 'aox', 'Aqoxy5G02598' => 'aox', 'Aqoxy6G00132' => 'aox', 'Aqoxy7G01776' => 'aox', 'Aqoxy7G02316' => 'aox', 'Aqoxy7G03973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.12AFKW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B8730' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27IQR1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3F75VG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3RE0GA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41TCQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.527VTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FIR39' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5W8UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DA38EV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ63HS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H1I32C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HC27T5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4M8AP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7N3CZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9UVDZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LS1NQA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT1D4B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SKC4TM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCFV76' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF9Q1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQWD9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1ZM88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WE07RT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YCK7VH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJE6Q6' => 'arhy', 'AT1G28240' => 'ath', 'AT1G34550' => 'ath', 'AT1G53040' => 'ath', 'AT2G02910' => 'ath', 'AT4G09630' => 'ath', 'AT4G38500' => 'ath', 'AT5G42660' => 'ath', 'AT5G46220' => 'ath', 'ATR0152G026' => 'atr', 'ATR0564G343' => 'atr', 'ATR0706G151' => 'atr', 'ATR0733G207' => 'atr', 'ATR0751G234' => 'atr', 'ATR0807G048' => 'atr', 'ATR1091G084' => 'atr', 'Atru.chr10.1229' => 'acertr', 'Atru.chr10.1230' => 'acertr', 'Atru.chr10.1874' => 'acertr', 'Atru.chr11.1808' => 'acertr', 'Atru.chr13.1795' => 'acertr', 'Atru.chr13.570' => 'acertr', 'Atru.chr2.2608' => 'acertr', 'Atru.chr2.2609' => 'acertr', 'Atru.chr5.3428' => 'acertr', 'Atru.chr8.1171' => 'acertr', 'AUR62004651' => 'cqu', 'AUR62008675' => 'cqu', 'AUR62010014' => 'cqu', 'AUR62013004' => 'cqu', 'AUR62014825' => 'cqu', 'AUR62015015' => 'cqu', 'AUR62015151' => 'cqu', 'AUR62017020' => 'cqu', 'AUR62019422' => 'cqu', 'AUR62023570' => 'cqu', 'AUR62025571' => 'cqu', 'AUR62029098' => 'cqu', 'AUR62033863' => 'cqu', 'AUR62034296' => 'cqu', 'AUR62040075' => 'cqu', 'BcaB02g07334' => 'bca', 'BcaB02g10575' => 'bca', 'BcaB03g12119' => 'bca', 'BcaB03g12120' => 'bca', 'BcaB03g13945' => 'bca', 'BcaB04g17123' => 'bca', 'BcaB04g17867' => 'bca', 'BcaB04g19839' => 'bca', 'BcaB07g30317' => 'bca', 'BcaB07g32432' => 'bca', 'BcaB07g33362' => 'bca', 'BcaB08g36611' => 'bca', 'BcaC01g00028' => 'bca', 'BcaC01g01356' => 'bca', 'BcaC01g02034' => 'bca', 'BcaC01g06051' => 'bca', 'BcaC03g16839' => 'bca', 'BcaC03g17176' => 'bca', 'BcaC05g26829' => 'bca', 'BcaC06g31490' => 'bca', 'BcaC06g35344' => 'bca', 'BcaC06g36570' => 'bca', 'BcaC07g37537' => 'bca', 'BcaC08g43491' => 'bca', 'BcaC08g43773' => 'bca', 'BcaNung00234' => 'bca', 'BcaNung01982' => 'bca', 'BcaNung03707' => 'bca', 'BcaNung06454' => 'bca', 'BolC2t10762H' => 'bol', 'BolC2t11191H' => 'bol', 'BolC3t14322H' => 'bol', 'BolC3t19747H' => 'bol', 'BolC3t21425H' => 'bol', 'BolC4t27800H' => 'bol', 'BolC5t31423H' => 'bol', 'BolC6t35951H' => 'bol', 'BolC6t36282H' => 'bol', 'BolC7t40678H' => 'bol', 'BolC7t40679H' => 'bol', 'BolC7t42222H' => 'bol', 'BolC7t43492H' => 'bol', 'BolC7t46785H' => 'bol', 'BolC8t47853H' => 'bol', 'BolC9t56805H' => 'bol', 'BraA02t08000Z' => 'bra', 'BraA02t08341Z' => 'bra', 'BraA03t10936Z' => 'bra', 'BraA03t15657Z' => 'bra', 'BraA04t18100Z' => 'bra', 'BraA05t20523Z' => 'bra', 'BraA06t23353Z' => 'bra', 'BraA06t27473Z' => 'bra', 'BraA06t27769Z' => 'bra', 'BraA07t28928Z' => 'bra', 'BraA08t32236Z' => 'bra', 'BraA08t32841Z' => 'bra', 'BraA08t34524Z' => 'bra', 'BraA09t38742Z' => 'bra', 'BraA09t39295Z' => 'bra', 'C02p47180' => 'bna', 'C02p50990' => 'bna', 'C03p19360' => 'bna', 'C03p74950' => 'bna', 'C03p91000' => 'bna', 'C04p63260' => 'bna', 'C05p27050' => 'bna', 'C06p08750' => 'bna', 'C06p11490' => 'bna', 'C07p02820' => 'bna', 'C07p17180' => 'bna', 'C07p29440' => 'bna', 'C07p63730' => 'bna', 'C09p39260' => 'bna', 'CAN.G1164.34' => 'can', 'CAN.G1164.39' => 'can', 'CAN.G1530.3' => 'can', 'CAN.G162.61' => 'can', 'CAN.G176.6' => 'can', 'CAN.G289.49' => 'can', 'CAN.G370.21' => 'can', 'CAN.G370.22' => 'can', 'CAN.G371.117' => 'can', 'CAN.G58.37' => 'can', 'CAN.G588.98' => 'can', 'CANSAT21G2266' => 'cansat', 'CANSAT25G2799' => 'cansat', 'CANSAT35G0862' => 'cansat', 'CANSAT35G1704' => 'cansat', 'CANSAT35G1760' => 'cansat', 'CANSAT56G3971' => 'cansat', 'CANSAT56G4116' => 'cansat', 'CANSAT80G1259' => 'cansat', 'CARHR027730' => 'chi', 'CARHR033880' => 'chi', 'CARHR043270' => 'chi', 'CARHR145330' => 'chi', 'CARHR145340' => 'chi', 'CARHR175570' => 'chi', 'CARHR181570' => 'chi', 'CARHR258470' => 'chi', 'CARHR260490' => 'chi', 'CARHR294220' => 'chi', 'Carub.0001s2668' => 'cru', 'Carub.0001s3257' => 'cru', 'Carub.0001s4220' => 'cru', 'Carub.0005s0179' => 'cru', 'Carub.0006s2807' => 'cru', 'Carub.0007s0039' => 'cru', 'Carub.0008s0169' => 'cru', 'Carub.0008s0636' => 'cru', 'Ca_00338_v3' => 'car', 'Ca_00542_v3' => 'car', 'Ca_01844_v3' => 'car', 'Ca_10611_v3' => 'car', 'Ca_13326_v3' => 'car', 'Ca_17944_v3' => 'car', 'Ca_18546_v3' => 'car', 'Ca_24219_v3' => 'car', 'Ca_29972_v3' => 'car', 'CBR_g3681' => 'cbr', 'CBR_g40021' => 'cbr', 'Cc01_g08140' => 'ccan', 'Cc02_g13410' => 'ccan', 'Cc02_g37480' => 'ccan', 'Cc05_g12030' => 'ccan', 'Cc09_g03370' => 'ccan', 'Cc09_g10300' => 'ccan', 'Cc10_g03530' => 'ccan', 'Cc10_g11380' => 'ccan', 'CDE01G0176' => 'cde', 'CDE02G0675' => 'cde', 'CDE02G0942' => 'cde', 'CDE02G1153' => 'cde', 'CDE02G4177' => 'cde', 'CDE04G2117' => 'cde', 'CDE04G2736' => 'cde', 'CDE08G1161' => 'cde', 'CDE09G1238' => 'cde', 'Cfa000467' => 'cfa', 'Cfa000947' => 'cfa', 'Cfa004969' => 'cfa', 'Cfa005284' => 'cfa', 'Cfa008993' => 'cfa', 'Cfa018187' => 'cfa', 'Cfa018454' => 'cfa', 'Cfa020585' => 'cfa', 'Ciclev10000424m.g' => 'ccl', 'Ciclev10003605m.g' => 'ccl', 'Ciclev10007828m.g' => 'ccl', 'Ciclev10014620m.g' => 'ccl', 'Ciclev10015169m.g' => 'ccl', 'Ciclev10018291m.g' => 'ccl', 'Ciclev10028256m.g' => 'ccl', 'Ciclev10033822m.g' => 'ccl', 'CiPaw.05G060300' => 'cil', 'CiPaw.05G085000' => 'cil', 'CiPaw.06G083700' => 'cil', 'CiPaw.06G120300' => 'cil', 'CiPaw.09G060500' => 'cil', 'CiPaw.09G123800' => 'cil', 'CiPaw.11G169700' => 'cil', 'CiPaw.12G118300' => 'cil', 'CiPaw.15G071000' => 'cil', 'CiPaw.15G081900' => 'cil', 'ClCG01G024610' => 'cla', 'ClCG03G006070' => 'cla', 'ClCG05G019250' => 'cla', 'ClCG09G009500' => 'cla', 'ClCG11G008200' => 'cla', 'ClCG11G018080' => 'cla', 'COL.COLO4_17373' => 'col', 'COL.COLO4_22994' => 'col', 'COL.COLO4_26389' => 'col', 'COL.COLO4_27170' => 'col', 'COL.COLO4_31074' => 'col', 'COL.COLO4_31465' => 'col', 'COL.COLO4_36438' => 'col', 'COL.COLO4_36439' => 'col', 'Cpa.g.c38781' => 'cpa', 'Cpa.g.sc128.12' => 'cpa', 'Cpa.g.sc166.7' => 'cpa', 'Cpa.g.sc166.8' => 'cpa', 'Cpa.g.sc20.111' => 'cpa', 'Cpa.g.sc27.31' => 'cpa', 'Cpa.g.sc64.36' => 'cpa', 'Cpa.g.sc64.37' => 'cpa', 'Cpa.g.sc66.49' => 'cpa', 'Cpa.g.sc80.64' => 'cpa', 'CsaV3_1G012320' => 'csa', 'CsaV3_2G008480' => 'csa', 'CsaV3_2G033450' => 'csa', 'CsaV3_3G044830' => 'csa', 'CsaV3_4G033710' => 'csa', 'CsaV3_6G051730' => 'csa', 'CsaV3_7G025350' => 'csa', 'CSS0001067' => 'camsi', 'CSS0005996' => 'camsi', 'CSS0006590' => 'camsi', 'CSS0009673' => 'camsi', 'CSS0010201' => 'camsi', 'CSS0010549' => 'camsi', 'CSS0011364' => 'camsi', 'CSS0014473' => 'camsi', 'CSS0014961' => 'camsi', 'CSS0020191' => 'camsi', 'CSS0021165' => 'camsi', 'CSS0022306' => 'camsi', 'CSS0030591' => 'camsi', 'CSS0030696' => 'camsi', 'CSS0032653' => 'camsi', 'CSS0037487' => 'camsi', 'CSS0041102' => 'camsi', 'CSS0041261' => 'camsi', 'CSS0046246' => 'camsi', 'CSS0049256' => 'camsi', 'DCAR_004075' => 'dca', 'DCAR_011538' => 'dca', 'DCAR_019553' => 'dca', 'DCAR_020952' => 'dca', 'DCAR_021739' => 'dca', 'DCAR_027407' => 'dca', 'DCAR_027913' => 'dca', 'DCAR_028066' => 'dca', 'Dinv05899' => 'din', 'Dinv07563' => 'din', 'Dinv08010' => 'din', 'Dinv14125' => 'din', 'Dinv20172' => 'din', 'Dinv30743' => 'din', 'Dinv31229' => 'din', 'Dinv34162' => 'din', 'Dinv36028' => 'din', 'Dinv39368' => 'din', 'Dinv40565' => 'din', 'Dinv41706' => 'din', 'Duzib052G0089' => 'dzi', 'Duzib116G0641' => 'dzi', 'Duzib132G0069' => 'dzi', 'Duzib132G1219' => 'dzi', 'Duzib147G0278' => 'dzi', 'Duzib160G0480' => 'dzi', 'Duzib170G0661' => 'dzi', 'Duzib177G0591' => 'dzi', 'Duzib187G1353' => 'dzi', 'Duzib192G0858' => 'dzi', 'Duzib192G0883' => 'dzi', 'Duzib213G0506' => 'dzi', 'Duzib235G0289' => 'dzi', 'Duzib251G0422' => 'dzi', 'ECA232G3898' => 'eca', 'ECA233G5950' => 'eca', 'ECA234G1699' => 'eca', 'ECA234G2421' => 'eca', 'ECA236G0426' => 'eca', 'ECA236G4331' => 'eca', 'ECA248G2573' => 'eca', 'EL10Ac1g00077' => 'bvu', 'EL10Ac1g01746' => 'bvu', 'EL10Ac2g03464' => 'bvu', 'EL10Ac4g08176' => 'bvu', 'EL10Ac7g17521' => 'bvu', 'EL10Ac8g20386' => 'bvu', 'EL10Ac9g21343' => 'bvu', 'EL10Ac9g22688' => 'bvu', 'Eucgr.B03434' => 'egr', 'Eucgr.D00618' => 'egr', 'Eucgr.E02395' => 'egr', 'Eucgr.F01129' => 'egr', 'Eucgr.F02622' => 'egr', 'Eucgr.F04207' => 'egr', 'FAN01G0570' => 'fan', 'FAN03G3351' => 'fan', 'FAN06G3702' => 'fan', 'FAN07G2149' => 'fan', 'FAN10G3758' => 'fan', 'FAN11G1170' => 'fan', 'FAN11G2050' => 'fan', 'FAN11G2724' => 'fan', 'FAN12G1700' => 'fan', 'FAN12G2028' => 'fan', 'FAN15G1160' => 'fan', 'FAN15G3063' => 'fan', 'FAN16G2540' => 'fan', 'FAN16G3077' => 'fan', 'FAN16G3624' => 'fan', 'FAN17G0221' => 'fan', 'FAN20G2492' => 'fan', 'FAN20G2905' => 'fan', 'FAN21G0548' => 'fan', 'FAN21G1300' => 'fan', 'FAN22G0077' => 'fan', 'FAN22G1315' => 'fan', 'FAN24G1280' => 'fan', 'FAN24G1445' => 'fan', 'FAN24G3527' => 'fan', 'FAN25G0464' => 'fan', 'FAN25G2885' => 'fan', 'FAN25G3270' => 'fan', 'FAN27G1101' => 'fan', 'FAN27G2846' => 'fan', 'FAN27G3524' => 'fan', 'FvH4_2g11770' => 'fve', 'FvH4_2g15630' => 'fve', 'FvH4_3g05570' => 'fve', 'FvH4_3g09110' => 'fve', 'FvH4_3g19940' => 'fve', 'FvH4_4g04821' => 'fve', 'FvH4_4g31480' => 'fve', 'FvH4_7g01740' => 'fve', 'Glyma.05G130400' => 'gma', 'Glyma.05G156400' => 'gma', 'Glyma.07G197000' => 'gma', 'Glyma.08G085151' => 'gma', 'Glyma.08G114500' => 'gma', 'Glyma.08G300400' => 'gma', 'Glyma.10G215800' => 'gma', 'Glyma.12G224400' => 'gma', 'Glyma.13G179300' => 'gma', 'Glyma.13G218151' => 'gma', 'Glyma.13G238800' => 'gma', 'Glyma.13G276900' => 'gma', 'Glyma.14G078200' => 'gma', 'Glyma.15G074500' => 'gma', 'Glyma.15G094100' => 'gma', 'Glyma.17G247200' => 'gma', 'Glyma.18G120100' => 'gma', 'Glyma.20G176000' => 'gma', 'Gohir.A01G063600' => 'ghi', 'Gohir.A01G170301' => 'ghi', 'Gohir.A02G060500' => 'ghi', 'Gohir.A05G133850' => 'ghi', 'Gohir.A05G161400' => 'ghi', 'Gohir.A06G012900' => 'ghi', 'Gohir.A06G035901' => 'ghi', 'Gohir.A06G127100' => 'ghi', 'Gohir.A06G210500' => 'ghi', 'Gohir.A08G008650' => 'ghi', 'Gohir.A09G072700' => 'ghi', 'Gohir.A09G088301' => 'ghi', 'Gohir.A10G040600' => 'ghi', 'Gohir.A12G036300' => 'ghi', 'Gohir.A12G143350' => 'ghi', 'Gohir.A12G165500' => 'ghi', 'Gohir.A13G145700' => 'ghi', 'Gohir.D01G050000' => 'ghi', 'Gohir.D01G051366' => 'ghi', 'Gohir.D01G161350' => 'ghi', 'Gohir.D02G065900' => 'ghi', 'Gohir.D05G164200' => 'ghi', 'Gohir.D05G355500' => 'ghi', 'Gohir.D06G010400' => 'ghi', 'Gohir.D06G111250' => 'ghi', 'Gohir.D06G132000' => 'ghi', 'Gohir.D06G210500' => 'ghi', 'Gohir.D07G165675' => 'ghi', 'Gohir.D08G062240' => 'ghi', 'Gohir.D08G086101' => 'ghi', 'Gohir.D08G138060' => 'ghi', 'Gohir.D09G072300' => 'ghi', 'Gohir.D10G041400' => 'ghi', 'Gohir.D11G191020' => 'ghi', 'Gohir.D11G212066' => 'ghi', 'Gohir.D12G036300' => 'ghi', 'Gohir.D12G168600' => 'ghi', 'Gohir.D13G150600' => 'ghi', 'Gorai.001G057300' => 'gra', 'Gorai.002G069900' => 'gra', 'Gorai.002G200000' => 'gra', 'Gorai.003G067600' => 'gra', 'Gorai.005G074800' => 'gra', 'Gorai.006G087300' => 'gra', 'Gorai.008G037500' => 'gra', 'Gorai.008G181400' => 'gra', 'Gorai.009G169400' => 'gra', 'Gorai.009G387900' => 'gra', 'Gorai.010G013300' => 'gra', 'Gorai.010G153800' => 'gra', 'Gorai.010G255800' => 'gra', 'Gorai.011G043700' => 'gra', 'Gorai.011G198900' => 'gra', 'Gorai.013G168400' => 'gra', 'GSVIVG01005212001' => 'vvi', 'GSVIVG01006163001' => 'vvi', 'GSVIVG01009625001' => 'vvi', 'GSVIVG01014338001' => 'vvi', 'GSVIVG01020005001' => 'vvi', 'GSVIVG01021450001' => 'vvi', 'GSVIVG01023975001' => 'vvi', 'GSVIVG01034490001' => 'vvi', 'HanXRQChr04g0112071' => 'han', 'HanXRQChr05g0131151' => 'han', 'HanXRQChr09g0262371' => 'han', 'HanXRQChr09g0268401' => 'han', 'HanXRQChr10g0279241' => 'han', 'HanXRQChr10g0297961' => 'han', 'HanXRQChr11g0326231' => 'han', 'HanXRQChr11g0328471' => 'han', 'HanXRQChr16g0507941' => 'han', 'HanXRQChr17g0560211' => 'han', 'Haze_02108' => 'cav', 'Haze_02428' => 'cav', 'Haze_05593' => 'cav', 'Haze_06448' => 'cav', 'Haze_09427' => 'cav', 'Haze_12022' => 'cav', 'Haze_17612' => 'cav', 'Haze_17928' => 'cav', 'Hma1.2p1_0032F.1_g019250' => 'hma', 'Hma1.2p1_0163F.1_g072690' => 'hma', 'Hma1.2p1_0265F.1_g106710' => 'hma', 'Hma1.2p1_0286F.1_g113970' => 'hma', 'Hma1.2p1_0363F.1_g136640' => 'hma', 'Hma1.2p1_0584F.1_g183470' => 'hma', 'Hma1.2p1_0885F.1_g232570' => 'hma', 'HPP92_006022' => 'vpl', 'HPP92_007320' => 'vpl', 'HPP92_011521' => 'vpl', 'HPP92_019387' => 'vpl', 'HPP92_024038' => 'vpl', 'Hund05891' => 'sun', 'Hund06450' => 'sun', 'Hund12053' => 'sun', 'Hund16800' => 'sun', 'Hund21222' => 'sun', 'Hund22896' => 'sun', 'Hund23746' => 'sun', 'Hund27083' => 'sun', 'Lalb_Chr02g0141831' => 'lal', 'Lalb_Chr02g0141841' => 'lal', 'Lalb_Chr05g0220411' => 'lal', 'Lalb_Chr06g0162081' => 'lal', 'Lalb_Chr09g0327651' => 'lal', 'Lalb_Chr13g0295051' => 'lal', 'Lalb_Chr15g0086801' => 'lal', 'Lalb_Chr16g0383781' => 'lal', 'Lalb_Chr16g0383791' => 'lal', 'Lalb_Chr18g0055441' => 'lal', 'Lalb_Chr18g0059611' => 'lal', 'Lalb_Chr20g0109661' => 'lal', 'Lalb_Chr20g0109831' => 'lal', 'Lalb_Chr20g0121871' => 'lal', 'Lalb_Chr22g0355361' => 'lal', 'Lalb_Chr25g0286371' => 'lal', 'Lj1A1187G43' => 'lonja', 'Lj1A1205T50' => 'lonja', 'Lj1A800G33' => 'lonja', 'Lj1C1187T7' => 'lonja', 'Lj1C843T11' => 'lonja', 'Lj1g0010940' => 'lja', 'Lj2A288T69' => 'lonja', 'Lj3g0024276' => 'lja', 'Lj4A47T76' => 'lonja', 'Lj4g0005805' => 'lja', 'Lj4g0006097' => 'lja', 'Lj4g0008528' => 'lja', 'Lj4g0024907' => 'lja', 'Lj5g0012472' => 'lja', 'Lj5g0018648' => 'lja', 'Lj6C789G1' => 'lonja', 'Lj6g0004000' => 'lja', 'Lj7A292G67' => 'lonja', 'Lj7A292T64' => 'lonja', 'Lj9A400T58' => 'lonja', 'Lsat_1_v5_gn_1_126181' => 'lsa', 'Lsat_1_v5_gn_4_123041' => 'lsa', 'Lsat_1_v5_gn_4_133620' => 'lsa', 'Lsat_1_v5_gn_4_53221' => 'lsa', 'Lsat_1_v5_gn_4_71961' => 'lsa', 'Lsat_1_v5_gn_7_105241' => 'lsa', 'Lsat_1_v5_gn_7_21361' => 'lsa', 'Lsat_1_v5_gn_7_28860' => 'lsa', 'Lsat_1_v5_gn_7_31260' => 'lsa', 'Lsat_1_v5_gn_8_52801' => 'lsa', 'Manes.02G191400' => 'mes', 'Manes.03G110100' => 'mes', 'Manes.04G071100' => 'mes', 'Manes.05G100500' => 'mes', 'Manes.05G164700' => 'mes', 'Manes.15G087000' => 'mes', 'Manes.15G121500' => 'mes', 'Manes.16G028300' => 'mes', 'Manes.17G046100' => 'mes', 'Manes.17G069800' => 'mes', 'Manes.18G100500' => 'mes', 'Mapoly0002s0109' => 'mpo', 'Mapoly0024s0007' => 'mpo', 'Mapoly0089s0032' => 'mpo', 'MBI04_g42241_MAGBIO' => 'mbi', 'MBI05_g11988_MAGBIO' => 'mbi', 'MBI05_g35452_MAGBIO' => 'mbi', 'MBI07_g30179_MAGBIO' => 'mbi', 'MBI07_g35859_MAGBIO' => 'mbi', 'MBI07_g35860_MAGBIO' => 'mbi', 'MBI07_g37166_MAGBIO' => 'mbi', 'MBI08_g18172_MAGBIO' => 'mbi', 'MBI09_g08441_MAGBIO' => 'mbi', 'MBI13_g01676_MAGBIO' => 'mbi', 'MBI14_g42955_MAGBIO' => 'mbi', 'MBI16_g13161_MAGBIO' => 'mbi', 'MBI17_g27204_MAGBIO' => 'mbi', 'MBI19_g21595_MAGBIO' => 'mbi', 'MD00G1148400' => 'mdo', 'MD02G1301200' => 'mdo', 'MD03G1227800' => 'mdo', 'MD05G1041100' => 'mdo', 'MD05G1124800' => 'mdo', 'MD05G1284000' => 'mdo', 'MD05G1338800' => 'mdo', 'MD05G1338900' => 'mdo', 'MD07G1022800' => 'mdo', 'MD10G1047500' => 'mdo', 'MD10G1127500' => 'mdo', 'MD10G1262300' => 'mdo', 'MD10G1293800' => 'mdo', 'MD16G1074300' => 'mdo', 'Medtr1g021670' => 'mtr', 'Medtr1g096320' => 'mtr', 'Medtr2g013690' => 'mtr', 'Medtr2g019450' => 'mtr', 'Medtr2g085170' => 'mtr', 'Medtr4g088785' => 'mtr', 'Medtr8g055930' => 'mtr', 'Medtr8g085850' => 'mtr', 'MELO3C002605.2' => 'cme', 'MELO3C003891.2' => 'cme', 'MELO3C004012.2' => 'cme', 'MELO3C007134.2' => 'cme', 'MELO3C008118.2' => 'cme', 'MELO3C016700.2' => 'cme', 'MELO3C024127.2' => 'cme', 'MELO3C033361.2' => 'cme', 'MELO3C033362.2' => 'cme', 'Migut.C00430' => 'egut', 'Migut.C01246' => 'egut', 'Migut.E00101' => 'egut', 'Migut.H01486' => 'egut', 'Migut.H01939' => 'egut', 'Migut.K00360' => 'egut', 'Migut.M00910' => 'egut', 'Migut.M01139' => 'egut', 'Migut.N02677' => 'egut', 'MSTRG.13252' => 'ama', 'MSTRG.14701' => 'ama', 'MSTRG.1521' => 'ama', 'MSTRG.15884' => 'ama', 'MSTRG.16242' => 'ama', 'MSTRG.22285' => 'ama', 'MSTRG.22444' => 'ama', 'MSTRG.2349' => 'ama', 'MSTRG.26308' => 'ama', 'MSTRG.28296' => 'ama', 'MSTRG.9895' => 'ama', 'Nitab4.5_0000110g0060' => 'nta', 'Nitab4.5_0000420g0130' => 'nta', 'Nitab4.5_0000422g0030' => 'nta', 'Nitab4.5_0000560g0180' => 'nta', 'Nitab4.5_0000703g0100' => 'nta', 'Nitab4.5_0000786g0200' => 'nta', 'Nitab4.5_0001336g0020' => 'nta', 'Nitab4.5_0001796g0030' => 'nta', 'Nitab4.5_0003348g0060' => 'nta', 'Nitab4.5_0003698g0040' => 'nta', 'Nitab4.5_0003942g0090' => 'nta', 'Nitab4.5_0004775g0070' => 'nta', 'Nitab4.5_0004864g0030' => 'nta', 'Nitab4.5_0005615g0020' => 'nta', 'Nitab4.5_0009288g0030' => 'nta', 'Nitab4.5_0009341g0010' => 'nta', 'Nitab4.5_0009535g0010' => 'nta', 'Nn1g03995' => 'nnu', 'Nn1g04100' => 'nnu', 'Nn1g06530' => 'nnu', 'Nn3g16404' => 'nnu', 'Nn3g17212' => 'nnu', 'Nn3g20776' => 'nnu', 'Nn3g21923' => 'nnu', 'Nn5g27737' => 'nnu', 'Nn5g29461' => 'nnu', 'Nn7g38355' => 'nnu', 'Nn8g39873' => 'nnu', 'Oeu000548.2' => 'oeu', 'Oeu004672.1' => 'oeu', 'Oeu015605.2' => 'oeu', 'Oeu016092.1' => 'oeu', 'Oeu017879.3' => 'oeu', 'Oeu024910.1' => 'oeu', 'Oeu028965.1' => 'oeu', 'Oeu031269.1' => 'oeu', 'Oeu031270.1' => 'oeu', 'Oeu032535.1' => 'oeu', 'Oeu034151.1' => 'oeu', 'Oeu034152.1' => 'oeu', 'Oeu034588.2' => 'oeu', 'Oeu050846.1' => 'oeu', 'Oeu050849.2' => 'oeu', 'Oeu051063.2' => 'oeu', 'Oeu052368.1' => 'oeu', 'Oeu052370.1' => 'oeu', 'Os01g0210400' => 'osa', 'Os01g0304300' => 'osa', 'Os01g0749100' => 'osa', 'Os02g0745800' => 'osa', 'Os03g0769050' => 'osa', 'Os05g0531500' => 'osa', 'Os06g0724300' => 'osa', 'Os11g0198100' => 'osa', 'Peaxi162Scf00069g01425' => 'pax', 'Peaxi162Scf00280g00811' => 'pax', 'Peaxi162Scf00310g00615' => 'pax', 'Peaxi162Scf00362g00542' => 'pax', 'Peaxi162Scf00461g00310' => 'pax', 'Peaxi162Scf00530g00118' => 'pax', 'Peaxi162Scf00541g00057' => 'pax', 'Peaxi162Scf00661g00017' => 'pax', 'Peaxi162Scf00926g00027' => 'pax', 'Peaxi162Scf01064g00263' => 'pax', 'Peaxi162Scf01211g00135' => 'pax', 'PGR004G2336' => 'pgr', 'PGR042G0327' => 'pgr', 'PGR042G1957' => 'pgr', 'PGR042G2003' => 'pgr', 'PGR042G3929' => 'pgr', 'PGR083G1137' => 'pgr', 'PGR083G1364' => 'pgr', 'PGSC0003DMG400003381' => 'stu', 'PGSC0003DMG400003417' => 'stu', 'PGSC0003DMG400008981' => 'stu', 'PGSC0003DMG400012417' => 'stu', 'PGSC0003DMG400012823' => 'stu', 'PGSC0003DMG400016885' => 'stu', 'PGSC0003DMG400022812' => 'stu', 'PGSC0003DMG400029726' => 'stu', 'PGSC0003DMG401009243' => 'stu', 'PGSC0003DMG401031505' => 'stu', 'PGSC0003DMG402031505' => 'stu', 'Phvul.001G017600' => 'pvu', 'Phvul.002G193500' => 'pvu', 'Phvul.002G228900' => 'pvu', 'Phvul.002G236800' => 'pvu', 'Phvul.003G049500' => 'pvu', 'Phvul.005G072000' => 'pvu', 'Phvul.006G164800' => 'pvu', 'Phvul.006G185100' => 'pvu', 'Phvul.007G090000' => 'pvu', 'Potri.001G399800' => 'ptr', 'Potri.002G149900' => 'ptr', 'Potri.004G044100' => 'ptr', 'Potri.004G177600' => 'ptr', 'Potri.009G138000' => 'ptr', 'Potri.010G094000' => 'ptr', 'Potri.011G053000' => 'ptr', 'Potri.011G119300' => 'ptr', 'Potri.013G113700' => 'ptr', 'Potri.018G107800' => 'ptr', 'Potri.019G084100' => 'ptr', 'Pp3c14_23720' => 'ppa', 'Pp3c16_6340' => 'ppa', 'Pp3c23_13420' => 'ppa', 'Pp3c24_2740' => 'ppa', 'Pp3c25_860' => 'ppa', 'Pp3c8_21750' => 'ppa', 'Prupe.1G273000' => 'ppe', 'Prupe.1G273700' => 'ppe', 'Prupe.1G274100' => 'ppe', 'Prupe.2G023300' => 'ppe', 'Prupe.4G048000' => 'ppe', 'Prupe.4G080400' => 'ppe', 'Prupe.4G181200' => 'ppe', 'Prupe.8G056900' => 'ppe', 'Prupe.8G168700' => 'ppe', 'Psat1g189080' => 'psa', 'Psat1g204760' => 'psa', 'Psat4g175560' => 'psa', 'Psat4g177720' => 'psa', 'Psat5g244240' => 'psa', 'Psat6g010720' => 'psa', 'Psat6g187200' => 'psa', 'Psat7g072040' => 'psa', 'PSO017G3501' => 'pso', 'PSO063G2148' => 'pso', 'PSO063G5608' => 'pso', 'PSO210G6392' => 'pso', 'PSO541G2319' => 'pso', 'PSO541G2836' => 'pso', 'PSO541G4012' => 'pso', 'PSO541G6253' => 'pso', 'PSO675G0580' => 'pso', 'PSO675G0856' => 'pso', 'PSO675G5635' => 'pso', 'PSO675G9157' => 'pso', 'PSO832G1660' => 'pso', 'PSO832G1969' => 'pso', 'QL02p007186' => 'qlo', 'QL02p033904' => 'qlo', 'QL03p064391' => 'qlo', 'QL05p040593' => 'qlo', 'QL05p058242' => 'qlo', 'QL08p021825' => 'qlo', 'QL11p004981' => 'qlo', 'RcHm_v2.0_Chr1g0318301' => 'rch', 'RcHm_v2.0_Chr4g0418501' => 'rch', 'RcHm_v2.0_Chr4g0439971' => 'rch', 'RcHm_v2.0_Chr5g0008541' => 'rch', 'RcHm_v2.0_Chr5g0014101' => 'rch', 'RcHm_v2.0_Chr5g0014131' => 'rch', 'RcHm_v2.0_Chr5g0033621' => 'rch', 'RcHm_v2.0_Chr6g0272041' => 'rch', 'RcHm_v2.0_Chr6g0278831' => 'rch', 'Rhsim02G0130400' => 'rsi', 'Rhsim02G0171100' => 'rsi', 'Rhsim05G0053000' => 'rsi', 'Rhsim05G0053100' => 'rsi', 'Rhsim06G0096500' => 'rsi', 'Rhsim06G0096600' => 'rsi', 'Rhsim06G0199100' => 'rsi', 'Rhsim12G0062300' => 'rsi', 'Rhsim12G0062800' => 'rsi', 'Sabra02G0118600' => 'sbr', 'Sabra04G0027300' => 'sbr', 'Sabra04G0119500' => 'sbr', 'Sabra08G0112500' => 'sbr', 'Sabra11G0036800' => 'sbr', 'Sabra11G0103800' => 'sbr', 'Sabra13G0096300' => 'sbr', 'Sabra16G0262300' => 'sbr', 'Sabra18G0091700' => 'sbr', 'Sabra19G0095400' => 'sbr', 'SalBow6G3080' => 'sbo', 'SalBow7G1157' => 'sbo', 'SalBow7G2123' => 'sbo', 'SalBow7G2285' => 'sbo', 'SalBow7G3537' => 'sbo', 'SalBow8G2947' => 'sbo', 'SalBow8G4463' => 'sbo', 'SalBow8G5466' => 'sbo', 'Sc01g0001750' => 'sci', 'Sc02g0006640' => 'sci', 'Sc02g0006670' => 'sci', 'Sc04g0008220' => 'sci', 'Sc05g0006190' => 'sci', 'Sc08g0002760' => 'sci', 'Sc17g0006170' => 'sci', 'Sc22g0002050' => 'sci', 'Sc23g0001190' => 'sci', 'Sc24g0000980' => 'sci', 'Sed0006245' => 'sed', 'Sed0007543' => 'sed', 'Sed0009411' => 'sed', 'Sed0010765' => 'sed', 'Sed0012944' => 'sed', 'Sed0014682' => 'sed', 'Sed0016174' => 'sed', 'Sed0016796' => 'sed', 'Sed0020317' => 'sed', 'Sed0021467' => 'sed', 'SEGI_01316' => 'sgi', 'SEGI_03374' => 'sgi', 'SEGI_16265' => 'sgi', 'SEGI_18569' => 'sgi', 'SEGI_20351' => 'sgi', 'SEGI_26395' => 'sgi', 'SEGI_29469' => 'sgi', 'SEGI_34771' => 'sgi', 'SEGI_36769' => 'sgi', 'SEGI_37139' => 'sgi', 'SGA_v2.0_scaffold100G29687' => 'sas', 'SGA_v2.0_scaffold118G32472' => 'sas', 'SGA_v2.0_scaffold14G07051' => 'sas', 'SGA_v2.0_scaffold183G39845' => 'sas', 'SGA_v2.0_scaffold1G00174' => 'sas', 'SGA_v2.0_scaffold22G09714' => 'sas', 'SGA_v2.0_scaffold333G48992' => 'sas', 'SGA_v2.0_scaffold46G17491' => 'sas', 'SGA_v2.0_scaffold49G18294' => 'sas', 'SGA_v2.0_scaffold63G21658' => 'sas', 'SHI01741' => 'shi', 'SHI05771' => 'shi', 'SHI18077' => 'shi', 'SHI20525' => 'shi', 'SHI20527' => 'shi', 'SHI20528' => 'shi', 'SMO172G0185' => 'smo', 'SMO198G0020' => 'smo', 'SMO351G0006' => 'smo', 'SMO356G0118' => 'smo', 'SMO358G0296' => 'smo', 'SMO367G0079' => 'smo', 'SMO367G1277' => 'smo', 'Solyc01g014220.3' => 'sly', 'Solyc01g111770.2' => 'sly', 'Solyc02g078180.3' => 'sly', 'Solyc03g006430.3' => 'sly', 'Solyc03g006456.1' => 'sly', 'Solyc03g079860.2' => 'sly', 'Solyc04g079770.3' => 'sly', 'Solyc05g007430.4' => 'sly', 'Solyc07g063150.3' => 'sly', 'Solyc08g016620.3' => 'sly', 'Solyc09g057590.3' => 'sly', 'Solyc09g057600.1' => 'sly', 'Solyc10g009050.3' => 'sly', 'Solyc11g017420.2' => 'sly', 'Sopen01g053810' => 'spe', 'Sopen02g023040' => 'spe', 'Sopen03g002440' => 'spe', 'Sopen04g033350' => 'spe', 'Sopen05g003310' => 'spe', 'Sopen07g004050' => 'spe', 'Sopen07g031340' => 'spe', 'Sopen08g006990' => 'spe', 'Sopen10g004830' => 'spe', 'Sopen11g009370' => 'spe', 'Sp1g24450' => 'spa', 'Sp1g29670' => 'spa', 'Sp1g39600' => 'spa', 'Sp2g11080' => 'spa', 'Sp2g13970' => 'spa', 'Sp4g16130' => 'spa', 'Sp6g13080' => 'spa', 'Sp7g37270' => 'spa', 'TAR371G0065' => 'tar', 'TAR376G0340' => 'tar', 'TAR376G0435' => 'tar', 'TAR381G0002' => 'tar', 'TAR381G1236' => 'tar', 'TAR624G0055' => 'tar', 'TAR624G0324' => 'tar', 'TAR624G0696' => 'tar', 'TAR624G0906' => 'tar', 'TAR625G0107' => 'tar', 'TAR626G0015' => 'tar', 'TAR626G1356' => 'tar', 'TAR627G0888' => 'tar', 'TAR628G0399' => 'tar', 'TAR628G1327' => 'tar', 'TAR629G2831' => 'tar', 'TAR629G2874' => 'tar', 'TAR633G1432' => 'tar', 'TAR633G2771' => 'tar', 'THA.LOC104803394' => 'tha', 'THA.LOC104805153' => 'tha', 'THA.LOC104806784' => 'tha', 'THA.LOC104810473' => 'tha', 'THA.LOC104813100' => 'tha', 'THA.LOC104814215' => 'tha', 'THA.LOC104815554' => 'tha', 'THA.LOC104820544' => 'tha', 'THA.LOC104824754' => 'tha', 'THA.LOC104827717' => 'tha', 'Thecc.02G031400' => 'tca', 'Thecc.02G055900' => 'tca', 'Thecc.02G350800' => 'tca', 'Thecc.06G150900' => 'tca', 'Thecc.06G186600' => 'tca', 'Thecc.07G089600' => 'tca', 'Thecc.08G020400' => 'tca', 'Thecc.08G182100' => 'tca', 'Thhalv10000873m.g' => 'esa', 'Thhalv10004185m.g' => 'esa', 'Thhalv10006981m.g' => 'esa', 'Thhalv10007204m.g' => 'esa', 'Thhalv10011374m.g' => 'esa', 'Thhalv10013482m.g' => 'esa', 'Thhalv10017801m.g' => 'esa', 'Thhalv10024983m.g' => 'esa', 'TPR.G12072' => 'tpr', 'TPR.G15769' => 'tpr', 'TPR.G16504' => 'tpr', 'TPR.G16506' => 'tpr', 'TPR.G24345' => 'tpr', 'TPR.G26666' => 'tpr', 'TPR.G27320' => 'tpr', 'TPR.G31819' => 'tpr', 'TPR.G38879' => 'tpr', 'TPR.G39015' => 'tpr', 'TPR.G8819' => 'tpr', 'TWI09G0924' => 'twi', 'TWI12G0811' => 'twi', 'TWI12G1294' => 'twi', 'TWI31G0150' => 'twi', 'TWI36G1262' => 'twi', 'TWI38G1287' => 'twi', 'TWI38G1633' => 'twi', 'TWI38G1982' => 'twi', 'TWI39G0116' => 'twi', 'TWI60G1011' => 'twi', 'TWI63G0171' => 'twi', 'TWI73G0839' => 'twi', 'TWI79G1511' => 'twi', 'unitig_0.g915' => 'ugi', 'unitig_0.g916' => 'ugi', 'unitig_21.g20219' => 'ugi', 'unitig_21.g20416' => 'ugi', 'unitig_578.g16132' => 'ugi', 'unitig_578.g16718' => 'ugi', 'unitig_62.g23481' => 'ugi', 'unitig_744.g24535' => 'ugi', 'unitig_749.g13525' => 'ugi', 'vmacro01248' => 'vma', 'vmacro02290' => 'vma', 'vmacro10946' => 'vma', 'vmacro11865' => 'vma', 'vmacro12493' => 'vma', 'vmacro17322' => 'vma', 'vmacro21599' => 'vma', 'vmacro23041' => 'vma', 'VMungo0251G0004' => 'vmu', 'VMungo0251G2639' => 'vmu', 'VMungo0251G2967' => 'vmu', 'VMungo0540G0864' => 'vmu', 'VMungo0540G1569' => 'vmu', 'VMungo0647G0317' => 'vmu', 'VMungo0720G1373' => 'vmu', 'VMungo0720G1508' => 'vmu', 'VMungo1080G0485' => 'vmu', 'VMungo1215G3177' => 'vmu', 'Zm00001eb112600' => 'zma', 'Zm00001eb120220' => 'zma', 'Zm00001eb153240' => 'zma', 'Zm00001eb168880' => 'zma', 'Zm00001eb213920' => 'zma', 'Zm00001eb228280' => 'zma', 'Zm00001eb254580' => 'zma', 'Zm00001eb272180' => 'zma', 'Zm00001eb293190' => 'zma', 'Zm00001eb322930' => 'zma', 'Zm00001eb353360' => 'zma', 'Zm00001eb353390' => 'zma', 'Zm00001eb353430' => 'zma', 'Zm00001eb353440' => 'zma', 'Zm00001eb353780' => 'zma' ) $gf_id = 'HOM05D000499' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000499' ) $data_identifier = 'HOM05D000499' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 29, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 12, 'amhyb' => (int) 8, 'aly' => (int) 12, 'aox' => (int) 9, 'arhy' => (int) 26, 'ath' => (int) 8, 'atr' => (int) 7, 'acertr' => (int) 10, 'cqu' => (int) 15, 'bca' => (int) 29, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 11, 'cansat' => (int) 8, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 9, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 8, 'cpa' => (int) 10, 'csa' => (int) 7, 'camsi' => (int) 20, 'dca' => (int) 8, 'din' => (int) 12, 'dzi' => (int) 14, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 6, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 38, 'gra' => (int) 16, 'vvi' => (int) 8, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 5, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 11, 'lja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 11, 'mpo' => (int) 3, 'mbi' => (int) 14, 'mdo' => (int) 14, 'mtr' => (int) 8, 'cme' => (int) 9, 'egut' => (int) 9, 'ama' => (int) 11, 'nta' => (int) 17, 'nnu' => (int) 11, 'oeu' => (int) 18, 'osa' => (int) 8, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 6, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 9, 'rsi' => (int) 9, 'sbr' => (int) 10, 'sbo' => (int) 8, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 10, 'sas' => (int) 10, 'shi' => (int) 6, 'smo' => (int) 7, 'sly' => (int) 14, 'spe' => (int) 10, 'spa' => (int) 8, 'tar' => (int) 19, 'tha' => (int) 10, 'tca' => (int) 8, 'esa' => (int) 8, 'tpr' => (int) 11, 'twi' => (int) 13, 'ugi' => (int) 9, 'vma' => (int) 8, 'vmu' => (int) 10, 'zma' => (int) 15 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb353780' $species_info = array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ) $local_species = 'cfa' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000499', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1066', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p29780' => 'bna', 'A02p33180' => 'bna', 'A03p16470' => 'bna', 'A03p66010' => 'bna', 'A04p25970' => 'bna', 'A06p01270' => 'bna', 'A06p46080' => 'bna', 'A07p11400' => 'bna', 'A08p01840' => 'bna', 'A08p08230' => 'bna', 'A08p25740' => 'bna', 'A09p32070' => 'bna', 'A09p37830' => 'bna', 'A09p42840' => 'bna', 'A09p42850' => 'bna', 'Aa31LG10G2060' => 'aar', 'Aa31LG2G7410' => 'aar', 'Aa31LG6G10200' => 'aar', 'Aa31LG6G16680' => 'aar', 'Aa31LG6G8470' => 'aar', 'Aa31LG9G12730' => 'aar', 'Aa31LG9G13680' => 'aar', 'Aa31LG9G14920' => 'aar', 'Aa31LG9G6650' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4977' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5467' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3254' => 'aag', 'Actinidia02578' => 'ach', 'Actinidia07693' => 'ach', 'Actinidia08413' => 'ach', 'Actinidia08414' => 'ach', 'Actinidia15289' => 'ach', 'Actinidia19871' => 'ach', 'Actinidia21475' => 'ach', 'Actinidia22576' => 'ach', 'Actinidia28327' => 'ach', 'Actinidia32491' => 'ach', 'Actinidia39463' => 'ach', 'Actinidia39571' => 'ach', 'Ah.01g013750' => 'amhyb', 'Ah.01g023210' => 'amhyb', 'Ah.04g164850' => 'amhyb', 'Ah.05g178060' => 'amhyb', 'Ah.07g204270' => 'amhyb', 'Ah.07g208480' => 'amhyb', 'Ah.09g237410' => 'amhyb', 'Ah.14g089460' => 'amhyb', 'AL1G41790' => 'aly', 'AL1G49050' => 'aly', 'AL1G53810' => 'aly', 'AL1G61400' => 'aly', 'AL4G18580' => 'aly', 'AL5G12510' => 'aly', 'AL5G12540' => 'aly', 'AL6G43230' => 'aly', 'AL7G10370' => 'aly', 'AL7G19250' => 'aly', 'AL8G12240' => 'aly', 'AL8G18540' => 'aly', 'Aqoxy1G02409' => 'aox', 'Aqoxy2G03993' => 'aox', 'Aqoxy3G03357' => 'aox', 'Aqoxy4G00785' => 'aox', 'Aqoxy5G02598' => 'aox', 'Aqoxy6G00132' => 'aox', 'Aqoxy7G01776' => 'aox', 'Aqoxy7G02316' => 'aox', 'Aqoxy7G03973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.12AFKW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B8730' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27IQR1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3F75VG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3RE0GA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41TCQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.527VTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FIR39' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5W8UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DA38EV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ63HS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H1I32C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HC27T5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4M8AP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7N3CZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9UVDZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LS1NQA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT1D4B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SKC4TM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCFV76' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF9Q1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQWD9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1ZM88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WE07RT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YCK7VH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJE6Q6' => 'arhy', 'AT1G28240' => 'ath', 'AT1G34550' => 'ath', 'AT1G53040' => 'ath', 'AT2G02910' => 'ath', 'AT4G09630' => 'ath', 'AT4G38500' => 'ath', 'AT5G42660' => 'ath', 'AT5G46220' => 'ath', 'ATR0152G026' => 'atr', 'ATR0564G343' => 'atr', 'ATR0706G151' => 'atr', 'ATR0733G207' => 'atr', 'ATR0751G234' => 'atr', 'ATR0807G048' => 'atr', 'ATR1091G084' => 'atr', 'Atru.chr10.1229' => 'acertr', 'Atru.chr10.1230' => 'acertr', 'Atru.chr10.1874' => 'acertr', 'Atru.chr11.1808' => 'acertr', 'Atru.chr13.1795' => 'acertr', 'Atru.chr13.570' => 'acertr', 'Atru.chr2.2608' => 'acertr', 'Atru.chr2.2609' => 'acertr', 'Atru.chr5.3428' => 'acertr', 'Atru.chr8.1171' => 'acertr', 'AUR62004651' => 'cqu', 'AUR62008675' => 'cqu', 'AUR62010014' => 'cqu', 'AUR62013004' => 'cqu', 'AUR62014825' => 'cqu', 'AUR62015015' => 'cqu', 'AUR62015151' => 'cqu', 'AUR62017020' => 'cqu', 'AUR62019422' => 'cqu', 'AUR62023570' => 'cqu', 'AUR62025571' => 'cqu', 'AUR62029098' => 'cqu', 'AUR62033863' => 'cqu', 'AUR62034296' => 'cqu', 'AUR62040075' => 'cqu', 'BcaB02g07334' => 'bca', 'BcaB02g10575' => 'bca', 'BcaB03g12119' => 'bca', 'BcaB03g12120' => 'bca', 'BcaB03g13945' => 'bca', 'BcaB04g17123' => 'bca', 'BcaB04g17867' => 'bca', 'BcaB04g19839' => 'bca', 'BcaB07g30317' => 'bca', 'BcaB07g32432' => 'bca', 'BcaB07g33362' => 'bca', 'BcaB08g36611' => 'bca', 'BcaC01g00028' => 'bca', 'BcaC01g01356' => 'bca', 'BcaC01g02034' => 'bca', 'BcaC01g06051' => 'bca', 'BcaC03g16839' => 'bca', 'BcaC03g17176' => 'bca', 'BcaC05g26829' => 'bca', 'BcaC06g31490' => 'bca', 'BcaC06g35344' => 'bca', 'BcaC06g36570' => 'bca', 'BcaC07g37537' => 'bca', 'BcaC08g43491' => 'bca', 'BcaC08g43773' => 'bca', 'BcaNung00234' => 'bca', 'BcaNung01982' => 'bca', 'BcaNung03707' => 'bca', 'BcaNung06454' => 'bca', 'BolC2t10762H' => 'bol', 'BolC2t11191H' => 'bol', 'BolC3t14322H' => 'bol', 'BolC3t19747H' => 'bol', 'BolC3t21425H' => 'bol', 'BolC4t27800H' => 'bol', 'BolC5t31423H' => 'bol', 'BolC6t35951H' => 'bol', 'BolC6t36282H' => 'bol', 'BolC7t40678H' => 'bol', 'BolC7t40679H' => 'bol', 'BolC7t42222H' => 'bol', 'BolC7t43492H' => 'bol', 'BolC7t46785H' => 'bol', 'BolC8t47853H' => 'bol', 'BolC9t56805H' => 'bol', 'BraA02t08000Z' => 'bra', 'BraA02t08341Z' => 'bra', 'BraA03t10936Z' => 'bra', 'BraA03t15657Z' => 'bra', 'BraA04t18100Z' => 'bra', 'BraA05t20523Z' => 'bra', 'BraA06t23353Z' => 'bra', 'BraA06t27473Z' => 'bra', 'BraA06t27769Z' => 'bra', 'BraA07t28928Z' => 'bra', 'BraA08t32236Z' => 'bra', 'BraA08t32841Z' => 'bra', 'BraA08t34524Z' => 'bra', 'BraA09t38742Z' => 'bra', 'BraA09t39295Z' => 'bra', 'C02p47180' => 'bna', 'C02p50990' => 'bna', 'C03p19360' => 'bna', 'C03p74950' => 'bna', 'C03p91000' => 'bna', 'C04p63260' => 'bna', 'C05p27050' => 'bna', 'C06p08750' => 'bna', 'C06p11490' => 'bna', 'C07p02820' => 'bna', 'C07p17180' => 'bna', 'C07p29440' => 'bna', 'C07p63730' => 'bna', 'C09p39260' => 'bna', 'CAN.G1164.34' => 'can', 'CAN.G1164.39' => 'can', 'CAN.G1530.3' => 'can', 'CAN.G162.61' => 'can', 'CAN.G176.6' => 'can', 'CAN.G289.49' => 'can', 'CAN.G370.21' => 'can', 'CAN.G370.22' => 'can', 'CAN.G371.117' => 'can', 'CAN.G58.37' => 'can', 'CAN.G588.98' => 'can', 'CANSAT21G2266' => 'cansat', 'CANSAT25G2799' => 'cansat', 'CANSAT35G0862' => 'cansat', 'CANSAT35G1704' => 'cansat', 'CANSAT35G1760' => 'cansat', 'CANSAT56G3971' => 'cansat', 'CANSAT56G4116' => 'cansat', 'CANSAT80G1259' => 'cansat', 'CARHR027730' => 'chi', 'CARHR033880' => 'chi', 'CARHR043270' => 'chi', 'CARHR145330' => 'chi', 'CARHR145340' => 'chi', 'CARHR175570' => 'chi', 'CARHR181570' => 'chi', 'CARHR258470' => 'chi', 'CARHR260490' => 'chi', 'CARHR294220' => 'chi', 'Carub.0001s2668' => 'cru', 'Carub.0001s3257' => 'cru', 'Carub.0001s4220' => 'cru', 'Carub.0005s0179' => 'cru', 'Carub.0006s2807' => 'cru', 'Carub.0007s0039' => 'cru', 'Carub.0008s0169' => 'cru', 'Carub.0008s0636' => 'cru', 'Ca_00338_v3' => 'car', 'Ca_00542_v3' => 'car', 'Ca_01844_v3' => 'car', 'Ca_10611_v3' => 'car', 'Ca_13326_v3' => 'car', 'Ca_17944_v3' => 'car', 'Ca_18546_v3' => 'car', 'Ca_24219_v3' => 'car', 'Ca_29972_v3' => 'car', 'CBR_g3681' => 'cbr', 'CBR_g40021' => 'cbr', 'Cc01_g08140' => 'ccan', 'Cc02_g13410' => 'ccan', 'Cc02_g37480' => 'ccan', 'Cc05_g12030' => 'ccan', 'Cc09_g03370' => 'ccan', 'Cc09_g10300' => 'ccan', 'Cc10_g03530' => 'ccan', 'Cc10_g11380' => 'ccan', 'CDE01G0176' => 'cde', 'CDE02G0675' => 'cde', 'CDE02G0942' => 'cde', 'CDE02G1153' => 'cde', 'CDE02G4177' => 'cde', 'CDE04G2117' => 'cde', 'CDE04G2736' => 'cde', 'CDE08G1161' => 'cde', 'CDE09G1238' => 'cde', 'Cfa000467' => 'cfa', 'Cfa000947' => 'cfa', 'Cfa004969' => 'cfa', 'Cfa005284' => 'cfa', 'Cfa008993' => 'cfa', 'Cfa018187' => 'cfa', 'Cfa018454' => 'cfa', 'Cfa020585' => 'cfa', 'Ciclev10000424m.g' => 'ccl', 'Ciclev10003605m.g' => 'ccl', 'Ciclev10007828m.g' => 'ccl', 'Ciclev10014620m.g' => 'ccl', 'Ciclev10015169m.g' => 'ccl', 'Ciclev10018291m.g' => 'ccl', 'Ciclev10028256m.g' => 'ccl', 'Ciclev10033822m.g' => 'ccl', 'CiPaw.05G060300' => 'cil', 'CiPaw.05G085000' => 'cil', 'CiPaw.06G083700' => 'cil', 'CiPaw.06G120300' => 'cil', 'CiPaw.09G060500' => 'cil', 'CiPaw.09G123800' => 'cil', 'CiPaw.11G169700' => 'cil', 'CiPaw.12G118300' => 'cil', 'CiPaw.15G071000' => 'cil', 'CiPaw.15G081900' => 'cil', 'ClCG01G024610' => 'cla', 'ClCG03G006070' => 'cla', 'ClCG05G019250' => 'cla', 'ClCG09G009500' => 'cla', 'ClCG11G008200' => 'cla', 'ClCG11G018080' => 'cla', 'COL.COLO4_17373' => 'col', 'COL.COLO4_22994' => 'col', 'COL.COLO4_26389' => 'col', 'COL.COLO4_27170' => 'col', 'COL.COLO4_31074' => 'col', 'COL.COLO4_31465' => 'col', 'COL.COLO4_36438' => 'col', 'COL.COLO4_36439' => 'col', 'Cpa.g.c38781' => 'cpa', 'Cpa.g.sc128.12' => 'cpa', 'Cpa.g.sc166.7' => 'cpa', 'Cpa.g.sc166.8' => 'cpa', 'Cpa.g.sc20.111' => 'cpa', 'Cpa.g.sc27.31' => 'cpa', 'Cpa.g.sc64.36' => 'cpa', 'Cpa.g.sc64.37' => 'cpa', 'Cpa.g.sc66.49' => 'cpa', 'Cpa.g.sc80.64' => 'cpa', 'CsaV3_1G012320' => 'csa', 'CsaV3_2G008480' => 'csa', 'CsaV3_2G033450' => 'csa', 'CsaV3_3G044830' => 'csa', 'CsaV3_4G033710' => 'csa', 'CsaV3_6G051730' => 'csa', 'CsaV3_7G025350' => 'csa', 'CSS0001067' => 'camsi', 'CSS0005996' => 'camsi', 'CSS0006590' => 'camsi', 'CSS0009673' => 'camsi', 'CSS0010201' => 'camsi', 'CSS0010549' => 'camsi', 'CSS0011364' => 'camsi', 'CSS0014473' => 'camsi', 'CSS0014961' => 'camsi', 'CSS0020191' => 'camsi', 'CSS0021165' => 'camsi', 'CSS0022306' => 'camsi', 'CSS0030591' => 'camsi', 'CSS0030696' => 'camsi', 'CSS0032653' => 'camsi', 'CSS0037487' => 'camsi', 'CSS0041102' => 'camsi', 'CSS0041261' => 'camsi', 'CSS0046246' => 'camsi', 'CSS0049256' => 'camsi', 'DCAR_004075' => 'dca', 'DCAR_011538' => 'dca', 'DCAR_019553' => 'dca', 'DCAR_020952' => 'dca', 'DCAR_021739' => 'dca', 'DCAR_027407' => 'dca', 'DCAR_027913' => 'dca', 'DCAR_028066' => 'dca', 'Dinv05899' => 'din', 'Dinv07563' => 'din', 'Dinv08010' => 'din', 'Dinv14125' => 'din', 'Dinv20172' => 'din', 'Dinv30743' => 'din', 'Dinv31229' => 'din', 'Dinv34162' => 'din', 'Dinv36028' => 'din', 'Dinv39368' => 'din', 'Dinv40565' => 'din', 'Dinv41706' => 'din', 'Duzib052G0089' => 'dzi', 'Duzib116G0641' => 'dzi', 'Duzib132G0069' => 'dzi', 'Duzib132G1219' => 'dzi', 'Duzib147G0278' => 'dzi', 'Duzib160G0480' => 'dzi', 'Duzib170G0661' => 'dzi', 'Duzib177G0591' => 'dzi', 'Duzib187G1353' => 'dzi', 'Duzib192G0858' => 'dzi', 'Duzib192G0883' => 'dzi', 'Duzib213G0506' => 'dzi', 'Duzib235G0289' => 'dzi', 'Duzib251G0422' => 'dzi', 'ECA232G3898' => 'eca', 'ECA233G5950' => 'eca', 'ECA234G1699' => 'eca', 'ECA234G2421' => 'eca', 'ECA236G0426' => 'eca', 'ECA236G4331' => 'eca', 'ECA248G2573' => 'eca', 'EL10Ac1g00077' => 'bvu', 'EL10Ac1g01746' => 'bvu', 'EL10Ac2g03464' => 'bvu', 'EL10Ac4g08176' => 'bvu', 'EL10Ac7g17521' => 'bvu', 'EL10Ac8g20386' => 'bvu', 'EL10Ac9g21343' => 'bvu', 'EL10Ac9g22688' => 'bvu', 'Eucgr.B03434' => 'egr', 'Eucgr.D00618' => 'egr', 'Eucgr.E02395' => 'egr', 'Eucgr.F01129' => 'egr', 'Eucgr.F02622' => 'egr', 'Eucgr.F04207' => 'egr', 'FAN01G0570' => 'fan', 'FAN03G3351' => 'fan', 'FAN06G3702' => 'fan', 'FAN07G2149' => 'fan', 'FAN10G3758' => 'fan', 'FAN11G1170' => 'fan', 'FAN11G2050' => 'fan', 'FAN11G2724' => 'fan', 'FAN12G1700' => 'fan', 'FAN12G2028' => 'fan', 'FAN15G1160' => 'fan', 'FAN15G3063' => 'fan', 'FAN16G2540' => 'fan', 'FAN16G3077' => 'fan', 'FAN16G3624' => 'fan', 'FAN17G0221' => 'fan', 'FAN20G2492' => 'fan', 'FAN20G2905' => 'fan', 'FAN21G0548' => 'fan', 'FAN21G1300' => 'fan', 'FAN22G0077' => 'fan', 'FAN22G1315' => 'fan', 'FAN24G1280' => 'fan', 'FAN24G1445' => 'fan', 'FAN24G3527' => 'fan', 'FAN25G0464' => 'fan', 'FAN25G2885' => 'fan', 'FAN25G3270' => 'fan', 'FAN27G1101' => 'fan', 'FAN27G2846' => 'fan', 'FAN27G3524' => 'fan', 'FvH4_2g11770' => 'fve', 'FvH4_2g15630' => 'fve', 'FvH4_3g05570' => 'fve', 'FvH4_3g09110' => 'fve', 'FvH4_3g19940' => 'fve', 'FvH4_4g04821' => 'fve', 'FvH4_4g31480' => 'fve', 'FvH4_7g01740' => 'fve', 'Glyma.05G130400' => 'gma', 'Glyma.05G156400' => 'gma', 'Glyma.07G197000' => 'gma', 'Glyma.08G085151' => 'gma', 'Glyma.08G114500' => 'gma', 'Glyma.08G300400' => 'gma', 'Glyma.10G215800' => 'gma', 'Glyma.12G224400' => 'gma', 'Glyma.13G179300' => 'gma', 'Glyma.13G218151' => 'gma', 'Glyma.13G238800' => 'gma', 'Glyma.13G276900' => 'gma', 'Glyma.14G078200' => 'gma', 'Glyma.15G074500' => 'gma', 'Glyma.15G094100' => 'gma', 'Glyma.17G247200' => 'gma', 'Glyma.18G120100' => 'gma', 'Glyma.20G176000' => 'gma', 'Gohir.A01G063600' => 'ghi', 'Gohir.A01G170301' => 'ghi', 'Gohir.A02G060500' => 'ghi', 'Gohir.A05G133850' => 'ghi', 'Gohir.A05G161400' => 'ghi', 'Gohir.A06G012900' => 'ghi', 'Gohir.A06G035901' => 'ghi', 'Gohir.A06G127100' => 'ghi', 'Gohir.A06G210500' => 'ghi', 'Gohir.A08G008650' => 'ghi', 'Gohir.A09G072700' => 'ghi', 'Gohir.A09G088301' => 'ghi', 'Gohir.A10G040600' => 'ghi', 'Gohir.A12G036300' => 'ghi', 'Gohir.A12G143350' => 'ghi', 'Gohir.A12G165500' => 'ghi', 'Gohir.A13G145700' => 'ghi', 'Gohir.D01G050000' => 'ghi', 'Gohir.D01G051366' => 'ghi', 'Gohir.D01G161350' => 'ghi', 'Gohir.D02G065900' => 'ghi', 'Gohir.D05G164200' => 'ghi', 'Gohir.D05G355500' => 'ghi', 'Gohir.D06G010400' => 'ghi', 'Gohir.D06G111250' => 'ghi', 'Gohir.D06G132000' => 'ghi', 'Gohir.D06G210500' => 'ghi', 'Gohir.D07G165675' => 'ghi', 'Gohir.D08G062240' => 'ghi', 'Gohir.D08G086101' => 'ghi', 'Gohir.D08G138060' => 'ghi', 'Gohir.D09G072300' => 'ghi', 'Gohir.D10G041400' => 'ghi', 'Gohir.D11G191020' => 'ghi', 'Gohir.D11G212066' => 'ghi', 'Gohir.D12G036300' => 'ghi', 'Gohir.D12G168600' => 'ghi', 'Gohir.D13G150600' => 'ghi', 'Gorai.001G057300' => 'gra', 'Gorai.002G069900' => 'gra', 'Gorai.002G200000' => 'gra', 'Gorai.003G067600' => 'gra', 'Gorai.005G074800' => 'gra', 'Gorai.006G087300' => 'gra', 'Gorai.008G037500' => 'gra', 'Gorai.008G181400' => 'gra', 'Gorai.009G169400' => 'gra', 'Gorai.009G387900' => 'gra', 'Gorai.010G013300' => 'gra', 'Gorai.010G153800' => 'gra', 'Gorai.010G255800' => 'gra', 'Gorai.011G043700' => 'gra', 'Gorai.011G198900' => 'gra', 'Gorai.013G168400' => 'gra', 'GSVIVG01005212001' => 'vvi', 'GSVIVG01006163001' => 'vvi', 'GSVIVG01009625001' => 'vvi', 'GSVIVG01014338001' => 'vvi', 'GSVIVG01020005001' => 'vvi', 'GSVIVG01021450001' => 'vvi', 'GSVIVG01023975001' => 'vvi', 'GSVIVG01034490001' => 'vvi', 'HanXRQChr04g0112071' => 'han', 'HanXRQChr05g0131151' => 'han', 'HanXRQChr09g0262371' => 'han', 'HanXRQChr09g0268401' => 'han', 'HanXRQChr10g0279241' => 'han', 'HanXRQChr10g0297961' => 'han', 'HanXRQChr11g0326231' => 'han', 'HanXRQChr11g0328471' => 'han', 'HanXRQChr16g0507941' => 'han', 'HanXRQChr17g0560211' => 'han', 'Haze_02108' => 'cav', 'Haze_02428' => 'cav', 'Haze_05593' => 'cav', 'Haze_06448' => 'cav', 'Haze_09427' => 'cav', 'Haze_12022' => 'cav', 'Haze_17612' => 'cav', 'Haze_17928' => 'cav', 'Hma1.2p1_0032F.1_g019250' => 'hma', 'Hma1.2p1_0163F.1_g072690' => 'hma', 'Hma1.2p1_0265F.1_g106710' => 'hma', 'Hma1.2p1_0286F.1_g113970' => 'hma', 'Hma1.2p1_0363F.1_g136640' => 'hma', 'Hma1.2p1_0584F.1_g183470' => 'hma', 'Hma1.2p1_0885F.1_g232570' => 'hma', 'HPP92_006022' => 'vpl', 'HPP92_007320' => 'vpl', 'HPP92_011521' => 'vpl', 'HPP92_019387' => 'vpl', 'HPP92_024038' => 'vpl', 'Hund05891' => 'sun', 'Hund06450' => 'sun', 'Hund12053' => 'sun', 'Hund16800' => 'sun', 'Hund21222' => 'sun', 'Hund22896' => 'sun', 'Hund23746' => 'sun', 'Hund27083' => 'sun', 'Lalb_Chr02g0141831' => 'lal', 'Lalb_Chr02g0141841' => 'lal', 'Lalb_Chr05g0220411' => 'lal', 'Lalb_Chr06g0162081' => 'lal', 'Lalb_Chr09g0327651' => 'lal', 'Lalb_Chr13g0295051' => 'lal', 'Lalb_Chr15g0086801' => 'lal', 'Lalb_Chr16g0383781' => 'lal', 'Lalb_Chr16g0383791' => 'lal', 'Lalb_Chr18g0055441' => 'lal', 'Lalb_Chr18g0059611' => 'lal', 'Lalb_Chr20g0109661' => 'lal', 'Lalb_Chr20g0109831' => 'lal', 'Lalb_Chr20g0121871' => 'lal', 'Lalb_Chr22g0355361' => 'lal', 'Lalb_Chr25g0286371' => 'lal', 'Lj1A1187G43' => 'lonja', 'Lj1A1205T50' => 'lonja', 'Lj1A800G33' => 'lonja', 'Lj1C1187T7' => 'lonja', 'Lj1C843T11' => 'lonja', 'Lj1g0010940' => 'lja', 'Lj2A288T69' => 'lonja', 'Lj3g0024276' => 'lja', 'Lj4A47T76' => 'lonja', 'Lj4g0005805' => 'lja', 'Lj4g0006097' => 'lja', 'Lj4g0008528' => 'lja', 'Lj4g0024907' => 'lja', 'Lj5g0012472' => 'lja', 'Lj5g0018648' => 'lja', 'Lj6C789G1' => 'lonja', 'Lj6g0004000' => 'lja', 'Lj7A292G67' => 'lonja', 'Lj7A292T64' => 'lonja', 'Lj9A400T58' => 'lonja', 'Lsat_1_v5_gn_1_126181' => 'lsa', 'Lsat_1_v5_gn_4_123041' => 'lsa', 'Lsat_1_v5_gn_4_133620' => 'lsa', 'Lsat_1_v5_gn_4_53221' => 'lsa', 'Lsat_1_v5_gn_4_71961' => 'lsa', 'Lsat_1_v5_gn_7_105241' => 'lsa', 'Lsat_1_v5_gn_7_21361' => 'lsa', 'Lsat_1_v5_gn_7_28860' => 'lsa', 'Lsat_1_v5_gn_7_31260' => 'lsa', 'Lsat_1_v5_gn_8_52801' => 'lsa', 'Manes.02G191400' => 'mes', 'Manes.03G110100' => 'mes', 'Manes.04G071100' => 'mes', 'Manes.05G100500' => 'mes', 'Manes.05G164700' => 'mes', 'Manes.15G087000' => 'mes', 'Manes.15G121500' => 'mes', 'Manes.16G028300' => 'mes', 'Manes.17G046100' => 'mes', 'Manes.17G069800' => 'mes', 'Manes.18G100500' => 'mes', 'Mapoly0002s0109' => 'mpo', 'Mapoly0024s0007' => 'mpo', 'Mapoly0089s0032' => 'mpo', 'MBI04_g42241_MAGBIO' => 'mbi', 'MBI05_g11988_MAGBIO' => 'mbi', 'MBI05_g35452_MAGBIO' => 'mbi', 'MBI07_g30179_MAGBIO' => 'mbi', 'MBI07_g35859_MAGBIO' => 'mbi', 'MBI07_g35860_MAGBIO' => 'mbi', 'MBI07_g37166_MAGBIO' => 'mbi', 'MBI08_g18172_MAGBIO' => 'mbi', 'MBI09_g08441_MAGBIO' => 'mbi', 'MBI13_g01676_MAGBIO' => 'mbi', 'MBI14_g42955_MAGBIO' => 'mbi', 'MBI16_g13161_MAGBIO' => 'mbi', 'MBI17_g27204_MAGBIO' => 'mbi', 'MBI19_g21595_MAGBIO' => 'mbi', 'MD00G1148400' => 'mdo', 'MD02G1301200' => 'mdo', 'MD03G1227800' => 'mdo', 'MD05G1041100' => 'mdo', 'MD05G1124800' => 'mdo', 'MD05G1284000' => 'mdo', 'MD05G1338800' => 'mdo', 'MD05G1338900' => 'mdo', 'MD07G1022800' => 'mdo', 'MD10G1047500' => 'mdo', 'MD10G1127500' => 'mdo', 'MD10G1262300' => 'mdo', 'MD10G1293800' => 'mdo', 'MD16G1074300' => 'mdo', 'Medtr1g021670' => 'mtr', 'Medtr1g096320' => 'mtr', 'Medtr2g013690' => 'mtr', 'Medtr2g019450' => 'mtr', 'Medtr2g085170' => 'mtr', 'Medtr4g088785' => 'mtr', 'Medtr8g055930' => 'mtr', 'Medtr8g085850' => 'mtr', 'MELO3C002605.2' => 'cme', 'MELO3C003891.2' => 'cme', 'MELO3C004012.2' => 'cme', 'MELO3C007134.2' => 'cme', 'MELO3C008118.2' => 'cme', 'MELO3C016700.2' => 'cme', 'MELO3C024127.2' => 'cme', 'MELO3C033361.2' => 'cme', 'MELO3C033362.2' => 'cme', 'Migut.C00430' => 'egut', 'Migut.C01246' => 'egut', 'Migut.E00101' => 'egut', 'Migut.H01486' => 'egut', 'Migut.H01939' => 'egut', 'Migut.K00360' => 'egut', 'Migut.M00910' => 'egut', 'Migut.M01139' => 'egut', 'Migut.N02677' => 'egut', 'MSTRG.13252' => 'ama', 'MSTRG.14701' => 'ama', 'MSTRG.1521' => 'ama', 'MSTRG.15884' => 'ama', 'MSTRG.16242' => 'ama', 'MSTRG.22285' => 'ama', 'MSTRG.22444' => 'ama', 'MSTRG.2349' => 'ama', 'MSTRG.26308' => 'ama', 'MSTRG.28296' => 'ama', 'MSTRG.9895' => 'ama', 'Nitab4.5_0000110g0060' => 'nta', 'Nitab4.5_0000420g0130' => 'nta', 'Nitab4.5_0000422g0030' => 'nta', 'Nitab4.5_0000560g0180' => 'nta', 'Nitab4.5_0000703g0100' => 'nta', 'Nitab4.5_0000786g0200' => 'nta', 'Nitab4.5_0001336g0020' => 'nta', 'Nitab4.5_0001796g0030' => 'nta', 'Nitab4.5_0003348g0060' => 'nta', 'Nitab4.5_0003698g0040' => 'nta', 'Nitab4.5_0003942g0090' => 'nta', 'Nitab4.5_0004775g0070' => 'nta', 'Nitab4.5_0004864g0030' => 'nta', 'Nitab4.5_0005615g0020' => 'nta', 'Nitab4.5_0009288g0030' => 'nta', 'Nitab4.5_0009341g0010' => 'nta', 'Nitab4.5_0009535g0010' => 'nta', 'Nn1g03995' => 'nnu', 'Nn1g04100' => 'nnu', 'Nn1g06530' => 'nnu', 'Nn3g16404' => 'nnu', 'Nn3g17212' => 'nnu', 'Nn3g20776' => 'nnu', 'Nn3g21923' => 'nnu', 'Nn5g27737' => 'nnu', 'Nn5g29461' => 'nnu', 'Nn7g38355' => 'nnu', 'Nn8g39873' => 'nnu', 'Oeu000548.2' => 'oeu', 'Oeu004672.1' => 'oeu', 'Oeu015605.2' => 'oeu', 'Oeu016092.1' => 'oeu', 'Oeu017879.3' => 'oeu', 'Oeu024910.1' => 'oeu', 'Oeu028965.1' => 'oeu', 'Oeu031269.1' => 'oeu', 'Oeu031270.1' => 'oeu', 'Oeu032535.1' => 'oeu', 'Oeu034151.1' => 'oeu', 'Oeu034152.1' => 'oeu', 'Oeu034588.2' => 'oeu', 'Oeu050846.1' => 'oeu', 'Oeu050849.2' => 'oeu', 'Oeu051063.2' => 'oeu', 'Oeu052368.1' => 'oeu', 'Oeu052370.1' => 'oeu', 'Os01g0210400' => 'osa', 'Os01g0304300' => 'osa', 'Os01g0749100' => 'osa', 'Os02g0745800' => 'osa', 'Os03g0769050' => 'osa', 'Os05g0531500' => 'osa', 'Os06g0724300' => 'osa', 'Os11g0198100' => 'osa', 'Peaxi162Scf00069g01425' => 'pax', 'Peaxi162Scf00280g00811' => 'pax', 'Peaxi162Scf00310g00615' => 'pax', 'Peaxi162Scf00362g00542' => 'pax', 'Peaxi162Scf00461g00310' => 'pax', 'Peaxi162Scf00530g00118' => 'pax', 'Peaxi162Scf00541g00057' => 'pax', 'Peaxi162Scf00661g00017' => 'pax', 'Peaxi162Scf00926g00027' => 'pax', 'Peaxi162Scf01064g00263' => 'pax', 'Peaxi162Scf01211g00135' => 'pax', 'PGR004G2336' => 'pgr', 'PGR042G0327' => 'pgr', 'PGR042G1957' => 'pgr', 'PGR042G2003' => 'pgr', 'PGR042G3929' => 'pgr', 'PGR083G1137' => 'pgr', 'PGR083G1364' => 'pgr', 'PGSC0003DMG400003381' => 'stu', 'PGSC0003DMG400003417' => 'stu', 'PGSC0003DMG400008981' => 'stu', 'PGSC0003DMG400012417' => 'stu', 'PGSC0003DMG400012823' => 'stu', 'PGSC0003DMG400016885' => 'stu', 'PGSC0003DMG400022812' => 'stu', 'PGSC0003DMG400029726' => 'stu', 'PGSC0003DMG401009243' => 'stu', 'PGSC0003DMG401031505' => 'stu', 'PGSC0003DMG402031505' => 'stu', 'Phvul.001G017600' => 'pvu', 'Phvul.002G193500' => 'pvu', 'Phvul.002G228900' => 'pvu', 'Phvul.002G236800' => 'pvu', 'Phvul.003G049500' => 'pvu', 'Phvul.005G072000' => 'pvu', 'Phvul.006G164800' => 'pvu', 'Phvul.006G185100' => 'pvu', 'Phvul.007G090000' => 'pvu', 'Potri.001G399800' => 'ptr', 'Potri.002G149900' => 'ptr', 'Potri.004G044100' => 'ptr', 'Potri.004G177600' => 'ptr', 'Potri.009G138000' => 'ptr', 'Potri.010G094000' => 'ptr', 'Potri.011G053000' => 'ptr', 'Potri.011G119300' => 'ptr', 'Potri.013G113700' => 'ptr', 'Potri.018G107800' => 'ptr', 'Potri.019G084100' => 'ptr', 'Pp3c14_23720' => 'ppa', 'Pp3c16_6340' => 'ppa', 'Pp3c23_13420' => 'ppa', 'Pp3c24_2740' => 'ppa', 'Pp3c25_860' => 'ppa', 'Pp3c8_21750' => 'ppa', 'Prupe.1G273000' => 'ppe', 'Prupe.1G273700' => 'ppe', 'Prupe.1G274100' => 'ppe', 'Prupe.2G023300' => 'ppe', 'Prupe.4G048000' => 'ppe', 'Prupe.4G080400' => 'ppe', 'Prupe.4G181200' => 'ppe', 'Prupe.8G056900' => 'ppe', 'Prupe.8G168700' => 'ppe', 'Psat1g189080' => 'psa', 'Psat1g204760' => 'psa', 'Psat4g175560' => 'psa', 'Psat4g177720' => 'psa', 'Psat5g244240' => 'psa', 'Psat6g010720' => 'psa', 'Psat6g187200' => 'psa', 'Psat7g072040' => 'psa', 'PSO017G3501' => 'pso', 'PSO063G2148' => 'pso', 'PSO063G5608' => 'pso', 'PSO210G6392' => 'pso', 'PSO541G2319' => 'pso', 'PSO541G2836' => 'pso', 'PSO541G4012' => 'pso', 'PSO541G6253' => 'pso', 'PSO675G0580' => 'pso', 'PSO675G0856' => 'pso', 'PSO675G5635' => 'pso', 'PSO675G9157' => 'pso', 'PSO832G1660' => 'pso', 'PSO832G1969' => 'pso', 'QL02p007186' => 'qlo', 'QL02p033904' => 'qlo', 'QL03p064391' => 'qlo', 'QL05p040593' => 'qlo', 'QL05p058242' => 'qlo', 'QL08p021825' => 'qlo', 'QL11p004981' => 'qlo', 'RcHm_v2.0_Chr1g0318301' => 'rch', 'RcHm_v2.0_Chr4g0418501' => 'rch', 'RcHm_v2.0_Chr4g0439971' => 'rch', 'RcHm_v2.0_Chr5g0008541' => 'rch', 'RcHm_v2.0_Chr5g0014101' => 'rch', 'RcHm_v2.0_Chr5g0014131' => 'rch', 'RcHm_v2.0_Chr5g0033621' => 'rch', 'RcHm_v2.0_Chr6g0272041' => 'rch', 'RcHm_v2.0_Chr6g0278831' => 'rch', 'Rhsim02G0130400' => 'rsi', 'Rhsim02G0171100' => 'rsi', 'Rhsim05G0053000' => 'rsi', 'Rhsim05G0053100' => 'rsi', 'Rhsim06G0096500' => 'rsi', 'Rhsim06G0096600' => 'rsi', 'Rhsim06G0199100' => 'rsi', 'Rhsim12G0062300' => 'rsi', 'Rhsim12G0062800' => 'rsi', 'Sabra02G0118600' => 'sbr', 'Sabra04G0027300' => 'sbr', 'Sabra04G0119500' => 'sbr', 'Sabra08G0112500' => 'sbr', 'Sabra11G0036800' => 'sbr', 'Sabra11G0103800' => 'sbr', 'Sabra13G0096300' => 'sbr', 'Sabra16G0262300' => 'sbr', 'Sabra18G0091700' => 'sbr', 'Sabra19G0095400' => 'sbr', 'SalBow6G3080' => 'sbo', 'SalBow7G1157' => 'sbo', 'SalBow7G2123' => 'sbo', 'SalBow7G2285' => 'sbo', 'SalBow7G3537' => 'sbo', 'SalBow8G2947' => 'sbo', 'SalBow8G4463' => 'sbo', 'SalBow8G5466' => 'sbo', 'Sc01g0001750' => 'sci', 'Sc02g0006640' => 'sci', 'Sc02g0006670' => 'sci', 'Sc04g0008220' => 'sci', 'Sc05g0006190' => 'sci', 'Sc08g0002760' => 'sci', 'Sc17g0006170' => 'sci', 'Sc22g0002050' => 'sci', 'Sc23g0001190' => 'sci', 'Sc24g0000980' => 'sci', 'Sed0006245' => 'sed', 'Sed0007543' => 'sed', 'Sed0009411' => 'sed', 'Sed0010765' => 'sed', 'Sed0012944' => 'sed', 'Sed0014682' => 'sed', 'Sed0016174' => 'sed', 'Sed0016796' => 'sed', 'Sed0020317' => 'sed', 'Sed0021467' => 'sed', 'SEGI_01316' => 'sgi', 'SEGI_03374' => 'sgi', 'SEGI_16265' => 'sgi', 'SEGI_18569' => 'sgi', 'SEGI_20351' => 'sgi', 'SEGI_26395' => 'sgi', 'SEGI_29469' => 'sgi', 'SEGI_34771' => 'sgi', 'SEGI_36769' => 'sgi', 'SEGI_37139' => 'sgi', 'SGA_v2.0_scaffold100G29687' => 'sas', 'SGA_v2.0_scaffold118G32472' => 'sas', 'SGA_v2.0_scaffold14G07051' => 'sas', 'SGA_v2.0_scaffold183G39845' => 'sas', 'SGA_v2.0_scaffold1G00174' => 'sas', 'SGA_v2.0_scaffold22G09714' => 'sas', 'SGA_v2.0_scaffold333G48992' => 'sas', 'SGA_v2.0_scaffold46G17491' => 'sas', 'SGA_v2.0_scaffold49G18294' => 'sas', 'SGA_v2.0_scaffold63G21658' => 'sas', 'SHI01741' => 'shi', 'SHI05771' => 'shi', 'SHI18077' => 'shi', 'SHI20525' => 'shi', 'SHI20527' => 'shi', 'SHI20528' => 'shi', 'SMO172G0185' => 'smo', 'SMO198G0020' => 'smo', 'SMO351G0006' => 'smo', 'SMO356G0118' => 'smo', 'SMO358G0296' => 'smo', 'SMO367G0079' => 'smo', 'SMO367G1277' => 'smo', 'Solyc01g014220.3' => 'sly', 'Solyc01g111770.2' => 'sly', 'Solyc02g078180.3' => 'sly', 'Solyc03g006430.3' => 'sly', 'Solyc03g006456.1' => 'sly', 'Solyc03g079860.2' => 'sly', 'Solyc04g079770.3' => 'sly', 'Solyc05g007430.4' => 'sly', 'Solyc07g063150.3' => 'sly', 'Solyc08g016620.3' => 'sly', 'Solyc09g057590.3' => 'sly', 'Solyc09g057600.1' => 'sly', 'Solyc10g009050.3' => 'sly', 'Solyc11g017420.2' => 'sly', 'Sopen01g053810' => 'spe', 'Sopen02g023040' => 'spe', 'Sopen03g002440' => 'spe', 'Sopen04g033350' => 'spe', 'Sopen05g003310' => 'spe', 'Sopen07g004050' => 'spe', 'Sopen07g031340' => 'spe', 'Sopen08g006990' => 'spe', 'Sopen10g004830' => 'spe', 'Sopen11g009370' => 'spe', 'Sp1g24450' => 'spa', 'Sp1g29670' => 'spa', 'Sp1g39600' => 'spa', 'Sp2g11080' => 'spa', 'Sp2g13970' => 'spa', 'Sp4g16130' => 'spa', 'Sp6g13080' => 'spa', 'Sp7g37270' => 'spa', 'TAR371G0065' => 'tar', 'TAR376G0340' => 'tar', 'TAR376G0435' => 'tar', 'TAR381G0002' => 'tar', 'TAR381G1236' => 'tar', 'TAR624G0055' => 'tar', 'TAR624G0324' => 'tar', 'TAR624G0696' => 'tar', 'TAR624G0906' => 'tar', 'TAR625G0107' => 'tar', 'TAR626G0015' => 'tar', 'TAR626G1356' => 'tar', 'TAR627G0888' => 'tar', 'TAR628G0399' => 'tar', 'TAR628G1327' => 'tar', 'TAR629G2831' => 'tar', 'TAR629G2874' => 'tar', 'TAR633G1432' => 'tar', 'TAR633G2771' => 'tar', 'THA.LOC104803394' => 'tha', 'THA.LOC104805153' => 'tha', 'THA.LOC104806784' => 'tha', 'THA.LOC104810473' => 'tha', 'THA.LOC104813100' => 'tha', 'THA.LOC104814215' => 'tha', 'THA.LOC104815554' => 'tha', 'THA.LOC104820544' => 'tha', 'THA.LOC104824754' => 'tha', 'THA.LOC104827717' => 'tha', 'Thecc.02G031400' => 'tca', 'Thecc.02G055900' => 'tca', 'Thecc.02G350800' => 'tca', 'Thecc.06G150900' => 'tca', 'Thecc.06G186600' => 'tca', 'Thecc.07G089600' => 'tca', 'Thecc.08G020400' => 'tca', 'Thecc.08G182100' => 'tca', 'Thhalv10000873m.g' => 'esa', 'Thhalv10004185m.g' => 'esa', 'Thhalv10006981m.g' => 'esa', 'Thhalv10007204m.g' => 'esa', 'Thhalv10011374m.g' => 'esa', 'Thhalv10013482m.g' => 'esa', 'Thhalv10017801m.g' => 'esa', 'Thhalv10024983m.g' => 'esa', 'TPR.G12072' => 'tpr', 'TPR.G15769' => 'tpr', 'TPR.G16504' => 'tpr', 'TPR.G16506' => 'tpr', 'TPR.G24345' => 'tpr', 'TPR.G26666' => 'tpr', 'TPR.G27320' => 'tpr', 'TPR.G31819' => 'tpr', 'TPR.G38879' => 'tpr', 'TPR.G39015' => 'tpr', 'TPR.G8819' => 'tpr', 'TWI09G0924' => 'twi', 'TWI12G0811' => 'twi', 'TWI12G1294' => 'twi', 'TWI31G0150' => 'twi', 'TWI36G1262' => 'twi', 'TWI38G1287' => 'twi', 'TWI38G1633' => 'twi', 'TWI38G1982' => 'twi', 'TWI39G0116' => 'twi', 'TWI60G1011' => 'twi', 'TWI63G0171' => 'twi', 'TWI73G0839' => 'twi', 'TWI79G1511' => 'twi', 'unitig_0.g915' => 'ugi', 'unitig_0.g916' => 'ugi', 'unitig_21.g20219' => 'ugi', 'unitig_21.g20416' => 'ugi', 'unitig_578.g16132' => 'ugi', 'unitig_578.g16718' => 'ugi', 'unitig_62.g23481' => 'ugi', 'unitig_744.g24535' => 'ugi', 'unitig_749.g13525' => 'ugi', 'vmacro01248' => 'vma', 'vmacro02290' => 'vma', 'vmacro10946' => 'vma', 'vmacro11865' => 'vma', 'vmacro12493' => 'vma', 'vmacro17322' => 'vma', 'vmacro21599' => 'vma', 'vmacro23041' => 'vma', 'VMungo0251G0004' => 'vmu', 'VMungo0251G2639' => 'vmu', 'VMungo0251G2967' => 'vmu', 'VMungo0540G0864' => 'vmu', 'VMungo0540G1569' => 'vmu', 'VMungo0647G0317' => 'vmu', 'VMungo0720G1373' => 'vmu', 'VMungo0720G1508' => 'vmu', 'VMungo1080G0485' => 'vmu', 'VMungo1215G3177' => 'vmu', 'Zm00001eb112600' => 'zma', 'Zm00001eb120220' => 'zma', 'Zm00001eb153240' => 'zma', 'Zm00001eb168880' => 'zma', 'Zm00001eb213920' => 'zma', 'Zm00001eb228280' => 'zma', 'Zm00001eb254580' => 'zma', 'Zm00001eb272180' => 'zma', 'Zm00001eb293190' => 'zma', 'Zm00001eb322930' => 'zma', 'Zm00001eb353360' => 'zma', 'Zm00001eb353390' => 'zma', 'Zm00001eb353430' => 'zma', 'Zm00001eb353440' => 'zma', 'Zm00001eb353780' => 'zma' ), 'gf_id' => 'HOM05D000499', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000499' ), 'data_identifier' => 'HOM05D000499', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000499', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1066', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p29780' => 'bna', 'A02p33180' => 'bna', 'A03p16470' => 'bna', 'A03p66010' => 'bna', 'A04p25970' => 'bna', 'A06p01270' => 'bna', 'A06p46080' => 'bna', 'A07p11400' => 'bna', 'A08p01840' => 'bna', 'A08p08230' => 'bna', 'A08p25740' => 'bna', 'A09p32070' => 'bna', 'A09p37830' => 'bna', 'A09p42840' => 'bna', 'A09p42850' => 'bna', 'Aa31LG10G2060' => 'aar', 'Aa31LG2G7410' => 'aar', 'Aa31LG6G10200' => 'aar', 'Aa31LG6G16680' => 'aar', 'Aa31LG6G8470' => 'aar', 'Aa31LG9G12730' => 'aar', 'Aa31LG9G13680' => 'aar', 'Aa31LG9G14920' => 'aar', 'Aa31LG9G6650' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4977' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5467' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3254' => 'aag', 'Actinidia02578' => 'ach', 'Actinidia07693' => 'ach', 'Actinidia08413' => 'ach', 'Actinidia08414' => 'ach', 'Actinidia15289' => 'ach', 'Actinidia19871' => 'ach', 'Actinidia21475' => 'ach', 'Actinidia22576' => 'ach', 'Actinidia28327' => 'ach', 'Actinidia32491' => 'ach', 'Actinidia39463' => 'ach', 'Actinidia39571' => 'ach', 'Ah.01g013750' => 'amhyb', 'Ah.01g023210' => 'amhyb', 'Ah.04g164850' => 'amhyb', 'Ah.05g178060' => 'amhyb', 'Ah.07g204270' => 'amhyb', 'Ah.07g208480' => 'amhyb', 'Ah.09g237410' => 'amhyb', 'Ah.14g089460' => 'amhyb', 'AL1G41790' => 'aly', 'AL1G49050' => 'aly', 'AL1G53810' => 'aly', 'AL1G61400' => 'aly', 'AL4G18580' => 'aly', 'AL5G12510' => 'aly', 'AL5G12540' => 'aly', 'AL6G43230' => 'aly', 'AL7G10370' => 'aly', 'AL7G19250' => 'aly', 'AL8G12240' => 'aly', 'AL8G18540' => 'aly', 'Aqoxy1G02409' => 'aox', 'Aqoxy2G03993' => 'aox', 'Aqoxy3G03357' => 'aox', 'Aqoxy4G00785' => 'aox', 'Aqoxy5G02598' => 'aox', 'Aqoxy6G00132' => 'aox', 'Aqoxy7G01776' => 'aox', 'Aqoxy7G02316' => 'aox', 'Aqoxy7G03973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.12AFKW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B8730' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27IQR1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3F75VG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3RE0GA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41TCQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.527VTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FIR39' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5W8UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DA38EV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ63HS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H1I32C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HC27T5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4M8AP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7N3CZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9UVDZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LS1NQA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT1D4B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SKC4TM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCFV76' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF9Q1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQWD9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1ZM88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WE07RT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YCK7VH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJE6Q6' => 'arhy', 'AT1G28240' => 'ath', 'AT1G34550' => 'ath', 'AT1G53040' => 'ath', 'AT2G02910' => 'ath', 'AT4G09630' => 'ath', 'AT4G38500' => 'ath', 'AT5G42660' => 'ath', 'AT5G46220' => 'ath', 'ATR0152G026' => 'atr', 'ATR0564G343' => 'atr', 'ATR0706G151' => 'atr', 'ATR0733G207' => 'atr', 'ATR0751G234' => 'atr', 'ATR0807G048' => 'atr', 'ATR1091G084' => 'atr', 'Atru.chr10.1229' => 'acertr', 'Atru.chr10.1230' => 'acertr', 'Atru.chr10.1874' => 'acertr', 'Atru.chr11.1808' => 'acertr', 'Atru.chr13.1795' => 'acertr', 'Atru.chr13.570' => 'acertr', 'Atru.chr2.2608' => 'acertr', 'Atru.chr2.2609' => 'acertr', 'Atru.chr5.3428' => 'acertr', 'Atru.chr8.1171' => 'acertr', 'AUR62004651' => 'cqu', 'AUR62008675' => 'cqu', 'AUR62010014' => 'cqu', 'AUR62013004' => 'cqu', 'AUR62014825' => 'cqu', 'AUR62015015' => 'cqu', 'AUR62015151' => 'cqu', 'AUR62017020' => 'cqu', 'AUR62019422' => 'cqu', 'AUR62023570' => 'cqu', 'AUR62025571' => 'cqu', 'AUR62029098' => 'cqu', 'AUR62033863' => 'cqu', 'AUR62034296' => 'cqu', 'AUR62040075' => 'cqu', 'BcaB02g07334' => 'bca', 'BcaB02g10575' => 'bca', 'BcaB03g12119' => 'bca', 'BcaB03g12120' => 'bca', 'BcaB03g13945' => 'bca', 'BcaB04g17123' => 'bca', 'BcaB04g17867' => 'bca', 'BcaB04g19839' => 'bca', 'BcaB07g30317' => 'bca', 'BcaB07g32432' => 'bca', 'BcaB07g33362' => 'bca', 'BcaB08g36611' => 'bca', 'BcaC01g00028' => 'bca', 'BcaC01g01356' => 'bca', 'BcaC01g02034' => 'bca', 'BcaC01g06051' => 'bca', 'BcaC03g16839' => 'bca', 'BcaC03g17176' => 'bca', 'BcaC05g26829' => 'bca', 'BcaC06g31490' => 'bca', 'BcaC06g35344' => 'bca', 'BcaC06g36570' => 'bca', 'BcaC07g37537' => 'bca', 'BcaC08g43491' => 'bca', 'BcaC08g43773' => 'bca', 'BcaNung00234' => 'bca', 'BcaNung01982' => 'bca', 'BcaNung03707' => 'bca', 'BcaNung06454' => 'bca', 'BolC2t10762H' => 'bol', 'BolC2t11191H' => 'bol', 'BolC3t14322H' => 'bol', 'BolC3t19747H' => 'bol', 'BolC3t21425H' => 'bol', 'BolC4t27800H' => 'bol', 'BolC5t31423H' => 'bol', 'BolC6t35951H' => 'bol', 'BolC6t36282H' => 'bol', 'BolC7t40678H' => 'bol', 'BolC7t40679H' => 'bol', 'BolC7t42222H' => 'bol', 'BolC7t43492H' => 'bol', 'BolC7t46785H' => 'bol', 'BolC8t47853H' => 'bol', 'BolC9t56805H' => 'bol', 'BraA02t08000Z' => 'bra', 'BraA02t08341Z' => 'bra', 'BraA03t10936Z' => 'bra', 'BraA03t15657Z' => 'bra', 'BraA04t18100Z' => 'bra', 'BraA05t20523Z' => 'bra', 'BraA06t23353Z' => 'bra', 'BraA06t27473Z' => 'bra', 'BraA06t27769Z' => 'bra', 'BraA07t28928Z' => 'bra', 'BraA08t32236Z' => 'bra', 'BraA08t32841Z' => 'bra', 'BraA08t34524Z' => 'bra', 'BraA09t38742Z' => 'bra', 'BraA09t39295Z' => 'bra', 'C02p47180' => 'bna', 'C02p50990' => 'bna', 'C03p19360' => 'bna', 'C03p74950' => 'bna', 'C03p91000' => 'bna', 'C04p63260' => 'bna', 'C05p27050' => 'bna', 'C06p08750' => 'bna', 'C06p11490' => 'bna', 'C07p02820' => 'bna', 'C07p17180' => 'bna', 'C07p29440' => 'bna', 'C07p63730' => 'bna', 'C09p39260' => 'bna', 'CAN.G1164.34' => 'can', 'CAN.G1164.39' => 'can', 'CAN.G1530.3' => 'can', 'CAN.G162.61' => 'can', 'CAN.G176.6' => 'can', 'CAN.G289.49' => 'can', 'CAN.G370.21' => 'can', 'CAN.G370.22' => 'can', 'CAN.G371.117' => 'can', 'CAN.G58.37' => 'can', 'CAN.G588.98' => 'can', 'CANSAT21G2266' => 'cansat', 'CANSAT25G2799' => 'cansat', 'CANSAT35G0862' => 'cansat', 'CANSAT35G1704' => 'cansat', 'CANSAT35G1760' => 'cansat', 'CANSAT56G3971' => 'cansat', 'CANSAT56G4116' => 'cansat', 'CANSAT80G1259' => 'cansat', 'CARHR027730' => 'chi', 'CARHR033880' => 'chi', 'CARHR043270' => 'chi', 'CARHR145330' => 'chi', 'CARHR145340' => 'chi', 'CARHR175570' => 'chi', 'CARHR181570' => 'chi', 'CARHR258470' => 'chi', 'CARHR260490' => 'chi', 'CARHR294220' => 'chi', 'Carub.0001s2668' => 'cru', 'Carub.0001s3257' => 'cru', 'Carub.0001s4220' => 'cru', 'Carub.0005s0179' => 'cru', 'Carub.0006s2807' => 'cru', 'Carub.0007s0039' => 'cru', 'Carub.0008s0169' => 'cru', 'Carub.0008s0636' => 'cru', 'Ca_00338_v3' => 'car', 'Ca_00542_v3' => 'car', 'Ca_01844_v3' => 'car', 'Ca_10611_v3' => 'car', 'Ca_13326_v3' => 'car', 'Ca_17944_v3' => 'car', 'Ca_18546_v3' => 'car', 'Ca_24219_v3' => 'car', 'Ca_29972_v3' => 'car', 'CBR_g3681' => 'cbr', 'CBR_g40021' => 'cbr', 'Cc01_g08140' => 'ccan', 'Cc02_g13410' => 'ccan', 'Cc02_g37480' => 'ccan', 'Cc05_g12030' => 'ccan', 'Cc09_g03370' => 'ccan', 'Cc09_g10300' => 'ccan', 'Cc10_g03530' => 'ccan', 'Cc10_g11380' => 'ccan', 'CDE01G0176' => 'cde', 'CDE02G0675' => 'cde', 'CDE02G0942' => 'cde', 'CDE02G1153' => 'cde', 'CDE02G4177' => 'cde', 'CDE04G2117' => 'cde', 'CDE04G2736' => 'cde', 'CDE08G1161' => 'cde', 'CDE09G1238' => 'cde', 'Cfa000467' => 'cfa', 'Cfa000947' => 'cfa', 'Cfa004969' => 'cfa', 'Cfa005284' => 'cfa', 'Cfa008993' => 'cfa', 'Cfa018187' => 'cfa', 'Cfa018454' => 'cfa', 'Cfa020585' => 'cfa', 'Ciclev10000424m.g' => 'ccl', 'Ciclev10003605m.g' => 'ccl', 'Ciclev10007828m.g' => 'ccl', 'Ciclev10014620m.g' => 'ccl', 'Ciclev10015169m.g' => 'ccl', 'Ciclev10018291m.g' => 'ccl', 'Ciclev10028256m.g' => 'ccl', 'Ciclev10033822m.g' => 'ccl', 'CiPaw.05G060300' => 'cil', 'CiPaw.05G085000' => 'cil', 'CiPaw.06G083700' => 'cil', 'CiPaw.06G120300' => 'cil', 'CiPaw.09G060500' => 'cil', 'CiPaw.09G123800' => 'cil', 'CiPaw.11G169700' => 'cil', 'CiPaw.12G118300' => 'cil', 'CiPaw.15G071000' => 'cil', 'CiPaw.15G081900' => 'cil', 'ClCG01G024610' => 'cla', 'ClCG03G006070' => 'cla', 'ClCG05G019250' => 'cla', 'ClCG09G009500' => 'cla', 'ClCG11G008200' => 'cla', 'ClCG11G018080' => 'cla', 'COL.COLO4_17373' => 'col', 'COL.COLO4_22994' => 'col', 'COL.COLO4_26389' => 'col', 'COL.COLO4_27170' => 'col', 'COL.COLO4_31074' => 'col', 'COL.COLO4_31465' => 'col', 'COL.COLO4_36438' => 'col', 'COL.COLO4_36439' => 'col', 'Cpa.g.c38781' => 'cpa', 'Cpa.g.sc128.12' => 'cpa', 'Cpa.g.sc166.7' => 'cpa', 'Cpa.g.sc166.8' => 'cpa', 'Cpa.g.sc20.111' => 'cpa', 'Cpa.g.sc27.31' => 'cpa', 'Cpa.g.sc64.36' => 'cpa', 'Cpa.g.sc64.37' => 'cpa', 'Cpa.g.sc66.49' => 'cpa', 'Cpa.g.sc80.64' => 'cpa', 'CsaV3_1G012320' => 'csa', 'CsaV3_2G008480' => 'csa', 'CsaV3_2G033450' => 'csa', 'CsaV3_3G044830' => 'csa', 'CsaV3_4G033710' => 'csa', 'CsaV3_6G051730' => 'csa', 'CsaV3_7G025350' => 'csa', 'CSS0001067' => 'camsi', 'CSS0005996' => 'camsi', 'CSS0006590' => 'camsi', 'CSS0009673' => 'camsi', 'CSS0010201' => 'camsi', 'CSS0010549' => 'camsi', 'CSS0011364' => 'camsi', 'CSS0014473' => 'camsi', 'CSS0014961' => 'camsi', 'CSS0020191' => 'camsi', 'CSS0021165' => 'camsi', 'CSS0022306' => 'camsi', 'CSS0030591' => 'camsi', 'CSS0030696' => 'camsi', 'CSS0032653' => 'camsi', 'CSS0037487' => 'camsi', 'CSS0041102' => 'camsi', 'CSS0041261' => 'camsi', 'CSS0046246' => 'camsi', 'CSS0049256' => 'camsi', 'DCAR_004075' => 'dca', 'DCAR_011538' => 'dca', 'DCAR_019553' => 'dca', 'DCAR_020952' => 'dca', 'DCAR_021739' => 'dca', 'DCAR_027407' => 'dca', 'DCAR_027913' => 'dca', 'DCAR_028066' => 'dca', 'Dinv05899' => 'din', 'Dinv07563' => 'din', 'Dinv08010' => 'din', 'Dinv14125' => 'din', 'Dinv20172' => 'din', 'Dinv30743' => 'din', 'Dinv31229' => 'din', 'Dinv34162' => 'din', 'Dinv36028' => 'din', 'Dinv39368' => 'din', 'Dinv40565' => 'din', 'Dinv41706' => 'din', 'Duzib052G0089' => 'dzi', 'Duzib116G0641' => 'dzi', 'Duzib132G0069' => 'dzi', 'Duzib132G1219' => 'dzi', 'Duzib147G0278' => 'dzi', 'Duzib160G0480' => 'dzi', 'Duzib170G0661' => 'dzi', 'Duzib177G0591' => 'dzi', 'Duzib187G1353' => 'dzi', 'Duzib192G0858' => 'dzi', 'Duzib192G0883' => 'dzi', 'Duzib213G0506' => 'dzi', 'Duzib235G0289' => 'dzi', 'Duzib251G0422' => 'dzi', 'ECA232G3898' => 'eca', 'ECA233G5950' => 'eca', 'ECA234G1699' => 'eca', 'ECA234G2421' => 'eca', 'ECA236G0426' => 'eca', 'ECA236G4331' => 'eca', 'ECA248G2573' => 'eca', 'EL10Ac1g00077' => 'bvu', 'EL10Ac1g01746' => 'bvu', 'EL10Ac2g03464' => 'bvu', 'EL10Ac4g08176' => 'bvu', 'EL10Ac7g17521' => 'bvu', 'EL10Ac8g20386' => 'bvu', 'EL10Ac9g21343' => 'bvu', 'EL10Ac9g22688' => 'bvu', 'Eucgr.B03434' => 'egr', 'Eucgr.D00618' => 'egr', 'Eucgr.E02395' => 'egr', 'Eucgr.F01129' => 'egr', 'Eucgr.F02622' => 'egr', 'Eucgr.F04207' => 'egr', 'FAN01G0570' => 'fan', 'FAN03G3351' => 'fan', 'FAN06G3702' => 'fan', 'FAN07G2149' => 'fan', 'FAN10G3758' => 'fan', 'FAN11G1170' => 'fan', 'FAN11G2050' => 'fan', 'FAN11G2724' => 'fan', 'FAN12G1700' => 'fan', 'FAN12G2028' => 'fan', 'FAN15G1160' => 'fan', 'FAN15G3063' => 'fan', 'FAN16G2540' => 'fan', 'FAN16G3077' => 'fan', 'FAN16G3624' => 'fan', 'FAN17G0221' => 'fan', 'FAN20G2492' => 'fan', 'FAN20G2905' => 'fan', 'FAN21G0548' => 'fan', 'FAN21G1300' => 'fan', 'FAN22G0077' => 'fan', 'FAN22G1315' => 'fan', 'FAN24G1280' => 'fan', 'FAN24G1445' => 'fan', 'FAN24G3527' => 'fan', 'FAN25G0464' => 'fan', 'FAN25G2885' => 'fan', 'FAN25G3270' => 'fan', 'FAN27G1101' => 'fan', 'FAN27G2846' => 'fan', 'FAN27G3524' => 'fan', 'FvH4_2g11770' => 'fve', 'FvH4_2g15630' => 'fve', 'FvH4_3g05570' => 'fve', 'FvH4_3g09110' => 'fve', 'FvH4_3g19940' => 'fve', 'FvH4_4g04821' => 'fve', 'FvH4_4g31480' => 'fve', 'FvH4_7g01740' => 'fve', 'Glyma.05G130400' => 'gma', 'Glyma.05G156400' => 'gma', 'Glyma.07G197000' => 'gma', 'Glyma.08G085151' => 'gma', 'Glyma.08G114500' => 'gma', 'Glyma.08G300400' => 'gma', 'Glyma.10G215800' => 'gma', 'Glyma.12G224400' => 'gma', 'Glyma.13G179300' => 'gma', 'Glyma.13G218151' => 'gma', 'Glyma.13G238800' => 'gma', 'Glyma.13G276900' => 'gma', 'Glyma.14G078200' => 'gma', 'Glyma.15G074500' => 'gma', 'Glyma.15G094100' => 'gma', 'Glyma.17G247200' => 'gma', 'Glyma.18G120100' => 'gma', 'Glyma.20G176000' => 'gma', 'Gohir.A01G063600' => 'ghi', 'Gohir.A01G170301' => 'ghi', 'Gohir.A02G060500' => 'ghi', 'Gohir.A05G133850' => 'ghi', 'Gohir.A05G161400' => 'ghi', 'Gohir.A06G012900' => 'ghi', 'Gohir.A06G035901' => 'ghi', 'Gohir.A06G127100' => 'ghi', 'Gohir.A06G210500' => 'ghi', 'Gohir.A08G008650' => 'ghi', 'Gohir.A09G072700' => 'ghi', 'Gohir.A09G088301' => 'ghi', 'Gohir.A10G040600' => 'ghi', 'Gohir.A12G036300' => 'ghi', 'Gohir.A12G143350' => 'ghi', 'Gohir.A12G165500' => 'ghi', 'Gohir.A13G145700' => 'ghi', 'Gohir.D01G050000' => 'ghi', 'Gohir.D01G051366' => 'ghi', 'Gohir.D01G161350' => 'ghi', 'Gohir.D02G065900' => 'ghi', 'Gohir.D05G164200' => 'ghi', 'Gohir.D05G355500' => 'ghi', 'Gohir.D06G010400' => 'ghi', 'Gohir.D06G111250' => 'ghi', 'Gohir.D06G132000' => 'ghi', 'Gohir.D06G210500' => 'ghi', 'Gohir.D07G165675' => 'ghi', 'Gohir.D08G062240' => 'ghi', 'Gohir.D08G086101' => 'ghi', 'Gohir.D08G138060' => 'ghi', 'Gohir.D09G072300' => 'ghi', 'Gohir.D10G041400' => 'ghi', 'Gohir.D11G191020' => 'ghi', 'Gohir.D11G212066' => 'ghi', 'Gohir.D12G036300' => 'ghi', 'Gohir.D12G168600' => 'ghi', 'Gohir.D13G150600' => 'ghi', 'Gorai.001G057300' => 'gra', 'Gorai.002G069900' => 'gra', 'Gorai.002G200000' => 'gra', 'Gorai.003G067600' => 'gra', 'Gorai.005G074800' => 'gra', 'Gorai.006G087300' => 'gra', 'Gorai.008G037500' => 'gra', 'Gorai.008G181400' => 'gra', 'Gorai.009G169400' => 'gra', 'Gorai.009G387900' => 'gra', 'Gorai.010G013300' => 'gra', 'Gorai.010G153800' => 'gra', 'Gorai.010G255800' => 'gra', 'Gorai.011G043700' => 'gra', 'Gorai.011G198900' => 'gra', 'Gorai.013G168400' => 'gra', 'GSVIVG01005212001' => 'vvi', 'GSVIVG01006163001' => 'vvi', 'GSVIVG01009625001' => 'vvi', 'GSVIVG01014338001' => 'vvi', 'GSVIVG01020005001' => 'vvi', 'GSVIVG01021450001' => 'vvi', 'GSVIVG01023975001' => 'vvi', 'GSVIVG01034490001' => 'vvi', 'HanXRQChr04g0112071' => 'han', 'HanXRQChr05g0131151' => 'han', 'HanXRQChr09g0262371' => 'han', 'HanXRQChr09g0268401' => 'han', 'HanXRQChr10g0279241' => 'han', 'HanXRQChr10g0297961' => 'han', 'HanXRQChr11g0326231' => 'han', 'HanXRQChr11g0328471' => 'han', 'HanXRQChr16g0507941' => 'han', 'HanXRQChr17g0560211' => 'han', 'Haze_02108' => 'cav', 'Haze_02428' => 'cav', 'Haze_05593' => 'cav', 'Haze_06448' => 'cav', 'Haze_09427' => 'cav', 'Haze_12022' => 'cav', 'Haze_17612' => 'cav', 'Haze_17928' => 'cav', 'Hma1.2p1_0032F.1_g019250' => 'hma', 'Hma1.2p1_0163F.1_g072690' => 'hma', 'Hma1.2p1_0265F.1_g106710' => 'hma', 'Hma1.2p1_0286F.1_g113970' => 'hma', 'Hma1.2p1_0363F.1_g136640' => 'hma', 'Hma1.2p1_0584F.1_g183470' => 'hma', 'Hma1.2p1_0885F.1_g232570' => 'hma', 'HPP92_006022' => 'vpl', 'HPP92_007320' => 'vpl', 'HPP92_011521' => 'vpl', 'HPP92_019387' => 'vpl', 'HPP92_024038' => 'vpl', 'Hund05891' => 'sun', 'Hund06450' => 'sun', 'Hund12053' => 'sun', 'Hund16800' => 'sun', 'Hund21222' => 'sun', 'Hund22896' => 'sun', 'Hund23746' => 'sun', 'Hund27083' => 'sun', 'Lalb_Chr02g0141831' => 'lal', 'Lalb_Chr02g0141841' => 'lal', 'Lalb_Chr05g0220411' => 'lal', 'Lalb_Chr06g0162081' => 'lal', 'Lalb_Chr09g0327651' => 'lal', 'Lalb_Chr13g0295051' => 'lal', 'Lalb_Chr15g0086801' => 'lal', 'Lalb_Chr16g0383781' => 'lal', 'Lalb_Chr16g0383791' => 'lal', 'Lalb_Chr18g0055441' => 'lal', 'Lalb_Chr18g0059611' => 'lal', 'Lalb_Chr20g0109661' => 'lal', 'Lalb_Chr20g0109831' => 'lal', 'Lalb_Chr20g0121871' => 'lal', 'Lalb_Chr22g0355361' => 'lal', 'Lalb_Chr25g0286371' => 'lal', 'Lj1A1187G43' => 'lonja', 'Lj1A1205T50' => 'lonja', 'Lj1A800G33' => 'lonja', 'Lj1C1187T7' => 'lonja', 'Lj1C843T11' => 'lonja', 'Lj1g0010940' => 'lja', 'Lj2A288T69' => 'lonja', 'Lj3g0024276' => 'lja', 'Lj4A47T76' => 'lonja', 'Lj4g0005805' => 'lja', 'Lj4g0006097' => 'lja', 'Lj4g0008528' => 'lja', 'Lj4g0024907' => 'lja', 'Lj5g0012472' => 'lja', 'Lj5g0018648' => 'lja', 'Lj6C789G1' => 'lonja', 'Lj6g0004000' => 'lja', 'Lj7A292G67' => 'lonja', 'Lj7A292T64' => 'lonja', 'Lj9A400T58' => 'lonja', 'Lsat_1_v5_gn_1_126181' => 'lsa', 'Lsat_1_v5_gn_4_123041' => 'lsa', 'Lsat_1_v5_gn_4_133620' => 'lsa', 'Lsat_1_v5_gn_4_53221' => 'lsa', 'Lsat_1_v5_gn_4_71961' => 'lsa', 'Lsat_1_v5_gn_7_105241' => 'lsa', 'Lsat_1_v5_gn_7_21361' => 'lsa', 'Lsat_1_v5_gn_7_28860' => 'lsa', 'Lsat_1_v5_gn_7_31260' => 'lsa', 'Lsat_1_v5_gn_8_52801' => 'lsa', 'Manes.02G191400' => 'mes', 'Manes.03G110100' => 'mes', 'Manes.04G071100' => 'mes', 'Manes.05G100500' => 'mes', 'Manes.05G164700' => 'mes', 'Manes.15G087000' => 'mes', 'Manes.15G121500' => 'mes', 'Manes.16G028300' => 'mes', 'Manes.17G046100' => 'mes', 'Manes.17G069800' => 'mes', 'Manes.18G100500' => 'mes', 'Mapoly0002s0109' => 'mpo', 'Mapoly0024s0007' => 'mpo', 'Mapoly0089s0032' => 'mpo', 'MBI04_g42241_MAGBIO' => 'mbi', 'MBI05_g11988_MAGBIO' => 'mbi', 'MBI05_g35452_MAGBIO' => 'mbi', 'MBI07_g30179_MAGBIO' => 'mbi', 'MBI07_g35859_MAGBIO' => 'mbi', 'MBI07_g35860_MAGBIO' => 'mbi', 'MBI07_g37166_MAGBIO' => 'mbi', 'MBI08_g18172_MAGBIO' => 'mbi', 'MBI09_g08441_MAGBIO' => 'mbi', 'MBI13_g01676_MAGBIO' => 'mbi', 'MBI14_g42955_MAGBIO' => 'mbi', 'MBI16_g13161_MAGBIO' => 'mbi', 'MBI17_g27204_MAGBIO' => 'mbi', 'MBI19_g21595_MAGBIO' => 'mbi', 'MD00G1148400' => 'mdo', 'MD02G1301200' => 'mdo', 'MD03G1227800' => 'mdo', 'MD05G1041100' => 'mdo', 'MD05G1124800' => 'mdo', 'MD05G1284000' => 'mdo', 'MD05G1338800' => 'mdo', 'MD05G1338900' => 'mdo', 'MD07G1022800' => 'mdo', 'MD10G1047500' => 'mdo', 'MD10G1127500' => 'mdo', 'MD10G1262300' => 'mdo', 'MD10G1293800' => 'mdo', 'MD16G1074300' => 'mdo', 'Medtr1g021670' => 'mtr', 'Medtr1g096320' => 'mtr', 'Medtr2g013690' => 'mtr', 'Medtr2g019450' => 'mtr', 'Medtr2g085170' => 'mtr', 'Medtr4g088785' => 'mtr', 'Medtr8g055930' => 'mtr', 'Medtr8g085850' => 'mtr', 'MELO3C002605.2' => 'cme', 'MELO3C003891.2' => 'cme', 'MELO3C004012.2' => 'cme', 'MELO3C007134.2' => 'cme', 'MELO3C008118.2' => 'cme', 'MELO3C016700.2' => 'cme', 'MELO3C024127.2' => 'cme', 'MELO3C033361.2' => 'cme', 'MELO3C033362.2' => 'cme', 'Migut.C00430' => 'egut', 'Migut.C01246' => 'egut', 'Migut.E00101' => 'egut', 'Migut.H01486' => 'egut', 'Migut.H01939' => 'egut', 'Migut.K00360' => 'egut', 'Migut.M00910' => 'egut', 'Migut.M01139' => 'egut', 'Migut.N02677' => 'egut', 'MSTRG.13252' => 'ama', 'MSTRG.14701' => 'ama', 'MSTRG.1521' => 'ama', 'MSTRG.15884' => 'ama', 'MSTRG.16242' => 'ama', 'MSTRG.22285' => 'ama', 'MSTRG.22444' => 'ama', 'MSTRG.2349' => 'ama', 'MSTRG.26308' => 'ama', 'MSTRG.28296' => 'ama', 'MSTRG.9895' => 'ama', 'Nitab4.5_0000110g0060' => 'nta', 'Nitab4.5_0000420g0130' => 'nta', 'Nitab4.5_0000422g0030' => 'nta', 'Nitab4.5_0000560g0180' => 'nta', 'Nitab4.5_0000703g0100' => 'nta', 'Nitab4.5_0000786g0200' => 'nta', 'Nitab4.5_0001336g0020' => 'nta', 'Nitab4.5_0001796g0030' => 'nta', 'Nitab4.5_0003348g0060' => 'nta', 'Nitab4.5_0003698g0040' => 'nta', 'Nitab4.5_0003942g0090' => 'nta', 'Nitab4.5_0004775g0070' => 'nta', 'Nitab4.5_0004864g0030' => 'nta', 'Nitab4.5_0005615g0020' => 'nta', 'Nitab4.5_0009288g0030' => 'nta', 'Nitab4.5_0009341g0010' => 'nta', 'Nitab4.5_0009535g0010' => 'nta', 'Nn1g03995' => 'nnu', 'Nn1g04100' => 'nnu', 'Nn1g06530' => 'nnu', 'Nn3g16404' => 'nnu', 'Nn3g17212' => 'nnu', 'Nn3g20776' => 'nnu', 'Nn3g21923' => 'nnu', 'Nn5g27737' => 'nnu', 'Nn5g29461' => 'nnu', 'Nn7g38355' => 'nnu', 'Nn8g39873' => 'nnu', 'Oeu000548.2' => 'oeu', 'Oeu004672.1' => 'oeu', 'Oeu015605.2' => 'oeu', 'Oeu016092.1' => 'oeu', 'Oeu017879.3' => 'oeu', 'Oeu024910.1' => 'oeu', 'Oeu028965.1' => 'oeu', 'Oeu031269.1' => 'oeu', 'Oeu031270.1' => 'oeu', 'Oeu032535.1' => 'oeu', 'Oeu034151.1' => 'oeu', 'Oeu034152.1' => 'oeu', 'Oeu034588.2' => 'oeu', 'Oeu050846.1' => 'oeu', 'Oeu050849.2' => 'oeu', 'Oeu051063.2' => 'oeu', 'Oeu052368.1' => 'oeu', 'Oeu052370.1' => 'oeu', 'Os01g0210400' => 'osa', 'Os01g0304300' => 'osa', 'Os01g0749100' => 'osa', 'Os02g0745800' => 'osa', 'Os03g0769050' => 'osa', 'Os05g0531500' => 'osa', 'Os06g0724300' => 'osa', 'Os11g0198100' => 'osa', 'Peaxi162Scf00069g01425' => 'pax', 'Peaxi162Scf00280g00811' => 'pax', 'Peaxi162Scf00310g00615' => 'pax', 'Peaxi162Scf00362g00542' => 'pax', 'Peaxi162Scf00461g00310' => 'pax', 'Peaxi162Scf00530g00118' => 'pax', 'Peaxi162Scf00541g00057' => 'pax', 'Peaxi162Scf00661g00017' => 'pax', 'Peaxi162Scf00926g00027' => 'pax', 'Peaxi162Scf01064g00263' => 'pax', 'Peaxi162Scf01211g00135' => 'pax', 'PGR004G2336' => 'pgr', 'PGR042G0327' => 'pgr', 'PGR042G1957' => 'pgr', 'PGR042G2003' => 'pgr', 'PGR042G3929' => 'pgr', 'PGR083G1137' => 'pgr', 'PGR083G1364' => 'pgr', 'PGSC0003DMG400003381' => 'stu', 'PGSC0003DMG400003417' => 'stu', 'PGSC0003DMG400008981' => 'stu', 'PGSC0003DMG400012417' => 'stu', 'PGSC0003DMG400012823' => 'stu', 'PGSC0003DMG400016885' => 'stu', 'PGSC0003DMG400022812' => 'stu', 'PGSC0003DMG400029726' => 'stu', 'PGSC0003DMG401009243' => 'stu', 'PGSC0003DMG401031505' => 'stu', 'PGSC0003DMG402031505' => 'stu', 'Phvul.001G017600' => 'pvu', 'Phvul.002G193500' => 'pvu', 'Phvul.002G228900' => 'pvu', 'Phvul.002G236800' => 'pvu', 'Phvul.003G049500' => 'pvu', 'Phvul.005G072000' => 'pvu', 'Phvul.006G164800' => 'pvu', 'Phvul.006G185100' => 'pvu', 'Phvul.007G090000' => 'pvu', 'Potri.001G399800' => 'ptr', 'Potri.002G149900' => 'ptr', 'Potri.004G044100' => 'ptr', 'Potri.004G177600' => 'ptr', 'Potri.009G138000' => 'ptr', 'Potri.010G094000' => 'ptr', 'Potri.011G053000' => 'ptr', 'Potri.011G119300' => 'ptr', 'Potri.013G113700' => 'ptr', 'Potri.018G107800' => 'ptr', 'Potri.019G084100' => 'ptr', 'Pp3c14_23720' => 'ppa', 'Pp3c16_6340' => 'ppa', 'Pp3c23_13420' => 'ppa', 'Pp3c24_2740' => 'ppa', 'Pp3c25_860' => 'ppa', 'Pp3c8_21750' => 'ppa', 'Prupe.1G273000' => 'ppe', 'Prupe.1G273700' => 'ppe', 'Prupe.1G274100' => 'ppe', 'Prupe.2G023300' => 'ppe', 'Prupe.4G048000' => 'ppe', 'Prupe.4G080400' => 'ppe', 'Prupe.4G181200' => 'ppe', 'Prupe.8G056900' => 'ppe', 'Prupe.8G168700' => 'ppe', 'Psat1g189080' => 'psa', 'Psat1g204760' => 'psa', 'Psat4g175560' => 'psa', 'Psat4g177720' => 'psa', 'Psat5g244240' => 'psa', 'Psat6g010720' => 'psa', 'Psat6g187200' => 'psa', 'Psat7g072040' => 'psa', 'PSO017G3501' => 'pso', 'PSO063G2148' => 'pso', 'PSO063G5608' => 'pso', 'PSO210G6392' => 'pso', 'PSO541G2319' => 'pso', 'PSO541G2836' => 'pso', 'PSO541G4012' => 'pso', 'PSO541G6253' => 'pso', 'PSO675G0580' => 'pso', 'PSO675G0856' => 'pso', 'PSO675G5635' => 'pso', 'PSO675G9157' => 'pso', 'PSO832G1660' => 'pso', 'PSO832G1969' => 'pso', 'QL02p007186' => 'qlo', 'QL02p033904' => 'qlo', 'QL03p064391' => 'qlo', 'QL05p040593' => 'qlo', 'QL05p058242' => 'qlo', 'QL08p021825' => 'qlo', 'QL11p004981' => 'qlo', 'RcHm_v2.0_Chr1g0318301' => 'rch', 'RcHm_v2.0_Chr4g0418501' => 'rch', 'RcHm_v2.0_Chr4g0439971' => 'rch', 'RcHm_v2.0_Chr5g0008541' => 'rch', 'RcHm_v2.0_Chr5g0014101' => 'rch', 'RcHm_v2.0_Chr5g0014131' => 'rch', 'RcHm_v2.0_Chr5g0033621' => 'rch', 'RcHm_v2.0_Chr6g0272041' => 'rch', 'RcHm_v2.0_Chr6g0278831' => 'rch', 'Rhsim02G0130400' => 'rsi', 'Rhsim02G0171100' => 'rsi', 'Rhsim05G0053000' => 'rsi', 'Rhsim05G0053100' => 'rsi', 'Rhsim06G0096500' => 'rsi', 'Rhsim06G0096600' => 'rsi', 'Rhsim06G0199100' => 'rsi', 'Rhsim12G0062300' => 'rsi', 'Rhsim12G0062800' => 'rsi', 'Sabra02G0118600' => 'sbr', 'Sabra04G0027300' => 'sbr', 'Sabra04G0119500' => 'sbr', 'Sabra08G0112500' => 'sbr', 'Sabra11G0036800' => 'sbr', 'Sabra11G0103800' => 'sbr', 'Sabra13G0096300' => 'sbr', 'Sabra16G0262300' => 'sbr', 'Sabra18G0091700' => 'sbr', 'Sabra19G0095400' => 'sbr', 'SalBow6G3080' => 'sbo', 'SalBow7G1157' => 'sbo', 'SalBow7G2123' => 'sbo', 'SalBow7G2285' => 'sbo', 'SalBow7G3537' => 'sbo', 'SalBow8G2947' => 'sbo', 'SalBow8G4463' => 'sbo', 'SalBow8G5466' => 'sbo', 'Sc01g0001750' => 'sci', 'Sc02g0006640' => 'sci', 'Sc02g0006670' => 'sci', 'Sc04g0008220' => 'sci', 'Sc05g0006190' => 'sci', 'Sc08g0002760' => 'sci', 'Sc17g0006170' => 'sci', 'Sc22g0002050' => 'sci', 'Sc23g0001190' => 'sci', 'Sc24g0000980' => 'sci', 'Sed0006245' => 'sed', 'Sed0007543' => 'sed', 'Sed0009411' => 'sed', 'Sed0010765' => 'sed', 'Sed0012944' => 'sed', 'Sed0014682' => 'sed', 'Sed0016174' => 'sed', 'Sed0016796' => 'sed', 'Sed0020317' => 'sed', 'Sed0021467' => 'sed', 'SEGI_01316' => 'sgi', 'SEGI_03374' => 'sgi', 'SEGI_16265' => 'sgi', 'SEGI_18569' => 'sgi', 'SEGI_20351' => 'sgi', 'SEGI_26395' => 'sgi', 'SEGI_29469' => 'sgi', 'SEGI_34771' => 'sgi', 'SEGI_36769' => 'sgi', 'SEGI_37139' => 'sgi', 'SGA_v2.0_scaffold100G29687' => 'sas', 'SGA_v2.0_scaffold118G32472' => 'sas', 'SGA_v2.0_scaffold14G07051' => 'sas', 'SGA_v2.0_scaffold183G39845' => 'sas', 'SGA_v2.0_scaffold1G00174' => 'sas', 'SGA_v2.0_scaffold22G09714' => 'sas', 'SGA_v2.0_scaffold333G48992' => 'sas', 'SGA_v2.0_scaffold46G17491' => 'sas', 'SGA_v2.0_scaffold49G18294' => 'sas', 'SGA_v2.0_scaffold63G21658' => 'sas', 'SHI01741' => 'shi', 'SHI05771' => 'shi', 'SHI18077' => 'shi', 'SHI20525' => 'shi', 'SHI20527' => 'shi', 'SHI20528' => 'shi', 'SMO172G0185' => 'smo', 'SMO198G0020' => 'smo', 'SMO351G0006' => 'smo', 'SMO356G0118' => 'smo', 'SMO358G0296' => 'smo', 'SMO367G0079' => 'smo', 'SMO367G1277' => 'smo', 'Solyc01g014220.3' => 'sly', 'Solyc01g111770.2' => 'sly', 'Solyc02g078180.3' => 'sly', 'Solyc03g006430.3' => 'sly', 'Solyc03g006456.1' => 'sly', 'Solyc03g079860.2' => 'sly', 'Solyc04g079770.3' => 'sly', 'Solyc05g007430.4' => 'sly', 'Solyc07g063150.3' => 'sly', 'Solyc08g016620.3' => 'sly', 'Solyc09g057590.3' => 'sly', 'Solyc09g057600.1' => 'sly', 'Solyc10g009050.3' => 'sly', 'Solyc11g017420.2' => 'sly', 'Sopen01g053810' => 'spe', 'Sopen02g023040' => 'spe', 'Sopen03g002440' => 'spe', 'Sopen04g033350' => 'spe', 'Sopen05g003310' => 'spe', 'Sopen07g004050' => 'spe', 'Sopen07g031340' => 'spe', 'Sopen08g006990' => 'spe', 'Sopen10g004830' => 'spe', 'Sopen11g009370' => 'spe', 'Sp1g24450' => 'spa', 'Sp1g29670' => 'spa', 'Sp1g39600' => 'spa', 'Sp2g11080' => 'spa', 'Sp2g13970' => 'spa', 'Sp4g16130' => 'spa', 'Sp6g13080' => 'spa', 'Sp7g37270' => 'spa', 'TAR371G0065' => 'tar', 'TAR376G0340' => 'tar', 'TAR376G0435' => 'tar', 'TAR381G0002' => 'tar', 'TAR381G1236' => 'tar', 'TAR624G0055' => 'tar', 'TAR624G0324' => 'tar', 'TAR624G0696' => 'tar', 'TAR624G0906' => 'tar', 'TAR625G0107' => 'tar', 'TAR626G0015' => 'tar', 'TAR626G1356' => 'tar', 'TAR627G0888' => 'tar', 'TAR628G0399' => 'tar', 'TAR628G1327' => 'tar', 'TAR629G2831' => 'tar', 'TAR629G2874' => 'tar', 'TAR633G1432' => 'tar', 'TAR633G2771' => 'tar', 'THA.LOC104803394' => 'tha', 'THA.LOC104805153' => 'tha', 'THA.LOC104806784' => 'tha', 'THA.LOC104810473' => 'tha', 'THA.LOC104813100' => 'tha', 'THA.LOC104814215' => 'tha', 'THA.LOC104815554' => 'tha', 'THA.LOC104820544' => 'tha', 'THA.LOC104824754' => 'tha', 'THA.LOC104827717' => 'tha', 'Thecc.02G031400' => 'tca', 'Thecc.02G055900' => 'tca', 'Thecc.02G350800' => 'tca', 'Thecc.06G150900' => 'tca', 'Thecc.06G186600' => 'tca', 'Thecc.07G089600' => 'tca', 'Thecc.08G020400' => 'tca', 'Thecc.08G182100' => 'tca', 'Thhalv10000873m.g' => 'esa', 'Thhalv10004185m.g' => 'esa', 'Thhalv10006981m.g' => 'esa', 'Thhalv10007204m.g' => 'esa', 'Thhalv10011374m.g' => 'esa', 'Thhalv10013482m.g' => 'esa', 'Thhalv10017801m.g' => 'esa', 'Thhalv10024983m.g' => 'esa', 'TPR.G12072' => 'tpr', 'TPR.G15769' => 'tpr', 'TPR.G16504' => 'tpr', 'TPR.G16506' => 'tpr', 'TPR.G24345' => 'tpr', 'TPR.G26666' => 'tpr', 'TPR.G27320' => 'tpr', 'TPR.G31819' => 'tpr', 'TPR.G38879' => 'tpr', 'TPR.G39015' => 'tpr', 'TPR.G8819' => 'tpr', 'TWI09G0924' => 'twi', 'TWI12G0811' => 'twi', 'TWI12G1294' => 'twi', 'TWI31G0150' => 'twi', 'TWI36G1262' => 'twi', 'TWI38G1287' => 'twi', 'TWI38G1633' => 'twi', 'TWI38G1982' => 'twi', 'TWI39G0116' => 'twi', 'TWI60G1011' => 'twi', 'TWI63G0171' => 'twi', 'TWI73G0839' => 'twi', 'TWI79G1511' => 'twi', 'unitig_0.g915' => 'ugi', 'unitig_0.g916' => 'ugi', 'unitig_21.g20219' => 'ugi', 'unitig_21.g20416' => 'ugi', 'unitig_578.g16132' => 'ugi', 'unitig_578.g16718' => 'ugi', 'unitig_62.g23481' => 'ugi', 'unitig_744.g24535' => 'ugi', 'unitig_749.g13525' => 'ugi', 'vmacro01248' => 'vma', 'vmacro02290' => 'vma', 'vmacro10946' => 'vma', 'vmacro11865' => 'vma', 'vmacro12493' => 'vma', 'vmacro17322' => 'vma', 'vmacro21599' => 'vma', 'vmacro23041' => 'vma', 'VMungo0251G0004' => 'vmu', 'VMungo0251G2639' => 'vmu', 'VMungo0251G2967' => 'vmu', 'VMungo0540G0864' => 'vmu', 'VMungo0540G1569' => 'vmu', 'VMungo0647G0317' => 'vmu', 'VMungo0720G1373' => 'vmu', 'VMungo0720G1508' => 'vmu', 'VMungo1080G0485' => 'vmu', 'VMungo1215G3177' => 'vmu', 'Zm00001eb112600' => 'zma', 'Zm00001eb120220' => 'zma', 'Zm00001eb153240' => 'zma', 'Zm00001eb168880' => 'zma', 'Zm00001eb213920' => 'zma', 'Zm00001eb228280' => 'zma', 'Zm00001eb254580' => 'zma', 'Zm00001eb272180' => 'zma', 'Zm00001eb293190' => 'zma', 'Zm00001eb322930' => 'zma', 'Zm00001eb353360' => 'zma', 'Zm00001eb353390' => 'zma', 'Zm00001eb353430' => 'zma', 'Zm00001eb353440' => 'zma', 'Zm00001eb353780' => 'zma' ) $gf_id = 'HOM05D000499' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000499' ) $data_identifier = 'HOM05D000499' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 29, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 12, 'amhyb' => (int) 8, 'aly' => (int) 12, 'aox' => (int) 9, 'arhy' => (int) 26, 'ath' => (int) 8, 'atr' => (int) 7, 'acertr' => (int) 10, 'cqu' => (int) 15, 'bca' => (int) 29, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 11, 'cansat' => (int) 8, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 9, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 8, 'cpa' => (int) 10, 'csa' => (int) 7, 'camsi' => (int) 20, 'dca' => (int) 8, 'din' => (int) 12, 'dzi' => (int) 14, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 6, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 38, 'gra' => (int) 16, 'vvi' => (int) 8, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 5, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 11, 'lja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 11, 'mpo' => (int) 3, 'mbi' => (int) 14, 'mdo' => (int) 14, 'mtr' => (int) 8, 'cme' => (int) 9, 'egut' => (int) 9, 'ama' => (int) 11, 'nta' => (int) 17, 'nnu' => (int) 11, 'oeu' => (int) 18, 'osa' => (int) 8, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 6, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 9, 'rsi' => (int) 9, 'sbr' => (int) 10, 'sbo' => (int) 8, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 10, 'sas' => (int) 10, 'shi' => (int) 6, 'smo' => (int) 7, 'sly' => (int) 14, 'spe' => (int) 10, 'spa' => (int) 8, 'tar' => (int) 19, 'tha' => (int) 10, 'tca' => (int) 8, 'esa' => (int) 8, 'tpr' => (int) 11, 'twi' => (int) 13, 'ugi' => (int) 9, 'vma' => (int) 8, 'vmu' => (int) 10, 'zma' => (int) 15 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb353780' $species_info = array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ) $local_species = 'cfa' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000499', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1066', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p29780' => 'bna', 'A02p33180' => 'bna', 'A03p16470' => 'bna', 'A03p66010' => 'bna', 'A04p25970' => 'bna', 'A06p01270' => 'bna', 'A06p46080' => 'bna', 'A07p11400' => 'bna', 'A08p01840' => 'bna', 'A08p08230' => 'bna', 'A08p25740' => 'bna', 'A09p32070' => 'bna', 'A09p37830' => 'bna', 'A09p42840' => 'bna', 'A09p42850' => 'bna', 'Aa31LG10G2060' => 'aar', 'Aa31LG2G7410' => 'aar', 'Aa31LG6G10200' => 'aar', 'Aa31LG6G16680' => 'aar', 'Aa31LG6G8470' => 'aar', 'Aa31LG9G12730' => 'aar', 'Aa31LG9G13680' => 'aar', 'Aa31LG9G14920' => 'aar', 'Aa31LG9G6650' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4977' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5467' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3254' => 'aag', 'Actinidia02578' => 'ach', 'Actinidia07693' => 'ach', 'Actinidia08413' => 'ach', 'Actinidia08414' => 'ach', 'Actinidia15289' => 'ach', 'Actinidia19871' => 'ach', 'Actinidia21475' => 'ach', 'Actinidia22576' => 'ach', 'Actinidia28327' => 'ach', 'Actinidia32491' => 'ach', 'Actinidia39463' => 'ach', 'Actinidia39571' => 'ach', 'Ah.01g013750' => 'amhyb', 'Ah.01g023210' => 'amhyb', 'Ah.04g164850' => 'amhyb', 'Ah.05g178060' => 'amhyb', 'Ah.07g204270' => 'amhyb', 'Ah.07g208480' => 'amhyb', 'Ah.09g237410' => 'amhyb', 'Ah.14g089460' => 'amhyb', 'AL1G41790' => 'aly', 'AL1G49050' => 'aly', 'AL1G53810' => 'aly', 'AL1G61400' => 'aly', 'AL4G18580' => 'aly', 'AL5G12510' => 'aly', 'AL5G12540' => 'aly', 'AL6G43230' => 'aly', 'AL7G10370' => 'aly', 'AL7G19250' => 'aly', 'AL8G12240' => 'aly', 'AL8G18540' => 'aly', 'Aqoxy1G02409' => 'aox', 'Aqoxy2G03993' => 'aox', 'Aqoxy3G03357' => 'aox', 'Aqoxy4G00785' => 'aox', 'Aqoxy5G02598' => 'aox', 'Aqoxy6G00132' => 'aox', 'Aqoxy7G01776' => 'aox', 'Aqoxy7G02316' => 'aox', 'Aqoxy7G03973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.12AFKW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B8730' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27IQR1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3F75VG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3RE0GA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41TCQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.527VTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FIR39' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5W8UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DA38EV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ63HS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H1I32C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HC27T5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4M8AP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7N3CZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9UVDZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LS1NQA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT1D4B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SKC4TM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCFV76' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF9Q1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQWD9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1ZM88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WE07RT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YCK7VH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJE6Q6' => 'arhy', 'AT1G28240' => 'ath', 'AT1G34550' => 'ath', 'AT1G53040' => 'ath', 'AT2G02910' => 'ath', 'AT4G09630' => 'ath', 'AT4G38500' => 'ath', 'AT5G42660' => 'ath', 'AT5G46220' => 'ath', 'ATR0152G026' => 'atr', 'ATR0564G343' => 'atr', 'ATR0706G151' => 'atr', 'ATR0733G207' => 'atr', 'ATR0751G234' => 'atr', 'ATR0807G048' => 'atr', 'ATR1091G084' => 'atr', 'Atru.chr10.1229' => 'acertr', 'Atru.chr10.1230' => 'acertr', 'Atru.chr10.1874' => 'acertr', 'Atru.chr11.1808' => 'acertr', 'Atru.chr13.1795' => 'acertr', 'Atru.chr13.570' => 'acertr', 'Atru.chr2.2608' => 'acertr', 'Atru.chr2.2609' => 'acertr', 'Atru.chr5.3428' => 'acertr', 'Atru.chr8.1171' => 'acertr', 'AUR62004651' => 'cqu', 'AUR62008675' => 'cqu', 'AUR62010014' => 'cqu', 'AUR62013004' => 'cqu', 'AUR62014825' => 'cqu', 'AUR62015015' => 'cqu', 'AUR62015151' => 'cqu', 'AUR62017020' => 'cqu', 'AUR62019422' => 'cqu', 'AUR62023570' => 'cqu', 'AUR62025571' => 'cqu', 'AUR62029098' => 'cqu', 'AUR62033863' => 'cqu', 'AUR62034296' => 'cqu', 'AUR62040075' => 'cqu', 'BcaB02g07334' => 'bca', 'BcaB02g10575' => 'bca', 'BcaB03g12119' => 'bca', 'BcaB03g12120' => 'bca', 'BcaB03g13945' => 'bca', 'BcaB04g17123' => 'bca', 'BcaB04g17867' => 'bca', 'BcaB04g19839' => 'bca', 'BcaB07g30317' => 'bca', 'BcaB07g32432' => 'bca', 'BcaB07g33362' => 'bca', 'BcaB08g36611' => 'bca', 'BcaC01g00028' => 'bca', 'BcaC01g01356' => 'bca', 'BcaC01g02034' => 'bca', 'BcaC01g06051' => 'bca', 'BcaC03g16839' => 'bca', 'BcaC03g17176' => 'bca', 'BcaC05g26829' => 'bca', 'BcaC06g31490' => 'bca', 'BcaC06g35344' => 'bca', 'BcaC06g36570' => 'bca', 'BcaC07g37537' => 'bca', 'BcaC08g43491' => 'bca', 'BcaC08g43773' => 'bca', 'BcaNung00234' => 'bca', 'BcaNung01982' => 'bca', 'BcaNung03707' => 'bca', 'BcaNung06454' => 'bca', 'BolC2t10762H' => 'bol', 'BolC2t11191H' => 'bol', 'BolC3t14322H' => 'bol', 'BolC3t19747H' => 'bol', 'BolC3t21425H' => 'bol', 'BolC4t27800H' => 'bol', 'BolC5t31423H' => 'bol', 'BolC6t35951H' => 'bol', 'BolC6t36282H' => 'bol', 'BolC7t40678H' => 'bol', 'BolC7t40679H' => 'bol', 'BolC7t42222H' => 'bol', 'BolC7t43492H' => 'bol', 'BolC7t46785H' => 'bol', 'BolC8t47853H' => 'bol', 'BolC9t56805H' => 'bol', 'BraA02t08000Z' => 'bra', 'BraA02t08341Z' => 'bra', 'BraA03t10936Z' => 'bra', 'BraA03t15657Z' => 'bra', 'BraA04t18100Z' => 'bra', 'BraA05t20523Z' => 'bra', 'BraA06t23353Z' => 'bra', 'BraA06t27473Z' => 'bra', 'BraA06t27769Z' => 'bra', 'BraA07t28928Z' => 'bra', 'BraA08t32236Z' => 'bra', 'BraA08t32841Z' => 'bra', 'BraA08t34524Z' => 'bra', 'BraA09t38742Z' => 'bra', 'BraA09t39295Z' => 'bra', 'C02p47180' => 'bna', 'C02p50990' => 'bna', 'C03p19360' => 'bna', 'C03p74950' => 'bna', 'C03p91000' => 'bna', 'C04p63260' => 'bna', 'C05p27050' => 'bna', 'C06p08750' => 'bna', 'C06p11490' => 'bna', 'C07p02820' => 'bna', 'C07p17180' => 'bna', 'C07p29440' => 'bna', 'C07p63730' => 'bna', 'C09p39260' => 'bna', 'CAN.G1164.34' => 'can', 'CAN.G1164.39' => 'can', 'CAN.G1530.3' => 'can', 'CAN.G162.61' => 'can', 'CAN.G176.6' => 'can', 'CAN.G289.49' => 'can', 'CAN.G370.21' => 'can', 'CAN.G370.22' => 'can', 'CAN.G371.117' => 'can', 'CAN.G58.37' => 'can', 'CAN.G588.98' => 'can', 'CANSAT21G2266' => 'cansat', 'CANSAT25G2799' => 'cansat', 'CANSAT35G0862' => 'cansat', 'CANSAT35G1704' => 'cansat', 'CANSAT35G1760' => 'cansat', 'CANSAT56G3971' => 'cansat', 'CANSAT56G4116' => 'cansat', 'CANSAT80G1259' => 'cansat', 'CARHR027730' => 'chi', 'CARHR033880' => 'chi', 'CARHR043270' => 'chi', 'CARHR145330' => 'chi', 'CARHR145340' => 'chi', 'CARHR175570' => 'chi', 'CARHR181570' => 'chi', 'CARHR258470' => 'chi', 'CARHR260490' => 'chi', 'CARHR294220' => 'chi', 'Carub.0001s2668' => 'cru', 'Carub.0001s3257' => 'cru', 'Carub.0001s4220' => 'cru', 'Carub.0005s0179' => 'cru', 'Carub.0006s2807' => 'cru', 'Carub.0007s0039' => 'cru', 'Carub.0008s0169' => 'cru', 'Carub.0008s0636' => 'cru', 'Ca_00338_v3' => 'car', 'Ca_00542_v3' => 'car', 'Ca_01844_v3' => 'car', 'Ca_10611_v3' => 'car', 'Ca_13326_v3' => 'car', 'Ca_17944_v3' => 'car', 'Ca_18546_v3' => 'car', 'Ca_24219_v3' => 'car', 'Ca_29972_v3' => 'car', 'CBR_g3681' => 'cbr', 'CBR_g40021' => 'cbr', 'Cc01_g08140' => 'ccan', 'Cc02_g13410' => 'ccan', 'Cc02_g37480' => 'ccan', 'Cc05_g12030' => 'ccan', 'Cc09_g03370' => 'ccan', 'Cc09_g10300' => 'ccan', 'Cc10_g03530' => 'ccan', 'Cc10_g11380' => 'ccan', 'CDE01G0176' => 'cde', 'CDE02G0675' => 'cde', 'CDE02G0942' => 'cde', 'CDE02G1153' => 'cde', 'CDE02G4177' => 'cde', 'CDE04G2117' => 'cde', 'CDE04G2736' => 'cde', 'CDE08G1161' => 'cde', 'CDE09G1238' => 'cde', 'Cfa000467' => 'cfa', 'Cfa000947' => 'cfa', 'Cfa004969' => 'cfa', 'Cfa005284' => 'cfa', 'Cfa008993' => 'cfa', 'Cfa018187' => 'cfa', 'Cfa018454' => 'cfa', 'Cfa020585' => 'cfa', 'Ciclev10000424m.g' => 'ccl', 'Ciclev10003605m.g' => 'ccl', 'Ciclev10007828m.g' => 'ccl', 'Ciclev10014620m.g' => 'ccl', 'Ciclev10015169m.g' => 'ccl', 'Ciclev10018291m.g' => 'ccl', 'Ciclev10028256m.g' => 'ccl', 'Ciclev10033822m.g' => 'ccl', 'CiPaw.05G060300' => 'cil', 'CiPaw.05G085000' => 'cil', 'CiPaw.06G083700' => 'cil', 'CiPaw.06G120300' => 'cil', 'CiPaw.09G060500' => 'cil', 'CiPaw.09G123800' => 'cil', 'CiPaw.11G169700' => 'cil', 'CiPaw.12G118300' => 'cil', 'CiPaw.15G071000' => 'cil', 'CiPaw.15G081900' => 'cil', 'ClCG01G024610' => 'cla', 'ClCG03G006070' => 'cla', 'ClCG05G019250' => 'cla', 'ClCG09G009500' => 'cla', 'ClCG11G008200' => 'cla', 'ClCG11G018080' => 'cla', 'COL.COLO4_17373' => 'col', 'COL.COLO4_22994' => 'col', 'COL.COLO4_26389' => 'col', 'COL.COLO4_27170' => 'col', 'COL.COLO4_31074' => 'col', 'COL.COLO4_31465' => 'col', 'COL.COLO4_36438' => 'col', 'COL.COLO4_36439' => 'col', 'Cpa.g.c38781' => 'cpa', 'Cpa.g.sc128.12' => 'cpa', 'Cpa.g.sc166.7' => 'cpa', 'Cpa.g.sc166.8' => 'cpa', 'Cpa.g.sc20.111' => 'cpa', 'Cpa.g.sc27.31' => 'cpa', 'Cpa.g.sc64.36' => 'cpa', 'Cpa.g.sc64.37' => 'cpa', 'Cpa.g.sc66.49' => 'cpa', 'Cpa.g.sc80.64' => 'cpa', 'CsaV3_1G012320' => 'csa', 'CsaV3_2G008480' => 'csa', 'CsaV3_2G033450' => 'csa', 'CsaV3_3G044830' => 'csa', 'CsaV3_4G033710' => 'csa', 'CsaV3_6G051730' => 'csa', 'CsaV3_7G025350' => 'csa', 'CSS0001067' => 'camsi', 'CSS0005996' => 'camsi', 'CSS0006590' => 'camsi', 'CSS0009673' => 'camsi', 'CSS0010201' => 'camsi', 'CSS0010549' => 'camsi', 'CSS0011364' => 'camsi', 'CSS0014473' => 'camsi', 'CSS0014961' => 'camsi', 'CSS0020191' => 'camsi', 'CSS0021165' => 'camsi', 'CSS0022306' => 'camsi', 'CSS0030591' => 'camsi', 'CSS0030696' => 'camsi', 'CSS0032653' => 'camsi', 'CSS0037487' => 'camsi', 'CSS0041102' => 'camsi', 'CSS0041261' => 'camsi', 'CSS0046246' => 'camsi', 'CSS0049256' => 'camsi', 'DCAR_004075' => 'dca', 'DCAR_011538' => 'dca', 'DCAR_019553' => 'dca', 'DCAR_020952' => 'dca', 'DCAR_021739' => 'dca', 'DCAR_027407' => 'dca', 'DCAR_027913' => 'dca', 'DCAR_028066' => 'dca', 'Dinv05899' => 'din', 'Dinv07563' => 'din', 'Dinv08010' => 'din', 'Dinv14125' => 'din', 'Dinv20172' => 'din', 'Dinv30743' => 'din', 'Dinv31229' => 'din', 'Dinv34162' => 'din', 'Dinv36028' => 'din', 'Dinv39368' => 'din', 'Dinv40565' => 'din', 'Dinv41706' => 'din', 'Duzib052G0089' => 'dzi', 'Duzib116G0641' => 'dzi', 'Duzib132G0069' => 'dzi', 'Duzib132G1219' => 'dzi', 'Duzib147G0278' => 'dzi', 'Duzib160G0480' => 'dzi', 'Duzib170G0661' => 'dzi', 'Duzib177G0591' => 'dzi', 'Duzib187G1353' => 'dzi', 'Duzib192G0858' => 'dzi', 'Duzib192G0883' => 'dzi', 'Duzib213G0506' => 'dzi', 'Duzib235G0289' => 'dzi', 'Duzib251G0422' => 'dzi', 'ECA232G3898' => 'eca', 'ECA233G5950' => 'eca', 'ECA234G1699' => 'eca', 'ECA234G2421' => 'eca', 'ECA236G0426' => 'eca', 'ECA236G4331' => 'eca', 'ECA248G2573' => 'eca', 'EL10Ac1g00077' => 'bvu', 'EL10Ac1g01746' => 'bvu', 'EL10Ac2g03464' => 'bvu', 'EL10Ac4g08176' => 'bvu', 'EL10Ac7g17521' => 'bvu', 'EL10Ac8g20386' => 'bvu', 'EL10Ac9g21343' => 'bvu', 'EL10Ac9g22688' => 'bvu', 'Eucgr.B03434' => 'egr', 'Eucgr.D00618' => 'egr', 'Eucgr.E02395' => 'egr', 'Eucgr.F01129' => 'egr', 'Eucgr.F02622' => 'egr', 'Eucgr.F04207' => 'egr', 'FAN01G0570' => 'fan', 'FAN03G3351' => 'fan', 'FAN06G3702' => 'fan', 'FAN07G2149' => 'fan', 'FAN10G3758' => 'fan', 'FAN11G1170' => 'fan', 'FAN11G2050' => 'fan', 'FAN11G2724' => 'fan', 'FAN12G1700' => 'fan', 'FAN12G2028' => 'fan', 'FAN15G1160' => 'fan', 'FAN15G3063' => 'fan', 'FAN16G2540' => 'fan', 'FAN16G3077' => 'fan', 'FAN16G3624' => 'fan', 'FAN17G0221' => 'fan', 'FAN20G2492' => 'fan', 'FAN20G2905' => 'fan', 'FAN21G0548' => 'fan', 'FAN21G1300' => 'fan', 'FAN22G0077' => 'fan', 'FAN22G1315' => 'fan', 'FAN24G1280' => 'fan', 'FAN24G1445' => 'fan', 'FAN24G3527' => 'fan', 'FAN25G0464' => 'fan', 'FAN25G2885' => 'fan', 'FAN25G3270' => 'fan', 'FAN27G1101' => 'fan', 'FAN27G2846' => 'fan', 'FAN27G3524' => 'fan', 'FvH4_2g11770' => 'fve', 'FvH4_2g15630' => 'fve', 'FvH4_3g05570' => 'fve', 'FvH4_3g09110' => 'fve', 'FvH4_3g19940' => 'fve', 'FvH4_4g04821' => 'fve', 'FvH4_4g31480' => 'fve', 'FvH4_7g01740' => 'fve', 'Glyma.05G130400' => 'gma', 'Glyma.05G156400' => 'gma', 'Glyma.07G197000' => 'gma', 'Glyma.08G085151' => 'gma', 'Glyma.08G114500' => 'gma', 'Glyma.08G300400' => 'gma', 'Glyma.10G215800' => 'gma', 'Glyma.12G224400' => 'gma', 'Glyma.13G179300' => 'gma', 'Glyma.13G218151' => 'gma', 'Glyma.13G238800' => 'gma', 'Glyma.13G276900' => 'gma', 'Glyma.14G078200' => 'gma', 'Glyma.15G074500' => 'gma', 'Glyma.15G094100' => 'gma', 'Glyma.17G247200' => 'gma', 'Glyma.18G120100' => 'gma', 'Glyma.20G176000' => 'gma', 'Gohir.A01G063600' => 'ghi', 'Gohir.A01G170301' => 'ghi', 'Gohir.A02G060500' => 'ghi', 'Gohir.A05G133850' => 'ghi', 'Gohir.A05G161400' => 'ghi', 'Gohir.A06G012900' => 'ghi', 'Gohir.A06G035901' => 'ghi', 'Gohir.A06G127100' => 'ghi', 'Gohir.A06G210500' => 'ghi', 'Gohir.A08G008650' => 'ghi', 'Gohir.A09G072700' => 'ghi', 'Gohir.A09G088301' => 'ghi', 'Gohir.A10G040600' => 'ghi', 'Gohir.A12G036300' => 'ghi', 'Gohir.A12G143350' => 'ghi', 'Gohir.A12G165500' => 'ghi', 'Gohir.A13G145700' => 'ghi', 'Gohir.D01G050000' => 'ghi', 'Gohir.D01G051366' => 'ghi', 'Gohir.D01G161350' => 'ghi', 'Gohir.D02G065900' => 'ghi', 'Gohir.D05G164200' => 'ghi', 'Gohir.D05G355500' => 'ghi', 'Gohir.D06G010400' => 'ghi', 'Gohir.D06G111250' => 'ghi', 'Gohir.D06G132000' => 'ghi', 'Gohir.D06G210500' => 'ghi', 'Gohir.D07G165675' => 'ghi', 'Gohir.D08G062240' => 'ghi', 'Gohir.D08G086101' => 'ghi', 'Gohir.D08G138060' => 'ghi', 'Gohir.D09G072300' => 'ghi', 'Gohir.D10G041400' => 'ghi', 'Gohir.D11G191020' => 'ghi', 'Gohir.D11G212066' => 'ghi', 'Gohir.D12G036300' => 'ghi', 'Gohir.D12G168600' => 'ghi', 'Gohir.D13G150600' => 'ghi', 'Gorai.001G057300' => 'gra', 'Gorai.002G069900' => 'gra', 'Gorai.002G200000' => 'gra', 'Gorai.003G067600' => 'gra', 'Gorai.005G074800' => 'gra', 'Gorai.006G087300' => 'gra', 'Gorai.008G037500' => 'gra', 'Gorai.008G181400' => 'gra', 'Gorai.009G169400' => 'gra', 'Gorai.009G387900' => 'gra', 'Gorai.010G013300' => 'gra', 'Gorai.010G153800' => 'gra', 'Gorai.010G255800' => 'gra', 'Gorai.011G043700' => 'gra', 'Gorai.011G198900' => 'gra', 'Gorai.013G168400' => 'gra', 'GSVIVG01005212001' => 'vvi', 'GSVIVG01006163001' => 'vvi', 'GSVIVG01009625001' => 'vvi', 'GSVIVG01014338001' => 'vvi', 'GSVIVG01020005001' => 'vvi', 'GSVIVG01021450001' => 'vvi', 'GSVIVG01023975001' => 'vvi', 'GSVIVG01034490001' => 'vvi', 'HanXRQChr04g0112071' => 'han', 'HanXRQChr05g0131151' => 'han', 'HanXRQChr09g0262371' => 'han', 'HanXRQChr09g0268401' => 'han', 'HanXRQChr10g0279241' => 'han', 'HanXRQChr10g0297961' => 'han', 'HanXRQChr11g0326231' => 'han', 'HanXRQChr11g0328471' => 'han', 'HanXRQChr16g0507941' => 'han', 'HanXRQChr17g0560211' => 'han', 'Haze_02108' => 'cav', 'Haze_02428' => 'cav', 'Haze_05593' => 'cav', 'Haze_06448' => 'cav', 'Haze_09427' => 'cav', 'Haze_12022' => 'cav', 'Haze_17612' => 'cav', 'Haze_17928' => 'cav', 'Hma1.2p1_0032F.1_g019250' => 'hma', 'Hma1.2p1_0163F.1_g072690' => 'hma', 'Hma1.2p1_0265F.1_g106710' => 'hma', 'Hma1.2p1_0286F.1_g113970' => 'hma', 'Hma1.2p1_0363F.1_g136640' => 'hma', 'Hma1.2p1_0584F.1_g183470' => 'hma', 'Hma1.2p1_0885F.1_g232570' => 'hma', 'HPP92_006022' => 'vpl', 'HPP92_007320' => 'vpl', 'HPP92_011521' => 'vpl', 'HPP92_019387' => 'vpl', 'HPP92_024038' => 'vpl', 'Hund05891' => 'sun', 'Hund06450' => 'sun', 'Hund12053' => 'sun', 'Hund16800' => 'sun', 'Hund21222' => 'sun', 'Hund22896' => 'sun', 'Hund23746' => 'sun', 'Hund27083' => 'sun', 'Lalb_Chr02g0141831' => 'lal', 'Lalb_Chr02g0141841' => 'lal', 'Lalb_Chr05g0220411' => 'lal', 'Lalb_Chr06g0162081' => 'lal', 'Lalb_Chr09g0327651' => 'lal', 'Lalb_Chr13g0295051' => 'lal', 'Lalb_Chr15g0086801' => 'lal', 'Lalb_Chr16g0383781' => 'lal', 'Lalb_Chr16g0383791' => 'lal', 'Lalb_Chr18g0055441' => 'lal', 'Lalb_Chr18g0059611' => 'lal', 'Lalb_Chr20g0109661' => 'lal', 'Lalb_Chr20g0109831' => 'lal', 'Lalb_Chr20g0121871' => 'lal', 'Lalb_Chr22g0355361' => 'lal', 'Lalb_Chr25g0286371' => 'lal', 'Lj1A1187G43' => 'lonja', 'Lj1A1205T50' => 'lonja', 'Lj1A800G33' => 'lonja', 'Lj1C1187T7' => 'lonja', 'Lj1C843T11' => 'lonja', 'Lj1g0010940' => 'lja', 'Lj2A288T69' => 'lonja', 'Lj3g0024276' => 'lja', 'Lj4A47T76' => 'lonja', 'Lj4g0005805' => 'lja', 'Lj4g0006097' => 'lja', 'Lj4g0008528' => 'lja', 'Lj4g0024907' => 'lja', 'Lj5g0012472' => 'lja', 'Lj5g0018648' => 'lja', 'Lj6C789G1' => 'lonja', 'Lj6g0004000' => 'lja', 'Lj7A292G67' => 'lonja', 'Lj7A292T64' => 'lonja', 'Lj9A400T58' => 'lonja', 'Lsat_1_v5_gn_1_126181' => 'lsa', 'Lsat_1_v5_gn_4_123041' => 'lsa', 'Lsat_1_v5_gn_4_133620' => 'lsa', 'Lsat_1_v5_gn_4_53221' => 'lsa', 'Lsat_1_v5_gn_4_71961' => 'lsa', 'Lsat_1_v5_gn_7_105241' => 'lsa', 'Lsat_1_v5_gn_7_21361' => 'lsa', 'Lsat_1_v5_gn_7_28860' => 'lsa', 'Lsat_1_v5_gn_7_31260' => 'lsa', 'Lsat_1_v5_gn_8_52801' => 'lsa', 'Manes.02G191400' => 'mes', 'Manes.03G110100' => 'mes', 'Manes.04G071100' => 'mes', 'Manes.05G100500' => 'mes', 'Manes.05G164700' => 'mes', 'Manes.15G087000' => 'mes', 'Manes.15G121500' => 'mes', 'Manes.16G028300' => 'mes', 'Manes.17G046100' => 'mes', 'Manes.17G069800' => 'mes', 'Manes.18G100500' => 'mes', 'Mapoly0002s0109' => 'mpo', 'Mapoly0024s0007' => 'mpo', 'Mapoly0089s0032' => 'mpo', 'MBI04_g42241_MAGBIO' => 'mbi', 'MBI05_g11988_MAGBIO' => 'mbi', 'MBI05_g35452_MAGBIO' => 'mbi', 'MBI07_g30179_MAGBIO' => 'mbi', 'MBI07_g35859_MAGBIO' => 'mbi', 'MBI07_g35860_MAGBIO' => 'mbi', 'MBI07_g37166_MAGBIO' => 'mbi', 'MBI08_g18172_MAGBIO' => 'mbi', 'MBI09_g08441_MAGBIO' => 'mbi', 'MBI13_g01676_MAGBIO' => 'mbi', 'MBI14_g42955_MAGBIO' => 'mbi', 'MBI16_g13161_MAGBIO' => 'mbi', 'MBI17_g27204_MAGBIO' => 'mbi', 'MBI19_g21595_MAGBIO' => 'mbi', 'MD00G1148400' => 'mdo', 'MD02G1301200' => 'mdo', 'MD03G1227800' => 'mdo', 'MD05G1041100' => 'mdo', 'MD05G1124800' => 'mdo', 'MD05G1284000' => 'mdo', 'MD05G1338800' => 'mdo', 'MD05G1338900' => 'mdo', 'MD07G1022800' => 'mdo', 'MD10G1047500' => 'mdo', 'MD10G1127500' => 'mdo', 'MD10G1262300' => 'mdo', 'MD10G1293800' => 'mdo', 'MD16G1074300' => 'mdo', 'Medtr1g021670' => 'mtr', 'Medtr1g096320' => 'mtr', 'Medtr2g013690' => 'mtr', 'Medtr2g019450' => 'mtr', 'Medtr2g085170' => 'mtr', 'Medtr4g088785' => 'mtr', 'Medtr8g055930' => 'mtr', 'Medtr8g085850' => 'mtr', 'MELO3C002605.2' => 'cme', 'MELO3C003891.2' => 'cme', 'MELO3C004012.2' => 'cme', 'MELO3C007134.2' => 'cme', 'MELO3C008118.2' => 'cme', 'MELO3C016700.2' => 'cme', 'MELO3C024127.2' => 'cme', 'MELO3C033361.2' => 'cme', 'MELO3C033362.2' => 'cme', 'Migut.C00430' => 'egut', 'Migut.C01246' => 'egut', 'Migut.E00101' => 'egut', 'Migut.H01486' => 'egut', 'Migut.H01939' => 'egut', 'Migut.K00360' => 'egut', 'Migut.M00910' => 'egut', 'Migut.M01139' => 'egut', 'Migut.N02677' => 'egut', 'MSTRG.13252' => 'ama', 'MSTRG.14701' => 'ama', 'MSTRG.1521' => 'ama', 'MSTRG.15884' => 'ama', 'MSTRG.16242' => 'ama', 'MSTRG.22285' => 'ama', 'MSTRG.22444' => 'ama', 'MSTRG.2349' => 'ama', 'MSTRG.26308' => 'ama', 'MSTRG.28296' => 'ama', 'MSTRG.9895' => 'ama', 'Nitab4.5_0000110g0060' => 'nta', 'Nitab4.5_0000420g0130' => 'nta', 'Nitab4.5_0000422g0030' => 'nta', 'Nitab4.5_0000560g0180' => 'nta', 'Nitab4.5_0000703g0100' => 'nta', 'Nitab4.5_0000786g0200' => 'nta', 'Nitab4.5_0001336g0020' => 'nta', 'Nitab4.5_0001796g0030' => 'nta', 'Nitab4.5_0003348g0060' => 'nta', 'Nitab4.5_0003698g0040' => 'nta', 'Nitab4.5_0003942g0090' => 'nta', 'Nitab4.5_0004775g0070' => 'nta', 'Nitab4.5_0004864g0030' => 'nta', 'Nitab4.5_0005615g0020' => 'nta', 'Nitab4.5_0009288g0030' => 'nta', 'Nitab4.5_0009341g0010' => 'nta', 'Nitab4.5_0009535g0010' => 'nta', 'Nn1g03995' => 'nnu', 'Nn1g04100' => 'nnu', 'Nn1g06530' => 'nnu', 'Nn3g16404' => 'nnu', 'Nn3g17212' => 'nnu', 'Nn3g20776' => 'nnu', 'Nn3g21923' => 'nnu', 'Nn5g27737' => 'nnu', 'Nn5g29461' => 'nnu', 'Nn7g38355' => 'nnu', 'Nn8g39873' => 'nnu', 'Oeu000548.2' => 'oeu', 'Oeu004672.1' => 'oeu', 'Oeu015605.2' => 'oeu', 'Oeu016092.1' => 'oeu', 'Oeu017879.3' => 'oeu', 'Oeu024910.1' => 'oeu', 'Oeu028965.1' => 'oeu', 'Oeu031269.1' => 'oeu', 'Oeu031270.1' => 'oeu', 'Oeu032535.1' => 'oeu', 'Oeu034151.1' => 'oeu', 'Oeu034152.1' => 'oeu', 'Oeu034588.2' => 'oeu', 'Oeu050846.1' => 'oeu', 'Oeu050849.2' => 'oeu', 'Oeu051063.2' => 'oeu', 'Oeu052368.1' => 'oeu', 'Oeu052370.1' => 'oeu', 'Os01g0210400' => 'osa', 'Os01g0304300' => 'osa', 'Os01g0749100' => 'osa', 'Os02g0745800' => 'osa', 'Os03g0769050' => 'osa', 'Os05g0531500' => 'osa', 'Os06g0724300' => 'osa', 'Os11g0198100' => 'osa', 'Peaxi162Scf00069g01425' => 'pax', 'Peaxi162Scf00280g00811' => 'pax', 'Peaxi162Scf00310g00615' => 'pax', 'Peaxi162Scf00362g00542' => 'pax', 'Peaxi162Scf00461g00310' => 'pax', 'Peaxi162Scf00530g00118' => 'pax', 'Peaxi162Scf00541g00057' => 'pax', 'Peaxi162Scf00661g00017' => 'pax', 'Peaxi162Scf00926g00027' => 'pax', 'Peaxi162Scf01064g00263' => 'pax', 'Peaxi162Scf01211g00135' => 'pax', 'PGR004G2336' => 'pgr', 'PGR042G0327' => 'pgr', 'PGR042G1957' => 'pgr', 'PGR042G2003' => 'pgr', 'PGR042G3929' => 'pgr', 'PGR083G1137' => 'pgr', 'PGR083G1364' => 'pgr', 'PGSC0003DMG400003381' => 'stu', 'PGSC0003DMG400003417' => 'stu', 'PGSC0003DMG400008981' => 'stu', 'PGSC0003DMG400012417' => 'stu', 'PGSC0003DMG400012823' => 'stu', 'PGSC0003DMG400016885' => 'stu', 'PGSC0003DMG400022812' => 'stu', 'PGSC0003DMG400029726' => 'stu', 'PGSC0003DMG401009243' => 'stu', 'PGSC0003DMG401031505' => 'stu', 'PGSC0003DMG402031505' => 'stu', 'Phvul.001G017600' => 'pvu', 'Phvul.002G193500' => 'pvu', 'Phvul.002G228900' => 'pvu', 'Phvul.002G236800' => 'pvu', 'Phvul.003G049500' => 'pvu', 'Phvul.005G072000' => 'pvu', 'Phvul.006G164800' => 'pvu', 'Phvul.006G185100' => 'pvu', 'Phvul.007G090000' => 'pvu', 'Potri.001G399800' => 'ptr', 'Potri.002G149900' => 'ptr', 'Potri.004G044100' => 'ptr', 'Potri.004G177600' => 'ptr', 'Potri.009G138000' => 'ptr', 'Potri.010G094000' => 'ptr', 'Potri.011G053000' => 'ptr', 'Potri.011G119300' => 'ptr', 'Potri.013G113700' => 'ptr', 'Potri.018G107800' => 'ptr', 'Potri.019G084100' => 'ptr', 'Pp3c14_23720' => 'ppa', 'Pp3c16_6340' => 'ppa', 'Pp3c23_13420' => 'ppa', 'Pp3c24_2740' => 'ppa', 'Pp3c25_860' => 'ppa', 'Pp3c8_21750' => 'ppa', 'Prupe.1G273000' => 'ppe', 'Prupe.1G273700' => 'ppe', 'Prupe.1G274100' => 'ppe', 'Prupe.2G023300' => 'ppe', 'Prupe.4G048000' => 'ppe', 'Prupe.4G080400' => 'ppe', 'Prupe.4G181200' => 'ppe', 'Prupe.8G056900' => 'ppe', 'Prupe.8G168700' => 'ppe', 'Psat1g189080' => 'psa', 'Psat1g204760' => 'psa', 'Psat4g175560' => 'psa', 'Psat4g177720' => 'psa', 'Psat5g244240' => 'psa', 'Psat6g010720' => 'psa', 'Psat6g187200' => 'psa', 'Psat7g072040' => 'psa', 'PSO017G3501' => 'pso', 'PSO063G2148' => 'pso', 'PSO063G5608' => 'pso', 'PSO210G6392' => 'pso', 'PSO541G2319' => 'pso', 'PSO541G2836' => 'pso', 'PSO541G4012' => 'pso', 'PSO541G6253' => 'pso', 'PSO675G0580' => 'pso', 'PSO675G0856' => 'pso', 'PSO675G5635' => 'pso', 'PSO675G9157' => 'pso', 'PSO832G1660' => 'pso', 'PSO832G1969' => 'pso', 'QL02p007186' => 'qlo', 'QL02p033904' => 'qlo', 'QL03p064391' => 'qlo', 'QL05p040593' => 'qlo', 'QL05p058242' => 'qlo', 'QL08p021825' => 'qlo', 'QL11p004981' => 'qlo', 'RcHm_v2.0_Chr1g0318301' => 'rch', 'RcHm_v2.0_Chr4g0418501' => 'rch', 'RcHm_v2.0_Chr4g0439971' => 'rch', 'RcHm_v2.0_Chr5g0008541' => 'rch', 'RcHm_v2.0_Chr5g0014101' => 'rch', 'RcHm_v2.0_Chr5g0014131' => 'rch', 'RcHm_v2.0_Chr5g0033621' => 'rch', 'RcHm_v2.0_Chr6g0272041' => 'rch', 'RcHm_v2.0_Chr6g0278831' => 'rch', 'Rhsim02G0130400' => 'rsi', 'Rhsim02G0171100' => 'rsi', 'Rhsim05G0053000' => 'rsi', 'Rhsim05G0053100' => 'rsi', 'Rhsim06G0096500' => 'rsi', 'Rhsim06G0096600' => 'rsi', 'Rhsim06G0199100' => 'rsi', 'Rhsim12G0062300' => 'rsi', 'Rhsim12G0062800' => 'rsi', 'Sabra02G0118600' => 'sbr', 'Sabra04G0027300' => 'sbr', 'Sabra04G0119500' => 'sbr', 'Sabra08G0112500' => 'sbr', 'Sabra11G0036800' => 'sbr', 'Sabra11G0103800' => 'sbr', 'Sabra13G0096300' => 'sbr', 'Sabra16G0262300' => 'sbr', 'Sabra18G0091700' => 'sbr', 'Sabra19G0095400' => 'sbr', 'SalBow6G3080' => 'sbo', 'SalBow7G1157' => 'sbo', 'SalBow7G2123' => 'sbo', 'SalBow7G2285' => 'sbo', 'SalBow7G3537' => 'sbo', 'SalBow8G2947' => 'sbo', 'SalBow8G4463' => 'sbo', 'SalBow8G5466' => 'sbo', 'Sc01g0001750' => 'sci', 'Sc02g0006640' => 'sci', 'Sc02g0006670' => 'sci', 'Sc04g0008220' => 'sci', 'Sc05g0006190' => 'sci', 'Sc08g0002760' => 'sci', 'Sc17g0006170' => 'sci', 'Sc22g0002050' => 'sci', 'Sc23g0001190' => 'sci', 'Sc24g0000980' => 'sci', 'Sed0006245' => 'sed', 'Sed0007543' => 'sed', 'Sed0009411' => 'sed', 'Sed0010765' => 'sed', 'Sed0012944' => 'sed', 'Sed0014682' => 'sed', 'Sed0016174' => 'sed', 'Sed0016796' => 'sed', 'Sed0020317' => 'sed', 'Sed0021467' => 'sed', 'SEGI_01316' => 'sgi', 'SEGI_03374' => 'sgi', 'SEGI_16265' => 'sgi', 'SEGI_18569' => 'sgi', 'SEGI_20351' => 'sgi', 'SEGI_26395' => 'sgi', 'SEGI_29469' => 'sgi', 'SEGI_34771' => 'sgi', 'SEGI_36769' => 'sgi', 'SEGI_37139' => 'sgi', 'SGA_v2.0_scaffold100G29687' => 'sas', 'SGA_v2.0_scaffold118G32472' => 'sas', 'SGA_v2.0_scaffold14G07051' => 'sas', 'SGA_v2.0_scaffold183G39845' => 'sas', 'SGA_v2.0_scaffold1G00174' => 'sas', 'SGA_v2.0_scaffold22G09714' => 'sas', 'SGA_v2.0_scaffold333G48992' => 'sas', 'SGA_v2.0_scaffold46G17491' => 'sas', 'SGA_v2.0_scaffold49G18294' => 'sas', 'SGA_v2.0_scaffold63G21658' => 'sas', 'SHI01741' => 'shi', 'SHI05771' => 'shi', 'SHI18077' => 'shi', 'SHI20525' => 'shi', 'SHI20527' => 'shi', 'SHI20528' => 'shi', 'SMO172G0185' => 'smo', 'SMO198G0020' => 'smo', 'SMO351G0006' => 'smo', 'SMO356G0118' => 'smo', 'SMO358G0296' => 'smo', 'SMO367G0079' => 'smo', 'SMO367G1277' => 'smo', 'Solyc01g014220.3' => 'sly', 'Solyc01g111770.2' => 'sly', 'Solyc02g078180.3' => 'sly', 'Solyc03g006430.3' => 'sly', 'Solyc03g006456.1' => 'sly', 'Solyc03g079860.2' => 'sly', 'Solyc04g079770.3' => 'sly', 'Solyc05g007430.4' => 'sly', 'Solyc07g063150.3' => 'sly', 'Solyc08g016620.3' => 'sly', 'Solyc09g057590.3' => 'sly', 'Solyc09g057600.1' => 'sly', 'Solyc10g009050.3' => 'sly', 'Solyc11g017420.2' => 'sly', 'Sopen01g053810' => 'spe', 'Sopen02g023040' => 'spe', 'Sopen03g002440' => 'spe', 'Sopen04g033350' => 'spe', 'Sopen05g003310' => 'spe', 'Sopen07g004050' => 'spe', 'Sopen07g031340' => 'spe', 'Sopen08g006990' => 'spe', 'Sopen10g004830' => 'spe', 'Sopen11g009370' => 'spe', 'Sp1g24450' => 'spa', 'Sp1g29670' => 'spa', 'Sp1g39600' => 'spa', 'Sp2g11080' => 'spa', 'Sp2g13970' => 'spa', 'Sp4g16130' => 'spa', 'Sp6g13080' => 'spa', 'Sp7g37270' => 'spa', 'TAR371G0065' => 'tar', 'TAR376G0340' => 'tar', 'TAR376G0435' => 'tar', 'TAR381G0002' => 'tar', 'TAR381G1236' => 'tar', 'TAR624G0055' => 'tar', 'TAR624G0324' => 'tar', 'TAR624G0696' => 'tar', 'TAR624G0906' => 'tar', 'TAR625G0107' => 'tar', 'TAR626G0015' => 'tar', 'TAR626G1356' => 'tar', 'TAR627G0888' => 'tar', 'TAR628G0399' => 'tar', 'TAR628G1327' => 'tar', 'TAR629G2831' => 'tar', 'TAR629G2874' => 'tar', 'TAR633G1432' => 'tar', 'TAR633G2771' => 'tar', 'THA.LOC104803394' => 'tha', 'THA.LOC104805153' => 'tha', 'THA.LOC104806784' => 'tha', 'THA.LOC104810473' => 'tha', 'THA.LOC104813100' => 'tha', 'THA.LOC104814215' => 'tha', 'THA.LOC104815554' => 'tha', 'THA.LOC104820544' => 'tha', 'THA.LOC104824754' => 'tha', 'THA.LOC104827717' => 'tha', 'Thecc.02G031400' => 'tca', 'Thecc.02G055900' => 'tca', 'Thecc.02G350800' => 'tca', 'Thecc.06G150900' => 'tca', 'Thecc.06G186600' => 'tca', 'Thecc.07G089600' => 'tca', 'Thecc.08G020400' => 'tca', 'Thecc.08G182100' => 'tca', 'Thhalv10000873m.g' => 'esa', 'Thhalv10004185m.g' => 'esa', 'Thhalv10006981m.g' => 'esa', 'Thhalv10007204m.g' => 'esa', 'Thhalv10011374m.g' => 'esa', 'Thhalv10013482m.g' => 'esa', 'Thhalv10017801m.g' => 'esa', 'Thhalv10024983m.g' => 'esa', 'TPR.G12072' => 'tpr', 'TPR.G15769' => 'tpr', 'TPR.G16504' => 'tpr', 'TPR.G16506' => 'tpr', 'TPR.G24345' => 'tpr', 'TPR.G26666' => 'tpr', 'TPR.G27320' => 'tpr', 'TPR.G31819' => 'tpr', 'TPR.G38879' => 'tpr', 'TPR.G39015' => 'tpr', 'TPR.G8819' => 'tpr', 'TWI09G0924' => 'twi', 'TWI12G0811' => 'twi', 'TWI12G1294' => 'twi', 'TWI31G0150' => 'twi', 'TWI36G1262' => 'twi', 'TWI38G1287' => 'twi', 'TWI38G1633' => 'twi', 'TWI38G1982' => 'twi', 'TWI39G0116' => 'twi', 'TWI60G1011' => 'twi', 'TWI63G0171' => 'twi', 'TWI73G0839' => 'twi', 'TWI79G1511' => 'twi', 'unitig_0.g915' => 'ugi', 'unitig_0.g916' => 'ugi', 'unitig_21.g20219' => 'ugi', 'unitig_21.g20416' => 'ugi', 'unitig_578.g16132' => 'ugi', 'unitig_578.g16718' => 'ugi', 'unitig_62.g23481' => 'ugi', 'unitig_744.g24535' => 'ugi', 'unitig_749.g13525' => 'ugi', 'vmacro01248' => 'vma', 'vmacro02290' => 'vma', 'vmacro10946' => 'vma', 'vmacro11865' => 'vma', 'vmacro12493' => 'vma', 'vmacro17322' => 'vma', 'vmacro21599' => 'vma', 'vmacro23041' => 'vma', 'VMungo0251G0004' => 'vmu', 'VMungo0251G2639' => 'vmu', 'VMungo0251G2967' => 'vmu', 'VMungo0540G0864' => 'vmu', 'VMungo0540G1569' => 'vmu', 'VMungo0647G0317' => 'vmu', 'VMungo0720G1373' => 'vmu', 'VMungo0720G1508' => 'vmu', 'VMungo1080G0485' => 'vmu', 'VMungo1215G3177' => 'vmu', 'Zm00001eb112600' => 'zma', 'Zm00001eb120220' => 'zma', 'Zm00001eb153240' => 'zma', 'Zm00001eb168880' => 'zma', 'Zm00001eb213920' => 'zma', 'Zm00001eb228280' => 'zma', 'Zm00001eb254580' => 'zma', 'Zm00001eb272180' => 'zma', 'Zm00001eb293190' => 'zma', 'Zm00001eb322930' => 'zma', 'Zm00001eb353360' => 'zma', 'Zm00001eb353390' => 'zma', 'Zm00001eb353430' => 'zma', 'Zm00001eb353440' => 'zma', 'Zm00001eb353780' => 'zma' ), 'gf_id' => 'HOM05D000499', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000499' ), 'data_identifier' => 'HOM05D000499', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000499', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1066', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p29780' => 'bna', 'A02p33180' => 'bna', 'A03p16470' => 'bna', 'A03p66010' => 'bna', 'A04p25970' => 'bna', 'A06p01270' => 'bna', 'A06p46080' => 'bna', 'A07p11400' => 'bna', 'A08p01840' => 'bna', 'A08p08230' => 'bna', 'A08p25740' => 'bna', 'A09p32070' => 'bna', 'A09p37830' => 'bna', 'A09p42840' => 'bna', 'A09p42850' => 'bna', 'Aa31LG10G2060' => 'aar', 'Aa31LG2G7410' => 'aar', 'Aa31LG6G10200' => 'aar', 'Aa31LG6G16680' => 'aar', 'Aa31LG6G8470' => 'aar', 'Aa31LG9G12730' => 'aar', 'Aa31LG9G13680' => 'aar', 'Aa31LG9G14920' => 'aar', 'Aa31LG9G6650' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4977' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5467' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3254' => 'aag', 'Actinidia02578' => 'ach', 'Actinidia07693' => 'ach', 'Actinidia08413' => 'ach', 'Actinidia08414' => 'ach', 'Actinidia15289' => 'ach', 'Actinidia19871' => 'ach', 'Actinidia21475' => 'ach', 'Actinidia22576' => 'ach', 'Actinidia28327' => 'ach', 'Actinidia32491' => 'ach', 'Actinidia39463' => 'ach', 'Actinidia39571' => 'ach', 'Ah.01g013750' => 'amhyb', 'Ah.01g023210' => 'amhyb', 'Ah.04g164850' => 'amhyb', 'Ah.05g178060' => 'amhyb', 'Ah.07g204270' => 'amhyb', 'Ah.07g208480' => 'amhyb', 'Ah.09g237410' => 'amhyb', 'Ah.14g089460' => 'amhyb', 'AL1G41790' => 'aly', 'AL1G49050' => 'aly', 'AL1G53810' => 'aly', 'AL1G61400' => 'aly', 'AL4G18580' => 'aly', 'AL5G12510' => 'aly', 'AL5G12540' => 'aly', 'AL6G43230' => 'aly', 'AL7G10370' => 'aly', 'AL7G19250' => 'aly', 'AL8G12240' => 'aly', 'AL8G18540' => 'aly', 'Aqoxy1G02409' => 'aox', 'Aqoxy2G03993' => 'aox', 'Aqoxy3G03357' => 'aox', 'Aqoxy4G00785' => 'aox', 'Aqoxy5G02598' => 'aox', 'Aqoxy6G00132' => 'aox', 'Aqoxy7G01776' => 'aox', 'Aqoxy7G02316' => 'aox', 'Aqoxy7G03973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.12AFKW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B8730' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27IQR1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3F75VG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3RE0GA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41TCQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.527VTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FIR39' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5W8UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DA38EV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ63HS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H1I32C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HC27T5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4M8AP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7N3CZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9UVDZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LS1NQA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT1D4B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SKC4TM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCFV76' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF9Q1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQWD9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1ZM88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WE07RT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YCK7VH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJE6Q6' => 'arhy', 'AT1G28240' => 'ath', 'AT1G34550' => 'ath', 'AT1G53040' => 'ath', 'AT2G02910' => 'ath', 'AT4G09630' => 'ath', 'AT4G38500' => 'ath', 'AT5G42660' => 'ath', 'AT5G46220' => 'ath', 'ATR0152G026' => 'atr', 'ATR0564G343' => 'atr', 'ATR0706G151' => 'atr', 'ATR0733G207' => 'atr', 'ATR0751G234' => 'atr', 'ATR0807G048' => 'atr', 'ATR1091G084' => 'atr', 'Atru.chr10.1229' => 'acertr', 'Atru.chr10.1230' => 'acertr', 'Atru.chr10.1874' => 'acertr', 'Atru.chr11.1808' => 'acertr', 'Atru.chr13.1795' => 'acertr', 'Atru.chr13.570' => 'acertr', 'Atru.chr2.2608' => 'acertr', 'Atru.chr2.2609' => 'acertr', 'Atru.chr5.3428' => 'acertr', 'Atru.chr8.1171' => 'acertr', 'AUR62004651' => 'cqu', 'AUR62008675' => 'cqu', 'AUR62010014' => 'cqu', 'AUR62013004' => 'cqu', 'AUR62014825' => 'cqu', 'AUR62015015' => 'cqu', 'AUR62015151' => 'cqu', 'AUR62017020' => 'cqu', 'AUR62019422' => 'cqu', 'AUR62023570' => 'cqu', 'AUR62025571' => 'cqu', 'AUR62029098' => 'cqu', 'AUR62033863' => 'cqu', 'AUR62034296' => 'cqu', 'AUR62040075' => 'cqu', 'BcaB02g07334' => 'bca', 'BcaB02g10575' => 'bca', 'BcaB03g12119' => 'bca', 'BcaB03g12120' => 'bca', 'BcaB03g13945' => 'bca', 'BcaB04g17123' => 'bca', 'BcaB04g17867' => 'bca', 'BcaB04g19839' => 'bca', 'BcaB07g30317' => 'bca', 'BcaB07g32432' => 'bca', 'BcaB07g33362' => 'bca', 'BcaB08g36611' => 'bca', 'BcaC01g00028' => 'bca', 'BcaC01g01356' => 'bca', 'BcaC01g02034' => 'bca', 'BcaC01g06051' => 'bca', 'BcaC03g16839' => 'bca', 'BcaC03g17176' => 'bca', 'BcaC05g26829' => 'bca', 'BcaC06g31490' => 'bca', 'BcaC06g35344' => 'bca', 'BcaC06g36570' => 'bca', 'BcaC07g37537' => 'bca', 'BcaC08g43491' => 'bca', 'BcaC08g43773' => 'bca', 'BcaNung00234' => 'bca', 'BcaNung01982' => 'bca', 'BcaNung03707' => 'bca', 'BcaNung06454' => 'bca', 'BolC2t10762H' => 'bol', 'BolC2t11191H' => 'bol', 'BolC3t14322H' => 'bol', 'BolC3t19747H' => 'bol', 'BolC3t21425H' => 'bol', 'BolC4t27800H' => 'bol', 'BolC5t31423H' => 'bol', 'BolC6t35951H' => 'bol', 'BolC6t36282H' => 'bol', 'BolC7t40678H' => 'bol', 'BolC7t40679H' => 'bol', 'BolC7t42222H' => 'bol', 'BolC7t43492H' => 'bol', 'BolC7t46785H' => 'bol', 'BolC8t47853H' => 'bol', 'BolC9t56805H' => 'bol', 'BraA02t08000Z' => 'bra', 'BraA02t08341Z' => 'bra', 'BraA03t10936Z' => 'bra', 'BraA03t15657Z' => 'bra', 'BraA04t18100Z' => 'bra', 'BraA05t20523Z' => 'bra', 'BraA06t23353Z' => 'bra', 'BraA06t27473Z' => 'bra', 'BraA06t27769Z' => 'bra', 'BraA07t28928Z' => 'bra', 'BraA08t32236Z' => 'bra', 'BraA08t32841Z' => 'bra', 'BraA08t34524Z' => 'bra', 'BraA09t38742Z' => 'bra', 'BraA09t39295Z' => 'bra', 'C02p47180' => 'bna', 'C02p50990' => 'bna', 'C03p19360' => 'bna', 'C03p74950' => 'bna', 'C03p91000' => 'bna', 'C04p63260' => 'bna', 'C05p27050' => 'bna', 'C06p08750' => 'bna', 'C06p11490' => 'bna', 'C07p02820' => 'bna', 'C07p17180' => 'bna', 'C07p29440' => 'bna', 'C07p63730' => 'bna', 'C09p39260' => 'bna', 'CAN.G1164.34' => 'can', 'CAN.G1164.39' => 'can', 'CAN.G1530.3' => 'can', 'CAN.G162.61' => 'can', 'CAN.G176.6' => 'can', 'CAN.G289.49' => 'can', 'CAN.G370.21' => 'can', 'CAN.G370.22' => 'can', 'CAN.G371.117' => 'can', 'CAN.G58.37' => 'can', 'CAN.G588.98' => 'can', 'CANSAT21G2266' => 'cansat', 'CANSAT25G2799' => 'cansat', 'CANSAT35G0862' => 'cansat', 'CANSAT35G1704' => 'cansat', 'CANSAT35G1760' => 'cansat', 'CANSAT56G3971' => 'cansat', 'CANSAT56G4116' => 'cansat', 'CANSAT80G1259' => 'cansat', 'CARHR027730' => 'chi', 'CARHR033880' => 'chi', 'CARHR043270' => 'chi', 'CARHR145330' => 'chi', 'CARHR145340' => 'chi', 'CARHR175570' => 'chi', 'CARHR181570' => 'chi', 'CARHR258470' => 'chi', 'CARHR260490' => 'chi', 'CARHR294220' => 'chi', 'Carub.0001s2668' => 'cru', 'Carub.0001s3257' => 'cru', 'Carub.0001s4220' => 'cru', 'Carub.0005s0179' => 'cru', 'Carub.0006s2807' => 'cru', 'Carub.0007s0039' => 'cru', 'Carub.0008s0169' => 'cru', 'Carub.0008s0636' => 'cru', 'Ca_00338_v3' => 'car', 'Ca_00542_v3' => 'car', 'Ca_01844_v3' => 'car', 'Ca_10611_v3' => 'car', 'Ca_13326_v3' => 'car', 'Ca_17944_v3' => 'car', 'Ca_18546_v3' => 'car', 'Ca_24219_v3' => 'car', 'Ca_29972_v3' => 'car', 'CBR_g3681' => 'cbr', 'CBR_g40021' => 'cbr', 'Cc01_g08140' => 'ccan', 'Cc02_g13410' => 'ccan', 'Cc02_g37480' => 'ccan', 'Cc05_g12030' => 'ccan', 'Cc09_g03370' => 'ccan', 'Cc09_g10300' => 'ccan', 'Cc10_g03530' => 'ccan', 'Cc10_g11380' => 'ccan', 'CDE01G0176' => 'cde', 'CDE02G0675' => 'cde', 'CDE02G0942' => 'cde', 'CDE02G1153' => 'cde', 'CDE02G4177' => 'cde', 'CDE04G2117' => 'cde', 'CDE04G2736' => 'cde', 'CDE08G1161' => 'cde', 'CDE09G1238' => 'cde', 'Cfa000467' => 'cfa', 'Cfa000947' => 'cfa', 'Cfa004969' => 'cfa', 'Cfa005284' => 'cfa', 'Cfa008993' => 'cfa', 'Cfa018187' => 'cfa', 'Cfa018454' => 'cfa', 'Cfa020585' => 'cfa', 'Ciclev10000424m.g' => 'ccl', 'Ciclev10003605m.g' => 'ccl', 'Ciclev10007828m.g' => 'ccl', 'Ciclev10014620m.g' => 'ccl', 'Ciclev10015169m.g' => 'ccl', 'Ciclev10018291m.g' => 'ccl', 'Ciclev10028256m.g' => 'ccl', 'Ciclev10033822m.g' => 'ccl', 'CiPaw.05G060300' => 'cil', 'CiPaw.05G085000' => 'cil', 'CiPaw.06G083700' => 'cil', 'CiPaw.06G120300' => 'cil', 'CiPaw.09G060500' => 'cil', 'CiPaw.09G123800' => 'cil', 'CiPaw.11G169700' => 'cil', 'CiPaw.12G118300' => 'cil', 'CiPaw.15G071000' => 'cil', 'CiPaw.15G081900' => 'cil', 'ClCG01G024610' => 'cla', 'ClCG03G006070' => 'cla', 'ClCG05G019250' => 'cla', 'ClCG09G009500' => 'cla', 'ClCG11G008200' => 'cla', 'ClCG11G018080' => 'cla', 'COL.COLO4_17373' => 'col', 'COL.COLO4_22994' => 'col', 'COL.COLO4_26389' => 'col', 'COL.COLO4_27170' => 'col', 'COL.COLO4_31074' => 'col', 'COL.COLO4_31465' => 'col', 'COL.COLO4_36438' => 'col', 'COL.COLO4_36439' => 'col', 'Cpa.g.c38781' => 'cpa', 'Cpa.g.sc128.12' => 'cpa', 'Cpa.g.sc166.7' => 'cpa', 'Cpa.g.sc166.8' => 'cpa', 'Cpa.g.sc20.111' => 'cpa', 'Cpa.g.sc27.31' => 'cpa', 'Cpa.g.sc64.36' => 'cpa', 'Cpa.g.sc64.37' => 'cpa', 'Cpa.g.sc66.49' => 'cpa', 'Cpa.g.sc80.64' => 'cpa', 'CsaV3_1G012320' => 'csa', 'CsaV3_2G008480' => 'csa', 'CsaV3_2G033450' => 'csa', 'CsaV3_3G044830' => 'csa', 'CsaV3_4G033710' => 'csa', 'CsaV3_6G051730' => 'csa', 'CsaV3_7G025350' => 'csa', 'CSS0001067' => 'camsi', 'CSS0005996' => 'camsi', 'CSS0006590' => 'camsi', 'CSS0009673' => 'camsi', 'CSS0010201' => 'camsi', 'CSS0010549' => 'camsi', 'CSS0011364' => 'camsi', 'CSS0014473' => 'camsi', 'CSS0014961' => 'camsi', 'CSS0020191' => 'camsi', 'CSS0021165' => 'camsi', 'CSS0022306' => 'camsi', 'CSS0030591' => 'camsi', 'CSS0030696' => 'camsi', 'CSS0032653' => 'camsi', 'CSS0037487' => 'camsi', 'CSS0041102' => 'camsi', 'CSS0041261' => 'camsi', 'CSS0046246' => 'camsi', 'CSS0049256' => 'camsi', 'DCAR_004075' => 'dca', 'DCAR_011538' => 'dca', 'DCAR_019553' => 'dca', 'DCAR_020952' => 'dca', 'DCAR_021739' => 'dca', 'DCAR_027407' => 'dca', 'DCAR_027913' => 'dca', 'DCAR_028066' => 'dca', 'Dinv05899' => 'din', 'Dinv07563' => 'din', 'Dinv08010' => 'din', 'Dinv14125' => 'din', 'Dinv20172' => 'din', 'Dinv30743' => 'din', 'Dinv31229' => 'din', 'Dinv34162' => 'din', 'Dinv36028' => 'din', 'Dinv39368' => 'din', 'Dinv40565' => 'din', 'Dinv41706' => 'din', 'Duzib052G0089' => 'dzi', 'Duzib116G0641' => 'dzi', 'Duzib132G0069' => 'dzi', 'Duzib132G1219' => 'dzi', 'Duzib147G0278' => 'dzi', 'Duzib160G0480' => 'dzi', 'Duzib170G0661' => 'dzi', 'Duzib177G0591' => 'dzi', 'Duzib187G1353' => 'dzi', 'Duzib192G0858' => 'dzi', 'Duzib192G0883' => 'dzi', 'Duzib213G0506' => 'dzi', 'Duzib235G0289' => 'dzi', 'Duzib251G0422' => 'dzi', 'ECA232G3898' => 'eca', 'ECA233G5950' => 'eca', 'ECA234G1699' => 'eca', 'ECA234G2421' => 'eca', 'ECA236G0426' => 'eca', 'ECA236G4331' => 'eca', 'ECA248G2573' => 'eca', 'EL10Ac1g00077' => 'bvu', 'EL10Ac1g01746' => 'bvu', 'EL10Ac2g03464' => 'bvu', 'EL10Ac4g08176' => 'bvu', 'EL10Ac7g17521' => 'bvu', 'EL10Ac8g20386' => 'bvu', 'EL10Ac9g21343' => 'bvu', 'EL10Ac9g22688' => 'bvu', 'Eucgr.B03434' => 'egr', 'Eucgr.D00618' => 'egr', 'Eucgr.E02395' => 'egr', 'Eucgr.F01129' => 'egr', 'Eucgr.F02622' => 'egr', 'Eucgr.F04207' => 'egr', 'FAN01G0570' => 'fan', 'FAN03G3351' => 'fan', 'FAN06G3702' => 'fan', 'FAN07G2149' => 'fan', 'FAN10G3758' => 'fan', 'FAN11G1170' => 'fan', 'FAN11G2050' => 'fan', 'FAN11G2724' => 'fan', 'FAN12G1700' => 'fan', 'FAN12G2028' => 'fan', 'FAN15G1160' => 'fan', 'FAN15G3063' => 'fan', 'FAN16G2540' => 'fan', 'FAN16G3077' => 'fan', 'FAN16G3624' => 'fan', 'FAN17G0221' => 'fan', 'FAN20G2492' => 'fan', 'FAN20G2905' => 'fan', 'FAN21G0548' => 'fan', 'FAN21G1300' => 'fan', 'FAN22G0077' => 'fan', 'FAN22G1315' => 'fan', 'FAN24G1280' => 'fan', 'FAN24G1445' => 'fan', 'FAN24G3527' => 'fan', 'FAN25G0464' => 'fan', 'FAN25G2885' => 'fan', 'FAN25G3270' => 'fan', 'FAN27G1101' => 'fan', 'FAN27G2846' => 'fan', 'FAN27G3524' => 'fan', 'FvH4_2g11770' => 'fve', 'FvH4_2g15630' => 'fve', 'FvH4_3g05570' => 'fve', 'FvH4_3g09110' => 'fve', 'FvH4_3g19940' => 'fve', 'FvH4_4g04821' => 'fve', 'FvH4_4g31480' => 'fve', 'FvH4_7g01740' => 'fve', 'Glyma.05G130400' => 'gma', 'Glyma.05G156400' => 'gma', 'Glyma.07G197000' => 'gma', 'Glyma.08G085151' => 'gma', 'Glyma.08G114500' => 'gma', 'Glyma.08G300400' => 'gma', 'Glyma.10G215800' => 'gma', 'Glyma.12G224400' => 'gma', 'Glyma.13G179300' => 'gma', 'Glyma.13G218151' => 'gma', 'Glyma.13G238800' => 'gma', 'Glyma.13G276900' => 'gma', 'Glyma.14G078200' => 'gma', 'Glyma.15G074500' => 'gma', 'Glyma.15G094100' => 'gma', 'Glyma.17G247200' => 'gma', 'Glyma.18G120100' => 'gma', 'Glyma.20G176000' => 'gma', 'Gohir.A01G063600' => 'ghi', 'Gohir.A01G170301' => 'ghi', 'Gohir.A02G060500' => 'ghi', 'Gohir.A05G133850' => 'ghi', 'Gohir.A05G161400' => 'ghi', 'Gohir.A06G012900' => 'ghi', 'Gohir.A06G035901' => 'ghi', 'Gohir.A06G127100' => 'ghi', 'Gohir.A06G210500' => 'ghi', 'Gohir.A08G008650' => 'ghi', 'Gohir.A09G072700' => 'ghi', 'Gohir.A09G088301' => 'ghi', 'Gohir.A10G040600' => 'ghi', 'Gohir.A12G036300' => 'ghi', 'Gohir.A12G143350' => 'ghi', 'Gohir.A12G165500' => 'ghi', 'Gohir.A13G145700' => 'ghi', 'Gohir.D01G050000' => 'ghi', 'Gohir.D01G051366' => 'ghi', 'Gohir.D01G161350' => 'ghi', 'Gohir.D02G065900' => 'ghi', 'Gohir.D05G164200' => 'ghi', 'Gohir.D05G355500' => 'ghi', 'Gohir.D06G010400' => 'ghi', 'Gohir.D06G111250' => 'ghi', 'Gohir.D06G132000' => 'ghi', 'Gohir.D06G210500' => 'ghi', 'Gohir.D07G165675' => 'ghi', 'Gohir.D08G062240' => 'ghi', 'Gohir.D08G086101' => 'ghi', 'Gohir.D08G138060' => 'ghi', 'Gohir.D09G072300' => 'ghi', 'Gohir.D10G041400' => 'ghi', 'Gohir.D11G191020' => 'ghi', 'Gohir.D11G212066' => 'ghi', 'Gohir.D12G036300' => 'ghi', 'Gohir.D12G168600' => 'ghi', 'Gohir.D13G150600' => 'ghi', 'Gorai.001G057300' => 'gra', 'Gorai.002G069900' => 'gra', 'Gorai.002G200000' => 'gra', 'Gorai.003G067600' => 'gra', 'Gorai.005G074800' => 'gra', 'Gorai.006G087300' => 'gra', 'Gorai.008G037500' => 'gra', 'Gorai.008G181400' => 'gra', 'Gorai.009G169400' => 'gra', 'Gorai.009G387900' => 'gra', 'Gorai.010G013300' => 'gra', 'Gorai.010G153800' => 'gra', 'Gorai.010G255800' => 'gra', 'Gorai.011G043700' => 'gra', 'Gorai.011G198900' => 'gra', 'Gorai.013G168400' => 'gra', 'GSVIVG01005212001' => 'vvi', 'GSVIVG01006163001' => 'vvi', 'GSVIVG01009625001' => 'vvi', 'GSVIVG01014338001' => 'vvi', 'GSVIVG01020005001' => 'vvi', 'GSVIVG01021450001' => 'vvi', 'GSVIVG01023975001' => 'vvi', 'GSVIVG01034490001' => 'vvi', 'HanXRQChr04g0112071' => 'han', 'HanXRQChr05g0131151' => 'han', 'HanXRQChr09g0262371' => 'han', 'HanXRQChr09g0268401' => 'han', 'HanXRQChr10g0279241' => 'han', 'HanXRQChr10g0297961' => 'han', 'HanXRQChr11g0326231' => 'han', 'HanXRQChr11g0328471' => 'han', 'HanXRQChr16g0507941' => 'han', 'HanXRQChr17g0560211' => 'han', 'Haze_02108' => 'cav', 'Haze_02428' => 'cav', 'Haze_05593' => 'cav', 'Haze_06448' => 'cav', 'Haze_09427' => 'cav', 'Haze_12022' => 'cav', 'Haze_17612' => 'cav', 'Haze_17928' => 'cav', 'Hma1.2p1_0032F.1_g019250' => 'hma', 'Hma1.2p1_0163F.1_g072690' => 'hma', 'Hma1.2p1_0265F.1_g106710' => 'hma', 'Hma1.2p1_0286F.1_g113970' => 'hma', 'Hma1.2p1_0363F.1_g136640' => 'hma', 'Hma1.2p1_0584F.1_g183470' => 'hma', 'Hma1.2p1_0885F.1_g232570' => 'hma', 'HPP92_006022' => 'vpl', 'HPP92_007320' => 'vpl', 'HPP92_011521' => 'vpl', 'HPP92_019387' => 'vpl', 'HPP92_024038' => 'vpl', 'Hund05891' => 'sun', 'Hund06450' => 'sun', 'Hund12053' => 'sun', 'Hund16800' => 'sun', 'Hund21222' => 'sun', 'Hund22896' => 'sun', 'Hund23746' => 'sun', 'Hund27083' => 'sun', 'Lalb_Chr02g0141831' => 'lal', 'Lalb_Chr02g0141841' => 'lal', 'Lalb_Chr05g0220411' => 'lal', 'Lalb_Chr06g0162081' => 'lal', 'Lalb_Chr09g0327651' => 'lal', 'Lalb_Chr13g0295051' => 'lal', 'Lalb_Chr15g0086801' => 'lal', 'Lalb_Chr16g0383781' => 'lal', 'Lalb_Chr16g0383791' => 'lal', 'Lalb_Chr18g0055441' => 'lal', 'Lalb_Chr18g0059611' => 'lal', 'Lalb_Chr20g0109661' => 'lal', 'Lalb_Chr20g0109831' => 'lal', 'Lalb_Chr20g0121871' => 'lal', 'Lalb_Chr22g0355361' => 'lal', 'Lalb_Chr25g0286371' => 'lal', 'Lj1A1187G43' => 'lonja', 'Lj1A1205T50' => 'lonja', 'Lj1A800G33' => 'lonja', 'Lj1C1187T7' => 'lonja', 'Lj1C843T11' => 'lonja', 'Lj1g0010940' => 'lja', 'Lj2A288T69' => 'lonja', 'Lj3g0024276' => 'lja', 'Lj4A47T76' => 'lonja', 'Lj4g0005805' => 'lja', 'Lj4g0006097' => 'lja', 'Lj4g0008528' => 'lja', 'Lj4g0024907' => 'lja', 'Lj5g0012472' => 'lja', 'Lj5g0018648' => 'lja', 'Lj6C789G1' => 'lonja', 'Lj6g0004000' => 'lja', 'Lj7A292G67' => 'lonja', 'Lj7A292T64' => 'lonja', 'Lj9A400T58' => 'lonja', 'Lsat_1_v5_gn_1_126181' => 'lsa', 'Lsat_1_v5_gn_4_123041' => 'lsa', 'Lsat_1_v5_gn_4_133620' => 'lsa', 'Lsat_1_v5_gn_4_53221' => 'lsa', 'Lsat_1_v5_gn_4_71961' => 'lsa', 'Lsat_1_v5_gn_7_105241' => 'lsa', 'Lsat_1_v5_gn_7_21361' => 'lsa', 'Lsat_1_v5_gn_7_28860' => 'lsa', 'Lsat_1_v5_gn_7_31260' => 'lsa', 'Lsat_1_v5_gn_8_52801' => 'lsa', 'Manes.02G191400' => 'mes', 'Manes.03G110100' => 'mes', 'Manes.04G071100' => 'mes', 'Manes.05G100500' => 'mes', 'Manes.05G164700' => 'mes', 'Manes.15G087000' => 'mes', 'Manes.15G121500' => 'mes', 'Manes.16G028300' => 'mes', 'Manes.17G046100' => 'mes', 'Manes.17G069800' => 'mes', 'Manes.18G100500' => 'mes', 'Mapoly0002s0109' => 'mpo', 'Mapoly0024s0007' => 'mpo', 'Mapoly0089s0032' => 'mpo', 'MBI04_g42241_MAGBIO' => 'mbi', 'MBI05_g11988_MAGBIO' => 'mbi', 'MBI05_g35452_MAGBIO' => 'mbi', 'MBI07_g30179_MAGBIO' => 'mbi', 'MBI07_g35859_MAGBIO' => 'mbi', 'MBI07_g35860_MAGBIO' => 'mbi', 'MBI07_g37166_MAGBIO' => 'mbi', 'MBI08_g18172_MAGBIO' => 'mbi', 'MBI09_g08441_MAGBIO' => 'mbi', 'MBI13_g01676_MAGBIO' => 'mbi', 'MBI14_g42955_MAGBIO' => 'mbi', 'MBI16_g13161_MAGBIO' => 'mbi', 'MBI17_g27204_MAGBIO' => 'mbi', 'MBI19_g21595_MAGBIO' => 'mbi', 'MD00G1148400' => 'mdo', 'MD02G1301200' => 'mdo', 'MD03G1227800' => 'mdo', 'MD05G1041100' => 'mdo', 'MD05G1124800' => 'mdo', 'MD05G1284000' => 'mdo', 'MD05G1338800' => 'mdo', 'MD05G1338900' => 'mdo', 'MD07G1022800' => 'mdo', 'MD10G1047500' => 'mdo', 'MD10G1127500' => 'mdo', 'MD10G1262300' => 'mdo', 'MD10G1293800' => 'mdo', 'MD16G1074300' => 'mdo', 'Medtr1g021670' => 'mtr', 'Medtr1g096320' => 'mtr', 'Medtr2g013690' => 'mtr', 'Medtr2g019450' => 'mtr', 'Medtr2g085170' => 'mtr', 'Medtr4g088785' => 'mtr', 'Medtr8g055930' => 'mtr', 'Medtr8g085850' => 'mtr', 'MELO3C002605.2' => 'cme', 'MELO3C003891.2' => 'cme', 'MELO3C004012.2' => 'cme', 'MELO3C007134.2' => 'cme', 'MELO3C008118.2' => 'cme', 'MELO3C016700.2' => 'cme', 'MELO3C024127.2' => 'cme', 'MELO3C033361.2' => 'cme', 'MELO3C033362.2' => 'cme', 'Migut.C00430' => 'egut', 'Migut.C01246' => 'egut', 'Migut.E00101' => 'egut', 'Migut.H01486' => 'egut', 'Migut.H01939' => 'egut', 'Migut.K00360' => 'egut', 'Migut.M00910' => 'egut', 'Migut.M01139' => 'egut', 'Migut.N02677' => 'egut', 'MSTRG.13252' => 'ama', 'MSTRG.14701' => 'ama', 'MSTRG.1521' => 'ama', 'MSTRG.15884' => 'ama', 'MSTRG.16242' => 'ama', 'MSTRG.22285' => 'ama', 'MSTRG.22444' => 'ama', 'MSTRG.2349' => 'ama', 'MSTRG.26308' => 'ama', 'MSTRG.28296' => 'ama', 'MSTRG.9895' => 'ama', 'Nitab4.5_0000110g0060' => 'nta', 'Nitab4.5_0000420g0130' => 'nta', 'Nitab4.5_0000422g0030' => 'nta', 'Nitab4.5_0000560g0180' => 'nta', 'Nitab4.5_0000703g0100' => 'nta', 'Nitab4.5_0000786g0200' => 'nta', 'Nitab4.5_0001336g0020' => 'nta', 'Nitab4.5_0001796g0030' => 'nta', 'Nitab4.5_0003348g0060' => 'nta', 'Nitab4.5_0003698g0040' => 'nta', 'Nitab4.5_0003942g0090' => 'nta', 'Nitab4.5_0004775g0070' => 'nta', 'Nitab4.5_0004864g0030' => 'nta', 'Nitab4.5_0005615g0020' => 'nta', 'Nitab4.5_0009288g0030' => 'nta', 'Nitab4.5_0009341g0010' => 'nta', 'Nitab4.5_0009535g0010' => 'nta', 'Nn1g03995' => 'nnu', 'Nn1g04100' => 'nnu', 'Nn1g06530' => 'nnu', 'Nn3g16404' => 'nnu', 'Nn3g17212' => 'nnu', 'Nn3g20776' => 'nnu', 'Nn3g21923' => 'nnu', 'Nn5g27737' => 'nnu', 'Nn5g29461' => 'nnu', 'Nn7g38355' => 'nnu', 'Nn8g39873' => 'nnu', 'Oeu000548.2' => 'oeu', 'Oeu004672.1' => 'oeu', 'Oeu015605.2' => 'oeu', 'Oeu016092.1' => 'oeu', 'Oeu017879.3' => 'oeu', 'Oeu024910.1' => 'oeu', 'Oeu028965.1' => 'oeu', 'Oeu031269.1' => 'oeu', 'Oeu031270.1' => 'oeu', 'Oeu032535.1' => 'oeu', 'Oeu034151.1' => 'oeu', 'Oeu034152.1' => 'oeu', 'Oeu034588.2' => 'oeu', 'Oeu050846.1' => 'oeu', 'Oeu050849.2' => 'oeu', 'Oeu051063.2' => 'oeu', 'Oeu052368.1' => 'oeu', 'Oeu052370.1' => 'oeu', 'Os01g0210400' => 'osa', 'Os01g0304300' => 'osa', 'Os01g0749100' => 'osa', 'Os02g0745800' => 'osa', 'Os03g0769050' => 'osa', 'Os05g0531500' => 'osa', 'Os06g0724300' => 'osa', 'Os11g0198100' => 'osa', 'Peaxi162Scf00069g01425' => 'pax', 'Peaxi162Scf00280g00811' => 'pax', 'Peaxi162Scf00310g00615' => 'pax', 'Peaxi162Scf00362g00542' => 'pax', 'Peaxi162Scf00461g00310' => 'pax', 'Peaxi162Scf00530g00118' => 'pax', 'Peaxi162Scf00541g00057' => 'pax', 'Peaxi162Scf00661g00017' => 'pax', 'Peaxi162Scf00926g00027' => 'pax', 'Peaxi162Scf01064g00263' => 'pax', 'Peaxi162Scf01211g00135' => 'pax', 'PGR004G2336' => 'pgr', 'PGR042G0327' => 'pgr', 'PGR042G1957' => 'pgr', 'PGR042G2003' => 'pgr', 'PGR042G3929' => 'pgr', 'PGR083G1137' => 'pgr', 'PGR083G1364' => 'pgr', 'PGSC0003DMG400003381' => 'stu', 'PGSC0003DMG400003417' => 'stu', 'PGSC0003DMG400008981' => 'stu', 'PGSC0003DMG400012417' => 'stu', 'PGSC0003DMG400012823' => 'stu', 'PGSC0003DMG400016885' => 'stu', 'PGSC0003DMG400022812' => 'stu', 'PGSC0003DMG400029726' => 'stu', 'PGSC0003DMG401009243' => 'stu', 'PGSC0003DMG401031505' => 'stu', 'PGSC0003DMG402031505' => 'stu', 'Phvul.001G017600' => 'pvu', 'Phvul.002G193500' => 'pvu', 'Phvul.002G228900' => 'pvu', 'Phvul.002G236800' => 'pvu', 'Phvul.003G049500' => 'pvu', 'Phvul.005G072000' => 'pvu', 'Phvul.006G164800' => 'pvu', 'Phvul.006G185100' => 'pvu', 'Phvul.007G090000' => 'pvu', 'Potri.001G399800' => 'ptr', 'Potri.002G149900' => 'ptr', 'Potri.004G044100' => 'ptr', 'Potri.004G177600' => 'ptr', 'Potri.009G138000' => 'ptr', 'Potri.010G094000' => 'ptr', 'Potri.011G053000' => 'ptr', 'Potri.011G119300' => 'ptr', 'Potri.013G113700' => 'ptr', 'Potri.018G107800' => 'ptr', 'Potri.019G084100' => 'ptr', 'Pp3c14_23720' => 'ppa', 'Pp3c16_6340' => 'ppa', 'Pp3c23_13420' => 'ppa', 'Pp3c24_2740' => 'ppa', 'Pp3c25_860' => 'ppa', 'Pp3c8_21750' => 'ppa', 'Prupe.1G273000' => 'ppe', 'Prupe.1G273700' => 'ppe', 'Prupe.1G274100' => 'ppe', 'Prupe.2G023300' => 'ppe', 'Prupe.4G048000' => 'ppe', 'Prupe.4G080400' => 'ppe', 'Prupe.4G181200' => 'ppe', 'Prupe.8G056900' => 'ppe', 'Prupe.8G168700' => 'ppe', 'Psat1g189080' => 'psa', 'Psat1g204760' => 'psa', 'Psat4g175560' => 'psa', 'Psat4g177720' => 'psa', 'Psat5g244240' => 'psa', 'Psat6g010720' => 'psa', 'Psat6g187200' => 'psa', 'Psat7g072040' => 'psa', 'PSO017G3501' => 'pso', 'PSO063G2148' => 'pso', 'PSO063G5608' => 'pso', 'PSO210G6392' => 'pso', 'PSO541G2319' => 'pso', 'PSO541G2836' => 'pso', 'PSO541G4012' => 'pso', 'PSO541G6253' => 'pso', 'PSO675G0580' => 'pso', 'PSO675G0856' => 'pso', 'PSO675G5635' => 'pso', 'PSO675G9157' => 'pso', 'PSO832G1660' => 'pso', 'PSO832G1969' => 'pso', 'QL02p007186' => 'qlo', 'QL02p033904' => 'qlo', 'QL03p064391' => 'qlo', 'QL05p040593' => 'qlo', 'QL05p058242' => 'qlo', 'QL08p021825' => 'qlo', 'QL11p004981' => 'qlo', 'RcHm_v2.0_Chr1g0318301' => 'rch', 'RcHm_v2.0_Chr4g0418501' => 'rch', 'RcHm_v2.0_Chr4g0439971' => 'rch', 'RcHm_v2.0_Chr5g0008541' => 'rch', 'RcHm_v2.0_Chr5g0014101' => 'rch', 'RcHm_v2.0_Chr5g0014131' => 'rch', 'RcHm_v2.0_Chr5g0033621' => 'rch', 'RcHm_v2.0_Chr6g0272041' => 'rch', 'RcHm_v2.0_Chr6g0278831' => 'rch', 'Rhsim02G0130400' => 'rsi', 'Rhsim02G0171100' => 'rsi', 'Rhsim05G0053000' => 'rsi', 'Rhsim05G0053100' => 'rsi', 'Rhsim06G0096500' => 'rsi', 'Rhsim06G0096600' => 'rsi', 'Rhsim06G0199100' => 'rsi', 'Rhsim12G0062300' => 'rsi', 'Rhsim12G0062800' => 'rsi', 'Sabra02G0118600' => 'sbr', 'Sabra04G0027300' => 'sbr', 'Sabra04G0119500' => 'sbr', 'Sabra08G0112500' => 'sbr', 'Sabra11G0036800' => 'sbr', 'Sabra11G0103800' => 'sbr', 'Sabra13G0096300' => 'sbr', 'Sabra16G0262300' => 'sbr', 'Sabra18G0091700' => 'sbr', 'Sabra19G0095400' => 'sbr', 'SalBow6G3080' => 'sbo', 'SalBow7G1157' => 'sbo', 'SalBow7G2123' => 'sbo', 'SalBow7G2285' => 'sbo', 'SalBow7G3537' => 'sbo', 'SalBow8G2947' => 'sbo', 'SalBow8G4463' => 'sbo', 'SalBow8G5466' => 'sbo', 'Sc01g0001750' => 'sci', 'Sc02g0006640' => 'sci', 'Sc02g0006670' => 'sci', 'Sc04g0008220' => 'sci', 'Sc05g0006190' => 'sci', 'Sc08g0002760' => 'sci', 'Sc17g0006170' => 'sci', 'Sc22g0002050' => 'sci', 'Sc23g0001190' => 'sci', 'Sc24g0000980' => 'sci', 'Sed0006245' => 'sed', 'Sed0007543' => 'sed', 'Sed0009411' => 'sed', 'Sed0010765' => 'sed', 'Sed0012944' => 'sed', 'Sed0014682' => 'sed', 'Sed0016174' => 'sed', 'Sed0016796' => 'sed', 'Sed0020317' => 'sed', 'Sed0021467' => 'sed', 'SEGI_01316' => 'sgi', 'SEGI_03374' => 'sgi', 'SEGI_16265' => 'sgi', 'SEGI_18569' => 'sgi', 'SEGI_20351' => 'sgi', 'SEGI_26395' => 'sgi', 'SEGI_29469' => 'sgi', 'SEGI_34771' => 'sgi', 'SEGI_36769' => 'sgi', 'SEGI_37139' => 'sgi', 'SGA_v2.0_scaffold100G29687' => 'sas', 'SGA_v2.0_scaffold118G32472' => 'sas', 'SGA_v2.0_scaffold14G07051' => 'sas', 'SGA_v2.0_scaffold183G39845' => 'sas', 'SGA_v2.0_scaffold1G00174' => 'sas', 'SGA_v2.0_scaffold22G09714' => 'sas', 'SGA_v2.0_scaffold333G48992' => 'sas', 'SGA_v2.0_scaffold46G17491' => 'sas', 'SGA_v2.0_scaffold49G18294' => 'sas', 'SGA_v2.0_scaffold63G21658' => 'sas', 'SHI01741' => 'shi', 'SHI05771' => 'shi', 'SHI18077' => 'shi', 'SHI20525' => 'shi', 'SHI20527' => 'shi', 'SHI20528' => 'shi', 'SMO172G0185' => 'smo', 'SMO198G0020' => 'smo', 'SMO351G0006' => 'smo', 'SMO356G0118' => 'smo', 'SMO358G0296' => 'smo', 'SMO367G0079' => 'smo', 'SMO367G1277' => 'smo', 'Solyc01g014220.3' => 'sly', 'Solyc01g111770.2' => 'sly', 'Solyc02g078180.3' => 'sly', 'Solyc03g006430.3' => 'sly', 'Solyc03g006456.1' => 'sly', 'Solyc03g079860.2' => 'sly', 'Solyc04g079770.3' => 'sly', 'Solyc05g007430.4' => 'sly', 'Solyc07g063150.3' => 'sly', 'Solyc08g016620.3' => 'sly', 'Solyc09g057590.3' => 'sly', 'Solyc09g057600.1' => 'sly', 'Solyc10g009050.3' => 'sly', 'Solyc11g017420.2' => 'sly', 'Sopen01g053810' => 'spe', 'Sopen02g023040' => 'spe', 'Sopen03g002440' => 'spe', 'Sopen04g033350' => 'spe', 'Sopen05g003310' => 'spe', 'Sopen07g004050' => 'spe', 'Sopen07g031340' => 'spe', 'Sopen08g006990' => 'spe', 'Sopen10g004830' => 'spe', 'Sopen11g009370' => 'spe', 'Sp1g24450' => 'spa', 'Sp1g29670' => 'spa', 'Sp1g39600' => 'spa', 'Sp2g11080' => 'spa', 'Sp2g13970' => 'spa', 'Sp4g16130' => 'spa', 'Sp6g13080' => 'spa', 'Sp7g37270' => 'spa', 'TAR371G0065' => 'tar', 'TAR376G0340' => 'tar', 'TAR376G0435' => 'tar', 'TAR381G0002' => 'tar', 'TAR381G1236' => 'tar', 'TAR624G0055' => 'tar', 'TAR624G0324' => 'tar', 'TAR624G0696' => 'tar', 'TAR624G0906' => 'tar', 'TAR625G0107' => 'tar', 'TAR626G0015' => 'tar', 'TAR626G1356' => 'tar', 'TAR627G0888' => 'tar', 'TAR628G0399' => 'tar', 'TAR628G1327' => 'tar', 'TAR629G2831' => 'tar', 'TAR629G2874' => 'tar', 'TAR633G1432' => 'tar', 'TAR633G2771' => 'tar', 'THA.LOC104803394' => 'tha', 'THA.LOC104805153' => 'tha', 'THA.LOC104806784' => 'tha', 'THA.LOC104810473' => 'tha', 'THA.LOC104813100' => 'tha', 'THA.LOC104814215' => 'tha', 'THA.LOC104815554' => 'tha', 'THA.LOC104820544' => 'tha', 'THA.LOC104824754' => 'tha', 'THA.LOC104827717' => 'tha', 'Thecc.02G031400' => 'tca', 'Thecc.02G055900' => 'tca', 'Thecc.02G350800' => 'tca', 'Thecc.06G150900' => 'tca', 'Thecc.06G186600' => 'tca', 'Thecc.07G089600' => 'tca', 'Thecc.08G020400' => 'tca', 'Thecc.08G182100' => 'tca', 'Thhalv10000873m.g' => 'esa', 'Thhalv10004185m.g' => 'esa', 'Thhalv10006981m.g' => 'esa', 'Thhalv10007204m.g' => 'esa', 'Thhalv10011374m.g' => 'esa', 'Thhalv10013482m.g' => 'esa', 'Thhalv10017801m.g' => 'esa', 'Thhalv10024983m.g' => 'esa', 'TPR.G12072' => 'tpr', 'TPR.G15769' => 'tpr', 'TPR.G16504' => 'tpr', 'TPR.G16506' => 'tpr', 'TPR.G24345' => 'tpr', 'TPR.G26666' => 'tpr', 'TPR.G27320' => 'tpr', 'TPR.G31819' => 'tpr', 'TPR.G38879' => 'tpr', 'TPR.G39015' => 'tpr', 'TPR.G8819' => 'tpr', 'TWI09G0924' => 'twi', 'TWI12G0811' => 'twi', 'TWI12G1294' => 'twi', 'TWI31G0150' => 'twi', 'TWI36G1262' => 'twi', 'TWI38G1287' => 'twi', 'TWI38G1633' => 'twi', 'TWI38G1982' => 'twi', 'TWI39G0116' => 'twi', 'TWI60G1011' => 'twi', 'TWI63G0171' => 'twi', 'TWI73G0839' => 'twi', 'TWI79G1511' => 'twi', 'unitig_0.g915' => 'ugi', 'unitig_0.g916' => 'ugi', 'unitig_21.g20219' => 'ugi', 'unitig_21.g20416' => 'ugi', 'unitig_578.g16132' => 'ugi', 'unitig_578.g16718' => 'ugi', 'unitig_62.g23481' => 'ugi', 'unitig_744.g24535' => 'ugi', 'unitig_749.g13525' => 'ugi', 'vmacro01248' => 'vma', 'vmacro02290' => 'vma', 'vmacro10946' => 'vma', 'vmacro11865' => 'vma', 'vmacro12493' => 'vma', 'vmacro17322' => 'vma', 'vmacro21599' => 'vma', 'vmacro23041' => 'vma', 'VMungo0251G0004' => 'vmu', 'VMungo0251G2639' => 'vmu', 'VMungo0251G2967' => 'vmu', 'VMungo0540G0864' => 'vmu', 'VMungo0540G1569' => 'vmu', 'VMungo0647G0317' => 'vmu', 'VMungo0720G1373' => 'vmu', 'VMungo0720G1508' => 'vmu', 'VMungo1080G0485' => 'vmu', 'VMungo1215G3177' => 'vmu', 'Zm00001eb112600' => 'zma', 'Zm00001eb120220' => 'zma', 'Zm00001eb153240' => 'zma', 'Zm00001eb168880' => 'zma', 'Zm00001eb213920' => 'zma', 'Zm00001eb228280' => 'zma', 'Zm00001eb254580' => 'zma', 'Zm00001eb272180' => 'zma', 'Zm00001eb293190' => 'zma', 'Zm00001eb322930' => 'zma', 'Zm00001eb353360' => 'zma', 'Zm00001eb353390' => 'zma', 'Zm00001eb353430' => 'zma', 'Zm00001eb353440' => 'zma', 'Zm00001eb353780' => 'zma' ) $gf_id = 'HOM05D000499' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000499' ) $data_identifier = 'HOM05D000499' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 29, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 12, 'amhyb' => (int) 8, 'aly' => (int) 12, 'aox' => (int) 9, 'arhy' => (int) 26, 'ath' => (int) 8, 'atr' => (int) 7, 'acertr' => (int) 10, 'cqu' => (int) 15, 'bca' => (int) 29, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 11, 'cansat' => (int) 8, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 9, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 8, 'cpa' => (int) 10, 'csa' => (int) 7, 'camsi' => (int) 20, 'dca' => (int) 8, 'din' => (int) 12, 'dzi' => (int) 14, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 6, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 38, 'gra' => (int) 16, 'vvi' => (int) 8, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 5, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 11, 'lja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 11, 'mpo' => (int) 3, 'mbi' => (int) 14, 'mdo' => (int) 14, 'mtr' => (int) 8, 'cme' => (int) 9, 'egut' => (int) 9, 'ama' => (int) 11, 'nta' => (int) 17, 'nnu' => (int) 11, 'oeu' => (int) 18, 'osa' => (int) 8, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 6, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 9, 'rsi' => (int) 9, 'sbr' => (int) 10, 'sbo' => (int) 8, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 10, 'sas' => (int) 10, 'shi' => (int) 6, 'smo' => (int) 7, 'sly' => (int) 14, 'spe' => (int) 10, 'spa' => (int) 8, 'tar' => (int) 19, 'tha' => (int) 10, 'tca' => (int) 8, 'esa' => (int) 8, 'tpr' => (int) 11, 'twi' => (int) 13, 'ugi' => (int) 9, 'vma' => (int) 8, 'vmu' => (int) 10, 'zma' => (int) 15 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb353780' $species_info = array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ) $local_species = 'cil' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000499', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1066', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p29780' => 'bna', 'A02p33180' => 'bna', 'A03p16470' => 'bna', 'A03p66010' => 'bna', 'A04p25970' => 'bna', 'A06p01270' => 'bna', 'A06p46080' => 'bna', 'A07p11400' => 'bna', 'A08p01840' => 'bna', 'A08p08230' => 'bna', 'A08p25740' => 'bna', 'A09p32070' => 'bna', 'A09p37830' => 'bna', 'A09p42840' => 'bna', 'A09p42850' => 'bna', 'Aa31LG10G2060' => 'aar', 'Aa31LG2G7410' => 'aar', 'Aa31LG6G10200' => 'aar', 'Aa31LG6G16680' => 'aar', 'Aa31LG6G8470' => 'aar', 'Aa31LG9G12730' => 'aar', 'Aa31LG9G13680' => 'aar', 'Aa31LG9G14920' => 'aar', 'Aa31LG9G6650' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4977' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5467' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3254' => 'aag', 'Actinidia02578' => 'ach', 'Actinidia07693' => 'ach', 'Actinidia08413' => 'ach', 'Actinidia08414' => 'ach', 'Actinidia15289' => 'ach', 'Actinidia19871' => 'ach', 'Actinidia21475' => 'ach', 'Actinidia22576' => 'ach', 'Actinidia28327' => 'ach', 'Actinidia32491' => 'ach', 'Actinidia39463' => 'ach', 'Actinidia39571' => 'ach', 'Ah.01g013750' => 'amhyb', 'Ah.01g023210' => 'amhyb', 'Ah.04g164850' => 'amhyb', 'Ah.05g178060' => 'amhyb', 'Ah.07g204270' => 'amhyb', 'Ah.07g208480' => 'amhyb', 'Ah.09g237410' => 'amhyb', 'Ah.14g089460' => 'amhyb', 'AL1G41790' => 'aly', 'AL1G49050' => 'aly', 'AL1G53810' => 'aly', 'AL1G61400' => 'aly', 'AL4G18580' => 'aly', 'AL5G12510' => 'aly', 'AL5G12540' => 'aly', 'AL6G43230' => 'aly', 'AL7G10370' => 'aly', 'AL7G19250' => 'aly', 'AL8G12240' => 'aly', 'AL8G18540' => 'aly', 'Aqoxy1G02409' => 'aox', 'Aqoxy2G03993' => 'aox', 'Aqoxy3G03357' => 'aox', 'Aqoxy4G00785' => 'aox', 'Aqoxy5G02598' => 'aox', 'Aqoxy6G00132' => 'aox', 'Aqoxy7G01776' => 'aox', 'Aqoxy7G02316' => 'aox', 'Aqoxy7G03973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.12AFKW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B8730' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27IQR1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3F75VG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3RE0GA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41TCQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.527VTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FIR39' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5W8UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DA38EV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ63HS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H1I32C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HC27T5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4M8AP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7N3CZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9UVDZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LS1NQA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT1D4B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SKC4TM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCFV76' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF9Q1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQWD9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1ZM88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WE07RT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YCK7VH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJE6Q6' => 'arhy', 'AT1G28240' => 'ath', 'AT1G34550' => 'ath', 'AT1G53040' => 'ath', 'AT2G02910' => 'ath', 'AT4G09630' => 'ath', 'AT4G38500' => 'ath', 'AT5G42660' => 'ath', 'AT5G46220' => 'ath', 'ATR0152G026' => 'atr', 'ATR0564G343' => 'atr', 'ATR0706G151' => 'atr', 'ATR0733G207' => 'atr', 'ATR0751G234' => 'atr', 'ATR0807G048' => 'atr', 'ATR1091G084' => 'atr', 'Atru.chr10.1229' => 'acertr', 'Atru.chr10.1230' => 'acertr', 'Atru.chr10.1874' => 'acertr', 'Atru.chr11.1808' => 'acertr', 'Atru.chr13.1795' => 'acertr', 'Atru.chr13.570' => 'acertr', 'Atru.chr2.2608' => 'acertr', 'Atru.chr2.2609' => 'acertr', 'Atru.chr5.3428' => 'acertr', 'Atru.chr8.1171' => 'acertr', 'AUR62004651' => 'cqu', 'AUR62008675' => 'cqu', 'AUR62010014' => 'cqu', 'AUR62013004' => 'cqu', 'AUR62014825' => 'cqu', 'AUR62015015' => 'cqu', 'AUR62015151' => 'cqu', 'AUR62017020' => 'cqu', 'AUR62019422' => 'cqu', 'AUR62023570' => 'cqu', 'AUR62025571' => 'cqu', 'AUR62029098' => 'cqu', 'AUR62033863' => 'cqu', 'AUR62034296' => 'cqu', 'AUR62040075' => 'cqu', 'BcaB02g07334' => 'bca', 'BcaB02g10575' => 'bca', 'BcaB03g12119' => 'bca', 'BcaB03g12120' => 'bca', 'BcaB03g13945' => 'bca', 'BcaB04g17123' => 'bca', 'BcaB04g17867' => 'bca', 'BcaB04g19839' => 'bca', 'BcaB07g30317' => 'bca', 'BcaB07g32432' => 'bca', 'BcaB07g33362' => 'bca', 'BcaB08g36611' => 'bca', 'BcaC01g00028' => 'bca', 'BcaC01g01356' => 'bca', 'BcaC01g02034' => 'bca', 'BcaC01g06051' => 'bca', 'BcaC03g16839' => 'bca', 'BcaC03g17176' => 'bca', 'BcaC05g26829' => 'bca', 'BcaC06g31490' => 'bca', 'BcaC06g35344' => 'bca', 'BcaC06g36570' => 'bca', 'BcaC07g37537' => 'bca', 'BcaC08g43491' => 'bca', 'BcaC08g43773' => 'bca', 'BcaNung00234' => 'bca', 'BcaNung01982' => 'bca', 'BcaNung03707' => 'bca', 'BcaNung06454' => 'bca', 'BolC2t10762H' => 'bol', 'BolC2t11191H' => 'bol', 'BolC3t14322H' => 'bol', 'BolC3t19747H' => 'bol', 'BolC3t21425H' => 'bol', 'BolC4t27800H' => 'bol', 'BolC5t31423H' => 'bol', 'BolC6t35951H' => 'bol', 'BolC6t36282H' => 'bol', 'BolC7t40678H' => 'bol', 'BolC7t40679H' => 'bol', 'BolC7t42222H' => 'bol', 'BolC7t43492H' => 'bol', 'BolC7t46785H' => 'bol', 'BolC8t47853H' => 'bol', 'BolC9t56805H' => 'bol', 'BraA02t08000Z' => 'bra', 'BraA02t08341Z' => 'bra', 'BraA03t10936Z' => 'bra', 'BraA03t15657Z' => 'bra', 'BraA04t18100Z' => 'bra', 'BraA05t20523Z' => 'bra', 'BraA06t23353Z' => 'bra', 'BraA06t27473Z' => 'bra', 'BraA06t27769Z' => 'bra', 'BraA07t28928Z' => 'bra', 'BraA08t32236Z' => 'bra', 'BraA08t32841Z' => 'bra', 'BraA08t34524Z' => 'bra', 'BraA09t38742Z' => 'bra', 'BraA09t39295Z' => 'bra', 'C02p47180' => 'bna', 'C02p50990' => 'bna', 'C03p19360' => 'bna', 'C03p74950' => 'bna', 'C03p91000' => 'bna', 'C04p63260' => 'bna', 'C05p27050' => 'bna', 'C06p08750' => 'bna', 'C06p11490' => 'bna', 'C07p02820' => 'bna', 'C07p17180' => 'bna', 'C07p29440' => 'bna', 'C07p63730' => 'bna', 'C09p39260' => 'bna', 'CAN.G1164.34' => 'can', 'CAN.G1164.39' => 'can', 'CAN.G1530.3' => 'can', 'CAN.G162.61' => 'can', 'CAN.G176.6' => 'can', 'CAN.G289.49' => 'can', 'CAN.G370.21' => 'can', 'CAN.G370.22' => 'can', 'CAN.G371.117' => 'can', 'CAN.G58.37' => 'can', 'CAN.G588.98' => 'can', 'CANSAT21G2266' => 'cansat', 'CANSAT25G2799' => 'cansat', 'CANSAT35G0862' => 'cansat', 'CANSAT35G1704' => 'cansat', 'CANSAT35G1760' => 'cansat', 'CANSAT56G3971' => 'cansat', 'CANSAT56G4116' => 'cansat', 'CANSAT80G1259' => 'cansat', 'CARHR027730' => 'chi', 'CARHR033880' => 'chi', 'CARHR043270' => 'chi', 'CARHR145330' => 'chi', 'CARHR145340' => 'chi', 'CARHR175570' => 'chi', 'CARHR181570' => 'chi', 'CARHR258470' => 'chi', 'CARHR260490' => 'chi', 'CARHR294220' => 'chi', 'Carub.0001s2668' => 'cru', 'Carub.0001s3257' => 'cru', 'Carub.0001s4220' => 'cru', 'Carub.0005s0179' => 'cru', 'Carub.0006s2807' => 'cru', 'Carub.0007s0039' => 'cru', 'Carub.0008s0169' => 'cru', 'Carub.0008s0636' => 'cru', 'Ca_00338_v3' => 'car', 'Ca_00542_v3' => 'car', 'Ca_01844_v3' => 'car', 'Ca_10611_v3' => 'car', 'Ca_13326_v3' => 'car', 'Ca_17944_v3' => 'car', 'Ca_18546_v3' => 'car', 'Ca_24219_v3' => 'car', 'Ca_29972_v3' => 'car', 'CBR_g3681' => 'cbr', 'CBR_g40021' => 'cbr', 'Cc01_g08140' => 'ccan', 'Cc02_g13410' => 'ccan', 'Cc02_g37480' => 'ccan', 'Cc05_g12030' => 'ccan', 'Cc09_g03370' => 'ccan', 'Cc09_g10300' => 'ccan', 'Cc10_g03530' => 'ccan', 'Cc10_g11380' => 'ccan', 'CDE01G0176' => 'cde', 'CDE02G0675' => 'cde', 'CDE02G0942' => 'cde', 'CDE02G1153' => 'cde', 'CDE02G4177' => 'cde', 'CDE04G2117' => 'cde', 'CDE04G2736' => 'cde', 'CDE08G1161' => 'cde', 'CDE09G1238' => 'cde', 'Cfa000467' => 'cfa', 'Cfa000947' => 'cfa', 'Cfa004969' => 'cfa', 'Cfa005284' => 'cfa', 'Cfa008993' => 'cfa', 'Cfa018187' => 'cfa', 'Cfa018454' => 'cfa', 'Cfa020585' => 'cfa', 'Ciclev10000424m.g' => 'ccl', 'Ciclev10003605m.g' => 'ccl', 'Ciclev10007828m.g' => 'ccl', 'Ciclev10014620m.g' => 'ccl', 'Ciclev10015169m.g' => 'ccl', 'Ciclev10018291m.g' => 'ccl', 'Ciclev10028256m.g' => 'ccl', 'Ciclev10033822m.g' => 'ccl', 'CiPaw.05G060300' => 'cil', 'CiPaw.05G085000' => 'cil', 'CiPaw.06G083700' => 'cil', 'CiPaw.06G120300' => 'cil', 'CiPaw.09G060500' => 'cil', 'CiPaw.09G123800' => 'cil', 'CiPaw.11G169700' => 'cil', 'CiPaw.12G118300' => 'cil', 'CiPaw.15G071000' => 'cil', 'CiPaw.15G081900' => 'cil', 'ClCG01G024610' => 'cla', 'ClCG03G006070' => 'cla', 'ClCG05G019250' => 'cla', 'ClCG09G009500' => 'cla', 'ClCG11G008200' => 'cla', 'ClCG11G018080' => 'cla', 'COL.COLO4_17373' => 'col', 'COL.COLO4_22994' => 'col', 'COL.COLO4_26389' => 'col', 'COL.COLO4_27170' => 'col', 'COL.COLO4_31074' => 'col', 'COL.COLO4_31465' => 'col', 'COL.COLO4_36438' => 'col', 'COL.COLO4_36439' => 'col', 'Cpa.g.c38781' => 'cpa', 'Cpa.g.sc128.12' => 'cpa', 'Cpa.g.sc166.7' => 'cpa', 'Cpa.g.sc166.8' => 'cpa', 'Cpa.g.sc20.111' => 'cpa', 'Cpa.g.sc27.31' => 'cpa', 'Cpa.g.sc64.36' => 'cpa', 'Cpa.g.sc64.37' => 'cpa', 'Cpa.g.sc66.49' => 'cpa', 'Cpa.g.sc80.64' => 'cpa', 'CsaV3_1G012320' => 'csa', 'CsaV3_2G008480' => 'csa', 'CsaV3_2G033450' => 'csa', 'CsaV3_3G044830' => 'csa', 'CsaV3_4G033710' => 'csa', 'CsaV3_6G051730' => 'csa', 'CsaV3_7G025350' => 'csa', 'CSS0001067' => 'camsi', 'CSS0005996' => 'camsi', 'CSS0006590' => 'camsi', 'CSS0009673' => 'camsi', 'CSS0010201' => 'camsi', 'CSS0010549' => 'camsi', 'CSS0011364' => 'camsi', 'CSS0014473' => 'camsi', 'CSS0014961' => 'camsi', 'CSS0020191' => 'camsi', 'CSS0021165' => 'camsi', 'CSS0022306' => 'camsi', 'CSS0030591' => 'camsi', 'CSS0030696' => 'camsi', 'CSS0032653' => 'camsi', 'CSS0037487' => 'camsi', 'CSS0041102' => 'camsi', 'CSS0041261' => 'camsi', 'CSS0046246' => 'camsi', 'CSS0049256' => 'camsi', 'DCAR_004075' => 'dca', 'DCAR_011538' => 'dca', 'DCAR_019553' => 'dca', 'DCAR_020952' => 'dca', 'DCAR_021739' => 'dca', 'DCAR_027407' => 'dca', 'DCAR_027913' => 'dca', 'DCAR_028066' => 'dca', 'Dinv05899' => 'din', 'Dinv07563' => 'din', 'Dinv08010' => 'din', 'Dinv14125' => 'din', 'Dinv20172' => 'din', 'Dinv30743' => 'din', 'Dinv31229' => 'din', 'Dinv34162' => 'din', 'Dinv36028' => 'din', 'Dinv39368' => 'din', 'Dinv40565' => 'din', 'Dinv41706' => 'din', 'Duzib052G0089' => 'dzi', 'Duzib116G0641' => 'dzi', 'Duzib132G0069' => 'dzi', 'Duzib132G1219' => 'dzi', 'Duzib147G0278' => 'dzi', 'Duzib160G0480' => 'dzi', 'Duzib170G0661' => 'dzi', 'Duzib177G0591' => 'dzi', 'Duzib187G1353' => 'dzi', 'Duzib192G0858' => 'dzi', 'Duzib192G0883' => 'dzi', 'Duzib213G0506' => 'dzi', 'Duzib235G0289' => 'dzi', 'Duzib251G0422' => 'dzi', 'ECA232G3898' => 'eca', 'ECA233G5950' => 'eca', 'ECA234G1699' => 'eca', 'ECA234G2421' => 'eca', 'ECA236G0426' => 'eca', 'ECA236G4331' => 'eca', 'ECA248G2573' => 'eca', 'EL10Ac1g00077' => 'bvu', 'EL10Ac1g01746' => 'bvu', 'EL10Ac2g03464' => 'bvu', 'EL10Ac4g08176' => 'bvu', 'EL10Ac7g17521' => 'bvu', 'EL10Ac8g20386' => 'bvu', 'EL10Ac9g21343' => 'bvu', 'EL10Ac9g22688' => 'bvu', 'Eucgr.B03434' => 'egr', 'Eucgr.D00618' => 'egr', 'Eucgr.E02395' => 'egr', 'Eucgr.F01129' => 'egr', 'Eucgr.F02622' => 'egr', 'Eucgr.F04207' => 'egr', 'FAN01G0570' => 'fan', 'FAN03G3351' => 'fan', 'FAN06G3702' => 'fan', 'FAN07G2149' => 'fan', 'FAN10G3758' => 'fan', 'FAN11G1170' => 'fan', 'FAN11G2050' => 'fan', 'FAN11G2724' => 'fan', 'FAN12G1700' => 'fan', 'FAN12G2028' => 'fan', 'FAN15G1160' => 'fan', 'FAN15G3063' => 'fan', 'FAN16G2540' => 'fan', 'FAN16G3077' => 'fan', 'FAN16G3624' => 'fan', 'FAN17G0221' => 'fan', 'FAN20G2492' => 'fan', 'FAN20G2905' => 'fan', 'FAN21G0548' => 'fan', 'FAN21G1300' => 'fan', 'FAN22G0077' => 'fan', 'FAN22G1315' => 'fan', 'FAN24G1280' => 'fan', 'FAN24G1445' => 'fan', 'FAN24G3527' => 'fan', 'FAN25G0464' => 'fan', 'FAN25G2885' => 'fan', 'FAN25G3270' => 'fan', 'FAN27G1101' => 'fan', 'FAN27G2846' => 'fan', 'FAN27G3524' => 'fan', 'FvH4_2g11770' => 'fve', 'FvH4_2g15630' => 'fve', 'FvH4_3g05570' => 'fve', 'FvH4_3g09110' => 'fve', 'FvH4_3g19940' => 'fve', 'FvH4_4g04821' => 'fve', 'FvH4_4g31480' => 'fve', 'FvH4_7g01740' => 'fve', 'Glyma.05G130400' => 'gma', 'Glyma.05G156400' => 'gma', 'Glyma.07G197000' => 'gma', 'Glyma.08G085151' => 'gma', 'Glyma.08G114500' => 'gma', 'Glyma.08G300400' => 'gma', 'Glyma.10G215800' => 'gma', 'Glyma.12G224400' => 'gma', 'Glyma.13G179300' => 'gma', 'Glyma.13G218151' => 'gma', 'Glyma.13G238800' => 'gma', 'Glyma.13G276900' => 'gma', 'Glyma.14G078200' => 'gma', 'Glyma.15G074500' => 'gma', 'Glyma.15G094100' => 'gma', 'Glyma.17G247200' => 'gma', 'Glyma.18G120100' => 'gma', 'Glyma.20G176000' => 'gma', 'Gohir.A01G063600' => 'ghi', 'Gohir.A01G170301' => 'ghi', 'Gohir.A02G060500' => 'ghi', 'Gohir.A05G133850' => 'ghi', 'Gohir.A05G161400' => 'ghi', 'Gohir.A06G012900' => 'ghi', 'Gohir.A06G035901' => 'ghi', 'Gohir.A06G127100' => 'ghi', 'Gohir.A06G210500' => 'ghi', 'Gohir.A08G008650' => 'ghi', 'Gohir.A09G072700' => 'ghi', 'Gohir.A09G088301' => 'ghi', 'Gohir.A10G040600' => 'ghi', 'Gohir.A12G036300' => 'ghi', 'Gohir.A12G143350' => 'ghi', 'Gohir.A12G165500' => 'ghi', 'Gohir.A13G145700' => 'ghi', 'Gohir.D01G050000' => 'ghi', 'Gohir.D01G051366' => 'ghi', 'Gohir.D01G161350' => 'ghi', 'Gohir.D02G065900' => 'ghi', 'Gohir.D05G164200' => 'ghi', 'Gohir.D05G355500' => 'ghi', 'Gohir.D06G010400' => 'ghi', 'Gohir.D06G111250' => 'ghi', 'Gohir.D06G132000' => 'ghi', 'Gohir.D06G210500' => 'ghi', 'Gohir.D07G165675' => 'ghi', 'Gohir.D08G062240' => 'ghi', 'Gohir.D08G086101' => 'ghi', 'Gohir.D08G138060' => 'ghi', 'Gohir.D09G072300' => 'ghi', 'Gohir.D10G041400' => 'ghi', 'Gohir.D11G191020' => 'ghi', 'Gohir.D11G212066' => 'ghi', 'Gohir.D12G036300' => 'ghi', 'Gohir.D12G168600' => 'ghi', 'Gohir.D13G150600' => 'ghi', 'Gorai.001G057300' => 'gra', 'Gorai.002G069900' => 'gra', 'Gorai.002G200000' => 'gra', 'Gorai.003G067600' => 'gra', 'Gorai.005G074800' => 'gra', 'Gorai.006G087300' => 'gra', 'Gorai.008G037500' => 'gra', 'Gorai.008G181400' => 'gra', 'Gorai.009G169400' => 'gra', 'Gorai.009G387900' => 'gra', 'Gorai.010G013300' => 'gra', 'Gorai.010G153800' => 'gra', 'Gorai.010G255800' => 'gra', 'Gorai.011G043700' => 'gra', 'Gorai.011G198900' => 'gra', 'Gorai.013G168400' => 'gra', 'GSVIVG01005212001' => 'vvi', 'GSVIVG01006163001' => 'vvi', 'GSVIVG01009625001' => 'vvi', 'GSVIVG01014338001' => 'vvi', 'GSVIVG01020005001' => 'vvi', 'GSVIVG01021450001' => 'vvi', 'GSVIVG01023975001' => 'vvi', 'GSVIVG01034490001' => 'vvi', 'HanXRQChr04g0112071' => 'han', 'HanXRQChr05g0131151' => 'han', 'HanXRQChr09g0262371' => 'han', 'HanXRQChr09g0268401' => 'han', 'HanXRQChr10g0279241' => 'han', 'HanXRQChr10g0297961' => 'han', 'HanXRQChr11g0326231' => 'han', 'HanXRQChr11g0328471' => 'han', 'HanXRQChr16g0507941' => 'han', 'HanXRQChr17g0560211' => 'han', 'Haze_02108' => 'cav', 'Haze_02428' => 'cav', 'Haze_05593' => 'cav', 'Haze_06448' => 'cav', 'Haze_09427' => 'cav', 'Haze_12022' => 'cav', 'Haze_17612' => 'cav', 'Haze_17928' => 'cav', 'Hma1.2p1_0032F.1_g019250' => 'hma', 'Hma1.2p1_0163F.1_g072690' => 'hma', 'Hma1.2p1_0265F.1_g106710' => 'hma', 'Hma1.2p1_0286F.1_g113970' => 'hma', 'Hma1.2p1_0363F.1_g136640' => 'hma', 'Hma1.2p1_0584F.1_g183470' => 'hma', 'Hma1.2p1_0885F.1_g232570' => 'hma', 'HPP92_006022' => 'vpl', 'HPP92_007320' => 'vpl', 'HPP92_011521' => 'vpl', 'HPP92_019387' => 'vpl', 'HPP92_024038' => 'vpl', 'Hund05891' => 'sun', 'Hund06450' => 'sun', 'Hund12053' => 'sun', 'Hund16800' => 'sun', 'Hund21222' => 'sun', 'Hund22896' => 'sun', 'Hund23746' => 'sun', 'Hund27083' => 'sun', 'Lalb_Chr02g0141831' => 'lal', 'Lalb_Chr02g0141841' => 'lal', 'Lalb_Chr05g0220411' => 'lal', 'Lalb_Chr06g0162081' => 'lal', 'Lalb_Chr09g0327651' => 'lal', 'Lalb_Chr13g0295051' => 'lal', 'Lalb_Chr15g0086801' => 'lal', 'Lalb_Chr16g0383781' => 'lal', 'Lalb_Chr16g0383791' => 'lal', 'Lalb_Chr18g0055441' => 'lal', 'Lalb_Chr18g0059611' => 'lal', 'Lalb_Chr20g0109661' => 'lal', 'Lalb_Chr20g0109831' => 'lal', 'Lalb_Chr20g0121871' => 'lal', 'Lalb_Chr22g0355361' => 'lal', 'Lalb_Chr25g0286371' => 'lal', 'Lj1A1187G43' => 'lonja', 'Lj1A1205T50' => 'lonja', 'Lj1A800G33' => 'lonja', 'Lj1C1187T7' => 'lonja', 'Lj1C843T11' => 'lonja', 'Lj1g0010940' => 'lja', 'Lj2A288T69' => 'lonja', 'Lj3g0024276' => 'lja', 'Lj4A47T76' => 'lonja', 'Lj4g0005805' => 'lja', 'Lj4g0006097' => 'lja', 'Lj4g0008528' => 'lja', 'Lj4g0024907' => 'lja', 'Lj5g0012472' => 'lja', 'Lj5g0018648' => 'lja', 'Lj6C789G1' => 'lonja', 'Lj6g0004000' => 'lja', 'Lj7A292G67' => 'lonja', 'Lj7A292T64' => 'lonja', 'Lj9A400T58' => 'lonja', 'Lsat_1_v5_gn_1_126181' => 'lsa', 'Lsat_1_v5_gn_4_123041' => 'lsa', 'Lsat_1_v5_gn_4_133620' => 'lsa', 'Lsat_1_v5_gn_4_53221' => 'lsa', 'Lsat_1_v5_gn_4_71961' => 'lsa', 'Lsat_1_v5_gn_7_105241' => 'lsa', 'Lsat_1_v5_gn_7_21361' => 'lsa', 'Lsat_1_v5_gn_7_28860' => 'lsa', 'Lsat_1_v5_gn_7_31260' => 'lsa', 'Lsat_1_v5_gn_8_52801' => 'lsa', 'Manes.02G191400' => 'mes', 'Manes.03G110100' => 'mes', 'Manes.04G071100' => 'mes', 'Manes.05G100500' => 'mes', 'Manes.05G164700' => 'mes', 'Manes.15G087000' => 'mes', 'Manes.15G121500' => 'mes', 'Manes.16G028300' => 'mes', 'Manes.17G046100' => 'mes', 'Manes.17G069800' => 'mes', 'Manes.18G100500' => 'mes', 'Mapoly0002s0109' => 'mpo', 'Mapoly0024s0007' => 'mpo', 'Mapoly0089s0032' => 'mpo', 'MBI04_g42241_MAGBIO' => 'mbi', 'MBI05_g11988_MAGBIO' => 'mbi', 'MBI05_g35452_MAGBIO' => 'mbi', 'MBI07_g30179_MAGBIO' => 'mbi', 'MBI07_g35859_MAGBIO' => 'mbi', 'MBI07_g35860_MAGBIO' => 'mbi', 'MBI07_g37166_MAGBIO' => 'mbi', 'MBI08_g18172_MAGBIO' => 'mbi', 'MBI09_g08441_MAGBIO' => 'mbi', 'MBI13_g01676_MAGBIO' => 'mbi', 'MBI14_g42955_MAGBIO' => 'mbi', 'MBI16_g13161_MAGBIO' => 'mbi', 'MBI17_g27204_MAGBIO' => 'mbi', 'MBI19_g21595_MAGBIO' => 'mbi', 'MD00G1148400' => 'mdo', 'MD02G1301200' => 'mdo', 'MD03G1227800' => 'mdo', 'MD05G1041100' => 'mdo', 'MD05G1124800' => 'mdo', 'MD05G1284000' => 'mdo', 'MD05G1338800' => 'mdo', 'MD05G1338900' => 'mdo', 'MD07G1022800' => 'mdo', 'MD10G1047500' => 'mdo', 'MD10G1127500' => 'mdo', 'MD10G1262300' => 'mdo', 'MD10G1293800' => 'mdo', 'MD16G1074300' => 'mdo', 'Medtr1g021670' => 'mtr', 'Medtr1g096320' => 'mtr', 'Medtr2g013690' => 'mtr', 'Medtr2g019450' => 'mtr', 'Medtr2g085170' => 'mtr', 'Medtr4g088785' => 'mtr', 'Medtr8g055930' => 'mtr', 'Medtr8g085850' => 'mtr', 'MELO3C002605.2' => 'cme', 'MELO3C003891.2' => 'cme', 'MELO3C004012.2' => 'cme', 'MELO3C007134.2' => 'cme', 'MELO3C008118.2' => 'cme', 'MELO3C016700.2' => 'cme', 'MELO3C024127.2' => 'cme', 'MELO3C033361.2' => 'cme', 'MELO3C033362.2' => 'cme', 'Migut.C00430' => 'egut', 'Migut.C01246' => 'egut', 'Migut.E00101' => 'egut', 'Migut.H01486' => 'egut', 'Migut.H01939' => 'egut', 'Migut.K00360' => 'egut', 'Migut.M00910' => 'egut', 'Migut.M01139' => 'egut', 'Migut.N02677' => 'egut', 'MSTRG.13252' => 'ama', 'MSTRG.14701' => 'ama', 'MSTRG.1521' => 'ama', 'MSTRG.15884' => 'ama', 'MSTRG.16242' => 'ama', 'MSTRG.22285' => 'ama', 'MSTRG.22444' => 'ama', 'MSTRG.2349' => 'ama', 'MSTRG.26308' => 'ama', 'MSTRG.28296' => 'ama', 'MSTRG.9895' => 'ama', 'Nitab4.5_0000110g0060' => 'nta', 'Nitab4.5_0000420g0130' => 'nta', 'Nitab4.5_0000422g0030' => 'nta', 'Nitab4.5_0000560g0180' => 'nta', 'Nitab4.5_0000703g0100' => 'nta', 'Nitab4.5_0000786g0200' => 'nta', 'Nitab4.5_0001336g0020' => 'nta', 'Nitab4.5_0001796g0030' => 'nta', 'Nitab4.5_0003348g0060' => 'nta', 'Nitab4.5_0003698g0040' => 'nta', 'Nitab4.5_0003942g0090' => 'nta', 'Nitab4.5_0004775g0070' => 'nta', 'Nitab4.5_0004864g0030' => 'nta', 'Nitab4.5_0005615g0020' => 'nta', 'Nitab4.5_0009288g0030' => 'nta', 'Nitab4.5_0009341g0010' => 'nta', 'Nitab4.5_0009535g0010' => 'nta', 'Nn1g03995' => 'nnu', 'Nn1g04100' => 'nnu', 'Nn1g06530' => 'nnu', 'Nn3g16404' => 'nnu', 'Nn3g17212' => 'nnu', 'Nn3g20776' => 'nnu', 'Nn3g21923' => 'nnu', 'Nn5g27737' => 'nnu', 'Nn5g29461' => 'nnu', 'Nn7g38355' => 'nnu', 'Nn8g39873' => 'nnu', 'Oeu000548.2' => 'oeu', 'Oeu004672.1' => 'oeu', 'Oeu015605.2' => 'oeu', 'Oeu016092.1' => 'oeu', 'Oeu017879.3' => 'oeu', 'Oeu024910.1' => 'oeu', 'Oeu028965.1' => 'oeu', 'Oeu031269.1' => 'oeu', 'Oeu031270.1' => 'oeu', 'Oeu032535.1' => 'oeu', 'Oeu034151.1' => 'oeu', 'Oeu034152.1' => 'oeu', 'Oeu034588.2' => 'oeu', 'Oeu050846.1' => 'oeu', 'Oeu050849.2' => 'oeu', 'Oeu051063.2' => 'oeu', 'Oeu052368.1' => 'oeu', 'Oeu052370.1' => 'oeu', 'Os01g0210400' => 'osa', 'Os01g0304300' => 'osa', 'Os01g0749100' => 'osa', 'Os02g0745800' => 'osa', 'Os03g0769050' => 'osa', 'Os05g0531500' => 'osa', 'Os06g0724300' => 'osa', 'Os11g0198100' => 'osa', 'Peaxi162Scf00069g01425' => 'pax', 'Peaxi162Scf00280g00811' => 'pax', 'Peaxi162Scf00310g00615' => 'pax', 'Peaxi162Scf00362g00542' => 'pax', 'Peaxi162Scf00461g00310' => 'pax', 'Peaxi162Scf00530g00118' => 'pax', 'Peaxi162Scf00541g00057' => 'pax', 'Peaxi162Scf00661g00017' => 'pax', 'Peaxi162Scf00926g00027' => 'pax', 'Peaxi162Scf01064g00263' => 'pax', 'Peaxi162Scf01211g00135' => 'pax', 'PGR004G2336' => 'pgr', 'PGR042G0327' => 'pgr', 'PGR042G1957' => 'pgr', 'PGR042G2003' => 'pgr', 'PGR042G3929' => 'pgr', 'PGR083G1137' => 'pgr', 'PGR083G1364' => 'pgr', 'PGSC0003DMG400003381' => 'stu', 'PGSC0003DMG400003417' => 'stu', 'PGSC0003DMG400008981' => 'stu', 'PGSC0003DMG400012417' => 'stu', 'PGSC0003DMG400012823' => 'stu', 'PGSC0003DMG400016885' => 'stu', 'PGSC0003DMG400022812' => 'stu', 'PGSC0003DMG400029726' => 'stu', 'PGSC0003DMG401009243' => 'stu', 'PGSC0003DMG401031505' => 'stu', 'PGSC0003DMG402031505' => 'stu', 'Phvul.001G017600' => 'pvu', 'Phvul.002G193500' => 'pvu', 'Phvul.002G228900' => 'pvu', 'Phvul.002G236800' => 'pvu', 'Phvul.003G049500' => 'pvu', 'Phvul.005G072000' => 'pvu', 'Phvul.006G164800' => 'pvu', 'Phvul.006G185100' => 'pvu', 'Phvul.007G090000' => 'pvu', 'Potri.001G399800' => 'ptr', 'Potri.002G149900' => 'ptr', 'Potri.004G044100' => 'ptr', 'Potri.004G177600' => 'ptr', 'Potri.009G138000' => 'ptr', 'Potri.010G094000' => 'ptr', 'Potri.011G053000' => 'ptr', 'Potri.011G119300' => 'ptr', 'Potri.013G113700' => 'ptr', 'Potri.018G107800' => 'ptr', 'Potri.019G084100' => 'ptr', 'Pp3c14_23720' => 'ppa', 'Pp3c16_6340' => 'ppa', 'Pp3c23_13420' => 'ppa', 'Pp3c24_2740' => 'ppa', 'Pp3c25_860' => 'ppa', 'Pp3c8_21750' => 'ppa', 'Prupe.1G273000' => 'ppe', 'Prupe.1G273700' => 'ppe', 'Prupe.1G274100' => 'ppe', 'Prupe.2G023300' => 'ppe', 'Prupe.4G048000' => 'ppe', 'Prupe.4G080400' => 'ppe', 'Prupe.4G181200' => 'ppe', 'Prupe.8G056900' => 'ppe', 'Prupe.8G168700' => 'ppe', 'Psat1g189080' => 'psa', 'Psat1g204760' => 'psa', 'Psat4g175560' => 'psa', 'Psat4g177720' => 'psa', 'Psat5g244240' => 'psa', 'Psat6g010720' => 'psa', 'Psat6g187200' => 'psa', 'Psat7g072040' => 'psa', 'PSO017G3501' => 'pso', 'PSO063G2148' => 'pso', 'PSO063G5608' => 'pso', 'PSO210G6392' => 'pso', 'PSO541G2319' => 'pso', 'PSO541G2836' => 'pso', 'PSO541G4012' => 'pso', 'PSO541G6253' => 'pso', 'PSO675G0580' => 'pso', 'PSO675G0856' => 'pso', 'PSO675G5635' => 'pso', 'PSO675G9157' => 'pso', 'PSO832G1660' => 'pso', 'PSO832G1969' => 'pso', 'QL02p007186' => 'qlo', 'QL02p033904' => 'qlo', 'QL03p064391' => 'qlo', 'QL05p040593' => 'qlo', 'QL05p058242' => 'qlo', 'QL08p021825' => 'qlo', 'QL11p004981' => 'qlo', 'RcHm_v2.0_Chr1g0318301' => 'rch', 'RcHm_v2.0_Chr4g0418501' => 'rch', 'RcHm_v2.0_Chr4g0439971' => 'rch', 'RcHm_v2.0_Chr5g0008541' => 'rch', 'RcHm_v2.0_Chr5g0014101' => 'rch', 'RcHm_v2.0_Chr5g0014131' => 'rch', 'RcHm_v2.0_Chr5g0033621' => 'rch', 'RcHm_v2.0_Chr6g0272041' => 'rch', 'RcHm_v2.0_Chr6g0278831' => 'rch', 'Rhsim02G0130400' => 'rsi', 'Rhsim02G0171100' => 'rsi', 'Rhsim05G0053000' => 'rsi', 'Rhsim05G0053100' => 'rsi', 'Rhsim06G0096500' => 'rsi', 'Rhsim06G0096600' => 'rsi', 'Rhsim06G0199100' => 'rsi', 'Rhsim12G0062300' => 'rsi', 'Rhsim12G0062800' => 'rsi', 'Sabra02G0118600' => 'sbr', 'Sabra04G0027300' => 'sbr', 'Sabra04G0119500' => 'sbr', 'Sabra08G0112500' => 'sbr', 'Sabra11G0036800' => 'sbr', 'Sabra11G0103800' => 'sbr', 'Sabra13G0096300' => 'sbr', 'Sabra16G0262300' => 'sbr', 'Sabra18G0091700' => 'sbr', 'Sabra19G0095400' => 'sbr', 'SalBow6G3080' => 'sbo', 'SalBow7G1157' => 'sbo', 'SalBow7G2123' => 'sbo', 'SalBow7G2285' => 'sbo', 'SalBow7G3537' => 'sbo', 'SalBow8G2947' => 'sbo', 'SalBow8G4463' => 'sbo', 'SalBow8G5466' => 'sbo', 'Sc01g0001750' => 'sci', 'Sc02g0006640' => 'sci', 'Sc02g0006670' => 'sci', 'Sc04g0008220' => 'sci', 'Sc05g0006190' => 'sci', 'Sc08g0002760' => 'sci', 'Sc17g0006170' => 'sci', 'Sc22g0002050' => 'sci', 'Sc23g0001190' => 'sci', 'Sc24g0000980' => 'sci', 'Sed0006245' => 'sed', 'Sed0007543' => 'sed', 'Sed0009411' => 'sed', 'Sed0010765' => 'sed', 'Sed0012944' => 'sed', 'Sed0014682' => 'sed', 'Sed0016174' => 'sed', 'Sed0016796' => 'sed', 'Sed0020317' => 'sed', 'Sed0021467' => 'sed', 'SEGI_01316' => 'sgi', 'SEGI_03374' => 'sgi', 'SEGI_16265' => 'sgi', 'SEGI_18569' => 'sgi', 'SEGI_20351' => 'sgi', 'SEGI_26395' => 'sgi', 'SEGI_29469' => 'sgi', 'SEGI_34771' => 'sgi', 'SEGI_36769' => 'sgi', 'SEGI_37139' => 'sgi', 'SGA_v2.0_scaffold100G29687' => 'sas', 'SGA_v2.0_scaffold118G32472' => 'sas', 'SGA_v2.0_scaffold14G07051' => 'sas', 'SGA_v2.0_scaffold183G39845' => 'sas', 'SGA_v2.0_scaffold1G00174' => 'sas', 'SGA_v2.0_scaffold22G09714' => 'sas', 'SGA_v2.0_scaffold333G48992' => 'sas', 'SGA_v2.0_scaffold46G17491' => 'sas', 'SGA_v2.0_scaffold49G18294' => 'sas', 'SGA_v2.0_scaffold63G21658' => 'sas', 'SHI01741' => 'shi', 'SHI05771' => 'shi', 'SHI18077' => 'shi', 'SHI20525' => 'shi', 'SHI20527' => 'shi', 'SHI20528' => 'shi', 'SMO172G0185' => 'smo', 'SMO198G0020' => 'smo', 'SMO351G0006' => 'smo', 'SMO356G0118' => 'smo', 'SMO358G0296' => 'smo', 'SMO367G0079' => 'smo', 'SMO367G1277' => 'smo', 'Solyc01g014220.3' => 'sly', 'Solyc01g111770.2' => 'sly', 'Solyc02g078180.3' => 'sly', 'Solyc03g006430.3' => 'sly', 'Solyc03g006456.1' => 'sly', 'Solyc03g079860.2' => 'sly', 'Solyc04g079770.3' => 'sly', 'Solyc05g007430.4' => 'sly', 'Solyc07g063150.3' => 'sly', 'Solyc08g016620.3' => 'sly', 'Solyc09g057590.3' => 'sly', 'Solyc09g057600.1' => 'sly', 'Solyc10g009050.3' => 'sly', 'Solyc11g017420.2' => 'sly', 'Sopen01g053810' => 'spe', 'Sopen02g023040' => 'spe', 'Sopen03g002440' => 'spe', 'Sopen04g033350' => 'spe', 'Sopen05g003310' => 'spe', 'Sopen07g004050' => 'spe', 'Sopen07g031340' => 'spe', 'Sopen08g006990' => 'spe', 'Sopen10g004830' => 'spe', 'Sopen11g009370' => 'spe', 'Sp1g24450' => 'spa', 'Sp1g29670' => 'spa', 'Sp1g39600' => 'spa', 'Sp2g11080' => 'spa', 'Sp2g13970' => 'spa', 'Sp4g16130' => 'spa', 'Sp6g13080' => 'spa', 'Sp7g37270' => 'spa', 'TAR371G0065' => 'tar', 'TAR376G0340' => 'tar', 'TAR376G0435' => 'tar', 'TAR381G0002' => 'tar', 'TAR381G1236' => 'tar', 'TAR624G0055' => 'tar', 'TAR624G0324' => 'tar', 'TAR624G0696' => 'tar', 'TAR624G0906' => 'tar', 'TAR625G0107' => 'tar', 'TAR626G0015' => 'tar', 'TAR626G1356' => 'tar', 'TAR627G0888' => 'tar', 'TAR628G0399' => 'tar', 'TAR628G1327' => 'tar', 'TAR629G2831' => 'tar', 'TAR629G2874' => 'tar', 'TAR633G1432' => 'tar', 'TAR633G2771' => 'tar', 'THA.LOC104803394' => 'tha', 'THA.LOC104805153' => 'tha', 'THA.LOC104806784' => 'tha', 'THA.LOC104810473' => 'tha', 'THA.LOC104813100' => 'tha', 'THA.LOC104814215' => 'tha', 'THA.LOC104815554' => 'tha', 'THA.LOC104820544' => 'tha', 'THA.LOC104824754' => 'tha', 'THA.LOC104827717' => 'tha', 'Thecc.02G031400' => 'tca', 'Thecc.02G055900' => 'tca', 'Thecc.02G350800' => 'tca', 'Thecc.06G150900' => 'tca', 'Thecc.06G186600' => 'tca', 'Thecc.07G089600' => 'tca', 'Thecc.08G020400' => 'tca', 'Thecc.08G182100' => 'tca', 'Thhalv10000873m.g' => 'esa', 'Thhalv10004185m.g' => 'esa', 'Thhalv10006981m.g' => 'esa', 'Thhalv10007204m.g' => 'esa', 'Thhalv10011374m.g' => 'esa', 'Thhalv10013482m.g' => 'esa', 'Thhalv10017801m.g' => 'esa', 'Thhalv10024983m.g' => 'esa', 'TPR.G12072' => 'tpr', 'TPR.G15769' => 'tpr', 'TPR.G16504' => 'tpr', 'TPR.G16506' => 'tpr', 'TPR.G24345' => 'tpr', 'TPR.G26666' => 'tpr', 'TPR.G27320' => 'tpr', 'TPR.G31819' => 'tpr', 'TPR.G38879' => 'tpr', 'TPR.G39015' => 'tpr', 'TPR.G8819' => 'tpr', 'TWI09G0924' => 'twi', 'TWI12G0811' => 'twi', 'TWI12G1294' => 'twi', 'TWI31G0150' => 'twi', 'TWI36G1262' => 'twi', 'TWI38G1287' => 'twi', 'TWI38G1633' => 'twi', 'TWI38G1982' => 'twi', 'TWI39G0116' => 'twi', 'TWI60G1011' => 'twi', 'TWI63G0171' => 'twi', 'TWI73G0839' => 'twi', 'TWI79G1511' => 'twi', 'unitig_0.g915' => 'ugi', 'unitig_0.g916' => 'ugi', 'unitig_21.g20219' => 'ugi', 'unitig_21.g20416' => 'ugi', 'unitig_578.g16132' => 'ugi', 'unitig_578.g16718' => 'ugi', 'unitig_62.g23481' => 'ugi', 'unitig_744.g24535' => 'ugi', 'unitig_749.g13525' => 'ugi', 'vmacro01248' => 'vma', 'vmacro02290' => 'vma', 'vmacro10946' => 'vma', 'vmacro11865' => 'vma', 'vmacro12493' => 'vma', 'vmacro17322' => 'vma', 'vmacro21599' => 'vma', 'vmacro23041' => 'vma', 'VMungo0251G0004' => 'vmu', 'VMungo0251G2639' => 'vmu', 'VMungo0251G2967' => 'vmu', 'VMungo0540G0864' => 'vmu', 'VMungo0540G1569' => 'vmu', 'VMungo0647G0317' => 'vmu', 'VMungo0720G1373' => 'vmu', 'VMungo0720G1508' => 'vmu', 'VMungo1080G0485' => 'vmu', 'VMungo1215G3177' => 'vmu', 'Zm00001eb112600' => 'zma', 'Zm00001eb120220' => 'zma', 'Zm00001eb153240' => 'zma', 'Zm00001eb168880' => 'zma', 'Zm00001eb213920' => 'zma', 'Zm00001eb228280' => 'zma', 'Zm00001eb254580' => 'zma', 'Zm00001eb272180' => 'zma', 'Zm00001eb293190' => 'zma', 'Zm00001eb322930' => 'zma', 'Zm00001eb353360' => 'zma', 'Zm00001eb353390' => 'zma', 'Zm00001eb353430' => 'zma', 'Zm00001eb353440' => 'zma', 'Zm00001eb353780' => 'zma' ), 'gf_id' => 'HOM05D000499', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000499' ), 'data_identifier' => 'HOM05D000499', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000499', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1066', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p29780' => 'bna', 'A02p33180' => 'bna', 'A03p16470' => 'bna', 'A03p66010' => 'bna', 'A04p25970' => 'bna', 'A06p01270' => 'bna', 'A06p46080' => 'bna', 'A07p11400' => 'bna', 'A08p01840' => 'bna', 'A08p08230' => 'bna', 'A08p25740' => 'bna', 'A09p32070' => 'bna', 'A09p37830' => 'bna', 'A09p42840' => 'bna', 'A09p42850' => 'bna', 'Aa31LG10G2060' => 'aar', 'Aa31LG2G7410' => 'aar', 'Aa31LG6G10200' => 'aar', 'Aa31LG6G16680' => 'aar', 'Aa31LG6G8470' => 'aar', 'Aa31LG9G12730' => 'aar', 'Aa31LG9G13680' => 'aar', 'Aa31LG9G14920' => 'aar', 'Aa31LG9G6650' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4977' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5467' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3254' => 'aag', 'Actinidia02578' => 'ach', 'Actinidia07693' => 'ach', 'Actinidia08413' => 'ach', 'Actinidia08414' => 'ach', 'Actinidia15289' => 'ach', 'Actinidia19871' => 'ach', 'Actinidia21475' => 'ach', 'Actinidia22576' => 'ach', 'Actinidia28327' => 'ach', 'Actinidia32491' => 'ach', 'Actinidia39463' => 'ach', 'Actinidia39571' => 'ach', 'Ah.01g013750' => 'amhyb', 'Ah.01g023210' => 'amhyb', 'Ah.04g164850' => 'amhyb', 'Ah.05g178060' => 'amhyb', 'Ah.07g204270' => 'amhyb', 'Ah.07g208480' => 'amhyb', 'Ah.09g237410' => 'amhyb', 'Ah.14g089460' => 'amhyb', 'AL1G41790' => 'aly', 'AL1G49050' => 'aly', 'AL1G53810' => 'aly', 'AL1G61400' => 'aly', 'AL4G18580' => 'aly', 'AL5G12510' => 'aly', 'AL5G12540' => 'aly', 'AL6G43230' => 'aly', 'AL7G10370' => 'aly', 'AL7G19250' => 'aly', 'AL8G12240' => 'aly', 'AL8G18540' => 'aly', 'Aqoxy1G02409' => 'aox', 'Aqoxy2G03993' => 'aox', 'Aqoxy3G03357' => 'aox', 'Aqoxy4G00785' => 'aox', 'Aqoxy5G02598' => 'aox', 'Aqoxy6G00132' => 'aox', 'Aqoxy7G01776' => 'aox', 'Aqoxy7G02316' => 'aox', 'Aqoxy7G03973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.12AFKW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B8730' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27IQR1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3F75VG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3RE0GA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41TCQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.527VTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FIR39' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5W8UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DA38EV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ63HS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H1I32C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HC27T5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4M8AP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7N3CZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9UVDZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LS1NQA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT1D4B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SKC4TM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCFV76' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF9Q1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQWD9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1ZM88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WE07RT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YCK7VH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJE6Q6' => 'arhy', 'AT1G28240' => 'ath', 'AT1G34550' => 'ath', 'AT1G53040' => 'ath', 'AT2G02910' => 'ath', 'AT4G09630' => 'ath', 'AT4G38500' => 'ath', 'AT5G42660' => 'ath', 'AT5G46220' => 'ath', 'ATR0152G026' => 'atr', 'ATR0564G343' => 'atr', 'ATR0706G151' => 'atr', 'ATR0733G207' => 'atr', 'ATR0751G234' => 'atr', 'ATR0807G048' => 'atr', 'ATR1091G084' => 'atr', 'Atru.chr10.1229' => 'acertr', 'Atru.chr10.1230' => 'acertr', 'Atru.chr10.1874' => 'acertr', 'Atru.chr11.1808' => 'acertr', 'Atru.chr13.1795' => 'acertr', 'Atru.chr13.570' => 'acertr', 'Atru.chr2.2608' => 'acertr', 'Atru.chr2.2609' => 'acertr', 'Atru.chr5.3428' => 'acertr', 'Atru.chr8.1171' => 'acertr', 'AUR62004651' => 'cqu', 'AUR62008675' => 'cqu', 'AUR62010014' => 'cqu', 'AUR62013004' => 'cqu', 'AUR62014825' => 'cqu', 'AUR62015015' => 'cqu', 'AUR62015151' => 'cqu', 'AUR62017020' => 'cqu', 'AUR62019422' => 'cqu', 'AUR62023570' => 'cqu', 'AUR62025571' => 'cqu', 'AUR62029098' => 'cqu', 'AUR62033863' => 'cqu', 'AUR62034296' => 'cqu', 'AUR62040075' => 'cqu', 'BcaB02g07334' => 'bca', 'BcaB02g10575' => 'bca', 'BcaB03g12119' => 'bca', 'BcaB03g12120' => 'bca', 'BcaB03g13945' => 'bca', 'BcaB04g17123' => 'bca', 'BcaB04g17867' => 'bca', 'BcaB04g19839' => 'bca', 'BcaB07g30317' => 'bca', 'BcaB07g32432' => 'bca', 'BcaB07g33362' => 'bca', 'BcaB08g36611' => 'bca', 'BcaC01g00028' => 'bca', 'BcaC01g01356' => 'bca', 'BcaC01g02034' => 'bca', 'BcaC01g06051' => 'bca', 'BcaC03g16839' => 'bca', 'BcaC03g17176' => 'bca', 'BcaC05g26829' => 'bca', 'BcaC06g31490' => 'bca', 'BcaC06g35344' => 'bca', 'BcaC06g36570' => 'bca', 'BcaC07g37537' => 'bca', 'BcaC08g43491' => 'bca', 'BcaC08g43773' => 'bca', 'BcaNung00234' => 'bca', 'BcaNung01982' => 'bca', 'BcaNung03707' => 'bca', 'BcaNung06454' => 'bca', 'BolC2t10762H' => 'bol', 'BolC2t11191H' => 'bol', 'BolC3t14322H' => 'bol', 'BolC3t19747H' => 'bol', 'BolC3t21425H' => 'bol', 'BolC4t27800H' => 'bol', 'BolC5t31423H' => 'bol', 'BolC6t35951H' => 'bol', 'BolC6t36282H' => 'bol', 'BolC7t40678H' => 'bol', 'BolC7t40679H' => 'bol', 'BolC7t42222H' => 'bol', 'BolC7t43492H' => 'bol', 'BolC7t46785H' => 'bol', 'BolC8t47853H' => 'bol', 'BolC9t56805H' => 'bol', 'BraA02t08000Z' => 'bra', 'BraA02t08341Z' => 'bra', 'BraA03t10936Z' => 'bra', 'BraA03t15657Z' => 'bra', 'BraA04t18100Z' => 'bra', 'BraA05t20523Z' => 'bra', 'BraA06t23353Z' => 'bra', 'BraA06t27473Z' => 'bra', 'BraA06t27769Z' => 'bra', 'BraA07t28928Z' => 'bra', 'BraA08t32236Z' => 'bra', 'BraA08t32841Z' => 'bra', 'BraA08t34524Z' => 'bra', 'BraA09t38742Z' => 'bra', 'BraA09t39295Z' => 'bra', 'C02p47180' => 'bna', 'C02p50990' => 'bna', 'C03p19360' => 'bna', 'C03p74950' => 'bna', 'C03p91000' => 'bna', 'C04p63260' => 'bna', 'C05p27050' => 'bna', 'C06p08750' => 'bna', 'C06p11490' => 'bna', 'C07p02820' => 'bna', 'C07p17180' => 'bna', 'C07p29440' => 'bna', 'C07p63730' => 'bna', 'C09p39260' => 'bna', 'CAN.G1164.34' => 'can', 'CAN.G1164.39' => 'can', 'CAN.G1530.3' => 'can', 'CAN.G162.61' => 'can', 'CAN.G176.6' => 'can', 'CAN.G289.49' => 'can', 'CAN.G370.21' => 'can', 'CAN.G370.22' => 'can', 'CAN.G371.117' => 'can', 'CAN.G58.37' => 'can', 'CAN.G588.98' => 'can', 'CANSAT21G2266' => 'cansat', 'CANSAT25G2799' => 'cansat', 'CANSAT35G0862' => 'cansat', 'CANSAT35G1704' => 'cansat', 'CANSAT35G1760' => 'cansat', 'CANSAT56G3971' => 'cansat', 'CANSAT56G4116' => 'cansat', 'CANSAT80G1259' => 'cansat', 'CARHR027730' => 'chi', 'CARHR033880' => 'chi', 'CARHR043270' => 'chi', 'CARHR145330' => 'chi', 'CARHR145340' => 'chi', 'CARHR175570' => 'chi', 'CARHR181570' => 'chi', 'CARHR258470' => 'chi', 'CARHR260490' => 'chi', 'CARHR294220' => 'chi', 'Carub.0001s2668' => 'cru', 'Carub.0001s3257' => 'cru', 'Carub.0001s4220' => 'cru', 'Carub.0005s0179' => 'cru', 'Carub.0006s2807' => 'cru', 'Carub.0007s0039' => 'cru', 'Carub.0008s0169' => 'cru', 'Carub.0008s0636' => 'cru', 'Ca_00338_v3' => 'car', 'Ca_00542_v3' => 'car', 'Ca_01844_v3' => 'car', 'Ca_10611_v3' => 'car', 'Ca_13326_v3' => 'car', 'Ca_17944_v3' => 'car', 'Ca_18546_v3' => 'car', 'Ca_24219_v3' => 'car', 'Ca_29972_v3' => 'car', 'CBR_g3681' => 'cbr', 'CBR_g40021' => 'cbr', 'Cc01_g08140' => 'ccan', 'Cc02_g13410' => 'ccan', 'Cc02_g37480' => 'ccan', 'Cc05_g12030' => 'ccan', 'Cc09_g03370' => 'ccan', 'Cc09_g10300' => 'ccan', 'Cc10_g03530' => 'ccan', 'Cc10_g11380' => 'ccan', 'CDE01G0176' => 'cde', 'CDE02G0675' => 'cde', 'CDE02G0942' => 'cde', 'CDE02G1153' => 'cde', 'CDE02G4177' => 'cde', 'CDE04G2117' => 'cde', 'CDE04G2736' => 'cde', 'CDE08G1161' => 'cde', 'CDE09G1238' => 'cde', 'Cfa000467' => 'cfa', 'Cfa000947' => 'cfa', 'Cfa004969' => 'cfa', 'Cfa005284' => 'cfa', 'Cfa008993' => 'cfa', 'Cfa018187' => 'cfa', 'Cfa018454' => 'cfa', 'Cfa020585' => 'cfa', 'Ciclev10000424m.g' => 'ccl', 'Ciclev10003605m.g' => 'ccl', 'Ciclev10007828m.g' => 'ccl', 'Ciclev10014620m.g' => 'ccl', 'Ciclev10015169m.g' => 'ccl', 'Ciclev10018291m.g' => 'ccl', 'Ciclev10028256m.g' => 'ccl', 'Ciclev10033822m.g' => 'ccl', 'CiPaw.05G060300' => 'cil', 'CiPaw.05G085000' => 'cil', 'CiPaw.06G083700' => 'cil', 'CiPaw.06G120300' => 'cil', 'CiPaw.09G060500' => 'cil', 'CiPaw.09G123800' => 'cil', 'CiPaw.11G169700' => 'cil', 'CiPaw.12G118300' => 'cil', 'CiPaw.15G071000' => 'cil', 'CiPaw.15G081900' => 'cil', 'ClCG01G024610' => 'cla', 'ClCG03G006070' => 'cla', 'ClCG05G019250' => 'cla', 'ClCG09G009500' => 'cla', 'ClCG11G008200' => 'cla', 'ClCG11G018080' => 'cla', 'COL.COLO4_17373' => 'col', 'COL.COLO4_22994' => 'col', 'COL.COLO4_26389' => 'col', 'COL.COLO4_27170' => 'col', 'COL.COLO4_31074' => 'col', 'COL.COLO4_31465' => 'col', 'COL.COLO4_36438' => 'col', 'COL.COLO4_36439' => 'col', 'Cpa.g.c38781' => 'cpa', 'Cpa.g.sc128.12' => 'cpa', 'Cpa.g.sc166.7' => 'cpa', 'Cpa.g.sc166.8' => 'cpa', 'Cpa.g.sc20.111' => 'cpa', 'Cpa.g.sc27.31' => 'cpa', 'Cpa.g.sc64.36' => 'cpa', 'Cpa.g.sc64.37' => 'cpa', 'Cpa.g.sc66.49' => 'cpa', 'Cpa.g.sc80.64' => 'cpa', 'CsaV3_1G012320' => 'csa', 'CsaV3_2G008480' => 'csa', 'CsaV3_2G033450' => 'csa', 'CsaV3_3G044830' => 'csa', 'CsaV3_4G033710' => 'csa', 'CsaV3_6G051730' => 'csa', 'CsaV3_7G025350' => 'csa', 'CSS0001067' => 'camsi', 'CSS0005996' => 'camsi', 'CSS0006590' => 'camsi', 'CSS0009673' => 'camsi', 'CSS0010201' => 'camsi', 'CSS0010549' => 'camsi', 'CSS0011364' => 'camsi', 'CSS0014473' => 'camsi', 'CSS0014961' => 'camsi', 'CSS0020191' => 'camsi', 'CSS0021165' => 'camsi', 'CSS0022306' => 'camsi', 'CSS0030591' => 'camsi', 'CSS0030696' => 'camsi', 'CSS0032653' => 'camsi', 'CSS0037487' => 'camsi', 'CSS0041102' => 'camsi', 'CSS0041261' => 'camsi', 'CSS0046246' => 'camsi', 'CSS0049256' => 'camsi', 'DCAR_004075' => 'dca', 'DCAR_011538' => 'dca', 'DCAR_019553' => 'dca', 'DCAR_020952' => 'dca', 'DCAR_021739' => 'dca', 'DCAR_027407' => 'dca', 'DCAR_027913' => 'dca', 'DCAR_028066' => 'dca', 'Dinv05899' => 'din', 'Dinv07563' => 'din', 'Dinv08010' => 'din', 'Dinv14125' => 'din', 'Dinv20172' => 'din', 'Dinv30743' => 'din', 'Dinv31229' => 'din', 'Dinv34162' => 'din', 'Dinv36028' => 'din', 'Dinv39368' => 'din', 'Dinv40565' => 'din', 'Dinv41706' => 'din', 'Duzib052G0089' => 'dzi', 'Duzib116G0641' => 'dzi', 'Duzib132G0069' => 'dzi', 'Duzib132G1219' => 'dzi', 'Duzib147G0278' => 'dzi', 'Duzib160G0480' => 'dzi', 'Duzib170G0661' => 'dzi', 'Duzib177G0591' => 'dzi', 'Duzib187G1353' => 'dzi', 'Duzib192G0858' => 'dzi', 'Duzib192G0883' => 'dzi', 'Duzib213G0506' => 'dzi', 'Duzib235G0289' => 'dzi', 'Duzib251G0422' => 'dzi', 'ECA232G3898' => 'eca', 'ECA233G5950' => 'eca', 'ECA234G1699' => 'eca', 'ECA234G2421' => 'eca', 'ECA236G0426' => 'eca', 'ECA236G4331' => 'eca', 'ECA248G2573' => 'eca', 'EL10Ac1g00077' => 'bvu', 'EL10Ac1g01746' => 'bvu', 'EL10Ac2g03464' => 'bvu', 'EL10Ac4g08176' => 'bvu', 'EL10Ac7g17521' => 'bvu', 'EL10Ac8g20386' => 'bvu', 'EL10Ac9g21343' => 'bvu', 'EL10Ac9g22688' => 'bvu', 'Eucgr.B03434' => 'egr', 'Eucgr.D00618' => 'egr', 'Eucgr.E02395' => 'egr', 'Eucgr.F01129' => 'egr', 'Eucgr.F02622' => 'egr', 'Eucgr.F04207' => 'egr', 'FAN01G0570' => 'fan', 'FAN03G3351' => 'fan', 'FAN06G3702' => 'fan', 'FAN07G2149' => 'fan', 'FAN10G3758' => 'fan', 'FAN11G1170' => 'fan', 'FAN11G2050' => 'fan', 'FAN11G2724' => 'fan', 'FAN12G1700' => 'fan', 'FAN12G2028' => 'fan', 'FAN15G1160' => 'fan', 'FAN15G3063' => 'fan', 'FAN16G2540' => 'fan', 'FAN16G3077' => 'fan', 'FAN16G3624' => 'fan', 'FAN17G0221' => 'fan', 'FAN20G2492' => 'fan', 'FAN20G2905' => 'fan', 'FAN21G0548' => 'fan', 'FAN21G1300' => 'fan', 'FAN22G0077' => 'fan', 'FAN22G1315' => 'fan', 'FAN24G1280' => 'fan', 'FAN24G1445' => 'fan', 'FAN24G3527' => 'fan', 'FAN25G0464' => 'fan', 'FAN25G2885' => 'fan', 'FAN25G3270' => 'fan', 'FAN27G1101' => 'fan', 'FAN27G2846' => 'fan', 'FAN27G3524' => 'fan', 'FvH4_2g11770' => 'fve', 'FvH4_2g15630' => 'fve', 'FvH4_3g05570' => 'fve', 'FvH4_3g09110' => 'fve', 'FvH4_3g19940' => 'fve', 'FvH4_4g04821' => 'fve', 'FvH4_4g31480' => 'fve', 'FvH4_7g01740' => 'fve', 'Glyma.05G130400' => 'gma', 'Glyma.05G156400' => 'gma', 'Glyma.07G197000' => 'gma', 'Glyma.08G085151' => 'gma', 'Glyma.08G114500' => 'gma', 'Glyma.08G300400' => 'gma', 'Glyma.10G215800' => 'gma', 'Glyma.12G224400' => 'gma', 'Glyma.13G179300' => 'gma', 'Glyma.13G218151' => 'gma', 'Glyma.13G238800' => 'gma', 'Glyma.13G276900' => 'gma', 'Glyma.14G078200' => 'gma', 'Glyma.15G074500' => 'gma', 'Glyma.15G094100' => 'gma', 'Glyma.17G247200' => 'gma', 'Glyma.18G120100' => 'gma', 'Glyma.20G176000' => 'gma', 'Gohir.A01G063600' => 'ghi', 'Gohir.A01G170301' => 'ghi', 'Gohir.A02G060500' => 'ghi', 'Gohir.A05G133850' => 'ghi', 'Gohir.A05G161400' => 'ghi', 'Gohir.A06G012900' => 'ghi', 'Gohir.A06G035901' => 'ghi', 'Gohir.A06G127100' => 'ghi', 'Gohir.A06G210500' => 'ghi', 'Gohir.A08G008650' => 'ghi', 'Gohir.A09G072700' => 'ghi', 'Gohir.A09G088301' => 'ghi', 'Gohir.A10G040600' => 'ghi', 'Gohir.A12G036300' => 'ghi', 'Gohir.A12G143350' => 'ghi', 'Gohir.A12G165500' => 'ghi', 'Gohir.A13G145700' => 'ghi', 'Gohir.D01G050000' => 'ghi', 'Gohir.D01G051366' => 'ghi', 'Gohir.D01G161350' => 'ghi', 'Gohir.D02G065900' => 'ghi', 'Gohir.D05G164200' => 'ghi', 'Gohir.D05G355500' => 'ghi', 'Gohir.D06G010400' => 'ghi', 'Gohir.D06G111250' => 'ghi', 'Gohir.D06G132000' => 'ghi', 'Gohir.D06G210500' => 'ghi', 'Gohir.D07G165675' => 'ghi', 'Gohir.D08G062240' => 'ghi', 'Gohir.D08G086101' => 'ghi', 'Gohir.D08G138060' => 'ghi', 'Gohir.D09G072300' => 'ghi', 'Gohir.D10G041400' => 'ghi', 'Gohir.D11G191020' => 'ghi', 'Gohir.D11G212066' => 'ghi', 'Gohir.D12G036300' => 'ghi', 'Gohir.D12G168600' => 'ghi', 'Gohir.D13G150600' => 'ghi', 'Gorai.001G057300' => 'gra', 'Gorai.002G069900' => 'gra', 'Gorai.002G200000' => 'gra', 'Gorai.003G067600' => 'gra', 'Gorai.005G074800' => 'gra', 'Gorai.006G087300' => 'gra', 'Gorai.008G037500' => 'gra', 'Gorai.008G181400' => 'gra', 'Gorai.009G169400' => 'gra', 'Gorai.009G387900' => 'gra', 'Gorai.010G013300' => 'gra', 'Gorai.010G153800' => 'gra', 'Gorai.010G255800' => 'gra', 'Gorai.011G043700' => 'gra', 'Gorai.011G198900' => 'gra', 'Gorai.013G168400' => 'gra', 'GSVIVG01005212001' => 'vvi', 'GSVIVG01006163001' => 'vvi', 'GSVIVG01009625001' => 'vvi', 'GSVIVG01014338001' => 'vvi', 'GSVIVG01020005001' => 'vvi', 'GSVIVG01021450001' => 'vvi', 'GSVIVG01023975001' => 'vvi', 'GSVIVG01034490001' => 'vvi', 'HanXRQChr04g0112071' => 'han', 'HanXRQChr05g0131151' => 'han', 'HanXRQChr09g0262371' => 'han', 'HanXRQChr09g0268401' => 'han', 'HanXRQChr10g0279241' => 'han', 'HanXRQChr10g0297961' => 'han', 'HanXRQChr11g0326231' => 'han', 'HanXRQChr11g0328471' => 'han', 'HanXRQChr16g0507941' => 'han', 'HanXRQChr17g0560211' => 'han', 'Haze_02108' => 'cav', 'Haze_02428' => 'cav', 'Haze_05593' => 'cav', 'Haze_06448' => 'cav', 'Haze_09427' => 'cav', 'Haze_12022' => 'cav', 'Haze_17612' => 'cav', 'Haze_17928' => 'cav', 'Hma1.2p1_0032F.1_g019250' => 'hma', 'Hma1.2p1_0163F.1_g072690' => 'hma', 'Hma1.2p1_0265F.1_g106710' => 'hma', 'Hma1.2p1_0286F.1_g113970' => 'hma', 'Hma1.2p1_0363F.1_g136640' => 'hma', 'Hma1.2p1_0584F.1_g183470' => 'hma', 'Hma1.2p1_0885F.1_g232570' => 'hma', 'HPP92_006022' => 'vpl', 'HPP92_007320' => 'vpl', 'HPP92_011521' => 'vpl', 'HPP92_019387' => 'vpl', 'HPP92_024038' => 'vpl', 'Hund05891' => 'sun', 'Hund06450' => 'sun', 'Hund12053' => 'sun', 'Hund16800' => 'sun', 'Hund21222' => 'sun', 'Hund22896' => 'sun', 'Hund23746' => 'sun', 'Hund27083' => 'sun', 'Lalb_Chr02g0141831' => 'lal', 'Lalb_Chr02g0141841' => 'lal', 'Lalb_Chr05g0220411' => 'lal', 'Lalb_Chr06g0162081' => 'lal', 'Lalb_Chr09g0327651' => 'lal', 'Lalb_Chr13g0295051' => 'lal', 'Lalb_Chr15g0086801' => 'lal', 'Lalb_Chr16g0383781' => 'lal', 'Lalb_Chr16g0383791' => 'lal', 'Lalb_Chr18g0055441' => 'lal', 'Lalb_Chr18g0059611' => 'lal', 'Lalb_Chr20g0109661' => 'lal', 'Lalb_Chr20g0109831' => 'lal', 'Lalb_Chr20g0121871' => 'lal', 'Lalb_Chr22g0355361' => 'lal', 'Lalb_Chr25g0286371' => 'lal', 'Lj1A1187G43' => 'lonja', 'Lj1A1205T50' => 'lonja', 'Lj1A800G33' => 'lonja', 'Lj1C1187T7' => 'lonja', 'Lj1C843T11' => 'lonja', 'Lj1g0010940' => 'lja', 'Lj2A288T69' => 'lonja', 'Lj3g0024276' => 'lja', 'Lj4A47T76' => 'lonja', 'Lj4g0005805' => 'lja', 'Lj4g0006097' => 'lja', 'Lj4g0008528' => 'lja', 'Lj4g0024907' => 'lja', 'Lj5g0012472' => 'lja', 'Lj5g0018648' => 'lja', 'Lj6C789G1' => 'lonja', 'Lj6g0004000' => 'lja', 'Lj7A292G67' => 'lonja', 'Lj7A292T64' => 'lonja', 'Lj9A400T58' => 'lonja', 'Lsat_1_v5_gn_1_126181' => 'lsa', 'Lsat_1_v5_gn_4_123041' => 'lsa', 'Lsat_1_v5_gn_4_133620' => 'lsa', 'Lsat_1_v5_gn_4_53221' => 'lsa', 'Lsat_1_v5_gn_4_71961' => 'lsa', 'Lsat_1_v5_gn_7_105241' => 'lsa', 'Lsat_1_v5_gn_7_21361' => 'lsa', 'Lsat_1_v5_gn_7_28860' => 'lsa', 'Lsat_1_v5_gn_7_31260' => 'lsa', 'Lsat_1_v5_gn_8_52801' => 'lsa', 'Manes.02G191400' => 'mes', 'Manes.03G110100' => 'mes', 'Manes.04G071100' => 'mes', 'Manes.05G100500' => 'mes', 'Manes.05G164700' => 'mes', 'Manes.15G087000' => 'mes', 'Manes.15G121500' => 'mes', 'Manes.16G028300' => 'mes', 'Manes.17G046100' => 'mes', 'Manes.17G069800' => 'mes', 'Manes.18G100500' => 'mes', 'Mapoly0002s0109' => 'mpo', 'Mapoly0024s0007' => 'mpo', 'Mapoly0089s0032' => 'mpo', 'MBI04_g42241_MAGBIO' => 'mbi', 'MBI05_g11988_MAGBIO' => 'mbi', 'MBI05_g35452_MAGBIO' => 'mbi', 'MBI07_g30179_MAGBIO' => 'mbi', 'MBI07_g35859_MAGBIO' => 'mbi', 'MBI07_g35860_MAGBIO' => 'mbi', 'MBI07_g37166_MAGBIO' => 'mbi', 'MBI08_g18172_MAGBIO' => 'mbi', 'MBI09_g08441_MAGBIO' => 'mbi', 'MBI13_g01676_MAGBIO' => 'mbi', 'MBI14_g42955_MAGBIO' => 'mbi', 'MBI16_g13161_MAGBIO' => 'mbi', 'MBI17_g27204_MAGBIO' => 'mbi', 'MBI19_g21595_MAGBIO' => 'mbi', 'MD00G1148400' => 'mdo', 'MD02G1301200' => 'mdo', 'MD03G1227800' => 'mdo', 'MD05G1041100' => 'mdo', 'MD05G1124800' => 'mdo', 'MD05G1284000' => 'mdo', 'MD05G1338800' => 'mdo', 'MD05G1338900' => 'mdo', 'MD07G1022800' => 'mdo', 'MD10G1047500' => 'mdo', 'MD10G1127500' => 'mdo', 'MD10G1262300' => 'mdo', 'MD10G1293800' => 'mdo', 'MD16G1074300' => 'mdo', 'Medtr1g021670' => 'mtr', 'Medtr1g096320' => 'mtr', 'Medtr2g013690' => 'mtr', 'Medtr2g019450' => 'mtr', 'Medtr2g085170' => 'mtr', 'Medtr4g088785' => 'mtr', 'Medtr8g055930' => 'mtr', 'Medtr8g085850' => 'mtr', 'MELO3C002605.2' => 'cme', 'MELO3C003891.2' => 'cme', 'MELO3C004012.2' => 'cme', 'MELO3C007134.2' => 'cme', 'MELO3C008118.2' => 'cme', 'MELO3C016700.2' => 'cme', 'MELO3C024127.2' => 'cme', 'MELO3C033361.2' => 'cme', 'MELO3C033362.2' => 'cme', 'Migut.C00430' => 'egut', 'Migut.C01246' => 'egut', 'Migut.E00101' => 'egut', 'Migut.H01486' => 'egut', 'Migut.H01939' => 'egut', 'Migut.K00360' => 'egut', 'Migut.M00910' => 'egut', 'Migut.M01139' => 'egut', 'Migut.N02677' => 'egut', 'MSTRG.13252' => 'ama', 'MSTRG.14701' => 'ama', 'MSTRG.1521' => 'ama', 'MSTRG.15884' => 'ama', 'MSTRG.16242' => 'ama', 'MSTRG.22285' => 'ama', 'MSTRG.22444' => 'ama', 'MSTRG.2349' => 'ama', 'MSTRG.26308' => 'ama', 'MSTRG.28296' => 'ama', 'MSTRG.9895' => 'ama', 'Nitab4.5_0000110g0060' => 'nta', 'Nitab4.5_0000420g0130' => 'nta', 'Nitab4.5_0000422g0030' => 'nta', 'Nitab4.5_0000560g0180' => 'nta', 'Nitab4.5_0000703g0100' => 'nta', 'Nitab4.5_0000786g0200' => 'nta', 'Nitab4.5_0001336g0020' => 'nta', 'Nitab4.5_0001796g0030' => 'nta', 'Nitab4.5_0003348g0060' => 'nta', 'Nitab4.5_0003698g0040' => 'nta', 'Nitab4.5_0003942g0090' => 'nta', 'Nitab4.5_0004775g0070' => 'nta', 'Nitab4.5_0004864g0030' => 'nta', 'Nitab4.5_0005615g0020' => 'nta', 'Nitab4.5_0009288g0030' => 'nta', 'Nitab4.5_0009341g0010' => 'nta', 'Nitab4.5_0009535g0010' => 'nta', 'Nn1g03995' => 'nnu', 'Nn1g04100' => 'nnu', 'Nn1g06530' => 'nnu', 'Nn3g16404' => 'nnu', 'Nn3g17212' => 'nnu', 'Nn3g20776' => 'nnu', 'Nn3g21923' => 'nnu', 'Nn5g27737' => 'nnu', 'Nn5g29461' => 'nnu', 'Nn7g38355' => 'nnu', 'Nn8g39873' => 'nnu', 'Oeu000548.2' => 'oeu', 'Oeu004672.1' => 'oeu', 'Oeu015605.2' => 'oeu', 'Oeu016092.1' => 'oeu', 'Oeu017879.3' => 'oeu', 'Oeu024910.1' => 'oeu', 'Oeu028965.1' => 'oeu', 'Oeu031269.1' => 'oeu', 'Oeu031270.1' => 'oeu', 'Oeu032535.1' => 'oeu', 'Oeu034151.1' => 'oeu', 'Oeu034152.1' => 'oeu', 'Oeu034588.2' => 'oeu', 'Oeu050846.1' => 'oeu', 'Oeu050849.2' => 'oeu', 'Oeu051063.2' => 'oeu', 'Oeu052368.1' => 'oeu', 'Oeu052370.1' => 'oeu', 'Os01g0210400' => 'osa', 'Os01g0304300' => 'osa', 'Os01g0749100' => 'osa', 'Os02g0745800' => 'osa', 'Os03g0769050' => 'osa', 'Os05g0531500' => 'osa', 'Os06g0724300' => 'osa', 'Os11g0198100' => 'osa', 'Peaxi162Scf00069g01425' => 'pax', 'Peaxi162Scf00280g00811' => 'pax', 'Peaxi162Scf00310g00615' => 'pax', 'Peaxi162Scf00362g00542' => 'pax', 'Peaxi162Scf00461g00310' => 'pax', 'Peaxi162Scf00530g00118' => 'pax', 'Peaxi162Scf00541g00057' => 'pax', 'Peaxi162Scf00661g00017' => 'pax', 'Peaxi162Scf00926g00027' => 'pax', 'Peaxi162Scf01064g00263' => 'pax', 'Peaxi162Scf01211g00135' => 'pax', 'PGR004G2336' => 'pgr', 'PGR042G0327' => 'pgr', 'PGR042G1957' => 'pgr', 'PGR042G2003' => 'pgr', 'PGR042G3929' => 'pgr', 'PGR083G1137' => 'pgr', 'PGR083G1364' => 'pgr', 'PGSC0003DMG400003381' => 'stu', 'PGSC0003DMG400003417' => 'stu', 'PGSC0003DMG400008981' => 'stu', 'PGSC0003DMG400012417' => 'stu', 'PGSC0003DMG400012823' => 'stu', 'PGSC0003DMG400016885' => 'stu', 'PGSC0003DMG400022812' => 'stu', 'PGSC0003DMG400029726' => 'stu', 'PGSC0003DMG401009243' => 'stu', 'PGSC0003DMG401031505' => 'stu', 'PGSC0003DMG402031505' => 'stu', 'Phvul.001G017600' => 'pvu', 'Phvul.002G193500' => 'pvu', 'Phvul.002G228900' => 'pvu', 'Phvul.002G236800' => 'pvu', 'Phvul.003G049500' => 'pvu', 'Phvul.005G072000' => 'pvu', 'Phvul.006G164800' => 'pvu', 'Phvul.006G185100' => 'pvu', 'Phvul.007G090000' => 'pvu', 'Potri.001G399800' => 'ptr', 'Potri.002G149900' => 'ptr', 'Potri.004G044100' => 'ptr', 'Potri.004G177600' => 'ptr', 'Potri.009G138000' => 'ptr', 'Potri.010G094000' => 'ptr', 'Potri.011G053000' => 'ptr', 'Potri.011G119300' => 'ptr', 'Potri.013G113700' => 'ptr', 'Potri.018G107800' => 'ptr', 'Potri.019G084100' => 'ptr', 'Pp3c14_23720' => 'ppa', 'Pp3c16_6340' => 'ppa', 'Pp3c23_13420' => 'ppa', 'Pp3c24_2740' => 'ppa', 'Pp3c25_860' => 'ppa', 'Pp3c8_21750' => 'ppa', 'Prupe.1G273000' => 'ppe', 'Prupe.1G273700' => 'ppe', 'Prupe.1G274100' => 'ppe', 'Prupe.2G023300' => 'ppe', 'Prupe.4G048000' => 'ppe', 'Prupe.4G080400' => 'ppe', 'Prupe.4G181200' => 'ppe', 'Prupe.8G056900' => 'ppe', 'Prupe.8G168700' => 'ppe', 'Psat1g189080' => 'psa', 'Psat1g204760' => 'psa', 'Psat4g175560' => 'psa', 'Psat4g177720' => 'psa', 'Psat5g244240' => 'psa', 'Psat6g010720' => 'psa', 'Psat6g187200' => 'psa', 'Psat7g072040' => 'psa', 'PSO017G3501' => 'pso', 'PSO063G2148' => 'pso', 'PSO063G5608' => 'pso', 'PSO210G6392' => 'pso', 'PSO541G2319' => 'pso', 'PSO541G2836' => 'pso', 'PSO541G4012' => 'pso', 'PSO541G6253' => 'pso', 'PSO675G0580' => 'pso', 'PSO675G0856' => 'pso', 'PSO675G5635' => 'pso', 'PSO675G9157' => 'pso', 'PSO832G1660' => 'pso', 'PSO832G1969' => 'pso', 'QL02p007186' => 'qlo', 'QL02p033904' => 'qlo', 'QL03p064391' => 'qlo', 'QL05p040593' => 'qlo', 'QL05p058242' => 'qlo', 'QL08p021825' => 'qlo', 'QL11p004981' => 'qlo', 'RcHm_v2.0_Chr1g0318301' => 'rch', 'RcHm_v2.0_Chr4g0418501' => 'rch', 'RcHm_v2.0_Chr4g0439971' => 'rch', 'RcHm_v2.0_Chr5g0008541' => 'rch', 'RcHm_v2.0_Chr5g0014101' => 'rch', 'RcHm_v2.0_Chr5g0014131' => 'rch', 'RcHm_v2.0_Chr5g0033621' => 'rch', 'RcHm_v2.0_Chr6g0272041' => 'rch', 'RcHm_v2.0_Chr6g0278831' => 'rch', 'Rhsim02G0130400' => 'rsi', 'Rhsim02G0171100' => 'rsi', 'Rhsim05G0053000' => 'rsi', 'Rhsim05G0053100' => 'rsi', 'Rhsim06G0096500' => 'rsi', 'Rhsim06G0096600' => 'rsi', 'Rhsim06G0199100' => 'rsi', 'Rhsim12G0062300' => 'rsi', 'Rhsim12G0062800' => 'rsi', 'Sabra02G0118600' => 'sbr', 'Sabra04G0027300' => 'sbr', 'Sabra04G0119500' => 'sbr', 'Sabra08G0112500' => 'sbr', 'Sabra11G0036800' => 'sbr', 'Sabra11G0103800' => 'sbr', 'Sabra13G0096300' => 'sbr', 'Sabra16G0262300' => 'sbr', 'Sabra18G0091700' => 'sbr', 'Sabra19G0095400' => 'sbr', 'SalBow6G3080' => 'sbo', 'SalBow7G1157' => 'sbo', 'SalBow7G2123' => 'sbo', 'SalBow7G2285' => 'sbo', 'SalBow7G3537' => 'sbo', 'SalBow8G2947' => 'sbo', 'SalBow8G4463' => 'sbo', 'SalBow8G5466' => 'sbo', 'Sc01g0001750' => 'sci', 'Sc02g0006640' => 'sci', 'Sc02g0006670' => 'sci', 'Sc04g0008220' => 'sci', 'Sc05g0006190' => 'sci', 'Sc08g0002760' => 'sci', 'Sc17g0006170' => 'sci', 'Sc22g0002050' => 'sci', 'Sc23g0001190' => 'sci', 'Sc24g0000980' => 'sci', 'Sed0006245' => 'sed', 'Sed0007543' => 'sed', 'Sed0009411' => 'sed', 'Sed0010765' => 'sed', 'Sed0012944' => 'sed', 'Sed0014682' => 'sed', 'Sed0016174' => 'sed', 'Sed0016796' => 'sed', 'Sed0020317' => 'sed', 'Sed0021467' => 'sed', 'SEGI_01316' => 'sgi', 'SEGI_03374' => 'sgi', 'SEGI_16265' => 'sgi', 'SEGI_18569' => 'sgi', 'SEGI_20351' => 'sgi', 'SEGI_26395' => 'sgi', 'SEGI_29469' => 'sgi', 'SEGI_34771' => 'sgi', 'SEGI_36769' => 'sgi', 'SEGI_37139' => 'sgi', 'SGA_v2.0_scaffold100G29687' => 'sas', 'SGA_v2.0_scaffold118G32472' => 'sas', 'SGA_v2.0_scaffold14G07051' => 'sas', 'SGA_v2.0_scaffold183G39845' => 'sas', 'SGA_v2.0_scaffold1G00174' => 'sas', 'SGA_v2.0_scaffold22G09714' => 'sas', 'SGA_v2.0_scaffold333G48992' => 'sas', 'SGA_v2.0_scaffold46G17491' => 'sas', 'SGA_v2.0_scaffold49G18294' => 'sas', 'SGA_v2.0_scaffold63G21658' => 'sas', 'SHI01741' => 'shi', 'SHI05771' => 'shi', 'SHI18077' => 'shi', 'SHI20525' => 'shi', 'SHI20527' => 'shi', 'SHI20528' => 'shi', 'SMO172G0185' => 'smo', 'SMO198G0020' => 'smo', 'SMO351G0006' => 'smo', 'SMO356G0118' => 'smo', 'SMO358G0296' => 'smo', 'SMO367G0079' => 'smo', 'SMO367G1277' => 'smo', 'Solyc01g014220.3' => 'sly', 'Solyc01g111770.2' => 'sly', 'Solyc02g078180.3' => 'sly', 'Solyc03g006430.3' => 'sly', 'Solyc03g006456.1' => 'sly', 'Solyc03g079860.2' => 'sly', 'Solyc04g079770.3' => 'sly', 'Solyc05g007430.4' => 'sly', 'Solyc07g063150.3' => 'sly', 'Solyc08g016620.3' => 'sly', 'Solyc09g057590.3' => 'sly', 'Solyc09g057600.1' => 'sly', 'Solyc10g009050.3' => 'sly', 'Solyc11g017420.2' => 'sly', 'Sopen01g053810' => 'spe', 'Sopen02g023040' => 'spe', 'Sopen03g002440' => 'spe', 'Sopen04g033350' => 'spe', 'Sopen05g003310' => 'spe', 'Sopen07g004050' => 'spe', 'Sopen07g031340' => 'spe', 'Sopen08g006990' => 'spe', 'Sopen10g004830' => 'spe', 'Sopen11g009370' => 'spe', 'Sp1g24450' => 'spa', 'Sp1g29670' => 'spa', 'Sp1g39600' => 'spa', 'Sp2g11080' => 'spa', 'Sp2g13970' => 'spa', 'Sp4g16130' => 'spa', 'Sp6g13080' => 'spa', 'Sp7g37270' => 'spa', 'TAR371G0065' => 'tar', 'TAR376G0340' => 'tar', 'TAR376G0435' => 'tar', 'TAR381G0002' => 'tar', 'TAR381G1236' => 'tar', 'TAR624G0055' => 'tar', 'TAR624G0324' => 'tar', 'TAR624G0696' => 'tar', 'TAR624G0906' => 'tar', 'TAR625G0107' => 'tar', 'TAR626G0015' => 'tar', 'TAR626G1356' => 'tar', 'TAR627G0888' => 'tar', 'TAR628G0399' => 'tar', 'TAR628G1327' => 'tar', 'TAR629G2831' => 'tar', 'TAR629G2874' => 'tar', 'TAR633G1432' => 'tar', 'TAR633G2771' => 'tar', 'THA.LOC104803394' => 'tha', 'THA.LOC104805153' => 'tha', 'THA.LOC104806784' => 'tha', 'THA.LOC104810473' => 'tha', 'THA.LOC104813100' => 'tha', 'THA.LOC104814215' => 'tha', 'THA.LOC104815554' => 'tha', 'THA.LOC104820544' => 'tha', 'THA.LOC104824754' => 'tha', 'THA.LOC104827717' => 'tha', 'Thecc.02G031400' => 'tca', 'Thecc.02G055900' => 'tca', 'Thecc.02G350800' => 'tca', 'Thecc.06G150900' => 'tca', 'Thecc.06G186600' => 'tca', 'Thecc.07G089600' => 'tca', 'Thecc.08G020400' => 'tca', 'Thecc.08G182100' => 'tca', 'Thhalv10000873m.g' => 'esa', 'Thhalv10004185m.g' => 'esa', 'Thhalv10006981m.g' => 'esa', 'Thhalv10007204m.g' => 'esa', 'Thhalv10011374m.g' => 'esa', 'Thhalv10013482m.g' => 'esa', 'Thhalv10017801m.g' => 'esa', 'Thhalv10024983m.g' => 'esa', 'TPR.G12072' => 'tpr', 'TPR.G15769' => 'tpr', 'TPR.G16504' => 'tpr', 'TPR.G16506' => 'tpr', 'TPR.G24345' => 'tpr', 'TPR.G26666' => 'tpr', 'TPR.G27320' => 'tpr', 'TPR.G31819' => 'tpr', 'TPR.G38879' => 'tpr', 'TPR.G39015' => 'tpr', 'TPR.G8819' => 'tpr', 'TWI09G0924' => 'twi', 'TWI12G0811' => 'twi', 'TWI12G1294' => 'twi', 'TWI31G0150' => 'twi', 'TWI36G1262' => 'twi', 'TWI38G1287' => 'twi', 'TWI38G1633' => 'twi', 'TWI38G1982' => 'twi', 'TWI39G0116' => 'twi', 'TWI60G1011' => 'twi', 'TWI63G0171' => 'twi', 'TWI73G0839' => 'twi', 'TWI79G1511' => 'twi', 'unitig_0.g915' => 'ugi', 'unitig_0.g916' => 'ugi', 'unitig_21.g20219' => 'ugi', 'unitig_21.g20416' => 'ugi', 'unitig_578.g16132' => 'ugi', 'unitig_578.g16718' => 'ugi', 'unitig_62.g23481' => 'ugi', 'unitig_744.g24535' => 'ugi', 'unitig_749.g13525' => 'ugi', 'vmacro01248' => 'vma', 'vmacro02290' => 'vma', 'vmacro10946' => 'vma', 'vmacro11865' => 'vma', 'vmacro12493' => 'vma', 'vmacro17322' => 'vma', 'vmacro21599' => 'vma', 'vmacro23041' => 'vma', 'VMungo0251G0004' => 'vmu', 'VMungo0251G2639' => 'vmu', 'VMungo0251G2967' => 'vmu', 'VMungo0540G0864' => 'vmu', 'VMungo0540G1569' => 'vmu', 'VMungo0647G0317' => 'vmu', 'VMungo0720G1373' => 'vmu', 'VMungo0720G1508' => 'vmu', 'VMungo1080G0485' => 'vmu', 'VMungo1215G3177' => 'vmu', 'Zm00001eb112600' => 'zma', 'Zm00001eb120220' => 'zma', 'Zm00001eb153240' => 'zma', 'Zm00001eb168880' => 'zma', 'Zm00001eb213920' => 'zma', 'Zm00001eb228280' => 'zma', 'Zm00001eb254580' => 'zma', 'Zm00001eb272180' => 'zma', 'Zm00001eb293190' => 'zma', 'Zm00001eb322930' => 'zma', 'Zm00001eb353360' => 'zma', 'Zm00001eb353390' => 'zma', 'Zm00001eb353430' => 'zma', 'Zm00001eb353440' => 'zma', 'Zm00001eb353780' => 'zma' ) $gf_id = 'HOM05D000499' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000499' ) $data_identifier = 'HOM05D000499' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 29, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 12, 'amhyb' => (int) 8, 'aly' => (int) 12, 'aox' => (int) 9, 'arhy' => (int) 26, 'ath' => (int) 8, 'atr' => (int) 7, 'acertr' => (int) 10, 'cqu' => (int) 15, 'bca' => (int) 29, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 11, 'cansat' => (int) 8, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 9, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 8, 'cpa' => (int) 10, 'csa' => (int) 7, 'camsi' => (int) 20, 'dca' => (int) 8, 'din' => (int) 12, 'dzi' => (int) 14, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 6, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 38, 'gra' => (int) 16, 'vvi' => (int) 8, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 5, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 11, 'lja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 11, 'mpo' => (int) 3, 'mbi' => (int) 14, 'mdo' => (int) 14, 'mtr' => (int) 8, 'cme' => (int) 9, 'egut' => (int) 9, 'ama' => (int) 11, 'nta' => (int) 17, 'nnu' => (int) 11, 'oeu' => (int) 18, 'osa' => (int) 8, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 6, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 9, 'rsi' => (int) 9, 'sbr' => (int) 10, 'sbo' => (int) 8, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 10, 'sas' => (int) 10, 'shi' => (int) 6, 'smo' => (int) 7, 'sly' => (int) 14, 'spe' => (int) 10, 'spa' => (int) 8, 'tar' => (int) 19, 'tha' => (int) 10, 'tca' => (int) 8, 'esa' => (int) 8, 'tpr' => (int) 11, 'twi' => (int) 13, 'ugi' => (int) 9, 'vma' => (int) 8, 'vmu' => (int) 10, 'zma' => (int) 15 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb353780' $species_info = array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ) $local_species = 'cil' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000499', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1066', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p29780' => 'bna', 'A02p33180' => 'bna', 'A03p16470' => 'bna', 'A03p66010' => 'bna', 'A04p25970' => 'bna', 'A06p01270' => 'bna', 'A06p46080' => 'bna', 'A07p11400' => 'bna', 'A08p01840' => 'bna', 'A08p08230' => 'bna', 'A08p25740' => 'bna', 'A09p32070' => 'bna', 'A09p37830' => 'bna', 'A09p42840' => 'bna', 'A09p42850' => 'bna', 'Aa31LG10G2060' => 'aar', 'Aa31LG2G7410' => 'aar', 'Aa31LG6G10200' => 'aar', 'Aa31LG6G16680' => 'aar', 'Aa31LG6G8470' => 'aar', 'Aa31LG9G12730' => 'aar', 'Aa31LG9G13680' => 'aar', 'Aa31LG9G14920' => 'aar', 'Aa31LG9G6650' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4977' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5467' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3254' => 'aag', 'Actinidia02578' => 'ach', 'Actinidia07693' => 'ach', 'Actinidia08413' => 'ach', 'Actinidia08414' => 'ach', 'Actinidia15289' => 'ach', 'Actinidia19871' => 'ach', 'Actinidia21475' => 'ach', 'Actinidia22576' => 'ach', 'Actinidia28327' => 'ach', 'Actinidia32491' => 'ach', 'Actinidia39463' => 'ach', 'Actinidia39571' => 'ach', 'Ah.01g013750' => 'amhyb', 'Ah.01g023210' => 'amhyb', 'Ah.04g164850' => 'amhyb', 'Ah.05g178060' => 'amhyb', 'Ah.07g204270' => 'amhyb', 'Ah.07g208480' => 'amhyb', 'Ah.09g237410' => 'amhyb', 'Ah.14g089460' => 'amhyb', 'AL1G41790' => 'aly', 'AL1G49050' => 'aly', 'AL1G53810' => 'aly', 'AL1G61400' => 'aly', 'AL4G18580' => 'aly', 'AL5G12510' => 'aly', 'AL5G12540' => 'aly', 'AL6G43230' => 'aly', 'AL7G10370' => 'aly', 'AL7G19250' => 'aly', 'AL8G12240' => 'aly', 'AL8G18540' => 'aly', 'Aqoxy1G02409' => 'aox', 'Aqoxy2G03993' => 'aox', 'Aqoxy3G03357' => 'aox', 'Aqoxy4G00785' => 'aox', 'Aqoxy5G02598' => 'aox', 'Aqoxy6G00132' => 'aox', 'Aqoxy7G01776' => 'aox', 'Aqoxy7G02316' => 'aox', 'Aqoxy7G03973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.12AFKW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B8730' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27IQR1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3F75VG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3RE0GA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41TCQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.527VTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FIR39' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5W8UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DA38EV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ63HS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H1I32C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HC27T5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4M8AP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7N3CZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9UVDZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LS1NQA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT1D4B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SKC4TM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCFV76' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF9Q1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQWD9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1ZM88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WE07RT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YCK7VH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJE6Q6' => 'arhy', 'AT1G28240' => 'ath', 'AT1G34550' => 'ath', 'AT1G53040' => 'ath', 'AT2G02910' => 'ath', 'AT4G09630' => 'ath', 'AT4G38500' => 'ath', 'AT5G42660' => 'ath', 'AT5G46220' => 'ath', 'ATR0152G026' => 'atr', 'ATR0564G343' => 'atr', 'ATR0706G151' => 'atr', 'ATR0733G207' => 'atr', 'ATR0751G234' => 'atr', 'ATR0807G048' => 'atr', 'ATR1091G084' => 'atr', 'Atru.chr10.1229' => 'acertr', 'Atru.chr10.1230' => 'acertr', 'Atru.chr10.1874' => 'acertr', 'Atru.chr11.1808' => 'acertr', 'Atru.chr13.1795' => 'acertr', 'Atru.chr13.570' => 'acertr', 'Atru.chr2.2608' => 'acertr', 'Atru.chr2.2609' => 'acertr', 'Atru.chr5.3428' => 'acertr', 'Atru.chr8.1171' => 'acertr', 'AUR62004651' => 'cqu', 'AUR62008675' => 'cqu', 'AUR62010014' => 'cqu', 'AUR62013004' => 'cqu', 'AUR62014825' => 'cqu', 'AUR62015015' => 'cqu', 'AUR62015151' => 'cqu', 'AUR62017020' => 'cqu', 'AUR62019422' => 'cqu', 'AUR62023570' => 'cqu', 'AUR62025571' => 'cqu', 'AUR62029098' => 'cqu', 'AUR62033863' => 'cqu', 'AUR62034296' => 'cqu', 'AUR62040075' => 'cqu', 'BcaB02g07334' => 'bca', 'BcaB02g10575' => 'bca', 'BcaB03g12119' => 'bca', 'BcaB03g12120' => 'bca', 'BcaB03g13945' => 'bca', 'BcaB04g17123' => 'bca', 'BcaB04g17867' => 'bca', 'BcaB04g19839' => 'bca', 'BcaB07g30317' => 'bca', 'BcaB07g32432' => 'bca', 'BcaB07g33362' => 'bca', 'BcaB08g36611' => 'bca', 'BcaC01g00028' => 'bca', 'BcaC01g01356' => 'bca', 'BcaC01g02034' => 'bca', 'BcaC01g06051' => 'bca', 'BcaC03g16839' => 'bca', 'BcaC03g17176' => 'bca', 'BcaC05g26829' => 'bca', 'BcaC06g31490' => 'bca', 'BcaC06g35344' => 'bca', 'BcaC06g36570' => 'bca', 'BcaC07g37537' => 'bca', 'BcaC08g43491' => 'bca', 'BcaC08g43773' => 'bca', 'BcaNung00234' => 'bca', 'BcaNung01982' => 'bca', 'BcaNung03707' => 'bca', 'BcaNung06454' => 'bca', 'BolC2t10762H' => 'bol', 'BolC2t11191H' => 'bol', 'BolC3t14322H' => 'bol', 'BolC3t19747H' => 'bol', 'BolC3t21425H' => 'bol', 'BolC4t27800H' => 'bol', 'BolC5t31423H' => 'bol', 'BolC6t35951H' => 'bol', 'BolC6t36282H' => 'bol', 'BolC7t40678H' => 'bol', 'BolC7t40679H' => 'bol', 'BolC7t42222H' => 'bol', 'BolC7t43492H' => 'bol', 'BolC7t46785H' => 'bol', 'BolC8t47853H' => 'bol', 'BolC9t56805H' => 'bol', 'BraA02t08000Z' => 'bra', 'BraA02t08341Z' => 'bra', 'BraA03t10936Z' => 'bra', 'BraA03t15657Z' => 'bra', 'BraA04t18100Z' => 'bra', 'BraA05t20523Z' => 'bra', 'BraA06t23353Z' => 'bra', 'BraA06t27473Z' => 'bra', 'BraA06t27769Z' => 'bra', 'BraA07t28928Z' => 'bra', 'BraA08t32236Z' => 'bra', 'BraA08t32841Z' => 'bra', 'BraA08t34524Z' => 'bra', 'BraA09t38742Z' => 'bra', 'BraA09t39295Z' => 'bra', 'C02p47180' => 'bna', 'C02p50990' => 'bna', 'C03p19360' => 'bna', 'C03p74950' => 'bna', 'C03p91000' => 'bna', 'C04p63260' => 'bna', 'C05p27050' => 'bna', 'C06p08750' => 'bna', 'C06p11490' => 'bna', 'C07p02820' => 'bna', 'C07p17180' => 'bna', 'C07p29440' => 'bna', 'C07p63730' => 'bna', 'C09p39260' => 'bna', 'CAN.G1164.34' => 'can', 'CAN.G1164.39' => 'can', 'CAN.G1530.3' => 'can', 'CAN.G162.61' => 'can', 'CAN.G176.6' => 'can', 'CAN.G289.49' => 'can', 'CAN.G370.21' => 'can', 'CAN.G370.22' => 'can', 'CAN.G371.117' => 'can', 'CAN.G58.37' => 'can', 'CAN.G588.98' => 'can', 'CANSAT21G2266' => 'cansat', 'CANSAT25G2799' => 'cansat', 'CANSAT35G0862' => 'cansat', 'CANSAT35G1704' => 'cansat', 'CANSAT35G1760' => 'cansat', 'CANSAT56G3971' => 'cansat', 'CANSAT56G4116' => 'cansat', 'CANSAT80G1259' => 'cansat', 'CARHR027730' => 'chi', 'CARHR033880' => 'chi', 'CARHR043270' => 'chi', 'CARHR145330' => 'chi', 'CARHR145340' => 'chi', 'CARHR175570' => 'chi', 'CARHR181570' => 'chi', 'CARHR258470' => 'chi', 'CARHR260490' => 'chi', 'CARHR294220' => 'chi', 'Carub.0001s2668' => 'cru', 'Carub.0001s3257' => 'cru', 'Carub.0001s4220' => 'cru', 'Carub.0005s0179' => 'cru', 'Carub.0006s2807' => 'cru', 'Carub.0007s0039' => 'cru', 'Carub.0008s0169' => 'cru', 'Carub.0008s0636' => 'cru', 'Ca_00338_v3' => 'car', 'Ca_00542_v3' => 'car', 'Ca_01844_v3' => 'car', 'Ca_10611_v3' => 'car', 'Ca_13326_v3' => 'car', 'Ca_17944_v3' => 'car', 'Ca_18546_v3' => 'car', 'Ca_24219_v3' => 'car', 'Ca_29972_v3' => 'car', 'CBR_g3681' => 'cbr', 'CBR_g40021' => 'cbr', 'Cc01_g08140' => 'ccan', 'Cc02_g13410' => 'ccan', 'Cc02_g37480' => 'ccan', 'Cc05_g12030' => 'ccan', 'Cc09_g03370' => 'ccan', 'Cc09_g10300' => 'ccan', 'Cc10_g03530' => 'ccan', 'Cc10_g11380' => 'ccan', 'CDE01G0176' => 'cde', 'CDE02G0675' => 'cde', 'CDE02G0942' => 'cde', 'CDE02G1153' => 'cde', 'CDE02G4177' => 'cde', 'CDE04G2117' => 'cde', 'CDE04G2736' => 'cde', 'CDE08G1161' => 'cde', 'CDE09G1238' => 'cde', 'Cfa000467' => 'cfa', 'Cfa000947' => 'cfa', 'Cfa004969' => 'cfa', 'Cfa005284' => 'cfa', 'Cfa008993' => 'cfa', 'Cfa018187' => 'cfa', 'Cfa018454' => 'cfa', 'Cfa020585' => 'cfa', 'Ciclev10000424m.g' => 'ccl', 'Ciclev10003605m.g' => 'ccl', 'Ciclev10007828m.g' => 'ccl', 'Ciclev10014620m.g' => 'ccl', 'Ciclev10015169m.g' => 'ccl', 'Ciclev10018291m.g' => 'ccl', 'Ciclev10028256m.g' => 'ccl', 'Ciclev10033822m.g' => 'ccl', 'CiPaw.05G060300' => 'cil', 'CiPaw.05G085000' => 'cil', 'CiPaw.06G083700' => 'cil', 'CiPaw.06G120300' => 'cil', 'CiPaw.09G060500' => 'cil', 'CiPaw.09G123800' => 'cil', 'CiPaw.11G169700' => 'cil', 'CiPaw.12G118300' => 'cil', 'CiPaw.15G071000' => 'cil', 'CiPaw.15G081900' => 'cil', 'ClCG01G024610' => 'cla', 'ClCG03G006070' => 'cla', 'ClCG05G019250' => 'cla', 'ClCG09G009500' => 'cla', 'ClCG11G008200' => 'cla', 'ClCG11G018080' => 'cla', 'COL.COLO4_17373' => 'col', 'COL.COLO4_22994' => 'col', 'COL.COLO4_26389' => 'col', 'COL.COLO4_27170' => 'col', 'COL.COLO4_31074' => 'col', 'COL.COLO4_31465' => 'col', 'COL.COLO4_36438' => 'col', 'COL.COLO4_36439' => 'col', 'Cpa.g.c38781' => 'cpa', 'Cpa.g.sc128.12' => 'cpa', 'Cpa.g.sc166.7' => 'cpa', 'Cpa.g.sc166.8' => 'cpa', 'Cpa.g.sc20.111' => 'cpa', 'Cpa.g.sc27.31' => 'cpa', 'Cpa.g.sc64.36' => 'cpa', 'Cpa.g.sc64.37' => 'cpa', 'Cpa.g.sc66.49' => 'cpa', 'Cpa.g.sc80.64' => 'cpa', 'CsaV3_1G012320' => 'csa', 'CsaV3_2G008480' => 'csa', 'CsaV3_2G033450' => 'csa', 'CsaV3_3G044830' => 'csa', 'CsaV3_4G033710' => 'csa', 'CsaV3_6G051730' => 'csa', 'CsaV3_7G025350' => 'csa', 'CSS0001067' => 'camsi', 'CSS0005996' => 'camsi', 'CSS0006590' => 'camsi', 'CSS0009673' => 'camsi', 'CSS0010201' => 'camsi', 'CSS0010549' => 'camsi', 'CSS0011364' => 'camsi', 'CSS0014473' => 'camsi', 'CSS0014961' => 'camsi', 'CSS0020191' => 'camsi', 'CSS0021165' => 'camsi', 'CSS0022306' => 'camsi', 'CSS0030591' => 'camsi', 'CSS0030696' => 'camsi', 'CSS0032653' => 'camsi', 'CSS0037487' => 'camsi', 'CSS0041102' => 'camsi', 'CSS0041261' => 'camsi', 'CSS0046246' => 'camsi', 'CSS0049256' => 'camsi', 'DCAR_004075' => 'dca', 'DCAR_011538' => 'dca', 'DCAR_019553' => 'dca', 'DCAR_020952' => 'dca', 'DCAR_021739' => 'dca', 'DCAR_027407' => 'dca', 'DCAR_027913' => 'dca', 'DCAR_028066' => 'dca', 'Dinv05899' => 'din', 'Dinv07563' => 'din', 'Dinv08010' => 'din', 'Dinv14125' => 'din', 'Dinv20172' => 'din', 'Dinv30743' => 'din', 'Dinv31229' => 'din', 'Dinv34162' => 'din', 'Dinv36028' => 'din', 'Dinv39368' => 'din', 'Dinv40565' => 'din', 'Dinv41706' => 'din', 'Duzib052G0089' => 'dzi', 'Duzib116G0641' => 'dzi', 'Duzib132G0069' => 'dzi', 'Duzib132G1219' => 'dzi', 'Duzib147G0278' => 'dzi', 'Duzib160G0480' => 'dzi', 'Duzib170G0661' => 'dzi', 'Duzib177G0591' => 'dzi', 'Duzib187G1353' => 'dzi', 'Duzib192G0858' => 'dzi', 'Duzib192G0883' => 'dzi', 'Duzib213G0506' => 'dzi', 'Duzib235G0289' => 'dzi', 'Duzib251G0422' => 'dzi', 'ECA232G3898' => 'eca', 'ECA233G5950' => 'eca', 'ECA234G1699' => 'eca', 'ECA234G2421' => 'eca', 'ECA236G0426' => 'eca', 'ECA236G4331' => 'eca', 'ECA248G2573' => 'eca', 'EL10Ac1g00077' => 'bvu', 'EL10Ac1g01746' => 'bvu', 'EL10Ac2g03464' => 'bvu', 'EL10Ac4g08176' => 'bvu', 'EL10Ac7g17521' => 'bvu', 'EL10Ac8g20386' => 'bvu', 'EL10Ac9g21343' => 'bvu', 'EL10Ac9g22688' => 'bvu', 'Eucgr.B03434' => 'egr', 'Eucgr.D00618' => 'egr', 'Eucgr.E02395' => 'egr', 'Eucgr.F01129' => 'egr', 'Eucgr.F02622' => 'egr', 'Eucgr.F04207' => 'egr', 'FAN01G0570' => 'fan', 'FAN03G3351' => 'fan', 'FAN06G3702' => 'fan', 'FAN07G2149' => 'fan', 'FAN10G3758' => 'fan', 'FAN11G1170' => 'fan', 'FAN11G2050' => 'fan', 'FAN11G2724' => 'fan', 'FAN12G1700' => 'fan', 'FAN12G2028' => 'fan', 'FAN15G1160' => 'fan', 'FAN15G3063' => 'fan', 'FAN16G2540' => 'fan', 'FAN16G3077' => 'fan', 'FAN16G3624' => 'fan', 'FAN17G0221' => 'fan', 'FAN20G2492' => 'fan', 'FAN20G2905' => 'fan', 'FAN21G0548' => 'fan', 'FAN21G1300' => 'fan', 'FAN22G0077' => 'fan', 'FAN22G1315' => 'fan', 'FAN24G1280' => 'fan', 'FAN24G1445' => 'fan', 'FAN24G3527' => 'fan', 'FAN25G0464' => 'fan', 'FAN25G2885' => 'fan', 'FAN25G3270' => 'fan', 'FAN27G1101' => 'fan', 'FAN27G2846' => 'fan', 'FAN27G3524' => 'fan', 'FvH4_2g11770' => 'fve', 'FvH4_2g15630' => 'fve', 'FvH4_3g05570' => 'fve', 'FvH4_3g09110' => 'fve', 'FvH4_3g19940' => 'fve', 'FvH4_4g04821' => 'fve', 'FvH4_4g31480' => 'fve', 'FvH4_7g01740' => 'fve', 'Glyma.05G130400' => 'gma', 'Glyma.05G156400' => 'gma', 'Glyma.07G197000' => 'gma', 'Glyma.08G085151' => 'gma', 'Glyma.08G114500' => 'gma', 'Glyma.08G300400' => 'gma', 'Glyma.10G215800' => 'gma', 'Glyma.12G224400' => 'gma', 'Glyma.13G179300' => 'gma', 'Glyma.13G218151' => 'gma', 'Glyma.13G238800' => 'gma', 'Glyma.13G276900' => 'gma', 'Glyma.14G078200' => 'gma', 'Glyma.15G074500' => 'gma', 'Glyma.15G094100' => 'gma', 'Glyma.17G247200' => 'gma', 'Glyma.18G120100' => 'gma', 'Glyma.20G176000' => 'gma', 'Gohir.A01G063600' => 'ghi', 'Gohir.A01G170301' => 'ghi', 'Gohir.A02G060500' => 'ghi', 'Gohir.A05G133850' => 'ghi', 'Gohir.A05G161400' => 'ghi', 'Gohir.A06G012900' => 'ghi', 'Gohir.A06G035901' => 'ghi', 'Gohir.A06G127100' => 'ghi', 'Gohir.A06G210500' => 'ghi', 'Gohir.A08G008650' => 'ghi', 'Gohir.A09G072700' => 'ghi', 'Gohir.A09G088301' => 'ghi', 'Gohir.A10G040600' => 'ghi', 'Gohir.A12G036300' => 'ghi', 'Gohir.A12G143350' => 'ghi', 'Gohir.A12G165500' => 'ghi', 'Gohir.A13G145700' => 'ghi', 'Gohir.D01G050000' => 'ghi', 'Gohir.D01G051366' => 'ghi', 'Gohir.D01G161350' => 'ghi', 'Gohir.D02G065900' => 'ghi', 'Gohir.D05G164200' => 'ghi', 'Gohir.D05G355500' => 'ghi', 'Gohir.D06G010400' => 'ghi', 'Gohir.D06G111250' => 'ghi', 'Gohir.D06G132000' => 'ghi', 'Gohir.D06G210500' => 'ghi', 'Gohir.D07G165675' => 'ghi', 'Gohir.D08G062240' => 'ghi', 'Gohir.D08G086101' => 'ghi', 'Gohir.D08G138060' => 'ghi', 'Gohir.D09G072300' => 'ghi', 'Gohir.D10G041400' => 'ghi', 'Gohir.D11G191020' => 'ghi', 'Gohir.D11G212066' => 'ghi', 'Gohir.D12G036300' => 'ghi', 'Gohir.D12G168600' => 'ghi', 'Gohir.D13G150600' => 'ghi', 'Gorai.001G057300' => 'gra', 'Gorai.002G069900' => 'gra', 'Gorai.002G200000' => 'gra', 'Gorai.003G067600' => 'gra', 'Gorai.005G074800' => 'gra', 'Gorai.006G087300' => 'gra', 'Gorai.008G037500' => 'gra', 'Gorai.008G181400' => 'gra', 'Gorai.009G169400' => 'gra', 'Gorai.009G387900' => 'gra', 'Gorai.010G013300' => 'gra', 'Gorai.010G153800' => 'gra', 'Gorai.010G255800' => 'gra', 'Gorai.011G043700' => 'gra', 'Gorai.011G198900' => 'gra', 'Gorai.013G168400' => 'gra', 'GSVIVG01005212001' => 'vvi', 'GSVIVG01006163001' => 'vvi', 'GSVIVG01009625001' => 'vvi', 'GSVIVG01014338001' => 'vvi', 'GSVIVG01020005001' => 'vvi', 'GSVIVG01021450001' => 'vvi', 'GSVIVG01023975001' => 'vvi', 'GSVIVG01034490001' => 'vvi', 'HanXRQChr04g0112071' => 'han', 'HanXRQChr05g0131151' => 'han', 'HanXRQChr09g0262371' => 'han', 'HanXRQChr09g0268401' => 'han', 'HanXRQChr10g0279241' => 'han', 'HanXRQChr10g0297961' => 'han', 'HanXRQChr11g0326231' => 'han', 'HanXRQChr11g0328471' => 'han', 'HanXRQChr16g0507941' => 'han', 'HanXRQChr17g0560211' => 'han', 'Haze_02108' => 'cav', 'Haze_02428' => 'cav', 'Haze_05593' => 'cav', 'Haze_06448' => 'cav', 'Haze_09427' => 'cav', 'Haze_12022' => 'cav', 'Haze_17612' => 'cav', 'Haze_17928' => 'cav', 'Hma1.2p1_0032F.1_g019250' => 'hma', 'Hma1.2p1_0163F.1_g072690' => 'hma', 'Hma1.2p1_0265F.1_g106710' => 'hma', 'Hma1.2p1_0286F.1_g113970' => 'hma', 'Hma1.2p1_0363F.1_g136640' => 'hma', 'Hma1.2p1_0584F.1_g183470' => 'hma', 'Hma1.2p1_0885F.1_g232570' => 'hma', 'HPP92_006022' => 'vpl', 'HPP92_007320' => 'vpl', 'HPP92_011521' => 'vpl', 'HPP92_019387' => 'vpl', 'HPP92_024038' => 'vpl', 'Hund05891' => 'sun', 'Hund06450' => 'sun', 'Hund12053' => 'sun', 'Hund16800' => 'sun', 'Hund21222' => 'sun', 'Hund22896' => 'sun', 'Hund23746' => 'sun', 'Hund27083' => 'sun', 'Lalb_Chr02g0141831' => 'lal', 'Lalb_Chr02g0141841' => 'lal', 'Lalb_Chr05g0220411' => 'lal', 'Lalb_Chr06g0162081' => 'lal', 'Lalb_Chr09g0327651' => 'lal', 'Lalb_Chr13g0295051' => 'lal', 'Lalb_Chr15g0086801' => 'lal', 'Lalb_Chr16g0383781' => 'lal', 'Lalb_Chr16g0383791' => 'lal', 'Lalb_Chr18g0055441' => 'lal', 'Lalb_Chr18g0059611' => 'lal', 'Lalb_Chr20g0109661' => 'lal', 'Lalb_Chr20g0109831' => 'lal', 'Lalb_Chr20g0121871' => 'lal', 'Lalb_Chr22g0355361' => 'lal', 'Lalb_Chr25g0286371' => 'lal', 'Lj1A1187G43' => 'lonja', 'Lj1A1205T50' => 'lonja', 'Lj1A800G33' => 'lonja', 'Lj1C1187T7' => 'lonja', 'Lj1C843T11' => 'lonja', 'Lj1g0010940' => 'lja', 'Lj2A288T69' => 'lonja', 'Lj3g0024276' => 'lja', 'Lj4A47T76' => 'lonja', 'Lj4g0005805' => 'lja', 'Lj4g0006097' => 'lja', 'Lj4g0008528' => 'lja', 'Lj4g0024907' => 'lja', 'Lj5g0012472' => 'lja', 'Lj5g0018648' => 'lja', 'Lj6C789G1' => 'lonja', 'Lj6g0004000' => 'lja', 'Lj7A292G67' => 'lonja', 'Lj7A292T64' => 'lonja', 'Lj9A400T58' => 'lonja', 'Lsat_1_v5_gn_1_126181' => 'lsa', 'Lsat_1_v5_gn_4_123041' => 'lsa', 'Lsat_1_v5_gn_4_133620' => 'lsa', 'Lsat_1_v5_gn_4_53221' => 'lsa', 'Lsat_1_v5_gn_4_71961' => 'lsa', 'Lsat_1_v5_gn_7_105241' => 'lsa', 'Lsat_1_v5_gn_7_21361' => 'lsa', 'Lsat_1_v5_gn_7_28860' => 'lsa', 'Lsat_1_v5_gn_7_31260' => 'lsa', 'Lsat_1_v5_gn_8_52801' => 'lsa', 'Manes.02G191400' => 'mes', 'Manes.03G110100' => 'mes', 'Manes.04G071100' => 'mes', 'Manes.05G100500' => 'mes', 'Manes.05G164700' => 'mes', 'Manes.15G087000' => 'mes', 'Manes.15G121500' => 'mes', 'Manes.16G028300' => 'mes', 'Manes.17G046100' => 'mes', 'Manes.17G069800' => 'mes', 'Manes.18G100500' => 'mes', 'Mapoly0002s0109' => 'mpo', 'Mapoly0024s0007' => 'mpo', 'Mapoly0089s0032' => 'mpo', 'MBI04_g42241_MAGBIO' => 'mbi', 'MBI05_g11988_MAGBIO' => 'mbi', 'MBI05_g35452_MAGBIO' => 'mbi', 'MBI07_g30179_MAGBIO' => 'mbi', 'MBI07_g35859_MAGBIO' => 'mbi', 'MBI07_g35860_MAGBIO' => 'mbi', 'MBI07_g37166_MAGBIO' => 'mbi', 'MBI08_g18172_MAGBIO' => 'mbi', 'MBI09_g08441_MAGBIO' => 'mbi', 'MBI13_g01676_MAGBIO' => 'mbi', 'MBI14_g42955_MAGBIO' => 'mbi', 'MBI16_g13161_MAGBIO' => 'mbi', 'MBI17_g27204_MAGBIO' => 'mbi', 'MBI19_g21595_MAGBIO' => 'mbi', 'MD00G1148400' => 'mdo', 'MD02G1301200' => 'mdo', 'MD03G1227800' => 'mdo', 'MD05G1041100' => 'mdo', 'MD05G1124800' => 'mdo', 'MD05G1284000' => 'mdo', 'MD05G1338800' => 'mdo', 'MD05G1338900' => 'mdo', 'MD07G1022800' => 'mdo', 'MD10G1047500' => 'mdo', 'MD10G1127500' => 'mdo', 'MD10G1262300' => 'mdo', 'MD10G1293800' => 'mdo', 'MD16G1074300' => 'mdo', 'Medtr1g021670' => 'mtr', 'Medtr1g096320' => 'mtr', 'Medtr2g013690' => 'mtr', 'Medtr2g019450' => 'mtr', 'Medtr2g085170' => 'mtr', 'Medtr4g088785' => 'mtr', 'Medtr8g055930' => 'mtr', 'Medtr8g085850' => 'mtr', 'MELO3C002605.2' => 'cme', 'MELO3C003891.2' => 'cme', 'MELO3C004012.2' => 'cme', 'MELO3C007134.2' => 'cme', 'MELO3C008118.2' => 'cme', 'MELO3C016700.2' => 'cme', 'MELO3C024127.2' => 'cme', 'MELO3C033361.2' => 'cme', 'MELO3C033362.2' => 'cme', 'Migut.C00430' => 'egut', 'Migut.C01246' => 'egut', 'Migut.E00101' => 'egut', 'Migut.H01486' => 'egut', 'Migut.H01939' => 'egut', 'Migut.K00360' => 'egut', 'Migut.M00910' => 'egut', 'Migut.M01139' => 'egut', 'Migut.N02677' => 'egut', 'MSTRG.13252' => 'ama', 'MSTRG.14701' => 'ama', 'MSTRG.1521' => 'ama', 'MSTRG.15884' => 'ama', 'MSTRG.16242' => 'ama', 'MSTRG.22285' => 'ama', 'MSTRG.22444' => 'ama', 'MSTRG.2349' => 'ama', 'MSTRG.26308' => 'ama', 'MSTRG.28296' => 'ama', 'MSTRG.9895' => 'ama', 'Nitab4.5_0000110g0060' => 'nta', 'Nitab4.5_0000420g0130' => 'nta', 'Nitab4.5_0000422g0030' => 'nta', 'Nitab4.5_0000560g0180' => 'nta', 'Nitab4.5_0000703g0100' => 'nta', 'Nitab4.5_0000786g0200' => 'nta', 'Nitab4.5_0001336g0020' => 'nta', 'Nitab4.5_0001796g0030' => 'nta', 'Nitab4.5_0003348g0060' => 'nta', 'Nitab4.5_0003698g0040' => 'nta', 'Nitab4.5_0003942g0090' => 'nta', 'Nitab4.5_0004775g0070' => 'nta', 'Nitab4.5_0004864g0030' => 'nta', 'Nitab4.5_0005615g0020' => 'nta', 'Nitab4.5_0009288g0030' => 'nta', 'Nitab4.5_0009341g0010' => 'nta', 'Nitab4.5_0009535g0010' => 'nta', 'Nn1g03995' => 'nnu', 'Nn1g04100' => 'nnu', 'Nn1g06530' => 'nnu', 'Nn3g16404' => 'nnu', 'Nn3g17212' => 'nnu', 'Nn3g20776' => 'nnu', 'Nn3g21923' => 'nnu', 'Nn5g27737' => 'nnu', 'Nn5g29461' => 'nnu', 'Nn7g38355' => 'nnu', 'Nn8g39873' => 'nnu', 'Oeu000548.2' => 'oeu', 'Oeu004672.1' => 'oeu', 'Oeu015605.2' => 'oeu', 'Oeu016092.1' => 'oeu', 'Oeu017879.3' => 'oeu', 'Oeu024910.1' => 'oeu', 'Oeu028965.1' => 'oeu', 'Oeu031269.1' => 'oeu', 'Oeu031270.1' => 'oeu', 'Oeu032535.1' => 'oeu', 'Oeu034151.1' => 'oeu', 'Oeu034152.1' => 'oeu', 'Oeu034588.2' => 'oeu', 'Oeu050846.1' => 'oeu', 'Oeu050849.2' => 'oeu', 'Oeu051063.2' => 'oeu', 'Oeu052368.1' => 'oeu', 'Oeu052370.1' => 'oeu', 'Os01g0210400' => 'osa', 'Os01g0304300' => 'osa', 'Os01g0749100' => 'osa', 'Os02g0745800' => 'osa', 'Os03g0769050' => 'osa', 'Os05g0531500' => 'osa', 'Os06g0724300' => 'osa', 'Os11g0198100' => 'osa', 'Peaxi162Scf00069g01425' => 'pax', 'Peaxi162Scf00280g00811' => 'pax', 'Peaxi162Scf00310g00615' => 'pax', 'Peaxi162Scf00362g00542' => 'pax', 'Peaxi162Scf00461g00310' => 'pax', 'Peaxi162Scf00530g00118' => 'pax', 'Peaxi162Scf00541g00057' => 'pax', 'Peaxi162Scf00661g00017' => 'pax', 'Peaxi162Scf00926g00027' => 'pax', 'Peaxi162Scf01064g00263' => 'pax', 'Peaxi162Scf01211g00135' => 'pax', 'PGR004G2336' => 'pgr', 'PGR042G0327' => 'pgr', 'PGR042G1957' => 'pgr', 'PGR042G2003' => 'pgr', 'PGR042G3929' => 'pgr', 'PGR083G1137' => 'pgr', 'PGR083G1364' => 'pgr', 'PGSC0003DMG400003381' => 'stu', 'PGSC0003DMG400003417' => 'stu', 'PGSC0003DMG400008981' => 'stu', 'PGSC0003DMG400012417' => 'stu', 'PGSC0003DMG400012823' => 'stu', 'PGSC0003DMG400016885' => 'stu', 'PGSC0003DMG400022812' => 'stu', 'PGSC0003DMG400029726' => 'stu', 'PGSC0003DMG401009243' => 'stu', 'PGSC0003DMG401031505' => 'stu', 'PGSC0003DMG402031505' => 'stu', 'Phvul.001G017600' => 'pvu', 'Phvul.002G193500' => 'pvu', 'Phvul.002G228900' => 'pvu', 'Phvul.002G236800' => 'pvu', 'Phvul.003G049500' => 'pvu', 'Phvul.005G072000' => 'pvu', 'Phvul.006G164800' => 'pvu', 'Phvul.006G185100' => 'pvu', 'Phvul.007G090000' => 'pvu', 'Potri.001G399800' => 'ptr', 'Potri.002G149900' => 'ptr', 'Potri.004G044100' => 'ptr', 'Potri.004G177600' => 'ptr', 'Potri.009G138000' => 'ptr', 'Potri.010G094000' => 'ptr', 'Potri.011G053000' => 'ptr', 'Potri.011G119300' => 'ptr', 'Potri.013G113700' => 'ptr', 'Potri.018G107800' => 'ptr', 'Potri.019G084100' => 'ptr', 'Pp3c14_23720' => 'ppa', 'Pp3c16_6340' => 'ppa', 'Pp3c23_13420' => 'ppa', 'Pp3c24_2740' => 'ppa', 'Pp3c25_860' => 'ppa', 'Pp3c8_21750' => 'ppa', 'Prupe.1G273000' => 'ppe', 'Prupe.1G273700' => 'ppe', 'Prupe.1G274100' => 'ppe', 'Prupe.2G023300' => 'ppe', 'Prupe.4G048000' => 'ppe', 'Prupe.4G080400' => 'ppe', 'Prupe.4G181200' => 'ppe', 'Prupe.8G056900' => 'ppe', 'Prupe.8G168700' => 'ppe', 'Psat1g189080' => 'psa', 'Psat1g204760' => 'psa', 'Psat4g175560' => 'psa', 'Psat4g177720' => 'psa', 'Psat5g244240' => 'psa', 'Psat6g010720' => 'psa', 'Psat6g187200' => 'psa', 'Psat7g072040' => 'psa', 'PSO017G3501' => 'pso', 'PSO063G2148' => 'pso', 'PSO063G5608' => 'pso', 'PSO210G6392' => 'pso', 'PSO541G2319' => 'pso', 'PSO541G2836' => 'pso', 'PSO541G4012' => 'pso', 'PSO541G6253' => 'pso', 'PSO675G0580' => 'pso', 'PSO675G0856' => 'pso', 'PSO675G5635' => 'pso', 'PSO675G9157' => 'pso', 'PSO832G1660' => 'pso', 'PSO832G1969' => 'pso', 'QL02p007186' => 'qlo', 'QL02p033904' => 'qlo', 'QL03p064391' => 'qlo', 'QL05p040593' => 'qlo', 'QL05p058242' => 'qlo', 'QL08p021825' => 'qlo', 'QL11p004981' => 'qlo', 'RcHm_v2.0_Chr1g0318301' => 'rch', 'RcHm_v2.0_Chr4g0418501' => 'rch', 'RcHm_v2.0_Chr4g0439971' => 'rch', 'RcHm_v2.0_Chr5g0008541' => 'rch', 'RcHm_v2.0_Chr5g0014101' => 'rch', 'RcHm_v2.0_Chr5g0014131' => 'rch', 'RcHm_v2.0_Chr5g0033621' => 'rch', 'RcHm_v2.0_Chr6g0272041' => 'rch', 'RcHm_v2.0_Chr6g0278831' => 'rch', 'Rhsim02G0130400' => 'rsi', 'Rhsim02G0171100' => 'rsi', 'Rhsim05G0053000' => 'rsi', 'Rhsim05G0053100' => 'rsi', 'Rhsim06G0096500' => 'rsi', 'Rhsim06G0096600' => 'rsi', 'Rhsim06G0199100' => 'rsi', 'Rhsim12G0062300' => 'rsi', 'Rhsim12G0062800' => 'rsi', 'Sabra02G0118600' => 'sbr', 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'Solyc03g079860.2' => 'sly', 'Solyc04g079770.3' => 'sly', 'Solyc05g007430.4' => 'sly', 'Solyc07g063150.3' => 'sly', 'Solyc08g016620.3' => 'sly', 'Solyc09g057590.3' => 'sly', 'Solyc09g057600.1' => 'sly', 'Solyc10g009050.3' => 'sly', 'Solyc11g017420.2' => 'sly', 'Sopen01g053810' => 'spe', 'Sopen02g023040' => 'spe', 'Sopen03g002440' => 'spe', 'Sopen04g033350' => 'spe', 'Sopen05g003310' => 'spe', 'Sopen07g004050' => 'spe', 'Sopen07g031340' => 'spe', 'Sopen08g006990' => 'spe', 'Sopen10g004830' => 'spe', 'Sopen11g009370' => 'spe', 'Sp1g24450' => 'spa', 'Sp1g29670' => 'spa', 'Sp1g39600' => 'spa', 'Sp2g11080' => 'spa', 'Sp2g13970' => 'spa', 'Sp4g16130' => 'spa', 'Sp6g13080' => 'spa', 'Sp7g37270' => 'spa', 'TAR371G0065' => 'tar', 'TAR376G0340' => 'tar', 'TAR376G0435' => 'tar', 'TAR381G0002' => 'tar', 'TAR381G1236' => 'tar', 'TAR624G0055' => 'tar', 'TAR624G0324' => 'tar', 'TAR624G0696' => 'tar', 'TAR624G0906' => 'tar', 'TAR625G0107' => 'tar', 'TAR626G0015' => 'tar', 'TAR626G1356' => 'tar', 'TAR627G0888' => 'tar', 'TAR628G0399' => 'tar', 'TAR628G1327' => 'tar', 'TAR629G2831' => 'tar', 'TAR629G2874' => 'tar', 'TAR633G1432' => 'tar', 'TAR633G2771' => 'tar', 'THA.LOC104803394' => 'tha', 'THA.LOC104805153' => 'tha', 'THA.LOC104806784' => 'tha', 'THA.LOC104810473' => 'tha', 'THA.LOC104813100' => 'tha', 'THA.LOC104814215' => 'tha', 'THA.LOC104815554' => 'tha', 'THA.LOC104820544' => 'tha', 'THA.LOC104824754' => 'tha', 'THA.LOC104827717' => 'tha', 'Thecc.02G031400' => 'tca', 'Thecc.02G055900' => 'tca', 'Thecc.02G350800' => 'tca', 'Thecc.06G150900' => 'tca', 'Thecc.06G186600' => 'tca', 'Thecc.07G089600' => 'tca', 'Thecc.08G020400' => 'tca', 'Thecc.08G182100' => 'tca', 'Thhalv10000873m.g' => 'esa', 'Thhalv10004185m.g' => 'esa', 'Thhalv10006981m.g' => 'esa', 'Thhalv10007204m.g' => 'esa', 'Thhalv10011374m.g' => 'esa', 'Thhalv10013482m.g' => 'esa', 'Thhalv10017801m.g' => 'esa', 'Thhalv10024983m.g' => 'esa', 'TPR.G12072' => 'tpr', 'TPR.G15769' => 'tpr', 'TPR.G16504' => 'tpr', 'TPR.G16506' => 'tpr', 'TPR.G24345' => 'tpr', 'TPR.G26666' => 'tpr', 'TPR.G27320' => 'tpr', 'TPR.G31819' => 'tpr', 'TPR.G38879' => 'tpr', 'TPR.G39015' => 'tpr', 'TPR.G8819' => 'tpr', 'TWI09G0924' => 'twi', 'TWI12G0811' => 'twi', 'TWI12G1294' => 'twi', 'TWI31G0150' => 'twi', 'TWI36G1262' => 'twi', 'TWI38G1287' => 'twi', 'TWI38G1633' => 'twi', 'TWI38G1982' => 'twi', 'TWI39G0116' => 'twi', 'TWI60G1011' => 'twi', 'TWI63G0171' => 'twi', 'TWI73G0839' => 'twi', 'TWI79G1511' => 'twi', 'unitig_0.g915' => 'ugi', 'unitig_0.g916' => 'ugi', 'unitig_21.g20219' => 'ugi', 'unitig_21.g20416' => 'ugi', 'unitig_578.g16132' => 'ugi', 'unitig_578.g16718' => 'ugi', 'unitig_62.g23481' => 'ugi', 'unitig_744.g24535' => 'ugi', 'unitig_749.g13525' => 'ugi', 'vmacro01248' => 'vma', 'vmacro02290' => 'vma', 'vmacro10946' => 'vma', 'vmacro11865' => 'vma', 'vmacro12493' => 'vma', 'vmacro17322' => 'vma', 'vmacro21599' => 'vma', 'vmacro23041' => 'vma', 'VMungo0251G0004' => 'vmu', 'VMungo0251G2639' => 'vmu', 'VMungo0251G2967' => 'vmu', 'VMungo0540G0864' => 'vmu', 'VMungo0540G1569' => 'vmu', 'VMungo0647G0317' => 'vmu', 'VMungo0720G1373' => 'vmu', 'VMungo0720G1508' => 'vmu', 'VMungo1080G0485' => 'vmu', 'VMungo1215G3177' => 'vmu', 'Zm00001eb112600' => 'zma', 'Zm00001eb120220' => 'zma', 'Zm00001eb153240' => 'zma', 'Zm00001eb168880' => 'zma', 'Zm00001eb213920' => 'zma', 'Zm00001eb228280' => 'zma', 'Zm00001eb254580' => 'zma', 'Zm00001eb272180' => 'zma', 'Zm00001eb293190' => 'zma', 'Zm00001eb322930' => 'zma', 'Zm00001eb353360' => 'zma', 'Zm00001eb353390' => 'zma', 'Zm00001eb353430' => 'zma', 'Zm00001eb353440' => 'zma', 'Zm00001eb353780' => 'zma' ), 'gf_id' => 'HOM05D000499', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000499' ), 'data_identifier' => 'HOM05D000499', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000499', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1066', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p29780' => 'bna', 'A02p33180' => 'bna', 'A03p16470' => 'bna', 'A03p66010' => 'bna', 'A04p25970' => 'bna', 'A06p01270' => 'bna', 'A06p46080' => 'bna', 'A07p11400' => 'bna', 'A08p01840' => 'bna', 'A08p08230' => 'bna', 'A08p25740' => 'bna', 'A09p32070' => 'bna', 'A09p37830' => 'bna', 'A09p42840' => 'bna', 'A09p42850' => 'bna', 'Aa31LG10G2060' => 'aar', 'Aa31LG2G7410' => 'aar', 'Aa31LG6G10200' => 'aar', 'Aa31LG6G16680' => 'aar', 'Aa31LG6G8470' => 'aar', 'Aa31LG9G12730' => 'aar', 'Aa31LG9G13680' => 'aar', 'Aa31LG9G14920' => 'aar', 'Aa31LG9G6650' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4977' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5467' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3254' => 'aag', 'Actinidia02578' => 'ach', 'Actinidia07693' => 'ach', 'Actinidia08413' => 'ach', 'Actinidia08414' => 'ach', 'Actinidia15289' => 'ach', 'Actinidia19871' => 'ach', 'Actinidia21475' => 'ach', 'Actinidia22576' => 'ach', 'Actinidia28327' => 'ach', 'Actinidia32491' => 'ach', 'Actinidia39463' => 'ach', 'Actinidia39571' => 'ach', 'Ah.01g013750' => 'amhyb', 'Ah.01g023210' => 'amhyb', 'Ah.04g164850' => 'amhyb', 'Ah.05g178060' => 'amhyb', 'Ah.07g204270' => 'amhyb', 'Ah.07g208480' => 'amhyb', 'Ah.09g237410' => 'amhyb', 'Ah.14g089460' => 'amhyb', 'AL1G41790' => 'aly', 'AL1G49050' => 'aly', 'AL1G53810' => 'aly', 'AL1G61400' => 'aly', 'AL4G18580' => 'aly', 'AL5G12510' => 'aly', 'AL5G12540' => 'aly', 'AL6G43230' => 'aly', 'AL7G10370' => 'aly', 'AL7G19250' => 'aly', 'AL8G12240' => 'aly', 'AL8G18540' => 'aly', 'Aqoxy1G02409' => 'aox', 'Aqoxy2G03993' => 'aox', 'Aqoxy3G03357' => 'aox', 'Aqoxy4G00785' => 'aox', 'Aqoxy5G02598' => 'aox', 'Aqoxy6G00132' => 'aox', 'Aqoxy7G01776' => 'aox', 'Aqoxy7G02316' => 'aox', 'Aqoxy7G03973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.12AFKW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B8730' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27IQR1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3F75VG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3RE0GA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41TCQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.527VTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FIR39' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5W8UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DA38EV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ63HS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H1I32C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HC27T5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4M8AP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7N3CZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9UVDZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LS1NQA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT1D4B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SKC4TM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCFV76' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF9Q1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQWD9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1ZM88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WE07RT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YCK7VH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJE6Q6' => 'arhy', 'AT1G28240' => 'ath', 'AT1G34550' => 'ath', 'AT1G53040' => 'ath', 'AT2G02910' => 'ath', 'AT4G09630' => 'ath', 'AT4G38500' => 'ath', 'AT5G42660' => 'ath', 'AT5G46220' => 'ath', 'ATR0152G026' => 'atr', 'ATR0564G343' => 'atr', 'ATR0706G151' => 'atr', 'ATR0733G207' => 'atr', 'ATR0751G234' => 'atr', 'ATR0807G048' => 'atr', 'ATR1091G084' => 'atr', 'Atru.chr10.1229' => 'acertr', 'Atru.chr10.1230' => 'acertr', 'Atru.chr10.1874' => 'acertr', 'Atru.chr11.1808' => 'acertr', 'Atru.chr13.1795' => 'acertr', 'Atru.chr13.570' => 'acertr', 'Atru.chr2.2608' => 'acertr', 'Atru.chr2.2609' => 'acertr', 'Atru.chr5.3428' => 'acertr', 'Atru.chr8.1171' => 'acertr', 'AUR62004651' => 'cqu', 'AUR62008675' => 'cqu', 'AUR62010014' => 'cqu', 'AUR62013004' => 'cqu', 'AUR62014825' => 'cqu', 'AUR62015015' => 'cqu', 'AUR62015151' => 'cqu', 'AUR62017020' => 'cqu', 'AUR62019422' => 'cqu', 'AUR62023570' => 'cqu', 'AUR62025571' => 'cqu', 'AUR62029098' => 'cqu', 'AUR62033863' => 'cqu', 'AUR62034296' => 'cqu', 'AUR62040075' => 'cqu', 'BcaB02g07334' => 'bca', 'BcaB02g10575' => 'bca', 'BcaB03g12119' => 'bca', 'BcaB03g12120' => 'bca', 'BcaB03g13945' => 'bca', 'BcaB04g17123' => 'bca', 'BcaB04g17867' => 'bca', 'BcaB04g19839' => 'bca', 'BcaB07g30317' => 'bca', 'BcaB07g32432' => 'bca', 'BcaB07g33362' => 'bca', 'BcaB08g36611' => 'bca', 'BcaC01g00028' => 'bca', 'BcaC01g01356' => 'bca', 'BcaC01g02034' => 'bca', 'BcaC01g06051' => 'bca', 'BcaC03g16839' => 'bca', 'BcaC03g17176' => 'bca', 'BcaC05g26829' => 'bca', 'BcaC06g31490' => 'bca', 'BcaC06g35344' => 'bca', 'BcaC06g36570' => 'bca', 'BcaC07g37537' => 'bca', 'BcaC08g43491' => 'bca', 'BcaC08g43773' => 'bca', 'BcaNung00234' => 'bca', 'BcaNung01982' => 'bca', 'BcaNung03707' => 'bca', 'BcaNung06454' => 'bca', 'BolC2t10762H' => 'bol', 'BolC2t11191H' => 'bol', 'BolC3t14322H' => 'bol', 'BolC3t19747H' => 'bol', 'BolC3t21425H' => 'bol', 'BolC4t27800H' => 'bol', 'BolC5t31423H' => 'bol', 'BolC6t35951H' => 'bol', 'BolC6t36282H' => 'bol', 'BolC7t40678H' => 'bol', 'BolC7t40679H' => 'bol', 'BolC7t42222H' => 'bol', 'BolC7t43492H' => 'bol', 'BolC7t46785H' => 'bol', 'BolC8t47853H' => 'bol', 'BolC9t56805H' => 'bol', 'BraA02t08000Z' => 'bra', 'BraA02t08341Z' => 'bra', 'BraA03t10936Z' => 'bra', 'BraA03t15657Z' => 'bra', 'BraA04t18100Z' => 'bra', 'BraA05t20523Z' => 'bra', 'BraA06t23353Z' => 'bra', 'BraA06t27473Z' => 'bra', 'BraA06t27769Z' => 'bra', 'BraA07t28928Z' => 'bra', 'BraA08t32236Z' => 'bra', 'BraA08t32841Z' => 'bra', 'BraA08t34524Z' => 'bra', 'BraA09t38742Z' => 'bra', 'BraA09t39295Z' => 'bra', 'C02p47180' => 'bna', 'C02p50990' => 'bna', 'C03p19360' => 'bna', 'C03p74950' => 'bna', 'C03p91000' => 'bna', 'C04p63260' => 'bna', 'C05p27050' => 'bna', 'C06p08750' => 'bna', 'C06p11490' => 'bna', 'C07p02820' => 'bna', 'C07p17180' => 'bna', 'C07p29440' => 'bna', 'C07p63730' => 'bna', 'C09p39260' => 'bna', 'CAN.G1164.34' => 'can', 'CAN.G1164.39' => 'can', 'CAN.G1530.3' => 'can', 'CAN.G162.61' => 'can', 'CAN.G176.6' => 'can', 'CAN.G289.49' => 'can', 'CAN.G370.21' => 'can', 'CAN.G370.22' => 'can', 'CAN.G371.117' => 'can', 'CAN.G58.37' => 'can', 'CAN.G588.98' => 'can', 'CANSAT21G2266' => 'cansat', 'CANSAT25G2799' => 'cansat', 'CANSAT35G0862' => 'cansat', 'CANSAT35G1704' => 'cansat', 'CANSAT35G1760' => 'cansat', 'CANSAT56G3971' => 'cansat', 'CANSAT56G4116' => 'cansat', 'CANSAT80G1259' => 'cansat', 'CARHR027730' => 'chi', 'CARHR033880' => 'chi', 'CARHR043270' => 'chi', 'CARHR145330' => 'chi', 'CARHR145340' => 'chi', 'CARHR175570' => 'chi', 'CARHR181570' => 'chi', 'CARHR258470' => 'chi', 'CARHR260490' => 'chi', 'CARHR294220' => 'chi', 'Carub.0001s2668' => 'cru', 'Carub.0001s3257' => 'cru', 'Carub.0001s4220' => 'cru', 'Carub.0005s0179' => 'cru', 'Carub.0006s2807' => 'cru', 'Carub.0007s0039' => 'cru', 'Carub.0008s0169' => 'cru', 'Carub.0008s0636' => 'cru', 'Ca_00338_v3' => 'car', 'Ca_00542_v3' => 'car', 'Ca_01844_v3' => 'car', 'Ca_10611_v3' => 'car', 'Ca_13326_v3' => 'car', 'Ca_17944_v3' => 'car', 'Ca_18546_v3' => 'car', 'Ca_24219_v3' => 'car', 'Ca_29972_v3' => 'car', 'CBR_g3681' => 'cbr', 'CBR_g40021' => 'cbr', 'Cc01_g08140' => 'ccan', 'Cc02_g13410' => 'ccan', 'Cc02_g37480' => 'ccan', 'Cc05_g12030' => 'ccan', 'Cc09_g03370' => 'ccan', 'Cc09_g10300' => 'ccan', 'Cc10_g03530' => 'ccan', 'Cc10_g11380' => 'ccan', 'CDE01G0176' => 'cde', 'CDE02G0675' => 'cde', 'CDE02G0942' => 'cde', 'CDE02G1153' => 'cde', 'CDE02G4177' => 'cde', 'CDE04G2117' => 'cde', 'CDE04G2736' => 'cde', 'CDE08G1161' => 'cde', 'CDE09G1238' => 'cde', 'Cfa000467' => 'cfa', 'Cfa000947' => 'cfa', 'Cfa004969' => 'cfa', 'Cfa005284' => 'cfa', 'Cfa008993' => 'cfa', 'Cfa018187' => 'cfa', 'Cfa018454' => 'cfa', 'Cfa020585' => 'cfa', 'Ciclev10000424m.g' => 'ccl', 'Ciclev10003605m.g' => 'ccl', 'Ciclev10007828m.g' => 'ccl', 'Ciclev10014620m.g' => 'ccl', 'Ciclev10015169m.g' => 'ccl', 'Ciclev10018291m.g' => 'ccl', 'Ciclev10028256m.g' => 'ccl', 'Ciclev10033822m.g' => 'ccl', 'CiPaw.05G060300' => 'cil', 'CiPaw.05G085000' => 'cil', 'CiPaw.06G083700' => 'cil', 'CiPaw.06G120300' => 'cil', 'CiPaw.09G060500' => 'cil', 'CiPaw.09G123800' => 'cil', 'CiPaw.11G169700' => 'cil', 'CiPaw.12G118300' => 'cil', 'CiPaw.15G071000' => 'cil', 'CiPaw.15G081900' => 'cil', 'ClCG01G024610' => 'cla', 'ClCG03G006070' => 'cla', 'ClCG05G019250' => 'cla', 'ClCG09G009500' => 'cla', 'ClCG11G008200' => 'cla', 'ClCG11G018080' => 'cla', 'COL.COLO4_17373' => 'col', 'COL.COLO4_22994' => 'col', 'COL.COLO4_26389' => 'col', 'COL.COLO4_27170' => 'col', 'COL.COLO4_31074' => 'col', 'COL.COLO4_31465' => 'col', 'COL.COLO4_36438' => 'col', 'COL.COLO4_36439' => 'col', 'Cpa.g.c38781' => 'cpa', 'Cpa.g.sc128.12' => 'cpa', 'Cpa.g.sc166.7' => 'cpa', 'Cpa.g.sc166.8' => 'cpa', 'Cpa.g.sc20.111' => 'cpa', 'Cpa.g.sc27.31' => 'cpa', 'Cpa.g.sc64.36' => 'cpa', 'Cpa.g.sc64.37' => 'cpa', 'Cpa.g.sc66.49' => 'cpa', 'Cpa.g.sc80.64' => 'cpa', 'CsaV3_1G012320' => 'csa', 'CsaV3_2G008480' => 'csa', 'CsaV3_2G033450' => 'csa', 'CsaV3_3G044830' => 'csa', 'CsaV3_4G033710' => 'csa', 'CsaV3_6G051730' => 'csa', 'CsaV3_7G025350' => 'csa', 'CSS0001067' => 'camsi', 'CSS0005996' => 'camsi', 'CSS0006590' => 'camsi', 'CSS0009673' => 'camsi', 'CSS0010201' => 'camsi', 'CSS0010549' => 'camsi', 'CSS0011364' => 'camsi', 'CSS0014473' => 'camsi', 'CSS0014961' => 'camsi', 'CSS0020191' => 'camsi', 'CSS0021165' => 'camsi', 'CSS0022306' => 'camsi', 'CSS0030591' => 'camsi', 'CSS0030696' => 'camsi', 'CSS0032653' => 'camsi', 'CSS0037487' => 'camsi', 'CSS0041102' => 'camsi', 'CSS0041261' => 'camsi', 'CSS0046246' => 'camsi', 'CSS0049256' => 'camsi', 'DCAR_004075' => 'dca', 'DCAR_011538' => 'dca', 'DCAR_019553' => 'dca', 'DCAR_020952' => 'dca', 'DCAR_021739' => 'dca', 'DCAR_027407' => 'dca', 'DCAR_027913' => 'dca', 'DCAR_028066' => 'dca', 'Dinv05899' => 'din', 'Dinv07563' => 'din', 'Dinv08010' => 'din', 'Dinv14125' => 'din', 'Dinv20172' => 'din', 'Dinv30743' => 'din', 'Dinv31229' => 'din', 'Dinv34162' => 'din', 'Dinv36028' => 'din', 'Dinv39368' => 'din', 'Dinv40565' => 'din', 'Dinv41706' => 'din', 'Duzib052G0089' => 'dzi', 'Duzib116G0641' => 'dzi', 'Duzib132G0069' => 'dzi', 'Duzib132G1219' => 'dzi', 'Duzib147G0278' => 'dzi', 'Duzib160G0480' => 'dzi', 'Duzib170G0661' => 'dzi', 'Duzib177G0591' => 'dzi', 'Duzib187G1353' => 'dzi', 'Duzib192G0858' => 'dzi', 'Duzib192G0883' => 'dzi', 'Duzib213G0506' => 'dzi', 'Duzib235G0289' => 'dzi', 'Duzib251G0422' => 'dzi', 'ECA232G3898' => 'eca', 'ECA233G5950' => 'eca', 'ECA234G1699' => 'eca', 'ECA234G2421' => 'eca', 'ECA236G0426' => 'eca', 'ECA236G4331' => 'eca', 'ECA248G2573' => 'eca', 'EL10Ac1g00077' => 'bvu', 'EL10Ac1g01746' => 'bvu', 'EL10Ac2g03464' => 'bvu', 'EL10Ac4g08176' => 'bvu', 'EL10Ac7g17521' => 'bvu', 'EL10Ac8g20386' => 'bvu', 'EL10Ac9g21343' => 'bvu', 'EL10Ac9g22688' => 'bvu', 'Eucgr.B03434' => 'egr', 'Eucgr.D00618' => 'egr', 'Eucgr.E02395' => 'egr', 'Eucgr.F01129' => 'egr', 'Eucgr.F02622' => 'egr', 'Eucgr.F04207' => 'egr', 'FAN01G0570' => 'fan', 'FAN03G3351' => 'fan', 'FAN06G3702' => 'fan', 'FAN07G2149' => 'fan', 'FAN10G3758' => 'fan', 'FAN11G1170' => 'fan', 'FAN11G2050' => 'fan', 'FAN11G2724' => 'fan', 'FAN12G1700' => 'fan', 'FAN12G2028' => 'fan', 'FAN15G1160' => 'fan', 'FAN15G3063' => 'fan', 'FAN16G2540' => 'fan', 'FAN16G3077' => 'fan', 'FAN16G3624' => 'fan', 'FAN17G0221' => 'fan', 'FAN20G2492' => 'fan', 'FAN20G2905' => 'fan', 'FAN21G0548' => 'fan', 'FAN21G1300' => 'fan', 'FAN22G0077' => 'fan', 'FAN22G1315' => 'fan', 'FAN24G1280' => 'fan', 'FAN24G1445' => 'fan', 'FAN24G3527' => 'fan', 'FAN25G0464' => 'fan', 'FAN25G2885' => 'fan', 'FAN25G3270' => 'fan', 'FAN27G1101' => 'fan', 'FAN27G2846' => 'fan', 'FAN27G3524' => 'fan', 'FvH4_2g11770' => 'fve', 'FvH4_2g15630' => 'fve', 'FvH4_3g05570' => 'fve', 'FvH4_3g09110' => 'fve', 'FvH4_3g19940' => 'fve', 'FvH4_4g04821' => 'fve', 'FvH4_4g31480' => 'fve', 'FvH4_7g01740' => 'fve', 'Glyma.05G130400' => 'gma', 'Glyma.05G156400' => 'gma', 'Glyma.07G197000' => 'gma', 'Glyma.08G085151' => 'gma', 'Glyma.08G114500' => 'gma', 'Glyma.08G300400' => 'gma', 'Glyma.10G215800' => 'gma', 'Glyma.12G224400' => 'gma', 'Glyma.13G179300' => 'gma', 'Glyma.13G218151' => 'gma', 'Glyma.13G238800' => 'gma', 'Glyma.13G276900' => 'gma', 'Glyma.14G078200' => 'gma', 'Glyma.15G074500' => 'gma', 'Glyma.15G094100' => 'gma', 'Glyma.17G247200' => 'gma', 'Glyma.18G120100' => 'gma', 'Glyma.20G176000' => 'gma', 'Gohir.A01G063600' => 'ghi', 'Gohir.A01G170301' => 'ghi', 'Gohir.A02G060500' => 'ghi', 'Gohir.A05G133850' => 'ghi', 'Gohir.A05G161400' => 'ghi', 'Gohir.A06G012900' => 'ghi', 'Gohir.A06G035901' => 'ghi', 'Gohir.A06G127100' => 'ghi', 'Gohir.A06G210500' => 'ghi', 'Gohir.A08G008650' => 'ghi', 'Gohir.A09G072700' => 'ghi', 'Gohir.A09G088301' => 'ghi', 'Gohir.A10G040600' => 'ghi', 'Gohir.A12G036300' => 'ghi', 'Gohir.A12G143350' => 'ghi', 'Gohir.A12G165500' => 'ghi', 'Gohir.A13G145700' => 'ghi', 'Gohir.D01G050000' => 'ghi', 'Gohir.D01G051366' => 'ghi', 'Gohir.D01G161350' => 'ghi', 'Gohir.D02G065900' => 'ghi', 'Gohir.D05G164200' => 'ghi', 'Gohir.D05G355500' => 'ghi', 'Gohir.D06G010400' => 'ghi', 'Gohir.D06G111250' => 'ghi', 'Gohir.D06G132000' => 'ghi', 'Gohir.D06G210500' => 'ghi', 'Gohir.D07G165675' => 'ghi', 'Gohir.D08G062240' => 'ghi', 'Gohir.D08G086101' => 'ghi', 'Gohir.D08G138060' => 'ghi', 'Gohir.D09G072300' => 'ghi', 'Gohir.D10G041400' => 'ghi', 'Gohir.D11G191020' => 'ghi', 'Gohir.D11G212066' => 'ghi', 'Gohir.D12G036300' => 'ghi', 'Gohir.D12G168600' => 'ghi', 'Gohir.D13G150600' => 'ghi', 'Gorai.001G057300' => 'gra', 'Gorai.002G069900' => 'gra', 'Gorai.002G200000' => 'gra', 'Gorai.003G067600' => 'gra', 'Gorai.005G074800' => 'gra', 'Gorai.006G087300' => 'gra', 'Gorai.008G037500' => 'gra', 'Gorai.008G181400' => 'gra', 'Gorai.009G169400' => 'gra', 'Gorai.009G387900' => 'gra', 'Gorai.010G013300' => 'gra', 'Gorai.010G153800' => 'gra', 'Gorai.010G255800' => 'gra', 'Gorai.011G043700' => 'gra', 'Gorai.011G198900' => 'gra', 'Gorai.013G168400' => 'gra', 'GSVIVG01005212001' => 'vvi', 'GSVIVG01006163001' => 'vvi', 'GSVIVG01009625001' => 'vvi', 'GSVIVG01014338001' => 'vvi', 'GSVIVG01020005001' => 'vvi', 'GSVIVG01021450001' => 'vvi', 'GSVIVG01023975001' => 'vvi', 'GSVIVG01034490001' => 'vvi', 'HanXRQChr04g0112071' => 'han', 'HanXRQChr05g0131151' => 'han', 'HanXRQChr09g0262371' => 'han', 'HanXRQChr09g0268401' => 'han', 'HanXRQChr10g0279241' => 'han', 'HanXRQChr10g0297961' => 'han', 'HanXRQChr11g0326231' => 'han', 'HanXRQChr11g0328471' => 'han', 'HanXRQChr16g0507941' => 'han', 'HanXRQChr17g0560211' => 'han', 'Haze_02108' => 'cav', 'Haze_02428' => 'cav', 'Haze_05593' => 'cav', 'Haze_06448' => 'cav', 'Haze_09427' => 'cav', 'Haze_12022' => 'cav', 'Haze_17612' => 'cav', 'Haze_17928' => 'cav', 'Hma1.2p1_0032F.1_g019250' => 'hma', 'Hma1.2p1_0163F.1_g072690' => 'hma', 'Hma1.2p1_0265F.1_g106710' => 'hma', 'Hma1.2p1_0286F.1_g113970' => 'hma', 'Hma1.2p1_0363F.1_g136640' => 'hma', 'Hma1.2p1_0584F.1_g183470' => 'hma', 'Hma1.2p1_0885F.1_g232570' => 'hma', 'HPP92_006022' => 'vpl', 'HPP92_007320' => 'vpl', 'HPP92_011521' => 'vpl', 'HPP92_019387' => 'vpl', 'HPP92_024038' => 'vpl', 'Hund05891' => 'sun', 'Hund06450' => 'sun', 'Hund12053' => 'sun', 'Hund16800' => 'sun', 'Hund21222' => 'sun', 'Hund22896' => 'sun', 'Hund23746' => 'sun', 'Hund27083' => 'sun', 'Lalb_Chr02g0141831' => 'lal', 'Lalb_Chr02g0141841' => 'lal', 'Lalb_Chr05g0220411' => 'lal', 'Lalb_Chr06g0162081' => 'lal', 'Lalb_Chr09g0327651' => 'lal', 'Lalb_Chr13g0295051' => 'lal', 'Lalb_Chr15g0086801' => 'lal', 'Lalb_Chr16g0383781' => 'lal', 'Lalb_Chr16g0383791' => 'lal', 'Lalb_Chr18g0055441' => 'lal', 'Lalb_Chr18g0059611' => 'lal', 'Lalb_Chr20g0109661' => 'lal', 'Lalb_Chr20g0109831' => 'lal', 'Lalb_Chr20g0121871' => 'lal', 'Lalb_Chr22g0355361' => 'lal', 'Lalb_Chr25g0286371' => 'lal', 'Lj1A1187G43' => 'lonja', 'Lj1A1205T50' => 'lonja', 'Lj1A800G33' => 'lonja', 'Lj1C1187T7' => 'lonja', 'Lj1C843T11' => 'lonja', 'Lj1g0010940' => 'lja', 'Lj2A288T69' => 'lonja', 'Lj3g0024276' => 'lja', 'Lj4A47T76' => 'lonja', 'Lj4g0005805' => 'lja', 'Lj4g0006097' => 'lja', 'Lj4g0008528' => 'lja', 'Lj4g0024907' => 'lja', 'Lj5g0012472' => 'lja', 'Lj5g0018648' => 'lja', 'Lj6C789G1' => 'lonja', 'Lj6g0004000' => 'lja', 'Lj7A292G67' => 'lonja', 'Lj7A292T64' => 'lonja', 'Lj9A400T58' => 'lonja', 'Lsat_1_v5_gn_1_126181' => 'lsa', 'Lsat_1_v5_gn_4_123041' => 'lsa', 'Lsat_1_v5_gn_4_133620' => 'lsa', 'Lsat_1_v5_gn_4_53221' => 'lsa', 'Lsat_1_v5_gn_4_71961' => 'lsa', 'Lsat_1_v5_gn_7_105241' => 'lsa', 'Lsat_1_v5_gn_7_21361' => 'lsa', 'Lsat_1_v5_gn_7_28860' => 'lsa', 'Lsat_1_v5_gn_7_31260' => 'lsa', 'Lsat_1_v5_gn_8_52801' => 'lsa', 'Manes.02G191400' => 'mes', 'Manes.03G110100' => 'mes', 'Manes.04G071100' => 'mes', 'Manes.05G100500' => 'mes', 'Manes.05G164700' => 'mes', 'Manes.15G087000' => 'mes', 'Manes.15G121500' => 'mes', 'Manes.16G028300' => 'mes', 'Manes.17G046100' => 'mes', 'Manes.17G069800' => 'mes', 'Manes.18G100500' => 'mes', 'Mapoly0002s0109' => 'mpo', 'Mapoly0024s0007' => 'mpo', 'Mapoly0089s0032' => 'mpo', 'MBI04_g42241_MAGBIO' => 'mbi', 'MBI05_g11988_MAGBIO' => 'mbi', 'MBI05_g35452_MAGBIO' => 'mbi', 'MBI07_g30179_MAGBIO' => 'mbi', 'MBI07_g35859_MAGBIO' => 'mbi', 'MBI07_g35860_MAGBIO' => 'mbi', 'MBI07_g37166_MAGBIO' => 'mbi', 'MBI08_g18172_MAGBIO' => 'mbi', 'MBI09_g08441_MAGBIO' => 'mbi', 'MBI13_g01676_MAGBIO' => 'mbi', 'MBI14_g42955_MAGBIO' => 'mbi', 'MBI16_g13161_MAGBIO' => 'mbi', 'MBI17_g27204_MAGBIO' => 'mbi', 'MBI19_g21595_MAGBIO' => 'mbi', 'MD00G1148400' => 'mdo', 'MD02G1301200' => 'mdo', 'MD03G1227800' => 'mdo', 'MD05G1041100' => 'mdo', 'MD05G1124800' => 'mdo', 'MD05G1284000' => 'mdo', 'MD05G1338800' => 'mdo', 'MD05G1338900' => 'mdo', 'MD07G1022800' => 'mdo', 'MD10G1047500' => 'mdo', 'MD10G1127500' => 'mdo', 'MD10G1262300' => 'mdo', 'MD10G1293800' => 'mdo', 'MD16G1074300' => 'mdo', 'Medtr1g021670' => 'mtr', 'Medtr1g096320' => 'mtr', 'Medtr2g013690' => 'mtr', 'Medtr2g019450' => 'mtr', 'Medtr2g085170' => 'mtr', 'Medtr4g088785' => 'mtr', 'Medtr8g055930' => 'mtr', 'Medtr8g085850' => 'mtr', 'MELO3C002605.2' => 'cme', 'MELO3C003891.2' => 'cme', 'MELO3C004012.2' => 'cme', 'MELO3C007134.2' => 'cme', 'MELO3C008118.2' => 'cme', 'MELO3C016700.2' => 'cme', 'MELO3C024127.2' => 'cme', 'MELO3C033361.2' => 'cme', 'MELO3C033362.2' => 'cme', 'Migut.C00430' => 'egut', 'Migut.C01246' => 'egut', 'Migut.E00101' => 'egut', 'Migut.H01486' => 'egut', 'Migut.H01939' => 'egut', 'Migut.K00360' => 'egut', 'Migut.M00910' => 'egut', 'Migut.M01139' => 'egut', 'Migut.N02677' => 'egut', 'MSTRG.13252' => 'ama', 'MSTRG.14701' => 'ama', 'MSTRG.1521' => 'ama', 'MSTRG.15884' => 'ama', 'MSTRG.16242' => 'ama', 'MSTRG.22285' => 'ama', 'MSTRG.22444' => 'ama', 'MSTRG.2349' => 'ama', 'MSTRG.26308' => 'ama', 'MSTRG.28296' => 'ama', 'MSTRG.9895' => 'ama', 'Nitab4.5_0000110g0060' => 'nta', 'Nitab4.5_0000420g0130' => 'nta', 'Nitab4.5_0000422g0030' => 'nta', 'Nitab4.5_0000560g0180' => 'nta', 'Nitab4.5_0000703g0100' => 'nta', 'Nitab4.5_0000786g0200' => 'nta', 'Nitab4.5_0001336g0020' => 'nta', 'Nitab4.5_0001796g0030' => 'nta', 'Nitab4.5_0003348g0060' => 'nta', 'Nitab4.5_0003698g0040' => 'nta', 'Nitab4.5_0003942g0090' => 'nta', 'Nitab4.5_0004775g0070' => 'nta', 'Nitab4.5_0004864g0030' => 'nta', 'Nitab4.5_0005615g0020' => 'nta', 'Nitab4.5_0009288g0030' => 'nta', 'Nitab4.5_0009341g0010' => 'nta', 'Nitab4.5_0009535g0010' => 'nta', 'Nn1g03995' => 'nnu', 'Nn1g04100' => 'nnu', 'Nn1g06530' => 'nnu', 'Nn3g16404' => 'nnu', 'Nn3g17212' => 'nnu', 'Nn3g20776' => 'nnu', 'Nn3g21923' => 'nnu', 'Nn5g27737' => 'nnu', 'Nn5g29461' => 'nnu', 'Nn7g38355' => 'nnu', 'Nn8g39873' => 'nnu', 'Oeu000548.2' => 'oeu', 'Oeu004672.1' => 'oeu', 'Oeu015605.2' => 'oeu', 'Oeu016092.1' => 'oeu', 'Oeu017879.3' => 'oeu', 'Oeu024910.1' => 'oeu', 'Oeu028965.1' => 'oeu', 'Oeu031269.1' => 'oeu', 'Oeu031270.1' => 'oeu', 'Oeu032535.1' => 'oeu', 'Oeu034151.1' => 'oeu', 'Oeu034152.1' => 'oeu', 'Oeu034588.2' => 'oeu', 'Oeu050846.1' => 'oeu', 'Oeu050849.2' => 'oeu', 'Oeu051063.2' => 'oeu', 'Oeu052368.1' => 'oeu', 'Oeu052370.1' => 'oeu', 'Os01g0210400' => 'osa', 'Os01g0304300' => 'osa', 'Os01g0749100' => 'osa', 'Os02g0745800' => 'osa', 'Os03g0769050' => 'osa', 'Os05g0531500' => 'osa', 'Os06g0724300' => 'osa', 'Os11g0198100' => 'osa', 'Peaxi162Scf00069g01425' => 'pax', 'Peaxi162Scf00280g00811' => 'pax', 'Peaxi162Scf00310g00615' => 'pax', 'Peaxi162Scf00362g00542' => 'pax', 'Peaxi162Scf00461g00310' => 'pax', 'Peaxi162Scf00530g00118' => 'pax', 'Peaxi162Scf00541g00057' => 'pax', 'Peaxi162Scf00661g00017' => 'pax', 'Peaxi162Scf00926g00027' => 'pax', 'Peaxi162Scf01064g00263' => 'pax', 'Peaxi162Scf01211g00135' => 'pax', 'PGR004G2336' => 'pgr', 'PGR042G0327' => 'pgr', 'PGR042G1957' => 'pgr', 'PGR042G2003' => 'pgr', 'PGR042G3929' => 'pgr', 'PGR083G1137' => 'pgr', 'PGR083G1364' => 'pgr', 'PGSC0003DMG400003381' => 'stu', 'PGSC0003DMG400003417' => 'stu', 'PGSC0003DMG400008981' => 'stu', 'PGSC0003DMG400012417' => 'stu', 'PGSC0003DMG400012823' => 'stu', 'PGSC0003DMG400016885' => 'stu', 'PGSC0003DMG400022812' => 'stu', 'PGSC0003DMG400029726' => 'stu', 'PGSC0003DMG401009243' => 'stu', 'PGSC0003DMG401031505' => 'stu', 'PGSC0003DMG402031505' => 'stu', 'Phvul.001G017600' => 'pvu', 'Phvul.002G193500' => 'pvu', 'Phvul.002G228900' => 'pvu', 'Phvul.002G236800' => 'pvu', 'Phvul.003G049500' => 'pvu', 'Phvul.005G072000' => 'pvu', 'Phvul.006G164800' => 'pvu', 'Phvul.006G185100' => 'pvu', 'Phvul.007G090000' => 'pvu', 'Potri.001G399800' => 'ptr', 'Potri.002G149900' => 'ptr', 'Potri.004G044100' => 'ptr', 'Potri.004G177600' => 'ptr', 'Potri.009G138000' => 'ptr', 'Potri.010G094000' => 'ptr', 'Potri.011G053000' => 'ptr', 'Potri.011G119300' => 'ptr', 'Potri.013G113700' => 'ptr', 'Potri.018G107800' => 'ptr', 'Potri.019G084100' => 'ptr', 'Pp3c14_23720' => 'ppa', 'Pp3c16_6340' => 'ppa', 'Pp3c23_13420' => 'ppa', 'Pp3c24_2740' => 'ppa', 'Pp3c25_860' => 'ppa', 'Pp3c8_21750' => 'ppa', 'Prupe.1G273000' => 'ppe', 'Prupe.1G273700' => 'ppe', 'Prupe.1G274100' => 'ppe', 'Prupe.2G023300' => 'ppe', 'Prupe.4G048000' => 'ppe', 'Prupe.4G080400' => 'ppe', 'Prupe.4G181200' => 'ppe', 'Prupe.8G056900' => 'ppe', 'Prupe.8G168700' => 'ppe', 'Psat1g189080' => 'psa', 'Psat1g204760' => 'psa', 'Psat4g175560' => 'psa', 'Psat4g177720' => 'psa', 'Psat5g244240' => 'psa', 'Psat6g010720' => 'psa', 'Psat6g187200' => 'psa', 'Psat7g072040' => 'psa', 'PSO017G3501' => 'pso', 'PSO063G2148' => 'pso', 'PSO063G5608' => 'pso', 'PSO210G6392' => 'pso', 'PSO541G2319' => 'pso', 'PSO541G2836' => 'pso', 'PSO541G4012' => 'pso', 'PSO541G6253' => 'pso', 'PSO675G0580' => 'pso', 'PSO675G0856' => 'pso', 'PSO675G5635' => 'pso', 'PSO675G9157' => 'pso', 'PSO832G1660' => 'pso', 'PSO832G1969' => 'pso', 'QL02p007186' => 'qlo', 'QL02p033904' => 'qlo', 'QL03p064391' => 'qlo', 'QL05p040593' => 'qlo', 'QL05p058242' => 'qlo', 'QL08p021825' => 'qlo', 'QL11p004981' => 'qlo', 'RcHm_v2.0_Chr1g0318301' => 'rch', 'RcHm_v2.0_Chr4g0418501' => 'rch', 'RcHm_v2.0_Chr4g0439971' => 'rch', 'RcHm_v2.0_Chr5g0008541' => 'rch', 'RcHm_v2.0_Chr5g0014101' => 'rch', 'RcHm_v2.0_Chr5g0014131' => 'rch', 'RcHm_v2.0_Chr5g0033621' => 'rch', 'RcHm_v2.0_Chr6g0272041' => 'rch', 'RcHm_v2.0_Chr6g0278831' => 'rch', 'Rhsim02G0130400' => 'rsi', 'Rhsim02G0171100' => 'rsi', 'Rhsim05G0053000' => 'rsi', 'Rhsim05G0053100' => 'rsi', 'Rhsim06G0096500' => 'rsi', 'Rhsim06G0096600' => 'rsi', 'Rhsim06G0199100' => 'rsi', 'Rhsim12G0062300' => 'rsi', 'Rhsim12G0062800' => 'rsi', 'Sabra02G0118600' => 'sbr', 'Sabra04G0027300' => 'sbr', 'Sabra04G0119500' => 'sbr', 'Sabra08G0112500' => 'sbr', 'Sabra11G0036800' => 'sbr', 'Sabra11G0103800' => 'sbr', 'Sabra13G0096300' => 'sbr', 'Sabra16G0262300' => 'sbr', 'Sabra18G0091700' => 'sbr', 'Sabra19G0095400' => 'sbr', 'SalBow6G3080' => 'sbo', 'SalBow7G1157' => 'sbo', 'SalBow7G2123' => 'sbo', 'SalBow7G2285' => 'sbo', 'SalBow7G3537' => 'sbo', 'SalBow8G2947' => 'sbo', 'SalBow8G4463' => 'sbo', 'SalBow8G5466' => 'sbo', 'Sc01g0001750' => 'sci', 'Sc02g0006640' => 'sci', 'Sc02g0006670' => 'sci', 'Sc04g0008220' => 'sci', 'Sc05g0006190' => 'sci', 'Sc08g0002760' => 'sci', 'Sc17g0006170' => 'sci', 'Sc22g0002050' => 'sci', 'Sc23g0001190' => 'sci', 'Sc24g0000980' => 'sci', 'Sed0006245' => 'sed', 'Sed0007543' => 'sed', 'Sed0009411' => 'sed', 'Sed0010765' => 'sed', 'Sed0012944' => 'sed', 'Sed0014682' => 'sed', 'Sed0016174' => 'sed', 'Sed0016796' => 'sed', 'Sed0020317' => 'sed', 'Sed0021467' => 'sed', 'SEGI_01316' => 'sgi', 'SEGI_03374' => 'sgi', 'SEGI_16265' => 'sgi', 'SEGI_18569' => 'sgi', 'SEGI_20351' => 'sgi', 'SEGI_26395' => 'sgi', 'SEGI_29469' => 'sgi', 'SEGI_34771' => 'sgi', 'SEGI_36769' => 'sgi', 'SEGI_37139' => 'sgi', 'SGA_v2.0_scaffold100G29687' => 'sas', 'SGA_v2.0_scaffold118G32472' => 'sas', 'SGA_v2.0_scaffold14G07051' => 'sas', 'SGA_v2.0_scaffold183G39845' => 'sas', 'SGA_v2.0_scaffold1G00174' => 'sas', 'SGA_v2.0_scaffold22G09714' => 'sas', 'SGA_v2.0_scaffold333G48992' => 'sas', 'SGA_v2.0_scaffold46G17491' => 'sas', 'SGA_v2.0_scaffold49G18294' => 'sas', 'SGA_v2.0_scaffold63G21658' => 'sas', 'SHI01741' => 'shi', 'SHI05771' => 'shi', 'SHI18077' => 'shi', 'SHI20525' => 'shi', 'SHI20527' => 'shi', 'SHI20528' => 'shi', 'SMO172G0185' => 'smo', 'SMO198G0020' => 'smo', 'SMO351G0006' => 'smo', 'SMO356G0118' => 'smo', 'SMO358G0296' => 'smo', 'SMO367G0079' => 'smo', 'SMO367G1277' => 'smo', 'Solyc01g014220.3' => 'sly', 'Solyc01g111770.2' => 'sly', 'Solyc02g078180.3' => 'sly', 'Solyc03g006430.3' => 'sly', 'Solyc03g006456.1' => 'sly', 'Solyc03g079860.2' => 'sly', 'Solyc04g079770.3' => 'sly', 'Solyc05g007430.4' => 'sly', 'Solyc07g063150.3' => 'sly', 'Solyc08g016620.3' => 'sly', 'Solyc09g057590.3' => 'sly', 'Solyc09g057600.1' => 'sly', 'Solyc10g009050.3' => 'sly', 'Solyc11g017420.2' => 'sly', 'Sopen01g053810' => 'spe', 'Sopen02g023040' => 'spe', 'Sopen03g002440' => 'spe', 'Sopen04g033350' => 'spe', 'Sopen05g003310' => 'spe', 'Sopen07g004050' => 'spe', 'Sopen07g031340' => 'spe', 'Sopen08g006990' => 'spe', 'Sopen10g004830' => 'spe', 'Sopen11g009370' => 'spe', 'Sp1g24450' => 'spa', 'Sp1g29670' => 'spa', 'Sp1g39600' => 'spa', 'Sp2g11080' => 'spa', 'Sp2g13970' => 'spa', 'Sp4g16130' => 'spa', 'Sp6g13080' => 'spa', 'Sp7g37270' => 'spa', 'TAR371G0065' => 'tar', 'TAR376G0340' => 'tar', 'TAR376G0435' => 'tar', 'TAR381G0002' => 'tar', 'TAR381G1236' => 'tar', 'TAR624G0055' => 'tar', 'TAR624G0324' => 'tar', 'TAR624G0696' => 'tar', 'TAR624G0906' => 'tar', 'TAR625G0107' => 'tar', 'TAR626G0015' => 'tar', 'TAR626G1356' => 'tar', 'TAR627G0888' => 'tar', 'TAR628G0399' => 'tar', 'TAR628G1327' => 'tar', 'TAR629G2831' => 'tar', 'TAR629G2874' => 'tar', 'TAR633G1432' => 'tar', 'TAR633G2771' => 'tar', 'THA.LOC104803394' => 'tha', 'THA.LOC104805153' => 'tha', 'THA.LOC104806784' => 'tha', 'THA.LOC104810473' => 'tha', 'THA.LOC104813100' => 'tha', 'THA.LOC104814215' => 'tha', 'THA.LOC104815554' => 'tha', 'THA.LOC104820544' => 'tha', 'THA.LOC104824754' => 'tha', 'THA.LOC104827717' => 'tha', 'Thecc.02G031400' => 'tca', 'Thecc.02G055900' => 'tca', 'Thecc.02G350800' => 'tca', 'Thecc.06G150900' => 'tca', 'Thecc.06G186600' => 'tca', 'Thecc.07G089600' => 'tca', 'Thecc.08G020400' => 'tca', 'Thecc.08G182100' => 'tca', 'Thhalv10000873m.g' => 'esa', 'Thhalv10004185m.g' => 'esa', 'Thhalv10006981m.g' => 'esa', 'Thhalv10007204m.g' => 'esa', 'Thhalv10011374m.g' => 'esa', 'Thhalv10013482m.g' => 'esa', 'Thhalv10017801m.g' => 'esa', 'Thhalv10024983m.g' => 'esa', 'TPR.G12072' => 'tpr', 'TPR.G15769' => 'tpr', 'TPR.G16504' => 'tpr', 'TPR.G16506' => 'tpr', 'TPR.G24345' => 'tpr', 'TPR.G26666' => 'tpr', 'TPR.G27320' => 'tpr', 'TPR.G31819' => 'tpr', 'TPR.G38879' => 'tpr', 'TPR.G39015' => 'tpr', 'TPR.G8819' => 'tpr', 'TWI09G0924' => 'twi', 'TWI12G0811' => 'twi', 'TWI12G1294' => 'twi', 'TWI31G0150' => 'twi', 'TWI36G1262' => 'twi', 'TWI38G1287' => 'twi', 'TWI38G1633' => 'twi', 'TWI38G1982' => 'twi', 'TWI39G0116' => 'twi', 'TWI60G1011' => 'twi', 'TWI63G0171' => 'twi', 'TWI73G0839' => 'twi', 'TWI79G1511' => 'twi', 'unitig_0.g915' => 'ugi', 'unitig_0.g916' => 'ugi', 'unitig_21.g20219' => 'ugi', 'unitig_21.g20416' => 'ugi', 'unitig_578.g16132' => 'ugi', 'unitig_578.g16718' => 'ugi', 'unitig_62.g23481' => 'ugi', 'unitig_744.g24535' => 'ugi', 'unitig_749.g13525' => 'ugi', 'vmacro01248' => 'vma', 'vmacro02290' => 'vma', 'vmacro10946' => 'vma', 'vmacro11865' => 'vma', 'vmacro12493' => 'vma', 'vmacro17322' => 'vma', 'vmacro21599' => 'vma', 'vmacro23041' => 'vma', 'VMungo0251G0004' => 'vmu', 'VMungo0251G2639' => 'vmu', 'VMungo0251G2967' => 'vmu', 'VMungo0540G0864' => 'vmu', 'VMungo0540G1569' => 'vmu', 'VMungo0647G0317' => 'vmu', 'VMungo0720G1373' => 'vmu', 'VMungo0720G1508' => 'vmu', 'VMungo1080G0485' => 'vmu', 'VMungo1215G3177' => 'vmu', 'Zm00001eb112600' => 'zma', 'Zm00001eb120220' => 'zma', 'Zm00001eb153240' => 'zma', 'Zm00001eb168880' => 'zma', 'Zm00001eb213920' => 'zma', 'Zm00001eb228280' => 'zma', 'Zm00001eb254580' => 'zma', 'Zm00001eb272180' => 'zma', 'Zm00001eb293190' => 'zma', 'Zm00001eb322930' => 'zma', 'Zm00001eb353360' => 'zma', 'Zm00001eb353390' => 'zma', 'Zm00001eb353430' => 'zma', 'Zm00001eb353440' => 'zma', 'Zm00001eb353780' => 'zma' ) $gf_id = 'HOM05D000499' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000499' ) $data_identifier = 'HOM05D000499' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 29, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 12, 'amhyb' => (int) 8, 'aly' => (int) 12, 'aox' => (int) 9, 'arhy' => (int) 26, 'ath' => (int) 8, 'atr' => (int) 7, 'acertr' => (int) 10, 'cqu' => (int) 15, 'bca' => (int) 29, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 11, 'cansat' => (int) 8, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 9, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 8, 'cpa' => (int) 10, 'csa' => (int) 7, 'camsi' => (int) 20, 'dca' => (int) 8, 'din' => (int) 12, 'dzi' => (int) 14, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 6, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 38, 'gra' => (int) 16, 'vvi' => (int) 8, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 5, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 11, 'lja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 11, 'mpo' => (int) 3, 'mbi' => (int) 14, 'mdo' => (int) 14, 'mtr' => (int) 8, 'cme' => (int) 9, 'egut' => (int) 9, 'ama' => (int) 11, 'nta' => (int) 17, 'nnu' => (int) 11, 'oeu' => (int) 18, 'osa' => (int) 8, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 6, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 9, 'rsi' => (int) 9, 'sbr' => (int) 10, 'sbo' => (int) 8, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 10, 'sas' => (int) 10, 'shi' => (int) 6, 'smo' => (int) 7, 'sly' => (int) 14, 'spe' => (int) 10, 'spa' => (int) 8, 'tar' => (int) 19, 'tha' => (int) 10, 'tca' => (int) 8, 'esa' => (int) 8, 'tpr' => (int) 11, 'twi' => (int) 13, 'ugi' => (int) 9, 'vma' => (int) 8, 'vmu' => (int) 10, 'zma' => (int) 15 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb353780' $species_info = array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ) $local_species = 'cde' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000499', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1066', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p29780' => 'bna', 'A02p33180' => 'bna', 'A03p16470' => 'bna', 'A03p66010' => 'bna', 'A04p25970' => 'bna', 'A06p01270' => 'bna', 'A06p46080' => 'bna', 'A07p11400' => 'bna', 'A08p01840' => 'bna', 'A08p08230' => 'bna', 'A08p25740' => 'bna', 'A09p32070' => 'bna', 'A09p37830' => 'bna', 'A09p42840' => 'bna', 'A09p42850' => 'bna', 'Aa31LG10G2060' => 'aar', 'Aa31LG2G7410' => 'aar', 'Aa31LG6G10200' => 'aar', 'Aa31LG6G16680' => 'aar', 'Aa31LG6G8470' => 'aar', 'Aa31LG9G12730' => 'aar', 'Aa31LG9G13680' => 'aar', 'Aa31LG9G14920' => 'aar', 'Aa31LG9G6650' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4977' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5467' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3254' => 'aag', 'Actinidia02578' => 'ach', 'Actinidia07693' => 'ach', 'Actinidia08413' => 'ach', 'Actinidia08414' => 'ach', 'Actinidia15289' => 'ach', 'Actinidia19871' => 'ach', 'Actinidia21475' => 'ach', 'Actinidia22576' => 'ach', 'Actinidia28327' => 'ach', 'Actinidia32491' => 'ach', 'Actinidia39463' => 'ach', 'Actinidia39571' => 'ach', 'Ah.01g013750' => 'amhyb', 'Ah.01g023210' => 'amhyb', 'Ah.04g164850' => 'amhyb', 'Ah.05g178060' => 'amhyb', 'Ah.07g204270' => 'amhyb', 'Ah.07g208480' => 'amhyb', 'Ah.09g237410' => 'amhyb', 'Ah.14g089460' => 'amhyb', 'AL1G41790' => 'aly', 'AL1G49050' => 'aly', 'AL1G53810' => 'aly', 'AL1G61400' => 'aly', 'AL4G18580' => 'aly', 'AL5G12510' => 'aly', 'AL5G12540' => 'aly', 'AL6G43230' => 'aly', 'AL7G10370' => 'aly', 'AL7G19250' => 'aly', 'AL8G12240' => 'aly', 'AL8G18540' => 'aly', 'Aqoxy1G02409' => 'aox', 'Aqoxy2G03993' => 'aox', 'Aqoxy3G03357' => 'aox', 'Aqoxy4G00785' => 'aox', 'Aqoxy5G02598' => 'aox', 'Aqoxy6G00132' => 'aox', 'Aqoxy7G01776' => 'aox', 'Aqoxy7G02316' => 'aox', 'Aqoxy7G03973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.12AFKW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B8730' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27IQR1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3F75VG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3RE0GA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41TCQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.527VTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FIR39' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5W8UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DA38EV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ63HS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H1I32C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HC27T5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4M8AP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7N3CZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9UVDZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LS1NQA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT1D4B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SKC4TM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCFV76' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF9Q1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQWD9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1ZM88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WE07RT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YCK7VH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJE6Q6' => 'arhy', 'AT1G28240' => 'ath', 'AT1G34550' => 'ath', 'AT1G53040' => 'ath', 'AT2G02910' => 'ath', 'AT4G09630' => 'ath', 'AT4G38500' => 'ath', 'AT5G42660' => 'ath', 'AT5G46220' => 'ath', 'ATR0152G026' => 'atr', 'ATR0564G343' => 'atr', 'ATR0706G151' => 'atr', 'ATR0733G207' => 'atr', 'ATR0751G234' => 'atr', 'ATR0807G048' => 'atr', 'ATR1091G084' => 'atr', 'Atru.chr10.1229' => 'acertr', 'Atru.chr10.1230' => 'acertr', 'Atru.chr10.1874' => 'acertr', 'Atru.chr11.1808' => 'acertr', 'Atru.chr13.1795' => 'acertr', 'Atru.chr13.570' => 'acertr', 'Atru.chr2.2608' => 'acertr', 'Atru.chr2.2609' => 'acertr', 'Atru.chr5.3428' => 'acertr', 'Atru.chr8.1171' => 'acertr', 'AUR62004651' => 'cqu', 'AUR62008675' => 'cqu', 'AUR62010014' => 'cqu', 'AUR62013004' => 'cqu', 'AUR62014825' => 'cqu', 'AUR62015015' => 'cqu', 'AUR62015151' => 'cqu', 'AUR62017020' => 'cqu', 'AUR62019422' => 'cqu', 'AUR62023570' => 'cqu', 'AUR62025571' => 'cqu', 'AUR62029098' => 'cqu', 'AUR62033863' => 'cqu', 'AUR62034296' => 'cqu', 'AUR62040075' => 'cqu', 'BcaB02g07334' => 'bca', 'BcaB02g10575' => 'bca', 'BcaB03g12119' => 'bca', 'BcaB03g12120' => 'bca', 'BcaB03g13945' => 'bca', 'BcaB04g17123' => 'bca', 'BcaB04g17867' => 'bca', 'BcaB04g19839' => 'bca', 'BcaB07g30317' => 'bca', 'BcaB07g32432' => 'bca', 'BcaB07g33362' => 'bca', 'BcaB08g36611' => 'bca', 'BcaC01g00028' => 'bca', 'BcaC01g01356' => 'bca', 'BcaC01g02034' => 'bca', 'BcaC01g06051' => 'bca', 'BcaC03g16839' => 'bca', 'BcaC03g17176' => 'bca', 'BcaC05g26829' => 'bca', 'BcaC06g31490' => 'bca', 'BcaC06g35344' => 'bca', 'BcaC06g36570' => 'bca', 'BcaC07g37537' => 'bca', 'BcaC08g43491' => 'bca', 'BcaC08g43773' => 'bca', 'BcaNung00234' => 'bca', 'BcaNung01982' => 'bca', 'BcaNung03707' => 'bca', 'BcaNung06454' => 'bca', 'BolC2t10762H' => 'bol', 'BolC2t11191H' => 'bol', 'BolC3t14322H' => 'bol', 'BolC3t19747H' => 'bol', 'BolC3t21425H' => 'bol', 'BolC4t27800H' => 'bol', 'BolC5t31423H' => 'bol', 'BolC6t35951H' => 'bol', 'BolC6t36282H' => 'bol', 'BolC7t40678H' => 'bol', 'BolC7t40679H' => 'bol', 'BolC7t42222H' => 'bol', 'BolC7t43492H' => 'bol', 'BolC7t46785H' => 'bol', 'BolC8t47853H' => 'bol', 'BolC9t56805H' => 'bol', 'BraA02t08000Z' => 'bra', 'BraA02t08341Z' => 'bra', 'BraA03t10936Z' => 'bra', 'BraA03t15657Z' => 'bra', 'BraA04t18100Z' => 'bra', 'BraA05t20523Z' => 'bra', 'BraA06t23353Z' => 'bra', 'BraA06t27473Z' => 'bra', 'BraA06t27769Z' => 'bra', 'BraA07t28928Z' => 'bra', 'BraA08t32236Z' => 'bra', 'BraA08t32841Z' => 'bra', 'BraA08t34524Z' => 'bra', 'BraA09t38742Z' => 'bra', 'BraA09t39295Z' => 'bra', 'C02p47180' => 'bna', 'C02p50990' => 'bna', 'C03p19360' => 'bna', 'C03p74950' => 'bna', 'C03p91000' => 'bna', 'C04p63260' => 'bna', 'C05p27050' => 'bna', 'C06p08750' => 'bna', 'C06p11490' => 'bna', 'C07p02820' => 'bna', 'C07p17180' => 'bna', 'C07p29440' => 'bna', 'C07p63730' => 'bna', 'C09p39260' => 'bna', 'CAN.G1164.34' => 'can', 'CAN.G1164.39' => 'can', 'CAN.G1530.3' => 'can', 'CAN.G162.61' => 'can', 'CAN.G176.6' => 'can', 'CAN.G289.49' => 'can', 'CAN.G370.21' => 'can', 'CAN.G370.22' => 'can', 'CAN.G371.117' => 'can', 'CAN.G58.37' => 'can', 'CAN.G588.98' => 'can', 'CANSAT21G2266' => 'cansat', 'CANSAT25G2799' => 'cansat', 'CANSAT35G0862' => 'cansat', 'CANSAT35G1704' => 'cansat', 'CANSAT35G1760' => 'cansat', 'CANSAT56G3971' => 'cansat', 'CANSAT56G4116' => 'cansat', 'CANSAT80G1259' => 'cansat', 'CARHR027730' => 'chi', 'CARHR033880' => 'chi', 'CARHR043270' => 'chi', 'CARHR145330' => 'chi', 'CARHR145340' => 'chi', 'CARHR175570' => 'chi', 'CARHR181570' => 'chi', 'CARHR258470' => 'chi', 'CARHR260490' => 'chi', 'CARHR294220' => 'chi', 'Carub.0001s2668' => 'cru', 'Carub.0001s3257' => 'cru', 'Carub.0001s4220' => 'cru', 'Carub.0005s0179' => 'cru', 'Carub.0006s2807' => 'cru', 'Carub.0007s0039' => 'cru', 'Carub.0008s0169' => 'cru', 'Carub.0008s0636' => 'cru', 'Ca_00338_v3' => 'car', 'Ca_00542_v3' => 'car', 'Ca_01844_v3' => 'car', 'Ca_10611_v3' => 'car', 'Ca_13326_v3' => 'car', 'Ca_17944_v3' => 'car', 'Ca_18546_v3' => 'car', 'Ca_24219_v3' => 'car', 'Ca_29972_v3' => 'car', 'CBR_g3681' => 'cbr', 'CBR_g40021' => 'cbr', 'Cc01_g08140' => 'ccan', 'Cc02_g13410' => 'ccan', 'Cc02_g37480' => 'ccan', 'Cc05_g12030' => 'ccan', 'Cc09_g03370' => 'ccan', 'Cc09_g10300' => 'ccan', 'Cc10_g03530' => 'ccan', 'Cc10_g11380' => 'ccan', 'CDE01G0176' => 'cde', 'CDE02G0675' => 'cde', 'CDE02G0942' => 'cde', 'CDE02G1153' => 'cde', 'CDE02G4177' => 'cde', 'CDE04G2117' => 'cde', 'CDE04G2736' => 'cde', 'CDE08G1161' => 'cde', 'CDE09G1238' => 'cde', 'Cfa000467' => 'cfa', 'Cfa000947' => 'cfa', 'Cfa004969' => 'cfa', 'Cfa005284' => 'cfa', 'Cfa008993' => 'cfa', 'Cfa018187' => 'cfa', 'Cfa018454' => 'cfa', 'Cfa020585' => 'cfa', 'Ciclev10000424m.g' => 'ccl', 'Ciclev10003605m.g' => 'ccl', 'Ciclev10007828m.g' => 'ccl', 'Ciclev10014620m.g' => 'ccl', 'Ciclev10015169m.g' => 'ccl', 'Ciclev10018291m.g' => 'ccl', 'Ciclev10028256m.g' => 'ccl', 'Ciclev10033822m.g' => 'ccl', 'CiPaw.05G060300' => 'cil', 'CiPaw.05G085000' => 'cil', 'CiPaw.06G083700' => 'cil', 'CiPaw.06G120300' => 'cil', 'CiPaw.09G060500' => 'cil', 'CiPaw.09G123800' => 'cil', 'CiPaw.11G169700' => 'cil', 'CiPaw.12G118300' => 'cil', 'CiPaw.15G071000' => 'cil', 'CiPaw.15G081900' => 'cil', 'ClCG01G024610' => 'cla', 'ClCG03G006070' => 'cla', 'ClCG05G019250' => 'cla', 'ClCG09G009500' => 'cla', 'ClCG11G008200' => 'cla', 'ClCG11G018080' => 'cla', 'COL.COLO4_17373' => 'col', 'COL.COLO4_22994' => 'col', 'COL.COLO4_26389' => 'col', 'COL.COLO4_27170' => 'col', 'COL.COLO4_31074' => 'col', 'COL.COLO4_31465' => 'col', 'COL.COLO4_36438' => 'col', 'COL.COLO4_36439' => 'col', 'Cpa.g.c38781' => 'cpa', 'Cpa.g.sc128.12' => 'cpa', 'Cpa.g.sc166.7' => 'cpa', 'Cpa.g.sc166.8' => 'cpa', 'Cpa.g.sc20.111' => 'cpa', 'Cpa.g.sc27.31' => 'cpa', 'Cpa.g.sc64.36' => 'cpa', 'Cpa.g.sc64.37' => 'cpa', 'Cpa.g.sc66.49' => 'cpa', 'Cpa.g.sc80.64' => 'cpa', 'CsaV3_1G012320' => 'csa', 'CsaV3_2G008480' => 'csa', 'CsaV3_2G033450' => 'csa', 'CsaV3_3G044830' => 'csa', 'CsaV3_4G033710' => 'csa', 'CsaV3_6G051730' => 'csa', 'CsaV3_7G025350' => 'csa', 'CSS0001067' => 'camsi', 'CSS0005996' => 'camsi', 'CSS0006590' => 'camsi', 'CSS0009673' => 'camsi', 'CSS0010201' => 'camsi', 'CSS0010549' => 'camsi', 'CSS0011364' => 'camsi', 'CSS0014473' => 'camsi', 'CSS0014961' => 'camsi', 'CSS0020191' => 'camsi', 'CSS0021165' => 'camsi', 'CSS0022306' => 'camsi', 'CSS0030591' => 'camsi', 'CSS0030696' => 'camsi', 'CSS0032653' => 'camsi', 'CSS0037487' => 'camsi', 'CSS0041102' => 'camsi', 'CSS0041261' => 'camsi', 'CSS0046246' => 'camsi', 'CSS0049256' => 'camsi', 'DCAR_004075' => 'dca', 'DCAR_011538' => 'dca', 'DCAR_019553' => 'dca', 'DCAR_020952' => 'dca', 'DCAR_021739' => 'dca', 'DCAR_027407' => 'dca', 'DCAR_027913' => 'dca', 'DCAR_028066' => 'dca', 'Dinv05899' => 'din', 'Dinv07563' => 'din', 'Dinv08010' => 'din', 'Dinv14125' => 'din', 'Dinv20172' => 'din', 'Dinv30743' => 'din', 'Dinv31229' => 'din', 'Dinv34162' => 'din', 'Dinv36028' => 'din', 'Dinv39368' => 'din', 'Dinv40565' => 'din', 'Dinv41706' => 'din', 'Duzib052G0089' => 'dzi', 'Duzib116G0641' => 'dzi', 'Duzib132G0069' => 'dzi', 'Duzib132G1219' => 'dzi', 'Duzib147G0278' => 'dzi', 'Duzib160G0480' => 'dzi', 'Duzib170G0661' => 'dzi', 'Duzib177G0591' => 'dzi', 'Duzib187G1353' => 'dzi', 'Duzib192G0858' => 'dzi', 'Duzib192G0883' => 'dzi', 'Duzib213G0506' => 'dzi', 'Duzib235G0289' => 'dzi', 'Duzib251G0422' => 'dzi', 'ECA232G3898' => 'eca', 'ECA233G5950' => 'eca', 'ECA234G1699' => 'eca', 'ECA234G2421' => 'eca', 'ECA236G0426' => 'eca', 'ECA236G4331' => 'eca', 'ECA248G2573' => 'eca', 'EL10Ac1g00077' => 'bvu', 'EL10Ac1g01746' => 'bvu', 'EL10Ac2g03464' => 'bvu', 'EL10Ac4g08176' => 'bvu', 'EL10Ac7g17521' => 'bvu', 'EL10Ac8g20386' => 'bvu', 'EL10Ac9g21343' => 'bvu', 'EL10Ac9g22688' => 'bvu', 'Eucgr.B03434' => 'egr', 'Eucgr.D00618' => 'egr', 'Eucgr.E02395' => 'egr', 'Eucgr.F01129' => 'egr', 'Eucgr.F02622' => 'egr', 'Eucgr.F04207' => 'egr', 'FAN01G0570' => 'fan', 'FAN03G3351' => 'fan', 'FAN06G3702' => 'fan', 'FAN07G2149' => 'fan', 'FAN10G3758' => 'fan', 'FAN11G1170' => 'fan', 'FAN11G2050' => 'fan', 'FAN11G2724' => 'fan', 'FAN12G1700' => 'fan', 'FAN12G2028' => 'fan', 'FAN15G1160' => 'fan', 'FAN15G3063' => 'fan', 'FAN16G2540' => 'fan', 'FAN16G3077' => 'fan', 'FAN16G3624' => 'fan', 'FAN17G0221' => 'fan', 'FAN20G2492' => 'fan', 'FAN20G2905' => 'fan', 'FAN21G0548' => 'fan', 'FAN21G1300' => 'fan', 'FAN22G0077' => 'fan', 'FAN22G1315' => 'fan', 'FAN24G1280' => 'fan', 'FAN24G1445' => 'fan', 'FAN24G3527' => 'fan', 'FAN25G0464' => 'fan', 'FAN25G2885' => 'fan', 'FAN25G3270' => 'fan', 'FAN27G1101' => 'fan', 'FAN27G2846' => 'fan', 'FAN27G3524' => 'fan', 'FvH4_2g11770' => 'fve', 'FvH4_2g15630' => 'fve', 'FvH4_3g05570' => 'fve', 'FvH4_3g09110' => 'fve', 'FvH4_3g19940' => 'fve', 'FvH4_4g04821' => 'fve', 'FvH4_4g31480' => 'fve', 'FvH4_7g01740' => 'fve', 'Glyma.05G130400' => 'gma', 'Glyma.05G156400' => 'gma', 'Glyma.07G197000' => 'gma', 'Glyma.08G085151' => 'gma', 'Glyma.08G114500' => 'gma', 'Glyma.08G300400' => 'gma', 'Glyma.10G215800' => 'gma', 'Glyma.12G224400' => 'gma', 'Glyma.13G179300' => 'gma', 'Glyma.13G218151' => 'gma', 'Glyma.13G238800' => 'gma', 'Glyma.13G276900' => 'gma', 'Glyma.14G078200' => 'gma', 'Glyma.15G074500' => 'gma', 'Glyma.15G094100' => 'gma', 'Glyma.17G247200' => 'gma', 'Glyma.18G120100' => 'gma', 'Glyma.20G176000' => 'gma', 'Gohir.A01G063600' => 'ghi', 'Gohir.A01G170301' => 'ghi', 'Gohir.A02G060500' => 'ghi', 'Gohir.A05G133850' => 'ghi', 'Gohir.A05G161400' => 'ghi', 'Gohir.A06G012900' => 'ghi', 'Gohir.A06G035901' => 'ghi', 'Gohir.A06G127100' => 'ghi', 'Gohir.A06G210500' => 'ghi', 'Gohir.A08G008650' => 'ghi', 'Gohir.A09G072700' => 'ghi', 'Gohir.A09G088301' => 'ghi', 'Gohir.A10G040600' => 'ghi', 'Gohir.A12G036300' => 'ghi', 'Gohir.A12G143350' => 'ghi', 'Gohir.A12G165500' => 'ghi', 'Gohir.A13G145700' => 'ghi', 'Gohir.D01G050000' => 'ghi', 'Gohir.D01G051366' => 'ghi', 'Gohir.D01G161350' => 'ghi', 'Gohir.D02G065900' => 'ghi', 'Gohir.D05G164200' => 'ghi', 'Gohir.D05G355500' => 'ghi', 'Gohir.D06G010400' => 'ghi', 'Gohir.D06G111250' => 'ghi', 'Gohir.D06G132000' => 'ghi', 'Gohir.D06G210500' => 'ghi', 'Gohir.D07G165675' => 'ghi', 'Gohir.D08G062240' => 'ghi', 'Gohir.D08G086101' => 'ghi', 'Gohir.D08G138060' => 'ghi', 'Gohir.D09G072300' => 'ghi', 'Gohir.D10G041400' => 'ghi', 'Gohir.D11G191020' => 'ghi', 'Gohir.D11G212066' => 'ghi', 'Gohir.D12G036300' => 'ghi', 'Gohir.D12G168600' => 'ghi', 'Gohir.D13G150600' => 'ghi', 'Gorai.001G057300' => 'gra', 'Gorai.002G069900' => 'gra', 'Gorai.002G200000' => 'gra', 'Gorai.003G067600' => 'gra', 'Gorai.005G074800' => 'gra', 'Gorai.006G087300' => 'gra', 'Gorai.008G037500' => 'gra', 'Gorai.008G181400' => 'gra', 'Gorai.009G169400' => 'gra', 'Gorai.009G387900' => 'gra', 'Gorai.010G013300' => 'gra', 'Gorai.010G153800' => 'gra', 'Gorai.010G255800' => 'gra', 'Gorai.011G043700' => 'gra', 'Gorai.011G198900' => 'gra', 'Gorai.013G168400' => 'gra', 'GSVIVG01005212001' => 'vvi', 'GSVIVG01006163001' => 'vvi', 'GSVIVG01009625001' => 'vvi', 'GSVIVG01014338001' => 'vvi', 'GSVIVG01020005001' => 'vvi', 'GSVIVG01021450001' => 'vvi', 'GSVIVG01023975001' => 'vvi', 'GSVIVG01034490001' => 'vvi', 'HanXRQChr04g0112071' => 'han', 'HanXRQChr05g0131151' => 'han', 'HanXRQChr09g0262371' => 'han', 'HanXRQChr09g0268401' => 'han', 'HanXRQChr10g0279241' => 'han', 'HanXRQChr10g0297961' => 'han', 'HanXRQChr11g0326231' => 'han', 'HanXRQChr11g0328471' => 'han', 'HanXRQChr16g0507941' => 'han', 'HanXRQChr17g0560211' => 'han', 'Haze_02108' => 'cav', 'Haze_02428' => 'cav', 'Haze_05593' => 'cav', 'Haze_06448' => 'cav', 'Haze_09427' => 'cav', 'Haze_12022' => 'cav', 'Haze_17612' => 'cav', 'Haze_17928' => 'cav', 'Hma1.2p1_0032F.1_g019250' => 'hma', 'Hma1.2p1_0163F.1_g072690' => 'hma', 'Hma1.2p1_0265F.1_g106710' => 'hma', 'Hma1.2p1_0286F.1_g113970' => 'hma', 'Hma1.2p1_0363F.1_g136640' => 'hma', 'Hma1.2p1_0584F.1_g183470' => 'hma', 'Hma1.2p1_0885F.1_g232570' => 'hma', 'HPP92_006022' => 'vpl', 'HPP92_007320' => 'vpl', 'HPP92_011521' => 'vpl', 'HPP92_019387' => 'vpl', 'HPP92_024038' => 'vpl', 'Hund05891' => 'sun', 'Hund06450' => 'sun', 'Hund12053' => 'sun', 'Hund16800' => 'sun', 'Hund21222' => 'sun', 'Hund22896' => 'sun', 'Hund23746' => 'sun', 'Hund27083' => 'sun', 'Lalb_Chr02g0141831' => 'lal', 'Lalb_Chr02g0141841' => 'lal', 'Lalb_Chr05g0220411' => 'lal', 'Lalb_Chr06g0162081' => 'lal', 'Lalb_Chr09g0327651' => 'lal', 'Lalb_Chr13g0295051' => 'lal', 'Lalb_Chr15g0086801' => 'lal', 'Lalb_Chr16g0383781' => 'lal', 'Lalb_Chr16g0383791' => 'lal', 'Lalb_Chr18g0055441' => 'lal', 'Lalb_Chr18g0059611' => 'lal', 'Lalb_Chr20g0109661' => 'lal', 'Lalb_Chr20g0109831' => 'lal', 'Lalb_Chr20g0121871' => 'lal', 'Lalb_Chr22g0355361' => 'lal', 'Lalb_Chr25g0286371' => 'lal', 'Lj1A1187G43' => 'lonja', 'Lj1A1205T50' => 'lonja', 'Lj1A800G33' => 'lonja', 'Lj1C1187T7' => 'lonja', 'Lj1C843T11' => 'lonja', 'Lj1g0010940' => 'lja', 'Lj2A288T69' => 'lonja', 'Lj3g0024276' => 'lja', 'Lj4A47T76' => 'lonja', 'Lj4g0005805' => 'lja', 'Lj4g0006097' => 'lja', 'Lj4g0008528' => 'lja', 'Lj4g0024907' => 'lja', 'Lj5g0012472' => 'lja', 'Lj5g0018648' => 'lja', 'Lj6C789G1' => 'lonja', 'Lj6g0004000' => 'lja', 'Lj7A292G67' => 'lonja', 'Lj7A292T64' => 'lonja', 'Lj9A400T58' => 'lonja', 'Lsat_1_v5_gn_1_126181' => 'lsa', 'Lsat_1_v5_gn_4_123041' => 'lsa', 'Lsat_1_v5_gn_4_133620' => 'lsa', 'Lsat_1_v5_gn_4_53221' => 'lsa', 'Lsat_1_v5_gn_4_71961' => 'lsa', 'Lsat_1_v5_gn_7_105241' => 'lsa', 'Lsat_1_v5_gn_7_21361' => 'lsa', 'Lsat_1_v5_gn_7_28860' => 'lsa', 'Lsat_1_v5_gn_7_31260' => 'lsa', 'Lsat_1_v5_gn_8_52801' => 'lsa', 'Manes.02G191400' => 'mes', 'Manes.03G110100' => 'mes', 'Manes.04G071100' => 'mes', 'Manes.05G100500' => 'mes', 'Manes.05G164700' => 'mes', 'Manes.15G087000' => 'mes', 'Manes.15G121500' => 'mes', 'Manes.16G028300' => 'mes', 'Manes.17G046100' => 'mes', 'Manes.17G069800' => 'mes', 'Manes.18G100500' => 'mes', 'Mapoly0002s0109' => 'mpo', 'Mapoly0024s0007' => 'mpo', 'Mapoly0089s0032' => 'mpo', 'MBI04_g42241_MAGBIO' => 'mbi', 'MBI05_g11988_MAGBIO' => 'mbi', 'MBI05_g35452_MAGBIO' => 'mbi', 'MBI07_g30179_MAGBIO' => 'mbi', 'MBI07_g35859_MAGBIO' => 'mbi', 'MBI07_g35860_MAGBIO' => 'mbi', 'MBI07_g37166_MAGBIO' => 'mbi', 'MBI08_g18172_MAGBIO' => 'mbi', 'MBI09_g08441_MAGBIO' => 'mbi', 'MBI13_g01676_MAGBIO' => 'mbi', 'MBI14_g42955_MAGBIO' => 'mbi', 'MBI16_g13161_MAGBIO' => 'mbi', 'MBI17_g27204_MAGBIO' => 'mbi', 'MBI19_g21595_MAGBIO' => 'mbi', 'MD00G1148400' => 'mdo', 'MD02G1301200' => 'mdo', 'MD03G1227800' => 'mdo', 'MD05G1041100' => 'mdo', 'MD05G1124800' => 'mdo', 'MD05G1284000' => 'mdo', 'MD05G1338800' => 'mdo', 'MD05G1338900' => 'mdo', 'MD07G1022800' => 'mdo', 'MD10G1047500' => 'mdo', 'MD10G1127500' => 'mdo', 'MD10G1262300' => 'mdo', 'MD10G1293800' => 'mdo', 'MD16G1074300' => 'mdo', 'Medtr1g021670' => 'mtr', 'Medtr1g096320' => 'mtr', 'Medtr2g013690' => 'mtr', 'Medtr2g019450' => 'mtr', 'Medtr2g085170' => 'mtr', 'Medtr4g088785' => 'mtr', 'Medtr8g055930' => 'mtr', 'Medtr8g085850' => 'mtr', 'MELO3C002605.2' => 'cme', 'MELO3C003891.2' => 'cme', 'MELO3C004012.2' => 'cme', 'MELO3C007134.2' => 'cme', 'MELO3C008118.2' => 'cme', 'MELO3C016700.2' => 'cme', 'MELO3C024127.2' => 'cme', 'MELO3C033361.2' => 'cme', 'MELO3C033362.2' => 'cme', 'Migut.C00430' => 'egut', 'Migut.C01246' => 'egut', 'Migut.E00101' => 'egut', 'Migut.H01486' => 'egut', 'Migut.H01939' => 'egut', 'Migut.K00360' => 'egut', 'Migut.M00910' => 'egut', 'Migut.M01139' => 'egut', 'Migut.N02677' => 'egut', 'MSTRG.13252' => 'ama', 'MSTRG.14701' => 'ama', 'MSTRG.1521' => 'ama', 'MSTRG.15884' => 'ama', 'MSTRG.16242' => 'ama', 'MSTRG.22285' => 'ama', 'MSTRG.22444' => 'ama', 'MSTRG.2349' => 'ama', 'MSTRG.26308' => 'ama', 'MSTRG.28296' => 'ama', 'MSTRG.9895' => 'ama', 'Nitab4.5_0000110g0060' => 'nta', 'Nitab4.5_0000420g0130' => 'nta', 'Nitab4.5_0000422g0030' => 'nta', 'Nitab4.5_0000560g0180' => 'nta', 'Nitab4.5_0000703g0100' => 'nta', 'Nitab4.5_0000786g0200' => 'nta', 'Nitab4.5_0001336g0020' => 'nta', 'Nitab4.5_0001796g0030' => 'nta', 'Nitab4.5_0003348g0060' => 'nta', 'Nitab4.5_0003698g0040' => 'nta', 'Nitab4.5_0003942g0090' => 'nta', 'Nitab4.5_0004775g0070' => 'nta', 'Nitab4.5_0004864g0030' => 'nta', 'Nitab4.5_0005615g0020' => 'nta', 'Nitab4.5_0009288g0030' => 'nta', 'Nitab4.5_0009341g0010' => 'nta', 'Nitab4.5_0009535g0010' => 'nta', 'Nn1g03995' => 'nnu', 'Nn1g04100' => 'nnu', 'Nn1g06530' => 'nnu', 'Nn3g16404' => 'nnu', 'Nn3g17212' => 'nnu', 'Nn3g20776' => 'nnu', 'Nn3g21923' => 'nnu', 'Nn5g27737' => 'nnu', 'Nn5g29461' => 'nnu', 'Nn7g38355' => 'nnu', 'Nn8g39873' => 'nnu', 'Oeu000548.2' => 'oeu', 'Oeu004672.1' => 'oeu', 'Oeu015605.2' => 'oeu', 'Oeu016092.1' => 'oeu', 'Oeu017879.3' => 'oeu', 'Oeu024910.1' => 'oeu', 'Oeu028965.1' => 'oeu', 'Oeu031269.1' => 'oeu', 'Oeu031270.1' => 'oeu', 'Oeu032535.1' => 'oeu', 'Oeu034151.1' => 'oeu', 'Oeu034152.1' => 'oeu', 'Oeu034588.2' => 'oeu', 'Oeu050846.1' => 'oeu', 'Oeu050849.2' => 'oeu', 'Oeu051063.2' => 'oeu', 'Oeu052368.1' => 'oeu', 'Oeu052370.1' => 'oeu', 'Os01g0210400' => 'osa', 'Os01g0304300' => 'osa', 'Os01g0749100' => 'osa', 'Os02g0745800' => 'osa', 'Os03g0769050' => 'osa', 'Os05g0531500' => 'osa', 'Os06g0724300' => 'osa', 'Os11g0198100' => 'osa', 'Peaxi162Scf00069g01425' => 'pax', 'Peaxi162Scf00280g00811' => 'pax', 'Peaxi162Scf00310g00615' => 'pax', 'Peaxi162Scf00362g00542' => 'pax', 'Peaxi162Scf00461g00310' => 'pax', 'Peaxi162Scf00530g00118' => 'pax', 'Peaxi162Scf00541g00057' => 'pax', 'Peaxi162Scf00661g00017' => 'pax', 'Peaxi162Scf00926g00027' => 'pax', 'Peaxi162Scf01064g00263' => 'pax', 'Peaxi162Scf01211g00135' => 'pax', 'PGR004G2336' => 'pgr', 'PGR042G0327' => 'pgr', 'PGR042G1957' => 'pgr', 'PGR042G2003' => 'pgr', 'PGR042G3929' => 'pgr', 'PGR083G1137' => 'pgr', 'PGR083G1364' => 'pgr', 'PGSC0003DMG400003381' => 'stu', 'PGSC0003DMG400003417' => 'stu', 'PGSC0003DMG400008981' => 'stu', 'PGSC0003DMG400012417' => 'stu', 'PGSC0003DMG400012823' => 'stu', 'PGSC0003DMG400016885' => 'stu', 'PGSC0003DMG400022812' => 'stu', 'PGSC0003DMG400029726' => 'stu', 'PGSC0003DMG401009243' => 'stu', 'PGSC0003DMG401031505' => 'stu', 'PGSC0003DMG402031505' => 'stu', 'Phvul.001G017600' => 'pvu', 'Phvul.002G193500' => 'pvu', 'Phvul.002G228900' => 'pvu', 'Phvul.002G236800' => 'pvu', 'Phvul.003G049500' => 'pvu', 'Phvul.005G072000' => 'pvu', 'Phvul.006G164800' => 'pvu', 'Phvul.006G185100' => 'pvu', 'Phvul.007G090000' => 'pvu', 'Potri.001G399800' => 'ptr', 'Potri.002G149900' => 'ptr', 'Potri.004G044100' => 'ptr', 'Potri.004G177600' => 'ptr', 'Potri.009G138000' => 'ptr', 'Potri.010G094000' => 'ptr', 'Potri.011G053000' => 'ptr', 'Potri.011G119300' => 'ptr', 'Potri.013G113700' => 'ptr', 'Potri.018G107800' => 'ptr', 'Potri.019G084100' => 'ptr', 'Pp3c14_23720' => 'ppa', 'Pp3c16_6340' => 'ppa', 'Pp3c23_13420' => 'ppa', 'Pp3c24_2740' => 'ppa', 'Pp3c25_860' => 'ppa', 'Pp3c8_21750' => 'ppa', 'Prupe.1G273000' => 'ppe', 'Prupe.1G273700' => 'ppe', 'Prupe.1G274100' => 'ppe', 'Prupe.2G023300' => 'ppe', 'Prupe.4G048000' => 'ppe', 'Prupe.4G080400' => 'ppe', 'Prupe.4G181200' => 'ppe', 'Prupe.8G056900' => 'ppe', 'Prupe.8G168700' => 'ppe', 'Psat1g189080' => 'psa', 'Psat1g204760' => 'psa', 'Psat4g175560' => 'psa', 'Psat4g177720' => 'psa', 'Psat5g244240' => 'psa', 'Psat6g010720' => 'psa', 'Psat6g187200' => 'psa', 'Psat7g072040' => 'psa', 'PSO017G3501' => 'pso', 'PSO063G2148' => 'pso', 'PSO063G5608' => 'pso', 'PSO210G6392' => 'pso', 'PSO541G2319' => 'pso', 'PSO541G2836' => 'pso', 'PSO541G4012' => 'pso', 'PSO541G6253' => 'pso', 'PSO675G0580' => 'pso', 'PSO675G0856' => 'pso', 'PSO675G5635' => 'pso', 'PSO675G9157' => 'pso', 'PSO832G1660' => 'pso', 'PSO832G1969' => 'pso', 'QL02p007186' => 'qlo', 'QL02p033904' => 'qlo', 'QL03p064391' => 'qlo', 'QL05p040593' => 'qlo', 'QL05p058242' => 'qlo', 'QL08p021825' => 'qlo', 'QL11p004981' => 'qlo', 'RcHm_v2.0_Chr1g0318301' => 'rch', 'RcHm_v2.0_Chr4g0418501' => 'rch', 'RcHm_v2.0_Chr4g0439971' => 'rch', 'RcHm_v2.0_Chr5g0008541' => 'rch', 'RcHm_v2.0_Chr5g0014101' => 'rch', 'RcHm_v2.0_Chr5g0014131' => 'rch', 'RcHm_v2.0_Chr5g0033621' => 'rch', 'RcHm_v2.0_Chr6g0272041' => 'rch', 'RcHm_v2.0_Chr6g0278831' => 'rch', 'Rhsim02G0130400' => 'rsi', 'Rhsim02G0171100' => 'rsi', 'Rhsim05G0053000' => 'rsi', 'Rhsim05G0053100' => 'rsi', 'Rhsim06G0096500' => 'rsi', 'Rhsim06G0096600' => 'rsi', 'Rhsim06G0199100' => 'rsi', 'Rhsim12G0062300' => 'rsi', 'Rhsim12G0062800' => 'rsi', 'Sabra02G0118600' => 'sbr', 'Sabra04G0027300' => 'sbr', 'Sabra04G0119500' => 'sbr', 'Sabra08G0112500' => 'sbr', 'Sabra11G0036800' => 'sbr', 'Sabra11G0103800' => 'sbr', 'Sabra13G0096300' => 'sbr', 'Sabra16G0262300' => 'sbr', 'Sabra18G0091700' => 'sbr', 'Sabra19G0095400' => 'sbr', 'SalBow6G3080' => 'sbo', 'SalBow7G1157' => 'sbo', 'SalBow7G2123' => 'sbo', 'SalBow7G2285' => 'sbo', 'SalBow7G3537' => 'sbo', 'SalBow8G2947' => 'sbo', 'SalBow8G4463' => 'sbo', 'SalBow8G5466' => 'sbo', 'Sc01g0001750' => 'sci', 'Sc02g0006640' => 'sci', 'Sc02g0006670' => 'sci', 'Sc04g0008220' => 'sci', 'Sc05g0006190' => 'sci', 'Sc08g0002760' => 'sci', 'Sc17g0006170' => 'sci', 'Sc22g0002050' => 'sci', 'Sc23g0001190' => 'sci', 'Sc24g0000980' => 'sci', 'Sed0006245' => 'sed', 'Sed0007543' => 'sed', 'Sed0009411' => 'sed', 'Sed0010765' => 'sed', 'Sed0012944' => 'sed', 'Sed0014682' => 'sed', 'Sed0016174' => 'sed', 'Sed0016796' => 'sed', 'Sed0020317' => 'sed', 'Sed0021467' => 'sed', 'SEGI_01316' => 'sgi', 'SEGI_03374' => 'sgi', 'SEGI_16265' => 'sgi', 'SEGI_18569' => 'sgi', 'SEGI_20351' => 'sgi', 'SEGI_26395' => 'sgi', 'SEGI_29469' => 'sgi', 'SEGI_34771' => 'sgi', 'SEGI_36769' => 'sgi', 'SEGI_37139' => 'sgi', 'SGA_v2.0_scaffold100G29687' => 'sas', 'SGA_v2.0_scaffold118G32472' => 'sas', 'SGA_v2.0_scaffold14G07051' => 'sas', 'SGA_v2.0_scaffold183G39845' => 'sas', 'SGA_v2.0_scaffold1G00174' => 'sas', 'SGA_v2.0_scaffold22G09714' => 'sas', 'SGA_v2.0_scaffold333G48992' => 'sas', 'SGA_v2.0_scaffold46G17491' => 'sas', 'SGA_v2.0_scaffold49G18294' => 'sas', 'SGA_v2.0_scaffold63G21658' => 'sas', 'SHI01741' => 'shi', 'SHI05771' => 'shi', 'SHI18077' => 'shi', 'SHI20525' => 'shi', 'SHI20527' => 'shi', 'SHI20528' => 'shi', 'SMO172G0185' => 'smo', 'SMO198G0020' => 'smo', 'SMO351G0006' => 'smo', 'SMO356G0118' => 'smo', 'SMO358G0296' => 'smo', 'SMO367G0079' => 'smo', 'SMO367G1277' => 'smo', 'Solyc01g014220.3' => 'sly', 'Solyc01g111770.2' => 'sly', 'Solyc02g078180.3' => 'sly', 'Solyc03g006430.3' => 'sly', 'Solyc03g006456.1' => 'sly', 'Solyc03g079860.2' => 'sly', 'Solyc04g079770.3' => 'sly', 'Solyc05g007430.4' => 'sly', 'Solyc07g063150.3' => 'sly', 'Solyc08g016620.3' => 'sly', 'Solyc09g057590.3' => 'sly', 'Solyc09g057600.1' => 'sly', 'Solyc10g009050.3' => 'sly', 'Solyc11g017420.2' => 'sly', 'Sopen01g053810' => 'spe', 'Sopen02g023040' => 'spe', 'Sopen03g002440' => 'spe', 'Sopen04g033350' => 'spe', 'Sopen05g003310' => 'spe', 'Sopen07g004050' => 'spe', 'Sopen07g031340' => 'spe', 'Sopen08g006990' => 'spe', 'Sopen10g004830' => 'spe', 'Sopen11g009370' => 'spe', 'Sp1g24450' => 'spa', 'Sp1g29670' => 'spa', 'Sp1g39600' => 'spa', 'Sp2g11080' => 'spa', 'Sp2g13970' => 'spa', 'Sp4g16130' => 'spa', 'Sp6g13080' => 'spa', 'Sp7g37270' => 'spa', 'TAR371G0065' => 'tar', 'TAR376G0340' => 'tar', 'TAR376G0435' => 'tar', 'TAR381G0002' => 'tar', 'TAR381G1236' => 'tar', 'TAR624G0055' => 'tar', 'TAR624G0324' => 'tar', 'TAR624G0696' => 'tar', 'TAR624G0906' => 'tar', 'TAR625G0107' => 'tar', 'TAR626G0015' => 'tar', 'TAR626G1356' => 'tar', 'TAR627G0888' => 'tar', 'TAR628G0399' => 'tar', 'TAR628G1327' => 'tar', 'TAR629G2831' => 'tar', 'TAR629G2874' => 'tar', 'TAR633G1432' => 'tar', 'TAR633G2771' => 'tar', 'THA.LOC104803394' => 'tha', 'THA.LOC104805153' => 'tha', 'THA.LOC104806784' => 'tha', 'THA.LOC104810473' => 'tha', 'THA.LOC104813100' => 'tha', 'THA.LOC104814215' => 'tha', 'THA.LOC104815554' => 'tha', 'THA.LOC104820544' => 'tha', 'THA.LOC104824754' => 'tha', 'THA.LOC104827717' => 'tha', 'Thecc.02G031400' => 'tca', 'Thecc.02G055900' => 'tca', 'Thecc.02G350800' => 'tca', 'Thecc.06G150900' => 'tca', 'Thecc.06G186600' => 'tca', 'Thecc.07G089600' => 'tca', 'Thecc.08G020400' => 'tca', 'Thecc.08G182100' => 'tca', 'Thhalv10000873m.g' => 'esa', 'Thhalv10004185m.g' => 'esa', 'Thhalv10006981m.g' => 'esa', 'Thhalv10007204m.g' => 'esa', 'Thhalv10011374m.g' => 'esa', 'Thhalv10013482m.g' => 'esa', 'Thhalv10017801m.g' => 'esa', 'Thhalv10024983m.g' => 'esa', 'TPR.G12072' => 'tpr', 'TPR.G15769' => 'tpr', 'TPR.G16504' => 'tpr', 'TPR.G16506' => 'tpr', 'TPR.G24345' => 'tpr', 'TPR.G26666' => 'tpr', 'TPR.G27320' => 'tpr', 'TPR.G31819' => 'tpr', 'TPR.G38879' => 'tpr', 'TPR.G39015' => 'tpr', 'TPR.G8819' => 'tpr', 'TWI09G0924' => 'twi', 'TWI12G0811' => 'twi', 'TWI12G1294' => 'twi', 'TWI31G0150' => 'twi', 'TWI36G1262' => 'twi', 'TWI38G1287' => 'twi', 'TWI38G1633' => 'twi', 'TWI38G1982' => 'twi', 'TWI39G0116' => 'twi', 'TWI60G1011' => 'twi', 'TWI63G0171' => 'twi', 'TWI73G0839' => 'twi', 'TWI79G1511' => 'twi', 'unitig_0.g915' => 'ugi', 'unitig_0.g916' => 'ugi', 'unitig_21.g20219' => 'ugi', 'unitig_21.g20416' => 'ugi', 'unitig_578.g16132' => 'ugi', 'unitig_578.g16718' => 'ugi', 'unitig_62.g23481' => 'ugi', 'unitig_744.g24535' => 'ugi', 'unitig_749.g13525' => 'ugi', 'vmacro01248' => 'vma', 'vmacro02290' => 'vma', 'vmacro10946' => 'vma', 'vmacro11865' => 'vma', 'vmacro12493' => 'vma', 'vmacro17322' => 'vma', 'vmacro21599' => 'vma', 'vmacro23041' => 'vma', 'VMungo0251G0004' => 'vmu', 'VMungo0251G2639' => 'vmu', 'VMungo0251G2967' => 'vmu', 'VMungo0540G0864' => 'vmu', 'VMungo0540G1569' => 'vmu', 'VMungo0647G0317' => 'vmu', 'VMungo0720G1373' => 'vmu', 'VMungo0720G1508' => 'vmu', 'VMungo1080G0485' => 'vmu', 'VMungo1215G3177' => 'vmu', 'Zm00001eb112600' => 'zma', 'Zm00001eb120220' => 'zma', 'Zm00001eb153240' => 'zma', 'Zm00001eb168880' => 'zma', 'Zm00001eb213920' => 'zma', 'Zm00001eb228280' => 'zma', 'Zm00001eb254580' => 'zma', 'Zm00001eb272180' => 'zma', 'Zm00001eb293190' => 'zma', 'Zm00001eb322930' => 'zma', 'Zm00001eb353360' => 'zma', 'Zm00001eb353390' => 'zma', 'Zm00001eb353430' => 'zma', 'Zm00001eb353440' => 'zma', 'Zm00001eb353780' => 'zma' ), 'gf_id' => 'HOM05D000499', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000499' ), 'data_identifier' => 'HOM05D000499', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000499', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1066', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p29780' => 'bna', 'A02p33180' => 'bna', 'A03p16470' => 'bna', 'A03p66010' => 'bna', 'A04p25970' => 'bna', 'A06p01270' => 'bna', 'A06p46080' => 'bna', 'A07p11400' => 'bna', 'A08p01840' => 'bna', 'A08p08230' => 'bna', 'A08p25740' => 'bna', 'A09p32070' => 'bna', 'A09p37830' => 'bna', 'A09p42840' => 'bna', 'A09p42850' => 'bna', 'Aa31LG10G2060' => 'aar', 'Aa31LG2G7410' => 'aar', 'Aa31LG6G10200' => 'aar', 'Aa31LG6G16680' => 'aar', 'Aa31LG6G8470' => 'aar', 'Aa31LG9G12730' => 'aar', 'Aa31LG9G13680' => 'aar', 'Aa31LG9G14920' => 'aar', 'Aa31LG9G6650' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4977' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5467' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3254' => 'aag', 'Actinidia02578' => 'ach', 'Actinidia07693' => 'ach', 'Actinidia08413' => 'ach', 'Actinidia08414' => 'ach', 'Actinidia15289' => 'ach', 'Actinidia19871' => 'ach', 'Actinidia21475' => 'ach', 'Actinidia22576' => 'ach', 'Actinidia28327' => 'ach', 'Actinidia32491' => 'ach', 'Actinidia39463' => 'ach', 'Actinidia39571' => 'ach', 'Ah.01g013750' => 'amhyb', 'Ah.01g023210' => 'amhyb', 'Ah.04g164850' => 'amhyb', 'Ah.05g178060' => 'amhyb', 'Ah.07g204270' => 'amhyb', 'Ah.07g208480' => 'amhyb', 'Ah.09g237410' => 'amhyb', 'Ah.14g089460' => 'amhyb', 'AL1G41790' => 'aly', 'AL1G49050' => 'aly', 'AL1G53810' => 'aly', 'AL1G61400' => 'aly', 'AL4G18580' => 'aly', 'AL5G12510' => 'aly', 'AL5G12540' => 'aly', 'AL6G43230' => 'aly', 'AL7G10370' => 'aly', 'AL7G19250' => 'aly', 'AL8G12240' => 'aly', 'AL8G18540' => 'aly', 'Aqoxy1G02409' => 'aox', 'Aqoxy2G03993' => 'aox', 'Aqoxy3G03357' => 'aox', 'Aqoxy4G00785' => 'aox', 'Aqoxy5G02598' => 'aox', 'Aqoxy6G00132' => 'aox', 'Aqoxy7G01776' => 'aox', 'Aqoxy7G02316' => 'aox', 'Aqoxy7G03973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.12AFKW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B8730' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27IQR1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3F75VG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3RE0GA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41TCQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.527VTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FIR39' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5W8UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DA38EV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ63HS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H1I32C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HC27T5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4M8AP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7N3CZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9UVDZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LS1NQA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT1D4B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SKC4TM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCFV76' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF9Q1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQWD9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1ZM88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WE07RT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YCK7VH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJE6Q6' => 'arhy', 'AT1G28240' => 'ath', 'AT1G34550' => 'ath', 'AT1G53040' => 'ath', 'AT2G02910' => 'ath', 'AT4G09630' => 'ath', 'AT4G38500' => 'ath', 'AT5G42660' => 'ath', 'AT5G46220' => 'ath', 'ATR0152G026' => 'atr', 'ATR0564G343' => 'atr', 'ATR0706G151' => 'atr', 'ATR0733G207' => 'atr', 'ATR0751G234' => 'atr', 'ATR0807G048' => 'atr', 'ATR1091G084' => 'atr', 'Atru.chr10.1229' => 'acertr', 'Atru.chr10.1230' => 'acertr', 'Atru.chr10.1874' => 'acertr', 'Atru.chr11.1808' => 'acertr', 'Atru.chr13.1795' => 'acertr', 'Atru.chr13.570' => 'acertr', 'Atru.chr2.2608' => 'acertr', 'Atru.chr2.2609' => 'acertr', 'Atru.chr5.3428' => 'acertr', 'Atru.chr8.1171' => 'acertr', 'AUR62004651' => 'cqu', 'AUR62008675' => 'cqu', 'AUR62010014' => 'cqu', 'AUR62013004' => 'cqu', 'AUR62014825' => 'cqu', 'AUR62015015' => 'cqu', 'AUR62015151' => 'cqu', 'AUR62017020' => 'cqu', 'AUR62019422' => 'cqu', 'AUR62023570' => 'cqu', 'AUR62025571' => 'cqu', 'AUR62029098' => 'cqu', 'AUR62033863' => 'cqu', 'AUR62034296' => 'cqu', 'AUR62040075' => 'cqu', 'BcaB02g07334' => 'bca', 'BcaB02g10575' => 'bca', 'BcaB03g12119' => 'bca', 'BcaB03g12120' => 'bca', 'BcaB03g13945' => 'bca', 'BcaB04g17123' => 'bca', 'BcaB04g17867' => 'bca', 'BcaB04g19839' => 'bca', 'BcaB07g30317' => 'bca', 'BcaB07g32432' => 'bca', 'BcaB07g33362' => 'bca', 'BcaB08g36611' => 'bca', 'BcaC01g00028' => 'bca', 'BcaC01g01356' => 'bca', 'BcaC01g02034' => 'bca', 'BcaC01g06051' => 'bca', 'BcaC03g16839' => 'bca', 'BcaC03g17176' => 'bca', 'BcaC05g26829' => 'bca', 'BcaC06g31490' => 'bca', 'BcaC06g35344' => 'bca', 'BcaC06g36570' => 'bca', 'BcaC07g37537' => 'bca', 'BcaC08g43491' => 'bca', 'BcaC08g43773' => 'bca', 'BcaNung00234' => 'bca', 'BcaNung01982' => 'bca', 'BcaNung03707' => 'bca', 'BcaNung06454' => 'bca', 'BolC2t10762H' => 'bol', 'BolC2t11191H' => 'bol', 'BolC3t14322H' => 'bol', 'BolC3t19747H' => 'bol', 'BolC3t21425H' => 'bol', 'BolC4t27800H' => 'bol', 'BolC5t31423H' => 'bol', 'BolC6t35951H' => 'bol', 'BolC6t36282H' => 'bol', 'BolC7t40678H' => 'bol', 'BolC7t40679H' => 'bol', 'BolC7t42222H' => 'bol', 'BolC7t43492H' => 'bol', 'BolC7t46785H' => 'bol', 'BolC8t47853H' => 'bol', 'BolC9t56805H' => 'bol', 'BraA02t08000Z' => 'bra', 'BraA02t08341Z' => 'bra', 'BraA03t10936Z' => 'bra', 'BraA03t15657Z' => 'bra', 'BraA04t18100Z' => 'bra', 'BraA05t20523Z' => 'bra', 'BraA06t23353Z' => 'bra', 'BraA06t27473Z' => 'bra', 'BraA06t27769Z' => 'bra', 'BraA07t28928Z' => 'bra', 'BraA08t32236Z' => 'bra', 'BraA08t32841Z' => 'bra', 'BraA08t34524Z' => 'bra', 'BraA09t38742Z' => 'bra', 'BraA09t39295Z' => 'bra', 'C02p47180' => 'bna', 'C02p50990' => 'bna', 'C03p19360' => 'bna', 'C03p74950' => 'bna', 'C03p91000' => 'bna', 'C04p63260' => 'bna', 'C05p27050' => 'bna', 'C06p08750' => 'bna', 'C06p11490' => 'bna', 'C07p02820' => 'bna', 'C07p17180' => 'bna', 'C07p29440' => 'bna', 'C07p63730' => 'bna', 'C09p39260' => 'bna', 'CAN.G1164.34' => 'can', 'CAN.G1164.39' => 'can', 'CAN.G1530.3' => 'can', 'CAN.G162.61' => 'can', 'CAN.G176.6' => 'can', 'CAN.G289.49' => 'can', 'CAN.G370.21' => 'can', 'CAN.G370.22' => 'can', 'CAN.G371.117' => 'can', 'CAN.G58.37' => 'can', 'CAN.G588.98' => 'can', 'CANSAT21G2266' => 'cansat', 'CANSAT25G2799' => 'cansat', 'CANSAT35G0862' => 'cansat', 'CANSAT35G1704' => 'cansat', 'CANSAT35G1760' => 'cansat', 'CANSAT56G3971' => 'cansat', 'CANSAT56G4116' => 'cansat', 'CANSAT80G1259' => 'cansat', 'CARHR027730' => 'chi', 'CARHR033880' => 'chi', 'CARHR043270' => 'chi', 'CARHR145330' => 'chi', 'CARHR145340' => 'chi', 'CARHR175570' => 'chi', 'CARHR181570' => 'chi', 'CARHR258470' => 'chi', 'CARHR260490' => 'chi', 'CARHR294220' => 'chi', 'Carub.0001s2668' => 'cru', 'Carub.0001s3257' => 'cru', 'Carub.0001s4220' => 'cru', 'Carub.0005s0179' => 'cru', 'Carub.0006s2807' => 'cru', 'Carub.0007s0039' => 'cru', 'Carub.0008s0169' => 'cru', 'Carub.0008s0636' => 'cru', 'Ca_00338_v3' => 'car', 'Ca_00542_v3' => 'car', 'Ca_01844_v3' => 'car', 'Ca_10611_v3' => 'car', 'Ca_13326_v3' => 'car', 'Ca_17944_v3' => 'car', 'Ca_18546_v3' => 'car', 'Ca_24219_v3' => 'car', 'Ca_29972_v3' => 'car', 'CBR_g3681' => 'cbr', 'CBR_g40021' => 'cbr', 'Cc01_g08140' => 'ccan', 'Cc02_g13410' => 'ccan', 'Cc02_g37480' => 'ccan', 'Cc05_g12030' => 'ccan', 'Cc09_g03370' => 'ccan', 'Cc09_g10300' => 'ccan', 'Cc10_g03530' => 'ccan', 'Cc10_g11380' => 'ccan', 'CDE01G0176' => 'cde', 'CDE02G0675' => 'cde', 'CDE02G0942' => 'cde', 'CDE02G1153' => 'cde', 'CDE02G4177' => 'cde', 'CDE04G2117' => 'cde', 'CDE04G2736' => 'cde', 'CDE08G1161' => 'cde', 'CDE09G1238' => 'cde', 'Cfa000467' => 'cfa', 'Cfa000947' => 'cfa', 'Cfa004969' => 'cfa', 'Cfa005284' => 'cfa', 'Cfa008993' => 'cfa', 'Cfa018187' => 'cfa', 'Cfa018454' => 'cfa', 'Cfa020585' => 'cfa', 'Ciclev10000424m.g' => 'ccl', 'Ciclev10003605m.g' => 'ccl', 'Ciclev10007828m.g' => 'ccl', 'Ciclev10014620m.g' => 'ccl', 'Ciclev10015169m.g' => 'ccl', 'Ciclev10018291m.g' => 'ccl', 'Ciclev10028256m.g' => 'ccl', 'Ciclev10033822m.g' => 'ccl', 'CiPaw.05G060300' => 'cil', 'CiPaw.05G085000' => 'cil', 'CiPaw.06G083700' => 'cil', 'CiPaw.06G120300' => 'cil', 'CiPaw.09G060500' => 'cil', 'CiPaw.09G123800' => 'cil', 'CiPaw.11G169700' => 'cil', 'CiPaw.12G118300' => 'cil', 'CiPaw.15G071000' => 'cil', 'CiPaw.15G081900' => 'cil', 'ClCG01G024610' => 'cla', 'ClCG03G006070' => 'cla', 'ClCG05G019250' => 'cla', 'ClCG09G009500' => 'cla', 'ClCG11G008200' => 'cla', 'ClCG11G018080' => 'cla', 'COL.COLO4_17373' => 'col', 'COL.COLO4_22994' => 'col', 'COL.COLO4_26389' => 'col', 'COL.COLO4_27170' => 'col', 'COL.COLO4_31074' => 'col', 'COL.COLO4_31465' => 'col', 'COL.COLO4_36438' => 'col', 'COL.COLO4_36439' => 'col', 'Cpa.g.c38781' => 'cpa', 'Cpa.g.sc128.12' => 'cpa', 'Cpa.g.sc166.7' => 'cpa', 'Cpa.g.sc166.8' => 'cpa', 'Cpa.g.sc20.111' => 'cpa', 'Cpa.g.sc27.31' => 'cpa', 'Cpa.g.sc64.36' => 'cpa', 'Cpa.g.sc64.37' => 'cpa', 'Cpa.g.sc66.49' => 'cpa', 'Cpa.g.sc80.64' => 'cpa', 'CsaV3_1G012320' => 'csa', 'CsaV3_2G008480' => 'csa', 'CsaV3_2G033450' => 'csa', 'CsaV3_3G044830' => 'csa', 'CsaV3_4G033710' => 'csa', 'CsaV3_6G051730' => 'csa', 'CsaV3_7G025350' => 'csa', 'CSS0001067' => 'camsi', 'CSS0005996' => 'camsi', 'CSS0006590' => 'camsi', 'CSS0009673' => 'camsi', 'CSS0010201' => 'camsi', 'CSS0010549' => 'camsi', 'CSS0011364' => 'camsi', 'CSS0014473' => 'camsi', 'CSS0014961' => 'camsi', 'CSS0020191' => 'camsi', 'CSS0021165' => 'camsi', 'CSS0022306' => 'camsi', 'CSS0030591' => 'camsi', 'CSS0030696' => 'camsi', 'CSS0032653' => 'camsi', 'CSS0037487' => 'camsi', 'CSS0041102' => 'camsi', 'CSS0041261' => 'camsi', 'CSS0046246' => 'camsi', 'CSS0049256' => 'camsi', 'DCAR_004075' => 'dca', 'DCAR_011538' => 'dca', 'DCAR_019553' => 'dca', 'DCAR_020952' => 'dca', 'DCAR_021739' => 'dca', 'DCAR_027407' => 'dca', 'DCAR_027913' => 'dca', 'DCAR_028066' => 'dca', 'Dinv05899' => 'din', 'Dinv07563' => 'din', 'Dinv08010' => 'din', 'Dinv14125' => 'din', 'Dinv20172' => 'din', 'Dinv30743' => 'din', 'Dinv31229' => 'din', 'Dinv34162' => 'din', 'Dinv36028' => 'din', 'Dinv39368' => 'din', 'Dinv40565' => 'din', 'Dinv41706' => 'din', 'Duzib052G0089' => 'dzi', 'Duzib116G0641' => 'dzi', 'Duzib132G0069' => 'dzi', 'Duzib132G1219' => 'dzi', 'Duzib147G0278' => 'dzi', 'Duzib160G0480' => 'dzi', 'Duzib170G0661' => 'dzi', 'Duzib177G0591' => 'dzi', 'Duzib187G1353' => 'dzi', 'Duzib192G0858' => 'dzi', 'Duzib192G0883' => 'dzi', 'Duzib213G0506' => 'dzi', 'Duzib235G0289' => 'dzi', 'Duzib251G0422' => 'dzi', 'ECA232G3898' => 'eca', 'ECA233G5950' => 'eca', 'ECA234G1699' => 'eca', 'ECA234G2421' => 'eca', 'ECA236G0426' => 'eca', 'ECA236G4331' => 'eca', 'ECA248G2573' => 'eca', 'EL10Ac1g00077' => 'bvu', 'EL10Ac1g01746' => 'bvu', 'EL10Ac2g03464' => 'bvu', 'EL10Ac4g08176' => 'bvu', 'EL10Ac7g17521' => 'bvu', 'EL10Ac8g20386' => 'bvu', 'EL10Ac9g21343' => 'bvu', 'EL10Ac9g22688' => 'bvu', 'Eucgr.B03434' => 'egr', 'Eucgr.D00618' => 'egr', 'Eucgr.E02395' => 'egr', 'Eucgr.F01129' => 'egr', 'Eucgr.F02622' => 'egr', 'Eucgr.F04207' => 'egr', 'FAN01G0570' => 'fan', 'FAN03G3351' => 'fan', 'FAN06G3702' => 'fan', 'FAN07G2149' => 'fan', 'FAN10G3758' => 'fan', 'FAN11G1170' => 'fan', 'FAN11G2050' => 'fan', 'FAN11G2724' => 'fan', 'FAN12G1700' => 'fan', 'FAN12G2028' => 'fan', 'FAN15G1160' => 'fan', 'FAN15G3063' => 'fan', 'FAN16G2540' => 'fan', 'FAN16G3077' => 'fan', 'FAN16G3624' => 'fan', 'FAN17G0221' => 'fan', 'FAN20G2492' => 'fan', 'FAN20G2905' => 'fan', 'FAN21G0548' => 'fan', 'FAN21G1300' => 'fan', 'FAN22G0077' => 'fan', 'FAN22G1315' => 'fan', 'FAN24G1280' => 'fan', 'FAN24G1445' => 'fan', 'FAN24G3527' => 'fan', 'FAN25G0464' => 'fan', 'FAN25G2885' => 'fan', 'FAN25G3270' => 'fan', 'FAN27G1101' => 'fan', 'FAN27G2846' => 'fan', 'FAN27G3524' => 'fan', 'FvH4_2g11770' => 'fve', 'FvH4_2g15630' => 'fve', 'FvH4_3g05570' => 'fve', 'FvH4_3g09110' => 'fve', 'FvH4_3g19940' => 'fve', 'FvH4_4g04821' => 'fve', 'FvH4_4g31480' => 'fve', 'FvH4_7g01740' => 'fve', 'Glyma.05G130400' => 'gma', 'Glyma.05G156400' => 'gma', 'Glyma.07G197000' => 'gma', 'Glyma.08G085151' => 'gma', 'Glyma.08G114500' => 'gma', 'Glyma.08G300400' => 'gma', 'Glyma.10G215800' => 'gma', 'Glyma.12G224400' => 'gma', 'Glyma.13G179300' => 'gma', 'Glyma.13G218151' => 'gma', 'Glyma.13G238800' => 'gma', 'Glyma.13G276900' => 'gma', 'Glyma.14G078200' => 'gma', 'Glyma.15G074500' => 'gma', 'Glyma.15G094100' => 'gma', 'Glyma.17G247200' => 'gma', 'Glyma.18G120100' => 'gma', 'Glyma.20G176000' => 'gma', 'Gohir.A01G063600' => 'ghi', 'Gohir.A01G170301' => 'ghi', 'Gohir.A02G060500' => 'ghi', 'Gohir.A05G133850' => 'ghi', 'Gohir.A05G161400' => 'ghi', 'Gohir.A06G012900' => 'ghi', 'Gohir.A06G035901' => 'ghi', 'Gohir.A06G127100' => 'ghi', 'Gohir.A06G210500' => 'ghi', 'Gohir.A08G008650' => 'ghi', 'Gohir.A09G072700' => 'ghi', 'Gohir.A09G088301' => 'ghi', 'Gohir.A10G040600' => 'ghi', 'Gohir.A12G036300' => 'ghi', 'Gohir.A12G143350' => 'ghi', 'Gohir.A12G165500' => 'ghi', 'Gohir.A13G145700' => 'ghi', 'Gohir.D01G050000' => 'ghi', 'Gohir.D01G051366' => 'ghi', 'Gohir.D01G161350' => 'ghi', 'Gohir.D02G065900' => 'ghi', 'Gohir.D05G164200' => 'ghi', 'Gohir.D05G355500' => 'ghi', 'Gohir.D06G010400' => 'ghi', 'Gohir.D06G111250' => 'ghi', 'Gohir.D06G132000' => 'ghi', 'Gohir.D06G210500' => 'ghi', 'Gohir.D07G165675' => 'ghi', 'Gohir.D08G062240' => 'ghi', 'Gohir.D08G086101' => 'ghi', 'Gohir.D08G138060' => 'ghi', 'Gohir.D09G072300' => 'ghi', 'Gohir.D10G041400' => 'ghi', 'Gohir.D11G191020' => 'ghi', 'Gohir.D11G212066' => 'ghi', 'Gohir.D12G036300' => 'ghi', 'Gohir.D12G168600' => 'ghi', 'Gohir.D13G150600' => 'ghi', 'Gorai.001G057300' => 'gra', 'Gorai.002G069900' => 'gra', 'Gorai.002G200000' => 'gra', 'Gorai.003G067600' => 'gra', 'Gorai.005G074800' => 'gra', 'Gorai.006G087300' => 'gra', 'Gorai.008G037500' => 'gra', 'Gorai.008G181400' => 'gra', 'Gorai.009G169400' => 'gra', 'Gorai.009G387900' => 'gra', 'Gorai.010G013300' => 'gra', 'Gorai.010G153800' => 'gra', 'Gorai.010G255800' => 'gra', 'Gorai.011G043700' => 'gra', 'Gorai.011G198900' => 'gra', 'Gorai.013G168400' => 'gra', 'GSVIVG01005212001' => 'vvi', 'GSVIVG01006163001' => 'vvi', 'GSVIVG01009625001' => 'vvi', 'GSVIVG01014338001' => 'vvi', 'GSVIVG01020005001' => 'vvi', 'GSVIVG01021450001' => 'vvi', 'GSVIVG01023975001' => 'vvi', 'GSVIVG01034490001' => 'vvi', 'HanXRQChr04g0112071' => 'han', 'HanXRQChr05g0131151' => 'han', 'HanXRQChr09g0262371' => 'han', 'HanXRQChr09g0268401' => 'han', 'HanXRQChr10g0279241' => 'han', 'HanXRQChr10g0297961' => 'han', 'HanXRQChr11g0326231' => 'han', 'HanXRQChr11g0328471' => 'han', 'HanXRQChr16g0507941' => 'han', 'HanXRQChr17g0560211' => 'han', 'Haze_02108' => 'cav', 'Haze_02428' => 'cav', 'Haze_05593' => 'cav', 'Haze_06448' => 'cav', 'Haze_09427' => 'cav', 'Haze_12022' => 'cav', 'Haze_17612' => 'cav', 'Haze_17928' => 'cav', 'Hma1.2p1_0032F.1_g019250' => 'hma', 'Hma1.2p1_0163F.1_g072690' => 'hma', 'Hma1.2p1_0265F.1_g106710' => 'hma', 'Hma1.2p1_0286F.1_g113970' => 'hma', 'Hma1.2p1_0363F.1_g136640' => 'hma', 'Hma1.2p1_0584F.1_g183470' => 'hma', 'Hma1.2p1_0885F.1_g232570' => 'hma', 'HPP92_006022' => 'vpl', 'HPP92_007320' => 'vpl', 'HPP92_011521' => 'vpl', 'HPP92_019387' => 'vpl', 'HPP92_024038' => 'vpl', 'Hund05891' => 'sun', 'Hund06450' => 'sun', 'Hund12053' => 'sun', 'Hund16800' => 'sun', 'Hund21222' => 'sun', 'Hund22896' => 'sun', 'Hund23746' => 'sun', 'Hund27083' => 'sun', 'Lalb_Chr02g0141831' => 'lal', 'Lalb_Chr02g0141841' => 'lal', 'Lalb_Chr05g0220411' => 'lal', 'Lalb_Chr06g0162081' => 'lal', 'Lalb_Chr09g0327651' => 'lal', 'Lalb_Chr13g0295051' => 'lal', 'Lalb_Chr15g0086801' => 'lal', 'Lalb_Chr16g0383781' => 'lal', 'Lalb_Chr16g0383791' => 'lal', 'Lalb_Chr18g0055441' => 'lal', 'Lalb_Chr18g0059611' => 'lal', 'Lalb_Chr20g0109661' => 'lal', 'Lalb_Chr20g0109831' => 'lal', 'Lalb_Chr20g0121871' => 'lal', 'Lalb_Chr22g0355361' => 'lal', 'Lalb_Chr25g0286371' => 'lal', 'Lj1A1187G43' => 'lonja', 'Lj1A1205T50' => 'lonja', 'Lj1A800G33' => 'lonja', 'Lj1C1187T7' => 'lonja', 'Lj1C843T11' => 'lonja', 'Lj1g0010940' => 'lja', 'Lj2A288T69' => 'lonja', 'Lj3g0024276' => 'lja', 'Lj4A47T76' => 'lonja', 'Lj4g0005805' => 'lja', 'Lj4g0006097' => 'lja', 'Lj4g0008528' => 'lja', 'Lj4g0024907' => 'lja', 'Lj5g0012472' => 'lja', 'Lj5g0018648' => 'lja', 'Lj6C789G1' => 'lonja', 'Lj6g0004000' => 'lja', 'Lj7A292G67' => 'lonja', 'Lj7A292T64' => 'lonja', 'Lj9A400T58' => 'lonja', 'Lsat_1_v5_gn_1_126181' => 'lsa', 'Lsat_1_v5_gn_4_123041' => 'lsa', 'Lsat_1_v5_gn_4_133620' => 'lsa', 'Lsat_1_v5_gn_4_53221' => 'lsa', 'Lsat_1_v5_gn_4_71961' => 'lsa', 'Lsat_1_v5_gn_7_105241' => 'lsa', 'Lsat_1_v5_gn_7_21361' => 'lsa', 'Lsat_1_v5_gn_7_28860' => 'lsa', 'Lsat_1_v5_gn_7_31260' => 'lsa', 'Lsat_1_v5_gn_8_52801' => 'lsa', 'Manes.02G191400' => 'mes', 'Manes.03G110100' => 'mes', 'Manes.04G071100' => 'mes', 'Manes.05G100500' => 'mes', 'Manes.05G164700' => 'mes', 'Manes.15G087000' => 'mes', 'Manes.15G121500' => 'mes', 'Manes.16G028300' => 'mes', 'Manes.17G046100' => 'mes', 'Manes.17G069800' => 'mes', 'Manes.18G100500' => 'mes', 'Mapoly0002s0109' => 'mpo', 'Mapoly0024s0007' => 'mpo', 'Mapoly0089s0032' => 'mpo', 'MBI04_g42241_MAGBIO' => 'mbi', 'MBI05_g11988_MAGBIO' => 'mbi', 'MBI05_g35452_MAGBIO' => 'mbi', 'MBI07_g30179_MAGBIO' => 'mbi', 'MBI07_g35859_MAGBIO' => 'mbi', 'MBI07_g35860_MAGBIO' => 'mbi', 'MBI07_g37166_MAGBIO' => 'mbi', 'MBI08_g18172_MAGBIO' => 'mbi', 'MBI09_g08441_MAGBIO' => 'mbi', 'MBI13_g01676_MAGBIO' => 'mbi', 'MBI14_g42955_MAGBIO' => 'mbi', 'MBI16_g13161_MAGBIO' => 'mbi', 'MBI17_g27204_MAGBIO' => 'mbi', 'MBI19_g21595_MAGBIO' => 'mbi', 'MD00G1148400' => 'mdo', 'MD02G1301200' => 'mdo', 'MD03G1227800' => 'mdo', 'MD05G1041100' => 'mdo', 'MD05G1124800' => 'mdo', 'MD05G1284000' => 'mdo', 'MD05G1338800' => 'mdo', 'MD05G1338900' => 'mdo', 'MD07G1022800' => 'mdo', 'MD10G1047500' => 'mdo', 'MD10G1127500' => 'mdo', 'MD10G1262300' => 'mdo', 'MD10G1293800' => 'mdo', 'MD16G1074300' => 'mdo', 'Medtr1g021670' => 'mtr', 'Medtr1g096320' => 'mtr', 'Medtr2g013690' => 'mtr', 'Medtr2g019450' => 'mtr', 'Medtr2g085170' => 'mtr', 'Medtr4g088785' => 'mtr', 'Medtr8g055930' => 'mtr', 'Medtr8g085850' => 'mtr', 'MELO3C002605.2' => 'cme', 'MELO3C003891.2' => 'cme', 'MELO3C004012.2' => 'cme', 'MELO3C007134.2' => 'cme', 'MELO3C008118.2' => 'cme', 'MELO3C016700.2' => 'cme', 'MELO3C024127.2' => 'cme', 'MELO3C033361.2' => 'cme', 'MELO3C033362.2' => 'cme', 'Migut.C00430' => 'egut', 'Migut.C01246' => 'egut', 'Migut.E00101' => 'egut', 'Migut.H01486' => 'egut', 'Migut.H01939' => 'egut', 'Migut.K00360' => 'egut', 'Migut.M00910' => 'egut', 'Migut.M01139' => 'egut', 'Migut.N02677' => 'egut', 'MSTRG.13252' => 'ama', 'MSTRG.14701' => 'ama', 'MSTRG.1521' => 'ama', 'MSTRG.15884' => 'ama', 'MSTRG.16242' => 'ama', 'MSTRG.22285' => 'ama', 'MSTRG.22444' => 'ama', 'MSTRG.2349' => 'ama', 'MSTRG.26308' => 'ama', 'MSTRG.28296' => 'ama', 'MSTRG.9895' => 'ama', 'Nitab4.5_0000110g0060' => 'nta', 'Nitab4.5_0000420g0130' => 'nta', 'Nitab4.5_0000422g0030' => 'nta', 'Nitab4.5_0000560g0180' => 'nta', 'Nitab4.5_0000703g0100' => 'nta', 'Nitab4.5_0000786g0200' => 'nta', 'Nitab4.5_0001336g0020' => 'nta', 'Nitab4.5_0001796g0030' => 'nta', 'Nitab4.5_0003348g0060' => 'nta', 'Nitab4.5_0003698g0040' => 'nta', 'Nitab4.5_0003942g0090' => 'nta', 'Nitab4.5_0004775g0070' => 'nta', 'Nitab4.5_0004864g0030' => 'nta', 'Nitab4.5_0005615g0020' => 'nta', 'Nitab4.5_0009288g0030' => 'nta', 'Nitab4.5_0009341g0010' => 'nta', 'Nitab4.5_0009535g0010' => 'nta', 'Nn1g03995' => 'nnu', 'Nn1g04100' => 'nnu', 'Nn1g06530' => 'nnu', 'Nn3g16404' => 'nnu', 'Nn3g17212' => 'nnu', 'Nn3g20776' => 'nnu', 'Nn3g21923' => 'nnu', 'Nn5g27737' => 'nnu', 'Nn5g29461' => 'nnu', 'Nn7g38355' => 'nnu', 'Nn8g39873' => 'nnu', 'Oeu000548.2' => 'oeu', 'Oeu004672.1' => 'oeu', 'Oeu015605.2' => 'oeu', 'Oeu016092.1' => 'oeu', 'Oeu017879.3' => 'oeu', 'Oeu024910.1' => 'oeu', 'Oeu028965.1' => 'oeu', 'Oeu031269.1' => 'oeu', 'Oeu031270.1' => 'oeu', 'Oeu032535.1' => 'oeu', 'Oeu034151.1' => 'oeu', 'Oeu034152.1' => 'oeu', 'Oeu034588.2' => 'oeu', 'Oeu050846.1' => 'oeu', 'Oeu050849.2' => 'oeu', 'Oeu051063.2' => 'oeu', 'Oeu052368.1' => 'oeu', 'Oeu052370.1' => 'oeu', 'Os01g0210400' => 'osa', 'Os01g0304300' => 'osa', 'Os01g0749100' => 'osa', 'Os02g0745800' => 'osa', 'Os03g0769050' => 'osa', 'Os05g0531500' => 'osa', 'Os06g0724300' => 'osa', 'Os11g0198100' => 'osa', 'Peaxi162Scf00069g01425' => 'pax', 'Peaxi162Scf00280g00811' => 'pax', 'Peaxi162Scf00310g00615' => 'pax', 'Peaxi162Scf00362g00542' => 'pax', 'Peaxi162Scf00461g00310' => 'pax', 'Peaxi162Scf00530g00118' => 'pax', 'Peaxi162Scf00541g00057' => 'pax', 'Peaxi162Scf00661g00017' => 'pax', 'Peaxi162Scf00926g00027' => 'pax', 'Peaxi162Scf01064g00263' => 'pax', 'Peaxi162Scf01211g00135' => 'pax', 'PGR004G2336' => 'pgr', 'PGR042G0327' => 'pgr', 'PGR042G1957' => 'pgr', 'PGR042G2003' => 'pgr', 'PGR042G3929' => 'pgr', 'PGR083G1137' => 'pgr', 'PGR083G1364' => 'pgr', 'PGSC0003DMG400003381' => 'stu', 'PGSC0003DMG400003417' => 'stu', 'PGSC0003DMG400008981' => 'stu', 'PGSC0003DMG400012417' => 'stu', 'PGSC0003DMG400012823' => 'stu', 'PGSC0003DMG400016885' => 'stu', 'PGSC0003DMG400022812' => 'stu', 'PGSC0003DMG400029726' => 'stu', 'PGSC0003DMG401009243' => 'stu', 'PGSC0003DMG401031505' => 'stu', 'PGSC0003DMG402031505' => 'stu', 'Phvul.001G017600' => 'pvu', 'Phvul.002G193500' => 'pvu', 'Phvul.002G228900' => 'pvu', 'Phvul.002G236800' => 'pvu', 'Phvul.003G049500' => 'pvu', 'Phvul.005G072000' => 'pvu', 'Phvul.006G164800' => 'pvu', 'Phvul.006G185100' => 'pvu', 'Phvul.007G090000' => 'pvu', 'Potri.001G399800' => 'ptr', 'Potri.002G149900' => 'ptr', 'Potri.004G044100' => 'ptr', 'Potri.004G177600' => 'ptr', 'Potri.009G138000' => 'ptr', 'Potri.010G094000' => 'ptr', 'Potri.011G053000' => 'ptr', 'Potri.011G119300' => 'ptr', 'Potri.013G113700' => 'ptr', 'Potri.018G107800' => 'ptr', 'Potri.019G084100' => 'ptr', 'Pp3c14_23720' => 'ppa', 'Pp3c16_6340' => 'ppa', 'Pp3c23_13420' => 'ppa', 'Pp3c24_2740' => 'ppa', 'Pp3c25_860' => 'ppa', 'Pp3c8_21750' => 'ppa', 'Prupe.1G273000' => 'ppe', 'Prupe.1G273700' => 'ppe', 'Prupe.1G274100' => 'ppe', 'Prupe.2G023300' => 'ppe', 'Prupe.4G048000' => 'ppe', 'Prupe.4G080400' => 'ppe', 'Prupe.4G181200' => 'ppe', 'Prupe.8G056900' => 'ppe', 'Prupe.8G168700' => 'ppe', 'Psat1g189080' => 'psa', 'Psat1g204760' => 'psa', 'Psat4g175560' => 'psa', 'Psat4g177720' => 'psa', 'Psat5g244240' => 'psa', 'Psat6g010720' => 'psa', 'Psat6g187200' => 'psa', 'Psat7g072040' => 'psa', 'PSO017G3501' => 'pso', 'PSO063G2148' => 'pso', 'PSO063G5608' => 'pso', 'PSO210G6392' => 'pso', 'PSO541G2319' => 'pso', 'PSO541G2836' => 'pso', 'PSO541G4012' => 'pso', 'PSO541G6253' => 'pso', 'PSO675G0580' => 'pso', 'PSO675G0856' => 'pso', 'PSO675G5635' => 'pso', 'PSO675G9157' => 'pso', 'PSO832G1660' => 'pso', 'PSO832G1969' => 'pso', 'QL02p007186' => 'qlo', 'QL02p033904' => 'qlo', 'QL03p064391' => 'qlo', 'QL05p040593' => 'qlo', 'QL05p058242' => 'qlo', 'QL08p021825' => 'qlo', 'QL11p004981' => 'qlo', 'RcHm_v2.0_Chr1g0318301' => 'rch', 'RcHm_v2.0_Chr4g0418501' => 'rch', 'RcHm_v2.0_Chr4g0439971' => 'rch', 'RcHm_v2.0_Chr5g0008541' => 'rch', 'RcHm_v2.0_Chr5g0014101' => 'rch', 'RcHm_v2.0_Chr5g0014131' => 'rch', 'RcHm_v2.0_Chr5g0033621' => 'rch', 'RcHm_v2.0_Chr6g0272041' => 'rch', 'RcHm_v2.0_Chr6g0278831' => 'rch', 'Rhsim02G0130400' => 'rsi', 'Rhsim02G0171100' => 'rsi', 'Rhsim05G0053000' => 'rsi', 'Rhsim05G0053100' => 'rsi', 'Rhsim06G0096500' => 'rsi', 'Rhsim06G0096600' => 'rsi', 'Rhsim06G0199100' => 'rsi', 'Rhsim12G0062300' => 'rsi', 'Rhsim12G0062800' => 'rsi', 'Sabra02G0118600' => 'sbr', 'Sabra04G0027300' => 'sbr', 'Sabra04G0119500' => 'sbr', 'Sabra08G0112500' => 'sbr', 'Sabra11G0036800' => 'sbr', 'Sabra11G0103800' => 'sbr', 'Sabra13G0096300' => 'sbr', 'Sabra16G0262300' => 'sbr', 'Sabra18G0091700' => 'sbr', 'Sabra19G0095400' => 'sbr', 'SalBow6G3080' => 'sbo', 'SalBow7G1157' => 'sbo', 'SalBow7G2123' => 'sbo', 'SalBow7G2285' => 'sbo', 'SalBow7G3537' => 'sbo', 'SalBow8G2947' => 'sbo', 'SalBow8G4463' => 'sbo', 'SalBow8G5466' => 'sbo', 'Sc01g0001750' => 'sci', 'Sc02g0006640' => 'sci', 'Sc02g0006670' => 'sci', 'Sc04g0008220' => 'sci', 'Sc05g0006190' => 'sci', 'Sc08g0002760' => 'sci', 'Sc17g0006170' => 'sci', 'Sc22g0002050' => 'sci', 'Sc23g0001190' => 'sci', 'Sc24g0000980' => 'sci', 'Sed0006245' => 'sed', 'Sed0007543' => 'sed', 'Sed0009411' => 'sed', 'Sed0010765' => 'sed', 'Sed0012944' => 'sed', 'Sed0014682' => 'sed', 'Sed0016174' => 'sed', 'Sed0016796' => 'sed', 'Sed0020317' => 'sed', 'Sed0021467' => 'sed', 'SEGI_01316' => 'sgi', 'SEGI_03374' => 'sgi', 'SEGI_16265' => 'sgi', 'SEGI_18569' => 'sgi', 'SEGI_20351' => 'sgi', 'SEGI_26395' => 'sgi', 'SEGI_29469' => 'sgi', 'SEGI_34771' => 'sgi', 'SEGI_36769' => 'sgi', 'SEGI_37139' => 'sgi', 'SGA_v2.0_scaffold100G29687' => 'sas', 'SGA_v2.0_scaffold118G32472' => 'sas', 'SGA_v2.0_scaffold14G07051' => 'sas', 'SGA_v2.0_scaffold183G39845' => 'sas', 'SGA_v2.0_scaffold1G00174' => 'sas', 'SGA_v2.0_scaffold22G09714' => 'sas', 'SGA_v2.0_scaffold333G48992' => 'sas', 'SGA_v2.0_scaffold46G17491' => 'sas', 'SGA_v2.0_scaffold49G18294' => 'sas', 'SGA_v2.0_scaffold63G21658' => 'sas', 'SHI01741' => 'shi', 'SHI05771' => 'shi', 'SHI18077' => 'shi', 'SHI20525' => 'shi', 'SHI20527' => 'shi', 'SHI20528' => 'shi', 'SMO172G0185' => 'smo', 'SMO198G0020' => 'smo', 'SMO351G0006' => 'smo', 'SMO356G0118' => 'smo', 'SMO358G0296' => 'smo', 'SMO367G0079' => 'smo', 'SMO367G1277' => 'smo', 'Solyc01g014220.3' => 'sly', 'Solyc01g111770.2' => 'sly', 'Solyc02g078180.3' => 'sly', 'Solyc03g006430.3' => 'sly', 'Solyc03g006456.1' => 'sly', 'Solyc03g079860.2' => 'sly', 'Solyc04g079770.3' => 'sly', 'Solyc05g007430.4' => 'sly', 'Solyc07g063150.3' => 'sly', 'Solyc08g016620.3' => 'sly', 'Solyc09g057590.3' => 'sly', 'Solyc09g057600.1' => 'sly', 'Solyc10g009050.3' => 'sly', 'Solyc11g017420.2' => 'sly', 'Sopen01g053810' => 'spe', 'Sopen02g023040' => 'spe', 'Sopen03g002440' => 'spe', 'Sopen04g033350' => 'spe', 'Sopen05g003310' => 'spe', 'Sopen07g004050' => 'spe', 'Sopen07g031340' => 'spe', 'Sopen08g006990' => 'spe', 'Sopen10g004830' => 'spe', 'Sopen11g009370' => 'spe', 'Sp1g24450' => 'spa', 'Sp1g29670' => 'spa', 'Sp1g39600' => 'spa', 'Sp2g11080' => 'spa', 'Sp2g13970' => 'spa', 'Sp4g16130' => 'spa', 'Sp6g13080' => 'spa', 'Sp7g37270' => 'spa', 'TAR371G0065' => 'tar', 'TAR376G0340' => 'tar', 'TAR376G0435' => 'tar', 'TAR381G0002' => 'tar', 'TAR381G1236' => 'tar', 'TAR624G0055' => 'tar', 'TAR624G0324' => 'tar', 'TAR624G0696' => 'tar', 'TAR624G0906' => 'tar', 'TAR625G0107' => 'tar', 'TAR626G0015' => 'tar', 'TAR626G1356' => 'tar', 'TAR627G0888' => 'tar', 'TAR628G0399' => 'tar', 'TAR628G1327' => 'tar', 'TAR629G2831' => 'tar', 'TAR629G2874' => 'tar', 'TAR633G1432' => 'tar', 'TAR633G2771' => 'tar', 'THA.LOC104803394' => 'tha', 'THA.LOC104805153' => 'tha', 'THA.LOC104806784' => 'tha', 'THA.LOC104810473' => 'tha', 'THA.LOC104813100' => 'tha', 'THA.LOC104814215' => 'tha', 'THA.LOC104815554' => 'tha', 'THA.LOC104820544' => 'tha', 'THA.LOC104824754' => 'tha', 'THA.LOC104827717' => 'tha', 'Thecc.02G031400' => 'tca', 'Thecc.02G055900' => 'tca', 'Thecc.02G350800' => 'tca', 'Thecc.06G150900' => 'tca', 'Thecc.06G186600' => 'tca', 'Thecc.07G089600' => 'tca', 'Thecc.08G020400' => 'tca', 'Thecc.08G182100' => 'tca', 'Thhalv10000873m.g' => 'esa', 'Thhalv10004185m.g' => 'esa', 'Thhalv10006981m.g' => 'esa', 'Thhalv10007204m.g' => 'esa', 'Thhalv10011374m.g' => 'esa', 'Thhalv10013482m.g' => 'esa', 'Thhalv10017801m.g' => 'esa', 'Thhalv10024983m.g' => 'esa', 'TPR.G12072' => 'tpr', 'TPR.G15769' => 'tpr', 'TPR.G16504' => 'tpr', 'TPR.G16506' => 'tpr', 'TPR.G24345' => 'tpr', 'TPR.G26666' => 'tpr', 'TPR.G27320' => 'tpr', 'TPR.G31819' => 'tpr', 'TPR.G38879' => 'tpr', 'TPR.G39015' => 'tpr', 'TPR.G8819' => 'tpr', 'TWI09G0924' => 'twi', 'TWI12G0811' => 'twi', 'TWI12G1294' => 'twi', 'TWI31G0150' => 'twi', 'TWI36G1262' => 'twi', 'TWI38G1287' => 'twi', 'TWI38G1633' => 'twi', 'TWI38G1982' => 'twi', 'TWI39G0116' => 'twi', 'TWI60G1011' => 'twi', 'TWI63G0171' => 'twi', 'TWI73G0839' => 'twi', 'TWI79G1511' => 'twi', 'unitig_0.g915' => 'ugi', 'unitig_0.g916' => 'ugi', 'unitig_21.g20219' => 'ugi', 'unitig_21.g20416' => 'ugi', 'unitig_578.g16132' => 'ugi', 'unitig_578.g16718' => 'ugi', 'unitig_62.g23481' => 'ugi', 'unitig_744.g24535' => 'ugi', 'unitig_749.g13525' => 'ugi', 'vmacro01248' => 'vma', 'vmacro02290' => 'vma', 'vmacro10946' => 'vma', 'vmacro11865' => 'vma', 'vmacro12493' => 'vma', 'vmacro17322' => 'vma', 'vmacro21599' => 'vma', 'vmacro23041' => 'vma', 'VMungo0251G0004' => 'vmu', 'VMungo0251G2639' => 'vmu', 'VMungo0251G2967' => 'vmu', 'VMungo0540G0864' => 'vmu', 'VMungo0540G1569' => 'vmu', 'VMungo0647G0317' => 'vmu', 'VMungo0720G1373' => 'vmu', 'VMungo0720G1508' => 'vmu', 'VMungo1080G0485' => 'vmu', 'VMungo1215G3177' => 'vmu', 'Zm00001eb112600' => 'zma', 'Zm00001eb120220' => 'zma', 'Zm00001eb153240' => 'zma', 'Zm00001eb168880' => 'zma', 'Zm00001eb213920' => 'zma', 'Zm00001eb228280' => 'zma', 'Zm00001eb254580' => 'zma', 'Zm00001eb272180' => 'zma', 'Zm00001eb293190' => 'zma', 'Zm00001eb322930' => 'zma', 'Zm00001eb353360' => 'zma', 'Zm00001eb353390' => 'zma', 'Zm00001eb353430' => 'zma', 'Zm00001eb353440' => 'zma', 'Zm00001eb353780' => 'zma' ) $gf_id = 'HOM05D000499' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000499' ) $data_identifier = 'HOM05D000499' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 29, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 12, 'amhyb' => (int) 8, 'aly' => (int) 12, 'aox' => (int) 9, 'arhy' => (int) 26, 'ath' => (int) 8, 'atr' => (int) 7, 'acertr' => (int) 10, 'cqu' => (int) 15, 'bca' => (int) 29, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 11, 'cansat' => (int) 8, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 9, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 8, 'cpa' => (int) 10, 'csa' => (int) 7, 'camsi' => (int) 20, 'dca' => (int) 8, 'din' => (int) 12, 'dzi' => (int) 14, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 6, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 38, 'gra' => (int) 16, 'vvi' => (int) 8, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 5, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 11, 'lja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 11, 'mpo' => (int) 3, 'mbi' => (int) 14, 'mdo' => (int) 14, 'mtr' => (int) 8, 'cme' => (int) 9, 'egut' => (int) 9, 'ama' => (int) 11, 'nta' => (int) 17, 'nnu' => (int) 11, 'oeu' => (int) 18, 'osa' => (int) 8, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 6, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 9, 'rsi' => (int) 9, 'sbr' => (int) 10, 'sbo' => (int) 8, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 10, 'sas' => (int) 10, 'shi' => (int) 6, 'smo' => (int) 7, 'sly' => (int) 14, 'spe' => (int) 10, 'spa' => (int) 8, 'tar' => (int) 19, 'tha' => (int) 10, 'tca' => (int) 8, 'esa' => (int) 8, 'tpr' => (int) 11, 'twi' => (int) 13, 'ugi' => (int) 9, 'vma' => (int) 8, 'vmu' => (int) 10, 'zma' => (int) 15 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb353780' $species_info = array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ) $local_species = 'cde' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000499', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1066', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p29780' => 'bna', 'A02p33180' => 'bna', 'A03p16470' => 'bna', 'A03p66010' => 'bna', 'A04p25970' => 'bna', 'A06p01270' => 'bna', 'A06p46080' => 'bna', 'A07p11400' => 'bna', 'A08p01840' => 'bna', 'A08p08230' => 'bna', 'A08p25740' => 'bna', 'A09p32070' => 'bna', 'A09p37830' => 'bna', 'A09p42840' => 'bna', 'A09p42850' => 'bna', 'Aa31LG10G2060' => 'aar', 'Aa31LG2G7410' => 'aar', 'Aa31LG6G10200' => 'aar', 'Aa31LG6G16680' => 'aar', 'Aa31LG6G8470' => 'aar', 'Aa31LG9G12730' => 'aar', 'Aa31LG9G13680' => 'aar', 'Aa31LG9G14920' => 'aar', 'Aa31LG9G6650' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4977' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5467' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3254' => 'aag', 'Actinidia02578' => 'ach', 'Actinidia07693' => 'ach', 'Actinidia08413' => 'ach', 'Actinidia08414' => 'ach', 'Actinidia15289' => 'ach', 'Actinidia19871' => 'ach', 'Actinidia21475' => 'ach', 'Actinidia22576' => 'ach', 'Actinidia28327' => 'ach', 'Actinidia32491' => 'ach', 'Actinidia39463' => 'ach', 'Actinidia39571' => 'ach', 'Ah.01g013750' => 'amhyb', 'Ah.01g023210' => 'amhyb', 'Ah.04g164850' => 'amhyb', 'Ah.05g178060' => 'amhyb', 'Ah.07g204270' => 'amhyb', 'Ah.07g208480' => 'amhyb', 'Ah.09g237410' => 'amhyb', 'Ah.14g089460' => 'amhyb', 'AL1G41790' => 'aly', 'AL1G49050' => 'aly', 'AL1G53810' => 'aly', 'AL1G61400' => 'aly', 'AL4G18580' => 'aly', 'AL5G12510' => 'aly', 'AL5G12540' => 'aly', 'AL6G43230' => 'aly', 'AL7G10370' => 'aly', 'AL7G19250' => 'aly', 'AL8G12240' => 'aly', 'AL8G18540' => 'aly', 'Aqoxy1G02409' => 'aox', 'Aqoxy2G03993' => 'aox', 'Aqoxy3G03357' => 'aox', 'Aqoxy4G00785' => 'aox', 'Aqoxy5G02598' => 'aox', 'Aqoxy6G00132' => 'aox', 'Aqoxy7G01776' => 'aox', 'Aqoxy7G02316' => 'aox', 'Aqoxy7G03973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.12AFKW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B8730' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27IQR1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3F75VG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3RE0GA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41TCQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.527VTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FIR39' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5W8UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DA38EV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ63HS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H1I32C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HC27T5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4M8AP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7N3CZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9UVDZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LS1NQA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT1D4B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SKC4TM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCFV76' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF9Q1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQWD9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1ZM88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WE07RT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YCK7VH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJE6Q6' => 'arhy', 'AT1G28240' => 'ath', 'AT1G34550' => 'ath', 'AT1G53040' => 'ath', 'AT2G02910' => 'ath', 'AT4G09630' => 'ath', 'AT4G38500' => 'ath', 'AT5G42660' => 'ath', 'AT5G46220' => 'ath', 'ATR0152G026' => 'atr', 'ATR0564G343' => 'atr', 'ATR0706G151' => 'atr', 'ATR0733G207' => 'atr', 'ATR0751G234' => 'atr', 'ATR0807G048' => 'atr', 'ATR1091G084' => 'atr', 'Atru.chr10.1229' => 'acertr', 'Atru.chr10.1230' => 'acertr', 'Atru.chr10.1874' => 'acertr', 'Atru.chr11.1808' => 'acertr', 'Atru.chr13.1795' => 'acertr', 'Atru.chr13.570' => 'acertr', 'Atru.chr2.2608' => 'acertr', 'Atru.chr2.2609' => 'acertr', 'Atru.chr5.3428' => 'acertr', 'Atru.chr8.1171' => 'acertr', 'AUR62004651' => 'cqu', 'AUR62008675' => 'cqu', 'AUR62010014' => 'cqu', 'AUR62013004' => 'cqu', 'AUR62014825' => 'cqu', 'AUR62015015' => 'cqu', 'AUR62015151' => 'cqu', 'AUR62017020' => 'cqu', 'AUR62019422' => 'cqu', 'AUR62023570' => 'cqu', 'AUR62025571' => 'cqu', 'AUR62029098' => 'cqu', 'AUR62033863' => 'cqu', 'AUR62034296' => 'cqu', 'AUR62040075' => 'cqu', 'BcaB02g07334' => 'bca', 'BcaB02g10575' => 'bca', 'BcaB03g12119' => 'bca', 'BcaB03g12120' => 'bca', 'BcaB03g13945' => 'bca', 'BcaB04g17123' => 'bca', 'BcaB04g17867' => 'bca', 'BcaB04g19839' => 'bca', 'BcaB07g30317' => 'bca', 'BcaB07g32432' => 'bca', 'BcaB07g33362' => 'bca', 'BcaB08g36611' => 'bca', 'BcaC01g00028' => 'bca', 'BcaC01g01356' => 'bca', 'BcaC01g02034' => 'bca', 'BcaC01g06051' => 'bca', 'BcaC03g16839' => 'bca', 'BcaC03g17176' => 'bca', 'BcaC05g26829' => 'bca', 'BcaC06g31490' => 'bca', 'BcaC06g35344' => 'bca', 'BcaC06g36570' => 'bca', 'BcaC07g37537' => 'bca', 'BcaC08g43491' => 'bca', 'BcaC08g43773' => 'bca', 'BcaNung00234' => 'bca', 'BcaNung01982' => 'bca', 'BcaNung03707' => 'bca', 'BcaNung06454' => 'bca', 'BolC2t10762H' => 'bol', 'BolC2t11191H' => 'bol', 'BolC3t14322H' => 'bol', 'BolC3t19747H' => 'bol', 'BolC3t21425H' => 'bol', 'BolC4t27800H' => 'bol', 'BolC5t31423H' => 'bol', 'BolC6t35951H' => 'bol', 'BolC6t36282H' => 'bol', 'BolC7t40678H' => 'bol', 'BolC7t40679H' => 'bol', 'BolC7t42222H' => 'bol', 'BolC7t43492H' => 'bol', 'BolC7t46785H' => 'bol', 'BolC8t47853H' => 'bol', 'BolC9t56805H' => 'bol', 'BraA02t08000Z' => 'bra', 'BraA02t08341Z' => 'bra', 'BraA03t10936Z' => 'bra', 'BraA03t15657Z' => 'bra', 'BraA04t18100Z' => 'bra', 'BraA05t20523Z' => 'bra', 'BraA06t23353Z' => 'bra', 'BraA06t27473Z' => 'bra', 'BraA06t27769Z' => 'bra', 'BraA07t28928Z' => 'bra', 'BraA08t32236Z' => 'bra', 'BraA08t32841Z' => 'bra', 'BraA08t34524Z' => 'bra', 'BraA09t38742Z' => 'bra', 'BraA09t39295Z' => 'bra', 'C02p47180' => 'bna', 'C02p50990' => 'bna', 'C03p19360' => 'bna', 'C03p74950' => 'bna', 'C03p91000' => 'bna', 'C04p63260' => 'bna', 'C05p27050' => 'bna', 'C06p08750' => 'bna', 'C06p11490' => 'bna', 'C07p02820' => 'bna', 'C07p17180' => 'bna', 'C07p29440' => 'bna', 'C07p63730' => 'bna', 'C09p39260' => 'bna', 'CAN.G1164.34' => 'can', 'CAN.G1164.39' => 'can', 'CAN.G1530.3' => 'can', 'CAN.G162.61' => 'can', 'CAN.G176.6' => 'can', 'CAN.G289.49' => 'can', 'CAN.G370.21' => 'can', 'CAN.G370.22' => 'can', 'CAN.G371.117' => 'can', 'CAN.G58.37' => 'can', 'CAN.G588.98' => 'can', 'CANSAT21G2266' => 'cansat', 'CANSAT25G2799' => 'cansat', 'CANSAT35G0862' => 'cansat', 'CANSAT35G1704' => 'cansat', 'CANSAT35G1760' => 'cansat', 'CANSAT56G3971' => 'cansat', 'CANSAT56G4116' => 'cansat', 'CANSAT80G1259' => 'cansat', 'CARHR027730' => 'chi', 'CARHR033880' => 'chi', 'CARHR043270' => 'chi', 'CARHR145330' => 'chi', 'CARHR145340' => 'chi', 'CARHR175570' => 'chi', 'CARHR181570' => 'chi', 'CARHR258470' => 'chi', 'CARHR260490' => 'chi', 'CARHR294220' => 'chi', 'Carub.0001s2668' => 'cru', 'Carub.0001s3257' => 'cru', 'Carub.0001s4220' => 'cru', 'Carub.0005s0179' => 'cru', 'Carub.0006s2807' => 'cru', 'Carub.0007s0039' => 'cru', 'Carub.0008s0169' => 'cru', 'Carub.0008s0636' => 'cru', 'Ca_00338_v3' => 'car', 'Ca_00542_v3' => 'car', 'Ca_01844_v3' => 'car', 'Ca_10611_v3' => 'car', 'Ca_13326_v3' => 'car', 'Ca_17944_v3' => 'car', 'Ca_18546_v3' => 'car', 'Ca_24219_v3' => 'car', 'Ca_29972_v3' => 'car', 'CBR_g3681' => 'cbr', 'CBR_g40021' => 'cbr', 'Cc01_g08140' => 'ccan', 'Cc02_g13410' => 'ccan', 'Cc02_g37480' => 'ccan', 'Cc05_g12030' => 'ccan', 'Cc09_g03370' => 'ccan', 'Cc09_g10300' => 'ccan', 'Cc10_g03530' => 'ccan', 'Cc10_g11380' => 'ccan', 'CDE01G0176' => 'cde', 'CDE02G0675' => 'cde', 'CDE02G0942' => 'cde', 'CDE02G1153' => 'cde', 'CDE02G4177' => 'cde', 'CDE04G2117' => 'cde', 'CDE04G2736' => 'cde', 'CDE08G1161' => 'cde', 'CDE09G1238' => 'cde', 'Cfa000467' => 'cfa', 'Cfa000947' => 'cfa', 'Cfa004969' => 'cfa', 'Cfa005284' => 'cfa', 'Cfa008993' => 'cfa', 'Cfa018187' => 'cfa', 'Cfa018454' => 'cfa', 'Cfa020585' => 'cfa', 'Ciclev10000424m.g' => 'ccl', 'Ciclev10003605m.g' => 'ccl', 'Ciclev10007828m.g' => 'ccl', 'Ciclev10014620m.g' => 'ccl', 'Ciclev10015169m.g' => 'ccl', 'Ciclev10018291m.g' => 'ccl', 'Ciclev10028256m.g' => 'ccl', 'Ciclev10033822m.g' => 'ccl', 'CiPaw.05G060300' => 'cil', 'CiPaw.05G085000' => 'cil', 'CiPaw.06G083700' => 'cil', 'CiPaw.06G120300' => 'cil', 'CiPaw.09G060500' => 'cil', 'CiPaw.09G123800' => 'cil', 'CiPaw.11G169700' => 'cil', 'CiPaw.12G118300' => 'cil', 'CiPaw.15G071000' => 'cil', 'CiPaw.15G081900' => 'cil', 'ClCG01G024610' => 'cla', 'ClCG03G006070' => 'cla', 'ClCG05G019250' => 'cla', 'ClCG09G009500' => 'cla', 'ClCG11G008200' => 'cla', 'ClCG11G018080' => 'cla', 'COL.COLO4_17373' => 'col', 'COL.COLO4_22994' => 'col', 'COL.COLO4_26389' => 'col', 'COL.COLO4_27170' => 'col', 'COL.COLO4_31074' => 'col', 'COL.COLO4_31465' => 'col', 'COL.COLO4_36438' => 'col', 'COL.COLO4_36439' => 'col', 'Cpa.g.c38781' => 'cpa', 'Cpa.g.sc128.12' => 'cpa', 'Cpa.g.sc166.7' => 'cpa', 'Cpa.g.sc166.8' => 'cpa', 'Cpa.g.sc20.111' => 'cpa', 'Cpa.g.sc27.31' => 'cpa', 'Cpa.g.sc64.36' => 'cpa', 'Cpa.g.sc64.37' => 'cpa', 'Cpa.g.sc66.49' => 'cpa', 'Cpa.g.sc80.64' => 'cpa', 'CsaV3_1G012320' => 'csa', 'CsaV3_2G008480' => 'csa', 'CsaV3_2G033450' => 'csa', 'CsaV3_3G044830' => 'csa', 'CsaV3_4G033710' => 'csa', 'CsaV3_6G051730' => 'csa', 'CsaV3_7G025350' => 'csa', 'CSS0001067' => 'camsi', 'CSS0005996' => 'camsi', 'CSS0006590' => 'camsi', 'CSS0009673' => 'camsi', 'CSS0010201' => 'camsi', 'CSS0010549' => 'camsi', 'CSS0011364' => 'camsi', 'CSS0014473' => 'camsi', 'CSS0014961' => 'camsi', 'CSS0020191' => 'camsi', 'CSS0021165' => 'camsi', 'CSS0022306' => 'camsi', 'CSS0030591' => 'camsi', 'CSS0030696' => 'camsi', 'CSS0032653' => 'camsi', 'CSS0037487' => 'camsi', 'CSS0041102' => 'camsi', 'CSS0041261' => 'camsi', 'CSS0046246' => 'camsi', 'CSS0049256' => 'camsi', 'DCAR_004075' => 'dca', 'DCAR_011538' => 'dca', 'DCAR_019553' => 'dca', 'DCAR_020952' => 'dca', 'DCAR_021739' => 'dca', 'DCAR_027407' => 'dca', 'DCAR_027913' => 'dca', 'DCAR_028066' => 'dca', 'Dinv05899' => 'din', 'Dinv07563' => 'din', 'Dinv08010' => 'din', 'Dinv14125' => 'din', 'Dinv20172' => 'din', 'Dinv30743' => 'din', 'Dinv31229' => 'din', 'Dinv34162' => 'din', 'Dinv36028' => 'din', 'Dinv39368' => 'din', 'Dinv40565' => 'din', 'Dinv41706' => 'din', 'Duzib052G0089' => 'dzi', 'Duzib116G0641' => 'dzi', 'Duzib132G0069' => 'dzi', 'Duzib132G1219' => 'dzi', 'Duzib147G0278' => 'dzi', 'Duzib160G0480' => 'dzi', 'Duzib170G0661' => 'dzi', 'Duzib177G0591' => 'dzi', 'Duzib187G1353' => 'dzi', 'Duzib192G0858' => 'dzi', 'Duzib192G0883' => 'dzi', 'Duzib213G0506' => 'dzi', 'Duzib235G0289' => 'dzi', 'Duzib251G0422' => 'dzi', 'ECA232G3898' => 'eca', 'ECA233G5950' => 'eca', 'ECA234G1699' => 'eca', 'ECA234G2421' => 'eca', 'ECA236G0426' => 'eca', 'ECA236G4331' => 'eca', 'ECA248G2573' => 'eca', 'EL10Ac1g00077' => 'bvu', 'EL10Ac1g01746' => 'bvu', 'EL10Ac2g03464' => 'bvu', 'EL10Ac4g08176' => 'bvu', 'EL10Ac7g17521' => 'bvu', 'EL10Ac8g20386' => 'bvu', 'EL10Ac9g21343' => 'bvu', 'EL10Ac9g22688' => 'bvu', 'Eucgr.B03434' => 'egr', 'Eucgr.D00618' => 'egr', 'Eucgr.E02395' => 'egr', 'Eucgr.F01129' => 'egr', 'Eucgr.F02622' => 'egr', 'Eucgr.F04207' => 'egr', 'FAN01G0570' => 'fan', 'FAN03G3351' => 'fan', 'FAN06G3702' => 'fan', 'FAN07G2149' => 'fan', 'FAN10G3758' => 'fan', 'FAN11G1170' => 'fan', 'FAN11G2050' => 'fan', 'FAN11G2724' => 'fan', 'FAN12G1700' => 'fan', 'FAN12G2028' => 'fan', 'FAN15G1160' => 'fan', 'FAN15G3063' => 'fan', 'FAN16G2540' => 'fan', 'FAN16G3077' => 'fan', 'FAN16G3624' => 'fan', 'FAN17G0221' => 'fan', 'FAN20G2492' => 'fan', 'FAN20G2905' => 'fan', 'FAN21G0548' => 'fan', 'FAN21G1300' => 'fan', 'FAN22G0077' => 'fan', 'FAN22G1315' => 'fan', 'FAN24G1280' => 'fan', 'FAN24G1445' => 'fan', 'FAN24G3527' => 'fan', 'FAN25G0464' => 'fan', 'FAN25G2885' => 'fan', 'FAN25G3270' => 'fan', 'FAN27G1101' => 'fan', 'FAN27G2846' => 'fan', 'FAN27G3524' => 'fan', 'FvH4_2g11770' => 'fve', 'FvH4_2g15630' => 'fve', 'FvH4_3g05570' => 'fve', 'FvH4_3g09110' => 'fve', 'FvH4_3g19940' => 'fve', 'FvH4_4g04821' => 'fve', 'FvH4_4g31480' => 'fve', 'FvH4_7g01740' => 'fve', 'Glyma.05G130400' => 'gma', 'Glyma.05G156400' => 'gma', 'Glyma.07G197000' => 'gma', 'Glyma.08G085151' => 'gma', 'Glyma.08G114500' => 'gma', 'Glyma.08G300400' => 'gma', 'Glyma.10G215800' => 'gma', 'Glyma.12G224400' => 'gma', 'Glyma.13G179300' => 'gma', 'Glyma.13G218151' => 'gma', 'Glyma.13G238800' => 'gma', 'Glyma.13G276900' => 'gma', 'Glyma.14G078200' => 'gma', 'Glyma.15G074500' => 'gma', 'Glyma.15G094100' => 'gma', 'Glyma.17G247200' => 'gma', 'Glyma.18G120100' => 'gma', 'Glyma.20G176000' => 'gma', 'Gohir.A01G063600' => 'ghi', 'Gohir.A01G170301' => 'ghi', 'Gohir.A02G060500' => 'ghi', 'Gohir.A05G133850' => 'ghi', 'Gohir.A05G161400' => 'ghi', 'Gohir.A06G012900' => 'ghi', 'Gohir.A06G035901' => 'ghi', 'Gohir.A06G127100' => 'ghi', 'Gohir.A06G210500' => 'ghi', 'Gohir.A08G008650' => 'ghi', 'Gohir.A09G072700' => 'ghi', 'Gohir.A09G088301' => 'ghi', 'Gohir.A10G040600' => 'ghi', 'Gohir.A12G036300' => 'ghi', 'Gohir.A12G143350' => 'ghi', 'Gohir.A12G165500' => 'ghi', 'Gohir.A13G145700' => 'ghi', 'Gohir.D01G050000' => 'ghi', 'Gohir.D01G051366' => 'ghi', 'Gohir.D01G161350' => 'ghi', 'Gohir.D02G065900' => 'ghi', 'Gohir.D05G164200' => 'ghi', 'Gohir.D05G355500' => 'ghi', 'Gohir.D06G010400' => 'ghi', 'Gohir.D06G111250' => 'ghi', 'Gohir.D06G132000' => 'ghi', 'Gohir.D06G210500' => 'ghi', 'Gohir.D07G165675' => 'ghi', 'Gohir.D08G062240' => 'ghi', 'Gohir.D08G086101' => 'ghi', 'Gohir.D08G138060' => 'ghi', 'Gohir.D09G072300' => 'ghi', 'Gohir.D10G041400' => 'ghi', 'Gohir.D11G191020' => 'ghi', 'Gohir.D11G212066' => 'ghi', 'Gohir.D12G036300' => 'ghi', 'Gohir.D12G168600' => 'ghi', 'Gohir.D13G150600' => 'ghi', 'Gorai.001G057300' => 'gra', 'Gorai.002G069900' => 'gra', 'Gorai.002G200000' => 'gra', 'Gorai.003G067600' => 'gra', 'Gorai.005G074800' => 'gra', 'Gorai.006G087300' => 'gra', 'Gorai.008G037500' => 'gra', 'Gorai.008G181400' => 'gra', 'Gorai.009G169400' => 'gra', 'Gorai.009G387900' => 'gra', 'Gorai.010G013300' => 'gra', 'Gorai.010G153800' => 'gra', 'Gorai.010G255800' => 'gra', 'Gorai.011G043700' => 'gra', 'Gorai.011G198900' => 'gra', 'Gorai.013G168400' => 'gra', 'GSVIVG01005212001' => 'vvi', 'GSVIVG01006163001' => 'vvi', 'GSVIVG01009625001' => 'vvi', 'GSVIVG01014338001' => 'vvi', 'GSVIVG01020005001' => 'vvi', 'GSVIVG01021450001' => 'vvi', 'GSVIVG01023975001' => 'vvi', 'GSVIVG01034490001' => 'vvi', 'HanXRQChr04g0112071' => 'han', 'HanXRQChr05g0131151' => 'han', 'HanXRQChr09g0262371' => 'han', 'HanXRQChr09g0268401' => 'han', 'HanXRQChr10g0279241' => 'han', 'HanXRQChr10g0297961' => 'han', 'HanXRQChr11g0326231' => 'han', 'HanXRQChr11g0328471' => 'han', 'HanXRQChr16g0507941' => 'han', 'HanXRQChr17g0560211' => 'han', 'Haze_02108' => 'cav', 'Haze_02428' => 'cav', 'Haze_05593' => 'cav', 'Haze_06448' => 'cav', 'Haze_09427' => 'cav', 'Haze_12022' => 'cav', 'Haze_17612' => 'cav', 'Haze_17928' => 'cav', 'Hma1.2p1_0032F.1_g019250' => 'hma', 'Hma1.2p1_0163F.1_g072690' => 'hma', 'Hma1.2p1_0265F.1_g106710' => 'hma', 'Hma1.2p1_0286F.1_g113970' => 'hma', 'Hma1.2p1_0363F.1_g136640' => 'hma', 'Hma1.2p1_0584F.1_g183470' => 'hma', 'Hma1.2p1_0885F.1_g232570' => 'hma', 'HPP92_006022' => 'vpl', 'HPP92_007320' => 'vpl', 'HPP92_011521' => 'vpl', 'HPP92_019387' => 'vpl', 'HPP92_024038' => 'vpl', 'Hund05891' => 'sun', 'Hund06450' => 'sun', 'Hund12053' => 'sun', 'Hund16800' => 'sun', 'Hund21222' => 'sun', 'Hund22896' => 'sun', 'Hund23746' => 'sun', 'Hund27083' => 'sun', 'Lalb_Chr02g0141831' => 'lal', 'Lalb_Chr02g0141841' => 'lal', 'Lalb_Chr05g0220411' => 'lal', 'Lalb_Chr06g0162081' => 'lal', 'Lalb_Chr09g0327651' => 'lal', 'Lalb_Chr13g0295051' => 'lal', 'Lalb_Chr15g0086801' => 'lal', 'Lalb_Chr16g0383781' => 'lal', 'Lalb_Chr16g0383791' => 'lal', 'Lalb_Chr18g0055441' => 'lal', 'Lalb_Chr18g0059611' => 'lal', 'Lalb_Chr20g0109661' => 'lal', 'Lalb_Chr20g0109831' => 'lal', 'Lalb_Chr20g0121871' => 'lal', 'Lalb_Chr22g0355361' => 'lal', 'Lalb_Chr25g0286371' => 'lal', 'Lj1A1187G43' => 'lonja', 'Lj1A1205T50' => 'lonja', 'Lj1A800G33' => 'lonja', 'Lj1C1187T7' => 'lonja', 'Lj1C843T11' => 'lonja', 'Lj1g0010940' => 'lja', 'Lj2A288T69' => 'lonja', 'Lj3g0024276' => 'lja', 'Lj4A47T76' => 'lonja', 'Lj4g0005805' => 'lja', 'Lj4g0006097' => 'lja', 'Lj4g0008528' => 'lja', 'Lj4g0024907' => 'lja', 'Lj5g0012472' => 'lja', 'Lj5g0018648' => 'lja', 'Lj6C789G1' => 'lonja', 'Lj6g0004000' => 'lja', 'Lj7A292G67' => 'lonja', 'Lj7A292T64' => 'lonja', 'Lj9A400T58' => 'lonja', 'Lsat_1_v5_gn_1_126181' => 'lsa', 'Lsat_1_v5_gn_4_123041' => 'lsa', 'Lsat_1_v5_gn_4_133620' => 'lsa', 'Lsat_1_v5_gn_4_53221' => 'lsa', 'Lsat_1_v5_gn_4_71961' => 'lsa', 'Lsat_1_v5_gn_7_105241' => 'lsa', 'Lsat_1_v5_gn_7_21361' => 'lsa', 'Lsat_1_v5_gn_7_28860' => 'lsa', 'Lsat_1_v5_gn_7_31260' => 'lsa', 'Lsat_1_v5_gn_8_52801' => 'lsa', 'Manes.02G191400' => 'mes', 'Manes.03G110100' => 'mes', 'Manes.04G071100' => 'mes', 'Manes.05G100500' => 'mes', 'Manes.05G164700' => 'mes', 'Manes.15G087000' => 'mes', 'Manes.15G121500' => 'mes', 'Manes.16G028300' => 'mes', 'Manes.17G046100' => 'mes', 'Manes.17G069800' => 'mes', 'Manes.18G100500' => 'mes', 'Mapoly0002s0109' => 'mpo', 'Mapoly0024s0007' => 'mpo', 'Mapoly0089s0032' => 'mpo', 'MBI04_g42241_MAGBIO' => 'mbi', 'MBI05_g11988_MAGBIO' => 'mbi', 'MBI05_g35452_MAGBIO' => 'mbi', 'MBI07_g30179_MAGBIO' => 'mbi', 'MBI07_g35859_MAGBIO' => 'mbi', 'MBI07_g35860_MAGBIO' => 'mbi', 'MBI07_g37166_MAGBIO' => 'mbi', 'MBI08_g18172_MAGBIO' => 'mbi', 'MBI09_g08441_MAGBIO' => 'mbi', 'MBI13_g01676_MAGBIO' => 'mbi', 'MBI14_g42955_MAGBIO' => 'mbi', 'MBI16_g13161_MAGBIO' => 'mbi', 'MBI17_g27204_MAGBIO' => 'mbi', 'MBI19_g21595_MAGBIO' => 'mbi', 'MD00G1148400' => 'mdo', 'MD02G1301200' => 'mdo', 'MD03G1227800' => 'mdo', 'MD05G1041100' => 'mdo', 'MD05G1124800' => 'mdo', 'MD05G1284000' => 'mdo', 'MD05G1338800' => 'mdo', 'MD05G1338900' => 'mdo', 'MD07G1022800' => 'mdo', 'MD10G1047500' => 'mdo', 'MD10G1127500' => 'mdo', 'MD10G1262300' => 'mdo', 'MD10G1293800' => 'mdo', 'MD16G1074300' => 'mdo', 'Medtr1g021670' => 'mtr', 'Medtr1g096320' => 'mtr', 'Medtr2g013690' => 'mtr', 'Medtr2g019450' => 'mtr', 'Medtr2g085170' => 'mtr', 'Medtr4g088785' => 'mtr', 'Medtr8g055930' => 'mtr', 'Medtr8g085850' => 'mtr', 'MELO3C002605.2' => 'cme', 'MELO3C003891.2' => 'cme', 'MELO3C004012.2' => 'cme', 'MELO3C007134.2' => 'cme', 'MELO3C008118.2' => 'cme', 'MELO3C016700.2' => 'cme', 'MELO3C024127.2' => 'cme', 'MELO3C033361.2' => 'cme', 'MELO3C033362.2' => 'cme', 'Migut.C00430' => 'egut', 'Migut.C01246' => 'egut', 'Migut.E00101' => 'egut', 'Migut.H01486' => 'egut', 'Migut.H01939' => 'egut', 'Migut.K00360' => 'egut', 'Migut.M00910' => 'egut', 'Migut.M01139' => 'egut', 'Migut.N02677' => 'egut', 'MSTRG.13252' => 'ama', 'MSTRG.14701' => 'ama', 'MSTRG.1521' => 'ama', 'MSTRG.15884' => 'ama', 'MSTRG.16242' => 'ama', 'MSTRG.22285' => 'ama', 'MSTRG.22444' => 'ama', 'MSTRG.2349' => 'ama', 'MSTRG.26308' => 'ama', 'MSTRG.28296' => 'ama', 'MSTRG.9895' => 'ama', 'Nitab4.5_0000110g0060' => 'nta', 'Nitab4.5_0000420g0130' => 'nta', 'Nitab4.5_0000422g0030' => 'nta', 'Nitab4.5_0000560g0180' => 'nta', 'Nitab4.5_0000703g0100' => 'nta', 'Nitab4.5_0000786g0200' => 'nta', 'Nitab4.5_0001336g0020' => 'nta', 'Nitab4.5_0001796g0030' => 'nta', 'Nitab4.5_0003348g0060' => 'nta', 'Nitab4.5_0003698g0040' => 'nta', 'Nitab4.5_0003942g0090' => 'nta', 'Nitab4.5_0004775g0070' => 'nta', 'Nitab4.5_0004864g0030' => 'nta', 'Nitab4.5_0005615g0020' => 'nta', 'Nitab4.5_0009288g0030' => 'nta', 'Nitab4.5_0009341g0010' => 'nta', 'Nitab4.5_0009535g0010' => 'nta', 'Nn1g03995' => 'nnu', 'Nn1g04100' => 'nnu', 'Nn1g06530' => 'nnu', 'Nn3g16404' => 'nnu', 'Nn3g17212' => 'nnu', 'Nn3g20776' => 'nnu', 'Nn3g21923' => 'nnu', 'Nn5g27737' => 'nnu', 'Nn5g29461' => 'nnu', 'Nn7g38355' => 'nnu', 'Nn8g39873' => 'nnu', 'Oeu000548.2' => 'oeu', 'Oeu004672.1' => 'oeu', 'Oeu015605.2' => 'oeu', 'Oeu016092.1' => 'oeu', 'Oeu017879.3' => 'oeu', 'Oeu024910.1' => 'oeu', 'Oeu028965.1' => 'oeu', 'Oeu031269.1' => 'oeu', 'Oeu031270.1' => 'oeu', 'Oeu032535.1' => 'oeu', 'Oeu034151.1' => 'oeu', 'Oeu034152.1' => 'oeu', 'Oeu034588.2' => 'oeu', 'Oeu050846.1' => 'oeu', 'Oeu050849.2' => 'oeu', 'Oeu051063.2' => 'oeu', 'Oeu052368.1' => 'oeu', 'Oeu052370.1' => 'oeu', 'Os01g0210400' => 'osa', 'Os01g0304300' => 'osa', 'Os01g0749100' => 'osa', 'Os02g0745800' => 'osa', 'Os03g0769050' => 'osa', 'Os05g0531500' => 'osa', 'Os06g0724300' => 'osa', 'Os11g0198100' => 'osa', 'Peaxi162Scf00069g01425' => 'pax', 'Peaxi162Scf00280g00811' => 'pax', 'Peaxi162Scf00310g00615' => 'pax', 'Peaxi162Scf00362g00542' => 'pax', 'Peaxi162Scf00461g00310' => 'pax', 'Peaxi162Scf00530g00118' => 'pax', 'Peaxi162Scf00541g00057' => 'pax', 'Peaxi162Scf00661g00017' => 'pax', 'Peaxi162Scf00926g00027' => 'pax', 'Peaxi162Scf01064g00263' => 'pax', 'Peaxi162Scf01211g00135' => 'pax', 'PGR004G2336' => 'pgr', 'PGR042G0327' => 'pgr', 'PGR042G1957' => 'pgr', 'PGR042G2003' => 'pgr', 'PGR042G3929' => 'pgr', 'PGR083G1137' => 'pgr', 'PGR083G1364' => 'pgr', 'PGSC0003DMG400003381' => 'stu', 'PGSC0003DMG400003417' => 'stu', 'PGSC0003DMG400008981' => 'stu', 'PGSC0003DMG400012417' => 'stu', 'PGSC0003DMG400012823' => 'stu', 'PGSC0003DMG400016885' => 'stu', 'PGSC0003DMG400022812' => 'stu', 'PGSC0003DMG400029726' => 'stu', 'PGSC0003DMG401009243' => 'stu', 'PGSC0003DMG401031505' => 'stu', 'PGSC0003DMG402031505' => 'stu', 'Phvul.001G017600' => 'pvu', 'Phvul.002G193500' => 'pvu', 'Phvul.002G228900' => 'pvu', 'Phvul.002G236800' => 'pvu', 'Phvul.003G049500' => 'pvu', 'Phvul.005G072000' => 'pvu', 'Phvul.006G164800' => 'pvu', 'Phvul.006G185100' => 'pvu', 'Phvul.007G090000' => 'pvu', 'Potri.001G399800' => 'ptr', 'Potri.002G149900' => 'ptr', 'Potri.004G044100' => 'ptr', 'Potri.004G177600' => 'ptr', 'Potri.009G138000' => 'ptr', 'Potri.010G094000' => 'ptr', 'Potri.011G053000' => 'ptr', 'Potri.011G119300' => 'ptr', 'Potri.013G113700' => 'ptr', 'Potri.018G107800' => 'ptr', 'Potri.019G084100' => 'ptr', 'Pp3c14_23720' => 'ppa', 'Pp3c16_6340' => 'ppa', 'Pp3c23_13420' => 'ppa', 'Pp3c24_2740' => 'ppa', 'Pp3c25_860' => 'ppa', 'Pp3c8_21750' => 'ppa', 'Prupe.1G273000' => 'ppe', 'Prupe.1G273700' => 'ppe', 'Prupe.1G274100' => 'ppe', 'Prupe.2G023300' => 'ppe', 'Prupe.4G048000' => 'ppe', 'Prupe.4G080400' => 'ppe', 'Prupe.4G181200' => 'ppe', 'Prupe.8G056900' => 'ppe', 'Prupe.8G168700' => 'ppe', 'Psat1g189080' => 'psa', 'Psat1g204760' => 'psa', 'Psat4g175560' => 'psa', 'Psat4g177720' => 'psa', 'Psat5g244240' => 'psa', 'Psat6g010720' => 'psa', 'Psat6g187200' => 'psa', 'Psat7g072040' => 'psa', 'PSO017G3501' => 'pso', 'PSO063G2148' => 'pso', 'PSO063G5608' => 'pso', 'PSO210G6392' => 'pso', 'PSO541G2319' => 'pso', 'PSO541G2836' => 'pso', 'PSO541G4012' => 'pso', 'PSO541G6253' => 'pso', 'PSO675G0580' => 'pso', 'PSO675G0856' => 'pso', 'PSO675G5635' => 'pso', 'PSO675G9157' => 'pso', 'PSO832G1660' => 'pso', 'PSO832G1969' => 'pso', 'QL02p007186' => 'qlo', 'QL02p033904' => 'qlo', 'QL03p064391' => 'qlo', 'QL05p040593' => 'qlo', 'QL05p058242' => 'qlo', 'QL08p021825' => 'qlo', 'QL11p004981' => 'qlo', 'RcHm_v2.0_Chr1g0318301' => 'rch', 'RcHm_v2.0_Chr4g0418501' => 'rch', 'RcHm_v2.0_Chr4g0439971' => 'rch', 'RcHm_v2.0_Chr5g0008541' => 'rch', 'RcHm_v2.0_Chr5g0014101' => 'rch', 'RcHm_v2.0_Chr5g0014131' => 'rch', 'RcHm_v2.0_Chr5g0033621' => 'rch', 'RcHm_v2.0_Chr6g0272041' => 'rch', 'RcHm_v2.0_Chr6g0278831' => 'rch', 'Rhsim02G0130400' => 'rsi', 'Rhsim02G0171100' => 'rsi', 'Rhsim05G0053000' => 'rsi', 'Rhsim05G0053100' => 'rsi', 'Rhsim06G0096500' => 'rsi', 'Rhsim06G0096600' => 'rsi', 'Rhsim06G0199100' => 'rsi', 'Rhsim12G0062300' => 'rsi', 'Rhsim12G0062800' => 'rsi', 'Sabra02G0118600' => 'sbr', 'Sabra04G0027300' => 'sbr', 'Sabra04G0119500' => 'sbr', 'Sabra08G0112500' => 'sbr', 'Sabra11G0036800' => 'sbr', 'Sabra11G0103800' => 'sbr', 'Sabra13G0096300' => 'sbr', 'Sabra16G0262300' => 'sbr', 'Sabra18G0091700' => 'sbr', 'Sabra19G0095400' => 'sbr', 'SalBow6G3080' => 'sbo', 'SalBow7G1157' => 'sbo', 'SalBow7G2123' => 'sbo', 'SalBow7G2285' => 'sbo', 'SalBow7G3537' => 'sbo', 'SalBow8G2947' => 'sbo', 'SalBow8G4463' => 'sbo', 'SalBow8G5466' => 'sbo', 'Sc01g0001750' => 'sci', 'Sc02g0006640' => 'sci', 'Sc02g0006670' => 'sci', 'Sc04g0008220' => 'sci', 'Sc05g0006190' => 'sci', 'Sc08g0002760' => 'sci', 'Sc17g0006170' => 'sci', 'Sc22g0002050' => 'sci', 'Sc23g0001190' => 'sci', 'Sc24g0000980' => 'sci', 'Sed0006245' => 'sed', 'Sed0007543' => 'sed', 'Sed0009411' => 'sed', 'Sed0010765' => 'sed', 'Sed0012944' => 'sed', 'Sed0014682' => 'sed', 'Sed0016174' => 'sed', 'Sed0016796' => 'sed', 'Sed0020317' => 'sed', 'Sed0021467' => 'sed', 'SEGI_01316' => 'sgi', 'SEGI_03374' => 'sgi', 'SEGI_16265' => 'sgi', 'SEGI_18569' => 'sgi', 'SEGI_20351' => 'sgi', 'SEGI_26395' => 'sgi', 'SEGI_29469' => 'sgi', 'SEGI_34771' => 'sgi', 'SEGI_36769' => 'sgi', 'SEGI_37139' => 'sgi', 'SGA_v2.0_scaffold100G29687' => 'sas', 'SGA_v2.0_scaffold118G32472' => 'sas', 'SGA_v2.0_scaffold14G07051' => 'sas', 'SGA_v2.0_scaffold183G39845' => 'sas', 'SGA_v2.0_scaffold1G00174' => 'sas', 'SGA_v2.0_scaffold22G09714' => 'sas', 'SGA_v2.0_scaffold333G48992' => 'sas', 'SGA_v2.0_scaffold46G17491' => 'sas', 'SGA_v2.0_scaffold49G18294' => 'sas', 'SGA_v2.0_scaffold63G21658' => 'sas', 'SHI01741' => 'shi', 'SHI05771' => 'shi', 'SHI18077' => 'shi', 'SHI20525' => 'shi', 'SHI20527' => 'shi', 'SHI20528' => 'shi', 'SMO172G0185' => 'smo', 'SMO198G0020' => 'smo', 'SMO351G0006' => 'smo', 'SMO356G0118' => 'smo', 'SMO358G0296' => 'smo', 'SMO367G0079' => 'smo', 'SMO367G1277' => 'smo', 'Solyc01g014220.3' => 'sly', 'Solyc01g111770.2' => 'sly', 'Solyc02g078180.3' => 'sly', 'Solyc03g006430.3' => 'sly', 'Solyc03g006456.1' => 'sly', 'Solyc03g079860.2' => 'sly', 'Solyc04g079770.3' => 'sly', 'Solyc05g007430.4' => 'sly', 'Solyc07g063150.3' => 'sly', 'Solyc08g016620.3' => 'sly', 'Solyc09g057590.3' => 'sly', 'Solyc09g057600.1' => 'sly', 'Solyc10g009050.3' => 'sly', 'Solyc11g017420.2' => 'sly', 'Sopen01g053810' => 'spe', 'Sopen02g023040' => 'spe', 'Sopen03g002440' => 'spe', 'Sopen04g033350' => 'spe', 'Sopen05g003310' => 'spe', 'Sopen07g004050' => 'spe', 'Sopen07g031340' => 'spe', 'Sopen08g006990' => 'spe', 'Sopen10g004830' => 'spe', 'Sopen11g009370' => 'spe', 'Sp1g24450' => 'spa', 'Sp1g29670' => 'spa', 'Sp1g39600' => 'spa', 'Sp2g11080' => 'spa', 'Sp2g13970' => 'spa', 'Sp4g16130' => 'spa', 'Sp6g13080' => 'spa', 'Sp7g37270' => 'spa', 'TAR371G0065' => 'tar', 'TAR376G0340' => 'tar', 'TAR376G0435' => 'tar', 'TAR381G0002' => 'tar', 'TAR381G1236' => 'tar', 'TAR624G0055' => 'tar', 'TAR624G0324' => 'tar', 'TAR624G0696' => 'tar', 'TAR624G0906' => 'tar', 'TAR625G0107' => 'tar', 'TAR626G0015' => 'tar', 'TAR626G1356' => 'tar', 'TAR627G0888' => 'tar', 'TAR628G0399' => 'tar', 'TAR628G1327' => 'tar', 'TAR629G2831' => 'tar', 'TAR629G2874' => 'tar', 'TAR633G1432' => 'tar', 'TAR633G2771' => 'tar', 'THA.LOC104803394' => 'tha', 'THA.LOC104805153' => 'tha', 'THA.LOC104806784' => 'tha', 'THA.LOC104810473' => 'tha', 'THA.LOC104813100' => 'tha', 'THA.LOC104814215' => 'tha', 'THA.LOC104815554' => 'tha', 'THA.LOC104820544' => 'tha', 'THA.LOC104824754' => 'tha', 'THA.LOC104827717' => 'tha', 'Thecc.02G031400' => 'tca', 'Thecc.02G055900' => 'tca', 'Thecc.02G350800' => 'tca', 'Thecc.06G150900' => 'tca', 'Thecc.06G186600' => 'tca', 'Thecc.07G089600' => 'tca', 'Thecc.08G020400' => 'tca', 'Thecc.08G182100' => 'tca', 'Thhalv10000873m.g' => 'esa', 'Thhalv10004185m.g' => 'esa', 'Thhalv10006981m.g' => 'esa', 'Thhalv10007204m.g' => 'esa', 'Thhalv10011374m.g' => 'esa', 'Thhalv10013482m.g' => 'esa', 'Thhalv10017801m.g' => 'esa', 'Thhalv10024983m.g' => 'esa', 'TPR.G12072' => 'tpr', 'TPR.G15769' => 'tpr', 'TPR.G16504' => 'tpr', 'TPR.G16506' => 'tpr', 'TPR.G24345' => 'tpr', 'TPR.G26666' => 'tpr', 'TPR.G27320' => 'tpr', 'TPR.G31819' => 'tpr', 'TPR.G38879' => 'tpr', 'TPR.G39015' => 'tpr', 'TPR.G8819' => 'tpr', 'TWI09G0924' => 'twi', 'TWI12G0811' => 'twi', 'TWI12G1294' => 'twi', 'TWI31G0150' => 'twi', 'TWI36G1262' => 'twi', 'TWI38G1287' => 'twi', 'TWI38G1633' => 'twi', 'TWI38G1982' => 'twi', 'TWI39G0116' => 'twi', 'TWI60G1011' => 'twi', 'TWI63G0171' => 'twi', 'TWI73G0839' => 'twi', 'TWI79G1511' => 'twi', 'unitig_0.g915' => 'ugi', 'unitig_0.g916' => 'ugi', 'unitig_21.g20219' => 'ugi', 'unitig_21.g20416' => 'ugi', 'unitig_578.g16132' => 'ugi', 'unitig_578.g16718' => 'ugi', 'unitig_62.g23481' => 'ugi', 'unitig_744.g24535' => 'ugi', 'unitig_749.g13525' => 'ugi', 'vmacro01248' => 'vma', 'vmacro02290' => 'vma', 'vmacro10946' => 'vma', 'vmacro11865' => 'vma', 'vmacro12493' => 'vma', 'vmacro17322' => 'vma', 'vmacro21599' => 'vma', 'vmacro23041' => 'vma', 'VMungo0251G0004' => 'vmu', 'VMungo0251G2639' => 'vmu', 'VMungo0251G2967' => 'vmu', 'VMungo0540G0864' => 'vmu', 'VMungo0540G1569' => 'vmu', 'VMungo0647G0317' => 'vmu', 'VMungo0720G1373' => 'vmu', 'VMungo0720G1508' => 'vmu', 'VMungo1080G0485' => 'vmu', 'VMungo1215G3177' => 'vmu', 'Zm00001eb112600' => 'zma', 'Zm00001eb120220' => 'zma', 'Zm00001eb153240' => 'zma', 'Zm00001eb168880' => 'zma', 'Zm00001eb213920' => 'zma', 'Zm00001eb228280' => 'zma', 'Zm00001eb254580' => 'zma', 'Zm00001eb272180' => 'zma', 'Zm00001eb293190' => 'zma', 'Zm00001eb322930' => 'zma', 'Zm00001eb353360' => 'zma', 'Zm00001eb353390' => 'zma', 'Zm00001eb353430' => 'zma', 'Zm00001eb353440' => 'zma', 'Zm00001eb353780' => 'zma' ), 'gf_id' => 'HOM05D000499', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000499' ), 'data_identifier' => 'HOM05D000499', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000499', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1066', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p29780' => 'bna', 'A02p33180' => 'bna', 'A03p16470' => 'bna', 'A03p66010' => 'bna', 'A04p25970' => 'bna', 'A06p01270' => 'bna', 'A06p46080' => 'bna', 'A07p11400' => 'bna', 'A08p01840' => 'bna', 'A08p08230' => 'bna', 'A08p25740' => 'bna', 'A09p32070' => 'bna', 'A09p37830' => 'bna', 'A09p42840' => 'bna', 'A09p42850' => 'bna', 'Aa31LG10G2060' => 'aar', 'Aa31LG2G7410' => 'aar', 'Aa31LG6G10200' => 'aar', 'Aa31LG6G16680' => 'aar', 'Aa31LG6G8470' => 'aar', 'Aa31LG9G12730' => 'aar', 'Aa31LG9G13680' => 'aar', 'Aa31LG9G14920' => 'aar', 'Aa31LG9G6650' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4977' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5467' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3254' => 'aag', 'Actinidia02578' => 'ach', 'Actinidia07693' => 'ach', 'Actinidia08413' => 'ach', 'Actinidia08414' => 'ach', 'Actinidia15289' => 'ach', 'Actinidia19871' => 'ach', 'Actinidia21475' => 'ach', 'Actinidia22576' => 'ach', 'Actinidia28327' => 'ach', 'Actinidia32491' => 'ach', 'Actinidia39463' => 'ach', 'Actinidia39571' => 'ach', 'Ah.01g013750' => 'amhyb', 'Ah.01g023210' => 'amhyb', 'Ah.04g164850' => 'amhyb', 'Ah.05g178060' => 'amhyb', 'Ah.07g204270' => 'amhyb', 'Ah.07g208480' => 'amhyb', 'Ah.09g237410' => 'amhyb', 'Ah.14g089460' => 'amhyb', 'AL1G41790' => 'aly', 'AL1G49050' => 'aly', 'AL1G53810' => 'aly', 'AL1G61400' => 'aly', 'AL4G18580' => 'aly', 'AL5G12510' => 'aly', 'AL5G12540' => 'aly', 'AL6G43230' => 'aly', 'AL7G10370' => 'aly', 'AL7G19250' => 'aly', 'AL8G12240' => 'aly', 'AL8G18540' => 'aly', 'Aqoxy1G02409' => 'aox', 'Aqoxy2G03993' => 'aox', 'Aqoxy3G03357' => 'aox', 'Aqoxy4G00785' => 'aox', 'Aqoxy5G02598' => 'aox', 'Aqoxy6G00132' => 'aox', 'Aqoxy7G01776' => 'aox', 'Aqoxy7G02316' => 'aox', 'Aqoxy7G03973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.12AFKW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B8730' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27IQR1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3F75VG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3RE0GA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41TCQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.527VTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FIR39' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5W8UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DA38EV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ63HS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H1I32C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HC27T5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4M8AP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7N3CZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9UVDZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LS1NQA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT1D4B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SKC4TM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCFV76' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF9Q1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQWD9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1ZM88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WE07RT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YCK7VH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJE6Q6' => 'arhy', 'AT1G28240' => 'ath', 'AT1G34550' => 'ath', 'AT1G53040' => 'ath', 'AT2G02910' => 'ath', 'AT4G09630' => 'ath', 'AT4G38500' => 'ath', 'AT5G42660' => 'ath', 'AT5G46220' => 'ath', 'ATR0152G026' => 'atr', 'ATR0564G343' => 'atr', 'ATR0706G151' => 'atr', 'ATR0733G207' => 'atr', 'ATR0751G234' => 'atr', 'ATR0807G048' => 'atr', 'ATR1091G084' => 'atr', 'Atru.chr10.1229' => 'acertr', 'Atru.chr10.1230' => 'acertr', 'Atru.chr10.1874' => 'acertr', 'Atru.chr11.1808' => 'acertr', 'Atru.chr13.1795' => 'acertr', 'Atru.chr13.570' => 'acertr', 'Atru.chr2.2608' => 'acertr', 'Atru.chr2.2609' => 'acertr', 'Atru.chr5.3428' => 'acertr', 'Atru.chr8.1171' => 'acertr', 'AUR62004651' => 'cqu', 'AUR62008675' => 'cqu', 'AUR62010014' => 'cqu', 'AUR62013004' => 'cqu', 'AUR62014825' => 'cqu', 'AUR62015015' => 'cqu', 'AUR62015151' => 'cqu', 'AUR62017020' => 'cqu', 'AUR62019422' => 'cqu', 'AUR62023570' => 'cqu', 'AUR62025571' => 'cqu', 'AUR62029098' => 'cqu', 'AUR62033863' => 'cqu', 'AUR62034296' => 'cqu', 'AUR62040075' => 'cqu', 'BcaB02g07334' => 'bca', 'BcaB02g10575' => 'bca', 'BcaB03g12119' => 'bca', 'BcaB03g12120' => 'bca', 'BcaB03g13945' => 'bca', 'BcaB04g17123' => 'bca', 'BcaB04g17867' => 'bca', 'BcaB04g19839' => 'bca', 'BcaB07g30317' => 'bca', 'BcaB07g32432' => 'bca', 'BcaB07g33362' => 'bca', 'BcaB08g36611' => 'bca', 'BcaC01g00028' => 'bca', 'BcaC01g01356' => 'bca', 'BcaC01g02034' => 'bca', 'BcaC01g06051' => 'bca', 'BcaC03g16839' => 'bca', 'BcaC03g17176' => 'bca', 'BcaC05g26829' => 'bca', 'BcaC06g31490' => 'bca', 'BcaC06g35344' => 'bca', 'BcaC06g36570' => 'bca', 'BcaC07g37537' => 'bca', 'BcaC08g43491' => 'bca', 'BcaC08g43773' => 'bca', 'BcaNung00234' => 'bca', 'BcaNung01982' => 'bca', 'BcaNung03707' => 'bca', 'BcaNung06454' => 'bca', 'BolC2t10762H' => 'bol', 'BolC2t11191H' => 'bol', 'BolC3t14322H' => 'bol', 'BolC3t19747H' => 'bol', 'BolC3t21425H' => 'bol', 'BolC4t27800H' => 'bol', 'BolC5t31423H' => 'bol', 'BolC6t35951H' => 'bol', 'BolC6t36282H' => 'bol', 'BolC7t40678H' => 'bol', 'BolC7t40679H' => 'bol', 'BolC7t42222H' => 'bol', 'BolC7t43492H' => 'bol', 'BolC7t46785H' => 'bol', 'BolC8t47853H' => 'bol', 'BolC9t56805H' => 'bol', 'BraA02t08000Z' => 'bra', 'BraA02t08341Z' => 'bra', 'BraA03t10936Z' => 'bra', 'BraA03t15657Z' => 'bra', 'BraA04t18100Z' => 'bra', 'BraA05t20523Z' => 'bra', 'BraA06t23353Z' => 'bra', 'BraA06t27473Z' => 'bra', 'BraA06t27769Z' => 'bra', 'BraA07t28928Z' => 'bra', 'BraA08t32236Z' => 'bra', 'BraA08t32841Z' => 'bra', 'BraA08t34524Z' => 'bra', 'BraA09t38742Z' => 'bra', 'BraA09t39295Z' => 'bra', 'C02p47180' => 'bna', 'C02p50990' => 'bna', 'C03p19360' => 'bna', 'C03p74950' => 'bna', 'C03p91000' => 'bna', 'C04p63260' => 'bna', 'C05p27050' => 'bna', 'C06p08750' => 'bna', 'C06p11490' => 'bna', 'C07p02820' => 'bna', 'C07p17180' => 'bna', 'C07p29440' => 'bna', 'C07p63730' => 'bna', 'C09p39260' => 'bna', 'CAN.G1164.34' => 'can', 'CAN.G1164.39' => 'can', 'CAN.G1530.3' => 'can', 'CAN.G162.61' => 'can', 'CAN.G176.6' => 'can', 'CAN.G289.49' => 'can', 'CAN.G370.21' => 'can', 'CAN.G370.22' => 'can', 'CAN.G371.117' => 'can', 'CAN.G58.37' => 'can', 'CAN.G588.98' => 'can', 'CANSAT21G2266' => 'cansat', 'CANSAT25G2799' => 'cansat', 'CANSAT35G0862' => 'cansat', 'CANSAT35G1704' => 'cansat', 'CANSAT35G1760' => 'cansat', 'CANSAT56G3971' => 'cansat', 'CANSAT56G4116' => 'cansat', 'CANSAT80G1259' => 'cansat', 'CARHR027730' => 'chi', 'CARHR033880' => 'chi', 'CARHR043270' => 'chi', 'CARHR145330' => 'chi', 'CARHR145340' => 'chi', 'CARHR175570' => 'chi', 'CARHR181570' => 'chi', 'CARHR258470' => 'chi', 'CARHR260490' => 'chi', 'CARHR294220' => 'chi', 'Carub.0001s2668' => 'cru', 'Carub.0001s3257' => 'cru', 'Carub.0001s4220' => 'cru', 'Carub.0005s0179' => 'cru', 'Carub.0006s2807' => 'cru', 'Carub.0007s0039' => 'cru', 'Carub.0008s0169' => 'cru', 'Carub.0008s0636' => 'cru', 'Ca_00338_v3' => 'car', 'Ca_00542_v3' => 'car', 'Ca_01844_v3' => 'car', 'Ca_10611_v3' => 'car', 'Ca_13326_v3' => 'car', 'Ca_17944_v3' => 'car', 'Ca_18546_v3' => 'car', 'Ca_24219_v3' => 'car', 'Ca_29972_v3' => 'car', 'CBR_g3681' => 'cbr', 'CBR_g40021' => 'cbr', 'Cc01_g08140' => 'ccan', 'Cc02_g13410' => 'ccan', 'Cc02_g37480' => 'ccan', 'Cc05_g12030' => 'ccan', 'Cc09_g03370' => 'ccan', 'Cc09_g10300' => 'ccan', 'Cc10_g03530' => 'ccan', 'Cc10_g11380' => 'ccan', 'CDE01G0176' => 'cde', 'CDE02G0675' => 'cde', 'CDE02G0942' => 'cde', 'CDE02G1153' => 'cde', 'CDE02G4177' => 'cde', 'CDE04G2117' => 'cde', 'CDE04G2736' => 'cde', 'CDE08G1161' => 'cde', 'CDE09G1238' => 'cde', 'Cfa000467' => 'cfa', 'Cfa000947' => 'cfa', 'Cfa004969' => 'cfa', 'Cfa005284' => 'cfa', 'Cfa008993' => 'cfa', 'Cfa018187' => 'cfa', 'Cfa018454' => 'cfa', 'Cfa020585' => 'cfa', 'Ciclev10000424m.g' => 'ccl', 'Ciclev10003605m.g' => 'ccl', 'Ciclev10007828m.g' => 'ccl', 'Ciclev10014620m.g' => 'ccl', 'Ciclev10015169m.g' => 'ccl', 'Ciclev10018291m.g' => 'ccl', 'Ciclev10028256m.g' => 'ccl', 'Ciclev10033822m.g' => 'ccl', 'CiPaw.05G060300' => 'cil', 'CiPaw.05G085000' => 'cil', 'CiPaw.06G083700' => 'cil', 'CiPaw.06G120300' => 'cil', 'CiPaw.09G060500' => 'cil', 'CiPaw.09G123800' => 'cil', 'CiPaw.11G169700' => 'cil', 'CiPaw.12G118300' => 'cil', 'CiPaw.15G071000' => 'cil', 'CiPaw.15G081900' => 'cil', 'ClCG01G024610' => 'cla', 'ClCG03G006070' => 'cla', 'ClCG05G019250' => 'cla', 'ClCG09G009500' => 'cla', 'ClCG11G008200' => 'cla', 'ClCG11G018080' => 'cla', 'COL.COLO4_17373' => 'col', 'COL.COLO4_22994' => 'col', 'COL.COLO4_26389' => 'col', 'COL.COLO4_27170' => 'col', 'COL.COLO4_31074' => 'col', 'COL.COLO4_31465' => 'col', 'COL.COLO4_36438' => 'col', 'COL.COLO4_36439' => 'col', 'Cpa.g.c38781' => 'cpa', 'Cpa.g.sc128.12' => 'cpa', 'Cpa.g.sc166.7' => 'cpa', 'Cpa.g.sc166.8' => 'cpa', 'Cpa.g.sc20.111' => 'cpa', 'Cpa.g.sc27.31' => 'cpa', 'Cpa.g.sc64.36' => 'cpa', 'Cpa.g.sc64.37' => 'cpa', 'Cpa.g.sc66.49' => 'cpa', 'Cpa.g.sc80.64' => 'cpa', 'CsaV3_1G012320' => 'csa', 'CsaV3_2G008480' => 'csa', 'CsaV3_2G033450' => 'csa', 'CsaV3_3G044830' => 'csa', 'CsaV3_4G033710' => 'csa', 'CsaV3_6G051730' => 'csa', 'CsaV3_7G025350' => 'csa', 'CSS0001067' => 'camsi', 'CSS0005996' => 'camsi', 'CSS0006590' => 'camsi', 'CSS0009673' => 'camsi', 'CSS0010201' => 'camsi', 'CSS0010549' => 'camsi', 'CSS0011364' => 'camsi', 'CSS0014473' => 'camsi', 'CSS0014961' => 'camsi', 'CSS0020191' => 'camsi', 'CSS0021165' => 'camsi', 'CSS0022306' => 'camsi', 'CSS0030591' => 'camsi', 'CSS0030696' => 'camsi', 'CSS0032653' => 'camsi', 'CSS0037487' => 'camsi', 'CSS0041102' => 'camsi', 'CSS0041261' => 'camsi', 'CSS0046246' => 'camsi', 'CSS0049256' => 'camsi', 'DCAR_004075' => 'dca', 'DCAR_011538' => 'dca', 'DCAR_019553' => 'dca', 'DCAR_020952' => 'dca', 'DCAR_021739' => 'dca', 'DCAR_027407' => 'dca', 'DCAR_027913' => 'dca', 'DCAR_028066' => 'dca', 'Dinv05899' => 'din', 'Dinv07563' => 'din', 'Dinv08010' => 'din', 'Dinv14125' => 'din', 'Dinv20172' => 'din', 'Dinv30743' => 'din', 'Dinv31229' => 'din', 'Dinv34162' => 'din', 'Dinv36028' => 'din', 'Dinv39368' => 'din', 'Dinv40565' => 'din', 'Dinv41706' => 'din', 'Duzib052G0089' => 'dzi', 'Duzib116G0641' => 'dzi', 'Duzib132G0069' => 'dzi', 'Duzib132G1219' => 'dzi', 'Duzib147G0278' => 'dzi', 'Duzib160G0480' => 'dzi', 'Duzib170G0661' => 'dzi', 'Duzib177G0591' => 'dzi', 'Duzib187G1353' => 'dzi', 'Duzib192G0858' => 'dzi', 'Duzib192G0883' => 'dzi', 'Duzib213G0506' => 'dzi', 'Duzib235G0289' => 'dzi', 'Duzib251G0422' => 'dzi', 'ECA232G3898' => 'eca', 'ECA233G5950' => 'eca', 'ECA234G1699' => 'eca', 'ECA234G2421' => 'eca', 'ECA236G0426' => 'eca', 'ECA236G4331' => 'eca', 'ECA248G2573' => 'eca', 'EL10Ac1g00077' => 'bvu', 'EL10Ac1g01746' => 'bvu', 'EL10Ac2g03464' => 'bvu', 'EL10Ac4g08176' => 'bvu', 'EL10Ac7g17521' => 'bvu', 'EL10Ac8g20386' => 'bvu', 'EL10Ac9g21343' => 'bvu', 'EL10Ac9g22688' => 'bvu', 'Eucgr.B03434' => 'egr', 'Eucgr.D00618' => 'egr', 'Eucgr.E02395' => 'egr', 'Eucgr.F01129' => 'egr', 'Eucgr.F02622' => 'egr', 'Eucgr.F04207' => 'egr', 'FAN01G0570' => 'fan', 'FAN03G3351' => 'fan', 'FAN06G3702' => 'fan', 'FAN07G2149' => 'fan', 'FAN10G3758' => 'fan', 'FAN11G1170' => 'fan', 'FAN11G2050' => 'fan', 'FAN11G2724' => 'fan', 'FAN12G1700' => 'fan', 'FAN12G2028' => 'fan', 'FAN15G1160' => 'fan', 'FAN15G3063' => 'fan', 'FAN16G2540' => 'fan', 'FAN16G3077' => 'fan', 'FAN16G3624' => 'fan', 'FAN17G0221' => 'fan', 'FAN20G2492' => 'fan', 'FAN20G2905' => 'fan', 'FAN21G0548' => 'fan', 'FAN21G1300' => 'fan', 'FAN22G0077' => 'fan', 'FAN22G1315' => 'fan', 'FAN24G1280' => 'fan', 'FAN24G1445' => 'fan', 'FAN24G3527' => 'fan', 'FAN25G0464' => 'fan', 'FAN25G2885' => 'fan', 'FAN25G3270' => 'fan', 'FAN27G1101' => 'fan', 'FAN27G2846' => 'fan', 'FAN27G3524' => 'fan', 'FvH4_2g11770' => 'fve', 'FvH4_2g15630' => 'fve', 'FvH4_3g05570' => 'fve', 'FvH4_3g09110' => 'fve', 'FvH4_3g19940' => 'fve', 'FvH4_4g04821' => 'fve', 'FvH4_4g31480' => 'fve', 'FvH4_7g01740' => 'fve', 'Glyma.05G130400' => 'gma', 'Glyma.05G156400' => 'gma', 'Glyma.07G197000' => 'gma', 'Glyma.08G085151' => 'gma', 'Glyma.08G114500' => 'gma', 'Glyma.08G300400' => 'gma', 'Glyma.10G215800' => 'gma', 'Glyma.12G224400' => 'gma', 'Glyma.13G179300' => 'gma', 'Glyma.13G218151' => 'gma', 'Glyma.13G238800' => 'gma', 'Glyma.13G276900' => 'gma', 'Glyma.14G078200' => 'gma', 'Glyma.15G074500' => 'gma', 'Glyma.15G094100' => 'gma', 'Glyma.17G247200' => 'gma', 'Glyma.18G120100' => 'gma', 'Glyma.20G176000' => 'gma', 'Gohir.A01G063600' => 'ghi', 'Gohir.A01G170301' => 'ghi', 'Gohir.A02G060500' => 'ghi', 'Gohir.A05G133850' => 'ghi', 'Gohir.A05G161400' => 'ghi', 'Gohir.A06G012900' => 'ghi', 'Gohir.A06G035901' => 'ghi', 'Gohir.A06G127100' => 'ghi', 'Gohir.A06G210500' => 'ghi', 'Gohir.A08G008650' => 'ghi', 'Gohir.A09G072700' => 'ghi', 'Gohir.A09G088301' => 'ghi', 'Gohir.A10G040600' => 'ghi', 'Gohir.A12G036300' => 'ghi', 'Gohir.A12G143350' => 'ghi', 'Gohir.A12G165500' => 'ghi', 'Gohir.A13G145700' => 'ghi', 'Gohir.D01G050000' => 'ghi', 'Gohir.D01G051366' => 'ghi', 'Gohir.D01G161350' => 'ghi', 'Gohir.D02G065900' => 'ghi', 'Gohir.D05G164200' => 'ghi', 'Gohir.D05G355500' => 'ghi', 'Gohir.D06G010400' => 'ghi', 'Gohir.D06G111250' => 'ghi', 'Gohir.D06G132000' => 'ghi', 'Gohir.D06G210500' => 'ghi', 'Gohir.D07G165675' => 'ghi', 'Gohir.D08G062240' => 'ghi', 'Gohir.D08G086101' => 'ghi', 'Gohir.D08G138060' => 'ghi', 'Gohir.D09G072300' => 'ghi', 'Gohir.D10G041400' => 'ghi', 'Gohir.D11G191020' => 'ghi', 'Gohir.D11G212066' => 'ghi', 'Gohir.D12G036300' => 'ghi', 'Gohir.D12G168600' => 'ghi', 'Gohir.D13G150600' => 'ghi', 'Gorai.001G057300' => 'gra', 'Gorai.002G069900' => 'gra', 'Gorai.002G200000' => 'gra', 'Gorai.003G067600' => 'gra', 'Gorai.005G074800' => 'gra', 'Gorai.006G087300' => 'gra', 'Gorai.008G037500' => 'gra', 'Gorai.008G181400' => 'gra', 'Gorai.009G169400' => 'gra', 'Gorai.009G387900' => 'gra', 'Gorai.010G013300' => 'gra', 'Gorai.010G153800' => 'gra', 'Gorai.010G255800' => 'gra', 'Gorai.011G043700' => 'gra', 'Gorai.011G198900' => 'gra', 'Gorai.013G168400' => 'gra', 'GSVIVG01005212001' => 'vvi', 'GSVIVG01006163001' => 'vvi', 'GSVIVG01009625001' => 'vvi', 'GSVIVG01014338001' => 'vvi', 'GSVIVG01020005001' => 'vvi', 'GSVIVG01021450001' => 'vvi', 'GSVIVG01023975001' => 'vvi', 'GSVIVG01034490001' => 'vvi', 'HanXRQChr04g0112071' => 'han', 'HanXRQChr05g0131151' => 'han', 'HanXRQChr09g0262371' => 'han', 'HanXRQChr09g0268401' => 'han', 'HanXRQChr10g0279241' => 'han', 'HanXRQChr10g0297961' => 'han', 'HanXRQChr11g0326231' => 'han', 'HanXRQChr11g0328471' => 'han', 'HanXRQChr16g0507941' => 'han', 'HanXRQChr17g0560211' => 'han', 'Haze_02108' => 'cav', 'Haze_02428' => 'cav', 'Haze_05593' => 'cav', 'Haze_06448' => 'cav', 'Haze_09427' => 'cav', 'Haze_12022' => 'cav', 'Haze_17612' => 'cav', 'Haze_17928' => 'cav', 'Hma1.2p1_0032F.1_g019250' => 'hma', 'Hma1.2p1_0163F.1_g072690' => 'hma', 'Hma1.2p1_0265F.1_g106710' => 'hma', 'Hma1.2p1_0286F.1_g113970' => 'hma', 'Hma1.2p1_0363F.1_g136640' => 'hma', 'Hma1.2p1_0584F.1_g183470' => 'hma', 'Hma1.2p1_0885F.1_g232570' => 'hma', 'HPP92_006022' => 'vpl', 'HPP92_007320' => 'vpl', 'HPP92_011521' => 'vpl', 'HPP92_019387' => 'vpl', 'HPP92_024038' => 'vpl', 'Hund05891' => 'sun', 'Hund06450' => 'sun', 'Hund12053' => 'sun', 'Hund16800' => 'sun', 'Hund21222' => 'sun', 'Hund22896' => 'sun', 'Hund23746' => 'sun', 'Hund27083' => 'sun', 'Lalb_Chr02g0141831' => 'lal', 'Lalb_Chr02g0141841' => 'lal', 'Lalb_Chr05g0220411' => 'lal', 'Lalb_Chr06g0162081' => 'lal', 'Lalb_Chr09g0327651' => 'lal', 'Lalb_Chr13g0295051' => 'lal', 'Lalb_Chr15g0086801' => 'lal', 'Lalb_Chr16g0383781' => 'lal', 'Lalb_Chr16g0383791' => 'lal', 'Lalb_Chr18g0055441' => 'lal', 'Lalb_Chr18g0059611' => 'lal', 'Lalb_Chr20g0109661' => 'lal', 'Lalb_Chr20g0109831' => 'lal', 'Lalb_Chr20g0121871' => 'lal', 'Lalb_Chr22g0355361' => 'lal', 'Lalb_Chr25g0286371' => 'lal', 'Lj1A1187G43' => 'lonja', 'Lj1A1205T50' => 'lonja', 'Lj1A800G33' => 'lonja', 'Lj1C1187T7' => 'lonja', 'Lj1C843T11' => 'lonja', 'Lj1g0010940' => 'lja', 'Lj2A288T69' => 'lonja', 'Lj3g0024276' => 'lja', 'Lj4A47T76' => 'lonja', 'Lj4g0005805' => 'lja', 'Lj4g0006097' => 'lja', 'Lj4g0008528' => 'lja', 'Lj4g0024907' => 'lja', 'Lj5g0012472' => 'lja', 'Lj5g0018648' => 'lja', 'Lj6C789G1' => 'lonja', 'Lj6g0004000' => 'lja', 'Lj7A292G67' => 'lonja', 'Lj7A292T64' => 'lonja', 'Lj9A400T58' => 'lonja', 'Lsat_1_v5_gn_1_126181' => 'lsa', 'Lsat_1_v5_gn_4_123041' => 'lsa', 'Lsat_1_v5_gn_4_133620' => 'lsa', 'Lsat_1_v5_gn_4_53221' => 'lsa', 'Lsat_1_v5_gn_4_71961' => 'lsa', 'Lsat_1_v5_gn_7_105241' => 'lsa', 'Lsat_1_v5_gn_7_21361' => 'lsa', 'Lsat_1_v5_gn_7_28860' => 'lsa', 'Lsat_1_v5_gn_7_31260' => 'lsa', 'Lsat_1_v5_gn_8_52801' => 'lsa', 'Manes.02G191400' => 'mes', 'Manes.03G110100' => 'mes', 'Manes.04G071100' => 'mes', 'Manes.05G100500' => 'mes', 'Manes.05G164700' => 'mes', 'Manes.15G087000' => 'mes', 'Manes.15G121500' => 'mes', 'Manes.16G028300' => 'mes', 'Manes.17G046100' => 'mes', 'Manes.17G069800' => 'mes', 'Manes.18G100500' => 'mes', 'Mapoly0002s0109' => 'mpo', 'Mapoly0024s0007' => 'mpo', 'Mapoly0089s0032' => 'mpo', 'MBI04_g42241_MAGBIO' => 'mbi', 'MBI05_g11988_MAGBIO' => 'mbi', 'MBI05_g35452_MAGBIO' => 'mbi', 'MBI07_g30179_MAGBIO' => 'mbi', 'MBI07_g35859_MAGBIO' => 'mbi', 'MBI07_g35860_MAGBIO' => 'mbi', 'MBI07_g37166_MAGBIO' => 'mbi', 'MBI08_g18172_MAGBIO' => 'mbi', 'MBI09_g08441_MAGBIO' => 'mbi', 'MBI13_g01676_MAGBIO' => 'mbi', 'MBI14_g42955_MAGBIO' => 'mbi', 'MBI16_g13161_MAGBIO' => 'mbi', 'MBI17_g27204_MAGBIO' => 'mbi', 'MBI19_g21595_MAGBIO' => 'mbi', 'MD00G1148400' => 'mdo', 'MD02G1301200' => 'mdo', 'MD03G1227800' => 'mdo', 'MD05G1041100' => 'mdo', 'MD05G1124800' => 'mdo', 'MD05G1284000' => 'mdo', 'MD05G1338800' => 'mdo', 'MD05G1338900' => 'mdo', 'MD07G1022800' => 'mdo', 'MD10G1047500' => 'mdo', 'MD10G1127500' => 'mdo', 'MD10G1262300' => 'mdo', 'MD10G1293800' => 'mdo', 'MD16G1074300' => 'mdo', 'Medtr1g021670' => 'mtr', 'Medtr1g096320' => 'mtr', 'Medtr2g013690' => 'mtr', 'Medtr2g019450' => 'mtr', 'Medtr2g085170' => 'mtr', 'Medtr4g088785' => 'mtr', 'Medtr8g055930' => 'mtr', 'Medtr8g085850' => 'mtr', 'MELO3C002605.2' => 'cme', 'MELO3C003891.2' => 'cme', 'MELO3C004012.2' => 'cme', 'MELO3C007134.2' => 'cme', 'MELO3C008118.2' => 'cme', 'MELO3C016700.2' => 'cme', 'MELO3C024127.2' => 'cme', 'MELO3C033361.2' => 'cme', 'MELO3C033362.2' => 'cme', 'Migut.C00430' => 'egut', 'Migut.C01246' => 'egut', 'Migut.E00101' => 'egut', 'Migut.H01486' => 'egut', 'Migut.H01939' => 'egut', 'Migut.K00360' => 'egut', 'Migut.M00910' => 'egut', 'Migut.M01139' => 'egut', 'Migut.N02677' => 'egut', 'MSTRG.13252' => 'ama', 'MSTRG.14701' => 'ama', 'MSTRG.1521' => 'ama', 'MSTRG.15884' => 'ama', 'MSTRG.16242' => 'ama', 'MSTRG.22285' => 'ama', 'MSTRG.22444' => 'ama', 'MSTRG.2349' => 'ama', 'MSTRG.26308' => 'ama', 'MSTRG.28296' => 'ama', 'MSTRG.9895' => 'ama', 'Nitab4.5_0000110g0060' => 'nta', 'Nitab4.5_0000420g0130' => 'nta', 'Nitab4.5_0000422g0030' => 'nta', 'Nitab4.5_0000560g0180' => 'nta', 'Nitab4.5_0000703g0100' => 'nta', 'Nitab4.5_0000786g0200' => 'nta', 'Nitab4.5_0001336g0020' => 'nta', 'Nitab4.5_0001796g0030' => 'nta', 'Nitab4.5_0003348g0060' => 'nta', 'Nitab4.5_0003698g0040' => 'nta', 'Nitab4.5_0003942g0090' => 'nta', 'Nitab4.5_0004775g0070' => 'nta', 'Nitab4.5_0004864g0030' => 'nta', 'Nitab4.5_0005615g0020' => 'nta', 'Nitab4.5_0009288g0030' => 'nta', 'Nitab4.5_0009341g0010' => 'nta', 'Nitab4.5_0009535g0010' => 'nta', 'Nn1g03995' => 'nnu', 'Nn1g04100' => 'nnu', 'Nn1g06530' => 'nnu', 'Nn3g16404' => 'nnu', 'Nn3g17212' => 'nnu', 'Nn3g20776' => 'nnu', 'Nn3g21923' => 'nnu', 'Nn5g27737' => 'nnu', 'Nn5g29461' => 'nnu', 'Nn7g38355' => 'nnu', 'Nn8g39873' => 'nnu', 'Oeu000548.2' => 'oeu', 'Oeu004672.1' => 'oeu', 'Oeu015605.2' => 'oeu', 'Oeu016092.1' => 'oeu', 'Oeu017879.3' => 'oeu', 'Oeu024910.1' => 'oeu', 'Oeu028965.1' => 'oeu', 'Oeu031269.1' => 'oeu', 'Oeu031270.1' => 'oeu', 'Oeu032535.1' => 'oeu', 'Oeu034151.1' => 'oeu', 'Oeu034152.1' => 'oeu', 'Oeu034588.2' => 'oeu', 'Oeu050846.1' => 'oeu', 'Oeu050849.2' => 'oeu', 'Oeu051063.2' => 'oeu', 'Oeu052368.1' => 'oeu', 'Oeu052370.1' => 'oeu', 'Os01g0210400' => 'osa', 'Os01g0304300' => 'osa', 'Os01g0749100' => 'osa', 'Os02g0745800' => 'osa', 'Os03g0769050' => 'osa', 'Os05g0531500' => 'osa', 'Os06g0724300' => 'osa', 'Os11g0198100' => 'osa', 'Peaxi162Scf00069g01425' => 'pax', 'Peaxi162Scf00280g00811' => 'pax', 'Peaxi162Scf00310g00615' => 'pax', 'Peaxi162Scf00362g00542' => 'pax', 'Peaxi162Scf00461g00310' => 'pax', 'Peaxi162Scf00530g00118' => 'pax', 'Peaxi162Scf00541g00057' => 'pax', 'Peaxi162Scf00661g00017' => 'pax', 'Peaxi162Scf00926g00027' => 'pax', 'Peaxi162Scf01064g00263' => 'pax', 'Peaxi162Scf01211g00135' => 'pax', 'PGR004G2336' => 'pgr', 'PGR042G0327' => 'pgr', 'PGR042G1957' => 'pgr', 'PGR042G2003' => 'pgr', 'PGR042G3929' => 'pgr', 'PGR083G1137' => 'pgr', 'PGR083G1364' => 'pgr', 'PGSC0003DMG400003381' => 'stu', 'PGSC0003DMG400003417' => 'stu', 'PGSC0003DMG400008981' => 'stu', 'PGSC0003DMG400012417' => 'stu', 'PGSC0003DMG400012823' => 'stu', 'PGSC0003DMG400016885' => 'stu', 'PGSC0003DMG400022812' => 'stu', 'PGSC0003DMG400029726' => 'stu', 'PGSC0003DMG401009243' => 'stu', 'PGSC0003DMG401031505' => 'stu', 'PGSC0003DMG402031505' => 'stu', 'Phvul.001G017600' => 'pvu', 'Phvul.002G193500' => 'pvu', 'Phvul.002G228900' => 'pvu', 'Phvul.002G236800' => 'pvu', 'Phvul.003G049500' => 'pvu', 'Phvul.005G072000' => 'pvu', 'Phvul.006G164800' => 'pvu', 'Phvul.006G185100' => 'pvu', 'Phvul.007G090000' => 'pvu', 'Potri.001G399800' => 'ptr', 'Potri.002G149900' => 'ptr', 'Potri.004G044100' => 'ptr', 'Potri.004G177600' => 'ptr', 'Potri.009G138000' => 'ptr', 'Potri.010G094000' => 'ptr', 'Potri.011G053000' => 'ptr', 'Potri.011G119300' => 'ptr', 'Potri.013G113700' => 'ptr', 'Potri.018G107800' => 'ptr', 'Potri.019G084100' => 'ptr', 'Pp3c14_23720' => 'ppa', 'Pp3c16_6340' => 'ppa', 'Pp3c23_13420' => 'ppa', 'Pp3c24_2740' => 'ppa', 'Pp3c25_860' => 'ppa', 'Pp3c8_21750' => 'ppa', 'Prupe.1G273000' => 'ppe', 'Prupe.1G273700' => 'ppe', 'Prupe.1G274100' => 'ppe', 'Prupe.2G023300' => 'ppe', 'Prupe.4G048000' => 'ppe', 'Prupe.4G080400' => 'ppe', 'Prupe.4G181200' => 'ppe', 'Prupe.8G056900' => 'ppe', 'Prupe.8G168700' => 'ppe', 'Psat1g189080' => 'psa', 'Psat1g204760' => 'psa', 'Psat4g175560' => 'psa', 'Psat4g177720' => 'psa', 'Psat5g244240' => 'psa', 'Psat6g010720' => 'psa', 'Psat6g187200' => 'psa', 'Psat7g072040' => 'psa', 'PSO017G3501' => 'pso', 'PSO063G2148' => 'pso', 'PSO063G5608' => 'pso', 'PSO210G6392' => 'pso', 'PSO541G2319' => 'pso', 'PSO541G2836' => 'pso', 'PSO541G4012' => 'pso', 'PSO541G6253' => 'pso', 'PSO675G0580' => 'pso', 'PSO675G0856' => 'pso', 'PSO675G5635' => 'pso', 'PSO675G9157' => 'pso', 'PSO832G1660' => 'pso', 'PSO832G1969' => 'pso', 'QL02p007186' => 'qlo', 'QL02p033904' => 'qlo', 'QL03p064391' => 'qlo', 'QL05p040593' => 'qlo', 'QL05p058242' => 'qlo', 'QL08p021825' => 'qlo', 'QL11p004981' => 'qlo', 'RcHm_v2.0_Chr1g0318301' => 'rch', 'RcHm_v2.0_Chr4g0418501' => 'rch', 'RcHm_v2.0_Chr4g0439971' => 'rch', 'RcHm_v2.0_Chr5g0008541' => 'rch', 'RcHm_v2.0_Chr5g0014101' => 'rch', 'RcHm_v2.0_Chr5g0014131' => 'rch', 'RcHm_v2.0_Chr5g0033621' => 'rch', 'RcHm_v2.0_Chr6g0272041' => 'rch', 'RcHm_v2.0_Chr6g0278831' => 'rch', 'Rhsim02G0130400' => 'rsi', 'Rhsim02G0171100' => 'rsi', 'Rhsim05G0053000' => 'rsi', 'Rhsim05G0053100' => 'rsi', 'Rhsim06G0096500' => 'rsi', 'Rhsim06G0096600' => 'rsi', 'Rhsim06G0199100' => 'rsi', 'Rhsim12G0062300' => 'rsi', 'Rhsim12G0062800' => 'rsi', 'Sabra02G0118600' => 'sbr', 'Sabra04G0027300' => 'sbr', 'Sabra04G0119500' => 'sbr', 'Sabra08G0112500' => 'sbr', 'Sabra11G0036800' => 'sbr', 'Sabra11G0103800' => 'sbr', 'Sabra13G0096300' => 'sbr', 'Sabra16G0262300' => 'sbr', 'Sabra18G0091700' => 'sbr', 'Sabra19G0095400' => 'sbr', 'SalBow6G3080' => 'sbo', 'SalBow7G1157' => 'sbo', 'SalBow7G2123' => 'sbo', 'SalBow7G2285' => 'sbo', 'SalBow7G3537' => 'sbo', 'SalBow8G2947' => 'sbo', 'SalBow8G4463' => 'sbo', 'SalBow8G5466' => 'sbo', 'Sc01g0001750' => 'sci', 'Sc02g0006640' => 'sci', 'Sc02g0006670' => 'sci', 'Sc04g0008220' => 'sci', 'Sc05g0006190' => 'sci', 'Sc08g0002760' => 'sci', 'Sc17g0006170' => 'sci', 'Sc22g0002050' => 'sci', 'Sc23g0001190' => 'sci', 'Sc24g0000980' => 'sci', 'Sed0006245' => 'sed', 'Sed0007543' => 'sed', 'Sed0009411' => 'sed', 'Sed0010765' => 'sed', 'Sed0012944' => 'sed', 'Sed0014682' => 'sed', 'Sed0016174' => 'sed', 'Sed0016796' => 'sed', 'Sed0020317' => 'sed', 'Sed0021467' => 'sed', 'SEGI_01316' => 'sgi', 'SEGI_03374' => 'sgi', 'SEGI_16265' => 'sgi', 'SEGI_18569' => 'sgi', 'SEGI_20351' => 'sgi', 'SEGI_26395' => 'sgi', 'SEGI_29469' => 'sgi', 'SEGI_34771' => 'sgi', 'SEGI_36769' => 'sgi', 'SEGI_37139' => 'sgi', 'SGA_v2.0_scaffold100G29687' => 'sas', 'SGA_v2.0_scaffold118G32472' => 'sas', 'SGA_v2.0_scaffold14G07051' => 'sas', 'SGA_v2.0_scaffold183G39845' => 'sas', 'SGA_v2.0_scaffold1G00174' => 'sas', 'SGA_v2.0_scaffold22G09714' => 'sas', 'SGA_v2.0_scaffold333G48992' => 'sas', 'SGA_v2.0_scaffold46G17491' => 'sas', 'SGA_v2.0_scaffold49G18294' => 'sas', 'SGA_v2.0_scaffold63G21658' => 'sas', 'SHI01741' => 'shi', 'SHI05771' => 'shi', 'SHI18077' => 'shi', 'SHI20525' => 'shi', 'SHI20527' => 'shi', 'SHI20528' => 'shi', 'SMO172G0185' => 'smo', 'SMO198G0020' => 'smo', 'SMO351G0006' => 'smo', 'SMO356G0118' => 'smo', 'SMO358G0296' => 'smo', 'SMO367G0079' => 'smo', 'SMO367G1277' => 'smo', 'Solyc01g014220.3' => 'sly', 'Solyc01g111770.2' => 'sly', 'Solyc02g078180.3' => 'sly', 'Solyc03g006430.3' => 'sly', 'Solyc03g006456.1' => 'sly', 'Solyc03g079860.2' => 'sly', 'Solyc04g079770.3' => 'sly', 'Solyc05g007430.4' => 'sly', 'Solyc07g063150.3' => 'sly', 'Solyc08g016620.3' => 'sly', 'Solyc09g057590.3' => 'sly', 'Solyc09g057600.1' => 'sly', 'Solyc10g009050.3' => 'sly', 'Solyc11g017420.2' => 'sly', 'Sopen01g053810' => 'spe', 'Sopen02g023040' => 'spe', 'Sopen03g002440' => 'spe', 'Sopen04g033350' => 'spe', 'Sopen05g003310' => 'spe', 'Sopen07g004050' => 'spe', 'Sopen07g031340' => 'spe', 'Sopen08g006990' => 'spe', 'Sopen10g004830' => 'spe', 'Sopen11g009370' => 'spe', 'Sp1g24450' => 'spa', 'Sp1g29670' => 'spa', 'Sp1g39600' => 'spa', 'Sp2g11080' => 'spa', 'Sp2g13970' => 'spa', 'Sp4g16130' => 'spa', 'Sp6g13080' => 'spa', 'Sp7g37270' => 'spa', 'TAR371G0065' => 'tar', 'TAR376G0340' => 'tar', 'TAR376G0435' => 'tar', 'TAR381G0002' => 'tar', 'TAR381G1236' => 'tar', 'TAR624G0055' => 'tar', 'TAR624G0324' => 'tar', 'TAR624G0696' => 'tar', 'TAR624G0906' => 'tar', 'TAR625G0107' => 'tar', 'TAR626G0015' => 'tar', 'TAR626G1356' => 'tar', 'TAR627G0888' => 'tar', 'TAR628G0399' => 'tar', 'TAR628G1327' => 'tar', 'TAR629G2831' => 'tar', 'TAR629G2874' => 'tar', 'TAR633G1432' => 'tar', 'TAR633G2771' => 'tar', 'THA.LOC104803394' => 'tha', 'THA.LOC104805153' => 'tha', 'THA.LOC104806784' => 'tha', 'THA.LOC104810473' => 'tha', 'THA.LOC104813100' => 'tha', 'THA.LOC104814215' => 'tha', 'THA.LOC104815554' => 'tha', 'THA.LOC104820544' => 'tha', 'THA.LOC104824754' => 'tha', 'THA.LOC104827717' => 'tha', 'Thecc.02G031400' => 'tca', 'Thecc.02G055900' => 'tca', 'Thecc.02G350800' => 'tca', 'Thecc.06G150900' => 'tca', 'Thecc.06G186600' => 'tca', 'Thecc.07G089600' => 'tca', 'Thecc.08G020400' => 'tca', 'Thecc.08G182100' => 'tca', 'Thhalv10000873m.g' => 'esa', 'Thhalv10004185m.g' => 'esa', 'Thhalv10006981m.g' => 'esa', 'Thhalv10007204m.g' => 'esa', 'Thhalv10011374m.g' => 'esa', 'Thhalv10013482m.g' => 'esa', 'Thhalv10017801m.g' => 'esa', 'Thhalv10024983m.g' => 'esa', 'TPR.G12072' => 'tpr', 'TPR.G15769' => 'tpr', 'TPR.G16504' => 'tpr', 'TPR.G16506' => 'tpr', 'TPR.G24345' => 'tpr', 'TPR.G26666' => 'tpr', 'TPR.G27320' => 'tpr', 'TPR.G31819' => 'tpr', 'TPR.G38879' => 'tpr', 'TPR.G39015' => 'tpr', 'TPR.G8819' => 'tpr', 'TWI09G0924' => 'twi', 'TWI12G0811' => 'twi', 'TWI12G1294' => 'twi', 'TWI31G0150' => 'twi', 'TWI36G1262' => 'twi', 'TWI38G1287' => 'twi', 'TWI38G1633' => 'twi', 'TWI38G1982' => 'twi', 'TWI39G0116' => 'twi', 'TWI60G1011' => 'twi', 'TWI63G0171' => 'twi', 'TWI73G0839' => 'twi', 'TWI79G1511' => 'twi', 'unitig_0.g915' => 'ugi', 'unitig_0.g916' => 'ugi', 'unitig_21.g20219' => 'ugi', 'unitig_21.g20416' => 'ugi', 'unitig_578.g16132' => 'ugi', 'unitig_578.g16718' => 'ugi', 'unitig_62.g23481' => 'ugi', 'unitig_744.g24535' => 'ugi', 'unitig_749.g13525' => 'ugi', 'vmacro01248' => 'vma', 'vmacro02290' => 'vma', 'vmacro10946' => 'vma', 'vmacro11865' => 'vma', 'vmacro12493' => 'vma', 'vmacro17322' => 'vma', 'vmacro21599' => 'vma', 'vmacro23041' => 'vma', 'VMungo0251G0004' => 'vmu', 'VMungo0251G2639' => 'vmu', 'VMungo0251G2967' => 'vmu', 'VMungo0540G0864' => 'vmu', 'VMungo0540G1569' => 'vmu', 'VMungo0647G0317' => 'vmu', 'VMungo0720G1373' => 'vmu', 'VMungo0720G1508' => 'vmu', 'VMungo1080G0485' => 'vmu', 'VMungo1215G3177' => 'vmu', 'Zm00001eb112600' => 'zma', 'Zm00001eb120220' => 'zma', 'Zm00001eb153240' => 'zma', 'Zm00001eb168880' => 'zma', 'Zm00001eb213920' => 'zma', 'Zm00001eb228280' => 'zma', 'Zm00001eb254580' => 'zma', 'Zm00001eb272180' => 'zma', 'Zm00001eb293190' => 'zma', 'Zm00001eb322930' => 'zma', 'Zm00001eb353360' => 'zma', 'Zm00001eb353390' => 'zma', 'Zm00001eb353430' => 'zma', 'Zm00001eb353440' => 'zma', 'Zm00001eb353780' => 'zma' ) $gf_id = 'HOM05D000499' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000499' ) $data_identifier = 'HOM05D000499' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 29, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 12, 'amhyb' => (int) 8, 'aly' => (int) 12, 'aox' => (int) 9, 'arhy' => (int) 26, 'ath' => (int) 8, 'atr' => (int) 7, 'acertr' => (int) 10, 'cqu' => (int) 15, 'bca' => (int) 29, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 11, 'cansat' => (int) 8, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 9, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 8, 'cpa' => (int) 10, 'csa' => (int) 7, 'camsi' => (int) 20, 'dca' => (int) 8, 'din' => (int) 12, 'dzi' => (int) 14, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 6, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 38, 'gra' => (int) 16, 'vvi' => (int) 8, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 5, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 11, 'lja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 11, 'mpo' => (int) 3, 'mbi' => (int) 14, 'mdo' => (int) 14, 'mtr' => (int) 8, 'cme' => (int) 9, 'egut' => (int) 9, 'ama' => (int) 11, 'nta' => (int) 17, 'nnu' => (int) 11, 'oeu' => (int) 18, 'osa' => (int) 8, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 6, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 9, 'rsi' => (int) 9, 'sbr' => (int) 10, 'sbo' => (int) 8, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 10, 'sas' => (int) 10, 'shi' => (int) 6, 'smo' => (int) 7, 'sly' => (int) 14, 'spe' => (int) 10, 'spa' => (int) 8, 'tar' => (int) 19, 'tha' => (int) 10, 'tca' => (int) 8, 'esa' => (int) 8, 'tpr' => (int) 11, 'twi' => (int) 13, 'ugi' => (int) 9, 'vma' => (int) 8, 'vmu' => (int) 10, 'zma' => (int) 15 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb353780' $species_info = array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ) $local_species = 'cbr' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000499', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1066', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p29780' => 'bna', 'A02p33180' => 'bna', 'A03p16470' => 'bna', 'A03p66010' => 'bna', 'A04p25970' => 'bna', 'A06p01270' => 'bna', 'A06p46080' => 'bna', 'A07p11400' => 'bna', 'A08p01840' => 'bna', 'A08p08230' => 'bna', 'A08p25740' => 'bna', 'A09p32070' => 'bna', 'A09p37830' => 'bna', 'A09p42840' => 'bna', 'A09p42850' => 'bna', 'Aa31LG10G2060' => 'aar', 'Aa31LG2G7410' => 'aar', 'Aa31LG6G10200' => 'aar', 'Aa31LG6G16680' => 'aar', 'Aa31LG6G8470' => 'aar', 'Aa31LG9G12730' => 'aar', 'Aa31LG9G13680' => 'aar', 'Aa31LG9G14920' => 'aar', 'Aa31LG9G6650' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4977' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5467' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3254' => 'aag', 'Actinidia02578' => 'ach', 'Actinidia07693' => 'ach', 'Actinidia08413' => 'ach', 'Actinidia08414' => 'ach', 'Actinidia15289' => 'ach', 'Actinidia19871' => 'ach', 'Actinidia21475' => 'ach', 'Actinidia22576' => 'ach', 'Actinidia28327' => 'ach', 'Actinidia32491' => 'ach', 'Actinidia39463' => 'ach', 'Actinidia39571' => 'ach', 'Ah.01g013750' => 'amhyb', 'Ah.01g023210' => 'amhyb', 'Ah.04g164850' => 'amhyb', 'Ah.05g178060' => 'amhyb', 'Ah.07g204270' => 'amhyb', 'Ah.07g208480' => 'amhyb', 'Ah.09g237410' => 'amhyb', 'Ah.14g089460' => 'amhyb', 'AL1G41790' => 'aly', 'AL1G49050' => 'aly', 'AL1G53810' => 'aly', 'AL1G61400' => 'aly', 'AL4G18580' => 'aly', 'AL5G12510' => 'aly', 'AL5G12540' => 'aly', 'AL6G43230' => 'aly', 'AL7G10370' => 'aly', 'AL7G19250' => 'aly', 'AL8G12240' => 'aly', 'AL8G18540' => 'aly', 'Aqoxy1G02409' => 'aox', 'Aqoxy2G03993' => 'aox', 'Aqoxy3G03357' => 'aox', 'Aqoxy4G00785' => 'aox', 'Aqoxy5G02598' => 'aox', 'Aqoxy6G00132' => 'aox', 'Aqoxy7G01776' => 'aox', 'Aqoxy7G02316' => 'aox', 'Aqoxy7G03973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.12AFKW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B8730' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27IQR1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3F75VG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3RE0GA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41TCQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.527VTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FIR39' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5W8UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DA38EV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ63HS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H1I32C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HC27T5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4M8AP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7N3CZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9UVDZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LS1NQA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT1D4B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SKC4TM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCFV76' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF9Q1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQWD9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1ZM88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WE07RT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YCK7VH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJE6Q6' => 'arhy', 'AT1G28240' => 'ath', 'AT1G34550' => 'ath', 'AT1G53040' => 'ath', 'AT2G02910' => 'ath', 'AT4G09630' => 'ath', 'AT4G38500' => 'ath', 'AT5G42660' => 'ath', 'AT5G46220' => 'ath', 'ATR0152G026' => 'atr', 'ATR0564G343' => 'atr', 'ATR0706G151' => 'atr', 'ATR0733G207' => 'atr', 'ATR0751G234' => 'atr', 'ATR0807G048' => 'atr', 'ATR1091G084' => 'atr', 'Atru.chr10.1229' => 'acertr', 'Atru.chr10.1230' => 'acertr', 'Atru.chr10.1874' => 'acertr', 'Atru.chr11.1808' => 'acertr', 'Atru.chr13.1795' => 'acertr', 'Atru.chr13.570' => 'acertr', 'Atru.chr2.2608' => 'acertr', 'Atru.chr2.2609' => 'acertr', 'Atru.chr5.3428' => 'acertr', 'Atru.chr8.1171' => 'acertr', 'AUR62004651' => 'cqu', 'AUR62008675' => 'cqu', 'AUR62010014' => 'cqu', 'AUR62013004' => 'cqu', 'AUR62014825' => 'cqu', 'AUR62015015' => 'cqu', 'AUR62015151' => 'cqu', 'AUR62017020' => 'cqu', 'AUR62019422' => 'cqu', 'AUR62023570' => 'cqu', 'AUR62025571' => 'cqu', 'AUR62029098' => 'cqu', 'AUR62033863' => 'cqu', 'AUR62034296' => 'cqu', 'AUR62040075' => 'cqu', 'BcaB02g07334' => 'bca', 'BcaB02g10575' => 'bca', 'BcaB03g12119' => 'bca', 'BcaB03g12120' => 'bca', 'BcaB03g13945' => 'bca', 'BcaB04g17123' => 'bca', 'BcaB04g17867' => 'bca', 'BcaB04g19839' => 'bca', 'BcaB07g30317' => 'bca', 'BcaB07g32432' => 'bca', 'BcaB07g33362' => 'bca', 'BcaB08g36611' => 'bca', 'BcaC01g00028' => 'bca', 'BcaC01g01356' => 'bca', 'BcaC01g02034' => 'bca', 'BcaC01g06051' => 'bca', 'BcaC03g16839' => 'bca', 'BcaC03g17176' => 'bca', 'BcaC05g26829' => 'bca', 'BcaC06g31490' => 'bca', 'BcaC06g35344' => 'bca', 'BcaC06g36570' => 'bca', 'BcaC07g37537' => 'bca', 'BcaC08g43491' => 'bca', 'BcaC08g43773' => 'bca', 'BcaNung00234' => 'bca', 'BcaNung01982' => 'bca', 'BcaNung03707' => 'bca', 'BcaNung06454' => 'bca', 'BolC2t10762H' => 'bol', 'BolC2t11191H' => 'bol', 'BolC3t14322H' => 'bol', 'BolC3t19747H' => 'bol', 'BolC3t21425H' => 'bol', 'BolC4t27800H' => 'bol', 'BolC5t31423H' => 'bol', 'BolC6t35951H' => 'bol', 'BolC6t36282H' => 'bol', 'BolC7t40678H' => 'bol', 'BolC7t40679H' => 'bol', 'BolC7t42222H' => 'bol', 'BolC7t43492H' => 'bol', 'BolC7t46785H' => 'bol', 'BolC8t47853H' => 'bol', 'BolC9t56805H' => 'bol', 'BraA02t08000Z' => 'bra', 'BraA02t08341Z' => 'bra', 'BraA03t10936Z' => 'bra', 'BraA03t15657Z' => 'bra', 'BraA04t18100Z' => 'bra', 'BraA05t20523Z' => 'bra', 'BraA06t23353Z' => 'bra', 'BraA06t27473Z' => 'bra', 'BraA06t27769Z' => 'bra', 'BraA07t28928Z' => 'bra', 'BraA08t32236Z' => 'bra', 'BraA08t32841Z' => 'bra', 'BraA08t34524Z' => 'bra', 'BraA09t38742Z' => 'bra', 'BraA09t39295Z' => 'bra', 'C02p47180' => 'bna', 'C02p50990' => 'bna', 'C03p19360' => 'bna', 'C03p74950' => 'bna', 'C03p91000' => 'bna', 'C04p63260' => 'bna', 'C05p27050' => 'bna', 'C06p08750' => 'bna', 'C06p11490' => 'bna', 'C07p02820' => 'bna', 'C07p17180' => 'bna', 'C07p29440' => 'bna', 'C07p63730' => 'bna', 'C09p39260' => 'bna', 'CAN.G1164.34' => 'can', 'CAN.G1164.39' => 'can', 'CAN.G1530.3' => 'can', 'CAN.G162.61' => 'can', 'CAN.G176.6' => 'can', 'CAN.G289.49' => 'can', 'CAN.G370.21' => 'can', 'CAN.G370.22' => 'can', 'CAN.G371.117' => 'can', 'CAN.G58.37' => 'can', 'CAN.G588.98' => 'can', 'CANSAT21G2266' => 'cansat', 'CANSAT25G2799' => 'cansat', 'CANSAT35G0862' => 'cansat', 'CANSAT35G1704' => 'cansat', 'CANSAT35G1760' => 'cansat', 'CANSAT56G3971' => 'cansat', 'CANSAT56G4116' => 'cansat', 'CANSAT80G1259' => 'cansat', 'CARHR027730' => 'chi', 'CARHR033880' => 'chi', 'CARHR043270' => 'chi', 'CARHR145330' => 'chi', 'CARHR145340' => 'chi', 'CARHR175570' => 'chi', 'CARHR181570' => 'chi', 'CARHR258470' => 'chi', 'CARHR260490' => 'chi', 'CARHR294220' => 'chi', 'Carub.0001s2668' => 'cru', 'Carub.0001s3257' => 'cru', 'Carub.0001s4220' => 'cru', 'Carub.0005s0179' => 'cru', 'Carub.0006s2807' => 'cru', 'Carub.0007s0039' => 'cru', 'Carub.0008s0169' => 'cru', 'Carub.0008s0636' => 'cru', 'Ca_00338_v3' => 'car', 'Ca_00542_v3' => 'car', 'Ca_01844_v3' => 'car', 'Ca_10611_v3' => 'car', 'Ca_13326_v3' => 'car', 'Ca_17944_v3' => 'car', 'Ca_18546_v3' => 'car', 'Ca_24219_v3' => 'car', 'Ca_29972_v3' => 'car', 'CBR_g3681' => 'cbr', 'CBR_g40021' => 'cbr', 'Cc01_g08140' => 'ccan', 'Cc02_g13410' => 'ccan', 'Cc02_g37480' => 'ccan', 'Cc05_g12030' => 'ccan', 'Cc09_g03370' => 'ccan', 'Cc09_g10300' => 'ccan', 'Cc10_g03530' => 'ccan', 'Cc10_g11380' => 'ccan', 'CDE01G0176' => 'cde', 'CDE02G0675' => 'cde', 'CDE02G0942' => 'cde', 'CDE02G1153' => 'cde', 'CDE02G4177' => 'cde', 'CDE04G2117' => 'cde', 'CDE04G2736' => 'cde', 'CDE08G1161' => 'cde', 'CDE09G1238' => 'cde', 'Cfa000467' => 'cfa', 'Cfa000947' => 'cfa', 'Cfa004969' => 'cfa', 'Cfa005284' => 'cfa', 'Cfa008993' => 'cfa', 'Cfa018187' => 'cfa', 'Cfa018454' => 'cfa', 'Cfa020585' => 'cfa', 'Ciclev10000424m.g' => 'ccl', 'Ciclev10003605m.g' => 'ccl', 'Ciclev10007828m.g' => 'ccl', 'Ciclev10014620m.g' => 'ccl', 'Ciclev10015169m.g' => 'ccl', 'Ciclev10018291m.g' => 'ccl', 'Ciclev10028256m.g' => 'ccl', 'Ciclev10033822m.g' => 'ccl', 'CiPaw.05G060300' => 'cil', 'CiPaw.05G085000' => 'cil', 'CiPaw.06G083700' => 'cil', 'CiPaw.06G120300' => 'cil', 'CiPaw.09G060500' => 'cil', 'CiPaw.09G123800' => 'cil', 'CiPaw.11G169700' => 'cil', 'CiPaw.12G118300' => 'cil', 'CiPaw.15G071000' => 'cil', 'CiPaw.15G081900' => 'cil', 'ClCG01G024610' => 'cla', 'ClCG03G006070' => 'cla', 'ClCG05G019250' => 'cla', 'ClCG09G009500' => 'cla', 'ClCG11G008200' => 'cla', 'ClCG11G018080' => 'cla', 'COL.COLO4_17373' => 'col', 'COL.COLO4_22994' => 'col', 'COL.COLO4_26389' => 'col', 'COL.COLO4_27170' => 'col', 'COL.COLO4_31074' => 'col', 'COL.COLO4_31465' => 'col', 'COL.COLO4_36438' => 'col', 'COL.COLO4_36439' => 'col', 'Cpa.g.c38781' => 'cpa', 'Cpa.g.sc128.12' => 'cpa', 'Cpa.g.sc166.7' => 'cpa', 'Cpa.g.sc166.8' => 'cpa', 'Cpa.g.sc20.111' => 'cpa', 'Cpa.g.sc27.31' => 'cpa', 'Cpa.g.sc64.36' => 'cpa', 'Cpa.g.sc64.37' => 'cpa', 'Cpa.g.sc66.49' => 'cpa', 'Cpa.g.sc80.64' => 'cpa', 'CsaV3_1G012320' => 'csa', 'CsaV3_2G008480' => 'csa', 'CsaV3_2G033450' => 'csa', 'CsaV3_3G044830' => 'csa', 'CsaV3_4G033710' => 'csa', 'CsaV3_6G051730' => 'csa', 'CsaV3_7G025350' => 'csa', 'CSS0001067' => 'camsi', 'CSS0005996' => 'camsi', 'CSS0006590' => 'camsi', 'CSS0009673' => 'camsi', 'CSS0010201' => 'camsi', 'CSS0010549' => 'camsi', 'CSS0011364' => 'camsi', 'CSS0014473' => 'camsi', 'CSS0014961' => 'camsi', 'CSS0020191' => 'camsi', 'CSS0021165' => 'camsi', 'CSS0022306' => 'camsi', 'CSS0030591' => 'camsi', 'CSS0030696' => 'camsi', 'CSS0032653' => 'camsi', 'CSS0037487' => 'camsi', 'CSS0041102' => 'camsi', 'CSS0041261' => 'camsi', 'CSS0046246' => 'camsi', 'CSS0049256' => 'camsi', 'DCAR_004075' => 'dca', 'DCAR_011538' => 'dca', 'DCAR_019553' => 'dca', 'DCAR_020952' => 'dca', 'DCAR_021739' => 'dca', 'DCAR_027407' => 'dca', 'DCAR_027913' => 'dca', 'DCAR_028066' => 'dca', 'Dinv05899' => 'din', 'Dinv07563' => 'din', 'Dinv08010' => 'din', 'Dinv14125' => 'din', 'Dinv20172' => 'din', 'Dinv30743' => 'din', 'Dinv31229' => 'din', 'Dinv34162' => 'din', 'Dinv36028' => 'din', 'Dinv39368' => 'din', 'Dinv40565' => 'din', 'Dinv41706' => 'din', 'Duzib052G0089' => 'dzi', 'Duzib116G0641' => 'dzi', 'Duzib132G0069' => 'dzi', 'Duzib132G1219' => 'dzi', 'Duzib147G0278' => 'dzi', 'Duzib160G0480' => 'dzi', 'Duzib170G0661' => 'dzi', 'Duzib177G0591' => 'dzi', 'Duzib187G1353' => 'dzi', 'Duzib192G0858' => 'dzi', 'Duzib192G0883' => 'dzi', 'Duzib213G0506' => 'dzi', 'Duzib235G0289' => 'dzi', 'Duzib251G0422' => 'dzi', 'ECA232G3898' => 'eca', 'ECA233G5950' => 'eca', 'ECA234G1699' => 'eca', 'ECA234G2421' => 'eca', 'ECA236G0426' => 'eca', 'ECA236G4331' => 'eca', 'ECA248G2573' => 'eca', 'EL10Ac1g00077' => 'bvu', 'EL10Ac1g01746' => 'bvu', 'EL10Ac2g03464' => 'bvu', 'EL10Ac4g08176' => 'bvu', 'EL10Ac7g17521' => 'bvu', 'EL10Ac8g20386' => 'bvu', 'EL10Ac9g21343' => 'bvu', 'EL10Ac9g22688' => 'bvu', 'Eucgr.B03434' => 'egr', 'Eucgr.D00618' => 'egr', 'Eucgr.E02395' => 'egr', 'Eucgr.F01129' => 'egr', 'Eucgr.F02622' => 'egr', 'Eucgr.F04207' => 'egr', 'FAN01G0570' => 'fan', 'FAN03G3351' => 'fan', 'FAN06G3702' => 'fan', 'FAN07G2149' => 'fan', 'FAN10G3758' => 'fan', 'FAN11G1170' => 'fan', 'FAN11G2050' => 'fan', 'FAN11G2724' => 'fan', 'FAN12G1700' => 'fan', 'FAN12G2028' => 'fan', 'FAN15G1160' => 'fan', 'FAN15G3063' => 'fan', 'FAN16G2540' => 'fan', 'FAN16G3077' => 'fan', 'FAN16G3624' => 'fan', 'FAN17G0221' => 'fan', 'FAN20G2492' => 'fan', 'FAN20G2905' => 'fan', 'FAN21G0548' => 'fan', 'FAN21G1300' => 'fan', 'FAN22G0077' => 'fan', 'FAN22G1315' => 'fan', 'FAN24G1280' => 'fan', 'FAN24G1445' => 'fan', 'FAN24G3527' => 'fan', 'FAN25G0464' => 'fan', 'FAN25G2885' => 'fan', 'FAN25G3270' => 'fan', 'FAN27G1101' => 'fan', 'FAN27G2846' => 'fan', 'FAN27G3524' => 'fan', 'FvH4_2g11770' => 'fve', 'FvH4_2g15630' => 'fve', 'FvH4_3g05570' => 'fve', 'FvH4_3g09110' => 'fve', 'FvH4_3g19940' => 'fve', 'FvH4_4g04821' => 'fve', 'FvH4_4g31480' => 'fve', 'FvH4_7g01740' => 'fve', 'Glyma.05G130400' => 'gma', 'Glyma.05G156400' => 'gma', 'Glyma.07G197000' => 'gma', 'Glyma.08G085151' => 'gma', 'Glyma.08G114500' => 'gma', 'Glyma.08G300400' => 'gma', 'Glyma.10G215800' => 'gma', 'Glyma.12G224400' => 'gma', 'Glyma.13G179300' => 'gma', 'Glyma.13G218151' => 'gma', 'Glyma.13G238800' => 'gma', 'Glyma.13G276900' => 'gma', 'Glyma.14G078200' => 'gma', 'Glyma.15G074500' => 'gma', 'Glyma.15G094100' => 'gma', 'Glyma.17G247200' => 'gma', 'Glyma.18G120100' => 'gma', 'Glyma.20G176000' => 'gma', 'Gohir.A01G063600' => 'ghi', 'Gohir.A01G170301' => 'ghi', 'Gohir.A02G060500' => 'ghi', 'Gohir.A05G133850' => 'ghi', 'Gohir.A05G161400' => 'ghi', 'Gohir.A06G012900' => 'ghi', 'Gohir.A06G035901' => 'ghi', 'Gohir.A06G127100' => 'ghi', 'Gohir.A06G210500' => 'ghi', 'Gohir.A08G008650' => 'ghi', 'Gohir.A09G072700' => 'ghi', 'Gohir.A09G088301' => 'ghi', 'Gohir.A10G040600' => 'ghi', 'Gohir.A12G036300' => 'ghi', 'Gohir.A12G143350' => 'ghi', 'Gohir.A12G165500' => 'ghi', 'Gohir.A13G145700' => 'ghi', 'Gohir.D01G050000' => 'ghi', 'Gohir.D01G051366' => 'ghi', 'Gohir.D01G161350' => 'ghi', 'Gohir.D02G065900' => 'ghi', 'Gohir.D05G164200' => 'ghi', 'Gohir.D05G355500' => 'ghi', 'Gohir.D06G010400' => 'ghi', 'Gohir.D06G111250' => 'ghi', 'Gohir.D06G132000' => 'ghi', 'Gohir.D06G210500' => 'ghi', 'Gohir.D07G165675' => 'ghi', 'Gohir.D08G062240' => 'ghi', 'Gohir.D08G086101' => 'ghi', 'Gohir.D08G138060' => 'ghi', 'Gohir.D09G072300' => 'ghi', 'Gohir.D10G041400' => 'ghi', 'Gohir.D11G191020' => 'ghi', 'Gohir.D11G212066' => 'ghi', 'Gohir.D12G036300' => 'ghi', 'Gohir.D12G168600' => 'ghi', 'Gohir.D13G150600' => 'ghi', 'Gorai.001G057300' => 'gra', 'Gorai.002G069900' => 'gra', 'Gorai.002G200000' => 'gra', 'Gorai.003G067600' => 'gra', 'Gorai.005G074800' => 'gra', 'Gorai.006G087300' => 'gra', 'Gorai.008G037500' => 'gra', 'Gorai.008G181400' => 'gra', 'Gorai.009G169400' => 'gra', 'Gorai.009G387900' => 'gra', 'Gorai.010G013300' => 'gra', 'Gorai.010G153800' => 'gra', 'Gorai.010G255800' => 'gra', 'Gorai.011G043700' => 'gra', 'Gorai.011G198900' => 'gra', 'Gorai.013G168400' => 'gra', 'GSVIVG01005212001' => 'vvi', 'GSVIVG01006163001' => 'vvi', 'GSVIVG01009625001' => 'vvi', 'GSVIVG01014338001' => 'vvi', 'GSVIVG01020005001' => 'vvi', 'GSVIVG01021450001' => 'vvi', 'GSVIVG01023975001' => 'vvi', 'GSVIVG01034490001' => 'vvi', 'HanXRQChr04g0112071' => 'han', 'HanXRQChr05g0131151' => 'han', 'HanXRQChr09g0262371' => 'han', 'HanXRQChr09g0268401' => 'han', 'HanXRQChr10g0279241' => 'han', 'HanXRQChr10g0297961' => 'han', 'HanXRQChr11g0326231' => 'han', 'HanXRQChr11g0328471' => 'han', 'HanXRQChr16g0507941' => 'han', 'HanXRQChr17g0560211' => 'han', 'Haze_02108' => 'cav', 'Haze_02428' => 'cav', 'Haze_05593' => 'cav', 'Haze_06448' => 'cav', 'Haze_09427' => 'cav', 'Haze_12022' => 'cav', 'Haze_17612' => 'cav', 'Haze_17928' => 'cav', 'Hma1.2p1_0032F.1_g019250' => 'hma', 'Hma1.2p1_0163F.1_g072690' => 'hma', 'Hma1.2p1_0265F.1_g106710' => 'hma', 'Hma1.2p1_0286F.1_g113970' => 'hma', 'Hma1.2p1_0363F.1_g136640' => 'hma', 'Hma1.2p1_0584F.1_g183470' => 'hma', 'Hma1.2p1_0885F.1_g232570' => 'hma', 'HPP92_006022' => 'vpl', 'HPP92_007320' => 'vpl', 'HPP92_011521' => 'vpl', 'HPP92_019387' => 'vpl', 'HPP92_024038' => 'vpl', 'Hund05891' => 'sun', 'Hund06450' => 'sun', 'Hund12053' => 'sun', 'Hund16800' => 'sun', 'Hund21222' => 'sun', 'Hund22896' => 'sun', 'Hund23746' => 'sun', 'Hund27083' => 'sun', 'Lalb_Chr02g0141831' => 'lal', 'Lalb_Chr02g0141841' => 'lal', 'Lalb_Chr05g0220411' => 'lal', 'Lalb_Chr06g0162081' => 'lal', 'Lalb_Chr09g0327651' => 'lal', 'Lalb_Chr13g0295051' => 'lal', 'Lalb_Chr15g0086801' => 'lal', 'Lalb_Chr16g0383781' => 'lal', 'Lalb_Chr16g0383791' => 'lal', 'Lalb_Chr18g0055441' => 'lal', 'Lalb_Chr18g0059611' => 'lal', 'Lalb_Chr20g0109661' => 'lal', 'Lalb_Chr20g0109831' => 'lal', 'Lalb_Chr20g0121871' => 'lal', 'Lalb_Chr22g0355361' => 'lal', 'Lalb_Chr25g0286371' => 'lal', 'Lj1A1187G43' => 'lonja', 'Lj1A1205T50' => 'lonja', 'Lj1A800G33' => 'lonja', 'Lj1C1187T7' => 'lonja', 'Lj1C843T11' => 'lonja', 'Lj1g0010940' => 'lja', 'Lj2A288T69' => 'lonja', 'Lj3g0024276' => 'lja', 'Lj4A47T76' => 'lonja', 'Lj4g0005805' => 'lja', 'Lj4g0006097' => 'lja', 'Lj4g0008528' => 'lja', 'Lj4g0024907' => 'lja', 'Lj5g0012472' => 'lja', 'Lj5g0018648' => 'lja', 'Lj6C789G1' => 'lonja', 'Lj6g0004000' => 'lja', 'Lj7A292G67' => 'lonja', 'Lj7A292T64' => 'lonja', 'Lj9A400T58' => 'lonja', 'Lsat_1_v5_gn_1_126181' => 'lsa', 'Lsat_1_v5_gn_4_123041' => 'lsa', 'Lsat_1_v5_gn_4_133620' => 'lsa', 'Lsat_1_v5_gn_4_53221' => 'lsa', 'Lsat_1_v5_gn_4_71961' => 'lsa', 'Lsat_1_v5_gn_7_105241' => 'lsa', 'Lsat_1_v5_gn_7_21361' => 'lsa', 'Lsat_1_v5_gn_7_28860' => 'lsa', 'Lsat_1_v5_gn_7_31260' => 'lsa', 'Lsat_1_v5_gn_8_52801' => 'lsa', 'Manes.02G191400' => 'mes', 'Manes.03G110100' => 'mes', 'Manes.04G071100' => 'mes', 'Manes.05G100500' => 'mes', 'Manes.05G164700' => 'mes', 'Manes.15G087000' => 'mes', 'Manes.15G121500' => 'mes', 'Manes.16G028300' => 'mes', 'Manes.17G046100' => 'mes', 'Manes.17G069800' => 'mes', 'Manes.18G100500' => 'mes', 'Mapoly0002s0109' => 'mpo', 'Mapoly0024s0007' => 'mpo', 'Mapoly0089s0032' => 'mpo', 'MBI04_g42241_MAGBIO' => 'mbi', 'MBI05_g11988_MAGBIO' => 'mbi', 'MBI05_g35452_MAGBIO' => 'mbi', 'MBI07_g30179_MAGBIO' => 'mbi', 'MBI07_g35859_MAGBIO' => 'mbi', 'MBI07_g35860_MAGBIO' => 'mbi', 'MBI07_g37166_MAGBIO' => 'mbi', 'MBI08_g18172_MAGBIO' => 'mbi', 'MBI09_g08441_MAGBIO' => 'mbi', 'MBI13_g01676_MAGBIO' => 'mbi', 'MBI14_g42955_MAGBIO' => 'mbi', 'MBI16_g13161_MAGBIO' => 'mbi', 'MBI17_g27204_MAGBIO' => 'mbi', 'MBI19_g21595_MAGBIO' => 'mbi', 'MD00G1148400' => 'mdo', 'MD02G1301200' => 'mdo', 'MD03G1227800' => 'mdo', 'MD05G1041100' => 'mdo', 'MD05G1124800' => 'mdo', 'MD05G1284000' => 'mdo', 'MD05G1338800' => 'mdo', 'MD05G1338900' => 'mdo', 'MD07G1022800' => 'mdo', 'MD10G1047500' => 'mdo', 'MD10G1127500' => 'mdo', 'MD10G1262300' => 'mdo', 'MD10G1293800' => 'mdo', 'MD16G1074300' => 'mdo', 'Medtr1g021670' => 'mtr', 'Medtr1g096320' => 'mtr', 'Medtr2g013690' => 'mtr', 'Medtr2g019450' => 'mtr', 'Medtr2g085170' => 'mtr', 'Medtr4g088785' => 'mtr', 'Medtr8g055930' => 'mtr', 'Medtr8g085850' => 'mtr', 'MELO3C002605.2' => 'cme', 'MELO3C003891.2' => 'cme', 'MELO3C004012.2' => 'cme', 'MELO3C007134.2' => 'cme', 'MELO3C008118.2' => 'cme', 'MELO3C016700.2' => 'cme', 'MELO3C024127.2' => 'cme', 'MELO3C033361.2' => 'cme', 'MELO3C033362.2' => 'cme', 'Migut.C00430' => 'egut', 'Migut.C01246' => 'egut', 'Migut.E00101' => 'egut', 'Migut.H01486' => 'egut', 'Migut.H01939' => 'egut', 'Migut.K00360' => 'egut', 'Migut.M00910' => 'egut', 'Migut.M01139' => 'egut', 'Migut.N02677' => 'egut', 'MSTRG.13252' => 'ama', 'MSTRG.14701' => 'ama', 'MSTRG.1521' => 'ama', 'MSTRG.15884' => 'ama', 'MSTRG.16242' => 'ama', 'MSTRG.22285' => 'ama', 'MSTRG.22444' => 'ama', 'MSTRG.2349' => 'ama', 'MSTRG.26308' => 'ama', 'MSTRG.28296' => 'ama', 'MSTRG.9895' => 'ama', 'Nitab4.5_0000110g0060' => 'nta', 'Nitab4.5_0000420g0130' => 'nta', 'Nitab4.5_0000422g0030' => 'nta', 'Nitab4.5_0000560g0180' => 'nta', 'Nitab4.5_0000703g0100' => 'nta', 'Nitab4.5_0000786g0200' => 'nta', 'Nitab4.5_0001336g0020' => 'nta', 'Nitab4.5_0001796g0030' => 'nta', 'Nitab4.5_0003348g0060' => 'nta', 'Nitab4.5_0003698g0040' => 'nta', 'Nitab4.5_0003942g0090' => 'nta', 'Nitab4.5_0004775g0070' => 'nta', 'Nitab4.5_0004864g0030' => 'nta', 'Nitab4.5_0005615g0020' => 'nta', 'Nitab4.5_0009288g0030' => 'nta', 'Nitab4.5_0009341g0010' => 'nta', 'Nitab4.5_0009535g0010' => 'nta', 'Nn1g03995' => 'nnu', 'Nn1g04100' => 'nnu', 'Nn1g06530' => 'nnu', 'Nn3g16404' => 'nnu', 'Nn3g17212' => 'nnu', 'Nn3g20776' => 'nnu', 'Nn3g21923' => 'nnu', 'Nn5g27737' => 'nnu', 'Nn5g29461' => 'nnu', 'Nn7g38355' => 'nnu', 'Nn8g39873' => 'nnu', 'Oeu000548.2' => 'oeu', 'Oeu004672.1' => 'oeu', 'Oeu015605.2' => 'oeu', 'Oeu016092.1' => 'oeu', 'Oeu017879.3' => 'oeu', 'Oeu024910.1' => 'oeu', 'Oeu028965.1' => 'oeu', 'Oeu031269.1' => 'oeu', 'Oeu031270.1' => 'oeu', 'Oeu032535.1' => 'oeu', 'Oeu034151.1' => 'oeu', 'Oeu034152.1' => 'oeu', 'Oeu034588.2' => 'oeu', 'Oeu050846.1' => 'oeu', 'Oeu050849.2' => 'oeu', 'Oeu051063.2' => 'oeu', 'Oeu052368.1' => 'oeu', 'Oeu052370.1' => 'oeu', 'Os01g0210400' => 'osa', 'Os01g0304300' => 'osa', 'Os01g0749100' => 'osa', 'Os02g0745800' => 'osa', 'Os03g0769050' => 'osa', 'Os05g0531500' => 'osa', 'Os06g0724300' => 'osa', 'Os11g0198100' => 'osa', 'Peaxi162Scf00069g01425' => 'pax', 'Peaxi162Scf00280g00811' => 'pax', 'Peaxi162Scf00310g00615' => 'pax', 'Peaxi162Scf00362g00542' => 'pax', 'Peaxi162Scf00461g00310' => 'pax', 'Peaxi162Scf00530g00118' => 'pax', 'Peaxi162Scf00541g00057' => 'pax', 'Peaxi162Scf00661g00017' => 'pax', 'Peaxi162Scf00926g00027' => 'pax', 'Peaxi162Scf01064g00263' => 'pax', 'Peaxi162Scf01211g00135' => 'pax', 'PGR004G2336' => 'pgr', 'PGR042G0327' => 'pgr', 'PGR042G1957' => 'pgr', 'PGR042G2003' => 'pgr', 'PGR042G3929' => 'pgr', 'PGR083G1137' => 'pgr', 'PGR083G1364' => 'pgr', 'PGSC0003DMG400003381' => 'stu', 'PGSC0003DMG400003417' => 'stu', 'PGSC0003DMG400008981' => 'stu', 'PGSC0003DMG400012417' => 'stu', 'PGSC0003DMG400012823' => 'stu', 'PGSC0003DMG400016885' => 'stu', 'PGSC0003DMG400022812' => 'stu', 'PGSC0003DMG400029726' => 'stu', 'PGSC0003DMG401009243' => 'stu', 'PGSC0003DMG401031505' => 'stu', 'PGSC0003DMG402031505' => 'stu', 'Phvul.001G017600' => 'pvu', 'Phvul.002G193500' => 'pvu', 'Phvul.002G228900' => 'pvu', 'Phvul.002G236800' => 'pvu', 'Phvul.003G049500' => 'pvu', 'Phvul.005G072000' => 'pvu', 'Phvul.006G164800' => 'pvu', 'Phvul.006G185100' => 'pvu', 'Phvul.007G090000' => 'pvu', 'Potri.001G399800' => 'ptr', 'Potri.002G149900' => 'ptr', 'Potri.004G044100' => 'ptr', 'Potri.004G177600' => 'ptr', 'Potri.009G138000' => 'ptr', 'Potri.010G094000' => 'ptr', 'Potri.011G053000' => 'ptr', 'Potri.011G119300' => 'ptr', 'Potri.013G113700' => 'ptr', 'Potri.018G107800' => 'ptr', 'Potri.019G084100' => 'ptr', 'Pp3c14_23720' => 'ppa', 'Pp3c16_6340' => 'ppa', 'Pp3c23_13420' => 'ppa', 'Pp3c24_2740' => 'ppa', 'Pp3c25_860' => 'ppa', 'Pp3c8_21750' => 'ppa', 'Prupe.1G273000' => 'ppe', 'Prupe.1G273700' => 'ppe', 'Prupe.1G274100' => 'ppe', 'Prupe.2G023300' => 'ppe', 'Prupe.4G048000' => 'ppe', 'Prupe.4G080400' => 'ppe', 'Prupe.4G181200' => 'ppe', 'Prupe.8G056900' => 'ppe', 'Prupe.8G168700' => 'ppe', 'Psat1g189080' => 'psa', 'Psat1g204760' => 'psa', 'Psat4g175560' => 'psa', 'Psat4g177720' => 'psa', 'Psat5g244240' => 'psa', 'Psat6g010720' => 'psa', 'Psat6g187200' => 'psa', 'Psat7g072040' => 'psa', 'PSO017G3501' => 'pso', 'PSO063G2148' => 'pso', 'PSO063G5608' => 'pso', 'PSO210G6392' => 'pso', 'PSO541G2319' => 'pso', 'PSO541G2836' => 'pso', 'PSO541G4012' => 'pso', 'PSO541G6253' => 'pso', 'PSO675G0580' => 'pso', 'PSO675G0856' => 'pso', 'PSO675G5635' => 'pso', 'PSO675G9157' => 'pso', 'PSO832G1660' => 'pso', 'PSO832G1969' => 'pso', 'QL02p007186' => 'qlo', 'QL02p033904' => 'qlo', 'QL03p064391' => 'qlo', 'QL05p040593' => 'qlo', 'QL05p058242' => 'qlo', 'QL08p021825' => 'qlo', 'QL11p004981' => 'qlo', 'RcHm_v2.0_Chr1g0318301' => 'rch', 'RcHm_v2.0_Chr4g0418501' => 'rch', 'RcHm_v2.0_Chr4g0439971' => 'rch', 'RcHm_v2.0_Chr5g0008541' => 'rch', 'RcHm_v2.0_Chr5g0014101' => 'rch', 'RcHm_v2.0_Chr5g0014131' => 'rch', 'RcHm_v2.0_Chr5g0033621' => 'rch', 'RcHm_v2.0_Chr6g0272041' => 'rch', 'RcHm_v2.0_Chr6g0278831' => 'rch', 'Rhsim02G0130400' => 'rsi', 'Rhsim02G0171100' => 'rsi', 'Rhsim05G0053000' => 'rsi', 'Rhsim05G0053100' => 'rsi', 'Rhsim06G0096500' => 'rsi', 'Rhsim06G0096600' => 'rsi', 'Rhsim06G0199100' => 'rsi', 'Rhsim12G0062300' => 'rsi', 'Rhsim12G0062800' => 'rsi', 'Sabra02G0118600' => 'sbr', 'Sabra04G0027300' => 'sbr', 'Sabra04G0119500' => 'sbr', 'Sabra08G0112500' => 'sbr', 'Sabra11G0036800' => 'sbr', 'Sabra11G0103800' => 'sbr', 'Sabra13G0096300' => 'sbr', 'Sabra16G0262300' => 'sbr', 'Sabra18G0091700' => 'sbr', 'Sabra19G0095400' => 'sbr', 'SalBow6G3080' => 'sbo', 'SalBow7G1157' => 'sbo', 'SalBow7G2123' => 'sbo', 'SalBow7G2285' => 'sbo', 'SalBow7G3537' => 'sbo', 'SalBow8G2947' => 'sbo', 'SalBow8G4463' => 'sbo', 'SalBow8G5466' => 'sbo', 'Sc01g0001750' => 'sci', 'Sc02g0006640' => 'sci', 'Sc02g0006670' => 'sci', 'Sc04g0008220' => 'sci', 'Sc05g0006190' => 'sci', 'Sc08g0002760' => 'sci', 'Sc17g0006170' => 'sci', 'Sc22g0002050' => 'sci', 'Sc23g0001190' => 'sci', 'Sc24g0000980' => 'sci', 'Sed0006245' => 'sed', 'Sed0007543' => 'sed', 'Sed0009411' => 'sed', 'Sed0010765' => 'sed', 'Sed0012944' => 'sed', 'Sed0014682' => 'sed', 'Sed0016174' => 'sed', 'Sed0016796' => 'sed', 'Sed0020317' => 'sed', 'Sed0021467' => 'sed', 'SEGI_01316' => 'sgi', 'SEGI_03374' => 'sgi', 'SEGI_16265' => 'sgi', 'SEGI_18569' => 'sgi', 'SEGI_20351' => 'sgi', 'SEGI_26395' => 'sgi', 'SEGI_29469' => 'sgi', 'SEGI_34771' => 'sgi', 'SEGI_36769' => 'sgi', 'SEGI_37139' => 'sgi', 'SGA_v2.0_scaffold100G29687' => 'sas', 'SGA_v2.0_scaffold118G32472' => 'sas', 'SGA_v2.0_scaffold14G07051' => 'sas', 'SGA_v2.0_scaffold183G39845' => 'sas', 'SGA_v2.0_scaffold1G00174' => 'sas', 'SGA_v2.0_scaffold22G09714' => 'sas', 'SGA_v2.0_scaffold333G48992' => 'sas', 'SGA_v2.0_scaffold46G17491' => 'sas', 'SGA_v2.0_scaffold49G18294' => 'sas', 'SGA_v2.0_scaffold63G21658' => 'sas', 'SHI01741' => 'shi', 'SHI05771' => 'shi', 'SHI18077' => 'shi', 'SHI20525' => 'shi', 'SHI20527' => 'shi', 'SHI20528' => 'shi', 'SMO172G0185' => 'smo', 'SMO198G0020' => 'smo', 'SMO351G0006' => 'smo', 'SMO356G0118' => 'smo', 'SMO358G0296' => 'smo', 'SMO367G0079' => 'smo', 'SMO367G1277' => 'smo', 'Solyc01g014220.3' => 'sly', 'Solyc01g111770.2' => 'sly', 'Solyc02g078180.3' => 'sly', 'Solyc03g006430.3' => 'sly', 'Solyc03g006456.1' => 'sly', 'Solyc03g079860.2' => 'sly', 'Solyc04g079770.3' => 'sly', 'Solyc05g007430.4' => 'sly', 'Solyc07g063150.3' => 'sly', 'Solyc08g016620.3' => 'sly', 'Solyc09g057590.3' => 'sly', 'Solyc09g057600.1' => 'sly', 'Solyc10g009050.3' => 'sly', 'Solyc11g017420.2' => 'sly', 'Sopen01g053810' => 'spe', 'Sopen02g023040' => 'spe', 'Sopen03g002440' => 'spe', 'Sopen04g033350' => 'spe', 'Sopen05g003310' => 'spe', 'Sopen07g004050' => 'spe', 'Sopen07g031340' => 'spe', 'Sopen08g006990' => 'spe', 'Sopen10g004830' => 'spe', 'Sopen11g009370' => 'spe', 'Sp1g24450' => 'spa', 'Sp1g29670' => 'spa', 'Sp1g39600' => 'spa', 'Sp2g11080' => 'spa', 'Sp2g13970' => 'spa', 'Sp4g16130' => 'spa', 'Sp6g13080' => 'spa', 'Sp7g37270' => 'spa', 'TAR371G0065' => 'tar', 'TAR376G0340' => 'tar', 'TAR376G0435' => 'tar', 'TAR381G0002' => 'tar', 'TAR381G1236' => 'tar', 'TAR624G0055' => 'tar', 'TAR624G0324' => 'tar', 'TAR624G0696' => 'tar', 'TAR624G0906' => 'tar', 'TAR625G0107' => 'tar', 'TAR626G0015' => 'tar', 'TAR626G1356' => 'tar', 'TAR627G0888' => 'tar', 'TAR628G0399' => 'tar', 'TAR628G1327' => 'tar', 'TAR629G2831' => 'tar', 'TAR629G2874' => 'tar', 'TAR633G1432' => 'tar', 'TAR633G2771' => 'tar', 'THA.LOC104803394' => 'tha', 'THA.LOC104805153' => 'tha', 'THA.LOC104806784' => 'tha', 'THA.LOC104810473' => 'tha', 'THA.LOC104813100' => 'tha', 'THA.LOC104814215' => 'tha', 'THA.LOC104815554' => 'tha', 'THA.LOC104820544' => 'tha', 'THA.LOC104824754' => 'tha', 'THA.LOC104827717' => 'tha', 'Thecc.02G031400' => 'tca', 'Thecc.02G055900' => 'tca', 'Thecc.02G350800' => 'tca', 'Thecc.06G150900' => 'tca', 'Thecc.06G186600' => 'tca', 'Thecc.07G089600' => 'tca', 'Thecc.08G020400' => 'tca', 'Thecc.08G182100' => 'tca', 'Thhalv10000873m.g' => 'esa', 'Thhalv10004185m.g' => 'esa', 'Thhalv10006981m.g' => 'esa', 'Thhalv10007204m.g' => 'esa', 'Thhalv10011374m.g' => 'esa', 'Thhalv10013482m.g' => 'esa', 'Thhalv10017801m.g' => 'esa', 'Thhalv10024983m.g' => 'esa', 'TPR.G12072' => 'tpr', 'TPR.G15769' => 'tpr', 'TPR.G16504' => 'tpr', 'TPR.G16506' => 'tpr', 'TPR.G24345' => 'tpr', 'TPR.G26666' => 'tpr', 'TPR.G27320' => 'tpr', 'TPR.G31819' => 'tpr', 'TPR.G38879' => 'tpr', 'TPR.G39015' => 'tpr', 'TPR.G8819' => 'tpr', 'TWI09G0924' => 'twi', 'TWI12G0811' => 'twi', 'TWI12G1294' => 'twi', 'TWI31G0150' => 'twi', 'TWI36G1262' => 'twi', 'TWI38G1287' => 'twi', 'TWI38G1633' => 'twi', 'TWI38G1982' => 'twi', 'TWI39G0116' => 'twi', 'TWI60G1011' => 'twi', 'TWI63G0171' => 'twi', 'TWI73G0839' => 'twi', 'TWI79G1511' => 'twi', 'unitig_0.g915' => 'ugi', 'unitig_0.g916' => 'ugi', 'unitig_21.g20219' => 'ugi', 'unitig_21.g20416' => 'ugi', 'unitig_578.g16132' => 'ugi', 'unitig_578.g16718' => 'ugi', 'unitig_62.g23481' => 'ugi', 'unitig_744.g24535' => 'ugi', 'unitig_749.g13525' => 'ugi', 'vmacro01248' => 'vma', 'vmacro02290' => 'vma', 'vmacro10946' => 'vma', 'vmacro11865' => 'vma', 'vmacro12493' => 'vma', 'vmacro17322' => 'vma', 'vmacro21599' => 'vma', 'vmacro23041' => 'vma', 'VMungo0251G0004' => 'vmu', 'VMungo0251G2639' => 'vmu', 'VMungo0251G2967' => 'vmu', 'VMungo0540G0864' => 'vmu', 'VMungo0540G1569' => 'vmu', 'VMungo0647G0317' => 'vmu', 'VMungo0720G1373' => 'vmu', 'VMungo0720G1508' => 'vmu', 'VMungo1080G0485' => 'vmu', 'VMungo1215G3177' => 'vmu', 'Zm00001eb112600' => 'zma', 'Zm00001eb120220' => 'zma', 'Zm00001eb153240' => 'zma', 'Zm00001eb168880' => 'zma', 'Zm00001eb213920' => 'zma', 'Zm00001eb228280' => 'zma', 'Zm00001eb254580' => 'zma', 'Zm00001eb272180' => 'zma', 'Zm00001eb293190' => 'zma', 'Zm00001eb322930' => 'zma', 'Zm00001eb353360' => 'zma', 'Zm00001eb353390' => 'zma', 'Zm00001eb353430' => 'zma', 'Zm00001eb353440' => 'zma', 'Zm00001eb353780' => 'zma' ), 'gf_id' => 'HOM05D000499', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000499' ), 'data_identifier' => 'HOM05D000499', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000499', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1066', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p29780' => 'bna', 'A02p33180' => 'bna', 'A03p16470' => 'bna', 'A03p66010' => 'bna', 'A04p25970' => 'bna', 'A06p01270' => 'bna', 'A06p46080' => 'bna', 'A07p11400' => 'bna', 'A08p01840' => 'bna', 'A08p08230' => 'bna', 'A08p25740' => 'bna', 'A09p32070' => 'bna', 'A09p37830' => 'bna', 'A09p42840' => 'bna', 'A09p42850' => 'bna', 'Aa31LG10G2060' => 'aar', 'Aa31LG2G7410' => 'aar', 'Aa31LG6G10200' => 'aar', 'Aa31LG6G16680' => 'aar', 'Aa31LG6G8470' => 'aar', 'Aa31LG9G12730' => 'aar', 'Aa31LG9G13680' => 'aar', 'Aa31LG9G14920' => 'aar', 'Aa31LG9G6650' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4977' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5467' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3254' => 'aag', 'Actinidia02578' => 'ach', 'Actinidia07693' => 'ach', 'Actinidia08413' => 'ach', 'Actinidia08414' => 'ach', 'Actinidia15289' => 'ach', 'Actinidia19871' => 'ach', 'Actinidia21475' => 'ach', 'Actinidia22576' => 'ach', 'Actinidia28327' => 'ach', 'Actinidia32491' => 'ach', 'Actinidia39463' => 'ach', 'Actinidia39571' => 'ach', 'Ah.01g013750' => 'amhyb', 'Ah.01g023210' => 'amhyb', 'Ah.04g164850' => 'amhyb', 'Ah.05g178060' => 'amhyb', 'Ah.07g204270' => 'amhyb', 'Ah.07g208480' => 'amhyb', 'Ah.09g237410' => 'amhyb', 'Ah.14g089460' => 'amhyb', 'AL1G41790' => 'aly', 'AL1G49050' => 'aly', 'AL1G53810' => 'aly', 'AL1G61400' => 'aly', 'AL4G18580' => 'aly', 'AL5G12510' => 'aly', 'AL5G12540' => 'aly', 'AL6G43230' => 'aly', 'AL7G10370' => 'aly', 'AL7G19250' => 'aly', 'AL8G12240' => 'aly', 'AL8G18540' => 'aly', 'Aqoxy1G02409' => 'aox', 'Aqoxy2G03993' => 'aox', 'Aqoxy3G03357' => 'aox', 'Aqoxy4G00785' => 'aox', 'Aqoxy5G02598' => 'aox', 'Aqoxy6G00132' => 'aox', 'Aqoxy7G01776' => 'aox', 'Aqoxy7G02316' => 'aox', 'Aqoxy7G03973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.12AFKW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B8730' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27IQR1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3F75VG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3RE0GA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41TCQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.527VTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FIR39' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5W8UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DA38EV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ63HS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H1I32C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HC27T5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4M8AP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7N3CZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9UVDZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LS1NQA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT1D4B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SKC4TM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCFV76' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF9Q1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQWD9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1ZM88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WE07RT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YCK7VH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJE6Q6' => 'arhy', 'AT1G28240' => 'ath', 'AT1G34550' => 'ath', 'AT1G53040' => 'ath', 'AT2G02910' => 'ath', 'AT4G09630' => 'ath', 'AT4G38500' => 'ath', 'AT5G42660' => 'ath', 'AT5G46220' => 'ath', 'ATR0152G026' => 'atr', 'ATR0564G343' => 'atr', 'ATR0706G151' => 'atr', 'ATR0733G207' => 'atr', 'ATR0751G234' => 'atr', 'ATR0807G048' => 'atr', 'ATR1091G084' => 'atr', 'Atru.chr10.1229' => 'acertr', 'Atru.chr10.1230' => 'acertr', 'Atru.chr10.1874' => 'acertr', 'Atru.chr11.1808' => 'acertr', 'Atru.chr13.1795' => 'acertr', 'Atru.chr13.570' => 'acertr', 'Atru.chr2.2608' => 'acertr', 'Atru.chr2.2609' => 'acertr', 'Atru.chr5.3428' => 'acertr', 'Atru.chr8.1171' => 'acertr', 'AUR62004651' => 'cqu', 'AUR62008675' => 'cqu', 'AUR62010014' => 'cqu', 'AUR62013004' => 'cqu', 'AUR62014825' => 'cqu', 'AUR62015015' => 'cqu', 'AUR62015151' => 'cqu', 'AUR62017020' => 'cqu', 'AUR62019422' => 'cqu', 'AUR62023570' => 'cqu', 'AUR62025571' => 'cqu', 'AUR62029098' => 'cqu', 'AUR62033863' => 'cqu', 'AUR62034296' => 'cqu', 'AUR62040075' => 'cqu', 'BcaB02g07334' => 'bca', 'BcaB02g10575' => 'bca', 'BcaB03g12119' => 'bca', 'BcaB03g12120' => 'bca', 'BcaB03g13945' => 'bca', 'BcaB04g17123' => 'bca', 'BcaB04g17867' => 'bca', 'BcaB04g19839' => 'bca', 'BcaB07g30317' => 'bca', 'BcaB07g32432' => 'bca', 'BcaB07g33362' => 'bca', 'BcaB08g36611' => 'bca', 'BcaC01g00028' => 'bca', 'BcaC01g01356' => 'bca', 'BcaC01g02034' => 'bca', 'BcaC01g06051' => 'bca', 'BcaC03g16839' => 'bca', 'BcaC03g17176' => 'bca', 'BcaC05g26829' => 'bca', 'BcaC06g31490' => 'bca', 'BcaC06g35344' => 'bca', 'BcaC06g36570' => 'bca', 'BcaC07g37537' => 'bca', 'BcaC08g43491' => 'bca', 'BcaC08g43773' => 'bca', 'BcaNung00234' => 'bca', 'BcaNung01982' => 'bca', 'BcaNung03707' => 'bca', 'BcaNung06454' => 'bca', 'BolC2t10762H' => 'bol', 'BolC2t11191H' => 'bol', 'BolC3t14322H' => 'bol', 'BolC3t19747H' => 'bol', 'BolC3t21425H' => 'bol', 'BolC4t27800H' => 'bol', 'BolC5t31423H' => 'bol', 'BolC6t35951H' => 'bol', 'BolC6t36282H' => 'bol', 'BolC7t40678H' => 'bol', 'BolC7t40679H' => 'bol', 'BolC7t42222H' => 'bol', 'BolC7t43492H' => 'bol', 'BolC7t46785H' => 'bol', 'BolC8t47853H' => 'bol', 'BolC9t56805H' => 'bol', 'BraA02t08000Z' => 'bra', 'BraA02t08341Z' => 'bra', 'BraA03t10936Z' => 'bra', 'BraA03t15657Z' => 'bra', 'BraA04t18100Z' => 'bra', 'BraA05t20523Z' => 'bra', 'BraA06t23353Z' => 'bra', 'BraA06t27473Z' => 'bra', 'BraA06t27769Z' => 'bra', 'BraA07t28928Z' => 'bra', 'BraA08t32236Z' => 'bra', 'BraA08t32841Z' => 'bra', 'BraA08t34524Z' => 'bra', 'BraA09t38742Z' => 'bra', 'BraA09t39295Z' => 'bra', 'C02p47180' => 'bna', 'C02p50990' => 'bna', 'C03p19360' => 'bna', 'C03p74950' => 'bna', 'C03p91000' => 'bna', 'C04p63260' => 'bna', 'C05p27050' => 'bna', 'C06p08750' => 'bna', 'C06p11490' => 'bna', 'C07p02820' => 'bna', 'C07p17180' => 'bna', 'C07p29440' => 'bna', 'C07p63730' => 'bna', 'C09p39260' => 'bna', 'CAN.G1164.34' => 'can', 'CAN.G1164.39' => 'can', 'CAN.G1530.3' => 'can', 'CAN.G162.61' => 'can', 'CAN.G176.6' => 'can', 'CAN.G289.49' => 'can', 'CAN.G370.21' => 'can', 'CAN.G370.22' => 'can', 'CAN.G371.117' => 'can', 'CAN.G58.37' => 'can', 'CAN.G588.98' => 'can', 'CANSAT21G2266' => 'cansat', 'CANSAT25G2799' => 'cansat', 'CANSAT35G0862' => 'cansat', 'CANSAT35G1704' => 'cansat', 'CANSAT35G1760' => 'cansat', 'CANSAT56G3971' => 'cansat', 'CANSAT56G4116' => 'cansat', 'CANSAT80G1259' => 'cansat', 'CARHR027730' => 'chi', 'CARHR033880' => 'chi', 'CARHR043270' => 'chi', 'CARHR145330' => 'chi', 'CARHR145340' => 'chi', 'CARHR175570' => 'chi', 'CARHR181570' => 'chi', 'CARHR258470' => 'chi', 'CARHR260490' => 'chi', 'CARHR294220' => 'chi', 'Carub.0001s2668' => 'cru', 'Carub.0001s3257' => 'cru', 'Carub.0001s4220' => 'cru', 'Carub.0005s0179' => 'cru', 'Carub.0006s2807' => 'cru', 'Carub.0007s0039' => 'cru', 'Carub.0008s0169' => 'cru', 'Carub.0008s0636' => 'cru', 'Ca_00338_v3' => 'car', 'Ca_00542_v3' => 'car', 'Ca_01844_v3' => 'car', 'Ca_10611_v3' => 'car', 'Ca_13326_v3' => 'car', 'Ca_17944_v3' => 'car', 'Ca_18546_v3' => 'car', 'Ca_24219_v3' => 'car', 'Ca_29972_v3' => 'car', 'CBR_g3681' => 'cbr', 'CBR_g40021' => 'cbr', 'Cc01_g08140' => 'ccan', 'Cc02_g13410' => 'ccan', 'Cc02_g37480' => 'ccan', 'Cc05_g12030' => 'ccan', 'Cc09_g03370' => 'ccan', 'Cc09_g10300' => 'ccan', 'Cc10_g03530' => 'ccan', 'Cc10_g11380' => 'ccan', 'CDE01G0176' => 'cde', 'CDE02G0675' => 'cde', 'CDE02G0942' => 'cde', 'CDE02G1153' => 'cde', 'CDE02G4177' => 'cde', 'CDE04G2117' => 'cde', 'CDE04G2736' => 'cde', 'CDE08G1161' => 'cde', 'CDE09G1238' => 'cde', 'Cfa000467' => 'cfa', 'Cfa000947' => 'cfa', 'Cfa004969' => 'cfa', 'Cfa005284' => 'cfa', 'Cfa008993' => 'cfa', 'Cfa018187' => 'cfa', 'Cfa018454' => 'cfa', 'Cfa020585' => 'cfa', 'Ciclev10000424m.g' => 'ccl', 'Ciclev10003605m.g' => 'ccl', 'Ciclev10007828m.g' => 'ccl', 'Ciclev10014620m.g' => 'ccl', 'Ciclev10015169m.g' => 'ccl', 'Ciclev10018291m.g' => 'ccl', 'Ciclev10028256m.g' => 'ccl', 'Ciclev10033822m.g' => 'ccl', 'CiPaw.05G060300' => 'cil', 'CiPaw.05G085000' => 'cil', 'CiPaw.06G083700' => 'cil', 'CiPaw.06G120300' => 'cil', 'CiPaw.09G060500' => 'cil', 'CiPaw.09G123800' => 'cil', 'CiPaw.11G169700' => 'cil', 'CiPaw.12G118300' => 'cil', 'CiPaw.15G071000' => 'cil', 'CiPaw.15G081900' => 'cil', 'ClCG01G024610' => 'cla', 'ClCG03G006070' => 'cla', 'ClCG05G019250' => 'cla', 'ClCG09G009500' => 'cla', 'ClCG11G008200' => 'cla', 'ClCG11G018080' => 'cla', 'COL.COLO4_17373' => 'col', 'COL.COLO4_22994' => 'col', 'COL.COLO4_26389' => 'col', 'COL.COLO4_27170' => 'col', 'COL.COLO4_31074' => 'col', 'COL.COLO4_31465' => 'col', 'COL.COLO4_36438' => 'col', 'COL.COLO4_36439' => 'col', 'Cpa.g.c38781' => 'cpa', 'Cpa.g.sc128.12' => 'cpa', 'Cpa.g.sc166.7' => 'cpa', 'Cpa.g.sc166.8' => 'cpa', 'Cpa.g.sc20.111' => 'cpa', 'Cpa.g.sc27.31' => 'cpa', 'Cpa.g.sc64.36' => 'cpa', 'Cpa.g.sc64.37' => 'cpa', 'Cpa.g.sc66.49' => 'cpa', 'Cpa.g.sc80.64' => 'cpa', 'CsaV3_1G012320' => 'csa', 'CsaV3_2G008480' => 'csa', 'CsaV3_2G033450' => 'csa', 'CsaV3_3G044830' => 'csa', 'CsaV3_4G033710' => 'csa', 'CsaV3_6G051730' => 'csa', 'CsaV3_7G025350' => 'csa', 'CSS0001067' => 'camsi', 'CSS0005996' => 'camsi', 'CSS0006590' => 'camsi', 'CSS0009673' => 'camsi', 'CSS0010201' => 'camsi', 'CSS0010549' => 'camsi', 'CSS0011364' => 'camsi', 'CSS0014473' => 'camsi', 'CSS0014961' => 'camsi', 'CSS0020191' => 'camsi', 'CSS0021165' => 'camsi', 'CSS0022306' => 'camsi', 'CSS0030591' => 'camsi', 'CSS0030696' => 'camsi', 'CSS0032653' => 'camsi', 'CSS0037487' => 'camsi', 'CSS0041102' => 'camsi', 'CSS0041261' => 'camsi', 'CSS0046246' => 'camsi', 'CSS0049256' => 'camsi', 'DCAR_004075' => 'dca', 'DCAR_011538' => 'dca', 'DCAR_019553' => 'dca', 'DCAR_020952' => 'dca', 'DCAR_021739' => 'dca', 'DCAR_027407' => 'dca', 'DCAR_027913' => 'dca', 'DCAR_028066' => 'dca', 'Dinv05899' => 'din', 'Dinv07563' => 'din', 'Dinv08010' => 'din', 'Dinv14125' => 'din', 'Dinv20172' => 'din', 'Dinv30743' => 'din', 'Dinv31229' => 'din', 'Dinv34162' => 'din', 'Dinv36028' => 'din', 'Dinv39368' => 'din', 'Dinv40565' => 'din', 'Dinv41706' => 'din', 'Duzib052G0089' => 'dzi', 'Duzib116G0641' => 'dzi', 'Duzib132G0069' => 'dzi', 'Duzib132G1219' => 'dzi', 'Duzib147G0278' => 'dzi', 'Duzib160G0480' => 'dzi', 'Duzib170G0661' => 'dzi', 'Duzib177G0591' => 'dzi', 'Duzib187G1353' => 'dzi', 'Duzib192G0858' => 'dzi', 'Duzib192G0883' => 'dzi', 'Duzib213G0506' => 'dzi', 'Duzib235G0289' => 'dzi', 'Duzib251G0422' => 'dzi', 'ECA232G3898' => 'eca', 'ECA233G5950' => 'eca', 'ECA234G1699' => 'eca', 'ECA234G2421' => 'eca', 'ECA236G0426' => 'eca', 'ECA236G4331' => 'eca', 'ECA248G2573' => 'eca', 'EL10Ac1g00077' => 'bvu', 'EL10Ac1g01746' => 'bvu', 'EL10Ac2g03464' => 'bvu', 'EL10Ac4g08176' => 'bvu', 'EL10Ac7g17521' => 'bvu', 'EL10Ac8g20386' => 'bvu', 'EL10Ac9g21343' => 'bvu', 'EL10Ac9g22688' => 'bvu', 'Eucgr.B03434' => 'egr', 'Eucgr.D00618' => 'egr', 'Eucgr.E02395' => 'egr', 'Eucgr.F01129' => 'egr', 'Eucgr.F02622' => 'egr', 'Eucgr.F04207' => 'egr', 'FAN01G0570' => 'fan', 'FAN03G3351' => 'fan', 'FAN06G3702' => 'fan', 'FAN07G2149' => 'fan', 'FAN10G3758' => 'fan', 'FAN11G1170' => 'fan', 'FAN11G2050' => 'fan', 'FAN11G2724' => 'fan', 'FAN12G1700' => 'fan', 'FAN12G2028' => 'fan', 'FAN15G1160' => 'fan', 'FAN15G3063' => 'fan', 'FAN16G2540' => 'fan', 'FAN16G3077' => 'fan', 'FAN16G3624' => 'fan', 'FAN17G0221' => 'fan', 'FAN20G2492' => 'fan', 'FAN20G2905' => 'fan', 'FAN21G0548' => 'fan', 'FAN21G1300' => 'fan', 'FAN22G0077' => 'fan', 'FAN22G1315' => 'fan', 'FAN24G1280' => 'fan', 'FAN24G1445' => 'fan', 'FAN24G3527' => 'fan', 'FAN25G0464' => 'fan', 'FAN25G2885' => 'fan', 'FAN25G3270' => 'fan', 'FAN27G1101' => 'fan', 'FAN27G2846' => 'fan', 'FAN27G3524' => 'fan', 'FvH4_2g11770' => 'fve', 'FvH4_2g15630' => 'fve', 'FvH4_3g05570' => 'fve', 'FvH4_3g09110' => 'fve', 'FvH4_3g19940' => 'fve', 'FvH4_4g04821' => 'fve', 'FvH4_4g31480' => 'fve', 'FvH4_7g01740' => 'fve', 'Glyma.05G130400' => 'gma', 'Glyma.05G156400' => 'gma', 'Glyma.07G197000' => 'gma', 'Glyma.08G085151' => 'gma', 'Glyma.08G114500' => 'gma', 'Glyma.08G300400' => 'gma', 'Glyma.10G215800' => 'gma', 'Glyma.12G224400' => 'gma', 'Glyma.13G179300' => 'gma', 'Glyma.13G218151' => 'gma', 'Glyma.13G238800' => 'gma', 'Glyma.13G276900' => 'gma', 'Glyma.14G078200' => 'gma', 'Glyma.15G074500' => 'gma', 'Glyma.15G094100' => 'gma', 'Glyma.17G247200' => 'gma', 'Glyma.18G120100' => 'gma', 'Glyma.20G176000' => 'gma', 'Gohir.A01G063600' => 'ghi', 'Gohir.A01G170301' => 'ghi', 'Gohir.A02G060500' => 'ghi', 'Gohir.A05G133850' => 'ghi', 'Gohir.A05G161400' => 'ghi', 'Gohir.A06G012900' => 'ghi', 'Gohir.A06G035901' => 'ghi', 'Gohir.A06G127100' => 'ghi', 'Gohir.A06G210500' => 'ghi', 'Gohir.A08G008650' => 'ghi', 'Gohir.A09G072700' => 'ghi', 'Gohir.A09G088301' => 'ghi', 'Gohir.A10G040600' => 'ghi', 'Gohir.A12G036300' => 'ghi', 'Gohir.A12G143350' => 'ghi', 'Gohir.A12G165500' => 'ghi', 'Gohir.A13G145700' => 'ghi', 'Gohir.D01G050000' => 'ghi', 'Gohir.D01G051366' => 'ghi', 'Gohir.D01G161350' => 'ghi', 'Gohir.D02G065900' => 'ghi', 'Gohir.D05G164200' => 'ghi', 'Gohir.D05G355500' => 'ghi', 'Gohir.D06G010400' => 'ghi', 'Gohir.D06G111250' => 'ghi', 'Gohir.D06G132000' => 'ghi', 'Gohir.D06G210500' => 'ghi', 'Gohir.D07G165675' => 'ghi', 'Gohir.D08G062240' => 'ghi', 'Gohir.D08G086101' => 'ghi', 'Gohir.D08G138060' => 'ghi', 'Gohir.D09G072300' => 'ghi', 'Gohir.D10G041400' => 'ghi', 'Gohir.D11G191020' => 'ghi', 'Gohir.D11G212066' => 'ghi', 'Gohir.D12G036300' => 'ghi', 'Gohir.D12G168600' => 'ghi', 'Gohir.D13G150600' => 'ghi', 'Gorai.001G057300' => 'gra', 'Gorai.002G069900' => 'gra', 'Gorai.002G200000' => 'gra', 'Gorai.003G067600' => 'gra', 'Gorai.005G074800' => 'gra', 'Gorai.006G087300' => 'gra', 'Gorai.008G037500' => 'gra', 'Gorai.008G181400' => 'gra', 'Gorai.009G169400' => 'gra', 'Gorai.009G387900' => 'gra', 'Gorai.010G013300' => 'gra', 'Gorai.010G153800' => 'gra', 'Gorai.010G255800' => 'gra', 'Gorai.011G043700' => 'gra', 'Gorai.011G198900' => 'gra', 'Gorai.013G168400' => 'gra', 'GSVIVG01005212001' => 'vvi', 'GSVIVG01006163001' => 'vvi', 'GSVIVG01009625001' => 'vvi', 'GSVIVG01014338001' => 'vvi', 'GSVIVG01020005001' => 'vvi', 'GSVIVG01021450001' => 'vvi', 'GSVIVG01023975001' => 'vvi', 'GSVIVG01034490001' => 'vvi', 'HanXRQChr04g0112071' => 'han', 'HanXRQChr05g0131151' => 'han', 'HanXRQChr09g0262371' => 'han', 'HanXRQChr09g0268401' => 'han', 'HanXRQChr10g0279241' => 'han', 'HanXRQChr10g0297961' => 'han', 'HanXRQChr11g0326231' => 'han', 'HanXRQChr11g0328471' => 'han', 'HanXRQChr16g0507941' => 'han', 'HanXRQChr17g0560211' => 'han', 'Haze_02108' => 'cav', 'Haze_02428' => 'cav', 'Haze_05593' => 'cav', 'Haze_06448' => 'cav', 'Haze_09427' => 'cav', 'Haze_12022' => 'cav', 'Haze_17612' => 'cav', 'Haze_17928' => 'cav', 'Hma1.2p1_0032F.1_g019250' => 'hma', 'Hma1.2p1_0163F.1_g072690' => 'hma', 'Hma1.2p1_0265F.1_g106710' => 'hma', 'Hma1.2p1_0286F.1_g113970' => 'hma', 'Hma1.2p1_0363F.1_g136640' => 'hma', 'Hma1.2p1_0584F.1_g183470' => 'hma', 'Hma1.2p1_0885F.1_g232570' => 'hma', 'HPP92_006022' => 'vpl', 'HPP92_007320' => 'vpl', 'HPP92_011521' => 'vpl', 'HPP92_019387' => 'vpl', 'HPP92_024038' => 'vpl', 'Hund05891' => 'sun', 'Hund06450' => 'sun', 'Hund12053' => 'sun', 'Hund16800' => 'sun', 'Hund21222' => 'sun', 'Hund22896' => 'sun', 'Hund23746' => 'sun', 'Hund27083' => 'sun', 'Lalb_Chr02g0141831' => 'lal', 'Lalb_Chr02g0141841' => 'lal', 'Lalb_Chr05g0220411' => 'lal', 'Lalb_Chr06g0162081' => 'lal', 'Lalb_Chr09g0327651' => 'lal', 'Lalb_Chr13g0295051' => 'lal', 'Lalb_Chr15g0086801' => 'lal', 'Lalb_Chr16g0383781' => 'lal', 'Lalb_Chr16g0383791' => 'lal', 'Lalb_Chr18g0055441' => 'lal', 'Lalb_Chr18g0059611' => 'lal', 'Lalb_Chr20g0109661' => 'lal', 'Lalb_Chr20g0109831' => 'lal', 'Lalb_Chr20g0121871' => 'lal', 'Lalb_Chr22g0355361' => 'lal', 'Lalb_Chr25g0286371' => 'lal', 'Lj1A1187G43' => 'lonja', 'Lj1A1205T50' => 'lonja', 'Lj1A800G33' => 'lonja', 'Lj1C1187T7' => 'lonja', 'Lj1C843T11' => 'lonja', 'Lj1g0010940' => 'lja', 'Lj2A288T69' => 'lonja', 'Lj3g0024276' => 'lja', 'Lj4A47T76' => 'lonja', 'Lj4g0005805' => 'lja', 'Lj4g0006097' => 'lja', 'Lj4g0008528' => 'lja', 'Lj4g0024907' => 'lja', 'Lj5g0012472' => 'lja', 'Lj5g0018648' => 'lja', 'Lj6C789G1' => 'lonja', 'Lj6g0004000' => 'lja', 'Lj7A292G67' => 'lonja', 'Lj7A292T64' => 'lonja', 'Lj9A400T58' => 'lonja', 'Lsat_1_v5_gn_1_126181' => 'lsa', 'Lsat_1_v5_gn_4_123041' => 'lsa', 'Lsat_1_v5_gn_4_133620' => 'lsa', 'Lsat_1_v5_gn_4_53221' => 'lsa', 'Lsat_1_v5_gn_4_71961' => 'lsa', 'Lsat_1_v5_gn_7_105241' => 'lsa', 'Lsat_1_v5_gn_7_21361' => 'lsa', 'Lsat_1_v5_gn_7_28860' => 'lsa', 'Lsat_1_v5_gn_7_31260' => 'lsa', 'Lsat_1_v5_gn_8_52801' => 'lsa', 'Manes.02G191400' => 'mes', 'Manes.03G110100' => 'mes', 'Manes.04G071100' => 'mes', 'Manes.05G100500' => 'mes', 'Manes.05G164700' => 'mes', 'Manes.15G087000' => 'mes', 'Manes.15G121500' => 'mes', 'Manes.16G028300' => 'mes', 'Manes.17G046100' => 'mes', 'Manes.17G069800' => 'mes', 'Manes.18G100500' => 'mes', 'Mapoly0002s0109' => 'mpo', 'Mapoly0024s0007' => 'mpo', 'Mapoly0089s0032' => 'mpo', 'MBI04_g42241_MAGBIO' => 'mbi', 'MBI05_g11988_MAGBIO' => 'mbi', 'MBI05_g35452_MAGBIO' => 'mbi', 'MBI07_g30179_MAGBIO' => 'mbi', 'MBI07_g35859_MAGBIO' => 'mbi', 'MBI07_g35860_MAGBIO' => 'mbi', 'MBI07_g37166_MAGBIO' => 'mbi', 'MBI08_g18172_MAGBIO' => 'mbi', 'MBI09_g08441_MAGBIO' => 'mbi', 'MBI13_g01676_MAGBIO' => 'mbi', 'MBI14_g42955_MAGBIO' => 'mbi', 'MBI16_g13161_MAGBIO' => 'mbi', 'MBI17_g27204_MAGBIO' => 'mbi', 'MBI19_g21595_MAGBIO' => 'mbi', 'MD00G1148400' => 'mdo', 'MD02G1301200' => 'mdo', 'MD03G1227800' => 'mdo', 'MD05G1041100' => 'mdo', 'MD05G1124800' => 'mdo', 'MD05G1284000' => 'mdo', 'MD05G1338800' => 'mdo', 'MD05G1338900' => 'mdo', 'MD07G1022800' => 'mdo', 'MD10G1047500' => 'mdo', 'MD10G1127500' => 'mdo', 'MD10G1262300' => 'mdo', 'MD10G1293800' => 'mdo', 'MD16G1074300' => 'mdo', 'Medtr1g021670' => 'mtr', 'Medtr1g096320' => 'mtr', 'Medtr2g013690' => 'mtr', 'Medtr2g019450' => 'mtr', 'Medtr2g085170' => 'mtr', 'Medtr4g088785' => 'mtr', 'Medtr8g055930' => 'mtr', 'Medtr8g085850' => 'mtr', 'MELO3C002605.2' => 'cme', 'MELO3C003891.2' => 'cme', 'MELO3C004012.2' => 'cme', 'MELO3C007134.2' => 'cme', 'MELO3C008118.2' => 'cme', 'MELO3C016700.2' => 'cme', 'MELO3C024127.2' => 'cme', 'MELO3C033361.2' => 'cme', 'MELO3C033362.2' => 'cme', 'Migut.C00430' => 'egut', 'Migut.C01246' => 'egut', 'Migut.E00101' => 'egut', 'Migut.H01486' => 'egut', 'Migut.H01939' => 'egut', 'Migut.K00360' => 'egut', 'Migut.M00910' => 'egut', 'Migut.M01139' => 'egut', 'Migut.N02677' => 'egut', 'MSTRG.13252' => 'ama', 'MSTRG.14701' => 'ama', 'MSTRG.1521' => 'ama', 'MSTRG.15884' => 'ama', 'MSTRG.16242' => 'ama', 'MSTRG.22285' => 'ama', 'MSTRG.22444' => 'ama', 'MSTRG.2349' => 'ama', 'MSTRG.26308' => 'ama', 'MSTRG.28296' => 'ama', 'MSTRG.9895' => 'ama', 'Nitab4.5_0000110g0060' => 'nta', 'Nitab4.5_0000420g0130' => 'nta', 'Nitab4.5_0000422g0030' => 'nta', 'Nitab4.5_0000560g0180' => 'nta', 'Nitab4.5_0000703g0100' => 'nta', 'Nitab4.5_0000786g0200' => 'nta', 'Nitab4.5_0001336g0020' => 'nta', 'Nitab4.5_0001796g0030' => 'nta', 'Nitab4.5_0003348g0060' => 'nta', 'Nitab4.5_0003698g0040' => 'nta', 'Nitab4.5_0003942g0090' => 'nta', 'Nitab4.5_0004775g0070' => 'nta', 'Nitab4.5_0004864g0030' => 'nta', 'Nitab4.5_0005615g0020' => 'nta', 'Nitab4.5_0009288g0030' => 'nta', 'Nitab4.5_0009341g0010' => 'nta', 'Nitab4.5_0009535g0010' => 'nta', 'Nn1g03995' => 'nnu', 'Nn1g04100' => 'nnu', 'Nn1g06530' => 'nnu', 'Nn3g16404' => 'nnu', 'Nn3g17212' => 'nnu', 'Nn3g20776' => 'nnu', 'Nn3g21923' => 'nnu', 'Nn5g27737' => 'nnu', 'Nn5g29461' => 'nnu', 'Nn7g38355' => 'nnu', 'Nn8g39873' => 'nnu', 'Oeu000548.2' => 'oeu', 'Oeu004672.1' => 'oeu', 'Oeu015605.2' => 'oeu', 'Oeu016092.1' => 'oeu', 'Oeu017879.3' => 'oeu', 'Oeu024910.1' => 'oeu', 'Oeu028965.1' => 'oeu', 'Oeu031269.1' => 'oeu', 'Oeu031270.1' => 'oeu', 'Oeu032535.1' => 'oeu', 'Oeu034151.1' => 'oeu', 'Oeu034152.1' => 'oeu', 'Oeu034588.2' => 'oeu', 'Oeu050846.1' => 'oeu', 'Oeu050849.2' => 'oeu', 'Oeu051063.2' => 'oeu', 'Oeu052368.1' => 'oeu', 'Oeu052370.1' => 'oeu', 'Os01g0210400' => 'osa', 'Os01g0304300' => 'osa', 'Os01g0749100' => 'osa', 'Os02g0745800' => 'osa', 'Os03g0769050' => 'osa', 'Os05g0531500' => 'osa', 'Os06g0724300' => 'osa', 'Os11g0198100' => 'osa', 'Peaxi162Scf00069g01425' => 'pax', 'Peaxi162Scf00280g00811' => 'pax', 'Peaxi162Scf00310g00615' => 'pax', 'Peaxi162Scf00362g00542' => 'pax', 'Peaxi162Scf00461g00310' => 'pax', 'Peaxi162Scf00530g00118' => 'pax', 'Peaxi162Scf00541g00057' => 'pax', 'Peaxi162Scf00661g00017' => 'pax', 'Peaxi162Scf00926g00027' => 'pax', 'Peaxi162Scf01064g00263' => 'pax', 'Peaxi162Scf01211g00135' => 'pax', 'PGR004G2336' => 'pgr', 'PGR042G0327' => 'pgr', 'PGR042G1957' => 'pgr', 'PGR042G2003' => 'pgr', 'PGR042G3929' => 'pgr', 'PGR083G1137' => 'pgr', 'PGR083G1364' => 'pgr', 'PGSC0003DMG400003381' => 'stu', 'PGSC0003DMG400003417' => 'stu', 'PGSC0003DMG400008981' => 'stu', 'PGSC0003DMG400012417' => 'stu', 'PGSC0003DMG400012823' => 'stu', 'PGSC0003DMG400016885' => 'stu', 'PGSC0003DMG400022812' => 'stu', 'PGSC0003DMG400029726' => 'stu', 'PGSC0003DMG401009243' => 'stu', 'PGSC0003DMG401031505' => 'stu', 'PGSC0003DMG402031505' => 'stu', 'Phvul.001G017600' => 'pvu', 'Phvul.002G193500' => 'pvu', 'Phvul.002G228900' => 'pvu', 'Phvul.002G236800' => 'pvu', 'Phvul.003G049500' => 'pvu', 'Phvul.005G072000' => 'pvu', 'Phvul.006G164800' => 'pvu', 'Phvul.006G185100' => 'pvu', 'Phvul.007G090000' => 'pvu', 'Potri.001G399800' => 'ptr', 'Potri.002G149900' => 'ptr', 'Potri.004G044100' => 'ptr', 'Potri.004G177600' => 'ptr', 'Potri.009G138000' => 'ptr', 'Potri.010G094000' => 'ptr', 'Potri.011G053000' => 'ptr', 'Potri.011G119300' => 'ptr', 'Potri.013G113700' => 'ptr', 'Potri.018G107800' => 'ptr', 'Potri.019G084100' => 'ptr', 'Pp3c14_23720' => 'ppa', 'Pp3c16_6340' => 'ppa', 'Pp3c23_13420' => 'ppa', 'Pp3c24_2740' => 'ppa', 'Pp3c25_860' => 'ppa', 'Pp3c8_21750' => 'ppa', 'Prupe.1G273000' => 'ppe', 'Prupe.1G273700' => 'ppe', 'Prupe.1G274100' => 'ppe', 'Prupe.2G023300' => 'ppe', 'Prupe.4G048000' => 'ppe', 'Prupe.4G080400' => 'ppe', 'Prupe.4G181200' => 'ppe', 'Prupe.8G056900' => 'ppe', 'Prupe.8G168700' => 'ppe', 'Psat1g189080' => 'psa', 'Psat1g204760' => 'psa', 'Psat4g175560' => 'psa', 'Psat4g177720' => 'psa', 'Psat5g244240' => 'psa', 'Psat6g010720' => 'psa', 'Psat6g187200' => 'psa', 'Psat7g072040' => 'psa', 'PSO017G3501' => 'pso', 'PSO063G2148' => 'pso', 'PSO063G5608' => 'pso', 'PSO210G6392' => 'pso', 'PSO541G2319' => 'pso', 'PSO541G2836' => 'pso', 'PSO541G4012' => 'pso', 'PSO541G6253' => 'pso', 'PSO675G0580' => 'pso', 'PSO675G0856' => 'pso', 'PSO675G5635' => 'pso', 'PSO675G9157' => 'pso', 'PSO832G1660' => 'pso', 'PSO832G1969' => 'pso', 'QL02p007186' => 'qlo', 'QL02p033904' => 'qlo', 'QL03p064391' => 'qlo', 'QL05p040593' => 'qlo', 'QL05p058242' => 'qlo', 'QL08p021825' => 'qlo', 'QL11p004981' => 'qlo', 'RcHm_v2.0_Chr1g0318301' => 'rch', 'RcHm_v2.0_Chr4g0418501' => 'rch', 'RcHm_v2.0_Chr4g0439971' => 'rch', 'RcHm_v2.0_Chr5g0008541' => 'rch', 'RcHm_v2.0_Chr5g0014101' => 'rch', 'RcHm_v2.0_Chr5g0014131' => 'rch', 'RcHm_v2.0_Chr5g0033621' => 'rch', 'RcHm_v2.0_Chr6g0272041' => 'rch', 'RcHm_v2.0_Chr6g0278831' => 'rch', 'Rhsim02G0130400' => 'rsi', 'Rhsim02G0171100' => 'rsi', 'Rhsim05G0053000' => 'rsi', 'Rhsim05G0053100' => 'rsi', 'Rhsim06G0096500' => 'rsi', 'Rhsim06G0096600' => 'rsi', 'Rhsim06G0199100' => 'rsi', 'Rhsim12G0062300' => 'rsi', 'Rhsim12G0062800' => 'rsi', 'Sabra02G0118600' => 'sbr', 'Sabra04G0027300' => 'sbr', 'Sabra04G0119500' => 'sbr', 'Sabra08G0112500' => 'sbr', 'Sabra11G0036800' => 'sbr', 'Sabra11G0103800' => 'sbr', 'Sabra13G0096300' => 'sbr', 'Sabra16G0262300' => 'sbr', 'Sabra18G0091700' => 'sbr', 'Sabra19G0095400' => 'sbr', 'SalBow6G3080' => 'sbo', 'SalBow7G1157' => 'sbo', 'SalBow7G2123' => 'sbo', 'SalBow7G2285' => 'sbo', 'SalBow7G3537' => 'sbo', 'SalBow8G2947' => 'sbo', 'SalBow8G4463' => 'sbo', 'SalBow8G5466' => 'sbo', 'Sc01g0001750' => 'sci', 'Sc02g0006640' => 'sci', 'Sc02g0006670' => 'sci', 'Sc04g0008220' => 'sci', 'Sc05g0006190' => 'sci', 'Sc08g0002760' => 'sci', 'Sc17g0006170' => 'sci', 'Sc22g0002050' => 'sci', 'Sc23g0001190' => 'sci', 'Sc24g0000980' => 'sci', 'Sed0006245' => 'sed', 'Sed0007543' => 'sed', 'Sed0009411' => 'sed', 'Sed0010765' => 'sed', 'Sed0012944' => 'sed', 'Sed0014682' => 'sed', 'Sed0016174' => 'sed', 'Sed0016796' => 'sed', 'Sed0020317' => 'sed', 'Sed0021467' => 'sed', 'SEGI_01316' => 'sgi', 'SEGI_03374' => 'sgi', 'SEGI_16265' => 'sgi', 'SEGI_18569' => 'sgi', 'SEGI_20351' => 'sgi', 'SEGI_26395' => 'sgi', 'SEGI_29469' => 'sgi', 'SEGI_34771' => 'sgi', 'SEGI_36769' => 'sgi', 'SEGI_37139' => 'sgi', 'SGA_v2.0_scaffold100G29687' => 'sas', 'SGA_v2.0_scaffold118G32472' => 'sas', 'SGA_v2.0_scaffold14G07051' => 'sas', 'SGA_v2.0_scaffold183G39845' => 'sas', 'SGA_v2.0_scaffold1G00174' => 'sas', 'SGA_v2.0_scaffold22G09714' => 'sas', 'SGA_v2.0_scaffold333G48992' => 'sas', 'SGA_v2.0_scaffold46G17491' => 'sas', 'SGA_v2.0_scaffold49G18294' => 'sas', 'SGA_v2.0_scaffold63G21658' => 'sas', 'SHI01741' => 'shi', 'SHI05771' => 'shi', 'SHI18077' => 'shi', 'SHI20525' => 'shi', 'SHI20527' => 'shi', 'SHI20528' => 'shi', 'SMO172G0185' => 'smo', 'SMO198G0020' => 'smo', 'SMO351G0006' => 'smo', 'SMO356G0118' => 'smo', 'SMO358G0296' => 'smo', 'SMO367G0079' => 'smo', 'SMO367G1277' => 'smo', 'Solyc01g014220.3' => 'sly', 'Solyc01g111770.2' => 'sly', 'Solyc02g078180.3' => 'sly', 'Solyc03g006430.3' => 'sly', 'Solyc03g006456.1' => 'sly', 'Solyc03g079860.2' => 'sly', 'Solyc04g079770.3' => 'sly', 'Solyc05g007430.4' => 'sly', 'Solyc07g063150.3' => 'sly', 'Solyc08g016620.3' => 'sly', 'Solyc09g057590.3' => 'sly', 'Solyc09g057600.1' => 'sly', 'Solyc10g009050.3' => 'sly', 'Solyc11g017420.2' => 'sly', 'Sopen01g053810' => 'spe', 'Sopen02g023040' => 'spe', 'Sopen03g002440' => 'spe', 'Sopen04g033350' => 'spe', 'Sopen05g003310' => 'spe', 'Sopen07g004050' => 'spe', 'Sopen07g031340' => 'spe', 'Sopen08g006990' => 'spe', 'Sopen10g004830' => 'spe', 'Sopen11g009370' => 'spe', 'Sp1g24450' => 'spa', 'Sp1g29670' => 'spa', 'Sp1g39600' => 'spa', 'Sp2g11080' => 'spa', 'Sp2g13970' => 'spa', 'Sp4g16130' => 'spa', 'Sp6g13080' => 'spa', 'Sp7g37270' => 'spa', 'TAR371G0065' => 'tar', 'TAR376G0340' => 'tar', 'TAR376G0435' => 'tar', 'TAR381G0002' => 'tar', 'TAR381G1236' => 'tar', 'TAR624G0055' => 'tar', 'TAR624G0324' => 'tar', 'TAR624G0696' => 'tar', 'TAR624G0906' => 'tar', 'TAR625G0107' => 'tar', 'TAR626G0015' => 'tar', 'TAR626G1356' => 'tar', 'TAR627G0888' => 'tar', 'TAR628G0399' => 'tar', 'TAR628G1327' => 'tar', 'TAR629G2831' => 'tar', 'TAR629G2874' => 'tar', 'TAR633G1432' => 'tar', 'TAR633G2771' => 'tar', 'THA.LOC104803394' => 'tha', 'THA.LOC104805153' => 'tha', 'THA.LOC104806784' => 'tha', 'THA.LOC104810473' => 'tha', 'THA.LOC104813100' => 'tha', 'THA.LOC104814215' => 'tha', 'THA.LOC104815554' => 'tha', 'THA.LOC104820544' => 'tha', 'THA.LOC104824754' => 'tha', 'THA.LOC104827717' => 'tha', 'Thecc.02G031400' => 'tca', 'Thecc.02G055900' => 'tca', 'Thecc.02G350800' => 'tca', 'Thecc.06G150900' => 'tca', 'Thecc.06G186600' => 'tca', 'Thecc.07G089600' => 'tca', 'Thecc.08G020400' => 'tca', 'Thecc.08G182100' => 'tca', 'Thhalv10000873m.g' => 'esa', 'Thhalv10004185m.g' => 'esa', 'Thhalv10006981m.g' => 'esa', 'Thhalv10007204m.g' => 'esa', 'Thhalv10011374m.g' => 'esa', 'Thhalv10013482m.g' => 'esa', 'Thhalv10017801m.g' => 'esa', 'Thhalv10024983m.g' => 'esa', 'TPR.G12072' => 'tpr', 'TPR.G15769' => 'tpr', 'TPR.G16504' => 'tpr', 'TPR.G16506' => 'tpr', 'TPR.G24345' => 'tpr', 'TPR.G26666' => 'tpr', 'TPR.G27320' => 'tpr', 'TPR.G31819' => 'tpr', 'TPR.G38879' => 'tpr', 'TPR.G39015' => 'tpr', 'TPR.G8819' => 'tpr', 'TWI09G0924' => 'twi', 'TWI12G0811' => 'twi', 'TWI12G1294' => 'twi', 'TWI31G0150' => 'twi', 'TWI36G1262' => 'twi', 'TWI38G1287' => 'twi', 'TWI38G1633' => 'twi', 'TWI38G1982' => 'twi', 'TWI39G0116' => 'twi', 'TWI60G1011' => 'twi', 'TWI63G0171' => 'twi', 'TWI73G0839' => 'twi', 'TWI79G1511' => 'twi', 'unitig_0.g915' => 'ugi', 'unitig_0.g916' => 'ugi', 'unitig_21.g20219' => 'ugi', 'unitig_21.g20416' => 'ugi', 'unitig_578.g16132' => 'ugi', 'unitig_578.g16718' => 'ugi', 'unitig_62.g23481' => 'ugi', 'unitig_744.g24535' => 'ugi', 'unitig_749.g13525' => 'ugi', 'vmacro01248' => 'vma', 'vmacro02290' => 'vma', 'vmacro10946' => 'vma', 'vmacro11865' => 'vma', 'vmacro12493' => 'vma', 'vmacro17322' => 'vma', 'vmacro21599' => 'vma', 'vmacro23041' => 'vma', 'VMungo0251G0004' => 'vmu', 'VMungo0251G2639' => 'vmu', 'VMungo0251G2967' => 'vmu', 'VMungo0540G0864' => 'vmu', 'VMungo0540G1569' => 'vmu', 'VMungo0647G0317' => 'vmu', 'VMungo0720G1373' => 'vmu', 'VMungo0720G1508' => 'vmu', 'VMungo1080G0485' => 'vmu', 'VMungo1215G3177' => 'vmu', 'Zm00001eb112600' => 'zma', 'Zm00001eb120220' => 'zma', 'Zm00001eb153240' => 'zma', 'Zm00001eb168880' => 'zma', 'Zm00001eb213920' => 'zma', 'Zm00001eb228280' => 'zma', 'Zm00001eb254580' => 'zma', 'Zm00001eb272180' => 'zma', 'Zm00001eb293190' => 'zma', 'Zm00001eb322930' => 'zma', 'Zm00001eb353360' => 'zma', 'Zm00001eb353390' => 'zma', 'Zm00001eb353430' => 'zma', 'Zm00001eb353440' => 'zma', 'Zm00001eb353780' => 'zma' ) $gf_id = 'HOM05D000499' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000499' ) $data_identifier = 'HOM05D000499' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 29, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 12, 'amhyb' => (int) 8, 'aly' => (int) 12, 'aox' => (int) 9, 'arhy' => (int) 26, 'ath' => (int) 8, 'atr' => (int) 7, 'acertr' => (int) 10, 'cqu' => (int) 15, 'bca' => (int) 29, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 11, 'cansat' => (int) 8, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 9, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 8, 'cpa' => (int) 10, 'csa' => (int) 7, 'camsi' => (int) 20, 'dca' => (int) 8, 'din' => (int) 12, 'dzi' => (int) 14, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 6, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 38, 'gra' => (int) 16, 'vvi' => (int) 8, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 5, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 11, 'lja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 11, 'mpo' => (int) 3, 'mbi' => (int) 14, 'mdo' => (int) 14, 'mtr' => (int) 8, 'cme' => (int) 9, 'egut' => (int) 9, 'ama' => (int) 11, 'nta' => (int) 17, 'nnu' => (int) 11, 'oeu' => (int) 18, 'osa' => (int) 8, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 6, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 9, 'rsi' => (int) 9, 'sbr' => (int) 10, 'sbo' => (int) 8, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 10, 'sas' => (int) 10, 'shi' => (int) 6, 'smo' => (int) 7, 'sly' => (int) 14, 'spe' => (int) 10, 'spa' => (int) 8, 'tar' => (int) 19, 'tha' => (int) 10, 'tca' => (int) 8, 'esa' => (int) 8, 'tpr' => (int) 11, 'twi' => (int) 13, 'ugi' => (int) 9, 'vma' => (int) 8, 'vmu' => (int) 10, 'zma' => (int) 15 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb353780' $species_info = array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ) $local_species = 'cbr' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000499', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1066', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p29780' => 'bna', 'A02p33180' => 'bna', 'A03p16470' => 'bna', 'A03p66010' => 'bna', 'A04p25970' => 'bna', 'A06p01270' => 'bna', 'A06p46080' => 'bna', 'A07p11400' => 'bna', 'A08p01840' => 'bna', 'A08p08230' => 'bna', 'A08p25740' => 'bna', 'A09p32070' => 'bna', 'A09p37830' => 'bna', 'A09p42840' => 'bna', 'A09p42850' => 'bna', 'Aa31LG10G2060' => 'aar', 'Aa31LG2G7410' => 'aar', 'Aa31LG6G10200' => 'aar', 'Aa31LG6G16680' => 'aar', 'Aa31LG6G8470' => 'aar', 'Aa31LG9G12730' => 'aar', 'Aa31LG9G13680' => 'aar', 'Aa31LG9G14920' => 'aar', 'Aa31LG9G6650' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4977' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5467' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3254' => 'aag', 'Actinidia02578' => 'ach', 'Actinidia07693' => 'ach', 'Actinidia08413' => 'ach', 'Actinidia08414' => 'ach', 'Actinidia15289' => 'ach', 'Actinidia19871' => 'ach', 'Actinidia21475' => 'ach', 'Actinidia22576' => 'ach', 'Actinidia28327' => 'ach', 'Actinidia32491' => 'ach', 'Actinidia39463' => 'ach', 'Actinidia39571' => 'ach', 'Ah.01g013750' => 'amhyb', 'Ah.01g023210' => 'amhyb', 'Ah.04g164850' => 'amhyb', 'Ah.05g178060' => 'amhyb', 'Ah.07g204270' => 'amhyb', 'Ah.07g208480' => 'amhyb', 'Ah.09g237410' => 'amhyb', 'Ah.14g089460' => 'amhyb', 'AL1G41790' => 'aly', 'AL1G49050' => 'aly', 'AL1G53810' => 'aly', 'AL1G61400' => 'aly', 'AL4G18580' => 'aly', 'AL5G12510' => 'aly', 'AL5G12540' => 'aly', 'AL6G43230' => 'aly', 'AL7G10370' => 'aly', 'AL7G19250' => 'aly', 'AL8G12240' => 'aly', 'AL8G18540' => 'aly', 'Aqoxy1G02409' => 'aox', 'Aqoxy2G03993' => 'aox', 'Aqoxy3G03357' => 'aox', 'Aqoxy4G00785' => 'aox', 'Aqoxy5G02598' => 'aox', 'Aqoxy6G00132' => 'aox', 'Aqoxy7G01776' => 'aox', 'Aqoxy7G02316' => 'aox', 'Aqoxy7G03973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.12AFKW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B8730' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27IQR1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3F75VG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3RE0GA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41TCQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.527VTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FIR39' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5W8UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DA38EV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ63HS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H1I32C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HC27T5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4M8AP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7N3CZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9UVDZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LS1NQA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT1D4B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SKC4TM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCFV76' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF9Q1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQWD9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1ZM88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WE07RT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YCK7VH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJE6Q6' => 'arhy', 'AT1G28240' => 'ath', 'AT1G34550' => 'ath', 'AT1G53040' => 'ath', 'AT2G02910' => 'ath', 'AT4G09630' => 'ath', 'AT4G38500' => 'ath', 'AT5G42660' => 'ath', 'AT5G46220' => 'ath', 'ATR0152G026' => 'atr', 'ATR0564G343' => 'atr', 'ATR0706G151' => 'atr', 'ATR0733G207' => 'atr', 'ATR0751G234' => 'atr', 'ATR0807G048' => 'atr', 'ATR1091G084' => 'atr', 'Atru.chr10.1229' => 'acertr', 'Atru.chr10.1230' => 'acertr', 'Atru.chr10.1874' => 'acertr', 'Atru.chr11.1808' => 'acertr', 'Atru.chr13.1795' => 'acertr', 'Atru.chr13.570' => 'acertr', 'Atru.chr2.2608' => 'acertr', 'Atru.chr2.2609' => 'acertr', 'Atru.chr5.3428' => 'acertr', 'Atru.chr8.1171' => 'acertr', 'AUR62004651' => 'cqu', 'AUR62008675' => 'cqu', 'AUR62010014' => 'cqu', 'AUR62013004' => 'cqu', 'AUR62014825' => 'cqu', 'AUR62015015' => 'cqu', 'AUR62015151' => 'cqu', 'AUR62017020' => 'cqu', 'AUR62019422' => 'cqu', 'AUR62023570' => 'cqu', 'AUR62025571' => 'cqu', 'AUR62029098' => 'cqu', 'AUR62033863' => 'cqu', 'AUR62034296' => 'cqu', 'AUR62040075' => 'cqu', 'BcaB02g07334' => 'bca', 'BcaB02g10575' => 'bca', 'BcaB03g12119' => 'bca', 'BcaB03g12120' => 'bca', 'BcaB03g13945' => 'bca', 'BcaB04g17123' => 'bca', 'BcaB04g17867' => 'bca', 'BcaB04g19839' => 'bca', 'BcaB07g30317' => 'bca', 'BcaB07g32432' => 'bca', 'BcaB07g33362' => 'bca', 'BcaB08g36611' => 'bca', 'BcaC01g00028' => 'bca', 'BcaC01g01356' => 'bca', 'BcaC01g02034' => 'bca', 'BcaC01g06051' => 'bca', 'BcaC03g16839' => 'bca', 'BcaC03g17176' => 'bca', 'BcaC05g26829' => 'bca', 'BcaC06g31490' => 'bca', 'BcaC06g35344' => 'bca', 'BcaC06g36570' => 'bca', 'BcaC07g37537' => 'bca', 'BcaC08g43491' => 'bca', 'BcaC08g43773' => 'bca', 'BcaNung00234' => 'bca', 'BcaNung01982' => 'bca', 'BcaNung03707' => 'bca', 'BcaNung06454' => 'bca', 'BolC2t10762H' => 'bol', 'BolC2t11191H' => 'bol', 'BolC3t14322H' => 'bol', 'BolC3t19747H' => 'bol', 'BolC3t21425H' => 'bol', 'BolC4t27800H' => 'bol', 'BolC5t31423H' => 'bol', 'BolC6t35951H' => 'bol', 'BolC6t36282H' => 'bol', 'BolC7t40678H' => 'bol', 'BolC7t40679H' => 'bol', 'BolC7t42222H' => 'bol', 'BolC7t43492H' => 'bol', 'BolC7t46785H' => 'bol', 'BolC8t47853H' => 'bol', 'BolC9t56805H' => 'bol', 'BraA02t08000Z' => 'bra', 'BraA02t08341Z' => 'bra', 'BraA03t10936Z' => 'bra', 'BraA03t15657Z' => 'bra', 'BraA04t18100Z' => 'bra', 'BraA05t20523Z' => 'bra', 'BraA06t23353Z' => 'bra', 'BraA06t27473Z' => 'bra', 'BraA06t27769Z' => 'bra', 'BraA07t28928Z' => 'bra', 'BraA08t32236Z' => 'bra', 'BraA08t32841Z' => 'bra', 'BraA08t34524Z' => 'bra', 'BraA09t38742Z' => 'bra', 'BraA09t39295Z' => 'bra', 'C02p47180' => 'bna', 'C02p50990' => 'bna', 'C03p19360' => 'bna', 'C03p74950' => 'bna', 'C03p91000' => 'bna', 'C04p63260' => 'bna', 'C05p27050' => 'bna', 'C06p08750' => 'bna', 'C06p11490' => 'bna', 'C07p02820' => 'bna', 'C07p17180' => 'bna', 'C07p29440' => 'bna', 'C07p63730' => 'bna', 'C09p39260' => 'bna', 'CAN.G1164.34' => 'can', 'CAN.G1164.39' => 'can', 'CAN.G1530.3' => 'can', 'CAN.G162.61' => 'can', 'CAN.G176.6' => 'can', 'CAN.G289.49' => 'can', 'CAN.G370.21' => 'can', 'CAN.G370.22' => 'can', 'CAN.G371.117' => 'can', 'CAN.G58.37' => 'can', 'CAN.G588.98' => 'can', 'CANSAT21G2266' => 'cansat', 'CANSAT25G2799' => 'cansat', 'CANSAT35G0862' => 'cansat', 'CANSAT35G1704' => 'cansat', 'CANSAT35G1760' => 'cansat', 'CANSAT56G3971' => 'cansat', 'CANSAT56G4116' => 'cansat', 'CANSAT80G1259' => 'cansat', 'CARHR027730' => 'chi', 'CARHR033880' => 'chi', 'CARHR043270' => 'chi', 'CARHR145330' => 'chi', 'CARHR145340' => 'chi', 'CARHR175570' => 'chi', 'CARHR181570' => 'chi', 'CARHR258470' => 'chi', 'CARHR260490' => 'chi', 'CARHR294220' => 'chi', 'Carub.0001s2668' => 'cru', 'Carub.0001s3257' => 'cru', 'Carub.0001s4220' => 'cru', 'Carub.0005s0179' => 'cru', 'Carub.0006s2807' => 'cru', 'Carub.0007s0039' => 'cru', 'Carub.0008s0169' => 'cru', 'Carub.0008s0636' => 'cru', 'Ca_00338_v3' => 'car', 'Ca_00542_v3' => 'car', 'Ca_01844_v3' => 'car', 'Ca_10611_v3' => 'car', 'Ca_13326_v3' => 'car', 'Ca_17944_v3' => 'car', 'Ca_18546_v3' => 'car', 'Ca_24219_v3' => 'car', 'Ca_29972_v3' => 'car', 'CBR_g3681' => 'cbr', 'CBR_g40021' => 'cbr', 'Cc01_g08140' => 'ccan', 'Cc02_g13410' => 'ccan', 'Cc02_g37480' => 'ccan', 'Cc05_g12030' => 'ccan', 'Cc09_g03370' => 'ccan', 'Cc09_g10300' => 'ccan', 'Cc10_g03530' => 'ccan', 'Cc10_g11380' => 'ccan', 'CDE01G0176' => 'cde', 'CDE02G0675' => 'cde', 'CDE02G0942' => 'cde', 'CDE02G1153' => 'cde', 'CDE02G4177' => 'cde', 'CDE04G2117' => 'cde', 'CDE04G2736' => 'cde', 'CDE08G1161' => 'cde', 'CDE09G1238' => 'cde', 'Cfa000467' => 'cfa', 'Cfa000947' => 'cfa', 'Cfa004969' => 'cfa', 'Cfa005284' => 'cfa', 'Cfa008993' => 'cfa', 'Cfa018187' => 'cfa', 'Cfa018454' => 'cfa', 'Cfa020585' => 'cfa', 'Ciclev10000424m.g' => 'ccl', 'Ciclev10003605m.g' => 'ccl', 'Ciclev10007828m.g' => 'ccl', 'Ciclev10014620m.g' => 'ccl', 'Ciclev10015169m.g' => 'ccl', 'Ciclev10018291m.g' => 'ccl', 'Ciclev10028256m.g' => 'ccl', 'Ciclev10033822m.g' => 'ccl', 'CiPaw.05G060300' => 'cil', 'CiPaw.05G085000' => 'cil', 'CiPaw.06G083700' => 'cil', 'CiPaw.06G120300' => 'cil', 'CiPaw.09G060500' => 'cil', 'CiPaw.09G123800' => 'cil', 'CiPaw.11G169700' => 'cil', 'CiPaw.12G118300' => 'cil', 'CiPaw.15G071000' => 'cil', 'CiPaw.15G081900' => 'cil', 'ClCG01G024610' => 'cla', 'ClCG03G006070' => 'cla', 'ClCG05G019250' => 'cla', 'ClCG09G009500' => 'cla', 'ClCG11G008200' => 'cla', 'ClCG11G018080' => 'cla', 'COL.COLO4_17373' => 'col', 'COL.COLO4_22994' => 'col', 'COL.COLO4_26389' => 'col', 'COL.COLO4_27170' => 'col', 'COL.COLO4_31074' => 'col', 'COL.COLO4_31465' => 'col', 'COL.COLO4_36438' => 'col', 'COL.COLO4_36439' => 'col', 'Cpa.g.c38781' => 'cpa', 'Cpa.g.sc128.12' => 'cpa', 'Cpa.g.sc166.7' => 'cpa', 'Cpa.g.sc166.8' => 'cpa', 'Cpa.g.sc20.111' => 'cpa', 'Cpa.g.sc27.31' => 'cpa', 'Cpa.g.sc64.36' => 'cpa', 'Cpa.g.sc64.37' => 'cpa', 'Cpa.g.sc66.49' => 'cpa', 'Cpa.g.sc80.64' => 'cpa', 'CsaV3_1G012320' => 'csa', 'CsaV3_2G008480' => 'csa', 'CsaV3_2G033450' => 'csa', 'CsaV3_3G044830' => 'csa', 'CsaV3_4G033710' => 'csa', 'CsaV3_6G051730' => 'csa', 'CsaV3_7G025350' => 'csa', 'CSS0001067' => 'camsi', 'CSS0005996' => 'camsi', 'CSS0006590' => 'camsi', 'CSS0009673' => 'camsi', 'CSS0010201' => 'camsi', 'CSS0010549' => 'camsi', 'CSS0011364' => 'camsi', 'CSS0014473' => 'camsi', 'CSS0014961' => 'camsi', 'CSS0020191' => 'camsi', 'CSS0021165' => 'camsi', 'CSS0022306' => 'camsi', 'CSS0030591' => 'camsi', 'CSS0030696' => 'camsi', 'CSS0032653' => 'camsi', 'CSS0037487' => 'camsi', 'CSS0041102' => 'camsi', 'CSS0041261' => 'camsi', 'CSS0046246' => 'camsi', 'CSS0049256' => 'camsi', 'DCAR_004075' => 'dca', 'DCAR_011538' => 'dca', 'DCAR_019553' => 'dca', 'DCAR_020952' => 'dca', 'DCAR_021739' => 'dca', 'DCAR_027407' => 'dca', 'DCAR_027913' => 'dca', 'DCAR_028066' => 'dca', 'Dinv05899' => 'din', 'Dinv07563' => 'din', 'Dinv08010' => 'din', 'Dinv14125' => 'din', 'Dinv20172' => 'din', 'Dinv30743' => 'din', 'Dinv31229' => 'din', 'Dinv34162' => 'din', 'Dinv36028' => 'din', 'Dinv39368' => 'din', 'Dinv40565' => 'din', 'Dinv41706' => 'din', 'Duzib052G0089' => 'dzi', 'Duzib116G0641' => 'dzi', 'Duzib132G0069' => 'dzi', 'Duzib132G1219' => 'dzi', 'Duzib147G0278' => 'dzi', 'Duzib160G0480' => 'dzi', 'Duzib170G0661' => 'dzi', 'Duzib177G0591' => 'dzi', 'Duzib187G1353' => 'dzi', 'Duzib192G0858' => 'dzi', 'Duzib192G0883' => 'dzi', 'Duzib213G0506' => 'dzi', 'Duzib235G0289' => 'dzi', 'Duzib251G0422' => 'dzi', 'ECA232G3898' => 'eca', 'ECA233G5950' => 'eca', 'ECA234G1699' => 'eca', 'ECA234G2421' => 'eca', 'ECA236G0426' => 'eca', 'ECA236G4331' => 'eca', 'ECA248G2573' => 'eca', 'EL10Ac1g00077' => 'bvu', 'EL10Ac1g01746' => 'bvu', 'EL10Ac2g03464' => 'bvu', 'EL10Ac4g08176' => 'bvu', 'EL10Ac7g17521' => 'bvu', 'EL10Ac8g20386' => 'bvu', 'EL10Ac9g21343' => 'bvu', 'EL10Ac9g22688' => 'bvu', 'Eucgr.B03434' => 'egr', 'Eucgr.D00618' => 'egr', 'Eucgr.E02395' => 'egr', 'Eucgr.F01129' => 'egr', 'Eucgr.F02622' => 'egr', 'Eucgr.F04207' => 'egr', 'FAN01G0570' => 'fan', 'FAN03G3351' => 'fan', 'FAN06G3702' => 'fan', 'FAN07G2149' => 'fan', 'FAN10G3758' => 'fan', 'FAN11G1170' => 'fan', 'FAN11G2050' => 'fan', 'FAN11G2724' => 'fan', 'FAN12G1700' => 'fan', 'FAN12G2028' => 'fan', 'FAN15G1160' => 'fan', 'FAN15G3063' => 'fan', 'FAN16G2540' => 'fan', 'FAN16G3077' => 'fan', 'FAN16G3624' => 'fan', 'FAN17G0221' => 'fan', 'FAN20G2492' => 'fan', 'FAN20G2905' => 'fan', 'FAN21G0548' => 'fan', 'FAN21G1300' => 'fan', 'FAN22G0077' => 'fan', 'FAN22G1315' => 'fan', 'FAN24G1280' => 'fan', 'FAN24G1445' => 'fan', 'FAN24G3527' => 'fan', 'FAN25G0464' => 'fan', 'FAN25G2885' => 'fan', 'FAN25G3270' => 'fan', 'FAN27G1101' => 'fan', 'FAN27G2846' => 'fan', 'FAN27G3524' => 'fan', 'FvH4_2g11770' => 'fve', 'FvH4_2g15630' => 'fve', 'FvH4_3g05570' => 'fve', 'FvH4_3g09110' => 'fve', 'FvH4_3g19940' => 'fve', 'FvH4_4g04821' => 'fve', 'FvH4_4g31480' => 'fve', 'FvH4_7g01740' => 'fve', 'Glyma.05G130400' => 'gma', 'Glyma.05G156400' => 'gma', 'Glyma.07G197000' => 'gma', 'Glyma.08G085151' => 'gma', 'Glyma.08G114500' => 'gma', 'Glyma.08G300400' => 'gma', 'Glyma.10G215800' => 'gma', 'Glyma.12G224400' => 'gma', 'Glyma.13G179300' => 'gma', 'Glyma.13G218151' => 'gma', 'Glyma.13G238800' => 'gma', 'Glyma.13G276900' => 'gma', 'Glyma.14G078200' => 'gma', 'Glyma.15G074500' => 'gma', 'Glyma.15G094100' => 'gma', 'Glyma.17G247200' => 'gma', 'Glyma.18G120100' => 'gma', 'Glyma.20G176000' => 'gma', 'Gohir.A01G063600' => 'ghi', 'Gohir.A01G170301' => 'ghi', 'Gohir.A02G060500' => 'ghi', 'Gohir.A05G133850' => 'ghi', 'Gohir.A05G161400' => 'ghi', 'Gohir.A06G012900' => 'ghi', 'Gohir.A06G035901' => 'ghi', 'Gohir.A06G127100' => 'ghi', 'Gohir.A06G210500' => 'ghi', 'Gohir.A08G008650' => 'ghi', 'Gohir.A09G072700' => 'ghi', 'Gohir.A09G088301' => 'ghi', 'Gohir.A10G040600' => 'ghi', 'Gohir.A12G036300' => 'ghi', 'Gohir.A12G143350' => 'ghi', 'Gohir.A12G165500' => 'ghi', 'Gohir.A13G145700' => 'ghi', 'Gohir.D01G050000' => 'ghi', 'Gohir.D01G051366' => 'ghi', 'Gohir.D01G161350' => 'ghi', 'Gohir.D02G065900' => 'ghi', 'Gohir.D05G164200' => 'ghi', 'Gohir.D05G355500' => 'ghi', 'Gohir.D06G010400' => 'ghi', 'Gohir.D06G111250' => 'ghi', 'Gohir.D06G132000' => 'ghi', 'Gohir.D06G210500' => 'ghi', 'Gohir.D07G165675' => 'ghi', 'Gohir.D08G062240' => 'ghi', 'Gohir.D08G086101' => 'ghi', 'Gohir.D08G138060' => 'ghi', 'Gohir.D09G072300' => 'ghi', 'Gohir.D10G041400' => 'ghi', 'Gohir.D11G191020' => 'ghi', 'Gohir.D11G212066' => 'ghi', 'Gohir.D12G036300' => 'ghi', 'Gohir.D12G168600' => 'ghi', 'Gohir.D13G150600' => 'ghi', 'Gorai.001G057300' => 'gra', 'Gorai.002G069900' => 'gra', 'Gorai.002G200000' => 'gra', 'Gorai.003G067600' => 'gra', 'Gorai.005G074800' => 'gra', 'Gorai.006G087300' => 'gra', 'Gorai.008G037500' => 'gra', 'Gorai.008G181400' => 'gra', 'Gorai.009G169400' => 'gra', 'Gorai.009G387900' => 'gra', 'Gorai.010G013300' => 'gra', 'Gorai.010G153800' => 'gra', 'Gorai.010G255800' => 'gra', 'Gorai.011G043700' => 'gra', 'Gorai.011G198900' => 'gra', 'Gorai.013G168400' => 'gra', 'GSVIVG01005212001' => 'vvi', 'GSVIVG01006163001' => 'vvi', 'GSVIVG01009625001' => 'vvi', 'GSVIVG01014338001' => 'vvi', 'GSVIVG01020005001' => 'vvi', 'GSVIVG01021450001' => 'vvi', 'GSVIVG01023975001' => 'vvi', 'GSVIVG01034490001' => 'vvi', 'HanXRQChr04g0112071' => 'han', 'HanXRQChr05g0131151' => 'han', 'HanXRQChr09g0262371' => 'han', 'HanXRQChr09g0268401' => 'han', 'HanXRQChr10g0279241' => 'han', 'HanXRQChr10g0297961' => 'han', 'HanXRQChr11g0326231' => 'han', 'HanXRQChr11g0328471' => 'han', 'HanXRQChr16g0507941' => 'han', 'HanXRQChr17g0560211' => 'han', 'Haze_02108' => 'cav', 'Haze_02428' => 'cav', 'Haze_05593' => 'cav', 'Haze_06448' => 'cav', 'Haze_09427' => 'cav', 'Haze_12022' => 'cav', 'Haze_17612' => 'cav', 'Haze_17928' => 'cav', 'Hma1.2p1_0032F.1_g019250' => 'hma', 'Hma1.2p1_0163F.1_g072690' => 'hma', 'Hma1.2p1_0265F.1_g106710' => 'hma', 'Hma1.2p1_0286F.1_g113970' => 'hma', 'Hma1.2p1_0363F.1_g136640' => 'hma', 'Hma1.2p1_0584F.1_g183470' => 'hma', 'Hma1.2p1_0885F.1_g232570' => 'hma', 'HPP92_006022' => 'vpl', 'HPP92_007320' => 'vpl', 'HPP92_011521' => 'vpl', 'HPP92_019387' => 'vpl', 'HPP92_024038' => 'vpl', 'Hund05891' => 'sun', 'Hund06450' => 'sun', 'Hund12053' => 'sun', 'Hund16800' => 'sun', 'Hund21222' => 'sun', 'Hund22896' => 'sun', 'Hund23746' => 'sun', 'Hund27083' => 'sun', 'Lalb_Chr02g0141831' => 'lal', 'Lalb_Chr02g0141841' => 'lal', 'Lalb_Chr05g0220411' => 'lal', 'Lalb_Chr06g0162081' => 'lal', 'Lalb_Chr09g0327651' => 'lal', 'Lalb_Chr13g0295051' => 'lal', 'Lalb_Chr15g0086801' => 'lal', 'Lalb_Chr16g0383781' => 'lal', 'Lalb_Chr16g0383791' => 'lal', 'Lalb_Chr18g0055441' => 'lal', 'Lalb_Chr18g0059611' => 'lal', 'Lalb_Chr20g0109661' => 'lal', 'Lalb_Chr20g0109831' => 'lal', 'Lalb_Chr20g0121871' => 'lal', 'Lalb_Chr22g0355361' => 'lal', 'Lalb_Chr25g0286371' => 'lal', 'Lj1A1187G43' => 'lonja', 'Lj1A1205T50' => 'lonja', 'Lj1A800G33' => 'lonja', 'Lj1C1187T7' => 'lonja', 'Lj1C843T11' => 'lonja', 'Lj1g0010940' => 'lja', 'Lj2A288T69' => 'lonja', 'Lj3g0024276' => 'lja', 'Lj4A47T76' => 'lonja', 'Lj4g0005805' => 'lja', 'Lj4g0006097' => 'lja', 'Lj4g0008528' => 'lja', 'Lj4g0024907' => 'lja', 'Lj5g0012472' => 'lja', 'Lj5g0018648' => 'lja', 'Lj6C789G1' => 'lonja', 'Lj6g0004000' => 'lja', 'Lj7A292G67' => 'lonja', 'Lj7A292T64' => 'lonja', 'Lj9A400T58' => 'lonja', 'Lsat_1_v5_gn_1_126181' => 'lsa', 'Lsat_1_v5_gn_4_123041' => 'lsa', 'Lsat_1_v5_gn_4_133620' => 'lsa', 'Lsat_1_v5_gn_4_53221' => 'lsa', 'Lsat_1_v5_gn_4_71961' => 'lsa', 'Lsat_1_v5_gn_7_105241' => 'lsa', 'Lsat_1_v5_gn_7_21361' => 'lsa', 'Lsat_1_v5_gn_7_28860' => 'lsa', 'Lsat_1_v5_gn_7_31260' => 'lsa', 'Lsat_1_v5_gn_8_52801' => 'lsa', 'Manes.02G191400' => 'mes', 'Manes.03G110100' => 'mes', 'Manes.04G071100' => 'mes', 'Manes.05G100500' => 'mes', 'Manes.05G164700' => 'mes', 'Manes.15G087000' => 'mes', 'Manes.15G121500' => 'mes', 'Manes.16G028300' => 'mes', 'Manes.17G046100' => 'mes', 'Manes.17G069800' => 'mes', 'Manes.18G100500' => 'mes', 'Mapoly0002s0109' => 'mpo', 'Mapoly0024s0007' => 'mpo', 'Mapoly0089s0032' => 'mpo', 'MBI04_g42241_MAGBIO' => 'mbi', 'MBI05_g11988_MAGBIO' => 'mbi', 'MBI05_g35452_MAGBIO' => 'mbi', 'MBI07_g30179_MAGBIO' => 'mbi', 'MBI07_g35859_MAGBIO' => 'mbi', 'MBI07_g35860_MAGBIO' => 'mbi', 'MBI07_g37166_MAGBIO' => 'mbi', 'MBI08_g18172_MAGBIO' => 'mbi', 'MBI09_g08441_MAGBIO' => 'mbi', 'MBI13_g01676_MAGBIO' => 'mbi', 'MBI14_g42955_MAGBIO' => 'mbi', 'MBI16_g13161_MAGBIO' => 'mbi', 'MBI17_g27204_MAGBIO' => 'mbi', 'MBI19_g21595_MAGBIO' => 'mbi', 'MD00G1148400' => 'mdo', 'MD02G1301200' => 'mdo', 'MD03G1227800' => 'mdo', 'MD05G1041100' => 'mdo', 'MD05G1124800' => 'mdo', 'MD05G1284000' => 'mdo', 'MD05G1338800' => 'mdo', 'MD05G1338900' => 'mdo', 'MD07G1022800' => 'mdo', 'MD10G1047500' => 'mdo', 'MD10G1127500' => 'mdo', 'MD10G1262300' => 'mdo', 'MD10G1293800' => 'mdo', 'MD16G1074300' => 'mdo', 'Medtr1g021670' => 'mtr', 'Medtr1g096320' => 'mtr', 'Medtr2g013690' => 'mtr', 'Medtr2g019450' => 'mtr', 'Medtr2g085170' => 'mtr', 'Medtr4g088785' => 'mtr', 'Medtr8g055930' => 'mtr', 'Medtr8g085850' => 'mtr', 'MELO3C002605.2' => 'cme', 'MELO3C003891.2' => 'cme', 'MELO3C004012.2' => 'cme', 'MELO3C007134.2' => 'cme', 'MELO3C008118.2' => 'cme', 'MELO3C016700.2' => 'cme', 'MELO3C024127.2' => 'cme', 'MELO3C033361.2' => 'cme', 'MELO3C033362.2' => 'cme', 'Migut.C00430' => 'egut', 'Migut.C01246' => 'egut', 'Migut.E00101' => 'egut', 'Migut.H01486' => 'egut', 'Migut.H01939' => 'egut', 'Migut.K00360' => 'egut', 'Migut.M00910' => 'egut', 'Migut.M01139' => 'egut', 'Migut.N02677' => 'egut', 'MSTRG.13252' => 'ama', 'MSTRG.14701' => 'ama', 'MSTRG.1521' => 'ama', 'MSTRG.15884' => 'ama', 'MSTRG.16242' => 'ama', 'MSTRG.22285' => 'ama', 'MSTRG.22444' => 'ama', 'MSTRG.2349' => 'ama', 'MSTRG.26308' => 'ama', 'MSTRG.28296' => 'ama', 'MSTRG.9895' => 'ama', 'Nitab4.5_0000110g0060' => 'nta', 'Nitab4.5_0000420g0130' => 'nta', 'Nitab4.5_0000422g0030' => 'nta', 'Nitab4.5_0000560g0180' => 'nta', 'Nitab4.5_0000703g0100' => 'nta', 'Nitab4.5_0000786g0200' => 'nta', 'Nitab4.5_0001336g0020' => 'nta', 'Nitab4.5_0001796g0030' => 'nta', 'Nitab4.5_0003348g0060' => 'nta', 'Nitab4.5_0003698g0040' => 'nta', 'Nitab4.5_0003942g0090' => 'nta', 'Nitab4.5_0004775g0070' => 'nta', 'Nitab4.5_0004864g0030' => 'nta', 'Nitab4.5_0005615g0020' => 'nta', 'Nitab4.5_0009288g0030' => 'nta', 'Nitab4.5_0009341g0010' => 'nta', 'Nitab4.5_0009535g0010' => 'nta', 'Nn1g03995' => 'nnu', 'Nn1g04100' => 'nnu', 'Nn1g06530' => 'nnu', 'Nn3g16404' => 'nnu', 'Nn3g17212' => 'nnu', 'Nn3g20776' => 'nnu', 'Nn3g21923' => 'nnu', 'Nn5g27737' => 'nnu', 'Nn5g29461' => 'nnu', 'Nn7g38355' => 'nnu', 'Nn8g39873' => 'nnu', 'Oeu000548.2' => 'oeu', 'Oeu004672.1' => 'oeu', 'Oeu015605.2' => 'oeu', 'Oeu016092.1' => 'oeu', 'Oeu017879.3' => 'oeu', 'Oeu024910.1' => 'oeu', 'Oeu028965.1' => 'oeu', 'Oeu031269.1' => 'oeu', 'Oeu031270.1' => 'oeu', 'Oeu032535.1' => 'oeu', 'Oeu034151.1' => 'oeu', 'Oeu034152.1' => 'oeu', 'Oeu034588.2' => 'oeu', 'Oeu050846.1' => 'oeu', 'Oeu050849.2' => 'oeu', 'Oeu051063.2' => 'oeu', 'Oeu052368.1' => 'oeu', 'Oeu052370.1' => 'oeu', 'Os01g0210400' => 'osa', 'Os01g0304300' => 'osa', 'Os01g0749100' => 'osa', 'Os02g0745800' => 'osa', 'Os03g0769050' => 'osa', 'Os05g0531500' => 'osa', 'Os06g0724300' => 'osa', 'Os11g0198100' => 'osa', 'Peaxi162Scf00069g01425' => 'pax', 'Peaxi162Scf00280g00811' => 'pax', 'Peaxi162Scf00310g00615' => 'pax', 'Peaxi162Scf00362g00542' => 'pax', 'Peaxi162Scf00461g00310' => 'pax', 'Peaxi162Scf00530g00118' => 'pax', 'Peaxi162Scf00541g00057' => 'pax', 'Peaxi162Scf00661g00017' => 'pax', 'Peaxi162Scf00926g00027' => 'pax', 'Peaxi162Scf01064g00263' => 'pax', 'Peaxi162Scf01211g00135' => 'pax', 'PGR004G2336' => 'pgr', 'PGR042G0327' => 'pgr', 'PGR042G1957' => 'pgr', 'PGR042G2003' => 'pgr', 'PGR042G3929' => 'pgr', 'PGR083G1137' => 'pgr', 'PGR083G1364' => 'pgr', 'PGSC0003DMG400003381' => 'stu', 'PGSC0003DMG400003417' => 'stu', 'PGSC0003DMG400008981' => 'stu', 'PGSC0003DMG400012417' => 'stu', 'PGSC0003DMG400012823' => 'stu', 'PGSC0003DMG400016885' => 'stu', 'PGSC0003DMG400022812' => 'stu', 'PGSC0003DMG400029726' => 'stu', 'PGSC0003DMG401009243' => 'stu', 'PGSC0003DMG401031505' => 'stu', 'PGSC0003DMG402031505' => 'stu', 'Phvul.001G017600' => 'pvu', 'Phvul.002G193500' => 'pvu', 'Phvul.002G228900' => 'pvu', 'Phvul.002G236800' => 'pvu', 'Phvul.003G049500' => 'pvu', 'Phvul.005G072000' => 'pvu', 'Phvul.006G164800' => 'pvu', 'Phvul.006G185100' => 'pvu', 'Phvul.007G090000' => 'pvu', 'Potri.001G399800' => 'ptr', 'Potri.002G149900' => 'ptr', 'Potri.004G044100' => 'ptr', 'Potri.004G177600' => 'ptr', 'Potri.009G138000' => 'ptr', 'Potri.010G094000' => 'ptr', 'Potri.011G053000' => 'ptr', 'Potri.011G119300' => 'ptr', 'Potri.013G113700' => 'ptr', 'Potri.018G107800' => 'ptr', 'Potri.019G084100' => 'ptr', 'Pp3c14_23720' => 'ppa', 'Pp3c16_6340' => 'ppa', 'Pp3c23_13420' => 'ppa', 'Pp3c24_2740' => 'ppa', 'Pp3c25_860' => 'ppa', 'Pp3c8_21750' => 'ppa', 'Prupe.1G273000' => 'ppe', 'Prupe.1G273700' => 'ppe', 'Prupe.1G274100' => 'ppe', 'Prupe.2G023300' => 'ppe', 'Prupe.4G048000' => 'ppe', 'Prupe.4G080400' => 'ppe', 'Prupe.4G181200' => 'ppe', 'Prupe.8G056900' => 'ppe', 'Prupe.8G168700' => 'ppe', 'Psat1g189080' => 'psa', 'Psat1g204760' => 'psa', 'Psat4g175560' => 'psa', 'Psat4g177720' => 'psa', 'Psat5g244240' => 'psa', 'Psat6g010720' => 'psa', 'Psat6g187200' => 'psa', 'Psat7g072040' => 'psa', 'PSO017G3501' => 'pso', 'PSO063G2148' => 'pso', 'PSO063G5608' => 'pso', 'PSO210G6392' => 'pso', 'PSO541G2319' => 'pso', 'PSO541G2836' => 'pso', 'PSO541G4012' => 'pso', 'PSO541G6253' => 'pso', 'PSO675G0580' => 'pso', 'PSO675G0856' => 'pso', 'PSO675G5635' => 'pso', 'PSO675G9157' => 'pso', 'PSO832G1660' => 'pso', 'PSO832G1969' => 'pso', 'QL02p007186' => 'qlo', 'QL02p033904' => 'qlo', 'QL03p064391' => 'qlo', 'QL05p040593' => 'qlo', 'QL05p058242' => 'qlo', 'QL08p021825' => 'qlo', 'QL11p004981' => 'qlo', 'RcHm_v2.0_Chr1g0318301' => 'rch', 'RcHm_v2.0_Chr4g0418501' => 'rch', 'RcHm_v2.0_Chr4g0439971' => 'rch', 'RcHm_v2.0_Chr5g0008541' => 'rch', 'RcHm_v2.0_Chr5g0014101' => 'rch', 'RcHm_v2.0_Chr5g0014131' => 'rch', 'RcHm_v2.0_Chr5g0033621' => 'rch', 'RcHm_v2.0_Chr6g0272041' => 'rch', 'RcHm_v2.0_Chr6g0278831' => 'rch', 'Rhsim02G0130400' => 'rsi', 'Rhsim02G0171100' => 'rsi', 'Rhsim05G0053000' => 'rsi', 'Rhsim05G0053100' => 'rsi', 'Rhsim06G0096500' => 'rsi', 'Rhsim06G0096600' => 'rsi', 'Rhsim06G0199100' => 'rsi', 'Rhsim12G0062300' => 'rsi', 'Rhsim12G0062800' => 'rsi', 'Sabra02G0118600' => 'sbr', 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'Solyc03g079860.2' => 'sly', 'Solyc04g079770.3' => 'sly', 'Solyc05g007430.4' => 'sly', 'Solyc07g063150.3' => 'sly', 'Solyc08g016620.3' => 'sly', 'Solyc09g057590.3' => 'sly', 'Solyc09g057600.1' => 'sly', 'Solyc10g009050.3' => 'sly', 'Solyc11g017420.2' => 'sly', 'Sopen01g053810' => 'spe', 'Sopen02g023040' => 'spe', 'Sopen03g002440' => 'spe', 'Sopen04g033350' => 'spe', 'Sopen05g003310' => 'spe', 'Sopen07g004050' => 'spe', 'Sopen07g031340' => 'spe', 'Sopen08g006990' => 'spe', 'Sopen10g004830' => 'spe', 'Sopen11g009370' => 'spe', 'Sp1g24450' => 'spa', 'Sp1g29670' => 'spa', 'Sp1g39600' => 'spa', 'Sp2g11080' => 'spa', 'Sp2g13970' => 'spa', 'Sp4g16130' => 'spa', 'Sp6g13080' => 'spa', 'Sp7g37270' => 'spa', 'TAR371G0065' => 'tar', 'TAR376G0340' => 'tar', 'TAR376G0435' => 'tar', 'TAR381G0002' => 'tar', 'TAR381G1236' => 'tar', 'TAR624G0055' => 'tar', 'TAR624G0324' => 'tar', 'TAR624G0696' => 'tar', 'TAR624G0906' => 'tar', 'TAR625G0107' => 'tar', 'TAR626G0015' => 'tar', 'TAR626G1356' => 'tar', 'TAR627G0888' => 'tar', 'TAR628G0399' => 'tar', 'TAR628G1327' => 'tar', 'TAR629G2831' => 'tar', 'TAR629G2874' => 'tar', 'TAR633G1432' => 'tar', 'TAR633G2771' => 'tar', 'THA.LOC104803394' => 'tha', 'THA.LOC104805153' => 'tha', 'THA.LOC104806784' => 'tha', 'THA.LOC104810473' => 'tha', 'THA.LOC104813100' => 'tha', 'THA.LOC104814215' => 'tha', 'THA.LOC104815554' => 'tha', 'THA.LOC104820544' => 'tha', 'THA.LOC104824754' => 'tha', 'THA.LOC104827717' => 'tha', 'Thecc.02G031400' => 'tca', 'Thecc.02G055900' => 'tca', 'Thecc.02G350800' => 'tca', 'Thecc.06G150900' => 'tca', 'Thecc.06G186600' => 'tca', 'Thecc.07G089600' => 'tca', 'Thecc.08G020400' => 'tca', 'Thecc.08G182100' => 'tca', 'Thhalv10000873m.g' => 'esa', 'Thhalv10004185m.g' => 'esa', 'Thhalv10006981m.g' => 'esa', 'Thhalv10007204m.g' => 'esa', 'Thhalv10011374m.g' => 'esa', 'Thhalv10013482m.g' => 'esa', 'Thhalv10017801m.g' => 'esa', 'Thhalv10024983m.g' => 'esa', 'TPR.G12072' => 'tpr', 'TPR.G15769' => 'tpr', 'TPR.G16504' => 'tpr', 'TPR.G16506' => 'tpr', 'TPR.G24345' => 'tpr', 'TPR.G26666' => 'tpr', 'TPR.G27320' => 'tpr', 'TPR.G31819' => 'tpr', 'TPR.G38879' => 'tpr', 'TPR.G39015' => 'tpr', 'TPR.G8819' => 'tpr', 'TWI09G0924' => 'twi', 'TWI12G0811' => 'twi', 'TWI12G1294' => 'twi', 'TWI31G0150' => 'twi', 'TWI36G1262' => 'twi', 'TWI38G1287' => 'twi', 'TWI38G1633' => 'twi', 'TWI38G1982' => 'twi', 'TWI39G0116' => 'twi', 'TWI60G1011' => 'twi', 'TWI63G0171' => 'twi', 'TWI73G0839' => 'twi', 'TWI79G1511' => 'twi', 'unitig_0.g915' => 'ugi', 'unitig_0.g916' => 'ugi', 'unitig_21.g20219' => 'ugi', 'unitig_21.g20416' => 'ugi', 'unitig_578.g16132' => 'ugi', 'unitig_578.g16718' => 'ugi', 'unitig_62.g23481' => 'ugi', 'unitig_744.g24535' => 'ugi', 'unitig_749.g13525' => 'ugi', 'vmacro01248' => 'vma', 'vmacro02290' => 'vma', 'vmacro10946' => 'vma', 'vmacro11865' => 'vma', 'vmacro12493' => 'vma', 'vmacro17322' => 'vma', 'vmacro21599' => 'vma', 'vmacro23041' => 'vma', 'VMungo0251G0004' => 'vmu', 'VMungo0251G2639' => 'vmu', 'VMungo0251G2967' => 'vmu', 'VMungo0540G0864' => 'vmu', 'VMungo0540G1569' => 'vmu', 'VMungo0647G0317' => 'vmu', 'VMungo0720G1373' => 'vmu', 'VMungo0720G1508' => 'vmu', 'VMungo1080G0485' => 'vmu', 'VMungo1215G3177' => 'vmu', 'Zm00001eb112600' => 'zma', 'Zm00001eb120220' => 'zma', 'Zm00001eb153240' => 'zma', 'Zm00001eb168880' => 'zma', 'Zm00001eb213920' => 'zma', 'Zm00001eb228280' => 'zma', 'Zm00001eb254580' => 'zma', 'Zm00001eb272180' => 'zma', 'Zm00001eb293190' => 'zma', 'Zm00001eb322930' => 'zma', 'Zm00001eb353360' => 'zma', 'Zm00001eb353390' => 'zma', 'Zm00001eb353430' => 'zma', 'Zm00001eb353440' => 'zma', 'Zm00001eb353780' => 'zma' ), 'gf_id' => 'HOM05D000499', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000499' ), 'data_identifier' => 'HOM05D000499', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000499', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1066', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p29780' => 'bna', 'A02p33180' => 'bna', 'A03p16470' => 'bna', 'A03p66010' => 'bna', 'A04p25970' => 'bna', 'A06p01270' => 'bna', 'A06p46080' => 'bna', 'A07p11400' => 'bna', 'A08p01840' => 'bna', 'A08p08230' => 'bna', 'A08p25740' => 'bna', 'A09p32070' => 'bna', 'A09p37830' => 'bna', 'A09p42840' => 'bna', 'A09p42850' => 'bna', 'Aa31LG10G2060' => 'aar', 'Aa31LG2G7410' => 'aar', 'Aa31LG6G10200' => 'aar', 'Aa31LG6G16680' => 'aar', 'Aa31LG6G8470' => 'aar', 'Aa31LG9G12730' => 'aar', 'Aa31LG9G13680' => 'aar', 'Aa31LG9G14920' => 'aar', 'Aa31LG9G6650' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4977' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5467' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3254' => 'aag', 'Actinidia02578' => 'ach', 'Actinidia07693' => 'ach', 'Actinidia08413' => 'ach', 'Actinidia08414' => 'ach', 'Actinidia15289' => 'ach', 'Actinidia19871' => 'ach', 'Actinidia21475' => 'ach', 'Actinidia22576' => 'ach', 'Actinidia28327' => 'ach', 'Actinidia32491' => 'ach', 'Actinidia39463' => 'ach', 'Actinidia39571' => 'ach', 'Ah.01g013750' => 'amhyb', 'Ah.01g023210' => 'amhyb', 'Ah.04g164850' => 'amhyb', 'Ah.05g178060' => 'amhyb', 'Ah.07g204270' => 'amhyb', 'Ah.07g208480' => 'amhyb', 'Ah.09g237410' => 'amhyb', 'Ah.14g089460' => 'amhyb', 'AL1G41790' => 'aly', 'AL1G49050' => 'aly', 'AL1G53810' => 'aly', 'AL1G61400' => 'aly', 'AL4G18580' => 'aly', 'AL5G12510' => 'aly', 'AL5G12540' => 'aly', 'AL6G43230' => 'aly', 'AL7G10370' => 'aly', 'AL7G19250' => 'aly', 'AL8G12240' => 'aly', 'AL8G18540' => 'aly', 'Aqoxy1G02409' => 'aox', 'Aqoxy2G03993' => 'aox', 'Aqoxy3G03357' => 'aox', 'Aqoxy4G00785' => 'aox', 'Aqoxy5G02598' => 'aox', 'Aqoxy6G00132' => 'aox', 'Aqoxy7G01776' => 'aox', 'Aqoxy7G02316' => 'aox', 'Aqoxy7G03973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.12AFKW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B8730' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27IQR1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3F75VG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3RE0GA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41TCQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.527VTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FIR39' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5W8UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DA38EV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ63HS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H1I32C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HC27T5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4M8AP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7N3CZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9UVDZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LS1NQA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT1D4B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SKC4TM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCFV76' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF9Q1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQWD9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1ZM88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WE07RT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YCK7VH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJE6Q6' => 'arhy', 'AT1G28240' => 'ath', 'AT1G34550' => 'ath', 'AT1G53040' => 'ath', 'AT2G02910' => 'ath', 'AT4G09630' => 'ath', 'AT4G38500' => 'ath', 'AT5G42660' => 'ath', 'AT5G46220' => 'ath', 'ATR0152G026' => 'atr', 'ATR0564G343' => 'atr', 'ATR0706G151' => 'atr', 'ATR0733G207' => 'atr', 'ATR0751G234' => 'atr', 'ATR0807G048' => 'atr', 'ATR1091G084' => 'atr', 'Atru.chr10.1229' => 'acertr', 'Atru.chr10.1230' => 'acertr', 'Atru.chr10.1874' => 'acertr', 'Atru.chr11.1808' => 'acertr', 'Atru.chr13.1795' => 'acertr', 'Atru.chr13.570' => 'acertr', 'Atru.chr2.2608' => 'acertr', 'Atru.chr2.2609' => 'acertr', 'Atru.chr5.3428' => 'acertr', 'Atru.chr8.1171' => 'acertr', 'AUR62004651' => 'cqu', 'AUR62008675' => 'cqu', 'AUR62010014' => 'cqu', 'AUR62013004' => 'cqu', 'AUR62014825' => 'cqu', 'AUR62015015' => 'cqu', 'AUR62015151' => 'cqu', 'AUR62017020' => 'cqu', 'AUR62019422' => 'cqu', 'AUR62023570' => 'cqu', 'AUR62025571' => 'cqu', 'AUR62029098' => 'cqu', 'AUR62033863' => 'cqu', 'AUR62034296' => 'cqu', 'AUR62040075' => 'cqu', 'BcaB02g07334' => 'bca', 'BcaB02g10575' => 'bca', 'BcaB03g12119' => 'bca', 'BcaB03g12120' => 'bca', 'BcaB03g13945' => 'bca', 'BcaB04g17123' => 'bca', 'BcaB04g17867' => 'bca', 'BcaB04g19839' => 'bca', 'BcaB07g30317' => 'bca', 'BcaB07g32432' => 'bca', 'BcaB07g33362' => 'bca', 'BcaB08g36611' => 'bca', 'BcaC01g00028' => 'bca', 'BcaC01g01356' => 'bca', 'BcaC01g02034' => 'bca', 'BcaC01g06051' => 'bca', 'BcaC03g16839' => 'bca', 'BcaC03g17176' => 'bca', 'BcaC05g26829' => 'bca', 'BcaC06g31490' => 'bca', 'BcaC06g35344' => 'bca', 'BcaC06g36570' => 'bca', 'BcaC07g37537' => 'bca', 'BcaC08g43491' => 'bca', 'BcaC08g43773' => 'bca', 'BcaNung00234' => 'bca', 'BcaNung01982' => 'bca', 'BcaNung03707' => 'bca', 'BcaNung06454' => 'bca', 'BolC2t10762H' => 'bol', 'BolC2t11191H' => 'bol', 'BolC3t14322H' => 'bol', 'BolC3t19747H' => 'bol', 'BolC3t21425H' => 'bol', 'BolC4t27800H' => 'bol', 'BolC5t31423H' => 'bol', 'BolC6t35951H' => 'bol', 'BolC6t36282H' => 'bol', 'BolC7t40678H' => 'bol', 'BolC7t40679H' => 'bol', 'BolC7t42222H' => 'bol', 'BolC7t43492H' => 'bol', 'BolC7t46785H' => 'bol', 'BolC8t47853H' => 'bol', 'BolC9t56805H' => 'bol', 'BraA02t08000Z' => 'bra', 'BraA02t08341Z' => 'bra', 'BraA03t10936Z' => 'bra', 'BraA03t15657Z' => 'bra', 'BraA04t18100Z' => 'bra', 'BraA05t20523Z' => 'bra', 'BraA06t23353Z' => 'bra', 'BraA06t27473Z' => 'bra', 'BraA06t27769Z' => 'bra', 'BraA07t28928Z' => 'bra', 'BraA08t32236Z' => 'bra', 'BraA08t32841Z' => 'bra', 'BraA08t34524Z' => 'bra', 'BraA09t38742Z' => 'bra', 'BraA09t39295Z' => 'bra', 'C02p47180' => 'bna', 'C02p50990' => 'bna', 'C03p19360' => 'bna', 'C03p74950' => 'bna', 'C03p91000' => 'bna', 'C04p63260' => 'bna', 'C05p27050' => 'bna', 'C06p08750' => 'bna', 'C06p11490' => 'bna', 'C07p02820' => 'bna', 'C07p17180' => 'bna', 'C07p29440' => 'bna', 'C07p63730' => 'bna', 'C09p39260' => 'bna', 'CAN.G1164.34' => 'can', 'CAN.G1164.39' => 'can', 'CAN.G1530.3' => 'can', 'CAN.G162.61' => 'can', 'CAN.G176.6' => 'can', 'CAN.G289.49' => 'can', 'CAN.G370.21' => 'can', 'CAN.G370.22' => 'can', 'CAN.G371.117' => 'can', 'CAN.G58.37' => 'can', 'CAN.G588.98' => 'can', 'CANSAT21G2266' => 'cansat', 'CANSAT25G2799' => 'cansat', 'CANSAT35G0862' => 'cansat', 'CANSAT35G1704' => 'cansat', 'CANSAT35G1760' => 'cansat', 'CANSAT56G3971' => 'cansat', 'CANSAT56G4116' => 'cansat', 'CANSAT80G1259' => 'cansat', 'CARHR027730' => 'chi', 'CARHR033880' => 'chi', 'CARHR043270' => 'chi', 'CARHR145330' => 'chi', 'CARHR145340' => 'chi', 'CARHR175570' => 'chi', 'CARHR181570' => 'chi', 'CARHR258470' => 'chi', 'CARHR260490' => 'chi', 'CARHR294220' => 'chi', 'Carub.0001s2668' => 'cru', 'Carub.0001s3257' => 'cru', 'Carub.0001s4220' => 'cru', 'Carub.0005s0179' => 'cru', 'Carub.0006s2807' => 'cru', 'Carub.0007s0039' => 'cru', 'Carub.0008s0169' => 'cru', 'Carub.0008s0636' => 'cru', 'Ca_00338_v3' => 'car', 'Ca_00542_v3' => 'car', 'Ca_01844_v3' => 'car', 'Ca_10611_v3' => 'car', 'Ca_13326_v3' => 'car', 'Ca_17944_v3' => 'car', 'Ca_18546_v3' => 'car', 'Ca_24219_v3' => 'car', 'Ca_29972_v3' => 'car', 'CBR_g3681' => 'cbr', 'CBR_g40021' => 'cbr', 'Cc01_g08140' => 'ccan', 'Cc02_g13410' => 'ccan', 'Cc02_g37480' => 'ccan', 'Cc05_g12030' => 'ccan', 'Cc09_g03370' => 'ccan', 'Cc09_g10300' => 'ccan', 'Cc10_g03530' => 'ccan', 'Cc10_g11380' => 'ccan', 'CDE01G0176' => 'cde', 'CDE02G0675' => 'cde', 'CDE02G0942' => 'cde', 'CDE02G1153' => 'cde', 'CDE02G4177' => 'cde', 'CDE04G2117' => 'cde', 'CDE04G2736' => 'cde', 'CDE08G1161' => 'cde', 'CDE09G1238' => 'cde', 'Cfa000467' => 'cfa', 'Cfa000947' => 'cfa', 'Cfa004969' => 'cfa', 'Cfa005284' => 'cfa', 'Cfa008993' => 'cfa', 'Cfa018187' => 'cfa', 'Cfa018454' => 'cfa', 'Cfa020585' => 'cfa', 'Ciclev10000424m.g' => 'ccl', 'Ciclev10003605m.g' => 'ccl', 'Ciclev10007828m.g' => 'ccl', 'Ciclev10014620m.g' => 'ccl', 'Ciclev10015169m.g' => 'ccl', 'Ciclev10018291m.g' => 'ccl', 'Ciclev10028256m.g' => 'ccl', 'Ciclev10033822m.g' => 'ccl', 'CiPaw.05G060300' => 'cil', 'CiPaw.05G085000' => 'cil', 'CiPaw.06G083700' => 'cil', 'CiPaw.06G120300' => 'cil', 'CiPaw.09G060500' => 'cil', 'CiPaw.09G123800' => 'cil', 'CiPaw.11G169700' => 'cil', 'CiPaw.12G118300' => 'cil', 'CiPaw.15G071000' => 'cil', 'CiPaw.15G081900' => 'cil', 'ClCG01G024610' => 'cla', 'ClCG03G006070' => 'cla', 'ClCG05G019250' => 'cla', 'ClCG09G009500' => 'cla', 'ClCG11G008200' => 'cla', 'ClCG11G018080' => 'cla', 'COL.COLO4_17373' => 'col', 'COL.COLO4_22994' => 'col', 'COL.COLO4_26389' => 'col', 'COL.COLO4_27170' => 'col', 'COL.COLO4_31074' => 'col', 'COL.COLO4_31465' => 'col', 'COL.COLO4_36438' => 'col', 'COL.COLO4_36439' => 'col', 'Cpa.g.c38781' => 'cpa', 'Cpa.g.sc128.12' => 'cpa', 'Cpa.g.sc166.7' => 'cpa', 'Cpa.g.sc166.8' => 'cpa', 'Cpa.g.sc20.111' => 'cpa', 'Cpa.g.sc27.31' => 'cpa', 'Cpa.g.sc64.36' => 'cpa', 'Cpa.g.sc64.37' => 'cpa', 'Cpa.g.sc66.49' => 'cpa', 'Cpa.g.sc80.64' => 'cpa', 'CsaV3_1G012320' => 'csa', 'CsaV3_2G008480' => 'csa', 'CsaV3_2G033450' => 'csa', 'CsaV3_3G044830' => 'csa', 'CsaV3_4G033710' => 'csa', 'CsaV3_6G051730' => 'csa', 'CsaV3_7G025350' => 'csa', 'CSS0001067' => 'camsi', 'CSS0005996' => 'camsi', 'CSS0006590' => 'camsi', 'CSS0009673' => 'camsi', 'CSS0010201' => 'camsi', 'CSS0010549' => 'camsi', 'CSS0011364' => 'camsi', 'CSS0014473' => 'camsi', 'CSS0014961' => 'camsi', 'CSS0020191' => 'camsi', 'CSS0021165' => 'camsi', 'CSS0022306' => 'camsi', 'CSS0030591' => 'camsi', 'CSS0030696' => 'camsi', 'CSS0032653' => 'camsi', 'CSS0037487' => 'camsi', 'CSS0041102' => 'camsi', 'CSS0041261' => 'camsi', 'CSS0046246' => 'camsi', 'CSS0049256' => 'camsi', 'DCAR_004075' => 'dca', 'DCAR_011538' => 'dca', 'DCAR_019553' => 'dca', 'DCAR_020952' => 'dca', 'DCAR_021739' => 'dca', 'DCAR_027407' => 'dca', 'DCAR_027913' => 'dca', 'DCAR_028066' => 'dca', 'Dinv05899' => 'din', 'Dinv07563' => 'din', 'Dinv08010' => 'din', 'Dinv14125' => 'din', 'Dinv20172' => 'din', 'Dinv30743' => 'din', 'Dinv31229' => 'din', 'Dinv34162' => 'din', 'Dinv36028' => 'din', 'Dinv39368' => 'din', 'Dinv40565' => 'din', 'Dinv41706' => 'din', 'Duzib052G0089' => 'dzi', 'Duzib116G0641' => 'dzi', 'Duzib132G0069' => 'dzi', 'Duzib132G1219' => 'dzi', 'Duzib147G0278' => 'dzi', 'Duzib160G0480' => 'dzi', 'Duzib170G0661' => 'dzi', 'Duzib177G0591' => 'dzi', 'Duzib187G1353' => 'dzi', 'Duzib192G0858' => 'dzi', 'Duzib192G0883' => 'dzi', 'Duzib213G0506' => 'dzi', 'Duzib235G0289' => 'dzi', 'Duzib251G0422' => 'dzi', 'ECA232G3898' => 'eca', 'ECA233G5950' => 'eca', 'ECA234G1699' => 'eca', 'ECA234G2421' => 'eca', 'ECA236G0426' => 'eca', 'ECA236G4331' => 'eca', 'ECA248G2573' => 'eca', 'EL10Ac1g00077' => 'bvu', 'EL10Ac1g01746' => 'bvu', 'EL10Ac2g03464' => 'bvu', 'EL10Ac4g08176' => 'bvu', 'EL10Ac7g17521' => 'bvu', 'EL10Ac8g20386' => 'bvu', 'EL10Ac9g21343' => 'bvu', 'EL10Ac9g22688' => 'bvu', 'Eucgr.B03434' => 'egr', 'Eucgr.D00618' => 'egr', 'Eucgr.E02395' => 'egr', 'Eucgr.F01129' => 'egr', 'Eucgr.F02622' => 'egr', 'Eucgr.F04207' => 'egr', 'FAN01G0570' => 'fan', 'FAN03G3351' => 'fan', 'FAN06G3702' => 'fan', 'FAN07G2149' => 'fan', 'FAN10G3758' => 'fan', 'FAN11G1170' => 'fan', 'FAN11G2050' => 'fan', 'FAN11G2724' => 'fan', 'FAN12G1700' => 'fan', 'FAN12G2028' => 'fan', 'FAN15G1160' => 'fan', 'FAN15G3063' => 'fan', 'FAN16G2540' => 'fan', 'FAN16G3077' => 'fan', 'FAN16G3624' => 'fan', 'FAN17G0221' => 'fan', 'FAN20G2492' => 'fan', 'FAN20G2905' => 'fan', 'FAN21G0548' => 'fan', 'FAN21G1300' => 'fan', 'FAN22G0077' => 'fan', 'FAN22G1315' => 'fan', 'FAN24G1280' => 'fan', 'FAN24G1445' => 'fan', 'FAN24G3527' => 'fan', 'FAN25G0464' => 'fan', 'FAN25G2885' => 'fan', 'FAN25G3270' => 'fan', 'FAN27G1101' => 'fan', 'FAN27G2846' => 'fan', 'FAN27G3524' => 'fan', 'FvH4_2g11770' => 'fve', 'FvH4_2g15630' => 'fve', 'FvH4_3g05570' => 'fve', 'FvH4_3g09110' => 'fve', 'FvH4_3g19940' => 'fve', 'FvH4_4g04821' => 'fve', 'FvH4_4g31480' => 'fve', 'FvH4_7g01740' => 'fve', 'Glyma.05G130400' => 'gma', 'Glyma.05G156400' => 'gma', 'Glyma.07G197000' => 'gma', 'Glyma.08G085151' => 'gma', 'Glyma.08G114500' => 'gma', 'Glyma.08G300400' => 'gma', 'Glyma.10G215800' => 'gma', 'Glyma.12G224400' => 'gma', 'Glyma.13G179300' => 'gma', 'Glyma.13G218151' => 'gma', 'Glyma.13G238800' => 'gma', 'Glyma.13G276900' => 'gma', 'Glyma.14G078200' => 'gma', 'Glyma.15G074500' => 'gma', 'Glyma.15G094100' => 'gma', 'Glyma.17G247200' => 'gma', 'Glyma.18G120100' => 'gma', 'Glyma.20G176000' => 'gma', 'Gohir.A01G063600' => 'ghi', 'Gohir.A01G170301' => 'ghi', 'Gohir.A02G060500' => 'ghi', 'Gohir.A05G133850' => 'ghi', 'Gohir.A05G161400' => 'ghi', 'Gohir.A06G012900' => 'ghi', 'Gohir.A06G035901' => 'ghi', 'Gohir.A06G127100' => 'ghi', 'Gohir.A06G210500' => 'ghi', 'Gohir.A08G008650' => 'ghi', 'Gohir.A09G072700' => 'ghi', 'Gohir.A09G088301' => 'ghi', 'Gohir.A10G040600' => 'ghi', 'Gohir.A12G036300' => 'ghi', 'Gohir.A12G143350' => 'ghi', 'Gohir.A12G165500' => 'ghi', 'Gohir.A13G145700' => 'ghi', 'Gohir.D01G050000' => 'ghi', 'Gohir.D01G051366' => 'ghi', 'Gohir.D01G161350' => 'ghi', 'Gohir.D02G065900' => 'ghi', 'Gohir.D05G164200' => 'ghi', 'Gohir.D05G355500' => 'ghi', 'Gohir.D06G010400' => 'ghi', 'Gohir.D06G111250' => 'ghi', 'Gohir.D06G132000' => 'ghi', 'Gohir.D06G210500' => 'ghi', 'Gohir.D07G165675' => 'ghi', 'Gohir.D08G062240' => 'ghi', 'Gohir.D08G086101' => 'ghi', 'Gohir.D08G138060' => 'ghi', 'Gohir.D09G072300' => 'ghi', 'Gohir.D10G041400' => 'ghi', 'Gohir.D11G191020' => 'ghi', 'Gohir.D11G212066' => 'ghi', 'Gohir.D12G036300' => 'ghi', 'Gohir.D12G168600' => 'ghi', 'Gohir.D13G150600' => 'ghi', 'Gorai.001G057300' => 'gra', 'Gorai.002G069900' => 'gra', 'Gorai.002G200000' => 'gra', 'Gorai.003G067600' => 'gra', 'Gorai.005G074800' => 'gra', 'Gorai.006G087300' => 'gra', 'Gorai.008G037500' => 'gra', 'Gorai.008G181400' => 'gra', 'Gorai.009G169400' => 'gra', 'Gorai.009G387900' => 'gra', 'Gorai.010G013300' => 'gra', 'Gorai.010G153800' => 'gra', 'Gorai.010G255800' => 'gra', 'Gorai.011G043700' => 'gra', 'Gorai.011G198900' => 'gra', 'Gorai.013G168400' => 'gra', 'GSVIVG01005212001' => 'vvi', 'GSVIVG01006163001' => 'vvi', 'GSVIVG01009625001' => 'vvi', 'GSVIVG01014338001' => 'vvi', 'GSVIVG01020005001' => 'vvi', 'GSVIVG01021450001' => 'vvi', 'GSVIVG01023975001' => 'vvi', 'GSVIVG01034490001' => 'vvi', 'HanXRQChr04g0112071' => 'han', 'HanXRQChr05g0131151' => 'han', 'HanXRQChr09g0262371' => 'han', 'HanXRQChr09g0268401' => 'han', 'HanXRQChr10g0279241' => 'han', 'HanXRQChr10g0297961' => 'han', 'HanXRQChr11g0326231' => 'han', 'HanXRQChr11g0328471' => 'han', 'HanXRQChr16g0507941' => 'han', 'HanXRQChr17g0560211' => 'han', 'Haze_02108' => 'cav', 'Haze_02428' => 'cav', 'Haze_05593' => 'cav', 'Haze_06448' => 'cav', 'Haze_09427' => 'cav', 'Haze_12022' => 'cav', 'Haze_17612' => 'cav', 'Haze_17928' => 'cav', 'Hma1.2p1_0032F.1_g019250' => 'hma', 'Hma1.2p1_0163F.1_g072690' => 'hma', 'Hma1.2p1_0265F.1_g106710' => 'hma', 'Hma1.2p1_0286F.1_g113970' => 'hma', 'Hma1.2p1_0363F.1_g136640' => 'hma', 'Hma1.2p1_0584F.1_g183470' => 'hma', 'Hma1.2p1_0885F.1_g232570' => 'hma', 'HPP92_006022' => 'vpl', 'HPP92_007320' => 'vpl', 'HPP92_011521' => 'vpl', 'HPP92_019387' => 'vpl', 'HPP92_024038' => 'vpl', 'Hund05891' => 'sun', 'Hund06450' => 'sun', 'Hund12053' => 'sun', 'Hund16800' => 'sun', 'Hund21222' => 'sun', 'Hund22896' => 'sun', 'Hund23746' => 'sun', 'Hund27083' => 'sun', 'Lalb_Chr02g0141831' => 'lal', 'Lalb_Chr02g0141841' => 'lal', 'Lalb_Chr05g0220411' => 'lal', 'Lalb_Chr06g0162081' => 'lal', 'Lalb_Chr09g0327651' => 'lal', 'Lalb_Chr13g0295051' => 'lal', 'Lalb_Chr15g0086801' => 'lal', 'Lalb_Chr16g0383781' => 'lal', 'Lalb_Chr16g0383791' => 'lal', 'Lalb_Chr18g0055441' => 'lal', 'Lalb_Chr18g0059611' => 'lal', 'Lalb_Chr20g0109661' => 'lal', 'Lalb_Chr20g0109831' => 'lal', 'Lalb_Chr20g0121871' => 'lal', 'Lalb_Chr22g0355361' => 'lal', 'Lalb_Chr25g0286371' => 'lal', 'Lj1A1187G43' => 'lonja', 'Lj1A1205T50' => 'lonja', 'Lj1A800G33' => 'lonja', 'Lj1C1187T7' => 'lonja', 'Lj1C843T11' => 'lonja', 'Lj1g0010940' => 'lja', 'Lj2A288T69' => 'lonja', 'Lj3g0024276' => 'lja', 'Lj4A47T76' => 'lonja', 'Lj4g0005805' => 'lja', 'Lj4g0006097' => 'lja', 'Lj4g0008528' => 'lja', 'Lj4g0024907' => 'lja', 'Lj5g0012472' => 'lja', 'Lj5g0018648' => 'lja', 'Lj6C789G1' => 'lonja', 'Lj6g0004000' => 'lja', 'Lj7A292G67' => 'lonja', 'Lj7A292T64' => 'lonja', 'Lj9A400T58' => 'lonja', 'Lsat_1_v5_gn_1_126181' => 'lsa', 'Lsat_1_v5_gn_4_123041' => 'lsa', 'Lsat_1_v5_gn_4_133620' => 'lsa', 'Lsat_1_v5_gn_4_53221' => 'lsa', 'Lsat_1_v5_gn_4_71961' => 'lsa', 'Lsat_1_v5_gn_7_105241' => 'lsa', 'Lsat_1_v5_gn_7_21361' => 'lsa', 'Lsat_1_v5_gn_7_28860' => 'lsa', 'Lsat_1_v5_gn_7_31260' => 'lsa', 'Lsat_1_v5_gn_8_52801' => 'lsa', 'Manes.02G191400' => 'mes', 'Manes.03G110100' => 'mes', 'Manes.04G071100' => 'mes', 'Manes.05G100500' => 'mes', 'Manes.05G164700' => 'mes', 'Manes.15G087000' => 'mes', 'Manes.15G121500' => 'mes', 'Manes.16G028300' => 'mes', 'Manes.17G046100' => 'mes', 'Manes.17G069800' => 'mes', 'Manes.18G100500' => 'mes', 'Mapoly0002s0109' => 'mpo', 'Mapoly0024s0007' => 'mpo', 'Mapoly0089s0032' => 'mpo', 'MBI04_g42241_MAGBIO' => 'mbi', 'MBI05_g11988_MAGBIO' => 'mbi', 'MBI05_g35452_MAGBIO' => 'mbi', 'MBI07_g30179_MAGBIO' => 'mbi', 'MBI07_g35859_MAGBIO' => 'mbi', 'MBI07_g35860_MAGBIO' => 'mbi', 'MBI07_g37166_MAGBIO' => 'mbi', 'MBI08_g18172_MAGBIO' => 'mbi', 'MBI09_g08441_MAGBIO' => 'mbi', 'MBI13_g01676_MAGBIO' => 'mbi', 'MBI14_g42955_MAGBIO' => 'mbi', 'MBI16_g13161_MAGBIO' => 'mbi', 'MBI17_g27204_MAGBIO' => 'mbi', 'MBI19_g21595_MAGBIO' => 'mbi', 'MD00G1148400' => 'mdo', 'MD02G1301200' => 'mdo', 'MD03G1227800' => 'mdo', 'MD05G1041100' => 'mdo', 'MD05G1124800' => 'mdo', 'MD05G1284000' => 'mdo', 'MD05G1338800' => 'mdo', 'MD05G1338900' => 'mdo', 'MD07G1022800' => 'mdo', 'MD10G1047500' => 'mdo', 'MD10G1127500' => 'mdo', 'MD10G1262300' => 'mdo', 'MD10G1293800' => 'mdo', 'MD16G1074300' => 'mdo', 'Medtr1g021670' => 'mtr', 'Medtr1g096320' => 'mtr', 'Medtr2g013690' => 'mtr', 'Medtr2g019450' => 'mtr', 'Medtr2g085170' => 'mtr', 'Medtr4g088785' => 'mtr', 'Medtr8g055930' => 'mtr', 'Medtr8g085850' => 'mtr', 'MELO3C002605.2' => 'cme', 'MELO3C003891.2' => 'cme', 'MELO3C004012.2' => 'cme', 'MELO3C007134.2' => 'cme', 'MELO3C008118.2' => 'cme', 'MELO3C016700.2' => 'cme', 'MELO3C024127.2' => 'cme', 'MELO3C033361.2' => 'cme', 'MELO3C033362.2' => 'cme', 'Migut.C00430' => 'egut', 'Migut.C01246' => 'egut', 'Migut.E00101' => 'egut', 'Migut.H01486' => 'egut', 'Migut.H01939' => 'egut', 'Migut.K00360' => 'egut', 'Migut.M00910' => 'egut', 'Migut.M01139' => 'egut', 'Migut.N02677' => 'egut', 'MSTRG.13252' => 'ama', 'MSTRG.14701' => 'ama', 'MSTRG.1521' => 'ama', 'MSTRG.15884' => 'ama', 'MSTRG.16242' => 'ama', 'MSTRG.22285' => 'ama', 'MSTRG.22444' => 'ama', 'MSTRG.2349' => 'ama', 'MSTRG.26308' => 'ama', 'MSTRG.28296' => 'ama', 'MSTRG.9895' => 'ama', 'Nitab4.5_0000110g0060' => 'nta', 'Nitab4.5_0000420g0130' => 'nta', 'Nitab4.5_0000422g0030' => 'nta', 'Nitab4.5_0000560g0180' => 'nta', 'Nitab4.5_0000703g0100' => 'nta', 'Nitab4.5_0000786g0200' => 'nta', 'Nitab4.5_0001336g0020' => 'nta', 'Nitab4.5_0001796g0030' => 'nta', 'Nitab4.5_0003348g0060' => 'nta', 'Nitab4.5_0003698g0040' => 'nta', 'Nitab4.5_0003942g0090' => 'nta', 'Nitab4.5_0004775g0070' => 'nta', 'Nitab4.5_0004864g0030' => 'nta', 'Nitab4.5_0005615g0020' => 'nta', 'Nitab4.5_0009288g0030' => 'nta', 'Nitab4.5_0009341g0010' => 'nta', 'Nitab4.5_0009535g0010' => 'nta', 'Nn1g03995' => 'nnu', 'Nn1g04100' => 'nnu', 'Nn1g06530' => 'nnu', 'Nn3g16404' => 'nnu', 'Nn3g17212' => 'nnu', 'Nn3g20776' => 'nnu', 'Nn3g21923' => 'nnu', 'Nn5g27737' => 'nnu', 'Nn5g29461' => 'nnu', 'Nn7g38355' => 'nnu', 'Nn8g39873' => 'nnu', 'Oeu000548.2' => 'oeu', 'Oeu004672.1' => 'oeu', 'Oeu015605.2' => 'oeu', 'Oeu016092.1' => 'oeu', 'Oeu017879.3' => 'oeu', 'Oeu024910.1' => 'oeu', 'Oeu028965.1' => 'oeu', 'Oeu031269.1' => 'oeu', 'Oeu031270.1' => 'oeu', 'Oeu032535.1' => 'oeu', 'Oeu034151.1' => 'oeu', 'Oeu034152.1' => 'oeu', 'Oeu034588.2' => 'oeu', 'Oeu050846.1' => 'oeu', 'Oeu050849.2' => 'oeu', 'Oeu051063.2' => 'oeu', 'Oeu052368.1' => 'oeu', 'Oeu052370.1' => 'oeu', 'Os01g0210400' => 'osa', 'Os01g0304300' => 'osa', 'Os01g0749100' => 'osa', 'Os02g0745800' => 'osa', 'Os03g0769050' => 'osa', 'Os05g0531500' => 'osa', 'Os06g0724300' => 'osa', 'Os11g0198100' => 'osa', 'Peaxi162Scf00069g01425' => 'pax', 'Peaxi162Scf00280g00811' => 'pax', 'Peaxi162Scf00310g00615' => 'pax', 'Peaxi162Scf00362g00542' => 'pax', 'Peaxi162Scf00461g00310' => 'pax', 'Peaxi162Scf00530g00118' => 'pax', 'Peaxi162Scf00541g00057' => 'pax', 'Peaxi162Scf00661g00017' => 'pax', 'Peaxi162Scf00926g00027' => 'pax', 'Peaxi162Scf01064g00263' => 'pax', 'Peaxi162Scf01211g00135' => 'pax', 'PGR004G2336' => 'pgr', 'PGR042G0327' => 'pgr', 'PGR042G1957' => 'pgr', 'PGR042G2003' => 'pgr', 'PGR042G3929' => 'pgr', 'PGR083G1137' => 'pgr', 'PGR083G1364' => 'pgr', 'PGSC0003DMG400003381' => 'stu', 'PGSC0003DMG400003417' => 'stu', 'PGSC0003DMG400008981' => 'stu', 'PGSC0003DMG400012417' => 'stu', 'PGSC0003DMG400012823' => 'stu', 'PGSC0003DMG400016885' => 'stu', 'PGSC0003DMG400022812' => 'stu', 'PGSC0003DMG400029726' => 'stu', 'PGSC0003DMG401009243' => 'stu', 'PGSC0003DMG401031505' => 'stu', 'PGSC0003DMG402031505' => 'stu', 'Phvul.001G017600' => 'pvu', 'Phvul.002G193500' => 'pvu', 'Phvul.002G228900' => 'pvu', 'Phvul.002G236800' => 'pvu', 'Phvul.003G049500' => 'pvu', 'Phvul.005G072000' => 'pvu', 'Phvul.006G164800' => 'pvu', 'Phvul.006G185100' => 'pvu', 'Phvul.007G090000' => 'pvu', 'Potri.001G399800' => 'ptr', 'Potri.002G149900' => 'ptr', 'Potri.004G044100' => 'ptr', 'Potri.004G177600' => 'ptr', 'Potri.009G138000' => 'ptr', 'Potri.010G094000' => 'ptr', 'Potri.011G053000' => 'ptr', 'Potri.011G119300' => 'ptr', 'Potri.013G113700' => 'ptr', 'Potri.018G107800' => 'ptr', 'Potri.019G084100' => 'ptr', 'Pp3c14_23720' => 'ppa', 'Pp3c16_6340' => 'ppa', 'Pp3c23_13420' => 'ppa', 'Pp3c24_2740' => 'ppa', 'Pp3c25_860' => 'ppa', 'Pp3c8_21750' => 'ppa', 'Prupe.1G273000' => 'ppe', 'Prupe.1G273700' => 'ppe', 'Prupe.1G274100' => 'ppe', 'Prupe.2G023300' => 'ppe', 'Prupe.4G048000' => 'ppe', 'Prupe.4G080400' => 'ppe', 'Prupe.4G181200' => 'ppe', 'Prupe.8G056900' => 'ppe', 'Prupe.8G168700' => 'ppe', 'Psat1g189080' => 'psa', 'Psat1g204760' => 'psa', 'Psat4g175560' => 'psa', 'Psat4g177720' => 'psa', 'Psat5g244240' => 'psa', 'Psat6g010720' => 'psa', 'Psat6g187200' => 'psa', 'Psat7g072040' => 'psa', 'PSO017G3501' => 'pso', 'PSO063G2148' => 'pso', 'PSO063G5608' => 'pso', 'PSO210G6392' => 'pso', 'PSO541G2319' => 'pso', 'PSO541G2836' => 'pso', 'PSO541G4012' => 'pso', 'PSO541G6253' => 'pso', 'PSO675G0580' => 'pso', 'PSO675G0856' => 'pso', 'PSO675G5635' => 'pso', 'PSO675G9157' => 'pso', 'PSO832G1660' => 'pso', 'PSO832G1969' => 'pso', 'QL02p007186' => 'qlo', 'QL02p033904' => 'qlo', 'QL03p064391' => 'qlo', 'QL05p040593' => 'qlo', 'QL05p058242' => 'qlo', 'QL08p021825' => 'qlo', 'QL11p004981' => 'qlo', 'RcHm_v2.0_Chr1g0318301' => 'rch', 'RcHm_v2.0_Chr4g0418501' => 'rch', 'RcHm_v2.0_Chr4g0439971' => 'rch', 'RcHm_v2.0_Chr5g0008541' => 'rch', 'RcHm_v2.0_Chr5g0014101' => 'rch', 'RcHm_v2.0_Chr5g0014131' => 'rch', 'RcHm_v2.0_Chr5g0033621' => 'rch', 'RcHm_v2.0_Chr6g0272041' => 'rch', 'RcHm_v2.0_Chr6g0278831' => 'rch', 'Rhsim02G0130400' => 'rsi', 'Rhsim02G0171100' => 'rsi', 'Rhsim05G0053000' => 'rsi', 'Rhsim05G0053100' => 'rsi', 'Rhsim06G0096500' => 'rsi', 'Rhsim06G0096600' => 'rsi', 'Rhsim06G0199100' => 'rsi', 'Rhsim12G0062300' => 'rsi', 'Rhsim12G0062800' => 'rsi', 'Sabra02G0118600' => 'sbr', 'Sabra04G0027300' => 'sbr', 'Sabra04G0119500' => 'sbr', 'Sabra08G0112500' => 'sbr', 'Sabra11G0036800' => 'sbr', 'Sabra11G0103800' => 'sbr', 'Sabra13G0096300' => 'sbr', 'Sabra16G0262300' => 'sbr', 'Sabra18G0091700' => 'sbr', 'Sabra19G0095400' => 'sbr', 'SalBow6G3080' => 'sbo', 'SalBow7G1157' => 'sbo', 'SalBow7G2123' => 'sbo', 'SalBow7G2285' => 'sbo', 'SalBow7G3537' => 'sbo', 'SalBow8G2947' => 'sbo', 'SalBow8G4463' => 'sbo', 'SalBow8G5466' => 'sbo', 'Sc01g0001750' => 'sci', 'Sc02g0006640' => 'sci', 'Sc02g0006670' => 'sci', 'Sc04g0008220' => 'sci', 'Sc05g0006190' => 'sci', 'Sc08g0002760' => 'sci', 'Sc17g0006170' => 'sci', 'Sc22g0002050' => 'sci', 'Sc23g0001190' => 'sci', 'Sc24g0000980' => 'sci', 'Sed0006245' => 'sed', 'Sed0007543' => 'sed', 'Sed0009411' => 'sed', 'Sed0010765' => 'sed', 'Sed0012944' => 'sed', 'Sed0014682' => 'sed', 'Sed0016174' => 'sed', 'Sed0016796' => 'sed', 'Sed0020317' => 'sed', 'Sed0021467' => 'sed', 'SEGI_01316' => 'sgi', 'SEGI_03374' => 'sgi', 'SEGI_16265' => 'sgi', 'SEGI_18569' => 'sgi', 'SEGI_20351' => 'sgi', 'SEGI_26395' => 'sgi', 'SEGI_29469' => 'sgi', 'SEGI_34771' => 'sgi', 'SEGI_36769' => 'sgi', 'SEGI_37139' => 'sgi', 'SGA_v2.0_scaffold100G29687' => 'sas', 'SGA_v2.0_scaffold118G32472' => 'sas', 'SGA_v2.0_scaffold14G07051' => 'sas', 'SGA_v2.0_scaffold183G39845' => 'sas', 'SGA_v2.0_scaffold1G00174' => 'sas', 'SGA_v2.0_scaffold22G09714' => 'sas', 'SGA_v2.0_scaffold333G48992' => 'sas', 'SGA_v2.0_scaffold46G17491' => 'sas', 'SGA_v2.0_scaffold49G18294' => 'sas', 'SGA_v2.0_scaffold63G21658' => 'sas', 'SHI01741' => 'shi', 'SHI05771' => 'shi', 'SHI18077' => 'shi', 'SHI20525' => 'shi', 'SHI20527' => 'shi', 'SHI20528' => 'shi', 'SMO172G0185' => 'smo', 'SMO198G0020' => 'smo', 'SMO351G0006' => 'smo', 'SMO356G0118' => 'smo', 'SMO358G0296' => 'smo', 'SMO367G0079' => 'smo', 'SMO367G1277' => 'smo', 'Solyc01g014220.3' => 'sly', 'Solyc01g111770.2' => 'sly', 'Solyc02g078180.3' => 'sly', 'Solyc03g006430.3' => 'sly', 'Solyc03g006456.1' => 'sly', 'Solyc03g079860.2' => 'sly', 'Solyc04g079770.3' => 'sly', 'Solyc05g007430.4' => 'sly', 'Solyc07g063150.3' => 'sly', 'Solyc08g016620.3' => 'sly', 'Solyc09g057590.3' => 'sly', 'Solyc09g057600.1' => 'sly', 'Solyc10g009050.3' => 'sly', 'Solyc11g017420.2' => 'sly', 'Sopen01g053810' => 'spe', 'Sopen02g023040' => 'spe', 'Sopen03g002440' => 'spe', 'Sopen04g033350' => 'spe', 'Sopen05g003310' => 'spe', 'Sopen07g004050' => 'spe', 'Sopen07g031340' => 'spe', 'Sopen08g006990' => 'spe', 'Sopen10g004830' => 'spe', 'Sopen11g009370' => 'spe', 'Sp1g24450' => 'spa', 'Sp1g29670' => 'spa', 'Sp1g39600' => 'spa', 'Sp2g11080' => 'spa', 'Sp2g13970' => 'spa', 'Sp4g16130' => 'spa', 'Sp6g13080' => 'spa', 'Sp7g37270' => 'spa', 'TAR371G0065' => 'tar', 'TAR376G0340' => 'tar', 'TAR376G0435' => 'tar', 'TAR381G0002' => 'tar', 'TAR381G1236' => 'tar', 'TAR624G0055' => 'tar', 'TAR624G0324' => 'tar', 'TAR624G0696' => 'tar', 'TAR624G0906' => 'tar', 'TAR625G0107' => 'tar', 'TAR626G0015' => 'tar', 'TAR626G1356' => 'tar', 'TAR627G0888' => 'tar', 'TAR628G0399' => 'tar', 'TAR628G1327' => 'tar', 'TAR629G2831' => 'tar', 'TAR629G2874' => 'tar', 'TAR633G1432' => 'tar', 'TAR633G2771' => 'tar', 'THA.LOC104803394' => 'tha', 'THA.LOC104805153' => 'tha', 'THA.LOC104806784' => 'tha', 'THA.LOC104810473' => 'tha', 'THA.LOC104813100' => 'tha', 'THA.LOC104814215' => 'tha', 'THA.LOC104815554' => 'tha', 'THA.LOC104820544' => 'tha', 'THA.LOC104824754' => 'tha', 'THA.LOC104827717' => 'tha', 'Thecc.02G031400' => 'tca', 'Thecc.02G055900' => 'tca', 'Thecc.02G350800' => 'tca', 'Thecc.06G150900' => 'tca', 'Thecc.06G186600' => 'tca', 'Thecc.07G089600' => 'tca', 'Thecc.08G020400' => 'tca', 'Thecc.08G182100' => 'tca', 'Thhalv10000873m.g' => 'esa', 'Thhalv10004185m.g' => 'esa', 'Thhalv10006981m.g' => 'esa', 'Thhalv10007204m.g' => 'esa', 'Thhalv10011374m.g' => 'esa', 'Thhalv10013482m.g' => 'esa', 'Thhalv10017801m.g' => 'esa', 'Thhalv10024983m.g' => 'esa', 'TPR.G12072' => 'tpr', 'TPR.G15769' => 'tpr', 'TPR.G16504' => 'tpr', 'TPR.G16506' => 'tpr', 'TPR.G24345' => 'tpr', 'TPR.G26666' => 'tpr', 'TPR.G27320' => 'tpr', 'TPR.G31819' => 'tpr', 'TPR.G38879' => 'tpr', 'TPR.G39015' => 'tpr', 'TPR.G8819' => 'tpr', 'TWI09G0924' => 'twi', 'TWI12G0811' => 'twi', 'TWI12G1294' => 'twi', 'TWI31G0150' => 'twi', 'TWI36G1262' => 'twi', 'TWI38G1287' => 'twi', 'TWI38G1633' => 'twi', 'TWI38G1982' => 'twi', 'TWI39G0116' => 'twi', 'TWI60G1011' => 'twi', 'TWI63G0171' => 'twi', 'TWI73G0839' => 'twi', 'TWI79G1511' => 'twi', 'unitig_0.g915' => 'ugi', 'unitig_0.g916' => 'ugi', 'unitig_21.g20219' => 'ugi', 'unitig_21.g20416' => 'ugi', 'unitig_578.g16132' => 'ugi', 'unitig_578.g16718' => 'ugi', 'unitig_62.g23481' => 'ugi', 'unitig_744.g24535' => 'ugi', 'unitig_749.g13525' => 'ugi', 'vmacro01248' => 'vma', 'vmacro02290' => 'vma', 'vmacro10946' => 'vma', 'vmacro11865' => 'vma', 'vmacro12493' => 'vma', 'vmacro17322' => 'vma', 'vmacro21599' => 'vma', 'vmacro23041' => 'vma', 'VMungo0251G0004' => 'vmu', 'VMungo0251G2639' => 'vmu', 'VMungo0251G2967' => 'vmu', 'VMungo0540G0864' => 'vmu', 'VMungo0540G1569' => 'vmu', 'VMungo0647G0317' => 'vmu', 'VMungo0720G1373' => 'vmu', 'VMungo0720G1508' => 'vmu', 'VMungo1080G0485' => 'vmu', 'VMungo1215G3177' => 'vmu', 'Zm00001eb112600' => 'zma', 'Zm00001eb120220' => 'zma', 'Zm00001eb153240' => 'zma', 'Zm00001eb168880' => 'zma', 'Zm00001eb213920' => 'zma', 'Zm00001eb228280' => 'zma', 'Zm00001eb254580' => 'zma', 'Zm00001eb272180' => 'zma', 'Zm00001eb293190' => 'zma', 'Zm00001eb322930' => 'zma', 'Zm00001eb353360' => 'zma', 'Zm00001eb353390' => 'zma', 'Zm00001eb353430' => 'zma', 'Zm00001eb353440' => 'zma', 'Zm00001eb353780' => 'zma' ) $gf_id = 'HOM05D000499' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000499' ) $data_identifier = 'HOM05D000499' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 29, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 12, 'amhyb' => (int) 8, 'aly' => (int) 12, 'aox' => (int) 9, 'arhy' => (int) 26, 'ath' => (int) 8, 'atr' => (int) 7, 'acertr' => (int) 10, 'cqu' => (int) 15, 'bca' => (int) 29, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 11, 'cansat' => (int) 8, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 9, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 8, 'cpa' => (int) 10, 'csa' => (int) 7, 'camsi' => (int) 20, 'dca' => (int) 8, 'din' => (int) 12, 'dzi' => (int) 14, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 6, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 38, 'gra' => (int) 16, 'vvi' => (int) 8, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 5, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 11, 'lja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 11, 'mpo' => (int) 3, 'mbi' => (int) 14, 'mdo' => (int) 14, 'mtr' => (int) 8, 'cme' => (int) 9, 'egut' => (int) 9, 'ama' => (int) 11, 'nta' => (int) 17, 'nnu' => (int) 11, 'oeu' => (int) 18, 'osa' => (int) 8, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 6, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 9, 'rsi' => (int) 9, 'sbr' => (int) 10, 'sbo' => (int) 8, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 10, 'sas' => (int) 10, 'shi' => (int) 6, 'smo' => (int) 7, 'sly' => (int) 14, 'spe' => (int) 10, 'spa' => (int) 8, 'tar' => (int) 19, 'tha' => (int) 10, 'tca' => (int) 8, 'esa' => (int) 8, 'tpr' => (int) 11, 'twi' => (int) 13, 'ugi' => (int) 9, 'vma' => (int) 8, 'vmu' => (int) 10, 'zma' => (int) 15 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb353780' $species_info = array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ) $local_species = 'cqu' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000499', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1066', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p29780' => 'bna', 'A02p33180' => 'bna', 'A03p16470' => 'bna', 'A03p66010' => 'bna', 'A04p25970' => 'bna', 'A06p01270' => 'bna', 'A06p46080' => 'bna', 'A07p11400' => 'bna', 'A08p01840' => 'bna', 'A08p08230' => 'bna', 'A08p25740' => 'bna', 'A09p32070' => 'bna', 'A09p37830' => 'bna', 'A09p42840' => 'bna', 'A09p42850' => 'bna', 'Aa31LG10G2060' => 'aar', 'Aa31LG2G7410' => 'aar', 'Aa31LG6G10200' => 'aar', 'Aa31LG6G16680' => 'aar', 'Aa31LG6G8470' => 'aar', 'Aa31LG9G12730' => 'aar', 'Aa31LG9G13680' => 'aar', 'Aa31LG9G14920' => 'aar', 'Aa31LG9G6650' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4977' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5467' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3254' => 'aag', 'Actinidia02578' => 'ach', 'Actinidia07693' => 'ach', 'Actinidia08413' => 'ach', 'Actinidia08414' => 'ach', 'Actinidia15289' => 'ach', 'Actinidia19871' => 'ach', 'Actinidia21475' => 'ach', 'Actinidia22576' => 'ach', 'Actinidia28327' => 'ach', 'Actinidia32491' => 'ach', 'Actinidia39463' => 'ach', 'Actinidia39571' => 'ach', 'Ah.01g013750' => 'amhyb', 'Ah.01g023210' => 'amhyb', 'Ah.04g164850' => 'amhyb', 'Ah.05g178060' => 'amhyb', 'Ah.07g204270' => 'amhyb', 'Ah.07g208480' => 'amhyb', 'Ah.09g237410' => 'amhyb', 'Ah.14g089460' => 'amhyb', 'AL1G41790' => 'aly', 'AL1G49050' => 'aly', 'AL1G53810' => 'aly', 'AL1G61400' => 'aly', 'AL4G18580' => 'aly', 'AL5G12510' => 'aly', 'AL5G12540' => 'aly', 'AL6G43230' => 'aly', 'AL7G10370' => 'aly', 'AL7G19250' => 'aly', 'AL8G12240' => 'aly', 'AL8G18540' => 'aly', 'Aqoxy1G02409' => 'aox', 'Aqoxy2G03993' => 'aox', 'Aqoxy3G03357' => 'aox', 'Aqoxy4G00785' => 'aox', 'Aqoxy5G02598' => 'aox', 'Aqoxy6G00132' => 'aox', 'Aqoxy7G01776' => 'aox', 'Aqoxy7G02316' => 'aox', 'Aqoxy7G03973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.12AFKW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B8730' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27IQR1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3F75VG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3RE0GA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41TCQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.527VTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FIR39' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5W8UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DA38EV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ63HS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H1I32C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HC27T5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4M8AP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7N3CZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9UVDZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LS1NQA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT1D4B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SKC4TM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCFV76' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF9Q1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQWD9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1ZM88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WE07RT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YCK7VH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJE6Q6' => 'arhy', 'AT1G28240' => 'ath', 'AT1G34550' => 'ath', 'AT1G53040' => 'ath', 'AT2G02910' => 'ath', 'AT4G09630' => 'ath', 'AT4G38500' => 'ath', 'AT5G42660' => 'ath', 'AT5G46220' => 'ath', 'ATR0152G026' => 'atr', 'ATR0564G343' => 'atr', 'ATR0706G151' => 'atr', 'ATR0733G207' => 'atr', 'ATR0751G234' => 'atr', 'ATR0807G048' => 'atr', 'ATR1091G084' => 'atr', 'Atru.chr10.1229' => 'acertr', 'Atru.chr10.1230' => 'acertr', 'Atru.chr10.1874' => 'acertr', 'Atru.chr11.1808' => 'acertr', 'Atru.chr13.1795' => 'acertr', 'Atru.chr13.570' => 'acertr', 'Atru.chr2.2608' => 'acertr', 'Atru.chr2.2609' => 'acertr', 'Atru.chr5.3428' => 'acertr', 'Atru.chr8.1171' => 'acertr', 'AUR62004651' => 'cqu', 'AUR62008675' => 'cqu', 'AUR62010014' => 'cqu', 'AUR62013004' => 'cqu', 'AUR62014825' => 'cqu', 'AUR62015015' => 'cqu', 'AUR62015151' => 'cqu', 'AUR62017020' => 'cqu', 'AUR62019422' => 'cqu', 'AUR62023570' => 'cqu', 'AUR62025571' => 'cqu', 'AUR62029098' => 'cqu', 'AUR62033863' => 'cqu', 'AUR62034296' => 'cqu', 'AUR62040075' => 'cqu', 'BcaB02g07334' => 'bca', 'BcaB02g10575' => 'bca', 'BcaB03g12119' => 'bca', 'BcaB03g12120' => 'bca', 'BcaB03g13945' => 'bca', 'BcaB04g17123' => 'bca', 'BcaB04g17867' => 'bca', 'BcaB04g19839' => 'bca', 'BcaB07g30317' => 'bca', 'BcaB07g32432' => 'bca', 'BcaB07g33362' => 'bca', 'BcaB08g36611' => 'bca', 'BcaC01g00028' => 'bca', 'BcaC01g01356' => 'bca', 'BcaC01g02034' => 'bca', 'BcaC01g06051' => 'bca', 'BcaC03g16839' => 'bca', 'BcaC03g17176' => 'bca', 'BcaC05g26829' => 'bca', 'BcaC06g31490' => 'bca', 'BcaC06g35344' => 'bca', 'BcaC06g36570' => 'bca', 'BcaC07g37537' => 'bca', 'BcaC08g43491' => 'bca', 'BcaC08g43773' => 'bca', 'BcaNung00234' => 'bca', 'BcaNung01982' => 'bca', 'BcaNung03707' => 'bca', 'BcaNung06454' => 'bca', 'BolC2t10762H' => 'bol', 'BolC2t11191H' => 'bol', 'BolC3t14322H' => 'bol', 'BolC3t19747H' => 'bol', 'BolC3t21425H' => 'bol', 'BolC4t27800H' => 'bol', 'BolC5t31423H' => 'bol', 'BolC6t35951H' => 'bol', 'BolC6t36282H' => 'bol', 'BolC7t40678H' => 'bol', 'BolC7t40679H' => 'bol', 'BolC7t42222H' => 'bol', 'BolC7t43492H' => 'bol', 'BolC7t46785H' => 'bol', 'BolC8t47853H' => 'bol', 'BolC9t56805H' => 'bol', 'BraA02t08000Z' => 'bra', 'BraA02t08341Z' => 'bra', 'BraA03t10936Z' => 'bra', 'BraA03t15657Z' => 'bra', 'BraA04t18100Z' => 'bra', 'BraA05t20523Z' => 'bra', 'BraA06t23353Z' => 'bra', 'BraA06t27473Z' => 'bra', 'BraA06t27769Z' => 'bra', 'BraA07t28928Z' => 'bra', 'BraA08t32236Z' => 'bra', 'BraA08t32841Z' => 'bra', 'BraA08t34524Z' => 'bra', 'BraA09t38742Z' => 'bra', 'BraA09t39295Z' => 'bra', 'C02p47180' => 'bna', 'C02p50990' => 'bna', 'C03p19360' => 'bna', 'C03p74950' => 'bna', 'C03p91000' => 'bna', 'C04p63260' => 'bna', 'C05p27050' => 'bna', 'C06p08750' => 'bna', 'C06p11490' => 'bna', 'C07p02820' => 'bna', 'C07p17180' => 'bna', 'C07p29440' => 'bna', 'C07p63730' => 'bna', 'C09p39260' => 'bna', 'CAN.G1164.34' => 'can', 'CAN.G1164.39' => 'can', 'CAN.G1530.3' => 'can', 'CAN.G162.61' => 'can', 'CAN.G176.6' => 'can', 'CAN.G289.49' => 'can', 'CAN.G370.21' => 'can', 'CAN.G370.22' => 'can', 'CAN.G371.117' => 'can', 'CAN.G58.37' => 'can', 'CAN.G588.98' => 'can', 'CANSAT21G2266' => 'cansat', 'CANSAT25G2799' => 'cansat', 'CANSAT35G0862' => 'cansat', 'CANSAT35G1704' => 'cansat', 'CANSAT35G1760' => 'cansat', 'CANSAT56G3971' => 'cansat', 'CANSAT56G4116' => 'cansat', 'CANSAT80G1259' => 'cansat', 'CARHR027730' => 'chi', 'CARHR033880' => 'chi', 'CARHR043270' => 'chi', 'CARHR145330' => 'chi', 'CARHR145340' => 'chi', 'CARHR175570' => 'chi', 'CARHR181570' => 'chi', 'CARHR258470' => 'chi', 'CARHR260490' => 'chi', 'CARHR294220' => 'chi', 'Carub.0001s2668' => 'cru', 'Carub.0001s3257' => 'cru', 'Carub.0001s4220' => 'cru', 'Carub.0005s0179' => 'cru', 'Carub.0006s2807' => 'cru', 'Carub.0007s0039' => 'cru', 'Carub.0008s0169' => 'cru', 'Carub.0008s0636' => 'cru', 'Ca_00338_v3' => 'car', 'Ca_00542_v3' => 'car', 'Ca_01844_v3' => 'car', 'Ca_10611_v3' => 'car', 'Ca_13326_v3' => 'car', 'Ca_17944_v3' => 'car', 'Ca_18546_v3' => 'car', 'Ca_24219_v3' => 'car', 'Ca_29972_v3' => 'car', 'CBR_g3681' => 'cbr', 'CBR_g40021' => 'cbr', 'Cc01_g08140' => 'ccan', 'Cc02_g13410' => 'ccan', 'Cc02_g37480' => 'ccan', 'Cc05_g12030' => 'ccan', 'Cc09_g03370' => 'ccan', 'Cc09_g10300' => 'ccan', 'Cc10_g03530' => 'ccan', 'Cc10_g11380' => 'ccan', 'CDE01G0176' => 'cde', 'CDE02G0675' => 'cde', 'CDE02G0942' => 'cde', 'CDE02G1153' => 'cde', 'CDE02G4177' => 'cde', 'CDE04G2117' => 'cde', 'CDE04G2736' => 'cde', 'CDE08G1161' => 'cde', 'CDE09G1238' => 'cde', 'Cfa000467' => 'cfa', 'Cfa000947' => 'cfa', 'Cfa004969' => 'cfa', 'Cfa005284' => 'cfa', 'Cfa008993' => 'cfa', 'Cfa018187' => 'cfa', 'Cfa018454' => 'cfa', 'Cfa020585' => 'cfa', 'Ciclev10000424m.g' => 'ccl', 'Ciclev10003605m.g' => 'ccl', 'Ciclev10007828m.g' => 'ccl', 'Ciclev10014620m.g' => 'ccl', 'Ciclev10015169m.g' => 'ccl', 'Ciclev10018291m.g' => 'ccl', 'Ciclev10028256m.g' => 'ccl', 'Ciclev10033822m.g' => 'ccl', 'CiPaw.05G060300' => 'cil', 'CiPaw.05G085000' => 'cil', 'CiPaw.06G083700' => 'cil', 'CiPaw.06G120300' => 'cil', 'CiPaw.09G060500' => 'cil', 'CiPaw.09G123800' => 'cil', 'CiPaw.11G169700' => 'cil', 'CiPaw.12G118300' => 'cil', 'CiPaw.15G071000' => 'cil', 'CiPaw.15G081900' => 'cil', 'ClCG01G024610' => 'cla', 'ClCG03G006070' => 'cla', 'ClCG05G019250' => 'cla', 'ClCG09G009500' => 'cla', 'ClCG11G008200' => 'cla', 'ClCG11G018080' => 'cla', 'COL.COLO4_17373' => 'col', 'COL.COLO4_22994' => 'col', 'COL.COLO4_26389' => 'col', 'COL.COLO4_27170' => 'col', 'COL.COLO4_31074' => 'col', 'COL.COLO4_31465' => 'col', 'COL.COLO4_36438' => 'col', 'COL.COLO4_36439' => 'col', 'Cpa.g.c38781' => 'cpa', 'Cpa.g.sc128.12' => 'cpa', 'Cpa.g.sc166.7' => 'cpa', 'Cpa.g.sc166.8' => 'cpa', 'Cpa.g.sc20.111' => 'cpa', 'Cpa.g.sc27.31' => 'cpa', 'Cpa.g.sc64.36' => 'cpa', 'Cpa.g.sc64.37' => 'cpa', 'Cpa.g.sc66.49' => 'cpa', 'Cpa.g.sc80.64' => 'cpa', 'CsaV3_1G012320' => 'csa', 'CsaV3_2G008480' => 'csa', 'CsaV3_2G033450' => 'csa', 'CsaV3_3G044830' => 'csa', 'CsaV3_4G033710' => 'csa', 'CsaV3_6G051730' => 'csa', 'CsaV3_7G025350' => 'csa', 'CSS0001067' => 'camsi', 'CSS0005996' => 'camsi', 'CSS0006590' => 'camsi', 'CSS0009673' => 'camsi', 'CSS0010201' => 'camsi', 'CSS0010549' => 'camsi', 'CSS0011364' => 'camsi', 'CSS0014473' => 'camsi', 'CSS0014961' => 'camsi', 'CSS0020191' => 'camsi', 'CSS0021165' => 'camsi', 'CSS0022306' => 'camsi', 'CSS0030591' => 'camsi', 'CSS0030696' => 'camsi', 'CSS0032653' => 'camsi', 'CSS0037487' => 'camsi', 'CSS0041102' => 'camsi', 'CSS0041261' => 'camsi', 'CSS0046246' => 'camsi', 'CSS0049256' => 'camsi', 'DCAR_004075' => 'dca', 'DCAR_011538' => 'dca', 'DCAR_019553' => 'dca', 'DCAR_020952' => 'dca', 'DCAR_021739' => 'dca', 'DCAR_027407' => 'dca', 'DCAR_027913' => 'dca', 'DCAR_028066' => 'dca', 'Dinv05899' => 'din', 'Dinv07563' => 'din', 'Dinv08010' => 'din', 'Dinv14125' => 'din', 'Dinv20172' => 'din', 'Dinv30743' => 'din', 'Dinv31229' => 'din', 'Dinv34162' => 'din', 'Dinv36028' => 'din', 'Dinv39368' => 'din', 'Dinv40565' => 'din', 'Dinv41706' => 'din', 'Duzib052G0089' => 'dzi', 'Duzib116G0641' => 'dzi', 'Duzib132G0069' => 'dzi', 'Duzib132G1219' => 'dzi', 'Duzib147G0278' => 'dzi', 'Duzib160G0480' => 'dzi', 'Duzib170G0661' => 'dzi', 'Duzib177G0591' => 'dzi', 'Duzib187G1353' => 'dzi', 'Duzib192G0858' => 'dzi', 'Duzib192G0883' => 'dzi', 'Duzib213G0506' => 'dzi', 'Duzib235G0289' => 'dzi', 'Duzib251G0422' => 'dzi', 'ECA232G3898' => 'eca', 'ECA233G5950' => 'eca', 'ECA234G1699' => 'eca', 'ECA234G2421' => 'eca', 'ECA236G0426' => 'eca', 'ECA236G4331' => 'eca', 'ECA248G2573' => 'eca', 'EL10Ac1g00077' => 'bvu', 'EL10Ac1g01746' => 'bvu', 'EL10Ac2g03464' => 'bvu', 'EL10Ac4g08176' => 'bvu', 'EL10Ac7g17521' => 'bvu', 'EL10Ac8g20386' => 'bvu', 'EL10Ac9g21343' => 'bvu', 'EL10Ac9g22688' => 'bvu', 'Eucgr.B03434' => 'egr', 'Eucgr.D00618' => 'egr', 'Eucgr.E02395' => 'egr', 'Eucgr.F01129' => 'egr', 'Eucgr.F02622' => 'egr', 'Eucgr.F04207' => 'egr', 'FAN01G0570' => 'fan', 'FAN03G3351' => 'fan', 'FAN06G3702' => 'fan', 'FAN07G2149' => 'fan', 'FAN10G3758' => 'fan', 'FAN11G1170' => 'fan', 'FAN11G2050' => 'fan', 'FAN11G2724' => 'fan', 'FAN12G1700' => 'fan', 'FAN12G2028' => 'fan', 'FAN15G1160' => 'fan', 'FAN15G3063' => 'fan', 'FAN16G2540' => 'fan', 'FAN16G3077' => 'fan', 'FAN16G3624' => 'fan', 'FAN17G0221' => 'fan', 'FAN20G2492' => 'fan', 'FAN20G2905' => 'fan', 'FAN21G0548' => 'fan', 'FAN21G1300' => 'fan', 'FAN22G0077' => 'fan', 'FAN22G1315' => 'fan', 'FAN24G1280' => 'fan', 'FAN24G1445' => 'fan', 'FAN24G3527' => 'fan', 'FAN25G0464' => 'fan', 'FAN25G2885' => 'fan', 'FAN25G3270' => 'fan', 'FAN27G1101' => 'fan', 'FAN27G2846' => 'fan', 'FAN27G3524' => 'fan', 'FvH4_2g11770' => 'fve', 'FvH4_2g15630' => 'fve', 'FvH4_3g05570' => 'fve', 'FvH4_3g09110' => 'fve', 'FvH4_3g19940' => 'fve', 'FvH4_4g04821' => 'fve', 'FvH4_4g31480' => 'fve', 'FvH4_7g01740' => 'fve', 'Glyma.05G130400' => 'gma', 'Glyma.05G156400' => 'gma', 'Glyma.07G197000' => 'gma', 'Glyma.08G085151' => 'gma', 'Glyma.08G114500' => 'gma', 'Glyma.08G300400' => 'gma', 'Glyma.10G215800' => 'gma', 'Glyma.12G224400' => 'gma', 'Glyma.13G179300' => 'gma', 'Glyma.13G218151' => 'gma', 'Glyma.13G238800' => 'gma', 'Glyma.13G276900' => 'gma', 'Glyma.14G078200' => 'gma', 'Glyma.15G074500' => 'gma', 'Glyma.15G094100' => 'gma', 'Glyma.17G247200' => 'gma', 'Glyma.18G120100' => 'gma', 'Glyma.20G176000' => 'gma', 'Gohir.A01G063600' => 'ghi', 'Gohir.A01G170301' => 'ghi', 'Gohir.A02G060500' => 'ghi', 'Gohir.A05G133850' => 'ghi', 'Gohir.A05G161400' => 'ghi', 'Gohir.A06G012900' => 'ghi', 'Gohir.A06G035901' => 'ghi', 'Gohir.A06G127100' => 'ghi', 'Gohir.A06G210500' => 'ghi', 'Gohir.A08G008650' => 'ghi', 'Gohir.A09G072700' => 'ghi', 'Gohir.A09G088301' => 'ghi', 'Gohir.A10G040600' => 'ghi', 'Gohir.A12G036300' => 'ghi', 'Gohir.A12G143350' => 'ghi', 'Gohir.A12G165500' => 'ghi', 'Gohir.A13G145700' => 'ghi', 'Gohir.D01G050000' => 'ghi', 'Gohir.D01G051366' => 'ghi', 'Gohir.D01G161350' => 'ghi', 'Gohir.D02G065900' => 'ghi', 'Gohir.D05G164200' => 'ghi', 'Gohir.D05G355500' => 'ghi', 'Gohir.D06G010400' => 'ghi', 'Gohir.D06G111250' => 'ghi', 'Gohir.D06G132000' => 'ghi', 'Gohir.D06G210500' => 'ghi', 'Gohir.D07G165675' => 'ghi', 'Gohir.D08G062240' => 'ghi', 'Gohir.D08G086101' => 'ghi', 'Gohir.D08G138060' => 'ghi', 'Gohir.D09G072300' => 'ghi', 'Gohir.D10G041400' => 'ghi', 'Gohir.D11G191020' => 'ghi', 'Gohir.D11G212066' => 'ghi', 'Gohir.D12G036300' => 'ghi', 'Gohir.D12G168600' => 'ghi', 'Gohir.D13G150600' => 'ghi', 'Gorai.001G057300' => 'gra', 'Gorai.002G069900' => 'gra', 'Gorai.002G200000' => 'gra', 'Gorai.003G067600' => 'gra', 'Gorai.005G074800' => 'gra', 'Gorai.006G087300' => 'gra', 'Gorai.008G037500' => 'gra', 'Gorai.008G181400' => 'gra', 'Gorai.009G169400' => 'gra', 'Gorai.009G387900' => 'gra', 'Gorai.010G013300' => 'gra', 'Gorai.010G153800' => 'gra', 'Gorai.010G255800' => 'gra', 'Gorai.011G043700' => 'gra', 'Gorai.011G198900' => 'gra', 'Gorai.013G168400' => 'gra', 'GSVIVG01005212001' => 'vvi', 'GSVIVG01006163001' => 'vvi', 'GSVIVG01009625001' => 'vvi', 'GSVIVG01014338001' => 'vvi', 'GSVIVG01020005001' => 'vvi', 'GSVIVG01021450001' => 'vvi', 'GSVIVG01023975001' => 'vvi', 'GSVIVG01034490001' => 'vvi', 'HanXRQChr04g0112071' => 'han', 'HanXRQChr05g0131151' => 'han', 'HanXRQChr09g0262371' => 'han', 'HanXRQChr09g0268401' => 'han', 'HanXRQChr10g0279241' => 'han', 'HanXRQChr10g0297961' => 'han', 'HanXRQChr11g0326231' => 'han', 'HanXRQChr11g0328471' => 'han', 'HanXRQChr16g0507941' => 'han', 'HanXRQChr17g0560211' => 'han', 'Haze_02108' => 'cav', 'Haze_02428' => 'cav', 'Haze_05593' => 'cav', 'Haze_06448' => 'cav', 'Haze_09427' => 'cav', 'Haze_12022' => 'cav', 'Haze_17612' => 'cav', 'Haze_17928' => 'cav', 'Hma1.2p1_0032F.1_g019250' => 'hma', 'Hma1.2p1_0163F.1_g072690' => 'hma', 'Hma1.2p1_0265F.1_g106710' => 'hma', 'Hma1.2p1_0286F.1_g113970' => 'hma', 'Hma1.2p1_0363F.1_g136640' => 'hma', 'Hma1.2p1_0584F.1_g183470' => 'hma', 'Hma1.2p1_0885F.1_g232570' => 'hma', 'HPP92_006022' => 'vpl', 'HPP92_007320' => 'vpl', 'HPP92_011521' => 'vpl', 'HPP92_019387' => 'vpl', 'HPP92_024038' => 'vpl', 'Hund05891' => 'sun', 'Hund06450' => 'sun', 'Hund12053' => 'sun', 'Hund16800' => 'sun', 'Hund21222' => 'sun', 'Hund22896' => 'sun', 'Hund23746' => 'sun', 'Hund27083' => 'sun', 'Lalb_Chr02g0141831' => 'lal', 'Lalb_Chr02g0141841' => 'lal', 'Lalb_Chr05g0220411' => 'lal', 'Lalb_Chr06g0162081' => 'lal', 'Lalb_Chr09g0327651' => 'lal', 'Lalb_Chr13g0295051' => 'lal', 'Lalb_Chr15g0086801' => 'lal', 'Lalb_Chr16g0383781' => 'lal', 'Lalb_Chr16g0383791' => 'lal', 'Lalb_Chr18g0055441' => 'lal', 'Lalb_Chr18g0059611' => 'lal', 'Lalb_Chr20g0109661' => 'lal', 'Lalb_Chr20g0109831' => 'lal', 'Lalb_Chr20g0121871' => 'lal', 'Lalb_Chr22g0355361' => 'lal', 'Lalb_Chr25g0286371' => 'lal', 'Lj1A1187G43' => 'lonja', 'Lj1A1205T50' => 'lonja', 'Lj1A800G33' => 'lonja', 'Lj1C1187T7' => 'lonja', 'Lj1C843T11' => 'lonja', 'Lj1g0010940' => 'lja', 'Lj2A288T69' => 'lonja', 'Lj3g0024276' => 'lja', 'Lj4A47T76' => 'lonja', 'Lj4g0005805' => 'lja', 'Lj4g0006097' => 'lja', 'Lj4g0008528' => 'lja', 'Lj4g0024907' => 'lja', 'Lj5g0012472' => 'lja', 'Lj5g0018648' => 'lja', 'Lj6C789G1' => 'lonja', 'Lj6g0004000' => 'lja', 'Lj7A292G67' => 'lonja', 'Lj7A292T64' => 'lonja', 'Lj9A400T58' => 'lonja', 'Lsat_1_v5_gn_1_126181' => 'lsa', 'Lsat_1_v5_gn_4_123041' => 'lsa', 'Lsat_1_v5_gn_4_133620' => 'lsa', 'Lsat_1_v5_gn_4_53221' => 'lsa', 'Lsat_1_v5_gn_4_71961' => 'lsa', 'Lsat_1_v5_gn_7_105241' => 'lsa', 'Lsat_1_v5_gn_7_21361' => 'lsa', 'Lsat_1_v5_gn_7_28860' => 'lsa', 'Lsat_1_v5_gn_7_31260' => 'lsa', 'Lsat_1_v5_gn_8_52801' => 'lsa', 'Manes.02G191400' => 'mes', 'Manes.03G110100' => 'mes', 'Manes.04G071100' => 'mes', 'Manes.05G100500' => 'mes', 'Manes.05G164700' => 'mes', 'Manes.15G087000' => 'mes', 'Manes.15G121500' => 'mes', 'Manes.16G028300' => 'mes', 'Manes.17G046100' => 'mes', 'Manes.17G069800' => 'mes', 'Manes.18G100500' => 'mes', 'Mapoly0002s0109' => 'mpo', 'Mapoly0024s0007' => 'mpo', 'Mapoly0089s0032' => 'mpo', 'MBI04_g42241_MAGBIO' => 'mbi', 'MBI05_g11988_MAGBIO' => 'mbi', 'MBI05_g35452_MAGBIO' => 'mbi', 'MBI07_g30179_MAGBIO' => 'mbi', 'MBI07_g35859_MAGBIO' => 'mbi', 'MBI07_g35860_MAGBIO' => 'mbi', 'MBI07_g37166_MAGBIO' => 'mbi', 'MBI08_g18172_MAGBIO' => 'mbi', 'MBI09_g08441_MAGBIO' => 'mbi', 'MBI13_g01676_MAGBIO' => 'mbi', 'MBI14_g42955_MAGBIO' => 'mbi', 'MBI16_g13161_MAGBIO' => 'mbi', 'MBI17_g27204_MAGBIO' => 'mbi', 'MBI19_g21595_MAGBIO' => 'mbi', 'MD00G1148400' => 'mdo', 'MD02G1301200' => 'mdo', 'MD03G1227800' => 'mdo', 'MD05G1041100' => 'mdo', 'MD05G1124800' => 'mdo', 'MD05G1284000' => 'mdo', 'MD05G1338800' => 'mdo', 'MD05G1338900' => 'mdo', 'MD07G1022800' => 'mdo', 'MD10G1047500' => 'mdo', 'MD10G1127500' => 'mdo', 'MD10G1262300' => 'mdo', 'MD10G1293800' => 'mdo', 'MD16G1074300' => 'mdo', 'Medtr1g021670' => 'mtr', 'Medtr1g096320' => 'mtr', 'Medtr2g013690' => 'mtr', 'Medtr2g019450' => 'mtr', 'Medtr2g085170' => 'mtr', 'Medtr4g088785' => 'mtr', 'Medtr8g055930' => 'mtr', 'Medtr8g085850' => 'mtr', 'MELO3C002605.2' => 'cme', 'MELO3C003891.2' => 'cme', 'MELO3C004012.2' => 'cme', 'MELO3C007134.2' => 'cme', 'MELO3C008118.2' => 'cme', 'MELO3C016700.2' => 'cme', 'MELO3C024127.2' => 'cme', 'MELO3C033361.2' => 'cme', 'MELO3C033362.2' => 'cme', 'Migut.C00430' => 'egut', 'Migut.C01246' => 'egut', 'Migut.E00101' => 'egut', 'Migut.H01486' => 'egut', 'Migut.H01939' => 'egut', 'Migut.K00360' => 'egut', 'Migut.M00910' => 'egut', 'Migut.M01139' => 'egut', 'Migut.N02677' => 'egut', 'MSTRG.13252' => 'ama', 'MSTRG.14701' => 'ama', 'MSTRG.1521' => 'ama', 'MSTRG.15884' => 'ama', 'MSTRG.16242' => 'ama', 'MSTRG.22285' => 'ama', 'MSTRG.22444' => 'ama', 'MSTRG.2349' => 'ama', 'MSTRG.26308' => 'ama', 'MSTRG.28296' => 'ama', 'MSTRG.9895' => 'ama', 'Nitab4.5_0000110g0060' => 'nta', 'Nitab4.5_0000420g0130' => 'nta', 'Nitab4.5_0000422g0030' => 'nta', 'Nitab4.5_0000560g0180' => 'nta', 'Nitab4.5_0000703g0100' => 'nta', 'Nitab4.5_0000786g0200' => 'nta', 'Nitab4.5_0001336g0020' => 'nta', 'Nitab4.5_0001796g0030' => 'nta', 'Nitab4.5_0003348g0060' => 'nta', 'Nitab4.5_0003698g0040' => 'nta', 'Nitab4.5_0003942g0090' => 'nta', 'Nitab4.5_0004775g0070' => 'nta', 'Nitab4.5_0004864g0030' => 'nta', 'Nitab4.5_0005615g0020' => 'nta', 'Nitab4.5_0009288g0030' => 'nta', 'Nitab4.5_0009341g0010' => 'nta', 'Nitab4.5_0009535g0010' => 'nta', 'Nn1g03995' => 'nnu', 'Nn1g04100' => 'nnu', 'Nn1g06530' => 'nnu', 'Nn3g16404' => 'nnu', 'Nn3g17212' => 'nnu', 'Nn3g20776' => 'nnu', 'Nn3g21923' => 'nnu', 'Nn5g27737' => 'nnu', 'Nn5g29461' => 'nnu', 'Nn7g38355' => 'nnu', 'Nn8g39873' => 'nnu', 'Oeu000548.2' => 'oeu', 'Oeu004672.1' => 'oeu', 'Oeu015605.2' => 'oeu', 'Oeu016092.1' => 'oeu', 'Oeu017879.3' => 'oeu', 'Oeu024910.1' => 'oeu', 'Oeu028965.1' => 'oeu', 'Oeu031269.1' => 'oeu', 'Oeu031270.1' => 'oeu', 'Oeu032535.1' => 'oeu', 'Oeu034151.1' => 'oeu', 'Oeu034152.1' => 'oeu', 'Oeu034588.2' => 'oeu', 'Oeu050846.1' => 'oeu', 'Oeu050849.2' => 'oeu', 'Oeu051063.2' => 'oeu', 'Oeu052368.1' => 'oeu', 'Oeu052370.1' => 'oeu', 'Os01g0210400' => 'osa', 'Os01g0304300' => 'osa', 'Os01g0749100' => 'osa', 'Os02g0745800' => 'osa', 'Os03g0769050' => 'osa', 'Os05g0531500' => 'osa', 'Os06g0724300' => 'osa', 'Os11g0198100' => 'osa', 'Peaxi162Scf00069g01425' => 'pax', 'Peaxi162Scf00280g00811' => 'pax', 'Peaxi162Scf00310g00615' => 'pax', 'Peaxi162Scf00362g00542' => 'pax', 'Peaxi162Scf00461g00310' => 'pax', 'Peaxi162Scf00530g00118' => 'pax', 'Peaxi162Scf00541g00057' => 'pax', 'Peaxi162Scf00661g00017' => 'pax', 'Peaxi162Scf00926g00027' => 'pax', 'Peaxi162Scf01064g00263' => 'pax', 'Peaxi162Scf01211g00135' => 'pax', 'PGR004G2336' => 'pgr', 'PGR042G0327' => 'pgr', 'PGR042G1957' => 'pgr', 'PGR042G2003' => 'pgr', 'PGR042G3929' => 'pgr', 'PGR083G1137' => 'pgr', 'PGR083G1364' => 'pgr', 'PGSC0003DMG400003381' => 'stu', 'PGSC0003DMG400003417' => 'stu', 'PGSC0003DMG400008981' => 'stu', 'PGSC0003DMG400012417' => 'stu', 'PGSC0003DMG400012823' => 'stu', 'PGSC0003DMG400016885' => 'stu', 'PGSC0003DMG400022812' => 'stu', 'PGSC0003DMG400029726' => 'stu', 'PGSC0003DMG401009243' => 'stu', 'PGSC0003DMG401031505' => 'stu', 'PGSC0003DMG402031505' => 'stu', 'Phvul.001G017600' => 'pvu', 'Phvul.002G193500' => 'pvu', 'Phvul.002G228900' => 'pvu', 'Phvul.002G236800' => 'pvu', 'Phvul.003G049500' => 'pvu', 'Phvul.005G072000' => 'pvu', 'Phvul.006G164800' => 'pvu', 'Phvul.006G185100' => 'pvu', 'Phvul.007G090000' => 'pvu', 'Potri.001G399800' => 'ptr', 'Potri.002G149900' => 'ptr', 'Potri.004G044100' => 'ptr', 'Potri.004G177600' => 'ptr', 'Potri.009G138000' => 'ptr', 'Potri.010G094000' => 'ptr', 'Potri.011G053000' => 'ptr', 'Potri.011G119300' => 'ptr', 'Potri.013G113700' => 'ptr', 'Potri.018G107800' => 'ptr', 'Potri.019G084100' => 'ptr', 'Pp3c14_23720' => 'ppa', 'Pp3c16_6340' => 'ppa', 'Pp3c23_13420' => 'ppa', 'Pp3c24_2740' => 'ppa', 'Pp3c25_860' => 'ppa', 'Pp3c8_21750' => 'ppa', 'Prupe.1G273000' => 'ppe', 'Prupe.1G273700' => 'ppe', 'Prupe.1G274100' => 'ppe', 'Prupe.2G023300' => 'ppe', 'Prupe.4G048000' => 'ppe', 'Prupe.4G080400' => 'ppe', 'Prupe.4G181200' => 'ppe', 'Prupe.8G056900' => 'ppe', 'Prupe.8G168700' => 'ppe', 'Psat1g189080' => 'psa', 'Psat1g204760' => 'psa', 'Psat4g175560' => 'psa', 'Psat4g177720' => 'psa', 'Psat5g244240' => 'psa', 'Psat6g010720' => 'psa', 'Psat6g187200' => 'psa', 'Psat7g072040' => 'psa', 'PSO017G3501' => 'pso', 'PSO063G2148' => 'pso', 'PSO063G5608' => 'pso', 'PSO210G6392' => 'pso', 'PSO541G2319' => 'pso', 'PSO541G2836' => 'pso', 'PSO541G4012' => 'pso', 'PSO541G6253' => 'pso', 'PSO675G0580' => 'pso', 'PSO675G0856' => 'pso', 'PSO675G5635' => 'pso', 'PSO675G9157' => 'pso', 'PSO832G1660' => 'pso', 'PSO832G1969' => 'pso', 'QL02p007186' => 'qlo', 'QL02p033904' => 'qlo', 'QL03p064391' => 'qlo', 'QL05p040593' => 'qlo', 'QL05p058242' => 'qlo', 'QL08p021825' => 'qlo', 'QL11p004981' => 'qlo', 'RcHm_v2.0_Chr1g0318301' => 'rch', 'RcHm_v2.0_Chr4g0418501' => 'rch', 'RcHm_v2.0_Chr4g0439971' => 'rch', 'RcHm_v2.0_Chr5g0008541' => 'rch', 'RcHm_v2.0_Chr5g0014101' => 'rch', 'RcHm_v2.0_Chr5g0014131' => 'rch', 'RcHm_v2.0_Chr5g0033621' => 'rch', 'RcHm_v2.0_Chr6g0272041' => 'rch', 'RcHm_v2.0_Chr6g0278831' => 'rch', 'Rhsim02G0130400' => 'rsi', 'Rhsim02G0171100' => 'rsi', 'Rhsim05G0053000' => 'rsi', 'Rhsim05G0053100' => 'rsi', 'Rhsim06G0096500' => 'rsi', 'Rhsim06G0096600' => 'rsi', 'Rhsim06G0199100' => 'rsi', 'Rhsim12G0062300' => 'rsi', 'Rhsim12G0062800' => 'rsi', 'Sabra02G0118600' => 'sbr', 'Sabra04G0027300' => 'sbr', 'Sabra04G0119500' => 'sbr', 'Sabra08G0112500' => 'sbr', 'Sabra11G0036800' => 'sbr', 'Sabra11G0103800' => 'sbr', 'Sabra13G0096300' => 'sbr', 'Sabra16G0262300' => 'sbr', 'Sabra18G0091700' => 'sbr', 'Sabra19G0095400' => 'sbr', 'SalBow6G3080' => 'sbo', 'SalBow7G1157' => 'sbo', 'SalBow7G2123' => 'sbo', 'SalBow7G2285' => 'sbo', 'SalBow7G3537' => 'sbo', 'SalBow8G2947' => 'sbo', 'SalBow8G4463' => 'sbo', 'SalBow8G5466' => 'sbo', 'Sc01g0001750' => 'sci', 'Sc02g0006640' => 'sci', 'Sc02g0006670' => 'sci', 'Sc04g0008220' => 'sci', 'Sc05g0006190' => 'sci', 'Sc08g0002760' => 'sci', 'Sc17g0006170' => 'sci', 'Sc22g0002050' => 'sci', 'Sc23g0001190' => 'sci', 'Sc24g0000980' => 'sci', 'Sed0006245' => 'sed', 'Sed0007543' => 'sed', 'Sed0009411' => 'sed', 'Sed0010765' => 'sed', 'Sed0012944' => 'sed', 'Sed0014682' => 'sed', 'Sed0016174' => 'sed', 'Sed0016796' => 'sed', 'Sed0020317' => 'sed', 'Sed0021467' => 'sed', 'SEGI_01316' => 'sgi', 'SEGI_03374' => 'sgi', 'SEGI_16265' => 'sgi', 'SEGI_18569' => 'sgi', 'SEGI_20351' => 'sgi', 'SEGI_26395' => 'sgi', 'SEGI_29469' => 'sgi', 'SEGI_34771' => 'sgi', 'SEGI_36769' => 'sgi', 'SEGI_37139' => 'sgi', 'SGA_v2.0_scaffold100G29687' => 'sas', 'SGA_v2.0_scaffold118G32472' => 'sas', 'SGA_v2.0_scaffold14G07051' => 'sas', 'SGA_v2.0_scaffold183G39845' => 'sas', 'SGA_v2.0_scaffold1G00174' => 'sas', 'SGA_v2.0_scaffold22G09714' => 'sas', 'SGA_v2.0_scaffold333G48992' => 'sas', 'SGA_v2.0_scaffold46G17491' => 'sas', 'SGA_v2.0_scaffold49G18294' => 'sas', 'SGA_v2.0_scaffold63G21658' => 'sas', 'SHI01741' => 'shi', 'SHI05771' => 'shi', 'SHI18077' => 'shi', 'SHI20525' => 'shi', 'SHI20527' => 'shi', 'SHI20528' => 'shi', 'SMO172G0185' => 'smo', 'SMO198G0020' => 'smo', 'SMO351G0006' => 'smo', 'SMO356G0118' => 'smo', 'SMO358G0296' => 'smo', 'SMO367G0079' => 'smo', 'SMO367G1277' => 'smo', 'Solyc01g014220.3' => 'sly', 'Solyc01g111770.2' => 'sly', 'Solyc02g078180.3' => 'sly', 'Solyc03g006430.3' => 'sly', 'Solyc03g006456.1' => 'sly', 'Solyc03g079860.2' => 'sly', 'Solyc04g079770.3' => 'sly', 'Solyc05g007430.4' => 'sly', 'Solyc07g063150.3' => 'sly', 'Solyc08g016620.3' => 'sly', 'Solyc09g057590.3' => 'sly', 'Solyc09g057600.1' => 'sly', 'Solyc10g009050.3' => 'sly', 'Solyc11g017420.2' => 'sly', 'Sopen01g053810' => 'spe', 'Sopen02g023040' => 'spe', 'Sopen03g002440' => 'spe', 'Sopen04g033350' => 'spe', 'Sopen05g003310' => 'spe', 'Sopen07g004050' => 'spe', 'Sopen07g031340' => 'spe', 'Sopen08g006990' => 'spe', 'Sopen10g004830' => 'spe', 'Sopen11g009370' => 'spe', 'Sp1g24450' => 'spa', 'Sp1g29670' => 'spa', 'Sp1g39600' => 'spa', 'Sp2g11080' => 'spa', 'Sp2g13970' => 'spa', 'Sp4g16130' => 'spa', 'Sp6g13080' => 'spa', 'Sp7g37270' => 'spa', 'TAR371G0065' => 'tar', 'TAR376G0340' => 'tar', 'TAR376G0435' => 'tar', 'TAR381G0002' => 'tar', 'TAR381G1236' => 'tar', 'TAR624G0055' => 'tar', 'TAR624G0324' => 'tar', 'TAR624G0696' => 'tar', 'TAR624G0906' => 'tar', 'TAR625G0107' => 'tar', 'TAR626G0015' => 'tar', 'TAR626G1356' => 'tar', 'TAR627G0888' => 'tar', 'TAR628G0399' => 'tar', 'TAR628G1327' => 'tar', 'TAR629G2831' => 'tar', 'TAR629G2874' => 'tar', 'TAR633G1432' => 'tar', 'TAR633G2771' => 'tar', 'THA.LOC104803394' => 'tha', 'THA.LOC104805153' => 'tha', 'THA.LOC104806784' => 'tha', 'THA.LOC104810473' => 'tha', 'THA.LOC104813100' => 'tha', 'THA.LOC104814215' => 'tha', 'THA.LOC104815554' => 'tha', 'THA.LOC104820544' => 'tha', 'THA.LOC104824754' => 'tha', 'THA.LOC104827717' => 'tha', 'Thecc.02G031400' => 'tca', 'Thecc.02G055900' => 'tca', 'Thecc.02G350800' => 'tca', 'Thecc.06G150900' => 'tca', 'Thecc.06G186600' => 'tca', 'Thecc.07G089600' => 'tca', 'Thecc.08G020400' => 'tca', 'Thecc.08G182100' => 'tca', 'Thhalv10000873m.g' => 'esa', 'Thhalv10004185m.g' => 'esa', 'Thhalv10006981m.g' => 'esa', 'Thhalv10007204m.g' => 'esa', 'Thhalv10011374m.g' => 'esa', 'Thhalv10013482m.g' => 'esa', 'Thhalv10017801m.g' => 'esa', 'Thhalv10024983m.g' => 'esa', 'TPR.G12072' => 'tpr', 'TPR.G15769' => 'tpr', 'TPR.G16504' => 'tpr', 'TPR.G16506' => 'tpr', 'TPR.G24345' => 'tpr', 'TPR.G26666' => 'tpr', 'TPR.G27320' => 'tpr', 'TPR.G31819' => 'tpr', 'TPR.G38879' => 'tpr', 'TPR.G39015' => 'tpr', 'TPR.G8819' => 'tpr', 'TWI09G0924' => 'twi', 'TWI12G0811' => 'twi', 'TWI12G1294' => 'twi', 'TWI31G0150' => 'twi', 'TWI36G1262' => 'twi', 'TWI38G1287' => 'twi', 'TWI38G1633' => 'twi', 'TWI38G1982' => 'twi', 'TWI39G0116' => 'twi', 'TWI60G1011' => 'twi', 'TWI63G0171' => 'twi', 'TWI73G0839' => 'twi', 'TWI79G1511' => 'twi', 'unitig_0.g915' => 'ugi', 'unitig_0.g916' => 'ugi', 'unitig_21.g20219' => 'ugi', 'unitig_21.g20416' => 'ugi', 'unitig_578.g16132' => 'ugi', 'unitig_578.g16718' => 'ugi', 'unitig_62.g23481' => 'ugi', 'unitig_744.g24535' => 'ugi', 'unitig_749.g13525' => 'ugi', 'vmacro01248' => 'vma', 'vmacro02290' => 'vma', 'vmacro10946' => 'vma', 'vmacro11865' => 'vma', 'vmacro12493' => 'vma', 'vmacro17322' => 'vma', 'vmacro21599' => 'vma', 'vmacro23041' => 'vma', 'VMungo0251G0004' => 'vmu', 'VMungo0251G2639' => 'vmu', 'VMungo0251G2967' => 'vmu', 'VMungo0540G0864' => 'vmu', 'VMungo0540G1569' => 'vmu', 'VMungo0647G0317' => 'vmu', 'VMungo0720G1373' => 'vmu', 'VMungo0720G1508' => 'vmu', 'VMungo1080G0485' => 'vmu', 'VMungo1215G3177' => 'vmu', 'Zm00001eb112600' => 'zma', 'Zm00001eb120220' => 'zma', 'Zm00001eb153240' => 'zma', 'Zm00001eb168880' => 'zma', 'Zm00001eb213920' => 'zma', 'Zm00001eb228280' => 'zma', 'Zm00001eb254580' => 'zma', 'Zm00001eb272180' => 'zma', 'Zm00001eb293190' => 'zma', 'Zm00001eb322930' => 'zma', 'Zm00001eb353360' => 'zma', 'Zm00001eb353390' => 'zma', 'Zm00001eb353430' => 'zma', 'Zm00001eb353440' => 'zma', 'Zm00001eb353780' => 'zma' ), 'gf_id' => 'HOM05D000499', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000499' ), 'data_identifier' => 'HOM05D000499', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000499', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1066', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p29780' => 'bna', 'A02p33180' => 'bna', 'A03p16470' => 'bna', 'A03p66010' => 'bna', 'A04p25970' => 'bna', 'A06p01270' => 'bna', 'A06p46080' => 'bna', 'A07p11400' => 'bna', 'A08p01840' => 'bna', 'A08p08230' => 'bna', 'A08p25740' => 'bna', 'A09p32070' => 'bna', 'A09p37830' => 'bna', 'A09p42840' => 'bna', 'A09p42850' => 'bna', 'Aa31LG10G2060' => 'aar', 'Aa31LG2G7410' => 'aar', 'Aa31LG6G10200' => 'aar', 'Aa31LG6G16680' => 'aar', 'Aa31LG6G8470' => 'aar', 'Aa31LG9G12730' => 'aar', 'Aa31LG9G13680' => 'aar', 'Aa31LG9G14920' => 'aar', 'Aa31LG9G6650' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4977' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5467' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3254' => 'aag', 'Actinidia02578' => 'ach', 'Actinidia07693' => 'ach', 'Actinidia08413' => 'ach', 'Actinidia08414' => 'ach', 'Actinidia15289' => 'ach', 'Actinidia19871' => 'ach', 'Actinidia21475' => 'ach', 'Actinidia22576' => 'ach', 'Actinidia28327' => 'ach', 'Actinidia32491' => 'ach', 'Actinidia39463' => 'ach', 'Actinidia39571' => 'ach', 'Ah.01g013750' => 'amhyb', 'Ah.01g023210' => 'amhyb', 'Ah.04g164850' => 'amhyb', 'Ah.05g178060' => 'amhyb', 'Ah.07g204270' => 'amhyb', 'Ah.07g208480' => 'amhyb', 'Ah.09g237410' => 'amhyb', 'Ah.14g089460' => 'amhyb', 'AL1G41790' => 'aly', 'AL1G49050' => 'aly', 'AL1G53810' => 'aly', 'AL1G61400' => 'aly', 'AL4G18580' => 'aly', 'AL5G12510' => 'aly', 'AL5G12540' => 'aly', 'AL6G43230' => 'aly', 'AL7G10370' => 'aly', 'AL7G19250' => 'aly', 'AL8G12240' => 'aly', 'AL8G18540' => 'aly', 'Aqoxy1G02409' => 'aox', 'Aqoxy2G03993' => 'aox', 'Aqoxy3G03357' => 'aox', 'Aqoxy4G00785' => 'aox', 'Aqoxy5G02598' => 'aox', 'Aqoxy6G00132' => 'aox', 'Aqoxy7G01776' => 'aox', 'Aqoxy7G02316' => 'aox', 'Aqoxy7G03973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.12AFKW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B8730' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27IQR1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3F75VG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3RE0GA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41TCQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.527VTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FIR39' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5W8UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DA38EV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ63HS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H1I32C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HC27T5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4M8AP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7N3CZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9UVDZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LS1NQA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT1D4B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SKC4TM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCFV76' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF9Q1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQWD9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1ZM88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WE07RT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YCK7VH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJE6Q6' => 'arhy', 'AT1G28240' => 'ath', 'AT1G34550' => 'ath', 'AT1G53040' => 'ath', 'AT2G02910' => 'ath', 'AT4G09630' => 'ath', 'AT4G38500' => 'ath', 'AT5G42660' => 'ath', 'AT5G46220' => 'ath', 'ATR0152G026' => 'atr', 'ATR0564G343' => 'atr', 'ATR0706G151' => 'atr', 'ATR0733G207' => 'atr', 'ATR0751G234' => 'atr', 'ATR0807G048' => 'atr', 'ATR1091G084' => 'atr', 'Atru.chr10.1229' => 'acertr', 'Atru.chr10.1230' => 'acertr', 'Atru.chr10.1874' => 'acertr', 'Atru.chr11.1808' => 'acertr', 'Atru.chr13.1795' => 'acertr', 'Atru.chr13.570' => 'acertr', 'Atru.chr2.2608' => 'acertr', 'Atru.chr2.2609' => 'acertr', 'Atru.chr5.3428' => 'acertr', 'Atru.chr8.1171' => 'acertr', 'AUR62004651' => 'cqu', 'AUR62008675' => 'cqu', 'AUR62010014' => 'cqu', 'AUR62013004' => 'cqu', 'AUR62014825' => 'cqu', 'AUR62015015' => 'cqu', 'AUR62015151' => 'cqu', 'AUR62017020' => 'cqu', 'AUR62019422' => 'cqu', 'AUR62023570' => 'cqu', 'AUR62025571' => 'cqu', 'AUR62029098' => 'cqu', 'AUR62033863' => 'cqu', 'AUR62034296' => 'cqu', 'AUR62040075' => 'cqu', 'BcaB02g07334' => 'bca', 'BcaB02g10575' => 'bca', 'BcaB03g12119' => 'bca', 'BcaB03g12120' => 'bca', 'BcaB03g13945' => 'bca', 'BcaB04g17123' => 'bca', 'BcaB04g17867' => 'bca', 'BcaB04g19839' => 'bca', 'BcaB07g30317' => 'bca', 'BcaB07g32432' => 'bca', 'BcaB07g33362' => 'bca', 'BcaB08g36611' => 'bca', 'BcaC01g00028' => 'bca', 'BcaC01g01356' => 'bca', 'BcaC01g02034' => 'bca', 'BcaC01g06051' => 'bca', 'BcaC03g16839' => 'bca', 'BcaC03g17176' => 'bca', 'BcaC05g26829' => 'bca', 'BcaC06g31490' => 'bca', 'BcaC06g35344' => 'bca', 'BcaC06g36570' => 'bca', 'BcaC07g37537' => 'bca', 'BcaC08g43491' => 'bca', 'BcaC08g43773' => 'bca', 'BcaNung00234' => 'bca', 'BcaNung01982' => 'bca', 'BcaNung03707' => 'bca', 'BcaNung06454' => 'bca', 'BolC2t10762H' => 'bol', 'BolC2t11191H' => 'bol', 'BolC3t14322H' => 'bol', 'BolC3t19747H' => 'bol', 'BolC3t21425H' => 'bol', 'BolC4t27800H' => 'bol', 'BolC5t31423H' => 'bol', 'BolC6t35951H' => 'bol', 'BolC6t36282H' => 'bol', 'BolC7t40678H' => 'bol', 'BolC7t40679H' => 'bol', 'BolC7t42222H' => 'bol', 'BolC7t43492H' => 'bol', 'BolC7t46785H' => 'bol', 'BolC8t47853H' => 'bol', 'BolC9t56805H' => 'bol', 'BraA02t08000Z' => 'bra', 'BraA02t08341Z' => 'bra', 'BraA03t10936Z' => 'bra', 'BraA03t15657Z' => 'bra', 'BraA04t18100Z' => 'bra', 'BraA05t20523Z' => 'bra', 'BraA06t23353Z' => 'bra', 'BraA06t27473Z' => 'bra', 'BraA06t27769Z' => 'bra', 'BraA07t28928Z' => 'bra', 'BraA08t32236Z' => 'bra', 'BraA08t32841Z' => 'bra', 'BraA08t34524Z' => 'bra', 'BraA09t38742Z' => 'bra', 'BraA09t39295Z' => 'bra', 'C02p47180' => 'bna', 'C02p50990' => 'bna', 'C03p19360' => 'bna', 'C03p74950' => 'bna', 'C03p91000' => 'bna', 'C04p63260' => 'bna', 'C05p27050' => 'bna', 'C06p08750' => 'bna', 'C06p11490' => 'bna', 'C07p02820' => 'bna', 'C07p17180' => 'bna', 'C07p29440' => 'bna', 'C07p63730' => 'bna', 'C09p39260' => 'bna', 'CAN.G1164.34' => 'can', 'CAN.G1164.39' => 'can', 'CAN.G1530.3' => 'can', 'CAN.G162.61' => 'can', 'CAN.G176.6' => 'can', 'CAN.G289.49' => 'can', 'CAN.G370.21' => 'can', 'CAN.G370.22' => 'can', 'CAN.G371.117' => 'can', 'CAN.G58.37' => 'can', 'CAN.G588.98' => 'can', 'CANSAT21G2266' => 'cansat', 'CANSAT25G2799' => 'cansat', 'CANSAT35G0862' => 'cansat', 'CANSAT35G1704' => 'cansat', 'CANSAT35G1760' => 'cansat', 'CANSAT56G3971' => 'cansat', 'CANSAT56G4116' => 'cansat', 'CANSAT80G1259' => 'cansat', 'CARHR027730' => 'chi', 'CARHR033880' => 'chi', 'CARHR043270' => 'chi', 'CARHR145330' => 'chi', 'CARHR145340' => 'chi', 'CARHR175570' => 'chi', 'CARHR181570' => 'chi', 'CARHR258470' => 'chi', 'CARHR260490' => 'chi', 'CARHR294220' => 'chi', 'Carub.0001s2668' => 'cru', 'Carub.0001s3257' => 'cru', 'Carub.0001s4220' => 'cru', 'Carub.0005s0179' => 'cru', 'Carub.0006s2807' => 'cru', 'Carub.0007s0039' => 'cru', 'Carub.0008s0169' => 'cru', 'Carub.0008s0636' => 'cru', 'Ca_00338_v3' => 'car', 'Ca_00542_v3' => 'car', 'Ca_01844_v3' => 'car', 'Ca_10611_v3' => 'car', 'Ca_13326_v3' => 'car', 'Ca_17944_v3' => 'car', 'Ca_18546_v3' => 'car', 'Ca_24219_v3' => 'car', 'Ca_29972_v3' => 'car', 'CBR_g3681' => 'cbr', 'CBR_g40021' => 'cbr', 'Cc01_g08140' => 'ccan', 'Cc02_g13410' => 'ccan', 'Cc02_g37480' => 'ccan', 'Cc05_g12030' => 'ccan', 'Cc09_g03370' => 'ccan', 'Cc09_g10300' => 'ccan', 'Cc10_g03530' => 'ccan', 'Cc10_g11380' => 'ccan', 'CDE01G0176' => 'cde', 'CDE02G0675' => 'cde', 'CDE02G0942' => 'cde', 'CDE02G1153' => 'cde', 'CDE02G4177' => 'cde', 'CDE04G2117' => 'cde', 'CDE04G2736' => 'cde', 'CDE08G1161' => 'cde', 'CDE09G1238' => 'cde', 'Cfa000467' => 'cfa', 'Cfa000947' => 'cfa', 'Cfa004969' => 'cfa', 'Cfa005284' => 'cfa', 'Cfa008993' => 'cfa', 'Cfa018187' => 'cfa', 'Cfa018454' => 'cfa', 'Cfa020585' => 'cfa', 'Ciclev10000424m.g' => 'ccl', 'Ciclev10003605m.g' => 'ccl', 'Ciclev10007828m.g' => 'ccl', 'Ciclev10014620m.g' => 'ccl', 'Ciclev10015169m.g' => 'ccl', 'Ciclev10018291m.g' => 'ccl', 'Ciclev10028256m.g' => 'ccl', 'Ciclev10033822m.g' => 'ccl', 'CiPaw.05G060300' => 'cil', 'CiPaw.05G085000' => 'cil', 'CiPaw.06G083700' => 'cil', 'CiPaw.06G120300' => 'cil', 'CiPaw.09G060500' => 'cil', 'CiPaw.09G123800' => 'cil', 'CiPaw.11G169700' => 'cil', 'CiPaw.12G118300' => 'cil', 'CiPaw.15G071000' => 'cil', 'CiPaw.15G081900' => 'cil', 'ClCG01G024610' => 'cla', 'ClCG03G006070' => 'cla', 'ClCG05G019250' => 'cla', 'ClCG09G009500' => 'cla', 'ClCG11G008200' => 'cla', 'ClCG11G018080' => 'cla', 'COL.COLO4_17373' => 'col', 'COL.COLO4_22994' => 'col', 'COL.COLO4_26389' => 'col', 'COL.COLO4_27170' => 'col', 'COL.COLO4_31074' => 'col', 'COL.COLO4_31465' => 'col', 'COL.COLO4_36438' => 'col', 'COL.COLO4_36439' => 'col', 'Cpa.g.c38781' => 'cpa', 'Cpa.g.sc128.12' => 'cpa', 'Cpa.g.sc166.7' => 'cpa', 'Cpa.g.sc166.8' => 'cpa', 'Cpa.g.sc20.111' => 'cpa', 'Cpa.g.sc27.31' => 'cpa', 'Cpa.g.sc64.36' => 'cpa', 'Cpa.g.sc64.37' => 'cpa', 'Cpa.g.sc66.49' => 'cpa', 'Cpa.g.sc80.64' => 'cpa', 'CsaV3_1G012320' => 'csa', 'CsaV3_2G008480' => 'csa', 'CsaV3_2G033450' => 'csa', 'CsaV3_3G044830' => 'csa', 'CsaV3_4G033710' => 'csa', 'CsaV3_6G051730' => 'csa', 'CsaV3_7G025350' => 'csa', 'CSS0001067' => 'camsi', 'CSS0005996' => 'camsi', 'CSS0006590' => 'camsi', 'CSS0009673' => 'camsi', 'CSS0010201' => 'camsi', 'CSS0010549' => 'camsi', 'CSS0011364' => 'camsi', 'CSS0014473' => 'camsi', 'CSS0014961' => 'camsi', 'CSS0020191' => 'camsi', 'CSS0021165' => 'camsi', 'CSS0022306' => 'camsi', 'CSS0030591' => 'camsi', 'CSS0030696' => 'camsi', 'CSS0032653' => 'camsi', 'CSS0037487' => 'camsi', 'CSS0041102' => 'camsi', 'CSS0041261' => 'camsi', 'CSS0046246' => 'camsi', 'CSS0049256' => 'camsi', 'DCAR_004075' => 'dca', 'DCAR_011538' => 'dca', 'DCAR_019553' => 'dca', 'DCAR_020952' => 'dca', 'DCAR_021739' => 'dca', 'DCAR_027407' => 'dca', 'DCAR_027913' => 'dca', 'DCAR_028066' => 'dca', 'Dinv05899' => 'din', 'Dinv07563' => 'din', 'Dinv08010' => 'din', 'Dinv14125' => 'din', 'Dinv20172' => 'din', 'Dinv30743' => 'din', 'Dinv31229' => 'din', 'Dinv34162' => 'din', 'Dinv36028' => 'din', 'Dinv39368' => 'din', 'Dinv40565' => 'din', 'Dinv41706' => 'din', 'Duzib052G0089' => 'dzi', 'Duzib116G0641' => 'dzi', 'Duzib132G0069' => 'dzi', 'Duzib132G1219' => 'dzi', 'Duzib147G0278' => 'dzi', 'Duzib160G0480' => 'dzi', 'Duzib170G0661' => 'dzi', 'Duzib177G0591' => 'dzi', 'Duzib187G1353' => 'dzi', 'Duzib192G0858' => 'dzi', 'Duzib192G0883' => 'dzi', 'Duzib213G0506' => 'dzi', 'Duzib235G0289' => 'dzi', 'Duzib251G0422' => 'dzi', 'ECA232G3898' => 'eca', 'ECA233G5950' => 'eca', 'ECA234G1699' => 'eca', 'ECA234G2421' => 'eca', 'ECA236G0426' => 'eca', 'ECA236G4331' => 'eca', 'ECA248G2573' => 'eca', 'EL10Ac1g00077' => 'bvu', 'EL10Ac1g01746' => 'bvu', 'EL10Ac2g03464' => 'bvu', 'EL10Ac4g08176' => 'bvu', 'EL10Ac7g17521' => 'bvu', 'EL10Ac8g20386' => 'bvu', 'EL10Ac9g21343' => 'bvu', 'EL10Ac9g22688' => 'bvu', 'Eucgr.B03434' => 'egr', 'Eucgr.D00618' => 'egr', 'Eucgr.E02395' => 'egr', 'Eucgr.F01129' => 'egr', 'Eucgr.F02622' => 'egr', 'Eucgr.F04207' => 'egr', 'FAN01G0570' => 'fan', 'FAN03G3351' => 'fan', 'FAN06G3702' => 'fan', 'FAN07G2149' => 'fan', 'FAN10G3758' => 'fan', 'FAN11G1170' => 'fan', 'FAN11G2050' => 'fan', 'FAN11G2724' => 'fan', 'FAN12G1700' => 'fan', 'FAN12G2028' => 'fan', 'FAN15G1160' => 'fan', 'FAN15G3063' => 'fan', 'FAN16G2540' => 'fan', 'FAN16G3077' => 'fan', 'FAN16G3624' => 'fan', 'FAN17G0221' => 'fan', 'FAN20G2492' => 'fan', 'FAN20G2905' => 'fan', 'FAN21G0548' => 'fan', 'FAN21G1300' => 'fan', 'FAN22G0077' => 'fan', 'FAN22G1315' => 'fan', 'FAN24G1280' => 'fan', 'FAN24G1445' => 'fan', 'FAN24G3527' => 'fan', 'FAN25G0464' => 'fan', 'FAN25G2885' => 'fan', 'FAN25G3270' => 'fan', 'FAN27G1101' => 'fan', 'FAN27G2846' => 'fan', 'FAN27G3524' => 'fan', 'FvH4_2g11770' => 'fve', 'FvH4_2g15630' => 'fve', 'FvH4_3g05570' => 'fve', 'FvH4_3g09110' => 'fve', 'FvH4_3g19940' => 'fve', 'FvH4_4g04821' => 'fve', 'FvH4_4g31480' => 'fve', 'FvH4_7g01740' => 'fve', 'Glyma.05G130400' => 'gma', 'Glyma.05G156400' => 'gma', 'Glyma.07G197000' => 'gma', 'Glyma.08G085151' => 'gma', 'Glyma.08G114500' => 'gma', 'Glyma.08G300400' => 'gma', 'Glyma.10G215800' => 'gma', 'Glyma.12G224400' => 'gma', 'Glyma.13G179300' => 'gma', 'Glyma.13G218151' => 'gma', 'Glyma.13G238800' => 'gma', 'Glyma.13G276900' => 'gma', 'Glyma.14G078200' => 'gma', 'Glyma.15G074500' => 'gma', 'Glyma.15G094100' => 'gma', 'Glyma.17G247200' => 'gma', 'Glyma.18G120100' => 'gma', 'Glyma.20G176000' => 'gma', 'Gohir.A01G063600' => 'ghi', 'Gohir.A01G170301' => 'ghi', 'Gohir.A02G060500' => 'ghi', 'Gohir.A05G133850' => 'ghi', 'Gohir.A05G161400' => 'ghi', 'Gohir.A06G012900' => 'ghi', 'Gohir.A06G035901' => 'ghi', 'Gohir.A06G127100' => 'ghi', 'Gohir.A06G210500' => 'ghi', 'Gohir.A08G008650' => 'ghi', 'Gohir.A09G072700' => 'ghi', 'Gohir.A09G088301' => 'ghi', 'Gohir.A10G040600' => 'ghi', 'Gohir.A12G036300' => 'ghi', 'Gohir.A12G143350' => 'ghi', 'Gohir.A12G165500' => 'ghi', 'Gohir.A13G145700' => 'ghi', 'Gohir.D01G050000' => 'ghi', 'Gohir.D01G051366' => 'ghi', 'Gohir.D01G161350' => 'ghi', 'Gohir.D02G065900' => 'ghi', 'Gohir.D05G164200' => 'ghi', 'Gohir.D05G355500' => 'ghi', 'Gohir.D06G010400' => 'ghi', 'Gohir.D06G111250' => 'ghi', 'Gohir.D06G132000' => 'ghi', 'Gohir.D06G210500' => 'ghi', 'Gohir.D07G165675' => 'ghi', 'Gohir.D08G062240' => 'ghi', 'Gohir.D08G086101' => 'ghi', 'Gohir.D08G138060' => 'ghi', 'Gohir.D09G072300' => 'ghi', 'Gohir.D10G041400' => 'ghi', 'Gohir.D11G191020' => 'ghi', 'Gohir.D11G212066' => 'ghi', 'Gohir.D12G036300' => 'ghi', 'Gohir.D12G168600' => 'ghi', 'Gohir.D13G150600' => 'ghi', 'Gorai.001G057300' => 'gra', 'Gorai.002G069900' => 'gra', 'Gorai.002G200000' => 'gra', 'Gorai.003G067600' => 'gra', 'Gorai.005G074800' => 'gra', 'Gorai.006G087300' => 'gra', 'Gorai.008G037500' => 'gra', 'Gorai.008G181400' => 'gra', 'Gorai.009G169400' => 'gra', 'Gorai.009G387900' => 'gra', 'Gorai.010G013300' => 'gra', 'Gorai.010G153800' => 'gra', 'Gorai.010G255800' => 'gra', 'Gorai.011G043700' => 'gra', 'Gorai.011G198900' => 'gra', 'Gorai.013G168400' => 'gra', 'GSVIVG01005212001' => 'vvi', 'GSVIVG01006163001' => 'vvi', 'GSVIVG01009625001' => 'vvi', 'GSVIVG01014338001' => 'vvi', 'GSVIVG01020005001' => 'vvi', 'GSVIVG01021450001' => 'vvi', 'GSVIVG01023975001' => 'vvi', 'GSVIVG01034490001' => 'vvi', 'HanXRQChr04g0112071' => 'han', 'HanXRQChr05g0131151' => 'han', 'HanXRQChr09g0262371' => 'han', 'HanXRQChr09g0268401' => 'han', 'HanXRQChr10g0279241' => 'han', 'HanXRQChr10g0297961' => 'han', 'HanXRQChr11g0326231' => 'han', 'HanXRQChr11g0328471' => 'han', 'HanXRQChr16g0507941' => 'han', 'HanXRQChr17g0560211' => 'han', 'Haze_02108' => 'cav', 'Haze_02428' => 'cav', 'Haze_05593' => 'cav', 'Haze_06448' => 'cav', 'Haze_09427' => 'cav', 'Haze_12022' => 'cav', 'Haze_17612' => 'cav', 'Haze_17928' => 'cav', 'Hma1.2p1_0032F.1_g019250' => 'hma', 'Hma1.2p1_0163F.1_g072690' => 'hma', 'Hma1.2p1_0265F.1_g106710' => 'hma', 'Hma1.2p1_0286F.1_g113970' => 'hma', 'Hma1.2p1_0363F.1_g136640' => 'hma', 'Hma1.2p1_0584F.1_g183470' => 'hma', 'Hma1.2p1_0885F.1_g232570' => 'hma', 'HPP92_006022' => 'vpl', 'HPP92_007320' => 'vpl', 'HPP92_011521' => 'vpl', 'HPP92_019387' => 'vpl', 'HPP92_024038' => 'vpl', 'Hund05891' => 'sun', 'Hund06450' => 'sun', 'Hund12053' => 'sun', 'Hund16800' => 'sun', 'Hund21222' => 'sun', 'Hund22896' => 'sun', 'Hund23746' => 'sun', 'Hund27083' => 'sun', 'Lalb_Chr02g0141831' => 'lal', 'Lalb_Chr02g0141841' => 'lal', 'Lalb_Chr05g0220411' => 'lal', 'Lalb_Chr06g0162081' => 'lal', 'Lalb_Chr09g0327651' => 'lal', 'Lalb_Chr13g0295051' => 'lal', 'Lalb_Chr15g0086801' => 'lal', 'Lalb_Chr16g0383781' => 'lal', 'Lalb_Chr16g0383791' => 'lal', 'Lalb_Chr18g0055441' => 'lal', 'Lalb_Chr18g0059611' => 'lal', 'Lalb_Chr20g0109661' => 'lal', 'Lalb_Chr20g0109831' => 'lal', 'Lalb_Chr20g0121871' => 'lal', 'Lalb_Chr22g0355361' => 'lal', 'Lalb_Chr25g0286371' => 'lal', 'Lj1A1187G43' => 'lonja', 'Lj1A1205T50' => 'lonja', 'Lj1A800G33' => 'lonja', 'Lj1C1187T7' => 'lonja', 'Lj1C843T11' => 'lonja', 'Lj1g0010940' => 'lja', 'Lj2A288T69' => 'lonja', 'Lj3g0024276' => 'lja', 'Lj4A47T76' => 'lonja', 'Lj4g0005805' => 'lja', 'Lj4g0006097' => 'lja', 'Lj4g0008528' => 'lja', 'Lj4g0024907' => 'lja', 'Lj5g0012472' => 'lja', 'Lj5g0018648' => 'lja', 'Lj6C789G1' => 'lonja', 'Lj6g0004000' => 'lja', 'Lj7A292G67' => 'lonja', 'Lj7A292T64' => 'lonja', 'Lj9A400T58' => 'lonja', 'Lsat_1_v5_gn_1_126181' => 'lsa', 'Lsat_1_v5_gn_4_123041' => 'lsa', 'Lsat_1_v5_gn_4_133620' => 'lsa', 'Lsat_1_v5_gn_4_53221' => 'lsa', 'Lsat_1_v5_gn_4_71961' => 'lsa', 'Lsat_1_v5_gn_7_105241' => 'lsa', 'Lsat_1_v5_gn_7_21361' => 'lsa', 'Lsat_1_v5_gn_7_28860' => 'lsa', 'Lsat_1_v5_gn_7_31260' => 'lsa', 'Lsat_1_v5_gn_8_52801' => 'lsa', 'Manes.02G191400' => 'mes', 'Manes.03G110100' => 'mes', 'Manes.04G071100' => 'mes', 'Manes.05G100500' => 'mes', 'Manes.05G164700' => 'mes', 'Manes.15G087000' => 'mes', 'Manes.15G121500' => 'mes', 'Manes.16G028300' => 'mes', 'Manes.17G046100' => 'mes', 'Manes.17G069800' => 'mes', 'Manes.18G100500' => 'mes', 'Mapoly0002s0109' => 'mpo', 'Mapoly0024s0007' => 'mpo', 'Mapoly0089s0032' => 'mpo', 'MBI04_g42241_MAGBIO' => 'mbi', 'MBI05_g11988_MAGBIO' => 'mbi', 'MBI05_g35452_MAGBIO' => 'mbi', 'MBI07_g30179_MAGBIO' => 'mbi', 'MBI07_g35859_MAGBIO' => 'mbi', 'MBI07_g35860_MAGBIO' => 'mbi', 'MBI07_g37166_MAGBIO' => 'mbi', 'MBI08_g18172_MAGBIO' => 'mbi', 'MBI09_g08441_MAGBIO' => 'mbi', 'MBI13_g01676_MAGBIO' => 'mbi', 'MBI14_g42955_MAGBIO' => 'mbi', 'MBI16_g13161_MAGBIO' => 'mbi', 'MBI17_g27204_MAGBIO' => 'mbi', 'MBI19_g21595_MAGBIO' => 'mbi', 'MD00G1148400' => 'mdo', 'MD02G1301200' => 'mdo', 'MD03G1227800' => 'mdo', 'MD05G1041100' => 'mdo', 'MD05G1124800' => 'mdo', 'MD05G1284000' => 'mdo', 'MD05G1338800' => 'mdo', 'MD05G1338900' => 'mdo', 'MD07G1022800' => 'mdo', 'MD10G1047500' => 'mdo', 'MD10G1127500' => 'mdo', 'MD10G1262300' => 'mdo', 'MD10G1293800' => 'mdo', 'MD16G1074300' => 'mdo', 'Medtr1g021670' => 'mtr', 'Medtr1g096320' => 'mtr', 'Medtr2g013690' => 'mtr', 'Medtr2g019450' => 'mtr', 'Medtr2g085170' => 'mtr', 'Medtr4g088785' => 'mtr', 'Medtr8g055930' => 'mtr', 'Medtr8g085850' => 'mtr', 'MELO3C002605.2' => 'cme', 'MELO3C003891.2' => 'cme', 'MELO3C004012.2' => 'cme', 'MELO3C007134.2' => 'cme', 'MELO3C008118.2' => 'cme', 'MELO3C016700.2' => 'cme', 'MELO3C024127.2' => 'cme', 'MELO3C033361.2' => 'cme', 'MELO3C033362.2' => 'cme', 'Migut.C00430' => 'egut', 'Migut.C01246' => 'egut', 'Migut.E00101' => 'egut', 'Migut.H01486' => 'egut', 'Migut.H01939' => 'egut', 'Migut.K00360' => 'egut', 'Migut.M00910' => 'egut', 'Migut.M01139' => 'egut', 'Migut.N02677' => 'egut', 'MSTRG.13252' => 'ama', 'MSTRG.14701' => 'ama', 'MSTRG.1521' => 'ama', 'MSTRG.15884' => 'ama', 'MSTRG.16242' => 'ama', 'MSTRG.22285' => 'ama', 'MSTRG.22444' => 'ama', 'MSTRG.2349' => 'ama', 'MSTRG.26308' => 'ama', 'MSTRG.28296' => 'ama', 'MSTRG.9895' => 'ama', 'Nitab4.5_0000110g0060' => 'nta', 'Nitab4.5_0000420g0130' => 'nta', 'Nitab4.5_0000422g0030' => 'nta', 'Nitab4.5_0000560g0180' => 'nta', 'Nitab4.5_0000703g0100' => 'nta', 'Nitab4.5_0000786g0200' => 'nta', 'Nitab4.5_0001336g0020' => 'nta', 'Nitab4.5_0001796g0030' => 'nta', 'Nitab4.5_0003348g0060' => 'nta', 'Nitab4.5_0003698g0040' => 'nta', 'Nitab4.5_0003942g0090' => 'nta', 'Nitab4.5_0004775g0070' => 'nta', 'Nitab4.5_0004864g0030' => 'nta', 'Nitab4.5_0005615g0020' => 'nta', 'Nitab4.5_0009288g0030' => 'nta', 'Nitab4.5_0009341g0010' => 'nta', 'Nitab4.5_0009535g0010' => 'nta', 'Nn1g03995' => 'nnu', 'Nn1g04100' => 'nnu', 'Nn1g06530' => 'nnu', 'Nn3g16404' => 'nnu', 'Nn3g17212' => 'nnu', 'Nn3g20776' => 'nnu', 'Nn3g21923' => 'nnu', 'Nn5g27737' => 'nnu', 'Nn5g29461' => 'nnu', 'Nn7g38355' => 'nnu', 'Nn8g39873' => 'nnu', 'Oeu000548.2' => 'oeu', 'Oeu004672.1' => 'oeu', 'Oeu015605.2' => 'oeu', 'Oeu016092.1' => 'oeu', 'Oeu017879.3' => 'oeu', 'Oeu024910.1' => 'oeu', 'Oeu028965.1' => 'oeu', 'Oeu031269.1' => 'oeu', 'Oeu031270.1' => 'oeu', 'Oeu032535.1' => 'oeu', 'Oeu034151.1' => 'oeu', 'Oeu034152.1' => 'oeu', 'Oeu034588.2' => 'oeu', 'Oeu050846.1' => 'oeu', 'Oeu050849.2' => 'oeu', 'Oeu051063.2' => 'oeu', 'Oeu052368.1' => 'oeu', 'Oeu052370.1' => 'oeu', 'Os01g0210400' => 'osa', 'Os01g0304300' => 'osa', 'Os01g0749100' => 'osa', 'Os02g0745800' => 'osa', 'Os03g0769050' => 'osa', 'Os05g0531500' => 'osa', 'Os06g0724300' => 'osa', 'Os11g0198100' => 'osa', 'Peaxi162Scf00069g01425' => 'pax', 'Peaxi162Scf00280g00811' => 'pax', 'Peaxi162Scf00310g00615' => 'pax', 'Peaxi162Scf00362g00542' => 'pax', 'Peaxi162Scf00461g00310' => 'pax', 'Peaxi162Scf00530g00118' => 'pax', 'Peaxi162Scf00541g00057' => 'pax', 'Peaxi162Scf00661g00017' => 'pax', 'Peaxi162Scf00926g00027' => 'pax', 'Peaxi162Scf01064g00263' => 'pax', 'Peaxi162Scf01211g00135' => 'pax', 'PGR004G2336' => 'pgr', 'PGR042G0327' => 'pgr', 'PGR042G1957' => 'pgr', 'PGR042G2003' => 'pgr', 'PGR042G3929' => 'pgr', 'PGR083G1137' => 'pgr', 'PGR083G1364' => 'pgr', 'PGSC0003DMG400003381' => 'stu', 'PGSC0003DMG400003417' => 'stu', 'PGSC0003DMG400008981' => 'stu', 'PGSC0003DMG400012417' => 'stu', 'PGSC0003DMG400012823' => 'stu', 'PGSC0003DMG400016885' => 'stu', 'PGSC0003DMG400022812' => 'stu', 'PGSC0003DMG400029726' => 'stu', 'PGSC0003DMG401009243' => 'stu', 'PGSC0003DMG401031505' => 'stu', 'PGSC0003DMG402031505' => 'stu', 'Phvul.001G017600' => 'pvu', 'Phvul.002G193500' => 'pvu', 'Phvul.002G228900' => 'pvu', 'Phvul.002G236800' => 'pvu', 'Phvul.003G049500' => 'pvu', 'Phvul.005G072000' => 'pvu', 'Phvul.006G164800' => 'pvu', 'Phvul.006G185100' => 'pvu', 'Phvul.007G090000' => 'pvu', 'Potri.001G399800' => 'ptr', 'Potri.002G149900' => 'ptr', 'Potri.004G044100' => 'ptr', 'Potri.004G177600' => 'ptr', 'Potri.009G138000' => 'ptr', 'Potri.010G094000' => 'ptr', 'Potri.011G053000' => 'ptr', 'Potri.011G119300' => 'ptr', 'Potri.013G113700' => 'ptr', 'Potri.018G107800' => 'ptr', 'Potri.019G084100' => 'ptr', 'Pp3c14_23720' => 'ppa', 'Pp3c16_6340' => 'ppa', 'Pp3c23_13420' => 'ppa', 'Pp3c24_2740' => 'ppa', 'Pp3c25_860' => 'ppa', 'Pp3c8_21750' => 'ppa', 'Prupe.1G273000' => 'ppe', 'Prupe.1G273700' => 'ppe', 'Prupe.1G274100' => 'ppe', 'Prupe.2G023300' => 'ppe', 'Prupe.4G048000' => 'ppe', 'Prupe.4G080400' => 'ppe', 'Prupe.4G181200' => 'ppe', 'Prupe.8G056900' => 'ppe', 'Prupe.8G168700' => 'ppe', 'Psat1g189080' => 'psa', 'Psat1g204760' => 'psa', 'Psat4g175560' => 'psa', 'Psat4g177720' => 'psa', 'Psat5g244240' => 'psa', 'Psat6g010720' => 'psa', 'Psat6g187200' => 'psa', 'Psat7g072040' => 'psa', 'PSO017G3501' => 'pso', 'PSO063G2148' => 'pso', 'PSO063G5608' => 'pso', 'PSO210G6392' => 'pso', 'PSO541G2319' => 'pso', 'PSO541G2836' => 'pso', 'PSO541G4012' => 'pso', 'PSO541G6253' => 'pso', 'PSO675G0580' => 'pso', 'PSO675G0856' => 'pso', 'PSO675G5635' => 'pso', 'PSO675G9157' => 'pso', 'PSO832G1660' => 'pso', 'PSO832G1969' => 'pso', 'QL02p007186' => 'qlo', 'QL02p033904' => 'qlo', 'QL03p064391' => 'qlo', 'QL05p040593' => 'qlo', 'QL05p058242' => 'qlo', 'QL08p021825' => 'qlo', 'QL11p004981' => 'qlo', 'RcHm_v2.0_Chr1g0318301' => 'rch', 'RcHm_v2.0_Chr4g0418501' => 'rch', 'RcHm_v2.0_Chr4g0439971' => 'rch', 'RcHm_v2.0_Chr5g0008541' => 'rch', 'RcHm_v2.0_Chr5g0014101' => 'rch', 'RcHm_v2.0_Chr5g0014131' => 'rch', 'RcHm_v2.0_Chr5g0033621' => 'rch', 'RcHm_v2.0_Chr6g0272041' => 'rch', 'RcHm_v2.0_Chr6g0278831' => 'rch', 'Rhsim02G0130400' => 'rsi', 'Rhsim02G0171100' => 'rsi', 'Rhsim05G0053000' => 'rsi', 'Rhsim05G0053100' => 'rsi', 'Rhsim06G0096500' => 'rsi', 'Rhsim06G0096600' => 'rsi', 'Rhsim06G0199100' => 'rsi', 'Rhsim12G0062300' => 'rsi', 'Rhsim12G0062800' => 'rsi', 'Sabra02G0118600' => 'sbr', 'Sabra04G0027300' => 'sbr', 'Sabra04G0119500' => 'sbr', 'Sabra08G0112500' => 'sbr', 'Sabra11G0036800' => 'sbr', 'Sabra11G0103800' => 'sbr', 'Sabra13G0096300' => 'sbr', 'Sabra16G0262300' => 'sbr', 'Sabra18G0091700' => 'sbr', 'Sabra19G0095400' => 'sbr', 'SalBow6G3080' => 'sbo', 'SalBow7G1157' => 'sbo', 'SalBow7G2123' => 'sbo', 'SalBow7G2285' => 'sbo', 'SalBow7G3537' => 'sbo', 'SalBow8G2947' => 'sbo', 'SalBow8G4463' => 'sbo', 'SalBow8G5466' => 'sbo', 'Sc01g0001750' => 'sci', 'Sc02g0006640' => 'sci', 'Sc02g0006670' => 'sci', 'Sc04g0008220' => 'sci', 'Sc05g0006190' => 'sci', 'Sc08g0002760' => 'sci', 'Sc17g0006170' => 'sci', 'Sc22g0002050' => 'sci', 'Sc23g0001190' => 'sci', 'Sc24g0000980' => 'sci', 'Sed0006245' => 'sed', 'Sed0007543' => 'sed', 'Sed0009411' => 'sed', 'Sed0010765' => 'sed', 'Sed0012944' => 'sed', 'Sed0014682' => 'sed', 'Sed0016174' => 'sed', 'Sed0016796' => 'sed', 'Sed0020317' => 'sed', 'Sed0021467' => 'sed', 'SEGI_01316' => 'sgi', 'SEGI_03374' => 'sgi', 'SEGI_16265' => 'sgi', 'SEGI_18569' => 'sgi', 'SEGI_20351' => 'sgi', 'SEGI_26395' => 'sgi', 'SEGI_29469' => 'sgi', 'SEGI_34771' => 'sgi', 'SEGI_36769' => 'sgi', 'SEGI_37139' => 'sgi', 'SGA_v2.0_scaffold100G29687' => 'sas', 'SGA_v2.0_scaffold118G32472' => 'sas', 'SGA_v2.0_scaffold14G07051' => 'sas', 'SGA_v2.0_scaffold183G39845' => 'sas', 'SGA_v2.0_scaffold1G00174' => 'sas', 'SGA_v2.0_scaffold22G09714' => 'sas', 'SGA_v2.0_scaffold333G48992' => 'sas', 'SGA_v2.0_scaffold46G17491' => 'sas', 'SGA_v2.0_scaffold49G18294' => 'sas', 'SGA_v2.0_scaffold63G21658' => 'sas', 'SHI01741' => 'shi', 'SHI05771' => 'shi', 'SHI18077' => 'shi', 'SHI20525' => 'shi', 'SHI20527' => 'shi', 'SHI20528' => 'shi', 'SMO172G0185' => 'smo', 'SMO198G0020' => 'smo', 'SMO351G0006' => 'smo', 'SMO356G0118' => 'smo', 'SMO358G0296' => 'smo', 'SMO367G0079' => 'smo', 'SMO367G1277' => 'smo', 'Solyc01g014220.3' => 'sly', 'Solyc01g111770.2' => 'sly', 'Solyc02g078180.3' => 'sly', 'Solyc03g006430.3' => 'sly', 'Solyc03g006456.1' => 'sly', 'Solyc03g079860.2' => 'sly', 'Solyc04g079770.3' => 'sly', 'Solyc05g007430.4' => 'sly', 'Solyc07g063150.3' => 'sly', 'Solyc08g016620.3' => 'sly', 'Solyc09g057590.3' => 'sly', 'Solyc09g057600.1' => 'sly', 'Solyc10g009050.3' => 'sly', 'Solyc11g017420.2' => 'sly', 'Sopen01g053810' => 'spe', 'Sopen02g023040' => 'spe', 'Sopen03g002440' => 'spe', 'Sopen04g033350' => 'spe', 'Sopen05g003310' => 'spe', 'Sopen07g004050' => 'spe', 'Sopen07g031340' => 'spe', 'Sopen08g006990' => 'spe', 'Sopen10g004830' => 'spe', 'Sopen11g009370' => 'spe', 'Sp1g24450' => 'spa', 'Sp1g29670' => 'spa', 'Sp1g39600' => 'spa', 'Sp2g11080' => 'spa', 'Sp2g13970' => 'spa', 'Sp4g16130' => 'spa', 'Sp6g13080' => 'spa', 'Sp7g37270' => 'spa', 'TAR371G0065' => 'tar', 'TAR376G0340' => 'tar', 'TAR376G0435' => 'tar', 'TAR381G0002' => 'tar', 'TAR381G1236' => 'tar', 'TAR624G0055' => 'tar', 'TAR624G0324' => 'tar', 'TAR624G0696' => 'tar', 'TAR624G0906' => 'tar', 'TAR625G0107' => 'tar', 'TAR626G0015' => 'tar', 'TAR626G1356' => 'tar', 'TAR627G0888' => 'tar', 'TAR628G0399' => 'tar', 'TAR628G1327' => 'tar', 'TAR629G2831' => 'tar', 'TAR629G2874' => 'tar', 'TAR633G1432' => 'tar', 'TAR633G2771' => 'tar', 'THA.LOC104803394' => 'tha', 'THA.LOC104805153' => 'tha', 'THA.LOC104806784' => 'tha', 'THA.LOC104810473' => 'tha', 'THA.LOC104813100' => 'tha', 'THA.LOC104814215' => 'tha', 'THA.LOC104815554' => 'tha', 'THA.LOC104820544' => 'tha', 'THA.LOC104824754' => 'tha', 'THA.LOC104827717' => 'tha', 'Thecc.02G031400' => 'tca', 'Thecc.02G055900' => 'tca', 'Thecc.02G350800' => 'tca', 'Thecc.06G150900' => 'tca', 'Thecc.06G186600' => 'tca', 'Thecc.07G089600' => 'tca', 'Thecc.08G020400' => 'tca', 'Thecc.08G182100' => 'tca', 'Thhalv10000873m.g' => 'esa', 'Thhalv10004185m.g' => 'esa', 'Thhalv10006981m.g' => 'esa', 'Thhalv10007204m.g' => 'esa', 'Thhalv10011374m.g' => 'esa', 'Thhalv10013482m.g' => 'esa', 'Thhalv10017801m.g' => 'esa', 'Thhalv10024983m.g' => 'esa', 'TPR.G12072' => 'tpr', 'TPR.G15769' => 'tpr', 'TPR.G16504' => 'tpr', 'TPR.G16506' => 'tpr', 'TPR.G24345' => 'tpr', 'TPR.G26666' => 'tpr', 'TPR.G27320' => 'tpr', 'TPR.G31819' => 'tpr', 'TPR.G38879' => 'tpr', 'TPR.G39015' => 'tpr', 'TPR.G8819' => 'tpr', 'TWI09G0924' => 'twi', 'TWI12G0811' => 'twi', 'TWI12G1294' => 'twi', 'TWI31G0150' => 'twi', 'TWI36G1262' => 'twi', 'TWI38G1287' => 'twi', 'TWI38G1633' => 'twi', 'TWI38G1982' => 'twi', 'TWI39G0116' => 'twi', 'TWI60G1011' => 'twi', 'TWI63G0171' => 'twi', 'TWI73G0839' => 'twi', 'TWI79G1511' => 'twi', 'unitig_0.g915' => 'ugi', 'unitig_0.g916' => 'ugi', 'unitig_21.g20219' => 'ugi', 'unitig_21.g20416' => 'ugi', 'unitig_578.g16132' => 'ugi', 'unitig_578.g16718' => 'ugi', 'unitig_62.g23481' => 'ugi', 'unitig_744.g24535' => 'ugi', 'unitig_749.g13525' => 'ugi', 'vmacro01248' => 'vma', 'vmacro02290' => 'vma', 'vmacro10946' => 'vma', 'vmacro11865' => 'vma', 'vmacro12493' => 'vma', 'vmacro17322' => 'vma', 'vmacro21599' => 'vma', 'vmacro23041' => 'vma', 'VMungo0251G0004' => 'vmu', 'VMungo0251G2639' => 'vmu', 'VMungo0251G2967' => 'vmu', 'VMungo0540G0864' => 'vmu', 'VMungo0540G1569' => 'vmu', 'VMungo0647G0317' => 'vmu', 'VMungo0720G1373' => 'vmu', 'VMungo0720G1508' => 'vmu', 'VMungo1080G0485' => 'vmu', 'VMungo1215G3177' => 'vmu', 'Zm00001eb112600' => 'zma', 'Zm00001eb120220' => 'zma', 'Zm00001eb153240' => 'zma', 'Zm00001eb168880' => 'zma', 'Zm00001eb213920' => 'zma', 'Zm00001eb228280' => 'zma', 'Zm00001eb254580' => 'zma', 'Zm00001eb272180' => 'zma', 'Zm00001eb293190' => 'zma', 'Zm00001eb322930' => 'zma', 'Zm00001eb353360' => 'zma', 'Zm00001eb353390' => 'zma', 'Zm00001eb353430' => 'zma', 'Zm00001eb353440' => 'zma', 'Zm00001eb353780' => 'zma' ) $gf_id = 'HOM05D000499' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000499' ) $data_identifier = 'HOM05D000499' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 29, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 12, 'amhyb' => (int) 8, 'aly' => (int) 12, 'aox' => (int) 9, 'arhy' => (int) 26, 'ath' => (int) 8, 'atr' => (int) 7, 'acertr' => (int) 10, 'cqu' => (int) 15, 'bca' => (int) 29, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 11, 'cansat' => (int) 8, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 9, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 8, 'cpa' => (int) 10, 'csa' => (int) 7, 'camsi' => (int) 20, 'dca' => (int) 8, 'din' => (int) 12, 'dzi' => (int) 14, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 6, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 38, 'gra' => (int) 16, 'vvi' => (int) 8, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 5, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 11, 'lja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 11, 'mpo' => (int) 3, 'mbi' => (int) 14, 'mdo' => (int) 14, 'mtr' => (int) 8, 'cme' => (int) 9, 'egut' => (int) 9, 'ama' => (int) 11, 'nta' => (int) 17, 'nnu' => (int) 11, 'oeu' => (int) 18, 'osa' => (int) 8, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 6, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 9, 'rsi' => (int) 9, 'sbr' => (int) 10, 'sbo' => (int) 8, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 10, 'sas' => (int) 10, 'shi' => (int) 6, 'smo' => (int) 7, 'sly' => (int) 14, 'spe' => (int) 10, 'spa' => (int) 8, 'tar' => (int) 19, 'tha' => (int) 10, 'tca' => (int) 8, 'esa' => (int) 8, 'tpr' => (int) 11, 'twi' => (int) 13, 'ugi' => (int) 9, 'vma' => (int) 8, 'vmu' => (int) 10, 'zma' => (int) 15 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb353780' $species_info = array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ) $local_species = 'cqu' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000499', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1066', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p29780' => 'bna', 'A02p33180' => 'bna', 'A03p16470' => 'bna', 'A03p66010' => 'bna', 'A04p25970' => 'bna', 'A06p01270' => 'bna', 'A06p46080' => 'bna', 'A07p11400' => 'bna', 'A08p01840' => 'bna', 'A08p08230' => 'bna', 'A08p25740' => 'bna', 'A09p32070' => 'bna', 'A09p37830' => 'bna', 'A09p42840' => 'bna', 'A09p42850' => 'bna', 'Aa31LG10G2060' => 'aar', 'Aa31LG2G7410' => 'aar', 'Aa31LG6G10200' => 'aar', 'Aa31LG6G16680' => 'aar', 'Aa31LG6G8470' => 'aar', 'Aa31LG9G12730' => 'aar', 'Aa31LG9G13680' => 'aar', 'Aa31LG9G14920' => 'aar', 'Aa31LG9G6650' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4977' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5467' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3254' => 'aag', 'Actinidia02578' => 'ach', 'Actinidia07693' => 'ach', 'Actinidia08413' => 'ach', 'Actinidia08414' => 'ach', 'Actinidia15289' => 'ach', 'Actinidia19871' => 'ach', 'Actinidia21475' => 'ach', 'Actinidia22576' => 'ach', 'Actinidia28327' => 'ach', 'Actinidia32491' => 'ach', 'Actinidia39463' => 'ach', 'Actinidia39571' => 'ach', 'Ah.01g013750' => 'amhyb', 'Ah.01g023210' => 'amhyb', 'Ah.04g164850' => 'amhyb', 'Ah.05g178060' => 'amhyb', 'Ah.07g204270' => 'amhyb', 'Ah.07g208480' => 'amhyb', 'Ah.09g237410' => 'amhyb', 'Ah.14g089460' => 'amhyb', 'AL1G41790' => 'aly', 'AL1G49050' => 'aly', 'AL1G53810' => 'aly', 'AL1G61400' => 'aly', 'AL4G18580' => 'aly', 'AL5G12510' => 'aly', 'AL5G12540' => 'aly', 'AL6G43230' => 'aly', 'AL7G10370' => 'aly', 'AL7G19250' => 'aly', 'AL8G12240' => 'aly', 'AL8G18540' => 'aly', 'Aqoxy1G02409' => 'aox', 'Aqoxy2G03993' => 'aox', 'Aqoxy3G03357' => 'aox', 'Aqoxy4G00785' => 'aox', 'Aqoxy5G02598' => 'aox', 'Aqoxy6G00132' => 'aox', 'Aqoxy7G01776' => 'aox', 'Aqoxy7G02316' => 'aox', 'Aqoxy7G03973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.12AFKW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B8730' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27IQR1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3F75VG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3RE0GA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41TCQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.527VTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FIR39' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5W8UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DA38EV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ63HS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H1I32C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HC27T5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4M8AP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7N3CZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9UVDZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LS1NQA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT1D4B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SKC4TM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCFV76' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF9Q1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQWD9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1ZM88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WE07RT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YCK7VH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJE6Q6' => 'arhy', 'AT1G28240' => 'ath', 'AT1G34550' => 'ath', 'AT1G53040' => 'ath', 'AT2G02910' => 'ath', 'AT4G09630' => 'ath', 'AT4G38500' => 'ath', 'AT5G42660' => 'ath', 'AT5G46220' => 'ath', 'ATR0152G026' => 'atr', 'ATR0564G343' => 'atr', 'ATR0706G151' => 'atr', 'ATR0733G207' => 'atr', 'ATR0751G234' => 'atr', 'ATR0807G048' => 'atr', 'ATR1091G084' => 'atr', 'Atru.chr10.1229' => 'acertr', 'Atru.chr10.1230' => 'acertr', 'Atru.chr10.1874' => 'acertr', 'Atru.chr11.1808' => 'acertr', 'Atru.chr13.1795' => 'acertr', 'Atru.chr13.570' => 'acertr', 'Atru.chr2.2608' => 'acertr', 'Atru.chr2.2609' => 'acertr', 'Atru.chr5.3428' => 'acertr', 'Atru.chr8.1171' => 'acertr', 'AUR62004651' => 'cqu', 'AUR62008675' => 'cqu', 'AUR62010014' => 'cqu', 'AUR62013004' => 'cqu', 'AUR62014825' => 'cqu', 'AUR62015015' => 'cqu', 'AUR62015151' => 'cqu', 'AUR62017020' => 'cqu', 'AUR62019422' => 'cqu', 'AUR62023570' => 'cqu', 'AUR62025571' => 'cqu', 'AUR62029098' => 'cqu', 'AUR62033863' => 'cqu', 'AUR62034296' => 'cqu', 'AUR62040075' => 'cqu', 'BcaB02g07334' => 'bca', 'BcaB02g10575' => 'bca', 'BcaB03g12119' => 'bca', 'BcaB03g12120' => 'bca', 'BcaB03g13945' => 'bca', 'BcaB04g17123' => 'bca', 'BcaB04g17867' => 'bca', 'BcaB04g19839' => 'bca', 'BcaB07g30317' => 'bca', 'BcaB07g32432' => 'bca', 'BcaB07g33362' => 'bca', 'BcaB08g36611' => 'bca', 'BcaC01g00028' => 'bca', 'BcaC01g01356' => 'bca', 'BcaC01g02034' => 'bca', 'BcaC01g06051' => 'bca', 'BcaC03g16839' => 'bca', 'BcaC03g17176' => 'bca', 'BcaC05g26829' => 'bca', 'BcaC06g31490' => 'bca', 'BcaC06g35344' => 'bca', 'BcaC06g36570' => 'bca', 'BcaC07g37537' => 'bca', 'BcaC08g43491' => 'bca', 'BcaC08g43773' => 'bca', 'BcaNung00234' => 'bca', 'BcaNung01982' => 'bca', 'BcaNung03707' => 'bca', 'BcaNung06454' => 'bca', 'BolC2t10762H' => 'bol', 'BolC2t11191H' => 'bol', 'BolC3t14322H' => 'bol', 'BolC3t19747H' => 'bol', 'BolC3t21425H' => 'bol', 'BolC4t27800H' => 'bol', 'BolC5t31423H' => 'bol', 'BolC6t35951H' => 'bol', 'BolC6t36282H' => 'bol', 'BolC7t40678H' => 'bol', 'BolC7t40679H' => 'bol', 'BolC7t42222H' => 'bol', 'BolC7t43492H' => 'bol', 'BolC7t46785H' => 'bol', 'BolC8t47853H' => 'bol', 'BolC9t56805H' => 'bol', 'BraA02t08000Z' => 'bra', 'BraA02t08341Z' => 'bra', 'BraA03t10936Z' => 'bra', 'BraA03t15657Z' => 'bra', 'BraA04t18100Z' => 'bra', 'BraA05t20523Z' => 'bra', 'BraA06t23353Z' => 'bra', 'BraA06t27473Z' => 'bra', 'BraA06t27769Z' => 'bra', 'BraA07t28928Z' => 'bra', 'BraA08t32236Z' => 'bra', 'BraA08t32841Z' => 'bra', 'BraA08t34524Z' => 'bra', 'BraA09t38742Z' => 'bra', 'BraA09t39295Z' => 'bra', 'C02p47180' => 'bna', 'C02p50990' => 'bna', 'C03p19360' => 'bna', 'C03p74950' => 'bna', 'C03p91000' => 'bna', 'C04p63260' => 'bna', 'C05p27050' => 'bna', 'C06p08750' => 'bna', 'C06p11490' => 'bna', 'C07p02820' => 'bna', 'C07p17180' => 'bna', 'C07p29440' => 'bna', 'C07p63730' => 'bna', 'C09p39260' => 'bna', 'CAN.G1164.34' => 'can', 'CAN.G1164.39' => 'can', 'CAN.G1530.3' => 'can', 'CAN.G162.61' => 'can', 'CAN.G176.6' => 'can', 'CAN.G289.49' => 'can', 'CAN.G370.21' => 'can', 'CAN.G370.22' => 'can', 'CAN.G371.117' => 'can', 'CAN.G58.37' => 'can', 'CAN.G588.98' => 'can', 'CANSAT21G2266' => 'cansat', 'CANSAT25G2799' => 'cansat', 'CANSAT35G0862' => 'cansat', 'CANSAT35G1704' => 'cansat', 'CANSAT35G1760' => 'cansat', 'CANSAT56G3971' => 'cansat', 'CANSAT56G4116' => 'cansat', 'CANSAT80G1259' => 'cansat', 'CARHR027730' => 'chi', 'CARHR033880' => 'chi', 'CARHR043270' => 'chi', 'CARHR145330' => 'chi', 'CARHR145340' => 'chi', 'CARHR175570' => 'chi', 'CARHR181570' => 'chi', 'CARHR258470' => 'chi', 'CARHR260490' => 'chi', 'CARHR294220' => 'chi', 'Carub.0001s2668' => 'cru', 'Carub.0001s3257' => 'cru', 'Carub.0001s4220' => 'cru', 'Carub.0005s0179' => 'cru', 'Carub.0006s2807' => 'cru', 'Carub.0007s0039' => 'cru', 'Carub.0008s0169' => 'cru', 'Carub.0008s0636' => 'cru', 'Ca_00338_v3' => 'car', 'Ca_00542_v3' => 'car', 'Ca_01844_v3' => 'car', 'Ca_10611_v3' => 'car', 'Ca_13326_v3' => 'car', 'Ca_17944_v3' => 'car', 'Ca_18546_v3' => 'car', 'Ca_24219_v3' => 'car', 'Ca_29972_v3' => 'car', 'CBR_g3681' => 'cbr', 'CBR_g40021' => 'cbr', 'Cc01_g08140' => 'ccan', 'Cc02_g13410' => 'ccan', 'Cc02_g37480' => 'ccan', 'Cc05_g12030' => 'ccan', 'Cc09_g03370' => 'ccan', 'Cc09_g10300' => 'ccan', 'Cc10_g03530' => 'ccan', 'Cc10_g11380' => 'ccan', 'CDE01G0176' => 'cde', 'CDE02G0675' => 'cde', 'CDE02G0942' => 'cde', 'CDE02G1153' => 'cde', 'CDE02G4177' => 'cde', 'CDE04G2117' => 'cde', 'CDE04G2736' => 'cde', 'CDE08G1161' => 'cde', 'CDE09G1238' => 'cde', 'Cfa000467' => 'cfa', 'Cfa000947' => 'cfa', 'Cfa004969' => 'cfa', 'Cfa005284' => 'cfa', 'Cfa008993' => 'cfa', 'Cfa018187' => 'cfa', 'Cfa018454' => 'cfa', 'Cfa020585' => 'cfa', 'Ciclev10000424m.g' => 'ccl', 'Ciclev10003605m.g' => 'ccl', 'Ciclev10007828m.g' => 'ccl', 'Ciclev10014620m.g' => 'ccl', 'Ciclev10015169m.g' => 'ccl', 'Ciclev10018291m.g' => 'ccl', 'Ciclev10028256m.g' => 'ccl', 'Ciclev10033822m.g' => 'ccl', 'CiPaw.05G060300' => 'cil', 'CiPaw.05G085000' => 'cil', 'CiPaw.06G083700' => 'cil', 'CiPaw.06G120300' => 'cil', 'CiPaw.09G060500' => 'cil', 'CiPaw.09G123800' => 'cil', 'CiPaw.11G169700' => 'cil', 'CiPaw.12G118300' => 'cil', 'CiPaw.15G071000' => 'cil', 'CiPaw.15G081900' => 'cil', 'ClCG01G024610' => 'cla', 'ClCG03G006070' => 'cla', 'ClCG05G019250' => 'cla', 'ClCG09G009500' => 'cla', 'ClCG11G008200' => 'cla', 'ClCG11G018080' => 'cla', 'COL.COLO4_17373' => 'col', 'COL.COLO4_22994' => 'col', 'COL.COLO4_26389' => 'col', 'COL.COLO4_27170' => 'col', 'COL.COLO4_31074' => 'col', 'COL.COLO4_31465' => 'col', 'COL.COLO4_36438' => 'col', 'COL.COLO4_36439' => 'col', 'Cpa.g.c38781' => 'cpa', 'Cpa.g.sc128.12' => 'cpa', 'Cpa.g.sc166.7' => 'cpa', 'Cpa.g.sc166.8' => 'cpa', 'Cpa.g.sc20.111' => 'cpa', 'Cpa.g.sc27.31' => 'cpa', 'Cpa.g.sc64.36' => 'cpa', 'Cpa.g.sc64.37' => 'cpa', 'Cpa.g.sc66.49' => 'cpa', 'Cpa.g.sc80.64' => 'cpa', 'CsaV3_1G012320' => 'csa', 'CsaV3_2G008480' => 'csa', 'CsaV3_2G033450' => 'csa', 'CsaV3_3G044830' => 'csa', 'CsaV3_4G033710' => 'csa', 'CsaV3_6G051730' => 'csa', 'CsaV3_7G025350' => 'csa', 'CSS0001067' => 'camsi', 'CSS0005996' => 'camsi', 'CSS0006590' => 'camsi', 'CSS0009673' => 'camsi', 'CSS0010201' => 'camsi', 'CSS0010549' => 'camsi', 'CSS0011364' => 'camsi', 'CSS0014473' => 'camsi', 'CSS0014961' => 'camsi', 'CSS0020191' => 'camsi', 'CSS0021165' => 'camsi', 'CSS0022306' => 'camsi', 'CSS0030591' => 'camsi', 'CSS0030696' => 'camsi', 'CSS0032653' => 'camsi', 'CSS0037487' => 'camsi', 'CSS0041102' => 'camsi', 'CSS0041261' => 'camsi', 'CSS0046246' => 'camsi', 'CSS0049256' => 'camsi', 'DCAR_004075' => 'dca', 'DCAR_011538' => 'dca', 'DCAR_019553' => 'dca', 'DCAR_020952' => 'dca', 'DCAR_021739' => 'dca', 'DCAR_027407' => 'dca', 'DCAR_027913' => 'dca', 'DCAR_028066' => 'dca', 'Dinv05899' => 'din', 'Dinv07563' => 'din', 'Dinv08010' => 'din', 'Dinv14125' => 'din', 'Dinv20172' => 'din', 'Dinv30743' => 'din', 'Dinv31229' => 'din', 'Dinv34162' => 'din', 'Dinv36028' => 'din', 'Dinv39368' => 'din', 'Dinv40565' => 'din', 'Dinv41706' => 'din', 'Duzib052G0089' => 'dzi', 'Duzib116G0641' => 'dzi', 'Duzib132G0069' => 'dzi', 'Duzib132G1219' => 'dzi', 'Duzib147G0278' => 'dzi', 'Duzib160G0480' => 'dzi', 'Duzib170G0661' => 'dzi', 'Duzib177G0591' => 'dzi', 'Duzib187G1353' => 'dzi', 'Duzib192G0858' => 'dzi', 'Duzib192G0883' => 'dzi', 'Duzib213G0506' => 'dzi', 'Duzib235G0289' => 'dzi', 'Duzib251G0422' => 'dzi', 'ECA232G3898' => 'eca', 'ECA233G5950' => 'eca', 'ECA234G1699' => 'eca', 'ECA234G2421' => 'eca', 'ECA236G0426' => 'eca', 'ECA236G4331' => 'eca', 'ECA248G2573' => 'eca', 'EL10Ac1g00077' => 'bvu', 'EL10Ac1g01746' => 'bvu', 'EL10Ac2g03464' => 'bvu', 'EL10Ac4g08176' => 'bvu', 'EL10Ac7g17521' => 'bvu', 'EL10Ac8g20386' => 'bvu', 'EL10Ac9g21343' => 'bvu', 'EL10Ac9g22688' => 'bvu', 'Eucgr.B03434' => 'egr', 'Eucgr.D00618' => 'egr', 'Eucgr.E02395' => 'egr', 'Eucgr.F01129' => 'egr', 'Eucgr.F02622' => 'egr', 'Eucgr.F04207' => 'egr', 'FAN01G0570' => 'fan', 'FAN03G3351' => 'fan', 'FAN06G3702' => 'fan', 'FAN07G2149' => 'fan', 'FAN10G3758' => 'fan', 'FAN11G1170' => 'fan', 'FAN11G2050' => 'fan', 'FAN11G2724' => 'fan', 'FAN12G1700' => 'fan', 'FAN12G2028' => 'fan', 'FAN15G1160' => 'fan', 'FAN15G3063' => 'fan', 'FAN16G2540' => 'fan', 'FAN16G3077' => 'fan', 'FAN16G3624' => 'fan', 'FAN17G0221' => 'fan', 'FAN20G2492' => 'fan', 'FAN20G2905' => 'fan', 'FAN21G0548' => 'fan', 'FAN21G1300' => 'fan', 'FAN22G0077' => 'fan', 'FAN22G1315' => 'fan', 'FAN24G1280' => 'fan', 'FAN24G1445' => 'fan', 'FAN24G3527' => 'fan', 'FAN25G0464' => 'fan', 'FAN25G2885' => 'fan', 'FAN25G3270' => 'fan', 'FAN27G1101' => 'fan', 'FAN27G2846' => 'fan', 'FAN27G3524' => 'fan', 'FvH4_2g11770' => 'fve', 'FvH4_2g15630' => 'fve', 'FvH4_3g05570' => 'fve', 'FvH4_3g09110' => 'fve', 'FvH4_3g19940' => 'fve', 'FvH4_4g04821' => 'fve', 'FvH4_4g31480' => 'fve', 'FvH4_7g01740' => 'fve', 'Glyma.05G130400' => 'gma', 'Glyma.05G156400' => 'gma', 'Glyma.07G197000' => 'gma', 'Glyma.08G085151' => 'gma', 'Glyma.08G114500' => 'gma', 'Glyma.08G300400' => 'gma', 'Glyma.10G215800' => 'gma', 'Glyma.12G224400' => 'gma', 'Glyma.13G179300' => 'gma', 'Glyma.13G218151' => 'gma', 'Glyma.13G238800' => 'gma', 'Glyma.13G276900' => 'gma', 'Glyma.14G078200' => 'gma', 'Glyma.15G074500' => 'gma', 'Glyma.15G094100' => 'gma', 'Glyma.17G247200' => 'gma', 'Glyma.18G120100' => 'gma', 'Glyma.20G176000' => 'gma', 'Gohir.A01G063600' => 'ghi', 'Gohir.A01G170301' => 'ghi', 'Gohir.A02G060500' => 'ghi', 'Gohir.A05G133850' => 'ghi', 'Gohir.A05G161400' => 'ghi', 'Gohir.A06G012900' => 'ghi', 'Gohir.A06G035901' => 'ghi', 'Gohir.A06G127100' => 'ghi', 'Gohir.A06G210500' => 'ghi', 'Gohir.A08G008650' => 'ghi', 'Gohir.A09G072700' => 'ghi', 'Gohir.A09G088301' => 'ghi', 'Gohir.A10G040600' => 'ghi', 'Gohir.A12G036300' => 'ghi', 'Gohir.A12G143350' => 'ghi', 'Gohir.A12G165500' => 'ghi', 'Gohir.A13G145700' => 'ghi', 'Gohir.D01G050000' => 'ghi', 'Gohir.D01G051366' => 'ghi', 'Gohir.D01G161350' => 'ghi', 'Gohir.D02G065900' => 'ghi', 'Gohir.D05G164200' => 'ghi', 'Gohir.D05G355500' => 'ghi', 'Gohir.D06G010400' => 'ghi', 'Gohir.D06G111250' => 'ghi', 'Gohir.D06G132000' => 'ghi', 'Gohir.D06G210500' => 'ghi', 'Gohir.D07G165675' => 'ghi', 'Gohir.D08G062240' => 'ghi', 'Gohir.D08G086101' => 'ghi', 'Gohir.D08G138060' => 'ghi', 'Gohir.D09G072300' => 'ghi', 'Gohir.D10G041400' => 'ghi', 'Gohir.D11G191020' => 'ghi', 'Gohir.D11G212066' => 'ghi', 'Gohir.D12G036300' => 'ghi', 'Gohir.D12G168600' => 'ghi', 'Gohir.D13G150600' => 'ghi', 'Gorai.001G057300' => 'gra', 'Gorai.002G069900' => 'gra', 'Gorai.002G200000' => 'gra', 'Gorai.003G067600' => 'gra', 'Gorai.005G074800' => 'gra', 'Gorai.006G087300' => 'gra', 'Gorai.008G037500' => 'gra', 'Gorai.008G181400' => 'gra', 'Gorai.009G169400' => 'gra', 'Gorai.009G387900' => 'gra', 'Gorai.010G013300' => 'gra', 'Gorai.010G153800' => 'gra', 'Gorai.010G255800' => 'gra', 'Gorai.011G043700' => 'gra', 'Gorai.011G198900' => 'gra', 'Gorai.013G168400' => 'gra', 'GSVIVG01005212001' => 'vvi', 'GSVIVG01006163001' => 'vvi', 'GSVIVG01009625001' => 'vvi', 'GSVIVG01014338001' => 'vvi', 'GSVIVG01020005001' => 'vvi', 'GSVIVG01021450001' => 'vvi', 'GSVIVG01023975001' => 'vvi', 'GSVIVG01034490001' => 'vvi', 'HanXRQChr04g0112071' => 'han', 'HanXRQChr05g0131151' => 'han', 'HanXRQChr09g0262371' => 'han', 'HanXRQChr09g0268401' => 'han', 'HanXRQChr10g0279241' => 'han', 'HanXRQChr10g0297961' => 'han', 'HanXRQChr11g0326231' => 'han', 'HanXRQChr11g0328471' => 'han', 'HanXRQChr16g0507941' => 'han', 'HanXRQChr17g0560211' => 'han', 'Haze_02108' => 'cav', 'Haze_02428' => 'cav', 'Haze_05593' => 'cav', 'Haze_06448' => 'cav', 'Haze_09427' => 'cav', 'Haze_12022' => 'cav', 'Haze_17612' => 'cav', 'Haze_17928' => 'cav', 'Hma1.2p1_0032F.1_g019250' => 'hma', 'Hma1.2p1_0163F.1_g072690' => 'hma', 'Hma1.2p1_0265F.1_g106710' => 'hma', 'Hma1.2p1_0286F.1_g113970' => 'hma', 'Hma1.2p1_0363F.1_g136640' => 'hma', 'Hma1.2p1_0584F.1_g183470' => 'hma', 'Hma1.2p1_0885F.1_g232570' => 'hma', 'HPP92_006022' => 'vpl', 'HPP92_007320' => 'vpl', 'HPP92_011521' => 'vpl', 'HPP92_019387' => 'vpl', 'HPP92_024038' => 'vpl', 'Hund05891' => 'sun', 'Hund06450' => 'sun', 'Hund12053' => 'sun', 'Hund16800' => 'sun', 'Hund21222' => 'sun', 'Hund22896' => 'sun', 'Hund23746' => 'sun', 'Hund27083' => 'sun', 'Lalb_Chr02g0141831' => 'lal', 'Lalb_Chr02g0141841' => 'lal', 'Lalb_Chr05g0220411' => 'lal', 'Lalb_Chr06g0162081' => 'lal', 'Lalb_Chr09g0327651' => 'lal', 'Lalb_Chr13g0295051' => 'lal', 'Lalb_Chr15g0086801' => 'lal', 'Lalb_Chr16g0383781' => 'lal', 'Lalb_Chr16g0383791' => 'lal', 'Lalb_Chr18g0055441' => 'lal', 'Lalb_Chr18g0059611' => 'lal', 'Lalb_Chr20g0109661' => 'lal', 'Lalb_Chr20g0109831' => 'lal', 'Lalb_Chr20g0121871' => 'lal', 'Lalb_Chr22g0355361' => 'lal', 'Lalb_Chr25g0286371' => 'lal', 'Lj1A1187G43' => 'lonja', 'Lj1A1205T50' => 'lonja', 'Lj1A800G33' => 'lonja', 'Lj1C1187T7' => 'lonja', 'Lj1C843T11' => 'lonja', 'Lj1g0010940' => 'lja', 'Lj2A288T69' => 'lonja', 'Lj3g0024276' => 'lja', 'Lj4A47T76' => 'lonja', 'Lj4g0005805' => 'lja', 'Lj4g0006097' => 'lja', 'Lj4g0008528' => 'lja', 'Lj4g0024907' => 'lja', 'Lj5g0012472' => 'lja', 'Lj5g0018648' => 'lja', 'Lj6C789G1' => 'lonja', 'Lj6g0004000' => 'lja', 'Lj7A292G67' => 'lonja', 'Lj7A292T64' => 'lonja', 'Lj9A400T58' => 'lonja', 'Lsat_1_v5_gn_1_126181' => 'lsa', 'Lsat_1_v5_gn_4_123041' => 'lsa', 'Lsat_1_v5_gn_4_133620' => 'lsa', 'Lsat_1_v5_gn_4_53221' => 'lsa', 'Lsat_1_v5_gn_4_71961' => 'lsa', 'Lsat_1_v5_gn_7_105241' => 'lsa', 'Lsat_1_v5_gn_7_21361' => 'lsa', 'Lsat_1_v5_gn_7_28860' => 'lsa', 'Lsat_1_v5_gn_7_31260' => 'lsa', 'Lsat_1_v5_gn_8_52801' => 'lsa', 'Manes.02G191400' => 'mes', 'Manes.03G110100' => 'mes', 'Manes.04G071100' => 'mes', 'Manes.05G100500' => 'mes', 'Manes.05G164700' => 'mes', 'Manes.15G087000' => 'mes', 'Manes.15G121500' => 'mes', 'Manes.16G028300' => 'mes', 'Manes.17G046100' => 'mes', 'Manes.17G069800' => 'mes', 'Manes.18G100500' => 'mes', 'Mapoly0002s0109' => 'mpo', 'Mapoly0024s0007' => 'mpo', 'Mapoly0089s0032' => 'mpo', 'MBI04_g42241_MAGBIO' => 'mbi', 'MBI05_g11988_MAGBIO' => 'mbi', 'MBI05_g35452_MAGBIO' => 'mbi', 'MBI07_g30179_MAGBIO' => 'mbi', 'MBI07_g35859_MAGBIO' => 'mbi', 'MBI07_g35860_MAGBIO' => 'mbi', 'MBI07_g37166_MAGBIO' => 'mbi', 'MBI08_g18172_MAGBIO' => 'mbi', 'MBI09_g08441_MAGBIO' => 'mbi', 'MBI13_g01676_MAGBIO' => 'mbi', 'MBI14_g42955_MAGBIO' => 'mbi', 'MBI16_g13161_MAGBIO' => 'mbi', 'MBI17_g27204_MAGBIO' => 'mbi', 'MBI19_g21595_MAGBIO' => 'mbi', 'MD00G1148400' => 'mdo', 'MD02G1301200' => 'mdo', 'MD03G1227800' => 'mdo', 'MD05G1041100' => 'mdo', 'MD05G1124800' => 'mdo', 'MD05G1284000' => 'mdo', 'MD05G1338800' => 'mdo', 'MD05G1338900' => 'mdo', 'MD07G1022800' => 'mdo', 'MD10G1047500' => 'mdo', 'MD10G1127500' => 'mdo', 'MD10G1262300' => 'mdo', 'MD10G1293800' => 'mdo', 'MD16G1074300' => 'mdo', 'Medtr1g021670' => 'mtr', 'Medtr1g096320' => 'mtr', 'Medtr2g013690' => 'mtr', 'Medtr2g019450' => 'mtr', 'Medtr2g085170' => 'mtr', 'Medtr4g088785' => 'mtr', 'Medtr8g055930' => 'mtr', 'Medtr8g085850' => 'mtr', 'MELO3C002605.2' => 'cme', 'MELO3C003891.2' => 'cme', 'MELO3C004012.2' => 'cme', 'MELO3C007134.2' => 'cme', 'MELO3C008118.2' => 'cme', 'MELO3C016700.2' => 'cme', 'MELO3C024127.2' => 'cme', 'MELO3C033361.2' => 'cme', 'MELO3C033362.2' => 'cme', 'Migut.C00430' => 'egut', 'Migut.C01246' => 'egut', 'Migut.E00101' => 'egut', 'Migut.H01486' => 'egut', 'Migut.H01939' => 'egut', 'Migut.K00360' => 'egut', 'Migut.M00910' => 'egut', 'Migut.M01139' => 'egut', 'Migut.N02677' => 'egut', 'MSTRG.13252' => 'ama', 'MSTRG.14701' => 'ama', 'MSTRG.1521' => 'ama', 'MSTRG.15884' => 'ama', 'MSTRG.16242' => 'ama', 'MSTRG.22285' => 'ama', 'MSTRG.22444' => 'ama', 'MSTRG.2349' => 'ama', 'MSTRG.26308' => 'ama', 'MSTRG.28296' => 'ama', 'MSTRG.9895' => 'ama', 'Nitab4.5_0000110g0060' => 'nta', 'Nitab4.5_0000420g0130' => 'nta', 'Nitab4.5_0000422g0030' => 'nta', 'Nitab4.5_0000560g0180' => 'nta', 'Nitab4.5_0000703g0100' => 'nta', 'Nitab4.5_0000786g0200' => 'nta', 'Nitab4.5_0001336g0020' => 'nta', 'Nitab4.5_0001796g0030' => 'nta', 'Nitab4.5_0003348g0060' => 'nta', 'Nitab4.5_0003698g0040' => 'nta', 'Nitab4.5_0003942g0090' => 'nta', 'Nitab4.5_0004775g0070' => 'nta', 'Nitab4.5_0004864g0030' => 'nta', 'Nitab4.5_0005615g0020' => 'nta', 'Nitab4.5_0009288g0030' => 'nta', 'Nitab4.5_0009341g0010' => 'nta', 'Nitab4.5_0009535g0010' => 'nta', 'Nn1g03995' => 'nnu', 'Nn1g04100' => 'nnu', 'Nn1g06530' => 'nnu', 'Nn3g16404' => 'nnu', 'Nn3g17212' => 'nnu', 'Nn3g20776' => 'nnu', 'Nn3g21923' => 'nnu', 'Nn5g27737' => 'nnu', 'Nn5g29461' => 'nnu', 'Nn7g38355' => 'nnu', 'Nn8g39873' => 'nnu', 'Oeu000548.2' => 'oeu', 'Oeu004672.1' => 'oeu', 'Oeu015605.2' => 'oeu', 'Oeu016092.1' => 'oeu', 'Oeu017879.3' => 'oeu', 'Oeu024910.1' => 'oeu', 'Oeu028965.1' => 'oeu', 'Oeu031269.1' => 'oeu', 'Oeu031270.1' => 'oeu', 'Oeu032535.1' => 'oeu', 'Oeu034151.1' => 'oeu', 'Oeu034152.1' => 'oeu', 'Oeu034588.2' => 'oeu', 'Oeu050846.1' => 'oeu', 'Oeu050849.2' => 'oeu', 'Oeu051063.2' => 'oeu', 'Oeu052368.1' => 'oeu', 'Oeu052370.1' => 'oeu', 'Os01g0210400' => 'osa', 'Os01g0304300' => 'osa', 'Os01g0749100' => 'osa', 'Os02g0745800' => 'osa', 'Os03g0769050' => 'osa', 'Os05g0531500' => 'osa', 'Os06g0724300' => 'osa', 'Os11g0198100' => 'osa', 'Peaxi162Scf00069g01425' => 'pax', 'Peaxi162Scf00280g00811' => 'pax', 'Peaxi162Scf00310g00615' => 'pax', 'Peaxi162Scf00362g00542' => 'pax', 'Peaxi162Scf00461g00310' => 'pax', 'Peaxi162Scf00530g00118' => 'pax', 'Peaxi162Scf00541g00057' => 'pax', 'Peaxi162Scf00661g00017' => 'pax', 'Peaxi162Scf00926g00027' => 'pax', 'Peaxi162Scf01064g00263' => 'pax', 'Peaxi162Scf01211g00135' => 'pax', 'PGR004G2336' => 'pgr', 'PGR042G0327' => 'pgr', 'PGR042G1957' => 'pgr', 'PGR042G2003' => 'pgr', 'PGR042G3929' => 'pgr', 'PGR083G1137' => 'pgr', 'PGR083G1364' => 'pgr', 'PGSC0003DMG400003381' => 'stu', 'PGSC0003DMG400003417' => 'stu', 'PGSC0003DMG400008981' => 'stu', 'PGSC0003DMG400012417' => 'stu', 'PGSC0003DMG400012823' => 'stu', 'PGSC0003DMG400016885' => 'stu', 'PGSC0003DMG400022812' => 'stu', 'PGSC0003DMG400029726' => 'stu', 'PGSC0003DMG401009243' => 'stu', 'PGSC0003DMG401031505' => 'stu', 'PGSC0003DMG402031505' => 'stu', 'Phvul.001G017600' => 'pvu', 'Phvul.002G193500' => 'pvu', 'Phvul.002G228900' => 'pvu', 'Phvul.002G236800' => 'pvu', 'Phvul.003G049500' => 'pvu', 'Phvul.005G072000' => 'pvu', 'Phvul.006G164800' => 'pvu', 'Phvul.006G185100' => 'pvu', 'Phvul.007G090000' => 'pvu', 'Potri.001G399800' => 'ptr', 'Potri.002G149900' => 'ptr', 'Potri.004G044100' => 'ptr', 'Potri.004G177600' => 'ptr', 'Potri.009G138000' => 'ptr', 'Potri.010G094000' => 'ptr', 'Potri.011G053000' => 'ptr', 'Potri.011G119300' => 'ptr', 'Potri.013G113700' => 'ptr', 'Potri.018G107800' => 'ptr', 'Potri.019G084100' => 'ptr', 'Pp3c14_23720' => 'ppa', 'Pp3c16_6340' => 'ppa', 'Pp3c23_13420' => 'ppa', 'Pp3c24_2740' => 'ppa', 'Pp3c25_860' => 'ppa', 'Pp3c8_21750' => 'ppa', 'Prupe.1G273000' => 'ppe', 'Prupe.1G273700' => 'ppe', 'Prupe.1G274100' => 'ppe', 'Prupe.2G023300' => 'ppe', 'Prupe.4G048000' => 'ppe', 'Prupe.4G080400' => 'ppe', 'Prupe.4G181200' => 'ppe', 'Prupe.8G056900' => 'ppe', 'Prupe.8G168700' => 'ppe', 'Psat1g189080' => 'psa', 'Psat1g204760' => 'psa', 'Psat4g175560' => 'psa', 'Psat4g177720' => 'psa', 'Psat5g244240' => 'psa', 'Psat6g010720' => 'psa', 'Psat6g187200' => 'psa', 'Psat7g072040' => 'psa', 'PSO017G3501' => 'pso', 'PSO063G2148' => 'pso', 'PSO063G5608' => 'pso', 'PSO210G6392' => 'pso', 'PSO541G2319' => 'pso', 'PSO541G2836' => 'pso', 'PSO541G4012' => 'pso', 'PSO541G6253' => 'pso', 'PSO675G0580' => 'pso', 'PSO675G0856' => 'pso', 'PSO675G5635' => 'pso', 'PSO675G9157' => 'pso', 'PSO832G1660' => 'pso', 'PSO832G1969' => 'pso', 'QL02p007186' => 'qlo', 'QL02p033904' => 'qlo', 'QL03p064391' => 'qlo', 'QL05p040593' => 'qlo', 'QL05p058242' => 'qlo', 'QL08p021825' => 'qlo', 'QL11p004981' => 'qlo', 'RcHm_v2.0_Chr1g0318301' => 'rch', 'RcHm_v2.0_Chr4g0418501' => 'rch', 'RcHm_v2.0_Chr4g0439971' => 'rch', 'RcHm_v2.0_Chr5g0008541' => 'rch', 'RcHm_v2.0_Chr5g0014101' => 'rch', 'RcHm_v2.0_Chr5g0014131' => 'rch', 'RcHm_v2.0_Chr5g0033621' => 'rch', 'RcHm_v2.0_Chr6g0272041' => 'rch', 'RcHm_v2.0_Chr6g0278831' => 'rch', 'Rhsim02G0130400' => 'rsi', 'Rhsim02G0171100' => 'rsi', 'Rhsim05G0053000' => 'rsi', 'Rhsim05G0053100' => 'rsi', 'Rhsim06G0096500' => 'rsi', 'Rhsim06G0096600' => 'rsi', 'Rhsim06G0199100' => 'rsi', 'Rhsim12G0062300' => 'rsi', 'Rhsim12G0062800' => 'rsi', 'Sabra02G0118600' => 'sbr', 'Sabra04G0027300' => 'sbr', 'Sabra04G0119500' => 'sbr', 'Sabra08G0112500' => 'sbr', 'Sabra11G0036800' => 'sbr', 'Sabra11G0103800' => 'sbr', 'Sabra13G0096300' => 'sbr', 'Sabra16G0262300' => 'sbr', 'Sabra18G0091700' => 'sbr', 'Sabra19G0095400' => 'sbr', 'SalBow6G3080' => 'sbo', 'SalBow7G1157' => 'sbo', 'SalBow7G2123' => 'sbo', 'SalBow7G2285' => 'sbo', 'SalBow7G3537' => 'sbo', 'SalBow8G2947' => 'sbo', 'SalBow8G4463' => 'sbo', 'SalBow8G5466' => 'sbo', 'Sc01g0001750' => 'sci', 'Sc02g0006640' => 'sci', 'Sc02g0006670' => 'sci', 'Sc04g0008220' => 'sci', 'Sc05g0006190' => 'sci', 'Sc08g0002760' => 'sci', 'Sc17g0006170' => 'sci', 'Sc22g0002050' => 'sci', 'Sc23g0001190' => 'sci', 'Sc24g0000980' => 'sci', 'Sed0006245' => 'sed', 'Sed0007543' => 'sed', 'Sed0009411' => 'sed', 'Sed0010765' => 'sed', 'Sed0012944' => 'sed', 'Sed0014682' => 'sed', 'Sed0016174' => 'sed', 'Sed0016796' => 'sed', 'Sed0020317' => 'sed', 'Sed0021467' => 'sed', 'SEGI_01316' => 'sgi', 'SEGI_03374' => 'sgi', 'SEGI_16265' => 'sgi', 'SEGI_18569' => 'sgi', 'SEGI_20351' => 'sgi', 'SEGI_26395' => 'sgi', 'SEGI_29469' => 'sgi', 'SEGI_34771' => 'sgi', 'SEGI_36769' => 'sgi', 'SEGI_37139' => 'sgi', 'SGA_v2.0_scaffold100G29687' => 'sas', 'SGA_v2.0_scaffold118G32472' => 'sas', 'SGA_v2.0_scaffold14G07051' => 'sas', 'SGA_v2.0_scaffold183G39845' => 'sas', 'SGA_v2.0_scaffold1G00174' => 'sas', 'SGA_v2.0_scaffold22G09714' => 'sas', 'SGA_v2.0_scaffold333G48992' => 'sas', 'SGA_v2.0_scaffold46G17491' => 'sas', 'SGA_v2.0_scaffold49G18294' => 'sas', 'SGA_v2.0_scaffold63G21658' => 'sas', 'SHI01741' => 'shi', 'SHI05771' => 'shi', 'SHI18077' => 'shi', 'SHI20525' => 'shi', 'SHI20527' => 'shi', 'SHI20528' => 'shi', 'SMO172G0185' => 'smo', 'SMO198G0020' => 'smo', 'SMO351G0006' => 'smo', 'SMO356G0118' => 'smo', 'SMO358G0296' => 'smo', 'SMO367G0079' => 'smo', 'SMO367G1277' => 'smo', 'Solyc01g014220.3' => 'sly', 'Solyc01g111770.2' => 'sly', 'Solyc02g078180.3' => 'sly', 'Solyc03g006430.3' => 'sly', 'Solyc03g006456.1' => 'sly', 'Solyc03g079860.2' => 'sly', 'Solyc04g079770.3' => 'sly', 'Solyc05g007430.4' => 'sly', 'Solyc07g063150.3' => 'sly', 'Solyc08g016620.3' => 'sly', 'Solyc09g057590.3' => 'sly', 'Solyc09g057600.1' => 'sly', 'Solyc10g009050.3' => 'sly', 'Solyc11g017420.2' => 'sly', 'Sopen01g053810' => 'spe', 'Sopen02g023040' => 'spe', 'Sopen03g002440' => 'spe', 'Sopen04g033350' => 'spe', 'Sopen05g003310' => 'spe', 'Sopen07g004050' => 'spe', 'Sopen07g031340' => 'spe', 'Sopen08g006990' => 'spe', 'Sopen10g004830' => 'spe', 'Sopen11g009370' => 'spe', 'Sp1g24450' => 'spa', 'Sp1g29670' => 'spa', 'Sp1g39600' => 'spa', 'Sp2g11080' => 'spa', 'Sp2g13970' => 'spa', 'Sp4g16130' => 'spa', 'Sp6g13080' => 'spa', 'Sp7g37270' => 'spa', 'TAR371G0065' => 'tar', 'TAR376G0340' => 'tar', 'TAR376G0435' => 'tar', 'TAR381G0002' => 'tar', 'TAR381G1236' => 'tar', 'TAR624G0055' => 'tar', 'TAR624G0324' => 'tar', 'TAR624G0696' => 'tar', 'TAR624G0906' => 'tar', 'TAR625G0107' => 'tar', 'TAR626G0015' => 'tar', 'TAR626G1356' => 'tar', 'TAR627G0888' => 'tar', 'TAR628G0399' => 'tar', 'TAR628G1327' => 'tar', 'TAR629G2831' => 'tar', 'TAR629G2874' => 'tar', 'TAR633G1432' => 'tar', 'TAR633G2771' => 'tar', 'THA.LOC104803394' => 'tha', 'THA.LOC104805153' => 'tha', 'THA.LOC104806784' => 'tha', 'THA.LOC104810473' => 'tha', 'THA.LOC104813100' => 'tha', 'THA.LOC104814215' => 'tha', 'THA.LOC104815554' => 'tha', 'THA.LOC104820544' => 'tha', 'THA.LOC104824754' => 'tha', 'THA.LOC104827717' => 'tha', 'Thecc.02G031400' => 'tca', 'Thecc.02G055900' => 'tca', 'Thecc.02G350800' => 'tca', 'Thecc.06G150900' => 'tca', 'Thecc.06G186600' => 'tca', 'Thecc.07G089600' => 'tca', 'Thecc.08G020400' => 'tca', 'Thecc.08G182100' => 'tca', 'Thhalv10000873m.g' => 'esa', 'Thhalv10004185m.g' => 'esa', 'Thhalv10006981m.g' => 'esa', 'Thhalv10007204m.g' => 'esa', 'Thhalv10011374m.g' => 'esa', 'Thhalv10013482m.g' => 'esa', 'Thhalv10017801m.g' => 'esa', 'Thhalv10024983m.g' => 'esa', 'TPR.G12072' => 'tpr', 'TPR.G15769' => 'tpr', 'TPR.G16504' => 'tpr', 'TPR.G16506' => 'tpr', 'TPR.G24345' => 'tpr', 'TPR.G26666' => 'tpr', 'TPR.G27320' => 'tpr', 'TPR.G31819' => 'tpr', 'TPR.G38879' => 'tpr', 'TPR.G39015' => 'tpr', 'TPR.G8819' => 'tpr', 'TWI09G0924' => 'twi', 'TWI12G0811' => 'twi', 'TWI12G1294' => 'twi', 'TWI31G0150' => 'twi', 'TWI36G1262' => 'twi', 'TWI38G1287' => 'twi', 'TWI38G1633' => 'twi', 'TWI38G1982' => 'twi', 'TWI39G0116' => 'twi', 'TWI60G1011' => 'twi', 'TWI63G0171' => 'twi', 'TWI73G0839' => 'twi', 'TWI79G1511' => 'twi', 'unitig_0.g915' => 'ugi', 'unitig_0.g916' => 'ugi', 'unitig_21.g20219' => 'ugi', 'unitig_21.g20416' => 'ugi', 'unitig_578.g16132' => 'ugi', 'unitig_578.g16718' => 'ugi', 'unitig_62.g23481' => 'ugi', 'unitig_744.g24535' => 'ugi', 'unitig_749.g13525' => 'ugi', 'vmacro01248' => 'vma', 'vmacro02290' => 'vma', 'vmacro10946' => 'vma', 'vmacro11865' => 'vma', 'vmacro12493' => 'vma', 'vmacro17322' => 'vma', 'vmacro21599' => 'vma', 'vmacro23041' => 'vma', 'VMungo0251G0004' => 'vmu', 'VMungo0251G2639' => 'vmu', 'VMungo0251G2967' => 'vmu', 'VMungo0540G0864' => 'vmu', 'VMungo0540G1569' => 'vmu', 'VMungo0647G0317' => 'vmu', 'VMungo0720G1373' => 'vmu', 'VMungo0720G1508' => 'vmu', 'VMungo1080G0485' => 'vmu', 'VMungo1215G3177' => 'vmu', 'Zm00001eb112600' => 'zma', 'Zm00001eb120220' => 'zma', 'Zm00001eb153240' => 'zma', 'Zm00001eb168880' => 'zma', 'Zm00001eb213920' => 'zma', 'Zm00001eb228280' => 'zma', 'Zm00001eb254580' => 'zma', 'Zm00001eb272180' => 'zma', 'Zm00001eb293190' => 'zma', 'Zm00001eb322930' => 'zma', 'Zm00001eb353360' => 'zma', 'Zm00001eb353390' => 'zma', 'Zm00001eb353430' => 'zma', 'Zm00001eb353440' => 'zma', 'Zm00001eb353780' => 'zma' ), 'gf_id' => 'HOM05D000499', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000499' ), 'data_identifier' => 'HOM05D000499', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000499', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1066', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p29780' => 'bna', 'A02p33180' => 'bna', 'A03p16470' => 'bna', 'A03p66010' => 'bna', 'A04p25970' => 'bna', 'A06p01270' => 'bna', 'A06p46080' => 'bna', 'A07p11400' => 'bna', 'A08p01840' => 'bna', 'A08p08230' => 'bna', 'A08p25740' => 'bna', 'A09p32070' => 'bna', 'A09p37830' => 'bna', 'A09p42840' => 'bna', 'A09p42850' => 'bna', 'Aa31LG10G2060' => 'aar', 'Aa31LG2G7410' => 'aar', 'Aa31LG6G10200' => 'aar', 'Aa31LG6G16680' => 'aar', 'Aa31LG6G8470' => 'aar', 'Aa31LG9G12730' => 'aar', 'Aa31LG9G13680' => 'aar', 'Aa31LG9G14920' => 'aar', 'Aa31LG9G6650' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4977' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5467' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3254' => 'aag', 'Actinidia02578' => 'ach', 'Actinidia07693' => 'ach', 'Actinidia08413' => 'ach', 'Actinidia08414' => 'ach', 'Actinidia15289' => 'ach', 'Actinidia19871' => 'ach', 'Actinidia21475' => 'ach', 'Actinidia22576' => 'ach', 'Actinidia28327' => 'ach', 'Actinidia32491' => 'ach', 'Actinidia39463' => 'ach', 'Actinidia39571' => 'ach', 'Ah.01g013750' => 'amhyb', 'Ah.01g023210' => 'amhyb', 'Ah.04g164850' => 'amhyb', 'Ah.05g178060' => 'amhyb', 'Ah.07g204270' => 'amhyb', 'Ah.07g208480' => 'amhyb', 'Ah.09g237410' => 'amhyb', 'Ah.14g089460' => 'amhyb', 'AL1G41790' => 'aly', 'AL1G49050' => 'aly', 'AL1G53810' => 'aly', 'AL1G61400' => 'aly', 'AL4G18580' => 'aly', 'AL5G12510' => 'aly', 'AL5G12540' => 'aly', 'AL6G43230' => 'aly', 'AL7G10370' => 'aly', 'AL7G19250' => 'aly', 'AL8G12240' => 'aly', 'AL8G18540' => 'aly', 'Aqoxy1G02409' => 'aox', 'Aqoxy2G03993' => 'aox', 'Aqoxy3G03357' => 'aox', 'Aqoxy4G00785' => 'aox', 'Aqoxy5G02598' => 'aox', 'Aqoxy6G00132' => 'aox', 'Aqoxy7G01776' => 'aox', 'Aqoxy7G02316' => 'aox', 'Aqoxy7G03973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.12AFKW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B8730' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27IQR1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3F75VG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3RE0GA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41TCQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.527VTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FIR39' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5W8UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DA38EV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ63HS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H1I32C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HC27T5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4M8AP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7N3CZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9UVDZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LS1NQA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT1D4B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SKC4TM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCFV76' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF9Q1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQWD9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1ZM88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WE07RT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YCK7VH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJE6Q6' => 'arhy', 'AT1G28240' => 'ath', 'AT1G34550' => 'ath', 'AT1G53040' => 'ath', 'AT2G02910' => 'ath', 'AT4G09630' => 'ath', 'AT4G38500' => 'ath', 'AT5G42660' => 'ath', 'AT5G46220' => 'ath', 'ATR0152G026' => 'atr', 'ATR0564G343' => 'atr', 'ATR0706G151' => 'atr', 'ATR0733G207' => 'atr', 'ATR0751G234' => 'atr', 'ATR0807G048' => 'atr', 'ATR1091G084' => 'atr', 'Atru.chr10.1229' => 'acertr', 'Atru.chr10.1230' => 'acertr', 'Atru.chr10.1874' => 'acertr', 'Atru.chr11.1808' => 'acertr', 'Atru.chr13.1795' => 'acertr', 'Atru.chr13.570' => 'acertr', 'Atru.chr2.2608' => 'acertr', 'Atru.chr2.2609' => 'acertr', 'Atru.chr5.3428' => 'acertr', 'Atru.chr8.1171' => 'acertr', 'AUR62004651' => 'cqu', 'AUR62008675' => 'cqu', 'AUR62010014' => 'cqu', 'AUR62013004' => 'cqu', 'AUR62014825' => 'cqu', 'AUR62015015' => 'cqu', 'AUR62015151' => 'cqu', 'AUR62017020' => 'cqu', 'AUR62019422' => 'cqu', 'AUR62023570' => 'cqu', 'AUR62025571' => 'cqu', 'AUR62029098' => 'cqu', 'AUR62033863' => 'cqu', 'AUR62034296' => 'cqu', 'AUR62040075' => 'cqu', 'BcaB02g07334' => 'bca', 'BcaB02g10575' => 'bca', 'BcaB03g12119' => 'bca', 'BcaB03g12120' => 'bca', 'BcaB03g13945' => 'bca', 'BcaB04g17123' => 'bca', 'BcaB04g17867' => 'bca', 'BcaB04g19839' => 'bca', 'BcaB07g30317' => 'bca', 'BcaB07g32432' => 'bca', 'BcaB07g33362' => 'bca', 'BcaB08g36611' => 'bca', 'BcaC01g00028' => 'bca', 'BcaC01g01356' => 'bca', 'BcaC01g02034' => 'bca', 'BcaC01g06051' => 'bca', 'BcaC03g16839' => 'bca', 'BcaC03g17176' => 'bca', 'BcaC05g26829' => 'bca', 'BcaC06g31490' => 'bca', 'BcaC06g35344' => 'bca', 'BcaC06g36570' => 'bca', 'BcaC07g37537' => 'bca', 'BcaC08g43491' => 'bca', 'BcaC08g43773' => 'bca', 'BcaNung00234' => 'bca', 'BcaNung01982' => 'bca', 'BcaNung03707' => 'bca', 'BcaNung06454' => 'bca', 'BolC2t10762H' => 'bol', 'BolC2t11191H' => 'bol', 'BolC3t14322H' => 'bol', 'BolC3t19747H' => 'bol', 'BolC3t21425H' => 'bol', 'BolC4t27800H' => 'bol', 'BolC5t31423H' => 'bol', 'BolC6t35951H' => 'bol', 'BolC6t36282H' => 'bol', 'BolC7t40678H' => 'bol', 'BolC7t40679H' => 'bol', 'BolC7t42222H' => 'bol', 'BolC7t43492H' => 'bol', 'BolC7t46785H' => 'bol', 'BolC8t47853H' => 'bol', 'BolC9t56805H' => 'bol', 'BraA02t08000Z' => 'bra', 'BraA02t08341Z' => 'bra', 'BraA03t10936Z' => 'bra', 'BraA03t15657Z' => 'bra', 'BraA04t18100Z' => 'bra', 'BraA05t20523Z' => 'bra', 'BraA06t23353Z' => 'bra', 'BraA06t27473Z' => 'bra', 'BraA06t27769Z' => 'bra', 'BraA07t28928Z' => 'bra', 'BraA08t32236Z' => 'bra', 'BraA08t32841Z' => 'bra', 'BraA08t34524Z' => 'bra', 'BraA09t38742Z' => 'bra', 'BraA09t39295Z' => 'bra', 'C02p47180' => 'bna', 'C02p50990' => 'bna', 'C03p19360' => 'bna', 'C03p74950' => 'bna', 'C03p91000' => 'bna', 'C04p63260' => 'bna', 'C05p27050' => 'bna', 'C06p08750' => 'bna', 'C06p11490' => 'bna', 'C07p02820' => 'bna', 'C07p17180' => 'bna', 'C07p29440' => 'bna', 'C07p63730' => 'bna', 'C09p39260' => 'bna', 'CAN.G1164.34' => 'can', 'CAN.G1164.39' => 'can', 'CAN.G1530.3' => 'can', 'CAN.G162.61' => 'can', 'CAN.G176.6' => 'can', 'CAN.G289.49' => 'can', 'CAN.G370.21' => 'can', 'CAN.G370.22' => 'can', 'CAN.G371.117' => 'can', 'CAN.G58.37' => 'can', 'CAN.G588.98' => 'can', 'CANSAT21G2266' => 'cansat', 'CANSAT25G2799' => 'cansat', 'CANSAT35G0862' => 'cansat', 'CANSAT35G1704' => 'cansat', 'CANSAT35G1760' => 'cansat', 'CANSAT56G3971' => 'cansat', 'CANSAT56G4116' => 'cansat', 'CANSAT80G1259' => 'cansat', 'CARHR027730' => 'chi', 'CARHR033880' => 'chi', 'CARHR043270' => 'chi', 'CARHR145330' => 'chi', 'CARHR145340' => 'chi', 'CARHR175570' => 'chi', 'CARHR181570' => 'chi', 'CARHR258470' => 'chi', 'CARHR260490' => 'chi', 'CARHR294220' => 'chi', 'Carub.0001s2668' => 'cru', 'Carub.0001s3257' => 'cru', 'Carub.0001s4220' => 'cru', 'Carub.0005s0179' => 'cru', 'Carub.0006s2807' => 'cru', 'Carub.0007s0039' => 'cru', 'Carub.0008s0169' => 'cru', 'Carub.0008s0636' => 'cru', 'Ca_00338_v3' => 'car', 'Ca_00542_v3' => 'car', 'Ca_01844_v3' => 'car', 'Ca_10611_v3' => 'car', 'Ca_13326_v3' => 'car', 'Ca_17944_v3' => 'car', 'Ca_18546_v3' => 'car', 'Ca_24219_v3' => 'car', 'Ca_29972_v3' => 'car', 'CBR_g3681' => 'cbr', 'CBR_g40021' => 'cbr', 'Cc01_g08140' => 'ccan', 'Cc02_g13410' => 'ccan', 'Cc02_g37480' => 'ccan', 'Cc05_g12030' => 'ccan', 'Cc09_g03370' => 'ccan', 'Cc09_g10300' => 'ccan', 'Cc10_g03530' => 'ccan', 'Cc10_g11380' => 'ccan', 'CDE01G0176' => 'cde', 'CDE02G0675' => 'cde', 'CDE02G0942' => 'cde', 'CDE02G1153' => 'cde', 'CDE02G4177' => 'cde', 'CDE04G2117' => 'cde', 'CDE04G2736' => 'cde', 'CDE08G1161' => 'cde', 'CDE09G1238' => 'cde', 'Cfa000467' => 'cfa', 'Cfa000947' => 'cfa', 'Cfa004969' => 'cfa', 'Cfa005284' => 'cfa', 'Cfa008993' => 'cfa', 'Cfa018187' => 'cfa', 'Cfa018454' => 'cfa', 'Cfa020585' => 'cfa', 'Ciclev10000424m.g' => 'ccl', 'Ciclev10003605m.g' => 'ccl', 'Ciclev10007828m.g' => 'ccl', 'Ciclev10014620m.g' => 'ccl', 'Ciclev10015169m.g' => 'ccl', 'Ciclev10018291m.g' => 'ccl', 'Ciclev10028256m.g' => 'ccl', 'Ciclev10033822m.g' => 'ccl', 'CiPaw.05G060300' => 'cil', 'CiPaw.05G085000' => 'cil', 'CiPaw.06G083700' => 'cil', 'CiPaw.06G120300' => 'cil', 'CiPaw.09G060500' => 'cil', 'CiPaw.09G123800' => 'cil', 'CiPaw.11G169700' => 'cil', 'CiPaw.12G118300' => 'cil', 'CiPaw.15G071000' => 'cil', 'CiPaw.15G081900' => 'cil', 'ClCG01G024610' => 'cla', 'ClCG03G006070' => 'cla', 'ClCG05G019250' => 'cla', 'ClCG09G009500' => 'cla', 'ClCG11G008200' => 'cla', 'ClCG11G018080' => 'cla', 'COL.COLO4_17373' => 'col', 'COL.COLO4_22994' => 'col', 'COL.COLO4_26389' => 'col', 'COL.COLO4_27170' => 'col', 'COL.COLO4_31074' => 'col', 'COL.COLO4_31465' => 'col', 'COL.COLO4_36438' => 'col', 'COL.COLO4_36439' => 'col', 'Cpa.g.c38781' => 'cpa', 'Cpa.g.sc128.12' => 'cpa', 'Cpa.g.sc166.7' => 'cpa', 'Cpa.g.sc166.8' => 'cpa', 'Cpa.g.sc20.111' => 'cpa', 'Cpa.g.sc27.31' => 'cpa', 'Cpa.g.sc64.36' => 'cpa', 'Cpa.g.sc64.37' => 'cpa', 'Cpa.g.sc66.49' => 'cpa', 'Cpa.g.sc80.64' => 'cpa', 'CsaV3_1G012320' => 'csa', 'CsaV3_2G008480' => 'csa', 'CsaV3_2G033450' => 'csa', 'CsaV3_3G044830' => 'csa', 'CsaV3_4G033710' => 'csa', 'CsaV3_6G051730' => 'csa', 'CsaV3_7G025350' => 'csa', 'CSS0001067' => 'camsi', 'CSS0005996' => 'camsi', 'CSS0006590' => 'camsi', 'CSS0009673' => 'camsi', 'CSS0010201' => 'camsi', 'CSS0010549' => 'camsi', 'CSS0011364' => 'camsi', 'CSS0014473' => 'camsi', 'CSS0014961' => 'camsi', 'CSS0020191' => 'camsi', 'CSS0021165' => 'camsi', 'CSS0022306' => 'camsi', 'CSS0030591' => 'camsi', 'CSS0030696' => 'camsi', 'CSS0032653' => 'camsi', 'CSS0037487' => 'camsi', 'CSS0041102' => 'camsi', 'CSS0041261' => 'camsi', 'CSS0046246' => 'camsi', 'CSS0049256' => 'camsi', 'DCAR_004075' => 'dca', 'DCAR_011538' => 'dca', 'DCAR_019553' => 'dca', 'DCAR_020952' => 'dca', 'DCAR_021739' => 'dca', 'DCAR_027407' => 'dca', 'DCAR_027913' => 'dca', 'DCAR_028066' => 'dca', 'Dinv05899' => 'din', 'Dinv07563' => 'din', 'Dinv08010' => 'din', 'Dinv14125' => 'din', 'Dinv20172' => 'din', 'Dinv30743' => 'din', 'Dinv31229' => 'din', 'Dinv34162' => 'din', 'Dinv36028' => 'din', 'Dinv39368' => 'din', 'Dinv40565' => 'din', 'Dinv41706' => 'din', 'Duzib052G0089' => 'dzi', 'Duzib116G0641' => 'dzi', 'Duzib132G0069' => 'dzi', 'Duzib132G1219' => 'dzi', 'Duzib147G0278' => 'dzi', 'Duzib160G0480' => 'dzi', 'Duzib170G0661' => 'dzi', 'Duzib177G0591' => 'dzi', 'Duzib187G1353' => 'dzi', 'Duzib192G0858' => 'dzi', 'Duzib192G0883' => 'dzi', 'Duzib213G0506' => 'dzi', 'Duzib235G0289' => 'dzi', 'Duzib251G0422' => 'dzi', 'ECA232G3898' => 'eca', 'ECA233G5950' => 'eca', 'ECA234G1699' => 'eca', 'ECA234G2421' => 'eca', 'ECA236G0426' => 'eca', 'ECA236G4331' => 'eca', 'ECA248G2573' => 'eca', 'EL10Ac1g00077' => 'bvu', 'EL10Ac1g01746' => 'bvu', 'EL10Ac2g03464' => 'bvu', 'EL10Ac4g08176' => 'bvu', 'EL10Ac7g17521' => 'bvu', 'EL10Ac8g20386' => 'bvu', 'EL10Ac9g21343' => 'bvu', 'EL10Ac9g22688' => 'bvu', 'Eucgr.B03434' => 'egr', 'Eucgr.D00618' => 'egr', 'Eucgr.E02395' => 'egr', 'Eucgr.F01129' => 'egr', 'Eucgr.F02622' => 'egr', 'Eucgr.F04207' => 'egr', 'FAN01G0570' => 'fan', 'FAN03G3351' => 'fan', 'FAN06G3702' => 'fan', 'FAN07G2149' => 'fan', 'FAN10G3758' => 'fan', 'FAN11G1170' => 'fan', 'FAN11G2050' => 'fan', 'FAN11G2724' => 'fan', 'FAN12G1700' => 'fan', 'FAN12G2028' => 'fan', 'FAN15G1160' => 'fan', 'FAN15G3063' => 'fan', 'FAN16G2540' => 'fan', 'FAN16G3077' => 'fan', 'FAN16G3624' => 'fan', 'FAN17G0221' => 'fan', 'FAN20G2492' => 'fan', 'FAN20G2905' => 'fan', 'FAN21G0548' => 'fan', 'FAN21G1300' => 'fan', 'FAN22G0077' => 'fan', 'FAN22G1315' => 'fan', 'FAN24G1280' => 'fan', 'FAN24G1445' => 'fan', 'FAN24G3527' => 'fan', 'FAN25G0464' => 'fan', 'FAN25G2885' => 'fan', 'FAN25G3270' => 'fan', 'FAN27G1101' => 'fan', 'FAN27G2846' => 'fan', 'FAN27G3524' => 'fan', 'FvH4_2g11770' => 'fve', 'FvH4_2g15630' => 'fve', 'FvH4_3g05570' => 'fve', 'FvH4_3g09110' => 'fve', 'FvH4_3g19940' => 'fve', 'FvH4_4g04821' => 'fve', 'FvH4_4g31480' => 'fve', 'FvH4_7g01740' => 'fve', 'Glyma.05G130400' => 'gma', 'Glyma.05G156400' => 'gma', 'Glyma.07G197000' => 'gma', 'Glyma.08G085151' => 'gma', 'Glyma.08G114500' => 'gma', 'Glyma.08G300400' => 'gma', 'Glyma.10G215800' => 'gma', 'Glyma.12G224400' => 'gma', 'Glyma.13G179300' => 'gma', 'Glyma.13G218151' => 'gma', 'Glyma.13G238800' => 'gma', 'Glyma.13G276900' => 'gma', 'Glyma.14G078200' => 'gma', 'Glyma.15G074500' => 'gma', 'Glyma.15G094100' => 'gma', 'Glyma.17G247200' => 'gma', 'Glyma.18G120100' => 'gma', 'Glyma.20G176000' => 'gma', 'Gohir.A01G063600' => 'ghi', 'Gohir.A01G170301' => 'ghi', 'Gohir.A02G060500' => 'ghi', 'Gohir.A05G133850' => 'ghi', 'Gohir.A05G161400' => 'ghi', 'Gohir.A06G012900' => 'ghi', 'Gohir.A06G035901' => 'ghi', 'Gohir.A06G127100' => 'ghi', 'Gohir.A06G210500' => 'ghi', 'Gohir.A08G008650' => 'ghi', 'Gohir.A09G072700' => 'ghi', 'Gohir.A09G088301' => 'ghi', 'Gohir.A10G040600' => 'ghi', 'Gohir.A12G036300' => 'ghi', 'Gohir.A12G143350' => 'ghi', 'Gohir.A12G165500' => 'ghi', 'Gohir.A13G145700' => 'ghi', 'Gohir.D01G050000' => 'ghi', 'Gohir.D01G051366' => 'ghi', 'Gohir.D01G161350' => 'ghi', 'Gohir.D02G065900' => 'ghi', 'Gohir.D05G164200' => 'ghi', 'Gohir.D05G355500' => 'ghi', 'Gohir.D06G010400' => 'ghi', 'Gohir.D06G111250' => 'ghi', 'Gohir.D06G132000' => 'ghi', 'Gohir.D06G210500' => 'ghi', 'Gohir.D07G165675' => 'ghi', 'Gohir.D08G062240' => 'ghi', 'Gohir.D08G086101' => 'ghi', 'Gohir.D08G138060' => 'ghi', 'Gohir.D09G072300' => 'ghi', 'Gohir.D10G041400' => 'ghi', 'Gohir.D11G191020' => 'ghi', 'Gohir.D11G212066' => 'ghi', 'Gohir.D12G036300' => 'ghi', 'Gohir.D12G168600' => 'ghi', 'Gohir.D13G150600' => 'ghi', 'Gorai.001G057300' => 'gra', 'Gorai.002G069900' => 'gra', 'Gorai.002G200000' => 'gra', 'Gorai.003G067600' => 'gra', 'Gorai.005G074800' => 'gra', 'Gorai.006G087300' => 'gra', 'Gorai.008G037500' => 'gra', 'Gorai.008G181400' => 'gra', 'Gorai.009G169400' => 'gra', 'Gorai.009G387900' => 'gra', 'Gorai.010G013300' => 'gra', 'Gorai.010G153800' => 'gra', 'Gorai.010G255800' => 'gra', 'Gorai.011G043700' => 'gra', 'Gorai.011G198900' => 'gra', 'Gorai.013G168400' => 'gra', 'GSVIVG01005212001' => 'vvi', 'GSVIVG01006163001' => 'vvi', 'GSVIVG01009625001' => 'vvi', 'GSVIVG01014338001' => 'vvi', 'GSVIVG01020005001' => 'vvi', 'GSVIVG01021450001' => 'vvi', 'GSVIVG01023975001' => 'vvi', 'GSVIVG01034490001' => 'vvi', 'HanXRQChr04g0112071' => 'han', 'HanXRQChr05g0131151' => 'han', 'HanXRQChr09g0262371' => 'han', 'HanXRQChr09g0268401' => 'han', 'HanXRQChr10g0279241' => 'han', 'HanXRQChr10g0297961' => 'han', 'HanXRQChr11g0326231' => 'han', 'HanXRQChr11g0328471' => 'han', 'HanXRQChr16g0507941' => 'han', 'HanXRQChr17g0560211' => 'han', 'Haze_02108' => 'cav', 'Haze_02428' => 'cav', 'Haze_05593' => 'cav', 'Haze_06448' => 'cav', 'Haze_09427' => 'cav', 'Haze_12022' => 'cav', 'Haze_17612' => 'cav', 'Haze_17928' => 'cav', 'Hma1.2p1_0032F.1_g019250' => 'hma', 'Hma1.2p1_0163F.1_g072690' => 'hma', 'Hma1.2p1_0265F.1_g106710' => 'hma', 'Hma1.2p1_0286F.1_g113970' => 'hma', 'Hma1.2p1_0363F.1_g136640' => 'hma', 'Hma1.2p1_0584F.1_g183470' => 'hma', 'Hma1.2p1_0885F.1_g232570' => 'hma', 'HPP92_006022' => 'vpl', 'HPP92_007320' => 'vpl', 'HPP92_011521' => 'vpl', 'HPP92_019387' => 'vpl', 'HPP92_024038' => 'vpl', 'Hund05891' => 'sun', 'Hund06450' => 'sun', 'Hund12053' => 'sun', 'Hund16800' => 'sun', 'Hund21222' => 'sun', 'Hund22896' => 'sun', 'Hund23746' => 'sun', 'Hund27083' => 'sun', 'Lalb_Chr02g0141831' => 'lal', 'Lalb_Chr02g0141841' => 'lal', 'Lalb_Chr05g0220411' => 'lal', 'Lalb_Chr06g0162081' => 'lal', 'Lalb_Chr09g0327651' => 'lal', 'Lalb_Chr13g0295051' => 'lal', 'Lalb_Chr15g0086801' => 'lal', 'Lalb_Chr16g0383781' => 'lal', 'Lalb_Chr16g0383791' => 'lal', 'Lalb_Chr18g0055441' => 'lal', 'Lalb_Chr18g0059611' => 'lal', 'Lalb_Chr20g0109661' => 'lal', 'Lalb_Chr20g0109831' => 'lal', 'Lalb_Chr20g0121871' => 'lal', 'Lalb_Chr22g0355361' => 'lal', 'Lalb_Chr25g0286371' => 'lal', 'Lj1A1187G43' => 'lonja', 'Lj1A1205T50' => 'lonja', 'Lj1A800G33' => 'lonja', 'Lj1C1187T7' => 'lonja', 'Lj1C843T11' => 'lonja', 'Lj1g0010940' => 'lja', 'Lj2A288T69' => 'lonja', 'Lj3g0024276' => 'lja', 'Lj4A47T76' => 'lonja', 'Lj4g0005805' => 'lja', 'Lj4g0006097' => 'lja', 'Lj4g0008528' => 'lja', 'Lj4g0024907' => 'lja', 'Lj5g0012472' => 'lja', 'Lj5g0018648' => 'lja', 'Lj6C789G1' => 'lonja', 'Lj6g0004000' => 'lja', 'Lj7A292G67' => 'lonja', 'Lj7A292T64' => 'lonja', 'Lj9A400T58' => 'lonja', 'Lsat_1_v5_gn_1_126181' => 'lsa', 'Lsat_1_v5_gn_4_123041' => 'lsa', 'Lsat_1_v5_gn_4_133620' => 'lsa', 'Lsat_1_v5_gn_4_53221' => 'lsa', 'Lsat_1_v5_gn_4_71961' => 'lsa', 'Lsat_1_v5_gn_7_105241' => 'lsa', 'Lsat_1_v5_gn_7_21361' => 'lsa', 'Lsat_1_v5_gn_7_28860' => 'lsa', 'Lsat_1_v5_gn_7_31260' => 'lsa', 'Lsat_1_v5_gn_8_52801' => 'lsa', 'Manes.02G191400' => 'mes', 'Manes.03G110100' => 'mes', 'Manes.04G071100' => 'mes', 'Manes.05G100500' => 'mes', 'Manes.05G164700' => 'mes', 'Manes.15G087000' => 'mes', 'Manes.15G121500' => 'mes', 'Manes.16G028300' => 'mes', 'Manes.17G046100' => 'mes', 'Manes.17G069800' => 'mes', 'Manes.18G100500' => 'mes', 'Mapoly0002s0109' => 'mpo', 'Mapoly0024s0007' => 'mpo', 'Mapoly0089s0032' => 'mpo', 'MBI04_g42241_MAGBIO' => 'mbi', 'MBI05_g11988_MAGBIO' => 'mbi', 'MBI05_g35452_MAGBIO' => 'mbi', 'MBI07_g30179_MAGBIO' => 'mbi', 'MBI07_g35859_MAGBIO' => 'mbi', 'MBI07_g35860_MAGBIO' => 'mbi', 'MBI07_g37166_MAGBIO' => 'mbi', 'MBI08_g18172_MAGBIO' => 'mbi', 'MBI09_g08441_MAGBIO' => 'mbi', 'MBI13_g01676_MAGBIO' => 'mbi', 'MBI14_g42955_MAGBIO' => 'mbi', 'MBI16_g13161_MAGBIO' => 'mbi', 'MBI17_g27204_MAGBIO' => 'mbi', 'MBI19_g21595_MAGBIO' => 'mbi', 'MD00G1148400' => 'mdo', 'MD02G1301200' => 'mdo', 'MD03G1227800' => 'mdo', 'MD05G1041100' => 'mdo', 'MD05G1124800' => 'mdo', 'MD05G1284000' => 'mdo', 'MD05G1338800' => 'mdo', 'MD05G1338900' => 'mdo', 'MD07G1022800' => 'mdo', 'MD10G1047500' => 'mdo', 'MD10G1127500' => 'mdo', 'MD10G1262300' => 'mdo', 'MD10G1293800' => 'mdo', 'MD16G1074300' => 'mdo', 'Medtr1g021670' => 'mtr', 'Medtr1g096320' => 'mtr', 'Medtr2g013690' => 'mtr', 'Medtr2g019450' => 'mtr', 'Medtr2g085170' => 'mtr', 'Medtr4g088785' => 'mtr', 'Medtr8g055930' => 'mtr', 'Medtr8g085850' => 'mtr', 'MELO3C002605.2' => 'cme', 'MELO3C003891.2' => 'cme', 'MELO3C004012.2' => 'cme', 'MELO3C007134.2' => 'cme', 'MELO3C008118.2' => 'cme', 'MELO3C016700.2' => 'cme', 'MELO3C024127.2' => 'cme', 'MELO3C033361.2' => 'cme', 'MELO3C033362.2' => 'cme', 'Migut.C00430' => 'egut', 'Migut.C01246' => 'egut', 'Migut.E00101' => 'egut', 'Migut.H01486' => 'egut', 'Migut.H01939' => 'egut', 'Migut.K00360' => 'egut', 'Migut.M00910' => 'egut', 'Migut.M01139' => 'egut', 'Migut.N02677' => 'egut', 'MSTRG.13252' => 'ama', 'MSTRG.14701' => 'ama', 'MSTRG.1521' => 'ama', 'MSTRG.15884' => 'ama', 'MSTRG.16242' => 'ama', 'MSTRG.22285' => 'ama', 'MSTRG.22444' => 'ama', 'MSTRG.2349' => 'ama', 'MSTRG.26308' => 'ama', 'MSTRG.28296' => 'ama', 'MSTRG.9895' => 'ama', 'Nitab4.5_0000110g0060' => 'nta', 'Nitab4.5_0000420g0130' => 'nta', 'Nitab4.5_0000422g0030' => 'nta', 'Nitab4.5_0000560g0180' => 'nta', 'Nitab4.5_0000703g0100' => 'nta', 'Nitab4.5_0000786g0200' => 'nta', 'Nitab4.5_0001336g0020' => 'nta', 'Nitab4.5_0001796g0030' => 'nta', 'Nitab4.5_0003348g0060' => 'nta', 'Nitab4.5_0003698g0040' => 'nta', 'Nitab4.5_0003942g0090' => 'nta', 'Nitab4.5_0004775g0070' => 'nta', 'Nitab4.5_0004864g0030' => 'nta', 'Nitab4.5_0005615g0020' => 'nta', 'Nitab4.5_0009288g0030' => 'nta', 'Nitab4.5_0009341g0010' => 'nta', 'Nitab4.5_0009535g0010' => 'nta', 'Nn1g03995' => 'nnu', 'Nn1g04100' => 'nnu', 'Nn1g06530' => 'nnu', 'Nn3g16404' => 'nnu', 'Nn3g17212' => 'nnu', 'Nn3g20776' => 'nnu', 'Nn3g21923' => 'nnu', 'Nn5g27737' => 'nnu', 'Nn5g29461' => 'nnu', 'Nn7g38355' => 'nnu', 'Nn8g39873' => 'nnu', 'Oeu000548.2' => 'oeu', 'Oeu004672.1' => 'oeu', 'Oeu015605.2' => 'oeu', 'Oeu016092.1' => 'oeu', 'Oeu017879.3' => 'oeu', 'Oeu024910.1' => 'oeu', 'Oeu028965.1' => 'oeu', 'Oeu031269.1' => 'oeu', 'Oeu031270.1' => 'oeu', 'Oeu032535.1' => 'oeu', 'Oeu034151.1' => 'oeu', 'Oeu034152.1' => 'oeu', 'Oeu034588.2' => 'oeu', 'Oeu050846.1' => 'oeu', 'Oeu050849.2' => 'oeu', 'Oeu051063.2' => 'oeu', 'Oeu052368.1' => 'oeu', 'Oeu052370.1' => 'oeu', 'Os01g0210400' => 'osa', 'Os01g0304300' => 'osa', 'Os01g0749100' => 'osa', 'Os02g0745800' => 'osa', 'Os03g0769050' => 'osa', 'Os05g0531500' => 'osa', 'Os06g0724300' => 'osa', 'Os11g0198100' => 'osa', 'Peaxi162Scf00069g01425' => 'pax', 'Peaxi162Scf00280g00811' => 'pax', 'Peaxi162Scf00310g00615' => 'pax', 'Peaxi162Scf00362g00542' => 'pax', 'Peaxi162Scf00461g00310' => 'pax', 'Peaxi162Scf00530g00118' => 'pax', 'Peaxi162Scf00541g00057' => 'pax', 'Peaxi162Scf00661g00017' => 'pax', 'Peaxi162Scf00926g00027' => 'pax', 'Peaxi162Scf01064g00263' => 'pax', 'Peaxi162Scf01211g00135' => 'pax', 'PGR004G2336' => 'pgr', 'PGR042G0327' => 'pgr', 'PGR042G1957' => 'pgr', 'PGR042G2003' => 'pgr', 'PGR042G3929' => 'pgr', 'PGR083G1137' => 'pgr', 'PGR083G1364' => 'pgr', 'PGSC0003DMG400003381' => 'stu', 'PGSC0003DMG400003417' => 'stu', 'PGSC0003DMG400008981' => 'stu', 'PGSC0003DMG400012417' => 'stu', 'PGSC0003DMG400012823' => 'stu', 'PGSC0003DMG400016885' => 'stu', 'PGSC0003DMG400022812' => 'stu', 'PGSC0003DMG400029726' => 'stu', 'PGSC0003DMG401009243' => 'stu', 'PGSC0003DMG401031505' => 'stu', 'PGSC0003DMG402031505' => 'stu', 'Phvul.001G017600' => 'pvu', 'Phvul.002G193500' => 'pvu', 'Phvul.002G228900' => 'pvu', 'Phvul.002G236800' => 'pvu', 'Phvul.003G049500' => 'pvu', 'Phvul.005G072000' => 'pvu', 'Phvul.006G164800' => 'pvu', 'Phvul.006G185100' => 'pvu', 'Phvul.007G090000' => 'pvu', 'Potri.001G399800' => 'ptr', 'Potri.002G149900' => 'ptr', 'Potri.004G044100' => 'ptr', 'Potri.004G177600' => 'ptr', 'Potri.009G138000' => 'ptr', 'Potri.010G094000' => 'ptr', 'Potri.011G053000' => 'ptr', 'Potri.011G119300' => 'ptr', 'Potri.013G113700' => 'ptr', 'Potri.018G107800' => 'ptr', 'Potri.019G084100' => 'ptr', 'Pp3c14_23720' => 'ppa', 'Pp3c16_6340' => 'ppa', 'Pp3c23_13420' => 'ppa', 'Pp3c24_2740' => 'ppa', 'Pp3c25_860' => 'ppa', 'Pp3c8_21750' => 'ppa', 'Prupe.1G273000' => 'ppe', 'Prupe.1G273700' => 'ppe', 'Prupe.1G274100' => 'ppe', 'Prupe.2G023300' => 'ppe', 'Prupe.4G048000' => 'ppe', 'Prupe.4G080400' => 'ppe', 'Prupe.4G181200' => 'ppe', 'Prupe.8G056900' => 'ppe', 'Prupe.8G168700' => 'ppe', 'Psat1g189080' => 'psa', 'Psat1g204760' => 'psa', 'Psat4g175560' => 'psa', 'Psat4g177720' => 'psa', 'Psat5g244240' => 'psa', 'Psat6g010720' => 'psa', 'Psat6g187200' => 'psa', 'Psat7g072040' => 'psa', 'PSO017G3501' => 'pso', 'PSO063G2148' => 'pso', 'PSO063G5608' => 'pso', 'PSO210G6392' => 'pso', 'PSO541G2319' => 'pso', 'PSO541G2836' => 'pso', 'PSO541G4012' => 'pso', 'PSO541G6253' => 'pso', 'PSO675G0580' => 'pso', 'PSO675G0856' => 'pso', 'PSO675G5635' => 'pso', 'PSO675G9157' => 'pso', 'PSO832G1660' => 'pso', 'PSO832G1969' => 'pso', 'QL02p007186' => 'qlo', 'QL02p033904' => 'qlo', 'QL03p064391' => 'qlo', 'QL05p040593' => 'qlo', 'QL05p058242' => 'qlo', 'QL08p021825' => 'qlo', 'QL11p004981' => 'qlo', 'RcHm_v2.0_Chr1g0318301' => 'rch', 'RcHm_v2.0_Chr4g0418501' => 'rch', 'RcHm_v2.0_Chr4g0439971' => 'rch', 'RcHm_v2.0_Chr5g0008541' => 'rch', 'RcHm_v2.0_Chr5g0014101' => 'rch', 'RcHm_v2.0_Chr5g0014131' => 'rch', 'RcHm_v2.0_Chr5g0033621' => 'rch', 'RcHm_v2.0_Chr6g0272041' => 'rch', 'RcHm_v2.0_Chr6g0278831' => 'rch', 'Rhsim02G0130400' => 'rsi', 'Rhsim02G0171100' => 'rsi', 'Rhsim05G0053000' => 'rsi', 'Rhsim05G0053100' => 'rsi', 'Rhsim06G0096500' => 'rsi', 'Rhsim06G0096600' => 'rsi', 'Rhsim06G0199100' => 'rsi', 'Rhsim12G0062300' => 'rsi', 'Rhsim12G0062800' => 'rsi', 'Sabra02G0118600' => 'sbr', 'Sabra04G0027300' => 'sbr', 'Sabra04G0119500' => 'sbr', 'Sabra08G0112500' => 'sbr', 'Sabra11G0036800' => 'sbr', 'Sabra11G0103800' => 'sbr', 'Sabra13G0096300' => 'sbr', 'Sabra16G0262300' => 'sbr', 'Sabra18G0091700' => 'sbr', 'Sabra19G0095400' => 'sbr', 'SalBow6G3080' => 'sbo', 'SalBow7G1157' => 'sbo', 'SalBow7G2123' => 'sbo', 'SalBow7G2285' => 'sbo', 'SalBow7G3537' => 'sbo', 'SalBow8G2947' => 'sbo', 'SalBow8G4463' => 'sbo', 'SalBow8G5466' => 'sbo', 'Sc01g0001750' => 'sci', 'Sc02g0006640' => 'sci', 'Sc02g0006670' => 'sci', 'Sc04g0008220' => 'sci', 'Sc05g0006190' => 'sci', 'Sc08g0002760' => 'sci', 'Sc17g0006170' => 'sci', 'Sc22g0002050' => 'sci', 'Sc23g0001190' => 'sci', 'Sc24g0000980' => 'sci', 'Sed0006245' => 'sed', 'Sed0007543' => 'sed', 'Sed0009411' => 'sed', 'Sed0010765' => 'sed', 'Sed0012944' => 'sed', 'Sed0014682' => 'sed', 'Sed0016174' => 'sed', 'Sed0016796' => 'sed', 'Sed0020317' => 'sed', 'Sed0021467' => 'sed', 'SEGI_01316' => 'sgi', 'SEGI_03374' => 'sgi', 'SEGI_16265' => 'sgi', 'SEGI_18569' => 'sgi', 'SEGI_20351' => 'sgi', 'SEGI_26395' => 'sgi', 'SEGI_29469' => 'sgi', 'SEGI_34771' => 'sgi', 'SEGI_36769' => 'sgi', 'SEGI_37139' => 'sgi', 'SGA_v2.0_scaffold100G29687' => 'sas', 'SGA_v2.0_scaffold118G32472' => 'sas', 'SGA_v2.0_scaffold14G07051' => 'sas', 'SGA_v2.0_scaffold183G39845' => 'sas', 'SGA_v2.0_scaffold1G00174' => 'sas', 'SGA_v2.0_scaffold22G09714' => 'sas', 'SGA_v2.0_scaffold333G48992' => 'sas', 'SGA_v2.0_scaffold46G17491' => 'sas', 'SGA_v2.0_scaffold49G18294' => 'sas', 'SGA_v2.0_scaffold63G21658' => 'sas', 'SHI01741' => 'shi', 'SHI05771' => 'shi', 'SHI18077' => 'shi', 'SHI20525' => 'shi', 'SHI20527' => 'shi', 'SHI20528' => 'shi', 'SMO172G0185' => 'smo', 'SMO198G0020' => 'smo', 'SMO351G0006' => 'smo', 'SMO356G0118' => 'smo', 'SMO358G0296' => 'smo', 'SMO367G0079' => 'smo', 'SMO367G1277' => 'smo', 'Solyc01g014220.3' => 'sly', 'Solyc01g111770.2' => 'sly', 'Solyc02g078180.3' => 'sly', 'Solyc03g006430.3' => 'sly', 'Solyc03g006456.1' => 'sly', 'Solyc03g079860.2' => 'sly', 'Solyc04g079770.3' => 'sly', 'Solyc05g007430.4' => 'sly', 'Solyc07g063150.3' => 'sly', 'Solyc08g016620.3' => 'sly', 'Solyc09g057590.3' => 'sly', 'Solyc09g057600.1' => 'sly', 'Solyc10g009050.3' => 'sly', 'Solyc11g017420.2' => 'sly', 'Sopen01g053810' => 'spe', 'Sopen02g023040' => 'spe', 'Sopen03g002440' => 'spe', 'Sopen04g033350' => 'spe', 'Sopen05g003310' => 'spe', 'Sopen07g004050' => 'spe', 'Sopen07g031340' => 'spe', 'Sopen08g006990' => 'spe', 'Sopen10g004830' => 'spe', 'Sopen11g009370' => 'spe', 'Sp1g24450' => 'spa', 'Sp1g29670' => 'spa', 'Sp1g39600' => 'spa', 'Sp2g11080' => 'spa', 'Sp2g13970' => 'spa', 'Sp4g16130' => 'spa', 'Sp6g13080' => 'spa', 'Sp7g37270' => 'spa', 'TAR371G0065' => 'tar', 'TAR376G0340' => 'tar', 'TAR376G0435' => 'tar', 'TAR381G0002' => 'tar', 'TAR381G1236' => 'tar', 'TAR624G0055' => 'tar', 'TAR624G0324' => 'tar', 'TAR624G0696' => 'tar', 'TAR624G0906' => 'tar', 'TAR625G0107' => 'tar', 'TAR626G0015' => 'tar', 'TAR626G1356' => 'tar', 'TAR627G0888' => 'tar', 'TAR628G0399' => 'tar', 'TAR628G1327' => 'tar', 'TAR629G2831' => 'tar', 'TAR629G2874' => 'tar', 'TAR633G1432' => 'tar', 'TAR633G2771' => 'tar', 'THA.LOC104803394' => 'tha', 'THA.LOC104805153' => 'tha', 'THA.LOC104806784' => 'tha', 'THA.LOC104810473' => 'tha', 'THA.LOC104813100' => 'tha', 'THA.LOC104814215' => 'tha', 'THA.LOC104815554' => 'tha', 'THA.LOC104820544' => 'tha', 'THA.LOC104824754' => 'tha', 'THA.LOC104827717' => 'tha', 'Thecc.02G031400' => 'tca', 'Thecc.02G055900' => 'tca', 'Thecc.02G350800' => 'tca', 'Thecc.06G150900' => 'tca', 'Thecc.06G186600' => 'tca', 'Thecc.07G089600' => 'tca', 'Thecc.08G020400' => 'tca', 'Thecc.08G182100' => 'tca', 'Thhalv10000873m.g' => 'esa', 'Thhalv10004185m.g' => 'esa', 'Thhalv10006981m.g' => 'esa', 'Thhalv10007204m.g' => 'esa', 'Thhalv10011374m.g' => 'esa', 'Thhalv10013482m.g' => 'esa', 'Thhalv10017801m.g' => 'esa', 'Thhalv10024983m.g' => 'esa', 'TPR.G12072' => 'tpr', 'TPR.G15769' => 'tpr', 'TPR.G16504' => 'tpr', 'TPR.G16506' => 'tpr', 'TPR.G24345' => 'tpr', 'TPR.G26666' => 'tpr', 'TPR.G27320' => 'tpr', 'TPR.G31819' => 'tpr', 'TPR.G38879' => 'tpr', 'TPR.G39015' => 'tpr', 'TPR.G8819' => 'tpr', 'TWI09G0924' => 'twi', 'TWI12G0811' => 'twi', 'TWI12G1294' => 'twi', 'TWI31G0150' => 'twi', 'TWI36G1262' => 'twi', 'TWI38G1287' => 'twi', 'TWI38G1633' => 'twi', 'TWI38G1982' => 'twi', 'TWI39G0116' => 'twi', 'TWI60G1011' => 'twi', 'TWI63G0171' => 'twi', 'TWI73G0839' => 'twi', 'TWI79G1511' => 'twi', 'unitig_0.g915' => 'ugi', 'unitig_0.g916' => 'ugi', 'unitig_21.g20219' => 'ugi', 'unitig_21.g20416' => 'ugi', 'unitig_578.g16132' => 'ugi', 'unitig_578.g16718' => 'ugi', 'unitig_62.g23481' => 'ugi', 'unitig_744.g24535' => 'ugi', 'unitig_749.g13525' => 'ugi', 'vmacro01248' => 'vma', 'vmacro02290' => 'vma', 'vmacro10946' => 'vma', 'vmacro11865' => 'vma', 'vmacro12493' => 'vma', 'vmacro17322' => 'vma', 'vmacro21599' => 'vma', 'vmacro23041' => 'vma', 'VMungo0251G0004' => 'vmu', 'VMungo0251G2639' => 'vmu', 'VMungo0251G2967' => 'vmu', 'VMungo0540G0864' => 'vmu', 'VMungo0540G1569' => 'vmu', 'VMungo0647G0317' => 'vmu', 'VMungo0720G1373' => 'vmu', 'VMungo0720G1508' => 'vmu', 'VMungo1080G0485' => 'vmu', 'VMungo1215G3177' => 'vmu', 'Zm00001eb112600' => 'zma', 'Zm00001eb120220' => 'zma', 'Zm00001eb153240' => 'zma', 'Zm00001eb168880' => 'zma', 'Zm00001eb213920' => 'zma', 'Zm00001eb228280' => 'zma', 'Zm00001eb254580' => 'zma', 'Zm00001eb272180' => 'zma', 'Zm00001eb293190' => 'zma', 'Zm00001eb322930' => 'zma', 'Zm00001eb353360' => 'zma', 'Zm00001eb353390' => 'zma', 'Zm00001eb353430' => 'zma', 'Zm00001eb353440' => 'zma', 'Zm00001eb353780' => 'zma' ) $gf_id = 'HOM05D000499' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000499' ) $data_identifier = 'HOM05D000499' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 29, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 12, 'amhyb' => (int) 8, 'aly' => (int) 12, 'aox' => (int) 9, 'arhy' => (int) 26, 'ath' => (int) 8, 'atr' => (int) 7, 'acertr' => (int) 10, 'cqu' => (int) 15, 'bca' => (int) 29, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 11, 'cansat' => (int) 8, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 9, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 8, 'cpa' => (int) 10, 'csa' => (int) 7, 'camsi' => (int) 20, 'dca' => (int) 8, 'din' => (int) 12, 'dzi' => (int) 14, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 6, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 38, 'gra' => (int) 16, 'vvi' => (int) 8, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 5, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 11, 'lja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 11, 'mpo' => (int) 3, 'mbi' => (int) 14, 'mdo' => (int) 14, 'mtr' => (int) 8, 'cme' => (int) 9, 'egut' => (int) 9, 'ama' => (int) 11, 'nta' => (int) 17, 'nnu' => (int) 11, 'oeu' => (int) 18, 'osa' => (int) 8, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 6, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 9, 'rsi' => (int) 9, 'sbr' => (int) 10, 'sbo' => (int) 8, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 10, 'sas' => (int) 10, 'shi' => (int) 6, 'smo' => (int) 7, 'sly' => (int) 14, 'spe' => (int) 10, 'spa' => (int) 8, 'tar' => (int) 19, 'tha' => (int) 10, 'tca' => (int) 8, 'esa' => (int) 8, 'tpr' => (int) 11, 'twi' => (int) 13, 'ugi' => (int) 9, 'vma' => (int) 8, 'vmu' => (int) 10, 'zma' => (int) 15 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb353780' $species_info = array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ) $local_species = 'car' $disabled = '' $selected = '' $num_hits = (int) 0include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000499', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1066', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p29780' => 'bna', 'A02p33180' => 'bna', 'A03p16470' => 'bna', 'A03p66010' => 'bna', 'A04p25970' => 'bna', 'A06p01270' => 'bna', 'A06p46080' => 'bna', 'A07p11400' => 'bna', 'A08p01840' => 'bna', 'A08p08230' => 'bna', 'A08p25740' => 'bna', 'A09p32070' => 'bna', 'A09p37830' => 'bna', 'A09p42840' => 'bna', 'A09p42850' => 'bna', 'Aa31LG10G2060' => 'aar', 'Aa31LG2G7410' => 'aar', 'Aa31LG6G10200' => 'aar', 'Aa31LG6G16680' => 'aar', 'Aa31LG6G8470' => 'aar', 'Aa31LG9G12730' => 'aar', 'Aa31LG9G13680' => 'aar', 'Aa31LG9G14920' => 'aar', 'Aa31LG9G6650' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4977' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5467' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3254' => 'aag', 'Actinidia02578' => 'ach', 'Actinidia07693' => 'ach', 'Actinidia08413' => 'ach', 'Actinidia08414' => 'ach', 'Actinidia15289' => 'ach', 'Actinidia19871' => 'ach', 'Actinidia21475' => 'ach', 'Actinidia22576' => 'ach', 'Actinidia28327' => 'ach', 'Actinidia32491' => 'ach', 'Actinidia39463' => 'ach', 'Actinidia39571' => 'ach', 'Ah.01g013750' => 'amhyb', 'Ah.01g023210' => 'amhyb', 'Ah.04g164850' => 'amhyb', 'Ah.05g178060' => 'amhyb', 'Ah.07g204270' => 'amhyb', 'Ah.07g208480' => 'amhyb', 'Ah.09g237410' => 'amhyb', 'Ah.14g089460' => 'amhyb', 'AL1G41790' => 'aly', 'AL1G49050' => 'aly', 'AL1G53810' => 'aly', 'AL1G61400' => 'aly', 'AL4G18580' => 'aly', 'AL5G12510' => 'aly', 'AL5G12540' => 'aly', 'AL6G43230' => 'aly', 'AL7G10370' => 'aly', 'AL7G19250' => 'aly', 'AL8G12240' => 'aly', 'AL8G18540' => 'aly', 'Aqoxy1G02409' => 'aox', 'Aqoxy2G03993' => 'aox', 'Aqoxy3G03357' => 'aox', 'Aqoxy4G00785' => 'aox', 'Aqoxy5G02598' => 'aox', 'Aqoxy6G00132' => 'aox', 'Aqoxy7G01776' => 'aox', 'Aqoxy7G02316' => 'aox', 'Aqoxy7G03973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.12AFKW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B8730' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27IQR1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3F75VG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3RE0GA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41TCQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.527VTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FIR39' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5W8UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DA38EV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ63HS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H1I32C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HC27T5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4M8AP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7N3CZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9UVDZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LS1NQA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT1D4B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SKC4TM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCFV76' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF9Q1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQWD9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1ZM88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WE07RT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YCK7VH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJE6Q6' => 'arhy', 'AT1G28240' => 'ath', 'AT1G34550' => 'ath', 'AT1G53040' => 'ath', 'AT2G02910' => 'ath', 'AT4G09630' => 'ath', 'AT4G38500' => 'ath', 'AT5G42660' => 'ath', 'AT5G46220' => 'ath', 'ATR0152G026' => 'atr', 'ATR0564G343' => 'atr', 'ATR0706G151' => 'atr', 'ATR0733G207' => 'atr', 'ATR0751G234' => 'atr', 'ATR0807G048' => 'atr', 'ATR1091G084' => 'atr', 'Atru.chr10.1229' => 'acertr', 'Atru.chr10.1230' => 'acertr', 'Atru.chr10.1874' => 'acertr', 'Atru.chr11.1808' => 'acertr', 'Atru.chr13.1795' => 'acertr', 'Atru.chr13.570' => 'acertr', 'Atru.chr2.2608' => 'acertr', 'Atru.chr2.2609' => 'acertr', 'Atru.chr5.3428' => 'acertr', 'Atru.chr8.1171' => 'acertr', 'AUR62004651' => 'cqu', 'AUR62008675' => 'cqu', 'AUR62010014' => 'cqu', 'AUR62013004' => 'cqu', 'AUR62014825' => 'cqu', 'AUR62015015' => 'cqu', 'AUR62015151' => 'cqu', 'AUR62017020' => 'cqu', 'AUR62019422' => 'cqu', 'AUR62023570' => 'cqu', 'AUR62025571' => 'cqu', 'AUR62029098' => 'cqu', 'AUR62033863' => 'cqu', 'AUR62034296' => 'cqu', 'AUR62040075' => 'cqu', 'BcaB02g07334' => 'bca', 'BcaB02g10575' => 'bca', 'BcaB03g12119' => 'bca', 'BcaB03g12120' => 'bca', 'BcaB03g13945' => 'bca', 'BcaB04g17123' => 'bca', 'BcaB04g17867' => 'bca', 'BcaB04g19839' => 'bca', 'BcaB07g30317' => 'bca', 'BcaB07g32432' => 'bca', 'BcaB07g33362' => 'bca', 'BcaB08g36611' => 'bca', 'BcaC01g00028' => 'bca', 'BcaC01g01356' => 'bca', 'BcaC01g02034' => 'bca', 'BcaC01g06051' => 'bca', 'BcaC03g16839' => 'bca', 'BcaC03g17176' => 'bca', 'BcaC05g26829' => 'bca', 'BcaC06g31490' => 'bca', 'BcaC06g35344' => 'bca', 'BcaC06g36570' => 'bca', 'BcaC07g37537' => 'bca', 'BcaC08g43491' => 'bca', 'BcaC08g43773' => 'bca', 'BcaNung00234' => 'bca', 'BcaNung01982' => 'bca', 'BcaNung03707' => 'bca', 'BcaNung06454' => 'bca', 'BolC2t10762H' => 'bol', 'BolC2t11191H' => 'bol', 'BolC3t14322H' => 'bol', 'BolC3t19747H' => 'bol', 'BolC3t21425H' => 'bol', 'BolC4t27800H' => 'bol', 'BolC5t31423H' => 'bol', 'BolC6t35951H' => 'bol', 'BolC6t36282H' => 'bol', 'BolC7t40678H' => 'bol', 'BolC7t40679H' => 'bol', 'BolC7t42222H' => 'bol', 'BolC7t43492H' => 'bol', 'BolC7t46785H' => 'bol', 'BolC8t47853H' => 'bol', 'BolC9t56805H' => 'bol', 'BraA02t08000Z' => 'bra', 'BraA02t08341Z' => 'bra', 'BraA03t10936Z' => 'bra', 'BraA03t15657Z' => 'bra', 'BraA04t18100Z' => 'bra', 'BraA05t20523Z' => 'bra', 'BraA06t23353Z' => 'bra', 'BraA06t27473Z' => 'bra', 'BraA06t27769Z' => 'bra', 'BraA07t28928Z' => 'bra', 'BraA08t32236Z' => 'bra', 'BraA08t32841Z' => 'bra', 'BraA08t34524Z' => 'bra', 'BraA09t38742Z' => 'bra', 'BraA09t39295Z' => 'bra', 'C02p47180' => 'bna', 'C02p50990' => 'bna', 'C03p19360' => 'bna', 'C03p74950' => 'bna', 'C03p91000' => 'bna', 'C04p63260' => 'bna', 'C05p27050' => 'bna', 'C06p08750' => 'bna', 'C06p11490' => 'bna', 'C07p02820' => 'bna', 'C07p17180' => 'bna', 'C07p29440' => 'bna', 'C07p63730' => 'bna', 'C09p39260' => 'bna', 'CAN.G1164.34' => 'can', 'CAN.G1164.39' => 'can', 'CAN.G1530.3' => 'can', 'CAN.G162.61' => 'can', 'CAN.G176.6' => 'can', 'CAN.G289.49' => 'can', 'CAN.G370.21' => 'can', 'CAN.G370.22' => 'can', 'CAN.G371.117' => 'can', 'CAN.G58.37' => 'can', 'CAN.G588.98' => 'can', 'CANSAT21G2266' => 'cansat', 'CANSAT25G2799' => 'cansat', 'CANSAT35G0862' => 'cansat', 'CANSAT35G1704' => 'cansat', 'CANSAT35G1760' => 'cansat', 'CANSAT56G3971' => 'cansat', 'CANSAT56G4116' => 'cansat', 'CANSAT80G1259' => 'cansat', 'CARHR027730' => 'chi', 'CARHR033880' => 'chi', 'CARHR043270' => 'chi', 'CARHR145330' => 'chi', 'CARHR145340' => 'chi', 'CARHR175570' => 'chi', 'CARHR181570' => 'chi', 'CARHR258470' => 'chi', 'CARHR260490' => 'chi', 'CARHR294220' => 'chi', 'Carub.0001s2668' => 'cru', 'Carub.0001s3257' => 'cru', 'Carub.0001s4220' => 'cru', 'Carub.0005s0179' => 'cru', 'Carub.0006s2807' => 'cru', 'Carub.0007s0039' => 'cru', 'Carub.0008s0169' => 'cru', 'Carub.0008s0636' => 'cru', 'Ca_00338_v3' => 'car', 'Ca_00542_v3' => 'car', 'Ca_01844_v3' => 'car', 'Ca_10611_v3' => 'car', 'Ca_13326_v3' => 'car', 'Ca_17944_v3' => 'car', 'Ca_18546_v3' => 'car', 'Ca_24219_v3' => 'car', 'Ca_29972_v3' => 'car', 'CBR_g3681' => 'cbr', 'CBR_g40021' => 'cbr', 'Cc01_g08140' => 'ccan', 'Cc02_g13410' => 'ccan', 'Cc02_g37480' => 'ccan', 'Cc05_g12030' => 'ccan', 'Cc09_g03370' => 'ccan', 'Cc09_g10300' => 'ccan', 'Cc10_g03530' => 'ccan', 'Cc10_g11380' => 'ccan', 'CDE01G0176' => 'cde', 'CDE02G0675' => 'cde', 'CDE02G0942' => 'cde', 'CDE02G1153' => 'cde', 'CDE02G4177' => 'cde', 'CDE04G2117' => 'cde', 'CDE04G2736' => 'cde', 'CDE08G1161' => 'cde', 'CDE09G1238' => 'cde', 'Cfa000467' => 'cfa', 'Cfa000947' => 'cfa', 'Cfa004969' => 'cfa', 'Cfa005284' => 'cfa', 'Cfa008993' => 'cfa', 'Cfa018187' => 'cfa', 'Cfa018454' => 'cfa', 'Cfa020585' => 'cfa', 'Ciclev10000424m.g' => 'ccl', 'Ciclev10003605m.g' => 'ccl', 'Ciclev10007828m.g' => 'ccl', 'Ciclev10014620m.g' => 'ccl', 'Ciclev10015169m.g' => 'ccl', 'Ciclev10018291m.g' => 'ccl', 'Ciclev10028256m.g' => 'ccl', 'Ciclev10033822m.g' => 'ccl', 'CiPaw.05G060300' => 'cil', 'CiPaw.05G085000' => 'cil', 'CiPaw.06G083700' => 'cil', 'CiPaw.06G120300' => 'cil', 'CiPaw.09G060500' => 'cil', 'CiPaw.09G123800' => 'cil', 'CiPaw.11G169700' => 'cil', 'CiPaw.12G118300' => 'cil', 'CiPaw.15G071000' => 'cil', 'CiPaw.15G081900' => 'cil', 'ClCG01G024610' => 'cla', 'ClCG03G006070' => 'cla', 'ClCG05G019250' => 'cla', 'ClCG09G009500' => 'cla', 'ClCG11G008200' => 'cla', 'ClCG11G018080' => 'cla', 'COL.COLO4_17373' => 'col', 'COL.COLO4_22994' => 'col', 'COL.COLO4_26389' => 'col', 'COL.COLO4_27170' => 'col', 'COL.COLO4_31074' => 'col', 'COL.COLO4_31465' => 'col', 'COL.COLO4_36438' => 'col', 'COL.COLO4_36439' => 'col', 'Cpa.g.c38781' => 'cpa', 'Cpa.g.sc128.12' => 'cpa', 'Cpa.g.sc166.7' => 'cpa', 'Cpa.g.sc166.8' => 'cpa', 'Cpa.g.sc20.111' => 'cpa', 'Cpa.g.sc27.31' => 'cpa', 'Cpa.g.sc64.36' => 'cpa', 'Cpa.g.sc64.37' => 'cpa', 'Cpa.g.sc66.49' => 'cpa', 'Cpa.g.sc80.64' => 'cpa', 'CsaV3_1G012320' => 'csa', 'CsaV3_2G008480' => 'csa', 'CsaV3_2G033450' => 'csa', 'CsaV3_3G044830' => 'csa', 'CsaV3_4G033710' => 'csa', 'CsaV3_6G051730' => 'csa', 'CsaV3_7G025350' => 'csa', 'CSS0001067' => 'camsi', 'CSS0005996' => 'camsi', 'CSS0006590' => 'camsi', 'CSS0009673' => 'camsi', 'CSS0010201' => 'camsi', 'CSS0010549' => 'camsi', 'CSS0011364' => 'camsi', 'CSS0014473' => 'camsi', 'CSS0014961' => 'camsi', 'CSS0020191' => 'camsi', 'CSS0021165' => 'camsi', 'CSS0022306' => 'camsi', 'CSS0030591' => 'camsi', 'CSS0030696' => 'camsi', 'CSS0032653' => 'camsi', 'CSS0037487' => 'camsi', 'CSS0041102' => 'camsi', 'CSS0041261' => 'camsi', 'CSS0046246' => 'camsi', 'CSS0049256' => 'camsi', 'DCAR_004075' => 'dca', 'DCAR_011538' => 'dca', 'DCAR_019553' => 'dca', 'DCAR_020952' => 'dca', 'DCAR_021739' => 'dca', 'DCAR_027407' => 'dca', 'DCAR_027913' => 'dca', 'DCAR_028066' => 'dca', 'Dinv05899' => 'din', 'Dinv07563' => 'din', 'Dinv08010' => 'din', 'Dinv14125' => 'din', 'Dinv20172' => 'din', 'Dinv30743' => 'din', 'Dinv31229' => 'din', 'Dinv34162' => 'din', 'Dinv36028' => 'din', 'Dinv39368' => 'din', 'Dinv40565' => 'din', 'Dinv41706' => 'din', 'Duzib052G0089' => 'dzi', 'Duzib116G0641' => 'dzi', 'Duzib132G0069' => 'dzi', 'Duzib132G1219' => 'dzi', 'Duzib147G0278' => 'dzi', 'Duzib160G0480' => 'dzi', 'Duzib170G0661' => 'dzi', 'Duzib177G0591' => 'dzi', 'Duzib187G1353' => 'dzi', 'Duzib192G0858' => 'dzi', 'Duzib192G0883' => 'dzi', 'Duzib213G0506' => 'dzi', 'Duzib235G0289' => 'dzi', 'Duzib251G0422' => 'dzi', 'ECA232G3898' => 'eca', 'ECA233G5950' => 'eca', 'ECA234G1699' => 'eca', 'ECA234G2421' => 'eca', 'ECA236G0426' => 'eca', 'ECA236G4331' => 'eca', 'ECA248G2573' => 'eca', 'EL10Ac1g00077' => 'bvu', 'EL10Ac1g01746' => 'bvu', 'EL10Ac2g03464' => 'bvu', 'EL10Ac4g08176' => 'bvu', 'EL10Ac7g17521' => 'bvu', 'EL10Ac8g20386' => 'bvu', 'EL10Ac9g21343' => 'bvu', 'EL10Ac9g22688' => 'bvu', 'Eucgr.B03434' => 'egr', 'Eucgr.D00618' => 'egr', 'Eucgr.E02395' => 'egr', 'Eucgr.F01129' => 'egr', 'Eucgr.F02622' => 'egr', 'Eucgr.F04207' => 'egr', 'FAN01G0570' => 'fan', 'FAN03G3351' => 'fan', 'FAN06G3702' => 'fan', 'FAN07G2149' => 'fan', 'FAN10G3758' => 'fan', 'FAN11G1170' => 'fan', 'FAN11G2050' => 'fan', 'FAN11G2724' => 'fan', 'FAN12G1700' => 'fan', 'FAN12G2028' => 'fan', 'FAN15G1160' => 'fan', 'FAN15G3063' => 'fan', 'FAN16G2540' => 'fan', 'FAN16G3077' => 'fan', 'FAN16G3624' => 'fan', 'FAN17G0221' => 'fan', 'FAN20G2492' => 'fan', 'FAN20G2905' => 'fan', 'FAN21G0548' => 'fan', 'FAN21G1300' => 'fan', 'FAN22G0077' => 'fan', 'FAN22G1315' => 'fan', 'FAN24G1280' => 'fan', 'FAN24G1445' => 'fan', 'FAN24G3527' => 'fan', 'FAN25G0464' => 'fan', 'FAN25G2885' => 'fan', 'FAN25G3270' => 'fan', 'FAN27G1101' => 'fan', 'FAN27G2846' => 'fan', 'FAN27G3524' => 'fan', 'FvH4_2g11770' => 'fve', 'FvH4_2g15630' => 'fve', 'FvH4_3g05570' => 'fve', 'FvH4_3g09110' => 'fve', 'FvH4_3g19940' => 'fve', 'FvH4_4g04821' => 'fve', 'FvH4_4g31480' => 'fve', 'FvH4_7g01740' => 'fve', 'Glyma.05G130400' => 'gma', 'Glyma.05G156400' => 'gma', 'Glyma.07G197000' => 'gma', 'Glyma.08G085151' => 'gma', 'Glyma.08G114500' => 'gma', 'Glyma.08G300400' => 'gma', 'Glyma.10G215800' => 'gma', 'Glyma.12G224400' => 'gma', 'Glyma.13G179300' => 'gma', 'Glyma.13G218151' => 'gma', 'Glyma.13G238800' => 'gma', 'Glyma.13G276900' => 'gma', 'Glyma.14G078200' => 'gma', 'Glyma.15G074500' => 'gma', 'Glyma.15G094100' => 'gma', 'Glyma.17G247200' => 'gma', 'Glyma.18G120100' => 'gma', 'Glyma.20G176000' => 'gma', 'Gohir.A01G063600' => 'ghi', 'Gohir.A01G170301' => 'ghi', 'Gohir.A02G060500' => 'ghi', 'Gohir.A05G133850' => 'ghi', 'Gohir.A05G161400' => 'ghi', 'Gohir.A06G012900' => 'ghi', 'Gohir.A06G035901' => 'ghi', 'Gohir.A06G127100' => 'ghi', 'Gohir.A06G210500' => 'ghi', 'Gohir.A08G008650' => 'ghi', 'Gohir.A09G072700' => 'ghi', 'Gohir.A09G088301' => 'ghi', 'Gohir.A10G040600' => 'ghi', 'Gohir.A12G036300' => 'ghi', 'Gohir.A12G143350' => 'ghi', 'Gohir.A12G165500' => 'ghi', 'Gohir.A13G145700' => 'ghi', 'Gohir.D01G050000' => 'ghi', 'Gohir.D01G051366' => 'ghi', 'Gohir.D01G161350' => 'ghi', 'Gohir.D02G065900' => 'ghi', 'Gohir.D05G164200' => 'ghi', 'Gohir.D05G355500' => 'ghi', 'Gohir.D06G010400' => 'ghi', 'Gohir.D06G111250' => 'ghi', 'Gohir.D06G132000' => 'ghi', 'Gohir.D06G210500' => 'ghi', 'Gohir.D07G165675' => 'ghi', 'Gohir.D08G062240' => 'ghi', 'Gohir.D08G086101' => 'ghi', 'Gohir.D08G138060' => 'ghi', 'Gohir.D09G072300' => 'ghi', 'Gohir.D10G041400' => 'ghi', 'Gohir.D11G191020' => 'ghi', 'Gohir.D11G212066' => 'ghi', 'Gohir.D12G036300' => 'ghi', 'Gohir.D12G168600' => 'ghi', 'Gohir.D13G150600' => 'ghi', 'Gorai.001G057300' => 'gra', 'Gorai.002G069900' => 'gra', 'Gorai.002G200000' => 'gra', 'Gorai.003G067600' => 'gra', 'Gorai.005G074800' => 'gra', 'Gorai.006G087300' => 'gra', 'Gorai.008G037500' => 'gra', 'Gorai.008G181400' => 'gra', 'Gorai.009G169400' => 'gra', 'Gorai.009G387900' => 'gra', 'Gorai.010G013300' => 'gra', 'Gorai.010G153800' => 'gra', 'Gorai.010G255800' => 'gra', 'Gorai.011G043700' => 'gra', 'Gorai.011G198900' => 'gra', 'Gorai.013G168400' => 'gra', 'GSVIVG01005212001' => 'vvi', 'GSVIVG01006163001' => 'vvi', 'GSVIVG01009625001' => 'vvi', 'GSVIVG01014338001' => 'vvi', 'GSVIVG01020005001' => 'vvi', 'GSVIVG01021450001' => 'vvi', 'GSVIVG01023975001' => 'vvi', 'GSVIVG01034490001' => 'vvi', 'HanXRQChr04g0112071' => 'han', 'HanXRQChr05g0131151' => 'han', 'HanXRQChr09g0262371' => 'han', 'HanXRQChr09g0268401' => 'han', 'HanXRQChr10g0279241' => 'han', 'HanXRQChr10g0297961' => 'han', 'HanXRQChr11g0326231' => 'han', 'HanXRQChr11g0328471' => 'han', 'HanXRQChr16g0507941' => 'han', 'HanXRQChr17g0560211' => 'han', 'Haze_02108' => 'cav', 'Haze_02428' => 'cav', 'Haze_05593' => 'cav', 'Haze_06448' => 'cav', 'Haze_09427' => 'cav', 'Haze_12022' => 'cav', 'Haze_17612' => 'cav', 'Haze_17928' => 'cav', 'Hma1.2p1_0032F.1_g019250' => 'hma', 'Hma1.2p1_0163F.1_g072690' => 'hma', 'Hma1.2p1_0265F.1_g106710' => 'hma', 'Hma1.2p1_0286F.1_g113970' => 'hma', 'Hma1.2p1_0363F.1_g136640' => 'hma', 'Hma1.2p1_0584F.1_g183470' => 'hma', 'Hma1.2p1_0885F.1_g232570' => 'hma', 'HPP92_006022' => 'vpl', 'HPP92_007320' => 'vpl', 'HPP92_011521' => 'vpl', 'HPP92_019387' => 'vpl', 'HPP92_024038' => 'vpl', 'Hund05891' => 'sun', 'Hund06450' => 'sun', 'Hund12053' => 'sun', 'Hund16800' => 'sun', 'Hund21222' => 'sun', 'Hund22896' => 'sun', 'Hund23746' => 'sun', 'Hund27083' => 'sun', 'Lalb_Chr02g0141831' => 'lal', 'Lalb_Chr02g0141841' => 'lal', 'Lalb_Chr05g0220411' => 'lal', 'Lalb_Chr06g0162081' => 'lal', 'Lalb_Chr09g0327651' => 'lal', 'Lalb_Chr13g0295051' => 'lal', 'Lalb_Chr15g0086801' => 'lal', 'Lalb_Chr16g0383781' => 'lal', 'Lalb_Chr16g0383791' => 'lal', 'Lalb_Chr18g0055441' => 'lal', 'Lalb_Chr18g0059611' => 'lal', 'Lalb_Chr20g0109661' => 'lal', 'Lalb_Chr20g0109831' => 'lal', 'Lalb_Chr20g0121871' => 'lal', 'Lalb_Chr22g0355361' => 'lal', 'Lalb_Chr25g0286371' => 'lal', 'Lj1A1187G43' => 'lonja', 'Lj1A1205T50' => 'lonja', 'Lj1A800G33' => 'lonja', 'Lj1C1187T7' => 'lonja', 'Lj1C843T11' => 'lonja', 'Lj1g0010940' => 'lja', 'Lj2A288T69' => 'lonja', 'Lj3g0024276' => 'lja', 'Lj4A47T76' => 'lonja', 'Lj4g0005805' => 'lja', 'Lj4g0006097' => 'lja', 'Lj4g0008528' => 'lja', 'Lj4g0024907' => 'lja', 'Lj5g0012472' => 'lja', 'Lj5g0018648' => 'lja', 'Lj6C789G1' => 'lonja', 'Lj6g0004000' => 'lja', 'Lj7A292G67' => 'lonja', 'Lj7A292T64' => 'lonja', 'Lj9A400T58' => 'lonja', 'Lsat_1_v5_gn_1_126181' => 'lsa', 'Lsat_1_v5_gn_4_123041' => 'lsa', 'Lsat_1_v5_gn_4_133620' => 'lsa', 'Lsat_1_v5_gn_4_53221' => 'lsa', 'Lsat_1_v5_gn_4_71961' => 'lsa', 'Lsat_1_v5_gn_7_105241' => 'lsa', 'Lsat_1_v5_gn_7_21361' => 'lsa', 'Lsat_1_v5_gn_7_28860' => 'lsa', 'Lsat_1_v5_gn_7_31260' => 'lsa', 'Lsat_1_v5_gn_8_52801' => 'lsa', 'Manes.02G191400' => 'mes', 'Manes.03G110100' => 'mes', 'Manes.04G071100' => 'mes', 'Manes.05G100500' => 'mes', 'Manes.05G164700' => 'mes', 'Manes.15G087000' => 'mes', 'Manes.15G121500' => 'mes', 'Manes.16G028300' => 'mes', 'Manes.17G046100' => 'mes', 'Manes.17G069800' => 'mes', 'Manes.18G100500' => 'mes', 'Mapoly0002s0109' => 'mpo', 'Mapoly0024s0007' => 'mpo', 'Mapoly0089s0032' => 'mpo', 'MBI04_g42241_MAGBIO' => 'mbi', 'MBI05_g11988_MAGBIO' => 'mbi', 'MBI05_g35452_MAGBIO' => 'mbi', 'MBI07_g30179_MAGBIO' => 'mbi', 'MBI07_g35859_MAGBIO' => 'mbi', 'MBI07_g35860_MAGBIO' => 'mbi', 'MBI07_g37166_MAGBIO' => 'mbi', 'MBI08_g18172_MAGBIO' => 'mbi', 'MBI09_g08441_MAGBIO' => 'mbi', 'MBI13_g01676_MAGBIO' => 'mbi', 'MBI14_g42955_MAGBIO' => 'mbi', 'MBI16_g13161_MAGBIO' => 'mbi', 'MBI17_g27204_MAGBIO' => 'mbi', 'MBI19_g21595_MAGBIO' => 'mbi', 'MD00G1148400' => 'mdo', 'MD02G1301200' => 'mdo', 'MD03G1227800' => 'mdo', 'MD05G1041100' => 'mdo', 'MD05G1124800' => 'mdo', 'MD05G1284000' => 'mdo', 'MD05G1338800' => 'mdo', 'MD05G1338900' => 'mdo', 'MD07G1022800' => 'mdo', 'MD10G1047500' => 'mdo', 'MD10G1127500' => 'mdo', 'MD10G1262300' => 'mdo', 'MD10G1293800' => 'mdo', 'MD16G1074300' => 'mdo', 'Medtr1g021670' => 'mtr', 'Medtr1g096320' => 'mtr', 'Medtr2g013690' => 'mtr', 'Medtr2g019450' => 'mtr', 'Medtr2g085170' => 'mtr', 'Medtr4g088785' => 'mtr', 'Medtr8g055930' => 'mtr', 'Medtr8g085850' => 'mtr', 'MELO3C002605.2' => 'cme', 'MELO3C003891.2' => 'cme', 'MELO3C004012.2' => 'cme', 'MELO3C007134.2' => 'cme', 'MELO3C008118.2' => 'cme', 'MELO3C016700.2' => 'cme', 'MELO3C024127.2' => 'cme', 'MELO3C033361.2' => 'cme', 'MELO3C033362.2' => 'cme', 'Migut.C00430' => 'egut', 'Migut.C01246' => 'egut', 'Migut.E00101' => 'egut', 'Migut.H01486' => 'egut', 'Migut.H01939' => 'egut', 'Migut.K00360' => 'egut', 'Migut.M00910' => 'egut', 'Migut.M01139' => 'egut', 'Migut.N02677' => 'egut', 'MSTRG.13252' => 'ama', 'MSTRG.14701' => 'ama', 'MSTRG.1521' => 'ama', 'MSTRG.15884' => 'ama', 'MSTRG.16242' => 'ama', 'MSTRG.22285' => 'ama', 'MSTRG.22444' => 'ama', 'MSTRG.2349' => 'ama', 'MSTRG.26308' => 'ama', 'MSTRG.28296' => 'ama', 'MSTRG.9895' => 'ama', 'Nitab4.5_0000110g0060' => 'nta', 'Nitab4.5_0000420g0130' => 'nta', 'Nitab4.5_0000422g0030' => 'nta', 'Nitab4.5_0000560g0180' => 'nta', 'Nitab4.5_0000703g0100' => 'nta', 'Nitab4.5_0000786g0200' => 'nta', 'Nitab4.5_0001336g0020' => 'nta', 'Nitab4.5_0001796g0030' => 'nta', 'Nitab4.5_0003348g0060' => 'nta', 'Nitab4.5_0003698g0040' => 'nta', 'Nitab4.5_0003942g0090' => 'nta', 'Nitab4.5_0004775g0070' => 'nta', 'Nitab4.5_0004864g0030' => 'nta', 'Nitab4.5_0005615g0020' => 'nta', 'Nitab4.5_0009288g0030' => 'nta', 'Nitab4.5_0009341g0010' => 'nta', 'Nitab4.5_0009535g0010' => 'nta', 'Nn1g03995' => 'nnu', 'Nn1g04100' => 'nnu', 'Nn1g06530' => 'nnu', 'Nn3g16404' => 'nnu', 'Nn3g17212' => 'nnu', 'Nn3g20776' => 'nnu', 'Nn3g21923' => 'nnu', 'Nn5g27737' => 'nnu', 'Nn5g29461' => 'nnu', 'Nn7g38355' => 'nnu', 'Nn8g39873' => 'nnu', 'Oeu000548.2' => 'oeu', 'Oeu004672.1' => 'oeu', 'Oeu015605.2' => 'oeu', 'Oeu016092.1' => 'oeu', 'Oeu017879.3' => 'oeu', 'Oeu024910.1' => 'oeu', 'Oeu028965.1' => 'oeu', 'Oeu031269.1' => 'oeu', 'Oeu031270.1' => 'oeu', 'Oeu032535.1' => 'oeu', 'Oeu034151.1' => 'oeu', 'Oeu034152.1' => 'oeu', 'Oeu034588.2' => 'oeu', 'Oeu050846.1' => 'oeu', 'Oeu050849.2' => 'oeu', 'Oeu051063.2' => 'oeu', 'Oeu052368.1' => 'oeu', 'Oeu052370.1' => 'oeu', 'Os01g0210400' => 'osa', 'Os01g0304300' => 'osa', 'Os01g0749100' => 'osa', 'Os02g0745800' => 'osa', 'Os03g0769050' => 'osa', 'Os05g0531500' => 'osa', 'Os06g0724300' => 'osa', 'Os11g0198100' => 'osa', 'Peaxi162Scf00069g01425' => 'pax', 'Peaxi162Scf00280g00811' => 'pax', 'Peaxi162Scf00310g00615' => 'pax', 'Peaxi162Scf00362g00542' => 'pax', 'Peaxi162Scf00461g00310' => 'pax', 'Peaxi162Scf00530g00118' => 'pax', 'Peaxi162Scf00541g00057' => 'pax', 'Peaxi162Scf00661g00017' => 'pax', 'Peaxi162Scf00926g00027' => 'pax', 'Peaxi162Scf01064g00263' => 'pax', 'Peaxi162Scf01211g00135' => 'pax', 'PGR004G2336' => 'pgr', 'PGR042G0327' => 'pgr', 'PGR042G1957' => 'pgr', 'PGR042G2003' => 'pgr', 'PGR042G3929' => 'pgr', 'PGR083G1137' => 'pgr', 'PGR083G1364' => 'pgr', 'PGSC0003DMG400003381' => 'stu', 'PGSC0003DMG400003417' => 'stu', 'PGSC0003DMG400008981' => 'stu', 'PGSC0003DMG400012417' => 'stu', 'PGSC0003DMG400012823' => 'stu', 'PGSC0003DMG400016885' => 'stu', 'PGSC0003DMG400022812' => 'stu', 'PGSC0003DMG400029726' => 'stu', 'PGSC0003DMG401009243' => 'stu', 'PGSC0003DMG401031505' => 'stu', 'PGSC0003DMG402031505' => 'stu', 'Phvul.001G017600' => 'pvu', 'Phvul.002G193500' => 'pvu', 'Phvul.002G228900' => 'pvu', 'Phvul.002G236800' => 'pvu', 'Phvul.003G049500' => 'pvu', 'Phvul.005G072000' => 'pvu', 'Phvul.006G164800' => 'pvu', 'Phvul.006G185100' => 'pvu', 'Phvul.007G090000' => 'pvu', 'Potri.001G399800' => 'ptr', 'Potri.002G149900' => 'ptr', 'Potri.004G044100' => 'ptr', 'Potri.004G177600' => 'ptr', 'Potri.009G138000' => 'ptr', 'Potri.010G094000' => 'ptr', 'Potri.011G053000' => 'ptr', 'Potri.011G119300' => 'ptr', 'Potri.013G113700' => 'ptr', 'Potri.018G107800' => 'ptr', 'Potri.019G084100' => 'ptr', 'Pp3c14_23720' => 'ppa', 'Pp3c16_6340' => 'ppa', 'Pp3c23_13420' => 'ppa', 'Pp3c24_2740' => 'ppa', 'Pp3c25_860' => 'ppa', 'Pp3c8_21750' => 'ppa', 'Prupe.1G273000' => 'ppe', 'Prupe.1G273700' => 'ppe', 'Prupe.1G274100' => 'ppe', 'Prupe.2G023300' => 'ppe', 'Prupe.4G048000' => 'ppe', 'Prupe.4G080400' => 'ppe', 'Prupe.4G181200' => 'ppe', 'Prupe.8G056900' => 'ppe', 'Prupe.8G168700' => 'ppe', 'Psat1g189080' => 'psa', 'Psat1g204760' => 'psa', 'Psat4g175560' => 'psa', 'Psat4g177720' => 'psa', 'Psat5g244240' => 'psa', 'Psat6g010720' => 'psa', 'Psat6g187200' => 'psa', 'Psat7g072040' => 'psa', 'PSO017G3501' => 'pso', 'PSO063G2148' => 'pso', 'PSO063G5608' => 'pso', 'PSO210G6392' => 'pso', 'PSO541G2319' => 'pso', 'PSO541G2836' => 'pso', 'PSO541G4012' => 'pso', 'PSO541G6253' => 'pso', 'PSO675G0580' => 'pso', 'PSO675G0856' => 'pso', 'PSO675G5635' => 'pso', 'PSO675G9157' => 'pso', 'PSO832G1660' => 'pso', 'PSO832G1969' => 'pso', 'QL02p007186' => 'qlo', 'QL02p033904' => 'qlo', 'QL03p064391' => 'qlo', 'QL05p040593' => 'qlo', 'QL05p058242' => 'qlo', 'QL08p021825' => 'qlo', 'QL11p004981' => 'qlo', 'RcHm_v2.0_Chr1g0318301' => 'rch', 'RcHm_v2.0_Chr4g0418501' => 'rch', 'RcHm_v2.0_Chr4g0439971' => 'rch', 'RcHm_v2.0_Chr5g0008541' => 'rch', 'RcHm_v2.0_Chr5g0014101' => 'rch', 'RcHm_v2.0_Chr5g0014131' => 'rch', 'RcHm_v2.0_Chr5g0033621' => 'rch', 'RcHm_v2.0_Chr6g0272041' => 'rch', 'RcHm_v2.0_Chr6g0278831' => 'rch', 'Rhsim02G0130400' => 'rsi', 'Rhsim02G0171100' => 'rsi', 'Rhsim05G0053000' => 'rsi', 'Rhsim05G0053100' => 'rsi', 'Rhsim06G0096500' => 'rsi', 'Rhsim06G0096600' => 'rsi', 'Rhsim06G0199100' => 'rsi', 'Rhsim12G0062300' => 'rsi', 'Rhsim12G0062800' => 'rsi', 'Sabra02G0118600' => 'sbr', 'Sabra04G0027300' => 'sbr', 'Sabra04G0119500' => 'sbr', 'Sabra08G0112500' => 'sbr', 'Sabra11G0036800' => 'sbr', 'Sabra11G0103800' => 'sbr', 'Sabra13G0096300' => 'sbr', 'Sabra16G0262300' => 'sbr', 'Sabra18G0091700' => 'sbr', 'Sabra19G0095400' => 'sbr', 'SalBow6G3080' => 'sbo', 'SalBow7G1157' => 'sbo', 'SalBow7G2123' => 'sbo', 'SalBow7G2285' => 'sbo', 'SalBow7G3537' => 'sbo', 'SalBow8G2947' => 'sbo', 'SalBow8G4463' => 'sbo', 'SalBow8G5466' => 'sbo', 'Sc01g0001750' => 'sci', 'Sc02g0006640' => 'sci', 'Sc02g0006670' => 'sci', 'Sc04g0008220' => 'sci', 'Sc05g0006190' => 'sci', 'Sc08g0002760' => 'sci', 'Sc17g0006170' => 'sci', 'Sc22g0002050' => 'sci', 'Sc23g0001190' => 'sci', 'Sc24g0000980' => 'sci', 'Sed0006245' => 'sed', 'Sed0007543' => 'sed', 'Sed0009411' => 'sed', 'Sed0010765' => 'sed', 'Sed0012944' => 'sed', 'Sed0014682' => 'sed', 'Sed0016174' => 'sed', 'Sed0016796' => 'sed', 'Sed0020317' => 'sed', 'Sed0021467' => 'sed', 'SEGI_01316' => 'sgi', 'SEGI_03374' => 'sgi', 'SEGI_16265' => 'sgi', 'SEGI_18569' => 'sgi', 'SEGI_20351' => 'sgi', 'SEGI_26395' => 'sgi', 'SEGI_29469' => 'sgi', 'SEGI_34771' => 'sgi', 'SEGI_36769' => 'sgi', 'SEGI_37139' => 'sgi', 'SGA_v2.0_scaffold100G29687' => 'sas', 'SGA_v2.0_scaffold118G32472' => 'sas', 'SGA_v2.0_scaffold14G07051' => 'sas', 'SGA_v2.0_scaffold183G39845' => 'sas', 'SGA_v2.0_scaffold1G00174' => 'sas', 'SGA_v2.0_scaffold22G09714' => 'sas', 'SGA_v2.0_scaffold333G48992' => 'sas', 'SGA_v2.0_scaffold46G17491' => 'sas', 'SGA_v2.0_scaffold49G18294' => 'sas', 'SGA_v2.0_scaffold63G21658' => 'sas', 'SHI01741' => 'shi', 'SHI05771' => 'shi', 'SHI18077' => 'shi', 'SHI20525' => 'shi', 'SHI20527' => 'shi', 'SHI20528' => 'shi', 'SMO172G0185' => 'smo', 'SMO198G0020' => 'smo', 'SMO351G0006' => 'smo', 'SMO356G0118' => 'smo', 'SMO358G0296' => 'smo', 'SMO367G0079' => 'smo', 'SMO367G1277' => 'smo', 'Solyc01g014220.3' => 'sly', 'Solyc01g111770.2' => 'sly', 'Solyc02g078180.3' => 'sly', 'Solyc03g006430.3' => 'sly', 'Solyc03g006456.1' => 'sly', 'Solyc03g079860.2' => 'sly', 'Solyc04g079770.3' => 'sly', 'Solyc05g007430.4' => 'sly', 'Solyc07g063150.3' => 'sly', 'Solyc08g016620.3' => 'sly', 'Solyc09g057590.3' => 'sly', 'Solyc09g057600.1' => 'sly', 'Solyc10g009050.3' => 'sly', 'Solyc11g017420.2' => 'sly', 'Sopen01g053810' => 'spe', 'Sopen02g023040' => 'spe', 'Sopen03g002440' => 'spe', 'Sopen04g033350' => 'spe', 'Sopen05g003310' => 'spe', 'Sopen07g004050' => 'spe', 'Sopen07g031340' => 'spe', 'Sopen08g006990' => 'spe', 'Sopen10g004830' => 'spe', 'Sopen11g009370' => 'spe', 'Sp1g24450' => 'spa', 'Sp1g29670' => 'spa', 'Sp1g39600' => 'spa', 'Sp2g11080' => 'spa', 'Sp2g13970' => 'spa', 'Sp4g16130' => 'spa', 'Sp6g13080' => 'spa', 'Sp7g37270' => 'spa', 'TAR371G0065' => 'tar', 'TAR376G0340' => 'tar', 'TAR376G0435' => 'tar', 'TAR381G0002' => 'tar', 'TAR381G1236' => 'tar', 'TAR624G0055' => 'tar', 'TAR624G0324' => 'tar', 'TAR624G0696' => 'tar', 'TAR624G0906' => 'tar', 'TAR625G0107' => 'tar', 'TAR626G0015' => 'tar', 'TAR626G1356' => 'tar', 'TAR627G0888' => 'tar', 'TAR628G0399' => 'tar', 'TAR628G1327' => 'tar', 'TAR629G2831' => 'tar', 'TAR629G2874' => 'tar', 'TAR633G1432' => 'tar', 'TAR633G2771' => 'tar', 'THA.LOC104803394' => 'tha', 'THA.LOC104805153' => 'tha', 'THA.LOC104806784' => 'tha', 'THA.LOC104810473' => 'tha', 'THA.LOC104813100' => 'tha', 'THA.LOC104814215' => 'tha', 'THA.LOC104815554' => 'tha', 'THA.LOC104820544' => 'tha', 'THA.LOC104824754' => 'tha', 'THA.LOC104827717' => 'tha', 'Thecc.02G031400' => 'tca', 'Thecc.02G055900' => 'tca', 'Thecc.02G350800' => 'tca', 'Thecc.06G150900' => 'tca', 'Thecc.06G186600' => 'tca', 'Thecc.07G089600' => 'tca', 'Thecc.08G020400' => 'tca', 'Thecc.08G182100' => 'tca', 'Thhalv10000873m.g' => 'esa', 'Thhalv10004185m.g' => 'esa', 'Thhalv10006981m.g' => 'esa', 'Thhalv10007204m.g' => 'esa', 'Thhalv10011374m.g' => 'esa', 'Thhalv10013482m.g' => 'esa', 'Thhalv10017801m.g' => 'esa', 'Thhalv10024983m.g' => 'esa', 'TPR.G12072' => 'tpr', 'TPR.G15769' => 'tpr', 'TPR.G16504' => 'tpr', 'TPR.G16506' => 'tpr', 'TPR.G24345' => 'tpr', 'TPR.G26666' => 'tpr', 'TPR.G27320' => 'tpr', 'TPR.G31819' => 'tpr', 'TPR.G38879' => 'tpr', 'TPR.G39015' => 'tpr', 'TPR.G8819' => 'tpr', 'TWI09G0924' => 'twi', 'TWI12G0811' => 'twi', 'TWI12G1294' => 'twi', 'TWI31G0150' => 'twi', 'TWI36G1262' => 'twi', 'TWI38G1287' => 'twi', 'TWI38G1633' => 'twi', 'TWI38G1982' => 'twi', 'TWI39G0116' => 'twi', 'TWI60G1011' => 'twi', 'TWI63G0171' => 'twi', 'TWI73G0839' => 'twi', 'TWI79G1511' => 'twi', 'unitig_0.g915' => 'ugi', 'unitig_0.g916' => 'ugi', 'unitig_21.g20219' => 'ugi', 'unitig_21.g20416' => 'ugi', 'unitig_578.g16132' => 'ugi', 'unitig_578.g16718' => 'ugi', 'unitig_62.g23481' => 'ugi', 'unitig_744.g24535' => 'ugi', 'unitig_749.g13525' => 'ugi', 'vmacro01248' => 'vma', 'vmacro02290' => 'vma', 'vmacro10946' => 'vma', 'vmacro11865' => 'vma', 'vmacro12493' => 'vma', 'vmacro17322' => 'vma', 'vmacro21599' => 'vma', 'vmacro23041' => 'vma', 'VMungo0251G0004' => 'vmu', 'VMungo0251G2639' => 'vmu', 'VMungo0251G2967' => 'vmu', 'VMungo0540G0864' => 'vmu', 'VMungo0540G1569' => 'vmu', 'VMungo0647G0317' => 'vmu', 'VMungo0720G1373' => 'vmu', 'VMungo0720G1508' => 'vmu', 'VMungo1080G0485' => 'vmu', 'VMungo1215G3177' => 'vmu', 'Zm00001eb112600' => 'zma', 'Zm00001eb120220' => 'zma', 'Zm00001eb153240' => 'zma', 'Zm00001eb168880' => 'zma', 'Zm00001eb213920' => 'zma', 'Zm00001eb228280' => 'zma', 'Zm00001eb254580' => 'zma', 'Zm00001eb272180' => 'zma', 'Zm00001eb293190' => 'zma', 'Zm00001eb322930' => 'zma', 'Zm00001eb353360' => 'zma', 'Zm00001eb353390' => 'zma', 'Zm00001eb353430' => 'zma', 'Zm00001eb353440' => 'zma', 'Zm00001eb353780' => 'zma' ), 'gf_id' => 'HOM05D000499', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000499' ), 'data_identifier' => 'HOM05D000499', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000499', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1066', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p29780' => 'bna', 'A02p33180' => 'bna', 'A03p16470' => 'bna', 'A03p66010' => 'bna', 'A04p25970' => 'bna', 'A06p01270' => 'bna', 'A06p46080' => 'bna', 'A07p11400' => 'bna', 'A08p01840' => 'bna', 'A08p08230' => 'bna', 'A08p25740' => 'bna', 'A09p32070' => 'bna', 'A09p37830' => 'bna', 'A09p42840' => 'bna', 'A09p42850' => 'bna', 'Aa31LG10G2060' => 'aar', 'Aa31LG2G7410' => 'aar', 'Aa31LG6G10200' => 'aar', 'Aa31LG6G16680' => 'aar', 'Aa31LG6G8470' => 'aar', 'Aa31LG9G12730' => 'aar', 'Aa31LG9G13680' => 'aar', 'Aa31LG9G14920' => 'aar', 'Aa31LG9G6650' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4977' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5467' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3254' => 'aag', 'Actinidia02578' => 'ach', 'Actinidia07693' => 'ach', 'Actinidia08413' => 'ach', 'Actinidia08414' => 'ach', 'Actinidia15289' => 'ach', 'Actinidia19871' => 'ach', 'Actinidia21475' => 'ach', 'Actinidia22576' => 'ach', 'Actinidia28327' => 'ach', 'Actinidia32491' => 'ach', 'Actinidia39463' => 'ach', 'Actinidia39571' => 'ach', 'Ah.01g013750' => 'amhyb', 'Ah.01g023210' => 'amhyb', 'Ah.04g164850' => 'amhyb', 'Ah.05g178060' => 'amhyb', 'Ah.07g204270' => 'amhyb', 'Ah.07g208480' => 'amhyb', 'Ah.09g237410' => 'amhyb', 'Ah.14g089460' => 'amhyb', 'AL1G41790' => 'aly', 'AL1G49050' => 'aly', 'AL1G53810' => 'aly', 'AL1G61400' => 'aly', 'AL4G18580' => 'aly', 'AL5G12510' => 'aly', 'AL5G12540' => 'aly', 'AL6G43230' => 'aly', 'AL7G10370' => 'aly', 'AL7G19250' => 'aly', 'AL8G12240' => 'aly', 'AL8G18540' => 'aly', 'Aqoxy1G02409' => 'aox', 'Aqoxy2G03993' => 'aox', 'Aqoxy3G03357' => 'aox', 'Aqoxy4G00785' => 'aox', 'Aqoxy5G02598' => 'aox', 'Aqoxy6G00132' => 'aox', 'Aqoxy7G01776' => 'aox', 'Aqoxy7G02316' => 'aox', 'Aqoxy7G03973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.12AFKW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B8730' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27IQR1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3F75VG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3RE0GA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41TCQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.527VTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FIR39' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5W8UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DA38EV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ63HS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H1I32C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HC27T5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4M8AP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7N3CZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9UVDZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LS1NQA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT1D4B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SKC4TM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCFV76' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF9Q1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQWD9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1ZM88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WE07RT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YCK7VH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJE6Q6' => 'arhy', 'AT1G28240' => 'ath', 'AT1G34550' => 'ath', 'AT1G53040' => 'ath', 'AT2G02910' => 'ath', 'AT4G09630' => 'ath', 'AT4G38500' => 'ath', 'AT5G42660' => 'ath', 'AT5G46220' => 'ath', 'ATR0152G026' => 'atr', 'ATR0564G343' => 'atr', 'ATR0706G151' => 'atr', 'ATR0733G207' => 'atr', 'ATR0751G234' => 'atr', 'ATR0807G048' => 'atr', 'ATR1091G084' => 'atr', 'Atru.chr10.1229' => 'acertr', 'Atru.chr10.1230' => 'acertr', 'Atru.chr10.1874' => 'acertr', 'Atru.chr11.1808' => 'acertr', 'Atru.chr13.1795' => 'acertr', 'Atru.chr13.570' => 'acertr', 'Atru.chr2.2608' => 'acertr', 'Atru.chr2.2609' => 'acertr', 'Atru.chr5.3428' => 'acertr', 'Atru.chr8.1171' => 'acertr', 'AUR62004651' => 'cqu', 'AUR62008675' => 'cqu', 'AUR62010014' => 'cqu', 'AUR62013004' => 'cqu', 'AUR62014825' => 'cqu', 'AUR62015015' => 'cqu', 'AUR62015151' => 'cqu', 'AUR62017020' => 'cqu', 'AUR62019422' => 'cqu', 'AUR62023570' => 'cqu', 'AUR62025571' => 'cqu', 'AUR62029098' => 'cqu', 'AUR62033863' => 'cqu', 'AUR62034296' => 'cqu', 'AUR62040075' => 'cqu', 'BcaB02g07334' => 'bca', 'BcaB02g10575' => 'bca', 'BcaB03g12119' => 'bca', 'BcaB03g12120' => 'bca', 'BcaB03g13945' => 'bca', 'BcaB04g17123' => 'bca', 'BcaB04g17867' => 'bca', 'BcaB04g19839' => 'bca', 'BcaB07g30317' => 'bca', 'BcaB07g32432' => 'bca', 'BcaB07g33362' => 'bca', 'BcaB08g36611' => 'bca', 'BcaC01g00028' => 'bca', 'BcaC01g01356' => 'bca', 'BcaC01g02034' => 'bca', 'BcaC01g06051' => 'bca', 'BcaC03g16839' => 'bca', 'BcaC03g17176' => 'bca', 'BcaC05g26829' => 'bca', 'BcaC06g31490' => 'bca', 'BcaC06g35344' => 'bca', 'BcaC06g36570' => 'bca', 'BcaC07g37537' => 'bca', 'BcaC08g43491' => 'bca', 'BcaC08g43773' => 'bca', 'BcaNung00234' => 'bca', 'BcaNung01982' => 'bca', 'BcaNung03707' => 'bca', 'BcaNung06454' => 'bca', 'BolC2t10762H' => 'bol', 'BolC2t11191H' => 'bol', 'BolC3t14322H' => 'bol', 'BolC3t19747H' => 'bol', 'BolC3t21425H' => 'bol', 'BolC4t27800H' => 'bol', 'BolC5t31423H' => 'bol', 'BolC6t35951H' => 'bol', 'BolC6t36282H' => 'bol', 'BolC7t40678H' => 'bol', 'BolC7t40679H' => 'bol', 'BolC7t42222H' => 'bol', 'BolC7t43492H' => 'bol', 'BolC7t46785H' => 'bol', 'BolC8t47853H' => 'bol', 'BolC9t56805H' => 'bol', 'BraA02t08000Z' => 'bra', 'BraA02t08341Z' => 'bra', 'BraA03t10936Z' => 'bra', 'BraA03t15657Z' => 'bra', 'BraA04t18100Z' => 'bra', 'BraA05t20523Z' => 'bra', 'BraA06t23353Z' => 'bra', 'BraA06t27473Z' => 'bra', 'BraA06t27769Z' => 'bra', 'BraA07t28928Z' => 'bra', 'BraA08t32236Z' => 'bra', 'BraA08t32841Z' => 'bra', 'BraA08t34524Z' => 'bra', 'BraA09t38742Z' => 'bra', 'BraA09t39295Z' => 'bra', 'C02p47180' => 'bna', 'C02p50990' => 'bna', 'C03p19360' => 'bna', 'C03p74950' => 'bna', 'C03p91000' => 'bna', 'C04p63260' => 'bna', 'C05p27050' => 'bna', 'C06p08750' => 'bna', 'C06p11490' => 'bna', 'C07p02820' => 'bna', 'C07p17180' => 'bna', 'C07p29440' => 'bna', 'C07p63730' => 'bna', 'C09p39260' => 'bna', 'CAN.G1164.34' => 'can', 'CAN.G1164.39' => 'can', 'CAN.G1530.3' => 'can', 'CAN.G162.61' => 'can', 'CAN.G176.6' => 'can', 'CAN.G289.49' => 'can', 'CAN.G370.21' => 'can', 'CAN.G370.22' => 'can', 'CAN.G371.117' => 'can', 'CAN.G58.37' => 'can', 'CAN.G588.98' => 'can', 'CANSAT21G2266' => 'cansat', 'CANSAT25G2799' => 'cansat', 'CANSAT35G0862' => 'cansat', 'CANSAT35G1704' => 'cansat', 'CANSAT35G1760' => 'cansat', 'CANSAT56G3971' => 'cansat', 'CANSAT56G4116' => 'cansat', 'CANSAT80G1259' => 'cansat', 'CARHR027730' => 'chi', 'CARHR033880' => 'chi', 'CARHR043270' => 'chi', 'CARHR145330' => 'chi', 'CARHR145340' => 'chi', 'CARHR175570' => 'chi', 'CARHR181570' => 'chi', 'CARHR258470' => 'chi', 'CARHR260490' => 'chi', 'CARHR294220' => 'chi', 'Carub.0001s2668' => 'cru', 'Carub.0001s3257' => 'cru', 'Carub.0001s4220' => 'cru', 'Carub.0005s0179' => 'cru', 'Carub.0006s2807' => 'cru', 'Carub.0007s0039' => 'cru', 'Carub.0008s0169' => 'cru', 'Carub.0008s0636' => 'cru', 'Ca_00338_v3' => 'car', 'Ca_00542_v3' => 'car', 'Ca_01844_v3' => 'car', 'Ca_10611_v3' => 'car', 'Ca_13326_v3' => 'car', 'Ca_17944_v3' => 'car', 'Ca_18546_v3' => 'car', 'Ca_24219_v3' => 'car', 'Ca_29972_v3' => 'car', 'CBR_g3681' => 'cbr', 'CBR_g40021' => 'cbr', 'Cc01_g08140' => 'ccan', 'Cc02_g13410' => 'ccan', 'Cc02_g37480' => 'ccan', 'Cc05_g12030' => 'ccan', 'Cc09_g03370' => 'ccan', 'Cc09_g10300' => 'ccan', 'Cc10_g03530' => 'ccan', 'Cc10_g11380' => 'ccan', 'CDE01G0176' => 'cde', 'CDE02G0675' => 'cde', 'CDE02G0942' => 'cde', 'CDE02G1153' => 'cde', 'CDE02G4177' => 'cde', 'CDE04G2117' => 'cde', 'CDE04G2736' => 'cde', 'CDE08G1161' => 'cde', 'CDE09G1238' => 'cde', 'Cfa000467' => 'cfa', 'Cfa000947' => 'cfa', 'Cfa004969' => 'cfa', 'Cfa005284' => 'cfa', 'Cfa008993' => 'cfa', 'Cfa018187' => 'cfa', 'Cfa018454' => 'cfa', 'Cfa020585' => 'cfa', 'Ciclev10000424m.g' => 'ccl', 'Ciclev10003605m.g' => 'ccl', 'Ciclev10007828m.g' => 'ccl', 'Ciclev10014620m.g' => 'ccl', 'Ciclev10015169m.g' => 'ccl', 'Ciclev10018291m.g' => 'ccl', 'Ciclev10028256m.g' => 'ccl', 'Ciclev10033822m.g' => 'ccl', 'CiPaw.05G060300' => 'cil', 'CiPaw.05G085000' => 'cil', 'CiPaw.06G083700' => 'cil', 'CiPaw.06G120300' => 'cil', 'CiPaw.09G060500' => 'cil', 'CiPaw.09G123800' => 'cil', 'CiPaw.11G169700' => 'cil', 'CiPaw.12G118300' => 'cil', 'CiPaw.15G071000' => 'cil', 'CiPaw.15G081900' => 'cil', 'ClCG01G024610' => 'cla', 'ClCG03G006070' => 'cla', 'ClCG05G019250' => 'cla', 'ClCG09G009500' => 'cla', 'ClCG11G008200' => 'cla', 'ClCG11G018080' => 'cla', 'COL.COLO4_17373' => 'col', 'COL.COLO4_22994' => 'col', 'COL.COLO4_26389' => 'col', 'COL.COLO4_27170' => 'col', 'COL.COLO4_31074' => 'col', 'COL.COLO4_31465' => 'col', 'COL.COLO4_36438' => 'col', 'COL.COLO4_36439' => 'col', 'Cpa.g.c38781' => 'cpa', 'Cpa.g.sc128.12' => 'cpa', 'Cpa.g.sc166.7' => 'cpa', 'Cpa.g.sc166.8' => 'cpa', 'Cpa.g.sc20.111' => 'cpa', 'Cpa.g.sc27.31' => 'cpa', 'Cpa.g.sc64.36' => 'cpa', 'Cpa.g.sc64.37' => 'cpa', 'Cpa.g.sc66.49' => 'cpa', 'Cpa.g.sc80.64' => 'cpa', 'CsaV3_1G012320' => 'csa', 'CsaV3_2G008480' => 'csa', 'CsaV3_2G033450' => 'csa', 'CsaV3_3G044830' => 'csa', 'CsaV3_4G033710' => 'csa', 'CsaV3_6G051730' => 'csa', 'CsaV3_7G025350' => 'csa', 'CSS0001067' => 'camsi', 'CSS0005996' => 'camsi', 'CSS0006590' => 'camsi', 'CSS0009673' => 'camsi', 'CSS0010201' => 'camsi', 'CSS0010549' => 'camsi', 'CSS0011364' => 'camsi', 'CSS0014473' => 'camsi', 'CSS0014961' => 'camsi', 'CSS0020191' => 'camsi', 'CSS0021165' => 'camsi', 'CSS0022306' => 'camsi', 'CSS0030591' => 'camsi', 'CSS0030696' => 'camsi', 'CSS0032653' => 'camsi', 'CSS0037487' => 'camsi', 'CSS0041102' => 'camsi', 'CSS0041261' => 'camsi', 'CSS0046246' => 'camsi', 'CSS0049256' => 'camsi', 'DCAR_004075' => 'dca', 'DCAR_011538' => 'dca', 'DCAR_019553' => 'dca', 'DCAR_020952' => 'dca', 'DCAR_021739' => 'dca', 'DCAR_027407' => 'dca', 'DCAR_027913' => 'dca', 'DCAR_028066' => 'dca', 'Dinv05899' => 'din', 'Dinv07563' => 'din', 'Dinv08010' => 'din', 'Dinv14125' => 'din', 'Dinv20172' => 'din', 'Dinv30743' => 'din', 'Dinv31229' => 'din', 'Dinv34162' => 'din', 'Dinv36028' => 'din', 'Dinv39368' => 'din', 'Dinv40565' => 'din', 'Dinv41706' => 'din', 'Duzib052G0089' => 'dzi', 'Duzib116G0641' => 'dzi', 'Duzib132G0069' => 'dzi', 'Duzib132G1219' => 'dzi', 'Duzib147G0278' => 'dzi', 'Duzib160G0480' => 'dzi', 'Duzib170G0661' => 'dzi', 'Duzib177G0591' => 'dzi', 'Duzib187G1353' => 'dzi', 'Duzib192G0858' => 'dzi', 'Duzib192G0883' => 'dzi', 'Duzib213G0506' => 'dzi', 'Duzib235G0289' => 'dzi', 'Duzib251G0422' => 'dzi', 'ECA232G3898' => 'eca', 'ECA233G5950' => 'eca', 'ECA234G1699' => 'eca', 'ECA234G2421' => 'eca', 'ECA236G0426' => 'eca', 'ECA236G4331' => 'eca', 'ECA248G2573' => 'eca', 'EL10Ac1g00077' => 'bvu', 'EL10Ac1g01746' => 'bvu', 'EL10Ac2g03464' => 'bvu', 'EL10Ac4g08176' => 'bvu', 'EL10Ac7g17521' => 'bvu', 'EL10Ac8g20386' => 'bvu', 'EL10Ac9g21343' => 'bvu', 'EL10Ac9g22688' => 'bvu', 'Eucgr.B03434' => 'egr', 'Eucgr.D00618' => 'egr', 'Eucgr.E02395' => 'egr', 'Eucgr.F01129' => 'egr', 'Eucgr.F02622' => 'egr', 'Eucgr.F04207' => 'egr', 'FAN01G0570' => 'fan', 'FAN03G3351' => 'fan', 'FAN06G3702' => 'fan', 'FAN07G2149' => 'fan', 'FAN10G3758' => 'fan', 'FAN11G1170' => 'fan', 'FAN11G2050' => 'fan', 'FAN11G2724' => 'fan', 'FAN12G1700' => 'fan', 'FAN12G2028' => 'fan', 'FAN15G1160' => 'fan', 'FAN15G3063' => 'fan', 'FAN16G2540' => 'fan', 'FAN16G3077' => 'fan', 'FAN16G3624' => 'fan', 'FAN17G0221' => 'fan', 'FAN20G2492' => 'fan', 'FAN20G2905' => 'fan', 'FAN21G0548' => 'fan', 'FAN21G1300' => 'fan', 'FAN22G0077' => 'fan', 'FAN22G1315' => 'fan', 'FAN24G1280' => 'fan', 'FAN24G1445' => 'fan', 'FAN24G3527' => 'fan', 'FAN25G0464' => 'fan', 'FAN25G2885' => 'fan', 'FAN25G3270' => 'fan', 'FAN27G1101' => 'fan', 'FAN27G2846' => 'fan', 'FAN27G3524' => 'fan', 'FvH4_2g11770' => 'fve', 'FvH4_2g15630' => 'fve', 'FvH4_3g05570' => 'fve', 'FvH4_3g09110' => 'fve', 'FvH4_3g19940' => 'fve', 'FvH4_4g04821' => 'fve', 'FvH4_4g31480' => 'fve', 'FvH4_7g01740' => 'fve', 'Glyma.05G130400' => 'gma', 'Glyma.05G156400' => 'gma', 'Glyma.07G197000' => 'gma', 'Glyma.08G085151' => 'gma', 'Glyma.08G114500' => 'gma', 'Glyma.08G300400' => 'gma', 'Glyma.10G215800' => 'gma', 'Glyma.12G224400' => 'gma', 'Glyma.13G179300' => 'gma', 'Glyma.13G218151' => 'gma', 'Glyma.13G238800' => 'gma', 'Glyma.13G276900' => 'gma', 'Glyma.14G078200' => 'gma', 'Glyma.15G074500' => 'gma', 'Glyma.15G094100' => 'gma', 'Glyma.17G247200' => 'gma', 'Glyma.18G120100' => 'gma', 'Glyma.20G176000' => 'gma', 'Gohir.A01G063600' => 'ghi', 'Gohir.A01G170301' => 'ghi', 'Gohir.A02G060500' => 'ghi', 'Gohir.A05G133850' => 'ghi', 'Gohir.A05G161400' => 'ghi', 'Gohir.A06G012900' => 'ghi', 'Gohir.A06G035901' => 'ghi', 'Gohir.A06G127100' => 'ghi', 'Gohir.A06G210500' => 'ghi', 'Gohir.A08G008650' => 'ghi', 'Gohir.A09G072700' => 'ghi', 'Gohir.A09G088301' => 'ghi', 'Gohir.A10G040600' => 'ghi', 'Gohir.A12G036300' => 'ghi', 'Gohir.A12G143350' => 'ghi', 'Gohir.A12G165500' => 'ghi', 'Gohir.A13G145700' => 'ghi', 'Gohir.D01G050000' => 'ghi', 'Gohir.D01G051366' => 'ghi', 'Gohir.D01G161350' => 'ghi', 'Gohir.D02G065900' => 'ghi', 'Gohir.D05G164200' => 'ghi', 'Gohir.D05G355500' => 'ghi', 'Gohir.D06G010400' => 'ghi', 'Gohir.D06G111250' => 'ghi', 'Gohir.D06G132000' => 'ghi', 'Gohir.D06G210500' => 'ghi', 'Gohir.D07G165675' => 'ghi', 'Gohir.D08G062240' => 'ghi', 'Gohir.D08G086101' => 'ghi', 'Gohir.D08G138060' => 'ghi', 'Gohir.D09G072300' => 'ghi', 'Gohir.D10G041400' => 'ghi', 'Gohir.D11G191020' => 'ghi', 'Gohir.D11G212066' => 'ghi', 'Gohir.D12G036300' => 'ghi', 'Gohir.D12G168600' => 'ghi', 'Gohir.D13G150600' => 'ghi', 'Gorai.001G057300' => 'gra', 'Gorai.002G069900' => 'gra', 'Gorai.002G200000' => 'gra', 'Gorai.003G067600' => 'gra', 'Gorai.005G074800' => 'gra', 'Gorai.006G087300' => 'gra', 'Gorai.008G037500' => 'gra', 'Gorai.008G181400' => 'gra', 'Gorai.009G169400' => 'gra', 'Gorai.009G387900' => 'gra', 'Gorai.010G013300' => 'gra', 'Gorai.010G153800' => 'gra', 'Gorai.010G255800' => 'gra', 'Gorai.011G043700' => 'gra', 'Gorai.011G198900' => 'gra', 'Gorai.013G168400' => 'gra', 'GSVIVG01005212001' => 'vvi', 'GSVIVG01006163001' => 'vvi', 'GSVIVG01009625001' => 'vvi', 'GSVIVG01014338001' => 'vvi', 'GSVIVG01020005001' => 'vvi', 'GSVIVG01021450001' => 'vvi', 'GSVIVG01023975001' => 'vvi', 'GSVIVG01034490001' => 'vvi', 'HanXRQChr04g0112071' => 'han', 'HanXRQChr05g0131151' => 'han', 'HanXRQChr09g0262371' => 'han', 'HanXRQChr09g0268401' => 'han', 'HanXRQChr10g0279241' => 'han', 'HanXRQChr10g0297961' => 'han', 'HanXRQChr11g0326231' => 'han', 'HanXRQChr11g0328471' => 'han', 'HanXRQChr16g0507941' => 'han', 'HanXRQChr17g0560211' => 'han', 'Haze_02108' => 'cav', 'Haze_02428' => 'cav', 'Haze_05593' => 'cav', 'Haze_06448' => 'cav', 'Haze_09427' => 'cav', 'Haze_12022' => 'cav', 'Haze_17612' => 'cav', 'Haze_17928' => 'cav', 'Hma1.2p1_0032F.1_g019250' => 'hma', 'Hma1.2p1_0163F.1_g072690' => 'hma', 'Hma1.2p1_0265F.1_g106710' => 'hma', 'Hma1.2p1_0286F.1_g113970' => 'hma', 'Hma1.2p1_0363F.1_g136640' => 'hma', 'Hma1.2p1_0584F.1_g183470' => 'hma', 'Hma1.2p1_0885F.1_g232570' => 'hma', 'HPP92_006022' => 'vpl', 'HPP92_007320' => 'vpl', 'HPP92_011521' => 'vpl', 'HPP92_019387' => 'vpl', 'HPP92_024038' => 'vpl', 'Hund05891' => 'sun', 'Hund06450' => 'sun', 'Hund12053' => 'sun', 'Hund16800' => 'sun', 'Hund21222' => 'sun', 'Hund22896' => 'sun', 'Hund23746' => 'sun', 'Hund27083' => 'sun', 'Lalb_Chr02g0141831' => 'lal', 'Lalb_Chr02g0141841' => 'lal', 'Lalb_Chr05g0220411' => 'lal', 'Lalb_Chr06g0162081' => 'lal', 'Lalb_Chr09g0327651' => 'lal', 'Lalb_Chr13g0295051' => 'lal', 'Lalb_Chr15g0086801' => 'lal', 'Lalb_Chr16g0383781' => 'lal', 'Lalb_Chr16g0383791' => 'lal', 'Lalb_Chr18g0055441' => 'lal', 'Lalb_Chr18g0059611' => 'lal', 'Lalb_Chr20g0109661' => 'lal', 'Lalb_Chr20g0109831' => 'lal', 'Lalb_Chr20g0121871' => 'lal', 'Lalb_Chr22g0355361' => 'lal', 'Lalb_Chr25g0286371' => 'lal', 'Lj1A1187G43' => 'lonja', 'Lj1A1205T50' => 'lonja', 'Lj1A800G33' => 'lonja', 'Lj1C1187T7' => 'lonja', 'Lj1C843T11' => 'lonja', 'Lj1g0010940' => 'lja', 'Lj2A288T69' => 'lonja', 'Lj3g0024276' => 'lja', 'Lj4A47T76' => 'lonja', 'Lj4g0005805' => 'lja', 'Lj4g0006097' => 'lja', 'Lj4g0008528' => 'lja', 'Lj4g0024907' => 'lja', 'Lj5g0012472' => 'lja', 'Lj5g0018648' => 'lja', 'Lj6C789G1' => 'lonja', 'Lj6g0004000' => 'lja', 'Lj7A292G67' => 'lonja', 'Lj7A292T64' => 'lonja', 'Lj9A400T58' => 'lonja', 'Lsat_1_v5_gn_1_126181' => 'lsa', 'Lsat_1_v5_gn_4_123041' => 'lsa', 'Lsat_1_v5_gn_4_133620' => 'lsa', 'Lsat_1_v5_gn_4_53221' => 'lsa', 'Lsat_1_v5_gn_4_71961' => 'lsa', 'Lsat_1_v5_gn_7_105241' => 'lsa', 'Lsat_1_v5_gn_7_21361' => 'lsa', 'Lsat_1_v5_gn_7_28860' => 'lsa', 'Lsat_1_v5_gn_7_31260' => 'lsa', 'Lsat_1_v5_gn_8_52801' => 'lsa', 'Manes.02G191400' => 'mes', 'Manes.03G110100' => 'mes', 'Manes.04G071100' => 'mes', 'Manes.05G100500' => 'mes', 'Manes.05G164700' => 'mes', 'Manes.15G087000' => 'mes', 'Manes.15G121500' => 'mes', 'Manes.16G028300' => 'mes', 'Manes.17G046100' => 'mes', 'Manes.17G069800' => 'mes', 'Manes.18G100500' => 'mes', 'Mapoly0002s0109' => 'mpo', 'Mapoly0024s0007' => 'mpo', 'Mapoly0089s0032' => 'mpo', 'MBI04_g42241_MAGBIO' => 'mbi', 'MBI05_g11988_MAGBIO' => 'mbi', 'MBI05_g35452_MAGBIO' => 'mbi', 'MBI07_g30179_MAGBIO' => 'mbi', 'MBI07_g35859_MAGBIO' => 'mbi', 'MBI07_g35860_MAGBIO' => 'mbi', 'MBI07_g37166_MAGBIO' => 'mbi', 'MBI08_g18172_MAGBIO' => 'mbi', 'MBI09_g08441_MAGBIO' => 'mbi', 'MBI13_g01676_MAGBIO' => 'mbi', 'MBI14_g42955_MAGBIO' => 'mbi', 'MBI16_g13161_MAGBIO' => 'mbi', 'MBI17_g27204_MAGBIO' => 'mbi', 'MBI19_g21595_MAGBIO' => 'mbi', 'MD00G1148400' => 'mdo', 'MD02G1301200' => 'mdo', 'MD03G1227800' => 'mdo', 'MD05G1041100' => 'mdo', 'MD05G1124800' => 'mdo', 'MD05G1284000' => 'mdo', 'MD05G1338800' => 'mdo', 'MD05G1338900' => 'mdo', 'MD07G1022800' => 'mdo', 'MD10G1047500' => 'mdo', 'MD10G1127500' => 'mdo', 'MD10G1262300' => 'mdo', 'MD10G1293800' => 'mdo', 'MD16G1074300' => 'mdo', 'Medtr1g021670' => 'mtr', 'Medtr1g096320' => 'mtr', 'Medtr2g013690' => 'mtr', 'Medtr2g019450' => 'mtr', 'Medtr2g085170' => 'mtr', 'Medtr4g088785' => 'mtr', 'Medtr8g055930' => 'mtr', 'Medtr8g085850' => 'mtr', 'MELO3C002605.2' => 'cme', 'MELO3C003891.2' => 'cme', 'MELO3C004012.2' => 'cme', 'MELO3C007134.2' => 'cme', 'MELO3C008118.2' => 'cme', 'MELO3C016700.2' => 'cme', 'MELO3C024127.2' => 'cme', 'MELO3C033361.2' => 'cme', 'MELO3C033362.2' => 'cme', 'Migut.C00430' => 'egut', 'Migut.C01246' => 'egut', 'Migut.E00101' => 'egut', 'Migut.H01486' => 'egut', 'Migut.H01939' => 'egut', 'Migut.K00360' => 'egut', 'Migut.M00910' => 'egut', 'Migut.M01139' => 'egut', 'Migut.N02677' => 'egut', 'MSTRG.13252' => 'ama', 'MSTRG.14701' => 'ama', 'MSTRG.1521' => 'ama', 'MSTRG.15884' => 'ama', 'MSTRG.16242' => 'ama', 'MSTRG.22285' => 'ama', 'MSTRG.22444' => 'ama', 'MSTRG.2349' => 'ama', 'MSTRG.26308' => 'ama', 'MSTRG.28296' => 'ama', 'MSTRG.9895' => 'ama', 'Nitab4.5_0000110g0060' => 'nta', 'Nitab4.5_0000420g0130' => 'nta', 'Nitab4.5_0000422g0030' => 'nta', 'Nitab4.5_0000560g0180' => 'nta', 'Nitab4.5_0000703g0100' => 'nta', 'Nitab4.5_0000786g0200' => 'nta', 'Nitab4.5_0001336g0020' => 'nta', 'Nitab4.5_0001796g0030' => 'nta', 'Nitab4.5_0003348g0060' => 'nta', 'Nitab4.5_0003698g0040' => 'nta', 'Nitab4.5_0003942g0090' => 'nta', 'Nitab4.5_0004775g0070' => 'nta', 'Nitab4.5_0004864g0030' => 'nta', 'Nitab4.5_0005615g0020' => 'nta', 'Nitab4.5_0009288g0030' => 'nta', 'Nitab4.5_0009341g0010' => 'nta', 'Nitab4.5_0009535g0010' => 'nta', 'Nn1g03995' => 'nnu', 'Nn1g04100' => 'nnu', 'Nn1g06530' => 'nnu', 'Nn3g16404' => 'nnu', 'Nn3g17212' => 'nnu', 'Nn3g20776' => 'nnu', 'Nn3g21923' => 'nnu', 'Nn5g27737' => 'nnu', 'Nn5g29461' => 'nnu', 'Nn7g38355' => 'nnu', 'Nn8g39873' => 'nnu', 'Oeu000548.2' => 'oeu', 'Oeu004672.1' => 'oeu', 'Oeu015605.2' => 'oeu', 'Oeu016092.1' => 'oeu', 'Oeu017879.3' => 'oeu', 'Oeu024910.1' => 'oeu', 'Oeu028965.1' => 'oeu', 'Oeu031269.1' => 'oeu', 'Oeu031270.1' => 'oeu', 'Oeu032535.1' => 'oeu', 'Oeu034151.1' => 'oeu', 'Oeu034152.1' => 'oeu', 'Oeu034588.2' => 'oeu', 'Oeu050846.1' => 'oeu', 'Oeu050849.2' => 'oeu', 'Oeu051063.2' => 'oeu', 'Oeu052368.1' => 'oeu', 'Oeu052370.1' => 'oeu', 'Os01g0210400' => 'osa', 'Os01g0304300' => 'osa', 'Os01g0749100' => 'osa', 'Os02g0745800' => 'osa', 'Os03g0769050' => 'osa', 'Os05g0531500' => 'osa', 'Os06g0724300' => 'osa', 'Os11g0198100' => 'osa', 'Peaxi162Scf00069g01425' => 'pax', 'Peaxi162Scf00280g00811' => 'pax', 'Peaxi162Scf00310g00615' => 'pax', 'Peaxi162Scf00362g00542' => 'pax', 'Peaxi162Scf00461g00310' => 'pax', 'Peaxi162Scf00530g00118' => 'pax', 'Peaxi162Scf00541g00057' => 'pax', 'Peaxi162Scf00661g00017' => 'pax', 'Peaxi162Scf00926g00027' => 'pax', 'Peaxi162Scf01064g00263' => 'pax', 'Peaxi162Scf01211g00135' => 'pax', 'PGR004G2336' => 'pgr', 'PGR042G0327' => 'pgr', 'PGR042G1957' => 'pgr', 'PGR042G2003' => 'pgr', 'PGR042G3929' => 'pgr', 'PGR083G1137' => 'pgr', 'PGR083G1364' => 'pgr', 'PGSC0003DMG400003381' => 'stu', 'PGSC0003DMG400003417' => 'stu', 'PGSC0003DMG400008981' => 'stu', 'PGSC0003DMG400012417' => 'stu', 'PGSC0003DMG400012823' => 'stu', 'PGSC0003DMG400016885' => 'stu', 'PGSC0003DMG400022812' => 'stu', 'PGSC0003DMG400029726' => 'stu', 'PGSC0003DMG401009243' => 'stu', 'PGSC0003DMG401031505' => 'stu', 'PGSC0003DMG402031505' => 'stu', 'Phvul.001G017600' => 'pvu', 'Phvul.002G193500' => 'pvu', 'Phvul.002G228900' => 'pvu', 'Phvul.002G236800' => 'pvu', 'Phvul.003G049500' => 'pvu', 'Phvul.005G072000' => 'pvu', 'Phvul.006G164800' => 'pvu', 'Phvul.006G185100' => 'pvu', 'Phvul.007G090000' => 'pvu', 'Potri.001G399800' => 'ptr', 'Potri.002G149900' => 'ptr', 'Potri.004G044100' => 'ptr', 'Potri.004G177600' => 'ptr', 'Potri.009G138000' => 'ptr', 'Potri.010G094000' => 'ptr', 'Potri.011G053000' => 'ptr', 'Potri.011G119300' => 'ptr', 'Potri.013G113700' => 'ptr', 'Potri.018G107800' => 'ptr', 'Potri.019G084100' => 'ptr', 'Pp3c14_23720' => 'ppa', 'Pp3c16_6340' => 'ppa', 'Pp3c23_13420' => 'ppa', 'Pp3c24_2740' => 'ppa', 'Pp3c25_860' => 'ppa', 'Pp3c8_21750' => 'ppa', 'Prupe.1G273000' => 'ppe', 'Prupe.1G273700' => 'ppe', 'Prupe.1G274100' => 'ppe', 'Prupe.2G023300' => 'ppe', 'Prupe.4G048000' => 'ppe', 'Prupe.4G080400' => 'ppe', 'Prupe.4G181200' => 'ppe', 'Prupe.8G056900' => 'ppe', 'Prupe.8G168700' => 'ppe', 'Psat1g189080' => 'psa', 'Psat1g204760' => 'psa', 'Psat4g175560' => 'psa', 'Psat4g177720' => 'psa', 'Psat5g244240' => 'psa', 'Psat6g010720' => 'psa', 'Psat6g187200' => 'psa', 'Psat7g072040' => 'psa', 'PSO017G3501' => 'pso', 'PSO063G2148' => 'pso', 'PSO063G5608' => 'pso', 'PSO210G6392' => 'pso', 'PSO541G2319' => 'pso', 'PSO541G2836' => 'pso', 'PSO541G4012' => 'pso', 'PSO541G6253' => 'pso', 'PSO675G0580' => 'pso', 'PSO675G0856' => 'pso', 'PSO675G5635' => 'pso', 'PSO675G9157' => 'pso', 'PSO832G1660' => 'pso', 'PSO832G1969' => 'pso', 'QL02p007186' => 'qlo', 'QL02p033904' => 'qlo', 'QL03p064391' => 'qlo', 'QL05p040593' => 'qlo', 'QL05p058242' => 'qlo', 'QL08p021825' => 'qlo', 'QL11p004981' => 'qlo', 'RcHm_v2.0_Chr1g0318301' => 'rch', 'RcHm_v2.0_Chr4g0418501' => 'rch', 'RcHm_v2.0_Chr4g0439971' => 'rch', 'RcHm_v2.0_Chr5g0008541' => 'rch', 'RcHm_v2.0_Chr5g0014101' => 'rch', 'RcHm_v2.0_Chr5g0014131' => 'rch', 'RcHm_v2.0_Chr5g0033621' => 'rch', 'RcHm_v2.0_Chr6g0272041' => 'rch', 'RcHm_v2.0_Chr6g0278831' => 'rch', 'Rhsim02G0130400' => 'rsi', 'Rhsim02G0171100' => 'rsi', 'Rhsim05G0053000' => 'rsi', 'Rhsim05G0053100' => 'rsi', 'Rhsim06G0096500' => 'rsi', 'Rhsim06G0096600' => 'rsi', 'Rhsim06G0199100' => 'rsi', 'Rhsim12G0062300' => 'rsi', 'Rhsim12G0062800' => 'rsi', 'Sabra02G0118600' => 'sbr', 'Sabra04G0027300' => 'sbr', 'Sabra04G0119500' => 'sbr', 'Sabra08G0112500' => 'sbr', 'Sabra11G0036800' => 'sbr', 'Sabra11G0103800' => 'sbr', 'Sabra13G0096300' => 'sbr', 'Sabra16G0262300' => 'sbr', 'Sabra18G0091700' => 'sbr', 'Sabra19G0095400' => 'sbr', 'SalBow6G3080' => 'sbo', 'SalBow7G1157' => 'sbo', 'SalBow7G2123' => 'sbo', 'SalBow7G2285' => 'sbo', 'SalBow7G3537' => 'sbo', 'SalBow8G2947' => 'sbo', 'SalBow8G4463' => 'sbo', 'SalBow8G5466' => 'sbo', 'Sc01g0001750' => 'sci', 'Sc02g0006640' => 'sci', 'Sc02g0006670' => 'sci', 'Sc04g0008220' => 'sci', 'Sc05g0006190' => 'sci', 'Sc08g0002760' => 'sci', 'Sc17g0006170' => 'sci', 'Sc22g0002050' => 'sci', 'Sc23g0001190' => 'sci', 'Sc24g0000980' => 'sci', 'Sed0006245' => 'sed', 'Sed0007543' => 'sed', 'Sed0009411' => 'sed', 'Sed0010765' => 'sed', 'Sed0012944' => 'sed', 'Sed0014682' => 'sed', 'Sed0016174' => 'sed', 'Sed0016796' => 'sed', 'Sed0020317' => 'sed', 'Sed0021467' => 'sed', 'SEGI_01316' => 'sgi', 'SEGI_03374' => 'sgi', 'SEGI_16265' => 'sgi', 'SEGI_18569' => 'sgi', 'SEGI_20351' => 'sgi', 'SEGI_26395' => 'sgi', 'SEGI_29469' => 'sgi', 'SEGI_34771' => 'sgi', 'SEGI_36769' => 'sgi', 'SEGI_37139' => 'sgi', 'SGA_v2.0_scaffold100G29687' => 'sas', 'SGA_v2.0_scaffold118G32472' => 'sas', 'SGA_v2.0_scaffold14G07051' => 'sas', 'SGA_v2.0_scaffold183G39845' => 'sas', 'SGA_v2.0_scaffold1G00174' => 'sas', 'SGA_v2.0_scaffold22G09714' => 'sas', 'SGA_v2.0_scaffold333G48992' => 'sas', 'SGA_v2.0_scaffold46G17491' => 'sas', 'SGA_v2.0_scaffold49G18294' => 'sas', 'SGA_v2.0_scaffold63G21658' => 'sas', 'SHI01741' => 'shi', 'SHI05771' => 'shi', 'SHI18077' => 'shi', 'SHI20525' => 'shi', 'SHI20527' => 'shi', 'SHI20528' => 'shi', 'SMO172G0185' => 'smo', 'SMO198G0020' => 'smo', 'SMO351G0006' => 'smo', 'SMO356G0118' => 'smo', 'SMO358G0296' => 'smo', 'SMO367G0079' => 'smo', 'SMO367G1277' => 'smo', 'Solyc01g014220.3' => 'sly', 'Solyc01g111770.2' => 'sly', 'Solyc02g078180.3' => 'sly', 'Solyc03g006430.3' => 'sly', 'Solyc03g006456.1' => 'sly', 'Solyc03g079860.2' => 'sly', 'Solyc04g079770.3' => 'sly', 'Solyc05g007430.4' => 'sly', 'Solyc07g063150.3' => 'sly', 'Solyc08g016620.3' => 'sly', 'Solyc09g057590.3' => 'sly', 'Solyc09g057600.1' => 'sly', 'Solyc10g009050.3' => 'sly', 'Solyc11g017420.2' => 'sly', 'Sopen01g053810' => 'spe', 'Sopen02g023040' => 'spe', 'Sopen03g002440' => 'spe', 'Sopen04g033350' => 'spe', 'Sopen05g003310' => 'spe', 'Sopen07g004050' => 'spe', 'Sopen07g031340' => 'spe', 'Sopen08g006990' => 'spe', 'Sopen10g004830' => 'spe', 'Sopen11g009370' => 'spe', 'Sp1g24450' => 'spa', 'Sp1g29670' => 'spa', 'Sp1g39600' => 'spa', 'Sp2g11080' => 'spa', 'Sp2g13970' => 'spa', 'Sp4g16130' => 'spa', 'Sp6g13080' => 'spa', 'Sp7g37270' => 'spa', 'TAR371G0065' => 'tar', 'TAR376G0340' => 'tar', 'TAR376G0435' => 'tar', 'TAR381G0002' => 'tar', 'TAR381G1236' => 'tar', 'TAR624G0055' => 'tar', 'TAR624G0324' => 'tar', 'TAR624G0696' => 'tar', 'TAR624G0906' => 'tar', 'TAR625G0107' => 'tar', 'TAR626G0015' => 'tar', 'TAR626G1356' => 'tar', 'TAR627G0888' => 'tar', 'TAR628G0399' => 'tar', 'TAR628G1327' => 'tar', 'TAR629G2831' => 'tar', 'TAR629G2874' => 'tar', 'TAR633G1432' => 'tar', 'TAR633G2771' => 'tar', 'THA.LOC104803394' => 'tha', 'THA.LOC104805153' => 'tha', 'THA.LOC104806784' => 'tha', 'THA.LOC104810473' => 'tha', 'THA.LOC104813100' => 'tha', 'THA.LOC104814215' => 'tha', 'THA.LOC104815554' => 'tha', 'THA.LOC104820544' => 'tha', 'THA.LOC104824754' => 'tha', 'THA.LOC104827717' => 'tha', 'Thecc.02G031400' => 'tca', 'Thecc.02G055900' => 'tca', 'Thecc.02G350800' => 'tca', 'Thecc.06G150900' => 'tca', 'Thecc.06G186600' => 'tca', 'Thecc.07G089600' => 'tca', 'Thecc.08G020400' => 'tca', 'Thecc.08G182100' => 'tca', 'Thhalv10000873m.g' => 'esa', 'Thhalv10004185m.g' => 'esa', 'Thhalv10006981m.g' => 'esa', 'Thhalv10007204m.g' => 'esa', 'Thhalv10011374m.g' => 'esa', 'Thhalv10013482m.g' => 'esa', 'Thhalv10017801m.g' => 'esa', 'Thhalv10024983m.g' => 'esa', 'TPR.G12072' => 'tpr', 'TPR.G15769' => 'tpr', 'TPR.G16504' => 'tpr', 'TPR.G16506' => 'tpr', 'TPR.G24345' => 'tpr', 'TPR.G26666' => 'tpr', 'TPR.G27320' => 'tpr', 'TPR.G31819' => 'tpr', 'TPR.G38879' => 'tpr', 'TPR.G39015' => 'tpr', 'TPR.G8819' => 'tpr', 'TWI09G0924' => 'twi', 'TWI12G0811' => 'twi', 'TWI12G1294' => 'twi', 'TWI31G0150' => 'twi', 'TWI36G1262' => 'twi', 'TWI38G1287' => 'twi', 'TWI38G1633' => 'twi', 'TWI38G1982' => 'twi', 'TWI39G0116' => 'twi', 'TWI60G1011' => 'twi', 'TWI63G0171' => 'twi', 'TWI73G0839' => 'twi', 'TWI79G1511' => 'twi', 'unitig_0.g915' => 'ugi', 'unitig_0.g916' => 'ugi', 'unitig_21.g20219' => 'ugi', 'unitig_21.g20416' => 'ugi', 'unitig_578.g16132' => 'ugi', 'unitig_578.g16718' => 'ugi', 'unitig_62.g23481' => 'ugi', 'unitig_744.g24535' => 'ugi', 'unitig_749.g13525' => 'ugi', 'vmacro01248' => 'vma', 'vmacro02290' => 'vma', 'vmacro10946' => 'vma', 'vmacro11865' => 'vma', 'vmacro12493' => 'vma', 'vmacro17322' => 'vma', 'vmacro21599' => 'vma', 'vmacro23041' => 'vma', 'VMungo0251G0004' => 'vmu', 'VMungo0251G2639' => 'vmu', 'VMungo0251G2967' => 'vmu', 'VMungo0540G0864' => 'vmu', 'VMungo0540G1569' => 'vmu', 'VMungo0647G0317' => 'vmu', 'VMungo0720G1373' => 'vmu', 'VMungo0720G1508' => 'vmu', 'VMungo1080G0485' => 'vmu', 'VMungo1215G3177' => 'vmu', 'Zm00001eb112600' => 'zma', 'Zm00001eb120220' => 'zma', 'Zm00001eb153240' => 'zma', 'Zm00001eb168880' => 'zma', 'Zm00001eb213920' => 'zma', 'Zm00001eb228280' => 'zma', 'Zm00001eb254580' => 'zma', 'Zm00001eb272180' => 'zma', 'Zm00001eb293190' => 'zma', 'Zm00001eb322930' => 'zma', 'Zm00001eb353360' => 'zma', 'Zm00001eb353390' => 'zma', 'Zm00001eb353430' => 'zma', 'Zm00001eb353440' => 'zma', 'Zm00001eb353780' => 'zma' ) $gf_id = 'HOM05D000499' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000499' ) $data_identifier = 'HOM05D000499' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 29, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 12, 'amhyb' => (int) 8, 'aly' => (int) 12, 'aox' => (int) 9, 'arhy' => (int) 26, 'ath' => (int) 8, 'atr' => (int) 7, 'acertr' => (int) 10, 'cqu' => (int) 15, 'bca' => (int) 29, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 11, 'cansat' => (int) 8, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 9, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 8, 'cpa' => (int) 10, 'csa' => (int) 7, 'camsi' => (int) 20, 'dca' => (int) 8, 'din' => (int) 12, 'dzi' => (int) 14, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 6, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 38, 'gra' => (int) 16, 'vvi' => (int) 8, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 5, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 11, 'lja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 11, 'mpo' => (int) 3, 'mbi' => (int) 14, 'mdo' => (int) 14, 'mtr' => (int) 8, 'cme' => (int) 9, 'egut' => (int) 9, 'ama' => (int) 11, 'nta' => (int) 17, 'nnu' => (int) 11, 'oeu' => (int) 18, 'osa' => (int) 8, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 6, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 9, 'rsi' => (int) 9, 'sbr' => (int) 10, 'sbo' => (int) 8, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 10, 'sas' => (int) 10, 'shi' => (int) 6, 'smo' => (int) 7, 'sly' => (int) 14, 'spe' => (int) 10, 'spa' => (int) 8, 'tar' => (int) 19, 'tha' => (int) 10, 'tca' => (int) 8, 'esa' => (int) 8, 'tpr' => (int) 11, 'twi' => (int) 13, 'ugi' => (int) 9, 'vma' => (int) 8, 'vmu' => (int) 10, 'zma' => (int) 15 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb353780' $species_info = array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ) $local_species = 'car' $disabled = '' $selected = '' $num_hits = (int) 0
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000499', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1066', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p29780' => 'bna', 'A02p33180' => 'bna', 'A03p16470' => 'bna', 'A03p66010' => 'bna', 'A04p25970' => 'bna', 'A06p01270' => 'bna', 'A06p46080' => 'bna', 'A07p11400' => 'bna', 'A08p01840' => 'bna', 'A08p08230' => 'bna', 'A08p25740' => 'bna', 'A09p32070' => 'bna', 'A09p37830' => 'bna', 'A09p42840' => 'bna', 'A09p42850' => 'bna', 'Aa31LG10G2060' => 'aar', 'Aa31LG2G7410' => 'aar', 'Aa31LG6G10200' => 'aar', 'Aa31LG6G16680' => 'aar', 'Aa31LG6G8470' => 'aar', 'Aa31LG9G12730' => 'aar', 'Aa31LG9G13680' => 'aar', 'Aa31LG9G14920' => 'aar', 'Aa31LG9G6650' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4977' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5467' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3254' => 'aag', 'Actinidia02578' => 'ach', 'Actinidia07693' => 'ach', 'Actinidia08413' => 'ach', 'Actinidia08414' => 'ach', 'Actinidia15289' => 'ach', 'Actinidia19871' => 'ach', 'Actinidia21475' => 'ach', 'Actinidia22576' => 'ach', 'Actinidia28327' => 'ach', 'Actinidia32491' => 'ach', 'Actinidia39463' => 'ach', 'Actinidia39571' => 'ach', 'Ah.01g013750' => 'amhyb', 'Ah.01g023210' => 'amhyb', 'Ah.04g164850' => 'amhyb', 'Ah.05g178060' => 'amhyb', 'Ah.07g204270' => 'amhyb', 'Ah.07g208480' => 'amhyb', 'Ah.09g237410' => 'amhyb', 'Ah.14g089460' => 'amhyb', 'AL1G41790' => 'aly', 'AL1G49050' => 'aly', 'AL1G53810' => 'aly', 'AL1G61400' => 'aly', 'AL4G18580' => 'aly', 'AL5G12510' => 'aly', 'AL5G12540' => 'aly', 'AL6G43230' => 'aly', 'AL7G10370' => 'aly', 'AL7G19250' => 'aly', 'AL8G12240' => 'aly', 'AL8G18540' => 'aly', 'Aqoxy1G02409' => 'aox', 'Aqoxy2G03993' => 'aox', 'Aqoxy3G03357' => 'aox', 'Aqoxy4G00785' => 'aox', 'Aqoxy5G02598' => 'aox', 'Aqoxy6G00132' => 'aox', 'Aqoxy7G01776' => 'aox', 'Aqoxy7G02316' => 'aox', 'Aqoxy7G03973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.12AFKW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B8730' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27IQR1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3F75VG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3RE0GA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41TCQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.527VTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FIR39' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5W8UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DA38EV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ63HS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H1I32C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HC27T5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4M8AP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7N3CZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9UVDZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LS1NQA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT1D4B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SKC4TM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCFV76' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF9Q1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQWD9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1ZM88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WE07RT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YCK7VH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJE6Q6' => 'arhy', 'AT1G28240' => 'ath', 'AT1G34550' => 'ath', 'AT1G53040' => 'ath', 'AT2G02910' => 'ath', 'AT4G09630' => 'ath', 'AT4G38500' => 'ath', 'AT5G42660' => 'ath', 'AT5G46220' => 'ath', 'ATR0152G026' => 'atr', 'ATR0564G343' => 'atr', 'ATR0706G151' => 'atr', 'ATR0733G207' => 'atr', 'ATR0751G234' => 'atr', 'ATR0807G048' => 'atr', 'ATR1091G084' => 'atr', 'Atru.chr10.1229' => 'acertr', 'Atru.chr10.1230' => 'acertr', 'Atru.chr10.1874' => 'acertr', 'Atru.chr11.1808' => 'acertr', 'Atru.chr13.1795' => 'acertr', 'Atru.chr13.570' => 'acertr', 'Atru.chr2.2608' => 'acertr', 'Atru.chr2.2609' => 'acertr', 'Atru.chr5.3428' => 'acertr', 'Atru.chr8.1171' => 'acertr', 'AUR62004651' => 'cqu', 'AUR62008675' => 'cqu', 'AUR62010014' => 'cqu', 'AUR62013004' => 'cqu', 'AUR62014825' => 'cqu', 'AUR62015015' => 'cqu', 'AUR62015151' => 'cqu', 'AUR62017020' => 'cqu', 'AUR62019422' => 'cqu', 'AUR62023570' => 'cqu', 'AUR62025571' => 'cqu', 'AUR62029098' => 'cqu', 'AUR62033863' => 'cqu', 'AUR62034296' => 'cqu', 'AUR62040075' => 'cqu', 'BcaB02g07334' => 'bca', 'BcaB02g10575' => 'bca', 'BcaB03g12119' => 'bca', 'BcaB03g12120' => 'bca', 'BcaB03g13945' => 'bca', 'BcaB04g17123' => 'bca', 'BcaB04g17867' => 'bca', 'BcaB04g19839' => 'bca', 'BcaB07g30317' => 'bca', 'BcaB07g32432' => 'bca', 'BcaB07g33362' => 'bca', 'BcaB08g36611' => 'bca', 'BcaC01g00028' => 'bca', 'BcaC01g01356' => 'bca', 'BcaC01g02034' => 'bca', 'BcaC01g06051' => 'bca', 'BcaC03g16839' => 'bca', 'BcaC03g17176' => 'bca', 'BcaC05g26829' => 'bca', 'BcaC06g31490' => 'bca', 'BcaC06g35344' => 'bca', 'BcaC06g36570' => 'bca', 'BcaC07g37537' => 'bca', 'BcaC08g43491' => 'bca', 'BcaC08g43773' => 'bca', 'BcaNung00234' => 'bca', 'BcaNung01982' => 'bca', 'BcaNung03707' => 'bca', 'BcaNung06454' => 'bca', 'BolC2t10762H' => 'bol', 'BolC2t11191H' => 'bol', 'BolC3t14322H' => 'bol', 'BolC3t19747H' => 'bol', 'BolC3t21425H' => 'bol', 'BolC4t27800H' => 'bol', 'BolC5t31423H' => 'bol', 'BolC6t35951H' => 'bol', 'BolC6t36282H' => 'bol', 'BolC7t40678H' => 'bol', 'BolC7t40679H' => 'bol', 'BolC7t42222H' => 'bol', 'BolC7t43492H' => 'bol', 'BolC7t46785H' => 'bol', 'BolC8t47853H' => 'bol', 'BolC9t56805H' => 'bol', 'BraA02t08000Z' => 'bra', 'BraA02t08341Z' => 'bra', 'BraA03t10936Z' => 'bra', 'BraA03t15657Z' => 'bra', 'BraA04t18100Z' => 'bra', 'BraA05t20523Z' => 'bra', 'BraA06t23353Z' => 'bra', 'BraA06t27473Z' => 'bra', 'BraA06t27769Z' => 'bra', 'BraA07t28928Z' => 'bra', 'BraA08t32236Z' => 'bra', 'BraA08t32841Z' => 'bra', 'BraA08t34524Z' => 'bra', 'BraA09t38742Z' => 'bra', 'BraA09t39295Z' => 'bra', 'C02p47180' => 'bna', 'C02p50990' => 'bna', 'C03p19360' => 'bna', 'C03p74950' => 'bna', 'C03p91000' => 'bna', 'C04p63260' => 'bna', 'C05p27050' => 'bna', 'C06p08750' => 'bna', 'C06p11490' => 'bna', 'C07p02820' => 'bna', 'C07p17180' => 'bna', 'C07p29440' => 'bna', 'C07p63730' => 'bna', 'C09p39260' => 'bna', 'CAN.G1164.34' => 'can', 'CAN.G1164.39' => 'can', 'CAN.G1530.3' => 'can', 'CAN.G162.61' => 'can', 'CAN.G176.6' => 'can', 'CAN.G289.49' => 'can', 'CAN.G370.21' => 'can', 'CAN.G370.22' => 'can', 'CAN.G371.117' => 'can', 'CAN.G58.37' => 'can', 'CAN.G588.98' => 'can', 'CANSAT21G2266' => 'cansat', 'CANSAT25G2799' => 'cansat', 'CANSAT35G0862' => 'cansat', 'CANSAT35G1704' => 'cansat', 'CANSAT35G1760' => 'cansat', 'CANSAT56G3971' => 'cansat', 'CANSAT56G4116' => 'cansat', 'CANSAT80G1259' => 'cansat', 'CARHR027730' => 'chi', 'CARHR033880' => 'chi', 'CARHR043270' => 'chi', 'CARHR145330' => 'chi', 'CARHR145340' => 'chi', 'CARHR175570' => 'chi', 'CARHR181570' => 'chi', 'CARHR258470' => 'chi', 'CARHR260490' => 'chi', 'CARHR294220' => 'chi', 'Carub.0001s2668' => 'cru', 'Carub.0001s3257' => 'cru', 'Carub.0001s4220' => 'cru', 'Carub.0005s0179' => 'cru', 'Carub.0006s2807' => 'cru', 'Carub.0007s0039' => 'cru', 'Carub.0008s0169' => 'cru', 'Carub.0008s0636' => 'cru', 'Ca_00338_v3' => 'car', 'Ca_00542_v3' => 'car', 'Ca_01844_v3' => 'car', 'Ca_10611_v3' => 'car', 'Ca_13326_v3' => 'car', 'Ca_17944_v3' => 'car', 'Ca_18546_v3' => 'car', 'Ca_24219_v3' => 'car', 'Ca_29972_v3' => 'car', 'CBR_g3681' => 'cbr', 'CBR_g40021' => 'cbr', 'Cc01_g08140' => 'ccan', 'Cc02_g13410' => 'ccan', 'Cc02_g37480' => 'ccan', 'Cc05_g12030' => 'ccan', 'Cc09_g03370' => 'ccan', 'Cc09_g10300' => 'ccan', 'Cc10_g03530' => 'ccan', 'Cc10_g11380' => 'ccan', 'CDE01G0176' => 'cde', 'CDE02G0675' => 'cde', 'CDE02G0942' => 'cde', 'CDE02G1153' => 'cde', 'CDE02G4177' => 'cde', 'CDE04G2117' => 'cde', 'CDE04G2736' => 'cde', 'CDE08G1161' => 'cde', 'CDE09G1238' => 'cde', 'Cfa000467' => 'cfa', 'Cfa000947' => 'cfa', 'Cfa004969' => 'cfa', 'Cfa005284' => 'cfa', 'Cfa008993' => 'cfa', 'Cfa018187' => 'cfa', 'Cfa018454' => 'cfa', 'Cfa020585' => 'cfa', 'Ciclev10000424m.g' => 'ccl', 'Ciclev10003605m.g' => 'ccl', 'Ciclev10007828m.g' => 'ccl', 'Ciclev10014620m.g' => 'ccl', 'Ciclev10015169m.g' => 'ccl', 'Ciclev10018291m.g' => 'ccl', 'Ciclev10028256m.g' => 'ccl', 'Ciclev10033822m.g' => 'ccl', 'CiPaw.05G060300' => 'cil', 'CiPaw.05G085000' => 'cil', 'CiPaw.06G083700' => 'cil', 'CiPaw.06G120300' => 'cil', 'CiPaw.09G060500' => 'cil', 'CiPaw.09G123800' => 'cil', 'CiPaw.11G169700' => 'cil', 'CiPaw.12G118300' => 'cil', 'CiPaw.15G071000' => 'cil', 'CiPaw.15G081900' => 'cil', 'ClCG01G024610' => 'cla', 'ClCG03G006070' => 'cla', 'ClCG05G019250' => 'cla', 'ClCG09G009500' => 'cla', 'ClCG11G008200' => 'cla', 'ClCG11G018080' => 'cla', 'COL.COLO4_17373' => 'col', 'COL.COLO4_22994' => 'col', 'COL.COLO4_26389' => 'col', 'COL.COLO4_27170' => 'col', 'COL.COLO4_31074' => 'col', 'COL.COLO4_31465' => 'col', 'COL.COLO4_36438' => 'col', 'COL.COLO4_36439' => 'col', 'Cpa.g.c38781' => 'cpa', 'Cpa.g.sc128.12' => 'cpa', 'Cpa.g.sc166.7' => 'cpa', 'Cpa.g.sc166.8' => 'cpa', 'Cpa.g.sc20.111' => 'cpa', 'Cpa.g.sc27.31' => 'cpa', 'Cpa.g.sc64.36' => 'cpa', 'Cpa.g.sc64.37' => 'cpa', 'Cpa.g.sc66.49' => 'cpa', 'Cpa.g.sc80.64' => 'cpa', 'CsaV3_1G012320' => 'csa', 'CsaV3_2G008480' => 'csa', 'CsaV3_2G033450' => 'csa', 'CsaV3_3G044830' => 'csa', 'CsaV3_4G033710' => 'csa', 'CsaV3_6G051730' => 'csa', 'CsaV3_7G025350' => 'csa', 'CSS0001067' => 'camsi', 'CSS0005996' => 'camsi', 'CSS0006590' => 'camsi', 'CSS0009673' => 'camsi', 'CSS0010201' => 'camsi', 'CSS0010549' => 'camsi', 'CSS0011364' => 'camsi', 'CSS0014473' => 'camsi', 'CSS0014961' => 'camsi', 'CSS0020191' => 'camsi', 'CSS0021165' => 'camsi', 'CSS0022306' => 'camsi', 'CSS0030591' => 'camsi', 'CSS0030696' => 'camsi', 'CSS0032653' => 'camsi', 'CSS0037487' => 'camsi', 'CSS0041102' => 'camsi', 'CSS0041261' => 'camsi', 'CSS0046246' => 'camsi', 'CSS0049256' => 'camsi', 'DCAR_004075' => 'dca', 'DCAR_011538' => 'dca', 'DCAR_019553' => 'dca', 'DCAR_020952' => 'dca', 'DCAR_021739' => 'dca', 'DCAR_027407' => 'dca', 'DCAR_027913' => 'dca', 'DCAR_028066' => 'dca', 'Dinv05899' => 'din', 'Dinv07563' => 'din', 'Dinv08010' => 'din', 'Dinv14125' => 'din', 'Dinv20172' => 'din', 'Dinv30743' => 'din', 'Dinv31229' => 'din', 'Dinv34162' => 'din', 'Dinv36028' => 'din', 'Dinv39368' => 'din', 'Dinv40565' => 'din', 'Dinv41706' => 'din', 'Duzib052G0089' => 'dzi', 'Duzib116G0641' => 'dzi', 'Duzib132G0069' => 'dzi', 'Duzib132G1219' => 'dzi', 'Duzib147G0278' => 'dzi', 'Duzib160G0480' => 'dzi', 'Duzib170G0661' => 'dzi', 'Duzib177G0591' => 'dzi', 'Duzib187G1353' => 'dzi', 'Duzib192G0858' => 'dzi', 'Duzib192G0883' => 'dzi', 'Duzib213G0506' => 'dzi', 'Duzib235G0289' => 'dzi', 'Duzib251G0422' => 'dzi', 'ECA232G3898' => 'eca', 'ECA233G5950' => 'eca', 'ECA234G1699' => 'eca', 'ECA234G2421' => 'eca', 'ECA236G0426' => 'eca', 'ECA236G4331' => 'eca', 'ECA248G2573' => 'eca', 'EL10Ac1g00077' => 'bvu', 'EL10Ac1g01746' => 'bvu', 'EL10Ac2g03464' => 'bvu', 'EL10Ac4g08176' => 'bvu', 'EL10Ac7g17521' => 'bvu', 'EL10Ac8g20386' => 'bvu', 'EL10Ac9g21343' => 'bvu', 'EL10Ac9g22688' => 'bvu', 'Eucgr.B03434' => 'egr', 'Eucgr.D00618' => 'egr', 'Eucgr.E02395' => 'egr', 'Eucgr.F01129' => 'egr', 'Eucgr.F02622' => 'egr', 'Eucgr.F04207' => 'egr', 'FAN01G0570' => 'fan', 'FAN03G3351' => 'fan', 'FAN06G3702' => 'fan', 'FAN07G2149' => 'fan', 'FAN10G3758' => 'fan', 'FAN11G1170' => 'fan', 'FAN11G2050' => 'fan', 'FAN11G2724' => 'fan', 'FAN12G1700' => 'fan', 'FAN12G2028' => 'fan', 'FAN15G1160' => 'fan', 'FAN15G3063' => 'fan', 'FAN16G2540' => 'fan', 'FAN16G3077' => 'fan', 'FAN16G3624' => 'fan', 'FAN17G0221' => 'fan', 'FAN20G2492' => 'fan', 'FAN20G2905' => 'fan', 'FAN21G0548' => 'fan', 'FAN21G1300' => 'fan', 'FAN22G0077' => 'fan', 'FAN22G1315' => 'fan', 'FAN24G1280' => 'fan', 'FAN24G1445' => 'fan', 'FAN24G3527' => 'fan', 'FAN25G0464' => 'fan', 'FAN25G2885' => 'fan', 'FAN25G3270' => 'fan', 'FAN27G1101' => 'fan', 'FAN27G2846' => 'fan', 'FAN27G3524' => 'fan', 'FvH4_2g11770' => 'fve', 'FvH4_2g15630' => 'fve', 'FvH4_3g05570' => 'fve', 'FvH4_3g09110' => 'fve', 'FvH4_3g19940' => 'fve', 'FvH4_4g04821' => 'fve', 'FvH4_4g31480' => 'fve', 'FvH4_7g01740' => 'fve', 'Glyma.05G130400' => 'gma', 'Glyma.05G156400' => 'gma', 'Glyma.07G197000' => 'gma', 'Glyma.08G085151' => 'gma', 'Glyma.08G114500' => 'gma', 'Glyma.08G300400' => 'gma', 'Glyma.10G215800' => 'gma', 'Glyma.12G224400' => 'gma', 'Glyma.13G179300' => 'gma', 'Glyma.13G218151' => 'gma', 'Glyma.13G238800' => 'gma', 'Glyma.13G276900' => 'gma', 'Glyma.14G078200' => 'gma', 'Glyma.15G074500' => 'gma', 'Glyma.15G094100' => 'gma', 'Glyma.17G247200' => 'gma', 'Glyma.18G120100' => 'gma', 'Glyma.20G176000' => 'gma', 'Gohir.A01G063600' => 'ghi', 'Gohir.A01G170301' => 'ghi', 'Gohir.A02G060500' => 'ghi', 'Gohir.A05G133850' => 'ghi', 'Gohir.A05G161400' => 'ghi', 'Gohir.A06G012900' => 'ghi', 'Gohir.A06G035901' => 'ghi', 'Gohir.A06G127100' => 'ghi', 'Gohir.A06G210500' => 'ghi', 'Gohir.A08G008650' => 'ghi', 'Gohir.A09G072700' => 'ghi', 'Gohir.A09G088301' => 'ghi', 'Gohir.A10G040600' => 'ghi', 'Gohir.A12G036300' => 'ghi', 'Gohir.A12G143350' => 'ghi', 'Gohir.A12G165500' => 'ghi', 'Gohir.A13G145700' => 'ghi', 'Gohir.D01G050000' => 'ghi', 'Gohir.D01G051366' => 'ghi', 'Gohir.D01G161350' => 'ghi', 'Gohir.D02G065900' => 'ghi', 'Gohir.D05G164200' => 'ghi', 'Gohir.D05G355500' => 'ghi', 'Gohir.D06G010400' => 'ghi', 'Gohir.D06G111250' => 'ghi', 'Gohir.D06G132000' => 'ghi', 'Gohir.D06G210500' => 'ghi', 'Gohir.D07G165675' => 'ghi', 'Gohir.D08G062240' => 'ghi', 'Gohir.D08G086101' => 'ghi', 'Gohir.D08G138060' => 'ghi', 'Gohir.D09G072300' => 'ghi', 'Gohir.D10G041400' => 'ghi', 'Gohir.D11G191020' => 'ghi', 'Gohir.D11G212066' => 'ghi', 'Gohir.D12G036300' => 'ghi', 'Gohir.D12G168600' => 'ghi', 'Gohir.D13G150600' => 'ghi', 'Gorai.001G057300' => 'gra', 'Gorai.002G069900' => 'gra', 'Gorai.002G200000' => 'gra', 'Gorai.003G067600' => 'gra', 'Gorai.005G074800' => 'gra', 'Gorai.006G087300' => 'gra', 'Gorai.008G037500' => 'gra', 'Gorai.008G181400' => 'gra', 'Gorai.009G169400' => 'gra', 'Gorai.009G387900' => 'gra', 'Gorai.010G013300' => 'gra', 'Gorai.010G153800' => 'gra', 'Gorai.010G255800' => 'gra', 'Gorai.011G043700' => 'gra', 'Gorai.011G198900' => 'gra', 'Gorai.013G168400' => 'gra', 'GSVIVG01005212001' => 'vvi', 'GSVIVG01006163001' => 'vvi', 'GSVIVG01009625001' => 'vvi', 'GSVIVG01014338001' => 'vvi', 'GSVIVG01020005001' => 'vvi', 'GSVIVG01021450001' => 'vvi', 'GSVIVG01023975001' => 'vvi', 'GSVIVG01034490001' => 'vvi', 'HanXRQChr04g0112071' => 'han', 'HanXRQChr05g0131151' => 'han', 'HanXRQChr09g0262371' => 'han', 'HanXRQChr09g0268401' => 'han', 'HanXRQChr10g0279241' => 'han', 'HanXRQChr10g0297961' => 'han', 'HanXRQChr11g0326231' => 'han', 'HanXRQChr11g0328471' => 'han', 'HanXRQChr16g0507941' => 'han', 'HanXRQChr17g0560211' => 'han', 'Haze_02108' => 'cav', 'Haze_02428' => 'cav', 'Haze_05593' => 'cav', 'Haze_06448' => 'cav', 'Haze_09427' => 'cav', 'Haze_12022' => 'cav', 'Haze_17612' => 'cav', 'Haze_17928' => 'cav', 'Hma1.2p1_0032F.1_g019250' => 'hma', 'Hma1.2p1_0163F.1_g072690' => 'hma', 'Hma1.2p1_0265F.1_g106710' => 'hma', 'Hma1.2p1_0286F.1_g113970' => 'hma', 'Hma1.2p1_0363F.1_g136640' => 'hma', 'Hma1.2p1_0584F.1_g183470' => 'hma', 'Hma1.2p1_0885F.1_g232570' => 'hma', 'HPP92_006022' => 'vpl', 'HPP92_007320' => 'vpl', 'HPP92_011521' => 'vpl', 'HPP92_019387' => 'vpl', 'HPP92_024038' => 'vpl', 'Hund05891' => 'sun', 'Hund06450' => 'sun', 'Hund12053' => 'sun', 'Hund16800' => 'sun', 'Hund21222' => 'sun', 'Hund22896' => 'sun', 'Hund23746' => 'sun', 'Hund27083' => 'sun', 'Lalb_Chr02g0141831' => 'lal', 'Lalb_Chr02g0141841' => 'lal', 'Lalb_Chr05g0220411' => 'lal', 'Lalb_Chr06g0162081' => 'lal', 'Lalb_Chr09g0327651' => 'lal', 'Lalb_Chr13g0295051' => 'lal', 'Lalb_Chr15g0086801' => 'lal', 'Lalb_Chr16g0383781' => 'lal', 'Lalb_Chr16g0383791' => 'lal', 'Lalb_Chr18g0055441' => 'lal', 'Lalb_Chr18g0059611' => 'lal', 'Lalb_Chr20g0109661' => 'lal', 'Lalb_Chr20g0109831' => 'lal', 'Lalb_Chr20g0121871' => 'lal', 'Lalb_Chr22g0355361' => 'lal', 'Lalb_Chr25g0286371' => 'lal', 'Lj1A1187G43' => 'lonja', 'Lj1A1205T50' => 'lonja', 'Lj1A800G33' => 'lonja', 'Lj1C1187T7' => 'lonja', 'Lj1C843T11' => 'lonja', 'Lj1g0010940' => 'lja', 'Lj2A288T69' => 'lonja', 'Lj3g0024276' => 'lja', 'Lj4A47T76' => 'lonja', 'Lj4g0005805' => 'lja', 'Lj4g0006097' => 'lja', 'Lj4g0008528' => 'lja', 'Lj4g0024907' => 'lja', 'Lj5g0012472' => 'lja', 'Lj5g0018648' => 'lja', 'Lj6C789G1' => 'lonja', 'Lj6g0004000' => 'lja', 'Lj7A292G67' => 'lonja', 'Lj7A292T64' => 'lonja', 'Lj9A400T58' => 'lonja', 'Lsat_1_v5_gn_1_126181' => 'lsa', 'Lsat_1_v5_gn_4_123041' => 'lsa', 'Lsat_1_v5_gn_4_133620' => 'lsa', 'Lsat_1_v5_gn_4_53221' => 'lsa', 'Lsat_1_v5_gn_4_71961' => 'lsa', 'Lsat_1_v5_gn_7_105241' => 'lsa', 'Lsat_1_v5_gn_7_21361' => 'lsa', 'Lsat_1_v5_gn_7_28860' => 'lsa', 'Lsat_1_v5_gn_7_31260' => 'lsa', 'Lsat_1_v5_gn_8_52801' => 'lsa', 'Manes.02G191400' => 'mes', 'Manes.03G110100' => 'mes', 'Manes.04G071100' => 'mes', 'Manes.05G100500' => 'mes', 'Manes.05G164700' => 'mes', 'Manes.15G087000' => 'mes', 'Manes.15G121500' => 'mes', 'Manes.16G028300' => 'mes', 'Manes.17G046100' => 'mes', 'Manes.17G069800' => 'mes', 'Manes.18G100500' => 'mes', 'Mapoly0002s0109' => 'mpo', 'Mapoly0024s0007' => 'mpo', 'Mapoly0089s0032' => 'mpo', 'MBI04_g42241_MAGBIO' => 'mbi', 'MBI05_g11988_MAGBIO' => 'mbi', 'MBI05_g35452_MAGBIO' => 'mbi', 'MBI07_g30179_MAGBIO' => 'mbi', 'MBI07_g35859_MAGBIO' => 'mbi', 'MBI07_g35860_MAGBIO' => 'mbi', 'MBI07_g37166_MAGBIO' => 'mbi', 'MBI08_g18172_MAGBIO' => 'mbi', 'MBI09_g08441_MAGBIO' => 'mbi', 'MBI13_g01676_MAGBIO' => 'mbi', 'MBI14_g42955_MAGBIO' => 'mbi', 'MBI16_g13161_MAGBIO' => 'mbi', 'MBI17_g27204_MAGBIO' => 'mbi', 'MBI19_g21595_MAGBIO' => 'mbi', 'MD00G1148400' => 'mdo', 'MD02G1301200' => 'mdo', 'MD03G1227800' => 'mdo', 'MD05G1041100' => 'mdo', 'MD05G1124800' => 'mdo', 'MD05G1284000' => 'mdo', 'MD05G1338800' => 'mdo', 'MD05G1338900' => 'mdo', 'MD07G1022800' => 'mdo', 'MD10G1047500' => 'mdo', 'MD10G1127500' => 'mdo', 'MD10G1262300' => 'mdo', 'MD10G1293800' => 'mdo', 'MD16G1074300' => 'mdo', 'Medtr1g021670' => 'mtr', 'Medtr1g096320' => 'mtr', 'Medtr2g013690' => 'mtr', 'Medtr2g019450' => 'mtr', 'Medtr2g085170' => 'mtr', 'Medtr4g088785' => 'mtr', 'Medtr8g055930' => 'mtr', 'Medtr8g085850' => 'mtr', 'MELO3C002605.2' => 'cme', 'MELO3C003891.2' => 'cme', 'MELO3C004012.2' => 'cme', 'MELO3C007134.2' => 'cme', 'MELO3C008118.2' => 'cme', 'MELO3C016700.2' => 'cme', 'MELO3C024127.2' => 'cme', 'MELO3C033361.2' => 'cme', 'MELO3C033362.2' => 'cme', 'Migut.C00430' => 'egut', 'Migut.C01246' => 'egut', 'Migut.E00101' => 'egut', 'Migut.H01486' => 'egut', 'Migut.H01939' => 'egut', 'Migut.K00360' => 'egut', 'Migut.M00910' => 'egut', 'Migut.M01139' => 'egut', 'Migut.N02677' => 'egut', 'MSTRG.13252' => 'ama', 'MSTRG.14701' => 'ama', 'MSTRG.1521' => 'ama', 'MSTRG.15884' => 'ama', 'MSTRG.16242' => 'ama', 'MSTRG.22285' => 'ama', 'MSTRG.22444' => 'ama', 'MSTRG.2349' => 'ama', 'MSTRG.26308' => 'ama', 'MSTRG.28296' => 'ama', 'MSTRG.9895' => 'ama', 'Nitab4.5_0000110g0060' => 'nta', 'Nitab4.5_0000420g0130' => 'nta', 'Nitab4.5_0000422g0030' => 'nta', 'Nitab4.5_0000560g0180' => 'nta', 'Nitab4.5_0000703g0100' => 'nta', 'Nitab4.5_0000786g0200' => 'nta', 'Nitab4.5_0001336g0020' => 'nta', 'Nitab4.5_0001796g0030' => 'nta', 'Nitab4.5_0003348g0060' => 'nta', 'Nitab4.5_0003698g0040' => 'nta', 'Nitab4.5_0003942g0090' => 'nta', 'Nitab4.5_0004775g0070' => 'nta', 'Nitab4.5_0004864g0030' => 'nta', 'Nitab4.5_0005615g0020' => 'nta', 'Nitab4.5_0009288g0030' => 'nta', 'Nitab4.5_0009341g0010' => 'nta', 'Nitab4.5_0009535g0010' => 'nta', 'Nn1g03995' => 'nnu', 'Nn1g04100' => 'nnu', 'Nn1g06530' => 'nnu', 'Nn3g16404' => 'nnu', 'Nn3g17212' => 'nnu', 'Nn3g20776' => 'nnu', 'Nn3g21923' => 'nnu', 'Nn5g27737' => 'nnu', 'Nn5g29461' => 'nnu', 'Nn7g38355' => 'nnu', 'Nn8g39873' => 'nnu', 'Oeu000548.2' => 'oeu', 'Oeu004672.1' => 'oeu', 'Oeu015605.2' => 'oeu', 'Oeu016092.1' => 'oeu', 'Oeu017879.3' => 'oeu', 'Oeu024910.1' => 'oeu', 'Oeu028965.1' => 'oeu', 'Oeu031269.1' => 'oeu', 'Oeu031270.1' => 'oeu', 'Oeu032535.1' => 'oeu', 'Oeu034151.1' => 'oeu', 'Oeu034152.1' => 'oeu', 'Oeu034588.2' => 'oeu', 'Oeu050846.1' => 'oeu', 'Oeu050849.2' => 'oeu', 'Oeu051063.2' => 'oeu', 'Oeu052368.1' => 'oeu', 'Oeu052370.1' => 'oeu', 'Os01g0210400' => 'osa', 'Os01g0304300' => 'osa', 'Os01g0749100' => 'osa', 'Os02g0745800' => 'osa', 'Os03g0769050' => 'osa', 'Os05g0531500' => 'osa', 'Os06g0724300' => 'osa', 'Os11g0198100' => 'osa', 'Peaxi162Scf00069g01425' => 'pax', 'Peaxi162Scf00280g00811' => 'pax', 'Peaxi162Scf00310g00615' => 'pax', 'Peaxi162Scf00362g00542' => 'pax', 'Peaxi162Scf00461g00310' => 'pax', 'Peaxi162Scf00530g00118' => 'pax', 'Peaxi162Scf00541g00057' => 'pax', 'Peaxi162Scf00661g00017' => 'pax', 'Peaxi162Scf00926g00027' => 'pax', 'Peaxi162Scf01064g00263' => 'pax', 'Peaxi162Scf01211g00135' => 'pax', 'PGR004G2336' => 'pgr', 'PGR042G0327' => 'pgr', 'PGR042G1957' => 'pgr', 'PGR042G2003' => 'pgr', 'PGR042G3929' => 'pgr', 'PGR083G1137' => 'pgr', 'PGR083G1364' => 'pgr', 'PGSC0003DMG400003381' => 'stu', 'PGSC0003DMG400003417' => 'stu', 'PGSC0003DMG400008981' => 'stu', 'PGSC0003DMG400012417' => 'stu', 'PGSC0003DMG400012823' => 'stu', 'PGSC0003DMG400016885' => 'stu', 'PGSC0003DMG400022812' => 'stu', 'PGSC0003DMG400029726' => 'stu', 'PGSC0003DMG401009243' => 'stu', 'PGSC0003DMG401031505' => 'stu', 'PGSC0003DMG402031505' => 'stu', 'Phvul.001G017600' => 'pvu', 'Phvul.002G193500' => 'pvu', 'Phvul.002G228900' => 'pvu', 'Phvul.002G236800' => 'pvu', 'Phvul.003G049500' => 'pvu', 'Phvul.005G072000' => 'pvu', 'Phvul.006G164800' => 'pvu', 'Phvul.006G185100' => 'pvu', 'Phvul.007G090000' => 'pvu', 'Potri.001G399800' => 'ptr', 'Potri.002G149900' => 'ptr', 'Potri.004G044100' => 'ptr', 'Potri.004G177600' => 'ptr', 'Potri.009G138000' => 'ptr', 'Potri.010G094000' => 'ptr', 'Potri.011G053000' => 'ptr', 'Potri.011G119300' => 'ptr', 'Potri.013G113700' => 'ptr', 'Potri.018G107800' => 'ptr', 'Potri.019G084100' => 'ptr', 'Pp3c14_23720' => 'ppa', 'Pp3c16_6340' => 'ppa', 'Pp3c23_13420' => 'ppa', 'Pp3c24_2740' => 'ppa', 'Pp3c25_860' => 'ppa', 'Pp3c8_21750' => 'ppa', 'Prupe.1G273000' => 'ppe', 'Prupe.1G273700' => 'ppe', 'Prupe.1G274100' => 'ppe', 'Prupe.2G023300' => 'ppe', 'Prupe.4G048000' => 'ppe', 'Prupe.4G080400' => 'ppe', 'Prupe.4G181200' => 'ppe', 'Prupe.8G056900' => 'ppe', 'Prupe.8G168700' => 'ppe', 'Psat1g189080' => 'psa', 'Psat1g204760' => 'psa', 'Psat4g175560' => 'psa', 'Psat4g177720' => 'psa', 'Psat5g244240' => 'psa', 'Psat6g010720' => 'psa', 'Psat6g187200' => 'psa', 'Psat7g072040' => 'psa', 'PSO017G3501' => 'pso', 'PSO063G2148' => 'pso', 'PSO063G5608' => 'pso', 'PSO210G6392' => 'pso', 'PSO541G2319' => 'pso', 'PSO541G2836' => 'pso', 'PSO541G4012' => 'pso', 'PSO541G6253' => 'pso', 'PSO675G0580' => 'pso', 'PSO675G0856' => 'pso', 'PSO675G5635' => 'pso', 'PSO675G9157' => 'pso', 'PSO832G1660' => 'pso', 'PSO832G1969' => 'pso', 'QL02p007186' => 'qlo', 'QL02p033904' => 'qlo', 'QL03p064391' => 'qlo', 'QL05p040593' => 'qlo', 'QL05p058242' => 'qlo', 'QL08p021825' => 'qlo', 'QL11p004981' => 'qlo', 'RcHm_v2.0_Chr1g0318301' => 'rch', 'RcHm_v2.0_Chr4g0418501' => 'rch', 'RcHm_v2.0_Chr4g0439971' => 'rch', 'RcHm_v2.0_Chr5g0008541' => 'rch', 'RcHm_v2.0_Chr5g0014101' => 'rch', 'RcHm_v2.0_Chr5g0014131' => 'rch', 'RcHm_v2.0_Chr5g0033621' => 'rch', 'RcHm_v2.0_Chr6g0272041' => 'rch', 'RcHm_v2.0_Chr6g0278831' => 'rch', 'Rhsim02G0130400' => 'rsi', 'Rhsim02G0171100' => 'rsi', 'Rhsim05G0053000' => 'rsi', 'Rhsim05G0053100' => 'rsi', 'Rhsim06G0096500' => 'rsi', 'Rhsim06G0096600' => 'rsi', 'Rhsim06G0199100' => 'rsi', 'Rhsim12G0062300' => 'rsi', 'Rhsim12G0062800' => 'rsi', 'Sabra02G0118600' => 'sbr', 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'Solyc03g079860.2' => 'sly', 'Solyc04g079770.3' => 'sly', 'Solyc05g007430.4' => 'sly', 'Solyc07g063150.3' => 'sly', 'Solyc08g016620.3' => 'sly', 'Solyc09g057590.3' => 'sly', 'Solyc09g057600.1' => 'sly', 'Solyc10g009050.3' => 'sly', 'Solyc11g017420.2' => 'sly', 'Sopen01g053810' => 'spe', 'Sopen02g023040' => 'spe', 'Sopen03g002440' => 'spe', 'Sopen04g033350' => 'spe', 'Sopen05g003310' => 'spe', 'Sopen07g004050' => 'spe', 'Sopen07g031340' => 'spe', 'Sopen08g006990' => 'spe', 'Sopen10g004830' => 'spe', 'Sopen11g009370' => 'spe', 'Sp1g24450' => 'spa', 'Sp1g29670' => 'spa', 'Sp1g39600' => 'spa', 'Sp2g11080' => 'spa', 'Sp2g13970' => 'spa', 'Sp4g16130' => 'spa', 'Sp6g13080' => 'spa', 'Sp7g37270' => 'spa', 'TAR371G0065' => 'tar', 'TAR376G0340' => 'tar', 'TAR376G0435' => 'tar', 'TAR381G0002' => 'tar', 'TAR381G1236' => 'tar', 'TAR624G0055' => 'tar', 'TAR624G0324' => 'tar', 'TAR624G0696' => 'tar', 'TAR624G0906' => 'tar', 'TAR625G0107' => 'tar', 'TAR626G0015' => 'tar', 'TAR626G1356' => 'tar', 'TAR627G0888' => 'tar', 'TAR628G0399' => 'tar', 'TAR628G1327' => 'tar', 'TAR629G2831' => 'tar', 'TAR629G2874' => 'tar', 'TAR633G1432' => 'tar', 'TAR633G2771' => 'tar', 'THA.LOC104803394' => 'tha', 'THA.LOC104805153' => 'tha', 'THA.LOC104806784' => 'tha', 'THA.LOC104810473' => 'tha', 'THA.LOC104813100' => 'tha', 'THA.LOC104814215' => 'tha', 'THA.LOC104815554' => 'tha', 'THA.LOC104820544' => 'tha', 'THA.LOC104824754' => 'tha', 'THA.LOC104827717' => 'tha', 'Thecc.02G031400' => 'tca', 'Thecc.02G055900' => 'tca', 'Thecc.02G350800' => 'tca', 'Thecc.06G150900' => 'tca', 'Thecc.06G186600' => 'tca', 'Thecc.07G089600' => 'tca', 'Thecc.08G020400' => 'tca', 'Thecc.08G182100' => 'tca', 'Thhalv10000873m.g' => 'esa', 'Thhalv10004185m.g' => 'esa', 'Thhalv10006981m.g' => 'esa', 'Thhalv10007204m.g' => 'esa', 'Thhalv10011374m.g' => 'esa', 'Thhalv10013482m.g' => 'esa', 'Thhalv10017801m.g' => 'esa', 'Thhalv10024983m.g' => 'esa', 'TPR.G12072' => 'tpr', 'TPR.G15769' => 'tpr', 'TPR.G16504' => 'tpr', 'TPR.G16506' => 'tpr', 'TPR.G24345' => 'tpr', 'TPR.G26666' => 'tpr', 'TPR.G27320' => 'tpr', 'TPR.G31819' => 'tpr', 'TPR.G38879' => 'tpr', 'TPR.G39015' => 'tpr', 'TPR.G8819' => 'tpr', 'TWI09G0924' => 'twi', 'TWI12G0811' => 'twi', 'TWI12G1294' => 'twi', 'TWI31G0150' => 'twi', 'TWI36G1262' => 'twi', 'TWI38G1287' => 'twi', 'TWI38G1633' => 'twi', 'TWI38G1982' => 'twi', 'TWI39G0116' => 'twi', 'TWI60G1011' => 'twi', 'TWI63G0171' => 'twi', 'TWI73G0839' => 'twi', 'TWI79G1511' => 'twi', 'unitig_0.g915' => 'ugi', 'unitig_0.g916' => 'ugi', 'unitig_21.g20219' => 'ugi', 'unitig_21.g20416' => 'ugi', 'unitig_578.g16132' => 'ugi', 'unitig_578.g16718' => 'ugi', 'unitig_62.g23481' => 'ugi', 'unitig_744.g24535' => 'ugi', 'unitig_749.g13525' => 'ugi', 'vmacro01248' => 'vma', 'vmacro02290' => 'vma', 'vmacro10946' => 'vma', 'vmacro11865' => 'vma', 'vmacro12493' => 'vma', 'vmacro17322' => 'vma', 'vmacro21599' => 'vma', 'vmacro23041' => 'vma', 'VMungo0251G0004' => 'vmu', 'VMungo0251G2639' => 'vmu', 'VMungo0251G2967' => 'vmu', 'VMungo0540G0864' => 'vmu', 'VMungo0540G1569' => 'vmu', 'VMungo0647G0317' => 'vmu', 'VMungo0720G1373' => 'vmu', 'VMungo0720G1508' => 'vmu', 'VMungo1080G0485' => 'vmu', 'VMungo1215G3177' => 'vmu', 'Zm00001eb112600' => 'zma', 'Zm00001eb120220' => 'zma', 'Zm00001eb153240' => 'zma', 'Zm00001eb168880' => 'zma', 'Zm00001eb213920' => 'zma', 'Zm00001eb228280' => 'zma', 'Zm00001eb254580' => 'zma', 'Zm00001eb272180' => 'zma', 'Zm00001eb293190' => 'zma', 'Zm00001eb322930' => 'zma', 'Zm00001eb353360' => 'zma', 'Zm00001eb353390' => 'zma', 'Zm00001eb353430' => 'zma', 'Zm00001eb353440' => 'zma', 'Zm00001eb353780' => 'zma' ), 'gf_id' => 'HOM05D000499', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000499' ), 'data_identifier' => 'HOM05D000499', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000499', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1066', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p29780' => 'bna', 'A02p33180' => 'bna', 'A03p16470' => 'bna', 'A03p66010' => 'bna', 'A04p25970' => 'bna', 'A06p01270' => 'bna', 'A06p46080' => 'bna', 'A07p11400' => 'bna', 'A08p01840' => 'bna', 'A08p08230' => 'bna', 'A08p25740' => 'bna', 'A09p32070' => 'bna', 'A09p37830' => 'bna', 'A09p42840' => 'bna', 'A09p42850' => 'bna', 'Aa31LG10G2060' => 'aar', 'Aa31LG2G7410' => 'aar', 'Aa31LG6G10200' => 'aar', 'Aa31LG6G16680' => 'aar', 'Aa31LG6G8470' => 'aar', 'Aa31LG9G12730' => 'aar', 'Aa31LG9G13680' => 'aar', 'Aa31LG9G14920' => 'aar', 'Aa31LG9G6650' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4977' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5467' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3254' => 'aag', 'Actinidia02578' => 'ach', 'Actinidia07693' => 'ach', 'Actinidia08413' => 'ach', 'Actinidia08414' => 'ach', 'Actinidia15289' => 'ach', 'Actinidia19871' => 'ach', 'Actinidia21475' => 'ach', 'Actinidia22576' => 'ach', 'Actinidia28327' => 'ach', 'Actinidia32491' => 'ach', 'Actinidia39463' => 'ach', 'Actinidia39571' => 'ach', 'Ah.01g013750' => 'amhyb', 'Ah.01g023210' => 'amhyb', 'Ah.04g164850' => 'amhyb', 'Ah.05g178060' => 'amhyb', 'Ah.07g204270' => 'amhyb', 'Ah.07g208480' => 'amhyb', 'Ah.09g237410' => 'amhyb', 'Ah.14g089460' => 'amhyb', 'AL1G41790' => 'aly', 'AL1G49050' => 'aly', 'AL1G53810' => 'aly', 'AL1G61400' => 'aly', 'AL4G18580' => 'aly', 'AL5G12510' => 'aly', 'AL5G12540' => 'aly', 'AL6G43230' => 'aly', 'AL7G10370' => 'aly', 'AL7G19250' => 'aly', 'AL8G12240' => 'aly', 'AL8G18540' => 'aly', 'Aqoxy1G02409' => 'aox', 'Aqoxy2G03993' => 'aox', 'Aqoxy3G03357' => 'aox', 'Aqoxy4G00785' => 'aox', 'Aqoxy5G02598' => 'aox', 'Aqoxy6G00132' => 'aox', 'Aqoxy7G01776' => 'aox', 'Aqoxy7G02316' => 'aox', 'Aqoxy7G03973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.12AFKW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B8730' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27IQR1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3F75VG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3RE0GA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41TCQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.527VTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FIR39' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5W8UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DA38EV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ63HS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H1I32C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HC27T5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4M8AP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7N3CZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9UVDZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LS1NQA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT1D4B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SKC4TM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCFV76' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF9Q1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQWD9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1ZM88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WE07RT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YCK7VH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJE6Q6' => 'arhy', 'AT1G28240' => 'ath', 'AT1G34550' => 'ath', 'AT1G53040' => 'ath', 'AT2G02910' => 'ath', 'AT4G09630' => 'ath', 'AT4G38500' => 'ath', 'AT5G42660' => 'ath', 'AT5G46220' => 'ath', 'ATR0152G026' => 'atr', 'ATR0564G343' => 'atr', 'ATR0706G151' => 'atr', 'ATR0733G207' => 'atr', 'ATR0751G234' => 'atr', 'ATR0807G048' => 'atr', 'ATR1091G084' => 'atr', 'Atru.chr10.1229' => 'acertr', 'Atru.chr10.1230' => 'acertr', 'Atru.chr10.1874' => 'acertr', 'Atru.chr11.1808' => 'acertr', 'Atru.chr13.1795' => 'acertr', 'Atru.chr13.570' => 'acertr', 'Atru.chr2.2608' => 'acertr', 'Atru.chr2.2609' => 'acertr', 'Atru.chr5.3428' => 'acertr', 'Atru.chr8.1171' => 'acertr', 'AUR62004651' => 'cqu', 'AUR62008675' => 'cqu', 'AUR62010014' => 'cqu', 'AUR62013004' => 'cqu', 'AUR62014825' => 'cqu', 'AUR62015015' => 'cqu', 'AUR62015151' => 'cqu', 'AUR62017020' => 'cqu', 'AUR62019422' => 'cqu', 'AUR62023570' => 'cqu', 'AUR62025571' => 'cqu', 'AUR62029098' => 'cqu', 'AUR62033863' => 'cqu', 'AUR62034296' => 'cqu', 'AUR62040075' => 'cqu', 'BcaB02g07334' => 'bca', 'BcaB02g10575' => 'bca', 'BcaB03g12119' => 'bca', 'BcaB03g12120' => 'bca', 'BcaB03g13945' => 'bca', 'BcaB04g17123' => 'bca', 'BcaB04g17867' => 'bca', 'BcaB04g19839' => 'bca', 'BcaB07g30317' => 'bca', 'BcaB07g32432' => 'bca', 'BcaB07g33362' => 'bca', 'BcaB08g36611' => 'bca', 'BcaC01g00028' => 'bca', 'BcaC01g01356' => 'bca', 'BcaC01g02034' => 'bca', 'BcaC01g06051' => 'bca', 'BcaC03g16839' => 'bca', 'BcaC03g17176' => 'bca', 'BcaC05g26829' => 'bca', 'BcaC06g31490' => 'bca', 'BcaC06g35344' => 'bca', 'BcaC06g36570' => 'bca', 'BcaC07g37537' => 'bca', 'BcaC08g43491' => 'bca', 'BcaC08g43773' => 'bca', 'BcaNung00234' => 'bca', 'BcaNung01982' => 'bca', 'BcaNung03707' => 'bca', 'BcaNung06454' => 'bca', 'BolC2t10762H' => 'bol', 'BolC2t11191H' => 'bol', 'BolC3t14322H' => 'bol', 'BolC3t19747H' => 'bol', 'BolC3t21425H' => 'bol', 'BolC4t27800H' => 'bol', 'BolC5t31423H' => 'bol', 'BolC6t35951H' => 'bol', 'BolC6t36282H' => 'bol', 'BolC7t40678H' => 'bol', 'BolC7t40679H' => 'bol', 'BolC7t42222H' => 'bol', 'BolC7t43492H' => 'bol', 'BolC7t46785H' => 'bol', 'BolC8t47853H' => 'bol', 'BolC9t56805H' => 'bol', 'BraA02t08000Z' => 'bra', 'BraA02t08341Z' => 'bra', 'BraA03t10936Z' => 'bra', 'BraA03t15657Z' => 'bra', 'BraA04t18100Z' => 'bra', 'BraA05t20523Z' => 'bra', 'BraA06t23353Z' => 'bra', 'BraA06t27473Z' => 'bra', 'BraA06t27769Z' => 'bra', 'BraA07t28928Z' => 'bra', 'BraA08t32236Z' => 'bra', 'BraA08t32841Z' => 'bra', 'BraA08t34524Z' => 'bra', 'BraA09t38742Z' => 'bra', 'BraA09t39295Z' => 'bra', 'C02p47180' => 'bna', 'C02p50990' => 'bna', 'C03p19360' => 'bna', 'C03p74950' => 'bna', 'C03p91000' => 'bna', 'C04p63260' => 'bna', 'C05p27050' => 'bna', 'C06p08750' => 'bna', 'C06p11490' => 'bna', 'C07p02820' => 'bna', 'C07p17180' => 'bna', 'C07p29440' => 'bna', 'C07p63730' => 'bna', 'C09p39260' => 'bna', 'CAN.G1164.34' => 'can', 'CAN.G1164.39' => 'can', 'CAN.G1530.3' => 'can', 'CAN.G162.61' => 'can', 'CAN.G176.6' => 'can', 'CAN.G289.49' => 'can', 'CAN.G370.21' => 'can', 'CAN.G370.22' => 'can', 'CAN.G371.117' => 'can', 'CAN.G58.37' => 'can', 'CAN.G588.98' => 'can', 'CANSAT21G2266' => 'cansat', 'CANSAT25G2799' => 'cansat', 'CANSAT35G0862' => 'cansat', 'CANSAT35G1704' => 'cansat', 'CANSAT35G1760' => 'cansat', 'CANSAT56G3971' => 'cansat', 'CANSAT56G4116' => 'cansat', 'CANSAT80G1259' => 'cansat', 'CARHR027730' => 'chi', 'CARHR033880' => 'chi', 'CARHR043270' => 'chi', 'CARHR145330' => 'chi', 'CARHR145340' => 'chi', 'CARHR175570' => 'chi', 'CARHR181570' => 'chi', 'CARHR258470' => 'chi', 'CARHR260490' => 'chi', 'CARHR294220' => 'chi', 'Carub.0001s2668' => 'cru', 'Carub.0001s3257' => 'cru', 'Carub.0001s4220' => 'cru', 'Carub.0005s0179' => 'cru', 'Carub.0006s2807' => 'cru', 'Carub.0007s0039' => 'cru', 'Carub.0008s0169' => 'cru', 'Carub.0008s0636' => 'cru', 'Ca_00338_v3' => 'car', 'Ca_00542_v3' => 'car', 'Ca_01844_v3' => 'car', 'Ca_10611_v3' => 'car', 'Ca_13326_v3' => 'car', 'Ca_17944_v3' => 'car', 'Ca_18546_v3' => 'car', 'Ca_24219_v3' => 'car', 'Ca_29972_v3' => 'car', 'CBR_g3681' => 'cbr', 'CBR_g40021' => 'cbr', 'Cc01_g08140' => 'ccan', 'Cc02_g13410' => 'ccan', 'Cc02_g37480' => 'ccan', 'Cc05_g12030' => 'ccan', 'Cc09_g03370' => 'ccan', 'Cc09_g10300' => 'ccan', 'Cc10_g03530' => 'ccan', 'Cc10_g11380' => 'ccan', 'CDE01G0176' => 'cde', 'CDE02G0675' => 'cde', 'CDE02G0942' => 'cde', 'CDE02G1153' => 'cde', 'CDE02G4177' => 'cde', 'CDE04G2117' => 'cde', 'CDE04G2736' => 'cde', 'CDE08G1161' => 'cde', 'CDE09G1238' => 'cde', 'Cfa000467' => 'cfa', 'Cfa000947' => 'cfa', 'Cfa004969' => 'cfa', 'Cfa005284' => 'cfa', 'Cfa008993' => 'cfa', 'Cfa018187' => 'cfa', 'Cfa018454' => 'cfa', 'Cfa020585' => 'cfa', 'Ciclev10000424m.g' => 'ccl', 'Ciclev10003605m.g' => 'ccl', 'Ciclev10007828m.g' => 'ccl', 'Ciclev10014620m.g' => 'ccl', 'Ciclev10015169m.g' => 'ccl', 'Ciclev10018291m.g' => 'ccl', 'Ciclev10028256m.g' => 'ccl', 'Ciclev10033822m.g' => 'ccl', 'CiPaw.05G060300' => 'cil', 'CiPaw.05G085000' => 'cil', 'CiPaw.06G083700' => 'cil', 'CiPaw.06G120300' => 'cil', 'CiPaw.09G060500' => 'cil', 'CiPaw.09G123800' => 'cil', 'CiPaw.11G169700' => 'cil', 'CiPaw.12G118300' => 'cil', 'CiPaw.15G071000' => 'cil', 'CiPaw.15G081900' => 'cil', 'ClCG01G024610' => 'cla', 'ClCG03G006070' => 'cla', 'ClCG05G019250' => 'cla', 'ClCG09G009500' => 'cla', 'ClCG11G008200' => 'cla', 'ClCG11G018080' => 'cla', 'COL.COLO4_17373' => 'col', 'COL.COLO4_22994' => 'col', 'COL.COLO4_26389' => 'col', 'COL.COLO4_27170' => 'col', 'COL.COLO4_31074' => 'col', 'COL.COLO4_31465' => 'col', 'COL.COLO4_36438' => 'col', 'COL.COLO4_36439' => 'col', 'Cpa.g.c38781' => 'cpa', 'Cpa.g.sc128.12' => 'cpa', 'Cpa.g.sc166.7' => 'cpa', 'Cpa.g.sc166.8' => 'cpa', 'Cpa.g.sc20.111' => 'cpa', 'Cpa.g.sc27.31' => 'cpa', 'Cpa.g.sc64.36' => 'cpa', 'Cpa.g.sc64.37' => 'cpa', 'Cpa.g.sc66.49' => 'cpa', 'Cpa.g.sc80.64' => 'cpa', 'CsaV3_1G012320' => 'csa', 'CsaV3_2G008480' => 'csa', 'CsaV3_2G033450' => 'csa', 'CsaV3_3G044830' => 'csa', 'CsaV3_4G033710' => 'csa', 'CsaV3_6G051730' => 'csa', 'CsaV3_7G025350' => 'csa', 'CSS0001067' => 'camsi', 'CSS0005996' => 'camsi', 'CSS0006590' => 'camsi', 'CSS0009673' => 'camsi', 'CSS0010201' => 'camsi', 'CSS0010549' => 'camsi', 'CSS0011364' => 'camsi', 'CSS0014473' => 'camsi', 'CSS0014961' => 'camsi', 'CSS0020191' => 'camsi', 'CSS0021165' => 'camsi', 'CSS0022306' => 'camsi', 'CSS0030591' => 'camsi', 'CSS0030696' => 'camsi', 'CSS0032653' => 'camsi', 'CSS0037487' => 'camsi', 'CSS0041102' => 'camsi', 'CSS0041261' => 'camsi', 'CSS0046246' => 'camsi', 'CSS0049256' => 'camsi', 'DCAR_004075' => 'dca', 'DCAR_011538' => 'dca', 'DCAR_019553' => 'dca', 'DCAR_020952' => 'dca', 'DCAR_021739' => 'dca', 'DCAR_027407' => 'dca', 'DCAR_027913' => 'dca', 'DCAR_028066' => 'dca', 'Dinv05899' => 'din', 'Dinv07563' => 'din', 'Dinv08010' => 'din', 'Dinv14125' => 'din', 'Dinv20172' => 'din', 'Dinv30743' => 'din', 'Dinv31229' => 'din', 'Dinv34162' => 'din', 'Dinv36028' => 'din', 'Dinv39368' => 'din', 'Dinv40565' => 'din', 'Dinv41706' => 'din', 'Duzib052G0089' => 'dzi', 'Duzib116G0641' => 'dzi', 'Duzib132G0069' => 'dzi', 'Duzib132G1219' => 'dzi', 'Duzib147G0278' => 'dzi', 'Duzib160G0480' => 'dzi', 'Duzib170G0661' => 'dzi', 'Duzib177G0591' => 'dzi', 'Duzib187G1353' => 'dzi', 'Duzib192G0858' => 'dzi', 'Duzib192G0883' => 'dzi', 'Duzib213G0506' => 'dzi', 'Duzib235G0289' => 'dzi', 'Duzib251G0422' => 'dzi', 'ECA232G3898' => 'eca', 'ECA233G5950' => 'eca', 'ECA234G1699' => 'eca', 'ECA234G2421' => 'eca', 'ECA236G0426' => 'eca', 'ECA236G4331' => 'eca', 'ECA248G2573' => 'eca', 'EL10Ac1g00077' => 'bvu', 'EL10Ac1g01746' => 'bvu', 'EL10Ac2g03464' => 'bvu', 'EL10Ac4g08176' => 'bvu', 'EL10Ac7g17521' => 'bvu', 'EL10Ac8g20386' => 'bvu', 'EL10Ac9g21343' => 'bvu', 'EL10Ac9g22688' => 'bvu', 'Eucgr.B03434' => 'egr', 'Eucgr.D00618' => 'egr', 'Eucgr.E02395' => 'egr', 'Eucgr.F01129' => 'egr', 'Eucgr.F02622' => 'egr', 'Eucgr.F04207' => 'egr', 'FAN01G0570' => 'fan', 'FAN03G3351' => 'fan', 'FAN06G3702' => 'fan', 'FAN07G2149' => 'fan', 'FAN10G3758' => 'fan', 'FAN11G1170' => 'fan', 'FAN11G2050' => 'fan', 'FAN11G2724' => 'fan', 'FAN12G1700' => 'fan', 'FAN12G2028' => 'fan', 'FAN15G1160' => 'fan', 'FAN15G3063' => 'fan', 'FAN16G2540' => 'fan', 'FAN16G3077' => 'fan', 'FAN16G3624' => 'fan', 'FAN17G0221' => 'fan', 'FAN20G2492' => 'fan', 'FAN20G2905' => 'fan', 'FAN21G0548' => 'fan', 'FAN21G1300' => 'fan', 'FAN22G0077' => 'fan', 'FAN22G1315' => 'fan', 'FAN24G1280' => 'fan', 'FAN24G1445' => 'fan', 'FAN24G3527' => 'fan', 'FAN25G0464' => 'fan', 'FAN25G2885' => 'fan', 'FAN25G3270' => 'fan', 'FAN27G1101' => 'fan', 'FAN27G2846' => 'fan', 'FAN27G3524' => 'fan', 'FvH4_2g11770' => 'fve', 'FvH4_2g15630' => 'fve', 'FvH4_3g05570' => 'fve', 'FvH4_3g09110' => 'fve', 'FvH4_3g19940' => 'fve', 'FvH4_4g04821' => 'fve', 'FvH4_4g31480' => 'fve', 'FvH4_7g01740' => 'fve', 'Glyma.05G130400' => 'gma', 'Glyma.05G156400' => 'gma', 'Glyma.07G197000' => 'gma', 'Glyma.08G085151' => 'gma', 'Glyma.08G114500' => 'gma', 'Glyma.08G300400' => 'gma', 'Glyma.10G215800' => 'gma', 'Glyma.12G224400' => 'gma', 'Glyma.13G179300' => 'gma', 'Glyma.13G218151' => 'gma', 'Glyma.13G238800' => 'gma', 'Glyma.13G276900' => 'gma', 'Glyma.14G078200' => 'gma', 'Glyma.15G074500' => 'gma', 'Glyma.15G094100' => 'gma', 'Glyma.17G247200' => 'gma', 'Glyma.18G120100' => 'gma', 'Glyma.20G176000' => 'gma', 'Gohir.A01G063600' => 'ghi', 'Gohir.A01G170301' => 'ghi', 'Gohir.A02G060500' => 'ghi', 'Gohir.A05G133850' => 'ghi', 'Gohir.A05G161400' => 'ghi', 'Gohir.A06G012900' => 'ghi', 'Gohir.A06G035901' => 'ghi', 'Gohir.A06G127100' => 'ghi', 'Gohir.A06G210500' => 'ghi', 'Gohir.A08G008650' => 'ghi', 'Gohir.A09G072700' => 'ghi', 'Gohir.A09G088301' => 'ghi', 'Gohir.A10G040600' => 'ghi', 'Gohir.A12G036300' => 'ghi', 'Gohir.A12G143350' => 'ghi', 'Gohir.A12G165500' => 'ghi', 'Gohir.A13G145700' => 'ghi', 'Gohir.D01G050000' => 'ghi', 'Gohir.D01G051366' => 'ghi', 'Gohir.D01G161350' => 'ghi', 'Gohir.D02G065900' => 'ghi', 'Gohir.D05G164200' => 'ghi', 'Gohir.D05G355500' => 'ghi', 'Gohir.D06G010400' => 'ghi', 'Gohir.D06G111250' => 'ghi', 'Gohir.D06G132000' => 'ghi', 'Gohir.D06G210500' => 'ghi', 'Gohir.D07G165675' => 'ghi', 'Gohir.D08G062240' => 'ghi', 'Gohir.D08G086101' => 'ghi', 'Gohir.D08G138060' => 'ghi', 'Gohir.D09G072300' => 'ghi', 'Gohir.D10G041400' => 'ghi', 'Gohir.D11G191020' => 'ghi', 'Gohir.D11G212066' => 'ghi', 'Gohir.D12G036300' => 'ghi', 'Gohir.D12G168600' => 'ghi', 'Gohir.D13G150600' => 'ghi', 'Gorai.001G057300' => 'gra', 'Gorai.002G069900' => 'gra', 'Gorai.002G200000' => 'gra', 'Gorai.003G067600' => 'gra', 'Gorai.005G074800' => 'gra', 'Gorai.006G087300' => 'gra', 'Gorai.008G037500' => 'gra', 'Gorai.008G181400' => 'gra', 'Gorai.009G169400' => 'gra', 'Gorai.009G387900' => 'gra', 'Gorai.010G013300' => 'gra', 'Gorai.010G153800' => 'gra', 'Gorai.010G255800' => 'gra', 'Gorai.011G043700' => 'gra', 'Gorai.011G198900' => 'gra', 'Gorai.013G168400' => 'gra', 'GSVIVG01005212001' => 'vvi', 'GSVIVG01006163001' => 'vvi', 'GSVIVG01009625001' => 'vvi', 'GSVIVG01014338001' => 'vvi', 'GSVIVG01020005001' => 'vvi', 'GSVIVG01021450001' => 'vvi', 'GSVIVG01023975001' => 'vvi', 'GSVIVG01034490001' => 'vvi', 'HanXRQChr04g0112071' => 'han', 'HanXRQChr05g0131151' => 'han', 'HanXRQChr09g0262371' => 'han', 'HanXRQChr09g0268401' => 'han', 'HanXRQChr10g0279241' => 'han', 'HanXRQChr10g0297961' => 'han', 'HanXRQChr11g0326231' => 'han', 'HanXRQChr11g0328471' => 'han', 'HanXRQChr16g0507941' => 'han', 'HanXRQChr17g0560211' => 'han', 'Haze_02108' => 'cav', 'Haze_02428' => 'cav', 'Haze_05593' => 'cav', 'Haze_06448' => 'cav', 'Haze_09427' => 'cav', 'Haze_12022' => 'cav', 'Haze_17612' => 'cav', 'Haze_17928' => 'cav', 'Hma1.2p1_0032F.1_g019250' => 'hma', 'Hma1.2p1_0163F.1_g072690' => 'hma', 'Hma1.2p1_0265F.1_g106710' => 'hma', 'Hma1.2p1_0286F.1_g113970' => 'hma', 'Hma1.2p1_0363F.1_g136640' => 'hma', 'Hma1.2p1_0584F.1_g183470' => 'hma', 'Hma1.2p1_0885F.1_g232570' => 'hma', 'HPP92_006022' => 'vpl', 'HPP92_007320' => 'vpl', 'HPP92_011521' => 'vpl', 'HPP92_019387' => 'vpl', 'HPP92_024038' => 'vpl', 'Hund05891' => 'sun', 'Hund06450' => 'sun', 'Hund12053' => 'sun', 'Hund16800' => 'sun', 'Hund21222' => 'sun', 'Hund22896' => 'sun', 'Hund23746' => 'sun', 'Hund27083' => 'sun', 'Lalb_Chr02g0141831' => 'lal', 'Lalb_Chr02g0141841' => 'lal', 'Lalb_Chr05g0220411' => 'lal', 'Lalb_Chr06g0162081' => 'lal', 'Lalb_Chr09g0327651' => 'lal', 'Lalb_Chr13g0295051' => 'lal', 'Lalb_Chr15g0086801' => 'lal', 'Lalb_Chr16g0383781' => 'lal', 'Lalb_Chr16g0383791' => 'lal', 'Lalb_Chr18g0055441' => 'lal', 'Lalb_Chr18g0059611' => 'lal', 'Lalb_Chr20g0109661' => 'lal', 'Lalb_Chr20g0109831' => 'lal', 'Lalb_Chr20g0121871' => 'lal', 'Lalb_Chr22g0355361' => 'lal', 'Lalb_Chr25g0286371' => 'lal', 'Lj1A1187G43' => 'lonja', 'Lj1A1205T50' => 'lonja', 'Lj1A800G33' => 'lonja', 'Lj1C1187T7' => 'lonja', 'Lj1C843T11' => 'lonja', 'Lj1g0010940' => 'lja', 'Lj2A288T69' => 'lonja', 'Lj3g0024276' => 'lja', 'Lj4A47T76' => 'lonja', 'Lj4g0005805' => 'lja', 'Lj4g0006097' => 'lja', 'Lj4g0008528' => 'lja', 'Lj4g0024907' => 'lja', 'Lj5g0012472' => 'lja', 'Lj5g0018648' => 'lja', 'Lj6C789G1' => 'lonja', 'Lj6g0004000' => 'lja', 'Lj7A292G67' => 'lonja', 'Lj7A292T64' => 'lonja', 'Lj9A400T58' => 'lonja', 'Lsat_1_v5_gn_1_126181' => 'lsa', 'Lsat_1_v5_gn_4_123041' => 'lsa', 'Lsat_1_v5_gn_4_133620' => 'lsa', 'Lsat_1_v5_gn_4_53221' => 'lsa', 'Lsat_1_v5_gn_4_71961' => 'lsa', 'Lsat_1_v5_gn_7_105241' => 'lsa', 'Lsat_1_v5_gn_7_21361' => 'lsa', 'Lsat_1_v5_gn_7_28860' => 'lsa', 'Lsat_1_v5_gn_7_31260' => 'lsa', 'Lsat_1_v5_gn_8_52801' => 'lsa', 'Manes.02G191400' => 'mes', 'Manes.03G110100' => 'mes', 'Manes.04G071100' => 'mes', 'Manes.05G100500' => 'mes', 'Manes.05G164700' => 'mes', 'Manes.15G087000' => 'mes', 'Manes.15G121500' => 'mes', 'Manes.16G028300' => 'mes', 'Manes.17G046100' => 'mes', 'Manes.17G069800' => 'mes', 'Manes.18G100500' => 'mes', 'Mapoly0002s0109' => 'mpo', 'Mapoly0024s0007' => 'mpo', 'Mapoly0089s0032' => 'mpo', 'MBI04_g42241_MAGBIO' => 'mbi', 'MBI05_g11988_MAGBIO' => 'mbi', 'MBI05_g35452_MAGBIO' => 'mbi', 'MBI07_g30179_MAGBIO' => 'mbi', 'MBI07_g35859_MAGBIO' => 'mbi', 'MBI07_g35860_MAGBIO' => 'mbi', 'MBI07_g37166_MAGBIO' => 'mbi', 'MBI08_g18172_MAGBIO' => 'mbi', 'MBI09_g08441_MAGBIO' => 'mbi', 'MBI13_g01676_MAGBIO' => 'mbi', 'MBI14_g42955_MAGBIO' => 'mbi', 'MBI16_g13161_MAGBIO' => 'mbi', 'MBI17_g27204_MAGBIO' => 'mbi', 'MBI19_g21595_MAGBIO' => 'mbi', 'MD00G1148400' => 'mdo', 'MD02G1301200' => 'mdo', 'MD03G1227800' => 'mdo', 'MD05G1041100' => 'mdo', 'MD05G1124800' => 'mdo', 'MD05G1284000' => 'mdo', 'MD05G1338800' => 'mdo', 'MD05G1338900' => 'mdo', 'MD07G1022800' => 'mdo', 'MD10G1047500' => 'mdo', 'MD10G1127500' => 'mdo', 'MD10G1262300' => 'mdo', 'MD10G1293800' => 'mdo', 'MD16G1074300' => 'mdo', 'Medtr1g021670' => 'mtr', 'Medtr1g096320' => 'mtr', 'Medtr2g013690' => 'mtr', 'Medtr2g019450' => 'mtr', 'Medtr2g085170' => 'mtr', 'Medtr4g088785' => 'mtr', 'Medtr8g055930' => 'mtr', 'Medtr8g085850' => 'mtr', 'MELO3C002605.2' => 'cme', 'MELO3C003891.2' => 'cme', 'MELO3C004012.2' => 'cme', 'MELO3C007134.2' => 'cme', 'MELO3C008118.2' => 'cme', 'MELO3C016700.2' => 'cme', 'MELO3C024127.2' => 'cme', 'MELO3C033361.2' => 'cme', 'MELO3C033362.2' => 'cme', 'Migut.C00430' => 'egut', 'Migut.C01246' => 'egut', 'Migut.E00101' => 'egut', 'Migut.H01486' => 'egut', 'Migut.H01939' => 'egut', 'Migut.K00360' => 'egut', 'Migut.M00910' => 'egut', 'Migut.M01139' => 'egut', 'Migut.N02677' => 'egut', 'MSTRG.13252' => 'ama', 'MSTRG.14701' => 'ama', 'MSTRG.1521' => 'ama', 'MSTRG.15884' => 'ama', 'MSTRG.16242' => 'ama', 'MSTRG.22285' => 'ama', 'MSTRG.22444' => 'ama', 'MSTRG.2349' => 'ama', 'MSTRG.26308' => 'ama', 'MSTRG.28296' => 'ama', 'MSTRG.9895' => 'ama', 'Nitab4.5_0000110g0060' => 'nta', 'Nitab4.5_0000420g0130' => 'nta', 'Nitab4.5_0000422g0030' => 'nta', 'Nitab4.5_0000560g0180' => 'nta', 'Nitab4.5_0000703g0100' => 'nta', 'Nitab4.5_0000786g0200' => 'nta', 'Nitab4.5_0001336g0020' => 'nta', 'Nitab4.5_0001796g0030' => 'nta', 'Nitab4.5_0003348g0060' => 'nta', 'Nitab4.5_0003698g0040' => 'nta', 'Nitab4.5_0003942g0090' => 'nta', 'Nitab4.5_0004775g0070' => 'nta', 'Nitab4.5_0004864g0030' => 'nta', 'Nitab4.5_0005615g0020' => 'nta', 'Nitab4.5_0009288g0030' => 'nta', 'Nitab4.5_0009341g0010' => 'nta', 'Nitab4.5_0009535g0010' => 'nta', 'Nn1g03995' => 'nnu', 'Nn1g04100' => 'nnu', 'Nn1g06530' => 'nnu', 'Nn3g16404' => 'nnu', 'Nn3g17212' => 'nnu', 'Nn3g20776' => 'nnu', 'Nn3g21923' => 'nnu', 'Nn5g27737' => 'nnu', 'Nn5g29461' => 'nnu', 'Nn7g38355' => 'nnu', 'Nn8g39873' => 'nnu', 'Oeu000548.2' => 'oeu', 'Oeu004672.1' => 'oeu', 'Oeu015605.2' => 'oeu', 'Oeu016092.1' => 'oeu', 'Oeu017879.3' => 'oeu', 'Oeu024910.1' => 'oeu', 'Oeu028965.1' => 'oeu', 'Oeu031269.1' => 'oeu', 'Oeu031270.1' => 'oeu', 'Oeu032535.1' => 'oeu', 'Oeu034151.1' => 'oeu', 'Oeu034152.1' => 'oeu', 'Oeu034588.2' => 'oeu', 'Oeu050846.1' => 'oeu', 'Oeu050849.2' => 'oeu', 'Oeu051063.2' => 'oeu', 'Oeu052368.1' => 'oeu', 'Oeu052370.1' => 'oeu', 'Os01g0210400' => 'osa', 'Os01g0304300' => 'osa', 'Os01g0749100' => 'osa', 'Os02g0745800' => 'osa', 'Os03g0769050' => 'osa', 'Os05g0531500' => 'osa', 'Os06g0724300' => 'osa', 'Os11g0198100' => 'osa', 'Peaxi162Scf00069g01425' => 'pax', 'Peaxi162Scf00280g00811' => 'pax', 'Peaxi162Scf00310g00615' => 'pax', 'Peaxi162Scf00362g00542' => 'pax', 'Peaxi162Scf00461g00310' => 'pax', 'Peaxi162Scf00530g00118' => 'pax', 'Peaxi162Scf00541g00057' => 'pax', 'Peaxi162Scf00661g00017' => 'pax', 'Peaxi162Scf00926g00027' => 'pax', 'Peaxi162Scf01064g00263' => 'pax', 'Peaxi162Scf01211g00135' => 'pax', 'PGR004G2336' => 'pgr', 'PGR042G0327' => 'pgr', 'PGR042G1957' => 'pgr', 'PGR042G2003' => 'pgr', 'PGR042G3929' => 'pgr', 'PGR083G1137' => 'pgr', 'PGR083G1364' => 'pgr', 'PGSC0003DMG400003381' => 'stu', 'PGSC0003DMG400003417' => 'stu', 'PGSC0003DMG400008981' => 'stu', 'PGSC0003DMG400012417' => 'stu', 'PGSC0003DMG400012823' => 'stu', 'PGSC0003DMG400016885' => 'stu', 'PGSC0003DMG400022812' => 'stu', 'PGSC0003DMG400029726' => 'stu', 'PGSC0003DMG401009243' => 'stu', 'PGSC0003DMG401031505' => 'stu', 'PGSC0003DMG402031505' => 'stu', 'Phvul.001G017600' => 'pvu', 'Phvul.002G193500' => 'pvu', 'Phvul.002G228900' => 'pvu', 'Phvul.002G236800' => 'pvu', 'Phvul.003G049500' => 'pvu', 'Phvul.005G072000' => 'pvu', 'Phvul.006G164800' => 'pvu', 'Phvul.006G185100' => 'pvu', 'Phvul.007G090000' => 'pvu', 'Potri.001G399800' => 'ptr', 'Potri.002G149900' => 'ptr', 'Potri.004G044100' => 'ptr', 'Potri.004G177600' => 'ptr', 'Potri.009G138000' => 'ptr', 'Potri.010G094000' => 'ptr', 'Potri.011G053000' => 'ptr', 'Potri.011G119300' => 'ptr', 'Potri.013G113700' => 'ptr', 'Potri.018G107800' => 'ptr', 'Potri.019G084100' => 'ptr', 'Pp3c14_23720' => 'ppa', 'Pp3c16_6340' => 'ppa', 'Pp3c23_13420' => 'ppa', 'Pp3c24_2740' => 'ppa', 'Pp3c25_860' => 'ppa', 'Pp3c8_21750' => 'ppa', 'Prupe.1G273000' => 'ppe', 'Prupe.1G273700' => 'ppe', 'Prupe.1G274100' => 'ppe', 'Prupe.2G023300' => 'ppe', 'Prupe.4G048000' => 'ppe', 'Prupe.4G080400' => 'ppe', 'Prupe.4G181200' => 'ppe', 'Prupe.8G056900' => 'ppe', 'Prupe.8G168700' => 'ppe', 'Psat1g189080' => 'psa', 'Psat1g204760' => 'psa', 'Psat4g175560' => 'psa', 'Psat4g177720' => 'psa', 'Psat5g244240' => 'psa', 'Psat6g010720' => 'psa', 'Psat6g187200' => 'psa', 'Psat7g072040' => 'psa', 'PSO017G3501' => 'pso', 'PSO063G2148' => 'pso', 'PSO063G5608' => 'pso', 'PSO210G6392' => 'pso', 'PSO541G2319' => 'pso', 'PSO541G2836' => 'pso', 'PSO541G4012' => 'pso', 'PSO541G6253' => 'pso', 'PSO675G0580' => 'pso', 'PSO675G0856' => 'pso', 'PSO675G5635' => 'pso', 'PSO675G9157' => 'pso', 'PSO832G1660' => 'pso', 'PSO832G1969' => 'pso', 'QL02p007186' => 'qlo', 'QL02p033904' => 'qlo', 'QL03p064391' => 'qlo', 'QL05p040593' => 'qlo', 'QL05p058242' => 'qlo', 'QL08p021825' => 'qlo', 'QL11p004981' => 'qlo', 'RcHm_v2.0_Chr1g0318301' => 'rch', 'RcHm_v2.0_Chr4g0418501' => 'rch', 'RcHm_v2.0_Chr4g0439971' => 'rch', 'RcHm_v2.0_Chr5g0008541' => 'rch', 'RcHm_v2.0_Chr5g0014101' => 'rch', 'RcHm_v2.0_Chr5g0014131' => 'rch', 'RcHm_v2.0_Chr5g0033621' => 'rch', 'RcHm_v2.0_Chr6g0272041' => 'rch', 'RcHm_v2.0_Chr6g0278831' => 'rch', 'Rhsim02G0130400' => 'rsi', 'Rhsim02G0171100' => 'rsi', 'Rhsim05G0053000' => 'rsi', 'Rhsim05G0053100' => 'rsi', 'Rhsim06G0096500' => 'rsi', 'Rhsim06G0096600' => 'rsi', 'Rhsim06G0199100' => 'rsi', 'Rhsim12G0062300' => 'rsi', 'Rhsim12G0062800' => 'rsi', 'Sabra02G0118600' => 'sbr', 'Sabra04G0027300' => 'sbr', 'Sabra04G0119500' => 'sbr', 'Sabra08G0112500' => 'sbr', 'Sabra11G0036800' => 'sbr', 'Sabra11G0103800' => 'sbr', 'Sabra13G0096300' => 'sbr', 'Sabra16G0262300' => 'sbr', 'Sabra18G0091700' => 'sbr', 'Sabra19G0095400' => 'sbr', 'SalBow6G3080' => 'sbo', 'SalBow7G1157' => 'sbo', 'SalBow7G2123' => 'sbo', 'SalBow7G2285' => 'sbo', 'SalBow7G3537' => 'sbo', 'SalBow8G2947' => 'sbo', 'SalBow8G4463' => 'sbo', 'SalBow8G5466' => 'sbo', 'Sc01g0001750' => 'sci', 'Sc02g0006640' => 'sci', 'Sc02g0006670' => 'sci', 'Sc04g0008220' => 'sci', 'Sc05g0006190' => 'sci', 'Sc08g0002760' => 'sci', 'Sc17g0006170' => 'sci', 'Sc22g0002050' => 'sci', 'Sc23g0001190' => 'sci', 'Sc24g0000980' => 'sci', 'Sed0006245' => 'sed', 'Sed0007543' => 'sed', 'Sed0009411' => 'sed', 'Sed0010765' => 'sed', 'Sed0012944' => 'sed', 'Sed0014682' => 'sed', 'Sed0016174' => 'sed', 'Sed0016796' => 'sed', 'Sed0020317' => 'sed', 'Sed0021467' => 'sed', 'SEGI_01316' => 'sgi', 'SEGI_03374' => 'sgi', 'SEGI_16265' => 'sgi', 'SEGI_18569' => 'sgi', 'SEGI_20351' => 'sgi', 'SEGI_26395' => 'sgi', 'SEGI_29469' => 'sgi', 'SEGI_34771' => 'sgi', 'SEGI_36769' => 'sgi', 'SEGI_37139' => 'sgi', 'SGA_v2.0_scaffold100G29687' => 'sas', 'SGA_v2.0_scaffold118G32472' => 'sas', 'SGA_v2.0_scaffold14G07051' => 'sas', 'SGA_v2.0_scaffold183G39845' => 'sas', 'SGA_v2.0_scaffold1G00174' => 'sas', 'SGA_v2.0_scaffold22G09714' => 'sas', 'SGA_v2.0_scaffold333G48992' => 'sas', 'SGA_v2.0_scaffold46G17491' => 'sas', 'SGA_v2.0_scaffold49G18294' => 'sas', 'SGA_v2.0_scaffold63G21658' => 'sas', 'SHI01741' => 'shi', 'SHI05771' => 'shi', 'SHI18077' => 'shi', 'SHI20525' => 'shi', 'SHI20527' => 'shi', 'SHI20528' => 'shi', 'SMO172G0185' => 'smo', 'SMO198G0020' => 'smo', 'SMO351G0006' => 'smo', 'SMO356G0118' => 'smo', 'SMO358G0296' => 'smo', 'SMO367G0079' => 'smo', 'SMO367G1277' => 'smo', 'Solyc01g014220.3' => 'sly', 'Solyc01g111770.2' => 'sly', 'Solyc02g078180.3' => 'sly', 'Solyc03g006430.3' => 'sly', 'Solyc03g006456.1' => 'sly', 'Solyc03g079860.2' => 'sly', 'Solyc04g079770.3' => 'sly', 'Solyc05g007430.4' => 'sly', 'Solyc07g063150.3' => 'sly', 'Solyc08g016620.3' => 'sly', 'Solyc09g057590.3' => 'sly', 'Solyc09g057600.1' => 'sly', 'Solyc10g009050.3' => 'sly', 'Solyc11g017420.2' => 'sly', 'Sopen01g053810' => 'spe', 'Sopen02g023040' => 'spe', 'Sopen03g002440' => 'spe', 'Sopen04g033350' => 'spe', 'Sopen05g003310' => 'spe', 'Sopen07g004050' => 'spe', 'Sopen07g031340' => 'spe', 'Sopen08g006990' => 'spe', 'Sopen10g004830' => 'spe', 'Sopen11g009370' => 'spe', 'Sp1g24450' => 'spa', 'Sp1g29670' => 'spa', 'Sp1g39600' => 'spa', 'Sp2g11080' => 'spa', 'Sp2g13970' => 'spa', 'Sp4g16130' => 'spa', 'Sp6g13080' => 'spa', 'Sp7g37270' => 'spa', 'TAR371G0065' => 'tar', 'TAR376G0340' => 'tar', 'TAR376G0435' => 'tar', 'TAR381G0002' => 'tar', 'TAR381G1236' => 'tar', 'TAR624G0055' => 'tar', 'TAR624G0324' => 'tar', 'TAR624G0696' => 'tar', 'TAR624G0906' => 'tar', 'TAR625G0107' => 'tar', 'TAR626G0015' => 'tar', 'TAR626G1356' => 'tar', 'TAR627G0888' => 'tar', 'TAR628G0399' => 'tar', 'TAR628G1327' => 'tar', 'TAR629G2831' => 'tar', 'TAR629G2874' => 'tar', 'TAR633G1432' => 'tar', 'TAR633G2771' => 'tar', 'THA.LOC104803394' => 'tha', 'THA.LOC104805153' => 'tha', 'THA.LOC104806784' => 'tha', 'THA.LOC104810473' => 'tha', 'THA.LOC104813100' => 'tha', 'THA.LOC104814215' => 'tha', 'THA.LOC104815554' => 'tha', 'THA.LOC104820544' => 'tha', 'THA.LOC104824754' => 'tha', 'THA.LOC104827717' => 'tha', 'Thecc.02G031400' => 'tca', 'Thecc.02G055900' => 'tca', 'Thecc.02G350800' => 'tca', 'Thecc.06G150900' => 'tca', 'Thecc.06G186600' => 'tca', 'Thecc.07G089600' => 'tca', 'Thecc.08G020400' => 'tca', 'Thecc.08G182100' => 'tca', 'Thhalv10000873m.g' => 'esa', 'Thhalv10004185m.g' => 'esa', 'Thhalv10006981m.g' => 'esa', 'Thhalv10007204m.g' => 'esa', 'Thhalv10011374m.g' => 'esa', 'Thhalv10013482m.g' => 'esa', 'Thhalv10017801m.g' => 'esa', 'Thhalv10024983m.g' => 'esa', 'TPR.G12072' => 'tpr', 'TPR.G15769' => 'tpr', 'TPR.G16504' => 'tpr', 'TPR.G16506' => 'tpr', 'TPR.G24345' => 'tpr', 'TPR.G26666' => 'tpr', 'TPR.G27320' => 'tpr', 'TPR.G31819' => 'tpr', 'TPR.G38879' => 'tpr', 'TPR.G39015' => 'tpr', 'TPR.G8819' => 'tpr', 'TWI09G0924' => 'twi', 'TWI12G0811' => 'twi', 'TWI12G1294' => 'twi', 'TWI31G0150' => 'twi', 'TWI36G1262' => 'twi', 'TWI38G1287' => 'twi', 'TWI38G1633' => 'twi', 'TWI38G1982' => 'twi', 'TWI39G0116' => 'twi', 'TWI60G1011' => 'twi', 'TWI63G0171' => 'twi', 'TWI73G0839' => 'twi', 'TWI79G1511' => 'twi', 'unitig_0.g915' => 'ugi', 'unitig_0.g916' => 'ugi', 'unitig_21.g20219' => 'ugi', 'unitig_21.g20416' => 'ugi', 'unitig_578.g16132' => 'ugi', 'unitig_578.g16718' => 'ugi', 'unitig_62.g23481' => 'ugi', 'unitig_744.g24535' => 'ugi', 'unitig_749.g13525' => 'ugi', 'vmacro01248' => 'vma', 'vmacro02290' => 'vma', 'vmacro10946' => 'vma', 'vmacro11865' => 'vma', 'vmacro12493' => 'vma', 'vmacro17322' => 'vma', 'vmacro21599' => 'vma', 'vmacro23041' => 'vma', 'VMungo0251G0004' => 'vmu', 'VMungo0251G2639' => 'vmu', 'VMungo0251G2967' => 'vmu', 'VMungo0540G0864' => 'vmu', 'VMungo0540G1569' => 'vmu', 'VMungo0647G0317' => 'vmu', 'VMungo0720G1373' => 'vmu', 'VMungo0720G1508' => 'vmu', 'VMungo1080G0485' => 'vmu', 'VMungo1215G3177' => 'vmu', 'Zm00001eb112600' => 'zma', 'Zm00001eb120220' => 'zma', 'Zm00001eb153240' => 'zma', 'Zm00001eb168880' => 'zma', 'Zm00001eb213920' => 'zma', 'Zm00001eb228280' => 'zma', 'Zm00001eb254580' => 'zma', 'Zm00001eb272180' => 'zma', 'Zm00001eb293190' => 'zma', 'Zm00001eb322930' => 'zma', 'Zm00001eb353360' => 'zma', 'Zm00001eb353390' => 'zma', 'Zm00001eb353430' => 'zma', 'Zm00001eb353440' => 'zma', 'Zm00001eb353780' => 'zma' ) $gf_id = 'HOM05D000499' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000499' ) $data_identifier = 'HOM05D000499' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 29, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 12, 'amhyb' => (int) 8, 'aly' => (int) 12, 'aox' => (int) 9, 'arhy' => (int) 26, 'ath' => (int) 8, 'atr' => (int) 7, 'acertr' => (int) 10, 'cqu' => (int) 15, 'bca' => (int) 29, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 11, 'cansat' => (int) 8, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 9, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 8, 'cpa' => (int) 10, 'csa' => (int) 7, 'camsi' => (int) 20, 'dca' => (int) 8, 'din' => (int) 12, 'dzi' => (int) 14, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 6, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 38, 'gra' => (int) 16, 'vvi' => (int) 8, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 5, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 11, 'lja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 11, 'mpo' => (int) 3, 'mbi' => (int) 14, 'mdo' => (int) 14, 'mtr' => (int) 8, 'cme' => (int) 9, 'egut' => (int) 9, 'ama' => (int) 11, 'nta' => (int) 17, 'nnu' => (int) 11, 'oeu' => (int) 18, 'osa' => (int) 8, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 6, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 9, 'rsi' => (int) 9, 'sbr' => (int) 10, 'sbo' => (int) 8, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 10, 'sas' => (int) 10, 'shi' => (int) 6, 'smo' => (int) 7, 'sly' => (int) 14, 'spe' => (int) 10, 'spa' => (int) 8, 'tar' => (int) 19, 'tha' => (int) 10, 'tca' => (int) 8, 'esa' => (int) 8, 'tpr' => (int) 11, 'twi' => (int) 13, 'ugi' => (int) 9, 'vma' => (int) 8, 'vmu' => (int) 10, 'zma' => (int) 15 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb353780' $species_info = array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ) $local_species = 'cla' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000499', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1066', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p29780' => 'bna', 'A02p33180' => 'bna', 'A03p16470' => 'bna', 'A03p66010' => 'bna', 'A04p25970' => 'bna', 'A06p01270' => 'bna', 'A06p46080' => 'bna', 'A07p11400' => 'bna', 'A08p01840' => 'bna', 'A08p08230' => 'bna', 'A08p25740' => 'bna', 'A09p32070' => 'bna', 'A09p37830' => 'bna', 'A09p42840' => 'bna', 'A09p42850' => 'bna', 'Aa31LG10G2060' => 'aar', 'Aa31LG2G7410' => 'aar', 'Aa31LG6G10200' => 'aar', 'Aa31LG6G16680' => 'aar', 'Aa31LG6G8470' => 'aar', 'Aa31LG9G12730' => 'aar', 'Aa31LG9G13680' => 'aar', 'Aa31LG9G14920' => 'aar', 'Aa31LG9G6650' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4977' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5467' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3254' => 'aag', 'Actinidia02578' => 'ach', 'Actinidia07693' => 'ach', 'Actinidia08413' => 'ach', 'Actinidia08414' => 'ach', 'Actinidia15289' => 'ach', 'Actinidia19871' => 'ach', 'Actinidia21475' => 'ach', 'Actinidia22576' => 'ach', 'Actinidia28327' => 'ach', 'Actinidia32491' => 'ach', 'Actinidia39463' => 'ach', 'Actinidia39571' => 'ach', 'Ah.01g013750' => 'amhyb', 'Ah.01g023210' => 'amhyb', 'Ah.04g164850' => 'amhyb', 'Ah.05g178060' => 'amhyb', 'Ah.07g204270' => 'amhyb', 'Ah.07g208480' => 'amhyb', 'Ah.09g237410' => 'amhyb', 'Ah.14g089460' => 'amhyb', 'AL1G41790' => 'aly', 'AL1G49050' => 'aly', 'AL1G53810' => 'aly', 'AL1G61400' => 'aly', 'AL4G18580' => 'aly', 'AL5G12510' => 'aly', 'AL5G12540' => 'aly', 'AL6G43230' => 'aly', 'AL7G10370' => 'aly', 'AL7G19250' => 'aly', 'AL8G12240' => 'aly', 'AL8G18540' => 'aly', 'Aqoxy1G02409' => 'aox', 'Aqoxy2G03993' => 'aox', 'Aqoxy3G03357' => 'aox', 'Aqoxy4G00785' => 'aox', 'Aqoxy5G02598' => 'aox', 'Aqoxy6G00132' => 'aox', 'Aqoxy7G01776' => 'aox', 'Aqoxy7G02316' => 'aox', 'Aqoxy7G03973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.12AFKW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B8730' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27IQR1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3F75VG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3RE0GA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41TCQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.527VTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FIR39' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5W8UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DA38EV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ63HS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H1I32C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HC27T5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4M8AP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7N3CZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9UVDZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LS1NQA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT1D4B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SKC4TM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCFV76' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF9Q1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQWD9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1ZM88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WE07RT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YCK7VH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJE6Q6' => 'arhy', 'AT1G28240' => 'ath', 'AT1G34550' => 'ath', 'AT1G53040' => 'ath', 'AT2G02910' => 'ath', 'AT4G09630' => 'ath', 'AT4G38500' => 'ath', 'AT5G42660' => 'ath', 'AT5G46220' => 'ath', 'ATR0152G026' => 'atr', 'ATR0564G343' => 'atr', 'ATR0706G151' => 'atr', 'ATR0733G207' => 'atr', 'ATR0751G234' => 'atr', 'ATR0807G048' => 'atr', 'ATR1091G084' => 'atr', 'Atru.chr10.1229' => 'acertr', 'Atru.chr10.1230' => 'acertr', 'Atru.chr10.1874' => 'acertr', 'Atru.chr11.1808' => 'acertr', 'Atru.chr13.1795' => 'acertr', 'Atru.chr13.570' => 'acertr', 'Atru.chr2.2608' => 'acertr', 'Atru.chr2.2609' => 'acertr', 'Atru.chr5.3428' => 'acertr', 'Atru.chr8.1171' => 'acertr', 'AUR62004651' => 'cqu', 'AUR62008675' => 'cqu', 'AUR62010014' => 'cqu', 'AUR62013004' => 'cqu', 'AUR62014825' => 'cqu', 'AUR62015015' => 'cqu', 'AUR62015151' => 'cqu', 'AUR62017020' => 'cqu', 'AUR62019422' => 'cqu', 'AUR62023570' => 'cqu', 'AUR62025571' => 'cqu', 'AUR62029098' => 'cqu', 'AUR62033863' => 'cqu', 'AUR62034296' => 'cqu', 'AUR62040075' => 'cqu', 'BcaB02g07334' => 'bca', 'BcaB02g10575' => 'bca', 'BcaB03g12119' => 'bca', 'BcaB03g12120' => 'bca', 'BcaB03g13945' => 'bca', 'BcaB04g17123' => 'bca', 'BcaB04g17867' => 'bca', 'BcaB04g19839' => 'bca', 'BcaB07g30317' => 'bca', 'BcaB07g32432' => 'bca', 'BcaB07g33362' => 'bca', 'BcaB08g36611' => 'bca', 'BcaC01g00028' => 'bca', 'BcaC01g01356' => 'bca', 'BcaC01g02034' => 'bca', 'BcaC01g06051' => 'bca', 'BcaC03g16839' => 'bca', 'BcaC03g17176' => 'bca', 'BcaC05g26829' => 'bca', 'BcaC06g31490' => 'bca', 'BcaC06g35344' => 'bca', 'BcaC06g36570' => 'bca', 'BcaC07g37537' => 'bca', 'BcaC08g43491' => 'bca', 'BcaC08g43773' => 'bca', 'BcaNung00234' => 'bca', 'BcaNung01982' => 'bca', 'BcaNung03707' => 'bca', 'BcaNung06454' => 'bca', 'BolC2t10762H' => 'bol', 'BolC2t11191H' => 'bol', 'BolC3t14322H' => 'bol', 'BolC3t19747H' => 'bol', 'BolC3t21425H' => 'bol', 'BolC4t27800H' => 'bol', 'BolC5t31423H' => 'bol', 'BolC6t35951H' => 'bol', 'BolC6t36282H' => 'bol', 'BolC7t40678H' => 'bol', 'BolC7t40679H' => 'bol', 'BolC7t42222H' => 'bol', 'BolC7t43492H' => 'bol', 'BolC7t46785H' => 'bol', 'BolC8t47853H' => 'bol', 'BolC9t56805H' => 'bol', 'BraA02t08000Z' => 'bra', 'BraA02t08341Z' => 'bra', 'BraA03t10936Z' => 'bra', 'BraA03t15657Z' => 'bra', 'BraA04t18100Z' => 'bra', 'BraA05t20523Z' => 'bra', 'BraA06t23353Z' => 'bra', 'BraA06t27473Z' => 'bra', 'BraA06t27769Z' => 'bra', 'BraA07t28928Z' => 'bra', 'BraA08t32236Z' => 'bra', 'BraA08t32841Z' => 'bra', 'BraA08t34524Z' => 'bra', 'BraA09t38742Z' => 'bra', 'BraA09t39295Z' => 'bra', 'C02p47180' => 'bna', 'C02p50990' => 'bna', 'C03p19360' => 'bna', 'C03p74950' => 'bna', 'C03p91000' => 'bna', 'C04p63260' => 'bna', 'C05p27050' => 'bna', 'C06p08750' => 'bna', 'C06p11490' => 'bna', 'C07p02820' => 'bna', 'C07p17180' => 'bna', 'C07p29440' => 'bna', 'C07p63730' => 'bna', 'C09p39260' => 'bna', 'CAN.G1164.34' => 'can', 'CAN.G1164.39' => 'can', 'CAN.G1530.3' => 'can', 'CAN.G162.61' => 'can', 'CAN.G176.6' => 'can', 'CAN.G289.49' => 'can', 'CAN.G370.21' => 'can', 'CAN.G370.22' => 'can', 'CAN.G371.117' => 'can', 'CAN.G58.37' => 'can', 'CAN.G588.98' => 'can', 'CANSAT21G2266' => 'cansat', 'CANSAT25G2799' => 'cansat', 'CANSAT35G0862' => 'cansat', 'CANSAT35G1704' => 'cansat', 'CANSAT35G1760' => 'cansat', 'CANSAT56G3971' => 'cansat', 'CANSAT56G4116' => 'cansat', 'CANSAT80G1259' => 'cansat', 'CARHR027730' => 'chi', 'CARHR033880' => 'chi', 'CARHR043270' => 'chi', 'CARHR145330' => 'chi', 'CARHR145340' => 'chi', 'CARHR175570' => 'chi', 'CARHR181570' => 'chi', 'CARHR258470' => 'chi', 'CARHR260490' => 'chi', 'CARHR294220' => 'chi', 'Carub.0001s2668' => 'cru', 'Carub.0001s3257' => 'cru', 'Carub.0001s4220' => 'cru', 'Carub.0005s0179' => 'cru', 'Carub.0006s2807' => 'cru', 'Carub.0007s0039' => 'cru', 'Carub.0008s0169' => 'cru', 'Carub.0008s0636' => 'cru', 'Ca_00338_v3' => 'car', 'Ca_00542_v3' => 'car', 'Ca_01844_v3' => 'car', 'Ca_10611_v3' => 'car', 'Ca_13326_v3' => 'car', 'Ca_17944_v3' => 'car', 'Ca_18546_v3' => 'car', 'Ca_24219_v3' => 'car', 'Ca_29972_v3' => 'car', 'CBR_g3681' => 'cbr', 'CBR_g40021' => 'cbr', 'Cc01_g08140' => 'ccan', 'Cc02_g13410' => 'ccan', 'Cc02_g37480' => 'ccan', 'Cc05_g12030' => 'ccan', 'Cc09_g03370' => 'ccan', 'Cc09_g10300' => 'ccan', 'Cc10_g03530' => 'ccan', 'Cc10_g11380' => 'ccan', 'CDE01G0176' => 'cde', 'CDE02G0675' => 'cde', 'CDE02G0942' => 'cde', 'CDE02G1153' => 'cde', 'CDE02G4177' => 'cde', 'CDE04G2117' => 'cde', 'CDE04G2736' => 'cde', 'CDE08G1161' => 'cde', 'CDE09G1238' => 'cde', 'Cfa000467' => 'cfa', 'Cfa000947' => 'cfa', 'Cfa004969' => 'cfa', 'Cfa005284' => 'cfa', 'Cfa008993' => 'cfa', 'Cfa018187' => 'cfa', 'Cfa018454' => 'cfa', 'Cfa020585' => 'cfa', 'Ciclev10000424m.g' => 'ccl', 'Ciclev10003605m.g' => 'ccl', 'Ciclev10007828m.g' => 'ccl', 'Ciclev10014620m.g' => 'ccl', 'Ciclev10015169m.g' => 'ccl', 'Ciclev10018291m.g' => 'ccl', 'Ciclev10028256m.g' => 'ccl', 'Ciclev10033822m.g' => 'ccl', 'CiPaw.05G060300' => 'cil', 'CiPaw.05G085000' => 'cil', 'CiPaw.06G083700' => 'cil', 'CiPaw.06G120300' => 'cil', 'CiPaw.09G060500' => 'cil', 'CiPaw.09G123800' => 'cil', 'CiPaw.11G169700' => 'cil', 'CiPaw.12G118300' => 'cil', 'CiPaw.15G071000' => 'cil', 'CiPaw.15G081900' => 'cil', 'ClCG01G024610' => 'cla', 'ClCG03G006070' => 'cla', 'ClCG05G019250' => 'cla', 'ClCG09G009500' => 'cla', 'ClCG11G008200' => 'cla', 'ClCG11G018080' => 'cla', 'COL.COLO4_17373' => 'col', 'COL.COLO4_22994' => 'col', 'COL.COLO4_26389' => 'col', 'COL.COLO4_27170' => 'col', 'COL.COLO4_31074' => 'col', 'COL.COLO4_31465' => 'col', 'COL.COLO4_36438' => 'col', 'COL.COLO4_36439' => 'col', 'Cpa.g.c38781' => 'cpa', 'Cpa.g.sc128.12' => 'cpa', 'Cpa.g.sc166.7' => 'cpa', 'Cpa.g.sc166.8' => 'cpa', 'Cpa.g.sc20.111' => 'cpa', 'Cpa.g.sc27.31' => 'cpa', 'Cpa.g.sc64.36' => 'cpa', 'Cpa.g.sc64.37' => 'cpa', 'Cpa.g.sc66.49' => 'cpa', 'Cpa.g.sc80.64' => 'cpa', 'CsaV3_1G012320' => 'csa', 'CsaV3_2G008480' => 'csa', 'CsaV3_2G033450' => 'csa', 'CsaV3_3G044830' => 'csa', 'CsaV3_4G033710' => 'csa', 'CsaV3_6G051730' => 'csa', 'CsaV3_7G025350' => 'csa', 'CSS0001067' => 'camsi', 'CSS0005996' => 'camsi', 'CSS0006590' => 'camsi', 'CSS0009673' => 'camsi', 'CSS0010201' => 'camsi', 'CSS0010549' => 'camsi', 'CSS0011364' => 'camsi', 'CSS0014473' => 'camsi', 'CSS0014961' => 'camsi', 'CSS0020191' => 'camsi', 'CSS0021165' => 'camsi', 'CSS0022306' => 'camsi', 'CSS0030591' => 'camsi', 'CSS0030696' => 'camsi', 'CSS0032653' => 'camsi', 'CSS0037487' => 'camsi', 'CSS0041102' => 'camsi', 'CSS0041261' => 'camsi', 'CSS0046246' => 'camsi', 'CSS0049256' => 'camsi', 'DCAR_004075' => 'dca', 'DCAR_011538' => 'dca', 'DCAR_019553' => 'dca', 'DCAR_020952' => 'dca', 'DCAR_021739' => 'dca', 'DCAR_027407' => 'dca', 'DCAR_027913' => 'dca', 'DCAR_028066' => 'dca', 'Dinv05899' => 'din', 'Dinv07563' => 'din', 'Dinv08010' => 'din', 'Dinv14125' => 'din', 'Dinv20172' => 'din', 'Dinv30743' => 'din', 'Dinv31229' => 'din', 'Dinv34162' => 'din', 'Dinv36028' => 'din', 'Dinv39368' => 'din', 'Dinv40565' => 'din', 'Dinv41706' => 'din', 'Duzib052G0089' => 'dzi', 'Duzib116G0641' => 'dzi', 'Duzib132G0069' => 'dzi', 'Duzib132G1219' => 'dzi', 'Duzib147G0278' => 'dzi', 'Duzib160G0480' => 'dzi', 'Duzib170G0661' => 'dzi', 'Duzib177G0591' => 'dzi', 'Duzib187G1353' => 'dzi', 'Duzib192G0858' => 'dzi', 'Duzib192G0883' => 'dzi', 'Duzib213G0506' => 'dzi', 'Duzib235G0289' => 'dzi', 'Duzib251G0422' => 'dzi', 'ECA232G3898' => 'eca', 'ECA233G5950' => 'eca', 'ECA234G1699' => 'eca', 'ECA234G2421' => 'eca', 'ECA236G0426' => 'eca', 'ECA236G4331' => 'eca', 'ECA248G2573' => 'eca', 'EL10Ac1g00077' => 'bvu', 'EL10Ac1g01746' => 'bvu', 'EL10Ac2g03464' => 'bvu', 'EL10Ac4g08176' => 'bvu', 'EL10Ac7g17521' => 'bvu', 'EL10Ac8g20386' => 'bvu', 'EL10Ac9g21343' => 'bvu', 'EL10Ac9g22688' => 'bvu', 'Eucgr.B03434' => 'egr', 'Eucgr.D00618' => 'egr', 'Eucgr.E02395' => 'egr', 'Eucgr.F01129' => 'egr', 'Eucgr.F02622' => 'egr', 'Eucgr.F04207' => 'egr', 'FAN01G0570' => 'fan', 'FAN03G3351' => 'fan', 'FAN06G3702' => 'fan', 'FAN07G2149' => 'fan', 'FAN10G3758' => 'fan', 'FAN11G1170' => 'fan', 'FAN11G2050' => 'fan', 'FAN11G2724' => 'fan', 'FAN12G1700' => 'fan', 'FAN12G2028' => 'fan', 'FAN15G1160' => 'fan', 'FAN15G3063' => 'fan', 'FAN16G2540' => 'fan', 'FAN16G3077' => 'fan', 'FAN16G3624' => 'fan', 'FAN17G0221' => 'fan', 'FAN20G2492' => 'fan', 'FAN20G2905' => 'fan', 'FAN21G0548' => 'fan', 'FAN21G1300' => 'fan', 'FAN22G0077' => 'fan', 'FAN22G1315' => 'fan', 'FAN24G1280' => 'fan', 'FAN24G1445' => 'fan', 'FAN24G3527' => 'fan', 'FAN25G0464' => 'fan', 'FAN25G2885' => 'fan', 'FAN25G3270' => 'fan', 'FAN27G1101' => 'fan', 'FAN27G2846' => 'fan', 'FAN27G3524' => 'fan', 'FvH4_2g11770' => 'fve', 'FvH4_2g15630' => 'fve', 'FvH4_3g05570' => 'fve', 'FvH4_3g09110' => 'fve', 'FvH4_3g19940' => 'fve', 'FvH4_4g04821' => 'fve', 'FvH4_4g31480' => 'fve', 'FvH4_7g01740' => 'fve', 'Glyma.05G130400' => 'gma', 'Glyma.05G156400' => 'gma', 'Glyma.07G197000' => 'gma', 'Glyma.08G085151' => 'gma', 'Glyma.08G114500' => 'gma', 'Glyma.08G300400' => 'gma', 'Glyma.10G215800' => 'gma', 'Glyma.12G224400' => 'gma', 'Glyma.13G179300' => 'gma', 'Glyma.13G218151' => 'gma', 'Glyma.13G238800' => 'gma', 'Glyma.13G276900' => 'gma', 'Glyma.14G078200' => 'gma', 'Glyma.15G074500' => 'gma', 'Glyma.15G094100' => 'gma', 'Glyma.17G247200' => 'gma', 'Glyma.18G120100' => 'gma', 'Glyma.20G176000' => 'gma', 'Gohir.A01G063600' => 'ghi', 'Gohir.A01G170301' => 'ghi', 'Gohir.A02G060500' => 'ghi', 'Gohir.A05G133850' => 'ghi', 'Gohir.A05G161400' => 'ghi', 'Gohir.A06G012900' => 'ghi', 'Gohir.A06G035901' => 'ghi', 'Gohir.A06G127100' => 'ghi', 'Gohir.A06G210500' => 'ghi', 'Gohir.A08G008650' => 'ghi', 'Gohir.A09G072700' => 'ghi', 'Gohir.A09G088301' => 'ghi', 'Gohir.A10G040600' => 'ghi', 'Gohir.A12G036300' => 'ghi', 'Gohir.A12G143350' => 'ghi', 'Gohir.A12G165500' => 'ghi', 'Gohir.A13G145700' => 'ghi', 'Gohir.D01G050000' => 'ghi', 'Gohir.D01G051366' => 'ghi', 'Gohir.D01G161350' => 'ghi', 'Gohir.D02G065900' => 'ghi', 'Gohir.D05G164200' => 'ghi', 'Gohir.D05G355500' => 'ghi', 'Gohir.D06G010400' => 'ghi', 'Gohir.D06G111250' => 'ghi', 'Gohir.D06G132000' => 'ghi', 'Gohir.D06G210500' => 'ghi', 'Gohir.D07G165675' => 'ghi', 'Gohir.D08G062240' => 'ghi', 'Gohir.D08G086101' => 'ghi', 'Gohir.D08G138060' => 'ghi', 'Gohir.D09G072300' => 'ghi', 'Gohir.D10G041400' => 'ghi', 'Gohir.D11G191020' => 'ghi', 'Gohir.D11G212066' => 'ghi', 'Gohir.D12G036300' => 'ghi', 'Gohir.D12G168600' => 'ghi', 'Gohir.D13G150600' => 'ghi', 'Gorai.001G057300' => 'gra', 'Gorai.002G069900' => 'gra', 'Gorai.002G200000' => 'gra', 'Gorai.003G067600' => 'gra', 'Gorai.005G074800' => 'gra', 'Gorai.006G087300' => 'gra', 'Gorai.008G037500' => 'gra', 'Gorai.008G181400' => 'gra', 'Gorai.009G169400' => 'gra', 'Gorai.009G387900' => 'gra', 'Gorai.010G013300' => 'gra', 'Gorai.010G153800' => 'gra', 'Gorai.010G255800' => 'gra', 'Gorai.011G043700' => 'gra', 'Gorai.011G198900' => 'gra', 'Gorai.013G168400' => 'gra', 'GSVIVG01005212001' => 'vvi', 'GSVIVG01006163001' => 'vvi', 'GSVIVG01009625001' => 'vvi', 'GSVIVG01014338001' => 'vvi', 'GSVIVG01020005001' => 'vvi', 'GSVIVG01021450001' => 'vvi', 'GSVIVG01023975001' => 'vvi', 'GSVIVG01034490001' => 'vvi', 'HanXRQChr04g0112071' => 'han', 'HanXRQChr05g0131151' => 'han', 'HanXRQChr09g0262371' => 'han', 'HanXRQChr09g0268401' => 'han', 'HanXRQChr10g0279241' => 'han', 'HanXRQChr10g0297961' => 'han', 'HanXRQChr11g0326231' => 'han', 'HanXRQChr11g0328471' => 'han', 'HanXRQChr16g0507941' => 'han', 'HanXRQChr17g0560211' => 'han', 'Haze_02108' => 'cav', 'Haze_02428' => 'cav', 'Haze_05593' => 'cav', 'Haze_06448' => 'cav', 'Haze_09427' => 'cav', 'Haze_12022' => 'cav', 'Haze_17612' => 'cav', 'Haze_17928' => 'cav', 'Hma1.2p1_0032F.1_g019250' => 'hma', 'Hma1.2p1_0163F.1_g072690' => 'hma', 'Hma1.2p1_0265F.1_g106710' => 'hma', 'Hma1.2p1_0286F.1_g113970' => 'hma', 'Hma1.2p1_0363F.1_g136640' => 'hma', 'Hma1.2p1_0584F.1_g183470' => 'hma', 'Hma1.2p1_0885F.1_g232570' => 'hma', 'HPP92_006022' => 'vpl', 'HPP92_007320' => 'vpl', 'HPP92_011521' => 'vpl', 'HPP92_019387' => 'vpl', 'HPP92_024038' => 'vpl', 'Hund05891' => 'sun', 'Hund06450' => 'sun', 'Hund12053' => 'sun', 'Hund16800' => 'sun', 'Hund21222' => 'sun', 'Hund22896' => 'sun', 'Hund23746' => 'sun', 'Hund27083' => 'sun', 'Lalb_Chr02g0141831' => 'lal', 'Lalb_Chr02g0141841' => 'lal', 'Lalb_Chr05g0220411' => 'lal', 'Lalb_Chr06g0162081' => 'lal', 'Lalb_Chr09g0327651' => 'lal', 'Lalb_Chr13g0295051' => 'lal', 'Lalb_Chr15g0086801' => 'lal', 'Lalb_Chr16g0383781' => 'lal', 'Lalb_Chr16g0383791' => 'lal', 'Lalb_Chr18g0055441' => 'lal', 'Lalb_Chr18g0059611' => 'lal', 'Lalb_Chr20g0109661' => 'lal', 'Lalb_Chr20g0109831' => 'lal', 'Lalb_Chr20g0121871' => 'lal', 'Lalb_Chr22g0355361' => 'lal', 'Lalb_Chr25g0286371' => 'lal', 'Lj1A1187G43' => 'lonja', 'Lj1A1205T50' => 'lonja', 'Lj1A800G33' => 'lonja', 'Lj1C1187T7' => 'lonja', 'Lj1C843T11' => 'lonja', 'Lj1g0010940' => 'lja', 'Lj2A288T69' => 'lonja', 'Lj3g0024276' => 'lja', 'Lj4A47T76' => 'lonja', 'Lj4g0005805' => 'lja', 'Lj4g0006097' => 'lja', 'Lj4g0008528' => 'lja', 'Lj4g0024907' => 'lja', 'Lj5g0012472' => 'lja', 'Lj5g0018648' => 'lja', 'Lj6C789G1' => 'lonja', 'Lj6g0004000' => 'lja', 'Lj7A292G67' => 'lonja', 'Lj7A292T64' => 'lonja', 'Lj9A400T58' => 'lonja', 'Lsat_1_v5_gn_1_126181' => 'lsa', 'Lsat_1_v5_gn_4_123041' => 'lsa', 'Lsat_1_v5_gn_4_133620' => 'lsa', 'Lsat_1_v5_gn_4_53221' => 'lsa', 'Lsat_1_v5_gn_4_71961' => 'lsa', 'Lsat_1_v5_gn_7_105241' => 'lsa', 'Lsat_1_v5_gn_7_21361' => 'lsa', 'Lsat_1_v5_gn_7_28860' => 'lsa', 'Lsat_1_v5_gn_7_31260' => 'lsa', 'Lsat_1_v5_gn_8_52801' => 'lsa', 'Manes.02G191400' => 'mes', 'Manes.03G110100' => 'mes', 'Manes.04G071100' => 'mes', 'Manes.05G100500' => 'mes', 'Manes.05G164700' => 'mes', 'Manes.15G087000' => 'mes', 'Manes.15G121500' => 'mes', 'Manes.16G028300' => 'mes', 'Manes.17G046100' => 'mes', 'Manes.17G069800' => 'mes', 'Manes.18G100500' => 'mes', 'Mapoly0002s0109' => 'mpo', 'Mapoly0024s0007' => 'mpo', 'Mapoly0089s0032' => 'mpo', 'MBI04_g42241_MAGBIO' => 'mbi', 'MBI05_g11988_MAGBIO' => 'mbi', 'MBI05_g35452_MAGBIO' => 'mbi', 'MBI07_g30179_MAGBIO' => 'mbi', 'MBI07_g35859_MAGBIO' => 'mbi', 'MBI07_g35860_MAGBIO' => 'mbi', 'MBI07_g37166_MAGBIO' => 'mbi', 'MBI08_g18172_MAGBIO' => 'mbi', 'MBI09_g08441_MAGBIO' => 'mbi', 'MBI13_g01676_MAGBIO' => 'mbi', 'MBI14_g42955_MAGBIO' => 'mbi', 'MBI16_g13161_MAGBIO' => 'mbi', 'MBI17_g27204_MAGBIO' => 'mbi', 'MBI19_g21595_MAGBIO' => 'mbi', 'MD00G1148400' => 'mdo', 'MD02G1301200' => 'mdo', 'MD03G1227800' => 'mdo', 'MD05G1041100' => 'mdo', 'MD05G1124800' => 'mdo', 'MD05G1284000' => 'mdo', 'MD05G1338800' => 'mdo', 'MD05G1338900' => 'mdo', 'MD07G1022800' => 'mdo', 'MD10G1047500' => 'mdo', 'MD10G1127500' => 'mdo', 'MD10G1262300' => 'mdo', 'MD10G1293800' => 'mdo', 'MD16G1074300' => 'mdo', 'Medtr1g021670' => 'mtr', 'Medtr1g096320' => 'mtr', 'Medtr2g013690' => 'mtr', 'Medtr2g019450' => 'mtr', 'Medtr2g085170' => 'mtr', 'Medtr4g088785' => 'mtr', 'Medtr8g055930' => 'mtr', 'Medtr8g085850' => 'mtr', 'MELO3C002605.2' => 'cme', 'MELO3C003891.2' => 'cme', 'MELO3C004012.2' => 'cme', 'MELO3C007134.2' => 'cme', 'MELO3C008118.2' => 'cme', 'MELO3C016700.2' => 'cme', 'MELO3C024127.2' => 'cme', 'MELO3C033361.2' => 'cme', 'MELO3C033362.2' => 'cme', 'Migut.C00430' => 'egut', 'Migut.C01246' => 'egut', 'Migut.E00101' => 'egut', 'Migut.H01486' => 'egut', 'Migut.H01939' => 'egut', 'Migut.K00360' => 'egut', 'Migut.M00910' => 'egut', 'Migut.M01139' => 'egut', 'Migut.N02677' => 'egut', 'MSTRG.13252' => 'ama', 'MSTRG.14701' => 'ama', 'MSTRG.1521' => 'ama', 'MSTRG.15884' => 'ama', 'MSTRG.16242' => 'ama', 'MSTRG.22285' => 'ama', 'MSTRG.22444' => 'ama', 'MSTRG.2349' => 'ama', 'MSTRG.26308' => 'ama', 'MSTRG.28296' => 'ama', 'MSTRG.9895' => 'ama', 'Nitab4.5_0000110g0060' => 'nta', 'Nitab4.5_0000420g0130' => 'nta', 'Nitab4.5_0000422g0030' => 'nta', 'Nitab4.5_0000560g0180' => 'nta', 'Nitab4.5_0000703g0100' => 'nta', 'Nitab4.5_0000786g0200' => 'nta', 'Nitab4.5_0001336g0020' => 'nta', 'Nitab4.5_0001796g0030' => 'nta', 'Nitab4.5_0003348g0060' => 'nta', 'Nitab4.5_0003698g0040' => 'nta', 'Nitab4.5_0003942g0090' => 'nta', 'Nitab4.5_0004775g0070' => 'nta', 'Nitab4.5_0004864g0030' => 'nta', 'Nitab4.5_0005615g0020' => 'nta', 'Nitab4.5_0009288g0030' => 'nta', 'Nitab4.5_0009341g0010' => 'nta', 'Nitab4.5_0009535g0010' => 'nta', 'Nn1g03995' => 'nnu', 'Nn1g04100' => 'nnu', 'Nn1g06530' => 'nnu', 'Nn3g16404' => 'nnu', 'Nn3g17212' => 'nnu', 'Nn3g20776' => 'nnu', 'Nn3g21923' => 'nnu', 'Nn5g27737' => 'nnu', 'Nn5g29461' => 'nnu', 'Nn7g38355' => 'nnu', 'Nn8g39873' => 'nnu', 'Oeu000548.2' => 'oeu', 'Oeu004672.1' => 'oeu', 'Oeu015605.2' => 'oeu', 'Oeu016092.1' => 'oeu', 'Oeu017879.3' => 'oeu', 'Oeu024910.1' => 'oeu', 'Oeu028965.1' => 'oeu', 'Oeu031269.1' => 'oeu', 'Oeu031270.1' => 'oeu', 'Oeu032535.1' => 'oeu', 'Oeu034151.1' => 'oeu', 'Oeu034152.1' => 'oeu', 'Oeu034588.2' => 'oeu', 'Oeu050846.1' => 'oeu', 'Oeu050849.2' => 'oeu', 'Oeu051063.2' => 'oeu', 'Oeu052368.1' => 'oeu', 'Oeu052370.1' => 'oeu', 'Os01g0210400' => 'osa', 'Os01g0304300' => 'osa', 'Os01g0749100' => 'osa', 'Os02g0745800' => 'osa', 'Os03g0769050' => 'osa', 'Os05g0531500' => 'osa', 'Os06g0724300' => 'osa', 'Os11g0198100' => 'osa', 'Peaxi162Scf00069g01425' => 'pax', 'Peaxi162Scf00280g00811' => 'pax', 'Peaxi162Scf00310g00615' => 'pax', 'Peaxi162Scf00362g00542' => 'pax', 'Peaxi162Scf00461g00310' => 'pax', 'Peaxi162Scf00530g00118' => 'pax', 'Peaxi162Scf00541g00057' => 'pax', 'Peaxi162Scf00661g00017' => 'pax', 'Peaxi162Scf00926g00027' => 'pax', 'Peaxi162Scf01064g00263' => 'pax', 'Peaxi162Scf01211g00135' => 'pax', 'PGR004G2336' => 'pgr', 'PGR042G0327' => 'pgr', 'PGR042G1957' => 'pgr', 'PGR042G2003' => 'pgr', 'PGR042G3929' => 'pgr', 'PGR083G1137' => 'pgr', 'PGR083G1364' => 'pgr', 'PGSC0003DMG400003381' => 'stu', 'PGSC0003DMG400003417' => 'stu', 'PGSC0003DMG400008981' => 'stu', 'PGSC0003DMG400012417' => 'stu', 'PGSC0003DMG400012823' => 'stu', 'PGSC0003DMG400016885' => 'stu', 'PGSC0003DMG400022812' => 'stu', 'PGSC0003DMG400029726' => 'stu', 'PGSC0003DMG401009243' => 'stu', 'PGSC0003DMG401031505' => 'stu', 'PGSC0003DMG402031505' => 'stu', 'Phvul.001G017600' => 'pvu', 'Phvul.002G193500' => 'pvu', 'Phvul.002G228900' => 'pvu', 'Phvul.002G236800' => 'pvu', 'Phvul.003G049500' => 'pvu', 'Phvul.005G072000' => 'pvu', 'Phvul.006G164800' => 'pvu', 'Phvul.006G185100' => 'pvu', 'Phvul.007G090000' => 'pvu', 'Potri.001G399800' => 'ptr', 'Potri.002G149900' => 'ptr', 'Potri.004G044100' => 'ptr', 'Potri.004G177600' => 'ptr', 'Potri.009G138000' => 'ptr', 'Potri.010G094000' => 'ptr', 'Potri.011G053000' => 'ptr', 'Potri.011G119300' => 'ptr', 'Potri.013G113700' => 'ptr', 'Potri.018G107800' => 'ptr', 'Potri.019G084100' => 'ptr', 'Pp3c14_23720' => 'ppa', 'Pp3c16_6340' => 'ppa', 'Pp3c23_13420' => 'ppa', 'Pp3c24_2740' => 'ppa', 'Pp3c25_860' => 'ppa', 'Pp3c8_21750' => 'ppa', 'Prupe.1G273000' => 'ppe', 'Prupe.1G273700' => 'ppe', 'Prupe.1G274100' => 'ppe', 'Prupe.2G023300' => 'ppe', 'Prupe.4G048000' => 'ppe', 'Prupe.4G080400' => 'ppe', 'Prupe.4G181200' => 'ppe', 'Prupe.8G056900' => 'ppe', 'Prupe.8G168700' => 'ppe', 'Psat1g189080' => 'psa', 'Psat1g204760' => 'psa', 'Psat4g175560' => 'psa', 'Psat4g177720' => 'psa', 'Psat5g244240' => 'psa', 'Psat6g010720' => 'psa', 'Psat6g187200' => 'psa', 'Psat7g072040' => 'psa', 'PSO017G3501' => 'pso', 'PSO063G2148' => 'pso', 'PSO063G5608' => 'pso', 'PSO210G6392' => 'pso', 'PSO541G2319' => 'pso', 'PSO541G2836' => 'pso', 'PSO541G4012' => 'pso', 'PSO541G6253' => 'pso', 'PSO675G0580' => 'pso', 'PSO675G0856' => 'pso', 'PSO675G5635' => 'pso', 'PSO675G9157' => 'pso', 'PSO832G1660' => 'pso', 'PSO832G1969' => 'pso', 'QL02p007186' => 'qlo', 'QL02p033904' => 'qlo', 'QL03p064391' => 'qlo', 'QL05p040593' => 'qlo', 'QL05p058242' => 'qlo', 'QL08p021825' => 'qlo', 'QL11p004981' => 'qlo', 'RcHm_v2.0_Chr1g0318301' => 'rch', 'RcHm_v2.0_Chr4g0418501' => 'rch', 'RcHm_v2.0_Chr4g0439971' => 'rch', 'RcHm_v2.0_Chr5g0008541' => 'rch', 'RcHm_v2.0_Chr5g0014101' => 'rch', 'RcHm_v2.0_Chr5g0014131' => 'rch', 'RcHm_v2.0_Chr5g0033621' => 'rch', 'RcHm_v2.0_Chr6g0272041' => 'rch', 'RcHm_v2.0_Chr6g0278831' => 'rch', 'Rhsim02G0130400' => 'rsi', 'Rhsim02G0171100' => 'rsi', 'Rhsim05G0053000' => 'rsi', 'Rhsim05G0053100' => 'rsi', 'Rhsim06G0096500' => 'rsi', 'Rhsim06G0096600' => 'rsi', 'Rhsim06G0199100' => 'rsi', 'Rhsim12G0062300' => 'rsi', 'Rhsim12G0062800' => 'rsi', 'Sabra02G0118600' => 'sbr', 'Sabra04G0027300' => 'sbr', 'Sabra04G0119500' => 'sbr', 'Sabra08G0112500' => 'sbr', 'Sabra11G0036800' => 'sbr', 'Sabra11G0103800' => 'sbr', 'Sabra13G0096300' => 'sbr', 'Sabra16G0262300' => 'sbr', 'Sabra18G0091700' => 'sbr', 'Sabra19G0095400' => 'sbr', 'SalBow6G3080' => 'sbo', 'SalBow7G1157' => 'sbo', 'SalBow7G2123' => 'sbo', 'SalBow7G2285' => 'sbo', 'SalBow7G3537' => 'sbo', 'SalBow8G2947' => 'sbo', 'SalBow8G4463' => 'sbo', 'SalBow8G5466' => 'sbo', 'Sc01g0001750' => 'sci', 'Sc02g0006640' => 'sci', 'Sc02g0006670' => 'sci', 'Sc04g0008220' => 'sci', 'Sc05g0006190' => 'sci', 'Sc08g0002760' => 'sci', 'Sc17g0006170' => 'sci', 'Sc22g0002050' => 'sci', 'Sc23g0001190' => 'sci', 'Sc24g0000980' => 'sci', 'Sed0006245' => 'sed', 'Sed0007543' => 'sed', 'Sed0009411' => 'sed', 'Sed0010765' => 'sed', 'Sed0012944' => 'sed', 'Sed0014682' => 'sed', 'Sed0016174' => 'sed', 'Sed0016796' => 'sed', 'Sed0020317' => 'sed', 'Sed0021467' => 'sed', 'SEGI_01316' => 'sgi', 'SEGI_03374' => 'sgi', 'SEGI_16265' => 'sgi', 'SEGI_18569' => 'sgi', 'SEGI_20351' => 'sgi', 'SEGI_26395' => 'sgi', 'SEGI_29469' => 'sgi', 'SEGI_34771' => 'sgi', 'SEGI_36769' => 'sgi', 'SEGI_37139' => 'sgi', 'SGA_v2.0_scaffold100G29687' => 'sas', 'SGA_v2.0_scaffold118G32472' => 'sas', 'SGA_v2.0_scaffold14G07051' => 'sas', 'SGA_v2.0_scaffold183G39845' => 'sas', 'SGA_v2.0_scaffold1G00174' => 'sas', 'SGA_v2.0_scaffold22G09714' => 'sas', 'SGA_v2.0_scaffold333G48992' => 'sas', 'SGA_v2.0_scaffold46G17491' => 'sas', 'SGA_v2.0_scaffold49G18294' => 'sas', 'SGA_v2.0_scaffold63G21658' => 'sas', 'SHI01741' => 'shi', 'SHI05771' => 'shi', 'SHI18077' => 'shi', 'SHI20525' => 'shi', 'SHI20527' => 'shi', 'SHI20528' => 'shi', 'SMO172G0185' => 'smo', 'SMO198G0020' => 'smo', 'SMO351G0006' => 'smo', 'SMO356G0118' => 'smo', 'SMO358G0296' => 'smo', 'SMO367G0079' => 'smo', 'SMO367G1277' => 'smo', 'Solyc01g014220.3' => 'sly', 'Solyc01g111770.2' => 'sly', 'Solyc02g078180.3' => 'sly', 'Solyc03g006430.3' => 'sly', 'Solyc03g006456.1' => 'sly', 'Solyc03g079860.2' => 'sly', 'Solyc04g079770.3' => 'sly', 'Solyc05g007430.4' => 'sly', 'Solyc07g063150.3' => 'sly', 'Solyc08g016620.3' => 'sly', 'Solyc09g057590.3' => 'sly', 'Solyc09g057600.1' => 'sly', 'Solyc10g009050.3' => 'sly', 'Solyc11g017420.2' => 'sly', 'Sopen01g053810' => 'spe', 'Sopen02g023040' => 'spe', 'Sopen03g002440' => 'spe', 'Sopen04g033350' => 'spe', 'Sopen05g003310' => 'spe', 'Sopen07g004050' => 'spe', 'Sopen07g031340' => 'spe', 'Sopen08g006990' => 'spe', 'Sopen10g004830' => 'spe', 'Sopen11g009370' => 'spe', 'Sp1g24450' => 'spa', 'Sp1g29670' => 'spa', 'Sp1g39600' => 'spa', 'Sp2g11080' => 'spa', 'Sp2g13970' => 'spa', 'Sp4g16130' => 'spa', 'Sp6g13080' => 'spa', 'Sp7g37270' => 'spa', 'TAR371G0065' => 'tar', 'TAR376G0340' => 'tar', 'TAR376G0435' => 'tar', 'TAR381G0002' => 'tar', 'TAR381G1236' => 'tar', 'TAR624G0055' => 'tar', 'TAR624G0324' => 'tar', 'TAR624G0696' => 'tar', 'TAR624G0906' => 'tar', 'TAR625G0107' => 'tar', 'TAR626G0015' => 'tar', 'TAR626G1356' => 'tar', 'TAR627G0888' => 'tar', 'TAR628G0399' => 'tar', 'TAR628G1327' => 'tar', 'TAR629G2831' => 'tar', 'TAR629G2874' => 'tar', 'TAR633G1432' => 'tar', 'TAR633G2771' => 'tar', 'THA.LOC104803394' => 'tha', 'THA.LOC104805153' => 'tha', 'THA.LOC104806784' => 'tha', 'THA.LOC104810473' => 'tha', 'THA.LOC104813100' => 'tha', 'THA.LOC104814215' => 'tha', 'THA.LOC104815554' => 'tha', 'THA.LOC104820544' => 'tha', 'THA.LOC104824754' => 'tha', 'THA.LOC104827717' => 'tha', 'Thecc.02G031400' => 'tca', 'Thecc.02G055900' => 'tca', 'Thecc.02G350800' => 'tca', 'Thecc.06G150900' => 'tca', 'Thecc.06G186600' => 'tca', 'Thecc.07G089600' => 'tca', 'Thecc.08G020400' => 'tca', 'Thecc.08G182100' => 'tca', 'Thhalv10000873m.g' => 'esa', 'Thhalv10004185m.g' => 'esa', 'Thhalv10006981m.g' => 'esa', 'Thhalv10007204m.g' => 'esa', 'Thhalv10011374m.g' => 'esa', 'Thhalv10013482m.g' => 'esa', 'Thhalv10017801m.g' => 'esa', 'Thhalv10024983m.g' => 'esa', 'TPR.G12072' => 'tpr', 'TPR.G15769' => 'tpr', 'TPR.G16504' => 'tpr', 'TPR.G16506' => 'tpr', 'TPR.G24345' => 'tpr', 'TPR.G26666' => 'tpr', 'TPR.G27320' => 'tpr', 'TPR.G31819' => 'tpr', 'TPR.G38879' => 'tpr', 'TPR.G39015' => 'tpr', 'TPR.G8819' => 'tpr', 'TWI09G0924' => 'twi', 'TWI12G0811' => 'twi', 'TWI12G1294' => 'twi', 'TWI31G0150' => 'twi', 'TWI36G1262' => 'twi', 'TWI38G1287' => 'twi', 'TWI38G1633' => 'twi', 'TWI38G1982' => 'twi', 'TWI39G0116' => 'twi', 'TWI60G1011' => 'twi', 'TWI63G0171' => 'twi', 'TWI73G0839' => 'twi', 'TWI79G1511' => 'twi', 'unitig_0.g915' => 'ugi', 'unitig_0.g916' => 'ugi', 'unitig_21.g20219' => 'ugi', 'unitig_21.g20416' => 'ugi', 'unitig_578.g16132' => 'ugi', 'unitig_578.g16718' => 'ugi', 'unitig_62.g23481' => 'ugi', 'unitig_744.g24535' => 'ugi', 'unitig_749.g13525' => 'ugi', 'vmacro01248' => 'vma', 'vmacro02290' => 'vma', 'vmacro10946' => 'vma', 'vmacro11865' => 'vma', 'vmacro12493' => 'vma', 'vmacro17322' => 'vma', 'vmacro21599' => 'vma', 'vmacro23041' => 'vma', 'VMungo0251G0004' => 'vmu', 'VMungo0251G2639' => 'vmu', 'VMungo0251G2967' => 'vmu', 'VMungo0540G0864' => 'vmu', 'VMungo0540G1569' => 'vmu', 'VMungo0647G0317' => 'vmu', 'VMungo0720G1373' => 'vmu', 'VMungo0720G1508' => 'vmu', 'VMungo1080G0485' => 'vmu', 'VMungo1215G3177' => 'vmu', 'Zm00001eb112600' => 'zma', 'Zm00001eb120220' => 'zma', 'Zm00001eb153240' => 'zma', 'Zm00001eb168880' => 'zma', 'Zm00001eb213920' => 'zma', 'Zm00001eb228280' => 'zma', 'Zm00001eb254580' => 'zma', 'Zm00001eb272180' => 'zma', 'Zm00001eb293190' => 'zma', 'Zm00001eb322930' => 'zma', 'Zm00001eb353360' => 'zma', 'Zm00001eb353390' => 'zma', 'Zm00001eb353430' => 'zma', 'Zm00001eb353440' => 'zma', 'Zm00001eb353780' => 'zma' ), 'gf_id' => 'HOM05D000499', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000499' ), 'data_identifier' => 'HOM05D000499', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000499', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1066', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p29780' => 'bna', 'A02p33180' => 'bna', 'A03p16470' => 'bna', 'A03p66010' => 'bna', 'A04p25970' => 'bna', 'A06p01270' => 'bna', 'A06p46080' => 'bna', 'A07p11400' => 'bna', 'A08p01840' => 'bna', 'A08p08230' => 'bna', 'A08p25740' => 'bna', 'A09p32070' => 'bna', 'A09p37830' => 'bna', 'A09p42840' => 'bna', 'A09p42850' => 'bna', 'Aa31LG10G2060' => 'aar', 'Aa31LG2G7410' => 'aar', 'Aa31LG6G10200' => 'aar', 'Aa31LG6G16680' => 'aar', 'Aa31LG6G8470' => 'aar', 'Aa31LG9G12730' => 'aar', 'Aa31LG9G13680' => 'aar', 'Aa31LG9G14920' => 'aar', 'Aa31LG9G6650' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4977' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5467' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3254' => 'aag', 'Actinidia02578' => 'ach', 'Actinidia07693' => 'ach', 'Actinidia08413' => 'ach', 'Actinidia08414' => 'ach', 'Actinidia15289' => 'ach', 'Actinidia19871' => 'ach', 'Actinidia21475' => 'ach', 'Actinidia22576' => 'ach', 'Actinidia28327' => 'ach', 'Actinidia32491' => 'ach', 'Actinidia39463' => 'ach', 'Actinidia39571' => 'ach', 'Ah.01g013750' => 'amhyb', 'Ah.01g023210' => 'amhyb', 'Ah.04g164850' => 'amhyb', 'Ah.05g178060' => 'amhyb', 'Ah.07g204270' => 'amhyb', 'Ah.07g208480' => 'amhyb', 'Ah.09g237410' => 'amhyb', 'Ah.14g089460' => 'amhyb', 'AL1G41790' => 'aly', 'AL1G49050' => 'aly', 'AL1G53810' => 'aly', 'AL1G61400' => 'aly', 'AL4G18580' => 'aly', 'AL5G12510' => 'aly', 'AL5G12540' => 'aly', 'AL6G43230' => 'aly', 'AL7G10370' => 'aly', 'AL7G19250' => 'aly', 'AL8G12240' => 'aly', 'AL8G18540' => 'aly', 'Aqoxy1G02409' => 'aox', 'Aqoxy2G03993' => 'aox', 'Aqoxy3G03357' => 'aox', 'Aqoxy4G00785' => 'aox', 'Aqoxy5G02598' => 'aox', 'Aqoxy6G00132' => 'aox', 'Aqoxy7G01776' => 'aox', 'Aqoxy7G02316' => 'aox', 'Aqoxy7G03973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.12AFKW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B8730' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27IQR1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3F75VG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3RE0GA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41TCQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.527VTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FIR39' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5W8UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DA38EV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ63HS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H1I32C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HC27T5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4M8AP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7N3CZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9UVDZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LS1NQA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT1D4B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SKC4TM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCFV76' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF9Q1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQWD9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1ZM88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WE07RT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YCK7VH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJE6Q6' => 'arhy', 'AT1G28240' => 'ath', 'AT1G34550' => 'ath', 'AT1G53040' => 'ath', 'AT2G02910' => 'ath', 'AT4G09630' => 'ath', 'AT4G38500' => 'ath', 'AT5G42660' => 'ath', 'AT5G46220' => 'ath', 'ATR0152G026' => 'atr', 'ATR0564G343' => 'atr', 'ATR0706G151' => 'atr', 'ATR0733G207' => 'atr', 'ATR0751G234' => 'atr', 'ATR0807G048' => 'atr', 'ATR1091G084' => 'atr', 'Atru.chr10.1229' => 'acertr', 'Atru.chr10.1230' => 'acertr', 'Atru.chr10.1874' => 'acertr', 'Atru.chr11.1808' => 'acertr', 'Atru.chr13.1795' => 'acertr', 'Atru.chr13.570' => 'acertr', 'Atru.chr2.2608' => 'acertr', 'Atru.chr2.2609' => 'acertr', 'Atru.chr5.3428' => 'acertr', 'Atru.chr8.1171' => 'acertr', 'AUR62004651' => 'cqu', 'AUR62008675' => 'cqu', 'AUR62010014' => 'cqu', 'AUR62013004' => 'cqu', 'AUR62014825' => 'cqu', 'AUR62015015' => 'cqu', 'AUR62015151' => 'cqu', 'AUR62017020' => 'cqu', 'AUR62019422' => 'cqu', 'AUR62023570' => 'cqu', 'AUR62025571' => 'cqu', 'AUR62029098' => 'cqu', 'AUR62033863' => 'cqu', 'AUR62034296' => 'cqu', 'AUR62040075' => 'cqu', 'BcaB02g07334' => 'bca', 'BcaB02g10575' => 'bca', 'BcaB03g12119' => 'bca', 'BcaB03g12120' => 'bca', 'BcaB03g13945' => 'bca', 'BcaB04g17123' => 'bca', 'BcaB04g17867' => 'bca', 'BcaB04g19839' => 'bca', 'BcaB07g30317' => 'bca', 'BcaB07g32432' => 'bca', 'BcaB07g33362' => 'bca', 'BcaB08g36611' => 'bca', 'BcaC01g00028' => 'bca', 'BcaC01g01356' => 'bca', 'BcaC01g02034' => 'bca', 'BcaC01g06051' => 'bca', 'BcaC03g16839' => 'bca', 'BcaC03g17176' => 'bca', 'BcaC05g26829' => 'bca', 'BcaC06g31490' => 'bca', 'BcaC06g35344' => 'bca', 'BcaC06g36570' => 'bca', 'BcaC07g37537' => 'bca', 'BcaC08g43491' => 'bca', 'BcaC08g43773' => 'bca', 'BcaNung00234' => 'bca', 'BcaNung01982' => 'bca', 'BcaNung03707' => 'bca', 'BcaNung06454' => 'bca', 'BolC2t10762H' => 'bol', 'BolC2t11191H' => 'bol', 'BolC3t14322H' => 'bol', 'BolC3t19747H' => 'bol', 'BolC3t21425H' => 'bol', 'BolC4t27800H' => 'bol', 'BolC5t31423H' => 'bol', 'BolC6t35951H' => 'bol', 'BolC6t36282H' => 'bol', 'BolC7t40678H' => 'bol', 'BolC7t40679H' => 'bol', 'BolC7t42222H' => 'bol', 'BolC7t43492H' => 'bol', 'BolC7t46785H' => 'bol', 'BolC8t47853H' => 'bol', 'BolC9t56805H' => 'bol', 'BraA02t08000Z' => 'bra', 'BraA02t08341Z' => 'bra', 'BraA03t10936Z' => 'bra', 'BraA03t15657Z' => 'bra', 'BraA04t18100Z' => 'bra', 'BraA05t20523Z' => 'bra', 'BraA06t23353Z' => 'bra', 'BraA06t27473Z' => 'bra', 'BraA06t27769Z' => 'bra', 'BraA07t28928Z' => 'bra', 'BraA08t32236Z' => 'bra', 'BraA08t32841Z' => 'bra', 'BraA08t34524Z' => 'bra', 'BraA09t38742Z' => 'bra', 'BraA09t39295Z' => 'bra', 'C02p47180' => 'bna', 'C02p50990' => 'bna', 'C03p19360' => 'bna', 'C03p74950' => 'bna', 'C03p91000' => 'bna', 'C04p63260' => 'bna', 'C05p27050' => 'bna', 'C06p08750' => 'bna', 'C06p11490' => 'bna', 'C07p02820' => 'bna', 'C07p17180' => 'bna', 'C07p29440' => 'bna', 'C07p63730' => 'bna', 'C09p39260' => 'bna', 'CAN.G1164.34' => 'can', 'CAN.G1164.39' => 'can', 'CAN.G1530.3' => 'can', 'CAN.G162.61' => 'can', 'CAN.G176.6' => 'can', 'CAN.G289.49' => 'can', 'CAN.G370.21' => 'can', 'CAN.G370.22' => 'can', 'CAN.G371.117' => 'can', 'CAN.G58.37' => 'can', 'CAN.G588.98' => 'can', 'CANSAT21G2266' => 'cansat', 'CANSAT25G2799' => 'cansat', 'CANSAT35G0862' => 'cansat', 'CANSAT35G1704' => 'cansat', 'CANSAT35G1760' => 'cansat', 'CANSAT56G3971' => 'cansat', 'CANSAT56G4116' => 'cansat', 'CANSAT80G1259' => 'cansat', 'CARHR027730' => 'chi', 'CARHR033880' => 'chi', 'CARHR043270' => 'chi', 'CARHR145330' => 'chi', 'CARHR145340' => 'chi', 'CARHR175570' => 'chi', 'CARHR181570' => 'chi', 'CARHR258470' => 'chi', 'CARHR260490' => 'chi', 'CARHR294220' => 'chi', 'Carub.0001s2668' => 'cru', 'Carub.0001s3257' => 'cru', 'Carub.0001s4220' => 'cru', 'Carub.0005s0179' => 'cru', 'Carub.0006s2807' => 'cru', 'Carub.0007s0039' => 'cru', 'Carub.0008s0169' => 'cru', 'Carub.0008s0636' => 'cru', 'Ca_00338_v3' => 'car', 'Ca_00542_v3' => 'car', 'Ca_01844_v3' => 'car', 'Ca_10611_v3' => 'car', 'Ca_13326_v3' => 'car', 'Ca_17944_v3' => 'car', 'Ca_18546_v3' => 'car', 'Ca_24219_v3' => 'car', 'Ca_29972_v3' => 'car', 'CBR_g3681' => 'cbr', 'CBR_g40021' => 'cbr', 'Cc01_g08140' => 'ccan', 'Cc02_g13410' => 'ccan', 'Cc02_g37480' => 'ccan', 'Cc05_g12030' => 'ccan', 'Cc09_g03370' => 'ccan', 'Cc09_g10300' => 'ccan', 'Cc10_g03530' => 'ccan', 'Cc10_g11380' => 'ccan', 'CDE01G0176' => 'cde', 'CDE02G0675' => 'cde', 'CDE02G0942' => 'cde', 'CDE02G1153' => 'cde', 'CDE02G4177' => 'cde', 'CDE04G2117' => 'cde', 'CDE04G2736' => 'cde', 'CDE08G1161' => 'cde', 'CDE09G1238' => 'cde', 'Cfa000467' => 'cfa', 'Cfa000947' => 'cfa', 'Cfa004969' => 'cfa', 'Cfa005284' => 'cfa', 'Cfa008993' => 'cfa', 'Cfa018187' => 'cfa', 'Cfa018454' => 'cfa', 'Cfa020585' => 'cfa', 'Ciclev10000424m.g' => 'ccl', 'Ciclev10003605m.g' => 'ccl', 'Ciclev10007828m.g' => 'ccl', 'Ciclev10014620m.g' => 'ccl', 'Ciclev10015169m.g' => 'ccl', 'Ciclev10018291m.g' => 'ccl', 'Ciclev10028256m.g' => 'ccl', 'Ciclev10033822m.g' => 'ccl', 'CiPaw.05G060300' => 'cil', 'CiPaw.05G085000' => 'cil', 'CiPaw.06G083700' => 'cil', 'CiPaw.06G120300' => 'cil', 'CiPaw.09G060500' => 'cil', 'CiPaw.09G123800' => 'cil', 'CiPaw.11G169700' => 'cil', 'CiPaw.12G118300' => 'cil', 'CiPaw.15G071000' => 'cil', 'CiPaw.15G081900' => 'cil', 'ClCG01G024610' => 'cla', 'ClCG03G006070' => 'cla', 'ClCG05G019250' => 'cla', 'ClCG09G009500' => 'cla', 'ClCG11G008200' => 'cla', 'ClCG11G018080' => 'cla', 'COL.COLO4_17373' => 'col', 'COL.COLO4_22994' => 'col', 'COL.COLO4_26389' => 'col', 'COL.COLO4_27170' => 'col', 'COL.COLO4_31074' => 'col', 'COL.COLO4_31465' => 'col', 'COL.COLO4_36438' => 'col', 'COL.COLO4_36439' => 'col', 'Cpa.g.c38781' => 'cpa', 'Cpa.g.sc128.12' => 'cpa', 'Cpa.g.sc166.7' => 'cpa', 'Cpa.g.sc166.8' => 'cpa', 'Cpa.g.sc20.111' => 'cpa', 'Cpa.g.sc27.31' => 'cpa', 'Cpa.g.sc64.36' => 'cpa', 'Cpa.g.sc64.37' => 'cpa', 'Cpa.g.sc66.49' => 'cpa', 'Cpa.g.sc80.64' => 'cpa', 'CsaV3_1G012320' => 'csa', 'CsaV3_2G008480' => 'csa', 'CsaV3_2G033450' => 'csa', 'CsaV3_3G044830' => 'csa', 'CsaV3_4G033710' => 'csa', 'CsaV3_6G051730' => 'csa', 'CsaV3_7G025350' => 'csa', 'CSS0001067' => 'camsi', 'CSS0005996' => 'camsi', 'CSS0006590' => 'camsi', 'CSS0009673' => 'camsi', 'CSS0010201' => 'camsi', 'CSS0010549' => 'camsi', 'CSS0011364' => 'camsi', 'CSS0014473' => 'camsi', 'CSS0014961' => 'camsi', 'CSS0020191' => 'camsi', 'CSS0021165' => 'camsi', 'CSS0022306' => 'camsi', 'CSS0030591' => 'camsi', 'CSS0030696' => 'camsi', 'CSS0032653' => 'camsi', 'CSS0037487' => 'camsi', 'CSS0041102' => 'camsi', 'CSS0041261' => 'camsi', 'CSS0046246' => 'camsi', 'CSS0049256' => 'camsi', 'DCAR_004075' => 'dca', 'DCAR_011538' => 'dca', 'DCAR_019553' => 'dca', 'DCAR_020952' => 'dca', 'DCAR_021739' => 'dca', 'DCAR_027407' => 'dca', 'DCAR_027913' => 'dca', 'DCAR_028066' => 'dca', 'Dinv05899' => 'din', 'Dinv07563' => 'din', 'Dinv08010' => 'din', 'Dinv14125' => 'din', 'Dinv20172' => 'din', 'Dinv30743' => 'din', 'Dinv31229' => 'din', 'Dinv34162' => 'din', 'Dinv36028' => 'din', 'Dinv39368' => 'din', 'Dinv40565' => 'din', 'Dinv41706' => 'din', 'Duzib052G0089' => 'dzi', 'Duzib116G0641' => 'dzi', 'Duzib132G0069' => 'dzi', 'Duzib132G1219' => 'dzi', 'Duzib147G0278' => 'dzi', 'Duzib160G0480' => 'dzi', 'Duzib170G0661' => 'dzi', 'Duzib177G0591' => 'dzi', 'Duzib187G1353' => 'dzi', 'Duzib192G0858' => 'dzi', 'Duzib192G0883' => 'dzi', 'Duzib213G0506' => 'dzi', 'Duzib235G0289' => 'dzi', 'Duzib251G0422' => 'dzi', 'ECA232G3898' => 'eca', 'ECA233G5950' => 'eca', 'ECA234G1699' => 'eca', 'ECA234G2421' => 'eca', 'ECA236G0426' => 'eca', 'ECA236G4331' => 'eca', 'ECA248G2573' => 'eca', 'EL10Ac1g00077' => 'bvu', 'EL10Ac1g01746' => 'bvu', 'EL10Ac2g03464' => 'bvu', 'EL10Ac4g08176' => 'bvu', 'EL10Ac7g17521' => 'bvu', 'EL10Ac8g20386' => 'bvu', 'EL10Ac9g21343' => 'bvu', 'EL10Ac9g22688' => 'bvu', 'Eucgr.B03434' => 'egr', 'Eucgr.D00618' => 'egr', 'Eucgr.E02395' => 'egr', 'Eucgr.F01129' => 'egr', 'Eucgr.F02622' => 'egr', 'Eucgr.F04207' => 'egr', 'FAN01G0570' => 'fan', 'FAN03G3351' => 'fan', 'FAN06G3702' => 'fan', 'FAN07G2149' => 'fan', 'FAN10G3758' => 'fan', 'FAN11G1170' => 'fan', 'FAN11G2050' => 'fan', 'FAN11G2724' => 'fan', 'FAN12G1700' => 'fan', 'FAN12G2028' => 'fan', 'FAN15G1160' => 'fan', 'FAN15G3063' => 'fan', 'FAN16G2540' => 'fan', 'FAN16G3077' => 'fan', 'FAN16G3624' => 'fan', 'FAN17G0221' => 'fan', 'FAN20G2492' => 'fan', 'FAN20G2905' => 'fan', 'FAN21G0548' => 'fan', 'FAN21G1300' => 'fan', 'FAN22G0077' => 'fan', 'FAN22G1315' => 'fan', 'FAN24G1280' => 'fan', 'FAN24G1445' => 'fan', 'FAN24G3527' => 'fan', 'FAN25G0464' => 'fan', 'FAN25G2885' => 'fan', 'FAN25G3270' => 'fan', 'FAN27G1101' => 'fan', 'FAN27G2846' => 'fan', 'FAN27G3524' => 'fan', 'FvH4_2g11770' => 'fve', 'FvH4_2g15630' => 'fve', 'FvH4_3g05570' => 'fve', 'FvH4_3g09110' => 'fve', 'FvH4_3g19940' => 'fve', 'FvH4_4g04821' => 'fve', 'FvH4_4g31480' => 'fve', 'FvH4_7g01740' => 'fve', 'Glyma.05G130400' => 'gma', 'Glyma.05G156400' => 'gma', 'Glyma.07G197000' => 'gma', 'Glyma.08G085151' => 'gma', 'Glyma.08G114500' => 'gma', 'Glyma.08G300400' => 'gma', 'Glyma.10G215800' => 'gma', 'Glyma.12G224400' => 'gma', 'Glyma.13G179300' => 'gma', 'Glyma.13G218151' => 'gma', 'Glyma.13G238800' => 'gma', 'Glyma.13G276900' => 'gma', 'Glyma.14G078200' => 'gma', 'Glyma.15G074500' => 'gma', 'Glyma.15G094100' => 'gma', 'Glyma.17G247200' => 'gma', 'Glyma.18G120100' => 'gma', 'Glyma.20G176000' => 'gma', 'Gohir.A01G063600' => 'ghi', 'Gohir.A01G170301' => 'ghi', 'Gohir.A02G060500' => 'ghi', 'Gohir.A05G133850' => 'ghi', 'Gohir.A05G161400' => 'ghi', 'Gohir.A06G012900' => 'ghi', 'Gohir.A06G035901' => 'ghi', 'Gohir.A06G127100' => 'ghi', 'Gohir.A06G210500' => 'ghi', 'Gohir.A08G008650' => 'ghi', 'Gohir.A09G072700' => 'ghi', 'Gohir.A09G088301' => 'ghi', 'Gohir.A10G040600' => 'ghi', 'Gohir.A12G036300' => 'ghi', 'Gohir.A12G143350' => 'ghi', 'Gohir.A12G165500' => 'ghi', 'Gohir.A13G145700' => 'ghi', 'Gohir.D01G050000' => 'ghi', 'Gohir.D01G051366' => 'ghi', 'Gohir.D01G161350' => 'ghi', 'Gohir.D02G065900' => 'ghi', 'Gohir.D05G164200' => 'ghi', 'Gohir.D05G355500' => 'ghi', 'Gohir.D06G010400' => 'ghi', 'Gohir.D06G111250' => 'ghi', 'Gohir.D06G132000' => 'ghi', 'Gohir.D06G210500' => 'ghi', 'Gohir.D07G165675' => 'ghi', 'Gohir.D08G062240' => 'ghi', 'Gohir.D08G086101' => 'ghi', 'Gohir.D08G138060' => 'ghi', 'Gohir.D09G072300' => 'ghi', 'Gohir.D10G041400' => 'ghi', 'Gohir.D11G191020' => 'ghi', 'Gohir.D11G212066' => 'ghi', 'Gohir.D12G036300' => 'ghi', 'Gohir.D12G168600' => 'ghi', 'Gohir.D13G150600' => 'ghi', 'Gorai.001G057300' => 'gra', 'Gorai.002G069900' => 'gra', 'Gorai.002G200000' => 'gra', 'Gorai.003G067600' => 'gra', 'Gorai.005G074800' => 'gra', 'Gorai.006G087300' => 'gra', 'Gorai.008G037500' => 'gra', 'Gorai.008G181400' => 'gra', 'Gorai.009G169400' => 'gra', 'Gorai.009G387900' => 'gra', 'Gorai.010G013300' => 'gra', 'Gorai.010G153800' => 'gra', 'Gorai.010G255800' => 'gra', 'Gorai.011G043700' => 'gra', 'Gorai.011G198900' => 'gra', 'Gorai.013G168400' => 'gra', 'GSVIVG01005212001' => 'vvi', 'GSVIVG01006163001' => 'vvi', 'GSVIVG01009625001' => 'vvi', 'GSVIVG01014338001' => 'vvi', 'GSVIVG01020005001' => 'vvi', 'GSVIVG01021450001' => 'vvi', 'GSVIVG01023975001' => 'vvi', 'GSVIVG01034490001' => 'vvi', 'HanXRQChr04g0112071' => 'han', 'HanXRQChr05g0131151' => 'han', 'HanXRQChr09g0262371' => 'han', 'HanXRQChr09g0268401' => 'han', 'HanXRQChr10g0279241' => 'han', 'HanXRQChr10g0297961' => 'han', 'HanXRQChr11g0326231' => 'han', 'HanXRQChr11g0328471' => 'han', 'HanXRQChr16g0507941' => 'han', 'HanXRQChr17g0560211' => 'han', 'Haze_02108' => 'cav', 'Haze_02428' => 'cav', 'Haze_05593' => 'cav', 'Haze_06448' => 'cav', 'Haze_09427' => 'cav', 'Haze_12022' => 'cav', 'Haze_17612' => 'cav', 'Haze_17928' => 'cav', 'Hma1.2p1_0032F.1_g019250' => 'hma', 'Hma1.2p1_0163F.1_g072690' => 'hma', 'Hma1.2p1_0265F.1_g106710' => 'hma', 'Hma1.2p1_0286F.1_g113970' => 'hma', 'Hma1.2p1_0363F.1_g136640' => 'hma', 'Hma1.2p1_0584F.1_g183470' => 'hma', 'Hma1.2p1_0885F.1_g232570' => 'hma', 'HPP92_006022' => 'vpl', 'HPP92_007320' => 'vpl', 'HPP92_011521' => 'vpl', 'HPP92_019387' => 'vpl', 'HPP92_024038' => 'vpl', 'Hund05891' => 'sun', 'Hund06450' => 'sun', 'Hund12053' => 'sun', 'Hund16800' => 'sun', 'Hund21222' => 'sun', 'Hund22896' => 'sun', 'Hund23746' => 'sun', 'Hund27083' => 'sun', 'Lalb_Chr02g0141831' => 'lal', 'Lalb_Chr02g0141841' => 'lal', 'Lalb_Chr05g0220411' => 'lal', 'Lalb_Chr06g0162081' => 'lal', 'Lalb_Chr09g0327651' => 'lal', 'Lalb_Chr13g0295051' => 'lal', 'Lalb_Chr15g0086801' => 'lal', 'Lalb_Chr16g0383781' => 'lal', 'Lalb_Chr16g0383791' => 'lal', 'Lalb_Chr18g0055441' => 'lal', 'Lalb_Chr18g0059611' => 'lal', 'Lalb_Chr20g0109661' => 'lal', 'Lalb_Chr20g0109831' => 'lal', 'Lalb_Chr20g0121871' => 'lal', 'Lalb_Chr22g0355361' => 'lal', 'Lalb_Chr25g0286371' => 'lal', 'Lj1A1187G43' => 'lonja', 'Lj1A1205T50' => 'lonja', 'Lj1A800G33' => 'lonja', 'Lj1C1187T7' => 'lonja', 'Lj1C843T11' => 'lonja', 'Lj1g0010940' => 'lja', 'Lj2A288T69' => 'lonja', 'Lj3g0024276' => 'lja', 'Lj4A47T76' => 'lonja', 'Lj4g0005805' => 'lja', 'Lj4g0006097' => 'lja', 'Lj4g0008528' => 'lja', 'Lj4g0024907' => 'lja', 'Lj5g0012472' => 'lja', 'Lj5g0018648' => 'lja', 'Lj6C789G1' => 'lonja', 'Lj6g0004000' => 'lja', 'Lj7A292G67' => 'lonja', 'Lj7A292T64' => 'lonja', 'Lj9A400T58' => 'lonja', 'Lsat_1_v5_gn_1_126181' => 'lsa', 'Lsat_1_v5_gn_4_123041' => 'lsa', 'Lsat_1_v5_gn_4_133620' => 'lsa', 'Lsat_1_v5_gn_4_53221' => 'lsa', 'Lsat_1_v5_gn_4_71961' => 'lsa', 'Lsat_1_v5_gn_7_105241' => 'lsa', 'Lsat_1_v5_gn_7_21361' => 'lsa', 'Lsat_1_v5_gn_7_28860' => 'lsa', 'Lsat_1_v5_gn_7_31260' => 'lsa', 'Lsat_1_v5_gn_8_52801' => 'lsa', 'Manes.02G191400' => 'mes', 'Manes.03G110100' => 'mes', 'Manes.04G071100' => 'mes', 'Manes.05G100500' => 'mes', 'Manes.05G164700' => 'mes', 'Manes.15G087000' => 'mes', 'Manes.15G121500' => 'mes', 'Manes.16G028300' => 'mes', 'Manes.17G046100' => 'mes', 'Manes.17G069800' => 'mes', 'Manes.18G100500' => 'mes', 'Mapoly0002s0109' => 'mpo', 'Mapoly0024s0007' => 'mpo', 'Mapoly0089s0032' => 'mpo', 'MBI04_g42241_MAGBIO' => 'mbi', 'MBI05_g11988_MAGBIO' => 'mbi', 'MBI05_g35452_MAGBIO' => 'mbi', 'MBI07_g30179_MAGBIO' => 'mbi', 'MBI07_g35859_MAGBIO' => 'mbi', 'MBI07_g35860_MAGBIO' => 'mbi', 'MBI07_g37166_MAGBIO' => 'mbi', 'MBI08_g18172_MAGBIO' => 'mbi', 'MBI09_g08441_MAGBIO' => 'mbi', 'MBI13_g01676_MAGBIO' => 'mbi', 'MBI14_g42955_MAGBIO' => 'mbi', 'MBI16_g13161_MAGBIO' => 'mbi', 'MBI17_g27204_MAGBIO' => 'mbi', 'MBI19_g21595_MAGBIO' => 'mbi', 'MD00G1148400' => 'mdo', 'MD02G1301200' => 'mdo', 'MD03G1227800' => 'mdo', 'MD05G1041100' => 'mdo', 'MD05G1124800' => 'mdo', 'MD05G1284000' => 'mdo', 'MD05G1338800' => 'mdo', 'MD05G1338900' => 'mdo', 'MD07G1022800' => 'mdo', 'MD10G1047500' => 'mdo', 'MD10G1127500' => 'mdo', 'MD10G1262300' => 'mdo', 'MD10G1293800' => 'mdo', 'MD16G1074300' => 'mdo', 'Medtr1g021670' => 'mtr', 'Medtr1g096320' => 'mtr', 'Medtr2g013690' => 'mtr', 'Medtr2g019450' => 'mtr', 'Medtr2g085170' => 'mtr', 'Medtr4g088785' => 'mtr', 'Medtr8g055930' => 'mtr', 'Medtr8g085850' => 'mtr', 'MELO3C002605.2' => 'cme', 'MELO3C003891.2' => 'cme', 'MELO3C004012.2' => 'cme', 'MELO3C007134.2' => 'cme', 'MELO3C008118.2' => 'cme', 'MELO3C016700.2' => 'cme', 'MELO3C024127.2' => 'cme', 'MELO3C033361.2' => 'cme', 'MELO3C033362.2' => 'cme', 'Migut.C00430' => 'egut', 'Migut.C01246' => 'egut', 'Migut.E00101' => 'egut', 'Migut.H01486' => 'egut', 'Migut.H01939' => 'egut', 'Migut.K00360' => 'egut', 'Migut.M00910' => 'egut', 'Migut.M01139' => 'egut', 'Migut.N02677' => 'egut', 'MSTRG.13252' => 'ama', 'MSTRG.14701' => 'ama', 'MSTRG.1521' => 'ama', 'MSTRG.15884' => 'ama', 'MSTRG.16242' => 'ama', 'MSTRG.22285' => 'ama', 'MSTRG.22444' => 'ama', 'MSTRG.2349' => 'ama', 'MSTRG.26308' => 'ama', 'MSTRG.28296' => 'ama', 'MSTRG.9895' => 'ama', 'Nitab4.5_0000110g0060' => 'nta', 'Nitab4.5_0000420g0130' => 'nta', 'Nitab4.5_0000422g0030' => 'nta', 'Nitab4.5_0000560g0180' => 'nta', 'Nitab4.5_0000703g0100' => 'nta', 'Nitab4.5_0000786g0200' => 'nta', 'Nitab4.5_0001336g0020' => 'nta', 'Nitab4.5_0001796g0030' => 'nta', 'Nitab4.5_0003348g0060' => 'nta', 'Nitab4.5_0003698g0040' => 'nta', 'Nitab4.5_0003942g0090' => 'nta', 'Nitab4.5_0004775g0070' => 'nta', 'Nitab4.5_0004864g0030' => 'nta', 'Nitab4.5_0005615g0020' => 'nta', 'Nitab4.5_0009288g0030' => 'nta', 'Nitab4.5_0009341g0010' => 'nta', 'Nitab4.5_0009535g0010' => 'nta', 'Nn1g03995' => 'nnu', 'Nn1g04100' => 'nnu', 'Nn1g06530' => 'nnu', 'Nn3g16404' => 'nnu', 'Nn3g17212' => 'nnu', 'Nn3g20776' => 'nnu', 'Nn3g21923' => 'nnu', 'Nn5g27737' => 'nnu', 'Nn5g29461' => 'nnu', 'Nn7g38355' => 'nnu', 'Nn8g39873' => 'nnu', 'Oeu000548.2' => 'oeu', 'Oeu004672.1' => 'oeu', 'Oeu015605.2' => 'oeu', 'Oeu016092.1' => 'oeu', 'Oeu017879.3' => 'oeu', 'Oeu024910.1' => 'oeu', 'Oeu028965.1' => 'oeu', 'Oeu031269.1' => 'oeu', 'Oeu031270.1' => 'oeu', 'Oeu032535.1' => 'oeu', 'Oeu034151.1' => 'oeu', 'Oeu034152.1' => 'oeu', 'Oeu034588.2' => 'oeu', 'Oeu050846.1' => 'oeu', 'Oeu050849.2' => 'oeu', 'Oeu051063.2' => 'oeu', 'Oeu052368.1' => 'oeu', 'Oeu052370.1' => 'oeu', 'Os01g0210400' => 'osa', 'Os01g0304300' => 'osa', 'Os01g0749100' => 'osa', 'Os02g0745800' => 'osa', 'Os03g0769050' => 'osa', 'Os05g0531500' => 'osa', 'Os06g0724300' => 'osa', 'Os11g0198100' => 'osa', 'Peaxi162Scf00069g01425' => 'pax', 'Peaxi162Scf00280g00811' => 'pax', 'Peaxi162Scf00310g00615' => 'pax', 'Peaxi162Scf00362g00542' => 'pax', 'Peaxi162Scf00461g00310' => 'pax', 'Peaxi162Scf00530g00118' => 'pax', 'Peaxi162Scf00541g00057' => 'pax', 'Peaxi162Scf00661g00017' => 'pax', 'Peaxi162Scf00926g00027' => 'pax', 'Peaxi162Scf01064g00263' => 'pax', 'Peaxi162Scf01211g00135' => 'pax', 'PGR004G2336' => 'pgr', 'PGR042G0327' => 'pgr', 'PGR042G1957' => 'pgr', 'PGR042G2003' => 'pgr', 'PGR042G3929' => 'pgr', 'PGR083G1137' => 'pgr', 'PGR083G1364' => 'pgr', 'PGSC0003DMG400003381' => 'stu', 'PGSC0003DMG400003417' => 'stu', 'PGSC0003DMG400008981' => 'stu', 'PGSC0003DMG400012417' => 'stu', 'PGSC0003DMG400012823' => 'stu', 'PGSC0003DMG400016885' => 'stu', 'PGSC0003DMG400022812' => 'stu', 'PGSC0003DMG400029726' => 'stu', 'PGSC0003DMG401009243' => 'stu', 'PGSC0003DMG401031505' => 'stu', 'PGSC0003DMG402031505' => 'stu', 'Phvul.001G017600' => 'pvu', 'Phvul.002G193500' => 'pvu', 'Phvul.002G228900' => 'pvu', 'Phvul.002G236800' => 'pvu', 'Phvul.003G049500' => 'pvu', 'Phvul.005G072000' => 'pvu', 'Phvul.006G164800' => 'pvu', 'Phvul.006G185100' => 'pvu', 'Phvul.007G090000' => 'pvu', 'Potri.001G399800' => 'ptr', 'Potri.002G149900' => 'ptr', 'Potri.004G044100' => 'ptr', 'Potri.004G177600' => 'ptr', 'Potri.009G138000' => 'ptr', 'Potri.010G094000' => 'ptr', 'Potri.011G053000' => 'ptr', 'Potri.011G119300' => 'ptr', 'Potri.013G113700' => 'ptr', 'Potri.018G107800' => 'ptr', 'Potri.019G084100' => 'ptr', 'Pp3c14_23720' => 'ppa', 'Pp3c16_6340' => 'ppa', 'Pp3c23_13420' => 'ppa', 'Pp3c24_2740' => 'ppa', 'Pp3c25_860' => 'ppa', 'Pp3c8_21750' => 'ppa', 'Prupe.1G273000' => 'ppe', 'Prupe.1G273700' => 'ppe', 'Prupe.1G274100' => 'ppe', 'Prupe.2G023300' => 'ppe', 'Prupe.4G048000' => 'ppe', 'Prupe.4G080400' => 'ppe', 'Prupe.4G181200' => 'ppe', 'Prupe.8G056900' => 'ppe', 'Prupe.8G168700' => 'ppe', 'Psat1g189080' => 'psa', 'Psat1g204760' => 'psa', 'Psat4g175560' => 'psa', 'Psat4g177720' => 'psa', 'Psat5g244240' => 'psa', 'Psat6g010720' => 'psa', 'Psat6g187200' => 'psa', 'Psat7g072040' => 'psa', 'PSO017G3501' => 'pso', 'PSO063G2148' => 'pso', 'PSO063G5608' => 'pso', 'PSO210G6392' => 'pso', 'PSO541G2319' => 'pso', 'PSO541G2836' => 'pso', 'PSO541G4012' => 'pso', 'PSO541G6253' => 'pso', 'PSO675G0580' => 'pso', 'PSO675G0856' => 'pso', 'PSO675G5635' => 'pso', 'PSO675G9157' => 'pso', 'PSO832G1660' => 'pso', 'PSO832G1969' => 'pso', 'QL02p007186' => 'qlo', 'QL02p033904' => 'qlo', 'QL03p064391' => 'qlo', 'QL05p040593' => 'qlo', 'QL05p058242' => 'qlo', 'QL08p021825' => 'qlo', 'QL11p004981' => 'qlo', 'RcHm_v2.0_Chr1g0318301' => 'rch', 'RcHm_v2.0_Chr4g0418501' => 'rch', 'RcHm_v2.0_Chr4g0439971' => 'rch', 'RcHm_v2.0_Chr5g0008541' => 'rch', 'RcHm_v2.0_Chr5g0014101' => 'rch', 'RcHm_v2.0_Chr5g0014131' => 'rch', 'RcHm_v2.0_Chr5g0033621' => 'rch', 'RcHm_v2.0_Chr6g0272041' => 'rch', 'RcHm_v2.0_Chr6g0278831' => 'rch', 'Rhsim02G0130400' => 'rsi', 'Rhsim02G0171100' => 'rsi', 'Rhsim05G0053000' => 'rsi', 'Rhsim05G0053100' => 'rsi', 'Rhsim06G0096500' => 'rsi', 'Rhsim06G0096600' => 'rsi', 'Rhsim06G0199100' => 'rsi', 'Rhsim12G0062300' => 'rsi', 'Rhsim12G0062800' => 'rsi', 'Sabra02G0118600' => 'sbr', 'Sabra04G0027300' => 'sbr', 'Sabra04G0119500' => 'sbr', 'Sabra08G0112500' => 'sbr', 'Sabra11G0036800' => 'sbr', 'Sabra11G0103800' => 'sbr', 'Sabra13G0096300' => 'sbr', 'Sabra16G0262300' => 'sbr', 'Sabra18G0091700' => 'sbr', 'Sabra19G0095400' => 'sbr', 'SalBow6G3080' => 'sbo', 'SalBow7G1157' => 'sbo', 'SalBow7G2123' => 'sbo', 'SalBow7G2285' => 'sbo', 'SalBow7G3537' => 'sbo', 'SalBow8G2947' => 'sbo', 'SalBow8G4463' => 'sbo', 'SalBow8G5466' => 'sbo', 'Sc01g0001750' => 'sci', 'Sc02g0006640' => 'sci', 'Sc02g0006670' => 'sci', 'Sc04g0008220' => 'sci', 'Sc05g0006190' => 'sci', 'Sc08g0002760' => 'sci', 'Sc17g0006170' => 'sci', 'Sc22g0002050' => 'sci', 'Sc23g0001190' => 'sci', 'Sc24g0000980' => 'sci', 'Sed0006245' => 'sed', 'Sed0007543' => 'sed', 'Sed0009411' => 'sed', 'Sed0010765' => 'sed', 'Sed0012944' => 'sed', 'Sed0014682' => 'sed', 'Sed0016174' => 'sed', 'Sed0016796' => 'sed', 'Sed0020317' => 'sed', 'Sed0021467' => 'sed', 'SEGI_01316' => 'sgi', 'SEGI_03374' => 'sgi', 'SEGI_16265' => 'sgi', 'SEGI_18569' => 'sgi', 'SEGI_20351' => 'sgi', 'SEGI_26395' => 'sgi', 'SEGI_29469' => 'sgi', 'SEGI_34771' => 'sgi', 'SEGI_36769' => 'sgi', 'SEGI_37139' => 'sgi', 'SGA_v2.0_scaffold100G29687' => 'sas', 'SGA_v2.0_scaffold118G32472' => 'sas', 'SGA_v2.0_scaffold14G07051' => 'sas', 'SGA_v2.0_scaffold183G39845' => 'sas', 'SGA_v2.0_scaffold1G00174' => 'sas', 'SGA_v2.0_scaffold22G09714' => 'sas', 'SGA_v2.0_scaffold333G48992' => 'sas', 'SGA_v2.0_scaffold46G17491' => 'sas', 'SGA_v2.0_scaffold49G18294' => 'sas', 'SGA_v2.0_scaffold63G21658' => 'sas', 'SHI01741' => 'shi', 'SHI05771' => 'shi', 'SHI18077' => 'shi', 'SHI20525' => 'shi', 'SHI20527' => 'shi', 'SHI20528' => 'shi', 'SMO172G0185' => 'smo', 'SMO198G0020' => 'smo', 'SMO351G0006' => 'smo', 'SMO356G0118' => 'smo', 'SMO358G0296' => 'smo', 'SMO367G0079' => 'smo', 'SMO367G1277' => 'smo', 'Solyc01g014220.3' => 'sly', 'Solyc01g111770.2' => 'sly', 'Solyc02g078180.3' => 'sly', 'Solyc03g006430.3' => 'sly', 'Solyc03g006456.1' => 'sly', 'Solyc03g079860.2' => 'sly', 'Solyc04g079770.3' => 'sly', 'Solyc05g007430.4' => 'sly', 'Solyc07g063150.3' => 'sly', 'Solyc08g016620.3' => 'sly', 'Solyc09g057590.3' => 'sly', 'Solyc09g057600.1' => 'sly', 'Solyc10g009050.3' => 'sly', 'Solyc11g017420.2' => 'sly', 'Sopen01g053810' => 'spe', 'Sopen02g023040' => 'spe', 'Sopen03g002440' => 'spe', 'Sopen04g033350' => 'spe', 'Sopen05g003310' => 'spe', 'Sopen07g004050' => 'spe', 'Sopen07g031340' => 'spe', 'Sopen08g006990' => 'spe', 'Sopen10g004830' => 'spe', 'Sopen11g009370' => 'spe', 'Sp1g24450' => 'spa', 'Sp1g29670' => 'spa', 'Sp1g39600' => 'spa', 'Sp2g11080' => 'spa', 'Sp2g13970' => 'spa', 'Sp4g16130' => 'spa', 'Sp6g13080' => 'spa', 'Sp7g37270' => 'spa', 'TAR371G0065' => 'tar', 'TAR376G0340' => 'tar', 'TAR376G0435' => 'tar', 'TAR381G0002' => 'tar', 'TAR381G1236' => 'tar', 'TAR624G0055' => 'tar', 'TAR624G0324' => 'tar', 'TAR624G0696' => 'tar', 'TAR624G0906' => 'tar', 'TAR625G0107' => 'tar', 'TAR626G0015' => 'tar', 'TAR626G1356' => 'tar', 'TAR627G0888' => 'tar', 'TAR628G0399' => 'tar', 'TAR628G1327' => 'tar', 'TAR629G2831' => 'tar', 'TAR629G2874' => 'tar', 'TAR633G1432' => 'tar', 'TAR633G2771' => 'tar', 'THA.LOC104803394' => 'tha', 'THA.LOC104805153' => 'tha', 'THA.LOC104806784' => 'tha', 'THA.LOC104810473' => 'tha', 'THA.LOC104813100' => 'tha', 'THA.LOC104814215' => 'tha', 'THA.LOC104815554' => 'tha', 'THA.LOC104820544' => 'tha', 'THA.LOC104824754' => 'tha', 'THA.LOC104827717' => 'tha', 'Thecc.02G031400' => 'tca', 'Thecc.02G055900' => 'tca', 'Thecc.02G350800' => 'tca', 'Thecc.06G150900' => 'tca', 'Thecc.06G186600' => 'tca', 'Thecc.07G089600' => 'tca', 'Thecc.08G020400' => 'tca', 'Thecc.08G182100' => 'tca', 'Thhalv10000873m.g' => 'esa', 'Thhalv10004185m.g' => 'esa', 'Thhalv10006981m.g' => 'esa', 'Thhalv10007204m.g' => 'esa', 'Thhalv10011374m.g' => 'esa', 'Thhalv10013482m.g' => 'esa', 'Thhalv10017801m.g' => 'esa', 'Thhalv10024983m.g' => 'esa', 'TPR.G12072' => 'tpr', 'TPR.G15769' => 'tpr', 'TPR.G16504' => 'tpr', 'TPR.G16506' => 'tpr', 'TPR.G24345' => 'tpr', 'TPR.G26666' => 'tpr', 'TPR.G27320' => 'tpr', 'TPR.G31819' => 'tpr', 'TPR.G38879' => 'tpr', 'TPR.G39015' => 'tpr', 'TPR.G8819' => 'tpr', 'TWI09G0924' => 'twi', 'TWI12G0811' => 'twi', 'TWI12G1294' => 'twi', 'TWI31G0150' => 'twi', 'TWI36G1262' => 'twi', 'TWI38G1287' => 'twi', 'TWI38G1633' => 'twi', 'TWI38G1982' => 'twi', 'TWI39G0116' => 'twi', 'TWI60G1011' => 'twi', 'TWI63G0171' => 'twi', 'TWI73G0839' => 'twi', 'TWI79G1511' => 'twi', 'unitig_0.g915' => 'ugi', 'unitig_0.g916' => 'ugi', 'unitig_21.g20219' => 'ugi', 'unitig_21.g20416' => 'ugi', 'unitig_578.g16132' => 'ugi', 'unitig_578.g16718' => 'ugi', 'unitig_62.g23481' => 'ugi', 'unitig_744.g24535' => 'ugi', 'unitig_749.g13525' => 'ugi', 'vmacro01248' => 'vma', 'vmacro02290' => 'vma', 'vmacro10946' => 'vma', 'vmacro11865' => 'vma', 'vmacro12493' => 'vma', 'vmacro17322' => 'vma', 'vmacro21599' => 'vma', 'vmacro23041' => 'vma', 'VMungo0251G0004' => 'vmu', 'VMungo0251G2639' => 'vmu', 'VMungo0251G2967' => 'vmu', 'VMungo0540G0864' => 'vmu', 'VMungo0540G1569' => 'vmu', 'VMungo0647G0317' => 'vmu', 'VMungo0720G1373' => 'vmu', 'VMungo0720G1508' => 'vmu', 'VMungo1080G0485' => 'vmu', 'VMungo1215G3177' => 'vmu', 'Zm00001eb112600' => 'zma', 'Zm00001eb120220' => 'zma', 'Zm00001eb153240' => 'zma', 'Zm00001eb168880' => 'zma', 'Zm00001eb213920' => 'zma', 'Zm00001eb228280' => 'zma', 'Zm00001eb254580' => 'zma', 'Zm00001eb272180' => 'zma', 'Zm00001eb293190' => 'zma', 'Zm00001eb322930' => 'zma', 'Zm00001eb353360' => 'zma', 'Zm00001eb353390' => 'zma', 'Zm00001eb353430' => 'zma', 'Zm00001eb353440' => 'zma', 'Zm00001eb353780' => 'zma' ) $gf_id = 'HOM05D000499' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000499' ) $data_identifier = 'HOM05D000499' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 29, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 12, 'amhyb' => (int) 8, 'aly' => (int) 12, 'aox' => (int) 9, 'arhy' => (int) 26, 'ath' => (int) 8, 'atr' => (int) 7, 'acertr' => (int) 10, 'cqu' => (int) 15, 'bca' => (int) 29, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 11, 'cansat' => (int) 8, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 9, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 8, 'cpa' => (int) 10, 'csa' => (int) 7, 'camsi' => (int) 20, 'dca' => (int) 8, 'din' => (int) 12, 'dzi' => (int) 14, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 6, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 38, 'gra' => (int) 16, 'vvi' => (int) 8, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 5, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 11, 'lja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 11, 'mpo' => (int) 3, 'mbi' => (int) 14, 'mdo' => (int) 14, 'mtr' => (int) 8, 'cme' => (int) 9, 'egut' => (int) 9, 'ama' => (int) 11, 'nta' => (int) 17, 'nnu' => (int) 11, 'oeu' => (int) 18, 'osa' => (int) 8, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 6, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 9, 'rsi' => (int) 9, 'sbr' => (int) 10, 'sbo' => (int) 8, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 10, 'sas' => (int) 10, 'shi' => (int) 6, 'smo' => (int) 7, 'sly' => (int) 14, 'spe' => (int) 10, 'spa' => (int) 8, 'tar' => (int) 19, 'tha' => (int) 10, 'tca' => (int) 8, 'esa' => (int) 8, 'tpr' => (int) 11, 'twi' => (int) 13, 'ugi' => (int) 9, 'vma' => (int) 8, 'vmu' => (int) 10, 'zma' => (int) 15 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb353780' $species_info = array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ) $local_species = 'cla' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000499', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1066', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p29780' => 'bna', 'A02p33180' => 'bna', 'A03p16470' => 'bna', 'A03p66010' => 'bna', 'A04p25970' => 'bna', 'A06p01270' => 'bna', 'A06p46080' => 'bna', 'A07p11400' => 'bna', 'A08p01840' => 'bna', 'A08p08230' => 'bna', 'A08p25740' => 'bna', 'A09p32070' => 'bna', 'A09p37830' => 'bna', 'A09p42840' => 'bna', 'A09p42850' => 'bna', 'Aa31LG10G2060' => 'aar', 'Aa31LG2G7410' => 'aar', 'Aa31LG6G10200' => 'aar', 'Aa31LG6G16680' => 'aar', 'Aa31LG6G8470' => 'aar', 'Aa31LG9G12730' => 'aar', 'Aa31LG9G13680' => 'aar', 'Aa31LG9G14920' => 'aar', 'Aa31LG9G6650' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4977' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5467' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3254' => 'aag', 'Actinidia02578' => 'ach', 'Actinidia07693' => 'ach', 'Actinidia08413' => 'ach', 'Actinidia08414' => 'ach', 'Actinidia15289' => 'ach', 'Actinidia19871' => 'ach', 'Actinidia21475' => 'ach', 'Actinidia22576' => 'ach', 'Actinidia28327' => 'ach', 'Actinidia32491' => 'ach', 'Actinidia39463' => 'ach', 'Actinidia39571' => 'ach', 'Ah.01g013750' => 'amhyb', 'Ah.01g023210' => 'amhyb', 'Ah.04g164850' => 'amhyb', 'Ah.05g178060' => 'amhyb', 'Ah.07g204270' => 'amhyb', 'Ah.07g208480' => 'amhyb', 'Ah.09g237410' => 'amhyb', 'Ah.14g089460' => 'amhyb', 'AL1G41790' => 'aly', 'AL1G49050' => 'aly', 'AL1G53810' => 'aly', 'AL1G61400' => 'aly', 'AL4G18580' => 'aly', 'AL5G12510' => 'aly', 'AL5G12540' => 'aly', 'AL6G43230' => 'aly', 'AL7G10370' => 'aly', 'AL7G19250' => 'aly', 'AL8G12240' => 'aly', 'AL8G18540' => 'aly', 'Aqoxy1G02409' => 'aox', 'Aqoxy2G03993' => 'aox', 'Aqoxy3G03357' => 'aox', 'Aqoxy4G00785' => 'aox', 'Aqoxy5G02598' => 'aox', 'Aqoxy6G00132' => 'aox', 'Aqoxy7G01776' => 'aox', 'Aqoxy7G02316' => 'aox', 'Aqoxy7G03973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.12AFKW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B8730' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27IQR1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3F75VG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3RE0GA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41TCQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.527VTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FIR39' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5W8UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DA38EV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ63HS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H1I32C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HC27T5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4M8AP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7N3CZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9UVDZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LS1NQA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT1D4B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SKC4TM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCFV76' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF9Q1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQWD9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1ZM88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WE07RT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YCK7VH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJE6Q6' => 'arhy', 'AT1G28240' => 'ath', 'AT1G34550' => 'ath', 'AT1G53040' => 'ath', 'AT2G02910' => 'ath', 'AT4G09630' => 'ath', 'AT4G38500' => 'ath', 'AT5G42660' => 'ath', 'AT5G46220' => 'ath', 'ATR0152G026' => 'atr', 'ATR0564G343' => 'atr', 'ATR0706G151' => 'atr', 'ATR0733G207' => 'atr', 'ATR0751G234' => 'atr', 'ATR0807G048' => 'atr', 'ATR1091G084' => 'atr', 'Atru.chr10.1229' => 'acertr', 'Atru.chr10.1230' => 'acertr', 'Atru.chr10.1874' => 'acertr', 'Atru.chr11.1808' => 'acertr', 'Atru.chr13.1795' => 'acertr', 'Atru.chr13.570' => 'acertr', 'Atru.chr2.2608' => 'acertr', 'Atru.chr2.2609' => 'acertr', 'Atru.chr5.3428' => 'acertr', 'Atru.chr8.1171' => 'acertr', 'AUR62004651' => 'cqu', 'AUR62008675' => 'cqu', 'AUR62010014' => 'cqu', 'AUR62013004' => 'cqu', 'AUR62014825' => 'cqu', 'AUR62015015' => 'cqu', 'AUR62015151' => 'cqu', 'AUR62017020' => 'cqu', 'AUR62019422' => 'cqu', 'AUR62023570' => 'cqu', 'AUR62025571' => 'cqu', 'AUR62029098' => 'cqu', 'AUR62033863' => 'cqu', 'AUR62034296' => 'cqu', 'AUR62040075' => 'cqu', 'BcaB02g07334' => 'bca', 'BcaB02g10575' => 'bca', 'BcaB03g12119' => 'bca', 'BcaB03g12120' => 'bca', 'BcaB03g13945' => 'bca', 'BcaB04g17123' => 'bca', 'BcaB04g17867' => 'bca', 'BcaB04g19839' => 'bca', 'BcaB07g30317' => 'bca', 'BcaB07g32432' => 'bca', 'BcaB07g33362' => 'bca', 'BcaB08g36611' => 'bca', 'BcaC01g00028' => 'bca', 'BcaC01g01356' => 'bca', 'BcaC01g02034' => 'bca', 'BcaC01g06051' => 'bca', 'BcaC03g16839' => 'bca', 'BcaC03g17176' => 'bca', 'BcaC05g26829' => 'bca', 'BcaC06g31490' => 'bca', 'BcaC06g35344' => 'bca', 'BcaC06g36570' => 'bca', 'BcaC07g37537' => 'bca', 'BcaC08g43491' => 'bca', 'BcaC08g43773' => 'bca', 'BcaNung00234' => 'bca', 'BcaNung01982' => 'bca', 'BcaNung03707' => 'bca', 'BcaNung06454' => 'bca', 'BolC2t10762H' => 'bol', 'BolC2t11191H' => 'bol', 'BolC3t14322H' => 'bol', 'BolC3t19747H' => 'bol', 'BolC3t21425H' => 'bol', 'BolC4t27800H' => 'bol', 'BolC5t31423H' => 'bol', 'BolC6t35951H' => 'bol', 'BolC6t36282H' => 'bol', 'BolC7t40678H' => 'bol', 'BolC7t40679H' => 'bol', 'BolC7t42222H' => 'bol', 'BolC7t43492H' => 'bol', 'BolC7t46785H' => 'bol', 'BolC8t47853H' => 'bol', 'BolC9t56805H' => 'bol', 'BraA02t08000Z' => 'bra', 'BraA02t08341Z' => 'bra', 'BraA03t10936Z' => 'bra', 'BraA03t15657Z' => 'bra', 'BraA04t18100Z' => 'bra', 'BraA05t20523Z' => 'bra', 'BraA06t23353Z' => 'bra', 'BraA06t27473Z' => 'bra', 'BraA06t27769Z' => 'bra', 'BraA07t28928Z' => 'bra', 'BraA08t32236Z' => 'bra', 'BraA08t32841Z' => 'bra', 'BraA08t34524Z' => 'bra', 'BraA09t38742Z' => 'bra', 'BraA09t39295Z' => 'bra', 'C02p47180' => 'bna', 'C02p50990' => 'bna', 'C03p19360' => 'bna', 'C03p74950' => 'bna', 'C03p91000' => 'bna', 'C04p63260' => 'bna', 'C05p27050' => 'bna', 'C06p08750' => 'bna', 'C06p11490' => 'bna', 'C07p02820' => 'bna', 'C07p17180' => 'bna', 'C07p29440' => 'bna', 'C07p63730' => 'bna', 'C09p39260' => 'bna', 'CAN.G1164.34' => 'can', 'CAN.G1164.39' => 'can', 'CAN.G1530.3' => 'can', 'CAN.G162.61' => 'can', 'CAN.G176.6' => 'can', 'CAN.G289.49' => 'can', 'CAN.G370.21' => 'can', 'CAN.G370.22' => 'can', 'CAN.G371.117' => 'can', 'CAN.G58.37' => 'can', 'CAN.G588.98' => 'can', 'CANSAT21G2266' => 'cansat', 'CANSAT25G2799' => 'cansat', 'CANSAT35G0862' => 'cansat', 'CANSAT35G1704' => 'cansat', 'CANSAT35G1760' => 'cansat', 'CANSAT56G3971' => 'cansat', 'CANSAT56G4116' => 'cansat', 'CANSAT80G1259' => 'cansat', 'CARHR027730' => 'chi', 'CARHR033880' => 'chi', 'CARHR043270' => 'chi', 'CARHR145330' => 'chi', 'CARHR145340' => 'chi', 'CARHR175570' => 'chi', 'CARHR181570' => 'chi', 'CARHR258470' => 'chi', 'CARHR260490' => 'chi', 'CARHR294220' => 'chi', 'Carub.0001s2668' => 'cru', 'Carub.0001s3257' => 'cru', 'Carub.0001s4220' => 'cru', 'Carub.0005s0179' => 'cru', 'Carub.0006s2807' => 'cru', 'Carub.0007s0039' => 'cru', 'Carub.0008s0169' => 'cru', 'Carub.0008s0636' => 'cru', 'Ca_00338_v3' => 'car', 'Ca_00542_v3' => 'car', 'Ca_01844_v3' => 'car', 'Ca_10611_v3' => 'car', 'Ca_13326_v3' => 'car', 'Ca_17944_v3' => 'car', 'Ca_18546_v3' => 'car', 'Ca_24219_v3' => 'car', 'Ca_29972_v3' => 'car', 'CBR_g3681' => 'cbr', 'CBR_g40021' => 'cbr', 'Cc01_g08140' => 'ccan', 'Cc02_g13410' => 'ccan', 'Cc02_g37480' => 'ccan', 'Cc05_g12030' => 'ccan', 'Cc09_g03370' => 'ccan', 'Cc09_g10300' => 'ccan', 'Cc10_g03530' => 'ccan', 'Cc10_g11380' => 'ccan', 'CDE01G0176' => 'cde', 'CDE02G0675' => 'cde', 'CDE02G0942' => 'cde', 'CDE02G1153' => 'cde', 'CDE02G4177' => 'cde', 'CDE04G2117' => 'cde', 'CDE04G2736' => 'cde', 'CDE08G1161' => 'cde', 'CDE09G1238' => 'cde', 'Cfa000467' => 'cfa', 'Cfa000947' => 'cfa', 'Cfa004969' => 'cfa', 'Cfa005284' => 'cfa', 'Cfa008993' => 'cfa', 'Cfa018187' => 'cfa', 'Cfa018454' => 'cfa', 'Cfa020585' => 'cfa', 'Ciclev10000424m.g' => 'ccl', 'Ciclev10003605m.g' => 'ccl', 'Ciclev10007828m.g' => 'ccl', 'Ciclev10014620m.g' => 'ccl', 'Ciclev10015169m.g' => 'ccl', 'Ciclev10018291m.g' => 'ccl', 'Ciclev10028256m.g' => 'ccl', 'Ciclev10033822m.g' => 'ccl', 'CiPaw.05G060300' => 'cil', 'CiPaw.05G085000' => 'cil', 'CiPaw.06G083700' => 'cil', 'CiPaw.06G120300' => 'cil', 'CiPaw.09G060500' => 'cil', 'CiPaw.09G123800' => 'cil', 'CiPaw.11G169700' => 'cil', 'CiPaw.12G118300' => 'cil', 'CiPaw.15G071000' => 'cil', 'CiPaw.15G081900' => 'cil', 'ClCG01G024610' => 'cla', 'ClCG03G006070' => 'cla', 'ClCG05G019250' => 'cla', 'ClCG09G009500' => 'cla', 'ClCG11G008200' => 'cla', 'ClCG11G018080' => 'cla', 'COL.COLO4_17373' => 'col', 'COL.COLO4_22994' => 'col', 'COL.COLO4_26389' => 'col', 'COL.COLO4_27170' => 'col', 'COL.COLO4_31074' => 'col', 'COL.COLO4_31465' => 'col', 'COL.COLO4_36438' => 'col', 'COL.COLO4_36439' => 'col', 'Cpa.g.c38781' => 'cpa', 'Cpa.g.sc128.12' => 'cpa', 'Cpa.g.sc166.7' => 'cpa', 'Cpa.g.sc166.8' => 'cpa', 'Cpa.g.sc20.111' => 'cpa', 'Cpa.g.sc27.31' => 'cpa', 'Cpa.g.sc64.36' => 'cpa', 'Cpa.g.sc64.37' => 'cpa', 'Cpa.g.sc66.49' => 'cpa', 'Cpa.g.sc80.64' => 'cpa', 'CsaV3_1G012320' => 'csa', 'CsaV3_2G008480' => 'csa', 'CsaV3_2G033450' => 'csa', 'CsaV3_3G044830' => 'csa', 'CsaV3_4G033710' => 'csa', 'CsaV3_6G051730' => 'csa', 'CsaV3_7G025350' => 'csa', 'CSS0001067' => 'camsi', 'CSS0005996' => 'camsi', 'CSS0006590' => 'camsi', 'CSS0009673' => 'camsi', 'CSS0010201' => 'camsi', 'CSS0010549' => 'camsi', 'CSS0011364' => 'camsi', 'CSS0014473' => 'camsi', 'CSS0014961' => 'camsi', 'CSS0020191' => 'camsi', 'CSS0021165' => 'camsi', 'CSS0022306' => 'camsi', 'CSS0030591' => 'camsi', 'CSS0030696' => 'camsi', 'CSS0032653' => 'camsi', 'CSS0037487' => 'camsi', 'CSS0041102' => 'camsi', 'CSS0041261' => 'camsi', 'CSS0046246' => 'camsi', 'CSS0049256' => 'camsi', 'DCAR_004075' => 'dca', 'DCAR_011538' => 'dca', 'DCAR_019553' => 'dca', 'DCAR_020952' => 'dca', 'DCAR_021739' => 'dca', 'DCAR_027407' => 'dca', 'DCAR_027913' => 'dca', 'DCAR_028066' => 'dca', 'Dinv05899' => 'din', 'Dinv07563' => 'din', 'Dinv08010' => 'din', 'Dinv14125' => 'din', 'Dinv20172' => 'din', 'Dinv30743' => 'din', 'Dinv31229' => 'din', 'Dinv34162' => 'din', 'Dinv36028' => 'din', 'Dinv39368' => 'din', 'Dinv40565' => 'din', 'Dinv41706' => 'din', 'Duzib052G0089' => 'dzi', 'Duzib116G0641' => 'dzi', 'Duzib132G0069' => 'dzi', 'Duzib132G1219' => 'dzi', 'Duzib147G0278' => 'dzi', 'Duzib160G0480' => 'dzi', 'Duzib170G0661' => 'dzi', 'Duzib177G0591' => 'dzi', 'Duzib187G1353' => 'dzi', 'Duzib192G0858' => 'dzi', 'Duzib192G0883' => 'dzi', 'Duzib213G0506' => 'dzi', 'Duzib235G0289' => 'dzi', 'Duzib251G0422' => 'dzi', 'ECA232G3898' => 'eca', 'ECA233G5950' => 'eca', 'ECA234G1699' => 'eca', 'ECA234G2421' => 'eca', 'ECA236G0426' => 'eca', 'ECA236G4331' => 'eca', 'ECA248G2573' => 'eca', 'EL10Ac1g00077' => 'bvu', 'EL10Ac1g01746' => 'bvu', 'EL10Ac2g03464' => 'bvu', 'EL10Ac4g08176' => 'bvu', 'EL10Ac7g17521' => 'bvu', 'EL10Ac8g20386' => 'bvu', 'EL10Ac9g21343' => 'bvu', 'EL10Ac9g22688' => 'bvu', 'Eucgr.B03434' => 'egr', 'Eucgr.D00618' => 'egr', 'Eucgr.E02395' => 'egr', 'Eucgr.F01129' => 'egr', 'Eucgr.F02622' => 'egr', 'Eucgr.F04207' => 'egr', 'FAN01G0570' => 'fan', 'FAN03G3351' => 'fan', 'FAN06G3702' => 'fan', 'FAN07G2149' => 'fan', 'FAN10G3758' => 'fan', 'FAN11G1170' => 'fan', 'FAN11G2050' => 'fan', 'FAN11G2724' => 'fan', 'FAN12G1700' => 'fan', 'FAN12G2028' => 'fan', 'FAN15G1160' => 'fan', 'FAN15G3063' => 'fan', 'FAN16G2540' => 'fan', 'FAN16G3077' => 'fan', 'FAN16G3624' => 'fan', 'FAN17G0221' => 'fan', 'FAN20G2492' => 'fan', 'FAN20G2905' => 'fan', 'FAN21G0548' => 'fan', 'FAN21G1300' => 'fan', 'FAN22G0077' => 'fan', 'FAN22G1315' => 'fan', 'FAN24G1280' => 'fan', 'FAN24G1445' => 'fan', 'FAN24G3527' => 'fan', 'FAN25G0464' => 'fan', 'FAN25G2885' => 'fan', 'FAN25G3270' => 'fan', 'FAN27G1101' => 'fan', 'FAN27G2846' => 'fan', 'FAN27G3524' => 'fan', 'FvH4_2g11770' => 'fve', 'FvH4_2g15630' => 'fve', 'FvH4_3g05570' => 'fve', 'FvH4_3g09110' => 'fve', 'FvH4_3g19940' => 'fve', 'FvH4_4g04821' => 'fve', 'FvH4_4g31480' => 'fve', 'FvH4_7g01740' => 'fve', 'Glyma.05G130400' => 'gma', 'Glyma.05G156400' => 'gma', 'Glyma.07G197000' => 'gma', 'Glyma.08G085151' => 'gma', 'Glyma.08G114500' => 'gma', 'Glyma.08G300400' => 'gma', 'Glyma.10G215800' => 'gma', 'Glyma.12G224400' => 'gma', 'Glyma.13G179300' => 'gma', 'Glyma.13G218151' => 'gma', 'Glyma.13G238800' => 'gma', 'Glyma.13G276900' => 'gma', 'Glyma.14G078200' => 'gma', 'Glyma.15G074500' => 'gma', 'Glyma.15G094100' => 'gma', 'Glyma.17G247200' => 'gma', 'Glyma.18G120100' => 'gma', 'Glyma.20G176000' => 'gma', 'Gohir.A01G063600' => 'ghi', 'Gohir.A01G170301' => 'ghi', 'Gohir.A02G060500' => 'ghi', 'Gohir.A05G133850' => 'ghi', 'Gohir.A05G161400' => 'ghi', 'Gohir.A06G012900' => 'ghi', 'Gohir.A06G035901' => 'ghi', 'Gohir.A06G127100' => 'ghi', 'Gohir.A06G210500' => 'ghi', 'Gohir.A08G008650' => 'ghi', 'Gohir.A09G072700' => 'ghi', 'Gohir.A09G088301' => 'ghi', 'Gohir.A10G040600' => 'ghi', 'Gohir.A12G036300' => 'ghi', 'Gohir.A12G143350' => 'ghi', 'Gohir.A12G165500' => 'ghi', 'Gohir.A13G145700' => 'ghi', 'Gohir.D01G050000' => 'ghi', 'Gohir.D01G051366' => 'ghi', 'Gohir.D01G161350' => 'ghi', 'Gohir.D02G065900' => 'ghi', 'Gohir.D05G164200' => 'ghi', 'Gohir.D05G355500' => 'ghi', 'Gohir.D06G010400' => 'ghi', 'Gohir.D06G111250' => 'ghi', 'Gohir.D06G132000' => 'ghi', 'Gohir.D06G210500' => 'ghi', 'Gohir.D07G165675' => 'ghi', 'Gohir.D08G062240' => 'ghi', 'Gohir.D08G086101' => 'ghi', 'Gohir.D08G138060' => 'ghi', 'Gohir.D09G072300' => 'ghi', 'Gohir.D10G041400' => 'ghi', 'Gohir.D11G191020' => 'ghi', 'Gohir.D11G212066' => 'ghi', 'Gohir.D12G036300' => 'ghi', 'Gohir.D12G168600' => 'ghi', 'Gohir.D13G150600' => 'ghi', 'Gorai.001G057300' => 'gra', 'Gorai.002G069900' => 'gra', 'Gorai.002G200000' => 'gra', 'Gorai.003G067600' => 'gra', 'Gorai.005G074800' => 'gra', 'Gorai.006G087300' => 'gra', 'Gorai.008G037500' => 'gra', 'Gorai.008G181400' => 'gra', 'Gorai.009G169400' => 'gra', 'Gorai.009G387900' => 'gra', 'Gorai.010G013300' => 'gra', 'Gorai.010G153800' => 'gra', 'Gorai.010G255800' => 'gra', 'Gorai.011G043700' => 'gra', 'Gorai.011G198900' => 'gra', 'Gorai.013G168400' => 'gra', 'GSVIVG01005212001' => 'vvi', 'GSVIVG01006163001' => 'vvi', 'GSVIVG01009625001' => 'vvi', 'GSVIVG01014338001' => 'vvi', 'GSVIVG01020005001' => 'vvi', 'GSVIVG01021450001' => 'vvi', 'GSVIVG01023975001' => 'vvi', 'GSVIVG01034490001' => 'vvi', 'HanXRQChr04g0112071' => 'han', 'HanXRQChr05g0131151' => 'han', 'HanXRQChr09g0262371' => 'han', 'HanXRQChr09g0268401' => 'han', 'HanXRQChr10g0279241' => 'han', 'HanXRQChr10g0297961' => 'han', 'HanXRQChr11g0326231' => 'han', 'HanXRQChr11g0328471' => 'han', 'HanXRQChr16g0507941' => 'han', 'HanXRQChr17g0560211' => 'han', 'Haze_02108' => 'cav', 'Haze_02428' => 'cav', 'Haze_05593' => 'cav', 'Haze_06448' => 'cav', 'Haze_09427' => 'cav', 'Haze_12022' => 'cav', 'Haze_17612' => 'cav', 'Haze_17928' => 'cav', 'Hma1.2p1_0032F.1_g019250' => 'hma', 'Hma1.2p1_0163F.1_g072690' => 'hma', 'Hma1.2p1_0265F.1_g106710' => 'hma', 'Hma1.2p1_0286F.1_g113970' => 'hma', 'Hma1.2p1_0363F.1_g136640' => 'hma', 'Hma1.2p1_0584F.1_g183470' => 'hma', 'Hma1.2p1_0885F.1_g232570' => 'hma', 'HPP92_006022' => 'vpl', 'HPP92_007320' => 'vpl', 'HPP92_011521' => 'vpl', 'HPP92_019387' => 'vpl', 'HPP92_024038' => 'vpl', 'Hund05891' => 'sun', 'Hund06450' => 'sun', 'Hund12053' => 'sun', 'Hund16800' => 'sun', 'Hund21222' => 'sun', 'Hund22896' => 'sun', 'Hund23746' => 'sun', 'Hund27083' => 'sun', 'Lalb_Chr02g0141831' => 'lal', 'Lalb_Chr02g0141841' => 'lal', 'Lalb_Chr05g0220411' => 'lal', 'Lalb_Chr06g0162081' => 'lal', 'Lalb_Chr09g0327651' => 'lal', 'Lalb_Chr13g0295051' => 'lal', 'Lalb_Chr15g0086801' => 'lal', 'Lalb_Chr16g0383781' => 'lal', 'Lalb_Chr16g0383791' => 'lal', 'Lalb_Chr18g0055441' => 'lal', 'Lalb_Chr18g0059611' => 'lal', 'Lalb_Chr20g0109661' => 'lal', 'Lalb_Chr20g0109831' => 'lal', 'Lalb_Chr20g0121871' => 'lal', 'Lalb_Chr22g0355361' => 'lal', 'Lalb_Chr25g0286371' => 'lal', 'Lj1A1187G43' => 'lonja', 'Lj1A1205T50' => 'lonja', 'Lj1A800G33' => 'lonja', 'Lj1C1187T7' => 'lonja', 'Lj1C843T11' => 'lonja', 'Lj1g0010940' => 'lja', 'Lj2A288T69' => 'lonja', 'Lj3g0024276' => 'lja', 'Lj4A47T76' => 'lonja', 'Lj4g0005805' => 'lja', 'Lj4g0006097' => 'lja', 'Lj4g0008528' => 'lja', 'Lj4g0024907' => 'lja', 'Lj5g0012472' => 'lja', 'Lj5g0018648' => 'lja', 'Lj6C789G1' => 'lonja', 'Lj6g0004000' => 'lja', 'Lj7A292G67' => 'lonja', 'Lj7A292T64' => 'lonja', 'Lj9A400T58' => 'lonja', 'Lsat_1_v5_gn_1_126181' => 'lsa', 'Lsat_1_v5_gn_4_123041' => 'lsa', 'Lsat_1_v5_gn_4_133620' => 'lsa', 'Lsat_1_v5_gn_4_53221' => 'lsa', 'Lsat_1_v5_gn_4_71961' => 'lsa', 'Lsat_1_v5_gn_7_105241' => 'lsa', 'Lsat_1_v5_gn_7_21361' => 'lsa', 'Lsat_1_v5_gn_7_28860' => 'lsa', 'Lsat_1_v5_gn_7_31260' => 'lsa', 'Lsat_1_v5_gn_8_52801' => 'lsa', 'Manes.02G191400' => 'mes', 'Manes.03G110100' => 'mes', 'Manes.04G071100' => 'mes', 'Manes.05G100500' => 'mes', 'Manes.05G164700' => 'mes', 'Manes.15G087000' => 'mes', 'Manes.15G121500' => 'mes', 'Manes.16G028300' => 'mes', 'Manes.17G046100' => 'mes', 'Manes.17G069800' => 'mes', 'Manes.18G100500' => 'mes', 'Mapoly0002s0109' => 'mpo', 'Mapoly0024s0007' => 'mpo', 'Mapoly0089s0032' => 'mpo', 'MBI04_g42241_MAGBIO' => 'mbi', 'MBI05_g11988_MAGBIO' => 'mbi', 'MBI05_g35452_MAGBIO' => 'mbi', 'MBI07_g30179_MAGBIO' => 'mbi', 'MBI07_g35859_MAGBIO' => 'mbi', 'MBI07_g35860_MAGBIO' => 'mbi', 'MBI07_g37166_MAGBIO' => 'mbi', 'MBI08_g18172_MAGBIO' => 'mbi', 'MBI09_g08441_MAGBIO' => 'mbi', 'MBI13_g01676_MAGBIO' => 'mbi', 'MBI14_g42955_MAGBIO' => 'mbi', 'MBI16_g13161_MAGBIO' => 'mbi', 'MBI17_g27204_MAGBIO' => 'mbi', 'MBI19_g21595_MAGBIO' => 'mbi', 'MD00G1148400' => 'mdo', 'MD02G1301200' => 'mdo', 'MD03G1227800' => 'mdo', 'MD05G1041100' => 'mdo', 'MD05G1124800' => 'mdo', 'MD05G1284000' => 'mdo', 'MD05G1338800' => 'mdo', 'MD05G1338900' => 'mdo', 'MD07G1022800' => 'mdo', 'MD10G1047500' => 'mdo', 'MD10G1127500' => 'mdo', 'MD10G1262300' => 'mdo', 'MD10G1293800' => 'mdo', 'MD16G1074300' => 'mdo', 'Medtr1g021670' => 'mtr', 'Medtr1g096320' => 'mtr', 'Medtr2g013690' => 'mtr', 'Medtr2g019450' => 'mtr', 'Medtr2g085170' => 'mtr', 'Medtr4g088785' => 'mtr', 'Medtr8g055930' => 'mtr', 'Medtr8g085850' => 'mtr', 'MELO3C002605.2' => 'cme', 'MELO3C003891.2' => 'cme', 'MELO3C004012.2' => 'cme', 'MELO3C007134.2' => 'cme', 'MELO3C008118.2' => 'cme', 'MELO3C016700.2' => 'cme', 'MELO3C024127.2' => 'cme', 'MELO3C033361.2' => 'cme', 'MELO3C033362.2' => 'cme', 'Migut.C00430' => 'egut', 'Migut.C01246' => 'egut', 'Migut.E00101' => 'egut', 'Migut.H01486' => 'egut', 'Migut.H01939' => 'egut', 'Migut.K00360' => 'egut', 'Migut.M00910' => 'egut', 'Migut.M01139' => 'egut', 'Migut.N02677' => 'egut', 'MSTRG.13252' => 'ama', 'MSTRG.14701' => 'ama', 'MSTRG.1521' => 'ama', 'MSTRG.15884' => 'ama', 'MSTRG.16242' => 'ama', 'MSTRG.22285' => 'ama', 'MSTRG.22444' => 'ama', 'MSTRG.2349' => 'ama', 'MSTRG.26308' => 'ama', 'MSTRG.28296' => 'ama', 'MSTRG.9895' => 'ama', 'Nitab4.5_0000110g0060' => 'nta', 'Nitab4.5_0000420g0130' => 'nta', 'Nitab4.5_0000422g0030' => 'nta', 'Nitab4.5_0000560g0180' => 'nta', 'Nitab4.5_0000703g0100' => 'nta', 'Nitab4.5_0000786g0200' => 'nta', 'Nitab4.5_0001336g0020' => 'nta', 'Nitab4.5_0001796g0030' => 'nta', 'Nitab4.5_0003348g0060' => 'nta', 'Nitab4.5_0003698g0040' => 'nta', 'Nitab4.5_0003942g0090' => 'nta', 'Nitab4.5_0004775g0070' => 'nta', 'Nitab4.5_0004864g0030' => 'nta', 'Nitab4.5_0005615g0020' => 'nta', 'Nitab4.5_0009288g0030' => 'nta', 'Nitab4.5_0009341g0010' => 'nta', 'Nitab4.5_0009535g0010' => 'nta', 'Nn1g03995' => 'nnu', 'Nn1g04100' => 'nnu', 'Nn1g06530' => 'nnu', 'Nn3g16404' => 'nnu', 'Nn3g17212' => 'nnu', 'Nn3g20776' => 'nnu', 'Nn3g21923' => 'nnu', 'Nn5g27737' => 'nnu', 'Nn5g29461' => 'nnu', 'Nn7g38355' => 'nnu', 'Nn8g39873' => 'nnu', 'Oeu000548.2' => 'oeu', 'Oeu004672.1' => 'oeu', 'Oeu015605.2' => 'oeu', 'Oeu016092.1' => 'oeu', 'Oeu017879.3' => 'oeu', 'Oeu024910.1' => 'oeu', 'Oeu028965.1' => 'oeu', 'Oeu031269.1' => 'oeu', 'Oeu031270.1' => 'oeu', 'Oeu032535.1' => 'oeu', 'Oeu034151.1' => 'oeu', 'Oeu034152.1' => 'oeu', 'Oeu034588.2' => 'oeu', 'Oeu050846.1' => 'oeu', 'Oeu050849.2' => 'oeu', 'Oeu051063.2' => 'oeu', 'Oeu052368.1' => 'oeu', 'Oeu052370.1' => 'oeu', 'Os01g0210400' => 'osa', 'Os01g0304300' => 'osa', 'Os01g0749100' => 'osa', 'Os02g0745800' => 'osa', 'Os03g0769050' => 'osa', 'Os05g0531500' => 'osa', 'Os06g0724300' => 'osa', 'Os11g0198100' => 'osa', 'Peaxi162Scf00069g01425' => 'pax', 'Peaxi162Scf00280g00811' => 'pax', 'Peaxi162Scf00310g00615' => 'pax', 'Peaxi162Scf00362g00542' => 'pax', 'Peaxi162Scf00461g00310' => 'pax', 'Peaxi162Scf00530g00118' => 'pax', 'Peaxi162Scf00541g00057' => 'pax', 'Peaxi162Scf00661g00017' => 'pax', 'Peaxi162Scf00926g00027' => 'pax', 'Peaxi162Scf01064g00263' => 'pax', 'Peaxi162Scf01211g00135' => 'pax', 'PGR004G2336' => 'pgr', 'PGR042G0327' => 'pgr', 'PGR042G1957' => 'pgr', 'PGR042G2003' => 'pgr', 'PGR042G3929' => 'pgr', 'PGR083G1137' => 'pgr', 'PGR083G1364' => 'pgr', 'PGSC0003DMG400003381' => 'stu', 'PGSC0003DMG400003417' => 'stu', 'PGSC0003DMG400008981' => 'stu', 'PGSC0003DMG400012417' => 'stu', 'PGSC0003DMG400012823' => 'stu', 'PGSC0003DMG400016885' => 'stu', 'PGSC0003DMG400022812' => 'stu', 'PGSC0003DMG400029726' => 'stu', 'PGSC0003DMG401009243' => 'stu', 'PGSC0003DMG401031505' => 'stu', 'PGSC0003DMG402031505' => 'stu', 'Phvul.001G017600' => 'pvu', 'Phvul.002G193500' => 'pvu', 'Phvul.002G228900' => 'pvu', 'Phvul.002G236800' => 'pvu', 'Phvul.003G049500' => 'pvu', 'Phvul.005G072000' => 'pvu', 'Phvul.006G164800' => 'pvu', 'Phvul.006G185100' => 'pvu', 'Phvul.007G090000' => 'pvu', 'Potri.001G399800' => 'ptr', 'Potri.002G149900' => 'ptr', 'Potri.004G044100' => 'ptr', 'Potri.004G177600' => 'ptr', 'Potri.009G138000' => 'ptr', 'Potri.010G094000' => 'ptr', 'Potri.011G053000' => 'ptr', 'Potri.011G119300' => 'ptr', 'Potri.013G113700' => 'ptr', 'Potri.018G107800' => 'ptr', 'Potri.019G084100' => 'ptr', 'Pp3c14_23720' => 'ppa', 'Pp3c16_6340' => 'ppa', 'Pp3c23_13420' => 'ppa', 'Pp3c24_2740' => 'ppa', 'Pp3c25_860' => 'ppa', 'Pp3c8_21750' => 'ppa', 'Prupe.1G273000' => 'ppe', 'Prupe.1G273700' => 'ppe', 'Prupe.1G274100' => 'ppe', 'Prupe.2G023300' => 'ppe', 'Prupe.4G048000' => 'ppe', 'Prupe.4G080400' => 'ppe', 'Prupe.4G181200' => 'ppe', 'Prupe.8G056900' => 'ppe', 'Prupe.8G168700' => 'ppe', 'Psat1g189080' => 'psa', 'Psat1g204760' => 'psa', 'Psat4g175560' => 'psa', 'Psat4g177720' => 'psa', 'Psat5g244240' => 'psa', 'Psat6g010720' => 'psa', 'Psat6g187200' => 'psa', 'Psat7g072040' => 'psa', 'PSO017G3501' => 'pso', 'PSO063G2148' => 'pso', 'PSO063G5608' => 'pso', 'PSO210G6392' => 'pso', 'PSO541G2319' => 'pso', 'PSO541G2836' => 'pso', 'PSO541G4012' => 'pso', 'PSO541G6253' => 'pso', 'PSO675G0580' => 'pso', 'PSO675G0856' => 'pso', 'PSO675G5635' => 'pso', 'PSO675G9157' => 'pso', 'PSO832G1660' => 'pso', 'PSO832G1969' => 'pso', 'QL02p007186' => 'qlo', 'QL02p033904' => 'qlo', 'QL03p064391' => 'qlo', 'QL05p040593' => 'qlo', 'QL05p058242' => 'qlo', 'QL08p021825' => 'qlo', 'QL11p004981' => 'qlo', 'RcHm_v2.0_Chr1g0318301' => 'rch', 'RcHm_v2.0_Chr4g0418501' => 'rch', 'RcHm_v2.0_Chr4g0439971' => 'rch', 'RcHm_v2.0_Chr5g0008541' => 'rch', 'RcHm_v2.0_Chr5g0014101' => 'rch', 'RcHm_v2.0_Chr5g0014131' => 'rch', 'RcHm_v2.0_Chr5g0033621' => 'rch', 'RcHm_v2.0_Chr6g0272041' => 'rch', 'RcHm_v2.0_Chr6g0278831' => 'rch', 'Rhsim02G0130400' => 'rsi', 'Rhsim02G0171100' => 'rsi', 'Rhsim05G0053000' => 'rsi', 'Rhsim05G0053100' => 'rsi', 'Rhsim06G0096500' => 'rsi', 'Rhsim06G0096600' => 'rsi', 'Rhsim06G0199100' => 'rsi', 'Rhsim12G0062300' => 'rsi', 'Rhsim12G0062800' => 'rsi', 'Sabra02G0118600' => 'sbr', 'Sabra04G0027300' => 'sbr', 'Sabra04G0119500' => 'sbr', 'Sabra08G0112500' => 'sbr', 'Sabra11G0036800' => 'sbr', 'Sabra11G0103800' => 'sbr', 'Sabra13G0096300' => 'sbr', 'Sabra16G0262300' => 'sbr', 'Sabra18G0091700' => 'sbr', 'Sabra19G0095400' => 'sbr', 'SalBow6G3080' => 'sbo', 'SalBow7G1157' => 'sbo', 'SalBow7G2123' => 'sbo', 'SalBow7G2285' => 'sbo', 'SalBow7G3537' => 'sbo', 'SalBow8G2947' => 'sbo', 'SalBow8G4463' => 'sbo', 'SalBow8G5466' => 'sbo', 'Sc01g0001750' => 'sci', 'Sc02g0006640' => 'sci', 'Sc02g0006670' => 'sci', 'Sc04g0008220' => 'sci', 'Sc05g0006190' => 'sci', 'Sc08g0002760' => 'sci', 'Sc17g0006170' => 'sci', 'Sc22g0002050' => 'sci', 'Sc23g0001190' => 'sci', 'Sc24g0000980' => 'sci', 'Sed0006245' => 'sed', 'Sed0007543' => 'sed', 'Sed0009411' => 'sed', 'Sed0010765' => 'sed', 'Sed0012944' => 'sed', 'Sed0014682' => 'sed', 'Sed0016174' => 'sed', 'Sed0016796' => 'sed', 'Sed0020317' => 'sed', 'Sed0021467' => 'sed', 'SEGI_01316' => 'sgi', 'SEGI_03374' => 'sgi', 'SEGI_16265' => 'sgi', 'SEGI_18569' => 'sgi', 'SEGI_20351' => 'sgi', 'SEGI_26395' => 'sgi', 'SEGI_29469' => 'sgi', 'SEGI_34771' => 'sgi', 'SEGI_36769' => 'sgi', 'SEGI_37139' => 'sgi', 'SGA_v2.0_scaffold100G29687' => 'sas', 'SGA_v2.0_scaffold118G32472' => 'sas', 'SGA_v2.0_scaffold14G07051' => 'sas', 'SGA_v2.0_scaffold183G39845' => 'sas', 'SGA_v2.0_scaffold1G00174' => 'sas', 'SGA_v2.0_scaffold22G09714' => 'sas', 'SGA_v2.0_scaffold333G48992' => 'sas', 'SGA_v2.0_scaffold46G17491' => 'sas', 'SGA_v2.0_scaffold49G18294' => 'sas', 'SGA_v2.0_scaffold63G21658' => 'sas', 'SHI01741' => 'shi', 'SHI05771' => 'shi', 'SHI18077' => 'shi', 'SHI20525' => 'shi', 'SHI20527' => 'shi', 'SHI20528' => 'shi', 'SMO172G0185' => 'smo', 'SMO198G0020' => 'smo', 'SMO351G0006' => 'smo', 'SMO356G0118' => 'smo', 'SMO358G0296' => 'smo', 'SMO367G0079' => 'smo', 'SMO367G1277' => 'smo', 'Solyc01g014220.3' => 'sly', 'Solyc01g111770.2' => 'sly', 'Solyc02g078180.3' => 'sly', 'Solyc03g006430.3' => 'sly', 'Solyc03g006456.1' => 'sly', 'Solyc03g079860.2' => 'sly', 'Solyc04g079770.3' => 'sly', 'Solyc05g007430.4' => 'sly', 'Solyc07g063150.3' => 'sly', 'Solyc08g016620.3' => 'sly', 'Solyc09g057590.3' => 'sly', 'Solyc09g057600.1' => 'sly', 'Solyc10g009050.3' => 'sly', 'Solyc11g017420.2' => 'sly', 'Sopen01g053810' => 'spe', 'Sopen02g023040' => 'spe', 'Sopen03g002440' => 'spe', 'Sopen04g033350' => 'spe', 'Sopen05g003310' => 'spe', 'Sopen07g004050' => 'spe', 'Sopen07g031340' => 'spe', 'Sopen08g006990' => 'spe', 'Sopen10g004830' => 'spe', 'Sopen11g009370' => 'spe', 'Sp1g24450' => 'spa', 'Sp1g29670' => 'spa', 'Sp1g39600' => 'spa', 'Sp2g11080' => 'spa', 'Sp2g13970' => 'spa', 'Sp4g16130' => 'spa', 'Sp6g13080' => 'spa', 'Sp7g37270' => 'spa', 'TAR371G0065' => 'tar', 'TAR376G0340' => 'tar', 'TAR376G0435' => 'tar', 'TAR381G0002' => 'tar', 'TAR381G1236' => 'tar', 'TAR624G0055' => 'tar', 'TAR624G0324' => 'tar', 'TAR624G0696' => 'tar', 'TAR624G0906' => 'tar', 'TAR625G0107' => 'tar', 'TAR626G0015' => 'tar', 'TAR626G1356' => 'tar', 'TAR627G0888' => 'tar', 'TAR628G0399' => 'tar', 'TAR628G1327' => 'tar', 'TAR629G2831' => 'tar', 'TAR629G2874' => 'tar', 'TAR633G1432' => 'tar', 'TAR633G2771' => 'tar', 'THA.LOC104803394' => 'tha', 'THA.LOC104805153' => 'tha', 'THA.LOC104806784' => 'tha', 'THA.LOC104810473' => 'tha', 'THA.LOC104813100' => 'tha', 'THA.LOC104814215' => 'tha', 'THA.LOC104815554' => 'tha', 'THA.LOC104820544' => 'tha', 'THA.LOC104824754' => 'tha', 'THA.LOC104827717' => 'tha', 'Thecc.02G031400' => 'tca', 'Thecc.02G055900' => 'tca', 'Thecc.02G350800' => 'tca', 'Thecc.06G150900' => 'tca', 'Thecc.06G186600' => 'tca', 'Thecc.07G089600' => 'tca', 'Thecc.08G020400' => 'tca', 'Thecc.08G182100' => 'tca', 'Thhalv10000873m.g' => 'esa', 'Thhalv10004185m.g' => 'esa', 'Thhalv10006981m.g' => 'esa', 'Thhalv10007204m.g' => 'esa', 'Thhalv10011374m.g' => 'esa', 'Thhalv10013482m.g' => 'esa', 'Thhalv10017801m.g' => 'esa', 'Thhalv10024983m.g' => 'esa', 'TPR.G12072' => 'tpr', 'TPR.G15769' => 'tpr', 'TPR.G16504' => 'tpr', 'TPR.G16506' => 'tpr', 'TPR.G24345' => 'tpr', 'TPR.G26666' => 'tpr', 'TPR.G27320' => 'tpr', 'TPR.G31819' => 'tpr', 'TPR.G38879' => 'tpr', 'TPR.G39015' => 'tpr', 'TPR.G8819' => 'tpr', 'TWI09G0924' => 'twi', 'TWI12G0811' => 'twi', 'TWI12G1294' => 'twi', 'TWI31G0150' => 'twi', 'TWI36G1262' => 'twi', 'TWI38G1287' => 'twi', 'TWI38G1633' => 'twi', 'TWI38G1982' => 'twi', 'TWI39G0116' => 'twi', 'TWI60G1011' => 'twi', 'TWI63G0171' => 'twi', 'TWI73G0839' => 'twi', 'TWI79G1511' => 'twi', 'unitig_0.g915' => 'ugi', 'unitig_0.g916' => 'ugi', 'unitig_21.g20219' => 'ugi', 'unitig_21.g20416' => 'ugi', 'unitig_578.g16132' => 'ugi', 'unitig_578.g16718' => 'ugi', 'unitig_62.g23481' => 'ugi', 'unitig_744.g24535' => 'ugi', 'unitig_749.g13525' => 'ugi', 'vmacro01248' => 'vma', 'vmacro02290' => 'vma', 'vmacro10946' => 'vma', 'vmacro11865' => 'vma', 'vmacro12493' => 'vma', 'vmacro17322' => 'vma', 'vmacro21599' => 'vma', 'vmacro23041' => 'vma', 'VMungo0251G0004' => 'vmu', 'VMungo0251G2639' => 'vmu', 'VMungo0251G2967' => 'vmu', 'VMungo0540G0864' => 'vmu', 'VMungo0540G1569' => 'vmu', 'VMungo0647G0317' => 'vmu', 'VMungo0720G1373' => 'vmu', 'VMungo0720G1508' => 'vmu', 'VMungo1080G0485' => 'vmu', 'VMungo1215G3177' => 'vmu', 'Zm00001eb112600' => 'zma', 'Zm00001eb120220' => 'zma', 'Zm00001eb153240' => 'zma', 'Zm00001eb168880' => 'zma', 'Zm00001eb213920' => 'zma', 'Zm00001eb228280' => 'zma', 'Zm00001eb254580' => 'zma', 'Zm00001eb272180' => 'zma', 'Zm00001eb293190' => 'zma', 'Zm00001eb322930' => 'zma', 'Zm00001eb353360' => 'zma', 'Zm00001eb353390' => 'zma', 'Zm00001eb353430' => 'zma', 'Zm00001eb353440' => 'zma', 'Zm00001eb353780' => 'zma' ), 'gf_id' => 'HOM05D000499', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000499' ), 'data_identifier' => 'HOM05D000499', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000499', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1066', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p29780' => 'bna', 'A02p33180' => 'bna', 'A03p16470' => 'bna', 'A03p66010' => 'bna', 'A04p25970' => 'bna', 'A06p01270' => 'bna', 'A06p46080' => 'bna', 'A07p11400' => 'bna', 'A08p01840' => 'bna', 'A08p08230' => 'bna', 'A08p25740' => 'bna', 'A09p32070' => 'bna', 'A09p37830' => 'bna', 'A09p42840' => 'bna', 'A09p42850' => 'bna', 'Aa31LG10G2060' => 'aar', 'Aa31LG2G7410' => 'aar', 'Aa31LG6G10200' => 'aar', 'Aa31LG6G16680' => 'aar', 'Aa31LG6G8470' => 'aar', 'Aa31LG9G12730' => 'aar', 'Aa31LG9G13680' => 'aar', 'Aa31LG9G14920' => 'aar', 'Aa31LG9G6650' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4977' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5467' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3254' => 'aag', 'Actinidia02578' => 'ach', 'Actinidia07693' => 'ach', 'Actinidia08413' => 'ach', 'Actinidia08414' => 'ach', 'Actinidia15289' => 'ach', 'Actinidia19871' => 'ach', 'Actinidia21475' => 'ach', 'Actinidia22576' => 'ach', 'Actinidia28327' => 'ach', 'Actinidia32491' => 'ach', 'Actinidia39463' => 'ach', 'Actinidia39571' => 'ach', 'Ah.01g013750' => 'amhyb', 'Ah.01g023210' => 'amhyb', 'Ah.04g164850' => 'amhyb', 'Ah.05g178060' => 'amhyb', 'Ah.07g204270' => 'amhyb', 'Ah.07g208480' => 'amhyb', 'Ah.09g237410' => 'amhyb', 'Ah.14g089460' => 'amhyb', 'AL1G41790' => 'aly', 'AL1G49050' => 'aly', 'AL1G53810' => 'aly', 'AL1G61400' => 'aly', 'AL4G18580' => 'aly', 'AL5G12510' => 'aly', 'AL5G12540' => 'aly', 'AL6G43230' => 'aly', 'AL7G10370' => 'aly', 'AL7G19250' => 'aly', 'AL8G12240' => 'aly', 'AL8G18540' => 'aly', 'Aqoxy1G02409' => 'aox', 'Aqoxy2G03993' => 'aox', 'Aqoxy3G03357' => 'aox', 'Aqoxy4G00785' => 'aox', 'Aqoxy5G02598' => 'aox', 'Aqoxy6G00132' => 'aox', 'Aqoxy7G01776' => 'aox', 'Aqoxy7G02316' => 'aox', 'Aqoxy7G03973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.12AFKW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B8730' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27IQR1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3F75VG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3RE0GA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41TCQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.527VTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FIR39' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5W8UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DA38EV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ63HS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H1I32C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HC27T5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4M8AP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7N3CZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9UVDZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LS1NQA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT1D4B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SKC4TM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCFV76' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF9Q1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQWD9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1ZM88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WE07RT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YCK7VH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJE6Q6' => 'arhy', 'AT1G28240' => 'ath', 'AT1G34550' => 'ath', 'AT1G53040' => 'ath', 'AT2G02910' => 'ath', 'AT4G09630' => 'ath', 'AT4G38500' => 'ath', 'AT5G42660' => 'ath', 'AT5G46220' => 'ath', 'ATR0152G026' => 'atr', 'ATR0564G343' => 'atr', 'ATR0706G151' => 'atr', 'ATR0733G207' => 'atr', 'ATR0751G234' => 'atr', 'ATR0807G048' => 'atr', 'ATR1091G084' => 'atr', 'Atru.chr10.1229' => 'acertr', 'Atru.chr10.1230' => 'acertr', 'Atru.chr10.1874' => 'acertr', 'Atru.chr11.1808' => 'acertr', 'Atru.chr13.1795' => 'acertr', 'Atru.chr13.570' => 'acertr', 'Atru.chr2.2608' => 'acertr', 'Atru.chr2.2609' => 'acertr', 'Atru.chr5.3428' => 'acertr', 'Atru.chr8.1171' => 'acertr', 'AUR62004651' => 'cqu', 'AUR62008675' => 'cqu', 'AUR62010014' => 'cqu', 'AUR62013004' => 'cqu', 'AUR62014825' => 'cqu', 'AUR62015015' => 'cqu', 'AUR62015151' => 'cqu', 'AUR62017020' => 'cqu', 'AUR62019422' => 'cqu', 'AUR62023570' => 'cqu', 'AUR62025571' => 'cqu', 'AUR62029098' => 'cqu', 'AUR62033863' => 'cqu', 'AUR62034296' => 'cqu', 'AUR62040075' => 'cqu', 'BcaB02g07334' => 'bca', 'BcaB02g10575' => 'bca', 'BcaB03g12119' => 'bca', 'BcaB03g12120' => 'bca', 'BcaB03g13945' => 'bca', 'BcaB04g17123' => 'bca', 'BcaB04g17867' => 'bca', 'BcaB04g19839' => 'bca', 'BcaB07g30317' => 'bca', 'BcaB07g32432' => 'bca', 'BcaB07g33362' => 'bca', 'BcaB08g36611' => 'bca', 'BcaC01g00028' => 'bca', 'BcaC01g01356' => 'bca', 'BcaC01g02034' => 'bca', 'BcaC01g06051' => 'bca', 'BcaC03g16839' => 'bca', 'BcaC03g17176' => 'bca', 'BcaC05g26829' => 'bca', 'BcaC06g31490' => 'bca', 'BcaC06g35344' => 'bca', 'BcaC06g36570' => 'bca', 'BcaC07g37537' => 'bca', 'BcaC08g43491' => 'bca', 'BcaC08g43773' => 'bca', 'BcaNung00234' => 'bca', 'BcaNung01982' => 'bca', 'BcaNung03707' => 'bca', 'BcaNung06454' => 'bca', 'BolC2t10762H' => 'bol', 'BolC2t11191H' => 'bol', 'BolC3t14322H' => 'bol', 'BolC3t19747H' => 'bol', 'BolC3t21425H' => 'bol', 'BolC4t27800H' => 'bol', 'BolC5t31423H' => 'bol', 'BolC6t35951H' => 'bol', 'BolC6t36282H' => 'bol', 'BolC7t40678H' => 'bol', 'BolC7t40679H' => 'bol', 'BolC7t42222H' => 'bol', 'BolC7t43492H' => 'bol', 'BolC7t46785H' => 'bol', 'BolC8t47853H' => 'bol', 'BolC9t56805H' => 'bol', 'BraA02t08000Z' => 'bra', 'BraA02t08341Z' => 'bra', 'BraA03t10936Z' => 'bra', 'BraA03t15657Z' => 'bra', 'BraA04t18100Z' => 'bra', 'BraA05t20523Z' => 'bra', 'BraA06t23353Z' => 'bra', 'BraA06t27473Z' => 'bra', 'BraA06t27769Z' => 'bra', 'BraA07t28928Z' => 'bra', 'BraA08t32236Z' => 'bra', 'BraA08t32841Z' => 'bra', 'BraA08t34524Z' => 'bra', 'BraA09t38742Z' => 'bra', 'BraA09t39295Z' => 'bra', 'C02p47180' => 'bna', 'C02p50990' => 'bna', 'C03p19360' => 'bna', 'C03p74950' => 'bna', 'C03p91000' => 'bna', 'C04p63260' => 'bna', 'C05p27050' => 'bna', 'C06p08750' => 'bna', 'C06p11490' => 'bna', 'C07p02820' => 'bna', 'C07p17180' => 'bna', 'C07p29440' => 'bna', 'C07p63730' => 'bna', 'C09p39260' => 'bna', 'CAN.G1164.34' => 'can', 'CAN.G1164.39' => 'can', 'CAN.G1530.3' => 'can', 'CAN.G162.61' => 'can', 'CAN.G176.6' => 'can', 'CAN.G289.49' => 'can', 'CAN.G370.21' => 'can', 'CAN.G370.22' => 'can', 'CAN.G371.117' => 'can', 'CAN.G58.37' => 'can', 'CAN.G588.98' => 'can', 'CANSAT21G2266' => 'cansat', 'CANSAT25G2799' => 'cansat', 'CANSAT35G0862' => 'cansat', 'CANSAT35G1704' => 'cansat', 'CANSAT35G1760' => 'cansat', 'CANSAT56G3971' => 'cansat', 'CANSAT56G4116' => 'cansat', 'CANSAT80G1259' => 'cansat', 'CARHR027730' => 'chi', 'CARHR033880' => 'chi', 'CARHR043270' => 'chi', 'CARHR145330' => 'chi', 'CARHR145340' => 'chi', 'CARHR175570' => 'chi', 'CARHR181570' => 'chi', 'CARHR258470' => 'chi', 'CARHR260490' => 'chi', 'CARHR294220' => 'chi', 'Carub.0001s2668' => 'cru', 'Carub.0001s3257' => 'cru', 'Carub.0001s4220' => 'cru', 'Carub.0005s0179' => 'cru', 'Carub.0006s2807' => 'cru', 'Carub.0007s0039' => 'cru', 'Carub.0008s0169' => 'cru', 'Carub.0008s0636' => 'cru', 'Ca_00338_v3' => 'car', 'Ca_00542_v3' => 'car', 'Ca_01844_v3' => 'car', 'Ca_10611_v3' => 'car', 'Ca_13326_v3' => 'car', 'Ca_17944_v3' => 'car', 'Ca_18546_v3' => 'car', 'Ca_24219_v3' => 'car', 'Ca_29972_v3' => 'car', 'CBR_g3681' => 'cbr', 'CBR_g40021' => 'cbr', 'Cc01_g08140' => 'ccan', 'Cc02_g13410' => 'ccan', 'Cc02_g37480' => 'ccan', 'Cc05_g12030' => 'ccan', 'Cc09_g03370' => 'ccan', 'Cc09_g10300' => 'ccan', 'Cc10_g03530' => 'ccan', 'Cc10_g11380' => 'ccan', 'CDE01G0176' => 'cde', 'CDE02G0675' => 'cde', 'CDE02G0942' => 'cde', 'CDE02G1153' => 'cde', 'CDE02G4177' => 'cde', 'CDE04G2117' => 'cde', 'CDE04G2736' => 'cde', 'CDE08G1161' => 'cde', 'CDE09G1238' => 'cde', 'Cfa000467' => 'cfa', 'Cfa000947' => 'cfa', 'Cfa004969' => 'cfa', 'Cfa005284' => 'cfa', 'Cfa008993' => 'cfa', 'Cfa018187' => 'cfa', 'Cfa018454' => 'cfa', 'Cfa020585' => 'cfa', 'Ciclev10000424m.g' => 'ccl', 'Ciclev10003605m.g' => 'ccl', 'Ciclev10007828m.g' => 'ccl', 'Ciclev10014620m.g' => 'ccl', 'Ciclev10015169m.g' => 'ccl', 'Ciclev10018291m.g' => 'ccl', 'Ciclev10028256m.g' => 'ccl', 'Ciclev10033822m.g' => 'ccl', 'CiPaw.05G060300' => 'cil', 'CiPaw.05G085000' => 'cil', 'CiPaw.06G083700' => 'cil', 'CiPaw.06G120300' => 'cil', 'CiPaw.09G060500' => 'cil', 'CiPaw.09G123800' => 'cil', 'CiPaw.11G169700' => 'cil', 'CiPaw.12G118300' => 'cil', 'CiPaw.15G071000' => 'cil', 'CiPaw.15G081900' => 'cil', 'ClCG01G024610' => 'cla', 'ClCG03G006070' => 'cla', 'ClCG05G019250' => 'cla', 'ClCG09G009500' => 'cla', 'ClCG11G008200' => 'cla', 'ClCG11G018080' => 'cla', 'COL.COLO4_17373' => 'col', 'COL.COLO4_22994' => 'col', 'COL.COLO4_26389' => 'col', 'COL.COLO4_27170' => 'col', 'COL.COLO4_31074' => 'col', 'COL.COLO4_31465' => 'col', 'COL.COLO4_36438' => 'col', 'COL.COLO4_36439' => 'col', 'Cpa.g.c38781' => 'cpa', 'Cpa.g.sc128.12' => 'cpa', 'Cpa.g.sc166.7' => 'cpa', 'Cpa.g.sc166.8' => 'cpa', 'Cpa.g.sc20.111' => 'cpa', 'Cpa.g.sc27.31' => 'cpa', 'Cpa.g.sc64.36' => 'cpa', 'Cpa.g.sc64.37' => 'cpa', 'Cpa.g.sc66.49' => 'cpa', 'Cpa.g.sc80.64' => 'cpa', 'CsaV3_1G012320' => 'csa', 'CsaV3_2G008480' => 'csa', 'CsaV3_2G033450' => 'csa', 'CsaV3_3G044830' => 'csa', 'CsaV3_4G033710' => 'csa', 'CsaV3_6G051730' => 'csa', 'CsaV3_7G025350' => 'csa', 'CSS0001067' => 'camsi', 'CSS0005996' => 'camsi', 'CSS0006590' => 'camsi', 'CSS0009673' => 'camsi', 'CSS0010201' => 'camsi', 'CSS0010549' => 'camsi', 'CSS0011364' => 'camsi', 'CSS0014473' => 'camsi', 'CSS0014961' => 'camsi', 'CSS0020191' => 'camsi', 'CSS0021165' => 'camsi', 'CSS0022306' => 'camsi', 'CSS0030591' => 'camsi', 'CSS0030696' => 'camsi', 'CSS0032653' => 'camsi', 'CSS0037487' => 'camsi', 'CSS0041102' => 'camsi', 'CSS0041261' => 'camsi', 'CSS0046246' => 'camsi', 'CSS0049256' => 'camsi', 'DCAR_004075' => 'dca', 'DCAR_011538' => 'dca', 'DCAR_019553' => 'dca', 'DCAR_020952' => 'dca', 'DCAR_021739' => 'dca', 'DCAR_027407' => 'dca', 'DCAR_027913' => 'dca', 'DCAR_028066' => 'dca', 'Dinv05899' => 'din', 'Dinv07563' => 'din', 'Dinv08010' => 'din', 'Dinv14125' => 'din', 'Dinv20172' => 'din', 'Dinv30743' => 'din', 'Dinv31229' => 'din', 'Dinv34162' => 'din', 'Dinv36028' => 'din', 'Dinv39368' => 'din', 'Dinv40565' => 'din', 'Dinv41706' => 'din', 'Duzib052G0089' => 'dzi', 'Duzib116G0641' => 'dzi', 'Duzib132G0069' => 'dzi', 'Duzib132G1219' => 'dzi', 'Duzib147G0278' => 'dzi', 'Duzib160G0480' => 'dzi', 'Duzib170G0661' => 'dzi', 'Duzib177G0591' => 'dzi', 'Duzib187G1353' => 'dzi', 'Duzib192G0858' => 'dzi', 'Duzib192G0883' => 'dzi', 'Duzib213G0506' => 'dzi', 'Duzib235G0289' => 'dzi', 'Duzib251G0422' => 'dzi', 'ECA232G3898' => 'eca', 'ECA233G5950' => 'eca', 'ECA234G1699' => 'eca', 'ECA234G2421' => 'eca', 'ECA236G0426' => 'eca', 'ECA236G4331' => 'eca', 'ECA248G2573' => 'eca', 'EL10Ac1g00077' => 'bvu', 'EL10Ac1g01746' => 'bvu', 'EL10Ac2g03464' => 'bvu', 'EL10Ac4g08176' => 'bvu', 'EL10Ac7g17521' => 'bvu', 'EL10Ac8g20386' => 'bvu', 'EL10Ac9g21343' => 'bvu', 'EL10Ac9g22688' => 'bvu', 'Eucgr.B03434' => 'egr', 'Eucgr.D00618' => 'egr', 'Eucgr.E02395' => 'egr', 'Eucgr.F01129' => 'egr', 'Eucgr.F02622' => 'egr', 'Eucgr.F04207' => 'egr', 'FAN01G0570' => 'fan', 'FAN03G3351' => 'fan', 'FAN06G3702' => 'fan', 'FAN07G2149' => 'fan', 'FAN10G3758' => 'fan', 'FAN11G1170' => 'fan', 'FAN11G2050' => 'fan', 'FAN11G2724' => 'fan', 'FAN12G1700' => 'fan', 'FAN12G2028' => 'fan', 'FAN15G1160' => 'fan', 'FAN15G3063' => 'fan', 'FAN16G2540' => 'fan', 'FAN16G3077' => 'fan', 'FAN16G3624' => 'fan', 'FAN17G0221' => 'fan', 'FAN20G2492' => 'fan', 'FAN20G2905' => 'fan', 'FAN21G0548' => 'fan', 'FAN21G1300' => 'fan', 'FAN22G0077' => 'fan', 'FAN22G1315' => 'fan', 'FAN24G1280' => 'fan', 'FAN24G1445' => 'fan', 'FAN24G3527' => 'fan', 'FAN25G0464' => 'fan', 'FAN25G2885' => 'fan', 'FAN25G3270' => 'fan', 'FAN27G1101' => 'fan', 'FAN27G2846' => 'fan', 'FAN27G3524' => 'fan', 'FvH4_2g11770' => 'fve', 'FvH4_2g15630' => 'fve', 'FvH4_3g05570' => 'fve', 'FvH4_3g09110' => 'fve', 'FvH4_3g19940' => 'fve', 'FvH4_4g04821' => 'fve', 'FvH4_4g31480' => 'fve', 'FvH4_7g01740' => 'fve', 'Glyma.05G130400' => 'gma', 'Glyma.05G156400' => 'gma', 'Glyma.07G197000' => 'gma', 'Glyma.08G085151' => 'gma', 'Glyma.08G114500' => 'gma', 'Glyma.08G300400' => 'gma', 'Glyma.10G215800' => 'gma', 'Glyma.12G224400' => 'gma', 'Glyma.13G179300' => 'gma', 'Glyma.13G218151' => 'gma', 'Glyma.13G238800' => 'gma', 'Glyma.13G276900' => 'gma', 'Glyma.14G078200' => 'gma', 'Glyma.15G074500' => 'gma', 'Glyma.15G094100' => 'gma', 'Glyma.17G247200' => 'gma', 'Glyma.18G120100' => 'gma', 'Glyma.20G176000' => 'gma', 'Gohir.A01G063600' => 'ghi', 'Gohir.A01G170301' => 'ghi', 'Gohir.A02G060500' => 'ghi', 'Gohir.A05G133850' => 'ghi', 'Gohir.A05G161400' => 'ghi', 'Gohir.A06G012900' => 'ghi', 'Gohir.A06G035901' => 'ghi', 'Gohir.A06G127100' => 'ghi', 'Gohir.A06G210500' => 'ghi', 'Gohir.A08G008650' => 'ghi', 'Gohir.A09G072700' => 'ghi', 'Gohir.A09G088301' => 'ghi', 'Gohir.A10G040600' => 'ghi', 'Gohir.A12G036300' => 'ghi', 'Gohir.A12G143350' => 'ghi', 'Gohir.A12G165500' => 'ghi', 'Gohir.A13G145700' => 'ghi', 'Gohir.D01G050000' => 'ghi', 'Gohir.D01G051366' => 'ghi', 'Gohir.D01G161350' => 'ghi', 'Gohir.D02G065900' => 'ghi', 'Gohir.D05G164200' => 'ghi', 'Gohir.D05G355500' => 'ghi', 'Gohir.D06G010400' => 'ghi', 'Gohir.D06G111250' => 'ghi', 'Gohir.D06G132000' => 'ghi', 'Gohir.D06G210500' => 'ghi', 'Gohir.D07G165675' => 'ghi', 'Gohir.D08G062240' => 'ghi', 'Gohir.D08G086101' => 'ghi', 'Gohir.D08G138060' => 'ghi', 'Gohir.D09G072300' => 'ghi', 'Gohir.D10G041400' => 'ghi', 'Gohir.D11G191020' => 'ghi', 'Gohir.D11G212066' => 'ghi', 'Gohir.D12G036300' => 'ghi', 'Gohir.D12G168600' => 'ghi', 'Gohir.D13G150600' => 'ghi', 'Gorai.001G057300' => 'gra', 'Gorai.002G069900' => 'gra', 'Gorai.002G200000' => 'gra', 'Gorai.003G067600' => 'gra', 'Gorai.005G074800' => 'gra', 'Gorai.006G087300' => 'gra', 'Gorai.008G037500' => 'gra', 'Gorai.008G181400' => 'gra', 'Gorai.009G169400' => 'gra', 'Gorai.009G387900' => 'gra', 'Gorai.010G013300' => 'gra', 'Gorai.010G153800' => 'gra', 'Gorai.010G255800' => 'gra', 'Gorai.011G043700' => 'gra', 'Gorai.011G198900' => 'gra', 'Gorai.013G168400' => 'gra', 'GSVIVG01005212001' => 'vvi', 'GSVIVG01006163001' => 'vvi', 'GSVIVG01009625001' => 'vvi', 'GSVIVG01014338001' => 'vvi', 'GSVIVG01020005001' => 'vvi', 'GSVIVG01021450001' => 'vvi', 'GSVIVG01023975001' => 'vvi', 'GSVIVG01034490001' => 'vvi', 'HanXRQChr04g0112071' => 'han', 'HanXRQChr05g0131151' => 'han', 'HanXRQChr09g0262371' => 'han', 'HanXRQChr09g0268401' => 'han', 'HanXRQChr10g0279241' => 'han', 'HanXRQChr10g0297961' => 'han', 'HanXRQChr11g0326231' => 'han', 'HanXRQChr11g0328471' => 'han', 'HanXRQChr16g0507941' => 'han', 'HanXRQChr17g0560211' => 'han', 'Haze_02108' => 'cav', 'Haze_02428' => 'cav', 'Haze_05593' => 'cav', 'Haze_06448' => 'cav', 'Haze_09427' => 'cav', 'Haze_12022' => 'cav', 'Haze_17612' => 'cav', 'Haze_17928' => 'cav', 'Hma1.2p1_0032F.1_g019250' => 'hma', 'Hma1.2p1_0163F.1_g072690' => 'hma', 'Hma1.2p1_0265F.1_g106710' => 'hma', 'Hma1.2p1_0286F.1_g113970' => 'hma', 'Hma1.2p1_0363F.1_g136640' => 'hma', 'Hma1.2p1_0584F.1_g183470' => 'hma', 'Hma1.2p1_0885F.1_g232570' => 'hma', 'HPP92_006022' => 'vpl', 'HPP92_007320' => 'vpl', 'HPP92_011521' => 'vpl', 'HPP92_019387' => 'vpl', 'HPP92_024038' => 'vpl', 'Hund05891' => 'sun', 'Hund06450' => 'sun', 'Hund12053' => 'sun', 'Hund16800' => 'sun', 'Hund21222' => 'sun', 'Hund22896' => 'sun', 'Hund23746' => 'sun', 'Hund27083' => 'sun', 'Lalb_Chr02g0141831' => 'lal', 'Lalb_Chr02g0141841' => 'lal', 'Lalb_Chr05g0220411' => 'lal', 'Lalb_Chr06g0162081' => 'lal', 'Lalb_Chr09g0327651' => 'lal', 'Lalb_Chr13g0295051' => 'lal', 'Lalb_Chr15g0086801' => 'lal', 'Lalb_Chr16g0383781' => 'lal', 'Lalb_Chr16g0383791' => 'lal', 'Lalb_Chr18g0055441' => 'lal', 'Lalb_Chr18g0059611' => 'lal', 'Lalb_Chr20g0109661' => 'lal', 'Lalb_Chr20g0109831' => 'lal', 'Lalb_Chr20g0121871' => 'lal', 'Lalb_Chr22g0355361' => 'lal', 'Lalb_Chr25g0286371' => 'lal', 'Lj1A1187G43' => 'lonja', 'Lj1A1205T50' => 'lonja', 'Lj1A800G33' => 'lonja', 'Lj1C1187T7' => 'lonja', 'Lj1C843T11' => 'lonja', 'Lj1g0010940' => 'lja', 'Lj2A288T69' => 'lonja', 'Lj3g0024276' => 'lja', 'Lj4A47T76' => 'lonja', 'Lj4g0005805' => 'lja', 'Lj4g0006097' => 'lja', 'Lj4g0008528' => 'lja', 'Lj4g0024907' => 'lja', 'Lj5g0012472' => 'lja', 'Lj5g0018648' => 'lja', 'Lj6C789G1' => 'lonja', 'Lj6g0004000' => 'lja', 'Lj7A292G67' => 'lonja', 'Lj7A292T64' => 'lonja', 'Lj9A400T58' => 'lonja', 'Lsat_1_v5_gn_1_126181' => 'lsa', 'Lsat_1_v5_gn_4_123041' => 'lsa', 'Lsat_1_v5_gn_4_133620' => 'lsa', 'Lsat_1_v5_gn_4_53221' => 'lsa', 'Lsat_1_v5_gn_4_71961' => 'lsa', 'Lsat_1_v5_gn_7_105241' => 'lsa', 'Lsat_1_v5_gn_7_21361' => 'lsa', 'Lsat_1_v5_gn_7_28860' => 'lsa', 'Lsat_1_v5_gn_7_31260' => 'lsa', 'Lsat_1_v5_gn_8_52801' => 'lsa', 'Manes.02G191400' => 'mes', 'Manes.03G110100' => 'mes', 'Manes.04G071100' => 'mes', 'Manes.05G100500' => 'mes', 'Manes.05G164700' => 'mes', 'Manes.15G087000' => 'mes', 'Manes.15G121500' => 'mes', 'Manes.16G028300' => 'mes', 'Manes.17G046100' => 'mes', 'Manes.17G069800' => 'mes', 'Manes.18G100500' => 'mes', 'Mapoly0002s0109' => 'mpo', 'Mapoly0024s0007' => 'mpo', 'Mapoly0089s0032' => 'mpo', 'MBI04_g42241_MAGBIO' => 'mbi', 'MBI05_g11988_MAGBIO' => 'mbi', 'MBI05_g35452_MAGBIO' => 'mbi', 'MBI07_g30179_MAGBIO' => 'mbi', 'MBI07_g35859_MAGBIO' => 'mbi', 'MBI07_g35860_MAGBIO' => 'mbi', 'MBI07_g37166_MAGBIO' => 'mbi', 'MBI08_g18172_MAGBIO' => 'mbi', 'MBI09_g08441_MAGBIO' => 'mbi', 'MBI13_g01676_MAGBIO' => 'mbi', 'MBI14_g42955_MAGBIO' => 'mbi', 'MBI16_g13161_MAGBIO' => 'mbi', 'MBI17_g27204_MAGBIO' => 'mbi', 'MBI19_g21595_MAGBIO' => 'mbi', 'MD00G1148400' => 'mdo', 'MD02G1301200' => 'mdo', 'MD03G1227800' => 'mdo', 'MD05G1041100' => 'mdo', 'MD05G1124800' => 'mdo', 'MD05G1284000' => 'mdo', 'MD05G1338800' => 'mdo', 'MD05G1338900' => 'mdo', 'MD07G1022800' => 'mdo', 'MD10G1047500' => 'mdo', 'MD10G1127500' => 'mdo', 'MD10G1262300' => 'mdo', 'MD10G1293800' => 'mdo', 'MD16G1074300' => 'mdo', 'Medtr1g021670' => 'mtr', 'Medtr1g096320' => 'mtr', 'Medtr2g013690' => 'mtr', 'Medtr2g019450' => 'mtr', 'Medtr2g085170' => 'mtr', 'Medtr4g088785' => 'mtr', 'Medtr8g055930' => 'mtr', 'Medtr8g085850' => 'mtr', 'MELO3C002605.2' => 'cme', 'MELO3C003891.2' => 'cme', 'MELO3C004012.2' => 'cme', 'MELO3C007134.2' => 'cme', 'MELO3C008118.2' => 'cme', 'MELO3C016700.2' => 'cme', 'MELO3C024127.2' => 'cme', 'MELO3C033361.2' => 'cme', 'MELO3C033362.2' => 'cme', 'Migut.C00430' => 'egut', 'Migut.C01246' => 'egut', 'Migut.E00101' => 'egut', 'Migut.H01486' => 'egut', 'Migut.H01939' => 'egut', 'Migut.K00360' => 'egut', 'Migut.M00910' => 'egut', 'Migut.M01139' => 'egut', 'Migut.N02677' => 'egut', 'MSTRG.13252' => 'ama', 'MSTRG.14701' => 'ama', 'MSTRG.1521' => 'ama', 'MSTRG.15884' => 'ama', 'MSTRG.16242' => 'ama', 'MSTRG.22285' => 'ama', 'MSTRG.22444' => 'ama', 'MSTRG.2349' => 'ama', 'MSTRG.26308' => 'ama', 'MSTRG.28296' => 'ama', 'MSTRG.9895' => 'ama', 'Nitab4.5_0000110g0060' => 'nta', 'Nitab4.5_0000420g0130' => 'nta', 'Nitab4.5_0000422g0030' => 'nta', 'Nitab4.5_0000560g0180' => 'nta', 'Nitab4.5_0000703g0100' => 'nta', 'Nitab4.5_0000786g0200' => 'nta', 'Nitab4.5_0001336g0020' => 'nta', 'Nitab4.5_0001796g0030' => 'nta', 'Nitab4.5_0003348g0060' => 'nta', 'Nitab4.5_0003698g0040' => 'nta', 'Nitab4.5_0003942g0090' => 'nta', 'Nitab4.5_0004775g0070' => 'nta', 'Nitab4.5_0004864g0030' => 'nta', 'Nitab4.5_0005615g0020' => 'nta', 'Nitab4.5_0009288g0030' => 'nta', 'Nitab4.5_0009341g0010' => 'nta', 'Nitab4.5_0009535g0010' => 'nta', 'Nn1g03995' => 'nnu', 'Nn1g04100' => 'nnu', 'Nn1g06530' => 'nnu', 'Nn3g16404' => 'nnu', 'Nn3g17212' => 'nnu', 'Nn3g20776' => 'nnu', 'Nn3g21923' => 'nnu', 'Nn5g27737' => 'nnu', 'Nn5g29461' => 'nnu', 'Nn7g38355' => 'nnu', 'Nn8g39873' => 'nnu', 'Oeu000548.2' => 'oeu', 'Oeu004672.1' => 'oeu', 'Oeu015605.2' => 'oeu', 'Oeu016092.1' => 'oeu', 'Oeu017879.3' => 'oeu', 'Oeu024910.1' => 'oeu', 'Oeu028965.1' => 'oeu', 'Oeu031269.1' => 'oeu', 'Oeu031270.1' => 'oeu', 'Oeu032535.1' => 'oeu', 'Oeu034151.1' => 'oeu', 'Oeu034152.1' => 'oeu', 'Oeu034588.2' => 'oeu', 'Oeu050846.1' => 'oeu', 'Oeu050849.2' => 'oeu', 'Oeu051063.2' => 'oeu', 'Oeu052368.1' => 'oeu', 'Oeu052370.1' => 'oeu', 'Os01g0210400' => 'osa', 'Os01g0304300' => 'osa', 'Os01g0749100' => 'osa', 'Os02g0745800' => 'osa', 'Os03g0769050' => 'osa', 'Os05g0531500' => 'osa', 'Os06g0724300' => 'osa', 'Os11g0198100' => 'osa', 'Peaxi162Scf00069g01425' => 'pax', 'Peaxi162Scf00280g00811' => 'pax', 'Peaxi162Scf00310g00615' => 'pax', 'Peaxi162Scf00362g00542' => 'pax', 'Peaxi162Scf00461g00310' => 'pax', 'Peaxi162Scf00530g00118' => 'pax', 'Peaxi162Scf00541g00057' => 'pax', 'Peaxi162Scf00661g00017' => 'pax', 'Peaxi162Scf00926g00027' => 'pax', 'Peaxi162Scf01064g00263' => 'pax', 'Peaxi162Scf01211g00135' => 'pax', 'PGR004G2336' => 'pgr', 'PGR042G0327' => 'pgr', 'PGR042G1957' => 'pgr', 'PGR042G2003' => 'pgr', 'PGR042G3929' => 'pgr', 'PGR083G1137' => 'pgr', 'PGR083G1364' => 'pgr', 'PGSC0003DMG400003381' => 'stu', 'PGSC0003DMG400003417' => 'stu', 'PGSC0003DMG400008981' => 'stu', 'PGSC0003DMG400012417' => 'stu', 'PGSC0003DMG400012823' => 'stu', 'PGSC0003DMG400016885' => 'stu', 'PGSC0003DMG400022812' => 'stu', 'PGSC0003DMG400029726' => 'stu', 'PGSC0003DMG401009243' => 'stu', 'PGSC0003DMG401031505' => 'stu', 'PGSC0003DMG402031505' => 'stu', 'Phvul.001G017600' => 'pvu', 'Phvul.002G193500' => 'pvu', 'Phvul.002G228900' => 'pvu', 'Phvul.002G236800' => 'pvu', 'Phvul.003G049500' => 'pvu', 'Phvul.005G072000' => 'pvu', 'Phvul.006G164800' => 'pvu', 'Phvul.006G185100' => 'pvu', 'Phvul.007G090000' => 'pvu', 'Potri.001G399800' => 'ptr', 'Potri.002G149900' => 'ptr', 'Potri.004G044100' => 'ptr', 'Potri.004G177600' => 'ptr', 'Potri.009G138000' => 'ptr', 'Potri.010G094000' => 'ptr', 'Potri.011G053000' => 'ptr', 'Potri.011G119300' => 'ptr', 'Potri.013G113700' => 'ptr', 'Potri.018G107800' => 'ptr', 'Potri.019G084100' => 'ptr', 'Pp3c14_23720' => 'ppa', 'Pp3c16_6340' => 'ppa', 'Pp3c23_13420' => 'ppa', 'Pp3c24_2740' => 'ppa', 'Pp3c25_860' => 'ppa', 'Pp3c8_21750' => 'ppa', 'Prupe.1G273000' => 'ppe', 'Prupe.1G273700' => 'ppe', 'Prupe.1G274100' => 'ppe', 'Prupe.2G023300' => 'ppe', 'Prupe.4G048000' => 'ppe', 'Prupe.4G080400' => 'ppe', 'Prupe.4G181200' => 'ppe', 'Prupe.8G056900' => 'ppe', 'Prupe.8G168700' => 'ppe', 'Psat1g189080' => 'psa', 'Psat1g204760' => 'psa', 'Psat4g175560' => 'psa', 'Psat4g177720' => 'psa', 'Psat5g244240' => 'psa', 'Psat6g010720' => 'psa', 'Psat6g187200' => 'psa', 'Psat7g072040' => 'psa', 'PSO017G3501' => 'pso', 'PSO063G2148' => 'pso', 'PSO063G5608' => 'pso', 'PSO210G6392' => 'pso', 'PSO541G2319' => 'pso', 'PSO541G2836' => 'pso', 'PSO541G4012' => 'pso', 'PSO541G6253' => 'pso', 'PSO675G0580' => 'pso', 'PSO675G0856' => 'pso', 'PSO675G5635' => 'pso', 'PSO675G9157' => 'pso', 'PSO832G1660' => 'pso', 'PSO832G1969' => 'pso', 'QL02p007186' => 'qlo', 'QL02p033904' => 'qlo', 'QL03p064391' => 'qlo', 'QL05p040593' => 'qlo', 'QL05p058242' => 'qlo', 'QL08p021825' => 'qlo', 'QL11p004981' => 'qlo', 'RcHm_v2.0_Chr1g0318301' => 'rch', 'RcHm_v2.0_Chr4g0418501' => 'rch', 'RcHm_v2.0_Chr4g0439971' => 'rch', 'RcHm_v2.0_Chr5g0008541' => 'rch', 'RcHm_v2.0_Chr5g0014101' => 'rch', 'RcHm_v2.0_Chr5g0014131' => 'rch', 'RcHm_v2.0_Chr5g0033621' => 'rch', 'RcHm_v2.0_Chr6g0272041' => 'rch', 'RcHm_v2.0_Chr6g0278831' => 'rch', 'Rhsim02G0130400' => 'rsi', 'Rhsim02G0171100' => 'rsi', 'Rhsim05G0053000' => 'rsi', 'Rhsim05G0053100' => 'rsi', 'Rhsim06G0096500' => 'rsi', 'Rhsim06G0096600' => 'rsi', 'Rhsim06G0199100' => 'rsi', 'Rhsim12G0062300' => 'rsi', 'Rhsim12G0062800' => 'rsi', 'Sabra02G0118600' => 'sbr', 'Sabra04G0027300' => 'sbr', 'Sabra04G0119500' => 'sbr', 'Sabra08G0112500' => 'sbr', 'Sabra11G0036800' => 'sbr', 'Sabra11G0103800' => 'sbr', 'Sabra13G0096300' => 'sbr', 'Sabra16G0262300' => 'sbr', 'Sabra18G0091700' => 'sbr', 'Sabra19G0095400' => 'sbr', 'SalBow6G3080' => 'sbo', 'SalBow7G1157' => 'sbo', 'SalBow7G2123' => 'sbo', 'SalBow7G2285' => 'sbo', 'SalBow7G3537' => 'sbo', 'SalBow8G2947' => 'sbo', 'SalBow8G4463' => 'sbo', 'SalBow8G5466' => 'sbo', 'Sc01g0001750' => 'sci', 'Sc02g0006640' => 'sci', 'Sc02g0006670' => 'sci', 'Sc04g0008220' => 'sci', 'Sc05g0006190' => 'sci', 'Sc08g0002760' => 'sci', 'Sc17g0006170' => 'sci', 'Sc22g0002050' => 'sci', 'Sc23g0001190' => 'sci', 'Sc24g0000980' => 'sci', 'Sed0006245' => 'sed', 'Sed0007543' => 'sed', 'Sed0009411' => 'sed', 'Sed0010765' => 'sed', 'Sed0012944' => 'sed', 'Sed0014682' => 'sed', 'Sed0016174' => 'sed', 'Sed0016796' => 'sed', 'Sed0020317' => 'sed', 'Sed0021467' => 'sed', 'SEGI_01316' => 'sgi', 'SEGI_03374' => 'sgi', 'SEGI_16265' => 'sgi', 'SEGI_18569' => 'sgi', 'SEGI_20351' => 'sgi', 'SEGI_26395' => 'sgi', 'SEGI_29469' => 'sgi', 'SEGI_34771' => 'sgi', 'SEGI_36769' => 'sgi', 'SEGI_37139' => 'sgi', 'SGA_v2.0_scaffold100G29687' => 'sas', 'SGA_v2.0_scaffold118G32472' => 'sas', 'SGA_v2.0_scaffold14G07051' => 'sas', 'SGA_v2.0_scaffold183G39845' => 'sas', 'SGA_v2.0_scaffold1G00174' => 'sas', 'SGA_v2.0_scaffold22G09714' => 'sas', 'SGA_v2.0_scaffold333G48992' => 'sas', 'SGA_v2.0_scaffold46G17491' => 'sas', 'SGA_v2.0_scaffold49G18294' => 'sas', 'SGA_v2.0_scaffold63G21658' => 'sas', 'SHI01741' => 'shi', 'SHI05771' => 'shi', 'SHI18077' => 'shi', 'SHI20525' => 'shi', 'SHI20527' => 'shi', 'SHI20528' => 'shi', 'SMO172G0185' => 'smo', 'SMO198G0020' => 'smo', 'SMO351G0006' => 'smo', 'SMO356G0118' => 'smo', 'SMO358G0296' => 'smo', 'SMO367G0079' => 'smo', 'SMO367G1277' => 'smo', 'Solyc01g014220.3' => 'sly', 'Solyc01g111770.2' => 'sly', 'Solyc02g078180.3' => 'sly', 'Solyc03g006430.3' => 'sly', 'Solyc03g006456.1' => 'sly', 'Solyc03g079860.2' => 'sly', 'Solyc04g079770.3' => 'sly', 'Solyc05g007430.4' => 'sly', 'Solyc07g063150.3' => 'sly', 'Solyc08g016620.3' => 'sly', 'Solyc09g057590.3' => 'sly', 'Solyc09g057600.1' => 'sly', 'Solyc10g009050.3' => 'sly', 'Solyc11g017420.2' => 'sly', 'Sopen01g053810' => 'spe', 'Sopen02g023040' => 'spe', 'Sopen03g002440' => 'spe', 'Sopen04g033350' => 'spe', 'Sopen05g003310' => 'spe', 'Sopen07g004050' => 'spe', 'Sopen07g031340' => 'spe', 'Sopen08g006990' => 'spe', 'Sopen10g004830' => 'spe', 'Sopen11g009370' => 'spe', 'Sp1g24450' => 'spa', 'Sp1g29670' => 'spa', 'Sp1g39600' => 'spa', 'Sp2g11080' => 'spa', 'Sp2g13970' => 'spa', 'Sp4g16130' => 'spa', 'Sp6g13080' => 'spa', 'Sp7g37270' => 'spa', 'TAR371G0065' => 'tar', 'TAR376G0340' => 'tar', 'TAR376G0435' => 'tar', 'TAR381G0002' => 'tar', 'TAR381G1236' => 'tar', 'TAR624G0055' => 'tar', 'TAR624G0324' => 'tar', 'TAR624G0696' => 'tar', 'TAR624G0906' => 'tar', 'TAR625G0107' => 'tar', 'TAR626G0015' => 'tar', 'TAR626G1356' => 'tar', 'TAR627G0888' => 'tar', 'TAR628G0399' => 'tar', 'TAR628G1327' => 'tar', 'TAR629G2831' => 'tar', 'TAR629G2874' => 'tar', 'TAR633G1432' => 'tar', 'TAR633G2771' => 'tar', 'THA.LOC104803394' => 'tha', 'THA.LOC104805153' => 'tha', 'THA.LOC104806784' => 'tha', 'THA.LOC104810473' => 'tha', 'THA.LOC104813100' => 'tha', 'THA.LOC104814215' => 'tha', 'THA.LOC104815554' => 'tha', 'THA.LOC104820544' => 'tha', 'THA.LOC104824754' => 'tha', 'THA.LOC104827717' => 'tha', 'Thecc.02G031400' => 'tca', 'Thecc.02G055900' => 'tca', 'Thecc.02G350800' => 'tca', 'Thecc.06G150900' => 'tca', 'Thecc.06G186600' => 'tca', 'Thecc.07G089600' => 'tca', 'Thecc.08G020400' => 'tca', 'Thecc.08G182100' => 'tca', 'Thhalv10000873m.g' => 'esa', 'Thhalv10004185m.g' => 'esa', 'Thhalv10006981m.g' => 'esa', 'Thhalv10007204m.g' => 'esa', 'Thhalv10011374m.g' => 'esa', 'Thhalv10013482m.g' => 'esa', 'Thhalv10017801m.g' => 'esa', 'Thhalv10024983m.g' => 'esa', 'TPR.G12072' => 'tpr', 'TPR.G15769' => 'tpr', 'TPR.G16504' => 'tpr', 'TPR.G16506' => 'tpr', 'TPR.G24345' => 'tpr', 'TPR.G26666' => 'tpr', 'TPR.G27320' => 'tpr', 'TPR.G31819' => 'tpr', 'TPR.G38879' => 'tpr', 'TPR.G39015' => 'tpr', 'TPR.G8819' => 'tpr', 'TWI09G0924' => 'twi', 'TWI12G0811' => 'twi', 'TWI12G1294' => 'twi', 'TWI31G0150' => 'twi', 'TWI36G1262' => 'twi', 'TWI38G1287' => 'twi', 'TWI38G1633' => 'twi', 'TWI38G1982' => 'twi', 'TWI39G0116' => 'twi', 'TWI60G1011' => 'twi', 'TWI63G0171' => 'twi', 'TWI73G0839' => 'twi', 'TWI79G1511' => 'twi', 'unitig_0.g915' => 'ugi', 'unitig_0.g916' => 'ugi', 'unitig_21.g20219' => 'ugi', 'unitig_21.g20416' => 'ugi', 'unitig_578.g16132' => 'ugi', 'unitig_578.g16718' => 'ugi', 'unitig_62.g23481' => 'ugi', 'unitig_744.g24535' => 'ugi', 'unitig_749.g13525' => 'ugi', 'vmacro01248' => 'vma', 'vmacro02290' => 'vma', 'vmacro10946' => 'vma', 'vmacro11865' => 'vma', 'vmacro12493' => 'vma', 'vmacro17322' => 'vma', 'vmacro21599' => 'vma', 'vmacro23041' => 'vma', 'VMungo0251G0004' => 'vmu', 'VMungo0251G2639' => 'vmu', 'VMungo0251G2967' => 'vmu', 'VMungo0540G0864' => 'vmu', 'VMungo0540G1569' => 'vmu', 'VMungo0647G0317' => 'vmu', 'VMungo0720G1373' => 'vmu', 'VMungo0720G1508' => 'vmu', 'VMungo1080G0485' => 'vmu', 'VMungo1215G3177' => 'vmu', 'Zm00001eb112600' => 'zma', 'Zm00001eb120220' => 'zma', 'Zm00001eb153240' => 'zma', 'Zm00001eb168880' => 'zma', 'Zm00001eb213920' => 'zma', 'Zm00001eb228280' => 'zma', 'Zm00001eb254580' => 'zma', 'Zm00001eb272180' => 'zma', 'Zm00001eb293190' => 'zma', 'Zm00001eb322930' => 'zma', 'Zm00001eb353360' => 'zma', 'Zm00001eb353390' => 'zma', 'Zm00001eb353430' => 'zma', 'Zm00001eb353440' => 'zma', 'Zm00001eb353780' => 'zma' ) $gf_id = 'HOM05D000499' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000499' ) $data_identifier = 'HOM05D000499' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 29, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 12, 'amhyb' => (int) 8, 'aly' => (int) 12, 'aox' => (int) 9, 'arhy' => (int) 26, 'ath' => (int) 8, 'atr' => (int) 7, 'acertr' => (int) 10, 'cqu' => (int) 15, 'bca' => (int) 29, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 11, 'cansat' => (int) 8, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 9, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 8, 'cpa' => (int) 10, 'csa' => (int) 7, 'camsi' => (int) 20, 'dca' => (int) 8, 'din' => (int) 12, 'dzi' => (int) 14, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 6, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 38, 'gra' => (int) 16, 'vvi' => (int) 8, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 5, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 11, 'lja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 11, 'mpo' => (int) 3, 'mbi' => (int) 14, 'mdo' => (int) 14, 'mtr' => (int) 8, 'cme' => (int) 9, 'egut' => (int) 9, 'ama' => (int) 11, 'nta' => (int) 17, 'nnu' => (int) 11, 'oeu' => (int) 18, 'osa' => (int) 8, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 6, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 9, 'rsi' => (int) 9, 'sbr' => (int) 10, 'sbo' => (int) 8, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 10, 'sas' => (int) 10, 'shi' => (int) 6, 'smo' => (int) 7, 'sly' => (int) 14, 'spe' => (int) 10, 'spa' => (int) 8, 'tar' => (int) 19, 'tha' => (int) 10, 'tca' => (int) 8, 'esa' => (int) 8, 'tpr' => (int) 11, 'twi' => (int) 13, 'ugi' => (int) 9, 'vma' => (int) 8, 'vmu' => (int) 10, 'zma' => (int) 15 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb353780' $species_info = array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ) $local_species = 'ccl' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000499', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1066', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p29780' => 'bna', 'A02p33180' => 'bna', 'A03p16470' => 'bna', 'A03p66010' => 'bna', 'A04p25970' => 'bna', 'A06p01270' => 'bna', 'A06p46080' => 'bna', 'A07p11400' => 'bna', 'A08p01840' => 'bna', 'A08p08230' => 'bna', 'A08p25740' => 'bna', 'A09p32070' => 'bna', 'A09p37830' => 'bna', 'A09p42840' => 'bna', 'A09p42850' => 'bna', 'Aa31LG10G2060' => 'aar', 'Aa31LG2G7410' => 'aar', 'Aa31LG6G10200' => 'aar', 'Aa31LG6G16680' => 'aar', 'Aa31LG6G8470' => 'aar', 'Aa31LG9G12730' => 'aar', 'Aa31LG9G13680' => 'aar', 'Aa31LG9G14920' => 'aar', 'Aa31LG9G6650' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4977' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5467' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3254' => 'aag', 'Actinidia02578' => 'ach', 'Actinidia07693' => 'ach', 'Actinidia08413' => 'ach', 'Actinidia08414' => 'ach', 'Actinidia15289' => 'ach', 'Actinidia19871' => 'ach', 'Actinidia21475' => 'ach', 'Actinidia22576' => 'ach', 'Actinidia28327' => 'ach', 'Actinidia32491' => 'ach', 'Actinidia39463' => 'ach', 'Actinidia39571' => 'ach', 'Ah.01g013750' => 'amhyb', 'Ah.01g023210' => 'amhyb', 'Ah.04g164850' => 'amhyb', 'Ah.05g178060' => 'amhyb', 'Ah.07g204270' => 'amhyb', 'Ah.07g208480' => 'amhyb', 'Ah.09g237410' => 'amhyb', 'Ah.14g089460' => 'amhyb', 'AL1G41790' => 'aly', 'AL1G49050' => 'aly', 'AL1G53810' => 'aly', 'AL1G61400' => 'aly', 'AL4G18580' => 'aly', 'AL5G12510' => 'aly', 'AL5G12540' => 'aly', 'AL6G43230' => 'aly', 'AL7G10370' => 'aly', 'AL7G19250' => 'aly', 'AL8G12240' => 'aly', 'AL8G18540' => 'aly', 'Aqoxy1G02409' => 'aox', 'Aqoxy2G03993' => 'aox', 'Aqoxy3G03357' => 'aox', 'Aqoxy4G00785' => 'aox', 'Aqoxy5G02598' => 'aox', 'Aqoxy6G00132' => 'aox', 'Aqoxy7G01776' => 'aox', 'Aqoxy7G02316' => 'aox', 'Aqoxy7G03973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.12AFKW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B8730' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27IQR1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3F75VG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3RE0GA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41TCQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.527VTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FIR39' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5W8UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DA38EV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ63HS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H1I32C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HC27T5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4M8AP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7N3CZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9UVDZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LS1NQA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT1D4B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SKC4TM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCFV76' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF9Q1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQWD9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1ZM88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WE07RT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YCK7VH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJE6Q6' => 'arhy', 'AT1G28240' => 'ath', 'AT1G34550' => 'ath', 'AT1G53040' => 'ath', 'AT2G02910' => 'ath', 'AT4G09630' => 'ath', 'AT4G38500' => 'ath', 'AT5G42660' => 'ath', 'AT5G46220' => 'ath', 'ATR0152G026' => 'atr', 'ATR0564G343' => 'atr', 'ATR0706G151' => 'atr', 'ATR0733G207' => 'atr', 'ATR0751G234' => 'atr', 'ATR0807G048' => 'atr', 'ATR1091G084' => 'atr', 'Atru.chr10.1229' => 'acertr', 'Atru.chr10.1230' => 'acertr', 'Atru.chr10.1874' => 'acertr', 'Atru.chr11.1808' => 'acertr', 'Atru.chr13.1795' => 'acertr', 'Atru.chr13.570' => 'acertr', 'Atru.chr2.2608' => 'acertr', 'Atru.chr2.2609' => 'acertr', 'Atru.chr5.3428' => 'acertr', 'Atru.chr8.1171' => 'acertr', 'AUR62004651' => 'cqu', 'AUR62008675' => 'cqu', 'AUR62010014' => 'cqu', 'AUR62013004' => 'cqu', 'AUR62014825' => 'cqu', 'AUR62015015' => 'cqu', 'AUR62015151' => 'cqu', 'AUR62017020' => 'cqu', 'AUR62019422' => 'cqu', 'AUR62023570' => 'cqu', 'AUR62025571' => 'cqu', 'AUR62029098' => 'cqu', 'AUR62033863' => 'cqu', 'AUR62034296' => 'cqu', 'AUR62040075' => 'cqu', 'BcaB02g07334' => 'bca', 'BcaB02g10575' => 'bca', 'BcaB03g12119' => 'bca', 'BcaB03g12120' => 'bca', 'BcaB03g13945' => 'bca', 'BcaB04g17123' => 'bca', 'BcaB04g17867' => 'bca', 'BcaB04g19839' => 'bca', 'BcaB07g30317' => 'bca', 'BcaB07g32432' => 'bca', 'BcaB07g33362' => 'bca', 'BcaB08g36611' => 'bca', 'BcaC01g00028' => 'bca', 'BcaC01g01356' => 'bca', 'BcaC01g02034' => 'bca', 'BcaC01g06051' => 'bca', 'BcaC03g16839' => 'bca', 'BcaC03g17176' => 'bca', 'BcaC05g26829' => 'bca', 'BcaC06g31490' => 'bca', 'BcaC06g35344' => 'bca', 'BcaC06g36570' => 'bca', 'BcaC07g37537' => 'bca', 'BcaC08g43491' => 'bca', 'BcaC08g43773' => 'bca', 'BcaNung00234' => 'bca', 'BcaNung01982' => 'bca', 'BcaNung03707' => 'bca', 'BcaNung06454' => 'bca', 'BolC2t10762H' => 'bol', 'BolC2t11191H' => 'bol', 'BolC3t14322H' => 'bol', 'BolC3t19747H' => 'bol', 'BolC3t21425H' => 'bol', 'BolC4t27800H' => 'bol', 'BolC5t31423H' => 'bol', 'BolC6t35951H' => 'bol', 'BolC6t36282H' => 'bol', 'BolC7t40678H' => 'bol', 'BolC7t40679H' => 'bol', 'BolC7t42222H' => 'bol', 'BolC7t43492H' => 'bol', 'BolC7t46785H' => 'bol', 'BolC8t47853H' => 'bol', 'BolC9t56805H' => 'bol', 'BraA02t08000Z' => 'bra', 'BraA02t08341Z' => 'bra', 'BraA03t10936Z' => 'bra', 'BraA03t15657Z' => 'bra', 'BraA04t18100Z' => 'bra', 'BraA05t20523Z' => 'bra', 'BraA06t23353Z' => 'bra', 'BraA06t27473Z' => 'bra', 'BraA06t27769Z' => 'bra', 'BraA07t28928Z' => 'bra', 'BraA08t32236Z' => 'bra', 'BraA08t32841Z' => 'bra', 'BraA08t34524Z' => 'bra', 'BraA09t38742Z' => 'bra', 'BraA09t39295Z' => 'bra', 'C02p47180' => 'bna', 'C02p50990' => 'bna', 'C03p19360' => 'bna', 'C03p74950' => 'bna', 'C03p91000' => 'bna', 'C04p63260' => 'bna', 'C05p27050' => 'bna', 'C06p08750' => 'bna', 'C06p11490' => 'bna', 'C07p02820' => 'bna', 'C07p17180' => 'bna', 'C07p29440' => 'bna', 'C07p63730' => 'bna', 'C09p39260' => 'bna', 'CAN.G1164.34' => 'can', 'CAN.G1164.39' => 'can', 'CAN.G1530.3' => 'can', 'CAN.G162.61' => 'can', 'CAN.G176.6' => 'can', 'CAN.G289.49' => 'can', 'CAN.G370.21' => 'can', 'CAN.G370.22' => 'can', 'CAN.G371.117' => 'can', 'CAN.G58.37' => 'can', 'CAN.G588.98' => 'can', 'CANSAT21G2266' => 'cansat', 'CANSAT25G2799' => 'cansat', 'CANSAT35G0862' => 'cansat', 'CANSAT35G1704' => 'cansat', 'CANSAT35G1760' => 'cansat', 'CANSAT56G3971' => 'cansat', 'CANSAT56G4116' => 'cansat', 'CANSAT80G1259' => 'cansat', 'CARHR027730' => 'chi', 'CARHR033880' => 'chi', 'CARHR043270' => 'chi', 'CARHR145330' => 'chi', 'CARHR145340' => 'chi', 'CARHR175570' => 'chi', 'CARHR181570' => 'chi', 'CARHR258470' => 'chi', 'CARHR260490' => 'chi', 'CARHR294220' => 'chi', 'Carub.0001s2668' => 'cru', 'Carub.0001s3257' => 'cru', 'Carub.0001s4220' => 'cru', 'Carub.0005s0179' => 'cru', 'Carub.0006s2807' => 'cru', 'Carub.0007s0039' => 'cru', 'Carub.0008s0169' => 'cru', 'Carub.0008s0636' => 'cru', 'Ca_00338_v3' => 'car', 'Ca_00542_v3' => 'car', 'Ca_01844_v3' => 'car', 'Ca_10611_v3' => 'car', 'Ca_13326_v3' => 'car', 'Ca_17944_v3' => 'car', 'Ca_18546_v3' => 'car', 'Ca_24219_v3' => 'car', 'Ca_29972_v3' => 'car', 'CBR_g3681' => 'cbr', 'CBR_g40021' => 'cbr', 'Cc01_g08140' => 'ccan', 'Cc02_g13410' => 'ccan', 'Cc02_g37480' => 'ccan', 'Cc05_g12030' => 'ccan', 'Cc09_g03370' => 'ccan', 'Cc09_g10300' => 'ccan', 'Cc10_g03530' => 'ccan', 'Cc10_g11380' => 'ccan', 'CDE01G0176' => 'cde', 'CDE02G0675' => 'cde', 'CDE02G0942' => 'cde', 'CDE02G1153' => 'cde', 'CDE02G4177' => 'cde', 'CDE04G2117' => 'cde', 'CDE04G2736' => 'cde', 'CDE08G1161' => 'cde', 'CDE09G1238' => 'cde', 'Cfa000467' => 'cfa', 'Cfa000947' => 'cfa', 'Cfa004969' => 'cfa', 'Cfa005284' => 'cfa', 'Cfa008993' => 'cfa', 'Cfa018187' => 'cfa', 'Cfa018454' => 'cfa', 'Cfa020585' => 'cfa', 'Ciclev10000424m.g' => 'ccl', 'Ciclev10003605m.g' => 'ccl', 'Ciclev10007828m.g' => 'ccl', 'Ciclev10014620m.g' => 'ccl', 'Ciclev10015169m.g' => 'ccl', 'Ciclev10018291m.g' => 'ccl', 'Ciclev10028256m.g' => 'ccl', 'Ciclev10033822m.g' => 'ccl', 'CiPaw.05G060300' => 'cil', 'CiPaw.05G085000' => 'cil', 'CiPaw.06G083700' => 'cil', 'CiPaw.06G120300' => 'cil', 'CiPaw.09G060500' => 'cil', 'CiPaw.09G123800' => 'cil', 'CiPaw.11G169700' => 'cil', 'CiPaw.12G118300' => 'cil', 'CiPaw.15G071000' => 'cil', 'CiPaw.15G081900' => 'cil', 'ClCG01G024610' => 'cla', 'ClCG03G006070' => 'cla', 'ClCG05G019250' => 'cla', 'ClCG09G009500' => 'cla', 'ClCG11G008200' => 'cla', 'ClCG11G018080' => 'cla', 'COL.COLO4_17373' => 'col', 'COL.COLO4_22994' => 'col', 'COL.COLO4_26389' => 'col', 'COL.COLO4_27170' => 'col', 'COL.COLO4_31074' => 'col', 'COL.COLO4_31465' => 'col', 'COL.COLO4_36438' => 'col', 'COL.COLO4_36439' => 'col', 'Cpa.g.c38781' => 'cpa', 'Cpa.g.sc128.12' => 'cpa', 'Cpa.g.sc166.7' => 'cpa', 'Cpa.g.sc166.8' => 'cpa', 'Cpa.g.sc20.111' => 'cpa', 'Cpa.g.sc27.31' => 'cpa', 'Cpa.g.sc64.36' => 'cpa', 'Cpa.g.sc64.37' => 'cpa', 'Cpa.g.sc66.49' => 'cpa', 'Cpa.g.sc80.64' => 'cpa', 'CsaV3_1G012320' => 'csa', 'CsaV3_2G008480' => 'csa', 'CsaV3_2G033450' => 'csa', 'CsaV3_3G044830' => 'csa', 'CsaV3_4G033710' => 'csa', 'CsaV3_6G051730' => 'csa', 'CsaV3_7G025350' => 'csa', 'CSS0001067' => 'camsi', 'CSS0005996' => 'camsi', 'CSS0006590' => 'camsi', 'CSS0009673' => 'camsi', 'CSS0010201' => 'camsi', 'CSS0010549' => 'camsi', 'CSS0011364' => 'camsi', 'CSS0014473' => 'camsi', 'CSS0014961' => 'camsi', 'CSS0020191' => 'camsi', 'CSS0021165' => 'camsi', 'CSS0022306' => 'camsi', 'CSS0030591' => 'camsi', 'CSS0030696' => 'camsi', 'CSS0032653' => 'camsi', 'CSS0037487' => 'camsi', 'CSS0041102' => 'camsi', 'CSS0041261' => 'camsi', 'CSS0046246' => 'camsi', 'CSS0049256' => 'camsi', 'DCAR_004075' => 'dca', 'DCAR_011538' => 'dca', 'DCAR_019553' => 'dca', 'DCAR_020952' => 'dca', 'DCAR_021739' => 'dca', 'DCAR_027407' => 'dca', 'DCAR_027913' => 'dca', 'DCAR_028066' => 'dca', 'Dinv05899' => 'din', 'Dinv07563' => 'din', 'Dinv08010' => 'din', 'Dinv14125' => 'din', 'Dinv20172' => 'din', 'Dinv30743' => 'din', 'Dinv31229' => 'din', 'Dinv34162' => 'din', 'Dinv36028' => 'din', 'Dinv39368' => 'din', 'Dinv40565' => 'din', 'Dinv41706' => 'din', 'Duzib052G0089' => 'dzi', 'Duzib116G0641' => 'dzi', 'Duzib132G0069' => 'dzi', 'Duzib132G1219' => 'dzi', 'Duzib147G0278' => 'dzi', 'Duzib160G0480' => 'dzi', 'Duzib170G0661' => 'dzi', 'Duzib177G0591' => 'dzi', 'Duzib187G1353' => 'dzi', 'Duzib192G0858' => 'dzi', 'Duzib192G0883' => 'dzi', 'Duzib213G0506' => 'dzi', 'Duzib235G0289' => 'dzi', 'Duzib251G0422' => 'dzi', 'ECA232G3898' => 'eca', 'ECA233G5950' => 'eca', 'ECA234G1699' => 'eca', 'ECA234G2421' => 'eca', 'ECA236G0426' => 'eca', 'ECA236G4331' => 'eca', 'ECA248G2573' => 'eca', 'EL10Ac1g00077' => 'bvu', 'EL10Ac1g01746' => 'bvu', 'EL10Ac2g03464' => 'bvu', 'EL10Ac4g08176' => 'bvu', 'EL10Ac7g17521' => 'bvu', 'EL10Ac8g20386' => 'bvu', 'EL10Ac9g21343' => 'bvu', 'EL10Ac9g22688' => 'bvu', 'Eucgr.B03434' => 'egr', 'Eucgr.D00618' => 'egr', 'Eucgr.E02395' => 'egr', 'Eucgr.F01129' => 'egr', 'Eucgr.F02622' => 'egr', 'Eucgr.F04207' => 'egr', 'FAN01G0570' => 'fan', 'FAN03G3351' => 'fan', 'FAN06G3702' => 'fan', 'FAN07G2149' => 'fan', 'FAN10G3758' => 'fan', 'FAN11G1170' => 'fan', 'FAN11G2050' => 'fan', 'FAN11G2724' => 'fan', 'FAN12G1700' => 'fan', 'FAN12G2028' => 'fan', 'FAN15G1160' => 'fan', 'FAN15G3063' => 'fan', 'FAN16G2540' => 'fan', 'FAN16G3077' => 'fan', 'FAN16G3624' => 'fan', 'FAN17G0221' => 'fan', 'FAN20G2492' => 'fan', 'FAN20G2905' => 'fan', 'FAN21G0548' => 'fan', 'FAN21G1300' => 'fan', 'FAN22G0077' => 'fan', 'FAN22G1315' => 'fan', 'FAN24G1280' => 'fan', 'FAN24G1445' => 'fan', 'FAN24G3527' => 'fan', 'FAN25G0464' => 'fan', 'FAN25G2885' => 'fan', 'FAN25G3270' => 'fan', 'FAN27G1101' => 'fan', 'FAN27G2846' => 'fan', 'FAN27G3524' => 'fan', 'FvH4_2g11770' => 'fve', 'FvH4_2g15630' => 'fve', 'FvH4_3g05570' => 'fve', 'FvH4_3g09110' => 'fve', 'FvH4_3g19940' => 'fve', 'FvH4_4g04821' => 'fve', 'FvH4_4g31480' => 'fve', 'FvH4_7g01740' => 'fve', 'Glyma.05G130400' => 'gma', 'Glyma.05G156400' => 'gma', 'Glyma.07G197000' => 'gma', 'Glyma.08G085151' => 'gma', 'Glyma.08G114500' => 'gma', 'Glyma.08G300400' => 'gma', 'Glyma.10G215800' => 'gma', 'Glyma.12G224400' => 'gma', 'Glyma.13G179300' => 'gma', 'Glyma.13G218151' => 'gma', 'Glyma.13G238800' => 'gma', 'Glyma.13G276900' => 'gma', 'Glyma.14G078200' => 'gma', 'Glyma.15G074500' => 'gma', 'Glyma.15G094100' => 'gma', 'Glyma.17G247200' => 'gma', 'Glyma.18G120100' => 'gma', 'Glyma.20G176000' => 'gma', 'Gohir.A01G063600' => 'ghi', 'Gohir.A01G170301' => 'ghi', 'Gohir.A02G060500' => 'ghi', 'Gohir.A05G133850' => 'ghi', 'Gohir.A05G161400' => 'ghi', 'Gohir.A06G012900' => 'ghi', 'Gohir.A06G035901' => 'ghi', 'Gohir.A06G127100' => 'ghi', 'Gohir.A06G210500' => 'ghi', 'Gohir.A08G008650' => 'ghi', 'Gohir.A09G072700' => 'ghi', 'Gohir.A09G088301' => 'ghi', 'Gohir.A10G040600' => 'ghi', 'Gohir.A12G036300' => 'ghi', 'Gohir.A12G143350' => 'ghi', 'Gohir.A12G165500' => 'ghi', 'Gohir.A13G145700' => 'ghi', 'Gohir.D01G050000' => 'ghi', 'Gohir.D01G051366' => 'ghi', 'Gohir.D01G161350' => 'ghi', 'Gohir.D02G065900' => 'ghi', 'Gohir.D05G164200' => 'ghi', 'Gohir.D05G355500' => 'ghi', 'Gohir.D06G010400' => 'ghi', 'Gohir.D06G111250' => 'ghi', 'Gohir.D06G132000' => 'ghi', 'Gohir.D06G210500' => 'ghi', 'Gohir.D07G165675' => 'ghi', 'Gohir.D08G062240' => 'ghi', 'Gohir.D08G086101' => 'ghi', 'Gohir.D08G138060' => 'ghi', 'Gohir.D09G072300' => 'ghi', 'Gohir.D10G041400' => 'ghi', 'Gohir.D11G191020' => 'ghi', 'Gohir.D11G212066' => 'ghi', 'Gohir.D12G036300' => 'ghi', 'Gohir.D12G168600' => 'ghi', 'Gohir.D13G150600' => 'ghi', 'Gorai.001G057300' => 'gra', 'Gorai.002G069900' => 'gra', 'Gorai.002G200000' => 'gra', 'Gorai.003G067600' => 'gra', 'Gorai.005G074800' => 'gra', 'Gorai.006G087300' => 'gra', 'Gorai.008G037500' => 'gra', 'Gorai.008G181400' => 'gra', 'Gorai.009G169400' => 'gra', 'Gorai.009G387900' => 'gra', 'Gorai.010G013300' => 'gra', 'Gorai.010G153800' => 'gra', 'Gorai.010G255800' => 'gra', 'Gorai.011G043700' => 'gra', 'Gorai.011G198900' => 'gra', 'Gorai.013G168400' => 'gra', 'GSVIVG01005212001' => 'vvi', 'GSVIVG01006163001' => 'vvi', 'GSVIVG01009625001' => 'vvi', 'GSVIVG01014338001' => 'vvi', 'GSVIVG01020005001' => 'vvi', 'GSVIVG01021450001' => 'vvi', 'GSVIVG01023975001' => 'vvi', 'GSVIVG01034490001' => 'vvi', 'HanXRQChr04g0112071' => 'han', 'HanXRQChr05g0131151' => 'han', 'HanXRQChr09g0262371' => 'han', 'HanXRQChr09g0268401' => 'han', 'HanXRQChr10g0279241' => 'han', 'HanXRQChr10g0297961' => 'han', 'HanXRQChr11g0326231' => 'han', 'HanXRQChr11g0328471' => 'han', 'HanXRQChr16g0507941' => 'han', 'HanXRQChr17g0560211' => 'han', 'Haze_02108' => 'cav', 'Haze_02428' => 'cav', 'Haze_05593' => 'cav', 'Haze_06448' => 'cav', 'Haze_09427' => 'cav', 'Haze_12022' => 'cav', 'Haze_17612' => 'cav', 'Haze_17928' => 'cav', 'Hma1.2p1_0032F.1_g019250' => 'hma', 'Hma1.2p1_0163F.1_g072690' => 'hma', 'Hma1.2p1_0265F.1_g106710' => 'hma', 'Hma1.2p1_0286F.1_g113970' => 'hma', 'Hma1.2p1_0363F.1_g136640' => 'hma', 'Hma1.2p1_0584F.1_g183470' => 'hma', 'Hma1.2p1_0885F.1_g232570' => 'hma', 'HPP92_006022' => 'vpl', 'HPP92_007320' => 'vpl', 'HPP92_011521' => 'vpl', 'HPP92_019387' => 'vpl', 'HPP92_024038' => 'vpl', 'Hund05891' => 'sun', 'Hund06450' => 'sun', 'Hund12053' => 'sun', 'Hund16800' => 'sun', 'Hund21222' => 'sun', 'Hund22896' => 'sun', 'Hund23746' => 'sun', 'Hund27083' => 'sun', 'Lalb_Chr02g0141831' => 'lal', 'Lalb_Chr02g0141841' => 'lal', 'Lalb_Chr05g0220411' => 'lal', 'Lalb_Chr06g0162081' => 'lal', 'Lalb_Chr09g0327651' => 'lal', 'Lalb_Chr13g0295051' => 'lal', 'Lalb_Chr15g0086801' => 'lal', 'Lalb_Chr16g0383781' => 'lal', 'Lalb_Chr16g0383791' => 'lal', 'Lalb_Chr18g0055441' => 'lal', 'Lalb_Chr18g0059611' => 'lal', 'Lalb_Chr20g0109661' => 'lal', 'Lalb_Chr20g0109831' => 'lal', 'Lalb_Chr20g0121871' => 'lal', 'Lalb_Chr22g0355361' => 'lal', 'Lalb_Chr25g0286371' => 'lal', 'Lj1A1187G43' => 'lonja', 'Lj1A1205T50' => 'lonja', 'Lj1A800G33' => 'lonja', 'Lj1C1187T7' => 'lonja', 'Lj1C843T11' => 'lonja', 'Lj1g0010940' => 'lja', 'Lj2A288T69' => 'lonja', 'Lj3g0024276' => 'lja', 'Lj4A47T76' => 'lonja', 'Lj4g0005805' => 'lja', 'Lj4g0006097' => 'lja', 'Lj4g0008528' => 'lja', 'Lj4g0024907' => 'lja', 'Lj5g0012472' => 'lja', 'Lj5g0018648' => 'lja', 'Lj6C789G1' => 'lonja', 'Lj6g0004000' => 'lja', 'Lj7A292G67' => 'lonja', 'Lj7A292T64' => 'lonja', 'Lj9A400T58' => 'lonja', 'Lsat_1_v5_gn_1_126181' => 'lsa', 'Lsat_1_v5_gn_4_123041' => 'lsa', 'Lsat_1_v5_gn_4_133620' => 'lsa', 'Lsat_1_v5_gn_4_53221' => 'lsa', 'Lsat_1_v5_gn_4_71961' => 'lsa', 'Lsat_1_v5_gn_7_105241' => 'lsa', 'Lsat_1_v5_gn_7_21361' => 'lsa', 'Lsat_1_v5_gn_7_28860' => 'lsa', 'Lsat_1_v5_gn_7_31260' => 'lsa', 'Lsat_1_v5_gn_8_52801' => 'lsa', 'Manes.02G191400' => 'mes', 'Manes.03G110100' => 'mes', 'Manes.04G071100' => 'mes', 'Manes.05G100500' => 'mes', 'Manes.05G164700' => 'mes', 'Manes.15G087000' => 'mes', 'Manes.15G121500' => 'mes', 'Manes.16G028300' => 'mes', 'Manes.17G046100' => 'mes', 'Manes.17G069800' => 'mes', 'Manes.18G100500' => 'mes', 'Mapoly0002s0109' => 'mpo', 'Mapoly0024s0007' => 'mpo', 'Mapoly0089s0032' => 'mpo', 'MBI04_g42241_MAGBIO' => 'mbi', 'MBI05_g11988_MAGBIO' => 'mbi', 'MBI05_g35452_MAGBIO' => 'mbi', 'MBI07_g30179_MAGBIO' => 'mbi', 'MBI07_g35859_MAGBIO' => 'mbi', 'MBI07_g35860_MAGBIO' => 'mbi', 'MBI07_g37166_MAGBIO' => 'mbi', 'MBI08_g18172_MAGBIO' => 'mbi', 'MBI09_g08441_MAGBIO' => 'mbi', 'MBI13_g01676_MAGBIO' => 'mbi', 'MBI14_g42955_MAGBIO' => 'mbi', 'MBI16_g13161_MAGBIO' => 'mbi', 'MBI17_g27204_MAGBIO' => 'mbi', 'MBI19_g21595_MAGBIO' => 'mbi', 'MD00G1148400' => 'mdo', 'MD02G1301200' => 'mdo', 'MD03G1227800' => 'mdo', 'MD05G1041100' => 'mdo', 'MD05G1124800' => 'mdo', 'MD05G1284000' => 'mdo', 'MD05G1338800' => 'mdo', 'MD05G1338900' => 'mdo', 'MD07G1022800' => 'mdo', 'MD10G1047500' => 'mdo', 'MD10G1127500' => 'mdo', 'MD10G1262300' => 'mdo', 'MD10G1293800' => 'mdo', 'MD16G1074300' => 'mdo', 'Medtr1g021670' => 'mtr', 'Medtr1g096320' => 'mtr', 'Medtr2g013690' => 'mtr', 'Medtr2g019450' => 'mtr', 'Medtr2g085170' => 'mtr', 'Medtr4g088785' => 'mtr', 'Medtr8g055930' => 'mtr', 'Medtr8g085850' => 'mtr', 'MELO3C002605.2' => 'cme', 'MELO3C003891.2' => 'cme', 'MELO3C004012.2' => 'cme', 'MELO3C007134.2' => 'cme', 'MELO3C008118.2' => 'cme', 'MELO3C016700.2' => 'cme', 'MELO3C024127.2' => 'cme', 'MELO3C033361.2' => 'cme', 'MELO3C033362.2' => 'cme', 'Migut.C00430' => 'egut', 'Migut.C01246' => 'egut', 'Migut.E00101' => 'egut', 'Migut.H01486' => 'egut', 'Migut.H01939' => 'egut', 'Migut.K00360' => 'egut', 'Migut.M00910' => 'egut', 'Migut.M01139' => 'egut', 'Migut.N02677' => 'egut', 'MSTRG.13252' => 'ama', 'MSTRG.14701' => 'ama', 'MSTRG.1521' => 'ama', 'MSTRG.15884' => 'ama', 'MSTRG.16242' => 'ama', 'MSTRG.22285' => 'ama', 'MSTRG.22444' => 'ama', 'MSTRG.2349' => 'ama', 'MSTRG.26308' => 'ama', 'MSTRG.28296' => 'ama', 'MSTRG.9895' => 'ama', 'Nitab4.5_0000110g0060' => 'nta', 'Nitab4.5_0000420g0130' => 'nta', 'Nitab4.5_0000422g0030' => 'nta', 'Nitab4.5_0000560g0180' => 'nta', 'Nitab4.5_0000703g0100' => 'nta', 'Nitab4.5_0000786g0200' => 'nta', 'Nitab4.5_0001336g0020' => 'nta', 'Nitab4.5_0001796g0030' => 'nta', 'Nitab4.5_0003348g0060' => 'nta', 'Nitab4.5_0003698g0040' => 'nta', 'Nitab4.5_0003942g0090' => 'nta', 'Nitab4.5_0004775g0070' => 'nta', 'Nitab4.5_0004864g0030' => 'nta', 'Nitab4.5_0005615g0020' => 'nta', 'Nitab4.5_0009288g0030' => 'nta', 'Nitab4.5_0009341g0010' => 'nta', 'Nitab4.5_0009535g0010' => 'nta', 'Nn1g03995' => 'nnu', 'Nn1g04100' => 'nnu', 'Nn1g06530' => 'nnu', 'Nn3g16404' => 'nnu', 'Nn3g17212' => 'nnu', 'Nn3g20776' => 'nnu', 'Nn3g21923' => 'nnu', 'Nn5g27737' => 'nnu', 'Nn5g29461' => 'nnu', 'Nn7g38355' => 'nnu', 'Nn8g39873' => 'nnu', 'Oeu000548.2' => 'oeu', 'Oeu004672.1' => 'oeu', 'Oeu015605.2' => 'oeu', 'Oeu016092.1' => 'oeu', 'Oeu017879.3' => 'oeu', 'Oeu024910.1' => 'oeu', 'Oeu028965.1' => 'oeu', 'Oeu031269.1' => 'oeu', 'Oeu031270.1' => 'oeu', 'Oeu032535.1' => 'oeu', 'Oeu034151.1' => 'oeu', 'Oeu034152.1' => 'oeu', 'Oeu034588.2' => 'oeu', 'Oeu050846.1' => 'oeu', 'Oeu050849.2' => 'oeu', 'Oeu051063.2' => 'oeu', 'Oeu052368.1' => 'oeu', 'Oeu052370.1' => 'oeu', 'Os01g0210400' => 'osa', 'Os01g0304300' => 'osa', 'Os01g0749100' => 'osa', 'Os02g0745800' => 'osa', 'Os03g0769050' => 'osa', 'Os05g0531500' => 'osa', 'Os06g0724300' => 'osa', 'Os11g0198100' => 'osa', 'Peaxi162Scf00069g01425' => 'pax', 'Peaxi162Scf00280g00811' => 'pax', 'Peaxi162Scf00310g00615' => 'pax', 'Peaxi162Scf00362g00542' => 'pax', 'Peaxi162Scf00461g00310' => 'pax', 'Peaxi162Scf00530g00118' => 'pax', 'Peaxi162Scf00541g00057' => 'pax', 'Peaxi162Scf00661g00017' => 'pax', 'Peaxi162Scf00926g00027' => 'pax', 'Peaxi162Scf01064g00263' => 'pax', 'Peaxi162Scf01211g00135' => 'pax', 'PGR004G2336' => 'pgr', 'PGR042G0327' => 'pgr', 'PGR042G1957' => 'pgr', 'PGR042G2003' => 'pgr', 'PGR042G3929' => 'pgr', 'PGR083G1137' => 'pgr', 'PGR083G1364' => 'pgr', 'PGSC0003DMG400003381' => 'stu', 'PGSC0003DMG400003417' => 'stu', 'PGSC0003DMG400008981' => 'stu', 'PGSC0003DMG400012417' => 'stu', 'PGSC0003DMG400012823' => 'stu', 'PGSC0003DMG400016885' => 'stu', 'PGSC0003DMG400022812' => 'stu', 'PGSC0003DMG400029726' => 'stu', 'PGSC0003DMG401009243' => 'stu', 'PGSC0003DMG401031505' => 'stu', 'PGSC0003DMG402031505' => 'stu', 'Phvul.001G017600' => 'pvu', 'Phvul.002G193500' => 'pvu', 'Phvul.002G228900' => 'pvu', 'Phvul.002G236800' => 'pvu', 'Phvul.003G049500' => 'pvu', 'Phvul.005G072000' => 'pvu', 'Phvul.006G164800' => 'pvu', 'Phvul.006G185100' => 'pvu', 'Phvul.007G090000' => 'pvu', 'Potri.001G399800' => 'ptr', 'Potri.002G149900' => 'ptr', 'Potri.004G044100' => 'ptr', 'Potri.004G177600' => 'ptr', 'Potri.009G138000' => 'ptr', 'Potri.010G094000' => 'ptr', 'Potri.011G053000' => 'ptr', 'Potri.011G119300' => 'ptr', 'Potri.013G113700' => 'ptr', 'Potri.018G107800' => 'ptr', 'Potri.019G084100' => 'ptr', 'Pp3c14_23720' => 'ppa', 'Pp3c16_6340' => 'ppa', 'Pp3c23_13420' => 'ppa', 'Pp3c24_2740' => 'ppa', 'Pp3c25_860' => 'ppa', 'Pp3c8_21750' => 'ppa', 'Prupe.1G273000' => 'ppe', 'Prupe.1G273700' => 'ppe', 'Prupe.1G274100' => 'ppe', 'Prupe.2G023300' => 'ppe', 'Prupe.4G048000' => 'ppe', 'Prupe.4G080400' => 'ppe', 'Prupe.4G181200' => 'ppe', 'Prupe.8G056900' => 'ppe', 'Prupe.8G168700' => 'ppe', 'Psat1g189080' => 'psa', 'Psat1g204760' => 'psa', 'Psat4g175560' => 'psa', 'Psat4g177720' => 'psa', 'Psat5g244240' => 'psa', 'Psat6g010720' => 'psa', 'Psat6g187200' => 'psa', 'Psat7g072040' => 'psa', 'PSO017G3501' => 'pso', 'PSO063G2148' => 'pso', 'PSO063G5608' => 'pso', 'PSO210G6392' => 'pso', 'PSO541G2319' => 'pso', 'PSO541G2836' => 'pso', 'PSO541G4012' => 'pso', 'PSO541G6253' => 'pso', 'PSO675G0580' => 'pso', 'PSO675G0856' => 'pso', 'PSO675G5635' => 'pso', 'PSO675G9157' => 'pso', 'PSO832G1660' => 'pso', 'PSO832G1969' => 'pso', 'QL02p007186' => 'qlo', 'QL02p033904' => 'qlo', 'QL03p064391' => 'qlo', 'QL05p040593' => 'qlo', 'QL05p058242' => 'qlo', 'QL08p021825' => 'qlo', 'QL11p004981' => 'qlo', 'RcHm_v2.0_Chr1g0318301' => 'rch', 'RcHm_v2.0_Chr4g0418501' => 'rch', 'RcHm_v2.0_Chr4g0439971' => 'rch', 'RcHm_v2.0_Chr5g0008541' => 'rch', 'RcHm_v2.0_Chr5g0014101' => 'rch', 'RcHm_v2.0_Chr5g0014131' => 'rch', 'RcHm_v2.0_Chr5g0033621' => 'rch', 'RcHm_v2.0_Chr6g0272041' => 'rch', 'RcHm_v2.0_Chr6g0278831' => 'rch', 'Rhsim02G0130400' => 'rsi', 'Rhsim02G0171100' => 'rsi', 'Rhsim05G0053000' => 'rsi', 'Rhsim05G0053100' => 'rsi', 'Rhsim06G0096500' => 'rsi', 'Rhsim06G0096600' => 'rsi', 'Rhsim06G0199100' => 'rsi', 'Rhsim12G0062300' => 'rsi', 'Rhsim12G0062800' => 'rsi', 'Sabra02G0118600' => 'sbr', 'Sabra04G0027300' => 'sbr', 'Sabra04G0119500' => 'sbr', 'Sabra08G0112500' => 'sbr', 'Sabra11G0036800' => 'sbr', 'Sabra11G0103800' => 'sbr', 'Sabra13G0096300' => 'sbr', 'Sabra16G0262300' => 'sbr', 'Sabra18G0091700' => 'sbr', 'Sabra19G0095400' => 'sbr', 'SalBow6G3080' => 'sbo', 'SalBow7G1157' => 'sbo', 'SalBow7G2123' => 'sbo', 'SalBow7G2285' => 'sbo', 'SalBow7G3537' => 'sbo', 'SalBow8G2947' => 'sbo', 'SalBow8G4463' => 'sbo', 'SalBow8G5466' => 'sbo', 'Sc01g0001750' => 'sci', 'Sc02g0006640' => 'sci', 'Sc02g0006670' => 'sci', 'Sc04g0008220' => 'sci', 'Sc05g0006190' => 'sci', 'Sc08g0002760' => 'sci', 'Sc17g0006170' => 'sci', 'Sc22g0002050' => 'sci', 'Sc23g0001190' => 'sci', 'Sc24g0000980' => 'sci', 'Sed0006245' => 'sed', 'Sed0007543' => 'sed', 'Sed0009411' => 'sed', 'Sed0010765' => 'sed', 'Sed0012944' => 'sed', 'Sed0014682' => 'sed', 'Sed0016174' => 'sed', 'Sed0016796' => 'sed', 'Sed0020317' => 'sed', 'Sed0021467' => 'sed', 'SEGI_01316' => 'sgi', 'SEGI_03374' => 'sgi', 'SEGI_16265' => 'sgi', 'SEGI_18569' => 'sgi', 'SEGI_20351' => 'sgi', 'SEGI_26395' => 'sgi', 'SEGI_29469' => 'sgi', 'SEGI_34771' => 'sgi', 'SEGI_36769' => 'sgi', 'SEGI_37139' => 'sgi', 'SGA_v2.0_scaffold100G29687' => 'sas', 'SGA_v2.0_scaffold118G32472' => 'sas', 'SGA_v2.0_scaffold14G07051' => 'sas', 'SGA_v2.0_scaffold183G39845' => 'sas', 'SGA_v2.0_scaffold1G00174' => 'sas', 'SGA_v2.0_scaffold22G09714' => 'sas', 'SGA_v2.0_scaffold333G48992' => 'sas', 'SGA_v2.0_scaffold46G17491' => 'sas', 'SGA_v2.0_scaffold49G18294' => 'sas', 'SGA_v2.0_scaffold63G21658' => 'sas', 'SHI01741' => 'shi', 'SHI05771' => 'shi', 'SHI18077' => 'shi', 'SHI20525' => 'shi', 'SHI20527' => 'shi', 'SHI20528' => 'shi', 'SMO172G0185' => 'smo', 'SMO198G0020' => 'smo', 'SMO351G0006' => 'smo', 'SMO356G0118' => 'smo', 'SMO358G0296' => 'smo', 'SMO367G0079' => 'smo', 'SMO367G1277' => 'smo', 'Solyc01g014220.3' => 'sly', 'Solyc01g111770.2' => 'sly', 'Solyc02g078180.3' => 'sly', 'Solyc03g006430.3' => 'sly', 'Solyc03g006456.1' => 'sly', 'Solyc03g079860.2' => 'sly', 'Solyc04g079770.3' => 'sly', 'Solyc05g007430.4' => 'sly', 'Solyc07g063150.3' => 'sly', 'Solyc08g016620.3' => 'sly', 'Solyc09g057590.3' => 'sly', 'Solyc09g057600.1' => 'sly', 'Solyc10g009050.3' => 'sly', 'Solyc11g017420.2' => 'sly', 'Sopen01g053810' => 'spe', 'Sopen02g023040' => 'spe', 'Sopen03g002440' => 'spe', 'Sopen04g033350' => 'spe', 'Sopen05g003310' => 'spe', 'Sopen07g004050' => 'spe', 'Sopen07g031340' => 'spe', 'Sopen08g006990' => 'spe', 'Sopen10g004830' => 'spe', 'Sopen11g009370' => 'spe', 'Sp1g24450' => 'spa', 'Sp1g29670' => 'spa', 'Sp1g39600' => 'spa', 'Sp2g11080' => 'spa', 'Sp2g13970' => 'spa', 'Sp4g16130' => 'spa', 'Sp6g13080' => 'spa', 'Sp7g37270' => 'spa', 'TAR371G0065' => 'tar', 'TAR376G0340' => 'tar', 'TAR376G0435' => 'tar', 'TAR381G0002' => 'tar', 'TAR381G1236' => 'tar', 'TAR624G0055' => 'tar', 'TAR624G0324' => 'tar', 'TAR624G0696' => 'tar', 'TAR624G0906' => 'tar', 'TAR625G0107' => 'tar', 'TAR626G0015' => 'tar', 'TAR626G1356' => 'tar', 'TAR627G0888' => 'tar', 'TAR628G0399' => 'tar', 'TAR628G1327' => 'tar', 'TAR629G2831' => 'tar', 'TAR629G2874' => 'tar', 'TAR633G1432' => 'tar', 'TAR633G2771' => 'tar', 'THA.LOC104803394' => 'tha', 'THA.LOC104805153' => 'tha', 'THA.LOC104806784' => 'tha', 'THA.LOC104810473' => 'tha', 'THA.LOC104813100' => 'tha', 'THA.LOC104814215' => 'tha', 'THA.LOC104815554' => 'tha', 'THA.LOC104820544' => 'tha', 'THA.LOC104824754' => 'tha', 'THA.LOC104827717' => 'tha', 'Thecc.02G031400' => 'tca', 'Thecc.02G055900' => 'tca', 'Thecc.02G350800' => 'tca', 'Thecc.06G150900' => 'tca', 'Thecc.06G186600' => 'tca', 'Thecc.07G089600' => 'tca', 'Thecc.08G020400' => 'tca', 'Thecc.08G182100' => 'tca', 'Thhalv10000873m.g' => 'esa', 'Thhalv10004185m.g' => 'esa', 'Thhalv10006981m.g' => 'esa', 'Thhalv10007204m.g' => 'esa', 'Thhalv10011374m.g' => 'esa', 'Thhalv10013482m.g' => 'esa', 'Thhalv10017801m.g' => 'esa', 'Thhalv10024983m.g' => 'esa', 'TPR.G12072' => 'tpr', 'TPR.G15769' => 'tpr', 'TPR.G16504' => 'tpr', 'TPR.G16506' => 'tpr', 'TPR.G24345' => 'tpr', 'TPR.G26666' => 'tpr', 'TPR.G27320' => 'tpr', 'TPR.G31819' => 'tpr', 'TPR.G38879' => 'tpr', 'TPR.G39015' => 'tpr', 'TPR.G8819' => 'tpr', 'TWI09G0924' => 'twi', 'TWI12G0811' => 'twi', 'TWI12G1294' => 'twi', 'TWI31G0150' => 'twi', 'TWI36G1262' => 'twi', 'TWI38G1287' => 'twi', 'TWI38G1633' => 'twi', 'TWI38G1982' => 'twi', 'TWI39G0116' => 'twi', 'TWI60G1011' => 'twi', 'TWI63G0171' => 'twi', 'TWI73G0839' => 'twi', 'TWI79G1511' => 'twi', 'unitig_0.g915' => 'ugi', 'unitig_0.g916' => 'ugi', 'unitig_21.g20219' => 'ugi', 'unitig_21.g20416' => 'ugi', 'unitig_578.g16132' => 'ugi', 'unitig_578.g16718' => 'ugi', 'unitig_62.g23481' => 'ugi', 'unitig_744.g24535' => 'ugi', 'unitig_749.g13525' => 'ugi', 'vmacro01248' => 'vma', 'vmacro02290' => 'vma', 'vmacro10946' => 'vma', 'vmacro11865' => 'vma', 'vmacro12493' => 'vma', 'vmacro17322' => 'vma', 'vmacro21599' => 'vma', 'vmacro23041' => 'vma', 'VMungo0251G0004' => 'vmu', 'VMungo0251G2639' => 'vmu', 'VMungo0251G2967' => 'vmu', 'VMungo0540G0864' => 'vmu', 'VMungo0540G1569' => 'vmu', 'VMungo0647G0317' => 'vmu', 'VMungo0720G1373' => 'vmu', 'VMungo0720G1508' => 'vmu', 'VMungo1080G0485' => 'vmu', 'VMungo1215G3177' => 'vmu', 'Zm00001eb112600' => 'zma', 'Zm00001eb120220' => 'zma', 'Zm00001eb153240' => 'zma', 'Zm00001eb168880' => 'zma', 'Zm00001eb213920' => 'zma', 'Zm00001eb228280' => 'zma', 'Zm00001eb254580' => 'zma', 'Zm00001eb272180' => 'zma', 'Zm00001eb293190' => 'zma', 'Zm00001eb322930' => 'zma', 'Zm00001eb353360' => 'zma', 'Zm00001eb353390' => 'zma', 'Zm00001eb353430' => 'zma', 'Zm00001eb353440' => 'zma', 'Zm00001eb353780' => 'zma' ), 'gf_id' => 'HOM05D000499', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000499' ), 'data_identifier' => 'HOM05D000499', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000499', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1066', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p29780' => 'bna', 'A02p33180' => 'bna', 'A03p16470' => 'bna', 'A03p66010' => 'bna', 'A04p25970' => 'bna', 'A06p01270' => 'bna', 'A06p46080' => 'bna', 'A07p11400' => 'bna', 'A08p01840' => 'bna', 'A08p08230' => 'bna', 'A08p25740' => 'bna', 'A09p32070' => 'bna', 'A09p37830' => 'bna', 'A09p42840' => 'bna', 'A09p42850' => 'bna', 'Aa31LG10G2060' => 'aar', 'Aa31LG2G7410' => 'aar', 'Aa31LG6G10200' => 'aar', 'Aa31LG6G16680' => 'aar', 'Aa31LG6G8470' => 'aar', 'Aa31LG9G12730' => 'aar', 'Aa31LG9G13680' => 'aar', 'Aa31LG9G14920' => 'aar', 'Aa31LG9G6650' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4977' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5467' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3254' => 'aag', 'Actinidia02578' => 'ach', 'Actinidia07693' => 'ach', 'Actinidia08413' => 'ach', 'Actinidia08414' => 'ach', 'Actinidia15289' => 'ach', 'Actinidia19871' => 'ach', 'Actinidia21475' => 'ach', 'Actinidia22576' => 'ach', 'Actinidia28327' => 'ach', 'Actinidia32491' => 'ach', 'Actinidia39463' => 'ach', 'Actinidia39571' => 'ach', 'Ah.01g013750' => 'amhyb', 'Ah.01g023210' => 'amhyb', 'Ah.04g164850' => 'amhyb', 'Ah.05g178060' => 'amhyb', 'Ah.07g204270' => 'amhyb', 'Ah.07g208480' => 'amhyb', 'Ah.09g237410' => 'amhyb', 'Ah.14g089460' => 'amhyb', 'AL1G41790' => 'aly', 'AL1G49050' => 'aly', 'AL1G53810' => 'aly', 'AL1G61400' => 'aly', 'AL4G18580' => 'aly', 'AL5G12510' => 'aly', 'AL5G12540' => 'aly', 'AL6G43230' => 'aly', 'AL7G10370' => 'aly', 'AL7G19250' => 'aly', 'AL8G12240' => 'aly', 'AL8G18540' => 'aly', 'Aqoxy1G02409' => 'aox', 'Aqoxy2G03993' => 'aox', 'Aqoxy3G03357' => 'aox', 'Aqoxy4G00785' => 'aox', 'Aqoxy5G02598' => 'aox', 'Aqoxy6G00132' => 'aox', 'Aqoxy7G01776' => 'aox', 'Aqoxy7G02316' => 'aox', 'Aqoxy7G03973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.12AFKW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B8730' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27IQR1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3F75VG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3RE0GA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41TCQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.527VTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FIR39' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5W8UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DA38EV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ63HS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H1I32C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HC27T5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4M8AP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7N3CZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9UVDZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LS1NQA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT1D4B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SKC4TM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCFV76' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF9Q1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQWD9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1ZM88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WE07RT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YCK7VH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJE6Q6' => 'arhy', 'AT1G28240' => 'ath', 'AT1G34550' => 'ath', 'AT1G53040' => 'ath', 'AT2G02910' => 'ath', 'AT4G09630' => 'ath', 'AT4G38500' => 'ath', 'AT5G42660' => 'ath', 'AT5G46220' => 'ath', 'ATR0152G026' => 'atr', 'ATR0564G343' => 'atr', 'ATR0706G151' => 'atr', 'ATR0733G207' => 'atr', 'ATR0751G234' => 'atr', 'ATR0807G048' => 'atr', 'ATR1091G084' => 'atr', 'Atru.chr10.1229' => 'acertr', 'Atru.chr10.1230' => 'acertr', 'Atru.chr10.1874' => 'acertr', 'Atru.chr11.1808' => 'acertr', 'Atru.chr13.1795' => 'acertr', 'Atru.chr13.570' => 'acertr', 'Atru.chr2.2608' => 'acertr', 'Atru.chr2.2609' => 'acertr', 'Atru.chr5.3428' => 'acertr', 'Atru.chr8.1171' => 'acertr', 'AUR62004651' => 'cqu', 'AUR62008675' => 'cqu', 'AUR62010014' => 'cqu', 'AUR62013004' => 'cqu', 'AUR62014825' => 'cqu', 'AUR62015015' => 'cqu', 'AUR62015151' => 'cqu', 'AUR62017020' => 'cqu', 'AUR62019422' => 'cqu', 'AUR62023570' => 'cqu', 'AUR62025571' => 'cqu', 'AUR62029098' => 'cqu', 'AUR62033863' => 'cqu', 'AUR62034296' => 'cqu', 'AUR62040075' => 'cqu', 'BcaB02g07334' => 'bca', 'BcaB02g10575' => 'bca', 'BcaB03g12119' => 'bca', 'BcaB03g12120' => 'bca', 'BcaB03g13945' => 'bca', 'BcaB04g17123' => 'bca', 'BcaB04g17867' => 'bca', 'BcaB04g19839' => 'bca', 'BcaB07g30317' => 'bca', 'BcaB07g32432' => 'bca', 'BcaB07g33362' => 'bca', 'BcaB08g36611' => 'bca', 'BcaC01g00028' => 'bca', 'BcaC01g01356' => 'bca', 'BcaC01g02034' => 'bca', 'BcaC01g06051' => 'bca', 'BcaC03g16839' => 'bca', 'BcaC03g17176' => 'bca', 'BcaC05g26829' => 'bca', 'BcaC06g31490' => 'bca', 'BcaC06g35344' => 'bca', 'BcaC06g36570' => 'bca', 'BcaC07g37537' => 'bca', 'BcaC08g43491' => 'bca', 'BcaC08g43773' => 'bca', 'BcaNung00234' => 'bca', 'BcaNung01982' => 'bca', 'BcaNung03707' => 'bca', 'BcaNung06454' => 'bca', 'BolC2t10762H' => 'bol', 'BolC2t11191H' => 'bol', 'BolC3t14322H' => 'bol', 'BolC3t19747H' => 'bol', 'BolC3t21425H' => 'bol', 'BolC4t27800H' => 'bol', 'BolC5t31423H' => 'bol', 'BolC6t35951H' => 'bol', 'BolC6t36282H' => 'bol', 'BolC7t40678H' => 'bol', 'BolC7t40679H' => 'bol', 'BolC7t42222H' => 'bol', 'BolC7t43492H' => 'bol', 'BolC7t46785H' => 'bol', 'BolC8t47853H' => 'bol', 'BolC9t56805H' => 'bol', 'BraA02t08000Z' => 'bra', 'BraA02t08341Z' => 'bra', 'BraA03t10936Z' => 'bra', 'BraA03t15657Z' => 'bra', 'BraA04t18100Z' => 'bra', 'BraA05t20523Z' => 'bra', 'BraA06t23353Z' => 'bra', 'BraA06t27473Z' => 'bra', 'BraA06t27769Z' => 'bra', 'BraA07t28928Z' => 'bra', 'BraA08t32236Z' => 'bra', 'BraA08t32841Z' => 'bra', 'BraA08t34524Z' => 'bra', 'BraA09t38742Z' => 'bra', 'BraA09t39295Z' => 'bra', 'C02p47180' => 'bna', 'C02p50990' => 'bna', 'C03p19360' => 'bna', 'C03p74950' => 'bna', 'C03p91000' => 'bna', 'C04p63260' => 'bna', 'C05p27050' => 'bna', 'C06p08750' => 'bna', 'C06p11490' => 'bna', 'C07p02820' => 'bna', 'C07p17180' => 'bna', 'C07p29440' => 'bna', 'C07p63730' => 'bna', 'C09p39260' => 'bna', 'CAN.G1164.34' => 'can', 'CAN.G1164.39' => 'can', 'CAN.G1530.3' => 'can', 'CAN.G162.61' => 'can', 'CAN.G176.6' => 'can', 'CAN.G289.49' => 'can', 'CAN.G370.21' => 'can', 'CAN.G370.22' => 'can', 'CAN.G371.117' => 'can', 'CAN.G58.37' => 'can', 'CAN.G588.98' => 'can', 'CANSAT21G2266' => 'cansat', 'CANSAT25G2799' => 'cansat', 'CANSAT35G0862' => 'cansat', 'CANSAT35G1704' => 'cansat', 'CANSAT35G1760' => 'cansat', 'CANSAT56G3971' => 'cansat', 'CANSAT56G4116' => 'cansat', 'CANSAT80G1259' => 'cansat', 'CARHR027730' => 'chi', 'CARHR033880' => 'chi', 'CARHR043270' => 'chi', 'CARHR145330' => 'chi', 'CARHR145340' => 'chi', 'CARHR175570' => 'chi', 'CARHR181570' => 'chi', 'CARHR258470' => 'chi', 'CARHR260490' => 'chi', 'CARHR294220' => 'chi', 'Carub.0001s2668' => 'cru', 'Carub.0001s3257' => 'cru', 'Carub.0001s4220' => 'cru', 'Carub.0005s0179' => 'cru', 'Carub.0006s2807' => 'cru', 'Carub.0007s0039' => 'cru', 'Carub.0008s0169' => 'cru', 'Carub.0008s0636' => 'cru', 'Ca_00338_v3' => 'car', 'Ca_00542_v3' => 'car', 'Ca_01844_v3' => 'car', 'Ca_10611_v3' => 'car', 'Ca_13326_v3' => 'car', 'Ca_17944_v3' => 'car', 'Ca_18546_v3' => 'car', 'Ca_24219_v3' => 'car', 'Ca_29972_v3' => 'car', 'CBR_g3681' => 'cbr', 'CBR_g40021' => 'cbr', 'Cc01_g08140' => 'ccan', 'Cc02_g13410' => 'ccan', 'Cc02_g37480' => 'ccan', 'Cc05_g12030' => 'ccan', 'Cc09_g03370' => 'ccan', 'Cc09_g10300' => 'ccan', 'Cc10_g03530' => 'ccan', 'Cc10_g11380' => 'ccan', 'CDE01G0176' => 'cde', 'CDE02G0675' => 'cde', 'CDE02G0942' => 'cde', 'CDE02G1153' => 'cde', 'CDE02G4177' => 'cde', 'CDE04G2117' => 'cde', 'CDE04G2736' => 'cde', 'CDE08G1161' => 'cde', 'CDE09G1238' => 'cde', 'Cfa000467' => 'cfa', 'Cfa000947' => 'cfa', 'Cfa004969' => 'cfa', 'Cfa005284' => 'cfa', 'Cfa008993' => 'cfa', 'Cfa018187' => 'cfa', 'Cfa018454' => 'cfa', 'Cfa020585' => 'cfa', 'Ciclev10000424m.g' => 'ccl', 'Ciclev10003605m.g' => 'ccl', 'Ciclev10007828m.g' => 'ccl', 'Ciclev10014620m.g' => 'ccl', 'Ciclev10015169m.g' => 'ccl', 'Ciclev10018291m.g' => 'ccl', 'Ciclev10028256m.g' => 'ccl', 'Ciclev10033822m.g' => 'ccl', 'CiPaw.05G060300' => 'cil', 'CiPaw.05G085000' => 'cil', 'CiPaw.06G083700' => 'cil', 'CiPaw.06G120300' => 'cil', 'CiPaw.09G060500' => 'cil', 'CiPaw.09G123800' => 'cil', 'CiPaw.11G169700' => 'cil', 'CiPaw.12G118300' => 'cil', 'CiPaw.15G071000' => 'cil', 'CiPaw.15G081900' => 'cil', 'ClCG01G024610' => 'cla', 'ClCG03G006070' => 'cla', 'ClCG05G019250' => 'cla', 'ClCG09G009500' => 'cla', 'ClCG11G008200' => 'cla', 'ClCG11G018080' => 'cla', 'COL.COLO4_17373' => 'col', 'COL.COLO4_22994' => 'col', 'COL.COLO4_26389' => 'col', 'COL.COLO4_27170' => 'col', 'COL.COLO4_31074' => 'col', 'COL.COLO4_31465' => 'col', 'COL.COLO4_36438' => 'col', 'COL.COLO4_36439' => 'col', 'Cpa.g.c38781' => 'cpa', 'Cpa.g.sc128.12' => 'cpa', 'Cpa.g.sc166.7' => 'cpa', 'Cpa.g.sc166.8' => 'cpa', 'Cpa.g.sc20.111' => 'cpa', 'Cpa.g.sc27.31' => 'cpa', 'Cpa.g.sc64.36' => 'cpa', 'Cpa.g.sc64.37' => 'cpa', 'Cpa.g.sc66.49' => 'cpa', 'Cpa.g.sc80.64' => 'cpa', 'CsaV3_1G012320' => 'csa', 'CsaV3_2G008480' => 'csa', 'CsaV3_2G033450' => 'csa', 'CsaV3_3G044830' => 'csa', 'CsaV3_4G033710' => 'csa', 'CsaV3_6G051730' => 'csa', 'CsaV3_7G025350' => 'csa', 'CSS0001067' => 'camsi', 'CSS0005996' => 'camsi', 'CSS0006590' => 'camsi', 'CSS0009673' => 'camsi', 'CSS0010201' => 'camsi', 'CSS0010549' => 'camsi', 'CSS0011364' => 'camsi', 'CSS0014473' => 'camsi', 'CSS0014961' => 'camsi', 'CSS0020191' => 'camsi', 'CSS0021165' => 'camsi', 'CSS0022306' => 'camsi', 'CSS0030591' => 'camsi', 'CSS0030696' => 'camsi', 'CSS0032653' => 'camsi', 'CSS0037487' => 'camsi', 'CSS0041102' => 'camsi', 'CSS0041261' => 'camsi', 'CSS0046246' => 'camsi', 'CSS0049256' => 'camsi', 'DCAR_004075' => 'dca', 'DCAR_011538' => 'dca', 'DCAR_019553' => 'dca', 'DCAR_020952' => 'dca', 'DCAR_021739' => 'dca', 'DCAR_027407' => 'dca', 'DCAR_027913' => 'dca', 'DCAR_028066' => 'dca', 'Dinv05899' => 'din', 'Dinv07563' => 'din', 'Dinv08010' => 'din', 'Dinv14125' => 'din', 'Dinv20172' => 'din', 'Dinv30743' => 'din', 'Dinv31229' => 'din', 'Dinv34162' => 'din', 'Dinv36028' => 'din', 'Dinv39368' => 'din', 'Dinv40565' => 'din', 'Dinv41706' => 'din', 'Duzib052G0089' => 'dzi', 'Duzib116G0641' => 'dzi', 'Duzib132G0069' => 'dzi', 'Duzib132G1219' => 'dzi', 'Duzib147G0278' => 'dzi', 'Duzib160G0480' => 'dzi', 'Duzib170G0661' => 'dzi', 'Duzib177G0591' => 'dzi', 'Duzib187G1353' => 'dzi', 'Duzib192G0858' => 'dzi', 'Duzib192G0883' => 'dzi', 'Duzib213G0506' => 'dzi', 'Duzib235G0289' => 'dzi', 'Duzib251G0422' => 'dzi', 'ECA232G3898' => 'eca', 'ECA233G5950' => 'eca', 'ECA234G1699' => 'eca', 'ECA234G2421' => 'eca', 'ECA236G0426' => 'eca', 'ECA236G4331' => 'eca', 'ECA248G2573' => 'eca', 'EL10Ac1g00077' => 'bvu', 'EL10Ac1g01746' => 'bvu', 'EL10Ac2g03464' => 'bvu', 'EL10Ac4g08176' => 'bvu', 'EL10Ac7g17521' => 'bvu', 'EL10Ac8g20386' => 'bvu', 'EL10Ac9g21343' => 'bvu', 'EL10Ac9g22688' => 'bvu', 'Eucgr.B03434' => 'egr', 'Eucgr.D00618' => 'egr', 'Eucgr.E02395' => 'egr', 'Eucgr.F01129' => 'egr', 'Eucgr.F02622' => 'egr', 'Eucgr.F04207' => 'egr', 'FAN01G0570' => 'fan', 'FAN03G3351' => 'fan', 'FAN06G3702' => 'fan', 'FAN07G2149' => 'fan', 'FAN10G3758' => 'fan', 'FAN11G1170' => 'fan', 'FAN11G2050' => 'fan', 'FAN11G2724' => 'fan', 'FAN12G1700' => 'fan', 'FAN12G2028' => 'fan', 'FAN15G1160' => 'fan', 'FAN15G3063' => 'fan', 'FAN16G2540' => 'fan', 'FAN16G3077' => 'fan', 'FAN16G3624' => 'fan', 'FAN17G0221' => 'fan', 'FAN20G2492' => 'fan', 'FAN20G2905' => 'fan', 'FAN21G0548' => 'fan', 'FAN21G1300' => 'fan', 'FAN22G0077' => 'fan', 'FAN22G1315' => 'fan', 'FAN24G1280' => 'fan', 'FAN24G1445' => 'fan', 'FAN24G3527' => 'fan', 'FAN25G0464' => 'fan', 'FAN25G2885' => 'fan', 'FAN25G3270' => 'fan', 'FAN27G1101' => 'fan', 'FAN27G2846' => 'fan', 'FAN27G3524' => 'fan', 'FvH4_2g11770' => 'fve', 'FvH4_2g15630' => 'fve', 'FvH4_3g05570' => 'fve', 'FvH4_3g09110' => 'fve', 'FvH4_3g19940' => 'fve', 'FvH4_4g04821' => 'fve', 'FvH4_4g31480' => 'fve', 'FvH4_7g01740' => 'fve', 'Glyma.05G130400' => 'gma', 'Glyma.05G156400' => 'gma', 'Glyma.07G197000' => 'gma', 'Glyma.08G085151' => 'gma', 'Glyma.08G114500' => 'gma', 'Glyma.08G300400' => 'gma', 'Glyma.10G215800' => 'gma', 'Glyma.12G224400' => 'gma', 'Glyma.13G179300' => 'gma', 'Glyma.13G218151' => 'gma', 'Glyma.13G238800' => 'gma', 'Glyma.13G276900' => 'gma', 'Glyma.14G078200' => 'gma', 'Glyma.15G074500' => 'gma', 'Glyma.15G094100' => 'gma', 'Glyma.17G247200' => 'gma', 'Glyma.18G120100' => 'gma', 'Glyma.20G176000' => 'gma', 'Gohir.A01G063600' => 'ghi', 'Gohir.A01G170301' => 'ghi', 'Gohir.A02G060500' => 'ghi', 'Gohir.A05G133850' => 'ghi', 'Gohir.A05G161400' => 'ghi', 'Gohir.A06G012900' => 'ghi', 'Gohir.A06G035901' => 'ghi', 'Gohir.A06G127100' => 'ghi', 'Gohir.A06G210500' => 'ghi', 'Gohir.A08G008650' => 'ghi', 'Gohir.A09G072700' => 'ghi', 'Gohir.A09G088301' => 'ghi', 'Gohir.A10G040600' => 'ghi', 'Gohir.A12G036300' => 'ghi', 'Gohir.A12G143350' => 'ghi', 'Gohir.A12G165500' => 'ghi', 'Gohir.A13G145700' => 'ghi', 'Gohir.D01G050000' => 'ghi', 'Gohir.D01G051366' => 'ghi', 'Gohir.D01G161350' => 'ghi', 'Gohir.D02G065900' => 'ghi', 'Gohir.D05G164200' => 'ghi', 'Gohir.D05G355500' => 'ghi', 'Gohir.D06G010400' => 'ghi', 'Gohir.D06G111250' => 'ghi', 'Gohir.D06G132000' => 'ghi', 'Gohir.D06G210500' => 'ghi', 'Gohir.D07G165675' => 'ghi', 'Gohir.D08G062240' => 'ghi', 'Gohir.D08G086101' => 'ghi', 'Gohir.D08G138060' => 'ghi', 'Gohir.D09G072300' => 'ghi', 'Gohir.D10G041400' => 'ghi', 'Gohir.D11G191020' => 'ghi', 'Gohir.D11G212066' => 'ghi', 'Gohir.D12G036300' => 'ghi', 'Gohir.D12G168600' => 'ghi', 'Gohir.D13G150600' => 'ghi', 'Gorai.001G057300' => 'gra', 'Gorai.002G069900' => 'gra', 'Gorai.002G200000' => 'gra', 'Gorai.003G067600' => 'gra', 'Gorai.005G074800' => 'gra', 'Gorai.006G087300' => 'gra', 'Gorai.008G037500' => 'gra', 'Gorai.008G181400' => 'gra', 'Gorai.009G169400' => 'gra', 'Gorai.009G387900' => 'gra', 'Gorai.010G013300' => 'gra', 'Gorai.010G153800' => 'gra', 'Gorai.010G255800' => 'gra', 'Gorai.011G043700' => 'gra', 'Gorai.011G198900' => 'gra', 'Gorai.013G168400' => 'gra', 'GSVIVG01005212001' => 'vvi', 'GSVIVG01006163001' => 'vvi', 'GSVIVG01009625001' => 'vvi', 'GSVIVG01014338001' => 'vvi', 'GSVIVG01020005001' => 'vvi', 'GSVIVG01021450001' => 'vvi', 'GSVIVG01023975001' => 'vvi', 'GSVIVG01034490001' => 'vvi', 'HanXRQChr04g0112071' => 'han', 'HanXRQChr05g0131151' => 'han', 'HanXRQChr09g0262371' => 'han', 'HanXRQChr09g0268401' => 'han', 'HanXRQChr10g0279241' => 'han', 'HanXRQChr10g0297961' => 'han', 'HanXRQChr11g0326231' => 'han', 'HanXRQChr11g0328471' => 'han', 'HanXRQChr16g0507941' => 'han', 'HanXRQChr17g0560211' => 'han', 'Haze_02108' => 'cav', 'Haze_02428' => 'cav', 'Haze_05593' => 'cav', 'Haze_06448' => 'cav', 'Haze_09427' => 'cav', 'Haze_12022' => 'cav', 'Haze_17612' => 'cav', 'Haze_17928' => 'cav', 'Hma1.2p1_0032F.1_g019250' => 'hma', 'Hma1.2p1_0163F.1_g072690' => 'hma', 'Hma1.2p1_0265F.1_g106710' => 'hma', 'Hma1.2p1_0286F.1_g113970' => 'hma', 'Hma1.2p1_0363F.1_g136640' => 'hma', 'Hma1.2p1_0584F.1_g183470' => 'hma', 'Hma1.2p1_0885F.1_g232570' => 'hma', 'HPP92_006022' => 'vpl', 'HPP92_007320' => 'vpl', 'HPP92_011521' => 'vpl', 'HPP92_019387' => 'vpl', 'HPP92_024038' => 'vpl', 'Hund05891' => 'sun', 'Hund06450' => 'sun', 'Hund12053' => 'sun', 'Hund16800' => 'sun', 'Hund21222' => 'sun', 'Hund22896' => 'sun', 'Hund23746' => 'sun', 'Hund27083' => 'sun', 'Lalb_Chr02g0141831' => 'lal', 'Lalb_Chr02g0141841' => 'lal', 'Lalb_Chr05g0220411' => 'lal', 'Lalb_Chr06g0162081' => 'lal', 'Lalb_Chr09g0327651' => 'lal', 'Lalb_Chr13g0295051' => 'lal', 'Lalb_Chr15g0086801' => 'lal', 'Lalb_Chr16g0383781' => 'lal', 'Lalb_Chr16g0383791' => 'lal', 'Lalb_Chr18g0055441' => 'lal', 'Lalb_Chr18g0059611' => 'lal', 'Lalb_Chr20g0109661' => 'lal', 'Lalb_Chr20g0109831' => 'lal', 'Lalb_Chr20g0121871' => 'lal', 'Lalb_Chr22g0355361' => 'lal', 'Lalb_Chr25g0286371' => 'lal', 'Lj1A1187G43' => 'lonja', 'Lj1A1205T50' => 'lonja', 'Lj1A800G33' => 'lonja', 'Lj1C1187T7' => 'lonja', 'Lj1C843T11' => 'lonja', 'Lj1g0010940' => 'lja', 'Lj2A288T69' => 'lonja', 'Lj3g0024276' => 'lja', 'Lj4A47T76' => 'lonja', 'Lj4g0005805' => 'lja', 'Lj4g0006097' => 'lja', 'Lj4g0008528' => 'lja', 'Lj4g0024907' => 'lja', 'Lj5g0012472' => 'lja', 'Lj5g0018648' => 'lja', 'Lj6C789G1' => 'lonja', 'Lj6g0004000' => 'lja', 'Lj7A292G67' => 'lonja', 'Lj7A292T64' => 'lonja', 'Lj9A400T58' => 'lonja', 'Lsat_1_v5_gn_1_126181' => 'lsa', 'Lsat_1_v5_gn_4_123041' => 'lsa', 'Lsat_1_v5_gn_4_133620' => 'lsa', 'Lsat_1_v5_gn_4_53221' => 'lsa', 'Lsat_1_v5_gn_4_71961' => 'lsa', 'Lsat_1_v5_gn_7_105241' => 'lsa', 'Lsat_1_v5_gn_7_21361' => 'lsa', 'Lsat_1_v5_gn_7_28860' => 'lsa', 'Lsat_1_v5_gn_7_31260' => 'lsa', 'Lsat_1_v5_gn_8_52801' => 'lsa', 'Manes.02G191400' => 'mes', 'Manes.03G110100' => 'mes', 'Manes.04G071100' => 'mes', 'Manes.05G100500' => 'mes', 'Manes.05G164700' => 'mes', 'Manes.15G087000' => 'mes', 'Manes.15G121500' => 'mes', 'Manes.16G028300' => 'mes', 'Manes.17G046100' => 'mes', 'Manes.17G069800' => 'mes', 'Manes.18G100500' => 'mes', 'Mapoly0002s0109' => 'mpo', 'Mapoly0024s0007' => 'mpo', 'Mapoly0089s0032' => 'mpo', 'MBI04_g42241_MAGBIO' => 'mbi', 'MBI05_g11988_MAGBIO' => 'mbi', 'MBI05_g35452_MAGBIO' => 'mbi', 'MBI07_g30179_MAGBIO' => 'mbi', 'MBI07_g35859_MAGBIO' => 'mbi', 'MBI07_g35860_MAGBIO' => 'mbi', 'MBI07_g37166_MAGBIO' => 'mbi', 'MBI08_g18172_MAGBIO' => 'mbi', 'MBI09_g08441_MAGBIO' => 'mbi', 'MBI13_g01676_MAGBIO' => 'mbi', 'MBI14_g42955_MAGBIO' => 'mbi', 'MBI16_g13161_MAGBIO' => 'mbi', 'MBI17_g27204_MAGBIO' => 'mbi', 'MBI19_g21595_MAGBIO' => 'mbi', 'MD00G1148400' => 'mdo', 'MD02G1301200' => 'mdo', 'MD03G1227800' => 'mdo', 'MD05G1041100' => 'mdo', 'MD05G1124800' => 'mdo', 'MD05G1284000' => 'mdo', 'MD05G1338800' => 'mdo', 'MD05G1338900' => 'mdo', 'MD07G1022800' => 'mdo', 'MD10G1047500' => 'mdo', 'MD10G1127500' => 'mdo', 'MD10G1262300' => 'mdo', 'MD10G1293800' => 'mdo', 'MD16G1074300' => 'mdo', 'Medtr1g021670' => 'mtr', 'Medtr1g096320' => 'mtr', 'Medtr2g013690' => 'mtr', 'Medtr2g019450' => 'mtr', 'Medtr2g085170' => 'mtr', 'Medtr4g088785' => 'mtr', 'Medtr8g055930' => 'mtr', 'Medtr8g085850' => 'mtr', 'MELO3C002605.2' => 'cme', 'MELO3C003891.2' => 'cme', 'MELO3C004012.2' => 'cme', 'MELO3C007134.2' => 'cme', 'MELO3C008118.2' => 'cme', 'MELO3C016700.2' => 'cme', 'MELO3C024127.2' => 'cme', 'MELO3C033361.2' => 'cme', 'MELO3C033362.2' => 'cme', 'Migut.C00430' => 'egut', 'Migut.C01246' => 'egut', 'Migut.E00101' => 'egut', 'Migut.H01486' => 'egut', 'Migut.H01939' => 'egut', 'Migut.K00360' => 'egut', 'Migut.M00910' => 'egut', 'Migut.M01139' => 'egut', 'Migut.N02677' => 'egut', 'MSTRG.13252' => 'ama', 'MSTRG.14701' => 'ama', 'MSTRG.1521' => 'ama', 'MSTRG.15884' => 'ama', 'MSTRG.16242' => 'ama', 'MSTRG.22285' => 'ama', 'MSTRG.22444' => 'ama', 'MSTRG.2349' => 'ama', 'MSTRG.26308' => 'ama', 'MSTRG.28296' => 'ama', 'MSTRG.9895' => 'ama', 'Nitab4.5_0000110g0060' => 'nta', 'Nitab4.5_0000420g0130' => 'nta', 'Nitab4.5_0000422g0030' => 'nta', 'Nitab4.5_0000560g0180' => 'nta', 'Nitab4.5_0000703g0100' => 'nta', 'Nitab4.5_0000786g0200' => 'nta', 'Nitab4.5_0001336g0020' => 'nta', 'Nitab4.5_0001796g0030' => 'nta', 'Nitab4.5_0003348g0060' => 'nta', 'Nitab4.5_0003698g0040' => 'nta', 'Nitab4.5_0003942g0090' => 'nta', 'Nitab4.5_0004775g0070' => 'nta', 'Nitab4.5_0004864g0030' => 'nta', 'Nitab4.5_0005615g0020' => 'nta', 'Nitab4.5_0009288g0030' => 'nta', 'Nitab4.5_0009341g0010' => 'nta', 'Nitab4.5_0009535g0010' => 'nta', 'Nn1g03995' => 'nnu', 'Nn1g04100' => 'nnu', 'Nn1g06530' => 'nnu', 'Nn3g16404' => 'nnu', 'Nn3g17212' => 'nnu', 'Nn3g20776' => 'nnu', 'Nn3g21923' => 'nnu', 'Nn5g27737' => 'nnu', 'Nn5g29461' => 'nnu', 'Nn7g38355' => 'nnu', 'Nn8g39873' => 'nnu', 'Oeu000548.2' => 'oeu', 'Oeu004672.1' => 'oeu', 'Oeu015605.2' => 'oeu', 'Oeu016092.1' => 'oeu', 'Oeu017879.3' => 'oeu', 'Oeu024910.1' => 'oeu', 'Oeu028965.1' => 'oeu', 'Oeu031269.1' => 'oeu', 'Oeu031270.1' => 'oeu', 'Oeu032535.1' => 'oeu', 'Oeu034151.1' => 'oeu', 'Oeu034152.1' => 'oeu', 'Oeu034588.2' => 'oeu', 'Oeu050846.1' => 'oeu', 'Oeu050849.2' => 'oeu', 'Oeu051063.2' => 'oeu', 'Oeu052368.1' => 'oeu', 'Oeu052370.1' => 'oeu', 'Os01g0210400' => 'osa', 'Os01g0304300' => 'osa', 'Os01g0749100' => 'osa', 'Os02g0745800' => 'osa', 'Os03g0769050' => 'osa', 'Os05g0531500' => 'osa', 'Os06g0724300' => 'osa', 'Os11g0198100' => 'osa', 'Peaxi162Scf00069g01425' => 'pax', 'Peaxi162Scf00280g00811' => 'pax', 'Peaxi162Scf00310g00615' => 'pax', 'Peaxi162Scf00362g00542' => 'pax', 'Peaxi162Scf00461g00310' => 'pax', 'Peaxi162Scf00530g00118' => 'pax', 'Peaxi162Scf00541g00057' => 'pax', 'Peaxi162Scf00661g00017' => 'pax', 'Peaxi162Scf00926g00027' => 'pax', 'Peaxi162Scf01064g00263' => 'pax', 'Peaxi162Scf01211g00135' => 'pax', 'PGR004G2336' => 'pgr', 'PGR042G0327' => 'pgr', 'PGR042G1957' => 'pgr', 'PGR042G2003' => 'pgr', 'PGR042G3929' => 'pgr', 'PGR083G1137' => 'pgr', 'PGR083G1364' => 'pgr', 'PGSC0003DMG400003381' => 'stu', 'PGSC0003DMG400003417' => 'stu', 'PGSC0003DMG400008981' => 'stu', 'PGSC0003DMG400012417' => 'stu', 'PGSC0003DMG400012823' => 'stu', 'PGSC0003DMG400016885' => 'stu', 'PGSC0003DMG400022812' => 'stu', 'PGSC0003DMG400029726' => 'stu', 'PGSC0003DMG401009243' => 'stu', 'PGSC0003DMG401031505' => 'stu', 'PGSC0003DMG402031505' => 'stu', 'Phvul.001G017600' => 'pvu', 'Phvul.002G193500' => 'pvu', 'Phvul.002G228900' => 'pvu', 'Phvul.002G236800' => 'pvu', 'Phvul.003G049500' => 'pvu', 'Phvul.005G072000' => 'pvu', 'Phvul.006G164800' => 'pvu', 'Phvul.006G185100' => 'pvu', 'Phvul.007G090000' => 'pvu', 'Potri.001G399800' => 'ptr', 'Potri.002G149900' => 'ptr', 'Potri.004G044100' => 'ptr', 'Potri.004G177600' => 'ptr', 'Potri.009G138000' => 'ptr', 'Potri.010G094000' => 'ptr', 'Potri.011G053000' => 'ptr', 'Potri.011G119300' => 'ptr', 'Potri.013G113700' => 'ptr', 'Potri.018G107800' => 'ptr', 'Potri.019G084100' => 'ptr', 'Pp3c14_23720' => 'ppa', 'Pp3c16_6340' => 'ppa', 'Pp3c23_13420' => 'ppa', 'Pp3c24_2740' => 'ppa', 'Pp3c25_860' => 'ppa', 'Pp3c8_21750' => 'ppa', 'Prupe.1G273000' => 'ppe', 'Prupe.1G273700' => 'ppe', 'Prupe.1G274100' => 'ppe', 'Prupe.2G023300' => 'ppe', 'Prupe.4G048000' => 'ppe', 'Prupe.4G080400' => 'ppe', 'Prupe.4G181200' => 'ppe', 'Prupe.8G056900' => 'ppe', 'Prupe.8G168700' => 'ppe', 'Psat1g189080' => 'psa', 'Psat1g204760' => 'psa', 'Psat4g175560' => 'psa', 'Psat4g177720' => 'psa', 'Psat5g244240' => 'psa', 'Psat6g010720' => 'psa', 'Psat6g187200' => 'psa', 'Psat7g072040' => 'psa', 'PSO017G3501' => 'pso', 'PSO063G2148' => 'pso', 'PSO063G5608' => 'pso', 'PSO210G6392' => 'pso', 'PSO541G2319' => 'pso', 'PSO541G2836' => 'pso', 'PSO541G4012' => 'pso', 'PSO541G6253' => 'pso', 'PSO675G0580' => 'pso', 'PSO675G0856' => 'pso', 'PSO675G5635' => 'pso', 'PSO675G9157' => 'pso', 'PSO832G1660' => 'pso', 'PSO832G1969' => 'pso', 'QL02p007186' => 'qlo', 'QL02p033904' => 'qlo', 'QL03p064391' => 'qlo', 'QL05p040593' => 'qlo', 'QL05p058242' => 'qlo', 'QL08p021825' => 'qlo', 'QL11p004981' => 'qlo', 'RcHm_v2.0_Chr1g0318301' => 'rch', 'RcHm_v2.0_Chr4g0418501' => 'rch', 'RcHm_v2.0_Chr4g0439971' => 'rch', 'RcHm_v2.0_Chr5g0008541' => 'rch', 'RcHm_v2.0_Chr5g0014101' => 'rch', 'RcHm_v2.0_Chr5g0014131' => 'rch', 'RcHm_v2.0_Chr5g0033621' => 'rch', 'RcHm_v2.0_Chr6g0272041' => 'rch', 'RcHm_v2.0_Chr6g0278831' => 'rch', 'Rhsim02G0130400' => 'rsi', 'Rhsim02G0171100' => 'rsi', 'Rhsim05G0053000' => 'rsi', 'Rhsim05G0053100' => 'rsi', 'Rhsim06G0096500' => 'rsi', 'Rhsim06G0096600' => 'rsi', 'Rhsim06G0199100' => 'rsi', 'Rhsim12G0062300' => 'rsi', 'Rhsim12G0062800' => 'rsi', 'Sabra02G0118600' => 'sbr', 'Sabra04G0027300' => 'sbr', 'Sabra04G0119500' => 'sbr', 'Sabra08G0112500' => 'sbr', 'Sabra11G0036800' => 'sbr', 'Sabra11G0103800' => 'sbr', 'Sabra13G0096300' => 'sbr', 'Sabra16G0262300' => 'sbr', 'Sabra18G0091700' => 'sbr', 'Sabra19G0095400' => 'sbr', 'SalBow6G3080' => 'sbo', 'SalBow7G1157' => 'sbo', 'SalBow7G2123' => 'sbo', 'SalBow7G2285' => 'sbo', 'SalBow7G3537' => 'sbo', 'SalBow8G2947' => 'sbo', 'SalBow8G4463' => 'sbo', 'SalBow8G5466' => 'sbo', 'Sc01g0001750' => 'sci', 'Sc02g0006640' => 'sci', 'Sc02g0006670' => 'sci', 'Sc04g0008220' => 'sci', 'Sc05g0006190' => 'sci', 'Sc08g0002760' => 'sci', 'Sc17g0006170' => 'sci', 'Sc22g0002050' => 'sci', 'Sc23g0001190' => 'sci', 'Sc24g0000980' => 'sci', 'Sed0006245' => 'sed', 'Sed0007543' => 'sed', 'Sed0009411' => 'sed', 'Sed0010765' => 'sed', 'Sed0012944' => 'sed', 'Sed0014682' => 'sed', 'Sed0016174' => 'sed', 'Sed0016796' => 'sed', 'Sed0020317' => 'sed', 'Sed0021467' => 'sed', 'SEGI_01316' => 'sgi', 'SEGI_03374' => 'sgi', 'SEGI_16265' => 'sgi', 'SEGI_18569' => 'sgi', 'SEGI_20351' => 'sgi', 'SEGI_26395' => 'sgi', 'SEGI_29469' => 'sgi', 'SEGI_34771' => 'sgi', 'SEGI_36769' => 'sgi', 'SEGI_37139' => 'sgi', 'SGA_v2.0_scaffold100G29687' => 'sas', 'SGA_v2.0_scaffold118G32472' => 'sas', 'SGA_v2.0_scaffold14G07051' => 'sas', 'SGA_v2.0_scaffold183G39845' => 'sas', 'SGA_v2.0_scaffold1G00174' => 'sas', 'SGA_v2.0_scaffold22G09714' => 'sas', 'SGA_v2.0_scaffold333G48992' => 'sas', 'SGA_v2.0_scaffold46G17491' => 'sas', 'SGA_v2.0_scaffold49G18294' => 'sas', 'SGA_v2.0_scaffold63G21658' => 'sas', 'SHI01741' => 'shi', 'SHI05771' => 'shi', 'SHI18077' => 'shi', 'SHI20525' => 'shi', 'SHI20527' => 'shi', 'SHI20528' => 'shi', 'SMO172G0185' => 'smo', 'SMO198G0020' => 'smo', 'SMO351G0006' => 'smo', 'SMO356G0118' => 'smo', 'SMO358G0296' => 'smo', 'SMO367G0079' => 'smo', 'SMO367G1277' => 'smo', 'Solyc01g014220.3' => 'sly', 'Solyc01g111770.2' => 'sly', 'Solyc02g078180.3' => 'sly', 'Solyc03g006430.3' => 'sly', 'Solyc03g006456.1' => 'sly', 'Solyc03g079860.2' => 'sly', 'Solyc04g079770.3' => 'sly', 'Solyc05g007430.4' => 'sly', 'Solyc07g063150.3' => 'sly', 'Solyc08g016620.3' => 'sly', 'Solyc09g057590.3' => 'sly', 'Solyc09g057600.1' => 'sly', 'Solyc10g009050.3' => 'sly', 'Solyc11g017420.2' => 'sly', 'Sopen01g053810' => 'spe', 'Sopen02g023040' => 'spe', 'Sopen03g002440' => 'spe', 'Sopen04g033350' => 'spe', 'Sopen05g003310' => 'spe', 'Sopen07g004050' => 'spe', 'Sopen07g031340' => 'spe', 'Sopen08g006990' => 'spe', 'Sopen10g004830' => 'spe', 'Sopen11g009370' => 'spe', 'Sp1g24450' => 'spa', 'Sp1g29670' => 'spa', 'Sp1g39600' => 'spa', 'Sp2g11080' => 'spa', 'Sp2g13970' => 'spa', 'Sp4g16130' => 'spa', 'Sp6g13080' => 'spa', 'Sp7g37270' => 'spa', 'TAR371G0065' => 'tar', 'TAR376G0340' => 'tar', 'TAR376G0435' => 'tar', 'TAR381G0002' => 'tar', 'TAR381G1236' => 'tar', 'TAR624G0055' => 'tar', 'TAR624G0324' => 'tar', 'TAR624G0696' => 'tar', 'TAR624G0906' => 'tar', 'TAR625G0107' => 'tar', 'TAR626G0015' => 'tar', 'TAR626G1356' => 'tar', 'TAR627G0888' => 'tar', 'TAR628G0399' => 'tar', 'TAR628G1327' => 'tar', 'TAR629G2831' => 'tar', 'TAR629G2874' => 'tar', 'TAR633G1432' => 'tar', 'TAR633G2771' => 'tar', 'THA.LOC104803394' => 'tha', 'THA.LOC104805153' => 'tha', 'THA.LOC104806784' => 'tha', 'THA.LOC104810473' => 'tha', 'THA.LOC104813100' => 'tha', 'THA.LOC104814215' => 'tha', 'THA.LOC104815554' => 'tha', 'THA.LOC104820544' => 'tha', 'THA.LOC104824754' => 'tha', 'THA.LOC104827717' => 'tha', 'Thecc.02G031400' => 'tca', 'Thecc.02G055900' => 'tca', 'Thecc.02G350800' => 'tca', 'Thecc.06G150900' => 'tca', 'Thecc.06G186600' => 'tca', 'Thecc.07G089600' => 'tca', 'Thecc.08G020400' => 'tca', 'Thecc.08G182100' => 'tca', 'Thhalv10000873m.g' => 'esa', 'Thhalv10004185m.g' => 'esa', 'Thhalv10006981m.g' => 'esa', 'Thhalv10007204m.g' => 'esa', 'Thhalv10011374m.g' => 'esa', 'Thhalv10013482m.g' => 'esa', 'Thhalv10017801m.g' => 'esa', 'Thhalv10024983m.g' => 'esa', 'TPR.G12072' => 'tpr', 'TPR.G15769' => 'tpr', 'TPR.G16504' => 'tpr', 'TPR.G16506' => 'tpr', 'TPR.G24345' => 'tpr', 'TPR.G26666' => 'tpr', 'TPR.G27320' => 'tpr', 'TPR.G31819' => 'tpr', 'TPR.G38879' => 'tpr', 'TPR.G39015' => 'tpr', 'TPR.G8819' => 'tpr', 'TWI09G0924' => 'twi', 'TWI12G0811' => 'twi', 'TWI12G1294' => 'twi', 'TWI31G0150' => 'twi', 'TWI36G1262' => 'twi', 'TWI38G1287' => 'twi', 'TWI38G1633' => 'twi', 'TWI38G1982' => 'twi', 'TWI39G0116' => 'twi', 'TWI60G1011' => 'twi', 'TWI63G0171' => 'twi', 'TWI73G0839' => 'twi', 'TWI79G1511' => 'twi', 'unitig_0.g915' => 'ugi', 'unitig_0.g916' => 'ugi', 'unitig_21.g20219' => 'ugi', 'unitig_21.g20416' => 'ugi', 'unitig_578.g16132' => 'ugi', 'unitig_578.g16718' => 'ugi', 'unitig_62.g23481' => 'ugi', 'unitig_744.g24535' => 'ugi', 'unitig_749.g13525' => 'ugi', 'vmacro01248' => 'vma', 'vmacro02290' => 'vma', 'vmacro10946' => 'vma', 'vmacro11865' => 'vma', 'vmacro12493' => 'vma', 'vmacro17322' => 'vma', 'vmacro21599' => 'vma', 'vmacro23041' => 'vma', 'VMungo0251G0004' => 'vmu', 'VMungo0251G2639' => 'vmu', 'VMungo0251G2967' => 'vmu', 'VMungo0540G0864' => 'vmu', 'VMungo0540G1569' => 'vmu', 'VMungo0647G0317' => 'vmu', 'VMungo0720G1373' => 'vmu', 'VMungo0720G1508' => 'vmu', 'VMungo1080G0485' => 'vmu', 'VMungo1215G3177' => 'vmu', 'Zm00001eb112600' => 'zma', 'Zm00001eb120220' => 'zma', 'Zm00001eb153240' => 'zma', 'Zm00001eb168880' => 'zma', 'Zm00001eb213920' => 'zma', 'Zm00001eb228280' => 'zma', 'Zm00001eb254580' => 'zma', 'Zm00001eb272180' => 'zma', 'Zm00001eb293190' => 'zma', 'Zm00001eb322930' => 'zma', 'Zm00001eb353360' => 'zma', 'Zm00001eb353390' => 'zma', 'Zm00001eb353430' => 'zma', 'Zm00001eb353440' => 'zma', 'Zm00001eb353780' => 'zma' ) $gf_id = 'HOM05D000499' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000499' ) $data_identifier = 'HOM05D000499' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 29, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 12, 'amhyb' => (int) 8, 'aly' => (int) 12, 'aox' => (int) 9, 'arhy' => (int) 26, 'ath' => (int) 8, 'atr' => (int) 7, 'acertr' => (int) 10, 'cqu' => (int) 15, 'bca' => (int) 29, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 11, 'cansat' => (int) 8, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 9, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 8, 'cpa' => (int) 10, 'csa' => (int) 7, 'camsi' => (int) 20, 'dca' => (int) 8, 'din' => (int) 12, 'dzi' => (int) 14, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 6, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 38, 'gra' => (int) 16, 'vvi' => (int) 8, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 5, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 11, 'lja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 11, 'mpo' => (int) 3, 'mbi' => (int) 14, 'mdo' => (int) 14, 'mtr' => (int) 8, 'cme' => (int) 9, 'egut' => (int) 9, 'ama' => (int) 11, 'nta' => (int) 17, 'nnu' => (int) 11, 'oeu' => (int) 18, 'osa' => (int) 8, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 6, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 9, 'rsi' => (int) 9, 'sbr' => (int) 10, 'sbo' => (int) 8, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 10, 'sas' => (int) 10, 'shi' => (int) 6, 'smo' => (int) 7, 'sly' => (int) 14, 'spe' => (int) 10, 'spa' => (int) 8, 'tar' => (int) 19, 'tha' => (int) 10, 'tca' => (int) 8, 'esa' => (int) 8, 'tpr' => (int) 11, 'twi' => (int) 13, 'ugi' => (int) 9, 'vma' => (int) 8, 'vmu' => (int) 10, 'zma' => (int) 15 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb353780' $species_info = array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ) $local_species = 'ccl' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000499', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1066', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p29780' => 'bna', 'A02p33180' => 'bna', 'A03p16470' => 'bna', 'A03p66010' => 'bna', 'A04p25970' => 'bna', 'A06p01270' => 'bna', 'A06p46080' => 'bna', 'A07p11400' => 'bna', 'A08p01840' => 'bna', 'A08p08230' => 'bna', 'A08p25740' => 'bna', 'A09p32070' => 'bna', 'A09p37830' => 'bna', 'A09p42840' => 'bna', 'A09p42850' => 'bna', 'Aa31LG10G2060' => 'aar', 'Aa31LG2G7410' => 'aar', 'Aa31LG6G10200' => 'aar', 'Aa31LG6G16680' => 'aar', 'Aa31LG6G8470' => 'aar', 'Aa31LG9G12730' => 'aar', 'Aa31LG9G13680' => 'aar', 'Aa31LG9G14920' => 'aar', 'Aa31LG9G6650' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4977' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5467' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3254' => 'aag', 'Actinidia02578' => 'ach', 'Actinidia07693' => 'ach', 'Actinidia08413' => 'ach', 'Actinidia08414' => 'ach', 'Actinidia15289' => 'ach', 'Actinidia19871' => 'ach', 'Actinidia21475' => 'ach', 'Actinidia22576' => 'ach', 'Actinidia28327' => 'ach', 'Actinidia32491' => 'ach', 'Actinidia39463' => 'ach', 'Actinidia39571' => 'ach', 'Ah.01g013750' => 'amhyb', 'Ah.01g023210' => 'amhyb', 'Ah.04g164850' => 'amhyb', 'Ah.05g178060' => 'amhyb', 'Ah.07g204270' => 'amhyb', 'Ah.07g208480' => 'amhyb', 'Ah.09g237410' => 'amhyb', 'Ah.14g089460' => 'amhyb', 'AL1G41790' => 'aly', 'AL1G49050' => 'aly', 'AL1G53810' => 'aly', 'AL1G61400' => 'aly', 'AL4G18580' => 'aly', 'AL5G12510' => 'aly', 'AL5G12540' => 'aly', 'AL6G43230' => 'aly', 'AL7G10370' => 'aly', 'AL7G19250' => 'aly', 'AL8G12240' => 'aly', 'AL8G18540' => 'aly', 'Aqoxy1G02409' => 'aox', 'Aqoxy2G03993' => 'aox', 'Aqoxy3G03357' => 'aox', 'Aqoxy4G00785' => 'aox', 'Aqoxy5G02598' => 'aox', 'Aqoxy6G00132' => 'aox', 'Aqoxy7G01776' => 'aox', 'Aqoxy7G02316' => 'aox', 'Aqoxy7G03973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.12AFKW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B8730' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27IQR1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3F75VG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3RE0GA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41TCQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.527VTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FIR39' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5W8UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DA38EV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ63HS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H1I32C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HC27T5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4M8AP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7N3CZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9UVDZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LS1NQA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT1D4B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SKC4TM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCFV76' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF9Q1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQWD9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1ZM88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WE07RT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YCK7VH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJE6Q6' => 'arhy', 'AT1G28240' => 'ath', 'AT1G34550' => 'ath', 'AT1G53040' => 'ath', 'AT2G02910' => 'ath', 'AT4G09630' => 'ath', 'AT4G38500' => 'ath', 'AT5G42660' => 'ath', 'AT5G46220' => 'ath', 'ATR0152G026' => 'atr', 'ATR0564G343' => 'atr', 'ATR0706G151' => 'atr', 'ATR0733G207' => 'atr', 'ATR0751G234' => 'atr', 'ATR0807G048' => 'atr', 'ATR1091G084' => 'atr', 'Atru.chr10.1229' => 'acertr', 'Atru.chr10.1230' => 'acertr', 'Atru.chr10.1874' => 'acertr', 'Atru.chr11.1808' => 'acertr', 'Atru.chr13.1795' => 'acertr', 'Atru.chr13.570' => 'acertr', 'Atru.chr2.2608' => 'acertr', 'Atru.chr2.2609' => 'acertr', 'Atru.chr5.3428' => 'acertr', 'Atru.chr8.1171' => 'acertr', 'AUR62004651' => 'cqu', 'AUR62008675' => 'cqu', 'AUR62010014' => 'cqu', 'AUR62013004' => 'cqu', 'AUR62014825' => 'cqu', 'AUR62015015' => 'cqu', 'AUR62015151' => 'cqu', 'AUR62017020' => 'cqu', 'AUR62019422' => 'cqu', 'AUR62023570' => 'cqu', 'AUR62025571' => 'cqu', 'AUR62029098' => 'cqu', 'AUR62033863' => 'cqu', 'AUR62034296' => 'cqu', 'AUR62040075' => 'cqu', 'BcaB02g07334' => 'bca', 'BcaB02g10575' => 'bca', 'BcaB03g12119' => 'bca', 'BcaB03g12120' => 'bca', 'BcaB03g13945' => 'bca', 'BcaB04g17123' => 'bca', 'BcaB04g17867' => 'bca', 'BcaB04g19839' => 'bca', 'BcaB07g30317' => 'bca', 'BcaB07g32432' => 'bca', 'BcaB07g33362' => 'bca', 'BcaB08g36611' => 'bca', 'BcaC01g00028' => 'bca', 'BcaC01g01356' => 'bca', 'BcaC01g02034' => 'bca', 'BcaC01g06051' => 'bca', 'BcaC03g16839' => 'bca', 'BcaC03g17176' => 'bca', 'BcaC05g26829' => 'bca', 'BcaC06g31490' => 'bca', 'BcaC06g35344' => 'bca', 'BcaC06g36570' => 'bca', 'BcaC07g37537' => 'bca', 'BcaC08g43491' => 'bca', 'BcaC08g43773' => 'bca', 'BcaNung00234' => 'bca', 'BcaNung01982' => 'bca', 'BcaNung03707' => 'bca', 'BcaNung06454' => 'bca', 'BolC2t10762H' => 'bol', 'BolC2t11191H' => 'bol', 'BolC3t14322H' => 'bol', 'BolC3t19747H' => 'bol', 'BolC3t21425H' => 'bol', 'BolC4t27800H' => 'bol', 'BolC5t31423H' => 'bol', 'BolC6t35951H' => 'bol', 'BolC6t36282H' => 'bol', 'BolC7t40678H' => 'bol', 'BolC7t40679H' => 'bol', 'BolC7t42222H' => 'bol', 'BolC7t43492H' => 'bol', 'BolC7t46785H' => 'bol', 'BolC8t47853H' => 'bol', 'BolC9t56805H' => 'bol', 'BraA02t08000Z' => 'bra', 'BraA02t08341Z' => 'bra', 'BraA03t10936Z' => 'bra', 'BraA03t15657Z' => 'bra', 'BraA04t18100Z' => 'bra', 'BraA05t20523Z' => 'bra', 'BraA06t23353Z' => 'bra', 'BraA06t27473Z' => 'bra', 'BraA06t27769Z' => 'bra', 'BraA07t28928Z' => 'bra', 'BraA08t32236Z' => 'bra', 'BraA08t32841Z' => 'bra', 'BraA08t34524Z' => 'bra', 'BraA09t38742Z' => 'bra', 'BraA09t39295Z' => 'bra', 'C02p47180' => 'bna', 'C02p50990' => 'bna', 'C03p19360' => 'bna', 'C03p74950' => 'bna', 'C03p91000' => 'bna', 'C04p63260' => 'bna', 'C05p27050' => 'bna', 'C06p08750' => 'bna', 'C06p11490' => 'bna', 'C07p02820' => 'bna', 'C07p17180' => 'bna', 'C07p29440' => 'bna', 'C07p63730' => 'bna', 'C09p39260' => 'bna', 'CAN.G1164.34' => 'can', 'CAN.G1164.39' => 'can', 'CAN.G1530.3' => 'can', 'CAN.G162.61' => 'can', 'CAN.G176.6' => 'can', 'CAN.G289.49' => 'can', 'CAN.G370.21' => 'can', 'CAN.G370.22' => 'can', 'CAN.G371.117' => 'can', 'CAN.G58.37' => 'can', 'CAN.G588.98' => 'can', 'CANSAT21G2266' => 'cansat', 'CANSAT25G2799' => 'cansat', 'CANSAT35G0862' => 'cansat', 'CANSAT35G1704' => 'cansat', 'CANSAT35G1760' => 'cansat', 'CANSAT56G3971' => 'cansat', 'CANSAT56G4116' => 'cansat', 'CANSAT80G1259' => 'cansat', 'CARHR027730' => 'chi', 'CARHR033880' => 'chi', 'CARHR043270' => 'chi', 'CARHR145330' => 'chi', 'CARHR145340' => 'chi', 'CARHR175570' => 'chi', 'CARHR181570' => 'chi', 'CARHR258470' => 'chi', 'CARHR260490' => 'chi', 'CARHR294220' => 'chi', 'Carub.0001s2668' => 'cru', 'Carub.0001s3257' => 'cru', 'Carub.0001s4220' => 'cru', 'Carub.0005s0179' => 'cru', 'Carub.0006s2807' => 'cru', 'Carub.0007s0039' => 'cru', 'Carub.0008s0169' => 'cru', 'Carub.0008s0636' => 'cru', 'Ca_00338_v3' => 'car', 'Ca_00542_v3' => 'car', 'Ca_01844_v3' => 'car', 'Ca_10611_v3' => 'car', 'Ca_13326_v3' => 'car', 'Ca_17944_v3' => 'car', 'Ca_18546_v3' => 'car', 'Ca_24219_v3' => 'car', 'Ca_29972_v3' => 'car', 'CBR_g3681' => 'cbr', 'CBR_g40021' => 'cbr', 'Cc01_g08140' => 'ccan', 'Cc02_g13410' => 'ccan', 'Cc02_g37480' => 'ccan', 'Cc05_g12030' => 'ccan', 'Cc09_g03370' => 'ccan', 'Cc09_g10300' => 'ccan', 'Cc10_g03530' => 'ccan', 'Cc10_g11380' => 'ccan', 'CDE01G0176' => 'cde', 'CDE02G0675' => 'cde', 'CDE02G0942' => 'cde', 'CDE02G1153' => 'cde', 'CDE02G4177' => 'cde', 'CDE04G2117' => 'cde', 'CDE04G2736' => 'cde', 'CDE08G1161' => 'cde', 'CDE09G1238' => 'cde', 'Cfa000467' => 'cfa', 'Cfa000947' => 'cfa', 'Cfa004969' => 'cfa', 'Cfa005284' => 'cfa', 'Cfa008993' => 'cfa', 'Cfa018187' => 'cfa', 'Cfa018454' => 'cfa', 'Cfa020585' => 'cfa', 'Ciclev10000424m.g' => 'ccl', 'Ciclev10003605m.g' => 'ccl', 'Ciclev10007828m.g' => 'ccl', 'Ciclev10014620m.g' => 'ccl', 'Ciclev10015169m.g' => 'ccl', 'Ciclev10018291m.g' => 'ccl', 'Ciclev10028256m.g' => 'ccl', 'Ciclev10033822m.g' => 'ccl', 'CiPaw.05G060300' => 'cil', 'CiPaw.05G085000' => 'cil', 'CiPaw.06G083700' => 'cil', 'CiPaw.06G120300' => 'cil', 'CiPaw.09G060500' => 'cil', 'CiPaw.09G123800' => 'cil', 'CiPaw.11G169700' => 'cil', 'CiPaw.12G118300' => 'cil', 'CiPaw.15G071000' => 'cil', 'CiPaw.15G081900' => 'cil', 'ClCG01G024610' => 'cla', 'ClCG03G006070' => 'cla', 'ClCG05G019250' => 'cla', 'ClCG09G009500' => 'cla', 'ClCG11G008200' => 'cla', 'ClCG11G018080' => 'cla', 'COL.COLO4_17373' => 'col', 'COL.COLO4_22994' => 'col', 'COL.COLO4_26389' => 'col', 'COL.COLO4_27170' => 'col', 'COL.COLO4_31074' => 'col', 'COL.COLO4_31465' => 'col', 'COL.COLO4_36438' => 'col', 'COL.COLO4_36439' => 'col', 'Cpa.g.c38781' => 'cpa', 'Cpa.g.sc128.12' => 'cpa', 'Cpa.g.sc166.7' => 'cpa', 'Cpa.g.sc166.8' => 'cpa', 'Cpa.g.sc20.111' => 'cpa', 'Cpa.g.sc27.31' => 'cpa', 'Cpa.g.sc64.36' => 'cpa', 'Cpa.g.sc64.37' => 'cpa', 'Cpa.g.sc66.49' => 'cpa', 'Cpa.g.sc80.64' => 'cpa', 'CsaV3_1G012320' => 'csa', 'CsaV3_2G008480' => 'csa', 'CsaV3_2G033450' => 'csa', 'CsaV3_3G044830' => 'csa', 'CsaV3_4G033710' => 'csa', 'CsaV3_6G051730' => 'csa', 'CsaV3_7G025350' => 'csa', 'CSS0001067' => 'camsi', 'CSS0005996' => 'camsi', 'CSS0006590' => 'camsi', 'CSS0009673' => 'camsi', 'CSS0010201' => 'camsi', 'CSS0010549' => 'camsi', 'CSS0011364' => 'camsi', 'CSS0014473' => 'camsi', 'CSS0014961' => 'camsi', 'CSS0020191' => 'camsi', 'CSS0021165' => 'camsi', 'CSS0022306' => 'camsi', 'CSS0030591' => 'camsi', 'CSS0030696' => 'camsi', 'CSS0032653' => 'camsi', 'CSS0037487' => 'camsi', 'CSS0041102' => 'camsi', 'CSS0041261' => 'camsi', 'CSS0046246' => 'camsi', 'CSS0049256' => 'camsi', 'DCAR_004075' => 'dca', 'DCAR_011538' => 'dca', 'DCAR_019553' => 'dca', 'DCAR_020952' => 'dca', 'DCAR_021739' => 'dca', 'DCAR_027407' => 'dca', 'DCAR_027913' => 'dca', 'DCAR_028066' => 'dca', 'Dinv05899' => 'din', 'Dinv07563' => 'din', 'Dinv08010' => 'din', 'Dinv14125' => 'din', 'Dinv20172' => 'din', 'Dinv30743' => 'din', 'Dinv31229' => 'din', 'Dinv34162' => 'din', 'Dinv36028' => 'din', 'Dinv39368' => 'din', 'Dinv40565' => 'din', 'Dinv41706' => 'din', 'Duzib052G0089' => 'dzi', 'Duzib116G0641' => 'dzi', 'Duzib132G0069' => 'dzi', 'Duzib132G1219' => 'dzi', 'Duzib147G0278' => 'dzi', 'Duzib160G0480' => 'dzi', 'Duzib170G0661' => 'dzi', 'Duzib177G0591' => 'dzi', 'Duzib187G1353' => 'dzi', 'Duzib192G0858' => 'dzi', 'Duzib192G0883' => 'dzi', 'Duzib213G0506' => 'dzi', 'Duzib235G0289' => 'dzi', 'Duzib251G0422' => 'dzi', 'ECA232G3898' => 'eca', 'ECA233G5950' => 'eca', 'ECA234G1699' => 'eca', 'ECA234G2421' => 'eca', 'ECA236G0426' => 'eca', 'ECA236G4331' => 'eca', 'ECA248G2573' => 'eca', 'EL10Ac1g00077' => 'bvu', 'EL10Ac1g01746' => 'bvu', 'EL10Ac2g03464' => 'bvu', 'EL10Ac4g08176' => 'bvu', 'EL10Ac7g17521' => 'bvu', 'EL10Ac8g20386' => 'bvu', 'EL10Ac9g21343' => 'bvu', 'EL10Ac9g22688' => 'bvu', 'Eucgr.B03434' => 'egr', 'Eucgr.D00618' => 'egr', 'Eucgr.E02395' => 'egr', 'Eucgr.F01129' => 'egr', 'Eucgr.F02622' => 'egr', 'Eucgr.F04207' => 'egr', 'FAN01G0570' => 'fan', 'FAN03G3351' => 'fan', 'FAN06G3702' => 'fan', 'FAN07G2149' => 'fan', 'FAN10G3758' => 'fan', 'FAN11G1170' => 'fan', 'FAN11G2050' => 'fan', 'FAN11G2724' => 'fan', 'FAN12G1700' => 'fan', 'FAN12G2028' => 'fan', 'FAN15G1160' => 'fan', 'FAN15G3063' => 'fan', 'FAN16G2540' => 'fan', 'FAN16G3077' => 'fan', 'FAN16G3624' => 'fan', 'FAN17G0221' => 'fan', 'FAN20G2492' => 'fan', 'FAN20G2905' => 'fan', 'FAN21G0548' => 'fan', 'FAN21G1300' => 'fan', 'FAN22G0077' => 'fan', 'FAN22G1315' => 'fan', 'FAN24G1280' => 'fan', 'FAN24G1445' => 'fan', 'FAN24G3527' => 'fan', 'FAN25G0464' => 'fan', 'FAN25G2885' => 'fan', 'FAN25G3270' => 'fan', 'FAN27G1101' => 'fan', 'FAN27G2846' => 'fan', 'FAN27G3524' => 'fan', 'FvH4_2g11770' => 'fve', 'FvH4_2g15630' => 'fve', 'FvH4_3g05570' => 'fve', 'FvH4_3g09110' => 'fve', 'FvH4_3g19940' => 'fve', 'FvH4_4g04821' => 'fve', 'FvH4_4g31480' => 'fve', 'FvH4_7g01740' => 'fve', 'Glyma.05G130400' => 'gma', 'Glyma.05G156400' => 'gma', 'Glyma.07G197000' => 'gma', 'Glyma.08G085151' => 'gma', 'Glyma.08G114500' => 'gma', 'Glyma.08G300400' => 'gma', 'Glyma.10G215800' => 'gma', 'Glyma.12G224400' => 'gma', 'Glyma.13G179300' => 'gma', 'Glyma.13G218151' => 'gma', 'Glyma.13G238800' => 'gma', 'Glyma.13G276900' => 'gma', 'Glyma.14G078200' => 'gma', 'Glyma.15G074500' => 'gma', 'Glyma.15G094100' => 'gma', 'Glyma.17G247200' => 'gma', 'Glyma.18G120100' => 'gma', 'Glyma.20G176000' => 'gma', 'Gohir.A01G063600' => 'ghi', 'Gohir.A01G170301' => 'ghi', 'Gohir.A02G060500' => 'ghi', 'Gohir.A05G133850' => 'ghi', 'Gohir.A05G161400' => 'ghi', 'Gohir.A06G012900' => 'ghi', 'Gohir.A06G035901' => 'ghi', 'Gohir.A06G127100' => 'ghi', 'Gohir.A06G210500' => 'ghi', 'Gohir.A08G008650' => 'ghi', 'Gohir.A09G072700' => 'ghi', 'Gohir.A09G088301' => 'ghi', 'Gohir.A10G040600' => 'ghi', 'Gohir.A12G036300' => 'ghi', 'Gohir.A12G143350' => 'ghi', 'Gohir.A12G165500' => 'ghi', 'Gohir.A13G145700' => 'ghi', 'Gohir.D01G050000' => 'ghi', 'Gohir.D01G051366' => 'ghi', 'Gohir.D01G161350' => 'ghi', 'Gohir.D02G065900' => 'ghi', 'Gohir.D05G164200' => 'ghi', 'Gohir.D05G355500' => 'ghi', 'Gohir.D06G010400' => 'ghi', 'Gohir.D06G111250' => 'ghi', 'Gohir.D06G132000' => 'ghi', 'Gohir.D06G210500' => 'ghi', 'Gohir.D07G165675' => 'ghi', 'Gohir.D08G062240' => 'ghi', 'Gohir.D08G086101' => 'ghi', 'Gohir.D08G138060' => 'ghi', 'Gohir.D09G072300' => 'ghi', 'Gohir.D10G041400' => 'ghi', 'Gohir.D11G191020' => 'ghi', 'Gohir.D11G212066' => 'ghi', 'Gohir.D12G036300' => 'ghi', 'Gohir.D12G168600' => 'ghi', 'Gohir.D13G150600' => 'ghi', 'Gorai.001G057300' => 'gra', 'Gorai.002G069900' => 'gra', 'Gorai.002G200000' => 'gra', 'Gorai.003G067600' => 'gra', 'Gorai.005G074800' => 'gra', 'Gorai.006G087300' => 'gra', 'Gorai.008G037500' => 'gra', 'Gorai.008G181400' => 'gra', 'Gorai.009G169400' => 'gra', 'Gorai.009G387900' => 'gra', 'Gorai.010G013300' => 'gra', 'Gorai.010G153800' => 'gra', 'Gorai.010G255800' => 'gra', 'Gorai.011G043700' => 'gra', 'Gorai.011G198900' => 'gra', 'Gorai.013G168400' => 'gra', 'GSVIVG01005212001' => 'vvi', 'GSVIVG01006163001' => 'vvi', 'GSVIVG01009625001' => 'vvi', 'GSVIVG01014338001' => 'vvi', 'GSVIVG01020005001' => 'vvi', 'GSVIVG01021450001' => 'vvi', 'GSVIVG01023975001' => 'vvi', 'GSVIVG01034490001' => 'vvi', 'HanXRQChr04g0112071' => 'han', 'HanXRQChr05g0131151' => 'han', 'HanXRQChr09g0262371' => 'han', 'HanXRQChr09g0268401' => 'han', 'HanXRQChr10g0279241' => 'han', 'HanXRQChr10g0297961' => 'han', 'HanXRQChr11g0326231' => 'han', 'HanXRQChr11g0328471' => 'han', 'HanXRQChr16g0507941' => 'han', 'HanXRQChr17g0560211' => 'han', 'Haze_02108' => 'cav', 'Haze_02428' => 'cav', 'Haze_05593' => 'cav', 'Haze_06448' => 'cav', 'Haze_09427' => 'cav', 'Haze_12022' => 'cav', 'Haze_17612' => 'cav', 'Haze_17928' => 'cav', 'Hma1.2p1_0032F.1_g019250' => 'hma', 'Hma1.2p1_0163F.1_g072690' => 'hma', 'Hma1.2p1_0265F.1_g106710' => 'hma', 'Hma1.2p1_0286F.1_g113970' => 'hma', 'Hma1.2p1_0363F.1_g136640' => 'hma', 'Hma1.2p1_0584F.1_g183470' => 'hma', 'Hma1.2p1_0885F.1_g232570' => 'hma', 'HPP92_006022' => 'vpl', 'HPP92_007320' => 'vpl', 'HPP92_011521' => 'vpl', 'HPP92_019387' => 'vpl', 'HPP92_024038' => 'vpl', 'Hund05891' => 'sun', 'Hund06450' => 'sun', 'Hund12053' => 'sun', 'Hund16800' => 'sun', 'Hund21222' => 'sun', 'Hund22896' => 'sun', 'Hund23746' => 'sun', 'Hund27083' => 'sun', 'Lalb_Chr02g0141831' => 'lal', 'Lalb_Chr02g0141841' => 'lal', 'Lalb_Chr05g0220411' => 'lal', 'Lalb_Chr06g0162081' => 'lal', 'Lalb_Chr09g0327651' => 'lal', 'Lalb_Chr13g0295051' => 'lal', 'Lalb_Chr15g0086801' => 'lal', 'Lalb_Chr16g0383781' => 'lal', 'Lalb_Chr16g0383791' => 'lal', 'Lalb_Chr18g0055441' => 'lal', 'Lalb_Chr18g0059611' => 'lal', 'Lalb_Chr20g0109661' => 'lal', 'Lalb_Chr20g0109831' => 'lal', 'Lalb_Chr20g0121871' => 'lal', 'Lalb_Chr22g0355361' => 'lal', 'Lalb_Chr25g0286371' => 'lal', 'Lj1A1187G43' => 'lonja', 'Lj1A1205T50' => 'lonja', 'Lj1A800G33' => 'lonja', 'Lj1C1187T7' => 'lonja', 'Lj1C843T11' => 'lonja', 'Lj1g0010940' => 'lja', 'Lj2A288T69' => 'lonja', 'Lj3g0024276' => 'lja', 'Lj4A47T76' => 'lonja', 'Lj4g0005805' => 'lja', 'Lj4g0006097' => 'lja', 'Lj4g0008528' => 'lja', 'Lj4g0024907' => 'lja', 'Lj5g0012472' => 'lja', 'Lj5g0018648' => 'lja', 'Lj6C789G1' => 'lonja', 'Lj6g0004000' => 'lja', 'Lj7A292G67' => 'lonja', 'Lj7A292T64' => 'lonja', 'Lj9A400T58' => 'lonja', 'Lsat_1_v5_gn_1_126181' => 'lsa', 'Lsat_1_v5_gn_4_123041' => 'lsa', 'Lsat_1_v5_gn_4_133620' => 'lsa', 'Lsat_1_v5_gn_4_53221' => 'lsa', 'Lsat_1_v5_gn_4_71961' => 'lsa', 'Lsat_1_v5_gn_7_105241' => 'lsa', 'Lsat_1_v5_gn_7_21361' => 'lsa', 'Lsat_1_v5_gn_7_28860' => 'lsa', 'Lsat_1_v5_gn_7_31260' => 'lsa', 'Lsat_1_v5_gn_8_52801' => 'lsa', 'Manes.02G191400' => 'mes', 'Manes.03G110100' => 'mes', 'Manes.04G071100' => 'mes', 'Manes.05G100500' => 'mes', 'Manes.05G164700' => 'mes', 'Manes.15G087000' => 'mes', 'Manes.15G121500' => 'mes', 'Manes.16G028300' => 'mes', 'Manes.17G046100' => 'mes', 'Manes.17G069800' => 'mes', 'Manes.18G100500' => 'mes', 'Mapoly0002s0109' => 'mpo', 'Mapoly0024s0007' => 'mpo', 'Mapoly0089s0032' => 'mpo', 'MBI04_g42241_MAGBIO' => 'mbi', 'MBI05_g11988_MAGBIO' => 'mbi', 'MBI05_g35452_MAGBIO' => 'mbi', 'MBI07_g30179_MAGBIO' => 'mbi', 'MBI07_g35859_MAGBIO' => 'mbi', 'MBI07_g35860_MAGBIO' => 'mbi', 'MBI07_g37166_MAGBIO' => 'mbi', 'MBI08_g18172_MAGBIO' => 'mbi', 'MBI09_g08441_MAGBIO' => 'mbi', 'MBI13_g01676_MAGBIO' => 'mbi', 'MBI14_g42955_MAGBIO' => 'mbi', 'MBI16_g13161_MAGBIO' => 'mbi', 'MBI17_g27204_MAGBIO' => 'mbi', 'MBI19_g21595_MAGBIO' => 'mbi', 'MD00G1148400' => 'mdo', 'MD02G1301200' => 'mdo', 'MD03G1227800' => 'mdo', 'MD05G1041100' => 'mdo', 'MD05G1124800' => 'mdo', 'MD05G1284000' => 'mdo', 'MD05G1338800' => 'mdo', 'MD05G1338900' => 'mdo', 'MD07G1022800' => 'mdo', 'MD10G1047500' => 'mdo', 'MD10G1127500' => 'mdo', 'MD10G1262300' => 'mdo', 'MD10G1293800' => 'mdo', 'MD16G1074300' => 'mdo', 'Medtr1g021670' => 'mtr', 'Medtr1g096320' => 'mtr', 'Medtr2g013690' => 'mtr', 'Medtr2g019450' => 'mtr', 'Medtr2g085170' => 'mtr', 'Medtr4g088785' => 'mtr', 'Medtr8g055930' => 'mtr', 'Medtr8g085850' => 'mtr', 'MELO3C002605.2' => 'cme', 'MELO3C003891.2' => 'cme', 'MELO3C004012.2' => 'cme', 'MELO3C007134.2' => 'cme', 'MELO3C008118.2' => 'cme', 'MELO3C016700.2' => 'cme', 'MELO3C024127.2' => 'cme', 'MELO3C033361.2' => 'cme', 'MELO3C033362.2' => 'cme', 'Migut.C00430' => 'egut', 'Migut.C01246' => 'egut', 'Migut.E00101' => 'egut', 'Migut.H01486' => 'egut', 'Migut.H01939' => 'egut', 'Migut.K00360' => 'egut', 'Migut.M00910' => 'egut', 'Migut.M01139' => 'egut', 'Migut.N02677' => 'egut', 'MSTRG.13252' => 'ama', 'MSTRG.14701' => 'ama', 'MSTRG.1521' => 'ama', 'MSTRG.15884' => 'ama', 'MSTRG.16242' => 'ama', 'MSTRG.22285' => 'ama', 'MSTRG.22444' => 'ama', 'MSTRG.2349' => 'ama', 'MSTRG.26308' => 'ama', 'MSTRG.28296' => 'ama', 'MSTRG.9895' => 'ama', 'Nitab4.5_0000110g0060' => 'nta', 'Nitab4.5_0000420g0130' => 'nta', 'Nitab4.5_0000422g0030' => 'nta', 'Nitab4.5_0000560g0180' => 'nta', 'Nitab4.5_0000703g0100' => 'nta', 'Nitab4.5_0000786g0200' => 'nta', 'Nitab4.5_0001336g0020' => 'nta', 'Nitab4.5_0001796g0030' => 'nta', 'Nitab4.5_0003348g0060' => 'nta', 'Nitab4.5_0003698g0040' => 'nta', 'Nitab4.5_0003942g0090' => 'nta', 'Nitab4.5_0004775g0070' => 'nta', 'Nitab4.5_0004864g0030' => 'nta', 'Nitab4.5_0005615g0020' => 'nta', 'Nitab4.5_0009288g0030' => 'nta', 'Nitab4.5_0009341g0010' => 'nta', 'Nitab4.5_0009535g0010' => 'nta', 'Nn1g03995' => 'nnu', 'Nn1g04100' => 'nnu', 'Nn1g06530' => 'nnu', 'Nn3g16404' => 'nnu', 'Nn3g17212' => 'nnu', 'Nn3g20776' => 'nnu', 'Nn3g21923' => 'nnu', 'Nn5g27737' => 'nnu', 'Nn5g29461' => 'nnu', 'Nn7g38355' => 'nnu', 'Nn8g39873' => 'nnu', 'Oeu000548.2' => 'oeu', 'Oeu004672.1' => 'oeu', 'Oeu015605.2' => 'oeu', 'Oeu016092.1' => 'oeu', 'Oeu017879.3' => 'oeu', 'Oeu024910.1' => 'oeu', 'Oeu028965.1' => 'oeu', 'Oeu031269.1' => 'oeu', 'Oeu031270.1' => 'oeu', 'Oeu032535.1' => 'oeu', 'Oeu034151.1' => 'oeu', 'Oeu034152.1' => 'oeu', 'Oeu034588.2' => 'oeu', 'Oeu050846.1' => 'oeu', 'Oeu050849.2' => 'oeu', 'Oeu051063.2' => 'oeu', 'Oeu052368.1' => 'oeu', 'Oeu052370.1' => 'oeu', 'Os01g0210400' => 'osa', 'Os01g0304300' => 'osa', 'Os01g0749100' => 'osa', 'Os02g0745800' => 'osa', 'Os03g0769050' => 'osa', 'Os05g0531500' => 'osa', 'Os06g0724300' => 'osa', 'Os11g0198100' => 'osa', 'Peaxi162Scf00069g01425' => 'pax', 'Peaxi162Scf00280g00811' => 'pax', 'Peaxi162Scf00310g00615' => 'pax', 'Peaxi162Scf00362g00542' => 'pax', 'Peaxi162Scf00461g00310' => 'pax', 'Peaxi162Scf00530g00118' => 'pax', 'Peaxi162Scf00541g00057' => 'pax', 'Peaxi162Scf00661g00017' => 'pax', 'Peaxi162Scf00926g00027' => 'pax', 'Peaxi162Scf01064g00263' => 'pax', 'Peaxi162Scf01211g00135' => 'pax', 'PGR004G2336' => 'pgr', 'PGR042G0327' => 'pgr', 'PGR042G1957' => 'pgr', 'PGR042G2003' => 'pgr', 'PGR042G3929' => 'pgr', 'PGR083G1137' => 'pgr', 'PGR083G1364' => 'pgr', 'PGSC0003DMG400003381' => 'stu', 'PGSC0003DMG400003417' => 'stu', 'PGSC0003DMG400008981' => 'stu', 'PGSC0003DMG400012417' => 'stu', 'PGSC0003DMG400012823' => 'stu', 'PGSC0003DMG400016885' => 'stu', 'PGSC0003DMG400022812' => 'stu', 'PGSC0003DMG400029726' => 'stu', 'PGSC0003DMG401009243' => 'stu', 'PGSC0003DMG401031505' => 'stu', 'PGSC0003DMG402031505' => 'stu', 'Phvul.001G017600' => 'pvu', 'Phvul.002G193500' => 'pvu', 'Phvul.002G228900' => 'pvu', 'Phvul.002G236800' => 'pvu', 'Phvul.003G049500' => 'pvu', 'Phvul.005G072000' => 'pvu', 'Phvul.006G164800' => 'pvu', 'Phvul.006G185100' => 'pvu', 'Phvul.007G090000' => 'pvu', 'Potri.001G399800' => 'ptr', 'Potri.002G149900' => 'ptr', 'Potri.004G044100' => 'ptr', 'Potri.004G177600' => 'ptr', 'Potri.009G138000' => 'ptr', 'Potri.010G094000' => 'ptr', 'Potri.011G053000' => 'ptr', 'Potri.011G119300' => 'ptr', 'Potri.013G113700' => 'ptr', 'Potri.018G107800' => 'ptr', 'Potri.019G084100' => 'ptr', 'Pp3c14_23720' => 'ppa', 'Pp3c16_6340' => 'ppa', 'Pp3c23_13420' => 'ppa', 'Pp3c24_2740' => 'ppa', 'Pp3c25_860' => 'ppa', 'Pp3c8_21750' => 'ppa', 'Prupe.1G273000' => 'ppe', 'Prupe.1G273700' => 'ppe', 'Prupe.1G274100' => 'ppe', 'Prupe.2G023300' => 'ppe', 'Prupe.4G048000' => 'ppe', 'Prupe.4G080400' => 'ppe', 'Prupe.4G181200' => 'ppe', 'Prupe.8G056900' => 'ppe', 'Prupe.8G168700' => 'ppe', 'Psat1g189080' => 'psa', 'Psat1g204760' => 'psa', 'Psat4g175560' => 'psa', 'Psat4g177720' => 'psa', 'Psat5g244240' => 'psa', 'Psat6g010720' => 'psa', 'Psat6g187200' => 'psa', 'Psat7g072040' => 'psa', 'PSO017G3501' => 'pso', 'PSO063G2148' => 'pso', 'PSO063G5608' => 'pso', 'PSO210G6392' => 'pso', 'PSO541G2319' => 'pso', 'PSO541G2836' => 'pso', 'PSO541G4012' => 'pso', 'PSO541G6253' => 'pso', 'PSO675G0580' => 'pso', 'PSO675G0856' => 'pso', 'PSO675G5635' => 'pso', 'PSO675G9157' => 'pso', 'PSO832G1660' => 'pso', 'PSO832G1969' => 'pso', 'QL02p007186' => 'qlo', 'QL02p033904' => 'qlo', 'QL03p064391' => 'qlo', 'QL05p040593' => 'qlo', 'QL05p058242' => 'qlo', 'QL08p021825' => 'qlo', 'QL11p004981' => 'qlo', 'RcHm_v2.0_Chr1g0318301' => 'rch', 'RcHm_v2.0_Chr4g0418501' => 'rch', 'RcHm_v2.0_Chr4g0439971' => 'rch', 'RcHm_v2.0_Chr5g0008541' => 'rch', 'RcHm_v2.0_Chr5g0014101' => 'rch', 'RcHm_v2.0_Chr5g0014131' => 'rch', 'RcHm_v2.0_Chr5g0033621' => 'rch', 'RcHm_v2.0_Chr6g0272041' => 'rch', 'RcHm_v2.0_Chr6g0278831' => 'rch', 'Rhsim02G0130400' => 'rsi', 'Rhsim02G0171100' => 'rsi', 'Rhsim05G0053000' => 'rsi', 'Rhsim05G0053100' => 'rsi', 'Rhsim06G0096500' => 'rsi', 'Rhsim06G0096600' => 'rsi', 'Rhsim06G0199100' => 'rsi', 'Rhsim12G0062300' => 'rsi', 'Rhsim12G0062800' => 'rsi', 'Sabra02G0118600' => 'sbr', 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'Solyc03g079860.2' => 'sly', 'Solyc04g079770.3' => 'sly', 'Solyc05g007430.4' => 'sly', 'Solyc07g063150.3' => 'sly', 'Solyc08g016620.3' => 'sly', 'Solyc09g057590.3' => 'sly', 'Solyc09g057600.1' => 'sly', 'Solyc10g009050.3' => 'sly', 'Solyc11g017420.2' => 'sly', 'Sopen01g053810' => 'spe', 'Sopen02g023040' => 'spe', 'Sopen03g002440' => 'spe', 'Sopen04g033350' => 'spe', 'Sopen05g003310' => 'spe', 'Sopen07g004050' => 'spe', 'Sopen07g031340' => 'spe', 'Sopen08g006990' => 'spe', 'Sopen10g004830' => 'spe', 'Sopen11g009370' => 'spe', 'Sp1g24450' => 'spa', 'Sp1g29670' => 'spa', 'Sp1g39600' => 'spa', 'Sp2g11080' => 'spa', 'Sp2g13970' => 'spa', 'Sp4g16130' => 'spa', 'Sp6g13080' => 'spa', 'Sp7g37270' => 'spa', 'TAR371G0065' => 'tar', 'TAR376G0340' => 'tar', 'TAR376G0435' => 'tar', 'TAR381G0002' => 'tar', 'TAR381G1236' => 'tar', 'TAR624G0055' => 'tar', 'TAR624G0324' => 'tar', 'TAR624G0696' => 'tar', 'TAR624G0906' => 'tar', 'TAR625G0107' => 'tar', 'TAR626G0015' => 'tar', 'TAR626G1356' => 'tar', 'TAR627G0888' => 'tar', 'TAR628G0399' => 'tar', 'TAR628G1327' => 'tar', 'TAR629G2831' => 'tar', 'TAR629G2874' => 'tar', 'TAR633G1432' => 'tar', 'TAR633G2771' => 'tar', 'THA.LOC104803394' => 'tha', 'THA.LOC104805153' => 'tha', 'THA.LOC104806784' => 'tha', 'THA.LOC104810473' => 'tha', 'THA.LOC104813100' => 'tha', 'THA.LOC104814215' => 'tha', 'THA.LOC104815554' => 'tha', 'THA.LOC104820544' => 'tha', 'THA.LOC104824754' => 'tha', 'THA.LOC104827717' => 'tha', 'Thecc.02G031400' => 'tca', 'Thecc.02G055900' => 'tca', 'Thecc.02G350800' => 'tca', 'Thecc.06G150900' => 'tca', 'Thecc.06G186600' => 'tca', 'Thecc.07G089600' => 'tca', 'Thecc.08G020400' => 'tca', 'Thecc.08G182100' => 'tca', 'Thhalv10000873m.g' => 'esa', 'Thhalv10004185m.g' => 'esa', 'Thhalv10006981m.g' => 'esa', 'Thhalv10007204m.g' => 'esa', 'Thhalv10011374m.g' => 'esa', 'Thhalv10013482m.g' => 'esa', 'Thhalv10017801m.g' => 'esa', 'Thhalv10024983m.g' => 'esa', 'TPR.G12072' => 'tpr', 'TPR.G15769' => 'tpr', 'TPR.G16504' => 'tpr', 'TPR.G16506' => 'tpr', 'TPR.G24345' => 'tpr', 'TPR.G26666' => 'tpr', 'TPR.G27320' => 'tpr', 'TPR.G31819' => 'tpr', 'TPR.G38879' => 'tpr', 'TPR.G39015' => 'tpr', 'TPR.G8819' => 'tpr', 'TWI09G0924' => 'twi', 'TWI12G0811' => 'twi', 'TWI12G1294' => 'twi', 'TWI31G0150' => 'twi', 'TWI36G1262' => 'twi', 'TWI38G1287' => 'twi', 'TWI38G1633' => 'twi', 'TWI38G1982' => 'twi', 'TWI39G0116' => 'twi', 'TWI60G1011' => 'twi', 'TWI63G0171' => 'twi', 'TWI73G0839' => 'twi', 'TWI79G1511' => 'twi', 'unitig_0.g915' => 'ugi', 'unitig_0.g916' => 'ugi', 'unitig_21.g20219' => 'ugi', 'unitig_21.g20416' => 'ugi', 'unitig_578.g16132' => 'ugi', 'unitig_578.g16718' => 'ugi', 'unitig_62.g23481' => 'ugi', 'unitig_744.g24535' => 'ugi', 'unitig_749.g13525' => 'ugi', 'vmacro01248' => 'vma', 'vmacro02290' => 'vma', 'vmacro10946' => 'vma', 'vmacro11865' => 'vma', 'vmacro12493' => 'vma', 'vmacro17322' => 'vma', 'vmacro21599' => 'vma', 'vmacro23041' => 'vma', 'VMungo0251G0004' => 'vmu', 'VMungo0251G2639' => 'vmu', 'VMungo0251G2967' => 'vmu', 'VMungo0540G0864' => 'vmu', 'VMungo0540G1569' => 'vmu', 'VMungo0647G0317' => 'vmu', 'VMungo0720G1373' => 'vmu', 'VMungo0720G1508' => 'vmu', 'VMungo1080G0485' => 'vmu', 'VMungo1215G3177' => 'vmu', 'Zm00001eb112600' => 'zma', 'Zm00001eb120220' => 'zma', 'Zm00001eb153240' => 'zma', 'Zm00001eb168880' => 'zma', 'Zm00001eb213920' => 'zma', 'Zm00001eb228280' => 'zma', 'Zm00001eb254580' => 'zma', 'Zm00001eb272180' => 'zma', 'Zm00001eb293190' => 'zma', 'Zm00001eb322930' => 'zma', 'Zm00001eb353360' => 'zma', 'Zm00001eb353390' => 'zma', 'Zm00001eb353430' => 'zma', 'Zm00001eb353440' => 'zma', 'Zm00001eb353780' => 'zma' ), 'gf_id' => 'HOM05D000499', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000499' ), 'data_identifier' => 'HOM05D000499', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000499', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1066', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p29780' => 'bna', 'A02p33180' => 'bna', 'A03p16470' => 'bna', 'A03p66010' => 'bna', 'A04p25970' => 'bna', 'A06p01270' => 'bna', 'A06p46080' => 'bna', 'A07p11400' => 'bna', 'A08p01840' => 'bna', 'A08p08230' => 'bna', 'A08p25740' => 'bna', 'A09p32070' => 'bna', 'A09p37830' => 'bna', 'A09p42840' => 'bna', 'A09p42850' => 'bna', 'Aa31LG10G2060' => 'aar', 'Aa31LG2G7410' => 'aar', 'Aa31LG6G10200' => 'aar', 'Aa31LG6G16680' => 'aar', 'Aa31LG6G8470' => 'aar', 'Aa31LG9G12730' => 'aar', 'Aa31LG9G13680' => 'aar', 'Aa31LG9G14920' => 'aar', 'Aa31LG9G6650' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4977' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5467' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3254' => 'aag', 'Actinidia02578' => 'ach', 'Actinidia07693' => 'ach', 'Actinidia08413' => 'ach', 'Actinidia08414' => 'ach', 'Actinidia15289' => 'ach', 'Actinidia19871' => 'ach', 'Actinidia21475' => 'ach', 'Actinidia22576' => 'ach', 'Actinidia28327' => 'ach', 'Actinidia32491' => 'ach', 'Actinidia39463' => 'ach', 'Actinidia39571' => 'ach', 'Ah.01g013750' => 'amhyb', 'Ah.01g023210' => 'amhyb', 'Ah.04g164850' => 'amhyb', 'Ah.05g178060' => 'amhyb', 'Ah.07g204270' => 'amhyb', 'Ah.07g208480' => 'amhyb', 'Ah.09g237410' => 'amhyb', 'Ah.14g089460' => 'amhyb', 'AL1G41790' => 'aly', 'AL1G49050' => 'aly', 'AL1G53810' => 'aly', 'AL1G61400' => 'aly', 'AL4G18580' => 'aly', 'AL5G12510' => 'aly', 'AL5G12540' => 'aly', 'AL6G43230' => 'aly', 'AL7G10370' => 'aly', 'AL7G19250' => 'aly', 'AL8G12240' => 'aly', 'AL8G18540' => 'aly', 'Aqoxy1G02409' => 'aox', 'Aqoxy2G03993' => 'aox', 'Aqoxy3G03357' => 'aox', 'Aqoxy4G00785' => 'aox', 'Aqoxy5G02598' => 'aox', 'Aqoxy6G00132' => 'aox', 'Aqoxy7G01776' => 'aox', 'Aqoxy7G02316' => 'aox', 'Aqoxy7G03973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.12AFKW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B8730' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27IQR1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3F75VG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3RE0GA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41TCQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.527VTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FIR39' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5W8UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DA38EV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ63HS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H1I32C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HC27T5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4M8AP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7N3CZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9UVDZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LS1NQA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT1D4B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SKC4TM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCFV76' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF9Q1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQWD9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1ZM88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WE07RT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YCK7VH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJE6Q6' => 'arhy', 'AT1G28240' => 'ath', 'AT1G34550' => 'ath', 'AT1G53040' => 'ath', 'AT2G02910' => 'ath', 'AT4G09630' => 'ath', 'AT4G38500' => 'ath', 'AT5G42660' => 'ath', 'AT5G46220' => 'ath', 'ATR0152G026' => 'atr', 'ATR0564G343' => 'atr', 'ATR0706G151' => 'atr', 'ATR0733G207' => 'atr', 'ATR0751G234' => 'atr', 'ATR0807G048' => 'atr', 'ATR1091G084' => 'atr', 'Atru.chr10.1229' => 'acertr', 'Atru.chr10.1230' => 'acertr', 'Atru.chr10.1874' => 'acertr', 'Atru.chr11.1808' => 'acertr', 'Atru.chr13.1795' => 'acertr', 'Atru.chr13.570' => 'acertr', 'Atru.chr2.2608' => 'acertr', 'Atru.chr2.2609' => 'acertr', 'Atru.chr5.3428' => 'acertr', 'Atru.chr8.1171' => 'acertr', 'AUR62004651' => 'cqu', 'AUR62008675' => 'cqu', 'AUR62010014' => 'cqu', 'AUR62013004' => 'cqu', 'AUR62014825' => 'cqu', 'AUR62015015' => 'cqu', 'AUR62015151' => 'cqu', 'AUR62017020' => 'cqu', 'AUR62019422' => 'cqu', 'AUR62023570' => 'cqu', 'AUR62025571' => 'cqu', 'AUR62029098' => 'cqu', 'AUR62033863' => 'cqu', 'AUR62034296' => 'cqu', 'AUR62040075' => 'cqu', 'BcaB02g07334' => 'bca', 'BcaB02g10575' => 'bca', 'BcaB03g12119' => 'bca', 'BcaB03g12120' => 'bca', 'BcaB03g13945' => 'bca', 'BcaB04g17123' => 'bca', 'BcaB04g17867' => 'bca', 'BcaB04g19839' => 'bca', 'BcaB07g30317' => 'bca', 'BcaB07g32432' => 'bca', 'BcaB07g33362' => 'bca', 'BcaB08g36611' => 'bca', 'BcaC01g00028' => 'bca', 'BcaC01g01356' => 'bca', 'BcaC01g02034' => 'bca', 'BcaC01g06051' => 'bca', 'BcaC03g16839' => 'bca', 'BcaC03g17176' => 'bca', 'BcaC05g26829' => 'bca', 'BcaC06g31490' => 'bca', 'BcaC06g35344' => 'bca', 'BcaC06g36570' => 'bca', 'BcaC07g37537' => 'bca', 'BcaC08g43491' => 'bca', 'BcaC08g43773' => 'bca', 'BcaNung00234' => 'bca', 'BcaNung01982' => 'bca', 'BcaNung03707' => 'bca', 'BcaNung06454' => 'bca', 'BolC2t10762H' => 'bol', 'BolC2t11191H' => 'bol', 'BolC3t14322H' => 'bol', 'BolC3t19747H' => 'bol', 'BolC3t21425H' => 'bol', 'BolC4t27800H' => 'bol', 'BolC5t31423H' => 'bol', 'BolC6t35951H' => 'bol', 'BolC6t36282H' => 'bol', 'BolC7t40678H' => 'bol', 'BolC7t40679H' => 'bol', 'BolC7t42222H' => 'bol', 'BolC7t43492H' => 'bol', 'BolC7t46785H' => 'bol', 'BolC8t47853H' => 'bol', 'BolC9t56805H' => 'bol', 'BraA02t08000Z' => 'bra', 'BraA02t08341Z' => 'bra', 'BraA03t10936Z' => 'bra', 'BraA03t15657Z' => 'bra', 'BraA04t18100Z' => 'bra', 'BraA05t20523Z' => 'bra', 'BraA06t23353Z' => 'bra', 'BraA06t27473Z' => 'bra', 'BraA06t27769Z' => 'bra', 'BraA07t28928Z' => 'bra', 'BraA08t32236Z' => 'bra', 'BraA08t32841Z' => 'bra', 'BraA08t34524Z' => 'bra', 'BraA09t38742Z' => 'bra', 'BraA09t39295Z' => 'bra', 'C02p47180' => 'bna', 'C02p50990' => 'bna', 'C03p19360' => 'bna', 'C03p74950' => 'bna', 'C03p91000' => 'bna', 'C04p63260' => 'bna', 'C05p27050' => 'bna', 'C06p08750' => 'bna', 'C06p11490' => 'bna', 'C07p02820' => 'bna', 'C07p17180' => 'bna', 'C07p29440' => 'bna', 'C07p63730' => 'bna', 'C09p39260' => 'bna', 'CAN.G1164.34' => 'can', 'CAN.G1164.39' => 'can', 'CAN.G1530.3' => 'can', 'CAN.G162.61' => 'can', 'CAN.G176.6' => 'can', 'CAN.G289.49' => 'can', 'CAN.G370.21' => 'can', 'CAN.G370.22' => 'can', 'CAN.G371.117' => 'can', 'CAN.G58.37' => 'can', 'CAN.G588.98' => 'can', 'CANSAT21G2266' => 'cansat', 'CANSAT25G2799' => 'cansat', 'CANSAT35G0862' => 'cansat', 'CANSAT35G1704' => 'cansat', 'CANSAT35G1760' => 'cansat', 'CANSAT56G3971' => 'cansat', 'CANSAT56G4116' => 'cansat', 'CANSAT80G1259' => 'cansat', 'CARHR027730' => 'chi', 'CARHR033880' => 'chi', 'CARHR043270' => 'chi', 'CARHR145330' => 'chi', 'CARHR145340' => 'chi', 'CARHR175570' => 'chi', 'CARHR181570' => 'chi', 'CARHR258470' => 'chi', 'CARHR260490' => 'chi', 'CARHR294220' => 'chi', 'Carub.0001s2668' => 'cru', 'Carub.0001s3257' => 'cru', 'Carub.0001s4220' => 'cru', 'Carub.0005s0179' => 'cru', 'Carub.0006s2807' => 'cru', 'Carub.0007s0039' => 'cru', 'Carub.0008s0169' => 'cru', 'Carub.0008s0636' => 'cru', 'Ca_00338_v3' => 'car', 'Ca_00542_v3' => 'car', 'Ca_01844_v3' => 'car', 'Ca_10611_v3' => 'car', 'Ca_13326_v3' => 'car', 'Ca_17944_v3' => 'car', 'Ca_18546_v3' => 'car', 'Ca_24219_v3' => 'car', 'Ca_29972_v3' => 'car', 'CBR_g3681' => 'cbr', 'CBR_g40021' => 'cbr', 'Cc01_g08140' => 'ccan', 'Cc02_g13410' => 'ccan', 'Cc02_g37480' => 'ccan', 'Cc05_g12030' => 'ccan', 'Cc09_g03370' => 'ccan', 'Cc09_g10300' => 'ccan', 'Cc10_g03530' => 'ccan', 'Cc10_g11380' => 'ccan', 'CDE01G0176' => 'cde', 'CDE02G0675' => 'cde', 'CDE02G0942' => 'cde', 'CDE02G1153' => 'cde', 'CDE02G4177' => 'cde', 'CDE04G2117' => 'cde', 'CDE04G2736' => 'cde', 'CDE08G1161' => 'cde', 'CDE09G1238' => 'cde', 'Cfa000467' => 'cfa', 'Cfa000947' => 'cfa', 'Cfa004969' => 'cfa', 'Cfa005284' => 'cfa', 'Cfa008993' => 'cfa', 'Cfa018187' => 'cfa', 'Cfa018454' => 'cfa', 'Cfa020585' => 'cfa', 'Ciclev10000424m.g' => 'ccl', 'Ciclev10003605m.g' => 'ccl', 'Ciclev10007828m.g' => 'ccl', 'Ciclev10014620m.g' => 'ccl', 'Ciclev10015169m.g' => 'ccl', 'Ciclev10018291m.g' => 'ccl', 'Ciclev10028256m.g' => 'ccl', 'Ciclev10033822m.g' => 'ccl', 'CiPaw.05G060300' => 'cil', 'CiPaw.05G085000' => 'cil', 'CiPaw.06G083700' => 'cil', 'CiPaw.06G120300' => 'cil', 'CiPaw.09G060500' => 'cil', 'CiPaw.09G123800' => 'cil', 'CiPaw.11G169700' => 'cil', 'CiPaw.12G118300' => 'cil', 'CiPaw.15G071000' => 'cil', 'CiPaw.15G081900' => 'cil', 'ClCG01G024610' => 'cla', 'ClCG03G006070' => 'cla', 'ClCG05G019250' => 'cla', 'ClCG09G009500' => 'cla', 'ClCG11G008200' => 'cla', 'ClCG11G018080' => 'cla', 'COL.COLO4_17373' => 'col', 'COL.COLO4_22994' => 'col', 'COL.COLO4_26389' => 'col', 'COL.COLO4_27170' => 'col', 'COL.COLO4_31074' => 'col', 'COL.COLO4_31465' => 'col', 'COL.COLO4_36438' => 'col', 'COL.COLO4_36439' => 'col', 'Cpa.g.c38781' => 'cpa', 'Cpa.g.sc128.12' => 'cpa', 'Cpa.g.sc166.7' => 'cpa', 'Cpa.g.sc166.8' => 'cpa', 'Cpa.g.sc20.111' => 'cpa', 'Cpa.g.sc27.31' => 'cpa', 'Cpa.g.sc64.36' => 'cpa', 'Cpa.g.sc64.37' => 'cpa', 'Cpa.g.sc66.49' => 'cpa', 'Cpa.g.sc80.64' => 'cpa', 'CsaV3_1G012320' => 'csa', 'CsaV3_2G008480' => 'csa', 'CsaV3_2G033450' => 'csa', 'CsaV3_3G044830' => 'csa', 'CsaV3_4G033710' => 'csa', 'CsaV3_6G051730' => 'csa', 'CsaV3_7G025350' => 'csa', 'CSS0001067' => 'camsi', 'CSS0005996' => 'camsi', 'CSS0006590' => 'camsi', 'CSS0009673' => 'camsi', 'CSS0010201' => 'camsi', 'CSS0010549' => 'camsi', 'CSS0011364' => 'camsi', 'CSS0014473' => 'camsi', 'CSS0014961' => 'camsi', 'CSS0020191' => 'camsi', 'CSS0021165' => 'camsi', 'CSS0022306' => 'camsi', 'CSS0030591' => 'camsi', 'CSS0030696' => 'camsi', 'CSS0032653' => 'camsi', 'CSS0037487' => 'camsi', 'CSS0041102' => 'camsi', 'CSS0041261' => 'camsi', 'CSS0046246' => 'camsi', 'CSS0049256' => 'camsi', 'DCAR_004075' => 'dca', 'DCAR_011538' => 'dca', 'DCAR_019553' => 'dca', 'DCAR_020952' => 'dca', 'DCAR_021739' => 'dca', 'DCAR_027407' => 'dca', 'DCAR_027913' => 'dca', 'DCAR_028066' => 'dca', 'Dinv05899' => 'din', 'Dinv07563' => 'din', 'Dinv08010' => 'din', 'Dinv14125' => 'din', 'Dinv20172' => 'din', 'Dinv30743' => 'din', 'Dinv31229' => 'din', 'Dinv34162' => 'din', 'Dinv36028' => 'din', 'Dinv39368' => 'din', 'Dinv40565' => 'din', 'Dinv41706' => 'din', 'Duzib052G0089' => 'dzi', 'Duzib116G0641' => 'dzi', 'Duzib132G0069' => 'dzi', 'Duzib132G1219' => 'dzi', 'Duzib147G0278' => 'dzi', 'Duzib160G0480' => 'dzi', 'Duzib170G0661' => 'dzi', 'Duzib177G0591' => 'dzi', 'Duzib187G1353' => 'dzi', 'Duzib192G0858' => 'dzi', 'Duzib192G0883' => 'dzi', 'Duzib213G0506' => 'dzi', 'Duzib235G0289' => 'dzi', 'Duzib251G0422' => 'dzi', 'ECA232G3898' => 'eca', 'ECA233G5950' => 'eca', 'ECA234G1699' => 'eca', 'ECA234G2421' => 'eca', 'ECA236G0426' => 'eca', 'ECA236G4331' => 'eca', 'ECA248G2573' => 'eca', 'EL10Ac1g00077' => 'bvu', 'EL10Ac1g01746' => 'bvu', 'EL10Ac2g03464' => 'bvu', 'EL10Ac4g08176' => 'bvu', 'EL10Ac7g17521' => 'bvu', 'EL10Ac8g20386' => 'bvu', 'EL10Ac9g21343' => 'bvu', 'EL10Ac9g22688' => 'bvu', 'Eucgr.B03434' => 'egr', 'Eucgr.D00618' => 'egr', 'Eucgr.E02395' => 'egr', 'Eucgr.F01129' => 'egr', 'Eucgr.F02622' => 'egr', 'Eucgr.F04207' => 'egr', 'FAN01G0570' => 'fan', 'FAN03G3351' => 'fan', 'FAN06G3702' => 'fan', 'FAN07G2149' => 'fan', 'FAN10G3758' => 'fan', 'FAN11G1170' => 'fan', 'FAN11G2050' => 'fan', 'FAN11G2724' => 'fan', 'FAN12G1700' => 'fan', 'FAN12G2028' => 'fan', 'FAN15G1160' => 'fan', 'FAN15G3063' => 'fan', 'FAN16G2540' => 'fan', 'FAN16G3077' => 'fan', 'FAN16G3624' => 'fan', 'FAN17G0221' => 'fan', 'FAN20G2492' => 'fan', 'FAN20G2905' => 'fan', 'FAN21G0548' => 'fan', 'FAN21G1300' => 'fan', 'FAN22G0077' => 'fan', 'FAN22G1315' => 'fan', 'FAN24G1280' => 'fan', 'FAN24G1445' => 'fan', 'FAN24G3527' => 'fan', 'FAN25G0464' => 'fan', 'FAN25G2885' => 'fan', 'FAN25G3270' => 'fan', 'FAN27G1101' => 'fan', 'FAN27G2846' => 'fan', 'FAN27G3524' => 'fan', 'FvH4_2g11770' => 'fve', 'FvH4_2g15630' => 'fve', 'FvH4_3g05570' => 'fve', 'FvH4_3g09110' => 'fve', 'FvH4_3g19940' => 'fve', 'FvH4_4g04821' => 'fve', 'FvH4_4g31480' => 'fve', 'FvH4_7g01740' => 'fve', 'Glyma.05G130400' => 'gma', 'Glyma.05G156400' => 'gma', 'Glyma.07G197000' => 'gma', 'Glyma.08G085151' => 'gma', 'Glyma.08G114500' => 'gma', 'Glyma.08G300400' => 'gma', 'Glyma.10G215800' => 'gma', 'Glyma.12G224400' => 'gma', 'Glyma.13G179300' => 'gma', 'Glyma.13G218151' => 'gma', 'Glyma.13G238800' => 'gma', 'Glyma.13G276900' => 'gma', 'Glyma.14G078200' => 'gma', 'Glyma.15G074500' => 'gma', 'Glyma.15G094100' => 'gma', 'Glyma.17G247200' => 'gma', 'Glyma.18G120100' => 'gma', 'Glyma.20G176000' => 'gma', 'Gohir.A01G063600' => 'ghi', 'Gohir.A01G170301' => 'ghi', 'Gohir.A02G060500' => 'ghi', 'Gohir.A05G133850' => 'ghi', 'Gohir.A05G161400' => 'ghi', 'Gohir.A06G012900' => 'ghi', 'Gohir.A06G035901' => 'ghi', 'Gohir.A06G127100' => 'ghi', 'Gohir.A06G210500' => 'ghi', 'Gohir.A08G008650' => 'ghi', 'Gohir.A09G072700' => 'ghi', 'Gohir.A09G088301' => 'ghi', 'Gohir.A10G040600' => 'ghi', 'Gohir.A12G036300' => 'ghi', 'Gohir.A12G143350' => 'ghi', 'Gohir.A12G165500' => 'ghi', 'Gohir.A13G145700' => 'ghi', 'Gohir.D01G050000' => 'ghi', 'Gohir.D01G051366' => 'ghi', 'Gohir.D01G161350' => 'ghi', 'Gohir.D02G065900' => 'ghi', 'Gohir.D05G164200' => 'ghi', 'Gohir.D05G355500' => 'ghi', 'Gohir.D06G010400' => 'ghi', 'Gohir.D06G111250' => 'ghi', 'Gohir.D06G132000' => 'ghi', 'Gohir.D06G210500' => 'ghi', 'Gohir.D07G165675' => 'ghi', 'Gohir.D08G062240' => 'ghi', 'Gohir.D08G086101' => 'ghi', 'Gohir.D08G138060' => 'ghi', 'Gohir.D09G072300' => 'ghi', 'Gohir.D10G041400' => 'ghi', 'Gohir.D11G191020' => 'ghi', 'Gohir.D11G212066' => 'ghi', 'Gohir.D12G036300' => 'ghi', 'Gohir.D12G168600' => 'ghi', 'Gohir.D13G150600' => 'ghi', 'Gorai.001G057300' => 'gra', 'Gorai.002G069900' => 'gra', 'Gorai.002G200000' => 'gra', 'Gorai.003G067600' => 'gra', 'Gorai.005G074800' => 'gra', 'Gorai.006G087300' => 'gra', 'Gorai.008G037500' => 'gra', 'Gorai.008G181400' => 'gra', 'Gorai.009G169400' => 'gra', 'Gorai.009G387900' => 'gra', 'Gorai.010G013300' => 'gra', 'Gorai.010G153800' => 'gra', 'Gorai.010G255800' => 'gra', 'Gorai.011G043700' => 'gra', 'Gorai.011G198900' => 'gra', 'Gorai.013G168400' => 'gra', 'GSVIVG01005212001' => 'vvi', 'GSVIVG01006163001' => 'vvi', 'GSVIVG01009625001' => 'vvi', 'GSVIVG01014338001' => 'vvi', 'GSVIVG01020005001' => 'vvi', 'GSVIVG01021450001' => 'vvi', 'GSVIVG01023975001' => 'vvi', 'GSVIVG01034490001' => 'vvi', 'HanXRQChr04g0112071' => 'han', 'HanXRQChr05g0131151' => 'han', 'HanXRQChr09g0262371' => 'han', 'HanXRQChr09g0268401' => 'han', 'HanXRQChr10g0279241' => 'han', 'HanXRQChr10g0297961' => 'han', 'HanXRQChr11g0326231' => 'han', 'HanXRQChr11g0328471' => 'han', 'HanXRQChr16g0507941' => 'han', 'HanXRQChr17g0560211' => 'han', 'Haze_02108' => 'cav', 'Haze_02428' => 'cav', 'Haze_05593' => 'cav', 'Haze_06448' => 'cav', 'Haze_09427' => 'cav', 'Haze_12022' => 'cav', 'Haze_17612' => 'cav', 'Haze_17928' => 'cav', 'Hma1.2p1_0032F.1_g019250' => 'hma', 'Hma1.2p1_0163F.1_g072690' => 'hma', 'Hma1.2p1_0265F.1_g106710' => 'hma', 'Hma1.2p1_0286F.1_g113970' => 'hma', 'Hma1.2p1_0363F.1_g136640' => 'hma', 'Hma1.2p1_0584F.1_g183470' => 'hma', 'Hma1.2p1_0885F.1_g232570' => 'hma', 'HPP92_006022' => 'vpl', 'HPP92_007320' => 'vpl', 'HPP92_011521' => 'vpl', 'HPP92_019387' => 'vpl', 'HPP92_024038' => 'vpl', 'Hund05891' => 'sun', 'Hund06450' => 'sun', 'Hund12053' => 'sun', 'Hund16800' => 'sun', 'Hund21222' => 'sun', 'Hund22896' => 'sun', 'Hund23746' => 'sun', 'Hund27083' => 'sun', 'Lalb_Chr02g0141831' => 'lal', 'Lalb_Chr02g0141841' => 'lal', 'Lalb_Chr05g0220411' => 'lal', 'Lalb_Chr06g0162081' => 'lal', 'Lalb_Chr09g0327651' => 'lal', 'Lalb_Chr13g0295051' => 'lal', 'Lalb_Chr15g0086801' => 'lal', 'Lalb_Chr16g0383781' => 'lal', 'Lalb_Chr16g0383791' => 'lal', 'Lalb_Chr18g0055441' => 'lal', 'Lalb_Chr18g0059611' => 'lal', 'Lalb_Chr20g0109661' => 'lal', 'Lalb_Chr20g0109831' => 'lal', 'Lalb_Chr20g0121871' => 'lal', 'Lalb_Chr22g0355361' => 'lal', 'Lalb_Chr25g0286371' => 'lal', 'Lj1A1187G43' => 'lonja', 'Lj1A1205T50' => 'lonja', 'Lj1A800G33' => 'lonja', 'Lj1C1187T7' => 'lonja', 'Lj1C843T11' => 'lonja', 'Lj1g0010940' => 'lja', 'Lj2A288T69' => 'lonja', 'Lj3g0024276' => 'lja', 'Lj4A47T76' => 'lonja', 'Lj4g0005805' => 'lja', 'Lj4g0006097' => 'lja', 'Lj4g0008528' => 'lja', 'Lj4g0024907' => 'lja', 'Lj5g0012472' => 'lja', 'Lj5g0018648' => 'lja', 'Lj6C789G1' => 'lonja', 'Lj6g0004000' => 'lja', 'Lj7A292G67' => 'lonja', 'Lj7A292T64' => 'lonja', 'Lj9A400T58' => 'lonja', 'Lsat_1_v5_gn_1_126181' => 'lsa', 'Lsat_1_v5_gn_4_123041' => 'lsa', 'Lsat_1_v5_gn_4_133620' => 'lsa', 'Lsat_1_v5_gn_4_53221' => 'lsa', 'Lsat_1_v5_gn_4_71961' => 'lsa', 'Lsat_1_v5_gn_7_105241' => 'lsa', 'Lsat_1_v5_gn_7_21361' => 'lsa', 'Lsat_1_v5_gn_7_28860' => 'lsa', 'Lsat_1_v5_gn_7_31260' => 'lsa', 'Lsat_1_v5_gn_8_52801' => 'lsa', 'Manes.02G191400' => 'mes', 'Manes.03G110100' => 'mes', 'Manes.04G071100' => 'mes', 'Manes.05G100500' => 'mes', 'Manes.05G164700' => 'mes', 'Manes.15G087000' => 'mes', 'Manes.15G121500' => 'mes', 'Manes.16G028300' => 'mes', 'Manes.17G046100' => 'mes', 'Manes.17G069800' => 'mes', 'Manes.18G100500' => 'mes', 'Mapoly0002s0109' => 'mpo', 'Mapoly0024s0007' => 'mpo', 'Mapoly0089s0032' => 'mpo', 'MBI04_g42241_MAGBIO' => 'mbi', 'MBI05_g11988_MAGBIO' => 'mbi', 'MBI05_g35452_MAGBIO' => 'mbi', 'MBI07_g30179_MAGBIO' => 'mbi', 'MBI07_g35859_MAGBIO' => 'mbi', 'MBI07_g35860_MAGBIO' => 'mbi', 'MBI07_g37166_MAGBIO' => 'mbi', 'MBI08_g18172_MAGBIO' => 'mbi', 'MBI09_g08441_MAGBIO' => 'mbi', 'MBI13_g01676_MAGBIO' => 'mbi', 'MBI14_g42955_MAGBIO' => 'mbi', 'MBI16_g13161_MAGBIO' => 'mbi', 'MBI17_g27204_MAGBIO' => 'mbi', 'MBI19_g21595_MAGBIO' => 'mbi', 'MD00G1148400' => 'mdo', 'MD02G1301200' => 'mdo', 'MD03G1227800' => 'mdo', 'MD05G1041100' => 'mdo', 'MD05G1124800' => 'mdo', 'MD05G1284000' => 'mdo', 'MD05G1338800' => 'mdo', 'MD05G1338900' => 'mdo', 'MD07G1022800' => 'mdo', 'MD10G1047500' => 'mdo', 'MD10G1127500' => 'mdo', 'MD10G1262300' => 'mdo', 'MD10G1293800' => 'mdo', 'MD16G1074300' => 'mdo', 'Medtr1g021670' => 'mtr', 'Medtr1g096320' => 'mtr', 'Medtr2g013690' => 'mtr', 'Medtr2g019450' => 'mtr', 'Medtr2g085170' => 'mtr', 'Medtr4g088785' => 'mtr', 'Medtr8g055930' => 'mtr', 'Medtr8g085850' => 'mtr', 'MELO3C002605.2' => 'cme', 'MELO3C003891.2' => 'cme', 'MELO3C004012.2' => 'cme', 'MELO3C007134.2' => 'cme', 'MELO3C008118.2' => 'cme', 'MELO3C016700.2' => 'cme', 'MELO3C024127.2' => 'cme', 'MELO3C033361.2' => 'cme', 'MELO3C033362.2' => 'cme', 'Migut.C00430' => 'egut', 'Migut.C01246' => 'egut', 'Migut.E00101' => 'egut', 'Migut.H01486' => 'egut', 'Migut.H01939' => 'egut', 'Migut.K00360' => 'egut', 'Migut.M00910' => 'egut', 'Migut.M01139' => 'egut', 'Migut.N02677' => 'egut', 'MSTRG.13252' => 'ama', 'MSTRG.14701' => 'ama', 'MSTRG.1521' => 'ama', 'MSTRG.15884' => 'ama', 'MSTRG.16242' => 'ama', 'MSTRG.22285' => 'ama', 'MSTRG.22444' => 'ama', 'MSTRG.2349' => 'ama', 'MSTRG.26308' => 'ama', 'MSTRG.28296' => 'ama', 'MSTRG.9895' => 'ama', 'Nitab4.5_0000110g0060' => 'nta', 'Nitab4.5_0000420g0130' => 'nta', 'Nitab4.5_0000422g0030' => 'nta', 'Nitab4.5_0000560g0180' => 'nta', 'Nitab4.5_0000703g0100' => 'nta', 'Nitab4.5_0000786g0200' => 'nta', 'Nitab4.5_0001336g0020' => 'nta', 'Nitab4.5_0001796g0030' => 'nta', 'Nitab4.5_0003348g0060' => 'nta', 'Nitab4.5_0003698g0040' => 'nta', 'Nitab4.5_0003942g0090' => 'nta', 'Nitab4.5_0004775g0070' => 'nta', 'Nitab4.5_0004864g0030' => 'nta', 'Nitab4.5_0005615g0020' => 'nta', 'Nitab4.5_0009288g0030' => 'nta', 'Nitab4.5_0009341g0010' => 'nta', 'Nitab4.5_0009535g0010' => 'nta', 'Nn1g03995' => 'nnu', 'Nn1g04100' => 'nnu', 'Nn1g06530' => 'nnu', 'Nn3g16404' => 'nnu', 'Nn3g17212' => 'nnu', 'Nn3g20776' => 'nnu', 'Nn3g21923' => 'nnu', 'Nn5g27737' => 'nnu', 'Nn5g29461' => 'nnu', 'Nn7g38355' => 'nnu', 'Nn8g39873' => 'nnu', 'Oeu000548.2' => 'oeu', 'Oeu004672.1' => 'oeu', 'Oeu015605.2' => 'oeu', 'Oeu016092.1' => 'oeu', 'Oeu017879.3' => 'oeu', 'Oeu024910.1' => 'oeu', 'Oeu028965.1' => 'oeu', 'Oeu031269.1' => 'oeu', 'Oeu031270.1' => 'oeu', 'Oeu032535.1' => 'oeu', 'Oeu034151.1' => 'oeu', 'Oeu034152.1' => 'oeu', 'Oeu034588.2' => 'oeu', 'Oeu050846.1' => 'oeu', 'Oeu050849.2' => 'oeu', 'Oeu051063.2' => 'oeu', 'Oeu052368.1' => 'oeu', 'Oeu052370.1' => 'oeu', 'Os01g0210400' => 'osa', 'Os01g0304300' => 'osa', 'Os01g0749100' => 'osa', 'Os02g0745800' => 'osa', 'Os03g0769050' => 'osa', 'Os05g0531500' => 'osa', 'Os06g0724300' => 'osa', 'Os11g0198100' => 'osa', 'Peaxi162Scf00069g01425' => 'pax', 'Peaxi162Scf00280g00811' => 'pax', 'Peaxi162Scf00310g00615' => 'pax', 'Peaxi162Scf00362g00542' => 'pax', 'Peaxi162Scf00461g00310' => 'pax', 'Peaxi162Scf00530g00118' => 'pax', 'Peaxi162Scf00541g00057' => 'pax', 'Peaxi162Scf00661g00017' => 'pax', 'Peaxi162Scf00926g00027' => 'pax', 'Peaxi162Scf01064g00263' => 'pax', 'Peaxi162Scf01211g00135' => 'pax', 'PGR004G2336' => 'pgr', 'PGR042G0327' => 'pgr', 'PGR042G1957' => 'pgr', 'PGR042G2003' => 'pgr', 'PGR042G3929' => 'pgr', 'PGR083G1137' => 'pgr', 'PGR083G1364' => 'pgr', 'PGSC0003DMG400003381' => 'stu', 'PGSC0003DMG400003417' => 'stu', 'PGSC0003DMG400008981' => 'stu', 'PGSC0003DMG400012417' => 'stu', 'PGSC0003DMG400012823' => 'stu', 'PGSC0003DMG400016885' => 'stu', 'PGSC0003DMG400022812' => 'stu', 'PGSC0003DMG400029726' => 'stu', 'PGSC0003DMG401009243' => 'stu', 'PGSC0003DMG401031505' => 'stu', 'PGSC0003DMG402031505' => 'stu', 'Phvul.001G017600' => 'pvu', 'Phvul.002G193500' => 'pvu', 'Phvul.002G228900' => 'pvu', 'Phvul.002G236800' => 'pvu', 'Phvul.003G049500' => 'pvu', 'Phvul.005G072000' => 'pvu', 'Phvul.006G164800' => 'pvu', 'Phvul.006G185100' => 'pvu', 'Phvul.007G090000' => 'pvu', 'Potri.001G399800' => 'ptr', 'Potri.002G149900' => 'ptr', 'Potri.004G044100' => 'ptr', 'Potri.004G177600' => 'ptr', 'Potri.009G138000' => 'ptr', 'Potri.010G094000' => 'ptr', 'Potri.011G053000' => 'ptr', 'Potri.011G119300' => 'ptr', 'Potri.013G113700' => 'ptr', 'Potri.018G107800' => 'ptr', 'Potri.019G084100' => 'ptr', 'Pp3c14_23720' => 'ppa', 'Pp3c16_6340' => 'ppa', 'Pp3c23_13420' => 'ppa', 'Pp3c24_2740' => 'ppa', 'Pp3c25_860' => 'ppa', 'Pp3c8_21750' => 'ppa', 'Prupe.1G273000' => 'ppe', 'Prupe.1G273700' => 'ppe', 'Prupe.1G274100' => 'ppe', 'Prupe.2G023300' => 'ppe', 'Prupe.4G048000' => 'ppe', 'Prupe.4G080400' => 'ppe', 'Prupe.4G181200' => 'ppe', 'Prupe.8G056900' => 'ppe', 'Prupe.8G168700' => 'ppe', 'Psat1g189080' => 'psa', 'Psat1g204760' => 'psa', 'Psat4g175560' => 'psa', 'Psat4g177720' => 'psa', 'Psat5g244240' => 'psa', 'Psat6g010720' => 'psa', 'Psat6g187200' => 'psa', 'Psat7g072040' => 'psa', 'PSO017G3501' => 'pso', 'PSO063G2148' => 'pso', 'PSO063G5608' => 'pso', 'PSO210G6392' => 'pso', 'PSO541G2319' => 'pso', 'PSO541G2836' => 'pso', 'PSO541G4012' => 'pso', 'PSO541G6253' => 'pso', 'PSO675G0580' => 'pso', 'PSO675G0856' => 'pso', 'PSO675G5635' => 'pso', 'PSO675G9157' => 'pso', 'PSO832G1660' => 'pso', 'PSO832G1969' => 'pso', 'QL02p007186' => 'qlo', 'QL02p033904' => 'qlo', 'QL03p064391' => 'qlo', 'QL05p040593' => 'qlo', 'QL05p058242' => 'qlo', 'QL08p021825' => 'qlo', 'QL11p004981' => 'qlo', 'RcHm_v2.0_Chr1g0318301' => 'rch', 'RcHm_v2.0_Chr4g0418501' => 'rch', 'RcHm_v2.0_Chr4g0439971' => 'rch', 'RcHm_v2.0_Chr5g0008541' => 'rch', 'RcHm_v2.0_Chr5g0014101' => 'rch', 'RcHm_v2.0_Chr5g0014131' => 'rch', 'RcHm_v2.0_Chr5g0033621' => 'rch', 'RcHm_v2.0_Chr6g0272041' => 'rch', 'RcHm_v2.0_Chr6g0278831' => 'rch', 'Rhsim02G0130400' => 'rsi', 'Rhsim02G0171100' => 'rsi', 'Rhsim05G0053000' => 'rsi', 'Rhsim05G0053100' => 'rsi', 'Rhsim06G0096500' => 'rsi', 'Rhsim06G0096600' => 'rsi', 'Rhsim06G0199100' => 'rsi', 'Rhsim12G0062300' => 'rsi', 'Rhsim12G0062800' => 'rsi', 'Sabra02G0118600' => 'sbr', 'Sabra04G0027300' => 'sbr', 'Sabra04G0119500' => 'sbr', 'Sabra08G0112500' => 'sbr', 'Sabra11G0036800' => 'sbr', 'Sabra11G0103800' => 'sbr', 'Sabra13G0096300' => 'sbr', 'Sabra16G0262300' => 'sbr', 'Sabra18G0091700' => 'sbr', 'Sabra19G0095400' => 'sbr', 'SalBow6G3080' => 'sbo', 'SalBow7G1157' => 'sbo', 'SalBow7G2123' => 'sbo', 'SalBow7G2285' => 'sbo', 'SalBow7G3537' => 'sbo', 'SalBow8G2947' => 'sbo', 'SalBow8G4463' => 'sbo', 'SalBow8G5466' => 'sbo', 'Sc01g0001750' => 'sci', 'Sc02g0006640' => 'sci', 'Sc02g0006670' => 'sci', 'Sc04g0008220' => 'sci', 'Sc05g0006190' => 'sci', 'Sc08g0002760' => 'sci', 'Sc17g0006170' => 'sci', 'Sc22g0002050' => 'sci', 'Sc23g0001190' => 'sci', 'Sc24g0000980' => 'sci', 'Sed0006245' => 'sed', 'Sed0007543' => 'sed', 'Sed0009411' => 'sed', 'Sed0010765' => 'sed', 'Sed0012944' => 'sed', 'Sed0014682' => 'sed', 'Sed0016174' => 'sed', 'Sed0016796' => 'sed', 'Sed0020317' => 'sed', 'Sed0021467' => 'sed', 'SEGI_01316' => 'sgi', 'SEGI_03374' => 'sgi', 'SEGI_16265' => 'sgi', 'SEGI_18569' => 'sgi', 'SEGI_20351' => 'sgi', 'SEGI_26395' => 'sgi', 'SEGI_29469' => 'sgi', 'SEGI_34771' => 'sgi', 'SEGI_36769' => 'sgi', 'SEGI_37139' => 'sgi', 'SGA_v2.0_scaffold100G29687' => 'sas', 'SGA_v2.0_scaffold118G32472' => 'sas', 'SGA_v2.0_scaffold14G07051' => 'sas', 'SGA_v2.0_scaffold183G39845' => 'sas', 'SGA_v2.0_scaffold1G00174' => 'sas', 'SGA_v2.0_scaffold22G09714' => 'sas', 'SGA_v2.0_scaffold333G48992' => 'sas', 'SGA_v2.0_scaffold46G17491' => 'sas', 'SGA_v2.0_scaffold49G18294' => 'sas', 'SGA_v2.0_scaffold63G21658' => 'sas', 'SHI01741' => 'shi', 'SHI05771' => 'shi', 'SHI18077' => 'shi', 'SHI20525' => 'shi', 'SHI20527' => 'shi', 'SHI20528' => 'shi', 'SMO172G0185' => 'smo', 'SMO198G0020' => 'smo', 'SMO351G0006' => 'smo', 'SMO356G0118' => 'smo', 'SMO358G0296' => 'smo', 'SMO367G0079' => 'smo', 'SMO367G1277' => 'smo', 'Solyc01g014220.3' => 'sly', 'Solyc01g111770.2' => 'sly', 'Solyc02g078180.3' => 'sly', 'Solyc03g006430.3' => 'sly', 'Solyc03g006456.1' => 'sly', 'Solyc03g079860.2' => 'sly', 'Solyc04g079770.3' => 'sly', 'Solyc05g007430.4' => 'sly', 'Solyc07g063150.3' => 'sly', 'Solyc08g016620.3' => 'sly', 'Solyc09g057590.3' => 'sly', 'Solyc09g057600.1' => 'sly', 'Solyc10g009050.3' => 'sly', 'Solyc11g017420.2' => 'sly', 'Sopen01g053810' => 'spe', 'Sopen02g023040' => 'spe', 'Sopen03g002440' => 'spe', 'Sopen04g033350' => 'spe', 'Sopen05g003310' => 'spe', 'Sopen07g004050' => 'spe', 'Sopen07g031340' => 'spe', 'Sopen08g006990' => 'spe', 'Sopen10g004830' => 'spe', 'Sopen11g009370' => 'spe', 'Sp1g24450' => 'spa', 'Sp1g29670' => 'spa', 'Sp1g39600' => 'spa', 'Sp2g11080' => 'spa', 'Sp2g13970' => 'spa', 'Sp4g16130' => 'spa', 'Sp6g13080' => 'spa', 'Sp7g37270' => 'spa', 'TAR371G0065' => 'tar', 'TAR376G0340' => 'tar', 'TAR376G0435' => 'tar', 'TAR381G0002' => 'tar', 'TAR381G1236' => 'tar', 'TAR624G0055' => 'tar', 'TAR624G0324' => 'tar', 'TAR624G0696' => 'tar', 'TAR624G0906' => 'tar', 'TAR625G0107' => 'tar', 'TAR626G0015' => 'tar', 'TAR626G1356' => 'tar', 'TAR627G0888' => 'tar', 'TAR628G0399' => 'tar', 'TAR628G1327' => 'tar', 'TAR629G2831' => 'tar', 'TAR629G2874' => 'tar', 'TAR633G1432' => 'tar', 'TAR633G2771' => 'tar', 'THA.LOC104803394' => 'tha', 'THA.LOC104805153' => 'tha', 'THA.LOC104806784' => 'tha', 'THA.LOC104810473' => 'tha', 'THA.LOC104813100' => 'tha', 'THA.LOC104814215' => 'tha', 'THA.LOC104815554' => 'tha', 'THA.LOC104820544' => 'tha', 'THA.LOC104824754' => 'tha', 'THA.LOC104827717' => 'tha', 'Thecc.02G031400' => 'tca', 'Thecc.02G055900' => 'tca', 'Thecc.02G350800' => 'tca', 'Thecc.06G150900' => 'tca', 'Thecc.06G186600' => 'tca', 'Thecc.07G089600' => 'tca', 'Thecc.08G020400' => 'tca', 'Thecc.08G182100' => 'tca', 'Thhalv10000873m.g' => 'esa', 'Thhalv10004185m.g' => 'esa', 'Thhalv10006981m.g' => 'esa', 'Thhalv10007204m.g' => 'esa', 'Thhalv10011374m.g' => 'esa', 'Thhalv10013482m.g' => 'esa', 'Thhalv10017801m.g' => 'esa', 'Thhalv10024983m.g' => 'esa', 'TPR.G12072' => 'tpr', 'TPR.G15769' => 'tpr', 'TPR.G16504' => 'tpr', 'TPR.G16506' => 'tpr', 'TPR.G24345' => 'tpr', 'TPR.G26666' => 'tpr', 'TPR.G27320' => 'tpr', 'TPR.G31819' => 'tpr', 'TPR.G38879' => 'tpr', 'TPR.G39015' => 'tpr', 'TPR.G8819' => 'tpr', 'TWI09G0924' => 'twi', 'TWI12G0811' => 'twi', 'TWI12G1294' => 'twi', 'TWI31G0150' => 'twi', 'TWI36G1262' => 'twi', 'TWI38G1287' => 'twi', 'TWI38G1633' => 'twi', 'TWI38G1982' => 'twi', 'TWI39G0116' => 'twi', 'TWI60G1011' => 'twi', 'TWI63G0171' => 'twi', 'TWI73G0839' => 'twi', 'TWI79G1511' => 'twi', 'unitig_0.g915' => 'ugi', 'unitig_0.g916' => 'ugi', 'unitig_21.g20219' => 'ugi', 'unitig_21.g20416' => 'ugi', 'unitig_578.g16132' => 'ugi', 'unitig_578.g16718' => 'ugi', 'unitig_62.g23481' => 'ugi', 'unitig_744.g24535' => 'ugi', 'unitig_749.g13525' => 'ugi', 'vmacro01248' => 'vma', 'vmacro02290' => 'vma', 'vmacro10946' => 'vma', 'vmacro11865' => 'vma', 'vmacro12493' => 'vma', 'vmacro17322' => 'vma', 'vmacro21599' => 'vma', 'vmacro23041' => 'vma', 'VMungo0251G0004' => 'vmu', 'VMungo0251G2639' => 'vmu', 'VMungo0251G2967' => 'vmu', 'VMungo0540G0864' => 'vmu', 'VMungo0540G1569' => 'vmu', 'VMungo0647G0317' => 'vmu', 'VMungo0720G1373' => 'vmu', 'VMungo0720G1508' => 'vmu', 'VMungo1080G0485' => 'vmu', 'VMungo1215G3177' => 'vmu', 'Zm00001eb112600' => 'zma', 'Zm00001eb120220' => 'zma', 'Zm00001eb153240' => 'zma', 'Zm00001eb168880' => 'zma', 'Zm00001eb213920' => 'zma', 'Zm00001eb228280' => 'zma', 'Zm00001eb254580' => 'zma', 'Zm00001eb272180' => 'zma', 'Zm00001eb293190' => 'zma', 'Zm00001eb322930' => 'zma', 'Zm00001eb353360' => 'zma', 'Zm00001eb353390' => 'zma', 'Zm00001eb353430' => 'zma', 'Zm00001eb353440' => 'zma', 'Zm00001eb353780' => 'zma' ) $gf_id = 'HOM05D000499' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000499' ) $data_identifier = 'HOM05D000499' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 29, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 12, 'amhyb' => (int) 8, 'aly' => (int) 12, 'aox' => (int) 9, 'arhy' => (int) 26, 'ath' => (int) 8, 'atr' => (int) 7, 'acertr' => (int) 10, 'cqu' => (int) 15, 'bca' => (int) 29, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 11, 'cansat' => (int) 8, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 9, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 8, 'cpa' => (int) 10, 'csa' => (int) 7, 'camsi' => (int) 20, 'dca' => (int) 8, 'din' => (int) 12, 'dzi' => (int) 14, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 6, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 38, 'gra' => (int) 16, 'vvi' => (int) 8, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 5, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 11, 'lja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 11, 'mpo' => (int) 3, 'mbi' => (int) 14, 'mdo' => (int) 14, 'mtr' => (int) 8, 'cme' => (int) 9, 'egut' => (int) 9, 'ama' => (int) 11, 'nta' => (int) 17, 'nnu' => (int) 11, 'oeu' => (int) 18, 'osa' => (int) 8, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 6, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 9, 'rsi' => (int) 9, 'sbr' => (int) 10, 'sbo' => (int) 8, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 10, 'sas' => (int) 10, 'shi' => (int) 6, 'smo' => (int) 7, 'sly' => (int) 14, 'spe' => (int) 10, 'spa' => (int) 8, 'tar' => (int) 19, 'tha' => (int) 10, 'tca' => (int) 8, 'esa' => (int) 8, 'tpr' => (int) 11, 'twi' => (int) 13, 'ugi' => (int) 9, 'vma' => (int) 8, 'vmu' => (int) 10, 'zma' => (int) 15 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb353780' $species_info = array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ) $local_species = 'ccan' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000499', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1066', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p29780' => 'bna', 'A02p33180' => 'bna', 'A03p16470' => 'bna', 'A03p66010' => 'bna', 'A04p25970' => 'bna', 'A06p01270' => 'bna', 'A06p46080' => 'bna', 'A07p11400' => 'bna', 'A08p01840' => 'bna', 'A08p08230' => 'bna', 'A08p25740' => 'bna', 'A09p32070' => 'bna', 'A09p37830' => 'bna', 'A09p42840' => 'bna', 'A09p42850' => 'bna', 'Aa31LG10G2060' => 'aar', 'Aa31LG2G7410' => 'aar', 'Aa31LG6G10200' => 'aar', 'Aa31LG6G16680' => 'aar', 'Aa31LG6G8470' => 'aar', 'Aa31LG9G12730' => 'aar', 'Aa31LG9G13680' => 'aar', 'Aa31LG9G14920' => 'aar', 'Aa31LG9G6650' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4977' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5467' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3254' => 'aag', 'Actinidia02578' => 'ach', 'Actinidia07693' => 'ach', 'Actinidia08413' => 'ach', 'Actinidia08414' => 'ach', 'Actinidia15289' => 'ach', 'Actinidia19871' => 'ach', 'Actinidia21475' => 'ach', 'Actinidia22576' => 'ach', 'Actinidia28327' => 'ach', 'Actinidia32491' => 'ach', 'Actinidia39463' => 'ach', 'Actinidia39571' => 'ach', 'Ah.01g013750' => 'amhyb', 'Ah.01g023210' => 'amhyb', 'Ah.04g164850' => 'amhyb', 'Ah.05g178060' => 'amhyb', 'Ah.07g204270' => 'amhyb', 'Ah.07g208480' => 'amhyb', 'Ah.09g237410' => 'amhyb', 'Ah.14g089460' => 'amhyb', 'AL1G41790' => 'aly', 'AL1G49050' => 'aly', 'AL1G53810' => 'aly', 'AL1G61400' => 'aly', 'AL4G18580' => 'aly', 'AL5G12510' => 'aly', 'AL5G12540' => 'aly', 'AL6G43230' => 'aly', 'AL7G10370' => 'aly', 'AL7G19250' => 'aly', 'AL8G12240' => 'aly', 'AL8G18540' => 'aly', 'Aqoxy1G02409' => 'aox', 'Aqoxy2G03993' => 'aox', 'Aqoxy3G03357' => 'aox', 'Aqoxy4G00785' => 'aox', 'Aqoxy5G02598' => 'aox', 'Aqoxy6G00132' => 'aox', 'Aqoxy7G01776' => 'aox', 'Aqoxy7G02316' => 'aox', 'Aqoxy7G03973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.12AFKW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B8730' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27IQR1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3F75VG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3RE0GA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41TCQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.527VTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FIR39' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5W8UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DA38EV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ63HS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H1I32C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HC27T5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4M8AP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7N3CZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9UVDZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LS1NQA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT1D4B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SKC4TM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCFV76' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF9Q1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQWD9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1ZM88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WE07RT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YCK7VH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJE6Q6' => 'arhy', 'AT1G28240' => 'ath', 'AT1G34550' => 'ath', 'AT1G53040' => 'ath', 'AT2G02910' => 'ath', 'AT4G09630' => 'ath', 'AT4G38500' => 'ath', 'AT5G42660' => 'ath', 'AT5G46220' => 'ath', 'ATR0152G026' => 'atr', 'ATR0564G343' => 'atr', 'ATR0706G151' => 'atr', 'ATR0733G207' => 'atr', 'ATR0751G234' => 'atr', 'ATR0807G048' => 'atr', 'ATR1091G084' => 'atr', 'Atru.chr10.1229' => 'acertr', 'Atru.chr10.1230' => 'acertr', 'Atru.chr10.1874' => 'acertr', 'Atru.chr11.1808' => 'acertr', 'Atru.chr13.1795' => 'acertr', 'Atru.chr13.570' => 'acertr', 'Atru.chr2.2608' => 'acertr', 'Atru.chr2.2609' => 'acertr', 'Atru.chr5.3428' => 'acertr', 'Atru.chr8.1171' => 'acertr', 'AUR62004651' => 'cqu', 'AUR62008675' => 'cqu', 'AUR62010014' => 'cqu', 'AUR62013004' => 'cqu', 'AUR62014825' => 'cqu', 'AUR62015015' => 'cqu', 'AUR62015151' => 'cqu', 'AUR62017020' => 'cqu', 'AUR62019422' => 'cqu', 'AUR62023570' => 'cqu', 'AUR62025571' => 'cqu', 'AUR62029098' => 'cqu', 'AUR62033863' => 'cqu', 'AUR62034296' => 'cqu', 'AUR62040075' => 'cqu', 'BcaB02g07334' => 'bca', 'BcaB02g10575' => 'bca', 'BcaB03g12119' => 'bca', 'BcaB03g12120' => 'bca', 'BcaB03g13945' => 'bca', 'BcaB04g17123' => 'bca', 'BcaB04g17867' => 'bca', 'BcaB04g19839' => 'bca', 'BcaB07g30317' => 'bca', 'BcaB07g32432' => 'bca', 'BcaB07g33362' => 'bca', 'BcaB08g36611' => 'bca', 'BcaC01g00028' => 'bca', 'BcaC01g01356' => 'bca', 'BcaC01g02034' => 'bca', 'BcaC01g06051' => 'bca', 'BcaC03g16839' => 'bca', 'BcaC03g17176' => 'bca', 'BcaC05g26829' => 'bca', 'BcaC06g31490' => 'bca', 'BcaC06g35344' => 'bca', 'BcaC06g36570' => 'bca', 'BcaC07g37537' => 'bca', 'BcaC08g43491' => 'bca', 'BcaC08g43773' => 'bca', 'BcaNung00234' => 'bca', 'BcaNung01982' => 'bca', 'BcaNung03707' => 'bca', 'BcaNung06454' => 'bca', 'BolC2t10762H' => 'bol', 'BolC2t11191H' => 'bol', 'BolC3t14322H' => 'bol', 'BolC3t19747H' => 'bol', 'BolC3t21425H' => 'bol', 'BolC4t27800H' => 'bol', 'BolC5t31423H' => 'bol', 'BolC6t35951H' => 'bol', 'BolC6t36282H' => 'bol', 'BolC7t40678H' => 'bol', 'BolC7t40679H' => 'bol', 'BolC7t42222H' => 'bol', 'BolC7t43492H' => 'bol', 'BolC7t46785H' => 'bol', 'BolC8t47853H' => 'bol', 'BolC9t56805H' => 'bol', 'BraA02t08000Z' => 'bra', 'BraA02t08341Z' => 'bra', 'BraA03t10936Z' => 'bra', 'BraA03t15657Z' => 'bra', 'BraA04t18100Z' => 'bra', 'BraA05t20523Z' => 'bra', 'BraA06t23353Z' => 'bra', 'BraA06t27473Z' => 'bra', 'BraA06t27769Z' => 'bra', 'BraA07t28928Z' => 'bra', 'BraA08t32236Z' => 'bra', 'BraA08t32841Z' => 'bra', 'BraA08t34524Z' => 'bra', 'BraA09t38742Z' => 'bra', 'BraA09t39295Z' => 'bra', 'C02p47180' => 'bna', 'C02p50990' => 'bna', 'C03p19360' => 'bna', 'C03p74950' => 'bna', 'C03p91000' => 'bna', 'C04p63260' => 'bna', 'C05p27050' => 'bna', 'C06p08750' => 'bna', 'C06p11490' => 'bna', 'C07p02820' => 'bna', 'C07p17180' => 'bna', 'C07p29440' => 'bna', 'C07p63730' => 'bna', 'C09p39260' => 'bna', 'CAN.G1164.34' => 'can', 'CAN.G1164.39' => 'can', 'CAN.G1530.3' => 'can', 'CAN.G162.61' => 'can', 'CAN.G176.6' => 'can', 'CAN.G289.49' => 'can', 'CAN.G370.21' => 'can', 'CAN.G370.22' => 'can', 'CAN.G371.117' => 'can', 'CAN.G58.37' => 'can', 'CAN.G588.98' => 'can', 'CANSAT21G2266' => 'cansat', 'CANSAT25G2799' => 'cansat', 'CANSAT35G0862' => 'cansat', 'CANSAT35G1704' => 'cansat', 'CANSAT35G1760' => 'cansat', 'CANSAT56G3971' => 'cansat', 'CANSAT56G4116' => 'cansat', 'CANSAT80G1259' => 'cansat', 'CARHR027730' => 'chi', 'CARHR033880' => 'chi', 'CARHR043270' => 'chi', 'CARHR145330' => 'chi', 'CARHR145340' => 'chi', 'CARHR175570' => 'chi', 'CARHR181570' => 'chi', 'CARHR258470' => 'chi', 'CARHR260490' => 'chi', 'CARHR294220' => 'chi', 'Carub.0001s2668' => 'cru', 'Carub.0001s3257' => 'cru', 'Carub.0001s4220' => 'cru', 'Carub.0005s0179' => 'cru', 'Carub.0006s2807' => 'cru', 'Carub.0007s0039' => 'cru', 'Carub.0008s0169' => 'cru', 'Carub.0008s0636' => 'cru', 'Ca_00338_v3' => 'car', 'Ca_00542_v3' => 'car', 'Ca_01844_v3' => 'car', 'Ca_10611_v3' => 'car', 'Ca_13326_v3' => 'car', 'Ca_17944_v3' => 'car', 'Ca_18546_v3' => 'car', 'Ca_24219_v3' => 'car', 'Ca_29972_v3' => 'car', 'CBR_g3681' => 'cbr', 'CBR_g40021' => 'cbr', 'Cc01_g08140' => 'ccan', 'Cc02_g13410' => 'ccan', 'Cc02_g37480' => 'ccan', 'Cc05_g12030' => 'ccan', 'Cc09_g03370' => 'ccan', 'Cc09_g10300' => 'ccan', 'Cc10_g03530' => 'ccan', 'Cc10_g11380' => 'ccan', 'CDE01G0176' => 'cde', 'CDE02G0675' => 'cde', 'CDE02G0942' => 'cde', 'CDE02G1153' => 'cde', 'CDE02G4177' => 'cde', 'CDE04G2117' => 'cde', 'CDE04G2736' => 'cde', 'CDE08G1161' => 'cde', 'CDE09G1238' => 'cde', 'Cfa000467' => 'cfa', 'Cfa000947' => 'cfa', 'Cfa004969' => 'cfa', 'Cfa005284' => 'cfa', 'Cfa008993' => 'cfa', 'Cfa018187' => 'cfa', 'Cfa018454' => 'cfa', 'Cfa020585' => 'cfa', 'Ciclev10000424m.g' => 'ccl', 'Ciclev10003605m.g' => 'ccl', 'Ciclev10007828m.g' => 'ccl', 'Ciclev10014620m.g' => 'ccl', 'Ciclev10015169m.g' => 'ccl', 'Ciclev10018291m.g' => 'ccl', 'Ciclev10028256m.g' => 'ccl', 'Ciclev10033822m.g' => 'ccl', 'CiPaw.05G060300' => 'cil', 'CiPaw.05G085000' => 'cil', 'CiPaw.06G083700' => 'cil', 'CiPaw.06G120300' => 'cil', 'CiPaw.09G060500' => 'cil', 'CiPaw.09G123800' => 'cil', 'CiPaw.11G169700' => 'cil', 'CiPaw.12G118300' => 'cil', 'CiPaw.15G071000' => 'cil', 'CiPaw.15G081900' => 'cil', 'ClCG01G024610' => 'cla', 'ClCG03G006070' => 'cla', 'ClCG05G019250' => 'cla', 'ClCG09G009500' => 'cla', 'ClCG11G008200' => 'cla', 'ClCG11G018080' => 'cla', 'COL.COLO4_17373' => 'col', 'COL.COLO4_22994' => 'col', 'COL.COLO4_26389' => 'col', 'COL.COLO4_27170' => 'col', 'COL.COLO4_31074' => 'col', 'COL.COLO4_31465' => 'col', 'COL.COLO4_36438' => 'col', 'COL.COLO4_36439' => 'col', 'Cpa.g.c38781' => 'cpa', 'Cpa.g.sc128.12' => 'cpa', 'Cpa.g.sc166.7' => 'cpa', 'Cpa.g.sc166.8' => 'cpa', 'Cpa.g.sc20.111' => 'cpa', 'Cpa.g.sc27.31' => 'cpa', 'Cpa.g.sc64.36' => 'cpa', 'Cpa.g.sc64.37' => 'cpa', 'Cpa.g.sc66.49' => 'cpa', 'Cpa.g.sc80.64' => 'cpa', 'CsaV3_1G012320' => 'csa', 'CsaV3_2G008480' => 'csa', 'CsaV3_2G033450' => 'csa', 'CsaV3_3G044830' => 'csa', 'CsaV3_4G033710' => 'csa', 'CsaV3_6G051730' => 'csa', 'CsaV3_7G025350' => 'csa', 'CSS0001067' => 'camsi', 'CSS0005996' => 'camsi', 'CSS0006590' => 'camsi', 'CSS0009673' => 'camsi', 'CSS0010201' => 'camsi', 'CSS0010549' => 'camsi', 'CSS0011364' => 'camsi', 'CSS0014473' => 'camsi', 'CSS0014961' => 'camsi', 'CSS0020191' => 'camsi', 'CSS0021165' => 'camsi', 'CSS0022306' => 'camsi', 'CSS0030591' => 'camsi', 'CSS0030696' => 'camsi', 'CSS0032653' => 'camsi', 'CSS0037487' => 'camsi', 'CSS0041102' => 'camsi', 'CSS0041261' => 'camsi', 'CSS0046246' => 'camsi', 'CSS0049256' => 'camsi', 'DCAR_004075' => 'dca', 'DCAR_011538' => 'dca', 'DCAR_019553' => 'dca', 'DCAR_020952' => 'dca', 'DCAR_021739' => 'dca', 'DCAR_027407' => 'dca', 'DCAR_027913' => 'dca', 'DCAR_028066' => 'dca', 'Dinv05899' => 'din', 'Dinv07563' => 'din', 'Dinv08010' => 'din', 'Dinv14125' => 'din', 'Dinv20172' => 'din', 'Dinv30743' => 'din', 'Dinv31229' => 'din', 'Dinv34162' => 'din', 'Dinv36028' => 'din', 'Dinv39368' => 'din', 'Dinv40565' => 'din', 'Dinv41706' => 'din', 'Duzib052G0089' => 'dzi', 'Duzib116G0641' => 'dzi', 'Duzib132G0069' => 'dzi', 'Duzib132G1219' => 'dzi', 'Duzib147G0278' => 'dzi', 'Duzib160G0480' => 'dzi', 'Duzib170G0661' => 'dzi', 'Duzib177G0591' => 'dzi', 'Duzib187G1353' => 'dzi', 'Duzib192G0858' => 'dzi', 'Duzib192G0883' => 'dzi', 'Duzib213G0506' => 'dzi', 'Duzib235G0289' => 'dzi', 'Duzib251G0422' => 'dzi', 'ECA232G3898' => 'eca', 'ECA233G5950' => 'eca', 'ECA234G1699' => 'eca', 'ECA234G2421' => 'eca', 'ECA236G0426' => 'eca', 'ECA236G4331' => 'eca', 'ECA248G2573' => 'eca', 'EL10Ac1g00077' => 'bvu', 'EL10Ac1g01746' => 'bvu', 'EL10Ac2g03464' => 'bvu', 'EL10Ac4g08176' => 'bvu', 'EL10Ac7g17521' => 'bvu', 'EL10Ac8g20386' => 'bvu', 'EL10Ac9g21343' => 'bvu', 'EL10Ac9g22688' => 'bvu', 'Eucgr.B03434' => 'egr', 'Eucgr.D00618' => 'egr', 'Eucgr.E02395' => 'egr', 'Eucgr.F01129' => 'egr', 'Eucgr.F02622' => 'egr', 'Eucgr.F04207' => 'egr', 'FAN01G0570' => 'fan', 'FAN03G3351' => 'fan', 'FAN06G3702' => 'fan', 'FAN07G2149' => 'fan', 'FAN10G3758' => 'fan', 'FAN11G1170' => 'fan', 'FAN11G2050' => 'fan', 'FAN11G2724' => 'fan', 'FAN12G1700' => 'fan', 'FAN12G2028' => 'fan', 'FAN15G1160' => 'fan', 'FAN15G3063' => 'fan', 'FAN16G2540' => 'fan', 'FAN16G3077' => 'fan', 'FAN16G3624' => 'fan', 'FAN17G0221' => 'fan', 'FAN20G2492' => 'fan', 'FAN20G2905' => 'fan', 'FAN21G0548' => 'fan', 'FAN21G1300' => 'fan', 'FAN22G0077' => 'fan', 'FAN22G1315' => 'fan', 'FAN24G1280' => 'fan', 'FAN24G1445' => 'fan', 'FAN24G3527' => 'fan', 'FAN25G0464' => 'fan', 'FAN25G2885' => 'fan', 'FAN25G3270' => 'fan', 'FAN27G1101' => 'fan', 'FAN27G2846' => 'fan', 'FAN27G3524' => 'fan', 'FvH4_2g11770' => 'fve', 'FvH4_2g15630' => 'fve', 'FvH4_3g05570' => 'fve', 'FvH4_3g09110' => 'fve', 'FvH4_3g19940' => 'fve', 'FvH4_4g04821' => 'fve', 'FvH4_4g31480' => 'fve', 'FvH4_7g01740' => 'fve', 'Glyma.05G130400' => 'gma', 'Glyma.05G156400' => 'gma', 'Glyma.07G197000' => 'gma', 'Glyma.08G085151' => 'gma', 'Glyma.08G114500' => 'gma', 'Glyma.08G300400' => 'gma', 'Glyma.10G215800' => 'gma', 'Glyma.12G224400' => 'gma', 'Glyma.13G179300' => 'gma', 'Glyma.13G218151' => 'gma', 'Glyma.13G238800' => 'gma', 'Glyma.13G276900' => 'gma', 'Glyma.14G078200' => 'gma', 'Glyma.15G074500' => 'gma', 'Glyma.15G094100' => 'gma', 'Glyma.17G247200' => 'gma', 'Glyma.18G120100' => 'gma', 'Glyma.20G176000' => 'gma', 'Gohir.A01G063600' => 'ghi', 'Gohir.A01G170301' => 'ghi', 'Gohir.A02G060500' => 'ghi', 'Gohir.A05G133850' => 'ghi', 'Gohir.A05G161400' => 'ghi', 'Gohir.A06G012900' => 'ghi', 'Gohir.A06G035901' => 'ghi', 'Gohir.A06G127100' => 'ghi', 'Gohir.A06G210500' => 'ghi', 'Gohir.A08G008650' => 'ghi', 'Gohir.A09G072700' => 'ghi', 'Gohir.A09G088301' => 'ghi', 'Gohir.A10G040600' => 'ghi', 'Gohir.A12G036300' => 'ghi', 'Gohir.A12G143350' => 'ghi', 'Gohir.A12G165500' => 'ghi', 'Gohir.A13G145700' => 'ghi', 'Gohir.D01G050000' => 'ghi', 'Gohir.D01G051366' => 'ghi', 'Gohir.D01G161350' => 'ghi', 'Gohir.D02G065900' => 'ghi', 'Gohir.D05G164200' => 'ghi', 'Gohir.D05G355500' => 'ghi', 'Gohir.D06G010400' => 'ghi', 'Gohir.D06G111250' => 'ghi', 'Gohir.D06G132000' => 'ghi', 'Gohir.D06G210500' => 'ghi', 'Gohir.D07G165675' => 'ghi', 'Gohir.D08G062240' => 'ghi', 'Gohir.D08G086101' => 'ghi', 'Gohir.D08G138060' => 'ghi', 'Gohir.D09G072300' => 'ghi', 'Gohir.D10G041400' => 'ghi', 'Gohir.D11G191020' => 'ghi', 'Gohir.D11G212066' => 'ghi', 'Gohir.D12G036300' => 'ghi', 'Gohir.D12G168600' => 'ghi', 'Gohir.D13G150600' => 'ghi', 'Gorai.001G057300' => 'gra', 'Gorai.002G069900' => 'gra', 'Gorai.002G200000' => 'gra', 'Gorai.003G067600' => 'gra', 'Gorai.005G074800' => 'gra', 'Gorai.006G087300' => 'gra', 'Gorai.008G037500' => 'gra', 'Gorai.008G181400' => 'gra', 'Gorai.009G169400' => 'gra', 'Gorai.009G387900' => 'gra', 'Gorai.010G013300' => 'gra', 'Gorai.010G153800' => 'gra', 'Gorai.010G255800' => 'gra', 'Gorai.011G043700' => 'gra', 'Gorai.011G198900' => 'gra', 'Gorai.013G168400' => 'gra', 'GSVIVG01005212001' => 'vvi', 'GSVIVG01006163001' => 'vvi', 'GSVIVG01009625001' => 'vvi', 'GSVIVG01014338001' => 'vvi', 'GSVIVG01020005001' => 'vvi', 'GSVIVG01021450001' => 'vvi', 'GSVIVG01023975001' => 'vvi', 'GSVIVG01034490001' => 'vvi', 'HanXRQChr04g0112071' => 'han', 'HanXRQChr05g0131151' => 'han', 'HanXRQChr09g0262371' => 'han', 'HanXRQChr09g0268401' => 'han', 'HanXRQChr10g0279241' => 'han', 'HanXRQChr10g0297961' => 'han', 'HanXRQChr11g0326231' => 'han', 'HanXRQChr11g0328471' => 'han', 'HanXRQChr16g0507941' => 'han', 'HanXRQChr17g0560211' => 'han', 'Haze_02108' => 'cav', 'Haze_02428' => 'cav', 'Haze_05593' => 'cav', 'Haze_06448' => 'cav', 'Haze_09427' => 'cav', 'Haze_12022' => 'cav', 'Haze_17612' => 'cav', 'Haze_17928' => 'cav', 'Hma1.2p1_0032F.1_g019250' => 'hma', 'Hma1.2p1_0163F.1_g072690' => 'hma', 'Hma1.2p1_0265F.1_g106710' => 'hma', 'Hma1.2p1_0286F.1_g113970' => 'hma', 'Hma1.2p1_0363F.1_g136640' => 'hma', 'Hma1.2p1_0584F.1_g183470' => 'hma', 'Hma1.2p1_0885F.1_g232570' => 'hma', 'HPP92_006022' => 'vpl', 'HPP92_007320' => 'vpl', 'HPP92_011521' => 'vpl', 'HPP92_019387' => 'vpl', 'HPP92_024038' => 'vpl', 'Hund05891' => 'sun', 'Hund06450' => 'sun', 'Hund12053' => 'sun', 'Hund16800' => 'sun', 'Hund21222' => 'sun', 'Hund22896' => 'sun', 'Hund23746' => 'sun', 'Hund27083' => 'sun', 'Lalb_Chr02g0141831' => 'lal', 'Lalb_Chr02g0141841' => 'lal', 'Lalb_Chr05g0220411' => 'lal', 'Lalb_Chr06g0162081' => 'lal', 'Lalb_Chr09g0327651' => 'lal', 'Lalb_Chr13g0295051' => 'lal', 'Lalb_Chr15g0086801' => 'lal', 'Lalb_Chr16g0383781' => 'lal', 'Lalb_Chr16g0383791' => 'lal', 'Lalb_Chr18g0055441' => 'lal', 'Lalb_Chr18g0059611' => 'lal', 'Lalb_Chr20g0109661' => 'lal', 'Lalb_Chr20g0109831' => 'lal', 'Lalb_Chr20g0121871' => 'lal', 'Lalb_Chr22g0355361' => 'lal', 'Lalb_Chr25g0286371' => 'lal', 'Lj1A1187G43' => 'lonja', 'Lj1A1205T50' => 'lonja', 'Lj1A800G33' => 'lonja', 'Lj1C1187T7' => 'lonja', 'Lj1C843T11' => 'lonja', 'Lj1g0010940' => 'lja', 'Lj2A288T69' => 'lonja', 'Lj3g0024276' => 'lja', 'Lj4A47T76' => 'lonja', 'Lj4g0005805' => 'lja', 'Lj4g0006097' => 'lja', 'Lj4g0008528' => 'lja', 'Lj4g0024907' => 'lja', 'Lj5g0012472' => 'lja', 'Lj5g0018648' => 'lja', 'Lj6C789G1' => 'lonja', 'Lj6g0004000' => 'lja', 'Lj7A292G67' => 'lonja', 'Lj7A292T64' => 'lonja', 'Lj9A400T58' => 'lonja', 'Lsat_1_v5_gn_1_126181' => 'lsa', 'Lsat_1_v5_gn_4_123041' => 'lsa', 'Lsat_1_v5_gn_4_133620' => 'lsa', 'Lsat_1_v5_gn_4_53221' => 'lsa', 'Lsat_1_v5_gn_4_71961' => 'lsa', 'Lsat_1_v5_gn_7_105241' => 'lsa', 'Lsat_1_v5_gn_7_21361' => 'lsa', 'Lsat_1_v5_gn_7_28860' => 'lsa', 'Lsat_1_v5_gn_7_31260' => 'lsa', 'Lsat_1_v5_gn_8_52801' => 'lsa', 'Manes.02G191400' => 'mes', 'Manes.03G110100' => 'mes', 'Manes.04G071100' => 'mes', 'Manes.05G100500' => 'mes', 'Manes.05G164700' => 'mes', 'Manes.15G087000' => 'mes', 'Manes.15G121500' => 'mes', 'Manes.16G028300' => 'mes', 'Manes.17G046100' => 'mes', 'Manes.17G069800' => 'mes', 'Manes.18G100500' => 'mes', 'Mapoly0002s0109' => 'mpo', 'Mapoly0024s0007' => 'mpo', 'Mapoly0089s0032' => 'mpo', 'MBI04_g42241_MAGBIO' => 'mbi', 'MBI05_g11988_MAGBIO' => 'mbi', 'MBI05_g35452_MAGBIO' => 'mbi', 'MBI07_g30179_MAGBIO' => 'mbi', 'MBI07_g35859_MAGBIO' => 'mbi', 'MBI07_g35860_MAGBIO' => 'mbi', 'MBI07_g37166_MAGBIO' => 'mbi', 'MBI08_g18172_MAGBIO' => 'mbi', 'MBI09_g08441_MAGBIO' => 'mbi', 'MBI13_g01676_MAGBIO' => 'mbi', 'MBI14_g42955_MAGBIO' => 'mbi', 'MBI16_g13161_MAGBIO' => 'mbi', 'MBI17_g27204_MAGBIO' => 'mbi', 'MBI19_g21595_MAGBIO' => 'mbi', 'MD00G1148400' => 'mdo', 'MD02G1301200' => 'mdo', 'MD03G1227800' => 'mdo', 'MD05G1041100' => 'mdo', 'MD05G1124800' => 'mdo', 'MD05G1284000' => 'mdo', 'MD05G1338800' => 'mdo', 'MD05G1338900' => 'mdo', 'MD07G1022800' => 'mdo', 'MD10G1047500' => 'mdo', 'MD10G1127500' => 'mdo', 'MD10G1262300' => 'mdo', 'MD10G1293800' => 'mdo', 'MD16G1074300' => 'mdo', 'Medtr1g021670' => 'mtr', 'Medtr1g096320' => 'mtr', 'Medtr2g013690' => 'mtr', 'Medtr2g019450' => 'mtr', 'Medtr2g085170' => 'mtr', 'Medtr4g088785' => 'mtr', 'Medtr8g055930' => 'mtr', 'Medtr8g085850' => 'mtr', 'MELO3C002605.2' => 'cme', 'MELO3C003891.2' => 'cme', 'MELO3C004012.2' => 'cme', 'MELO3C007134.2' => 'cme', 'MELO3C008118.2' => 'cme', 'MELO3C016700.2' => 'cme', 'MELO3C024127.2' => 'cme', 'MELO3C033361.2' => 'cme', 'MELO3C033362.2' => 'cme', 'Migut.C00430' => 'egut', 'Migut.C01246' => 'egut', 'Migut.E00101' => 'egut', 'Migut.H01486' => 'egut', 'Migut.H01939' => 'egut', 'Migut.K00360' => 'egut', 'Migut.M00910' => 'egut', 'Migut.M01139' => 'egut', 'Migut.N02677' => 'egut', 'MSTRG.13252' => 'ama', 'MSTRG.14701' => 'ama', 'MSTRG.1521' => 'ama', 'MSTRG.15884' => 'ama', 'MSTRG.16242' => 'ama', 'MSTRG.22285' => 'ama', 'MSTRG.22444' => 'ama', 'MSTRG.2349' => 'ama', 'MSTRG.26308' => 'ama', 'MSTRG.28296' => 'ama', 'MSTRG.9895' => 'ama', 'Nitab4.5_0000110g0060' => 'nta', 'Nitab4.5_0000420g0130' => 'nta', 'Nitab4.5_0000422g0030' => 'nta', 'Nitab4.5_0000560g0180' => 'nta', 'Nitab4.5_0000703g0100' => 'nta', 'Nitab4.5_0000786g0200' => 'nta', 'Nitab4.5_0001336g0020' => 'nta', 'Nitab4.5_0001796g0030' => 'nta', 'Nitab4.5_0003348g0060' => 'nta', 'Nitab4.5_0003698g0040' => 'nta', 'Nitab4.5_0003942g0090' => 'nta', 'Nitab4.5_0004775g0070' => 'nta', 'Nitab4.5_0004864g0030' => 'nta', 'Nitab4.5_0005615g0020' => 'nta', 'Nitab4.5_0009288g0030' => 'nta', 'Nitab4.5_0009341g0010' => 'nta', 'Nitab4.5_0009535g0010' => 'nta', 'Nn1g03995' => 'nnu', 'Nn1g04100' => 'nnu', 'Nn1g06530' => 'nnu', 'Nn3g16404' => 'nnu', 'Nn3g17212' => 'nnu', 'Nn3g20776' => 'nnu', 'Nn3g21923' => 'nnu', 'Nn5g27737' => 'nnu', 'Nn5g29461' => 'nnu', 'Nn7g38355' => 'nnu', 'Nn8g39873' => 'nnu', 'Oeu000548.2' => 'oeu', 'Oeu004672.1' => 'oeu', 'Oeu015605.2' => 'oeu', 'Oeu016092.1' => 'oeu', 'Oeu017879.3' => 'oeu', 'Oeu024910.1' => 'oeu', 'Oeu028965.1' => 'oeu', 'Oeu031269.1' => 'oeu', 'Oeu031270.1' => 'oeu', 'Oeu032535.1' => 'oeu', 'Oeu034151.1' => 'oeu', 'Oeu034152.1' => 'oeu', 'Oeu034588.2' => 'oeu', 'Oeu050846.1' => 'oeu', 'Oeu050849.2' => 'oeu', 'Oeu051063.2' => 'oeu', 'Oeu052368.1' => 'oeu', 'Oeu052370.1' => 'oeu', 'Os01g0210400' => 'osa', 'Os01g0304300' => 'osa', 'Os01g0749100' => 'osa', 'Os02g0745800' => 'osa', 'Os03g0769050' => 'osa', 'Os05g0531500' => 'osa', 'Os06g0724300' => 'osa', 'Os11g0198100' => 'osa', 'Peaxi162Scf00069g01425' => 'pax', 'Peaxi162Scf00280g00811' => 'pax', 'Peaxi162Scf00310g00615' => 'pax', 'Peaxi162Scf00362g00542' => 'pax', 'Peaxi162Scf00461g00310' => 'pax', 'Peaxi162Scf00530g00118' => 'pax', 'Peaxi162Scf00541g00057' => 'pax', 'Peaxi162Scf00661g00017' => 'pax', 'Peaxi162Scf00926g00027' => 'pax', 'Peaxi162Scf01064g00263' => 'pax', 'Peaxi162Scf01211g00135' => 'pax', 'PGR004G2336' => 'pgr', 'PGR042G0327' => 'pgr', 'PGR042G1957' => 'pgr', 'PGR042G2003' => 'pgr', 'PGR042G3929' => 'pgr', 'PGR083G1137' => 'pgr', 'PGR083G1364' => 'pgr', 'PGSC0003DMG400003381' => 'stu', 'PGSC0003DMG400003417' => 'stu', 'PGSC0003DMG400008981' => 'stu', 'PGSC0003DMG400012417' => 'stu', 'PGSC0003DMG400012823' => 'stu', 'PGSC0003DMG400016885' => 'stu', 'PGSC0003DMG400022812' => 'stu', 'PGSC0003DMG400029726' => 'stu', 'PGSC0003DMG401009243' => 'stu', 'PGSC0003DMG401031505' => 'stu', 'PGSC0003DMG402031505' => 'stu', 'Phvul.001G017600' => 'pvu', 'Phvul.002G193500' => 'pvu', 'Phvul.002G228900' => 'pvu', 'Phvul.002G236800' => 'pvu', 'Phvul.003G049500' => 'pvu', 'Phvul.005G072000' => 'pvu', 'Phvul.006G164800' => 'pvu', 'Phvul.006G185100' => 'pvu', 'Phvul.007G090000' => 'pvu', 'Potri.001G399800' => 'ptr', 'Potri.002G149900' => 'ptr', 'Potri.004G044100' => 'ptr', 'Potri.004G177600' => 'ptr', 'Potri.009G138000' => 'ptr', 'Potri.010G094000' => 'ptr', 'Potri.011G053000' => 'ptr', 'Potri.011G119300' => 'ptr', 'Potri.013G113700' => 'ptr', 'Potri.018G107800' => 'ptr', 'Potri.019G084100' => 'ptr', 'Pp3c14_23720' => 'ppa', 'Pp3c16_6340' => 'ppa', 'Pp3c23_13420' => 'ppa', 'Pp3c24_2740' => 'ppa', 'Pp3c25_860' => 'ppa', 'Pp3c8_21750' => 'ppa', 'Prupe.1G273000' => 'ppe', 'Prupe.1G273700' => 'ppe', 'Prupe.1G274100' => 'ppe', 'Prupe.2G023300' => 'ppe', 'Prupe.4G048000' => 'ppe', 'Prupe.4G080400' => 'ppe', 'Prupe.4G181200' => 'ppe', 'Prupe.8G056900' => 'ppe', 'Prupe.8G168700' => 'ppe', 'Psat1g189080' => 'psa', 'Psat1g204760' => 'psa', 'Psat4g175560' => 'psa', 'Psat4g177720' => 'psa', 'Psat5g244240' => 'psa', 'Psat6g010720' => 'psa', 'Psat6g187200' => 'psa', 'Psat7g072040' => 'psa', 'PSO017G3501' => 'pso', 'PSO063G2148' => 'pso', 'PSO063G5608' => 'pso', 'PSO210G6392' => 'pso', 'PSO541G2319' => 'pso', 'PSO541G2836' => 'pso', 'PSO541G4012' => 'pso', 'PSO541G6253' => 'pso', 'PSO675G0580' => 'pso', 'PSO675G0856' => 'pso', 'PSO675G5635' => 'pso', 'PSO675G9157' => 'pso', 'PSO832G1660' => 'pso', 'PSO832G1969' => 'pso', 'QL02p007186' => 'qlo', 'QL02p033904' => 'qlo', 'QL03p064391' => 'qlo', 'QL05p040593' => 'qlo', 'QL05p058242' => 'qlo', 'QL08p021825' => 'qlo', 'QL11p004981' => 'qlo', 'RcHm_v2.0_Chr1g0318301' => 'rch', 'RcHm_v2.0_Chr4g0418501' => 'rch', 'RcHm_v2.0_Chr4g0439971' => 'rch', 'RcHm_v2.0_Chr5g0008541' => 'rch', 'RcHm_v2.0_Chr5g0014101' => 'rch', 'RcHm_v2.0_Chr5g0014131' => 'rch', 'RcHm_v2.0_Chr5g0033621' => 'rch', 'RcHm_v2.0_Chr6g0272041' => 'rch', 'RcHm_v2.0_Chr6g0278831' => 'rch', 'Rhsim02G0130400' => 'rsi', 'Rhsim02G0171100' => 'rsi', 'Rhsim05G0053000' => 'rsi', 'Rhsim05G0053100' => 'rsi', 'Rhsim06G0096500' => 'rsi', 'Rhsim06G0096600' => 'rsi', 'Rhsim06G0199100' => 'rsi', 'Rhsim12G0062300' => 'rsi', 'Rhsim12G0062800' => 'rsi', 'Sabra02G0118600' => 'sbr', 'Sabra04G0027300' => 'sbr', 'Sabra04G0119500' => 'sbr', 'Sabra08G0112500' => 'sbr', 'Sabra11G0036800' => 'sbr', 'Sabra11G0103800' => 'sbr', 'Sabra13G0096300' => 'sbr', 'Sabra16G0262300' => 'sbr', 'Sabra18G0091700' => 'sbr', 'Sabra19G0095400' => 'sbr', 'SalBow6G3080' => 'sbo', 'SalBow7G1157' => 'sbo', 'SalBow7G2123' => 'sbo', 'SalBow7G2285' => 'sbo', 'SalBow7G3537' => 'sbo', 'SalBow8G2947' => 'sbo', 'SalBow8G4463' => 'sbo', 'SalBow8G5466' => 'sbo', 'Sc01g0001750' => 'sci', 'Sc02g0006640' => 'sci', 'Sc02g0006670' => 'sci', 'Sc04g0008220' => 'sci', 'Sc05g0006190' => 'sci', 'Sc08g0002760' => 'sci', 'Sc17g0006170' => 'sci', 'Sc22g0002050' => 'sci', 'Sc23g0001190' => 'sci', 'Sc24g0000980' => 'sci', 'Sed0006245' => 'sed', 'Sed0007543' => 'sed', 'Sed0009411' => 'sed', 'Sed0010765' => 'sed', 'Sed0012944' => 'sed', 'Sed0014682' => 'sed', 'Sed0016174' => 'sed', 'Sed0016796' => 'sed', 'Sed0020317' => 'sed', 'Sed0021467' => 'sed', 'SEGI_01316' => 'sgi', 'SEGI_03374' => 'sgi', 'SEGI_16265' => 'sgi', 'SEGI_18569' => 'sgi', 'SEGI_20351' => 'sgi', 'SEGI_26395' => 'sgi', 'SEGI_29469' => 'sgi', 'SEGI_34771' => 'sgi', 'SEGI_36769' => 'sgi', 'SEGI_37139' => 'sgi', 'SGA_v2.0_scaffold100G29687' => 'sas', 'SGA_v2.0_scaffold118G32472' => 'sas', 'SGA_v2.0_scaffold14G07051' => 'sas', 'SGA_v2.0_scaffold183G39845' => 'sas', 'SGA_v2.0_scaffold1G00174' => 'sas', 'SGA_v2.0_scaffold22G09714' => 'sas', 'SGA_v2.0_scaffold333G48992' => 'sas', 'SGA_v2.0_scaffold46G17491' => 'sas', 'SGA_v2.0_scaffold49G18294' => 'sas', 'SGA_v2.0_scaffold63G21658' => 'sas', 'SHI01741' => 'shi', 'SHI05771' => 'shi', 'SHI18077' => 'shi', 'SHI20525' => 'shi', 'SHI20527' => 'shi', 'SHI20528' => 'shi', 'SMO172G0185' => 'smo', 'SMO198G0020' => 'smo', 'SMO351G0006' => 'smo', 'SMO356G0118' => 'smo', 'SMO358G0296' => 'smo', 'SMO367G0079' => 'smo', 'SMO367G1277' => 'smo', 'Solyc01g014220.3' => 'sly', 'Solyc01g111770.2' => 'sly', 'Solyc02g078180.3' => 'sly', 'Solyc03g006430.3' => 'sly', 'Solyc03g006456.1' => 'sly', 'Solyc03g079860.2' => 'sly', 'Solyc04g079770.3' => 'sly', 'Solyc05g007430.4' => 'sly', 'Solyc07g063150.3' => 'sly', 'Solyc08g016620.3' => 'sly', 'Solyc09g057590.3' => 'sly', 'Solyc09g057600.1' => 'sly', 'Solyc10g009050.3' => 'sly', 'Solyc11g017420.2' => 'sly', 'Sopen01g053810' => 'spe', 'Sopen02g023040' => 'spe', 'Sopen03g002440' => 'spe', 'Sopen04g033350' => 'spe', 'Sopen05g003310' => 'spe', 'Sopen07g004050' => 'spe', 'Sopen07g031340' => 'spe', 'Sopen08g006990' => 'spe', 'Sopen10g004830' => 'spe', 'Sopen11g009370' => 'spe', 'Sp1g24450' => 'spa', 'Sp1g29670' => 'spa', 'Sp1g39600' => 'spa', 'Sp2g11080' => 'spa', 'Sp2g13970' => 'spa', 'Sp4g16130' => 'spa', 'Sp6g13080' => 'spa', 'Sp7g37270' => 'spa', 'TAR371G0065' => 'tar', 'TAR376G0340' => 'tar', 'TAR376G0435' => 'tar', 'TAR381G0002' => 'tar', 'TAR381G1236' => 'tar', 'TAR624G0055' => 'tar', 'TAR624G0324' => 'tar', 'TAR624G0696' => 'tar', 'TAR624G0906' => 'tar', 'TAR625G0107' => 'tar', 'TAR626G0015' => 'tar', 'TAR626G1356' => 'tar', 'TAR627G0888' => 'tar', 'TAR628G0399' => 'tar', 'TAR628G1327' => 'tar', 'TAR629G2831' => 'tar', 'TAR629G2874' => 'tar', 'TAR633G1432' => 'tar', 'TAR633G2771' => 'tar', 'THA.LOC104803394' => 'tha', 'THA.LOC104805153' => 'tha', 'THA.LOC104806784' => 'tha', 'THA.LOC104810473' => 'tha', 'THA.LOC104813100' => 'tha', 'THA.LOC104814215' => 'tha', 'THA.LOC104815554' => 'tha', 'THA.LOC104820544' => 'tha', 'THA.LOC104824754' => 'tha', 'THA.LOC104827717' => 'tha', 'Thecc.02G031400' => 'tca', 'Thecc.02G055900' => 'tca', 'Thecc.02G350800' => 'tca', 'Thecc.06G150900' => 'tca', 'Thecc.06G186600' => 'tca', 'Thecc.07G089600' => 'tca', 'Thecc.08G020400' => 'tca', 'Thecc.08G182100' => 'tca', 'Thhalv10000873m.g' => 'esa', 'Thhalv10004185m.g' => 'esa', 'Thhalv10006981m.g' => 'esa', 'Thhalv10007204m.g' => 'esa', 'Thhalv10011374m.g' => 'esa', 'Thhalv10013482m.g' => 'esa', 'Thhalv10017801m.g' => 'esa', 'Thhalv10024983m.g' => 'esa', 'TPR.G12072' => 'tpr', 'TPR.G15769' => 'tpr', 'TPR.G16504' => 'tpr', 'TPR.G16506' => 'tpr', 'TPR.G24345' => 'tpr', 'TPR.G26666' => 'tpr', 'TPR.G27320' => 'tpr', 'TPR.G31819' => 'tpr', 'TPR.G38879' => 'tpr', 'TPR.G39015' => 'tpr', 'TPR.G8819' => 'tpr', 'TWI09G0924' => 'twi', 'TWI12G0811' => 'twi', 'TWI12G1294' => 'twi', 'TWI31G0150' => 'twi', 'TWI36G1262' => 'twi', 'TWI38G1287' => 'twi', 'TWI38G1633' => 'twi', 'TWI38G1982' => 'twi', 'TWI39G0116' => 'twi', 'TWI60G1011' => 'twi', 'TWI63G0171' => 'twi', 'TWI73G0839' => 'twi', 'TWI79G1511' => 'twi', 'unitig_0.g915' => 'ugi', 'unitig_0.g916' => 'ugi', 'unitig_21.g20219' => 'ugi', 'unitig_21.g20416' => 'ugi', 'unitig_578.g16132' => 'ugi', 'unitig_578.g16718' => 'ugi', 'unitig_62.g23481' => 'ugi', 'unitig_744.g24535' => 'ugi', 'unitig_749.g13525' => 'ugi', 'vmacro01248' => 'vma', 'vmacro02290' => 'vma', 'vmacro10946' => 'vma', 'vmacro11865' => 'vma', 'vmacro12493' => 'vma', 'vmacro17322' => 'vma', 'vmacro21599' => 'vma', 'vmacro23041' => 'vma', 'VMungo0251G0004' => 'vmu', 'VMungo0251G2639' => 'vmu', 'VMungo0251G2967' => 'vmu', 'VMungo0540G0864' => 'vmu', 'VMungo0540G1569' => 'vmu', 'VMungo0647G0317' => 'vmu', 'VMungo0720G1373' => 'vmu', 'VMungo0720G1508' => 'vmu', 'VMungo1080G0485' => 'vmu', 'VMungo1215G3177' => 'vmu', 'Zm00001eb112600' => 'zma', 'Zm00001eb120220' => 'zma', 'Zm00001eb153240' => 'zma', 'Zm00001eb168880' => 'zma', 'Zm00001eb213920' => 'zma', 'Zm00001eb228280' => 'zma', 'Zm00001eb254580' => 'zma', 'Zm00001eb272180' => 'zma', 'Zm00001eb293190' => 'zma', 'Zm00001eb322930' => 'zma', 'Zm00001eb353360' => 'zma', 'Zm00001eb353390' => 'zma', 'Zm00001eb353430' => 'zma', 'Zm00001eb353440' => 'zma', 'Zm00001eb353780' => 'zma' ), 'gf_id' => 'HOM05D000499', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000499' ), 'data_identifier' => 'HOM05D000499', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000499', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1066', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p29780' => 'bna', 'A02p33180' => 'bna', 'A03p16470' => 'bna', 'A03p66010' => 'bna', 'A04p25970' => 'bna', 'A06p01270' => 'bna', 'A06p46080' => 'bna', 'A07p11400' => 'bna', 'A08p01840' => 'bna', 'A08p08230' => 'bna', 'A08p25740' => 'bna', 'A09p32070' => 'bna', 'A09p37830' => 'bna', 'A09p42840' => 'bna', 'A09p42850' => 'bna', 'Aa31LG10G2060' => 'aar', 'Aa31LG2G7410' => 'aar', 'Aa31LG6G10200' => 'aar', 'Aa31LG6G16680' => 'aar', 'Aa31LG6G8470' => 'aar', 'Aa31LG9G12730' => 'aar', 'Aa31LG9G13680' => 'aar', 'Aa31LG9G14920' => 'aar', 'Aa31LG9G6650' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4977' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5467' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3254' => 'aag', 'Actinidia02578' => 'ach', 'Actinidia07693' => 'ach', 'Actinidia08413' => 'ach', 'Actinidia08414' => 'ach', 'Actinidia15289' => 'ach', 'Actinidia19871' => 'ach', 'Actinidia21475' => 'ach', 'Actinidia22576' => 'ach', 'Actinidia28327' => 'ach', 'Actinidia32491' => 'ach', 'Actinidia39463' => 'ach', 'Actinidia39571' => 'ach', 'Ah.01g013750' => 'amhyb', 'Ah.01g023210' => 'amhyb', 'Ah.04g164850' => 'amhyb', 'Ah.05g178060' => 'amhyb', 'Ah.07g204270' => 'amhyb', 'Ah.07g208480' => 'amhyb', 'Ah.09g237410' => 'amhyb', 'Ah.14g089460' => 'amhyb', 'AL1G41790' => 'aly', 'AL1G49050' => 'aly', 'AL1G53810' => 'aly', 'AL1G61400' => 'aly', 'AL4G18580' => 'aly', 'AL5G12510' => 'aly', 'AL5G12540' => 'aly', 'AL6G43230' => 'aly', 'AL7G10370' => 'aly', 'AL7G19250' => 'aly', 'AL8G12240' => 'aly', 'AL8G18540' => 'aly', 'Aqoxy1G02409' => 'aox', 'Aqoxy2G03993' => 'aox', 'Aqoxy3G03357' => 'aox', 'Aqoxy4G00785' => 'aox', 'Aqoxy5G02598' => 'aox', 'Aqoxy6G00132' => 'aox', 'Aqoxy7G01776' => 'aox', 'Aqoxy7G02316' => 'aox', 'Aqoxy7G03973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.12AFKW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B8730' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27IQR1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3F75VG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3RE0GA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41TCQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.527VTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FIR39' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5W8UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DA38EV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ63HS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H1I32C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HC27T5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4M8AP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7N3CZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9UVDZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LS1NQA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT1D4B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SKC4TM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCFV76' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF9Q1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQWD9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1ZM88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WE07RT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YCK7VH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJE6Q6' => 'arhy', 'AT1G28240' => 'ath', 'AT1G34550' => 'ath', 'AT1G53040' => 'ath', 'AT2G02910' => 'ath', 'AT4G09630' => 'ath', 'AT4G38500' => 'ath', 'AT5G42660' => 'ath', 'AT5G46220' => 'ath', 'ATR0152G026' => 'atr', 'ATR0564G343' => 'atr', 'ATR0706G151' => 'atr', 'ATR0733G207' => 'atr', 'ATR0751G234' => 'atr', 'ATR0807G048' => 'atr', 'ATR1091G084' => 'atr', 'Atru.chr10.1229' => 'acertr', 'Atru.chr10.1230' => 'acertr', 'Atru.chr10.1874' => 'acertr', 'Atru.chr11.1808' => 'acertr', 'Atru.chr13.1795' => 'acertr', 'Atru.chr13.570' => 'acertr', 'Atru.chr2.2608' => 'acertr', 'Atru.chr2.2609' => 'acertr', 'Atru.chr5.3428' => 'acertr', 'Atru.chr8.1171' => 'acertr', 'AUR62004651' => 'cqu', 'AUR62008675' => 'cqu', 'AUR62010014' => 'cqu', 'AUR62013004' => 'cqu', 'AUR62014825' => 'cqu', 'AUR62015015' => 'cqu', 'AUR62015151' => 'cqu', 'AUR62017020' => 'cqu', 'AUR62019422' => 'cqu', 'AUR62023570' => 'cqu', 'AUR62025571' => 'cqu', 'AUR62029098' => 'cqu', 'AUR62033863' => 'cqu', 'AUR62034296' => 'cqu', 'AUR62040075' => 'cqu', 'BcaB02g07334' => 'bca', 'BcaB02g10575' => 'bca', 'BcaB03g12119' => 'bca', 'BcaB03g12120' => 'bca', 'BcaB03g13945' => 'bca', 'BcaB04g17123' => 'bca', 'BcaB04g17867' => 'bca', 'BcaB04g19839' => 'bca', 'BcaB07g30317' => 'bca', 'BcaB07g32432' => 'bca', 'BcaB07g33362' => 'bca', 'BcaB08g36611' => 'bca', 'BcaC01g00028' => 'bca', 'BcaC01g01356' => 'bca', 'BcaC01g02034' => 'bca', 'BcaC01g06051' => 'bca', 'BcaC03g16839' => 'bca', 'BcaC03g17176' => 'bca', 'BcaC05g26829' => 'bca', 'BcaC06g31490' => 'bca', 'BcaC06g35344' => 'bca', 'BcaC06g36570' => 'bca', 'BcaC07g37537' => 'bca', 'BcaC08g43491' => 'bca', 'BcaC08g43773' => 'bca', 'BcaNung00234' => 'bca', 'BcaNung01982' => 'bca', 'BcaNung03707' => 'bca', 'BcaNung06454' => 'bca', 'BolC2t10762H' => 'bol', 'BolC2t11191H' => 'bol', 'BolC3t14322H' => 'bol', 'BolC3t19747H' => 'bol', 'BolC3t21425H' => 'bol', 'BolC4t27800H' => 'bol', 'BolC5t31423H' => 'bol', 'BolC6t35951H' => 'bol', 'BolC6t36282H' => 'bol', 'BolC7t40678H' => 'bol', 'BolC7t40679H' => 'bol', 'BolC7t42222H' => 'bol', 'BolC7t43492H' => 'bol', 'BolC7t46785H' => 'bol', 'BolC8t47853H' => 'bol', 'BolC9t56805H' => 'bol', 'BraA02t08000Z' => 'bra', 'BraA02t08341Z' => 'bra', 'BraA03t10936Z' => 'bra', 'BraA03t15657Z' => 'bra', 'BraA04t18100Z' => 'bra', 'BraA05t20523Z' => 'bra', 'BraA06t23353Z' => 'bra', 'BraA06t27473Z' => 'bra', 'BraA06t27769Z' => 'bra', 'BraA07t28928Z' => 'bra', 'BraA08t32236Z' => 'bra', 'BraA08t32841Z' => 'bra', 'BraA08t34524Z' => 'bra', 'BraA09t38742Z' => 'bra', 'BraA09t39295Z' => 'bra', 'C02p47180' => 'bna', 'C02p50990' => 'bna', 'C03p19360' => 'bna', 'C03p74950' => 'bna', 'C03p91000' => 'bna', 'C04p63260' => 'bna', 'C05p27050' => 'bna', 'C06p08750' => 'bna', 'C06p11490' => 'bna', 'C07p02820' => 'bna', 'C07p17180' => 'bna', 'C07p29440' => 'bna', 'C07p63730' => 'bna', 'C09p39260' => 'bna', 'CAN.G1164.34' => 'can', 'CAN.G1164.39' => 'can', 'CAN.G1530.3' => 'can', 'CAN.G162.61' => 'can', 'CAN.G176.6' => 'can', 'CAN.G289.49' => 'can', 'CAN.G370.21' => 'can', 'CAN.G370.22' => 'can', 'CAN.G371.117' => 'can', 'CAN.G58.37' => 'can', 'CAN.G588.98' => 'can', 'CANSAT21G2266' => 'cansat', 'CANSAT25G2799' => 'cansat', 'CANSAT35G0862' => 'cansat', 'CANSAT35G1704' => 'cansat', 'CANSAT35G1760' => 'cansat', 'CANSAT56G3971' => 'cansat', 'CANSAT56G4116' => 'cansat', 'CANSAT80G1259' => 'cansat', 'CARHR027730' => 'chi', 'CARHR033880' => 'chi', 'CARHR043270' => 'chi', 'CARHR145330' => 'chi', 'CARHR145340' => 'chi', 'CARHR175570' => 'chi', 'CARHR181570' => 'chi', 'CARHR258470' => 'chi', 'CARHR260490' => 'chi', 'CARHR294220' => 'chi', 'Carub.0001s2668' => 'cru', 'Carub.0001s3257' => 'cru', 'Carub.0001s4220' => 'cru', 'Carub.0005s0179' => 'cru', 'Carub.0006s2807' => 'cru', 'Carub.0007s0039' => 'cru', 'Carub.0008s0169' => 'cru', 'Carub.0008s0636' => 'cru', 'Ca_00338_v3' => 'car', 'Ca_00542_v3' => 'car', 'Ca_01844_v3' => 'car', 'Ca_10611_v3' => 'car', 'Ca_13326_v3' => 'car', 'Ca_17944_v3' => 'car', 'Ca_18546_v3' => 'car', 'Ca_24219_v3' => 'car', 'Ca_29972_v3' => 'car', 'CBR_g3681' => 'cbr', 'CBR_g40021' => 'cbr', 'Cc01_g08140' => 'ccan', 'Cc02_g13410' => 'ccan', 'Cc02_g37480' => 'ccan', 'Cc05_g12030' => 'ccan', 'Cc09_g03370' => 'ccan', 'Cc09_g10300' => 'ccan', 'Cc10_g03530' => 'ccan', 'Cc10_g11380' => 'ccan', 'CDE01G0176' => 'cde', 'CDE02G0675' => 'cde', 'CDE02G0942' => 'cde', 'CDE02G1153' => 'cde', 'CDE02G4177' => 'cde', 'CDE04G2117' => 'cde', 'CDE04G2736' => 'cde', 'CDE08G1161' => 'cde', 'CDE09G1238' => 'cde', 'Cfa000467' => 'cfa', 'Cfa000947' => 'cfa', 'Cfa004969' => 'cfa', 'Cfa005284' => 'cfa', 'Cfa008993' => 'cfa', 'Cfa018187' => 'cfa', 'Cfa018454' => 'cfa', 'Cfa020585' => 'cfa', 'Ciclev10000424m.g' => 'ccl', 'Ciclev10003605m.g' => 'ccl', 'Ciclev10007828m.g' => 'ccl', 'Ciclev10014620m.g' => 'ccl', 'Ciclev10015169m.g' => 'ccl', 'Ciclev10018291m.g' => 'ccl', 'Ciclev10028256m.g' => 'ccl', 'Ciclev10033822m.g' => 'ccl', 'CiPaw.05G060300' => 'cil', 'CiPaw.05G085000' => 'cil', 'CiPaw.06G083700' => 'cil', 'CiPaw.06G120300' => 'cil', 'CiPaw.09G060500' => 'cil', 'CiPaw.09G123800' => 'cil', 'CiPaw.11G169700' => 'cil', 'CiPaw.12G118300' => 'cil', 'CiPaw.15G071000' => 'cil', 'CiPaw.15G081900' => 'cil', 'ClCG01G024610' => 'cla', 'ClCG03G006070' => 'cla', 'ClCG05G019250' => 'cla', 'ClCG09G009500' => 'cla', 'ClCG11G008200' => 'cla', 'ClCG11G018080' => 'cla', 'COL.COLO4_17373' => 'col', 'COL.COLO4_22994' => 'col', 'COL.COLO4_26389' => 'col', 'COL.COLO4_27170' => 'col', 'COL.COLO4_31074' => 'col', 'COL.COLO4_31465' => 'col', 'COL.COLO4_36438' => 'col', 'COL.COLO4_36439' => 'col', 'Cpa.g.c38781' => 'cpa', 'Cpa.g.sc128.12' => 'cpa', 'Cpa.g.sc166.7' => 'cpa', 'Cpa.g.sc166.8' => 'cpa', 'Cpa.g.sc20.111' => 'cpa', 'Cpa.g.sc27.31' => 'cpa', 'Cpa.g.sc64.36' => 'cpa', 'Cpa.g.sc64.37' => 'cpa', 'Cpa.g.sc66.49' => 'cpa', 'Cpa.g.sc80.64' => 'cpa', 'CsaV3_1G012320' => 'csa', 'CsaV3_2G008480' => 'csa', 'CsaV3_2G033450' => 'csa', 'CsaV3_3G044830' => 'csa', 'CsaV3_4G033710' => 'csa', 'CsaV3_6G051730' => 'csa', 'CsaV3_7G025350' => 'csa', 'CSS0001067' => 'camsi', 'CSS0005996' => 'camsi', 'CSS0006590' => 'camsi', 'CSS0009673' => 'camsi', 'CSS0010201' => 'camsi', 'CSS0010549' => 'camsi', 'CSS0011364' => 'camsi', 'CSS0014473' => 'camsi', 'CSS0014961' => 'camsi', 'CSS0020191' => 'camsi', 'CSS0021165' => 'camsi', 'CSS0022306' => 'camsi', 'CSS0030591' => 'camsi', 'CSS0030696' => 'camsi', 'CSS0032653' => 'camsi', 'CSS0037487' => 'camsi', 'CSS0041102' => 'camsi', 'CSS0041261' => 'camsi', 'CSS0046246' => 'camsi', 'CSS0049256' => 'camsi', 'DCAR_004075' => 'dca', 'DCAR_011538' => 'dca', 'DCAR_019553' => 'dca', 'DCAR_020952' => 'dca', 'DCAR_021739' => 'dca', 'DCAR_027407' => 'dca', 'DCAR_027913' => 'dca', 'DCAR_028066' => 'dca', 'Dinv05899' => 'din', 'Dinv07563' => 'din', 'Dinv08010' => 'din', 'Dinv14125' => 'din', 'Dinv20172' => 'din', 'Dinv30743' => 'din', 'Dinv31229' => 'din', 'Dinv34162' => 'din', 'Dinv36028' => 'din', 'Dinv39368' => 'din', 'Dinv40565' => 'din', 'Dinv41706' => 'din', 'Duzib052G0089' => 'dzi', 'Duzib116G0641' => 'dzi', 'Duzib132G0069' => 'dzi', 'Duzib132G1219' => 'dzi', 'Duzib147G0278' => 'dzi', 'Duzib160G0480' => 'dzi', 'Duzib170G0661' => 'dzi', 'Duzib177G0591' => 'dzi', 'Duzib187G1353' => 'dzi', 'Duzib192G0858' => 'dzi', 'Duzib192G0883' => 'dzi', 'Duzib213G0506' => 'dzi', 'Duzib235G0289' => 'dzi', 'Duzib251G0422' => 'dzi', 'ECA232G3898' => 'eca', 'ECA233G5950' => 'eca', 'ECA234G1699' => 'eca', 'ECA234G2421' => 'eca', 'ECA236G0426' => 'eca', 'ECA236G4331' => 'eca', 'ECA248G2573' => 'eca', 'EL10Ac1g00077' => 'bvu', 'EL10Ac1g01746' => 'bvu', 'EL10Ac2g03464' => 'bvu', 'EL10Ac4g08176' => 'bvu', 'EL10Ac7g17521' => 'bvu', 'EL10Ac8g20386' => 'bvu', 'EL10Ac9g21343' => 'bvu', 'EL10Ac9g22688' => 'bvu', 'Eucgr.B03434' => 'egr', 'Eucgr.D00618' => 'egr', 'Eucgr.E02395' => 'egr', 'Eucgr.F01129' => 'egr', 'Eucgr.F02622' => 'egr', 'Eucgr.F04207' => 'egr', 'FAN01G0570' => 'fan', 'FAN03G3351' => 'fan', 'FAN06G3702' => 'fan', 'FAN07G2149' => 'fan', 'FAN10G3758' => 'fan', 'FAN11G1170' => 'fan', 'FAN11G2050' => 'fan', 'FAN11G2724' => 'fan', 'FAN12G1700' => 'fan', 'FAN12G2028' => 'fan', 'FAN15G1160' => 'fan', 'FAN15G3063' => 'fan', 'FAN16G2540' => 'fan', 'FAN16G3077' => 'fan', 'FAN16G3624' => 'fan', 'FAN17G0221' => 'fan', 'FAN20G2492' => 'fan', 'FAN20G2905' => 'fan', 'FAN21G0548' => 'fan', 'FAN21G1300' => 'fan', 'FAN22G0077' => 'fan', 'FAN22G1315' => 'fan', 'FAN24G1280' => 'fan', 'FAN24G1445' => 'fan', 'FAN24G3527' => 'fan', 'FAN25G0464' => 'fan', 'FAN25G2885' => 'fan', 'FAN25G3270' => 'fan', 'FAN27G1101' => 'fan', 'FAN27G2846' => 'fan', 'FAN27G3524' => 'fan', 'FvH4_2g11770' => 'fve', 'FvH4_2g15630' => 'fve', 'FvH4_3g05570' => 'fve', 'FvH4_3g09110' => 'fve', 'FvH4_3g19940' => 'fve', 'FvH4_4g04821' => 'fve', 'FvH4_4g31480' => 'fve', 'FvH4_7g01740' => 'fve', 'Glyma.05G130400' => 'gma', 'Glyma.05G156400' => 'gma', 'Glyma.07G197000' => 'gma', 'Glyma.08G085151' => 'gma', 'Glyma.08G114500' => 'gma', 'Glyma.08G300400' => 'gma', 'Glyma.10G215800' => 'gma', 'Glyma.12G224400' => 'gma', 'Glyma.13G179300' => 'gma', 'Glyma.13G218151' => 'gma', 'Glyma.13G238800' => 'gma', 'Glyma.13G276900' => 'gma', 'Glyma.14G078200' => 'gma', 'Glyma.15G074500' => 'gma', 'Glyma.15G094100' => 'gma', 'Glyma.17G247200' => 'gma', 'Glyma.18G120100' => 'gma', 'Glyma.20G176000' => 'gma', 'Gohir.A01G063600' => 'ghi', 'Gohir.A01G170301' => 'ghi', 'Gohir.A02G060500' => 'ghi', 'Gohir.A05G133850' => 'ghi', 'Gohir.A05G161400' => 'ghi', 'Gohir.A06G012900' => 'ghi', 'Gohir.A06G035901' => 'ghi', 'Gohir.A06G127100' => 'ghi', 'Gohir.A06G210500' => 'ghi', 'Gohir.A08G008650' => 'ghi', 'Gohir.A09G072700' => 'ghi', 'Gohir.A09G088301' => 'ghi', 'Gohir.A10G040600' => 'ghi', 'Gohir.A12G036300' => 'ghi', 'Gohir.A12G143350' => 'ghi', 'Gohir.A12G165500' => 'ghi', 'Gohir.A13G145700' => 'ghi', 'Gohir.D01G050000' => 'ghi', 'Gohir.D01G051366' => 'ghi', 'Gohir.D01G161350' => 'ghi', 'Gohir.D02G065900' => 'ghi', 'Gohir.D05G164200' => 'ghi', 'Gohir.D05G355500' => 'ghi', 'Gohir.D06G010400' => 'ghi', 'Gohir.D06G111250' => 'ghi', 'Gohir.D06G132000' => 'ghi', 'Gohir.D06G210500' => 'ghi', 'Gohir.D07G165675' => 'ghi', 'Gohir.D08G062240' => 'ghi', 'Gohir.D08G086101' => 'ghi', 'Gohir.D08G138060' => 'ghi', 'Gohir.D09G072300' => 'ghi', 'Gohir.D10G041400' => 'ghi', 'Gohir.D11G191020' => 'ghi', 'Gohir.D11G212066' => 'ghi', 'Gohir.D12G036300' => 'ghi', 'Gohir.D12G168600' => 'ghi', 'Gohir.D13G150600' => 'ghi', 'Gorai.001G057300' => 'gra', 'Gorai.002G069900' => 'gra', 'Gorai.002G200000' => 'gra', 'Gorai.003G067600' => 'gra', 'Gorai.005G074800' => 'gra', 'Gorai.006G087300' => 'gra', 'Gorai.008G037500' => 'gra', 'Gorai.008G181400' => 'gra', 'Gorai.009G169400' => 'gra', 'Gorai.009G387900' => 'gra', 'Gorai.010G013300' => 'gra', 'Gorai.010G153800' => 'gra', 'Gorai.010G255800' => 'gra', 'Gorai.011G043700' => 'gra', 'Gorai.011G198900' => 'gra', 'Gorai.013G168400' => 'gra', 'GSVIVG01005212001' => 'vvi', 'GSVIVG01006163001' => 'vvi', 'GSVIVG01009625001' => 'vvi', 'GSVIVG01014338001' => 'vvi', 'GSVIVG01020005001' => 'vvi', 'GSVIVG01021450001' => 'vvi', 'GSVIVG01023975001' => 'vvi', 'GSVIVG01034490001' => 'vvi', 'HanXRQChr04g0112071' => 'han', 'HanXRQChr05g0131151' => 'han', 'HanXRQChr09g0262371' => 'han', 'HanXRQChr09g0268401' => 'han', 'HanXRQChr10g0279241' => 'han', 'HanXRQChr10g0297961' => 'han', 'HanXRQChr11g0326231' => 'han', 'HanXRQChr11g0328471' => 'han', 'HanXRQChr16g0507941' => 'han', 'HanXRQChr17g0560211' => 'han', 'Haze_02108' => 'cav', 'Haze_02428' => 'cav', 'Haze_05593' => 'cav', 'Haze_06448' => 'cav', 'Haze_09427' => 'cav', 'Haze_12022' => 'cav', 'Haze_17612' => 'cav', 'Haze_17928' => 'cav', 'Hma1.2p1_0032F.1_g019250' => 'hma', 'Hma1.2p1_0163F.1_g072690' => 'hma', 'Hma1.2p1_0265F.1_g106710' => 'hma', 'Hma1.2p1_0286F.1_g113970' => 'hma', 'Hma1.2p1_0363F.1_g136640' => 'hma', 'Hma1.2p1_0584F.1_g183470' => 'hma', 'Hma1.2p1_0885F.1_g232570' => 'hma', 'HPP92_006022' => 'vpl', 'HPP92_007320' => 'vpl', 'HPP92_011521' => 'vpl', 'HPP92_019387' => 'vpl', 'HPP92_024038' => 'vpl', 'Hund05891' => 'sun', 'Hund06450' => 'sun', 'Hund12053' => 'sun', 'Hund16800' => 'sun', 'Hund21222' => 'sun', 'Hund22896' => 'sun', 'Hund23746' => 'sun', 'Hund27083' => 'sun', 'Lalb_Chr02g0141831' => 'lal', 'Lalb_Chr02g0141841' => 'lal', 'Lalb_Chr05g0220411' => 'lal', 'Lalb_Chr06g0162081' => 'lal', 'Lalb_Chr09g0327651' => 'lal', 'Lalb_Chr13g0295051' => 'lal', 'Lalb_Chr15g0086801' => 'lal', 'Lalb_Chr16g0383781' => 'lal', 'Lalb_Chr16g0383791' => 'lal', 'Lalb_Chr18g0055441' => 'lal', 'Lalb_Chr18g0059611' => 'lal', 'Lalb_Chr20g0109661' => 'lal', 'Lalb_Chr20g0109831' => 'lal', 'Lalb_Chr20g0121871' => 'lal', 'Lalb_Chr22g0355361' => 'lal', 'Lalb_Chr25g0286371' => 'lal', 'Lj1A1187G43' => 'lonja', 'Lj1A1205T50' => 'lonja', 'Lj1A800G33' => 'lonja', 'Lj1C1187T7' => 'lonja', 'Lj1C843T11' => 'lonja', 'Lj1g0010940' => 'lja', 'Lj2A288T69' => 'lonja', 'Lj3g0024276' => 'lja', 'Lj4A47T76' => 'lonja', 'Lj4g0005805' => 'lja', 'Lj4g0006097' => 'lja', 'Lj4g0008528' => 'lja', 'Lj4g0024907' => 'lja', 'Lj5g0012472' => 'lja', 'Lj5g0018648' => 'lja', 'Lj6C789G1' => 'lonja', 'Lj6g0004000' => 'lja', 'Lj7A292G67' => 'lonja', 'Lj7A292T64' => 'lonja', 'Lj9A400T58' => 'lonja', 'Lsat_1_v5_gn_1_126181' => 'lsa', 'Lsat_1_v5_gn_4_123041' => 'lsa', 'Lsat_1_v5_gn_4_133620' => 'lsa', 'Lsat_1_v5_gn_4_53221' => 'lsa', 'Lsat_1_v5_gn_4_71961' => 'lsa', 'Lsat_1_v5_gn_7_105241' => 'lsa', 'Lsat_1_v5_gn_7_21361' => 'lsa', 'Lsat_1_v5_gn_7_28860' => 'lsa', 'Lsat_1_v5_gn_7_31260' => 'lsa', 'Lsat_1_v5_gn_8_52801' => 'lsa', 'Manes.02G191400' => 'mes', 'Manes.03G110100' => 'mes', 'Manes.04G071100' => 'mes', 'Manes.05G100500' => 'mes', 'Manes.05G164700' => 'mes', 'Manes.15G087000' => 'mes', 'Manes.15G121500' => 'mes', 'Manes.16G028300' => 'mes', 'Manes.17G046100' => 'mes', 'Manes.17G069800' => 'mes', 'Manes.18G100500' => 'mes', 'Mapoly0002s0109' => 'mpo', 'Mapoly0024s0007' => 'mpo', 'Mapoly0089s0032' => 'mpo', 'MBI04_g42241_MAGBIO' => 'mbi', 'MBI05_g11988_MAGBIO' => 'mbi', 'MBI05_g35452_MAGBIO' => 'mbi', 'MBI07_g30179_MAGBIO' => 'mbi', 'MBI07_g35859_MAGBIO' => 'mbi', 'MBI07_g35860_MAGBIO' => 'mbi', 'MBI07_g37166_MAGBIO' => 'mbi', 'MBI08_g18172_MAGBIO' => 'mbi', 'MBI09_g08441_MAGBIO' => 'mbi', 'MBI13_g01676_MAGBIO' => 'mbi', 'MBI14_g42955_MAGBIO' => 'mbi', 'MBI16_g13161_MAGBIO' => 'mbi', 'MBI17_g27204_MAGBIO' => 'mbi', 'MBI19_g21595_MAGBIO' => 'mbi', 'MD00G1148400' => 'mdo', 'MD02G1301200' => 'mdo', 'MD03G1227800' => 'mdo', 'MD05G1041100' => 'mdo', 'MD05G1124800' => 'mdo', 'MD05G1284000' => 'mdo', 'MD05G1338800' => 'mdo', 'MD05G1338900' => 'mdo', 'MD07G1022800' => 'mdo', 'MD10G1047500' => 'mdo', 'MD10G1127500' => 'mdo', 'MD10G1262300' => 'mdo', 'MD10G1293800' => 'mdo', 'MD16G1074300' => 'mdo', 'Medtr1g021670' => 'mtr', 'Medtr1g096320' => 'mtr', 'Medtr2g013690' => 'mtr', 'Medtr2g019450' => 'mtr', 'Medtr2g085170' => 'mtr', 'Medtr4g088785' => 'mtr', 'Medtr8g055930' => 'mtr', 'Medtr8g085850' => 'mtr', 'MELO3C002605.2' => 'cme', 'MELO3C003891.2' => 'cme', 'MELO3C004012.2' => 'cme', 'MELO3C007134.2' => 'cme', 'MELO3C008118.2' => 'cme', 'MELO3C016700.2' => 'cme', 'MELO3C024127.2' => 'cme', 'MELO3C033361.2' => 'cme', 'MELO3C033362.2' => 'cme', 'Migut.C00430' => 'egut', 'Migut.C01246' => 'egut', 'Migut.E00101' => 'egut', 'Migut.H01486' => 'egut', 'Migut.H01939' => 'egut', 'Migut.K00360' => 'egut', 'Migut.M00910' => 'egut', 'Migut.M01139' => 'egut', 'Migut.N02677' => 'egut', 'MSTRG.13252' => 'ama', 'MSTRG.14701' => 'ama', 'MSTRG.1521' => 'ama', 'MSTRG.15884' => 'ama', 'MSTRG.16242' => 'ama', 'MSTRG.22285' => 'ama', 'MSTRG.22444' => 'ama', 'MSTRG.2349' => 'ama', 'MSTRG.26308' => 'ama', 'MSTRG.28296' => 'ama', 'MSTRG.9895' => 'ama', 'Nitab4.5_0000110g0060' => 'nta', 'Nitab4.5_0000420g0130' => 'nta', 'Nitab4.5_0000422g0030' => 'nta', 'Nitab4.5_0000560g0180' => 'nta', 'Nitab4.5_0000703g0100' => 'nta', 'Nitab4.5_0000786g0200' => 'nta', 'Nitab4.5_0001336g0020' => 'nta', 'Nitab4.5_0001796g0030' => 'nta', 'Nitab4.5_0003348g0060' => 'nta', 'Nitab4.5_0003698g0040' => 'nta', 'Nitab4.5_0003942g0090' => 'nta', 'Nitab4.5_0004775g0070' => 'nta', 'Nitab4.5_0004864g0030' => 'nta', 'Nitab4.5_0005615g0020' => 'nta', 'Nitab4.5_0009288g0030' => 'nta', 'Nitab4.5_0009341g0010' => 'nta', 'Nitab4.5_0009535g0010' => 'nta', 'Nn1g03995' => 'nnu', 'Nn1g04100' => 'nnu', 'Nn1g06530' => 'nnu', 'Nn3g16404' => 'nnu', 'Nn3g17212' => 'nnu', 'Nn3g20776' => 'nnu', 'Nn3g21923' => 'nnu', 'Nn5g27737' => 'nnu', 'Nn5g29461' => 'nnu', 'Nn7g38355' => 'nnu', 'Nn8g39873' => 'nnu', 'Oeu000548.2' => 'oeu', 'Oeu004672.1' => 'oeu', 'Oeu015605.2' => 'oeu', 'Oeu016092.1' => 'oeu', 'Oeu017879.3' => 'oeu', 'Oeu024910.1' => 'oeu', 'Oeu028965.1' => 'oeu', 'Oeu031269.1' => 'oeu', 'Oeu031270.1' => 'oeu', 'Oeu032535.1' => 'oeu', 'Oeu034151.1' => 'oeu', 'Oeu034152.1' => 'oeu', 'Oeu034588.2' => 'oeu', 'Oeu050846.1' => 'oeu', 'Oeu050849.2' => 'oeu', 'Oeu051063.2' => 'oeu', 'Oeu052368.1' => 'oeu', 'Oeu052370.1' => 'oeu', 'Os01g0210400' => 'osa', 'Os01g0304300' => 'osa', 'Os01g0749100' => 'osa', 'Os02g0745800' => 'osa', 'Os03g0769050' => 'osa', 'Os05g0531500' => 'osa', 'Os06g0724300' => 'osa', 'Os11g0198100' => 'osa', 'Peaxi162Scf00069g01425' => 'pax', 'Peaxi162Scf00280g00811' => 'pax', 'Peaxi162Scf00310g00615' => 'pax', 'Peaxi162Scf00362g00542' => 'pax', 'Peaxi162Scf00461g00310' => 'pax', 'Peaxi162Scf00530g00118' => 'pax', 'Peaxi162Scf00541g00057' => 'pax', 'Peaxi162Scf00661g00017' => 'pax', 'Peaxi162Scf00926g00027' => 'pax', 'Peaxi162Scf01064g00263' => 'pax', 'Peaxi162Scf01211g00135' => 'pax', 'PGR004G2336' => 'pgr', 'PGR042G0327' => 'pgr', 'PGR042G1957' => 'pgr', 'PGR042G2003' => 'pgr', 'PGR042G3929' => 'pgr', 'PGR083G1137' => 'pgr', 'PGR083G1364' => 'pgr', 'PGSC0003DMG400003381' => 'stu', 'PGSC0003DMG400003417' => 'stu', 'PGSC0003DMG400008981' => 'stu', 'PGSC0003DMG400012417' => 'stu', 'PGSC0003DMG400012823' => 'stu', 'PGSC0003DMG400016885' => 'stu', 'PGSC0003DMG400022812' => 'stu', 'PGSC0003DMG400029726' => 'stu', 'PGSC0003DMG401009243' => 'stu', 'PGSC0003DMG401031505' => 'stu', 'PGSC0003DMG402031505' => 'stu', 'Phvul.001G017600' => 'pvu', 'Phvul.002G193500' => 'pvu', 'Phvul.002G228900' => 'pvu', 'Phvul.002G236800' => 'pvu', 'Phvul.003G049500' => 'pvu', 'Phvul.005G072000' => 'pvu', 'Phvul.006G164800' => 'pvu', 'Phvul.006G185100' => 'pvu', 'Phvul.007G090000' => 'pvu', 'Potri.001G399800' => 'ptr', 'Potri.002G149900' => 'ptr', 'Potri.004G044100' => 'ptr', 'Potri.004G177600' => 'ptr', 'Potri.009G138000' => 'ptr', 'Potri.010G094000' => 'ptr', 'Potri.011G053000' => 'ptr', 'Potri.011G119300' => 'ptr', 'Potri.013G113700' => 'ptr', 'Potri.018G107800' => 'ptr', 'Potri.019G084100' => 'ptr', 'Pp3c14_23720' => 'ppa', 'Pp3c16_6340' => 'ppa', 'Pp3c23_13420' => 'ppa', 'Pp3c24_2740' => 'ppa', 'Pp3c25_860' => 'ppa', 'Pp3c8_21750' => 'ppa', 'Prupe.1G273000' => 'ppe', 'Prupe.1G273700' => 'ppe', 'Prupe.1G274100' => 'ppe', 'Prupe.2G023300' => 'ppe', 'Prupe.4G048000' => 'ppe', 'Prupe.4G080400' => 'ppe', 'Prupe.4G181200' => 'ppe', 'Prupe.8G056900' => 'ppe', 'Prupe.8G168700' => 'ppe', 'Psat1g189080' => 'psa', 'Psat1g204760' => 'psa', 'Psat4g175560' => 'psa', 'Psat4g177720' => 'psa', 'Psat5g244240' => 'psa', 'Psat6g010720' => 'psa', 'Psat6g187200' => 'psa', 'Psat7g072040' => 'psa', 'PSO017G3501' => 'pso', 'PSO063G2148' => 'pso', 'PSO063G5608' => 'pso', 'PSO210G6392' => 'pso', 'PSO541G2319' => 'pso', 'PSO541G2836' => 'pso', 'PSO541G4012' => 'pso', 'PSO541G6253' => 'pso', 'PSO675G0580' => 'pso', 'PSO675G0856' => 'pso', 'PSO675G5635' => 'pso', 'PSO675G9157' => 'pso', 'PSO832G1660' => 'pso', 'PSO832G1969' => 'pso', 'QL02p007186' => 'qlo', 'QL02p033904' => 'qlo', 'QL03p064391' => 'qlo', 'QL05p040593' => 'qlo', 'QL05p058242' => 'qlo', 'QL08p021825' => 'qlo', 'QL11p004981' => 'qlo', 'RcHm_v2.0_Chr1g0318301' => 'rch', 'RcHm_v2.0_Chr4g0418501' => 'rch', 'RcHm_v2.0_Chr4g0439971' => 'rch', 'RcHm_v2.0_Chr5g0008541' => 'rch', 'RcHm_v2.0_Chr5g0014101' => 'rch', 'RcHm_v2.0_Chr5g0014131' => 'rch', 'RcHm_v2.0_Chr5g0033621' => 'rch', 'RcHm_v2.0_Chr6g0272041' => 'rch', 'RcHm_v2.0_Chr6g0278831' => 'rch', 'Rhsim02G0130400' => 'rsi', 'Rhsim02G0171100' => 'rsi', 'Rhsim05G0053000' => 'rsi', 'Rhsim05G0053100' => 'rsi', 'Rhsim06G0096500' => 'rsi', 'Rhsim06G0096600' => 'rsi', 'Rhsim06G0199100' => 'rsi', 'Rhsim12G0062300' => 'rsi', 'Rhsim12G0062800' => 'rsi', 'Sabra02G0118600' => 'sbr', 'Sabra04G0027300' => 'sbr', 'Sabra04G0119500' => 'sbr', 'Sabra08G0112500' => 'sbr', 'Sabra11G0036800' => 'sbr', 'Sabra11G0103800' => 'sbr', 'Sabra13G0096300' => 'sbr', 'Sabra16G0262300' => 'sbr', 'Sabra18G0091700' => 'sbr', 'Sabra19G0095400' => 'sbr', 'SalBow6G3080' => 'sbo', 'SalBow7G1157' => 'sbo', 'SalBow7G2123' => 'sbo', 'SalBow7G2285' => 'sbo', 'SalBow7G3537' => 'sbo', 'SalBow8G2947' => 'sbo', 'SalBow8G4463' => 'sbo', 'SalBow8G5466' => 'sbo', 'Sc01g0001750' => 'sci', 'Sc02g0006640' => 'sci', 'Sc02g0006670' => 'sci', 'Sc04g0008220' => 'sci', 'Sc05g0006190' => 'sci', 'Sc08g0002760' => 'sci', 'Sc17g0006170' => 'sci', 'Sc22g0002050' => 'sci', 'Sc23g0001190' => 'sci', 'Sc24g0000980' => 'sci', 'Sed0006245' => 'sed', 'Sed0007543' => 'sed', 'Sed0009411' => 'sed', 'Sed0010765' => 'sed', 'Sed0012944' => 'sed', 'Sed0014682' => 'sed', 'Sed0016174' => 'sed', 'Sed0016796' => 'sed', 'Sed0020317' => 'sed', 'Sed0021467' => 'sed', 'SEGI_01316' => 'sgi', 'SEGI_03374' => 'sgi', 'SEGI_16265' => 'sgi', 'SEGI_18569' => 'sgi', 'SEGI_20351' => 'sgi', 'SEGI_26395' => 'sgi', 'SEGI_29469' => 'sgi', 'SEGI_34771' => 'sgi', 'SEGI_36769' => 'sgi', 'SEGI_37139' => 'sgi', 'SGA_v2.0_scaffold100G29687' => 'sas', 'SGA_v2.0_scaffold118G32472' => 'sas', 'SGA_v2.0_scaffold14G07051' => 'sas', 'SGA_v2.0_scaffold183G39845' => 'sas', 'SGA_v2.0_scaffold1G00174' => 'sas', 'SGA_v2.0_scaffold22G09714' => 'sas', 'SGA_v2.0_scaffold333G48992' => 'sas', 'SGA_v2.0_scaffold46G17491' => 'sas', 'SGA_v2.0_scaffold49G18294' => 'sas', 'SGA_v2.0_scaffold63G21658' => 'sas', 'SHI01741' => 'shi', 'SHI05771' => 'shi', 'SHI18077' => 'shi', 'SHI20525' => 'shi', 'SHI20527' => 'shi', 'SHI20528' => 'shi', 'SMO172G0185' => 'smo', 'SMO198G0020' => 'smo', 'SMO351G0006' => 'smo', 'SMO356G0118' => 'smo', 'SMO358G0296' => 'smo', 'SMO367G0079' => 'smo', 'SMO367G1277' => 'smo', 'Solyc01g014220.3' => 'sly', 'Solyc01g111770.2' => 'sly', 'Solyc02g078180.3' => 'sly', 'Solyc03g006430.3' => 'sly', 'Solyc03g006456.1' => 'sly', 'Solyc03g079860.2' => 'sly', 'Solyc04g079770.3' => 'sly', 'Solyc05g007430.4' => 'sly', 'Solyc07g063150.3' => 'sly', 'Solyc08g016620.3' => 'sly', 'Solyc09g057590.3' => 'sly', 'Solyc09g057600.1' => 'sly', 'Solyc10g009050.3' => 'sly', 'Solyc11g017420.2' => 'sly', 'Sopen01g053810' => 'spe', 'Sopen02g023040' => 'spe', 'Sopen03g002440' => 'spe', 'Sopen04g033350' => 'spe', 'Sopen05g003310' => 'spe', 'Sopen07g004050' => 'spe', 'Sopen07g031340' => 'spe', 'Sopen08g006990' => 'spe', 'Sopen10g004830' => 'spe', 'Sopen11g009370' => 'spe', 'Sp1g24450' => 'spa', 'Sp1g29670' => 'spa', 'Sp1g39600' => 'spa', 'Sp2g11080' => 'spa', 'Sp2g13970' => 'spa', 'Sp4g16130' => 'spa', 'Sp6g13080' => 'spa', 'Sp7g37270' => 'spa', 'TAR371G0065' => 'tar', 'TAR376G0340' => 'tar', 'TAR376G0435' => 'tar', 'TAR381G0002' => 'tar', 'TAR381G1236' => 'tar', 'TAR624G0055' => 'tar', 'TAR624G0324' => 'tar', 'TAR624G0696' => 'tar', 'TAR624G0906' => 'tar', 'TAR625G0107' => 'tar', 'TAR626G0015' => 'tar', 'TAR626G1356' => 'tar', 'TAR627G0888' => 'tar', 'TAR628G0399' => 'tar', 'TAR628G1327' => 'tar', 'TAR629G2831' => 'tar', 'TAR629G2874' => 'tar', 'TAR633G1432' => 'tar', 'TAR633G2771' => 'tar', 'THA.LOC104803394' => 'tha', 'THA.LOC104805153' => 'tha', 'THA.LOC104806784' => 'tha', 'THA.LOC104810473' => 'tha', 'THA.LOC104813100' => 'tha', 'THA.LOC104814215' => 'tha', 'THA.LOC104815554' => 'tha', 'THA.LOC104820544' => 'tha', 'THA.LOC104824754' => 'tha', 'THA.LOC104827717' => 'tha', 'Thecc.02G031400' => 'tca', 'Thecc.02G055900' => 'tca', 'Thecc.02G350800' => 'tca', 'Thecc.06G150900' => 'tca', 'Thecc.06G186600' => 'tca', 'Thecc.07G089600' => 'tca', 'Thecc.08G020400' => 'tca', 'Thecc.08G182100' => 'tca', 'Thhalv10000873m.g' => 'esa', 'Thhalv10004185m.g' => 'esa', 'Thhalv10006981m.g' => 'esa', 'Thhalv10007204m.g' => 'esa', 'Thhalv10011374m.g' => 'esa', 'Thhalv10013482m.g' => 'esa', 'Thhalv10017801m.g' => 'esa', 'Thhalv10024983m.g' => 'esa', 'TPR.G12072' => 'tpr', 'TPR.G15769' => 'tpr', 'TPR.G16504' => 'tpr', 'TPR.G16506' => 'tpr', 'TPR.G24345' => 'tpr', 'TPR.G26666' => 'tpr', 'TPR.G27320' => 'tpr', 'TPR.G31819' => 'tpr', 'TPR.G38879' => 'tpr', 'TPR.G39015' => 'tpr', 'TPR.G8819' => 'tpr', 'TWI09G0924' => 'twi', 'TWI12G0811' => 'twi', 'TWI12G1294' => 'twi', 'TWI31G0150' => 'twi', 'TWI36G1262' => 'twi', 'TWI38G1287' => 'twi', 'TWI38G1633' => 'twi', 'TWI38G1982' => 'twi', 'TWI39G0116' => 'twi', 'TWI60G1011' => 'twi', 'TWI63G0171' => 'twi', 'TWI73G0839' => 'twi', 'TWI79G1511' => 'twi', 'unitig_0.g915' => 'ugi', 'unitig_0.g916' => 'ugi', 'unitig_21.g20219' => 'ugi', 'unitig_21.g20416' => 'ugi', 'unitig_578.g16132' => 'ugi', 'unitig_578.g16718' => 'ugi', 'unitig_62.g23481' => 'ugi', 'unitig_744.g24535' => 'ugi', 'unitig_749.g13525' => 'ugi', 'vmacro01248' => 'vma', 'vmacro02290' => 'vma', 'vmacro10946' => 'vma', 'vmacro11865' => 'vma', 'vmacro12493' => 'vma', 'vmacro17322' => 'vma', 'vmacro21599' => 'vma', 'vmacro23041' => 'vma', 'VMungo0251G0004' => 'vmu', 'VMungo0251G2639' => 'vmu', 'VMungo0251G2967' => 'vmu', 'VMungo0540G0864' => 'vmu', 'VMungo0540G1569' => 'vmu', 'VMungo0647G0317' => 'vmu', 'VMungo0720G1373' => 'vmu', 'VMungo0720G1508' => 'vmu', 'VMungo1080G0485' => 'vmu', 'VMungo1215G3177' => 'vmu', 'Zm00001eb112600' => 'zma', 'Zm00001eb120220' => 'zma', 'Zm00001eb153240' => 'zma', 'Zm00001eb168880' => 'zma', 'Zm00001eb213920' => 'zma', 'Zm00001eb228280' => 'zma', 'Zm00001eb254580' => 'zma', 'Zm00001eb272180' => 'zma', 'Zm00001eb293190' => 'zma', 'Zm00001eb322930' => 'zma', 'Zm00001eb353360' => 'zma', 'Zm00001eb353390' => 'zma', 'Zm00001eb353430' => 'zma', 'Zm00001eb353440' => 'zma', 'Zm00001eb353780' => 'zma' ) $gf_id = 'HOM05D000499' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000499' ) $data_identifier = 'HOM05D000499' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 29, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 12, 'amhyb' => (int) 8, 'aly' => (int) 12, 'aox' => (int) 9, 'arhy' => (int) 26, 'ath' => (int) 8, 'atr' => (int) 7, 'acertr' => (int) 10, 'cqu' => (int) 15, 'bca' => (int) 29, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 11, 'cansat' => (int) 8, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 9, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 8, 'cpa' => (int) 10, 'csa' => (int) 7, 'camsi' => (int) 20, 'dca' => (int) 8, 'din' => (int) 12, 'dzi' => (int) 14, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 6, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 38, 'gra' => (int) 16, 'vvi' => (int) 8, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 5, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 11, 'lja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 11, 'mpo' => (int) 3, 'mbi' => (int) 14, 'mdo' => (int) 14, 'mtr' => (int) 8, 'cme' => (int) 9, 'egut' => (int) 9, 'ama' => (int) 11, 'nta' => (int) 17, 'nnu' => (int) 11, 'oeu' => (int) 18, 'osa' => (int) 8, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 6, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 9, 'rsi' => (int) 9, 'sbr' => (int) 10, 'sbo' => (int) 8, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 10, 'sas' => (int) 10, 'shi' => (int) 6, 'smo' => (int) 7, 'sly' => (int) 14, 'spe' => (int) 10, 'spa' => (int) 8, 'tar' => (int) 19, 'tha' => (int) 10, 'tca' => (int) 8, 'esa' => (int) 8, 'tpr' => (int) 11, 'twi' => (int) 13, 'ugi' => (int) 9, 'vma' => (int) 8, 'vmu' => (int) 10, 'zma' => (int) 15 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb353780' $species_info = array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ) $local_species = 'ccan' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000499', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1066', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p29780' => 'bna', 'A02p33180' => 'bna', 'A03p16470' => 'bna', 'A03p66010' => 'bna', 'A04p25970' => 'bna', 'A06p01270' => 'bna', 'A06p46080' => 'bna', 'A07p11400' => 'bna', 'A08p01840' => 'bna', 'A08p08230' => 'bna', 'A08p25740' => 'bna', 'A09p32070' => 'bna', 'A09p37830' => 'bna', 'A09p42840' => 'bna', 'A09p42850' => 'bna', 'Aa31LG10G2060' => 'aar', 'Aa31LG2G7410' => 'aar', 'Aa31LG6G10200' => 'aar', 'Aa31LG6G16680' => 'aar', 'Aa31LG6G8470' => 'aar', 'Aa31LG9G12730' => 'aar', 'Aa31LG9G13680' => 'aar', 'Aa31LG9G14920' => 'aar', 'Aa31LG9G6650' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4977' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5467' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3254' => 'aag', 'Actinidia02578' => 'ach', 'Actinidia07693' => 'ach', 'Actinidia08413' => 'ach', 'Actinidia08414' => 'ach', 'Actinidia15289' => 'ach', 'Actinidia19871' => 'ach', 'Actinidia21475' => 'ach', 'Actinidia22576' => 'ach', 'Actinidia28327' => 'ach', 'Actinidia32491' => 'ach', 'Actinidia39463' => 'ach', 'Actinidia39571' => 'ach', 'Ah.01g013750' => 'amhyb', 'Ah.01g023210' => 'amhyb', 'Ah.04g164850' => 'amhyb', 'Ah.05g178060' => 'amhyb', 'Ah.07g204270' => 'amhyb', 'Ah.07g208480' => 'amhyb', 'Ah.09g237410' => 'amhyb', 'Ah.14g089460' => 'amhyb', 'AL1G41790' => 'aly', 'AL1G49050' => 'aly', 'AL1G53810' => 'aly', 'AL1G61400' => 'aly', 'AL4G18580' => 'aly', 'AL5G12510' => 'aly', 'AL5G12540' => 'aly', 'AL6G43230' => 'aly', 'AL7G10370' => 'aly', 'AL7G19250' => 'aly', 'AL8G12240' => 'aly', 'AL8G18540' => 'aly', 'Aqoxy1G02409' => 'aox', 'Aqoxy2G03993' => 'aox', 'Aqoxy3G03357' => 'aox', 'Aqoxy4G00785' => 'aox', 'Aqoxy5G02598' => 'aox', 'Aqoxy6G00132' => 'aox', 'Aqoxy7G01776' => 'aox', 'Aqoxy7G02316' => 'aox', 'Aqoxy7G03973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.12AFKW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B8730' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27IQR1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3F75VG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3RE0GA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41TCQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.527VTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FIR39' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5W8UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DA38EV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ63HS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H1I32C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HC27T5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4M8AP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7N3CZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9UVDZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LS1NQA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT1D4B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SKC4TM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCFV76' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF9Q1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQWD9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1ZM88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WE07RT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YCK7VH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJE6Q6' => 'arhy', 'AT1G28240' => 'ath', 'AT1G34550' => 'ath', 'AT1G53040' => 'ath', 'AT2G02910' => 'ath', 'AT4G09630' => 'ath', 'AT4G38500' => 'ath', 'AT5G42660' => 'ath', 'AT5G46220' => 'ath', 'ATR0152G026' => 'atr', 'ATR0564G343' => 'atr', 'ATR0706G151' => 'atr', 'ATR0733G207' => 'atr', 'ATR0751G234' => 'atr', 'ATR0807G048' => 'atr', 'ATR1091G084' => 'atr', 'Atru.chr10.1229' => 'acertr', 'Atru.chr10.1230' => 'acertr', 'Atru.chr10.1874' => 'acertr', 'Atru.chr11.1808' => 'acertr', 'Atru.chr13.1795' => 'acertr', 'Atru.chr13.570' => 'acertr', 'Atru.chr2.2608' => 'acertr', 'Atru.chr2.2609' => 'acertr', 'Atru.chr5.3428' => 'acertr', 'Atru.chr8.1171' => 'acertr', 'AUR62004651' => 'cqu', 'AUR62008675' => 'cqu', 'AUR62010014' => 'cqu', 'AUR62013004' => 'cqu', 'AUR62014825' => 'cqu', 'AUR62015015' => 'cqu', 'AUR62015151' => 'cqu', 'AUR62017020' => 'cqu', 'AUR62019422' => 'cqu', 'AUR62023570' => 'cqu', 'AUR62025571' => 'cqu', 'AUR62029098' => 'cqu', 'AUR62033863' => 'cqu', 'AUR62034296' => 'cqu', 'AUR62040075' => 'cqu', 'BcaB02g07334' => 'bca', 'BcaB02g10575' => 'bca', 'BcaB03g12119' => 'bca', 'BcaB03g12120' => 'bca', 'BcaB03g13945' => 'bca', 'BcaB04g17123' => 'bca', 'BcaB04g17867' => 'bca', 'BcaB04g19839' => 'bca', 'BcaB07g30317' => 'bca', 'BcaB07g32432' => 'bca', 'BcaB07g33362' => 'bca', 'BcaB08g36611' => 'bca', 'BcaC01g00028' => 'bca', 'BcaC01g01356' => 'bca', 'BcaC01g02034' => 'bca', 'BcaC01g06051' => 'bca', 'BcaC03g16839' => 'bca', 'BcaC03g17176' => 'bca', 'BcaC05g26829' => 'bca', 'BcaC06g31490' => 'bca', 'BcaC06g35344' => 'bca', 'BcaC06g36570' => 'bca', 'BcaC07g37537' => 'bca', 'BcaC08g43491' => 'bca', 'BcaC08g43773' => 'bca', 'BcaNung00234' => 'bca', 'BcaNung01982' => 'bca', 'BcaNung03707' => 'bca', 'BcaNung06454' => 'bca', 'BolC2t10762H' => 'bol', 'BolC2t11191H' => 'bol', 'BolC3t14322H' => 'bol', 'BolC3t19747H' => 'bol', 'BolC3t21425H' => 'bol', 'BolC4t27800H' => 'bol', 'BolC5t31423H' => 'bol', 'BolC6t35951H' => 'bol', 'BolC6t36282H' => 'bol', 'BolC7t40678H' => 'bol', 'BolC7t40679H' => 'bol', 'BolC7t42222H' => 'bol', 'BolC7t43492H' => 'bol', 'BolC7t46785H' => 'bol', 'BolC8t47853H' => 'bol', 'BolC9t56805H' => 'bol', 'BraA02t08000Z' => 'bra', 'BraA02t08341Z' => 'bra', 'BraA03t10936Z' => 'bra', 'BraA03t15657Z' => 'bra', 'BraA04t18100Z' => 'bra', 'BraA05t20523Z' => 'bra', 'BraA06t23353Z' => 'bra', 'BraA06t27473Z' => 'bra', 'BraA06t27769Z' => 'bra', 'BraA07t28928Z' => 'bra', 'BraA08t32236Z' => 'bra', 'BraA08t32841Z' => 'bra', 'BraA08t34524Z' => 'bra', 'BraA09t38742Z' => 'bra', 'BraA09t39295Z' => 'bra', 'C02p47180' => 'bna', 'C02p50990' => 'bna', 'C03p19360' => 'bna', 'C03p74950' => 'bna', 'C03p91000' => 'bna', 'C04p63260' => 'bna', 'C05p27050' => 'bna', 'C06p08750' => 'bna', 'C06p11490' => 'bna', 'C07p02820' => 'bna', 'C07p17180' => 'bna', 'C07p29440' => 'bna', 'C07p63730' => 'bna', 'C09p39260' => 'bna', 'CAN.G1164.34' => 'can', 'CAN.G1164.39' => 'can', 'CAN.G1530.3' => 'can', 'CAN.G162.61' => 'can', 'CAN.G176.6' => 'can', 'CAN.G289.49' => 'can', 'CAN.G370.21' => 'can', 'CAN.G370.22' => 'can', 'CAN.G371.117' => 'can', 'CAN.G58.37' => 'can', 'CAN.G588.98' => 'can', 'CANSAT21G2266' => 'cansat', 'CANSAT25G2799' => 'cansat', 'CANSAT35G0862' => 'cansat', 'CANSAT35G1704' => 'cansat', 'CANSAT35G1760' => 'cansat', 'CANSAT56G3971' => 'cansat', 'CANSAT56G4116' => 'cansat', 'CANSAT80G1259' => 'cansat', 'CARHR027730' => 'chi', 'CARHR033880' => 'chi', 'CARHR043270' => 'chi', 'CARHR145330' => 'chi', 'CARHR145340' => 'chi', 'CARHR175570' => 'chi', 'CARHR181570' => 'chi', 'CARHR258470' => 'chi', 'CARHR260490' => 'chi', 'CARHR294220' => 'chi', 'Carub.0001s2668' => 'cru', 'Carub.0001s3257' => 'cru', 'Carub.0001s4220' => 'cru', 'Carub.0005s0179' => 'cru', 'Carub.0006s2807' => 'cru', 'Carub.0007s0039' => 'cru', 'Carub.0008s0169' => 'cru', 'Carub.0008s0636' => 'cru', 'Ca_00338_v3' => 'car', 'Ca_00542_v3' => 'car', 'Ca_01844_v3' => 'car', 'Ca_10611_v3' => 'car', 'Ca_13326_v3' => 'car', 'Ca_17944_v3' => 'car', 'Ca_18546_v3' => 'car', 'Ca_24219_v3' => 'car', 'Ca_29972_v3' => 'car', 'CBR_g3681' => 'cbr', 'CBR_g40021' => 'cbr', 'Cc01_g08140' => 'ccan', 'Cc02_g13410' => 'ccan', 'Cc02_g37480' => 'ccan', 'Cc05_g12030' => 'ccan', 'Cc09_g03370' => 'ccan', 'Cc09_g10300' => 'ccan', 'Cc10_g03530' => 'ccan', 'Cc10_g11380' => 'ccan', 'CDE01G0176' => 'cde', 'CDE02G0675' => 'cde', 'CDE02G0942' => 'cde', 'CDE02G1153' => 'cde', 'CDE02G4177' => 'cde', 'CDE04G2117' => 'cde', 'CDE04G2736' => 'cde', 'CDE08G1161' => 'cde', 'CDE09G1238' => 'cde', 'Cfa000467' => 'cfa', 'Cfa000947' => 'cfa', 'Cfa004969' => 'cfa', 'Cfa005284' => 'cfa', 'Cfa008993' => 'cfa', 'Cfa018187' => 'cfa', 'Cfa018454' => 'cfa', 'Cfa020585' => 'cfa', 'Ciclev10000424m.g' => 'ccl', 'Ciclev10003605m.g' => 'ccl', 'Ciclev10007828m.g' => 'ccl', 'Ciclev10014620m.g' => 'ccl', 'Ciclev10015169m.g' => 'ccl', 'Ciclev10018291m.g' => 'ccl', 'Ciclev10028256m.g' => 'ccl', 'Ciclev10033822m.g' => 'ccl', 'CiPaw.05G060300' => 'cil', 'CiPaw.05G085000' => 'cil', 'CiPaw.06G083700' => 'cil', 'CiPaw.06G120300' => 'cil', 'CiPaw.09G060500' => 'cil', 'CiPaw.09G123800' => 'cil', 'CiPaw.11G169700' => 'cil', 'CiPaw.12G118300' => 'cil', 'CiPaw.15G071000' => 'cil', 'CiPaw.15G081900' => 'cil', 'ClCG01G024610' => 'cla', 'ClCG03G006070' => 'cla', 'ClCG05G019250' => 'cla', 'ClCG09G009500' => 'cla', 'ClCG11G008200' => 'cla', 'ClCG11G018080' => 'cla', 'COL.COLO4_17373' => 'col', 'COL.COLO4_22994' => 'col', 'COL.COLO4_26389' => 'col', 'COL.COLO4_27170' => 'col', 'COL.COLO4_31074' => 'col', 'COL.COLO4_31465' => 'col', 'COL.COLO4_36438' => 'col', 'COL.COLO4_36439' => 'col', 'Cpa.g.c38781' => 'cpa', 'Cpa.g.sc128.12' => 'cpa', 'Cpa.g.sc166.7' => 'cpa', 'Cpa.g.sc166.8' => 'cpa', 'Cpa.g.sc20.111' => 'cpa', 'Cpa.g.sc27.31' => 'cpa', 'Cpa.g.sc64.36' => 'cpa', 'Cpa.g.sc64.37' => 'cpa', 'Cpa.g.sc66.49' => 'cpa', 'Cpa.g.sc80.64' => 'cpa', 'CsaV3_1G012320' => 'csa', 'CsaV3_2G008480' => 'csa', 'CsaV3_2G033450' => 'csa', 'CsaV3_3G044830' => 'csa', 'CsaV3_4G033710' => 'csa', 'CsaV3_6G051730' => 'csa', 'CsaV3_7G025350' => 'csa', 'CSS0001067' => 'camsi', 'CSS0005996' => 'camsi', 'CSS0006590' => 'camsi', 'CSS0009673' => 'camsi', 'CSS0010201' => 'camsi', 'CSS0010549' => 'camsi', 'CSS0011364' => 'camsi', 'CSS0014473' => 'camsi', 'CSS0014961' => 'camsi', 'CSS0020191' => 'camsi', 'CSS0021165' => 'camsi', 'CSS0022306' => 'camsi', 'CSS0030591' => 'camsi', 'CSS0030696' => 'camsi', 'CSS0032653' => 'camsi', 'CSS0037487' => 'camsi', 'CSS0041102' => 'camsi', 'CSS0041261' => 'camsi', 'CSS0046246' => 'camsi', 'CSS0049256' => 'camsi', 'DCAR_004075' => 'dca', 'DCAR_011538' => 'dca', 'DCAR_019553' => 'dca', 'DCAR_020952' => 'dca', 'DCAR_021739' => 'dca', 'DCAR_027407' => 'dca', 'DCAR_027913' => 'dca', 'DCAR_028066' => 'dca', 'Dinv05899' => 'din', 'Dinv07563' => 'din', 'Dinv08010' => 'din', 'Dinv14125' => 'din', 'Dinv20172' => 'din', 'Dinv30743' => 'din', 'Dinv31229' => 'din', 'Dinv34162' => 'din', 'Dinv36028' => 'din', 'Dinv39368' => 'din', 'Dinv40565' => 'din', 'Dinv41706' => 'din', 'Duzib052G0089' => 'dzi', 'Duzib116G0641' => 'dzi', 'Duzib132G0069' => 'dzi', 'Duzib132G1219' => 'dzi', 'Duzib147G0278' => 'dzi', 'Duzib160G0480' => 'dzi', 'Duzib170G0661' => 'dzi', 'Duzib177G0591' => 'dzi', 'Duzib187G1353' => 'dzi', 'Duzib192G0858' => 'dzi', 'Duzib192G0883' => 'dzi', 'Duzib213G0506' => 'dzi', 'Duzib235G0289' => 'dzi', 'Duzib251G0422' => 'dzi', 'ECA232G3898' => 'eca', 'ECA233G5950' => 'eca', 'ECA234G1699' => 'eca', 'ECA234G2421' => 'eca', 'ECA236G0426' => 'eca', 'ECA236G4331' => 'eca', 'ECA248G2573' => 'eca', 'EL10Ac1g00077' => 'bvu', 'EL10Ac1g01746' => 'bvu', 'EL10Ac2g03464' => 'bvu', 'EL10Ac4g08176' => 'bvu', 'EL10Ac7g17521' => 'bvu', 'EL10Ac8g20386' => 'bvu', 'EL10Ac9g21343' => 'bvu', 'EL10Ac9g22688' => 'bvu', 'Eucgr.B03434' => 'egr', 'Eucgr.D00618' => 'egr', 'Eucgr.E02395' => 'egr', 'Eucgr.F01129' => 'egr', 'Eucgr.F02622' => 'egr', 'Eucgr.F04207' => 'egr', 'FAN01G0570' => 'fan', 'FAN03G3351' => 'fan', 'FAN06G3702' => 'fan', 'FAN07G2149' => 'fan', 'FAN10G3758' => 'fan', 'FAN11G1170' => 'fan', 'FAN11G2050' => 'fan', 'FAN11G2724' => 'fan', 'FAN12G1700' => 'fan', 'FAN12G2028' => 'fan', 'FAN15G1160' => 'fan', 'FAN15G3063' => 'fan', 'FAN16G2540' => 'fan', 'FAN16G3077' => 'fan', 'FAN16G3624' => 'fan', 'FAN17G0221' => 'fan', 'FAN20G2492' => 'fan', 'FAN20G2905' => 'fan', 'FAN21G0548' => 'fan', 'FAN21G1300' => 'fan', 'FAN22G0077' => 'fan', 'FAN22G1315' => 'fan', 'FAN24G1280' => 'fan', 'FAN24G1445' => 'fan', 'FAN24G3527' => 'fan', 'FAN25G0464' => 'fan', 'FAN25G2885' => 'fan', 'FAN25G3270' => 'fan', 'FAN27G1101' => 'fan', 'FAN27G2846' => 'fan', 'FAN27G3524' => 'fan', 'FvH4_2g11770' => 'fve', 'FvH4_2g15630' => 'fve', 'FvH4_3g05570' => 'fve', 'FvH4_3g09110' => 'fve', 'FvH4_3g19940' => 'fve', 'FvH4_4g04821' => 'fve', 'FvH4_4g31480' => 'fve', 'FvH4_7g01740' => 'fve', 'Glyma.05G130400' => 'gma', 'Glyma.05G156400' => 'gma', 'Glyma.07G197000' => 'gma', 'Glyma.08G085151' => 'gma', 'Glyma.08G114500' => 'gma', 'Glyma.08G300400' => 'gma', 'Glyma.10G215800' => 'gma', 'Glyma.12G224400' => 'gma', 'Glyma.13G179300' => 'gma', 'Glyma.13G218151' => 'gma', 'Glyma.13G238800' => 'gma', 'Glyma.13G276900' => 'gma', 'Glyma.14G078200' => 'gma', 'Glyma.15G074500' => 'gma', 'Glyma.15G094100' => 'gma', 'Glyma.17G247200' => 'gma', 'Glyma.18G120100' => 'gma', 'Glyma.20G176000' => 'gma', 'Gohir.A01G063600' => 'ghi', 'Gohir.A01G170301' => 'ghi', 'Gohir.A02G060500' => 'ghi', 'Gohir.A05G133850' => 'ghi', 'Gohir.A05G161400' => 'ghi', 'Gohir.A06G012900' => 'ghi', 'Gohir.A06G035901' => 'ghi', 'Gohir.A06G127100' => 'ghi', 'Gohir.A06G210500' => 'ghi', 'Gohir.A08G008650' => 'ghi', 'Gohir.A09G072700' => 'ghi', 'Gohir.A09G088301' => 'ghi', 'Gohir.A10G040600' => 'ghi', 'Gohir.A12G036300' => 'ghi', 'Gohir.A12G143350' => 'ghi', 'Gohir.A12G165500' => 'ghi', 'Gohir.A13G145700' => 'ghi', 'Gohir.D01G050000' => 'ghi', 'Gohir.D01G051366' => 'ghi', 'Gohir.D01G161350' => 'ghi', 'Gohir.D02G065900' => 'ghi', 'Gohir.D05G164200' => 'ghi', 'Gohir.D05G355500' => 'ghi', 'Gohir.D06G010400' => 'ghi', 'Gohir.D06G111250' => 'ghi', 'Gohir.D06G132000' => 'ghi', 'Gohir.D06G210500' => 'ghi', 'Gohir.D07G165675' => 'ghi', 'Gohir.D08G062240' => 'ghi', 'Gohir.D08G086101' => 'ghi', 'Gohir.D08G138060' => 'ghi', 'Gohir.D09G072300' => 'ghi', 'Gohir.D10G041400' => 'ghi', 'Gohir.D11G191020' => 'ghi', 'Gohir.D11G212066' => 'ghi', 'Gohir.D12G036300' => 'ghi', 'Gohir.D12G168600' => 'ghi', 'Gohir.D13G150600' => 'ghi', 'Gorai.001G057300' => 'gra', 'Gorai.002G069900' => 'gra', 'Gorai.002G200000' => 'gra', 'Gorai.003G067600' => 'gra', 'Gorai.005G074800' => 'gra', 'Gorai.006G087300' => 'gra', 'Gorai.008G037500' => 'gra', 'Gorai.008G181400' => 'gra', 'Gorai.009G169400' => 'gra', 'Gorai.009G387900' => 'gra', 'Gorai.010G013300' => 'gra', 'Gorai.010G153800' => 'gra', 'Gorai.010G255800' => 'gra', 'Gorai.011G043700' => 'gra', 'Gorai.011G198900' => 'gra', 'Gorai.013G168400' => 'gra', 'GSVIVG01005212001' => 'vvi', 'GSVIVG01006163001' => 'vvi', 'GSVIVG01009625001' => 'vvi', 'GSVIVG01014338001' => 'vvi', 'GSVIVG01020005001' => 'vvi', 'GSVIVG01021450001' => 'vvi', 'GSVIVG01023975001' => 'vvi', 'GSVIVG01034490001' => 'vvi', 'HanXRQChr04g0112071' => 'han', 'HanXRQChr05g0131151' => 'han', 'HanXRQChr09g0262371' => 'han', 'HanXRQChr09g0268401' => 'han', 'HanXRQChr10g0279241' => 'han', 'HanXRQChr10g0297961' => 'han', 'HanXRQChr11g0326231' => 'han', 'HanXRQChr11g0328471' => 'han', 'HanXRQChr16g0507941' => 'han', 'HanXRQChr17g0560211' => 'han', 'Haze_02108' => 'cav', 'Haze_02428' => 'cav', 'Haze_05593' => 'cav', 'Haze_06448' => 'cav', 'Haze_09427' => 'cav', 'Haze_12022' => 'cav', 'Haze_17612' => 'cav', 'Haze_17928' => 'cav', 'Hma1.2p1_0032F.1_g019250' => 'hma', 'Hma1.2p1_0163F.1_g072690' => 'hma', 'Hma1.2p1_0265F.1_g106710' => 'hma', 'Hma1.2p1_0286F.1_g113970' => 'hma', 'Hma1.2p1_0363F.1_g136640' => 'hma', 'Hma1.2p1_0584F.1_g183470' => 'hma', 'Hma1.2p1_0885F.1_g232570' => 'hma', 'HPP92_006022' => 'vpl', 'HPP92_007320' => 'vpl', 'HPP92_011521' => 'vpl', 'HPP92_019387' => 'vpl', 'HPP92_024038' => 'vpl', 'Hund05891' => 'sun', 'Hund06450' => 'sun', 'Hund12053' => 'sun', 'Hund16800' => 'sun', 'Hund21222' => 'sun', 'Hund22896' => 'sun', 'Hund23746' => 'sun', 'Hund27083' => 'sun', 'Lalb_Chr02g0141831' => 'lal', 'Lalb_Chr02g0141841' => 'lal', 'Lalb_Chr05g0220411' => 'lal', 'Lalb_Chr06g0162081' => 'lal', 'Lalb_Chr09g0327651' => 'lal', 'Lalb_Chr13g0295051' => 'lal', 'Lalb_Chr15g0086801' => 'lal', 'Lalb_Chr16g0383781' => 'lal', 'Lalb_Chr16g0383791' => 'lal', 'Lalb_Chr18g0055441' => 'lal', 'Lalb_Chr18g0059611' => 'lal', 'Lalb_Chr20g0109661' => 'lal', 'Lalb_Chr20g0109831' => 'lal', 'Lalb_Chr20g0121871' => 'lal', 'Lalb_Chr22g0355361' => 'lal', 'Lalb_Chr25g0286371' => 'lal', 'Lj1A1187G43' => 'lonja', 'Lj1A1205T50' => 'lonja', 'Lj1A800G33' => 'lonja', 'Lj1C1187T7' => 'lonja', 'Lj1C843T11' => 'lonja', 'Lj1g0010940' => 'lja', 'Lj2A288T69' => 'lonja', 'Lj3g0024276' => 'lja', 'Lj4A47T76' => 'lonja', 'Lj4g0005805' => 'lja', 'Lj4g0006097' => 'lja', 'Lj4g0008528' => 'lja', 'Lj4g0024907' => 'lja', 'Lj5g0012472' => 'lja', 'Lj5g0018648' => 'lja', 'Lj6C789G1' => 'lonja', 'Lj6g0004000' => 'lja', 'Lj7A292G67' => 'lonja', 'Lj7A292T64' => 'lonja', 'Lj9A400T58' => 'lonja', 'Lsat_1_v5_gn_1_126181' => 'lsa', 'Lsat_1_v5_gn_4_123041' => 'lsa', 'Lsat_1_v5_gn_4_133620' => 'lsa', 'Lsat_1_v5_gn_4_53221' => 'lsa', 'Lsat_1_v5_gn_4_71961' => 'lsa', 'Lsat_1_v5_gn_7_105241' => 'lsa', 'Lsat_1_v5_gn_7_21361' => 'lsa', 'Lsat_1_v5_gn_7_28860' => 'lsa', 'Lsat_1_v5_gn_7_31260' => 'lsa', 'Lsat_1_v5_gn_8_52801' => 'lsa', 'Manes.02G191400' => 'mes', 'Manes.03G110100' => 'mes', 'Manes.04G071100' => 'mes', 'Manes.05G100500' => 'mes', 'Manes.05G164700' => 'mes', 'Manes.15G087000' => 'mes', 'Manes.15G121500' => 'mes', 'Manes.16G028300' => 'mes', 'Manes.17G046100' => 'mes', 'Manes.17G069800' => 'mes', 'Manes.18G100500' => 'mes', 'Mapoly0002s0109' => 'mpo', 'Mapoly0024s0007' => 'mpo', 'Mapoly0089s0032' => 'mpo', 'MBI04_g42241_MAGBIO' => 'mbi', 'MBI05_g11988_MAGBIO' => 'mbi', 'MBI05_g35452_MAGBIO' => 'mbi', 'MBI07_g30179_MAGBIO' => 'mbi', 'MBI07_g35859_MAGBIO' => 'mbi', 'MBI07_g35860_MAGBIO' => 'mbi', 'MBI07_g37166_MAGBIO' => 'mbi', 'MBI08_g18172_MAGBIO' => 'mbi', 'MBI09_g08441_MAGBIO' => 'mbi', 'MBI13_g01676_MAGBIO' => 'mbi', 'MBI14_g42955_MAGBIO' => 'mbi', 'MBI16_g13161_MAGBIO' => 'mbi', 'MBI17_g27204_MAGBIO' => 'mbi', 'MBI19_g21595_MAGBIO' => 'mbi', 'MD00G1148400' => 'mdo', 'MD02G1301200' => 'mdo', 'MD03G1227800' => 'mdo', 'MD05G1041100' => 'mdo', 'MD05G1124800' => 'mdo', 'MD05G1284000' => 'mdo', 'MD05G1338800' => 'mdo', 'MD05G1338900' => 'mdo', 'MD07G1022800' => 'mdo', 'MD10G1047500' => 'mdo', 'MD10G1127500' => 'mdo', 'MD10G1262300' => 'mdo', 'MD10G1293800' => 'mdo', 'MD16G1074300' => 'mdo', 'Medtr1g021670' => 'mtr', 'Medtr1g096320' => 'mtr', 'Medtr2g013690' => 'mtr', 'Medtr2g019450' => 'mtr', 'Medtr2g085170' => 'mtr', 'Medtr4g088785' => 'mtr', 'Medtr8g055930' => 'mtr', 'Medtr8g085850' => 'mtr', 'MELO3C002605.2' => 'cme', 'MELO3C003891.2' => 'cme', 'MELO3C004012.2' => 'cme', 'MELO3C007134.2' => 'cme', 'MELO3C008118.2' => 'cme', 'MELO3C016700.2' => 'cme', 'MELO3C024127.2' => 'cme', 'MELO3C033361.2' => 'cme', 'MELO3C033362.2' => 'cme', 'Migut.C00430' => 'egut', 'Migut.C01246' => 'egut', 'Migut.E00101' => 'egut', 'Migut.H01486' => 'egut', 'Migut.H01939' => 'egut', 'Migut.K00360' => 'egut', 'Migut.M00910' => 'egut', 'Migut.M01139' => 'egut', 'Migut.N02677' => 'egut', 'MSTRG.13252' => 'ama', 'MSTRG.14701' => 'ama', 'MSTRG.1521' => 'ama', 'MSTRG.15884' => 'ama', 'MSTRG.16242' => 'ama', 'MSTRG.22285' => 'ama', 'MSTRG.22444' => 'ama', 'MSTRG.2349' => 'ama', 'MSTRG.26308' => 'ama', 'MSTRG.28296' => 'ama', 'MSTRG.9895' => 'ama', 'Nitab4.5_0000110g0060' => 'nta', 'Nitab4.5_0000420g0130' => 'nta', 'Nitab4.5_0000422g0030' => 'nta', 'Nitab4.5_0000560g0180' => 'nta', 'Nitab4.5_0000703g0100' => 'nta', 'Nitab4.5_0000786g0200' => 'nta', 'Nitab4.5_0001336g0020' => 'nta', 'Nitab4.5_0001796g0030' => 'nta', 'Nitab4.5_0003348g0060' => 'nta', 'Nitab4.5_0003698g0040' => 'nta', 'Nitab4.5_0003942g0090' => 'nta', 'Nitab4.5_0004775g0070' => 'nta', 'Nitab4.5_0004864g0030' => 'nta', 'Nitab4.5_0005615g0020' => 'nta', 'Nitab4.5_0009288g0030' => 'nta', 'Nitab4.5_0009341g0010' => 'nta', 'Nitab4.5_0009535g0010' => 'nta', 'Nn1g03995' => 'nnu', 'Nn1g04100' => 'nnu', 'Nn1g06530' => 'nnu', 'Nn3g16404' => 'nnu', 'Nn3g17212' => 'nnu', 'Nn3g20776' => 'nnu', 'Nn3g21923' => 'nnu', 'Nn5g27737' => 'nnu', 'Nn5g29461' => 'nnu', 'Nn7g38355' => 'nnu', 'Nn8g39873' => 'nnu', 'Oeu000548.2' => 'oeu', 'Oeu004672.1' => 'oeu', 'Oeu015605.2' => 'oeu', 'Oeu016092.1' => 'oeu', 'Oeu017879.3' => 'oeu', 'Oeu024910.1' => 'oeu', 'Oeu028965.1' => 'oeu', 'Oeu031269.1' => 'oeu', 'Oeu031270.1' => 'oeu', 'Oeu032535.1' => 'oeu', 'Oeu034151.1' => 'oeu', 'Oeu034152.1' => 'oeu', 'Oeu034588.2' => 'oeu', 'Oeu050846.1' => 'oeu', 'Oeu050849.2' => 'oeu', 'Oeu051063.2' => 'oeu', 'Oeu052368.1' => 'oeu', 'Oeu052370.1' => 'oeu', 'Os01g0210400' => 'osa', 'Os01g0304300' => 'osa', 'Os01g0749100' => 'osa', 'Os02g0745800' => 'osa', 'Os03g0769050' => 'osa', 'Os05g0531500' => 'osa', 'Os06g0724300' => 'osa', 'Os11g0198100' => 'osa', 'Peaxi162Scf00069g01425' => 'pax', 'Peaxi162Scf00280g00811' => 'pax', 'Peaxi162Scf00310g00615' => 'pax', 'Peaxi162Scf00362g00542' => 'pax', 'Peaxi162Scf00461g00310' => 'pax', 'Peaxi162Scf00530g00118' => 'pax', 'Peaxi162Scf00541g00057' => 'pax', 'Peaxi162Scf00661g00017' => 'pax', 'Peaxi162Scf00926g00027' => 'pax', 'Peaxi162Scf01064g00263' => 'pax', 'Peaxi162Scf01211g00135' => 'pax', 'PGR004G2336' => 'pgr', 'PGR042G0327' => 'pgr', 'PGR042G1957' => 'pgr', 'PGR042G2003' => 'pgr', 'PGR042G3929' => 'pgr', 'PGR083G1137' => 'pgr', 'PGR083G1364' => 'pgr', 'PGSC0003DMG400003381' => 'stu', 'PGSC0003DMG400003417' => 'stu', 'PGSC0003DMG400008981' => 'stu', 'PGSC0003DMG400012417' => 'stu', 'PGSC0003DMG400012823' => 'stu', 'PGSC0003DMG400016885' => 'stu', 'PGSC0003DMG400022812' => 'stu', 'PGSC0003DMG400029726' => 'stu', 'PGSC0003DMG401009243' => 'stu', 'PGSC0003DMG401031505' => 'stu', 'PGSC0003DMG402031505' => 'stu', 'Phvul.001G017600' => 'pvu', 'Phvul.002G193500' => 'pvu', 'Phvul.002G228900' => 'pvu', 'Phvul.002G236800' => 'pvu', 'Phvul.003G049500' => 'pvu', 'Phvul.005G072000' => 'pvu', 'Phvul.006G164800' => 'pvu', 'Phvul.006G185100' => 'pvu', 'Phvul.007G090000' => 'pvu', 'Potri.001G399800' => 'ptr', 'Potri.002G149900' => 'ptr', 'Potri.004G044100' => 'ptr', 'Potri.004G177600' => 'ptr', 'Potri.009G138000' => 'ptr', 'Potri.010G094000' => 'ptr', 'Potri.011G053000' => 'ptr', 'Potri.011G119300' => 'ptr', 'Potri.013G113700' => 'ptr', 'Potri.018G107800' => 'ptr', 'Potri.019G084100' => 'ptr', 'Pp3c14_23720' => 'ppa', 'Pp3c16_6340' => 'ppa', 'Pp3c23_13420' => 'ppa', 'Pp3c24_2740' => 'ppa', 'Pp3c25_860' => 'ppa', 'Pp3c8_21750' => 'ppa', 'Prupe.1G273000' => 'ppe', 'Prupe.1G273700' => 'ppe', 'Prupe.1G274100' => 'ppe', 'Prupe.2G023300' => 'ppe', 'Prupe.4G048000' => 'ppe', 'Prupe.4G080400' => 'ppe', 'Prupe.4G181200' => 'ppe', 'Prupe.8G056900' => 'ppe', 'Prupe.8G168700' => 'ppe', 'Psat1g189080' => 'psa', 'Psat1g204760' => 'psa', 'Psat4g175560' => 'psa', 'Psat4g177720' => 'psa', 'Psat5g244240' => 'psa', 'Psat6g010720' => 'psa', 'Psat6g187200' => 'psa', 'Psat7g072040' => 'psa', 'PSO017G3501' => 'pso', 'PSO063G2148' => 'pso', 'PSO063G5608' => 'pso', 'PSO210G6392' => 'pso', 'PSO541G2319' => 'pso', 'PSO541G2836' => 'pso', 'PSO541G4012' => 'pso', 'PSO541G6253' => 'pso', 'PSO675G0580' => 'pso', 'PSO675G0856' => 'pso', 'PSO675G5635' => 'pso', 'PSO675G9157' => 'pso', 'PSO832G1660' => 'pso', 'PSO832G1969' => 'pso', 'QL02p007186' => 'qlo', 'QL02p033904' => 'qlo', 'QL03p064391' => 'qlo', 'QL05p040593' => 'qlo', 'QL05p058242' => 'qlo', 'QL08p021825' => 'qlo', 'QL11p004981' => 'qlo', 'RcHm_v2.0_Chr1g0318301' => 'rch', 'RcHm_v2.0_Chr4g0418501' => 'rch', 'RcHm_v2.0_Chr4g0439971' => 'rch', 'RcHm_v2.0_Chr5g0008541' => 'rch', 'RcHm_v2.0_Chr5g0014101' => 'rch', 'RcHm_v2.0_Chr5g0014131' => 'rch', 'RcHm_v2.0_Chr5g0033621' => 'rch', 'RcHm_v2.0_Chr6g0272041' => 'rch', 'RcHm_v2.0_Chr6g0278831' => 'rch', 'Rhsim02G0130400' => 'rsi', 'Rhsim02G0171100' => 'rsi', 'Rhsim05G0053000' => 'rsi', 'Rhsim05G0053100' => 'rsi', 'Rhsim06G0096500' => 'rsi', 'Rhsim06G0096600' => 'rsi', 'Rhsim06G0199100' => 'rsi', 'Rhsim12G0062300' => 'rsi', 'Rhsim12G0062800' => 'rsi', 'Sabra02G0118600' => 'sbr', 'Sabra04G0027300' => 'sbr', 'Sabra04G0119500' => 'sbr', 'Sabra08G0112500' => 'sbr', 'Sabra11G0036800' => 'sbr', 'Sabra11G0103800' => 'sbr', 'Sabra13G0096300' => 'sbr', 'Sabra16G0262300' => 'sbr', 'Sabra18G0091700' => 'sbr', 'Sabra19G0095400' => 'sbr', 'SalBow6G3080' => 'sbo', 'SalBow7G1157' => 'sbo', 'SalBow7G2123' => 'sbo', 'SalBow7G2285' => 'sbo', 'SalBow7G3537' => 'sbo', 'SalBow8G2947' => 'sbo', 'SalBow8G4463' => 'sbo', 'SalBow8G5466' => 'sbo', 'Sc01g0001750' => 'sci', 'Sc02g0006640' => 'sci', 'Sc02g0006670' => 'sci', 'Sc04g0008220' => 'sci', 'Sc05g0006190' => 'sci', 'Sc08g0002760' => 'sci', 'Sc17g0006170' => 'sci', 'Sc22g0002050' => 'sci', 'Sc23g0001190' => 'sci', 'Sc24g0000980' => 'sci', 'Sed0006245' => 'sed', 'Sed0007543' => 'sed', 'Sed0009411' => 'sed', 'Sed0010765' => 'sed', 'Sed0012944' => 'sed', 'Sed0014682' => 'sed', 'Sed0016174' => 'sed', 'Sed0016796' => 'sed', 'Sed0020317' => 'sed', 'Sed0021467' => 'sed', 'SEGI_01316' => 'sgi', 'SEGI_03374' => 'sgi', 'SEGI_16265' => 'sgi', 'SEGI_18569' => 'sgi', 'SEGI_20351' => 'sgi', 'SEGI_26395' => 'sgi', 'SEGI_29469' => 'sgi', 'SEGI_34771' => 'sgi', 'SEGI_36769' => 'sgi', 'SEGI_37139' => 'sgi', 'SGA_v2.0_scaffold100G29687' => 'sas', 'SGA_v2.0_scaffold118G32472' => 'sas', 'SGA_v2.0_scaffold14G07051' => 'sas', 'SGA_v2.0_scaffold183G39845' => 'sas', 'SGA_v2.0_scaffold1G00174' => 'sas', 'SGA_v2.0_scaffold22G09714' => 'sas', 'SGA_v2.0_scaffold333G48992' => 'sas', 'SGA_v2.0_scaffold46G17491' => 'sas', 'SGA_v2.0_scaffold49G18294' => 'sas', 'SGA_v2.0_scaffold63G21658' => 'sas', 'SHI01741' => 'shi', 'SHI05771' => 'shi', 'SHI18077' => 'shi', 'SHI20525' => 'shi', 'SHI20527' => 'shi', 'SHI20528' => 'shi', 'SMO172G0185' => 'smo', 'SMO198G0020' => 'smo', 'SMO351G0006' => 'smo', 'SMO356G0118' => 'smo', 'SMO358G0296' => 'smo', 'SMO367G0079' => 'smo', 'SMO367G1277' => 'smo', 'Solyc01g014220.3' => 'sly', 'Solyc01g111770.2' => 'sly', 'Solyc02g078180.3' => 'sly', 'Solyc03g006430.3' => 'sly', 'Solyc03g006456.1' => 'sly', 'Solyc03g079860.2' => 'sly', 'Solyc04g079770.3' => 'sly', 'Solyc05g007430.4' => 'sly', 'Solyc07g063150.3' => 'sly', 'Solyc08g016620.3' => 'sly', 'Solyc09g057590.3' => 'sly', 'Solyc09g057600.1' => 'sly', 'Solyc10g009050.3' => 'sly', 'Solyc11g017420.2' => 'sly', 'Sopen01g053810' => 'spe', 'Sopen02g023040' => 'spe', 'Sopen03g002440' => 'spe', 'Sopen04g033350' => 'spe', 'Sopen05g003310' => 'spe', 'Sopen07g004050' => 'spe', 'Sopen07g031340' => 'spe', 'Sopen08g006990' => 'spe', 'Sopen10g004830' => 'spe', 'Sopen11g009370' => 'spe', 'Sp1g24450' => 'spa', 'Sp1g29670' => 'spa', 'Sp1g39600' => 'spa', 'Sp2g11080' => 'spa', 'Sp2g13970' => 'spa', 'Sp4g16130' => 'spa', 'Sp6g13080' => 'spa', 'Sp7g37270' => 'spa', 'TAR371G0065' => 'tar', 'TAR376G0340' => 'tar', 'TAR376G0435' => 'tar', 'TAR381G0002' => 'tar', 'TAR381G1236' => 'tar', 'TAR624G0055' => 'tar', 'TAR624G0324' => 'tar', 'TAR624G0696' => 'tar', 'TAR624G0906' => 'tar', 'TAR625G0107' => 'tar', 'TAR626G0015' => 'tar', 'TAR626G1356' => 'tar', 'TAR627G0888' => 'tar', 'TAR628G0399' => 'tar', 'TAR628G1327' => 'tar', 'TAR629G2831' => 'tar', 'TAR629G2874' => 'tar', 'TAR633G1432' => 'tar', 'TAR633G2771' => 'tar', 'THA.LOC104803394' => 'tha', 'THA.LOC104805153' => 'tha', 'THA.LOC104806784' => 'tha', 'THA.LOC104810473' => 'tha', 'THA.LOC104813100' => 'tha', 'THA.LOC104814215' => 'tha', 'THA.LOC104815554' => 'tha', 'THA.LOC104820544' => 'tha', 'THA.LOC104824754' => 'tha', 'THA.LOC104827717' => 'tha', 'Thecc.02G031400' => 'tca', 'Thecc.02G055900' => 'tca', 'Thecc.02G350800' => 'tca', 'Thecc.06G150900' => 'tca', 'Thecc.06G186600' => 'tca', 'Thecc.07G089600' => 'tca', 'Thecc.08G020400' => 'tca', 'Thecc.08G182100' => 'tca', 'Thhalv10000873m.g' => 'esa', 'Thhalv10004185m.g' => 'esa', 'Thhalv10006981m.g' => 'esa', 'Thhalv10007204m.g' => 'esa', 'Thhalv10011374m.g' => 'esa', 'Thhalv10013482m.g' => 'esa', 'Thhalv10017801m.g' => 'esa', 'Thhalv10024983m.g' => 'esa', 'TPR.G12072' => 'tpr', 'TPR.G15769' => 'tpr', 'TPR.G16504' => 'tpr', 'TPR.G16506' => 'tpr', 'TPR.G24345' => 'tpr', 'TPR.G26666' => 'tpr', 'TPR.G27320' => 'tpr', 'TPR.G31819' => 'tpr', 'TPR.G38879' => 'tpr', 'TPR.G39015' => 'tpr', 'TPR.G8819' => 'tpr', 'TWI09G0924' => 'twi', 'TWI12G0811' => 'twi', 'TWI12G1294' => 'twi', 'TWI31G0150' => 'twi', 'TWI36G1262' => 'twi', 'TWI38G1287' => 'twi', 'TWI38G1633' => 'twi', 'TWI38G1982' => 'twi', 'TWI39G0116' => 'twi', 'TWI60G1011' => 'twi', 'TWI63G0171' => 'twi', 'TWI73G0839' => 'twi', 'TWI79G1511' => 'twi', 'unitig_0.g915' => 'ugi', 'unitig_0.g916' => 'ugi', 'unitig_21.g20219' => 'ugi', 'unitig_21.g20416' => 'ugi', 'unitig_578.g16132' => 'ugi', 'unitig_578.g16718' => 'ugi', 'unitig_62.g23481' => 'ugi', 'unitig_744.g24535' => 'ugi', 'unitig_749.g13525' => 'ugi', 'vmacro01248' => 'vma', 'vmacro02290' => 'vma', 'vmacro10946' => 'vma', 'vmacro11865' => 'vma', 'vmacro12493' => 'vma', 'vmacro17322' => 'vma', 'vmacro21599' => 'vma', 'vmacro23041' => 'vma', 'VMungo0251G0004' => 'vmu', 'VMungo0251G2639' => 'vmu', 'VMungo0251G2967' => 'vmu', 'VMungo0540G0864' => 'vmu', 'VMungo0540G1569' => 'vmu', 'VMungo0647G0317' => 'vmu', 'VMungo0720G1373' => 'vmu', 'VMungo0720G1508' => 'vmu', 'VMungo1080G0485' => 'vmu', 'VMungo1215G3177' => 'vmu', 'Zm00001eb112600' => 'zma', 'Zm00001eb120220' => 'zma', 'Zm00001eb153240' => 'zma', 'Zm00001eb168880' => 'zma', 'Zm00001eb213920' => 'zma', 'Zm00001eb228280' => 'zma', 'Zm00001eb254580' => 'zma', 'Zm00001eb272180' => 'zma', 'Zm00001eb293190' => 'zma', 'Zm00001eb322930' => 'zma', 'Zm00001eb353360' => 'zma', 'Zm00001eb353390' => 'zma', 'Zm00001eb353430' => 'zma', 'Zm00001eb353440' => 'zma', 'Zm00001eb353780' => 'zma' ), 'gf_id' => 'HOM05D000499', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000499' ), 'data_identifier' => 'HOM05D000499', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000499', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1066', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p29780' => 'bna', 'A02p33180' => 'bna', 'A03p16470' => 'bna', 'A03p66010' => 'bna', 'A04p25970' => 'bna', 'A06p01270' => 'bna', 'A06p46080' => 'bna', 'A07p11400' => 'bna', 'A08p01840' => 'bna', 'A08p08230' => 'bna', 'A08p25740' => 'bna', 'A09p32070' => 'bna', 'A09p37830' => 'bna', 'A09p42840' => 'bna', 'A09p42850' => 'bna', 'Aa31LG10G2060' => 'aar', 'Aa31LG2G7410' => 'aar', 'Aa31LG6G10200' => 'aar', 'Aa31LG6G16680' => 'aar', 'Aa31LG6G8470' => 'aar', 'Aa31LG9G12730' => 'aar', 'Aa31LG9G13680' => 'aar', 'Aa31LG9G14920' => 'aar', 'Aa31LG9G6650' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4977' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5467' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3254' => 'aag', 'Actinidia02578' => 'ach', 'Actinidia07693' => 'ach', 'Actinidia08413' => 'ach', 'Actinidia08414' => 'ach', 'Actinidia15289' => 'ach', 'Actinidia19871' => 'ach', 'Actinidia21475' => 'ach', 'Actinidia22576' => 'ach', 'Actinidia28327' => 'ach', 'Actinidia32491' => 'ach', 'Actinidia39463' => 'ach', 'Actinidia39571' => 'ach', 'Ah.01g013750' => 'amhyb', 'Ah.01g023210' => 'amhyb', 'Ah.04g164850' => 'amhyb', 'Ah.05g178060' => 'amhyb', 'Ah.07g204270' => 'amhyb', 'Ah.07g208480' => 'amhyb', 'Ah.09g237410' => 'amhyb', 'Ah.14g089460' => 'amhyb', 'AL1G41790' => 'aly', 'AL1G49050' => 'aly', 'AL1G53810' => 'aly', 'AL1G61400' => 'aly', 'AL4G18580' => 'aly', 'AL5G12510' => 'aly', 'AL5G12540' => 'aly', 'AL6G43230' => 'aly', 'AL7G10370' => 'aly', 'AL7G19250' => 'aly', 'AL8G12240' => 'aly', 'AL8G18540' => 'aly', 'Aqoxy1G02409' => 'aox', 'Aqoxy2G03993' => 'aox', 'Aqoxy3G03357' => 'aox', 'Aqoxy4G00785' => 'aox', 'Aqoxy5G02598' => 'aox', 'Aqoxy6G00132' => 'aox', 'Aqoxy7G01776' => 'aox', 'Aqoxy7G02316' => 'aox', 'Aqoxy7G03973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.12AFKW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B8730' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27IQR1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3F75VG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3RE0GA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41TCQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.527VTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FIR39' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5W8UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DA38EV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ63HS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H1I32C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HC27T5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4M8AP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7N3CZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9UVDZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LS1NQA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT1D4B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SKC4TM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCFV76' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF9Q1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQWD9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1ZM88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WE07RT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YCK7VH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJE6Q6' => 'arhy', 'AT1G28240' => 'ath', 'AT1G34550' => 'ath', 'AT1G53040' => 'ath', 'AT2G02910' => 'ath', 'AT4G09630' => 'ath', 'AT4G38500' => 'ath', 'AT5G42660' => 'ath', 'AT5G46220' => 'ath', 'ATR0152G026' => 'atr', 'ATR0564G343' => 'atr', 'ATR0706G151' => 'atr', 'ATR0733G207' => 'atr', 'ATR0751G234' => 'atr', 'ATR0807G048' => 'atr', 'ATR1091G084' => 'atr', 'Atru.chr10.1229' => 'acertr', 'Atru.chr10.1230' => 'acertr', 'Atru.chr10.1874' => 'acertr', 'Atru.chr11.1808' => 'acertr', 'Atru.chr13.1795' => 'acertr', 'Atru.chr13.570' => 'acertr', 'Atru.chr2.2608' => 'acertr', 'Atru.chr2.2609' => 'acertr', 'Atru.chr5.3428' => 'acertr', 'Atru.chr8.1171' => 'acertr', 'AUR62004651' => 'cqu', 'AUR62008675' => 'cqu', 'AUR62010014' => 'cqu', 'AUR62013004' => 'cqu', 'AUR62014825' => 'cqu', 'AUR62015015' => 'cqu', 'AUR62015151' => 'cqu', 'AUR62017020' => 'cqu', 'AUR62019422' => 'cqu', 'AUR62023570' => 'cqu', 'AUR62025571' => 'cqu', 'AUR62029098' => 'cqu', 'AUR62033863' => 'cqu', 'AUR62034296' => 'cqu', 'AUR62040075' => 'cqu', 'BcaB02g07334' => 'bca', 'BcaB02g10575' => 'bca', 'BcaB03g12119' => 'bca', 'BcaB03g12120' => 'bca', 'BcaB03g13945' => 'bca', 'BcaB04g17123' => 'bca', 'BcaB04g17867' => 'bca', 'BcaB04g19839' => 'bca', 'BcaB07g30317' => 'bca', 'BcaB07g32432' => 'bca', 'BcaB07g33362' => 'bca', 'BcaB08g36611' => 'bca', 'BcaC01g00028' => 'bca', 'BcaC01g01356' => 'bca', 'BcaC01g02034' => 'bca', 'BcaC01g06051' => 'bca', 'BcaC03g16839' => 'bca', 'BcaC03g17176' => 'bca', 'BcaC05g26829' => 'bca', 'BcaC06g31490' => 'bca', 'BcaC06g35344' => 'bca', 'BcaC06g36570' => 'bca', 'BcaC07g37537' => 'bca', 'BcaC08g43491' => 'bca', 'BcaC08g43773' => 'bca', 'BcaNung00234' => 'bca', 'BcaNung01982' => 'bca', 'BcaNung03707' => 'bca', 'BcaNung06454' => 'bca', 'BolC2t10762H' => 'bol', 'BolC2t11191H' => 'bol', 'BolC3t14322H' => 'bol', 'BolC3t19747H' => 'bol', 'BolC3t21425H' => 'bol', 'BolC4t27800H' => 'bol', 'BolC5t31423H' => 'bol', 'BolC6t35951H' => 'bol', 'BolC6t36282H' => 'bol', 'BolC7t40678H' => 'bol', 'BolC7t40679H' => 'bol', 'BolC7t42222H' => 'bol', 'BolC7t43492H' => 'bol', 'BolC7t46785H' => 'bol', 'BolC8t47853H' => 'bol', 'BolC9t56805H' => 'bol', 'BraA02t08000Z' => 'bra', 'BraA02t08341Z' => 'bra', 'BraA03t10936Z' => 'bra', 'BraA03t15657Z' => 'bra', 'BraA04t18100Z' => 'bra', 'BraA05t20523Z' => 'bra', 'BraA06t23353Z' => 'bra', 'BraA06t27473Z' => 'bra', 'BraA06t27769Z' => 'bra', 'BraA07t28928Z' => 'bra', 'BraA08t32236Z' => 'bra', 'BraA08t32841Z' => 'bra', 'BraA08t34524Z' => 'bra', 'BraA09t38742Z' => 'bra', 'BraA09t39295Z' => 'bra', 'C02p47180' => 'bna', 'C02p50990' => 'bna', 'C03p19360' => 'bna', 'C03p74950' => 'bna', 'C03p91000' => 'bna', 'C04p63260' => 'bna', 'C05p27050' => 'bna', 'C06p08750' => 'bna', 'C06p11490' => 'bna', 'C07p02820' => 'bna', 'C07p17180' => 'bna', 'C07p29440' => 'bna', 'C07p63730' => 'bna', 'C09p39260' => 'bna', 'CAN.G1164.34' => 'can', 'CAN.G1164.39' => 'can', 'CAN.G1530.3' => 'can', 'CAN.G162.61' => 'can', 'CAN.G176.6' => 'can', 'CAN.G289.49' => 'can', 'CAN.G370.21' => 'can', 'CAN.G370.22' => 'can', 'CAN.G371.117' => 'can', 'CAN.G58.37' => 'can', 'CAN.G588.98' => 'can', 'CANSAT21G2266' => 'cansat', 'CANSAT25G2799' => 'cansat', 'CANSAT35G0862' => 'cansat', 'CANSAT35G1704' => 'cansat', 'CANSAT35G1760' => 'cansat', 'CANSAT56G3971' => 'cansat', 'CANSAT56G4116' => 'cansat', 'CANSAT80G1259' => 'cansat', 'CARHR027730' => 'chi', 'CARHR033880' => 'chi', 'CARHR043270' => 'chi', 'CARHR145330' => 'chi', 'CARHR145340' => 'chi', 'CARHR175570' => 'chi', 'CARHR181570' => 'chi', 'CARHR258470' => 'chi', 'CARHR260490' => 'chi', 'CARHR294220' => 'chi', 'Carub.0001s2668' => 'cru', 'Carub.0001s3257' => 'cru', 'Carub.0001s4220' => 'cru', 'Carub.0005s0179' => 'cru', 'Carub.0006s2807' => 'cru', 'Carub.0007s0039' => 'cru', 'Carub.0008s0169' => 'cru', 'Carub.0008s0636' => 'cru', 'Ca_00338_v3' => 'car', 'Ca_00542_v3' => 'car', 'Ca_01844_v3' => 'car', 'Ca_10611_v3' => 'car', 'Ca_13326_v3' => 'car', 'Ca_17944_v3' => 'car', 'Ca_18546_v3' => 'car', 'Ca_24219_v3' => 'car', 'Ca_29972_v3' => 'car', 'CBR_g3681' => 'cbr', 'CBR_g40021' => 'cbr', 'Cc01_g08140' => 'ccan', 'Cc02_g13410' => 'ccan', 'Cc02_g37480' => 'ccan', 'Cc05_g12030' => 'ccan', 'Cc09_g03370' => 'ccan', 'Cc09_g10300' => 'ccan', 'Cc10_g03530' => 'ccan', 'Cc10_g11380' => 'ccan', 'CDE01G0176' => 'cde', 'CDE02G0675' => 'cde', 'CDE02G0942' => 'cde', 'CDE02G1153' => 'cde', 'CDE02G4177' => 'cde', 'CDE04G2117' => 'cde', 'CDE04G2736' => 'cde', 'CDE08G1161' => 'cde', 'CDE09G1238' => 'cde', 'Cfa000467' => 'cfa', 'Cfa000947' => 'cfa', 'Cfa004969' => 'cfa', 'Cfa005284' => 'cfa', 'Cfa008993' => 'cfa', 'Cfa018187' => 'cfa', 'Cfa018454' => 'cfa', 'Cfa020585' => 'cfa', 'Ciclev10000424m.g' => 'ccl', 'Ciclev10003605m.g' => 'ccl', 'Ciclev10007828m.g' => 'ccl', 'Ciclev10014620m.g' => 'ccl', 'Ciclev10015169m.g' => 'ccl', 'Ciclev10018291m.g' => 'ccl', 'Ciclev10028256m.g' => 'ccl', 'Ciclev10033822m.g' => 'ccl', 'CiPaw.05G060300' => 'cil', 'CiPaw.05G085000' => 'cil', 'CiPaw.06G083700' => 'cil', 'CiPaw.06G120300' => 'cil', 'CiPaw.09G060500' => 'cil', 'CiPaw.09G123800' => 'cil', 'CiPaw.11G169700' => 'cil', 'CiPaw.12G118300' => 'cil', 'CiPaw.15G071000' => 'cil', 'CiPaw.15G081900' => 'cil', 'ClCG01G024610' => 'cla', 'ClCG03G006070' => 'cla', 'ClCG05G019250' => 'cla', 'ClCG09G009500' => 'cla', 'ClCG11G008200' => 'cla', 'ClCG11G018080' => 'cla', 'COL.COLO4_17373' => 'col', 'COL.COLO4_22994' => 'col', 'COL.COLO4_26389' => 'col', 'COL.COLO4_27170' => 'col', 'COL.COLO4_31074' => 'col', 'COL.COLO4_31465' => 'col', 'COL.COLO4_36438' => 'col', 'COL.COLO4_36439' => 'col', 'Cpa.g.c38781' => 'cpa', 'Cpa.g.sc128.12' => 'cpa', 'Cpa.g.sc166.7' => 'cpa', 'Cpa.g.sc166.8' => 'cpa', 'Cpa.g.sc20.111' => 'cpa', 'Cpa.g.sc27.31' => 'cpa', 'Cpa.g.sc64.36' => 'cpa', 'Cpa.g.sc64.37' => 'cpa', 'Cpa.g.sc66.49' => 'cpa', 'Cpa.g.sc80.64' => 'cpa', 'CsaV3_1G012320' => 'csa', 'CsaV3_2G008480' => 'csa', 'CsaV3_2G033450' => 'csa', 'CsaV3_3G044830' => 'csa', 'CsaV3_4G033710' => 'csa', 'CsaV3_6G051730' => 'csa', 'CsaV3_7G025350' => 'csa', 'CSS0001067' => 'camsi', 'CSS0005996' => 'camsi', 'CSS0006590' => 'camsi', 'CSS0009673' => 'camsi', 'CSS0010201' => 'camsi', 'CSS0010549' => 'camsi', 'CSS0011364' => 'camsi', 'CSS0014473' => 'camsi', 'CSS0014961' => 'camsi', 'CSS0020191' => 'camsi', 'CSS0021165' => 'camsi', 'CSS0022306' => 'camsi', 'CSS0030591' => 'camsi', 'CSS0030696' => 'camsi', 'CSS0032653' => 'camsi', 'CSS0037487' => 'camsi', 'CSS0041102' => 'camsi', 'CSS0041261' => 'camsi', 'CSS0046246' => 'camsi', 'CSS0049256' => 'camsi', 'DCAR_004075' => 'dca', 'DCAR_011538' => 'dca', 'DCAR_019553' => 'dca', 'DCAR_020952' => 'dca', 'DCAR_021739' => 'dca', 'DCAR_027407' => 'dca', 'DCAR_027913' => 'dca', 'DCAR_028066' => 'dca', 'Dinv05899' => 'din', 'Dinv07563' => 'din', 'Dinv08010' => 'din', 'Dinv14125' => 'din', 'Dinv20172' => 'din', 'Dinv30743' => 'din', 'Dinv31229' => 'din', 'Dinv34162' => 'din', 'Dinv36028' => 'din', 'Dinv39368' => 'din', 'Dinv40565' => 'din', 'Dinv41706' => 'din', 'Duzib052G0089' => 'dzi', 'Duzib116G0641' => 'dzi', 'Duzib132G0069' => 'dzi', 'Duzib132G1219' => 'dzi', 'Duzib147G0278' => 'dzi', 'Duzib160G0480' => 'dzi', 'Duzib170G0661' => 'dzi', 'Duzib177G0591' => 'dzi', 'Duzib187G1353' => 'dzi', 'Duzib192G0858' => 'dzi', 'Duzib192G0883' => 'dzi', 'Duzib213G0506' => 'dzi', 'Duzib235G0289' => 'dzi', 'Duzib251G0422' => 'dzi', 'ECA232G3898' => 'eca', 'ECA233G5950' => 'eca', 'ECA234G1699' => 'eca', 'ECA234G2421' => 'eca', 'ECA236G0426' => 'eca', 'ECA236G4331' => 'eca', 'ECA248G2573' => 'eca', 'EL10Ac1g00077' => 'bvu', 'EL10Ac1g01746' => 'bvu', 'EL10Ac2g03464' => 'bvu', 'EL10Ac4g08176' => 'bvu', 'EL10Ac7g17521' => 'bvu', 'EL10Ac8g20386' => 'bvu', 'EL10Ac9g21343' => 'bvu', 'EL10Ac9g22688' => 'bvu', 'Eucgr.B03434' => 'egr', 'Eucgr.D00618' => 'egr', 'Eucgr.E02395' => 'egr', 'Eucgr.F01129' => 'egr', 'Eucgr.F02622' => 'egr', 'Eucgr.F04207' => 'egr', 'FAN01G0570' => 'fan', 'FAN03G3351' => 'fan', 'FAN06G3702' => 'fan', 'FAN07G2149' => 'fan', 'FAN10G3758' => 'fan', 'FAN11G1170' => 'fan', 'FAN11G2050' => 'fan', 'FAN11G2724' => 'fan', 'FAN12G1700' => 'fan', 'FAN12G2028' => 'fan', 'FAN15G1160' => 'fan', 'FAN15G3063' => 'fan', 'FAN16G2540' => 'fan', 'FAN16G3077' => 'fan', 'FAN16G3624' => 'fan', 'FAN17G0221' => 'fan', 'FAN20G2492' => 'fan', 'FAN20G2905' => 'fan', 'FAN21G0548' => 'fan', 'FAN21G1300' => 'fan', 'FAN22G0077' => 'fan', 'FAN22G1315' => 'fan', 'FAN24G1280' => 'fan', 'FAN24G1445' => 'fan', 'FAN24G3527' => 'fan', 'FAN25G0464' => 'fan', 'FAN25G2885' => 'fan', 'FAN25G3270' => 'fan', 'FAN27G1101' => 'fan', 'FAN27G2846' => 'fan', 'FAN27G3524' => 'fan', 'FvH4_2g11770' => 'fve', 'FvH4_2g15630' => 'fve', 'FvH4_3g05570' => 'fve', 'FvH4_3g09110' => 'fve', 'FvH4_3g19940' => 'fve', 'FvH4_4g04821' => 'fve', 'FvH4_4g31480' => 'fve', 'FvH4_7g01740' => 'fve', 'Glyma.05G130400' => 'gma', 'Glyma.05G156400' => 'gma', 'Glyma.07G197000' => 'gma', 'Glyma.08G085151' => 'gma', 'Glyma.08G114500' => 'gma', 'Glyma.08G300400' => 'gma', 'Glyma.10G215800' => 'gma', 'Glyma.12G224400' => 'gma', 'Glyma.13G179300' => 'gma', 'Glyma.13G218151' => 'gma', 'Glyma.13G238800' => 'gma', 'Glyma.13G276900' => 'gma', 'Glyma.14G078200' => 'gma', 'Glyma.15G074500' => 'gma', 'Glyma.15G094100' => 'gma', 'Glyma.17G247200' => 'gma', 'Glyma.18G120100' => 'gma', 'Glyma.20G176000' => 'gma', 'Gohir.A01G063600' => 'ghi', 'Gohir.A01G170301' => 'ghi', 'Gohir.A02G060500' => 'ghi', 'Gohir.A05G133850' => 'ghi', 'Gohir.A05G161400' => 'ghi', 'Gohir.A06G012900' => 'ghi', 'Gohir.A06G035901' => 'ghi', 'Gohir.A06G127100' => 'ghi', 'Gohir.A06G210500' => 'ghi', 'Gohir.A08G008650' => 'ghi', 'Gohir.A09G072700' => 'ghi', 'Gohir.A09G088301' => 'ghi', 'Gohir.A10G040600' => 'ghi', 'Gohir.A12G036300' => 'ghi', 'Gohir.A12G143350' => 'ghi', 'Gohir.A12G165500' => 'ghi', 'Gohir.A13G145700' => 'ghi', 'Gohir.D01G050000' => 'ghi', 'Gohir.D01G051366' => 'ghi', 'Gohir.D01G161350' => 'ghi', 'Gohir.D02G065900' => 'ghi', 'Gohir.D05G164200' => 'ghi', 'Gohir.D05G355500' => 'ghi', 'Gohir.D06G010400' => 'ghi', 'Gohir.D06G111250' => 'ghi', 'Gohir.D06G132000' => 'ghi', 'Gohir.D06G210500' => 'ghi', 'Gohir.D07G165675' => 'ghi', 'Gohir.D08G062240' => 'ghi', 'Gohir.D08G086101' => 'ghi', 'Gohir.D08G138060' => 'ghi', 'Gohir.D09G072300' => 'ghi', 'Gohir.D10G041400' => 'ghi', 'Gohir.D11G191020' => 'ghi', 'Gohir.D11G212066' => 'ghi', 'Gohir.D12G036300' => 'ghi', 'Gohir.D12G168600' => 'ghi', 'Gohir.D13G150600' => 'ghi', 'Gorai.001G057300' => 'gra', 'Gorai.002G069900' => 'gra', 'Gorai.002G200000' => 'gra', 'Gorai.003G067600' => 'gra', 'Gorai.005G074800' => 'gra', 'Gorai.006G087300' => 'gra', 'Gorai.008G037500' => 'gra', 'Gorai.008G181400' => 'gra', 'Gorai.009G169400' => 'gra', 'Gorai.009G387900' => 'gra', 'Gorai.010G013300' => 'gra', 'Gorai.010G153800' => 'gra', 'Gorai.010G255800' => 'gra', 'Gorai.011G043700' => 'gra', 'Gorai.011G198900' => 'gra', 'Gorai.013G168400' => 'gra', 'GSVIVG01005212001' => 'vvi', 'GSVIVG01006163001' => 'vvi', 'GSVIVG01009625001' => 'vvi', 'GSVIVG01014338001' => 'vvi', 'GSVIVG01020005001' => 'vvi', 'GSVIVG01021450001' => 'vvi', 'GSVIVG01023975001' => 'vvi', 'GSVIVG01034490001' => 'vvi', 'HanXRQChr04g0112071' => 'han', 'HanXRQChr05g0131151' => 'han', 'HanXRQChr09g0262371' => 'han', 'HanXRQChr09g0268401' => 'han', 'HanXRQChr10g0279241' => 'han', 'HanXRQChr10g0297961' => 'han', 'HanXRQChr11g0326231' => 'han', 'HanXRQChr11g0328471' => 'han', 'HanXRQChr16g0507941' => 'han', 'HanXRQChr17g0560211' => 'han', 'Haze_02108' => 'cav', 'Haze_02428' => 'cav', 'Haze_05593' => 'cav', 'Haze_06448' => 'cav', 'Haze_09427' => 'cav', 'Haze_12022' => 'cav', 'Haze_17612' => 'cav', 'Haze_17928' => 'cav', 'Hma1.2p1_0032F.1_g019250' => 'hma', 'Hma1.2p1_0163F.1_g072690' => 'hma', 'Hma1.2p1_0265F.1_g106710' => 'hma', 'Hma1.2p1_0286F.1_g113970' => 'hma', 'Hma1.2p1_0363F.1_g136640' => 'hma', 'Hma1.2p1_0584F.1_g183470' => 'hma', 'Hma1.2p1_0885F.1_g232570' => 'hma', 'HPP92_006022' => 'vpl', 'HPP92_007320' => 'vpl', 'HPP92_011521' => 'vpl', 'HPP92_019387' => 'vpl', 'HPP92_024038' => 'vpl', 'Hund05891' => 'sun', 'Hund06450' => 'sun', 'Hund12053' => 'sun', 'Hund16800' => 'sun', 'Hund21222' => 'sun', 'Hund22896' => 'sun', 'Hund23746' => 'sun', 'Hund27083' => 'sun', 'Lalb_Chr02g0141831' => 'lal', 'Lalb_Chr02g0141841' => 'lal', 'Lalb_Chr05g0220411' => 'lal', 'Lalb_Chr06g0162081' => 'lal', 'Lalb_Chr09g0327651' => 'lal', 'Lalb_Chr13g0295051' => 'lal', 'Lalb_Chr15g0086801' => 'lal', 'Lalb_Chr16g0383781' => 'lal', 'Lalb_Chr16g0383791' => 'lal', 'Lalb_Chr18g0055441' => 'lal', 'Lalb_Chr18g0059611' => 'lal', 'Lalb_Chr20g0109661' => 'lal', 'Lalb_Chr20g0109831' => 'lal', 'Lalb_Chr20g0121871' => 'lal', 'Lalb_Chr22g0355361' => 'lal', 'Lalb_Chr25g0286371' => 'lal', 'Lj1A1187G43' => 'lonja', 'Lj1A1205T50' => 'lonja', 'Lj1A800G33' => 'lonja', 'Lj1C1187T7' => 'lonja', 'Lj1C843T11' => 'lonja', 'Lj1g0010940' => 'lja', 'Lj2A288T69' => 'lonja', 'Lj3g0024276' => 'lja', 'Lj4A47T76' => 'lonja', 'Lj4g0005805' => 'lja', 'Lj4g0006097' => 'lja', 'Lj4g0008528' => 'lja', 'Lj4g0024907' => 'lja', 'Lj5g0012472' => 'lja', 'Lj5g0018648' => 'lja', 'Lj6C789G1' => 'lonja', 'Lj6g0004000' => 'lja', 'Lj7A292G67' => 'lonja', 'Lj7A292T64' => 'lonja', 'Lj9A400T58' => 'lonja', 'Lsat_1_v5_gn_1_126181' => 'lsa', 'Lsat_1_v5_gn_4_123041' => 'lsa', 'Lsat_1_v5_gn_4_133620' => 'lsa', 'Lsat_1_v5_gn_4_53221' => 'lsa', 'Lsat_1_v5_gn_4_71961' => 'lsa', 'Lsat_1_v5_gn_7_105241' => 'lsa', 'Lsat_1_v5_gn_7_21361' => 'lsa', 'Lsat_1_v5_gn_7_28860' => 'lsa', 'Lsat_1_v5_gn_7_31260' => 'lsa', 'Lsat_1_v5_gn_8_52801' => 'lsa', 'Manes.02G191400' => 'mes', 'Manes.03G110100' => 'mes', 'Manes.04G071100' => 'mes', 'Manes.05G100500' => 'mes', 'Manes.05G164700' => 'mes', 'Manes.15G087000' => 'mes', 'Manes.15G121500' => 'mes', 'Manes.16G028300' => 'mes', 'Manes.17G046100' => 'mes', 'Manes.17G069800' => 'mes', 'Manes.18G100500' => 'mes', 'Mapoly0002s0109' => 'mpo', 'Mapoly0024s0007' => 'mpo', 'Mapoly0089s0032' => 'mpo', 'MBI04_g42241_MAGBIO' => 'mbi', 'MBI05_g11988_MAGBIO' => 'mbi', 'MBI05_g35452_MAGBIO' => 'mbi', 'MBI07_g30179_MAGBIO' => 'mbi', 'MBI07_g35859_MAGBIO' => 'mbi', 'MBI07_g35860_MAGBIO' => 'mbi', 'MBI07_g37166_MAGBIO' => 'mbi', 'MBI08_g18172_MAGBIO' => 'mbi', 'MBI09_g08441_MAGBIO' => 'mbi', 'MBI13_g01676_MAGBIO' => 'mbi', 'MBI14_g42955_MAGBIO' => 'mbi', 'MBI16_g13161_MAGBIO' => 'mbi', 'MBI17_g27204_MAGBIO' => 'mbi', 'MBI19_g21595_MAGBIO' => 'mbi', 'MD00G1148400' => 'mdo', 'MD02G1301200' => 'mdo', 'MD03G1227800' => 'mdo', 'MD05G1041100' => 'mdo', 'MD05G1124800' => 'mdo', 'MD05G1284000' => 'mdo', 'MD05G1338800' => 'mdo', 'MD05G1338900' => 'mdo', 'MD07G1022800' => 'mdo', 'MD10G1047500' => 'mdo', 'MD10G1127500' => 'mdo', 'MD10G1262300' => 'mdo', 'MD10G1293800' => 'mdo', 'MD16G1074300' => 'mdo', 'Medtr1g021670' => 'mtr', 'Medtr1g096320' => 'mtr', 'Medtr2g013690' => 'mtr', 'Medtr2g019450' => 'mtr', 'Medtr2g085170' => 'mtr', 'Medtr4g088785' => 'mtr', 'Medtr8g055930' => 'mtr', 'Medtr8g085850' => 'mtr', 'MELO3C002605.2' => 'cme', 'MELO3C003891.2' => 'cme', 'MELO3C004012.2' => 'cme', 'MELO3C007134.2' => 'cme', 'MELO3C008118.2' => 'cme', 'MELO3C016700.2' => 'cme', 'MELO3C024127.2' => 'cme', 'MELO3C033361.2' => 'cme', 'MELO3C033362.2' => 'cme', 'Migut.C00430' => 'egut', 'Migut.C01246' => 'egut', 'Migut.E00101' => 'egut', 'Migut.H01486' => 'egut', 'Migut.H01939' => 'egut', 'Migut.K00360' => 'egut', 'Migut.M00910' => 'egut', 'Migut.M01139' => 'egut', 'Migut.N02677' => 'egut', 'MSTRG.13252' => 'ama', 'MSTRG.14701' => 'ama', 'MSTRG.1521' => 'ama', 'MSTRG.15884' => 'ama', 'MSTRG.16242' => 'ama', 'MSTRG.22285' => 'ama', 'MSTRG.22444' => 'ama', 'MSTRG.2349' => 'ama', 'MSTRG.26308' => 'ama', 'MSTRG.28296' => 'ama', 'MSTRG.9895' => 'ama', 'Nitab4.5_0000110g0060' => 'nta', 'Nitab4.5_0000420g0130' => 'nta', 'Nitab4.5_0000422g0030' => 'nta', 'Nitab4.5_0000560g0180' => 'nta', 'Nitab4.5_0000703g0100' => 'nta', 'Nitab4.5_0000786g0200' => 'nta', 'Nitab4.5_0001336g0020' => 'nta', 'Nitab4.5_0001796g0030' => 'nta', 'Nitab4.5_0003348g0060' => 'nta', 'Nitab4.5_0003698g0040' => 'nta', 'Nitab4.5_0003942g0090' => 'nta', 'Nitab4.5_0004775g0070' => 'nta', 'Nitab4.5_0004864g0030' => 'nta', 'Nitab4.5_0005615g0020' => 'nta', 'Nitab4.5_0009288g0030' => 'nta', 'Nitab4.5_0009341g0010' => 'nta', 'Nitab4.5_0009535g0010' => 'nta', 'Nn1g03995' => 'nnu', 'Nn1g04100' => 'nnu', 'Nn1g06530' => 'nnu', 'Nn3g16404' => 'nnu', 'Nn3g17212' => 'nnu', 'Nn3g20776' => 'nnu', 'Nn3g21923' => 'nnu', 'Nn5g27737' => 'nnu', 'Nn5g29461' => 'nnu', 'Nn7g38355' => 'nnu', 'Nn8g39873' => 'nnu', 'Oeu000548.2' => 'oeu', 'Oeu004672.1' => 'oeu', 'Oeu015605.2' => 'oeu', 'Oeu016092.1' => 'oeu', 'Oeu017879.3' => 'oeu', 'Oeu024910.1' => 'oeu', 'Oeu028965.1' => 'oeu', 'Oeu031269.1' => 'oeu', 'Oeu031270.1' => 'oeu', 'Oeu032535.1' => 'oeu', 'Oeu034151.1' => 'oeu', 'Oeu034152.1' => 'oeu', 'Oeu034588.2' => 'oeu', 'Oeu050846.1' => 'oeu', 'Oeu050849.2' => 'oeu', 'Oeu051063.2' => 'oeu', 'Oeu052368.1' => 'oeu', 'Oeu052370.1' => 'oeu', 'Os01g0210400' => 'osa', 'Os01g0304300' => 'osa', 'Os01g0749100' => 'osa', 'Os02g0745800' => 'osa', 'Os03g0769050' => 'osa', 'Os05g0531500' => 'osa', 'Os06g0724300' => 'osa', 'Os11g0198100' => 'osa', 'Peaxi162Scf00069g01425' => 'pax', 'Peaxi162Scf00280g00811' => 'pax', 'Peaxi162Scf00310g00615' => 'pax', 'Peaxi162Scf00362g00542' => 'pax', 'Peaxi162Scf00461g00310' => 'pax', 'Peaxi162Scf00530g00118' => 'pax', 'Peaxi162Scf00541g00057' => 'pax', 'Peaxi162Scf00661g00017' => 'pax', 'Peaxi162Scf00926g00027' => 'pax', 'Peaxi162Scf01064g00263' => 'pax', 'Peaxi162Scf01211g00135' => 'pax', 'PGR004G2336' => 'pgr', 'PGR042G0327' => 'pgr', 'PGR042G1957' => 'pgr', 'PGR042G2003' => 'pgr', 'PGR042G3929' => 'pgr', 'PGR083G1137' => 'pgr', 'PGR083G1364' => 'pgr', 'PGSC0003DMG400003381' => 'stu', 'PGSC0003DMG400003417' => 'stu', 'PGSC0003DMG400008981' => 'stu', 'PGSC0003DMG400012417' => 'stu', 'PGSC0003DMG400012823' => 'stu', 'PGSC0003DMG400016885' => 'stu', 'PGSC0003DMG400022812' => 'stu', 'PGSC0003DMG400029726' => 'stu', 'PGSC0003DMG401009243' => 'stu', 'PGSC0003DMG401031505' => 'stu', 'PGSC0003DMG402031505' => 'stu', 'Phvul.001G017600' => 'pvu', 'Phvul.002G193500' => 'pvu', 'Phvul.002G228900' => 'pvu', 'Phvul.002G236800' => 'pvu', 'Phvul.003G049500' => 'pvu', 'Phvul.005G072000' => 'pvu', 'Phvul.006G164800' => 'pvu', 'Phvul.006G185100' => 'pvu', 'Phvul.007G090000' => 'pvu', 'Potri.001G399800' => 'ptr', 'Potri.002G149900' => 'ptr', 'Potri.004G044100' => 'ptr', 'Potri.004G177600' => 'ptr', 'Potri.009G138000' => 'ptr', 'Potri.010G094000' => 'ptr', 'Potri.011G053000' => 'ptr', 'Potri.011G119300' => 'ptr', 'Potri.013G113700' => 'ptr', 'Potri.018G107800' => 'ptr', 'Potri.019G084100' => 'ptr', 'Pp3c14_23720' => 'ppa', 'Pp3c16_6340' => 'ppa', 'Pp3c23_13420' => 'ppa', 'Pp3c24_2740' => 'ppa', 'Pp3c25_860' => 'ppa', 'Pp3c8_21750' => 'ppa', 'Prupe.1G273000' => 'ppe', 'Prupe.1G273700' => 'ppe', 'Prupe.1G274100' => 'ppe', 'Prupe.2G023300' => 'ppe', 'Prupe.4G048000' => 'ppe', 'Prupe.4G080400' => 'ppe', 'Prupe.4G181200' => 'ppe', 'Prupe.8G056900' => 'ppe', 'Prupe.8G168700' => 'ppe', 'Psat1g189080' => 'psa', 'Psat1g204760' => 'psa', 'Psat4g175560' => 'psa', 'Psat4g177720' => 'psa', 'Psat5g244240' => 'psa', 'Psat6g010720' => 'psa', 'Psat6g187200' => 'psa', 'Psat7g072040' => 'psa', 'PSO017G3501' => 'pso', 'PSO063G2148' => 'pso', 'PSO063G5608' => 'pso', 'PSO210G6392' => 'pso', 'PSO541G2319' => 'pso', 'PSO541G2836' => 'pso', 'PSO541G4012' => 'pso', 'PSO541G6253' => 'pso', 'PSO675G0580' => 'pso', 'PSO675G0856' => 'pso', 'PSO675G5635' => 'pso', 'PSO675G9157' => 'pso', 'PSO832G1660' => 'pso', 'PSO832G1969' => 'pso', 'QL02p007186' => 'qlo', 'QL02p033904' => 'qlo', 'QL03p064391' => 'qlo', 'QL05p040593' => 'qlo', 'QL05p058242' => 'qlo', 'QL08p021825' => 'qlo', 'QL11p004981' => 'qlo', 'RcHm_v2.0_Chr1g0318301' => 'rch', 'RcHm_v2.0_Chr4g0418501' => 'rch', 'RcHm_v2.0_Chr4g0439971' => 'rch', 'RcHm_v2.0_Chr5g0008541' => 'rch', 'RcHm_v2.0_Chr5g0014101' => 'rch', 'RcHm_v2.0_Chr5g0014131' => 'rch', 'RcHm_v2.0_Chr5g0033621' => 'rch', 'RcHm_v2.0_Chr6g0272041' => 'rch', 'RcHm_v2.0_Chr6g0278831' => 'rch', 'Rhsim02G0130400' => 'rsi', 'Rhsim02G0171100' => 'rsi', 'Rhsim05G0053000' => 'rsi', 'Rhsim05G0053100' => 'rsi', 'Rhsim06G0096500' => 'rsi', 'Rhsim06G0096600' => 'rsi', 'Rhsim06G0199100' => 'rsi', 'Rhsim12G0062300' => 'rsi', 'Rhsim12G0062800' => 'rsi', 'Sabra02G0118600' => 'sbr', 'Sabra04G0027300' => 'sbr', 'Sabra04G0119500' => 'sbr', 'Sabra08G0112500' => 'sbr', 'Sabra11G0036800' => 'sbr', 'Sabra11G0103800' => 'sbr', 'Sabra13G0096300' => 'sbr', 'Sabra16G0262300' => 'sbr', 'Sabra18G0091700' => 'sbr', 'Sabra19G0095400' => 'sbr', 'SalBow6G3080' => 'sbo', 'SalBow7G1157' => 'sbo', 'SalBow7G2123' => 'sbo', 'SalBow7G2285' => 'sbo', 'SalBow7G3537' => 'sbo', 'SalBow8G2947' => 'sbo', 'SalBow8G4463' => 'sbo', 'SalBow8G5466' => 'sbo', 'Sc01g0001750' => 'sci', 'Sc02g0006640' => 'sci', 'Sc02g0006670' => 'sci', 'Sc04g0008220' => 'sci', 'Sc05g0006190' => 'sci', 'Sc08g0002760' => 'sci', 'Sc17g0006170' => 'sci', 'Sc22g0002050' => 'sci', 'Sc23g0001190' => 'sci', 'Sc24g0000980' => 'sci', 'Sed0006245' => 'sed', 'Sed0007543' => 'sed', 'Sed0009411' => 'sed', 'Sed0010765' => 'sed', 'Sed0012944' => 'sed', 'Sed0014682' => 'sed', 'Sed0016174' => 'sed', 'Sed0016796' => 'sed', 'Sed0020317' => 'sed', 'Sed0021467' => 'sed', 'SEGI_01316' => 'sgi', 'SEGI_03374' => 'sgi', 'SEGI_16265' => 'sgi', 'SEGI_18569' => 'sgi', 'SEGI_20351' => 'sgi', 'SEGI_26395' => 'sgi', 'SEGI_29469' => 'sgi', 'SEGI_34771' => 'sgi', 'SEGI_36769' => 'sgi', 'SEGI_37139' => 'sgi', 'SGA_v2.0_scaffold100G29687' => 'sas', 'SGA_v2.0_scaffold118G32472' => 'sas', 'SGA_v2.0_scaffold14G07051' => 'sas', 'SGA_v2.0_scaffold183G39845' => 'sas', 'SGA_v2.0_scaffold1G00174' => 'sas', 'SGA_v2.0_scaffold22G09714' => 'sas', 'SGA_v2.0_scaffold333G48992' => 'sas', 'SGA_v2.0_scaffold46G17491' => 'sas', 'SGA_v2.0_scaffold49G18294' => 'sas', 'SGA_v2.0_scaffold63G21658' => 'sas', 'SHI01741' => 'shi', 'SHI05771' => 'shi', 'SHI18077' => 'shi', 'SHI20525' => 'shi', 'SHI20527' => 'shi', 'SHI20528' => 'shi', 'SMO172G0185' => 'smo', 'SMO198G0020' => 'smo', 'SMO351G0006' => 'smo', 'SMO356G0118' => 'smo', 'SMO358G0296' => 'smo', 'SMO367G0079' => 'smo', 'SMO367G1277' => 'smo', 'Solyc01g014220.3' => 'sly', 'Solyc01g111770.2' => 'sly', 'Solyc02g078180.3' => 'sly', 'Solyc03g006430.3' => 'sly', 'Solyc03g006456.1' => 'sly', 'Solyc03g079860.2' => 'sly', 'Solyc04g079770.3' => 'sly', 'Solyc05g007430.4' => 'sly', 'Solyc07g063150.3' => 'sly', 'Solyc08g016620.3' => 'sly', 'Solyc09g057590.3' => 'sly', 'Solyc09g057600.1' => 'sly', 'Solyc10g009050.3' => 'sly', 'Solyc11g017420.2' => 'sly', 'Sopen01g053810' => 'spe', 'Sopen02g023040' => 'spe', 'Sopen03g002440' => 'spe', 'Sopen04g033350' => 'spe', 'Sopen05g003310' => 'spe', 'Sopen07g004050' => 'spe', 'Sopen07g031340' => 'spe', 'Sopen08g006990' => 'spe', 'Sopen10g004830' => 'spe', 'Sopen11g009370' => 'spe', 'Sp1g24450' => 'spa', 'Sp1g29670' => 'spa', 'Sp1g39600' => 'spa', 'Sp2g11080' => 'spa', 'Sp2g13970' => 'spa', 'Sp4g16130' => 'spa', 'Sp6g13080' => 'spa', 'Sp7g37270' => 'spa', 'TAR371G0065' => 'tar', 'TAR376G0340' => 'tar', 'TAR376G0435' => 'tar', 'TAR381G0002' => 'tar', 'TAR381G1236' => 'tar', 'TAR624G0055' => 'tar', 'TAR624G0324' => 'tar', 'TAR624G0696' => 'tar', 'TAR624G0906' => 'tar', 'TAR625G0107' => 'tar', 'TAR626G0015' => 'tar', 'TAR626G1356' => 'tar', 'TAR627G0888' => 'tar', 'TAR628G0399' => 'tar', 'TAR628G1327' => 'tar', 'TAR629G2831' => 'tar', 'TAR629G2874' => 'tar', 'TAR633G1432' => 'tar', 'TAR633G2771' => 'tar', 'THA.LOC104803394' => 'tha', 'THA.LOC104805153' => 'tha', 'THA.LOC104806784' => 'tha', 'THA.LOC104810473' => 'tha', 'THA.LOC104813100' => 'tha', 'THA.LOC104814215' => 'tha', 'THA.LOC104815554' => 'tha', 'THA.LOC104820544' => 'tha', 'THA.LOC104824754' => 'tha', 'THA.LOC104827717' => 'tha', 'Thecc.02G031400' => 'tca', 'Thecc.02G055900' => 'tca', 'Thecc.02G350800' => 'tca', 'Thecc.06G150900' => 'tca', 'Thecc.06G186600' => 'tca', 'Thecc.07G089600' => 'tca', 'Thecc.08G020400' => 'tca', 'Thecc.08G182100' => 'tca', 'Thhalv10000873m.g' => 'esa', 'Thhalv10004185m.g' => 'esa', 'Thhalv10006981m.g' => 'esa', 'Thhalv10007204m.g' => 'esa', 'Thhalv10011374m.g' => 'esa', 'Thhalv10013482m.g' => 'esa', 'Thhalv10017801m.g' => 'esa', 'Thhalv10024983m.g' => 'esa', 'TPR.G12072' => 'tpr', 'TPR.G15769' => 'tpr', 'TPR.G16504' => 'tpr', 'TPR.G16506' => 'tpr', 'TPR.G24345' => 'tpr', 'TPR.G26666' => 'tpr', 'TPR.G27320' => 'tpr', 'TPR.G31819' => 'tpr', 'TPR.G38879' => 'tpr', 'TPR.G39015' => 'tpr', 'TPR.G8819' => 'tpr', 'TWI09G0924' => 'twi', 'TWI12G0811' => 'twi', 'TWI12G1294' => 'twi', 'TWI31G0150' => 'twi', 'TWI36G1262' => 'twi', 'TWI38G1287' => 'twi', 'TWI38G1633' => 'twi', 'TWI38G1982' => 'twi', 'TWI39G0116' => 'twi', 'TWI60G1011' => 'twi', 'TWI63G0171' => 'twi', 'TWI73G0839' => 'twi', 'TWI79G1511' => 'twi', 'unitig_0.g915' => 'ugi', 'unitig_0.g916' => 'ugi', 'unitig_21.g20219' => 'ugi', 'unitig_21.g20416' => 'ugi', 'unitig_578.g16132' => 'ugi', 'unitig_578.g16718' => 'ugi', 'unitig_62.g23481' => 'ugi', 'unitig_744.g24535' => 'ugi', 'unitig_749.g13525' => 'ugi', 'vmacro01248' => 'vma', 'vmacro02290' => 'vma', 'vmacro10946' => 'vma', 'vmacro11865' => 'vma', 'vmacro12493' => 'vma', 'vmacro17322' => 'vma', 'vmacro21599' => 'vma', 'vmacro23041' => 'vma', 'VMungo0251G0004' => 'vmu', 'VMungo0251G2639' => 'vmu', 'VMungo0251G2967' => 'vmu', 'VMungo0540G0864' => 'vmu', 'VMungo0540G1569' => 'vmu', 'VMungo0647G0317' => 'vmu', 'VMungo0720G1373' => 'vmu', 'VMungo0720G1508' => 'vmu', 'VMungo1080G0485' => 'vmu', 'VMungo1215G3177' => 'vmu', 'Zm00001eb112600' => 'zma', 'Zm00001eb120220' => 'zma', 'Zm00001eb153240' => 'zma', 'Zm00001eb168880' => 'zma', 'Zm00001eb213920' => 'zma', 'Zm00001eb228280' => 'zma', 'Zm00001eb254580' => 'zma', 'Zm00001eb272180' => 'zma', 'Zm00001eb293190' => 'zma', 'Zm00001eb322930' => 'zma', 'Zm00001eb353360' => 'zma', 'Zm00001eb353390' => 'zma', 'Zm00001eb353430' => 'zma', 'Zm00001eb353440' => 'zma', 'Zm00001eb353780' => 'zma' ) $gf_id = 'HOM05D000499' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000499' ) $data_identifier = 'HOM05D000499' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 29, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 12, 'amhyb' => (int) 8, 'aly' => (int) 12, 'aox' => (int) 9, 'arhy' => (int) 26, 'ath' => (int) 8, 'atr' => (int) 7, 'acertr' => (int) 10, 'cqu' => (int) 15, 'bca' => (int) 29, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 11, 'cansat' => (int) 8, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 9, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 8, 'cpa' => (int) 10, 'csa' => (int) 7, 'camsi' => (int) 20, 'dca' => (int) 8, 'din' => (int) 12, 'dzi' => (int) 14, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 6, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 38, 'gra' => (int) 16, 'vvi' => (int) 8, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 5, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 11, 'lja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 11, 'mpo' => (int) 3, 'mbi' => (int) 14, 'mdo' => (int) 14, 'mtr' => (int) 8, 'cme' => (int) 9, 'egut' => (int) 9, 'ama' => (int) 11, 'nta' => (int) 17, 'nnu' => (int) 11, 'oeu' => (int) 18, 'osa' => (int) 8, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 6, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 9, 'rsi' => (int) 9, 'sbr' => (int) 10, 'sbo' => (int) 8, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 10, 'sas' => (int) 10, 'shi' => (int) 6, 'smo' => (int) 7, 'sly' => (int) 14, 'spe' => (int) 10, 'spa' => (int) 8, 'tar' => (int) 19, 'tha' => (int) 10, 'tca' => (int) 8, 'esa' => (int) 8, 'tpr' => (int) 11, 'twi' => (int) 13, 'ugi' => (int) 9, 'vma' => (int) 8, 'vmu' => (int) 10, 'zma' => (int) 15 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb353780' $species_info = array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ) $local_species = 'col' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000499', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1066', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p29780' => 'bna', 'A02p33180' => 'bna', 'A03p16470' => 'bna', 'A03p66010' => 'bna', 'A04p25970' => 'bna', 'A06p01270' => 'bna', 'A06p46080' => 'bna', 'A07p11400' => 'bna', 'A08p01840' => 'bna', 'A08p08230' => 'bna', 'A08p25740' => 'bna', 'A09p32070' => 'bna', 'A09p37830' => 'bna', 'A09p42840' => 'bna', 'A09p42850' => 'bna', 'Aa31LG10G2060' => 'aar', 'Aa31LG2G7410' => 'aar', 'Aa31LG6G10200' => 'aar', 'Aa31LG6G16680' => 'aar', 'Aa31LG6G8470' => 'aar', 'Aa31LG9G12730' => 'aar', 'Aa31LG9G13680' => 'aar', 'Aa31LG9G14920' => 'aar', 'Aa31LG9G6650' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4977' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5467' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3254' => 'aag', 'Actinidia02578' => 'ach', 'Actinidia07693' => 'ach', 'Actinidia08413' => 'ach', 'Actinidia08414' => 'ach', 'Actinidia15289' => 'ach', 'Actinidia19871' => 'ach', 'Actinidia21475' => 'ach', 'Actinidia22576' => 'ach', 'Actinidia28327' => 'ach', 'Actinidia32491' => 'ach', 'Actinidia39463' => 'ach', 'Actinidia39571' => 'ach', 'Ah.01g013750' => 'amhyb', 'Ah.01g023210' => 'amhyb', 'Ah.04g164850' => 'amhyb', 'Ah.05g178060' => 'amhyb', 'Ah.07g204270' => 'amhyb', 'Ah.07g208480' => 'amhyb', 'Ah.09g237410' => 'amhyb', 'Ah.14g089460' => 'amhyb', 'AL1G41790' => 'aly', 'AL1G49050' => 'aly', 'AL1G53810' => 'aly', 'AL1G61400' => 'aly', 'AL4G18580' => 'aly', 'AL5G12510' => 'aly', 'AL5G12540' => 'aly', 'AL6G43230' => 'aly', 'AL7G10370' => 'aly', 'AL7G19250' => 'aly', 'AL8G12240' => 'aly', 'AL8G18540' => 'aly', 'Aqoxy1G02409' => 'aox', 'Aqoxy2G03993' => 'aox', 'Aqoxy3G03357' => 'aox', 'Aqoxy4G00785' => 'aox', 'Aqoxy5G02598' => 'aox', 'Aqoxy6G00132' => 'aox', 'Aqoxy7G01776' => 'aox', 'Aqoxy7G02316' => 'aox', 'Aqoxy7G03973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.12AFKW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B8730' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27IQR1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3F75VG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3RE0GA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41TCQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.527VTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FIR39' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5W8UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DA38EV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ63HS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H1I32C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HC27T5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4M8AP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7N3CZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9UVDZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LS1NQA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT1D4B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SKC4TM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCFV76' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF9Q1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQWD9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1ZM88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WE07RT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YCK7VH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJE6Q6' => 'arhy', 'AT1G28240' => 'ath', 'AT1G34550' => 'ath', 'AT1G53040' => 'ath', 'AT2G02910' => 'ath', 'AT4G09630' => 'ath', 'AT4G38500' => 'ath', 'AT5G42660' => 'ath', 'AT5G46220' => 'ath', 'ATR0152G026' => 'atr', 'ATR0564G343' => 'atr', 'ATR0706G151' => 'atr', 'ATR0733G207' => 'atr', 'ATR0751G234' => 'atr', 'ATR0807G048' => 'atr', 'ATR1091G084' => 'atr', 'Atru.chr10.1229' => 'acertr', 'Atru.chr10.1230' => 'acertr', 'Atru.chr10.1874' => 'acertr', 'Atru.chr11.1808' => 'acertr', 'Atru.chr13.1795' => 'acertr', 'Atru.chr13.570' => 'acertr', 'Atru.chr2.2608' => 'acertr', 'Atru.chr2.2609' => 'acertr', 'Atru.chr5.3428' => 'acertr', 'Atru.chr8.1171' => 'acertr', 'AUR62004651' => 'cqu', 'AUR62008675' => 'cqu', 'AUR62010014' => 'cqu', 'AUR62013004' => 'cqu', 'AUR62014825' => 'cqu', 'AUR62015015' => 'cqu', 'AUR62015151' => 'cqu', 'AUR62017020' => 'cqu', 'AUR62019422' => 'cqu', 'AUR62023570' => 'cqu', 'AUR62025571' => 'cqu', 'AUR62029098' => 'cqu', 'AUR62033863' => 'cqu', 'AUR62034296' => 'cqu', 'AUR62040075' => 'cqu', 'BcaB02g07334' => 'bca', 'BcaB02g10575' => 'bca', 'BcaB03g12119' => 'bca', 'BcaB03g12120' => 'bca', 'BcaB03g13945' => 'bca', 'BcaB04g17123' => 'bca', 'BcaB04g17867' => 'bca', 'BcaB04g19839' => 'bca', 'BcaB07g30317' => 'bca', 'BcaB07g32432' => 'bca', 'BcaB07g33362' => 'bca', 'BcaB08g36611' => 'bca', 'BcaC01g00028' => 'bca', 'BcaC01g01356' => 'bca', 'BcaC01g02034' => 'bca', 'BcaC01g06051' => 'bca', 'BcaC03g16839' => 'bca', 'BcaC03g17176' => 'bca', 'BcaC05g26829' => 'bca', 'BcaC06g31490' => 'bca', 'BcaC06g35344' => 'bca', 'BcaC06g36570' => 'bca', 'BcaC07g37537' => 'bca', 'BcaC08g43491' => 'bca', 'BcaC08g43773' => 'bca', 'BcaNung00234' => 'bca', 'BcaNung01982' => 'bca', 'BcaNung03707' => 'bca', 'BcaNung06454' => 'bca', 'BolC2t10762H' => 'bol', 'BolC2t11191H' => 'bol', 'BolC3t14322H' => 'bol', 'BolC3t19747H' => 'bol', 'BolC3t21425H' => 'bol', 'BolC4t27800H' => 'bol', 'BolC5t31423H' => 'bol', 'BolC6t35951H' => 'bol', 'BolC6t36282H' => 'bol', 'BolC7t40678H' => 'bol', 'BolC7t40679H' => 'bol', 'BolC7t42222H' => 'bol', 'BolC7t43492H' => 'bol', 'BolC7t46785H' => 'bol', 'BolC8t47853H' => 'bol', 'BolC9t56805H' => 'bol', 'BraA02t08000Z' => 'bra', 'BraA02t08341Z' => 'bra', 'BraA03t10936Z' => 'bra', 'BraA03t15657Z' => 'bra', 'BraA04t18100Z' => 'bra', 'BraA05t20523Z' => 'bra', 'BraA06t23353Z' => 'bra', 'BraA06t27473Z' => 'bra', 'BraA06t27769Z' => 'bra', 'BraA07t28928Z' => 'bra', 'BraA08t32236Z' => 'bra', 'BraA08t32841Z' => 'bra', 'BraA08t34524Z' => 'bra', 'BraA09t38742Z' => 'bra', 'BraA09t39295Z' => 'bra', 'C02p47180' => 'bna', 'C02p50990' => 'bna', 'C03p19360' => 'bna', 'C03p74950' => 'bna', 'C03p91000' => 'bna', 'C04p63260' => 'bna', 'C05p27050' => 'bna', 'C06p08750' => 'bna', 'C06p11490' => 'bna', 'C07p02820' => 'bna', 'C07p17180' => 'bna', 'C07p29440' => 'bna', 'C07p63730' => 'bna', 'C09p39260' => 'bna', 'CAN.G1164.34' => 'can', 'CAN.G1164.39' => 'can', 'CAN.G1530.3' => 'can', 'CAN.G162.61' => 'can', 'CAN.G176.6' => 'can', 'CAN.G289.49' => 'can', 'CAN.G370.21' => 'can', 'CAN.G370.22' => 'can', 'CAN.G371.117' => 'can', 'CAN.G58.37' => 'can', 'CAN.G588.98' => 'can', 'CANSAT21G2266' => 'cansat', 'CANSAT25G2799' => 'cansat', 'CANSAT35G0862' => 'cansat', 'CANSAT35G1704' => 'cansat', 'CANSAT35G1760' => 'cansat', 'CANSAT56G3971' => 'cansat', 'CANSAT56G4116' => 'cansat', 'CANSAT80G1259' => 'cansat', 'CARHR027730' => 'chi', 'CARHR033880' => 'chi', 'CARHR043270' => 'chi', 'CARHR145330' => 'chi', 'CARHR145340' => 'chi', 'CARHR175570' => 'chi', 'CARHR181570' => 'chi', 'CARHR258470' => 'chi', 'CARHR260490' => 'chi', 'CARHR294220' => 'chi', 'Carub.0001s2668' => 'cru', 'Carub.0001s3257' => 'cru', 'Carub.0001s4220' => 'cru', 'Carub.0005s0179' => 'cru', 'Carub.0006s2807' => 'cru', 'Carub.0007s0039' => 'cru', 'Carub.0008s0169' => 'cru', 'Carub.0008s0636' => 'cru', 'Ca_00338_v3' => 'car', 'Ca_00542_v3' => 'car', 'Ca_01844_v3' => 'car', 'Ca_10611_v3' => 'car', 'Ca_13326_v3' => 'car', 'Ca_17944_v3' => 'car', 'Ca_18546_v3' => 'car', 'Ca_24219_v3' => 'car', 'Ca_29972_v3' => 'car', 'CBR_g3681' => 'cbr', 'CBR_g40021' => 'cbr', 'Cc01_g08140' => 'ccan', 'Cc02_g13410' => 'ccan', 'Cc02_g37480' => 'ccan', 'Cc05_g12030' => 'ccan', 'Cc09_g03370' => 'ccan', 'Cc09_g10300' => 'ccan', 'Cc10_g03530' => 'ccan', 'Cc10_g11380' => 'ccan', 'CDE01G0176' => 'cde', 'CDE02G0675' => 'cde', 'CDE02G0942' => 'cde', 'CDE02G1153' => 'cde', 'CDE02G4177' => 'cde', 'CDE04G2117' => 'cde', 'CDE04G2736' => 'cde', 'CDE08G1161' => 'cde', 'CDE09G1238' => 'cde', 'Cfa000467' => 'cfa', 'Cfa000947' => 'cfa', 'Cfa004969' => 'cfa', 'Cfa005284' => 'cfa', 'Cfa008993' => 'cfa', 'Cfa018187' => 'cfa', 'Cfa018454' => 'cfa', 'Cfa020585' => 'cfa', 'Ciclev10000424m.g' => 'ccl', 'Ciclev10003605m.g' => 'ccl', 'Ciclev10007828m.g' => 'ccl', 'Ciclev10014620m.g' => 'ccl', 'Ciclev10015169m.g' => 'ccl', 'Ciclev10018291m.g' => 'ccl', 'Ciclev10028256m.g' => 'ccl', 'Ciclev10033822m.g' => 'ccl', 'CiPaw.05G060300' => 'cil', 'CiPaw.05G085000' => 'cil', 'CiPaw.06G083700' => 'cil', 'CiPaw.06G120300' => 'cil', 'CiPaw.09G060500' => 'cil', 'CiPaw.09G123800' => 'cil', 'CiPaw.11G169700' => 'cil', 'CiPaw.12G118300' => 'cil', 'CiPaw.15G071000' => 'cil', 'CiPaw.15G081900' => 'cil', 'ClCG01G024610' => 'cla', 'ClCG03G006070' => 'cla', 'ClCG05G019250' => 'cla', 'ClCG09G009500' => 'cla', 'ClCG11G008200' => 'cla', 'ClCG11G018080' => 'cla', 'COL.COLO4_17373' => 'col', 'COL.COLO4_22994' => 'col', 'COL.COLO4_26389' => 'col', 'COL.COLO4_27170' => 'col', 'COL.COLO4_31074' => 'col', 'COL.COLO4_31465' => 'col', 'COL.COLO4_36438' => 'col', 'COL.COLO4_36439' => 'col', 'Cpa.g.c38781' => 'cpa', 'Cpa.g.sc128.12' => 'cpa', 'Cpa.g.sc166.7' => 'cpa', 'Cpa.g.sc166.8' => 'cpa', 'Cpa.g.sc20.111' => 'cpa', 'Cpa.g.sc27.31' => 'cpa', 'Cpa.g.sc64.36' => 'cpa', 'Cpa.g.sc64.37' => 'cpa', 'Cpa.g.sc66.49' => 'cpa', 'Cpa.g.sc80.64' => 'cpa', 'CsaV3_1G012320' => 'csa', 'CsaV3_2G008480' => 'csa', 'CsaV3_2G033450' => 'csa', 'CsaV3_3G044830' => 'csa', 'CsaV3_4G033710' => 'csa', 'CsaV3_6G051730' => 'csa', 'CsaV3_7G025350' => 'csa', 'CSS0001067' => 'camsi', 'CSS0005996' => 'camsi', 'CSS0006590' => 'camsi', 'CSS0009673' => 'camsi', 'CSS0010201' => 'camsi', 'CSS0010549' => 'camsi', 'CSS0011364' => 'camsi', 'CSS0014473' => 'camsi', 'CSS0014961' => 'camsi', 'CSS0020191' => 'camsi', 'CSS0021165' => 'camsi', 'CSS0022306' => 'camsi', 'CSS0030591' => 'camsi', 'CSS0030696' => 'camsi', 'CSS0032653' => 'camsi', 'CSS0037487' => 'camsi', 'CSS0041102' => 'camsi', 'CSS0041261' => 'camsi', 'CSS0046246' => 'camsi', 'CSS0049256' => 'camsi', 'DCAR_004075' => 'dca', 'DCAR_011538' => 'dca', 'DCAR_019553' => 'dca', 'DCAR_020952' => 'dca', 'DCAR_021739' => 'dca', 'DCAR_027407' => 'dca', 'DCAR_027913' => 'dca', 'DCAR_028066' => 'dca', 'Dinv05899' => 'din', 'Dinv07563' => 'din', 'Dinv08010' => 'din', 'Dinv14125' => 'din', 'Dinv20172' => 'din', 'Dinv30743' => 'din', 'Dinv31229' => 'din', 'Dinv34162' => 'din', 'Dinv36028' => 'din', 'Dinv39368' => 'din', 'Dinv40565' => 'din', 'Dinv41706' => 'din', 'Duzib052G0089' => 'dzi', 'Duzib116G0641' => 'dzi', 'Duzib132G0069' => 'dzi', 'Duzib132G1219' => 'dzi', 'Duzib147G0278' => 'dzi', 'Duzib160G0480' => 'dzi', 'Duzib170G0661' => 'dzi', 'Duzib177G0591' => 'dzi', 'Duzib187G1353' => 'dzi', 'Duzib192G0858' => 'dzi', 'Duzib192G0883' => 'dzi', 'Duzib213G0506' => 'dzi', 'Duzib235G0289' => 'dzi', 'Duzib251G0422' => 'dzi', 'ECA232G3898' => 'eca', 'ECA233G5950' => 'eca', 'ECA234G1699' => 'eca', 'ECA234G2421' => 'eca', 'ECA236G0426' => 'eca', 'ECA236G4331' => 'eca', 'ECA248G2573' => 'eca', 'EL10Ac1g00077' => 'bvu', 'EL10Ac1g01746' => 'bvu', 'EL10Ac2g03464' => 'bvu', 'EL10Ac4g08176' => 'bvu', 'EL10Ac7g17521' => 'bvu', 'EL10Ac8g20386' => 'bvu', 'EL10Ac9g21343' => 'bvu', 'EL10Ac9g22688' => 'bvu', 'Eucgr.B03434' => 'egr', 'Eucgr.D00618' => 'egr', 'Eucgr.E02395' => 'egr', 'Eucgr.F01129' => 'egr', 'Eucgr.F02622' => 'egr', 'Eucgr.F04207' => 'egr', 'FAN01G0570' => 'fan', 'FAN03G3351' => 'fan', 'FAN06G3702' => 'fan', 'FAN07G2149' => 'fan', 'FAN10G3758' => 'fan', 'FAN11G1170' => 'fan', 'FAN11G2050' => 'fan', 'FAN11G2724' => 'fan', 'FAN12G1700' => 'fan', 'FAN12G2028' => 'fan', 'FAN15G1160' => 'fan', 'FAN15G3063' => 'fan', 'FAN16G2540' => 'fan', 'FAN16G3077' => 'fan', 'FAN16G3624' => 'fan', 'FAN17G0221' => 'fan', 'FAN20G2492' => 'fan', 'FAN20G2905' => 'fan', 'FAN21G0548' => 'fan', 'FAN21G1300' => 'fan', 'FAN22G0077' => 'fan', 'FAN22G1315' => 'fan', 'FAN24G1280' => 'fan', 'FAN24G1445' => 'fan', 'FAN24G3527' => 'fan', 'FAN25G0464' => 'fan', 'FAN25G2885' => 'fan', 'FAN25G3270' => 'fan', 'FAN27G1101' => 'fan', 'FAN27G2846' => 'fan', 'FAN27G3524' => 'fan', 'FvH4_2g11770' => 'fve', 'FvH4_2g15630' => 'fve', 'FvH4_3g05570' => 'fve', 'FvH4_3g09110' => 'fve', 'FvH4_3g19940' => 'fve', 'FvH4_4g04821' => 'fve', 'FvH4_4g31480' => 'fve', 'FvH4_7g01740' => 'fve', 'Glyma.05G130400' => 'gma', 'Glyma.05G156400' => 'gma', 'Glyma.07G197000' => 'gma', 'Glyma.08G085151' => 'gma', 'Glyma.08G114500' => 'gma', 'Glyma.08G300400' => 'gma', 'Glyma.10G215800' => 'gma', 'Glyma.12G224400' => 'gma', 'Glyma.13G179300' => 'gma', 'Glyma.13G218151' => 'gma', 'Glyma.13G238800' => 'gma', 'Glyma.13G276900' => 'gma', 'Glyma.14G078200' => 'gma', 'Glyma.15G074500' => 'gma', 'Glyma.15G094100' => 'gma', 'Glyma.17G247200' => 'gma', 'Glyma.18G120100' => 'gma', 'Glyma.20G176000' => 'gma', 'Gohir.A01G063600' => 'ghi', 'Gohir.A01G170301' => 'ghi', 'Gohir.A02G060500' => 'ghi', 'Gohir.A05G133850' => 'ghi', 'Gohir.A05G161400' => 'ghi', 'Gohir.A06G012900' => 'ghi', 'Gohir.A06G035901' => 'ghi', 'Gohir.A06G127100' => 'ghi', 'Gohir.A06G210500' => 'ghi', 'Gohir.A08G008650' => 'ghi', 'Gohir.A09G072700' => 'ghi', 'Gohir.A09G088301' => 'ghi', 'Gohir.A10G040600' => 'ghi', 'Gohir.A12G036300' => 'ghi', 'Gohir.A12G143350' => 'ghi', 'Gohir.A12G165500' => 'ghi', 'Gohir.A13G145700' => 'ghi', 'Gohir.D01G050000' => 'ghi', 'Gohir.D01G051366' => 'ghi', 'Gohir.D01G161350' => 'ghi', 'Gohir.D02G065900' => 'ghi', 'Gohir.D05G164200' => 'ghi', 'Gohir.D05G355500' => 'ghi', 'Gohir.D06G010400' => 'ghi', 'Gohir.D06G111250' => 'ghi', 'Gohir.D06G132000' => 'ghi', 'Gohir.D06G210500' => 'ghi', 'Gohir.D07G165675' => 'ghi', 'Gohir.D08G062240' => 'ghi', 'Gohir.D08G086101' => 'ghi', 'Gohir.D08G138060' => 'ghi', 'Gohir.D09G072300' => 'ghi', 'Gohir.D10G041400' => 'ghi', 'Gohir.D11G191020' => 'ghi', 'Gohir.D11G212066' => 'ghi', 'Gohir.D12G036300' => 'ghi', 'Gohir.D12G168600' => 'ghi', 'Gohir.D13G150600' => 'ghi', 'Gorai.001G057300' => 'gra', 'Gorai.002G069900' => 'gra', 'Gorai.002G200000' => 'gra', 'Gorai.003G067600' => 'gra', 'Gorai.005G074800' => 'gra', 'Gorai.006G087300' => 'gra', 'Gorai.008G037500' => 'gra', 'Gorai.008G181400' => 'gra', 'Gorai.009G169400' => 'gra', 'Gorai.009G387900' => 'gra', 'Gorai.010G013300' => 'gra', 'Gorai.010G153800' => 'gra', 'Gorai.010G255800' => 'gra', 'Gorai.011G043700' => 'gra', 'Gorai.011G198900' => 'gra', 'Gorai.013G168400' => 'gra', 'GSVIVG01005212001' => 'vvi', 'GSVIVG01006163001' => 'vvi', 'GSVIVG01009625001' => 'vvi', 'GSVIVG01014338001' => 'vvi', 'GSVIVG01020005001' => 'vvi', 'GSVIVG01021450001' => 'vvi', 'GSVIVG01023975001' => 'vvi', 'GSVIVG01034490001' => 'vvi', 'HanXRQChr04g0112071' => 'han', 'HanXRQChr05g0131151' => 'han', 'HanXRQChr09g0262371' => 'han', 'HanXRQChr09g0268401' => 'han', 'HanXRQChr10g0279241' => 'han', 'HanXRQChr10g0297961' => 'han', 'HanXRQChr11g0326231' => 'han', 'HanXRQChr11g0328471' => 'han', 'HanXRQChr16g0507941' => 'han', 'HanXRQChr17g0560211' => 'han', 'Haze_02108' => 'cav', 'Haze_02428' => 'cav', 'Haze_05593' => 'cav', 'Haze_06448' => 'cav', 'Haze_09427' => 'cav', 'Haze_12022' => 'cav', 'Haze_17612' => 'cav', 'Haze_17928' => 'cav', 'Hma1.2p1_0032F.1_g019250' => 'hma', 'Hma1.2p1_0163F.1_g072690' => 'hma', 'Hma1.2p1_0265F.1_g106710' => 'hma', 'Hma1.2p1_0286F.1_g113970' => 'hma', 'Hma1.2p1_0363F.1_g136640' => 'hma', 'Hma1.2p1_0584F.1_g183470' => 'hma', 'Hma1.2p1_0885F.1_g232570' => 'hma', 'HPP92_006022' => 'vpl', 'HPP92_007320' => 'vpl', 'HPP92_011521' => 'vpl', 'HPP92_019387' => 'vpl', 'HPP92_024038' => 'vpl', 'Hund05891' => 'sun', 'Hund06450' => 'sun', 'Hund12053' => 'sun', 'Hund16800' => 'sun', 'Hund21222' => 'sun', 'Hund22896' => 'sun', 'Hund23746' => 'sun', 'Hund27083' => 'sun', 'Lalb_Chr02g0141831' => 'lal', 'Lalb_Chr02g0141841' => 'lal', 'Lalb_Chr05g0220411' => 'lal', 'Lalb_Chr06g0162081' => 'lal', 'Lalb_Chr09g0327651' => 'lal', 'Lalb_Chr13g0295051' => 'lal', 'Lalb_Chr15g0086801' => 'lal', 'Lalb_Chr16g0383781' => 'lal', 'Lalb_Chr16g0383791' => 'lal', 'Lalb_Chr18g0055441' => 'lal', 'Lalb_Chr18g0059611' => 'lal', 'Lalb_Chr20g0109661' => 'lal', 'Lalb_Chr20g0109831' => 'lal', 'Lalb_Chr20g0121871' => 'lal', 'Lalb_Chr22g0355361' => 'lal', 'Lalb_Chr25g0286371' => 'lal', 'Lj1A1187G43' => 'lonja', 'Lj1A1205T50' => 'lonja', 'Lj1A800G33' => 'lonja', 'Lj1C1187T7' => 'lonja', 'Lj1C843T11' => 'lonja', 'Lj1g0010940' => 'lja', 'Lj2A288T69' => 'lonja', 'Lj3g0024276' => 'lja', 'Lj4A47T76' => 'lonja', 'Lj4g0005805' => 'lja', 'Lj4g0006097' => 'lja', 'Lj4g0008528' => 'lja', 'Lj4g0024907' => 'lja', 'Lj5g0012472' => 'lja', 'Lj5g0018648' => 'lja', 'Lj6C789G1' => 'lonja', 'Lj6g0004000' => 'lja', 'Lj7A292G67' => 'lonja', 'Lj7A292T64' => 'lonja', 'Lj9A400T58' => 'lonja', 'Lsat_1_v5_gn_1_126181' => 'lsa', 'Lsat_1_v5_gn_4_123041' => 'lsa', 'Lsat_1_v5_gn_4_133620' => 'lsa', 'Lsat_1_v5_gn_4_53221' => 'lsa', 'Lsat_1_v5_gn_4_71961' => 'lsa', 'Lsat_1_v5_gn_7_105241' => 'lsa', 'Lsat_1_v5_gn_7_21361' => 'lsa', 'Lsat_1_v5_gn_7_28860' => 'lsa', 'Lsat_1_v5_gn_7_31260' => 'lsa', 'Lsat_1_v5_gn_8_52801' => 'lsa', 'Manes.02G191400' => 'mes', 'Manes.03G110100' => 'mes', 'Manes.04G071100' => 'mes', 'Manes.05G100500' => 'mes', 'Manes.05G164700' => 'mes', 'Manes.15G087000' => 'mes', 'Manes.15G121500' => 'mes', 'Manes.16G028300' => 'mes', 'Manes.17G046100' => 'mes', 'Manes.17G069800' => 'mes', 'Manes.18G100500' => 'mes', 'Mapoly0002s0109' => 'mpo', 'Mapoly0024s0007' => 'mpo', 'Mapoly0089s0032' => 'mpo', 'MBI04_g42241_MAGBIO' => 'mbi', 'MBI05_g11988_MAGBIO' => 'mbi', 'MBI05_g35452_MAGBIO' => 'mbi', 'MBI07_g30179_MAGBIO' => 'mbi', 'MBI07_g35859_MAGBIO' => 'mbi', 'MBI07_g35860_MAGBIO' => 'mbi', 'MBI07_g37166_MAGBIO' => 'mbi', 'MBI08_g18172_MAGBIO' => 'mbi', 'MBI09_g08441_MAGBIO' => 'mbi', 'MBI13_g01676_MAGBIO' => 'mbi', 'MBI14_g42955_MAGBIO' => 'mbi', 'MBI16_g13161_MAGBIO' => 'mbi', 'MBI17_g27204_MAGBIO' => 'mbi', 'MBI19_g21595_MAGBIO' => 'mbi', 'MD00G1148400' => 'mdo', 'MD02G1301200' => 'mdo', 'MD03G1227800' => 'mdo', 'MD05G1041100' => 'mdo', 'MD05G1124800' => 'mdo', 'MD05G1284000' => 'mdo', 'MD05G1338800' => 'mdo', 'MD05G1338900' => 'mdo', 'MD07G1022800' => 'mdo', 'MD10G1047500' => 'mdo', 'MD10G1127500' => 'mdo', 'MD10G1262300' => 'mdo', 'MD10G1293800' => 'mdo', 'MD16G1074300' => 'mdo', 'Medtr1g021670' => 'mtr', 'Medtr1g096320' => 'mtr', 'Medtr2g013690' => 'mtr', 'Medtr2g019450' => 'mtr', 'Medtr2g085170' => 'mtr', 'Medtr4g088785' => 'mtr', 'Medtr8g055930' => 'mtr', 'Medtr8g085850' => 'mtr', 'MELO3C002605.2' => 'cme', 'MELO3C003891.2' => 'cme', 'MELO3C004012.2' => 'cme', 'MELO3C007134.2' => 'cme', 'MELO3C008118.2' => 'cme', 'MELO3C016700.2' => 'cme', 'MELO3C024127.2' => 'cme', 'MELO3C033361.2' => 'cme', 'MELO3C033362.2' => 'cme', 'Migut.C00430' => 'egut', 'Migut.C01246' => 'egut', 'Migut.E00101' => 'egut', 'Migut.H01486' => 'egut', 'Migut.H01939' => 'egut', 'Migut.K00360' => 'egut', 'Migut.M00910' => 'egut', 'Migut.M01139' => 'egut', 'Migut.N02677' => 'egut', 'MSTRG.13252' => 'ama', 'MSTRG.14701' => 'ama', 'MSTRG.1521' => 'ama', 'MSTRG.15884' => 'ama', 'MSTRG.16242' => 'ama', 'MSTRG.22285' => 'ama', 'MSTRG.22444' => 'ama', 'MSTRG.2349' => 'ama', 'MSTRG.26308' => 'ama', 'MSTRG.28296' => 'ama', 'MSTRG.9895' => 'ama', 'Nitab4.5_0000110g0060' => 'nta', 'Nitab4.5_0000420g0130' => 'nta', 'Nitab4.5_0000422g0030' => 'nta', 'Nitab4.5_0000560g0180' => 'nta', 'Nitab4.5_0000703g0100' => 'nta', 'Nitab4.5_0000786g0200' => 'nta', 'Nitab4.5_0001336g0020' => 'nta', 'Nitab4.5_0001796g0030' => 'nta', 'Nitab4.5_0003348g0060' => 'nta', 'Nitab4.5_0003698g0040' => 'nta', 'Nitab4.5_0003942g0090' => 'nta', 'Nitab4.5_0004775g0070' => 'nta', 'Nitab4.5_0004864g0030' => 'nta', 'Nitab4.5_0005615g0020' => 'nta', 'Nitab4.5_0009288g0030' => 'nta', 'Nitab4.5_0009341g0010' => 'nta', 'Nitab4.5_0009535g0010' => 'nta', 'Nn1g03995' => 'nnu', 'Nn1g04100' => 'nnu', 'Nn1g06530' => 'nnu', 'Nn3g16404' => 'nnu', 'Nn3g17212' => 'nnu', 'Nn3g20776' => 'nnu', 'Nn3g21923' => 'nnu', 'Nn5g27737' => 'nnu', 'Nn5g29461' => 'nnu', 'Nn7g38355' => 'nnu', 'Nn8g39873' => 'nnu', 'Oeu000548.2' => 'oeu', 'Oeu004672.1' => 'oeu', 'Oeu015605.2' => 'oeu', 'Oeu016092.1' => 'oeu', 'Oeu017879.3' => 'oeu', 'Oeu024910.1' => 'oeu', 'Oeu028965.1' => 'oeu', 'Oeu031269.1' => 'oeu', 'Oeu031270.1' => 'oeu', 'Oeu032535.1' => 'oeu', 'Oeu034151.1' => 'oeu', 'Oeu034152.1' => 'oeu', 'Oeu034588.2' => 'oeu', 'Oeu050846.1' => 'oeu', 'Oeu050849.2' => 'oeu', 'Oeu051063.2' => 'oeu', 'Oeu052368.1' => 'oeu', 'Oeu052370.1' => 'oeu', 'Os01g0210400' => 'osa', 'Os01g0304300' => 'osa', 'Os01g0749100' => 'osa', 'Os02g0745800' => 'osa', 'Os03g0769050' => 'osa', 'Os05g0531500' => 'osa', 'Os06g0724300' => 'osa', 'Os11g0198100' => 'osa', 'Peaxi162Scf00069g01425' => 'pax', 'Peaxi162Scf00280g00811' => 'pax', 'Peaxi162Scf00310g00615' => 'pax', 'Peaxi162Scf00362g00542' => 'pax', 'Peaxi162Scf00461g00310' => 'pax', 'Peaxi162Scf00530g00118' => 'pax', 'Peaxi162Scf00541g00057' => 'pax', 'Peaxi162Scf00661g00017' => 'pax', 'Peaxi162Scf00926g00027' => 'pax', 'Peaxi162Scf01064g00263' => 'pax', 'Peaxi162Scf01211g00135' => 'pax', 'PGR004G2336' => 'pgr', 'PGR042G0327' => 'pgr', 'PGR042G1957' => 'pgr', 'PGR042G2003' => 'pgr', 'PGR042G3929' => 'pgr', 'PGR083G1137' => 'pgr', 'PGR083G1364' => 'pgr', 'PGSC0003DMG400003381' => 'stu', 'PGSC0003DMG400003417' => 'stu', 'PGSC0003DMG400008981' => 'stu', 'PGSC0003DMG400012417' => 'stu', 'PGSC0003DMG400012823' => 'stu', 'PGSC0003DMG400016885' => 'stu', 'PGSC0003DMG400022812' => 'stu', 'PGSC0003DMG400029726' => 'stu', 'PGSC0003DMG401009243' => 'stu', 'PGSC0003DMG401031505' => 'stu', 'PGSC0003DMG402031505' => 'stu', 'Phvul.001G017600' => 'pvu', 'Phvul.002G193500' => 'pvu', 'Phvul.002G228900' => 'pvu', 'Phvul.002G236800' => 'pvu', 'Phvul.003G049500' => 'pvu', 'Phvul.005G072000' => 'pvu', 'Phvul.006G164800' => 'pvu', 'Phvul.006G185100' => 'pvu', 'Phvul.007G090000' => 'pvu', 'Potri.001G399800' => 'ptr', 'Potri.002G149900' => 'ptr', 'Potri.004G044100' => 'ptr', 'Potri.004G177600' => 'ptr', 'Potri.009G138000' => 'ptr', 'Potri.010G094000' => 'ptr', 'Potri.011G053000' => 'ptr', 'Potri.011G119300' => 'ptr', 'Potri.013G113700' => 'ptr', 'Potri.018G107800' => 'ptr', 'Potri.019G084100' => 'ptr', 'Pp3c14_23720' => 'ppa', 'Pp3c16_6340' => 'ppa', 'Pp3c23_13420' => 'ppa', 'Pp3c24_2740' => 'ppa', 'Pp3c25_860' => 'ppa', 'Pp3c8_21750' => 'ppa', 'Prupe.1G273000' => 'ppe', 'Prupe.1G273700' => 'ppe', 'Prupe.1G274100' => 'ppe', 'Prupe.2G023300' => 'ppe', 'Prupe.4G048000' => 'ppe', 'Prupe.4G080400' => 'ppe', 'Prupe.4G181200' => 'ppe', 'Prupe.8G056900' => 'ppe', 'Prupe.8G168700' => 'ppe', 'Psat1g189080' => 'psa', 'Psat1g204760' => 'psa', 'Psat4g175560' => 'psa', 'Psat4g177720' => 'psa', 'Psat5g244240' => 'psa', 'Psat6g010720' => 'psa', 'Psat6g187200' => 'psa', 'Psat7g072040' => 'psa', 'PSO017G3501' => 'pso', 'PSO063G2148' => 'pso', 'PSO063G5608' => 'pso', 'PSO210G6392' => 'pso', 'PSO541G2319' => 'pso', 'PSO541G2836' => 'pso', 'PSO541G4012' => 'pso', 'PSO541G6253' => 'pso', 'PSO675G0580' => 'pso', 'PSO675G0856' => 'pso', 'PSO675G5635' => 'pso', 'PSO675G9157' => 'pso', 'PSO832G1660' => 'pso', 'PSO832G1969' => 'pso', 'QL02p007186' => 'qlo', 'QL02p033904' => 'qlo', 'QL03p064391' => 'qlo', 'QL05p040593' => 'qlo', 'QL05p058242' => 'qlo', 'QL08p021825' => 'qlo', 'QL11p004981' => 'qlo', 'RcHm_v2.0_Chr1g0318301' => 'rch', 'RcHm_v2.0_Chr4g0418501' => 'rch', 'RcHm_v2.0_Chr4g0439971' => 'rch', 'RcHm_v2.0_Chr5g0008541' => 'rch', 'RcHm_v2.0_Chr5g0014101' => 'rch', 'RcHm_v2.0_Chr5g0014131' => 'rch', 'RcHm_v2.0_Chr5g0033621' => 'rch', 'RcHm_v2.0_Chr6g0272041' => 'rch', 'RcHm_v2.0_Chr6g0278831' => 'rch', 'Rhsim02G0130400' => 'rsi', 'Rhsim02G0171100' => 'rsi', 'Rhsim05G0053000' => 'rsi', 'Rhsim05G0053100' => 'rsi', 'Rhsim06G0096500' => 'rsi', 'Rhsim06G0096600' => 'rsi', 'Rhsim06G0199100' => 'rsi', 'Rhsim12G0062300' => 'rsi', 'Rhsim12G0062800' => 'rsi', 'Sabra02G0118600' => 'sbr', 'Sabra04G0027300' => 'sbr', 'Sabra04G0119500' => 'sbr', 'Sabra08G0112500' => 'sbr', 'Sabra11G0036800' => 'sbr', 'Sabra11G0103800' => 'sbr', 'Sabra13G0096300' => 'sbr', 'Sabra16G0262300' => 'sbr', 'Sabra18G0091700' => 'sbr', 'Sabra19G0095400' => 'sbr', 'SalBow6G3080' => 'sbo', 'SalBow7G1157' => 'sbo', 'SalBow7G2123' => 'sbo', 'SalBow7G2285' => 'sbo', 'SalBow7G3537' => 'sbo', 'SalBow8G2947' => 'sbo', 'SalBow8G4463' => 'sbo', 'SalBow8G5466' => 'sbo', 'Sc01g0001750' => 'sci', 'Sc02g0006640' => 'sci', 'Sc02g0006670' => 'sci', 'Sc04g0008220' => 'sci', 'Sc05g0006190' => 'sci', 'Sc08g0002760' => 'sci', 'Sc17g0006170' => 'sci', 'Sc22g0002050' => 'sci', 'Sc23g0001190' => 'sci', 'Sc24g0000980' => 'sci', 'Sed0006245' => 'sed', 'Sed0007543' => 'sed', 'Sed0009411' => 'sed', 'Sed0010765' => 'sed', 'Sed0012944' => 'sed', 'Sed0014682' => 'sed', 'Sed0016174' => 'sed', 'Sed0016796' => 'sed', 'Sed0020317' => 'sed', 'Sed0021467' => 'sed', 'SEGI_01316' => 'sgi', 'SEGI_03374' => 'sgi', 'SEGI_16265' => 'sgi', 'SEGI_18569' => 'sgi', 'SEGI_20351' => 'sgi', 'SEGI_26395' => 'sgi', 'SEGI_29469' => 'sgi', 'SEGI_34771' => 'sgi', 'SEGI_36769' => 'sgi', 'SEGI_37139' => 'sgi', 'SGA_v2.0_scaffold100G29687' => 'sas', 'SGA_v2.0_scaffold118G32472' => 'sas', 'SGA_v2.0_scaffold14G07051' => 'sas', 'SGA_v2.0_scaffold183G39845' => 'sas', 'SGA_v2.0_scaffold1G00174' => 'sas', 'SGA_v2.0_scaffold22G09714' => 'sas', 'SGA_v2.0_scaffold333G48992' => 'sas', 'SGA_v2.0_scaffold46G17491' => 'sas', 'SGA_v2.0_scaffold49G18294' => 'sas', 'SGA_v2.0_scaffold63G21658' => 'sas', 'SHI01741' => 'shi', 'SHI05771' => 'shi', 'SHI18077' => 'shi', 'SHI20525' => 'shi', 'SHI20527' => 'shi', 'SHI20528' => 'shi', 'SMO172G0185' => 'smo', 'SMO198G0020' => 'smo', 'SMO351G0006' => 'smo', 'SMO356G0118' => 'smo', 'SMO358G0296' => 'smo', 'SMO367G0079' => 'smo', 'SMO367G1277' => 'smo', 'Solyc01g014220.3' => 'sly', 'Solyc01g111770.2' => 'sly', 'Solyc02g078180.3' => 'sly', 'Solyc03g006430.3' => 'sly', 'Solyc03g006456.1' => 'sly', 'Solyc03g079860.2' => 'sly', 'Solyc04g079770.3' => 'sly', 'Solyc05g007430.4' => 'sly', 'Solyc07g063150.3' => 'sly', 'Solyc08g016620.3' => 'sly', 'Solyc09g057590.3' => 'sly', 'Solyc09g057600.1' => 'sly', 'Solyc10g009050.3' => 'sly', 'Solyc11g017420.2' => 'sly', 'Sopen01g053810' => 'spe', 'Sopen02g023040' => 'spe', 'Sopen03g002440' => 'spe', 'Sopen04g033350' => 'spe', 'Sopen05g003310' => 'spe', 'Sopen07g004050' => 'spe', 'Sopen07g031340' => 'spe', 'Sopen08g006990' => 'spe', 'Sopen10g004830' => 'spe', 'Sopen11g009370' => 'spe', 'Sp1g24450' => 'spa', 'Sp1g29670' => 'spa', 'Sp1g39600' => 'spa', 'Sp2g11080' => 'spa', 'Sp2g13970' => 'spa', 'Sp4g16130' => 'spa', 'Sp6g13080' => 'spa', 'Sp7g37270' => 'spa', 'TAR371G0065' => 'tar', 'TAR376G0340' => 'tar', 'TAR376G0435' => 'tar', 'TAR381G0002' => 'tar', 'TAR381G1236' => 'tar', 'TAR624G0055' => 'tar', 'TAR624G0324' => 'tar', 'TAR624G0696' => 'tar', 'TAR624G0906' => 'tar', 'TAR625G0107' => 'tar', 'TAR626G0015' => 'tar', 'TAR626G1356' => 'tar', 'TAR627G0888' => 'tar', 'TAR628G0399' => 'tar', 'TAR628G1327' => 'tar', 'TAR629G2831' => 'tar', 'TAR629G2874' => 'tar', 'TAR633G1432' => 'tar', 'TAR633G2771' => 'tar', 'THA.LOC104803394' => 'tha', 'THA.LOC104805153' => 'tha', 'THA.LOC104806784' => 'tha', 'THA.LOC104810473' => 'tha', 'THA.LOC104813100' => 'tha', 'THA.LOC104814215' => 'tha', 'THA.LOC104815554' => 'tha', 'THA.LOC104820544' => 'tha', 'THA.LOC104824754' => 'tha', 'THA.LOC104827717' => 'tha', 'Thecc.02G031400' => 'tca', 'Thecc.02G055900' => 'tca', 'Thecc.02G350800' => 'tca', 'Thecc.06G150900' => 'tca', 'Thecc.06G186600' => 'tca', 'Thecc.07G089600' => 'tca', 'Thecc.08G020400' => 'tca', 'Thecc.08G182100' => 'tca', 'Thhalv10000873m.g' => 'esa', 'Thhalv10004185m.g' => 'esa', 'Thhalv10006981m.g' => 'esa', 'Thhalv10007204m.g' => 'esa', 'Thhalv10011374m.g' => 'esa', 'Thhalv10013482m.g' => 'esa', 'Thhalv10017801m.g' => 'esa', 'Thhalv10024983m.g' => 'esa', 'TPR.G12072' => 'tpr', 'TPR.G15769' => 'tpr', 'TPR.G16504' => 'tpr', 'TPR.G16506' => 'tpr', 'TPR.G24345' => 'tpr', 'TPR.G26666' => 'tpr', 'TPR.G27320' => 'tpr', 'TPR.G31819' => 'tpr', 'TPR.G38879' => 'tpr', 'TPR.G39015' => 'tpr', 'TPR.G8819' => 'tpr', 'TWI09G0924' => 'twi', 'TWI12G0811' => 'twi', 'TWI12G1294' => 'twi', 'TWI31G0150' => 'twi', 'TWI36G1262' => 'twi', 'TWI38G1287' => 'twi', 'TWI38G1633' => 'twi', 'TWI38G1982' => 'twi', 'TWI39G0116' => 'twi', 'TWI60G1011' => 'twi', 'TWI63G0171' => 'twi', 'TWI73G0839' => 'twi', 'TWI79G1511' => 'twi', 'unitig_0.g915' => 'ugi', 'unitig_0.g916' => 'ugi', 'unitig_21.g20219' => 'ugi', 'unitig_21.g20416' => 'ugi', 'unitig_578.g16132' => 'ugi', 'unitig_578.g16718' => 'ugi', 'unitig_62.g23481' => 'ugi', 'unitig_744.g24535' => 'ugi', 'unitig_749.g13525' => 'ugi', 'vmacro01248' => 'vma', 'vmacro02290' => 'vma', 'vmacro10946' => 'vma', 'vmacro11865' => 'vma', 'vmacro12493' => 'vma', 'vmacro17322' => 'vma', 'vmacro21599' => 'vma', 'vmacro23041' => 'vma', 'VMungo0251G0004' => 'vmu', 'VMungo0251G2639' => 'vmu', 'VMungo0251G2967' => 'vmu', 'VMungo0540G0864' => 'vmu', 'VMungo0540G1569' => 'vmu', 'VMungo0647G0317' => 'vmu', 'VMungo0720G1373' => 'vmu', 'VMungo0720G1508' => 'vmu', 'VMungo1080G0485' => 'vmu', 'VMungo1215G3177' => 'vmu', 'Zm00001eb112600' => 'zma', 'Zm00001eb120220' => 'zma', 'Zm00001eb153240' => 'zma', 'Zm00001eb168880' => 'zma', 'Zm00001eb213920' => 'zma', 'Zm00001eb228280' => 'zma', 'Zm00001eb254580' => 'zma', 'Zm00001eb272180' => 'zma', 'Zm00001eb293190' => 'zma', 'Zm00001eb322930' => 'zma', 'Zm00001eb353360' => 'zma', 'Zm00001eb353390' => 'zma', 'Zm00001eb353430' => 'zma', 'Zm00001eb353440' => 'zma', 'Zm00001eb353780' => 'zma' ), 'gf_id' => 'HOM05D000499', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000499' ), 'data_identifier' => 'HOM05D000499', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000499', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1066', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p29780' => 'bna', 'A02p33180' => 'bna', 'A03p16470' => 'bna', 'A03p66010' => 'bna', 'A04p25970' => 'bna', 'A06p01270' => 'bna', 'A06p46080' => 'bna', 'A07p11400' => 'bna', 'A08p01840' => 'bna', 'A08p08230' => 'bna', 'A08p25740' => 'bna', 'A09p32070' => 'bna', 'A09p37830' => 'bna', 'A09p42840' => 'bna', 'A09p42850' => 'bna', 'Aa31LG10G2060' => 'aar', 'Aa31LG2G7410' => 'aar', 'Aa31LG6G10200' => 'aar', 'Aa31LG6G16680' => 'aar', 'Aa31LG6G8470' => 'aar', 'Aa31LG9G12730' => 'aar', 'Aa31LG9G13680' => 'aar', 'Aa31LG9G14920' => 'aar', 'Aa31LG9G6650' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4977' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5467' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3254' => 'aag', 'Actinidia02578' => 'ach', 'Actinidia07693' => 'ach', 'Actinidia08413' => 'ach', 'Actinidia08414' => 'ach', 'Actinidia15289' => 'ach', 'Actinidia19871' => 'ach', 'Actinidia21475' => 'ach', 'Actinidia22576' => 'ach', 'Actinidia28327' => 'ach', 'Actinidia32491' => 'ach', 'Actinidia39463' => 'ach', 'Actinidia39571' => 'ach', 'Ah.01g013750' => 'amhyb', 'Ah.01g023210' => 'amhyb', 'Ah.04g164850' => 'amhyb', 'Ah.05g178060' => 'amhyb', 'Ah.07g204270' => 'amhyb', 'Ah.07g208480' => 'amhyb', 'Ah.09g237410' => 'amhyb', 'Ah.14g089460' => 'amhyb', 'AL1G41790' => 'aly', 'AL1G49050' => 'aly', 'AL1G53810' => 'aly', 'AL1G61400' => 'aly', 'AL4G18580' => 'aly', 'AL5G12510' => 'aly', 'AL5G12540' => 'aly', 'AL6G43230' => 'aly', 'AL7G10370' => 'aly', 'AL7G19250' => 'aly', 'AL8G12240' => 'aly', 'AL8G18540' => 'aly', 'Aqoxy1G02409' => 'aox', 'Aqoxy2G03993' => 'aox', 'Aqoxy3G03357' => 'aox', 'Aqoxy4G00785' => 'aox', 'Aqoxy5G02598' => 'aox', 'Aqoxy6G00132' => 'aox', 'Aqoxy7G01776' => 'aox', 'Aqoxy7G02316' => 'aox', 'Aqoxy7G03973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.12AFKW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B8730' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27IQR1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3F75VG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3RE0GA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41TCQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.527VTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FIR39' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5W8UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DA38EV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ63HS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H1I32C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HC27T5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4M8AP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7N3CZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9UVDZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LS1NQA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT1D4B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SKC4TM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCFV76' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF9Q1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQWD9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1ZM88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WE07RT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YCK7VH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJE6Q6' => 'arhy', 'AT1G28240' => 'ath', 'AT1G34550' => 'ath', 'AT1G53040' => 'ath', 'AT2G02910' => 'ath', 'AT4G09630' => 'ath', 'AT4G38500' => 'ath', 'AT5G42660' => 'ath', 'AT5G46220' => 'ath', 'ATR0152G026' => 'atr', 'ATR0564G343' => 'atr', 'ATR0706G151' => 'atr', 'ATR0733G207' => 'atr', 'ATR0751G234' => 'atr', 'ATR0807G048' => 'atr', 'ATR1091G084' => 'atr', 'Atru.chr10.1229' => 'acertr', 'Atru.chr10.1230' => 'acertr', 'Atru.chr10.1874' => 'acertr', 'Atru.chr11.1808' => 'acertr', 'Atru.chr13.1795' => 'acertr', 'Atru.chr13.570' => 'acertr', 'Atru.chr2.2608' => 'acertr', 'Atru.chr2.2609' => 'acertr', 'Atru.chr5.3428' => 'acertr', 'Atru.chr8.1171' => 'acertr', 'AUR62004651' => 'cqu', 'AUR62008675' => 'cqu', 'AUR62010014' => 'cqu', 'AUR62013004' => 'cqu', 'AUR62014825' => 'cqu', 'AUR62015015' => 'cqu', 'AUR62015151' => 'cqu', 'AUR62017020' => 'cqu', 'AUR62019422' => 'cqu', 'AUR62023570' => 'cqu', 'AUR62025571' => 'cqu', 'AUR62029098' => 'cqu', 'AUR62033863' => 'cqu', 'AUR62034296' => 'cqu', 'AUR62040075' => 'cqu', 'BcaB02g07334' => 'bca', 'BcaB02g10575' => 'bca', 'BcaB03g12119' => 'bca', 'BcaB03g12120' => 'bca', 'BcaB03g13945' => 'bca', 'BcaB04g17123' => 'bca', 'BcaB04g17867' => 'bca', 'BcaB04g19839' => 'bca', 'BcaB07g30317' => 'bca', 'BcaB07g32432' => 'bca', 'BcaB07g33362' => 'bca', 'BcaB08g36611' => 'bca', 'BcaC01g00028' => 'bca', 'BcaC01g01356' => 'bca', 'BcaC01g02034' => 'bca', 'BcaC01g06051' => 'bca', 'BcaC03g16839' => 'bca', 'BcaC03g17176' => 'bca', 'BcaC05g26829' => 'bca', 'BcaC06g31490' => 'bca', 'BcaC06g35344' => 'bca', 'BcaC06g36570' => 'bca', 'BcaC07g37537' => 'bca', 'BcaC08g43491' => 'bca', 'BcaC08g43773' => 'bca', 'BcaNung00234' => 'bca', 'BcaNung01982' => 'bca', 'BcaNung03707' => 'bca', 'BcaNung06454' => 'bca', 'BolC2t10762H' => 'bol', 'BolC2t11191H' => 'bol', 'BolC3t14322H' => 'bol', 'BolC3t19747H' => 'bol', 'BolC3t21425H' => 'bol', 'BolC4t27800H' => 'bol', 'BolC5t31423H' => 'bol', 'BolC6t35951H' => 'bol', 'BolC6t36282H' => 'bol', 'BolC7t40678H' => 'bol', 'BolC7t40679H' => 'bol', 'BolC7t42222H' => 'bol', 'BolC7t43492H' => 'bol', 'BolC7t46785H' => 'bol', 'BolC8t47853H' => 'bol', 'BolC9t56805H' => 'bol', 'BraA02t08000Z' => 'bra', 'BraA02t08341Z' => 'bra', 'BraA03t10936Z' => 'bra', 'BraA03t15657Z' => 'bra', 'BraA04t18100Z' => 'bra', 'BraA05t20523Z' => 'bra', 'BraA06t23353Z' => 'bra', 'BraA06t27473Z' => 'bra', 'BraA06t27769Z' => 'bra', 'BraA07t28928Z' => 'bra', 'BraA08t32236Z' => 'bra', 'BraA08t32841Z' => 'bra', 'BraA08t34524Z' => 'bra', 'BraA09t38742Z' => 'bra', 'BraA09t39295Z' => 'bra', 'C02p47180' => 'bna', 'C02p50990' => 'bna', 'C03p19360' => 'bna', 'C03p74950' => 'bna', 'C03p91000' => 'bna', 'C04p63260' => 'bna', 'C05p27050' => 'bna', 'C06p08750' => 'bna', 'C06p11490' => 'bna', 'C07p02820' => 'bna', 'C07p17180' => 'bna', 'C07p29440' => 'bna', 'C07p63730' => 'bna', 'C09p39260' => 'bna', 'CAN.G1164.34' => 'can', 'CAN.G1164.39' => 'can', 'CAN.G1530.3' => 'can', 'CAN.G162.61' => 'can', 'CAN.G176.6' => 'can', 'CAN.G289.49' => 'can', 'CAN.G370.21' => 'can', 'CAN.G370.22' => 'can', 'CAN.G371.117' => 'can', 'CAN.G58.37' => 'can', 'CAN.G588.98' => 'can', 'CANSAT21G2266' => 'cansat', 'CANSAT25G2799' => 'cansat', 'CANSAT35G0862' => 'cansat', 'CANSAT35G1704' => 'cansat', 'CANSAT35G1760' => 'cansat', 'CANSAT56G3971' => 'cansat', 'CANSAT56G4116' => 'cansat', 'CANSAT80G1259' => 'cansat', 'CARHR027730' => 'chi', 'CARHR033880' => 'chi', 'CARHR043270' => 'chi', 'CARHR145330' => 'chi', 'CARHR145340' => 'chi', 'CARHR175570' => 'chi', 'CARHR181570' => 'chi', 'CARHR258470' => 'chi', 'CARHR260490' => 'chi', 'CARHR294220' => 'chi', 'Carub.0001s2668' => 'cru', 'Carub.0001s3257' => 'cru', 'Carub.0001s4220' => 'cru', 'Carub.0005s0179' => 'cru', 'Carub.0006s2807' => 'cru', 'Carub.0007s0039' => 'cru', 'Carub.0008s0169' => 'cru', 'Carub.0008s0636' => 'cru', 'Ca_00338_v3' => 'car', 'Ca_00542_v3' => 'car', 'Ca_01844_v3' => 'car', 'Ca_10611_v3' => 'car', 'Ca_13326_v3' => 'car', 'Ca_17944_v3' => 'car', 'Ca_18546_v3' => 'car', 'Ca_24219_v3' => 'car', 'Ca_29972_v3' => 'car', 'CBR_g3681' => 'cbr', 'CBR_g40021' => 'cbr', 'Cc01_g08140' => 'ccan', 'Cc02_g13410' => 'ccan', 'Cc02_g37480' => 'ccan', 'Cc05_g12030' => 'ccan', 'Cc09_g03370' => 'ccan', 'Cc09_g10300' => 'ccan', 'Cc10_g03530' => 'ccan', 'Cc10_g11380' => 'ccan', 'CDE01G0176' => 'cde', 'CDE02G0675' => 'cde', 'CDE02G0942' => 'cde', 'CDE02G1153' => 'cde', 'CDE02G4177' => 'cde', 'CDE04G2117' => 'cde', 'CDE04G2736' => 'cde', 'CDE08G1161' => 'cde', 'CDE09G1238' => 'cde', 'Cfa000467' => 'cfa', 'Cfa000947' => 'cfa', 'Cfa004969' => 'cfa', 'Cfa005284' => 'cfa', 'Cfa008993' => 'cfa', 'Cfa018187' => 'cfa', 'Cfa018454' => 'cfa', 'Cfa020585' => 'cfa', 'Ciclev10000424m.g' => 'ccl', 'Ciclev10003605m.g' => 'ccl', 'Ciclev10007828m.g' => 'ccl', 'Ciclev10014620m.g' => 'ccl', 'Ciclev10015169m.g' => 'ccl', 'Ciclev10018291m.g' => 'ccl', 'Ciclev10028256m.g' => 'ccl', 'Ciclev10033822m.g' => 'ccl', 'CiPaw.05G060300' => 'cil', 'CiPaw.05G085000' => 'cil', 'CiPaw.06G083700' => 'cil', 'CiPaw.06G120300' => 'cil', 'CiPaw.09G060500' => 'cil', 'CiPaw.09G123800' => 'cil', 'CiPaw.11G169700' => 'cil', 'CiPaw.12G118300' => 'cil', 'CiPaw.15G071000' => 'cil', 'CiPaw.15G081900' => 'cil', 'ClCG01G024610' => 'cla', 'ClCG03G006070' => 'cla', 'ClCG05G019250' => 'cla', 'ClCG09G009500' => 'cla', 'ClCG11G008200' => 'cla', 'ClCG11G018080' => 'cla', 'COL.COLO4_17373' => 'col', 'COL.COLO4_22994' => 'col', 'COL.COLO4_26389' => 'col', 'COL.COLO4_27170' => 'col', 'COL.COLO4_31074' => 'col', 'COL.COLO4_31465' => 'col', 'COL.COLO4_36438' => 'col', 'COL.COLO4_36439' => 'col', 'Cpa.g.c38781' => 'cpa', 'Cpa.g.sc128.12' => 'cpa', 'Cpa.g.sc166.7' => 'cpa', 'Cpa.g.sc166.8' => 'cpa', 'Cpa.g.sc20.111' => 'cpa', 'Cpa.g.sc27.31' => 'cpa', 'Cpa.g.sc64.36' => 'cpa', 'Cpa.g.sc64.37' => 'cpa', 'Cpa.g.sc66.49' => 'cpa', 'Cpa.g.sc80.64' => 'cpa', 'CsaV3_1G012320' => 'csa', 'CsaV3_2G008480' => 'csa', 'CsaV3_2G033450' => 'csa', 'CsaV3_3G044830' => 'csa', 'CsaV3_4G033710' => 'csa', 'CsaV3_6G051730' => 'csa', 'CsaV3_7G025350' => 'csa', 'CSS0001067' => 'camsi', 'CSS0005996' => 'camsi', 'CSS0006590' => 'camsi', 'CSS0009673' => 'camsi', 'CSS0010201' => 'camsi', 'CSS0010549' => 'camsi', 'CSS0011364' => 'camsi', 'CSS0014473' => 'camsi', 'CSS0014961' => 'camsi', 'CSS0020191' => 'camsi', 'CSS0021165' => 'camsi', 'CSS0022306' => 'camsi', 'CSS0030591' => 'camsi', 'CSS0030696' => 'camsi', 'CSS0032653' => 'camsi', 'CSS0037487' => 'camsi', 'CSS0041102' => 'camsi', 'CSS0041261' => 'camsi', 'CSS0046246' => 'camsi', 'CSS0049256' => 'camsi', 'DCAR_004075' => 'dca', 'DCAR_011538' => 'dca', 'DCAR_019553' => 'dca', 'DCAR_020952' => 'dca', 'DCAR_021739' => 'dca', 'DCAR_027407' => 'dca', 'DCAR_027913' => 'dca', 'DCAR_028066' => 'dca', 'Dinv05899' => 'din', 'Dinv07563' => 'din', 'Dinv08010' => 'din', 'Dinv14125' => 'din', 'Dinv20172' => 'din', 'Dinv30743' => 'din', 'Dinv31229' => 'din', 'Dinv34162' => 'din', 'Dinv36028' => 'din', 'Dinv39368' => 'din', 'Dinv40565' => 'din', 'Dinv41706' => 'din', 'Duzib052G0089' => 'dzi', 'Duzib116G0641' => 'dzi', 'Duzib132G0069' => 'dzi', 'Duzib132G1219' => 'dzi', 'Duzib147G0278' => 'dzi', 'Duzib160G0480' => 'dzi', 'Duzib170G0661' => 'dzi', 'Duzib177G0591' => 'dzi', 'Duzib187G1353' => 'dzi', 'Duzib192G0858' => 'dzi', 'Duzib192G0883' => 'dzi', 'Duzib213G0506' => 'dzi', 'Duzib235G0289' => 'dzi', 'Duzib251G0422' => 'dzi', 'ECA232G3898' => 'eca', 'ECA233G5950' => 'eca', 'ECA234G1699' => 'eca', 'ECA234G2421' => 'eca', 'ECA236G0426' => 'eca', 'ECA236G4331' => 'eca', 'ECA248G2573' => 'eca', 'EL10Ac1g00077' => 'bvu', 'EL10Ac1g01746' => 'bvu', 'EL10Ac2g03464' => 'bvu', 'EL10Ac4g08176' => 'bvu', 'EL10Ac7g17521' => 'bvu', 'EL10Ac8g20386' => 'bvu', 'EL10Ac9g21343' => 'bvu', 'EL10Ac9g22688' => 'bvu', 'Eucgr.B03434' => 'egr', 'Eucgr.D00618' => 'egr', 'Eucgr.E02395' => 'egr', 'Eucgr.F01129' => 'egr', 'Eucgr.F02622' => 'egr', 'Eucgr.F04207' => 'egr', 'FAN01G0570' => 'fan', 'FAN03G3351' => 'fan', 'FAN06G3702' => 'fan', 'FAN07G2149' => 'fan', 'FAN10G3758' => 'fan', 'FAN11G1170' => 'fan', 'FAN11G2050' => 'fan', 'FAN11G2724' => 'fan', 'FAN12G1700' => 'fan', 'FAN12G2028' => 'fan', 'FAN15G1160' => 'fan', 'FAN15G3063' => 'fan', 'FAN16G2540' => 'fan', 'FAN16G3077' => 'fan', 'FAN16G3624' => 'fan', 'FAN17G0221' => 'fan', 'FAN20G2492' => 'fan', 'FAN20G2905' => 'fan', 'FAN21G0548' => 'fan', 'FAN21G1300' => 'fan', 'FAN22G0077' => 'fan', 'FAN22G1315' => 'fan', 'FAN24G1280' => 'fan', 'FAN24G1445' => 'fan', 'FAN24G3527' => 'fan', 'FAN25G0464' => 'fan', 'FAN25G2885' => 'fan', 'FAN25G3270' => 'fan', 'FAN27G1101' => 'fan', 'FAN27G2846' => 'fan', 'FAN27G3524' => 'fan', 'FvH4_2g11770' => 'fve', 'FvH4_2g15630' => 'fve', 'FvH4_3g05570' => 'fve', 'FvH4_3g09110' => 'fve', 'FvH4_3g19940' => 'fve', 'FvH4_4g04821' => 'fve', 'FvH4_4g31480' => 'fve', 'FvH4_7g01740' => 'fve', 'Glyma.05G130400' => 'gma', 'Glyma.05G156400' => 'gma', 'Glyma.07G197000' => 'gma', 'Glyma.08G085151' => 'gma', 'Glyma.08G114500' => 'gma', 'Glyma.08G300400' => 'gma', 'Glyma.10G215800' => 'gma', 'Glyma.12G224400' => 'gma', 'Glyma.13G179300' => 'gma', 'Glyma.13G218151' => 'gma', 'Glyma.13G238800' => 'gma', 'Glyma.13G276900' => 'gma', 'Glyma.14G078200' => 'gma', 'Glyma.15G074500' => 'gma', 'Glyma.15G094100' => 'gma', 'Glyma.17G247200' => 'gma', 'Glyma.18G120100' => 'gma', 'Glyma.20G176000' => 'gma', 'Gohir.A01G063600' => 'ghi', 'Gohir.A01G170301' => 'ghi', 'Gohir.A02G060500' => 'ghi', 'Gohir.A05G133850' => 'ghi', 'Gohir.A05G161400' => 'ghi', 'Gohir.A06G012900' => 'ghi', 'Gohir.A06G035901' => 'ghi', 'Gohir.A06G127100' => 'ghi', 'Gohir.A06G210500' => 'ghi', 'Gohir.A08G008650' => 'ghi', 'Gohir.A09G072700' => 'ghi', 'Gohir.A09G088301' => 'ghi', 'Gohir.A10G040600' => 'ghi', 'Gohir.A12G036300' => 'ghi', 'Gohir.A12G143350' => 'ghi', 'Gohir.A12G165500' => 'ghi', 'Gohir.A13G145700' => 'ghi', 'Gohir.D01G050000' => 'ghi', 'Gohir.D01G051366' => 'ghi', 'Gohir.D01G161350' => 'ghi', 'Gohir.D02G065900' => 'ghi', 'Gohir.D05G164200' => 'ghi', 'Gohir.D05G355500' => 'ghi', 'Gohir.D06G010400' => 'ghi', 'Gohir.D06G111250' => 'ghi', 'Gohir.D06G132000' => 'ghi', 'Gohir.D06G210500' => 'ghi', 'Gohir.D07G165675' => 'ghi', 'Gohir.D08G062240' => 'ghi', 'Gohir.D08G086101' => 'ghi', 'Gohir.D08G138060' => 'ghi', 'Gohir.D09G072300' => 'ghi', 'Gohir.D10G041400' => 'ghi', 'Gohir.D11G191020' => 'ghi', 'Gohir.D11G212066' => 'ghi', 'Gohir.D12G036300' => 'ghi', 'Gohir.D12G168600' => 'ghi', 'Gohir.D13G150600' => 'ghi', 'Gorai.001G057300' => 'gra', 'Gorai.002G069900' => 'gra', 'Gorai.002G200000' => 'gra', 'Gorai.003G067600' => 'gra', 'Gorai.005G074800' => 'gra', 'Gorai.006G087300' => 'gra', 'Gorai.008G037500' => 'gra', 'Gorai.008G181400' => 'gra', 'Gorai.009G169400' => 'gra', 'Gorai.009G387900' => 'gra', 'Gorai.010G013300' => 'gra', 'Gorai.010G153800' => 'gra', 'Gorai.010G255800' => 'gra', 'Gorai.011G043700' => 'gra', 'Gorai.011G198900' => 'gra', 'Gorai.013G168400' => 'gra', 'GSVIVG01005212001' => 'vvi', 'GSVIVG01006163001' => 'vvi', 'GSVIVG01009625001' => 'vvi', 'GSVIVG01014338001' => 'vvi', 'GSVIVG01020005001' => 'vvi', 'GSVIVG01021450001' => 'vvi', 'GSVIVG01023975001' => 'vvi', 'GSVIVG01034490001' => 'vvi', 'HanXRQChr04g0112071' => 'han', 'HanXRQChr05g0131151' => 'han', 'HanXRQChr09g0262371' => 'han', 'HanXRQChr09g0268401' => 'han', 'HanXRQChr10g0279241' => 'han', 'HanXRQChr10g0297961' => 'han', 'HanXRQChr11g0326231' => 'han', 'HanXRQChr11g0328471' => 'han', 'HanXRQChr16g0507941' => 'han', 'HanXRQChr17g0560211' => 'han', 'Haze_02108' => 'cav', 'Haze_02428' => 'cav', 'Haze_05593' => 'cav', 'Haze_06448' => 'cav', 'Haze_09427' => 'cav', 'Haze_12022' => 'cav', 'Haze_17612' => 'cav', 'Haze_17928' => 'cav', 'Hma1.2p1_0032F.1_g019250' => 'hma', 'Hma1.2p1_0163F.1_g072690' => 'hma', 'Hma1.2p1_0265F.1_g106710' => 'hma', 'Hma1.2p1_0286F.1_g113970' => 'hma', 'Hma1.2p1_0363F.1_g136640' => 'hma', 'Hma1.2p1_0584F.1_g183470' => 'hma', 'Hma1.2p1_0885F.1_g232570' => 'hma', 'HPP92_006022' => 'vpl', 'HPP92_007320' => 'vpl', 'HPP92_011521' => 'vpl', 'HPP92_019387' => 'vpl', 'HPP92_024038' => 'vpl', 'Hund05891' => 'sun', 'Hund06450' => 'sun', 'Hund12053' => 'sun', 'Hund16800' => 'sun', 'Hund21222' => 'sun', 'Hund22896' => 'sun', 'Hund23746' => 'sun', 'Hund27083' => 'sun', 'Lalb_Chr02g0141831' => 'lal', 'Lalb_Chr02g0141841' => 'lal', 'Lalb_Chr05g0220411' => 'lal', 'Lalb_Chr06g0162081' => 'lal', 'Lalb_Chr09g0327651' => 'lal', 'Lalb_Chr13g0295051' => 'lal', 'Lalb_Chr15g0086801' => 'lal', 'Lalb_Chr16g0383781' => 'lal', 'Lalb_Chr16g0383791' => 'lal', 'Lalb_Chr18g0055441' => 'lal', 'Lalb_Chr18g0059611' => 'lal', 'Lalb_Chr20g0109661' => 'lal', 'Lalb_Chr20g0109831' => 'lal', 'Lalb_Chr20g0121871' => 'lal', 'Lalb_Chr22g0355361' => 'lal', 'Lalb_Chr25g0286371' => 'lal', 'Lj1A1187G43' => 'lonja', 'Lj1A1205T50' => 'lonja', 'Lj1A800G33' => 'lonja', 'Lj1C1187T7' => 'lonja', 'Lj1C843T11' => 'lonja', 'Lj1g0010940' => 'lja', 'Lj2A288T69' => 'lonja', 'Lj3g0024276' => 'lja', 'Lj4A47T76' => 'lonja', 'Lj4g0005805' => 'lja', 'Lj4g0006097' => 'lja', 'Lj4g0008528' => 'lja', 'Lj4g0024907' => 'lja', 'Lj5g0012472' => 'lja', 'Lj5g0018648' => 'lja', 'Lj6C789G1' => 'lonja', 'Lj6g0004000' => 'lja', 'Lj7A292G67' => 'lonja', 'Lj7A292T64' => 'lonja', 'Lj9A400T58' => 'lonja', 'Lsat_1_v5_gn_1_126181' => 'lsa', 'Lsat_1_v5_gn_4_123041' => 'lsa', 'Lsat_1_v5_gn_4_133620' => 'lsa', 'Lsat_1_v5_gn_4_53221' => 'lsa', 'Lsat_1_v5_gn_4_71961' => 'lsa', 'Lsat_1_v5_gn_7_105241' => 'lsa', 'Lsat_1_v5_gn_7_21361' => 'lsa', 'Lsat_1_v5_gn_7_28860' => 'lsa', 'Lsat_1_v5_gn_7_31260' => 'lsa', 'Lsat_1_v5_gn_8_52801' => 'lsa', 'Manes.02G191400' => 'mes', 'Manes.03G110100' => 'mes', 'Manes.04G071100' => 'mes', 'Manes.05G100500' => 'mes', 'Manes.05G164700' => 'mes', 'Manes.15G087000' => 'mes', 'Manes.15G121500' => 'mes', 'Manes.16G028300' => 'mes', 'Manes.17G046100' => 'mes', 'Manes.17G069800' => 'mes', 'Manes.18G100500' => 'mes', 'Mapoly0002s0109' => 'mpo', 'Mapoly0024s0007' => 'mpo', 'Mapoly0089s0032' => 'mpo', 'MBI04_g42241_MAGBIO' => 'mbi', 'MBI05_g11988_MAGBIO' => 'mbi', 'MBI05_g35452_MAGBIO' => 'mbi', 'MBI07_g30179_MAGBIO' => 'mbi', 'MBI07_g35859_MAGBIO' => 'mbi', 'MBI07_g35860_MAGBIO' => 'mbi', 'MBI07_g37166_MAGBIO' => 'mbi', 'MBI08_g18172_MAGBIO' => 'mbi', 'MBI09_g08441_MAGBIO' => 'mbi', 'MBI13_g01676_MAGBIO' => 'mbi', 'MBI14_g42955_MAGBIO' => 'mbi', 'MBI16_g13161_MAGBIO' => 'mbi', 'MBI17_g27204_MAGBIO' => 'mbi', 'MBI19_g21595_MAGBIO' => 'mbi', 'MD00G1148400' => 'mdo', 'MD02G1301200' => 'mdo', 'MD03G1227800' => 'mdo', 'MD05G1041100' => 'mdo', 'MD05G1124800' => 'mdo', 'MD05G1284000' => 'mdo', 'MD05G1338800' => 'mdo', 'MD05G1338900' => 'mdo', 'MD07G1022800' => 'mdo', 'MD10G1047500' => 'mdo', 'MD10G1127500' => 'mdo', 'MD10G1262300' => 'mdo', 'MD10G1293800' => 'mdo', 'MD16G1074300' => 'mdo', 'Medtr1g021670' => 'mtr', 'Medtr1g096320' => 'mtr', 'Medtr2g013690' => 'mtr', 'Medtr2g019450' => 'mtr', 'Medtr2g085170' => 'mtr', 'Medtr4g088785' => 'mtr', 'Medtr8g055930' => 'mtr', 'Medtr8g085850' => 'mtr', 'MELO3C002605.2' => 'cme', 'MELO3C003891.2' => 'cme', 'MELO3C004012.2' => 'cme', 'MELO3C007134.2' => 'cme', 'MELO3C008118.2' => 'cme', 'MELO3C016700.2' => 'cme', 'MELO3C024127.2' => 'cme', 'MELO3C033361.2' => 'cme', 'MELO3C033362.2' => 'cme', 'Migut.C00430' => 'egut', 'Migut.C01246' => 'egut', 'Migut.E00101' => 'egut', 'Migut.H01486' => 'egut', 'Migut.H01939' => 'egut', 'Migut.K00360' => 'egut', 'Migut.M00910' => 'egut', 'Migut.M01139' => 'egut', 'Migut.N02677' => 'egut', 'MSTRG.13252' => 'ama', 'MSTRG.14701' => 'ama', 'MSTRG.1521' => 'ama', 'MSTRG.15884' => 'ama', 'MSTRG.16242' => 'ama', 'MSTRG.22285' => 'ama', 'MSTRG.22444' => 'ama', 'MSTRG.2349' => 'ama', 'MSTRG.26308' => 'ama', 'MSTRG.28296' => 'ama', 'MSTRG.9895' => 'ama', 'Nitab4.5_0000110g0060' => 'nta', 'Nitab4.5_0000420g0130' => 'nta', 'Nitab4.5_0000422g0030' => 'nta', 'Nitab4.5_0000560g0180' => 'nta', 'Nitab4.5_0000703g0100' => 'nta', 'Nitab4.5_0000786g0200' => 'nta', 'Nitab4.5_0001336g0020' => 'nta', 'Nitab4.5_0001796g0030' => 'nta', 'Nitab4.5_0003348g0060' => 'nta', 'Nitab4.5_0003698g0040' => 'nta', 'Nitab4.5_0003942g0090' => 'nta', 'Nitab4.5_0004775g0070' => 'nta', 'Nitab4.5_0004864g0030' => 'nta', 'Nitab4.5_0005615g0020' => 'nta', 'Nitab4.5_0009288g0030' => 'nta', 'Nitab4.5_0009341g0010' => 'nta', 'Nitab4.5_0009535g0010' => 'nta', 'Nn1g03995' => 'nnu', 'Nn1g04100' => 'nnu', 'Nn1g06530' => 'nnu', 'Nn3g16404' => 'nnu', 'Nn3g17212' => 'nnu', 'Nn3g20776' => 'nnu', 'Nn3g21923' => 'nnu', 'Nn5g27737' => 'nnu', 'Nn5g29461' => 'nnu', 'Nn7g38355' => 'nnu', 'Nn8g39873' => 'nnu', 'Oeu000548.2' => 'oeu', 'Oeu004672.1' => 'oeu', 'Oeu015605.2' => 'oeu', 'Oeu016092.1' => 'oeu', 'Oeu017879.3' => 'oeu', 'Oeu024910.1' => 'oeu', 'Oeu028965.1' => 'oeu', 'Oeu031269.1' => 'oeu', 'Oeu031270.1' => 'oeu', 'Oeu032535.1' => 'oeu', 'Oeu034151.1' => 'oeu', 'Oeu034152.1' => 'oeu', 'Oeu034588.2' => 'oeu', 'Oeu050846.1' => 'oeu', 'Oeu050849.2' => 'oeu', 'Oeu051063.2' => 'oeu', 'Oeu052368.1' => 'oeu', 'Oeu052370.1' => 'oeu', 'Os01g0210400' => 'osa', 'Os01g0304300' => 'osa', 'Os01g0749100' => 'osa', 'Os02g0745800' => 'osa', 'Os03g0769050' => 'osa', 'Os05g0531500' => 'osa', 'Os06g0724300' => 'osa', 'Os11g0198100' => 'osa', 'Peaxi162Scf00069g01425' => 'pax', 'Peaxi162Scf00280g00811' => 'pax', 'Peaxi162Scf00310g00615' => 'pax', 'Peaxi162Scf00362g00542' => 'pax', 'Peaxi162Scf00461g00310' => 'pax', 'Peaxi162Scf00530g00118' => 'pax', 'Peaxi162Scf00541g00057' => 'pax', 'Peaxi162Scf00661g00017' => 'pax', 'Peaxi162Scf00926g00027' => 'pax', 'Peaxi162Scf01064g00263' => 'pax', 'Peaxi162Scf01211g00135' => 'pax', 'PGR004G2336' => 'pgr', 'PGR042G0327' => 'pgr', 'PGR042G1957' => 'pgr', 'PGR042G2003' => 'pgr', 'PGR042G3929' => 'pgr', 'PGR083G1137' => 'pgr', 'PGR083G1364' => 'pgr', 'PGSC0003DMG400003381' => 'stu', 'PGSC0003DMG400003417' => 'stu', 'PGSC0003DMG400008981' => 'stu', 'PGSC0003DMG400012417' => 'stu', 'PGSC0003DMG400012823' => 'stu', 'PGSC0003DMG400016885' => 'stu', 'PGSC0003DMG400022812' => 'stu', 'PGSC0003DMG400029726' => 'stu', 'PGSC0003DMG401009243' => 'stu', 'PGSC0003DMG401031505' => 'stu', 'PGSC0003DMG402031505' => 'stu', 'Phvul.001G017600' => 'pvu', 'Phvul.002G193500' => 'pvu', 'Phvul.002G228900' => 'pvu', 'Phvul.002G236800' => 'pvu', 'Phvul.003G049500' => 'pvu', 'Phvul.005G072000' => 'pvu', 'Phvul.006G164800' => 'pvu', 'Phvul.006G185100' => 'pvu', 'Phvul.007G090000' => 'pvu', 'Potri.001G399800' => 'ptr', 'Potri.002G149900' => 'ptr', 'Potri.004G044100' => 'ptr', 'Potri.004G177600' => 'ptr', 'Potri.009G138000' => 'ptr', 'Potri.010G094000' => 'ptr', 'Potri.011G053000' => 'ptr', 'Potri.011G119300' => 'ptr', 'Potri.013G113700' => 'ptr', 'Potri.018G107800' => 'ptr', 'Potri.019G084100' => 'ptr', 'Pp3c14_23720' => 'ppa', 'Pp3c16_6340' => 'ppa', 'Pp3c23_13420' => 'ppa', 'Pp3c24_2740' => 'ppa', 'Pp3c25_860' => 'ppa', 'Pp3c8_21750' => 'ppa', 'Prupe.1G273000' => 'ppe', 'Prupe.1G273700' => 'ppe', 'Prupe.1G274100' => 'ppe', 'Prupe.2G023300' => 'ppe', 'Prupe.4G048000' => 'ppe', 'Prupe.4G080400' => 'ppe', 'Prupe.4G181200' => 'ppe', 'Prupe.8G056900' => 'ppe', 'Prupe.8G168700' => 'ppe', 'Psat1g189080' => 'psa', 'Psat1g204760' => 'psa', 'Psat4g175560' => 'psa', 'Psat4g177720' => 'psa', 'Psat5g244240' => 'psa', 'Psat6g010720' => 'psa', 'Psat6g187200' => 'psa', 'Psat7g072040' => 'psa', 'PSO017G3501' => 'pso', 'PSO063G2148' => 'pso', 'PSO063G5608' => 'pso', 'PSO210G6392' => 'pso', 'PSO541G2319' => 'pso', 'PSO541G2836' => 'pso', 'PSO541G4012' => 'pso', 'PSO541G6253' => 'pso', 'PSO675G0580' => 'pso', 'PSO675G0856' => 'pso', 'PSO675G5635' => 'pso', 'PSO675G9157' => 'pso', 'PSO832G1660' => 'pso', 'PSO832G1969' => 'pso', 'QL02p007186' => 'qlo', 'QL02p033904' => 'qlo', 'QL03p064391' => 'qlo', 'QL05p040593' => 'qlo', 'QL05p058242' => 'qlo', 'QL08p021825' => 'qlo', 'QL11p004981' => 'qlo', 'RcHm_v2.0_Chr1g0318301' => 'rch', 'RcHm_v2.0_Chr4g0418501' => 'rch', 'RcHm_v2.0_Chr4g0439971' => 'rch', 'RcHm_v2.0_Chr5g0008541' => 'rch', 'RcHm_v2.0_Chr5g0014101' => 'rch', 'RcHm_v2.0_Chr5g0014131' => 'rch', 'RcHm_v2.0_Chr5g0033621' => 'rch', 'RcHm_v2.0_Chr6g0272041' => 'rch', 'RcHm_v2.0_Chr6g0278831' => 'rch', 'Rhsim02G0130400' => 'rsi', 'Rhsim02G0171100' => 'rsi', 'Rhsim05G0053000' => 'rsi', 'Rhsim05G0053100' => 'rsi', 'Rhsim06G0096500' => 'rsi', 'Rhsim06G0096600' => 'rsi', 'Rhsim06G0199100' => 'rsi', 'Rhsim12G0062300' => 'rsi', 'Rhsim12G0062800' => 'rsi', 'Sabra02G0118600' => 'sbr', 'Sabra04G0027300' => 'sbr', 'Sabra04G0119500' => 'sbr', 'Sabra08G0112500' => 'sbr', 'Sabra11G0036800' => 'sbr', 'Sabra11G0103800' => 'sbr', 'Sabra13G0096300' => 'sbr', 'Sabra16G0262300' => 'sbr', 'Sabra18G0091700' => 'sbr', 'Sabra19G0095400' => 'sbr', 'SalBow6G3080' => 'sbo', 'SalBow7G1157' => 'sbo', 'SalBow7G2123' => 'sbo', 'SalBow7G2285' => 'sbo', 'SalBow7G3537' => 'sbo', 'SalBow8G2947' => 'sbo', 'SalBow8G4463' => 'sbo', 'SalBow8G5466' => 'sbo', 'Sc01g0001750' => 'sci', 'Sc02g0006640' => 'sci', 'Sc02g0006670' => 'sci', 'Sc04g0008220' => 'sci', 'Sc05g0006190' => 'sci', 'Sc08g0002760' => 'sci', 'Sc17g0006170' => 'sci', 'Sc22g0002050' => 'sci', 'Sc23g0001190' => 'sci', 'Sc24g0000980' => 'sci', 'Sed0006245' => 'sed', 'Sed0007543' => 'sed', 'Sed0009411' => 'sed', 'Sed0010765' => 'sed', 'Sed0012944' => 'sed', 'Sed0014682' => 'sed', 'Sed0016174' => 'sed', 'Sed0016796' => 'sed', 'Sed0020317' => 'sed', 'Sed0021467' => 'sed', 'SEGI_01316' => 'sgi', 'SEGI_03374' => 'sgi', 'SEGI_16265' => 'sgi', 'SEGI_18569' => 'sgi', 'SEGI_20351' => 'sgi', 'SEGI_26395' => 'sgi', 'SEGI_29469' => 'sgi', 'SEGI_34771' => 'sgi', 'SEGI_36769' => 'sgi', 'SEGI_37139' => 'sgi', 'SGA_v2.0_scaffold100G29687' => 'sas', 'SGA_v2.0_scaffold118G32472' => 'sas', 'SGA_v2.0_scaffold14G07051' => 'sas', 'SGA_v2.0_scaffold183G39845' => 'sas', 'SGA_v2.0_scaffold1G00174' => 'sas', 'SGA_v2.0_scaffold22G09714' => 'sas', 'SGA_v2.0_scaffold333G48992' => 'sas', 'SGA_v2.0_scaffold46G17491' => 'sas', 'SGA_v2.0_scaffold49G18294' => 'sas', 'SGA_v2.0_scaffold63G21658' => 'sas', 'SHI01741' => 'shi', 'SHI05771' => 'shi', 'SHI18077' => 'shi', 'SHI20525' => 'shi', 'SHI20527' => 'shi', 'SHI20528' => 'shi', 'SMO172G0185' => 'smo', 'SMO198G0020' => 'smo', 'SMO351G0006' => 'smo', 'SMO356G0118' => 'smo', 'SMO358G0296' => 'smo', 'SMO367G0079' => 'smo', 'SMO367G1277' => 'smo', 'Solyc01g014220.3' => 'sly', 'Solyc01g111770.2' => 'sly', 'Solyc02g078180.3' => 'sly', 'Solyc03g006430.3' => 'sly', 'Solyc03g006456.1' => 'sly', 'Solyc03g079860.2' => 'sly', 'Solyc04g079770.3' => 'sly', 'Solyc05g007430.4' => 'sly', 'Solyc07g063150.3' => 'sly', 'Solyc08g016620.3' => 'sly', 'Solyc09g057590.3' => 'sly', 'Solyc09g057600.1' => 'sly', 'Solyc10g009050.3' => 'sly', 'Solyc11g017420.2' => 'sly', 'Sopen01g053810' => 'spe', 'Sopen02g023040' => 'spe', 'Sopen03g002440' => 'spe', 'Sopen04g033350' => 'spe', 'Sopen05g003310' => 'spe', 'Sopen07g004050' => 'spe', 'Sopen07g031340' => 'spe', 'Sopen08g006990' => 'spe', 'Sopen10g004830' => 'spe', 'Sopen11g009370' => 'spe', 'Sp1g24450' => 'spa', 'Sp1g29670' => 'spa', 'Sp1g39600' => 'spa', 'Sp2g11080' => 'spa', 'Sp2g13970' => 'spa', 'Sp4g16130' => 'spa', 'Sp6g13080' => 'spa', 'Sp7g37270' => 'spa', 'TAR371G0065' => 'tar', 'TAR376G0340' => 'tar', 'TAR376G0435' => 'tar', 'TAR381G0002' => 'tar', 'TAR381G1236' => 'tar', 'TAR624G0055' => 'tar', 'TAR624G0324' => 'tar', 'TAR624G0696' => 'tar', 'TAR624G0906' => 'tar', 'TAR625G0107' => 'tar', 'TAR626G0015' => 'tar', 'TAR626G1356' => 'tar', 'TAR627G0888' => 'tar', 'TAR628G0399' => 'tar', 'TAR628G1327' => 'tar', 'TAR629G2831' => 'tar', 'TAR629G2874' => 'tar', 'TAR633G1432' => 'tar', 'TAR633G2771' => 'tar', 'THA.LOC104803394' => 'tha', 'THA.LOC104805153' => 'tha', 'THA.LOC104806784' => 'tha', 'THA.LOC104810473' => 'tha', 'THA.LOC104813100' => 'tha', 'THA.LOC104814215' => 'tha', 'THA.LOC104815554' => 'tha', 'THA.LOC104820544' => 'tha', 'THA.LOC104824754' => 'tha', 'THA.LOC104827717' => 'tha', 'Thecc.02G031400' => 'tca', 'Thecc.02G055900' => 'tca', 'Thecc.02G350800' => 'tca', 'Thecc.06G150900' => 'tca', 'Thecc.06G186600' => 'tca', 'Thecc.07G089600' => 'tca', 'Thecc.08G020400' => 'tca', 'Thecc.08G182100' => 'tca', 'Thhalv10000873m.g' => 'esa', 'Thhalv10004185m.g' => 'esa', 'Thhalv10006981m.g' => 'esa', 'Thhalv10007204m.g' => 'esa', 'Thhalv10011374m.g' => 'esa', 'Thhalv10013482m.g' => 'esa', 'Thhalv10017801m.g' => 'esa', 'Thhalv10024983m.g' => 'esa', 'TPR.G12072' => 'tpr', 'TPR.G15769' => 'tpr', 'TPR.G16504' => 'tpr', 'TPR.G16506' => 'tpr', 'TPR.G24345' => 'tpr', 'TPR.G26666' => 'tpr', 'TPR.G27320' => 'tpr', 'TPR.G31819' => 'tpr', 'TPR.G38879' => 'tpr', 'TPR.G39015' => 'tpr', 'TPR.G8819' => 'tpr', 'TWI09G0924' => 'twi', 'TWI12G0811' => 'twi', 'TWI12G1294' => 'twi', 'TWI31G0150' => 'twi', 'TWI36G1262' => 'twi', 'TWI38G1287' => 'twi', 'TWI38G1633' => 'twi', 'TWI38G1982' => 'twi', 'TWI39G0116' => 'twi', 'TWI60G1011' => 'twi', 'TWI63G0171' => 'twi', 'TWI73G0839' => 'twi', 'TWI79G1511' => 'twi', 'unitig_0.g915' => 'ugi', 'unitig_0.g916' => 'ugi', 'unitig_21.g20219' => 'ugi', 'unitig_21.g20416' => 'ugi', 'unitig_578.g16132' => 'ugi', 'unitig_578.g16718' => 'ugi', 'unitig_62.g23481' => 'ugi', 'unitig_744.g24535' => 'ugi', 'unitig_749.g13525' => 'ugi', 'vmacro01248' => 'vma', 'vmacro02290' => 'vma', 'vmacro10946' => 'vma', 'vmacro11865' => 'vma', 'vmacro12493' => 'vma', 'vmacro17322' => 'vma', 'vmacro21599' => 'vma', 'vmacro23041' => 'vma', 'VMungo0251G0004' => 'vmu', 'VMungo0251G2639' => 'vmu', 'VMungo0251G2967' => 'vmu', 'VMungo0540G0864' => 'vmu', 'VMungo0540G1569' => 'vmu', 'VMungo0647G0317' => 'vmu', 'VMungo0720G1373' => 'vmu', 'VMungo0720G1508' => 'vmu', 'VMungo1080G0485' => 'vmu', 'VMungo1215G3177' => 'vmu', 'Zm00001eb112600' => 'zma', 'Zm00001eb120220' => 'zma', 'Zm00001eb153240' => 'zma', 'Zm00001eb168880' => 'zma', 'Zm00001eb213920' => 'zma', 'Zm00001eb228280' => 'zma', 'Zm00001eb254580' => 'zma', 'Zm00001eb272180' => 'zma', 'Zm00001eb293190' => 'zma', 'Zm00001eb322930' => 'zma', 'Zm00001eb353360' => 'zma', 'Zm00001eb353390' => 'zma', 'Zm00001eb353430' => 'zma', 'Zm00001eb353440' => 'zma', 'Zm00001eb353780' => 'zma' ) $gf_id = 'HOM05D000499' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000499' ) $data_identifier = 'HOM05D000499' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 29, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 12, 'amhyb' => (int) 8, 'aly' => (int) 12, 'aox' => (int) 9, 'arhy' => (int) 26, 'ath' => (int) 8, 'atr' => (int) 7, 'acertr' => (int) 10, 'cqu' => (int) 15, 'bca' => (int) 29, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 11, 'cansat' => (int) 8, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 9, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 8, 'cpa' => (int) 10, 'csa' => (int) 7, 'camsi' => (int) 20, 'dca' => (int) 8, 'din' => (int) 12, 'dzi' => (int) 14, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 6, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 38, 'gra' => (int) 16, 'vvi' => (int) 8, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 5, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 11, 'lja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 11, 'mpo' => (int) 3, 'mbi' => (int) 14, 'mdo' => (int) 14, 'mtr' => (int) 8, 'cme' => (int) 9, 'egut' => (int) 9, 'ama' => (int) 11, 'nta' => (int) 17, 'nnu' => (int) 11, 'oeu' => (int) 18, 'osa' => (int) 8, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 6, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 9, 'rsi' => (int) 9, 'sbr' => (int) 10, 'sbo' => (int) 8, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 10, 'sas' => (int) 10, 'shi' => (int) 6, 'smo' => (int) 7, 'sly' => (int) 14, 'spe' => (int) 10, 'spa' => (int) 8, 'tar' => (int) 19, 'tha' => (int) 10, 'tca' => (int) 8, 'esa' => (int) 8, 'tpr' => (int) 11, 'twi' => (int) 13, 'ugi' => (int) 9, 'vma' => (int) 8, 'vmu' => (int) 10, 'zma' => (int) 15 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb353780' $species_info = array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ) $local_species = 'col' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000499', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1066', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p29780' => 'bna', 'A02p33180' => 'bna', 'A03p16470' => 'bna', 'A03p66010' => 'bna', 'A04p25970' => 'bna', 'A06p01270' => 'bna', 'A06p46080' => 'bna', 'A07p11400' => 'bna', 'A08p01840' => 'bna', 'A08p08230' => 'bna', 'A08p25740' => 'bna', 'A09p32070' => 'bna', 'A09p37830' => 'bna', 'A09p42840' => 'bna', 'A09p42850' => 'bna', 'Aa31LG10G2060' => 'aar', 'Aa31LG2G7410' => 'aar', 'Aa31LG6G10200' => 'aar', 'Aa31LG6G16680' => 'aar', 'Aa31LG6G8470' => 'aar', 'Aa31LG9G12730' => 'aar', 'Aa31LG9G13680' => 'aar', 'Aa31LG9G14920' => 'aar', 'Aa31LG9G6650' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4977' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5467' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3254' => 'aag', 'Actinidia02578' => 'ach', 'Actinidia07693' => 'ach', 'Actinidia08413' => 'ach', 'Actinidia08414' => 'ach', 'Actinidia15289' => 'ach', 'Actinidia19871' => 'ach', 'Actinidia21475' => 'ach', 'Actinidia22576' => 'ach', 'Actinidia28327' => 'ach', 'Actinidia32491' => 'ach', 'Actinidia39463' => 'ach', 'Actinidia39571' => 'ach', 'Ah.01g013750' => 'amhyb', 'Ah.01g023210' => 'amhyb', 'Ah.04g164850' => 'amhyb', 'Ah.05g178060' => 'amhyb', 'Ah.07g204270' => 'amhyb', 'Ah.07g208480' => 'amhyb', 'Ah.09g237410' => 'amhyb', 'Ah.14g089460' => 'amhyb', 'AL1G41790' => 'aly', 'AL1G49050' => 'aly', 'AL1G53810' => 'aly', 'AL1G61400' => 'aly', 'AL4G18580' => 'aly', 'AL5G12510' => 'aly', 'AL5G12540' => 'aly', 'AL6G43230' => 'aly', 'AL7G10370' => 'aly', 'AL7G19250' => 'aly', 'AL8G12240' => 'aly', 'AL8G18540' => 'aly', 'Aqoxy1G02409' => 'aox', 'Aqoxy2G03993' => 'aox', 'Aqoxy3G03357' => 'aox', 'Aqoxy4G00785' => 'aox', 'Aqoxy5G02598' => 'aox', 'Aqoxy6G00132' => 'aox', 'Aqoxy7G01776' => 'aox', 'Aqoxy7G02316' => 'aox', 'Aqoxy7G03973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.12AFKW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B8730' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27IQR1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3F75VG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3RE0GA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41TCQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.527VTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FIR39' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5W8UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DA38EV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ63HS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H1I32C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HC27T5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4M8AP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7N3CZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9UVDZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LS1NQA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT1D4B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SKC4TM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCFV76' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF9Q1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQWD9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1ZM88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WE07RT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YCK7VH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJE6Q6' => 'arhy', 'AT1G28240' => 'ath', 'AT1G34550' => 'ath', 'AT1G53040' => 'ath', 'AT2G02910' => 'ath', 'AT4G09630' => 'ath', 'AT4G38500' => 'ath', 'AT5G42660' => 'ath', 'AT5G46220' => 'ath', 'ATR0152G026' => 'atr', 'ATR0564G343' => 'atr', 'ATR0706G151' => 'atr', 'ATR0733G207' => 'atr', 'ATR0751G234' => 'atr', 'ATR0807G048' => 'atr', 'ATR1091G084' => 'atr', 'Atru.chr10.1229' => 'acertr', 'Atru.chr10.1230' => 'acertr', 'Atru.chr10.1874' => 'acertr', 'Atru.chr11.1808' => 'acertr', 'Atru.chr13.1795' => 'acertr', 'Atru.chr13.570' => 'acertr', 'Atru.chr2.2608' => 'acertr', 'Atru.chr2.2609' => 'acertr', 'Atru.chr5.3428' => 'acertr', 'Atru.chr8.1171' => 'acertr', 'AUR62004651' => 'cqu', 'AUR62008675' => 'cqu', 'AUR62010014' => 'cqu', 'AUR62013004' => 'cqu', 'AUR62014825' => 'cqu', 'AUR62015015' => 'cqu', 'AUR62015151' => 'cqu', 'AUR62017020' => 'cqu', 'AUR62019422' => 'cqu', 'AUR62023570' => 'cqu', 'AUR62025571' => 'cqu', 'AUR62029098' => 'cqu', 'AUR62033863' => 'cqu', 'AUR62034296' => 'cqu', 'AUR62040075' => 'cqu', 'BcaB02g07334' => 'bca', 'BcaB02g10575' => 'bca', 'BcaB03g12119' => 'bca', 'BcaB03g12120' => 'bca', 'BcaB03g13945' => 'bca', 'BcaB04g17123' => 'bca', 'BcaB04g17867' => 'bca', 'BcaB04g19839' => 'bca', 'BcaB07g30317' => 'bca', 'BcaB07g32432' => 'bca', 'BcaB07g33362' => 'bca', 'BcaB08g36611' => 'bca', 'BcaC01g00028' => 'bca', 'BcaC01g01356' => 'bca', 'BcaC01g02034' => 'bca', 'BcaC01g06051' => 'bca', 'BcaC03g16839' => 'bca', 'BcaC03g17176' => 'bca', 'BcaC05g26829' => 'bca', 'BcaC06g31490' => 'bca', 'BcaC06g35344' => 'bca', 'BcaC06g36570' => 'bca', 'BcaC07g37537' => 'bca', 'BcaC08g43491' => 'bca', 'BcaC08g43773' => 'bca', 'BcaNung00234' => 'bca', 'BcaNung01982' => 'bca', 'BcaNung03707' => 'bca', 'BcaNung06454' => 'bca', 'BolC2t10762H' => 'bol', 'BolC2t11191H' => 'bol', 'BolC3t14322H' => 'bol', 'BolC3t19747H' => 'bol', 'BolC3t21425H' => 'bol', 'BolC4t27800H' => 'bol', 'BolC5t31423H' => 'bol', 'BolC6t35951H' => 'bol', 'BolC6t36282H' => 'bol', 'BolC7t40678H' => 'bol', 'BolC7t40679H' => 'bol', 'BolC7t42222H' => 'bol', 'BolC7t43492H' => 'bol', 'BolC7t46785H' => 'bol', 'BolC8t47853H' => 'bol', 'BolC9t56805H' => 'bol', 'BraA02t08000Z' => 'bra', 'BraA02t08341Z' => 'bra', 'BraA03t10936Z' => 'bra', 'BraA03t15657Z' => 'bra', 'BraA04t18100Z' => 'bra', 'BraA05t20523Z' => 'bra', 'BraA06t23353Z' => 'bra', 'BraA06t27473Z' => 'bra', 'BraA06t27769Z' => 'bra', 'BraA07t28928Z' => 'bra', 'BraA08t32236Z' => 'bra', 'BraA08t32841Z' => 'bra', 'BraA08t34524Z' => 'bra', 'BraA09t38742Z' => 'bra', 'BraA09t39295Z' => 'bra', 'C02p47180' => 'bna', 'C02p50990' => 'bna', 'C03p19360' => 'bna', 'C03p74950' => 'bna', 'C03p91000' => 'bna', 'C04p63260' => 'bna', 'C05p27050' => 'bna', 'C06p08750' => 'bna', 'C06p11490' => 'bna', 'C07p02820' => 'bna', 'C07p17180' => 'bna', 'C07p29440' => 'bna', 'C07p63730' => 'bna', 'C09p39260' => 'bna', 'CAN.G1164.34' => 'can', 'CAN.G1164.39' => 'can', 'CAN.G1530.3' => 'can', 'CAN.G162.61' => 'can', 'CAN.G176.6' => 'can', 'CAN.G289.49' => 'can', 'CAN.G370.21' => 'can', 'CAN.G370.22' => 'can', 'CAN.G371.117' => 'can', 'CAN.G58.37' => 'can', 'CAN.G588.98' => 'can', 'CANSAT21G2266' => 'cansat', 'CANSAT25G2799' => 'cansat', 'CANSAT35G0862' => 'cansat', 'CANSAT35G1704' => 'cansat', 'CANSAT35G1760' => 'cansat', 'CANSAT56G3971' => 'cansat', 'CANSAT56G4116' => 'cansat', 'CANSAT80G1259' => 'cansat', 'CARHR027730' => 'chi', 'CARHR033880' => 'chi', 'CARHR043270' => 'chi', 'CARHR145330' => 'chi', 'CARHR145340' => 'chi', 'CARHR175570' => 'chi', 'CARHR181570' => 'chi', 'CARHR258470' => 'chi', 'CARHR260490' => 'chi', 'CARHR294220' => 'chi', 'Carub.0001s2668' => 'cru', 'Carub.0001s3257' => 'cru', 'Carub.0001s4220' => 'cru', 'Carub.0005s0179' => 'cru', 'Carub.0006s2807' => 'cru', 'Carub.0007s0039' => 'cru', 'Carub.0008s0169' => 'cru', 'Carub.0008s0636' => 'cru', 'Ca_00338_v3' => 'car', 'Ca_00542_v3' => 'car', 'Ca_01844_v3' => 'car', 'Ca_10611_v3' => 'car', 'Ca_13326_v3' => 'car', 'Ca_17944_v3' => 'car', 'Ca_18546_v3' => 'car', 'Ca_24219_v3' => 'car', 'Ca_29972_v3' => 'car', 'CBR_g3681' => 'cbr', 'CBR_g40021' => 'cbr', 'Cc01_g08140' => 'ccan', 'Cc02_g13410' => 'ccan', 'Cc02_g37480' => 'ccan', 'Cc05_g12030' => 'ccan', 'Cc09_g03370' => 'ccan', 'Cc09_g10300' => 'ccan', 'Cc10_g03530' => 'ccan', 'Cc10_g11380' => 'ccan', 'CDE01G0176' => 'cde', 'CDE02G0675' => 'cde', 'CDE02G0942' => 'cde', 'CDE02G1153' => 'cde', 'CDE02G4177' => 'cde', 'CDE04G2117' => 'cde', 'CDE04G2736' => 'cde', 'CDE08G1161' => 'cde', 'CDE09G1238' => 'cde', 'Cfa000467' => 'cfa', 'Cfa000947' => 'cfa', 'Cfa004969' => 'cfa', 'Cfa005284' => 'cfa', 'Cfa008993' => 'cfa', 'Cfa018187' => 'cfa', 'Cfa018454' => 'cfa', 'Cfa020585' => 'cfa', 'Ciclev10000424m.g' => 'ccl', 'Ciclev10003605m.g' => 'ccl', 'Ciclev10007828m.g' => 'ccl', 'Ciclev10014620m.g' => 'ccl', 'Ciclev10015169m.g' => 'ccl', 'Ciclev10018291m.g' => 'ccl', 'Ciclev10028256m.g' => 'ccl', 'Ciclev10033822m.g' => 'ccl', 'CiPaw.05G060300' => 'cil', 'CiPaw.05G085000' => 'cil', 'CiPaw.06G083700' => 'cil', 'CiPaw.06G120300' => 'cil', 'CiPaw.09G060500' => 'cil', 'CiPaw.09G123800' => 'cil', 'CiPaw.11G169700' => 'cil', 'CiPaw.12G118300' => 'cil', 'CiPaw.15G071000' => 'cil', 'CiPaw.15G081900' => 'cil', 'ClCG01G024610' => 'cla', 'ClCG03G006070' => 'cla', 'ClCG05G019250' => 'cla', 'ClCG09G009500' => 'cla', 'ClCG11G008200' => 'cla', 'ClCG11G018080' => 'cla', 'COL.COLO4_17373' => 'col', 'COL.COLO4_22994' => 'col', 'COL.COLO4_26389' => 'col', 'COL.COLO4_27170' => 'col', 'COL.COLO4_31074' => 'col', 'COL.COLO4_31465' => 'col', 'COL.COLO4_36438' => 'col', 'COL.COLO4_36439' => 'col', 'Cpa.g.c38781' => 'cpa', 'Cpa.g.sc128.12' => 'cpa', 'Cpa.g.sc166.7' => 'cpa', 'Cpa.g.sc166.8' => 'cpa', 'Cpa.g.sc20.111' => 'cpa', 'Cpa.g.sc27.31' => 'cpa', 'Cpa.g.sc64.36' => 'cpa', 'Cpa.g.sc64.37' => 'cpa', 'Cpa.g.sc66.49' => 'cpa', 'Cpa.g.sc80.64' => 'cpa', 'CsaV3_1G012320' => 'csa', 'CsaV3_2G008480' => 'csa', 'CsaV3_2G033450' => 'csa', 'CsaV3_3G044830' => 'csa', 'CsaV3_4G033710' => 'csa', 'CsaV3_6G051730' => 'csa', 'CsaV3_7G025350' => 'csa', 'CSS0001067' => 'camsi', 'CSS0005996' => 'camsi', 'CSS0006590' => 'camsi', 'CSS0009673' => 'camsi', 'CSS0010201' => 'camsi', 'CSS0010549' => 'camsi', 'CSS0011364' => 'camsi', 'CSS0014473' => 'camsi', 'CSS0014961' => 'camsi', 'CSS0020191' => 'camsi', 'CSS0021165' => 'camsi', 'CSS0022306' => 'camsi', 'CSS0030591' => 'camsi', 'CSS0030696' => 'camsi', 'CSS0032653' => 'camsi', 'CSS0037487' => 'camsi', 'CSS0041102' => 'camsi', 'CSS0041261' => 'camsi', 'CSS0046246' => 'camsi', 'CSS0049256' => 'camsi', 'DCAR_004075' => 'dca', 'DCAR_011538' => 'dca', 'DCAR_019553' => 'dca', 'DCAR_020952' => 'dca', 'DCAR_021739' => 'dca', 'DCAR_027407' => 'dca', 'DCAR_027913' => 'dca', 'DCAR_028066' => 'dca', 'Dinv05899' => 'din', 'Dinv07563' => 'din', 'Dinv08010' => 'din', 'Dinv14125' => 'din', 'Dinv20172' => 'din', 'Dinv30743' => 'din', 'Dinv31229' => 'din', 'Dinv34162' => 'din', 'Dinv36028' => 'din', 'Dinv39368' => 'din', 'Dinv40565' => 'din', 'Dinv41706' => 'din', 'Duzib052G0089' => 'dzi', 'Duzib116G0641' => 'dzi', 'Duzib132G0069' => 'dzi', 'Duzib132G1219' => 'dzi', 'Duzib147G0278' => 'dzi', 'Duzib160G0480' => 'dzi', 'Duzib170G0661' => 'dzi', 'Duzib177G0591' => 'dzi', 'Duzib187G1353' => 'dzi', 'Duzib192G0858' => 'dzi', 'Duzib192G0883' => 'dzi', 'Duzib213G0506' => 'dzi', 'Duzib235G0289' => 'dzi', 'Duzib251G0422' => 'dzi', 'ECA232G3898' => 'eca', 'ECA233G5950' => 'eca', 'ECA234G1699' => 'eca', 'ECA234G2421' => 'eca', 'ECA236G0426' => 'eca', 'ECA236G4331' => 'eca', 'ECA248G2573' => 'eca', 'EL10Ac1g00077' => 'bvu', 'EL10Ac1g01746' => 'bvu', 'EL10Ac2g03464' => 'bvu', 'EL10Ac4g08176' => 'bvu', 'EL10Ac7g17521' => 'bvu', 'EL10Ac8g20386' => 'bvu', 'EL10Ac9g21343' => 'bvu', 'EL10Ac9g22688' => 'bvu', 'Eucgr.B03434' => 'egr', 'Eucgr.D00618' => 'egr', 'Eucgr.E02395' => 'egr', 'Eucgr.F01129' => 'egr', 'Eucgr.F02622' => 'egr', 'Eucgr.F04207' => 'egr', 'FAN01G0570' => 'fan', 'FAN03G3351' => 'fan', 'FAN06G3702' => 'fan', 'FAN07G2149' => 'fan', 'FAN10G3758' => 'fan', 'FAN11G1170' => 'fan', 'FAN11G2050' => 'fan', 'FAN11G2724' => 'fan', 'FAN12G1700' => 'fan', 'FAN12G2028' => 'fan', 'FAN15G1160' => 'fan', 'FAN15G3063' => 'fan', 'FAN16G2540' => 'fan', 'FAN16G3077' => 'fan', 'FAN16G3624' => 'fan', 'FAN17G0221' => 'fan', 'FAN20G2492' => 'fan', 'FAN20G2905' => 'fan', 'FAN21G0548' => 'fan', 'FAN21G1300' => 'fan', 'FAN22G0077' => 'fan', 'FAN22G1315' => 'fan', 'FAN24G1280' => 'fan', 'FAN24G1445' => 'fan', 'FAN24G3527' => 'fan', 'FAN25G0464' => 'fan', 'FAN25G2885' => 'fan', 'FAN25G3270' => 'fan', 'FAN27G1101' => 'fan', 'FAN27G2846' => 'fan', 'FAN27G3524' => 'fan', 'FvH4_2g11770' => 'fve', 'FvH4_2g15630' => 'fve', 'FvH4_3g05570' => 'fve', 'FvH4_3g09110' => 'fve', 'FvH4_3g19940' => 'fve', 'FvH4_4g04821' => 'fve', 'FvH4_4g31480' => 'fve', 'FvH4_7g01740' => 'fve', 'Glyma.05G130400' => 'gma', 'Glyma.05G156400' => 'gma', 'Glyma.07G197000' => 'gma', 'Glyma.08G085151' => 'gma', 'Glyma.08G114500' => 'gma', 'Glyma.08G300400' => 'gma', 'Glyma.10G215800' => 'gma', 'Glyma.12G224400' => 'gma', 'Glyma.13G179300' => 'gma', 'Glyma.13G218151' => 'gma', 'Glyma.13G238800' => 'gma', 'Glyma.13G276900' => 'gma', 'Glyma.14G078200' => 'gma', 'Glyma.15G074500' => 'gma', 'Glyma.15G094100' => 'gma', 'Glyma.17G247200' => 'gma', 'Glyma.18G120100' => 'gma', 'Glyma.20G176000' => 'gma', 'Gohir.A01G063600' => 'ghi', 'Gohir.A01G170301' => 'ghi', 'Gohir.A02G060500' => 'ghi', 'Gohir.A05G133850' => 'ghi', 'Gohir.A05G161400' => 'ghi', 'Gohir.A06G012900' => 'ghi', 'Gohir.A06G035901' => 'ghi', 'Gohir.A06G127100' => 'ghi', 'Gohir.A06G210500' => 'ghi', 'Gohir.A08G008650' => 'ghi', 'Gohir.A09G072700' => 'ghi', 'Gohir.A09G088301' => 'ghi', 'Gohir.A10G040600' => 'ghi', 'Gohir.A12G036300' => 'ghi', 'Gohir.A12G143350' => 'ghi', 'Gohir.A12G165500' => 'ghi', 'Gohir.A13G145700' => 'ghi', 'Gohir.D01G050000' => 'ghi', 'Gohir.D01G051366' => 'ghi', 'Gohir.D01G161350' => 'ghi', 'Gohir.D02G065900' => 'ghi', 'Gohir.D05G164200' => 'ghi', 'Gohir.D05G355500' => 'ghi', 'Gohir.D06G010400' => 'ghi', 'Gohir.D06G111250' => 'ghi', 'Gohir.D06G132000' => 'ghi', 'Gohir.D06G210500' => 'ghi', 'Gohir.D07G165675' => 'ghi', 'Gohir.D08G062240' => 'ghi', 'Gohir.D08G086101' => 'ghi', 'Gohir.D08G138060' => 'ghi', 'Gohir.D09G072300' => 'ghi', 'Gohir.D10G041400' => 'ghi', 'Gohir.D11G191020' => 'ghi', 'Gohir.D11G212066' => 'ghi', 'Gohir.D12G036300' => 'ghi', 'Gohir.D12G168600' => 'ghi', 'Gohir.D13G150600' => 'ghi', 'Gorai.001G057300' => 'gra', 'Gorai.002G069900' => 'gra', 'Gorai.002G200000' => 'gra', 'Gorai.003G067600' => 'gra', 'Gorai.005G074800' => 'gra', 'Gorai.006G087300' => 'gra', 'Gorai.008G037500' => 'gra', 'Gorai.008G181400' => 'gra', 'Gorai.009G169400' => 'gra', 'Gorai.009G387900' => 'gra', 'Gorai.010G013300' => 'gra', 'Gorai.010G153800' => 'gra', 'Gorai.010G255800' => 'gra', 'Gorai.011G043700' => 'gra', 'Gorai.011G198900' => 'gra', 'Gorai.013G168400' => 'gra', 'GSVIVG01005212001' => 'vvi', 'GSVIVG01006163001' => 'vvi', 'GSVIVG01009625001' => 'vvi', 'GSVIVG01014338001' => 'vvi', 'GSVIVG01020005001' => 'vvi', 'GSVIVG01021450001' => 'vvi', 'GSVIVG01023975001' => 'vvi', 'GSVIVG01034490001' => 'vvi', 'HanXRQChr04g0112071' => 'han', 'HanXRQChr05g0131151' => 'han', 'HanXRQChr09g0262371' => 'han', 'HanXRQChr09g0268401' => 'han', 'HanXRQChr10g0279241' => 'han', 'HanXRQChr10g0297961' => 'han', 'HanXRQChr11g0326231' => 'han', 'HanXRQChr11g0328471' => 'han', 'HanXRQChr16g0507941' => 'han', 'HanXRQChr17g0560211' => 'han', 'Haze_02108' => 'cav', 'Haze_02428' => 'cav', 'Haze_05593' => 'cav', 'Haze_06448' => 'cav', 'Haze_09427' => 'cav', 'Haze_12022' => 'cav', 'Haze_17612' => 'cav', 'Haze_17928' => 'cav', 'Hma1.2p1_0032F.1_g019250' => 'hma', 'Hma1.2p1_0163F.1_g072690' => 'hma', 'Hma1.2p1_0265F.1_g106710' => 'hma', 'Hma1.2p1_0286F.1_g113970' => 'hma', 'Hma1.2p1_0363F.1_g136640' => 'hma', 'Hma1.2p1_0584F.1_g183470' => 'hma', 'Hma1.2p1_0885F.1_g232570' => 'hma', 'HPP92_006022' => 'vpl', 'HPP92_007320' => 'vpl', 'HPP92_011521' => 'vpl', 'HPP92_019387' => 'vpl', 'HPP92_024038' => 'vpl', 'Hund05891' => 'sun', 'Hund06450' => 'sun', 'Hund12053' => 'sun', 'Hund16800' => 'sun', 'Hund21222' => 'sun', 'Hund22896' => 'sun', 'Hund23746' => 'sun', 'Hund27083' => 'sun', 'Lalb_Chr02g0141831' => 'lal', 'Lalb_Chr02g0141841' => 'lal', 'Lalb_Chr05g0220411' => 'lal', 'Lalb_Chr06g0162081' => 'lal', 'Lalb_Chr09g0327651' => 'lal', 'Lalb_Chr13g0295051' => 'lal', 'Lalb_Chr15g0086801' => 'lal', 'Lalb_Chr16g0383781' => 'lal', 'Lalb_Chr16g0383791' => 'lal', 'Lalb_Chr18g0055441' => 'lal', 'Lalb_Chr18g0059611' => 'lal', 'Lalb_Chr20g0109661' => 'lal', 'Lalb_Chr20g0109831' => 'lal', 'Lalb_Chr20g0121871' => 'lal', 'Lalb_Chr22g0355361' => 'lal', 'Lalb_Chr25g0286371' => 'lal', 'Lj1A1187G43' => 'lonja', 'Lj1A1205T50' => 'lonja', 'Lj1A800G33' => 'lonja', 'Lj1C1187T7' => 'lonja', 'Lj1C843T11' => 'lonja', 'Lj1g0010940' => 'lja', 'Lj2A288T69' => 'lonja', 'Lj3g0024276' => 'lja', 'Lj4A47T76' => 'lonja', 'Lj4g0005805' => 'lja', 'Lj4g0006097' => 'lja', 'Lj4g0008528' => 'lja', 'Lj4g0024907' => 'lja', 'Lj5g0012472' => 'lja', 'Lj5g0018648' => 'lja', 'Lj6C789G1' => 'lonja', 'Lj6g0004000' => 'lja', 'Lj7A292G67' => 'lonja', 'Lj7A292T64' => 'lonja', 'Lj9A400T58' => 'lonja', 'Lsat_1_v5_gn_1_126181' => 'lsa', 'Lsat_1_v5_gn_4_123041' => 'lsa', 'Lsat_1_v5_gn_4_133620' => 'lsa', 'Lsat_1_v5_gn_4_53221' => 'lsa', 'Lsat_1_v5_gn_4_71961' => 'lsa', 'Lsat_1_v5_gn_7_105241' => 'lsa', 'Lsat_1_v5_gn_7_21361' => 'lsa', 'Lsat_1_v5_gn_7_28860' => 'lsa', 'Lsat_1_v5_gn_7_31260' => 'lsa', 'Lsat_1_v5_gn_8_52801' => 'lsa', 'Manes.02G191400' => 'mes', 'Manes.03G110100' => 'mes', 'Manes.04G071100' => 'mes', 'Manes.05G100500' => 'mes', 'Manes.05G164700' => 'mes', 'Manes.15G087000' => 'mes', 'Manes.15G121500' => 'mes', 'Manes.16G028300' => 'mes', 'Manes.17G046100' => 'mes', 'Manes.17G069800' => 'mes', 'Manes.18G100500' => 'mes', 'Mapoly0002s0109' => 'mpo', 'Mapoly0024s0007' => 'mpo', 'Mapoly0089s0032' => 'mpo', 'MBI04_g42241_MAGBIO' => 'mbi', 'MBI05_g11988_MAGBIO' => 'mbi', 'MBI05_g35452_MAGBIO' => 'mbi', 'MBI07_g30179_MAGBIO' => 'mbi', 'MBI07_g35859_MAGBIO' => 'mbi', 'MBI07_g35860_MAGBIO' => 'mbi', 'MBI07_g37166_MAGBIO' => 'mbi', 'MBI08_g18172_MAGBIO' => 'mbi', 'MBI09_g08441_MAGBIO' => 'mbi', 'MBI13_g01676_MAGBIO' => 'mbi', 'MBI14_g42955_MAGBIO' => 'mbi', 'MBI16_g13161_MAGBIO' => 'mbi', 'MBI17_g27204_MAGBIO' => 'mbi', 'MBI19_g21595_MAGBIO' => 'mbi', 'MD00G1148400' => 'mdo', 'MD02G1301200' => 'mdo', 'MD03G1227800' => 'mdo', 'MD05G1041100' => 'mdo', 'MD05G1124800' => 'mdo', 'MD05G1284000' => 'mdo', 'MD05G1338800' => 'mdo', 'MD05G1338900' => 'mdo', 'MD07G1022800' => 'mdo', 'MD10G1047500' => 'mdo', 'MD10G1127500' => 'mdo', 'MD10G1262300' => 'mdo', 'MD10G1293800' => 'mdo', 'MD16G1074300' => 'mdo', 'Medtr1g021670' => 'mtr', 'Medtr1g096320' => 'mtr', 'Medtr2g013690' => 'mtr', 'Medtr2g019450' => 'mtr', 'Medtr2g085170' => 'mtr', 'Medtr4g088785' => 'mtr', 'Medtr8g055930' => 'mtr', 'Medtr8g085850' => 'mtr', 'MELO3C002605.2' => 'cme', 'MELO3C003891.2' => 'cme', 'MELO3C004012.2' => 'cme', 'MELO3C007134.2' => 'cme', 'MELO3C008118.2' => 'cme', 'MELO3C016700.2' => 'cme', 'MELO3C024127.2' => 'cme', 'MELO3C033361.2' => 'cme', 'MELO3C033362.2' => 'cme', 'Migut.C00430' => 'egut', 'Migut.C01246' => 'egut', 'Migut.E00101' => 'egut', 'Migut.H01486' => 'egut', 'Migut.H01939' => 'egut', 'Migut.K00360' => 'egut', 'Migut.M00910' => 'egut', 'Migut.M01139' => 'egut', 'Migut.N02677' => 'egut', 'MSTRG.13252' => 'ama', 'MSTRG.14701' => 'ama', 'MSTRG.1521' => 'ama', 'MSTRG.15884' => 'ama', 'MSTRG.16242' => 'ama', 'MSTRG.22285' => 'ama', 'MSTRG.22444' => 'ama', 'MSTRG.2349' => 'ama', 'MSTRG.26308' => 'ama', 'MSTRG.28296' => 'ama', 'MSTRG.9895' => 'ama', 'Nitab4.5_0000110g0060' => 'nta', 'Nitab4.5_0000420g0130' => 'nta', 'Nitab4.5_0000422g0030' => 'nta', 'Nitab4.5_0000560g0180' => 'nta', 'Nitab4.5_0000703g0100' => 'nta', 'Nitab4.5_0000786g0200' => 'nta', 'Nitab4.5_0001336g0020' => 'nta', 'Nitab4.5_0001796g0030' => 'nta', 'Nitab4.5_0003348g0060' => 'nta', 'Nitab4.5_0003698g0040' => 'nta', 'Nitab4.5_0003942g0090' => 'nta', 'Nitab4.5_0004775g0070' => 'nta', 'Nitab4.5_0004864g0030' => 'nta', 'Nitab4.5_0005615g0020' => 'nta', 'Nitab4.5_0009288g0030' => 'nta', 'Nitab4.5_0009341g0010' => 'nta', 'Nitab4.5_0009535g0010' => 'nta', 'Nn1g03995' => 'nnu', 'Nn1g04100' => 'nnu', 'Nn1g06530' => 'nnu', 'Nn3g16404' => 'nnu', 'Nn3g17212' => 'nnu', 'Nn3g20776' => 'nnu', 'Nn3g21923' => 'nnu', 'Nn5g27737' => 'nnu', 'Nn5g29461' => 'nnu', 'Nn7g38355' => 'nnu', 'Nn8g39873' => 'nnu', 'Oeu000548.2' => 'oeu', 'Oeu004672.1' => 'oeu', 'Oeu015605.2' => 'oeu', 'Oeu016092.1' => 'oeu', 'Oeu017879.3' => 'oeu', 'Oeu024910.1' => 'oeu', 'Oeu028965.1' => 'oeu', 'Oeu031269.1' => 'oeu', 'Oeu031270.1' => 'oeu', 'Oeu032535.1' => 'oeu', 'Oeu034151.1' => 'oeu', 'Oeu034152.1' => 'oeu', 'Oeu034588.2' => 'oeu', 'Oeu050846.1' => 'oeu', 'Oeu050849.2' => 'oeu', 'Oeu051063.2' => 'oeu', 'Oeu052368.1' => 'oeu', 'Oeu052370.1' => 'oeu', 'Os01g0210400' => 'osa', 'Os01g0304300' => 'osa', 'Os01g0749100' => 'osa', 'Os02g0745800' => 'osa', 'Os03g0769050' => 'osa', 'Os05g0531500' => 'osa', 'Os06g0724300' => 'osa', 'Os11g0198100' => 'osa', 'Peaxi162Scf00069g01425' => 'pax', 'Peaxi162Scf00280g00811' => 'pax', 'Peaxi162Scf00310g00615' => 'pax', 'Peaxi162Scf00362g00542' => 'pax', 'Peaxi162Scf00461g00310' => 'pax', 'Peaxi162Scf00530g00118' => 'pax', 'Peaxi162Scf00541g00057' => 'pax', 'Peaxi162Scf00661g00017' => 'pax', 'Peaxi162Scf00926g00027' => 'pax', 'Peaxi162Scf01064g00263' => 'pax', 'Peaxi162Scf01211g00135' => 'pax', 'PGR004G2336' => 'pgr', 'PGR042G0327' => 'pgr', 'PGR042G1957' => 'pgr', 'PGR042G2003' => 'pgr', 'PGR042G3929' => 'pgr', 'PGR083G1137' => 'pgr', 'PGR083G1364' => 'pgr', 'PGSC0003DMG400003381' => 'stu', 'PGSC0003DMG400003417' => 'stu', 'PGSC0003DMG400008981' => 'stu', 'PGSC0003DMG400012417' => 'stu', 'PGSC0003DMG400012823' => 'stu', 'PGSC0003DMG400016885' => 'stu', 'PGSC0003DMG400022812' => 'stu', 'PGSC0003DMG400029726' => 'stu', 'PGSC0003DMG401009243' => 'stu', 'PGSC0003DMG401031505' => 'stu', 'PGSC0003DMG402031505' => 'stu', 'Phvul.001G017600' => 'pvu', 'Phvul.002G193500' => 'pvu', 'Phvul.002G228900' => 'pvu', 'Phvul.002G236800' => 'pvu', 'Phvul.003G049500' => 'pvu', 'Phvul.005G072000' => 'pvu', 'Phvul.006G164800' => 'pvu', 'Phvul.006G185100' => 'pvu', 'Phvul.007G090000' => 'pvu', 'Potri.001G399800' => 'ptr', 'Potri.002G149900' => 'ptr', 'Potri.004G044100' => 'ptr', 'Potri.004G177600' => 'ptr', 'Potri.009G138000' => 'ptr', 'Potri.010G094000' => 'ptr', 'Potri.011G053000' => 'ptr', 'Potri.011G119300' => 'ptr', 'Potri.013G113700' => 'ptr', 'Potri.018G107800' => 'ptr', 'Potri.019G084100' => 'ptr', 'Pp3c14_23720' => 'ppa', 'Pp3c16_6340' => 'ppa', 'Pp3c23_13420' => 'ppa', 'Pp3c24_2740' => 'ppa', 'Pp3c25_860' => 'ppa', 'Pp3c8_21750' => 'ppa', 'Prupe.1G273000' => 'ppe', 'Prupe.1G273700' => 'ppe', 'Prupe.1G274100' => 'ppe', 'Prupe.2G023300' => 'ppe', 'Prupe.4G048000' => 'ppe', 'Prupe.4G080400' => 'ppe', 'Prupe.4G181200' => 'ppe', 'Prupe.8G056900' => 'ppe', 'Prupe.8G168700' => 'ppe', 'Psat1g189080' => 'psa', 'Psat1g204760' => 'psa', 'Psat4g175560' => 'psa', 'Psat4g177720' => 'psa', 'Psat5g244240' => 'psa', 'Psat6g010720' => 'psa', 'Psat6g187200' => 'psa', 'Psat7g072040' => 'psa', 'PSO017G3501' => 'pso', 'PSO063G2148' => 'pso', 'PSO063G5608' => 'pso', 'PSO210G6392' => 'pso', 'PSO541G2319' => 'pso', 'PSO541G2836' => 'pso', 'PSO541G4012' => 'pso', 'PSO541G6253' => 'pso', 'PSO675G0580' => 'pso', 'PSO675G0856' => 'pso', 'PSO675G5635' => 'pso', 'PSO675G9157' => 'pso', 'PSO832G1660' => 'pso', 'PSO832G1969' => 'pso', 'QL02p007186' => 'qlo', 'QL02p033904' => 'qlo', 'QL03p064391' => 'qlo', 'QL05p040593' => 'qlo', 'QL05p058242' => 'qlo', 'QL08p021825' => 'qlo', 'QL11p004981' => 'qlo', 'RcHm_v2.0_Chr1g0318301' => 'rch', 'RcHm_v2.0_Chr4g0418501' => 'rch', 'RcHm_v2.0_Chr4g0439971' => 'rch', 'RcHm_v2.0_Chr5g0008541' => 'rch', 'RcHm_v2.0_Chr5g0014101' => 'rch', 'RcHm_v2.0_Chr5g0014131' => 'rch', 'RcHm_v2.0_Chr5g0033621' => 'rch', 'RcHm_v2.0_Chr6g0272041' => 'rch', 'RcHm_v2.0_Chr6g0278831' => 'rch', 'Rhsim02G0130400' => 'rsi', 'Rhsim02G0171100' => 'rsi', 'Rhsim05G0053000' => 'rsi', 'Rhsim05G0053100' => 'rsi', 'Rhsim06G0096500' => 'rsi', 'Rhsim06G0096600' => 'rsi', 'Rhsim06G0199100' => 'rsi', 'Rhsim12G0062300' => 'rsi', 'Rhsim12G0062800' => 'rsi', 'Sabra02G0118600' => 'sbr', 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'Solyc03g079860.2' => 'sly', 'Solyc04g079770.3' => 'sly', 'Solyc05g007430.4' => 'sly', 'Solyc07g063150.3' => 'sly', 'Solyc08g016620.3' => 'sly', 'Solyc09g057590.3' => 'sly', 'Solyc09g057600.1' => 'sly', 'Solyc10g009050.3' => 'sly', 'Solyc11g017420.2' => 'sly', 'Sopen01g053810' => 'spe', 'Sopen02g023040' => 'spe', 'Sopen03g002440' => 'spe', 'Sopen04g033350' => 'spe', 'Sopen05g003310' => 'spe', 'Sopen07g004050' => 'spe', 'Sopen07g031340' => 'spe', 'Sopen08g006990' => 'spe', 'Sopen10g004830' => 'spe', 'Sopen11g009370' => 'spe', 'Sp1g24450' => 'spa', 'Sp1g29670' => 'spa', 'Sp1g39600' => 'spa', 'Sp2g11080' => 'spa', 'Sp2g13970' => 'spa', 'Sp4g16130' => 'spa', 'Sp6g13080' => 'spa', 'Sp7g37270' => 'spa', 'TAR371G0065' => 'tar', 'TAR376G0340' => 'tar', 'TAR376G0435' => 'tar', 'TAR381G0002' => 'tar', 'TAR381G1236' => 'tar', 'TAR624G0055' => 'tar', 'TAR624G0324' => 'tar', 'TAR624G0696' => 'tar', 'TAR624G0906' => 'tar', 'TAR625G0107' => 'tar', 'TAR626G0015' => 'tar', 'TAR626G1356' => 'tar', 'TAR627G0888' => 'tar', 'TAR628G0399' => 'tar', 'TAR628G1327' => 'tar', 'TAR629G2831' => 'tar', 'TAR629G2874' => 'tar', 'TAR633G1432' => 'tar', 'TAR633G2771' => 'tar', 'THA.LOC104803394' => 'tha', 'THA.LOC104805153' => 'tha', 'THA.LOC104806784' => 'tha', 'THA.LOC104810473' => 'tha', 'THA.LOC104813100' => 'tha', 'THA.LOC104814215' => 'tha', 'THA.LOC104815554' => 'tha', 'THA.LOC104820544' => 'tha', 'THA.LOC104824754' => 'tha', 'THA.LOC104827717' => 'tha', 'Thecc.02G031400' => 'tca', 'Thecc.02G055900' => 'tca', 'Thecc.02G350800' => 'tca', 'Thecc.06G150900' => 'tca', 'Thecc.06G186600' => 'tca', 'Thecc.07G089600' => 'tca', 'Thecc.08G020400' => 'tca', 'Thecc.08G182100' => 'tca', 'Thhalv10000873m.g' => 'esa', 'Thhalv10004185m.g' => 'esa', 'Thhalv10006981m.g' => 'esa', 'Thhalv10007204m.g' => 'esa', 'Thhalv10011374m.g' => 'esa', 'Thhalv10013482m.g' => 'esa', 'Thhalv10017801m.g' => 'esa', 'Thhalv10024983m.g' => 'esa', 'TPR.G12072' => 'tpr', 'TPR.G15769' => 'tpr', 'TPR.G16504' => 'tpr', 'TPR.G16506' => 'tpr', 'TPR.G24345' => 'tpr', 'TPR.G26666' => 'tpr', 'TPR.G27320' => 'tpr', 'TPR.G31819' => 'tpr', 'TPR.G38879' => 'tpr', 'TPR.G39015' => 'tpr', 'TPR.G8819' => 'tpr', 'TWI09G0924' => 'twi', 'TWI12G0811' => 'twi', 'TWI12G1294' => 'twi', 'TWI31G0150' => 'twi', 'TWI36G1262' => 'twi', 'TWI38G1287' => 'twi', 'TWI38G1633' => 'twi', 'TWI38G1982' => 'twi', 'TWI39G0116' => 'twi', 'TWI60G1011' => 'twi', 'TWI63G0171' => 'twi', 'TWI73G0839' => 'twi', 'TWI79G1511' => 'twi', 'unitig_0.g915' => 'ugi', 'unitig_0.g916' => 'ugi', 'unitig_21.g20219' => 'ugi', 'unitig_21.g20416' => 'ugi', 'unitig_578.g16132' => 'ugi', 'unitig_578.g16718' => 'ugi', 'unitig_62.g23481' => 'ugi', 'unitig_744.g24535' => 'ugi', 'unitig_749.g13525' => 'ugi', 'vmacro01248' => 'vma', 'vmacro02290' => 'vma', 'vmacro10946' => 'vma', 'vmacro11865' => 'vma', 'vmacro12493' => 'vma', 'vmacro17322' => 'vma', 'vmacro21599' => 'vma', 'vmacro23041' => 'vma', 'VMungo0251G0004' => 'vmu', 'VMungo0251G2639' => 'vmu', 'VMungo0251G2967' => 'vmu', 'VMungo0540G0864' => 'vmu', 'VMungo0540G1569' => 'vmu', 'VMungo0647G0317' => 'vmu', 'VMungo0720G1373' => 'vmu', 'VMungo0720G1508' => 'vmu', 'VMungo1080G0485' => 'vmu', 'VMungo1215G3177' => 'vmu', 'Zm00001eb112600' => 'zma', 'Zm00001eb120220' => 'zma', 'Zm00001eb153240' => 'zma', 'Zm00001eb168880' => 'zma', 'Zm00001eb213920' => 'zma', 'Zm00001eb228280' => 'zma', 'Zm00001eb254580' => 'zma', 'Zm00001eb272180' => 'zma', 'Zm00001eb293190' => 'zma', 'Zm00001eb322930' => 'zma', 'Zm00001eb353360' => 'zma', 'Zm00001eb353390' => 'zma', 'Zm00001eb353430' => 'zma', 'Zm00001eb353440' => 'zma', 'Zm00001eb353780' => 'zma' ), 'gf_id' => 'HOM05D000499', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000499' ), 'data_identifier' => 'HOM05D000499', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000499', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1066', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p29780' => 'bna', 'A02p33180' => 'bna', 'A03p16470' => 'bna', 'A03p66010' => 'bna', 'A04p25970' => 'bna', 'A06p01270' => 'bna', 'A06p46080' => 'bna', 'A07p11400' => 'bna', 'A08p01840' => 'bna', 'A08p08230' => 'bna', 'A08p25740' => 'bna', 'A09p32070' => 'bna', 'A09p37830' => 'bna', 'A09p42840' => 'bna', 'A09p42850' => 'bna', 'Aa31LG10G2060' => 'aar', 'Aa31LG2G7410' => 'aar', 'Aa31LG6G10200' => 'aar', 'Aa31LG6G16680' => 'aar', 'Aa31LG6G8470' => 'aar', 'Aa31LG9G12730' => 'aar', 'Aa31LG9G13680' => 'aar', 'Aa31LG9G14920' => 'aar', 'Aa31LG9G6650' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4977' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5467' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3254' => 'aag', 'Actinidia02578' => 'ach', 'Actinidia07693' => 'ach', 'Actinidia08413' => 'ach', 'Actinidia08414' => 'ach', 'Actinidia15289' => 'ach', 'Actinidia19871' => 'ach', 'Actinidia21475' => 'ach', 'Actinidia22576' => 'ach', 'Actinidia28327' => 'ach', 'Actinidia32491' => 'ach', 'Actinidia39463' => 'ach', 'Actinidia39571' => 'ach', 'Ah.01g013750' => 'amhyb', 'Ah.01g023210' => 'amhyb', 'Ah.04g164850' => 'amhyb', 'Ah.05g178060' => 'amhyb', 'Ah.07g204270' => 'amhyb', 'Ah.07g208480' => 'amhyb', 'Ah.09g237410' => 'amhyb', 'Ah.14g089460' => 'amhyb', 'AL1G41790' => 'aly', 'AL1G49050' => 'aly', 'AL1G53810' => 'aly', 'AL1G61400' => 'aly', 'AL4G18580' => 'aly', 'AL5G12510' => 'aly', 'AL5G12540' => 'aly', 'AL6G43230' => 'aly', 'AL7G10370' => 'aly', 'AL7G19250' => 'aly', 'AL8G12240' => 'aly', 'AL8G18540' => 'aly', 'Aqoxy1G02409' => 'aox', 'Aqoxy2G03993' => 'aox', 'Aqoxy3G03357' => 'aox', 'Aqoxy4G00785' => 'aox', 'Aqoxy5G02598' => 'aox', 'Aqoxy6G00132' => 'aox', 'Aqoxy7G01776' => 'aox', 'Aqoxy7G02316' => 'aox', 'Aqoxy7G03973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.12AFKW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B8730' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27IQR1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3F75VG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3RE0GA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41TCQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.527VTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FIR39' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5W8UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DA38EV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ63HS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H1I32C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HC27T5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4M8AP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7N3CZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9UVDZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LS1NQA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT1D4B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SKC4TM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCFV76' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF9Q1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQWD9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1ZM88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WE07RT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YCK7VH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJE6Q6' => 'arhy', 'AT1G28240' => 'ath', 'AT1G34550' => 'ath', 'AT1G53040' => 'ath', 'AT2G02910' => 'ath', 'AT4G09630' => 'ath', 'AT4G38500' => 'ath', 'AT5G42660' => 'ath', 'AT5G46220' => 'ath', 'ATR0152G026' => 'atr', 'ATR0564G343' => 'atr', 'ATR0706G151' => 'atr', 'ATR0733G207' => 'atr', 'ATR0751G234' => 'atr', 'ATR0807G048' => 'atr', 'ATR1091G084' => 'atr', 'Atru.chr10.1229' => 'acertr', 'Atru.chr10.1230' => 'acertr', 'Atru.chr10.1874' => 'acertr', 'Atru.chr11.1808' => 'acertr', 'Atru.chr13.1795' => 'acertr', 'Atru.chr13.570' => 'acertr', 'Atru.chr2.2608' => 'acertr', 'Atru.chr2.2609' => 'acertr', 'Atru.chr5.3428' => 'acertr', 'Atru.chr8.1171' => 'acertr', 'AUR62004651' => 'cqu', 'AUR62008675' => 'cqu', 'AUR62010014' => 'cqu', 'AUR62013004' => 'cqu', 'AUR62014825' => 'cqu', 'AUR62015015' => 'cqu', 'AUR62015151' => 'cqu', 'AUR62017020' => 'cqu', 'AUR62019422' => 'cqu', 'AUR62023570' => 'cqu', 'AUR62025571' => 'cqu', 'AUR62029098' => 'cqu', 'AUR62033863' => 'cqu', 'AUR62034296' => 'cqu', 'AUR62040075' => 'cqu', 'BcaB02g07334' => 'bca', 'BcaB02g10575' => 'bca', 'BcaB03g12119' => 'bca', 'BcaB03g12120' => 'bca', 'BcaB03g13945' => 'bca', 'BcaB04g17123' => 'bca', 'BcaB04g17867' => 'bca', 'BcaB04g19839' => 'bca', 'BcaB07g30317' => 'bca', 'BcaB07g32432' => 'bca', 'BcaB07g33362' => 'bca', 'BcaB08g36611' => 'bca', 'BcaC01g00028' => 'bca', 'BcaC01g01356' => 'bca', 'BcaC01g02034' => 'bca', 'BcaC01g06051' => 'bca', 'BcaC03g16839' => 'bca', 'BcaC03g17176' => 'bca', 'BcaC05g26829' => 'bca', 'BcaC06g31490' => 'bca', 'BcaC06g35344' => 'bca', 'BcaC06g36570' => 'bca', 'BcaC07g37537' => 'bca', 'BcaC08g43491' => 'bca', 'BcaC08g43773' => 'bca', 'BcaNung00234' => 'bca', 'BcaNung01982' => 'bca', 'BcaNung03707' => 'bca', 'BcaNung06454' => 'bca', 'BolC2t10762H' => 'bol', 'BolC2t11191H' => 'bol', 'BolC3t14322H' => 'bol', 'BolC3t19747H' => 'bol', 'BolC3t21425H' => 'bol', 'BolC4t27800H' => 'bol', 'BolC5t31423H' => 'bol', 'BolC6t35951H' => 'bol', 'BolC6t36282H' => 'bol', 'BolC7t40678H' => 'bol', 'BolC7t40679H' => 'bol', 'BolC7t42222H' => 'bol', 'BolC7t43492H' => 'bol', 'BolC7t46785H' => 'bol', 'BolC8t47853H' => 'bol', 'BolC9t56805H' => 'bol', 'BraA02t08000Z' => 'bra', 'BraA02t08341Z' => 'bra', 'BraA03t10936Z' => 'bra', 'BraA03t15657Z' => 'bra', 'BraA04t18100Z' => 'bra', 'BraA05t20523Z' => 'bra', 'BraA06t23353Z' => 'bra', 'BraA06t27473Z' => 'bra', 'BraA06t27769Z' => 'bra', 'BraA07t28928Z' => 'bra', 'BraA08t32236Z' => 'bra', 'BraA08t32841Z' => 'bra', 'BraA08t34524Z' => 'bra', 'BraA09t38742Z' => 'bra', 'BraA09t39295Z' => 'bra', 'C02p47180' => 'bna', 'C02p50990' => 'bna', 'C03p19360' => 'bna', 'C03p74950' => 'bna', 'C03p91000' => 'bna', 'C04p63260' => 'bna', 'C05p27050' => 'bna', 'C06p08750' => 'bna', 'C06p11490' => 'bna', 'C07p02820' => 'bna', 'C07p17180' => 'bna', 'C07p29440' => 'bna', 'C07p63730' => 'bna', 'C09p39260' => 'bna', 'CAN.G1164.34' => 'can', 'CAN.G1164.39' => 'can', 'CAN.G1530.3' => 'can', 'CAN.G162.61' => 'can', 'CAN.G176.6' => 'can', 'CAN.G289.49' => 'can', 'CAN.G370.21' => 'can', 'CAN.G370.22' => 'can', 'CAN.G371.117' => 'can', 'CAN.G58.37' => 'can', 'CAN.G588.98' => 'can', 'CANSAT21G2266' => 'cansat', 'CANSAT25G2799' => 'cansat', 'CANSAT35G0862' => 'cansat', 'CANSAT35G1704' => 'cansat', 'CANSAT35G1760' => 'cansat', 'CANSAT56G3971' => 'cansat', 'CANSAT56G4116' => 'cansat', 'CANSAT80G1259' => 'cansat', 'CARHR027730' => 'chi', 'CARHR033880' => 'chi', 'CARHR043270' => 'chi', 'CARHR145330' => 'chi', 'CARHR145340' => 'chi', 'CARHR175570' => 'chi', 'CARHR181570' => 'chi', 'CARHR258470' => 'chi', 'CARHR260490' => 'chi', 'CARHR294220' => 'chi', 'Carub.0001s2668' => 'cru', 'Carub.0001s3257' => 'cru', 'Carub.0001s4220' => 'cru', 'Carub.0005s0179' => 'cru', 'Carub.0006s2807' => 'cru', 'Carub.0007s0039' => 'cru', 'Carub.0008s0169' => 'cru', 'Carub.0008s0636' => 'cru', 'Ca_00338_v3' => 'car', 'Ca_00542_v3' => 'car', 'Ca_01844_v3' => 'car', 'Ca_10611_v3' => 'car', 'Ca_13326_v3' => 'car', 'Ca_17944_v3' => 'car', 'Ca_18546_v3' => 'car', 'Ca_24219_v3' => 'car', 'Ca_29972_v3' => 'car', 'CBR_g3681' => 'cbr', 'CBR_g40021' => 'cbr', 'Cc01_g08140' => 'ccan', 'Cc02_g13410' => 'ccan', 'Cc02_g37480' => 'ccan', 'Cc05_g12030' => 'ccan', 'Cc09_g03370' => 'ccan', 'Cc09_g10300' => 'ccan', 'Cc10_g03530' => 'ccan', 'Cc10_g11380' => 'ccan', 'CDE01G0176' => 'cde', 'CDE02G0675' => 'cde', 'CDE02G0942' => 'cde', 'CDE02G1153' => 'cde', 'CDE02G4177' => 'cde', 'CDE04G2117' => 'cde', 'CDE04G2736' => 'cde', 'CDE08G1161' => 'cde', 'CDE09G1238' => 'cde', 'Cfa000467' => 'cfa', 'Cfa000947' => 'cfa', 'Cfa004969' => 'cfa', 'Cfa005284' => 'cfa', 'Cfa008993' => 'cfa', 'Cfa018187' => 'cfa', 'Cfa018454' => 'cfa', 'Cfa020585' => 'cfa', 'Ciclev10000424m.g' => 'ccl', 'Ciclev10003605m.g' => 'ccl', 'Ciclev10007828m.g' => 'ccl', 'Ciclev10014620m.g' => 'ccl', 'Ciclev10015169m.g' => 'ccl', 'Ciclev10018291m.g' => 'ccl', 'Ciclev10028256m.g' => 'ccl', 'Ciclev10033822m.g' => 'ccl', 'CiPaw.05G060300' => 'cil', 'CiPaw.05G085000' => 'cil', 'CiPaw.06G083700' => 'cil', 'CiPaw.06G120300' => 'cil', 'CiPaw.09G060500' => 'cil', 'CiPaw.09G123800' => 'cil', 'CiPaw.11G169700' => 'cil', 'CiPaw.12G118300' => 'cil', 'CiPaw.15G071000' => 'cil', 'CiPaw.15G081900' => 'cil', 'ClCG01G024610' => 'cla', 'ClCG03G006070' => 'cla', 'ClCG05G019250' => 'cla', 'ClCG09G009500' => 'cla', 'ClCG11G008200' => 'cla', 'ClCG11G018080' => 'cla', 'COL.COLO4_17373' => 'col', 'COL.COLO4_22994' => 'col', 'COL.COLO4_26389' => 'col', 'COL.COLO4_27170' => 'col', 'COL.COLO4_31074' => 'col', 'COL.COLO4_31465' => 'col', 'COL.COLO4_36438' => 'col', 'COL.COLO4_36439' => 'col', 'Cpa.g.c38781' => 'cpa', 'Cpa.g.sc128.12' => 'cpa', 'Cpa.g.sc166.7' => 'cpa', 'Cpa.g.sc166.8' => 'cpa', 'Cpa.g.sc20.111' => 'cpa', 'Cpa.g.sc27.31' => 'cpa', 'Cpa.g.sc64.36' => 'cpa', 'Cpa.g.sc64.37' => 'cpa', 'Cpa.g.sc66.49' => 'cpa', 'Cpa.g.sc80.64' => 'cpa', 'CsaV3_1G012320' => 'csa', 'CsaV3_2G008480' => 'csa', 'CsaV3_2G033450' => 'csa', 'CsaV3_3G044830' => 'csa', 'CsaV3_4G033710' => 'csa', 'CsaV3_6G051730' => 'csa', 'CsaV3_7G025350' => 'csa', 'CSS0001067' => 'camsi', 'CSS0005996' => 'camsi', 'CSS0006590' => 'camsi', 'CSS0009673' => 'camsi', 'CSS0010201' => 'camsi', 'CSS0010549' => 'camsi', 'CSS0011364' => 'camsi', 'CSS0014473' => 'camsi', 'CSS0014961' => 'camsi', 'CSS0020191' => 'camsi', 'CSS0021165' => 'camsi', 'CSS0022306' => 'camsi', 'CSS0030591' => 'camsi', 'CSS0030696' => 'camsi', 'CSS0032653' => 'camsi', 'CSS0037487' => 'camsi', 'CSS0041102' => 'camsi', 'CSS0041261' => 'camsi', 'CSS0046246' => 'camsi', 'CSS0049256' => 'camsi', 'DCAR_004075' => 'dca', 'DCAR_011538' => 'dca', 'DCAR_019553' => 'dca', 'DCAR_020952' => 'dca', 'DCAR_021739' => 'dca', 'DCAR_027407' => 'dca', 'DCAR_027913' => 'dca', 'DCAR_028066' => 'dca', 'Dinv05899' => 'din', 'Dinv07563' => 'din', 'Dinv08010' => 'din', 'Dinv14125' => 'din', 'Dinv20172' => 'din', 'Dinv30743' => 'din', 'Dinv31229' => 'din', 'Dinv34162' => 'din', 'Dinv36028' => 'din', 'Dinv39368' => 'din', 'Dinv40565' => 'din', 'Dinv41706' => 'din', 'Duzib052G0089' => 'dzi', 'Duzib116G0641' => 'dzi', 'Duzib132G0069' => 'dzi', 'Duzib132G1219' => 'dzi', 'Duzib147G0278' => 'dzi', 'Duzib160G0480' => 'dzi', 'Duzib170G0661' => 'dzi', 'Duzib177G0591' => 'dzi', 'Duzib187G1353' => 'dzi', 'Duzib192G0858' => 'dzi', 'Duzib192G0883' => 'dzi', 'Duzib213G0506' => 'dzi', 'Duzib235G0289' => 'dzi', 'Duzib251G0422' => 'dzi', 'ECA232G3898' => 'eca', 'ECA233G5950' => 'eca', 'ECA234G1699' => 'eca', 'ECA234G2421' => 'eca', 'ECA236G0426' => 'eca', 'ECA236G4331' => 'eca', 'ECA248G2573' => 'eca', 'EL10Ac1g00077' => 'bvu', 'EL10Ac1g01746' => 'bvu', 'EL10Ac2g03464' => 'bvu', 'EL10Ac4g08176' => 'bvu', 'EL10Ac7g17521' => 'bvu', 'EL10Ac8g20386' => 'bvu', 'EL10Ac9g21343' => 'bvu', 'EL10Ac9g22688' => 'bvu', 'Eucgr.B03434' => 'egr', 'Eucgr.D00618' => 'egr', 'Eucgr.E02395' => 'egr', 'Eucgr.F01129' => 'egr', 'Eucgr.F02622' => 'egr', 'Eucgr.F04207' => 'egr', 'FAN01G0570' => 'fan', 'FAN03G3351' => 'fan', 'FAN06G3702' => 'fan', 'FAN07G2149' => 'fan', 'FAN10G3758' => 'fan', 'FAN11G1170' => 'fan', 'FAN11G2050' => 'fan', 'FAN11G2724' => 'fan', 'FAN12G1700' => 'fan', 'FAN12G2028' => 'fan', 'FAN15G1160' => 'fan', 'FAN15G3063' => 'fan', 'FAN16G2540' => 'fan', 'FAN16G3077' => 'fan', 'FAN16G3624' => 'fan', 'FAN17G0221' => 'fan', 'FAN20G2492' => 'fan', 'FAN20G2905' => 'fan', 'FAN21G0548' => 'fan', 'FAN21G1300' => 'fan', 'FAN22G0077' => 'fan', 'FAN22G1315' => 'fan', 'FAN24G1280' => 'fan', 'FAN24G1445' => 'fan', 'FAN24G3527' => 'fan', 'FAN25G0464' => 'fan', 'FAN25G2885' => 'fan', 'FAN25G3270' => 'fan', 'FAN27G1101' => 'fan', 'FAN27G2846' => 'fan', 'FAN27G3524' => 'fan', 'FvH4_2g11770' => 'fve', 'FvH4_2g15630' => 'fve', 'FvH4_3g05570' => 'fve', 'FvH4_3g09110' => 'fve', 'FvH4_3g19940' => 'fve', 'FvH4_4g04821' => 'fve', 'FvH4_4g31480' => 'fve', 'FvH4_7g01740' => 'fve', 'Glyma.05G130400' => 'gma', 'Glyma.05G156400' => 'gma', 'Glyma.07G197000' => 'gma', 'Glyma.08G085151' => 'gma', 'Glyma.08G114500' => 'gma', 'Glyma.08G300400' => 'gma', 'Glyma.10G215800' => 'gma', 'Glyma.12G224400' => 'gma', 'Glyma.13G179300' => 'gma', 'Glyma.13G218151' => 'gma', 'Glyma.13G238800' => 'gma', 'Glyma.13G276900' => 'gma', 'Glyma.14G078200' => 'gma', 'Glyma.15G074500' => 'gma', 'Glyma.15G094100' => 'gma', 'Glyma.17G247200' => 'gma', 'Glyma.18G120100' => 'gma', 'Glyma.20G176000' => 'gma', 'Gohir.A01G063600' => 'ghi', 'Gohir.A01G170301' => 'ghi', 'Gohir.A02G060500' => 'ghi', 'Gohir.A05G133850' => 'ghi', 'Gohir.A05G161400' => 'ghi', 'Gohir.A06G012900' => 'ghi', 'Gohir.A06G035901' => 'ghi', 'Gohir.A06G127100' => 'ghi', 'Gohir.A06G210500' => 'ghi', 'Gohir.A08G008650' => 'ghi', 'Gohir.A09G072700' => 'ghi', 'Gohir.A09G088301' => 'ghi', 'Gohir.A10G040600' => 'ghi', 'Gohir.A12G036300' => 'ghi', 'Gohir.A12G143350' => 'ghi', 'Gohir.A12G165500' => 'ghi', 'Gohir.A13G145700' => 'ghi', 'Gohir.D01G050000' => 'ghi', 'Gohir.D01G051366' => 'ghi', 'Gohir.D01G161350' => 'ghi', 'Gohir.D02G065900' => 'ghi', 'Gohir.D05G164200' => 'ghi', 'Gohir.D05G355500' => 'ghi', 'Gohir.D06G010400' => 'ghi', 'Gohir.D06G111250' => 'ghi', 'Gohir.D06G132000' => 'ghi', 'Gohir.D06G210500' => 'ghi', 'Gohir.D07G165675' => 'ghi', 'Gohir.D08G062240' => 'ghi', 'Gohir.D08G086101' => 'ghi', 'Gohir.D08G138060' => 'ghi', 'Gohir.D09G072300' => 'ghi', 'Gohir.D10G041400' => 'ghi', 'Gohir.D11G191020' => 'ghi', 'Gohir.D11G212066' => 'ghi', 'Gohir.D12G036300' => 'ghi', 'Gohir.D12G168600' => 'ghi', 'Gohir.D13G150600' => 'ghi', 'Gorai.001G057300' => 'gra', 'Gorai.002G069900' => 'gra', 'Gorai.002G200000' => 'gra', 'Gorai.003G067600' => 'gra', 'Gorai.005G074800' => 'gra', 'Gorai.006G087300' => 'gra', 'Gorai.008G037500' => 'gra', 'Gorai.008G181400' => 'gra', 'Gorai.009G169400' => 'gra', 'Gorai.009G387900' => 'gra', 'Gorai.010G013300' => 'gra', 'Gorai.010G153800' => 'gra', 'Gorai.010G255800' => 'gra', 'Gorai.011G043700' => 'gra', 'Gorai.011G198900' => 'gra', 'Gorai.013G168400' => 'gra', 'GSVIVG01005212001' => 'vvi', 'GSVIVG01006163001' => 'vvi', 'GSVIVG01009625001' => 'vvi', 'GSVIVG01014338001' => 'vvi', 'GSVIVG01020005001' => 'vvi', 'GSVIVG01021450001' => 'vvi', 'GSVIVG01023975001' => 'vvi', 'GSVIVG01034490001' => 'vvi', 'HanXRQChr04g0112071' => 'han', 'HanXRQChr05g0131151' => 'han', 'HanXRQChr09g0262371' => 'han', 'HanXRQChr09g0268401' => 'han', 'HanXRQChr10g0279241' => 'han', 'HanXRQChr10g0297961' => 'han', 'HanXRQChr11g0326231' => 'han', 'HanXRQChr11g0328471' => 'han', 'HanXRQChr16g0507941' => 'han', 'HanXRQChr17g0560211' => 'han', 'Haze_02108' => 'cav', 'Haze_02428' => 'cav', 'Haze_05593' => 'cav', 'Haze_06448' => 'cav', 'Haze_09427' => 'cav', 'Haze_12022' => 'cav', 'Haze_17612' => 'cav', 'Haze_17928' => 'cav', 'Hma1.2p1_0032F.1_g019250' => 'hma', 'Hma1.2p1_0163F.1_g072690' => 'hma', 'Hma1.2p1_0265F.1_g106710' => 'hma', 'Hma1.2p1_0286F.1_g113970' => 'hma', 'Hma1.2p1_0363F.1_g136640' => 'hma', 'Hma1.2p1_0584F.1_g183470' => 'hma', 'Hma1.2p1_0885F.1_g232570' => 'hma', 'HPP92_006022' => 'vpl', 'HPP92_007320' => 'vpl', 'HPP92_011521' => 'vpl', 'HPP92_019387' => 'vpl', 'HPP92_024038' => 'vpl', 'Hund05891' => 'sun', 'Hund06450' => 'sun', 'Hund12053' => 'sun', 'Hund16800' => 'sun', 'Hund21222' => 'sun', 'Hund22896' => 'sun', 'Hund23746' => 'sun', 'Hund27083' => 'sun', 'Lalb_Chr02g0141831' => 'lal', 'Lalb_Chr02g0141841' => 'lal', 'Lalb_Chr05g0220411' => 'lal', 'Lalb_Chr06g0162081' => 'lal', 'Lalb_Chr09g0327651' => 'lal', 'Lalb_Chr13g0295051' => 'lal', 'Lalb_Chr15g0086801' => 'lal', 'Lalb_Chr16g0383781' => 'lal', 'Lalb_Chr16g0383791' => 'lal', 'Lalb_Chr18g0055441' => 'lal', 'Lalb_Chr18g0059611' => 'lal', 'Lalb_Chr20g0109661' => 'lal', 'Lalb_Chr20g0109831' => 'lal', 'Lalb_Chr20g0121871' => 'lal', 'Lalb_Chr22g0355361' => 'lal', 'Lalb_Chr25g0286371' => 'lal', 'Lj1A1187G43' => 'lonja', 'Lj1A1205T50' => 'lonja', 'Lj1A800G33' => 'lonja', 'Lj1C1187T7' => 'lonja', 'Lj1C843T11' => 'lonja', 'Lj1g0010940' => 'lja', 'Lj2A288T69' => 'lonja', 'Lj3g0024276' => 'lja', 'Lj4A47T76' => 'lonja', 'Lj4g0005805' => 'lja', 'Lj4g0006097' => 'lja', 'Lj4g0008528' => 'lja', 'Lj4g0024907' => 'lja', 'Lj5g0012472' => 'lja', 'Lj5g0018648' => 'lja', 'Lj6C789G1' => 'lonja', 'Lj6g0004000' => 'lja', 'Lj7A292G67' => 'lonja', 'Lj7A292T64' => 'lonja', 'Lj9A400T58' => 'lonja', 'Lsat_1_v5_gn_1_126181' => 'lsa', 'Lsat_1_v5_gn_4_123041' => 'lsa', 'Lsat_1_v5_gn_4_133620' => 'lsa', 'Lsat_1_v5_gn_4_53221' => 'lsa', 'Lsat_1_v5_gn_4_71961' => 'lsa', 'Lsat_1_v5_gn_7_105241' => 'lsa', 'Lsat_1_v5_gn_7_21361' => 'lsa', 'Lsat_1_v5_gn_7_28860' => 'lsa', 'Lsat_1_v5_gn_7_31260' => 'lsa', 'Lsat_1_v5_gn_8_52801' => 'lsa', 'Manes.02G191400' => 'mes', 'Manes.03G110100' => 'mes', 'Manes.04G071100' => 'mes', 'Manes.05G100500' => 'mes', 'Manes.05G164700' => 'mes', 'Manes.15G087000' => 'mes', 'Manes.15G121500' => 'mes', 'Manes.16G028300' => 'mes', 'Manes.17G046100' => 'mes', 'Manes.17G069800' => 'mes', 'Manes.18G100500' => 'mes', 'Mapoly0002s0109' => 'mpo', 'Mapoly0024s0007' => 'mpo', 'Mapoly0089s0032' => 'mpo', 'MBI04_g42241_MAGBIO' => 'mbi', 'MBI05_g11988_MAGBIO' => 'mbi', 'MBI05_g35452_MAGBIO' => 'mbi', 'MBI07_g30179_MAGBIO' => 'mbi', 'MBI07_g35859_MAGBIO' => 'mbi', 'MBI07_g35860_MAGBIO' => 'mbi', 'MBI07_g37166_MAGBIO' => 'mbi', 'MBI08_g18172_MAGBIO' => 'mbi', 'MBI09_g08441_MAGBIO' => 'mbi', 'MBI13_g01676_MAGBIO' => 'mbi', 'MBI14_g42955_MAGBIO' => 'mbi', 'MBI16_g13161_MAGBIO' => 'mbi', 'MBI17_g27204_MAGBIO' => 'mbi', 'MBI19_g21595_MAGBIO' => 'mbi', 'MD00G1148400' => 'mdo', 'MD02G1301200' => 'mdo', 'MD03G1227800' => 'mdo', 'MD05G1041100' => 'mdo', 'MD05G1124800' => 'mdo', 'MD05G1284000' => 'mdo', 'MD05G1338800' => 'mdo', 'MD05G1338900' => 'mdo', 'MD07G1022800' => 'mdo', 'MD10G1047500' => 'mdo', 'MD10G1127500' => 'mdo', 'MD10G1262300' => 'mdo', 'MD10G1293800' => 'mdo', 'MD16G1074300' => 'mdo', 'Medtr1g021670' => 'mtr', 'Medtr1g096320' => 'mtr', 'Medtr2g013690' => 'mtr', 'Medtr2g019450' => 'mtr', 'Medtr2g085170' => 'mtr', 'Medtr4g088785' => 'mtr', 'Medtr8g055930' => 'mtr', 'Medtr8g085850' => 'mtr', 'MELO3C002605.2' => 'cme', 'MELO3C003891.2' => 'cme', 'MELO3C004012.2' => 'cme', 'MELO3C007134.2' => 'cme', 'MELO3C008118.2' => 'cme', 'MELO3C016700.2' => 'cme', 'MELO3C024127.2' => 'cme', 'MELO3C033361.2' => 'cme', 'MELO3C033362.2' => 'cme', 'Migut.C00430' => 'egut', 'Migut.C01246' => 'egut', 'Migut.E00101' => 'egut', 'Migut.H01486' => 'egut', 'Migut.H01939' => 'egut', 'Migut.K00360' => 'egut', 'Migut.M00910' => 'egut', 'Migut.M01139' => 'egut', 'Migut.N02677' => 'egut', 'MSTRG.13252' => 'ama', 'MSTRG.14701' => 'ama', 'MSTRG.1521' => 'ama', 'MSTRG.15884' => 'ama', 'MSTRG.16242' => 'ama', 'MSTRG.22285' => 'ama', 'MSTRG.22444' => 'ama', 'MSTRG.2349' => 'ama', 'MSTRG.26308' => 'ama', 'MSTRG.28296' => 'ama', 'MSTRG.9895' => 'ama', 'Nitab4.5_0000110g0060' => 'nta', 'Nitab4.5_0000420g0130' => 'nta', 'Nitab4.5_0000422g0030' => 'nta', 'Nitab4.5_0000560g0180' => 'nta', 'Nitab4.5_0000703g0100' => 'nta', 'Nitab4.5_0000786g0200' => 'nta', 'Nitab4.5_0001336g0020' => 'nta', 'Nitab4.5_0001796g0030' => 'nta', 'Nitab4.5_0003348g0060' => 'nta', 'Nitab4.5_0003698g0040' => 'nta', 'Nitab4.5_0003942g0090' => 'nta', 'Nitab4.5_0004775g0070' => 'nta', 'Nitab4.5_0004864g0030' => 'nta', 'Nitab4.5_0005615g0020' => 'nta', 'Nitab4.5_0009288g0030' => 'nta', 'Nitab4.5_0009341g0010' => 'nta', 'Nitab4.5_0009535g0010' => 'nta', 'Nn1g03995' => 'nnu', 'Nn1g04100' => 'nnu', 'Nn1g06530' => 'nnu', 'Nn3g16404' => 'nnu', 'Nn3g17212' => 'nnu', 'Nn3g20776' => 'nnu', 'Nn3g21923' => 'nnu', 'Nn5g27737' => 'nnu', 'Nn5g29461' => 'nnu', 'Nn7g38355' => 'nnu', 'Nn8g39873' => 'nnu', 'Oeu000548.2' => 'oeu', 'Oeu004672.1' => 'oeu', 'Oeu015605.2' => 'oeu', 'Oeu016092.1' => 'oeu', 'Oeu017879.3' => 'oeu', 'Oeu024910.1' => 'oeu', 'Oeu028965.1' => 'oeu', 'Oeu031269.1' => 'oeu', 'Oeu031270.1' => 'oeu', 'Oeu032535.1' => 'oeu', 'Oeu034151.1' => 'oeu', 'Oeu034152.1' => 'oeu', 'Oeu034588.2' => 'oeu', 'Oeu050846.1' => 'oeu', 'Oeu050849.2' => 'oeu', 'Oeu051063.2' => 'oeu', 'Oeu052368.1' => 'oeu', 'Oeu052370.1' => 'oeu', 'Os01g0210400' => 'osa', 'Os01g0304300' => 'osa', 'Os01g0749100' => 'osa', 'Os02g0745800' => 'osa', 'Os03g0769050' => 'osa', 'Os05g0531500' => 'osa', 'Os06g0724300' => 'osa', 'Os11g0198100' => 'osa', 'Peaxi162Scf00069g01425' => 'pax', 'Peaxi162Scf00280g00811' => 'pax', 'Peaxi162Scf00310g00615' => 'pax', 'Peaxi162Scf00362g00542' => 'pax', 'Peaxi162Scf00461g00310' => 'pax', 'Peaxi162Scf00530g00118' => 'pax', 'Peaxi162Scf00541g00057' => 'pax', 'Peaxi162Scf00661g00017' => 'pax', 'Peaxi162Scf00926g00027' => 'pax', 'Peaxi162Scf01064g00263' => 'pax', 'Peaxi162Scf01211g00135' => 'pax', 'PGR004G2336' => 'pgr', 'PGR042G0327' => 'pgr', 'PGR042G1957' => 'pgr', 'PGR042G2003' => 'pgr', 'PGR042G3929' => 'pgr', 'PGR083G1137' => 'pgr', 'PGR083G1364' => 'pgr', 'PGSC0003DMG400003381' => 'stu', 'PGSC0003DMG400003417' => 'stu', 'PGSC0003DMG400008981' => 'stu', 'PGSC0003DMG400012417' => 'stu', 'PGSC0003DMG400012823' => 'stu', 'PGSC0003DMG400016885' => 'stu', 'PGSC0003DMG400022812' => 'stu', 'PGSC0003DMG400029726' => 'stu', 'PGSC0003DMG401009243' => 'stu', 'PGSC0003DMG401031505' => 'stu', 'PGSC0003DMG402031505' => 'stu', 'Phvul.001G017600' => 'pvu', 'Phvul.002G193500' => 'pvu', 'Phvul.002G228900' => 'pvu', 'Phvul.002G236800' => 'pvu', 'Phvul.003G049500' => 'pvu', 'Phvul.005G072000' => 'pvu', 'Phvul.006G164800' => 'pvu', 'Phvul.006G185100' => 'pvu', 'Phvul.007G090000' => 'pvu', 'Potri.001G399800' => 'ptr', 'Potri.002G149900' => 'ptr', 'Potri.004G044100' => 'ptr', 'Potri.004G177600' => 'ptr', 'Potri.009G138000' => 'ptr', 'Potri.010G094000' => 'ptr', 'Potri.011G053000' => 'ptr', 'Potri.011G119300' => 'ptr', 'Potri.013G113700' => 'ptr', 'Potri.018G107800' => 'ptr', 'Potri.019G084100' => 'ptr', 'Pp3c14_23720' => 'ppa', 'Pp3c16_6340' => 'ppa', 'Pp3c23_13420' => 'ppa', 'Pp3c24_2740' => 'ppa', 'Pp3c25_860' => 'ppa', 'Pp3c8_21750' => 'ppa', 'Prupe.1G273000' => 'ppe', 'Prupe.1G273700' => 'ppe', 'Prupe.1G274100' => 'ppe', 'Prupe.2G023300' => 'ppe', 'Prupe.4G048000' => 'ppe', 'Prupe.4G080400' => 'ppe', 'Prupe.4G181200' => 'ppe', 'Prupe.8G056900' => 'ppe', 'Prupe.8G168700' => 'ppe', 'Psat1g189080' => 'psa', 'Psat1g204760' => 'psa', 'Psat4g175560' => 'psa', 'Psat4g177720' => 'psa', 'Psat5g244240' => 'psa', 'Psat6g010720' => 'psa', 'Psat6g187200' => 'psa', 'Psat7g072040' => 'psa', 'PSO017G3501' => 'pso', 'PSO063G2148' => 'pso', 'PSO063G5608' => 'pso', 'PSO210G6392' => 'pso', 'PSO541G2319' => 'pso', 'PSO541G2836' => 'pso', 'PSO541G4012' => 'pso', 'PSO541G6253' => 'pso', 'PSO675G0580' => 'pso', 'PSO675G0856' => 'pso', 'PSO675G5635' => 'pso', 'PSO675G9157' => 'pso', 'PSO832G1660' => 'pso', 'PSO832G1969' => 'pso', 'QL02p007186' => 'qlo', 'QL02p033904' => 'qlo', 'QL03p064391' => 'qlo', 'QL05p040593' => 'qlo', 'QL05p058242' => 'qlo', 'QL08p021825' => 'qlo', 'QL11p004981' => 'qlo', 'RcHm_v2.0_Chr1g0318301' => 'rch', 'RcHm_v2.0_Chr4g0418501' => 'rch', 'RcHm_v2.0_Chr4g0439971' => 'rch', 'RcHm_v2.0_Chr5g0008541' => 'rch', 'RcHm_v2.0_Chr5g0014101' => 'rch', 'RcHm_v2.0_Chr5g0014131' => 'rch', 'RcHm_v2.0_Chr5g0033621' => 'rch', 'RcHm_v2.0_Chr6g0272041' => 'rch', 'RcHm_v2.0_Chr6g0278831' => 'rch', 'Rhsim02G0130400' => 'rsi', 'Rhsim02G0171100' => 'rsi', 'Rhsim05G0053000' => 'rsi', 'Rhsim05G0053100' => 'rsi', 'Rhsim06G0096500' => 'rsi', 'Rhsim06G0096600' => 'rsi', 'Rhsim06G0199100' => 'rsi', 'Rhsim12G0062300' => 'rsi', 'Rhsim12G0062800' => 'rsi', 'Sabra02G0118600' => 'sbr', 'Sabra04G0027300' => 'sbr', 'Sabra04G0119500' => 'sbr', 'Sabra08G0112500' => 'sbr', 'Sabra11G0036800' => 'sbr', 'Sabra11G0103800' => 'sbr', 'Sabra13G0096300' => 'sbr', 'Sabra16G0262300' => 'sbr', 'Sabra18G0091700' => 'sbr', 'Sabra19G0095400' => 'sbr', 'SalBow6G3080' => 'sbo', 'SalBow7G1157' => 'sbo', 'SalBow7G2123' => 'sbo', 'SalBow7G2285' => 'sbo', 'SalBow7G3537' => 'sbo', 'SalBow8G2947' => 'sbo', 'SalBow8G4463' => 'sbo', 'SalBow8G5466' => 'sbo', 'Sc01g0001750' => 'sci', 'Sc02g0006640' => 'sci', 'Sc02g0006670' => 'sci', 'Sc04g0008220' => 'sci', 'Sc05g0006190' => 'sci', 'Sc08g0002760' => 'sci', 'Sc17g0006170' => 'sci', 'Sc22g0002050' => 'sci', 'Sc23g0001190' => 'sci', 'Sc24g0000980' => 'sci', 'Sed0006245' => 'sed', 'Sed0007543' => 'sed', 'Sed0009411' => 'sed', 'Sed0010765' => 'sed', 'Sed0012944' => 'sed', 'Sed0014682' => 'sed', 'Sed0016174' => 'sed', 'Sed0016796' => 'sed', 'Sed0020317' => 'sed', 'Sed0021467' => 'sed', 'SEGI_01316' => 'sgi', 'SEGI_03374' => 'sgi', 'SEGI_16265' => 'sgi', 'SEGI_18569' => 'sgi', 'SEGI_20351' => 'sgi', 'SEGI_26395' => 'sgi', 'SEGI_29469' => 'sgi', 'SEGI_34771' => 'sgi', 'SEGI_36769' => 'sgi', 'SEGI_37139' => 'sgi', 'SGA_v2.0_scaffold100G29687' => 'sas', 'SGA_v2.0_scaffold118G32472' => 'sas', 'SGA_v2.0_scaffold14G07051' => 'sas', 'SGA_v2.0_scaffold183G39845' => 'sas', 'SGA_v2.0_scaffold1G00174' => 'sas', 'SGA_v2.0_scaffold22G09714' => 'sas', 'SGA_v2.0_scaffold333G48992' => 'sas', 'SGA_v2.0_scaffold46G17491' => 'sas', 'SGA_v2.0_scaffold49G18294' => 'sas', 'SGA_v2.0_scaffold63G21658' => 'sas', 'SHI01741' => 'shi', 'SHI05771' => 'shi', 'SHI18077' => 'shi', 'SHI20525' => 'shi', 'SHI20527' => 'shi', 'SHI20528' => 'shi', 'SMO172G0185' => 'smo', 'SMO198G0020' => 'smo', 'SMO351G0006' => 'smo', 'SMO356G0118' => 'smo', 'SMO358G0296' => 'smo', 'SMO367G0079' => 'smo', 'SMO367G1277' => 'smo', 'Solyc01g014220.3' => 'sly', 'Solyc01g111770.2' => 'sly', 'Solyc02g078180.3' => 'sly', 'Solyc03g006430.3' => 'sly', 'Solyc03g006456.1' => 'sly', 'Solyc03g079860.2' => 'sly', 'Solyc04g079770.3' => 'sly', 'Solyc05g007430.4' => 'sly', 'Solyc07g063150.3' => 'sly', 'Solyc08g016620.3' => 'sly', 'Solyc09g057590.3' => 'sly', 'Solyc09g057600.1' => 'sly', 'Solyc10g009050.3' => 'sly', 'Solyc11g017420.2' => 'sly', 'Sopen01g053810' => 'spe', 'Sopen02g023040' => 'spe', 'Sopen03g002440' => 'spe', 'Sopen04g033350' => 'spe', 'Sopen05g003310' => 'spe', 'Sopen07g004050' => 'spe', 'Sopen07g031340' => 'spe', 'Sopen08g006990' => 'spe', 'Sopen10g004830' => 'spe', 'Sopen11g009370' => 'spe', 'Sp1g24450' => 'spa', 'Sp1g29670' => 'spa', 'Sp1g39600' => 'spa', 'Sp2g11080' => 'spa', 'Sp2g13970' => 'spa', 'Sp4g16130' => 'spa', 'Sp6g13080' => 'spa', 'Sp7g37270' => 'spa', 'TAR371G0065' => 'tar', 'TAR376G0340' => 'tar', 'TAR376G0435' => 'tar', 'TAR381G0002' => 'tar', 'TAR381G1236' => 'tar', 'TAR624G0055' => 'tar', 'TAR624G0324' => 'tar', 'TAR624G0696' => 'tar', 'TAR624G0906' => 'tar', 'TAR625G0107' => 'tar', 'TAR626G0015' => 'tar', 'TAR626G1356' => 'tar', 'TAR627G0888' => 'tar', 'TAR628G0399' => 'tar', 'TAR628G1327' => 'tar', 'TAR629G2831' => 'tar', 'TAR629G2874' => 'tar', 'TAR633G1432' => 'tar', 'TAR633G2771' => 'tar', 'THA.LOC104803394' => 'tha', 'THA.LOC104805153' => 'tha', 'THA.LOC104806784' => 'tha', 'THA.LOC104810473' => 'tha', 'THA.LOC104813100' => 'tha', 'THA.LOC104814215' => 'tha', 'THA.LOC104815554' => 'tha', 'THA.LOC104820544' => 'tha', 'THA.LOC104824754' => 'tha', 'THA.LOC104827717' => 'tha', 'Thecc.02G031400' => 'tca', 'Thecc.02G055900' => 'tca', 'Thecc.02G350800' => 'tca', 'Thecc.06G150900' => 'tca', 'Thecc.06G186600' => 'tca', 'Thecc.07G089600' => 'tca', 'Thecc.08G020400' => 'tca', 'Thecc.08G182100' => 'tca', 'Thhalv10000873m.g' => 'esa', 'Thhalv10004185m.g' => 'esa', 'Thhalv10006981m.g' => 'esa', 'Thhalv10007204m.g' => 'esa', 'Thhalv10011374m.g' => 'esa', 'Thhalv10013482m.g' => 'esa', 'Thhalv10017801m.g' => 'esa', 'Thhalv10024983m.g' => 'esa', 'TPR.G12072' => 'tpr', 'TPR.G15769' => 'tpr', 'TPR.G16504' => 'tpr', 'TPR.G16506' => 'tpr', 'TPR.G24345' => 'tpr', 'TPR.G26666' => 'tpr', 'TPR.G27320' => 'tpr', 'TPR.G31819' => 'tpr', 'TPR.G38879' => 'tpr', 'TPR.G39015' => 'tpr', 'TPR.G8819' => 'tpr', 'TWI09G0924' => 'twi', 'TWI12G0811' => 'twi', 'TWI12G1294' => 'twi', 'TWI31G0150' => 'twi', 'TWI36G1262' => 'twi', 'TWI38G1287' => 'twi', 'TWI38G1633' => 'twi', 'TWI38G1982' => 'twi', 'TWI39G0116' => 'twi', 'TWI60G1011' => 'twi', 'TWI63G0171' => 'twi', 'TWI73G0839' => 'twi', 'TWI79G1511' => 'twi', 'unitig_0.g915' => 'ugi', 'unitig_0.g916' => 'ugi', 'unitig_21.g20219' => 'ugi', 'unitig_21.g20416' => 'ugi', 'unitig_578.g16132' => 'ugi', 'unitig_578.g16718' => 'ugi', 'unitig_62.g23481' => 'ugi', 'unitig_744.g24535' => 'ugi', 'unitig_749.g13525' => 'ugi', 'vmacro01248' => 'vma', 'vmacro02290' => 'vma', 'vmacro10946' => 'vma', 'vmacro11865' => 'vma', 'vmacro12493' => 'vma', 'vmacro17322' => 'vma', 'vmacro21599' => 'vma', 'vmacro23041' => 'vma', 'VMungo0251G0004' => 'vmu', 'VMungo0251G2639' => 'vmu', 'VMungo0251G2967' => 'vmu', 'VMungo0540G0864' => 'vmu', 'VMungo0540G1569' => 'vmu', 'VMungo0647G0317' => 'vmu', 'VMungo0720G1373' => 'vmu', 'VMungo0720G1508' => 'vmu', 'VMungo1080G0485' => 'vmu', 'VMungo1215G3177' => 'vmu', 'Zm00001eb112600' => 'zma', 'Zm00001eb120220' => 'zma', 'Zm00001eb153240' => 'zma', 'Zm00001eb168880' => 'zma', 'Zm00001eb213920' => 'zma', 'Zm00001eb228280' => 'zma', 'Zm00001eb254580' => 'zma', 'Zm00001eb272180' => 'zma', 'Zm00001eb293190' => 'zma', 'Zm00001eb322930' => 'zma', 'Zm00001eb353360' => 'zma', 'Zm00001eb353390' => 'zma', 'Zm00001eb353430' => 'zma', 'Zm00001eb353440' => 'zma', 'Zm00001eb353780' => 'zma' ) $gf_id = 'HOM05D000499' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000499' ) $data_identifier = 'HOM05D000499' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 29, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 12, 'amhyb' => (int) 8, 'aly' => (int) 12, 'aox' => (int) 9, 'arhy' => (int) 26, 'ath' => (int) 8, 'atr' => (int) 7, 'acertr' => (int) 10, 'cqu' => (int) 15, 'bca' => (int) 29, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 11, 'cansat' => (int) 8, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 9, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 8, 'cpa' => (int) 10, 'csa' => (int) 7, 'camsi' => (int) 20, 'dca' => (int) 8, 'din' => (int) 12, 'dzi' => (int) 14, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 6, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 38, 'gra' => (int) 16, 'vvi' => (int) 8, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 5, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 11, 'lja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 11, 'mpo' => (int) 3, 'mbi' => (int) 14, 'mdo' => (int) 14, 'mtr' => (int) 8, 'cme' => (int) 9, 'egut' => (int) 9, 'ama' => (int) 11, 'nta' => (int) 17, 'nnu' => (int) 11, 'oeu' => (int) 18, 'osa' => (int) 8, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 6, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 9, 'rsi' => (int) 9, 'sbr' => (int) 10, 'sbo' => (int) 8, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 10, 'sas' => (int) 10, 'shi' => (int) 6, 'smo' => (int) 7, 'sly' => (int) 14, 'spe' => (int) 10, 'spa' => (int) 8, 'tar' => (int) 19, 'tha' => (int) 10, 'tca' => (int) 8, 'esa' => (int) 8, 'tpr' => (int) 11, 'twi' => (int) 13, 'ugi' => (int) 9, 'vma' => (int) 8, 'vmu' => (int) 10, 'zma' => (int) 15 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb353780' $species_info = array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ) $local_species = 'cav' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000499', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1066', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p29780' => 'bna', 'A02p33180' => 'bna', 'A03p16470' => 'bna', 'A03p66010' => 'bna', 'A04p25970' => 'bna', 'A06p01270' => 'bna', 'A06p46080' => 'bna', 'A07p11400' => 'bna', 'A08p01840' => 'bna', 'A08p08230' => 'bna', 'A08p25740' => 'bna', 'A09p32070' => 'bna', 'A09p37830' => 'bna', 'A09p42840' => 'bna', 'A09p42850' => 'bna', 'Aa31LG10G2060' => 'aar', 'Aa31LG2G7410' => 'aar', 'Aa31LG6G10200' => 'aar', 'Aa31LG6G16680' => 'aar', 'Aa31LG6G8470' => 'aar', 'Aa31LG9G12730' => 'aar', 'Aa31LG9G13680' => 'aar', 'Aa31LG9G14920' => 'aar', 'Aa31LG9G6650' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4977' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5467' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3254' => 'aag', 'Actinidia02578' => 'ach', 'Actinidia07693' => 'ach', 'Actinidia08413' => 'ach', 'Actinidia08414' => 'ach', 'Actinidia15289' => 'ach', 'Actinidia19871' => 'ach', 'Actinidia21475' => 'ach', 'Actinidia22576' => 'ach', 'Actinidia28327' => 'ach', 'Actinidia32491' => 'ach', 'Actinidia39463' => 'ach', 'Actinidia39571' => 'ach', 'Ah.01g013750' => 'amhyb', 'Ah.01g023210' => 'amhyb', 'Ah.04g164850' => 'amhyb', 'Ah.05g178060' => 'amhyb', 'Ah.07g204270' => 'amhyb', 'Ah.07g208480' => 'amhyb', 'Ah.09g237410' => 'amhyb', 'Ah.14g089460' => 'amhyb', 'AL1G41790' => 'aly', 'AL1G49050' => 'aly', 'AL1G53810' => 'aly', 'AL1G61400' => 'aly', 'AL4G18580' => 'aly', 'AL5G12510' => 'aly', 'AL5G12540' => 'aly', 'AL6G43230' => 'aly', 'AL7G10370' => 'aly', 'AL7G19250' => 'aly', 'AL8G12240' => 'aly', 'AL8G18540' => 'aly', 'Aqoxy1G02409' => 'aox', 'Aqoxy2G03993' => 'aox', 'Aqoxy3G03357' => 'aox', 'Aqoxy4G00785' => 'aox', 'Aqoxy5G02598' => 'aox', 'Aqoxy6G00132' => 'aox', 'Aqoxy7G01776' => 'aox', 'Aqoxy7G02316' => 'aox', 'Aqoxy7G03973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.12AFKW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B8730' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27IQR1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3F75VG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3RE0GA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41TCQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.527VTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FIR39' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5W8UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DA38EV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ63HS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H1I32C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HC27T5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4M8AP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7N3CZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9UVDZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LS1NQA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT1D4B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SKC4TM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCFV76' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF9Q1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQWD9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1ZM88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WE07RT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YCK7VH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJE6Q6' => 'arhy', 'AT1G28240' => 'ath', 'AT1G34550' => 'ath', 'AT1G53040' => 'ath', 'AT2G02910' => 'ath', 'AT4G09630' => 'ath', 'AT4G38500' => 'ath', 'AT5G42660' => 'ath', 'AT5G46220' => 'ath', 'ATR0152G026' => 'atr', 'ATR0564G343' => 'atr', 'ATR0706G151' => 'atr', 'ATR0733G207' => 'atr', 'ATR0751G234' => 'atr', 'ATR0807G048' => 'atr', 'ATR1091G084' => 'atr', 'Atru.chr10.1229' => 'acertr', 'Atru.chr10.1230' => 'acertr', 'Atru.chr10.1874' => 'acertr', 'Atru.chr11.1808' => 'acertr', 'Atru.chr13.1795' => 'acertr', 'Atru.chr13.570' => 'acertr', 'Atru.chr2.2608' => 'acertr', 'Atru.chr2.2609' => 'acertr', 'Atru.chr5.3428' => 'acertr', 'Atru.chr8.1171' => 'acertr', 'AUR62004651' => 'cqu', 'AUR62008675' => 'cqu', 'AUR62010014' => 'cqu', 'AUR62013004' => 'cqu', 'AUR62014825' => 'cqu', 'AUR62015015' => 'cqu', 'AUR62015151' => 'cqu', 'AUR62017020' => 'cqu', 'AUR62019422' => 'cqu', 'AUR62023570' => 'cqu', 'AUR62025571' => 'cqu', 'AUR62029098' => 'cqu', 'AUR62033863' => 'cqu', 'AUR62034296' => 'cqu', 'AUR62040075' => 'cqu', 'BcaB02g07334' => 'bca', 'BcaB02g10575' => 'bca', 'BcaB03g12119' => 'bca', 'BcaB03g12120' => 'bca', 'BcaB03g13945' => 'bca', 'BcaB04g17123' => 'bca', 'BcaB04g17867' => 'bca', 'BcaB04g19839' => 'bca', 'BcaB07g30317' => 'bca', 'BcaB07g32432' => 'bca', 'BcaB07g33362' => 'bca', 'BcaB08g36611' => 'bca', 'BcaC01g00028' => 'bca', 'BcaC01g01356' => 'bca', 'BcaC01g02034' => 'bca', 'BcaC01g06051' => 'bca', 'BcaC03g16839' => 'bca', 'BcaC03g17176' => 'bca', 'BcaC05g26829' => 'bca', 'BcaC06g31490' => 'bca', 'BcaC06g35344' => 'bca', 'BcaC06g36570' => 'bca', 'BcaC07g37537' => 'bca', 'BcaC08g43491' => 'bca', 'BcaC08g43773' => 'bca', 'BcaNung00234' => 'bca', 'BcaNung01982' => 'bca', 'BcaNung03707' => 'bca', 'BcaNung06454' => 'bca', 'BolC2t10762H' => 'bol', 'BolC2t11191H' => 'bol', 'BolC3t14322H' => 'bol', 'BolC3t19747H' => 'bol', 'BolC3t21425H' => 'bol', 'BolC4t27800H' => 'bol', 'BolC5t31423H' => 'bol', 'BolC6t35951H' => 'bol', 'BolC6t36282H' => 'bol', 'BolC7t40678H' => 'bol', 'BolC7t40679H' => 'bol', 'BolC7t42222H' => 'bol', 'BolC7t43492H' => 'bol', 'BolC7t46785H' => 'bol', 'BolC8t47853H' => 'bol', 'BolC9t56805H' => 'bol', 'BraA02t08000Z' => 'bra', 'BraA02t08341Z' => 'bra', 'BraA03t10936Z' => 'bra', 'BraA03t15657Z' => 'bra', 'BraA04t18100Z' => 'bra', 'BraA05t20523Z' => 'bra', 'BraA06t23353Z' => 'bra', 'BraA06t27473Z' => 'bra', 'BraA06t27769Z' => 'bra', 'BraA07t28928Z' => 'bra', 'BraA08t32236Z' => 'bra', 'BraA08t32841Z' => 'bra', 'BraA08t34524Z' => 'bra', 'BraA09t38742Z' => 'bra', 'BraA09t39295Z' => 'bra', 'C02p47180' => 'bna', 'C02p50990' => 'bna', 'C03p19360' => 'bna', 'C03p74950' => 'bna', 'C03p91000' => 'bna', 'C04p63260' => 'bna', 'C05p27050' => 'bna', 'C06p08750' => 'bna', 'C06p11490' => 'bna', 'C07p02820' => 'bna', 'C07p17180' => 'bna', 'C07p29440' => 'bna', 'C07p63730' => 'bna', 'C09p39260' => 'bna', 'CAN.G1164.34' => 'can', 'CAN.G1164.39' => 'can', 'CAN.G1530.3' => 'can', 'CAN.G162.61' => 'can', 'CAN.G176.6' => 'can', 'CAN.G289.49' => 'can', 'CAN.G370.21' => 'can', 'CAN.G370.22' => 'can', 'CAN.G371.117' => 'can', 'CAN.G58.37' => 'can', 'CAN.G588.98' => 'can', 'CANSAT21G2266' => 'cansat', 'CANSAT25G2799' => 'cansat', 'CANSAT35G0862' => 'cansat', 'CANSAT35G1704' => 'cansat', 'CANSAT35G1760' => 'cansat', 'CANSAT56G3971' => 'cansat', 'CANSAT56G4116' => 'cansat', 'CANSAT80G1259' => 'cansat', 'CARHR027730' => 'chi', 'CARHR033880' => 'chi', 'CARHR043270' => 'chi', 'CARHR145330' => 'chi', 'CARHR145340' => 'chi', 'CARHR175570' => 'chi', 'CARHR181570' => 'chi', 'CARHR258470' => 'chi', 'CARHR260490' => 'chi', 'CARHR294220' => 'chi', 'Carub.0001s2668' => 'cru', 'Carub.0001s3257' => 'cru', 'Carub.0001s4220' => 'cru', 'Carub.0005s0179' => 'cru', 'Carub.0006s2807' => 'cru', 'Carub.0007s0039' => 'cru', 'Carub.0008s0169' => 'cru', 'Carub.0008s0636' => 'cru', 'Ca_00338_v3' => 'car', 'Ca_00542_v3' => 'car', 'Ca_01844_v3' => 'car', 'Ca_10611_v3' => 'car', 'Ca_13326_v3' => 'car', 'Ca_17944_v3' => 'car', 'Ca_18546_v3' => 'car', 'Ca_24219_v3' => 'car', 'Ca_29972_v3' => 'car', 'CBR_g3681' => 'cbr', 'CBR_g40021' => 'cbr', 'Cc01_g08140' => 'ccan', 'Cc02_g13410' => 'ccan', 'Cc02_g37480' => 'ccan', 'Cc05_g12030' => 'ccan', 'Cc09_g03370' => 'ccan', 'Cc09_g10300' => 'ccan', 'Cc10_g03530' => 'ccan', 'Cc10_g11380' => 'ccan', 'CDE01G0176' => 'cde', 'CDE02G0675' => 'cde', 'CDE02G0942' => 'cde', 'CDE02G1153' => 'cde', 'CDE02G4177' => 'cde', 'CDE04G2117' => 'cde', 'CDE04G2736' => 'cde', 'CDE08G1161' => 'cde', 'CDE09G1238' => 'cde', 'Cfa000467' => 'cfa', 'Cfa000947' => 'cfa', 'Cfa004969' => 'cfa', 'Cfa005284' => 'cfa', 'Cfa008993' => 'cfa', 'Cfa018187' => 'cfa', 'Cfa018454' => 'cfa', 'Cfa020585' => 'cfa', 'Ciclev10000424m.g' => 'ccl', 'Ciclev10003605m.g' => 'ccl', 'Ciclev10007828m.g' => 'ccl', 'Ciclev10014620m.g' => 'ccl', 'Ciclev10015169m.g' => 'ccl', 'Ciclev10018291m.g' => 'ccl', 'Ciclev10028256m.g' => 'ccl', 'Ciclev10033822m.g' => 'ccl', 'CiPaw.05G060300' => 'cil', 'CiPaw.05G085000' => 'cil', 'CiPaw.06G083700' => 'cil', 'CiPaw.06G120300' => 'cil', 'CiPaw.09G060500' => 'cil', 'CiPaw.09G123800' => 'cil', 'CiPaw.11G169700' => 'cil', 'CiPaw.12G118300' => 'cil', 'CiPaw.15G071000' => 'cil', 'CiPaw.15G081900' => 'cil', 'ClCG01G024610' => 'cla', 'ClCG03G006070' => 'cla', 'ClCG05G019250' => 'cla', 'ClCG09G009500' => 'cla', 'ClCG11G008200' => 'cla', 'ClCG11G018080' => 'cla', 'COL.COLO4_17373' => 'col', 'COL.COLO4_22994' => 'col', 'COL.COLO4_26389' => 'col', 'COL.COLO4_27170' => 'col', 'COL.COLO4_31074' => 'col', 'COL.COLO4_31465' => 'col', 'COL.COLO4_36438' => 'col', 'COL.COLO4_36439' => 'col', 'Cpa.g.c38781' => 'cpa', 'Cpa.g.sc128.12' => 'cpa', 'Cpa.g.sc166.7' => 'cpa', 'Cpa.g.sc166.8' => 'cpa', 'Cpa.g.sc20.111' => 'cpa', 'Cpa.g.sc27.31' => 'cpa', 'Cpa.g.sc64.36' => 'cpa', 'Cpa.g.sc64.37' => 'cpa', 'Cpa.g.sc66.49' => 'cpa', 'Cpa.g.sc80.64' => 'cpa', 'CsaV3_1G012320' => 'csa', 'CsaV3_2G008480' => 'csa', 'CsaV3_2G033450' => 'csa', 'CsaV3_3G044830' => 'csa', 'CsaV3_4G033710' => 'csa', 'CsaV3_6G051730' => 'csa', 'CsaV3_7G025350' => 'csa', 'CSS0001067' => 'camsi', 'CSS0005996' => 'camsi', 'CSS0006590' => 'camsi', 'CSS0009673' => 'camsi', 'CSS0010201' => 'camsi', 'CSS0010549' => 'camsi', 'CSS0011364' => 'camsi', 'CSS0014473' => 'camsi', 'CSS0014961' => 'camsi', 'CSS0020191' => 'camsi', 'CSS0021165' => 'camsi', 'CSS0022306' => 'camsi', 'CSS0030591' => 'camsi', 'CSS0030696' => 'camsi', 'CSS0032653' => 'camsi', 'CSS0037487' => 'camsi', 'CSS0041102' => 'camsi', 'CSS0041261' => 'camsi', 'CSS0046246' => 'camsi', 'CSS0049256' => 'camsi', 'DCAR_004075' => 'dca', 'DCAR_011538' => 'dca', 'DCAR_019553' => 'dca', 'DCAR_020952' => 'dca', 'DCAR_021739' => 'dca', 'DCAR_027407' => 'dca', 'DCAR_027913' => 'dca', 'DCAR_028066' => 'dca', 'Dinv05899' => 'din', 'Dinv07563' => 'din', 'Dinv08010' => 'din', 'Dinv14125' => 'din', 'Dinv20172' => 'din', 'Dinv30743' => 'din', 'Dinv31229' => 'din', 'Dinv34162' => 'din', 'Dinv36028' => 'din', 'Dinv39368' => 'din', 'Dinv40565' => 'din', 'Dinv41706' => 'din', 'Duzib052G0089' => 'dzi', 'Duzib116G0641' => 'dzi', 'Duzib132G0069' => 'dzi', 'Duzib132G1219' => 'dzi', 'Duzib147G0278' => 'dzi', 'Duzib160G0480' => 'dzi', 'Duzib170G0661' => 'dzi', 'Duzib177G0591' => 'dzi', 'Duzib187G1353' => 'dzi', 'Duzib192G0858' => 'dzi', 'Duzib192G0883' => 'dzi', 'Duzib213G0506' => 'dzi', 'Duzib235G0289' => 'dzi', 'Duzib251G0422' => 'dzi', 'ECA232G3898' => 'eca', 'ECA233G5950' => 'eca', 'ECA234G1699' => 'eca', 'ECA234G2421' => 'eca', 'ECA236G0426' => 'eca', 'ECA236G4331' => 'eca', 'ECA248G2573' => 'eca', 'EL10Ac1g00077' => 'bvu', 'EL10Ac1g01746' => 'bvu', 'EL10Ac2g03464' => 'bvu', 'EL10Ac4g08176' => 'bvu', 'EL10Ac7g17521' => 'bvu', 'EL10Ac8g20386' => 'bvu', 'EL10Ac9g21343' => 'bvu', 'EL10Ac9g22688' => 'bvu', 'Eucgr.B03434' => 'egr', 'Eucgr.D00618' => 'egr', 'Eucgr.E02395' => 'egr', 'Eucgr.F01129' => 'egr', 'Eucgr.F02622' => 'egr', 'Eucgr.F04207' => 'egr', 'FAN01G0570' => 'fan', 'FAN03G3351' => 'fan', 'FAN06G3702' => 'fan', 'FAN07G2149' => 'fan', 'FAN10G3758' => 'fan', 'FAN11G1170' => 'fan', 'FAN11G2050' => 'fan', 'FAN11G2724' => 'fan', 'FAN12G1700' => 'fan', 'FAN12G2028' => 'fan', 'FAN15G1160' => 'fan', 'FAN15G3063' => 'fan', 'FAN16G2540' => 'fan', 'FAN16G3077' => 'fan', 'FAN16G3624' => 'fan', 'FAN17G0221' => 'fan', 'FAN20G2492' => 'fan', 'FAN20G2905' => 'fan', 'FAN21G0548' => 'fan', 'FAN21G1300' => 'fan', 'FAN22G0077' => 'fan', 'FAN22G1315' => 'fan', 'FAN24G1280' => 'fan', 'FAN24G1445' => 'fan', 'FAN24G3527' => 'fan', 'FAN25G0464' => 'fan', 'FAN25G2885' => 'fan', 'FAN25G3270' => 'fan', 'FAN27G1101' => 'fan', 'FAN27G2846' => 'fan', 'FAN27G3524' => 'fan', 'FvH4_2g11770' => 'fve', 'FvH4_2g15630' => 'fve', 'FvH4_3g05570' => 'fve', 'FvH4_3g09110' => 'fve', 'FvH4_3g19940' => 'fve', 'FvH4_4g04821' => 'fve', 'FvH4_4g31480' => 'fve', 'FvH4_7g01740' => 'fve', 'Glyma.05G130400' => 'gma', 'Glyma.05G156400' => 'gma', 'Glyma.07G197000' => 'gma', 'Glyma.08G085151' => 'gma', 'Glyma.08G114500' => 'gma', 'Glyma.08G300400' => 'gma', 'Glyma.10G215800' => 'gma', 'Glyma.12G224400' => 'gma', 'Glyma.13G179300' => 'gma', 'Glyma.13G218151' => 'gma', 'Glyma.13G238800' => 'gma', 'Glyma.13G276900' => 'gma', 'Glyma.14G078200' => 'gma', 'Glyma.15G074500' => 'gma', 'Glyma.15G094100' => 'gma', 'Glyma.17G247200' => 'gma', 'Glyma.18G120100' => 'gma', 'Glyma.20G176000' => 'gma', 'Gohir.A01G063600' => 'ghi', 'Gohir.A01G170301' => 'ghi', 'Gohir.A02G060500' => 'ghi', 'Gohir.A05G133850' => 'ghi', 'Gohir.A05G161400' => 'ghi', 'Gohir.A06G012900' => 'ghi', 'Gohir.A06G035901' => 'ghi', 'Gohir.A06G127100' => 'ghi', 'Gohir.A06G210500' => 'ghi', 'Gohir.A08G008650' => 'ghi', 'Gohir.A09G072700' => 'ghi', 'Gohir.A09G088301' => 'ghi', 'Gohir.A10G040600' => 'ghi', 'Gohir.A12G036300' => 'ghi', 'Gohir.A12G143350' => 'ghi', 'Gohir.A12G165500' => 'ghi', 'Gohir.A13G145700' => 'ghi', 'Gohir.D01G050000' => 'ghi', 'Gohir.D01G051366' => 'ghi', 'Gohir.D01G161350' => 'ghi', 'Gohir.D02G065900' => 'ghi', 'Gohir.D05G164200' => 'ghi', 'Gohir.D05G355500' => 'ghi', 'Gohir.D06G010400' => 'ghi', 'Gohir.D06G111250' => 'ghi', 'Gohir.D06G132000' => 'ghi', 'Gohir.D06G210500' => 'ghi', 'Gohir.D07G165675' => 'ghi', 'Gohir.D08G062240' => 'ghi', 'Gohir.D08G086101' => 'ghi', 'Gohir.D08G138060' => 'ghi', 'Gohir.D09G072300' => 'ghi', 'Gohir.D10G041400' => 'ghi', 'Gohir.D11G191020' => 'ghi', 'Gohir.D11G212066' => 'ghi', 'Gohir.D12G036300' => 'ghi', 'Gohir.D12G168600' => 'ghi', 'Gohir.D13G150600' => 'ghi', 'Gorai.001G057300' => 'gra', 'Gorai.002G069900' => 'gra', 'Gorai.002G200000' => 'gra', 'Gorai.003G067600' => 'gra', 'Gorai.005G074800' => 'gra', 'Gorai.006G087300' => 'gra', 'Gorai.008G037500' => 'gra', 'Gorai.008G181400' => 'gra', 'Gorai.009G169400' => 'gra', 'Gorai.009G387900' => 'gra', 'Gorai.010G013300' => 'gra', 'Gorai.010G153800' => 'gra', 'Gorai.010G255800' => 'gra', 'Gorai.011G043700' => 'gra', 'Gorai.011G198900' => 'gra', 'Gorai.013G168400' => 'gra', 'GSVIVG01005212001' => 'vvi', 'GSVIVG01006163001' => 'vvi', 'GSVIVG01009625001' => 'vvi', 'GSVIVG01014338001' => 'vvi', 'GSVIVG01020005001' => 'vvi', 'GSVIVG01021450001' => 'vvi', 'GSVIVG01023975001' => 'vvi', 'GSVIVG01034490001' => 'vvi', 'HanXRQChr04g0112071' => 'han', 'HanXRQChr05g0131151' => 'han', 'HanXRQChr09g0262371' => 'han', 'HanXRQChr09g0268401' => 'han', 'HanXRQChr10g0279241' => 'han', 'HanXRQChr10g0297961' => 'han', 'HanXRQChr11g0326231' => 'han', 'HanXRQChr11g0328471' => 'han', 'HanXRQChr16g0507941' => 'han', 'HanXRQChr17g0560211' => 'han', 'Haze_02108' => 'cav', 'Haze_02428' => 'cav', 'Haze_05593' => 'cav', 'Haze_06448' => 'cav', 'Haze_09427' => 'cav', 'Haze_12022' => 'cav', 'Haze_17612' => 'cav', 'Haze_17928' => 'cav', 'Hma1.2p1_0032F.1_g019250' => 'hma', 'Hma1.2p1_0163F.1_g072690' => 'hma', 'Hma1.2p1_0265F.1_g106710' => 'hma', 'Hma1.2p1_0286F.1_g113970' => 'hma', 'Hma1.2p1_0363F.1_g136640' => 'hma', 'Hma1.2p1_0584F.1_g183470' => 'hma', 'Hma1.2p1_0885F.1_g232570' => 'hma', 'HPP92_006022' => 'vpl', 'HPP92_007320' => 'vpl', 'HPP92_011521' => 'vpl', 'HPP92_019387' => 'vpl', 'HPP92_024038' => 'vpl', 'Hund05891' => 'sun', 'Hund06450' => 'sun', 'Hund12053' => 'sun', 'Hund16800' => 'sun', 'Hund21222' => 'sun', 'Hund22896' => 'sun', 'Hund23746' => 'sun', 'Hund27083' => 'sun', 'Lalb_Chr02g0141831' => 'lal', 'Lalb_Chr02g0141841' => 'lal', 'Lalb_Chr05g0220411' => 'lal', 'Lalb_Chr06g0162081' => 'lal', 'Lalb_Chr09g0327651' => 'lal', 'Lalb_Chr13g0295051' => 'lal', 'Lalb_Chr15g0086801' => 'lal', 'Lalb_Chr16g0383781' => 'lal', 'Lalb_Chr16g0383791' => 'lal', 'Lalb_Chr18g0055441' => 'lal', 'Lalb_Chr18g0059611' => 'lal', 'Lalb_Chr20g0109661' => 'lal', 'Lalb_Chr20g0109831' => 'lal', 'Lalb_Chr20g0121871' => 'lal', 'Lalb_Chr22g0355361' => 'lal', 'Lalb_Chr25g0286371' => 'lal', 'Lj1A1187G43' => 'lonja', 'Lj1A1205T50' => 'lonja', 'Lj1A800G33' => 'lonja', 'Lj1C1187T7' => 'lonja', 'Lj1C843T11' => 'lonja', 'Lj1g0010940' => 'lja', 'Lj2A288T69' => 'lonja', 'Lj3g0024276' => 'lja', 'Lj4A47T76' => 'lonja', 'Lj4g0005805' => 'lja', 'Lj4g0006097' => 'lja', 'Lj4g0008528' => 'lja', 'Lj4g0024907' => 'lja', 'Lj5g0012472' => 'lja', 'Lj5g0018648' => 'lja', 'Lj6C789G1' => 'lonja', 'Lj6g0004000' => 'lja', 'Lj7A292G67' => 'lonja', 'Lj7A292T64' => 'lonja', 'Lj9A400T58' => 'lonja', 'Lsat_1_v5_gn_1_126181' => 'lsa', 'Lsat_1_v5_gn_4_123041' => 'lsa', 'Lsat_1_v5_gn_4_133620' => 'lsa', 'Lsat_1_v5_gn_4_53221' => 'lsa', 'Lsat_1_v5_gn_4_71961' => 'lsa', 'Lsat_1_v5_gn_7_105241' => 'lsa', 'Lsat_1_v5_gn_7_21361' => 'lsa', 'Lsat_1_v5_gn_7_28860' => 'lsa', 'Lsat_1_v5_gn_7_31260' => 'lsa', 'Lsat_1_v5_gn_8_52801' => 'lsa', 'Manes.02G191400' => 'mes', 'Manes.03G110100' => 'mes', 'Manes.04G071100' => 'mes', 'Manes.05G100500' => 'mes', 'Manes.05G164700' => 'mes', 'Manes.15G087000' => 'mes', 'Manes.15G121500' => 'mes', 'Manes.16G028300' => 'mes', 'Manes.17G046100' => 'mes', 'Manes.17G069800' => 'mes', 'Manes.18G100500' => 'mes', 'Mapoly0002s0109' => 'mpo', 'Mapoly0024s0007' => 'mpo', 'Mapoly0089s0032' => 'mpo', 'MBI04_g42241_MAGBIO' => 'mbi', 'MBI05_g11988_MAGBIO' => 'mbi', 'MBI05_g35452_MAGBIO' => 'mbi', 'MBI07_g30179_MAGBIO' => 'mbi', 'MBI07_g35859_MAGBIO' => 'mbi', 'MBI07_g35860_MAGBIO' => 'mbi', 'MBI07_g37166_MAGBIO' => 'mbi', 'MBI08_g18172_MAGBIO' => 'mbi', 'MBI09_g08441_MAGBIO' => 'mbi', 'MBI13_g01676_MAGBIO' => 'mbi', 'MBI14_g42955_MAGBIO' => 'mbi', 'MBI16_g13161_MAGBIO' => 'mbi', 'MBI17_g27204_MAGBIO' => 'mbi', 'MBI19_g21595_MAGBIO' => 'mbi', 'MD00G1148400' => 'mdo', 'MD02G1301200' => 'mdo', 'MD03G1227800' => 'mdo', 'MD05G1041100' => 'mdo', 'MD05G1124800' => 'mdo', 'MD05G1284000' => 'mdo', 'MD05G1338800' => 'mdo', 'MD05G1338900' => 'mdo', 'MD07G1022800' => 'mdo', 'MD10G1047500' => 'mdo', 'MD10G1127500' => 'mdo', 'MD10G1262300' => 'mdo', 'MD10G1293800' => 'mdo', 'MD16G1074300' => 'mdo', 'Medtr1g021670' => 'mtr', 'Medtr1g096320' => 'mtr', 'Medtr2g013690' => 'mtr', 'Medtr2g019450' => 'mtr', 'Medtr2g085170' => 'mtr', 'Medtr4g088785' => 'mtr', 'Medtr8g055930' => 'mtr', 'Medtr8g085850' => 'mtr', 'MELO3C002605.2' => 'cme', 'MELO3C003891.2' => 'cme', 'MELO3C004012.2' => 'cme', 'MELO3C007134.2' => 'cme', 'MELO3C008118.2' => 'cme', 'MELO3C016700.2' => 'cme', 'MELO3C024127.2' => 'cme', 'MELO3C033361.2' => 'cme', 'MELO3C033362.2' => 'cme', 'Migut.C00430' => 'egut', 'Migut.C01246' => 'egut', 'Migut.E00101' => 'egut', 'Migut.H01486' => 'egut', 'Migut.H01939' => 'egut', 'Migut.K00360' => 'egut', 'Migut.M00910' => 'egut', 'Migut.M01139' => 'egut', 'Migut.N02677' => 'egut', 'MSTRG.13252' => 'ama', 'MSTRG.14701' => 'ama', 'MSTRG.1521' => 'ama', 'MSTRG.15884' => 'ama', 'MSTRG.16242' => 'ama', 'MSTRG.22285' => 'ama', 'MSTRG.22444' => 'ama', 'MSTRG.2349' => 'ama', 'MSTRG.26308' => 'ama', 'MSTRG.28296' => 'ama', 'MSTRG.9895' => 'ama', 'Nitab4.5_0000110g0060' => 'nta', 'Nitab4.5_0000420g0130' => 'nta', 'Nitab4.5_0000422g0030' => 'nta', 'Nitab4.5_0000560g0180' => 'nta', 'Nitab4.5_0000703g0100' => 'nta', 'Nitab4.5_0000786g0200' => 'nta', 'Nitab4.5_0001336g0020' => 'nta', 'Nitab4.5_0001796g0030' => 'nta', 'Nitab4.5_0003348g0060' => 'nta', 'Nitab4.5_0003698g0040' => 'nta', 'Nitab4.5_0003942g0090' => 'nta', 'Nitab4.5_0004775g0070' => 'nta', 'Nitab4.5_0004864g0030' => 'nta', 'Nitab4.5_0005615g0020' => 'nta', 'Nitab4.5_0009288g0030' => 'nta', 'Nitab4.5_0009341g0010' => 'nta', 'Nitab4.5_0009535g0010' => 'nta', 'Nn1g03995' => 'nnu', 'Nn1g04100' => 'nnu', 'Nn1g06530' => 'nnu', 'Nn3g16404' => 'nnu', 'Nn3g17212' => 'nnu', 'Nn3g20776' => 'nnu', 'Nn3g21923' => 'nnu', 'Nn5g27737' => 'nnu', 'Nn5g29461' => 'nnu', 'Nn7g38355' => 'nnu', 'Nn8g39873' => 'nnu', 'Oeu000548.2' => 'oeu', 'Oeu004672.1' => 'oeu', 'Oeu015605.2' => 'oeu', 'Oeu016092.1' => 'oeu', 'Oeu017879.3' => 'oeu', 'Oeu024910.1' => 'oeu', 'Oeu028965.1' => 'oeu', 'Oeu031269.1' => 'oeu', 'Oeu031270.1' => 'oeu', 'Oeu032535.1' => 'oeu', 'Oeu034151.1' => 'oeu', 'Oeu034152.1' => 'oeu', 'Oeu034588.2' => 'oeu', 'Oeu050846.1' => 'oeu', 'Oeu050849.2' => 'oeu', 'Oeu051063.2' => 'oeu', 'Oeu052368.1' => 'oeu', 'Oeu052370.1' => 'oeu', 'Os01g0210400' => 'osa', 'Os01g0304300' => 'osa', 'Os01g0749100' => 'osa', 'Os02g0745800' => 'osa', 'Os03g0769050' => 'osa', 'Os05g0531500' => 'osa', 'Os06g0724300' => 'osa', 'Os11g0198100' => 'osa', 'Peaxi162Scf00069g01425' => 'pax', 'Peaxi162Scf00280g00811' => 'pax', 'Peaxi162Scf00310g00615' => 'pax', 'Peaxi162Scf00362g00542' => 'pax', 'Peaxi162Scf00461g00310' => 'pax', 'Peaxi162Scf00530g00118' => 'pax', 'Peaxi162Scf00541g00057' => 'pax', 'Peaxi162Scf00661g00017' => 'pax', 'Peaxi162Scf00926g00027' => 'pax', 'Peaxi162Scf01064g00263' => 'pax', 'Peaxi162Scf01211g00135' => 'pax', 'PGR004G2336' => 'pgr', 'PGR042G0327' => 'pgr', 'PGR042G1957' => 'pgr', 'PGR042G2003' => 'pgr', 'PGR042G3929' => 'pgr', 'PGR083G1137' => 'pgr', 'PGR083G1364' => 'pgr', 'PGSC0003DMG400003381' => 'stu', 'PGSC0003DMG400003417' => 'stu', 'PGSC0003DMG400008981' => 'stu', 'PGSC0003DMG400012417' => 'stu', 'PGSC0003DMG400012823' => 'stu', 'PGSC0003DMG400016885' => 'stu', 'PGSC0003DMG400022812' => 'stu', 'PGSC0003DMG400029726' => 'stu', 'PGSC0003DMG401009243' => 'stu', 'PGSC0003DMG401031505' => 'stu', 'PGSC0003DMG402031505' => 'stu', 'Phvul.001G017600' => 'pvu', 'Phvul.002G193500' => 'pvu', 'Phvul.002G228900' => 'pvu', 'Phvul.002G236800' => 'pvu', 'Phvul.003G049500' => 'pvu', 'Phvul.005G072000' => 'pvu', 'Phvul.006G164800' => 'pvu', 'Phvul.006G185100' => 'pvu', 'Phvul.007G090000' => 'pvu', 'Potri.001G399800' => 'ptr', 'Potri.002G149900' => 'ptr', 'Potri.004G044100' => 'ptr', 'Potri.004G177600' => 'ptr', 'Potri.009G138000' => 'ptr', 'Potri.010G094000' => 'ptr', 'Potri.011G053000' => 'ptr', 'Potri.011G119300' => 'ptr', 'Potri.013G113700' => 'ptr', 'Potri.018G107800' => 'ptr', 'Potri.019G084100' => 'ptr', 'Pp3c14_23720' => 'ppa', 'Pp3c16_6340' => 'ppa', 'Pp3c23_13420' => 'ppa', 'Pp3c24_2740' => 'ppa', 'Pp3c25_860' => 'ppa', 'Pp3c8_21750' => 'ppa', 'Prupe.1G273000' => 'ppe', 'Prupe.1G273700' => 'ppe', 'Prupe.1G274100' => 'ppe', 'Prupe.2G023300' => 'ppe', 'Prupe.4G048000' => 'ppe', 'Prupe.4G080400' => 'ppe', 'Prupe.4G181200' => 'ppe', 'Prupe.8G056900' => 'ppe', 'Prupe.8G168700' => 'ppe', 'Psat1g189080' => 'psa', 'Psat1g204760' => 'psa', 'Psat4g175560' => 'psa', 'Psat4g177720' => 'psa', 'Psat5g244240' => 'psa', 'Psat6g010720' => 'psa', 'Psat6g187200' => 'psa', 'Psat7g072040' => 'psa', 'PSO017G3501' => 'pso', 'PSO063G2148' => 'pso', 'PSO063G5608' => 'pso', 'PSO210G6392' => 'pso', 'PSO541G2319' => 'pso', 'PSO541G2836' => 'pso', 'PSO541G4012' => 'pso', 'PSO541G6253' => 'pso', 'PSO675G0580' => 'pso', 'PSO675G0856' => 'pso', 'PSO675G5635' => 'pso', 'PSO675G9157' => 'pso', 'PSO832G1660' => 'pso', 'PSO832G1969' => 'pso', 'QL02p007186' => 'qlo', 'QL02p033904' => 'qlo', 'QL03p064391' => 'qlo', 'QL05p040593' => 'qlo', 'QL05p058242' => 'qlo', 'QL08p021825' => 'qlo', 'QL11p004981' => 'qlo', 'RcHm_v2.0_Chr1g0318301' => 'rch', 'RcHm_v2.0_Chr4g0418501' => 'rch', 'RcHm_v2.0_Chr4g0439971' => 'rch', 'RcHm_v2.0_Chr5g0008541' => 'rch', 'RcHm_v2.0_Chr5g0014101' => 'rch', 'RcHm_v2.0_Chr5g0014131' => 'rch', 'RcHm_v2.0_Chr5g0033621' => 'rch', 'RcHm_v2.0_Chr6g0272041' => 'rch', 'RcHm_v2.0_Chr6g0278831' => 'rch', 'Rhsim02G0130400' => 'rsi', 'Rhsim02G0171100' => 'rsi', 'Rhsim05G0053000' => 'rsi', 'Rhsim05G0053100' => 'rsi', 'Rhsim06G0096500' => 'rsi', 'Rhsim06G0096600' => 'rsi', 'Rhsim06G0199100' => 'rsi', 'Rhsim12G0062300' => 'rsi', 'Rhsim12G0062800' => 'rsi', 'Sabra02G0118600' => 'sbr', 'Sabra04G0027300' => 'sbr', 'Sabra04G0119500' => 'sbr', 'Sabra08G0112500' => 'sbr', 'Sabra11G0036800' => 'sbr', 'Sabra11G0103800' => 'sbr', 'Sabra13G0096300' => 'sbr', 'Sabra16G0262300' => 'sbr', 'Sabra18G0091700' => 'sbr', 'Sabra19G0095400' => 'sbr', 'SalBow6G3080' => 'sbo', 'SalBow7G1157' => 'sbo', 'SalBow7G2123' => 'sbo', 'SalBow7G2285' => 'sbo', 'SalBow7G3537' => 'sbo', 'SalBow8G2947' => 'sbo', 'SalBow8G4463' => 'sbo', 'SalBow8G5466' => 'sbo', 'Sc01g0001750' => 'sci', 'Sc02g0006640' => 'sci', 'Sc02g0006670' => 'sci', 'Sc04g0008220' => 'sci', 'Sc05g0006190' => 'sci', 'Sc08g0002760' => 'sci', 'Sc17g0006170' => 'sci', 'Sc22g0002050' => 'sci', 'Sc23g0001190' => 'sci', 'Sc24g0000980' => 'sci', 'Sed0006245' => 'sed', 'Sed0007543' => 'sed', 'Sed0009411' => 'sed', 'Sed0010765' => 'sed', 'Sed0012944' => 'sed', 'Sed0014682' => 'sed', 'Sed0016174' => 'sed', 'Sed0016796' => 'sed', 'Sed0020317' => 'sed', 'Sed0021467' => 'sed', 'SEGI_01316' => 'sgi', 'SEGI_03374' => 'sgi', 'SEGI_16265' => 'sgi', 'SEGI_18569' => 'sgi', 'SEGI_20351' => 'sgi', 'SEGI_26395' => 'sgi', 'SEGI_29469' => 'sgi', 'SEGI_34771' => 'sgi', 'SEGI_36769' => 'sgi', 'SEGI_37139' => 'sgi', 'SGA_v2.0_scaffold100G29687' => 'sas', 'SGA_v2.0_scaffold118G32472' => 'sas', 'SGA_v2.0_scaffold14G07051' => 'sas', 'SGA_v2.0_scaffold183G39845' => 'sas', 'SGA_v2.0_scaffold1G00174' => 'sas', 'SGA_v2.0_scaffold22G09714' => 'sas', 'SGA_v2.0_scaffold333G48992' => 'sas', 'SGA_v2.0_scaffold46G17491' => 'sas', 'SGA_v2.0_scaffold49G18294' => 'sas', 'SGA_v2.0_scaffold63G21658' => 'sas', 'SHI01741' => 'shi', 'SHI05771' => 'shi', 'SHI18077' => 'shi', 'SHI20525' => 'shi', 'SHI20527' => 'shi', 'SHI20528' => 'shi', 'SMO172G0185' => 'smo', 'SMO198G0020' => 'smo', 'SMO351G0006' => 'smo', 'SMO356G0118' => 'smo', 'SMO358G0296' => 'smo', 'SMO367G0079' => 'smo', 'SMO367G1277' => 'smo', 'Solyc01g014220.3' => 'sly', 'Solyc01g111770.2' => 'sly', 'Solyc02g078180.3' => 'sly', 'Solyc03g006430.3' => 'sly', 'Solyc03g006456.1' => 'sly', 'Solyc03g079860.2' => 'sly', 'Solyc04g079770.3' => 'sly', 'Solyc05g007430.4' => 'sly', 'Solyc07g063150.3' => 'sly', 'Solyc08g016620.3' => 'sly', 'Solyc09g057590.3' => 'sly', 'Solyc09g057600.1' => 'sly', 'Solyc10g009050.3' => 'sly', 'Solyc11g017420.2' => 'sly', 'Sopen01g053810' => 'spe', 'Sopen02g023040' => 'spe', 'Sopen03g002440' => 'spe', 'Sopen04g033350' => 'spe', 'Sopen05g003310' => 'spe', 'Sopen07g004050' => 'spe', 'Sopen07g031340' => 'spe', 'Sopen08g006990' => 'spe', 'Sopen10g004830' => 'spe', 'Sopen11g009370' => 'spe', 'Sp1g24450' => 'spa', 'Sp1g29670' => 'spa', 'Sp1g39600' => 'spa', 'Sp2g11080' => 'spa', 'Sp2g13970' => 'spa', 'Sp4g16130' => 'spa', 'Sp6g13080' => 'spa', 'Sp7g37270' => 'spa', 'TAR371G0065' => 'tar', 'TAR376G0340' => 'tar', 'TAR376G0435' => 'tar', 'TAR381G0002' => 'tar', 'TAR381G1236' => 'tar', 'TAR624G0055' => 'tar', 'TAR624G0324' => 'tar', 'TAR624G0696' => 'tar', 'TAR624G0906' => 'tar', 'TAR625G0107' => 'tar', 'TAR626G0015' => 'tar', 'TAR626G1356' => 'tar', 'TAR627G0888' => 'tar', 'TAR628G0399' => 'tar', 'TAR628G1327' => 'tar', 'TAR629G2831' => 'tar', 'TAR629G2874' => 'tar', 'TAR633G1432' => 'tar', 'TAR633G2771' => 'tar', 'THA.LOC104803394' => 'tha', 'THA.LOC104805153' => 'tha', 'THA.LOC104806784' => 'tha', 'THA.LOC104810473' => 'tha', 'THA.LOC104813100' => 'tha', 'THA.LOC104814215' => 'tha', 'THA.LOC104815554' => 'tha', 'THA.LOC104820544' => 'tha', 'THA.LOC104824754' => 'tha', 'THA.LOC104827717' => 'tha', 'Thecc.02G031400' => 'tca', 'Thecc.02G055900' => 'tca', 'Thecc.02G350800' => 'tca', 'Thecc.06G150900' => 'tca', 'Thecc.06G186600' => 'tca', 'Thecc.07G089600' => 'tca', 'Thecc.08G020400' => 'tca', 'Thecc.08G182100' => 'tca', 'Thhalv10000873m.g' => 'esa', 'Thhalv10004185m.g' => 'esa', 'Thhalv10006981m.g' => 'esa', 'Thhalv10007204m.g' => 'esa', 'Thhalv10011374m.g' => 'esa', 'Thhalv10013482m.g' => 'esa', 'Thhalv10017801m.g' => 'esa', 'Thhalv10024983m.g' => 'esa', 'TPR.G12072' => 'tpr', 'TPR.G15769' => 'tpr', 'TPR.G16504' => 'tpr', 'TPR.G16506' => 'tpr', 'TPR.G24345' => 'tpr', 'TPR.G26666' => 'tpr', 'TPR.G27320' => 'tpr', 'TPR.G31819' => 'tpr', 'TPR.G38879' => 'tpr', 'TPR.G39015' => 'tpr', 'TPR.G8819' => 'tpr', 'TWI09G0924' => 'twi', 'TWI12G0811' => 'twi', 'TWI12G1294' => 'twi', 'TWI31G0150' => 'twi', 'TWI36G1262' => 'twi', 'TWI38G1287' => 'twi', 'TWI38G1633' => 'twi', 'TWI38G1982' => 'twi', 'TWI39G0116' => 'twi', 'TWI60G1011' => 'twi', 'TWI63G0171' => 'twi', 'TWI73G0839' => 'twi', 'TWI79G1511' => 'twi', 'unitig_0.g915' => 'ugi', 'unitig_0.g916' => 'ugi', 'unitig_21.g20219' => 'ugi', 'unitig_21.g20416' => 'ugi', 'unitig_578.g16132' => 'ugi', 'unitig_578.g16718' => 'ugi', 'unitig_62.g23481' => 'ugi', 'unitig_744.g24535' => 'ugi', 'unitig_749.g13525' => 'ugi', 'vmacro01248' => 'vma', 'vmacro02290' => 'vma', 'vmacro10946' => 'vma', 'vmacro11865' => 'vma', 'vmacro12493' => 'vma', 'vmacro17322' => 'vma', 'vmacro21599' => 'vma', 'vmacro23041' => 'vma', 'VMungo0251G0004' => 'vmu', 'VMungo0251G2639' => 'vmu', 'VMungo0251G2967' => 'vmu', 'VMungo0540G0864' => 'vmu', 'VMungo0540G1569' => 'vmu', 'VMungo0647G0317' => 'vmu', 'VMungo0720G1373' => 'vmu', 'VMungo0720G1508' => 'vmu', 'VMungo1080G0485' => 'vmu', 'VMungo1215G3177' => 'vmu', 'Zm00001eb112600' => 'zma', 'Zm00001eb120220' => 'zma', 'Zm00001eb153240' => 'zma', 'Zm00001eb168880' => 'zma', 'Zm00001eb213920' => 'zma', 'Zm00001eb228280' => 'zma', 'Zm00001eb254580' => 'zma', 'Zm00001eb272180' => 'zma', 'Zm00001eb293190' => 'zma', 'Zm00001eb322930' => 'zma', 'Zm00001eb353360' => 'zma', 'Zm00001eb353390' => 'zma', 'Zm00001eb353430' => 'zma', 'Zm00001eb353440' => 'zma', 'Zm00001eb353780' => 'zma' ), 'gf_id' => 'HOM05D000499', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000499' ), 'data_identifier' => 'HOM05D000499', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000499', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1066', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p29780' => 'bna', 'A02p33180' => 'bna', 'A03p16470' => 'bna', 'A03p66010' => 'bna', 'A04p25970' => 'bna', 'A06p01270' => 'bna', 'A06p46080' => 'bna', 'A07p11400' => 'bna', 'A08p01840' => 'bna', 'A08p08230' => 'bna', 'A08p25740' => 'bna', 'A09p32070' => 'bna', 'A09p37830' => 'bna', 'A09p42840' => 'bna', 'A09p42850' => 'bna', 'Aa31LG10G2060' => 'aar', 'Aa31LG2G7410' => 'aar', 'Aa31LG6G10200' => 'aar', 'Aa31LG6G16680' => 'aar', 'Aa31LG6G8470' => 'aar', 'Aa31LG9G12730' => 'aar', 'Aa31LG9G13680' => 'aar', 'Aa31LG9G14920' => 'aar', 'Aa31LG9G6650' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4977' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5467' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3254' => 'aag', 'Actinidia02578' => 'ach', 'Actinidia07693' => 'ach', 'Actinidia08413' => 'ach', 'Actinidia08414' => 'ach', 'Actinidia15289' => 'ach', 'Actinidia19871' => 'ach', 'Actinidia21475' => 'ach', 'Actinidia22576' => 'ach', 'Actinidia28327' => 'ach', 'Actinidia32491' => 'ach', 'Actinidia39463' => 'ach', 'Actinidia39571' => 'ach', 'Ah.01g013750' => 'amhyb', 'Ah.01g023210' => 'amhyb', 'Ah.04g164850' => 'amhyb', 'Ah.05g178060' => 'amhyb', 'Ah.07g204270' => 'amhyb', 'Ah.07g208480' => 'amhyb', 'Ah.09g237410' => 'amhyb', 'Ah.14g089460' => 'amhyb', 'AL1G41790' => 'aly', 'AL1G49050' => 'aly', 'AL1G53810' => 'aly', 'AL1G61400' => 'aly', 'AL4G18580' => 'aly', 'AL5G12510' => 'aly', 'AL5G12540' => 'aly', 'AL6G43230' => 'aly', 'AL7G10370' => 'aly', 'AL7G19250' => 'aly', 'AL8G12240' => 'aly', 'AL8G18540' => 'aly', 'Aqoxy1G02409' => 'aox', 'Aqoxy2G03993' => 'aox', 'Aqoxy3G03357' => 'aox', 'Aqoxy4G00785' => 'aox', 'Aqoxy5G02598' => 'aox', 'Aqoxy6G00132' => 'aox', 'Aqoxy7G01776' => 'aox', 'Aqoxy7G02316' => 'aox', 'Aqoxy7G03973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.12AFKW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B8730' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27IQR1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3F75VG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3RE0GA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41TCQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.527VTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FIR39' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5W8UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DA38EV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ63HS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H1I32C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HC27T5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4M8AP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7N3CZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9UVDZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LS1NQA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT1D4B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SKC4TM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCFV76' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF9Q1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQWD9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1ZM88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WE07RT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YCK7VH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJE6Q6' => 'arhy', 'AT1G28240' => 'ath', 'AT1G34550' => 'ath', 'AT1G53040' => 'ath', 'AT2G02910' => 'ath', 'AT4G09630' => 'ath', 'AT4G38500' => 'ath', 'AT5G42660' => 'ath', 'AT5G46220' => 'ath', 'ATR0152G026' => 'atr', 'ATR0564G343' => 'atr', 'ATR0706G151' => 'atr', 'ATR0733G207' => 'atr', 'ATR0751G234' => 'atr', 'ATR0807G048' => 'atr', 'ATR1091G084' => 'atr', 'Atru.chr10.1229' => 'acertr', 'Atru.chr10.1230' => 'acertr', 'Atru.chr10.1874' => 'acertr', 'Atru.chr11.1808' => 'acertr', 'Atru.chr13.1795' => 'acertr', 'Atru.chr13.570' => 'acertr', 'Atru.chr2.2608' => 'acertr', 'Atru.chr2.2609' => 'acertr', 'Atru.chr5.3428' => 'acertr', 'Atru.chr8.1171' => 'acertr', 'AUR62004651' => 'cqu', 'AUR62008675' => 'cqu', 'AUR62010014' => 'cqu', 'AUR62013004' => 'cqu', 'AUR62014825' => 'cqu', 'AUR62015015' => 'cqu', 'AUR62015151' => 'cqu', 'AUR62017020' => 'cqu', 'AUR62019422' => 'cqu', 'AUR62023570' => 'cqu', 'AUR62025571' => 'cqu', 'AUR62029098' => 'cqu', 'AUR62033863' => 'cqu', 'AUR62034296' => 'cqu', 'AUR62040075' => 'cqu', 'BcaB02g07334' => 'bca', 'BcaB02g10575' => 'bca', 'BcaB03g12119' => 'bca', 'BcaB03g12120' => 'bca', 'BcaB03g13945' => 'bca', 'BcaB04g17123' => 'bca', 'BcaB04g17867' => 'bca', 'BcaB04g19839' => 'bca', 'BcaB07g30317' => 'bca', 'BcaB07g32432' => 'bca', 'BcaB07g33362' => 'bca', 'BcaB08g36611' => 'bca', 'BcaC01g00028' => 'bca', 'BcaC01g01356' => 'bca', 'BcaC01g02034' => 'bca', 'BcaC01g06051' => 'bca', 'BcaC03g16839' => 'bca', 'BcaC03g17176' => 'bca', 'BcaC05g26829' => 'bca', 'BcaC06g31490' => 'bca', 'BcaC06g35344' => 'bca', 'BcaC06g36570' => 'bca', 'BcaC07g37537' => 'bca', 'BcaC08g43491' => 'bca', 'BcaC08g43773' => 'bca', 'BcaNung00234' => 'bca', 'BcaNung01982' => 'bca', 'BcaNung03707' => 'bca', 'BcaNung06454' => 'bca', 'BolC2t10762H' => 'bol', 'BolC2t11191H' => 'bol', 'BolC3t14322H' => 'bol', 'BolC3t19747H' => 'bol', 'BolC3t21425H' => 'bol', 'BolC4t27800H' => 'bol', 'BolC5t31423H' => 'bol', 'BolC6t35951H' => 'bol', 'BolC6t36282H' => 'bol', 'BolC7t40678H' => 'bol', 'BolC7t40679H' => 'bol', 'BolC7t42222H' => 'bol', 'BolC7t43492H' => 'bol', 'BolC7t46785H' => 'bol', 'BolC8t47853H' => 'bol', 'BolC9t56805H' => 'bol', 'BraA02t08000Z' => 'bra', 'BraA02t08341Z' => 'bra', 'BraA03t10936Z' => 'bra', 'BraA03t15657Z' => 'bra', 'BraA04t18100Z' => 'bra', 'BraA05t20523Z' => 'bra', 'BraA06t23353Z' => 'bra', 'BraA06t27473Z' => 'bra', 'BraA06t27769Z' => 'bra', 'BraA07t28928Z' => 'bra', 'BraA08t32236Z' => 'bra', 'BraA08t32841Z' => 'bra', 'BraA08t34524Z' => 'bra', 'BraA09t38742Z' => 'bra', 'BraA09t39295Z' => 'bra', 'C02p47180' => 'bna', 'C02p50990' => 'bna', 'C03p19360' => 'bna', 'C03p74950' => 'bna', 'C03p91000' => 'bna', 'C04p63260' => 'bna', 'C05p27050' => 'bna', 'C06p08750' => 'bna', 'C06p11490' => 'bna', 'C07p02820' => 'bna', 'C07p17180' => 'bna', 'C07p29440' => 'bna', 'C07p63730' => 'bna', 'C09p39260' => 'bna', 'CAN.G1164.34' => 'can', 'CAN.G1164.39' => 'can', 'CAN.G1530.3' => 'can', 'CAN.G162.61' => 'can', 'CAN.G176.6' => 'can', 'CAN.G289.49' => 'can', 'CAN.G370.21' => 'can', 'CAN.G370.22' => 'can', 'CAN.G371.117' => 'can', 'CAN.G58.37' => 'can', 'CAN.G588.98' => 'can', 'CANSAT21G2266' => 'cansat', 'CANSAT25G2799' => 'cansat', 'CANSAT35G0862' => 'cansat', 'CANSAT35G1704' => 'cansat', 'CANSAT35G1760' => 'cansat', 'CANSAT56G3971' => 'cansat', 'CANSAT56G4116' => 'cansat', 'CANSAT80G1259' => 'cansat', 'CARHR027730' => 'chi', 'CARHR033880' => 'chi', 'CARHR043270' => 'chi', 'CARHR145330' => 'chi', 'CARHR145340' => 'chi', 'CARHR175570' => 'chi', 'CARHR181570' => 'chi', 'CARHR258470' => 'chi', 'CARHR260490' => 'chi', 'CARHR294220' => 'chi', 'Carub.0001s2668' => 'cru', 'Carub.0001s3257' => 'cru', 'Carub.0001s4220' => 'cru', 'Carub.0005s0179' => 'cru', 'Carub.0006s2807' => 'cru', 'Carub.0007s0039' => 'cru', 'Carub.0008s0169' => 'cru', 'Carub.0008s0636' => 'cru', 'Ca_00338_v3' => 'car', 'Ca_00542_v3' => 'car', 'Ca_01844_v3' => 'car', 'Ca_10611_v3' => 'car', 'Ca_13326_v3' => 'car', 'Ca_17944_v3' => 'car', 'Ca_18546_v3' => 'car', 'Ca_24219_v3' => 'car', 'Ca_29972_v3' => 'car', 'CBR_g3681' => 'cbr', 'CBR_g40021' => 'cbr', 'Cc01_g08140' => 'ccan', 'Cc02_g13410' => 'ccan', 'Cc02_g37480' => 'ccan', 'Cc05_g12030' => 'ccan', 'Cc09_g03370' => 'ccan', 'Cc09_g10300' => 'ccan', 'Cc10_g03530' => 'ccan', 'Cc10_g11380' => 'ccan', 'CDE01G0176' => 'cde', 'CDE02G0675' => 'cde', 'CDE02G0942' => 'cde', 'CDE02G1153' => 'cde', 'CDE02G4177' => 'cde', 'CDE04G2117' => 'cde', 'CDE04G2736' => 'cde', 'CDE08G1161' => 'cde', 'CDE09G1238' => 'cde', 'Cfa000467' => 'cfa', 'Cfa000947' => 'cfa', 'Cfa004969' => 'cfa', 'Cfa005284' => 'cfa', 'Cfa008993' => 'cfa', 'Cfa018187' => 'cfa', 'Cfa018454' => 'cfa', 'Cfa020585' => 'cfa', 'Ciclev10000424m.g' => 'ccl', 'Ciclev10003605m.g' => 'ccl', 'Ciclev10007828m.g' => 'ccl', 'Ciclev10014620m.g' => 'ccl', 'Ciclev10015169m.g' => 'ccl', 'Ciclev10018291m.g' => 'ccl', 'Ciclev10028256m.g' => 'ccl', 'Ciclev10033822m.g' => 'ccl', 'CiPaw.05G060300' => 'cil', 'CiPaw.05G085000' => 'cil', 'CiPaw.06G083700' => 'cil', 'CiPaw.06G120300' => 'cil', 'CiPaw.09G060500' => 'cil', 'CiPaw.09G123800' => 'cil', 'CiPaw.11G169700' => 'cil', 'CiPaw.12G118300' => 'cil', 'CiPaw.15G071000' => 'cil', 'CiPaw.15G081900' => 'cil', 'ClCG01G024610' => 'cla', 'ClCG03G006070' => 'cla', 'ClCG05G019250' => 'cla', 'ClCG09G009500' => 'cla', 'ClCG11G008200' => 'cla', 'ClCG11G018080' => 'cla', 'COL.COLO4_17373' => 'col', 'COL.COLO4_22994' => 'col', 'COL.COLO4_26389' => 'col', 'COL.COLO4_27170' => 'col', 'COL.COLO4_31074' => 'col', 'COL.COLO4_31465' => 'col', 'COL.COLO4_36438' => 'col', 'COL.COLO4_36439' => 'col', 'Cpa.g.c38781' => 'cpa', 'Cpa.g.sc128.12' => 'cpa', 'Cpa.g.sc166.7' => 'cpa', 'Cpa.g.sc166.8' => 'cpa', 'Cpa.g.sc20.111' => 'cpa', 'Cpa.g.sc27.31' => 'cpa', 'Cpa.g.sc64.36' => 'cpa', 'Cpa.g.sc64.37' => 'cpa', 'Cpa.g.sc66.49' => 'cpa', 'Cpa.g.sc80.64' => 'cpa', 'CsaV3_1G012320' => 'csa', 'CsaV3_2G008480' => 'csa', 'CsaV3_2G033450' => 'csa', 'CsaV3_3G044830' => 'csa', 'CsaV3_4G033710' => 'csa', 'CsaV3_6G051730' => 'csa', 'CsaV3_7G025350' => 'csa', 'CSS0001067' => 'camsi', 'CSS0005996' => 'camsi', 'CSS0006590' => 'camsi', 'CSS0009673' => 'camsi', 'CSS0010201' => 'camsi', 'CSS0010549' => 'camsi', 'CSS0011364' => 'camsi', 'CSS0014473' => 'camsi', 'CSS0014961' => 'camsi', 'CSS0020191' => 'camsi', 'CSS0021165' => 'camsi', 'CSS0022306' => 'camsi', 'CSS0030591' => 'camsi', 'CSS0030696' => 'camsi', 'CSS0032653' => 'camsi', 'CSS0037487' => 'camsi', 'CSS0041102' => 'camsi', 'CSS0041261' => 'camsi', 'CSS0046246' => 'camsi', 'CSS0049256' => 'camsi', 'DCAR_004075' => 'dca', 'DCAR_011538' => 'dca', 'DCAR_019553' => 'dca', 'DCAR_020952' => 'dca', 'DCAR_021739' => 'dca', 'DCAR_027407' => 'dca', 'DCAR_027913' => 'dca', 'DCAR_028066' => 'dca', 'Dinv05899' => 'din', 'Dinv07563' => 'din', 'Dinv08010' => 'din', 'Dinv14125' => 'din', 'Dinv20172' => 'din', 'Dinv30743' => 'din', 'Dinv31229' => 'din', 'Dinv34162' => 'din', 'Dinv36028' => 'din', 'Dinv39368' => 'din', 'Dinv40565' => 'din', 'Dinv41706' => 'din', 'Duzib052G0089' => 'dzi', 'Duzib116G0641' => 'dzi', 'Duzib132G0069' => 'dzi', 'Duzib132G1219' => 'dzi', 'Duzib147G0278' => 'dzi', 'Duzib160G0480' => 'dzi', 'Duzib170G0661' => 'dzi', 'Duzib177G0591' => 'dzi', 'Duzib187G1353' => 'dzi', 'Duzib192G0858' => 'dzi', 'Duzib192G0883' => 'dzi', 'Duzib213G0506' => 'dzi', 'Duzib235G0289' => 'dzi', 'Duzib251G0422' => 'dzi', 'ECA232G3898' => 'eca', 'ECA233G5950' => 'eca', 'ECA234G1699' => 'eca', 'ECA234G2421' => 'eca', 'ECA236G0426' => 'eca', 'ECA236G4331' => 'eca', 'ECA248G2573' => 'eca', 'EL10Ac1g00077' => 'bvu', 'EL10Ac1g01746' => 'bvu', 'EL10Ac2g03464' => 'bvu', 'EL10Ac4g08176' => 'bvu', 'EL10Ac7g17521' => 'bvu', 'EL10Ac8g20386' => 'bvu', 'EL10Ac9g21343' => 'bvu', 'EL10Ac9g22688' => 'bvu', 'Eucgr.B03434' => 'egr', 'Eucgr.D00618' => 'egr', 'Eucgr.E02395' => 'egr', 'Eucgr.F01129' => 'egr', 'Eucgr.F02622' => 'egr', 'Eucgr.F04207' => 'egr', 'FAN01G0570' => 'fan', 'FAN03G3351' => 'fan', 'FAN06G3702' => 'fan', 'FAN07G2149' => 'fan', 'FAN10G3758' => 'fan', 'FAN11G1170' => 'fan', 'FAN11G2050' => 'fan', 'FAN11G2724' => 'fan', 'FAN12G1700' => 'fan', 'FAN12G2028' => 'fan', 'FAN15G1160' => 'fan', 'FAN15G3063' => 'fan', 'FAN16G2540' => 'fan', 'FAN16G3077' => 'fan', 'FAN16G3624' => 'fan', 'FAN17G0221' => 'fan', 'FAN20G2492' => 'fan', 'FAN20G2905' => 'fan', 'FAN21G0548' => 'fan', 'FAN21G1300' => 'fan', 'FAN22G0077' => 'fan', 'FAN22G1315' => 'fan', 'FAN24G1280' => 'fan', 'FAN24G1445' => 'fan', 'FAN24G3527' => 'fan', 'FAN25G0464' => 'fan', 'FAN25G2885' => 'fan', 'FAN25G3270' => 'fan', 'FAN27G1101' => 'fan', 'FAN27G2846' => 'fan', 'FAN27G3524' => 'fan', 'FvH4_2g11770' => 'fve', 'FvH4_2g15630' => 'fve', 'FvH4_3g05570' => 'fve', 'FvH4_3g09110' => 'fve', 'FvH4_3g19940' => 'fve', 'FvH4_4g04821' => 'fve', 'FvH4_4g31480' => 'fve', 'FvH4_7g01740' => 'fve', 'Glyma.05G130400' => 'gma', 'Glyma.05G156400' => 'gma', 'Glyma.07G197000' => 'gma', 'Glyma.08G085151' => 'gma', 'Glyma.08G114500' => 'gma', 'Glyma.08G300400' => 'gma', 'Glyma.10G215800' => 'gma', 'Glyma.12G224400' => 'gma', 'Glyma.13G179300' => 'gma', 'Glyma.13G218151' => 'gma', 'Glyma.13G238800' => 'gma', 'Glyma.13G276900' => 'gma', 'Glyma.14G078200' => 'gma', 'Glyma.15G074500' => 'gma', 'Glyma.15G094100' => 'gma', 'Glyma.17G247200' => 'gma', 'Glyma.18G120100' => 'gma', 'Glyma.20G176000' => 'gma', 'Gohir.A01G063600' => 'ghi', 'Gohir.A01G170301' => 'ghi', 'Gohir.A02G060500' => 'ghi', 'Gohir.A05G133850' => 'ghi', 'Gohir.A05G161400' => 'ghi', 'Gohir.A06G012900' => 'ghi', 'Gohir.A06G035901' => 'ghi', 'Gohir.A06G127100' => 'ghi', 'Gohir.A06G210500' => 'ghi', 'Gohir.A08G008650' => 'ghi', 'Gohir.A09G072700' => 'ghi', 'Gohir.A09G088301' => 'ghi', 'Gohir.A10G040600' => 'ghi', 'Gohir.A12G036300' => 'ghi', 'Gohir.A12G143350' => 'ghi', 'Gohir.A12G165500' => 'ghi', 'Gohir.A13G145700' => 'ghi', 'Gohir.D01G050000' => 'ghi', 'Gohir.D01G051366' => 'ghi', 'Gohir.D01G161350' => 'ghi', 'Gohir.D02G065900' => 'ghi', 'Gohir.D05G164200' => 'ghi', 'Gohir.D05G355500' => 'ghi', 'Gohir.D06G010400' => 'ghi', 'Gohir.D06G111250' => 'ghi', 'Gohir.D06G132000' => 'ghi', 'Gohir.D06G210500' => 'ghi', 'Gohir.D07G165675' => 'ghi', 'Gohir.D08G062240' => 'ghi', 'Gohir.D08G086101' => 'ghi', 'Gohir.D08G138060' => 'ghi', 'Gohir.D09G072300' => 'ghi', 'Gohir.D10G041400' => 'ghi', 'Gohir.D11G191020' => 'ghi', 'Gohir.D11G212066' => 'ghi', 'Gohir.D12G036300' => 'ghi', 'Gohir.D12G168600' => 'ghi', 'Gohir.D13G150600' => 'ghi', 'Gorai.001G057300' => 'gra', 'Gorai.002G069900' => 'gra', 'Gorai.002G200000' => 'gra', 'Gorai.003G067600' => 'gra', 'Gorai.005G074800' => 'gra', 'Gorai.006G087300' => 'gra', 'Gorai.008G037500' => 'gra', 'Gorai.008G181400' => 'gra', 'Gorai.009G169400' => 'gra', 'Gorai.009G387900' => 'gra', 'Gorai.010G013300' => 'gra', 'Gorai.010G153800' => 'gra', 'Gorai.010G255800' => 'gra', 'Gorai.011G043700' => 'gra', 'Gorai.011G198900' => 'gra', 'Gorai.013G168400' => 'gra', 'GSVIVG01005212001' => 'vvi', 'GSVIVG01006163001' => 'vvi', 'GSVIVG01009625001' => 'vvi', 'GSVIVG01014338001' => 'vvi', 'GSVIVG01020005001' => 'vvi', 'GSVIVG01021450001' => 'vvi', 'GSVIVG01023975001' => 'vvi', 'GSVIVG01034490001' => 'vvi', 'HanXRQChr04g0112071' => 'han', 'HanXRQChr05g0131151' => 'han', 'HanXRQChr09g0262371' => 'han', 'HanXRQChr09g0268401' => 'han', 'HanXRQChr10g0279241' => 'han', 'HanXRQChr10g0297961' => 'han', 'HanXRQChr11g0326231' => 'han', 'HanXRQChr11g0328471' => 'han', 'HanXRQChr16g0507941' => 'han', 'HanXRQChr17g0560211' => 'han', 'Haze_02108' => 'cav', 'Haze_02428' => 'cav', 'Haze_05593' => 'cav', 'Haze_06448' => 'cav', 'Haze_09427' => 'cav', 'Haze_12022' => 'cav', 'Haze_17612' => 'cav', 'Haze_17928' => 'cav', 'Hma1.2p1_0032F.1_g019250' => 'hma', 'Hma1.2p1_0163F.1_g072690' => 'hma', 'Hma1.2p1_0265F.1_g106710' => 'hma', 'Hma1.2p1_0286F.1_g113970' => 'hma', 'Hma1.2p1_0363F.1_g136640' => 'hma', 'Hma1.2p1_0584F.1_g183470' => 'hma', 'Hma1.2p1_0885F.1_g232570' => 'hma', 'HPP92_006022' => 'vpl', 'HPP92_007320' => 'vpl', 'HPP92_011521' => 'vpl', 'HPP92_019387' => 'vpl', 'HPP92_024038' => 'vpl', 'Hund05891' => 'sun', 'Hund06450' => 'sun', 'Hund12053' => 'sun', 'Hund16800' => 'sun', 'Hund21222' => 'sun', 'Hund22896' => 'sun', 'Hund23746' => 'sun', 'Hund27083' => 'sun', 'Lalb_Chr02g0141831' => 'lal', 'Lalb_Chr02g0141841' => 'lal', 'Lalb_Chr05g0220411' => 'lal', 'Lalb_Chr06g0162081' => 'lal', 'Lalb_Chr09g0327651' => 'lal', 'Lalb_Chr13g0295051' => 'lal', 'Lalb_Chr15g0086801' => 'lal', 'Lalb_Chr16g0383781' => 'lal', 'Lalb_Chr16g0383791' => 'lal', 'Lalb_Chr18g0055441' => 'lal', 'Lalb_Chr18g0059611' => 'lal', 'Lalb_Chr20g0109661' => 'lal', 'Lalb_Chr20g0109831' => 'lal', 'Lalb_Chr20g0121871' => 'lal', 'Lalb_Chr22g0355361' => 'lal', 'Lalb_Chr25g0286371' => 'lal', 'Lj1A1187G43' => 'lonja', 'Lj1A1205T50' => 'lonja', 'Lj1A800G33' => 'lonja', 'Lj1C1187T7' => 'lonja', 'Lj1C843T11' => 'lonja', 'Lj1g0010940' => 'lja', 'Lj2A288T69' => 'lonja', 'Lj3g0024276' => 'lja', 'Lj4A47T76' => 'lonja', 'Lj4g0005805' => 'lja', 'Lj4g0006097' => 'lja', 'Lj4g0008528' => 'lja', 'Lj4g0024907' => 'lja', 'Lj5g0012472' => 'lja', 'Lj5g0018648' => 'lja', 'Lj6C789G1' => 'lonja', 'Lj6g0004000' => 'lja', 'Lj7A292G67' => 'lonja', 'Lj7A292T64' => 'lonja', 'Lj9A400T58' => 'lonja', 'Lsat_1_v5_gn_1_126181' => 'lsa', 'Lsat_1_v5_gn_4_123041' => 'lsa', 'Lsat_1_v5_gn_4_133620' => 'lsa', 'Lsat_1_v5_gn_4_53221' => 'lsa', 'Lsat_1_v5_gn_4_71961' => 'lsa', 'Lsat_1_v5_gn_7_105241' => 'lsa', 'Lsat_1_v5_gn_7_21361' => 'lsa', 'Lsat_1_v5_gn_7_28860' => 'lsa', 'Lsat_1_v5_gn_7_31260' => 'lsa', 'Lsat_1_v5_gn_8_52801' => 'lsa', 'Manes.02G191400' => 'mes', 'Manes.03G110100' => 'mes', 'Manes.04G071100' => 'mes', 'Manes.05G100500' => 'mes', 'Manes.05G164700' => 'mes', 'Manes.15G087000' => 'mes', 'Manes.15G121500' => 'mes', 'Manes.16G028300' => 'mes', 'Manes.17G046100' => 'mes', 'Manes.17G069800' => 'mes', 'Manes.18G100500' => 'mes', 'Mapoly0002s0109' => 'mpo', 'Mapoly0024s0007' => 'mpo', 'Mapoly0089s0032' => 'mpo', 'MBI04_g42241_MAGBIO' => 'mbi', 'MBI05_g11988_MAGBIO' => 'mbi', 'MBI05_g35452_MAGBIO' => 'mbi', 'MBI07_g30179_MAGBIO' => 'mbi', 'MBI07_g35859_MAGBIO' => 'mbi', 'MBI07_g35860_MAGBIO' => 'mbi', 'MBI07_g37166_MAGBIO' => 'mbi', 'MBI08_g18172_MAGBIO' => 'mbi', 'MBI09_g08441_MAGBIO' => 'mbi', 'MBI13_g01676_MAGBIO' => 'mbi', 'MBI14_g42955_MAGBIO' => 'mbi', 'MBI16_g13161_MAGBIO' => 'mbi', 'MBI17_g27204_MAGBIO' => 'mbi', 'MBI19_g21595_MAGBIO' => 'mbi', 'MD00G1148400' => 'mdo', 'MD02G1301200' => 'mdo', 'MD03G1227800' => 'mdo', 'MD05G1041100' => 'mdo', 'MD05G1124800' => 'mdo', 'MD05G1284000' => 'mdo', 'MD05G1338800' => 'mdo', 'MD05G1338900' => 'mdo', 'MD07G1022800' => 'mdo', 'MD10G1047500' => 'mdo', 'MD10G1127500' => 'mdo', 'MD10G1262300' => 'mdo', 'MD10G1293800' => 'mdo', 'MD16G1074300' => 'mdo', 'Medtr1g021670' => 'mtr', 'Medtr1g096320' => 'mtr', 'Medtr2g013690' => 'mtr', 'Medtr2g019450' => 'mtr', 'Medtr2g085170' => 'mtr', 'Medtr4g088785' => 'mtr', 'Medtr8g055930' => 'mtr', 'Medtr8g085850' => 'mtr', 'MELO3C002605.2' => 'cme', 'MELO3C003891.2' => 'cme', 'MELO3C004012.2' => 'cme', 'MELO3C007134.2' => 'cme', 'MELO3C008118.2' => 'cme', 'MELO3C016700.2' => 'cme', 'MELO3C024127.2' => 'cme', 'MELO3C033361.2' => 'cme', 'MELO3C033362.2' => 'cme', 'Migut.C00430' => 'egut', 'Migut.C01246' => 'egut', 'Migut.E00101' => 'egut', 'Migut.H01486' => 'egut', 'Migut.H01939' => 'egut', 'Migut.K00360' => 'egut', 'Migut.M00910' => 'egut', 'Migut.M01139' => 'egut', 'Migut.N02677' => 'egut', 'MSTRG.13252' => 'ama', 'MSTRG.14701' => 'ama', 'MSTRG.1521' => 'ama', 'MSTRG.15884' => 'ama', 'MSTRG.16242' => 'ama', 'MSTRG.22285' => 'ama', 'MSTRG.22444' => 'ama', 'MSTRG.2349' => 'ama', 'MSTRG.26308' => 'ama', 'MSTRG.28296' => 'ama', 'MSTRG.9895' => 'ama', 'Nitab4.5_0000110g0060' => 'nta', 'Nitab4.5_0000420g0130' => 'nta', 'Nitab4.5_0000422g0030' => 'nta', 'Nitab4.5_0000560g0180' => 'nta', 'Nitab4.5_0000703g0100' => 'nta', 'Nitab4.5_0000786g0200' => 'nta', 'Nitab4.5_0001336g0020' => 'nta', 'Nitab4.5_0001796g0030' => 'nta', 'Nitab4.5_0003348g0060' => 'nta', 'Nitab4.5_0003698g0040' => 'nta', 'Nitab4.5_0003942g0090' => 'nta', 'Nitab4.5_0004775g0070' => 'nta', 'Nitab4.5_0004864g0030' => 'nta', 'Nitab4.5_0005615g0020' => 'nta', 'Nitab4.5_0009288g0030' => 'nta', 'Nitab4.5_0009341g0010' => 'nta', 'Nitab4.5_0009535g0010' => 'nta', 'Nn1g03995' => 'nnu', 'Nn1g04100' => 'nnu', 'Nn1g06530' => 'nnu', 'Nn3g16404' => 'nnu', 'Nn3g17212' => 'nnu', 'Nn3g20776' => 'nnu', 'Nn3g21923' => 'nnu', 'Nn5g27737' => 'nnu', 'Nn5g29461' => 'nnu', 'Nn7g38355' => 'nnu', 'Nn8g39873' => 'nnu', 'Oeu000548.2' => 'oeu', 'Oeu004672.1' => 'oeu', 'Oeu015605.2' => 'oeu', 'Oeu016092.1' => 'oeu', 'Oeu017879.3' => 'oeu', 'Oeu024910.1' => 'oeu', 'Oeu028965.1' => 'oeu', 'Oeu031269.1' => 'oeu', 'Oeu031270.1' => 'oeu', 'Oeu032535.1' => 'oeu', 'Oeu034151.1' => 'oeu', 'Oeu034152.1' => 'oeu', 'Oeu034588.2' => 'oeu', 'Oeu050846.1' => 'oeu', 'Oeu050849.2' => 'oeu', 'Oeu051063.2' => 'oeu', 'Oeu052368.1' => 'oeu', 'Oeu052370.1' => 'oeu', 'Os01g0210400' => 'osa', 'Os01g0304300' => 'osa', 'Os01g0749100' => 'osa', 'Os02g0745800' => 'osa', 'Os03g0769050' => 'osa', 'Os05g0531500' => 'osa', 'Os06g0724300' => 'osa', 'Os11g0198100' => 'osa', 'Peaxi162Scf00069g01425' => 'pax', 'Peaxi162Scf00280g00811' => 'pax', 'Peaxi162Scf00310g00615' => 'pax', 'Peaxi162Scf00362g00542' => 'pax', 'Peaxi162Scf00461g00310' => 'pax', 'Peaxi162Scf00530g00118' => 'pax', 'Peaxi162Scf00541g00057' => 'pax', 'Peaxi162Scf00661g00017' => 'pax', 'Peaxi162Scf00926g00027' => 'pax', 'Peaxi162Scf01064g00263' => 'pax', 'Peaxi162Scf01211g00135' => 'pax', 'PGR004G2336' => 'pgr', 'PGR042G0327' => 'pgr', 'PGR042G1957' => 'pgr', 'PGR042G2003' => 'pgr', 'PGR042G3929' => 'pgr', 'PGR083G1137' => 'pgr', 'PGR083G1364' => 'pgr', 'PGSC0003DMG400003381' => 'stu', 'PGSC0003DMG400003417' => 'stu', 'PGSC0003DMG400008981' => 'stu', 'PGSC0003DMG400012417' => 'stu', 'PGSC0003DMG400012823' => 'stu', 'PGSC0003DMG400016885' => 'stu', 'PGSC0003DMG400022812' => 'stu', 'PGSC0003DMG400029726' => 'stu', 'PGSC0003DMG401009243' => 'stu', 'PGSC0003DMG401031505' => 'stu', 'PGSC0003DMG402031505' => 'stu', 'Phvul.001G017600' => 'pvu', 'Phvul.002G193500' => 'pvu', 'Phvul.002G228900' => 'pvu', 'Phvul.002G236800' => 'pvu', 'Phvul.003G049500' => 'pvu', 'Phvul.005G072000' => 'pvu', 'Phvul.006G164800' => 'pvu', 'Phvul.006G185100' => 'pvu', 'Phvul.007G090000' => 'pvu', 'Potri.001G399800' => 'ptr', 'Potri.002G149900' => 'ptr', 'Potri.004G044100' => 'ptr', 'Potri.004G177600' => 'ptr', 'Potri.009G138000' => 'ptr', 'Potri.010G094000' => 'ptr', 'Potri.011G053000' => 'ptr', 'Potri.011G119300' => 'ptr', 'Potri.013G113700' => 'ptr', 'Potri.018G107800' => 'ptr', 'Potri.019G084100' => 'ptr', 'Pp3c14_23720' => 'ppa', 'Pp3c16_6340' => 'ppa', 'Pp3c23_13420' => 'ppa', 'Pp3c24_2740' => 'ppa', 'Pp3c25_860' => 'ppa', 'Pp3c8_21750' => 'ppa', 'Prupe.1G273000' => 'ppe', 'Prupe.1G273700' => 'ppe', 'Prupe.1G274100' => 'ppe', 'Prupe.2G023300' => 'ppe', 'Prupe.4G048000' => 'ppe', 'Prupe.4G080400' => 'ppe', 'Prupe.4G181200' => 'ppe', 'Prupe.8G056900' => 'ppe', 'Prupe.8G168700' => 'ppe', 'Psat1g189080' => 'psa', 'Psat1g204760' => 'psa', 'Psat4g175560' => 'psa', 'Psat4g177720' => 'psa', 'Psat5g244240' => 'psa', 'Psat6g010720' => 'psa', 'Psat6g187200' => 'psa', 'Psat7g072040' => 'psa', 'PSO017G3501' => 'pso', 'PSO063G2148' => 'pso', 'PSO063G5608' => 'pso', 'PSO210G6392' => 'pso', 'PSO541G2319' => 'pso', 'PSO541G2836' => 'pso', 'PSO541G4012' => 'pso', 'PSO541G6253' => 'pso', 'PSO675G0580' => 'pso', 'PSO675G0856' => 'pso', 'PSO675G5635' => 'pso', 'PSO675G9157' => 'pso', 'PSO832G1660' => 'pso', 'PSO832G1969' => 'pso', 'QL02p007186' => 'qlo', 'QL02p033904' => 'qlo', 'QL03p064391' => 'qlo', 'QL05p040593' => 'qlo', 'QL05p058242' => 'qlo', 'QL08p021825' => 'qlo', 'QL11p004981' => 'qlo', 'RcHm_v2.0_Chr1g0318301' => 'rch', 'RcHm_v2.0_Chr4g0418501' => 'rch', 'RcHm_v2.0_Chr4g0439971' => 'rch', 'RcHm_v2.0_Chr5g0008541' => 'rch', 'RcHm_v2.0_Chr5g0014101' => 'rch', 'RcHm_v2.0_Chr5g0014131' => 'rch', 'RcHm_v2.0_Chr5g0033621' => 'rch', 'RcHm_v2.0_Chr6g0272041' => 'rch', 'RcHm_v2.0_Chr6g0278831' => 'rch', 'Rhsim02G0130400' => 'rsi', 'Rhsim02G0171100' => 'rsi', 'Rhsim05G0053000' => 'rsi', 'Rhsim05G0053100' => 'rsi', 'Rhsim06G0096500' => 'rsi', 'Rhsim06G0096600' => 'rsi', 'Rhsim06G0199100' => 'rsi', 'Rhsim12G0062300' => 'rsi', 'Rhsim12G0062800' => 'rsi', 'Sabra02G0118600' => 'sbr', 'Sabra04G0027300' => 'sbr', 'Sabra04G0119500' => 'sbr', 'Sabra08G0112500' => 'sbr', 'Sabra11G0036800' => 'sbr', 'Sabra11G0103800' => 'sbr', 'Sabra13G0096300' => 'sbr', 'Sabra16G0262300' => 'sbr', 'Sabra18G0091700' => 'sbr', 'Sabra19G0095400' => 'sbr', 'SalBow6G3080' => 'sbo', 'SalBow7G1157' => 'sbo', 'SalBow7G2123' => 'sbo', 'SalBow7G2285' => 'sbo', 'SalBow7G3537' => 'sbo', 'SalBow8G2947' => 'sbo', 'SalBow8G4463' => 'sbo', 'SalBow8G5466' => 'sbo', 'Sc01g0001750' => 'sci', 'Sc02g0006640' => 'sci', 'Sc02g0006670' => 'sci', 'Sc04g0008220' => 'sci', 'Sc05g0006190' => 'sci', 'Sc08g0002760' => 'sci', 'Sc17g0006170' => 'sci', 'Sc22g0002050' => 'sci', 'Sc23g0001190' => 'sci', 'Sc24g0000980' => 'sci', 'Sed0006245' => 'sed', 'Sed0007543' => 'sed', 'Sed0009411' => 'sed', 'Sed0010765' => 'sed', 'Sed0012944' => 'sed', 'Sed0014682' => 'sed', 'Sed0016174' => 'sed', 'Sed0016796' => 'sed', 'Sed0020317' => 'sed', 'Sed0021467' => 'sed', 'SEGI_01316' => 'sgi', 'SEGI_03374' => 'sgi', 'SEGI_16265' => 'sgi', 'SEGI_18569' => 'sgi', 'SEGI_20351' => 'sgi', 'SEGI_26395' => 'sgi', 'SEGI_29469' => 'sgi', 'SEGI_34771' => 'sgi', 'SEGI_36769' => 'sgi', 'SEGI_37139' => 'sgi', 'SGA_v2.0_scaffold100G29687' => 'sas', 'SGA_v2.0_scaffold118G32472' => 'sas', 'SGA_v2.0_scaffold14G07051' => 'sas', 'SGA_v2.0_scaffold183G39845' => 'sas', 'SGA_v2.0_scaffold1G00174' => 'sas', 'SGA_v2.0_scaffold22G09714' => 'sas', 'SGA_v2.0_scaffold333G48992' => 'sas', 'SGA_v2.0_scaffold46G17491' => 'sas', 'SGA_v2.0_scaffold49G18294' => 'sas', 'SGA_v2.0_scaffold63G21658' => 'sas', 'SHI01741' => 'shi', 'SHI05771' => 'shi', 'SHI18077' => 'shi', 'SHI20525' => 'shi', 'SHI20527' => 'shi', 'SHI20528' => 'shi', 'SMO172G0185' => 'smo', 'SMO198G0020' => 'smo', 'SMO351G0006' => 'smo', 'SMO356G0118' => 'smo', 'SMO358G0296' => 'smo', 'SMO367G0079' => 'smo', 'SMO367G1277' => 'smo', 'Solyc01g014220.3' => 'sly', 'Solyc01g111770.2' => 'sly', 'Solyc02g078180.3' => 'sly', 'Solyc03g006430.3' => 'sly', 'Solyc03g006456.1' => 'sly', 'Solyc03g079860.2' => 'sly', 'Solyc04g079770.3' => 'sly', 'Solyc05g007430.4' => 'sly', 'Solyc07g063150.3' => 'sly', 'Solyc08g016620.3' => 'sly', 'Solyc09g057590.3' => 'sly', 'Solyc09g057600.1' => 'sly', 'Solyc10g009050.3' => 'sly', 'Solyc11g017420.2' => 'sly', 'Sopen01g053810' => 'spe', 'Sopen02g023040' => 'spe', 'Sopen03g002440' => 'spe', 'Sopen04g033350' => 'spe', 'Sopen05g003310' => 'spe', 'Sopen07g004050' => 'spe', 'Sopen07g031340' => 'spe', 'Sopen08g006990' => 'spe', 'Sopen10g004830' => 'spe', 'Sopen11g009370' => 'spe', 'Sp1g24450' => 'spa', 'Sp1g29670' => 'spa', 'Sp1g39600' => 'spa', 'Sp2g11080' => 'spa', 'Sp2g13970' => 'spa', 'Sp4g16130' => 'spa', 'Sp6g13080' => 'spa', 'Sp7g37270' => 'spa', 'TAR371G0065' => 'tar', 'TAR376G0340' => 'tar', 'TAR376G0435' => 'tar', 'TAR381G0002' => 'tar', 'TAR381G1236' => 'tar', 'TAR624G0055' => 'tar', 'TAR624G0324' => 'tar', 'TAR624G0696' => 'tar', 'TAR624G0906' => 'tar', 'TAR625G0107' => 'tar', 'TAR626G0015' => 'tar', 'TAR626G1356' => 'tar', 'TAR627G0888' => 'tar', 'TAR628G0399' => 'tar', 'TAR628G1327' => 'tar', 'TAR629G2831' => 'tar', 'TAR629G2874' => 'tar', 'TAR633G1432' => 'tar', 'TAR633G2771' => 'tar', 'THA.LOC104803394' => 'tha', 'THA.LOC104805153' => 'tha', 'THA.LOC104806784' => 'tha', 'THA.LOC104810473' => 'tha', 'THA.LOC104813100' => 'tha', 'THA.LOC104814215' => 'tha', 'THA.LOC104815554' => 'tha', 'THA.LOC104820544' => 'tha', 'THA.LOC104824754' => 'tha', 'THA.LOC104827717' => 'tha', 'Thecc.02G031400' => 'tca', 'Thecc.02G055900' => 'tca', 'Thecc.02G350800' => 'tca', 'Thecc.06G150900' => 'tca', 'Thecc.06G186600' => 'tca', 'Thecc.07G089600' => 'tca', 'Thecc.08G020400' => 'tca', 'Thecc.08G182100' => 'tca', 'Thhalv10000873m.g' => 'esa', 'Thhalv10004185m.g' => 'esa', 'Thhalv10006981m.g' => 'esa', 'Thhalv10007204m.g' => 'esa', 'Thhalv10011374m.g' => 'esa', 'Thhalv10013482m.g' => 'esa', 'Thhalv10017801m.g' => 'esa', 'Thhalv10024983m.g' => 'esa', 'TPR.G12072' => 'tpr', 'TPR.G15769' => 'tpr', 'TPR.G16504' => 'tpr', 'TPR.G16506' => 'tpr', 'TPR.G24345' => 'tpr', 'TPR.G26666' => 'tpr', 'TPR.G27320' => 'tpr', 'TPR.G31819' => 'tpr', 'TPR.G38879' => 'tpr', 'TPR.G39015' => 'tpr', 'TPR.G8819' => 'tpr', 'TWI09G0924' => 'twi', 'TWI12G0811' => 'twi', 'TWI12G1294' => 'twi', 'TWI31G0150' => 'twi', 'TWI36G1262' => 'twi', 'TWI38G1287' => 'twi', 'TWI38G1633' => 'twi', 'TWI38G1982' => 'twi', 'TWI39G0116' => 'twi', 'TWI60G1011' => 'twi', 'TWI63G0171' => 'twi', 'TWI73G0839' => 'twi', 'TWI79G1511' => 'twi', 'unitig_0.g915' => 'ugi', 'unitig_0.g916' => 'ugi', 'unitig_21.g20219' => 'ugi', 'unitig_21.g20416' => 'ugi', 'unitig_578.g16132' => 'ugi', 'unitig_578.g16718' => 'ugi', 'unitig_62.g23481' => 'ugi', 'unitig_744.g24535' => 'ugi', 'unitig_749.g13525' => 'ugi', 'vmacro01248' => 'vma', 'vmacro02290' => 'vma', 'vmacro10946' => 'vma', 'vmacro11865' => 'vma', 'vmacro12493' => 'vma', 'vmacro17322' => 'vma', 'vmacro21599' => 'vma', 'vmacro23041' => 'vma', 'VMungo0251G0004' => 'vmu', 'VMungo0251G2639' => 'vmu', 'VMungo0251G2967' => 'vmu', 'VMungo0540G0864' => 'vmu', 'VMungo0540G1569' => 'vmu', 'VMungo0647G0317' => 'vmu', 'VMungo0720G1373' => 'vmu', 'VMungo0720G1508' => 'vmu', 'VMungo1080G0485' => 'vmu', 'VMungo1215G3177' => 'vmu', 'Zm00001eb112600' => 'zma', 'Zm00001eb120220' => 'zma', 'Zm00001eb153240' => 'zma', 'Zm00001eb168880' => 'zma', 'Zm00001eb213920' => 'zma', 'Zm00001eb228280' => 'zma', 'Zm00001eb254580' => 'zma', 'Zm00001eb272180' => 'zma', 'Zm00001eb293190' => 'zma', 'Zm00001eb322930' => 'zma', 'Zm00001eb353360' => 'zma', 'Zm00001eb353390' => 'zma', 'Zm00001eb353430' => 'zma', 'Zm00001eb353440' => 'zma', 'Zm00001eb353780' => 'zma' ) $gf_id = 'HOM05D000499' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000499' ) $data_identifier = 'HOM05D000499' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 29, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 12, 'amhyb' => (int) 8, 'aly' => (int) 12, 'aox' => (int) 9, 'arhy' => (int) 26, 'ath' => (int) 8, 'atr' => (int) 7, 'acertr' => (int) 10, 'cqu' => (int) 15, 'bca' => (int) 29, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 11, 'cansat' => (int) 8, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 9, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 8, 'cpa' => (int) 10, 'csa' => (int) 7, 'camsi' => (int) 20, 'dca' => (int) 8, 'din' => (int) 12, 'dzi' => (int) 14, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 6, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 38, 'gra' => (int) 16, 'vvi' => (int) 8, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 5, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 11, 'lja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 11, 'mpo' => (int) 3, 'mbi' => (int) 14, 'mdo' => (int) 14, 'mtr' => (int) 8, 'cme' => (int) 9, 'egut' => (int) 9, 'ama' => (int) 11, 'nta' => (int) 17, 'nnu' => (int) 11, 'oeu' => (int) 18, 'osa' => (int) 8, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 6, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 9, 'rsi' => (int) 9, 'sbr' => (int) 10, 'sbo' => (int) 8, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 10, 'sas' => (int) 10, 'shi' => (int) 6, 'smo' => (int) 7, 'sly' => (int) 14, 'spe' => (int) 10, 'spa' => (int) 8, 'tar' => (int) 19, 'tha' => (int) 10, 'tca' => (int) 8, 'esa' => (int) 8, 'tpr' => (int) 11, 'twi' => (int) 13, 'ugi' => (int) 9, 'vma' => (int) 8, 'vmu' => (int) 10, 'zma' => (int) 15 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb353780' $species_info = array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ) $local_species = 'cav' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000499', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1066', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p29780' => 'bna', 'A02p33180' => 'bna', 'A03p16470' => 'bna', 'A03p66010' => 'bna', 'A04p25970' => 'bna', 'A06p01270' => 'bna', 'A06p46080' => 'bna', 'A07p11400' => 'bna', 'A08p01840' => 'bna', 'A08p08230' => 'bna', 'A08p25740' => 'bna', 'A09p32070' => 'bna', 'A09p37830' => 'bna', 'A09p42840' => 'bna', 'A09p42850' => 'bna', 'Aa31LG10G2060' => 'aar', 'Aa31LG2G7410' => 'aar', 'Aa31LG6G10200' => 'aar', 'Aa31LG6G16680' => 'aar', 'Aa31LG6G8470' => 'aar', 'Aa31LG9G12730' => 'aar', 'Aa31LG9G13680' => 'aar', 'Aa31LG9G14920' => 'aar', 'Aa31LG9G6650' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4977' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5467' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3254' => 'aag', 'Actinidia02578' => 'ach', 'Actinidia07693' => 'ach', 'Actinidia08413' => 'ach', 'Actinidia08414' => 'ach', 'Actinidia15289' => 'ach', 'Actinidia19871' => 'ach', 'Actinidia21475' => 'ach', 'Actinidia22576' => 'ach', 'Actinidia28327' => 'ach', 'Actinidia32491' => 'ach', 'Actinidia39463' => 'ach', 'Actinidia39571' => 'ach', 'Ah.01g013750' => 'amhyb', 'Ah.01g023210' => 'amhyb', 'Ah.04g164850' => 'amhyb', 'Ah.05g178060' => 'amhyb', 'Ah.07g204270' => 'amhyb', 'Ah.07g208480' => 'amhyb', 'Ah.09g237410' => 'amhyb', 'Ah.14g089460' => 'amhyb', 'AL1G41790' => 'aly', 'AL1G49050' => 'aly', 'AL1G53810' => 'aly', 'AL1G61400' => 'aly', 'AL4G18580' => 'aly', 'AL5G12510' => 'aly', 'AL5G12540' => 'aly', 'AL6G43230' => 'aly', 'AL7G10370' => 'aly', 'AL7G19250' => 'aly', 'AL8G12240' => 'aly', 'AL8G18540' => 'aly', 'Aqoxy1G02409' => 'aox', 'Aqoxy2G03993' => 'aox', 'Aqoxy3G03357' => 'aox', 'Aqoxy4G00785' => 'aox', 'Aqoxy5G02598' => 'aox', 'Aqoxy6G00132' => 'aox', 'Aqoxy7G01776' => 'aox', 'Aqoxy7G02316' => 'aox', 'Aqoxy7G03973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.12AFKW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B8730' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27IQR1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3F75VG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3RE0GA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41TCQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.527VTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FIR39' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5W8UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DA38EV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ63HS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H1I32C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HC27T5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4M8AP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7N3CZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9UVDZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LS1NQA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT1D4B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SKC4TM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCFV76' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF9Q1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQWD9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1ZM88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WE07RT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YCK7VH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJE6Q6' => 'arhy', 'AT1G28240' => 'ath', 'AT1G34550' => 'ath', 'AT1G53040' => 'ath', 'AT2G02910' => 'ath', 'AT4G09630' => 'ath', 'AT4G38500' => 'ath', 'AT5G42660' => 'ath', 'AT5G46220' => 'ath', 'ATR0152G026' => 'atr', 'ATR0564G343' => 'atr', 'ATR0706G151' => 'atr', 'ATR0733G207' => 'atr', 'ATR0751G234' => 'atr', 'ATR0807G048' => 'atr', 'ATR1091G084' => 'atr', 'Atru.chr10.1229' => 'acertr', 'Atru.chr10.1230' => 'acertr', 'Atru.chr10.1874' => 'acertr', 'Atru.chr11.1808' => 'acertr', 'Atru.chr13.1795' => 'acertr', 'Atru.chr13.570' => 'acertr', 'Atru.chr2.2608' => 'acertr', 'Atru.chr2.2609' => 'acertr', 'Atru.chr5.3428' => 'acertr', 'Atru.chr8.1171' => 'acertr', 'AUR62004651' => 'cqu', 'AUR62008675' => 'cqu', 'AUR62010014' => 'cqu', 'AUR62013004' => 'cqu', 'AUR62014825' => 'cqu', 'AUR62015015' => 'cqu', 'AUR62015151' => 'cqu', 'AUR62017020' => 'cqu', 'AUR62019422' => 'cqu', 'AUR62023570' => 'cqu', 'AUR62025571' => 'cqu', 'AUR62029098' => 'cqu', 'AUR62033863' => 'cqu', 'AUR62034296' => 'cqu', 'AUR62040075' => 'cqu', 'BcaB02g07334' => 'bca', 'BcaB02g10575' => 'bca', 'BcaB03g12119' => 'bca', 'BcaB03g12120' => 'bca', 'BcaB03g13945' => 'bca', 'BcaB04g17123' => 'bca', 'BcaB04g17867' => 'bca', 'BcaB04g19839' => 'bca', 'BcaB07g30317' => 'bca', 'BcaB07g32432' => 'bca', 'BcaB07g33362' => 'bca', 'BcaB08g36611' => 'bca', 'BcaC01g00028' => 'bca', 'BcaC01g01356' => 'bca', 'BcaC01g02034' => 'bca', 'BcaC01g06051' => 'bca', 'BcaC03g16839' => 'bca', 'BcaC03g17176' => 'bca', 'BcaC05g26829' => 'bca', 'BcaC06g31490' => 'bca', 'BcaC06g35344' => 'bca', 'BcaC06g36570' => 'bca', 'BcaC07g37537' => 'bca', 'BcaC08g43491' => 'bca', 'BcaC08g43773' => 'bca', 'BcaNung00234' => 'bca', 'BcaNung01982' => 'bca', 'BcaNung03707' => 'bca', 'BcaNung06454' => 'bca', 'BolC2t10762H' => 'bol', 'BolC2t11191H' => 'bol', 'BolC3t14322H' => 'bol', 'BolC3t19747H' => 'bol', 'BolC3t21425H' => 'bol', 'BolC4t27800H' => 'bol', 'BolC5t31423H' => 'bol', 'BolC6t35951H' => 'bol', 'BolC6t36282H' => 'bol', 'BolC7t40678H' => 'bol', 'BolC7t40679H' => 'bol', 'BolC7t42222H' => 'bol', 'BolC7t43492H' => 'bol', 'BolC7t46785H' => 'bol', 'BolC8t47853H' => 'bol', 'BolC9t56805H' => 'bol', 'BraA02t08000Z' => 'bra', 'BraA02t08341Z' => 'bra', 'BraA03t10936Z' => 'bra', 'BraA03t15657Z' => 'bra', 'BraA04t18100Z' => 'bra', 'BraA05t20523Z' => 'bra', 'BraA06t23353Z' => 'bra', 'BraA06t27473Z' => 'bra', 'BraA06t27769Z' => 'bra', 'BraA07t28928Z' => 'bra', 'BraA08t32236Z' => 'bra', 'BraA08t32841Z' => 'bra', 'BraA08t34524Z' => 'bra', 'BraA09t38742Z' => 'bra', 'BraA09t39295Z' => 'bra', 'C02p47180' => 'bna', 'C02p50990' => 'bna', 'C03p19360' => 'bna', 'C03p74950' => 'bna', 'C03p91000' => 'bna', 'C04p63260' => 'bna', 'C05p27050' => 'bna', 'C06p08750' => 'bna', 'C06p11490' => 'bna', 'C07p02820' => 'bna', 'C07p17180' => 'bna', 'C07p29440' => 'bna', 'C07p63730' => 'bna', 'C09p39260' => 'bna', 'CAN.G1164.34' => 'can', 'CAN.G1164.39' => 'can', 'CAN.G1530.3' => 'can', 'CAN.G162.61' => 'can', 'CAN.G176.6' => 'can', 'CAN.G289.49' => 'can', 'CAN.G370.21' => 'can', 'CAN.G370.22' => 'can', 'CAN.G371.117' => 'can', 'CAN.G58.37' => 'can', 'CAN.G588.98' => 'can', 'CANSAT21G2266' => 'cansat', 'CANSAT25G2799' => 'cansat', 'CANSAT35G0862' => 'cansat', 'CANSAT35G1704' => 'cansat', 'CANSAT35G1760' => 'cansat', 'CANSAT56G3971' => 'cansat', 'CANSAT56G4116' => 'cansat', 'CANSAT80G1259' => 'cansat', 'CARHR027730' => 'chi', 'CARHR033880' => 'chi', 'CARHR043270' => 'chi', 'CARHR145330' => 'chi', 'CARHR145340' => 'chi', 'CARHR175570' => 'chi', 'CARHR181570' => 'chi', 'CARHR258470' => 'chi', 'CARHR260490' => 'chi', 'CARHR294220' => 'chi', 'Carub.0001s2668' => 'cru', 'Carub.0001s3257' => 'cru', 'Carub.0001s4220' => 'cru', 'Carub.0005s0179' => 'cru', 'Carub.0006s2807' => 'cru', 'Carub.0007s0039' => 'cru', 'Carub.0008s0169' => 'cru', 'Carub.0008s0636' => 'cru', 'Ca_00338_v3' => 'car', 'Ca_00542_v3' => 'car', 'Ca_01844_v3' => 'car', 'Ca_10611_v3' => 'car', 'Ca_13326_v3' => 'car', 'Ca_17944_v3' => 'car', 'Ca_18546_v3' => 'car', 'Ca_24219_v3' => 'car', 'Ca_29972_v3' => 'car', 'CBR_g3681' => 'cbr', 'CBR_g40021' => 'cbr', 'Cc01_g08140' => 'ccan', 'Cc02_g13410' => 'ccan', 'Cc02_g37480' => 'ccan', 'Cc05_g12030' => 'ccan', 'Cc09_g03370' => 'ccan', 'Cc09_g10300' => 'ccan', 'Cc10_g03530' => 'ccan', 'Cc10_g11380' => 'ccan', 'CDE01G0176' => 'cde', 'CDE02G0675' => 'cde', 'CDE02G0942' => 'cde', 'CDE02G1153' => 'cde', 'CDE02G4177' => 'cde', 'CDE04G2117' => 'cde', 'CDE04G2736' => 'cde', 'CDE08G1161' => 'cde', 'CDE09G1238' => 'cde', 'Cfa000467' => 'cfa', 'Cfa000947' => 'cfa', 'Cfa004969' => 'cfa', 'Cfa005284' => 'cfa', 'Cfa008993' => 'cfa', 'Cfa018187' => 'cfa', 'Cfa018454' => 'cfa', 'Cfa020585' => 'cfa', 'Ciclev10000424m.g' => 'ccl', 'Ciclev10003605m.g' => 'ccl', 'Ciclev10007828m.g' => 'ccl', 'Ciclev10014620m.g' => 'ccl', 'Ciclev10015169m.g' => 'ccl', 'Ciclev10018291m.g' => 'ccl', 'Ciclev10028256m.g' => 'ccl', 'Ciclev10033822m.g' => 'ccl', 'CiPaw.05G060300' => 'cil', 'CiPaw.05G085000' => 'cil', 'CiPaw.06G083700' => 'cil', 'CiPaw.06G120300' => 'cil', 'CiPaw.09G060500' => 'cil', 'CiPaw.09G123800' => 'cil', 'CiPaw.11G169700' => 'cil', 'CiPaw.12G118300' => 'cil', 'CiPaw.15G071000' => 'cil', 'CiPaw.15G081900' => 'cil', 'ClCG01G024610' => 'cla', 'ClCG03G006070' => 'cla', 'ClCG05G019250' => 'cla', 'ClCG09G009500' => 'cla', 'ClCG11G008200' => 'cla', 'ClCG11G018080' => 'cla', 'COL.COLO4_17373' => 'col', 'COL.COLO4_22994' => 'col', 'COL.COLO4_26389' => 'col', 'COL.COLO4_27170' => 'col', 'COL.COLO4_31074' => 'col', 'COL.COLO4_31465' => 'col', 'COL.COLO4_36438' => 'col', 'COL.COLO4_36439' => 'col', 'Cpa.g.c38781' => 'cpa', 'Cpa.g.sc128.12' => 'cpa', 'Cpa.g.sc166.7' => 'cpa', 'Cpa.g.sc166.8' => 'cpa', 'Cpa.g.sc20.111' => 'cpa', 'Cpa.g.sc27.31' => 'cpa', 'Cpa.g.sc64.36' => 'cpa', 'Cpa.g.sc64.37' => 'cpa', 'Cpa.g.sc66.49' => 'cpa', 'Cpa.g.sc80.64' => 'cpa', 'CsaV3_1G012320' => 'csa', 'CsaV3_2G008480' => 'csa', 'CsaV3_2G033450' => 'csa', 'CsaV3_3G044830' => 'csa', 'CsaV3_4G033710' => 'csa', 'CsaV3_6G051730' => 'csa', 'CsaV3_7G025350' => 'csa', 'CSS0001067' => 'camsi', 'CSS0005996' => 'camsi', 'CSS0006590' => 'camsi', 'CSS0009673' => 'camsi', 'CSS0010201' => 'camsi', 'CSS0010549' => 'camsi', 'CSS0011364' => 'camsi', 'CSS0014473' => 'camsi', 'CSS0014961' => 'camsi', 'CSS0020191' => 'camsi', 'CSS0021165' => 'camsi', 'CSS0022306' => 'camsi', 'CSS0030591' => 'camsi', 'CSS0030696' => 'camsi', 'CSS0032653' => 'camsi', 'CSS0037487' => 'camsi', 'CSS0041102' => 'camsi', 'CSS0041261' => 'camsi', 'CSS0046246' => 'camsi', 'CSS0049256' => 'camsi', 'DCAR_004075' => 'dca', 'DCAR_011538' => 'dca', 'DCAR_019553' => 'dca', 'DCAR_020952' => 'dca', 'DCAR_021739' => 'dca', 'DCAR_027407' => 'dca', 'DCAR_027913' => 'dca', 'DCAR_028066' => 'dca', 'Dinv05899' => 'din', 'Dinv07563' => 'din', 'Dinv08010' => 'din', 'Dinv14125' => 'din', 'Dinv20172' => 'din', 'Dinv30743' => 'din', 'Dinv31229' => 'din', 'Dinv34162' => 'din', 'Dinv36028' => 'din', 'Dinv39368' => 'din', 'Dinv40565' => 'din', 'Dinv41706' => 'din', 'Duzib052G0089' => 'dzi', 'Duzib116G0641' => 'dzi', 'Duzib132G0069' => 'dzi', 'Duzib132G1219' => 'dzi', 'Duzib147G0278' => 'dzi', 'Duzib160G0480' => 'dzi', 'Duzib170G0661' => 'dzi', 'Duzib177G0591' => 'dzi', 'Duzib187G1353' => 'dzi', 'Duzib192G0858' => 'dzi', 'Duzib192G0883' => 'dzi', 'Duzib213G0506' => 'dzi', 'Duzib235G0289' => 'dzi', 'Duzib251G0422' => 'dzi', 'ECA232G3898' => 'eca', 'ECA233G5950' => 'eca', 'ECA234G1699' => 'eca', 'ECA234G2421' => 'eca', 'ECA236G0426' => 'eca', 'ECA236G4331' => 'eca', 'ECA248G2573' => 'eca', 'EL10Ac1g00077' => 'bvu', 'EL10Ac1g01746' => 'bvu', 'EL10Ac2g03464' => 'bvu', 'EL10Ac4g08176' => 'bvu', 'EL10Ac7g17521' => 'bvu', 'EL10Ac8g20386' => 'bvu', 'EL10Ac9g21343' => 'bvu', 'EL10Ac9g22688' => 'bvu', 'Eucgr.B03434' => 'egr', 'Eucgr.D00618' => 'egr', 'Eucgr.E02395' => 'egr', 'Eucgr.F01129' => 'egr', 'Eucgr.F02622' => 'egr', 'Eucgr.F04207' => 'egr', 'FAN01G0570' => 'fan', 'FAN03G3351' => 'fan', 'FAN06G3702' => 'fan', 'FAN07G2149' => 'fan', 'FAN10G3758' => 'fan', 'FAN11G1170' => 'fan', 'FAN11G2050' => 'fan', 'FAN11G2724' => 'fan', 'FAN12G1700' => 'fan', 'FAN12G2028' => 'fan', 'FAN15G1160' => 'fan', 'FAN15G3063' => 'fan', 'FAN16G2540' => 'fan', 'FAN16G3077' => 'fan', 'FAN16G3624' => 'fan', 'FAN17G0221' => 'fan', 'FAN20G2492' => 'fan', 'FAN20G2905' => 'fan', 'FAN21G0548' => 'fan', 'FAN21G1300' => 'fan', 'FAN22G0077' => 'fan', 'FAN22G1315' => 'fan', 'FAN24G1280' => 'fan', 'FAN24G1445' => 'fan', 'FAN24G3527' => 'fan', 'FAN25G0464' => 'fan', 'FAN25G2885' => 'fan', 'FAN25G3270' => 'fan', 'FAN27G1101' => 'fan', 'FAN27G2846' => 'fan', 'FAN27G3524' => 'fan', 'FvH4_2g11770' => 'fve', 'FvH4_2g15630' => 'fve', 'FvH4_3g05570' => 'fve', 'FvH4_3g09110' => 'fve', 'FvH4_3g19940' => 'fve', 'FvH4_4g04821' => 'fve', 'FvH4_4g31480' => 'fve', 'FvH4_7g01740' => 'fve', 'Glyma.05G130400' => 'gma', 'Glyma.05G156400' => 'gma', 'Glyma.07G197000' => 'gma', 'Glyma.08G085151' => 'gma', 'Glyma.08G114500' => 'gma', 'Glyma.08G300400' => 'gma', 'Glyma.10G215800' => 'gma', 'Glyma.12G224400' => 'gma', 'Glyma.13G179300' => 'gma', 'Glyma.13G218151' => 'gma', 'Glyma.13G238800' => 'gma', 'Glyma.13G276900' => 'gma', 'Glyma.14G078200' => 'gma', 'Glyma.15G074500' => 'gma', 'Glyma.15G094100' => 'gma', 'Glyma.17G247200' => 'gma', 'Glyma.18G120100' => 'gma', 'Glyma.20G176000' => 'gma', 'Gohir.A01G063600' => 'ghi', 'Gohir.A01G170301' => 'ghi', 'Gohir.A02G060500' => 'ghi', 'Gohir.A05G133850' => 'ghi', 'Gohir.A05G161400' => 'ghi', 'Gohir.A06G012900' => 'ghi', 'Gohir.A06G035901' => 'ghi', 'Gohir.A06G127100' => 'ghi', 'Gohir.A06G210500' => 'ghi', 'Gohir.A08G008650' => 'ghi', 'Gohir.A09G072700' => 'ghi', 'Gohir.A09G088301' => 'ghi', 'Gohir.A10G040600' => 'ghi', 'Gohir.A12G036300' => 'ghi', 'Gohir.A12G143350' => 'ghi', 'Gohir.A12G165500' => 'ghi', 'Gohir.A13G145700' => 'ghi', 'Gohir.D01G050000' => 'ghi', 'Gohir.D01G051366' => 'ghi', 'Gohir.D01G161350' => 'ghi', 'Gohir.D02G065900' => 'ghi', 'Gohir.D05G164200' => 'ghi', 'Gohir.D05G355500' => 'ghi', 'Gohir.D06G010400' => 'ghi', 'Gohir.D06G111250' => 'ghi', 'Gohir.D06G132000' => 'ghi', 'Gohir.D06G210500' => 'ghi', 'Gohir.D07G165675' => 'ghi', 'Gohir.D08G062240' => 'ghi', 'Gohir.D08G086101' => 'ghi', 'Gohir.D08G138060' => 'ghi', 'Gohir.D09G072300' => 'ghi', 'Gohir.D10G041400' => 'ghi', 'Gohir.D11G191020' => 'ghi', 'Gohir.D11G212066' => 'ghi', 'Gohir.D12G036300' => 'ghi', 'Gohir.D12G168600' => 'ghi', 'Gohir.D13G150600' => 'ghi', 'Gorai.001G057300' => 'gra', 'Gorai.002G069900' => 'gra', 'Gorai.002G200000' => 'gra', 'Gorai.003G067600' => 'gra', 'Gorai.005G074800' => 'gra', 'Gorai.006G087300' => 'gra', 'Gorai.008G037500' => 'gra', 'Gorai.008G181400' => 'gra', 'Gorai.009G169400' => 'gra', 'Gorai.009G387900' => 'gra', 'Gorai.010G013300' => 'gra', 'Gorai.010G153800' => 'gra', 'Gorai.010G255800' => 'gra', 'Gorai.011G043700' => 'gra', 'Gorai.011G198900' => 'gra', 'Gorai.013G168400' => 'gra', 'GSVIVG01005212001' => 'vvi', 'GSVIVG01006163001' => 'vvi', 'GSVIVG01009625001' => 'vvi', 'GSVIVG01014338001' => 'vvi', 'GSVIVG01020005001' => 'vvi', 'GSVIVG01021450001' => 'vvi', 'GSVIVG01023975001' => 'vvi', 'GSVIVG01034490001' => 'vvi', 'HanXRQChr04g0112071' => 'han', 'HanXRQChr05g0131151' => 'han', 'HanXRQChr09g0262371' => 'han', 'HanXRQChr09g0268401' => 'han', 'HanXRQChr10g0279241' => 'han', 'HanXRQChr10g0297961' => 'han', 'HanXRQChr11g0326231' => 'han', 'HanXRQChr11g0328471' => 'han', 'HanXRQChr16g0507941' => 'han', 'HanXRQChr17g0560211' => 'han', 'Haze_02108' => 'cav', 'Haze_02428' => 'cav', 'Haze_05593' => 'cav', 'Haze_06448' => 'cav', 'Haze_09427' => 'cav', 'Haze_12022' => 'cav', 'Haze_17612' => 'cav', 'Haze_17928' => 'cav', 'Hma1.2p1_0032F.1_g019250' => 'hma', 'Hma1.2p1_0163F.1_g072690' => 'hma', 'Hma1.2p1_0265F.1_g106710' => 'hma', 'Hma1.2p1_0286F.1_g113970' => 'hma', 'Hma1.2p1_0363F.1_g136640' => 'hma', 'Hma1.2p1_0584F.1_g183470' => 'hma', 'Hma1.2p1_0885F.1_g232570' => 'hma', 'HPP92_006022' => 'vpl', 'HPP92_007320' => 'vpl', 'HPP92_011521' => 'vpl', 'HPP92_019387' => 'vpl', 'HPP92_024038' => 'vpl', 'Hund05891' => 'sun', 'Hund06450' => 'sun', 'Hund12053' => 'sun', 'Hund16800' => 'sun', 'Hund21222' => 'sun', 'Hund22896' => 'sun', 'Hund23746' => 'sun', 'Hund27083' => 'sun', 'Lalb_Chr02g0141831' => 'lal', 'Lalb_Chr02g0141841' => 'lal', 'Lalb_Chr05g0220411' => 'lal', 'Lalb_Chr06g0162081' => 'lal', 'Lalb_Chr09g0327651' => 'lal', 'Lalb_Chr13g0295051' => 'lal', 'Lalb_Chr15g0086801' => 'lal', 'Lalb_Chr16g0383781' => 'lal', 'Lalb_Chr16g0383791' => 'lal', 'Lalb_Chr18g0055441' => 'lal', 'Lalb_Chr18g0059611' => 'lal', 'Lalb_Chr20g0109661' => 'lal', 'Lalb_Chr20g0109831' => 'lal', 'Lalb_Chr20g0121871' => 'lal', 'Lalb_Chr22g0355361' => 'lal', 'Lalb_Chr25g0286371' => 'lal', 'Lj1A1187G43' => 'lonja', 'Lj1A1205T50' => 'lonja', 'Lj1A800G33' => 'lonja', 'Lj1C1187T7' => 'lonja', 'Lj1C843T11' => 'lonja', 'Lj1g0010940' => 'lja', 'Lj2A288T69' => 'lonja', 'Lj3g0024276' => 'lja', 'Lj4A47T76' => 'lonja', 'Lj4g0005805' => 'lja', 'Lj4g0006097' => 'lja', 'Lj4g0008528' => 'lja', 'Lj4g0024907' => 'lja', 'Lj5g0012472' => 'lja', 'Lj5g0018648' => 'lja', 'Lj6C789G1' => 'lonja', 'Lj6g0004000' => 'lja', 'Lj7A292G67' => 'lonja', 'Lj7A292T64' => 'lonja', 'Lj9A400T58' => 'lonja', 'Lsat_1_v5_gn_1_126181' => 'lsa', 'Lsat_1_v5_gn_4_123041' => 'lsa', 'Lsat_1_v5_gn_4_133620' => 'lsa', 'Lsat_1_v5_gn_4_53221' => 'lsa', 'Lsat_1_v5_gn_4_71961' => 'lsa', 'Lsat_1_v5_gn_7_105241' => 'lsa', 'Lsat_1_v5_gn_7_21361' => 'lsa', 'Lsat_1_v5_gn_7_28860' => 'lsa', 'Lsat_1_v5_gn_7_31260' => 'lsa', 'Lsat_1_v5_gn_8_52801' => 'lsa', 'Manes.02G191400' => 'mes', 'Manes.03G110100' => 'mes', 'Manes.04G071100' => 'mes', 'Manes.05G100500' => 'mes', 'Manes.05G164700' => 'mes', 'Manes.15G087000' => 'mes', 'Manes.15G121500' => 'mes', 'Manes.16G028300' => 'mes', 'Manes.17G046100' => 'mes', 'Manes.17G069800' => 'mes', 'Manes.18G100500' => 'mes', 'Mapoly0002s0109' => 'mpo', 'Mapoly0024s0007' => 'mpo', 'Mapoly0089s0032' => 'mpo', 'MBI04_g42241_MAGBIO' => 'mbi', 'MBI05_g11988_MAGBIO' => 'mbi', 'MBI05_g35452_MAGBIO' => 'mbi', 'MBI07_g30179_MAGBIO' => 'mbi', 'MBI07_g35859_MAGBIO' => 'mbi', 'MBI07_g35860_MAGBIO' => 'mbi', 'MBI07_g37166_MAGBIO' => 'mbi', 'MBI08_g18172_MAGBIO' => 'mbi', 'MBI09_g08441_MAGBIO' => 'mbi', 'MBI13_g01676_MAGBIO' => 'mbi', 'MBI14_g42955_MAGBIO' => 'mbi', 'MBI16_g13161_MAGBIO' => 'mbi', 'MBI17_g27204_MAGBIO' => 'mbi', 'MBI19_g21595_MAGBIO' => 'mbi', 'MD00G1148400' => 'mdo', 'MD02G1301200' => 'mdo', 'MD03G1227800' => 'mdo', 'MD05G1041100' => 'mdo', 'MD05G1124800' => 'mdo', 'MD05G1284000' => 'mdo', 'MD05G1338800' => 'mdo', 'MD05G1338900' => 'mdo', 'MD07G1022800' => 'mdo', 'MD10G1047500' => 'mdo', 'MD10G1127500' => 'mdo', 'MD10G1262300' => 'mdo', 'MD10G1293800' => 'mdo', 'MD16G1074300' => 'mdo', 'Medtr1g021670' => 'mtr', 'Medtr1g096320' => 'mtr', 'Medtr2g013690' => 'mtr', 'Medtr2g019450' => 'mtr', 'Medtr2g085170' => 'mtr', 'Medtr4g088785' => 'mtr', 'Medtr8g055930' => 'mtr', 'Medtr8g085850' => 'mtr', 'MELO3C002605.2' => 'cme', 'MELO3C003891.2' => 'cme', 'MELO3C004012.2' => 'cme', 'MELO3C007134.2' => 'cme', 'MELO3C008118.2' => 'cme', 'MELO3C016700.2' => 'cme', 'MELO3C024127.2' => 'cme', 'MELO3C033361.2' => 'cme', 'MELO3C033362.2' => 'cme', 'Migut.C00430' => 'egut', 'Migut.C01246' => 'egut', 'Migut.E00101' => 'egut', 'Migut.H01486' => 'egut', 'Migut.H01939' => 'egut', 'Migut.K00360' => 'egut', 'Migut.M00910' => 'egut', 'Migut.M01139' => 'egut', 'Migut.N02677' => 'egut', 'MSTRG.13252' => 'ama', 'MSTRG.14701' => 'ama', 'MSTRG.1521' => 'ama', 'MSTRG.15884' => 'ama', 'MSTRG.16242' => 'ama', 'MSTRG.22285' => 'ama', 'MSTRG.22444' => 'ama', 'MSTRG.2349' => 'ama', 'MSTRG.26308' => 'ama', 'MSTRG.28296' => 'ama', 'MSTRG.9895' => 'ama', 'Nitab4.5_0000110g0060' => 'nta', 'Nitab4.5_0000420g0130' => 'nta', 'Nitab4.5_0000422g0030' => 'nta', 'Nitab4.5_0000560g0180' => 'nta', 'Nitab4.5_0000703g0100' => 'nta', 'Nitab4.5_0000786g0200' => 'nta', 'Nitab4.5_0001336g0020' => 'nta', 'Nitab4.5_0001796g0030' => 'nta', 'Nitab4.5_0003348g0060' => 'nta', 'Nitab4.5_0003698g0040' => 'nta', 'Nitab4.5_0003942g0090' => 'nta', 'Nitab4.5_0004775g0070' => 'nta', 'Nitab4.5_0004864g0030' => 'nta', 'Nitab4.5_0005615g0020' => 'nta', 'Nitab4.5_0009288g0030' => 'nta', 'Nitab4.5_0009341g0010' => 'nta', 'Nitab4.5_0009535g0010' => 'nta', 'Nn1g03995' => 'nnu', 'Nn1g04100' => 'nnu', 'Nn1g06530' => 'nnu', 'Nn3g16404' => 'nnu', 'Nn3g17212' => 'nnu', 'Nn3g20776' => 'nnu', 'Nn3g21923' => 'nnu', 'Nn5g27737' => 'nnu', 'Nn5g29461' => 'nnu', 'Nn7g38355' => 'nnu', 'Nn8g39873' => 'nnu', 'Oeu000548.2' => 'oeu', 'Oeu004672.1' => 'oeu', 'Oeu015605.2' => 'oeu', 'Oeu016092.1' => 'oeu', 'Oeu017879.3' => 'oeu', 'Oeu024910.1' => 'oeu', 'Oeu028965.1' => 'oeu', 'Oeu031269.1' => 'oeu', 'Oeu031270.1' => 'oeu', 'Oeu032535.1' => 'oeu', 'Oeu034151.1' => 'oeu', 'Oeu034152.1' => 'oeu', 'Oeu034588.2' => 'oeu', 'Oeu050846.1' => 'oeu', 'Oeu050849.2' => 'oeu', 'Oeu051063.2' => 'oeu', 'Oeu052368.1' => 'oeu', 'Oeu052370.1' => 'oeu', 'Os01g0210400' => 'osa', 'Os01g0304300' => 'osa', 'Os01g0749100' => 'osa', 'Os02g0745800' => 'osa', 'Os03g0769050' => 'osa', 'Os05g0531500' => 'osa', 'Os06g0724300' => 'osa', 'Os11g0198100' => 'osa', 'Peaxi162Scf00069g01425' => 'pax', 'Peaxi162Scf00280g00811' => 'pax', 'Peaxi162Scf00310g00615' => 'pax', 'Peaxi162Scf00362g00542' => 'pax', 'Peaxi162Scf00461g00310' => 'pax', 'Peaxi162Scf00530g00118' => 'pax', 'Peaxi162Scf00541g00057' => 'pax', 'Peaxi162Scf00661g00017' => 'pax', 'Peaxi162Scf00926g00027' => 'pax', 'Peaxi162Scf01064g00263' => 'pax', 'Peaxi162Scf01211g00135' => 'pax', 'PGR004G2336' => 'pgr', 'PGR042G0327' => 'pgr', 'PGR042G1957' => 'pgr', 'PGR042G2003' => 'pgr', 'PGR042G3929' => 'pgr', 'PGR083G1137' => 'pgr', 'PGR083G1364' => 'pgr', 'PGSC0003DMG400003381' => 'stu', 'PGSC0003DMG400003417' => 'stu', 'PGSC0003DMG400008981' => 'stu', 'PGSC0003DMG400012417' => 'stu', 'PGSC0003DMG400012823' => 'stu', 'PGSC0003DMG400016885' => 'stu', 'PGSC0003DMG400022812' => 'stu', 'PGSC0003DMG400029726' => 'stu', 'PGSC0003DMG401009243' => 'stu', 'PGSC0003DMG401031505' => 'stu', 'PGSC0003DMG402031505' => 'stu', 'Phvul.001G017600' => 'pvu', 'Phvul.002G193500' => 'pvu', 'Phvul.002G228900' => 'pvu', 'Phvul.002G236800' => 'pvu', 'Phvul.003G049500' => 'pvu', 'Phvul.005G072000' => 'pvu', 'Phvul.006G164800' => 'pvu', 'Phvul.006G185100' => 'pvu', 'Phvul.007G090000' => 'pvu', 'Potri.001G399800' => 'ptr', 'Potri.002G149900' => 'ptr', 'Potri.004G044100' => 'ptr', 'Potri.004G177600' => 'ptr', 'Potri.009G138000' => 'ptr', 'Potri.010G094000' => 'ptr', 'Potri.011G053000' => 'ptr', 'Potri.011G119300' => 'ptr', 'Potri.013G113700' => 'ptr', 'Potri.018G107800' => 'ptr', 'Potri.019G084100' => 'ptr', 'Pp3c14_23720' => 'ppa', 'Pp3c16_6340' => 'ppa', 'Pp3c23_13420' => 'ppa', 'Pp3c24_2740' => 'ppa', 'Pp3c25_860' => 'ppa', 'Pp3c8_21750' => 'ppa', 'Prupe.1G273000' => 'ppe', 'Prupe.1G273700' => 'ppe', 'Prupe.1G274100' => 'ppe', 'Prupe.2G023300' => 'ppe', 'Prupe.4G048000' => 'ppe', 'Prupe.4G080400' => 'ppe', 'Prupe.4G181200' => 'ppe', 'Prupe.8G056900' => 'ppe', 'Prupe.8G168700' => 'ppe', 'Psat1g189080' => 'psa', 'Psat1g204760' => 'psa', 'Psat4g175560' => 'psa', 'Psat4g177720' => 'psa', 'Psat5g244240' => 'psa', 'Psat6g010720' => 'psa', 'Psat6g187200' => 'psa', 'Psat7g072040' => 'psa', 'PSO017G3501' => 'pso', 'PSO063G2148' => 'pso', 'PSO063G5608' => 'pso', 'PSO210G6392' => 'pso', 'PSO541G2319' => 'pso', 'PSO541G2836' => 'pso', 'PSO541G4012' => 'pso', 'PSO541G6253' => 'pso', 'PSO675G0580' => 'pso', 'PSO675G0856' => 'pso', 'PSO675G5635' => 'pso', 'PSO675G9157' => 'pso', 'PSO832G1660' => 'pso', 'PSO832G1969' => 'pso', 'QL02p007186' => 'qlo', 'QL02p033904' => 'qlo', 'QL03p064391' => 'qlo', 'QL05p040593' => 'qlo', 'QL05p058242' => 'qlo', 'QL08p021825' => 'qlo', 'QL11p004981' => 'qlo', 'RcHm_v2.0_Chr1g0318301' => 'rch', 'RcHm_v2.0_Chr4g0418501' => 'rch', 'RcHm_v2.0_Chr4g0439971' => 'rch', 'RcHm_v2.0_Chr5g0008541' => 'rch', 'RcHm_v2.0_Chr5g0014101' => 'rch', 'RcHm_v2.0_Chr5g0014131' => 'rch', 'RcHm_v2.0_Chr5g0033621' => 'rch', 'RcHm_v2.0_Chr6g0272041' => 'rch', 'RcHm_v2.0_Chr6g0278831' => 'rch', 'Rhsim02G0130400' => 'rsi', 'Rhsim02G0171100' => 'rsi', 'Rhsim05G0053000' => 'rsi', 'Rhsim05G0053100' => 'rsi', 'Rhsim06G0096500' => 'rsi', 'Rhsim06G0096600' => 'rsi', 'Rhsim06G0199100' => 'rsi', 'Rhsim12G0062300' => 'rsi', 'Rhsim12G0062800' => 'rsi', 'Sabra02G0118600' => 'sbr', 'Sabra04G0027300' => 'sbr', 'Sabra04G0119500' => 'sbr', 'Sabra08G0112500' => 'sbr', 'Sabra11G0036800' => 'sbr', 'Sabra11G0103800' => 'sbr', 'Sabra13G0096300' => 'sbr', 'Sabra16G0262300' => 'sbr', 'Sabra18G0091700' => 'sbr', 'Sabra19G0095400' => 'sbr', 'SalBow6G3080' => 'sbo', 'SalBow7G1157' => 'sbo', 'SalBow7G2123' => 'sbo', 'SalBow7G2285' => 'sbo', 'SalBow7G3537' => 'sbo', 'SalBow8G2947' => 'sbo', 'SalBow8G4463' => 'sbo', 'SalBow8G5466' => 'sbo', 'Sc01g0001750' => 'sci', 'Sc02g0006640' => 'sci', 'Sc02g0006670' => 'sci', 'Sc04g0008220' => 'sci', 'Sc05g0006190' => 'sci', 'Sc08g0002760' => 'sci', 'Sc17g0006170' => 'sci', 'Sc22g0002050' => 'sci', 'Sc23g0001190' => 'sci', 'Sc24g0000980' => 'sci', 'Sed0006245' => 'sed', 'Sed0007543' => 'sed', 'Sed0009411' => 'sed', 'Sed0010765' => 'sed', 'Sed0012944' => 'sed', 'Sed0014682' => 'sed', 'Sed0016174' => 'sed', 'Sed0016796' => 'sed', 'Sed0020317' => 'sed', 'Sed0021467' => 'sed', 'SEGI_01316' => 'sgi', 'SEGI_03374' => 'sgi', 'SEGI_16265' => 'sgi', 'SEGI_18569' => 'sgi', 'SEGI_20351' => 'sgi', 'SEGI_26395' => 'sgi', 'SEGI_29469' => 'sgi', 'SEGI_34771' => 'sgi', 'SEGI_36769' => 'sgi', 'SEGI_37139' => 'sgi', 'SGA_v2.0_scaffold100G29687' => 'sas', 'SGA_v2.0_scaffold118G32472' => 'sas', 'SGA_v2.0_scaffold14G07051' => 'sas', 'SGA_v2.0_scaffold183G39845' => 'sas', 'SGA_v2.0_scaffold1G00174' => 'sas', 'SGA_v2.0_scaffold22G09714' => 'sas', 'SGA_v2.0_scaffold333G48992' => 'sas', 'SGA_v2.0_scaffold46G17491' => 'sas', 'SGA_v2.0_scaffold49G18294' => 'sas', 'SGA_v2.0_scaffold63G21658' => 'sas', 'SHI01741' => 'shi', 'SHI05771' => 'shi', 'SHI18077' => 'shi', 'SHI20525' => 'shi', 'SHI20527' => 'shi', 'SHI20528' => 'shi', 'SMO172G0185' => 'smo', 'SMO198G0020' => 'smo', 'SMO351G0006' => 'smo', 'SMO356G0118' => 'smo', 'SMO358G0296' => 'smo', 'SMO367G0079' => 'smo', 'SMO367G1277' => 'smo', 'Solyc01g014220.3' => 'sly', 'Solyc01g111770.2' => 'sly', 'Solyc02g078180.3' => 'sly', 'Solyc03g006430.3' => 'sly', 'Solyc03g006456.1' => 'sly', 'Solyc03g079860.2' => 'sly', 'Solyc04g079770.3' => 'sly', 'Solyc05g007430.4' => 'sly', 'Solyc07g063150.3' => 'sly', 'Solyc08g016620.3' => 'sly', 'Solyc09g057590.3' => 'sly', 'Solyc09g057600.1' => 'sly', 'Solyc10g009050.3' => 'sly', 'Solyc11g017420.2' => 'sly', 'Sopen01g053810' => 'spe', 'Sopen02g023040' => 'spe', 'Sopen03g002440' => 'spe', 'Sopen04g033350' => 'spe', 'Sopen05g003310' => 'spe', 'Sopen07g004050' => 'spe', 'Sopen07g031340' => 'spe', 'Sopen08g006990' => 'spe', 'Sopen10g004830' => 'spe', 'Sopen11g009370' => 'spe', 'Sp1g24450' => 'spa', 'Sp1g29670' => 'spa', 'Sp1g39600' => 'spa', 'Sp2g11080' => 'spa', 'Sp2g13970' => 'spa', 'Sp4g16130' => 'spa', 'Sp6g13080' => 'spa', 'Sp7g37270' => 'spa', 'TAR371G0065' => 'tar', 'TAR376G0340' => 'tar', 'TAR376G0435' => 'tar', 'TAR381G0002' => 'tar', 'TAR381G1236' => 'tar', 'TAR624G0055' => 'tar', 'TAR624G0324' => 'tar', 'TAR624G0696' => 'tar', 'TAR624G0906' => 'tar', 'TAR625G0107' => 'tar', 'TAR626G0015' => 'tar', 'TAR626G1356' => 'tar', 'TAR627G0888' => 'tar', 'TAR628G0399' => 'tar', 'TAR628G1327' => 'tar', 'TAR629G2831' => 'tar', 'TAR629G2874' => 'tar', 'TAR633G1432' => 'tar', 'TAR633G2771' => 'tar', 'THA.LOC104803394' => 'tha', 'THA.LOC104805153' => 'tha', 'THA.LOC104806784' => 'tha', 'THA.LOC104810473' => 'tha', 'THA.LOC104813100' => 'tha', 'THA.LOC104814215' => 'tha', 'THA.LOC104815554' => 'tha', 'THA.LOC104820544' => 'tha', 'THA.LOC104824754' => 'tha', 'THA.LOC104827717' => 'tha', 'Thecc.02G031400' => 'tca', 'Thecc.02G055900' => 'tca', 'Thecc.02G350800' => 'tca', 'Thecc.06G150900' => 'tca', 'Thecc.06G186600' => 'tca', 'Thecc.07G089600' => 'tca', 'Thecc.08G020400' => 'tca', 'Thecc.08G182100' => 'tca', 'Thhalv10000873m.g' => 'esa', 'Thhalv10004185m.g' => 'esa', 'Thhalv10006981m.g' => 'esa', 'Thhalv10007204m.g' => 'esa', 'Thhalv10011374m.g' => 'esa', 'Thhalv10013482m.g' => 'esa', 'Thhalv10017801m.g' => 'esa', 'Thhalv10024983m.g' => 'esa', 'TPR.G12072' => 'tpr', 'TPR.G15769' => 'tpr', 'TPR.G16504' => 'tpr', 'TPR.G16506' => 'tpr', 'TPR.G24345' => 'tpr', 'TPR.G26666' => 'tpr', 'TPR.G27320' => 'tpr', 'TPR.G31819' => 'tpr', 'TPR.G38879' => 'tpr', 'TPR.G39015' => 'tpr', 'TPR.G8819' => 'tpr', 'TWI09G0924' => 'twi', 'TWI12G0811' => 'twi', 'TWI12G1294' => 'twi', 'TWI31G0150' => 'twi', 'TWI36G1262' => 'twi', 'TWI38G1287' => 'twi', 'TWI38G1633' => 'twi', 'TWI38G1982' => 'twi', 'TWI39G0116' => 'twi', 'TWI60G1011' => 'twi', 'TWI63G0171' => 'twi', 'TWI73G0839' => 'twi', 'TWI79G1511' => 'twi', 'unitig_0.g915' => 'ugi', 'unitig_0.g916' => 'ugi', 'unitig_21.g20219' => 'ugi', 'unitig_21.g20416' => 'ugi', 'unitig_578.g16132' => 'ugi', 'unitig_578.g16718' => 'ugi', 'unitig_62.g23481' => 'ugi', 'unitig_744.g24535' => 'ugi', 'unitig_749.g13525' => 'ugi', 'vmacro01248' => 'vma', 'vmacro02290' => 'vma', 'vmacro10946' => 'vma', 'vmacro11865' => 'vma', 'vmacro12493' => 'vma', 'vmacro17322' => 'vma', 'vmacro21599' => 'vma', 'vmacro23041' => 'vma', 'VMungo0251G0004' => 'vmu', 'VMungo0251G2639' => 'vmu', 'VMungo0251G2967' => 'vmu', 'VMungo0540G0864' => 'vmu', 'VMungo0540G1569' => 'vmu', 'VMungo0647G0317' => 'vmu', 'VMungo0720G1373' => 'vmu', 'VMungo0720G1508' => 'vmu', 'VMungo1080G0485' => 'vmu', 'VMungo1215G3177' => 'vmu', 'Zm00001eb112600' => 'zma', 'Zm00001eb120220' => 'zma', 'Zm00001eb153240' => 'zma', 'Zm00001eb168880' => 'zma', 'Zm00001eb213920' => 'zma', 'Zm00001eb228280' => 'zma', 'Zm00001eb254580' => 'zma', 'Zm00001eb272180' => 'zma', 'Zm00001eb293190' => 'zma', 'Zm00001eb322930' => 'zma', 'Zm00001eb353360' => 'zma', 'Zm00001eb353390' => 'zma', 'Zm00001eb353430' => 'zma', 'Zm00001eb353440' => 'zma', 'Zm00001eb353780' => 'zma' ), 'gf_id' => 'HOM05D000499', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000499' ), 'data_identifier' => 'HOM05D000499', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000499', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1066', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p29780' => 'bna', 'A02p33180' => 'bna', 'A03p16470' => 'bna', 'A03p66010' => 'bna', 'A04p25970' => 'bna', 'A06p01270' => 'bna', 'A06p46080' => 'bna', 'A07p11400' => 'bna', 'A08p01840' => 'bna', 'A08p08230' => 'bna', 'A08p25740' => 'bna', 'A09p32070' => 'bna', 'A09p37830' => 'bna', 'A09p42840' => 'bna', 'A09p42850' => 'bna', 'Aa31LG10G2060' => 'aar', 'Aa31LG2G7410' => 'aar', 'Aa31LG6G10200' => 'aar', 'Aa31LG6G16680' => 'aar', 'Aa31LG6G8470' => 'aar', 'Aa31LG9G12730' => 'aar', 'Aa31LG9G13680' => 'aar', 'Aa31LG9G14920' => 'aar', 'Aa31LG9G6650' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4977' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5467' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3254' => 'aag', 'Actinidia02578' => 'ach', 'Actinidia07693' => 'ach', 'Actinidia08413' => 'ach', 'Actinidia08414' => 'ach', 'Actinidia15289' => 'ach', 'Actinidia19871' => 'ach', 'Actinidia21475' => 'ach', 'Actinidia22576' => 'ach', 'Actinidia28327' => 'ach', 'Actinidia32491' => 'ach', 'Actinidia39463' => 'ach', 'Actinidia39571' => 'ach', 'Ah.01g013750' => 'amhyb', 'Ah.01g023210' => 'amhyb', 'Ah.04g164850' => 'amhyb', 'Ah.05g178060' => 'amhyb', 'Ah.07g204270' => 'amhyb', 'Ah.07g208480' => 'amhyb', 'Ah.09g237410' => 'amhyb', 'Ah.14g089460' => 'amhyb', 'AL1G41790' => 'aly', 'AL1G49050' => 'aly', 'AL1G53810' => 'aly', 'AL1G61400' => 'aly', 'AL4G18580' => 'aly', 'AL5G12510' => 'aly', 'AL5G12540' => 'aly', 'AL6G43230' => 'aly', 'AL7G10370' => 'aly', 'AL7G19250' => 'aly', 'AL8G12240' => 'aly', 'AL8G18540' => 'aly', 'Aqoxy1G02409' => 'aox', 'Aqoxy2G03993' => 'aox', 'Aqoxy3G03357' => 'aox', 'Aqoxy4G00785' => 'aox', 'Aqoxy5G02598' => 'aox', 'Aqoxy6G00132' => 'aox', 'Aqoxy7G01776' => 'aox', 'Aqoxy7G02316' => 'aox', 'Aqoxy7G03973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.12AFKW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B8730' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27IQR1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3F75VG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3RE0GA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41TCQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.527VTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FIR39' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5W8UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DA38EV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ63HS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H1I32C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HC27T5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4M8AP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7N3CZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9UVDZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LS1NQA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT1D4B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SKC4TM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCFV76' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF9Q1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQWD9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1ZM88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WE07RT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YCK7VH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJE6Q6' => 'arhy', 'AT1G28240' => 'ath', 'AT1G34550' => 'ath', 'AT1G53040' => 'ath', 'AT2G02910' => 'ath', 'AT4G09630' => 'ath', 'AT4G38500' => 'ath', 'AT5G42660' => 'ath', 'AT5G46220' => 'ath', 'ATR0152G026' => 'atr', 'ATR0564G343' => 'atr', 'ATR0706G151' => 'atr', 'ATR0733G207' => 'atr', 'ATR0751G234' => 'atr', 'ATR0807G048' => 'atr', 'ATR1091G084' => 'atr', 'Atru.chr10.1229' => 'acertr', 'Atru.chr10.1230' => 'acertr', 'Atru.chr10.1874' => 'acertr', 'Atru.chr11.1808' => 'acertr', 'Atru.chr13.1795' => 'acertr', 'Atru.chr13.570' => 'acertr', 'Atru.chr2.2608' => 'acertr', 'Atru.chr2.2609' => 'acertr', 'Atru.chr5.3428' => 'acertr', 'Atru.chr8.1171' => 'acertr', 'AUR62004651' => 'cqu', 'AUR62008675' => 'cqu', 'AUR62010014' => 'cqu', 'AUR62013004' => 'cqu', 'AUR62014825' => 'cqu', 'AUR62015015' => 'cqu', 'AUR62015151' => 'cqu', 'AUR62017020' => 'cqu', 'AUR62019422' => 'cqu', 'AUR62023570' => 'cqu', 'AUR62025571' => 'cqu', 'AUR62029098' => 'cqu', 'AUR62033863' => 'cqu', 'AUR62034296' => 'cqu', 'AUR62040075' => 'cqu', 'BcaB02g07334' => 'bca', 'BcaB02g10575' => 'bca', 'BcaB03g12119' => 'bca', 'BcaB03g12120' => 'bca', 'BcaB03g13945' => 'bca', 'BcaB04g17123' => 'bca', 'BcaB04g17867' => 'bca', 'BcaB04g19839' => 'bca', 'BcaB07g30317' => 'bca', 'BcaB07g32432' => 'bca', 'BcaB07g33362' => 'bca', 'BcaB08g36611' => 'bca', 'BcaC01g00028' => 'bca', 'BcaC01g01356' => 'bca', 'BcaC01g02034' => 'bca', 'BcaC01g06051' => 'bca', 'BcaC03g16839' => 'bca', 'BcaC03g17176' => 'bca', 'BcaC05g26829' => 'bca', 'BcaC06g31490' => 'bca', 'BcaC06g35344' => 'bca', 'BcaC06g36570' => 'bca', 'BcaC07g37537' => 'bca', 'BcaC08g43491' => 'bca', 'BcaC08g43773' => 'bca', 'BcaNung00234' => 'bca', 'BcaNung01982' => 'bca', 'BcaNung03707' => 'bca', 'BcaNung06454' => 'bca', 'BolC2t10762H' => 'bol', 'BolC2t11191H' => 'bol', 'BolC3t14322H' => 'bol', 'BolC3t19747H' => 'bol', 'BolC3t21425H' => 'bol', 'BolC4t27800H' => 'bol', 'BolC5t31423H' => 'bol', 'BolC6t35951H' => 'bol', 'BolC6t36282H' => 'bol', 'BolC7t40678H' => 'bol', 'BolC7t40679H' => 'bol', 'BolC7t42222H' => 'bol', 'BolC7t43492H' => 'bol', 'BolC7t46785H' => 'bol', 'BolC8t47853H' => 'bol', 'BolC9t56805H' => 'bol', 'BraA02t08000Z' => 'bra', 'BraA02t08341Z' => 'bra', 'BraA03t10936Z' => 'bra', 'BraA03t15657Z' => 'bra', 'BraA04t18100Z' => 'bra', 'BraA05t20523Z' => 'bra', 'BraA06t23353Z' => 'bra', 'BraA06t27473Z' => 'bra', 'BraA06t27769Z' => 'bra', 'BraA07t28928Z' => 'bra', 'BraA08t32236Z' => 'bra', 'BraA08t32841Z' => 'bra', 'BraA08t34524Z' => 'bra', 'BraA09t38742Z' => 'bra', 'BraA09t39295Z' => 'bra', 'C02p47180' => 'bna', 'C02p50990' => 'bna', 'C03p19360' => 'bna', 'C03p74950' => 'bna', 'C03p91000' => 'bna', 'C04p63260' => 'bna', 'C05p27050' => 'bna', 'C06p08750' => 'bna', 'C06p11490' => 'bna', 'C07p02820' => 'bna', 'C07p17180' => 'bna', 'C07p29440' => 'bna', 'C07p63730' => 'bna', 'C09p39260' => 'bna', 'CAN.G1164.34' => 'can', 'CAN.G1164.39' => 'can', 'CAN.G1530.3' => 'can', 'CAN.G162.61' => 'can', 'CAN.G176.6' => 'can', 'CAN.G289.49' => 'can', 'CAN.G370.21' => 'can', 'CAN.G370.22' => 'can', 'CAN.G371.117' => 'can', 'CAN.G58.37' => 'can', 'CAN.G588.98' => 'can', 'CANSAT21G2266' => 'cansat', 'CANSAT25G2799' => 'cansat', 'CANSAT35G0862' => 'cansat', 'CANSAT35G1704' => 'cansat', 'CANSAT35G1760' => 'cansat', 'CANSAT56G3971' => 'cansat', 'CANSAT56G4116' => 'cansat', 'CANSAT80G1259' => 'cansat', 'CARHR027730' => 'chi', 'CARHR033880' => 'chi', 'CARHR043270' => 'chi', 'CARHR145330' => 'chi', 'CARHR145340' => 'chi', 'CARHR175570' => 'chi', 'CARHR181570' => 'chi', 'CARHR258470' => 'chi', 'CARHR260490' => 'chi', 'CARHR294220' => 'chi', 'Carub.0001s2668' => 'cru', 'Carub.0001s3257' => 'cru', 'Carub.0001s4220' => 'cru', 'Carub.0005s0179' => 'cru', 'Carub.0006s2807' => 'cru', 'Carub.0007s0039' => 'cru', 'Carub.0008s0169' => 'cru', 'Carub.0008s0636' => 'cru', 'Ca_00338_v3' => 'car', 'Ca_00542_v3' => 'car', 'Ca_01844_v3' => 'car', 'Ca_10611_v3' => 'car', 'Ca_13326_v3' => 'car', 'Ca_17944_v3' => 'car', 'Ca_18546_v3' => 'car', 'Ca_24219_v3' => 'car', 'Ca_29972_v3' => 'car', 'CBR_g3681' => 'cbr', 'CBR_g40021' => 'cbr', 'Cc01_g08140' => 'ccan', 'Cc02_g13410' => 'ccan', 'Cc02_g37480' => 'ccan', 'Cc05_g12030' => 'ccan', 'Cc09_g03370' => 'ccan', 'Cc09_g10300' => 'ccan', 'Cc10_g03530' => 'ccan', 'Cc10_g11380' => 'ccan', 'CDE01G0176' => 'cde', 'CDE02G0675' => 'cde', 'CDE02G0942' => 'cde', 'CDE02G1153' => 'cde', 'CDE02G4177' => 'cde', 'CDE04G2117' => 'cde', 'CDE04G2736' => 'cde', 'CDE08G1161' => 'cde', 'CDE09G1238' => 'cde', 'Cfa000467' => 'cfa', 'Cfa000947' => 'cfa', 'Cfa004969' => 'cfa', 'Cfa005284' => 'cfa', 'Cfa008993' => 'cfa', 'Cfa018187' => 'cfa', 'Cfa018454' => 'cfa', 'Cfa020585' => 'cfa', 'Ciclev10000424m.g' => 'ccl', 'Ciclev10003605m.g' => 'ccl', 'Ciclev10007828m.g' => 'ccl', 'Ciclev10014620m.g' => 'ccl', 'Ciclev10015169m.g' => 'ccl', 'Ciclev10018291m.g' => 'ccl', 'Ciclev10028256m.g' => 'ccl', 'Ciclev10033822m.g' => 'ccl', 'CiPaw.05G060300' => 'cil', 'CiPaw.05G085000' => 'cil', 'CiPaw.06G083700' => 'cil', 'CiPaw.06G120300' => 'cil', 'CiPaw.09G060500' => 'cil', 'CiPaw.09G123800' => 'cil', 'CiPaw.11G169700' => 'cil', 'CiPaw.12G118300' => 'cil', 'CiPaw.15G071000' => 'cil', 'CiPaw.15G081900' => 'cil', 'ClCG01G024610' => 'cla', 'ClCG03G006070' => 'cla', 'ClCG05G019250' => 'cla', 'ClCG09G009500' => 'cla', 'ClCG11G008200' => 'cla', 'ClCG11G018080' => 'cla', 'COL.COLO4_17373' => 'col', 'COL.COLO4_22994' => 'col', 'COL.COLO4_26389' => 'col', 'COL.COLO4_27170' => 'col', 'COL.COLO4_31074' => 'col', 'COL.COLO4_31465' => 'col', 'COL.COLO4_36438' => 'col', 'COL.COLO4_36439' => 'col', 'Cpa.g.c38781' => 'cpa', 'Cpa.g.sc128.12' => 'cpa', 'Cpa.g.sc166.7' => 'cpa', 'Cpa.g.sc166.8' => 'cpa', 'Cpa.g.sc20.111' => 'cpa', 'Cpa.g.sc27.31' => 'cpa', 'Cpa.g.sc64.36' => 'cpa', 'Cpa.g.sc64.37' => 'cpa', 'Cpa.g.sc66.49' => 'cpa', 'Cpa.g.sc80.64' => 'cpa', 'CsaV3_1G012320' => 'csa', 'CsaV3_2G008480' => 'csa', 'CsaV3_2G033450' => 'csa', 'CsaV3_3G044830' => 'csa', 'CsaV3_4G033710' => 'csa', 'CsaV3_6G051730' => 'csa', 'CsaV3_7G025350' => 'csa', 'CSS0001067' => 'camsi', 'CSS0005996' => 'camsi', 'CSS0006590' => 'camsi', 'CSS0009673' => 'camsi', 'CSS0010201' => 'camsi', 'CSS0010549' => 'camsi', 'CSS0011364' => 'camsi', 'CSS0014473' => 'camsi', 'CSS0014961' => 'camsi', 'CSS0020191' => 'camsi', 'CSS0021165' => 'camsi', 'CSS0022306' => 'camsi', 'CSS0030591' => 'camsi', 'CSS0030696' => 'camsi', 'CSS0032653' => 'camsi', 'CSS0037487' => 'camsi', 'CSS0041102' => 'camsi', 'CSS0041261' => 'camsi', 'CSS0046246' => 'camsi', 'CSS0049256' => 'camsi', 'DCAR_004075' => 'dca', 'DCAR_011538' => 'dca', 'DCAR_019553' => 'dca', 'DCAR_020952' => 'dca', 'DCAR_021739' => 'dca', 'DCAR_027407' => 'dca', 'DCAR_027913' => 'dca', 'DCAR_028066' => 'dca', 'Dinv05899' => 'din', 'Dinv07563' => 'din', 'Dinv08010' => 'din', 'Dinv14125' => 'din', 'Dinv20172' => 'din', 'Dinv30743' => 'din', 'Dinv31229' => 'din', 'Dinv34162' => 'din', 'Dinv36028' => 'din', 'Dinv39368' => 'din', 'Dinv40565' => 'din', 'Dinv41706' => 'din', 'Duzib052G0089' => 'dzi', 'Duzib116G0641' => 'dzi', 'Duzib132G0069' => 'dzi', 'Duzib132G1219' => 'dzi', 'Duzib147G0278' => 'dzi', 'Duzib160G0480' => 'dzi', 'Duzib170G0661' => 'dzi', 'Duzib177G0591' => 'dzi', 'Duzib187G1353' => 'dzi', 'Duzib192G0858' => 'dzi', 'Duzib192G0883' => 'dzi', 'Duzib213G0506' => 'dzi', 'Duzib235G0289' => 'dzi', 'Duzib251G0422' => 'dzi', 'ECA232G3898' => 'eca', 'ECA233G5950' => 'eca', 'ECA234G1699' => 'eca', 'ECA234G2421' => 'eca', 'ECA236G0426' => 'eca', 'ECA236G4331' => 'eca', 'ECA248G2573' => 'eca', 'EL10Ac1g00077' => 'bvu', 'EL10Ac1g01746' => 'bvu', 'EL10Ac2g03464' => 'bvu', 'EL10Ac4g08176' => 'bvu', 'EL10Ac7g17521' => 'bvu', 'EL10Ac8g20386' => 'bvu', 'EL10Ac9g21343' => 'bvu', 'EL10Ac9g22688' => 'bvu', 'Eucgr.B03434' => 'egr', 'Eucgr.D00618' => 'egr', 'Eucgr.E02395' => 'egr', 'Eucgr.F01129' => 'egr', 'Eucgr.F02622' => 'egr', 'Eucgr.F04207' => 'egr', 'FAN01G0570' => 'fan', 'FAN03G3351' => 'fan', 'FAN06G3702' => 'fan', 'FAN07G2149' => 'fan', 'FAN10G3758' => 'fan', 'FAN11G1170' => 'fan', 'FAN11G2050' => 'fan', 'FAN11G2724' => 'fan', 'FAN12G1700' => 'fan', 'FAN12G2028' => 'fan', 'FAN15G1160' => 'fan', 'FAN15G3063' => 'fan', 'FAN16G2540' => 'fan', 'FAN16G3077' => 'fan', 'FAN16G3624' => 'fan', 'FAN17G0221' => 'fan', 'FAN20G2492' => 'fan', 'FAN20G2905' => 'fan', 'FAN21G0548' => 'fan', 'FAN21G1300' => 'fan', 'FAN22G0077' => 'fan', 'FAN22G1315' => 'fan', 'FAN24G1280' => 'fan', 'FAN24G1445' => 'fan', 'FAN24G3527' => 'fan', 'FAN25G0464' => 'fan', 'FAN25G2885' => 'fan', 'FAN25G3270' => 'fan', 'FAN27G1101' => 'fan', 'FAN27G2846' => 'fan', 'FAN27G3524' => 'fan', 'FvH4_2g11770' => 'fve', 'FvH4_2g15630' => 'fve', 'FvH4_3g05570' => 'fve', 'FvH4_3g09110' => 'fve', 'FvH4_3g19940' => 'fve', 'FvH4_4g04821' => 'fve', 'FvH4_4g31480' => 'fve', 'FvH4_7g01740' => 'fve', 'Glyma.05G130400' => 'gma', 'Glyma.05G156400' => 'gma', 'Glyma.07G197000' => 'gma', 'Glyma.08G085151' => 'gma', 'Glyma.08G114500' => 'gma', 'Glyma.08G300400' => 'gma', 'Glyma.10G215800' => 'gma', 'Glyma.12G224400' => 'gma', 'Glyma.13G179300' => 'gma', 'Glyma.13G218151' => 'gma', 'Glyma.13G238800' => 'gma', 'Glyma.13G276900' => 'gma', 'Glyma.14G078200' => 'gma', 'Glyma.15G074500' => 'gma', 'Glyma.15G094100' => 'gma', 'Glyma.17G247200' => 'gma', 'Glyma.18G120100' => 'gma', 'Glyma.20G176000' => 'gma', 'Gohir.A01G063600' => 'ghi', 'Gohir.A01G170301' => 'ghi', 'Gohir.A02G060500' => 'ghi', 'Gohir.A05G133850' => 'ghi', 'Gohir.A05G161400' => 'ghi', 'Gohir.A06G012900' => 'ghi', 'Gohir.A06G035901' => 'ghi', 'Gohir.A06G127100' => 'ghi', 'Gohir.A06G210500' => 'ghi', 'Gohir.A08G008650' => 'ghi', 'Gohir.A09G072700' => 'ghi', 'Gohir.A09G088301' => 'ghi', 'Gohir.A10G040600' => 'ghi', 'Gohir.A12G036300' => 'ghi', 'Gohir.A12G143350' => 'ghi', 'Gohir.A12G165500' => 'ghi', 'Gohir.A13G145700' => 'ghi', 'Gohir.D01G050000' => 'ghi', 'Gohir.D01G051366' => 'ghi', 'Gohir.D01G161350' => 'ghi', 'Gohir.D02G065900' => 'ghi', 'Gohir.D05G164200' => 'ghi', 'Gohir.D05G355500' => 'ghi', 'Gohir.D06G010400' => 'ghi', 'Gohir.D06G111250' => 'ghi', 'Gohir.D06G132000' => 'ghi', 'Gohir.D06G210500' => 'ghi', 'Gohir.D07G165675' => 'ghi', 'Gohir.D08G062240' => 'ghi', 'Gohir.D08G086101' => 'ghi', 'Gohir.D08G138060' => 'ghi', 'Gohir.D09G072300' => 'ghi', 'Gohir.D10G041400' => 'ghi', 'Gohir.D11G191020' => 'ghi', 'Gohir.D11G212066' => 'ghi', 'Gohir.D12G036300' => 'ghi', 'Gohir.D12G168600' => 'ghi', 'Gohir.D13G150600' => 'ghi', 'Gorai.001G057300' => 'gra', 'Gorai.002G069900' => 'gra', 'Gorai.002G200000' => 'gra', 'Gorai.003G067600' => 'gra', 'Gorai.005G074800' => 'gra', 'Gorai.006G087300' => 'gra', 'Gorai.008G037500' => 'gra', 'Gorai.008G181400' => 'gra', 'Gorai.009G169400' => 'gra', 'Gorai.009G387900' => 'gra', 'Gorai.010G013300' => 'gra', 'Gorai.010G153800' => 'gra', 'Gorai.010G255800' => 'gra', 'Gorai.011G043700' => 'gra', 'Gorai.011G198900' => 'gra', 'Gorai.013G168400' => 'gra', 'GSVIVG01005212001' => 'vvi', 'GSVIVG01006163001' => 'vvi', 'GSVIVG01009625001' => 'vvi', 'GSVIVG01014338001' => 'vvi', 'GSVIVG01020005001' => 'vvi', 'GSVIVG01021450001' => 'vvi', 'GSVIVG01023975001' => 'vvi', 'GSVIVG01034490001' => 'vvi', 'HanXRQChr04g0112071' => 'han', 'HanXRQChr05g0131151' => 'han', 'HanXRQChr09g0262371' => 'han', 'HanXRQChr09g0268401' => 'han', 'HanXRQChr10g0279241' => 'han', 'HanXRQChr10g0297961' => 'han', 'HanXRQChr11g0326231' => 'han', 'HanXRQChr11g0328471' => 'han', 'HanXRQChr16g0507941' => 'han', 'HanXRQChr17g0560211' => 'han', 'Haze_02108' => 'cav', 'Haze_02428' => 'cav', 'Haze_05593' => 'cav', 'Haze_06448' => 'cav', 'Haze_09427' => 'cav', 'Haze_12022' => 'cav', 'Haze_17612' => 'cav', 'Haze_17928' => 'cav', 'Hma1.2p1_0032F.1_g019250' => 'hma', 'Hma1.2p1_0163F.1_g072690' => 'hma', 'Hma1.2p1_0265F.1_g106710' => 'hma', 'Hma1.2p1_0286F.1_g113970' => 'hma', 'Hma1.2p1_0363F.1_g136640' => 'hma', 'Hma1.2p1_0584F.1_g183470' => 'hma', 'Hma1.2p1_0885F.1_g232570' => 'hma', 'HPP92_006022' => 'vpl', 'HPP92_007320' => 'vpl', 'HPP92_011521' => 'vpl', 'HPP92_019387' => 'vpl', 'HPP92_024038' => 'vpl', 'Hund05891' => 'sun', 'Hund06450' => 'sun', 'Hund12053' => 'sun', 'Hund16800' => 'sun', 'Hund21222' => 'sun', 'Hund22896' => 'sun', 'Hund23746' => 'sun', 'Hund27083' => 'sun', 'Lalb_Chr02g0141831' => 'lal', 'Lalb_Chr02g0141841' => 'lal', 'Lalb_Chr05g0220411' => 'lal', 'Lalb_Chr06g0162081' => 'lal', 'Lalb_Chr09g0327651' => 'lal', 'Lalb_Chr13g0295051' => 'lal', 'Lalb_Chr15g0086801' => 'lal', 'Lalb_Chr16g0383781' => 'lal', 'Lalb_Chr16g0383791' => 'lal', 'Lalb_Chr18g0055441' => 'lal', 'Lalb_Chr18g0059611' => 'lal', 'Lalb_Chr20g0109661' => 'lal', 'Lalb_Chr20g0109831' => 'lal', 'Lalb_Chr20g0121871' => 'lal', 'Lalb_Chr22g0355361' => 'lal', 'Lalb_Chr25g0286371' => 'lal', 'Lj1A1187G43' => 'lonja', 'Lj1A1205T50' => 'lonja', 'Lj1A800G33' => 'lonja', 'Lj1C1187T7' => 'lonja', 'Lj1C843T11' => 'lonja', 'Lj1g0010940' => 'lja', 'Lj2A288T69' => 'lonja', 'Lj3g0024276' => 'lja', 'Lj4A47T76' => 'lonja', 'Lj4g0005805' => 'lja', 'Lj4g0006097' => 'lja', 'Lj4g0008528' => 'lja', 'Lj4g0024907' => 'lja', 'Lj5g0012472' => 'lja', 'Lj5g0018648' => 'lja', 'Lj6C789G1' => 'lonja', 'Lj6g0004000' => 'lja', 'Lj7A292G67' => 'lonja', 'Lj7A292T64' => 'lonja', 'Lj9A400T58' => 'lonja', 'Lsat_1_v5_gn_1_126181' => 'lsa', 'Lsat_1_v5_gn_4_123041' => 'lsa', 'Lsat_1_v5_gn_4_133620' => 'lsa', 'Lsat_1_v5_gn_4_53221' => 'lsa', 'Lsat_1_v5_gn_4_71961' => 'lsa', 'Lsat_1_v5_gn_7_105241' => 'lsa', 'Lsat_1_v5_gn_7_21361' => 'lsa', 'Lsat_1_v5_gn_7_28860' => 'lsa', 'Lsat_1_v5_gn_7_31260' => 'lsa', 'Lsat_1_v5_gn_8_52801' => 'lsa', 'Manes.02G191400' => 'mes', 'Manes.03G110100' => 'mes', 'Manes.04G071100' => 'mes', 'Manes.05G100500' => 'mes', 'Manes.05G164700' => 'mes', 'Manes.15G087000' => 'mes', 'Manes.15G121500' => 'mes', 'Manes.16G028300' => 'mes', 'Manes.17G046100' => 'mes', 'Manes.17G069800' => 'mes', 'Manes.18G100500' => 'mes', 'Mapoly0002s0109' => 'mpo', 'Mapoly0024s0007' => 'mpo', 'Mapoly0089s0032' => 'mpo', 'MBI04_g42241_MAGBIO' => 'mbi', 'MBI05_g11988_MAGBIO' => 'mbi', 'MBI05_g35452_MAGBIO' => 'mbi', 'MBI07_g30179_MAGBIO' => 'mbi', 'MBI07_g35859_MAGBIO' => 'mbi', 'MBI07_g35860_MAGBIO' => 'mbi', 'MBI07_g37166_MAGBIO' => 'mbi', 'MBI08_g18172_MAGBIO' => 'mbi', 'MBI09_g08441_MAGBIO' => 'mbi', 'MBI13_g01676_MAGBIO' => 'mbi', 'MBI14_g42955_MAGBIO' => 'mbi', 'MBI16_g13161_MAGBIO' => 'mbi', 'MBI17_g27204_MAGBIO' => 'mbi', 'MBI19_g21595_MAGBIO' => 'mbi', 'MD00G1148400' => 'mdo', 'MD02G1301200' => 'mdo', 'MD03G1227800' => 'mdo', 'MD05G1041100' => 'mdo', 'MD05G1124800' => 'mdo', 'MD05G1284000' => 'mdo', 'MD05G1338800' => 'mdo', 'MD05G1338900' => 'mdo', 'MD07G1022800' => 'mdo', 'MD10G1047500' => 'mdo', 'MD10G1127500' => 'mdo', 'MD10G1262300' => 'mdo', 'MD10G1293800' => 'mdo', 'MD16G1074300' => 'mdo', 'Medtr1g021670' => 'mtr', 'Medtr1g096320' => 'mtr', 'Medtr2g013690' => 'mtr', 'Medtr2g019450' => 'mtr', 'Medtr2g085170' => 'mtr', 'Medtr4g088785' => 'mtr', 'Medtr8g055930' => 'mtr', 'Medtr8g085850' => 'mtr', 'MELO3C002605.2' => 'cme', 'MELO3C003891.2' => 'cme', 'MELO3C004012.2' => 'cme', 'MELO3C007134.2' => 'cme', 'MELO3C008118.2' => 'cme', 'MELO3C016700.2' => 'cme', 'MELO3C024127.2' => 'cme', 'MELO3C033361.2' => 'cme', 'MELO3C033362.2' => 'cme', 'Migut.C00430' => 'egut', 'Migut.C01246' => 'egut', 'Migut.E00101' => 'egut', 'Migut.H01486' => 'egut', 'Migut.H01939' => 'egut', 'Migut.K00360' => 'egut', 'Migut.M00910' => 'egut', 'Migut.M01139' => 'egut', 'Migut.N02677' => 'egut', 'MSTRG.13252' => 'ama', 'MSTRG.14701' => 'ama', 'MSTRG.1521' => 'ama', 'MSTRG.15884' => 'ama', 'MSTRG.16242' => 'ama', 'MSTRG.22285' => 'ama', 'MSTRG.22444' => 'ama', 'MSTRG.2349' => 'ama', 'MSTRG.26308' => 'ama', 'MSTRG.28296' => 'ama', 'MSTRG.9895' => 'ama', 'Nitab4.5_0000110g0060' => 'nta', 'Nitab4.5_0000420g0130' => 'nta', 'Nitab4.5_0000422g0030' => 'nta', 'Nitab4.5_0000560g0180' => 'nta', 'Nitab4.5_0000703g0100' => 'nta', 'Nitab4.5_0000786g0200' => 'nta', 'Nitab4.5_0001336g0020' => 'nta', 'Nitab4.5_0001796g0030' => 'nta', 'Nitab4.5_0003348g0060' => 'nta', 'Nitab4.5_0003698g0040' => 'nta', 'Nitab4.5_0003942g0090' => 'nta', 'Nitab4.5_0004775g0070' => 'nta', 'Nitab4.5_0004864g0030' => 'nta', 'Nitab4.5_0005615g0020' => 'nta', 'Nitab4.5_0009288g0030' => 'nta', 'Nitab4.5_0009341g0010' => 'nta', 'Nitab4.5_0009535g0010' => 'nta', 'Nn1g03995' => 'nnu', 'Nn1g04100' => 'nnu', 'Nn1g06530' => 'nnu', 'Nn3g16404' => 'nnu', 'Nn3g17212' => 'nnu', 'Nn3g20776' => 'nnu', 'Nn3g21923' => 'nnu', 'Nn5g27737' => 'nnu', 'Nn5g29461' => 'nnu', 'Nn7g38355' => 'nnu', 'Nn8g39873' => 'nnu', 'Oeu000548.2' => 'oeu', 'Oeu004672.1' => 'oeu', 'Oeu015605.2' => 'oeu', 'Oeu016092.1' => 'oeu', 'Oeu017879.3' => 'oeu', 'Oeu024910.1' => 'oeu', 'Oeu028965.1' => 'oeu', 'Oeu031269.1' => 'oeu', 'Oeu031270.1' => 'oeu', 'Oeu032535.1' => 'oeu', 'Oeu034151.1' => 'oeu', 'Oeu034152.1' => 'oeu', 'Oeu034588.2' => 'oeu', 'Oeu050846.1' => 'oeu', 'Oeu050849.2' => 'oeu', 'Oeu051063.2' => 'oeu', 'Oeu052368.1' => 'oeu', 'Oeu052370.1' => 'oeu', 'Os01g0210400' => 'osa', 'Os01g0304300' => 'osa', 'Os01g0749100' => 'osa', 'Os02g0745800' => 'osa', 'Os03g0769050' => 'osa', 'Os05g0531500' => 'osa', 'Os06g0724300' => 'osa', 'Os11g0198100' => 'osa', 'Peaxi162Scf00069g01425' => 'pax', 'Peaxi162Scf00280g00811' => 'pax', 'Peaxi162Scf00310g00615' => 'pax', 'Peaxi162Scf00362g00542' => 'pax', 'Peaxi162Scf00461g00310' => 'pax', 'Peaxi162Scf00530g00118' => 'pax', 'Peaxi162Scf00541g00057' => 'pax', 'Peaxi162Scf00661g00017' => 'pax', 'Peaxi162Scf00926g00027' => 'pax', 'Peaxi162Scf01064g00263' => 'pax', 'Peaxi162Scf01211g00135' => 'pax', 'PGR004G2336' => 'pgr', 'PGR042G0327' => 'pgr', 'PGR042G1957' => 'pgr', 'PGR042G2003' => 'pgr', 'PGR042G3929' => 'pgr', 'PGR083G1137' => 'pgr', 'PGR083G1364' => 'pgr', 'PGSC0003DMG400003381' => 'stu', 'PGSC0003DMG400003417' => 'stu', 'PGSC0003DMG400008981' => 'stu', 'PGSC0003DMG400012417' => 'stu', 'PGSC0003DMG400012823' => 'stu', 'PGSC0003DMG400016885' => 'stu', 'PGSC0003DMG400022812' => 'stu', 'PGSC0003DMG400029726' => 'stu', 'PGSC0003DMG401009243' => 'stu', 'PGSC0003DMG401031505' => 'stu', 'PGSC0003DMG402031505' => 'stu', 'Phvul.001G017600' => 'pvu', 'Phvul.002G193500' => 'pvu', 'Phvul.002G228900' => 'pvu', 'Phvul.002G236800' => 'pvu', 'Phvul.003G049500' => 'pvu', 'Phvul.005G072000' => 'pvu', 'Phvul.006G164800' => 'pvu', 'Phvul.006G185100' => 'pvu', 'Phvul.007G090000' => 'pvu', 'Potri.001G399800' => 'ptr', 'Potri.002G149900' => 'ptr', 'Potri.004G044100' => 'ptr', 'Potri.004G177600' => 'ptr', 'Potri.009G138000' => 'ptr', 'Potri.010G094000' => 'ptr', 'Potri.011G053000' => 'ptr', 'Potri.011G119300' => 'ptr', 'Potri.013G113700' => 'ptr', 'Potri.018G107800' => 'ptr', 'Potri.019G084100' => 'ptr', 'Pp3c14_23720' => 'ppa', 'Pp3c16_6340' => 'ppa', 'Pp3c23_13420' => 'ppa', 'Pp3c24_2740' => 'ppa', 'Pp3c25_860' => 'ppa', 'Pp3c8_21750' => 'ppa', 'Prupe.1G273000' => 'ppe', 'Prupe.1G273700' => 'ppe', 'Prupe.1G274100' => 'ppe', 'Prupe.2G023300' => 'ppe', 'Prupe.4G048000' => 'ppe', 'Prupe.4G080400' => 'ppe', 'Prupe.4G181200' => 'ppe', 'Prupe.8G056900' => 'ppe', 'Prupe.8G168700' => 'ppe', 'Psat1g189080' => 'psa', 'Psat1g204760' => 'psa', 'Psat4g175560' => 'psa', 'Psat4g177720' => 'psa', 'Psat5g244240' => 'psa', 'Psat6g010720' => 'psa', 'Psat6g187200' => 'psa', 'Psat7g072040' => 'psa', 'PSO017G3501' => 'pso', 'PSO063G2148' => 'pso', 'PSO063G5608' => 'pso', 'PSO210G6392' => 'pso', 'PSO541G2319' => 'pso', 'PSO541G2836' => 'pso', 'PSO541G4012' => 'pso', 'PSO541G6253' => 'pso', 'PSO675G0580' => 'pso', 'PSO675G0856' => 'pso', 'PSO675G5635' => 'pso', 'PSO675G9157' => 'pso', 'PSO832G1660' => 'pso', 'PSO832G1969' => 'pso', 'QL02p007186' => 'qlo', 'QL02p033904' => 'qlo', 'QL03p064391' => 'qlo', 'QL05p040593' => 'qlo', 'QL05p058242' => 'qlo', 'QL08p021825' => 'qlo', 'QL11p004981' => 'qlo', 'RcHm_v2.0_Chr1g0318301' => 'rch', 'RcHm_v2.0_Chr4g0418501' => 'rch', 'RcHm_v2.0_Chr4g0439971' => 'rch', 'RcHm_v2.0_Chr5g0008541' => 'rch', 'RcHm_v2.0_Chr5g0014101' => 'rch', 'RcHm_v2.0_Chr5g0014131' => 'rch', 'RcHm_v2.0_Chr5g0033621' => 'rch', 'RcHm_v2.0_Chr6g0272041' => 'rch', 'RcHm_v2.0_Chr6g0278831' => 'rch', 'Rhsim02G0130400' => 'rsi', 'Rhsim02G0171100' => 'rsi', 'Rhsim05G0053000' => 'rsi', 'Rhsim05G0053100' => 'rsi', 'Rhsim06G0096500' => 'rsi', 'Rhsim06G0096600' => 'rsi', 'Rhsim06G0199100' => 'rsi', 'Rhsim12G0062300' => 'rsi', 'Rhsim12G0062800' => 'rsi', 'Sabra02G0118600' => 'sbr', 'Sabra04G0027300' => 'sbr', 'Sabra04G0119500' => 'sbr', 'Sabra08G0112500' => 'sbr', 'Sabra11G0036800' => 'sbr', 'Sabra11G0103800' => 'sbr', 'Sabra13G0096300' => 'sbr', 'Sabra16G0262300' => 'sbr', 'Sabra18G0091700' => 'sbr', 'Sabra19G0095400' => 'sbr', 'SalBow6G3080' => 'sbo', 'SalBow7G1157' => 'sbo', 'SalBow7G2123' => 'sbo', 'SalBow7G2285' => 'sbo', 'SalBow7G3537' => 'sbo', 'SalBow8G2947' => 'sbo', 'SalBow8G4463' => 'sbo', 'SalBow8G5466' => 'sbo', 'Sc01g0001750' => 'sci', 'Sc02g0006640' => 'sci', 'Sc02g0006670' => 'sci', 'Sc04g0008220' => 'sci', 'Sc05g0006190' => 'sci', 'Sc08g0002760' => 'sci', 'Sc17g0006170' => 'sci', 'Sc22g0002050' => 'sci', 'Sc23g0001190' => 'sci', 'Sc24g0000980' => 'sci', 'Sed0006245' => 'sed', 'Sed0007543' => 'sed', 'Sed0009411' => 'sed', 'Sed0010765' => 'sed', 'Sed0012944' => 'sed', 'Sed0014682' => 'sed', 'Sed0016174' => 'sed', 'Sed0016796' => 'sed', 'Sed0020317' => 'sed', 'Sed0021467' => 'sed', 'SEGI_01316' => 'sgi', 'SEGI_03374' => 'sgi', 'SEGI_16265' => 'sgi', 'SEGI_18569' => 'sgi', 'SEGI_20351' => 'sgi', 'SEGI_26395' => 'sgi', 'SEGI_29469' => 'sgi', 'SEGI_34771' => 'sgi', 'SEGI_36769' => 'sgi', 'SEGI_37139' => 'sgi', 'SGA_v2.0_scaffold100G29687' => 'sas', 'SGA_v2.0_scaffold118G32472' => 'sas', 'SGA_v2.0_scaffold14G07051' => 'sas', 'SGA_v2.0_scaffold183G39845' => 'sas', 'SGA_v2.0_scaffold1G00174' => 'sas', 'SGA_v2.0_scaffold22G09714' => 'sas', 'SGA_v2.0_scaffold333G48992' => 'sas', 'SGA_v2.0_scaffold46G17491' => 'sas', 'SGA_v2.0_scaffold49G18294' => 'sas', 'SGA_v2.0_scaffold63G21658' => 'sas', 'SHI01741' => 'shi', 'SHI05771' => 'shi', 'SHI18077' => 'shi', 'SHI20525' => 'shi', 'SHI20527' => 'shi', 'SHI20528' => 'shi', 'SMO172G0185' => 'smo', 'SMO198G0020' => 'smo', 'SMO351G0006' => 'smo', 'SMO356G0118' => 'smo', 'SMO358G0296' => 'smo', 'SMO367G0079' => 'smo', 'SMO367G1277' => 'smo', 'Solyc01g014220.3' => 'sly', 'Solyc01g111770.2' => 'sly', 'Solyc02g078180.3' => 'sly', 'Solyc03g006430.3' => 'sly', 'Solyc03g006456.1' => 'sly', 'Solyc03g079860.2' => 'sly', 'Solyc04g079770.3' => 'sly', 'Solyc05g007430.4' => 'sly', 'Solyc07g063150.3' => 'sly', 'Solyc08g016620.3' => 'sly', 'Solyc09g057590.3' => 'sly', 'Solyc09g057600.1' => 'sly', 'Solyc10g009050.3' => 'sly', 'Solyc11g017420.2' => 'sly', 'Sopen01g053810' => 'spe', 'Sopen02g023040' => 'spe', 'Sopen03g002440' => 'spe', 'Sopen04g033350' => 'spe', 'Sopen05g003310' => 'spe', 'Sopen07g004050' => 'spe', 'Sopen07g031340' => 'spe', 'Sopen08g006990' => 'spe', 'Sopen10g004830' => 'spe', 'Sopen11g009370' => 'spe', 'Sp1g24450' => 'spa', 'Sp1g29670' => 'spa', 'Sp1g39600' => 'spa', 'Sp2g11080' => 'spa', 'Sp2g13970' => 'spa', 'Sp4g16130' => 'spa', 'Sp6g13080' => 'spa', 'Sp7g37270' => 'spa', 'TAR371G0065' => 'tar', 'TAR376G0340' => 'tar', 'TAR376G0435' => 'tar', 'TAR381G0002' => 'tar', 'TAR381G1236' => 'tar', 'TAR624G0055' => 'tar', 'TAR624G0324' => 'tar', 'TAR624G0696' => 'tar', 'TAR624G0906' => 'tar', 'TAR625G0107' => 'tar', 'TAR626G0015' => 'tar', 'TAR626G1356' => 'tar', 'TAR627G0888' => 'tar', 'TAR628G0399' => 'tar', 'TAR628G1327' => 'tar', 'TAR629G2831' => 'tar', 'TAR629G2874' => 'tar', 'TAR633G1432' => 'tar', 'TAR633G2771' => 'tar', 'THA.LOC104803394' => 'tha', 'THA.LOC104805153' => 'tha', 'THA.LOC104806784' => 'tha', 'THA.LOC104810473' => 'tha', 'THA.LOC104813100' => 'tha', 'THA.LOC104814215' => 'tha', 'THA.LOC104815554' => 'tha', 'THA.LOC104820544' => 'tha', 'THA.LOC104824754' => 'tha', 'THA.LOC104827717' => 'tha', 'Thecc.02G031400' => 'tca', 'Thecc.02G055900' => 'tca', 'Thecc.02G350800' => 'tca', 'Thecc.06G150900' => 'tca', 'Thecc.06G186600' => 'tca', 'Thecc.07G089600' => 'tca', 'Thecc.08G020400' => 'tca', 'Thecc.08G182100' => 'tca', 'Thhalv10000873m.g' => 'esa', 'Thhalv10004185m.g' => 'esa', 'Thhalv10006981m.g' => 'esa', 'Thhalv10007204m.g' => 'esa', 'Thhalv10011374m.g' => 'esa', 'Thhalv10013482m.g' => 'esa', 'Thhalv10017801m.g' => 'esa', 'Thhalv10024983m.g' => 'esa', 'TPR.G12072' => 'tpr', 'TPR.G15769' => 'tpr', 'TPR.G16504' => 'tpr', 'TPR.G16506' => 'tpr', 'TPR.G24345' => 'tpr', 'TPR.G26666' => 'tpr', 'TPR.G27320' => 'tpr', 'TPR.G31819' => 'tpr', 'TPR.G38879' => 'tpr', 'TPR.G39015' => 'tpr', 'TPR.G8819' => 'tpr', 'TWI09G0924' => 'twi', 'TWI12G0811' => 'twi', 'TWI12G1294' => 'twi', 'TWI31G0150' => 'twi', 'TWI36G1262' => 'twi', 'TWI38G1287' => 'twi', 'TWI38G1633' => 'twi', 'TWI38G1982' => 'twi', 'TWI39G0116' => 'twi', 'TWI60G1011' => 'twi', 'TWI63G0171' => 'twi', 'TWI73G0839' => 'twi', 'TWI79G1511' => 'twi', 'unitig_0.g915' => 'ugi', 'unitig_0.g916' => 'ugi', 'unitig_21.g20219' => 'ugi', 'unitig_21.g20416' => 'ugi', 'unitig_578.g16132' => 'ugi', 'unitig_578.g16718' => 'ugi', 'unitig_62.g23481' => 'ugi', 'unitig_744.g24535' => 'ugi', 'unitig_749.g13525' => 'ugi', 'vmacro01248' => 'vma', 'vmacro02290' => 'vma', 'vmacro10946' => 'vma', 'vmacro11865' => 'vma', 'vmacro12493' => 'vma', 'vmacro17322' => 'vma', 'vmacro21599' => 'vma', 'vmacro23041' => 'vma', 'VMungo0251G0004' => 'vmu', 'VMungo0251G2639' => 'vmu', 'VMungo0251G2967' => 'vmu', 'VMungo0540G0864' => 'vmu', 'VMungo0540G1569' => 'vmu', 'VMungo0647G0317' => 'vmu', 'VMungo0720G1373' => 'vmu', 'VMungo0720G1508' => 'vmu', 'VMungo1080G0485' => 'vmu', 'VMungo1215G3177' => 'vmu', 'Zm00001eb112600' => 'zma', 'Zm00001eb120220' => 'zma', 'Zm00001eb153240' => 'zma', 'Zm00001eb168880' => 'zma', 'Zm00001eb213920' => 'zma', 'Zm00001eb228280' => 'zma', 'Zm00001eb254580' => 'zma', 'Zm00001eb272180' => 'zma', 'Zm00001eb293190' => 'zma', 'Zm00001eb322930' => 'zma', 'Zm00001eb353360' => 'zma', 'Zm00001eb353390' => 'zma', 'Zm00001eb353430' => 'zma', 'Zm00001eb353440' => 'zma', 'Zm00001eb353780' => 'zma' ) $gf_id = 'HOM05D000499' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000499' ) $data_identifier = 'HOM05D000499' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 29, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 12, 'amhyb' => (int) 8, 'aly' => (int) 12, 'aox' => (int) 9, 'arhy' => (int) 26, 'ath' => (int) 8, 'atr' => (int) 7, 'acertr' => (int) 10, 'cqu' => (int) 15, 'bca' => (int) 29, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 11, 'cansat' => (int) 8, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 9, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 8, 'cpa' => (int) 10, 'csa' => (int) 7, 'camsi' => (int) 20, 'dca' => (int) 8, 'din' => (int) 12, 'dzi' => (int) 14, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 6, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 38, 'gra' => (int) 16, 'vvi' => (int) 8, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 5, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 11, 'lja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 11, 'mpo' => (int) 3, 'mbi' => (int) 14, 'mdo' => (int) 14, 'mtr' => (int) 8, 'cme' => (int) 9, 'egut' => (int) 9, 'ama' => (int) 11, 'nta' => (int) 17, 'nnu' => (int) 11, 'oeu' => (int) 18, 'osa' => (int) 8, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 6, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 9, 'rsi' => (int) 9, 'sbr' => (int) 10, 'sbo' => (int) 8, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 10, 'sas' => (int) 10, 'shi' => (int) 6, 'smo' => (int) 7, 'sly' => (int) 14, 'spe' => (int) 10, 'spa' => (int) 8, 'tar' => (int) 19, 'tha' => (int) 10, 'tca' => (int) 8, 'esa' => (int) 8, 'tpr' => (int) 11, 'twi' => (int) 13, 'ugi' => (int) 9, 'vma' => (int) 8, 'vmu' => (int) 10, 'zma' => (int) 15 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb353780' $species_info = array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ) $local_species = 'cme' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000499', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1066', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p29780' => 'bna', 'A02p33180' => 'bna', 'A03p16470' => 'bna', 'A03p66010' => 'bna', 'A04p25970' => 'bna', 'A06p01270' => 'bna', 'A06p46080' => 'bna', 'A07p11400' => 'bna', 'A08p01840' => 'bna', 'A08p08230' => 'bna', 'A08p25740' => 'bna', 'A09p32070' => 'bna', 'A09p37830' => 'bna', 'A09p42840' => 'bna', 'A09p42850' => 'bna', 'Aa31LG10G2060' => 'aar', 'Aa31LG2G7410' => 'aar', 'Aa31LG6G10200' => 'aar', 'Aa31LG6G16680' => 'aar', 'Aa31LG6G8470' => 'aar', 'Aa31LG9G12730' => 'aar', 'Aa31LG9G13680' => 'aar', 'Aa31LG9G14920' => 'aar', 'Aa31LG9G6650' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4977' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5467' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3254' => 'aag', 'Actinidia02578' => 'ach', 'Actinidia07693' => 'ach', 'Actinidia08413' => 'ach', 'Actinidia08414' => 'ach', 'Actinidia15289' => 'ach', 'Actinidia19871' => 'ach', 'Actinidia21475' => 'ach', 'Actinidia22576' => 'ach', 'Actinidia28327' => 'ach', 'Actinidia32491' => 'ach', 'Actinidia39463' => 'ach', 'Actinidia39571' => 'ach', 'Ah.01g013750' => 'amhyb', 'Ah.01g023210' => 'amhyb', 'Ah.04g164850' => 'amhyb', 'Ah.05g178060' => 'amhyb', 'Ah.07g204270' => 'amhyb', 'Ah.07g208480' => 'amhyb', 'Ah.09g237410' => 'amhyb', 'Ah.14g089460' => 'amhyb', 'AL1G41790' => 'aly', 'AL1G49050' => 'aly', 'AL1G53810' => 'aly', 'AL1G61400' => 'aly', 'AL4G18580' => 'aly', 'AL5G12510' => 'aly', 'AL5G12540' => 'aly', 'AL6G43230' => 'aly', 'AL7G10370' => 'aly', 'AL7G19250' => 'aly', 'AL8G12240' => 'aly', 'AL8G18540' => 'aly', 'Aqoxy1G02409' => 'aox', 'Aqoxy2G03993' => 'aox', 'Aqoxy3G03357' => 'aox', 'Aqoxy4G00785' => 'aox', 'Aqoxy5G02598' => 'aox', 'Aqoxy6G00132' => 'aox', 'Aqoxy7G01776' => 'aox', 'Aqoxy7G02316' => 'aox', 'Aqoxy7G03973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.12AFKW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B8730' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27IQR1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3F75VG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3RE0GA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41TCQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.527VTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FIR39' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5W8UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DA38EV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ63HS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H1I32C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HC27T5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4M8AP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7N3CZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9UVDZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LS1NQA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT1D4B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SKC4TM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCFV76' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF9Q1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQWD9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1ZM88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WE07RT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YCK7VH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJE6Q6' => 'arhy', 'AT1G28240' => 'ath', 'AT1G34550' => 'ath', 'AT1G53040' => 'ath', 'AT2G02910' => 'ath', 'AT4G09630' => 'ath', 'AT4G38500' => 'ath', 'AT5G42660' => 'ath', 'AT5G46220' => 'ath', 'ATR0152G026' => 'atr', 'ATR0564G343' => 'atr', 'ATR0706G151' => 'atr', 'ATR0733G207' => 'atr', 'ATR0751G234' => 'atr', 'ATR0807G048' => 'atr', 'ATR1091G084' => 'atr', 'Atru.chr10.1229' => 'acertr', 'Atru.chr10.1230' => 'acertr', 'Atru.chr10.1874' => 'acertr', 'Atru.chr11.1808' => 'acertr', 'Atru.chr13.1795' => 'acertr', 'Atru.chr13.570' => 'acertr', 'Atru.chr2.2608' => 'acertr', 'Atru.chr2.2609' => 'acertr', 'Atru.chr5.3428' => 'acertr', 'Atru.chr8.1171' => 'acertr', 'AUR62004651' => 'cqu', 'AUR62008675' => 'cqu', 'AUR62010014' => 'cqu', 'AUR62013004' => 'cqu', 'AUR62014825' => 'cqu', 'AUR62015015' => 'cqu', 'AUR62015151' => 'cqu', 'AUR62017020' => 'cqu', 'AUR62019422' => 'cqu', 'AUR62023570' => 'cqu', 'AUR62025571' => 'cqu', 'AUR62029098' => 'cqu', 'AUR62033863' => 'cqu', 'AUR62034296' => 'cqu', 'AUR62040075' => 'cqu', 'BcaB02g07334' => 'bca', 'BcaB02g10575' => 'bca', 'BcaB03g12119' => 'bca', 'BcaB03g12120' => 'bca', 'BcaB03g13945' => 'bca', 'BcaB04g17123' => 'bca', 'BcaB04g17867' => 'bca', 'BcaB04g19839' => 'bca', 'BcaB07g30317' => 'bca', 'BcaB07g32432' => 'bca', 'BcaB07g33362' => 'bca', 'BcaB08g36611' => 'bca', 'BcaC01g00028' => 'bca', 'BcaC01g01356' => 'bca', 'BcaC01g02034' => 'bca', 'BcaC01g06051' => 'bca', 'BcaC03g16839' => 'bca', 'BcaC03g17176' => 'bca', 'BcaC05g26829' => 'bca', 'BcaC06g31490' => 'bca', 'BcaC06g35344' => 'bca', 'BcaC06g36570' => 'bca', 'BcaC07g37537' => 'bca', 'BcaC08g43491' => 'bca', 'BcaC08g43773' => 'bca', 'BcaNung00234' => 'bca', 'BcaNung01982' => 'bca', 'BcaNung03707' => 'bca', 'BcaNung06454' => 'bca', 'BolC2t10762H' => 'bol', 'BolC2t11191H' => 'bol', 'BolC3t14322H' => 'bol', 'BolC3t19747H' => 'bol', 'BolC3t21425H' => 'bol', 'BolC4t27800H' => 'bol', 'BolC5t31423H' => 'bol', 'BolC6t35951H' => 'bol', 'BolC6t36282H' => 'bol', 'BolC7t40678H' => 'bol', 'BolC7t40679H' => 'bol', 'BolC7t42222H' => 'bol', 'BolC7t43492H' => 'bol', 'BolC7t46785H' => 'bol', 'BolC8t47853H' => 'bol', 'BolC9t56805H' => 'bol', 'BraA02t08000Z' => 'bra', 'BraA02t08341Z' => 'bra', 'BraA03t10936Z' => 'bra', 'BraA03t15657Z' => 'bra', 'BraA04t18100Z' => 'bra', 'BraA05t20523Z' => 'bra', 'BraA06t23353Z' => 'bra', 'BraA06t27473Z' => 'bra', 'BraA06t27769Z' => 'bra', 'BraA07t28928Z' => 'bra', 'BraA08t32236Z' => 'bra', 'BraA08t32841Z' => 'bra', 'BraA08t34524Z' => 'bra', 'BraA09t38742Z' => 'bra', 'BraA09t39295Z' => 'bra', 'C02p47180' => 'bna', 'C02p50990' => 'bna', 'C03p19360' => 'bna', 'C03p74950' => 'bna', 'C03p91000' => 'bna', 'C04p63260' => 'bna', 'C05p27050' => 'bna', 'C06p08750' => 'bna', 'C06p11490' => 'bna', 'C07p02820' => 'bna', 'C07p17180' => 'bna', 'C07p29440' => 'bna', 'C07p63730' => 'bna', 'C09p39260' => 'bna', 'CAN.G1164.34' => 'can', 'CAN.G1164.39' => 'can', 'CAN.G1530.3' => 'can', 'CAN.G162.61' => 'can', 'CAN.G176.6' => 'can', 'CAN.G289.49' => 'can', 'CAN.G370.21' => 'can', 'CAN.G370.22' => 'can', 'CAN.G371.117' => 'can', 'CAN.G58.37' => 'can', 'CAN.G588.98' => 'can', 'CANSAT21G2266' => 'cansat', 'CANSAT25G2799' => 'cansat', 'CANSAT35G0862' => 'cansat', 'CANSAT35G1704' => 'cansat', 'CANSAT35G1760' => 'cansat', 'CANSAT56G3971' => 'cansat', 'CANSAT56G4116' => 'cansat', 'CANSAT80G1259' => 'cansat', 'CARHR027730' => 'chi', 'CARHR033880' => 'chi', 'CARHR043270' => 'chi', 'CARHR145330' => 'chi', 'CARHR145340' => 'chi', 'CARHR175570' => 'chi', 'CARHR181570' => 'chi', 'CARHR258470' => 'chi', 'CARHR260490' => 'chi', 'CARHR294220' => 'chi', 'Carub.0001s2668' => 'cru', 'Carub.0001s3257' => 'cru', 'Carub.0001s4220' => 'cru', 'Carub.0005s0179' => 'cru', 'Carub.0006s2807' => 'cru', 'Carub.0007s0039' => 'cru', 'Carub.0008s0169' => 'cru', 'Carub.0008s0636' => 'cru', 'Ca_00338_v3' => 'car', 'Ca_00542_v3' => 'car', 'Ca_01844_v3' => 'car', 'Ca_10611_v3' => 'car', 'Ca_13326_v3' => 'car', 'Ca_17944_v3' => 'car', 'Ca_18546_v3' => 'car', 'Ca_24219_v3' => 'car', 'Ca_29972_v3' => 'car', 'CBR_g3681' => 'cbr', 'CBR_g40021' => 'cbr', 'Cc01_g08140' => 'ccan', 'Cc02_g13410' => 'ccan', 'Cc02_g37480' => 'ccan', 'Cc05_g12030' => 'ccan', 'Cc09_g03370' => 'ccan', 'Cc09_g10300' => 'ccan', 'Cc10_g03530' => 'ccan', 'Cc10_g11380' => 'ccan', 'CDE01G0176' => 'cde', 'CDE02G0675' => 'cde', 'CDE02G0942' => 'cde', 'CDE02G1153' => 'cde', 'CDE02G4177' => 'cde', 'CDE04G2117' => 'cde', 'CDE04G2736' => 'cde', 'CDE08G1161' => 'cde', 'CDE09G1238' => 'cde', 'Cfa000467' => 'cfa', 'Cfa000947' => 'cfa', 'Cfa004969' => 'cfa', 'Cfa005284' => 'cfa', 'Cfa008993' => 'cfa', 'Cfa018187' => 'cfa', 'Cfa018454' => 'cfa', 'Cfa020585' => 'cfa', 'Ciclev10000424m.g' => 'ccl', 'Ciclev10003605m.g' => 'ccl', 'Ciclev10007828m.g' => 'ccl', 'Ciclev10014620m.g' => 'ccl', 'Ciclev10015169m.g' => 'ccl', 'Ciclev10018291m.g' => 'ccl', 'Ciclev10028256m.g' => 'ccl', 'Ciclev10033822m.g' => 'ccl', 'CiPaw.05G060300' => 'cil', 'CiPaw.05G085000' => 'cil', 'CiPaw.06G083700' => 'cil', 'CiPaw.06G120300' => 'cil', 'CiPaw.09G060500' => 'cil', 'CiPaw.09G123800' => 'cil', 'CiPaw.11G169700' => 'cil', 'CiPaw.12G118300' => 'cil', 'CiPaw.15G071000' => 'cil', 'CiPaw.15G081900' => 'cil', 'ClCG01G024610' => 'cla', 'ClCG03G006070' => 'cla', 'ClCG05G019250' => 'cla', 'ClCG09G009500' => 'cla', 'ClCG11G008200' => 'cla', 'ClCG11G018080' => 'cla', 'COL.COLO4_17373' => 'col', 'COL.COLO4_22994' => 'col', 'COL.COLO4_26389' => 'col', 'COL.COLO4_27170' => 'col', 'COL.COLO4_31074' => 'col', 'COL.COLO4_31465' => 'col', 'COL.COLO4_36438' => 'col', 'COL.COLO4_36439' => 'col', 'Cpa.g.c38781' => 'cpa', 'Cpa.g.sc128.12' => 'cpa', 'Cpa.g.sc166.7' => 'cpa', 'Cpa.g.sc166.8' => 'cpa', 'Cpa.g.sc20.111' => 'cpa', 'Cpa.g.sc27.31' => 'cpa', 'Cpa.g.sc64.36' => 'cpa', 'Cpa.g.sc64.37' => 'cpa', 'Cpa.g.sc66.49' => 'cpa', 'Cpa.g.sc80.64' => 'cpa', 'CsaV3_1G012320' => 'csa', 'CsaV3_2G008480' => 'csa', 'CsaV3_2G033450' => 'csa', 'CsaV3_3G044830' => 'csa', 'CsaV3_4G033710' => 'csa', 'CsaV3_6G051730' => 'csa', 'CsaV3_7G025350' => 'csa', 'CSS0001067' => 'camsi', 'CSS0005996' => 'camsi', 'CSS0006590' => 'camsi', 'CSS0009673' => 'camsi', 'CSS0010201' => 'camsi', 'CSS0010549' => 'camsi', 'CSS0011364' => 'camsi', 'CSS0014473' => 'camsi', 'CSS0014961' => 'camsi', 'CSS0020191' => 'camsi', 'CSS0021165' => 'camsi', 'CSS0022306' => 'camsi', 'CSS0030591' => 'camsi', 'CSS0030696' => 'camsi', 'CSS0032653' => 'camsi', 'CSS0037487' => 'camsi', 'CSS0041102' => 'camsi', 'CSS0041261' => 'camsi', 'CSS0046246' => 'camsi', 'CSS0049256' => 'camsi', 'DCAR_004075' => 'dca', 'DCAR_011538' => 'dca', 'DCAR_019553' => 'dca', 'DCAR_020952' => 'dca', 'DCAR_021739' => 'dca', 'DCAR_027407' => 'dca', 'DCAR_027913' => 'dca', 'DCAR_028066' => 'dca', 'Dinv05899' => 'din', 'Dinv07563' => 'din', 'Dinv08010' => 'din', 'Dinv14125' => 'din', 'Dinv20172' => 'din', 'Dinv30743' => 'din', 'Dinv31229' => 'din', 'Dinv34162' => 'din', 'Dinv36028' => 'din', 'Dinv39368' => 'din', 'Dinv40565' => 'din', 'Dinv41706' => 'din', 'Duzib052G0089' => 'dzi', 'Duzib116G0641' => 'dzi', 'Duzib132G0069' => 'dzi', 'Duzib132G1219' => 'dzi', 'Duzib147G0278' => 'dzi', 'Duzib160G0480' => 'dzi', 'Duzib170G0661' => 'dzi', 'Duzib177G0591' => 'dzi', 'Duzib187G1353' => 'dzi', 'Duzib192G0858' => 'dzi', 'Duzib192G0883' => 'dzi', 'Duzib213G0506' => 'dzi', 'Duzib235G0289' => 'dzi', 'Duzib251G0422' => 'dzi', 'ECA232G3898' => 'eca', 'ECA233G5950' => 'eca', 'ECA234G1699' => 'eca', 'ECA234G2421' => 'eca', 'ECA236G0426' => 'eca', 'ECA236G4331' => 'eca', 'ECA248G2573' => 'eca', 'EL10Ac1g00077' => 'bvu', 'EL10Ac1g01746' => 'bvu', 'EL10Ac2g03464' => 'bvu', 'EL10Ac4g08176' => 'bvu', 'EL10Ac7g17521' => 'bvu', 'EL10Ac8g20386' => 'bvu', 'EL10Ac9g21343' => 'bvu', 'EL10Ac9g22688' => 'bvu', 'Eucgr.B03434' => 'egr', 'Eucgr.D00618' => 'egr', 'Eucgr.E02395' => 'egr', 'Eucgr.F01129' => 'egr', 'Eucgr.F02622' => 'egr', 'Eucgr.F04207' => 'egr', 'FAN01G0570' => 'fan', 'FAN03G3351' => 'fan', 'FAN06G3702' => 'fan', 'FAN07G2149' => 'fan', 'FAN10G3758' => 'fan', 'FAN11G1170' => 'fan', 'FAN11G2050' => 'fan', 'FAN11G2724' => 'fan', 'FAN12G1700' => 'fan', 'FAN12G2028' => 'fan', 'FAN15G1160' => 'fan', 'FAN15G3063' => 'fan', 'FAN16G2540' => 'fan', 'FAN16G3077' => 'fan', 'FAN16G3624' => 'fan', 'FAN17G0221' => 'fan', 'FAN20G2492' => 'fan', 'FAN20G2905' => 'fan', 'FAN21G0548' => 'fan', 'FAN21G1300' => 'fan', 'FAN22G0077' => 'fan', 'FAN22G1315' => 'fan', 'FAN24G1280' => 'fan', 'FAN24G1445' => 'fan', 'FAN24G3527' => 'fan', 'FAN25G0464' => 'fan', 'FAN25G2885' => 'fan', 'FAN25G3270' => 'fan', 'FAN27G1101' => 'fan', 'FAN27G2846' => 'fan', 'FAN27G3524' => 'fan', 'FvH4_2g11770' => 'fve', 'FvH4_2g15630' => 'fve', 'FvH4_3g05570' => 'fve', 'FvH4_3g09110' => 'fve', 'FvH4_3g19940' => 'fve', 'FvH4_4g04821' => 'fve', 'FvH4_4g31480' => 'fve', 'FvH4_7g01740' => 'fve', 'Glyma.05G130400' => 'gma', 'Glyma.05G156400' => 'gma', 'Glyma.07G197000' => 'gma', 'Glyma.08G085151' => 'gma', 'Glyma.08G114500' => 'gma', 'Glyma.08G300400' => 'gma', 'Glyma.10G215800' => 'gma', 'Glyma.12G224400' => 'gma', 'Glyma.13G179300' => 'gma', 'Glyma.13G218151' => 'gma', 'Glyma.13G238800' => 'gma', 'Glyma.13G276900' => 'gma', 'Glyma.14G078200' => 'gma', 'Glyma.15G074500' => 'gma', 'Glyma.15G094100' => 'gma', 'Glyma.17G247200' => 'gma', 'Glyma.18G120100' => 'gma', 'Glyma.20G176000' => 'gma', 'Gohir.A01G063600' => 'ghi', 'Gohir.A01G170301' => 'ghi', 'Gohir.A02G060500' => 'ghi', 'Gohir.A05G133850' => 'ghi', 'Gohir.A05G161400' => 'ghi', 'Gohir.A06G012900' => 'ghi', 'Gohir.A06G035901' => 'ghi', 'Gohir.A06G127100' => 'ghi', 'Gohir.A06G210500' => 'ghi', 'Gohir.A08G008650' => 'ghi', 'Gohir.A09G072700' => 'ghi', 'Gohir.A09G088301' => 'ghi', 'Gohir.A10G040600' => 'ghi', 'Gohir.A12G036300' => 'ghi', 'Gohir.A12G143350' => 'ghi', 'Gohir.A12G165500' => 'ghi', 'Gohir.A13G145700' => 'ghi', 'Gohir.D01G050000' => 'ghi', 'Gohir.D01G051366' => 'ghi', 'Gohir.D01G161350' => 'ghi', 'Gohir.D02G065900' => 'ghi', 'Gohir.D05G164200' => 'ghi', 'Gohir.D05G355500' => 'ghi', 'Gohir.D06G010400' => 'ghi', 'Gohir.D06G111250' => 'ghi', 'Gohir.D06G132000' => 'ghi', 'Gohir.D06G210500' => 'ghi', 'Gohir.D07G165675' => 'ghi', 'Gohir.D08G062240' => 'ghi', 'Gohir.D08G086101' => 'ghi', 'Gohir.D08G138060' => 'ghi', 'Gohir.D09G072300' => 'ghi', 'Gohir.D10G041400' => 'ghi', 'Gohir.D11G191020' => 'ghi', 'Gohir.D11G212066' => 'ghi', 'Gohir.D12G036300' => 'ghi', 'Gohir.D12G168600' => 'ghi', 'Gohir.D13G150600' => 'ghi', 'Gorai.001G057300' => 'gra', 'Gorai.002G069900' => 'gra', 'Gorai.002G200000' => 'gra', 'Gorai.003G067600' => 'gra', 'Gorai.005G074800' => 'gra', 'Gorai.006G087300' => 'gra', 'Gorai.008G037500' => 'gra', 'Gorai.008G181400' => 'gra', 'Gorai.009G169400' => 'gra', 'Gorai.009G387900' => 'gra', 'Gorai.010G013300' => 'gra', 'Gorai.010G153800' => 'gra', 'Gorai.010G255800' => 'gra', 'Gorai.011G043700' => 'gra', 'Gorai.011G198900' => 'gra', 'Gorai.013G168400' => 'gra', 'GSVIVG01005212001' => 'vvi', 'GSVIVG01006163001' => 'vvi', 'GSVIVG01009625001' => 'vvi', 'GSVIVG01014338001' => 'vvi', 'GSVIVG01020005001' => 'vvi', 'GSVIVG01021450001' => 'vvi', 'GSVIVG01023975001' => 'vvi', 'GSVIVG01034490001' => 'vvi', 'HanXRQChr04g0112071' => 'han', 'HanXRQChr05g0131151' => 'han', 'HanXRQChr09g0262371' => 'han', 'HanXRQChr09g0268401' => 'han', 'HanXRQChr10g0279241' => 'han', 'HanXRQChr10g0297961' => 'han', 'HanXRQChr11g0326231' => 'han', 'HanXRQChr11g0328471' => 'han', 'HanXRQChr16g0507941' => 'han', 'HanXRQChr17g0560211' => 'han', 'Haze_02108' => 'cav', 'Haze_02428' => 'cav', 'Haze_05593' => 'cav', 'Haze_06448' => 'cav', 'Haze_09427' => 'cav', 'Haze_12022' => 'cav', 'Haze_17612' => 'cav', 'Haze_17928' => 'cav', 'Hma1.2p1_0032F.1_g019250' => 'hma', 'Hma1.2p1_0163F.1_g072690' => 'hma', 'Hma1.2p1_0265F.1_g106710' => 'hma', 'Hma1.2p1_0286F.1_g113970' => 'hma', 'Hma1.2p1_0363F.1_g136640' => 'hma', 'Hma1.2p1_0584F.1_g183470' => 'hma', 'Hma1.2p1_0885F.1_g232570' => 'hma', 'HPP92_006022' => 'vpl', 'HPP92_007320' => 'vpl', 'HPP92_011521' => 'vpl', 'HPP92_019387' => 'vpl', 'HPP92_024038' => 'vpl', 'Hund05891' => 'sun', 'Hund06450' => 'sun', 'Hund12053' => 'sun', 'Hund16800' => 'sun', 'Hund21222' => 'sun', 'Hund22896' => 'sun', 'Hund23746' => 'sun', 'Hund27083' => 'sun', 'Lalb_Chr02g0141831' => 'lal', 'Lalb_Chr02g0141841' => 'lal', 'Lalb_Chr05g0220411' => 'lal', 'Lalb_Chr06g0162081' => 'lal', 'Lalb_Chr09g0327651' => 'lal', 'Lalb_Chr13g0295051' => 'lal', 'Lalb_Chr15g0086801' => 'lal', 'Lalb_Chr16g0383781' => 'lal', 'Lalb_Chr16g0383791' => 'lal', 'Lalb_Chr18g0055441' => 'lal', 'Lalb_Chr18g0059611' => 'lal', 'Lalb_Chr20g0109661' => 'lal', 'Lalb_Chr20g0109831' => 'lal', 'Lalb_Chr20g0121871' => 'lal', 'Lalb_Chr22g0355361' => 'lal', 'Lalb_Chr25g0286371' => 'lal', 'Lj1A1187G43' => 'lonja', 'Lj1A1205T50' => 'lonja', 'Lj1A800G33' => 'lonja', 'Lj1C1187T7' => 'lonja', 'Lj1C843T11' => 'lonja', 'Lj1g0010940' => 'lja', 'Lj2A288T69' => 'lonja', 'Lj3g0024276' => 'lja', 'Lj4A47T76' => 'lonja', 'Lj4g0005805' => 'lja', 'Lj4g0006097' => 'lja', 'Lj4g0008528' => 'lja', 'Lj4g0024907' => 'lja', 'Lj5g0012472' => 'lja', 'Lj5g0018648' => 'lja', 'Lj6C789G1' => 'lonja', 'Lj6g0004000' => 'lja', 'Lj7A292G67' => 'lonja', 'Lj7A292T64' => 'lonja', 'Lj9A400T58' => 'lonja', 'Lsat_1_v5_gn_1_126181' => 'lsa', 'Lsat_1_v5_gn_4_123041' => 'lsa', 'Lsat_1_v5_gn_4_133620' => 'lsa', 'Lsat_1_v5_gn_4_53221' => 'lsa', 'Lsat_1_v5_gn_4_71961' => 'lsa', 'Lsat_1_v5_gn_7_105241' => 'lsa', 'Lsat_1_v5_gn_7_21361' => 'lsa', 'Lsat_1_v5_gn_7_28860' => 'lsa', 'Lsat_1_v5_gn_7_31260' => 'lsa', 'Lsat_1_v5_gn_8_52801' => 'lsa', 'Manes.02G191400' => 'mes', 'Manes.03G110100' => 'mes', 'Manes.04G071100' => 'mes', 'Manes.05G100500' => 'mes', 'Manes.05G164700' => 'mes', 'Manes.15G087000' => 'mes', 'Manes.15G121500' => 'mes', 'Manes.16G028300' => 'mes', 'Manes.17G046100' => 'mes', 'Manes.17G069800' => 'mes', 'Manes.18G100500' => 'mes', 'Mapoly0002s0109' => 'mpo', 'Mapoly0024s0007' => 'mpo', 'Mapoly0089s0032' => 'mpo', 'MBI04_g42241_MAGBIO' => 'mbi', 'MBI05_g11988_MAGBIO' => 'mbi', 'MBI05_g35452_MAGBIO' => 'mbi', 'MBI07_g30179_MAGBIO' => 'mbi', 'MBI07_g35859_MAGBIO' => 'mbi', 'MBI07_g35860_MAGBIO' => 'mbi', 'MBI07_g37166_MAGBIO' => 'mbi', 'MBI08_g18172_MAGBIO' => 'mbi', 'MBI09_g08441_MAGBIO' => 'mbi', 'MBI13_g01676_MAGBIO' => 'mbi', 'MBI14_g42955_MAGBIO' => 'mbi', 'MBI16_g13161_MAGBIO' => 'mbi', 'MBI17_g27204_MAGBIO' => 'mbi', 'MBI19_g21595_MAGBIO' => 'mbi', 'MD00G1148400' => 'mdo', 'MD02G1301200' => 'mdo', 'MD03G1227800' => 'mdo', 'MD05G1041100' => 'mdo', 'MD05G1124800' => 'mdo', 'MD05G1284000' => 'mdo', 'MD05G1338800' => 'mdo', 'MD05G1338900' => 'mdo', 'MD07G1022800' => 'mdo', 'MD10G1047500' => 'mdo', 'MD10G1127500' => 'mdo', 'MD10G1262300' => 'mdo', 'MD10G1293800' => 'mdo', 'MD16G1074300' => 'mdo', 'Medtr1g021670' => 'mtr', 'Medtr1g096320' => 'mtr', 'Medtr2g013690' => 'mtr', 'Medtr2g019450' => 'mtr', 'Medtr2g085170' => 'mtr', 'Medtr4g088785' => 'mtr', 'Medtr8g055930' => 'mtr', 'Medtr8g085850' => 'mtr', 'MELO3C002605.2' => 'cme', 'MELO3C003891.2' => 'cme', 'MELO3C004012.2' => 'cme', 'MELO3C007134.2' => 'cme', 'MELO3C008118.2' => 'cme', 'MELO3C016700.2' => 'cme', 'MELO3C024127.2' => 'cme', 'MELO3C033361.2' => 'cme', 'MELO3C033362.2' => 'cme', 'Migut.C00430' => 'egut', 'Migut.C01246' => 'egut', 'Migut.E00101' => 'egut', 'Migut.H01486' => 'egut', 'Migut.H01939' => 'egut', 'Migut.K00360' => 'egut', 'Migut.M00910' => 'egut', 'Migut.M01139' => 'egut', 'Migut.N02677' => 'egut', 'MSTRG.13252' => 'ama', 'MSTRG.14701' => 'ama', 'MSTRG.1521' => 'ama', 'MSTRG.15884' => 'ama', 'MSTRG.16242' => 'ama', 'MSTRG.22285' => 'ama', 'MSTRG.22444' => 'ama', 'MSTRG.2349' => 'ama', 'MSTRG.26308' => 'ama', 'MSTRG.28296' => 'ama', 'MSTRG.9895' => 'ama', 'Nitab4.5_0000110g0060' => 'nta', 'Nitab4.5_0000420g0130' => 'nta', 'Nitab4.5_0000422g0030' => 'nta', 'Nitab4.5_0000560g0180' => 'nta', 'Nitab4.5_0000703g0100' => 'nta', 'Nitab4.5_0000786g0200' => 'nta', 'Nitab4.5_0001336g0020' => 'nta', 'Nitab4.5_0001796g0030' => 'nta', 'Nitab4.5_0003348g0060' => 'nta', 'Nitab4.5_0003698g0040' => 'nta', 'Nitab4.5_0003942g0090' => 'nta', 'Nitab4.5_0004775g0070' => 'nta', 'Nitab4.5_0004864g0030' => 'nta', 'Nitab4.5_0005615g0020' => 'nta', 'Nitab4.5_0009288g0030' => 'nta', 'Nitab4.5_0009341g0010' => 'nta', 'Nitab4.5_0009535g0010' => 'nta', 'Nn1g03995' => 'nnu', 'Nn1g04100' => 'nnu', 'Nn1g06530' => 'nnu', 'Nn3g16404' => 'nnu', 'Nn3g17212' => 'nnu', 'Nn3g20776' => 'nnu', 'Nn3g21923' => 'nnu', 'Nn5g27737' => 'nnu', 'Nn5g29461' => 'nnu', 'Nn7g38355' => 'nnu', 'Nn8g39873' => 'nnu', 'Oeu000548.2' => 'oeu', 'Oeu004672.1' => 'oeu', 'Oeu015605.2' => 'oeu', 'Oeu016092.1' => 'oeu', 'Oeu017879.3' => 'oeu', 'Oeu024910.1' => 'oeu', 'Oeu028965.1' => 'oeu', 'Oeu031269.1' => 'oeu', 'Oeu031270.1' => 'oeu', 'Oeu032535.1' => 'oeu', 'Oeu034151.1' => 'oeu', 'Oeu034152.1' => 'oeu', 'Oeu034588.2' => 'oeu', 'Oeu050846.1' => 'oeu', 'Oeu050849.2' => 'oeu', 'Oeu051063.2' => 'oeu', 'Oeu052368.1' => 'oeu', 'Oeu052370.1' => 'oeu', 'Os01g0210400' => 'osa', 'Os01g0304300' => 'osa', 'Os01g0749100' => 'osa', 'Os02g0745800' => 'osa', 'Os03g0769050' => 'osa', 'Os05g0531500' => 'osa', 'Os06g0724300' => 'osa', 'Os11g0198100' => 'osa', 'Peaxi162Scf00069g01425' => 'pax', 'Peaxi162Scf00280g00811' => 'pax', 'Peaxi162Scf00310g00615' => 'pax', 'Peaxi162Scf00362g00542' => 'pax', 'Peaxi162Scf00461g00310' => 'pax', 'Peaxi162Scf00530g00118' => 'pax', 'Peaxi162Scf00541g00057' => 'pax', 'Peaxi162Scf00661g00017' => 'pax', 'Peaxi162Scf00926g00027' => 'pax', 'Peaxi162Scf01064g00263' => 'pax', 'Peaxi162Scf01211g00135' => 'pax', 'PGR004G2336' => 'pgr', 'PGR042G0327' => 'pgr', 'PGR042G1957' => 'pgr', 'PGR042G2003' => 'pgr', 'PGR042G3929' => 'pgr', 'PGR083G1137' => 'pgr', 'PGR083G1364' => 'pgr', 'PGSC0003DMG400003381' => 'stu', 'PGSC0003DMG400003417' => 'stu', 'PGSC0003DMG400008981' => 'stu', 'PGSC0003DMG400012417' => 'stu', 'PGSC0003DMG400012823' => 'stu', 'PGSC0003DMG400016885' => 'stu', 'PGSC0003DMG400022812' => 'stu', 'PGSC0003DMG400029726' => 'stu', 'PGSC0003DMG401009243' => 'stu', 'PGSC0003DMG401031505' => 'stu', 'PGSC0003DMG402031505' => 'stu', 'Phvul.001G017600' => 'pvu', 'Phvul.002G193500' => 'pvu', 'Phvul.002G228900' => 'pvu', 'Phvul.002G236800' => 'pvu', 'Phvul.003G049500' => 'pvu', 'Phvul.005G072000' => 'pvu', 'Phvul.006G164800' => 'pvu', 'Phvul.006G185100' => 'pvu', 'Phvul.007G090000' => 'pvu', 'Potri.001G399800' => 'ptr', 'Potri.002G149900' => 'ptr', 'Potri.004G044100' => 'ptr', 'Potri.004G177600' => 'ptr', 'Potri.009G138000' => 'ptr', 'Potri.010G094000' => 'ptr', 'Potri.011G053000' => 'ptr', 'Potri.011G119300' => 'ptr', 'Potri.013G113700' => 'ptr', 'Potri.018G107800' => 'ptr', 'Potri.019G084100' => 'ptr', 'Pp3c14_23720' => 'ppa', 'Pp3c16_6340' => 'ppa', 'Pp3c23_13420' => 'ppa', 'Pp3c24_2740' => 'ppa', 'Pp3c25_860' => 'ppa', 'Pp3c8_21750' => 'ppa', 'Prupe.1G273000' => 'ppe', 'Prupe.1G273700' => 'ppe', 'Prupe.1G274100' => 'ppe', 'Prupe.2G023300' => 'ppe', 'Prupe.4G048000' => 'ppe', 'Prupe.4G080400' => 'ppe', 'Prupe.4G181200' => 'ppe', 'Prupe.8G056900' => 'ppe', 'Prupe.8G168700' => 'ppe', 'Psat1g189080' => 'psa', 'Psat1g204760' => 'psa', 'Psat4g175560' => 'psa', 'Psat4g177720' => 'psa', 'Psat5g244240' => 'psa', 'Psat6g010720' => 'psa', 'Psat6g187200' => 'psa', 'Psat7g072040' => 'psa', 'PSO017G3501' => 'pso', 'PSO063G2148' => 'pso', 'PSO063G5608' => 'pso', 'PSO210G6392' => 'pso', 'PSO541G2319' => 'pso', 'PSO541G2836' => 'pso', 'PSO541G4012' => 'pso', 'PSO541G6253' => 'pso', 'PSO675G0580' => 'pso', 'PSO675G0856' => 'pso', 'PSO675G5635' => 'pso', 'PSO675G9157' => 'pso', 'PSO832G1660' => 'pso', 'PSO832G1969' => 'pso', 'QL02p007186' => 'qlo', 'QL02p033904' => 'qlo', 'QL03p064391' => 'qlo', 'QL05p040593' => 'qlo', 'QL05p058242' => 'qlo', 'QL08p021825' => 'qlo', 'QL11p004981' => 'qlo', 'RcHm_v2.0_Chr1g0318301' => 'rch', 'RcHm_v2.0_Chr4g0418501' => 'rch', 'RcHm_v2.0_Chr4g0439971' => 'rch', 'RcHm_v2.0_Chr5g0008541' => 'rch', 'RcHm_v2.0_Chr5g0014101' => 'rch', 'RcHm_v2.0_Chr5g0014131' => 'rch', 'RcHm_v2.0_Chr5g0033621' => 'rch', 'RcHm_v2.0_Chr6g0272041' => 'rch', 'RcHm_v2.0_Chr6g0278831' => 'rch', 'Rhsim02G0130400' => 'rsi', 'Rhsim02G0171100' => 'rsi', 'Rhsim05G0053000' => 'rsi', 'Rhsim05G0053100' => 'rsi', 'Rhsim06G0096500' => 'rsi', 'Rhsim06G0096600' => 'rsi', 'Rhsim06G0199100' => 'rsi', 'Rhsim12G0062300' => 'rsi', 'Rhsim12G0062800' => 'rsi', 'Sabra02G0118600' => 'sbr', 'Sabra04G0027300' => 'sbr', 'Sabra04G0119500' => 'sbr', 'Sabra08G0112500' => 'sbr', 'Sabra11G0036800' => 'sbr', 'Sabra11G0103800' => 'sbr', 'Sabra13G0096300' => 'sbr', 'Sabra16G0262300' => 'sbr', 'Sabra18G0091700' => 'sbr', 'Sabra19G0095400' => 'sbr', 'SalBow6G3080' => 'sbo', 'SalBow7G1157' => 'sbo', 'SalBow7G2123' => 'sbo', 'SalBow7G2285' => 'sbo', 'SalBow7G3537' => 'sbo', 'SalBow8G2947' => 'sbo', 'SalBow8G4463' => 'sbo', 'SalBow8G5466' => 'sbo', 'Sc01g0001750' => 'sci', 'Sc02g0006640' => 'sci', 'Sc02g0006670' => 'sci', 'Sc04g0008220' => 'sci', 'Sc05g0006190' => 'sci', 'Sc08g0002760' => 'sci', 'Sc17g0006170' => 'sci', 'Sc22g0002050' => 'sci', 'Sc23g0001190' => 'sci', 'Sc24g0000980' => 'sci', 'Sed0006245' => 'sed', 'Sed0007543' => 'sed', 'Sed0009411' => 'sed', 'Sed0010765' => 'sed', 'Sed0012944' => 'sed', 'Sed0014682' => 'sed', 'Sed0016174' => 'sed', 'Sed0016796' => 'sed', 'Sed0020317' => 'sed', 'Sed0021467' => 'sed', 'SEGI_01316' => 'sgi', 'SEGI_03374' => 'sgi', 'SEGI_16265' => 'sgi', 'SEGI_18569' => 'sgi', 'SEGI_20351' => 'sgi', 'SEGI_26395' => 'sgi', 'SEGI_29469' => 'sgi', 'SEGI_34771' => 'sgi', 'SEGI_36769' => 'sgi', 'SEGI_37139' => 'sgi', 'SGA_v2.0_scaffold100G29687' => 'sas', 'SGA_v2.0_scaffold118G32472' => 'sas', 'SGA_v2.0_scaffold14G07051' => 'sas', 'SGA_v2.0_scaffold183G39845' => 'sas', 'SGA_v2.0_scaffold1G00174' => 'sas', 'SGA_v2.0_scaffold22G09714' => 'sas', 'SGA_v2.0_scaffold333G48992' => 'sas', 'SGA_v2.0_scaffold46G17491' => 'sas', 'SGA_v2.0_scaffold49G18294' => 'sas', 'SGA_v2.0_scaffold63G21658' => 'sas', 'SHI01741' => 'shi', 'SHI05771' => 'shi', 'SHI18077' => 'shi', 'SHI20525' => 'shi', 'SHI20527' => 'shi', 'SHI20528' => 'shi', 'SMO172G0185' => 'smo', 'SMO198G0020' => 'smo', 'SMO351G0006' => 'smo', 'SMO356G0118' => 'smo', 'SMO358G0296' => 'smo', 'SMO367G0079' => 'smo', 'SMO367G1277' => 'smo', 'Solyc01g014220.3' => 'sly', 'Solyc01g111770.2' => 'sly', 'Solyc02g078180.3' => 'sly', 'Solyc03g006430.3' => 'sly', 'Solyc03g006456.1' => 'sly', 'Solyc03g079860.2' => 'sly', 'Solyc04g079770.3' => 'sly', 'Solyc05g007430.4' => 'sly', 'Solyc07g063150.3' => 'sly', 'Solyc08g016620.3' => 'sly', 'Solyc09g057590.3' => 'sly', 'Solyc09g057600.1' => 'sly', 'Solyc10g009050.3' => 'sly', 'Solyc11g017420.2' => 'sly', 'Sopen01g053810' => 'spe', 'Sopen02g023040' => 'spe', 'Sopen03g002440' => 'spe', 'Sopen04g033350' => 'spe', 'Sopen05g003310' => 'spe', 'Sopen07g004050' => 'spe', 'Sopen07g031340' => 'spe', 'Sopen08g006990' => 'spe', 'Sopen10g004830' => 'spe', 'Sopen11g009370' => 'spe', 'Sp1g24450' => 'spa', 'Sp1g29670' => 'spa', 'Sp1g39600' => 'spa', 'Sp2g11080' => 'spa', 'Sp2g13970' => 'spa', 'Sp4g16130' => 'spa', 'Sp6g13080' => 'spa', 'Sp7g37270' => 'spa', 'TAR371G0065' => 'tar', 'TAR376G0340' => 'tar', 'TAR376G0435' => 'tar', 'TAR381G0002' => 'tar', 'TAR381G1236' => 'tar', 'TAR624G0055' => 'tar', 'TAR624G0324' => 'tar', 'TAR624G0696' => 'tar', 'TAR624G0906' => 'tar', 'TAR625G0107' => 'tar', 'TAR626G0015' => 'tar', 'TAR626G1356' => 'tar', 'TAR627G0888' => 'tar', 'TAR628G0399' => 'tar', 'TAR628G1327' => 'tar', 'TAR629G2831' => 'tar', 'TAR629G2874' => 'tar', 'TAR633G1432' => 'tar', 'TAR633G2771' => 'tar', 'THA.LOC104803394' => 'tha', 'THA.LOC104805153' => 'tha', 'THA.LOC104806784' => 'tha', 'THA.LOC104810473' => 'tha', 'THA.LOC104813100' => 'tha', 'THA.LOC104814215' => 'tha', 'THA.LOC104815554' => 'tha', 'THA.LOC104820544' => 'tha', 'THA.LOC104824754' => 'tha', 'THA.LOC104827717' => 'tha', 'Thecc.02G031400' => 'tca', 'Thecc.02G055900' => 'tca', 'Thecc.02G350800' => 'tca', 'Thecc.06G150900' => 'tca', 'Thecc.06G186600' => 'tca', 'Thecc.07G089600' => 'tca', 'Thecc.08G020400' => 'tca', 'Thecc.08G182100' => 'tca', 'Thhalv10000873m.g' => 'esa', 'Thhalv10004185m.g' => 'esa', 'Thhalv10006981m.g' => 'esa', 'Thhalv10007204m.g' => 'esa', 'Thhalv10011374m.g' => 'esa', 'Thhalv10013482m.g' => 'esa', 'Thhalv10017801m.g' => 'esa', 'Thhalv10024983m.g' => 'esa', 'TPR.G12072' => 'tpr', 'TPR.G15769' => 'tpr', 'TPR.G16504' => 'tpr', 'TPR.G16506' => 'tpr', 'TPR.G24345' => 'tpr', 'TPR.G26666' => 'tpr', 'TPR.G27320' => 'tpr', 'TPR.G31819' => 'tpr', 'TPR.G38879' => 'tpr', 'TPR.G39015' => 'tpr', 'TPR.G8819' => 'tpr', 'TWI09G0924' => 'twi', 'TWI12G0811' => 'twi', 'TWI12G1294' => 'twi', 'TWI31G0150' => 'twi', 'TWI36G1262' => 'twi', 'TWI38G1287' => 'twi', 'TWI38G1633' => 'twi', 'TWI38G1982' => 'twi', 'TWI39G0116' => 'twi', 'TWI60G1011' => 'twi', 'TWI63G0171' => 'twi', 'TWI73G0839' => 'twi', 'TWI79G1511' => 'twi', 'unitig_0.g915' => 'ugi', 'unitig_0.g916' => 'ugi', 'unitig_21.g20219' => 'ugi', 'unitig_21.g20416' => 'ugi', 'unitig_578.g16132' => 'ugi', 'unitig_578.g16718' => 'ugi', 'unitig_62.g23481' => 'ugi', 'unitig_744.g24535' => 'ugi', 'unitig_749.g13525' => 'ugi', 'vmacro01248' => 'vma', 'vmacro02290' => 'vma', 'vmacro10946' => 'vma', 'vmacro11865' => 'vma', 'vmacro12493' => 'vma', 'vmacro17322' => 'vma', 'vmacro21599' => 'vma', 'vmacro23041' => 'vma', 'VMungo0251G0004' => 'vmu', 'VMungo0251G2639' => 'vmu', 'VMungo0251G2967' => 'vmu', 'VMungo0540G0864' => 'vmu', 'VMungo0540G1569' => 'vmu', 'VMungo0647G0317' => 'vmu', 'VMungo0720G1373' => 'vmu', 'VMungo0720G1508' => 'vmu', 'VMungo1080G0485' => 'vmu', 'VMungo1215G3177' => 'vmu', 'Zm00001eb112600' => 'zma', 'Zm00001eb120220' => 'zma', 'Zm00001eb153240' => 'zma', 'Zm00001eb168880' => 'zma', 'Zm00001eb213920' => 'zma', 'Zm00001eb228280' => 'zma', 'Zm00001eb254580' => 'zma', 'Zm00001eb272180' => 'zma', 'Zm00001eb293190' => 'zma', 'Zm00001eb322930' => 'zma', 'Zm00001eb353360' => 'zma', 'Zm00001eb353390' => 'zma', 'Zm00001eb353430' => 'zma', 'Zm00001eb353440' => 'zma', 'Zm00001eb353780' => 'zma' ), 'gf_id' => 'HOM05D000499', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000499' ), 'data_identifier' => 'HOM05D000499', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000499', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1066', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p29780' => 'bna', 'A02p33180' => 'bna', 'A03p16470' => 'bna', 'A03p66010' => 'bna', 'A04p25970' => 'bna', 'A06p01270' => 'bna', 'A06p46080' => 'bna', 'A07p11400' => 'bna', 'A08p01840' => 'bna', 'A08p08230' => 'bna', 'A08p25740' => 'bna', 'A09p32070' => 'bna', 'A09p37830' => 'bna', 'A09p42840' => 'bna', 'A09p42850' => 'bna', 'Aa31LG10G2060' => 'aar', 'Aa31LG2G7410' => 'aar', 'Aa31LG6G10200' => 'aar', 'Aa31LG6G16680' => 'aar', 'Aa31LG6G8470' => 'aar', 'Aa31LG9G12730' => 'aar', 'Aa31LG9G13680' => 'aar', 'Aa31LG9G14920' => 'aar', 'Aa31LG9G6650' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4977' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5467' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3254' => 'aag', 'Actinidia02578' => 'ach', 'Actinidia07693' => 'ach', 'Actinidia08413' => 'ach', 'Actinidia08414' => 'ach', 'Actinidia15289' => 'ach', 'Actinidia19871' => 'ach', 'Actinidia21475' => 'ach', 'Actinidia22576' => 'ach', 'Actinidia28327' => 'ach', 'Actinidia32491' => 'ach', 'Actinidia39463' => 'ach', 'Actinidia39571' => 'ach', 'Ah.01g013750' => 'amhyb', 'Ah.01g023210' => 'amhyb', 'Ah.04g164850' => 'amhyb', 'Ah.05g178060' => 'amhyb', 'Ah.07g204270' => 'amhyb', 'Ah.07g208480' => 'amhyb', 'Ah.09g237410' => 'amhyb', 'Ah.14g089460' => 'amhyb', 'AL1G41790' => 'aly', 'AL1G49050' => 'aly', 'AL1G53810' => 'aly', 'AL1G61400' => 'aly', 'AL4G18580' => 'aly', 'AL5G12510' => 'aly', 'AL5G12540' => 'aly', 'AL6G43230' => 'aly', 'AL7G10370' => 'aly', 'AL7G19250' => 'aly', 'AL8G12240' => 'aly', 'AL8G18540' => 'aly', 'Aqoxy1G02409' => 'aox', 'Aqoxy2G03993' => 'aox', 'Aqoxy3G03357' => 'aox', 'Aqoxy4G00785' => 'aox', 'Aqoxy5G02598' => 'aox', 'Aqoxy6G00132' => 'aox', 'Aqoxy7G01776' => 'aox', 'Aqoxy7G02316' => 'aox', 'Aqoxy7G03973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.12AFKW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B8730' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27IQR1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3F75VG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3RE0GA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41TCQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.527VTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FIR39' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5W8UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DA38EV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ63HS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H1I32C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HC27T5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4M8AP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7N3CZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9UVDZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LS1NQA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT1D4B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SKC4TM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCFV76' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF9Q1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQWD9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1ZM88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WE07RT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YCK7VH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJE6Q6' => 'arhy', 'AT1G28240' => 'ath', 'AT1G34550' => 'ath', 'AT1G53040' => 'ath', 'AT2G02910' => 'ath', 'AT4G09630' => 'ath', 'AT4G38500' => 'ath', 'AT5G42660' => 'ath', 'AT5G46220' => 'ath', 'ATR0152G026' => 'atr', 'ATR0564G343' => 'atr', 'ATR0706G151' => 'atr', 'ATR0733G207' => 'atr', 'ATR0751G234' => 'atr', 'ATR0807G048' => 'atr', 'ATR1091G084' => 'atr', 'Atru.chr10.1229' => 'acertr', 'Atru.chr10.1230' => 'acertr', 'Atru.chr10.1874' => 'acertr', 'Atru.chr11.1808' => 'acertr', 'Atru.chr13.1795' => 'acertr', 'Atru.chr13.570' => 'acertr', 'Atru.chr2.2608' => 'acertr', 'Atru.chr2.2609' => 'acertr', 'Atru.chr5.3428' => 'acertr', 'Atru.chr8.1171' => 'acertr', 'AUR62004651' => 'cqu', 'AUR62008675' => 'cqu', 'AUR62010014' => 'cqu', 'AUR62013004' => 'cqu', 'AUR62014825' => 'cqu', 'AUR62015015' => 'cqu', 'AUR62015151' => 'cqu', 'AUR62017020' => 'cqu', 'AUR62019422' => 'cqu', 'AUR62023570' => 'cqu', 'AUR62025571' => 'cqu', 'AUR62029098' => 'cqu', 'AUR62033863' => 'cqu', 'AUR62034296' => 'cqu', 'AUR62040075' => 'cqu', 'BcaB02g07334' => 'bca', 'BcaB02g10575' => 'bca', 'BcaB03g12119' => 'bca', 'BcaB03g12120' => 'bca', 'BcaB03g13945' => 'bca', 'BcaB04g17123' => 'bca', 'BcaB04g17867' => 'bca', 'BcaB04g19839' => 'bca', 'BcaB07g30317' => 'bca', 'BcaB07g32432' => 'bca', 'BcaB07g33362' => 'bca', 'BcaB08g36611' => 'bca', 'BcaC01g00028' => 'bca', 'BcaC01g01356' => 'bca', 'BcaC01g02034' => 'bca', 'BcaC01g06051' => 'bca', 'BcaC03g16839' => 'bca', 'BcaC03g17176' => 'bca', 'BcaC05g26829' => 'bca', 'BcaC06g31490' => 'bca', 'BcaC06g35344' => 'bca', 'BcaC06g36570' => 'bca', 'BcaC07g37537' => 'bca', 'BcaC08g43491' => 'bca', 'BcaC08g43773' => 'bca', 'BcaNung00234' => 'bca', 'BcaNung01982' => 'bca', 'BcaNung03707' => 'bca', 'BcaNung06454' => 'bca', 'BolC2t10762H' => 'bol', 'BolC2t11191H' => 'bol', 'BolC3t14322H' => 'bol', 'BolC3t19747H' => 'bol', 'BolC3t21425H' => 'bol', 'BolC4t27800H' => 'bol', 'BolC5t31423H' => 'bol', 'BolC6t35951H' => 'bol', 'BolC6t36282H' => 'bol', 'BolC7t40678H' => 'bol', 'BolC7t40679H' => 'bol', 'BolC7t42222H' => 'bol', 'BolC7t43492H' => 'bol', 'BolC7t46785H' => 'bol', 'BolC8t47853H' => 'bol', 'BolC9t56805H' => 'bol', 'BraA02t08000Z' => 'bra', 'BraA02t08341Z' => 'bra', 'BraA03t10936Z' => 'bra', 'BraA03t15657Z' => 'bra', 'BraA04t18100Z' => 'bra', 'BraA05t20523Z' => 'bra', 'BraA06t23353Z' => 'bra', 'BraA06t27473Z' => 'bra', 'BraA06t27769Z' => 'bra', 'BraA07t28928Z' => 'bra', 'BraA08t32236Z' => 'bra', 'BraA08t32841Z' => 'bra', 'BraA08t34524Z' => 'bra', 'BraA09t38742Z' => 'bra', 'BraA09t39295Z' => 'bra', 'C02p47180' => 'bna', 'C02p50990' => 'bna', 'C03p19360' => 'bna', 'C03p74950' => 'bna', 'C03p91000' => 'bna', 'C04p63260' => 'bna', 'C05p27050' => 'bna', 'C06p08750' => 'bna', 'C06p11490' => 'bna', 'C07p02820' => 'bna', 'C07p17180' => 'bna', 'C07p29440' => 'bna', 'C07p63730' => 'bna', 'C09p39260' => 'bna', 'CAN.G1164.34' => 'can', 'CAN.G1164.39' => 'can', 'CAN.G1530.3' => 'can', 'CAN.G162.61' => 'can', 'CAN.G176.6' => 'can', 'CAN.G289.49' => 'can', 'CAN.G370.21' => 'can', 'CAN.G370.22' => 'can', 'CAN.G371.117' => 'can', 'CAN.G58.37' => 'can', 'CAN.G588.98' => 'can', 'CANSAT21G2266' => 'cansat', 'CANSAT25G2799' => 'cansat', 'CANSAT35G0862' => 'cansat', 'CANSAT35G1704' => 'cansat', 'CANSAT35G1760' => 'cansat', 'CANSAT56G3971' => 'cansat', 'CANSAT56G4116' => 'cansat', 'CANSAT80G1259' => 'cansat', 'CARHR027730' => 'chi', 'CARHR033880' => 'chi', 'CARHR043270' => 'chi', 'CARHR145330' => 'chi', 'CARHR145340' => 'chi', 'CARHR175570' => 'chi', 'CARHR181570' => 'chi', 'CARHR258470' => 'chi', 'CARHR260490' => 'chi', 'CARHR294220' => 'chi', 'Carub.0001s2668' => 'cru', 'Carub.0001s3257' => 'cru', 'Carub.0001s4220' => 'cru', 'Carub.0005s0179' => 'cru', 'Carub.0006s2807' => 'cru', 'Carub.0007s0039' => 'cru', 'Carub.0008s0169' => 'cru', 'Carub.0008s0636' => 'cru', 'Ca_00338_v3' => 'car', 'Ca_00542_v3' => 'car', 'Ca_01844_v3' => 'car', 'Ca_10611_v3' => 'car', 'Ca_13326_v3' => 'car', 'Ca_17944_v3' => 'car', 'Ca_18546_v3' => 'car', 'Ca_24219_v3' => 'car', 'Ca_29972_v3' => 'car', 'CBR_g3681' => 'cbr', 'CBR_g40021' => 'cbr', 'Cc01_g08140' => 'ccan', 'Cc02_g13410' => 'ccan', 'Cc02_g37480' => 'ccan', 'Cc05_g12030' => 'ccan', 'Cc09_g03370' => 'ccan', 'Cc09_g10300' => 'ccan', 'Cc10_g03530' => 'ccan', 'Cc10_g11380' => 'ccan', 'CDE01G0176' => 'cde', 'CDE02G0675' => 'cde', 'CDE02G0942' => 'cde', 'CDE02G1153' => 'cde', 'CDE02G4177' => 'cde', 'CDE04G2117' => 'cde', 'CDE04G2736' => 'cde', 'CDE08G1161' => 'cde', 'CDE09G1238' => 'cde', 'Cfa000467' => 'cfa', 'Cfa000947' => 'cfa', 'Cfa004969' => 'cfa', 'Cfa005284' => 'cfa', 'Cfa008993' => 'cfa', 'Cfa018187' => 'cfa', 'Cfa018454' => 'cfa', 'Cfa020585' => 'cfa', 'Ciclev10000424m.g' => 'ccl', 'Ciclev10003605m.g' => 'ccl', 'Ciclev10007828m.g' => 'ccl', 'Ciclev10014620m.g' => 'ccl', 'Ciclev10015169m.g' => 'ccl', 'Ciclev10018291m.g' => 'ccl', 'Ciclev10028256m.g' => 'ccl', 'Ciclev10033822m.g' => 'ccl', 'CiPaw.05G060300' => 'cil', 'CiPaw.05G085000' => 'cil', 'CiPaw.06G083700' => 'cil', 'CiPaw.06G120300' => 'cil', 'CiPaw.09G060500' => 'cil', 'CiPaw.09G123800' => 'cil', 'CiPaw.11G169700' => 'cil', 'CiPaw.12G118300' => 'cil', 'CiPaw.15G071000' => 'cil', 'CiPaw.15G081900' => 'cil', 'ClCG01G024610' => 'cla', 'ClCG03G006070' => 'cla', 'ClCG05G019250' => 'cla', 'ClCG09G009500' => 'cla', 'ClCG11G008200' => 'cla', 'ClCG11G018080' => 'cla', 'COL.COLO4_17373' => 'col', 'COL.COLO4_22994' => 'col', 'COL.COLO4_26389' => 'col', 'COL.COLO4_27170' => 'col', 'COL.COLO4_31074' => 'col', 'COL.COLO4_31465' => 'col', 'COL.COLO4_36438' => 'col', 'COL.COLO4_36439' => 'col', 'Cpa.g.c38781' => 'cpa', 'Cpa.g.sc128.12' => 'cpa', 'Cpa.g.sc166.7' => 'cpa', 'Cpa.g.sc166.8' => 'cpa', 'Cpa.g.sc20.111' => 'cpa', 'Cpa.g.sc27.31' => 'cpa', 'Cpa.g.sc64.36' => 'cpa', 'Cpa.g.sc64.37' => 'cpa', 'Cpa.g.sc66.49' => 'cpa', 'Cpa.g.sc80.64' => 'cpa', 'CsaV3_1G012320' => 'csa', 'CsaV3_2G008480' => 'csa', 'CsaV3_2G033450' => 'csa', 'CsaV3_3G044830' => 'csa', 'CsaV3_4G033710' => 'csa', 'CsaV3_6G051730' => 'csa', 'CsaV3_7G025350' => 'csa', 'CSS0001067' => 'camsi', 'CSS0005996' => 'camsi', 'CSS0006590' => 'camsi', 'CSS0009673' => 'camsi', 'CSS0010201' => 'camsi', 'CSS0010549' => 'camsi', 'CSS0011364' => 'camsi', 'CSS0014473' => 'camsi', 'CSS0014961' => 'camsi', 'CSS0020191' => 'camsi', 'CSS0021165' => 'camsi', 'CSS0022306' => 'camsi', 'CSS0030591' => 'camsi', 'CSS0030696' => 'camsi', 'CSS0032653' => 'camsi', 'CSS0037487' => 'camsi', 'CSS0041102' => 'camsi', 'CSS0041261' => 'camsi', 'CSS0046246' => 'camsi', 'CSS0049256' => 'camsi', 'DCAR_004075' => 'dca', 'DCAR_011538' => 'dca', 'DCAR_019553' => 'dca', 'DCAR_020952' => 'dca', 'DCAR_021739' => 'dca', 'DCAR_027407' => 'dca', 'DCAR_027913' => 'dca', 'DCAR_028066' => 'dca', 'Dinv05899' => 'din', 'Dinv07563' => 'din', 'Dinv08010' => 'din', 'Dinv14125' => 'din', 'Dinv20172' => 'din', 'Dinv30743' => 'din', 'Dinv31229' => 'din', 'Dinv34162' => 'din', 'Dinv36028' => 'din', 'Dinv39368' => 'din', 'Dinv40565' => 'din', 'Dinv41706' => 'din', 'Duzib052G0089' => 'dzi', 'Duzib116G0641' => 'dzi', 'Duzib132G0069' => 'dzi', 'Duzib132G1219' => 'dzi', 'Duzib147G0278' => 'dzi', 'Duzib160G0480' => 'dzi', 'Duzib170G0661' => 'dzi', 'Duzib177G0591' => 'dzi', 'Duzib187G1353' => 'dzi', 'Duzib192G0858' => 'dzi', 'Duzib192G0883' => 'dzi', 'Duzib213G0506' => 'dzi', 'Duzib235G0289' => 'dzi', 'Duzib251G0422' => 'dzi', 'ECA232G3898' => 'eca', 'ECA233G5950' => 'eca', 'ECA234G1699' => 'eca', 'ECA234G2421' => 'eca', 'ECA236G0426' => 'eca', 'ECA236G4331' => 'eca', 'ECA248G2573' => 'eca', 'EL10Ac1g00077' => 'bvu', 'EL10Ac1g01746' => 'bvu', 'EL10Ac2g03464' => 'bvu', 'EL10Ac4g08176' => 'bvu', 'EL10Ac7g17521' => 'bvu', 'EL10Ac8g20386' => 'bvu', 'EL10Ac9g21343' => 'bvu', 'EL10Ac9g22688' => 'bvu', 'Eucgr.B03434' => 'egr', 'Eucgr.D00618' => 'egr', 'Eucgr.E02395' => 'egr', 'Eucgr.F01129' => 'egr', 'Eucgr.F02622' => 'egr', 'Eucgr.F04207' => 'egr', 'FAN01G0570' => 'fan', 'FAN03G3351' => 'fan', 'FAN06G3702' => 'fan', 'FAN07G2149' => 'fan', 'FAN10G3758' => 'fan', 'FAN11G1170' => 'fan', 'FAN11G2050' => 'fan', 'FAN11G2724' => 'fan', 'FAN12G1700' => 'fan', 'FAN12G2028' => 'fan', 'FAN15G1160' => 'fan', 'FAN15G3063' => 'fan', 'FAN16G2540' => 'fan', 'FAN16G3077' => 'fan', 'FAN16G3624' => 'fan', 'FAN17G0221' => 'fan', 'FAN20G2492' => 'fan', 'FAN20G2905' => 'fan', 'FAN21G0548' => 'fan', 'FAN21G1300' => 'fan', 'FAN22G0077' => 'fan', 'FAN22G1315' => 'fan', 'FAN24G1280' => 'fan', 'FAN24G1445' => 'fan', 'FAN24G3527' => 'fan', 'FAN25G0464' => 'fan', 'FAN25G2885' => 'fan', 'FAN25G3270' => 'fan', 'FAN27G1101' => 'fan', 'FAN27G2846' => 'fan', 'FAN27G3524' => 'fan', 'FvH4_2g11770' => 'fve', 'FvH4_2g15630' => 'fve', 'FvH4_3g05570' => 'fve', 'FvH4_3g09110' => 'fve', 'FvH4_3g19940' => 'fve', 'FvH4_4g04821' => 'fve', 'FvH4_4g31480' => 'fve', 'FvH4_7g01740' => 'fve', 'Glyma.05G130400' => 'gma', 'Glyma.05G156400' => 'gma', 'Glyma.07G197000' => 'gma', 'Glyma.08G085151' => 'gma', 'Glyma.08G114500' => 'gma', 'Glyma.08G300400' => 'gma', 'Glyma.10G215800' => 'gma', 'Glyma.12G224400' => 'gma', 'Glyma.13G179300' => 'gma', 'Glyma.13G218151' => 'gma', 'Glyma.13G238800' => 'gma', 'Glyma.13G276900' => 'gma', 'Glyma.14G078200' => 'gma', 'Glyma.15G074500' => 'gma', 'Glyma.15G094100' => 'gma', 'Glyma.17G247200' => 'gma', 'Glyma.18G120100' => 'gma', 'Glyma.20G176000' => 'gma', 'Gohir.A01G063600' => 'ghi', 'Gohir.A01G170301' => 'ghi', 'Gohir.A02G060500' => 'ghi', 'Gohir.A05G133850' => 'ghi', 'Gohir.A05G161400' => 'ghi', 'Gohir.A06G012900' => 'ghi', 'Gohir.A06G035901' => 'ghi', 'Gohir.A06G127100' => 'ghi', 'Gohir.A06G210500' => 'ghi', 'Gohir.A08G008650' => 'ghi', 'Gohir.A09G072700' => 'ghi', 'Gohir.A09G088301' => 'ghi', 'Gohir.A10G040600' => 'ghi', 'Gohir.A12G036300' => 'ghi', 'Gohir.A12G143350' => 'ghi', 'Gohir.A12G165500' => 'ghi', 'Gohir.A13G145700' => 'ghi', 'Gohir.D01G050000' => 'ghi', 'Gohir.D01G051366' => 'ghi', 'Gohir.D01G161350' => 'ghi', 'Gohir.D02G065900' => 'ghi', 'Gohir.D05G164200' => 'ghi', 'Gohir.D05G355500' => 'ghi', 'Gohir.D06G010400' => 'ghi', 'Gohir.D06G111250' => 'ghi', 'Gohir.D06G132000' => 'ghi', 'Gohir.D06G210500' => 'ghi', 'Gohir.D07G165675' => 'ghi', 'Gohir.D08G062240' => 'ghi', 'Gohir.D08G086101' => 'ghi', 'Gohir.D08G138060' => 'ghi', 'Gohir.D09G072300' => 'ghi', 'Gohir.D10G041400' => 'ghi', 'Gohir.D11G191020' => 'ghi', 'Gohir.D11G212066' => 'ghi', 'Gohir.D12G036300' => 'ghi', 'Gohir.D12G168600' => 'ghi', 'Gohir.D13G150600' => 'ghi', 'Gorai.001G057300' => 'gra', 'Gorai.002G069900' => 'gra', 'Gorai.002G200000' => 'gra', 'Gorai.003G067600' => 'gra', 'Gorai.005G074800' => 'gra', 'Gorai.006G087300' => 'gra', 'Gorai.008G037500' => 'gra', 'Gorai.008G181400' => 'gra', 'Gorai.009G169400' => 'gra', 'Gorai.009G387900' => 'gra', 'Gorai.010G013300' => 'gra', 'Gorai.010G153800' => 'gra', 'Gorai.010G255800' => 'gra', 'Gorai.011G043700' => 'gra', 'Gorai.011G198900' => 'gra', 'Gorai.013G168400' => 'gra', 'GSVIVG01005212001' => 'vvi', 'GSVIVG01006163001' => 'vvi', 'GSVIVG01009625001' => 'vvi', 'GSVIVG01014338001' => 'vvi', 'GSVIVG01020005001' => 'vvi', 'GSVIVG01021450001' => 'vvi', 'GSVIVG01023975001' => 'vvi', 'GSVIVG01034490001' => 'vvi', 'HanXRQChr04g0112071' => 'han', 'HanXRQChr05g0131151' => 'han', 'HanXRQChr09g0262371' => 'han', 'HanXRQChr09g0268401' => 'han', 'HanXRQChr10g0279241' => 'han', 'HanXRQChr10g0297961' => 'han', 'HanXRQChr11g0326231' => 'han', 'HanXRQChr11g0328471' => 'han', 'HanXRQChr16g0507941' => 'han', 'HanXRQChr17g0560211' => 'han', 'Haze_02108' => 'cav', 'Haze_02428' => 'cav', 'Haze_05593' => 'cav', 'Haze_06448' => 'cav', 'Haze_09427' => 'cav', 'Haze_12022' => 'cav', 'Haze_17612' => 'cav', 'Haze_17928' => 'cav', 'Hma1.2p1_0032F.1_g019250' => 'hma', 'Hma1.2p1_0163F.1_g072690' => 'hma', 'Hma1.2p1_0265F.1_g106710' => 'hma', 'Hma1.2p1_0286F.1_g113970' => 'hma', 'Hma1.2p1_0363F.1_g136640' => 'hma', 'Hma1.2p1_0584F.1_g183470' => 'hma', 'Hma1.2p1_0885F.1_g232570' => 'hma', 'HPP92_006022' => 'vpl', 'HPP92_007320' => 'vpl', 'HPP92_011521' => 'vpl', 'HPP92_019387' => 'vpl', 'HPP92_024038' => 'vpl', 'Hund05891' => 'sun', 'Hund06450' => 'sun', 'Hund12053' => 'sun', 'Hund16800' => 'sun', 'Hund21222' => 'sun', 'Hund22896' => 'sun', 'Hund23746' => 'sun', 'Hund27083' => 'sun', 'Lalb_Chr02g0141831' => 'lal', 'Lalb_Chr02g0141841' => 'lal', 'Lalb_Chr05g0220411' => 'lal', 'Lalb_Chr06g0162081' => 'lal', 'Lalb_Chr09g0327651' => 'lal', 'Lalb_Chr13g0295051' => 'lal', 'Lalb_Chr15g0086801' => 'lal', 'Lalb_Chr16g0383781' => 'lal', 'Lalb_Chr16g0383791' => 'lal', 'Lalb_Chr18g0055441' => 'lal', 'Lalb_Chr18g0059611' => 'lal', 'Lalb_Chr20g0109661' => 'lal', 'Lalb_Chr20g0109831' => 'lal', 'Lalb_Chr20g0121871' => 'lal', 'Lalb_Chr22g0355361' => 'lal', 'Lalb_Chr25g0286371' => 'lal', 'Lj1A1187G43' => 'lonja', 'Lj1A1205T50' => 'lonja', 'Lj1A800G33' => 'lonja', 'Lj1C1187T7' => 'lonja', 'Lj1C843T11' => 'lonja', 'Lj1g0010940' => 'lja', 'Lj2A288T69' => 'lonja', 'Lj3g0024276' => 'lja', 'Lj4A47T76' => 'lonja', 'Lj4g0005805' => 'lja', 'Lj4g0006097' => 'lja', 'Lj4g0008528' => 'lja', 'Lj4g0024907' => 'lja', 'Lj5g0012472' => 'lja', 'Lj5g0018648' => 'lja', 'Lj6C789G1' => 'lonja', 'Lj6g0004000' => 'lja', 'Lj7A292G67' => 'lonja', 'Lj7A292T64' => 'lonja', 'Lj9A400T58' => 'lonja', 'Lsat_1_v5_gn_1_126181' => 'lsa', 'Lsat_1_v5_gn_4_123041' => 'lsa', 'Lsat_1_v5_gn_4_133620' => 'lsa', 'Lsat_1_v5_gn_4_53221' => 'lsa', 'Lsat_1_v5_gn_4_71961' => 'lsa', 'Lsat_1_v5_gn_7_105241' => 'lsa', 'Lsat_1_v5_gn_7_21361' => 'lsa', 'Lsat_1_v5_gn_7_28860' => 'lsa', 'Lsat_1_v5_gn_7_31260' => 'lsa', 'Lsat_1_v5_gn_8_52801' => 'lsa', 'Manes.02G191400' => 'mes', 'Manes.03G110100' => 'mes', 'Manes.04G071100' => 'mes', 'Manes.05G100500' => 'mes', 'Manes.05G164700' => 'mes', 'Manes.15G087000' => 'mes', 'Manes.15G121500' => 'mes', 'Manes.16G028300' => 'mes', 'Manes.17G046100' => 'mes', 'Manes.17G069800' => 'mes', 'Manes.18G100500' => 'mes', 'Mapoly0002s0109' => 'mpo', 'Mapoly0024s0007' => 'mpo', 'Mapoly0089s0032' => 'mpo', 'MBI04_g42241_MAGBIO' => 'mbi', 'MBI05_g11988_MAGBIO' => 'mbi', 'MBI05_g35452_MAGBIO' => 'mbi', 'MBI07_g30179_MAGBIO' => 'mbi', 'MBI07_g35859_MAGBIO' => 'mbi', 'MBI07_g35860_MAGBIO' => 'mbi', 'MBI07_g37166_MAGBIO' => 'mbi', 'MBI08_g18172_MAGBIO' => 'mbi', 'MBI09_g08441_MAGBIO' => 'mbi', 'MBI13_g01676_MAGBIO' => 'mbi', 'MBI14_g42955_MAGBIO' => 'mbi', 'MBI16_g13161_MAGBIO' => 'mbi', 'MBI17_g27204_MAGBIO' => 'mbi', 'MBI19_g21595_MAGBIO' => 'mbi', 'MD00G1148400' => 'mdo', 'MD02G1301200' => 'mdo', 'MD03G1227800' => 'mdo', 'MD05G1041100' => 'mdo', 'MD05G1124800' => 'mdo', 'MD05G1284000' => 'mdo', 'MD05G1338800' => 'mdo', 'MD05G1338900' => 'mdo', 'MD07G1022800' => 'mdo', 'MD10G1047500' => 'mdo', 'MD10G1127500' => 'mdo', 'MD10G1262300' => 'mdo', 'MD10G1293800' => 'mdo', 'MD16G1074300' => 'mdo', 'Medtr1g021670' => 'mtr', 'Medtr1g096320' => 'mtr', 'Medtr2g013690' => 'mtr', 'Medtr2g019450' => 'mtr', 'Medtr2g085170' => 'mtr', 'Medtr4g088785' => 'mtr', 'Medtr8g055930' => 'mtr', 'Medtr8g085850' => 'mtr', 'MELO3C002605.2' => 'cme', 'MELO3C003891.2' => 'cme', 'MELO3C004012.2' => 'cme', 'MELO3C007134.2' => 'cme', 'MELO3C008118.2' => 'cme', 'MELO3C016700.2' => 'cme', 'MELO3C024127.2' => 'cme', 'MELO3C033361.2' => 'cme', 'MELO3C033362.2' => 'cme', 'Migut.C00430' => 'egut', 'Migut.C01246' => 'egut', 'Migut.E00101' => 'egut', 'Migut.H01486' => 'egut', 'Migut.H01939' => 'egut', 'Migut.K00360' => 'egut', 'Migut.M00910' => 'egut', 'Migut.M01139' => 'egut', 'Migut.N02677' => 'egut', 'MSTRG.13252' => 'ama', 'MSTRG.14701' => 'ama', 'MSTRG.1521' => 'ama', 'MSTRG.15884' => 'ama', 'MSTRG.16242' => 'ama', 'MSTRG.22285' => 'ama', 'MSTRG.22444' => 'ama', 'MSTRG.2349' => 'ama', 'MSTRG.26308' => 'ama', 'MSTRG.28296' => 'ama', 'MSTRG.9895' => 'ama', 'Nitab4.5_0000110g0060' => 'nta', 'Nitab4.5_0000420g0130' => 'nta', 'Nitab4.5_0000422g0030' => 'nta', 'Nitab4.5_0000560g0180' => 'nta', 'Nitab4.5_0000703g0100' => 'nta', 'Nitab4.5_0000786g0200' => 'nta', 'Nitab4.5_0001336g0020' => 'nta', 'Nitab4.5_0001796g0030' => 'nta', 'Nitab4.5_0003348g0060' => 'nta', 'Nitab4.5_0003698g0040' => 'nta', 'Nitab4.5_0003942g0090' => 'nta', 'Nitab4.5_0004775g0070' => 'nta', 'Nitab4.5_0004864g0030' => 'nta', 'Nitab4.5_0005615g0020' => 'nta', 'Nitab4.5_0009288g0030' => 'nta', 'Nitab4.5_0009341g0010' => 'nta', 'Nitab4.5_0009535g0010' => 'nta', 'Nn1g03995' => 'nnu', 'Nn1g04100' => 'nnu', 'Nn1g06530' => 'nnu', 'Nn3g16404' => 'nnu', 'Nn3g17212' => 'nnu', 'Nn3g20776' => 'nnu', 'Nn3g21923' => 'nnu', 'Nn5g27737' => 'nnu', 'Nn5g29461' => 'nnu', 'Nn7g38355' => 'nnu', 'Nn8g39873' => 'nnu', 'Oeu000548.2' => 'oeu', 'Oeu004672.1' => 'oeu', 'Oeu015605.2' => 'oeu', 'Oeu016092.1' => 'oeu', 'Oeu017879.3' => 'oeu', 'Oeu024910.1' => 'oeu', 'Oeu028965.1' => 'oeu', 'Oeu031269.1' => 'oeu', 'Oeu031270.1' => 'oeu', 'Oeu032535.1' => 'oeu', 'Oeu034151.1' => 'oeu', 'Oeu034152.1' => 'oeu', 'Oeu034588.2' => 'oeu', 'Oeu050846.1' => 'oeu', 'Oeu050849.2' => 'oeu', 'Oeu051063.2' => 'oeu', 'Oeu052368.1' => 'oeu', 'Oeu052370.1' => 'oeu', 'Os01g0210400' => 'osa', 'Os01g0304300' => 'osa', 'Os01g0749100' => 'osa', 'Os02g0745800' => 'osa', 'Os03g0769050' => 'osa', 'Os05g0531500' => 'osa', 'Os06g0724300' => 'osa', 'Os11g0198100' => 'osa', 'Peaxi162Scf00069g01425' => 'pax', 'Peaxi162Scf00280g00811' => 'pax', 'Peaxi162Scf00310g00615' => 'pax', 'Peaxi162Scf00362g00542' => 'pax', 'Peaxi162Scf00461g00310' => 'pax', 'Peaxi162Scf00530g00118' => 'pax', 'Peaxi162Scf00541g00057' => 'pax', 'Peaxi162Scf00661g00017' => 'pax', 'Peaxi162Scf00926g00027' => 'pax', 'Peaxi162Scf01064g00263' => 'pax', 'Peaxi162Scf01211g00135' => 'pax', 'PGR004G2336' => 'pgr', 'PGR042G0327' => 'pgr', 'PGR042G1957' => 'pgr', 'PGR042G2003' => 'pgr', 'PGR042G3929' => 'pgr', 'PGR083G1137' => 'pgr', 'PGR083G1364' => 'pgr', 'PGSC0003DMG400003381' => 'stu', 'PGSC0003DMG400003417' => 'stu', 'PGSC0003DMG400008981' => 'stu', 'PGSC0003DMG400012417' => 'stu', 'PGSC0003DMG400012823' => 'stu', 'PGSC0003DMG400016885' => 'stu', 'PGSC0003DMG400022812' => 'stu', 'PGSC0003DMG400029726' => 'stu', 'PGSC0003DMG401009243' => 'stu', 'PGSC0003DMG401031505' => 'stu', 'PGSC0003DMG402031505' => 'stu', 'Phvul.001G017600' => 'pvu', 'Phvul.002G193500' => 'pvu', 'Phvul.002G228900' => 'pvu', 'Phvul.002G236800' => 'pvu', 'Phvul.003G049500' => 'pvu', 'Phvul.005G072000' => 'pvu', 'Phvul.006G164800' => 'pvu', 'Phvul.006G185100' => 'pvu', 'Phvul.007G090000' => 'pvu', 'Potri.001G399800' => 'ptr', 'Potri.002G149900' => 'ptr', 'Potri.004G044100' => 'ptr', 'Potri.004G177600' => 'ptr', 'Potri.009G138000' => 'ptr', 'Potri.010G094000' => 'ptr', 'Potri.011G053000' => 'ptr', 'Potri.011G119300' => 'ptr', 'Potri.013G113700' => 'ptr', 'Potri.018G107800' => 'ptr', 'Potri.019G084100' => 'ptr', 'Pp3c14_23720' => 'ppa', 'Pp3c16_6340' => 'ppa', 'Pp3c23_13420' => 'ppa', 'Pp3c24_2740' => 'ppa', 'Pp3c25_860' => 'ppa', 'Pp3c8_21750' => 'ppa', 'Prupe.1G273000' => 'ppe', 'Prupe.1G273700' => 'ppe', 'Prupe.1G274100' => 'ppe', 'Prupe.2G023300' => 'ppe', 'Prupe.4G048000' => 'ppe', 'Prupe.4G080400' => 'ppe', 'Prupe.4G181200' => 'ppe', 'Prupe.8G056900' => 'ppe', 'Prupe.8G168700' => 'ppe', 'Psat1g189080' => 'psa', 'Psat1g204760' => 'psa', 'Psat4g175560' => 'psa', 'Psat4g177720' => 'psa', 'Psat5g244240' => 'psa', 'Psat6g010720' => 'psa', 'Psat6g187200' => 'psa', 'Psat7g072040' => 'psa', 'PSO017G3501' => 'pso', 'PSO063G2148' => 'pso', 'PSO063G5608' => 'pso', 'PSO210G6392' => 'pso', 'PSO541G2319' => 'pso', 'PSO541G2836' => 'pso', 'PSO541G4012' => 'pso', 'PSO541G6253' => 'pso', 'PSO675G0580' => 'pso', 'PSO675G0856' => 'pso', 'PSO675G5635' => 'pso', 'PSO675G9157' => 'pso', 'PSO832G1660' => 'pso', 'PSO832G1969' => 'pso', 'QL02p007186' => 'qlo', 'QL02p033904' => 'qlo', 'QL03p064391' => 'qlo', 'QL05p040593' => 'qlo', 'QL05p058242' => 'qlo', 'QL08p021825' => 'qlo', 'QL11p004981' => 'qlo', 'RcHm_v2.0_Chr1g0318301' => 'rch', 'RcHm_v2.0_Chr4g0418501' => 'rch', 'RcHm_v2.0_Chr4g0439971' => 'rch', 'RcHm_v2.0_Chr5g0008541' => 'rch', 'RcHm_v2.0_Chr5g0014101' => 'rch', 'RcHm_v2.0_Chr5g0014131' => 'rch', 'RcHm_v2.0_Chr5g0033621' => 'rch', 'RcHm_v2.0_Chr6g0272041' => 'rch', 'RcHm_v2.0_Chr6g0278831' => 'rch', 'Rhsim02G0130400' => 'rsi', 'Rhsim02G0171100' => 'rsi', 'Rhsim05G0053000' => 'rsi', 'Rhsim05G0053100' => 'rsi', 'Rhsim06G0096500' => 'rsi', 'Rhsim06G0096600' => 'rsi', 'Rhsim06G0199100' => 'rsi', 'Rhsim12G0062300' => 'rsi', 'Rhsim12G0062800' => 'rsi', 'Sabra02G0118600' => 'sbr', 'Sabra04G0027300' => 'sbr', 'Sabra04G0119500' => 'sbr', 'Sabra08G0112500' => 'sbr', 'Sabra11G0036800' => 'sbr', 'Sabra11G0103800' => 'sbr', 'Sabra13G0096300' => 'sbr', 'Sabra16G0262300' => 'sbr', 'Sabra18G0091700' => 'sbr', 'Sabra19G0095400' => 'sbr', 'SalBow6G3080' => 'sbo', 'SalBow7G1157' => 'sbo', 'SalBow7G2123' => 'sbo', 'SalBow7G2285' => 'sbo', 'SalBow7G3537' => 'sbo', 'SalBow8G2947' => 'sbo', 'SalBow8G4463' => 'sbo', 'SalBow8G5466' => 'sbo', 'Sc01g0001750' => 'sci', 'Sc02g0006640' => 'sci', 'Sc02g0006670' => 'sci', 'Sc04g0008220' => 'sci', 'Sc05g0006190' => 'sci', 'Sc08g0002760' => 'sci', 'Sc17g0006170' => 'sci', 'Sc22g0002050' => 'sci', 'Sc23g0001190' => 'sci', 'Sc24g0000980' => 'sci', 'Sed0006245' => 'sed', 'Sed0007543' => 'sed', 'Sed0009411' => 'sed', 'Sed0010765' => 'sed', 'Sed0012944' => 'sed', 'Sed0014682' => 'sed', 'Sed0016174' => 'sed', 'Sed0016796' => 'sed', 'Sed0020317' => 'sed', 'Sed0021467' => 'sed', 'SEGI_01316' => 'sgi', 'SEGI_03374' => 'sgi', 'SEGI_16265' => 'sgi', 'SEGI_18569' => 'sgi', 'SEGI_20351' => 'sgi', 'SEGI_26395' => 'sgi', 'SEGI_29469' => 'sgi', 'SEGI_34771' => 'sgi', 'SEGI_36769' => 'sgi', 'SEGI_37139' => 'sgi', 'SGA_v2.0_scaffold100G29687' => 'sas', 'SGA_v2.0_scaffold118G32472' => 'sas', 'SGA_v2.0_scaffold14G07051' => 'sas', 'SGA_v2.0_scaffold183G39845' => 'sas', 'SGA_v2.0_scaffold1G00174' => 'sas', 'SGA_v2.0_scaffold22G09714' => 'sas', 'SGA_v2.0_scaffold333G48992' => 'sas', 'SGA_v2.0_scaffold46G17491' => 'sas', 'SGA_v2.0_scaffold49G18294' => 'sas', 'SGA_v2.0_scaffold63G21658' => 'sas', 'SHI01741' => 'shi', 'SHI05771' => 'shi', 'SHI18077' => 'shi', 'SHI20525' => 'shi', 'SHI20527' => 'shi', 'SHI20528' => 'shi', 'SMO172G0185' => 'smo', 'SMO198G0020' => 'smo', 'SMO351G0006' => 'smo', 'SMO356G0118' => 'smo', 'SMO358G0296' => 'smo', 'SMO367G0079' => 'smo', 'SMO367G1277' => 'smo', 'Solyc01g014220.3' => 'sly', 'Solyc01g111770.2' => 'sly', 'Solyc02g078180.3' => 'sly', 'Solyc03g006430.3' => 'sly', 'Solyc03g006456.1' => 'sly', 'Solyc03g079860.2' => 'sly', 'Solyc04g079770.3' => 'sly', 'Solyc05g007430.4' => 'sly', 'Solyc07g063150.3' => 'sly', 'Solyc08g016620.3' => 'sly', 'Solyc09g057590.3' => 'sly', 'Solyc09g057600.1' => 'sly', 'Solyc10g009050.3' => 'sly', 'Solyc11g017420.2' => 'sly', 'Sopen01g053810' => 'spe', 'Sopen02g023040' => 'spe', 'Sopen03g002440' => 'spe', 'Sopen04g033350' => 'spe', 'Sopen05g003310' => 'spe', 'Sopen07g004050' => 'spe', 'Sopen07g031340' => 'spe', 'Sopen08g006990' => 'spe', 'Sopen10g004830' => 'spe', 'Sopen11g009370' => 'spe', 'Sp1g24450' => 'spa', 'Sp1g29670' => 'spa', 'Sp1g39600' => 'spa', 'Sp2g11080' => 'spa', 'Sp2g13970' => 'spa', 'Sp4g16130' => 'spa', 'Sp6g13080' => 'spa', 'Sp7g37270' => 'spa', 'TAR371G0065' => 'tar', 'TAR376G0340' => 'tar', 'TAR376G0435' => 'tar', 'TAR381G0002' => 'tar', 'TAR381G1236' => 'tar', 'TAR624G0055' => 'tar', 'TAR624G0324' => 'tar', 'TAR624G0696' => 'tar', 'TAR624G0906' => 'tar', 'TAR625G0107' => 'tar', 'TAR626G0015' => 'tar', 'TAR626G1356' => 'tar', 'TAR627G0888' => 'tar', 'TAR628G0399' => 'tar', 'TAR628G1327' => 'tar', 'TAR629G2831' => 'tar', 'TAR629G2874' => 'tar', 'TAR633G1432' => 'tar', 'TAR633G2771' => 'tar', 'THA.LOC104803394' => 'tha', 'THA.LOC104805153' => 'tha', 'THA.LOC104806784' => 'tha', 'THA.LOC104810473' => 'tha', 'THA.LOC104813100' => 'tha', 'THA.LOC104814215' => 'tha', 'THA.LOC104815554' => 'tha', 'THA.LOC104820544' => 'tha', 'THA.LOC104824754' => 'tha', 'THA.LOC104827717' => 'tha', 'Thecc.02G031400' => 'tca', 'Thecc.02G055900' => 'tca', 'Thecc.02G350800' => 'tca', 'Thecc.06G150900' => 'tca', 'Thecc.06G186600' => 'tca', 'Thecc.07G089600' => 'tca', 'Thecc.08G020400' => 'tca', 'Thecc.08G182100' => 'tca', 'Thhalv10000873m.g' => 'esa', 'Thhalv10004185m.g' => 'esa', 'Thhalv10006981m.g' => 'esa', 'Thhalv10007204m.g' => 'esa', 'Thhalv10011374m.g' => 'esa', 'Thhalv10013482m.g' => 'esa', 'Thhalv10017801m.g' => 'esa', 'Thhalv10024983m.g' => 'esa', 'TPR.G12072' => 'tpr', 'TPR.G15769' => 'tpr', 'TPR.G16504' => 'tpr', 'TPR.G16506' => 'tpr', 'TPR.G24345' => 'tpr', 'TPR.G26666' => 'tpr', 'TPR.G27320' => 'tpr', 'TPR.G31819' => 'tpr', 'TPR.G38879' => 'tpr', 'TPR.G39015' => 'tpr', 'TPR.G8819' => 'tpr', 'TWI09G0924' => 'twi', 'TWI12G0811' => 'twi', 'TWI12G1294' => 'twi', 'TWI31G0150' => 'twi', 'TWI36G1262' => 'twi', 'TWI38G1287' => 'twi', 'TWI38G1633' => 'twi', 'TWI38G1982' => 'twi', 'TWI39G0116' => 'twi', 'TWI60G1011' => 'twi', 'TWI63G0171' => 'twi', 'TWI73G0839' => 'twi', 'TWI79G1511' => 'twi', 'unitig_0.g915' => 'ugi', 'unitig_0.g916' => 'ugi', 'unitig_21.g20219' => 'ugi', 'unitig_21.g20416' => 'ugi', 'unitig_578.g16132' => 'ugi', 'unitig_578.g16718' => 'ugi', 'unitig_62.g23481' => 'ugi', 'unitig_744.g24535' => 'ugi', 'unitig_749.g13525' => 'ugi', 'vmacro01248' => 'vma', 'vmacro02290' => 'vma', 'vmacro10946' => 'vma', 'vmacro11865' => 'vma', 'vmacro12493' => 'vma', 'vmacro17322' => 'vma', 'vmacro21599' => 'vma', 'vmacro23041' => 'vma', 'VMungo0251G0004' => 'vmu', 'VMungo0251G2639' => 'vmu', 'VMungo0251G2967' => 'vmu', 'VMungo0540G0864' => 'vmu', 'VMungo0540G1569' => 'vmu', 'VMungo0647G0317' => 'vmu', 'VMungo0720G1373' => 'vmu', 'VMungo0720G1508' => 'vmu', 'VMungo1080G0485' => 'vmu', 'VMungo1215G3177' => 'vmu', 'Zm00001eb112600' => 'zma', 'Zm00001eb120220' => 'zma', 'Zm00001eb153240' => 'zma', 'Zm00001eb168880' => 'zma', 'Zm00001eb213920' => 'zma', 'Zm00001eb228280' => 'zma', 'Zm00001eb254580' => 'zma', 'Zm00001eb272180' => 'zma', 'Zm00001eb293190' => 'zma', 'Zm00001eb322930' => 'zma', 'Zm00001eb353360' => 'zma', 'Zm00001eb353390' => 'zma', 'Zm00001eb353430' => 'zma', 'Zm00001eb353440' => 'zma', 'Zm00001eb353780' => 'zma' ) $gf_id = 'HOM05D000499' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000499' ) $data_identifier = 'HOM05D000499' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 29, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 12, 'amhyb' => (int) 8, 'aly' => (int) 12, 'aox' => (int) 9, 'arhy' => (int) 26, 'ath' => (int) 8, 'atr' => (int) 7, 'acertr' => (int) 10, 'cqu' => (int) 15, 'bca' => (int) 29, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 11, 'cansat' => (int) 8, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 9, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 8, 'cpa' => (int) 10, 'csa' => (int) 7, 'camsi' => (int) 20, 'dca' => (int) 8, 'din' => (int) 12, 'dzi' => (int) 14, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 6, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 38, 'gra' => (int) 16, 'vvi' => (int) 8, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 5, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 11, 'lja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 11, 'mpo' => (int) 3, 'mbi' => (int) 14, 'mdo' => (int) 14, 'mtr' => (int) 8, 'cme' => (int) 9, 'egut' => (int) 9, 'ama' => (int) 11, 'nta' => (int) 17, 'nnu' => (int) 11, 'oeu' => (int) 18, 'osa' => (int) 8, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 6, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 9, 'rsi' => (int) 9, 'sbr' => (int) 10, 'sbo' => (int) 8, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 10, 'sas' => (int) 10, 'shi' => (int) 6, 'smo' => (int) 7, 'sly' => (int) 14, 'spe' => (int) 10, 'spa' => (int) 8, 'tar' => (int) 19, 'tha' => (int) 10, 'tca' => (int) 8, 'esa' => (int) 8, 'tpr' => (int) 11, 'twi' => (int) 13, 'ugi' => (int) 9, 'vma' => (int) 8, 'vmu' => (int) 10, 'zma' => (int) 15 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb353780' $species_info = array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ) $local_species = 'cme' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000499', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1066', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p29780' => 'bna', 'A02p33180' => 'bna', 'A03p16470' => 'bna', 'A03p66010' => 'bna', 'A04p25970' => 'bna', 'A06p01270' => 'bna', 'A06p46080' => 'bna', 'A07p11400' => 'bna', 'A08p01840' => 'bna', 'A08p08230' => 'bna', 'A08p25740' => 'bna', 'A09p32070' => 'bna', 'A09p37830' => 'bna', 'A09p42840' => 'bna', 'A09p42850' => 'bna', 'Aa31LG10G2060' => 'aar', 'Aa31LG2G7410' => 'aar', 'Aa31LG6G10200' => 'aar', 'Aa31LG6G16680' => 'aar', 'Aa31LG6G8470' => 'aar', 'Aa31LG9G12730' => 'aar', 'Aa31LG9G13680' => 'aar', 'Aa31LG9G14920' => 'aar', 'Aa31LG9G6650' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4977' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5467' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3254' => 'aag', 'Actinidia02578' => 'ach', 'Actinidia07693' => 'ach', 'Actinidia08413' => 'ach', 'Actinidia08414' => 'ach', 'Actinidia15289' => 'ach', 'Actinidia19871' => 'ach', 'Actinidia21475' => 'ach', 'Actinidia22576' => 'ach', 'Actinidia28327' => 'ach', 'Actinidia32491' => 'ach', 'Actinidia39463' => 'ach', 'Actinidia39571' => 'ach', 'Ah.01g013750' => 'amhyb', 'Ah.01g023210' => 'amhyb', 'Ah.04g164850' => 'amhyb', 'Ah.05g178060' => 'amhyb', 'Ah.07g204270' => 'amhyb', 'Ah.07g208480' => 'amhyb', 'Ah.09g237410' => 'amhyb', 'Ah.14g089460' => 'amhyb', 'AL1G41790' => 'aly', 'AL1G49050' => 'aly', 'AL1G53810' => 'aly', 'AL1G61400' => 'aly', 'AL4G18580' => 'aly', 'AL5G12510' => 'aly', 'AL5G12540' => 'aly', 'AL6G43230' => 'aly', 'AL7G10370' => 'aly', 'AL7G19250' => 'aly', 'AL8G12240' => 'aly', 'AL8G18540' => 'aly', 'Aqoxy1G02409' => 'aox', 'Aqoxy2G03993' => 'aox', 'Aqoxy3G03357' => 'aox', 'Aqoxy4G00785' => 'aox', 'Aqoxy5G02598' => 'aox', 'Aqoxy6G00132' => 'aox', 'Aqoxy7G01776' => 'aox', 'Aqoxy7G02316' => 'aox', 'Aqoxy7G03973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.12AFKW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B8730' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27IQR1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3F75VG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3RE0GA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41TCQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.527VTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FIR39' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5W8UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DA38EV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ63HS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H1I32C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HC27T5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4M8AP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7N3CZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9UVDZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LS1NQA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT1D4B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SKC4TM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCFV76' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF9Q1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQWD9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1ZM88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WE07RT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YCK7VH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJE6Q6' => 'arhy', 'AT1G28240' => 'ath', 'AT1G34550' => 'ath', 'AT1G53040' => 'ath', 'AT2G02910' => 'ath', 'AT4G09630' => 'ath', 'AT4G38500' => 'ath', 'AT5G42660' => 'ath', 'AT5G46220' => 'ath', 'ATR0152G026' => 'atr', 'ATR0564G343' => 'atr', 'ATR0706G151' => 'atr', 'ATR0733G207' => 'atr', 'ATR0751G234' => 'atr', 'ATR0807G048' => 'atr', 'ATR1091G084' => 'atr', 'Atru.chr10.1229' => 'acertr', 'Atru.chr10.1230' => 'acertr', 'Atru.chr10.1874' => 'acertr', 'Atru.chr11.1808' => 'acertr', 'Atru.chr13.1795' => 'acertr', 'Atru.chr13.570' => 'acertr', 'Atru.chr2.2608' => 'acertr', 'Atru.chr2.2609' => 'acertr', 'Atru.chr5.3428' => 'acertr', 'Atru.chr8.1171' => 'acertr', 'AUR62004651' => 'cqu', 'AUR62008675' => 'cqu', 'AUR62010014' => 'cqu', 'AUR62013004' => 'cqu', 'AUR62014825' => 'cqu', 'AUR62015015' => 'cqu', 'AUR62015151' => 'cqu', 'AUR62017020' => 'cqu', 'AUR62019422' => 'cqu', 'AUR62023570' => 'cqu', 'AUR62025571' => 'cqu', 'AUR62029098' => 'cqu', 'AUR62033863' => 'cqu', 'AUR62034296' => 'cqu', 'AUR62040075' => 'cqu', 'BcaB02g07334' => 'bca', 'BcaB02g10575' => 'bca', 'BcaB03g12119' => 'bca', 'BcaB03g12120' => 'bca', 'BcaB03g13945' => 'bca', 'BcaB04g17123' => 'bca', 'BcaB04g17867' => 'bca', 'BcaB04g19839' => 'bca', 'BcaB07g30317' => 'bca', 'BcaB07g32432' => 'bca', 'BcaB07g33362' => 'bca', 'BcaB08g36611' => 'bca', 'BcaC01g00028' => 'bca', 'BcaC01g01356' => 'bca', 'BcaC01g02034' => 'bca', 'BcaC01g06051' => 'bca', 'BcaC03g16839' => 'bca', 'BcaC03g17176' => 'bca', 'BcaC05g26829' => 'bca', 'BcaC06g31490' => 'bca', 'BcaC06g35344' => 'bca', 'BcaC06g36570' => 'bca', 'BcaC07g37537' => 'bca', 'BcaC08g43491' => 'bca', 'BcaC08g43773' => 'bca', 'BcaNung00234' => 'bca', 'BcaNung01982' => 'bca', 'BcaNung03707' => 'bca', 'BcaNung06454' => 'bca', 'BolC2t10762H' => 'bol', 'BolC2t11191H' => 'bol', 'BolC3t14322H' => 'bol', 'BolC3t19747H' => 'bol', 'BolC3t21425H' => 'bol', 'BolC4t27800H' => 'bol', 'BolC5t31423H' => 'bol', 'BolC6t35951H' => 'bol', 'BolC6t36282H' => 'bol', 'BolC7t40678H' => 'bol', 'BolC7t40679H' => 'bol', 'BolC7t42222H' => 'bol', 'BolC7t43492H' => 'bol', 'BolC7t46785H' => 'bol', 'BolC8t47853H' => 'bol', 'BolC9t56805H' => 'bol', 'BraA02t08000Z' => 'bra', 'BraA02t08341Z' => 'bra', 'BraA03t10936Z' => 'bra', 'BraA03t15657Z' => 'bra', 'BraA04t18100Z' => 'bra', 'BraA05t20523Z' => 'bra', 'BraA06t23353Z' => 'bra', 'BraA06t27473Z' => 'bra', 'BraA06t27769Z' => 'bra', 'BraA07t28928Z' => 'bra', 'BraA08t32236Z' => 'bra', 'BraA08t32841Z' => 'bra', 'BraA08t34524Z' => 'bra', 'BraA09t38742Z' => 'bra', 'BraA09t39295Z' => 'bra', 'C02p47180' => 'bna', 'C02p50990' => 'bna', 'C03p19360' => 'bna', 'C03p74950' => 'bna', 'C03p91000' => 'bna', 'C04p63260' => 'bna', 'C05p27050' => 'bna', 'C06p08750' => 'bna', 'C06p11490' => 'bna', 'C07p02820' => 'bna', 'C07p17180' => 'bna', 'C07p29440' => 'bna', 'C07p63730' => 'bna', 'C09p39260' => 'bna', 'CAN.G1164.34' => 'can', 'CAN.G1164.39' => 'can', 'CAN.G1530.3' => 'can', 'CAN.G162.61' => 'can', 'CAN.G176.6' => 'can', 'CAN.G289.49' => 'can', 'CAN.G370.21' => 'can', 'CAN.G370.22' => 'can', 'CAN.G371.117' => 'can', 'CAN.G58.37' => 'can', 'CAN.G588.98' => 'can', 'CANSAT21G2266' => 'cansat', 'CANSAT25G2799' => 'cansat', 'CANSAT35G0862' => 'cansat', 'CANSAT35G1704' => 'cansat', 'CANSAT35G1760' => 'cansat', 'CANSAT56G3971' => 'cansat', 'CANSAT56G4116' => 'cansat', 'CANSAT80G1259' => 'cansat', 'CARHR027730' => 'chi', 'CARHR033880' => 'chi', 'CARHR043270' => 'chi', 'CARHR145330' => 'chi', 'CARHR145340' => 'chi', 'CARHR175570' => 'chi', 'CARHR181570' => 'chi', 'CARHR258470' => 'chi', 'CARHR260490' => 'chi', 'CARHR294220' => 'chi', 'Carub.0001s2668' => 'cru', 'Carub.0001s3257' => 'cru', 'Carub.0001s4220' => 'cru', 'Carub.0005s0179' => 'cru', 'Carub.0006s2807' => 'cru', 'Carub.0007s0039' => 'cru', 'Carub.0008s0169' => 'cru', 'Carub.0008s0636' => 'cru', 'Ca_00338_v3' => 'car', 'Ca_00542_v3' => 'car', 'Ca_01844_v3' => 'car', 'Ca_10611_v3' => 'car', 'Ca_13326_v3' => 'car', 'Ca_17944_v3' => 'car', 'Ca_18546_v3' => 'car', 'Ca_24219_v3' => 'car', 'Ca_29972_v3' => 'car', 'CBR_g3681' => 'cbr', 'CBR_g40021' => 'cbr', 'Cc01_g08140' => 'ccan', 'Cc02_g13410' => 'ccan', 'Cc02_g37480' => 'ccan', 'Cc05_g12030' => 'ccan', 'Cc09_g03370' => 'ccan', 'Cc09_g10300' => 'ccan', 'Cc10_g03530' => 'ccan', 'Cc10_g11380' => 'ccan', 'CDE01G0176' => 'cde', 'CDE02G0675' => 'cde', 'CDE02G0942' => 'cde', 'CDE02G1153' => 'cde', 'CDE02G4177' => 'cde', 'CDE04G2117' => 'cde', 'CDE04G2736' => 'cde', 'CDE08G1161' => 'cde', 'CDE09G1238' => 'cde', 'Cfa000467' => 'cfa', 'Cfa000947' => 'cfa', 'Cfa004969' => 'cfa', 'Cfa005284' => 'cfa', 'Cfa008993' => 'cfa', 'Cfa018187' => 'cfa', 'Cfa018454' => 'cfa', 'Cfa020585' => 'cfa', 'Ciclev10000424m.g' => 'ccl', 'Ciclev10003605m.g' => 'ccl', 'Ciclev10007828m.g' => 'ccl', 'Ciclev10014620m.g' => 'ccl', 'Ciclev10015169m.g' => 'ccl', 'Ciclev10018291m.g' => 'ccl', 'Ciclev10028256m.g' => 'ccl', 'Ciclev10033822m.g' => 'ccl', 'CiPaw.05G060300' => 'cil', 'CiPaw.05G085000' => 'cil', 'CiPaw.06G083700' => 'cil', 'CiPaw.06G120300' => 'cil', 'CiPaw.09G060500' => 'cil', 'CiPaw.09G123800' => 'cil', 'CiPaw.11G169700' => 'cil', 'CiPaw.12G118300' => 'cil', 'CiPaw.15G071000' => 'cil', 'CiPaw.15G081900' => 'cil', 'ClCG01G024610' => 'cla', 'ClCG03G006070' => 'cla', 'ClCG05G019250' => 'cla', 'ClCG09G009500' => 'cla', 'ClCG11G008200' => 'cla', 'ClCG11G018080' => 'cla', 'COL.COLO4_17373' => 'col', 'COL.COLO4_22994' => 'col', 'COL.COLO4_26389' => 'col', 'COL.COLO4_27170' => 'col', 'COL.COLO4_31074' => 'col', 'COL.COLO4_31465' => 'col', 'COL.COLO4_36438' => 'col', 'COL.COLO4_36439' => 'col', 'Cpa.g.c38781' => 'cpa', 'Cpa.g.sc128.12' => 'cpa', 'Cpa.g.sc166.7' => 'cpa', 'Cpa.g.sc166.8' => 'cpa', 'Cpa.g.sc20.111' => 'cpa', 'Cpa.g.sc27.31' => 'cpa', 'Cpa.g.sc64.36' => 'cpa', 'Cpa.g.sc64.37' => 'cpa', 'Cpa.g.sc66.49' => 'cpa', 'Cpa.g.sc80.64' => 'cpa', 'CsaV3_1G012320' => 'csa', 'CsaV3_2G008480' => 'csa', 'CsaV3_2G033450' => 'csa', 'CsaV3_3G044830' => 'csa', 'CsaV3_4G033710' => 'csa', 'CsaV3_6G051730' => 'csa', 'CsaV3_7G025350' => 'csa', 'CSS0001067' => 'camsi', 'CSS0005996' => 'camsi', 'CSS0006590' => 'camsi', 'CSS0009673' => 'camsi', 'CSS0010201' => 'camsi', 'CSS0010549' => 'camsi', 'CSS0011364' => 'camsi', 'CSS0014473' => 'camsi', 'CSS0014961' => 'camsi', 'CSS0020191' => 'camsi', 'CSS0021165' => 'camsi', 'CSS0022306' => 'camsi', 'CSS0030591' => 'camsi', 'CSS0030696' => 'camsi', 'CSS0032653' => 'camsi', 'CSS0037487' => 'camsi', 'CSS0041102' => 'camsi', 'CSS0041261' => 'camsi', 'CSS0046246' => 'camsi', 'CSS0049256' => 'camsi', 'DCAR_004075' => 'dca', 'DCAR_011538' => 'dca', 'DCAR_019553' => 'dca', 'DCAR_020952' => 'dca', 'DCAR_021739' => 'dca', 'DCAR_027407' => 'dca', 'DCAR_027913' => 'dca', 'DCAR_028066' => 'dca', 'Dinv05899' => 'din', 'Dinv07563' => 'din', 'Dinv08010' => 'din', 'Dinv14125' => 'din', 'Dinv20172' => 'din', 'Dinv30743' => 'din', 'Dinv31229' => 'din', 'Dinv34162' => 'din', 'Dinv36028' => 'din', 'Dinv39368' => 'din', 'Dinv40565' => 'din', 'Dinv41706' => 'din', 'Duzib052G0089' => 'dzi', 'Duzib116G0641' => 'dzi', 'Duzib132G0069' => 'dzi', 'Duzib132G1219' => 'dzi', 'Duzib147G0278' => 'dzi', 'Duzib160G0480' => 'dzi', 'Duzib170G0661' => 'dzi', 'Duzib177G0591' => 'dzi', 'Duzib187G1353' => 'dzi', 'Duzib192G0858' => 'dzi', 'Duzib192G0883' => 'dzi', 'Duzib213G0506' => 'dzi', 'Duzib235G0289' => 'dzi', 'Duzib251G0422' => 'dzi', 'ECA232G3898' => 'eca', 'ECA233G5950' => 'eca', 'ECA234G1699' => 'eca', 'ECA234G2421' => 'eca', 'ECA236G0426' => 'eca', 'ECA236G4331' => 'eca', 'ECA248G2573' => 'eca', 'EL10Ac1g00077' => 'bvu', 'EL10Ac1g01746' => 'bvu', 'EL10Ac2g03464' => 'bvu', 'EL10Ac4g08176' => 'bvu', 'EL10Ac7g17521' => 'bvu', 'EL10Ac8g20386' => 'bvu', 'EL10Ac9g21343' => 'bvu', 'EL10Ac9g22688' => 'bvu', 'Eucgr.B03434' => 'egr', 'Eucgr.D00618' => 'egr', 'Eucgr.E02395' => 'egr', 'Eucgr.F01129' => 'egr', 'Eucgr.F02622' => 'egr', 'Eucgr.F04207' => 'egr', 'FAN01G0570' => 'fan', 'FAN03G3351' => 'fan', 'FAN06G3702' => 'fan', 'FAN07G2149' => 'fan', 'FAN10G3758' => 'fan', 'FAN11G1170' => 'fan', 'FAN11G2050' => 'fan', 'FAN11G2724' => 'fan', 'FAN12G1700' => 'fan', 'FAN12G2028' => 'fan', 'FAN15G1160' => 'fan', 'FAN15G3063' => 'fan', 'FAN16G2540' => 'fan', 'FAN16G3077' => 'fan', 'FAN16G3624' => 'fan', 'FAN17G0221' => 'fan', 'FAN20G2492' => 'fan', 'FAN20G2905' => 'fan', 'FAN21G0548' => 'fan', 'FAN21G1300' => 'fan', 'FAN22G0077' => 'fan', 'FAN22G1315' => 'fan', 'FAN24G1280' => 'fan', 'FAN24G1445' => 'fan', 'FAN24G3527' => 'fan', 'FAN25G0464' => 'fan', 'FAN25G2885' => 'fan', 'FAN25G3270' => 'fan', 'FAN27G1101' => 'fan', 'FAN27G2846' => 'fan', 'FAN27G3524' => 'fan', 'FvH4_2g11770' => 'fve', 'FvH4_2g15630' => 'fve', 'FvH4_3g05570' => 'fve', 'FvH4_3g09110' => 'fve', 'FvH4_3g19940' => 'fve', 'FvH4_4g04821' => 'fve', 'FvH4_4g31480' => 'fve', 'FvH4_7g01740' => 'fve', 'Glyma.05G130400' => 'gma', 'Glyma.05G156400' => 'gma', 'Glyma.07G197000' => 'gma', 'Glyma.08G085151' => 'gma', 'Glyma.08G114500' => 'gma', 'Glyma.08G300400' => 'gma', 'Glyma.10G215800' => 'gma', 'Glyma.12G224400' => 'gma', 'Glyma.13G179300' => 'gma', 'Glyma.13G218151' => 'gma', 'Glyma.13G238800' => 'gma', 'Glyma.13G276900' => 'gma', 'Glyma.14G078200' => 'gma', 'Glyma.15G074500' => 'gma', 'Glyma.15G094100' => 'gma', 'Glyma.17G247200' => 'gma', 'Glyma.18G120100' => 'gma', 'Glyma.20G176000' => 'gma', 'Gohir.A01G063600' => 'ghi', 'Gohir.A01G170301' => 'ghi', 'Gohir.A02G060500' => 'ghi', 'Gohir.A05G133850' => 'ghi', 'Gohir.A05G161400' => 'ghi', 'Gohir.A06G012900' => 'ghi', 'Gohir.A06G035901' => 'ghi', 'Gohir.A06G127100' => 'ghi', 'Gohir.A06G210500' => 'ghi', 'Gohir.A08G008650' => 'ghi', 'Gohir.A09G072700' => 'ghi', 'Gohir.A09G088301' => 'ghi', 'Gohir.A10G040600' => 'ghi', 'Gohir.A12G036300' => 'ghi', 'Gohir.A12G143350' => 'ghi', 'Gohir.A12G165500' => 'ghi', 'Gohir.A13G145700' => 'ghi', 'Gohir.D01G050000' => 'ghi', 'Gohir.D01G051366' => 'ghi', 'Gohir.D01G161350' => 'ghi', 'Gohir.D02G065900' => 'ghi', 'Gohir.D05G164200' => 'ghi', 'Gohir.D05G355500' => 'ghi', 'Gohir.D06G010400' => 'ghi', 'Gohir.D06G111250' => 'ghi', 'Gohir.D06G132000' => 'ghi', 'Gohir.D06G210500' => 'ghi', 'Gohir.D07G165675' => 'ghi', 'Gohir.D08G062240' => 'ghi', 'Gohir.D08G086101' => 'ghi', 'Gohir.D08G138060' => 'ghi', 'Gohir.D09G072300' => 'ghi', 'Gohir.D10G041400' => 'ghi', 'Gohir.D11G191020' => 'ghi', 'Gohir.D11G212066' => 'ghi', 'Gohir.D12G036300' => 'ghi', 'Gohir.D12G168600' => 'ghi', 'Gohir.D13G150600' => 'ghi', 'Gorai.001G057300' => 'gra', 'Gorai.002G069900' => 'gra', 'Gorai.002G200000' => 'gra', 'Gorai.003G067600' => 'gra', 'Gorai.005G074800' => 'gra', 'Gorai.006G087300' => 'gra', 'Gorai.008G037500' => 'gra', 'Gorai.008G181400' => 'gra', 'Gorai.009G169400' => 'gra', 'Gorai.009G387900' => 'gra', 'Gorai.010G013300' => 'gra', 'Gorai.010G153800' => 'gra', 'Gorai.010G255800' => 'gra', 'Gorai.011G043700' => 'gra', 'Gorai.011G198900' => 'gra', 'Gorai.013G168400' => 'gra', 'GSVIVG01005212001' => 'vvi', 'GSVIVG01006163001' => 'vvi', 'GSVIVG01009625001' => 'vvi', 'GSVIVG01014338001' => 'vvi', 'GSVIVG01020005001' => 'vvi', 'GSVIVG01021450001' => 'vvi', 'GSVIVG01023975001' => 'vvi', 'GSVIVG01034490001' => 'vvi', 'HanXRQChr04g0112071' => 'han', 'HanXRQChr05g0131151' => 'han', 'HanXRQChr09g0262371' => 'han', 'HanXRQChr09g0268401' => 'han', 'HanXRQChr10g0279241' => 'han', 'HanXRQChr10g0297961' => 'han', 'HanXRQChr11g0326231' => 'han', 'HanXRQChr11g0328471' => 'han', 'HanXRQChr16g0507941' => 'han', 'HanXRQChr17g0560211' => 'han', 'Haze_02108' => 'cav', 'Haze_02428' => 'cav', 'Haze_05593' => 'cav', 'Haze_06448' => 'cav', 'Haze_09427' => 'cav', 'Haze_12022' => 'cav', 'Haze_17612' => 'cav', 'Haze_17928' => 'cav', 'Hma1.2p1_0032F.1_g019250' => 'hma', 'Hma1.2p1_0163F.1_g072690' => 'hma', 'Hma1.2p1_0265F.1_g106710' => 'hma', 'Hma1.2p1_0286F.1_g113970' => 'hma', 'Hma1.2p1_0363F.1_g136640' => 'hma', 'Hma1.2p1_0584F.1_g183470' => 'hma', 'Hma1.2p1_0885F.1_g232570' => 'hma', 'HPP92_006022' => 'vpl', 'HPP92_007320' => 'vpl', 'HPP92_011521' => 'vpl', 'HPP92_019387' => 'vpl', 'HPP92_024038' => 'vpl', 'Hund05891' => 'sun', 'Hund06450' => 'sun', 'Hund12053' => 'sun', 'Hund16800' => 'sun', 'Hund21222' => 'sun', 'Hund22896' => 'sun', 'Hund23746' => 'sun', 'Hund27083' => 'sun', 'Lalb_Chr02g0141831' => 'lal', 'Lalb_Chr02g0141841' => 'lal', 'Lalb_Chr05g0220411' => 'lal', 'Lalb_Chr06g0162081' => 'lal', 'Lalb_Chr09g0327651' => 'lal', 'Lalb_Chr13g0295051' => 'lal', 'Lalb_Chr15g0086801' => 'lal', 'Lalb_Chr16g0383781' => 'lal', 'Lalb_Chr16g0383791' => 'lal', 'Lalb_Chr18g0055441' => 'lal', 'Lalb_Chr18g0059611' => 'lal', 'Lalb_Chr20g0109661' => 'lal', 'Lalb_Chr20g0109831' => 'lal', 'Lalb_Chr20g0121871' => 'lal', 'Lalb_Chr22g0355361' => 'lal', 'Lalb_Chr25g0286371' => 'lal', 'Lj1A1187G43' => 'lonja', 'Lj1A1205T50' => 'lonja', 'Lj1A800G33' => 'lonja', 'Lj1C1187T7' => 'lonja', 'Lj1C843T11' => 'lonja', 'Lj1g0010940' => 'lja', 'Lj2A288T69' => 'lonja', 'Lj3g0024276' => 'lja', 'Lj4A47T76' => 'lonja', 'Lj4g0005805' => 'lja', 'Lj4g0006097' => 'lja', 'Lj4g0008528' => 'lja', 'Lj4g0024907' => 'lja', 'Lj5g0012472' => 'lja', 'Lj5g0018648' => 'lja', 'Lj6C789G1' => 'lonja', 'Lj6g0004000' => 'lja', 'Lj7A292G67' => 'lonja', 'Lj7A292T64' => 'lonja', 'Lj9A400T58' => 'lonja', 'Lsat_1_v5_gn_1_126181' => 'lsa', 'Lsat_1_v5_gn_4_123041' => 'lsa', 'Lsat_1_v5_gn_4_133620' => 'lsa', 'Lsat_1_v5_gn_4_53221' => 'lsa', 'Lsat_1_v5_gn_4_71961' => 'lsa', 'Lsat_1_v5_gn_7_105241' => 'lsa', 'Lsat_1_v5_gn_7_21361' => 'lsa', 'Lsat_1_v5_gn_7_28860' => 'lsa', 'Lsat_1_v5_gn_7_31260' => 'lsa', 'Lsat_1_v5_gn_8_52801' => 'lsa', 'Manes.02G191400' => 'mes', 'Manes.03G110100' => 'mes', 'Manes.04G071100' => 'mes', 'Manes.05G100500' => 'mes', 'Manes.05G164700' => 'mes', 'Manes.15G087000' => 'mes', 'Manes.15G121500' => 'mes', 'Manes.16G028300' => 'mes', 'Manes.17G046100' => 'mes', 'Manes.17G069800' => 'mes', 'Manes.18G100500' => 'mes', 'Mapoly0002s0109' => 'mpo', 'Mapoly0024s0007' => 'mpo', 'Mapoly0089s0032' => 'mpo', 'MBI04_g42241_MAGBIO' => 'mbi', 'MBI05_g11988_MAGBIO' => 'mbi', 'MBI05_g35452_MAGBIO' => 'mbi', 'MBI07_g30179_MAGBIO' => 'mbi', 'MBI07_g35859_MAGBIO' => 'mbi', 'MBI07_g35860_MAGBIO' => 'mbi', 'MBI07_g37166_MAGBIO' => 'mbi', 'MBI08_g18172_MAGBIO' => 'mbi', 'MBI09_g08441_MAGBIO' => 'mbi', 'MBI13_g01676_MAGBIO' => 'mbi', 'MBI14_g42955_MAGBIO' => 'mbi', 'MBI16_g13161_MAGBIO' => 'mbi', 'MBI17_g27204_MAGBIO' => 'mbi', 'MBI19_g21595_MAGBIO' => 'mbi', 'MD00G1148400' => 'mdo', 'MD02G1301200' => 'mdo', 'MD03G1227800' => 'mdo', 'MD05G1041100' => 'mdo', 'MD05G1124800' => 'mdo', 'MD05G1284000' => 'mdo', 'MD05G1338800' => 'mdo', 'MD05G1338900' => 'mdo', 'MD07G1022800' => 'mdo', 'MD10G1047500' => 'mdo', 'MD10G1127500' => 'mdo', 'MD10G1262300' => 'mdo', 'MD10G1293800' => 'mdo', 'MD16G1074300' => 'mdo', 'Medtr1g021670' => 'mtr', 'Medtr1g096320' => 'mtr', 'Medtr2g013690' => 'mtr', 'Medtr2g019450' => 'mtr', 'Medtr2g085170' => 'mtr', 'Medtr4g088785' => 'mtr', 'Medtr8g055930' => 'mtr', 'Medtr8g085850' => 'mtr', 'MELO3C002605.2' => 'cme', 'MELO3C003891.2' => 'cme', 'MELO3C004012.2' => 'cme', 'MELO3C007134.2' => 'cme', 'MELO3C008118.2' => 'cme', 'MELO3C016700.2' => 'cme', 'MELO3C024127.2' => 'cme', 'MELO3C033361.2' => 'cme', 'MELO3C033362.2' => 'cme', 'Migut.C00430' => 'egut', 'Migut.C01246' => 'egut', 'Migut.E00101' => 'egut', 'Migut.H01486' => 'egut', 'Migut.H01939' => 'egut', 'Migut.K00360' => 'egut', 'Migut.M00910' => 'egut', 'Migut.M01139' => 'egut', 'Migut.N02677' => 'egut', 'MSTRG.13252' => 'ama', 'MSTRG.14701' => 'ama', 'MSTRG.1521' => 'ama', 'MSTRG.15884' => 'ama', 'MSTRG.16242' => 'ama', 'MSTRG.22285' => 'ama', 'MSTRG.22444' => 'ama', 'MSTRG.2349' => 'ama', 'MSTRG.26308' => 'ama', 'MSTRG.28296' => 'ama', 'MSTRG.9895' => 'ama', 'Nitab4.5_0000110g0060' => 'nta', 'Nitab4.5_0000420g0130' => 'nta', 'Nitab4.5_0000422g0030' => 'nta', 'Nitab4.5_0000560g0180' => 'nta', 'Nitab4.5_0000703g0100' => 'nta', 'Nitab4.5_0000786g0200' => 'nta', 'Nitab4.5_0001336g0020' => 'nta', 'Nitab4.5_0001796g0030' => 'nta', 'Nitab4.5_0003348g0060' => 'nta', 'Nitab4.5_0003698g0040' => 'nta', 'Nitab4.5_0003942g0090' => 'nta', 'Nitab4.5_0004775g0070' => 'nta', 'Nitab4.5_0004864g0030' => 'nta', 'Nitab4.5_0005615g0020' => 'nta', 'Nitab4.5_0009288g0030' => 'nta', 'Nitab4.5_0009341g0010' => 'nta', 'Nitab4.5_0009535g0010' => 'nta', 'Nn1g03995' => 'nnu', 'Nn1g04100' => 'nnu', 'Nn1g06530' => 'nnu', 'Nn3g16404' => 'nnu', 'Nn3g17212' => 'nnu', 'Nn3g20776' => 'nnu', 'Nn3g21923' => 'nnu', 'Nn5g27737' => 'nnu', 'Nn5g29461' => 'nnu', 'Nn7g38355' => 'nnu', 'Nn8g39873' => 'nnu', 'Oeu000548.2' => 'oeu', 'Oeu004672.1' => 'oeu', 'Oeu015605.2' => 'oeu', 'Oeu016092.1' => 'oeu', 'Oeu017879.3' => 'oeu', 'Oeu024910.1' => 'oeu', 'Oeu028965.1' => 'oeu', 'Oeu031269.1' => 'oeu', 'Oeu031270.1' => 'oeu', 'Oeu032535.1' => 'oeu', 'Oeu034151.1' => 'oeu', 'Oeu034152.1' => 'oeu', 'Oeu034588.2' => 'oeu', 'Oeu050846.1' => 'oeu', 'Oeu050849.2' => 'oeu', 'Oeu051063.2' => 'oeu', 'Oeu052368.1' => 'oeu', 'Oeu052370.1' => 'oeu', 'Os01g0210400' => 'osa', 'Os01g0304300' => 'osa', 'Os01g0749100' => 'osa', 'Os02g0745800' => 'osa', 'Os03g0769050' => 'osa', 'Os05g0531500' => 'osa', 'Os06g0724300' => 'osa', 'Os11g0198100' => 'osa', 'Peaxi162Scf00069g01425' => 'pax', 'Peaxi162Scf00280g00811' => 'pax', 'Peaxi162Scf00310g00615' => 'pax', 'Peaxi162Scf00362g00542' => 'pax', 'Peaxi162Scf00461g00310' => 'pax', 'Peaxi162Scf00530g00118' => 'pax', 'Peaxi162Scf00541g00057' => 'pax', 'Peaxi162Scf00661g00017' => 'pax', 'Peaxi162Scf00926g00027' => 'pax', 'Peaxi162Scf01064g00263' => 'pax', 'Peaxi162Scf01211g00135' => 'pax', 'PGR004G2336' => 'pgr', 'PGR042G0327' => 'pgr', 'PGR042G1957' => 'pgr', 'PGR042G2003' => 'pgr', 'PGR042G3929' => 'pgr', 'PGR083G1137' => 'pgr', 'PGR083G1364' => 'pgr', 'PGSC0003DMG400003381' => 'stu', 'PGSC0003DMG400003417' => 'stu', 'PGSC0003DMG400008981' => 'stu', 'PGSC0003DMG400012417' => 'stu', 'PGSC0003DMG400012823' => 'stu', 'PGSC0003DMG400016885' => 'stu', 'PGSC0003DMG400022812' => 'stu', 'PGSC0003DMG400029726' => 'stu', 'PGSC0003DMG401009243' => 'stu', 'PGSC0003DMG401031505' => 'stu', 'PGSC0003DMG402031505' => 'stu', 'Phvul.001G017600' => 'pvu', 'Phvul.002G193500' => 'pvu', 'Phvul.002G228900' => 'pvu', 'Phvul.002G236800' => 'pvu', 'Phvul.003G049500' => 'pvu', 'Phvul.005G072000' => 'pvu', 'Phvul.006G164800' => 'pvu', 'Phvul.006G185100' => 'pvu', 'Phvul.007G090000' => 'pvu', 'Potri.001G399800' => 'ptr', 'Potri.002G149900' => 'ptr', 'Potri.004G044100' => 'ptr', 'Potri.004G177600' => 'ptr', 'Potri.009G138000' => 'ptr', 'Potri.010G094000' => 'ptr', 'Potri.011G053000' => 'ptr', 'Potri.011G119300' => 'ptr', 'Potri.013G113700' => 'ptr', 'Potri.018G107800' => 'ptr', 'Potri.019G084100' => 'ptr', 'Pp3c14_23720' => 'ppa', 'Pp3c16_6340' => 'ppa', 'Pp3c23_13420' => 'ppa', 'Pp3c24_2740' => 'ppa', 'Pp3c25_860' => 'ppa', 'Pp3c8_21750' => 'ppa', 'Prupe.1G273000' => 'ppe', 'Prupe.1G273700' => 'ppe', 'Prupe.1G274100' => 'ppe', 'Prupe.2G023300' => 'ppe', 'Prupe.4G048000' => 'ppe', 'Prupe.4G080400' => 'ppe', 'Prupe.4G181200' => 'ppe', 'Prupe.8G056900' => 'ppe', 'Prupe.8G168700' => 'ppe', 'Psat1g189080' => 'psa', 'Psat1g204760' => 'psa', 'Psat4g175560' => 'psa', 'Psat4g177720' => 'psa', 'Psat5g244240' => 'psa', 'Psat6g010720' => 'psa', 'Psat6g187200' => 'psa', 'Psat7g072040' => 'psa', 'PSO017G3501' => 'pso', 'PSO063G2148' => 'pso', 'PSO063G5608' => 'pso', 'PSO210G6392' => 'pso', 'PSO541G2319' => 'pso', 'PSO541G2836' => 'pso', 'PSO541G4012' => 'pso', 'PSO541G6253' => 'pso', 'PSO675G0580' => 'pso', 'PSO675G0856' => 'pso', 'PSO675G5635' => 'pso', 'PSO675G9157' => 'pso', 'PSO832G1660' => 'pso', 'PSO832G1969' => 'pso', 'QL02p007186' => 'qlo', 'QL02p033904' => 'qlo', 'QL03p064391' => 'qlo', 'QL05p040593' => 'qlo', 'QL05p058242' => 'qlo', 'QL08p021825' => 'qlo', 'QL11p004981' => 'qlo', 'RcHm_v2.0_Chr1g0318301' => 'rch', 'RcHm_v2.0_Chr4g0418501' => 'rch', 'RcHm_v2.0_Chr4g0439971' => 'rch', 'RcHm_v2.0_Chr5g0008541' => 'rch', 'RcHm_v2.0_Chr5g0014101' => 'rch', 'RcHm_v2.0_Chr5g0014131' => 'rch', 'RcHm_v2.0_Chr5g0033621' => 'rch', 'RcHm_v2.0_Chr6g0272041' => 'rch', 'RcHm_v2.0_Chr6g0278831' => 'rch', 'Rhsim02G0130400' => 'rsi', 'Rhsim02G0171100' => 'rsi', 'Rhsim05G0053000' => 'rsi', 'Rhsim05G0053100' => 'rsi', 'Rhsim06G0096500' => 'rsi', 'Rhsim06G0096600' => 'rsi', 'Rhsim06G0199100' => 'rsi', 'Rhsim12G0062300' => 'rsi', 'Rhsim12G0062800' => 'rsi', 'Sabra02G0118600' => 'sbr', 'Sabra04G0027300' => 'sbr', 'Sabra04G0119500' => 'sbr', 'Sabra08G0112500' => 'sbr', 'Sabra11G0036800' => 'sbr', 'Sabra11G0103800' => 'sbr', 'Sabra13G0096300' => 'sbr', 'Sabra16G0262300' => 'sbr', 'Sabra18G0091700' => 'sbr', 'Sabra19G0095400' => 'sbr', 'SalBow6G3080' => 'sbo', 'SalBow7G1157' => 'sbo', 'SalBow7G2123' => 'sbo', 'SalBow7G2285' => 'sbo', 'SalBow7G3537' => 'sbo', 'SalBow8G2947' => 'sbo', 'SalBow8G4463' => 'sbo', 'SalBow8G5466' => 'sbo', 'Sc01g0001750' => 'sci', 'Sc02g0006640' => 'sci', 'Sc02g0006670' => 'sci', 'Sc04g0008220' => 'sci', 'Sc05g0006190' => 'sci', 'Sc08g0002760' => 'sci', 'Sc17g0006170' => 'sci', 'Sc22g0002050' => 'sci', 'Sc23g0001190' => 'sci', 'Sc24g0000980' => 'sci', 'Sed0006245' => 'sed', 'Sed0007543' => 'sed', 'Sed0009411' => 'sed', 'Sed0010765' => 'sed', 'Sed0012944' => 'sed', 'Sed0014682' => 'sed', 'Sed0016174' => 'sed', 'Sed0016796' => 'sed', 'Sed0020317' => 'sed', 'Sed0021467' => 'sed', 'SEGI_01316' => 'sgi', 'SEGI_03374' => 'sgi', 'SEGI_16265' => 'sgi', 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'Solyc03g079860.2' => 'sly', 'Solyc04g079770.3' => 'sly', 'Solyc05g007430.4' => 'sly', 'Solyc07g063150.3' => 'sly', 'Solyc08g016620.3' => 'sly', 'Solyc09g057590.3' => 'sly', 'Solyc09g057600.1' => 'sly', 'Solyc10g009050.3' => 'sly', 'Solyc11g017420.2' => 'sly', 'Sopen01g053810' => 'spe', 'Sopen02g023040' => 'spe', 'Sopen03g002440' => 'spe', 'Sopen04g033350' => 'spe', 'Sopen05g003310' => 'spe', 'Sopen07g004050' => 'spe', 'Sopen07g031340' => 'spe', 'Sopen08g006990' => 'spe', 'Sopen10g004830' => 'spe', 'Sopen11g009370' => 'spe', 'Sp1g24450' => 'spa', 'Sp1g29670' => 'spa', 'Sp1g39600' => 'spa', 'Sp2g11080' => 'spa', 'Sp2g13970' => 'spa', 'Sp4g16130' => 'spa', 'Sp6g13080' => 'spa', 'Sp7g37270' => 'spa', 'TAR371G0065' => 'tar', 'TAR376G0340' => 'tar', 'TAR376G0435' => 'tar', 'TAR381G0002' => 'tar', 'TAR381G1236' => 'tar', 'TAR624G0055' => 'tar', 'TAR624G0324' => 'tar', 'TAR624G0696' => 'tar', 'TAR624G0906' => 'tar', 'TAR625G0107' => 'tar', 'TAR626G0015' => 'tar', 'TAR626G1356' => 'tar', 'TAR627G0888' => 'tar', 'TAR628G0399' => 'tar', 'TAR628G1327' => 'tar', 'TAR629G2831' => 'tar', 'TAR629G2874' => 'tar', 'TAR633G1432' => 'tar', 'TAR633G2771' => 'tar', 'THA.LOC104803394' => 'tha', 'THA.LOC104805153' => 'tha', 'THA.LOC104806784' => 'tha', 'THA.LOC104810473' => 'tha', 'THA.LOC104813100' => 'tha', 'THA.LOC104814215' => 'tha', 'THA.LOC104815554' => 'tha', 'THA.LOC104820544' => 'tha', 'THA.LOC104824754' => 'tha', 'THA.LOC104827717' => 'tha', 'Thecc.02G031400' => 'tca', 'Thecc.02G055900' => 'tca', 'Thecc.02G350800' => 'tca', 'Thecc.06G150900' => 'tca', 'Thecc.06G186600' => 'tca', 'Thecc.07G089600' => 'tca', 'Thecc.08G020400' => 'tca', 'Thecc.08G182100' => 'tca', 'Thhalv10000873m.g' => 'esa', 'Thhalv10004185m.g' => 'esa', 'Thhalv10006981m.g' => 'esa', 'Thhalv10007204m.g' => 'esa', 'Thhalv10011374m.g' => 'esa', 'Thhalv10013482m.g' => 'esa', 'Thhalv10017801m.g' => 'esa', 'Thhalv10024983m.g' => 'esa', 'TPR.G12072' => 'tpr', 'TPR.G15769' => 'tpr', 'TPR.G16504' => 'tpr', 'TPR.G16506' => 'tpr', 'TPR.G24345' => 'tpr', 'TPR.G26666' => 'tpr', 'TPR.G27320' => 'tpr', 'TPR.G31819' => 'tpr', 'TPR.G38879' => 'tpr', 'TPR.G39015' => 'tpr', 'TPR.G8819' => 'tpr', 'TWI09G0924' => 'twi', 'TWI12G0811' => 'twi', 'TWI12G1294' => 'twi', 'TWI31G0150' => 'twi', 'TWI36G1262' => 'twi', 'TWI38G1287' => 'twi', 'TWI38G1633' => 'twi', 'TWI38G1982' => 'twi', 'TWI39G0116' => 'twi', 'TWI60G1011' => 'twi', 'TWI63G0171' => 'twi', 'TWI73G0839' => 'twi', 'TWI79G1511' => 'twi', 'unitig_0.g915' => 'ugi', 'unitig_0.g916' => 'ugi', 'unitig_21.g20219' => 'ugi', 'unitig_21.g20416' => 'ugi', 'unitig_578.g16132' => 'ugi', 'unitig_578.g16718' => 'ugi', 'unitig_62.g23481' => 'ugi', 'unitig_744.g24535' => 'ugi', 'unitig_749.g13525' => 'ugi', 'vmacro01248' => 'vma', 'vmacro02290' => 'vma', 'vmacro10946' => 'vma', 'vmacro11865' => 'vma', 'vmacro12493' => 'vma', 'vmacro17322' => 'vma', 'vmacro21599' => 'vma', 'vmacro23041' => 'vma', 'VMungo0251G0004' => 'vmu', 'VMungo0251G2639' => 'vmu', 'VMungo0251G2967' => 'vmu', 'VMungo0540G0864' => 'vmu', 'VMungo0540G1569' => 'vmu', 'VMungo0647G0317' => 'vmu', 'VMungo0720G1373' => 'vmu', 'VMungo0720G1508' => 'vmu', 'VMungo1080G0485' => 'vmu', 'VMungo1215G3177' => 'vmu', 'Zm00001eb112600' => 'zma', 'Zm00001eb120220' => 'zma', 'Zm00001eb153240' => 'zma', 'Zm00001eb168880' => 'zma', 'Zm00001eb213920' => 'zma', 'Zm00001eb228280' => 'zma', 'Zm00001eb254580' => 'zma', 'Zm00001eb272180' => 'zma', 'Zm00001eb293190' => 'zma', 'Zm00001eb322930' => 'zma', 'Zm00001eb353360' => 'zma', 'Zm00001eb353390' => 'zma', 'Zm00001eb353430' => 'zma', 'Zm00001eb353440' => 'zma', 'Zm00001eb353780' => 'zma' ), 'gf_id' => 'HOM05D000499', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000499' ), 'data_identifier' => 'HOM05D000499', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000499', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1066', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p29780' => 'bna', 'A02p33180' => 'bna', 'A03p16470' => 'bna', 'A03p66010' => 'bna', 'A04p25970' => 'bna', 'A06p01270' => 'bna', 'A06p46080' => 'bna', 'A07p11400' => 'bna', 'A08p01840' => 'bna', 'A08p08230' => 'bna', 'A08p25740' => 'bna', 'A09p32070' => 'bna', 'A09p37830' => 'bna', 'A09p42840' => 'bna', 'A09p42850' => 'bna', 'Aa31LG10G2060' => 'aar', 'Aa31LG2G7410' => 'aar', 'Aa31LG6G10200' => 'aar', 'Aa31LG6G16680' => 'aar', 'Aa31LG6G8470' => 'aar', 'Aa31LG9G12730' => 'aar', 'Aa31LG9G13680' => 'aar', 'Aa31LG9G14920' => 'aar', 'Aa31LG9G6650' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4977' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5467' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3254' => 'aag', 'Actinidia02578' => 'ach', 'Actinidia07693' => 'ach', 'Actinidia08413' => 'ach', 'Actinidia08414' => 'ach', 'Actinidia15289' => 'ach', 'Actinidia19871' => 'ach', 'Actinidia21475' => 'ach', 'Actinidia22576' => 'ach', 'Actinidia28327' => 'ach', 'Actinidia32491' => 'ach', 'Actinidia39463' => 'ach', 'Actinidia39571' => 'ach', 'Ah.01g013750' => 'amhyb', 'Ah.01g023210' => 'amhyb', 'Ah.04g164850' => 'amhyb', 'Ah.05g178060' => 'amhyb', 'Ah.07g204270' => 'amhyb', 'Ah.07g208480' => 'amhyb', 'Ah.09g237410' => 'amhyb', 'Ah.14g089460' => 'amhyb', 'AL1G41790' => 'aly', 'AL1G49050' => 'aly', 'AL1G53810' => 'aly', 'AL1G61400' => 'aly', 'AL4G18580' => 'aly', 'AL5G12510' => 'aly', 'AL5G12540' => 'aly', 'AL6G43230' => 'aly', 'AL7G10370' => 'aly', 'AL7G19250' => 'aly', 'AL8G12240' => 'aly', 'AL8G18540' => 'aly', 'Aqoxy1G02409' => 'aox', 'Aqoxy2G03993' => 'aox', 'Aqoxy3G03357' => 'aox', 'Aqoxy4G00785' => 'aox', 'Aqoxy5G02598' => 'aox', 'Aqoxy6G00132' => 'aox', 'Aqoxy7G01776' => 'aox', 'Aqoxy7G02316' => 'aox', 'Aqoxy7G03973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.12AFKW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B8730' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27IQR1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3F75VG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3RE0GA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41TCQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.527VTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FIR39' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5W8UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DA38EV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ63HS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H1I32C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HC27T5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4M8AP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7N3CZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9UVDZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LS1NQA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT1D4B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SKC4TM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCFV76' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF9Q1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQWD9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1ZM88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WE07RT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YCK7VH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJE6Q6' => 'arhy', 'AT1G28240' => 'ath', 'AT1G34550' => 'ath', 'AT1G53040' => 'ath', 'AT2G02910' => 'ath', 'AT4G09630' => 'ath', 'AT4G38500' => 'ath', 'AT5G42660' => 'ath', 'AT5G46220' => 'ath', 'ATR0152G026' => 'atr', 'ATR0564G343' => 'atr', 'ATR0706G151' => 'atr', 'ATR0733G207' => 'atr', 'ATR0751G234' => 'atr', 'ATR0807G048' => 'atr', 'ATR1091G084' => 'atr', 'Atru.chr10.1229' => 'acertr', 'Atru.chr10.1230' => 'acertr', 'Atru.chr10.1874' => 'acertr', 'Atru.chr11.1808' => 'acertr', 'Atru.chr13.1795' => 'acertr', 'Atru.chr13.570' => 'acertr', 'Atru.chr2.2608' => 'acertr', 'Atru.chr2.2609' => 'acertr', 'Atru.chr5.3428' => 'acertr', 'Atru.chr8.1171' => 'acertr', 'AUR62004651' => 'cqu', 'AUR62008675' => 'cqu', 'AUR62010014' => 'cqu', 'AUR62013004' => 'cqu', 'AUR62014825' => 'cqu', 'AUR62015015' => 'cqu', 'AUR62015151' => 'cqu', 'AUR62017020' => 'cqu', 'AUR62019422' => 'cqu', 'AUR62023570' => 'cqu', 'AUR62025571' => 'cqu', 'AUR62029098' => 'cqu', 'AUR62033863' => 'cqu', 'AUR62034296' => 'cqu', 'AUR62040075' => 'cqu', 'BcaB02g07334' => 'bca', 'BcaB02g10575' => 'bca', 'BcaB03g12119' => 'bca', 'BcaB03g12120' => 'bca', 'BcaB03g13945' => 'bca', 'BcaB04g17123' => 'bca', 'BcaB04g17867' => 'bca', 'BcaB04g19839' => 'bca', 'BcaB07g30317' => 'bca', 'BcaB07g32432' => 'bca', 'BcaB07g33362' => 'bca', 'BcaB08g36611' => 'bca', 'BcaC01g00028' => 'bca', 'BcaC01g01356' => 'bca', 'BcaC01g02034' => 'bca', 'BcaC01g06051' => 'bca', 'BcaC03g16839' => 'bca', 'BcaC03g17176' => 'bca', 'BcaC05g26829' => 'bca', 'BcaC06g31490' => 'bca', 'BcaC06g35344' => 'bca', 'BcaC06g36570' => 'bca', 'BcaC07g37537' => 'bca', 'BcaC08g43491' => 'bca', 'BcaC08g43773' => 'bca', 'BcaNung00234' => 'bca', 'BcaNung01982' => 'bca', 'BcaNung03707' => 'bca', 'BcaNung06454' => 'bca', 'BolC2t10762H' => 'bol', 'BolC2t11191H' => 'bol', 'BolC3t14322H' => 'bol', 'BolC3t19747H' => 'bol', 'BolC3t21425H' => 'bol', 'BolC4t27800H' => 'bol', 'BolC5t31423H' => 'bol', 'BolC6t35951H' => 'bol', 'BolC6t36282H' => 'bol', 'BolC7t40678H' => 'bol', 'BolC7t40679H' => 'bol', 'BolC7t42222H' => 'bol', 'BolC7t43492H' => 'bol', 'BolC7t46785H' => 'bol', 'BolC8t47853H' => 'bol', 'BolC9t56805H' => 'bol', 'BraA02t08000Z' => 'bra', 'BraA02t08341Z' => 'bra', 'BraA03t10936Z' => 'bra', 'BraA03t15657Z' => 'bra', 'BraA04t18100Z' => 'bra', 'BraA05t20523Z' => 'bra', 'BraA06t23353Z' => 'bra', 'BraA06t27473Z' => 'bra', 'BraA06t27769Z' => 'bra', 'BraA07t28928Z' => 'bra', 'BraA08t32236Z' => 'bra', 'BraA08t32841Z' => 'bra', 'BraA08t34524Z' => 'bra', 'BraA09t38742Z' => 'bra', 'BraA09t39295Z' => 'bra', 'C02p47180' => 'bna', 'C02p50990' => 'bna', 'C03p19360' => 'bna', 'C03p74950' => 'bna', 'C03p91000' => 'bna', 'C04p63260' => 'bna', 'C05p27050' => 'bna', 'C06p08750' => 'bna', 'C06p11490' => 'bna', 'C07p02820' => 'bna', 'C07p17180' => 'bna', 'C07p29440' => 'bna', 'C07p63730' => 'bna', 'C09p39260' => 'bna', 'CAN.G1164.34' => 'can', 'CAN.G1164.39' => 'can', 'CAN.G1530.3' => 'can', 'CAN.G162.61' => 'can', 'CAN.G176.6' => 'can', 'CAN.G289.49' => 'can', 'CAN.G370.21' => 'can', 'CAN.G370.22' => 'can', 'CAN.G371.117' => 'can', 'CAN.G58.37' => 'can', 'CAN.G588.98' => 'can', 'CANSAT21G2266' => 'cansat', 'CANSAT25G2799' => 'cansat', 'CANSAT35G0862' => 'cansat', 'CANSAT35G1704' => 'cansat', 'CANSAT35G1760' => 'cansat', 'CANSAT56G3971' => 'cansat', 'CANSAT56G4116' => 'cansat', 'CANSAT80G1259' => 'cansat', 'CARHR027730' => 'chi', 'CARHR033880' => 'chi', 'CARHR043270' => 'chi', 'CARHR145330' => 'chi', 'CARHR145340' => 'chi', 'CARHR175570' => 'chi', 'CARHR181570' => 'chi', 'CARHR258470' => 'chi', 'CARHR260490' => 'chi', 'CARHR294220' => 'chi', 'Carub.0001s2668' => 'cru', 'Carub.0001s3257' => 'cru', 'Carub.0001s4220' => 'cru', 'Carub.0005s0179' => 'cru', 'Carub.0006s2807' => 'cru', 'Carub.0007s0039' => 'cru', 'Carub.0008s0169' => 'cru', 'Carub.0008s0636' => 'cru', 'Ca_00338_v3' => 'car', 'Ca_00542_v3' => 'car', 'Ca_01844_v3' => 'car', 'Ca_10611_v3' => 'car', 'Ca_13326_v3' => 'car', 'Ca_17944_v3' => 'car', 'Ca_18546_v3' => 'car', 'Ca_24219_v3' => 'car', 'Ca_29972_v3' => 'car', 'CBR_g3681' => 'cbr', 'CBR_g40021' => 'cbr', 'Cc01_g08140' => 'ccan', 'Cc02_g13410' => 'ccan', 'Cc02_g37480' => 'ccan', 'Cc05_g12030' => 'ccan', 'Cc09_g03370' => 'ccan', 'Cc09_g10300' => 'ccan', 'Cc10_g03530' => 'ccan', 'Cc10_g11380' => 'ccan', 'CDE01G0176' => 'cde', 'CDE02G0675' => 'cde', 'CDE02G0942' => 'cde', 'CDE02G1153' => 'cde', 'CDE02G4177' => 'cde', 'CDE04G2117' => 'cde', 'CDE04G2736' => 'cde', 'CDE08G1161' => 'cde', 'CDE09G1238' => 'cde', 'Cfa000467' => 'cfa', 'Cfa000947' => 'cfa', 'Cfa004969' => 'cfa', 'Cfa005284' => 'cfa', 'Cfa008993' => 'cfa', 'Cfa018187' => 'cfa', 'Cfa018454' => 'cfa', 'Cfa020585' => 'cfa', 'Ciclev10000424m.g' => 'ccl', 'Ciclev10003605m.g' => 'ccl', 'Ciclev10007828m.g' => 'ccl', 'Ciclev10014620m.g' => 'ccl', 'Ciclev10015169m.g' => 'ccl', 'Ciclev10018291m.g' => 'ccl', 'Ciclev10028256m.g' => 'ccl', 'Ciclev10033822m.g' => 'ccl', 'CiPaw.05G060300' => 'cil', 'CiPaw.05G085000' => 'cil', 'CiPaw.06G083700' => 'cil', 'CiPaw.06G120300' => 'cil', 'CiPaw.09G060500' => 'cil', 'CiPaw.09G123800' => 'cil', 'CiPaw.11G169700' => 'cil', 'CiPaw.12G118300' => 'cil', 'CiPaw.15G071000' => 'cil', 'CiPaw.15G081900' => 'cil', 'ClCG01G024610' => 'cla', 'ClCG03G006070' => 'cla', 'ClCG05G019250' => 'cla', 'ClCG09G009500' => 'cla', 'ClCG11G008200' => 'cla', 'ClCG11G018080' => 'cla', 'COL.COLO4_17373' => 'col', 'COL.COLO4_22994' => 'col', 'COL.COLO4_26389' => 'col', 'COL.COLO4_27170' => 'col', 'COL.COLO4_31074' => 'col', 'COL.COLO4_31465' => 'col', 'COL.COLO4_36438' => 'col', 'COL.COLO4_36439' => 'col', 'Cpa.g.c38781' => 'cpa', 'Cpa.g.sc128.12' => 'cpa', 'Cpa.g.sc166.7' => 'cpa', 'Cpa.g.sc166.8' => 'cpa', 'Cpa.g.sc20.111' => 'cpa', 'Cpa.g.sc27.31' => 'cpa', 'Cpa.g.sc64.36' => 'cpa', 'Cpa.g.sc64.37' => 'cpa', 'Cpa.g.sc66.49' => 'cpa', 'Cpa.g.sc80.64' => 'cpa', 'CsaV3_1G012320' => 'csa', 'CsaV3_2G008480' => 'csa', 'CsaV3_2G033450' => 'csa', 'CsaV3_3G044830' => 'csa', 'CsaV3_4G033710' => 'csa', 'CsaV3_6G051730' => 'csa', 'CsaV3_7G025350' => 'csa', 'CSS0001067' => 'camsi', 'CSS0005996' => 'camsi', 'CSS0006590' => 'camsi', 'CSS0009673' => 'camsi', 'CSS0010201' => 'camsi', 'CSS0010549' => 'camsi', 'CSS0011364' => 'camsi', 'CSS0014473' => 'camsi', 'CSS0014961' => 'camsi', 'CSS0020191' => 'camsi', 'CSS0021165' => 'camsi', 'CSS0022306' => 'camsi', 'CSS0030591' => 'camsi', 'CSS0030696' => 'camsi', 'CSS0032653' => 'camsi', 'CSS0037487' => 'camsi', 'CSS0041102' => 'camsi', 'CSS0041261' => 'camsi', 'CSS0046246' => 'camsi', 'CSS0049256' => 'camsi', 'DCAR_004075' => 'dca', 'DCAR_011538' => 'dca', 'DCAR_019553' => 'dca', 'DCAR_020952' => 'dca', 'DCAR_021739' => 'dca', 'DCAR_027407' => 'dca', 'DCAR_027913' => 'dca', 'DCAR_028066' => 'dca', 'Dinv05899' => 'din', 'Dinv07563' => 'din', 'Dinv08010' => 'din', 'Dinv14125' => 'din', 'Dinv20172' => 'din', 'Dinv30743' => 'din', 'Dinv31229' => 'din', 'Dinv34162' => 'din', 'Dinv36028' => 'din', 'Dinv39368' => 'din', 'Dinv40565' => 'din', 'Dinv41706' => 'din', 'Duzib052G0089' => 'dzi', 'Duzib116G0641' => 'dzi', 'Duzib132G0069' => 'dzi', 'Duzib132G1219' => 'dzi', 'Duzib147G0278' => 'dzi', 'Duzib160G0480' => 'dzi', 'Duzib170G0661' => 'dzi', 'Duzib177G0591' => 'dzi', 'Duzib187G1353' => 'dzi', 'Duzib192G0858' => 'dzi', 'Duzib192G0883' => 'dzi', 'Duzib213G0506' => 'dzi', 'Duzib235G0289' => 'dzi', 'Duzib251G0422' => 'dzi', 'ECA232G3898' => 'eca', 'ECA233G5950' => 'eca', 'ECA234G1699' => 'eca', 'ECA234G2421' => 'eca', 'ECA236G0426' => 'eca', 'ECA236G4331' => 'eca', 'ECA248G2573' => 'eca', 'EL10Ac1g00077' => 'bvu', 'EL10Ac1g01746' => 'bvu', 'EL10Ac2g03464' => 'bvu', 'EL10Ac4g08176' => 'bvu', 'EL10Ac7g17521' => 'bvu', 'EL10Ac8g20386' => 'bvu', 'EL10Ac9g21343' => 'bvu', 'EL10Ac9g22688' => 'bvu', 'Eucgr.B03434' => 'egr', 'Eucgr.D00618' => 'egr', 'Eucgr.E02395' => 'egr', 'Eucgr.F01129' => 'egr', 'Eucgr.F02622' => 'egr', 'Eucgr.F04207' => 'egr', 'FAN01G0570' => 'fan', 'FAN03G3351' => 'fan', 'FAN06G3702' => 'fan', 'FAN07G2149' => 'fan', 'FAN10G3758' => 'fan', 'FAN11G1170' => 'fan', 'FAN11G2050' => 'fan', 'FAN11G2724' => 'fan', 'FAN12G1700' => 'fan', 'FAN12G2028' => 'fan', 'FAN15G1160' => 'fan', 'FAN15G3063' => 'fan', 'FAN16G2540' => 'fan', 'FAN16G3077' => 'fan', 'FAN16G3624' => 'fan', 'FAN17G0221' => 'fan', 'FAN20G2492' => 'fan', 'FAN20G2905' => 'fan', 'FAN21G0548' => 'fan', 'FAN21G1300' => 'fan', 'FAN22G0077' => 'fan', 'FAN22G1315' => 'fan', 'FAN24G1280' => 'fan', 'FAN24G1445' => 'fan', 'FAN24G3527' => 'fan', 'FAN25G0464' => 'fan', 'FAN25G2885' => 'fan', 'FAN25G3270' => 'fan', 'FAN27G1101' => 'fan', 'FAN27G2846' => 'fan', 'FAN27G3524' => 'fan', 'FvH4_2g11770' => 'fve', 'FvH4_2g15630' => 'fve', 'FvH4_3g05570' => 'fve', 'FvH4_3g09110' => 'fve', 'FvH4_3g19940' => 'fve', 'FvH4_4g04821' => 'fve', 'FvH4_4g31480' => 'fve', 'FvH4_7g01740' => 'fve', 'Glyma.05G130400' => 'gma', 'Glyma.05G156400' => 'gma', 'Glyma.07G197000' => 'gma', 'Glyma.08G085151' => 'gma', 'Glyma.08G114500' => 'gma', 'Glyma.08G300400' => 'gma', 'Glyma.10G215800' => 'gma', 'Glyma.12G224400' => 'gma', 'Glyma.13G179300' => 'gma', 'Glyma.13G218151' => 'gma', 'Glyma.13G238800' => 'gma', 'Glyma.13G276900' => 'gma', 'Glyma.14G078200' => 'gma', 'Glyma.15G074500' => 'gma', 'Glyma.15G094100' => 'gma', 'Glyma.17G247200' => 'gma', 'Glyma.18G120100' => 'gma', 'Glyma.20G176000' => 'gma', 'Gohir.A01G063600' => 'ghi', 'Gohir.A01G170301' => 'ghi', 'Gohir.A02G060500' => 'ghi', 'Gohir.A05G133850' => 'ghi', 'Gohir.A05G161400' => 'ghi', 'Gohir.A06G012900' => 'ghi', 'Gohir.A06G035901' => 'ghi', 'Gohir.A06G127100' => 'ghi', 'Gohir.A06G210500' => 'ghi', 'Gohir.A08G008650' => 'ghi', 'Gohir.A09G072700' => 'ghi', 'Gohir.A09G088301' => 'ghi', 'Gohir.A10G040600' => 'ghi', 'Gohir.A12G036300' => 'ghi', 'Gohir.A12G143350' => 'ghi', 'Gohir.A12G165500' => 'ghi', 'Gohir.A13G145700' => 'ghi', 'Gohir.D01G050000' => 'ghi', 'Gohir.D01G051366' => 'ghi', 'Gohir.D01G161350' => 'ghi', 'Gohir.D02G065900' => 'ghi', 'Gohir.D05G164200' => 'ghi', 'Gohir.D05G355500' => 'ghi', 'Gohir.D06G010400' => 'ghi', 'Gohir.D06G111250' => 'ghi', 'Gohir.D06G132000' => 'ghi', 'Gohir.D06G210500' => 'ghi', 'Gohir.D07G165675' => 'ghi', 'Gohir.D08G062240' => 'ghi', 'Gohir.D08G086101' => 'ghi', 'Gohir.D08G138060' => 'ghi', 'Gohir.D09G072300' => 'ghi', 'Gohir.D10G041400' => 'ghi', 'Gohir.D11G191020' => 'ghi', 'Gohir.D11G212066' => 'ghi', 'Gohir.D12G036300' => 'ghi', 'Gohir.D12G168600' => 'ghi', 'Gohir.D13G150600' => 'ghi', 'Gorai.001G057300' => 'gra', 'Gorai.002G069900' => 'gra', 'Gorai.002G200000' => 'gra', 'Gorai.003G067600' => 'gra', 'Gorai.005G074800' => 'gra', 'Gorai.006G087300' => 'gra', 'Gorai.008G037500' => 'gra', 'Gorai.008G181400' => 'gra', 'Gorai.009G169400' => 'gra', 'Gorai.009G387900' => 'gra', 'Gorai.010G013300' => 'gra', 'Gorai.010G153800' => 'gra', 'Gorai.010G255800' => 'gra', 'Gorai.011G043700' => 'gra', 'Gorai.011G198900' => 'gra', 'Gorai.013G168400' => 'gra', 'GSVIVG01005212001' => 'vvi', 'GSVIVG01006163001' => 'vvi', 'GSVIVG01009625001' => 'vvi', 'GSVIVG01014338001' => 'vvi', 'GSVIVG01020005001' => 'vvi', 'GSVIVG01021450001' => 'vvi', 'GSVIVG01023975001' => 'vvi', 'GSVIVG01034490001' => 'vvi', 'HanXRQChr04g0112071' => 'han', 'HanXRQChr05g0131151' => 'han', 'HanXRQChr09g0262371' => 'han', 'HanXRQChr09g0268401' => 'han', 'HanXRQChr10g0279241' => 'han', 'HanXRQChr10g0297961' => 'han', 'HanXRQChr11g0326231' => 'han', 'HanXRQChr11g0328471' => 'han', 'HanXRQChr16g0507941' => 'han', 'HanXRQChr17g0560211' => 'han', 'Haze_02108' => 'cav', 'Haze_02428' => 'cav', 'Haze_05593' => 'cav', 'Haze_06448' => 'cav', 'Haze_09427' => 'cav', 'Haze_12022' => 'cav', 'Haze_17612' => 'cav', 'Haze_17928' => 'cav', 'Hma1.2p1_0032F.1_g019250' => 'hma', 'Hma1.2p1_0163F.1_g072690' => 'hma', 'Hma1.2p1_0265F.1_g106710' => 'hma', 'Hma1.2p1_0286F.1_g113970' => 'hma', 'Hma1.2p1_0363F.1_g136640' => 'hma', 'Hma1.2p1_0584F.1_g183470' => 'hma', 'Hma1.2p1_0885F.1_g232570' => 'hma', 'HPP92_006022' => 'vpl', 'HPP92_007320' => 'vpl', 'HPP92_011521' => 'vpl', 'HPP92_019387' => 'vpl', 'HPP92_024038' => 'vpl', 'Hund05891' => 'sun', 'Hund06450' => 'sun', 'Hund12053' => 'sun', 'Hund16800' => 'sun', 'Hund21222' => 'sun', 'Hund22896' => 'sun', 'Hund23746' => 'sun', 'Hund27083' => 'sun', 'Lalb_Chr02g0141831' => 'lal', 'Lalb_Chr02g0141841' => 'lal', 'Lalb_Chr05g0220411' => 'lal', 'Lalb_Chr06g0162081' => 'lal', 'Lalb_Chr09g0327651' => 'lal', 'Lalb_Chr13g0295051' => 'lal', 'Lalb_Chr15g0086801' => 'lal', 'Lalb_Chr16g0383781' => 'lal', 'Lalb_Chr16g0383791' => 'lal', 'Lalb_Chr18g0055441' => 'lal', 'Lalb_Chr18g0059611' => 'lal', 'Lalb_Chr20g0109661' => 'lal', 'Lalb_Chr20g0109831' => 'lal', 'Lalb_Chr20g0121871' => 'lal', 'Lalb_Chr22g0355361' => 'lal', 'Lalb_Chr25g0286371' => 'lal', 'Lj1A1187G43' => 'lonja', 'Lj1A1205T50' => 'lonja', 'Lj1A800G33' => 'lonja', 'Lj1C1187T7' => 'lonja', 'Lj1C843T11' => 'lonja', 'Lj1g0010940' => 'lja', 'Lj2A288T69' => 'lonja', 'Lj3g0024276' => 'lja', 'Lj4A47T76' => 'lonja', 'Lj4g0005805' => 'lja', 'Lj4g0006097' => 'lja', 'Lj4g0008528' => 'lja', 'Lj4g0024907' => 'lja', 'Lj5g0012472' => 'lja', 'Lj5g0018648' => 'lja', 'Lj6C789G1' => 'lonja', 'Lj6g0004000' => 'lja', 'Lj7A292G67' => 'lonja', 'Lj7A292T64' => 'lonja', 'Lj9A400T58' => 'lonja', 'Lsat_1_v5_gn_1_126181' => 'lsa', 'Lsat_1_v5_gn_4_123041' => 'lsa', 'Lsat_1_v5_gn_4_133620' => 'lsa', 'Lsat_1_v5_gn_4_53221' => 'lsa', 'Lsat_1_v5_gn_4_71961' => 'lsa', 'Lsat_1_v5_gn_7_105241' => 'lsa', 'Lsat_1_v5_gn_7_21361' => 'lsa', 'Lsat_1_v5_gn_7_28860' => 'lsa', 'Lsat_1_v5_gn_7_31260' => 'lsa', 'Lsat_1_v5_gn_8_52801' => 'lsa', 'Manes.02G191400' => 'mes', 'Manes.03G110100' => 'mes', 'Manes.04G071100' => 'mes', 'Manes.05G100500' => 'mes', 'Manes.05G164700' => 'mes', 'Manes.15G087000' => 'mes', 'Manes.15G121500' => 'mes', 'Manes.16G028300' => 'mes', 'Manes.17G046100' => 'mes', 'Manes.17G069800' => 'mes', 'Manes.18G100500' => 'mes', 'Mapoly0002s0109' => 'mpo', 'Mapoly0024s0007' => 'mpo', 'Mapoly0089s0032' => 'mpo', 'MBI04_g42241_MAGBIO' => 'mbi', 'MBI05_g11988_MAGBIO' => 'mbi', 'MBI05_g35452_MAGBIO' => 'mbi', 'MBI07_g30179_MAGBIO' => 'mbi', 'MBI07_g35859_MAGBIO' => 'mbi', 'MBI07_g35860_MAGBIO' => 'mbi', 'MBI07_g37166_MAGBIO' => 'mbi', 'MBI08_g18172_MAGBIO' => 'mbi', 'MBI09_g08441_MAGBIO' => 'mbi', 'MBI13_g01676_MAGBIO' => 'mbi', 'MBI14_g42955_MAGBIO' => 'mbi', 'MBI16_g13161_MAGBIO' => 'mbi', 'MBI17_g27204_MAGBIO' => 'mbi', 'MBI19_g21595_MAGBIO' => 'mbi', 'MD00G1148400' => 'mdo', 'MD02G1301200' => 'mdo', 'MD03G1227800' => 'mdo', 'MD05G1041100' => 'mdo', 'MD05G1124800' => 'mdo', 'MD05G1284000' => 'mdo', 'MD05G1338800' => 'mdo', 'MD05G1338900' => 'mdo', 'MD07G1022800' => 'mdo', 'MD10G1047500' => 'mdo', 'MD10G1127500' => 'mdo', 'MD10G1262300' => 'mdo', 'MD10G1293800' => 'mdo', 'MD16G1074300' => 'mdo', 'Medtr1g021670' => 'mtr', 'Medtr1g096320' => 'mtr', 'Medtr2g013690' => 'mtr', 'Medtr2g019450' => 'mtr', 'Medtr2g085170' => 'mtr', 'Medtr4g088785' => 'mtr', 'Medtr8g055930' => 'mtr', 'Medtr8g085850' => 'mtr', 'MELO3C002605.2' => 'cme', 'MELO3C003891.2' => 'cme', 'MELO3C004012.2' => 'cme', 'MELO3C007134.2' => 'cme', 'MELO3C008118.2' => 'cme', 'MELO3C016700.2' => 'cme', 'MELO3C024127.2' => 'cme', 'MELO3C033361.2' => 'cme', 'MELO3C033362.2' => 'cme', 'Migut.C00430' => 'egut', 'Migut.C01246' => 'egut', 'Migut.E00101' => 'egut', 'Migut.H01486' => 'egut', 'Migut.H01939' => 'egut', 'Migut.K00360' => 'egut', 'Migut.M00910' => 'egut', 'Migut.M01139' => 'egut', 'Migut.N02677' => 'egut', 'MSTRG.13252' => 'ama', 'MSTRG.14701' => 'ama', 'MSTRG.1521' => 'ama', 'MSTRG.15884' => 'ama', 'MSTRG.16242' => 'ama', 'MSTRG.22285' => 'ama', 'MSTRG.22444' => 'ama', 'MSTRG.2349' => 'ama', 'MSTRG.26308' => 'ama', 'MSTRG.28296' => 'ama', 'MSTRG.9895' => 'ama', 'Nitab4.5_0000110g0060' => 'nta', 'Nitab4.5_0000420g0130' => 'nta', 'Nitab4.5_0000422g0030' => 'nta', 'Nitab4.5_0000560g0180' => 'nta', 'Nitab4.5_0000703g0100' => 'nta', 'Nitab4.5_0000786g0200' => 'nta', 'Nitab4.5_0001336g0020' => 'nta', 'Nitab4.5_0001796g0030' => 'nta', 'Nitab4.5_0003348g0060' => 'nta', 'Nitab4.5_0003698g0040' => 'nta', 'Nitab4.5_0003942g0090' => 'nta', 'Nitab4.5_0004775g0070' => 'nta', 'Nitab4.5_0004864g0030' => 'nta', 'Nitab4.5_0005615g0020' => 'nta', 'Nitab4.5_0009288g0030' => 'nta', 'Nitab4.5_0009341g0010' => 'nta', 'Nitab4.5_0009535g0010' => 'nta', 'Nn1g03995' => 'nnu', 'Nn1g04100' => 'nnu', 'Nn1g06530' => 'nnu', 'Nn3g16404' => 'nnu', 'Nn3g17212' => 'nnu', 'Nn3g20776' => 'nnu', 'Nn3g21923' => 'nnu', 'Nn5g27737' => 'nnu', 'Nn5g29461' => 'nnu', 'Nn7g38355' => 'nnu', 'Nn8g39873' => 'nnu', 'Oeu000548.2' => 'oeu', 'Oeu004672.1' => 'oeu', 'Oeu015605.2' => 'oeu', 'Oeu016092.1' => 'oeu', 'Oeu017879.3' => 'oeu', 'Oeu024910.1' => 'oeu', 'Oeu028965.1' => 'oeu', 'Oeu031269.1' => 'oeu', 'Oeu031270.1' => 'oeu', 'Oeu032535.1' => 'oeu', 'Oeu034151.1' => 'oeu', 'Oeu034152.1' => 'oeu', 'Oeu034588.2' => 'oeu', 'Oeu050846.1' => 'oeu', 'Oeu050849.2' => 'oeu', 'Oeu051063.2' => 'oeu', 'Oeu052368.1' => 'oeu', 'Oeu052370.1' => 'oeu', 'Os01g0210400' => 'osa', 'Os01g0304300' => 'osa', 'Os01g0749100' => 'osa', 'Os02g0745800' => 'osa', 'Os03g0769050' => 'osa', 'Os05g0531500' => 'osa', 'Os06g0724300' => 'osa', 'Os11g0198100' => 'osa', 'Peaxi162Scf00069g01425' => 'pax', 'Peaxi162Scf00280g00811' => 'pax', 'Peaxi162Scf00310g00615' => 'pax', 'Peaxi162Scf00362g00542' => 'pax', 'Peaxi162Scf00461g00310' => 'pax', 'Peaxi162Scf00530g00118' => 'pax', 'Peaxi162Scf00541g00057' => 'pax', 'Peaxi162Scf00661g00017' => 'pax', 'Peaxi162Scf00926g00027' => 'pax', 'Peaxi162Scf01064g00263' => 'pax', 'Peaxi162Scf01211g00135' => 'pax', 'PGR004G2336' => 'pgr', 'PGR042G0327' => 'pgr', 'PGR042G1957' => 'pgr', 'PGR042G2003' => 'pgr', 'PGR042G3929' => 'pgr', 'PGR083G1137' => 'pgr', 'PGR083G1364' => 'pgr', 'PGSC0003DMG400003381' => 'stu', 'PGSC0003DMG400003417' => 'stu', 'PGSC0003DMG400008981' => 'stu', 'PGSC0003DMG400012417' => 'stu', 'PGSC0003DMG400012823' => 'stu', 'PGSC0003DMG400016885' => 'stu', 'PGSC0003DMG400022812' => 'stu', 'PGSC0003DMG400029726' => 'stu', 'PGSC0003DMG401009243' => 'stu', 'PGSC0003DMG401031505' => 'stu', 'PGSC0003DMG402031505' => 'stu', 'Phvul.001G017600' => 'pvu', 'Phvul.002G193500' => 'pvu', 'Phvul.002G228900' => 'pvu', 'Phvul.002G236800' => 'pvu', 'Phvul.003G049500' => 'pvu', 'Phvul.005G072000' => 'pvu', 'Phvul.006G164800' => 'pvu', 'Phvul.006G185100' => 'pvu', 'Phvul.007G090000' => 'pvu', 'Potri.001G399800' => 'ptr', 'Potri.002G149900' => 'ptr', 'Potri.004G044100' => 'ptr', 'Potri.004G177600' => 'ptr', 'Potri.009G138000' => 'ptr', 'Potri.010G094000' => 'ptr', 'Potri.011G053000' => 'ptr', 'Potri.011G119300' => 'ptr', 'Potri.013G113700' => 'ptr', 'Potri.018G107800' => 'ptr', 'Potri.019G084100' => 'ptr', 'Pp3c14_23720' => 'ppa', 'Pp3c16_6340' => 'ppa', 'Pp3c23_13420' => 'ppa', 'Pp3c24_2740' => 'ppa', 'Pp3c25_860' => 'ppa', 'Pp3c8_21750' => 'ppa', 'Prupe.1G273000' => 'ppe', 'Prupe.1G273700' => 'ppe', 'Prupe.1G274100' => 'ppe', 'Prupe.2G023300' => 'ppe', 'Prupe.4G048000' => 'ppe', 'Prupe.4G080400' => 'ppe', 'Prupe.4G181200' => 'ppe', 'Prupe.8G056900' => 'ppe', 'Prupe.8G168700' => 'ppe', 'Psat1g189080' => 'psa', 'Psat1g204760' => 'psa', 'Psat4g175560' => 'psa', 'Psat4g177720' => 'psa', 'Psat5g244240' => 'psa', 'Psat6g010720' => 'psa', 'Psat6g187200' => 'psa', 'Psat7g072040' => 'psa', 'PSO017G3501' => 'pso', 'PSO063G2148' => 'pso', 'PSO063G5608' => 'pso', 'PSO210G6392' => 'pso', 'PSO541G2319' => 'pso', 'PSO541G2836' => 'pso', 'PSO541G4012' => 'pso', 'PSO541G6253' => 'pso', 'PSO675G0580' => 'pso', 'PSO675G0856' => 'pso', 'PSO675G5635' => 'pso', 'PSO675G9157' => 'pso', 'PSO832G1660' => 'pso', 'PSO832G1969' => 'pso', 'QL02p007186' => 'qlo', 'QL02p033904' => 'qlo', 'QL03p064391' => 'qlo', 'QL05p040593' => 'qlo', 'QL05p058242' => 'qlo', 'QL08p021825' => 'qlo', 'QL11p004981' => 'qlo', 'RcHm_v2.0_Chr1g0318301' => 'rch', 'RcHm_v2.0_Chr4g0418501' => 'rch', 'RcHm_v2.0_Chr4g0439971' => 'rch', 'RcHm_v2.0_Chr5g0008541' => 'rch', 'RcHm_v2.0_Chr5g0014101' => 'rch', 'RcHm_v2.0_Chr5g0014131' => 'rch', 'RcHm_v2.0_Chr5g0033621' => 'rch', 'RcHm_v2.0_Chr6g0272041' => 'rch', 'RcHm_v2.0_Chr6g0278831' => 'rch', 'Rhsim02G0130400' => 'rsi', 'Rhsim02G0171100' => 'rsi', 'Rhsim05G0053000' => 'rsi', 'Rhsim05G0053100' => 'rsi', 'Rhsim06G0096500' => 'rsi', 'Rhsim06G0096600' => 'rsi', 'Rhsim06G0199100' => 'rsi', 'Rhsim12G0062300' => 'rsi', 'Rhsim12G0062800' => 'rsi', 'Sabra02G0118600' => 'sbr', 'Sabra04G0027300' => 'sbr', 'Sabra04G0119500' => 'sbr', 'Sabra08G0112500' => 'sbr', 'Sabra11G0036800' => 'sbr', 'Sabra11G0103800' => 'sbr', 'Sabra13G0096300' => 'sbr', 'Sabra16G0262300' => 'sbr', 'Sabra18G0091700' => 'sbr', 'Sabra19G0095400' => 'sbr', 'SalBow6G3080' => 'sbo', 'SalBow7G1157' => 'sbo', 'SalBow7G2123' => 'sbo', 'SalBow7G2285' => 'sbo', 'SalBow7G3537' => 'sbo', 'SalBow8G2947' => 'sbo', 'SalBow8G4463' => 'sbo', 'SalBow8G5466' => 'sbo', 'Sc01g0001750' => 'sci', 'Sc02g0006640' => 'sci', 'Sc02g0006670' => 'sci', 'Sc04g0008220' => 'sci', 'Sc05g0006190' => 'sci', 'Sc08g0002760' => 'sci', 'Sc17g0006170' => 'sci', 'Sc22g0002050' => 'sci', 'Sc23g0001190' => 'sci', 'Sc24g0000980' => 'sci', 'Sed0006245' => 'sed', 'Sed0007543' => 'sed', 'Sed0009411' => 'sed', 'Sed0010765' => 'sed', 'Sed0012944' => 'sed', 'Sed0014682' => 'sed', 'Sed0016174' => 'sed', 'Sed0016796' => 'sed', 'Sed0020317' => 'sed', 'Sed0021467' => 'sed', 'SEGI_01316' => 'sgi', 'SEGI_03374' => 'sgi', 'SEGI_16265' => 'sgi', 'SEGI_18569' => 'sgi', 'SEGI_20351' => 'sgi', 'SEGI_26395' => 'sgi', 'SEGI_29469' => 'sgi', 'SEGI_34771' => 'sgi', 'SEGI_36769' => 'sgi', 'SEGI_37139' => 'sgi', 'SGA_v2.0_scaffold100G29687' => 'sas', 'SGA_v2.0_scaffold118G32472' => 'sas', 'SGA_v2.0_scaffold14G07051' => 'sas', 'SGA_v2.0_scaffold183G39845' => 'sas', 'SGA_v2.0_scaffold1G00174' => 'sas', 'SGA_v2.0_scaffold22G09714' => 'sas', 'SGA_v2.0_scaffold333G48992' => 'sas', 'SGA_v2.0_scaffold46G17491' => 'sas', 'SGA_v2.0_scaffold49G18294' => 'sas', 'SGA_v2.0_scaffold63G21658' => 'sas', 'SHI01741' => 'shi', 'SHI05771' => 'shi', 'SHI18077' => 'shi', 'SHI20525' => 'shi', 'SHI20527' => 'shi', 'SHI20528' => 'shi', 'SMO172G0185' => 'smo', 'SMO198G0020' => 'smo', 'SMO351G0006' => 'smo', 'SMO356G0118' => 'smo', 'SMO358G0296' => 'smo', 'SMO367G0079' => 'smo', 'SMO367G1277' => 'smo', 'Solyc01g014220.3' => 'sly', 'Solyc01g111770.2' => 'sly', 'Solyc02g078180.3' => 'sly', 'Solyc03g006430.3' => 'sly', 'Solyc03g006456.1' => 'sly', 'Solyc03g079860.2' => 'sly', 'Solyc04g079770.3' => 'sly', 'Solyc05g007430.4' => 'sly', 'Solyc07g063150.3' => 'sly', 'Solyc08g016620.3' => 'sly', 'Solyc09g057590.3' => 'sly', 'Solyc09g057600.1' => 'sly', 'Solyc10g009050.3' => 'sly', 'Solyc11g017420.2' => 'sly', 'Sopen01g053810' => 'spe', 'Sopen02g023040' => 'spe', 'Sopen03g002440' => 'spe', 'Sopen04g033350' => 'spe', 'Sopen05g003310' => 'spe', 'Sopen07g004050' => 'spe', 'Sopen07g031340' => 'spe', 'Sopen08g006990' => 'spe', 'Sopen10g004830' => 'spe', 'Sopen11g009370' => 'spe', 'Sp1g24450' => 'spa', 'Sp1g29670' => 'spa', 'Sp1g39600' => 'spa', 'Sp2g11080' => 'spa', 'Sp2g13970' => 'spa', 'Sp4g16130' => 'spa', 'Sp6g13080' => 'spa', 'Sp7g37270' => 'spa', 'TAR371G0065' => 'tar', 'TAR376G0340' => 'tar', 'TAR376G0435' => 'tar', 'TAR381G0002' => 'tar', 'TAR381G1236' => 'tar', 'TAR624G0055' => 'tar', 'TAR624G0324' => 'tar', 'TAR624G0696' => 'tar', 'TAR624G0906' => 'tar', 'TAR625G0107' => 'tar', 'TAR626G0015' => 'tar', 'TAR626G1356' => 'tar', 'TAR627G0888' => 'tar', 'TAR628G0399' => 'tar', 'TAR628G1327' => 'tar', 'TAR629G2831' => 'tar', 'TAR629G2874' => 'tar', 'TAR633G1432' => 'tar', 'TAR633G2771' => 'tar', 'THA.LOC104803394' => 'tha', 'THA.LOC104805153' => 'tha', 'THA.LOC104806784' => 'tha', 'THA.LOC104810473' => 'tha', 'THA.LOC104813100' => 'tha', 'THA.LOC104814215' => 'tha', 'THA.LOC104815554' => 'tha', 'THA.LOC104820544' => 'tha', 'THA.LOC104824754' => 'tha', 'THA.LOC104827717' => 'tha', 'Thecc.02G031400' => 'tca', 'Thecc.02G055900' => 'tca', 'Thecc.02G350800' => 'tca', 'Thecc.06G150900' => 'tca', 'Thecc.06G186600' => 'tca', 'Thecc.07G089600' => 'tca', 'Thecc.08G020400' => 'tca', 'Thecc.08G182100' => 'tca', 'Thhalv10000873m.g' => 'esa', 'Thhalv10004185m.g' => 'esa', 'Thhalv10006981m.g' => 'esa', 'Thhalv10007204m.g' => 'esa', 'Thhalv10011374m.g' => 'esa', 'Thhalv10013482m.g' => 'esa', 'Thhalv10017801m.g' => 'esa', 'Thhalv10024983m.g' => 'esa', 'TPR.G12072' => 'tpr', 'TPR.G15769' => 'tpr', 'TPR.G16504' => 'tpr', 'TPR.G16506' => 'tpr', 'TPR.G24345' => 'tpr', 'TPR.G26666' => 'tpr', 'TPR.G27320' => 'tpr', 'TPR.G31819' => 'tpr', 'TPR.G38879' => 'tpr', 'TPR.G39015' => 'tpr', 'TPR.G8819' => 'tpr', 'TWI09G0924' => 'twi', 'TWI12G0811' => 'twi', 'TWI12G1294' => 'twi', 'TWI31G0150' => 'twi', 'TWI36G1262' => 'twi', 'TWI38G1287' => 'twi', 'TWI38G1633' => 'twi', 'TWI38G1982' => 'twi', 'TWI39G0116' => 'twi', 'TWI60G1011' => 'twi', 'TWI63G0171' => 'twi', 'TWI73G0839' => 'twi', 'TWI79G1511' => 'twi', 'unitig_0.g915' => 'ugi', 'unitig_0.g916' => 'ugi', 'unitig_21.g20219' => 'ugi', 'unitig_21.g20416' => 'ugi', 'unitig_578.g16132' => 'ugi', 'unitig_578.g16718' => 'ugi', 'unitig_62.g23481' => 'ugi', 'unitig_744.g24535' => 'ugi', 'unitig_749.g13525' => 'ugi', 'vmacro01248' => 'vma', 'vmacro02290' => 'vma', 'vmacro10946' => 'vma', 'vmacro11865' => 'vma', 'vmacro12493' => 'vma', 'vmacro17322' => 'vma', 'vmacro21599' => 'vma', 'vmacro23041' => 'vma', 'VMungo0251G0004' => 'vmu', 'VMungo0251G2639' => 'vmu', 'VMungo0251G2967' => 'vmu', 'VMungo0540G0864' => 'vmu', 'VMungo0540G1569' => 'vmu', 'VMungo0647G0317' => 'vmu', 'VMungo0720G1373' => 'vmu', 'VMungo0720G1508' => 'vmu', 'VMungo1080G0485' => 'vmu', 'VMungo1215G3177' => 'vmu', 'Zm00001eb112600' => 'zma', 'Zm00001eb120220' => 'zma', 'Zm00001eb153240' => 'zma', 'Zm00001eb168880' => 'zma', 'Zm00001eb213920' => 'zma', 'Zm00001eb228280' => 'zma', 'Zm00001eb254580' => 'zma', 'Zm00001eb272180' => 'zma', 'Zm00001eb293190' => 'zma', 'Zm00001eb322930' => 'zma', 'Zm00001eb353360' => 'zma', 'Zm00001eb353390' => 'zma', 'Zm00001eb353430' => 'zma', 'Zm00001eb353440' => 'zma', 'Zm00001eb353780' => 'zma' ) $gf_id = 'HOM05D000499' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000499' ) $data_identifier = 'HOM05D000499' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 29, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 12, 'amhyb' => (int) 8, 'aly' => (int) 12, 'aox' => (int) 9, 'arhy' => (int) 26, 'ath' => (int) 8, 'atr' => (int) 7, 'acertr' => (int) 10, 'cqu' => (int) 15, 'bca' => (int) 29, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 11, 'cansat' => (int) 8, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 9, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 8, 'cpa' => (int) 10, 'csa' => (int) 7, 'camsi' => (int) 20, 'dca' => (int) 8, 'din' => (int) 12, 'dzi' => (int) 14, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 6, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 38, 'gra' => (int) 16, 'vvi' => (int) 8, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 5, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 11, 'lja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 11, 'mpo' => (int) 3, 'mbi' => (int) 14, 'mdo' => (int) 14, 'mtr' => (int) 8, 'cme' => (int) 9, 'egut' => (int) 9, 'ama' => (int) 11, 'nta' => (int) 17, 'nnu' => (int) 11, 'oeu' => (int) 18, 'osa' => (int) 8, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 6, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 9, 'rsi' => (int) 9, 'sbr' => (int) 10, 'sbo' => (int) 8, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 10, 'sas' => (int) 10, 'shi' => (int) 6, 'smo' => (int) 7, 'sly' => (int) 14, 'spe' => (int) 10, 'spa' => (int) 8, 'tar' => (int) 19, 'tha' => (int) 10, 'tca' => (int) 8, 'esa' => (int) 8, 'tpr' => (int) 11, 'twi' => (int) 13, 'ugi' => (int) 9, 'vma' => (int) 8, 'vmu' => (int) 10, 'zma' => (int) 15 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb353780' $species_info = array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ) $local_species = 'csa' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000499', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1066', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p29780' => 'bna', 'A02p33180' => 'bna', 'A03p16470' => 'bna', 'A03p66010' => 'bna', 'A04p25970' => 'bna', 'A06p01270' => 'bna', 'A06p46080' => 'bna', 'A07p11400' => 'bna', 'A08p01840' => 'bna', 'A08p08230' => 'bna', 'A08p25740' => 'bna', 'A09p32070' => 'bna', 'A09p37830' => 'bna', 'A09p42840' => 'bna', 'A09p42850' => 'bna', 'Aa31LG10G2060' => 'aar', 'Aa31LG2G7410' => 'aar', 'Aa31LG6G10200' => 'aar', 'Aa31LG6G16680' => 'aar', 'Aa31LG6G8470' => 'aar', 'Aa31LG9G12730' => 'aar', 'Aa31LG9G13680' => 'aar', 'Aa31LG9G14920' => 'aar', 'Aa31LG9G6650' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4977' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5467' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3254' => 'aag', 'Actinidia02578' => 'ach', 'Actinidia07693' => 'ach', 'Actinidia08413' => 'ach', 'Actinidia08414' => 'ach', 'Actinidia15289' => 'ach', 'Actinidia19871' => 'ach', 'Actinidia21475' => 'ach', 'Actinidia22576' => 'ach', 'Actinidia28327' => 'ach', 'Actinidia32491' => 'ach', 'Actinidia39463' => 'ach', 'Actinidia39571' => 'ach', 'Ah.01g013750' => 'amhyb', 'Ah.01g023210' => 'amhyb', 'Ah.04g164850' => 'amhyb', 'Ah.05g178060' => 'amhyb', 'Ah.07g204270' => 'amhyb', 'Ah.07g208480' => 'amhyb', 'Ah.09g237410' => 'amhyb', 'Ah.14g089460' => 'amhyb', 'AL1G41790' => 'aly', 'AL1G49050' => 'aly', 'AL1G53810' => 'aly', 'AL1G61400' => 'aly', 'AL4G18580' => 'aly', 'AL5G12510' => 'aly', 'AL5G12540' => 'aly', 'AL6G43230' => 'aly', 'AL7G10370' => 'aly', 'AL7G19250' => 'aly', 'AL8G12240' => 'aly', 'AL8G18540' => 'aly', 'Aqoxy1G02409' => 'aox', 'Aqoxy2G03993' => 'aox', 'Aqoxy3G03357' => 'aox', 'Aqoxy4G00785' => 'aox', 'Aqoxy5G02598' => 'aox', 'Aqoxy6G00132' => 'aox', 'Aqoxy7G01776' => 'aox', 'Aqoxy7G02316' => 'aox', 'Aqoxy7G03973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.12AFKW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B8730' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27IQR1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3F75VG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3RE0GA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41TCQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.527VTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FIR39' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5W8UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DA38EV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ63HS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H1I32C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HC27T5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4M8AP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7N3CZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9UVDZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LS1NQA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT1D4B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SKC4TM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCFV76' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF9Q1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQWD9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1ZM88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WE07RT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YCK7VH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJE6Q6' => 'arhy', 'AT1G28240' => 'ath', 'AT1G34550' => 'ath', 'AT1G53040' => 'ath', 'AT2G02910' => 'ath', 'AT4G09630' => 'ath', 'AT4G38500' => 'ath', 'AT5G42660' => 'ath', 'AT5G46220' => 'ath', 'ATR0152G026' => 'atr', 'ATR0564G343' => 'atr', 'ATR0706G151' => 'atr', 'ATR0733G207' => 'atr', 'ATR0751G234' => 'atr', 'ATR0807G048' => 'atr', 'ATR1091G084' => 'atr', 'Atru.chr10.1229' => 'acertr', 'Atru.chr10.1230' => 'acertr', 'Atru.chr10.1874' => 'acertr', 'Atru.chr11.1808' => 'acertr', 'Atru.chr13.1795' => 'acertr', 'Atru.chr13.570' => 'acertr', 'Atru.chr2.2608' => 'acertr', 'Atru.chr2.2609' => 'acertr', 'Atru.chr5.3428' => 'acertr', 'Atru.chr8.1171' => 'acertr', 'AUR62004651' => 'cqu', 'AUR62008675' => 'cqu', 'AUR62010014' => 'cqu', 'AUR62013004' => 'cqu', 'AUR62014825' => 'cqu', 'AUR62015015' => 'cqu', 'AUR62015151' => 'cqu', 'AUR62017020' => 'cqu', 'AUR62019422' => 'cqu', 'AUR62023570' => 'cqu', 'AUR62025571' => 'cqu', 'AUR62029098' => 'cqu', 'AUR62033863' => 'cqu', 'AUR62034296' => 'cqu', 'AUR62040075' => 'cqu', 'BcaB02g07334' => 'bca', 'BcaB02g10575' => 'bca', 'BcaB03g12119' => 'bca', 'BcaB03g12120' => 'bca', 'BcaB03g13945' => 'bca', 'BcaB04g17123' => 'bca', 'BcaB04g17867' => 'bca', 'BcaB04g19839' => 'bca', 'BcaB07g30317' => 'bca', 'BcaB07g32432' => 'bca', 'BcaB07g33362' => 'bca', 'BcaB08g36611' => 'bca', 'BcaC01g00028' => 'bca', 'BcaC01g01356' => 'bca', 'BcaC01g02034' => 'bca', 'BcaC01g06051' => 'bca', 'BcaC03g16839' => 'bca', 'BcaC03g17176' => 'bca', 'BcaC05g26829' => 'bca', 'BcaC06g31490' => 'bca', 'BcaC06g35344' => 'bca', 'BcaC06g36570' => 'bca', 'BcaC07g37537' => 'bca', 'BcaC08g43491' => 'bca', 'BcaC08g43773' => 'bca', 'BcaNung00234' => 'bca', 'BcaNung01982' => 'bca', 'BcaNung03707' => 'bca', 'BcaNung06454' => 'bca', 'BolC2t10762H' => 'bol', 'BolC2t11191H' => 'bol', 'BolC3t14322H' => 'bol', 'BolC3t19747H' => 'bol', 'BolC3t21425H' => 'bol', 'BolC4t27800H' => 'bol', 'BolC5t31423H' => 'bol', 'BolC6t35951H' => 'bol', 'BolC6t36282H' => 'bol', 'BolC7t40678H' => 'bol', 'BolC7t40679H' => 'bol', 'BolC7t42222H' => 'bol', 'BolC7t43492H' => 'bol', 'BolC7t46785H' => 'bol', 'BolC8t47853H' => 'bol', 'BolC9t56805H' => 'bol', 'BraA02t08000Z' => 'bra', 'BraA02t08341Z' => 'bra', 'BraA03t10936Z' => 'bra', 'BraA03t15657Z' => 'bra', 'BraA04t18100Z' => 'bra', 'BraA05t20523Z' => 'bra', 'BraA06t23353Z' => 'bra', 'BraA06t27473Z' => 'bra', 'BraA06t27769Z' => 'bra', 'BraA07t28928Z' => 'bra', 'BraA08t32236Z' => 'bra', 'BraA08t32841Z' => 'bra', 'BraA08t34524Z' => 'bra', 'BraA09t38742Z' => 'bra', 'BraA09t39295Z' => 'bra', 'C02p47180' => 'bna', 'C02p50990' => 'bna', 'C03p19360' => 'bna', 'C03p74950' => 'bna', 'C03p91000' => 'bna', 'C04p63260' => 'bna', 'C05p27050' => 'bna', 'C06p08750' => 'bna', 'C06p11490' => 'bna', 'C07p02820' => 'bna', 'C07p17180' => 'bna', 'C07p29440' => 'bna', 'C07p63730' => 'bna', 'C09p39260' => 'bna', 'CAN.G1164.34' => 'can', 'CAN.G1164.39' => 'can', 'CAN.G1530.3' => 'can', 'CAN.G162.61' => 'can', 'CAN.G176.6' => 'can', 'CAN.G289.49' => 'can', 'CAN.G370.21' => 'can', 'CAN.G370.22' => 'can', 'CAN.G371.117' => 'can', 'CAN.G58.37' => 'can', 'CAN.G588.98' => 'can', 'CANSAT21G2266' => 'cansat', 'CANSAT25G2799' => 'cansat', 'CANSAT35G0862' => 'cansat', 'CANSAT35G1704' => 'cansat', 'CANSAT35G1760' => 'cansat', 'CANSAT56G3971' => 'cansat', 'CANSAT56G4116' => 'cansat', 'CANSAT80G1259' => 'cansat', 'CARHR027730' => 'chi', 'CARHR033880' => 'chi', 'CARHR043270' => 'chi', 'CARHR145330' => 'chi', 'CARHR145340' => 'chi', 'CARHR175570' => 'chi', 'CARHR181570' => 'chi', 'CARHR258470' => 'chi', 'CARHR260490' => 'chi', 'CARHR294220' => 'chi', 'Carub.0001s2668' => 'cru', 'Carub.0001s3257' => 'cru', 'Carub.0001s4220' => 'cru', 'Carub.0005s0179' => 'cru', 'Carub.0006s2807' => 'cru', 'Carub.0007s0039' => 'cru', 'Carub.0008s0169' => 'cru', 'Carub.0008s0636' => 'cru', 'Ca_00338_v3' => 'car', 'Ca_00542_v3' => 'car', 'Ca_01844_v3' => 'car', 'Ca_10611_v3' => 'car', 'Ca_13326_v3' => 'car', 'Ca_17944_v3' => 'car', 'Ca_18546_v3' => 'car', 'Ca_24219_v3' => 'car', 'Ca_29972_v3' => 'car', 'CBR_g3681' => 'cbr', 'CBR_g40021' => 'cbr', 'Cc01_g08140' => 'ccan', 'Cc02_g13410' => 'ccan', 'Cc02_g37480' => 'ccan', 'Cc05_g12030' => 'ccan', 'Cc09_g03370' => 'ccan', 'Cc09_g10300' => 'ccan', 'Cc10_g03530' => 'ccan', 'Cc10_g11380' => 'ccan', 'CDE01G0176' => 'cde', 'CDE02G0675' => 'cde', 'CDE02G0942' => 'cde', 'CDE02G1153' => 'cde', 'CDE02G4177' => 'cde', 'CDE04G2117' => 'cde', 'CDE04G2736' => 'cde', 'CDE08G1161' => 'cde', 'CDE09G1238' => 'cde', 'Cfa000467' => 'cfa', 'Cfa000947' => 'cfa', 'Cfa004969' => 'cfa', 'Cfa005284' => 'cfa', 'Cfa008993' => 'cfa', 'Cfa018187' => 'cfa', 'Cfa018454' => 'cfa', 'Cfa020585' => 'cfa', 'Ciclev10000424m.g' => 'ccl', 'Ciclev10003605m.g' => 'ccl', 'Ciclev10007828m.g' => 'ccl', 'Ciclev10014620m.g' => 'ccl', 'Ciclev10015169m.g' => 'ccl', 'Ciclev10018291m.g' => 'ccl', 'Ciclev10028256m.g' => 'ccl', 'Ciclev10033822m.g' => 'ccl', 'CiPaw.05G060300' => 'cil', 'CiPaw.05G085000' => 'cil', 'CiPaw.06G083700' => 'cil', 'CiPaw.06G120300' => 'cil', 'CiPaw.09G060500' => 'cil', 'CiPaw.09G123800' => 'cil', 'CiPaw.11G169700' => 'cil', 'CiPaw.12G118300' => 'cil', 'CiPaw.15G071000' => 'cil', 'CiPaw.15G081900' => 'cil', 'ClCG01G024610' => 'cla', 'ClCG03G006070' => 'cla', 'ClCG05G019250' => 'cla', 'ClCG09G009500' => 'cla', 'ClCG11G008200' => 'cla', 'ClCG11G018080' => 'cla', 'COL.COLO4_17373' => 'col', 'COL.COLO4_22994' => 'col', 'COL.COLO4_26389' => 'col', 'COL.COLO4_27170' => 'col', 'COL.COLO4_31074' => 'col', 'COL.COLO4_31465' => 'col', 'COL.COLO4_36438' => 'col', 'COL.COLO4_36439' => 'col', 'Cpa.g.c38781' => 'cpa', 'Cpa.g.sc128.12' => 'cpa', 'Cpa.g.sc166.7' => 'cpa', 'Cpa.g.sc166.8' => 'cpa', 'Cpa.g.sc20.111' => 'cpa', 'Cpa.g.sc27.31' => 'cpa', 'Cpa.g.sc64.36' => 'cpa', 'Cpa.g.sc64.37' => 'cpa', 'Cpa.g.sc66.49' => 'cpa', 'Cpa.g.sc80.64' => 'cpa', 'CsaV3_1G012320' => 'csa', 'CsaV3_2G008480' => 'csa', 'CsaV3_2G033450' => 'csa', 'CsaV3_3G044830' => 'csa', 'CsaV3_4G033710' => 'csa', 'CsaV3_6G051730' => 'csa', 'CsaV3_7G025350' => 'csa', 'CSS0001067' => 'camsi', 'CSS0005996' => 'camsi', 'CSS0006590' => 'camsi', 'CSS0009673' => 'camsi', 'CSS0010201' => 'camsi', 'CSS0010549' => 'camsi', 'CSS0011364' => 'camsi', 'CSS0014473' => 'camsi', 'CSS0014961' => 'camsi', 'CSS0020191' => 'camsi', 'CSS0021165' => 'camsi', 'CSS0022306' => 'camsi', 'CSS0030591' => 'camsi', 'CSS0030696' => 'camsi', 'CSS0032653' => 'camsi', 'CSS0037487' => 'camsi', 'CSS0041102' => 'camsi', 'CSS0041261' => 'camsi', 'CSS0046246' => 'camsi', 'CSS0049256' => 'camsi', 'DCAR_004075' => 'dca', 'DCAR_011538' => 'dca', 'DCAR_019553' => 'dca', 'DCAR_020952' => 'dca', 'DCAR_021739' => 'dca', 'DCAR_027407' => 'dca', 'DCAR_027913' => 'dca', 'DCAR_028066' => 'dca', 'Dinv05899' => 'din', 'Dinv07563' => 'din', 'Dinv08010' => 'din', 'Dinv14125' => 'din', 'Dinv20172' => 'din', 'Dinv30743' => 'din', 'Dinv31229' => 'din', 'Dinv34162' => 'din', 'Dinv36028' => 'din', 'Dinv39368' => 'din', 'Dinv40565' => 'din', 'Dinv41706' => 'din', 'Duzib052G0089' => 'dzi', 'Duzib116G0641' => 'dzi', 'Duzib132G0069' => 'dzi', 'Duzib132G1219' => 'dzi', 'Duzib147G0278' => 'dzi', 'Duzib160G0480' => 'dzi', 'Duzib170G0661' => 'dzi', 'Duzib177G0591' => 'dzi', 'Duzib187G1353' => 'dzi', 'Duzib192G0858' => 'dzi', 'Duzib192G0883' => 'dzi', 'Duzib213G0506' => 'dzi', 'Duzib235G0289' => 'dzi', 'Duzib251G0422' => 'dzi', 'ECA232G3898' => 'eca', 'ECA233G5950' => 'eca', 'ECA234G1699' => 'eca', 'ECA234G2421' => 'eca', 'ECA236G0426' => 'eca', 'ECA236G4331' => 'eca', 'ECA248G2573' => 'eca', 'EL10Ac1g00077' => 'bvu', 'EL10Ac1g01746' => 'bvu', 'EL10Ac2g03464' => 'bvu', 'EL10Ac4g08176' => 'bvu', 'EL10Ac7g17521' => 'bvu', 'EL10Ac8g20386' => 'bvu', 'EL10Ac9g21343' => 'bvu', 'EL10Ac9g22688' => 'bvu', 'Eucgr.B03434' => 'egr', 'Eucgr.D00618' => 'egr', 'Eucgr.E02395' => 'egr', 'Eucgr.F01129' => 'egr', 'Eucgr.F02622' => 'egr', 'Eucgr.F04207' => 'egr', 'FAN01G0570' => 'fan', 'FAN03G3351' => 'fan', 'FAN06G3702' => 'fan', 'FAN07G2149' => 'fan', 'FAN10G3758' => 'fan', 'FAN11G1170' => 'fan', 'FAN11G2050' => 'fan', 'FAN11G2724' => 'fan', 'FAN12G1700' => 'fan', 'FAN12G2028' => 'fan', 'FAN15G1160' => 'fan', 'FAN15G3063' => 'fan', 'FAN16G2540' => 'fan', 'FAN16G3077' => 'fan', 'FAN16G3624' => 'fan', 'FAN17G0221' => 'fan', 'FAN20G2492' => 'fan', 'FAN20G2905' => 'fan', 'FAN21G0548' => 'fan', 'FAN21G1300' => 'fan', 'FAN22G0077' => 'fan', 'FAN22G1315' => 'fan', 'FAN24G1280' => 'fan', 'FAN24G1445' => 'fan', 'FAN24G3527' => 'fan', 'FAN25G0464' => 'fan', 'FAN25G2885' => 'fan', 'FAN25G3270' => 'fan', 'FAN27G1101' => 'fan', 'FAN27G2846' => 'fan', 'FAN27G3524' => 'fan', 'FvH4_2g11770' => 'fve', 'FvH4_2g15630' => 'fve', 'FvH4_3g05570' => 'fve', 'FvH4_3g09110' => 'fve', 'FvH4_3g19940' => 'fve', 'FvH4_4g04821' => 'fve', 'FvH4_4g31480' => 'fve', 'FvH4_7g01740' => 'fve', 'Glyma.05G130400' => 'gma', 'Glyma.05G156400' => 'gma', 'Glyma.07G197000' => 'gma', 'Glyma.08G085151' => 'gma', 'Glyma.08G114500' => 'gma', 'Glyma.08G300400' => 'gma', 'Glyma.10G215800' => 'gma', 'Glyma.12G224400' => 'gma', 'Glyma.13G179300' => 'gma', 'Glyma.13G218151' => 'gma', 'Glyma.13G238800' => 'gma', 'Glyma.13G276900' => 'gma', 'Glyma.14G078200' => 'gma', 'Glyma.15G074500' => 'gma', 'Glyma.15G094100' => 'gma', 'Glyma.17G247200' => 'gma', 'Glyma.18G120100' => 'gma', 'Glyma.20G176000' => 'gma', 'Gohir.A01G063600' => 'ghi', 'Gohir.A01G170301' => 'ghi', 'Gohir.A02G060500' => 'ghi', 'Gohir.A05G133850' => 'ghi', 'Gohir.A05G161400' => 'ghi', 'Gohir.A06G012900' => 'ghi', 'Gohir.A06G035901' => 'ghi', 'Gohir.A06G127100' => 'ghi', 'Gohir.A06G210500' => 'ghi', 'Gohir.A08G008650' => 'ghi', 'Gohir.A09G072700' => 'ghi', 'Gohir.A09G088301' => 'ghi', 'Gohir.A10G040600' => 'ghi', 'Gohir.A12G036300' => 'ghi', 'Gohir.A12G143350' => 'ghi', 'Gohir.A12G165500' => 'ghi', 'Gohir.A13G145700' => 'ghi', 'Gohir.D01G050000' => 'ghi', 'Gohir.D01G051366' => 'ghi', 'Gohir.D01G161350' => 'ghi', 'Gohir.D02G065900' => 'ghi', 'Gohir.D05G164200' => 'ghi', 'Gohir.D05G355500' => 'ghi', 'Gohir.D06G010400' => 'ghi', 'Gohir.D06G111250' => 'ghi', 'Gohir.D06G132000' => 'ghi', 'Gohir.D06G210500' => 'ghi', 'Gohir.D07G165675' => 'ghi', 'Gohir.D08G062240' => 'ghi', 'Gohir.D08G086101' => 'ghi', 'Gohir.D08G138060' => 'ghi', 'Gohir.D09G072300' => 'ghi', 'Gohir.D10G041400' => 'ghi', 'Gohir.D11G191020' => 'ghi', 'Gohir.D11G212066' => 'ghi', 'Gohir.D12G036300' => 'ghi', 'Gohir.D12G168600' => 'ghi', 'Gohir.D13G150600' => 'ghi', 'Gorai.001G057300' => 'gra', 'Gorai.002G069900' => 'gra', 'Gorai.002G200000' => 'gra', 'Gorai.003G067600' => 'gra', 'Gorai.005G074800' => 'gra', 'Gorai.006G087300' => 'gra', 'Gorai.008G037500' => 'gra', 'Gorai.008G181400' => 'gra', 'Gorai.009G169400' => 'gra', 'Gorai.009G387900' => 'gra', 'Gorai.010G013300' => 'gra', 'Gorai.010G153800' => 'gra', 'Gorai.010G255800' => 'gra', 'Gorai.011G043700' => 'gra', 'Gorai.011G198900' => 'gra', 'Gorai.013G168400' => 'gra', 'GSVIVG01005212001' => 'vvi', 'GSVIVG01006163001' => 'vvi', 'GSVIVG01009625001' => 'vvi', 'GSVIVG01014338001' => 'vvi', 'GSVIVG01020005001' => 'vvi', 'GSVIVG01021450001' => 'vvi', 'GSVIVG01023975001' => 'vvi', 'GSVIVG01034490001' => 'vvi', 'HanXRQChr04g0112071' => 'han', 'HanXRQChr05g0131151' => 'han', 'HanXRQChr09g0262371' => 'han', 'HanXRQChr09g0268401' => 'han', 'HanXRQChr10g0279241' => 'han', 'HanXRQChr10g0297961' => 'han', 'HanXRQChr11g0326231' => 'han', 'HanXRQChr11g0328471' => 'han', 'HanXRQChr16g0507941' => 'han', 'HanXRQChr17g0560211' => 'han', 'Haze_02108' => 'cav', 'Haze_02428' => 'cav', 'Haze_05593' => 'cav', 'Haze_06448' => 'cav', 'Haze_09427' => 'cav', 'Haze_12022' => 'cav', 'Haze_17612' => 'cav', 'Haze_17928' => 'cav', 'Hma1.2p1_0032F.1_g019250' => 'hma', 'Hma1.2p1_0163F.1_g072690' => 'hma', 'Hma1.2p1_0265F.1_g106710' => 'hma', 'Hma1.2p1_0286F.1_g113970' => 'hma', 'Hma1.2p1_0363F.1_g136640' => 'hma', 'Hma1.2p1_0584F.1_g183470' => 'hma', 'Hma1.2p1_0885F.1_g232570' => 'hma', 'HPP92_006022' => 'vpl', 'HPP92_007320' => 'vpl', 'HPP92_011521' => 'vpl', 'HPP92_019387' => 'vpl', 'HPP92_024038' => 'vpl', 'Hund05891' => 'sun', 'Hund06450' => 'sun', 'Hund12053' => 'sun', 'Hund16800' => 'sun', 'Hund21222' => 'sun', 'Hund22896' => 'sun', 'Hund23746' => 'sun', 'Hund27083' => 'sun', 'Lalb_Chr02g0141831' => 'lal', 'Lalb_Chr02g0141841' => 'lal', 'Lalb_Chr05g0220411' => 'lal', 'Lalb_Chr06g0162081' => 'lal', 'Lalb_Chr09g0327651' => 'lal', 'Lalb_Chr13g0295051' => 'lal', 'Lalb_Chr15g0086801' => 'lal', 'Lalb_Chr16g0383781' => 'lal', 'Lalb_Chr16g0383791' => 'lal', 'Lalb_Chr18g0055441' => 'lal', 'Lalb_Chr18g0059611' => 'lal', 'Lalb_Chr20g0109661' => 'lal', 'Lalb_Chr20g0109831' => 'lal', 'Lalb_Chr20g0121871' => 'lal', 'Lalb_Chr22g0355361' => 'lal', 'Lalb_Chr25g0286371' => 'lal', 'Lj1A1187G43' => 'lonja', 'Lj1A1205T50' => 'lonja', 'Lj1A800G33' => 'lonja', 'Lj1C1187T7' => 'lonja', 'Lj1C843T11' => 'lonja', 'Lj1g0010940' => 'lja', 'Lj2A288T69' => 'lonja', 'Lj3g0024276' => 'lja', 'Lj4A47T76' => 'lonja', 'Lj4g0005805' => 'lja', 'Lj4g0006097' => 'lja', 'Lj4g0008528' => 'lja', 'Lj4g0024907' => 'lja', 'Lj5g0012472' => 'lja', 'Lj5g0018648' => 'lja', 'Lj6C789G1' => 'lonja', 'Lj6g0004000' => 'lja', 'Lj7A292G67' => 'lonja', 'Lj7A292T64' => 'lonja', 'Lj9A400T58' => 'lonja', 'Lsat_1_v5_gn_1_126181' => 'lsa', 'Lsat_1_v5_gn_4_123041' => 'lsa', 'Lsat_1_v5_gn_4_133620' => 'lsa', 'Lsat_1_v5_gn_4_53221' => 'lsa', 'Lsat_1_v5_gn_4_71961' => 'lsa', 'Lsat_1_v5_gn_7_105241' => 'lsa', 'Lsat_1_v5_gn_7_21361' => 'lsa', 'Lsat_1_v5_gn_7_28860' => 'lsa', 'Lsat_1_v5_gn_7_31260' => 'lsa', 'Lsat_1_v5_gn_8_52801' => 'lsa', 'Manes.02G191400' => 'mes', 'Manes.03G110100' => 'mes', 'Manes.04G071100' => 'mes', 'Manes.05G100500' => 'mes', 'Manes.05G164700' => 'mes', 'Manes.15G087000' => 'mes', 'Manes.15G121500' => 'mes', 'Manes.16G028300' => 'mes', 'Manes.17G046100' => 'mes', 'Manes.17G069800' => 'mes', 'Manes.18G100500' => 'mes', 'Mapoly0002s0109' => 'mpo', 'Mapoly0024s0007' => 'mpo', 'Mapoly0089s0032' => 'mpo', 'MBI04_g42241_MAGBIO' => 'mbi', 'MBI05_g11988_MAGBIO' => 'mbi', 'MBI05_g35452_MAGBIO' => 'mbi', 'MBI07_g30179_MAGBIO' => 'mbi', 'MBI07_g35859_MAGBIO' => 'mbi', 'MBI07_g35860_MAGBIO' => 'mbi', 'MBI07_g37166_MAGBIO' => 'mbi', 'MBI08_g18172_MAGBIO' => 'mbi', 'MBI09_g08441_MAGBIO' => 'mbi', 'MBI13_g01676_MAGBIO' => 'mbi', 'MBI14_g42955_MAGBIO' => 'mbi', 'MBI16_g13161_MAGBIO' => 'mbi', 'MBI17_g27204_MAGBIO' => 'mbi', 'MBI19_g21595_MAGBIO' => 'mbi', 'MD00G1148400' => 'mdo', 'MD02G1301200' => 'mdo', 'MD03G1227800' => 'mdo', 'MD05G1041100' => 'mdo', 'MD05G1124800' => 'mdo', 'MD05G1284000' => 'mdo', 'MD05G1338800' => 'mdo', 'MD05G1338900' => 'mdo', 'MD07G1022800' => 'mdo', 'MD10G1047500' => 'mdo', 'MD10G1127500' => 'mdo', 'MD10G1262300' => 'mdo', 'MD10G1293800' => 'mdo', 'MD16G1074300' => 'mdo', 'Medtr1g021670' => 'mtr', 'Medtr1g096320' => 'mtr', 'Medtr2g013690' => 'mtr', 'Medtr2g019450' => 'mtr', 'Medtr2g085170' => 'mtr', 'Medtr4g088785' => 'mtr', 'Medtr8g055930' => 'mtr', 'Medtr8g085850' => 'mtr', 'MELO3C002605.2' => 'cme', 'MELO3C003891.2' => 'cme', 'MELO3C004012.2' => 'cme', 'MELO3C007134.2' => 'cme', 'MELO3C008118.2' => 'cme', 'MELO3C016700.2' => 'cme', 'MELO3C024127.2' => 'cme', 'MELO3C033361.2' => 'cme', 'MELO3C033362.2' => 'cme', 'Migut.C00430' => 'egut', 'Migut.C01246' => 'egut', 'Migut.E00101' => 'egut', 'Migut.H01486' => 'egut', 'Migut.H01939' => 'egut', 'Migut.K00360' => 'egut', 'Migut.M00910' => 'egut', 'Migut.M01139' => 'egut', 'Migut.N02677' => 'egut', 'MSTRG.13252' => 'ama', 'MSTRG.14701' => 'ama', 'MSTRG.1521' => 'ama', 'MSTRG.15884' => 'ama', 'MSTRG.16242' => 'ama', 'MSTRG.22285' => 'ama', 'MSTRG.22444' => 'ama', 'MSTRG.2349' => 'ama', 'MSTRG.26308' => 'ama', 'MSTRG.28296' => 'ama', 'MSTRG.9895' => 'ama', 'Nitab4.5_0000110g0060' => 'nta', 'Nitab4.5_0000420g0130' => 'nta', 'Nitab4.5_0000422g0030' => 'nta', 'Nitab4.5_0000560g0180' => 'nta', 'Nitab4.5_0000703g0100' => 'nta', 'Nitab4.5_0000786g0200' => 'nta', 'Nitab4.5_0001336g0020' => 'nta', 'Nitab4.5_0001796g0030' => 'nta', 'Nitab4.5_0003348g0060' => 'nta', 'Nitab4.5_0003698g0040' => 'nta', 'Nitab4.5_0003942g0090' => 'nta', 'Nitab4.5_0004775g0070' => 'nta', 'Nitab4.5_0004864g0030' => 'nta', 'Nitab4.5_0005615g0020' => 'nta', 'Nitab4.5_0009288g0030' => 'nta', 'Nitab4.5_0009341g0010' => 'nta', 'Nitab4.5_0009535g0010' => 'nta', 'Nn1g03995' => 'nnu', 'Nn1g04100' => 'nnu', 'Nn1g06530' => 'nnu', 'Nn3g16404' => 'nnu', 'Nn3g17212' => 'nnu', 'Nn3g20776' => 'nnu', 'Nn3g21923' => 'nnu', 'Nn5g27737' => 'nnu', 'Nn5g29461' => 'nnu', 'Nn7g38355' => 'nnu', 'Nn8g39873' => 'nnu', 'Oeu000548.2' => 'oeu', 'Oeu004672.1' => 'oeu', 'Oeu015605.2' => 'oeu', 'Oeu016092.1' => 'oeu', 'Oeu017879.3' => 'oeu', 'Oeu024910.1' => 'oeu', 'Oeu028965.1' => 'oeu', 'Oeu031269.1' => 'oeu', 'Oeu031270.1' => 'oeu', 'Oeu032535.1' => 'oeu', 'Oeu034151.1' => 'oeu', 'Oeu034152.1' => 'oeu', 'Oeu034588.2' => 'oeu', 'Oeu050846.1' => 'oeu', 'Oeu050849.2' => 'oeu', 'Oeu051063.2' => 'oeu', 'Oeu052368.1' => 'oeu', 'Oeu052370.1' => 'oeu', 'Os01g0210400' => 'osa', 'Os01g0304300' => 'osa', 'Os01g0749100' => 'osa', 'Os02g0745800' => 'osa', 'Os03g0769050' => 'osa', 'Os05g0531500' => 'osa', 'Os06g0724300' => 'osa', 'Os11g0198100' => 'osa', 'Peaxi162Scf00069g01425' => 'pax', 'Peaxi162Scf00280g00811' => 'pax', 'Peaxi162Scf00310g00615' => 'pax', 'Peaxi162Scf00362g00542' => 'pax', 'Peaxi162Scf00461g00310' => 'pax', 'Peaxi162Scf00530g00118' => 'pax', 'Peaxi162Scf00541g00057' => 'pax', 'Peaxi162Scf00661g00017' => 'pax', 'Peaxi162Scf00926g00027' => 'pax', 'Peaxi162Scf01064g00263' => 'pax', 'Peaxi162Scf01211g00135' => 'pax', 'PGR004G2336' => 'pgr', 'PGR042G0327' => 'pgr', 'PGR042G1957' => 'pgr', 'PGR042G2003' => 'pgr', 'PGR042G3929' => 'pgr', 'PGR083G1137' => 'pgr', 'PGR083G1364' => 'pgr', 'PGSC0003DMG400003381' => 'stu', 'PGSC0003DMG400003417' => 'stu', 'PGSC0003DMG400008981' => 'stu', 'PGSC0003DMG400012417' => 'stu', 'PGSC0003DMG400012823' => 'stu', 'PGSC0003DMG400016885' => 'stu', 'PGSC0003DMG400022812' => 'stu', 'PGSC0003DMG400029726' => 'stu', 'PGSC0003DMG401009243' => 'stu', 'PGSC0003DMG401031505' => 'stu', 'PGSC0003DMG402031505' => 'stu', 'Phvul.001G017600' => 'pvu', 'Phvul.002G193500' => 'pvu', 'Phvul.002G228900' => 'pvu', 'Phvul.002G236800' => 'pvu', 'Phvul.003G049500' => 'pvu', 'Phvul.005G072000' => 'pvu', 'Phvul.006G164800' => 'pvu', 'Phvul.006G185100' => 'pvu', 'Phvul.007G090000' => 'pvu', 'Potri.001G399800' => 'ptr', 'Potri.002G149900' => 'ptr', 'Potri.004G044100' => 'ptr', 'Potri.004G177600' => 'ptr', 'Potri.009G138000' => 'ptr', 'Potri.010G094000' => 'ptr', 'Potri.011G053000' => 'ptr', 'Potri.011G119300' => 'ptr', 'Potri.013G113700' => 'ptr', 'Potri.018G107800' => 'ptr', 'Potri.019G084100' => 'ptr', 'Pp3c14_23720' => 'ppa', 'Pp3c16_6340' => 'ppa', 'Pp3c23_13420' => 'ppa', 'Pp3c24_2740' => 'ppa', 'Pp3c25_860' => 'ppa', 'Pp3c8_21750' => 'ppa', 'Prupe.1G273000' => 'ppe', 'Prupe.1G273700' => 'ppe', 'Prupe.1G274100' => 'ppe', 'Prupe.2G023300' => 'ppe', 'Prupe.4G048000' => 'ppe', 'Prupe.4G080400' => 'ppe', 'Prupe.4G181200' => 'ppe', 'Prupe.8G056900' => 'ppe', 'Prupe.8G168700' => 'ppe', 'Psat1g189080' => 'psa', 'Psat1g204760' => 'psa', 'Psat4g175560' => 'psa', 'Psat4g177720' => 'psa', 'Psat5g244240' => 'psa', 'Psat6g010720' => 'psa', 'Psat6g187200' => 'psa', 'Psat7g072040' => 'psa', 'PSO017G3501' => 'pso', 'PSO063G2148' => 'pso', 'PSO063G5608' => 'pso', 'PSO210G6392' => 'pso', 'PSO541G2319' => 'pso', 'PSO541G2836' => 'pso', 'PSO541G4012' => 'pso', 'PSO541G6253' => 'pso', 'PSO675G0580' => 'pso', 'PSO675G0856' => 'pso', 'PSO675G5635' => 'pso', 'PSO675G9157' => 'pso', 'PSO832G1660' => 'pso', 'PSO832G1969' => 'pso', 'QL02p007186' => 'qlo', 'QL02p033904' => 'qlo', 'QL03p064391' => 'qlo', 'QL05p040593' => 'qlo', 'QL05p058242' => 'qlo', 'QL08p021825' => 'qlo', 'QL11p004981' => 'qlo', 'RcHm_v2.0_Chr1g0318301' => 'rch', 'RcHm_v2.0_Chr4g0418501' => 'rch', 'RcHm_v2.0_Chr4g0439971' => 'rch', 'RcHm_v2.0_Chr5g0008541' => 'rch', 'RcHm_v2.0_Chr5g0014101' => 'rch', 'RcHm_v2.0_Chr5g0014131' => 'rch', 'RcHm_v2.0_Chr5g0033621' => 'rch', 'RcHm_v2.0_Chr6g0272041' => 'rch', 'RcHm_v2.0_Chr6g0278831' => 'rch', 'Rhsim02G0130400' => 'rsi', 'Rhsim02G0171100' => 'rsi', 'Rhsim05G0053000' => 'rsi', 'Rhsim05G0053100' => 'rsi', 'Rhsim06G0096500' => 'rsi', 'Rhsim06G0096600' => 'rsi', 'Rhsim06G0199100' => 'rsi', 'Rhsim12G0062300' => 'rsi', 'Rhsim12G0062800' => 'rsi', 'Sabra02G0118600' => 'sbr', 'Sabra04G0027300' => 'sbr', 'Sabra04G0119500' => 'sbr', 'Sabra08G0112500' => 'sbr', 'Sabra11G0036800' => 'sbr', 'Sabra11G0103800' => 'sbr', 'Sabra13G0096300' => 'sbr', 'Sabra16G0262300' => 'sbr', 'Sabra18G0091700' => 'sbr', 'Sabra19G0095400' => 'sbr', 'SalBow6G3080' => 'sbo', 'SalBow7G1157' => 'sbo', 'SalBow7G2123' => 'sbo', 'SalBow7G2285' => 'sbo', 'SalBow7G3537' => 'sbo', 'SalBow8G2947' => 'sbo', 'SalBow8G4463' => 'sbo', 'SalBow8G5466' => 'sbo', 'Sc01g0001750' => 'sci', 'Sc02g0006640' => 'sci', 'Sc02g0006670' => 'sci', 'Sc04g0008220' => 'sci', 'Sc05g0006190' => 'sci', 'Sc08g0002760' => 'sci', 'Sc17g0006170' => 'sci', 'Sc22g0002050' => 'sci', 'Sc23g0001190' => 'sci', 'Sc24g0000980' => 'sci', 'Sed0006245' => 'sed', 'Sed0007543' => 'sed', 'Sed0009411' => 'sed', 'Sed0010765' => 'sed', 'Sed0012944' => 'sed', 'Sed0014682' => 'sed', 'Sed0016174' => 'sed', 'Sed0016796' => 'sed', 'Sed0020317' => 'sed', 'Sed0021467' => 'sed', 'SEGI_01316' => 'sgi', 'SEGI_03374' => 'sgi', 'SEGI_16265' => 'sgi', 'SEGI_18569' => 'sgi', 'SEGI_20351' => 'sgi', 'SEGI_26395' => 'sgi', 'SEGI_29469' => 'sgi', 'SEGI_34771' => 'sgi', 'SEGI_36769' => 'sgi', 'SEGI_37139' => 'sgi', 'SGA_v2.0_scaffold100G29687' => 'sas', 'SGA_v2.0_scaffold118G32472' => 'sas', 'SGA_v2.0_scaffold14G07051' => 'sas', 'SGA_v2.0_scaffold183G39845' => 'sas', 'SGA_v2.0_scaffold1G00174' => 'sas', 'SGA_v2.0_scaffold22G09714' => 'sas', 'SGA_v2.0_scaffold333G48992' => 'sas', 'SGA_v2.0_scaffold46G17491' => 'sas', 'SGA_v2.0_scaffold49G18294' => 'sas', 'SGA_v2.0_scaffold63G21658' => 'sas', 'SHI01741' => 'shi', 'SHI05771' => 'shi', 'SHI18077' => 'shi', 'SHI20525' => 'shi', 'SHI20527' => 'shi', 'SHI20528' => 'shi', 'SMO172G0185' => 'smo', 'SMO198G0020' => 'smo', 'SMO351G0006' => 'smo', 'SMO356G0118' => 'smo', 'SMO358G0296' => 'smo', 'SMO367G0079' => 'smo', 'SMO367G1277' => 'smo', 'Solyc01g014220.3' => 'sly', 'Solyc01g111770.2' => 'sly', 'Solyc02g078180.3' => 'sly', 'Solyc03g006430.3' => 'sly', 'Solyc03g006456.1' => 'sly', 'Solyc03g079860.2' => 'sly', 'Solyc04g079770.3' => 'sly', 'Solyc05g007430.4' => 'sly', 'Solyc07g063150.3' => 'sly', 'Solyc08g016620.3' => 'sly', 'Solyc09g057590.3' => 'sly', 'Solyc09g057600.1' => 'sly', 'Solyc10g009050.3' => 'sly', 'Solyc11g017420.2' => 'sly', 'Sopen01g053810' => 'spe', 'Sopen02g023040' => 'spe', 'Sopen03g002440' => 'spe', 'Sopen04g033350' => 'spe', 'Sopen05g003310' => 'spe', 'Sopen07g004050' => 'spe', 'Sopen07g031340' => 'spe', 'Sopen08g006990' => 'spe', 'Sopen10g004830' => 'spe', 'Sopen11g009370' => 'spe', 'Sp1g24450' => 'spa', 'Sp1g29670' => 'spa', 'Sp1g39600' => 'spa', 'Sp2g11080' => 'spa', 'Sp2g13970' => 'spa', 'Sp4g16130' => 'spa', 'Sp6g13080' => 'spa', 'Sp7g37270' => 'spa', 'TAR371G0065' => 'tar', 'TAR376G0340' => 'tar', 'TAR376G0435' => 'tar', 'TAR381G0002' => 'tar', 'TAR381G1236' => 'tar', 'TAR624G0055' => 'tar', 'TAR624G0324' => 'tar', 'TAR624G0696' => 'tar', 'TAR624G0906' => 'tar', 'TAR625G0107' => 'tar', 'TAR626G0015' => 'tar', 'TAR626G1356' => 'tar', 'TAR627G0888' => 'tar', 'TAR628G0399' => 'tar', 'TAR628G1327' => 'tar', 'TAR629G2831' => 'tar', 'TAR629G2874' => 'tar', 'TAR633G1432' => 'tar', 'TAR633G2771' => 'tar', 'THA.LOC104803394' => 'tha', 'THA.LOC104805153' => 'tha', 'THA.LOC104806784' => 'tha', 'THA.LOC104810473' => 'tha', 'THA.LOC104813100' => 'tha', 'THA.LOC104814215' => 'tha', 'THA.LOC104815554' => 'tha', 'THA.LOC104820544' => 'tha', 'THA.LOC104824754' => 'tha', 'THA.LOC104827717' => 'tha', 'Thecc.02G031400' => 'tca', 'Thecc.02G055900' => 'tca', 'Thecc.02G350800' => 'tca', 'Thecc.06G150900' => 'tca', 'Thecc.06G186600' => 'tca', 'Thecc.07G089600' => 'tca', 'Thecc.08G020400' => 'tca', 'Thecc.08G182100' => 'tca', 'Thhalv10000873m.g' => 'esa', 'Thhalv10004185m.g' => 'esa', 'Thhalv10006981m.g' => 'esa', 'Thhalv10007204m.g' => 'esa', 'Thhalv10011374m.g' => 'esa', 'Thhalv10013482m.g' => 'esa', 'Thhalv10017801m.g' => 'esa', 'Thhalv10024983m.g' => 'esa', 'TPR.G12072' => 'tpr', 'TPR.G15769' => 'tpr', 'TPR.G16504' => 'tpr', 'TPR.G16506' => 'tpr', 'TPR.G24345' => 'tpr', 'TPR.G26666' => 'tpr', 'TPR.G27320' => 'tpr', 'TPR.G31819' => 'tpr', 'TPR.G38879' => 'tpr', 'TPR.G39015' => 'tpr', 'TPR.G8819' => 'tpr', 'TWI09G0924' => 'twi', 'TWI12G0811' => 'twi', 'TWI12G1294' => 'twi', 'TWI31G0150' => 'twi', 'TWI36G1262' => 'twi', 'TWI38G1287' => 'twi', 'TWI38G1633' => 'twi', 'TWI38G1982' => 'twi', 'TWI39G0116' => 'twi', 'TWI60G1011' => 'twi', 'TWI63G0171' => 'twi', 'TWI73G0839' => 'twi', 'TWI79G1511' => 'twi', 'unitig_0.g915' => 'ugi', 'unitig_0.g916' => 'ugi', 'unitig_21.g20219' => 'ugi', 'unitig_21.g20416' => 'ugi', 'unitig_578.g16132' => 'ugi', 'unitig_578.g16718' => 'ugi', 'unitig_62.g23481' => 'ugi', 'unitig_744.g24535' => 'ugi', 'unitig_749.g13525' => 'ugi', 'vmacro01248' => 'vma', 'vmacro02290' => 'vma', 'vmacro10946' => 'vma', 'vmacro11865' => 'vma', 'vmacro12493' => 'vma', 'vmacro17322' => 'vma', 'vmacro21599' => 'vma', 'vmacro23041' => 'vma', 'VMungo0251G0004' => 'vmu', 'VMungo0251G2639' => 'vmu', 'VMungo0251G2967' => 'vmu', 'VMungo0540G0864' => 'vmu', 'VMungo0540G1569' => 'vmu', 'VMungo0647G0317' => 'vmu', 'VMungo0720G1373' => 'vmu', 'VMungo0720G1508' => 'vmu', 'VMungo1080G0485' => 'vmu', 'VMungo1215G3177' => 'vmu', 'Zm00001eb112600' => 'zma', 'Zm00001eb120220' => 'zma', 'Zm00001eb153240' => 'zma', 'Zm00001eb168880' => 'zma', 'Zm00001eb213920' => 'zma', 'Zm00001eb228280' => 'zma', 'Zm00001eb254580' => 'zma', 'Zm00001eb272180' => 'zma', 'Zm00001eb293190' => 'zma', 'Zm00001eb322930' => 'zma', 'Zm00001eb353360' => 'zma', 'Zm00001eb353390' => 'zma', 'Zm00001eb353430' => 'zma', 'Zm00001eb353440' => 'zma', 'Zm00001eb353780' => 'zma' ), 'gf_id' => 'HOM05D000499', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000499' ), 'data_identifier' => 'HOM05D000499', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000499', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1066', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p29780' => 'bna', 'A02p33180' => 'bna', 'A03p16470' => 'bna', 'A03p66010' => 'bna', 'A04p25970' => 'bna', 'A06p01270' => 'bna', 'A06p46080' => 'bna', 'A07p11400' => 'bna', 'A08p01840' => 'bna', 'A08p08230' => 'bna', 'A08p25740' => 'bna', 'A09p32070' => 'bna', 'A09p37830' => 'bna', 'A09p42840' => 'bna', 'A09p42850' => 'bna', 'Aa31LG10G2060' => 'aar', 'Aa31LG2G7410' => 'aar', 'Aa31LG6G10200' => 'aar', 'Aa31LG6G16680' => 'aar', 'Aa31LG6G8470' => 'aar', 'Aa31LG9G12730' => 'aar', 'Aa31LG9G13680' => 'aar', 'Aa31LG9G14920' => 'aar', 'Aa31LG9G6650' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4977' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5467' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3254' => 'aag', 'Actinidia02578' => 'ach', 'Actinidia07693' => 'ach', 'Actinidia08413' => 'ach', 'Actinidia08414' => 'ach', 'Actinidia15289' => 'ach', 'Actinidia19871' => 'ach', 'Actinidia21475' => 'ach', 'Actinidia22576' => 'ach', 'Actinidia28327' => 'ach', 'Actinidia32491' => 'ach', 'Actinidia39463' => 'ach', 'Actinidia39571' => 'ach', 'Ah.01g013750' => 'amhyb', 'Ah.01g023210' => 'amhyb', 'Ah.04g164850' => 'amhyb', 'Ah.05g178060' => 'amhyb', 'Ah.07g204270' => 'amhyb', 'Ah.07g208480' => 'amhyb', 'Ah.09g237410' => 'amhyb', 'Ah.14g089460' => 'amhyb', 'AL1G41790' => 'aly', 'AL1G49050' => 'aly', 'AL1G53810' => 'aly', 'AL1G61400' => 'aly', 'AL4G18580' => 'aly', 'AL5G12510' => 'aly', 'AL5G12540' => 'aly', 'AL6G43230' => 'aly', 'AL7G10370' => 'aly', 'AL7G19250' => 'aly', 'AL8G12240' => 'aly', 'AL8G18540' => 'aly', 'Aqoxy1G02409' => 'aox', 'Aqoxy2G03993' => 'aox', 'Aqoxy3G03357' => 'aox', 'Aqoxy4G00785' => 'aox', 'Aqoxy5G02598' => 'aox', 'Aqoxy6G00132' => 'aox', 'Aqoxy7G01776' => 'aox', 'Aqoxy7G02316' => 'aox', 'Aqoxy7G03973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.12AFKW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B8730' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27IQR1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3F75VG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3RE0GA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41TCQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.527VTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FIR39' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5W8UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DA38EV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ63HS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H1I32C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HC27T5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4M8AP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7N3CZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9UVDZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LS1NQA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT1D4B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SKC4TM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCFV76' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF9Q1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQWD9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1ZM88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WE07RT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YCK7VH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJE6Q6' => 'arhy', 'AT1G28240' => 'ath', 'AT1G34550' => 'ath', 'AT1G53040' => 'ath', 'AT2G02910' => 'ath', 'AT4G09630' => 'ath', 'AT4G38500' => 'ath', 'AT5G42660' => 'ath', 'AT5G46220' => 'ath', 'ATR0152G026' => 'atr', 'ATR0564G343' => 'atr', 'ATR0706G151' => 'atr', 'ATR0733G207' => 'atr', 'ATR0751G234' => 'atr', 'ATR0807G048' => 'atr', 'ATR1091G084' => 'atr', 'Atru.chr10.1229' => 'acertr', 'Atru.chr10.1230' => 'acertr', 'Atru.chr10.1874' => 'acertr', 'Atru.chr11.1808' => 'acertr', 'Atru.chr13.1795' => 'acertr', 'Atru.chr13.570' => 'acertr', 'Atru.chr2.2608' => 'acertr', 'Atru.chr2.2609' => 'acertr', 'Atru.chr5.3428' => 'acertr', 'Atru.chr8.1171' => 'acertr', 'AUR62004651' => 'cqu', 'AUR62008675' => 'cqu', 'AUR62010014' => 'cqu', 'AUR62013004' => 'cqu', 'AUR62014825' => 'cqu', 'AUR62015015' => 'cqu', 'AUR62015151' => 'cqu', 'AUR62017020' => 'cqu', 'AUR62019422' => 'cqu', 'AUR62023570' => 'cqu', 'AUR62025571' => 'cqu', 'AUR62029098' => 'cqu', 'AUR62033863' => 'cqu', 'AUR62034296' => 'cqu', 'AUR62040075' => 'cqu', 'BcaB02g07334' => 'bca', 'BcaB02g10575' => 'bca', 'BcaB03g12119' => 'bca', 'BcaB03g12120' => 'bca', 'BcaB03g13945' => 'bca', 'BcaB04g17123' => 'bca', 'BcaB04g17867' => 'bca', 'BcaB04g19839' => 'bca', 'BcaB07g30317' => 'bca', 'BcaB07g32432' => 'bca', 'BcaB07g33362' => 'bca', 'BcaB08g36611' => 'bca', 'BcaC01g00028' => 'bca', 'BcaC01g01356' => 'bca', 'BcaC01g02034' => 'bca', 'BcaC01g06051' => 'bca', 'BcaC03g16839' => 'bca', 'BcaC03g17176' => 'bca', 'BcaC05g26829' => 'bca', 'BcaC06g31490' => 'bca', 'BcaC06g35344' => 'bca', 'BcaC06g36570' => 'bca', 'BcaC07g37537' => 'bca', 'BcaC08g43491' => 'bca', 'BcaC08g43773' => 'bca', 'BcaNung00234' => 'bca', 'BcaNung01982' => 'bca', 'BcaNung03707' => 'bca', 'BcaNung06454' => 'bca', 'BolC2t10762H' => 'bol', 'BolC2t11191H' => 'bol', 'BolC3t14322H' => 'bol', 'BolC3t19747H' => 'bol', 'BolC3t21425H' => 'bol', 'BolC4t27800H' => 'bol', 'BolC5t31423H' => 'bol', 'BolC6t35951H' => 'bol', 'BolC6t36282H' => 'bol', 'BolC7t40678H' => 'bol', 'BolC7t40679H' => 'bol', 'BolC7t42222H' => 'bol', 'BolC7t43492H' => 'bol', 'BolC7t46785H' => 'bol', 'BolC8t47853H' => 'bol', 'BolC9t56805H' => 'bol', 'BraA02t08000Z' => 'bra', 'BraA02t08341Z' => 'bra', 'BraA03t10936Z' => 'bra', 'BraA03t15657Z' => 'bra', 'BraA04t18100Z' => 'bra', 'BraA05t20523Z' => 'bra', 'BraA06t23353Z' => 'bra', 'BraA06t27473Z' => 'bra', 'BraA06t27769Z' => 'bra', 'BraA07t28928Z' => 'bra', 'BraA08t32236Z' => 'bra', 'BraA08t32841Z' => 'bra', 'BraA08t34524Z' => 'bra', 'BraA09t38742Z' => 'bra', 'BraA09t39295Z' => 'bra', 'C02p47180' => 'bna', 'C02p50990' => 'bna', 'C03p19360' => 'bna', 'C03p74950' => 'bna', 'C03p91000' => 'bna', 'C04p63260' => 'bna', 'C05p27050' => 'bna', 'C06p08750' => 'bna', 'C06p11490' => 'bna', 'C07p02820' => 'bna', 'C07p17180' => 'bna', 'C07p29440' => 'bna', 'C07p63730' => 'bna', 'C09p39260' => 'bna', 'CAN.G1164.34' => 'can', 'CAN.G1164.39' => 'can', 'CAN.G1530.3' => 'can', 'CAN.G162.61' => 'can', 'CAN.G176.6' => 'can', 'CAN.G289.49' => 'can', 'CAN.G370.21' => 'can', 'CAN.G370.22' => 'can', 'CAN.G371.117' => 'can', 'CAN.G58.37' => 'can', 'CAN.G588.98' => 'can', 'CANSAT21G2266' => 'cansat', 'CANSAT25G2799' => 'cansat', 'CANSAT35G0862' => 'cansat', 'CANSAT35G1704' => 'cansat', 'CANSAT35G1760' => 'cansat', 'CANSAT56G3971' => 'cansat', 'CANSAT56G4116' => 'cansat', 'CANSAT80G1259' => 'cansat', 'CARHR027730' => 'chi', 'CARHR033880' => 'chi', 'CARHR043270' => 'chi', 'CARHR145330' => 'chi', 'CARHR145340' => 'chi', 'CARHR175570' => 'chi', 'CARHR181570' => 'chi', 'CARHR258470' => 'chi', 'CARHR260490' => 'chi', 'CARHR294220' => 'chi', 'Carub.0001s2668' => 'cru', 'Carub.0001s3257' => 'cru', 'Carub.0001s4220' => 'cru', 'Carub.0005s0179' => 'cru', 'Carub.0006s2807' => 'cru', 'Carub.0007s0039' => 'cru', 'Carub.0008s0169' => 'cru', 'Carub.0008s0636' => 'cru', 'Ca_00338_v3' => 'car', 'Ca_00542_v3' => 'car', 'Ca_01844_v3' => 'car', 'Ca_10611_v3' => 'car', 'Ca_13326_v3' => 'car', 'Ca_17944_v3' => 'car', 'Ca_18546_v3' => 'car', 'Ca_24219_v3' => 'car', 'Ca_29972_v3' => 'car', 'CBR_g3681' => 'cbr', 'CBR_g40021' => 'cbr', 'Cc01_g08140' => 'ccan', 'Cc02_g13410' => 'ccan', 'Cc02_g37480' => 'ccan', 'Cc05_g12030' => 'ccan', 'Cc09_g03370' => 'ccan', 'Cc09_g10300' => 'ccan', 'Cc10_g03530' => 'ccan', 'Cc10_g11380' => 'ccan', 'CDE01G0176' => 'cde', 'CDE02G0675' => 'cde', 'CDE02G0942' => 'cde', 'CDE02G1153' => 'cde', 'CDE02G4177' => 'cde', 'CDE04G2117' => 'cde', 'CDE04G2736' => 'cde', 'CDE08G1161' => 'cde', 'CDE09G1238' => 'cde', 'Cfa000467' => 'cfa', 'Cfa000947' => 'cfa', 'Cfa004969' => 'cfa', 'Cfa005284' => 'cfa', 'Cfa008993' => 'cfa', 'Cfa018187' => 'cfa', 'Cfa018454' => 'cfa', 'Cfa020585' => 'cfa', 'Ciclev10000424m.g' => 'ccl', 'Ciclev10003605m.g' => 'ccl', 'Ciclev10007828m.g' => 'ccl', 'Ciclev10014620m.g' => 'ccl', 'Ciclev10015169m.g' => 'ccl', 'Ciclev10018291m.g' => 'ccl', 'Ciclev10028256m.g' => 'ccl', 'Ciclev10033822m.g' => 'ccl', 'CiPaw.05G060300' => 'cil', 'CiPaw.05G085000' => 'cil', 'CiPaw.06G083700' => 'cil', 'CiPaw.06G120300' => 'cil', 'CiPaw.09G060500' => 'cil', 'CiPaw.09G123800' => 'cil', 'CiPaw.11G169700' => 'cil', 'CiPaw.12G118300' => 'cil', 'CiPaw.15G071000' => 'cil', 'CiPaw.15G081900' => 'cil', 'ClCG01G024610' => 'cla', 'ClCG03G006070' => 'cla', 'ClCG05G019250' => 'cla', 'ClCG09G009500' => 'cla', 'ClCG11G008200' => 'cla', 'ClCG11G018080' => 'cla', 'COL.COLO4_17373' => 'col', 'COL.COLO4_22994' => 'col', 'COL.COLO4_26389' => 'col', 'COL.COLO4_27170' => 'col', 'COL.COLO4_31074' => 'col', 'COL.COLO4_31465' => 'col', 'COL.COLO4_36438' => 'col', 'COL.COLO4_36439' => 'col', 'Cpa.g.c38781' => 'cpa', 'Cpa.g.sc128.12' => 'cpa', 'Cpa.g.sc166.7' => 'cpa', 'Cpa.g.sc166.8' => 'cpa', 'Cpa.g.sc20.111' => 'cpa', 'Cpa.g.sc27.31' => 'cpa', 'Cpa.g.sc64.36' => 'cpa', 'Cpa.g.sc64.37' => 'cpa', 'Cpa.g.sc66.49' => 'cpa', 'Cpa.g.sc80.64' => 'cpa', 'CsaV3_1G012320' => 'csa', 'CsaV3_2G008480' => 'csa', 'CsaV3_2G033450' => 'csa', 'CsaV3_3G044830' => 'csa', 'CsaV3_4G033710' => 'csa', 'CsaV3_6G051730' => 'csa', 'CsaV3_7G025350' => 'csa', 'CSS0001067' => 'camsi', 'CSS0005996' => 'camsi', 'CSS0006590' => 'camsi', 'CSS0009673' => 'camsi', 'CSS0010201' => 'camsi', 'CSS0010549' => 'camsi', 'CSS0011364' => 'camsi', 'CSS0014473' => 'camsi', 'CSS0014961' => 'camsi', 'CSS0020191' => 'camsi', 'CSS0021165' => 'camsi', 'CSS0022306' => 'camsi', 'CSS0030591' => 'camsi', 'CSS0030696' => 'camsi', 'CSS0032653' => 'camsi', 'CSS0037487' => 'camsi', 'CSS0041102' => 'camsi', 'CSS0041261' => 'camsi', 'CSS0046246' => 'camsi', 'CSS0049256' => 'camsi', 'DCAR_004075' => 'dca', 'DCAR_011538' => 'dca', 'DCAR_019553' => 'dca', 'DCAR_020952' => 'dca', 'DCAR_021739' => 'dca', 'DCAR_027407' => 'dca', 'DCAR_027913' => 'dca', 'DCAR_028066' => 'dca', 'Dinv05899' => 'din', 'Dinv07563' => 'din', 'Dinv08010' => 'din', 'Dinv14125' => 'din', 'Dinv20172' => 'din', 'Dinv30743' => 'din', 'Dinv31229' => 'din', 'Dinv34162' => 'din', 'Dinv36028' => 'din', 'Dinv39368' => 'din', 'Dinv40565' => 'din', 'Dinv41706' => 'din', 'Duzib052G0089' => 'dzi', 'Duzib116G0641' => 'dzi', 'Duzib132G0069' => 'dzi', 'Duzib132G1219' => 'dzi', 'Duzib147G0278' => 'dzi', 'Duzib160G0480' => 'dzi', 'Duzib170G0661' => 'dzi', 'Duzib177G0591' => 'dzi', 'Duzib187G1353' => 'dzi', 'Duzib192G0858' => 'dzi', 'Duzib192G0883' => 'dzi', 'Duzib213G0506' => 'dzi', 'Duzib235G0289' => 'dzi', 'Duzib251G0422' => 'dzi', 'ECA232G3898' => 'eca', 'ECA233G5950' => 'eca', 'ECA234G1699' => 'eca', 'ECA234G2421' => 'eca', 'ECA236G0426' => 'eca', 'ECA236G4331' => 'eca', 'ECA248G2573' => 'eca', 'EL10Ac1g00077' => 'bvu', 'EL10Ac1g01746' => 'bvu', 'EL10Ac2g03464' => 'bvu', 'EL10Ac4g08176' => 'bvu', 'EL10Ac7g17521' => 'bvu', 'EL10Ac8g20386' => 'bvu', 'EL10Ac9g21343' => 'bvu', 'EL10Ac9g22688' => 'bvu', 'Eucgr.B03434' => 'egr', 'Eucgr.D00618' => 'egr', 'Eucgr.E02395' => 'egr', 'Eucgr.F01129' => 'egr', 'Eucgr.F02622' => 'egr', 'Eucgr.F04207' => 'egr', 'FAN01G0570' => 'fan', 'FAN03G3351' => 'fan', 'FAN06G3702' => 'fan', 'FAN07G2149' => 'fan', 'FAN10G3758' => 'fan', 'FAN11G1170' => 'fan', 'FAN11G2050' => 'fan', 'FAN11G2724' => 'fan', 'FAN12G1700' => 'fan', 'FAN12G2028' => 'fan', 'FAN15G1160' => 'fan', 'FAN15G3063' => 'fan', 'FAN16G2540' => 'fan', 'FAN16G3077' => 'fan', 'FAN16G3624' => 'fan', 'FAN17G0221' => 'fan', 'FAN20G2492' => 'fan', 'FAN20G2905' => 'fan', 'FAN21G0548' => 'fan', 'FAN21G1300' => 'fan', 'FAN22G0077' => 'fan', 'FAN22G1315' => 'fan', 'FAN24G1280' => 'fan', 'FAN24G1445' => 'fan', 'FAN24G3527' => 'fan', 'FAN25G0464' => 'fan', 'FAN25G2885' => 'fan', 'FAN25G3270' => 'fan', 'FAN27G1101' => 'fan', 'FAN27G2846' => 'fan', 'FAN27G3524' => 'fan', 'FvH4_2g11770' => 'fve', 'FvH4_2g15630' => 'fve', 'FvH4_3g05570' => 'fve', 'FvH4_3g09110' => 'fve', 'FvH4_3g19940' => 'fve', 'FvH4_4g04821' => 'fve', 'FvH4_4g31480' => 'fve', 'FvH4_7g01740' => 'fve', 'Glyma.05G130400' => 'gma', 'Glyma.05G156400' => 'gma', 'Glyma.07G197000' => 'gma', 'Glyma.08G085151' => 'gma', 'Glyma.08G114500' => 'gma', 'Glyma.08G300400' => 'gma', 'Glyma.10G215800' => 'gma', 'Glyma.12G224400' => 'gma', 'Glyma.13G179300' => 'gma', 'Glyma.13G218151' => 'gma', 'Glyma.13G238800' => 'gma', 'Glyma.13G276900' => 'gma', 'Glyma.14G078200' => 'gma', 'Glyma.15G074500' => 'gma', 'Glyma.15G094100' => 'gma', 'Glyma.17G247200' => 'gma', 'Glyma.18G120100' => 'gma', 'Glyma.20G176000' => 'gma', 'Gohir.A01G063600' => 'ghi', 'Gohir.A01G170301' => 'ghi', 'Gohir.A02G060500' => 'ghi', 'Gohir.A05G133850' => 'ghi', 'Gohir.A05G161400' => 'ghi', 'Gohir.A06G012900' => 'ghi', 'Gohir.A06G035901' => 'ghi', 'Gohir.A06G127100' => 'ghi', 'Gohir.A06G210500' => 'ghi', 'Gohir.A08G008650' => 'ghi', 'Gohir.A09G072700' => 'ghi', 'Gohir.A09G088301' => 'ghi', 'Gohir.A10G040600' => 'ghi', 'Gohir.A12G036300' => 'ghi', 'Gohir.A12G143350' => 'ghi', 'Gohir.A12G165500' => 'ghi', 'Gohir.A13G145700' => 'ghi', 'Gohir.D01G050000' => 'ghi', 'Gohir.D01G051366' => 'ghi', 'Gohir.D01G161350' => 'ghi', 'Gohir.D02G065900' => 'ghi', 'Gohir.D05G164200' => 'ghi', 'Gohir.D05G355500' => 'ghi', 'Gohir.D06G010400' => 'ghi', 'Gohir.D06G111250' => 'ghi', 'Gohir.D06G132000' => 'ghi', 'Gohir.D06G210500' => 'ghi', 'Gohir.D07G165675' => 'ghi', 'Gohir.D08G062240' => 'ghi', 'Gohir.D08G086101' => 'ghi', 'Gohir.D08G138060' => 'ghi', 'Gohir.D09G072300' => 'ghi', 'Gohir.D10G041400' => 'ghi', 'Gohir.D11G191020' => 'ghi', 'Gohir.D11G212066' => 'ghi', 'Gohir.D12G036300' => 'ghi', 'Gohir.D12G168600' => 'ghi', 'Gohir.D13G150600' => 'ghi', 'Gorai.001G057300' => 'gra', 'Gorai.002G069900' => 'gra', 'Gorai.002G200000' => 'gra', 'Gorai.003G067600' => 'gra', 'Gorai.005G074800' => 'gra', 'Gorai.006G087300' => 'gra', 'Gorai.008G037500' => 'gra', 'Gorai.008G181400' => 'gra', 'Gorai.009G169400' => 'gra', 'Gorai.009G387900' => 'gra', 'Gorai.010G013300' => 'gra', 'Gorai.010G153800' => 'gra', 'Gorai.010G255800' => 'gra', 'Gorai.011G043700' => 'gra', 'Gorai.011G198900' => 'gra', 'Gorai.013G168400' => 'gra', 'GSVIVG01005212001' => 'vvi', 'GSVIVG01006163001' => 'vvi', 'GSVIVG01009625001' => 'vvi', 'GSVIVG01014338001' => 'vvi', 'GSVIVG01020005001' => 'vvi', 'GSVIVG01021450001' => 'vvi', 'GSVIVG01023975001' => 'vvi', 'GSVIVG01034490001' => 'vvi', 'HanXRQChr04g0112071' => 'han', 'HanXRQChr05g0131151' => 'han', 'HanXRQChr09g0262371' => 'han', 'HanXRQChr09g0268401' => 'han', 'HanXRQChr10g0279241' => 'han', 'HanXRQChr10g0297961' => 'han', 'HanXRQChr11g0326231' => 'han', 'HanXRQChr11g0328471' => 'han', 'HanXRQChr16g0507941' => 'han', 'HanXRQChr17g0560211' => 'han', 'Haze_02108' => 'cav', 'Haze_02428' => 'cav', 'Haze_05593' => 'cav', 'Haze_06448' => 'cav', 'Haze_09427' => 'cav', 'Haze_12022' => 'cav', 'Haze_17612' => 'cav', 'Haze_17928' => 'cav', 'Hma1.2p1_0032F.1_g019250' => 'hma', 'Hma1.2p1_0163F.1_g072690' => 'hma', 'Hma1.2p1_0265F.1_g106710' => 'hma', 'Hma1.2p1_0286F.1_g113970' => 'hma', 'Hma1.2p1_0363F.1_g136640' => 'hma', 'Hma1.2p1_0584F.1_g183470' => 'hma', 'Hma1.2p1_0885F.1_g232570' => 'hma', 'HPP92_006022' => 'vpl', 'HPP92_007320' => 'vpl', 'HPP92_011521' => 'vpl', 'HPP92_019387' => 'vpl', 'HPP92_024038' => 'vpl', 'Hund05891' => 'sun', 'Hund06450' => 'sun', 'Hund12053' => 'sun', 'Hund16800' => 'sun', 'Hund21222' => 'sun', 'Hund22896' => 'sun', 'Hund23746' => 'sun', 'Hund27083' => 'sun', 'Lalb_Chr02g0141831' => 'lal', 'Lalb_Chr02g0141841' => 'lal', 'Lalb_Chr05g0220411' => 'lal', 'Lalb_Chr06g0162081' => 'lal', 'Lalb_Chr09g0327651' => 'lal', 'Lalb_Chr13g0295051' => 'lal', 'Lalb_Chr15g0086801' => 'lal', 'Lalb_Chr16g0383781' => 'lal', 'Lalb_Chr16g0383791' => 'lal', 'Lalb_Chr18g0055441' => 'lal', 'Lalb_Chr18g0059611' => 'lal', 'Lalb_Chr20g0109661' => 'lal', 'Lalb_Chr20g0109831' => 'lal', 'Lalb_Chr20g0121871' => 'lal', 'Lalb_Chr22g0355361' => 'lal', 'Lalb_Chr25g0286371' => 'lal', 'Lj1A1187G43' => 'lonja', 'Lj1A1205T50' => 'lonja', 'Lj1A800G33' => 'lonja', 'Lj1C1187T7' => 'lonja', 'Lj1C843T11' => 'lonja', 'Lj1g0010940' => 'lja', 'Lj2A288T69' => 'lonja', 'Lj3g0024276' => 'lja', 'Lj4A47T76' => 'lonja', 'Lj4g0005805' => 'lja', 'Lj4g0006097' => 'lja', 'Lj4g0008528' => 'lja', 'Lj4g0024907' => 'lja', 'Lj5g0012472' => 'lja', 'Lj5g0018648' => 'lja', 'Lj6C789G1' => 'lonja', 'Lj6g0004000' => 'lja', 'Lj7A292G67' => 'lonja', 'Lj7A292T64' => 'lonja', 'Lj9A400T58' => 'lonja', 'Lsat_1_v5_gn_1_126181' => 'lsa', 'Lsat_1_v5_gn_4_123041' => 'lsa', 'Lsat_1_v5_gn_4_133620' => 'lsa', 'Lsat_1_v5_gn_4_53221' => 'lsa', 'Lsat_1_v5_gn_4_71961' => 'lsa', 'Lsat_1_v5_gn_7_105241' => 'lsa', 'Lsat_1_v5_gn_7_21361' => 'lsa', 'Lsat_1_v5_gn_7_28860' => 'lsa', 'Lsat_1_v5_gn_7_31260' => 'lsa', 'Lsat_1_v5_gn_8_52801' => 'lsa', 'Manes.02G191400' => 'mes', 'Manes.03G110100' => 'mes', 'Manes.04G071100' => 'mes', 'Manes.05G100500' => 'mes', 'Manes.05G164700' => 'mes', 'Manes.15G087000' => 'mes', 'Manes.15G121500' => 'mes', 'Manes.16G028300' => 'mes', 'Manes.17G046100' => 'mes', 'Manes.17G069800' => 'mes', 'Manes.18G100500' => 'mes', 'Mapoly0002s0109' => 'mpo', 'Mapoly0024s0007' => 'mpo', 'Mapoly0089s0032' => 'mpo', 'MBI04_g42241_MAGBIO' => 'mbi', 'MBI05_g11988_MAGBIO' => 'mbi', 'MBI05_g35452_MAGBIO' => 'mbi', 'MBI07_g30179_MAGBIO' => 'mbi', 'MBI07_g35859_MAGBIO' => 'mbi', 'MBI07_g35860_MAGBIO' => 'mbi', 'MBI07_g37166_MAGBIO' => 'mbi', 'MBI08_g18172_MAGBIO' => 'mbi', 'MBI09_g08441_MAGBIO' => 'mbi', 'MBI13_g01676_MAGBIO' => 'mbi', 'MBI14_g42955_MAGBIO' => 'mbi', 'MBI16_g13161_MAGBIO' => 'mbi', 'MBI17_g27204_MAGBIO' => 'mbi', 'MBI19_g21595_MAGBIO' => 'mbi', 'MD00G1148400' => 'mdo', 'MD02G1301200' => 'mdo', 'MD03G1227800' => 'mdo', 'MD05G1041100' => 'mdo', 'MD05G1124800' => 'mdo', 'MD05G1284000' => 'mdo', 'MD05G1338800' => 'mdo', 'MD05G1338900' => 'mdo', 'MD07G1022800' => 'mdo', 'MD10G1047500' => 'mdo', 'MD10G1127500' => 'mdo', 'MD10G1262300' => 'mdo', 'MD10G1293800' => 'mdo', 'MD16G1074300' => 'mdo', 'Medtr1g021670' => 'mtr', 'Medtr1g096320' => 'mtr', 'Medtr2g013690' => 'mtr', 'Medtr2g019450' => 'mtr', 'Medtr2g085170' => 'mtr', 'Medtr4g088785' => 'mtr', 'Medtr8g055930' => 'mtr', 'Medtr8g085850' => 'mtr', 'MELO3C002605.2' => 'cme', 'MELO3C003891.2' => 'cme', 'MELO3C004012.2' => 'cme', 'MELO3C007134.2' => 'cme', 'MELO3C008118.2' => 'cme', 'MELO3C016700.2' => 'cme', 'MELO3C024127.2' => 'cme', 'MELO3C033361.2' => 'cme', 'MELO3C033362.2' => 'cme', 'Migut.C00430' => 'egut', 'Migut.C01246' => 'egut', 'Migut.E00101' => 'egut', 'Migut.H01486' => 'egut', 'Migut.H01939' => 'egut', 'Migut.K00360' => 'egut', 'Migut.M00910' => 'egut', 'Migut.M01139' => 'egut', 'Migut.N02677' => 'egut', 'MSTRG.13252' => 'ama', 'MSTRG.14701' => 'ama', 'MSTRG.1521' => 'ama', 'MSTRG.15884' => 'ama', 'MSTRG.16242' => 'ama', 'MSTRG.22285' => 'ama', 'MSTRG.22444' => 'ama', 'MSTRG.2349' => 'ama', 'MSTRG.26308' => 'ama', 'MSTRG.28296' => 'ama', 'MSTRG.9895' => 'ama', 'Nitab4.5_0000110g0060' => 'nta', 'Nitab4.5_0000420g0130' => 'nta', 'Nitab4.5_0000422g0030' => 'nta', 'Nitab4.5_0000560g0180' => 'nta', 'Nitab4.5_0000703g0100' => 'nta', 'Nitab4.5_0000786g0200' => 'nta', 'Nitab4.5_0001336g0020' => 'nta', 'Nitab4.5_0001796g0030' => 'nta', 'Nitab4.5_0003348g0060' => 'nta', 'Nitab4.5_0003698g0040' => 'nta', 'Nitab4.5_0003942g0090' => 'nta', 'Nitab4.5_0004775g0070' => 'nta', 'Nitab4.5_0004864g0030' => 'nta', 'Nitab4.5_0005615g0020' => 'nta', 'Nitab4.5_0009288g0030' => 'nta', 'Nitab4.5_0009341g0010' => 'nta', 'Nitab4.5_0009535g0010' => 'nta', 'Nn1g03995' => 'nnu', 'Nn1g04100' => 'nnu', 'Nn1g06530' => 'nnu', 'Nn3g16404' => 'nnu', 'Nn3g17212' => 'nnu', 'Nn3g20776' => 'nnu', 'Nn3g21923' => 'nnu', 'Nn5g27737' => 'nnu', 'Nn5g29461' => 'nnu', 'Nn7g38355' => 'nnu', 'Nn8g39873' => 'nnu', 'Oeu000548.2' => 'oeu', 'Oeu004672.1' => 'oeu', 'Oeu015605.2' => 'oeu', 'Oeu016092.1' => 'oeu', 'Oeu017879.3' => 'oeu', 'Oeu024910.1' => 'oeu', 'Oeu028965.1' => 'oeu', 'Oeu031269.1' => 'oeu', 'Oeu031270.1' => 'oeu', 'Oeu032535.1' => 'oeu', 'Oeu034151.1' => 'oeu', 'Oeu034152.1' => 'oeu', 'Oeu034588.2' => 'oeu', 'Oeu050846.1' => 'oeu', 'Oeu050849.2' => 'oeu', 'Oeu051063.2' => 'oeu', 'Oeu052368.1' => 'oeu', 'Oeu052370.1' => 'oeu', 'Os01g0210400' => 'osa', 'Os01g0304300' => 'osa', 'Os01g0749100' => 'osa', 'Os02g0745800' => 'osa', 'Os03g0769050' => 'osa', 'Os05g0531500' => 'osa', 'Os06g0724300' => 'osa', 'Os11g0198100' => 'osa', 'Peaxi162Scf00069g01425' => 'pax', 'Peaxi162Scf00280g00811' => 'pax', 'Peaxi162Scf00310g00615' => 'pax', 'Peaxi162Scf00362g00542' => 'pax', 'Peaxi162Scf00461g00310' => 'pax', 'Peaxi162Scf00530g00118' => 'pax', 'Peaxi162Scf00541g00057' => 'pax', 'Peaxi162Scf00661g00017' => 'pax', 'Peaxi162Scf00926g00027' => 'pax', 'Peaxi162Scf01064g00263' => 'pax', 'Peaxi162Scf01211g00135' => 'pax', 'PGR004G2336' => 'pgr', 'PGR042G0327' => 'pgr', 'PGR042G1957' => 'pgr', 'PGR042G2003' => 'pgr', 'PGR042G3929' => 'pgr', 'PGR083G1137' => 'pgr', 'PGR083G1364' => 'pgr', 'PGSC0003DMG400003381' => 'stu', 'PGSC0003DMG400003417' => 'stu', 'PGSC0003DMG400008981' => 'stu', 'PGSC0003DMG400012417' => 'stu', 'PGSC0003DMG400012823' => 'stu', 'PGSC0003DMG400016885' => 'stu', 'PGSC0003DMG400022812' => 'stu', 'PGSC0003DMG400029726' => 'stu', 'PGSC0003DMG401009243' => 'stu', 'PGSC0003DMG401031505' => 'stu', 'PGSC0003DMG402031505' => 'stu', 'Phvul.001G017600' => 'pvu', 'Phvul.002G193500' => 'pvu', 'Phvul.002G228900' => 'pvu', 'Phvul.002G236800' => 'pvu', 'Phvul.003G049500' => 'pvu', 'Phvul.005G072000' => 'pvu', 'Phvul.006G164800' => 'pvu', 'Phvul.006G185100' => 'pvu', 'Phvul.007G090000' => 'pvu', 'Potri.001G399800' => 'ptr', 'Potri.002G149900' => 'ptr', 'Potri.004G044100' => 'ptr', 'Potri.004G177600' => 'ptr', 'Potri.009G138000' => 'ptr', 'Potri.010G094000' => 'ptr', 'Potri.011G053000' => 'ptr', 'Potri.011G119300' => 'ptr', 'Potri.013G113700' => 'ptr', 'Potri.018G107800' => 'ptr', 'Potri.019G084100' => 'ptr', 'Pp3c14_23720' => 'ppa', 'Pp3c16_6340' => 'ppa', 'Pp3c23_13420' => 'ppa', 'Pp3c24_2740' => 'ppa', 'Pp3c25_860' => 'ppa', 'Pp3c8_21750' => 'ppa', 'Prupe.1G273000' => 'ppe', 'Prupe.1G273700' => 'ppe', 'Prupe.1G274100' => 'ppe', 'Prupe.2G023300' => 'ppe', 'Prupe.4G048000' => 'ppe', 'Prupe.4G080400' => 'ppe', 'Prupe.4G181200' => 'ppe', 'Prupe.8G056900' => 'ppe', 'Prupe.8G168700' => 'ppe', 'Psat1g189080' => 'psa', 'Psat1g204760' => 'psa', 'Psat4g175560' => 'psa', 'Psat4g177720' => 'psa', 'Psat5g244240' => 'psa', 'Psat6g010720' => 'psa', 'Psat6g187200' => 'psa', 'Psat7g072040' => 'psa', 'PSO017G3501' => 'pso', 'PSO063G2148' => 'pso', 'PSO063G5608' => 'pso', 'PSO210G6392' => 'pso', 'PSO541G2319' => 'pso', 'PSO541G2836' => 'pso', 'PSO541G4012' => 'pso', 'PSO541G6253' => 'pso', 'PSO675G0580' => 'pso', 'PSO675G0856' => 'pso', 'PSO675G5635' => 'pso', 'PSO675G9157' => 'pso', 'PSO832G1660' => 'pso', 'PSO832G1969' => 'pso', 'QL02p007186' => 'qlo', 'QL02p033904' => 'qlo', 'QL03p064391' => 'qlo', 'QL05p040593' => 'qlo', 'QL05p058242' => 'qlo', 'QL08p021825' => 'qlo', 'QL11p004981' => 'qlo', 'RcHm_v2.0_Chr1g0318301' => 'rch', 'RcHm_v2.0_Chr4g0418501' => 'rch', 'RcHm_v2.0_Chr4g0439971' => 'rch', 'RcHm_v2.0_Chr5g0008541' => 'rch', 'RcHm_v2.0_Chr5g0014101' => 'rch', 'RcHm_v2.0_Chr5g0014131' => 'rch', 'RcHm_v2.0_Chr5g0033621' => 'rch', 'RcHm_v2.0_Chr6g0272041' => 'rch', 'RcHm_v2.0_Chr6g0278831' => 'rch', 'Rhsim02G0130400' => 'rsi', 'Rhsim02G0171100' => 'rsi', 'Rhsim05G0053000' => 'rsi', 'Rhsim05G0053100' => 'rsi', 'Rhsim06G0096500' => 'rsi', 'Rhsim06G0096600' => 'rsi', 'Rhsim06G0199100' => 'rsi', 'Rhsim12G0062300' => 'rsi', 'Rhsim12G0062800' => 'rsi', 'Sabra02G0118600' => 'sbr', 'Sabra04G0027300' => 'sbr', 'Sabra04G0119500' => 'sbr', 'Sabra08G0112500' => 'sbr', 'Sabra11G0036800' => 'sbr', 'Sabra11G0103800' => 'sbr', 'Sabra13G0096300' => 'sbr', 'Sabra16G0262300' => 'sbr', 'Sabra18G0091700' => 'sbr', 'Sabra19G0095400' => 'sbr', 'SalBow6G3080' => 'sbo', 'SalBow7G1157' => 'sbo', 'SalBow7G2123' => 'sbo', 'SalBow7G2285' => 'sbo', 'SalBow7G3537' => 'sbo', 'SalBow8G2947' => 'sbo', 'SalBow8G4463' => 'sbo', 'SalBow8G5466' => 'sbo', 'Sc01g0001750' => 'sci', 'Sc02g0006640' => 'sci', 'Sc02g0006670' => 'sci', 'Sc04g0008220' => 'sci', 'Sc05g0006190' => 'sci', 'Sc08g0002760' => 'sci', 'Sc17g0006170' => 'sci', 'Sc22g0002050' => 'sci', 'Sc23g0001190' => 'sci', 'Sc24g0000980' => 'sci', 'Sed0006245' => 'sed', 'Sed0007543' => 'sed', 'Sed0009411' => 'sed', 'Sed0010765' => 'sed', 'Sed0012944' => 'sed', 'Sed0014682' => 'sed', 'Sed0016174' => 'sed', 'Sed0016796' => 'sed', 'Sed0020317' => 'sed', 'Sed0021467' => 'sed', 'SEGI_01316' => 'sgi', 'SEGI_03374' => 'sgi', 'SEGI_16265' => 'sgi', 'SEGI_18569' => 'sgi', 'SEGI_20351' => 'sgi', 'SEGI_26395' => 'sgi', 'SEGI_29469' => 'sgi', 'SEGI_34771' => 'sgi', 'SEGI_36769' => 'sgi', 'SEGI_37139' => 'sgi', 'SGA_v2.0_scaffold100G29687' => 'sas', 'SGA_v2.0_scaffold118G32472' => 'sas', 'SGA_v2.0_scaffold14G07051' => 'sas', 'SGA_v2.0_scaffold183G39845' => 'sas', 'SGA_v2.0_scaffold1G00174' => 'sas', 'SGA_v2.0_scaffold22G09714' => 'sas', 'SGA_v2.0_scaffold333G48992' => 'sas', 'SGA_v2.0_scaffold46G17491' => 'sas', 'SGA_v2.0_scaffold49G18294' => 'sas', 'SGA_v2.0_scaffold63G21658' => 'sas', 'SHI01741' => 'shi', 'SHI05771' => 'shi', 'SHI18077' => 'shi', 'SHI20525' => 'shi', 'SHI20527' => 'shi', 'SHI20528' => 'shi', 'SMO172G0185' => 'smo', 'SMO198G0020' => 'smo', 'SMO351G0006' => 'smo', 'SMO356G0118' => 'smo', 'SMO358G0296' => 'smo', 'SMO367G0079' => 'smo', 'SMO367G1277' => 'smo', 'Solyc01g014220.3' => 'sly', 'Solyc01g111770.2' => 'sly', 'Solyc02g078180.3' => 'sly', 'Solyc03g006430.3' => 'sly', 'Solyc03g006456.1' => 'sly', 'Solyc03g079860.2' => 'sly', 'Solyc04g079770.3' => 'sly', 'Solyc05g007430.4' => 'sly', 'Solyc07g063150.3' => 'sly', 'Solyc08g016620.3' => 'sly', 'Solyc09g057590.3' => 'sly', 'Solyc09g057600.1' => 'sly', 'Solyc10g009050.3' => 'sly', 'Solyc11g017420.2' => 'sly', 'Sopen01g053810' => 'spe', 'Sopen02g023040' => 'spe', 'Sopen03g002440' => 'spe', 'Sopen04g033350' => 'spe', 'Sopen05g003310' => 'spe', 'Sopen07g004050' => 'spe', 'Sopen07g031340' => 'spe', 'Sopen08g006990' => 'spe', 'Sopen10g004830' => 'spe', 'Sopen11g009370' => 'spe', 'Sp1g24450' => 'spa', 'Sp1g29670' => 'spa', 'Sp1g39600' => 'spa', 'Sp2g11080' => 'spa', 'Sp2g13970' => 'spa', 'Sp4g16130' => 'spa', 'Sp6g13080' => 'spa', 'Sp7g37270' => 'spa', 'TAR371G0065' => 'tar', 'TAR376G0340' => 'tar', 'TAR376G0435' => 'tar', 'TAR381G0002' => 'tar', 'TAR381G1236' => 'tar', 'TAR624G0055' => 'tar', 'TAR624G0324' => 'tar', 'TAR624G0696' => 'tar', 'TAR624G0906' => 'tar', 'TAR625G0107' => 'tar', 'TAR626G0015' => 'tar', 'TAR626G1356' => 'tar', 'TAR627G0888' => 'tar', 'TAR628G0399' => 'tar', 'TAR628G1327' => 'tar', 'TAR629G2831' => 'tar', 'TAR629G2874' => 'tar', 'TAR633G1432' => 'tar', 'TAR633G2771' => 'tar', 'THA.LOC104803394' => 'tha', 'THA.LOC104805153' => 'tha', 'THA.LOC104806784' => 'tha', 'THA.LOC104810473' => 'tha', 'THA.LOC104813100' => 'tha', 'THA.LOC104814215' => 'tha', 'THA.LOC104815554' => 'tha', 'THA.LOC104820544' => 'tha', 'THA.LOC104824754' => 'tha', 'THA.LOC104827717' => 'tha', 'Thecc.02G031400' => 'tca', 'Thecc.02G055900' => 'tca', 'Thecc.02G350800' => 'tca', 'Thecc.06G150900' => 'tca', 'Thecc.06G186600' => 'tca', 'Thecc.07G089600' => 'tca', 'Thecc.08G020400' => 'tca', 'Thecc.08G182100' => 'tca', 'Thhalv10000873m.g' => 'esa', 'Thhalv10004185m.g' => 'esa', 'Thhalv10006981m.g' => 'esa', 'Thhalv10007204m.g' => 'esa', 'Thhalv10011374m.g' => 'esa', 'Thhalv10013482m.g' => 'esa', 'Thhalv10017801m.g' => 'esa', 'Thhalv10024983m.g' => 'esa', 'TPR.G12072' => 'tpr', 'TPR.G15769' => 'tpr', 'TPR.G16504' => 'tpr', 'TPR.G16506' => 'tpr', 'TPR.G24345' => 'tpr', 'TPR.G26666' => 'tpr', 'TPR.G27320' => 'tpr', 'TPR.G31819' => 'tpr', 'TPR.G38879' => 'tpr', 'TPR.G39015' => 'tpr', 'TPR.G8819' => 'tpr', 'TWI09G0924' => 'twi', 'TWI12G0811' => 'twi', 'TWI12G1294' => 'twi', 'TWI31G0150' => 'twi', 'TWI36G1262' => 'twi', 'TWI38G1287' => 'twi', 'TWI38G1633' => 'twi', 'TWI38G1982' => 'twi', 'TWI39G0116' => 'twi', 'TWI60G1011' => 'twi', 'TWI63G0171' => 'twi', 'TWI73G0839' => 'twi', 'TWI79G1511' => 'twi', 'unitig_0.g915' => 'ugi', 'unitig_0.g916' => 'ugi', 'unitig_21.g20219' => 'ugi', 'unitig_21.g20416' => 'ugi', 'unitig_578.g16132' => 'ugi', 'unitig_578.g16718' => 'ugi', 'unitig_62.g23481' => 'ugi', 'unitig_744.g24535' => 'ugi', 'unitig_749.g13525' => 'ugi', 'vmacro01248' => 'vma', 'vmacro02290' => 'vma', 'vmacro10946' => 'vma', 'vmacro11865' => 'vma', 'vmacro12493' => 'vma', 'vmacro17322' => 'vma', 'vmacro21599' => 'vma', 'vmacro23041' => 'vma', 'VMungo0251G0004' => 'vmu', 'VMungo0251G2639' => 'vmu', 'VMungo0251G2967' => 'vmu', 'VMungo0540G0864' => 'vmu', 'VMungo0540G1569' => 'vmu', 'VMungo0647G0317' => 'vmu', 'VMungo0720G1373' => 'vmu', 'VMungo0720G1508' => 'vmu', 'VMungo1080G0485' => 'vmu', 'VMungo1215G3177' => 'vmu', 'Zm00001eb112600' => 'zma', 'Zm00001eb120220' => 'zma', 'Zm00001eb153240' => 'zma', 'Zm00001eb168880' => 'zma', 'Zm00001eb213920' => 'zma', 'Zm00001eb228280' => 'zma', 'Zm00001eb254580' => 'zma', 'Zm00001eb272180' => 'zma', 'Zm00001eb293190' => 'zma', 'Zm00001eb322930' => 'zma', 'Zm00001eb353360' => 'zma', 'Zm00001eb353390' => 'zma', 'Zm00001eb353430' => 'zma', 'Zm00001eb353440' => 'zma', 'Zm00001eb353780' => 'zma' ) $gf_id = 'HOM05D000499' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000499' ) $data_identifier = 'HOM05D000499' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 29, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 12, 'amhyb' => (int) 8, 'aly' => (int) 12, 'aox' => (int) 9, 'arhy' => (int) 26, 'ath' => (int) 8, 'atr' => (int) 7, 'acertr' => (int) 10, 'cqu' => (int) 15, 'bca' => (int) 29, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 11, 'cansat' => (int) 8, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 9, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 8, 'cpa' => (int) 10, 'csa' => (int) 7, 'camsi' => (int) 20, 'dca' => (int) 8, 'din' => (int) 12, 'dzi' => (int) 14, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 6, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 38, 'gra' => (int) 16, 'vvi' => (int) 8, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 5, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 11, 'lja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 11, 'mpo' => (int) 3, 'mbi' => (int) 14, 'mdo' => (int) 14, 'mtr' => (int) 8, 'cme' => (int) 9, 'egut' => (int) 9, 'ama' => (int) 11, 'nta' => (int) 17, 'nnu' => (int) 11, 'oeu' => (int) 18, 'osa' => (int) 8, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 6, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 9, 'rsi' => (int) 9, 'sbr' => (int) 10, 'sbo' => (int) 8, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 10, 'sas' => (int) 10, 'shi' => (int) 6, 'smo' => (int) 7, 'sly' => (int) 14, 'spe' => (int) 10, 'spa' => (int) 8, 'tar' => (int) 19, 'tha' => (int) 10, 'tca' => (int) 8, 'esa' => (int) 8, 'tpr' => (int) 11, 'twi' => (int) 13, 'ugi' => (int) 9, 'vma' => (int) 8, 'vmu' => (int) 10, 'zma' => (int) 15 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb353780' $species_info = array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ) $local_species = 'csa' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000499', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1066', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p29780' => 'bna', 'A02p33180' => 'bna', 'A03p16470' => 'bna', 'A03p66010' => 'bna', 'A04p25970' => 'bna', 'A06p01270' => 'bna', 'A06p46080' => 'bna', 'A07p11400' => 'bna', 'A08p01840' => 'bna', 'A08p08230' => 'bna', 'A08p25740' => 'bna', 'A09p32070' => 'bna', 'A09p37830' => 'bna', 'A09p42840' => 'bna', 'A09p42850' => 'bna', 'Aa31LG10G2060' => 'aar', 'Aa31LG2G7410' => 'aar', 'Aa31LG6G10200' => 'aar', 'Aa31LG6G16680' => 'aar', 'Aa31LG6G8470' => 'aar', 'Aa31LG9G12730' => 'aar', 'Aa31LG9G13680' => 'aar', 'Aa31LG9G14920' => 'aar', 'Aa31LG9G6650' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4977' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5467' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3254' => 'aag', 'Actinidia02578' => 'ach', 'Actinidia07693' => 'ach', 'Actinidia08413' => 'ach', 'Actinidia08414' => 'ach', 'Actinidia15289' => 'ach', 'Actinidia19871' => 'ach', 'Actinidia21475' => 'ach', 'Actinidia22576' => 'ach', 'Actinidia28327' => 'ach', 'Actinidia32491' => 'ach', 'Actinidia39463' => 'ach', 'Actinidia39571' => 'ach', 'Ah.01g013750' => 'amhyb', 'Ah.01g023210' => 'amhyb', 'Ah.04g164850' => 'amhyb', 'Ah.05g178060' => 'amhyb', 'Ah.07g204270' => 'amhyb', 'Ah.07g208480' => 'amhyb', 'Ah.09g237410' => 'amhyb', 'Ah.14g089460' => 'amhyb', 'AL1G41790' => 'aly', 'AL1G49050' => 'aly', 'AL1G53810' => 'aly', 'AL1G61400' => 'aly', 'AL4G18580' => 'aly', 'AL5G12510' => 'aly', 'AL5G12540' => 'aly', 'AL6G43230' => 'aly', 'AL7G10370' => 'aly', 'AL7G19250' => 'aly', 'AL8G12240' => 'aly', 'AL8G18540' => 'aly', 'Aqoxy1G02409' => 'aox', 'Aqoxy2G03993' => 'aox', 'Aqoxy3G03357' => 'aox', 'Aqoxy4G00785' => 'aox', 'Aqoxy5G02598' => 'aox', 'Aqoxy6G00132' => 'aox', 'Aqoxy7G01776' => 'aox', 'Aqoxy7G02316' => 'aox', 'Aqoxy7G03973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.12AFKW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B8730' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27IQR1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3F75VG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3RE0GA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41TCQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.527VTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FIR39' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5W8UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DA38EV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ63HS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H1I32C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HC27T5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4M8AP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7N3CZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9UVDZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LS1NQA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT1D4B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SKC4TM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCFV76' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF9Q1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQWD9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1ZM88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WE07RT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YCK7VH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJE6Q6' => 'arhy', 'AT1G28240' => 'ath', 'AT1G34550' => 'ath', 'AT1G53040' => 'ath', 'AT2G02910' => 'ath', 'AT4G09630' => 'ath', 'AT4G38500' => 'ath', 'AT5G42660' => 'ath', 'AT5G46220' => 'ath', 'ATR0152G026' => 'atr', 'ATR0564G343' => 'atr', 'ATR0706G151' => 'atr', 'ATR0733G207' => 'atr', 'ATR0751G234' => 'atr', 'ATR0807G048' => 'atr', 'ATR1091G084' => 'atr', 'Atru.chr10.1229' => 'acertr', 'Atru.chr10.1230' => 'acertr', 'Atru.chr10.1874' => 'acertr', 'Atru.chr11.1808' => 'acertr', 'Atru.chr13.1795' => 'acertr', 'Atru.chr13.570' => 'acertr', 'Atru.chr2.2608' => 'acertr', 'Atru.chr2.2609' => 'acertr', 'Atru.chr5.3428' => 'acertr', 'Atru.chr8.1171' => 'acertr', 'AUR62004651' => 'cqu', 'AUR62008675' => 'cqu', 'AUR62010014' => 'cqu', 'AUR62013004' => 'cqu', 'AUR62014825' => 'cqu', 'AUR62015015' => 'cqu', 'AUR62015151' => 'cqu', 'AUR62017020' => 'cqu', 'AUR62019422' => 'cqu', 'AUR62023570' => 'cqu', 'AUR62025571' => 'cqu', 'AUR62029098' => 'cqu', 'AUR62033863' => 'cqu', 'AUR62034296' => 'cqu', 'AUR62040075' => 'cqu', 'BcaB02g07334' => 'bca', 'BcaB02g10575' => 'bca', 'BcaB03g12119' => 'bca', 'BcaB03g12120' => 'bca', 'BcaB03g13945' => 'bca', 'BcaB04g17123' => 'bca', 'BcaB04g17867' => 'bca', 'BcaB04g19839' => 'bca', 'BcaB07g30317' => 'bca', 'BcaB07g32432' => 'bca', 'BcaB07g33362' => 'bca', 'BcaB08g36611' => 'bca', 'BcaC01g00028' => 'bca', 'BcaC01g01356' => 'bca', 'BcaC01g02034' => 'bca', 'BcaC01g06051' => 'bca', 'BcaC03g16839' => 'bca', 'BcaC03g17176' => 'bca', 'BcaC05g26829' => 'bca', 'BcaC06g31490' => 'bca', 'BcaC06g35344' => 'bca', 'BcaC06g36570' => 'bca', 'BcaC07g37537' => 'bca', 'BcaC08g43491' => 'bca', 'BcaC08g43773' => 'bca', 'BcaNung00234' => 'bca', 'BcaNung01982' => 'bca', 'BcaNung03707' => 'bca', 'BcaNung06454' => 'bca', 'BolC2t10762H' => 'bol', 'BolC2t11191H' => 'bol', 'BolC3t14322H' => 'bol', 'BolC3t19747H' => 'bol', 'BolC3t21425H' => 'bol', 'BolC4t27800H' => 'bol', 'BolC5t31423H' => 'bol', 'BolC6t35951H' => 'bol', 'BolC6t36282H' => 'bol', 'BolC7t40678H' => 'bol', 'BolC7t40679H' => 'bol', 'BolC7t42222H' => 'bol', 'BolC7t43492H' => 'bol', 'BolC7t46785H' => 'bol', 'BolC8t47853H' => 'bol', 'BolC9t56805H' => 'bol', 'BraA02t08000Z' => 'bra', 'BraA02t08341Z' => 'bra', 'BraA03t10936Z' => 'bra', 'BraA03t15657Z' => 'bra', 'BraA04t18100Z' => 'bra', 'BraA05t20523Z' => 'bra', 'BraA06t23353Z' => 'bra', 'BraA06t27473Z' => 'bra', 'BraA06t27769Z' => 'bra', 'BraA07t28928Z' => 'bra', 'BraA08t32236Z' => 'bra', 'BraA08t32841Z' => 'bra', 'BraA08t34524Z' => 'bra', 'BraA09t38742Z' => 'bra', 'BraA09t39295Z' => 'bra', 'C02p47180' => 'bna', 'C02p50990' => 'bna', 'C03p19360' => 'bna', 'C03p74950' => 'bna', 'C03p91000' => 'bna', 'C04p63260' => 'bna', 'C05p27050' => 'bna', 'C06p08750' => 'bna', 'C06p11490' => 'bna', 'C07p02820' => 'bna', 'C07p17180' => 'bna', 'C07p29440' => 'bna', 'C07p63730' => 'bna', 'C09p39260' => 'bna', 'CAN.G1164.34' => 'can', 'CAN.G1164.39' => 'can', 'CAN.G1530.3' => 'can', 'CAN.G162.61' => 'can', 'CAN.G176.6' => 'can', 'CAN.G289.49' => 'can', 'CAN.G370.21' => 'can', 'CAN.G370.22' => 'can', 'CAN.G371.117' => 'can', 'CAN.G58.37' => 'can', 'CAN.G588.98' => 'can', 'CANSAT21G2266' => 'cansat', 'CANSAT25G2799' => 'cansat', 'CANSAT35G0862' => 'cansat', 'CANSAT35G1704' => 'cansat', 'CANSAT35G1760' => 'cansat', 'CANSAT56G3971' => 'cansat', 'CANSAT56G4116' => 'cansat', 'CANSAT80G1259' => 'cansat', 'CARHR027730' => 'chi', 'CARHR033880' => 'chi', 'CARHR043270' => 'chi', 'CARHR145330' => 'chi', 'CARHR145340' => 'chi', 'CARHR175570' => 'chi', 'CARHR181570' => 'chi', 'CARHR258470' => 'chi', 'CARHR260490' => 'chi', 'CARHR294220' => 'chi', 'Carub.0001s2668' => 'cru', 'Carub.0001s3257' => 'cru', 'Carub.0001s4220' => 'cru', 'Carub.0005s0179' => 'cru', 'Carub.0006s2807' => 'cru', 'Carub.0007s0039' => 'cru', 'Carub.0008s0169' => 'cru', 'Carub.0008s0636' => 'cru', 'Ca_00338_v3' => 'car', 'Ca_00542_v3' => 'car', 'Ca_01844_v3' => 'car', 'Ca_10611_v3' => 'car', 'Ca_13326_v3' => 'car', 'Ca_17944_v3' => 'car', 'Ca_18546_v3' => 'car', 'Ca_24219_v3' => 'car', 'Ca_29972_v3' => 'car', 'CBR_g3681' => 'cbr', 'CBR_g40021' => 'cbr', 'Cc01_g08140' => 'ccan', 'Cc02_g13410' => 'ccan', 'Cc02_g37480' => 'ccan', 'Cc05_g12030' => 'ccan', 'Cc09_g03370' => 'ccan', 'Cc09_g10300' => 'ccan', 'Cc10_g03530' => 'ccan', 'Cc10_g11380' => 'ccan', 'CDE01G0176' => 'cde', 'CDE02G0675' => 'cde', 'CDE02G0942' => 'cde', 'CDE02G1153' => 'cde', 'CDE02G4177' => 'cde', 'CDE04G2117' => 'cde', 'CDE04G2736' => 'cde', 'CDE08G1161' => 'cde', 'CDE09G1238' => 'cde', 'Cfa000467' => 'cfa', 'Cfa000947' => 'cfa', 'Cfa004969' => 'cfa', 'Cfa005284' => 'cfa', 'Cfa008993' => 'cfa', 'Cfa018187' => 'cfa', 'Cfa018454' => 'cfa', 'Cfa020585' => 'cfa', 'Ciclev10000424m.g' => 'ccl', 'Ciclev10003605m.g' => 'ccl', 'Ciclev10007828m.g' => 'ccl', 'Ciclev10014620m.g' => 'ccl', 'Ciclev10015169m.g' => 'ccl', 'Ciclev10018291m.g' => 'ccl', 'Ciclev10028256m.g' => 'ccl', 'Ciclev10033822m.g' => 'ccl', 'CiPaw.05G060300' => 'cil', 'CiPaw.05G085000' => 'cil', 'CiPaw.06G083700' => 'cil', 'CiPaw.06G120300' => 'cil', 'CiPaw.09G060500' => 'cil', 'CiPaw.09G123800' => 'cil', 'CiPaw.11G169700' => 'cil', 'CiPaw.12G118300' => 'cil', 'CiPaw.15G071000' => 'cil', 'CiPaw.15G081900' => 'cil', 'ClCG01G024610' => 'cla', 'ClCG03G006070' => 'cla', 'ClCG05G019250' => 'cla', 'ClCG09G009500' => 'cla', 'ClCG11G008200' => 'cla', 'ClCG11G018080' => 'cla', 'COL.COLO4_17373' => 'col', 'COL.COLO4_22994' => 'col', 'COL.COLO4_26389' => 'col', 'COL.COLO4_27170' => 'col', 'COL.COLO4_31074' => 'col', 'COL.COLO4_31465' => 'col', 'COL.COLO4_36438' => 'col', 'COL.COLO4_36439' => 'col', 'Cpa.g.c38781' => 'cpa', 'Cpa.g.sc128.12' => 'cpa', 'Cpa.g.sc166.7' => 'cpa', 'Cpa.g.sc166.8' => 'cpa', 'Cpa.g.sc20.111' => 'cpa', 'Cpa.g.sc27.31' => 'cpa', 'Cpa.g.sc64.36' => 'cpa', 'Cpa.g.sc64.37' => 'cpa', 'Cpa.g.sc66.49' => 'cpa', 'Cpa.g.sc80.64' => 'cpa', 'CsaV3_1G012320' => 'csa', 'CsaV3_2G008480' => 'csa', 'CsaV3_2G033450' => 'csa', 'CsaV3_3G044830' => 'csa', 'CsaV3_4G033710' => 'csa', 'CsaV3_6G051730' => 'csa', 'CsaV3_7G025350' => 'csa', 'CSS0001067' => 'camsi', 'CSS0005996' => 'camsi', 'CSS0006590' => 'camsi', 'CSS0009673' => 'camsi', 'CSS0010201' => 'camsi', 'CSS0010549' => 'camsi', 'CSS0011364' => 'camsi', 'CSS0014473' => 'camsi', 'CSS0014961' => 'camsi', 'CSS0020191' => 'camsi', 'CSS0021165' => 'camsi', 'CSS0022306' => 'camsi', 'CSS0030591' => 'camsi', 'CSS0030696' => 'camsi', 'CSS0032653' => 'camsi', 'CSS0037487' => 'camsi', 'CSS0041102' => 'camsi', 'CSS0041261' => 'camsi', 'CSS0046246' => 'camsi', 'CSS0049256' => 'camsi', 'DCAR_004075' => 'dca', 'DCAR_011538' => 'dca', 'DCAR_019553' => 'dca', 'DCAR_020952' => 'dca', 'DCAR_021739' => 'dca', 'DCAR_027407' => 'dca', 'DCAR_027913' => 'dca', 'DCAR_028066' => 'dca', 'Dinv05899' => 'din', 'Dinv07563' => 'din', 'Dinv08010' => 'din', 'Dinv14125' => 'din', 'Dinv20172' => 'din', 'Dinv30743' => 'din', 'Dinv31229' => 'din', 'Dinv34162' => 'din', 'Dinv36028' => 'din', 'Dinv39368' => 'din', 'Dinv40565' => 'din', 'Dinv41706' => 'din', 'Duzib052G0089' => 'dzi', 'Duzib116G0641' => 'dzi', 'Duzib132G0069' => 'dzi', 'Duzib132G1219' => 'dzi', 'Duzib147G0278' => 'dzi', 'Duzib160G0480' => 'dzi', 'Duzib170G0661' => 'dzi', 'Duzib177G0591' => 'dzi', 'Duzib187G1353' => 'dzi', 'Duzib192G0858' => 'dzi', 'Duzib192G0883' => 'dzi', 'Duzib213G0506' => 'dzi', 'Duzib235G0289' => 'dzi', 'Duzib251G0422' => 'dzi', 'ECA232G3898' => 'eca', 'ECA233G5950' => 'eca', 'ECA234G1699' => 'eca', 'ECA234G2421' => 'eca', 'ECA236G0426' => 'eca', 'ECA236G4331' => 'eca', 'ECA248G2573' => 'eca', 'EL10Ac1g00077' => 'bvu', 'EL10Ac1g01746' => 'bvu', 'EL10Ac2g03464' => 'bvu', 'EL10Ac4g08176' => 'bvu', 'EL10Ac7g17521' => 'bvu', 'EL10Ac8g20386' => 'bvu', 'EL10Ac9g21343' => 'bvu', 'EL10Ac9g22688' => 'bvu', 'Eucgr.B03434' => 'egr', 'Eucgr.D00618' => 'egr', 'Eucgr.E02395' => 'egr', 'Eucgr.F01129' => 'egr', 'Eucgr.F02622' => 'egr', 'Eucgr.F04207' => 'egr', 'FAN01G0570' => 'fan', 'FAN03G3351' => 'fan', 'FAN06G3702' => 'fan', 'FAN07G2149' => 'fan', 'FAN10G3758' => 'fan', 'FAN11G1170' => 'fan', 'FAN11G2050' => 'fan', 'FAN11G2724' => 'fan', 'FAN12G1700' => 'fan', 'FAN12G2028' => 'fan', 'FAN15G1160' => 'fan', 'FAN15G3063' => 'fan', 'FAN16G2540' => 'fan', 'FAN16G3077' => 'fan', 'FAN16G3624' => 'fan', 'FAN17G0221' => 'fan', 'FAN20G2492' => 'fan', 'FAN20G2905' => 'fan', 'FAN21G0548' => 'fan', 'FAN21G1300' => 'fan', 'FAN22G0077' => 'fan', 'FAN22G1315' => 'fan', 'FAN24G1280' => 'fan', 'FAN24G1445' => 'fan', 'FAN24G3527' => 'fan', 'FAN25G0464' => 'fan', 'FAN25G2885' => 'fan', 'FAN25G3270' => 'fan', 'FAN27G1101' => 'fan', 'FAN27G2846' => 'fan', 'FAN27G3524' => 'fan', 'FvH4_2g11770' => 'fve', 'FvH4_2g15630' => 'fve', 'FvH4_3g05570' => 'fve', 'FvH4_3g09110' => 'fve', 'FvH4_3g19940' => 'fve', 'FvH4_4g04821' => 'fve', 'FvH4_4g31480' => 'fve', 'FvH4_7g01740' => 'fve', 'Glyma.05G130400' => 'gma', 'Glyma.05G156400' => 'gma', 'Glyma.07G197000' => 'gma', 'Glyma.08G085151' => 'gma', 'Glyma.08G114500' => 'gma', 'Glyma.08G300400' => 'gma', 'Glyma.10G215800' => 'gma', 'Glyma.12G224400' => 'gma', 'Glyma.13G179300' => 'gma', 'Glyma.13G218151' => 'gma', 'Glyma.13G238800' => 'gma', 'Glyma.13G276900' => 'gma', 'Glyma.14G078200' => 'gma', 'Glyma.15G074500' => 'gma', 'Glyma.15G094100' => 'gma', 'Glyma.17G247200' => 'gma', 'Glyma.18G120100' => 'gma', 'Glyma.20G176000' => 'gma', 'Gohir.A01G063600' => 'ghi', 'Gohir.A01G170301' => 'ghi', 'Gohir.A02G060500' => 'ghi', 'Gohir.A05G133850' => 'ghi', 'Gohir.A05G161400' => 'ghi', 'Gohir.A06G012900' => 'ghi', 'Gohir.A06G035901' => 'ghi', 'Gohir.A06G127100' => 'ghi', 'Gohir.A06G210500' => 'ghi', 'Gohir.A08G008650' => 'ghi', 'Gohir.A09G072700' => 'ghi', 'Gohir.A09G088301' => 'ghi', 'Gohir.A10G040600' => 'ghi', 'Gohir.A12G036300' => 'ghi', 'Gohir.A12G143350' => 'ghi', 'Gohir.A12G165500' => 'ghi', 'Gohir.A13G145700' => 'ghi', 'Gohir.D01G050000' => 'ghi', 'Gohir.D01G051366' => 'ghi', 'Gohir.D01G161350' => 'ghi', 'Gohir.D02G065900' => 'ghi', 'Gohir.D05G164200' => 'ghi', 'Gohir.D05G355500' => 'ghi', 'Gohir.D06G010400' => 'ghi', 'Gohir.D06G111250' => 'ghi', 'Gohir.D06G132000' => 'ghi', 'Gohir.D06G210500' => 'ghi', 'Gohir.D07G165675' => 'ghi', 'Gohir.D08G062240' => 'ghi', 'Gohir.D08G086101' => 'ghi', 'Gohir.D08G138060' => 'ghi', 'Gohir.D09G072300' => 'ghi', 'Gohir.D10G041400' => 'ghi', 'Gohir.D11G191020' => 'ghi', 'Gohir.D11G212066' => 'ghi', 'Gohir.D12G036300' => 'ghi', 'Gohir.D12G168600' => 'ghi', 'Gohir.D13G150600' => 'ghi', 'Gorai.001G057300' => 'gra', 'Gorai.002G069900' => 'gra', 'Gorai.002G200000' => 'gra', 'Gorai.003G067600' => 'gra', 'Gorai.005G074800' => 'gra', 'Gorai.006G087300' => 'gra', 'Gorai.008G037500' => 'gra', 'Gorai.008G181400' => 'gra', 'Gorai.009G169400' => 'gra', 'Gorai.009G387900' => 'gra', 'Gorai.010G013300' => 'gra', 'Gorai.010G153800' => 'gra', 'Gorai.010G255800' => 'gra', 'Gorai.011G043700' => 'gra', 'Gorai.011G198900' => 'gra', 'Gorai.013G168400' => 'gra', 'GSVIVG01005212001' => 'vvi', 'GSVIVG01006163001' => 'vvi', 'GSVIVG01009625001' => 'vvi', 'GSVIVG01014338001' => 'vvi', 'GSVIVG01020005001' => 'vvi', 'GSVIVG01021450001' => 'vvi', 'GSVIVG01023975001' => 'vvi', 'GSVIVG01034490001' => 'vvi', 'HanXRQChr04g0112071' => 'han', 'HanXRQChr05g0131151' => 'han', 'HanXRQChr09g0262371' => 'han', 'HanXRQChr09g0268401' => 'han', 'HanXRQChr10g0279241' => 'han', 'HanXRQChr10g0297961' => 'han', 'HanXRQChr11g0326231' => 'han', 'HanXRQChr11g0328471' => 'han', 'HanXRQChr16g0507941' => 'han', 'HanXRQChr17g0560211' => 'han', 'Haze_02108' => 'cav', 'Haze_02428' => 'cav', 'Haze_05593' => 'cav', 'Haze_06448' => 'cav', 'Haze_09427' => 'cav', 'Haze_12022' => 'cav', 'Haze_17612' => 'cav', 'Haze_17928' => 'cav', 'Hma1.2p1_0032F.1_g019250' => 'hma', 'Hma1.2p1_0163F.1_g072690' => 'hma', 'Hma1.2p1_0265F.1_g106710' => 'hma', 'Hma1.2p1_0286F.1_g113970' => 'hma', 'Hma1.2p1_0363F.1_g136640' => 'hma', 'Hma1.2p1_0584F.1_g183470' => 'hma', 'Hma1.2p1_0885F.1_g232570' => 'hma', 'HPP92_006022' => 'vpl', 'HPP92_007320' => 'vpl', 'HPP92_011521' => 'vpl', 'HPP92_019387' => 'vpl', 'HPP92_024038' => 'vpl', 'Hund05891' => 'sun', 'Hund06450' => 'sun', 'Hund12053' => 'sun', 'Hund16800' => 'sun', 'Hund21222' => 'sun', 'Hund22896' => 'sun', 'Hund23746' => 'sun', 'Hund27083' => 'sun', 'Lalb_Chr02g0141831' => 'lal', 'Lalb_Chr02g0141841' => 'lal', 'Lalb_Chr05g0220411' => 'lal', 'Lalb_Chr06g0162081' => 'lal', 'Lalb_Chr09g0327651' => 'lal', 'Lalb_Chr13g0295051' => 'lal', 'Lalb_Chr15g0086801' => 'lal', 'Lalb_Chr16g0383781' => 'lal', 'Lalb_Chr16g0383791' => 'lal', 'Lalb_Chr18g0055441' => 'lal', 'Lalb_Chr18g0059611' => 'lal', 'Lalb_Chr20g0109661' => 'lal', 'Lalb_Chr20g0109831' => 'lal', 'Lalb_Chr20g0121871' => 'lal', 'Lalb_Chr22g0355361' => 'lal', 'Lalb_Chr25g0286371' => 'lal', 'Lj1A1187G43' => 'lonja', 'Lj1A1205T50' => 'lonja', 'Lj1A800G33' => 'lonja', 'Lj1C1187T7' => 'lonja', 'Lj1C843T11' => 'lonja', 'Lj1g0010940' => 'lja', 'Lj2A288T69' => 'lonja', 'Lj3g0024276' => 'lja', 'Lj4A47T76' => 'lonja', 'Lj4g0005805' => 'lja', 'Lj4g0006097' => 'lja', 'Lj4g0008528' => 'lja', 'Lj4g0024907' => 'lja', 'Lj5g0012472' => 'lja', 'Lj5g0018648' => 'lja', 'Lj6C789G1' => 'lonja', 'Lj6g0004000' => 'lja', 'Lj7A292G67' => 'lonja', 'Lj7A292T64' => 'lonja', 'Lj9A400T58' => 'lonja', 'Lsat_1_v5_gn_1_126181' => 'lsa', 'Lsat_1_v5_gn_4_123041' => 'lsa', 'Lsat_1_v5_gn_4_133620' => 'lsa', 'Lsat_1_v5_gn_4_53221' => 'lsa', 'Lsat_1_v5_gn_4_71961' => 'lsa', 'Lsat_1_v5_gn_7_105241' => 'lsa', 'Lsat_1_v5_gn_7_21361' => 'lsa', 'Lsat_1_v5_gn_7_28860' => 'lsa', 'Lsat_1_v5_gn_7_31260' => 'lsa', 'Lsat_1_v5_gn_8_52801' => 'lsa', 'Manes.02G191400' => 'mes', 'Manes.03G110100' => 'mes', 'Manes.04G071100' => 'mes', 'Manes.05G100500' => 'mes', 'Manes.05G164700' => 'mes', 'Manes.15G087000' => 'mes', 'Manes.15G121500' => 'mes', 'Manes.16G028300' => 'mes', 'Manes.17G046100' => 'mes', 'Manes.17G069800' => 'mes', 'Manes.18G100500' => 'mes', 'Mapoly0002s0109' => 'mpo', 'Mapoly0024s0007' => 'mpo', 'Mapoly0089s0032' => 'mpo', 'MBI04_g42241_MAGBIO' => 'mbi', 'MBI05_g11988_MAGBIO' => 'mbi', 'MBI05_g35452_MAGBIO' => 'mbi', 'MBI07_g30179_MAGBIO' => 'mbi', 'MBI07_g35859_MAGBIO' => 'mbi', 'MBI07_g35860_MAGBIO' => 'mbi', 'MBI07_g37166_MAGBIO' => 'mbi', 'MBI08_g18172_MAGBIO' => 'mbi', 'MBI09_g08441_MAGBIO' => 'mbi', 'MBI13_g01676_MAGBIO' => 'mbi', 'MBI14_g42955_MAGBIO' => 'mbi', 'MBI16_g13161_MAGBIO' => 'mbi', 'MBI17_g27204_MAGBIO' => 'mbi', 'MBI19_g21595_MAGBIO' => 'mbi', 'MD00G1148400' => 'mdo', 'MD02G1301200' => 'mdo', 'MD03G1227800' => 'mdo', 'MD05G1041100' => 'mdo', 'MD05G1124800' => 'mdo', 'MD05G1284000' => 'mdo', 'MD05G1338800' => 'mdo', 'MD05G1338900' => 'mdo', 'MD07G1022800' => 'mdo', 'MD10G1047500' => 'mdo', 'MD10G1127500' => 'mdo', 'MD10G1262300' => 'mdo', 'MD10G1293800' => 'mdo', 'MD16G1074300' => 'mdo', 'Medtr1g021670' => 'mtr', 'Medtr1g096320' => 'mtr', 'Medtr2g013690' => 'mtr', 'Medtr2g019450' => 'mtr', 'Medtr2g085170' => 'mtr', 'Medtr4g088785' => 'mtr', 'Medtr8g055930' => 'mtr', 'Medtr8g085850' => 'mtr', 'MELO3C002605.2' => 'cme', 'MELO3C003891.2' => 'cme', 'MELO3C004012.2' => 'cme', 'MELO3C007134.2' => 'cme', 'MELO3C008118.2' => 'cme', 'MELO3C016700.2' => 'cme', 'MELO3C024127.2' => 'cme', 'MELO3C033361.2' => 'cme', 'MELO3C033362.2' => 'cme', 'Migut.C00430' => 'egut', 'Migut.C01246' => 'egut', 'Migut.E00101' => 'egut', 'Migut.H01486' => 'egut', 'Migut.H01939' => 'egut', 'Migut.K00360' => 'egut', 'Migut.M00910' => 'egut', 'Migut.M01139' => 'egut', 'Migut.N02677' => 'egut', 'MSTRG.13252' => 'ama', 'MSTRG.14701' => 'ama', 'MSTRG.1521' => 'ama', 'MSTRG.15884' => 'ama', 'MSTRG.16242' => 'ama', 'MSTRG.22285' => 'ama', 'MSTRG.22444' => 'ama', 'MSTRG.2349' => 'ama', 'MSTRG.26308' => 'ama', 'MSTRG.28296' => 'ama', 'MSTRG.9895' => 'ama', 'Nitab4.5_0000110g0060' => 'nta', 'Nitab4.5_0000420g0130' => 'nta', 'Nitab4.5_0000422g0030' => 'nta', 'Nitab4.5_0000560g0180' => 'nta', 'Nitab4.5_0000703g0100' => 'nta', 'Nitab4.5_0000786g0200' => 'nta', 'Nitab4.5_0001336g0020' => 'nta', 'Nitab4.5_0001796g0030' => 'nta', 'Nitab4.5_0003348g0060' => 'nta', 'Nitab4.5_0003698g0040' => 'nta', 'Nitab4.5_0003942g0090' => 'nta', 'Nitab4.5_0004775g0070' => 'nta', 'Nitab4.5_0004864g0030' => 'nta', 'Nitab4.5_0005615g0020' => 'nta', 'Nitab4.5_0009288g0030' => 'nta', 'Nitab4.5_0009341g0010' => 'nta', 'Nitab4.5_0009535g0010' => 'nta', 'Nn1g03995' => 'nnu', 'Nn1g04100' => 'nnu', 'Nn1g06530' => 'nnu', 'Nn3g16404' => 'nnu', 'Nn3g17212' => 'nnu', 'Nn3g20776' => 'nnu', 'Nn3g21923' => 'nnu', 'Nn5g27737' => 'nnu', 'Nn5g29461' => 'nnu', 'Nn7g38355' => 'nnu', 'Nn8g39873' => 'nnu', 'Oeu000548.2' => 'oeu', 'Oeu004672.1' => 'oeu', 'Oeu015605.2' => 'oeu', 'Oeu016092.1' => 'oeu', 'Oeu017879.3' => 'oeu', 'Oeu024910.1' => 'oeu', 'Oeu028965.1' => 'oeu', 'Oeu031269.1' => 'oeu', 'Oeu031270.1' => 'oeu', 'Oeu032535.1' => 'oeu', 'Oeu034151.1' => 'oeu', 'Oeu034152.1' => 'oeu', 'Oeu034588.2' => 'oeu', 'Oeu050846.1' => 'oeu', 'Oeu050849.2' => 'oeu', 'Oeu051063.2' => 'oeu', 'Oeu052368.1' => 'oeu', 'Oeu052370.1' => 'oeu', 'Os01g0210400' => 'osa', 'Os01g0304300' => 'osa', 'Os01g0749100' => 'osa', 'Os02g0745800' => 'osa', 'Os03g0769050' => 'osa', 'Os05g0531500' => 'osa', 'Os06g0724300' => 'osa', 'Os11g0198100' => 'osa', 'Peaxi162Scf00069g01425' => 'pax', 'Peaxi162Scf00280g00811' => 'pax', 'Peaxi162Scf00310g00615' => 'pax', 'Peaxi162Scf00362g00542' => 'pax', 'Peaxi162Scf00461g00310' => 'pax', 'Peaxi162Scf00530g00118' => 'pax', 'Peaxi162Scf00541g00057' => 'pax', 'Peaxi162Scf00661g00017' => 'pax', 'Peaxi162Scf00926g00027' => 'pax', 'Peaxi162Scf01064g00263' => 'pax', 'Peaxi162Scf01211g00135' => 'pax', 'PGR004G2336' => 'pgr', 'PGR042G0327' => 'pgr', 'PGR042G1957' => 'pgr', 'PGR042G2003' => 'pgr', 'PGR042G3929' => 'pgr', 'PGR083G1137' => 'pgr', 'PGR083G1364' => 'pgr', 'PGSC0003DMG400003381' => 'stu', 'PGSC0003DMG400003417' => 'stu', 'PGSC0003DMG400008981' => 'stu', 'PGSC0003DMG400012417' => 'stu', 'PGSC0003DMG400012823' => 'stu', 'PGSC0003DMG400016885' => 'stu', 'PGSC0003DMG400022812' => 'stu', 'PGSC0003DMG400029726' => 'stu', 'PGSC0003DMG401009243' => 'stu', 'PGSC0003DMG401031505' => 'stu', 'PGSC0003DMG402031505' => 'stu', 'Phvul.001G017600' => 'pvu', 'Phvul.002G193500' => 'pvu', 'Phvul.002G228900' => 'pvu', 'Phvul.002G236800' => 'pvu', 'Phvul.003G049500' => 'pvu', 'Phvul.005G072000' => 'pvu', 'Phvul.006G164800' => 'pvu', 'Phvul.006G185100' => 'pvu', 'Phvul.007G090000' => 'pvu', 'Potri.001G399800' => 'ptr', 'Potri.002G149900' => 'ptr', 'Potri.004G044100' => 'ptr', 'Potri.004G177600' => 'ptr', 'Potri.009G138000' => 'ptr', 'Potri.010G094000' => 'ptr', 'Potri.011G053000' => 'ptr', 'Potri.011G119300' => 'ptr', 'Potri.013G113700' => 'ptr', 'Potri.018G107800' => 'ptr', 'Potri.019G084100' => 'ptr', 'Pp3c14_23720' => 'ppa', 'Pp3c16_6340' => 'ppa', 'Pp3c23_13420' => 'ppa', 'Pp3c24_2740' => 'ppa', 'Pp3c25_860' => 'ppa', 'Pp3c8_21750' => 'ppa', 'Prupe.1G273000' => 'ppe', 'Prupe.1G273700' => 'ppe', 'Prupe.1G274100' => 'ppe', 'Prupe.2G023300' => 'ppe', 'Prupe.4G048000' => 'ppe', 'Prupe.4G080400' => 'ppe', 'Prupe.4G181200' => 'ppe', 'Prupe.8G056900' => 'ppe', 'Prupe.8G168700' => 'ppe', 'Psat1g189080' => 'psa', 'Psat1g204760' => 'psa', 'Psat4g175560' => 'psa', 'Psat4g177720' => 'psa', 'Psat5g244240' => 'psa', 'Psat6g010720' => 'psa', 'Psat6g187200' => 'psa', 'Psat7g072040' => 'psa', 'PSO017G3501' => 'pso', 'PSO063G2148' => 'pso', 'PSO063G5608' => 'pso', 'PSO210G6392' => 'pso', 'PSO541G2319' => 'pso', 'PSO541G2836' => 'pso', 'PSO541G4012' => 'pso', 'PSO541G6253' => 'pso', 'PSO675G0580' => 'pso', 'PSO675G0856' => 'pso', 'PSO675G5635' => 'pso', 'PSO675G9157' => 'pso', 'PSO832G1660' => 'pso', 'PSO832G1969' => 'pso', 'QL02p007186' => 'qlo', 'QL02p033904' => 'qlo', 'QL03p064391' => 'qlo', 'QL05p040593' => 'qlo', 'QL05p058242' => 'qlo', 'QL08p021825' => 'qlo', 'QL11p004981' => 'qlo', 'RcHm_v2.0_Chr1g0318301' => 'rch', 'RcHm_v2.0_Chr4g0418501' => 'rch', 'RcHm_v2.0_Chr4g0439971' => 'rch', 'RcHm_v2.0_Chr5g0008541' => 'rch', 'RcHm_v2.0_Chr5g0014101' => 'rch', 'RcHm_v2.0_Chr5g0014131' => 'rch', 'RcHm_v2.0_Chr5g0033621' => 'rch', 'RcHm_v2.0_Chr6g0272041' => 'rch', 'RcHm_v2.0_Chr6g0278831' => 'rch', 'Rhsim02G0130400' => 'rsi', 'Rhsim02G0171100' => 'rsi', 'Rhsim05G0053000' => 'rsi', 'Rhsim05G0053100' => 'rsi', 'Rhsim06G0096500' => 'rsi', 'Rhsim06G0096600' => 'rsi', 'Rhsim06G0199100' => 'rsi', 'Rhsim12G0062300' => 'rsi', 'Rhsim12G0062800' => 'rsi', 'Sabra02G0118600' => 'sbr', 'Sabra04G0027300' => 'sbr', 'Sabra04G0119500' => 'sbr', 'Sabra08G0112500' => 'sbr', 'Sabra11G0036800' => 'sbr', 'Sabra11G0103800' => 'sbr', 'Sabra13G0096300' => 'sbr', 'Sabra16G0262300' => 'sbr', 'Sabra18G0091700' => 'sbr', 'Sabra19G0095400' => 'sbr', 'SalBow6G3080' => 'sbo', 'SalBow7G1157' => 'sbo', 'SalBow7G2123' => 'sbo', 'SalBow7G2285' => 'sbo', 'SalBow7G3537' => 'sbo', 'SalBow8G2947' => 'sbo', 'SalBow8G4463' => 'sbo', 'SalBow8G5466' => 'sbo', 'Sc01g0001750' => 'sci', 'Sc02g0006640' => 'sci', 'Sc02g0006670' => 'sci', 'Sc04g0008220' => 'sci', 'Sc05g0006190' => 'sci', 'Sc08g0002760' => 'sci', 'Sc17g0006170' => 'sci', 'Sc22g0002050' => 'sci', 'Sc23g0001190' => 'sci', 'Sc24g0000980' => 'sci', 'Sed0006245' => 'sed', 'Sed0007543' => 'sed', 'Sed0009411' => 'sed', 'Sed0010765' => 'sed', 'Sed0012944' => 'sed', 'Sed0014682' => 'sed', 'Sed0016174' => 'sed', 'Sed0016796' => 'sed', 'Sed0020317' => 'sed', 'Sed0021467' => 'sed', 'SEGI_01316' => 'sgi', 'SEGI_03374' => 'sgi', 'SEGI_16265' => 'sgi', 'SEGI_18569' => 'sgi', 'SEGI_20351' => 'sgi', 'SEGI_26395' => 'sgi', 'SEGI_29469' => 'sgi', 'SEGI_34771' => 'sgi', 'SEGI_36769' => 'sgi', 'SEGI_37139' => 'sgi', 'SGA_v2.0_scaffold100G29687' => 'sas', 'SGA_v2.0_scaffold118G32472' => 'sas', 'SGA_v2.0_scaffold14G07051' => 'sas', 'SGA_v2.0_scaffold183G39845' => 'sas', 'SGA_v2.0_scaffold1G00174' => 'sas', 'SGA_v2.0_scaffold22G09714' => 'sas', 'SGA_v2.0_scaffold333G48992' => 'sas', 'SGA_v2.0_scaffold46G17491' => 'sas', 'SGA_v2.0_scaffold49G18294' => 'sas', 'SGA_v2.0_scaffold63G21658' => 'sas', 'SHI01741' => 'shi', 'SHI05771' => 'shi', 'SHI18077' => 'shi', 'SHI20525' => 'shi', 'SHI20527' => 'shi', 'SHI20528' => 'shi', 'SMO172G0185' => 'smo', 'SMO198G0020' => 'smo', 'SMO351G0006' => 'smo', 'SMO356G0118' => 'smo', 'SMO358G0296' => 'smo', 'SMO367G0079' => 'smo', 'SMO367G1277' => 'smo', 'Solyc01g014220.3' => 'sly', 'Solyc01g111770.2' => 'sly', 'Solyc02g078180.3' => 'sly', 'Solyc03g006430.3' => 'sly', 'Solyc03g006456.1' => 'sly', 'Solyc03g079860.2' => 'sly', 'Solyc04g079770.3' => 'sly', 'Solyc05g007430.4' => 'sly', 'Solyc07g063150.3' => 'sly', 'Solyc08g016620.3' => 'sly', 'Solyc09g057590.3' => 'sly', 'Solyc09g057600.1' => 'sly', 'Solyc10g009050.3' => 'sly', 'Solyc11g017420.2' => 'sly', 'Sopen01g053810' => 'spe', 'Sopen02g023040' => 'spe', 'Sopen03g002440' => 'spe', 'Sopen04g033350' => 'spe', 'Sopen05g003310' => 'spe', 'Sopen07g004050' => 'spe', 'Sopen07g031340' => 'spe', 'Sopen08g006990' => 'spe', 'Sopen10g004830' => 'spe', 'Sopen11g009370' => 'spe', 'Sp1g24450' => 'spa', 'Sp1g29670' => 'spa', 'Sp1g39600' => 'spa', 'Sp2g11080' => 'spa', 'Sp2g13970' => 'spa', 'Sp4g16130' => 'spa', 'Sp6g13080' => 'spa', 'Sp7g37270' => 'spa', 'TAR371G0065' => 'tar', 'TAR376G0340' => 'tar', 'TAR376G0435' => 'tar', 'TAR381G0002' => 'tar', 'TAR381G1236' => 'tar', 'TAR624G0055' => 'tar', 'TAR624G0324' => 'tar', 'TAR624G0696' => 'tar', 'TAR624G0906' => 'tar', 'TAR625G0107' => 'tar', 'TAR626G0015' => 'tar', 'TAR626G1356' => 'tar', 'TAR627G0888' => 'tar', 'TAR628G0399' => 'tar', 'TAR628G1327' => 'tar', 'TAR629G2831' => 'tar', 'TAR629G2874' => 'tar', 'TAR633G1432' => 'tar', 'TAR633G2771' => 'tar', 'THA.LOC104803394' => 'tha', 'THA.LOC104805153' => 'tha', 'THA.LOC104806784' => 'tha', 'THA.LOC104810473' => 'tha', 'THA.LOC104813100' => 'tha', 'THA.LOC104814215' => 'tha', 'THA.LOC104815554' => 'tha', 'THA.LOC104820544' => 'tha', 'THA.LOC104824754' => 'tha', 'THA.LOC104827717' => 'tha', 'Thecc.02G031400' => 'tca', 'Thecc.02G055900' => 'tca', 'Thecc.02G350800' => 'tca', 'Thecc.06G150900' => 'tca', 'Thecc.06G186600' => 'tca', 'Thecc.07G089600' => 'tca', 'Thecc.08G020400' => 'tca', 'Thecc.08G182100' => 'tca', 'Thhalv10000873m.g' => 'esa', 'Thhalv10004185m.g' => 'esa', 'Thhalv10006981m.g' => 'esa', 'Thhalv10007204m.g' => 'esa', 'Thhalv10011374m.g' => 'esa', 'Thhalv10013482m.g' => 'esa', 'Thhalv10017801m.g' => 'esa', 'Thhalv10024983m.g' => 'esa', 'TPR.G12072' => 'tpr', 'TPR.G15769' => 'tpr', 'TPR.G16504' => 'tpr', 'TPR.G16506' => 'tpr', 'TPR.G24345' => 'tpr', 'TPR.G26666' => 'tpr', 'TPR.G27320' => 'tpr', 'TPR.G31819' => 'tpr', 'TPR.G38879' => 'tpr', 'TPR.G39015' => 'tpr', 'TPR.G8819' => 'tpr', 'TWI09G0924' => 'twi', 'TWI12G0811' => 'twi', 'TWI12G1294' => 'twi', 'TWI31G0150' => 'twi', 'TWI36G1262' => 'twi', 'TWI38G1287' => 'twi', 'TWI38G1633' => 'twi', 'TWI38G1982' => 'twi', 'TWI39G0116' => 'twi', 'TWI60G1011' => 'twi', 'TWI63G0171' => 'twi', 'TWI73G0839' => 'twi', 'TWI79G1511' => 'twi', 'unitig_0.g915' => 'ugi', 'unitig_0.g916' => 'ugi', 'unitig_21.g20219' => 'ugi', 'unitig_21.g20416' => 'ugi', 'unitig_578.g16132' => 'ugi', 'unitig_578.g16718' => 'ugi', 'unitig_62.g23481' => 'ugi', 'unitig_744.g24535' => 'ugi', 'unitig_749.g13525' => 'ugi', 'vmacro01248' => 'vma', 'vmacro02290' => 'vma', 'vmacro10946' => 'vma', 'vmacro11865' => 'vma', 'vmacro12493' => 'vma', 'vmacro17322' => 'vma', 'vmacro21599' => 'vma', 'vmacro23041' => 'vma', 'VMungo0251G0004' => 'vmu', 'VMungo0251G2639' => 'vmu', 'VMungo0251G2967' => 'vmu', 'VMungo0540G0864' => 'vmu', 'VMungo0540G1569' => 'vmu', 'VMungo0647G0317' => 'vmu', 'VMungo0720G1373' => 'vmu', 'VMungo0720G1508' => 'vmu', 'VMungo1080G0485' => 'vmu', 'VMungo1215G3177' => 'vmu', 'Zm00001eb112600' => 'zma', 'Zm00001eb120220' => 'zma', 'Zm00001eb153240' => 'zma', 'Zm00001eb168880' => 'zma', 'Zm00001eb213920' => 'zma', 'Zm00001eb228280' => 'zma', 'Zm00001eb254580' => 'zma', 'Zm00001eb272180' => 'zma', 'Zm00001eb293190' => 'zma', 'Zm00001eb322930' => 'zma', 'Zm00001eb353360' => 'zma', 'Zm00001eb353390' => 'zma', 'Zm00001eb353430' => 'zma', 'Zm00001eb353440' => 'zma', 'Zm00001eb353780' => 'zma' ), 'gf_id' => 'HOM05D000499', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000499' ), 'data_identifier' => 'HOM05D000499', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000499', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1066', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p29780' => 'bna', 'A02p33180' => 'bna', 'A03p16470' => 'bna', 'A03p66010' => 'bna', 'A04p25970' => 'bna', 'A06p01270' => 'bna', 'A06p46080' => 'bna', 'A07p11400' => 'bna', 'A08p01840' => 'bna', 'A08p08230' => 'bna', 'A08p25740' => 'bna', 'A09p32070' => 'bna', 'A09p37830' => 'bna', 'A09p42840' => 'bna', 'A09p42850' => 'bna', 'Aa31LG10G2060' => 'aar', 'Aa31LG2G7410' => 'aar', 'Aa31LG6G10200' => 'aar', 'Aa31LG6G16680' => 'aar', 'Aa31LG6G8470' => 'aar', 'Aa31LG9G12730' => 'aar', 'Aa31LG9G13680' => 'aar', 'Aa31LG9G14920' => 'aar', 'Aa31LG9G6650' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4977' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5467' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3254' => 'aag', 'Actinidia02578' => 'ach', 'Actinidia07693' => 'ach', 'Actinidia08413' => 'ach', 'Actinidia08414' => 'ach', 'Actinidia15289' => 'ach', 'Actinidia19871' => 'ach', 'Actinidia21475' => 'ach', 'Actinidia22576' => 'ach', 'Actinidia28327' => 'ach', 'Actinidia32491' => 'ach', 'Actinidia39463' => 'ach', 'Actinidia39571' => 'ach', 'Ah.01g013750' => 'amhyb', 'Ah.01g023210' => 'amhyb', 'Ah.04g164850' => 'amhyb', 'Ah.05g178060' => 'amhyb', 'Ah.07g204270' => 'amhyb', 'Ah.07g208480' => 'amhyb', 'Ah.09g237410' => 'amhyb', 'Ah.14g089460' => 'amhyb', 'AL1G41790' => 'aly', 'AL1G49050' => 'aly', 'AL1G53810' => 'aly', 'AL1G61400' => 'aly', 'AL4G18580' => 'aly', 'AL5G12510' => 'aly', 'AL5G12540' => 'aly', 'AL6G43230' => 'aly', 'AL7G10370' => 'aly', 'AL7G19250' => 'aly', 'AL8G12240' => 'aly', 'AL8G18540' => 'aly', 'Aqoxy1G02409' => 'aox', 'Aqoxy2G03993' => 'aox', 'Aqoxy3G03357' => 'aox', 'Aqoxy4G00785' => 'aox', 'Aqoxy5G02598' => 'aox', 'Aqoxy6G00132' => 'aox', 'Aqoxy7G01776' => 'aox', 'Aqoxy7G02316' => 'aox', 'Aqoxy7G03973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.12AFKW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B8730' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27IQR1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3F75VG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3RE0GA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41TCQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.527VTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FIR39' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5W8UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DA38EV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ63HS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H1I32C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HC27T5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4M8AP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7N3CZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9UVDZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LS1NQA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT1D4B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SKC4TM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCFV76' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF9Q1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQWD9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1ZM88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WE07RT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YCK7VH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJE6Q6' => 'arhy', 'AT1G28240' => 'ath', 'AT1G34550' => 'ath', 'AT1G53040' => 'ath', 'AT2G02910' => 'ath', 'AT4G09630' => 'ath', 'AT4G38500' => 'ath', 'AT5G42660' => 'ath', 'AT5G46220' => 'ath', 'ATR0152G026' => 'atr', 'ATR0564G343' => 'atr', 'ATR0706G151' => 'atr', 'ATR0733G207' => 'atr', 'ATR0751G234' => 'atr', 'ATR0807G048' => 'atr', 'ATR1091G084' => 'atr', 'Atru.chr10.1229' => 'acertr', 'Atru.chr10.1230' => 'acertr', 'Atru.chr10.1874' => 'acertr', 'Atru.chr11.1808' => 'acertr', 'Atru.chr13.1795' => 'acertr', 'Atru.chr13.570' => 'acertr', 'Atru.chr2.2608' => 'acertr', 'Atru.chr2.2609' => 'acertr', 'Atru.chr5.3428' => 'acertr', 'Atru.chr8.1171' => 'acertr', 'AUR62004651' => 'cqu', 'AUR62008675' => 'cqu', 'AUR62010014' => 'cqu', 'AUR62013004' => 'cqu', 'AUR62014825' => 'cqu', 'AUR62015015' => 'cqu', 'AUR62015151' => 'cqu', 'AUR62017020' => 'cqu', 'AUR62019422' => 'cqu', 'AUR62023570' => 'cqu', 'AUR62025571' => 'cqu', 'AUR62029098' => 'cqu', 'AUR62033863' => 'cqu', 'AUR62034296' => 'cqu', 'AUR62040075' => 'cqu', 'BcaB02g07334' => 'bca', 'BcaB02g10575' => 'bca', 'BcaB03g12119' => 'bca', 'BcaB03g12120' => 'bca', 'BcaB03g13945' => 'bca', 'BcaB04g17123' => 'bca', 'BcaB04g17867' => 'bca', 'BcaB04g19839' => 'bca', 'BcaB07g30317' => 'bca', 'BcaB07g32432' => 'bca', 'BcaB07g33362' => 'bca', 'BcaB08g36611' => 'bca', 'BcaC01g00028' => 'bca', 'BcaC01g01356' => 'bca', 'BcaC01g02034' => 'bca', 'BcaC01g06051' => 'bca', 'BcaC03g16839' => 'bca', 'BcaC03g17176' => 'bca', 'BcaC05g26829' => 'bca', 'BcaC06g31490' => 'bca', 'BcaC06g35344' => 'bca', 'BcaC06g36570' => 'bca', 'BcaC07g37537' => 'bca', 'BcaC08g43491' => 'bca', 'BcaC08g43773' => 'bca', 'BcaNung00234' => 'bca', 'BcaNung01982' => 'bca', 'BcaNung03707' => 'bca', 'BcaNung06454' => 'bca', 'BolC2t10762H' => 'bol', 'BolC2t11191H' => 'bol', 'BolC3t14322H' => 'bol', 'BolC3t19747H' => 'bol', 'BolC3t21425H' => 'bol', 'BolC4t27800H' => 'bol', 'BolC5t31423H' => 'bol', 'BolC6t35951H' => 'bol', 'BolC6t36282H' => 'bol', 'BolC7t40678H' => 'bol', 'BolC7t40679H' => 'bol', 'BolC7t42222H' => 'bol', 'BolC7t43492H' => 'bol', 'BolC7t46785H' => 'bol', 'BolC8t47853H' => 'bol', 'BolC9t56805H' => 'bol', 'BraA02t08000Z' => 'bra', 'BraA02t08341Z' => 'bra', 'BraA03t10936Z' => 'bra', 'BraA03t15657Z' => 'bra', 'BraA04t18100Z' => 'bra', 'BraA05t20523Z' => 'bra', 'BraA06t23353Z' => 'bra', 'BraA06t27473Z' => 'bra', 'BraA06t27769Z' => 'bra', 'BraA07t28928Z' => 'bra', 'BraA08t32236Z' => 'bra', 'BraA08t32841Z' => 'bra', 'BraA08t34524Z' => 'bra', 'BraA09t38742Z' => 'bra', 'BraA09t39295Z' => 'bra', 'C02p47180' => 'bna', 'C02p50990' => 'bna', 'C03p19360' => 'bna', 'C03p74950' => 'bna', 'C03p91000' => 'bna', 'C04p63260' => 'bna', 'C05p27050' => 'bna', 'C06p08750' => 'bna', 'C06p11490' => 'bna', 'C07p02820' => 'bna', 'C07p17180' => 'bna', 'C07p29440' => 'bna', 'C07p63730' => 'bna', 'C09p39260' => 'bna', 'CAN.G1164.34' => 'can', 'CAN.G1164.39' => 'can', 'CAN.G1530.3' => 'can', 'CAN.G162.61' => 'can', 'CAN.G176.6' => 'can', 'CAN.G289.49' => 'can', 'CAN.G370.21' => 'can', 'CAN.G370.22' => 'can', 'CAN.G371.117' => 'can', 'CAN.G58.37' => 'can', 'CAN.G588.98' => 'can', 'CANSAT21G2266' => 'cansat', 'CANSAT25G2799' => 'cansat', 'CANSAT35G0862' => 'cansat', 'CANSAT35G1704' => 'cansat', 'CANSAT35G1760' => 'cansat', 'CANSAT56G3971' => 'cansat', 'CANSAT56G4116' => 'cansat', 'CANSAT80G1259' => 'cansat', 'CARHR027730' => 'chi', 'CARHR033880' => 'chi', 'CARHR043270' => 'chi', 'CARHR145330' => 'chi', 'CARHR145340' => 'chi', 'CARHR175570' => 'chi', 'CARHR181570' => 'chi', 'CARHR258470' => 'chi', 'CARHR260490' => 'chi', 'CARHR294220' => 'chi', 'Carub.0001s2668' => 'cru', 'Carub.0001s3257' => 'cru', 'Carub.0001s4220' => 'cru', 'Carub.0005s0179' => 'cru', 'Carub.0006s2807' => 'cru', 'Carub.0007s0039' => 'cru', 'Carub.0008s0169' => 'cru', 'Carub.0008s0636' => 'cru', 'Ca_00338_v3' => 'car', 'Ca_00542_v3' => 'car', 'Ca_01844_v3' => 'car', 'Ca_10611_v3' => 'car', 'Ca_13326_v3' => 'car', 'Ca_17944_v3' => 'car', 'Ca_18546_v3' => 'car', 'Ca_24219_v3' => 'car', 'Ca_29972_v3' => 'car', 'CBR_g3681' => 'cbr', 'CBR_g40021' => 'cbr', 'Cc01_g08140' => 'ccan', 'Cc02_g13410' => 'ccan', 'Cc02_g37480' => 'ccan', 'Cc05_g12030' => 'ccan', 'Cc09_g03370' => 'ccan', 'Cc09_g10300' => 'ccan', 'Cc10_g03530' => 'ccan', 'Cc10_g11380' => 'ccan', 'CDE01G0176' => 'cde', 'CDE02G0675' => 'cde', 'CDE02G0942' => 'cde', 'CDE02G1153' => 'cde', 'CDE02G4177' => 'cde', 'CDE04G2117' => 'cde', 'CDE04G2736' => 'cde', 'CDE08G1161' => 'cde', 'CDE09G1238' => 'cde', 'Cfa000467' => 'cfa', 'Cfa000947' => 'cfa', 'Cfa004969' => 'cfa', 'Cfa005284' => 'cfa', 'Cfa008993' => 'cfa', 'Cfa018187' => 'cfa', 'Cfa018454' => 'cfa', 'Cfa020585' => 'cfa', 'Ciclev10000424m.g' => 'ccl', 'Ciclev10003605m.g' => 'ccl', 'Ciclev10007828m.g' => 'ccl', 'Ciclev10014620m.g' => 'ccl', 'Ciclev10015169m.g' => 'ccl', 'Ciclev10018291m.g' => 'ccl', 'Ciclev10028256m.g' => 'ccl', 'Ciclev10033822m.g' => 'ccl', 'CiPaw.05G060300' => 'cil', 'CiPaw.05G085000' => 'cil', 'CiPaw.06G083700' => 'cil', 'CiPaw.06G120300' => 'cil', 'CiPaw.09G060500' => 'cil', 'CiPaw.09G123800' => 'cil', 'CiPaw.11G169700' => 'cil', 'CiPaw.12G118300' => 'cil', 'CiPaw.15G071000' => 'cil', 'CiPaw.15G081900' => 'cil', 'ClCG01G024610' => 'cla', 'ClCG03G006070' => 'cla', 'ClCG05G019250' => 'cla', 'ClCG09G009500' => 'cla', 'ClCG11G008200' => 'cla', 'ClCG11G018080' => 'cla', 'COL.COLO4_17373' => 'col', 'COL.COLO4_22994' => 'col', 'COL.COLO4_26389' => 'col', 'COL.COLO4_27170' => 'col', 'COL.COLO4_31074' => 'col', 'COL.COLO4_31465' => 'col', 'COL.COLO4_36438' => 'col', 'COL.COLO4_36439' => 'col', 'Cpa.g.c38781' => 'cpa', 'Cpa.g.sc128.12' => 'cpa', 'Cpa.g.sc166.7' => 'cpa', 'Cpa.g.sc166.8' => 'cpa', 'Cpa.g.sc20.111' => 'cpa', 'Cpa.g.sc27.31' => 'cpa', 'Cpa.g.sc64.36' => 'cpa', 'Cpa.g.sc64.37' => 'cpa', 'Cpa.g.sc66.49' => 'cpa', 'Cpa.g.sc80.64' => 'cpa', 'CsaV3_1G012320' => 'csa', 'CsaV3_2G008480' => 'csa', 'CsaV3_2G033450' => 'csa', 'CsaV3_3G044830' => 'csa', 'CsaV3_4G033710' => 'csa', 'CsaV3_6G051730' => 'csa', 'CsaV3_7G025350' => 'csa', 'CSS0001067' => 'camsi', 'CSS0005996' => 'camsi', 'CSS0006590' => 'camsi', 'CSS0009673' => 'camsi', 'CSS0010201' => 'camsi', 'CSS0010549' => 'camsi', 'CSS0011364' => 'camsi', 'CSS0014473' => 'camsi', 'CSS0014961' => 'camsi', 'CSS0020191' => 'camsi', 'CSS0021165' => 'camsi', 'CSS0022306' => 'camsi', 'CSS0030591' => 'camsi', 'CSS0030696' => 'camsi', 'CSS0032653' => 'camsi', 'CSS0037487' => 'camsi', 'CSS0041102' => 'camsi', 'CSS0041261' => 'camsi', 'CSS0046246' => 'camsi', 'CSS0049256' => 'camsi', 'DCAR_004075' => 'dca', 'DCAR_011538' => 'dca', 'DCAR_019553' => 'dca', 'DCAR_020952' => 'dca', 'DCAR_021739' => 'dca', 'DCAR_027407' => 'dca', 'DCAR_027913' => 'dca', 'DCAR_028066' => 'dca', 'Dinv05899' => 'din', 'Dinv07563' => 'din', 'Dinv08010' => 'din', 'Dinv14125' => 'din', 'Dinv20172' => 'din', 'Dinv30743' => 'din', 'Dinv31229' => 'din', 'Dinv34162' => 'din', 'Dinv36028' => 'din', 'Dinv39368' => 'din', 'Dinv40565' => 'din', 'Dinv41706' => 'din', 'Duzib052G0089' => 'dzi', 'Duzib116G0641' => 'dzi', 'Duzib132G0069' => 'dzi', 'Duzib132G1219' => 'dzi', 'Duzib147G0278' => 'dzi', 'Duzib160G0480' => 'dzi', 'Duzib170G0661' => 'dzi', 'Duzib177G0591' => 'dzi', 'Duzib187G1353' => 'dzi', 'Duzib192G0858' => 'dzi', 'Duzib192G0883' => 'dzi', 'Duzib213G0506' => 'dzi', 'Duzib235G0289' => 'dzi', 'Duzib251G0422' => 'dzi', 'ECA232G3898' => 'eca', 'ECA233G5950' => 'eca', 'ECA234G1699' => 'eca', 'ECA234G2421' => 'eca', 'ECA236G0426' => 'eca', 'ECA236G4331' => 'eca', 'ECA248G2573' => 'eca', 'EL10Ac1g00077' => 'bvu', 'EL10Ac1g01746' => 'bvu', 'EL10Ac2g03464' => 'bvu', 'EL10Ac4g08176' => 'bvu', 'EL10Ac7g17521' => 'bvu', 'EL10Ac8g20386' => 'bvu', 'EL10Ac9g21343' => 'bvu', 'EL10Ac9g22688' => 'bvu', 'Eucgr.B03434' => 'egr', 'Eucgr.D00618' => 'egr', 'Eucgr.E02395' => 'egr', 'Eucgr.F01129' => 'egr', 'Eucgr.F02622' => 'egr', 'Eucgr.F04207' => 'egr', 'FAN01G0570' => 'fan', 'FAN03G3351' => 'fan', 'FAN06G3702' => 'fan', 'FAN07G2149' => 'fan', 'FAN10G3758' => 'fan', 'FAN11G1170' => 'fan', 'FAN11G2050' => 'fan', 'FAN11G2724' => 'fan', 'FAN12G1700' => 'fan', 'FAN12G2028' => 'fan', 'FAN15G1160' => 'fan', 'FAN15G3063' => 'fan', 'FAN16G2540' => 'fan', 'FAN16G3077' => 'fan', 'FAN16G3624' => 'fan', 'FAN17G0221' => 'fan', 'FAN20G2492' => 'fan', 'FAN20G2905' => 'fan', 'FAN21G0548' => 'fan', 'FAN21G1300' => 'fan', 'FAN22G0077' => 'fan', 'FAN22G1315' => 'fan', 'FAN24G1280' => 'fan', 'FAN24G1445' => 'fan', 'FAN24G3527' => 'fan', 'FAN25G0464' => 'fan', 'FAN25G2885' => 'fan', 'FAN25G3270' => 'fan', 'FAN27G1101' => 'fan', 'FAN27G2846' => 'fan', 'FAN27G3524' => 'fan', 'FvH4_2g11770' => 'fve', 'FvH4_2g15630' => 'fve', 'FvH4_3g05570' => 'fve', 'FvH4_3g09110' => 'fve', 'FvH4_3g19940' => 'fve', 'FvH4_4g04821' => 'fve', 'FvH4_4g31480' => 'fve', 'FvH4_7g01740' => 'fve', 'Glyma.05G130400' => 'gma', 'Glyma.05G156400' => 'gma', 'Glyma.07G197000' => 'gma', 'Glyma.08G085151' => 'gma', 'Glyma.08G114500' => 'gma', 'Glyma.08G300400' => 'gma', 'Glyma.10G215800' => 'gma', 'Glyma.12G224400' => 'gma', 'Glyma.13G179300' => 'gma', 'Glyma.13G218151' => 'gma', 'Glyma.13G238800' => 'gma', 'Glyma.13G276900' => 'gma', 'Glyma.14G078200' => 'gma', 'Glyma.15G074500' => 'gma', 'Glyma.15G094100' => 'gma', 'Glyma.17G247200' => 'gma', 'Glyma.18G120100' => 'gma', 'Glyma.20G176000' => 'gma', 'Gohir.A01G063600' => 'ghi', 'Gohir.A01G170301' => 'ghi', 'Gohir.A02G060500' => 'ghi', 'Gohir.A05G133850' => 'ghi', 'Gohir.A05G161400' => 'ghi', 'Gohir.A06G012900' => 'ghi', 'Gohir.A06G035901' => 'ghi', 'Gohir.A06G127100' => 'ghi', 'Gohir.A06G210500' => 'ghi', 'Gohir.A08G008650' => 'ghi', 'Gohir.A09G072700' => 'ghi', 'Gohir.A09G088301' => 'ghi', 'Gohir.A10G040600' => 'ghi', 'Gohir.A12G036300' => 'ghi', 'Gohir.A12G143350' => 'ghi', 'Gohir.A12G165500' => 'ghi', 'Gohir.A13G145700' => 'ghi', 'Gohir.D01G050000' => 'ghi', 'Gohir.D01G051366' => 'ghi', 'Gohir.D01G161350' => 'ghi', 'Gohir.D02G065900' => 'ghi', 'Gohir.D05G164200' => 'ghi', 'Gohir.D05G355500' => 'ghi', 'Gohir.D06G010400' => 'ghi', 'Gohir.D06G111250' => 'ghi', 'Gohir.D06G132000' => 'ghi', 'Gohir.D06G210500' => 'ghi', 'Gohir.D07G165675' => 'ghi', 'Gohir.D08G062240' => 'ghi', 'Gohir.D08G086101' => 'ghi', 'Gohir.D08G138060' => 'ghi', 'Gohir.D09G072300' => 'ghi', 'Gohir.D10G041400' => 'ghi', 'Gohir.D11G191020' => 'ghi', 'Gohir.D11G212066' => 'ghi', 'Gohir.D12G036300' => 'ghi', 'Gohir.D12G168600' => 'ghi', 'Gohir.D13G150600' => 'ghi', 'Gorai.001G057300' => 'gra', 'Gorai.002G069900' => 'gra', 'Gorai.002G200000' => 'gra', 'Gorai.003G067600' => 'gra', 'Gorai.005G074800' => 'gra', 'Gorai.006G087300' => 'gra', 'Gorai.008G037500' => 'gra', 'Gorai.008G181400' => 'gra', 'Gorai.009G169400' => 'gra', 'Gorai.009G387900' => 'gra', 'Gorai.010G013300' => 'gra', 'Gorai.010G153800' => 'gra', 'Gorai.010G255800' => 'gra', 'Gorai.011G043700' => 'gra', 'Gorai.011G198900' => 'gra', 'Gorai.013G168400' => 'gra', 'GSVIVG01005212001' => 'vvi', 'GSVIVG01006163001' => 'vvi', 'GSVIVG01009625001' => 'vvi', 'GSVIVG01014338001' => 'vvi', 'GSVIVG01020005001' => 'vvi', 'GSVIVG01021450001' => 'vvi', 'GSVIVG01023975001' => 'vvi', 'GSVIVG01034490001' => 'vvi', 'HanXRQChr04g0112071' => 'han', 'HanXRQChr05g0131151' => 'han', 'HanXRQChr09g0262371' => 'han', 'HanXRQChr09g0268401' => 'han', 'HanXRQChr10g0279241' => 'han', 'HanXRQChr10g0297961' => 'han', 'HanXRQChr11g0326231' => 'han', 'HanXRQChr11g0328471' => 'han', 'HanXRQChr16g0507941' => 'han', 'HanXRQChr17g0560211' => 'han', 'Haze_02108' => 'cav', 'Haze_02428' => 'cav', 'Haze_05593' => 'cav', 'Haze_06448' => 'cav', 'Haze_09427' => 'cav', 'Haze_12022' => 'cav', 'Haze_17612' => 'cav', 'Haze_17928' => 'cav', 'Hma1.2p1_0032F.1_g019250' => 'hma', 'Hma1.2p1_0163F.1_g072690' => 'hma', 'Hma1.2p1_0265F.1_g106710' => 'hma', 'Hma1.2p1_0286F.1_g113970' => 'hma', 'Hma1.2p1_0363F.1_g136640' => 'hma', 'Hma1.2p1_0584F.1_g183470' => 'hma', 'Hma1.2p1_0885F.1_g232570' => 'hma', 'HPP92_006022' => 'vpl', 'HPP92_007320' => 'vpl', 'HPP92_011521' => 'vpl', 'HPP92_019387' => 'vpl', 'HPP92_024038' => 'vpl', 'Hund05891' => 'sun', 'Hund06450' => 'sun', 'Hund12053' => 'sun', 'Hund16800' => 'sun', 'Hund21222' => 'sun', 'Hund22896' => 'sun', 'Hund23746' => 'sun', 'Hund27083' => 'sun', 'Lalb_Chr02g0141831' => 'lal', 'Lalb_Chr02g0141841' => 'lal', 'Lalb_Chr05g0220411' => 'lal', 'Lalb_Chr06g0162081' => 'lal', 'Lalb_Chr09g0327651' => 'lal', 'Lalb_Chr13g0295051' => 'lal', 'Lalb_Chr15g0086801' => 'lal', 'Lalb_Chr16g0383781' => 'lal', 'Lalb_Chr16g0383791' => 'lal', 'Lalb_Chr18g0055441' => 'lal', 'Lalb_Chr18g0059611' => 'lal', 'Lalb_Chr20g0109661' => 'lal', 'Lalb_Chr20g0109831' => 'lal', 'Lalb_Chr20g0121871' => 'lal', 'Lalb_Chr22g0355361' => 'lal', 'Lalb_Chr25g0286371' => 'lal', 'Lj1A1187G43' => 'lonja', 'Lj1A1205T50' => 'lonja', 'Lj1A800G33' => 'lonja', 'Lj1C1187T7' => 'lonja', 'Lj1C843T11' => 'lonja', 'Lj1g0010940' => 'lja', 'Lj2A288T69' => 'lonja', 'Lj3g0024276' => 'lja', 'Lj4A47T76' => 'lonja', 'Lj4g0005805' => 'lja', 'Lj4g0006097' => 'lja', 'Lj4g0008528' => 'lja', 'Lj4g0024907' => 'lja', 'Lj5g0012472' => 'lja', 'Lj5g0018648' => 'lja', 'Lj6C789G1' => 'lonja', 'Lj6g0004000' => 'lja', 'Lj7A292G67' => 'lonja', 'Lj7A292T64' => 'lonja', 'Lj9A400T58' => 'lonja', 'Lsat_1_v5_gn_1_126181' => 'lsa', 'Lsat_1_v5_gn_4_123041' => 'lsa', 'Lsat_1_v5_gn_4_133620' => 'lsa', 'Lsat_1_v5_gn_4_53221' => 'lsa', 'Lsat_1_v5_gn_4_71961' => 'lsa', 'Lsat_1_v5_gn_7_105241' => 'lsa', 'Lsat_1_v5_gn_7_21361' => 'lsa', 'Lsat_1_v5_gn_7_28860' => 'lsa', 'Lsat_1_v5_gn_7_31260' => 'lsa', 'Lsat_1_v5_gn_8_52801' => 'lsa', 'Manes.02G191400' => 'mes', 'Manes.03G110100' => 'mes', 'Manes.04G071100' => 'mes', 'Manes.05G100500' => 'mes', 'Manes.05G164700' => 'mes', 'Manes.15G087000' => 'mes', 'Manes.15G121500' => 'mes', 'Manes.16G028300' => 'mes', 'Manes.17G046100' => 'mes', 'Manes.17G069800' => 'mes', 'Manes.18G100500' => 'mes', 'Mapoly0002s0109' => 'mpo', 'Mapoly0024s0007' => 'mpo', 'Mapoly0089s0032' => 'mpo', 'MBI04_g42241_MAGBIO' => 'mbi', 'MBI05_g11988_MAGBIO' => 'mbi', 'MBI05_g35452_MAGBIO' => 'mbi', 'MBI07_g30179_MAGBIO' => 'mbi', 'MBI07_g35859_MAGBIO' => 'mbi', 'MBI07_g35860_MAGBIO' => 'mbi', 'MBI07_g37166_MAGBIO' => 'mbi', 'MBI08_g18172_MAGBIO' => 'mbi', 'MBI09_g08441_MAGBIO' => 'mbi', 'MBI13_g01676_MAGBIO' => 'mbi', 'MBI14_g42955_MAGBIO' => 'mbi', 'MBI16_g13161_MAGBIO' => 'mbi', 'MBI17_g27204_MAGBIO' => 'mbi', 'MBI19_g21595_MAGBIO' => 'mbi', 'MD00G1148400' => 'mdo', 'MD02G1301200' => 'mdo', 'MD03G1227800' => 'mdo', 'MD05G1041100' => 'mdo', 'MD05G1124800' => 'mdo', 'MD05G1284000' => 'mdo', 'MD05G1338800' => 'mdo', 'MD05G1338900' => 'mdo', 'MD07G1022800' => 'mdo', 'MD10G1047500' => 'mdo', 'MD10G1127500' => 'mdo', 'MD10G1262300' => 'mdo', 'MD10G1293800' => 'mdo', 'MD16G1074300' => 'mdo', 'Medtr1g021670' => 'mtr', 'Medtr1g096320' => 'mtr', 'Medtr2g013690' => 'mtr', 'Medtr2g019450' => 'mtr', 'Medtr2g085170' => 'mtr', 'Medtr4g088785' => 'mtr', 'Medtr8g055930' => 'mtr', 'Medtr8g085850' => 'mtr', 'MELO3C002605.2' => 'cme', 'MELO3C003891.2' => 'cme', 'MELO3C004012.2' => 'cme', 'MELO3C007134.2' => 'cme', 'MELO3C008118.2' => 'cme', 'MELO3C016700.2' => 'cme', 'MELO3C024127.2' => 'cme', 'MELO3C033361.2' => 'cme', 'MELO3C033362.2' => 'cme', 'Migut.C00430' => 'egut', 'Migut.C01246' => 'egut', 'Migut.E00101' => 'egut', 'Migut.H01486' => 'egut', 'Migut.H01939' => 'egut', 'Migut.K00360' => 'egut', 'Migut.M00910' => 'egut', 'Migut.M01139' => 'egut', 'Migut.N02677' => 'egut', 'MSTRG.13252' => 'ama', 'MSTRG.14701' => 'ama', 'MSTRG.1521' => 'ama', 'MSTRG.15884' => 'ama', 'MSTRG.16242' => 'ama', 'MSTRG.22285' => 'ama', 'MSTRG.22444' => 'ama', 'MSTRG.2349' => 'ama', 'MSTRG.26308' => 'ama', 'MSTRG.28296' => 'ama', 'MSTRG.9895' => 'ama', 'Nitab4.5_0000110g0060' => 'nta', 'Nitab4.5_0000420g0130' => 'nta', 'Nitab4.5_0000422g0030' => 'nta', 'Nitab4.5_0000560g0180' => 'nta', 'Nitab4.5_0000703g0100' => 'nta', 'Nitab4.5_0000786g0200' => 'nta', 'Nitab4.5_0001336g0020' => 'nta', 'Nitab4.5_0001796g0030' => 'nta', 'Nitab4.5_0003348g0060' => 'nta', 'Nitab4.5_0003698g0040' => 'nta', 'Nitab4.5_0003942g0090' => 'nta', 'Nitab4.5_0004775g0070' => 'nta', 'Nitab4.5_0004864g0030' => 'nta', 'Nitab4.5_0005615g0020' => 'nta', 'Nitab4.5_0009288g0030' => 'nta', 'Nitab4.5_0009341g0010' => 'nta', 'Nitab4.5_0009535g0010' => 'nta', 'Nn1g03995' => 'nnu', 'Nn1g04100' => 'nnu', 'Nn1g06530' => 'nnu', 'Nn3g16404' => 'nnu', 'Nn3g17212' => 'nnu', 'Nn3g20776' => 'nnu', 'Nn3g21923' => 'nnu', 'Nn5g27737' => 'nnu', 'Nn5g29461' => 'nnu', 'Nn7g38355' => 'nnu', 'Nn8g39873' => 'nnu', 'Oeu000548.2' => 'oeu', 'Oeu004672.1' => 'oeu', 'Oeu015605.2' => 'oeu', 'Oeu016092.1' => 'oeu', 'Oeu017879.3' => 'oeu', 'Oeu024910.1' => 'oeu', 'Oeu028965.1' => 'oeu', 'Oeu031269.1' => 'oeu', 'Oeu031270.1' => 'oeu', 'Oeu032535.1' => 'oeu', 'Oeu034151.1' => 'oeu', 'Oeu034152.1' => 'oeu', 'Oeu034588.2' => 'oeu', 'Oeu050846.1' => 'oeu', 'Oeu050849.2' => 'oeu', 'Oeu051063.2' => 'oeu', 'Oeu052368.1' => 'oeu', 'Oeu052370.1' => 'oeu', 'Os01g0210400' => 'osa', 'Os01g0304300' => 'osa', 'Os01g0749100' => 'osa', 'Os02g0745800' => 'osa', 'Os03g0769050' => 'osa', 'Os05g0531500' => 'osa', 'Os06g0724300' => 'osa', 'Os11g0198100' => 'osa', 'Peaxi162Scf00069g01425' => 'pax', 'Peaxi162Scf00280g00811' => 'pax', 'Peaxi162Scf00310g00615' => 'pax', 'Peaxi162Scf00362g00542' => 'pax', 'Peaxi162Scf00461g00310' => 'pax', 'Peaxi162Scf00530g00118' => 'pax', 'Peaxi162Scf00541g00057' => 'pax', 'Peaxi162Scf00661g00017' => 'pax', 'Peaxi162Scf00926g00027' => 'pax', 'Peaxi162Scf01064g00263' => 'pax', 'Peaxi162Scf01211g00135' => 'pax', 'PGR004G2336' => 'pgr', 'PGR042G0327' => 'pgr', 'PGR042G1957' => 'pgr', 'PGR042G2003' => 'pgr', 'PGR042G3929' => 'pgr', 'PGR083G1137' => 'pgr', 'PGR083G1364' => 'pgr', 'PGSC0003DMG400003381' => 'stu', 'PGSC0003DMG400003417' => 'stu', 'PGSC0003DMG400008981' => 'stu', 'PGSC0003DMG400012417' => 'stu', 'PGSC0003DMG400012823' => 'stu', 'PGSC0003DMG400016885' => 'stu', 'PGSC0003DMG400022812' => 'stu', 'PGSC0003DMG400029726' => 'stu', 'PGSC0003DMG401009243' => 'stu', 'PGSC0003DMG401031505' => 'stu', 'PGSC0003DMG402031505' => 'stu', 'Phvul.001G017600' => 'pvu', 'Phvul.002G193500' => 'pvu', 'Phvul.002G228900' => 'pvu', 'Phvul.002G236800' => 'pvu', 'Phvul.003G049500' => 'pvu', 'Phvul.005G072000' => 'pvu', 'Phvul.006G164800' => 'pvu', 'Phvul.006G185100' => 'pvu', 'Phvul.007G090000' => 'pvu', 'Potri.001G399800' => 'ptr', 'Potri.002G149900' => 'ptr', 'Potri.004G044100' => 'ptr', 'Potri.004G177600' => 'ptr', 'Potri.009G138000' => 'ptr', 'Potri.010G094000' => 'ptr', 'Potri.011G053000' => 'ptr', 'Potri.011G119300' => 'ptr', 'Potri.013G113700' => 'ptr', 'Potri.018G107800' => 'ptr', 'Potri.019G084100' => 'ptr', 'Pp3c14_23720' => 'ppa', 'Pp3c16_6340' => 'ppa', 'Pp3c23_13420' => 'ppa', 'Pp3c24_2740' => 'ppa', 'Pp3c25_860' => 'ppa', 'Pp3c8_21750' => 'ppa', 'Prupe.1G273000' => 'ppe', 'Prupe.1G273700' => 'ppe', 'Prupe.1G274100' => 'ppe', 'Prupe.2G023300' => 'ppe', 'Prupe.4G048000' => 'ppe', 'Prupe.4G080400' => 'ppe', 'Prupe.4G181200' => 'ppe', 'Prupe.8G056900' => 'ppe', 'Prupe.8G168700' => 'ppe', 'Psat1g189080' => 'psa', 'Psat1g204760' => 'psa', 'Psat4g175560' => 'psa', 'Psat4g177720' => 'psa', 'Psat5g244240' => 'psa', 'Psat6g010720' => 'psa', 'Psat6g187200' => 'psa', 'Psat7g072040' => 'psa', 'PSO017G3501' => 'pso', 'PSO063G2148' => 'pso', 'PSO063G5608' => 'pso', 'PSO210G6392' => 'pso', 'PSO541G2319' => 'pso', 'PSO541G2836' => 'pso', 'PSO541G4012' => 'pso', 'PSO541G6253' => 'pso', 'PSO675G0580' => 'pso', 'PSO675G0856' => 'pso', 'PSO675G5635' => 'pso', 'PSO675G9157' => 'pso', 'PSO832G1660' => 'pso', 'PSO832G1969' => 'pso', 'QL02p007186' => 'qlo', 'QL02p033904' => 'qlo', 'QL03p064391' => 'qlo', 'QL05p040593' => 'qlo', 'QL05p058242' => 'qlo', 'QL08p021825' => 'qlo', 'QL11p004981' => 'qlo', 'RcHm_v2.0_Chr1g0318301' => 'rch', 'RcHm_v2.0_Chr4g0418501' => 'rch', 'RcHm_v2.0_Chr4g0439971' => 'rch', 'RcHm_v2.0_Chr5g0008541' => 'rch', 'RcHm_v2.0_Chr5g0014101' => 'rch', 'RcHm_v2.0_Chr5g0014131' => 'rch', 'RcHm_v2.0_Chr5g0033621' => 'rch', 'RcHm_v2.0_Chr6g0272041' => 'rch', 'RcHm_v2.0_Chr6g0278831' => 'rch', 'Rhsim02G0130400' => 'rsi', 'Rhsim02G0171100' => 'rsi', 'Rhsim05G0053000' => 'rsi', 'Rhsim05G0053100' => 'rsi', 'Rhsim06G0096500' => 'rsi', 'Rhsim06G0096600' => 'rsi', 'Rhsim06G0199100' => 'rsi', 'Rhsim12G0062300' => 'rsi', 'Rhsim12G0062800' => 'rsi', 'Sabra02G0118600' => 'sbr', 'Sabra04G0027300' => 'sbr', 'Sabra04G0119500' => 'sbr', 'Sabra08G0112500' => 'sbr', 'Sabra11G0036800' => 'sbr', 'Sabra11G0103800' => 'sbr', 'Sabra13G0096300' => 'sbr', 'Sabra16G0262300' => 'sbr', 'Sabra18G0091700' => 'sbr', 'Sabra19G0095400' => 'sbr', 'SalBow6G3080' => 'sbo', 'SalBow7G1157' => 'sbo', 'SalBow7G2123' => 'sbo', 'SalBow7G2285' => 'sbo', 'SalBow7G3537' => 'sbo', 'SalBow8G2947' => 'sbo', 'SalBow8G4463' => 'sbo', 'SalBow8G5466' => 'sbo', 'Sc01g0001750' => 'sci', 'Sc02g0006640' => 'sci', 'Sc02g0006670' => 'sci', 'Sc04g0008220' => 'sci', 'Sc05g0006190' => 'sci', 'Sc08g0002760' => 'sci', 'Sc17g0006170' => 'sci', 'Sc22g0002050' => 'sci', 'Sc23g0001190' => 'sci', 'Sc24g0000980' => 'sci', 'Sed0006245' => 'sed', 'Sed0007543' => 'sed', 'Sed0009411' => 'sed', 'Sed0010765' => 'sed', 'Sed0012944' => 'sed', 'Sed0014682' => 'sed', 'Sed0016174' => 'sed', 'Sed0016796' => 'sed', 'Sed0020317' => 'sed', 'Sed0021467' => 'sed', 'SEGI_01316' => 'sgi', 'SEGI_03374' => 'sgi', 'SEGI_16265' => 'sgi', 'SEGI_18569' => 'sgi', 'SEGI_20351' => 'sgi', 'SEGI_26395' => 'sgi', 'SEGI_29469' => 'sgi', 'SEGI_34771' => 'sgi', 'SEGI_36769' => 'sgi', 'SEGI_37139' => 'sgi', 'SGA_v2.0_scaffold100G29687' => 'sas', 'SGA_v2.0_scaffold118G32472' => 'sas', 'SGA_v2.0_scaffold14G07051' => 'sas', 'SGA_v2.0_scaffold183G39845' => 'sas', 'SGA_v2.0_scaffold1G00174' => 'sas', 'SGA_v2.0_scaffold22G09714' => 'sas', 'SGA_v2.0_scaffold333G48992' => 'sas', 'SGA_v2.0_scaffold46G17491' => 'sas', 'SGA_v2.0_scaffold49G18294' => 'sas', 'SGA_v2.0_scaffold63G21658' => 'sas', 'SHI01741' => 'shi', 'SHI05771' => 'shi', 'SHI18077' => 'shi', 'SHI20525' => 'shi', 'SHI20527' => 'shi', 'SHI20528' => 'shi', 'SMO172G0185' => 'smo', 'SMO198G0020' => 'smo', 'SMO351G0006' => 'smo', 'SMO356G0118' => 'smo', 'SMO358G0296' => 'smo', 'SMO367G0079' => 'smo', 'SMO367G1277' => 'smo', 'Solyc01g014220.3' => 'sly', 'Solyc01g111770.2' => 'sly', 'Solyc02g078180.3' => 'sly', 'Solyc03g006430.3' => 'sly', 'Solyc03g006456.1' => 'sly', 'Solyc03g079860.2' => 'sly', 'Solyc04g079770.3' => 'sly', 'Solyc05g007430.4' => 'sly', 'Solyc07g063150.3' => 'sly', 'Solyc08g016620.3' => 'sly', 'Solyc09g057590.3' => 'sly', 'Solyc09g057600.1' => 'sly', 'Solyc10g009050.3' => 'sly', 'Solyc11g017420.2' => 'sly', 'Sopen01g053810' => 'spe', 'Sopen02g023040' => 'spe', 'Sopen03g002440' => 'spe', 'Sopen04g033350' => 'spe', 'Sopen05g003310' => 'spe', 'Sopen07g004050' => 'spe', 'Sopen07g031340' => 'spe', 'Sopen08g006990' => 'spe', 'Sopen10g004830' => 'spe', 'Sopen11g009370' => 'spe', 'Sp1g24450' => 'spa', 'Sp1g29670' => 'spa', 'Sp1g39600' => 'spa', 'Sp2g11080' => 'spa', 'Sp2g13970' => 'spa', 'Sp4g16130' => 'spa', 'Sp6g13080' => 'spa', 'Sp7g37270' => 'spa', 'TAR371G0065' => 'tar', 'TAR376G0340' => 'tar', 'TAR376G0435' => 'tar', 'TAR381G0002' => 'tar', 'TAR381G1236' => 'tar', 'TAR624G0055' => 'tar', 'TAR624G0324' => 'tar', 'TAR624G0696' => 'tar', 'TAR624G0906' => 'tar', 'TAR625G0107' => 'tar', 'TAR626G0015' => 'tar', 'TAR626G1356' => 'tar', 'TAR627G0888' => 'tar', 'TAR628G0399' => 'tar', 'TAR628G1327' => 'tar', 'TAR629G2831' => 'tar', 'TAR629G2874' => 'tar', 'TAR633G1432' => 'tar', 'TAR633G2771' => 'tar', 'THA.LOC104803394' => 'tha', 'THA.LOC104805153' => 'tha', 'THA.LOC104806784' => 'tha', 'THA.LOC104810473' => 'tha', 'THA.LOC104813100' => 'tha', 'THA.LOC104814215' => 'tha', 'THA.LOC104815554' => 'tha', 'THA.LOC104820544' => 'tha', 'THA.LOC104824754' => 'tha', 'THA.LOC104827717' => 'tha', 'Thecc.02G031400' => 'tca', 'Thecc.02G055900' => 'tca', 'Thecc.02G350800' => 'tca', 'Thecc.06G150900' => 'tca', 'Thecc.06G186600' => 'tca', 'Thecc.07G089600' => 'tca', 'Thecc.08G020400' => 'tca', 'Thecc.08G182100' => 'tca', 'Thhalv10000873m.g' => 'esa', 'Thhalv10004185m.g' => 'esa', 'Thhalv10006981m.g' => 'esa', 'Thhalv10007204m.g' => 'esa', 'Thhalv10011374m.g' => 'esa', 'Thhalv10013482m.g' => 'esa', 'Thhalv10017801m.g' => 'esa', 'Thhalv10024983m.g' => 'esa', 'TPR.G12072' => 'tpr', 'TPR.G15769' => 'tpr', 'TPR.G16504' => 'tpr', 'TPR.G16506' => 'tpr', 'TPR.G24345' => 'tpr', 'TPR.G26666' => 'tpr', 'TPR.G27320' => 'tpr', 'TPR.G31819' => 'tpr', 'TPR.G38879' => 'tpr', 'TPR.G39015' => 'tpr', 'TPR.G8819' => 'tpr', 'TWI09G0924' => 'twi', 'TWI12G0811' => 'twi', 'TWI12G1294' => 'twi', 'TWI31G0150' => 'twi', 'TWI36G1262' => 'twi', 'TWI38G1287' => 'twi', 'TWI38G1633' => 'twi', 'TWI38G1982' => 'twi', 'TWI39G0116' => 'twi', 'TWI60G1011' => 'twi', 'TWI63G0171' => 'twi', 'TWI73G0839' => 'twi', 'TWI79G1511' => 'twi', 'unitig_0.g915' => 'ugi', 'unitig_0.g916' => 'ugi', 'unitig_21.g20219' => 'ugi', 'unitig_21.g20416' => 'ugi', 'unitig_578.g16132' => 'ugi', 'unitig_578.g16718' => 'ugi', 'unitig_62.g23481' => 'ugi', 'unitig_744.g24535' => 'ugi', 'unitig_749.g13525' => 'ugi', 'vmacro01248' => 'vma', 'vmacro02290' => 'vma', 'vmacro10946' => 'vma', 'vmacro11865' => 'vma', 'vmacro12493' => 'vma', 'vmacro17322' => 'vma', 'vmacro21599' => 'vma', 'vmacro23041' => 'vma', 'VMungo0251G0004' => 'vmu', 'VMungo0251G2639' => 'vmu', 'VMungo0251G2967' => 'vmu', 'VMungo0540G0864' => 'vmu', 'VMungo0540G1569' => 'vmu', 'VMungo0647G0317' => 'vmu', 'VMungo0720G1373' => 'vmu', 'VMungo0720G1508' => 'vmu', 'VMungo1080G0485' => 'vmu', 'VMungo1215G3177' => 'vmu', 'Zm00001eb112600' => 'zma', 'Zm00001eb120220' => 'zma', 'Zm00001eb153240' => 'zma', 'Zm00001eb168880' => 'zma', 'Zm00001eb213920' => 'zma', 'Zm00001eb228280' => 'zma', 'Zm00001eb254580' => 'zma', 'Zm00001eb272180' => 'zma', 'Zm00001eb293190' => 'zma', 'Zm00001eb322930' => 'zma', 'Zm00001eb353360' => 'zma', 'Zm00001eb353390' => 'zma', 'Zm00001eb353430' => 'zma', 'Zm00001eb353440' => 'zma', 'Zm00001eb353780' => 'zma' ) $gf_id = 'HOM05D000499' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000499' ) $data_identifier = 'HOM05D000499' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 29, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 12, 'amhyb' => (int) 8, 'aly' => (int) 12, 'aox' => (int) 9, 'arhy' => (int) 26, 'ath' => (int) 8, 'atr' => (int) 7, 'acertr' => (int) 10, 'cqu' => (int) 15, 'bca' => (int) 29, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 11, 'cansat' => (int) 8, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 9, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 8, 'cpa' => (int) 10, 'csa' => (int) 7, 'camsi' => (int) 20, 'dca' => (int) 8, 'din' => (int) 12, 'dzi' => (int) 14, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 6, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 38, 'gra' => (int) 16, 'vvi' => (int) 8, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 5, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 11, 'lja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 11, 'mpo' => (int) 3, 'mbi' => (int) 14, 'mdo' => (int) 14, 'mtr' => (int) 8, 'cme' => (int) 9, 'egut' => (int) 9, 'ama' => (int) 11, 'nta' => (int) 17, 'nnu' => (int) 11, 'oeu' => (int) 18, 'osa' => (int) 8, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 6, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 9, 'rsi' => (int) 9, 'sbr' => (int) 10, 'sbo' => (int) 8, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 10, 'sas' => (int) 10, 'shi' => (int) 6, 'smo' => (int) 7, 'sly' => (int) 14, 'spe' => (int) 10, 'spa' => (int) 8, 'tar' => (int) 19, 'tha' => (int) 10, 'tca' => (int) 8, 'esa' => (int) 8, 'tpr' => (int) 11, 'twi' => (int) 13, 'ugi' => (int) 9, 'vma' => (int) 8, 'vmu' => (int) 10, 'zma' => (int) 15 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb353780' $species_info = array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ) $local_species = 'dca' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000499', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1066', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p29780' => 'bna', 'A02p33180' => 'bna', 'A03p16470' => 'bna', 'A03p66010' => 'bna', 'A04p25970' => 'bna', 'A06p01270' => 'bna', 'A06p46080' => 'bna', 'A07p11400' => 'bna', 'A08p01840' => 'bna', 'A08p08230' => 'bna', 'A08p25740' => 'bna', 'A09p32070' => 'bna', 'A09p37830' => 'bna', 'A09p42840' => 'bna', 'A09p42850' => 'bna', 'Aa31LG10G2060' => 'aar', 'Aa31LG2G7410' => 'aar', 'Aa31LG6G10200' => 'aar', 'Aa31LG6G16680' => 'aar', 'Aa31LG6G8470' => 'aar', 'Aa31LG9G12730' => 'aar', 'Aa31LG9G13680' => 'aar', 'Aa31LG9G14920' => 'aar', 'Aa31LG9G6650' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4977' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5467' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3254' => 'aag', 'Actinidia02578' => 'ach', 'Actinidia07693' => 'ach', 'Actinidia08413' => 'ach', 'Actinidia08414' => 'ach', 'Actinidia15289' => 'ach', 'Actinidia19871' => 'ach', 'Actinidia21475' => 'ach', 'Actinidia22576' => 'ach', 'Actinidia28327' => 'ach', 'Actinidia32491' => 'ach', 'Actinidia39463' => 'ach', 'Actinidia39571' => 'ach', 'Ah.01g013750' => 'amhyb', 'Ah.01g023210' => 'amhyb', 'Ah.04g164850' => 'amhyb', 'Ah.05g178060' => 'amhyb', 'Ah.07g204270' => 'amhyb', 'Ah.07g208480' => 'amhyb', 'Ah.09g237410' => 'amhyb', 'Ah.14g089460' => 'amhyb', 'AL1G41790' => 'aly', 'AL1G49050' => 'aly', 'AL1G53810' => 'aly', 'AL1G61400' => 'aly', 'AL4G18580' => 'aly', 'AL5G12510' => 'aly', 'AL5G12540' => 'aly', 'AL6G43230' => 'aly', 'AL7G10370' => 'aly', 'AL7G19250' => 'aly', 'AL8G12240' => 'aly', 'AL8G18540' => 'aly', 'Aqoxy1G02409' => 'aox', 'Aqoxy2G03993' => 'aox', 'Aqoxy3G03357' => 'aox', 'Aqoxy4G00785' => 'aox', 'Aqoxy5G02598' => 'aox', 'Aqoxy6G00132' => 'aox', 'Aqoxy7G01776' => 'aox', 'Aqoxy7G02316' => 'aox', 'Aqoxy7G03973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.12AFKW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B8730' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27IQR1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3F75VG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3RE0GA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41TCQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.527VTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FIR39' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5W8UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DA38EV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ63HS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H1I32C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HC27T5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4M8AP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7N3CZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9UVDZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LS1NQA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT1D4B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SKC4TM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCFV76' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF9Q1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQWD9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1ZM88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WE07RT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YCK7VH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJE6Q6' => 'arhy', 'AT1G28240' => 'ath', 'AT1G34550' => 'ath', 'AT1G53040' => 'ath', 'AT2G02910' => 'ath', 'AT4G09630' => 'ath', 'AT4G38500' => 'ath', 'AT5G42660' => 'ath', 'AT5G46220' => 'ath', 'ATR0152G026' => 'atr', 'ATR0564G343' => 'atr', 'ATR0706G151' => 'atr', 'ATR0733G207' => 'atr', 'ATR0751G234' => 'atr', 'ATR0807G048' => 'atr', 'ATR1091G084' => 'atr', 'Atru.chr10.1229' => 'acertr', 'Atru.chr10.1230' => 'acertr', 'Atru.chr10.1874' => 'acertr', 'Atru.chr11.1808' => 'acertr', 'Atru.chr13.1795' => 'acertr', 'Atru.chr13.570' => 'acertr', 'Atru.chr2.2608' => 'acertr', 'Atru.chr2.2609' => 'acertr', 'Atru.chr5.3428' => 'acertr', 'Atru.chr8.1171' => 'acertr', 'AUR62004651' => 'cqu', 'AUR62008675' => 'cqu', 'AUR62010014' => 'cqu', 'AUR62013004' => 'cqu', 'AUR62014825' => 'cqu', 'AUR62015015' => 'cqu', 'AUR62015151' => 'cqu', 'AUR62017020' => 'cqu', 'AUR62019422' => 'cqu', 'AUR62023570' => 'cqu', 'AUR62025571' => 'cqu', 'AUR62029098' => 'cqu', 'AUR62033863' => 'cqu', 'AUR62034296' => 'cqu', 'AUR62040075' => 'cqu', 'BcaB02g07334' => 'bca', 'BcaB02g10575' => 'bca', 'BcaB03g12119' => 'bca', 'BcaB03g12120' => 'bca', 'BcaB03g13945' => 'bca', 'BcaB04g17123' => 'bca', 'BcaB04g17867' => 'bca', 'BcaB04g19839' => 'bca', 'BcaB07g30317' => 'bca', 'BcaB07g32432' => 'bca', 'BcaB07g33362' => 'bca', 'BcaB08g36611' => 'bca', 'BcaC01g00028' => 'bca', 'BcaC01g01356' => 'bca', 'BcaC01g02034' => 'bca', 'BcaC01g06051' => 'bca', 'BcaC03g16839' => 'bca', 'BcaC03g17176' => 'bca', 'BcaC05g26829' => 'bca', 'BcaC06g31490' => 'bca', 'BcaC06g35344' => 'bca', 'BcaC06g36570' => 'bca', 'BcaC07g37537' => 'bca', 'BcaC08g43491' => 'bca', 'BcaC08g43773' => 'bca', 'BcaNung00234' => 'bca', 'BcaNung01982' => 'bca', 'BcaNung03707' => 'bca', 'BcaNung06454' => 'bca', 'BolC2t10762H' => 'bol', 'BolC2t11191H' => 'bol', 'BolC3t14322H' => 'bol', 'BolC3t19747H' => 'bol', 'BolC3t21425H' => 'bol', 'BolC4t27800H' => 'bol', 'BolC5t31423H' => 'bol', 'BolC6t35951H' => 'bol', 'BolC6t36282H' => 'bol', 'BolC7t40678H' => 'bol', 'BolC7t40679H' => 'bol', 'BolC7t42222H' => 'bol', 'BolC7t43492H' => 'bol', 'BolC7t46785H' => 'bol', 'BolC8t47853H' => 'bol', 'BolC9t56805H' => 'bol', 'BraA02t08000Z' => 'bra', 'BraA02t08341Z' => 'bra', 'BraA03t10936Z' => 'bra', 'BraA03t15657Z' => 'bra', 'BraA04t18100Z' => 'bra', 'BraA05t20523Z' => 'bra', 'BraA06t23353Z' => 'bra', 'BraA06t27473Z' => 'bra', 'BraA06t27769Z' => 'bra', 'BraA07t28928Z' => 'bra', 'BraA08t32236Z' => 'bra', 'BraA08t32841Z' => 'bra', 'BraA08t34524Z' => 'bra', 'BraA09t38742Z' => 'bra', 'BraA09t39295Z' => 'bra', 'C02p47180' => 'bna', 'C02p50990' => 'bna', 'C03p19360' => 'bna', 'C03p74950' => 'bna', 'C03p91000' => 'bna', 'C04p63260' => 'bna', 'C05p27050' => 'bna', 'C06p08750' => 'bna', 'C06p11490' => 'bna', 'C07p02820' => 'bna', 'C07p17180' => 'bna', 'C07p29440' => 'bna', 'C07p63730' => 'bna', 'C09p39260' => 'bna', 'CAN.G1164.34' => 'can', 'CAN.G1164.39' => 'can', 'CAN.G1530.3' => 'can', 'CAN.G162.61' => 'can', 'CAN.G176.6' => 'can', 'CAN.G289.49' => 'can', 'CAN.G370.21' => 'can', 'CAN.G370.22' => 'can', 'CAN.G371.117' => 'can', 'CAN.G58.37' => 'can', 'CAN.G588.98' => 'can', 'CANSAT21G2266' => 'cansat', 'CANSAT25G2799' => 'cansat', 'CANSAT35G0862' => 'cansat', 'CANSAT35G1704' => 'cansat', 'CANSAT35G1760' => 'cansat', 'CANSAT56G3971' => 'cansat', 'CANSAT56G4116' => 'cansat', 'CANSAT80G1259' => 'cansat', 'CARHR027730' => 'chi', 'CARHR033880' => 'chi', 'CARHR043270' => 'chi', 'CARHR145330' => 'chi', 'CARHR145340' => 'chi', 'CARHR175570' => 'chi', 'CARHR181570' => 'chi', 'CARHR258470' => 'chi', 'CARHR260490' => 'chi', 'CARHR294220' => 'chi', 'Carub.0001s2668' => 'cru', 'Carub.0001s3257' => 'cru', 'Carub.0001s4220' => 'cru', 'Carub.0005s0179' => 'cru', 'Carub.0006s2807' => 'cru', 'Carub.0007s0039' => 'cru', 'Carub.0008s0169' => 'cru', 'Carub.0008s0636' => 'cru', 'Ca_00338_v3' => 'car', 'Ca_00542_v3' => 'car', 'Ca_01844_v3' => 'car', 'Ca_10611_v3' => 'car', 'Ca_13326_v3' => 'car', 'Ca_17944_v3' => 'car', 'Ca_18546_v3' => 'car', 'Ca_24219_v3' => 'car', 'Ca_29972_v3' => 'car', 'CBR_g3681' => 'cbr', 'CBR_g40021' => 'cbr', 'Cc01_g08140' => 'ccan', 'Cc02_g13410' => 'ccan', 'Cc02_g37480' => 'ccan', 'Cc05_g12030' => 'ccan', 'Cc09_g03370' => 'ccan', 'Cc09_g10300' => 'ccan', 'Cc10_g03530' => 'ccan', 'Cc10_g11380' => 'ccan', 'CDE01G0176' => 'cde', 'CDE02G0675' => 'cde', 'CDE02G0942' => 'cde', 'CDE02G1153' => 'cde', 'CDE02G4177' => 'cde', 'CDE04G2117' => 'cde', 'CDE04G2736' => 'cde', 'CDE08G1161' => 'cde', 'CDE09G1238' => 'cde', 'Cfa000467' => 'cfa', 'Cfa000947' => 'cfa', 'Cfa004969' => 'cfa', 'Cfa005284' => 'cfa', 'Cfa008993' => 'cfa', 'Cfa018187' => 'cfa', 'Cfa018454' => 'cfa', 'Cfa020585' => 'cfa', 'Ciclev10000424m.g' => 'ccl', 'Ciclev10003605m.g' => 'ccl', 'Ciclev10007828m.g' => 'ccl', 'Ciclev10014620m.g' => 'ccl', 'Ciclev10015169m.g' => 'ccl', 'Ciclev10018291m.g' => 'ccl', 'Ciclev10028256m.g' => 'ccl', 'Ciclev10033822m.g' => 'ccl', 'CiPaw.05G060300' => 'cil', 'CiPaw.05G085000' => 'cil', 'CiPaw.06G083700' => 'cil', 'CiPaw.06G120300' => 'cil', 'CiPaw.09G060500' => 'cil', 'CiPaw.09G123800' => 'cil', 'CiPaw.11G169700' => 'cil', 'CiPaw.12G118300' => 'cil', 'CiPaw.15G071000' => 'cil', 'CiPaw.15G081900' => 'cil', 'ClCG01G024610' => 'cla', 'ClCG03G006070' => 'cla', 'ClCG05G019250' => 'cla', 'ClCG09G009500' => 'cla', 'ClCG11G008200' => 'cla', 'ClCG11G018080' => 'cla', 'COL.COLO4_17373' => 'col', 'COL.COLO4_22994' => 'col', 'COL.COLO4_26389' => 'col', 'COL.COLO4_27170' => 'col', 'COL.COLO4_31074' => 'col', 'COL.COLO4_31465' => 'col', 'COL.COLO4_36438' => 'col', 'COL.COLO4_36439' => 'col', 'Cpa.g.c38781' => 'cpa', 'Cpa.g.sc128.12' => 'cpa', 'Cpa.g.sc166.7' => 'cpa', 'Cpa.g.sc166.8' => 'cpa', 'Cpa.g.sc20.111' => 'cpa', 'Cpa.g.sc27.31' => 'cpa', 'Cpa.g.sc64.36' => 'cpa', 'Cpa.g.sc64.37' => 'cpa', 'Cpa.g.sc66.49' => 'cpa', 'Cpa.g.sc80.64' => 'cpa', 'CsaV3_1G012320' => 'csa', 'CsaV3_2G008480' => 'csa', 'CsaV3_2G033450' => 'csa', 'CsaV3_3G044830' => 'csa', 'CsaV3_4G033710' => 'csa', 'CsaV3_6G051730' => 'csa', 'CsaV3_7G025350' => 'csa', 'CSS0001067' => 'camsi', 'CSS0005996' => 'camsi', 'CSS0006590' => 'camsi', 'CSS0009673' => 'camsi', 'CSS0010201' => 'camsi', 'CSS0010549' => 'camsi', 'CSS0011364' => 'camsi', 'CSS0014473' => 'camsi', 'CSS0014961' => 'camsi', 'CSS0020191' => 'camsi', 'CSS0021165' => 'camsi', 'CSS0022306' => 'camsi', 'CSS0030591' => 'camsi', 'CSS0030696' => 'camsi', 'CSS0032653' => 'camsi', 'CSS0037487' => 'camsi', 'CSS0041102' => 'camsi', 'CSS0041261' => 'camsi', 'CSS0046246' => 'camsi', 'CSS0049256' => 'camsi', 'DCAR_004075' => 'dca', 'DCAR_011538' => 'dca', 'DCAR_019553' => 'dca', 'DCAR_020952' => 'dca', 'DCAR_021739' => 'dca', 'DCAR_027407' => 'dca', 'DCAR_027913' => 'dca', 'DCAR_028066' => 'dca', 'Dinv05899' => 'din', 'Dinv07563' => 'din', 'Dinv08010' => 'din', 'Dinv14125' => 'din', 'Dinv20172' => 'din', 'Dinv30743' => 'din', 'Dinv31229' => 'din', 'Dinv34162' => 'din', 'Dinv36028' => 'din', 'Dinv39368' => 'din', 'Dinv40565' => 'din', 'Dinv41706' => 'din', 'Duzib052G0089' => 'dzi', 'Duzib116G0641' => 'dzi', 'Duzib132G0069' => 'dzi', 'Duzib132G1219' => 'dzi', 'Duzib147G0278' => 'dzi', 'Duzib160G0480' => 'dzi', 'Duzib170G0661' => 'dzi', 'Duzib177G0591' => 'dzi', 'Duzib187G1353' => 'dzi', 'Duzib192G0858' => 'dzi', 'Duzib192G0883' => 'dzi', 'Duzib213G0506' => 'dzi', 'Duzib235G0289' => 'dzi', 'Duzib251G0422' => 'dzi', 'ECA232G3898' => 'eca', 'ECA233G5950' => 'eca', 'ECA234G1699' => 'eca', 'ECA234G2421' => 'eca', 'ECA236G0426' => 'eca', 'ECA236G4331' => 'eca', 'ECA248G2573' => 'eca', 'EL10Ac1g00077' => 'bvu', 'EL10Ac1g01746' => 'bvu', 'EL10Ac2g03464' => 'bvu', 'EL10Ac4g08176' => 'bvu', 'EL10Ac7g17521' => 'bvu', 'EL10Ac8g20386' => 'bvu', 'EL10Ac9g21343' => 'bvu', 'EL10Ac9g22688' => 'bvu', 'Eucgr.B03434' => 'egr', 'Eucgr.D00618' => 'egr', 'Eucgr.E02395' => 'egr', 'Eucgr.F01129' => 'egr', 'Eucgr.F02622' => 'egr', 'Eucgr.F04207' => 'egr', 'FAN01G0570' => 'fan', 'FAN03G3351' => 'fan', 'FAN06G3702' => 'fan', 'FAN07G2149' => 'fan', 'FAN10G3758' => 'fan', 'FAN11G1170' => 'fan', 'FAN11G2050' => 'fan', 'FAN11G2724' => 'fan', 'FAN12G1700' => 'fan', 'FAN12G2028' => 'fan', 'FAN15G1160' => 'fan', 'FAN15G3063' => 'fan', 'FAN16G2540' => 'fan', 'FAN16G3077' => 'fan', 'FAN16G3624' => 'fan', 'FAN17G0221' => 'fan', 'FAN20G2492' => 'fan', 'FAN20G2905' => 'fan', 'FAN21G0548' => 'fan', 'FAN21G1300' => 'fan', 'FAN22G0077' => 'fan', 'FAN22G1315' => 'fan', 'FAN24G1280' => 'fan', 'FAN24G1445' => 'fan', 'FAN24G3527' => 'fan', 'FAN25G0464' => 'fan', 'FAN25G2885' => 'fan', 'FAN25G3270' => 'fan', 'FAN27G1101' => 'fan', 'FAN27G2846' => 'fan', 'FAN27G3524' => 'fan', 'FvH4_2g11770' => 'fve', 'FvH4_2g15630' => 'fve', 'FvH4_3g05570' => 'fve', 'FvH4_3g09110' => 'fve', 'FvH4_3g19940' => 'fve', 'FvH4_4g04821' => 'fve', 'FvH4_4g31480' => 'fve', 'FvH4_7g01740' => 'fve', 'Glyma.05G130400' => 'gma', 'Glyma.05G156400' => 'gma', 'Glyma.07G197000' => 'gma', 'Glyma.08G085151' => 'gma', 'Glyma.08G114500' => 'gma', 'Glyma.08G300400' => 'gma', 'Glyma.10G215800' => 'gma', 'Glyma.12G224400' => 'gma', 'Glyma.13G179300' => 'gma', 'Glyma.13G218151' => 'gma', 'Glyma.13G238800' => 'gma', 'Glyma.13G276900' => 'gma', 'Glyma.14G078200' => 'gma', 'Glyma.15G074500' => 'gma', 'Glyma.15G094100' => 'gma', 'Glyma.17G247200' => 'gma', 'Glyma.18G120100' => 'gma', 'Glyma.20G176000' => 'gma', 'Gohir.A01G063600' => 'ghi', 'Gohir.A01G170301' => 'ghi', 'Gohir.A02G060500' => 'ghi', 'Gohir.A05G133850' => 'ghi', 'Gohir.A05G161400' => 'ghi', 'Gohir.A06G012900' => 'ghi', 'Gohir.A06G035901' => 'ghi', 'Gohir.A06G127100' => 'ghi', 'Gohir.A06G210500' => 'ghi', 'Gohir.A08G008650' => 'ghi', 'Gohir.A09G072700' => 'ghi', 'Gohir.A09G088301' => 'ghi', 'Gohir.A10G040600' => 'ghi', 'Gohir.A12G036300' => 'ghi', 'Gohir.A12G143350' => 'ghi', 'Gohir.A12G165500' => 'ghi', 'Gohir.A13G145700' => 'ghi', 'Gohir.D01G050000' => 'ghi', 'Gohir.D01G051366' => 'ghi', 'Gohir.D01G161350' => 'ghi', 'Gohir.D02G065900' => 'ghi', 'Gohir.D05G164200' => 'ghi', 'Gohir.D05G355500' => 'ghi', 'Gohir.D06G010400' => 'ghi', 'Gohir.D06G111250' => 'ghi', 'Gohir.D06G132000' => 'ghi', 'Gohir.D06G210500' => 'ghi', 'Gohir.D07G165675' => 'ghi', 'Gohir.D08G062240' => 'ghi', 'Gohir.D08G086101' => 'ghi', 'Gohir.D08G138060' => 'ghi', 'Gohir.D09G072300' => 'ghi', 'Gohir.D10G041400' => 'ghi', 'Gohir.D11G191020' => 'ghi', 'Gohir.D11G212066' => 'ghi', 'Gohir.D12G036300' => 'ghi', 'Gohir.D12G168600' => 'ghi', 'Gohir.D13G150600' => 'ghi', 'Gorai.001G057300' => 'gra', 'Gorai.002G069900' => 'gra', 'Gorai.002G200000' => 'gra', 'Gorai.003G067600' => 'gra', 'Gorai.005G074800' => 'gra', 'Gorai.006G087300' => 'gra', 'Gorai.008G037500' => 'gra', 'Gorai.008G181400' => 'gra', 'Gorai.009G169400' => 'gra', 'Gorai.009G387900' => 'gra', 'Gorai.010G013300' => 'gra', 'Gorai.010G153800' => 'gra', 'Gorai.010G255800' => 'gra', 'Gorai.011G043700' => 'gra', 'Gorai.011G198900' => 'gra', 'Gorai.013G168400' => 'gra', 'GSVIVG01005212001' => 'vvi', 'GSVIVG01006163001' => 'vvi', 'GSVIVG01009625001' => 'vvi', 'GSVIVG01014338001' => 'vvi', 'GSVIVG01020005001' => 'vvi', 'GSVIVG01021450001' => 'vvi', 'GSVIVG01023975001' => 'vvi', 'GSVIVG01034490001' => 'vvi', 'HanXRQChr04g0112071' => 'han', 'HanXRQChr05g0131151' => 'han', 'HanXRQChr09g0262371' => 'han', 'HanXRQChr09g0268401' => 'han', 'HanXRQChr10g0279241' => 'han', 'HanXRQChr10g0297961' => 'han', 'HanXRQChr11g0326231' => 'han', 'HanXRQChr11g0328471' => 'han', 'HanXRQChr16g0507941' => 'han', 'HanXRQChr17g0560211' => 'han', 'Haze_02108' => 'cav', 'Haze_02428' => 'cav', 'Haze_05593' => 'cav', 'Haze_06448' => 'cav', 'Haze_09427' => 'cav', 'Haze_12022' => 'cav', 'Haze_17612' => 'cav', 'Haze_17928' => 'cav', 'Hma1.2p1_0032F.1_g019250' => 'hma', 'Hma1.2p1_0163F.1_g072690' => 'hma', 'Hma1.2p1_0265F.1_g106710' => 'hma', 'Hma1.2p1_0286F.1_g113970' => 'hma', 'Hma1.2p1_0363F.1_g136640' => 'hma', 'Hma1.2p1_0584F.1_g183470' => 'hma', 'Hma1.2p1_0885F.1_g232570' => 'hma', 'HPP92_006022' => 'vpl', 'HPP92_007320' => 'vpl', 'HPP92_011521' => 'vpl', 'HPP92_019387' => 'vpl', 'HPP92_024038' => 'vpl', 'Hund05891' => 'sun', 'Hund06450' => 'sun', 'Hund12053' => 'sun', 'Hund16800' => 'sun', 'Hund21222' => 'sun', 'Hund22896' => 'sun', 'Hund23746' => 'sun', 'Hund27083' => 'sun', 'Lalb_Chr02g0141831' => 'lal', 'Lalb_Chr02g0141841' => 'lal', 'Lalb_Chr05g0220411' => 'lal', 'Lalb_Chr06g0162081' => 'lal', 'Lalb_Chr09g0327651' => 'lal', 'Lalb_Chr13g0295051' => 'lal', 'Lalb_Chr15g0086801' => 'lal', 'Lalb_Chr16g0383781' => 'lal', 'Lalb_Chr16g0383791' => 'lal', 'Lalb_Chr18g0055441' => 'lal', 'Lalb_Chr18g0059611' => 'lal', 'Lalb_Chr20g0109661' => 'lal', 'Lalb_Chr20g0109831' => 'lal', 'Lalb_Chr20g0121871' => 'lal', 'Lalb_Chr22g0355361' => 'lal', 'Lalb_Chr25g0286371' => 'lal', 'Lj1A1187G43' => 'lonja', 'Lj1A1205T50' => 'lonja', 'Lj1A800G33' => 'lonja', 'Lj1C1187T7' => 'lonja', 'Lj1C843T11' => 'lonja', 'Lj1g0010940' => 'lja', 'Lj2A288T69' => 'lonja', 'Lj3g0024276' => 'lja', 'Lj4A47T76' => 'lonja', 'Lj4g0005805' => 'lja', 'Lj4g0006097' => 'lja', 'Lj4g0008528' => 'lja', 'Lj4g0024907' => 'lja', 'Lj5g0012472' => 'lja', 'Lj5g0018648' => 'lja', 'Lj6C789G1' => 'lonja', 'Lj6g0004000' => 'lja', 'Lj7A292G67' => 'lonja', 'Lj7A292T64' => 'lonja', 'Lj9A400T58' => 'lonja', 'Lsat_1_v5_gn_1_126181' => 'lsa', 'Lsat_1_v5_gn_4_123041' => 'lsa', 'Lsat_1_v5_gn_4_133620' => 'lsa', 'Lsat_1_v5_gn_4_53221' => 'lsa', 'Lsat_1_v5_gn_4_71961' => 'lsa', 'Lsat_1_v5_gn_7_105241' => 'lsa', 'Lsat_1_v5_gn_7_21361' => 'lsa', 'Lsat_1_v5_gn_7_28860' => 'lsa', 'Lsat_1_v5_gn_7_31260' => 'lsa', 'Lsat_1_v5_gn_8_52801' => 'lsa', 'Manes.02G191400' => 'mes', 'Manes.03G110100' => 'mes', 'Manes.04G071100' => 'mes', 'Manes.05G100500' => 'mes', 'Manes.05G164700' => 'mes', 'Manes.15G087000' => 'mes', 'Manes.15G121500' => 'mes', 'Manes.16G028300' => 'mes', 'Manes.17G046100' => 'mes', 'Manes.17G069800' => 'mes', 'Manes.18G100500' => 'mes', 'Mapoly0002s0109' => 'mpo', 'Mapoly0024s0007' => 'mpo', 'Mapoly0089s0032' => 'mpo', 'MBI04_g42241_MAGBIO' => 'mbi', 'MBI05_g11988_MAGBIO' => 'mbi', 'MBI05_g35452_MAGBIO' => 'mbi', 'MBI07_g30179_MAGBIO' => 'mbi', 'MBI07_g35859_MAGBIO' => 'mbi', 'MBI07_g35860_MAGBIO' => 'mbi', 'MBI07_g37166_MAGBIO' => 'mbi', 'MBI08_g18172_MAGBIO' => 'mbi', 'MBI09_g08441_MAGBIO' => 'mbi', 'MBI13_g01676_MAGBIO' => 'mbi', 'MBI14_g42955_MAGBIO' => 'mbi', 'MBI16_g13161_MAGBIO' => 'mbi', 'MBI17_g27204_MAGBIO' => 'mbi', 'MBI19_g21595_MAGBIO' => 'mbi', 'MD00G1148400' => 'mdo', 'MD02G1301200' => 'mdo', 'MD03G1227800' => 'mdo', 'MD05G1041100' => 'mdo', 'MD05G1124800' => 'mdo', 'MD05G1284000' => 'mdo', 'MD05G1338800' => 'mdo', 'MD05G1338900' => 'mdo', 'MD07G1022800' => 'mdo', 'MD10G1047500' => 'mdo', 'MD10G1127500' => 'mdo', 'MD10G1262300' => 'mdo', 'MD10G1293800' => 'mdo', 'MD16G1074300' => 'mdo', 'Medtr1g021670' => 'mtr', 'Medtr1g096320' => 'mtr', 'Medtr2g013690' => 'mtr', 'Medtr2g019450' => 'mtr', 'Medtr2g085170' => 'mtr', 'Medtr4g088785' => 'mtr', 'Medtr8g055930' => 'mtr', 'Medtr8g085850' => 'mtr', 'MELO3C002605.2' => 'cme', 'MELO3C003891.2' => 'cme', 'MELO3C004012.2' => 'cme', 'MELO3C007134.2' => 'cme', 'MELO3C008118.2' => 'cme', 'MELO3C016700.2' => 'cme', 'MELO3C024127.2' => 'cme', 'MELO3C033361.2' => 'cme', 'MELO3C033362.2' => 'cme', 'Migut.C00430' => 'egut', 'Migut.C01246' => 'egut', 'Migut.E00101' => 'egut', 'Migut.H01486' => 'egut', 'Migut.H01939' => 'egut', 'Migut.K00360' => 'egut', 'Migut.M00910' => 'egut', 'Migut.M01139' => 'egut', 'Migut.N02677' => 'egut', 'MSTRG.13252' => 'ama', 'MSTRG.14701' => 'ama', 'MSTRG.1521' => 'ama', 'MSTRG.15884' => 'ama', 'MSTRG.16242' => 'ama', 'MSTRG.22285' => 'ama', 'MSTRG.22444' => 'ama', 'MSTRG.2349' => 'ama', 'MSTRG.26308' => 'ama', 'MSTRG.28296' => 'ama', 'MSTRG.9895' => 'ama', 'Nitab4.5_0000110g0060' => 'nta', 'Nitab4.5_0000420g0130' => 'nta', 'Nitab4.5_0000422g0030' => 'nta', 'Nitab4.5_0000560g0180' => 'nta', 'Nitab4.5_0000703g0100' => 'nta', 'Nitab4.5_0000786g0200' => 'nta', 'Nitab4.5_0001336g0020' => 'nta', 'Nitab4.5_0001796g0030' => 'nta', 'Nitab4.5_0003348g0060' => 'nta', 'Nitab4.5_0003698g0040' => 'nta', 'Nitab4.5_0003942g0090' => 'nta', 'Nitab4.5_0004775g0070' => 'nta', 'Nitab4.5_0004864g0030' => 'nta', 'Nitab4.5_0005615g0020' => 'nta', 'Nitab4.5_0009288g0030' => 'nta', 'Nitab4.5_0009341g0010' => 'nta', 'Nitab4.5_0009535g0010' => 'nta', 'Nn1g03995' => 'nnu', 'Nn1g04100' => 'nnu', 'Nn1g06530' => 'nnu', 'Nn3g16404' => 'nnu', 'Nn3g17212' => 'nnu', 'Nn3g20776' => 'nnu', 'Nn3g21923' => 'nnu', 'Nn5g27737' => 'nnu', 'Nn5g29461' => 'nnu', 'Nn7g38355' => 'nnu', 'Nn8g39873' => 'nnu', 'Oeu000548.2' => 'oeu', 'Oeu004672.1' => 'oeu', 'Oeu015605.2' => 'oeu', 'Oeu016092.1' => 'oeu', 'Oeu017879.3' => 'oeu', 'Oeu024910.1' => 'oeu', 'Oeu028965.1' => 'oeu', 'Oeu031269.1' => 'oeu', 'Oeu031270.1' => 'oeu', 'Oeu032535.1' => 'oeu', 'Oeu034151.1' => 'oeu', 'Oeu034152.1' => 'oeu', 'Oeu034588.2' => 'oeu', 'Oeu050846.1' => 'oeu', 'Oeu050849.2' => 'oeu', 'Oeu051063.2' => 'oeu', 'Oeu052368.1' => 'oeu', 'Oeu052370.1' => 'oeu', 'Os01g0210400' => 'osa', 'Os01g0304300' => 'osa', 'Os01g0749100' => 'osa', 'Os02g0745800' => 'osa', 'Os03g0769050' => 'osa', 'Os05g0531500' => 'osa', 'Os06g0724300' => 'osa', 'Os11g0198100' => 'osa', 'Peaxi162Scf00069g01425' => 'pax', 'Peaxi162Scf00280g00811' => 'pax', 'Peaxi162Scf00310g00615' => 'pax', 'Peaxi162Scf00362g00542' => 'pax', 'Peaxi162Scf00461g00310' => 'pax', 'Peaxi162Scf00530g00118' => 'pax', 'Peaxi162Scf00541g00057' => 'pax', 'Peaxi162Scf00661g00017' => 'pax', 'Peaxi162Scf00926g00027' => 'pax', 'Peaxi162Scf01064g00263' => 'pax', 'Peaxi162Scf01211g00135' => 'pax', 'PGR004G2336' => 'pgr', 'PGR042G0327' => 'pgr', 'PGR042G1957' => 'pgr', 'PGR042G2003' => 'pgr', 'PGR042G3929' => 'pgr', 'PGR083G1137' => 'pgr', 'PGR083G1364' => 'pgr', 'PGSC0003DMG400003381' => 'stu', 'PGSC0003DMG400003417' => 'stu', 'PGSC0003DMG400008981' => 'stu', 'PGSC0003DMG400012417' => 'stu', 'PGSC0003DMG400012823' => 'stu', 'PGSC0003DMG400016885' => 'stu', 'PGSC0003DMG400022812' => 'stu', 'PGSC0003DMG400029726' => 'stu', 'PGSC0003DMG401009243' => 'stu', 'PGSC0003DMG401031505' => 'stu', 'PGSC0003DMG402031505' => 'stu', 'Phvul.001G017600' => 'pvu', 'Phvul.002G193500' => 'pvu', 'Phvul.002G228900' => 'pvu', 'Phvul.002G236800' => 'pvu', 'Phvul.003G049500' => 'pvu', 'Phvul.005G072000' => 'pvu', 'Phvul.006G164800' => 'pvu', 'Phvul.006G185100' => 'pvu', 'Phvul.007G090000' => 'pvu', 'Potri.001G399800' => 'ptr', 'Potri.002G149900' => 'ptr', 'Potri.004G044100' => 'ptr', 'Potri.004G177600' => 'ptr', 'Potri.009G138000' => 'ptr', 'Potri.010G094000' => 'ptr', 'Potri.011G053000' => 'ptr', 'Potri.011G119300' => 'ptr', 'Potri.013G113700' => 'ptr', 'Potri.018G107800' => 'ptr', 'Potri.019G084100' => 'ptr', 'Pp3c14_23720' => 'ppa', 'Pp3c16_6340' => 'ppa', 'Pp3c23_13420' => 'ppa', 'Pp3c24_2740' => 'ppa', 'Pp3c25_860' => 'ppa', 'Pp3c8_21750' => 'ppa', 'Prupe.1G273000' => 'ppe', 'Prupe.1G273700' => 'ppe', 'Prupe.1G274100' => 'ppe', 'Prupe.2G023300' => 'ppe', 'Prupe.4G048000' => 'ppe', 'Prupe.4G080400' => 'ppe', 'Prupe.4G181200' => 'ppe', 'Prupe.8G056900' => 'ppe', 'Prupe.8G168700' => 'ppe', 'Psat1g189080' => 'psa', 'Psat1g204760' => 'psa', 'Psat4g175560' => 'psa', 'Psat4g177720' => 'psa', 'Psat5g244240' => 'psa', 'Psat6g010720' => 'psa', 'Psat6g187200' => 'psa', 'Psat7g072040' => 'psa', 'PSO017G3501' => 'pso', 'PSO063G2148' => 'pso', 'PSO063G5608' => 'pso', 'PSO210G6392' => 'pso', 'PSO541G2319' => 'pso', 'PSO541G2836' => 'pso', 'PSO541G4012' => 'pso', 'PSO541G6253' => 'pso', 'PSO675G0580' => 'pso', 'PSO675G0856' => 'pso', 'PSO675G5635' => 'pso', 'PSO675G9157' => 'pso', 'PSO832G1660' => 'pso', 'PSO832G1969' => 'pso', 'QL02p007186' => 'qlo', 'QL02p033904' => 'qlo', 'QL03p064391' => 'qlo', 'QL05p040593' => 'qlo', 'QL05p058242' => 'qlo', 'QL08p021825' => 'qlo', 'QL11p004981' => 'qlo', 'RcHm_v2.0_Chr1g0318301' => 'rch', 'RcHm_v2.0_Chr4g0418501' => 'rch', 'RcHm_v2.0_Chr4g0439971' => 'rch', 'RcHm_v2.0_Chr5g0008541' => 'rch', 'RcHm_v2.0_Chr5g0014101' => 'rch', 'RcHm_v2.0_Chr5g0014131' => 'rch', 'RcHm_v2.0_Chr5g0033621' => 'rch', 'RcHm_v2.0_Chr6g0272041' => 'rch', 'RcHm_v2.0_Chr6g0278831' => 'rch', 'Rhsim02G0130400' => 'rsi', 'Rhsim02G0171100' => 'rsi', 'Rhsim05G0053000' => 'rsi', 'Rhsim05G0053100' => 'rsi', 'Rhsim06G0096500' => 'rsi', 'Rhsim06G0096600' => 'rsi', 'Rhsim06G0199100' => 'rsi', 'Rhsim12G0062300' => 'rsi', 'Rhsim12G0062800' => 'rsi', 'Sabra02G0118600' => 'sbr', 'Sabra04G0027300' => 'sbr', 'Sabra04G0119500' => 'sbr', 'Sabra08G0112500' => 'sbr', 'Sabra11G0036800' => 'sbr', 'Sabra11G0103800' => 'sbr', 'Sabra13G0096300' => 'sbr', 'Sabra16G0262300' => 'sbr', 'Sabra18G0091700' => 'sbr', 'Sabra19G0095400' => 'sbr', 'SalBow6G3080' => 'sbo', 'SalBow7G1157' => 'sbo', 'SalBow7G2123' => 'sbo', 'SalBow7G2285' => 'sbo', 'SalBow7G3537' => 'sbo', 'SalBow8G2947' => 'sbo', 'SalBow8G4463' => 'sbo', 'SalBow8G5466' => 'sbo', 'Sc01g0001750' => 'sci', 'Sc02g0006640' => 'sci', 'Sc02g0006670' => 'sci', 'Sc04g0008220' => 'sci', 'Sc05g0006190' => 'sci', 'Sc08g0002760' => 'sci', 'Sc17g0006170' => 'sci', 'Sc22g0002050' => 'sci', 'Sc23g0001190' => 'sci', 'Sc24g0000980' => 'sci', 'Sed0006245' => 'sed', 'Sed0007543' => 'sed', 'Sed0009411' => 'sed', 'Sed0010765' => 'sed', 'Sed0012944' => 'sed', 'Sed0014682' => 'sed', 'Sed0016174' => 'sed', 'Sed0016796' => 'sed', 'Sed0020317' => 'sed', 'Sed0021467' => 'sed', 'SEGI_01316' => 'sgi', 'SEGI_03374' => 'sgi', 'SEGI_16265' => 'sgi', 'SEGI_18569' => 'sgi', 'SEGI_20351' => 'sgi', 'SEGI_26395' => 'sgi', 'SEGI_29469' => 'sgi', 'SEGI_34771' => 'sgi', 'SEGI_36769' => 'sgi', 'SEGI_37139' => 'sgi', 'SGA_v2.0_scaffold100G29687' => 'sas', 'SGA_v2.0_scaffold118G32472' => 'sas', 'SGA_v2.0_scaffold14G07051' => 'sas', 'SGA_v2.0_scaffold183G39845' => 'sas', 'SGA_v2.0_scaffold1G00174' => 'sas', 'SGA_v2.0_scaffold22G09714' => 'sas', 'SGA_v2.0_scaffold333G48992' => 'sas', 'SGA_v2.0_scaffold46G17491' => 'sas', 'SGA_v2.0_scaffold49G18294' => 'sas', 'SGA_v2.0_scaffold63G21658' => 'sas', 'SHI01741' => 'shi', 'SHI05771' => 'shi', 'SHI18077' => 'shi', 'SHI20525' => 'shi', 'SHI20527' => 'shi', 'SHI20528' => 'shi', 'SMO172G0185' => 'smo', 'SMO198G0020' => 'smo', 'SMO351G0006' => 'smo', 'SMO356G0118' => 'smo', 'SMO358G0296' => 'smo', 'SMO367G0079' => 'smo', 'SMO367G1277' => 'smo', 'Solyc01g014220.3' => 'sly', 'Solyc01g111770.2' => 'sly', 'Solyc02g078180.3' => 'sly', 'Solyc03g006430.3' => 'sly', 'Solyc03g006456.1' => 'sly', 'Solyc03g079860.2' => 'sly', 'Solyc04g079770.3' => 'sly', 'Solyc05g007430.4' => 'sly', 'Solyc07g063150.3' => 'sly', 'Solyc08g016620.3' => 'sly', 'Solyc09g057590.3' => 'sly', 'Solyc09g057600.1' => 'sly', 'Solyc10g009050.3' => 'sly', 'Solyc11g017420.2' => 'sly', 'Sopen01g053810' => 'spe', 'Sopen02g023040' => 'spe', 'Sopen03g002440' => 'spe', 'Sopen04g033350' => 'spe', 'Sopen05g003310' => 'spe', 'Sopen07g004050' => 'spe', 'Sopen07g031340' => 'spe', 'Sopen08g006990' => 'spe', 'Sopen10g004830' => 'spe', 'Sopen11g009370' => 'spe', 'Sp1g24450' => 'spa', 'Sp1g29670' => 'spa', 'Sp1g39600' => 'spa', 'Sp2g11080' => 'spa', 'Sp2g13970' => 'spa', 'Sp4g16130' => 'spa', 'Sp6g13080' => 'spa', 'Sp7g37270' => 'spa', 'TAR371G0065' => 'tar', 'TAR376G0340' => 'tar', 'TAR376G0435' => 'tar', 'TAR381G0002' => 'tar', 'TAR381G1236' => 'tar', 'TAR624G0055' => 'tar', 'TAR624G0324' => 'tar', 'TAR624G0696' => 'tar', 'TAR624G0906' => 'tar', 'TAR625G0107' => 'tar', 'TAR626G0015' => 'tar', 'TAR626G1356' => 'tar', 'TAR627G0888' => 'tar', 'TAR628G0399' => 'tar', 'TAR628G1327' => 'tar', 'TAR629G2831' => 'tar', 'TAR629G2874' => 'tar', 'TAR633G1432' => 'tar', 'TAR633G2771' => 'tar', 'THA.LOC104803394' => 'tha', 'THA.LOC104805153' => 'tha', 'THA.LOC104806784' => 'tha', 'THA.LOC104810473' => 'tha', 'THA.LOC104813100' => 'tha', 'THA.LOC104814215' => 'tha', 'THA.LOC104815554' => 'tha', 'THA.LOC104820544' => 'tha', 'THA.LOC104824754' => 'tha', 'THA.LOC104827717' => 'tha', 'Thecc.02G031400' => 'tca', 'Thecc.02G055900' => 'tca', 'Thecc.02G350800' => 'tca', 'Thecc.06G150900' => 'tca', 'Thecc.06G186600' => 'tca', 'Thecc.07G089600' => 'tca', 'Thecc.08G020400' => 'tca', 'Thecc.08G182100' => 'tca', 'Thhalv10000873m.g' => 'esa', 'Thhalv10004185m.g' => 'esa', 'Thhalv10006981m.g' => 'esa', 'Thhalv10007204m.g' => 'esa', 'Thhalv10011374m.g' => 'esa', 'Thhalv10013482m.g' => 'esa', 'Thhalv10017801m.g' => 'esa', 'Thhalv10024983m.g' => 'esa', 'TPR.G12072' => 'tpr', 'TPR.G15769' => 'tpr', 'TPR.G16504' => 'tpr', 'TPR.G16506' => 'tpr', 'TPR.G24345' => 'tpr', 'TPR.G26666' => 'tpr', 'TPR.G27320' => 'tpr', 'TPR.G31819' => 'tpr', 'TPR.G38879' => 'tpr', 'TPR.G39015' => 'tpr', 'TPR.G8819' => 'tpr', 'TWI09G0924' => 'twi', 'TWI12G0811' => 'twi', 'TWI12G1294' => 'twi', 'TWI31G0150' => 'twi', 'TWI36G1262' => 'twi', 'TWI38G1287' => 'twi', 'TWI38G1633' => 'twi', 'TWI38G1982' => 'twi', 'TWI39G0116' => 'twi', 'TWI60G1011' => 'twi', 'TWI63G0171' => 'twi', 'TWI73G0839' => 'twi', 'TWI79G1511' => 'twi', 'unitig_0.g915' => 'ugi', 'unitig_0.g916' => 'ugi', 'unitig_21.g20219' => 'ugi', 'unitig_21.g20416' => 'ugi', 'unitig_578.g16132' => 'ugi', 'unitig_578.g16718' => 'ugi', 'unitig_62.g23481' => 'ugi', 'unitig_744.g24535' => 'ugi', 'unitig_749.g13525' => 'ugi', 'vmacro01248' => 'vma', 'vmacro02290' => 'vma', 'vmacro10946' => 'vma', 'vmacro11865' => 'vma', 'vmacro12493' => 'vma', 'vmacro17322' => 'vma', 'vmacro21599' => 'vma', 'vmacro23041' => 'vma', 'VMungo0251G0004' => 'vmu', 'VMungo0251G2639' => 'vmu', 'VMungo0251G2967' => 'vmu', 'VMungo0540G0864' => 'vmu', 'VMungo0540G1569' => 'vmu', 'VMungo0647G0317' => 'vmu', 'VMungo0720G1373' => 'vmu', 'VMungo0720G1508' => 'vmu', 'VMungo1080G0485' => 'vmu', 'VMungo1215G3177' => 'vmu', 'Zm00001eb112600' => 'zma', 'Zm00001eb120220' => 'zma', 'Zm00001eb153240' => 'zma', 'Zm00001eb168880' => 'zma', 'Zm00001eb213920' => 'zma', 'Zm00001eb228280' => 'zma', 'Zm00001eb254580' => 'zma', 'Zm00001eb272180' => 'zma', 'Zm00001eb293190' => 'zma', 'Zm00001eb322930' => 'zma', 'Zm00001eb353360' => 'zma', 'Zm00001eb353390' => 'zma', 'Zm00001eb353430' => 'zma', 'Zm00001eb353440' => 'zma', 'Zm00001eb353780' => 'zma' ), 'gf_id' => 'HOM05D000499', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000499' ), 'data_identifier' => 'HOM05D000499', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000499', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1066', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p29780' => 'bna', 'A02p33180' => 'bna', 'A03p16470' => 'bna', 'A03p66010' => 'bna', 'A04p25970' => 'bna', 'A06p01270' => 'bna', 'A06p46080' => 'bna', 'A07p11400' => 'bna', 'A08p01840' => 'bna', 'A08p08230' => 'bna', 'A08p25740' => 'bna', 'A09p32070' => 'bna', 'A09p37830' => 'bna', 'A09p42840' => 'bna', 'A09p42850' => 'bna', 'Aa31LG10G2060' => 'aar', 'Aa31LG2G7410' => 'aar', 'Aa31LG6G10200' => 'aar', 'Aa31LG6G16680' => 'aar', 'Aa31LG6G8470' => 'aar', 'Aa31LG9G12730' => 'aar', 'Aa31LG9G13680' => 'aar', 'Aa31LG9G14920' => 'aar', 'Aa31LG9G6650' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4977' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5467' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3254' => 'aag', 'Actinidia02578' => 'ach', 'Actinidia07693' => 'ach', 'Actinidia08413' => 'ach', 'Actinidia08414' => 'ach', 'Actinidia15289' => 'ach', 'Actinidia19871' => 'ach', 'Actinidia21475' => 'ach', 'Actinidia22576' => 'ach', 'Actinidia28327' => 'ach', 'Actinidia32491' => 'ach', 'Actinidia39463' => 'ach', 'Actinidia39571' => 'ach', 'Ah.01g013750' => 'amhyb', 'Ah.01g023210' => 'amhyb', 'Ah.04g164850' => 'amhyb', 'Ah.05g178060' => 'amhyb', 'Ah.07g204270' => 'amhyb', 'Ah.07g208480' => 'amhyb', 'Ah.09g237410' => 'amhyb', 'Ah.14g089460' => 'amhyb', 'AL1G41790' => 'aly', 'AL1G49050' => 'aly', 'AL1G53810' => 'aly', 'AL1G61400' => 'aly', 'AL4G18580' => 'aly', 'AL5G12510' => 'aly', 'AL5G12540' => 'aly', 'AL6G43230' => 'aly', 'AL7G10370' => 'aly', 'AL7G19250' => 'aly', 'AL8G12240' => 'aly', 'AL8G18540' => 'aly', 'Aqoxy1G02409' => 'aox', 'Aqoxy2G03993' => 'aox', 'Aqoxy3G03357' => 'aox', 'Aqoxy4G00785' => 'aox', 'Aqoxy5G02598' => 'aox', 'Aqoxy6G00132' => 'aox', 'Aqoxy7G01776' => 'aox', 'Aqoxy7G02316' => 'aox', 'Aqoxy7G03973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.12AFKW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B8730' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27IQR1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3F75VG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3RE0GA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41TCQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.527VTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FIR39' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5W8UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DA38EV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ63HS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H1I32C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HC27T5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4M8AP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7N3CZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9UVDZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LS1NQA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT1D4B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SKC4TM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCFV76' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF9Q1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQWD9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1ZM88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WE07RT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YCK7VH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJE6Q6' => 'arhy', 'AT1G28240' => 'ath', 'AT1G34550' => 'ath', 'AT1G53040' => 'ath', 'AT2G02910' => 'ath', 'AT4G09630' => 'ath', 'AT4G38500' => 'ath', 'AT5G42660' => 'ath', 'AT5G46220' => 'ath', 'ATR0152G026' => 'atr', 'ATR0564G343' => 'atr', 'ATR0706G151' => 'atr', 'ATR0733G207' => 'atr', 'ATR0751G234' => 'atr', 'ATR0807G048' => 'atr', 'ATR1091G084' => 'atr', 'Atru.chr10.1229' => 'acertr', 'Atru.chr10.1230' => 'acertr', 'Atru.chr10.1874' => 'acertr', 'Atru.chr11.1808' => 'acertr', 'Atru.chr13.1795' => 'acertr', 'Atru.chr13.570' => 'acertr', 'Atru.chr2.2608' => 'acertr', 'Atru.chr2.2609' => 'acertr', 'Atru.chr5.3428' => 'acertr', 'Atru.chr8.1171' => 'acertr', 'AUR62004651' => 'cqu', 'AUR62008675' => 'cqu', 'AUR62010014' => 'cqu', 'AUR62013004' => 'cqu', 'AUR62014825' => 'cqu', 'AUR62015015' => 'cqu', 'AUR62015151' => 'cqu', 'AUR62017020' => 'cqu', 'AUR62019422' => 'cqu', 'AUR62023570' => 'cqu', 'AUR62025571' => 'cqu', 'AUR62029098' => 'cqu', 'AUR62033863' => 'cqu', 'AUR62034296' => 'cqu', 'AUR62040075' => 'cqu', 'BcaB02g07334' => 'bca', 'BcaB02g10575' => 'bca', 'BcaB03g12119' => 'bca', 'BcaB03g12120' => 'bca', 'BcaB03g13945' => 'bca', 'BcaB04g17123' => 'bca', 'BcaB04g17867' => 'bca', 'BcaB04g19839' => 'bca', 'BcaB07g30317' => 'bca', 'BcaB07g32432' => 'bca', 'BcaB07g33362' => 'bca', 'BcaB08g36611' => 'bca', 'BcaC01g00028' => 'bca', 'BcaC01g01356' => 'bca', 'BcaC01g02034' => 'bca', 'BcaC01g06051' => 'bca', 'BcaC03g16839' => 'bca', 'BcaC03g17176' => 'bca', 'BcaC05g26829' => 'bca', 'BcaC06g31490' => 'bca', 'BcaC06g35344' => 'bca', 'BcaC06g36570' => 'bca', 'BcaC07g37537' => 'bca', 'BcaC08g43491' => 'bca', 'BcaC08g43773' => 'bca', 'BcaNung00234' => 'bca', 'BcaNung01982' => 'bca', 'BcaNung03707' => 'bca', 'BcaNung06454' => 'bca', 'BolC2t10762H' => 'bol', 'BolC2t11191H' => 'bol', 'BolC3t14322H' => 'bol', 'BolC3t19747H' => 'bol', 'BolC3t21425H' => 'bol', 'BolC4t27800H' => 'bol', 'BolC5t31423H' => 'bol', 'BolC6t35951H' => 'bol', 'BolC6t36282H' => 'bol', 'BolC7t40678H' => 'bol', 'BolC7t40679H' => 'bol', 'BolC7t42222H' => 'bol', 'BolC7t43492H' => 'bol', 'BolC7t46785H' => 'bol', 'BolC8t47853H' => 'bol', 'BolC9t56805H' => 'bol', 'BraA02t08000Z' => 'bra', 'BraA02t08341Z' => 'bra', 'BraA03t10936Z' => 'bra', 'BraA03t15657Z' => 'bra', 'BraA04t18100Z' => 'bra', 'BraA05t20523Z' => 'bra', 'BraA06t23353Z' => 'bra', 'BraA06t27473Z' => 'bra', 'BraA06t27769Z' => 'bra', 'BraA07t28928Z' => 'bra', 'BraA08t32236Z' => 'bra', 'BraA08t32841Z' => 'bra', 'BraA08t34524Z' => 'bra', 'BraA09t38742Z' => 'bra', 'BraA09t39295Z' => 'bra', 'C02p47180' => 'bna', 'C02p50990' => 'bna', 'C03p19360' => 'bna', 'C03p74950' => 'bna', 'C03p91000' => 'bna', 'C04p63260' => 'bna', 'C05p27050' => 'bna', 'C06p08750' => 'bna', 'C06p11490' => 'bna', 'C07p02820' => 'bna', 'C07p17180' => 'bna', 'C07p29440' => 'bna', 'C07p63730' => 'bna', 'C09p39260' => 'bna', 'CAN.G1164.34' => 'can', 'CAN.G1164.39' => 'can', 'CAN.G1530.3' => 'can', 'CAN.G162.61' => 'can', 'CAN.G176.6' => 'can', 'CAN.G289.49' => 'can', 'CAN.G370.21' => 'can', 'CAN.G370.22' => 'can', 'CAN.G371.117' => 'can', 'CAN.G58.37' => 'can', 'CAN.G588.98' => 'can', 'CANSAT21G2266' => 'cansat', 'CANSAT25G2799' => 'cansat', 'CANSAT35G0862' => 'cansat', 'CANSAT35G1704' => 'cansat', 'CANSAT35G1760' => 'cansat', 'CANSAT56G3971' => 'cansat', 'CANSAT56G4116' => 'cansat', 'CANSAT80G1259' => 'cansat', 'CARHR027730' => 'chi', 'CARHR033880' => 'chi', 'CARHR043270' => 'chi', 'CARHR145330' => 'chi', 'CARHR145340' => 'chi', 'CARHR175570' => 'chi', 'CARHR181570' => 'chi', 'CARHR258470' => 'chi', 'CARHR260490' => 'chi', 'CARHR294220' => 'chi', 'Carub.0001s2668' => 'cru', 'Carub.0001s3257' => 'cru', 'Carub.0001s4220' => 'cru', 'Carub.0005s0179' => 'cru', 'Carub.0006s2807' => 'cru', 'Carub.0007s0039' => 'cru', 'Carub.0008s0169' => 'cru', 'Carub.0008s0636' => 'cru', 'Ca_00338_v3' => 'car', 'Ca_00542_v3' => 'car', 'Ca_01844_v3' => 'car', 'Ca_10611_v3' => 'car', 'Ca_13326_v3' => 'car', 'Ca_17944_v3' => 'car', 'Ca_18546_v3' => 'car', 'Ca_24219_v3' => 'car', 'Ca_29972_v3' => 'car', 'CBR_g3681' => 'cbr', 'CBR_g40021' => 'cbr', 'Cc01_g08140' => 'ccan', 'Cc02_g13410' => 'ccan', 'Cc02_g37480' => 'ccan', 'Cc05_g12030' => 'ccan', 'Cc09_g03370' => 'ccan', 'Cc09_g10300' => 'ccan', 'Cc10_g03530' => 'ccan', 'Cc10_g11380' => 'ccan', 'CDE01G0176' => 'cde', 'CDE02G0675' => 'cde', 'CDE02G0942' => 'cde', 'CDE02G1153' => 'cde', 'CDE02G4177' => 'cde', 'CDE04G2117' => 'cde', 'CDE04G2736' => 'cde', 'CDE08G1161' => 'cde', 'CDE09G1238' => 'cde', 'Cfa000467' => 'cfa', 'Cfa000947' => 'cfa', 'Cfa004969' => 'cfa', 'Cfa005284' => 'cfa', 'Cfa008993' => 'cfa', 'Cfa018187' => 'cfa', 'Cfa018454' => 'cfa', 'Cfa020585' => 'cfa', 'Ciclev10000424m.g' => 'ccl', 'Ciclev10003605m.g' => 'ccl', 'Ciclev10007828m.g' => 'ccl', 'Ciclev10014620m.g' => 'ccl', 'Ciclev10015169m.g' => 'ccl', 'Ciclev10018291m.g' => 'ccl', 'Ciclev10028256m.g' => 'ccl', 'Ciclev10033822m.g' => 'ccl', 'CiPaw.05G060300' => 'cil', 'CiPaw.05G085000' => 'cil', 'CiPaw.06G083700' => 'cil', 'CiPaw.06G120300' => 'cil', 'CiPaw.09G060500' => 'cil', 'CiPaw.09G123800' => 'cil', 'CiPaw.11G169700' => 'cil', 'CiPaw.12G118300' => 'cil', 'CiPaw.15G071000' => 'cil', 'CiPaw.15G081900' => 'cil', 'ClCG01G024610' => 'cla', 'ClCG03G006070' => 'cla', 'ClCG05G019250' => 'cla', 'ClCG09G009500' => 'cla', 'ClCG11G008200' => 'cla', 'ClCG11G018080' => 'cla', 'COL.COLO4_17373' => 'col', 'COL.COLO4_22994' => 'col', 'COL.COLO4_26389' => 'col', 'COL.COLO4_27170' => 'col', 'COL.COLO4_31074' => 'col', 'COL.COLO4_31465' => 'col', 'COL.COLO4_36438' => 'col', 'COL.COLO4_36439' => 'col', 'Cpa.g.c38781' => 'cpa', 'Cpa.g.sc128.12' => 'cpa', 'Cpa.g.sc166.7' => 'cpa', 'Cpa.g.sc166.8' => 'cpa', 'Cpa.g.sc20.111' => 'cpa', 'Cpa.g.sc27.31' => 'cpa', 'Cpa.g.sc64.36' => 'cpa', 'Cpa.g.sc64.37' => 'cpa', 'Cpa.g.sc66.49' => 'cpa', 'Cpa.g.sc80.64' => 'cpa', 'CsaV3_1G012320' => 'csa', 'CsaV3_2G008480' => 'csa', 'CsaV3_2G033450' => 'csa', 'CsaV3_3G044830' => 'csa', 'CsaV3_4G033710' => 'csa', 'CsaV3_6G051730' => 'csa', 'CsaV3_7G025350' => 'csa', 'CSS0001067' => 'camsi', 'CSS0005996' => 'camsi', 'CSS0006590' => 'camsi', 'CSS0009673' => 'camsi', 'CSS0010201' => 'camsi', 'CSS0010549' => 'camsi', 'CSS0011364' => 'camsi', 'CSS0014473' => 'camsi', 'CSS0014961' => 'camsi', 'CSS0020191' => 'camsi', 'CSS0021165' => 'camsi', 'CSS0022306' => 'camsi', 'CSS0030591' => 'camsi', 'CSS0030696' => 'camsi', 'CSS0032653' => 'camsi', 'CSS0037487' => 'camsi', 'CSS0041102' => 'camsi', 'CSS0041261' => 'camsi', 'CSS0046246' => 'camsi', 'CSS0049256' => 'camsi', 'DCAR_004075' => 'dca', 'DCAR_011538' => 'dca', 'DCAR_019553' => 'dca', 'DCAR_020952' => 'dca', 'DCAR_021739' => 'dca', 'DCAR_027407' => 'dca', 'DCAR_027913' => 'dca', 'DCAR_028066' => 'dca', 'Dinv05899' => 'din', 'Dinv07563' => 'din', 'Dinv08010' => 'din', 'Dinv14125' => 'din', 'Dinv20172' => 'din', 'Dinv30743' => 'din', 'Dinv31229' => 'din', 'Dinv34162' => 'din', 'Dinv36028' => 'din', 'Dinv39368' => 'din', 'Dinv40565' => 'din', 'Dinv41706' => 'din', 'Duzib052G0089' => 'dzi', 'Duzib116G0641' => 'dzi', 'Duzib132G0069' => 'dzi', 'Duzib132G1219' => 'dzi', 'Duzib147G0278' => 'dzi', 'Duzib160G0480' => 'dzi', 'Duzib170G0661' => 'dzi', 'Duzib177G0591' => 'dzi', 'Duzib187G1353' => 'dzi', 'Duzib192G0858' => 'dzi', 'Duzib192G0883' => 'dzi', 'Duzib213G0506' => 'dzi', 'Duzib235G0289' => 'dzi', 'Duzib251G0422' => 'dzi', 'ECA232G3898' => 'eca', 'ECA233G5950' => 'eca', 'ECA234G1699' => 'eca', 'ECA234G2421' => 'eca', 'ECA236G0426' => 'eca', 'ECA236G4331' => 'eca', 'ECA248G2573' => 'eca', 'EL10Ac1g00077' => 'bvu', 'EL10Ac1g01746' => 'bvu', 'EL10Ac2g03464' => 'bvu', 'EL10Ac4g08176' => 'bvu', 'EL10Ac7g17521' => 'bvu', 'EL10Ac8g20386' => 'bvu', 'EL10Ac9g21343' => 'bvu', 'EL10Ac9g22688' => 'bvu', 'Eucgr.B03434' => 'egr', 'Eucgr.D00618' => 'egr', 'Eucgr.E02395' => 'egr', 'Eucgr.F01129' => 'egr', 'Eucgr.F02622' => 'egr', 'Eucgr.F04207' => 'egr', 'FAN01G0570' => 'fan', 'FAN03G3351' => 'fan', 'FAN06G3702' => 'fan', 'FAN07G2149' => 'fan', 'FAN10G3758' => 'fan', 'FAN11G1170' => 'fan', 'FAN11G2050' => 'fan', 'FAN11G2724' => 'fan', 'FAN12G1700' => 'fan', 'FAN12G2028' => 'fan', 'FAN15G1160' => 'fan', 'FAN15G3063' => 'fan', 'FAN16G2540' => 'fan', 'FAN16G3077' => 'fan', 'FAN16G3624' => 'fan', 'FAN17G0221' => 'fan', 'FAN20G2492' => 'fan', 'FAN20G2905' => 'fan', 'FAN21G0548' => 'fan', 'FAN21G1300' => 'fan', 'FAN22G0077' => 'fan', 'FAN22G1315' => 'fan', 'FAN24G1280' => 'fan', 'FAN24G1445' => 'fan', 'FAN24G3527' => 'fan', 'FAN25G0464' => 'fan', 'FAN25G2885' => 'fan', 'FAN25G3270' => 'fan', 'FAN27G1101' => 'fan', 'FAN27G2846' => 'fan', 'FAN27G3524' => 'fan', 'FvH4_2g11770' => 'fve', 'FvH4_2g15630' => 'fve', 'FvH4_3g05570' => 'fve', 'FvH4_3g09110' => 'fve', 'FvH4_3g19940' => 'fve', 'FvH4_4g04821' => 'fve', 'FvH4_4g31480' => 'fve', 'FvH4_7g01740' => 'fve', 'Glyma.05G130400' => 'gma', 'Glyma.05G156400' => 'gma', 'Glyma.07G197000' => 'gma', 'Glyma.08G085151' => 'gma', 'Glyma.08G114500' => 'gma', 'Glyma.08G300400' => 'gma', 'Glyma.10G215800' => 'gma', 'Glyma.12G224400' => 'gma', 'Glyma.13G179300' => 'gma', 'Glyma.13G218151' => 'gma', 'Glyma.13G238800' => 'gma', 'Glyma.13G276900' => 'gma', 'Glyma.14G078200' => 'gma', 'Glyma.15G074500' => 'gma', 'Glyma.15G094100' => 'gma', 'Glyma.17G247200' => 'gma', 'Glyma.18G120100' => 'gma', 'Glyma.20G176000' => 'gma', 'Gohir.A01G063600' => 'ghi', 'Gohir.A01G170301' => 'ghi', 'Gohir.A02G060500' => 'ghi', 'Gohir.A05G133850' => 'ghi', 'Gohir.A05G161400' => 'ghi', 'Gohir.A06G012900' => 'ghi', 'Gohir.A06G035901' => 'ghi', 'Gohir.A06G127100' => 'ghi', 'Gohir.A06G210500' => 'ghi', 'Gohir.A08G008650' => 'ghi', 'Gohir.A09G072700' => 'ghi', 'Gohir.A09G088301' => 'ghi', 'Gohir.A10G040600' => 'ghi', 'Gohir.A12G036300' => 'ghi', 'Gohir.A12G143350' => 'ghi', 'Gohir.A12G165500' => 'ghi', 'Gohir.A13G145700' => 'ghi', 'Gohir.D01G050000' => 'ghi', 'Gohir.D01G051366' => 'ghi', 'Gohir.D01G161350' => 'ghi', 'Gohir.D02G065900' => 'ghi', 'Gohir.D05G164200' => 'ghi', 'Gohir.D05G355500' => 'ghi', 'Gohir.D06G010400' => 'ghi', 'Gohir.D06G111250' => 'ghi', 'Gohir.D06G132000' => 'ghi', 'Gohir.D06G210500' => 'ghi', 'Gohir.D07G165675' => 'ghi', 'Gohir.D08G062240' => 'ghi', 'Gohir.D08G086101' => 'ghi', 'Gohir.D08G138060' => 'ghi', 'Gohir.D09G072300' => 'ghi', 'Gohir.D10G041400' => 'ghi', 'Gohir.D11G191020' => 'ghi', 'Gohir.D11G212066' => 'ghi', 'Gohir.D12G036300' => 'ghi', 'Gohir.D12G168600' => 'ghi', 'Gohir.D13G150600' => 'ghi', 'Gorai.001G057300' => 'gra', 'Gorai.002G069900' => 'gra', 'Gorai.002G200000' => 'gra', 'Gorai.003G067600' => 'gra', 'Gorai.005G074800' => 'gra', 'Gorai.006G087300' => 'gra', 'Gorai.008G037500' => 'gra', 'Gorai.008G181400' => 'gra', 'Gorai.009G169400' => 'gra', 'Gorai.009G387900' => 'gra', 'Gorai.010G013300' => 'gra', 'Gorai.010G153800' => 'gra', 'Gorai.010G255800' => 'gra', 'Gorai.011G043700' => 'gra', 'Gorai.011G198900' => 'gra', 'Gorai.013G168400' => 'gra', 'GSVIVG01005212001' => 'vvi', 'GSVIVG01006163001' => 'vvi', 'GSVIVG01009625001' => 'vvi', 'GSVIVG01014338001' => 'vvi', 'GSVIVG01020005001' => 'vvi', 'GSVIVG01021450001' => 'vvi', 'GSVIVG01023975001' => 'vvi', 'GSVIVG01034490001' => 'vvi', 'HanXRQChr04g0112071' => 'han', 'HanXRQChr05g0131151' => 'han', 'HanXRQChr09g0262371' => 'han', 'HanXRQChr09g0268401' => 'han', 'HanXRQChr10g0279241' => 'han', 'HanXRQChr10g0297961' => 'han', 'HanXRQChr11g0326231' => 'han', 'HanXRQChr11g0328471' => 'han', 'HanXRQChr16g0507941' => 'han', 'HanXRQChr17g0560211' => 'han', 'Haze_02108' => 'cav', 'Haze_02428' => 'cav', 'Haze_05593' => 'cav', 'Haze_06448' => 'cav', 'Haze_09427' => 'cav', 'Haze_12022' => 'cav', 'Haze_17612' => 'cav', 'Haze_17928' => 'cav', 'Hma1.2p1_0032F.1_g019250' => 'hma', 'Hma1.2p1_0163F.1_g072690' => 'hma', 'Hma1.2p1_0265F.1_g106710' => 'hma', 'Hma1.2p1_0286F.1_g113970' => 'hma', 'Hma1.2p1_0363F.1_g136640' => 'hma', 'Hma1.2p1_0584F.1_g183470' => 'hma', 'Hma1.2p1_0885F.1_g232570' => 'hma', 'HPP92_006022' => 'vpl', 'HPP92_007320' => 'vpl', 'HPP92_011521' => 'vpl', 'HPP92_019387' => 'vpl', 'HPP92_024038' => 'vpl', 'Hund05891' => 'sun', 'Hund06450' => 'sun', 'Hund12053' => 'sun', 'Hund16800' => 'sun', 'Hund21222' => 'sun', 'Hund22896' => 'sun', 'Hund23746' => 'sun', 'Hund27083' => 'sun', 'Lalb_Chr02g0141831' => 'lal', 'Lalb_Chr02g0141841' => 'lal', 'Lalb_Chr05g0220411' => 'lal', 'Lalb_Chr06g0162081' => 'lal', 'Lalb_Chr09g0327651' => 'lal', 'Lalb_Chr13g0295051' => 'lal', 'Lalb_Chr15g0086801' => 'lal', 'Lalb_Chr16g0383781' => 'lal', 'Lalb_Chr16g0383791' => 'lal', 'Lalb_Chr18g0055441' => 'lal', 'Lalb_Chr18g0059611' => 'lal', 'Lalb_Chr20g0109661' => 'lal', 'Lalb_Chr20g0109831' => 'lal', 'Lalb_Chr20g0121871' => 'lal', 'Lalb_Chr22g0355361' => 'lal', 'Lalb_Chr25g0286371' => 'lal', 'Lj1A1187G43' => 'lonja', 'Lj1A1205T50' => 'lonja', 'Lj1A800G33' => 'lonja', 'Lj1C1187T7' => 'lonja', 'Lj1C843T11' => 'lonja', 'Lj1g0010940' => 'lja', 'Lj2A288T69' => 'lonja', 'Lj3g0024276' => 'lja', 'Lj4A47T76' => 'lonja', 'Lj4g0005805' => 'lja', 'Lj4g0006097' => 'lja', 'Lj4g0008528' => 'lja', 'Lj4g0024907' => 'lja', 'Lj5g0012472' => 'lja', 'Lj5g0018648' => 'lja', 'Lj6C789G1' => 'lonja', 'Lj6g0004000' => 'lja', 'Lj7A292G67' => 'lonja', 'Lj7A292T64' => 'lonja', 'Lj9A400T58' => 'lonja', 'Lsat_1_v5_gn_1_126181' => 'lsa', 'Lsat_1_v5_gn_4_123041' => 'lsa', 'Lsat_1_v5_gn_4_133620' => 'lsa', 'Lsat_1_v5_gn_4_53221' => 'lsa', 'Lsat_1_v5_gn_4_71961' => 'lsa', 'Lsat_1_v5_gn_7_105241' => 'lsa', 'Lsat_1_v5_gn_7_21361' => 'lsa', 'Lsat_1_v5_gn_7_28860' => 'lsa', 'Lsat_1_v5_gn_7_31260' => 'lsa', 'Lsat_1_v5_gn_8_52801' => 'lsa', 'Manes.02G191400' => 'mes', 'Manes.03G110100' => 'mes', 'Manes.04G071100' => 'mes', 'Manes.05G100500' => 'mes', 'Manes.05G164700' => 'mes', 'Manes.15G087000' => 'mes', 'Manes.15G121500' => 'mes', 'Manes.16G028300' => 'mes', 'Manes.17G046100' => 'mes', 'Manes.17G069800' => 'mes', 'Manes.18G100500' => 'mes', 'Mapoly0002s0109' => 'mpo', 'Mapoly0024s0007' => 'mpo', 'Mapoly0089s0032' => 'mpo', 'MBI04_g42241_MAGBIO' => 'mbi', 'MBI05_g11988_MAGBIO' => 'mbi', 'MBI05_g35452_MAGBIO' => 'mbi', 'MBI07_g30179_MAGBIO' => 'mbi', 'MBI07_g35859_MAGBIO' => 'mbi', 'MBI07_g35860_MAGBIO' => 'mbi', 'MBI07_g37166_MAGBIO' => 'mbi', 'MBI08_g18172_MAGBIO' => 'mbi', 'MBI09_g08441_MAGBIO' => 'mbi', 'MBI13_g01676_MAGBIO' => 'mbi', 'MBI14_g42955_MAGBIO' => 'mbi', 'MBI16_g13161_MAGBIO' => 'mbi', 'MBI17_g27204_MAGBIO' => 'mbi', 'MBI19_g21595_MAGBIO' => 'mbi', 'MD00G1148400' => 'mdo', 'MD02G1301200' => 'mdo', 'MD03G1227800' => 'mdo', 'MD05G1041100' => 'mdo', 'MD05G1124800' => 'mdo', 'MD05G1284000' => 'mdo', 'MD05G1338800' => 'mdo', 'MD05G1338900' => 'mdo', 'MD07G1022800' => 'mdo', 'MD10G1047500' => 'mdo', 'MD10G1127500' => 'mdo', 'MD10G1262300' => 'mdo', 'MD10G1293800' => 'mdo', 'MD16G1074300' => 'mdo', 'Medtr1g021670' => 'mtr', 'Medtr1g096320' => 'mtr', 'Medtr2g013690' => 'mtr', 'Medtr2g019450' => 'mtr', 'Medtr2g085170' => 'mtr', 'Medtr4g088785' => 'mtr', 'Medtr8g055930' => 'mtr', 'Medtr8g085850' => 'mtr', 'MELO3C002605.2' => 'cme', 'MELO3C003891.2' => 'cme', 'MELO3C004012.2' => 'cme', 'MELO3C007134.2' => 'cme', 'MELO3C008118.2' => 'cme', 'MELO3C016700.2' => 'cme', 'MELO3C024127.2' => 'cme', 'MELO3C033361.2' => 'cme', 'MELO3C033362.2' => 'cme', 'Migut.C00430' => 'egut', 'Migut.C01246' => 'egut', 'Migut.E00101' => 'egut', 'Migut.H01486' => 'egut', 'Migut.H01939' => 'egut', 'Migut.K00360' => 'egut', 'Migut.M00910' => 'egut', 'Migut.M01139' => 'egut', 'Migut.N02677' => 'egut', 'MSTRG.13252' => 'ama', 'MSTRG.14701' => 'ama', 'MSTRG.1521' => 'ama', 'MSTRG.15884' => 'ama', 'MSTRG.16242' => 'ama', 'MSTRG.22285' => 'ama', 'MSTRG.22444' => 'ama', 'MSTRG.2349' => 'ama', 'MSTRG.26308' => 'ama', 'MSTRG.28296' => 'ama', 'MSTRG.9895' => 'ama', 'Nitab4.5_0000110g0060' => 'nta', 'Nitab4.5_0000420g0130' => 'nta', 'Nitab4.5_0000422g0030' => 'nta', 'Nitab4.5_0000560g0180' => 'nta', 'Nitab4.5_0000703g0100' => 'nta', 'Nitab4.5_0000786g0200' => 'nta', 'Nitab4.5_0001336g0020' => 'nta', 'Nitab4.5_0001796g0030' => 'nta', 'Nitab4.5_0003348g0060' => 'nta', 'Nitab4.5_0003698g0040' => 'nta', 'Nitab4.5_0003942g0090' => 'nta', 'Nitab4.5_0004775g0070' => 'nta', 'Nitab4.5_0004864g0030' => 'nta', 'Nitab4.5_0005615g0020' => 'nta', 'Nitab4.5_0009288g0030' => 'nta', 'Nitab4.5_0009341g0010' => 'nta', 'Nitab4.5_0009535g0010' => 'nta', 'Nn1g03995' => 'nnu', 'Nn1g04100' => 'nnu', 'Nn1g06530' => 'nnu', 'Nn3g16404' => 'nnu', 'Nn3g17212' => 'nnu', 'Nn3g20776' => 'nnu', 'Nn3g21923' => 'nnu', 'Nn5g27737' => 'nnu', 'Nn5g29461' => 'nnu', 'Nn7g38355' => 'nnu', 'Nn8g39873' => 'nnu', 'Oeu000548.2' => 'oeu', 'Oeu004672.1' => 'oeu', 'Oeu015605.2' => 'oeu', 'Oeu016092.1' => 'oeu', 'Oeu017879.3' => 'oeu', 'Oeu024910.1' => 'oeu', 'Oeu028965.1' => 'oeu', 'Oeu031269.1' => 'oeu', 'Oeu031270.1' => 'oeu', 'Oeu032535.1' => 'oeu', 'Oeu034151.1' => 'oeu', 'Oeu034152.1' => 'oeu', 'Oeu034588.2' => 'oeu', 'Oeu050846.1' => 'oeu', 'Oeu050849.2' => 'oeu', 'Oeu051063.2' => 'oeu', 'Oeu052368.1' => 'oeu', 'Oeu052370.1' => 'oeu', 'Os01g0210400' => 'osa', 'Os01g0304300' => 'osa', 'Os01g0749100' => 'osa', 'Os02g0745800' => 'osa', 'Os03g0769050' => 'osa', 'Os05g0531500' => 'osa', 'Os06g0724300' => 'osa', 'Os11g0198100' => 'osa', 'Peaxi162Scf00069g01425' => 'pax', 'Peaxi162Scf00280g00811' => 'pax', 'Peaxi162Scf00310g00615' => 'pax', 'Peaxi162Scf00362g00542' => 'pax', 'Peaxi162Scf00461g00310' => 'pax', 'Peaxi162Scf00530g00118' => 'pax', 'Peaxi162Scf00541g00057' => 'pax', 'Peaxi162Scf00661g00017' => 'pax', 'Peaxi162Scf00926g00027' => 'pax', 'Peaxi162Scf01064g00263' => 'pax', 'Peaxi162Scf01211g00135' => 'pax', 'PGR004G2336' => 'pgr', 'PGR042G0327' => 'pgr', 'PGR042G1957' => 'pgr', 'PGR042G2003' => 'pgr', 'PGR042G3929' => 'pgr', 'PGR083G1137' => 'pgr', 'PGR083G1364' => 'pgr', 'PGSC0003DMG400003381' => 'stu', 'PGSC0003DMG400003417' => 'stu', 'PGSC0003DMG400008981' => 'stu', 'PGSC0003DMG400012417' => 'stu', 'PGSC0003DMG400012823' => 'stu', 'PGSC0003DMG400016885' => 'stu', 'PGSC0003DMG400022812' => 'stu', 'PGSC0003DMG400029726' => 'stu', 'PGSC0003DMG401009243' => 'stu', 'PGSC0003DMG401031505' => 'stu', 'PGSC0003DMG402031505' => 'stu', 'Phvul.001G017600' => 'pvu', 'Phvul.002G193500' => 'pvu', 'Phvul.002G228900' => 'pvu', 'Phvul.002G236800' => 'pvu', 'Phvul.003G049500' => 'pvu', 'Phvul.005G072000' => 'pvu', 'Phvul.006G164800' => 'pvu', 'Phvul.006G185100' => 'pvu', 'Phvul.007G090000' => 'pvu', 'Potri.001G399800' => 'ptr', 'Potri.002G149900' => 'ptr', 'Potri.004G044100' => 'ptr', 'Potri.004G177600' => 'ptr', 'Potri.009G138000' => 'ptr', 'Potri.010G094000' => 'ptr', 'Potri.011G053000' => 'ptr', 'Potri.011G119300' => 'ptr', 'Potri.013G113700' => 'ptr', 'Potri.018G107800' => 'ptr', 'Potri.019G084100' => 'ptr', 'Pp3c14_23720' => 'ppa', 'Pp3c16_6340' => 'ppa', 'Pp3c23_13420' => 'ppa', 'Pp3c24_2740' => 'ppa', 'Pp3c25_860' => 'ppa', 'Pp3c8_21750' => 'ppa', 'Prupe.1G273000' => 'ppe', 'Prupe.1G273700' => 'ppe', 'Prupe.1G274100' => 'ppe', 'Prupe.2G023300' => 'ppe', 'Prupe.4G048000' => 'ppe', 'Prupe.4G080400' => 'ppe', 'Prupe.4G181200' => 'ppe', 'Prupe.8G056900' => 'ppe', 'Prupe.8G168700' => 'ppe', 'Psat1g189080' => 'psa', 'Psat1g204760' => 'psa', 'Psat4g175560' => 'psa', 'Psat4g177720' => 'psa', 'Psat5g244240' => 'psa', 'Psat6g010720' => 'psa', 'Psat6g187200' => 'psa', 'Psat7g072040' => 'psa', 'PSO017G3501' => 'pso', 'PSO063G2148' => 'pso', 'PSO063G5608' => 'pso', 'PSO210G6392' => 'pso', 'PSO541G2319' => 'pso', 'PSO541G2836' => 'pso', 'PSO541G4012' => 'pso', 'PSO541G6253' => 'pso', 'PSO675G0580' => 'pso', 'PSO675G0856' => 'pso', 'PSO675G5635' => 'pso', 'PSO675G9157' => 'pso', 'PSO832G1660' => 'pso', 'PSO832G1969' => 'pso', 'QL02p007186' => 'qlo', 'QL02p033904' => 'qlo', 'QL03p064391' => 'qlo', 'QL05p040593' => 'qlo', 'QL05p058242' => 'qlo', 'QL08p021825' => 'qlo', 'QL11p004981' => 'qlo', 'RcHm_v2.0_Chr1g0318301' => 'rch', 'RcHm_v2.0_Chr4g0418501' => 'rch', 'RcHm_v2.0_Chr4g0439971' => 'rch', 'RcHm_v2.0_Chr5g0008541' => 'rch', 'RcHm_v2.0_Chr5g0014101' => 'rch', 'RcHm_v2.0_Chr5g0014131' => 'rch', 'RcHm_v2.0_Chr5g0033621' => 'rch', 'RcHm_v2.0_Chr6g0272041' => 'rch', 'RcHm_v2.0_Chr6g0278831' => 'rch', 'Rhsim02G0130400' => 'rsi', 'Rhsim02G0171100' => 'rsi', 'Rhsim05G0053000' => 'rsi', 'Rhsim05G0053100' => 'rsi', 'Rhsim06G0096500' => 'rsi', 'Rhsim06G0096600' => 'rsi', 'Rhsim06G0199100' => 'rsi', 'Rhsim12G0062300' => 'rsi', 'Rhsim12G0062800' => 'rsi', 'Sabra02G0118600' => 'sbr', 'Sabra04G0027300' => 'sbr', 'Sabra04G0119500' => 'sbr', 'Sabra08G0112500' => 'sbr', 'Sabra11G0036800' => 'sbr', 'Sabra11G0103800' => 'sbr', 'Sabra13G0096300' => 'sbr', 'Sabra16G0262300' => 'sbr', 'Sabra18G0091700' => 'sbr', 'Sabra19G0095400' => 'sbr', 'SalBow6G3080' => 'sbo', 'SalBow7G1157' => 'sbo', 'SalBow7G2123' => 'sbo', 'SalBow7G2285' => 'sbo', 'SalBow7G3537' => 'sbo', 'SalBow8G2947' => 'sbo', 'SalBow8G4463' => 'sbo', 'SalBow8G5466' => 'sbo', 'Sc01g0001750' => 'sci', 'Sc02g0006640' => 'sci', 'Sc02g0006670' => 'sci', 'Sc04g0008220' => 'sci', 'Sc05g0006190' => 'sci', 'Sc08g0002760' => 'sci', 'Sc17g0006170' => 'sci', 'Sc22g0002050' => 'sci', 'Sc23g0001190' => 'sci', 'Sc24g0000980' => 'sci', 'Sed0006245' => 'sed', 'Sed0007543' => 'sed', 'Sed0009411' => 'sed', 'Sed0010765' => 'sed', 'Sed0012944' => 'sed', 'Sed0014682' => 'sed', 'Sed0016174' => 'sed', 'Sed0016796' => 'sed', 'Sed0020317' => 'sed', 'Sed0021467' => 'sed', 'SEGI_01316' => 'sgi', 'SEGI_03374' => 'sgi', 'SEGI_16265' => 'sgi', 'SEGI_18569' => 'sgi', 'SEGI_20351' => 'sgi', 'SEGI_26395' => 'sgi', 'SEGI_29469' => 'sgi', 'SEGI_34771' => 'sgi', 'SEGI_36769' => 'sgi', 'SEGI_37139' => 'sgi', 'SGA_v2.0_scaffold100G29687' => 'sas', 'SGA_v2.0_scaffold118G32472' => 'sas', 'SGA_v2.0_scaffold14G07051' => 'sas', 'SGA_v2.0_scaffold183G39845' => 'sas', 'SGA_v2.0_scaffold1G00174' => 'sas', 'SGA_v2.0_scaffold22G09714' => 'sas', 'SGA_v2.0_scaffold333G48992' => 'sas', 'SGA_v2.0_scaffold46G17491' => 'sas', 'SGA_v2.0_scaffold49G18294' => 'sas', 'SGA_v2.0_scaffold63G21658' => 'sas', 'SHI01741' => 'shi', 'SHI05771' => 'shi', 'SHI18077' => 'shi', 'SHI20525' => 'shi', 'SHI20527' => 'shi', 'SHI20528' => 'shi', 'SMO172G0185' => 'smo', 'SMO198G0020' => 'smo', 'SMO351G0006' => 'smo', 'SMO356G0118' => 'smo', 'SMO358G0296' => 'smo', 'SMO367G0079' => 'smo', 'SMO367G1277' => 'smo', 'Solyc01g014220.3' => 'sly', 'Solyc01g111770.2' => 'sly', 'Solyc02g078180.3' => 'sly', 'Solyc03g006430.3' => 'sly', 'Solyc03g006456.1' => 'sly', 'Solyc03g079860.2' => 'sly', 'Solyc04g079770.3' => 'sly', 'Solyc05g007430.4' => 'sly', 'Solyc07g063150.3' => 'sly', 'Solyc08g016620.3' => 'sly', 'Solyc09g057590.3' => 'sly', 'Solyc09g057600.1' => 'sly', 'Solyc10g009050.3' => 'sly', 'Solyc11g017420.2' => 'sly', 'Sopen01g053810' => 'spe', 'Sopen02g023040' => 'spe', 'Sopen03g002440' => 'spe', 'Sopen04g033350' => 'spe', 'Sopen05g003310' => 'spe', 'Sopen07g004050' => 'spe', 'Sopen07g031340' => 'spe', 'Sopen08g006990' => 'spe', 'Sopen10g004830' => 'spe', 'Sopen11g009370' => 'spe', 'Sp1g24450' => 'spa', 'Sp1g29670' => 'spa', 'Sp1g39600' => 'spa', 'Sp2g11080' => 'spa', 'Sp2g13970' => 'spa', 'Sp4g16130' => 'spa', 'Sp6g13080' => 'spa', 'Sp7g37270' => 'spa', 'TAR371G0065' => 'tar', 'TAR376G0340' => 'tar', 'TAR376G0435' => 'tar', 'TAR381G0002' => 'tar', 'TAR381G1236' => 'tar', 'TAR624G0055' => 'tar', 'TAR624G0324' => 'tar', 'TAR624G0696' => 'tar', 'TAR624G0906' => 'tar', 'TAR625G0107' => 'tar', 'TAR626G0015' => 'tar', 'TAR626G1356' => 'tar', 'TAR627G0888' => 'tar', 'TAR628G0399' => 'tar', 'TAR628G1327' => 'tar', 'TAR629G2831' => 'tar', 'TAR629G2874' => 'tar', 'TAR633G1432' => 'tar', 'TAR633G2771' => 'tar', 'THA.LOC104803394' => 'tha', 'THA.LOC104805153' => 'tha', 'THA.LOC104806784' => 'tha', 'THA.LOC104810473' => 'tha', 'THA.LOC104813100' => 'tha', 'THA.LOC104814215' => 'tha', 'THA.LOC104815554' => 'tha', 'THA.LOC104820544' => 'tha', 'THA.LOC104824754' => 'tha', 'THA.LOC104827717' => 'tha', 'Thecc.02G031400' => 'tca', 'Thecc.02G055900' => 'tca', 'Thecc.02G350800' => 'tca', 'Thecc.06G150900' => 'tca', 'Thecc.06G186600' => 'tca', 'Thecc.07G089600' => 'tca', 'Thecc.08G020400' => 'tca', 'Thecc.08G182100' => 'tca', 'Thhalv10000873m.g' => 'esa', 'Thhalv10004185m.g' => 'esa', 'Thhalv10006981m.g' => 'esa', 'Thhalv10007204m.g' => 'esa', 'Thhalv10011374m.g' => 'esa', 'Thhalv10013482m.g' => 'esa', 'Thhalv10017801m.g' => 'esa', 'Thhalv10024983m.g' => 'esa', 'TPR.G12072' => 'tpr', 'TPR.G15769' => 'tpr', 'TPR.G16504' => 'tpr', 'TPR.G16506' => 'tpr', 'TPR.G24345' => 'tpr', 'TPR.G26666' => 'tpr', 'TPR.G27320' => 'tpr', 'TPR.G31819' => 'tpr', 'TPR.G38879' => 'tpr', 'TPR.G39015' => 'tpr', 'TPR.G8819' => 'tpr', 'TWI09G0924' => 'twi', 'TWI12G0811' => 'twi', 'TWI12G1294' => 'twi', 'TWI31G0150' => 'twi', 'TWI36G1262' => 'twi', 'TWI38G1287' => 'twi', 'TWI38G1633' => 'twi', 'TWI38G1982' => 'twi', 'TWI39G0116' => 'twi', 'TWI60G1011' => 'twi', 'TWI63G0171' => 'twi', 'TWI73G0839' => 'twi', 'TWI79G1511' => 'twi', 'unitig_0.g915' => 'ugi', 'unitig_0.g916' => 'ugi', 'unitig_21.g20219' => 'ugi', 'unitig_21.g20416' => 'ugi', 'unitig_578.g16132' => 'ugi', 'unitig_578.g16718' => 'ugi', 'unitig_62.g23481' => 'ugi', 'unitig_744.g24535' => 'ugi', 'unitig_749.g13525' => 'ugi', 'vmacro01248' => 'vma', 'vmacro02290' => 'vma', 'vmacro10946' => 'vma', 'vmacro11865' => 'vma', 'vmacro12493' => 'vma', 'vmacro17322' => 'vma', 'vmacro21599' => 'vma', 'vmacro23041' => 'vma', 'VMungo0251G0004' => 'vmu', 'VMungo0251G2639' => 'vmu', 'VMungo0251G2967' => 'vmu', 'VMungo0540G0864' => 'vmu', 'VMungo0540G1569' => 'vmu', 'VMungo0647G0317' => 'vmu', 'VMungo0720G1373' => 'vmu', 'VMungo0720G1508' => 'vmu', 'VMungo1080G0485' => 'vmu', 'VMungo1215G3177' => 'vmu', 'Zm00001eb112600' => 'zma', 'Zm00001eb120220' => 'zma', 'Zm00001eb153240' => 'zma', 'Zm00001eb168880' => 'zma', 'Zm00001eb213920' => 'zma', 'Zm00001eb228280' => 'zma', 'Zm00001eb254580' => 'zma', 'Zm00001eb272180' => 'zma', 'Zm00001eb293190' => 'zma', 'Zm00001eb322930' => 'zma', 'Zm00001eb353360' => 'zma', 'Zm00001eb353390' => 'zma', 'Zm00001eb353430' => 'zma', 'Zm00001eb353440' => 'zma', 'Zm00001eb353780' => 'zma' ) $gf_id = 'HOM05D000499' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000499' ) $data_identifier = 'HOM05D000499' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 29, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 12, 'amhyb' => (int) 8, 'aly' => (int) 12, 'aox' => (int) 9, 'arhy' => (int) 26, 'ath' => (int) 8, 'atr' => (int) 7, 'acertr' => (int) 10, 'cqu' => (int) 15, 'bca' => (int) 29, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 11, 'cansat' => (int) 8, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 9, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 8, 'cpa' => (int) 10, 'csa' => (int) 7, 'camsi' => (int) 20, 'dca' => (int) 8, 'din' => (int) 12, 'dzi' => (int) 14, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 6, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 38, 'gra' => (int) 16, 'vvi' => (int) 8, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 5, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 11, 'lja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 11, 'mpo' => (int) 3, 'mbi' => (int) 14, 'mdo' => (int) 14, 'mtr' => (int) 8, 'cme' => (int) 9, 'egut' => (int) 9, 'ama' => (int) 11, 'nta' => (int) 17, 'nnu' => (int) 11, 'oeu' => (int) 18, 'osa' => (int) 8, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 6, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 9, 'rsi' => (int) 9, 'sbr' => (int) 10, 'sbo' => (int) 8, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 10, 'sas' => (int) 10, 'shi' => (int) 6, 'smo' => (int) 7, 'sly' => (int) 14, 'spe' => (int) 10, 'spa' => (int) 8, 'tar' => (int) 19, 'tha' => (int) 10, 'tca' => (int) 8, 'esa' => (int) 8, 'tpr' => (int) 11, 'twi' => (int) 13, 'ugi' => (int) 9, 'vma' => (int) 8, 'vmu' => (int) 10, 'zma' => (int) 15 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb353780' $species_info = array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ) $local_species = 'dca' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000499', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1066', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p29780' => 'bna', 'A02p33180' => 'bna', 'A03p16470' => 'bna', 'A03p66010' => 'bna', 'A04p25970' => 'bna', 'A06p01270' => 'bna', 'A06p46080' => 'bna', 'A07p11400' => 'bna', 'A08p01840' => 'bna', 'A08p08230' => 'bna', 'A08p25740' => 'bna', 'A09p32070' => 'bna', 'A09p37830' => 'bna', 'A09p42840' => 'bna', 'A09p42850' => 'bna', 'Aa31LG10G2060' => 'aar', 'Aa31LG2G7410' => 'aar', 'Aa31LG6G10200' => 'aar', 'Aa31LG6G16680' => 'aar', 'Aa31LG6G8470' => 'aar', 'Aa31LG9G12730' => 'aar', 'Aa31LG9G13680' => 'aar', 'Aa31LG9G14920' => 'aar', 'Aa31LG9G6650' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4977' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5467' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3254' => 'aag', 'Actinidia02578' => 'ach', 'Actinidia07693' => 'ach', 'Actinidia08413' => 'ach', 'Actinidia08414' => 'ach', 'Actinidia15289' => 'ach', 'Actinidia19871' => 'ach', 'Actinidia21475' => 'ach', 'Actinidia22576' => 'ach', 'Actinidia28327' => 'ach', 'Actinidia32491' => 'ach', 'Actinidia39463' => 'ach', 'Actinidia39571' => 'ach', 'Ah.01g013750' => 'amhyb', 'Ah.01g023210' => 'amhyb', 'Ah.04g164850' => 'amhyb', 'Ah.05g178060' => 'amhyb', 'Ah.07g204270' => 'amhyb', 'Ah.07g208480' => 'amhyb', 'Ah.09g237410' => 'amhyb', 'Ah.14g089460' => 'amhyb', 'AL1G41790' => 'aly', 'AL1G49050' => 'aly', 'AL1G53810' => 'aly', 'AL1G61400' => 'aly', 'AL4G18580' => 'aly', 'AL5G12510' => 'aly', 'AL5G12540' => 'aly', 'AL6G43230' => 'aly', 'AL7G10370' => 'aly', 'AL7G19250' => 'aly', 'AL8G12240' => 'aly', 'AL8G18540' => 'aly', 'Aqoxy1G02409' => 'aox', 'Aqoxy2G03993' => 'aox', 'Aqoxy3G03357' => 'aox', 'Aqoxy4G00785' => 'aox', 'Aqoxy5G02598' => 'aox', 'Aqoxy6G00132' => 'aox', 'Aqoxy7G01776' => 'aox', 'Aqoxy7G02316' => 'aox', 'Aqoxy7G03973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.12AFKW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B8730' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27IQR1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3F75VG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3RE0GA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41TCQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.527VTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FIR39' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5W8UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DA38EV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ63HS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H1I32C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HC27T5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4M8AP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7N3CZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9UVDZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LS1NQA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT1D4B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SKC4TM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCFV76' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF9Q1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQWD9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1ZM88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WE07RT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YCK7VH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJE6Q6' => 'arhy', 'AT1G28240' => 'ath', 'AT1G34550' => 'ath', 'AT1G53040' => 'ath', 'AT2G02910' => 'ath', 'AT4G09630' => 'ath', 'AT4G38500' => 'ath', 'AT5G42660' => 'ath', 'AT5G46220' => 'ath', 'ATR0152G026' => 'atr', 'ATR0564G343' => 'atr', 'ATR0706G151' => 'atr', 'ATR0733G207' => 'atr', 'ATR0751G234' => 'atr', 'ATR0807G048' => 'atr', 'ATR1091G084' => 'atr', 'Atru.chr10.1229' => 'acertr', 'Atru.chr10.1230' => 'acertr', 'Atru.chr10.1874' => 'acertr', 'Atru.chr11.1808' => 'acertr', 'Atru.chr13.1795' => 'acertr', 'Atru.chr13.570' => 'acertr', 'Atru.chr2.2608' => 'acertr', 'Atru.chr2.2609' => 'acertr', 'Atru.chr5.3428' => 'acertr', 'Atru.chr8.1171' => 'acertr', 'AUR62004651' => 'cqu', 'AUR62008675' => 'cqu', 'AUR62010014' => 'cqu', 'AUR62013004' => 'cqu', 'AUR62014825' => 'cqu', 'AUR62015015' => 'cqu', 'AUR62015151' => 'cqu', 'AUR62017020' => 'cqu', 'AUR62019422' => 'cqu', 'AUR62023570' => 'cqu', 'AUR62025571' => 'cqu', 'AUR62029098' => 'cqu', 'AUR62033863' => 'cqu', 'AUR62034296' => 'cqu', 'AUR62040075' => 'cqu', 'BcaB02g07334' => 'bca', 'BcaB02g10575' => 'bca', 'BcaB03g12119' => 'bca', 'BcaB03g12120' => 'bca', 'BcaB03g13945' => 'bca', 'BcaB04g17123' => 'bca', 'BcaB04g17867' => 'bca', 'BcaB04g19839' => 'bca', 'BcaB07g30317' => 'bca', 'BcaB07g32432' => 'bca', 'BcaB07g33362' => 'bca', 'BcaB08g36611' => 'bca', 'BcaC01g00028' => 'bca', 'BcaC01g01356' => 'bca', 'BcaC01g02034' => 'bca', 'BcaC01g06051' => 'bca', 'BcaC03g16839' => 'bca', 'BcaC03g17176' => 'bca', 'BcaC05g26829' => 'bca', 'BcaC06g31490' => 'bca', 'BcaC06g35344' => 'bca', 'BcaC06g36570' => 'bca', 'BcaC07g37537' => 'bca', 'BcaC08g43491' => 'bca', 'BcaC08g43773' => 'bca', 'BcaNung00234' => 'bca', 'BcaNung01982' => 'bca', 'BcaNung03707' => 'bca', 'BcaNung06454' => 'bca', 'BolC2t10762H' => 'bol', 'BolC2t11191H' => 'bol', 'BolC3t14322H' => 'bol', 'BolC3t19747H' => 'bol', 'BolC3t21425H' => 'bol', 'BolC4t27800H' => 'bol', 'BolC5t31423H' => 'bol', 'BolC6t35951H' => 'bol', 'BolC6t36282H' => 'bol', 'BolC7t40678H' => 'bol', 'BolC7t40679H' => 'bol', 'BolC7t42222H' => 'bol', 'BolC7t43492H' => 'bol', 'BolC7t46785H' => 'bol', 'BolC8t47853H' => 'bol', 'BolC9t56805H' => 'bol', 'BraA02t08000Z' => 'bra', 'BraA02t08341Z' => 'bra', 'BraA03t10936Z' => 'bra', 'BraA03t15657Z' => 'bra', 'BraA04t18100Z' => 'bra', 'BraA05t20523Z' => 'bra', 'BraA06t23353Z' => 'bra', 'BraA06t27473Z' => 'bra', 'BraA06t27769Z' => 'bra', 'BraA07t28928Z' => 'bra', 'BraA08t32236Z' => 'bra', 'BraA08t32841Z' => 'bra', 'BraA08t34524Z' => 'bra', 'BraA09t38742Z' => 'bra', 'BraA09t39295Z' => 'bra', 'C02p47180' => 'bna', 'C02p50990' => 'bna', 'C03p19360' => 'bna', 'C03p74950' => 'bna', 'C03p91000' => 'bna', 'C04p63260' => 'bna', 'C05p27050' => 'bna', 'C06p08750' => 'bna', 'C06p11490' => 'bna', 'C07p02820' => 'bna', 'C07p17180' => 'bna', 'C07p29440' => 'bna', 'C07p63730' => 'bna', 'C09p39260' => 'bna', 'CAN.G1164.34' => 'can', 'CAN.G1164.39' => 'can', 'CAN.G1530.3' => 'can', 'CAN.G162.61' => 'can', 'CAN.G176.6' => 'can', 'CAN.G289.49' => 'can', 'CAN.G370.21' => 'can', 'CAN.G370.22' => 'can', 'CAN.G371.117' => 'can', 'CAN.G58.37' => 'can', 'CAN.G588.98' => 'can', 'CANSAT21G2266' => 'cansat', 'CANSAT25G2799' => 'cansat', 'CANSAT35G0862' => 'cansat', 'CANSAT35G1704' => 'cansat', 'CANSAT35G1760' => 'cansat', 'CANSAT56G3971' => 'cansat', 'CANSAT56G4116' => 'cansat', 'CANSAT80G1259' => 'cansat', 'CARHR027730' => 'chi', 'CARHR033880' => 'chi', 'CARHR043270' => 'chi', 'CARHR145330' => 'chi', 'CARHR145340' => 'chi', 'CARHR175570' => 'chi', 'CARHR181570' => 'chi', 'CARHR258470' => 'chi', 'CARHR260490' => 'chi', 'CARHR294220' => 'chi', 'Carub.0001s2668' => 'cru', 'Carub.0001s3257' => 'cru', 'Carub.0001s4220' => 'cru', 'Carub.0005s0179' => 'cru', 'Carub.0006s2807' => 'cru', 'Carub.0007s0039' => 'cru', 'Carub.0008s0169' => 'cru', 'Carub.0008s0636' => 'cru', 'Ca_00338_v3' => 'car', 'Ca_00542_v3' => 'car', 'Ca_01844_v3' => 'car', 'Ca_10611_v3' => 'car', 'Ca_13326_v3' => 'car', 'Ca_17944_v3' => 'car', 'Ca_18546_v3' => 'car', 'Ca_24219_v3' => 'car', 'Ca_29972_v3' => 'car', 'CBR_g3681' => 'cbr', 'CBR_g40021' => 'cbr', 'Cc01_g08140' => 'ccan', 'Cc02_g13410' => 'ccan', 'Cc02_g37480' => 'ccan', 'Cc05_g12030' => 'ccan', 'Cc09_g03370' => 'ccan', 'Cc09_g10300' => 'ccan', 'Cc10_g03530' => 'ccan', 'Cc10_g11380' => 'ccan', 'CDE01G0176' => 'cde', 'CDE02G0675' => 'cde', 'CDE02G0942' => 'cde', 'CDE02G1153' => 'cde', 'CDE02G4177' => 'cde', 'CDE04G2117' => 'cde', 'CDE04G2736' => 'cde', 'CDE08G1161' => 'cde', 'CDE09G1238' => 'cde', 'Cfa000467' => 'cfa', 'Cfa000947' => 'cfa', 'Cfa004969' => 'cfa', 'Cfa005284' => 'cfa', 'Cfa008993' => 'cfa', 'Cfa018187' => 'cfa', 'Cfa018454' => 'cfa', 'Cfa020585' => 'cfa', 'Ciclev10000424m.g' => 'ccl', 'Ciclev10003605m.g' => 'ccl', 'Ciclev10007828m.g' => 'ccl', 'Ciclev10014620m.g' => 'ccl', 'Ciclev10015169m.g' => 'ccl', 'Ciclev10018291m.g' => 'ccl', 'Ciclev10028256m.g' => 'ccl', 'Ciclev10033822m.g' => 'ccl', 'CiPaw.05G060300' => 'cil', 'CiPaw.05G085000' => 'cil', 'CiPaw.06G083700' => 'cil', 'CiPaw.06G120300' => 'cil', 'CiPaw.09G060500' => 'cil', 'CiPaw.09G123800' => 'cil', 'CiPaw.11G169700' => 'cil', 'CiPaw.12G118300' => 'cil', 'CiPaw.15G071000' => 'cil', 'CiPaw.15G081900' => 'cil', 'ClCG01G024610' => 'cla', 'ClCG03G006070' => 'cla', 'ClCG05G019250' => 'cla', 'ClCG09G009500' => 'cla', 'ClCG11G008200' => 'cla', 'ClCG11G018080' => 'cla', 'COL.COLO4_17373' => 'col', 'COL.COLO4_22994' => 'col', 'COL.COLO4_26389' => 'col', 'COL.COLO4_27170' => 'col', 'COL.COLO4_31074' => 'col', 'COL.COLO4_31465' => 'col', 'COL.COLO4_36438' => 'col', 'COL.COLO4_36439' => 'col', 'Cpa.g.c38781' => 'cpa', 'Cpa.g.sc128.12' => 'cpa', 'Cpa.g.sc166.7' => 'cpa', 'Cpa.g.sc166.8' => 'cpa', 'Cpa.g.sc20.111' => 'cpa', 'Cpa.g.sc27.31' => 'cpa', 'Cpa.g.sc64.36' => 'cpa', 'Cpa.g.sc64.37' => 'cpa', 'Cpa.g.sc66.49' => 'cpa', 'Cpa.g.sc80.64' => 'cpa', 'CsaV3_1G012320' => 'csa', 'CsaV3_2G008480' => 'csa', 'CsaV3_2G033450' => 'csa', 'CsaV3_3G044830' => 'csa', 'CsaV3_4G033710' => 'csa', 'CsaV3_6G051730' => 'csa', 'CsaV3_7G025350' => 'csa', 'CSS0001067' => 'camsi', 'CSS0005996' => 'camsi', 'CSS0006590' => 'camsi', 'CSS0009673' => 'camsi', 'CSS0010201' => 'camsi', 'CSS0010549' => 'camsi', 'CSS0011364' => 'camsi', 'CSS0014473' => 'camsi', 'CSS0014961' => 'camsi', 'CSS0020191' => 'camsi', 'CSS0021165' => 'camsi', 'CSS0022306' => 'camsi', 'CSS0030591' => 'camsi', 'CSS0030696' => 'camsi', 'CSS0032653' => 'camsi', 'CSS0037487' => 'camsi', 'CSS0041102' => 'camsi', 'CSS0041261' => 'camsi', 'CSS0046246' => 'camsi', 'CSS0049256' => 'camsi', 'DCAR_004075' => 'dca', 'DCAR_011538' => 'dca', 'DCAR_019553' => 'dca', 'DCAR_020952' => 'dca', 'DCAR_021739' => 'dca', 'DCAR_027407' => 'dca', 'DCAR_027913' => 'dca', 'DCAR_028066' => 'dca', 'Dinv05899' => 'din', 'Dinv07563' => 'din', 'Dinv08010' => 'din', 'Dinv14125' => 'din', 'Dinv20172' => 'din', 'Dinv30743' => 'din', 'Dinv31229' => 'din', 'Dinv34162' => 'din', 'Dinv36028' => 'din', 'Dinv39368' => 'din', 'Dinv40565' => 'din', 'Dinv41706' => 'din', 'Duzib052G0089' => 'dzi', 'Duzib116G0641' => 'dzi', 'Duzib132G0069' => 'dzi', 'Duzib132G1219' => 'dzi', 'Duzib147G0278' => 'dzi', 'Duzib160G0480' => 'dzi', 'Duzib170G0661' => 'dzi', 'Duzib177G0591' => 'dzi', 'Duzib187G1353' => 'dzi', 'Duzib192G0858' => 'dzi', 'Duzib192G0883' => 'dzi', 'Duzib213G0506' => 'dzi', 'Duzib235G0289' => 'dzi', 'Duzib251G0422' => 'dzi', 'ECA232G3898' => 'eca', 'ECA233G5950' => 'eca', 'ECA234G1699' => 'eca', 'ECA234G2421' => 'eca', 'ECA236G0426' => 'eca', 'ECA236G4331' => 'eca', 'ECA248G2573' => 'eca', 'EL10Ac1g00077' => 'bvu', 'EL10Ac1g01746' => 'bvu', 'EL10Ac2g03464' => 'bvu', 'EL10Ac4g08176' => 'bvu', 'EL10Ac7g17521' => 'bvu', 'EL10Ac8g20386' => 'bvu', 'EL10Ac9g21343' => 'bvu', 'EL10Ac9g22688' => 'bvu', 'Eucgr.B03434' => 'egr', 'Eucgr.D00618' => 'egr', 'Eucgr.E02395' => 'egr', 'Eucgr.F01129' => 'egr', 'Eucgr.F02622' => 'egr', 'Eucgr.F04207' => 'egr', 'FAN01G0570' => 'fan', 'FAN03G3351' => 'fan', 'FAN06G3702' => 'fan', 'FAN07G2149' => 'fan', 'FAN10G3758' => 'fan', 'FAN11G1170' => 'fan', 'FAN11G2050' => 'fan', 'FAN11G2724' => 'fan', 'FAN12G1700' => 'fan', 'FAN12G2028' => 'fan', 'FAN15G1160' => 'fan', 'FAN15G3063' => 'fan', 'FAN16G2540' => 'fan', 'FAN16G3077' => 'fan', 'FAN16G3624' => 'fan', 'FAN17G0221' => 'fan', 'FAN20G2492' => 'fan', 'FAN20G2905' => 'fan', 'FAN21G0548' => 'fan', 'FAN21G1300' => 'fan', 'FAN22G0077' => 'fan', 'FAN22G1315' => 'fan', 'FAN24G1280' => 'fan', 'FAN24G1445' => 'fan', 'FAN24G3527' => 'fan', 'FAN25G0464' => 'fan', 'FAN25G2885' => 'fan', 'FAN25G3270' => 'fan', 'FAN27G1101' => 'fan', 'FAN27G2846' => 'fan', 'FAN27G3524' => 'fan', 'FvH4_2g11770' => 'fve', 'FvH4_2g15630' => 'fve', 'FvH4_3g05570' => 'fve', 'FvH4_3g09110' => 'fve', 'FvH4_3g19940' => 'fve', 'FvH4_4g04821' => 'fve', 'FvH4_4g31480' => 'fve', 'FvH4_7g01740' => 'fve', 'Glyma.05G130400' => 'gma', 'Glyma.05G156400' => 'gma', 'Glyma.07G197000' => 'gma', 'Glyma.08G085151' => 'gma', 'Glyma.08G114500' => 'gma', 'Glyma.08G300400' => 'gma', 'Glyma.10G215800' => 'gma', 'Glyma.12G224400' => 'gma', 'Glyma.13G179300' => 'gma', 'Glyma.13G218151' => 'gma', 'Glyma.13G238800' => 'gma', 'Glyma.13G276900' => 'gma', 'Glyma.14G078200' => 'gma', 'Glyma.15G074500' => 'gma', 'Glyma.15G094100' => 'gma', 'Glyma.17G247200' => 'gma', 'Glyma.18G120100' => 'gma', 'Glyma.20G176000' => 'gma', 'Gohir.A01G063600' => 'ghi', 'Gohir.A01G170301' => 'ghi', 'Gohir.A02G060500' => 'ghi', 'Gohir.A05G133850' => 'ghi', 'Gohir.A05G161400' => 'ghi', 'Gohir.A06G012900' => 'ghi', 'Gohir.A06G035901' => 'ghi', 'Gohir.A06G127100' => 'ghi', 'Gohir.A06G210500' => 'ghi', 'Gohir.A08G008650' => 'ghi', 'Gohir.A09G072700' => 'ghi', 'Gohir.A09G088301' => 'ghi', 'Gohir.A10G040600' => 'ghi', 'Gohir.A12G036300' => 'ghi', 'Gohir.A12G143350' => 'ghi', 'Gohir.A12G165500' => 'ghi', 'Gohir.A13G145700' => 'ghi', 'Gohir.D01G050000' => 'ghi', 'Gohir.D01G051366' => 'ghi', 'Gohir.D01G161350' => 'ghi', 'Gohir.D02G065900' => 'ghi', 'Gohir.D05G164200' => 'ghi', 'Gohir.D05G355500' => 'ghi', 'Gohir.D06G010400' => 'ghi', 'Gohir.D06G111250' => 'ghi', 'Gohir.D06G132000' => 'ghi', 'Gohir.D06G210500' => 'ghi', 'Gohir.D07G165675' => 'ghi', 'Gohir.D08G062240' => 'ghi', 'Gohir.D08G086101' => 'ghi', 'Gohir.D08G138060' => 'ghi', 'Gohir.D09G072300' => 'ghi', 'Gohir.D10G041400' => 'ghi', 'Gohir.D11G191020' => 'ghi', 'Gohir.D11G212066' => 'ghi', 'Gohir.D12G036300' => 'ghi', 'Gohir.D12G168600' => 'ghi', 'Gohir.D13G150600' => 'ghi', 'Gorai.001G057300' => 'gra', 'Gorai.002G069900' => 'gra', 'Gorai.002G200000' => 'gra', 'Gorai.003G067600' => 'gra', 'Gorai.005G074800' => 'gra', 'Gorai.006G087300' => 'gra', 'Gorai.008G037500' => 'gra', 'Gorai.008G181400' => 'gra', 'Gorai.009G169400' => 'gra', 'Gorai.009G387900' => 'gra', 'Gorai.010G013300' => 'gra', 'Gorai.010G153800' => 'gra', 'Gorai.010G255800' => 'gra', 'Gorai.011G043700' => 'gra', 'Gorai.011G198900' => 'gra', 'Gorai.013G168400' => 'gra', 'GSVIVG01005212001' => 'vvi', 'GSVIVG01006163001' => 'vvi', 'GSVIVG01009625001' => 'vvi', 'GSVIVG01014338001' => 'vvi', 'GSVIVG01020005001' => 'vvi', 'GSVIVG01021450001' => 'vvi', 'GSVIVG01023975001' => 'vvi', 'GSVIVG01034490001' => 'vvi', 'HanXRQChr04g0112071' => 'han', 'HanXRQChr05g0131151' => 'han', 'HanXRQChr09g0262371' => 'han', 'HanXRQChr09g0268401' => 'han', 'HanXRQChr10g0279241' => 'han', 'HanXRQChr10g0297961' => 'han', 'HanXRQChr11g0326231' => 'han', 'HanXRQChr11g0328471' => 'han', 'HanXRQChr16g0507941' => 'han', 'HanXRQChr17g0560211' => 'han', 'Haze_02108' => 'cav', 'Haze_02428' => 'cav', 'Haze_05593' => 'cav', 'Haze_06448' => 'cav', 'Haze_09427' => 'cav', 'Haze_12022' => 'cav', 'Haze_17612' => 'cav', 'Haze_17928' => 'cav', 'Hma1.2p1_0032F.1_g019250' => 'hma', 'Hma1.2p1_0163F.1_g072690' => 'hma', 'Hma1.2p1_0265F.1_g106710' => 'hma', 'Hma1.2p1_0286F.1_g113970' => 'hma', 'Hma1.2p1_0363F.1_g136640' => 'hma', 'Hma1.2p1_0584F.1_g183470' => 'hma', 'Hma1.2p1_0885F.1_g232570' => 'hma', 'HPP92_006022' => 'vpl', 'HPP92_007320' => 'vpl', 'HPP92_011521' => 'vpl', 'HPP92_019387' => 'vpl', 'HPP92_024038' => 'vpl', 'Hund05891' => 'sun', 'Hund06450' => 'sun', 'Hund12053' => 'sun', 'Hund16800' => 'sun', 'Hund21222' => 'sun', 'Hund22896' => 'sun', 'Hund23746' => 'sun', 'Hund27083' => 'sun', 'Lalb_Chr02g0141831' => 'lal', 'Lalb_Chr02g0141841' => 'lal', 'Lalb_Chr05g0220411' => 'lal', 'Lalb_Chr06g0162081' => 'lal', 'Lalb_Chr09g0327651' => 'lal', 'Lalb_Chr13g0295051' => 'lal', 'Lalb_Chr15g0086801' => 'lal', 'Lalb_Chr16g0383781' => 'lal', 'Lalb_Chr16g0383791' => 'lal', 'Lalb_Chr18g0055441' => 'lal', 'Lalb_Chr18g0059611' => 'lal', 'Lalb_Chr20g0109661' => 'lal', 'Lalb_Chr20g0109831' => 'lal', 'Lalb_Chr20g0121871' => 'lal', 'Lalb_Chr22g0355361' => 'lal', 'Lalb_Chr25g0286371' => 'lal', 'Lj1A1187G43' => 'lonja', 'Lj1A1205T50' => 'lonja', 'Lj1A800G33' => 'lonja', 'Lj1C1187T7' => 'lonja', 'Lj1C843T11' => 'lonja', 'Lj1g0010940' => 'lja', 'Lj2A288T69' => 'lonja', 'Lj3g0024276' => 'lja', 'Lj4A47T76' => 'lonja', 'Lj4g0005805' => 'lja', 'Lj4g0006097' => 'lja', 'Lj4g0008528' => 'lja', 'Lj4g0024907' => 'lja', 'Lj5g0012472' => 'lja', 'Lj5g0018648' => 'lja', 'Lj6C789G1' => 'lonja', 'Lj6g0004000' => 'lja', 'Lj7A292G67' => 'lonja', 'Lj7A292T64' => 'lonja', 'Lj9A400T58' => 'lonja', 'Lsat_1_v5_gn_1_126181' => 'lsa', 'Lsat_1_v5_gn_4_123041' => 'lsa', 'Lsat_1_v5_gn_4_133620' => 'lsa', 'Lsat_1_v5_gn_4_53221' => 'lsa', 'Lsat_1_v5_gn_4_71961' => 'lsa', 'Lsat_1_v5_gn_7_105241' => 'lsa', 'Lsat_1_v5_gn_7_21361' => 'lsa', 'Lsat_1_v5_gn_7_28860' => 'lsa', 'Lsat_1_v5_gn_7_31260' => 'lsa', 'Lsat_1_v5_gn_8_52801' => 'lsa', 'Manes.02G191400' => 'mes', 'Manes.03G110100' => 'mes', 'Manes.04G071100' => 'mes', 'Manes.05G100500' => 'mes', 'Manes.05G164700' => 'mes', 'Manes.15G087000' => 'mes', 'Manes.15G121500' => 'mes', 'Manes.16G028300' => 'mes', 'Manes.17G046100' => 'mes', 'Manes.17G069800' => 'mes', 'Manes.18G100500' => 'mes', 'Mapoly0002s0109' => 'mpo', 'Mapoly0024s0007' => 'mpo', 'Mapoly0089s0032' => 'mpo', 'MBI04_g42241_MAGBIO' => 'mbi', 'MBI05_g11988_MAGBIO' => 'mbi', 'MBI05_g35452_MAGBIO' => 'mbi', 'MBI07_g30179_MAGBIO' => 'mbi', 'MBI07_g35859_MAGBIO' => 'mbi', 'MBI07_g35860_MAGBIO' => 'mbi', 'MBI07_g37166_MAGBIO' => 'mbi', 'MBI08_g18172_MAGBIO' => 'mbi', 'MBI09_g08441_MAGBIO' => 'mbi', 'MBI13_g01676_MAGBIO' => 'mbi', 'MBI14_g42955_MAGBIO' => 'mbi', 'MBI16_g13161_MAGBIO' => 'mbi', 'MBI17_g27204_MAGBIO' => 'mbi', 'MBI19_g21595_MAGBIO' => 'mbi', 'MD00G1148400' => 'mdo', 'MD02G1301200' => 'mdo', 'MD03G1227800' => 'mdo', 'MD05G1041100' => 'mdo', 'MD05G1124800' => 'mdo', 'MD05G1284000' => 'mdo', 'MD05G1338800' => 'mdo', 'MD05G1338900' => 'mdo', 'MD07G1022800' => 'mdo', 'MD10G1047500' => 'mdo', 'MD10G1127500' => 'mdo', 'MD10G1262300' => 'mdo', 'MD10G1293800' => 'mdo', 'MD16G1074300' => 'mdo', 'Medtr1g021670' => 'mtr', 'Medtr1g096320' => 'mtr', 'Medtr2g013690' => 'mtr', 'Medtr2g019450' => 'mtr', 'Medtr2g085170' => 'mtr', 'Medtr4g088785' => 'mtr', 'Medtr8g055930' => 'mtr', 'Medtr8g085850' => 'mtr', 'MELO3C002605.2' => 'cme', 'MELO3C003891.2' => 'cme', 'MELO3C004012.2' => 'cme', 'MELO3C007134.2' => 'cme', 'MELO3C008118.2' => 'cme', 'MELO3C016700.2' => 'cme', 'MELO3C024127.2' => 'cme', 'MELO3C033361.2' => 'cme', 'MELO3C033362.2' => 'cme', 'Migut.C00430' => 'egut', 'Migut.C01246' => 'egut', 'Migut.E00101' => 'egut', 'Migut.H01486' => 'egut', 'Migut.H01939' => 'egut', 'Migut.K00360' => 'egut', 'Migut.M00910' => 'egut', 'Migut.M01139' => 'egut', 'Migut.N02677' => 'egut', 'MSTRG.13252' => 'ama', 'MSTRG.14701' => 'ama', 'MSTRG.1521' => 'ama', 'MSTRG.15884' => 'ama', 'MSTRG.16242' => 'ama', 'MSTRG.22285' => 'ama', 'MSTRG.22444' => 'ama', 'MSTRG.2349' => 'ama', 'MSTRG.26308' => 'ama', 'MSTRG.28296' => 'ama', 'MSTRG.9895' => 'ama', 'Nitab4.5_0000110g0060' => 'nta', 'Nitab4.5_0000420g0130' => 'nta', 'Nitab4.5_0000422g0030' => 'nta', 'Nitab4.5_0000560g0180' => 'nta', 'Nitab4.5_0000703g0100' => 'nta', 'Nitab4.5_0000786g0200' => 'nta', 'Nitab4.5_0001336g0020' => 'nta', 'Nitab4.5_0001796g0030' => 'nta', 'Nitab4.5_0003348g0060' => 'nta', 'Nitab4.5_0003698g0040' => 'nta', 'Nitab4.5_0003942g0090' => 'nta', 'Nitab4.5_0004775g0070' => 'nta', 'Nitab4.5_0004864g0030' => 'nta', 'Nitab4.5_0005615g0020' => 'nta', 'Nitab4.5_0009288g0030' => 'nta', 'Nitab4.5_0009341g0010' => 'nta', 'Nitab4.5_0009535g0010' => 'nta', 'Nn1g03995' => 'nnu', 'Nn1g04100' => 'nnu', 'Nn1g06530' => 'nnu', 'Nn3g16404' => 'nnu', 'Nn3g17212' => 'nnu', 'Nn3g20776' => 'nnu', 'Nn3g21923' => 'nnu', 'Nn5g27737' => 'nnu', 'Nn5g29461' => 'nnu', 'Nn7g38355' => 'nnu', 'Nn8g39873' => 'nnu', 'Oeu000548.2' => 'oeu', 'Oeu004672.1' => 'oeu', 'Oeu015605.2' => 'oeu', 'Oeu016092.1' => 'oeu', 'Oeu017879.3' => 'oeu', 'Oeu024910.1' => 'oeu', 'Oeu028965.1' => 'oeu', 'Oeu031269.1' => 'oeu', 'Oeu031270.1' => 'oeu', 'Oeu032535.1' => 'oeu', 'Oeu034151.1' => 'oeu', 'Oeu034152.1' => 'oeu', 'Oeu034588.2' => 'oeu', 'Oeu050846.1' => 'oeu', 'Oeu050849.2' => 'oeu', 'Oeu051063.2' => 'oeu', 'Oeu052368.1' => 'oeu', 'Oeu052370.1' => 'oeu', 'Os01g0210400' => 'osa', 'Os01g0304300' => 'osa', 'Os01g0749100' => 'osa', 'Os02g0745800' => 'osa', 'Os03g0769050' => 'osa', 'Os05g0531500' => 'osa', 'Os06g0724300' => 'osa', 'Os11g0198100' => 'osa', 'Peaxi162Scf00069g01425' => 'pax', 'Peaxi162Scf00280g00811' => 'pax', 'Peaxi162Scf00310g00615' => 'pax', 'Peaxi162Scf00362g00542' => 'pax', 'Peaxi162Scf00461g00310' => 'pax', 'Peaxi162Scf00530g00118' => 'pax', 'Peaxi162Scf00541g00057' => 'pax', 'Peaxi162Scf00661g00017' => 'pax', 'Peaxi162Scf00926g00027' => 'pax', 'Peaxi162Scf01064g00263' => 'pax', 'Peaxi162Scf01211g00135' => 'pax', 'PGR004G2336' => 'pgr', 'PGR042G0327' => 'pgr', 'PGR042G1957' => 'pgr', 'PGR042G2003' => 'pgr', 'PGR042G3929' => 'pgr', 'PGR083G1137' => 'pgr', 'PGR083G1364' => 'pgr', 'PGSC0003DMG400003381' => 'stu', 'PGSC0003DMG400003417' => 'stu', 'PGSC0003DMG400008981' => 'stu', 'PGSC0003DMG400012417' => 'stu', 'PGSC0003DMG400012823' => 'stu', 'PGSC0003DMG400016885' => 'stu', 'PGSC0003DMG400022812' => 'stu', 'PGSC0003DMG400029726' => 'stu', 'PGSC0003DMG401009243' => 'stu', 'PGSC0003DMG401031505' => 'stu', 'PGSC0003DMG402031505' => 'stu', 'Phvul.001G017600' => 'pvu', 'Phvul.002G193500' => 'pvu', 'Phvul.002G228900' => 'pvu', 'Phvul.002G236800' => 'pvu', 'Phvul.003G049500' => 'pvu', 'Phvul.005G072000' => 'pvu', 'Phvul.006G164800' => 'pvu', 'Phvul.006G185100' => 'pvu', 'Phvul.007G090000' => 'pvu', 'Potri.001G399800' => 'ptr', 'Potri.002G149900' => 'ptr', 'Potri.004G044100' => 'ptr', 'Potri.004G177600' => 'ptr', 'Potri.009G138000' => 'ptr', 'Potri.010G094000' => 'ptr', 'Potri.011G053000' => 'ptr', 'Potri.011G119300' => 'ptr', 'Potri.013G113700' => 'ptr', 'Potri.018G107800' => 'ptr', 'Potri.019G084100' => 'ptr', 'Pp3c14_23720' => 'ppa', 'Pp3c16_6340' => 'ppa', 'Pp3c23_13420' => 'ppa', 'Pp3c24_2740' => 'ppa', 'Pp3c25_860' => 'ppa', 'Pp3c8_21750' => 'ppa', 'Prupe.1G273000' => 'ppe', 'Prupe.1G273700' => 'ppe', 'Prupe.1G274100' => 'ppe', 'Prupe.2G023300' => 'ppe', 'Prupe.4G048000' => 'ppe', 'Prupe.4G080400' => 'ppe', 'Prupe.4G181200' => 'ppe', 'Prupe.8G056900' => 'ppe', 'Prupe.8G168700' => 'ppe', 'Psat1g189080' => 'psa', 'Psat1g204760' => 'psa', 'Psat4g175560' => 'psa', 'Psat4g177720' => 'psa', 'Psat5g244240' => 'psa', 'Psat6g010720' => 'psa', 'Psat6g187200' => 'psa', 'Psat7g072040' => 'psa', 'PSO017G3501' => 'pso', 'PSO063G2148' => 'pso', 'PSO063G5608' => 'pso', 'PSO210G6392' => 'pso', 'PSO541G2319' => 'pso', 'PSO541G2836' => 'pso', 'PSO541G4012' => 'pso', 'PSO541G6253' => 'pso', 'PSO675G0580' => 'pso', 'PSO675G0856' => 'pso', 'PSO675G5635' => 'pso', 'PSO675G9157' => 'pso', 'PSO832G1660' => 'pso', 'PSO832G1969' => 'pso', 'QL02p007186' => 'qlo', 'QL02p033904' => 'qlo', 'QL03p064391' => 'qlo', 'QL05p040593' => 'qlo', 'QL05p058242' => 'qlo', 'QL08p021825' => 'qlo', 'QL11p004981' => 'qlo', 'RcHm_v2.0_Chr1g0318301' => 'rch', 'RcHm_v2.0_Chr4g0418501' => 'rch', 'RcHm_v2.0_Chr4g0439971' => 'rch', 'RcHm_v2.0_Chr5g0008541' => 'rch', 'RcHm_v2.0_Chr5g0014101' => 'rch', 'RcHm_v2.0_Chr5g0014131' => 'rch', 'RcHm_v2.0_Chr5g0033621' => 'rch', 'RcHm_v2.0_Chr6g0272041' => 'rch', 'RcHm_v2.0_Chr6g0278831' => 'rch', 'Rhsim02G0130400' => 'rsi', 'Rhsim02G0171100' => 'rsi', 'Rhsim05G0053000' => 'rsi', 'Rhsim05G0053100' => 'rsi', 'Rhsim06G0096500' => 'rsi', 'Rhsim06G0096600' => 'rsi', 'Rhsim06G0199100' => 'rsi', 'Rhsim12G0062300' => 'rsi', 'Rhsim12G0062800' => 'rsi', 'Sabra02G0118600' => 'sbr', 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'Solyc03g079860.2' => 'sly', 'Solyc04g079770.3' => 'sly', 'Solyc05g007430.4' => 'sly', 'Solyc07g063150.3' => 'sly', 'Solyc08g016620.3' => 'sly', 'Solyc09g057590.3' => 'sly', 'Solyc09g057600.1' => 'sly', 'Solyc10g009050.3' => 'sly', 'Solyc11g017420.2' => 'sly', 'Sopen01g053810' => 'spe', 'Sopen02g023040' => 'spe', 'Sopen03g002440' => 'spe', 'Sopen04g033350' => 'spe', 'Sopen05g003310' => 'spe', 'Sopen07g004050' => 'spe', 'Sopen07g031340' => 'spe', 'Sopen08g006990' => 'spe', 'Sopen10g004830' => 'spe', 'Sopen11g009370' => 'spe', 'Sp1g24450' => 'spa', 'Sp1g29670' => 'spa', 'Sp1g39600' => 'spa', 'Sp2g11080' => 'spa', 'Sp2g13970' => 'spa', 'Sp4g16130' => 'spa', 'Sp6g13080' => 'spa', 'Sp7g37270' => 'spa', 'TAR371G0065' => 'tar', 'TAR376G0340' => 'tar', 'TAR376G0435' => 'tar', 'TAR381G0002' => 'tar', 'TAR381G1236' => 'tar', 'TAR624G0055' => 'tar', 'TAR624G0324' => 'tar', 'TAR624G0696' => 'tar', 'TAR624G0906' => 'tar', 'TAR625G0107' => 'tar', 'TAR626G0015' => 'tar', 'TAR626G1356' => 'tar', 'TAR627G0888' => 'tar', 'TAR628G0399' => 'tar', 'TAR628G1327' => 'tar', 'TAR629G2831' => 'tar', 'TAR629G2874' => 'tar', 'TAR633G1432' => 'tar', 'TAR633G2771' => 'tar', 'THA.LOC104803394' => 'tha', 'THA.LOC104805153' => 'tha', 'THA.LOC104806784' => 'tha', 'THA.LOC104810473' => 'tha', 'THA.LOC104813100' => 'tha', 'THA.LOC104814215' => 'tha', 'THA.LOC104815554' => 'tha', 'THA.LOC104820544' => 'tha', 'THA.LOC104824754' => 'tha', 'THA.LOC104827717' => 'tha', 'Thecc.02G031400' => 'tca', 'Thecc.02G055900' => 'tca', 'Thecc.02G350800' => 'tca', 'Thecc.06G150900' => 'tca', 'Thecc.06G186600' => 'tca', 'Thecc.07G089600' => 'tca', 'Thecc.08G020400' => 'tca', 'Thecc.08G182100' => 'tca', 'Thhalv10000873m.g' => 'esa', 'Thhalv10004185m.g' => 'esa', 'Thhalv10006981m.g' => 'esa', 'Thhalv10007204m.g' => 'esa', 'Thhalv10011374m.g' => 'esa', 'Thhalv10013482m.g' => 'esa', 'Thhalv10017801m.g' => 'esa', 'Thhalv10024983m.g' => 'esa', 'TPR.G12072' => 'tpr', 'TPR.G15769' => 'tpr', 'TPR.G16504' => 'tpr', 'TPR.G16506' => 'tpr', 'TPR.G24345' => 'tpr', 'TPR.G26666' => 'tpr', 'TPR.G27320' => 'tpr', 'TPR.G31819' => 'tpr', 'TPR.G38879' => 'tpr', 'TPR.G39015' => 'tpr', 'TPR.G8819' => 'tpr', 'TWI09G0924' => 'twi', 'TWI12G0811' => 'twi', 'TWI12G1294' => 'twi', 'TWI31G0150' => 'twi', 'TWI36G1262' => 'twi', 'TWI38G1287' => 'twi', 'TWI38G1633' => 'twi', 'TWI38G1982' => 'twi', 'TWI39G0116' => 'twi', 'TWI60G1011' => 'twi', 'TWI63G0171' => 'twi', 'TWI73G0839' => 'twi', 'TWI79G1511' => 'twi', 'unitig_0.g915' => 'ugi', 'unitig_0.g916' => 'ugi', 'unitig_21.g20219' => 'ugi', 'unitig_21.g20416' => 'ugi', 'unitig_578.g16132' => 'ugi', 'unitig_578.g16718' => 'ugi', 'unitig_62.g23481' => 'ugi', 'unitig_744.g24535' => 'ugi', 'unitig_749.g13525' => 'ugi', 'vmacro01248' => 'vma', 'vmacro02290' => 'vma', 'vmacro10946' => 'vma', 'vmacro11865' => 'vma', 'vmacro12493' => 'vma', 'vmacro17322' => 'vma', 'vmacro21599' => 'vma', 'vmacro23041' => 'vma', 'VMungo0251G0004' => 'vmu', 'VMungo0251G2639' => 'vmu', 'VMungo0251G2967' => 'vmu', 'VMungo0540G0864' => 'vmu', 'VMungo0540G1569' => 'vmu', 'VMungo0647G0317' => 'vmu', 'VMungo0720G1373' => 'vmu', 'VMungo0720G1508' => 'vmu', 'VMungo1080G0485' => 'vmu', 'VMungo1215G3177' => 'vmu', 'Zm00001eb112600' => 'zma', 'Zm00001eb120220' => 'zma', 'Zm00001eb153240' => 'zma', 'Zm00001eb168880' => 'zma', 'Zm00001eb213920' => 'zma', 'Zm00001eb228280' => 'zma', 'Zm00001eb254580' => 'zma', 'Zm00001eb272180' => 'zma', 'Zm00001eb293190' => 'zma', 'Zm00001eb322930' => 'zma', 'Zm00001eb353360' => 'zma', 'Zm00001eb353390' => 'zma', 'Zm00001eb353430' => 'zma', 'Zm00001eb353440' => 'zma', 'Zm00001eb353780' => 'zma' ), 'gf_id' => 'HOM05D000499', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000499' ), 'data_identifier' => 'HOM05D000499', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000499', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1066', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p29780' => 'bna', 'A02p33180' => 'bna', 'A03p16470' => 'bna', 'A03p66010' => 'bna', 'A04p25970' => 'bna', 'A06p01270' => 'bna', 'A06p46080' => 'bna', 'A07p11400' => 'bna', 'A08p01840' => 'bna', 'A08p08230' => 'bna', 'A08p25740' => 'bna', 'A09p32070' => 'bna', 'A09p37830' => 'bna', 'A09p42840' => 'bna', 'A09p42850' => 'bna', 'Aa31LG10G2060' => 'aar', 'Aa31LG2G7410' => 'aar', 'Aa31LG6G10200' => 'aar', 'Aa31LG6G16680' => 'aar', 'Aa31LG6G8470' => 'aar', 'Aa31LG9G12730' => 'aar', 'Aa31LG9G13680' => 'aar', 'Aa31LG9G14920' => 'aar', 'Aa31LG9G6650' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4977' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5467' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3254' => 'aag', 'Actinidia02578' => 'ach', 'Actinidia07693' => 'ach', 'Actinidia08413' => 'ach', 'Actinidia08414' => 'ach', 'Actinidia15289' => 'ach', 'Actinidia19871' => 'ach', 'Actinidia21475' => 'ach', 'Actinidia22576' => 'ach', 'Actinidia28327' => 'ach', 'Actinidia32491' => 'ach', 'Actinidia39463' => 'ach', 'Actinidia39571' => 'ach', 'Ah.01g013750' => 'amhyb', 'Ah.01g023210' => 'amhyb', 'Ah.04g164850' => 'amhyb', 'Ah.05g178060' => 'amhyb', 'Ah.07g204270' => 'amhyb', 'Ah.07g208480' => 'amhyb', 'Ah.09g237410' => 'amhyb', 'Ah.14g089460' => 'amhyb', 'AL1G41790' => 'aly', 'AL1G49050' => 'aly', 'AL1G53810' => 'aly', 'AL1G61400' => 'aly', 'AL4G18580' => 'aly', 'AL5G12510' => 'aly', 'AL5G12540' => 'aly', 'AL6G43230' => 'aly', 'AL7G10370' => 'aly', 'AL7G19250' => 'aly', 'AL8G12240' => 'aly', 'AL8G18540' => 'aly', 'Aqoxy1G02409' => 'aox', 'Aqoxy2G03993' => 'aox', 'Aqoxy3G03357' => 'aox', 'Aqoxy4G00785' => 'aox', 'Aqoxy5G02598' => 'aox', 'Aqoxy6G00132' => 'aox', 'Aqoxy7G01776' => 'aox', 'Aqoxy7G02316' => 'aox', 'Aqoxy7G03973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.12AFKW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B8730' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27IQR1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3F75VG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3RE0GA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41TCQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.527VTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FIR39' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5W8UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DA38EV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ63HS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H1I32C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HC27T5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4M8AP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7N3CZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9UVDZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LS1NQA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT1D4B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SKC4TM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCFV76' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF9Q1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQWD9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1ZM88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WE07RT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YCK7VH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJE6Q6' => 'arhy', 'AT1G28240' => 'ath', 'AT1G34550' => 'ath', 'AT1G53040' => 'ath', 'AT2G02910' => 'ath', 'AT4G09630' => 'ath', 'AT4G38500' => 'ath', 'AT5G42660' => 'ath', 'AT5G46220' => 'ath', 'ATR0152G026' => 'atr', 'ATR0564G343' => 'atr', 'ATR0706G151' => 'atr', 'ATR0733G207' => 'atr', 'ATR0751G234' => 'atr', 'ATR0807G048' => 'atr', 'ATR1091G084' => 'atr', 'Atru.chr10.1229' => 'acertr', 'Atru.chr10.1230' => 'acertr', 'Atru.chr10.1874' => 'acertr', 'Atru.chr11.1808' => 'acertr', 'Atru.chr13.1795' => 'acertr', 'Atru.chr13.570' => 'acertr', 'Atru.chr2.2608' => 'acertr', 'Atru.chr2.2609' => 'acertr', 'Atru.chr5.3428' => 'acertr', 'Atru.chr8.1171' => 'acertr', 'AUR62004651' => 'cqu', 'AUR62008675' => 'cqu', 'AUR62010014' => 'cqu', 'AUR62013004' => 'cqu', 'AUR62014825' => 'cqu', 'AUR62015015' => 'cqu', 'AUR62015151' => 'cqu', 'AUR62017020' => 'cqu', 'AUR62019422' => 'cqu', 'AUR62023570' => 'cqu', 'AUR62025571' => 'cqu', 'AUR62029098' => 'cqu', 'AUR62033863' => 'cqu', 'AUR62034296' => 'cqu', 'AUR62040075' => 'cqu', 'BcaB02g07334' => 'bca', 'BcaB02g10575' => 'bca', 'BcaB03g12119' => 'bca', 'BcaB03g12120' => 'bca', 'BcaB03g13945' => 'bca', 'BcaB04g17123' => 'bca', 'BcaB04g17867' => 'bca', 'BcaB04g19839' => 'bca', 'BcaB07g30317' => 'bca', 'BcaB07g32432' => 'bca', 'BcaB07g33362' => 'bca', 'BcaB08g36611' => 'bca', 'BcaC01g00028' => 'bca', 'BcaC01g01356' => 'bca', 'BcaC01g02034' => 'bca', 'BcaC01g06051' => 'bca', 'BcaC03g16839' => 'bca', 'BcaC03g17176' => 'bca', 'BcaC05g26829' => 'bca', 'BcaC06g31490' => 'bca', 'BcaC06g35344' => 'bca', 'BcaC06g36570' => 'bca', 'BcaC07g37537' => 'bca', 'BcaC08g43491' => 'bca', 'BcaC08g43773' => 'bca', 'BcaNung00234' => 'bca', 'BcaNung01982' => 'bca', 'BcaNung03707' => 'bca', 'BcaNung06454' => 'bca', 'BolC2t10762H' => 'bol', 'BolC2t11191H' => 'bol', 'BolC3t14322H' => 'bol', 'BolC3t19747H' => 'bol', 'BolC3t21425H' => 'bol', 'BolC4t27800H' => 'bol', 'BolC5t31423H' => 'bol', 'BolC6t35951H' => 'bol', 'BolC6t36282H' => 'bol', 'BolC7t40678H' => 'bol', 'BolC7t40679H' => 'bol', 'BolC7t42222H' => 'bol', 'BolC7t43492H' => 'bol', 'BolC7t46785H' => 'bol', 'BolC8t47853H' => 'bol', 'BolC9t56805H' => 'bol', 'BraA02t08000Z' => 'bra', 'BraA02t08341Z' => 'bra', 'BraA03t10936Z' => 'bra', 'BraA03t15657Z' => 'bra', 'BraA04t18100Z' => 'bra', 'BraA05t20523Z' => 'bra', 'BraA06t23353Z' => 'bra', 'BraA06t27473Z' => 'bra', 'BraA06t27769Z' => 'bra', 'BraA07t28928Z' => 'bra', 'BraA08t32236Z' => 'bra', 'BraA08t32841Z' => 'bra', 'BraA08t34524Z' => 'bra', 'BraA09t38742Z' => 'bra', 'BraA09t39295Z' => 'bra', 'C02p47180' => 'bna', 'C02p50990' => 'bna', 'C03p19360' => 'bna', 'C03p74950' => 'bna', 'C03p91000' => 'bna', 'C04p63260' => 'bna', 'C05p27050' => 'bna', 'C06p08750' => 'bna', 'C06p11490' => 'bna', 'C07p02820' => 'bna', 'C07p17180' => 'bna', 'C07p29440' => 'bna', 'C07p63730' => 'bna', 'C09p39260' => 'bna', 'CAN.G1164.34' => 'can', 'CAN.G1164.39' => 'can', 'CAN.G1530.3' => 'can', 'CAN.G162.61' => 'can', 'CAN.G176.6' => 'can', 'CAN.G289.49' => 'can', 'CAN.G370.21' => 'can', 'CAN.G370.22' => 'can', 'CAN.G371.117' => 'can', 'CAN.G58.37' => 'can', 'CAN.G588.98' => 'can', 'CANSAT21G2266' => 'cansat', 'CANSAT25G2799' => 'cansat', 'CANSAT35G0862' => 'cansat', 'CANSAT35G1704' => 'cansat', 'CANSAT35G1760' => 'cansat', 'CANSAT56G3971' => 'cansat', 'CANSAT56G4116' => 'cansat', 'CANSAT80G1259' => 'cansat', 'CARHR027730' => 'chi', 'CARHR033880' => 'chi', 'CARHR043270' => 'chi', 'CARHR145330' => 'chi', 'CARHR145340' => 'chi', 'CARHR175570' => 'chi', 'CARHR181570' => 'chi', 'CARHR258470' => 'chi', 'CARHR260490' => 'chi', 'CARHR294220' => 'chi', 'Carub.0001s2668' => 'cru', 'Carub.0001s3257' => 'cru', 'Carub.0001s4220' => 'cru', 'Carub.0005s0179' => 'cru', 'Carub.0006s2807' => 'cru', 'Carub.0007s0039' => 'cru', 'Carub.0008s0169' => 'cru', 'Carub.0008s0636' => 'cru', 'Ca_00338_v3' => 'car', 'Ca_00542_v3' => 'car', 'Ca_01844_v3' => 'car', 'Ca_10611_v3' => 'car', 'Ca_13326_v3' => 'car', 'Ca_17944_v3' => 'car', 'Ca_18546_v3' => 'car', 'Ca_24219_v3' => 'car', 'Ca_29972_v3' => 'car', 'CBR_g3681' => 'cbr', 'CBR_g40021' => 'cbr', 'Cc01_g08140' => 'ccan', 'Cc02_g13410' => 'ccan', 'Cc02_g37480' => 'ccan', 'Cc05_g12030' => 'ccan', 'Cc09_g03370' => 'ccan', 'Cc09_g10300' => 'ccan', 'Cc10_g03530' => 'ccan', 'Cc10_g11380' => 'ccan', 'CDE01G0176' => 'cde', 'CDE02G0675' => 'cde', 'CDE02G0942' => 'cde', 'CDE02G1153' => 'cde', 'CDE02G4177' => 'cde', 'CDE04G2117' => 'cde', 'CDE04G2736' => 'cde', 'CDE08G1161' => 'cde', 'CDE09G1238' => 'cde', 'Cfa000467' => 'cfa', 'Cfa000947' => 'cfa', 'Cfa004969' => 'cfa', 'Cfa005284' => 'cfa', 'Cfa008993' => 'cfa', 'Cfa018187' => 'cfa', 'Cfa018454' => 'cfa', 'Cfa020585' => 'cfa', 'Ciclev10000424m.g' => 'ccl', 'Ciclev10003605m.g' => 'ccl', 'Ciclev10007828m.g' => 'ccl', 'Ciclev10014620m.g' => 'ccl', 'Ciclev10015169m.g' => 'ccl', 'Ciclev10018291m.g' => 'ccl', 'Ciclev10028256m.g' => 'ccl', 'Ciclev10033822m.g' => 'ccl', 'CiPaw.05G060300' => 'cil', 'CiPaw.05G085000' => 'cil', 'CiPaw.06G083700' => 'cil', 'CiPaw.06G120300' => 'cil', 'CiPaw.09G060500' => 'cil', 'CiPaw.09G123800' => 'cil', 'CiPaw.11G169700' => 'cil', 'CiPaw.12G118300' => 'cil', 'CiPaw.15G071000' => 'cil', 'CiPaw.15G081900' => 'cil', 'ClCG01G024610' => 'cla', 'ClCG03G006070' => 'cla', 'ClCG05G019250' => 'cla', 'ClCG09G009500' => 'cla', 'ClCG11G008200' => 'cla', 'ClCG11G018080' => 'cla', 'COL.COLO4_17373' => 'col', 'COL.COLO4_22994' => 'col', 'COL.COLO4_26389' => 'col', 'COL.COLO4_27170' => 'col', 'COL.COLO4_31074' => 'col', 'COL.COLO4_31465' => 'col', 'COL.COLO4_36438' => 'col', 'COL.COLO4_36439' => 'col', 'Cpa.g.c38781' => 'cpa', 'Cpa.g.sc128.12' => 'cpa', 'Cpa.g.sc166.7' => 'cpa', 'Cpa.g.sc166.8' => 'cpa', 'Cpa.g.sc20.111' => 'cpa', 'Cpa.g.sc27.31' => 'cpa', 'Cpa.g.sc64.36' => 'cpa', 'Cpa.g.sc64.37' => 'cpa', 'Cpa.g.sc66.49' => 'cpa', 'Cpa.g.sc80.64' => 'cpa', 'CsaV3_1G012320' => 'csa', 'CsaV3_2G008480' => 'csa', 'CsaV3_2G033450' => 'csa', 'CsaV3_3G044830' => 'csa', 'CsaV3_4G033710' => 'csa', 'CsaV3_6G051730' => 'csa', 'CsaV3_7G025350' => 'csa', 'CSS0001067' => 'camsi', 'CSS0005996' => 'camsi', 'CSS0006590' => 'camsi', 'CSS0009673' => 'camsi', 'CSS0010201' => 'camsi', 'CSS0010549' => 'camsi', 'CSS0011364' => 'camsi', 'CSS0014473' => 'camsi', 'CSS0014961' => 'camsi', 'CSS0020191' => 'camsi', 'CSS0021165' => 'camsi', 'CSS0022306' => 'camsi', 'CSS0030591' => 'camsi', 'CSS0030696' => 'camsi', 'CSS0032653' => 'camsi', 'CSS0037487' => 'camsi', 'CSS0041102' => 'camsi', 'CSS0041261' => 'camsi', 'CSS0046246' => 'camsi', 'CSS0049256' => 'camsi', 'DCAR_004075' => 'dca', 'DCAR_011538' => 'dca', 'DCAR_019553' => 'dca', 'DCAR_020952' => 'dca', 'DCAR_021739' => 'dca', 'DCAR_027407' => 'dca', 'DCAR_027913' => 'dca', 'DCAR_028066' => 'dca', 'Dinv05899' => 'din', 'Dinv07563' => 'din', 'Dinv08010' => 'din', 'Dinv14125' => 'din', 'Dinv20172' => 'din', 'Dinv30743' => 'din', 'Dinv31229' => 'din', 'Dinv34162' => 'din', 'Dinv36028' => 'din', 'Dinv39368' => 'din', 'Dinv40565' => 'din', 'Dinv41706' => 'din', 'Duzib052G0089' => 'dzi', 'Duzib116G0641' => 'dzi', 'Duzib132G0069' => 'dzi', 'Duzib132G1219' => 'dzi', 'Duzib147G0278' => 'dzi', 'Duzib160G0480' => 'dzi', 'Duzib170G0661' => 'dzi', 'Duzib177G0591' => 'dzi', 'Duzib187G1353' => 'dzi', 'Duzib192G0858' => 'dzi', 'Duzib192G0883' => 'dzi', 'Duzib213G0506' => 'dzi', 'Duzib235G0289' => 'dzi', 'Duzib251G0422' => 'dzi', 'ECA232G3898' => 'eca', 'ECA233G5950' => 'eca', 'ECA234G1699' => 'eca', 'ECA234G2421' => 'eca', 'ECA236G0426' => 'eca', 'ECA236G4331' => 'eca', 'ECA248G2573' => 'eca', 'EL10Ac1g00077' => 'bvu', 'EL10Ac1g01746' => 'bvu', 'EL10Ac2g03464' => 'bvu', 'EL10Ac4g08176' => 'bvu', 'EL10Ac7g17521' => 'bvu', 'EL10Ac8g20386' => 'bvu', 'EL10Ac9g21343' => 'bvu', 'EL10Ac9g22688' => 'bvu', 'Eucgr.B03434' => 'egr', 'Eucgr.D00618' => 'egr', 'Eucgr.E02395' => 'egr', 'Eucgr.F01129' => 'egr', 'Eucgr.F02622' => 'egr', 'Eucgr.F04207' => 'egr', 'FAN01G0570' => 'fan', 'FAN03G3351' => 'fan', 'FAN06G3702' => 'fan', 'FAN07G2149' => 'fan', 'FAN10G3758' => 'fan', 'FAN11G1170' => 'fan', 'FAN11G2050' => 'fan', 'FAN11G2724' => 'fan', 'FAN12G1700' => 'fan', 'FAN12G2028' => 'fan', 'FAN15G1160' => 'fan', 'FAN15G3063' => 'fan', 'FAN16G2540' => 'fan', 'FAN16G3077' => 'fan', 'FAN16G3624' => 'fan', 'FAN17G0221' => 'fan', 'FAN20G2492' => 'fan', 'FAN20G2905' => 'fan', 'FAN21G0548' => 'fan', 'FAN21G1300' => 'fan', 'FAN22G0077' => 'fan', 'FAN22G1315' => 'fan', 'FAN24G1280' => 'fan', 'FAN24G1445' => 'fan', 'FAN24G3527' => 'fan', 'FAN25G0464' => 'fan', 'FAN25G2885' => 'fan', 'FAN25G3270' => 'fan', 'FAN27G1101' => 'fan', 'FAN27G2846' => 'fan', 'FAN27G3524' => 'fan', 'FvH4_2g11770' => 'fve', 'FvH4_2g15630' => 'fve', 'FvH4_3g05570' => 'fve', 'FvH4_3g09110' => 'fve', 'FvH4_3g19940' => 'fve', 'FvH4_4g04821' => 'fve', 'FvH4_4g31480' => 'fve', 'FvH4_7g01740' => 'fve', 'Glyma.05G130400' => 'gma', 'Glyma.05G156400' => 'gma', 'Glyma.07G197000' => 'gma', 'Glyma.08G085151' => 'gma', 'Glyma.08G114500' => 'gma', 'Glyma.08G300400' => 'gma', 'Glyma.10G215800' => 'gma', 'Glyma.12G224400' => 'gma', 'Glyma.13G179300' => 'gma', 'Glyma.13G218151' => 'gma', 'Glyma.13G238800' => 'gma', 'Glyma.13G276900' => 'gma', 'Glyma.14G078200' => 'gma', 'Glyma.15G074500' => 'gma', 'Glyma.15G094100' => 'gma', 'Glyma.17G247200' => 'gma', 'Glyma.18G120100' => 'gma', 'Glyma.20G176000' => 'gma', 'Gohir.A01G063600' => 'ghi', 'Gohir.A01G170301' => 'ghi', 'Gohir.A02G060500' => 'ghi', 'Gohir.A05G133850' => 'ghi', 'Gohir.A05G161400' => 'ghi', 'Gohir.A06G012900' => 'ghi', 'Gohir.A06G035901' => 'ghi', 'Gohir.A06G127100' => 'ghi', 'Gohir.A06G210500' => 'ghi', 'Gohir.A08G008650' => 'ghi', 'Gohir.A09G072700' => 'ghi', 'Gohir.A09G088301' => 'ghi', 'Gohir.A10G040600' => 'ghi', 'Gohir.A12G036300' => 'ghi', 'Gohir.A12G143350' => 'ghi', 'Gohir.A12G165500' => 'ghi', 'Gohir.A13G145700' => 'ghi', 'Gohir.D01G050000' => 'ghi', 'Gohir.D01G051366' => 'ghi', 'Gohir.D01G161350' => 'ghi', 'Gohir.D02G065900' => 'ghi', 'Gohir.D05G164200' => 'ghi', 'Gohir.D05G355500' => 'ghi', 'Gohir.D06G010400' => 'ghi', 'Gohir.D06G111250' => 'ghi', 'Gohir.D06G132000' => 'ghi', 'Gohir.D06G210500' => 'ghi', 'Gohir.D07G165675' => 'ghi', 'Gohir.D08G062240' => 'ghi', 'Gohir.D08G086101' => 'ghi', 'Gohir.D08G138060' => 'ghi', 'Gohir.D09G072300' => 'ghi', 'Gohir.D10G041400' => 'ghi', 'Gohir.D11G191020' => 'ghi', 'Gohir.D11G212066' => 'ghi', 'Gohir.D12G036300' => 'ghi', 'Gohir.D12G168600' => 'ghi', 'Gohir.D13G150600' => 'ghi', 'Gorai.001G057300' => 'gra', 'Gorai.002G069900' => 'gra', 'Gorai.002G200000' => 'gra', 'Gorai.003G067600' => 'gra', 'Gorai.005G074800' => 'gra', 'Gorai.006G087300' => 'gra', 'Gorai.008G037500' => 'gra', 'Gorai.008G181400' => 'gra', 'Gorai.009G169400' => 'gra', 'Gorai.009G387900' => 'gra', 'Gorai.010G013300' => 'gra', 'Gorai.010G153800' => 'gra', 'Gorai.010G255800' => 'gra', 'Gorai.011G043700' => 'gra', 'Gorai.011G198900' => 'gra', 'Gorai.013G168400' => 'gra', 'GSVIVG01005212001' => 'vvi', 'GSVIVG01006163001' => 'vvi', 'GSVIVG01009625001' => 'vvi', 'GSVIVG01014338001' => 'vvi', 'GSVIVG01020005001' => 'vvi', 'GSVIVG01021450001' => 'vvi', 'GSVIVG01023975001' => 'vvi', 'GSVIVG01034490001' => 'vvi', 'HanXRQChr04g0112071' => 'han', 'HanXRQChr05g0131151' => 'han', 'HanXRQChr09g0262371' => 'han', 'HanXRQChr09g0268401' => 'han', 'HanXRQChr10g0279241' => 'han', 'HanXRQChr10g0297961' => 'han', 'HanXRQChr11g0326231' => 'han', 'HanXRQChr11g0328471' => 'han', 'HanXRQChr16g0507941' => 'han', 'HanXRQChr17g0560211' => 'han', 'Haze_02108' => 'cav', 'Haze_02428' => 'cav', 'Haze_05593' => 'cav', 'Haze_06448' => 'cav', 'Haze_09427' => 'cav', 'Haze_12022' => 'cav', 'Haze_17612' => 'cav', 'Haze_17928' => 'cav', 'Hma1.2p1_0032F.1_g019250' => 'hma', 'Hma1.2p1_0163F.1_g072690' => 'hma', 'Hma1.2p1_0265F.1_g106710' => 'hma', 'Hma1.2p1_0286F.1_g113970' => 'hma', 'Hma1.2p1_0363F.1_g136640' => 'hma', 'Hma1.2p1_0584F.1_g183470' => 'hma', 'Hma1.2p1_0885F.1_g232570' => 'hma', 'HPP92_006022' => 'vpl', 'HPP92_007320' => 'vpl', 'HPP92_011521' => 'vpl', 'HPP92_019387' => 'vpl', 'HPP92_024038' => 'vpl', 'Hund05891' => 'sun', 'Hund06450' => 'sun', 'Hund12053' => 'sun', 'Hund16800' => 'sun', 'Hund21222' => 'sun', 'Hund22896' => 'sun', 'Hund23746' => 'sun', 'Hund27083' => 'sun', 'Lalb_Chr02g0141831' => 'lal', 'Lalb_Chr02g0141841' => 'lal', 'Lalb_Chr05g0220411' => 'lal', 'Lalb_Chr06g0162081' => 'lal', 'Lalb_Chr09g0327651' => 'lal', 'Lalb_Chr13g0295051' => 'lal', 'Lalb_Chr15g0086801' => 'lal', 'Lalb_Chr16g0383781' => 'lal', 'Lalb_Chr16g0383791' => 'lal', 'Lalb_Chr18g0055441' => 'lal', 'Lalb_Chr18g0059611' => 'lal', 'Lalb_Chr20g0109661' => 'lal', 'Lalb_Chr20g0109831' => 'lal', 'Lalb_Chr20g0121871' => 'lal', 'Lalb_Chr22g0355361' => 'lal', 'Lalb_Chr25g0286371' => 'lal', 'Lj1A1187G43' => 'lonja', 'Lj1A1205T50' => 'lonja', 'Lj1A800G33' => 'lonja', 'Lj1C1187T7' => 'lonja', 'Lj1C843T11' => 'lonja', 'Lj1g0010940' => 'lja', 'Lj2A288T69' => 'lonja', 'Lj3g0024276' => 'lja', 'Lj4A47T76' => 'lonja', 'Lj4g0005805' => 'lja', 'Lj4g0006097' => 'lja', 'Lj4g0008528' => 'lja', 'Lj4g0024907' => 'lja', 'Lj5g0012472' => 'lja', 'Lj5g0018648' => 'lja', 'Lj6C789G1' => 'lonja', 'Lj6g0004000' => 'lja', 'Lj7A292G67' => 'lonja', 'Lj7A292T64' => 'lonja', 'Lj9A400T58' => 'lonja', 'Lsat_1_v5_gn_1_126181' => 'lsa', 'Lsat_1_v5_gn_4_123041' => 'lsa', 'Lsat_1_v5_gn_4_133620' => 'lsa', 'Lsat_1_v5_gn_4_53221' => 'lsa', 'Lsat_1_v5_gn_4_71961' => 'lsa', 'Lsat_1_v5_gn_7_105241' => 'lsa', 'Lsat_1_v5_gn_7_21361' => 'lsa', 'Lsat_1_v5_gn_7_28860' => 'lsa', 'Lsat_1_v5_gn_7_31260' => 'lsa', 'Lsat_1_v5_gn_8_52801' => 'lsa', 'Manes.02G191400' => 'mes', 'Manes.03G110100' => 'mes', 'Manes.04G071100' => 'mes', 'Manes.05G100500' => 'mes', 'Manes.05G164700' => 'mes', 'Manes.15G087000' => 'mes', 'Manes.15G121500' => 'mes', 'Manes.16G028300' => 'mes', 'Manes.17G046100' => 'mes', 'Manes.17G069800' => 'mes', 'Manes.18G100500' => 'mes', 'Mapoly0002s0109' => 'mpo', 'Mapoly0024s0007' => 'mpo', 'Mapoly0089s0032' => 'mpo', 'MBI04_g42241_MAGBIO' => 'mbi', 'MBI05_g11988_MAGBIO' => 'mbi', 'MBI05_g35452_MAGBIO' => 'mbi', 'MBI07_g30179_MAGBIO' => 'mbi', 'MBI07_g35859_MAGBIO' => 'mbi', 'MBI07_g35860_MAGBIO' => 'mbi', 'MBI07_g37166_MAGBIO' => 'mbi', 'MBI08_g18172_MAGBIO' => 'mbi', 'MBI09_g08441_MAGBIO' => 'mbi', 'MBI13_g01676_MAGBIO' => 'mbi', 'MBI14_g42955_MAGBIO' => 'mbi', 'MBI16_g13161_MAGBIO' => 'mbi', 'MBI17_g27204_MAGBIO' => 'mbi', 'MBI19_g21595_MAGBIO' => 'mbi', 'MD00G1148400' => 'mdo', 'MD02G1301200' => 'mdo', 'MD03G1227800' => 'mdo', 'MD05G1041100' => 'mdo', 'MD05G1124800' => 'mdo', 'MD05G1284000' => 'mdo', 'MD05G1338800' => 'mdo', 'MD05G1338900' => 'mdo', 'MD07G1022800' => 'mdo', 'MD10G1047500' => 'mdo', 'MD10G1127500' => 'mdo', 'MD10G1262300' => 'mdo', 'MD10G1293800' => 'mdo', 'MD16G1074300' => 'mdo', 'Medtr1g021670' => 'mtr', 'Medtr1g096320' => 'mtr', 'Medtr2g013690' => 'mtr', 'Medtr2g019450' => 'mtr', 'Medtr2g085170' => 'mtr', 'Medtr4g088785' => 'mtr', 'Medtr8g055930' => 'mtr', 'Medtr8g085850' => 'mtr', 'MELO3C002605.2' => 'cme', 'MELO3C003891.2' => 'cme', 'MELO3C004012.2' => 'cme', 'MELO3C007134.2' => 'cme', 'MELO3C008118.2' => 'cme', 'MELO3C016700.2' => 'cme', 'MELO3C024127.2' => 'cme', 'MELO3C033361.2' => 'cme', 'MELO3C033362.2' => 'cme', 'Migut.C00430' => 'egut', 'Migut.C01246' => 'egut', 'Migut.E00101' => 'egut', 'Migut.H01486' => 'egut', 'Migut.H01939' => 'egut', 'Migut.K00360' => 'egut', 'Migut.M00910' => 'egut', 'Migut.M01139' => 'egut', 'Migut.N02677' => 'egut', 'MSTRG.13252' => 'ama', 'MSTRG.14701' => 'ama', 'MSTRG.1521' => 'ama', 'MSTRG.15884' => 'ama', 'MSTRG.16242' => 'ama', 'MSTRG.22285' => 'ama', 'MSTRG.22444' => 'ama', 'MSTRG.2349' => 'ama', 'MSTRG.26308' => 'ama', 'MSTRG.28296' => 'ama', 'MSTRG.9895' => 'ama', 'Nitab4.5_0000110g0060' => 'nta', 'Nitab4.5_0000420g0130' => 'nta', 'Nitab4.5_0000422g0030' => 'nta', 'Nitab4.5_0000560g0180' => 'nta', 'Nitab4.5_0000703g0100' => 'nta', 'Nitab4.5_0000786g0200' => 'nta', 'Nitab4.5_0001336g0020' => 'nta', 'Nitab4.5_0001796g0030' => 'nta', 'Nitab4.5_0003348g0060' => 'nta', 'Nitab4.5_0003698g0040' => 'nta', 'Nitab4.5_0003942g0090' => 'nta', 'Nitab4.5_0004775g0070' => 'nta', 'Nitab4.5_0004864g0030' => 'nta', 'Nitab4.5_0005615g0020' => 'nta', 'Nitab4.5_0009288g0030' => 'nta', 'Nitab4.5_0009341g0010' => 'nta', 'Nitab4.5_0009535g0010' => 'nta', 'Nn1g03995' => 'nnu', 'Nn1g04100' => 'nnu', 'Nn1g06530' => 'nnu', 'Nn3g16404' => 'nnu', 'Nn3g17212' => 'nnu', 'Nn3g20776' => 'nnu', 'Nn3g21923' => 'nnu', 'Nn5g27737' => 'nnu', 'Nn5g29461' => 'nnu', 'Nn7g38355' => 'nnu', 'Nn8g39873' => 'nnu', 'Oeu000548.2' => 'oeu', 'Oeu004672.1' => 'oeu', 'Oeu015605.2' => 'oeu', 'Oeu016092.1' => 'oeu', 'Oeu017879.3' => 'oeu', 'Oeu024910.1' => 'oeu', 'Oeu028965.1' => 'oeu', 'Oeu031269.1' => 'oeu', 'Oeu031270.1' => 'oeu', 'Oeu032535.1' => 'oeu', 'Oeu034151.1' => 'oeu', 'Oeu034152.1' => 'oeu', 'Oeu034588.2' => 'oeu', 'Oeu050846.1' => 'oeu', 'Oeu050849.2' => 'oeu', 'Oeu051063.2' => 'oeu', 'Oeu052368.1' => 'oeu', 'Oeu052370.1' => 'oeu', 'Os01g0210400' => 'osa', 'Os01g0304300' => 'osa', 'Os01g0749100' => 'osa', 'Os02g0745800' => 'osa', 'Os03g0769050' => 'osa', 'Os05g0531500' => 'osa', 'Os06g0724300' => 'osa', 'Os11g0198100' => 'osa', 'Peaxi162Scf00069g01425' => 'pax', 'Peaxi162Scf00280g00811' => 'pax', 'Peaxi162Scf00310g00615' => 'pax', 'Peaxi162Scf00362g00542' => 'pax', 'Peaxi162Scf00461g00310' => 'pax', 'Peaxi162Scf00530g00118' => 'pax', 'Peaxi162Scf00541g00057' => 'pax', 'Peaxi162Scf00661g00017' => 'pax', 'Peaxi162Scf00926g00027' => 'pax', 'Peaxi162Scf01064g00263' => 'pax', 'Peaxi162Scf01211g00135' => 'pax', 'PGR004G2336' => 'pgr', 'PGR042G0327' => 'pgr', 'PGR042G1957' => 'pgr', 'PGR042G2003' => 'pgr', 'PGR042G3929' => 'pgr', 'PGR083G1137' => 'pgr', 'PGR083G1364' => 'pgr', 'PGSC0003DMG400003381' => 'stu', 'PGSC0003DMG400003417' => 'stu', 'PGSC0003DMG400008981' => 'stu', 'PGSC0003DMG400012417' => 'stu', 'PGSC0003DMG400012823' => 'stu', 'PGSC0003DMG400016885' => 'stu', 'PGSC0003DMG400022812' => 'stu', 'PGSC0003DMG400029726' => 'stu', 'PGSC0003DMG401009243' => 'stu', 'PGSC0003DMG401031505' => 'stu', 'PGSC0003DMG402031505' => 'stu', 'Phvul.001G017600' => 'pvu', 'Phvul.002G193500' => 'pvu', 'Phvul.002G228900' => 'pvu', 'Phvul.002G236800' => 'pvu', 'Phvul.003G049500' => 'pvu', 'Phvul.005G072000' => 'pvu', 'Phvul.006G164800' => 'pvu', 'Phvul.006G185100' => 'pvu', 'Phvul.007G090000' => 'pvu', 'Potri.001G399800' => 'ptr', 'Potri.002G149900' => 'ptr', 'Potri.004G044100' => 'ptr', 'Potri.004G177600' => 'ptr', 'Potri.009G138000' => 'ptr', 'Potri.010G094000' => 'ptr', 'Potri.011G053000' => 'ptr', 'Potri.011G119300' => 'ptr', 'Potri.013G113700' => 'ptr', 'Potri.018G107800' => 'ptr', 'Potri.019G084100' => 'ptr', 'Pp3c14_23720' => 'ppa', 'Pp3c16_6340' => 'ppa', 'Pp3c23_13420' => 'ppa', 'Pp3c24_2740' => 'ppa', 'Pp3c25_860' => 'ppa', 'Pp3c8_21750' => 'ppa', 'Prupe.1G273000' => 'ppe', 'Prupe.1G273700' => 'ppe', 'Prupe.1G274100' => 'ppe', 'Prupe.2G023300' => 'ppe', 'Prupe.4G048000' => 'ppe', 'Prupe.4G080400' => 'ppe', 'Prupe.4G181200' => 'ppe', 'Prupe.8G056900' => 'ppe', 'Prupe.8G168700' => 'ppe', 'Psat1g189080' => 'psa', 'Psat1g204760' => 'psa', 'Psat4g175560' => 'psa', 'Psat4g177720' => 'psa', 'Psat5g244240' => 'psa', 'Psat6g010720' => 'psa', 'Psat6g187200' => 'psa', 'Psat7g072040' => 'psa', 'PSO017G3501' => 'pso', 'PSO063G2148' => 'pso', 'PSO063G5608' => 'pso', 'PSO210G6392' => 'pso', 'PSO541G2319' => 'pso', 'PSO541G2836' => 'pso', 'PSO541G4012' => 'pso', 'PSO541G6253' => 'pso', 'PSO675G0580' => 'pso', 'PSO675G0856' => 'pso', 'PSO675G5635' => 'pso', 'PSO675G9157' => 'pso', 'PSO832G1660' => 'pso', 'PSO832G1969' => 'pso', 'QL02p007186' => 'qlo', 'QL02p033904' => 'qlo', 'QL03p064391' => 'qlo', 'QL05p040593' => 'qlo', 'QL05p058242' => 'qlo', 'QL08p021825' => 'qlo', 'QL11p004981' => 'qlo', 'RcHm_v2.0_Chr1g0318301' => 'rch', 'RcHm_v2.0_Chr4g0418501' => 'rch', 'RcHm_v2.0_Chr4g0439971' => 'rch', 'RcHm_v2.0_Chr5g0008541' => 'rch', 'RcHm_v2.0_Chr5g0014101' => 'rch', 'RcHm_v2.0_Chr5g0014131' => 'rch', 'RcHm_v2.0_Chr5g0033621' => 'rch', 'RcHm_v2.0_Chr6g0272041' => 'rch', 'RcHm_v2.0_Chr6g0278831' => 'rch', 'Rhsim02G0130400' => 'rsi', 'Rhsim02G0171100' => 'rsi', 'Rhsim05G0053000' => 'rsi', 'Rhsim05G0053100' => 'rsi', 'Rhsim06G0096500' => 'rsi', 'Rhsim06G0096600' => 'rsi', 'Rhsim06G0199100' => 'rsi', 'Rhsim12G0062300' => 'rsi', 'Rhsim12G0062800' => 'rsi', 'Sabra02G0118600' => 'sbr', 'Sabra04G0027300' => 'sbr', 'Sabra04G0119500' => 'sbr', 'Sabra08G0112500' => 'sbr', 'Sabra11G0036800' => 'sbr', 'Sabra11G0103800' => 'sbr', 'Sabra13G0096300' => 'sbr', 'Sabra16G0262300' => 'sbr', 'Sabra18G0091700' => 'sbr', 'Sabra19G0095400' => 'sbr', 'SalBow6G3080' => 'sbo', 'SalBow7G1157' => 'sbo', 'SalBow7G2123' => 'sbo', 'SalBow7G2285' => 'sbo', 'SalBow7G3537' => 'sbo', 'SalBow8G2947' => 'sbo', 'SalBow8G4463' => 'sbo', 'SalBow8G5466' => 'sbo', 'Sc01g0001750' => 'sci', 'Sc02g0006640' => 'sci', 'Sc02g0006670' => 'sci', 'Sc04g0008220' => 'sci', 'Sc05g0006190' => 'sci', 'Sc08g0002760' => 'sci', 'Sc17g0006170' => 'sci', 'Sc22g0002050' => 'sci', 'Sc23g0001190' => 'sci', 'Sc24g0000980' => 'sci', 'Sed0006245' => 'sed', 'Sed0007543' => 'sed', 'Sed0009411' => 'sed', 'Sed0010765' => 'sed', 'Sed0012944' => 'sed', 'Sed0014682' => 'sed', 'Sed0016174' => 'sed', 'Sed0016796' => 'sed', 'Sed0020317' => 'sed', 'Sed0021467' => 'sed', 'SEGI_01316' => 'sgi', 'SEGI_03374' => 'sgi', 'SEGI_16265' => 'sgi', 'SEGI_18569' => 'sgi', 'SEGI_20351' => 'sgi', 'SEGI_26395' => 'sgi', 'SEGI_29469' => 'sgi', 'SEGI_34771' => 'sgi', 'SEGI_36769' => 'sgi', 'SEGI_37139' => 'sgi', 'SGA_v2.0_scaffold100G29687' => 'sas', 'SGA_v2.0_scaffold118G32472' => 'sas', 'SGA_v2.0_scaffold14G07051' => 'sas', 'SGA_v2.0_scaffold183G39845' => 'sas', 'SGA_v2.0_scaffold1G00174' => 'sas', 'SGA_v2.0_scaffold22G09714' => 'sas', 'SGA_v2.0_scaffold333G48992' => 'sas', 'SGA_v2.0_scaffold46G17491' => 'sas', 'SGA_v2.0_scaffold49G18294' => 'sas', 'SGA_v2.0_scaffold63G21658' => 'sas', 'SHI01741' => 'shi', 'SHI05771' => 'shi', 'SHI18077' => 'shi', 'SHI20525' => 'shi', 'SHI20527' => 'shi', 'SHI20528' => 'shi', 'SMO172G0185' => 'smo', 'SMO198G0020' => 'smo', 'SMO351G0006' => 'smo', 'SMO356G0118' => 'smo', 'SMO358G0296' => 'smo', 'SMO367G0079' => 'smo', 'SMO367G1277' => 'smo', 'Solyc01g014220.3' => 'sly', 'Solyc01g111770.2' => 'sly', 'Solyc02g078180.3' => 'sly', 'Solyc03g006430.3' => 'sly', 'Solyc03g006456.1' => 'sly', 'Solyc03g079860.2' => 'sly', 'Solyc04g079770.3' => 'sly', 'Solyc05g007430.4' => 'sly', 'Solyc07g063150.3' => 'sly', 'Solyc08g016620.3' => 'sly', 'Solyc09g057590.3' => 'sly', 'Solyc09g057600.1' => 'sly', 'Solyc10g009050.3' => 'sly', 'Solyc11g017420.2' => 'sly', 'Sopen01g053810' => 'spe', 'Sopen02g023040' => 'spe', 'Sopen03g002440' => 'spe', 'Sopen04g033350' => 'spe', 'Sopen05g003310' => 'spe', 'Sopen07g004050' => 'spe', 'Sopen07g031340' => 'spe', 'Sopen08g006990' => 'spe', 'Sopen10g004830' => 'spe', 'Sopen11g009370' => 'spe', 'Sp1g24450' => 'spa', 'Sp1g29670' => 'spa', 'Sp1g39600' => 'spa', 'Sp2g11080' => 'spa', 'Sp2g13970' => 'spa', 'Sp4g16130' => 'spa', 'Sp6g13080' => 'spa', 'Sp7g37270' => 'spa', 'TAR371G0065' => 'tar', 'TAR376G0340' => 'tar', 'TAR376G0435' => 'tar', 'TAR381G0002' => 'tar', 'TAR381G1236' => 'tar', 'TAR624G0055' => 'tar', 'TAR624G0324' => 'tar', 'TAR624G0696' => 'tar', 'TAR624G0906' => 'tar', 'TAR625G0107' => 'tar', 'TAR626G0015' => 'tar', 'TAR626G1356' => 'tar', 'TAR627G0888' => 'tar', 'TAR628G0399' => 'tar', 'TAR628G1327' => 'tar', 'TAR629G2831' => 'tar', 'TAR629G2874' => 'tar', 'TAR633G1432' => 'tar', 'TAR633G2771' => 'tar', 'THA.LOC104803394' => 'tha', 'THA.LOC104805153' => 'tha', 'THA.LOC104806784' => 'tha', 'THA.LOC104810473' => 'tha', 'THA.LOC104813100' => 'tha', 'THA.LOC104814215' => 'tha', 'THA.LOC104815554' => 'tha', 'THA.LOC104820544' => 'tha', 'THA.LOC104824754' => 'tha', 'THA.LOC104827717' => 'tha', 'Thecc.02G031400' => 'tca', 'Thecc.02G055900' => 'tca', 'Thecc.02G350800' => 'tca', 'Thecc.06G150900' => 'tca', 'Thecc.06G186600' => 'tca', 'Thecc.07G089600' => 'tca', 'Thecc.08G020400' => 'tca', 'Thecc.08G182100' => 'tca', 'Thhalv10000873m.g' => 'esa', 'Thhalv10004185m.g' => 'esa', 'Thhalv10006981m.g' => 'esa', 'Thhalv10007204m.g' => 'esa', 'Thhalv10011374m.g' => 'esa', 'Thhalv10013482m.g' => 'esa', 'Thhalv10017801m.g' => 'esa', 'Thhalv10024983m.g' => 'esa', 'TPR.G12072' => 'tpr', 'TPR.G15769' => 'tpr', 'TPR.G16504' => 'tpr', 'TPR.G16506' => 'tpr', 'TPR.G24345' => 'tpr', 'TPR.G26666' => 'tpr', 'TPR.G27320' => 'tpr', 'TPR.G31819' => 'tpr', 'TPR.G38879' => 'tpr', 'TPR.G39015' => 'tpr', 'TPR.G8819' => 'tpr', 'TWI09G0924' => 'twi', 'TWI12G0811' => 'twi', 'TWI12G1294' => 'twi', 'TWI31G0150' => 'twi', 'TWI36G1262' => 'twi', 'TWI38G1287' => 'twi', 'TWI38G1633' => 'twi', 'TWI38G1982' => 'twi', 'TWI39G0116' => 'twi', 'TWI60G1011' => 'twi', 'TWI63G0171' => 'twi', 'TWI73G0839' => 'twi', 'TWI79G1511' => 'twi', 'unitig_0.g915' => 'ugi', 'unitig_0.g916' => 'ugi', 'unitig_21.g20219' => 'ugi', 'unitig_21.g20416' => 'ugi', 'unitig_578.g16132' => 'ugi', 'unitig_578.g16718' => 'ugi', 'unitig_62.g23481' => 'ugi', 'unitig_744.g24535' => 'ugi', 'unitig_749.g13525' => 'ugi', 'vmacro01248' => 'vma', 'vmacro02290' => 'vma', 'vmacro10946' => 'vma', 'vmacro11865' => 'vma', 'vmacro12493' => 'vma', 'vmacro17322' => 'vma', 'vmacro21599' => 'vma', 'vmacro23041' => 'vma', 'VMungo0251G0004' => 'vmu', 'VMungo0251G2639' => 'vmu', 'VMungo0251G2967' => 'vmu', 'VMungo0540G0864' => 'vmu', 'VMungo0540G1569' => 'vmu', 'VMungo0647G0317' => 'vmu', 'VMungo0720G1373' => 'vmu', 'VMungo0720G1508' => 'vmu', 'VMungo1080G0485' => 'vmu', 'VMungo1215G3177' => 'vmu', 'Zm00001eb112600' => 'zma', 'Zm00001eb120220' => 'zma', 'Zm00001eb153240' => 'zma', 'Zm00001eb168880' => 'zma', 'Zm00001eb213920' => 'zma', 'Zm00001eb228280' => 'zma', 'Zm00001eb254580' => 'zma', 'Zm00001eb272180' => 'zma', 'Zm00001eb293190' => 'zma', 'Zm00001eb322930' => 'zma', 'Zm00001eb353360' => 'zma', 'Zm00001eb353390' => 'zma', 'Zm00001eb353430' => 'zma', 'Zm00001eb353440' => 'zma', 'Zm00001eb353780' => 'zma' ) $gf_id = 'HOM05D000499' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000499' ) $data_identifier = 'HOM05D000499' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 29, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 12, 'amhyb' => (int) 8, 'aly' => (int) 12, 'aox' => (int) 9, 'arhy' => (int) 26, 'ath' => (int) 8, 'atr' => (int) 7, 'acertr' => (int) 10, 'cqu' => (int) 15, 'bca' => (int) 29, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 11, 'cansat' => (int) 8, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 9, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 8, 'cpa' => (int) 10, 'csa' => (int) 7, 'camsi' => (int) 20, 'dca' => (int) 8, 'din' => (int) 12, 'dzi' => (int) 14, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 6, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 38, 'gra' => (int) 16, 'vvi' => (int) 8, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 5, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 11, 'lja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 11, 'mpo' => (int) 3, 'mbi' => (int) 14, 'mdo' => (int) 14, 'mtr' => (int) 8, 'cme' => (int) 9, 'egut' => (int) 9, 'ama' => (int) 11, 'nta' => (int) 17, 'nnu' => (int) 11, 'oeu' => (int) 18, 'osa' => (int) 8, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 6, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 9, 'rsi' => (int) 9, 'sbr' => (int) 10, 'sbo' => (int) 8, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 10, 'sas' => (int) 10, 'shi' => (int) 6, 'smo' => (int) 7, 'sly' => (int) 14, 'spe' => (int) 10, 'spa' => (int) 8, 'tar' => (int) 19, 'tha' => (int) 10, 'tca' => (int) 8, 'esa' => (int) 8, 'tpr' => (int) 11, 'twi' => (int) 13, 'ugi' => (int) 9, 'vma' => (int) 8, 'vmu' => (int) 10, 'zma' => (int) 15 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb353780' $species_info = array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ) $local_species = 'din' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000499', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1066', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p29780' => 'bna', 'A02p33180' => 'bna', 'A03p16470' => 'bna', 'A03p66010' => 'bna', 'A04p25970' => 'bna', 'A06p01270' => 'bna', 'A06p46080' => 'bna', 'A07p11400' => 'bna', 'A08p01840' => 'bna', 'A08p08230' => 'bna', 'A08p25740' => 'bna', 'A09p32070' => 'bna', 'A09p37830' => 'bna', 'A09p42840' => 'bna', 'A09p42850' => 'bna', 'Aa31LG10G2060' => 'aar', 'Aa31LG2G7410' => 'aar', 'Aa31LG6G10200' => 'aar', 'Aa31LG6G16680' => 'aar', 'Aa31LG6G8470' => 'aar', 'Aa31LG9G12730' => 'aar', 'Aa31LG9G13680' => 'aar', 'Aa31LG9G14920' => 'aar', 'Aa31LG9G6650' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4977' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5467' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3254' => 'aag', 'Actinidia02578' => 'ach', 'Actinidia07693' => 'ach', 'Actinidia08413' => 'ach', 'Actinidia08414' => 'ach', 'Actinidia15289' => 'ach', 'Actinidia19871' => 'ach', 'Actinidia21475' => 'ach', 'Actinidia22576' => 'ach', 'Actinidia28327' => 'ach', 'Actinidia32491' => 'ach', 'Actinidia39463' => 'ach', 'Actinidia39571' => 'ach', 'Ah.01g013750' => 'amhyb', 'Ah.01g023210' => 'amhyb', 'Ah.04g164850' => 'amhyb', 'Ah.05g178060' => 'amhyb', 'Ah.07g204270' => 'amhyb', 'Ah.07g208480' => 'amhyb', 'Ah.09g237410' => 'amhyb', 'Ah.14g089460' => 'amhyb', 'AL1G41790' => 'aly', 'AL1G49050' => 'aly', 'AL1G53810' => 'aly', 'AL1G61400' => 'aly', 'AL4G18580' => 'aly', 'AL5G12510' => 'aly', 'AL5G12540' => 'aly', 'AL6G43230' => 'aly', 'AL7G10370' => 'aly', 'AL7G19250' => 'aly', 'AL8G12240' => 'aly', 'AL8G18540' => 'aly', 'Aqoxy1G02409' => 'aox', 'Aqoxy2G03993' => 'aox', 'Aqoxy3G03357' => 'aox', 'Aqoxy4G00785' => 'aox', 'Aqoxy5G02598' => 'aox', 'Aqoxy6G00132' => 'aox', 'Aqoxy7G01776' => 'aox', 'Aqoxy7G02316' => 'aox', 'Aqoxy7G03973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.12AFKW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B8730' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27IQR1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3F75VG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3RE0GA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41TCQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.527VTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FIR39' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5W8UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DA38EV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ63HS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H1I32C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HC27T5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4M8AP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7N3CZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9UVDZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LS1NQA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT1D4B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SKC4TM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCFV76' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF9Q1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQWD9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1ZM88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WE07RT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YCK7VH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJE6Q6' => 'arhy', 'AT1G28240' => 'ath', 'AT1G34550' => 'ath', 'AT1G53040' => 'ath', 'AT2G02910' => 'ath', 'AT4G09630' => 'ath', 'AT4G38500' => 'ath', 'AT5G42660' => 'ath', 'AT5G46220' => 'ath', 'ATR0152G026' => 'atr', 'ATR0564G343' => 'atr', 'ATR0706G151' => 'atr', 'ATR0733G207' => 'atr', 'ATR0751G234' => 'atr', 'ATR0807G048' => 'atr', 'ATR1091G084' => 'atr', 'Atru.chr10.1229' => 'acertr', 'Atru.chr10.1230' => 'acertr', 'Atru.chr10.1874' => 'acertr', 'Atru.chr11.1808' => 'acertr', 'Atru.chr13.1795' => 'acertr', 'Atru.chr13.570' => 'acertr', 'Atru.chr2.2608' => 'acertr', 'Atru.chr2.2609' => 'acertr', 'Atru.chr5.3428' => 'acertr', 'Atru.chr8.1171' => 'acertr', 'AUR62004651' => 'cqu', 'AUR62008675' => 'cqu', 'AUR62010014' => 'cqu', 'AUR62013004' => 'cqu', 'AUR62014825' => 'cqu', 'AUR62015015' => 'cqu', 'AUR62015151' => 'cqu', 'AUR62017020' => 'cqu', 'AUR62019422' => 'cqu', 'AUR62023570' => 'cqu', 'AUR62025571' => 'cqu', 'AUR62029098' => 'cqu', 'AUR62033863' => 'cqu', 'AUR62034296' => 'cqu', 'AUR62040075' => 'cqu', 'BcaB02g07334' => 'bca', 'BcaB02g10575' => 'bca', 'BcaB03g12119' => 'bca', 'BcaB03g12120' => 'bca', 'BcaB03g13945' => 'bca', 'BcaB04g17123' => 'bca', 'BcaB04g17867' => 'bca', 'BcaB04g19839' => 'bca', 'BcaB07g30317' => 'bca', 'BcaB07g32432' => 'bca', 'BcaB07g33362' => 'bca', 'BcaB08g36611' => 'bca', 'BcaC01g00028' => 'bca', 'BcaC01g01356' => 'bca', 'BcaC01g02034' => 'bca', 'BcaC01g06051' => 'bca', 'BcaC03g16839' => 'bca', 'BcaC03g17176' => 'bca', 'BcaC05g26829' => 'bca', 'BcaC06g31490' => 'bca', 'BcaC06g35344' => 'bca', 'BcaC06g36570' => 'bca', 'BcaC07g37537' => 'bca', 'BcaC08g43491' => 'bca', 'BcaC08g43773' => 'bca', 'BcaNung00234' => 'bca', 'BcaNung01982' => 'bca', 'BcaNung03707' => 'bca', 'BcaNung06454' => 'bca', 'BolC2t10762H' => 'bol', 'BolC2t11191H' => 'bol', 'BolC3t14322H' => 'bol', 'BolC3t19747H' => 'bol', 'BolC3t21425H' => 'bol', 'BolC4t27800H' => 'bol', 'BolC5t31423H' => 'bol', 'BolC6t35951H' => 'bol', 'BolC6t36282H' => 'bol', 'BolC7t40678H' => 'bol', 'BolC7t40679H' => 'bol', 'BolC7t42222H' => 'bol', 'BolC7t43492H' => 'bol', 'BolC7t46785H' => 'bol', 'BolC8t47853H' => 'bol', 'BolC9t56805H' => 'bol', 'BraA02t08000Z' => 'bra', 'BraA02t08341Z' => 'bra', 'BraA03t10936Z' => 'bra', 'BraA03t15657Z' => 'bra', 'BraA04t18100Z' => 'bra', 'BraA05t20523Z' => 'bra', 'BraA06t23353Z' => 'bra', 'BraA06t27473Z' => 'bra', 'BraA06t27769Z' => 'bra', 'BraA07t28928Z' => 'bra', 'BraA08t32236Z' => 'bra', 'BraA08t32841Z' => 'bra', 'BraA08t34524Z' => 'bra', 'BraA09t38742Z' => 'bra', 'BraA09t39295Z' => 'bra', 'C02p47180' => 'bna', 'C02p50990' => 'bna', 'C03p19360' => 'bna', 'C03p74950' => 'bna', 'C03p91000' => 'bna', 'C04p63260' => 'bna', 'C05p27050' => 'bna', 'C06p08750' => 'bna', 'C06p11490' => 'bna', 'C07p02820' => 'bna', 'C07p17180' => 'bna', 'C07p29440' => 'bna', 'C07p63730' => 'bna', 'C09p39260' => 'bna', 'CAN.G1164.34' => 'can', 'CAN.G1164.39' => 'can', 'CAN.G1530.3' => 'can', 'CAN.G162.61' => 'can', 'CAN.G176.6' => 'can', 'CAN.G289.49' => 'can', 'CAN.G370.21' => 'can', 'CAN.G370.22' => 'can', 'CAN.G371.117' => 'can', 'CAN.G58.37' => 'can', 'CAN.G588.98' => 'can', 'CANSAT21G2266' => 'cansat', 'CANSAT25G2799' => 'cansat', 'CANSAT35G0862' => 'cansat', 'CANSAT35G1704' => 'cansat', 'CANSAT35G1760' => 'cansat', 'CANSAT56G3971' => 'cansat', 'CANSAT56G4116' => 'cansat', 'CANSAT80G1259' => 'cansat', 'CARHR027730' => 'chi', 'CARHR033880' => 'chi', 'CARHR043270' => 'chi', 'CARHR145330' => 'chi', 'CARHR145340' => 'chi', 'CARHR175570' => 'chi', 'CARHR181570' => 'chi', 'CARHR258470' => 'chi', 'CARHR260490' => 'chi', 'CARHR294220' => 'chi', 'Carub.0001s2668' => 'cru', 'Carub.0001s3257' => 'cru', 'Carub.0001s4220' => 'cru', 'Carub.0005s0179' => 'cru', 'Carub.0006s2807' => 'cru', 'Carub.0007s0039' => 'cru', 'Carub.0008s0169' => 'cru', 'Carub.0008s0636' => 'cru', 'Ca_00338_v3' => 'car', 'Ca_00542_v3' => 'car', 'Ca_01844_v3' => 'car', 'Ca_10611_v3' => 'car', 'Ca_13326_v3' => 'car', 'Ca_17944_v3' => 'car', 'Ca_18546_v3' => 'car', 'Ca_24219_v3' => 'car', 'Ca_29972_v3' => 'car', 'CBR_g3681' => 'cbr', 'CBR_g40021' => 'cbr', 'Cc01_g08140' => 'ccan', 'Cc02_g13410' => 'ccan', 'Cc02_g37480' => 'ccan', 'Cc05_g12030' => 'ccan', 'Cc09_g03370' => 'ccan', 'Cc09_g10300' => 'ccan', 'Cc10_g03530' => 'ccan', 'Cc10_g11380' => 'ccan', 'CDE01G0176' => 'cde', 'CDE02G0675' => 'cde', 'CDE02G0942' => 'cde', 'CDE02G1153' => 'cde', 'CDE02G4177' => 'cde', 'CDE04G2117' => 'cde', 'CDE04G2736' => 'cde', 'CDE08G1161' => 'cde', 'CDE09G1238' => 'cde', 'Cfa000467' => 'cfa', 'Cfa000947' => 'cfa', 'Cfa004969' => 'cfa', 'Cfa005284' => 'cfa', 'Cfa008993' => 'cfa', 'Cfa018187' => 'cfa', 'Cfa018454' => 'cfa', 'Cfa020585' => 'cfa', 'Ciclev10000424m.g' => 'ccl', 'Ciclev10003605m.g' => 'ccl', 'Ciclev10007828m.g' => 'ccl', 'Ciclev10014620m.g' => 'ccl', 'Ciclev10015169m.g' => 'ccl', 'Ciclev10018291m.g' => 'ccl', 'Ciclev10028256m.g' => 'ccl', 'Ciclev10033822m.g' => 'ccl', 'CiPaw.05G060300' => 'cil', 'CiPaw.05G085000' => 'cil', 'CiPaw.06G083700' => 'cil', 'CiPaw.06G120300' => 'cil', 'CiPaw.09G060500' => 'cil', 'CiPaw.09G123800' => 'cil', 'CiPaw.11G169700' => 'cil', 'CiPaw.12G118300' => 'cil', 'CiPaw.15G071000' => 'cil', 'CiPaw.15G081900' => 'cil', 'ClCG01G024610' => 'cla', 'ClCG03G006070' => 'cla', 'ClCG05G019250' => 'cla', 'ClCG09G009500' => 'cla', 'ClCG11G008200' => 'cla', 'ClCG11G018080' => 'cla', 'COL.COLO4_17373' => 'col', 'COL.COLO4_22994' => 'col', 'COL.COLO4_26389' => 'col', 'COL.COLO4_27170' => 'col', 'COL.COLO4_31074' => 'col', 'COL.COLO4_31465' => 'col', 'COL.COLO4_36438' => 'col', 'COL.COLO4_36439' => 'col', 'Cpa.g.c38781' => 'cpa', 'Cpa.g.sc128.12' => 'cpa', 'Cpa.g.sc166.7' => 'cpa', 'Cpa.g.sc166.8' => 'cpa', 'Cpa.g.sc20.111' => 'cpa', 'Cpa.g.sc27.31' => 'cpa', 'Cpa.g.sc64.36' => 'cpa', 'Cpa.g.sc64.37' => 'cpa', 'Cpa.g.sc66.49' => 'cpa', 'Cpa.g.sc80.64' => 'cpa', 'CsaV3_1G012320' => 'csa', 'CsaV3_2G008480' => 'csa', 'CsaV3_2G033450' => 'csa', 'CsaV3_3G044830' => 'csa', 'CsaV3_4G033710' => 'csa', 'CsaV3_6G051730' => 'csa', 'CsaV3_7G025350' => 'csa', 'CSS0001067' => 'camsi', 'CSS0005996' => 'camsi', 'CSS0006590' => 'camsi', 'CSS0009673' => 'camsi', 'CSS0010201' => 'camsi', 'CSS0010549' => 'camsi', 'CSS0011364' => 'camsi', 'CSS0014473' => 'camsi', 'CSS0014961' => 'camsi', 'CSS0020191' => 'camsi', 'CSS0021165' => 'camsi', 'CSS0022306' => 'camsi', 'CSS0030591' => 'camsi', 'CSS0030696' => 'camsi', 'CSS0032653' => 'camsi', 'CSS0037487' => 'camsi', 'CSS0041102' => 'camsi', 'CSS0041261' => 'camsi', 'CSS0046246' => 'camsi', 'CSS0049256' => 'camsi', 'DCAR_004075' => 'dca', 'DCAR_011538' => 'dca', 'DCAR_019553' => 'dca', 'DCAR_020952' => 'dca', 'DCAR_021739' => 'dca', 'DCAR_027407' => 'dca', 'DCAR_027913' => 'dca', 'DCAR_028066' => 'dca', 'Dinv05899' => 'din', 'Dinv07563' => 'din', 'Dinv08010' => 'din', 'Dinv14125' => 'din', 'Dinv20172' => 'din', 'Dinv30743' => 'din', 'Dinv31229' => 'din', 'Dinv34162' => 'din', 'Dinv36028' => 'din', 'Dinv39368' => 'din', 'Dinv40565' => 'din', 'Dinv41706' => 'din', 'Duzib052G0089' => 'dzi', 'Duzib116G0641' => 'dzi', 'Duzib132G0069' => 'dzi', 'Duzib132G1219' => 'dzi', 'Duzib147G0278' => 'dzi', 'Duzib160G0480' => 'dzi', 'Duzib170G0661' => 'dzi', 'Duzib177G0591' => 'dzi', 'Duzib187G1353' => 'dzi', 'Duzib192G0858' => 'dzi', 'Duzib192G0883' => 'dzi', 'Duzib213G0506' => 'dzi', 'Duzib235G0289' => 'dzi', 'Duzib251G0422' => 'dzi', 'ECA232G3898' => 'eca', 'ECA233G5950' => 'eca', 'ECA234G1699' => 'eca', 'ECA234G2421' => 'eca', 'ECA236G0426' => 'eca', 'ECA236G4331' => 'eca', 'ECA248G2573' => 'eca', 'EL10Ac1g00077' => 'bvu', 'EL10Ac1g01746' => 'bvu', 'EL10Ac2g03464' => 'bvu', 'EL10Ac4g08176' => 'bvu', 'EL10Ac7g17521' => 'bvu', 'EL10Ac8g20386' => 'bvu', 'EL10Ac9g21343' => 'bvu', 'EL10Ac9g22688' => 'bvu', 'Eucgr.B03434' => 'egr', 'Eucgr.D00618' => 'egr', 'Eucgr.E02395' => 'egr', 'Eucgr.F01129' => 'egr', 'Eucgr.F02622' => 'egr', 'Eucgr.F04207' => 'egr', 'FAN01G0570' => 'fan', 'FAN03G3351' => 'fan', 'FAN06G3702' => 'fan', 'FAN07G2149' => 'fan', 'FAN10G3758' => 'fan', 'FAN11G1170' => 'fan', 'FAN11G2050' => 'fan', 'FAN11G2724' => 'fan', 'FAN12G1700' => 'fan', 'FAN12G2028' => 'fan', 'FAN15G1160' => 'fan', 'FAN15G3063' => 'fan', 'FAN16G2540' => 'fan', 'FAN16G3077' => 'fan', 'FAN16G3624' => 'fan', 'FAN17G0221' => 'fan', 'FAN20G2492' => 'fan', 'FAN20G2905' => 'fan', 'FAN21G0548' => 'fan', 'FAN21G1300' => 'fan', 'FAN22G0077' => 'fan', 'FAN22G1315' => 'fan', 'FAN24G1280' => 'fan', 'FAN24G1445' => 'fan', 'FAN24G3527' => 'fan', 'FAN25G0464' => 'fan', 'FAN25G2885' => 'fan', 'FAN25G3270' => 'fan', 'FAN27G1101' => 'fan', 'FAN27G2846' => 'fan', 'FAN27G3524' => 'fan', 'FvH4_2g11770' => 'fve', 'FvH4_2g15630' => 'fve', 'FvH4_3g05570' => 'fve', 'FvH4_3g09110' => 'fve', 'FvH4_3g19940' => 'fve', 'FvH4_4g04821' => 'fve', 'FvH4_4g31480' => 'fve', 'FvH4_7g01740' => 'fve', 'Glyma.05G130400' => 'gma', 'Glyma.05G156400' => 'gma', 'Glyma.07G197000' => 'gma', 'Glyma.08G085151' => 'gma', 'Glyma.08G114500' => 'gma', 'Glyma.08G300400' => 'gma', 'Glyma.10G215800' => 'gma', 'Glyma.12G224400' => 'gma', 'Glyma.13G179300' => 'gma', 'Glyma.13G218151' => 'gma', 'Glyma.13G238800' => 'gma', 'Glyma.13G276900' => 'gma', 'Glyma.14G078200' => 'gma', 'Glyma.15G074500' => 'gma', 'Glyma.15G094100' => 'gma', 'Glyma.17G247200' => 'gma', 'Glyma.18G120100' => 'gma', 'Glyma.20G176000' => 'gma', 'Gohir.A01G063600' => 'ghi', 'Gohir.A01G170301' => 'ghi', 'Gohir.A02G060500' => 'ghi', 'Gohir.A05G133850' => 'ghi', 'Gohir.A05G161400' => 'ghi', 'Gohir.A06G012900' => 'ghi', 'Gohir.A06G035901' => 'ghi', 'Gohir.A06G127100' => 'ghi', 'Gohir.A06G210500' => 'ghi', 'Gohir.A08G008650' => 'ghi', 'Gohir.A09G072700' => 'ghi', 'Gohir.A09G088301' => 'ghi', 'Gohir.A10G040600' => 'ghi', 'Gohir.A12G036300' => 'ghi', 'Gohir.A12G143350' => 'ghi', 'Gohir.A12G165500' => 'ghi', 'Gohir.A13G145700' => 'ghi', 'Gohir.D01G050000' => 'ghi', 'Gohir.D01G051366' => 'ghi', 'Gohir.D01G161350' => 'ghi', 'Gohir.D02G065900' => 'ghi', 'Gohir.D05G164200' => 'ghi', 'Gohir.D05G355500' => 'ghi', 'Gohir.D06G010400' => 'ghi', 'Gohir.D06G111250' => 'ghi', 'Gohir.D06G132000' => 'ghi', 'Gohir.D06G210500' => 'ghi', 'Gohir.D07G165675' => 'ghi', 'Gohir.D08G062240' => 'ghi', 'Gohir.D08G086101' => 'ghi', 'Gohir.D08G138060' => 'ghi', 'Gohir.D09G072300' => 'ghi', 'Gohir.D10G041400' => 'ghi', 'Gohir.D11G191020' => 'ghi', 'Gohir.D11G212066' => 'ghi', 'Gohir.D12G036300' => 'ghi', 'Gohir.D12G168600' => 'ghi', 'Gohir.D13G150600' => 'ghi', 'Gorai.001G057300' => 'gra', 'Gorai.002G069900' => 'gra', 'Gorai.002G200000' => 'gra', 'Gorai.003G067600' => 'gra', 'Gorai.005G074800' => 'gra', 'Gorai.006G087300' => 'gra', 'Gorai.008G037500' => 'gra', 'Gorai.008G181400' => 'gra', 'Gorai.009G169400' => 'gra', 'Gorai.009G387900' => 'gra', 'Gorai.010G013300' => 'gra', 'Gorai.010G153800' => 'gra', 'Gorai.010G255800' => 'gra', 'Gorai.011G043700' => 'gra', 'Gorai.011G198900' => 'gra', 'Gorai.013G168400' => 'gra', 'GSVIVG01005212001' => 'vvi', 'GSVIVG01006163001' => 'vvi', 'GSVIVG01009625001' => 'vvi', 'GSVIVG01014338001' => 'vvi', 'GSVIVG01020005001' => 'vvi', 'GSVIVG01021450001' => 'vvi', 'GSVIVG01023975001' => 'vvi', 'GSVIVG01034490001' => 'vvi', 'HanXRQChr04g0112071' => 'han', 'HanXRQChr05g0131151' => 'han', 'HanXRQChr09g0262371' => 'han', 'HanXRQChr09g0268401' => 'han', 'HanXRQChr10g0279241' => 'han', 'HanXRQChr10g0297961' => 'han', 'HanXRQChr11g0326231' => 'han', 'HanXRQChr11g0328471' => 'han', 'HanXRQChr16g0507941' => 'han', 'HanXRQChr17g0560211' => 'han', 'Haze_02108' => 'cav', 'Haze_02428' => 'cav', 'Haze_05593' => 'cav', 'Haze_06448' => 'cav', 'Haze_09427' => 'cav', 'Haze_12022' => 'cav', 'Haze_17612' => 'cav', 'Haze_17928' => 'cav', 'Hma1.2p1_0032F.1_g019250' => 'hma', 'Hma1.2p1_0163F.1_g072690' => 'hma', 'Hma1.2p1_0265F.1_g106710' => 'hma', 'Hma1.2p1_0286F.1_g113970' => 'hma', 'Hma1.2p1_0363F.1_g136640' => 'hma', 'Hma1.2p1_0584F.1_g183470' => 'hma', 'Hma1.2p1_0885F.1_g232570' => 'hma', 'HPP92_006022' => 'vpl', 'HPP92_007320' => 'vpl', 'HPP92_011521' => 'vpl', 'HPP92_019387' => 'vpl', 'HPP92_024038' => 'vpl', 'Hund05891' => 'sun', 'Hund06450' => 'sun', 'Hund12053' => 'sun', 'Hund16800' => 'sun', 'Hund21222' => 'sun', 'Hund22896' => 'sun', 'Hund23746' => 'sun', 'Hund27083' => 'sun', 'Lalb_Chr02g0141831' => 'lal', 'Lalb_Chr02g0141841' => 'lal', 'Lalb_Chr05g0220411' => 'lal', 'Lalb_Chr06g0162081' => 'lal', 'Lalb_Chr09g0327651' => 'lal', 'Lalb_Chr13g0295051' => 'lal', 'Lalb_Chr15g0086801' => 'lal', 'Lalb_Chr16g0383781' => 'lal', 'Lalb_Chr16g0383791' => 'lal', 'Lalb_Chr18g0055441' => 'lal', 'Lalb_Chr18g0059611' => 'lal', 'Lalb_Chr20g0109661' => 'lal', 'Lalb_Chr20g0109831' => 'lal', 'Lalb_Chr20g0121871' => 'lal', 'Lalb_Chr22g0355361' => 'lal', 'Lalb_Chr25g0286371' => 'lal', 'Lj1A1187G43' => 'lonja', 'Lj1A1205T50' => 'lonja', 'Lj1A800G33' => 'lonja', 'Lj1C1187T7' => 'lonja', 'Lj1C843T11' => 'lonja', 'Lj1g0010940' => 'lja', 'Lj2A288T69' => 'lonja', 'Lj3g0024276' => 'lja', 'Lj4A47T76' => 'lonja', 'Lj4g0005805' => 'lja', 'Lj4g0006097' => 'lja', 'Lj4g0008528' => 'lja', 'Lj4g0024907' => 'lja', 'Lj5g0012472' => 'lja', 'Lj5g0018648' => 'lja', 'Lj6C789G1' => 'lonja', 'Lj6g0004000' => 'lja', 'Lj7A292G67' => 'lonja', 'Lj7A292T64' => 'lonja', 'Lj9A400T58' => 'lonja', 'Lsat_1_v5_gn_1_126181' => 'lsa', 'Lsat_1_v5_gn_4_123041' => 'lsa', 'Lsat_1_v5_gn_4_133620' => 'lsa', 'Lsat_1_v5_gn_4_53221' => 'lsa', 'Lsat_1_v5_gn_4_71961' => 'lsa', 'Lsat_1_v5_gn_7_105241' => 'lsa', 'Lsat_1_v5_gn_7_21361' => 'lsa', 'Lsat_1_v5_gn_7_28860' => 'lsa', 'Lsat_1_v5_gn_7_31260' => 'lsa', 'Lsat_1_v5_gn_8_52801' => 'lsa', 'Manes.02G191400' => 'mes', 'Manes.03G110100' => 'mes', 'Manes.04G071100' => 'mes', 'Manes.05G100500' => 'mes', 'Manes.05G164700' => 'mes', 'Manes.15G087000' => 'mes', 'Manes.15G121500' => 'mes', 'Manes.16G028300' => 'mes', 'Manes.17G046100' => 'mes', 'Manes.17G069800' => 'mes', 'Manes.18G100500' => 'mes', 'Mapoly0002s0109' => 'mpo', 'Mapoly0024s0007' => 'mpo', 'Mapoly0089s0032' => 'mpo', 'MBI04_g42241_MAGBIO' => 'mbi', 'MBI05_g11988_MAGBIO' => 'mbi', 'MBI05_g35452_MAGBIO' => 'mbi', 'MBI07_g30179_MAGBIO' => 'mbi', 'MBI07_g35859_MAGBIO' => 'mbi', 'MBI07_g35860_MAGBIO' => 'mbi', 'MBI07_g37166_MAGBIO' => 'mbi', 'MBI08_g18172_MAGBIO' => 'mbi', 'MBI09_g08441_MAGBIO' => 'mbi', 'MBI13_g01676_MAGBIO' => 'mbi', 'MBI14_g42955_MAGBIO' => 'mbi', 'MBI16_g13161_MAGBIO' => 'mbi', 'MBI17_g27204_MAGBIO' => 'mbi', 'MBI19_g21595_MAGBIO' => 'mbi', 'MD00G1148400' => 'mdo', 'MD02G1301200' => 'mdo', 'MD03G1227800' => 'mdo', 'MD05G1041100' => 'mdo', 'MD05G1124800' => 'mdo', 'MD05G1284000' => 'mdo', 'MD05G1338800' => 'mdo', 'MD05G1338900' => 'mdo', 'MD07G1022800' => 'mdo', 'MD10G1047500' => 'mdo', 'MD10G1127500' => 'mdo', 'MD10G1262300' => 'mdo', 'MD10G1293800' => 'mdo', 'MD16G1074300' => 'mdo', 'Medtr1g021670' => 'mtr', 'Medtr1g096320' => 'mtr', 'Medtr2g013690' => 'mtr', 'Medtr2g019450' => 'mtr', 'Medtr2g085170' => 'mtr', 'Medtr4g088785' => 'mtr', 'Medtr8g055930' => 'mtr', 'Medtr8g085850' => 'mtr', 'MELO3C002605.2' => 'cme', 'MELO3C003891.2' => 'cme', 'MELO3C004012.2' => 'cme', 'MELO3C007134.2' => 'cme', 'MELO3C008118.2' => 'cme', 'MELO3C016700.2' => 'cme', 'MELO3C024127.2' => 'cme', 'MELO3C033361.2' => 'cme', 'MELO3C033362.2' => 'cme', 'Migut.C00430' => 'egut', 'Migut.C01246' => 'egut', 'Migut.E00101' => 'egut', 'Migut.H01486' => 'egut', 'Migut.H01939' => 'egut', 'Migut.K00360' => 'egut', 'Migut.M00910' => 'egut', 'Migut.M01139' => 'egut', 'Migut.N02677' => 'egut', 'MSTRG.13252' => 'ama', 'MSTRG.14701' => 'ama', 'MSTRG.1521' => 'ama', 'MSTRG.15884' => 'ama', 'MSTRG.16242' => 'ama', 'MSTRG.22285' => 'ama', 'MSTRG.22444' => 'ama', 'MSTRG.2349' => 'ama', 'MSTRG.26308' => 'ama', 'MSTRG.28296' => 'ama', 'MSTRG.9895' => 'ama', 'Nitab4.5_0000110g0060' => 'nta', 'Nitab4.5_0000420g0130' => 'nta', 'Nitab4.5_0000422g0030' => 'nta', 'Nitab4.5_0000560g0180' => 'nta', 'Nitab4.5_0000703g0100' => 'nta', 'Nitab4.5_0000786g0200' => 'nta', 'Nitab4.5_0001336g0020' => 'nta', 'Nitab4.5_0001796g0030' => 'nta', 'Nitab4.5_0003348g0060' => 'nta', 'Nitab4.5_0003698g0040' => 'nta', 'Nitab4.5_0003942g0090' => 'nta', 'Nitab4.5_0004775g0070' => 'nta', 'Nitab4.5_0004864g0030' => 'nta', 'Nitab4.5_0005615g0020' => 'nta', 'Nitab4.5_0009288g0030' => 'nta', 'Nitab4.5_0009341g0010' => 'nta', 'Nitab4.5_0009535g0010' => 'nta', 'Nn1g03995' => 'nnu', 'Nn1g04100' => 'nnu', 'Nn1g06530' => 'nnu', 'Nn3g16404' => 'nnu', 'Nn3g17212' => 'nnu', 'Nn3g20776' => 'nnu', 'Nn3g21923' => 'nnu', 'Nn5g27737' => 'nnu', 'Nn5g29461' => 'nnu', 'Nn7g38355' => 'nnu', 'Nn8g39873' => 'nnu', 'Oeu000548.2' => 'oeu', 'Oeu004672.1' => 'oeu', 'Oeu015605.2' => 'oeu', 'Oeu016092.1' => 'oeu', 'Oeu017879.3' => 'oeu', 'Oeu024910.1' => 'oeu', 'Oeu028965.1' => 'oeu', 'Oeu031269.1' => 'oeu', 'Oeu031270.1' => 'oeu', 'Oeu032535.1' => 'oeu', 'Oeu034151.1' => 'oeu', 'Oeu034152.1' => 'oeu', 'Oeu034588.2' => 'oeu', 'Oeu050846.1' => 'oeu', 'Oeu050849.2' => 'oeu', 'Oeu051063.2' => 'oeu', 'Oeu052368.1' => 'oeu', 'Oeu052370.1' => 'oeu', 'Os01g0210400' => 'osa', 'Os01g0304300' => 'osa', 'Os01g0749100' => 'osa', 'Os02g0745800' => 'osa', 'Os03g0769050' => 'osa', 'Os05g0531500' => 'osa', 'Os06g0724300' => 'osa', 'Os11g0198100' => 'osa', 'Peaxi162Scf00069g01425' => 'pax', 'Peaxi162Scf00280g00811' => 'pax', 'Peaxi162Scf00310g00615' => 'pax', 'Peaxi162Scf00362g00542' => 'pax', 'Peaxi162Scf00461g00310' => 'pax', 'Peaxi162Scf00530g00118' => 'pax', 'Peaxi162Scf00541g00057' => 'pax', 'Peaxi162Scf00661g00017' => 'pax', 'Peaxi162Scf00926g00027' => 'pax', 'Peaxi162Scf01064g00263' => 'pax', 'Peaxi162Scf01211g00135' => 'pax', 'PGR004G2336' => 'pgr', 'PGR042G0327' => 'pgr', 'PGR042G1957' => 'pgr', 'PGR042G2003' => 'pgr', 'PGR042G3929' => 'pgr', 'PGR083G1137' => 'pgr', 'PGR083G1364' => 'pgr', 'PGSC0003DMG400003381' => 'stu', 'PGSC0003DMG400003417' => 'stu', 'PGSC0003DMG400008981' => 'stu', 'PGSC0003DMG400012417' => 'stu', 'PGSC0003DMG400012823' => 'stu', 'PGSC0003DMG400016885' => 'stu', 'PGSC0003DMG400022812' => 'stu', 'PGSC0003DMG400029726' => 'stu', 'PGSC0003DMG401009243' => 'stu', 'PGSC0003DMG401031505' => 'stu', 'PGSC0003DMG402031505' => 'stu', 'Phvul.001G017600' => 'pvu', 'Phvul.002G193500' => 'pvu', 'Phvul.002G228900' => 'pvu', 'Phvul.002G236800' => 'pvu', 'Phvul.003G049500' => 'pvu', 'Phvul.005G072000' => 'pvu', 'Phvul.006G164800' => 'pvu', 'Phvul.006G185100' => 'pvu', 'Phvul.007G090000' => 'pvu', 'Potri.001G399800' => 'ptr', 'Potri.002G149900' => 'ptr', 'Potri.004G044100' => 'ptr', 'Potri.004G177600' => 'ptr', 'Potri.009G138000' => 'ptr', 'Potri.010G094000' => 'ptr', 'Potri.011G053000' => 'ptr', 'Potri.011G119300' => 'ptr', 'Potri.013G113700' => 'ptr', 'Potri.018G107800' => 'ptr', 'Potri.019G084100' => 'ptr', 'Pp3c14_23720' => 'ppa', 'Pp3c16_6340' => 'ppa', 'Pp3c23_13420' => 'ppa', 'Pp3c24_2740' => 'ppa', 'Pp3c25_860' => 'ppa', 'Pp3c8_21750' => 'ppa', 'Prupe.1G273000' => 'ppe', 'Prupe.1G273700' => 'ppe', 'Prupe.1G274100' => 'ppe', 'Prupe.2G023300' => 'ppe', 'Prupe.4G048000' => 'ppe', 'Prupe.4G080400' => 'ppe', 'Prupe.4G181200' => 'ppe', 'Prupe.8G056900' => 'ppe', 'Prupe.8G168700' => 'ppe', 'Psat1g189080' => 'psa', 'Psat1g204760' => 'psa', 'Psat4g175560' => 'psa', 'Psat4g177720' => 'psa', 'Psat5g244240' => 'psa', 'Psat6g010720' => 'psa', 'Psat6g187200' => 'psa', 'Psat7g072040' => 'psa', 'PSO017G3501' => 'pso', 'PSO063G2148' => 'pso', 'PSO063G5608' => 'pso', 'PSO210G6392' => 'pso', 'PSO541G2319' => 'pso', 'PSO541G2836' => 'pso', 'PSO541G4012' => 'pso', 'PSO541G6253' => 'pso', 'PSO675G0580' => 'pso', 'PSO675G0856' => 'pso', 'PSO675G5635' => 'pso', 'PSO675G9157' => 'pso', 'PSO832G1660' => 'pso', 'PSO832G1969' => 'pso', 'QL02p007186' => 'qlo', 'QL02p033904' => 'qlo', 'QL03p064391' => 'qlo', 'QL05p040593' => 'qlo', 'QL05p058242' => 'qlo', 'QL08p021825' => 'qlo', 'QL11p004981' => 'qlo', 'RcHm_v2.0_Chr1g0318301' => 'rch', 'RcHm_v2.0_Chr4g0418501' => 'rch', 'RcHm_v2.0_Chr4g0439971' => 'rch', 'RcHm_v2.0_Chr5g0008541' => 'rch', 'RcHm_v2.0_Chr5g0014101' => 'rch', 'RcHm_v2.0_Chr5g0014131' => 'rch', 'RcHm_v2.0_Chr5g0033621' => 'rch', 'RcHm_v2.0_Chr6g0272041' => 'rch', 'RcHm_v2.0_Chr6g0278831' => 'rch', 'Rhsim02G0130400' => 'rsi', 'Rhsim02G0171100' => 'rsi', 'Rhsim05G0053000' => 'rsi', 'Rhsim05G0053100' => 'rsi', 'Rhsim06G0096500' => 'rsi', 'Rhsim06G0096600' => 'rsi', 'Rhsim06G0199100' => 'rsi', 'Rhsim12G0062300' => 'rsi', 'Rhsim12G0062800' => 'rsi', 'Sabra02G0118600' => 'sbr', 'Sabra04G0027300' => 'sbr', 'Sabra04G0119500' => 'sbr', 'Sabra08G0112500' => 'sbr', 'Sabra11G0036800' => 'sbr', 'Sabra11G0103800' => 'sbr', 'Sabra13G0096300' => 'sbr', 'Sabra16G0262300' => 'sbr', 'Sabra18G0091700' => 'sbr', 'Sabra19G0095400' => 'sbr', 'SalBow6G3080' => 'sbo', 'SalBow7G1157' => 'sbo', 'SalBow7G2123' => 'sbo', 'SalBow7G2285' => 'sbo', 'SalBow7G3537' => 'sbo', 'SalBow8G2947' => 'sbo', 'SalBow8G4463' => 'sbo', 'SalBow8G5466' => 'sbo', 'Sc01g0001750' => 'sci', 'Sc02g0006640' => 'sci', 'Sc02g0006670' => 'sci', 'Sc04g0008220' => 'sci', 'Sc05g0006190' => 'sci', 'Sc08g0002760' => 'sci', 'Sc17g0006170' => 'sci', 'Sc22g0002050' => 'sci', 'Sc23g0001190' => 'sci', 'Sc24g0000980' => 'sci', 'Sed0006245' => 'sed', 'Sed0007543' => 'sed', 'Sed0009411' => 'sed', 'Sed0010765' => 'sed', 'Sed0012944' => 'sed', 'Sed0014682' => 'sed', 'Sed0016174' => 'sed', 'Sed0016796' => 'sed', 'Sed0020317' => 'sed', 'Sed0021467' => 'sed', 'SEGI_01316' => 'sgi', 'SEGI_03374' => 'sgi', 'SEGI_16265' => 'sgi', 'SEGI_18569' => 'sgi', 'SEGI_20351' => 'sgi', 'SEGI_26395' => 'sgi', 'SEGI_29469' => 'sgi', 'SEGI_34771' => 'sgi', 'SEGI_36769' => 'sgi', 'SEGI_37139' => 'sgi', 'SGA_v2.0_scaffold100G29687' => 'sas', 'SGA_v2.0_scaffold118G32472' => 'sas', 'SGA_v2.0_scaffold14G07051' => 'sas', 'SGA_v2.0_scaffold183G39845' => 'sas', 'SGA_v2.0_scaffold1G00174' => 'sas', 'SGA_v2.0_scaffold22G09714' => 'sas', 'SGA_v2.0_scaffold333G48992' => 'sas', 'SGA_v2.0_scaffold46G17491' => 'sas', 'SGA_v2.0_scaffold49G18294' => 'sas', 'SGA_v2.0_scaffold63G21658' => 'sas', 'SHI01741' => 'shi', 'SHI05771' => 'shi', 'SHI18077' => 'shi', 'SHI20525' => 'shi', 'SHI20527' => 'shi', 'SHI20528' => 'shi', 'SMO172G0185' => 'smo', 'SMO198G0020' => 'smo', 'SMO351G0006' => 'smo', 'SMO356G0118' => 'smo', 'SMO358G0296' => 'smo', 'SMO367G0079' => 'smo', 'SMO367G1277' => 'smo', 'Solyc01g014220.3' => 'sly', 'Solyc01g111770.2' => 'sly', 'Solyc02g078180.3' => 'sly', 'Solyc03g006430.3' => 'sly', 'Solyc03g006456.1' => 'sly', 'Solyc03g079860.2' => 'sly', 'Solyc04g079770.3' => 'sly', 'Solyc05g007430.4' => 'sly', 'Solyc07g063150.3' => 'sly', 'Solyc08g016620.3' => 'sly', 'Solyc09g057590.3' => 'sly', 'Solyc09g057600.1' => 'sly', 'Solyc10g009050.3' => 'sly', 'Solyc11g017420.2' => 'sly', 'Sopen01g053810' => 'spe', 'Sopen02g023040' => 'spe', 'Sopen03g002440' => 'spe', 'Sopen04g033350' => 'spe', 'Sopen05g003310' => 'spe', 'Sopen07g004050' => 'spe', 'Sopen07g031340' => 'spe', 'Sopen08g006990' => 'spe', 'Sopen10g004830' => 'spe', 'Sopen11g009370' => 'spe', 'Sp1g24450' => 'spa', 'Sp1g29670' => 'spa', 'Sp1g39600' => 'spa', 'Sp2g11080' => 'spa', 'Sp2g13970' => 'spa', 'Sp4g16130' => 'spa', 'Sp6g13080' => 'spa', 'Sp7g37270' => 'spa', 'TAR371G0065' => 'tar', 'TAR376G0340' => 'tar', 'TAR376G0435' => 'tar', 'TAR381G0002' => 'tar', 'TAR381G1236' => 'tar', 'TAR624G0055' => 'tar', 'TAR624G0324' => 'tar', 'TAR624G0696' => 'tar', 'TAR624G0906' => 'tar', 'TAR625G0107' => 'tar', 'TAR626G0015' => 'tar', 'TAR626G1356' => 'tar', 'TAR627G0888' => 'tar', 'TAR628G0399' => 'tar', 'TAR628G1327' => 'tar', 'TAR629G2831' => 'tar', 'TAR629G2874' => 'tar', 'TAR633G1432' => 'tar', 'TAR633G2771' => 'tar', 'THA.LOC104803394' => 'tha', 'THA.LOC104805153' => 'tha', 'THA.LOC104806784' => 'tha', 'THA.LOC104810473' => 'tha', 'THA.LOC104813100' => 'tha', 'THA.LOC104814215' => 'tha', 'THA.LOC104815554' => 'tha', 'THA.LOC104820544' => 'tha', 'THA.LOC104824754' => 'tha', 'THA.LOC104827717' => 'tha', 'Thecc.02G031400' => 'tca', 'Thecc.02G055900' => 'tca', 'Thecc.02G350800' => 'tca', 'Thecc.06G150900' => 'tca', 'Thecc.06G186600' => 'tca', 'Thecc.07G089600' => 'tca', 'Thecc.08G020400' => 'tca', 'Thecc.08G182100' => 'tca', 'Thhalv10000873m.g' => 'esa', 'Thhalv10004185m.g' => 'esa', 'Thhalv10006981m.g' => 'esa', 'Thhalv10007204m.g' => 'esa', 'Thhalv10011374m.g' => 'esa', 'Thhalv10013482m.g' => 'esa', 'Thhalv10017801m.g' => 'esa', 'Thhalv10024983m.g' => 'esa', 'TPR.G12072' => 'tpr', 'TPR.G15769' => 'tpr', 'TPR.G16504' => 'tpr', 'TPR.G16506' => 'tpr', 'TPR.G24345' => 'tpr', 'TPR.G26666' => 'tpr', 'TPR.G27320' => 'tpr', 'TPR.G31819' => 'tpr', 'TPR.G38879' => 'tpr', 'TPR.G39015' => 'tpr', 'TPR.G8819' => 'tpr', 'TWI09G0924' => 'twi', 'TWI12G0811' => 'twi', 'TWI12G1294' => 'twi', 'TWI31G0150' => 'twi', 'TWI36G1262' => 'twi', 'TWI38G1287' => 'twi', 'TWI38G1633' => 'twi', 'TWI38G1982' => 'twi', 'TWI39G0116' => 'twi', 'TWI60G1011' => 'twi', 'TWI63G0171' => 'twi', 'TWI73G0839' => 'twi', 'TWI79G1511' => 'twi', 'unitig_0.g915' => 'ugi', 'unitig_0.g916' => 'ugi', 'unitig_21.g20219' => 'ugi', 'unitig_21.g20416' => 'ugi', 'unitig_578.g16132' => 'ugi', 'unitig_578.g16718' => 'ugi', 'unitig_62.g23481' => 'ugi', 'unitig_744.g24535' => 'ugi', 'unitig_749.g13525' => 'ugi', 'vmacro01248' => 'vma', 'vmacro02290' => 'vma', 'vmacro10946' => 'vma', 'vmacro11865' => 'vma', 'vmacro12493' => 'vma', 'vmacro17322' => 'vma', 'vmacro21599' => 'vma', 'vmacro23041' => 'vma', 'VMungo0251G0004' => 'vmu', 'VMungo0251G2639' => 'vmu', 'VMungo0251G2967' => 'vmu', 'VMungo0540G0864' => 'vmu', 'VMungo0540G1569' => 'vmu', 'VMungo0647G0317' => 'vmu', 'VMungo0720G1373' => 'vmu', 'VMungo0720G1508' => 'vmu', 'VMungo1080G0485' => 'vmu', 'VMungo1215G3177' => 'vmu', 'Zm00001eb112600' => 'zma', 'Zm00001eb120220' => 'zma', 'Zm00001eb153240' => 'zma', 'Zm00001eb168880' => 'zma', 'Zm00001eb213920' => 'zma', 'Zm00001eb228280' => 'zma', 'Zm00001eb254580' => 'zma', 'Zm00001eb272180' => 'zma', 'Zm00001eb293190' => 'zma', 'Zm00001eb322930' => 'zma', 'Zm00001eb353360' => 'zma', 'Zm00001eb353390' => 'zma', 'Zm00001eb353430' => 'zma', 'Zm00001eb353440' => 'zma', 'Zm00001eb353780' => 'zma' ), 'gf_id' => 'HOM05D000499', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000499' ), 'data_identifier' => 'HOM05D000499', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000499', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1066', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p29780' => 'bna', 'A02p33180' => 'bna', 'A03p16470' => 'bna', 'A03p66010' => 'bna', 'A04p25970' => 'bna', 'A06p01270' => 'bna', 'A06p46080' => 'bna', 'A07p11400' => 'bna', 'A08p01840' => 'bna', 'A08p08230' => 'bna', 'A08p25740' => 'bna', 'A09p32070' => 'bna', 'A09p37830' => 'bna', 'A09p42840' => 'bna', 'A09p42850' => 'bna', 'Aa31LG10G2060' => 'aar', 'Aa31LG2G7410' => 'aar', 'Aa31LG6G10200' => 'aar', 'Aa31LG6G16680' => 'aar', 'Aa31LG6G8470' => 'aar', 'Aa31LG9G12730' => 'aar', 'Aa31LG9G13680' => 'aar', 'Aa31LG9G14920' => 'aar', 'Aa31LG9G6650' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4977' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5467' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3254' => 'aag', 'Actinidia02578' => 'ach', 'Actinidia07693' => 'ach', 'Actinidia08413' => 'ach', 'Actinidia08414' => 'ach', 'Actinidia15289' => 'ach', 'Actinidia19871' => 'ach', 'Actinidia21475' => 'ach', 'Actinidia22576' => 'ach', 'Actinidia28327' => 'ach', 'Actinidia32491' => 'ach', 'Actinidia39463' => 'ach', 'Actinidia39571' => 'ach', 'Ah.01g013750' => 'amhyb', 'Ah.01g023210' => 'amhyb', 'Ah.04g164850' => 'amhyb', 'Ah.05g178060' => 'amhyb', 'Ah.07g204270' => 'amhyb', 'Ah.07g208480' => 'amhyb', 'Ah.09g237410' => 'amhyb', 'Ah.14g089460' => 'amhyb', 'AL1G41790' => 'aly', 'AL1G49050' => 'aly', 'AL1G53810' => 'aly', 'AL1G61400' => 'aly', 'AL4G18580' => 'aly', 'AL5G12510' => 'aly', 'AL5G12540' => 'aly', 'AL6G43230' => 'aly', 'AL7G10370' => 'aly', 'AL7G19250' => 'aly', 'AL8G12240' => 'aly', 'AL8G18540' => 'aly', 'Aqoxy1G02409' => 'aox', 'Aqoxy2G03993' => 'aox', 'Aqoxy3G03357' => 'aox', 'Aqoxy4G00785' => 'aox', 'Aqoxy5G02598' => 'aox', 'Aqoxy6G00132' => 'aox', 'Aqoxy7G01776' => 'aox', 'Aqoxy7G02316' => 'aox', 'Aqoxy7G03973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.12AFKW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B8730' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27IQR1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3F75VG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3RE0GA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41TCQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.527VTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FIR39' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5W8UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DA38EV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ63HS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H1I32C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HC27T5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4M8AP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7N3CZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9UVDZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LS1NQA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT1D4B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SKC4TM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCFV76' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF9Q1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQWD9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1ZM88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WE07RT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YCK7VH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJE6Q6' => 'arhy', 'AT1G28240' => 'ath', 'AT1G34550' => 'ath', 'AT1G53040' => 'ath', 'AT2G02910' => 'ath', 'AT4G09630' => 'ath', 'AT4G38500' => 'ath', 'AT5G42660' => 'ath', 'AT5G46220' => 'ath', 'ATR0152G026' => 'atr', 'ATR0564G343' => 'atr', 'ATR0706G151' => 'atr', 'ATR0733G207' => 'atr', 'ATR0751G234' => 'atr', 'ATR0807G048' => 'atr', 'ATR1091G084' => 'atr', 'Atru.chr10.1229' => 'acertr', 'Atru.chr10.1230' => 'acertr', 'Atru.chr10.1874' => 'acertr', 'Atru.chr11.1808' => 'acertr', 'Atru.chr13.1795' => 'acertr', 'Atru.chr13.570' => 'acertr', 'Atru.chr2.2608' => 'acertr', 'Atru.chr2.2609' => 'acertr', 'Atru.chr5.3428' => 'acertr', 'Atru.chr8.1171' => 'acertr', 'AUR62004651' => 'cqu', 'AUR62008675' => 'cqu', 'AUR62010014' => 'cqu', 'AUR62013004' => 'cqu', 'AUR62014825' => 'cqu', 'AUR62015015' => 'cqu', 'AUR62015151' => 'cqu', 'AUR62017020' => 'cqu', 'AUR62019422' => 'cqu', 'AUR62023570' => 'cqu', 'AUR62025571' => 'cqu', 'AUR62029098' => 'cqu', 'AUR62033863' => 'cqu', 'AUR62034296' => 'cqu', 'AUR62040075' => 'cqu', 'BcaB02g07334' => 'bca', 'BcaB02g10575' => 'bca', 'BcaB03g12119' => 'bca', 'BcaB03g12120' => 'bca', 'BcaB03g13945' => 'bca', 'BcaB04g17123' => 'bca', 'BcaB04g17867' => 'bca', 'BcaB04g19839' => 'bca', 'BcaB07g30317' => 'bca', 'BcaB07g32432' => 'bca', 'BcaB07g33362' => 'bca', 'BcaB08g36611' => 'bca', 'BcaC01g00028' => 'bca', 'BcaC01g01356' => 'bca', 'BcaC01g02034' => 'bca', 'BcaC01g06051' => 'bca', 'BcaC03g16839' => 'bca', 'BcaC03g17176' => 'bca', 'BcaC05g26829' => 'bca', 'BcaC06g31490' => 'bca', 'BcaC06g35344' => 'bca', 'BcaC06g36570' => 'bca', 'BcaC07g37537' => 'bca', 'BcaC08g43491' => 'bca', 'BcaC08g43773' => 'bca', 'BcaNung00234' => 'bca', 'BcaNung01982' => 'bca', 'BcaNung03707' => 'bca', 'BcaNung06454' => 'bca', 'BolC2t10762H' => 'bol', 'BolC2t11191H' => 'bol', 'BolC3t14322H' => 'bol', 'BolC3t19747H' => 'bol', 'BolC3t21425H' => 'bol', 'BolC4t27800H' => 'bol', 'BolC5t31423H' => 'bol', 'BolC6t35951H' => 'bol', 'BolC6t36282H' => 'bol', 'BolC7t40678H' => 'bol', 'BolC7t40679H' => 'bol', 'BolC7t42222H' => 'bol', 'BolC7t43492H' => 'bol', 'BolC7t46785H' => 'bol', 'BolC8t47853H' => 'bol', 'BolC9t56805H' => 'bol', 'BraA02t08000Z' => 'bra', 'BraA02t08341Z' => 'bra', 'BraA03t10936Z' => 'bra', 'BraA03t15657Z' => 'bra', 'BraA04t18100Z' => 'bra', 'BraA05t20523Z' => 'bra', 'BraA06t23353Z' => 'bra', 'BraA06t27473Z' => 'bra', 'BraA06t27769Z' => 'bra', 'BraA07t28928Z' => 'bra', 'BraA08t32236Z' => 'bra', 'BraA08t32841Z' => 'bra', 'BraA08t34524Z' => 'bra', 'BraA09t38742Z' => 'bra', 'BraA09t39295Z' => 'bra', 'C02p47180' => 'bna', 'C02p50990' => 'bna', 'C03p19360' => 'bna', 'C03p74950' => 'bna', 'C03p91000' => 'bna', 'C04p63260' => 'bna', 'C05p27050' => 'bna', 'C06p08750' => 'bna', 'C06p11490' => 'bna', 'C07p02820' => 'bna', 'C07p17180' => 'bna', 'C07p29440' => 'bna', 'C07p63730' => 'bna', 'C09p39260' => 'bna', 'CAN.G1164.34' => 'can', 'CAN.G1164.39' => 'can', 'CAN.G1530.3' => 'can', 'CAN.G162.61' => 'can', 'CAN.G176.6' => 'can', 'CAN.G289.49' => 'can', 'CAN.G370.21' => 'can', 'CAN.G370.22' => 'can', 'CAN.G371.117' => 'can', 'CAN.G58.37' => 'can', 'CAN.G588.98' => 'can', 'CANSAT21G2266' => 'cansat', 'CANSAT25G2799' => 'cansat', 'CANSAT35G0862' => 'cansat', 'CANSAT35G1704' => 'cansat', 'CANSAT35G1760' => 'cansat', 'CANSAT56G3971' => 'cansat', 'CANSAT56G4116' => 'cansat', 'CANSAT80G1259' => 'cansat', 'CARHR027730' => 'chi', 'CARHR033880' => 'chi', 'CARHR043270' => 'chi', 'CARHR145330' => 'chi', 'CARHR145340' => 'chi', 'CARHR175570' => 'chi', 'CARHR181570' => 'chi', 'CARHR258470' => 'chi', 'CARHR260490' => 'chi', 'CARHR294220' => 'chi', 'Carub.0001s2668' => 'cru', 'Carub.0001s3257' => 'cru', 'Carub.0001s4220' => 'cru', 'Carub.0005s0179' => 'cru', 'Carub.0006s2807' => 'cru', 'Carub.0007s0039' => 'cru', 'Carub.0008s0169' => 'cru', 'Carub.0008s0636' => 'cru', 'Ca_00338_v3' => 'car', 'Ca_00542_v3' => 'car', 'Ca_01844_v3' => 'car', 'Ca_10611_v3' => 'car', 'Ca_13326_v3' => 'car', 'Ca_17944_v3' => 'car', 'Ca_18546_v3' => 'car', 'Ca_24219_v3' => 'car', 'Ca_29972_v3' => 'car', 'CBR_g3681' => 'cbr', 'CBR_g40021' => 'cbr', 'Cc01_g08140' => 'ccan', 'Cc02_g13410' => 'ccan', 'Cc02_g37480' => 'ccan', 'Cc05_g12030' => 'ccan', 'Cc09_g03370' => 'ccan', 'Cc09_g10300' => 'ccan', 'Cc10_g03530' => 'ccan', 'Cc10_g11380' => 'ccan', 'CDE01G0176' => 'cde', 'CDE02G0675' => 'cde', 'CDE02G0942' => 'cde', 'CDE02G1153' => 'cde', 'CDE02G4177' => 'cde', 'CDE04G2117' => 'cde', 'CDE04G2736' => 'cde', 'CDE08G1161' => 'cde', 'CDE09G1238' => 'cde', 'Cfa000467' => 'cfa', 'Cfa000947' => 'cfa', 'Cfa004969' => 'cfa', 'Cfa005284' => 'cfa', 'Cfa008993' => 'cfa', 'Cfa018187' => 'cfa', 'Cfa018454' => 'cfa', 'Cfa020585' => 'cfa', 'Ciclev10000424m.g' => 'ccl', 'Ciclev10003605m.g' => 'ccl', 'Ciclev10007828m.g' => 'ccl', 'Ciclev10014620m.g' => 'ccl', 'Ciclev10015169m.g' => 'ccl', 'Ciclev10018291m.g' => 'ccl', 'Ciclev10028256m.g' => 'ccl', 'Ciclev10033822m.g' => 'ccl', 'CiPaw.05G060300' => 'cil', 'CiPaw.05G085000' => 'cil', 'CiPaw.06G083700' => 'cil', 'CiPaw.06G120300' => 'cil', 'CiPaw.09G060500' => 'cil', 'CiPaw.09G123800' => 'cil', 'CiPaw.11G169700' => 'cil', 'CiPaw.12G118300' => 'cil', 'CiPaw.15G071000' => 'cil', 'CiPaw.15G081900' => 'cil', 'ClCG01G024610' => 'cla', 'ClCG03G006070' => 'cla', 'ClCG05G019250' => 'cla', 'ClCG09G009500' => 'cla', 'ClCG11G008200' => 'cla', 'ClCG11G018080' => 'cla', 'COL.COLO4_17373' => 'col', 'COL.COLO4_22994' => 'col', 'COL.COLO4_26389' => 'col', 'COL.COLO4_27170' => 'col', 'COL.COLO4_31074' => 'col', 'COL.COLO4_31465' => 'col', 'COL.COLO4_36438' => 'col', 'COL.COLO4_36439' => 'col', 'Cpa.g.c38781' => 'cpa', 'Cpa.g.sc128.12' => 'cpa', 'Cpa.g.sc166.7' => 'cpa', 'Cpa.g.sc166.8' => 'cpa', 'Cpa.g.sc20.111' => 'cpa', 'Cpa.g.sc27.31' => 'cpa', 'Cpa.g.sc64.36' => 'cpa', 'Cpa.g.sc64.37' => 'cpa', 'Cpa.g.sc66.49' => 'cpa', 'Cpa.g.sc80.64' => 'cpa', 'CsaV3_1G012320' => 'csa', 'CsaV3_2G008480' => 'csa', 'CsaV3_2G033450' => 'csa', 'CsaV3_3G044830' => 'csa', 'CsaV3_4G033710' => 'csa', 'CsaV3_6G051730' => 'csa', 'CsaV3_7G025350' => 'csa', 'CSS0001067' => 'camsi', 'CSS0005996' => 'camsi', 'CSS0006590' => 'camsi', 'CSS0009673' => 'camsi', 'CSS0010201' => 'camsi', 'CSS0010549' => 'camsi', 'CSS0011364' => 'camsi', 'CSS0014473' => 'camsi', 'CSS0014961' => 'camsi', 'CSS0020191' => 'camsi', 'CSS0021165' => 'camsi', 'CSS0022306' => 'camsi', 'CSS0030591' => 'camsi', 'CSS0030696' => 'camsi', 'CSS0032653' => 'camsi', 'CSS0037487' => 'camsi', 'CSS0041102' => 'camsi', 'CSS0041261' => 'camsi', 'CSS0046246' => 'camsi', 'CSS0049256' => 'camsi', 'DCAR_004075' => 'dca', 'DCAR_011538' => 'dca', 'DCAR_019553' => 'dca', 'DCAR_020952' => 'dca', 'DCAR_021739' => 'dca', 'DCAR_027407' => 'dca', 'DCAR_027913' => 'dca', 'DCAR_028066' => 'dca', 'Dinv05899' => 'din', 'Dinv07563' => 'din', 'Dinv08010' => 'din', 'Dinv14125' => 'din', 'Dinv20172' => 'din', 'Dinv30743' => 'din', 'Dinv31229' => 'din', 'Dinv34162' => 'din', 'Dinv36028' => 'din', 'Dinv39368' => 'din', 'Dinv40565' => 'din', 'Dinv41706' => 'din', 'Duzib052G0089' => 'dzi', 'Duzib116G0641' => 'dzi', 'Duzib132G0069' => 'dzi', 'Duzib132G1219' => 'dzi', 'Duzib147G0278' => 'dzi', 'Duzib160G0480' => 'dzi', 'Duzib170G0661' => 'dzi', 'Duzib177G0591' => 'dzi', 'Duzib187G1353' => 'dzi', 'Duzib192G0858' => 'dzi', 'Duzib192G0883' => 'dzi', 'Duzib213G0506' => 'dzi', 'Duzib235G0289' => 'dzi', 'Duzib251G0422' => 'dzi', 'ECA232G3898' => 'eca', 'ECA233G5950' => 'eca', 'ECA234G1699' => 'eca', 'ECA234G2421' => 'eca', 'ECA236G0426' => 'eca', 'ECA236G4331' => 'eca', 'ECA248G2573' => 'eca', 'EL10Ac1g00077' => 'bvu', 'EL10Ac1g01746' => 'bvu', 'EL10Ac2g03464' => 'bvu', 'EL10Ac4g08176' => 'bvu', 'EL10Ac7g17521' => 'bvu', 'EL10Ac8g20386' => 'bvu', 'EL10Ac9g21343' => 'bvu', 'EL10Ac9g22688' => 'bvu', 'Eucgr.B03434' => 'egr', 'Eucgr.D00618' => 'egr', 'Eucgr.E02395' => 'egr', 'Eucgr.F01129' => 'egr', 'Eucgr.F02622' => 'egr', 'Eucgr.F04207' => 'egr', 'FAN01G0570' => 'fan', 'FAN03G3351' => 'fan', 'FAN06G3702' => 'fan', 'FAN07G2149' => 'fan', 'FAN10G3758' => 'fan', 'FAN11G1170' => 'fan', 'FAN11G2050' => 'fan', 'FAN11G2724' => 'fan', 'FAN12G1700' => 'fan', 'FAN12G2028' => 'fan', 'FAN15G1160' => 'fan', 'FAN15G3063' => 'fan', 'FAN16G2540' => 'fan', 'FAN16G3077' => 'fan', 'FAN16G3624' => 'fan', 'FAN17G0221' => 'fan', 'FAN20G2492' => 'fan', 'FAN20G2905' => 'fan', 'FAN21G0548' => 'fan', 'FAN21G1300' => 'fan', 'FAN22G0077' => 'fan', 'FAN22G1315' => 'fan', 'FAN24G1280' => 'fan', 'FAN24G1445' => 'fan', 'FAN24G3527' => 'fan', 'FAN25G0464' => 'fan', 'FAN25G2885' => 'fan', 'FAN25G3270' => 'fan', 'FAN27G1101' => 'fan', 'FAN27G2846' => 'fan', 'FAN27G3524' => 'fan', 'FvH4_2g11770' => 'fve', 'FvH4_2g15630' => 'fve', 'FvH4_3g05570' => 'fve', 'FvH4_3g09110' => 'fve', 'FvH4_3g19940' => 'fve', 'FvH4_4g04821' => 'fve', 'FvH4_4g31480' => 'fve', 'FvH4_7g01740' => 'fve', 'Glyma.05G130400' => 'gma', 'Glyma.05G156400' => 'gma', 'Glyma.07G197000' => 'gma', 'Glyma.08G085151' => 'gma', 'Glyma.08G114500' => 'gma', 'Glyma.08G300400' => 'gma', 'Glyma.10G215800' => 'gma', 'Glyma.12G224400' => 'gma', 'Glyma.13G179300' => 'gma', 'Glyma.13G218151' => 'gma', 'Glyma.13G238800' => 'gma', 'Glyma.13G276900' => 'gma', 'Glyma.14G078200' => 'gma', 'Glyma.15G074500' => 'gma', 'Glyma.15G094100' => 'gma', 'Glyma.17G247200' => 'gma', 'Glyma.18G120100' => 'gma', 'Glyma.20G176000' => 'gma', 'Gohir.A01G063600' => 'ghi', 'Gohir.A01G170301' => 'ghi', 'Gohir.A02G060500' => 'ghi', 'Gohir.A05G133850' => 'ghi', 'Gohir.A05G161400' => 'ghi', 'Gohir.A06G012900' => 'ghi', 'Gohir.A06G035901' => 'ghi', 'Gohir.A06G127100' => 'ghi', 'Gohir.A06G210500' => 'ghi', 'Gohir.A08G008650' => 'ghi', 'Gohir.A09G072700' => 'ghi', 'Gohir.A09G088301' => 'ghi', 'Gohir.A10G040600' => 'ghi', 'Gohir.A12G036300' => 'ghi', 'Gohir.A12G143350' => 'ghi', 'Gohir.A12G165500' => 'ghi', 'Gohir.A13G145700' => 'ghi', 'Gohir.D01G050000' => 'ghi', 'Gohir.D01G051366' => 'ghi', 'Gohir.D01G161350' => 'ghi', 'Gohir.D02G065900' => 'ghi', 'Gohir.D05G164200' => 'ghi', 'Gohir.D05G355500' => 'ghi', 'Gohir.D06G010400' => 'ghi', 'Gohir.D06G111250' => 'ghi', 'Gohir.D06G132000' => 'ghi', 'Gohir.D06G210500' => 'ghi', 'Gohir.D07G165675' => 'ghi', 'Gohir.D08G062240' => 'ghi', 'Gohir.D08G086101' => 'ghi', 'Gohir.D08G138060' => 'ghi', 'Gohir.D09G072300' => 'ghi', 'Gohir.D10G041400' => 'ghi', 'Gohir.D11G191020' => 'ghi', 'Gohir.D11G212066' => 'ghi', 'Gohir.D12G036300' => 'ghi', 'Gohir.D12G168600' => 'ghi', 'Gohir.D13G150600' => 'ghi', 'Gorai.001G057300' => 'gra', 'Gorai.002G069900' => 'gra', 'Gorai.002G200000' => 'gra', 'Gorai.003G067600' => 'gra', 'Gorai.005G074800' => 'gra', 'Gorai.006G087300' => 'gra', 'Gorai.008G037500' => 'gra', 'Gorai.008G181400' => 'gra', 'Gorai.009G169400' => 'gra', 'Gorai.009G387900' => 'gra', 'Gorai.010G013300' => 'gra', 'Gorai.010G153800' => 'gra', 'Gorai.010G255800' => 'gra', 'Gorai.011G043700' => 'gra', 'Gorai.011G198900' => 'gra', 'Gorai.013G168400' => 'gra', 'GSVIVG01005212001' => 'vvi', 'GSVIVG01006163001' => 'vvi', 'GSVIVG01009625001' => 'vvi', 'GSVIVG01014338001' => 'vvi', 'GSVIVG01020005001' => 'vvi', 'GSVIVG01021450001' => 'vvi', 'GSVIVG01023975001' => 'vvi', 'GSVIVG01034490001' => 'vvi', 'HanXRQChr04g0112071' => 'han', 'HanXRQChr05g0131151' => 'han', 'HanXRQChr09g0262371' => 'han', 'HanXRQChr09g0268401' => 'han', 'HanXRQChr10g0279241' => 'han', 'HanXRQChr10g0297961' => 'han', 'HanXRQChr11g0326231' => 'han', 'HanXRQChr11g0328471' => 'han', 'HanXRQChr16g0507941' => 'han', 'HanXRQChr17g0560211' => 'han', 'Haze_02108' => 'cav', 'Haze_02428' => 'cav', 'Haze_05593' => 'cav', 'Haze_06448' => 'cav', 'Haze_09427' => 'cav', 'Haze_12022' => 'cav', 'Haze_17612' => 'cav', 'Haze_17928' => 'cav', 'Hma1.2p1_0032F.1_g019250' => 'hma', 'Hma1.2p1_0163F.1_g072690' => 'hma', 'Hma1.2p1_0265F.1_g106710' => 'hma', 'Hma1.2p1_0286F.1_g113970' => 'hma', 'Hma1.2p1_0363F.1_g136640' => 'hma', 'Hma1.2p1_0584F.1_g183470' => 'hma', 'Hma1.2p1_0885F.1_g232570' => 'hma', 'HPP92_006022' => 'vpl', 'HPP92_007320' => 'vpl', 'HPP92_011521' => 'vpl', 'HPP92_019387' => 'vpl', 'HPP92_024038' => 'vpl', 'Hund05891' => 'sun', 'Hund06450' => 'sun', 'Hund12053' => 'sun', 'Hund16800' => 'sun', 'Hund21222' => 'sun', 'Hund22896' => 'sun', 'Hund23746' => 'sun', 'Hund27083' => 'sun', 'Lalb_Chr02g0141831' => 'lal', 'Lalb_Chr02g0141841' => 'lal', 'Lalb_Chr05g0220411' => 'lal', 'Lalb_Chr06g0162081' => 'lal', 'Lalb_Chr09g0327651' => 'lal', 'Lalb_Chr13g0295051' => 'lal', 'Lalb_Chr15g0086801' => 'lal', 'Lalb_Chr16g0383781' => 'lal', 'Lalb_Chr16g0383791' => 'lal', 'Lalb_Chr18g0055441' => 'lal', 'Lalb_Chr18g0059611' => 'lal', 'Lalb_Chr20g0109661' => 'lal', 'Lalb_Chr20g0109831' => 'lal', 'Lalb_Chr20g0121871' => 'lal', 'Lalb_Chr22g0355361' => 'lal', 'Lalb_Chr25g0286371' => 'lal', 'Lj1A1187G43' => 'lonja', 'Lj1A1205T50' => 'lonja', 'Lj1A800G33' => 'lonja', 'Lj1C1187T7' => 'lonja', 'Lj1C843T11' => 'lonja', 'Lj1g0010940' => 'lja', 'Lj2A288T69' => 'lonja', 'Lj3g0024276' => 'lja', 'Lj4A47T76' => 'lonja', 'Lj4g0005805' => 'lja', 'Lj4g0006097' => 'lja', 'Lj4g0008528' => 'lja', 'Lj4g0024907' => 'lja', 'Lj5g0012472' => 'lja', 'Lj5g0018648' => 'lja', 'Lj6C789G1' => 'lonja', 'Lj6g0004000' => 'lja', 'Lj7A292G67' => 'lonja', 'Lj7A292T64' => 'lonja', 'Lj9A400T58' => 'lonja', 'Lsat_1_v5_gn_1_126181' => 'lsa', 'Lsat_1_v5_gn_4_123041' => 'lsa', 'Lsat_1_v5_gn_4_133620' => 'lsa', 'Lsat_1_v5_gn_4_53221' => 'lsa', 'Lsat_1_v5_gn_4_71961' => 'lsa', 'Lsat_1_v5_gn_7_105241' => 'lsa', 'Lsat_1_v5_gn_7_21361' => 'lsa', 'Lsat_1_v5_gn_7_28860' => 'lsa', 'Lsat_1_v5_gn_7_31260' => 'lsa', 'Lsat_1_v5_gn_8_52801' => 'lsa', 'Manes.02G191400' => 'mes', 'Manes.03G110100' => 'mes', 'Manes.04G071100' => 'mes', 'Manes.05G100500' => 'mes', 'Manes.05G164700' => 'mes', 'Manes.15G087000' => 'mes', 'Manes.15G121500' => 'mes', 'Manes.16G028300' => 'mes', 'Manes.17G046100' => 'mes', 'Manes.17G069800' => 'mes', 'Manes.18G100500' => 'mes', 'Mapoly0002s0109' => 'mpo', 'Mapoly0024s0007' => 'mpo', 'Mapoly0089s0032' => 'mpo', 'MBI04_g42241_MAGBIO' => 'mbi', 'MBI05_g11988_MAGBIO' => 'mbi', 'MBI05_g35452_MAGBIO' => 'mbi', 'MBI07_g30179_MAGBIO' => 'mbi', 'MBI07_g35859_MAGBIO' => 'mbi', 'MBI07_g35860_MAGBIO' => 'mbi', 'MBI07_g37166_MAGBIO' => 'mbi', 'MBI08_g18172_MAGBIO' => 'mbi', 'MBI09_g08441_MAGBIO' => 'mbi', 'MBI13_g01676_MAGBIO' => 'mbi', 'MBI14_g42955_MAGBIO' => 'mbi', 'MBI16_g13161_MAGBIO' => 'mbi', 'MBI17_g27204_MAGBIO' => 'mbi', 'MBI19_g21595_MAGBIO' => 'mbi', 'MD00G1148400' => 'mdo', 'MD02G1301200' => 'mdo', 'MD03G1227800' => 'mdo', 'MD05G1041100' => 'mdo', 'MD05G1124800' => 'mdo', 'MD05G1284000' => 'mdo', 'MD05G1338800' => 'mdo', 'MD05G1338900' => 'mdo', 'MD07G1022800' => 'mdo', 'MD10G1047500' => 'mdo', 'MD10G1127500' => 'mdo', 'MD10G1262300' => 'mdo', 'MD10G1293800' => 'mdo', 'MD16G1074300' => 'mdo', 'Medtr1g021670' => 'mtr', 'Medtr1g096320' => 'mtr', 'Medtr2g013690' => 'mtr', 'Medtr2g019450' => 'mtr', 'Medtr2g085170' => 'mtr', 'Medtr4g088785' => 'mtr', 'Medtr8g055930' => 'mtr', 'Medtr8g085850' => 'mtr', 'MELO3C002605.2' => 'cme', 'MELO3C003891.2' => 'cme', 'MELO3C004012.2' => 'cme', 'MELO3C007134.2' => 'cme', 'MELO3C008118.2' => 'cme', 'MELO3C016700.2' => 'cme', 'MELO3C024127.2' => 'cme', 'MELO3C033361.2' => 'cme', 'MELO3C033362.2' => 'cme', 'Migut.C00430' => 'egut', 'Migut.C01246' => 'egut', 'Migut.E00101' => 'egut', 'Migut.H01486' => 'egut', 'Migut.H01939' => 'egut', 'Migut.K00360' => 'egut', 'Migut.M00910' => 'egut', 'Migut.M01139' => 'egut', 'Migut.N02677' => 'egut', 'MSTRG.13252' => 'ama', 'MSTRG.14701' => 'ama', 'MSTRG.1521' => 'ama', 'MSTRG.15884' => 'ama', 'MSTRG.16242' => 'ama', 'MSTRG.22285' => 'ama', 'MSTRG.22444' => 'ama', 'MSTRG.2349' => 'ama', 'MSTRG.26308' => 'ama', 'MSTRG.28296' => 'ama', 'MSTRG.9895' => 'ama', 'Nitab4.5_0000110g0060' => 'nta', 'Nitab4.5_0000420g0130' => 'nta', 'Nitab4.5_0000422g0030' => 'nta', 'Nitab4.5_0000560g0180' => 'nta', 'Nitab4.5_0000703g0100' => 'nta', 'Nitab4.5_0000786g0200' => 'nta', 'Nitab4.5_0001336g0020' => 'nta', 'Nitab4.5_0001796g0030' => 'nta', 'Nitab4.5_0003348g0060' => 'nta', 'Nitab4.5_0003698g0040' => 'nta', 'Nitab4.5_0003942g0090' => 'nta', 'Nitab4.5_0004775g0070' => 'nta', 'Nitab4.5_0004864g0030' => 'nta', 'Nitab4.5_0005615g0020' => 'nta', 'Nitab4.5_0009288g0030' => 'nta', 'Nitab4.5_0009341g0010' => 'nta', 'Nitab4.5_0009535g0010' => 'nta', 'Nn1g03995' => 'nnu', 'Nn1g04100' => 'nnu', 'Nn1g06530' => 'nnu', 'Nn3g16404' => 'nnu', 'Nn3g17212' => 'nnu', 'Nn3g20776' => 'nnu', 'Nn3g21923' => 'nnu', 'Nn5g27737' => 'nnu', 'Nn5g29461' => 'nnu', 'Nn7g38355' => 'nnu', 'Nn8g39873' => 'nnu', 'Oeu000548.2' => 'oeu', 'Oeu004672.1' => 'oeu', 'Oeu015605.2' => 'oeu', 'Oeu016092.1' => 'oeu', 'Oeu017879.3' => 'oeu', 'Oeu024910.1' => 'oeu', 'Oeu028965.1' => 'oeu', 'Oeu031269.1' => 'oeu', 'Oeu031270.1' => 'oeu', 'Oeu032535.1' => 'oeu', 'Oeu034151.1' => 'oeu', 'Oeu034152.1' => 'oeu', 'Oeu034588.2' => 'oeu', 'Oeu050846.1' => 'oeu', 'Oeu050849.2' => 'oeu', 'Oeu051063.2' => 'oeu', 'Oeu052368.1' => 'oeu', 'Oeu052370.1' => 'oeu', 'Os01g0210400' => 'osa', 'Os01g0304300' => 'osa', 'Os01g0749100' => 'osa', 'Os02g0745800' => 'osa', 'Os03g0769050' => 'osa', 'Os05g0531500' => 'osa', 'Os06g0724300' => 'osa', 'Os11g0198100' => 'osa', 'Peaxi162Scf00069g01425' => 'pax', 'Peaxi162Scf00280g00811' => 'pax', 'Peaxi162Scf00310g00615' => 'pax', 'Peaxi162Scf00362g00542' => 'pax', 'Peaxi162Scf00461g00310' => 'pax', 'Peaxi162Scf00530g00118' => 'pax', 'Peaxi162Scf00541g00057' => 'pax', 'Peaxi162Scf00661g00017' => 'pax', 'Peaxi162Scf00926g00027' => 'pax', 'Peaxi162Scf01064g00263' => 'pax', 'Peaxi162Scf01211g00135' => 'pax', 'PGR004G2336' => 'pgr', 'PGR042G0327' => 'pgr', 'PGR042G1957' => 'pgr', 'PGR042G2003' => 'pgr', 'PGR042G3929' => 'pgr', 'PGR083G1137' => 'pgr', 'PGR083G1364' => 'pgr', 'PGSC0003DMG400003381' => 'stu', 'PGSC0003DMG400003417' => 'stu', 'PGSC0003DMG400008981' => 'stu', 'PGSC0003DMG400012417' => 'stu', 'PGSC0003DMG400012823' => 'stu', 'PGSC0003DMG400016885' => 'stu', 'PGSC0003DMG400022812' => 'stu', 'PGSC0003DMG400029726' => 'stu', 'PGSC0003DMG401009243' => 'stu', 'PGSC0003DMG401031505' => 'stu', 'PGSC0003DMG402031505' => 'stu', 'Phvul.001G017600' => 'pvu', 'Phvul.002G193500' => 'pvu', 'Phvul.002G228900' => 'pvu', 'Phvul.002G236800' => 'pvu', 'Phvul.003G049500' => 'pvu', 'Phvul.005G072000' => 'pvu', 'Phvul.006G164800' => 'pvu', 'Phvul.006G185100' => 'pvu', 'Phvul.007G090000' => 'pvu', 'Potri.001G399800' => 'ptr', 'Potri.002G149900' => 'ptr', 'Potri.004G044100' => 'ptr', 'Potri.004G177600' => 'ptr', 'Potri.009G138000' => 'ptr', 'Potri.010G094000' => 'ptr', 'Potri.011G053000' => 'ptr', 'Potri.011G119300' => 'ptr', 'Potri.013G113700' => 'ptr', 'Potri.018G107800' => 'ptr', 'Potri.019G084100' => 'ptr', 'Pp3c14_23720' => 'ppa', 'Pp3c16_6340' => 'ppa', 'Pp3c23_13420' => 'ppa', 'Pp3c24_2740' => 'ppa', 'Pp3c25_860' => 'ppa', 'Pp3c8_21750' => 'ppa', 'Prupe.1G273000' => 'ppe', 'Prupe.1G273700' => 'ppe', 'Prupe.1G274100' => 'ppe', 'Prupe.2G023300' => 'ppe', 'Prupe.4G048000' => 'ppe', 'Prupe.4G080400' => 'ppe', 'Prupe.4G181200' => 'ppe', 'Prupe.8G056900' => 'ppe', 'Prupe.8G168700' => 'ppe', 'Psat1g189080' => 'psa', 'Psat1g204760' => 'psa', 'Psat4g175560' => 'psa', 'Psat4g177720' => 'psa', 'Psat5g244240' => 'psa', 'Psat6g010720' => 'psa', 'Psat6g187200' => 'psa', 'Psat7g072040' => 'psa', 'PSO017G3501' => 'pso', 'PSO063G2148' => 'pso', 'PSO063G5608' => 'pso', 'PSO210G6392' => 'pso', 'PSO541G2319' => 'pso', 'PSO541G2836' => 'pso', 'PSO541G4012' => 'pso', 'PSO541G6253' => 'pso', 'PSO675G0580' => 'pso', 'PSO675G0856' => 'pso', 'PSO675G5635' => 'pso', 'PSO675G9157' => 'pso', 'PSO832G1660' => 'pso', 'PSO832G1969' => 'pso', 'QL02p007186' => 'qlo', 'QL02p033904' => 'qlo', 'QL03p064391' => 'qlo', 'QL05p040593' => 'qlo', 'QL05p058242' => 'qlo', 'QL08p021825' => 'qlo', 'QL11p004981' => 'qlo', 'RcHm_v2.0_Chr1g0318301' => 'rch', 'RcHm_v2.0_Chr4g0418501' => 'rch', 'RcHm_v2.0_Chr4g0439971' => 'rch', 'RcHm_v2.0_Chr5g0008541' => 'rch', 'RcHm_v2.0_Chr5g0014101' => 'rch', 'RcHm_v2.0_Chr5g0014131' => 'rch', 'RcHm_v2.0_Chr5g0033621' => 'rch', 'RcHm_v2.0_Chr6g0272041' => 'rch', 'RcHm_v2.0_Chr6g0278831' => 'rch', 'Rhsim02G0130400' => 'rsi', 'Rhsim02G0171100' => 'rsi', 'Rhsim05G0053000' => 'rsi', 'Rhsim05G0053100' => 'rsi', 'Rhsim06G0096500' => 'rsi', 'Rhsim06G0096600' => 'rsi', 'Rhsim06G0199100' => 'rsi', 'Rhsim12G0062300' => 'rsi', 'Rhsim12G0062800' => 'rsi', 'Sabra02G0118600' => 'sbr', 'Sabra04G0027300' => 'sbr', 'Sabra04G0119500' => 'sbr', 'Sabra08G0112500' => 'sbr', 'Sabra11G0036800' => 'sbr', 'Sabra11G0103800' => 'sbr', 'Sabra13G0096300' => 'sbr', 'Sabra16G0262300' => 'sbr', 'Sabra18G0091700' => 'sbr', 'Sabra19G0095400' => 'sbr', 'SalBow6G3080' => 'sbo', 'SalBow7G1157' => 'sbo', 'SalBow7G2123' => 'sbo', 'SalBow7G2285' => 'sbo', 'SalBow7G3537' => 'sbo', 'SalBow8G2947' => 'sbo', 'SalBow8G4463' => 'sbo', 'SalBow8G5466' => 'sbo', 'Sc01g0001750' => 'sci', 'Sc02g0006640' => 'sci', 'Sc02g0006670' => 'sci', 'Sc04g0008220' => 'sci', 'Sc05g0006190' => 'sci', 'Sc08g0002760' => 'sci', 'Sc17g0006170' => 'sci', 'Sc22g0002050' => 'sci', 'Sc23g0001190' => 'sci', 'Sc24g0000980' => 'sci', 'Sed0006245' => 'sed', 'Sed0007543' => 'sed', 'Sed0009411' => 'sed', 'Sed0010765' => 'sed', 'Sed0012944' => 'sed', 'Sed0014682' => 'sed', 'Sed0016174' => 'sed', 'Sed0016796' => 'sed', 'Sed0020317' => 'sed', 'Sed0021467' => 'sed', 'SEGI_01316' => 'sgi', 'SEGI_03374' => 'sgi', 'SEGI_16265' => 'sgi', 'SEGI_18569' => 'sgi', 'SEGI_20351' => 'sgi', 'SEGI_26395' => 'sgi', 'SEGI_29469' => 'sgi', 'SEGI_34771' => 'sgi', 'SEGI_36769' => 'sgi', 'SEGI_37139' => 'sgi', 'SGA_v2.0_scaffold100G29687' => 'sas', 'SGA_v2.0_scaffold118G32472' => 'sas', 'SGA_v2.0_scaffold14G07051' => 'sas', 'SGA_v2.0_scaffold183G39845' => 'sas', 'SGA_v2.0_scaffold1G00174' => 'sas', 'SGA_v2.0_scaffold22G09714' => 'sas', 'SGA_v2.0_scaffold333G48992' => 'sas', 'SGA_v2.0_scaffold46G17491' => 'sas', 'SGA_v2.0_scaffold49G18294' => 'sas', 'SGA_v2.0_scaffold63G21658' => 'sas', 'SHI01741' => 'shi', 'SHI05771' => 'shi', 'SHI18077' => 'shi', 'SHI20525' => 'shi', 'SHI20527' => 'shi', 'SHI20528' => 'shi', 'SMO172G0185' => 'smo', 'SMO198G0020' => 'smo', 'SMO351G0006' => 'smo', 'SMO356G0118' => 'smo', 'SMO358G0296' => 'smo', 'SMO367G0079' => 'smo', 'SMO367G1277' => 'smo', 'Solyc01g014220.3' => 'sly', 'Solyc01g111770.2' => 'sly', 'Solyc02g078180.3' => 'sly', 'Solyc03g006430.3' => 'sly', 'Solyc03g006456.1' => 'sly', 'Solyc03g079860.2' => 'sly', 'Solyc04g079770.3' => 'sly', 'Solyc05g007430.4' => 'sly', 'Solyc07g063150.3' => 'sly', 'Solyc08g016620.3' => 'sly', 'Solyc09g057590.3' => 'sly', 'Solyc09g057600.1' => 'sly', 'Solyc10g009050.3' => 'sly', 'Solyc11g017420.2' => 'sly', 'Sopen01g053810' => 'spe', 'Sopen02g023040' => 'spe', 'Sopen03g002440' => 'spe', 'Sopen04g033350' => 'spe', 'Sopen05g003310' => 'spe', 'Sopen07g004050' => 'spe', 'Sopen07g031340' => 'spe', 'Sopen08g006990' => 'spe', 'Sopen10g004830' => 'spe', 'Sopen11g009370' => 'spe', 'Sp1g24450' => 'spa', 'Sp1g29670' => 'spa', 'Sp1g39600' => 'spa', 'Sp2g11080' => 'spa', 'Sp2g13970' => 'spa', 'Sp4g16130' => 'spa', 'Sp6g13080' => 'spa', 'Sp7g37270' => 'spa', 'TAR371G0065' => 'tar', 'TAR376G0340' => 'tar', 'TAR376G0435' => 'tar', 'TAR381G0002' => 'tar', 'TAR381G1236' => 'tar', 'TAR624G0055' => 'tar', 'TAR624G0324' => 'tar', 'TAR624G0696' => 'tar', 'TAR624G0906' => 'tar', 'TAR625G0107' => 'tar', 'TAR626G0015' => 'tar', 'TAR626G1356' => 'tar', 'TAR627G0888' => 'tar', 'TAR628G0399' => 'tar', 'TAR628G1327' => 'tar', 'TAR629G2831' => 'tar', 'TAR629G2874' => 'tar', 'TAR633G1432' => 'tar', 'TAR633G2771' => 'tar', 'THA.LOC104803394' => 'tha', 'THA.LOC104805153' => 'tha', 'THA.LOC104806784' => 'tha', 'THA.LOC104810473' => 'tha', 'THA.LOC104813100' => 'tha', 'THA.LOC104814215' => 'tha', 'THA.LOC104815554' => 'tha', 'THA.LOC104820544' => 'tha', 'THA.LOC104824754' => 'tha', 'THA.LOC104827717' => 'tha', 'Thecc.02G031400' => 'tca', 'Thecc.02G055900' => 'tca', 'Thecc.02G350800' => 'tca', 'Thecc.06G150900' => 'tca', 'Thecc.06G186600' => 'tca', 'Thecc.07G089600' => 'tca', 'Thecc.08G020400' => 'tca', 'Thecc.08G182100' => 'tca', 'Thhalv10000873m.g' => 'esa', 'Thhalv10004185m.g' => 'esa', 'Thhalv10006981m.g' => 'esa', 'Thhalv10007204m.g' => 'esa', 'Thhalv10011374m.g' => 'esa', 'Thhalv10013482m.g' => 'esa', 'Thhalv10017801m.g' => 'esa', 'Thhalv10024983m.g' => 'esa', 'TPR.G12072' => 'tpr', 'TPR.G15769' => 'tpr', 'TPR.G16504' => 'tpr', 'TPR.G16506' => 'tpr', 'TPR.G24345' => 'tpr', 'TPR.G26666' => 'tpr', 'TPR.G27320' => 'tpr', 'TPR.G31819' => 'tpr', 'TPR.G38879' => 'tpr', 'TPR.G39015' => 'tpr', 'TPR.G8819' => 'tpr', 'TWI09G0924' => 'twi', 'TWI12G0811' => 'twi', 'TWI12G1294' => 'twi', 'TWI31G0150' => 'twi', 'TWI36G1262' => 'twi', 'TWI38G1287' => 'twi', 'TWI38G1633' => 'twi', 'TWI38G1982' => 'twi', 'TWI39G0116' => 'twi', 'TWI60G1011' => 'twi', 'TWI63G0171' => 'twi', 'TWI73G0839' => 'twi', 'TWI79G1511' => 'twi', 'unitig_0.g915' => 'ugi', 'unitig_0.g916' => 'ugi', 'unitig_21.g20219' => 'ugi', 'unitig_21.g20416' => 'ugi', 'unitig_578.g16132' => 'ugi', 'unitig_578.g16718' => 'ugi', 'unitig_62.g23481' => 'ugi', 'unitig_744.g24535' => 'ugi', 'unitig_749.g13525' => 'ugi', 'vmacro01248' => 'vma', 'vmacro02290' => 'vma', 'vmacro10946' => 'vma', 'vmacro11865' => 'vma', 'vmacro12493' => 'vma', 'vmacro17322' => 'vma', 'vmacro21599' => 'vma', 'vmacro23041' => 'vma', 'VMungo0251G0004' => 'vmu', 'VMungo0251G2639' => 'vmu', 'VMungo0251G2967' => 'vmu', 'VMungo0540G0864' => 'vmu', 'VMungo0540G1569' => 'vmu', 'VMungo0647G0317' => 'vmu', 'VMungo0720G1373' => 'vmu', 'VMungo0720G1508' => 'vmu', 'VMungo1080G0485' => 'vmu', 'VMungo1215G3177' => 'vmu', 'Zm00001eb112600' => 'zma', 'Zm00001eb120220' => 'zma', 'Zm00001eb153240' => 'zma', 'Zm00001eb168880' => 'zma', 'Zm00001eb213920' => 'zma', 'Zm00001eb228280' => 'zma', 'Zm00001eb254580' => 'zma', 'Zm00001eb272180' => 'zma', 'Zm00001eb293190' => 'zma', 'Zm00001eb322930' => 'zma', 'Zm00001eb353360' => 'zma', 'Zm00001eb353390' => 'zma', 'Zm00001eb353430' => 'zma', 'Zm00001eb353440' => 'zma', 'Zm00001eb353780' => 'zma' ) $gf_id = 'HOM05D000499' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000499' ) $data_identifier = 'HOM05D000499' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 29, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 12, 'amhyb' => (int) 8, 'aly' => (int) 12, 'aox' => (int) 9, 'arhy' => (int) 26, 'ath' => (int) 8, 'atr' => (int) 7, 'acertr' => (int) 10, 'cqu' => (int) 15, 'bca' => (int) 29, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 11, 'cansat' => (int) 8, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 9, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 8, 'cpa' => (int) 10, 'csa' => (int) 7, 'camsi' => (int) 20, 'dca' => (int) 8, 'din' => (int) 12, 'dzi' => (int) 14, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 6, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 38, 'gra' => (int) 16, 'vvi' => (int) 8, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 5, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 11, 'lja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 11, 'mpo' => (int) 3, 'mbi' => (int) 14, 'mdo' => (int) 14, 'mtr' => (int) 8, 'cme' => (int) 9, 'egut' => (int) 9, 'ama' => (int) 11, 'nta' => (int) 17, 'nnu' => (int) 11, 'oeu' => (int) 18, 'osa' => (int) 8, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 6, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 9, 'rsi' => (int) 9, 'sbr' => (int) 10, 'sbo' => (int) 8, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 10, 'sas' => (int) 10, 'shi' => (int) 6, 'smo' => (int) 7, 'sly' => (int) 14, 'spe' => (int) 10, 'spa' => (int) 8, 'tar' => (int) 19, 'tha' => (int) 10, 'tca' => (int) 8, 'esa' => (int) 8, 'tpr' => (int) 11, 'twi' => (int) 13, 'ugi' => (int) 9, 'vma' => (int) 8, 'vmu' => (int) 10, 'zma' => (int) 15 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb353780' $species_info = array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ) $local_species = 'din' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000499', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1066', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p29780' => 'bna', 'A02p33180' => 'bna', 'A03p16470' => 'bna', 'A03p66010' => 'bna', 'A04p25970' => 'bna', 'A06p01270' => 'bna', 'A06p46080' => 'bna', 'A07p11400' => 'bna', 'A08p01840' => 'bna', 'A08p08230' => 'bna', 'A08p25740' => 'bna', 'A09p32070' => 'bna', 'A09p37830' => 'bna', 'A09p42840' => 'bna', 'A09p42850' => 'bna', 'Aa31LG10G2060' => 'aar', 'Aa31LG2G7410' => 'aar', 'Aa31LG6G10200' => 'aar', 'Aa31LG6G16680' => 'aar', 'Aa31LG6G8470' => 'aar', 'Aa31LG9G12730' => 'aar', 'Aa31LG9G13680' => 'aar', 'Aa31LG9G14920' => 'aar', 'Aa31LG9G6650' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4977' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5467' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3254' => 'aag', 'Actinidia02578' => 'ach', 'Actinidia07693' => 'ach', 'Actinidia08413' => 'ach', 'Actinidia08414' => 'ach', 'Actinidia15289' => 'ach', 'Actinidia19871' => 'ach', 'Actinidia21475' => 'ach', 'Actinidia22576' => 'ach', 'Actinidia28327' => 'ach', 'Actinidia32491' => 'ach', 'Actinidia39463' => 'ach', 'Actinidia39571' => 'ach', 'Ah.01g013750' => 'amhyb', 'Ah.01g023210' => 'amhyb', 'Ah.04g164850' => 'amhyb', 'Ah.05g178060' => 'amhyb', 'Ah.07g204270' => 'amhyb', 'Ah.07g208480' => 'amhyb', 'Ah.09g237410' => 'amhyb', 'Ah.14g089460' => 'amhyb', 'AL1G41790' => 'aly', 'AL1G49050' => 'aly', 'AL1G53810' => 'aly', 'AL1G61400' => 'aly', 'AL4G18580' => 'aly', 'AL5G12510' => 'aly', 'AL5G12540' => 'aly', 'AL6G43230' => 'aly', 'AL7G10370' => 'aly', 'AL7G19250' => 'aly', 'AL8G12240' => 'aly', 'AL8G18540' => 'aly', 'Aqoxy1G02409' => 'aox', 'Aqoxy2G03993' => 'aox', 'Aqoxy3G03357' => 'aox', 'Aqoxy4G00785' => 'aox', 'Aqoxy5G02598' => 'aox', 'Aqoxy6G00132' => 'aox', 'Aqoxy7G01776' => 'aox', 'Aqoxy7G02316' => 'aox', 'Aqoxy7G03973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.12AFKW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B8730' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27IQR1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3F75VG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3RE0GA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41TCQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.527VTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FIR39' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5W8UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DA38EV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ63HS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H1I32C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HC27T5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4M8AP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7N3CZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9UVDZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LS1NQA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT1D4B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SKC4TM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCFV76' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF9Q1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQWD9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1ZM88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WE07RT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YCK7VH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJE6Q6' => 'arhy', 'AT1G28240' => 'ath', 'AT1G34550' => 'ath', 'AT1G53040' => 'ath', 'AT2G02910' => 'ath', 'AT4G09630' => 'ath', 'AT4G38500' => 'ath', 'AT5G42660' => 'ath', 'AT5G46220' => 'ath', 'ATR0152G026' => 'atr', 'ATR0564G343' => 'atr', 'ATR0706G151' => 'atr', 'ATR0733G207' => 'atr', 'ATR0751G234' => 'atr', 'ATR0807G048' => 'atr', 'ATR1091G084' => 'atr', 'Atru.chr10.1229' => 'acertr', 'Atru.chr10.1230' => 'acertr', 'Atru.chr10.1874' => 'acertr', 'Atru.chr11.1808' => 'acertr', 'Atru.chr13.1795' => 'acertr', 'Atru.chr13.570' => 'acertr', 'Atru.chr2.2608' => 'acertr', 'Atru.chr2.2609' => 'acertr', 'Atru.chr5.3428' => 'acertr', 'Atru.chr8.1171' => 'acertr', 'AUR62004651' => 'cqu', 'AUR62008675' => 'cqu', 'AUR62010014' => 'cqu', 'AUR62013004' => 'cqu', 'AUR62014825' => 'cqu', 'AUR62015015' => 'cqu', 'AUR62015151' => 'cqu', 'AUR62017020' => 'cqu', 'AUR62019422' => 'cqu', 'AUR62023570' => 'cqu', 'AUR62025571' => 'cqu', 'AUR62029098' => 'cqu', 'AUR62033863' => 'cqu', 'AUR62034296' => 'cqu', 'AUR62040075' => 'cqu', 'BcaB02g07334' => 'bca', 'BcaB02g10575' => 'bca', 'BcaB03g12119' => 'bca', 'BcaB03g12120' => 'bca', 'BcaB03g13945' => 'bca', 'BcaB04g17123' => 'bca', 'BcaB04g17867' => 'bca', 'BcaB04g19839' => 'bca', 'BcaB07g30317' => 'bca', 'BcaB07g32432' => 'bca', 'BcaB07g33362' => 'bca', 'BcaB08g36611' => 'bca', 'BcaC01g00028' => 'bca', 'BcaC01g01356' => 'bca', 'BcaC01g02034' => 'bca', 'BcaC01g06051' => 'bca', 'BcaC03g16839' => 'bca', 'BcaC03g17176' => 'bca', 'BcaC05g26829' => 'bca', 'BcaC06g31490' => 'bca', 'BcaC06g35344' => 'bca', 'BcaC06g36570' => 'bca', 'BcaC07g37537' => 'bca', 'BcaC08g43491' => 'bca', 'BcaC08g43773' => 'bca', 'BcaNung00234' => 'bca', 'BcaNung01982' => 'bca', 'BcaNung03707' => 'bca', 'BcaNung06454' => 'bca', 'BolC2t10762H' => 'bol', 'BolC2t11191H' => 'bol', 'BolC3t14322H' => 'bol', 'BolC3t19747H' => 'bol', 'BolC3t21425H' => 'bol', 'BolC4t27800H' => 'bol', 'BolC5t31423H' => 'bol', 'BolC6t35951H' => 'bol', 'BolC6t36282H' => 'bol', 'BolC7t40678H' => 'bol', 'BolC7t40679H' => 'bol', 'BolC7t42222H' => 'bol', 'BolC7t43492H' => 'bol', 'BolC7t46785H' => 'bol', 'BolC8t47853H' => 'bol', 'BolC9t56805H' => 'bol', 'BraA02t08000Z' => 'bra', 'BraA02t08341Z' => 'bra', 'BraA03t10936Z' => 'bra', 'BraA03t15657Z' => 'bra', 'BraA04t18100Z' => 'bra', 'BraA05t20523Z' => 'bra', 'BraA06t23353Z' => 'bra', 'BraA06t27473Z' => 'bra', 'BraA06t27769Z' => 'bra', 'BraA07t28928Z' => 'bra', 'BraA08t32236Z' => 'bra', 'BraA08t32841Z' => 'bra', 'BraA08t34524Z' => 'bra', 'BraA09t38742Z' => 'bra', 'BraA09t39295Z' => 'bra', 'C02p47180' => 'bna', 'C02p50990' => 'bna', 'C03p19360' => 'bna', 'C03p74950' => 'bna', 'C03p91000' => 'bna', 'C04p63260' => 'bna', 'C05p27050' => 'bna', 'C06p08750' => 'bna', 'C06p11490' => 'bna', 'C07p02820' => 'bna', 'C07p17180' => 'bna', 'C07p29440' => 'bna', 'C07p63730' => 'bna', 'C09p39260' => 'bna', 'CAN.G1164.34' => 'can', 'CAN.G1164.39' => 'can', 'CAN.G1530.3' => 'can', 'CAN.G162.61' => 'can', 'CAN.G176.6' => 'can', 'CAN.G289.49' => 'can', 'CAN.G370.21' => 'can', 'CAN.G370.22' => 'can', 'CAN.G371.117' => 'can', 'CAN.G58.37' => 'can', 'CAN.G588.98' => 'can', 'CANSAT21G2266' => 'cansat', 'CANSAT25G2799' => 'cansat', 'CANSAT35G0862' => 'cansat', 'CANSAT35G1704' => 'cansat', 'CANSAT35G1760' => 'cansat', 'CANSAT56G3971' => 'cansat', 'CANSAT56G4116' => 'cansat', 'CANSAT80G1259' => 'cansat', 'CARHR027730' => 'chi', 'CARHR033880' => 'chi', 'CARHR043270' => 'chi', 'CARHR145330' => 'chi', 'CARHR145340' => 'chi', 'CARHR175570' => 'chi', 'CARHR181570' => 'chi', 'CARHR258470' => 'chi', 'CARHR260490' => 'chi', 'CARHR294220' => 'chi', 'Carub.0001s2668' => 'cru', 'Carub.0001s3257' => 'cru', 'Carub.0001s4220' => 'cru', 'Carub.0005s0179' => 'cru', 'Carub.0006s2807' => 'cru', 'Carub.0007s0039' => 'cru', 'Carub.0008s0169' => 'cru', 'Carub.0008s0636' => 'cru', 'Ca_00338_v3' => 'car', 'Ca_00542_v3' => 'car', 'Ca_01844_v3' => 'car', 'Ca_10611_v3' => 'car', 'Ca_13326_v3' => 'car', 'Ca_17944_v3' => 'car', 'Ca_18546_v3' => 'car', 'Ca_24219_v3' => 'car', 'Ca_29972_v3' => 'car', 'CBR_g3681' => 'cbr', 'CBR_g40021' => 'cbr', 'Cc01_g08140' => 'ccan', 'Cc02_g13410' => 'ccan', 'Cc02_g37480' => 'ccan', 'Cc05_g12030' => 'ccan', 'Cc09_g03370' => 'ccan', 'Cc09_g10300' => 'ccan', 'Cc10_g03530' => 'ccan', 'Cc10_g11380' => 'ccan', 'CDE01G0176' => 'cde', 'CDE02G0675' => 'cde', 'CDE02G0942' => 'cde', 'CDE02G1153' => 'cde', 'CDE02G4177' => 'cde', 'CDE04G2117' => 'cde', 'CDE04G2736' => 'cde', 'CDE08G1161' => 'cde', 'CDE09G1238' => 'cde', 'Cfa000467' => 'cfa', 'Cfa000947' => 'cfa', 'Cfa004969' => 'cfa', 'Cfa005284' => 'cfa', 'Cfa008993' => 'cfa', 'Cfa018187' => 'cfa', 'Cfa018454' => 'cfa', 'Cfa020585' => 'cfa', 'Ciclev10000424m.g' => 'ccl', 'Ciclev10003605m.g' => 'ccl', 'Ciclev10007828m.g' => 'ccl', 'Ciclev10014620m.g' => 'ccl', 'Ciclev10015169m.g' => 'ccl', 'Ciclev10018291m.g' => 'ccl', 'Ciclev10028256m.g' => 'ccl', 'Ciclev10033822m.g' => 'ccl', 'CiPaw.05G060300' => 'cil', 'CiPaw.05G085000' => 'cil', 'CiPaw.06G083700' => 'cil', 'CiPaw.06G120300' => 'cil', 'CiPaw.09G060500' => 'cil', 'CiPaw.09G123800' => 'cil', 'CiPaw.11G169700' => 'cil', 'CiPaw.12G118300' => 'cil', 'CiPaw.15G071000' => 'cil', 'CiPaw.15G081900' => 'cil', 'ClCG01G024610' => 'cla', 'ClCG03G006070' => 'cla', 'ClCG05G019250' => 'cla', 'ClCG09G009500' => 'cla', 'ClCG11G008200' => 'cla', 'ClCG11G018080' => 'cla', 'COL.COLO4_17373' => 'col', 'COL.COLO4_22994' => 'col', 'COL.COLO4_26389' => 'col', 'COL.COLO4_27170' => 'col', 'COL.COLO4_31074' => 'col', 'COL.COLO4_31465' => 'col', 'COL.COLO4_36438' => 'col', 'COL.COLO4_36439' => 'col', 'Cpa.g.c38781' => 'cpa', 'Cpa.g.sc128.12' => 'cpa', 'Cpa.g.sc166.7' => 'cpa', 'Cpa.g.sc166.8' => 'cpa', 'Cpa.g.sc20.111' => 'cpa', 'Cpa.g.sc27.31' => 'cpa', 'Cpa.g.sc64.36' => 'cpa', 'Cpa.g.sc64.37' => 'cpa', 'Cpa.g.sc66.49' => 'cpa', 'Cpa.g.sc80.64' => 'cpa', 'CsaV3_1G012320' => 'csa', 'CsaV3_2G008480' => 'csa', 'CsaV3_2G033450' => 'csa', 'CsaV3_3G044830' => 'csa', 'CsaV3_4G033710' => 'csa', 'CsaV3_6G051730' => 'csa', 'CsaV3_7G025350' => 'csa', 'CSS0001067' => 'camsi', 'CSS0005996' => 'camsi', 'CSS0006590' => 'camsi', 'CSS0009673' => 'camsi', 'CSS0010201' => 'camsi', 'CSS0010549' => 'camsi', 'CSS0011364' => 'camsi', 'CSS0014473' => 'camsi', 'CSS0014961' => 'camsi', 'CSS0020191' => 'camsi', 'CSS0021165' => 'camsi', 'CSS0022306' => 'camsi', 'CSS0030591' => 'camsi', 'CSS0030696' => 'camsi', 'CSS0032653' => 'camsi', 'CSS0037487' => 'camsi', 'CSS0041102' => 'camsi', 'CSS0041261' => 'camsi', 'CSS0046246' => 'camsi', 'CSS0049256' => 'camsi', 'DCAR_004075' => 'dca', 'DCAR_011538' => 'dca', 'DCAR_019553' => 'dca', 'DCAR_020952' => 'dca', 'DCAR_021739' => 'dca', 'DCAR_027407' => 'dca', 'DCAR_027913' => 'dca', 'DCAR_028066' => 'dca', 'Dinv05899' => 'din', 'Dinv07563' => 'din', 'Dinv08010' => 'din', 'Dinv14125' => 'din', 'Dinv20172' => 'din', 'Dinv30743' => 'din', 'Dinv31229' => 'din', 'Dinv34162' => 'din', 'Dinv36028' => 'din', 'Dinv39368' => 'din', 'Dinv40565' => 'din', 'Dinv41706' => 'din', 'Duzib052G0089' => 'dzi', 'Duzib116G0641' => 'dzi', 'Duzib132G0069' => 'dzi', 'Duzib132G1219' => 'dzi', 'Duzib147G0278' => 'dzi', 'Duzib160G0480' => 'dzi', 'Duzib170G0661' => 'dzi', 'Duzib177G0591' => 'dzi', 'Duzib187G1353' => 'dzi', 'Duzib192G0858' => 'dzi', 'Duzib192G0883' => 'dzi', 'Duzib213G0506' => 'dzi', 'Duzib235G0289' => 'dzi', 'Duzib251G0422' => 'dzi', 'ECA232G3898' => 'eca', 'ECA233G5950' => 'eca', 'ECA234G1699' => 'eca', 'ECA234G2421' => 'eca', 'ECA236G0426' => 'eca', 'ECA236G4331' => 'eca', 'ECA248G2573' => 'eca', 'EL10Ac1g00077' => 'bvu', 'EL10Ac1g01746' => 'bvu', 'EL10Ac2g03464' => 'bvu', 'EL10Ac4g08176' => 'bvu', 'EL10Ac7g17521' => 'bvu', 'EL10Ac8g20386' => 'bvu', 'EL10Ac9g21343' => 'bvu', 'EL10Ac9g22688' => 'bvu', 'Eucgr.B03434' => 'egr', 'Eucgr.D00618' => 'egr', 'Eucgr.E02395' => 'egr', 'Eucgr.F01129' => 'egr', 'Eucgr.F02622' => 'egr', 'Eucgr.F04207' => 'egr', 'FAN01G0570' => 'fan', 'FAN03G3351' => 'fan', 'FAN06G3702' => 'fan', 'FAN07G2149' => 'fan', 'FAN10G3758' => 'fan', 'FAN11G1170' => 'fan', 'FAN11G2050' => 'fan', 'FAN11G2724' => 'fan', 'FAN12G1700' => 'fan', 'FAN12G2028' => 'fan', 'FAN15G1160' => 'fan', 'FAN15G3063' => 'fan', 'FAN16G2540' => 'fan', 'FAN16G3077' => 'fan', 'FAN16G3624' => 'fan', 'FAN17G0221' => 'fan', 'FAN20G2492' => 'fan', 'FAN20G2905' => 'fan', 'FAN21G0548' => 'fan', 'FAN21G1300' => 'fan', 'FAN22G0077' => 'fan', 'FAN22G1315' => 'fan', 'FAN24G1280' => 'fan', 'FAN24G1445' => 'fan', 'FAN24G3527' => 'fan', 'FAN25G0464' => 'fan', 'FAN25G2885' => 'fan', 'FAN25G3270' => 'fan', 'FAN27G1101' => 'fan', 'FAN27G2846' => 'fan', 'FAN27G3524' => 'fan', 'FvH4_2g11770' => 'fve', 'FvH4_2g15630' => 'fve', 'FvH4_3g05570' => 'fve', 'FvH4_3g09110' => 'fve', 'FvH4_3g19940' => 'fve', 'FvH4_4g04821' => 'fve', 'FvH4_4g31480' => 'fve', 'FvH4_7g01740' => 'fve', 'Glyma.05G130400' => 'gma', 'Glyma.05G156400' => 'gma', 'Glyma.07G197000' => 'gma', 'Glyma.08G085151' => 'gma', 'Glyma.08G114500' => 'gma', 'Glyma.08G300400' => 'gma', 'Glyma.10G215800' => 'gma', 'Glyma.12G224400' => 'gma', 'Glyma.13G179300' => 'gma', 'Glyma.13G218151' => 'gma', 'Glyma.13G238800' => 'gma', 'Glyma.13G276900' => 'gma', 'Glyma.14G078200' => 'gma', 'Glyma.15G074500' => 'gma', 'Glyma.15G094100' => 'gma', 'Glyma.17G247200' => 'gma', 'Glyma.18G120100' => 'gma', 'Glyma.20G176000' => 'gma', 'Gohir.A01G063600' => 'ghi', 'Gohir.A01G170301' => 'ghi', 'Gohir.A02G060500' => 'ghi', 'Gohir.A05G133850' => 'ghi', 'Gohir.A05G161400' => 'ghi', 'Gohir.A06G012900' => 'ghi', 'Gohir.A06G035901' => 'ghi', 'Gohir.A06G127100' => 'ghi', 'Gohir.A06G210500' => 'ghi', 'Gohir.A08G008650' => 'ghi', 'Gohir.A09G072700' => 'ghi', 'Gohir.A09G088301' => 'ghi', 'Gohir.A10G040600' => 'ghi', 'Gohir.A12G036300' => 'ghi', 'Gohir.A12G143350' => 'ghi', 'Gohir.A12G165500' => 'ghi', 'Gohir.A13G145700' => 'ghi', 'Gohir.D01G050000' => 'ghi', 'Gohir.D01G051366' => 'ghi', 'Gohir.D01G161350' => 'ghi', 'Gohir.D02G065900' => 'ghi', 'Gohir.D05G164200' => 'ghi', 'Gohir.D05G355500' => 'ghi', 'Gohir.D06G010400' => 'ghi', 'Gohir.D06G111250' => 'ghi', 'Gohir.D06G132000' => 'ghi', 'Gohir.D06G210500' => 'ghi', 'Gohir.D07G165675' => 'ghi', 'Gohir.D08G062240' => 'ghi', 'Gohir.D08G086101' => 'ghi', 'Gohir.D08G138060' => 'ghi', 'Gohir.D09G072300' => 'ghi', 'Gohir.D10G041400' => 'ghi', 'Gohir.D11G191020' => 'ghi', 'Gohir.D11G212066' => 'ghi', 'Gohir.D12G036300' => 'ghi', 'Gohir.D12G168600' => 'ghi', 'Gohir.D13G150600' => 'ghi', 'Gorai.001G057300' => 'gra', 'Gorai.002G069900' => 'gra', 'Gorai.002G200000' => 'gra', 'Gorai.003G067600' => 'gra', 'Gorai.005G074800' => 'gra', 'Gorai.006G087300' => 'gra', 'Gorai.008G037500' => 'gra', 'Gorai.008G181400' => 'gra', 'Gorai.009G169400' => 'gra', 'Gorai.009G387900' => 'gra', 'Gorai.010G013300' => 'gra', 'Gorai.010G153800' => 'gra', 'Gorai.010G255800' => 'gra', 'Gorai.011G043700' => 'gra', 'Gorai.011G198900' => 'gra', 'Gorai.013G168400' => 'gra', 'GSVIVG01005212001' => 'vvi', 'GSVIVG01006163001' => 'vvi', 'GSVIVG01009625001' => 'vvi', 'GSVIVG01014338001' => 'vvi', 'GSVIVG01020005001' => 'vvi', 'GSVIVG01021450001' => 'vvi', 'GSVIVG01023975001' => 'vvi', 'GSVIVG01034490001' => 'vvi', 'HanXRQChr04g0112071' => 'han', 'HanXRQChr05g0131151' => 'han', 'HanXRQChr09g0262371' => 'han', 'HanXRQChr09g0268401' => 'han', 'HanXRQChr10g0279241' => 'han', 'HanXRQChr10g0297961' => 'han', 'HanXRQChr11g0326231' => 'han', 'HanXRQChr11g0328471' => 'han', 'HanXRQChr16g0507941' => 'han', 'HanXRQChr17g0560211' => 'han', 'Haze_02108' => 'cav', 'Haze_02428' => 'cav', 'Haze_05593' => 'cav', 'Haze_06448' => 'cav', 'Haze_09427' => 'cav', 'Haze_12022' => 'cav', 'Haze_17612' => 'cav', 'Haze_17928' => 'cav', 'Hma1.2p1_0032F.1_g019250' => 'hma', 'Hma1.2p1_0163F.1_g072690' => 'hma', 'Hma1.2p1_0265F.1_g106710' => 'hma', 'Hma1.2p1_0286F.1_g113970' => 'hma', 'Hma1.2p1_0363F.1_g136640' => 'hma', 'Hma1.2p1_0584F.1_g183470' => 'hma', 'Hma1.2p1_0885F.1_g232570' => 'hma', 'HPP92_006022' => 'vpl', 'HPP92_007320' => 'vpl', 'HPP92_011521' => 'vpl', 'HPP92_019387' => 'vpl', 'HPP92_024038' => 'vpl', 'Hund05891' => 'sun', 'Hund06450' => 'sun', 'Hund12053' => 'sun', 'Hund16800' => 'sun', 'Hund21222' => 'sun', 'Hund22896' => 'sun', 'Hund23746' => 'sun', 'Hund27083' => 'sun', 'Lalb_Chr02g0141831' => 'lal', 'Lalb_Chr02g0141841' => 'lal', 'Lalb_Chr05g0220411' => 'lal', 'Lalb_Chr06g0162081' => 'lal', 'Lalb_Chr09g0327651' => 'lal', 'Lalb_Chr13g0295051' => 'lal', 'Lalb_Chr15g0086801' => 'lal', 'Lalb_Chr16g0383781' => 'lal', 'Lalb_Chr16g0383791' => 'lal', 'Lalb_Chr18g0055441' => 'lal', 'Lalb_Chr18g0059611' => 'lal', 'Lalb_Chr20g0109661' => 'lal', 'Lalb_Chr20g0109831' => 'lal', 'Lalb_Chr20g0121871' => 'lal', 'Lalb_Chr22g0355361' => 'lal', 'Lalb_Chr25g0286371' => 'lal', 'Lj1A1187G43' => 'lonja', 'Lj1A1205T50' => 'lonja', 'Lj1A800G33' => 'lonja', 'Lj1C1187T7' => 'lonja', 'Lj1C843T11' => 'lonja', 'Lj1g0010940' => 'lja', 'Lj2A288T69' => 'lonja', 'Lj3g0024276' => 'lja', 'Lj4A47T76' => 'lonja', 'Lj4g0005805' => 'lja', 'Lj4g0006097' => 'lja', 'Lj4g0008528' => 'lja', 'Lj4g0024907' => 'lja', 'Lj5g0012472' => 'lja', 'Lj5g0018648' => 'lja', 'Lj6C789G1' => 'lonja', 'Lj6g0004000' => 'lja', 'Lj7A292G67' => 'lonja', 'Lj7A292T64' => 'lonja', 'Lj9A400T58' => 'lonja', 'Lsat_1_v5_gn_1_126181' => 'lsa', 'Lsat_1_v5_gn_4_123041' => 'lsa', 'Lsat_1_v5_gn_4_133620' => 'lsa', 'Lsat_1_v5_gn_4_53221' => 'lsa', 'Lsat_1_v5_gn_4_71961' => 'lsa', 'Lsat_1_v5_gn_7_105241' => 'lsa', 'Lsat_1_v5_gn_7_21361' => 'lsa', 'Lsat_1_v5_gn_7_28860' => 'lsa', 'Lsat_1_v5_gn_7_31260' => 'lsa', 'Lsat_1_v5_gn_8_52801' => 'lsa', 'Manes.02G191400' => 'mes', 'Manes.03G110100' => 'mes', 'Manes.04G071100' => 'mes', 'Manes.05G100500' => 'mes', 'Manes.05G164700' => 'mes', 'Manes.15G087000' => 'mes', 'Manes.15G121500' => 'mes', 'Manes.16G028300' => 'mes', 'Manes.17G046100' => 'mes', 'Manes.17G069800' => 'mes', 'Manes.18G100500' => 'mes', 'Mapoly0002s0109' => 'mpo', 'Mapoly0024s0007' => 'mpo', 'Mapoly0089s0032' => 'mpo', 'MBI04_g42241_MAGBIO' => 'mbi', 'MBI05_g11988_MAGBIO' => 'mbi', 'MBI05_g35452_MAGBIO' => 'mbi', 'MBI07_g30179_MAGBIO' => 'mbi', 'MBI07_g35859_MAGBIO' => 'mbi', 'MBI07_g35860_MAGBIO' => 'mbi', 'MBI07_g37166_MAGBIO' => 'mbi', 'MBI08_g18172_MAGBIO' => 'mbi', 'MBI09_g08441_MAGBIO' => 'mbi', 'MBI13_g01676_MAGBIO' => 'mbi', 'MBI14_g42955_MAGBIO' => 'mbi', 'MBI16_g13161_MAGBIO' => 'mbi', 'MBI17_g27204_MAGBIO' => 'mbi', 'MBI19_g21595_MAGBIO' => 'mbi', 'MD00G1148400' => 'mdo', 'MD02G1301200' => 'mdo', 'MD03G1227800' => 'mdo', 'MD05G1041100' => 'mdo', 'MD05G1124800' => 'mdo', 'MD05G1284000' => 'mdo', 'MD05G1338800' => 'mdo', 'MD05G1338900' => 'mdo', 'MD07G1022800' => 'mdo', 'MD10G1047500' => 'mdo', 'MD10G1127500' => 'mdo', 'MD10G1262300' => 'mdo', 'MD10G1293800' => 'mdo', 'MD16G1074300' => 'mdo', 'Medtr1g021670' => 'mtr', 'Medtr1g096320' => 'mtr', 'Medtr2g013690' => 'mtr', 'Medtr2g019450' => 'mtr', 'Medtr2g085170' => 'mtr', 'Medtr4g088785' => 'mtr', 'Medtr8g055930' => 'mtr', 'Medtr8g085850' => 'mtr', 'MELO3C002605.2' => 'cme', 'MELO3C003891.2' => 'cme', 'MELO3C004012.2' => 'cme', 'MELO3C007134.2' => 'cme', 'MELO3C008118.2' => 'cme', 'MELO3C016700.2' => 'cme', 'MELO3C024127.2' => 'cme', 'MELO3C033361.2' => 'cme', 'MELO3C033362.2' => 'cme', 'Migut.C00430' => 'egut', 'Migut.C01246' => 'egut', 'Migut.E00101' => 'egut', 'Migut.H01486' => 'egut', 'Migut.H01939' => 'egut', 'Migut.K00360' => 'egut', 'Migut.M00910' => 'egut', 'Migut.M01139' => 'egut', 'Migut.N02677' => 'egut', 'MSTRG.13252' => 'ama', 'MSTRG.14701' => 'ama', 'MSTRG.1521' => 'ama', 'MSTRG.15884' => 'ama', 'MSTRG.16242' => 'ama', 'MSTRG.22285' => 'ama', 'MSTRG.22444' => 'ama', 'MSTRG.2349' => 'ama', 'MSTRG.26308' => 'ama', 'MSTRG.28296' => 'ama', 'MSTRG.9895' => 'ama', 'Nitab4.5_0000110g0060' => 'nta', 'Nitab4.5_0000420g0130' => 'nta', 'Nitab4.5_0000422g0030' => 'nta', 'Nitab4.5_0000560g0180' => 'nta', 'Nitab4.5_0000703g0100' => 'nta', 'Nitab4.5_0000786g0200' => 'nta', 'Nitab4.5_0001336g0020' => 'nta', 'Nitab4.5_0001796g0030' => 'nta', 'Nitab4.5_0003348g0060' => 'nta', 'Nitab4.5_0003698g0040' => 'nta', 'Nitab4.5_0003942g0090' => 'nta', 'Nitab4.5_0004775g0070' => 'nta', 'Nitab4.5_0004864g0030' => 'nta', 'Nitab4.5_0005615g0020' => 'nta', 'Nitab4.5_0009288g0030' => 'nta', 'Nitab4.5_0009341g0010' => 'nta', 'Nitab4.5_0009535g0010' => 'nta', 'Nn1g03995' => 'nnu', 'Nn1g04100' => 'nnu', 'Nn1g06530' => 'nnu', 'Nn3g16404' => 'nnu', 'Nn3g17212' => 'nnu', 'Nn3g20776' => 'nnu', 'Nn3g21923' => 'nnu', 'Nn5g27737' => 'nnu', 'Nn5g29461' => 'nnu', 'Nn7g38355' => 'nnu', 'Nn8g39873' => 'nnu', 'Oeu000548.2' => 'oeu', 'Oeu004672.1' => 'oeu', 'Oeu015605.2' => 'oeu', 'Oeu016092.1' => 'oeu', 'Oeu017879.3' => 'oeu', 'Oeu024910.1' => 'oeu', 'Oeu028965.1' => 'oeu', 'Oeu031269.1' => 'oeu', 'Oeu031270.1' => 'oeu', 'Oeu032535.1' => 'oeu', 'Oeu034151.1' => 'oeu', 'Oeu034152.1' => 'oeu', 'Oeu034588.2' => 'oeu', 'Oeu050846.1' => 'oeu', 'Oeu050849.2' => 'oeu', 'Oeu051063.2' => 'oeu', 'Oeu052368.1' => 'oeu', 'Oeu052370.1' => 'oeu', 'Os01g0210400' => 'osa', 'Os01g0304300' => 'osa', 'Os01g0749100' => 'osa', 'Os02g0745800' => 'osa', 'Os03g0769050' => 'osa', 'Os05g0531500' => 'osa', 'Os06g0724300' => 'osa', 'Os11g0198100' => 'osa', 'Peaxi162Scf00069g01425' => 'pax', 'Peaxi162Scf00280g00811' => 'pax', 'Peaxi162Scf00310g00615' => 'pax', 'Peaxi162Scf00362g00542' => 'pax', 'Peaxi162Scf00461g00310' => 'pax', 'Peaxi162Scf00530g00118' => 'pax', 'Peaxi162Scf00541g00057' => 'pax', 'Peaxi162Scf00661g00017' => 'pax', 'Peaxi162Scf00926g00027' => 'pax', 'Peaxi162Scf01064g00263' => 'pax', 'Peaxi162Scf01211g00135' => 'pax', 'PGR004G2336' => 'pgr', 'PGR042G0327' => 'pgr', 'PGR042G1957' => 'pgr', 'PGR042G2003' => 'pgr', 'PGR042G3929' => 'pgr', 'PGR083G1137' => 'pgr', 'PGR083G1364' => 'pgr', 'PGSC0003DMG400003381' => 'stu', 'PGSC0003DMG400003417' => 'stu', 'PGSC0003DMG400008981' => 'stu', 'PGSC0003DMG400012417' => 'stu', 'PGSC0003DMG400012823' => 'stu', 'PGSC0003DMG400016885' => 'stu', 'PGSC0003DMG400022812' => 'stu', 'PGSC0003DMG400029726' => 'stu', 'PGSC0003DMG401009243' => 'stu', 'PGSC0003DMG401031505' => 'stu', 'PGSC0003DMG402031505' => 'stu', 'Phvul.001G017600' => 'pvu', 'Phvul.002G193500' => 'pvu', 'Phvul.002G228900' => 'pvu', 'Phvul.002G236800' => 'pvu', 'Phvul.003G049500' => 'pvu', 'Phvul.005G072000' => 'pvu', 'Phvul.006G164800' => 'pvu', 'Phvul.006G185100' => 'pvu', 'Phvul.007G090000' => 'pvu', 'Potri.001G399800' => 'ptr', 'Potri.002G149900' => 'ptr', 'Potri.004G044100' => 'ptr', 'Potri.004G177600' => 'ptr', 'Potri.009G138000' => 'ptr', 'Potri.010G094000' => 'ptr', 'Potri.011G053000' => 'ptr', 'Potri.011G119300' => 'ptr', 'Potri.013G113700' => 'ptr', 'Potri.018G107800' => 'ptr', 'Potri.019G084100' => 'ptr', 'Pp3c14_23720' => 'ppa', 'Pp3c16_6340' => 'ppa', 'Pp3c23_13420' => 'ppa', 'Pp3c24_2740' => 'ppa', 'Pp3c25_860' => 'ppa', 'Pp3c8_21750' => 'ppa', 'Prupe.1G273000' => 'ppe', 'Prupe.1G273700' => 'ppe', 'Prupe.1G274100' => 'ppe', 'Prupe.2G023300' => 'ppe', 'Prupe.4G048000' => 'ppe', 'Prupe.4G080400' => 'ppe', 'Prupe.4G181200' => 'ppe', 'Prupe.8G056900' => 'ppe', 'Prupe.8G168700' => 'ppe', 'Psat1g189080' => 'psa', 'Psat1g204760' => 'psa', 'Psat4g175560' => 'psa', 'Psat4g177720' => 'psa', 'Psat5g244240' => 'psa', 'Psat6g010720' => 'psa', 'Psat6g187200' => 'psa', 'Psat7g072040' => 'psa', 'PSO017G3501' => 'pso', 'PSO063G2148' => 'pso', 'PSO063G5608' => 'pso', 'PSO210G6392' => 'pso', 'PSO541G2319' => 'pso', 'PSO541G2836' => 'pso', 'PSO541G4012' => 'pso', 'PSO541G6253' => 'pso', 'PSO675G0580' => 'pso', 'PSO675G0856' => 'pso', 'PSO675G5635' => 'pso', 'PSO675G9157' => 'pso', 'PSO832G1660' => 'pso', 'PSO832G1969' => 'pso', 'QL02p007186' => 'qlo', 'QL02p033904' => 'qlo', 'QL03p064391' => 'qlo', 'QL05p040593' => 'qlo', 'QL05p058242' => 'qlo', 'QL08p021825' => 'qlo', 'QL11p004981' => 'qlo', 'RcHm_v2.0_Chr1g0318301' => 'rch', 'RcHm_v2.0_Chr4g0418501' => 'rch', 'RcHm_v2.0_Chr4g0439971' => 'rch', 'RcHm_v2.0_Chr5g0008541' => 'rch', 'RcHm_v2.0_Chr5g0014101' => 'rch', 'RcHm_v2.0_Chr5g0014131' => 'rch', 'RcHm_v2.0_Chr5g0033621' => 'rch', 'RcHm_v2.0_Chr6g0272041' => 'rch', 'RcHm_v2.0_Chr6g0278831' => 'rch', 'Rhsim02G0130400' => 'rsi', 'Rhsim02G0171100' => 'rsi', 'Rhsim05G0053000' => 'rsi', 'Rhsim05G0053100' => 'rsi', 'Rhsim06G0096500' => 'rsi', 'Rhsim06G0096600' => 'rsi', 'Rhsim06G0199100' => 'rsi', 'Rhsim12G0062300' => 'rsi', 'Rhsim12G0062800' => 'rsi', 'Sabra02G0118600' => 'sbr', 'Sabra04G0027300' => 'sbr', 'Sabra04G0119500' => 'sbr', 'Sabra08G0112500' => 'sbr', 'Sabra11G0036800' => 'sbr', 'Sabra11G0103800' => 'sbr', 'Sabra13G0096300' => 'sbr', 'Sabra16G0262300' => 'sbr', 'Sabra18G0091700' => 'sbr', 'Sabra19G0095400' => 'sbr', 'SalBow6G3080' => 'sbo', 'SalBow7G1157' => 'sbo', 'SalBow7G2123' => 'sbo', 'SalBow7G2285' => 'sbo', 'SalBow7G3537' => 'sbo', 'SalBow8G2947' => 'sbo', 'SalBow8G4463' => 'sbo', 'SalBow8G5466' => 'sbo', 'Sc01g0001750' => 'sci', 'Sc02g0006640' => 'sci', 'Sc02g0006670' => 'sci', 'Sc04g0008220' => 'sci', 'Sc05g0006190' => 'sci', 'Sc08g0002760' => 'sci', 'Sc17g0006170' => 'sci', 'Sc22g0002050' => 'sci', 'Sc23g0001190' => 'sci', 'Sc24g0000980' => 'sci', 'Sed0006245' => 'sed', 'Sed0007543' => 'sed', 'Sed0009411' => 'sed', 'Sed0010765' => 'sed', 'Sed0012944' => 'sed', 'Sed0014682' => 'sed', 'Sed0016174' => 'sed', 'Sed0016796' => 'sed', 'Sed0020317' => 'sed', 'Sed0021467' => 'sed', 'SEGI_01316' => 'sgi', 'SEGI_03374' => 'sgi', 'SEGI_16265' => 'sgi', 'SEGI_18569' => 'sgi', 'SEGI_20351' => 'sgi', 'SEGI_26395' => 'sgi', 'SEGI_29469' => 'sgi', 'SEGI_34771' => 'sgi', 'SEGI_36769' => 'sgi', 'SEGI_37139' => 'sgi', 'SGA_v2.0_scaffold100G29687' => 'sas', 'SGA_v2.0_scaffold118G32472' => 'sas', 'SGA_v2.0_scaffold14G07051' => 'sas', 'SGA_v2.0_scaffold183G39845' => 'sas', 'SGA_v2.0_scaffold1G00174' => 'sas', 'SGA_v2.0_scaffold22G09714' => 'sas', 'SGA_v2.0_scaffold333G48992' => 'sas', 'SGA_v2.0_scaffold46G17491' => 'sas', 'SGA_v2.0_scaffold49G18294' => 'sas', 'SGA_v2.0_scaffold63G21658' => 'sas', 'SHI01741' => 'shi', 'SHI05771' => 'shi', 'SHI18077' => 'shi', 'SHI20525' => 'shi', 'SHI20527' => 'shi', 'SHI20528' => 'shi', 'SMO172G0185' => 'smo', 'SMO198G0020' => 'smo', 'SMO351G0006' => 'smo', 'SMO356G0118' => 'smo', 'SMO358G0296' => 'smo', 'SMO367G0079' => 'smo', 'SMO367G1277' => 'smo', 'Solyc01g014220.3' => 'sly', 'Solyc01g111770.2' => 'sly', 'Solyc02g078180.3' => 'sly', 'Solyc03g006430.3' => 'sly', 'Solyc03g006456.1' => 'sly', 'Solyc03g079860.2' => 'sly', 'Solyc04g079770.3' => 'sly', 'Solyc05g007430.4' => 'sly', 'Solyc07g063150.3' => 'sly', 'Solyc08g016620.3' => 'sly', 'Solyc09g057590.3' => 'sly', 'Solyc09g057600.1' => 'sly', 'Solyc10g009050.3' => 'sly', 'Solyc11g017420.2' => 'sly', 'Sopen01g053810' => 'spe', 'Sopen02g023040' => 'spe', 'Sopen03g002440' => 'spe', 'Sopen04g033350' => 'spe', 'Sopen05g003310' => 'spe', 'Sopen07g004050' => 'spe', 'Sopen07g031340' => 'spe', 'Sopen08g006990' => 'spe', 'Sopen10g004830' => 'spe', 'Sopen11g009370' => 'spe', 'Sp1g24450' => 'spa', 'Sp1g29670' => 'spa', 'Sp1g39600' => 'spa', 'Sp2g11080' => 'spa', 'Sp2g13970' => 'spa', 'Sp4g16130' => 'spa', 'Sp6g13080' => 'spa', 'Sp7g37270' => 'spa', 'TAR371G0065' => 'tar', 'TAR376G0340' => 'tar', 'TAR376G0435' => 'tar', 'TAR381G0002' => 'tar', 'TAR381G1236' => 'tar', 'TAR624G0055' => 'tar', 'TAR624G0324' => 'tar', 'TAR624G0696' => 'tar', 'TAR624G0906' => 'tar', 'TAR625G0107' => 'tar', 'TAR626G0015' => 'tar', 'TAR626G1356' => 'tar', 'TAR627G0888' => 'tar', 'TAR628G0399' => 'tar', 'TAR628G1327' => 'tar', 'TAR629G2831' => 'tar', 'TAR629G2874' => 'tar', 'TAR633G1432' => 'tar', 'TAR633G2771' => 'tar', 'THA.LOC104803394' => 'tha', 'THA.LOC104805153' => 'tha', 'THA.LOC104806784' => 'tha', 'THA.LOC104810473' => 'tha', 'THA.LOC104813100' => 'tha', 'THA.LOC104814215' => 'tha', 'THA.LOC104815554' => 'tha', 'THA.LOC104820544' => 'tha', 'THA.LOC104824754' => 'tha', 'THA.LOC104827717' => 'tha', 'Thecc.02G031400' => 'tca', 'Thecc.02G055900' => 'tca', 'Thecc.02G350800' => 'tca', 'Thecc.06G150900' => 'tca', 'Thecc.06G186600' => 'tca', 'Thecc.07G089600' => 'tca', 'Thecc.08G020400' => 'tca', 'Thecc.08G182100' => 'tca', 'Thhalv10000873m.g' => 'esa', 'Thhalv10004185m.g' => 'esa', 'Thhalv10006981m.g' => 'esa', 'Thhalv10007204m.g' => 'esa', 'Thhalv10011374m.g' => 'esa', 'Thhalv10013482m.g' => 'esa', 'Thhalv10017801m.g' => 'esa', 'Thhalv10024983m.g' => 'esa', 'TPR.G12072' => 'tpr', 'TPR.G15769' => 'tpr', 'TPR.G16504' => 'tpr', 'TPR.G16506' => 'tpr', 'TPR.G24345' => 'tpr', 'TPR.G26666' => 'tpr', 'TPR.G27320' => 'tpr', 'TPR.G31819' => 'tpr', 'TPR.G38879' => 'tpr', 'TPR.G39015' => 'tpr', 'TPR.G8819' => 'tpr', 'TWI09G0924' => 'twi', 'TWI12G0811' => 'twi', 'TWI12G1294' => 'twi', 'TWI31G0150' => 'twi', 'TWI36G1262' => 'twi', 'TWI38G1287' => 'twi', 'TWI38G1633' => 'twi', 'TWI38G1982' => 'twi', 'TWI39G0116' => 'twi', 'TWI60G1011' => 'twi', 'TWI63G0171' => 'twi', 'TWI73G0839' => 'twi', 'TWI79G1511' => 'twi', 'unitig_0.g915' => 'ugi', 'unitig_0.g916' => 'ugi', 'unitig_21.g20219' => 'ugi', 'unitig_21.g20416' => 'ugi', 'unitig_578.g16132' => 'ugi', 'unitig_578.g16718' => 'ugi', 'unitig_62.g23481' => 'ugi', 'unitig_744.g24535' => 'ugi', 'unitig_749.g13525' => 'ugi', 'vmacro01248' => 'vma', 'vmacro02290' => 'vma', 'vmacro10946' => 'vma', 'vmacro11865' => 'vma', 'vmacro12493' => 'vma', 'vmacro17322' => 'vma', 'vmacro21599' => 'vma', 'vmacro23041' => 'vma', 'VMungo0251G0004' => 'vmu', 'VMungo0251G2639' => 'vmu', 'VMungo0251G2967' => 'vmu', 'VMungo0540G0864' => 'vmu', 'VMungo0540G1569' => 'vmu', 'VMungo0647G0317' => 'vmu', 'VMungo0720G1373' => 'vmu', 'VMungo0720G1508' => 'vmu', 'VMungo1080G0485' => 'vmu', 'VMungo1215G3177' => 'vmu', 'Zm00001eb112600' => 'zma', 'Zm00001eb120220' => 'zma', 'Zm00001eb153240' => 'zma', 'Zm00001eb168880' => 'zma', 'Zm00001eb213920' => 'zma', 'Zm00001eb228280' => 'zma', 'Zm00001eb254580' => 'zma', 'Zm00001eb272180' => 'zma', 'Zm00001eb293190' => 'zma', 'Zm00001eb322930' => 'zma', 'Zm00001eb353360' => 'zma', 'Zm00001eb353390' => 'zma', 'Zm00001eb353430' => 'zma', 'Zm00001eb353440' => 'zma', 'Zm00001eb353780' => 'zma' ), 'gf_id' => 'HOM05D000499', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000499' ), 'data_identifier' => 'HOM05D000499', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000499', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1066', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p29780' => 'bna', 'A02p33180' => 'bna', 'A03p16470' => 'bna', 'A03p66010' => 'bna', 'A04p25970' => 'bna', 'A06p01270' => 'bna', 'A06p46080' => 'bna', 'A07p11400' => 'bna', 'A08p01840' => 'bna', 'A08p08230' => 'bna', 'A08p25740' => 'bna', 'A09p32070' => 'bna', 'A09p37830' => 'bna', 'A09p42840' => 'bna', 'A09p42850' => 'bna', 'Aa31LG10G2060' => 'aar', 'Aa31LG2G7410' => 'aar', 'Aa31LG6G10200' => 'aar', 'Aa31LG6G16680' => 'aar', 'Aa31LG6G8470' => 'aar', 'Aa31LG9G12730' => 'aar', 'Aa31LG9G13680' => 'aar', 'Aa31LG9G14920' => 'aar', 'Aa31LG9G6650' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4977' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5467' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3254' => 'aag', 'Actinidia02578' => 'ach', 'Actinidia07693' => 'ach', 'Actinidia08413' => 'ach', 'Actinidia08414' => 'ach', 'Actinidia15289' => 'ach', 'Actinidia19871' => 'ach', 'Actinidia21475' => 'ach', 'Actinidia22576' => 'ach', 'Actinidia28327' => 'ach', 'Actinidia32491' => 'ach', 'Actinidia39463' => 'ach', 'Actinidia39571' => 'ach', 'Ah.01g013750' => 'amhyb', 'Ah.01g023210' => 'amhyb', 'Ah.04g164850' => 'amhyb', 'Ah.05g178060' => 'amhyb', 'Ah.07g204270' => 'amhyb', 'Ah.07g208480' => 'amhyb', 'Ah.09g237410' => 'amhyb', 'Ah.14g089460' => 'amhyb', 'AL1G41790' => 'aly', 'AL1G49050' => 'aly', 'AL1G53810' => 'aly', 'AL1G61400' => 'aly', 'AL4G18580' => 'aly', 'AL5G12510' => 'aly', 'AL5G12540' => 'aly', 'AL6G43230' => 'aly', 'AL7G10370' => 'aly', 'AL7G19250' => 'aly', 'AL8G12240' => 'aly', 'AL8G18540' => 'aly', 'Aqoxy1G02409' => 'aox', 'Aqoxy2G03993' => 'aox', 'Aqoxy3G03357' => 'aox', 'Aqoxy4G00785' => 'aox', 'Aqoxy5G02598' => 'aox', 'Aqoxy6G00132' => 'aox', 'Aqoxy7G01776' => 'aox', 'Aqoxy7G02316' => 'aox', 'Aqoxy7G03973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.12AFKW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B8730' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27IQR1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3F75VG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3RE0GA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41TCQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.527VTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FIR39' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5W8UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DA38EV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ63HS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H1I32C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HC27T5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4M8AP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7N3CZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9UVDZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LS1NQA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT1D4B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SKC4TM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCFV76' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF9Q1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQWD9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1ZM88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WE07RT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YCK7VH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJE6Q6' => 'arhy', 'AT1G28240' => 'ath', 'AT1G34550' => 'ath', 'AT1G53040' => 'ath', 'AT2G02910' => 'ath', 'AT4G09630' => 'ath', 'AT4G38500' => 'ath', 'AT5G42660' => 'ath', 'AT5G46220' => 'ath', 'ATR0152G026' => 'atr', 'ATR0564G343' => 'atr', 'ATR0706G151' => 'atr', 'ATR0733G207' => 'atr', 'ATR0751G234' => 'atr', 'ATR0807G048' => 'atr', 'ATR1091G084' => 'atr', 'Atru.chr10.1229' => 'acertr', 'Atru.chr10.1230' => 'acertr', 'Atru.chr10.1874' => 'acertr', 'Atru.chr11.1808' => 'acertr', 'Atru.chr13.1795' => 'acertr', 'Atru.chr13.570' => 'acertr', 'Atru.chr2.2608' => 'acertr', 'Atru.chr2.2609' => 'acertr', 'Atru.chr5.3428' => 'acertr', 'Atru.chr8.1171' => 'acertr', 'AUR62004651' => 'cqu', 'AUR62008675' => 'cqu', 'AUR62010014' => 'cqu', 'AUR62013004' => 'cqu', 'AUR62014825' => 'cqu', 'AUR62015015' => 'cqu', 'AUR62015151' => 'cqu', 'AUR62017020' => 'cqu', 'AUR62019422' => 'cqu', 'AUR62023570' => 'cqu', 'AUR62025571' => 'cqu', 'AUR62029098' => 'cqu', 'AUR62033863' => 'cqu', 'AUR62034296' => 'cqu', 'AUR62040075' => 'cqu', 'BcaB02g07334' => 'bca', 'BcaB02g10575' => 'bca', 'BcaB03g12119' => 'bca', 'BcaB03g12120' => 'bca', 'BcaB03g13945' => 'bca', 'BcaB04g17123' => 'bca', 'BcaB04g17867' => 'bca', 'BcaB04g19839' => 'bca', 'BcaB07g30317' => 'bca', 'BcaB07g32432' => 'bca', 'BcaB07g33362' => 'bca', 'BcaB08g36611' => 'bca', 'BcaC01g00028' => 'bca', 'BcaC01g01356' => 'bca', 'BcaC01g02034' => 'bca', 'BcaC01g06051' => 'bca', 'BcaC03g16839' => 'bca', 'BcaC03g17176' => 'bca', 'BcaC05g26829' => 'bca', 'BcaC06g31490' => 'bca', 'BcaC06g35344' => 'bca', 'BcaC06g36570' => 'bca', 'BcaC07g37537' => 'bca', 'BcaC08g43491' => 'bca', 'BcaC08g43773' => 'bca', 'BcaNung00234' => 'bca', 'BcaNung01982' => 'bca', 'BcaNung03707' => 'bca', 'BcaNung06454' => 'bca', 'BolC2t10762H' => 'bol', 'BolC2t11191H' => 'bol', 'BolC3t14322H' => 'bol', 'BolC3t19747H' => 'bol', 'BolC3t21425H' => 'bol', 'BolC4t27800H' => 'bol', 'BolC5t31423H' => 'bol', 'BolC6t35951H' => 'bol', 'BolC6t36282H' => 'bol', 'BolC7t40678H' => 'bol', 'BolC7t40679H' => 'bol', 'BolC7t42222H' => 'bol', 'BolC7t43492H' => 'bol', 'BolC7t46785H' => 'bol', 'BolC8t47853H' => 'bol', 'BolC9t56805H' => 'bol', 'BraA02t08000Z' => 'bra', 'BraA02t08341Z' => 'bra', 'BraA03t10936Z' => 'bra', 'BraA03t15657Z' => 'bra', 'BraA04t18100Z' => 'bra', 'BraA05t20523Z' => 'bra', 'BraA06t23353Z' => 'bra', 'BraA06t27473Z' => 'bra', 'BraA06t27769Z' => 'bra', 'BraA07t28928Z' => 'bra', 'BraA08t32236Z' => 'bra', 'BraA08t32841Z' => 'bra', 'BraA08t34524Z' => 'bra', 'BraA09t38742Z' => 'bra', 'BraA09t39295Z' => 'bra', 'C02p47180' => 'bna', 'C02p50990' => 'bna', 'C03p19360' => 'bna', 'C03p74950' => 'bna', 'C03p91000' => 'bna', 'C04p63260' => 'bna', 'C05p27050' => 'bna', 'C06p08750' => 'bna', 'C06p11490' => 'bna', 'C07p02820' => 'bna', 'C07p17180' => 'bna', 'C07p29440' => 'bna', 'C07p63730' => 'bna', 'C09p39260' => 'bna', 'CAN.G1164.34' => 'can', 'CAN.G1164.39' => 'can', 'CAN.G1530.3' => 'can', 'CAN.G162.61' => 'can', 'CAN.G176.6' => 'can', 'CAN.G289.49' => 'can', 'CAN.G370.21' => 'can', 'CAN.G370.22' => 'can', 'CAN.G371.117' => 'can', 'CAN.G58.37' => 'can', 'CAN.G588.98' => 'can', 'CANSAT21G2266' => 'cansat', 'CANSAT25G2799' => 'cansat', 'CANSAT35G0862' => 'cansat', 'CANSAT35G1704' => 'cansat', 'CANSAT35G1760' => 'cansat', 'CANSAT56G3971' => 'cansat', 'CANSAT56G4116' => 'cansat', 'CANSAT80G1259' => 'cansat', 'CARHR027730' => 'chi', 'CARHR033880' => 'chi', 'CARHR043270' => 'chi', 'CARHR145330' => 'chi', 'CARHR145340' => 'chi', 'CARHR175570' => 'chi', 'CARHR181570' => 'chi', 'CARHR258470' => 'chi', 'CARHR260490' => 'chi', 'CARHR294220' => 'chi', 'Carub.0001s2668' => 'cru', 'Carub.0001s3257' => 'cru', 'Carub.0001s4220' => 'cru', 'Carub.0005s0179' => 'cru', 'Carub.0006s2807' => 'cru', 'Carub.0007s0039' => 'cru', 'Carub.0008s0169' => 'cru', 'Carub.0008s0636' => 'cru', 'Ca_00338_v3' => 'car', 'Ca_00542_v3' => 'car', 'Ca_01844_v3' => 'car', 'Ca_10611_v3' => 'car', 'Ca_13326_v3' => 'car', 'Ca_17944_v3' => 'car', 'Ca_18546_v3' => 'car', 'Ca_24219_v3' => 'car', 'Ca_29972_v3' => 'car', 'CBR_g3681' => 'cbr', 'CBR_g40021' => 'cbr', 'Cc01_g08140' => 'ccan', 'Cc02_g13410' => 'ccan', 'Cc02_g37480' => 'ccan', 'Cc05_g12030' => 'ccan', 'Cc09_g03370' => 'ccan', 'Cc09_g10300' => 'ccan', 'Cc10_g03530' => 'ccan', 'Cc10_g11380' => 'ccan', 'CDE01G0176' => 'cde', 'CDE02G0675' => 'cde', 'CDE02G0942' => 'cde', 'CDE02G1153' => 'cde', 'CDE02G4177' => 'cde', 'CDE04G2117' => 'cde', 'CDE04G2736' => 'cde', 'CDE08G1161' => 'cde', 'CDE09G1238' => 'cde', 'Cfa000467' => 'cfa', 'Cfa000947' => 'cfa', 'Cfa004969' => 'cfa', 'Cfa005284' => 'cfa', 'Cfa008993' => 'cfa', 'Cfa018187' => 'cfa', 'Cfa018454' => 'cfa', 'Cfa020585' => 'cfa', 'Ciclev10000424m.g' => 'ccl', 'Ciclev10003605m.g' => 'ccl', 'Ciclev10007828m.g' => 'ccl', 'Ciclev10014620m.g' => 'ccl', 'Ciclev10015169m.g' => 'ccl', 'Ciclev10018291m.g' => 'ccl', 'Ciclev10028256m.g' => 'ccl', 'Ciclev10033822m.g' => 'ccl', 'CiPaw.05G060300' => 'cil', 'CiPaw.05G085000' => 'cil', 'CiPaw.06G083700' => 'cil', 'CiPaw.06G120300' => 'cil', 'CiPaw.09G060500' => 'cil', 'CiPaw.09G123800' => 'cil', 'CiPaw.11G169700' => 'cil', 'CiPaw.12G118300' => 'cil', 'CiPaw.15G071000' => 'cil', 'CiPaw.15G081900' => 'cil', 'ClCG01G024610' => 'cla', 'ClCG03G006070' => 'cla', 'ClCG05G019250' => 'cla', 'ClCG09G009500' => 'cla', 'ClCG11G008200' => 'cla', 'ClCG11G018080' => 'cla', 'COL.COLO4_17373' => 'col', 'COL.COLO4_22994' => 'col', 'COL.COLO4_26389' => 'col', 'COL.COLO4_27170' => 'col', 'COL.COLO4_31074' => 'col', 'COL.COLO4_31465' => 'col', 'COL.COLO4_36438' => 'col', 'COL.COLO4_36439' => 'col', 'Cpa.g.c38781' => 'cpa', 'Cpa.g.sc128.12' => 'cpa', 'Cpa.g.sc166.7' => 'cpa', 'Cpa.g.sc166.8' => 'cpa', 'Cpa.g.sc20.111' => 'cpa', 'Cpa.g.sc27.31' => 'cpa', 'Cpa.g.sc64.36' => 'cpa', 'Cpa.g.sc64.37' => 'cpa', 'Cpa.g.sc66.49' => 'cpa', 'Cpa.g.sc80.64' => 'cpa', 'CsaV3_1G012320' => 'csa', 'CsaV3_2G008480' => 'csa', 'CsaV3_2G033450' => 'csa', 'CsaV3_3G044830' => 'csa', 'CsaV3_4G033710' => 'csa', 'CsaV3_6G051730' => 'csa', 'CsaV3_7G025350' => 'csa', 'CSS0001067' => 'camsi', 'CSS0005996' => 'camsi', 'CSS0006590' => 'camsi', 'CSS0009673' => 'camsi', 'CSS0010201' => 'camsi', 'CSS0010549' => 'camsi', 'CSS0011364' => 'camsi', 'CSS0014473' => 'camsi', 'CSS0014961' => 'camsi', 'CSS0020191' => 'camsi', 'CSS0021165' => 'camsi', 'CSS0022306' => 'camsi', 'CSS0030591' => 'camsi', 'CSS0030696' => 'camsi', 'CSS0032653' => 'camsi', 'CSS0037487' => 'camsi', 'CSS0041102' => 'camsi', 'CSS0041261' => 'camsi', 'CSS0046246' => 'camsi', 'CSS0049256' => 'camsi', 'DCAR_004075' => 'dca', 'DCAR_011538' => 'dca', 'DCAR_019553' => 'dca', 'DCAR_020952' => 'dca', 'DCAR_021739' => 'dca', 'DCAR_027407' => 'dca', 'DCAR_027913' => 'dca', 'DCAR_028066' => 'dca', 'Dinv05899' => 'din', 'Dinv07563' => 'din', 'Dinv08010' => 'din', 'Dinv14125' => 'din', 'Dinv20172' => 'din', 'Dinv30743' => 'din', 'Dinv31229' => 'din', 'Dinv34162' => 'din', 'Dinv36028' => 'din', 'Dinv39368' => 'din', 'Dinv40565' => 'din', 'Dinv41706' => 'din', 'Duzib052G0089' => 'dzi', 'Duzib116G0641' => 'dzi', 'Duzib132G0069' => 'dzi', 'Duzib132G1219' => 'dzi', 'Duzib147G0278' => 'dzi', 'Duzib160G0480' => 'dzi', 'Duzib170G0661' => 'dzi', 'Duzib177G0591' => 'dzi', 'Duzib187G1353' => 'dzi', 'Duzib192G0858' => 'dzi', 'Duzib192G0883' => 'dzi', 'Duzib213G0506' => 'dzi', 'Duzib235G0289' => 'dzi', 'Duzib251G0422' => 'dzi', 'ECA232G3898' => 'eca', 'ECA233G5950' => 'eca', 'ECA234G1699' => 'eca', 'ECA234G2421' => 'eca', 'ECA236G0426' => 'eca', 'ECA236G4331' => 'eca', 'ECA248G2573' => 'eca', 'EL10Ac1g00077' => 'bvu', 'EL10Ac1g01746' => 'bvu', 'EL10Ac2g03464' => 'bvu', 'EL10Ac4g08176' => 'bvu', 'EL10Ac7g17521' => 'bvu', 'EL10Ac8g20386' => 'bvu', 'EL10Ac9g21343' => 'bvu', 'EL10Ac9g22688' => 'bvu', 'Eucgr.B03434' => 'egr', 'Eucgr.D00618' => 'egr', 'Eucgr.E02395' => 'egr', 'Eucgr.F01129' => 'egr', 'Eucgr.F02622' => 'egr', 'Eucgr.F04207' => 'egr', 'FAN01G0570' => 'fan', 'FAN03G3351' => 'fan', 'FAN06G3702' => 'fan', 'FAN07G2149' => 'fan', 'FAN10G3758' => 'fan', 'FAN11G1170' => 'fan', 'FAN11G2050' => 'fan', 'FAN11G2724' => 'fan', 'FAN12G1700' => 'fan', 'FAN12G2028' => 'fan', 'FAN15G1160' => 'fan', 'FAN15G3063' => 'fan', 'FAN16G2540' => 'fan', 'FAN16G3077' => 'fan', 'FAN16G3624' => 'fan', 'FAN17G0221' => 'fan', 'FAN20G2492' => 'fan', 'FAN20G2905' => 'fan', 'FAN21G0548' => 'fan', 'FAN21G1300' => 'fan', 'FAN22G0077' => 'fan', 'FAN22G1315' => 'fan', 'FAN24G1280' => 'fan', 'FAN24G1445' => 'fan', 'FAN24G3527' => 'fan', 'FAN25G0464' => 'fan', 'FAN25G2885' => 'fan', 'FAN25G3270' => 'fan', 'FAN27G1101' => 'fan', 'FAN27G2846' => 'fan', 'FAN27G3524' => 'fan', 'FvH4_2g11770' => 'fve', 'FvH4_2g15630' => 'fve', 'FvH4_3g05570' => 'fve', 'FvH4_3g09110' => 'fve', 'FvH4_3g19940' => 'fve', 'FvH4_4g04821' => 'fve', 'FvH4_4g31480' => 'fve', 'FvH4_7g01740' => 'fve', 'Glyma.05G130400' => 'gma', 'Glyma.05G156400' => 'gma', 'Glyma.07G197000' => 'gma', 'Glyma.08G085151' => 'gma', 'Glyma.08G114500' => 'gma', 'Glyma.08G300400' => 'gma', 'Glyma.10G215800' => 'gma', 'Glyma.12G224400' => 'gma', 'Glyma.13G179300' => 'gma', 'Glyma.13G218151' => 'gma', 'Glyma.13G238800' => 'gma', 'Glyma.13G276900' => 'gma', 'Glyma.14G078200' => 'gma', 'Glyma.15G074500' => 'gma', 'Glyma.15G094100' => 'gma', 'Glyma.17G247200' => 'gma', 'Glyma.18G120100' => 'gma', 'Glyma.20G176000' => 'gma', 'Gohir.A01G063600' => 'ghi', 'Gohir.A01G170301' => 'ghi', 'Gohir.A02G060500' => 'ghi', 'Gohir.A05G133850' => 'ghi', 'Gohir.A05G161400' => 'ghi', 'Gohir.A06G012900' => 'ghi', 'Gohir.A06G035901' => 'ghi', 'Gohir.A06G127100' => 'ghi', 'Gohir.A06G210500' => 'ghi', 'Gohir.A08G008650' => 'ghi', 'Gohir.A09G072700' => 'ghi', 'Gohir.A09G088301' => 'ghi', 'Gohir.A10G040600' => 'ghi', 'Gohir.A12G036300' => 'ghi', 'Gohir.A12G143350' => 'ghi', 'Gohir.A12G165500' => 'ghi', 'Gohir.A13G145700' => 'ghi', 'Gohir.D01G050000' => 'ghi', 'Gohir.D01G051366' => 'ghi', 'Gohir.D01G161350' => 'ghi', 'Gohir.D02G065900' => 'ghi', 'Gohir.D05G164200' => 'ghi', 'Gohir.D05G355500' => 'ghi', 'Gohir.D06G010400' => 'ghi', 'Gohir.D06G111250' => 'ghi', 'Gohir.D06G132000' => 'ghi', 'Gohir.D06G210500' => 'ghi', 'Gohir.D07G165675' => 'ghi', 'Gohir.D08G062240' => 'ghi', 'Gohir.D08G086101' => 'ghi', 'Gohir.D08G138060' => 'ghi', 'Gohir.D09G072300' => 'ghi', 'Gohir.D10G041400' => 'ghi', 'Gohir.D11G191020' => 'ghi', 'Gohir.D11G212066' => 'ghi', 'Gohir.D12G036300' => 'ghi', 'Gohir.D12G168600' => 'ghi', 'Gohir.D13G150600' => 'ghi', 'Gorai.001G057300' => 'gra', 'Gorai.002G069900' => 'gra', 'Gorai.002G200000' => 'gra', 'Gorai.003G067600' => 'gra', 'Gorai.005G074800' => 'gra', 'Gorai.006G087300' => 'gra', 'Gorai.008G037500' => 'gra', 'Gorai.008G181400' => 'gra', 'Gorai.009G169400' => 'gra', 'Gorai.009G387900' => 'gra', 'Gorai.010G013300' => 'gra', 'Gorai.010G153800' => 'gra', 'Gorai.010G255800' => 'gra', 'Gorai.011G043700' => 'gra', 'Gorai.011G198900' => 'gra', 'Gorai.013G168400' => 'gra', 'GSVIVG01005212001' => 'vvi', 'GSVIVG01006163001' => 'vvi', 'GSVIVG01009625001' => 'vvi', 'GSVIVG01014338001' => 'vvi', 'GSVIVG01020005001' => 'vvi', 'GSVIVG01021450001' => 'vvi', 'GSVIVG01023975001' => 'vvi', 'GSVIVG01034490001' => 'vvi', 'HanXRQChr04g0112071' => 'han', 'HanXRQChr05g0131151' => 'han', 'HanXRQChr09g0262371' => 'han', 'HanXRQChr09g0268401' => 'han', 'HanXRQChr10g0279241' => 'han', 'HanXRQChr10g0297961' => 'han', 'HanXRQChr11g0326231' => 'han', 'HanXRQChr11g0328471' => 'han', 'HanXRQChr16g0507941' => 'han', 'HanXRQChr17g0560211' => 'han', 'Haze_02108' => 'cav', 'Haze_02428' => 'cav', 'Haze_05593' => 'cav', 'Haze_06448' => 'cav', 'Haze_09427' => 'cav', 'Haze_12022' => 'cav', 'Haze_17612' => 'cav', 'Haze_17928' => 'cav', 'Hma1.2p1_0032F.1_g019250' => 'hma', 'Hma1.2p1_0163F.1_g072690' => 'hma', 'Hma1.2p1_0265F.1_g106710' => 'hma', 'Hma1.2p1_0286F.1_g113970' => 'hma', 'Hma1.2p1_0363F.1_g136640' => 'hma', 'Hma1.2p1_0584F.1_g183470' => 'hma', 'Hma1.2p1_0885F.1_g232570' => 'hma', 'HPP92_006022' => 'vpl', 'HPP92_007320' => 'vpl', 'HPP92_011521' => 'vpl', 'HPP92_019387' => 'vpl', 'HPP92_024038' => 'vpl', 'Hund05891' => 'sun', 'Hund06450' => 'sun', 'Hund12053' => 'sun', 'Hund16800' => 'sun', 'Hund21222' => 'sun', 'Hund22896' => 'sun', 'Hund23746' => 'sun', 'Hund27083' => 'sun', 'Lalb_Chr02g0141831' => 'lal', 'Lalb_Chr02g0141841' => 'lal', 'Lalb_Chr05g0220411' => 'lal', 'Lalb_Chr06g0162081' => 'lal', 'Lalb_Chr09g0327651' => 'lal', 'Lalb_Chr13g0295051' => 'lal', 'Lalb_Chr15g0086801' => 'lal', 'Lalb_Chr16g0383781' => 'lal', 'Lalb_Chr16g0383791' => 'lal', 'Lalb_Chr18g0055441' => 'lal', 'Lalb_Chr18g0059611' => 'lal', 'Lalb_Chr20g0109661' => 'lal', 'Lalb_Chr20g0109831' => 'lal', 'Lalb_Chr20g0121871' => 'lal', 'Lalb_Chr22g0355361' => 'lal', 'Lalb_Chr25g0286371' => 'lal', 'Lj1A1187G43' => 'lonja', 'Lj1A1205T50' => 'lonja', 'Lj1A800G33' => 'lonja', 'Lj1C1187T7' => 'lonja', 'Lj1C843T11' => 'lonja', 'Lj1g0010940' => 'lja', 'Lj2A288T69' => 'lonja', 'Lj3g0024276' => 'lja', 'Lj4A47T76' => 'lonja', 'Lj4g0005805' => 'lja', 'Lj4g0006097' => 'lja', 'Lj4g0008528' => 'lja', 'Lj4g0024907' => 'lja', 'Lj5g0012472' => 'lja', 'Lj5g0018648' => 'lja', 'Lj6C789G1' => 'lonja', 'Lj6g0004000' => 'lja', 'Lj7A292G67' => 'lonja', 'Lj7A292T64' => 'lonja', 'Lj9A400T58' => 'lonja', 'Lsat_1_v5_gn_1_126181' => 'lsa', 'Lsat_1_v5_gn_4_123041' => 'lsa', 'Lsat_1_v5_gn_4_133620' => 'lsa', 'Lsat_1_v5_gn_4_53221' => 'lsa', 'Lsat_1_v5_gn_4_71961' => 'lsa', 'Lsat_1_v5_gn_7_105241' => 'lsa', 'Lsat_1_v5_gn_7_21361' => 'lsa', 'Lsat_1_v5_gn_7_28860' => 'lsa', 'Lsat_1_v5_gn_7_31260' => 'lsa', 'Lsat_1_v5_gn_8_52801' => 'lsa', 'Manes.02G191400' => 'mes', 'Manes.03G110100' => 'mes', 'Manes.04G071100' => 'mes', 'Manes.05G100500' => 'mes', 'Manes.05G164700' => 'mes', 'Manes.15G087000' => 'mes', 'Manes.15G121500' => 'mes', 'Manes.16G028300' => 'mes', 'Manes.17G046100' => 'mes', 'Manes.17G069800' => 'mes', 'Manes.18G100500' => 'mes', 'Mapoly0002s0109' => 'mpo', 'Mapoly0024s0007' => 'mpo', 'Mapoly0089s0032' => 'mpo', 'MBI04_g42241_MAGBIO' => 'mbi', 'MBI05_g11988_MAGBIO' => 'mbi', 'MBI05_g35452_MAGBIO' => 'mbi', 'MBI07_g30179_MAGBIO' => 'mbi', 'MBI07_g35859_MAGBIO' => 'mbi', 'MBI07_g35860_MAGBIO' => 'mbi', 'MBI07_g37166_MAGBIO' => 'mbi', 'MBI08_g18172_MAGBIO' => 'mbi', 'MBI09_g08441_MAGBIO' => 'mbi', 'MBI13_g01676_MAGBIO' => 'mbi', 'MBI14_g42955_MAGBIO' => 'mbi', 'MBI16_g13161_MAGBIO' => 'mbi', 'MBI17_g27204_MAGBIO' => 'mbi', 'MBI19_g21595_MAGBIO' => 'mbi', 'MD00G1148400' => 'mdo', 'MD02G1301200' => 'mdo', 'MD03G1227800' => 'mdo', 'MD05G1041100' => 'mdo', 'MD05G1124800' => 'mdo', 'MD05G1284000' => 'mdo', 'MD05G1338800' => 'mdo', 'MD05G1338900' => 'mdo', 'MD07G1022800' => 'mdo', 'MD10G1047500' => 'mdo', 'MD10G1127500' => 'mdo', 'MD10G1262300' => 'mdo', 'MD10G1293800' => 'mdo', 'MD16G1074300' => 'mdo', 'Medtr1g021670' => 'mtr', 'Medtr1g096320' => 'mtr', 'Medtr2g013690' => 'mtr', 'Medtr2g019450' => 'mtr', 'Medtr2g085170' => 'mtr', 'Medtr4g088785' => 'mtr', 'Medtr8g055930' => 'mtr', 'Medtr8g085850' => 'mtr', 'MELO3C002605.2' => 'cme', 'MELO3C003891.2' => 'cme', 'MELO3C004012.2' => 'cme', 'MELO3C007134.2' => 'cme', 'MELO3C008118.2' => 'cme', 'MELO3C016700.2' => 'cme', 'MELO3C024127.2' => 'cme', 'MELO3C033361.2' => 'cme', 'MELO3C033362.2' => 'cme', 'Migut.C00430' => 'egut', 'Migut.C01246' => 'egut', 'Migut.E00101' => 'egut', 'Migut.H01486' => 'egut', 'Migut.H01939' => 'egut', 'Migut.K00360' => 'egut', 'Migut.M00910' => 'egut', 'Migut.M01139' => 'egut', 'Migut.N02677' => 'egut', 'MSTRG.13252' => 'ama', 'MSTRG.14701' => 'ama', 'MSTRG.1521' => 'ama', 'MSTRG.15884' => 'ama', 'MSTRG.16242' => 'ama', 'MSTRG.22285' => 'ama', 'MSTRG.22444' => 'ama', 'MSTRG.2349' => 'ama', 'MSTRG.26308' => 'ama', 'MSTRG.28296' => 'ama', 'MSTRG.9895' => 'ama', 'Nitab4.5_0000110g0060' => 'nta', 'Nitab4.5_0000420g0130' => 'nta', 'Nitab4.5_0000422g0030' => 'nta', 'Nitab4.5_0000560g0180' => 'nta', 'Nitab4.5_0000703g0100' => 'nta', 'Nitab4.5_0000786g0200' => 'nta', 'Nitab4.5_0001336g0020' => 'nta', 'Nitab4.5_0001796g0030' => 'nta', 'Nitab4.5_0003348g0060' => 'nta', 'Nitab4.5_0003698g0040' => 'nta', 'Nitab4.5_0003942g0090' => 'nta', 'Nitab4.5_0004775g0070' => 'nta', 'Nitab4.5_0004864g0030' => 'nta', 'Nitab4.5_0005615g0020' => 'nta', 'Nitab4.5_0009288g0030' => 'nta', 'Nitab4.5_0009341g0010' => 'nta', 'Nitab4.5_0009535g0010' => 'nta', 'Nn1g03995' => 'nnu', 'Nn1g04100' => 'nnu', 'Nn1g06530' => 'nnu', 'Nn3g16404' => 'nnu', 'Nn3g17212' => 'nnu', 'Nn3g20776' => 'nnu', 'Nn3g21923' => 'nnu', 'Nn5g27737' => 'nnu', 'Nn5g29461' => 'nnu', 'Nn7g38355' => 'nnu', 'Nn8g39873' => 'nnu', 'Oeu000548.2' => 'oeu', 'Oeu004672.1' => 'oeu', 'Oeu015605.2' => 'oeu', 'Oeu016092.1' => 'oeu', 'Oeu017879.3' => 'oeu', 'Oeu024910.1' => 'oeu', 'Oeu028965.1' => 'oeu', 'Oeu031269.1' => 'oeu', 'Oeu031270.1' => 'oeu', 'Oeu032535.1' => 'oeu', 'Oeu034151.1' => 'oeu', 'Oeu034152.1' => 'oeu', 'Oeu034588.2' => 'oeu', 'Oeu050846.1' => 'oeu', 'Oeu050849.2' => 'oeu', 'Oeu051063.2' => 'oeu', 'Oeu052368.1' => 'oeu', 'Oeu052370.1' => 'oeu', 'Os01g0210400' => 'osa', 'Os01g0304300' => 'osa', 'Os01g0749100' => 'osa', 'Os02g0745800' => 'osa', 'Os03g0769050' => 'osa', 'Os05g0531500' => 'osa', 'Os06g0724300' => 'osa', 'Os11g0198100' => 'osa', 'Peaxi162Scf00069g01425' => 'pax', 'Peaxi162Scf00280g00811' => 'pax', 'Peaxi162Scf00310g00615' => 'pax', 'Peaxi162Scf00362g00542' => 'pax', 'Peaxi162Scf00461g00310' => 'pax', 'Peaxi162Scf00530g00118' => 'pax', 'Peaxi162Scf00541g00057' => 'pax', 'Peaxi162Scf00661g00017' => 'pax', 'Peaxi162Scf00926g00027' => 'pax', 'Peaxi162Scf01064g00263' => 'pax', 'Peaxi162Scf01211g00135' => 'pax', 'PGR004G2336' => 'pgr', 'PGR042G0327' => 'pgr', 'PGR042G1957' => 'pgr', 'PGR042G2003' => 'pgr', 'PGR042G3929' => 'pgr', 'PGR083G1137' => 'pgr', 'PGR083G1364' => 'pgr', 'PGSC0003DMG400003381' => 'stu', 'PGSC0003DMG400003417' => 'stu', 'PGSC0003DMG400008981' => 'stu', 'PGSC0003DMG400012417' => 'stu', 'PGSC0003DMG400012823' => 'stu', 'PGSC0003DMG400016885' => 'stu', 'PGSC0003DMG400022812' => 'stu', 'PGSC0003DMG400029726' => 'stu', 'PGSC0003DMG401009243' => 'stu', 'PGSC0003DMG401031505' => 'stu', 'PGSC0003DMG402031505' => 'stu', 'Phvul.001G017600' => 'pvu', 'Phvul.002G193500' => 'pvu', 'Phvul.002G228900' => 'pvu', 'Phvul.002G236800' => 'pvu', 'Phvul.003G049500' => 'pvu', 'Phvul.005G072000' => 'pvu', 'Phvul.006G164800' => 'pvu', 'Phvul.006G185100' => 'pvu', 'Phvul.007G090000' => 'pvu', 'Potri.001G399800' => 'ptr', 'Potri.002G149900' => 'ptr', 'Potri.004G044100' => 'ptr', 'Potri.004G177600' => 'ptr', 'Potri.009G138000' => 'ptr', 'Potri.010G094000' => 'ptr', 'Potri.011G053000' => 'ptr', 'Potri.011G119300' => 'ptr', 'Potri.013G113700' => 'ptr', 'Potri.018G107800' => 'ptr', 'Potri.019G084100' => 'ptr', 'Pp3c14_23720' => 'ppa', 'Pp3c16_6340' => 'ppa', 'Pp3c23_13420' => 'ppa', 'Pp3c24_2740' => 'ppa', 'Pp3c25_860' => 'ppa', 'Pp3c8_21750' => 'ppa', 'Prupe.1G273000' => 'ppe', 'Prupe.1G273700' => 'ppe', 'Prupe.1G274100' => 'ppe', 'Prupe.2G023300' => 'ppe', 'Prupe.4G048000' => 'ppe', 'Prupe.4G080400' => 'ppe', 'Prupe.4G181200' => 'ppe', 'Prupe.8G056900' => 'ppe', 'Prupe.8G168700' => 'ppe', 'Psat1g189080' => 'psa', 'Psat1g204760' => 'psa', 'Psat4g175560' => 'psa', 'Psat4g177720' => 'psa', 'Psat5g244240' => 'psa', 'Psat6g010720' => 'psa', 'Psat6g187200' => 'psa', 'Psat7g072040' => 'psa', 'PSO017G3501' => 'pso', 'PSO063G2148' => 'pso', 'PSO063G5608' => 'pso', 'PSO210G6392' => 'pso', 'PSO541G2319' => 'pso', 'PSO541G2836' => 'pso', 'PSO541G4012' => 'pso', 'PSO541G6253' => 'pso', 'PSO675G0580' => 'pso', 'PSO675G0856' => 'pso', 'PSO675G5635' => 'pso', 'PSO675G9157' => 'pso', 'PSO832G1660' => 'pso', 'PSO832G1969' => 'pso', 'QL02p007186' => 'qlo', 'QL02p033904' => 'qlo', 'QL03p064391' => 'qlo', 'QL05p040593' => 'qlo', 'QL05p058242' => 'qlo', 'QL08p021825' => 'qlo', 'QL11p004981' => 'qlo', 'RcHm_v2.0_Chr1g0318301' => 'rch', 'RcHm_v2.0_Chr4g0418501' => 'rch', 'RcHm_v2.0_Chr4g0439971' => 'rch', 'RcHm_v2.0_Chr5g0008541' => 'rch', 'RcHm_v2.0_Chr5g0014101' => 'rch', 'RcHm_v2.0_Chr5g0014131' => 'rch', 'RcHm_v2.0_Chr5g0033621' => 'rch', 'RcHm_v2.0_Chr6g0272041' => 'rch', 'RcHm_v2.0_Chr6g0278831' => 'rch', 'Rhsim02G0130400' => 'rsi', 'Rhsim02G0171100' => 'rsi', 'Rhsim05G0053000' => 'rsi', 'Rhsim05G0053100' => 'rsi', 'Rhsim06G0096500' => 'rsi', 'Rhsim06G0096600' => 'rsi', 'Rhsim06G0199100' => 'rsi', 'Rhsim12G0062300' => 'rsi', 'Rhsim12G0062800' => 'rsi', 'Sabra02G0118600' => 'sbr', 'Sabra04G0027300' => 'sbr', 'Sabra04G0119500' => 'sbr', 'Sabra08G0112500' => 'sbr', 'Sabra11G0036800' => 'sbr', 'Sabra11G0103800' => 'sbr', 'Sabra13G0096300' => 'sbr', 'Sabra16G0262300' => 'sbr', 'Sabra18G0091700' => 'sbr', 'Sabra19G0095400' => 'sbr', 'SalBow6G3080' => 'sbo', 'SalBow7G1157' => 'sbo', 'SalBow7G2123' => 'sbo', 'SalBow7G2285' => 'sbo', 'SalBow7G3537' => 'sbo', 'SalBow8G2947' => 'sbo', 'SalBow8G4463' => 'sbo', 'SalBow8G5466' => 'sbo', 'Sc01g0001750' => 'sci', 'Sc02g0006640' => 'sci', 'Sc02g0006670' => 'sci', 'Sc04g0008220' => 'sci', 'Sc05g0006190' => 'sci', 'Sc08g0002760' => 'sci', 'Sc17g0006170' => 'sci', 'Sc22g0002050' => 'sci', 'Sc23g0001190' => 'sci', 'Sc24g0000980' => 'sci', 'Sed0006245' => 'sed', 'Sed0007543' => 'sed', 'Sed0009411' => 'sed', 'Sed0010765' => 'sed', 'Sed0012944' => 'sed', 'Sed0014682' => 'sed', 'Sed0016174' => 'sed', 'Sed0016796' => 'sed', 'Sed0020317' => 'sed', 'Sed0021467' => 'sed', 'SEGI_01316' => 'sgi', 'SEGI_03374' => 'sgi', 'SEGI_16265' => 'sgi', 'SEGI_18569' => 'sgi', 'SEGI_20351' => 'sgi', 'SEGI_26395' => 'sgi', 'SEGI_29469' => 'sgi', 'SEGI_34771' => 'sgi', 'SEGI_36769' => 'sgi', 'SEGI_37139' => 'sgi', 'SGA_v2.0_scaffold100G29687' => 'sas', 'SGA_v2.0_scaffold118G32472' => 'sas', 'SGA_v2.0_scaffold14G07051' => 'sas', 'SGA_v2.0_scaffold183G39845' => 'sas', 'SGA_v2.0_scaffold1G00174' => 'sas', 'SGA_v2.0_scaffold22G09714' => 'sas', 'SGA_v2.0_scaffold333G48992' => 'sas', 'SGA_v2.0_scaffold46G17491' => 'sas', 'SGA_v2.0_scaffold49G18294' => 'sas', 'SGA_v2.0_scaffold63G21658' => 'sas', 'SHI01741' => 'shi', 'SHI05771' => 'shi', 'SHI18077' => 'shi', 'SHI20525' => 'shi', 'SHI20527' => 'shi', 'SHI20528' => 'shi', 'SMO172G0185' => 'smo', 'SMO198G0020' => 'smo', 'SMO351G0006' => 'smo', 'SMO356G0118' => 'smo', 'SMO358G0296' => 'smo', 'SMO367G0079' => 'smo', 'SMO367G1277' => 'smo', 'Solyc01g014220.3' => 'sly', 'Solyc01g111770.2' => 'sly', 'Solyc02g078180.3' => 'sly', 'Solyc03g006430.3' => 'sly', 'Solyc03g006456.1' => 'sly', 'Solyc03g079860.2' => 'sly', 'Solyc04g079770.3' => 'sly', 'Solyc05g007430.4' => 'sly', 'Solyc07g063150.3' => 'sly', 'Solyc08g016620.3' => 'sly', 'Solyc09g057590.3' => 'sly', 'Solyc09g057600.1' => 'sly', 'Solyc10g009050.3' => 'sly', 'Solyc11g017420.2' => 'sly', 'Sopen01g053810' => 'spe', 'Sopen02g023040' => 'spe', 'Sopen03g002440' => 'spe', 'Sopen04g033350' => 'spe', 'Sopen05g003310' => 'spe', 'Sopen07g004050' => 'spe', 'Sopen07g031340' => 'spe', 'Sopen08g006990' => 'spe', 'Sopen10g004830' => 'spe', 'Sopen11g009370' => 'spe', 'Sp1g24450' => 'spa', 'Sp1g29670' => 'spa', 'Sp1g39600' => 'spa', 'Sp2g11080' => 'spa', 'Sp2g13970' => 'spa', 'Sp4g16130' => 'spa', 'Sp6g13080' => 'spa', 'Sp7g37270' => 'spa', 'TAR371G0065' => 'tar', 'TAR376G0340' => 'tar', 'TAR376G0435' => 'tar', 'TAR381G0002' => 'tar', 'TAR381G1236' => 'tar', 'TAR624G0055' => 'tar', 'TAR624G0324' => 'tar', 'TAR624G0696' => 'tar', 'TAR624G0906' => 'tar', 'TAR625G0107' => 'tar', 'TAR626G0015' => 'tar', 'TAR626G1356' => 'tar', 'TAR627G0888' => 'tar', 'TAR628G0399' => 'tar', 'TAR628G1327' => 'tar', 'TAR629G2831' => 'tar', 'TAR629G2874' => 'tar', 'TAR633G1432' => 'tar', 'TAR633G2771' => 'tar', 'THA.LOC104803394' => 'tha', 'THA.LOC104805153' => 'tha', 'THA.LOC104806784' => 'tha', 'THA.LOC104810473' => 'tha', 'THA.LOC104813100' => 'tha', 'THA.LOC104814215' => 'tha', 'THA.LOC104815554' => 'tha', 'THA.LOC104820544' => 'tha', 'THA.LOC104824754' => 'tha', 'THA.LOC104827717' => 'tha', 'Thecc.02G031400' => 'tca', 'Thecc.02G055900' => 'tca', 'Thecc.02G350800' => 'tca', 'Thecc.06G150900' => 'tca', 'Thecc.06G186600' => 'tca', 'Thecc.07G089600' => 'tca', 'Thecc.08G020400' => 'tca', 'Thecc.08G182100' => 'tca', 'Thhalv10000873m.g' => 'esa', 'Thhalv10004185m.g' => 'esa', 'Thhalv10006981m.g' => 'esa', 'Thhalv10007204m.g' => 'esa', 'Thhalv10011374m.g' => 'esa', 'Thhalv10013482m.g' => 'esa', 'Thhalv10017801m.g' => 'esa', 'Thhalv10024983m.g' => 'esa', 'TPR.G12072' => 'tpr', 'TPR.G15769' => 'tpr', 'TPR.G16504' => 'tpr', 'TPR.G16506' => 'tpr', 'TPR.G24345' => 'tpr', 'TPR.G26666' => 'tpr', 'TPR.G27320' => 'tpr', 'TPR.G31819' => 'tpr', 'TPR.G38879' => 'tpr', 'TPR.G39015' => 'tpr', 'TPR.G8819' => 'tpr', 'TWI09G0924' => 'twi', 'TWI12G0811' => 'twi', 'TWI12G1294' => 'twi', 'TWI31G0150' => 'twi', 'TWI36G1262' => 'twi', 'TWI38G1287' => 'twi', 'TWI38G1633' => 'twi', 'TWI38G1982' => 'twi', 'TWI39G0116' => 'twi', 'TWI60G1011' => 'twi', 'TWI63G0171' => 'twi', 'TWI73G0839' => 'twi', 'TWI79G1511' => 'twi', 'unitig_0.g915' => 'ugi', 'unitig_0.g916' => 'ugi', 'unitig_21.g20219' => 'ugi', 'unitig_21.g20416' => 'ugi', 'unitig_578.g16132' => 'ugi', 'unitig_578.g16718' => 'ugi', 'unitig_62.g23481' => 'ugi', 'unitig_744.g24535' => 'ugi', 'unitig_749.g13525' => 'ugi', 'vmacro01248' => 'vma', 'vmacro02290' => 'vma', 'vmacro10946' => 'vma', 'vmacro11865' => 'vma', 'vmacro12493' => 'vma', 'vmacro17322' => 'vma', 'vmacro21599' => 'vma', 'vmacro23041' => 'vma', 'VMungo0251G0004' => 'vmu', 'VMungo0251G2639' => 'vmu', 'VMungo0251G2967' => 'vmu', 'VMungo0540G0864' => 'vmu', 'VMungo0540G1569' => 'vmu', 'VMungo0647G0317' => 'vmu', 'VMungo0720G1373' => 'vmu', 'VMungo0720G1508' => 'vmu', 'VMungo1080G0485' => 'vmu', 'VMungo1215G3177' => 'vmu', 'Zm00001eb112600' => 'zma', 'Zm00001eb120220' => 'zma', 'Zm00001eb153240' => 'zma', 'Zm00001eb168880' => 'zma', 'Zm00001eb213920' => 'zma', 'Zm00001eb228280' => 'zma', 'Zm00001eb254580' => 'zma', 'Zm00001eb272180' => 'zma', 'Zm00001eb293190' => 'zma', 'Zm00001eb322930' => 'zma', 'Zm00001eb353360' => 'zma', 'Zm00001eb353390' => 'zma', 'Zm00001eb353430' => 'zma', 'Zm00001eb353440' => 'zma', 'Zm00001eb353780' => 'zma' ) $gf_id = 'HOM05D000499' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000499' ) $data_identifier = 'HOM05D000499' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 29, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 12, 'amhyb' => (int) 8, 'aly' => (int) 12, 'aox' => (int) 9, 'arhy' => (int) 26, 'ath' => (int) 8, 'atr' => (int) 7, 'acertr' => (int) 10, 'cqu' => (int) 15, 'bca' => (int) 29, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 11, 'cansat' => (int) 8, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 9, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 8, 'cpa' => (int) 10, 'csa' => (int) 7, 'camsi' => (int) 20, 'dca' => (int) 8, 'din' => (int) 12, 'dzi' => (int) 14, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 6, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 38, 'gra' => (int) 16, 'vvi' => (int) 8, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 5, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 11, 'lja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 11, 'mpo' => (int) 3, 'mbi' => (int) 14, 'mdo' => (int) 14, 'mtr' => (int) 8, 'cme' => (int) 9, 'egut' => (int) 9, 'ama' => (int) 11, 'nta' => (int) 17, 'nnu' => (int) 11, 'oeu' => (int) 18, 'osa' => (int) 8, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 6, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 9, 'rsi' => (int) 9, 'sbr' => (int) 10, 'sbo' => (int) 8, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 10, 'sas' => (int) 10, 'shi' => (int) 6, 'smo' => (int) 7, 'sly' => (int) 14, 'spe' => (int) 10, 'spa' => (int) 8, 'tar' => (int) 19, 'tha' => (int) 10, 'tca' => (int) 8, 'esa' => (int) 8, 'tpr' => (int) 11, 'twi' => (int) 13, 'ugi' => (int) 9, 'vma' => (int) 8, 'vmu' => (int) 10, 'zma' => (int) 15 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb353780' $species_info = array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ) $local_species = 'dzi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000499', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1066', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p29780' => 'bna', 'A02p33180' => 'bna', 'A03p16470' => 'bna', 'A03p66010' => 'bna', 'A04p25970' => 'bna', 'A06p01270' => 'bna', 'A06p46080' => 'bna', 'A07p11400' => 'bna', 'A08p01840' => 'bna', 'A08p08230' => 'bna', 'A08p25740' => 'bna', 'A09p32070' => 'bna', 'A09p37830' => 'bna', 'A09p42840' => 'bna', 'A09p42850' => 'bna', 'Aa31LG10G2060' => 'aar', 'Aa31LG2G7410' => 'aar', 'Aa31LG6G10200' => 'aar', 'Aa31LG6G16680' => 'aar', 'Aa31LG6G8470' => 'aar', 'Aa31LG9G12730' => 'aar', 'Aa31LG9G13680' => 'aar', 'Aa31LG9G14920' => 'aar', 'Aa31LG9G6650' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4977' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5467' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3254' => 'aag', 'Actinidia02578' => 'ach', 'Actinidia07693' => 'ach', 'Actinidia08413' => 'ach', 'Actinidia08414' => 'ach', 'Actinidia15289' => 'ach', 'Actinidia19871' => 'ach', 'Actinidia21475' => 'ach', 'Actinidia22576' => 'ach', 'Actinidia28327' => 'ach', 'Actinidia32491' => 'ach', 'Actinidia39463' => 'ach', 'Actinidia39571' => 'ach', 'Ah.01g013750' => 'amhyb', 'Ah.01g023210' => 'amhyb', 'Ah.04g164850' => 'amhyb', 'Ah.05g178060' => 'amhyb', 'Ah.07g204270' => 'amhyb', 'Ah.07g208480' => 'amhyb', 'Ah.09g237410' => 'amhyb', 'Ah.14g089460' => 'amhyb', 'AL1G41790' => 'aly', 'AL1G49050' => 'aly', 'AL1G53810' => 'aly', 'AL1G61400' => 'aly', 'AL4G18580' => 'aly', 'AL5G12510' => 'aly', 'AL5G12540' => 'aly', 'AL6G43230' => 'aly', 'AL7G10370' => 'aly', 'AL7G19250' => 'aly', 'AL8G12240' => 'aly', 'AL8G18540' => 'aly', 'Aqoxy1G02409' => 'aox', 'Aqoxy2G03993' => 'aox', 'Aqoxy3G03357' => 'aox', 'Aqoxy4G00785' => 'aox', 'Aqoxy5G02598' => 'aox', 'Aqoxy6G00132' => 'aox', 'Aqoxy7G01776' => 'aox', 'Aqoxy7G02316' => 'aox', 'Aqoxy7G03973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.12AFKW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B8730' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27IQR1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3F75VG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3RE0GA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41TCQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.527VTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FIR39' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5W8UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DA38EV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ63HS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H1I32C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HC27T5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4M8AP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7N3CZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9UVDZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LS1NQA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT1D4B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SKC4TM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCFV76' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF9Q1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQWD9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1ZM88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WE07RT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YCK7VH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJE6Q6' => 'arhy', 'AT1G28240' => 'ath', 'AT1G34550' => 'ath', 'AT1G53040' => 'ath', 'AT2G02910' => 'ath', 'AT4G09630' => 'ath', 'AT4G38500' => 'ath', 'AT5G42660' => 'ath', 'AT5G46220' => 'ath', 'ATR0152G026' => 'atr', 'ATR0564G343' => 'atr', 'ATR0706G151' => 'atr', 'ATR0733G207' => 'atr', 'ATR0751G234' => 'atr', 'ATR0807G048' => 'atr', 'ATR1091G084' => 'atr', 'Atru.chr10.1229' => 'acertr', 'Atru.chr10.1230' => 'acertr', 'Atru.chr10.1874' => 'acertr', 'Atru.chr11.1808' => 'acertr', 'Atru.chr13.1795' => 'acertr', 'Atru.chr13.570' => 'acertr', 'Atru.chr2.2608' => 'acertr', 'Atru.chr2.2609' => 'acertr', 'Atru.chr5.3428' => 'acertr', 'Atru.chr8.1171' => 'acertr', 'AUR62004651' => 'cqu', 'AUR62008675' => 'cqu', 'AUR62010014' => 'cqu', 'AUR62013004' => 'cqu', 'AUR62014825' => 'cqu', 'AUR62015015' => 'cqu', 'AUR62015151' => 'cqu', 'AUR62017020' => 'cqu', 'AUR62019422' => 'cqu', 'AUR62023570' => 'cqu', 'AUR62025571' => 'cqu', 'AUR62029098' => 'cqu', 'AUR62033863' => 'cqu', 'AUR62034296' => 'cqu', 'AUR62040075' => 'cqu', 'BcaB02g07334' => 'bca', 'BcaB02g10575' => 'bca', 'BcaB03g12119' => 'bca', 'BcaB03g12120' => 'bca', 'BcaB03g13945' => 'bca', 'BcaB04g17123' => 'bca', 'BcaB04g17867' => 'bca', 'BcaB04g19839' => 'bca', 'BcaB07g30317' => 'bca', 'BcaB07g32432' => 'bca', 'BcaB07g33362' => 'bca', 'BcaB08g36611' => 'bca', 'BcaC01g00028' => 'bca', 'BcaC01g01356' => 'bca', 'BcaC01g02034' => 'bca', 'BcaC01g06051' => 'bca', 'BcaC03g16839' => 'bca', 'BcaC03g17176' => 'bca', 'BcaC05g26829' => 'bca', 'BcaC06g31490' => 'bca', 'BcaC06g35344' => 'bca', 'BcaC06g36570' => 'bca', 'BcaC07g37537' => 'bca', 'BcaC08g43491' => 'bca', 'BcaC08g43773' => 'bca', 'BcaNung00234' => 'bca', 'BcaNung01982' => 'bca', 'BcaNung03707' => 'bca', 'BcaNung06454' => 'bca', 'BolC2t10762H' => 'bol', 'BolC2t11191H' => 'bol', 'BolC3t14322H' => 'bol', 'BolC3t19747H' => 'bol', 'BolC3t21425H' => 'bol', 'BolC4t27800H' => 'bol', 'BolC5t31423H' => 'bol', 'BolC6t35951H' => 'bol', 'BolC6t36282H' => 'bol', 'BolC7t40678H' => 'bol', 'BolC7t40679H' => 'bol', 'BolC7t42222H' => 'bol', 'BolC7t43492H' => 'bol', 'BolC7t46785H' => 'bol', 'BolC8t47853H' => 'bol', 'BolC9t56805H' => 'bol', 'BraA02t08000Z' => 'bra', 'BraA02t08341Z' => 'bra', 'BraA03t10936Z' => 'bra', 'BraA03t15657Z' => 'bra', 'BraA04t18100Z' => 'bra', 'BraA05t20523Z' => 'bra', 'BraA06t23353Z' => 'bra', 'BraA06t27473Z' => 'bra', 'BraA06t27769Z' => 'bra', 'BraA07t28928Z' => 'bra', 'BraA08t32236Z' => 'bra', 'BraA08t32841Z' => 'bra', 'BraA08t34524Z' => 'bra', 'BraA09t38742Z' => 'bra', 'BraA09t39295Z' => 'bra', 'C02p47180' => 'bna', 'C02p50990' => 'bna', 'C03p19360' => 'bna', 'C03p74950' => 'bna', 'C03p91000' => 'bna', 'C04p63260' => 'bna', 'C05p27050' => 'bna', 'C06p08750' => 'bna', 'C06p11490' => 'bna', 'C07p02820' => 'bna', 'C07p17180' => 'bna', 'C07p29440' => 'bna', 'C07p63730' => 'bna', 'C09p39260' => 'bna', 'CAN.G1164.34' => 'can', 'CAN.G1164.39' => 'can', 'CAN.G1530.3' => 'can', 'CAN.G162.61' => 'can', 'CAN.G176.6' => 'can', 'CAN.G289.49' => 'can', 'CAN.G370.21' => 'can', 'CAN.G370.22' => 'can', 'CAN.G371.117' => 'can', 'CAN.G58.37' => 'can', 'CAN.G588.98' => 'can', 'CANSAT21G2266' => 'cansat', 'CANSAT25G2799' => 'cansat', 'CANSAT35G0862' => 'cansat', 'CANSAT35G1704' => 'cansat', 'CANSAT35G1760' => 'cansat', 'CANSAT56G3971' => 'cansat', 'CANSAT56G4116' => 'cansat', 'CANSAT80G1259' => 'cansat', 'CARHR027730' => 'chi', 'CARHR033880' => 'chi', 'CARHR043270' => 'chi', 'CARHR145330' => 'chi', 'CARHR145340' => 'chi', 'CARHR175570' => 'chi', 'CARHR181570' => 'chi', 'CARHR258470' => 'chi', 'CARHR260490' => 'chi', 'CARHR294220' => 'chi', 'Carub.0001s2668' => 'cru', 'Carub.0001s3257' => 'cru', 'Carub.0001s4220' => 'cru', 'Carub.0005s0179' => 'cru', 'Carub.0006s2807' => 'cru', 'Carub.0007s0039' => 'cru', 'Carub.0008s0169' => 'cru', 'Carub.0008s0636' => 'cru', 'Ca_00338_v3' => 'car', 'Ca_00542_v3' => 'car', 'Ca_01844_v3' => 'car', 'Ca_10611_v3' => 'car', 'Ca_13326_v3' => 'car', 'Ca_17944_v3' => 'car', 'Ca_18546_v3' => 'car', 'Ca_24219_v3' => 'car', 'Ca_29972_v3' => 'car', 'CBR_g3681' => 'cbr', 'CBR_g40021' => 'cbr', 'Cc01_g08140' => 'ccan', 'Cc02_g13410' => 'ccan', 'Cc02_g37480' => 'ccan', 'Cc05_g12030' => 'ccan', 'Cc09_g03370' => 'ccan', 'Cc09_g10300' => 'ccan', 'Cc10_g03530' => 'ccan', 'Cc10_g11380' => 'ccan', 'CDE01G0176' => 'cde', 'CDE02G0675' => 'cde', 'CDE02G0942' => 'cde', 'CDE02G1153' => 'cde', 'CDE02G4177' => 'cde', 'CDE04G2117' => 'cde', 'CDE04G2736' => 'cde', 'CDE08G1161' => 'cde', 'CDE09G1238' => 'cde', 'Cfa000467' => 'cfa', 'Cfa000947' => 'cfa', 'Cfa004969' => 'cfa', 'Cfa005284' => 'cfa', 'Cfa008993' => 'cfa', 'Cfa018187' => 'cfa', 'Cfa018454' => 'cfa', 'Cfa020585' => 'cfa', 'Ciclev10000424m.g' => 'ccl', 'Ciclev10003605m.g' => 'ccl', 'Ciclev10007828m.g' => 'ccl', 'Ciclev10014620m.g' => 'ccl', 'Ciclev10015169m.g' => 'ccl', 'Ciclev10018291m.g' => 'ccl', 'Ciclev10028256m.g' => 'ccl', 'Ciclev10033822m.g' => 'ccl', 'CiPaw.05G060300' => 'cil', 'CiPaw.05G085000' => 'cil', 'CiPaw.06G083700' => 'cil', 'CiPaw.06G120300' => 'cil', 'CiPaw.09G060500' => 'cil', 'CiPaw.09G123800' => 'cil', 'CiPaw.11G169700' => 'cil', 'CiPaw.12G118300' => 'cil', 'CiPaw.15G071000' => 'cil', 'CiPaw.15G081900' => 'cil', 'ClCG01G024610' => 'cla', 'ClCG03G006070' => 'cla', 'ClCG05G019250' => 'cla', 'ClCG09G009500' => 'cla', 'ClCG11G008200' => 'cla', 'ClCG11G018080' => 'cla', 'COL.COLO4_17373' => 'col', 'COL.COLO4_22994' => 'col', 'COL.COLO4_26389' => 'col', 'COL.COLO4_27170' => 'col', 'COL.COLO4_31074' => 'col', 'COL.COLO4_31465' => 'col', 'COL.COLO4_36438' => 'col', 'COL.COLO4_36439' => 'col', 'Cpa.g.c38781' => 'cpa', 'Cpa.g.sc128.12' => 'cpa', 'Cpa.g.sc166.7' => 'cpa', 'Cpa.g.sc166.8' => 'cpa', 'Cpa.g.sc20.111' => 'cpa', 'Cpa.g.sc27.31' => 'cpa', 'Cpa.g.sc64.36' => 'cpa', 'Cpa.g.sc64.37' => 'cpa', 'Cpa.g.sc66.49' => 'cpa', 'Cpa.g.sc80.64' => 'cpa', 'CsaV3_1G012320' => 'csa', 'CsaV3_2G008480' => 'csa', 'CsaV3_2G033450' => 'csa', 'CsaV3_3G044830' => 'csa', 'CsaV3_4G033710' => 'csa', 'CsaV3_6G051730' => 'csa', 'CsaV3_7G025350' => 'csa', 'CSS0001067' => 'camsi', 'CSS0005996' => 'camsi', 'CSS0006590' => 'camsi', 'CSS0009673' => 'camsi', 'CSS0010201' => 'camsi', 'CSS0010549' => 'camsi', 'CSS0011364' => 'camsi', 'CSS0014473' => 'camsi', 'CSS0014961' => 'camsi', 'CSS0020191' => 'camsi', 'CSS0021165' => 'camsi', 'CSS0022306' => 'camsi', 'CSS0030591' => 'camsi', 'CSS0030696' => 'camsi', 'CSS0032653' => 'camsi', 'CSS0037487' => 'camsi', 'CSS0041102' => 'camsi', 'CSS0041261' => 'camsi', 'CSS0046246' => 'camsi', 'CSS0049256' => 'camsi', 'DCAR_004075' => 'dca', 'DCAR_011538' => 'dca', 'DCAR_019553' => 'dca', 'DCAR_020952' => 'dca', 'DCAR_021739' => 'dca', 'DCAR_027407' => 'dca', 'DCAR_027913' => 'dca', 'DCAR_028066' => 'dca', 'Dinv05899' => 'din', 'Dinv07563' => 'din', 'Dinv08010' => 'din', 'Dinv14125' => 'din', 'Dinv20172' => 'din', 'Dinv30743' => 'din', 'Dinv31229' => 'din', 'Dinv34162' => 'din', 'Dinv36028' => 'din', 'Dinv39368' => 'din', 'Dinv40565' => 'din', 'Dinv41706' => 'din', 'Duzib052G0089' => 'dzi', 'Duzib116G0641' => 'dzi', 'Duzib132G0069' => 'dzi', 'Duzib132G1219' => 'dzi', 'Duzib147G0278' => 'dzi', 'Duzib160G0480' => 'dzi', 'Duzib170G0661' => 'dzi', 'Duzib177G0591' => 'dzi', 'Duzib187G1353' => 'dzi', 'Duzib192G0858' => 'dzi', 'Duzib192G0883' => 'dzi', 'Duzib213G0506' => 'dzi', 'Duzib235G0289' => 'dzi', 'Duzib251G0422' => 'dzi', 'ECA232G3898' => 'eca', 'ECA233G5950' => 'eca', 'ECA234G1699' => 'eca', 'ECA234G2421' => 'eca', 'ECA236G0426' => 'eca', 'ECA236G4331' => 'eca', 'ECA248G2573' => 'eca', 'EL10Ac1g00077' => 'bvu', 'EL10Ac1g01746' => 'bvu', 'EL10Ac2g03464' => 'bvu', 'EL10Ac4g08176' => 'bvu', 'EL10Ac7g17521' => 'bvu', 'EL10Ac8g20386' => 'bvu', 'EL10Ac9g21343' => 'bvu', 'EL10Ac9g22688' => 'bvu', 'Eucgr.B03434' => 'egr', 'Eucgr.D00618' => 'egr', 'Eucgr.E02395' => 'egr', 'Eucgr.F01129' => 'egr', 'Eucgr.F02622' => 'egr', 'Eucgr.F04207' => 'egr', 'FAN01G0570' => 'fan', 'FAN03G3351' => 'fan', 'FAN06G3702' => 'fan', 'FAN07G2149' => 'fan', 'FAN10G3758' => 'fan', 'FAN11G1170' => 'fan', 'FAN11G2050' => 'fan', 'FAN11G2724' => 'fan', 'FAN12G1700' => 'fan', 'FAN12G2028' => 'fan', 'FAN15G1160' => 'fan', 'FAN15G3063' => 'fan', 'FAN16G2540' => 'fan', 'FAN16G3077' => 'fan', 'FAN16G3624' => 'fan', 'FAN17G0221' => 'fan', 'FAN20G2492' => 'fan', 'FAN20G2905' => 'fan', 'FAN21G0548' => 'fan', 'FAN21G1300' => 'fan', 'FAN22G0077' => 'fan', 'FAN22G1315' => 'fan', 'FAN24G1280' => 'fan', 'FAN24G1445' => 'fan', 'FAN24G3527' => 'fan', 'FAN25G0464' => 'fan', 'FAN25G2885' => 'fan', 'FAN25G3270' => 'fan', 'FAN27G1101' => 'fan', 'FAN27G2846' => 'fan', 'FAN27G3524' => 'fan', 'FvH4_2g11770' => 'fve', 'FvH4_2g15630' => 'fve', 'FvH4_3g05570' => 'fve', 'FvH4_3g09110' => 'fve', 'FvH4_3g19940' => 'fve', 'FvH4_4g04821' => 'fve', 'FvH4_4g31480' => 'fve', 'FvH4_7g01740' => 'fve', 'Glyma.05G130400' => 'gma', 'Glyma.05G156400' => 'gma', 'Glyma.07G197000' => 'gma', 'Glyma.08G085151' => 'gma', 'Glyma.08G114500' => 'gma', 'Glyma.08G300400' => 'gma', 'Glyma.10G215800' => 'gma', 'Glyma.12G224400' => 'gma', 'Glyma.13G179300' => 'gma', 'Glyma.13G218151' => 'gma', 'Glyma.13G238800' => 'gma', 'Glyma.13G276900' => 'gma', 'Glyma.14G078200' => 'gma', 'Glyma.15G074500' => 'gma', 'Glyma.15G094100' => 'gma', 'Glyma.17G247200' => 'gma', 'Glyma.18G120100' => 'gma', 'Glyma.20G176000' => 'gma', 'Gohir.A01G063600' => 'ghi', 'Gohir.A01G170301' => 'ghi', 'Gohir.A02G060500' => 'ghi', 'Gohir.A05G133850' => 'ghi', 'Gohir.A05G161400' => 'ghi', 'Gohir.A06G012900' => 'ghi', 'Gohir.A06G035901' => 'ghi', 'Gohir.A06G127100' => 'ghi', 'Gohir.A06G210500' => 'ghi', 'Gohir.A08G008650' => 'ghi', 'Gohir.A09G072700' => 'ghi', 'Gohir.A09G088301' => 'ghi', 'Gohir.A10G040600' => 'ghi', 'Gohir.A12G036300' => 'ghi', 'Gohir.A12G143350' => 'ghi', 'Gohir.A12G165500' => 'ghi', 'Gohir.A13G145700' => 'ghi', 'Gohir.D01G050000' => 'ghi', 'Gohir.D01G051366' => 'ghi', 'Gohir.D01G161350' => 'ghi', 'Gohir.D02G065900' => 'ghi', 'Gohir.D05G164200' => 'ghi', 'Gohir.D05G355500' => 'ghi', 'Gohir.D06G010400' => 'ghi', 'Gohir.D06G111250' => 'ghi', 'Gohir.D06G132000' => 'ghi', 'Gohir.D06G210500' => 'ghi', 'Gohir.D07G165675' => 'ghi', 'Gohir.D08G062240' => 'ghi', 'Gohir.D08G086101' => 'ghi', 'Gohir.D08G138060' => 'ghi', 'Gohir.D09G072300' => 'ghi', 'Gohir.D10G041400' => 'ghi', 'Gohir.D11G191020' => 'ghi', 'Gohir.D11G212066' => 'ghi', 'Gohir.D12G036300' => 'ghi', 'Gohir.D12G168600' => 'ghi', 'Gohir.D13G150600' => 'ghi', 'Gorai.001G057300' => 'gra', 'Gorai.002G069900' => 'gra', 'Gorai.002G200000' => 'gra', 'Gorai.003G067600' => 'gra', 'Gorai.005G074800' => 'gra', 'Gorai.006G087300' => 'gra', 'Gorai.008G037500' => 'gra', 'Gorai.008G181400' => 'gra', 'Gorai.009G169400' => 'gra', 'Gorai.009G387900' => 'gra', 'Gorai.010G013300' => 'gra', 'Gorai.010G153800' => 'gra', 'Gorai.010G255800' => 'gra', 'Gorai.011G043700' => 'gra', 'Gorai.011G198900' => 'gra', 'Gorai.013G168400' => 'gra', 'GSVIVG01005212001' => 'vvi', 'GSVIVG01006163001' => 'vvi', 'GSVIVG01009625001' => 'vvi', 'GSVIVG01014338001' => 'vvi', 'GSVIVG01020005001' => 'vvi', 'GSVIVG01021450001' => 'vvi', 'GSVIVG01023975001' => 'vvi', 'GSVIVG01034490001' => 'vvi', 'HanXRQChr04g0112071' => 'han', 'HanXRQChr05g0131151' => 'han', 'HanXRQChr09g0262371' => 'han', 'HanXRQChr09g0268401' => 'han', 'HanXRQChr10g0279241' => 'han', 'HanXRQChr10g0297961' => 'han', 'HanXRQChr11g0326231' => 'han', 'HanXRQChr11g0328471' => 'han', 'HanXRQChr16g0507941' => 'han', 'HanXRQChr17g0560211' => 'han', 'Haze_02108' => 'cav', 'Haze_02428' => 'cav', 'Haze_05593' => 'cav', 'Haze_06448' => 'cav', 'Haze_09427' => 'cav', 'Haze_12022' => 'cav', 'Haze_17612' => 'cav', 'Haze_17928' => 'cav', 'Hma1.2p1_0032F.1_g019250' => 'hma', 'Hma1.2p1_0163F.1_g072690' => 'hma', 'Hma1.2p1_0265F.1_g106710' => 'hma', 'Hma1.2p1_0286F.1_g113970' => 'hma', 'Hma1.2p1_0363F.1_g136640' => 'hma', 'Hma1.2p1_0584F.1_g183470' => 'hma', 'Hma1.2p1_0885F.1_g232570' => 'hma', 'HPP92_006022' => 'vpl', 'HPP92_007320' => 'vpl', 'HPP92_011521' => 'vpl', 'HPP92_019387' => 'vpl', 'HPP92_024038' => 'vpl', 'Hund05891' => 'sun', 'Hund06450' => 'sun', 'Hund12053' => 'sun', 'Hund16800' => 'sun', 'Hund21222' => 'sun', 'Hund22896' => 'sun', 'Hund23746' => 'sun', 'Hund27083' => 'sun', 'Lalb_Chr02g0141831' => 'lal', 'Lalb_Chr02g0141841' => 'lal', 'Lalb_Chr05g0220411' => 'lal', 'Lalb_Chr06g0162081' => 'lal', 'Lalb_Chr09g0327651' => 'lal', 'Lalb_Chr13g0295051' => 'lal', 'Lalb_Chr15g0086801' => 'lal', 'Lalb_Chr16g0383781' => 'lal', 'Lalb_Chr16g0383791' => 'lal', 'Lalb_Chr18g0055441' => 'lal', 'Lalb_Chr18g0059611' => 'lal', 'Lalb_Chr20g0109661' => 'lal', 'Lalb_Chr20g0109831' => 'lal', 'Lalb_Chr20g0121871' => 'lal', 'Lalb_Chr22g0355361' => 'lal', 'Lalb_Chr25g0286371' => 'lal', 'Lj1A1187G43' => 'lonja', 'Lj1A1205T50' => 'lonja', 'Lj1A800G33' => 'lonja', 'Lj1C1187T7' => 'lonja', 'Lj1C843T11' => 'lonja', 'Lj1g0010940' => 'lja', 'Lj2A288T69' => 'lonja', 'Lj3g0024276' => 'lja', 'Lj4A47T76' => 'lonja', 'Lj4g0005805' => 'lja', 'Lj4g0006097' => 'lja', 'Lj4g0008528' => 'lja', 'Lj4g0024907' => 'lja', 'Lj5g0012472' => 'lja', 'Lj5g0018648' => 'lja', 'Lj6C789G1' => 'lonja', 'Lj6g0004000' => 'lja', 'Lj7A292G67' => 'lonja', 'Lj7A292T64' => 'lonja', 'Lj9A400T58' => 'lonja', 'Lsat_1_v5_gn_1_126181' => 'lsa', 'Lsat_1_v5_gn_4_123041' => 'lsa', 'Lsat_1_v5_gn_4_133620' => 'lsa', 'Lsat_1_v5_gn_4_53221' => 'lsa', 'Lsat_1_v5_gn_4_71961' => 'lsa', 'Lsat_1_v5_gn_7_105241' => 'lsa', 'Lsat_1_v5_gn_7_21361' => 'lsa', 'Lsat_1_v5_gn_7_28860' => 'lsa', 'Lsat_1_v5_gn_7_31260' => 'lsa', 'Lsat_1_v5_gn_8_52801' => 'lsa', 'Manes.02G191400' => 'mes', 'Manes.03G110100' => 'mes', 'Manes.04G071100' => 'mes', 'Manes.05G100500' => 'mes', 'Manes.05G164700' => 'mes', 'Manes.15G087000' => 'mes', 'Manes.15G121500' => 'mes', 'Manes.16G028300' => 'mes', 'Manes.17G046100' => 'mes', 'Manes.17G069800' => 'mes', 'Manes.18G100500' => 'mes', 'Mapoly0002s0109' => 'mpo', 'Mapoly0024s0007' => 'mpo', 'Mapoly0089s0032' => 'mpo', 'MBI04_g42241_MAGBIO' => 'mbi', 'MBI05_g11988_MAGBIO' => 'mbi', 'MBI05_g35452_MAGBIO' => 'mbi', 'MBI07_g30179_MAGBIO' => 'mbi', 'MBI07_g35859_MAGBIO' => 'mbi', 'MBI07_g35860_MAGBIO' => 'mbi', 'MBI07_g37166_MAGBIO' => 'mbi', 'MBI08_g18172_MAGBIO' => 'mbi', 'MBI09_g08441_MAGBIO' => 'mbi', 'MBI13_g01676_MAGBIO' => 'mbi', 'MBI14_g42955_MAGBIO' => 'mbi', 'MBI16_g13161_MAGBIO' => 'mbi', 'MBI17_g27204_MAGBIO' => 'mbi', 'MBI19_g21595_MAGBIO' => 'mbi', 'MD00G1148400' => 'mdo', 'MD02G1301200' => 'mdo', 'MD03G1227800' => 'mdo', 'MD05G1041100' => 'mdo', 'MD05G1124800' => 'mdo', 'MD05G1284000' => 'mdo', 'MD05G1338800' => 'mdo', 'MD05G1338900' => 'mdo', 'MD07G1022800' => 'mdo', 'MD10G1047500' => 'mdo', 'MD10G1127500' => 'mdo', 'MD10G1262300' => 'mdo', 'MD10G1293800' => 'mdo', 'MD16G1074300' => 'mdo', 'Medtr1g021670' => 'mtr', 'Medtr1g096320' => 'mtr', 'Medtr2g013690' => 'mtr', 'Medtr2g019450' => 'mtr', 'Medtr2g085170' => 'mtr', 'Medtr4g088785' => 'mtr', 'Medtr8g055930' => 'mtr', 'Medtr8g085850' => 'mtr', 'MELO3C002605.2' => 'cme', 'MELO3C003891.2' => 'cme', 'MELO3C004012.2' => 'cme', 'MELO3C007134.2' => 'cme', 'MELO3C008118.2' => 'cme', 'MELO3C016700.2' => 'cme', 'MELO3C024127.2' => 'cme', 'MELO3C033361.2' => 'cme', 'MELO3C033362.2' => 'cme', 'Migut.C00430' => 'egut', 'Migut.C01246' => 'egut', 'Migut.E00101' => 'egut', 'Migut.H01486' => 'egut', 'Migut.H01939' => 'egut', 'Migut.K00360' => 'egut', 'Migut.M00910' => 'egut', 'Migut.M01139' => 'egut', 'Migut.N02677' => 'egut', 'MSTRG.13252' => 'ama', 'MSTRG.14701' => 'ama', 'MSTRG.1521' => 'ama', 'MSTRG.15884' => 'ama', 'MSTRG.16242' => 'ama', 'MSTRG.22285' => 'ama', 'MSTRG.22444' => 'ama', 'MSTRG.2349' => 'ama', 'MSTRG.26308' => 'ama', 'MSTRG.28296' => 'ama', 'MSTRG.9895' => 'ama', 'Nitab4.5_0000110g0060' => 'nta', 'Nitab4.5_0000420g0130' => 'nta', 'Nitab4.5_0000422g0030' => 'nta', 'Nitab4.5_0000560g0180' => 'nta', 'Nitab4.5_0000703g0100' => 'nta', 'Nitab4.5_0000786g0200' => 'nta', 'Nitab4.5_0001336g0020' => 'nta', 'Nitab4.5_0001796g0030' => 'nta', 'Nitab4.5_0003348g0060' => 'nta', 'Nitab4.5_0003698g0040' => 'nta', 'Nitab4.5_0003942g0090' => 'nta', 'Nitab4.5_0004775g0070' => 'nta', 'Nitab4.5_0004864g0030' => 'nta', 'Nitab4.5_0005615g0020' => 'nta', 'Nitab4.5_0009288g0030' => 'nta', 'Nitab4.5_0009341g0010' => 'nta', 'Nitab4.5_0009535g0010' => 'nta', 'Nn1g03995' => 'nnu', 'Nn1g04100' => 'nnu', 'Nn1g06530' => 'nnu', 'Nn3g16404' => 'nnu', 'Nn3g17212' => 'nnu', 'Nn3g20776' => 'nnu', 'Nn3g21923' => 'nnu', 'Nn5g27737' => 'nnu', 'Nn5g29461' => 'nnu', 'Nn7g38355' => 'nnu', 'Nn8g39873' => 'nnu', 'Oeu000548.2' => 'oeu', 'Oeu004672.1' => 'oeu', 'Oeu015605.2' => 'oeu', 'Oeu016092.1' => 'oeu', 'Oeu017879.3' => 'oeu', 'Oeu024910.1' => 'oeu', 'Oeu028965.1' => 'oeu', 'Oeu031269.1' => 'oeu', 'Oeu031270.1' => 'oeu', 'Oeu032535.1' => 'oeu', 'Oeu034151.1' => 'oeu', 'Oeu034152.1' => 'oeu', 'Oeu034588.2' => 'oeu', 'Oeu050846.1' => 'oeu', 'Oeu050849.2' => 'oeu', 'Oeu051063.2' => 'oeu', 'Oeu052368.1' => 'oeu', 'Oeu052370.1' => 'oeu', 'Os01g0210400' => 'osa', 'Os01g0304300' => 'osa', 'Os01g0749100' => 'osa', 'Os02g0745800' => 'osa', 'Os03g0769050' => 'osa', 'Os05g0531500' => 'osa', 'Os06g0724300' => 'osa', 'Os11g0198100' => 'osa', 'Peaxi162Scf00069g01425' => 'pax', 'Peaxi162Scf00280g00811' => 'pax', 'Peaxi162Scf00310g00615' => 'pax', 'Peaxi162Scf00362g00542' => 'pax', 'Peaxi162Scf00461g00310' => 'pax', 'Peaxi162Scf00530g00118' => 'pax', 'Peaxi162Scf00541g00057' => 'pax', 'Peaxi162Scf00661g00017' => 'pax', 'Peaxi162Scf00926g00027' => 'pax', 'Peaxi162Scf01064g00263' => 'pax', 'Peaxi162Scf01211g00135' => 'pax', 'PGR004G2336' => 'pgr', 'PGR042G0327' => 'pgr', 'PGR042G1957' => 'pgr', 'PGR042G2003' => 'pgr', 'PGR042G3929' => 'pgr', 'PGR083G1137' => 'pgr', 'PGR083G1364' => 'pgr', 'PGSC0003DMG400003381' => 'stu', 'PGSC0003DMG400003417' => 'stu', 'PGSC0003DMG400008981' => 'stu', 'PGSC0003DMG400012417' => 'stu', 'PGSC0003DMG400012823' => 'stu', 'PGSC0003DMG400016885' => 'stu', 'PGSC0003DMG400022812' => 'stu', 'PGSC0003DMG400029726' => 'stu', 'PGSC0003DMG401009243' => 'stu', 'PGSC0003DMG401031505' => 'stu', 'PGSC0003DMG402031505' => 'stu', 'Phvul.001G017600' => 'pvu', 'Phvul.002G193500' => 'pvu', 'Phvul.002G228900' => 'pvu', 'Phvul.002G236800' => 'pvu', 'Phvul.003G049500' => 'pvu', 'Phvul.005G072000' => 'pvu', 'Phvul.006G164800' => 'pvu', 'Phvul.006G185100' => 'pvu', 'Phvul.007G090000' => 'pvu', 'Potri.001G399800' => 'ptr', 'Potri.002G149900' => 'ptr', 'Potri.004G044100' => 'ptr', 'Potri.004G177600' => 'ptr', 'Potri.009G138000' => 'ptr', 'Potri.010G094000' => 'ptr', 'Potri.011G053000' => 'ptr', 'Potri.011G119300' => 'ptr', 'Potri.013G113700' => 'ptr', 'Potri.018G107800' => 'ptr', 'Potri.019G084100' => 'ptr', 'Pp3c14_23720' => 'ppa', 'Pp3c16_6340' => 'ppa', 'Pp3c23_13420' => 'ppa', 'Pp3c24_2740' => 'ppa', 'Pp3c25_860' => 'ppa', 'Pp3c8_21750' => 'ppa', 'Prupe.1G273000' => 'ppe', 'Prupe.1G273700' => 'ppe', 'Prupe.1G274100' => 'ppe', 'Prupe.2G023300' => 'ppe', 'Prupe.4G048000' => 'ppe', 'Prupe.4G080400' => 'ppe', 'Prupe.4G181200' => 'ppe', 'Prupe.8G056900' => 'ppe', 'Prupe.8G168700' => 'ppe', 'Psat1g189080' => 'psa', 'Psat1g204760' => 'psa', 'Psat4g175560' => 'psa', 'Psat4g177720' => 'psa', 'Psat5g244240' => 'psa', 'Psat6g010720' => 'psa', 'Psat6g187200' => 'psa', 'Psat7g072040' => 'psa', 'PSO017G3501' => 'pso', 'PSO063G2148' => 'pso', 'PSO063G5608' => 'pso', 'PSO210G6392' => 'pso', 'PSO541G2319' => 'pso', 'PSO541G2836' => 'pso', 'PSO541G4012' => 'pso', 'PSO541G6253' => 'pso', 'PSO675G0580' => 'pso', 'PSO675G0856' => 'pso', 'PSO675G5635' => 'pso', 'PSO675G9157' => 'pso', 'PSO832G1660' => 'pso', 'PSO832G1969' => 'pso', 'QL02p007186' => 'qlo', 'QL02p033904' => 'qlo', 'QL03p064391' => 'qlo', 'QL05p040593' => 'qlo', 'QL05p058242' => 'qlo', 'QL08p021825' => 'qlo', 'QL11p004981' => 'qlo', 'RcHm_v2.0_Chr1g0318301' => 'rch', 'RcHm_v2.0_Chr4g0418501' => 'rch', 'RcHm_v2.0_Chr4g0439971' => 'rch', 'RcHm_v2.0_Chr5g0008541' => 'rch', 'RcHm_v2.0_Chr5g0014101' => 'rch', 'RcHm_v2.0_Chr5g0014131' => 'rch', 'RcHm_v2.0_Chr5g0033621' => 'rch', 'RcHm_v2.0_Chr6g0272041' => 'rch', 'RcHm_v2.0_Chr6g0278831' => 'rch', 'Rhsim02G0130400' => 'rsi', 'Rhsim02G0171100' => 'rsi', 'Rhsim05G0053000' => 'rsi', 'Rhsim05G0053100' => 'rsi', 'Rhsim06G0096500' => 'rsi', 'Rhsim06G0096600' => 'rsi', 'Rhsim06G0199100' => 'rsi', 'Rhsim12G0062300' => 'rsi', 'Rhsim12G0062800' => 'rsi', 'Sabra02G0118600' => 'sbr', 'Sabra04G0027300' => 'sbr', 'Sabra04G0119500' => 'sbr', 'Sabra08G0112500' => 'sbr', 'Sabra11G0036800' => 'sbr', 'Sabra11G0103800' => 'sbr', 'Sabra13G0096300' => 'sbr', 'Sabra16G0262300' => 'sbr', 'Sabra18G0091700' => 'sbr', 'Sabra19G0095400' => 'sbr', 'SalBow6G3080' => 'sbo', 'SalBow7G1157' => 'sbo', 'SalBow7G2123' => 'sbo', 'SalBow7G2285' => 'sbo', 'SalBow7G3537' => 'sbo', 'SalBow8G2947' => 'sbo', 'SalBow8G4463' => 'sbo', 'SalBow8G5466' => 'sbo', 'Sc01g0001750' => 'sci', 'Sc02g0006640' => 'sci', 'Sc02g0006670' => 'sci', 'Sc04g0008220' => 'sci', 'Sc05g0006190' => 'sci', 'Sc08g0002760' => 'sci', 'Sc17g0006170' => 'sci', 'Sc22g0002050' => 'sci', 'Sc23g0001190' => 'sci', 'Sc24g0000980' => 'sci', 'Sed0006245' => 'sed', 'Sed0007543' => 'sed', 'Sed0009411' => 'sed', 'Sed0010765' => 'sed', 'Sed0012944' => 'sed', 'Sed0014682' => 'sed', 'Sed0016174' => 'sed', 'Sed0016796' => 'sed', 'Sed0020317' => 'sed', 'Sed0021467' => 'sed', 'SEGI_01316' => 'sgi', 'SEGI_03374' => 'sgi', 'SEGI_16265' => 'sgi', 'SEGI_18569' => 'sgi', 'SEGI_20351' => 'sgi', 'SEGI_26395' => 'sgi', 'SEGI_29469' => 'sgi', 'SEGI_34771' => 'sgi', 'SEGI_36769' => 'sgi', 'SEGI_37139' => 'sgi', 'SGA_v2.0_scaffold100G29687' => 'sas', 'SGA_v2.0_scaffold118G32472' => 'sas', 'SGA_v2.0_scaffold14G07051' => 'sas', 'SGA_v2.0_scaffold183G39845' => 'sas', 'SGA_v2.0_scaffold1G00174' => 'sas', 'SGA_v2.0_scaffold22G09714' => 'sas', 'SGA_v2.0_scaffold333G48992' => 'sas', 'SGA_v2.0_scaffold46G17491' => 'sas', 'SGA_v2.0_scaffold49G18294' => 'sas', 'SGA_v2.0_scaffold63G21658' => 'sas', 'SHI01741' => 'shi', 'SHI05771' => 'shi', 'SHI18077' => 'shi', 'SHI20525' => 'shi', 'SHI20527' => 'shi', 'SHI20528' => 'shi', 'SMO172G0185' => 'smo', 'SMO198G0020' => 'smo', 'SMO351G0006' => 'smo', 'SMO356G0118' => 'smo', 'SMO358G0296' => 'smo', 'SMO367G0079' => 'smo', 'SMO367G1277' => 'smo', 'Solyc01g014220.3' => 'sly', 'Solyc01g111770.2' => 'sly', 'Solyc02g078180.3' => 'sly', 'Solyc03g006430.3' => 'sly', 'Solyc03g006456.1' => 'sly', 'Solyc03g079860.2' => 'sly', 'Solyc04g079770.3' => 'sly', 'Solyc05g007430.4' => 'sly', 'Solyc07g063150.3' => 'sly', 'Solyc08g016620.3' => 'sly', 'Solyc09g057590.3' => 'sly', 'Solyc09g057600.1' => 'sly', 'Solyc10g009050.3' => 'sly', 'Solyc11g017420.2' => 'sly', 'Sopen01g053810' => 'spe', 'Sopen02g023040' => 'spe', 'Sopen03g002440' => 'spe', 'Sopen04g033350' => 'spe', 'Sopen05g003310' => 'spe', 'Sopen07g004050' => 'spe', 'Sopen07g031340' => 'spe', 'Sopen08g006990' => 'spe', 'Sopen10g004830' => 'spe', 'Sopen11g009370' => 'spe', 'Sp1g24450' => 'spa', 'Sp1g29670' => 'spa', 'Sp1g39600' => 'spa', 'Sp2g11080' => 'spa', 'Sp2g13970' => 'spa', 'Sp4g16130' => 'spa', 'Sp6g13080' => 'spa', 'Sp7g37270' => 'spa', 'TAR371G0065' => 'tar', 'TAR376G0340' => 'tar', 'TAR376G0435' => 'tar', 'TAR381G0002' => 'tar', 'TAR381G1236' => 'tar', 'TAR624G0055' => 'tar', 'TAR624G0324' => 'tar', 'TAR624G0696' => 'tar', 'TAR624G0906' => 'tar', 'TAR625G0107' => 'tar', 'TAR626G0015' => 'tar', 'TAR626G1356' => 'tar', 'TAR627G0888' => 'tar', 'TAR628G0399' => 'tar', 'TAR628G1327' => 'tar', 'TAR629G2831' => 'tar', 'TAR629G2874' => 'tar', 'TAR633G1432' => 'tar', 'TAR633G2771' => 'tar', 'THA.LOC104803394' => 'tha', 'THA.LOC104805153' => 'tha', 'THA.LOC104806784' => 'tha', 'THA.LOC104810473' => 'tha', 'THA.LOC104813100' => 'tha', 'THA.LOC104814215' => 'tha', 'THA.LOC104815554' => 'tha', 'THA.LOC104820544' => 'tha', 'THA.LOC104824754' => 'tha', 'THA.LOC104827717' => 'tha', 'Thecc.02G031400' => 'tca', 'Thecc.02G055900' => 'tca', 'Thecc.02G350800' => 'tca', 'Thecc.06G150900' => 'tca', 'Thecc.06G186600' => 'tca', 'Thecc.07G089600' => 'tca', 'Thecc.08G020400' => 'tca', 'Thecc.08G182100' => 'tca', 'Thhalv10000873m.g' => 'esa', 'Thhalv10004185m.g' => 'esa', 'Thhalv10006981m.g' => 'esa', 'Thhalv10007204m.g' => 'esa', 'Thhalv10011374m.g' => 'esa', 'Thhalv10013482m.g' => 'esa', 'Thhalv10017801m.g' => 'esa', 'Thhalv10024983m.g' => 'esa', 'TPR.G12072' => 'tpr', 'TPR.G15769' => 'tpr', 'TPR.G16504' => 'tpr', 'TPR.G16506' => 'tpr', 'TPR.G24345' => 'tpr', 'TPR.G26666' => 'tpr', 'TPR.G27320' => 'tpr', 'TPR.G31819' => 'tpr', 'TPR.G38879' => 'tpr', 'TPR.G39015' => 'tpr', 'TPR.G8819' => 'tpr', 'TWI09G0924' => 'twi', 'TWI12G0811' => 'twi', 'TWI12G1294' => 'twi', 'TWI31G0150' => 'twi', 'TWI36G1262' => 'twi', 'TWI38G1287' => 'twi', 'TWI38G1633' => 'twi', 'TWI38G1982' => 'twi', 'TWI39G0116' => 'twi', 'TWI60G1011' => 'twi', 'TWI63G0171' => 'twi', 'TWI73G0839' => 'twi', 'TWI79G1511' => 'twi', 'unitig_0.g915' => 'ugi', 'unitig_0.g916' => 'ugi', 'unitig_21.g20219' => 'ugi', 'unitig_21.g20416' => 'ugi', 'unitig_578.g16132' => 'ugi', 'unitig_578.g16718' => 'ugi', 'unitig_62.g23481' => 'ugi', 'unitig_744.g24535' => 'ugi', 'unitig_749.g13525' => 'ugi', 'vmacro01248' => 'vma', 'vmacro02290' => 'vma', 'vmacro10946' => 'vma', 'vmacro11865' => 'vma', 'vmacro12493' => 'vma', 'vmacro17322' => 'vma', 'vmacro21599' => 'vma', 'vmacro23041' => 'vma', 'VMungo0251G0004' => 'vmu', 'VMungo0251G2639' => 'vmu', 'VMungo0251G2967' => 'vmu', 'VMungo0540G0864' => 'vmu', 'VMungo0540G1569' => 'vmu', 'VMungo0647G0317' => 'vmu', 'VMungo0720G1373' => 'vmu', 'VMungo0720G1508' => 'vmu', 'VMungo1080G0485' => 'vmu', 'VMungo1215G3177' => 'vmu', 'Zm00001eb112600' => 'zma', 'Zm00001eb120220' => 'zma', 'Zm00001eb153240' => 'zma', 'Zm00001eb168880' => 'zma', 'Zm00001eb213920' => 'zma', 'Zm00001eb228280' => 'zma', 'Zm00001eb254580' => 'zma', 'Zm00001eb272180' => 'zma', 'Zm00001eb293190' => 'zma', 'Zm00001eb322930' => 'zma', 'Zm00001eb353360' => 'zma', 'Zm00001eb353390' => 'zma', 'Zm00001eb353430' => 'zma', 'Zm00001eb353440' => 'zma', 'Zm00001eb353780' => 'zma' ), 'gf_id' => 'HOM05D000499', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000499' ), 'data_identifier' => 'HOM05D000499', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000499', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1066', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p29780' => 'bna', 'A02p33180' => 'bna', 'A03p16470' => 'bna', 'A03p66010' => 'bna', 'A04p25970' => 'bna', 'A06p01270' => 'bna', 'A06p46080' => 'bna', 'A07p11400' => 'bna', 'A08p01840' => 'bna', 'A08p08230' => 'bna', 'A08p25740' => 'bna', 'A09p32070' => 'bna', 'A09p37830' => 'bna', 'A09p42840' => 'bna', 'A09p42850' => 'bna', 'Aa31LG10G2060' => 'aar', 'Aa31LG2G7410' => 'aar', 'Aa31LG6G10200' => 'aar', 'Aa31LG6G16680' => 'aar', 'Aa31LG6G8470' => 'aar', 'Aa31LG9G12730' => 'aar', 'Aa31LG9G13680' => 'aar', 'Aa31LG9G14920' => 'aar', 'Aa31LG9G6650' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4977' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5467' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3254' => 'aag', 'Actinidia02578' => 'ach', 'Actinidia07693' => 'ach', 'Actinidia08413' => 'ach', 'Actinidia08414' => 'ach', 'Actinidia15289' => 'ach', 'Actinidia19871' => 'ach', 'Actinidia21475' => 'ach', 'Actinidia22576' => 'ach', 'Actinidia28327' => 'ach', 'Actinidia32491' => 'ach', 'Actinidia39463' => 'ach', 'Actinidia39571' => 'ach', 'Ah.01g013750' => 'amhyb', 'Ah.01g023210' => 'amhyb', 'Ah.04g164850' => 'amhyb', 'Ah.05g178060' => 'amhyb', 'Ah.07g204270' => 'amhyb', 'Ah.07g208480' => 'amhyb', 'Ah.09g237410' => 'amhyb', 'Ah.14g089460' => 'amhyb', 'AL1G41790' => 'aly', 'AL1G49050' => 'aly', 'AL1G53810' => 'aly', 'AL1G61400' => 'aly', 'AL4G18580' => 'aly', 'AL5G12510' => 'aly', 'AL5G12540' => 'aly', 'AL6G43230' => 'aly', 'AL7G10370' => 'aly', 'AL7G19250' => 'aly', 'AL8G12240' => 'aly', 'AL8G18540' => 'aly', 'Aqoxy1G02409' => 'aox', 'Aqoxy2G03993' => 'aox', 'Aqoxy3G03357' => 'aox', 'Aqoxy4G00785' => 'aox', 'Aqoxy5G02598' => 'aox', 'Aqoxy6G00132' => 'aox', 'Aqoxy7G01776' => 'aox', 'Aqoxy7G02316' => 'aox', 'Aqoxy7G03973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.12AFKW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B8730' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27IQR1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3F75VG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3RE0GA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41TCQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.527VTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FIR39' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5W8UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DA38EV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ63HS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H1I32C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HC27T5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4M8AP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7N3CZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9UVDZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LS1NQA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT1D4B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SKC4TM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCFV76' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF9Q1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQWD9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1ZM88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WE07RT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YCK7VH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJE6Q6' => 'arhy', 'AT1G28240' => 'ath', 'AT1G34550' => 'ath', 'AT1G53040' => 'ath', 'AT2G02910' => 'ath', 'AT4G09630' => 'ath', 'AT4G38500' => 'ath', 'AT5G42660' => 'ath', 'AT5G46220' => 'ath', 'ATR0152G026' => 'atr', 'ATR0564G343' => 'atr', 'ATR0706G151' => 'atr', 'ATR0733G207' => 'atr', 'ATR0751G234' => 'atr', 'ATR0807G048' => 'atr', 'ATR1091G084' => 'atr', 'Atru.chr10.1229' => 'acertr', 'Atru.chr10.1230' => 'acertr', 'Atru.chr10.1874' => 'acertr', 'Atru.chr11.1808' => 'acertr', 'Atru.chr13.1795' => 'acertr', 'Atru.chr13.570' => 'acertr', 'Atru.chr2.2608' => 'acertr', 'Atru.chr2.2609' => 'acertr', 'Atru.chr5.3428' => 'acertr', 'Atru.chr8.1171' => 'acertr', 'AUR62004651' => 'cqu', 'AUR62008675' => 'cqu', 'AUR62010014' => 'cqu', 'AUR62013004' => 'cqu', 'AUR62014825' => 'cqu', 'AUR62015015' => 'cqu', 'AUR62015151' => 'cqu', 'AUR62017020' => 'cqu', 'AUR62019422' => 'cqu', 'AUR62023570' => 'cqu', 'AUR62025571' => 'cqu', 'AUR62029098' => 'cqu', 'AUR62033863' => 'cqu', 'AUR62034296' => 'cqu', 'AUR62040075' => 'cqu', 'BcaB02g07334' => 'bca', 'BcaB02g10575' => 'bca', 'BcaB03g12119' => 'bca', 'BcaB03g12120' => 'bca', 'BcaB03g13945' => 'bca', 'BcaB04g17123' => 'bca', 'BcaB04g17867' => 'bca', 'BcaB04g19839' => 'bca', 'BcaB07g30317' => 'bca', 'BcaB07g32432' => 'bca', 'BcaB07g33362' => 'bca', 'BcaB08g36611' => 'bca', 'BcaC01g00028' => 'bca', 'BcaC01g01356' => 'bca', 'BcaC01g02034' => 'bca', 'BcaC01g06051' => 'bca', 'BcaC03g16839' => 'bca', 'BcaC03g17176' => 'bca', 'BcaC05g26829' => 'bca', 'BcaC06g31490' => 'bca', 'BcaC06g35344' => 'bca', 'BcaC06g36570' => 'bca', 'BcaC07g37537' => 'bca', 'BcaC08g43491' => 'bca', 'BcaC08g43773' => 'bca', 'BcaNung00234' => 'bca', 'BcaNung01982' => 'bca', 'BcaNung03707' => 'bca', 'BcaNung06454' => 'bca', 'BolC2t10762H' => 'bol', 'BolC2t11191H' => 'bol', 'BolC3t14322H' => 'bol', 'BolC3t19747H' => 'bol', 'BolC3t21425H' => 'bol', 'BolC4t27800H' => 'bol', 'BolC5t31423H' => 'bol', 'BolC6t35951H' => 'bol', 'BolC6t36282H' => 'bol', 'BolC7t40678H' => 'bol', 'BolC7t40679H' => 'bol', 'BolC7t42222H' => 'bol', 'BolC7t43492H' => 'bol', 'BolC7t46785H' => 'bol', 'BolC8t47853H' => 'bol', 'BolC9t56805H' => 'bol', 'BraA02t08000Z' => 'bra', 'BraA02t08341Z' => 'bra', 'BraA03t10936Z' => 'bra', 'BraA03t15657Z' => 'bra', 'BraA04t18100Z' => 'bra', 'BraA05t20523Z' => 'bra', 'BraA06t23353Z' => 'bra', 'BraA06t27473Z' => 'bra', 'BraA06t27769Z' => 'bra', 'BraA07t28928Z' => 'bra', 'BraA08t32236Z' => 'bra', 'BraA08t32841Z' => 'bra', 'BraA08t34524Z' => 'bra', 'BraA09t38742Z' => 'bra', 'BraA09t39295Z' => 'bra', 'C02p47180' => 'bna', 'C02p50990' => 'bna', 'C03p19360' => 'bna', 'C03p74950' => 'bna', 'C03p91000' => 'bna', 'C04p63260' => 'bna', 'C05p27050' => 'bna', 'C06p08750' => 'bna', 'C06p11490' => 'bna', 'C07p02820' => 'bna', 'C07p17180' => 'bna', 'C07p29440' => 'bna', 'C07p63730' => 'bna', 'C09p39260' => 'bna', 'CAN.G1164.34' => 'can', 'CAN.G1164.39' => 'can', 'CAN.G1530.3' => 'can', 'CAN.G162.61' => 'can', 'CAN.G176.6' => 'can', 'CAN.G289.49' => 'can', 'CAN.G370.21' => 'can', 'CAN.G370.22' => 'can', 'CAN.G371.117' => 'can', 'CAN.G58.37' => 'can', 'CAN.G588.98' => 'can', 'CANSAT21G2266' => 'cansat', 'CANSAT25G2799' => 'cansat', 'CANSAT35G0862' => 'cansat', 'CANSAT35G1704' => 'cansat', 'CANSAT35G1760' => 'cansat', 'CANSAT56G3971' => 'cansat', 'CANSAT56G4116' => 'cansat', 'CANSAT80G1259' => 'cansat', 'CARHR027730' => 'chi', 'CARHR033880' => 'chi', 'CARHR043270' => 'chi', 'CARHR145330' => 'chi', 'CARHR145340' => 'chi', 'CARHR175570' => 'chi', 'CARHR181570' => 'chi', 'CARHR258470' => 'chi', 'CARHR260490' => 'chi', 'CARHR294220' => 'chi', 'Carub.0001s2668' => 'cru', 'Carub.0001s3257' => 'cru', 'Carub.0001s4220' => 'cru', 'Carub.0005s0179' => 'cru', 'Carub.0006s2807' => 'cru', 'Carub.0007s0039' => 'cru', 'Carub.0008s0169' => 'cru', 'Carub.0008s0636' => 'cru', 'Ca_00338_v3' => 'car', 'Ca_00542_v3' => 'car', 'Ca_01844_v3' => 'car', 'Ca_10611_v3' => 'car', 'Ca_13326_v3' => 'car', 'Ca_17944_v3' => 'car', 'Ca_18546_v3' => 'car', 'Ca_24219_v3' => 'car', 'Ca_29972_v3' => 'car', 'CBR_g3681' => 'cbr', 'CBR_g40021' => 'cbr', 'Cc01_g08140' => 'ccan', 'Cc02_g13410' => 'ccan', 'Cc02_g37480' => 'ccan', 'Cc05_g12030' => 'ccan', 'Cc09_g03370' => 'ccan', 'Cc09_g10300' => 'ccan', 'Cc10_g03530' => 'ccan', 'Cc10_g11380' => 'ccan', 'CDE01G0176' => 'cde', 'CDE02G0675' => 'cde', 'CDE02G0942' => 'cde', 'CDE02G1153' => 'cde', 'CDE02G4177' => 'cde', 'CDE04G2117' => 'cde', 'CDE04G2736' => 'cde', 'CDE08G1161' => 'cde', 'CDE09G1238' => 'cde', 'Cfa000467' => 'cfa', 'Cfa000947' => 'cfa', 'Cfa004969' => 'cfa', 'Cfa005284' => 'cfa', 'Cfa008993' => 'cfa', 'Cfa018187' => 'cfa', 'Cfa018454' => 'cfa', 'Cfa020585' => 'cfa', 'Ciclev10000424m.g' => 'ccl', 'Ciclev10003605m.g' => 'ccl', 'Ciclev10007828m.g' => 'ccl', 'Ciclev10014620m.g' => 'ccl', 'Ciclev10015169m.g' => 'ccl', 'Ciclev10018291m.g' => 'ccl', 'Ciclev10028256m.g' => 'ccl', 'Ciclev10033822m.g' => 'ccl', 'CiPaw.05G060300' => 'cil', 'CiPaw.05G085000' => 'cil', 'CiPaw.06G083700' => 'cil', 'CiPaw.06G120300' => 'cil', 'CiPaw.09G060500' => 'cil', 'CiPaw.09G123800' => 'cil', 'CiPaw.11G169700' => 'cil', 'CiPaw.12G118300' => 'cil', 'CiPaw.15G071000' => 'cil', 'CiPaw.15G081900' => 'cil', 'ClCG01G024610' => 'cla', 'ClCG03G006070' => 'cla', 'ClCG05G019250' => 'cla', 'ClCG09G009500' => 'cla', 'ClCG11G008200' => 'cla', 'ClCG11G018080' => 'cla', 'COL.COLO4_17373' => 'col', 'COL.COLO4_22994' => 'col', 'COL.COLO4_26389' => 'col', 'COL.COLO4_27170' => 'col', 'COL.COLO4_31074' => 'col', 'COL.COLO4_31465' => 'col', 'COL.COLO4_36438' => 'col', 'COL.COLO4_36439' => 'col', 'Cpa.g.c38781' => 'cpa', 'Cpa.g.sc128.12' => 'cpa', 'Cpa.g.sc166.7' => 'cpa', 'Cpa.g.sc166.8' => 'cpa', 'Cpa.g.sc20.111' => 'cpa', 'Cpa.g.sc27.31' => 'cpa', 'Cpa.g.sc64.36' => 'cpa', 'Cpa.g.sc64.37' => 'cpa', 'Cpa.g.sc66.49' => 'cpa', 'Cpa.g.sc80.64' => 'cpa', 'CsaV3_1G012320' => 'csa', 'CsaV3_2G008480' => 'csa', 'CsaV3_2G033450' => 'csa', 'CsaV3_3G044830' => 'csa', 'CsaV3_4G033710' => 'csa', 'CsaV3_6G051730' => 'csa', 'CsaV3_7G025350' => 'csa', 'CSS0001067' => 'camsi', 'CSS0005996' => 'camsi', 'CSS0006590' => 'camsi', 'CSS0009673' => 'camsi', 'CSS0010201' => 'camsi', 'CSS0010549' => 'camsi', 'CSS0011364' => 'camsi', 'CSS0014473' => 'camsi', 'CSS0014961' => 'camsi', 'CSS0020191' => 'camsi', 'CSS0021165' => 'camsi', 'CSS0022306' => 'camsi', 'CSS0030591' => 'camsi', 'CSS0030696' => 'camsi', 'CSS0032653' => 'camsi', 'CSS0037487' => 'camsi', 'CSS0041102' => 'camsi', 'CSS0041261' => 'camsi', 'CSS0046246' => 'camsi', 'CSS0049256' => 'camsi', 'DCAR_004075' => 'dca', 'DCAR_011538' => 'dca', 'DCAR_019553' => 'dca', 'DCAR_020952' => 'dca', 'DCAR_021739' => 'dca', 'DCAR_027407' => 'dca', 'DCAR_027913' => 'dca', 'DCAR_028066' => 'dca', 'Dinv05899' => 'din', 'Dinv07563' => 'din', 'Dinv08010' => 'din', 'Dinv14125' => 'din', 'Dinv20172' => 'din', 'Dinv30743' => 'din', 'Dinv31229' => 'din', 'Dinv34162' => 'din', 'Dinv36028' => 'din', 'Dinv39368' => 'din', 'Dinv40565' => 'din', 'Dinv41706' => 'din', 'Duzib052G0089' => 'dzi', 'Duzib116G0641' => 'dzi', 'Duzib132G0069' => 'dzi', 'Duzib132G1219' => 'dzi', 'Duzib147G0278' => 'dzi', 'Duzib160G0480' => 'dzi', 'Duzib170G0661' => 'dzi', 'Duzib177G0591' => 'dzi', 'Duzib187G1353' => 'dzi', 'Duzib192G0858' => 'dzi', 'Duzib192G0883' => 'dzi', 'Duzib213G0506' => 'dzi', 'Duzib235G0289' => 'dzi', 'Duzib251G0422' => 'dzi', 'ECA232G3898' => 'eca', 'ECA233G5950' => 'eca', 'ECA234G1699' => 'eca', 'ECA234G2421' => 'eca', 'ECA236G0426' => 'eca', 'ECA236G4331' => 'eca', 'ECA248G2573' => 'eca', 'EL10Ac1g00077' => 'bvu', 'EL10Ac1g01746' => 'bvu', 'EL10Ac2g03464' => 'bvu', 'EL10Ac4g08176' => 'bvu', 'EL10Ac7g17521' => 'bvu', 'EL10Ac8g20386' => 'bvu', 'EL10Ac9g21343' => 'bvu', 'EL10Ac9g22688' => 'bvu', 'Eucgr.B03434' => 'egr', 'Eucgr.D00618' => 'egr', 'Eucgr.E02395' => 'egr', 'Eucgr.F01129' => 'egr', 'Eucgr.F02622' => 'egr', 'Eucgr.F04207' => 'egr', 'FAN01G0570' => 'fan', 'FAN03G3351' => 'fan', 'FAN06G3702' => 'fan', 'FAN07G2149' => 'fan', 'FAN10G3758' => 'fan', 'FAN11G1170' => 'fan', 'FAN11G2050' => 'fan', 'FAN11G2724' => 'fan', 'FAN12G1700' => 'fan', 'FAN12G2028' => 'fan', 'FAN15G1160' => 'fan', 'FAN15G3063' => 'fan', 'FAN16G2540' => 'fan', 'FAN16G3077' => 'fan', 'FAN16G3624' => 'fan', 'FAN17G0221' => 'fan', 'FAN20G2492' => 'fan', 'FAN20G2905' => 'fan', 'FAN21G0548' => 'fan', 'FAN21G1300' => 'fan', 'FAN22G0077' => 'fan', 'FAN22G1315' => 'fan', 'FAN24G1280' => 'fan', 'FAN24G1445' => 'fan', 'FAN24G3527' => 'fan', 'FAN25G0464' => 'fan', 'FAN25G2885' => 'fan', 'FAN25G3270' => 'fan', 'FAN27G1101' => 'fan', 'FAN27G2846' => 'fan', 'FAN27G3524' => 'fan', 'FvH4_2g11770' => 'fve', 'FvH4_2g15630' => 'fve', 'FvH4_3g05570' => 'fve', 'FvH4_3g09110' => 'fve', 'FvH4_3g19940' => 'fve', 'FvH4_4g04821' => 'fve', 'FvH4_4g31480' => 'fve', 'FvH4_7g01740' => 'fve', 'Glyma.05G130400' => 'gma', 'Glyma.05G156400' => 'gma', 'Glyma.07G197000' => 'gma', 'Glyma.08G085151' => 'gma', 'Glyma.08G114500' => 'gma', 'Glyma.08G300400' => 'gma', 'Glyma.10G215800' => 'gma', 'Glyma.12G224400' => 'gma', 'Glyma.13G179300' => 'gma', 'Glyma.13G218151' => 'gma', 'Glyma.13G238800' => 'gma', 'Glyma.13G276900' => 'gma', 'Glyma.14G078200' => 'gma', 'Glyma.15G074500' => 'gma', 'Glyma.15G094100' => 'gma', 'Glyma.17G247200' => 'gma', 'Glyma.18G120100' => 'gma', 'Glyma.20G176000' => 'gma', 'Gohir.A01G063600' => 'ghi', 'Gohir.A01G170301' => 'ghi', 'Gohir.A02G060500' => 'ghi', 'Gohir.A05G133850' => 'ghi', 'Gohir.A05G161400' => 'ghi', 'Gohir.A06G012900' => 'ghi', 'Gohir.A06G035901' => 'ghi', 'Gohir.A06G127100' => 'ghi', 'Gohir.A06G210500' => 'ghi', 'Gohir.A08G008650' => 'ghi', 'Gohir.A09G072700' => 'ghi', 'Gohir.A09G088301' => 'ghi', 'Gohir.A10G040600' => 'ghi', 'Gohir.A12G036300' => 'ghi', 'Gohir.A12G143350' => 'ghi', 'Gohir.A12G165500' => 'ghi', 'Gohir.A13G145700' => 'ghi', 'Gohir.D01G050000' => 'ghi', 'Gohir.D01G051366' => 'ghi', 'Gohir.D01G161350' => 'ghi', 'Gohir.D02G065900' => 'ghi', 'Gohir.D05G164200' => 'ghi', 'Gohir.D05G355500' => 'ghi', 'Gohir.D06G010400' => 'ghi', 'Gohir.D06G111250' => 'ghi', 'Gohir.D06G132000' => 'ghi', 'Gohir.D06G210500' => 'ghi', 'Gohir.D07G165675' => 'ghi', 'Gohir.D08G062240' => 'ghi', 'Gohir.D08G086101' => 'ghi', 'Gohir.D08G138060' => 'ghi', 'Gohir.D09G072300' => 'ghi', 'Gohir.D10G041400' => 'ghi', 'Gohir.D11G191020' => 'ghi', 'Gohir.D11G212066' => 'ghi', 'Gohir.D12G036300' => 'ghi', 'Gohir.D12G168600' => 'ghi', 'Gohir.D13G150600' => 'ghi', 'Gorai.001G057300' => 'gra', 'Gorai.002G069900' => 'gra', 'Gorai.002G200000' => 'gra', 'Gorai.003G067600' => 'gra', 'Gorai.005G074800' => 'gra', 'Gorai.006G087300' => 'gra', 'Gorai.008G037500' => 'gra', 'Gorai.008G181400' => 'gra', 'Gorai.009G169400' => 'gra', 'Gorai.009G387900' => 'gra', 'Gorai.010G013300' => 'gra', 'Gorai.010G153800' => 'gra', 'Gorai.010G255800' => 'gra', 'Gorai.011G043700' => 'gra', 'Gorai.011G198900' => 'gra', 'Gorai.013G168400' => 'gra', 'GSVIVG01005212001' => 'vvi', 'GSVIVG01006163001' => 'vvi', 'GSVIVG01009625001' => 'vvi', 'GSVIVG01014338001' => 'vvi', 'GSVIVG01020005001' => 'vvi', 'GSVIVG01021450001' => 'vvi', 'GSVIVG01023975001' => 'vvi', 'GSVIVG01034490001' => 'vvi', 'HanXRQChr04g0112071' => 'han', 'HanXRQChr05g0131151' => 'han', 'HanXRQChr09g0262371' => 'han', 'HanXRQChr09g0268401' => 'han', 'HanXRQChr10g0279241' => 'han', 'HanXRQChr10g0297961' => 'han', 'HanXRQChr11g0326231' => 'han', 'HanXRQChr11g0328471' => 'han', 'HanXRQChr16g0507941' => 'han', 'HanXRQChr17g0560211' => 'han', 'Haze_02108' => 'cav', 'Haze_02428' => 'cav', 'Haze_05593' => 'cav', 'Haze_06448' => 'cav', 'Haze_09427' => 'cav', 'Haze_12022' => 'cav', 'Haze_17612' => 'cav', 'Haze_17928' => 'cav', 'Hma1.2p1_0032F.1_g019250' => 'hma', 'Hma1.2p1_0163F.1_g072690' => 'hma', 'Hma1.2p1_0265F.1_g106710' => 'hma', 'Hma1.2p1_0286F.1_g113970' => 'hma', 'Hma1.2p1_0363F.1_g136640' => 'hma', 'Hma1.2p1_0584F.1_g183470' => 'hma', 'Hma1.2p1_0885F.1_g232570' => 'hma', 'HPP92_006022' => 'vpl', 'HPP92_007320' => 'vpl', 'HPP92_011521' => 'vpl', 'HPP92_019387' => 'vpl', 'HPP92_024038' => 'vpl', 'Hund05891' => 'sun', 'Hund06450' => 'sun', 'Hund12053' => 'sun', 'Hund16800' => 'sun', 'Hund21222' => 'sun', 'Hund22896' => 'sun', 'Hund23746' => 'sun', 'Hund27083' => 'sun', 'Lalb_Chr02g0141831' => 'lal', 'Lalb_Chr02g0141841' => 'lal', 'Lalb_Chr05g0220411' => 'lal', 'Lalb_Chr06g0162081' => 'lal', 'Lalb_Chr09g0327651' => 'lal', 'Lalb_Chr13g0295051' => 'lal', 'Lalb_Chr15g0086801' => 'lal', 'Lalb_Chr16g0383781' => 'lal', 'Lalb_Chr16g0383791' => 'lal', 'Lalb_Chr18g0055441' => 'lal', 'Lalb_Chr18g0059611' => 'lal', 'Lalb_Chr20g0109661' => 'lal', 'Lalb_Chr20g0109831' => 'lal', 'Lalb_Chr20g0121871' => 'lal', 'Lalb_Chr22g0355361' => 'lal', 'Lalb_Chr25g0286371' => 'lal', 'Lj1A1187G43' => 'lonja', 'Lj1A1205T50' => 'lonja', 'Lj1A800G33' => 'lonja', 'Lj1C1187T7' => 'lonja', 'Lj1C843T11' => 'lonja', 'Lj1g0010940' => 'lja', 'Lj2A288T69' => 'lonja', 'Lj3g0024276' => 'lja', 'Lj4A47T76' => 'lonja', 'Lj4g0005805' => 'lja', 'Lj4g0006097' => 'lja', 'Lj4g0008528' => 'lja', 'Lj4g0024907' => 'lja', 'Lj5g0012472' => 'lja', 'Lj5g0018648' => 'lja', 'Lj6C789G1' => 'lonja', 'Lj6g0004000' => 'lja', 'Lj7A292G67' => 'lonja', 'Lj7A292T64' => 'lonja', 'Lj9A400T58' => 'lonja', 'Lsat_1_v5_gn_1_126181' => 'lsa', 'Lsat_1_v5_gn_4_123041' => 'lsa', 'Lsat_1_v5_gn_4_133620' => 'lsa', 'Lsat_1_v5_gn_4_53221' => 'lsa', 'Lsat_1_v5_gn_4_71961' => 'lsa', 'Lsat_1_v5_gn_7_105241' => 'lsa', 'Lsat_1_v5_gn_7_21361' => 'lsa', 'Lsat_1_v5_gn_7_28860' => 'lsa', 'Lsat_1_v5_gn_7_31260' => 'lsa', 'Lsat_1_v5_gn_8_52801' => 'lsa', 'Manes.02G191400' => 'mes', 'Manes.03G110100' => 'mes', 'Manes.04G071100' => 'mes', 'Manes.05G100500' => 'mes', 'Manes.05G164700' => 'mes', 'Manes.15G087000' => 'mes', 'Manes.15G121500' => 'mes', 'Manes.16G028300' => 'mes', 'Manes.17G046100' => 'mes', 'Manes.17G069800' => 'mes', 'Manes.18G100500' => 'mes', 'Mapoly0002s0109' => 'mpo', 'Mapoly0024s0007' => 'mpo', 'Mapoly0089s0032' => 'mpo', 'MBI04_g42241_MAGBIO' => 'mbi', 'MBI05_g11988_MAGBIO' => 'mbi', 'MBI05_g35452_MAGBIO' => 'mbi', 'MBI07_g30179_MAGBIO' => 'mbi', 'MBI07_g35859_MAGBIO' => 'mbi', 'MBI07_g35860_MAGBIO' => 'mbi', 'MBI07_g37166_MAGBIO' => 'mbi', 'MBI08_g18172_MAGBIO' => 'mbi', 'MBI09_g08441_MAGBIO' => 'mbi', 'MBI13_g01676_MAGBIO' => 'mbi', 'MBI14_g42955_MAGBIO' => 'mbi', 'MBI16_g13161_MAGBIO' => 'mbi', 'MBI17_g27204_MAGBIO' => 'mbi', 'MBI19_g21595_MAGBIO' => 'mbi', 'MD00G1148400' => 'mdo', 'MD02G1301200' => 'mdo', 'MD03G1227800' => 'mdo', 'MD05G1041100' => 'mdo', 'MD05G1124800' => 'mdo', 'MD05G1284000' => 'mdo', 'MD05G1338800' => 'mdo', 'MD05G1338900' => 'mdo', 'MD07G1022800' => 'mdo', 'MD10G1047500' => 'mdo', 'MD10G1127500' => 'mdo', 'MD10G1262300' => 'mdo', 'MD10G1293800' => 'mdo', 'MD16G1074300' => 'mdo', 'Medtr1g021670' => 'mtr', 'Medtr1g096320' => 'mtr', 'Medtr2g013690' => 'mtr', 'Medtr2g019450' => 'mtr', 'Medtr2g085170' => 'mtr', 'Medtr4g088785' => 'mtr', 'Medtr8g055930' => 'mtr', 'Medtr8g085850' => 'mtr', 'MELO3C002605.2' => 'cme', 'MELO3C003891.2' => 'cme', 'MELO3C004012.2' => 'cme', 'MELO3C007134.2' => 'cme', 'MELO3C008118.2' => 'cme', 'MELO3C016700.2' => 'cme', 'MELO3C024127.2' => 'cme', 'MELO3C033361.2' => 'cme', 'MELO3C033362.2' => 'cme', 'Migut.C00430' => 'egut', 'Migut.C01246' => 'egut', 'Migut.E00101' => 'egut', 'Migut.H01486' => 'egut', 'Migut.H01939' => 'egut', 'Migut.K00360' => 'egut', 'Migut.M00910' => 'egut', 'Migut.M01139' => 'egut', 'Migut.N02677' => 'egut', 'MSTRG.13252' => 'ama', 'MSTRG.14701' => 'ama', 'MSTRG.1521' => 'ama', 'MSTRG.15884' => 'ama', 'MSTRG.16242' => 'ama', 'MSTRG.22285' => 'ama', 'MSTRG.22444' => 'ama', 'MSTRG.2349' => 'ama', 'MSTRG.26308' => 'ama', 'MSTRG.28296' => 'ama', 'MSTRG.9895' => 'ama', 'Nitab4.5_0000110g0060' => 'nta', 'Nitab4.5_0000420g0130' => 'nta', 'Nitab4.5_0000422g0030' => 'nta', 'Nitab4.5_0000560g0180' => 'nta', 'Nitab4.5_0000703g0100' => 'nta', 'Nitab4.5_0000786g0200' => 'nta', 'Nitab4.5_0001336g0020' => 'nta', 'Nitab4.5_0001796g0030' => 'nta', 'Nitab4.5_0003348g0060' => 'nta', 'Nitab4.5_0003698g0040' => 'nta', 'Nitab4.5_0003942g0090' => 'nta', 'Nitab4.5_0004775g0070' => 'nta', 'Nitab4.5_0004864g0030' => 'nta', 'Nitab4.5_0005615g0020' => 'nta', 'Nitab4.5_0009288g0030' => 'nta', 'Nitab4.5_0009341g0010' => 'nta', 'Nitab4.5_0009535g0010' => 'nta', 'Nn1g03995' => 'nnu', 'Nn1g04100' => 'nnu', 'Nn1g06530' => 'nnu', 'Nn3g16404' => 'nnu', 'Nn3g17212' => 'nnu', 'Nn3g20776' => 'nnu', 'Nn3g21923' => 'nnu', 'Nn5g27737' => 'nnu', 'Nn5g29461' => 'nnu', 'Nn7g38355' => 'nnu', 'Nn8g39873' => 'nnu', 'Oeu000548.2' => 'oeu', 'Oeu004672.1' => 'oeu', 'Oeu015605.2' => 'oeu', 'Oeu016092.1' => 'oeu', 'Oeu017879.3' => 'oeu', 'Oeu024910.1' => 'oeu', 'Oeu028965.1' => 'oeu', 'Oeu031269.1' => 'oeu', 'Oeu031270.1' => 'oeu', 'Oeu032535.1' => 'oeu', 'Oeu034151.1' => 'oeu', 'Oeu034152.1' => 'oeu', 'Oeu034588.2' => 'oeu', 'Oeu050846.1' => 'oeu', 'Oeu050849.2' => 'oeu', 'Oeu051063.2' => 'oeu', 'Oeu052368.1' => 'oeu', 'Oeu052370.1' => 'oeu', 'Os01g0210400' => 'osa', 'Os01g0304300' => 'osa', 'Os01g0749100' => 'osa', 'Os02g0745800' => 'osa', 'Os03g0769050' => 'osa', 'Os05g0531500' => 'osa', 'Os06g0724300' => 'osa', 'Os11g0198100' => 'osa', 'Peaxi162Scf00069g01425' => 'pax', 'Peaxi162Scf00280g00811' => 'pax', 'Peaxi162Scf00310g00615' => 'pax', 'Peaxi162Scf00362g00542' => 'pax', 'Peaxi162Scf00461g00310' => 'pax', 'Peaxi162Scf00530g00118' => 'pax', 'Peaxi162Scf00541g00057' => 'pax', 'Peaxi162Scf00661g00017' => 'pax', 'Peaxi162Scf00926g00027' => 'pax', 'Peaxi162Scf01064g00263' => 'pax', 'Peaxi162Scf01211g00135' => 'pax', 'PGR004G2336' => 'pgr', 'PGR042G0327' => 'pgr', 'PGR042G1957' => 'pgr', 'PGR042G2003' => 'pgr', 'PGR042G3929' => 'pgr', 'PGR083G1137' => 'pgr', 'PGR083G1364' => 'pgr', 'PGSC0003DMG400003381' => 'stu', 'PGSC0003DMG400003417' => 'stu', 'PGSC0003DMG400008981' => 'stu', 'PGSC0003DMG400012417' => 'stu', 'PGSC0003DMG400012823' => 'stu', 'PGSC0003DMG400016885' => 'stu', 'PGSC0003DMG400022812' => 'stu', 'PGSC0003DMG400029726' => 'stu', 'PGSC0003DMG401009243' => 'stu', 'PGSC0003DMG401031505' => 'stu', 'PGSC0003DMG402031505' => 'stu', 'Phvul.001G017600' => 'pvu', 'Phvul.002G193500' => 'pvu', 'Phvul.002G228900' => 'pvu', 'Phvul.002G236800' => 'pvu', 'Phvul.003G049500' => 'pvu', 'Phvul.005G072000' => 'pvu', 'Phvul.006G164800' => 'pvu', 'Phvul.006G185100' => 'pvu', 'Phvul.007G090000' => 'pvu', 'Potri.001G399800' => 'ptr', 'Potri.002G149900' => 'ptr', 'Potri.004G044100' => 'ptr', 'Potri.004G177600' => 'ptr', 'Potri.009G138000' => 'ptr', 'Potri.010G094000' => 'ptr', 'Potri.011G053000' => 'ptr', 'Potri.011G119300' => 'ptr', 'Potri.013G113700' => 'ptr', 'Potri.018G107800' => 'ptr', 'Potri.019G084100' => 'ptr', 'Pp3c14_23720' => 'ppa', 'Pp3c16_6340' => 'ppa', 'Pp3c23_13420' => 'ppa', 'Pp3c24_2740' => 'ppa', 'Pp3c25_860' => 'ppa', 'Pp3c8_21750' => 'ppa', 'Prupe.1G273000' => 'ppe', 'Prupe.1G273700' => 'ppe', 'Prupe.1G274100' => 'ppe', 'Prupe.2G023300' => 'ppe', 'Prupe.4G048000' => 'ppe', 'Prupe.4G080400' => 'ppe', 'Prupe.4G181200' => 'ppe', 'Prupe.8G056900' => 'ppe', 'Prupe.8G168700' => 'ppe', 'Psat1g189080' => 'psa', 'Psat1g204760' => 'psa', 'Psat4g175560' => 'psa', 'Psat4g177720' => 'psa', 'Psat5g244240' => 'psa', 'Psat6g010720' => 'psa', 'Psat6g187200' => 'psa', 'Psat7g072040' => 'psa', 'PSO017G3501' => 'pso', 'PSO063G2148' => 'pso', 'PSO063G5608' => 'pso', 'PSO210G6392' => 'pso', 'PSO541G2319' => 'pso', 'PSO541G2836' => 'pso', 'PSO541G4012' => 'pso', 'PSO541G6253' => 'pso', 'PSO675G0580' => 'pso', 'PSO675G0856' => 'pso', 'PSO675G5635' => 'pso', 'PSO675G9157' => 'pso', 'PSO832G1660' => 'pso', 'PSO832G1969' => 'pso', 'QL02p007186' => 'qlo', 'QL02p033904' => 'qlo', 'QL03p064391' => 'qlo', 'QL05p040593' => 'qlo', 'QL05p058242' => 'qlo', 'QL08p021825' => 'qlo', 'QL11p004981' => 'qlo', 'RcHm_v2.0_Chr1g0318301' => 'rch', 'RcHm_v2.0_Chr4g0418501' => 'rch', 'RcHm_v2.0_Chr4g0439971' => 'rch', 'RcHm_v2.0_Chr5g0008541' => 'rch', 'RcHm_v2.0_Chr5g0014101' => 'rch', 'RcHm_v2.0_Chr5g0014131' => 'rch', 'RcHm_v2.0_Chr5g0033621' => 'rch', 'RcHm_v2.0_Chr6g0272041' => 'rch', 'RcHm_v2.0_Chr6g0278831' => 'rch', 'Rhsim02G0130400' => 'rsi', 'Rhsim02G0171100' => 'rsi', 'Rhsim05G0053000' => 'rsi', 'Rhsim05G0053100' => 'rsi', 'Rhsim06G0096500' => 'rsi', 'Rhsim06G0096600' => 'rsi', 'Rhsim06G0199100' => 'rsi', 'Rhsim12G0062300' => 'rsi', 'Rhsim12G0062800' => 'rsi', 'Sabra02G0118600' => 'sbr', 'Sabra04G0027300' => 'sbr', 'Sabra04G0119500' => 'sbr', 'Sabra08G0112500' => 'sbr', 'Sabra11G0036800' => 'sbr', 'Sabra11G0103800' => 'sbr', 'Sabra13G0096300' => 'sbr', 'Sabra16G0262300' => 'sbr', 'Sabra18G0091700' => 'sbr', 'Sabra19G0095400' => 'sbr', 'SalBow6G3080' => 'sbo', 'SalBow7G1157' => 'sbo', 'SalBow7G2123' => 'sbo', 'SalBow7G2285' => 'sbo', 'SalBow7G3537' => 'sbo', 'SalBow8G2947' => 'sbo', 'SalBow8G4463' => 'sbo', 'SalBow8G5466' => 'sbo', 'Sc01g0001750' => 'sci', 'Sc02g0006640' => 'sci', 'Sc02g0006670' => 'sci', 'Sc04g0008220' => 'sci', 'Sc05g0006190' => 'sci', 'Sc08g0002760' => 'sci', 'Sc17g0006170' => 'sci', 'Sc22g0002050' => 'sci', 'Sc23g0001190' => 'sci', 'Sc24g0000980' => 'sci', 'Sed0006245' => 'sed', 'Sed0007543' => 'sed', 'Sed0009411' => 'sed', 'Sed0010765' => 'sed', 'Sed0012944' => 'sed', 'Sed0014682' => 'sed', 'Sed0016174' => 'sed', 'Sed0016796' => 'sed', 'Sed0020317' => 'sed', 'Sed0021467' => 'sed', 'SEGI_01316' => 'sgi', 'SEGI_03374' => 'sgi', 'SEGI_16265' => 'sgi', 'SEGI_18569' => 'sgi', 'SEGI_20351' => 'sgi', 'SEGI_26395' => 'sgi', 'SEGI_29469' => 'sgi', 'SEGI_34771' => 'sgi', 'SEGI_36769' => 'sgi', 'SEGI_37139' => 'sgi', 'SGA_v2.0_scaffold100G29687' => 'sas', 'SGA_v2.0_scaffold118G32472' => 'sas', 'SGA_v2.0_scaffold14G07051' => 'sas', 'SGA_v2.0_scaffold183G39845' => 'sas', 'SGA_v2.0_scaffold1G00174' => 'sas', 'SGA_v2.0_scaffold22G09714' => 'sas', 'SGA_v2.0_scaffold333G48992' => 'sas', 'SGA_v2.0_scaffold46G17491' => 'sas', 'SGA_v2.0_scaffold49G18294' => 'sas', 'SGA_v2.0_scaffold63G21658' => 'sas', 'SHI01741' => 'shi', 'SHI05771' => 'shi', 'SHI18077' => 'shi', 'SHI20525' => 'shi', 'SHI20527' => 'shi', 'SHI20528' => 'shi', 'SMO172G0185' => 'smo', 'SMO198G0020' => 'smo', 'SMO351G0006' => 'smo', 'SMO356G0118' => 'smo', 'SMO358G0296' => 'smo', 'SMO367G0079' => 'smo', 'SMO367G1277' => 'smo', 'Solyc01g014220.3' => 'sly', 'Solyc01g111770.2' => 'sly', 'Solyc02g078180.3' => 'sly', 'Solyc03g006430.3' => 'sly', 'Solyc03g006456.1' => 'sly', 'Solyc03g079860.2' => 'sly', 'Solyc04g079770.3' => 'sly', 'Solyc05g007430.4' => 'sly', 'Solyc07g063150.3' => 'sly', 'Solyc08g016620.3' => 'sly', 'Solyc09g057590.3' => 'sly', 'Solyc09g057600.1' => 'sly', 'Solyc10g009050.3' => 'sly', 'Solyc11g017420.2' => 'sly', 'Sopen01g053810' => 'spe', 'Sopen02g023040' => 'spe', 'Sopen03g002440' => 'spe', 'Sopen04g033350' => 'spe', 'Sopen05g003310' => 'spe', 'Sopen07g004050' => 'spe', 'Sopen07g031340' => 'spe', 'Sopen08g006990' => 'spe', 'Sopen10g004830' => 'spe', 'Sopen11g009370' => 'spe', 'Sp1g24450' => 'spa', 'Sp1g29670' => 'spa', 'Sp1g39600' => 'spa', 'Sp2g11080' => 'spa', 'Sp2g13970' => 'spa', 'Sp4g16130' => 'spa', 'Sp6g13080' => 'spa', 'Sp7g37270' => 'spa', 'TAR371G0065' => 'tar', 'TAR376G0340' => 'tar', 'TAR376G0435' => 'tar', 'TAR381G0002' => 'tar', 'TAR381G1236' => 'tar', 'TAR624G0055' => 'tar', 'TAR624G0324' => 'tar', 'TAR624G0696' => 'tar', 'TAR624G0906' => 'tar', 'TAR625G0107' => 'tar', 'TAR626G0015' => 'tar', 'TAR626G1356' => 'tar', 'TAR627G0888' => 'tar', 'TAR628G0399' => 'tar', 'TAR628G1327' => 'tar', 'TAR629G2831' => 'tar', 'TAR629G2874' => 'tar', 'TAR633G1432' => 'tar', 'TAR633G2771' => 'tar', 'THA.LOC104803394' => 'tha', 'THA.LOC104805153' => 'tha', 'THA.LOC104806784' => 'tha', 'THA.LOC104810473' => 'tha', 'THA.LOC104813100' => 'tha', 'THA.LOC104814215' => 'tha', 'THA.LOC104815554' => 'tha', 'THA.LOC104820544' => 'tha', 'THA.LOC104824754' => 'tha', 'THA.LOC104827717' => 'tha', 'Thecc.02G031400' => 'tca', 'Thecc.02G055900' => 'tca', 'Thecc.02G350800' => 'tca', 'Thecc.06G150900' => 'tca', 'Thecc.06G186600' => 'tca', 'Thecc.07G089600' => 'tca', 'Thecc.08G020400' => 'tca', 'Thecc.08G182100' => 'tca', 'Thhalv10000873m.g' => 'esa', 'Thhalv10004185m.g' => 'esa', 'Thhalv10006981m.g' => 'esa', 'Thhalv10007204m.g' => 'esa', 'Thhalv10011374m.g' => 'esa', 'Thhalv10013482m.g' => 'esa', 'Thhalv10017801m.g' => 'esa', 'Thhalv10024983m.g' => 'esa', 'TPR.G12072' => 'tpr', 'TPR.G15769' => 'tpr', 'TPR.G16504' => 'tpr', 'TPR.G16506' => 'tpr', 'TPR.G24345' => 'tpr', 'TPR.G26666' => 'tpr', 'TPR.G27320' => 'tpr', 'TPR.G31819' => 'tpr', 'TPR.G38879' => 'tpr', 'TPR.G39015' => 'tpr', 'TPR.G8819' => 'tpr', 'TWI09G0924' => 'twi', 'TWI12G0811' => 'twi', 'TWI12G1294' => 'twi', 'TWI31G0150' => 'twi', 'TWI36G1262' => 'twi', 'TWI38G1287' => 'twi', 'TWI38G1633' => 'twi', 'TWI38G1982' => 'twi', 'TWI39G0116' => 'twi', 'TWI60G1011' => 'twi', 'TWI63G0171' => 'twi', 'TWI73G0839' => 'twi', 'TWI79G1511' => 'twi', 'unitig_0.g915' => 'ugi', 'unitig_0.g916' => 'ugi', 'unitig_21.g20219' => 'ugi', 'unitig_21.g20416' => 'ugi', 'unitig_578.g16132' => 'ugi', 'unitig_578.g16718' => 'ugi', 'unitig_62.g23481' => 'ugi', 'unitig_744.g24535' => 'ugi', 'unitig_749.g13525' => 'ugi', 'vmacro01248' => 'vma', 'vmacro02290' => 'vma', 'vmacro10946' => 'vma', 'vmacro11865' => 'vma', 'vmacro12493' => 'vma', 'vmacro17322' => 'vma', 'vmacro21599' => 'vma', 'vmacro23041' => 'vma', 'VMungo0251G0004' => 'vmu', 'VMungo0251G2639' => 'vmu', 'VMungo0251G2967' => 'vmu', 'VMungo0540G0864' => 'vmu', 'VMungo0540G1569' => 'vmu', 'VMungo0647G0317' => 'vmu', 'VMungo0720G1373' => 'vmu', 'VMungo0720G1508' => 'vmu', 'VMungo1080G0485' => 'vmu', 'VMungo1215G3177' => 'vmu', 'Zm00001eb112600' => 'zma', 'Zm00001eb120220' => 'zma', 'Zm00001eb153240' => 'zma', 'Zm00001eb168880' => 'zma', 'Zm00001eb213920' => 'zma', 'Zm00001eb228280' => 'zma', 'Zm00001eb254580' => 'zma', 'Zm00001eb272180' => 'zma', 'Zm00001eb293190' => 'zma', 'Zm00001eb322930' => 'zma', 'Zm00001eb353360' => 'zma', 'Zm00001eb353390' => 'zma', 'Zm00001eb353430' => 'zma', 'Zm00001eb353440' => 'zma', 'Zm00001eb353780' => 'zma' ) $gf_id = 'HOM05D000499' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000499' ) $data_identifier = 'HOM05D000499' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 29, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 12, 'amhyb' => (int) 8, 'aly' => (int) 12, 'aox' => (int) 9, 'arhy' => (int) 26, 'ath' => (int) 8, 'atr' => (int) 7, 'acertr' => (int) 10, 'cqu' => (int) 15, 'bca' => (int) 29, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 11, 'cansat' => (int) 8, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 9, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 8, 'cpa' => (int) 10, 'csa' => (int) 7, 'camsi' => (int) 20, 'dca' => (int) 8, 'din' => (int) 12, 'dzi' => (int) 14, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 6, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 38, 'gra' => (int) 16, 'vvi' => (int) 8, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 5, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 11, 'lja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 11, 'mpo' => (int) 3, 'mbi' => (int) 14, 'mdo' => (int) 14, 'mtr' => (int) 8, 'cme' => (int) 9, 'egut' => (int) 9, 'ama' => (int) 11, 'nta' => (int) 17, 'nnu' => (int) 11, 'oeu' => (int) 18, 'osa' => (int) 8, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 6, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 9, 'rsi' => (int) 9, 'sbr' => (int) 10, 'sbo' => (int) 8, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 10, 'sas' => (int) 10, 'shi' => (int) 6, 'smo' => (int) 7, 'sly' => (int) 14, 'spe' => (int) 10, 'spa' => (int) 8, 'tar' => (int) 19, 'tha' => (int) 10, 'tca' => (int) 8, 'esa' => (int) 8, 'tpr' => (int) 11, 'twi' => (int) 13, 'ugi' => (int) 9, 'vma' => (int) 8, 'vmu' => (int) 10, 'zma' => (int) 15 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb353780' $species_info = array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ) $local_species = 'dzi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000499', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1066', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p29780' => 'bna', 'A02p33180' => 'bna', 'A03p16470' => 'bna', 'A03p66010' => 'bna', 'A04p25970' => 'bna', 'A06p01270' => 'bna', 'A06p46080' => 'bna', 'A07p11400' => 'bna', 'A08p01840' => 'bna', 'A08p08230' => 'bna', 'A08p25740' => 'bna', 'A09p32070' => 'bna', 'A09p37830' => 'bna', 'A09p42840' => 'bna', 'A09p42850' => 'bna', 'Aa31LG10G2060' => 'aar', 'Aa31LG2G7410' => 'aar', 'Aa31LG6G10200' => 'aar', 'Aa31LG6G16680' => 'aar', 'Aa31LG6G8470' => 'aar', 'Aa31LG9G12730' => 'aar', 'Aa31LG9G13680' => 'aar', 'Aa31LG9G14920' => 'aar', 'Aa31LG9G6650' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4977' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5467' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3254' => 'aag', 'Actinidia02578' => 'ach', 'Actinidia07693' => 'ach', 'Actinidia08413' => 'ach', 'Actinidia08414' => 'ach', 'Actinidia15289' => 'ach', 'Actinidia19871' => 'ach', 'Actinidia21475' => 'ach', 'Actinidia22576' => 'ach', 'Actinidia28327' => 'ach', 'Actinidia32491' => 'ach', 'Actinidia39463' => 'ach', 'Actinidia39571' => 'ach', 'Ah.01g013750' => 'amhyb', 'Ah.01g023210' => 'amhyb', 'Ah.04g164850' => 'amhyb', 'Ah.05g178060' => 'amhyb', 'Ah.07g204270' => 'amhyb', 'Ah.07g208480' => 'amhyb', 'Ah.09g237410' => 'amhyb', 'Ah.14g089460' => 'amhyb', 'AL1G41790' => 'aly', 'AL1G49050' => 'aly', 'AL1G53810' => 'aly', 'AL1G61400' => 'aly', 'AL4G18580' => 'aly', 'AL5G12510' => 'aly', 'AL5G12540' => 'aly', 'AL6G43230' => 'aly', 'AL7G10370' => 'aly', 'AL7G19250' => 'aly', 'AL8G12240' => 'aly', 'AL8G18540' => 'aly', 'Aqoxy1G02409' => 'aox', 'Aqoxy2G03993' => 'aox', 'Aqoxy3G03357' => 'aox', 'Aqoxy4G00785' => 'aox', 'Aqoxy5G02598' => 'aox', 'Aqoxy6G00132' => 'aox', 'Aqoxy7G01776' => 'aox', 'Aqoxy7G02316' => 'aox', 'Aqoxy7G03973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.12AFKW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B8730' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27IQR1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3F75VG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3RE0GA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41TCQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.527VTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FIR39' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5W8UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DA38EV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ63HS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H1I32C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HC27T5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4M8AP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7N3CZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9UVDZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LS1NQA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT1D4B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SKC4TM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCFV76' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF9Q1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQWD9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1ZM88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WE07RT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YCK7VH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJE6Q6' => 'arhy', 'AT1G28240' => 'ath', 'AT1G34550' => 'ath', 'AT1G53040' => 'ath', 'AT2G02910' => 'ath', 'AT4G09630' => 'ath', 'AT4G38500' => 'ath', 'AT5G42660' => 'ath', 'AT5G46220' => 'ath', 'ATR0152G026' => 'atr', 'ATR0564G343' => 'atr', 'ATR0706G151' => 'atr', 'ATR0733G207' => 'atr', 'ATR0751G234' => 'atr', 'ATR0807G048' => 'atr', 'ATR1091G084' => 'atr', 'Atru.chr10.1229' => 'acertr', 'Atru.chr10.1230' => 'acertr', 'Atru.chr10.1874' => 'acertr', 'Atru.chr11.1808' => 'acertr', 'Atru.chr13.1795' => 'acertr', 'Atru.chr13.570' => 'acertr', 'Atru.chr2.2608' => 'acertr', 'Atru.chr2.2609' => 'acertr', 'Atru.chr5.3428' => 'acertr', 'Atru.chr8.1171' => 'acertr', 'AUR62004651' => 'cqu', 'AUR62008675' => 'cqu', 'AUR62010014' => 'cqu', 'AUR62013004' => 'cqu', 'AUR62014825' => 'cqu', 'AUR62015015' => 'cqu', 'AUR62015151' => 'cqu', 'AUR62017020' => 'cqu', 'AUR62019422' => 'cqu', 'AUR62023570' => 'cqu', 'AUR62025571' => 'cqu', 'AUR62029098' => 'cqu', 'AUR62033863' => 'cqu', 'AUR62034296' => 'cqu', 'AUR62040075' => 'cqu', 'BcaB02g07334' => 'bca', 'BcaB02g10575' => 'bca', 'BcaB03g12119' => 'bca', 'BcaB03g12120' => 'bca', 'BcaB03g13945' => 'bca', 'BcaB04g17123' => 'bca', 'BcaB04g17867' => 'bca', 'BcaB04g19839' => 'bca', 'BcaB07g30317' => 'bca', 'BcaB07g32432' => 'bca', 'BcaB07g33362' => 'bca', 'BcaB08g36611' => 'bca', 'BcaC01g00028' => 'bca', 'BcaC01g01356' => 'bca', 'BcaC01g02034' => 'bca', 'BcaC01g06051' => 'bca', 'BcaC03g16839' => 'bca', 'BcaC03g17176' => 'bca', 'BcaC05g26829' => 'bca', 'BcaC06g31490' => 'bca', 'BcaC06g35344' => 'bca', 'BcaC06g36570' => 'bca', 'BcaC07g37537' => 'bca', 'BcaC08g43491' => 'bca', 'BcaC08g43773' => 'bca', 'BcaNung00234' => 'bca', 'BcaNung01982' => 'bca', 'BcaNung03707' => 'bca', 'BcaNung06454' => 'bca', 'BolC2t10762H' => 'bol', 'BolC2t11191H' => 'bol', 'BolC3t14322H' => 'bol', 'BolC3t19747H' => 'bol', 'BolC3t21425H' => 'bol', 'BolC4t27800H' => 'bol', 'BolC5t31423H' => 'bol', 'BolC6t35951H' => 'bol', 'BolC6t36282H' => 'bol', 'BolC7t40678H' => 'bol', 'BolC7t40679H' => 'bol', 'BolC7t42222H' => 'bol', 'BolC7t43492H' => 'bol', 'BolC7t46785H' => 'bol', 'BolC8t47853H' => 'bol', 'BolC9t56805H' => 'bol', 'BraA02t08000Z' => 'bra', 'BraA02t08341Z' => 'bra', 'BraA03t10936Z' => 'bra', 'BraA03t15657Z' => 'bra', 'BraA04t18100Z' => 'bra', 'BraA05t20523Z' => 'bra', 'BraA06t23353Z' => 'bra', 'BraA06t27473Z' => 'bra', 'BraA06t27769Z' => 'bra', 'BraA07t28928Z' => 'bra', 'BraA08t32236Z' => 'bra', 'BraA08t32841Z' => 'bra', 'BraA08t34524Z' => 'bra', 'BraA09t38742Z' => 'bra', 'BraA09t39295Z' => 'bra', 'C02p47180' => 'bna', 'C02p50990' => 'bna', 'C03p19360' => 'bna', 'C03p74950' => 'bna', 'C03p91000' => 'bna', 'C04p63260' => 'bna', 'C05p27050' => 'bna', 'C06p08750' => 'bna', 'C06p11490' => 'bna', 'C07p02820' => 'bna', 'C07p17180' => 'bna', 'C07p29440' => 'bna', 'C07p63730' => 'bna', 'C09p39260' => 'bna', 'CAN.G1164.34' => 'can', 'CAN.G1164.39' => 'can', 'CAN.G1530.3' => 'can', 'CAN.G162.61' => 'can', 'CAN.G176.6' => 'can', 'CAN.G289.49' => 'can', 'CAN.G370.21' => 'can', 'CAN.G370.22' => 'can', 'CAN.G371.117' => 'can', 'CAN.G58.37' => 'can', 'CAN.G588.98' => 'can', 'CANSAT21G2266' => 'cansat', 'CANSAT25G2799' => 'cansat', 'CANSAT35G0862' => 'cansat', 'CANSAT35G1704' => 'cansat', 'CANSAT35G1760' => 'cansat', 'CANSAT56G3971' => 'cansat', 'CANSAT56G4116' => 'cansat', 'CANSAT80G1259' => 'cansat', 'CARHR027730' => 'chi', 'CARHR033880' => 'chi', 'CARHR043270' => 'chi', 'CARHR145330' => 'chi', 'CARHR145340' => 'chi', 'CARHR175570' => 'chi', 'CARHR181570' => 'chi', 'CARHR258470' => 'chi', 'CARHR260490' => 'chi', 'CARHR294220' => 'chi', 'Carub.0001s2668' => 'cru', 'Carub.0001s3257' => 'cru', 'Carub.0001s4220' => 'cru', 'Carub.0005s0179' => 'cru', 'Carub.0006s2807' => 'cru', 'Carub.0007s0039' => 'cru', 'Carub.0008s0169' => 'cru', 'Carub.0008s0636' => 'cru', 'Ca_00338_v3' => 'car', 'Ca_00542_v3' => 'car', 'Ca_01844_v3' => 'car', 'Ca_10611_v3' => 'car', 'Ca_13326_v3' => 'car', 'Ca_17944_v3' => 'car', 'Ca_18546_v3' => 'car', 'Ca_24219_v3' => 'car', 'Ca_29972_v3' => 'car', 'CBR_g3681' => 'cbr', 'CBR_g40021' => 'cbr', 'Cc01_g08140' => 'ccan', 'Cc02_g13410' => 'ccan', 'Cc02_g37480' => 'ccan', 'Cc05_g12030' => 'ccan', 'Cc09_g03370' => 'ccan', 'Cc09_g10300' => 'ccan', 'Cc10_g03530' => 'ccan', 'Cc10_g11380' => 'ccan', 'CDE01G0176' => 'cde', 'CDE02G0675' => 'cde', 'CDE02G0942' => 'cde', 'CDE02G1153' => 'cde', 'CDE02G4177' => 'cde', 'CDE04G2117' => 'cde', 'CDE04G2736' => 'cde', 'CDE08G1161' => 'cde', 'CDE09G1238' => 'cde', 'Cfa000467' => 'cfa', 'Cfa000947' => 'cfa', 'Cfa004969' => 'cfa', 'Cfa005284' => 'cfa', 'Cfa008993' => 'cfa', 'Cfa018187' => 'cfa', 'Cfa018454' => 'cfa', 'Cfa020585' => 'cfa', 'Ciclev10000424m.g' => 'ccl', 'Ciclev10003605m.g' => 'ccl', 'Ciclev10007828m.g' => 'ccl', 'Ciclev10014620m.g' => 'ccl', 'Ciclev10015169m.g' => 'ccl', 'Ciclev10018291m.g' => 'ccl', 'Ciclev10028256m.g' => 'ccl', 'Ciclev10033822m.g' => 'ccl', 'CiPaw.05G060300' => 'cil', 'CiPaw.05G085000' => 'cil', 'CiPaw.06G083700' => 'cil', 'CiPaw.06G120300' => 'cil', 'CiPaw.09G060500' => 'cil', 'CiPaw.09G123800' => 'cil', 'CiPaw.11G169700' => 'cil', 'CiPaw.12G118300' => 'cil', 'CiPaw.15G071000' => 'cil', 'CiPaw.15G081900' => 'cil', 'ClCG01G024610' => 'cla', 'ClCG03G006070' => 'cla', 'ClCG05G019250' => 'cla', 'ClCG09G009500' => 'cla', 'ClCG11G008200' => 'cla', 'ClCG11G018080' => 'cla', 'COL.COLO4_17373' => 'col', 'COL.COLO4_22994' => 'col', 'COL.COLO4_26389' => 'col', 'COL.COLO4_27170' => 'col', 'COL.COLO4_31074' => 'col', 'COL.COLO4_31465' => 'col', 'COL.COLO4_36438' => 'col', 'COL.COLO4_36439' => 'col', 'Cpa.g.c38781' => 'cpa', 'Cpa.g.sc128.12' => 'cpa', 'Cpa.g.sc166.7' => 'cpa', 'Cpa.g.sc166.8' => 'cpa', 'Cpa.g.sc20.111' => 'cpa', 'Cpa.g.sc27.31' => 'cpa', 'Cpa.g.sc64.36' => 'cpa', 'Cpa.g.sc64.37' => 'cpa', 'Cpa.g.sc66.49' => 'cpa', 'Cpa.g.sc80.64' => 'cpa', 'CsaV3_1G012320' => 'csa', 'CsaV3_2G008480' => 'csa', 'CsaV3_2G033450' => 'csa', 'CsaV3_3G044830' => 'csa', 'CsaV3_4G033710' => 'csa', 'CsaV3_6G051730' => 'csa', 'CsaV3_7G025350' => 'csa', 'CSS0001067' => 'camsi', 'CSS0005996' => 'camsi', 'CSS0006590' => 'camsi', 'CSS0009673' => 'camsi', 'CSS0010201' => 'camsi', 'CSS0010549' => 'camsi', 'CSS0011364' => 'camsi', 'CSS0014473' => 'camsi', 'CSS0014961' => 'camsi', 'CSS0020191' => 'camsi', 'CSS0021165' => 'camsi', 'CSS0022306' => 'camsi', 'CSS0030591' => 'camsi', 'CSS0030696' => 'camsi', 'CSS0032653' => 'camsi', 'CSS0037487' => 'camsi', 'CSS0041102' => 'camsi', 'CSS0041261' => 'camsi', 'CSS0046246' => 'camsi', 'CSS0049256' => 'camsi', 'DCAR_004075' => 'dca', 'DCAR_011538' => 'dca', 'DCAR_019553' => 'dca', 'DCAR_020952' => 'dca', 'DCAR_021739' => 'dca', 'DCAR_027407' => 'dca', 'DCAR_027913' => 'dca', 'DCAR_028066' => 'dca', 'Dinv05899' => 'din', 'Dinv07563' => 'din', 'Dinv08010' => 'din', 'Dinv14125' => 'din', 'Dinv20172' => 'din', 'Dinv30743' => 'din', 'Dinv31229' => 'din', 'Dinv34162' => 'din', 'Dinv36028' => 'din', 'Dinv39368' => 'din', 'Dinv40565' => 'din', 'Dinv41706' => 'din', 'Duzib052G0089' => 'dzi', 'Duzib116G0641' => 'dzi', 'Duzib132G0069' => 'dzi', 'Duzib132G1219' => 'dzi', 'Duzib147G0278' => 'dzi', 'Duzib160G0480' => 'dzi', 'Duzib170G0661' => 'dzi', 'Duzib177G0591' => 'dzi', 'Duzib187G1353' => 'dzi', 'Duzib192G0858' => 'dzi', 'Duzib192G0883' => 'dzi', 'Duzib213G0506' => 'dzi', 'Duzib235G0289' => 'dzi', 'Duzib251G0422' => 'dzi', 'ECA232G3898' => 'eca', 'ECA233G5950' => 'eca', 'ECA234G1699' => 'eca', 'ECA234G2421' => 'eca', 'ECA236G0426' => 'eca', 'ECA236G4331' => 'eca', 'ECA248G2573' => 'eca', 'EL10Ac1g00077' => 'bvu', 'EL10Ac1g01746' => 'bvu', 'EL10Ac2g03464' => 'bvu', 'EL10Ac4g08176' => 'bvu', 'EL10Ac7g17521' => 'bvu', 'EL10Ac8g20386' => 'bvu', 'EL10Ac9g21343' => 'bvu', 'EL10Ac9g22688' => 'bvu', 'Eucgr.B03434' => 'egr', 'Eucgr.D00618' => 'egr', 'Eucgr.E02395' => 'egr', 'Eucgr.F01129' => 'egr', 'Eucgr.F02622' => 'egr', 'Eucgr.F04207' => 'egr', 'FAN01G0570' => 'fan', 'FAN03G3351' => 'fan', 'FAN06G3702' => 'fan', 'FAN07G2149' => 'fan', 'FAN10G3758' => 'fan', 'FAN11G1170' => 'fan', 'FAN11G2050' => 'fan', 'FAN11G2724' => 'fan', 'FAN12G1700' => 'fan', 'FAN12G2028' => 'fan', 'FAN15G1160' => 'fan', 'FAN15G3063' => 'fan', 'FAN16G2540' => 'fan', 'FAN16G3077' => 'fan', 'FAN16G3624' => 'fan', 'FAN17G0221' => 'fan', 'FAN20G2492' => 'fan', 'FAN20G2905' => 'fan', 'FAN21G0548' => 'fan', 'FAN21G1300' => 'fan', 'FAN22G0077' => 'fan', 'FAN22G1315' => 'fan', 'FAN24G1280' => 'fan', 'FAN24G1445' => 'fan', 'FAN24G3527' => 'fan', 'FAN25G0464' => 'fan', 'FAN25G2885' => 'fan', 'FAN25G3270' => 'fan', 'FAN27G1101' => 'fan', 'FAN27G2846' => 'fan', 'FAN27G3524' => 'fan', 'FvH4_2g11770' => 'fve', 'FvH4_2g15630' => 'fve', 'FvH4_3g05570' => 'fve', 'FvH4_3g09110' => 'fve', 'FvH4_3g19940' => 'fve', 'FvH4_4g04821' => 'fve', 'FvH4_4g31480' => 'fve', 'FvH4_7g01740' => 'fve', 'Glyma.05G130400' => 'gma', 'Glyma.05G156400' => 'gma', 'Glyma.07G197000' => 'gma', 'Glyma.08G085151' => 'gma', 'Glyma.08G114500' => 'gma', 'Glyma.08G300400' => 'gma', 'Glyma.10G215800' => 'gma', 'Glyma.12G224400' => 'gma', 'Glyma.13G179300' => 'gma', 'Glyma.13G218151' => 'gma', 'Glyma.13G238800' => 'gma', 'Glyma.13G276900' => 'gma', 'Glyma.14G078200' => 'gma', 'Glyma.15G074500' => 'gma', 'Glyma.15G094100' => 'gma', 'Glyma.17G247200' => 'gma', 'Glyma.18G120100' => 'gma', 'Glyma.20G176000' => 'gma', 'Gohir.A01G063600' => 'ghi', 'Gohir.A01G170301' => 'ghi', 'Gohir.A02G060500' => 'ghi', 'Gohir.A05G133850' => 'ghi', 'Gohir.A05G161400' => 'ghi', 'Gohir.A06G012900' => 'ghi', 'Gohir.A06G035901' => 'ghi', 'Gohir.A06G127100' => 'ghi', 'Gohir.A06G210500' => 'ghi', 'Gohir.A08G008650' => 'ghi', 'Gohir.A09G072700' => 'ghi', 'Gohir.A09G088301' => 'ghi', 'Gohir.A10G040600' => 'ghi', 'Gohir.A12G036300' => 'ghi', 'Gohir.A12G143350' => 'ghi', 'Gohir.A12G165500' => 'ghi', 'Gohir.A13G145700' => 'ghi', 'Gohir.D01G050000' => 'ghi', 'Gohir.D01G051366' => 'ghi', 'Gohir.D01G161350' => 'ghi', 'Gohir.D02G065900' => 'ghi', 'Gohir.D05G164200' => 'ghi', 'Gohir.D05G355500' => 'ghi', 'Gohir.D06G010400' => 'ghi', 'Gohir.D06G111250' => 'ghi', 'Gohir.D06G132000' => 'ghi', 'Gohir.D06G210500' => 'ghi', 'Gohir.D07G165675' => 'ghi', 'Gohir.D08G062240' => 'ghi', 'Gohir.D08G086101' => 'ghi', 'Gohir.D08G138060' => 'ghi', 'Gohir.D09G072300' => 'ghi', 'Gohir.D10G041400' => 'ghi', 'Gohir.D11G191020' => 'ghi', 'Gohir.D11G212066' => 'ghi', 'Gohir.D12G036300' => 'ghi', 'Gohir.D12G168600' => 'ghi', 'Gohir.D13G150600' => 'ghi', 'Gorai.001G057300' => 'gra', 'Gorai.002G069900' => 'gra', 'Gorai.002G200000' => 'gra', 'Gorai.003G067600' => 'gra', 'Gorai.005G074800' => 'gra', 'Gorai.006G087300' => 'gra', 'Gorai.008G037500' => 'gra', 'Gorai.008G181400' => 'gra', 'Gorai.009G169400' => 'gra', 'Gorai.009G387900' => 'gra', 'Gorai.010G013300' => 'gra', 'Gorai.010G153800' => 'gra', 'Gorai.010G255800' => 'gra', 'Gorai.011G043700' => 'gra', 'Gorai.011G198900' => 'gra', 'Gorai.013G168400' => 'gra', 'GSVIVG01005212001' => 'vvi', 'GSVIVG01006163001' => 'vvi', 'GSVIVG01009625001' => 'vvi', 'GSVIVG01014338001' => 'vvi', 'GSVIVG01020005001' => 'vvi', 'GSVIVG01021450001' => 'vvi', 'GSVIVG01023975001' => 'vvi', 'GSVIVG01034490001' => 'vvi', 'HanXRQChr04g0112071' => 'han', 'HanXRQChr05g0131151' => 'han', 'HanXRQChr09g0262371' => 'han', 'HanXRQChr09g0268401' => 'han', 'HanXRQChr10g0279241' => 'han', 'HanXRQChr10g0297961' => 'han', 'HanXRQChr11g0326231' => 'han', 'HanXRQChr11g0328471' => 'han', 'HanXRQChr16g0507941' => 'han', 'HanXRQChr17g0560211' => 'han', 'Haze_02108' => 'cav', 'Haze_02428' => 'cav', 'Haze_05593' => 'cav', 'Haze_06448' => 'cav', 'Haze_09427' => 'cav', 'Haze_12022' => 'cav', 'Haze_17612' => 'cav', 'Haze_17928' => 'cav', 'Hma1.2p1_0032F.1_g019250' => 'hma', 'Hma1.2p1_0163F.1_g072690' => 'hma', 'Hma1.2p1_0265F.1_g106710' => 'hma', 'Hma1.2p1_0286F.1_g113970' => 'hma', 'Hma1.2p1_0363F.1_g136640' => 'hma', 'Hma1.2p1_0584F.1_g183470' => 'hma', 'Hma1.2p1_0885F.1_g232570' => 'hma', 'HPP92_006022' => 'vpl', 'HPP92_007320' => 'vpl', 'HPP92_011521' => 'vpl', 'HPP92_019387' => 'vpl', 'HPP92_024038' => 'vpl', 'Hund05891' => 'sun', 'Hund06450' => 'sun', 'Hund12053' => 'sun', 'Hund16800' => 'sun', 'Hund21222' => 'sun', 'Hund22896' => 'sun', 'Hund23746' => 'sun', 'Hund27083' => 'sun', 'Lalb_Chr02g0141831' => 'lal', 'Lalb_Chr02g0141841' => 'lal', 'Lalb_Chr05g0220411' => 'lal', 'Lalb_Chr06g0162081' => 'lal', 'Lalb_Chr09g0327651' => 'lal', 'Lalb_Chr13g0295051' => 'lal', 'Lalb_Chr15g0086801' => 'lal', 'Lalb_Chr16g0383781' => 'lal', 'Lalb_Chr16g0383791' => 'lal', 'Lalb_Chr18g0055441' => 'lal', 'Lalb_Chr18g0059611' => 'lal', 'Lalb_Chr20g0109661' => 'lal', 'Lalb_Chr20g0109831' => 'lal', 'Lalb_Chr20g0121871' => 'lal', 'Lalb_Chr22g0355361' => 'lal', 'Lalb_Chr25g0286371' => 'lal', 'Lj1A1187G43' => 'lonja', 'Lj1A1205T50' => 'lonja', 'Lj1A800G33' => 'lonja', 'Lj1C1187T7' => 'lonja', 'Lj1C843T11' => 'lonja', 'Lj1g0010940' => 'lja', 'Lj2A288T69' => 'lonja', 'Lj3g0024276' => 'lja', 'Lj4A47T76' => 'lonja', 'Lj4g0005805' => 'lja', 'Lj4g0006097' => 'lja', 'Lj4g0008528' => 'lja', 'Lj4g0024907' => 'lja', 'Lj5g0012472' => 'lja', 'Lj5g0018648' => 'lja', 'Lj6C789G1' => 'lonja', 'Lj6g0004000' => 'lja', 'Lj7A292G67' => 'lonja', 'Lj7A292T64' => 'lonja', 'Lj9A400T58' => 'lonja', 'Lsat_1_v5_gn_1_126181' => 'lsa', 'Lsat_1_v5_gn_4_123041' => 'lsa', 'Lsat_1_v5_gn_4_133620' => 'lsa', 'Lsat_1_v5_gn_4_53221' => 'lsa', 'Lsat_1_v5_gn_4_71961' => 'lsa', 'Lsat_1_v5_gn_7_105241' => 'lsa', 'Lsat_1_v5_gn_7_21361' => 'lsa', 'Lsat_1_v5_gn_7_28860' => 'lsa', 'Lsat_1_v5_gn_7_31260' => 'lsa', 'Lsat_1_v5_gn_8_52801' => 'lsa', 'Manes.02G191400' => 'mes', 'Manes.03G110100' => 'mes', 'Manes.04G071100' => 'mes', 'Manes.05G100500' => 'mes', 'Manes.05G164700' => 'mes', 'Manes.15G087000' => 'mes', 'Manes.15G121500' => 'mes', 'Manes.16G028300' => 'mes', 'Manes.17G046100' => 'mes', 'Manes.17G069800' => 'mes', 'Manes.18G100500' => 'mes', 'Mapoly0002s0109' => 'mpo', 'Mapoly0024s0007' => 'mpo', 'Mapoly0089s0032' => 'mpo', 'MBI04_g42241_MAGBIO' => 'mbi', 'MBI05_g11988_MAGBIO' => 'mbi', 'MBI05_g35452_MAGBIO' => 'mbi', 'MBI07_g30179_MAGBIO' => 'mbi', 'MBI07_g35859_MAGBIO' => 'mbi', 'MBI07_g35860_MAGBIO' => 'mbi', 'MBI07_g37166_MAGBIO' => 'mbi', 'MBI08_g18172_MAGBIO' => 'mbi', 'MBI09_g08441_MAGBIO' => 'mbi', 'MBI13_g01676_MAGBIO' => 'mbi', 'MBI14_g42955_MAGBIO' => 'mbi', 'MBI16_g13161_MAGBIO' => 'mbi', 'MBI17_g27204_MAGBIO' => 'mbi', 'MBI19_g21595_MAGBIO' => 'mbi', 'MD00G1148400' => 'mdo', 'MD02G1301200' => 'mdo', 'MD03G1227800' => 'mdo', 'MD05G1041100' => 'mdo', 'MD05G1124800' => 'mdo', 'MD05G1284000' => 'mdo', 'MD05G1338800' => 'mdo', 'MD05G1338900' => 'mdo', 'MD07G1022800' => 'mdo', 'MD10G1047500' => 'mdo', 'MD10G1127500' => 'mdo', 'MD10G1262300' => 'mdo', 'MD10G1293800' => 'mdo', 'MD16G1074300' => 'mdo', 'Medtr1g021670' => 'mtr', 'Medtr1g096320' => 'mtr', 'Medtr2g013690' => 'mtr', 'Medtr2g019450' => 'mtr', 'Medtr2g085170' => 'mtr', 'Medtr4g088785' => 'mtr', 'Medtr8g055930' => 'mtr', 'Medtr8g085850' => 'mtr', 'MELO3C002605.2' => 'cme', 'MELO3C003891.2' => 'cme', 'MELO3C004012.2' => 'cme', 'MELO3C007134.2' => 'cme', 'MELO3C008118.2' => 'cme', 'MELO3C016700.2' => 'cme', 'MELO3C024127.2' => 'cme', 'MELO3C033361.2' => 'cme', 'MELO3C033362.2' => 'cme', 'Migut.C00430' => 'egut', 'Migut.C01246' => 'egut', 'Migut.E00101' => 'egut', 'Migut.H01486' => 'egut', 'Migut.H01939' => 'egut', 'Migut.K00360' => 'egut', 'Migut.M00910' => 'egut', 'Migut.M01139' => 'egut', 'Migut.N02677' => 'egut', 'MSTRG.13252' => 'ama', 'MSTRG.14701' => 'ama', 'MSTRG.1521' => 'ama', 'MSTRG.15884' => 'ama', 'MSTRG.16242' => 'ama', 'MSTRG.22285' => 'ama', 'MSTRG.22444' => 'ama', 'MSTRG.2349' => 'ama', 'MSTRG.26308' => 'ama', 'MSTRG.28296' => 'ama', 'MSTRG.9895' => 'ama', 'Nitab4.5_0000110g0060' => 'nta', 'Nitab4.5_0000420g0130' => 'nta', 'Nitab4.5_0000422g0030' => 'nta', 'Nitab4.5_0000560g0180' => 'nta', 'Nitab4.5_0000703g0100' => 'nta', 'Nitab4.5_0000786g0200' => 'nta', 'Nitab4.5_0001336g0020' => 'nta', 'Nitab4.5_0001796g0030' => 'nta', 'Nitab4.5_0003348g0060' => 'nta', 'Nitab4.5_0003698g0040' => 'nta', 'Nitab4.5_0003942g0090' => 'nta', 'Nitab4.5_0004775g0070' => 'nta', 'Nitab4.5_0004864g0030' => 'nta', 'Nitab4.5_0005615g0020' => 'nta', 'Nitab4.5_0009288g0030' => 'nta', 'Nitab4.5_0009341g0010' => 'nta', 'Nitab4.5_0009535g0010' => 'nta', 'Nn1g03995' => 'nnu', 'Nn1g04100' => 'nnu', 'Nn1g06530' => 'nnu', 'Nn3g16404' => 'nnu', 'Nn3g17212' => 'nnu', 'Nn3g20776' => 'nnu', 'Nn3g21923' => 'nnu', 'Nn5g27737' => 'nnu', 'Nn5g29461' => 'nnu', 'Nn7g38355' => 'nnu', 'Nn8g39873' => 'nnu', 'Oeu000548.2' => 'oeu', 'Oeu004672.1' => 'oeu', 'Oeu015605.2' => 'oeu', 'Oeu016092.1' => 'oeu', 'Oeu017879.3' => 'oeu', 'Oeu024910.1' => 'oeu', 'Oeu028965.1' => 'oeu', 'Oeu031269.1' => 'oeu', 'Oeu031270.1' => 'oeu', 'Oeu032535.1' => 'oeu', 'Oeu034151.1' => 'oeu', 'Oeu034152.1' => 'oeu', 'Oeu034588.2' => 'oeu', 'Oeu050846.1' => 'oeu', 'Oeu050849.2' => 'oeu', 'Oeu051063.2' => 'oeu', 'Oeu052368.1' => 'oeu', 'Oeu052370.1' => 'oeu', 'Os01g0210400' => 'osa', 'Os01g0304300' => 'osa', 'Os01g0749100' => 'osa', 'Os02g0745800' => 'osa', 'Os03g0769050' => 'osa', 'Os05g0531500' => 'osa', 'Os06g0724300' => 'osa', 'Os11g0198100' => 'osa', 'Peaxi162Scf00069g01425' => 'pax', 'Peaxi162Scf00280g00811' => 'pax', 'Peaxi162Scf00310g00615' => 'pax', 'Peaxi162Scf00362g00542' => 'pax', 'Peaxi162Scf00461g00310' => 'pax', 'Peaxi162Scf00530g00118' => 'pax', 'Peaxi162Scf00541g00057' => 'pax', 'Peaxi162Scf00661g00017' => 'pax', 'Peaxi162Scf00926g00027' => 'pax', 'Peaxi162Scf01064g00263' => 'pax', 'Peaxi162Scf01211g00135' => 'pax', 'PGR004G2336' => 'pgr', 'PGR042G0327' => 'pgr', 'PGR042G1957' => 'pgr', 'PGR042G2003' => 'pgr', 'PGR042G3929' => 'pgr', 'PGR083G1137' => 'pgr', 'PGR083G1364' => 'pgr', 'PGSC0003DMG400003381' => 'stu', 'PGSC0003DMG400003417' => 'stu', 'PGSC0003DMG400008981' => 'stu', 'PGSC0003DMG400012417' => 'stu', 'PGSC0003DMG400012823' => 'stu', 'PGSC0003DMG400016885' => 'stu', 'PGSC0003DMG400022812' => 'stu', 'PGSC0003DMG400029726' => 'stu', 'PGSC0003DMG401009243' => 'stu', 'PGSC0003DMG401031505' => 'stu', 'PGSC0003DMG402031505' => 'stu', 'Phvul.001G017600' => 'pvu', 'Phvul.002G193500' => 'pvu', 'Phvul.002G228900' => 'pvu', 'Phvul.002G236800' => 'pvu', 'Phvul.003G049500' => 'pvu', 'Phvul.005G072000' => 'pvu', 'Phvul.006G164800' => 'pvu', 'Phvul.006G185100' => 'pvu', 'Phvul.007G090000' => 'pvu', 'Potri.001G399800' => 'ptr', 'Potri.002G149900' => 'ptr', 'Potri.004G044100' => 'ptr', 'Potri.004G177600' => 'ptr', 'Potri.009G138000' => 'ptr', 'Potri.010G094000' => 'ptr', 'Potri.011G053000' => 'ptr', 'Potri.011G119300' => 'ptr', 'Potri.013G113700' => 'ptr', 'Potri.018G107800' => 'ptr', 'Potri.019G084100' => 'ptr', 'Pp3c14_23720' => 'ppa', 'Pp3c16_6340' => 'ppa', 'Pp3c23_13420' => 'ppa', 'Pp3c24_2740' => 'ppa', 'Pp3c25_860' => 'ppa', 'Pp3c8_21750' => 'ppa', 'Prupe.1G273000' => 'ppe', 'Prupe.1G273700' => 'ppe', 'Prupe.1G274100' => 'ppe', 'Prupe.2G023300' => 'ppe', 'Prupe.4G048000' => 'ppe', 'Prupe.4G080400' => 'ppe', 'Prupe.4G181200' => 'ppe', 'Prupe.8G056900' => 'ppe', 'Prupe.8G168700' => 'ppe', 'Psat1g189080' => 'psa', 'Psat1g204760' => 'psa', 'Psat4g175560' => 'psa', 'Psat4g177720' => 'psa', 'Psat5g244240' => 'psa', 'Psat6g010720' => 'psa', 'Psat6g187200' => 'psa', 'Psat7g072040' => 'psa', 'PSO017G3501' => 'pso', 'PSO063G2148' => 'pso', 'PSO063G5608' => 'pso', 'PSO210G6392' => 'pso', 'PSO541G2319' => 'pso', 'PSO541G2836' => 'pso', 'PSO541G4012' => 'pso', 'PSO541G6253' => 'pso', 'PSO675G0580' => 'pso', 'PSO675G0856' => 'pso', 'PSO675G5635' => 'pso', 'PSO675G9157' => 'pso', 'PSO832G1660' => 'pso', 'PSO832G1969' => 'pso', 'QL02p007186' => 'qlo', 'QL02p033904' => 'qlo', 'QL03p064391' => 'qlo', 'QL05p040593' => 'qlo', 'QL05p058242' => 'qlo', 'QL08p021825' => 'qlo', 'QL11p004981' => 'qlo', 'RcHm_v2.0_Chr1g0318301' => 'rch', 'RcHm_v2.0_Chr4g0418501' => 'rch', 'RcHm_v2.0_Chr4g0439971' => 'rch', 'RcHm_v2.0_Chr5g0008541' => 'rch', 'RcHm_v2.0_Chr5g0014101' => 'rch', 'RcHm_v2.0_Chr5g0014131' => 'rch', 'RcHm_v2.0_Chr5g0033621' => 'rch', 'RcHm_v2.0_Chr6g0272041' => 'rch', 'RcHm_v2.0_Chr6g0278831' => 'rch', 'Rhsim02G0130400' => 'rsi', 'Rhsim02G0171100' => 'rsi', 'Rhsim05G0053000' => 'rsi', 'Rhsim05G0053100' => 'rsi', 'Rhsim06G0096500' => 'rsi', 'Rhsim06G0096600' => 'rsi', 'Rhsim06G0199100' => 'rsi', 'Rhsim12G0062300' => 'rsi', 'Rhsim12G0062800' => 'rsi', 'Sabra02G0118600' => 'sbr', 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'Solyc03g079860.2' => 'sly', 'Solyc04g079770.3' => 'sly', 'Solyc05g007430.4' => 'sly', 'Solyc07g063150.3' => 'sly', 'Solyc08g016620.3' => 'sly', 'Solyc09g057590.3' => 'sly', 'Solyc09g057600.1' => 'sly', 'Solyc10g009050.3' => 'sly', 'Solyc11g017420.2' => 'sly', 'Sopen01g053810' => 'spe', 'Sopen02g023040' => 'spe', 'Sopen03g002440' => 'spe', 'Sopen04g033350' => 'spe', 'Sopen05g003310' => 'spe', 'Sopen07g004050' => 'spe', 'Sopen07g031340' => 'spe', 'Sopen08g006990' => 'spe', 'Sopen10g004830' => 'spe', 'Sopen11g009370' => 'spe', 'Sp1g24450' => 'spa', 'Sp1g29670' => 'spa', 'Sp1g39600' => 'spa', 'Sp2g11080' => 'spa', 'Sp2g13970' => 'spa', 'Sp4g16130' => 'spa', 'Sp6g13080' => 'spa', 'Sp7g37270' => 'spa', 'TAR371G0065' => 'tar', 'TAR376G0340' => 'tar', 'TAR376G0435' => 'tar', 'TAR381G0002' => 'tar', 'TAR381G1236' => 'tar', 'TAR624G0055' => 'tar', 'TAR624G0324' => 'tar', 'TAR624G0696' => 'tar', 'TAR624G0906' => 'tar', 'TAR625G0107' => 'tar', 'TAR626G0015' => 'tar', 'TAR626G1356' => 'tar', 'TAR627G0888' => 'tar', 'TAR628G0399' => 'tar', 'TAR628G1327' => 'tar', 'TAR629G2831' => 'tar', 'TAR629G2874' => 'tar', 'TAR633G1432' => 'tar', 'TAR633G2771' => 'tar', 'THA.LOC104803394' => 'tha', 'THA.LOC104805153' => 'tha', 'THA.LOC104806784' => 'tha', 'THA.LOC104810473' => 'tha', 'THA.LOC104813100' => 'tha', 'THA.LOC104814215' => 'tha', 'THA.LOC104815554' => 'tha', 'THA.LOC104820544' => 'tha', 'THA.LOC104824754' => 'tha', 'THA.LOC104827717' => 'tha', 'Thecc.02G031400' => 'tca', 'Thecc.02G055900' => 'tca', 'Thecc.02G350800' => 'tca', 'Thecc.06G150900' => 'tca', 'Thecc.06G186600' => 'tca', 'Thecc.07G089600' => 'tca', 'Thecc.08G020400' => 'tca', 'Thecc.08G182100' => 'tca', 'Thhalv10000873m.g' => 'esa', 'Thhalv10004185m.g' => 'esa', 'Thhalv10006981m.g' => 'esa', 'Thhalv10007204m.g' => 'esa', 'Thhalv10011374m.g' => 'esa', 'Thhalv10013482m.g' => 'esa', 'Thhalv10017801m.g' => 'esa', 'Thhalv10024983m.g' => 'esa', 'TPR.G12072' => 'tpr', 'TPR.G15769' => 'tpr', 'TPR.G16504' => 'tpr', 'TPR.G16506' => 'tpr', 'TPR.G24345' => 'tpr', 'TPR.G26666' => 'tpr', 'TPR.G27320' => 'tpr', 'TPR.G31819' => 'tpr', 'TPR.G38879' => 'tpr', 'TPR.G39015' => 'tpr', 'TPR.G8819' => 'tpr', 'TWI09G0924' => 'twi', 'TWI12G0811' => 'twi', 'TWI12G1294' => 'twi', 'TWI31G0150' => 'twi', 'TWI36G1262' => 'twi', 'TWI38G1287' => 'twi', 'TWI38G1633' => 'twi', 'TWI38G1982' => 'twi', 'TWI39G0116' => 'twi', 'TWI60G1011' => 'twi', 'TWI63G0171' => 'twi', 'TWI73G0839' => 'twi', 'TWI79G1511' => 'twi', 'unitig_0.g915' => 'ugi', 'unitig_0.g916' => 'ugi', 'unitig_21.g20219' => 'ugi', 'unitig_21.g20416' => 'ugi', 'unitig_578.g16132' => 'ugi', 'unitig_578.g16718' => 'ugi', 'unitig_62.g23481' => 'ugi', 'unitig_744.g24535' => 'ugi', 'unitig_749.g13525' => 'ugi', 'vmacro01248' => 'vma', 'vmacro02290' => 'vma', 'vmacro10946' => 'vma', 'vmacro11865' => 'vma', 'vmacro12493' => 'vma', 'vmacro17322' => 'vma', 'vmacro21599' => 'vma', 'vmacro23041' => 'vma', 'VMungo0251G0004' => 'vmu', 'VMungo0251G2639' => 'vmu', 'VMungo0251G2967' => 'vmu', 'VMungo0540G0864' => 'vmu', 'VMungo0540G1569' => 'vmu', 'VMungo0647G0317' => 'vmu', 'VMungo0720G1373' => 'vmu', 'VMungo0720G1508' => 'vmu', 'VMungo1080G0485' => 'vmu', 'VMungo1215G3177' => 'vmu', 'Zm00001eb112600' => 'zma', 'Zm00001eb120220' => 'zma', 'Zm00001eb153240' => 'zma', 'Zm00001eb168880' => 'zma', 'Zm00001eb213920' => 'zma', 'Zm00001eb228280' => 'zma', 'Zm00001eb254580' => 'zma', 'Zm00001eb272180' => 'zma', 'Zm00001eb293190' => 'zma', 'Zm00001eb322930' => 'zma', 'Zm00001eb353360' => 'zma', 'Zm00001eb353390' => 'zma', 'Zm00001eb353430' => 'zma', 'Zm00001eb353440' => 'zma', 'Zm00001eb353780' => 'zma' ), 'gf_id' => 'HOM05D000499', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000499' ), 'data_identifier' => 'HOM05D000499', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000499', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1066', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p29780' => 'bna', 'A02p33180' => 'bna', 'A03p16470' => 'bna', 'A03p66010' => 'bna', 'A04p25970' => 'bna', 'A06p01270' => 'bna', 'A06p46080' => 'bna', 'A07p11400' => 'bna', 'A08p01840' => 'bna', 'A08p08230' => 'bna', 'A08p25740' => 'bna', 'A09p32070' => 'bna', 'A09p37830' => 'bna', 'A09p42840' => 'bna', 'A09p42850' => 'bna', 'Aa31LG10G2060' => 'aar', 'Aa31LG2G7410' => 'aar', 'Aa31LG6G10200' => 'aar', 'Aa31LG6G16680' => 'aar', 'Aa31LG6G8470' => 'aar', 'Aa31LG9G12730' => 'aar', 'Aa31LG9G13680' => 'aar', 'Aa31LG9G14920' => 'aar', 'Aa31LG9G6650' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4977' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5467' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3254' => 'aag', 'Actinidia02578' => 'ach', 'Actinidia07693' => 'ach', 'Actinidia08413' => 'ach', 'Actinidia08414' => 'ach', 'Actinidia15289' => 'ach', 'Actinidia19871' => 'ach', 'Actinidia21475' => 'ach', 'Actinidia22576' => 'ach', 'Actinidia28327' => 'ach', 'Actinidia32491' => 'ach', 'Actinidia39463' => 'ach', 'Actinidia39571' => 'ach', 'Ah.01g013750' => 'amhyb', 'Ah.01g023210' => 'amhyb', 'Ah.04g164850' => 'amhyb', 'Ah.05g178060' => 'amhyb', 'Ah.07g204270' => 'amhyb', 'Ah.07g208480' => 'amhyb', 'Ah.09g237410' => 'amhyb', 'Ah.14g089460' => 'amhyb', 'AL1G41790' => 'aly', 'AL1G49050' => 'aly', 'AL1G53810' => 'aly', 'AL1G61400' => 'aly', 'AL4G18580' => 'aly', 'AL5G12510' => 'aly', 'AL5G12540' => 'aly', 'AL6G43230' => 'aly', 'AL7G10370' => 'aly', 'AL7G19250' => 'aly', 'AL8G12240' => 'aly', 'AL8G18540' => 'aly', 'Aqoxy1G02409' => 'aox', 'Aqoxy2G03993' => 'aox', 'Aqoxy3G03357' => 'aox', 'Aqoxy4G00785' => 'aox', 'Aqoxy5G02598' => 'aox', 'Aqoxy6G00132' => 'aox', 'Aqoxy7G01776' => 'aox', 'Aqoxy7G02316' => 'aox', 'Aqoxy7G03973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.12AFKW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B8730' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27IQR1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3F75VG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3RE0GA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41TCQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.527VTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FIR39' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5W8UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DA38EV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ63HS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H1I32C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HC27T5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4M8AP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7N3CZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9UVDZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LS1NQA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT1D4B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SKC4TM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCFV76' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF9Q1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQWD9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1ZM88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WE07RT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YCK7VH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJE6Q6' => 'arhy', 'AT1G28240' => 'ath', 'AT1G34550' => 'ath', 'AT1G53040' => 'ath', 'AT2G02910' => 'ath', 'AT4G09630' => 'ath', 'AT4G38500' => 'ath', 'AT5G42660' => 'ath', 'AT5G46220' => 'ath', 'ATR0152G026' => 'atr', 'ATR0564G343' => 'atr', 'ATR0706G151' => 'atr', 'ATR0733G207' => 'atr', 'ATR0751G234' => 'atr', 'ATR0807G048' => 'atr', 'ATR1091G084' => 'atr', 'Atru.chr10.1229' => 'acertr', 'Atru.chr10.1230' => 'acertr', 'Atru.chr10.1874' => 'acertr', 'Atru.chr11.1808' => 'acertr', 'Atru.chr13.1795' => 'acertr', 'Atru.chr13.570' => 'acertr', 'Atru.chr2.2608' => 'acertr', 'Atru.chr2.2609' => 'acertr', 'Atru.chr5.3428' => 'acertr', 'Atru.chr8.1171' => 'acertr', 'AUR62004651' => 'cqu', 'AUR62008675' => 'cqu', 'AUR62010014' => 'cqu', 'AUR62013004' => 'cqu', 'AUR62014825' => 'cqu', 'AUR62015015' => 'cqu', 'AUR62015151' => 'cqu', 'AUR62017020' => 'cqu', 'AUR62019422' => 'cqu', 'AUR62023570' => 'cqu', 'AUR62025571' => 'cqu', 'AUR62029098' => 'cqu', 'AUR62033863' => 'cqu', 'AUR62034296' => 'cqu', 'AUR62040075' => 'cqu', 'BcaB02g07334' => 'bca', 'BcaB02g10575' => 'bca', 'BcaB03g12119' => 'bca', 'BcaB03g12120' => 'bca', 'BcaB03g13945' => 'bca', 'BcaB04g17123' => 'bca', 'BcaB04g17867' => 'bca', 'BcaB04g19839' => 'bca', 'BcaB07g30317' => 'bca', 'BcaB07g32432' => 'bca', 'BcaB07g33362' => 'bca', 'BcaB08g36611' => 'bca', 'BcaC01g00028' => 'bca', 'BcaC01g01356' => 'bca', 'BcaC01g02034' => 'bca', 'BcaC01g06051' => 'bca', 'BcaC03g16839' => 'bca', 'BcaC03g17176' => 'bca', 'BcaC05g26829' => 'bca', 'BcaC06g31490' => 'bca', 'BcaC06g35344' => 'bca', 'BcaC06g36570' => 'bca', 'BcaC07g37537' => 'bca', 'BcaC08g43491' => 'bca', 'BcaC08g43773' => 'bca', 'BcaNung00234' => 'bca', 'BcaNung01982' => 'bca', 'BcaNung03707' => 'bca', 'BcaNung06454' => 'bca', 'BolC2t10762H' => 'bol', 'BolC2t11191H' => 'bol', 'BolC3t14322H' => 'bol', 'BolC3t19747H' => 'bol', 'BolC3t21425H' => 'bol', 'BolC4t27800H' => 'bol', 'BolC5t31423H' => 'bol', 'BolC6t35951H' => 'bol', 'BolC6t36282H' => 'bol', 'BolC7t40678H' => 'bol', 'BolC7t40679H' => 'bol', 'BolC7t42222H' => 'bol', 'BolC7t43492H' => 'bol', 'BolC7t46785H' => 'bol', 'BolC8t47853H' => 'bol', 'BolC9t56805H' => 'bol', 'BraA02t08000Z' => 'bra', 'BraA02t08341Z' => 'bra', 'BraA03t10936Z' => 'bra', 'BraA03t15657Z' => 'bra', 'BraA04t18100Z' => 'bra', 'BraA05t20523Z' => 'bra', 'BraA06t23353Z' => 'bra', 'BraA06t27473Z' => 'bra', 'BraA06t27769Z' => 'bra', 'BraA07t28928Z' => 'bra', 'BraA08t32236Z' => 'bra', 'BraA08t32841Z' => 'bra', 'BraA08t34524Z' => 'bra', 'BraA09t38742Z' => 'bra', 'BraA09t39295Z' => 'bra', 'C02p47180' => 'bna', 'C02p50990' => 'bna', 'C03p19360' => 'bna', 'C03p74950' => 'bna', 'C03p91000' => 'bna', 'C04p63260' => 'bna', 'C05p27050' => 'bna', 'C06p08750' => 'bna', 'C06p11490' => 'bna', 'C07p02820' => 'bna', 'C07p17180' => 'bna', 'C07p29440' => 'bna', 'C07p63730' => 'bna', 'C09p39260' => 'bna', 'CAN.G1164.34' => 'can', 'CAN.G1164.39' => 'can', 'CAN.G1530.3' => 'can', 'CAN.G162.61' => 'can', 'CAN.G176.6' => 'can', 'CAN.G289.49' => 'can', 'CAN.G370.21' => 'can', 'CAN.G370.22' => 'can', 'CAN.G371.117' => 'can', 'CAN.G58.37' => 'can', 'CAN.G588.98' => 'can', 'CANSAT21G2266' => 'cansat', 'CANSAT25G2799' => 'cansat', 'CANSAT35G0862' => 'cansat', 'CANSAT35G1704' => 'cansat', 'CANSAT35G1760' => 'cansat', 'CANSAT56G3971' => 'cansat', 'CANSAT56G4116' => 'cansat', 'CANSAT80G1259' => 'cansat', 'CARHR027730' => 'chi', 'CARHR033880' => 'chi', 'CARHR043270' => 'chi', 'CARHR145330' => 'chi', 'CARHR145340' => 'chi', 'CARHR175570' => 'chi', 'CARHR181570' => 'chi', 'CARHR258470' => 'chi', 'CARHR260490' => 'chi', 'CARHR294220' => 'chi', 'Carub.0001s2668' => 'cru', 'Carub.0001s3257' => 'cru', 'Carub.0001s4220' => 'cru', 'Carub.0005s0179' => 'cru', 'Carub.0006s2807' => 'cru', 'Carub.0007s0039' => 'cru', 'Carub.0008s0169' => 'cru', 'Carub.0008s0636' => 'cru', 'Ca_00338_v3' => 'car', 'Ca_00542_v3' => 'car', 'Ca_01844_v3' => 'car', 'Ca_10611_v3' => 'car', 'Ca_13326_v3' => 'car', 'Ca_17944_v3' => 'car', 'Ca_18546_v3' => 'car', 'Ca_24219_v3' => 'car', 'Ca_29972_v3' => 'car', 'CBR_g3681' => 'cbr', 'CBR_g40021' => 'cbr', 'Cc01_g08140' => 'ccan', 'Cc02_g13410' => 'ccan', 'Cc02_g37480' => 'ccan', 'Cc05_g12030' => 'ccan', 'Cc09_g03370' => 'ccan', 'Cc09_g10300' => 'ccan', 'Cc10_g03530' => 'ccan', 'Cc10_g11380' => 'ccan', 'CDE01G0176' => 'cde', 'CDE02G0675' => 'cde', 'CDE02G0942' => 'cde', 'CDE02G1153' => 'cde', 'CDE02G4177' => 'cde', 'CDE04G2117' => 'cde', 'CDE04G2736' => 'cde', 'CDE08G1161' => 'cde', 'CDE09G1238' => 'cde', 'Cfa000467' => 'cfa', 'Cfa000947' => 'cfa', 'Cfa004969' => 'cfa', 'Cfa005284' => 'cfa', 'Cfa008993' => 'cfa', 'Cfa018187' => 'cfa', 'Cfa018454' => 'cfa', 'Cfa020585' => 'cfa', 'Ciclev10000424m.g' => 'ccl', 'Ciclev10003605m.g' => 'ccl', 'Ciclev10007828m.g' => 'ccl', 'Ciclev10014620m.g' => 'ccl', 'Ciclev10015169m.g' => 'ccl', 'Ciclev10018291m.g' => 'ccl', 'Ciclev10028256m.g' => 'ccl', 'Ciclev10033822m.g' => 'ccl', 'CiPaw.05G060300' => 'cil', 'CiPaw.05G085000' => 'cil', 'CiPaw.06G083700' => 'cil', 'CiPaw.06G120300' => 'cil', 'CiPaw.09G060500' => 'cil', 'CiPaw.09G123800' => 'cil', 'CiPaw.11G169700' => 'cil', 'CiPaw.12G118300' => 'cil', 'CiPaw.15G071000' => 'cil', 'CiPaw.15G081900' => 'cil', 'ClCG01G024610' => 'cla', 'ClCG03G006070' => 'cla', 'ClCG05G019250' => 'cla', 'ClCG09G009500' => 'cla', 'ClCG11G008200' => 'cla', 'ClCG11G018080' => 'cla', 'COL.COLO4_17373' => 'col', 'COL.COLO4_22994' => 'col', 'COL.COLO4_26389' => 'col', 'COL.COLO4_27170' => 'col', 'COL.COLO4_31074' => 'col', 'COL.COLO4_31465' => 'col', 'COL.COLO4_36438' => 'col', 'COL.COLO4_36439' => 'col', 'Cpa.g.c38781' => 'cpa', 'Cpa.g.sc128.12' => 'cpa', 'Cpa.g.sc166.7' => 'cpa', 'Cpa.g.sc166.8' => 'cpa', 'Cpa.g.sc20.111' => 'cpa', 'Cpa.g.sc27.31' => 'cpa', 'Cpa.g.sc64.36' => 'cpa', 'Cpa.g.sc64.37' => 'cpa', 'Cpa.g.sc66.49' => 'cpa', 'Cpa.g.sc80.64' => 'cpa', 'CsaV3_1G012320' => 'csa', 'CsaV3_2G008480' => 'csa', 'CsaV3_2G033450' => 'csa', 'CsaV3_3G044830' => 'csa', 'CsaV3_4G033710' => 'csa', 'CsaV3_6G051730' => 'csa', 'CsaV3_7G025350' => 'csa', 'CSS0001067' => 'camsi', 'CSS0005996' => 'camsi', 'CSS0006590' => 'camsi', 'CSS0009673' => 'camsi', 'CSS0010201' => 'camsi', 'CSS0010549' => 'camsi', 'CSS0011364' => 'camsi', 'CSS0014473' => 'camsi', 'CSS0014961' => 'camsi', 'CSS0020191' => 'camsi', 'CSS0021165' => 'camsi', 'CSS0022306' => 'camsi', 'CSS0030591' => 'camsi', 'CSS0030696' => 'camsi', 'CSS0032653' => 'camsi', 'CSS0037487' => 'camsi', 'CSS0041102' => 'camsi', 'CSS0041261' => 'camsi', 'CSS0046246' => 'camsi', 'CSS0049256' => 'camsi', 'DCAR_004075' => 'dca', 'DCAR_011538' => 'dca', 'DCAR_019553' => 'dca', 'DCAR_020952' => 'dca', 'DCAR_021739' => 'dca', 'DCAR_027407' => 'dca', 'DCAR_027913' => 'dca', 'DCAR_028066' => 'dca', 'Dinv05899' => 'din', 'Dinv07563' => 'din', 'Dinv08010' => 'din', 'Dinv14125' => 'din', 'Dinv20172' => 'din', 'Dinv30743' => 'din', 'Dinv31229' => 'din', 'Dinv34162' => 'din', 'Dinv36028' => 'din', 'Dinv39368' => 'din', 'Dinv40565' => 'din', 'Dinv41706' => 'din', 'Duzib052G0089' => 'dzi', 'Duzib116G0641' => 'dzi', 'Duzib132G0069' => 'dzi', 'Duzib132G1219' => 'dzi', 'Duzib147G0278' => 'dzi', 'Duzib160G0480' => 'dzi', 'Duzib170G0661' => 'dzi', 'Duzib177G0591' => 'dzi', 'Duzib187G1353' => 'dzi', 'Duzib192G0858' => 'dzi', 'Duzib192G0883' => 'dzi', 'Duzib213G0506' => 'dzi', 'Duzib235G0289' => 'dzi', 'Duzib251G0422' => 'dzi', 'ECA232G3898' => 'eca', 'ECA233G5950' => 'eca', 'ECA234G1699' => 'eca', 'ECA234G2421' => 'eca', 'ECA236G0426' => 'eca', 'ECA236G4331' => 'eca', 'ECA248G2573' => 'eca', 'EL10Ac1g00077' => 'bvu', 'EL10Ac1g01746' => 'bvu', 'EL10Ac2g03464' => 'bvu', 'EL10Ac4g08176' => 'bvu', 'EL10Ac7g17521' => 'bvu', 'EL10Ac8g20386' => 'bvu', 'EL10Ac9g21343' => 'bvu', 'EL10Ac9g22688' => 'bvu', 'Eucgr.B03434' => 'egr', 'Eucgr.D00618' => 'egr', 'Eucgr.E02395' => 'egr', 'Eucgr.F01129' => 'egr', 'Eucgr.F02622' => 'egr', 'Eucgr.F04207' => 'egr', 'FAN01G0570' => 'fan', 'FAN03G3351' => 'fan', 'FAN06G3702' => 'fan', 'FAN07G2149' => 'fan', 'FAN10G3758' => 'fan', 'FAN11G1170' => 'fan', 'FAN11G2050' => 'fan', 'FAN11G2724' => 'fan', 'FAN12G1700' => 'fan', 'FAN12G2028' => 'fan', 'FAN15G1160' => 'fan', 'FAN15G3063' => 'fan', 'FAN16G2540' => 'fan', 'FAN16G3077' => 'fan', 'FAN16G3624' => 'fan', 'FAN17G0221' => 'fan', 'FAN20G2492' => 'fan', 'FAN20G2905' => 'fan', 'FAN21G0548' => 'fan', 'FAN21G1300' => 'fan', 'FAN22G0077' => 'fan', 'FAN22G1315' => 'fan', 'FAN24G1280' => 'fan', 'FAN24G1445' => 'fan', 'FAN24G3527' => 'fan', 'FAN25G0464' => 'fan', 'FAN25G2885' => 'fan', 'FAN25G3270' => 'fan', 'FAN27G1101' => 'fan', 'FAN27G2846' => 'fan', 'FAN27G3524' => 'fan', 'FvH4_2g11770' => 'fve', 'FvH4_2g15630' => 'fve', 'FvH4_3g05570' => 'fve', 'FvH4_3g09110' => 'fve', 'FvH4_3g19940' => 'fve', 'FvH4_4g04821' => 'fve', 'FvH4_4g31480' => 'fve', 'FvH4_7g01740' => 'fve', 'Glyma.05G130400' => 'gma', 'Glyma.05G156400' => 'gma', 'Glyma.07G197000' => 'gma', 'Glyma.08G085151' => 'gma', 'Glyma.08G114500' => 'gma', 'Glyma.08G300400' => 'gma', 'Glyma.10G215800' => 'gma', 'Glyma.12G224400' => 'gma', 'Glyma.13G179300' => 'gma', 'Glyma.13G218151' => 'gma', 'Glyma.13G238800' => 'gma', 'Glyma.13G276900' => 'gma', 'Glyma.14G078200' => 'gma', 'Glyma.15G074500' => 'gma', 'Glyma.15G094100' => 'gma', 'Glyma.17G247200' => 'gma', 'Glyma.18G120100' => 'gma', 'Glyma.20G176000' => 'gma', 'Gohir.A01G063600' => 'ghi', 'Gohir.A01G170301' => 'ghi', 'Gohir.A02G060500' => 'ghi', 'Gohir.A05G133850' => 'ghi', 'Gohir.A05G161400' => 'ghi', 'Gohir.A06G012900' => 'ghi', 'Gohir.A06G035901' => 'ghi', 'Gohir.A06G127100' => 'ghi', 'Gohir.A06G210500' => 'ghi', 'Gohir.A08G008650' => 'ghi', 'Gohir.A09G072700' => 'ghi', 'Gohir.A09G088301' => 'ghi', 'Gohir.A10G040600' => 'ghi', 'Gohir.A12G036300' => 'ghi', 'Gohir.A12G143350' => 'ghi', 'Gohir.A12G165500' => 'ghi', 'Gohir.A13G145700' => 'ghi', 'Gohir.D01G050000' => 'ghi', 'Gohir.D01G051366' => 'ghi', 'Gohir.D01G161350' => 'ghi', 'Gohir.D02G065900' => 'ghi', 'Gohir.D05G164200' => 'ghi', 'Gohir.D05G355500' => 'ghi', 'Gohir.D06G010400' => 'ghi', 'Gohir.D06G111250' => 'ghi', 'Gohir.D06G132000' => 'ghi', 'Gohir.D06G210500' => 'ghi', 'Gohir.D07G165675' => 'ghi', 'Gohir.D08G062240' => 'ghi', 'Gohir.D08G086101' => 'ghi', 'Gohir.D08G138060' => 'ghi', 'Gohir.D09G072300' => 'ghi', 'Gohir.D10G041400' => 'ghi', 'Gohir.D11G191020' => 'ghi', 'Gohir.D11G212066' => 'ghi', 'Gohir.D12G036300' => 'ghi', 'Gohir.D12G168600' => 'ghi', 'Gohir.D13G150600' => 'ghi', 'Gorai.001G057300' => 'gra', 'Gorai.002G069900' => 'gra', 'Gorai.002G200000' => 'gra', 'Gorai.003G067600' => 'gra', 'Gorai.005G074800' => 'gra', 'Gorai.006G087300' => 'gra', 'Gorai.008G037500' => 'gra', 'Gorai.008G181400' => 'gra', 'Gorai.009G169400' => 'gra', 'Gorai.009G387900' => 'gra', 'Gorai.010G013300' => 'gra', 'Gorai.010G153800' => 'gra', 'Gorai.010G255800' => 'gra', 'Gorai.011G043700' => 'gra', 'Gorai.011G198900' => 'gra', 'Gorai.013G168400' => 'gra', 'GSVIVG01005212001' => 'vvi', 'GSVIVG01006163001' => 'vvi', 'GSVIVG01009625001' => 'vvi', 'GSVIVG01014338001' => 'vvi', 'GSVIVG01020005001' => 'vvi', 'GSVIVG01021450001' => 'vvi', 'GSVIVG01023975001' => 'vvi', 'GSVIVG01034490001' => 'vvi', 'HanXRQChr04g0112071' => 'han', 'HanXRQChr05g0131151' => 'han', 'HanXRQChr09g0262371' => 'han', 'HanXRQChr09g0268401' => 'han', 'HanXRQChr10g0279241' => 'han', 'HanXRQChr10g0297961' => 'han', 'HanXRQChr11g0326231' => 'han', 'HanXRQChr11g0328471' => 'han', 'HanXRQChr16g0507941' => 'han', 'HanXRQChr17g0560211' => 'han', 'Haze_02108' => 'cav', 'Haze_02428' => 'cav', 'Haze_05593' => 'cav', 'Haze_06448' => 'cav', 'Haze_09427' => 'cav', 'Haze_12022' => 'cav', 'Haze_17612' => 'cav', 'Haze_17928' => 'cav', 'Hma1.2p1_0032F.1_g019250' => 'hma', 'Hma1.2p1_0163F.1_g072690' => 'hma', 'Hma1.2p1_0265F.1_g106710' => 'hma', 'Hma1.2p1_0286F.1_g113970' => 'hma', 'Hma1.2p1_0363F.1_g136640' => 'hma', 'Hma1.2p1_0584F.1_g183470' => 'hma', 'Hma1.2p1_0885F.1_g232570' => 'hma', 'HPP92_006022' => 'vpl', 'HPP92_007320' => 'vpl', 'HPP92_011521' => 'vpl', 'HPP92_019387' => 'vpl', 'HPP92_024038' => 'vpl', 'Hund05891' => 'sun', 'Hund06450' => 'sun', 'Hund12053' => 'sun', 'Hund16800' => 'sun', 'Hund21222' => 'sun', 'Hund22896' => 'sun', 'Hund23746' => 'sun', 'Hund27083' => 'sun', 'Lalb_Chr02g0141831' => 'lal', 'Lalb_Chr02g0141841' => 'lal', 'Lalb_Chr05g0220411' => 'lal', 'Lalb_Chr06g0162081' => 'lal', 'Lalb_Chr09g0327651' => 'lal', 'Lalb_Chr13g0295051' => 'lal', 'Lalb_Chr15g0086801' => 'lal', 'Lalb_Chr16g0383781' => 'lal', 'Lalb_Chr16g0383791' => 'lal', 'Lalb_Chr18g0055441' => 'lal', 'Lalb_Chr18g0059611' => 'lal', 'Lalb_Chr20g0109661' => 'lal', 'Lalb_Chr20g0109831' => 'lal', 'Lalb_Chr20g0121871' => 'lal', 'Lalb_Chr22g0355361' => 'lal', 'Lalb_Chr25g0286371' => 'lal', 'Lj1A1187G43' => 'lonja', 'Lj1A1205T50' => 'lonja', 'Lj1A800G33' => 'lonja', 'Lj1C1187T7' => 'lonja', 'Lj1C843T11' => 'lonja', 'Lj1g0010940' => 'lja', 'Lj2A288T69' => 'lonja', 'Lj3g0024276' => 'lja', 'Lj4A47T76' => 'lonja', 'Lj4g0005805' => 'lja', 'Lj4g0006097' => 'lja', 'Lj4g0008528' => 'lja', 'Lj4g0024907' => 'lja', 'Lj5g0012472' => 'lja', 'Lj5g0018648' => 'lja', 'Lj6C789G1' => 'lonja', 'Lj6g0004000' => 'lja', 'Lj7A292G67' => 'lonja', 'Lj7A292T64' => 'lonja', 'Lj9A400T58' => 'lonja', 'Lsat_1_v5_gn_1_126181' => 'lsa', 'Lsat_1_v5_gn_4_123041' => 'lsa', 'Lsat_1_v5_gn_4_133620' => 'lsa', 'Lsat_1_v5_gn_4_53221' => 'lsa', 'Lsat_1_v5_gn_4_71961' => 'lsa', 'Lsat_1_v5_gn_7_105241' => 'lsa', 'Lsat_1_v5_gn_7_21361' => 'lsa', 'Lsat_1_v5_gn_7_28860' => 'lsa', 'Lsat_1_v5_gn_7_31260' => 'lsa', 'Lsat_1_v5_gn_8_52801' => 'lsa', 'Manes.02G191400' => 'mes', 'Manes.03G110100' => 'mes', 'Manes.04G071100' => 'mes', 'Manes.05G100500' => 'mes', 'Manes.05G164700' => 'mes', 'Manes.15G087000' => 'mes', 'Manes.15G121500' => 'mes', 'Manes.16G028300' => 'mes', 'Manes.17G046100' => 'mes', 'Manes.17G069800' => 'mes', 'Manes.18G100500' => 'mes', 'Mapoly0002s0109' => 'mpo', 'Mapoly0024s0007' => 'mpo', 'Mapoly0089s0032' => 'mpo', 'MBI04_g42241_MAGBIO' => 'mbi', 'MBI05_g11988_MAGBIO' => 'mbi', 'MBI05_g35452_MAGBIO' => 'mbi', 'MBI07_g30179_MAGBIO' => 'mbi', 'MBI07_g35859_MAGBIO' => 'mbi', 'MBI07_g35860_MAGBIO' => 'mbi', 'MBI07_g37166_MAGBIO' => 'mbi', 'MBI08_g18172_MAGBIO' => 'mbi', 'MBI09_g08441_MAGBIO' => 'mbi', 'MBI13_g01676_MAGBIO' => 'mbi', 'MBI14_g42955_MAGBIO' => 'mbi', 'MBI16_g13161_MAGBIO' => 'mbi', 'MBI17_g27204_MAGBIO' => 'mbi', 'MBI19_g21595_MAGBIO' => 'mbi', 'MD00G1148400' => 'mdo', 'MD02G1301200' => 'mdo', 'MD03G1227800' => 'mdo', 'MD05G1041100' => 'mdo', 'MD05G1124800' => 'mdo', 'MD05G1284000' => 'mdo', 'MD05G1338800' => 'mdo', 'MD05G1338900' => 'mdo', 'MD07G1022800' => 'mdo', 'MD10G1047500' => 'mdo', 'MD10G1127500' => 'mdo', 'MD10G1262300' => 'mdo', 'MD10G1293800' => 'mdo', 'MD16G1074300' => 'mdo', 'Medtr1g021670' => 'mtr', 'Medtr1g096320' => 'mtr', 'Medtr2g013690' => 'mtr', 'Medtr2g019450' => 'mtr', 'Medtr2g085170' => 'mtr', 'Medtr4g088785' => 'mtr', 'Medtr8g055930' => 'mtr', 'Medtr8g085850' => 'mtr', 'MELO3C002605.2' => 'cme', 'MELO3C003891.2' => 'cme', 'MELO3C004012.2' => 'cme', 'MELO3C007134.2' => 'cme', 'MELO3C008118.2' => 'cme', 'MELO3C016700.2' => 'cme', 'MELO3C024127.2' => 'cme', 'MELO3C033361.2' => 'cme', 'MELO3C033362.2' => 'cme', 'Migut.C00430' => 'egut', 'Migut.C01246' => 'egut', 'Migut.E00101' => 'egut', 'Migut.H01486' => 'egut', 'Migut.H01939' => 'egut', 'Migut.K00360' => 'egut', 'Migut.M00910' => 'egut', 'Migut.M01139' => 'egut', 'Migut.N02677' => 'egut', 'MSTRG.13252' => 'ama', 'MSTRG.14701' => 'ama', 'MSTRG.1521' => 'ama', 'MSTRG.15884' => 'ama', 'MSTRG.16242' => 'ama', 'MSTRG.22285' => 'ama', 'MSTRG.22444' => 'ama', 'MSTRG.2349' => 'ama', 'MSTRG.26308' => 'ama', 'MSTRG.28296' => 'ama', 'MSTRG.9895' => 'ama', 'Nitab4.5_0000110g0060' => 'nta', 'Nitab4.5_0000420g0130' => 'nta', 'Nitab4.5_0000422g0030' => 'nta', 'Nitab4.5_0000560g0180' => 'nta', 'Nitab4.5_0000703g0100' => 'nta', 'Nitab4.5_0000786g0200' => 'nta', 'Nitab4.5_0001336g0020' => 'nta', 'Nitab4.5_0001796g0030' => 'nta', 'Nitab4.5_0003348g0060' => 'nta', 'Nitab4.5_0003698g0040' => 'nta', 'Nitab4.5_0003942g0090' => 'nta', 'Nitab4.5_0004775g0070' => 'nta', 'Nitab4.5_0004864g0030' => 'nta', 'Nitab4.5_0005615g0020' => 'nta', 'Nitab4.5_0009288g0030' => 'nta', 'Nitab4.5_0009341g0010' => 'nta', 'Nitab4.5_0009535g0010' => 'nta', 'Nn1g03995' => 'nnu', 'Nn1g04100' => 'nnu', 'Nn1g06530' => 'nnu', 'Nn3g16404' => 'nnu', 'Nn3g17212' => 'nnu', 'Nn3g20776' => 'nnu', 'Nn3g21923' => 'nnu', 'Nn5g27737' => 'nnu', 'Nn5g29461' => 'nnu', 'Nn7g38355' => 'nnu', 'Nn8g39873' => 'nnu', 'Oeu000548.2' => 'oeu', 'Oeu004672.1' => 'oeu', 'Oeu015605.2' => 'oeu', 'Oeu016092.1' => 'oeu', 'Oeu017879.3' => 'oeu', 'Oeu024910.1' => 'oeu', 'Oeu028965.1' => 'oeu', 'Oeu031269.1' => 'oeu', 'Oeu031270.1' => 'oeu', 'Oeu032535.1' => 'oeu', 'Oeu034151.1' => 'oeu', 'Oeu034152.1' => 'oeu', 'Oeu034588.2' => 'oeu', 'Oeu050846.1' => 'oeu', 'Oeu050849.2' => 'oeu', 'Oeu051063.2' => 'oeu', 'Oeu052368.1' => 'oeu', 'Oeu052370.1' => 'oeu', 'Os01g0210400' => 'osa', 'Os01g0304300' => 'osa', 'Os01g0749100' => 'osa', 'Os02g0745800' => 'osa', 'Os03g0769050' => 'osa', 'Os05g0531500' => 'osa', 'Os06g0724300' => 'osa', 'Os11g0198100' => 'osa', 'Peaxi162Scf00069g01425' => 'pax', 'Peaxi162Scf00280g00811' => 'pax', 'Peaxi162Scf00310g00615' => 'pax', 'Peaxi162Scf00362g00542' => 'pax', 'Peaxi162Scf00461g00310' => 'pax', 'Peaxi162Scf00530g00118' => 'pax', 'Peaxi162Scf00541g00057' => 'pax', 'Peaxi162Scf00661g00017' => 'pax', 'Peaxi162Scf00926g00027' => 'pax', 'Peaxi162Scf01064g00263' => 'pax', 'Peaxi162Scf01211g00135' => 'pax', 'PGR004G2336' => 'pgr', 'PGR042G0327' => 'pgr', 'PGR042G1957' => 'pgr', 'PGR042G2003' => 'pgr', 'PGR042G3929' => 'pgr', 'PGR083G1137' => 'pgr', 'PGR083G1364' => 'pgr', 'PGSC0003DMG400003381' => 'stu', 'PGSC0003DMG400003417' => 'stu', 'PGSC0003DMG400008981' => 'stu', 'PGSC0003DMG400012417' => 'stu', 'PGSC0003DMG400012823' => 'stu', 'PGSC0003DMG400016885' => 'stu', 'PGSC0003DMG400022812' => 'stu', 'PGSC0003DMG400029726' => 'stu', 'PGSC0003DMG401009243' => 'stu', 'PGSC0003DMG401031505' => 'stu', 'PGSC0003DMG402031505' => 'stu', 'Phvul.001G017600' => 'pvu', 'Phvul.002G193500' => 'pvu', 'Phvul.002G228900' => 'pvu', 'Phvul.002G236800' => 'pvu', 'Phvul.003G049500' => 'pvu', 'Phvul.005G072000' => 'pvu', 'Phvul.006G164800' => 'pvu', 'Phvul.006G185100' => 'pvu', 'Phvul.007G090000' => 'pvu', 'Potri.001G399800' => 'ptr', 'Potri.002G149900' => 'ptr', 'Potri.004G044100' => 'ptr', 'Potri.004G177600' => 'ptr', 'Potri.009G138000' => 'ptr', 'Potri.010G094000' => 'ptr', 'Potri.011G053000' => 'ptr', 'Potri.011G119300' => 'ptr', 'Potri.013G113700' => 'ptr', 'Potri.018G107800' => 'ptr', 'Potri.019G084100' => 'ptr', 'Pp3c14_23720' => 'ppa', 'Pp3c16_6340' => 'ppa', 'Pp3c23_13420' => 'ppa', 'Pp3c24_2740' => 'ppa', 'Pp3c25_860' => 'ppa', 'Pp3c8_21750' => 'ppa', 'Prupe.1G273000' => 'ppe', 'Prupe.1G273700' => 'ppe', 'Prupe.1G274100' => 'ppe', 'Prupe.2G023300' => 'ppe', 'Prupe.4G048000' => 'ppe', 'Prupe.4G080400' => 'ppe', 'Prupe.4G181200' => 'ppe', 'Prupe.8G056900' => 'ppe', 'Prupe.8G168700' => 'ppe', 'Psat1g189080' => 'psa', 'Psat1g204760' => 'psa', 'Psat4g175560' => 'psa', 'Psat4g177720' => 'psa', 'Psat5g244240' => 'psa', 'Psat6g010720' => 'psa', 'Psat6g187200' => 'psa', 'Psat7g072040' => 'psa', 'PSO017G3501' => 'pso', 'PSO063G2148' => 'pso', 'PSO063G5608' => 'pso', 'PSO210G6392' => 'pso', 'PSO541G2319' => 'pso', 'PSO541G2836' => 'pso', 'PSO541G4012' => 'pso', 'PSO541G6253' => 'pso', 'PSO675G0580' => 'pso', 'PSO675G0856' => 'pso', 'PSO675G5635' => 'pso', 'PSO675G9157' => 'pso', 'PSO832G1660' => 'pso', 'PSO832G1969' => 'pso', 'QL02p007186' => 'qlo', 'QL02p033904' => 'qlo', 'QL03p064391' => 'qlo', 'QL05p040593' => 'qlo', 'QL05p058242' => 'qlo', 'QL08p021825' => 'qlo', 'QL11p004981' => 'qlo', 'RcHm_v2.0_Chr1g0318301' => 'rch', 'RcHm_v2.0_Chr4g0418501' => 'rch', 'RcHm_v2.0_Chr4g0439971' => 'rch', 'RcHm_v2.0_Chr5g0008541' => 'rch', 'RcHm_v2.0_Chr5g0014101' => 'rch', 'RcHm_v2.0_Chr5g0014131' => 'rch', 'RcHm_v2.0_Chr5g0033621' => 'rch', 'RcHm_v2.0_Chr6g0272041' => 'rch', 'RcHm_v2.0_Chr6g0278831' => 'rch', 'Rhsim02G0130400' => 'rsi', 'Rhsim02G0171100' => 'rsi', 'Rhsim05G0053000' => 'rsi', 'Rhsim05G0053100' => 'rsi', 'Rhsim06G0096500' => 'rsi', 'Rhsim06G0096600' => 'rsi', 'Rhsim06G0199100' => 'rsi', 'Rhsim12G0062300' => 'rsi', 'Rhsim12G0062800' => 'rsi', 'Sabra02G0118600' => 'sbr', 'Sabra04G0027300' => 'sbr', 'Sabra04G0119500' => 'sbr', 'Sabra08G0112500' => 'sbr', 'Sabra11G0036800' => 'sbr', 'Sabra11G0103800' => 'sbr', 'Sabra13G0096300' => 'sbr', 'Sabra16G0262300' => 'sbr', 'Sabra18G0091700' => 'sbr', 'Sabra19G0095400' => 'sbr', 'SalBow6G3080' => 'sbo', 'SalBow7G1157' => 'sbo', 'SalBow7G2123' => 'sbo', 'SalBow7G2285' => 'sbo', 'SalBow7G3537' => 'sbo', 'SalBow8G2947' => 'sbo', 'SalBow8G4463' => 'sbo', 'SalBow8G5466' => 'sbo', 'Sc01g0001750' => 'sci', 'Sc02g0006640' => 'sci', 'Sc02g0006670' => 'sci', 'Sc04g0008220' => 'sci', 'Sc05g0006190' => 'sci', 'Sc08g0002760' => 'sci', 'Sc17g0006170' => 'sci', 'Sc22g0002050' => 'sci', 'Sc23g0001190' => 'sci', 'Sc24g0000980' => 'sci', 'Sed0006245' => 'sed', 'Sed0007543' => 'sed', 'Sed0009411' => 'sed', 'Sed0010765' => 'sed', 'Sed0012944' => 'sed', 'Sed0014682' => 'sed', 'Sed0016174' => 'sed', 'Sed0016796' => 'sed', 'Sed0020317' => 'sed', 'Sed0021467' => 'sed', 'SEGI_01316' => 'sgi', 'SEGI_03374' => 'sgi', 'SEGI_16265' => 'sgi', 'SEGI_18569' => 'sgi', 'SEGI_20351' => 'sgi', 'SEGI_26395' => 'sgi', 'SEGI_29469' => 'sgi', 'SEGI_34771' => 'sgi', 'SEGI_36769' => 'sgi', 'SEGI_37139' => 'sgi', 'SGA_v2.0_scaffold100G29687' => 'sas', 'SGA_v2.0_scaffold118G32472' => 'sas', 'SGA_v2.0_scaffold14G07051' => 'sas', 'SGA_v2.0_scaffold183G39845' => 'sas', 'SGA_v2.0_scaffold1G00174' => 'sas', 'SGA_v2.0_scaffold22G09714' => 'sas', 'SGA_v2.0_scaffold333G48992' => 'sas', 'SGA_v2.0_scaffold46G17491' => 'sas', 'SGA_v2.0_scaffold49G18294' => 'sas', 'SGA_v2.0_scaffold63G21658' => 'sas', 'SHI01741' => 'shi', 'SHI05771' => 'shi', 'SHI18077' => 'shi', 'SHI20525' => 'shi', 'SHI20527' => 'shi', 'SHI20528' => 'shi', 'SMO172G0185' => 'smo', 'SMO198G0020' => 'smo', 'SMO351G0006' => 'smo', 'SMO356G0118' => 'smo', 'SMO358G0296' => 'smo', 'SMO367G0079' => 'smo', 'SMO367G1277' => 'smo', 'Solyc01g014220.3' => 'sly', 'Solyc01g111770.2' => 'sly', 'Solyc02g078180.3' => 'sly', 'Solyc03g006430.3' => 'sly', 'Solyc03g006456.1' => 'sly', 'Solyc03g079860.2' => 'sly', 'Solyc04g079770.3' => 'sly', 'Solyc05g007430.4' => 'sly', 'Solyc07g063150.3' => 'sly', 'Solyc08g016620.3' => 'sly', 'Solyc09g057590.3' => 'sly', 'Solyc09g057600.1' => 'sly', 'Solyc10g009050.3' => 'sly', 'Solyc11g017420.2' => 'sly', 'Sopen01g053810' => 'spe', 'Sopen02g023040' => 'spe', 'Sopen03g002440' => 'spe', 'Sopen04g033350' => 'spe', 'Sopen05g003310' => 'spe', 'Sopen07g004050' => 'spe', 'Sopen07g031340' => 'spe', 'Sopen08g006990' => 'spe', 'Sopen10g004830' => 'spe', 'Sopen11g009370' => 'spe', 'Sp1g24450' => 'spa', 'Sp1g29670' => 'spa', 'Sp1g39600' => 'spa', 'Sp2g11080' => 'spa', 'Sp2g13970' => 'spa', 'Sp4g16130' => 'spa', 'Sp6g13080' => 'spa', 'Sp7g37270' => 'spa', 'TAR371G0065' => 'tar', 'TAR376G0340' => 'tar', 'TAR376G0435' => 'tar', 'TAR381G0002' => 'tar', 'TAR381G1236' => 'tar', 'TAR624G0055' => 'tar', 'TAR624G0324' => 'tar', 'TAR624G0696' => 'tar', 'TAR624G0906' => 'tar', 'TAR625G0107' => 'tar', 'TAR626G0015' => 'tar', 'TAR626G1356' => 'tar', 'TAR627G0888' => 'tar', 'TAR628G0399' => 'tar', 'TAR628G1327' => 'tar', 'TAR629G2831' => 'tar', 'TAR629G2874' => 'tar', 'TAR633G1432' => 'tar', 'TAR633G2771' => 'tar', 'THA.LOC104803394' => 'tha', 'THA.LOC104805153' => 'tha', 'THA.LOC104806784' => 'tha', 'THA.LOC104810473' => 'tha', 'THA.LOC104813100' => 'tha', 'THA.LOC104814215' => 'tha', 'THA.LOC104815554' => 'tha', 'THA.LOC104820544' => 'tha', 'THA.LOC104824754' => 'tha', 'THA.LOC104827717' => 'tha', 'Thecc.02G031400' => 'tca', 'Thecc.02G055900' => 'tca', 'Thecc.02G350800' => 'tca', 'Thecc.06G150900' => 'tca', 'Thecc.06G186600' => 'tca', 'Thecc.07G089600' => 'tca', 'Thecc.08G020400' => 'tca', 'Thecc.08G182100' => 'tca', 'Thhalv10000873m.g' => 'esa', 'Thhalv10004185m.g' => 'esa', 'Thhalv10006981m.g' => 'esa', 'Thhalv10007204m.g' => 'esa', 'Thhalv10011374m.g' => 'esa', 'Thhalv10013482m.g' => 'esa', 'Thhalv10017801m.g' => 'esa', 'Thhalv10024983m.g' => 'esa', 'TPR.G12072' => 'tpr', 'TPR.G15769' => 'tpr', 'TPR.G16504' => 'tpr', 'TPR.G16506' => 'tpr', 'TPR.G24345' => 'tpr', 'TPR.G26666' => 'tpr', 'TPR.G27320' => 'tpr', 'TPR.G31819' => 'tpr', 'TPR.G38879' => 'tpr', 'TPR.G39015' => 'tpr', 'TPR.G8819' => 'tpr', 'TWI09G0924' => 'twi', 'TWI12G0811' => 'twi', 'TWI12G1294' => 'twi', 'TWI31G0150' => 'twi', 'TWI36G1262' => 'twi', 'TWI38G1287' => 'twi', 'TWI38G1633' => 'twi', 'TWI38G1982' => 'twi', 'TWI39G0116' => 'twi', 'TWI60G1011' => 'twi', 'TWI63G0171' => 'twi', 'TWI73G0839' => 'twi', 'TWI79G1511' => 'twi', 'unitig_0.g915' => 'ugi', 'unitig_0.g916' => 'ugi', 'unitig_21.g20219' => 'ugi', 'unitig_21.g20416' => 'ugi', 'unitig_578.g16132' => 'ugi', 'unitig_578.g16718' => 'ugi', 'unitig_62.g23481' => 'ugi', 'unitig_744.g24535' => 'ugi', 'unitig_749.g13525' => 'ugi', 'vmacro01248' => 'vma', 'vmacro02290' => 'vma', 'vmacro10946' => 'vma', 'vmacro11865' => 'vma', 'vmacro12493' => 'vma', 'vmacro17322' => 'vma', 'vmacro21599' => 'vma', 'vmacro23041' => 'vma', 'VMungo0251G0004' => 'vmu', 'VMungo0251G2639' => 'vmu', 'VMungo0251G2967' => 'vmu', 'VMungo0540G0864' => 'vmu', 'VMungo0540G1569' => 'vmu', 'VMungo0647G0317' => 'vmu', 'VMungo0720G1373' => 'vmu', 'VMungo0720G1508' => 'vmu', 'VMungo1080G0485' => 'vmu', 'VMungo1215G3177' => 'vmu', 'Zm00001eb112600' => 'zma', 'Zm00001eb120220' => 'zma', 'Zm00001eb153240' => 'zma', 'Zm00001eb168880' => 'zma', 'Zm00001eb213920' => 'zma', 'Zm00001eb228280' => 'zma', 'Zm00001eb254580' => 'zma', 'Zm00001eb272180' => 'zma', 'Zm00001eb293190' => 'zma', 'Zm00001eb322930' => 'zma', 'Zm00001eb353360' => 'zma', 'Zm00001eb353390' => 'zma', 'Zm00001eb353430' => 'zma', 'Zm00001eb353440' => 'zma', 'Zm00001eb353780' => 'zma' ) $gf_id = 'HOM05D000499' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000499' ) $data_identifier = 'HOM05D000499' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 29, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 12, 'amhyb' => (int) 8, 'aly' => (int) 12, 'aox' => (int) 9, 'arhy' => (int) 26, 'ath' => (int) 8, 'atr' => (int) 7, 'acertr' => (int) 10, 'cqu' => (int) 15, 'bca' => (int) 29, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 11, 'cansat' => (int) 8, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 9, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 8, 'cpa' => (int) 10, 'csa' => (int) 7, 'camsi' => (int) 20, 'dca' => (int) 8, 'din' => (int) 12, 'dzi' => (int) 14, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 6, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 38, 'gra' => (int) 16, 'vvi' => (int) 8, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 5, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 11, 'lja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 11, 'mpo' => (int) 3, 'mbi' => (int) 14, 'mdo' => (int) 14, 'mtr' => (int) 8, 'cme' => (int) 9, 'egut' => (int) 9, 'ama' => (int) 11, 'nta' => (int) 17, 'nnu' => (int) 11, 'oeu' => (int) 18, 'osa' => (int) 8, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 6, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 9, 'rsi' => (int) 9, 'sbr' => (int) 10, 'sbo' => (int) 8, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 10, 'sas' => (int) 10, 'shi' => (int) 6, 'smo' => (int) 7, 'sly' => (int) 14, 'spe' => (int) 10, 'spa' => (int) 8, 'tar' => (int) 19, 'tha' => (int) 10, 'tca' => (int) 8, 'esa' => (int) 8, 'tpr' => (int) 11, 'twi' => (int) 13, 'ugi' => (int) 9, 'vma' => (int) 8, 'vmu' => (int) 10, 'zma' => (int) 15 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb353780' $species_info = array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ) $local_species = 'eca' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000499', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1066', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p29780' => 'bna', 'A02p33180' => 'bna', 'A03p16470' => 'bna', 'A03p66010' => 'bna', 'A04p25970' => 'bna', 'A06p01270' => 'bna', 'A06p46080' => 'bna', 'A07p11400' => 'bna', 'A08p01840' => 'bna', 'A08p08230' => 'bna', 'A08p25740' => 'bna', 'A09p32070' => 'bna', 'A09p37830' => 'bna', 'A09p42840' => 'bna', 'A09p42850' => 'bna', 'Aa31LG10G2060' => 'aar', 'Aa31LG2G7410' => 'aar', 'Aa31LG6G10200' => 'aar', 'Aa31LG6G16680' => 'aar', 'Aa31LG6G8470' => 'aar', 'Aa31LG9G12730' => 'aar', 'Aa31LG9G13680' => 'aar', 'Aa31LG9G14920' => 'aar', 'Aa31LG9G6650' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4977' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5467' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3254' => 'aag', 'Actinidia02578' => 'ach', 'Actinidia07693' => 'ach', 'Actinidia08413' => 'ach', 'Actinidia08414' => 'ach', 'Actinidia15289' => 'ach', 'Actinidia19871' => 'ach', 'Actinidia21475' => 'ach', 'Actinidia22576' => 'ach', 'Actinidia28327' => 'ach', 'Actinidia32491' => 'ach', 'Actinidia39463' => 'ach', 'Actinidia39571' => 'ach', 'Ah.01g013750' => 'amhyb', 'Ah.01g023210' => 'amhyb', 'Ah.04g164850' => 'amhyb', 'Ah.05g178060' => 'amhyb', 'Ah.07g204270' => 'amhyb', 'Ah.07g208480' => 'amhyb', 'Ah.09g237410' => 'amhyb', 'Ah.14g089460' => 'amhyb', 'AL1G41790' => 'aly', 'AL1G49050' => 'aly', 'AL1G53810' => 'aly', 'AL1G61400' => 'aly', 'AL4G18580' => 'aly', 'AL5G12510' => 'aly', 'AL5G12540' => 'aly', 'AL6G43230' => 'aly', 'AL7G10370' => 'aly', 'AL7G19250' => 'aly', 'AL8G12240' => 'aly', 'AL8G18540' => 'aly', 'Aqoxy1G02409' => 'aox', 'Aqoxy2G03993' => 'aox', 'Aqoxy3G03357' => 'aox', 'Aqoxy4G00785' => 'aox', 'Aqoxy5G02598' => 'aox', 'Aqoxy6G00132' => 'aox', 'Aqoxy7G01776' => 'aox', 'Aqoxy7G02316' => 'aox', 'Aqoxy7G03973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.12AFKW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B8730' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27IQR1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3F75VG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3RE0GA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41TCQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.527VTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FIR39' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5W8UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DA38EV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ63HS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H1I32C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HC27T5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4M8AP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7N3CZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9UVDZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LS1NQA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT1D4B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SKC4TM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCFV76' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF9Q1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQWD9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1ZM88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WE07RT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YCK7VH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJE6Q6' => 'arhy', 'AT1G28240' => 'ath', 'AT1G34550' => 'ath', 'AT1G53040' => 'ath', 'AT2G02910' => 'ath', 'AT4G09630' => 'ath', 'AT4G38500' => 'ath', 'AT5G42660' => 'ath', 'AT5G46220' => 'ath', 'ATR0152G026' => 'atr', 'ATR0564G343' => 'atr', 'ATR0706G151' => 'atr', 'ATR0733G207' => 'atr', 'ATR0751G234' => 'atr', 'ATR0807G048' => 'atr', 'ATR1091G084' => 'atr', 'Atru.chr10.1229' => 'acertr', 'Atru.chr10.1230' => 'acertr', 'Atru.chr10.1874' => 'acertr', 'Atru.chr11.1808' => 'acertr', 'Atru.chr13.1795' => 'acertr', 'Atru.chr13.570' => 'acertr', 'Atru.chr2.2608' => 'acertr', 'Atru.chr2.2609' => 'acertr', 'Atru.chr5.3428' => 'acertr', 'Atru.chr8.1171' => 'acertr', 'AUR62004651' => 'cqu', 'AUR62008675' => 'cqu', 'AUR62010014' => 'cqu', 'AUR62013004' => 'cqu', 'AUR62014825' => 'cqu', 'AUR62015015' => 'cqu', 'AUR62015151' => 'cqu', 'AUR62017020' => 'cqu', 'AUR62019422' => 'cqu', 'AUR62023570' => 'cqu', 'AUR62025571' => 'cqu', 'AUR62029098' => 'cqu', 'AUR62033863' => 'cqu', 'AUR62034296' => 'cqu', 'AUR62040075' => 'cqu', 'BcaB02g07334' => 'bca', 'BcaB02g10575' => 'bca', 'BcaB03g12119' => 'bca', 'BcaB03g12120' => 'bca', 'BcaB03g13945' => 'bca', 'BcaB04g17123' => 'bca', 'BcaB04g17867' => 'bca', 'BcaB04g19839' => 'bca', 'BcaB07g30317' => 'bca', 'BcaB07g32432' => 'bca', 'BcaB07g33362' => 'bca', 'BcaB08g36611' => 'bca', 'BcaC01g00028' => 'bca', 'BcaC01g01356' => 'bca', 'BcaC01g02034' => 'bca', 'BcaC01g06051' => 'bca', 'BcaC03g16839' => 'bca', 'BcaC03g17176' => 'bca', 'BcaC05g26829' => 'bca', 'BcaC06g31490' => 'bca', 'BcaC06g35344' => 'bca', 'BcaC06g36570' => 'bca', 'BcaC07g37537' => 'bca', 'BcaC08g43491' => 'bca', 'BcaC08g43773' => 'bca', 'BcaNung00234' => 'bca', 'BcaNung01982' => 'bca', 'BcaNung03707' => 'bca', 'BcaNung06454' => 'bca', 'BolC2t10762H' => 'bol', 'BolC2t11191H' => 'bol', 'BolC3t14322H' => 'bol', 'BolC3t19747H' => 'bol', 'BolC3t21425H' => 'bol', 'BolC4t27800H' => 'bol', 'BolC5t31423H' => 'bol', 'BolC6t35951H' => 'bol', 'BolC6t36282H' => 'bol', 'BolC7t40678H' => 'bol', 'BolC7t40679H' => 'bol', 'BolC7t42222H' => 'bol', 'BolC7t43492H' => 'bol', 'BolC7t46785H' => 'bol', 'BolC8t47853H' => 'bol', 'BolC9t56805H' => 'bol', 'BraA02t08000Z' => 'bra', 'BraA02t08341Z' => 'bra', 'BraA03t10936Z' => 'bra', 'BraA03t15657Z' => 'bra', 'BraA04t18100Z' => 'bra', 'BraA05t20523Z' => 'bra', 'BraA06t23353Z' => 'bra', 'BraA06t27473Z' => 'bra', 'BraA06t27769Z' => 'bra', 'BraA07t28928Z' => 'bra', 'BraA08t32236Z' => 'bra', 'BraA08t32841Z' => 'bra', 'BraA08t34524Z' => 'bra', 'BraA09t38742Z' => 'bra', 'BraA09t39295Z' => 'bra', 'C02p47180' => 'bna', 'C02p50990' => 'bna', 'C03p19360' => 'bna', 'C03p74950' => 'bna', 'C03p91000' => 'bna', 'C04p63260' => 'bna', 'C05p27050' => 'bna', 'C06p08750' => 'bna', 'C06p11490' => 'bna', 'C07p02820' => 'bna', 'C07p17180' => 'bna', 'C07p29440' => 'bna', 'C07p63730' => 'bna', 'C09p39260' => 'bna', 'CAN.G1164.34' => 'can', 'CAN.G1164.39' => 'can', 'CAN.G1530.3' => 'can', 'CAN.G162.61' => 'can', 'CAN.G176.6' => 'can', 'CAN.G289.49' => 'can', 'CAN.G370.21' => 'can', 'CAN.G370.22' => 'can', 'CAN.G371.117' => 'can', 'CAN.G58.37' => 'can', 'CAN.G588.98' => 'can', 'CANSAT21G2266' => 'cansat', 'CANSAT25G2799' => 'cansat', 'CANSAT35G0862' => 'cansat', 'CANSAT35G1704' => 'cansat', 'CANSAT35G1760' => 'cansat', 'CANSAT56G3971' => 'cansat', 'CANSAT56G4116' => 'cansat', 'CANSAT80G1259' => 'cansat', 'CARHR027730' => 'chi', 'CARHR033880' => 'chi', 'CARHR043270' => 'chi', 'CARHR145330' => 'chi', 'CARHR145340' => 'chi', 'CARHR175570' => 'chi', 'CARHR181570' => 'chi', 'CARHR258470' => 'chi', 'CARHR260490' => 'chi', 'CARHR294220' => 'chi', 'Carub.0001s2668' => 'cru', 'Carub.0001s3257' => 'cru', 'Carub.0001s4220' => 'cru', 'Carub.0005s0179' => 'cru', 'Carub.0006s2807' => 'cru', 'Carub.0007s0039' => 'cru', 'Carub.0008s0169' => 'cru', 'Carub.0008s0636' => 'cru', 'Ca_00338_v3' => 'car', 'Ca_00542_v3' => 'car', 'Ca_01844_v3' => 'car', 'Ca_10611_v3' => 'car', 'Ca_13326_v3' => 'car', 'Ca_17944_v3' => 'car', 'Ca_18546_v3' => 'car', 'Ca_24219_v3' => 'car', 'Ca_29972_v3' => 'car', 'CBR_g3681' => 'cbr', 'CBR_g40021' => 'cbr', 'Cc01_g08140' => 'ccan', 'Cc02_g13410' => 'ccan', 'Cc02_g37480' => 'ccan', 'Cc05_g12030' => 'ccan', 'Cc09_g03370' => 'ccan', 'Cc09_g10300' => 'ccan', 'Cc10_g03530' => 'ccan', 'Cc10_g11380' => 'ccan', 'CDE01G0176' => 'cde', 'CDE02G0675' => 'cde', 'CDE02G0942' => 'cde', 'CDE02G1153' => 'cde', 'CDE02G4177' => 'cde', 'CDE04G2117' => 'cde', 'CDE04G2736' => 'cde', 'CDE08G1161' => 'cde', 'CDE09G1238' => 'cde', 'Cfa000467' => 'cfa', 'Cfa000947' => 'cfa', 'Cfa004969' => 'cfa', 'Cfa005284' => 'cfa', 'Cfa008993' => 'cfa', 'Cfa018187' => 'cfa', 'Cfa018454' => 'cfa', 'Cfa020585' => 'cfa', 'Ciclev10000424m.g' => 'ccl', 'Ciclev10003605m.g' => 'ccl', 'Ciclev10007828m.g' => 'ccl', 'Ciclev10014620m.g' => 'ccl', 'Ciclev10015169m.g' => 'ccl', 'Ciclev10018291m.g' => 'ccl', 'Ciclev10028256m.g' => 'ccl', 'Ciclev10033822m.g' => 'ccl', 'CiPaw.05G060300' => 'cil', 'CiPaw.05G085000' => 'cil', 'CiPaw.06G083700' => 'cil', 'CiPaw.06G120300' => 'cil', 'CiPaw.09G060500' => 'cil', 'CiPaw.09G123800' => 'cil', 'CiPaw.11G169700' => 'cil', 'CiPaw.12G118300' => 'cil', 'CiPaw.15G071000' => 'cil', 'CiPaw.15G081900' => 'cil', 'ClCG01G024610' => 'cla', 'ClCG03G006070' => 'cla', 'ClCG05G019250' => 'cla', 'ClCG09G009500' => 'cla', 'ClCG11G008200' => 'cla', 'ClCG11G018080' => 'cla', 'COL.COLO4_17373' => 'col', 'COL.COLO4_22994' => 'col', 'COL.COLO4_26389' => 'col', 'COL.COLO4_27170' => 'col', 'COL.COLO4_31074' => 'col', 'COL.COLO4_31465' => 'col', 'COL.COLO4_36438' => 'col', 'COL.COLO4_36439' => 'col', 'Cpa.g.c38781' => 'cpa', 'Cpa.g.sc128.12' => 'cpa', 'Cpa.g.sc166.7' => 'cpa', 'Cpa.g.sc166.8' => 'cpa', 'Cpa.g.sc20.111' => 'cpa', 'Cpa.g.sc27.31' => 'cpa', 'Cpa.g.sc64.36' => 'cpa', 'Cpa.g.sc64.37' => 'cpa', 'Cpa.g.sc66.49' => 'cpa', 'Cpa.g.sc80.64' => 'cpa', 'CsaV3_1G012320' => 'csa', 'CsaV3_2G008480' => 'csa', 'CsaV3_2G033450' => 'csa', 'CsaV3_3G044830' => 'csa', 'CsaV3_4G033710' => 'csa', 'CsaV3_6G051730' => 'csa', 'CsaV3_7G025350' => 'csa', 'CSS0001067' => 'camsi', 'CSS0005996' => 'camsi', 'CSS0006590' => 'camsi', 'CSS0009673' => 'camsi', 'CSS0010201' => 'camsi', 'CSS0010549' => 'camsi', 'CSS0011364' => 'camsi', 'CSS0014473' => 'camsi', 'CSS0014961' => 'camsi', 'CSS0020191' => 'camsi', 'CSS0021165' => 'camsi', 'CSS0022306' => 'camsi', 'CSS0030591' => 'camsi', 'CSS0030696' => 'camsi', 'CSS0032653' => 'camsi', 'CSS0037487' => 'camsi', 'CSS0041102' => 'camsi', 'CSS0041261' => 'camsi', 'CSS0046246' => 'camsi', 'CSS0049256' => 'camsi', 'DCAR_004075' => 'dca', 'DCAR_011538' => 'dca', 'DCAR_019553' => 'dca', 'DCAR_020952' => 'dca', 'DCAR_021739' => 'dca', 'DCAR_027407' => 'dca', 'DCAR_027913' => 'dca', 'DCAR_028066' => 'dca', 'Dinv05899' => 'din', 'Dinv07563' => 'din', 'Dinv08010' => 'din', 'Dinv14125' => 'din', 'Dinv20172' => 'din', 'Dinv30743' => 'din', 'Dinv31229' => 'din', 'Dinv34162' => 'din', 'Dinv36028' => 'din', 'Dinv39368' => 'din', 'Dinv40565' => 'din', 'Dinv41706' => 'din', 'Duzib052G0089' => 'dzi', 'Duzib116G0641' => 'dzi', 'Duzib132G0069' => 'dzi', 'Duzib132G1219' => 'dzi', 'Duzib147G0278' => 'dzi', 'Duzib160G0480' => 'dzi', 'Duzib170G0661' => 'dzi', 'Duzib177G0591' => 'dzi', 'Duzib187G1353' => 'dzi', 'Duzib192G0858' => 'dzi', 'Duzib192G0883' => 'dzi', 'Duzib213G0506' => 'dzi', 'Duzib235G0289' => 'dzi', 'Duzib251G0422' => 'dzi', 'ECA232G3898' => 'eca', 'ECA233G5950' => 'eca', 'ECA234G1699' => 'eca', 'ECA234G2421' => 'eca', 'ECA236G0426' => 'eca', 'ECA236G4331' => 'eca', 'ECA248G2573' => 'eca', 'EL10Ac1g00077' => 'bvu', 'EL10Ac1g01746' => 'bvu', 'EL10Ac2g03464' => 'bvu', 'EL10Ac4g08176' => 'bvu', 'EL10Ac7g17521' => 'bvu', 'EL10Ac8g20386' => 'bvu', 'EL10Ac9g21343' => 'bvu', 'EL10Ac9g22688' => 'bvu', 'Eucgr.B03434' => 'egr', 'Eucgr.D00618' => 'egr', 'Eucgr.E02395' => 'egr', 'Eucgr.F01129' => 'egr', 'Eucgr.F02622' => 'egr', 'Eucgr.F04207' => 'egr', 'FAN01G0570' => 'fan', 'FAN03G3351' => 'fan', 'FAN06G3702' => 'fan', 'FAN07G2149' => 'fan', 'FAN10G3758' => 'fan', 'FAN11G1170' => 'fan', 'FAN11G2050' => 'fan', 'FAN11G2724' => 'fan', 'FAN12G1700' => 'fan', 'FAN12G2028' => 'fan', 'FAN15G1160' => 'fan', 'FAN15G3063' => 'fan', 'FAN16G2540' => 'fan', 'FAN16G3077' => 'fan', 'FAN16G3624' => 'fan', 'FAN17G0221' => 'fan', 'FAN20G2492' => 'fan', 'FAN20G2905' => 'fan', 'FAN21G0548' => 'fan', 'FAN21G1300' => 'fan', 'FAN22G0077' => 'fan', 'FAN22G1315' => 'fan', 'FAN24G1280' => 'fan', 'FAN24G1445' => 'fan', 'FAN24G3527' => 'fan', 'FAN25G0464' => 'fan', 'FAN25G2885' => 'fan', 'FAN25G3270' => 'fan', 'FAN27G1101' => 'fan', 'FAN27G2846' => 'fan', 'FAN27G3524' => 'fan', 'FvH4_2g11770' => 'fve', 'FvH4_2g15630' => 'fve', 'FvH4_3g05570' => 'fve', 'FvH4_3g09110' => 'fve', 'FvH4_3g19940' => 'fve', 'FvH4_4g04821' => 'fve', 'FvH4_4g31480' => 'fve', 'FvH4_7g01740' => 'fve', 'Glyma.05G130400' => 'gma', 'Glyma.05G156400' => 'gma', 'Glyma.07G197000' => 'gma', 'Glyma.08G085151' => 'gma', 'Glyma.08G114500' => 'gma', 'Glyma.08G300400' => 'gma', 'Glyma.10G215800' => 'gma', 'Glyma.12G224400' => 'gma', 'Glyma.13G179300' => 'gma', 'Glyma.13G218151' => 'gma', 'Glyma.13G238800' => 'gma', 'Glyma.13G276900' => 'gma', 'Glyma.14G078200' => 'gma', 'Glyma.15G074500' => 'gma', 'Glyma.15G094100' => 'gma', 'Glyma.17G247200' => 'gma', 'Glyma.18G120100' => 'gma', 'Glyma.20G176000' => 'gma', 'Gohir.A01G063600' => 'ghi', 'Gohir.A01G170301' => 'ghi', 'Gohir.A02G060500' => 'ghi', 'Gohir.A05G133850' => 'ghi', 'Gohir.A05G161400' => 'ghi', 'Gohir.A06G012900' => 'ghi', 'Gohir.A06G035901' => 'ghi', 'Gohir.A06G127100' => 'ghi', 'Gohir.A06G210500' => 'ghi', 'Gohir.A08G008650' => 'ghi', 'Gohir.A09G072700' => 'ghi', 'Gohir.A09G088301' => 'ghi', 'Gohir.A10G040600' => 'ghi', 'Gohir.A12G036300' => 'ghi', 'Gohir.A12G143350' => 'ghi', 'Gohir.A12G165500' => 'ghi', 'Gohir.A13G145700' => 'ghi', 'Gohir.D01G050000' => 'ghi', 'Gohir.D01G051366' => 'ghi', 'Gohir.D01G161350' => 'ghi', 'Gohir.D02G065900' => 'ghi', 'Gohir.D05G164200' => 'ghi', 'Gohir.D05G355500' => 'ghi', 'Gohir.D06G010400' => 'ghi', 'Gohir.D06G111250' => 'ghi', 'Gohir.D06G132000' => 'ghi', 'Gohir.D06G210500' => 'ghi', 'Gohir.D07G165675' => 'ghi', 'Gohir.D08G062240' => 'ghi', 'Gohir.D08G086101' => 'ghi', 'Gohir.D08G138060' => 'ghi', 'Gohir.D09G072300' => 'ghi', 'Gohir.D10G041400' => 'ghi', 'Gohir.D11G191020' => 'ghi', 'Gohir.D11G212066' => 'ghi', 'Gohir.D12G036300' => 'ghi', 'Gohir.D12G168600' => 'ghi', 'Gohir.D13G150600' => 'ghi', 'Gorai.001G057300' => 'gra', 'Gorai.002G069900' => 'gra', 'Gorai.002G200000' => 'gra', 'Gorai.003G067600' => 'gra', 'Gorai.005G074800' => 'gra', 'Gorai.006G087300' => 'gra', 'Gorai.008G037500' => 'gra', 'Gorai.008G181400' => 'gra', 'Gorai.009G169400' => 'gra', 'Gorai.009G387900' => 'gra', 'Gorai.010G013300' => 'gra', 'Gorai.010G153800' => 'gra', 'Gorai.010G255800' => 'gra', 'Gorai.011G043700' => 'gra', 'Gorai.011G198900' => 'gra', 'Gorai.013G168400' => 'gra', 'GSVIVG01005212001' => 'vvi', 'GSVIVG01006163001' => 'vvi', 'GSVIVG01009625001' => 'vvi', 'GSVIVG01014338001' => 'vvi', 'GSVIVG01020005001' => 'vvi', 'GSVIVG01021450001' => 'vvi', 'GSVIVG01023975001' => 'vvi', 'GSVIVG01034490001' => 'vvi', 'HanXRQChr04g0112071' => 'han', 'HanXRQChr05g0131151' => 'han', 'HanXRQChr09g0262371' => 'han', 'HanXRQChr09g0268401' => 'han', 'HanXRQChr10g0279241' => 'han', 'HanXRQChr10g0297961' => 'han', 'HanXRQChr11g0326231' => 'han', 'HanXRQChr11g0328471' => 'han', 'HanXRQChr16g0507941' => 'han', 'HanXRQChr17g0560211' => 'han', 'Haze_02108' => 'cav', 'Haze_02428' => 'cav', 'Haze_05593' => 'cav', 'Haze_06448' => 'cav', 'Haze_09427' => 'cav', 'Haze_12022' => 'cav', 'Haze_17612' => 'cav', 'Haze_17928' => 'cav', 'Hma1.2p1_0032F.1_g019250' => 'hma', 'Hma1.2p1_0163F.1_g072690' => 'hma', 'Hma1.2p1_0265F.1_g106710' => 'hma', 'Hma1.2p1_0286F.1_g113970' => 'hma', 'Hma1.2p1_0363F.1_g136640' => 'hma', 'Hma1.2p1_0584F.1_g183470' => 'hma', 'Hma1.2p1_0885F.1_g232570' => 'hma', 'HPP92_006022' => 'vpl', 'HPP92_007320' => 'vpl', 'HPP92_011521' => 'vpl', 'HPP92_019387' => 'vpl', 'HPP92_024038' => 'vpl', 'Hund05891' => 'sun', 'Hund06450' => 'sun', 'Hund12053' => 'sun', 'Hund16800' => 'sun', 'Hund21222' => 'sun', 'Hund22896' => 'sun', 'Hund23746' => 'sun', 'Hund27083' => 'sun', 'Lalb_Chr02g0141831' => 'lal', 'Lalb_Chr02g0141841' => 'lal', 'Lalb_Chr05g0220411' => 'lal', 'Lalb_Chr06g0162081' => 'lal', 'Lalb_Chr09g0327651' => 'lal', 'Lalb_Chr13g0295051' => 'lal', 'Lalb_Chr15g0086801' => 'lal', 'Lalb_Chr16g0383781' => 'lal', 'Lalb_Chr16g0383791' => 'lal', 'Lalb_Chr18g0055441' => 'lal', 'Lalb_Chr18g0059611' => 'lal', 'Lalb_Chr20g0109661' => 'lal', 'Lalb_Chr20g0109831' => 'lal', 'Lalb_Chr20g0121871' => 'lal', 'Lalb_Chr22g0355361' => 'lal', 'Lalb_Chr25g0286371' => 'lal', 'Lj1A1187G43' => 'lonja', 'Lj1A1205T50' => 'lonja', 'Lj1A800G33' => 'lonja', 'Lj1C1187T7' => 'lonja', 'Lj1C843T11' => 'lonja', 'Lj1g0010940' => 'lja', 'Lj2A288T69' => 'lonja', 'Lj3g0024276' => 'lja', 'Lj4A47T76' => 'lonja', 'Lj4g0005805' => 'lja', 'Lj4g0006097' => 'lja', 'Lj4g0008528' => 'lja', 'Lj4g0024907' => 'lja', 'Lj5g0012472' => 'lja', 'Lj5g0018648' => 'lja', 'Lj6C789G1' => 'lonja', 'Lj6g0004000' => 'lja', 'Lj7A292G67' => 'lonja', 'Lj7A292T64' => 'lonja', 'Lj9A400T58' => 'lonja', 'Lsat_1_v5_gn_1_126181' => 'lsa', 'Lsat_1_v5_gn_4_123041' => 'lsa', 'Lsat_1_v5_gn_4_133620' => 'lsa', 'Lsat_1_v5_gn_4_53221' => 'lsa', 'Lsat_1_v5_gn_4_71961' => 'lsa', 'Lsat_1_v5_gn_7_105241' => 'lsa', 'Lsat_1_v5_gn_7_21361' => 'lsa', 'Lsat_1_v5_gn_7_28860' => 'lsa', 'Lsat_1_v5_gn_7_31260' => 'lsa', 'Lsat_1_v5_gn_8_52801' => 'lsa', 'Manes.02G191400' => 'mes', 'Manes.03G110100' => 'mes', 'Manes.04G071100' => 'mes', 'Manes.05G100500' => 'mes', 'Manes.05G164700' => 'mes', 'Manes.15G087000' => 'mes', 'Manes.15G121500' => 'mes', 'Manes.16G028300' => 'mes', 'Manes.17G046100' => 'mes', 'Manes.17G069800' => 'mes', 'Manes.18G100500' => 'mes', 'Mapoly0002s0109' => 'mpo', 'Mapoly0024s0007' => 'mpo', 'Mapoly0089s0032' => 'mpo', 'MBI04_g42241_MAGBIO' => 'mbi', 'MBI05_g11988_MAGBIO' => 'mbi', 'MBI05_g35452_MAGBIO' => 'mbi', 'MBI07_g30179_MAGBIO' => 'mbi', 'MBI07_g35859_MAGBIO' => 'mbi', 'MBI07_g35860_MAGBIO' => 'mbi', 'MBI07_g37166_MAGBIO' => 'mbi', 'MBI08_g18172_MAGBIO' => 'mbi', 'MBI09_g08441_MAGBIO' => 'mbi', 'MBI13_g01676_MAGBIO' => 'mbi', 'MBI14_g42955_MAGBIO' => 'mbi', 'MBI16_g13161_MAGBIO' => 'mbi', 'MBI17_g27204_MAGBIO' => 'mbi', 'MBI19_g21595_MAGBIO' => 'mbi', 'MD00G1148400' => 'mdo', 'MD02G1301200' => 'mdo', 'MD03G1227800' => 'mdo', 'MD05G1041100' => 'mdo', 'MD05G1124800' => 'mdo', 'MD05G1284000' => 'mdo', 'MD05G1338800' => 'mdo', 'MD05G1338900' => 'mdo', 'MD07G1022800' => 'mdo', 'MD10G1047500' => 'mdo', 'MD10G1127500' => 'mdo', 'MD10G1262300' => 'mdo', 'MD10G1293800' => 'mdo', 'MD16G1074300' => 'mdo', 'Medtr1g021670' => 'mtr', 'Medtr1g096320' => 'mtr', 'Medtr2g013690' => 'mtr', 'Medtr2g019450' => 'mtr', 'Medtr2g085170' => 'mtr', 'Medtr4g088785' => 'mtr', 'Medtr8g055930' => 'mtr', 'Medtr8g085850' => 'mtr', 'MELO3C002605.2' => 'cme', 'MELO3C003891.2' => 'cme', 'MELO3C004012.2' => 'cme', 'MELO3C007134.2' => 'cme', 'MELO3C008118.2' => 'cme', 'MELO3C016700.2' => 'cme', 'MELO3C024127.2' => 'cme', 'MELO3C033361.2' => 'cme', 'MELO3C033362.2' => 'cme', 'Migut.C00430' => 'egut', 'Migut.C01246' => 'egut', 'Migut.E00101' => 'egut', 'Migut.H01486' => 'egut', 'Migut.H01939' => 'egut', 'Migut.K00360' => 'egut', 'Migut.M00910' => 'egut', 'Migut.M01139' => 'egut', 'Migut.N02677' => 'egut', 'MSTRG.13252' => 'ama', 'MSTRG.14701' => 'ama', 'MSTRG.1521' => 'ama', 'MSTRG.15884' => 'ama', 'MSTRG.16242' => 'ama', 'MSTRG.22285' => 'ama', 'MSTRG.22444' => 'ama', 'MSTRG.2349' => 'ama', 'MSTRG.26308' => 'ama', 'MSTRG.28296' => 'ama', 'MSTRG.9895' => 'ama', 'Nitab4.5_0000110g0060' => 'nta', 'Nitab4.5_0000420g0130' => 'nta', 'Nitab4.5_0000422g0030' => 'nta', 'Nitab4.5_0000560g0180' => 'nta', 'Nitab4.5_0000703g0100' => 'nta', 'Nitab4.5_0000786g0200' => 'nta', 'Nitab4.5_0001336g0020' => 'nta', 'Nitab4.5_0001796g0030' => 'nta', 'Nitab4.5_0003348g0060' => 'nta', 'Nitab4.5_0003698g0040' => 'nta', 'Nitab4.5_0003942g0090' => 'nta', 'Nitab4.5_0004775g0070' => 'nta', 'Nitab4.5_0004864g0030' => 'nta', 'Nitab4.5_0005615g0020' => 'nta', 'Nitab4.5_0009288g0030' => 'nta', 'Nitab4.5_0009341g0010' => 'nta', 'Nitab4.5_0009535g0010' => 'nta', 'Nn1g03995' => 'nnu', 'Nn1g04100' => 'nnu', 'Nn1g06530' => 'nnu', 'Nn3g16404' => 'nnu', 'Nn3g17212' => 'nnu', 'Nn3g20776' => 'nnu', 'Nn3g21923' => 'nnu', 'Nn5g27737' => 'nnu', 'Nn5g29461' => 'nnu', 'Nn7g38355' => 'nnu', 'Nn8g39873' => 'nnu', 'Oeu000548.2' => 'oeu', 'Oeu004672.1' => 'oeu', 'Oeu015605.2' => 'oeu', 'Oeu016092.1' => 'oeu', 'Oeu017879.3' => 'oeu', 'Oeu024910.1' => 'oeu', 'Oeu028965.1' => 'oeu', 'Oeu031269.1' => 'oeu', 'Oeu031270.1' => 'oeu', 'Oeu032535.1' => 'oeu', 'Oeu034151.1' => 'oeu', 'Oeu034152.1' => 'oeu', 'Oeu034588.2' => 'oeu', 'Oeu050846.1' => 'oeu', 'Oeu050849.2' => 'oeu', 'Oeu051063.2' => 'oeu', 'Oeu052368.1' => 'oeu', 'Oeu052370.1' => 'oeu', 'Os01g0210400' => 'osa', 'Os01g0304300' => 'osa', 'Os01g0749100' => 'osa', 'Os02g0745800' => 'osa', 'Os03g0769050' => 'osa', 'Os05g0531500' => 'osa', 'Os06g0724300' => 'osa', 'Os11g0198100' => 'osa', 'Peaxi162Scf00069g01425' => 'pax', 'Peaxi162Scf00280g00811' => 'pax', 'Peaxi162Scf00310g00615' => 'pax', 'Peaxi162Scf00362g00542' => 'pax', 'Peaxi162Scf00461g00310' => 'pax', 'Peaxi162Scf00530g00118' => 'pax', 'Peaxi162Scf00541g00057' => 'pax', 'Peaxi162Scf00661g00017' => 'pax', 'Peaxi162Scf00926g00027' => 'pax', 'Peaxi162Scf01064g00263' => 'pax', 'Peaxi162Scf01211g00135' => 'pax', 'PGR004G2336' => 'pgr', 'PGR042G0327' => 'pgr', 'PGR042G1957' => 'pgr', 'PGR042G2003' => 'pgr', 'PGR042G3929' => 'pgr', 'PGR083G1137' => 'pgr', 'PGR083G1364' => 'pgr', 'PGSC0003DMG400003381' => 'stu', 'PGSC0003DMG400003417' => 'stu', 'PGSC0003DMG400008981' => 'stu', 'PGSC0003DMG400012417' => 'stu', 'PGSC0003DMG400012823' => 'stu', 'PGSC0003DMG400016885' => 'stu', 'PGSC0003DMG400022812' => 'stu', 'PGSC0003DMG400029726' => 'stu', 'PGSC0003DMG401009243' => 'stu', 'PGSC0003DMG401031505' => 'stu', 'PGSC0003DMG402031505' => 'stu', 'Phvul.001G017600' => 'pvu', 'Phvul.002G193500' => 'pvu', 'Phvul.002G228900' => 'pvu', 'Phvul.002G236800' => 'pvu', 'Phvul.003G049500' => 'pvu', 'Phvul.005G072000' => 'pvu', 'Phvul.006G164800' => 'pvu', 'Phvul.006G185100' => 'pvu', 'Phvul.007G090000' => 'pvu', 'Potri.001G399800' => 'ptr', 'Potri.002G149900' => 'ptr', 'Potri.004G044100' => 'ptr', 'Potri.004G177600' => 'ptr', 'Potri.009G138000' => 'ptr', 'Potri.010G094000' => 'ptr', 'Potri.011G053000' => 'ptr', 'Potri.011G119300' => 'ptr', 'Potri.013G113700' => 'ptr', 'Potri.018G107800' => 'ptr', 'Potri.019G084100' => 'ptr', 'Pp3c14_23720' => 'ppa', 'Pp3c16_6340' => 'ppa', 'Pp3c23_13420' => 'ppa', 'Pp3c24_2740' => 'ppa', 'Pp3c25_860' => 'ppa', 'Pp3c8_21750' => 'ppa', 'Prupe.1G273000' => 'ppe', 'Prupe.1G273700' => 'ppe', 'Prupe.1G274100' => 'ppe', 'Prupe.2G023300' => 'ppe', 'Prupe.4G048000' => 'ppe', 'Prupe.4G080400' => 'ppe', 'Prupe.4G181200' => 'ppe', 'Prupe.8G056900' => 'ppe', 'Prupe.8G168700' => 'ppe', 'Psat1g189080' => 'psa', 'Psat1g204760' => 'psa', 'Psat4g175560' => 'psa', 'Psat4g177720' => 'psa', 'Psat5g244240' => 'psa', 'Psat6g010720' => 'psa', 'Psat6g187200' => 'psa', 'Psat7g072040' => 'psa', 'PSO017G3501' => 'pso', 'PSO063G2148' => 'pso', 'PSO063G5608' => 'pso', 'PSO210G6392' => 'pso', 'PSO541G2319' => 'pso', 'PSO541G2836' => 'pso', 'PSO541G4012' => 'pso', 'PSO541G6253' => 'pso', 'PSO675G0580' => 'pso', 'PSO675G0856' => 'pso', 'PSO675G5635' => 'pso', 'PSO675G9157' => 'pso', 'PSO832G1660' => 'pso', 'PSO832G1969' => 'pso', 'QL02p007186' => 'qlo', 'QL02p033904' => 'qlo', 'QL03p064391' => 'qlo', 'QL05p040593' => 'qlo', 'QL05p058242' => 'qlo', 'QL08p021825' => 'qlo', 'QL11p004981' => 'qlo', 'RcHm_v2.0_Chr1g0318301' => 'rch', 'RcHm_v2.0_Chr4g0418501' => 'rch', 'RcHm_v2.0_Chr4g0439971' => 'rch', 'RcHm_v2.0_Chr5g0008541' => 'rch', 'RcHm_v2.0_Chr5g0014101' => 'rch', 'RcHm_v2.0_Chr5g0014131' => 'rch', 'RcHm_v2.0_Chr5g0033621' => 'rch', 'RcHm_v2.0_Chr6g0272041' => 'rch', 'RcHm_v2.0_Chr6g0278831' => 'rch', 'Rhsim02G0130400' => 'rsi', 'Rhsim02G0171100' => 'rsi', 'Rhsim05G0053000' => 'rsi', 'Rhsim05G0053100' => 'rsi', 'Rhsim06G0096500' => 'rsi', 'Rhsim06G0096600' => 'rsi', 'Rhsim06G0199100' => 'rsi', 'Rhsim12G0062300' => 'rsi', 'Rhsim12G0062800' => 'rsi', 'Sabra02G0118600' => 'sbr', 'Sabra04G0027300' => 'sbr', 'Sabra04G0119500' => 'sbr', 'Sabra08G0112500' => 'sbr', 'Sabra11G0036800' => 'sbr', 'Sabra11G0103800' => 'sbr', 'Sabra13G0096300' => 'sbr', 'Sabra16G0262300' => 'sbr', 'Sabra18G0091700' => 'sbr', 'Sabra19G0095400' => 'sbr', 'SalBow6G3080' => 'sbo', 'SalBow7G1157' => 'sbo', 'SalBow7G2123' => 'sbo', 'SalBow7G2285' => 'sbo', 'SalBow7G3537' => 'sbo', 'SalBow8G2947' => 'sbo', 'SalBow8G4463' => 'sbo', 'SalBow8G5466' => 'sbo', 'Sc01g0001750' => 'sci', 'Sc02g0006640' => 'sci', 'Sc02g0006670' => 'sci', 'Sc04g0008220' => 'sci', 'Sc05g0006190' => 'sci', 'Sc08g0002760' => 'sci', 'Sc17g0006170' => 'sci', 'Sc22g0002050' => 'sci', 'Sc23g0001190' => 'sci', 'Sc24g0000980' => 'sci', 'Sed0006245' => 'sed', 'Sed0007543' => 'sed', 'Sed0009411' => 'sed', 'Sed0010765' => 'sed', 'Sed0012944' => 'sed', 'Sed0014682' => 'sed', 'Sed0016174' => 'sed', 'Sed0016796' => 'sed', 'Sed0020317' => 'sed', 'Sed0021467' => 'sed', 'SEGI_01316' => 'sgi', 'SEGI_03374' => 'sgi', 'SEGI_16265' => 'sgi', 'SEGI_18569' => 'sgi', 'SEGI_20351' => 'sgi', 'SEGI_26395' => 'sgi', 'SEGI_29469' => 'sgi', 'SEGI_34771' => 'sgi', 'SEGI_36769' => 'sgi', 'SEGI_37139' => 'sgi', 'SGA_v2.0_scaffold100G29687' => 'sas', 'SGA_v2.0_scaffold118G32472' => 'sas', 'SGA_v2.0_scaffold14G07051' => 'sas', 'SGA_v2.0_scaffold183G39845' => 'sas', 'SGA_v2.0_scaffold1G00174' => 'sas', 'SGA_v2.0_scaffold22G09714' => 'sas', 'SGA_v2.0_scaffold333G48992' => 'sas', 'SGA_v2.0_scaffold46G17491' => 'sas', 'SGA_v2.0_scaffold49G18294' => 'sas', 'SGA_v2.0_scaffold63G21658' => 'sas', 'SHI01741' => 'shi', 'SHI05771' => 'shi', 'SHI18077' => 'shi', 'SHI20525' => 'shi', 'SHI20527' => 'shi', 'SHI20528' => 'shi', 'SMO172G0185' => 'smo', 'SMO198G0020' => 'smo', 'SMO351G0006' => 'smo', 'SMO356G0118' => 'smo', 'SMO358G0296' => 'smo', 'SMO367G0079' => 'smo', 'SMO367G1277' => 'smo', 'Solyc01g014220.3' => 'sly', 'Solyc01g111770.2' => 'sly', 'Solyc02g078180.3' => 'sly', 'Solyc03g006430.3' => 'sly', 'Solyc03g006456.1' => 'sly', 'Solyc03g079860.2' => 'sly', 'Solyc04g079770.3' => 'sly', 'Solyc05g007430.4' => 'sly', 'Solyc07g063150.3' => 'sly', 'Solyc08g016620.3' => 'sly', 'Solyc09g057590.3' => 'sly', 'Solyc09g057600.1' => 'sly', 'Solyc10g009050.3' => 'sly', 'Solyc11g017420.2' => 'sly', 'Sopen01g053810' => 'spe', 'Sopen02g023040' => 'spe', 'Sopen03g002440' => 'spe', 'Sopen04g033350' => 'spe', 'Sopen05g003310' => 'spe', 'Sopen07g004050' => 'spe', 'Sopen07g031340' => 'spe', 'Sopen08g006990' => 'spe', 'Sopen10g004830' => 'spe', 'Sopen11g009370' => 'spe', 'Sp1g24450' => 'spa', 'Sp1g29670' => 'spa', 'Sp1g39600' => 'spa', 'Sp2g11080' => 'spa', 'Sp2g13970' => 'spa', 'Sp4g16130' => 'spa', 'Sp6g13080' => 'spa', 'Sp7g37270' => 'spa', 'TAR371G0065' => 'tar', 'TAR376G0340' => 'tar', 'TAR376G0435' => 'tar', 'TAR381G0002' => 'tar', 'TAR381G1236' => 'tar', 'TAR624G0055' => 'tar', 'TAR624G0324' => 'tar', 'TAR624G0696' => 'tar', 'TAR624G0906' => 'tar', 'TAR625G0107' => 'tar', 'TAR626G0015' => 'tar', 'TAR626G1356' => 'tar', 'TAR627G0888' => 'tar', 'TAR628G0399' => 'tar', 'TAR628G1327' => 'tar', 'TAR629G2831' => 'tar', 'TAR629G2874' => 'tar', 'TAR633G1432' => 'tar', 'TAR633G2771' => 'tar', 'THA.LOC104803394' => 'tha', 'THA.LOC104805153' => 'tha', 'THA.LOC104806784' => 'tha', 'THA.LOC104810473' => 'tha', 'THA.LOC104813100' => 'tha', 'THA.LOC104814215' => 'tha', 'THA.LOC104815554' => 'tha', 'THA.LOC104820544' => 'tha', 'THA.LOC104824754' => 'tha', 'THA.LOC104827717' => 'tha', 'Thecc.02G031400' => 'tca', 'Thecc.02G055900' => 'tca', 'Thecc.02G350800' => 'tca', 'Thecc.06G150900' => 'tca', 'Thecc.06G186600' => 'tca', 'Thecc.07G089600' => 'tca', 'Thecc.08G020400' => 'tca', 'Thecc.08G182100' => 'tca', 'Thhalv10000873m.g' => 'esa', 'Thhalv10004185m.g' => 'esa', 'Thhalv10006981m.g' => 'esa', 'Thhalv10007204m.g' => 'esa', 'Thhalv10011374m.g' => 'esa', 'Thhalv10013482m.g' => 'esa', 'Thhalv10017801m.g' => 'esa', 'Thhalv10024983m.g' => 'esa', 'TPR.G12072' => 'tpr', 'TPR.G15769' => 'tpr', 'TPR.G16504' => 'tpr', 'TPR.G16506' => 'tpr', 'TPR.G24345' => 'tpr', 'TPR.G26666' => 'tpr', 'TPR.G27320' => 'tpr', 'TPR.G31819' => 'tpr', 'TPR.G38879' => 'tpr', 'TPR.G39015' => 'tpr', 'TPR.G8819' => 'tpr', 'TWI09G0924' => 'twi', 'TWI12G0811' => 'twi', 'TWI12G1294' => 'twi', 'TWI31G0150' => 'twi', 'TWI36G1262' => 'twi', 'TWI38G1287' => 'twi', 'TWI38G1633' => 'twi', 'TWI38G1982' => 'twi', 'TWI39G0116' => 'twi', 'TWI60G1011' => 'twi', 'TWI63G0171' => 'twi', 'TWI73G0839' => 'twi', 'TWI79G1511' => 'twi', 'unitig_0.g915' => 'ugi', 'unitig_0.g916' => 'ugi', 'unitig_21.g20219' => 'ugi', 'unitig_21.g20416' => 'ugi', 'unitig_578.g16132' => 'ugi', 'unitig_578.g16718' => 'ugi', 'unitig_62.g23481' => 'ugi', 'unitig_744.g24535' => 'ugi', 'unitig_749.g13525' => 'ugi', 'vmacro01248' => 'vma', 'vmacro02290' => 'vma', 'vmacro10946' => 'vma', 'vmacro11865' => 'vma', 'vmacro12493' => 'vma', 'vmacro17322' => 'vma', 'vmacro21599' => 'vma', 'vmacro23041' => 'vma', 'VMungo0251G0004' => 'vmu', 'VMungo0251G2639' => 'vmu', 'VMungo0251G2967' => 'vmu', 'VMungo0540G0864' => 'vmu', 'VMungo0540G1569' => 'vmu', 'VMungo0647G0317' => 'vmu', 'VMungo0720G1373' => 'vmu', 'VMungo0720G1508' => 'vmu', 'VMungo1080G0485' => 'vmu', 'VMungo1215G3177' => 'vmu', 'Zm00001eb112600' => 'zma', 'Zm00001eb120220' => 'zma', 'Zm00001eb153240' => 'zma', 'Zm00001eb168880' => 'zma', 'Zm00001eb213920' => 'zma', 'Zm00001eb228280' => 'zma', 'Zm00001eb254580' => 'zma', 'Zm00001eb272180' => 'zma', 'Zm00001eb293190' => 'zma', 'Zm00001eb322930' => 'zma', 'Zm00001eb353360' => 'zma', 'Zm00001eb353390' => 'zma', 'Zm00001eb353430' => 'zma', 'Zm00001eb353440' => 'zma', 'Zm00001eb353780' => 'zma' ), 'gf_id' => 'HOM05D000499', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000499' ), 'data_identifier' => 'HOM05D000499', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000499', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1066', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p29780' => 'bna', 'A02p33180' => 'bna', 'A03p16470' => 'bna', 'A03p66010' => 'bna', 'A04p25970' => 'bna', 'A06p01270' => 'bna', 'A06p46080' => 'bna', 'A07p11400' => 'bna', 'A08p01840' => 'bna', 'A08p08230' => 'bna', 'A08p25740' => 'bna', 'A09p32070' => 'bna', 'A09p37830' => 'bna', 'A09p42840' => 'bna', 'A09p42850' => 'bna', 'Aa31LG10G2060' => 'aar', 'Aa31LG2G7410' => 'aar', 'Aa31LG6G10200' => 'aar', 'Aa31LG6G16680' => 'aar', 'Aa31LG6G8470' => 'aar', 'Aa31LG9G12730' => 'aar', 'Aa31LG9G13680' => 'aar', 'Aa31LG9G14920' => 'aar', 'Aa31LG9G6650' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4977' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5467' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3254' => 'aag', 'Actinidia02578' => 'ach', 'Actinidia07693' => 'ach', 'Actinidia08413' => 'ach', 'Actinidia08414' => 'ach', 'Actinidia15289' => 'ach', 'Actinidia19871' => 'ach', 'Actinidia21475' => 'ach', 'Actinidia22576' => 'ach', 'Actinidia28327' => 'ach', 'Actinidia32491' => 'ach', 'Actinidia39463' => 'ach', 'Actinidia39571' => 'ach', 'Ah.01g013750' => 'amhyb', 'Ah.01g023210' => 'amhyb', 'Ah.04g164850' => 'amhyb', 'Ah.05g178060' => 'amhyb', 'Ah.07g204270' => 'amhyb', 'Ah.07g208480' => 'amhyb', 'Ah.09g237410' => 'amhyb', 'Ah.14g089460' => 'amhyb', 'AL1G41790' => 'aly', 'AL1G49050' => 'aly', 'AL1G53810' => 'aly', 'AL1G61400' => 'aly', 'AL4G18580' => 'aly', 'AL5G12510' => 'aly', 'AL5G12540' => 'aly', 'AL6G43230' => 'aly', 'AL7G10370' => 'aly', 'AL7G19250' => 'aly', 'AL8G12240' => 'aly', 'AL8G18540' => 'aly', 'Aqoxy1G02409' => 'aox', 'Aqoxy2G03993' => 'aox', 'Aqoxy3G03357' => 'aox', 'Aqoxy4G00785' => 'aox', 'Aqoxy5G02598' => 'aox', 'Aqoxy6G00132' => 'aox', 'Aqoxy7G01776' => 'aox', 'Aqoxy7G02316' => 'aox', 'Aqoxy7G03973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.12AFKW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B8730' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27IQR1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3F75VG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3RE0GA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41TCQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.527VTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FIR39' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5W8UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DA38EV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ63HS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H1I32C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HC27T5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4M8AP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7N3CZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9UVDZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LS1NQA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT1D4B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SKC4TM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCFV76' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF9Q1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQWD9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1ZM88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WE07RT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YCK7VH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJE6Q6' => 'arhy', 'AT1G28240' => 'ath', 'AT1G34550' => 'ath', 'AT1G53040' => 'ath', 'AT2G02910' => 'ath', 'AT4G09630' => 'ath', 'AT4G38500' => 'ath', 'AT5G42660' => 'ath', 'AT5G46220' => 'ath', 'ATR0152G026' => 'atr', 'ATR0564G343' => 'atr', 'ATR0706G151' => 'atr', 'ATR0733G207' => 'atr', 'ATR0751G234' => 'atr', 'ATR0807G048' => 'atr', 'ATR1091G084' => 'atr', 'Atru.chr10.1229' => 'acertr', 'Atru.chr10.1230' => 'acertr', 'Atru.chr10.1874' => 'acertr', 'Atru.chr11.1808' => 'acertr', 'Atru.chr13.1795' => 'acertr', 'Atru.chr13.570' => 'acertr', 'Atru.chr2.2608' => 'acertr', 'Atru.chr2.2609' => 'acertr', 'Atru.chr5.3428' => 'acertr', 'Atru.chr8.1171' => 'acertr', 'AUR62004651' => 'cqu', 'AUR62008675' => 'cqu', 'AUR62010014' => 'cqu', 'AUR62013004' => 'cqu', 'AUR62014825' => 'cqu', 'AUR62015015' => 'cqu', 'AUR62015151' => 'cqu', 'AUR62017020' => 'cqu', 'AUR62019422' => 'cqu', 'AUR62023570' => 'cqu', 'AUR62025571' => 'cqu', 'AUR62029098' => 'cqu', 'AUR62033863' => 'cqu', 'AUR62034296' => 'cqu', 'AUR62040075' => 'cqu', 'BcaB02g07334' => 'bca', 'BcaB02g10575' => 'bca', 'BcaB03g12119' => 'bca', 'BcaB03g12120' => 'bca', 'BcaB03g13945' => 'bca', 'BcaB04g17123' => 'bca', 'BcaB04g17867' => 'bca', 'BcaB04g19839' => 'bca', 'BcaB07g30317' => 'bca', 'BcaB07g32432' => 'bca', 'BcaB07g33362' => 'bca', 'BcaB08g36611' => 'bca', 'BcaC01g00028' => 'bca', 'BcaC01g01356' => 'bca', 'BcaC01g02034' => 'bca', 'BcaC01g06051' => 'bca', 'BcaC03g16839' => 'bca', 'BcaC03g17176' => 'bca', 'BcaC05g26829' => 'bca', 'BcaC06g31490' => 'bca', 'BcaC06g35344' => 'bca', 'BcaC06g36570' => 'bca', 'BcaC07g37537' => 'bca', 'BcaC08g43491' => 'bca', 'BcaC08g43773' => 'bca', 'BcaNung00234' => 'bca', 'BcaNung01982' => 'bca', 'BcaNung03707' => 'bca', 'BcaNung06454' => 'bca', 'BolC2t10762H' => 'bol', 'BolC2t11191H' => 'bol', 'BolC3t14322H' => 'bol', 'BolC3t19747H' => 'bol', 'BolC3t21425H' => 'bol', 'BolC4t27800H' => 'bol', 'BolC5t31423H' => 'bol', 'BolC6t35951H' => 'bol', 'BolC6t36282H' => 'bol', 'BolC7t40678H' => 'bol', 'BolC7t40679H' => 'bol', 'BolC7t42222H' => 'bol', 'BolC7t43492H' => 'bol', 'BolC7t46785H' => 'bol', 'BolC8t47853H' => 'bol', 'BolC9t56805H' => 'bol', 'BraA02t08000Z' => 'bra', 'BraA02t08341Z' => 'bra', 'BraA03t10936Z' => 'bra', 'BraA03t15657Z' => 'bra', 'BraA04t18100Z' => 'bra', 'BraA05t20523Z' => 'bra', 'BraA06t23353Z' => 'bra', 'BraA06t27473Z' => 'bra', 'BraA06t27769Z' => 'bra', 'BraA07t28928Z' => 'bra', 'BraA08t32236Z' => 'bra', 'BraA08t32841Z' => 'bra', 'BraA08t34524Z' => 'bra', 'BraA09t38742Z' => 'bra', 'BraA09t39295Z' => 'bra', 'C02p47180' => 'bna', 'C02p50990' => 'bna', 'C03p19360' => 'bna', 'C03p74950' => 'bna', 'C03p91000' => 'bna', 'C04p63260' => 'bna', 'C05p27050' => 'bna', 'C06p08750' => 'bna', 'C06p11490' => 'bna', 'C07p02820' => 'bna', 'C07p17180' => 'bna', 'C07p29440' => 'bna', 'C07p63730' => 'bna', 'C09p39260' => 'bna', 'CAN.G1164.34' => 'can', 'CAN.G1164.39' => 'can', 'CAN.G1530.3' => 'can', 'CAN.G162.61' => 'can', 'CAN.G176.6' => 'can', 'CAN.G289.49' => 'can', 'CAN.G370.21' => 'can', 'CAN.G370.22' => 'can', 'CAN.G371.117' => 'can', 'CAN.G58.37' => 'can', 'CAN.G588.98' => 'can', 'CANSAT21G2266' => 'cansat', 'CANSAT25G2799' => 'cansat', 'CANSAT35G0862' => 'cansat', 'CANSAT35G1704' => 'cansat', 'CANSAT35G1760' => 'cansat', 'CANSAT56G3971' => 'cansat', 'CANSAT56G4116' => 'cansat', 'CANSAT80G1259' => 'cansat', 'CARHR027730' => 'chi', 'CARHR033880' => 'chi', 'CARHR043270' => 'chi', 'CARHR145330' => 'chi', 'CARHR145340' => 'chi', 'CARHR175570' => 'chi', 'CARHR181570' => 'chi', 'CARHR258470' => 'chi', 'CARHR260490' => 'chi', 'CARHR294220' => 'chi', 'Carub.0001s2668' => 'cru', 'Carub.0001s3257' => 'cru', 'Carub.0001s4220' => 'cru', 'Carub.0005s0179' => 'cru', 'Carub.0006s2807' => 'cru', 'Carub.0007s0039' => 'cru', 'Carub.0008s0169' => 'cru', 'Carub.0008s0636' => 'cru', 'Ca_00338_v3' => 'car', 'Ca_00542_v3' => 'car', 'Ca_01844_v3' => 'car', 'Ca_10611_v3' => 'car', 'Ca_13326_v3' => 'car', 'Ca_17944_v3' => 'car', 'Ca_18546_v3' => 'car', 'Ca_24219_v3' => 'car', 'Ca_29972_v3' => 'car', 'CBR_g3681' => 'cbr', 'CBR_g40021' => 'cbr', 'Cc01_g08140' => 'ccan', 'Cc02_g13410' => 'ccan', 'Cc02_g37480' => 'ccan', 'Cc05_g12030' => 'ccan', 'Cc09_g03370' => 'ccan', 'Cc09_g10300' => 'ccan', 'Cc10_g03530' => 'ccan', 'Cc10_g11380' => 'ccan', 'CDE01G0176' => 'cde', 'CDE02G0675' => 'cde', 'CDE02G0942' => 'cde', 'CDE02G1153' => 'cde', 'CDE02G4177' => 'cde', 'CDE04G2117' => 'cde', 'CDE04G2736' => 'cde', 'CDE08G1161' => 'cde', 'CDE09G1238' => 'cde', 'Cfa000467' => 'cfa', 'Cfa000947' => 'cfa', 'Cfa004969' => 'cfa', 'Cfa005284' => 'cfa', 'Cfa008993' => 'cfa', 'Cfa018187' => 'cfa', 'Cfa018454' => 'cfa', 'Cfa020585' => 'cfa', 'Ciclev10000424m.g' => 'ccl', 'Ciclev10003605m.g' => 'ccl', 'Ciclev10007828m.g' => 'ccl', 'Ciclev10014620m.g' => 'ccl', 'Ciclev10015169m.g' => 'ccl', 'Ciclev10018291m.g' => 'ccl', 'Ciclev10028256m.g' => 'ccl', 'Ciclev10033822m.g' => 'ccl', 'CiPaw.05G060300' => 'cil', 'CiPaw.05G085000' => 'cil', 'CiPaw.06G083700' => 'cil', 'CiPaw.06G120300' => 'cil', 'CiPaw.09G060500' => 'cil', 'CiPaw.09G123800' => 'cil', 'CiPaw.11G169700' => 'cil', 'CiPaw.12G118300' => 'cil', 'CiPaw.15G071000' => 'cil', 'CiPaw.15G081900' => 'cil', 'ClCG01G024610' => 'cla', 'ClCG03G006070' => 'cla', 'ClCG05G019250' => 'cla', 'ClCG09G009500' => 'cla', 'ClCG11G008200' => 'cla', 'ClCG11G018080' => 'cla', 'COL.COLO4_17373' => 'col', 'COL.COLO4_22994' => 'col', 'COL.COLO4_26389' => 'col', 'COL.COLO4_27170' => 'col', 'COL.COLO4_31074' => 'col', 'COL.COLO4_31465' => 'col', 'COL.COLO4_36438' => 'col', 'COL.COLO4_36439' => 'col', 'Cpa.g.c38781' => 'cpa', 'Cpa.g.sc128.12' => 'cpa', 'Cpa.g.sc166.7' => 'cpa', 'Cpa.g.sc166.8' => 'cpa', 'Cpa.g.sc20.111' => 'cpa', 'Cpa.g.sc27.31' => 'cpa', 'Cpa.g.sc64.36' => 'cpa', 'Cpa.g.sc64.37' => 'cpa', 'Cpa.g.sc66.49' => 'cpa', 'Cpa.g.sc80.64' => 'cpa', 'CsaV3_1G012320' => 'csa', 'CsaV3_2G008480' => 'csa', 'CsaV3_2G033450' => 'csa', 'CsaV3_3G044830' => 'csa', 'CsaV3_4G033710' => 'csa', 'CsaV3_6G051730' => 'csa', 'CsaV3_7G025350' => 'csa', 'CSS0001067' => 'camsi', 'CSS0005996' => 'camsi', 'CSS0006590' => 'camsi', 'CSS0009673' => 'camsi', 'CSS0010201' => 'camsi', 'CSS0010549' => 'camsi', 'CSS0011364' => 'camsi', 'CSS0014473' => 'camsi', 'CSS0014961' => 'camsi', 'CSS0020191' => 'camsi', 'CSS0021165' => 'camsi', 'CSS0022306' => 'camsi', 'CSS0030591' => 'camsi', 'CSS0030696' => 'camsi', 'CSS0032653' => 'camsi', 'CSS0037487' => 'camsi', 'CSS0041102' => 'camsi', 'CSS0041261' => 'camsi', 'CSS0046246' => 'camsi', 'CSS0049256' => 'camsi', 'DCAR_004075' => 'dca', 'DCAR_011538' => 'dca', 'DCAR_019553' => 'dca', 'DCAR_020952' => 'dca', 'DCAR_021739' => 'dca', 'DCAR_027407' => 'dca', 'DCAR_027913' => 'dca', 'DCAR_028066' => 'dca', 'Dinv05899' => 'din', 'Dinv07563' => 'din', 'Dinv08010' => 'din', 'Dinv14125' => 'din', 'Dinv20172' => 'din', 'Dinv30743' => 'din', 'Dinv31229' => 'din', 'Dinv34162' => 'din', 'Dinv36028' => 'din', 'Dinv39368' => 'din', 'Dinv40565' => 'din', 'Dinv41706' => 'din', 'Duzib052G0089' => 'dzi', 'Duzib116G0641' => 'dzi', 'Duzib132G0069' => 'dzi', 'Duzib132G1219' => 'dzi', 'Duzib147G0278' => 'dzi', 'Duzib160G0480' => 'dzi', 'Duzib170G0661' => 'dzi', 'Duzib177G0591' => 'dzi', 'Duzib187G1353' => 'dzi', 'Duzib192G0858' => 'dzi', 'Duzib192G0883' => 'dzi', 'Duzib213G0506' => 'dzi', 'Duzib235G0289' => 'dzi', 'Duzib251G0422' => 'dzi', 'ECA232G3898' => 'eca', 'ECA233G5950' => 'eca', 'ECA234G1699' => 'eca', 'ECA234G2421' => 'eca', 'ECA236G0426' => 'eca', 'ECA236G4331' => 'eca', 'ECA248G2573' => 'eca', 'EL10Ac1g00077' => 'bvu', 'EL10Ac1g01746' => 'bvu', 'EL10Ac2g03464' => 'bvu', 'EL10Ac4g08176' => 'bvu', 'EL10Ac7g17521' => 'bvu', 'EL10Ac8g20386' => 'bvu', 'EL10Ac9g21343' => 'bvu', 'EL10Ac9g22688' => 'bvu', 'Eucgr.B03434' => 'egr', 'Eucgr.D00618' => 'egr', 'Eucgr.E02395' => 'egr', 'Eucgr.F01129' => 'egr', 'Eucgr.F02622' => 'egr', 'Eucgr.F04207' => 'egr', 'FAN01G0570' => 'fan', 'FAN03G3351' => 'fan', 'FAN06G3702' => 'fan', 'FAN07G2149' => 'fan', 'FAN10G3758' => 'fan', 'FAN11G1170' => 'fan', 'FAN11G2050' => 'fan', 'FAN11G2724' => 'fan', 'FAN12G1700' => 'fan', 'FAN12G2028' => 'fan', 'FAN15G1160' => 'fan', 'FAN15G3063' => 'fan', 'FAN16G2540' => 'fan', 'FAN16G3077' => 'fan', 'FAN16G3624' => 'fan', 'FAN17G0221' => 'fan', 'FAN20G2492' => 'fan', 'FAN20G2905' => 'fan', 'FAN21G0548' => 'fan', 'FAN21G1300' => 'fan', 'FAN22G0077' => 'fan', 'FAN22G1315' => 'fan', 'FAN24G1280' => 'fan', 'FAN24G1445' => 'fan', 'FAN24G3527' => 'fan', 'FAN25G0464' => 'fan', 'FAN25G2885' => 'fan', 'FAN25G3270' => 'fan', 'FAN27G1101' => 'fan', 'FAN27G2846' => 'fan', 'FAN27G3524' => 'fan', 'FvH4_2g11770' => 'fve', 'FvH4_2g15630' => 'fve', 'FvH4_3g05570' => 'fve', 'FvH4_3g09110' => 'fve', 'FvH4_3g19940' => 'fve', 'FvH4_4g04821' => 'fve', 'FvH4_4g31480' => 'fve', 'FvH4_7g01740' => 'fve', 'Glyma.05G130400' => 'gma', 'Glyma.05G156400' => 'gma', 'Glyma.07G197000' => 'gma', 'Glyma.08G085151' => 'gma', 'Glyma.08G114500' => 'gma', 'Glyma.08G300400' => 'gma', 'Glyma.10G215800' => 'gma', 'Glyma.12G224400' => 'gma', 'Glyma.13G179300' => 'gma', 'Glyma.13G218151' => 'gma', 'Glyma.13G238800' => 'gma', 'Glyma.13G276900' => 'gma', 'Glyma.14G078200' => 'gma', 'Glyma.15G074500' => 'gma', 'Glyma.15G094100' => 'gma', 'Glyma.17G247200' => 'gma', 'Glyma.18G120100' => 'gma', 'Glyma.20G176000' => 'gma', 'Gohir.A01G063600' => 'ghi', 'Gohir.A01G170301' => 'ghi', 'Gohir.A02G060500' => 'ghi', 'Gohir.A05G133850' => 'ghi', 'Gohir.A05G161400' => 'ghi', 'Gohir.A06G012900' => 'ghi', 'Gohir.A06G035901' => 'ghi', 'Gohir.A06G127100' => 'ghi', 'Gohir.A06G210500' => 'ghi', 'Gohir.A08G008650' => 'ghi', 'Gohir.A09G072700' => 'ghi', 'Gohir.A09G088301' => 'ghi', 'Gohir.A10G040600' => 'ghi', 'Gohir.A12G036300' => 'ghi', 'Gohir.A12G143350' => 'ghi', 'Gohir.A12G165500' => 'ghi', 'Gohir.A13G145700' => 'ghi', 'Gohir.D01G050000' => 'ghi', 'Gohir.D01G051366' => 'ghi', 'Gohir.D01G161350' => 'ghi', 'Gohir.D02G065900' => 'ghi', 'Gohir.D05G164200' => 'ghi', 'Gohir.D05G355500' => 'ghi', 'Gohir.D06G010400' => 'ghi', 'Gohir.D06G111250' => 'ghi', 'Gohir.D06G132000' => 'ghi', 'Gohir.D06G210500' => 'ghi', 'Gohir.D07G165675' => 'ghi', 'Gohir.D08G062240' => 'ghi', 'Gohir.D08G086101' => 'ghi', 'Gohir.D08G138060' => 'ghi', 'Gohir.D09G072300' => 'ghi', 'Gohir.D10G041400' => 'ghi', 'Gohir.D11G191020' => 'ghi', 'Gohir.D11G212066' => 'ghi', 'Gohir.D12G036300' => 'ghi', 'Gohir.D12G168600' => 'ghi', 'Gohir.D13G150600' => 'ghi', 'Gorai.001G057300' => 'gra', 'Gorai.002G069900' => 'gra', 'Gorai.002G200000' => 'gra', 'Gorai.003G067600' => 'gra', 'Gorai.005G074800' => 'gra', 'Gorai.006G087300' => 'gra', 'Gorai.008G037500' => 'gra', 'Gorai.008G181400' => 'gra', 'Gorai.009G169400' => 'gra', 'Gorai.009G387900' => 'gra', 'Gorai.010G013300' => 'gra', 'Gorai.010G153800' => 'gra', 'Gorai.010G255800' => 'gra', 'Gorai.011G043700' => 'gra', 'Gorai.011G198900' => 'gra', 'Gorai.013G168400' => 'gra', 'GSVIVG01005212001' => 'vvi', 'GSVIVG01006163001' => 'vvi', 'GSVIVG01009625001' => 'vvi', 'GSVIVG01014338001' => 'vvi', 'GSVIVG01020005001' => 'vvi', 'GSVIVG01021450001' => 'vvi', 'GSVIVG01023975001' => 'vvi', 'GSVIVG01034490001' => 'vvi', 'HanXRQChr04g0112071' => 'han', 'HanXRQChr05g0131151' => 'han', 'HanXRQChr09g0262371' => 'han', 'HanXRQChr09g0268401' => 'han', 'HanXRQChr10g0279241' => 'han', 'HanXRQChr10g0297961' => 'han', 'HanXRQChr11g0326231' => 'han', 'HanXRQChr11g0328471' => 'han', 'HanXRQChr16g0507941' => 'han', 'HanXRQChr17g0560211' => 'han', 'Haze_02108' => 'cav', 'Haze_02428' => 'cav', 'Haze_05593' => 'cav', 'Haze_06448' => 'cav', 'Haze_09427' => 'cav', 'Haze_12022' => 'cav', 'Haze_17612' => 'cav', 'Haze_17928' => 'cav', 'Hma1.2p1_0032F.1_g019250' => 'hma', 'Hma1.2p1_0163F.1_g072690' => 'hma', 'Hma1.2p1_0265F.1_g106710' => 'hma', 'Hma1.2p1_0286F.1_g113970' => 'hma', 'Hma1.2p1_0363F.1_g136640' => 'hma', 'Hma1.2p1_0584F.1_g183470' => 'hma', 'Hma1.2p1_0885F.1_g232570' => 'hma', 'HPP92_006022' => 'vpl', 'HPP92_007320' => 'vpl', 'HPP92_011521' => 'vpl', 'HPP92_019387' => 'vpl', 'HPP92_024038' => 'vpl', 'Hund05891' => 'sun', 'Hund06450' => 'sun', 'Hund12053' => 'sun', 'Hund16800' => 'sun', 'Hund21222' => 'sun', 'Hund22896' => 'sun', 'Hund23746' => 'sun', 'Hund27083' => 'sun', 'Lalb_Chr02g0141831' => 'lal', 'Lalb_Chr02g0141841' => 'lal', 'Lalb_Chr05g0220411' => 'lal', 'Lalb_Chr06g0162081' => 'lal', 'Lalb_Chr09g0327651' => 'lal', 'Lalb_Chr13g0295051' => 'lal', 'Lalb_Chr15g0086801' => 'lal', 'Lalb_Chr16g0383781' => 'lal', 'Lalb_Chr16g0383791' => 'lal', 'Lalb_Chr18g0055441' => 'lal', 'Lalb_Chr18g0059611' => 'lal', 'Lalb_Chr20g0109661' => 'lal', 'Lalb_Chr20g0109831' => 'lal', 'Lalb_Chr20g0121871' => 'lal', 'Lalb_Chr22g0355361' => 'lal', 'Lalb_Chr25g0286371' => 'lal', 'Lj1A1187G43' => 'lonja', 'Lj1A1205T50' => 'lonja', 'Lj1A800G33' => 'lonja', 'Lj1C1187T7' => 'lonja', 'Lj1C843T11' => 'lonja', 'Lj1g0010940' => 'lja', 'Lj2A288T69' => 'lonja', 'Lj3g0024276' => 'lja', 'Lj4A47T76' => 'lonja', 'Lj4g0005805' => 'lja', 'Lj4g0006097' => 'lja', 'Lj4g0008528' => 'lja', 'Lj4g0024907' => 'lja', 'Lj5g0012472' => 'lja', 'Lj5g0018648' => 'lja', 'Lj6C789G1' => 'lonja', 'Lj6g0004000' => 'lja', 'Lj7A292G67' => 'lonja', 'Lj7A292T64' => 'lonja', 'Lj9A400T58' => 'lonja', 'Lsat_1_v5_gn_1_126181' => 'lsa', 'Lsat_1_v5_gn_4_123041' => 'lsa', 'Lsat_1_v5_gn_4_133620' => 'lsa', 'Lsat_1_v5_gn_4_53221' => 'lsa', 'Lsat_1_v5_gn_4_71961' => 'lsa', 'Lsat_1_v5_gn_7_105241' => 'lsa', 'Lsat_1_v5_gn_7_21361' => 'lsa', 'Lsat_1_v5_gn_7_28860' => 'lsa', 'Lsat_1_v5_gn_7_31260' => 'lsa', 'Lsat_1_v5_gn_8_52801' => 'lsa', 'Manes.02G191400' => 'mes', 'Manes.03G110100' => 'mes', 'Manes.04G071100' => 'mes', 'Manes.05G100500' => 'mes', 'Manes.05G164700' => 'mes', 'Manes.15G087000' => 'mes', 'Manes.15G121500' => 'mes', 'Manes.16G028300' => 'mes', 'Manes.17G046100' => 'mes', 'Manes.17G069800' => 'mes', 'Manes.18G100500' => 'mes', 'Mapoly0002s0109' => 'mpo', 'Mapoly0024s0007' => 'mpo', 'Mapoly0089s0032' => 'mpo', 'MBI04_g42241_MAGBIO' => 'mbi', 'MBI05_g11988_MAGBIO' => 'mbi', 'MBI05_g35452_MAGBIO' => 'mbi', 'MBI07_g30179_MAGBIO' => 'mbi', 'MBI07_g35859_MAGBIO' => 'mbi', 'MBI07_g35860_MAGBIO' => 'mbi', 'MBI07_g37166_MAGBIO' => 'mbi', 'MBI08_g18172_MAGBIO' => 'mbi', 'MBI09_g08441_MAGBIO' => 'mbi', 'MBI13_g01676_MAGBIO' => 'mbi', 'MBI14_g42955_MAGBIO' => 'mbi', 'MBI16_g13161_MAGBIO' => 'mbi', 'MBI17_g27204_MAGBIO' => 'mbi', 'MBI19_g21595_MAGBIO' => 'mbi', 'MD00G1148400' => 'mdo', 'MD02G1301200' => 'mdo', 'MD03G1227800' => 'mdo', 'MD05G1041100' => 'mdo', 'MD05G1124800' => 'mdo', 'MD05G1284000' => 'mdo', 'MD05G1338800' => 'mdo', 'MD05G1338900' => 'mdo', 'MD07G1022800' => 'mdo', 'MD10G1047500' => 'mdo', 'MD10G1127500' => 'mdo', 'MD10G1262300' => 'mdo', 'MD10G1293800' => 'mdo', 'MD16G1074300' => 'mdo', 'Medtr1g021670' => 'mtr', 'Medtr1g096320' => 'mtr', 'Medtr2g013690' => 'mtr', 'Medtr2g019450' => 'mtr', 'Medtr2g085170' => 'mtr', 'Medtr4g088785' => 'mtr', 'Medtr8g055930' => 'mtr', 'Medtr8g085850' => 'mtr', 'MELO3C002605.2' => 'cme', 'MELO3C003891.2' => 'cme', 'MELO3C004012.2' => 'cme', 'MELO3C007134.2' => 'cme', 'MELO3C008118.2' => 'cme', 'MELO3C016700.2' => 'cme', 'MELO3C024127.2' => 'cme', 'MELO3C033361.2' => 'cme', 'MELO3C033362.2' => 'cme', 'Migut.C00430' => 'egut', 'Migut.C01246' => 'egut', 'Migut.E00101' => 'egut', 'Migut.H01486' => 'egut', 'Migut.H01939' => 'egut', 'Migut.K00360' => 'egut', 'Migut.M00910' => 'egut', 'Migut.M01139' => 'egut', 'Migut.N02677' => 'egut', 'MSTRG.13252' => 'ama', 'MSTRG.14701' => 'ama', 'MSTRG.1521' => 'ama', 'MSTRG.15884' => 'ama', 'MSTRG.16242' => 'ama', 'MSTRG.22285' => 'ama', 'MSTRG.22444' => 'ama', 'MSTRG.2349' => 'ama', 'MSTRG.26308' => 'ama', 'MSTRG.28296' => 'ama', 'MSTRG.9895' => 'ama', 'Nitab4.5_0000110g0060' => 'nta', 'Nitab4.5_0000420g0130' => 'nta', 'Nitab4.5_0000422g0030' => 'nta', 'Nitab4.5_0000560g0180' => 'nta', 'Nitab4.5_0000703g0100' => 'nta', 'Nitab4.5_0000786g0200' => 'nta', 'Nitab4.5_0001336g0020' => 'nta', 'Nitab4.5_0001796g0030' => 'nta', 'Nitab4.5_0003348g0060' => 'nta', 'Nitab4.5_0003698g0040' => 'nta', 'Nitab4.5_0003942g0090' => 'nta', 'Nitab4.5_0004775g0070' => 'nta', 'Nitab4.5_0004864g0030' => 'nta', 'Nitab4.5_0005615g0020' => 'nta', 'Nitab4.5_0009288g0030' => 'nta', 'Nitab4.5_0009341g0010' => 'nta', 'Nitab4.5_0009535g0010' => 'nta', 'Nn1g03995' => 'nnu', 'Nn1g04100' => 'nnu', 'Nn1g06530' => 'nnu', 'Nn3g16404' => 'nnu', 'Nn3g17212' => 'nnu', 'Nn3g20776' => 'nnu', 'Nn3g21923' => 'nnu', 'Nn5g27737' => 'nnu', 'Nn5g29461' => 'nnu', 'Nn7g38355' => 'nnu', 'Nn8g39873' => 'nnu', 'Oeu000548.2' => 'oeu', 'Oeu004672.1' => 'oeu', 'Oeu015605.2' => 'oeu', 'Oeu016092.1' => 'oeu', 'Oeu017879.3' => 'oeu', 'Oeu024910.1' => 'oeu', 'Oeu028965.1' => 'oeu', 'Oeu031269.1' => 'oeu', 'Oeu031270.1' => 'oeu', 'Oeu032535.1' => 'oeu', 'Oeu034151.1' => 'oeu', 'Oeu034152.1' => 'oeu', 'Oeu034588.2' => 'oeu', 'Oeu050846.1' => 'oeu', 'Oeu050849.2' => 'oeu', 'Oeu051063.2' => 'oeu', 'Oeu052368.1' => 'oeu', 'Oeu052370.1' => 'oeu', 'Os01g0210400' => 'osa', 'Os01g0304300' => 'osa', 'Os01g0749100' => 'osa', 'Os02g0745800' => 'osa', 'Os03g0769050' => 'osa', 'Os05g0531500' => 'osa', 'Os06g0724300' => 'osa', 'Os11g0198100' => 'osa', 'Peaxi162Scf00069g01425' => 'pax', 'Peaxi162Scf00280g00811' => 'pax', 'Peaxi162Scf00310g00615' => 'pax', 'Peaxi162Scf00362g00542' => 'pax', 'Peaxi162Scf00461g00310' => 'pax', 'Peaxi162Scf00530g00118' => 'pax', 'Peaxi162Scf00541g00057' => 'pax', 'Peaxi162Scf00661g00017' => 'pax', 'Peaxi162Scf00926g00027' => 'pax', 'Peaxi162Scf01064g00263' => 'pax', 'Peaxi162Scf01211g00135' => 'pax', 'PGR004G2336' => 'pgr', 'PGR042G0327' => 'pgr', 'PGR042G1957' => 'pgr', 'PGR042G2003' => 'pgr', 'PGR042G3929' => 'pgr', 'PGR083G1137' => 'pgr', 'PGR083G1364' => 'pgr', 'PGSC0003DMG400003381' => 'stu', 'PGSC0003DMG400003417' => 'stu', 'PGSC0003DMG400008981' => 'stu', 'PGSC0003DMG400012417' => 'stu', 'PGSC0003DMG400012823' => 'stu', 'PGSC0003DMG400016885' => 'stu', 'PGSC0003DMG400022812' => 'stu', 'PGSC0003DMG400029726' => 'stu', 'PGSC0003DMG401009243' => 'stu', 'PGSC0003DMG401031505' => 'stu', 'PGSC0003DMG402031505' => 'stu', 'Phvul.001G017600' => 'pvu', 'Phvul.002G193500' => 'pvu', 'Phvul.002G228900' => 'pvu', 'Phvul.002G236800' => 'pvu', 'Phvul.003G049500' => 'pvu', 'Phvul.005G072000' => 'pvu', 'Phvul.006G164800' => 'pvu', 'Phvul.006G185100' => 'pvu', 'Phvul.007G090000' => 'pvu', 'Potri.001G399800' => 'ptr', 'Potri.002G149900' => 'ptr', 'Potri.004G044100' => 'ptr', 'Potri.004G177600' => 'ptr', 'Potri.009G138000' => 'ptr', 'Potri.010G094000' => 'ptr', 'Potri.011G053000' => 'ptr', 'Potri.011G119300' => 'ptr', 'Potri.013G113700' => 'ptr', 'Potri.018G107800' => 'ptr', 'Potri.019G084100' => 'ptr', 'Pp3c14_23720' => 'ppa', 'Pp3c16_6340' => 'ppa', 'Pp3c23_13420' => 'ppa', 'Pp3c24_2740' => 'ppa', 'Pp3c25_860' => 'ppa', 'Pp3c8_21750' => 'ppa', 'Prupe.1G273000' => 'ppe', 'Prupe.1G273700' => 'ppe', 'Prupe.1G274100' => 'ppe', 'Prupe.2G023300' => 'ppe', 'Prupe.4G048000' => 'ppe', 'Prupe.4G080400' => 'ppe', 'Prupe.4G181200' => 'ppe', 'Prupe.8G056900' => 'ppe', 'Prupe.8G168700' => 'ppe', 'Psat1g189080' => 'psa', 'Psat1g204760' => 'psa', 'Psat4g175560' => 'psa', 'Psat4g177720' => 'psa', 'Psat5g244240' => 'psa', 'Psat6g010720' => 'psa', 'Psat6g187200' => 'psa', 'Psat7g072040' => 'psa', 'PSO017G3501' => 'pso', 'PSO063G2148' => 'pso', 'PSO063G5608' => 'pso', 'PSO210G6392' => 'pso', 'PSO541G2319' => 'pso', 'PSO541G2836' => 'pso', 'PSO541G4012' => 'pso', 'PSO541G6253' => 'pso', 'PSO675G0580' => 'pso', 'PSO675G0856' => 'pso', 'PSO675G5635' => 'pso', 'PSO675G9157' => 'pso', 'PSO832G1660' => 'pso', 'PSO832G1969' => 'pso', 'QL02p007186' => 'qlo', 'QL02p033904' => 'qlo', 'QL03p064391' => 'qlo', 'QL05p040593' => 'qlo', 'QL05p058242' => 'qlo', 'QL08p021825' => 'qlo', 'QL11p004981' => 'qlo', 'RcHm_v2.0_Chr1g0318301' => 'rch', 'RcHm_v2.0_Chr4g0418501' => 'rch', 'RcHm_v2.0_Chr4g0439971' => 'rch', 'RcHm_v2.0_Chr5g0008541' => 'rch', 'RcHm_v2.0_Chr5g0014101' => 'rch', 'RcHm_v2.0_Chr5g0014131' => 'rch', 'RcHm_v2.0_Chr5g0033621' => 'rch', 'RcHm_v2.0_Chr6g0272041' => 'rch', 'RcHm_v2.0_Chr6g0278831' => 'rch', 'Rhsim02G0130400' => 'rsi', 'Rhsim02G0171100' => 'rsi', 'Rhsim05G0053000' => 'rsi', 'Rhsim05G0053100' => 'rsi', 'Rhsim06G0096500' => 'rsi', 'Rhsim06G0096600' => 'rsi', 'Rhsim06G0199100' => 'rsi', 'Rhsim12G0062300' => 'rsi', 'Rhsim12G0062800' => 'rsi', 'Sabra02G0118600' => 'sbr', 'Sabra04G0027300' => 'sbr', 'Sabra04G0119500' => 'sbr', 'Sabra08G0112500' => 'sbr', 'Sabra11G0036800' => 'sbr', 'Sabra11G0103800' => 'sbr', 'Sabra13G0096300' => 'sbr', 'Sabra16G0262300' => 'sbr', 'Sabra18G0091700' => 'sbr', 'Sabra19G0095400' => 'sbr', 'SalBow6G3080' => 'sbo', 'SalBow7G1157' => 'sbo', 'SalBow7G2123' => 'sbo', 'SalBow7G2285' => 'sbo', 'SalBow7G3537' => 'sbo', 'SalBow8G2947' => 'sbo', 'SalBow8G4463' => 'sbo', 'SalBow8G5466' => 'sbo', 'Sc01g0001750' => 'sci', 'Sc02g0006640' => 'sci', 'Sc02g0006670' => 'sci', 'Sc04g0008220' => 'sci', 'Sc05g0006190' => 'sci', 'Sc08g0002760' => 'sci', 'Sc17g0006170' => 'sci', 'Sc22g0002050' => 'sci', 'Sc23g0001190' => 'sci', 'Sc24g0000980' => 'sci', 'Sed0006245' => 'sed', 'Sed0007543' => 'sed', 'Sed0009411' => 'sed', 'Sed0010765' => 'sed', 'Sed0012944' => 'sed', 'Sed0014682' => 'sed', 'Sed0016174' => 'sed', 'Sed0016796' => 'sed', 'Sed0020317' => 'sed', 'Sed0021467' => 'sed', 'SEGI_01316' => 'sgi', 'SEGI_03374' => 'sgi', 'SEGI_16265' => 'sgi', 'SEGI_18569' => 'sgi', 'SEGI_20351' => 'sgi', 'SEGI_26395' => 'sgi', 'SEGI_29469' => 'sgi', 'SEGI_34771' => 'sgi', 'SEGI_36769' => 'sgi', 'SEGI_37139' => 'sgi', 'SGA_v2.0_scaffold100G29687' => 'sas', 'SGA_v2.0_scaffold118G32472' => 'sas', 'SGA_v2.0_scaffold14G07051' => 'sas', 'SGA_v2.0_scaffold183G39845' => 'sas', 'SGA_v2.0_scaffold1G00174' => 'sas', 'SGA_v2.0_scaffold22G09714' => 'sas', 'SGA_v2.0_scaffold333G48992' => 'sas', 'SGA_v2.0_scaffold46G17491' => 'sas', 'SGA_v2.0_scaffold49G18294' => 'sas', 'SGA_v2.0_scaffold63G21658' => 'sas', 'SHI01741' => 'shi', 'SHI05771' => 'shi', 'SHI18077' => 'shi', 'SHI20525' => 'shi', 'SHI20527' => 'shi', 'SHI20528' => 'shi', 'SMO172G0185' => 'smo', 'SMO198G0020' => 'smo', 'SMO351G0006' => 'smo', 'SMO356G0118' => 'smo', 'SMO358G0296' => 'smo', 'SMO367G0079' => 'smo', 'SMO367G1277' => 'smo', 'Solyc01g014220.3' => 'sly', 'Solyc01g111770.2' => 'sly', 'Solyc02g078180.3' => 'sly', 'Solyc03g006430.3' => 'sly', 'Solyc03g006456.1' => 'sly', 'Solyc03g079860.2' => 'sly', 'Solyc04g079770.3' => 'sly', 'Solyc05g007430.4' => 'sly', 'Solyc07g063150.3' => 'sly', 'Solyc08g016620.3' => 'sly', 'Solyc09g057590.3' => 'sly', 'Solyc09g057600.1' => 'sly', 'Solyc10g009050.3' => 'sly', 'Solyc11g017420.2' => 'sly', 'Sopen01g053810' => 'spe', 'Sopen02g023040' => 'spe', 'Sopen03g002440' => 'spe', 'Sopen04g033350' => 'spe', 'Sopen05g003310' => 'spe', 'Sopen07g004050' => 'spe', 'Sopen07g031340' => 'spe', 'Sopen08g006990' => 'spe', 'Sopen10g004830' => 'spe', 'Sopen11g009370' => 'spe', 'Sp1g24450' => 'spa', 'Sp1g29670' => 'spa', 'Sp1g39600' => 'spa', 'Sp2g11080' => 'spa', 'Sp2g13970' => 'spa', 'Sp4g16130' => 'spa', 'Sp6g13080' => 'spa', 'Sp7g37270' => 'spa', 'TAR371G0065' => 'tar', 'TAR376G0340' => 'tar', 'TAR376G0435' => 'tar', 'TAR381G0002' => 'tar', 'TAR381G1236' => 'tar', 'TAR624G0055' => 'tar', 'TAR624G0324' => 'tar', 'TAR624G0696' => 'tar', 'TAR624G0906' => 'tar', 'TAR625G0107' => 'tar', 'TAR626G0015' => 'tar', 'TAR626G1356' => 'tar', 'TAR627G0888' => 'tar', 'TAR628G0399' => 'tar', 'TAR628G1327' => 'tar', 'TAR629G2831' => 'tar', 'TAR629G2874' => 'tar', 'TAR633G1432' => 'tar', 'TAR633G2771' => 'tar', 'THA.LOC104803394' => 'tha', 'THA.LOC104805153' => 'tha', 'THA.LOC104806784' => 'tha', 'THA.LOC104810473' => 'tha', 'THA.LOC104813100' => 'tha', 'THA.LOC104814215' => 'tha', 'THA.LOC104815554' => 'tha', 'THA.LOC104820544' => 'tha', 'THA.LOC104824754' => 'tha', 'THA.LOC104827717' => 'tha', 'Thecc.02G031400' => 'tca', 'Thecc.02G055900' => 'tca', 'Thecc.02G350800' => 'tca', 'Thecc.06G150900' => 'tca', 'Thecc.06G186600' => 'tca', 'Thecc.07G089600' => 'tca', 'Thecc.08G020400' => 'tca', 'Thecc.08G182100' => 'tca', 'Thhalv10000873m.g' => 'esa', 'Thhalv10004185m.g' => 'esa', 'Thhalv10006981m.g' => 'esa', 'Thhalv10007204m.g' => 'esa', 'Thhalv10011374m.g' => 'esa', 'Thhalv10013482m.g' => 'esa', 'Thhalv10017801m.g' => 'esa', 'Thhalv10024983m.g' => 'esa', 'TPR.G12072' => 'tpr', 'TPR.G15769' => 'tpr', 'TPR.G16504' => 'tpr', 'TPR.G16506' => 'tpr', 'TPR.G24345' => 'tpr', 'TPR.G26666' => 'tpr', 'TPR.G27320' => 'tpr', 'TPR.G31819' => 'tpr', 'TPR.G38879' => 'tpr', 'TPR.G39015' => 'tpr', 'TPR.G8819' => 'tpr', 'TWI09G0924' => 'twi', 'TWI12G0811' => 'twi', 'TWI12G1294' => 'twi', 'TWI31G0150' => 'twi', 'TWI36G1262' => 'twi', 'TWI38G1287' => 'twi', 'TWI38G1633' => 'twi', 'TWI38G1982' => 'twi', 'TWI39G0116' => 'twi', 'TWI60G1011' => 'twi', 'TWI63G0171' => 'twi', 'TWI73G0839' => 'twi', 'TWI79G1511' => 'twi', 'unitig_0.g915' => 'ugi', 'unitig_0.g916' => 'ugi', 'unitig_21.g20219' => 'ugi', 'unitig_21.g20416' => 'ugi', 'unitig_578.g16132' => 'ugi', 'unitig_578.g16718' => 'ugi', 'unitig_62.g23481' => 'ugi', 'unitig_744.g24535' => 'ugi', 'unitig_749.g13525' => 'ugi', 'vmacro01248' => 'vma', 'vmacro02290' => 'vma', 'vmacro10946' => 'vma', 'vmacro11865' => 'vma', 'vmacro12493' => 'vma', 'vmacro17322' => 'vma', 'vmacro21599' => 'vma', 'vmacro23041' => 'vma', 'VMungo0251G0004' => 'vmu', 'VMungo0251G2639' => 'vmu', 'VMungo0251G2967' => 'vmu', 'VMungo0540G0864' => 'vmu', 'VMungo0540G1569' => 'vmu', 'VMungo0647G0317' => 'vmu', 'VMungo0720G1373' => 'vmu', 'VMungo0720G1508' => 'vmu', 'VMungo1080G0485' => 'vmu', 'VMungo1215G3177' => 'vmu', 'Zm00001eb112600' => 'zma', 'Zm00001eb120220' => 'zma', 'Zm00001eb153240' => 'zma', 'Zm00001eb168880' => 'zma', 'Zm00001eb213920' => 'zma', 'Zm00001eb228280' => 'zma', 'Zm00001eb254580' => 'zma', 'Zm00001eb272180' => 'zma', 'Zm00001eb293190' => 'zma', 'Zm00001eb322930' => 'zma', 'Zm00001eb353360' => 'zma', 'Zm00001eb353390' => 'zma', 'Zm00001eb353430' => 'zma', 'Zm00001eb353440' => 'zma', 'Zm00001eb353780' => 'zma' ) $gf_id = 'HOM05D000499' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000499' ) $data_identifier = 'HOM05D000499' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 29, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 12, 'amhyb' => (int) 8, 'aly' => (int) 12, 'aox' => (int) 9, 'arhy' => (int) 26, 'ath' => (int) 8, 'atr' => (int) 7, 'acertr' => (int) 10, 'cqu' => (int) 15, 'bca' => (int) 29, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 11, 'cansat' => (int) 8, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 9, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 8, 'cpa' => (int) 10, 'csa' => (int) 7, 'camsi' => (int) 20, 'dca' => (int) 8, 'din' => (int) 12, 'dzi' => (int) 14, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 6, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 38, 'gra' => (int) 16, 'vvi' => (int) 8, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 5, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 11, 'lja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 11, 'mpo' => (int) 3, 'mbi' => (int) 14, 'mdo' => (int) 14, 'mtr' => (int) 8, 'cme' => (int) 9, 'egut' => (int) 9, 'ama' => (int) 11, 'nta' => (int) 17, 'nnu' => (int) 11, 'oeu' => (int) 18, 'osa' => (int) 8, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 6, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 9, 'rsi' => (int) 9, 'sbr' => (int) 10, 'sbo' => (int) 8, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 10, 'sas' => (int) 10, 'shi' => (int) 6, 'smo' => (int) 7, 'sly' => (int) 14, 'spe' => (int) 10, 'spa' => (int) 8, 'tar' => (int) 19, 'tha' => (int) 10, 'tca' => (int) 8, 'esa' => (int) 8, 'tpr' => (int) 11, 'twi' => (int) 13, 'ugi' => (int) 9, 'vma' => (int) 8, 'vmu' => (int) 10, 'zma' => (int) 15 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb353780' $species_info = array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ) $local_species = 'eca' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000499', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1066', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p29780' => 'bna', 'A02p33180' => 'bna', 'A03p16470' => 'bna', 'A03p66010' => 'bna', 'A04p25970' => 'bna', 'A06p01270' => 'bna', 'A06p46080' => 'bna', 'A07p11400' => 'bna', 'A08p01840' => 'bna', 'A08p08230' => 'bna', 'A08p25740' => 'bna', 'A09p32070' => 'bna', 'A09p37830' => 'bna', 'A09p42840' => 'bna', 'A09p42850' => 'bna', 'Aa31LG10G2060' => 'aar', 'Aa31LG2G7410' => 'aar', 'Aa31LG6G10200' => 'aar', 'Aa31LG6G16680' => 'aar', 'Aa31LG6G8470' => 'aar', 'Aa31LG9G12730' => 'aar', 'Aa31LG9G13680' => 'aar', 'Aa31LG9G14920' => 'aar', 'Aa31LG9G6650' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4977' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5467' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3254' => 'aag', 'Actinidia02578' => 'ach', 'Actinidia07693' => 'ach', 'Actinidia08413' => 'ach', 'Actinidia08414' => 'ach', 'Actinidia15289' => 'ach', 'Actinidia19871' => 'ach', 'Actinidia21475' => 'ach', 'Actinidia22576' => 'ach', 'Actinidia28327' => 'ach', 'Actinidia32491' => 'ach', 'Actinidia39463' => 'ach', 'Actinidia39571' => 'ach', 'Ah.01g013750' => 'amhyb', 'Ah.01g023210' => 'amhyb', 'Ah.04g164850' => 'amhyb', 'Ah.05g178060' => 'amhyb', 'Ah.07g204270' => 'amhyb', 'Ah.07g208480' => 'amhyb', 'Ah.09g237410' => 'amhyb', 'Ah.14g089460' => 'amhyb', 'AL1G41790' => 'aly', 'AL1G49050' => 'aly', 'AL1G53810' => 'aly', 'AL1G61400' => 'aly', 'AL4G18580' => 'aly', 'AL5G12510' => 'aly', 'AL5G12540' => 'aly', 'AL6G43230' => 'aly', 'AL7G10370' => 'aly', 'AL7G19250' => 'aly', 'AL8G12240' => 'aly', 'AL8G18540' => 'aly', 'Aqoxy1G02409' => 'aox', 'Aqoxy2G03993' => 'aox', 'Aqoxy3G03357' => 'aox', 'Aqoxy4G00785' => 'aox', 'Aqoxy5G02598' => 'aox', 'Aqoxy6G00132' => 'aox', 'Aqoxy7G01776' => 'aox', 'Aqoxy7G02316' => 'aox', 'Aqoxy7G03973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.12AFKW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B8730' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27IQR1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3F75VG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3RE0GA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41TCQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.527VTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FIR39' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5W8UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DA38EV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ63HS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H1I32C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HC27T5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4M8AP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7N3CZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9UVDZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LS1NQA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT1D4B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SKC4TM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCFV76' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF9Q1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQWD9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1ZM88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WE07RT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YCK7VH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJE6Q6' => 'arhy', 'AT1G28240' => 'ath', 'AT1G34550' => 'ath', 'AT1G53040' => 'ath', 'AT2G02910' => 'ath', 'AT4G09630' => 'ath', 'AT4G38500' => 'ath', 'AT5G42660' => 'ath', 'AT5G46220' => 'ath', 'ATR0152G026' => 'atr', 'ATR0564G343' => 'atr', 'ATR0706G151' => 'atr', 'ATR0733G207' => 'atr', 'ATR0751G234' => 'atr', 'ATR0807G048' => 'atr', 'ATR1091G084' => 'atr', 'Atru.chr10.1229' => 'acertr', 'Atru.chr10.1230' => 'acertr', 'Atru.chr10.1874' => 'acertr', 'Atru.chr11.1808' => 'acertr', 'Atru.chr13.1795' => 'acertr', 'Atru.chr13.570' => 'acertr', 'Atru.chr2.2608' => 'acertr', 'Atru.chr2.2609' => 'acertr', 'Atru.chr5.3428' => 'acertr', 'Atru.chr8.1171' => 'acertr', 'AUR62004651' => 'cqu', 'AUR62008675' => 'cqu', 'AUR62010014' => 'cqu', 'AUR62013004' => 'cqu', 'AUR62014825' => 'cqu', 'AUR62015015' => 'cqu', 'AUR62015151' => 'cqu', 'AUR62017020' => 'cqu', 'AUR62019422' => 'cqu', 'AUR62023570' => 'cqu', 'AUR62025571' => 'cqu', 'AUR62029098' => 'cqu', 'AUR62033863' => 'cqu', 'AUR62034296' => 'cqu', 'AUR62040075' => 'cqu', 'BcaB02g07334' => 'bca', 'BcaB02g10575' => 'bca', 'BcaB03g12119' => 'bca', 'BcaB03g12120' => 'bca', 'BcaB03g13945' => 'bca', 'BcaB04g17123' => 'bca', 'BcaB04g17867' => 'bca', 'BcaB04g19839' => 'bca', 'BcaB07g30317' => 'bca', 'BcaB07g32432' => 'bca', 'BcaB07g33362' => 'bca', 'BcaB08g36611' => 'bca', 'BcaC01g00028' => 'bca', 'BcaC01g01356' => 'bca', 'BcaC01g02034' => 'bca', 'BcaC01g06051' => 'bca', 'BcaC03g16839' => 'bca', 'BcaC03g17176' => 'bca', 'BcaC05g26829' => 'bca', 'BcaC06g31490' => 'bca', 'BcaC06g35344' => 'bca', 'BcaC06g36570' => 'bca', 'BcaC07g37537' => 'bca', 'BcaC08g43491' => 'bca', 'BcaC08g43773' => 'bca', 'BcaNung00234' => 'bca', 'BcaNung01982' => 'bca', 'BcaNung03707' => 'bca', 'BcaNung06454' => 'bca', 'BolC2t10762H' => 'bol', 'BolC2t11191H' => 'bol', 'BolC3t14322H' => 'bol', 'BolC3t19747H' => 'bol', 'BolC3t21425H' => 'bol', 'BolC4t27800H' => 'bol', 'BolC5t31423H' => 'bol', 'BolC6t35951H' => 'bol', 'BolC6t36282H' => 'bol', 'BolC7t40678H' => 'bol', 'BolC7t40679H' => 'bol', 'BolC7t42222H' => 'bol', 'BolC7t43492H' => 'bol', 'BolC7t46785H' => 'bol', 'BolC8t47853H' => 'bol', 'BolC9t56805H' => 'bol', 'BraA02t08000Z' => 'bra', 'BraA02t08341Z' => 'bra', 'BraA03t10936Z' => 'bra', 'BraA03t15657Z' => 'bra', 'BraA04t18100Z' => 'bra', 'BraA05t20523Z' => 'bra', 'BraA06t23353Z' => 'bra', 'BraA06t27473Z' => 'bra', 'BraA06t27769Z' => 'bra', 'BraA07t28928Z' => 'bra', 'BraA08t32236Z' => 'bra', 'BraA08t32841Z' => 'bra', 'BraA08t34524Z' => 'bra', 'BraA09t38742Z' => 'bra', 'BraA09t39295Z' => 'bra', 'C02p47180' => 'bna', 'C02p50990' => 'bna', 'C03p19360' => 'bna', 'C03p74950' => 'bna', 'C03p91000' => 'bna', 'C04p63260' => 'bna', 'C05p27050' => 'bna', 'C06p08750' => 'bna', 'C06p11490' => 'bna', 'C07p02820' => 'bna', 'C07p17180' => 'bna', 'C07p29440' => 'bna', 'C07p63730' => 'bna', 'C09p39260' => 'bna', 'CAN.G1164.34' => 'can', 'CAN.G1164.39' => 'can', 'CAN.G1530.3' => 'can', 'CAN.G162.61' => 'can', 'CAN.G176.6' => 'can', 'CAN.G289.49' => 'can', 'CAN.G370.21' => 'can', 'CAN.G370.22' => 'can', 'CAN.G371.117' => 'can', 'CAN.G58.37' => 'can', 'CAN.G588.98' => 'can', 'CANSAT21G2266' => 'cansat', 'CANSAT25G2799' => 'cansat', 'CANSAT35G0862' => 'cansat', 'CANSAT35G1704' => 'cansat', 'CANSAT35G1760' => 'cansat', 'CANSAT56G3971' => 'cansat', 'CANSAT56G4116' => 'cansat', 'CANSAT80G1259' => 'cansat', 'CARHR027730' => 'chi', 'CARHR033880' => 'chi', 'CARHR043270' => 'chi', 'CARHR145330' => 'chi', 'CARHR145340' => 'chi', 'CARHR175570' => 'chi', 'CARHR181570' => 'chi', 'CARHR258470' => 'chi', 'CARHR260490' => 'chi', 'CARHR294220' => 'chi', 'Carub.0001s2668' => 'cru', 'Carub.0001s3257' => 'cru', 'Carub.0001s4220' => 'cru', 'Carub.0005s0179' => 'cru', 'Carub.0006s2807' => 'cru', 'Carub.0007s0039' => 'cru', 'Carub.0008s0169' => 'cru', 'Carub.0008s0636' => 'cru', 'Ca_00338_v3' => 'car', 'Ca_00542_v3' => 'car', 'Ca_01844_v3' => 'car', 'Ca_10611_v3' => 'car', 'Ca_13326_v3' => 'car', 'Ca_17944_v3' => 'car', 'Ca_18546_v3' => 'car', 'Ca_24219_v3' => 'car', 'Ca_29972_v3' => 'car', 'CBR_g3681' => 'cbr', 'CBR_g40021' => 'cbr', 'Cc01_g08140' => 'ccan', 'Cc02_g13410' => 'ccan', 'Cc02_g37480' => 'ccan', 'Cc05_g12030' => 'ccan', 'Cc09_g03370' => 'ccan', 'Cc09_g10300' => 'ccan', 'Cc10_g03530' => 'ccan', 'Cc10_g11380' => 'ccan', 'CDE01G0176' => 'cde', 'CDE02G0675' => 'cde', 'CDE02G0942' => 'cde', 'CDE02G1153' => 'cde', 'CDE02G4177' => 'cde', 'CDE04G2117' => 'cde', 'CDE04G2736' => 'cde', 'CDE08G1161' => 'cde', 'CDE09G1238' => 'cde', 'Cfa000467' => 'cfa', 'Cfa000947' => 'cfa', 'Cfa004969' => 'cfa', 'Cfa005284' => 'cfa', 'Cfa008993' => 'cfa', 'Cfa018187' => 'cfa', 'Cfa018454' => 'cfa', 'Cfa020585' => 'cfa', 'Ciclev10000424m.g' => 'ccl', 'Ciclev10003605m.g' => 'ccl', 'Ciclev10007828m.g' => 'ccl', 'Ciclev10014620m.g' => 'ccl', 'Ciclev10015169m.g' => 'ccl', 'Ciclev10018291m.g' => 'ccl', 'Ciclev10028256m.g' => 'ccl', 'Ciclev10033822m.g' => 'ccl', 'CiPaw.05G060300' => 'cil', 'CiPaw.05G085000' => 'cil', 'CiPaw.06G083700' => 'cil', 'CiPaw.06G120300' => 'cil', 'CiPaw.09G060500' => 'cil', 'CiPaw.09G123800' => 'cil', 'CiPaw.11G169700' => 'cil', 'CiPaw.12G118300' => 'cil', 'CiPaw.15G071000' => 'cil', 'CiPaw.15G081900' => 'cil', 'ClCG01G024610' => 'cla', 'ClCG03G006070' => 'cla', 'ClCG05G019250' => 'cla', 'ClCG09G009500' => 'cla', 'ClCG11G008200' => 'cla', 'ClCG11G018080' => 'cla', 'COL.COLO4_17373' => 'col', 'COL.COLO4_22994' => 'col', 'COL.COLO4_26389' => 'col', 'COL.COLO4_27170' => 'col', 'COL.COLO4_31074' => 'col', 'COL.COLO4_31465' => 'col', 'COL.COLO4_36438' => 'col', 'COL.COLO4_36439' => 'col', 'Cpa.g.c38781' => 'cpa', 'Cpa.g.sc128.12' => 'cpa', 'Cpa.g.sc166.7' => 'cpa', 'Cpa.g.sc166.8' => 'cpa', 'Cpa.g.sc20.111' => 'cpa', 'Cpa.g.sc27.31' => 'cpa', 'Cpa.g.sc64.36' => 'cpa', 'Cpa.g.sc64.37' => 'cpa', 'Cpa.g.sc66.49' => 'cpa', 'Cpa.g.sc80.64' => 'cpa', 'CsaV3_1G012320' => 'csa', 'CsaV3_2G008480' => 'csa', 'CsaV3_2G033450' => 'csa', 'CsaV3_3G044830' => 'csa', 'CsaV3_4G033710' => 'csa', 'CsaV3_6G051730' => 'csa', 'CsaV3_7G025350' => 'csa', 'CSS0001067' => 'camsi', 'CSS0005996' => 'camsi', 'CSS0006590' => 'camsi', 'CSS0009673' => 'camsi', 'CSS0010201' => 'camsi', 'CSS0010549' => 'camsi', 'CSS0011364' => 'camsi', 'CSS0014473' => 'camsi', 'CSS0014961' => 'camsi', 'CSS0020191' => 'camsi', 'CSS0021165' => 'camsi', 'CSS0022306' => 'camsi', 'CSS0030591' => 'camsi', 'CSS0030696' => 'camsi', 'CSS0032653' => 'camsi', 'CSS0037487' => 'camsi', 'CSS0041102' => 'camsi', 'CSS0041261' => 'camsi', 'CSS0046246' => 'camsi', 'CSS0049256' => 'camsi', 'DCAR_004075' => 'dca', 'DCAR_011538' => 'dca', 'DCAR_019553' => 'dca', 'DCAR_020952' => 'dca', 'DCAR_021739' => 'dca', 'DCAR_027407' => 'dca', 'DCAR_027913' => 'dca', 'DCAR_028066' => 'dca', 'Dinv05899' => 'din', 'Dinv07563' => 'din', 'Dinv08010' => 'din', 'Dinv14125' => 'din', 'Dinv20172' => 'din', 'Dinv30743' => 'din', 'Dinv31229' => 'din', 'Dinv34162' => 'din', 'Dinv36028' => 'din', 'Dinv39368' => 'din', 'Dinv40565' => 'din', 'Dinv41706' => 'din', 'Duzib052G0089' => 'dzi', 'Duzib116G0641' => 'dzi', 'Duzib132G0069' => 'dzi', 'Duzib132G1219' => 'dzi', 'Duzib147G0278' => 'dzi', 'Duzib160G0480' => 'dzi', 'Duzib170G0661' => 'dzi', 'Duzib177G0591' => 'dzi', 'Duzib187G1353' => 'dzi', 'Duzib192G0858' => 'dzi', 'Duzib192G0883' => 'dzi', 'Duzib213G0506' => 'dzi', 'Duzib235G0289' => 'dzi', 'Duzib251G0422' => 'dzi', 'ECA232G3898' => 'eca', 'ECA233G5950' => 'eca', 'ECA234G1699' => 'eca', 'ECA234G2421' => 'eca', 'ECA236G0426' => 'eca', 'ECA236G4331' => 'eca', 'ECA248G2573' => 'eca', 'EL10Ac1g00077' => 'bvu', 'EL10Ac1g01746' => 'bvu', 'EL10Ac2g03464' => 'bvu', 'EL10Ac4g08176' => 'bvu', 'EL10Ac7g17521' => 'bvu', 'EL10Ac8g20386' => 'bvu', 'EL10Ac9g21343' => 'bvu', 'EL10Ac9g22688' => 'bvu', 'Eucgr.B03434' => 'egr', 'Eucgr.D00618' => 'egr', 'Eucgr.E02395' => 'egr', 'Eucgr.F01129' => 'egr', 'Eucgr.F02622' => 'egr', 'Eucgr.F04207' => 'egr', 'FAN01G0570' => 'fan', 'FAN03G3351' => 'fan', 'FAN06G3702' => 'fan', 'FAN07G2149' => 'fan', 'FAN10G3758' => 'fan', 'FAN11G1170' => 'fan', 'FAN11G2050' => 'fan', 'FAN11G2724' => 'fan', 'FAN12G1700' => 'fan', 'FAN12G2028' => 'fan', 'FAN15G1160' => 'fan', 'FAN15G3063' => 'fan', 'FAN16G2540' => 'fan', 'FAN16G3077' => 'fan', 'FAN16G3624' => 'fan', 'FAN17G0221' => 'fan', 'FAN20G2492' => 'fan', 'FAN20G2905' => 'fan', 'FAN21G0548' => 'fan', 'FAN21G1300' => 'fan', 'FAN22G0077' => 'fan', 'FAN22G1315' => 'fan', 'FAN24G1280' => 'fan', 'FAN24G1445' => 'fan', 'FAN24G3527' => 'fan', 'FAN25G0464' => 'fan', 'FAN25G2885' => 'fan', 'FAN25G3270' => 'fan', 'FAN27G1101' => 'fan', 'FAN27G2846' => 'fan', 'FAN27G3524' => 'fan', 'FvH4_2g11770' => 'fve', 'FvH4_2g15630' => 'fve', 'FvH4_3g05570' => 'fve', 'FvH4_3g09110' => 'fve', 'FvH4_3g19940' => 'fve', 'FvH4_4g04821' => 'fve', 'FvH4_4g31480' => 'fve', 'FvH4_7g01740' => 'fve', 'Glyma.05G130400' => 'gma', 'Glyma.05G156400' => 'gma', 'Glyma.07G197000' => 'gma', 'Glyma.08G085151' => 'gma', 'Glyma.08G114500' => 'gma', 'Glyma.08G300400' => 'gma', 'Glyma.10G215800' => 'gma', 'Glyma.12G224400' => 'gma', 'Glyma.13G179300' => 'gma', 'Glyma.13G218151' => 'gma', 'Glyma.13G238800' => 'gma', 'Glyma.13G276900' => 'gma', 'Glyma.14G078200' => 'gma', 'Glyma.15G074500' => 'gma', 'Glyma.15G094100' => 'gma', 'Glyma.17G247200' => 'gma', 'Glyma.18G120100' => 'gma', 'Glyma.20G176000' => 'gma', 'Gohir.A01G063600' => 'ghi', 'Gohir.A01G170301' => 'ghi', 'Gohir.A02G060500' => 'ghi', 'Gohir.A05G133850' => 'ghi', 'Gohir.A05G161400' => 'ghi', 'Gohir.A06G012900' => 'ghi', 'Gohir.A06G035901' => 'ghi', 'Gohir.A06G127100' => 'ghi', 'Gohir.A06G210500' => 'ghi', 'Gohir.A08G008650' => 'ghi', 'Gohir.A09G072700' => 'ghi', 'Gohir.A09G088301' => 'ghi', 'Gohir.A10G040600' => 'ghi', 'Gohir.A12G036300' => 'ghi', 'Gohir.A12G143350' => 'ghi', 'Gohir.A12G165500' => 'ghi', 'Gohir.A13G145700' => 'ghi', 'Gohir.D01G050000' => 'ghi', 'Gohir.D01G051366' => 'ghi', 'Gohir.D01G161350' => 'ghi', 'Gohir.D02G065900' => 'ghi', 'Gohir.D05G164200' => 'ghi', 'Gohir.D05G355500' => 'ghi', 'Gohir.D06G010400' => 'ghi', 'Gohir.D06G111250' => 'ghi', 'Gohir.D06G132000' => 'ghi', 'Gohir.D06G210500' => 'ghi', 'Gohir.D07G165675' => 'ghi', 'Gohir.D08G062240' => 'ghi', 'Gohir.D08G086101' => 'ghi', 'Gohir.D08G138060' => 'ghi', 'Gohir.D09G072300' => 'ghi', 'Gohir.D10G041400' => 'ghi', 'Gohir.D11G191020' => 'ghi', 'Gohir.D11G212066' => 'ghi', 'Gohir.D12G036300' => 'ghi', 'Gohir.D12G168600' => 'ghi', 'Gohir.D13G150600' => 'ghi', 'Gorai.001G057300' => 'gra', 'Gorai.002G069900' => 'gra', 'Gorai.002G200000' => 'gra', 'Gorai.003G067600' => 'gra', 'Gorai.005G074800' => 'gra', 'Gorai.006G087300' => 'gra', 'Gorai.008G037500' => 'gra', 'Gorai.008G181400' => 'gra', 'Gorai.009G169400' => 'gra', 'Gorai.009G387900' => 'gra', 'Gorai.010G013300' => 'gra', 'Gorai.010G153800' => 'gra', 'Gorai.010G255800' => 'gra', 'Gorai.011G043700' => 'gra', 'Gorai.011G198900' => 'gra', 'Gorai.013G168400' => 'gra', 'GSVIVG01005212001' => 'vvi', 'GSVIVG01006163001' => 'vvi', 'GSVIVG01009625001' => 'vvi', 'GSVIVG01014338001' => 'vvi', 'GSVIVG01020005001' => 'vvi', 'GSVIVG01021450001' => 'vvi', 'GSVIVG01023975001' => 'vvi', 'GSVIVG01034490001' => 'vvi', 'HanXRQChr04g0112071' => 'han', 'HanXRQChr05g0131151' => 'han', 'HanXRQChr09g0262371' => 'han', 'HanXRQChr09g0268401' => 'han', 'HanXRQChr10g0279241' => 'han', 'HanXRQChr10g0297961' => 'han', 'HanXRQChr11g0326231' => 'han', 'HanXRQChr11g0328471' => 'han', 'HanXRQChr16g0507941' => 'han', 'HanXRQChr17g0560211' => 'han', 'Haze_02108' => 'cav', 'Haze_02428' => 'cav', 'Haze_05593' => 'cav', 'Haze_06448' => 'cav', 'Haze_09427' => 'cav', 'Haze_12022' => 'cav', 'Haze_17612' => 'cav', 'Haze_17928' => 'cav', 'Hma1.2p1_0032F.1_g019250' => 'hma', 'Hma1.2p1_0163F.1_g072690' => 'hma', 'Hma1.2p1_0265F.1_g106710' => 'hma', 'Hma1.2p1_0286F.1_g113970' => 'hma', 'Hma1.2p1_0363F.1_g136640' => 'hma', 'Hma1.2p1_0584F.1_g183470' => 'hma', 'Hma1.2p1_0885F.1_g232570' => 'hma', 'HPP92_006022' => 'vpl', 'HPP92_007320' => 'vpl', 'HPP92_011521' => 'vpl', 'HPP92_019387' => 'vpl', 'HPP92_024038' => 'vpl', 'Hund05891' => 'sun', 'Hund06450' => 'sun', 'Hund12053' => 'sun', 'Hund16800' => 'sun', 'Hund21222' => 'sun', 'Hund22896' => 'sun', 'Hund23746' => 'sun', 'Hund27083' => 'sun', 'Lalb_Chr02g0141831' => 'lal', 'Lalb_Chr02g0141841' => 'lal', 'Lalb_Chr05g0220411' => 'lal', 'Lalb_Chr06g0162081' => 'lal', 'Lalb_Chr09g0327651' => 'lal', 'Lalb_Chr13g0295051' => 'lal', 'Lalb_Chr15g0086801' => 'lal', 'Lalb_Chr16g0383781' => 'lal', 'Lalb_Chr16g0383791' => 'lal', 'Lalb_Chr18g0055441' => 'lal', 'Lalb_Chr18g0059611' => 'lal', 'Lalb_Chr20g0109661' => 'lal', 'Lalb_Chr20g0109831' => 'lal', 'Lalb_Chr20g0121871' => 'lal', 'Lalb_Chr22g0355361' => 'lal', 'Lalb_Chr25g0286371' => 'lal', 'Lj1A1187G43' => 'lonja', 'Lj1A1205T50' => 'lonja', 'Lj1A800G33' => 'lonja', 'Lj1C1187T7' => 'lonja', 'Lj1C843T11' => 'lonja', 'Lj1g0010940' => 'lja', 'Lj2A288T69' => 'lonja', 'Lj3g0024276' => 'lja', 'Lj4A47T76' => 'lonja', 'Lj4g0005805' => 'lja', 'Lj4g0006097' => 'lja', 'Lj4g0008528' => 'lja', 'Lj4g0024907' => 'lja', 'Lj5g0012472' => 'lja', 'Lj5g0018648' => 'lja', 'Lj6C789G1' => 'lonja', 'Lj6g0004000' => 'lja', 'Lj7A292G67' => 'lonja', 'Lj7A292T64' => 'lonja', 'Lj9A400T58' => 'lonja', 'Lsat_1_v5_gn_1_126181' => 'lsa', 'Lsat_1_v5_gn_4_123041' => 'lsa', 'Lsat_1_v5_gn_4_133620' => 'lsa', 'Lsat_1_v5_gn_4_53221' => 'lsa', 'Lsat_1_v5_gn_4_71961' => 'lsa', 'Lsat_1_v5_gn_7_105241' => 'lsa', 'Lsat_1_v5_gn_7_21361' => 'lsa', 'Lsat_1_v5_gn_7_28860' => 'lsa', 'Lsat_1_v5_gn_7_31260' => 'lsa', 'Lsat_1_v5_gn_8_52801' => 'lsa', 'Manes.02G191400' => 'mes', 'Manes.03G110100' => 'mes', 'Manes.04G071100' => 'mes', 'Manes.05G100500' => 'mes', 'Manes.05G164700' => 'mes', 'Manes.15G087000' => 'mes', 'Manes.15G121500' => 'mes', 'Manes.16G028300' => 'mes', 'Manes.17G046100' => 'mes', 'Manes.17G069800' => 'mes', 'Manes.18G100500' => 'mes', 'Mapoly0002s0109' => 'mpo', 'Mapoly0024s0007' => 'mpo', 'Mapoly0089s0032' => 'mpo', 'MBI04_g42241_MAGBIO' => 'mbi', 'MBI05_g11988_MAGBIO' => 'mbi', 'MBI05_g35452_MAGBIO' => 'mbi', 'MBI07_g30179_MAGBIO' => 'mbi', 'MBI07_g35859_MAGBIO' => 'mbi', 'MBI07_g35860_MAGBIO' => 'mbi', 'MBI07_g37166_MAGBIO' => 'mbi', 'MBI08_g18172_MAGBIO' => 'mbi', 'MBI09_g08441_MAGBIO' => 'mbi', 'MBI13_g01676_MAGBIO' => 'mbi', 'MBI14_g42955_MAGBIO' => 'mbi', 'MBI16_g13161_MAGBIO' => 'mbi', 'MBI17_g27204_MAGBIO' => 'mbi', 'MBI19_g21595_MAGBIO' => 'mbi', 'MD00G1148400' => 'mdo', 'MD02G1301200' => 'mdo', 'MD03G1227800' => 'mdo', 'MD05G1041100' => 'mdo', 'MD05G1124800' => 'mdo', 'MD05G1284000' => 'mdo', 'MD05G1338800' => 'mdo', 'MD05G1338900' => 'mdo', 'MD07G1022800' => 'mdo', 'MD10G1047500' => 'mdo', 'MD10G1127500' => 'mdo', 'MD10G1262300' => 'mdo', 'MD10G1293800' => 'mdo', 'MD16G1074300' => 'mdo', 'Medtr1g021670' => 'mtr', 'Medtr1g096320' => 'mtr', 'Medtr2g013690' => 'mtr', 'Medtr2g019450' => 'mtr', 'Medtr2g085170' => 'mtr', 'Medtr4g088785' => 'mtr', 'Medtr8g055930' => 'mtr', 'Medtr8g085850' => 'mtr', 'MELO3C002605.2' => 'cme', 'MELO3C003891.2' => 'cme', 'MELO3C004012.2' => 'cme', 'MELO3C007134.2' => 'cme', 'MELO3C008118.2' => 'cme', 'MELO3C016700.2' => 'cme', 'MELO3C024127.2' => 'cme', 'MELO3C033361.2' => 'cme', 'MELO3C033362.2' => 'cme', 'Migut.C00430' => 'egut', 'Migut.C01246' => 'egut', 'Migut.E00101' => 'egut', 'Migut.H01486' => 'egut', 'Migut.H01939' => 'egut', 'Migut.K00360' => 'egut', 'Migut.M00910' => 'egut', 'Migut.M01139' => 'egut', 'Migut.N02677' => 'egut', 'MSTRG.13252' => 'ama', 'MSTRG.14701' => 'ama', 'MSTRG.1521' => 'ama', 'MSTRG.15884' => 'ama', 'MSTRG.16242' => 'ama', 'MSTRG.22285' => 'ama', 'MSTRG.22444' => 'ama', 'MSTRG.2349' => 'ama', 'MSTRG.26308' => 'ama', 'MSTRG.28296' => 'ama', 'MSTRG.9895' => 'ama', 'Nitab4.5_0000110g0060' => 'nta', 'Nitab4.5_0000420g0130' => 'nta', 'Nitab4.5_0000422g0030' => 'nta', 'Nitab4.5_0000560g0180' => 'nta', 'Nitab4.5_0000703g0100' => 'nta', 'Nitab4.5_0000786g0200' => 'nta', 'Nitab4.5_0001336g0020' => 'nta', 'Nitab4.5_0001796g0030' => 'nta', 'Nitab4.5_0003348g0060' => 'nta', 'Nitab4.5_0003698g0040' => 'nta', 'Nitab4.5_0003942g0090' => 'nta', 'Nitab4.5_0004775g0070' => 'nta', 'Nitab4.5_0004864g0030' => 'nta', 'Nitab4.5_0005615g0020' => 'nta', 'Nitab4.5_0009288g0030' => 'nta', 'Nitab4.5_0009341g0010' => 'nta', 'Nitab4.5_0009535g0010' => 'nta', 'Nn1g03995' => 'nnu', 'Nn1g04100' => 'nnu', 'Nn1g06530' => 'nnu', 'Nn3g16404' => 'nnu', 'Nn3g17212' => 'nnu', 'Nn3g20776' => 'nnu', 'Nn3g21923' => 'nnu', 'Nn5g27737' => 'nnu', 'Nn5g29461' => 'nnu', 'Nn7g38355' => 'nnu', 'Nn8g39873' => 'nnu', 'Oeu000548.2' => 'oeu', 'Oeu004672.1' => 'oeu', 'Oeu015605.2' => 'oeu', 'Oeu016092.1' => 'oeu', 'Oeu017879.3' => 'oeu', 'Oeu024910.1' => 'oeu', 'Oeu028965.1' => 'oeu', 'Oeu031269.1' => 'oeu', 'Oeu031270.1' => 'oeu', 'Oeu032535.1' => 'oeu', 'Oeu034151.1' => 'oeu', 'Oeu034152.1' => 'oeu', 'Oeu034588.2' => 'oeu', 'Oeu050846.1' => 'oeu', 'Oeu050849.2' => 'oeu', 'Oeu051063.2' => 'oeu', 'Oeu052368.1' => 'oeu', 'Oeu052370.1' => 'oeu', 'Os01g0210400' => 'osa', 'Os01g0304300' => 'osa', 'Os01g0749100' => 'osa', 'Os02g0745800' => 'osa', 'Os03g0769050' => 'osa', 'Os05g0531500' => 'osa', 'Os06g0724300' => 'osa', 'Os11g0198100' => 'osa', 'Peaxi162Scf00069g01425' => 'pax', 'Peaxi162Scf00280g00811' => 'pax', 'Peaxi162Scf00310g00615' => 'pax', 'Peaxi162Scf00362g00542' => 'pax', 'Peaxi162Scf00461g00310' => 'pax', 'Peaxi162Scf00530g00118' => 'pax', 'Peaxi162Scf00541g00057' => 'pax', 'Peaxi162Scf00661g00017' => 'pax', 'Peaxi162Scf00926g00027' => 'pax', 'Peaxi162Scf01064g00263' => 'pax', 'Peaxi162Scf01211g00135' => 'pax', 'PGR004G2336' => 'pgr', 'PGR042G0327' => 'pgr', 'PGR042G1957' => 'pgr', 'PGR042G2003' => 'pgr', 'PGR042G3929' => 'pgr', 'PGR083G1137' => 'pgr', 'PGR083G1364' => 'pgr', 'PGSC0003DMG400003381' => 'stu', 'PGSC0003DMG400003417' => 'stu', 'PGSC0003DMG400008981' => 'stu', 'PGSC0003DMG400012417' => 'stu', 'PGSC0003DMG400012823' => 'stu', 'PGSC0003DMG400016885' => 'stu', 'PGSC0003DMG400022812' => 'stu', 'PGSC0003DMG400029726' => 'stu', 'PGSC0003DMG401009243' => 'stu', 'PGSC0003DMG401031505' => 'stu', 'PGSC0003DMG402031505' => 'stu', 'Phvul.001G017600' => 'pvu', 'Phvul.002G193500' => 'pvu', 'Phvul.002G228900' => 'pvu', 'Phvul.002G236800' => 'pvu', 'Phvul.003G049500' => 'pvu', 'Phvul.005G072000' => 'pvu', 'Phvul.006G164800' => 'pvu', 'Phvul.006G185100' => 'pvu', 'Phvul.007G090000' => 'pvu', 'Potri.001G399800' => 'ptr', 'Potri.002G149900' => 'ptr', 'Potri.004G044100' => 'ptr', 'Potri.004G177600' => 'ptr', 'Potri.009G138000' => 'ptr', 'Potri.010G094000' => 'ptr', 'Potri.011G053000' => 'ptr', 'Potri.011G119300' => 'ptr', 'Potri.013G113700' => 'ptr', 'Potri.018G107800' => 'ptr', 'Potri.019G084100' => 'ptr', 'Pp3c14_23720' => 'ppa', 'Pp3c16_6340' => 'ppa', 'Pp3c23_13420' => 'ppa', 'Pp3c24_2740' => 'ppa', 'Pp3c25_860' => 'ppa', 'Pp3c8_21750' => 'ppa', 'Prupe.1G273000' => 'ppe', 'Prupe.1G273700' => 'ppe', 'Prupe.1G274100' => 'ppe', 'Prupe.2G023300' => 'ppe', 'Prupe.4G048000' => 'ppe', 'Prupe.4G080400' => 'ppe', 'Prupe.4G181200' => 'ppe', 'Prupe.8G056900' => 'ppe', 'Prupe.8G168700' => 'ppe', 'Psat1g189080' => 'psa', 'Psat1g204760' => 'psa', 'Psat4g175560' => 'psa', 'Psat4g177720' => 'psa', 'Psat5g244240' => 'psa', 'Psat6g010720' => 'psa', 'Psat6g187200' => 'psa', 'Psat7g072040' => 'psa', 'PSO017G3501' => 'pso', 'PSO063G2148' => 'pso', 'PSO063G5608' => 'pso', 'PSO210G6392' => 'pso', 'PSO541G2319' => 'pso', 'PSO541G2836' => 'pso', 'PSO541G4012' => 'pso', 'PSO541G6253' => 'pso', 'PSO675G0580' => 'pso', 'PSO675G0856' => 'pso', 'PSO675G5635' => 'pso', 'PSO675G9157' => 'pso', 'PSO832G1660' => 'pso', 'PSO832G1969' => 'pso', 'QL02p007186' => 'qlo', 'QL02p033904' => 'qlo', 'QL03p064391' => 'qlo', 'QL05p040593' => 'qlo', 'QL05p058242' => 'qlo', 'QL08p021825' => 'qlo', 'QL11p004981' => 'qlo', 'RcHm_v2.0_Chr1g0318301' => 'rch', 'RcHm_v2.0_Chr4g0418501' => 'rch', 'RcHm_v2.0_Chr4g0439971' => 'rch', 'RcHm_v2.0_Chr5g0008541' => 'rch', 'RcHm_v2.0_Chr5g0014101' => 'rch', 'RcHm_v2.0_Chr5g0014131' => 'rch', 'RcHm_v2.0_Chr5g0033621' => 'rch', 'RcHm_v2.0_Chr6g0272041' => 'rch', 'RcHm_v2.0_Chr6g0278831' => 'rch', 'Rhsim02G0130400' => 'rsi', 'Rhsim02G0171100' => 'rsi', 'Rhsim05G0053000' => 'rsi', 'Rhsim05G0053100' => 'rsi', 'Rhsim06G0096500' => 'rsi', 'Rhsim06G0096600' => 'rsi', 'Rhsim06G0199100' => 'rsi', 'Rhsim12G0062300' => 'rsi', 'Rhsim12G0062800' => 'rsi', 'Sabra02G0118600' => 'sbr', 'Sabra04G0027300' => 'sbr', 'Sabra04G0119500' => 'sbr', 'Sabra08G0112500' => 'sbr', 'Sabra11G0036800' => 'sbr', 'Sabra11G0103800' => 'sbr', 'Sabra13G0096300' => 'sbr', 'Sabra16G0262300' => 'sbr', 'Sabra18G0091700' => 'sbr', 'Sabra19G0095400' => 'sbr', 'SalBow6G3080' => 'sbo', 'SalBow7G1157' => 'sbo', 'SalBow7G2123' => 'sbo', 'SalBow7G2285' => 'sbo', 'SalBow7G3537' => 'sbo', 'SalBow8G2947' => 'sbo', 'SalBow8G4463' => 'sbo', 'SalBow8G5466' => 'sbo', 'Sc01g0001750' => 'sci', 'Sc02g0006640' => 'sci', 'Sc02g0006670' => 'sci', 'Sc04g0008220' => 'sci', 'Sc05g0006190' => 'sci', 'Sc08g0002760' => 'sci', 'Sc17g0006170' => 'sci', 'Sc22g0002050' => 'sci', 'Sc23g0001190' => 'sci', 'Sc24g0000980' => 'sci', 'Sed0006245' => 'sed', 'Sed0007543' => 'sed', 'Sed0009411' => 'sed', 'Sed0010765' => 'sed', 'Sed0012944' => 'sed', 'Sed0014682' => 'sed', 'Sed0016174' => 'sed', 'Sed0016796' => 'sed', 'Sed0020317' => 'sed', 'Sed0021467' => 'sed', 'SEGI_01316' => 'sgi', 'SEGI_03374' => 'sgi', 'SEGI_16265' => 'sgi', 'SEGI_18569' => 'sgi', 'SEGI_20351' => 'sgi', 'SEGI_26395' => 'sgi', 'SEGI_29469' => 'sgi', 'SEGI_34771' => 'sgi', 'SEGI_36769' => 'sgi', 'SEGI_37139' => 'sgi', 'SGA_v2.0_scaffold100G29687' => 'sas', 'SGA_v2.0_scaffold118G32472' => 'sas', 'SGA_v2.0_scaffold14G07051' => 'sas', 'SGA_v2.0_scaffold183G39845' => 'sas', 'SGA_v2.0_scaffold1G00174' => 'sas', 'SGA_v2.0_scaffold22G09714' => 'sas', 'SGA_v2.0_scaffold333G48992' => 'sas', 'SGA_v2.0_scaffold46G17491' => 'sas', 'SGA_v2.0_scaffold49G18294' => 'sas', 'SGA_v2.0_scaffold63G21658' => 'sas', 'SHI01741' => 'shi', 'SHI05771' => 'shi', 'SHI18077' => 'shi', 'SHI20525' => 'shi', 'SHI20527' => 'shi', 'SHI20528' => 'shi', 'SMO172G0185' => 'smo', 'SMO198G0020' => 'smo', 'SMO351G0006' => 'smo', 'SMO356G0118' => 'smo', 'SMO358G0296' => 'smo', 'SMO367G0079' => 'smo', 'SMO367G1277' => 'smo', 'Solyc01g014220.3' => 'sly', 'Solyc01g111770.2' => 'sly', 'Solyc02g078180.3' => 'sly', 'Solyc03g006430.3' => 'sly', 'Solyc03g006456.1' => 'sly', 'Solyc03g079860.2' => 'sly', 'Solyc04g079770.3' => 'sly', 'Solyc05g007430.4' => 'sly', 'Solyc07g063150.3' => 'sly', 'Solyc08g016620.3' => 'sly', 'Solyc09g057590.3' => 'sly', 'Solyc09g057600.1' => 'sly', 'Solyc10g009050.3' => 'sly', 'Solyc11g017420.2' => 'sly', 'Sopen01g053810' => 'spe', 'Sopen02g023040' => 'spe', 'Sopen03g002440' => 'spe', 'Sopen04g033350' => 'spe', 'Sopen05g003310' => 'spe', 'Sopen07g004050' => 'spe', 'Sopen07g031340' => 'spe', 'Sopen08g006990' => 'spe', 'Sopen10g004830' => 'spe', 'Sopen11g009370' => 'spe', 'Sp1g24450' => 'spa', 'Sp1g29670' => 'spa', 'Sp1g39600' => 'spa', 'Sp2g11080' => 'spa', 'Sp2g13970' => 'spa', 'Sp4g16130' => 'spa', 'Sp6g13080' => 'spa', 'Sp7g37270' => 'spa', 'TAR371G0065' => 'tar', 'TAR376G0340' => 'tar', 'TAR376G0435' => 'tar', 'TAR381G0002' => 'tar', 'TAR381G1236' => 'tar', 'TAR624G0055' => 'tar', 'TAR624G0324' => 'tar', 'TAR624G0696' => 'tar', 'TAR624G0906' => 'tar', 'TAR625G0107' => 'tar', 'TAR626G0015' => 'tar', 'TAR626G1356' => 'tar', 'TAR627G0888' => 'tar', 'TAR628G0399' => 'tar', 'TAR628G1327' => 'tar', 'TAR629G2831' => 'tar', 'TAR629G2874' => 'tar', 'TAR633G1432' => 'tar', 'TAR633G2771' => 'tar', 'THA.LOC104803394' => 'tha', 'THA.LOC104805153' => 'tha', 'THA.LOC104806784' => 'tha', 'THA.LOC104810473' => 'tha', 'THA.LOC104813100' => 'tha', 'THA.LOC104814215' => 'tha', 'THA.LOC104815554' => 'tha', 'THA.LOC104820544' => 'tha', 'THA.LOC104824754' => 'tha', 'THA.LOC104827717' => 'tha', 'Thecc.02G031400' => 'tca', 'Thecc.02G055900' => 'tca', 'Thecc.02G350800' => 'tca', 'Thecc.06G150900' => 'tca', 'Thecc.06G186600' => 'tca', 'Thecc.07G089600' => 'tca', 'Thecc.08G020400' => 'tca', 'Thecc.08G182100' => 'tca', 'Thhalv10000873m.g' => 'esa', 'Thhalv10004185m.g' => 'esa', 'Thhalv10006981m.g' => 'esa', 'Thhalv10007204m.g' => 'esa', 'Thhalv10011374m.g' => 'esa', 'Thhalv10013482m.g' => 'esa', 'Thhalv10017801m.g' => 'esa', 'Thhalv10024983m.g' => 'esa', 'TPR.G12072' => 'tpr', 'TPR.G15769' => 'tpr', 'TPR.G16504' => 'tpr', 'TPR.G16506' => 'tpr', 'TPR.G24345' => 'tpr', 'TPR.G26666' => 'tpr', 'TPR.G27320' => 'tpr', 'TPR.G31819' => 'tpr', 'TPR.G38879' => 'tpr', 'TPR.G39015' => 'tpr', 'TPR.G8819' => 'tpr', 'TWI09G0924' => 'twi', 'TWI12G0811' => 'twi', 'TWI12G1294' => 'twi', 'TWI31G0150' => 'twi', 'TWI36G1262' => 'twi', 'TWI38G1287' => 'twi', 'TWI38G1633' => 'twi', 'TWI38G1982' => 'twi', 'TWI39G0116' => 'twi', 'TWI60G1011' => 'twi', 'TWI63G0171' => 'twi', 'TWI73G0839' => 'twi', 'TWI79G1511' => 'twi', 'unitig_0.g915' => 'ugi', 'unitig_0.g916' => 'ugi', 'unitig_21.g20219' => 'ugi', 'unitig_21.g20416' => 'ugi', 'unitig_578.g16132' => 'ugi', 'unitig_578.g16718' => 'ugi', 'unitig_62.g23481' => 'ugi', 'unitig_744.g24535' => 'ugi', 'unitig_749.g13525' => 'ugi', 'vmacro01248' => 'vma', 'vmacro02290' => 'vma', 'vmacro10946' => 'vma', 'vmacro11865' => 'vma', 'vmacro12493' => 'vma', 'vmacro17322' => 'vma', 'vmacro21599' => 'vma', 'vmacro23041' => 'vma', 'VMungo0251G0004' => 'vmu', 'VMungo0251G2639' => 'vmu', 'VMungo0251G2967' => 'vmu', 'VMungo0540G0864' => 'vmu', 'VMungo0540G1569' => 'vmu', 'VMungo0647G0317' => 'vmu', 'VMungo0720G1373' => 'vmu', 'VMungo0720G1508' => 'vmu', 'VMungo1080G0485' => 'vmu', 'VMungo1215G3177' => 'vmu', 'Zm00001eb112600' => 'zma', 'Zm00001eb120220' => 'zma', 'Zm00001eb153240' => 'zma', 'Zm00001eb168880' => 'zma', 'Zm00001eb213920' => 'zma', 'Zm00001eb228280' => 'zma', 'Zm00001eb254580' => 'zma', 'Zm00001eb272180' => 'zma', 'Zm00001eb293190' => 'zma', 'Zm00001eb322930' => 'zma', 'Zm00001eb353360' => 'zma', 'Zm00001eb353390' => 'zma', 'Zm00001eb353430' => 'zma', 'Zm00001eb353440' => 'zma', 'Zm00001eb353780' => 'zma' ), 'gf_id' => 'HOM05D000499', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000499' ), 'data_identifier' => 'HOM05D000499', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000499', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1066', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p29780' => 'bna', 'A02p33180' => 'bna', 'A03p16470' => 'bna', 'A03p66010' => 'bna', 'A04p25970' => 'bna', 'A06p01270' => 'bna', 'A06p46080' => 'bna', 'A07p11400' => 'bna', 'A08p01840' => 'bna', 'A08p08230' => 'bna', 'A08p25740' => 'bna', 'A09p32070' => 'bna', 'A09p37830' => 'bna', 'A09p42840' => 'bna', 'A09p42850' => 'bna', 'Aa31LG10G2060' => 'aar', 'Aa31LG2G7410' => 'aar', 'Aa31LG6G10200' => 'aar', 'Aa31LG6G16680' => 'aar', 'Aa31LG6G8470' => 'aar', 'Aa31LG9G12730' => 'aar', 'Aa31LG9G13680' => 'aar', 'Aa31LG9G14920' => 'aar', 'Aa31LG9G6650' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4977' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5467' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3254' => 'aag', 'Actinidia02578' => 'ach', 'Actinidia07693' => 'ach', 'Actinidia08413' => 'ach', 'Actinidia08414' => 'ach', 'Actinidia15289' => 'ach', 'Actinidia19871' => 'ach', 'Actinidia21475' => 'ach', 'Actinidia22576' => 'ach', 'Actinidia28327' => 'ach', 'Actinidia32491' => 'ach', 'Actinidia39463' => 'ach', 'Actinidia39571' => 'ach', 'Ah.01g013750' => 'amhyb', 'Ah.01g023210' => 'amhyb', 'Ah.04g164850' => 'amhyb', 'Ah.05g178060' => 'amhyb', 'Ah.07g204270' => 'amhyb', 'Ah.07g208480' => 'amhyb', 'Ah.09g237410' => 'amhyb', 'Ah.14g089460' => 'amhyb', 'AL1G41790' => 'aly', 'AL1G49050' => 'aly', 'AL1G53810' => 'aly', 'AL1G61400' => 'aly', 'AL4G18580' => 'aly', 'AL5G12510' => 'aly', 'AL5G12540' => 'aly', 'AL6G43230' => 'aly', 'AL7G10370' => 'aly', 'AL7G19250' => 'aly', 'AL8G12240' => 'aly', 'AL8G18540' => 'aly', 'Aqoxy1G02409' => 'aox', 'Aqoxy2G03993' => 'aox', 'Aqoxy3G03357' => 'aox', 'Aqoxy4G00785' => 'aox', 'Aqoxy5G02598' => 'aox', 'Aqoxy6G00132' => 'aox', 'Aqoxy7G01776' => 'aox', 'Aqoxy7G02316' => 'aox', 'Aqoxy7G03973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.12AFKW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B8730' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27IQR1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3F75VG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3RE0GA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41TCQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.527VTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FIR39' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5W8UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DA38EV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ63HS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H1I32C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HC27T5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4M8AP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7N3CZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9UVDZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LS1NQA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT1D4B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SKC4TM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCFV76' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF9Q1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQWD9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1ZM88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WE07RT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YCK7VH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJE6Q6' => 'arhy', 'AT1G28240' => 'ath', 'AT1G34550' => 'ath', 'AT1G53040' => 'ath', 'AT2G02910' => 'ath', 'AT4G09630' => 'ath', 'AT4G38500' => 'ath', 'AT5G42660' => 'ath', 'AT5G46220' => 'ath', 'ATR0152G026' => 'atr', 'ATR0564G343' => 'atr', 'ATR0706G151' => 'atr', 'ATR0733G207' => 'atr', 'ATR0751G234' => 'atr', 'ATR0807G048' => 'atr', 'ATR1091G084' => 'atr', 'Atru.chr10.1229' => 'acertr', 'Atru.chr10.1230' => 'acertr', 'Atru.chr10.1874' => 'acertr', 'Atru.chr11.1808' => 'acertr', 'Atru.chr13.1795' => 'acertr', 'Atru.chr13.570' => 'acertr', 'Atru.chr2.2608' => 'acertr', 'Atru.chr2.2609' => 'acertr', 'Atru.chr5.3428' => 'acertr', 'Atru.chr8.1171' => 'acertr', 'AUR62004651' => 'cqu', 'AUR62008675' => 'cqu', 'AUR62010014' => 'cqu', 'AUR62013004' => 'cqu', 'AUR62014825' => 'cqu', 'AUR62015015' => 'cqu', 'AUR62015151' => 'cqu', 'AUR62017020' => 'cqu', 'AUR62019422' => 'cqu', 'AUR62023570' => 'cqu', 'AUR62025571' => 'cqu', 'AUR62029098' => 'cqu', 'AUR62033863' => 'cqu', 'AUR62034296' => 'cqu', 'AUR62040075' => 'cqu', 'BcaB02g07334' => 'bca', 'BcaB02g10575' => 'bca', 'BcaB03g12119' => 'bca', 'BcaB03g12120' => 'bca', 'BcaB03g13945' => 'bca', 'BcaB04g17123' => 'bca', 'BcaB04g17867' => 'bca', 'BcaB04g19839' => 'bca', 'BcaB07g30317' => 'bca', 'BcaB07g32432' => 'bca', 'BcaB07g33362' => 'bca', 'BcaB08g36611' => 'bca', 'BcaC01g00028' => 'bca', 'BcaC01g01356' => 'bca', 'BcaC01g02034' => 'bca', 'BcaC01g06051' => 'bca', 'BcaC03g16839' => 'bca', 'BcaC03g17176' => 'bca', 'BcaC05g26829' => 'bca', 'BcaC06g31490' => 'bca', 'BcaC06g35344' => 'bca', 'BcaC06g36570' => 'bca', 'BcaC07g37537' => 'bca', 'BcaC08g43491' => 'bca', 'BcaC08g43773' => 'bca', 'BcaNung00234' => 'bca', 'BcaNung01982' => 'bca', 'BcaNung03707' => 'bca', 'BcaNung06454' => 'bca', 'BolC2t10762H' => 'bol', 'BolC2t11191H' => 'bol', 'BolC3t14322H' => 'bol', 'BolC3t19747H' => 'bol', 'BolC3t21425H' => 'bol', 'BolC4t27800H' => 'bol', 'BolC5t31423H' => 'bol', 'BolC6t35951H' => 'bol', 'BolC6t36282H' => 'bol', 'BolC7t40678H' => 'bol', 'BolC7t40679H' => 'bol', 'BolC7t42222H' => 'bol', 'BolC7t43492H' => 'bol', 'BolC7t46785H' => 'bol', 'BolC8t47853H' => 'bol', 'BolC9t56805H' => 'bol', 'BraA02t08000Z' => 'bra', 'BraA02t08341Z' => 'bra', 'BraA03t10936Z' => 'bra', 'BraA03t15657Z' => 'bra', 'BraA04t18100Z' => 'bra', 'BraA05t20523Z' => 'bra', 'BraA06t23353Z' => 'bra', 'BraA06t27473Z' => 'bra', 'BraA06t27769Z' => 'bra', 'BraA07t28928Z' => 'bra', 'BraA08t32236Z' => 'bra', 'BraA08t32841Z' => 'bra', 'BraA08t34524Z' => 'bra', 'BraA09t38742Z' => 'bra', 'BraA09t39295Z' => 'bra', 'C02p47180' => 'bna', 'C02p50990' => 'bna', 'C03p19360' => 'bna', 'C03p74950' => 'bna', 'C03p91000' => 'bna', 'C04p63260' => 'bna', 'C05p27050' => 'bna', 'C06p08750' => 'bna', 'C06p11490' => 'bna', 'C07p02820' => 'bna', 'C07p17180' => 'bna', 'C07p29440' => 'bna', 'C07p63730' => 'bna', 'C09p39260' => 'bna', 'CAN.G1164.34' => 'can', 'CAN.G1164.39' => 'can', 'CAN.G1530.3' => 'can', 'CAN.G162.61' => 'can', 'CAN.G176.6' => 'can', 'CAN.G289.49' => 'can', 'CAN.G370.21' => 'can', 'CAN.G370.22' => 'can', 'CAN.G371.117' => 'can', 'CAN.G58.37' => 'can', 'CAN.G588.98' => 'can', 'CANSAT21G2266' => 'cansat', 'CANSAT25G2799' => 'cansat', 'CANSAT35G0862' => 'cansat', 'CANSAT35G1704' => 'cansat', 'CANSAT35G1760' => 'cansat', 'CANSAT56G3971' => 'cansat', 'CANSAT56G4116' => 'cansat', 'CANSAT80G1259' => 'cansat', 'CARHR027730' => 'chi', 'CARHR033880' => 'chi', 'CARHR043270' => 'chi', 'CARHR145330' => 'chi', 'CARHR145340' => 'chi', 'CARHR175570' => 'chi', 'CARHR181570' => 'chi', 'CARHR258470' => 'chi', 'CARHR260490' => 'chi', 'CARHR294220' => 'chi', 'Carub.0001s2668' => 'cru', 'Carub.0001s3257' => 'cru', 'Carub.0001s4220' => 'cru', 'Carub.0005s0179' => 'cru', 'Carub.0006s2807' => 'cru', 'Carub.0007s0039' => 'cru', 'Carub.0008s0169' => 'cru', 'Carub.0008s0636' => 'cru', 'Ca_00338_v3' => 'car', 'Ca_00542_v3' => 'car', 'Ca_01844_v3' => 'car', 'Ca_10611_v3' => 'car', 'Ca_13326_v3' => 'car', 'Ca_17944_v3' => 'car', 'Ca_18546_v3' => 'car', 'Ca_24219_v3' => 'car', 'Ca_29972_v3' => 'car', 'CBR_g3681' => 'cbr', 'CBR_g40021' => 'cbr', 'Cc01_g08140' => 'ccan', 'Cc02_g13410' => 'ccan', 'Cc02_g37480' => 'ccan', 'Cc05_g12030' => 'ccan', 'Cc09_g03370' => 'ccan', 'Cc09_g10300' => 'ccan', 'Cc10_g03530' => 'ccan', 'Cc10_g11380' => 'ccan', 'CDE01G0176' => 'cde', 'CDE02G0675' => 'cde', 'CDE02G0942' => 'cde', 'CDE02G1153' => 'cde', 'CDE02G4177' => 'cde', 'CDE04G2117' => 'cde', 'CDE04G2736' => 'cde', 'CDE08G1161' => 'cde', 'CDE09G1238' => 'cde', 'Cfa000467' => 'cfa', 'Cfa000947' => 'cfa', 'Cfa004969' => 'cfa', 'Cfa005284' => 'cfa', 'Cfa008993' => 'cfa', 'Cfa018187' => 'cfa', 'Cfa018454' => 'cfa', 'Cfa020585' => 'cfa', 'Ciclev10000424m.g' => 'ccl', 'Ciclev10003605m.g' => 'ccl', 'Ciclev10007828m.g' => 'ccl', 'Ciclev10014620m.g' => 'ccl', 'Ciclev10015169m.g' => 'ccl', 'Ciclev10018291m.g' => 'ccl', 'Ciclev10028256m.g' => 'ccl', 'Ciclev10033822m.g' => 'ccl', 'CiPaw.05G060300' => 'cil', 'CiPaw.05G085000' => 'cil', 'CiPaw.06G083700' => 'cil', 'CiPaw.06G120300' => 'cil', 'CiPaw.09G060500' => 'cil', 'CiPaw.09G123800' => 'cil', 'CiPaw.11G169700' => 'cil', 'CiPaw.12G118300' => 'cil', 'CiPaw.15G071000' => 'cil', 'CiPaw.15G081900' => 'cil', 'ClCG01G024610' => 'cla', 'ClCG03G006070' => 'cla', 'ClCG05G019250' => 'cla', 'ClCG09G009500' => 'cla', 'ClCG11G008200' => 'cla', 'ClCG11G018080' => 'cla', 'COL.COLO4_17373' => 'col', 'COL.COLO4_22994' => 'col', 'COL.COLO4_26389' => 'col', 'COL.COLO4_27170' => 'col', 'COL.COLO4_31074' => 'col', 'COL.COLO4_31465' => 'col', 'COL.COLO4_36438' => 'col', 'COL.COLO4_36439' => 'col', 'Cpa.g.c38781' => 'cpa', 'Cpa.g.sc128.12' => 'cpa', 'Cpa.g.sc166.7' => 'cpa', 'Cpa.g.sc166.8' => 'cpa', 'Cpa.g.sc20.111' => 'cpa', 'Cpa.g.sc27.31' => 'cpa', 'Cpa.g.sc64.36' => 'cpa', 'Cpa.g.sc64.37' => 'cpa', 'Cpa.g.sc66.49' => 'cpa', 'Cpa.g.sc80.64' => 'cpa', 'CsaV3_1G012320' => 'csa', 'CsaV3_2G008480' => 'csa', 'CsaV3_2G033450' => 'csa', 'CsaV3_3G044830' => 'csa', 'CsaV3_4G033710' => 'csa', 'CsaV3_6G051730' => 'csa', 'CsaV3_7G025350' => 'csa', 'CSS0001067' => 'camsi', 'CSS0005996' => 'camsi', 'CSS0006590' => 'camsi', 'CSS0009673' => 'camsi', 'CSS0010201' => 'camsi', 'CSS0010549' => 'camsi', 'CSS0011364' => 'camsi', 'CSS0014473' => 'camsi', 'CSS0014961' => 'camsi', 'CSS0020191' => 'camsi', 'CSS0021165' => 'camsi', 'CSS0022306' => 'camsi', 'CSS0030591' => 'camsi', 'CSS0030696' => 'camsi', 'CSS0032653' => 'camsi', 'CSS0037487' => 'camsi', 'CSS0041102' => 'camsi', 'CSS0041261' => 'camsi', 'CSS0046246' => 'camsi', 'CSS0049256' => 'camsi', 'DCAR_004075' => 'dca', 'DCAR_011538' => 'dca', 'DCAR_019553' => 'dca', 'DCAR_020952' => 'dca', 'DCAR_021739' => 'dca', 'DCAR_027407' => 'dca', 'DCAR_027913' => 'dca', 'DCAR_028066' => 'dca', 'Dinv05899' => 'din', 'Dinv07563' => 'din', 'Dinv08010' => 'din', 'Dinv14125' => 'din', 'Dinv20172' => 'din', 'Dinv30743' => 'din', 'Dinv31229' => 'din', 'Dinv34162' => 'din', 'Dinv36028' => 'din', 'Dinv39368' => 'din', 'Dinv40565' => 'din', 'Dinv41706' => 'din', 'Duzib052G0089' => 'dzi', 'Duzib116G0641' => 'dzi', 'Duzib132G0069' => 'dzi', 'Duzib132G1219' => 'dzi', 'Duzib147G0278' => 'dzi', 'Duzib160G0480' => 'dzi', 'Duzib170G0661' => 'dzi', 'Duzib177G0591' => 'dzi', 'Duzib187G1353' => 'dzi', 'Duzib192G0858' => 'dzi', 'Duzib192G0883' => 'dzi', 'Duzib213G0506' => 'dzi', 'Duzib235G0289' => 'dzi', 'Duzib251G0422' => 'dzi', 'ECA232G3898' => 'eca', 'ECA233G5950' => 'eca', 'ECA234G1699' => 'eca', 'ECA234G2421' => 'eca', 'ECA236G0426' => 'eca', 'ECA236G4331' => 'eca', 'ECA248G2573' => 'eca', 'EL10Ac1g00077' => 'bvu', 'EL10Ac1g01746' => 'bvu', 'EL10Ac2g03464' => 'bvu', 'EL10Ac4g08176' => 'bvu', 'EL10Ac7g17521' => 'bvu', 'EL10Ac8g20386' => 'bvu', 'EL10Ac9g21343' => 'bvu', 'EL10Ac9g22688' => 'bvu', 'Eucgr.B03434' => 'egr', 'Eucgr.D00618' => 'egr', 'Eucgr.E02395' => 'egr', 'Eucgr.F01129' => 'egr', 'Eucgr.F02622' => 'egr', 'Eucgr.F04207' => 'egr', 'FAN01G0570' => 'fan', 'FAN03G3351' => 'fan', 'FAN06G3702' => 'fan', 'FAN07G2149' => 'fan', 'FAN10G3758' => 'fan', 'FAN11G1170' => 'fan', 'FAN11G2050' => 'fan', 'FAN11G2724' => 'fan', 'FAN12G1700' => 'fan', 'FAN12G2028' => 'fan', 'FAN15G1160' => 'fan', 'FAN15G3063' => 'fan', 'FAN16G2540' => 'fan', 'FAN16G3077' => 'fan', 'FAN16G3624' => 'fan', 'FAN17G0221' => 'fan', 'FAN20G2492' => 'fan', 'FAN20G2905' => 'fan', 'FAN21G0548' => 'fan', 'FAN21G1300' => 'fan', 'FAN22G0077' => 'fan', 'FAN22G1315' => 'fan', 'FAN24G1280' => 'fan', 'FAN24G1445' => 'fan', 'FAN24G3527' => 'fan', 'FAN25G0464' => 'fan', 'FAN25G2885' => 'fan', 'FAN25G3270' => 'fan', 'FAN27G1101' => 'fan', 'FAN27G2846' => 'fan', 'FAN27G3524' => 'fan', 'FvH4_2g11770' => 'fve', 'FvH4_2g15630' => 'fve', 'FvH4_3g05570' => 'fve', 'FvH4_3g09110' => 'fve', 'FvH4_3g19940' => 'fve', 'FvH4_4g04821' => 'fve', 'FvH4_4g31480' => 'fve', 'FvH4_7g01740' => 'fve', 'Glyma.05G130400' => 'gma', 'Glyma.05G156400' => 'gma', 'Glyma.07G197000' => 'gma', 'Glyma.08G085151' => 'gma', 'Glyma.08G114500' => 'gma', 'Glyma.08G300400' => 'gma', 'Glyma.10G215800' => 'gma', 'Glyma.12G224400' => 'gma', 'Glyma.13G179300' => 'gma', 'Glyma.13G218151' => 'gma', 'Glyma.13G238800' => 'gma', 'Glyma.13G276900' => 'gma', 'Glyma.14G078200' => 'gma', 'Glyma.15G074500' => 'gma', 'Glyma.15G094100' => 'gma', 'Glyma.17G247200' => 'gma', 'Glyma.18G120100' => 'gma', 'Glyma.20G176000' => 'gma', 'Gohir.A01G063600' => 'ghi', 'Gohir.A01G170301' => 'ghi', 'Gohir.A02G060500' => 'ghi', 'Gohir.A05G133850' => 'ghi', 'Gohir.A05G161400' => 'ghi', 'Gohir.A06G012900' => 'ghi', 'Gohir.A06G035901' => 'ghi', 'Gohir.A06G127100' => 'ghi', 'Gohir.A06G210500' => 'ghi', 'Gohir.A08G008650' => 'ghi', 'Gohir.A09G072700' => 'ghi', 'Gohir.A09G088301' => 'ghi', 'Gohir.A10G040600' => 'ghi', 'Gohir.A12G036300' => 'ghi', 'Gohir.A12G143350' => 'ghi', 'Gohir.A12G165500' => 'ghi', 'Gohir.A13G145700' => 'ghi', 'Gohir.D01G050000' => 'ghi', 'Gohir.D01G051366' => 'ghi', 'Gohir.D01G161350' => 'ghi', 'Gohir.D02G065900' => 'ghi', 'Gohir.D05G164200' => 'ghi', 'Gohir.D05G355500' => 'ghi', 'Gohir.D06G010400' => 'ghi', 'Gohir.D06G111250' => 'ghi', 'Gohir.D06G132000' => 'ghi', 'Gohir.D06G210500' => 'ghi', 'Gohir.D07G165675' => 'ghi', 'Gohir.D08G062240' => 'ghi', 'Gohir.D08G086101' => 'ghi', 'Gohir.D08G138060' => 'ghi', 'Gohir.D09G072300' => 'ghi', 'Gohir.D10G041400' => 'ghi', 'Gohir.D11G191020' => 'ghi', 'Gohir.D11G212066' => 'ghi', 'Gohir.D12G036300' => 'ghi', 'Gohir.D12G168600' => 'ghi', 'Gohir.D13G150600' => 'ghi', 'Gorai.001G057300' => 'gra', 'Gorai.002G069900' => 'gra', 'Gorai.002G200000' => 'gra', 'Gorai.003G067600' => 'gra', 'Gorai.005G074800' => 'gra', 'Gorai.006G087300' => 'gra', 'Gorai.008G037500' => 'gra', 'Gorai.008G181400' => 'gra', 'Gorai.009G169400' => 'gra', 'Gorai.009G387900' => 'gra', 'Gorai.010G013300' => 'gra', 'Gorai.010G153800' => 'gra', 'Gorai.010G255800' => 'gra', 'Gorai.011G043700' => 'gra', 'Gorai.011G198900' => 'gra', 'Gorai.013G168400' => 'gra', 'GSVIVG01005212001' => 'vvi', 'GSVIVG01006163001' => 'vvi', 'GSVIVG01009625001' => 'vvi', 'GSVIVG01014338001' => 'vvi', 'GSVIVG01020005001' => 'vvi', 'GSVIVG01021450001' => 'vvi', 'GSVIVG01023975001' => 'vvi', 'GSVIVG01034490001' => 'vvi', 'HanXRQChr04g0112071' => 'han', 'HanXRQChr05g0131151' => 'han', 'HanXRQChr09g0262371' => 'han', 'HanXRQChr09g0268401' => 'han', 'HanXRQChr10g0279241' => 'han', 'HanXRQChr10g0297961' => 'han', 'HanXRQChr11g0326231' => 'han', 'HanXRQChr11g0328471' => 'han', 'HanXRQChr16g0507941' => 'han', 'HanXRQChr17g0560211' => 'han', 'Haze_02108' => 'cav', 'Haze_02428' => 'cav', 'Haze_05593' => 'cav', 'Haze_06448' => 'cav', 'Haze_09427' => 'cav', 'Haze_12022' => 'cav', 'Haze_17612' => 'cav', 'Haze_17928' => 'cav', 'Hma1.2p1_0032F.1_g019250' => 'hma', 'Hma1.2p1_0163F.1_g072690' => 'hma', 'Hma1.2p1_0265F.1_g106710' => 'hma', 'Hma1.2p1_0286F.1_g113970' => 'hma', 'Hma1.2p1_0363F.1_g136640' => 'hma', 'Hma1.2p1_0584F.1_g183470' => 'hma', 'Hma1.2p1_0885F.1_g232570' => 'hma', 'HPP92_006022' => 'vpl', 'HPP92_007320' => 'vpl', 'HPP92_011521' => 'vpl', 'HPP92_019387' => 'vpl', 'HPP92_024038' => 'vpl', 'Hund05891' => 'sun', 'Hund06450' => 'sun', 'Hund12053' => 'sun', 'Hund16800' => 'sun', 'Hund21222' => 'sun', 'Hund22896' => 'sun', 'Hund23746' => 'sun', 'Hund27083' => 'sun', 'Lalb_Chr02g0141831' => 'lal', 'Lalb_Chr02g0141841' => 'lal', 'Lalb_Chr05g0220411' => 'lal', 'Lalb_Chr06g0162081' => 'lal', 'Lalb_Chr09g0327651' => 'lal', 'Lalb_Chr13g0295051' => 'lal', 'Lalb_Chr15g0086801' => 'lal', 'Lalb_Chr16g0383781' => 'lal', 'Lalb_Chr16g0383791' => 'lal', 'Lalb_Chr18g0055441' => 'lal', 'Lalb_Chr18g0059611' => 'lal', 'Lalb_Chr20g0109661' => 'lal', 'Lalb_Chr20g0109831' => 'lal', 'Lalb_Chr20g0121871' => 'lal', 'Lalb_Chr22g0355361' => 'lal', 'Lalb_Chr25g0286371' => 'lal', 'Lj1A1187G43' => 'lonja', 'Lj1A1205T50' => 'lonja', 'Lj1A800G33' => 'lonja', 'Lj1C1187T7' => 'lonja', 'Lj1C843T11' => 'lonja', 'Lj1g0010940' => 'lja', 'Lj2A288T69' => 'lonja', 'Lj3g0024276' => 'lja', 'Lj4A47T76' => 'lonja', 'Lj4g0005805' => 'lja', 'Lj4g0006097' => 'lja', 'Lj4g0008528' => 'lja', 'Lj4g0024907' => 'lja', 'Lj5g0012472' => 'lja', 'Lj5g0018648' => 'lja', 'Lj6C789G1' => 'lonja', 'Lj6g0004000' => 'lja', 'Lj7A292G67' => 'lonja', 'Lj7A292T64' => 'lonja', 'Lj9A400T58' => 'lonja', 'Lsat_1_v5_gn_1_126181' => 'lsa', 'Lsat_1_v5_gn_4_123041' => 'lsa', 'Lsat_1_v5_gn_4_133620' => 'lsa', 'Lsat_1_v5_gn_4_53221' => 'lsa', 'Lsat_1_v5_gn_4_71961' => 'lsa', 'Lsat_1_v5_gn_7_105241' => 'lsa', 'Lsat_1_v5_gn_7_21361' => 'lsa', 'Lsat_1_v5_gn_7_28860' => 'lsa', 'Lsat_1_v5_gn_7_31260' => 'lsa', 'Lsat_1_v5_gn_8_52801' => 'lsa', 'Manes.02G191400' => 'mes', 'Manes.03G110100' => 'mes', 'Manes.04G071100' => 'mes', 'Manes.05G100500' => 'mes', 'Manes.05G164700' => 'mes', 'Manes.15G087000' => 'mes', 'Manes.15G121500' => 'mes', 'Manes.16G028300' => 'mes', 'Manes.17G046100' => 'mes', 'Manes.17G069800' => 'mes', 'Manes.18G100500' => 'mes', 'Mapoly0002s0109' => 'mpo', 'Mapoly0024s0007' => 'mpo', 'Mapoly0089s0032' => 'mpo', 'MBI04_g42241_MAGBIO' => 'mbi', 'MBI05_g11988_MAGBIO' => 'mbi', 'MBI05_g35452_MAGBIO' => 'mbi', 'MBI07_g30179_MAGBIO' => 'mbi', 'MBI07_g35859_MAGBIO' => 'mbi', 'MBI07_g35860_MAGBIO' => 'mbi', 'MBI07_g37166_MAGBIO' => 'mbi', 'MBI08_g18172_MAGBIO' => 'mbi', 'MBI09_g08441_MAGBIO' => 'mbi', 'MBI13_g01676_MAGBIO' => 'mbi', 'MBI14_g42955_MAGBIO' => 'mbi', 'MBI16_g13161_MAGBIO' => 'mbi', 'MBI17_g27204_MAGBIO' => 'mbi', 'MBI19_g21595_MAGBIO' => 'mbi', 'MD00G1148400' => 'mdo', 'MD02G1301200' => 'mdo', 'MD03G1227800' => 'mdo', 'MD05G1041100' => 'mdo', 'MD05G1124800' => 'mdo', 'MD05G1284000' => 'mdo', 'MD05G1338800' => 'mdo', 'MD05G1338900' => 'mdo', 'MD07G1022800' => 'mdo', 'MD10G1047500' => 'mdo', 'MD10G1127500' => 'mdo', 'MD10G1262300' => 'mdo', 'MD10G1293800' => 'mdo', 'MD16G1074300' => 'mdo', 'Medtr1g021670' => 'mtr', 'Medtr1g096320' => 'mtr', 'Medtr2g013690' => 'mtr', 'Medtr2g019450' => 'mtr', 'Medtr2g085170' => 'mtr', 'Medtr4g088785' => 'mtr', 'Medtr8g055930' => 'mtr', 'Medtr8g085850' => 'mtr', 'MELO3C002605.2' => 'cme', 'MELO3C003891.2' => 'cme', 'MELO3C004012.2' => 'cme', 'MELO3C007134.2' => 'cme', 'MELO3C008118.2' => 'cme', 'MELO3C016700.2' => 'cme', 'MELO3C024127.2' => 'cme', 'MELO3C033361.2' => 'cme', 'MELO3C033362.2' => 'cme', 'Migut.C00430' => 'egut', 'Migut.C01246' => 'egut', 'Migut.E00101' => 'egut', 'Migut.H01486' => 'egut', 'Migut.H01939' => 'egut', 'Migut.K00360' => 'egut', 'Migut.M00910' => 'egut', 'Migut.M01139' => 'egut', 'Migut.N02677' => 'egut', 'MSTRG.13252' => 'ama', 'MSTRG.14701' => 'ama', 'MSTRG.1521' => 'ama', 'MSTRG.15884' => 'ama', 'MSTRG.16242' => 'ama', 'MSTRG.22285' => 'ama', 'MSTRG.22444' => 'ama', 'MSTRG.2349' => 'ama', 'MSTRG.26308' => 'ama', 'MSTRG.28296' => 'ama', 'MSTRG.9895' => 'ama', 'Nitab4.5_0000110g0060' => 'nta', 'Nitab4.5_0000420g0130' => 'nta', 'Nitab4.5_0000422g0030' => 'nta', 'Nitab4.5_0000560g0180' => 'nta', 'Nitab4.5_0000703g0100' => 'nta', 'Nitab4.5_0000786g0200' => 'nta', 'Nitab4.5_0001336g0020' => 'nta', 'Nitab4.5_0001796g0030' => 'nta', 'Nitab4.5_0003348g0060' => 'nta', 'Nitab4.5_0003698g0040' => 'nta', 'Nitab4.5_0003942g0090' => 'nta', 'Nitab4.5_0004775g0070' => 'nta', 'Nitab4.5_0004864g0030' => 'nta', 'Nitab4.5_0005615g0020' => 'nta', 'Nitab4.5_0009288g0030' => 'nta', 'Nitab4.5_0009341g0010' => 'nta', 'Nitab4.5_0009535g0010' => 'nta', 'Nn1g03995' => 'nnu', 'Nn1g04100' => 'nnu', 'Nn1g06530' => 'nnu', 'Nn3g16404' => 'nnu', 'Nn3g17212' => 'nnu', 'Nn3g20776' => 'nnu', 'Nn3g21923' => 'nnu', 'Nn5g27737' => 'nnu', 'Nn5g29461' => 'nnu', 'Nn7g38355' => 'nnu', 'Nn8g39873' => 'nnu', 'Oeu000548.2' => 'oeu', 'Oeu004672.1' => 'oeu', 'Oeu015605.2' => 'oeu', 'Oeu016092.1' => 'oeu', 'Oeu017879.3' => 'oeu', 'Oeu024910.1' => 'oeu', 'Oeu028965.1' => 'oeu', 'Oeu031269.1' => 'oeu', 'Oeu031270.1' => 'oeu', 'Oeu032535.1' => 'oeu', 'Oeu034151.1' => 'oeu', 'Oeu034152.1' => 'oeu', 'Oeu034588.2' => 'oeu', 'Oeu050846.1' => 'oeu', 'Oeu050849.2' => 'oeu', 'Oeu051063.2' => 'oeu', 'Oeu052368.1' => 'oeu', 'Oeu052370.1' => 'oeu', 'Os01g0210400' => 'osa', 'Os01g0304300' => 'osa', 'Os01g0749100' => 'osa', 'Os02g0745800' => 'osa', 'Os03g0769050' => 'osa', 'Os05g0531500' => 'osa', 'Os06g0724300' => 'osa', 'Os11g0198100' => 'osa', 'Peaxi162Scf00069g01425' => 'pax', 'Peaxi162Scf00280g00811' => 'pax', 'Peaxi162Scf00310g00615' => 'pax', 'Peaxi162Scf00362g00542' => 'pax', 'Peaxi162Scf00461g00310' => 'pax', 'Peaxi162Scf00530g00118' => 'pax', 'Peaxi162Scf00541g00057' => 'pax', 'Peaxi162Scf00661g00017' => 'pax', 'Peaxi162Scf00926g00027' => 'pax', 'Peaxi162Scf01064g00263' => 'pax', 'Peaxi162Scf01211g00135' => 'pax', 'PGR004G2336' => 'pgr', 'PGR042G0327' => 'pgr', 'PGR042G1957' => 'pgr', 'PGR042G2003' => 'pgr', 'PGR042G3929' => 'pgr', 'PGR083G1137' => 'pgr', 'PGR083G1364' => 'pgr', 'PGSC0003DMG400003381' => 'stu', 'PGSC0003DMG400003417' => 'stu', 'PGSC0003DMG400008981' => 'stu', 'PGSC0003DMG400012417' => 'stu', 'PGSC0003DMG400012823' => 'stu', 'PGSC0003DMG400016885' => 'stu', 'PGSC0003DMG400022812' => 'stu', 'PGSC0003DMG400029726' => 'stu', 'PGSC0003DMG401009243' => 'stu', 'PGSC0003DMG401031505' => 'stu', 'PGSC0003DMG402031505' => 'stu', 'Phvul.001G017600' => 'pvu', 'Phvul.002G193500' => 'pvu', 'Phvul.002G228900' => 'pvu', 'Phvul.002G236800' => 'pvu', 'Phvul.003G049500' => 'pvu', 'Phvul.005G072000' => 'pvu', 'Phvul.006G164800' => 'pvu', 'Phvul.006G185100' => 'pvu', 'Phvul.007G090000' => 'pvu', 'Potri.001G399800' => 'ptr', 'Potri.002G149900' => 'ptr', 'Potri.004G044100' => 'ptr', 'Potri.004G177600' => 'ptr', 'Potri.009G138000' => 'ptr', 'Potri.010G094000' => 'ptr', 'Potri.011G053000' => 'ptr', 'Potri.011G119300' => 'ptr', 'Potri.013G113700' => 'ptr', 'Potri.018G107800' => 'ptr', 'Potri.019G084100' => 'ptr', 'Pp3c14_23720' => 'ppa', 'Pp3c16_6340' => 'ppa', 'Pp3c23_13420' => 'ppa', 'Pp3c24_2740' => 'ppa', 'Pp3c25_860' => 'ppa', 'Pp3c8_21750' => 'ppa', 'Prupe.1G273000' => 'ppe', 'Prupe.1G273700' => 'ppe', 'Prupe.1G274100' => 'ppe', 'Prupe.2G023300' => 'ppe', 'Prupe.4G048000' => 'ppe', 'Prupe.4G080400' => 'ppe', 'Prupe.4G181200' => 'ppe', 'Prupe.8G056900' => 'ppe', 'Prupe.8G168700' => 'ppe', 'Psat1g189080' => 'psa', 'Psat1g204760' => 'psa', 'Psat4g175560' => 'psa', 'Psat4g177720' => 'psa', 'Psat5g244240' => 'psa', 'Psat6g010720' => 'psa', 'Psat6g187200' => 'psa', 'Psat7g072040' => 'psa', 'PSO017G3501' => 'pso', 'PSO063G2148' => 'pso', 'PSO063G5608' => 'pso', 'PSO210G6392' => 'pso', 'PSO541G2319' => 'pso', 'PSO541G2836' => 'pso', 'PSO541G4012' => 'pso', 'PSO541G6253' => 'pso', 'PSO675G0580' => 'pso', 'PSO675G0856' => 'pso', 'PSO675G5635' => 'pso', 'PSO675G9157' => 'pso', 'PSO832G1660' => 'pso', 'PSO832G1969' => 'pso', 'QL02p007186' => 'qlo', 'QL02p033904' => 'qlo', 'QL03p064391' => 'qlo', 'QL05p040593' => 'qlo', 'QL05p058242' => 'qlo', 'QL08p021825' => 'qlo', 'QL11p004981' => 'qlo', 'RcHm_v2.0_Chr1g0318301' => 'rch', 'RcHm_v2.0_Chr4g0418501' => 'rch', 'RcHm_v2.0_Chr4g0439971' => 'rch', 'RcHm_v2.0_Chr5g0008541' => 'rch', 'RcHm_v2.0_Chr5g0014101' => 'rch', 'RcHm_v2.0_Chr5g0014131' => 'rch', 'RcHm_v2.0_Chr5g0033621' => 'rch', 'RcHm_v2.0_Chr6g0272041' => 'rch', 'RcHm_v2.0_Chr6g0278831' => 'rch', 'Rhsim02G0130400' => 'rsi', 'Rhsim02G0171100' => 'rsi', 'Rhsim05G0053000' => 'rsi', 'Rhsim05G0053100' => 'rsi', 'Rhsim06G0096500' => 'rsi', 'Rhsim06G0096600' => 'rsi', 'Rhsim06G0199100' => 'rsi', 'Rhsim12G0062300' => 'rsi', 'Rhsim12G0062800' => 'rsi', 'Sabra02G0118600' => 'sbr', 'Sabra04G0027300' => 'sbr', 'Sabra04G0119500' => 'sbr', 'Sabra08G0112500' => 'sbr', 'Sabra11G0036800' => 'sbr', 'Sabra11G0103800' => 'sbr', 'Sabra13G0096300' => 'sbr', 'Sabra16G0262300' => 'sbr', 'Sabra18G0091700' => 'sbr', 'Sabra19G0095400' => 'sbr', 'SalBow6G3080' => 'sbo', 'SalBow7G1157' => 'sbo', 'SalBow7G2123' => 'sbo', 'SalBow7G2285' => 'sbo', 'SalBow7G3537' => 'sbo', 'SalBow8G2947' => 'sbo', 'SalBow8G4463' => 'sbo', 'SalBow8G5466' => 'sbo', 'Sc01g0001750' => 'sci', 'Sc02g0006640' => 'sci', 'Sc02g0006670' => 'sci', 'Sc04g0008220' => 'sci', 'Sc05g0006190' => 'sci', 'Sc08g0002760' => 'sci', 'Sc17g0006170' => 'sci', 'Sc22g0002050' => 'sci', 'Sc23g0001190' => 'sci', 'Sc24g0000980' => 'sci', 'Sed0006245' => 'sed', 'Sed0007543' => 'sed', 'Sed0009411' => 'sed', 'Sed0010765' => 'sed', 'Sed0012944' => 'sed', 'Sed0014682' => 'sed', 'Sed0016174' => 'sed', 'Sed0016796' => 'sed', 'Sed0020317' => 'sed', 'Sed0021467' => 'sed', 'SEGI_01316' => 'sgi', 'SEGI_03374' => 'sgi', 'SEGI_16265' => 'sgi', 'SEGI_18569' => 'sgi', 'SEGI_20351' => 'sgi', 'SEGI_26395' => 'sgi', 'SEGI_29469' => 'sgi', 'SEGI_34771' => 'sgi', 'SEGI_36769' => 'sgi', 'SEGI_37139' => 'sgi', 'SGA_v2.0_scaffold100G29687' => 'sas', 'SGA_v2.0_scaffold118G32472' => 'sas', 'SGA_v2.0_scaffold14G07051' => 'sas', 'SGA_v2.0_scaffold183G39845' => 'sas', 'SGA_v2.0_scaffold1G00174' => 'sas', 'SGA_v2.0_scaffold22G09714' => 'sas', 'SGA_v2.0_scaffold333G48992' => 'sas', 'SGA_v2.0_scaffold46G17491' => 'sas', 'SGA_v2.0_scaffold49G18294' => 'sas', 'SGA_v2.0_scaffold63G21658' => 'sas', 'SHI01741' => 'shi', 'SHI05771' => 'shi', 'SHI18077' => 'shi', 'SHI20525' => 'shi', 'SHI20527' => 'shi', 'SHI20528' => 'shi', 'SMO172G0185' => 'smo', 'SMO198G0020' => 'smo', 'SMO351G0006' => 'smo', 'SMO356G0118' => 'smo', 'SMO358G0296' => 'smo', 'SMO367G0079' => 'smo', 'SMO367G1277' => 'smo', 'Solyc01g014220.3' => 'sly', 'Solyc01g111770.2' => 'sly', 'Solyc02g078180.3' => 'sly', 'Solyc03g006430.3' => 'sly', 'Solyc03g006456.1' => 'sly', 'Solyc03g079860.2' => 'sly', 'Solyc04g079770.3' => 'sly', 'Solyc05g007430.4' => 'sly', 'Solyc07g063150.3' => 'sly', 'Solyc08g016620.3' => 'sly', 'Solyc09g057590.3' => 'sly', 'Solyc09g057600.1' => 'sly', 'Solyc10g009050.3' => 'sly', 'Solyc11g017420.2' => 'sly', 'Sopen01g053810' => 'spe', 'Sopen02g023040' => 'spe', 'Sopen03g002440' => 'spe', 'Sopen04g033350' => 'spe', 'Sopen05g003310' => 'spe', 'Sopen07g004050' => 'spe', 'Sopen07g031340' => 'spe', 'Sopen08g006990' => 'spe', 'Sopen10g004830' => 'spe', 'Sopen11g009370' => 'spe', 'Sp1g24450' => 'spa', 'Sp1g29670' => 'spa', 'Sp1g39600' => 'spa', 'Sp2g11080' => 'spa', 'Sp2g13970' => 'spa', 'Sp4g16130' => 'spa', 'Sp6g13080' => 'spa', 'Sp7g37270' => 'spa', 'TAR371G0065' => 'tar', 'TAR376G0340' => 'tar', 'TAR376G0435' => 'tar', 'TAR381G0002' => 'tar', 'TAR381G1236' => 'tar', 'TAR624G0055' => 'tar', 'TAR624G0324' => 'tar', 'TAR624G0696' => 'tar', 'TAR624G0906' => 'tar', 'TAR625G0107' => 'tar', 'TAR626G0015' => 'tar', 'TAR626G1356' => 'tar', 'TAR627G0888' => 'tar', 'TAR628G0399' => 'tar', 'TAR628G1327' => 'tar', 'TAR629G2831' => 'tar', 'TAR629G2874' => 'tar', 'TAR633G1432' => 'tar', 'TAR633G2771' => 'tar', 'THA.LOC104803394' => 'tha', 'THA.LOC104805153' => 'tha', 'THA.LOC104806784' => 'tha', 'THA.LOC104810473' => 'tha', 'THA.LOC104813100' => 'tha', 'THA.LOC104814215' => 'tha', 'THA.LOC104815554' => 'tha', 'THA.LOC104820544' => 'tha', 'THA.LOC104824754' => 'tha', 'THA.LOC104827717' => 'tha', 'Thecc.02G031400' => 'tca', 'Thecc.02G055900' => 'tca', 'Thecc.02G350800' => 'tca', 'Thecc.06G150900' => 'tca', 'Thecc.06G186600' => 'tca', 'Thecc.07G089600' => 'tca', 'Thecc.08G020400' => 'tca', 'Thecc.08G182100' => 'tca', 'Thhalv10000873m.g' => 'esa', 'Thhalv10004185m.g' => 'esa', 'Thhalv10006981m.g' => 'esa', 'Thhalv10007204m.g' => 'esa', 'Thhalv10011374m.g' => 'esa', 'Thhalv10013482m.g' => 'esa', 'Thhalv10017801m.g' => 'esa', 'Thhalv10024983m.g' => 'esa', 'TPR.G12072' => 'tpr', 'TPR.G15769' => 'tpr', 'TPR.G16504' => 'tpr', 'TPR.G16506' => 'tpr', 'TPR.G24345' => 'tpr', 'TPR.G26666' => 'tpr', 'TPR.G27320' => 'tpr', 'TPR.G31819' => 'tpr', 'TPR.G38879' => 'tpr', 'TPR.G39015' => 'tpr', 'TPR.G8819' => 'tpr', 'TWI09G0924' => 'twi', 'TWI12G0811' => 'twi', 'TWI12G1294' => 'twi', 'TWI31G0150' => 'twi', 'TWI36G1262' => 'twi', 'TWI38G1287' => 'twi', 'TWI38G1633' => 'twi', 'TWI38G1982' => 'twi', 'TWI39G0116' => 'twi', 'TWI60G1011' => 'twi', 'TWI63G0171' => 'twi', 'TWI73G0839' => 'twi', 'TWI79G1511' => 'twi', 'unitig_0.g915' => 'ugi', 'unitig_0.g916' => 'ugi', 'unitig_21.g20219' => 'ugi', 'unitig_21.g20416' => 'ugi', 'unitig_578.g16132' => 'ugi', 'unitig_578.g16718' => 'ugi', 'unitig_62.g23481' => 'ugi', 'unitig_744.g24535' => 'ugi', 'unitig_749.g13525' => 'ugi', 'vmacro01248' => 'vma', 'vmacro02290' => 'vma', 'vmacro10946' => 'vma', 'vmacro11865' => 'vma', 'vmacro12493' => 'vma', 'vmacro17322' => 'vma', 'vmacro21599' => 'vma', 'vmacro23041' => 'vma', 'VMungo0251G0004' => 'vmu', 'VMungo0251G2639' => 'vmu', 'VMungo0251G2967' => 'vmu', 'VMungo0540G0864' => 'vmu', 'VMungo0540G1569' => 'vmu', 'VMungo0647G0317' => 'vmu', 'VMungo0720G1373' => 'vmu', 'VMungo0720G1508' => 'vmu', 'VMungo1080G0485' => 'vmu', 'VMungo1215G3177' => 'vmu', 'Zm00001eb112600' => 'zma', 'Zm00001eb120220' => 'zma', 'Zm00001eb153240' => 'zma', 'Zm00001eb168880' => 'zma', 'Zm00001eb213920' => 'zma', 'Zm00001eb228280' => 'zma', 'Zm00001eb254580' => 'zma', 'Zm00001eb272180' => 'zma', 'Zm00001eb293190' => 'zma', 'Zm00001eb322930' => 'zma', 'Zm00001eb353360' => 'zma', 'Zm00001eb353390' => 'zma', 'Zm00001eb353430' => 'zma', 'Zm00001eb353440' => 'zma', 'Zm00001eb353780' => 'zma' ) $gf_id = 'HOM05D000499' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000499' ) $data_identifier = 'HOM05D000499' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 29, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 12, 'amhyb' => (int) 8, 'aly' => (int) 12, 'aox' => (int) 9, 'arhy' => (int) 26, 'ath' => (int) 8, 'atr' => (int) 7, 'acertr' => (int) 10, 'cqu' => (int) 15, 'bca' => (int) 29, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 11, 'cansat' => (int) 8, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 9, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 8, 'cpa' => (int) 10, 'csa' => (int) 7, 'camsi' => (int) 20, 'dca' => (int) 8, 'din' => (int) 12, 'dzi' => (int) 14, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 6, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 38, 'gra' => (int) 16, 'vvi' => (int) 8, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 5, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 11, 'lja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 11, 'mpo' => (int) 3, 'mbi' => (int) 14, 'mdo' => (int) 14, 'mtr' => (int) 8, 'cme' => (int) 9, 'egut' => (int) 9, 'ama' => (int) 11, 'nta' => (int) 17, 'nnu' => (int) 11, 'oeu' => (int) 18, 'osa' => (int) 8, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 6, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 9, 'rsi' => (int) 9, 'sbr' => (int) 10, 'sbo' => (int) 8, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 10, 'sas' => (int) 10, 'shi' => (int) 6, 'smo' => (int) 7, 'sly' => (int) 14, 'spe' => (int) 10, 'spa' => (int) 8, 'tar' => (int) 19, 'tha' => (int) 10, 'tca' => (int) 8, 'esa' => (int) 8, 'tpr' => (int) 11, 'twi' => (int) 13, 'ugi' => (int) 9, 'vma' => (int) 8, 'vmu' => (int) 10, 'zma' => (int) 15 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb353780' $species_info = array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ) $local_species = 'egut' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000499', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1066', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p29780' => 'bna', 'A02p33180' => 'bna', 'A03p16470' => 'bna', 'A03p66010' => 'bna', 'A04p25970' => 'bna', 'A06p01270' => 'bna', 'A06p46080' => 'bna', 'A07p11400' => 'bna', 'A08p01840' => 'bna', 'A08p08230' => 'bna', 'A08p25740' => 'bna', 'A09p32070' => 'bna', 'A09p37830' => 'bna', 'A09p42840' => 'bna', 'A09p42850' => 'bna', 'Aa31LG10G2060' => 'aar', 'Aa31LG2G7410' => 'aar', 'Aa31LG6G10200' => 'aar', 'Aa31LG6G16680' => 'aar', 'Aa31LG6G8470' => 'aar', 'Aa31LG9G12730' => 'aar', 'Aa31LG9G13680' => 'aar', 'Aa31LG9G14920' => 'aar', 'Aa31LG9G6650' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4977' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5467' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3254' => 'aag', 'Actinidia02578' => 'ach', 'Actinidia07693' => 'ach', 'Actinidia08413' => 'ach', 'Actinidia08414' => 'ach', 'Actinidia15289' => 'ach', 'Actinidia19871' => 'ach', 'Actinidia21475' => 'ach', 'Actinidia22576' => 'ach', 'Actinidia28327' => 'ach', 'Actinidia32491' => 'ach', 'Actinidia39463' => 'ach', 'Actinidia39571' => 'ach', 'Ah.01g013750' => 'amhyb', 'Ah.01g023210' => 'amhyb', 'Ah.04g164850' => 'amhyb', 'Ah.05g178060' => 'amhyb', 'Ah.07g204270' => 'amhyb', 'Ah.07g208480' => 'amhyb', 'Ah.09g237410' => 'amhyb', 'Ah.14g089460' => 'amhyb', 'AL1G41790' => 'aly', 'AL1G49050' => 'aly', 'AL1G53810' => 'aly', 'AL1G61400' => 'aly', 'AL4G18580' => 'aly', 'AL5G12510' => 'aly', 'AL5G12540' => 'aly', 'AL6G43230' => 'aly', 'AL7G10370' => 'aly', 'AL7G19250' => 'aly', 'AL8G12240' => 'aly', 'AL8G18540' => 'aly', 'Aqoxy1G02409' => 'aox', 'Aqoxy2G03993' => 'aox', 'Aqoxy3G03357' => 'aox', 'Aqoxy4G00785' => 'aox', 'Aqoxy5G02598' => 'aox', 'Aqoxy6G00132' => 'aox', 'Aqoxy7G01776' => 'aox', 'Aqoxy7G02316' => 'aox', 'Aqoxy7G03973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.12AFKW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B8730' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27IQR1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3F75VG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3RE0GA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41TCQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.527VTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FIR39' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5W8UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DA38EV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ63HS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H1I32C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HC27T5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4M8AP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7N3CZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9UVDZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LS1NQA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT1D4B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SKC4TM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCFV76' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF9Q1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQWD9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1ZM88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WE07RT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YCK7VH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJE6Q6' => 'arhy', 'AT1G28240' => 'ath', 'AT1G34550' => 'ath', 'AT1G53040' => 'ath', 'AT2G02910' => 'ath', 'AT4G09630' => 'ath', 'AT4G38500' => 'ath', 'AT5G42660' => 'ath', 'AT5G46220' => 'ath', 'ATR0152G026' => 'atr', 'ATR0564G343' => 'atr', 'ATR0706G151' => 'atr', 'ATR0733G207' => 'atr', 'ATR0751G234' => 'atr', 'ATR0807G048' => 'atr', 'ATR1091G084' => 'atr', 'Atru.chr10.1229' => 'acertr', 'Atru.chr10.1230' => 'acertr', 'Atru.chr10.1874' => 'acertr', 'Atru.chr11.1808' => 'acertr', 'Atru.chr13.1795' => 'acertr', 'Atru.chr13.570' => 'acertr', 'Atru.chr2.2608' => 'acertr', 'Atru.chr2.2609' => 'acertr', 'Atru.chr5.3428' => 'acertr', 'Atru.chr8.1171' => 'acertr', 'AUR62004651' => 'cqu', 'AUR62008675' => 'cqu', 'AUR62010014' => 'cqu', 'AUR62013004' => 'cqu', 'AUR62014825' => 'cqu', 'AUR62015015' => 'cqu', 'AUR62015151' => 'cqu', 'AUR62017020' => 'cqu', 'AUR62019422' => 'cqu', 'AUR62023570' => 'cqu', 'AUR62025571' => 'cqu', 'AUR62029098' => 'cqu', 'AUR62033863' => 'cqu', 'AUR62034296' => 'cqu', 'AUR62040075' => 'cqu', 'BcaB02g07334' => 'bca', 'BcaB02g10575' => 'bca', 'BcaB03g12119' => 'bca', 'BcaB03g12120' => 'bca', 'BcaB03g13945' => 'bca', 'BcaB04g17123' => 'bca', 'BcaB04g17867' => 'bca', 'BcaB04g19839' => 'bca', 'BcaB07g30317' => 'bca', 'BcaB07g32432' => 'bca', 'BcaB07g33362' => 'bca', 'BcaB08g36611' => 'bca', 'BcaC01g00028' => 'bca', 'BcaC01g01356' => 'bca', 'BcaC01g02034' => 'bca', 'BcaC01g06051' => 'bca', 'BcaC03g16839' => 'bca', 'BcaC03g17176' => 'bca', 'BcaC05g26829' => 'bca', 'BcaC06g31490' => 'bca', 'BcaC06g35344' => 'bca', 'BcaC06g36570' => 'bca', 'BcaC07g37537' => 'bca', 'BcaC08g43491' => 'bca', 'BcaC08g43773' => 'bca', 'BcaNung00234' => 'bca', 'BcaNung01982' => 'bca', 'BcaNung03707' => 'bca', 'BcaNung06454' => 'bca', 'BolC2t10762H' => 'bol', 'BolC2t11191H' => 'bol', 'BolC3t14322H' => 'bol', 'BolC3t19747H' => 'bol', 'BolC3t21425H' => 'bol', 'BolC4t27800H' => 'bol', 'BolC5t31423H' => 'bol', 'BolC6t35951H' => 'bol', 'BolC6t36282H' => 'bol', 'BolC7t40678H' => 'bol', 'BolC7t40679H' => 'bol', 'BolC7t42222H' => 'bol', 'BolC7t43492H' => 'bol', 'BolC7t46785H' => 'bol', 'BolC8t47853H' => 'bol', 'BolC9t56805H' => 'bol', 'BraA02t08000Z' => 'bra', 'BraA02t08341Z' => 'bra', 'BraA03t10936Z' => 'bra', 'BraA03t15657Z' => 'bra', 'BraA04t18100Z' => 'bra', 'BraA05t20523Z' => 'bra', 'BraA06t23353Z' => 'bra', 'BraA06t27473Z' => 'bra', 'BraA06t27769Z' => 'bra', 'BraA07t28928Z' => 'bra', 'BraA08t32236Z' => 'bra', 'BraA08t32841Z' => 'bra', 'BraA08t34524Z' => 'bra', 'BraA09t38742Z' => 'bra', 'BraA09t39295Z' => 'bra', 'C02p47180' => 'bna', 'C02p50990' => 'bna', 'C03p19360' => 'bna', 'C03p74950' => 'bna', 'C03p91000' => 'bna', 'C04p63260' => 'bna', 'C05p27050' => 'bna', 'C06p08750' => 'bna', 'C06p11490' => 'bna', 'C07p02820' => 'bna', 'C07p17180' => 'bna', 'C07p29440' => 'bna', 'C07p63730' => 'bna', 'C09p39260' => 'bna', 'CAN.G1164.34' => 'can', 'CAN.G1164.39' => 'can', 'CAN.G1530.3' => 'can', 'CAN.G162.61' => 'can', 'CAN.G176.6' => 'can', 'CAN.G289.49' => 'can', 'CAN.G370.21' => 'can', 'CAN.G370.22' => 'can', 'CAN.G371.117' => 'can', 'CAN.G58.37' => 'can', 'CAN.G588.98' => 'can', 'CANSAT21G2266' => 'cansat', 'CANSAT25G2799' => 'cansat', 'CANSAT35G0862' => 'cansat', 'CANSAT35G1704' => 'cansat', 'CANSAT35G1760' => 'cansat', 'CANSAT56G3971' => 'cansat', 'CANSAT56G4116' => 'cansat', 'CANSAT80G1259' => 'cansat', 'CARHR027730' => 'chi', 'CARHR033880' => 'chi', 'CARHR043270' => 'chi', 'CARHR145330' => 'chi', 'CARHR145340' => 'chi', 'CARHR175570' => 'chi', 'CARHR181570' => 'chi', 'CARHR258470' => 'chi', 'CARHR260490' => 'chi', 'CARHR294220' => 'chi', 'Carub.0001s2668' => 'cru', 'Carub.0001s3257' => 'cru', 'Carub.0001s4220' => 'cru', 'Carub.0005s0179' => 'cru', 'Carub.0006s2807' => 'cru', 'Carub.0007s0039' => 'cru', 'Carub.0008s0169' => 'cru', 'Carub.0008s0636' => 'cru', 'Ca_00338_v3' => 'car', 'Ca_00542_v3' => 'car', 'Ca_01844_v3' => 'car', 'Ca_10611_v3' => 'car', 'Ca_13326_v3' => 'car', 'Ca_17944_v3' => 'car', 'Ca_18546_v3' => 'car', 'Ca_24219_v3' => 'car', 'Ca_29972_v3' => 'car', 'CBR_g3681' => 'cbr', 'CBR_g40021' => 'cbr', 'Cc01_g08140' => 'ccan', 'Cc02_g13410' => 'ccan', 'Cc02_g37480' => 'ccan', 'Cc05_g12030' => 'ccan', 'Cc09_g03370' => 'ccan', 'Cc09_g10300' => 'ccan', 'Cc10_g03530' => 'ccan', 'Cc10_g11380' => 'ccan', 'CDE01G0176' => 'cde', 'CDE02G0675' => 'cde', 'CDE02G0942' => 'cde', 'CDE02G1153' => 'cde', 'CDE02G4177' => 'cde', 'CDE04G2117' => 'cde', 'CDE04G2736' => 'cde', 'CDE08G1161' => 'cde', 'CDE09G1238' => 'cde', 'Cfa000467' => 'cfa', 'Cfa000947' => 'cfa', 'Cfa004969' => 'cfa', 'Cfa005284' => 'cfa', 'Cfa008993' => 'cfa', 'Cfa018187' => 'cfa', 'Cfa018454' => 'cfa', 'Cfa020585' => 'cfa', 'Ciclev10000424m.g' => 'ccl', 'Ciclev10003605m.g' => 'ccl', 'Ciclev10007828m.g' => 'ccl', 'Ciclev10014620m.g' => 'ccl', 'Ciclev10015169m.g' => 'ccl', 'Ciclev10018291m.g' => 'ccl', 'Ciclev10028256m.g' => 'ccl', 'Ciclev10033822m.g' => 'ccl', 'CiPaw.05G060300' => 'cil', 'CiPaw.05G085000' => 'cil', 'CiPaw.06G083700' => 'cil', 'CiPaw.06G120300' => 'cil', 'CiPaw.09G060500' => 'cil', 'CiPaw.09G123800' => 'cil', 'CiPaw.11G169700' => 'cil', 'CiPaw.12G118300' => 'cil', 'CiPaw.15G071000' => 'cil', 'CiPaw.15G081900' => 'cil', 'ClCG01G024610' => 'cla', 'ClCG03G006070' => 'cla', 'ClCG05G019250' => 'cla', 'ClCG09G009500' => 'cla', 'ClCG11G008200' => 'cla', 'ClCG11G018080' => 'cla', 'COL.COLO4_17373' => 'col', 'COL.COLO4_22994' => 'col', 'COL.COLO4_26389' => 'col', 'COL.COLO4_27170' => 'col', 'COL.COLO4_31074' => 'col', 'COL.COLO4_31465' => 'col', 'COL.COLO4_36438' => 'col', 'COL.COLO4_36439' => 'col', 'Cpa.g.c38781' => 'cpa', 'Cpa.g.sc128.12' => 'cpa', 'Cpa.g.sc166.7' => 'cpa', 'Cpa.g.sc166.8' => 'cpa', 'Cpa.g.sc20.111' => 'cpa', 'Cpa.g.sc27.31' => 'cpa', 'Cpa.g.sc64.36' => 'cpa', 'Cpa.g.sc64.37' => 'cpa', 'Cpa.g.sc66.49' => 'cpa', 'Cpa.g.sc80.64' => 'cpa', 'CsaV3_1G012320' => 'csa', 'CsaV3_2G008480' => 'csa', 'CsaV3_2G033450' => 'csa', 'CsaV3_3G044830' => 'csa', 'CsaV3_4G033710' => 'csa', 'CsaV3_6G051730' => 'csa', 'CsaV3_7G025350' => 'csa', 'CSS0001067' => 'camsi', 'CSS0005996' => 'camsi', 'CSS0006590' => 'camsi', 'CSS0009673' => 'camsi', 'CSS0010201' => 'camsi', 'CSS0010549' => 'camsi', 'CSS0011364' => 'camsi', 'CSS0014473' => 'camsi', 'CSS0014961' => 'camsi', 'CSS0020191' => 'camsi', 'CSS0021165' => 'camsi', 'CSS0022306' => 'camsi', 'CSS0030591' => 'camsi', 'CSS0030696' => 'camsi', 'CSS0032653' => 'camsi', 'CSS0037487' => 'camsi', 'CSS0041102' => 'camsi', 'CSS0041261' => 'camsi', 'CSS0046246' => 'camsi', 'CSS0049256' => 'camsi', 'DCAR_004075' => 'dca', 'DCAR_011538' => 'dca', 'DCAR_019553' => 'dca', 'DCAR_020952' => 'dca', 'DCAR_021739' => 'dca', 'DCAR_027407' => 'dca', 'DCAR_027913' => 'dca', 'DCAR_028066' => 'dca', 'Dinv05899' => 'din', 'Dinv07563' => 'din', 'Dinv08010' => 'din', 'Dinv14125' => 'din', 'Dinv20172' => 'din', 'Dinv30743' => 'din', 'Dinv31229' => 'din', 'Dinv34162' => 'din', 'Dinv36028' => 'din', 'Dinv39368' => 'din', 'Dinv40565' => 'din', 'Dinv41706' => 'din', 'Duzib052G0089' => 'dzi', 'Duzib116G0641' => 'dzi', 'Duzib132G0069' => 'dzi', 'Duzib132G1219' => 'dzi', 'Duzib147G0278' => 'dzi', 'Duzib160G0480' => 'dzi', 'Duzib170G0661' => 'dzi', 'Duzib177G0591' => 'dzi', 'Duzib187G1353' => 'dzi', 'Duzib192G0858' => 'dzi', 'Duzib192G0883' => 'dzi', 'Duzib213G0506' => 'dzi', 'Duzib235G0289' => 'dzi', 'Duzib251G0422' => 'dzi', 'ECA232G3898' => 'eca', 'ECA233G5950' => 'eca', 'ECA234G1699' => 'eca', 'ECA234G2421' => 'eca', 'ECA236G0426' => 'eca', 'ECA236G4331' => 'eca', 'ECA248G2573' => 'eca', 'EL10Ac1g00077' => 'bvu', 'EL10Ac1g01746' => 'bvu', 'EL10Ac2g03464' => 'bvu', 'EL10Ac4g08176' => 'bvu', 'EL10Ac7g17521' => 'bvu', 'EL10Ac8g20386' => 'bvu', 'EL10Ac9g21343' => 'bvu', 'EL10Ac9g22688' => 'bvu', 'Eucgr.B03434' => 'egr', 'Eucgr.D00618' => 'egr', 'Eucgr.E02395' => 'egr', 'Eucgr.F01129' => 'egr', 'Eucgr.F02622' => 'egr', 'Eucgr.F04207' => 'egr', 'FAN01G0570' => 'fan', 'FAN03G3351' => 'fan', 'FAN06G3702' => 'fan', 'FAN07G2149' => 'fan', 'FAN10G3758' => 'fan', 'FAN11G1170' => 'fan', 'FAN11G2050' => 'fan', 'FAN11G2724' => 'fan', 'FAN12G1700' => 'fan', 'FAN12G2028' => 'fan', 'FAN15G1160' => 'fan', 'FAN15G3063' => 'fan', 'FAN16G2540' => 'fan', 'FAN16G3077' => 'fan', 'FAN16G3624' => 'fan', 'FAN17G0221' => 'fan', 'FAN20G2492' => 'fan', 'FAN20G2905' => 'fan', 'FAN21G0548' => 'fan', 'FAN21G1300' => 'fan', 'FAN22G0077' => 'fan', 'FAN22G1315' => 'fan', 'FAN24G1280' => 'fan', 'FAN24G1445' => 'fan', 'FAN24G3527' => 'fan', 'FAN25G0464' => 'fan', 'FAN25G2885' => 'fan', 'FAN25G3270' => 'fan', 'FAN27G1101' => 'fan', 'FAN27G2846' => 'fan', 'FAN27G3524' => 'fan', 'FvH4_2g11770' => 'fve', 'FvH4_2g15630' => 'fve', 'FvH4_3g05570' => 'fve', 'FvH4_3g09110' => 'fve', 'FvH4_3g19940' => 'fve', 'FvH4_4g04821' => 'fve', 'FvH4_4g31480' => 'fve', 'FvH4_7g01740' => 'fve', 'Glyma.05G130400' => 'gma', 'Glyma.05G156400' => 'gma', 'Glyma.07G197000' => 'gma', 'Glyma.08G085151' => 'gma', 'Glyma.08G114500' => 'gma', 'Glyma.08G300400' => 'gma', 'Glyma.10G215800' => 'gma', 'Glyma.12G224400' => 'gma', 'Glyma.13G179300' => 'gma', 'Glyma.13G218151' => 'gma', 'Glyma.13G238800' => 'gma', 'Glyma.13G276900' => 'gma', 'Glyma.14G078200' => 'gma', 'Glyma.15G074500' => 'gma', 'Glyma.15G094100' => 'gma', 'Glyma.17G247200' => 'gma', 'Glyma.18G120100' => 'gma', 'Glyma.20G176000' => 'gma', 'Gohir.A01G063600' => 'ghi', 'Gohir.A01G170301' => 'ghi', 'Gohir.A02G060500' => 'ghi', 'Gohir.A05G133850' => 'ghi', 'Gohir.A05G161400' => 'ghi', 'Gohir.A06G012900' => 'ghi', 'Gohir.A06G035901' => 'ghi', 'Gohir.A06G127100' => 'ghi', 'Gohir.A06G210500' => 'ghi', 'Gohir.A08G008650' => 'ghi', 'Gohir.A09G072700' => 'ghi', 'Gohir.A09G088301' => 'ghi', 'Gohir.A10G040600' => 'ghi', 'Gohir.A12G036300' => 'ghi', 'Gohir.A12G143350' => 'ghi', 'Gohir.A12G165500' => 'ghi', 'Gohir.A13G145700' => 'ghi', 'Gohir.D01G050000' => 'ghi', 'Gohir.D01G051366' => 'ghi', 'Gohir.D01G161350' => 'ghi', 'Gohir.D02G065900' => 'ghi', 'Gohir.D05G164200' => 'ghi', 'Gohir.D05G355500' => 'ghi', 'Gohir.D06G010400' => 'ghi', 'Gohir.D06G111250' => 'ghi', 'Gohir.D06G132000' => 'ghi', 'Gohir.D06G210500' => 'ghi', 'Gohir.D07G165675' => 'ghi', 'Gohir.D08G062240' => 'ghi', 'Gohir.D08G086101' => 'ghi', 'Gohir.D08G138060' => 'ghi', 'Gohir.D09G072300' => 'ghi', 'Gohir.D10G041400' => 'ghi', 'Gohir.D11G191020' => 'ghi', 'Gohir.D11G212066' => 'ghi', 'Gohir.D12G036300' => 'ghi', 'Gohir.D12G168600' => 'ghi', 'Gohir.D13G150600' => 'ghi', 'Gorai.001G057300' => 'gra', 'Gorai.002G069900' => 'gra', 'Gorai.002G200000' => 'gra', 'Gorai.003G067600' => 'gra', 'Gorai.005G074800' => 'gra', 'Gorai.006G087300' => 'gra', 'Gorai.008G037500' => 'gra', 'Gorai.008G181400' => 'gra', 'Gorai.009G169400' => 'gra', 'Gorai.009G387900' => 'gra', 'Gorai.010G013300' => 'gra', 'Gorai.010G153800' => 'gra', 'Gorai.010G255800' => 'gra', 'Gorai.011G043700' => 'gra', 'Gorai.011G198900' => 'gra', 'Gorai.013G168400' => 'gra', 'GSVIVG01005212001' => 'vvi', 'GSVIVG01006163001' => 'vvi', 'GSVIVG01009625001' => 'vvi', 'GSVIVG01014338001' => 'vvi', 'GSVIVG01020005001' => 'vvi', 'GSVIVG01021450001' => 'vvi', 'GSVIVG01023975001' => 'vvi', 'GSVIVG01034490001' => 'vvi', 'HanXRQChr04g0112071' => 'han', 'HanXRQChr05g0131151' => 'han', 'HanXRQChr09g0262371' => 'han', 'HanXRQChr09g0268401' => 'han', 'HanXRQChr10g0279241' => 'han', 'HanXRQChr10g0297961' => 'han', 'HanXRQChr11g0326231' => 'han', 'HanXRQChr11g0328471' => 'han', 'HanXRQChr16g0507941' => 'han', 'HanXRQChr17g0560211' => 'han', 'Haze_02108' => 'cav', 'Haze_02428' => 'cav', 'Haze_05593' => 'cav', 'Haze_06448' => 'cav', 'Haze_09427' => 'cav', 'Haze_12022' => 'cav', 'Haze_17612' => 'cav', 'Haze_17928' => 'cav', 'Hma1.2p1_0032F.1_g019250' => 'hma', 'Hma1.2p1_0163F.1_g072690' => 'hma', 'Hma1.2p1_0265F.1_g106710' => 'hma', 'Hma1.2p1_0286F.1_g113970' => 'hma', 'Hma1.2p1_0363F.1_g136640' => 'hma', 'Hma1.2p1_0584F.1_g183470' => 'hma', 'Hma1.2p1_0885F.1_g232570' => 'hma', 'HPP92_006022' => 'vpl', 'HPP92_007320' => 'vpl', 'HPP92_011521' => 'vpl', 'HPP92_019387' => 'vpl', 'HPP92_024038' => 'vpl', 'Hund05891' => 'sun', 'Hund06450' => 'sun', 'Hund12053' => 'sun', 'Hund16800' => 'sun', 'Hund21222' => 'sun', 'Hund22896' => 'sun', 'Hund23746' => 'sun', 'Hund27083' => 'sun', 'Lalb_Chr02g0141831' => 'lal', 'Lalb_Chr02g0141841' => 'lal', 'Lalb_Chr05g0220411' => 'lal', 'Lalb_Chr06g0162081' => 'lal', 'Lalb_Chr09g0327651' => 'lal', 'Lalb_Chr13g0295051' => 'lal', 'Lalb_Chr15g0086801' => 'lal', 'Lalb_Chr16g0383781' => 'lal', 'Lalb_Chr16g0383791' => 'lal', 'Lalb_Chr18g0055441' => 'lal', 'Lalb_Chr18g0059611' => 'lal', 'Lalb_Chr20g0109661' => 'lal', 'Lalb_Chr20g0109831' => 'lal', 'Lalb_Chr20g0121871' => 'lal', 'Lalb_Chr22g0355361' => 'lal', 'Lalb_Chr25g0286371' => 'lal', 'Lj1A1187G43' => 'lonja', 'Lj1A1205T50' => 'lonja', 'Lj1A800G33' => 'lonja', 'Lj1C1187T7' => 'lonja', 'Lj1C843T11' => 'lonja', 'Lj1g0010940' => 'lja', 'Lj2A288T69' => 'lonja', 'Lj3g0024276' => 'lja', 'Lj4A47T76' => 'lonja', 'Lj4g0005805' => 'lja', 'Lj4g0006097' => 'lja', 'Lj4g0008528' => 'lja', 'Lj4g0024907' => 'lja', 'Lj5g0012472' => 'lja', 'Lj5g0018648' => 'lja', 'Lj6C789G1' => 'lonja', 'Lj6g0004000' => 'lja', 'Lj7A292G67' => 'lonja', 'Lj7A292T64' => 'lonja', 'Lj9A400T58' => 'lonja', 'Lsat_1_v5_gn_1_126181' => 'lsa', 'Lsat_1_v5_gn_4_123041' => 'lsa', 'Lsat_1_v5_gn_4_133620' => 'lsa', 'Lsat_1_v5_gn_4_53221' => 'lsa', 'Lsat_1_v5_gn_4_71961' => 'lsa', 'Lsat_1_v5_gn_7_105241' => 'lsa', 'Lsat_1_v5_gn_7_21361' => 'lsa', 'Lsat_1_v5_gn_7_28860' => 'lsa', 'Lsat_1_v5_gn_7_31260' => 'lsa', 'Lsat_1_v5_gn_8_52801' => 'lsa', 'Manes.02G191400' => 'mes', 'Manes.03G110100' => 'mes', 'Manes.04G071100' => 'mes', 'Manes.05G100500' => 'mes', 'Manes.05G164700' => 'mes', 'Manes.15G087000' => 'mes', 'Manes.15G121500' => 'mes', 'Manes.16G028300' => 'mes', 'Manes.17G046100' => 'mes', 'Manes.17G069800' => 'mes', 'Manes.18G100500' => 'mes', 'Mapoly0002s0109' => 'mpo', 'Mapoly0024s0007' => 'mpo', 'Mapoly0089s0032' => 'mpo', 'MBI04_g42241_MAGBIO' => 'mbi', 'MBI05_g11988_MAGBIO' => 'mbi', 'MBI05_g35452_MAGBIO' => 'mbi', 'MBI07_g30179_MAGBIO' => 'mbi', 'MBI07_g35859_MAGBIO' => 'mbi', 'MBI07_g35860_MAGBIO' => 'mbi', 'MBI07_g37166_MAGBIO' => 'mbi', 'MBI08_g18172_MAGBIO' => 'mbi', 'MBI09_g08441_MAGBIO' => 'mbi', 'MBI13_g01676_MAGBIO' => 'mbi', 'MBI14_g42955_MAGBIO' => 'mbi', 'MBI16_g13161_MAGBIO' => 'mbi', 'MBI17_g27204_MAGBIO' => 'mbi', 'MBI19_g21595_MAGBIO' => 'mbi', 'MD00G1148400' => 'mdo', 'MD02G1301200' => 'mdo', 'MD03G1227800' => 'mdo', 'MD05G1041100' => 'mdo', 'MD05G1124800' => 'mdo', 'MD05G1284000' => 'mdo', 'MD05G1338800' => 'mdo', 'MD05G1338900' => 'mdo', 'MD07G1022800' => 'mdo', 'MD10G1047500' => 'mdo', 'MD10G1127500' => 'mdo', 'MD10G1262300' => 'mdo', 'MD10G1293800' => 'mdo', 'MD16G1074300' => 'mdo', 'Medtr1g021670' => 'mtr', 'Medtr1g096320' => 'mtr', 'Medtr2g013690' => 'mtr', 'Medtr2g019450' => 'mtr', 'Medtr2g085170' => 'mtr', 'Medtr4g088785' => 'mtr', 'Medtr8g055930' => 'mtr', 'Medtr8g085850' => 'mtr', 'MELO3C002605.2' => 'cme', 'MELO3C003891.2' => 'cme', 'MELO3C004012.2' => 'cme', 'MELO3C007134.2' => 'cme', 'MELO3C008118.2' => 'cme', 'MELO3C016700.2' => 'cme', 'MELO3C024127.2' => 'cme', 'MELO3C033361.2' => 'cme', 'MELO3C033362.2' => 'cme', 'Migut.C00430' => 'egut', 'Migut.C01246' => 'egut', 'Migut.E00101' => 'egut', 'Migut.H01486' => 'egut', 'Migut.H01939' => 'egut', 'Migut.K00360' => 'egut', 'Migut.M00910' => 'egut', 'Migut.M01139' => 'egut', 'Migut.N02677' => 'egut', 'MSTRG.13252' => 'ama', 'MSTRG.14701' => 'ama', 'MSTRG.1521' => 'ama', 'MSTRG.15884' => 'ama', 'MSTRG.16242' => 'ama', 'MSTRG.22285' => 'ama', 'MSTRG.22444' => 'ama', 'MSTRG.2349' => 'ama', 'MSTRG.26308' => 'ama', 'MSTRG.28296' => 'ama', 'MSTRG.9895' => 'ama', 'Nitab4.5_0000110g0060' => 'nta', 'Nitab4.5_0000420g0130' => 'nta', 'Nitab4.5_0000422g0030' => 'nta', 'Nitab4.5_0000560g0180' => 'nta', 'Nitab4.5_0000703g0100' => 'nta', 'Nitab4.5_0000786g0200' => 'nta', 'Nitab4.5_0001336g0020' => 'nta', 'Nitab4.5_0001796g0030' => 'nta', 'Nitab4.5_0003348g0060' => 'nta', 'Nitab4.5_0003698g0040' => 'nta', 'Nitab4.5_0003942g0090' => 'nta', 'Nitab4.5_0004775g0070' => 'nta', 'Nitab4.5_0004864g0030' => 'nta', 'Nitab4.5_0005615g0020' => 'nta', 'Nitab4.5_0009288g0030' => 'nta', 'Nitab4.5_0009341g0010' => 'nta', 'Nitab4.5_0009535g0010' => 'nta', 'Nn1g03995' => 'nnu', 'Nn1g04100' => 'nnu', 'Nn1g06530' => 'nnu', 'Nn3g16404' => 'nnu', 'Nn3g17212' => 'nnu', 'Nn3g20776' => 'nnu', 'Nn3g21923' => 'nnu', 'Nn5g27737' => 'nnu', 'Nn5g29461' => 'nnu', 'Nn7g38355' => 'nnu', 'Nn8g39873' => 'nnu', 'Oeu000548.2' => 'oeu', 'Oeu004672.1' => 'oeu', 'Oeu015605.2' => 'oeu', 'Oeu016092.1' => 'oeu', 'Oeu017879.3' => 'oeu', 'Oeu024910.1' => 'oeu', 'Oeu028965.1' => 'oeu', 'Oeu031269.1' => 'oeu', 'Oeu031270.1' => 'oeu', 'Oeu032535.1' => 'oeu', 'Oeu034151.1' => 'oeu', 'Oeu034152.1' => 'oeu', 'Oeu034588.2' => 'oeu', 'Oeu050846.1' => 'oeu', 'Oeu050849.2' => 'oeu', 'Oeu051063.2' => 'oeu', 'Oeu052368.1' => 'oeu', 'Oeu052370.1' => 'oeu', 'Os01g0210400' => 'osa', 'Os01g0304300' => 'osa', 'Os01g0749100' => 'osa', 'Os02g0745800' => 'osa', 'Os03g0769050' => 'osa', 'Os05g0531500' => 'osa', 'Os06g0724300' => 'osa', 'Os11g0198100' => 'osa', 'Peaxi162Scf00069g01425' => 'pax', 'Peaxi162Scf00280g00811' => 'pax', 'Peaxi162Scf00310g00615' => 'pax', 'Peaxi162Scf00362g00542' => 'pax', 'Peaxi162Scf00461g00310' => 'pax', 'Peaxi162Scf00530g00118' => 'pax', 'Peaxi162Scf00541g00057' => 'pax', 'Peaxi162Scf00661g00017' => 'pax', 'Peaxi162Scf00926g00027' => 'pax', 'Peaxi162Scf01064g00263' => 'pax', 'Peaxi162Scf01211g00135' => 'pax', 'PGR004G2336' => 'pgr', 'PGR042G0327' => 'pgr', 'PGR042G1957' => 'pgr', 'PGR042G2003' => 'pgr', 'PGR042G3929' => 'pgr', 'PGR083G1137' => 'pgr', 'PGR083G1364' => 'pgr', 'PGSC0003DMG400003381' => 'stu', 'PGSC0003DMG400003417' => 'stu', 'PGSC0003DMG400008981' => 'stu', 'PGSC0003DMG400012417' => 'stu', 'PGSC0003DMG400012823' => 'stu', 'PGSC0003DMG400016885' => 'stu', 'PGSC0003DMG400022812' => 'stu', 'PGSC0003DMG400029726' => 'stu', 'PGSC0003DMG401009243' => 'stu', 'PGSC0003DMG401031505' => 'stu', 'PGSC0003DMG402031505' => 'stu', 'Phvul.001G017600' => 'pvu', 'Phvul.002G193500' => 'pvu', 'Phvul.002G228900' => 'pvu', 'Phvul.002G236800' => 'pvu', 'Phvul.003G049500' => 'pvu', 'Phvul.005G072000' => 'pvu', 'Phvul.006G164800' => 'pvu', 'Phvul.006G185100' => 'pvu', 'Phvul.007G090000' => 'pvu', 'Potri.001G399800' => 'ptr', 'Potri.002G149900' => 'ptr', 'Potri.004G044100' => 'ptr', 'Potri.004G177600' => 'ptr', 'Potri.009G138000' => 'ptr', 'Potri.010G094000' => 'ptr', 'Potri.011G053000' => 'ptr', 'Potri.011G119300' => 'ptr', 'Potri.013G113700' => 'ptr', 'Potri.018G107800' => 'ptr', 'Potri.019G084100' => 'ptr', 'Pp3c14_23720' => 'ppa', 'Pp3c16_6340' => 'ppa', 'Pp3c23_13420' => 'ppa', 'Pp3c24_2740' => 'ppa', 'Pp3c25_860' => 'ppa', 'Pp3c8_21750' => 'ppa', 'Prupe.1G273000' => 'ppe', 'Prupe.1G273700' => 'ppe', 'Prupe.1G274100' => 'ppe', 'Prupe.2G023300' => 'ppe', 'Prupe.4G048000' => 'ppe', 'Prupe.4G080400' => 'ppe', 'Prupe.4G181200' => 'ppe', 'Prupe.8G056900' => 'ppe', 'Prupe.8G168700' => 'ppe', 'Psat1g189080' => 'psa', 'Psat1g204760' => 'psa', 'Psat4g175560' => 'psa', 'Psat4g177720' => 'psa', 'Psat5g244240' => 'psa', 'Psat6g010720' => 'psa', 'Psat6g187200' => 'psa', 'Psat7g072040' => 'psa', 'PSO017G3501' => 'pso', 'PSO063G2148' => 'pso', 'PSO063G5608' => 'pso', 'PSO210G6392' => 'pso', 'PSO541G2319' => 'pso', 'PSO541G2836' => 'pso', 'PSO541G4012' => 'pso', 'PSO541G6253' => 'pso', 'PSO675G0580' => 'pso', 'PSO675G0856' => 'pso', 'PSO675G5635' => 'pso', 'PSO675G9157' => 'pso', 'PSO832G1660' => 'pso', 'PSO832G1969' => 'pso', 'QL02p007186' => 'qlo', 'QL02p033904' => 'qlo', 'QL03p064391' => 'qlo', 'QL05p040593' => 'qlo', 'QL05p058242' => 'qlo', 'QL08p021825' => 'qlo', 'QL11p004981' => 'qlo', 'RcHm_v2.0_Chr1g0318301' => 'rch', 'RcHm_v2.0_Chr4g0418501' => 'rch', 'RcHm_v2.0_Chr4g0439971' => 'rch', 'RcHm_v2.0_Chr5g0008541' => 'rch', 'RcHm_v2.0_Chr5g0014101' => 'rch', 'RcHm_v2.0_Chr5g0014131' => 'rch', 'RcHm_v2.0_Chr5g0033621' => 'rch', 'RcHm_v2.0_Chr6g0272041' => 'rch', 'RcHm_v2.0_Chr6g0278831' => 'rch', 'Rhsim02G0130400' => 'rsi', 'Rhsim02G0171100' => 'rsi', 'Rhsim05G0053000' => 'rsi', 'Rhsim05G0053100' => 'rsi', 'Rhsim06G0096500' => 'rsi', 'Rhsim06G0096600' => 'rsi', 'Rhsim06G0199100' => 'rsi', 'Rhsim12G0062300' => 'rsi', 'Rhsim12G0062800' => 'rsi', 'Sabra02G0118600' => 'sbr', 'Sabra04G0027300' => 'sbr', 'Sabra04G0119500' => 'sbr', 'Sabra08G0112500' => 'sbr', 'Sabra11G0036800' => 'sbr', 'Sabra11G0103800' => 'sbr', 'Sabra13G0096300' => 'sbr', 'Sabra16G0262300' => 'sbr', 'Sabra18G0091700' => 'sbr', 'Sabra19G0095400' => 'sbr', 'SalBow6G3080' => 'sbo', 'SalBow7G1157' => 'sbo', 'SalBow7G2123' => 'sbo', 'SalBow7G2285' => 'sbo', 'SalBow7G3537' => 'sbo', 'SalBow8G2947' => 'sbo', 'SalBow8G4463' => 'sbo', 'SalBow8G5466' => 'sbo', 'Sc01g0001750' => 'sci', 'Sc02g0006640' => 'sci', 'Sc02g0006670' => 'sci', 'Sc04g0008220' => 'sci', 'Sc05g0006190' => 'sci', 'Sc08g0002760' => 'sci', 'Sc17g0006170' => 'sci', 'Sc22g0002050' => 'sci', 'Sc23g0001190' => 'sci', 'Sc24g0000980' => 'sci', 'Sed0006245' => 'sed', 'Sed0007543' => 'sed', 'Sed0009411' => 'sed', 'Sed0010765' => 'sed', 'Sed0012944' => 'sed', 'Sed0014682' => 'sed', 'Sed0016174' => 'sed', 'Sed0016796' => 'sed', 'Sed0020317' => 'sed', 'Sed0021467' => 'sed', 'SEGI_01316' => 'sgi', 'SEGI_03374' => 'sgi', 'SEGI_16265' => 'sgi', 'SEGI_18569' => 'sgi', 'SEGI_20351' => 'sgi', 'SEGI_26395' => 'sgi', 'SEGI_29469' => 'sgi', 'SEGI_34771' => 'sgi', 'SEGI_36769' => 'sgi', 'SEGI_37139' => 'sgi', 'SGA_v2.0_scaffold100G29687' => 'sas', 'SGA_v2.0_scaffold118G32472' => 'sas', 'SGA_v2.0_scaffold14G07051' => 'sas', 'SGA_v2.0_scaffold183G39845' => 'sas', 'SGA_v2.0_scaffold1G00174' => 'sas', 'SGA_v2.0_scaffold22G09714' => 'sas', 'SGA_v2.0_scaffold333G48992' => 'sas', 'SGA_v2.0_scaffold46G17491' => 'sas', 'SGA_v2.0_scaffold49G18294' => 'sas', 'SGA_v2.0_scaffold63G21658' => 'sas', 'SHI01741' => 'shi', 'SHI05771' => 'shi', 'SHI18077' => 'shi', 'SHI20525' => 'shi', 'SHI20527' => 'shi', 'SHI20528' => 'shi', 'SMO172G0185' => 'smo', 'SMO198G0020' => 'smo', 'SMO351G0006' => 'smo', 'SMO356G0118' => 'smo', 'SMO358G0296' => 'smo', 'SMO367G0079' => 'smo', 'SMO367G1277' => 'smo', 'Solyc01g014220.3' => 'sly', 'Solyc01g111770.2' => 'sly', 'Solyc02g078180.3' => 'sly', 'Solyc03g006430.3' => 'sly', 'Solyc03g006456.1' => 'sly', 'Solyc03g079860.2' => 'sly', 'Solyc04g079770.3' => 'sly', 'Solyc05g007430.4' => 'sly', 'Solyc07g063150.3' => 'sly', 'Solyc08g016620.3' => 'sly', 'Solyc09g057590.3' => 'sly', 'Solyc09g057600.1' => 'sly', 'Solyc10g009050.3' => 'sly', 'Solyc11g017420.2' => 'sly', 'Sopen01g053810' => 'spe', 'Sopen02g023040' => 'spe', 'Sopen03g002440' => 'spe', 'Sopen04g033350' => 'spe', 'Sopen05g003310' => 'spe', 'Sopen07g004050' => 'spe', 'Sopen07g031340' => 'spe', 'Sopen08g006990' => 'spe', 'Sopen10g004830' => 'spe', 'Sopen11g009370' => 'spe', 'Sp1g24450' => 'spa', 'Sp1g29670' => 'spa', 'Sp1g39600' => 'spa', 'Sp2g11080' => 'spa', 'Sp2g13970' => 'spa', 'Sp4g16130' => 'spa', 'Sp6g13080' => 'spa', 'Sp7g37270' => 'spa', 'TAR371G0065' => 'tar', 'TAR376G0340' => 'tar', 'TAR376G0435' => 'tar', 'TAR381G0002' => 'tar', 'TAR381G1236' => 'tar', 'TAR624G0055' => 'tar', 'TAR624G0324' => 'tar', 'TAR624G0696' => 'tar', 'TAR624G0906' => 'tar', 'TAR625G0107' => 'tar', 'TAR626G0015' => 'tar', 'TAR626G1356' => 'tar', 'TAR627G0888' => 'tar', 'TAR628G0399' => 'tar', 'TAR628G1327' => 'tar', 'TAR629G2831' => 'tar', 'TAR629G2874' => 'tar', 'TAR633G1432' => 'tar', 'TAR633G2771' => 'tar', 'THA.LOC104803394' => 'tha', 'THA.LOC104805153' => 'tha', 'THA.LOC104806784' => 'tha', 'THA.LOC104810473' => 'tha', 'THA.LOC104813100' => 'tha', 'THA.LOC104814215' => 'tha', 'THA.LOC104815554' => 'tha', 'THA.LOC104820544' => 'tha', 'THA.LOC104824754' => 'tha', 'THA.LOC104827717' => 'tha', 'Thecc.02G031400' => 'tca', 'Thecc.02G055900' => 'tca', 'Thecc.02G350800' => 'tca', 'Thecc.06G150900' => 'tca', 'Thecc.06G186600' => 'tca', 'Thecc.07G089600' => 'tca', 'Thecc.08G020400' => 'tca', 'Thecc.08G182100' => 'tca', 'Thhalv10000873m.g' => 'esa', 'Thhalv10004185m.g' => 'esa', 'Thhalv10006981m.g' => 'esa', 'Thhalv10007204m.g' => 'esa', 'Thhalv10011374m.g' => 'esa', 'Thhalv10013482m.g' => 'esa', 'Thhalv10017801m.g' => 'esa', 'Thhalv10024983m.g' => 'esa', 'TPR.G12072' => 'tpr', 'TPR.G15769' => 'tpr', 'TPR.G16504' => 'tpr', 'TPR.G16506' => 'tpr', 'TPR.G24345' => 'tpr', 'TPR.G26666' => 'tpr', 'TPR.G27320' => 'tpr', 'TPR.G31819' => 'tpr', 'TPR.G38879' => 'tpr', 'TPR.G39015' => 'tpr', 'TPR.G8819' => 'tpr', 'TWI09G0924' => 'twi', 'TWI12G0811' => 'twi', 'TWI12G1294' => 'twi', 'TWI31G0150' => 'twi', 'TWI36G1262' => 'twi', 'TWI38G1287' => 'twi', 'TWI38G1633' => 'twi', 'TWI38G1982' => 'twi', 'TWI39G0116' => 'twi', 'TWI60G1011' => 'twi', 'TWI63G0171' => 'twi', 'TWI73G0839' => 'twi', 'TWI79G1511' => 'twi', 'unitig_0.g915' => 'ugi', 'unitig_0.g916' => 'ugi', 'unitig_21.g20219' => 'ugi', 'unitig_21.g20416' => 'ugi', 'unitig_578.g16132' => 'ugi', 'unitig_578.g16718' => 'ugi', 'unitig_62.g23481' => 'ugi', 'unitig_744.g24535' => 'ugi', 'unitig_749.g13525' => 'ugi', 'vmacro01248' => 'vma', 'vmacro02290' => 'vma', 'vmacro10946' => 'vma', 'vmacro11865' => 'vma', 'vmacro12493' => 'vma', 'vmacro17322' => 'vma', 'vmacro21599' => 'vma', 'vmacro23041' => 'vma', 'VMungo0251G0004' => 'vmu', 'VMungo0251G2639' => 'vmu', 'VMungo0251G2967' => 'vmu', 'VMungo0540G0864' => 'vmu', 'VMungo0540G1569' => 'vmu', 'VMungo0647G0317' => 'vmu', 'VMungo0720G1373' => 'vmu', 'VMungo0720G1508' => 'vmu', 'VMungo1080G0485' => 'vmu', 'VMungo1215G3177' => 'vmu', 'Zm00001eb112600' => 'zma', 'Zm00001eb120220' => 'zma', 'Zm00001eb153240' => 'zma', 'Zm00001eb168880' => 'zma', 'Zm00001eb213920' => 'zma', 'Zm00001eb228280' => 'zma', 'Zm00001eb254580' => 'zma', 'Zm00001eb272180' => 'zma', 'Zm00001eb293190' => 'zma', 'Zm00001eb322930' => 'zma', 'Zm00001eb353360' => 'zma', 'Zm00001eb353390' => 'zma', 'Zm00001eb353430' => 'zma', 'Zm00001eb353440' => 'zma', 'Zm00001eb353780' => 'zma' ), 'gf_id' => 'HOM05D000499', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000499' ), 'data_identifier' => 'HOM05D000499', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000499', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1066', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p29780' => 'bna', 'A02p33180' => 'bna', 'A03p16470' => 'bna', 'A03p66010' => 'bna', 'A04p25970' => 'bna', 'A06p01270' => 'bna', 'A06p46080' => 'bna', 'A07p11400' => 'bna', 'A08p01840' => 'bna', 'A08p08230' => 'bna', 'A08p25740' => 'bna', 'A09p32070' => 'bna', 'A09p37830' => 'bna', 'A09p42840' => 'bna', 'A09p42850' => 'bna', 'Aa31LG10G2060' => 'aar', 'Aa31LG2G7410' => 'aar', 'Aa31LG6G10200' => 'aar', 'Aa31LG6G16680' => 'aar', 'Aa31LG6G8470' => 'aar', 'Aa31LG9G12730' => 'aar', 'Aa31LG9G13680' => 'aar', 'Aa31LG9G14920' => 'aar', 'Aa31LG9G6650' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4977' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5467' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3254' => 'aag', 'Actinidia02578' => 'ach', 'Actinidia07693' => 'ach', 'Actinidia08413' => 'ach', 'Actinidia08414' => 'ach', 'Actinidia15289' => 'ach', 'Actinidia19871' => 'ach', 'Actinidia21475' => 'ach', 'Actinidia22576' => 'ach', 'Actinidia28327' => 'ach', 'Actinidia32491' => 'ach', 'Actinidia39463' => 'ach', 'Actinidia39571' => 'ach', 'Ah.01g013750' => 'amhyb', 'Ah.01g023210' => 'amhyb', 'Ah.04g164850' => 'amhyb', 'Ah.05g178060' => 'amhyb', 'Ah.07g204270' => 'amhyb', 'Ah.07g208480' => 'amhyb', 'Ah.09g237410' => 'amhyb', 'Ah.14g089460' => 'amhyb', 'AL1G41790' => 'aly', 'AL1G49050' => 'aly', 'AL1G53810' => 'aly', 'AL1G61400' => 'aly', 'AL4G18580' => 'aly', 'AL5G12510' => 'aly', 'AL5G12540' => 'aly', 'AL6G43230' => 'aly', 'AL7G10370' => 'aly', 'AL7G19250' => 'aly', 'AL8G12240' => 'aly', 'AL8G18540' => 'aly', 'Aqoxy1G02409' => 'aox', 'Aqoxy2G03993' => 'aox', 'Aqoxy3G03357' => 'aox', 'Aqoxy4G00785' => 'aox', 'Aqoxy5G02598' => 'aox', 'Aqoxy6G00132' => 'aox', 'Aqoxy7G01776' => 'aox', 'Aqoxy7G02316' => 'aox', 'Aqoxy7G03973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.12AFKW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B8730' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27IQR1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3F75VG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3RE0GA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41TCQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.527VTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FIR39' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5W8UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DA38EV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ63HS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H1I32C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HC27T5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4M8AP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7N3CZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9UVDZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LS1NQA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT1D4B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SKC4TM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCFV76' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF9Q1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQWD9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1ZM88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WE07RT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YCK7VH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJE6Q6' => 'arhy', 'AT1G28240' => 'ath', 'AT1G34550' => 'ath', 'AT1G53040' => 'ath', 'AT2G02910' => 'ath', 'AT4G09630' => 'ath', 'AT4G38500' => 'ath', 'AT5G42660' => 'ath', 'AT5G46220' => 'ath', 'ATR0152G026' => 'atr', 'ATR0564G343' => 'atr', 'ATR0706G151' => 'atr', 'ATR0733G207' => 'atr', 'ATR0751G234' => 'atr', 'ATR0807G048' => 'atr', 'ATR1091G084' => 'atr', 'Atru.chr10.1229' => 'acertr', 'Atru.chr10.1230' => 'acertr', 'Atru.chr10.1874' => 'acertr', 'Atru.chr11.1808' => 'acertr', 'Atru.chr13.1795' => 'acertr', 'Atru.chr13.570' => 'acertr', 'Atru.chr2.2608' => 'acertr', 'Atru.chr2.2609' => 'acertr', 'Atru.chr5.3428' => 'acertr', 'Atru.chr8.1171' => 'acertr', 'AUR62004651' => 'cqu', 'AUR62008675' => 'cqu', 'AUR62010014' => 'cqu', 'AUR62013004' => 'cqu', 'AUR62014825' => 'cqu', 'AUR62015015' => 'cqu', 'AUR62015151' => 'cqu', 'AUR62017020' => 'cqu', 'AUR62019422' => 'cqu', 'AUR62023570' => 'cqu', 'AUR62025571' => 'cqu', 'AUR62029098' => 'cqu', 'AUR62033863' => 'cqu', 'AUR62034296' => 'cqu', 'AUR62040075' => 'cqu', 'BcaB02g07334' => 'bca', 'BcaB02g10575' => 'bca', 'BcaB03g12119' => 'bca', 'BcaB03g12120' => 'bca', 'BcaB03g13945' => 'bca', 'BcaB04g17123' => 'bca', 'BcaB04g17867' => 'bca', 'BcaB04g19839' => 'bca', 'BcaB07g30317' => 'bca', 'BcaB07g32432' => 'bca', 'BcaB07g33362' => 'bca', 'BcaB08g36611' => 'bca', 'BcaC01g00028' => 'bca', 'BcaC01g01356' => 'bca', 'BcaC01g02034' => 'bca', 'BcaC01g06051' => 'bca', 'BcaC03g16839' => 'bca', 'BcaC03g17176' => 'bca', 'BcaC05g26829' => 'bca', 'BcaC06g31490' => 'bca', 'BcaC06g35344' => 'bca', 'BcaC06g36570' => 'bca', 'BcaC07g37537' => 'bca', 'BcaC08g43491' => 'bca', 'BcaC08g43773' => 'bca', 'BcaNung00234' => 'bca', 'BcaNung01982' => 'bca', 'BcaNung03707' => 'bca', 'BcaNung06454' => 'bca', 'BolC2t10762H' => 'bol', 'BolC2t11191H' => 'bol', 'BolC3t14322H' => 'bol', 'BolC3t19747H' => 'bol', 'BolC3t21425H' => 'bol', 'BolC4t27800H' => 'bol', 'BolC5t31423H' => 'bol', 'BolC6t35951H' => 'bol', 'BolC6t36282H' => 'bol', 'BolC7t40678H' => 'bol', 'BolC7t40679H' => 'bol', 'BolC7t42222H' => 'bol', 'BolC7t43492H' => 'bol', 'BolC7t46785H' => 'bol', 'BolC8t47853H' => 'bol', 'BolC9t56805H' => 'bol', 'BraA02t08000Z' => 'bra', 'BraA02t08341Z' => 'bra', 'BraA03t10936Z' => 'bra', 'BraA03t15657Z' => 'bra', 'BraA04t18100Z' => 'bra', 'BraA05t20523Z' => 'bra', 'BraA06t23353Z' => 'bra', 'BraA06t27473Z' => 'bra', 'BraA06t27769Z' => 'bra', 'BraA07t28928Z' => 'bra', 'BraA08t32236Z' => 'bra', 'BraA08t32841Z' => 'bra', 'BraA08t34524Z' => 'bra', 'BraA09t38742Z' => 'bra', 'BraA09t39295Z' => 'bra', 'C02p47180' => 'bna', 'C02p50990' => 'bna', 'C03p19360' => 'bna', 'C03p74950' => 'bna', 'C03p91000' => 'bna', 'C04p63260' => 'bna', 'C05p27050' => 'bna', 'C06p08750' => 'bna', 'C06p11490' => 'bna', 'C07p02820' => 'bna', 'C07p17180' => 'bna', 'C07p29440' => 'bna', 'C07p63730' => 'bna', 'C09p39260' => 'bna', 'CAN.G1164.34' => 'can', 'CAN.G1164.39' => 'can', 'CAN.G1530.3' => 'can', 'CAN.G162.61' => 'can', 'CAN.G176.6' => 'can', 'CAN.G289.49' => 'can', 'CAN.G370.21' => 'can', 'CAN.G370.22' => 'can', 'CAN.G371.117' => 'can', 'CAN.G58.37' => 'can', 'CAN.G588.98' => 'can', 'CANSAT21G2266' => 'cansat', 'CANSAT25G2799' => 'cansat', 'CANSAT35G0862' => 'cansat', 'CANSAT35G1704' => 'cansat', 'CANSAT35G1760' => 'cansat', 'CANSAT56G3971' => 'cansat', 'CANSAT56G4116' => 'cansat', 'CANSAT80G1259' => 'cansat', 'CARHR027730' => 'chi', 'CARHR033880' => 'chi', 'CARHR043270' => 'chi', 'CARHR145330' => 'chi', 'CARHR145340' => 'chi', 'CARHR175570' => 'chi', 'CARHR181570' => 'chi', 'CARHR258470' => 'chi', 'CARHR260490' => 'chi', 'CARHR294220' => 'chi', 'Carub.0001s2668' => 'cru', 'Carub.0001s3257' => 'cru', 'Carub.0001s4220' => 'cru', 'Carub.0005s0179' => 'cru', 'Carub.0006s2807' => 'cru', 'Carub.0007s0039' => 'cru', 'Carub.0008s0169' => 'cru', 'Carub.0008s0636' => 'cru', 'Ca_00338_v3' => 'car', 'Ca_00542_v3' => 'car', 'Ca_01844_v3' => 'car', 'Ca_10611_v3' => 'car', 'Ca_13326_v3' => 'car', 'Ca_17944_v3' => 'car', 'Ca_18546_v3' => 'car', 'Ca_24219_v3' => 'car', 'Ca_29972_v3' => 'car', 'CBR_g3681' => 'cbr', 'CBR_g40021' => 'cbr', 'Cc01_g08140' => 'ccan', 'Cc02_g13410' => 'ccan', 'Cc02_g37480' => 'ccan', 'Cc05_g12030' => 'ccan', 'Cc09_g03370' => 'ccan', 'Cc09_g10300' => 'ccan', 'Cc10_g03530' => 'ccan', 'Cc10_g11380' => 'ccan', 'CDE01G0176' => 'cde', 'CDE02G0675' => 'cde', 'CDE02G0942' => 'cde', 'CDE02G1153' => 'cde', 'CDE02G4177' => 'cde', 'CDE04G2117' => 'cde', 'CDE04G2736' => 'cde', 'CDE08G1161' => 'cde', 'CDE09G1238' => 'cde', 'Cfa000467' => 'cfa', 'Cfa000947' => 'cfa', 'Cfa004969' => 'cfa', 'Cfa005284' => 'cfa', 'Cfa008993' => 'cfa', 'Cfa018187' => 'cfa', 'Cfa018454' => 'cfa', 'Cfa020585' => 'cfa', 'Ciclev10000424m.g' => 'ccl', 'Ciclev10003605m.g' => 'ccl', 'Ciclev10007828m.g' => 'ccl', 'Ciclev10014620m.g' => 'ccl', 'Ciclev10015169m.g' => 'ccl', 'Ciclev10018291m.g' => 'ccl', 'Ciclev10028256m.g' => 'ccl', 'Ciclev10033822m.g' => 'ccl', 'CiPaw.05G060300' => 'cil', 'CiPaw.05G085000' => 'cil', 'CiPaw.06G083700' => 'cil', 'CiPaw.06G120300' => 'cil', 'CiPaw.09G060500' => 'cil', 'CiPaw.09G123800' => 'cil', 'CiPaw.11G169700' => 'cil', 'CiPaw.12G118300' => 'cil', 'CiPaw.15G071000' => 'cil', 'CiPaw.15G081900' => 'cil', 'ClCG01G024610' => 'cla', 'ClCG03G006070' => 'cla', 'ClCG05G019250' => 'cla', 'ClCG09G009500' => 'cla', 'ClCG11G008200' => 'cla', 'ClCG11G018080' => 'cla', 'COL.COLO4_17373' => 'col', 'COL.COLO4_22994' => 'col', 'COL.COLO4_26389' => 'col', 'COL.COLO4_27170' => 'col', 'COL.COLO4_31074' => 'col', 'COL.COLO4_31465' => 'col', 'COL.COLO4_36438' => 'col', 'COL.COLO4_36439' => 'col', 'Cpa.g.c38781' => 'cpa', 'Cpa.g.sc128.12' => 'cpa', 'Cpa.g.sc166.7' => 'cpa', 'Cpa.g.sc166.8' => 'cpa', 'Cpa.g.sc20.111' => 'cpa', 'Cpa.g.sc27.31' => 'cpa', 'Cpa.g.sc64.36' => 'cpa', 'Cpa.g.sc64.37' => 'cpa', 'Cpa.g.sc66.49' => 'cpa', 'Cpa.g.sc80.64' => 'cpa', 'CsaV3_1G012320' => 'csa', 'CsaV3_2G008480' => 'csa', 'CsaV3_2G033450' => 'csa', 'CsaV3_3G044830' => 'csa', 'CsaV3_4G033710' => 'csa', 'CsaV3_6G051730' => 'csa', 'CsaV3_7G025350' => 'csa', 'CSS0001067' => 'camsi', 'CSS0005996' => 'camsi', 'CSS0006590' => 'camsi', 'CSS0009673' => 'camsi', 'CSS0010201' => 'camsi', 'CSS0010549' => 'camsi', 'CSS0011364' => 'camsi', 'CSS0014473' => 'camsi', 'CSS0014961' => 'camsi', 'CSS0020191' => 'camsi', 'CSS0021165' => 'camsi', 'CSS0022306' => 'camsi', 'CSS0030591' => 'camsi', 'CSS0030696' => 'camsi', 'CSS0032653' => 'camsi', 'CSS0037487' => 'camsi', 'CSS0041102' => 'camsi', 'CSS0041261' => 'camsi', 'CSS0046246' => 'camsi', 'CSS0049256' => 'camsi', 'DCAR_004075' => 'dca', 'DCAR_011538' => 'dca', 'DCAR_019553' => 'dca', 'DCAR_020952' => 'dca', 'DCAR_021739' => 'dca', 'DCAR_027407' => 'dca', 'DCAR_027913' => 'dca', 'DCAR_028066' => 'dca', 'Dinv05899' => 'din', 'Dinv07563' => 'din', 'Dinv08010' => 'din', 'Dinv14125' => 'din', 'Dinv20172' => 'din', 'Dinv30743' => 'din', 'Dinv31229' => 'din', 'Dinv34162' => 'din', 'Dinv36028' => 'din', 'Dinv39368' => 'din', 'Dinv40565' => 'din', 'Dinv41706' => 'din', 'Duzib052G0089' => 'dzi', 'Duzib116G0641' => 'dzi', 'Duzib132G0069' => 'dzi', 'Duzib132G1219' => 'dzi', 'Duzib147G0278' => 'dzi', 'Duzib160G0480' => 'dzi', 'Duzib170G0661' => 'dzi', 'Duzib177G0591' => 'dzi', 'Duzib187G1353' => 'dzi', 'Duzib192G0858' => 'dzi', 'Duzib192G0883' => 'dzi', 'Duzib213G0506' => 'dzi', 'Duzib235G0289' => 'dzi', 'Duzib251G0422' => 'dzi', 'ECA232G3898' => 'eca', 'ECA233G5950' => 'eca', 'ECA234G1699' => 'eca', 'ECA234G2421' => 'eca', 'ECA236G0426' => 'eca', 'ECA236G4331' => 'eca', 'ECA248G2573' => 'eca', 'EL10Ac1g00077' => 'bvu', 'EL10Ac1g01746' => 'bvu', 'EL10Ac2g03464' => 'bvu', 'EL10Ac4g08176' => 'bvu', 'EL10Ac7g17521' => 'bvu', 'EL10Ac8g20386' => 'bvu', 'EL10Ac9g21343' => 'bvu', 'EL10Ac9g22688' => 'bvu', 'Eucgr.B03434' => 'egr', 'Eucgr.D00618' => 'egr', 'Eucgr.E02395' => 'egr', 'Eucgr.F01129' => 'egr', 'Eucgr.F02622' => 'egr', 'Eucgr.F04207' => 'egr', 'FAN01G0570' => 'fan', 'FAN03G3351' => 'fan', 'FAN06G3702' => 'fan', 'FAN07G2149' => 'fan', 'FAN10G3758' => 'fan', 'FAN11G1170' => 'fan', 'FAN11G2050' => 'fan', 'FAN11G2724' => 'fan', 'FAN12G1700' => 'fan', 'FAN12G2028' => 'fan', 'FAN15G1160' => 'fan', 'FAN15G3063' => 'fan', 'FAN16G2540' => 'fan', 'FAN16G3077' => 'fan', 'FAN16G3624' => 'fan', 'FAN17G0221' => 'fan', 'FAN20G2492' => 'fan', 'FAN20G2905' => 'fan', 'FAN21G0548' => 'fan', 'FAN21G1300' => 'fan', 'FAN22G0077' => 'fan', 'FAN22G1315' => 'fan', 'FAN24G1280' => 'fan', 'FAN24G1445' => 'fan', 'FAN24G3527' => 'fan', 'FAN25G0464' => 'fan', 'FAN25G2885' => 'fan', 'FAN25G3270' => 'fan', 'FAN27G1101' => 'fan', 'FAN27G2846' => 'fan', 'FAN27G3524' => 'fan', 'FvH4_2g11770' => 'fve', 'FvH4_2g15630' => 'fve', 'FvH4_3g05570' => 'fve', 'FvH4_3g09110' => 'fve', 'FvH4_3g19940' => 'fve', 'FvH4_4g04821' => 'fve', 'FvH4_4g31480' => 'fve', 'FvH4_7g01740' => 'fve', 'Glyma.05G130400' => 'gma', 'Glyma.05G156400' => 'gma', 'Glyma.07G197000' => 'gma', 'Glyma.08G085151' => 'gma', 'Glyma.08G114500' => 'gma', 'Glyma.08G300400' => 'gma', 'Glyma.10G215800' => 'gma', 'Glyma.12G224400' => 'gma', 'Glyma.13G179300' => 'gma', 'Glyma.13G218151' => 'gma', 'Glyma.13G238800' => 'gma', 'Glyma.13G276900' => 'gma', 'Glyma.14G078200' => 'gma', 'Glyma.15G074500' => 'gma', 'Glyma.15G094100' => 'gma', 'Glyma.17G247200' => 'gma', 'Glyma.18G120100' => 'gma', 'Glyma.20G176000' => 'gma', 'Gohir.A01G063600' => 'ghi', 'Gohir.A01G170301' => 'ghi', 'Gohir.A02G060500' => 'ghi', 'Gohir.A05G133850' => 'ghi', 'Gohir.A05G161400' => 'ghi', 'Gohir.A06G012900' => 'ghi', 'Gohir.A06G035901' => 'ghi', 'Gohir.A06G127100' => 'ghi', 'Gohir.A06G210500' => 'ghi', 'Gohir.A08G008650' => 'ghi', 'Gohir.A09G072700' => 'ghi', 'Gohir.A09G088301' => 'ghi', 'Gohir.A10G040600' => 'ghi', 'Gohir.A12G036300' => 'ghi', 'Gohir.A12G143350' => 'ghi', 'Gohir.A12G165500' => 'ghi', 'Gohir.A13G145700' => 'ghi', 'Gohir.D01G050000' => 'ghi', 'Gohir.D01G051366' => 'ghi', 'Gohir.D01G161350' => 'ghi', 'Gohir.D02G065900' => 'ghi', 'Gohir.D05G164200' => 'ghi', 'Gohir.D05G355500' => 'ghi', 'Gohir.D06G010400' => 'ghi', 'Gohir.D06G111250' => 'ghi', 'Gohir.D06G132000' => 'ghi', 'Gohir.D06G210500' => 'ghi', 'Gohir.D07G165675' => 'ghi', 'Gohir.D08G062240' => 'ghi', 'Gohir.D08G086101' => 'ghi', 'Gohir.D08G138060' => 'ghi', 'Gohir.D09G072300' => 'ghi', 'Gohir.D10G041400' => 'ghi', 'Gohir.D11G191020' => 'ghi', 'Gohir.D11G212066' => 'ghi', 'Gohir.D12G036300' => 'ghi', 'Gohir.D12G168600' => 'ghi', 'Gohir.D13G150600' => 'ghi', 'Gorai.001G057300' => 'gra', 'Gorai.002G069900' => 'gra', 'Gorai.002G200000' => 'gra', 'Gorai.003G067600' => 'gra', 'Gorai.005G074800' => 'gra', 'Gorai.006G087300' => 'gra', 'Gorai.008G037500' => 'gra', 'Gorai.008G181400' => 'gra', 'Gorai.009G169400' => 'gra', 'Gorai.009G387900' => 'gra', 'Gorai.010G013300' => 'gra', 'Gorai.010G153800' => 'gra', 'Gorai.010G255800' => 'gra', 'Gorai.011G043700' => 'gra', 'Gorai.011G198900' => 'gra', 'Gorai.013G168400' => 'gra', 'GSVIVG01005212001' => 'vvi', 'GSVIVG01006163001' => 'vvi', 'GSVIVG01009625001' => 'vvi', 'GSVIVG01014338001' => 'vvi', 'GSVIVG01020005001' => 'vvi', 'GSVIVG01021450001' => 'vvi', 'GSVIVG01023975001' => 'vvi', 'GSVIVG01034490001' => 'vvi', 'HanXRQChr04g0112071' => 'han', 'HanXRQChr05g0131151' => 'han', 'HanXRQChr09g0262371' => 'han', 'HanXRQChr09g0268401' => 'han', 'HanXRQChr10g0279241' => 'han', 'HanXRQChr10g0297961' => 'han', 'HanXRQChr11g0326231' => 'han', 'HanXRQChr11g0328471' => 'han', 'HanXRQChr16g0507941' => 'han', 'HanXRQChr17g0560211' => 'han', 'Haze_02108' => 'cav', 'Haze_02428' => 'cav', 'Haze_05593' => 'cav', 'Haze_06448' => 'cav', 'Haze_09427' => 'cav', 'Haze_12022' => 'cav', 'Haze_17612' => 'cav', 'Haze_17928' => 'cav', 'Hma1.2p1_0032F.1_g019250' => 'hma', 'Hma1.2p1_0163F.1_g072690' => 'hma', 'Hma1.2p1_0265F.1_g106710' => 'hma', 'Hma1.2p1_0286F.1_g113970' => 'hma', 'Hma1.2p1_0363F.1_g136640' => 'hma', 'Hma1.2p1_0584F.1_g183470' => 'hma', 'Hma1.2p1_0885F.1_g232570' => 'hma', 'HPP92_006022' => 'vpl', 'HPP92_007320' => 'vpl', 'HPP92_011521' => 'vpl', 'HPP92_019387' => 'vpl', 'HPP92_024038' => 'vpl', 'Hund05891' => 'sun', 'Hund06450' => 'sun', 'Hund12053' => 'sun', 'Hund16800' => 'sun', 'Hund21222' => 'sun', 'Hund22896' => 'sun', 'Hund23746' => 'sun', 'Hund27083' => 'sun', 'Lalb_Chr02g0141831' => 'lal', 'Lalb_Chr02g0141841' => 'lal', 'Lalb_Chr05g0220411' => 'lal', 'Lalb_Chr06g0162081' => 'lal', 'Lalb_Chr09g0327651' => 'lal', 'Lalb_Chr13g0295051' => 'lal', 'Lalb_Chr15g0086801' => 'lal', 'Lalb_Chr16g0383781' => 'lal', 'Lalb_Chr16g0383791' => 'lal', 'Lalb_Chr18g0055441' => 'lal', 'Lalb_Chr18g0059611' => 'lal', 'Lalb_Chr20g0109661' => 'lal', 'Lalb_Chr20g0109831' => 'lal', 'Lalb_Chr20g0121871' => 'lal', 'Lalb_Chr22g0355361' => 'lal', 'Lalb_Chr25g0286371' => 'lal', 'Lj1A1187G43' => 'lonja', 'Lj1A1205T50' => 'lonja', 'Lj1A800G33' => 'lonja', 'Lj1C1187T7' => 'lonja', 'Lj1C843T11' => 'lonja', 'Lj1g0010940' => 'lja', 'Lj2A288T69' => 'lonja', 'Lj3g0024276' => 'lja', 'Lj4A47T76' => 'lonja', 'Lj4g0005805' => 'lja', 'Lj4g0006097' => 'lja', 'Lj4g0008528' => 'lja', 'Lj4g0024907' => 'lja', 'Lj5g0012472' => 'lja', 'Lj5g0018648' => 'lja', 'Lj6C789G1' => 'lonja', 'Lj6g0004000' => 'lja', 'Lj7A292G67' => 'lonja', 'Lj7A292T64' => 'lonja', 'Lj9A400T58' => 'lonja', 'Lsat_1_v5_gn_1_126181' => 'lsa', 'Lsat_1_v5_gn_4_123041' => 'lsa', 'Lsat_1_v5_gn_4_133620' => 'lsa', 'Lsat_1_v5_gn_4_53221' => 'lsa', 'Lsat_1_v5_gn_4_71961' => 'lsa', 'Lsat_1_v5_gn_7_105241' => 'lsa', 'Lsat_1_v5_gn_7_21361' => 'lsa', 'Lsat_1_v5_gn_7_28860' => 'lsa', 'Lsat_1_v5_gn_7_31260' => 'lsa', 'Lsat_1_v5_gn_8_52801' => 'lsa', 'Manes.02G191400' => 'mes', 'Manes.03G110100' => 'mes', 'Manes.04G071100' => 'mes', 'Manes.05G100500' => 'mes', 'Manes.05G164700' => 'mes', 'Manes.15G087000' => 'mes', 'Manes.15G121500' => 'mes', 'Manes.16G028300' => 'mes', 'Manes.17G046100' => 'mes', 'Manes.17G069800' => 'mes', 'Manes.18G100500' => 'mes', 'Mapoly0002s0109' => 'mpo', 'Mapoly0024s0007' => 'mpo', 'Mapoly0089s0032' => 'mpo', 'MBI04_g42241_MAGBIO' => 'mbi', 'MBI05_g11988_MAGBIO' => 'mbi', 'MBI05_g35452_MAGBIO' => 'mbi', 'MBI07_g30179_MAGBIO' => 'mbi', 'MBI07_g35859_MAGBIO' => 'mbi', 'MBI07_g35860_MAGBIO' => 'mbi', 'MBI07_g37166_MAGBIO' => 'mbi', 'MBI08_g18172_MAGBIO' => 'mbi', 'MBI09_g08441_MAGBIO' => 'mbi', 'MBI13_g01676_MAGBIO' => 'mbi', 'MBI14_g42955_MAGBIO' => 'mbi', 'MBI16_g13161_MAGBIO' => 'mbi', 'MBI17_g27204_MAGBIO' => 'mbi', 'MBI19_g21595_MAGBIO' => 'mbi', 'MD00G1148400' => 'mdo', 'MD02G1301200' => 'mdo', 'MD03G1227800' => 'mdo', 'MD05G1041100' => 'mdo', 'MD05G1124800' => 'mdo', 'MD05G1284000' => 'mdo', 'MD05G1338800' => 'mdo', 'MD05G1338900' => 'mdo', 'MD07G1022800' => 'mdo', 'MD10G1047500' => 'mdo', 'MD10G1127500' => 'mdo', 'MD10G1262300' => 'mdo', 'MD10G1293800' => 'mdo', 'MD16G1074300' => 'mdo', 'Medtr1g021670' => 'mtr', 'Medtr1g096320' => 'mtr', 'Medtr2g013690' => 'mtr', 'Medtr2g019450' => 'mtr', 'Medtr2g085170' => 'mtr', 'Medtr4g088785' => 'mtr', 'Medtr8g055930' => 'mtr', 'Medtr8g085850' => 'mtr', 'MELO3C002605.2' => 'cme', 'MELO3C003891.2' => 'cme', 'MELO3C004012.2' => 'cme', 'MELO3C007134.2' => 'cme', 'MELO3C008118.2' => 'cme', 'MELO3C016700.2' => 'cme', 'MELO3C024127.2' => 'cme', 'MELO3C033361.2' => 'cme', 'MELO3C033362.2' => 'cme', 'Migut.C00430' => 'egut', 'Migut.C01246' => 'egut', 'Migut.E00101' => 'egut', 'Migut.H01486' => 'egut', 'Migut.H01939' => 'egut', 'Migut.K00360' => 'egut', 'Migut.M00910' => 'egut', 'Migut.M01139' => 'egut', 'Migut.N02677' => 'egut', 'MSTRG.13252' => 'ama', 'MSTRG.14701' => 'ama', 'MSTRG.1521' => 'ama', 'MSTRG.15884' => 'ama', 'MSTRG.16242' => 'ama', 'MSTRG.22285' => 'ama', 'MSTRG.22444' => 'ama', 'MSTRG.2349' => 'ama', 'MSTRG.26308' => 'ama', 'MSTRG.28296' => 'ama', 'MSTRG.9895' => 'ama', 'Nitab4.5_0000110g0060' => 'nta', 'Nitab4.5_0000420g0130' => 'nta', 'Nitab4.5_0000422g0030' => 'nta', 'Nitab4.5_0000560g0180' => 'nta', 'Nitab4.5_0000703g0100' => 'nta', 'Nitab4.5_0000786g0200' => 'nta', 'Nitab4.5_0001336g0020' => 'nta', 'Nitab4.5_0001796g0030' => 'nta', 'Nitab4.5_0003348g0060' => 'nta', 'Nitab4.5_0003698g0040' => 'nta', 'Nitab4.5_0003942g0090' => 'nta', 'Nitab4.5_0004775g0070' => 'nta', 'Nitab4.5_0004864g0030' => 'nta', 'Nitab4.5_0005615g0020' => 'nta', 'Nitab4.5_0009288g0030' => 'nta', 'Nitab4.5_0009341g0010' => 'nta', 'Nitab4.5_0009535g0010' => 'nta', 'Nn1g03995' => 'nnu', 'Nn1g04100' => 'nnu', 'Nn1g06530' => 'nnu', 'Nn3g16404' => 'nnu', 'Nn3g17212' => 'nnu', 'Nn3g20776' => 'nnu', 'Nn3g21923' => 'nnu', 'Nn5g27737' => 'nnu', 'Nn5g29461' => 'nnu', 'Nn7g38355' => 'nnu', 'Nn8g39873' => 'nnu', 'Oeu000548.2' => 'oeu', 'Oeu004672.1' => 'oeu', 'Oeu015605.2' => 'oeu', 'Oeu016092.1' => 'oeu', 'Oeu017879.3' => 'oeu', 'Oeu024910.1' => 'oeu', 'Oeu028965.1' => 'oeu', 'Oeu031269.1' => 'oeu', 'Oeu031270.1' => 'oeu', 'Oeu032535.1' => 'oeu', 'Oeu034151.1' => 'oeu', 'Oeu034152.1' => 'oeu', 'Oeu034588.2' => 'oeu', 'Oeu050846.1' => 'oeu', 'Oeu050849.2' => 'oeu', 'Oeu051063.2' => 'oeu', 'Oeu052368.1' => 'oeu', 'Oeu052370.1' => 'oeu', 'Os01g0210400' => 'osa', 'Os01g0304300' => 'osa', 'Os01g0749100' => 'osa', 'Os02g0745800' => 'osa', 'Os03g0769050' => 'osa', 'Os05g0531500' => 'osa', 'Os06g0724300' => 'osa', 'Os11g0198100' => 'osa', 'Peaxi162Scf00069g01425' => 'pax', 'Peaxi162Scf00280g00811' => 'pax', 'Peaxi162Scf00310g00615' => 'pax', 'Peaxi162Scf00362g00542' => 'pax', 'Peaxi162Scf00461g00310' => 'pax', 'Peaxi162Scf00530g00118' => 'pax', 'Peaxi162Scf00541g00057' => 'pax', 'Peaxi162Scf00661g00017' => 'pax', 'Peaxi162Scf00926g00027' => 'pax', 'Peaxi162Scf01064g00263' => 'pax', 'Peaxi162Scf01211g00135' => 'pax', 'PGR004G2336' => 'pgr', 'PGR042G0327' => 'pgr', 'PGR042G1957' => 'pgr', 'PGR042G2003' => 'pgr', 'PGR042G3929' => 'pgr', 'PGR083G1137' => 'pgr', 'PGR083G1364' => 'pgr', 'PGSC0003DMG400003381' => 'stu', 'PGSC0003DMG400003417' => 'stu', 'PGSC0003DMG400008981' => 'stu', 'PGSC0003DMG400012417' => 'stu', 'PGSC0003DMG400012823' => 'stu', 'PGSC0003DMG400016885' => 'stu', 'PGSC0003DMG400022812' => 'stu', 'PGSC0003DMG400029726' => 'stu', 'PGSC0003DMG401009243' => 'stu', 'PGSC0003DMG401031505' => 'stu', 'PGSC0003DMG402031505' => 'stu', 'Phvul.001G017600' => 'pvu', 'Phvul.002G193500' => 'pvu', 'Phvul.002G228900' => 'pvu', 'Phvul.002G236800' => 'pvu', 'Phvul.003G049500' => 'pvu', 'Phvul.005G072000' => 'pvu', 'Phvul.006G164800' => 'pvu', 'Phvul.006G185100' => 'pvu', 'Phvul.007G090000' => 'pvu', 'Potri.001G399800' => 'ptr', 'Potri.002G149900' => 'ptr', 'Potri.004G044100' => 'ptr', 'Potri.004G177600' => 'ptr', 'Potri.009G138000' => 'ptr', 'Potri.010G094000' => 'ptr', 'Potri.011G053000' => 'ptr', 'Potri.011G119300' => 'ptr', 'Potri.013G113700' => 'ptr', 'Potri.018G107800' => 'ptr', 'Potri.019G084100' => 'ptr', 'Pp3c14_23720' => 'ppa', 'Pp3c16_6340' => 'ppa', 'Pp3c23_13420' => 'ppa', 'Pp3c24_2740' => 'ppa', 'Pp3c25_860' => 'ppa', 'Pp3c8_21750' => 'ppa', 'Prupe.1G273000' => 'ppe', 'Prupe.1G273700' => 'ppe', 'Prupe.1G274100' => 'ppe', 'Prupe.2G023300' => 'ppe', 'Prupe.4G048000' => 'ppe', 'Prupe.4G080400' => 'ppe', 'Prupe.4G181200' => 'ppe', 'Prupe.8G056900' => 'ppe', 'Prupe.8G168700' => 'ppe', 'Psat1g189080' => 'psa', 'Psat1g204760' => 'psa', 'Psat4g175560' => 'psa', 'Psat4g177720' => 'psa', 'Psat5g244240' => 'psa', 'Psat6g010720' => 'psa', 'Psat6g187200' => 'psa', 'Psat7g072040' => 'psa', 'PSO017G3501' => 'pso', 'PSO063G2148' => 'pso', 'PSO063G5608' => 'pso', 'PSO210G6392' => 'pso', 'PSO541G2319' => 'pso', 'PSO541G2836' => 'pso', 'PSO541G4012' => 'pso', 'PSO541G6253' => 'pso', 'PSO675G0580' => 'pso', 'PSO675G0856' => 'pso', 'PSO675G5635' => 'pso', 'PSO675G9157' => 'pso', 'PSO832G1660' => 'pso', 'PSO832G1969' => 'pso', 'QL02p007186' => 'qlo', 'QL02p033904' => 'qlo', 'QL03p064391' => 'qlo', 'QL05p040593' => 'qlo', 'QL05p058242' => 'qlo', 'QL08p021825' => 'qlo', 'QL11p004981' => 'qlo', 'RcHm_v2.0_Chr1g0318301' => 'rch', 'RcHm_v2.0_Chr4g0418501' => 'rch', 'RcHm_v2.0_Chr4g0439971' => 'rch', 'RcHm_v2.0_Chr5g0008541' => 'rch', 'RcHm_v2.0_Chr5g0014101' => 'rch', 'RcHm_v2.0_Chr5g0014131' => 'rch', 'RcHm_v2.0_Chr5g0033621' => 'rch', 'RcHm_v2.0_Chr6g0272041' => 'rch', 'RcHm_v2.0_Chr6g0278831' => 'rch', 'Rhsim02G0130400' => 'rsi', 'Rhsim02G0171100' => 'rsi', 'Rhsim05G0053000' => 'rsi', 'Rhsim05G0053100' => 'rsi', 'Rhsim06G0096500' => 'rsi', 'Rhsim06G0096600' => 'rsi', 'Rhsim06G0199100' => 'rsi', 'Rhsim12G0062300' => 'rsi', 'Rhsim12G0062800' => 'rsi', 'Sabra02G0118600' => 'sbr', 'Sabra04G0027300' => 'sbr', 'Sabra04G0119500' => 'sbr', 'Sabra08G0112500' => 'sbr', 'Sabra11G0036800' => 'sbr', 'Sabra11G0103800' => 'sbr', 'Sabra13G0096300' => 'sbr', 'Sabra16G0262300' => 'sbr', 'Sabra18G0091700' => 'sbr', 'Sabra19G0095400' => 'sbr', 'SalBow6G3080' => 'sbo', 'SalBow7G1157' => 'sbo', 'SalBow7G2123' => 'sbo', 'SalBow7G2285' => 'sbo', 'SalBow7G3537' => 'sbo', 'SalBow8G2947' => 'sbo', 'SalBow8G4463' => 'sbo', 'SalBow8G5466' => 'sbo', 'Sc01g0001750' => 'sci', 'Sc02g0006640' => 'sci', 'Sc02g0006670' => 'sci', 'Sc04g0008220' => 'sci', 'Sc05g0006190' => 'sci', 'Sc08g0002760' => 'sci', 'Sc17g0006170' => 'sci', 'Sc22g0002050' => 'sci', 'Sc23g0001190' => 'sci', 'Sc24g0000980' => 'sci', 'Sed0006245' => 'sed', 'Sed0007543' => 'sed', 'Sed0009411' => 'sed', 'Sed0010765' => 'sed', 'Sed0012944' => 'sed', 'Sed0014682' => 'sed', 'Sed0016174' => 'sed', 'Sed0016796' => 'sed', 'Sed0020317' => 'sed', 'Sed0021467' => 'sed', 'SEGI_01316' => 'sgi', 'SEGI_03374' => 'sgi', 'SEGI_16265' => 'sgi', 'SEGI_18569' => 'sgi', 'SEGI_20351' => 'sgi', 'SEGI_26395' => 'sgi', 'SEGI_29469' => 'sgi', 'SEGI_34771' => 'sgi', 'SEGI_36769' => 'sgi', 'SEGI_37139' => 'sgi', 'SGA_v2.0_scaffold100G29687' => 'sas', 'SGA_v2.0_scaffold118G32472' => 'sas', 'SGA_v2.0_scaffold14G07051' => 'sas', 'SGA_v2.0_scaffold183G39845' => 'sas', 'SGA_v2.0_scaffold1G00174' => 'sas', 'SGA_v2.0_scaffold22G09714' => 'sas', 'SGA_v2.0_scaffold333G48992' => 'sas', 'SGA_v2.0_scaffold46G17491' => 'sas', 'SGA_v2.0_scaffold49G18294' => 'sas', 'SGA_v2.0_scaffold63G21658' => 'sas', 'SHI01741' => 'shi', 'SHI05771' => 'shi', 'SHI18077' => 'shi', 'SHI20525' => 'shi', 'SHI20527' => 'shi', 'SHI20528' => 'shi', 'SMO172G0185' => 'smo', 'SMO198G0020' => 'smo', 'SMO351G0006' => 'smo', 'SMO356G0118' => 'smo', 'SMO358G0296' => 'smo', 'SMO367G0079' => 'smo', 'SMO367G1277' => 'smo', 'Solyc01g014220.3' => 'sly', 'Solyc01g111770.2' => 'sly', 'Solyc02g078180.3' => 'sly', 'Solyc03g006430.3' => 'sly', 'Solyc03g006456.1' => 'sly', 'Solyc03g079860.2' => 'sly', 'Solyc04g079770.3' => 'sly', 'Solyc05g007430.4' => 'sly', 'Solyc07g063150.3' => 'sly', 'Solyc08g016620.3' => 'sly', 'Solyc09g057590.3' => 'sly', 'Solyc09g057600.1' => 'sly', 'Solyc10g009050.3' => 'sly', 'Solyc11g017420.2' => 'sly', 'Sopen01g053810' => 'spe', 'Sopen02g023040' => 'spe', 'Sopen03g002440' => 'spe', 'Sopen04g033350' => 'spe', 'Sopen05g003310' => 'spe', 'Sopen07g004050' => 'spe', 'Sopen07g031340' => 'spe', 'Sopen08g006990' => 'spe', 'Sopen10g004830' => 'spe', 'Sopen11g009370' => 'spe', 'Sp1g24450' => 'spa', 'Sp1g29670' => 'spa', 'Sp1g39600' => 'spa', 'Sp2g11080' => 'spa', 'Sp2g13970' => 'spa', 'Sp4g16130' => 'spa', 'Sp6g13080' => 'spa', 'Sp7g37270' => 'spa', 'TAR371G0065' => 'tar', 'TAR376G0340' => 'tar', 'TAR376G0435' => 'tar', 'TAR381G0002' => 'tar', 'TAR381G1236' => 'tar', 'TAR624G0055' => 'tar', 'TAR624G0324' => 'tar', 'TAR624G0696' => 'tar', 'TAR624G0906' => 'tar', 'TAR625G0107' => 'tar', 'TAR626G0015' => 'tar', 'TAR626G1356' => 'tar', 'TAR627G0888' => 'tar', 'TAR628G0399' => 'tar', 'TAR628G1327' => 'tar', 'TAR629G2831' => 'tar', 'TAR629G2874' => 'tar', 'TAR633G1432' => 'tar', 'TAR633G2771' => 'tar', 'THA.LOC104803394' => 'tha', 'THA.LOC104805153' => 'tha', 'THA.LOC104806784' => 'tha', 'THA.LOC104810473' => 'tha', 'THA.LOC104813100' => 'tha', 'THA.LOC104814215' => 'tha', 'THA.LOC104815554' => 'tha', 'THA.LOC104820544' => 'tha', 'THA.LOC104824754' => 'tha', 'THA.LOC104827717' => 'tha', 'Thecc.02G031400' => 'tca', 'Thecc.02G055900' => 'tca', 'Thecc.02G350800' => 'tca', 'Thecc.06G150900' => 'tca', 'Thecc.06G186600' => 'tca', 'Thecc.07G089600' => 'tca', 'Thecc.08G020400' => 'tca', 'Thecc.08G182100' => 'tca', 'Thhalv10000873m.g' => 'esa', 'Thhalv10004185m.g' => 'esa', 'Thhalv10006981m.g' => 'esa', 'Thhalv10007204m.g' => 'esa', 'Thhalv10011374m.g' => 'esa', 'Thhalv10013482m.g' => 'esa', 'Thhalv10017801m.g' => 'esa', 'Thhalv10024983m.g' => 'esa', 'TPR.G12072' => 'tpr', 'TPR.G15769' => 'tpr', 'TPR.G16504' => 'tpr', 'TPR.G16506' => 'tpr', 'TPR.G24345' => 'tpr', 'TPR.G26666' => 'tpr', 'TPR.G27320' => 'tpr', 'TPR.G31819' => 'tpr', 'TPR.G38879' => 'tpr', 'TPR.G39015' => 'tpr', 'TPR.G8819' => 'tpr', 'TWI09G0924' => 'twi', 'TWI12G0811' => 'twi', 'TWI12G1294' => 'twi', 'TWI31G0150' => 'twi', 'TWI36G1262' => 'twi', 'TWI38G1287' => 'twi', 'TWI38G1633' => 'twi', 'TWI38G1982' => 'twi', 'TWI39G0116' => 'twi', 'TWI60G1011' => 'twi', 'TWI63G0171' => 'twi', 'TWI73G0839' => 'twi', 'TWI79G1511' => 'twi', 'unitig_0.g915' => 'ugi', 'unitig_0.g916' => 'ugi', 'unitig_21.g20219' => 'ugi', 'unitig_21.g20416' => 'ugi', 'unitig_578.g16132' => 'ugi', 'unitig_578.g16718' => 'ugi', 'unitig_62.g23481' => 'ugi', 'unitig_744.g24535' => 'ugi', 'unitig_749.g13525' => 'ugi', 'vmacro01248' => 'vma', 'vmacro02290' => 'vma', 'vmacro10946' => 'vma', 'vmacro11865' => 'vma', 'vmacro12493' => 'vma', 'vmacro17322' => 'vma', 'vmacro21599' => 'vma', 'vmacro23041' => 'vma', 'VMungo0251G0004' => 'vmu', 'VMungo0251G2639' => 'vmu', 'VMungo0251G2967' => 'vmu', 'VMungo0540G0864' => 'vmu', 'VMungo0540G1569' => 'vmu', 'VMungo0647G0317' => 'vmu', 'VMungo0720G1373' => 'vmu', 'VMungo0720G1508' => 'vmu', 'VMungo1080G0485' => 'vmu', 'VMungo1215G3177' => 'vmu', 'Zm00001eb112600' => 'zma', 'Zm00001eb120220' => 'zma', 'Zm00001eb153240' => 'zma', 'Zm00001eb168880' => 'zma', 'Zm00001eb213920' => 'zma', 'Zm00001eb228280' => 'zma', 'Zm00001eb254580' => 'zma', 'Zm00001eb272180' => 'zma', 'Zm00001eb293190' => 'zma', 'Zm00001eb322930' => 'zma', 'Zm00001eb353360' => 'zma', 'Zm00001eb353390' => 'zma', 'Zm00001eb353430' => 'zma', 'Zm00001eb353440' => 'zma', 'Zm00001eb353780' => 'zma' ) $gf_id = 'HOM05D000499' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000499' ) $data_identifier = 'HOM05D000499' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 29, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 12, 'amhyb' => (int) 8, 'aly' => (int) 12, 'aox' => (int) 9, 'arhy' => (int) 26, 'ath' => (int) 8, 'atr' => (int) 7, 'acertr' => (int) 10, 'cqu' => (int) 15, 'bca' => (int) 29, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 11, 'cansat' => (int) 8, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 9, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 8, 'cpa' => (int) 10, 'csa' => (int) 7, 'camsi' => (int) 20, 'dca' => (int) 8, 'din' => (int) 12, 'dzi' => (int) 14, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 6, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 38, 'gra' => (int) 16, 'vvi' => (int) 8, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 5, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 11, 'lja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 11, 'mpo' => (int) 3, 'mbi' => (int) 14, 'mdo' => (int) 14, 'mtr' => (int) 8, 'cme' => (int) 9, 'egut' => (int) 9, 'ama' => (int) 11, 'nta' => (int) 17, 'nnu' => (int) 11, 'oeu' => (int) 18, 'osa' => (int) 8, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 6, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 9, 'rsi' => (int) 9, 'sbr' => (int) 10, 'sbo' => (int) 8, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 10, 'sas' => (int) 10, 'shi' => (int) 6, 'smo' => (int) 7, 'sly' => (int) 14, 'spe' => (int) 10, 'spa' => (int) 8, 'tar' => (int) 19, 'tha' => (int) 10, 'tca' => (int) 8, 'esa' => (int) 8, 'tpr' => (int) 11, 'twi' => (int) 13, 'ugi' => (int) 9, 'vma' => (int) 8, 'vmu' => (int) 10, 'zma' => (int) 15 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb353780' $species_info = array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ) $local_species = 'egut' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000499', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1066', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p29780' => 'bna', 'A02p33180' => 'bna', 'A03p16470' => 'bna', 'A03p66010' => 'bna', 'A04p25970' => 'bna', 'A06p01270' => 'bna', 'A06p46080' => 'bna', 'A07p11400' => 'bna', 'A08p01840' => 'bna', 'A08p08230' => 'bna', 'A08p25740' => 'bna', 'A09p32070' => 'bna', 'A09p37830' => 'bna', 'A09p42840' => 'bna', 'A09p42850' => 'bna', 'Aa31LG10G2060' => 'aar', 'Aa31LG2G7410' => 'aar', 'Aa31LG6G10200' => 'aar', 'Aa31LG6G16680' => 'aar', 'Aa31LG6G8470' => 'aar', 'Aa31LG9G12730' => 'aar', 'Aa31LG9G13680' => 'aar', 'Aa31LG9G14920' => 'aar', 'Aa31LG9G6650' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4977' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5467' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3254' => 'aag', 'Actinidia02578' => 'ach', 'Actinidia07693' => 'ach', 'Actinidia08413' => 'ach', 'Actinidia08414' => 'ach', 'Actinidia15289' => 'ach', 'Actinidia19871' => 'ach', 'Actinidia21475' => 'ach', 'Actinidia22576' => 'ach', 'Actinidia28327' => 'ach', 'Actinidia32491' => 'ach', 'Actinidia39463' => 'ach', 'Actinidia39571' => 'ach', 'Ah.01g013750' => 'amhyb', 'Ah.01g023210' => 'amhyb', 'Ah.04g164850' => 'amhyb', 'Ah.05g178060' => 'amhyb', 'Ah.07g204270' => 'amhyb', 'Ah.07g208480' => 'amhyb', 'Ah.09g237410' => 'amhyb', 'Ah.14g089460' => 'amhyb', 'AL1G41790' => 'aly', 'AL1G49050' => 'aly', 'AL1G53810' => 'aly', 'AL1G61400' => 'aly', 'AL4G18580' => 'aly', 'AL5G12510' => 'aly', 'AL5G12540' => 'aly', 'AL6G43230' => 'aly', 'AL7G10370' => 'aly', 'AL7G19250' => 'aly', 'AL8G12240' => 'aly', 'AL8G18540' => 'aly', 'Aqoxy1G02409' => 'aox', 'Aqoxy2G03993' => 'aox', 'Aqoxy3G03357' => 'aox', 'Aqoxy4G00785' => 'aox', 'Aqoxy5G02598' => 'aox', 'Aqoxy6G00132' => 'aox', 'Aqoxy7G01776' => 'aox', 'Aqoxy7G02316' => 'aox', 'Aqoxy7G03973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.12AFKW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B8730' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27IQR1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3F75VG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3RE0GA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41TCQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.527VTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FIR39' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5W8UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DA38EV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ63HS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H1I32C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HC27T5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4M8AP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7N3CZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9UVDZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LS1NQA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT1D4B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SKC4TM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCFV76' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF9Q1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQWD9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1ZM88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WE07RT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YCK7VH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJE6Q6' => 'arhy', 'AT1G28240' => 'ath', 'AT1G34550' => 'ath', 'AT1G53040' => 'ath', 'AT2G02910' => 'ath', 'AT4G09630' => 'ath', 'AT4G38500' => 'ath', 'AT5G42660' => 'ath', 'AT5G46220' => 'ath', 'ATR0152G026' => 'atr', 'ATR0564G343' => 'atr', 'ATR0706G151' => 'atr', 'ATR0733G207' => 'atr', 'ATR0751G234' => 'atr', 'ATR0807G048' => 'atr', 'ATR1091G084' => 'atr', 'Atru.chr10.1229' => 'acertr', 'Atru.chr10.1230' => 'acertr', 'Atru.chr10.1874' => 'acertr', 'Atru.chr11.1808' => 'acertr', 'Atru.chr13.1795' => 'acertr', 'Atru.chr13.570' => 'acertr', 'Atru.chr2.2608' => 'acertr', 'Atru.chr2.2609' => 'acertr', 'Atru.chr5.3428' => 'acertr', 'Atru.chr8.1171' => 'acertr', 'AUR62004651' => 'cqu', 'AUR62008675' => 'cqu', 'AUR62010014' => 'cqu', 'AUR62013004' => 'cqu', 'AUR62014825' => 'cqu', 'AUR62015015' => 'cqu', 'AUR62015151' => 'cqu', 'AUR62017020' => 'cqu', 'AUR62019422' => 'cqu', 'AUR62023570' => 'cqu', 'AUR62025571' => 'cqu', 'AUR62029098' => 'cqu', 'AUR62033863' => 'cqu', 'AUR62034296' => 'cqu', 'AUR62040075' => 'cqu', 'BcaB02g07334' => 'bca', 'BcaB02g10575' => 'bca', 'BcaB03g12119' => 'bca', 'BcaB03g12120' => 'bca', 'BcaB03g13945' => 'bca', 'BcaB04g17123' => 'bca', 'BcaB04g17867' => 'bca', 'BcaB04g19839' => 'bca', 'BcaB07g30317' => 'bca', 'BcaB07g32432' => 'bca', 'BcaB07g33362' => 'bca', 'BcaB08g36611' => 'bca', 'BcaC01g00028' => 'bca', 'BcaC01g01356' => 'bca', 'BcaC01g02034' => 'bca', 'BcaC01g06051' => 'bca', 'BcaC03g16839' => 'bca', 'BcaC03g17176' => 'bca', 'BcaC05g26829' => 'bca', 'BcaC06g31490' => 'bca', 'BcaC06g35344' => 'bca', 'BcaC06g36570' => 'bca', 'BcaC07g37537' => 'bca', 'BcaC08g43491' => 'bca', 'BcaC08g43773' => 'bca', 'BcaNung00234' => 'bca', 'BcaNung01982' => 'bca', 'BcaNung03707' => 'bca', 'BcaNung06454' => 'bca', 'BolC2t10762H' => 'bol', 'BolC2t11191H' => 'bol', 'BolC3t14322H' => 'bol', 'BolC3t19747H' => 'bol', 'BolC3t21425H' => 'bol', 'BolC4t27800H' => 'bol', 'BolC5t31423H' => 'bol', 'BolC6t35951H' => 'bol', 'BolC6t36282H' => 'bol', 'BolC7t40678H' => 'bol', 'BolC7t40679H' => 'bol', 'BolC7t42222H' => 'bol', 'BolC7t43492H' => 'bol', 'BolC7t46785H' => 'bol', 'BolC8t47853H' => 'bol', 'BolC9t56805H' => 'bol', 'BraA02t08000Z' => 'bra', 'BraA02t08341Z' => 'bra', 'BraA03t10936Z' => 'bra', 'BraA03t15657Z' => 'bra', 'BraA04t18100Z' => 'bra', 'BraA05t20523Z' => 'bra', 'BraA06t23353Z' => 'bra', 'BraA06t27473Z' => 'bra', 'BraA06t27769Z' => 'bra', 'BraA07t28928Z' => 'bra', 'BraA08t32236Z' => 'bra', 'BraA08t32841Z' => 'bra', 'BraA08t34524Z' => 'bra', 'BraA09t38742Z' => 'bra', 'BraA09t39295Z' => 'bra', 'C02p47180' => 'bna', 'C02p50990' => 'bna', 'C03p19360' => 'bna', 'C03p74950' => 'bna', 'C03p91000' => 'bna', 'C04p63260' => 'bna', 'C05p27050' => 'bna', 'C06p08750' => 'bna', 'C06p11490' => 'bna', 'C07p02820' => 'bna', 'C07p17180' => 'bna', 'C07p29440' => 'bna', 'C07p63730' => 'bna', 'C09p39260' => 'bna', 'CAN.G1164.34' => 'can', 'CAN.G1164.39' => 'can', 'CAN.G1530.3' => 'can', 'CAN.G162.61' => 'can', 'CAN.G176.6' => 'can', 'CAN.G289.49' => 'can', 'CAN.G370.21' => 'can', 'CAN.G370.22' => 'can', 'CAN.G371.117' => 'can', 'CAN.G58.37' => 'can', 'CAN.G588.98' => 'can', 'CANSAT21G2266' => 'cansat', 'CANSAT25G2799' => 'cansat', 'CANSAT35G0862' => 'cansat', 'CANSAT35G1704' => 'cansat', 'CANSAT35G1760' => 'cansat', 'CANSAT56G3971' => 'cansat', 'CANSAT56G4116' => 'cansat', 'CANSAT80G1259' => 'cansat', 'CARHR027730' => 'chi', 'CARHR033880' => 'chi', 'CARHR043270' => 'chi', 'CARHR145330' => 'chi', 'CARHR145340' => 'chi', 'CARHR175570' => 'chi', 'CARHR181570' => 'chi', 'CARHR258470' => 'chi', 'CARHR260490' => 'chi', 'CARHR294220' => 'chi', 'Carub.0001s2668' => 'cru', 'Carub.0001s3257' => 'cru', 'Carub.0001s4220' => 'cru', 'Carub.0005s0179' => 'cru', 'Carub.0006s2807' => 'cru', 'Carub.0007s0039' => 'cru', 'Carub.0008s0169' => 'cru', 'Carub.0008s0636' => 'cru', 'Ca_00338_v3' => 'car', 'Ca_00542_v3' => 'car', 'Ca_01844_v3' => 'car', 'Ca_10611_v3' => 'car', 'Ca_13326_v3' => 'car', 'Ca_17944_v3' => 'car', 'Ca_18546_v3' => 'car', 'Ca_24219_v3' => 'car', 'Ca_29972_v3' => 'car', 'CBR_g3681' => 'cbr', 'CBR_g40021' => 'cbr', 'Cc01_g08140' => 'ccan', 'Cc02_g13410' => 'ccan', 'Cc02_g37480' => 'ccan', 'Cc05_g12030' => 'ccan', 'Cc09_g03370' => 'ccan', 'Cc09_g10300' => 'ccan', 'Cc10_g03530' => 'ccan', 'Cc10_g11380' => 'ccan', 'CDE01G0176' => 'cde', 'CDE02G0675' => 'cde', 'CDE02G0942' => 'cde', 'CDE02G1153' => 'cde', 'CDE02G4177' => 'cde', 'CDE04G2117' => 'cde', 'CDE04G2736' => 'cde', 'CDE08G1161' => 'cde', 'CDE09G1238' => 'cde', 'Cfa000467' => 'cfa', 'Cfa000947' => 'cfa', 'Cfa004969' => 'cfa', 'Cfa005284' => 'cfa', 'Cfa008993' => 'cfa', 'Cfa018187' => 'cfa', 'Cfa018454' => 'cfa', 'Cfa020585' => 'cfa', 'Ciclev10000424m.g' => 'ccl', 'Ciclev10003605m.g' => 'ccl', 'Ciclev10007828m.g' => 'ccl', 'Ciclev10014620m.g' => 'ccl', 'Ciclev10015169m.g' => 'ccl', 'Ciclev10018291m.g' => 'ccl', 'Ciclev10028256m.g' => 'ccl', 'Ciclev10033822m.g' => 'ccl', 'CiPaw.05G060300' => 'cil', 'CiPaw.05G085000' => 'cil', 'CiPaw.06G083700' => 'cil', 'CiPaw.06G120300' => 'cil', 'CiPaw.09G060500' => 'cil', 'CiPaw.09G123800' => 'cil', 'CiPaw.11G169700' => 'cil', 'CiPaw.12G118300' => 'cil', 'CiPaw.15G071000' => 'cil', 'CiPaw.15G081900' => 'cil', 'ClCG01G024610' => 'cla', 'ClCG03G006070' => 'cla', 'ClCG05G019250' => 'cla', 'ClCG09G009500' => 'cla', 'ClCG11G008200' => 'cla', 'ClCG11G018080' => 'cla', 'COL.COLO4_17373' => 'col', 'COL.COLO4_22994' => 'col', 'COL.COLO4_26389' => 'col', 'COL.COLO4_27170' => 'col', 'COL.COLO4_31074' => 'col', 'COL.COLO4_31465' => 'col', 'COL.COLO4_36438' => 'col', 'COL.COLO4_36439' => 'col', 'Cpa.g.c38781' => 'cpa', 'Cpa.g.sc128.12' => 'cpa', 'Cpa.g.sc166.7' => 'cpa', 'Cpa.g.sc166.8' => 'cpa', 'Cpa.g.sc20.111' => 'cpa', 'Cpa.g.sc27.31' => 'cpa', 'Cpa.g.sc64.36' => 'cpa', 'Cpa.g.sc64.37' => 'cpa', 'Cpa.g.sc66.49' => 'cpa', 'Cpa.g.sc80.64' => 'cpa', 'CsaV3_1G012320' => 'csa', 'CsaV3_2G008480' => 'csa', 'CsaV3_2G033450' => 'csa', 'CsaV3_3G044830' => 'csa', 'CsaV3_4G033710' => 'csa', 'CsaV3_6G051730' => 'csa', 'CsaV3_7G025350' => 'csa', 'CSS0001067' => 'camsi', 'CSS0005996' => 'camsi', 'CSS0006590' => 'camsi', 'CSS0009673' => 'camsi', 'CSS0010201' => 'camsi', 'CSS0010549' => 'camsi', 'CSS0011364' => 'camsi', 'CSS0014473' => 'camsi', 'CSS0014961' => 'camsi', 'CSS0020191' => 'camsi', 'CSS0021165' => 'camsi', 'CSS0022306' => 'camsi', 'CSS0030591' => 'camsi', 'CSS0030696' => 'camsi', 'CSS0032653' => 'camsi', 'CSS0037487' => 'camsi', 'CSS0041102' => 'camsi', 'CSS0041261' => 'camsi', 'CSS0046246' => 'camsi', 'CSS0049256' => 'camsi', 'DCAR_004075' => 'dca', 'DCAR_011538' => 'dca', 'DCAR_019553' => 'dca', 'DCAR_020952' => 'dca', 'DCAR_021739' => 'dca', 'DCAR_027407' => 'dca', 'DCAR_027913' => 'dca', 'DCAR_028066' => 'dca', 'Dinv05899' => 'din', 'Dinv07563' => 'din', 'Dinv08010' => 'din', 'Dinv14125' => 'din', 'Dinv20172' => 'din', 'Dinv30743' => 'din', 'Dinv31229' => 'din', 'Dinv34162' => 'din', 'Dinv36028' => 'din', 'Dinv39368' => 'din', 'Dinv40565' => 'din', 'Dinv41706' => 'din', 'Duzib052G0089' => 'dzi', 'Duzib116G0641' => 'dzi', 'Duzib132G0069' => 'dzi', 'Duzib132G1219' => 'dzi', 'Duzib147G0278' => 'dzi', 'Duzib160G0480' => 'dzi', 'Duzib170G0661' => 'dzi', 'Duzib177G0591' => 'dzi', 'Duzib187G1353' => 'dzi', 'Duzib192G0858' => 'dzi', 'Duzib192G0883' => 'dzi', 'Duzib213G0506' => 'dzi', 'Duzib235G0289' => 'dzi', 'Duzib251G0422' => 'dzi', 'ECA232G3898' => 'eca', 'ECA233G5950' => 'eca', 'ECA234G1699' => 'eca', 'ECA234G2421' => 'eca', 'ECA236G0426' => 'eca', 'ECA236G4331' => 'eca', 'ECA248G2573' => 'eca', 'EL10Ac1g00077' => 'bvu', 'EL10Ac1g01746' => 'bvu', 'EL10Ac2g03464' => 'bvu', 'EL10Ac4g08176' => 'bvu', 'EL10Ac7g17521' => 'bvu', 'EL10Ac8g20386' => 'bvu', 'EL10Ac9g21343' => 'bvu', 'EL10Ac9g22688' => 'bvu', 'Eucgr.B03434' => 'egr', 'Eucgr.D00618' => 'egr', 'Eucgr.E02395' => 'egr', 'Eucgr.F01129' => 'egr', 'Eucgr.F02622' => 'egr', 'Eucgr.F04207' => 'egr', 'FAN01G0570' => 'fan', 'FAN03G3351' => 'fan', 'FAN06G3702' => 'fan', 'FAN07G2149' => 'fan', 'FAN10G3758' => 'fan', 'FAN11G1170' => 'fan', 'FAN11G2050' => 'fan', 'FAN11G2724' => 'fan', 'FAN12G1700' => 'fan', 'FAN12G2028' => 'fan', 'FAN15G1160' => 'fan', 'FAN15G3063' => 'fan', 'FAN16G2540' => 'fan', 'FAN16G3077' => 'fan', 'FAN16G3624' => 'fan', 'FAN17G0221' => 'fan', 'FAN20G2492' => 'fan', 'FAN20G2905' => 'fan', 'FAN21G0548' => 'fan', 'FAN21G1300' => 'fan', 'FAN22G0077' => 'fan', 'FAN22G1315' => 'fan', 'FAN24G1280' => 'fan', 'FAN24G1445' => 'fan', 'FAN24G3527' => 'fan', 'FAN25G0464' => 'fan', 'FAN25G2885' => 'fan', 'FAN25G3270' => 'fan', 'FAN27G1101' => 'fan', 'FAN27G2846' => 'fan', 'FAN27G3524' => 'fan', 'FvH4_2g11770' => 'fve', 'FvH4_2g15630' => 'fve', 'FvH4_3g05570' => 'fve', 'FvH4_3g09110' => 'fve', 'FvH4_3g19940' => 'fve', 'FvH4_4g04821' => 'fve', 'FvH4_4g31480' => 'fve', 'FvH4_7g01740' => 'fve', 'Glyma.05G130400' => 'gma', 'Glyma.05G156400' => 'gma', 'Glyma.07G197000' => 'gma', 'Glyma.08G085151' => 'gma', 'Glyma.08G114500' => 'gma', 'Glyma.08G300400' => 'gma', 'Glyma.10G215800' => 'gma', 'Glyma.12G224400' => 'gma', 'Glyma.13G179300' => 'gma', 'Glyma.13G218151' => 'gma', 'Glyma.13G238800' => 'gma', 'Glyma.13G276900' => 'gma', 'Glyma.14G078200' => 'gma', 'Glyma.15G074500' => 'gma', 'Glyma.15G094100' => 'gma', 'Glyma.17G247200' => 'gma', 'Glyma.18G120100' => 'gma', 'Glyma.20G176000' => 'gma', 'Gohir.A01G063600' => 'ghi', 'Gohir.A01G170301' => 'ghi', 'Gohir.A02G060500' => 'ghi', 'Gohir.A05G133850' => 'ghi', 'Gohir.A05G161400' => 'ghi', 'Gohir.A06G012900' => 'ghi', 'Gohir.A06G035901' => 'ghi', 'Gohir.A06G127100' => 'ghi', 'Gohir.A06G210500' => 'ghi', 'Gohir.A08G008650' => 'ghi', 'Gohir.A09G072700' => 'ghi', 'Gohir.A09G088301' => 'ghi', 'Gohir.A10G040600' => 'ghi', 'Gohir.A12G036300' => 'ghi', 'Gohir.A12G143350' => 'ghi', 'Gohir.A12G165500' => 'ghi', 'Gohir.A13G145700' => 'ghi', 'Gohir.D01G050000' => 'ghi', 'Gohir.D01G051366' => 'ghi', 'Gohir.D01G161350' => 'ghi', 'Gohir.D02G065900' => 'ghi', 'Gohir.D05G164200' => 'ghi', 'Gohir.D05G355500' => 'ghi', 'Gohir.D06G010400' => 'ghi', 'Gohir.D06G111250' => 'ghi', 'Gohir.D06G132000' => 'ghi', 'Gohir.D06G210500' => 'ghi', 'Gohir.D07G165675' => 'ghi', 'Gohir.D08G062240' => 'ghi', 'Gohir.D08G086101' => 'ghi', 'Gohir.D08G138060' => 'ghi', 'Gohir.D09G072300' => 'ghi', 'Gohir.D10G041400' => 'ghi', 'Gohir.D11G191020' => 'ghi', 'Gohir.D11G212066' => 'ghi', 'Gohir.D12G036300' => 'ghi', 'Gohir.D12G168600' => 'ghi', 'Gohir.D13G150600' => 'ghi', 'Gorai.001G057300' => 'gra', 'Gorai.002G069900' => 'gra', 'Gorai.002G200000' => 'gra', 'Gorai.003G067600' => 'gra', 'Gorai.005G074800' => 'gra', 'Gorai.006G087300' => 'gra', 'Gorai.008G037500' => 'gra', 'Gorai.008G181400' => 'gra', 'Gorai.009G169400' => 'gra', 'Gorai.009G387900' => 'gra', 'Gorai.010G013300' => 'gra', 'Gorai.010G153800' => 'gra', 'Gorai.010G255800' => 'gra', 'Gorai.011G043700' => 'gra', 'Gorai.011G198900' => 'gra', 'Gorai.013G168400' => 'gra', 'GSVIVG01005212001' => 'vvi', 'GSVIVG01006163001' => 'vvi', 'GSVIVG01009625001' => 'vvi', 'GSVIVG01014338001' => 'vvi', 'GSVIVG01020005001' => 'vvi', 'GSVIVG01021450001' => 'vvi', 'GSVIVG01023975001' => 'vvi', 'GSVIVG01034490001' => 'vvi', 'HanXRQChr04g0112071' => 'han', 'HanXRQChr05g0131151' => 'han', 'HanXRQChr09g0262371' => 'han', 'HanXRQChr09g0268401' => 'han', 'HanXRQChr10g0279241' => 'han', 'HanXRQChr10g0297961' => 'han', 'HanXRQChr11g0326231' => 'han', 'HanXRQChr11g0328471' => 'han', 'HanXRQChr16g0507941' => 'han', 'HanXRQChr17g0560211' => 'han', 'Haze_02108' => 'cav', 'Haze_02428' => 'cav', 'Haze_05593' => 'cav', 'Haze_06448' => 'cav', 'Haze_09427' => 'cav', 'Haze_12022' => 'cav', 'Haze_17612' => 'cav', 'Haze_17928' => 'cav', 'Hma1.2p1_0032F.1_g019250' => 'hma', 'Hma1.2p1_0163F.1_g072690' => 'hma', 'Hma1.2p1_0265F.1_g106710' => 'hma', 'Hma1.2p1_0286F.1_g113970' => 'hma', 'Hma1.2p1_0363F.1_g136640' => 'hma', 'Hma1.2p1_0584F.1_g183470' => 'hma', 'Hma1.2p1_0885F.1_g232570' => 'hma', 'HPP92_006022' => 'vpl', 'HPP92_007320' => 'vpl', 'HPP92_011521' => 'vpl', 'HPP92_019387' => 'vpl', 'HPP92_024038' => 'vpl', 'Hund05891' => 'sun', 'Hund06450' => 'sun', 'Hund12053' => 'sun', 'Hund16800' => 'sun', 'Hund21222' => 'sun', 'Hund22896' => 'sun', 'Hund23746' => 'sun', 'Hund27083' => 'sun', 'Lalb_Chr02g0141831' => 'lal', 'Lalb_Chr02g0141841' => 'lal', 'Lalb_Chr05g0220411' => 'lal', 'Lalb_Chr06g0162081' => 'lal', 'Lalb_Chr09g0327651' => 'lal', 'Lalb_Chr13g0295051' => 'lal', 'Lalb_Chr15g0086801' => 'lal', 'Lalb_Chr16g0383781' => 'lal', 'Lalb_Chr16g0383791' => 'lal', 'Lalb_Chr18g0055441' => 'lal', 'Lalb_Chr18g0059611' => 'lal', 'Lalb_Chr20g0109661' => 'lal', 'Lalb_Chr20g0109831' => 'lal', 'Lalb_Chr20g0121871' => 'lal', 'Lalb_Chr22g0355361' => 'lal', 'Lalb_Chr25g0286371' => 'lal', 'Lj1A1187G43' => 'lonja', 'Lj1A1205T50' => 'lonja', 'Lj1A800G33' => 'lonja', 'Lj1C1187T7' => 'lonja', 'Lj1C843T11' => 'lonja', 'Lj1g0010940' => 'lja', 'Lj2A288T69' => 'lonja', 'Lj3g0024276' => 'lja', 'Lj4A47T76' => 'lonja', 'Lj4g0005805' => 'lja', 'Lj4g0006097' => 'lja', 'Lj4g0008528' => 'lja', 'Lj4g0024907' => 'lja', 'Lj5g0012472' => 'lja', 'Lj5g0018648' => 'lja', 'Lj6C789G1' => 'lonja', 'Lj6g0004000' => 'lja', 'Lj7A292G67' => 'lonja', 'Lj7A292T64' => 'lonja', 'Lj9A400T58' => 'lonja', 'Lsat_1_v5_gn_1_126181' => 'lsa', 'Lsat_1_v5_gn_4_123041' => 'lsa', 'Lsat_1_v5_gn_4_133620' => 'lsa', 'Lsat_1_v5_gn_4_53221' => 'lsa', 'Lsat_1_v5_gn_4_71961' => 'lsa', 'Lsat_1_v5_gn_7_105241' => 'lsa', 'Lsat_1_v5_gn_7_21361' => 'lsa', 'Lsat_1_v5_gn_7_28860' => 'lsa', 'Lsat_1_v5_gn_7_31260' => 'lsa', 'Lsat_1_v5_gn_8_52801' => 'lsa', 'Manes.02G191400' => 'mes', 'Manes.03G110100' => 'mes', 'Manes.04G071100' => 'mes', 'Manes.05G100500' => 'mes', 'Manes.05G164700' => 'mes', 'Manes.15G087000' => 'mes', 'Manes.15G121500' => 'mes', 'Manes.16G028300' => 'mes', 'Manes.17G046100' => 'mes', 'Manes.17G069800' => 'mes', 'Manes.18G100500' => 'mes', 'Mapoly0002s0109' => 'mpo', 'Mapoly0024s0007' => 'mpo', 'Mapoly0089s0032' => 'mpo', 'MBI04_g42241_MAGBIO' => 'mbi', 'MBI05_g11988_MAGBIO' => 'mbi', 'MBI05_g35452_MAGBIO' => 'mbi', 'MBI07_g30179_MAGBIO' => 'mbi', 'MBI07_g35859_MAGBIO' => 'mbi', 'MBI07_g35860_MAGBIO' => 'mbi', 'MBI07_g37166_MAGBIO' => 'mbi', 'MBI08_g18172_MAGBIO' => 'mbi', 'MBI09_g08441_MAGBIO' => 'mbi', 'MBI13_g01676_MAGBIO' => 'mbi', 'MBI14_g42955_MAGBIO' => 'mbi', 'MBI16_g13161_MAGBIO' => 'mbi', 'MBI17_g27204_MAGBIO' => 'mbi', 'MBI19_g21595_MAGBIO' => 'mbi', 'MD00G1148400' => 'mdo', 'MD02G1301200' => 'mdo', 'MD03G1227800' => 'mdo', 'MD05G1041100' => 'mdo', 'MD05G1124800' => 'mdo', 'MD05G1284000' => 'mdo', 'MD05G1338800' => 'mdo', 'MD05G1338900' => 'mdo', 'MD07G1022800' => 'mdo', 'MD10G1047500' => 'mdo', 'MD10G1127500' => 'mdo', 'MD10G1262300' => 'mdo', 'MD10G1293800' => 'mdo', 'MD16G1074300' => 'mdo', 'Medtr1g021670' => 'mtr', 'Medtr1g096320' => 'mtr', 'Medtr2g013690' => 'mtr', 'Medtr2g019450' => 'mtr', 'Medtr2g085170' => 'mtr', 'Medtr4g088785' => 'mtr', 'Medtr8g055930' => 'mtr', 'Medtr8g085850' => 'mtr', 'MELO3C002605.2' => 'cme', 'MELO3C003891.2' => 'cme', 'MELO3C004012.2' => 'cme', 'MELO3C007134.2' => 'cme', 'MELO3C008118.2' => 'cme', 'MELO3C016700.2' => 'cme', 'MELO3C024127.2' => 'cme', 'MELO3C033361.2' => 'cme', 'MELO3C033362.2' => 'cme', 'Migut.C00430' => 'egut', 'Migut.C01246' => 'egut', 'Migut.E00101' => 'egut', 'Migut.H01486' => 'egut', 'Migut.H01939' => 'egut', 'Migut.K00360' => 'egut', 'Migut.M00910' => 'egut', 'Migut.M01139' => 'egut', 'Migut.N02677' => 'egut', 'MSTRG.13252' => 'ama', 'MSTRG.14701' => 'ama', 'MSTRG.1521' => 'ama', 'MSTRG.15884' => 'ama', 'MSTRG.16242' => 'ama', 'MSTRG.22285' => 'ama', 'MSTRG.22444' => 'ama', 'MSTRG.2349' => 'ama', 'MSTRG.26308' => 'ama', 'MSTRG.28296' => 'ama', 'MSTRG.9895' => 'ama', 'Nitab4.5_0000110g0060' => 'nta', 'Nitab4.5_0000420g0130' => 'nta', 'Nitab4.5_0000422g0030' => 'nta', 'Nitab4.5_0000560g0180' => 'nta', 'Nitab4.5_0000703g0100' => 'nta', 'Nitab4.5_0000786g0200' => 'nta', 'Nitab4.5_0001336g0020' => 'nta', 'Nitab4.5_0001796g0030' => 'nta', 'Nitab4.5_0003348g0060' => 'nta', 'Nitab4.5_0003698g0040' => 'nta', 'Nitab4.5_0003942g0090' => 'nta', 'Nitab4.5_0004775g0070' => 'nta', 'Nitab4.5_0004864g0030' => 'nta', 'Nitab4.5_0005615g0020' => 'nta', 'Nitab4.5_0009288g0030' => 'nta', 'Nitab4.5_0009341g0010' => 'nta', 'Nitab4.5_0009535g0010' => 'nta', 'Nn1g03995' => 'nnu', 'Nn1g04100' => 'nnu', 'Nn1g06530' => 'nnu', 'Nn3g16404' => 'nnu', 'Nn3g17212' => 'nnu', 'Nn3g20776' => 'nnu', 'Nn3g21923' => 'nnu', 'Nn5g27737' => 'nnu', 'Nn5g29461' => 'nnu', 'Nn7g38355' => 'nnu', 'Nn8g39873' => 'nnu', 'Oeu000548.2' => 'oeu', 'Oeu004672.1' => 'oeu', 'Oeu015605.2' => 'oeu', 'Oeu016092.1' => 'oeu', 'Oeu017879.3' => 'oeu', 'Oeu024910.1' => 'oeu', 'Oeu028965.1' => 'oeu', 'Oeu031269.1' => 'oeu', 'Oeu031270.1' => 'oeu', 'Oeu032535.1' => 'oeu', 'Oeu034151.1' => 'oeu', 'Oeu034152.1' => 'oeu', 'Oeu034588.2' => 'oeu', 'Oeu050846.1' => 'oeu', 'Oeu050849.2' => 'oeu', 'Oeu051063.2' => 'oeu', 'Oeu052368.1' => 'oeu', 'Oeu052370.1' => 'oeu', 'Os01g0210400' => 'osa', 'Os01g0304300' => 'osa', 'Os01g0749100' => 'osa', 'Os02g0745800' => 'osa', 'Os03g0769050' => 'osa', 'Os05g0531500' => 'osa', 'Os06g0724300' => 'osa', 'Os11g0198100' => 'osa', 'Peaxi162Scf00069g01425' => 'pax', 'Peaxi162Scf00280g00811' => 'pax', 'Peaxi162Scf00310g00615' => 'pax', 'Peaxi162Scf00362g00542' => 'pax', 'Peaxi162Scf00461g00310' => 'pax', 'Peaxi162Scf00530g00118' => 'pax', 'Peaxi162Scf00541g00057' => 'pax', 'Peaxi162Scf00661g00017' => 'pax', 'Peaxi162Scf00926g00027' => 'pax', 'Peaxi162Scf01064g00263' => 'pax', 'Peaxi162Scf01211g00135' => 'pax', 'PGR004G2336' => 'pgr', 'PGR042G0327' => 'pgr', 'PGR042G1957' => 'pgr', 'PGR042G2003' => 'pgr', 'PGR042G3929' => 'pgr', 'PGR083G1137' => 'pgr', 'PGR083G1364' => 'pgr', 'PGSC0003DMG400003381' => 'stu', 'PGSC0003DMG400003417' => 'stu', 'PGSC0003DMG400008981' => 'stu', 'PGSC0003DMG400012417' => 'stu', 'PGSC0003DMG400012823' => 'stu', 'PGSC0003DMG400016885' => 'stu', 'PGSC0003DMG400022812' => 'stu', 'PGSC0003DMG400029726' => 'stu', 'PGSC0003DMG401009243' => 'stu', 'PGSC0003DMG401031505' => 'stu', 'PGSC0003DMG402031505' => 'stu', 'Phvul.001G017600' => 'pvu', 'Phvul.002G193500' => 'pvu', 'Phvul.002G228900' => 'pvu', 'Phvul.002G236800' => 'pvu', 'Phvul.003G049500' => 'pvu', 'Phvul.005G072000' => 'pvu', 'Phvul.006G164800' => 'pvu', 'Phvul.006G185100' => 'pvu', 'Phvul.007G090000' => 'pvu', 'Potri.001G399800' => 'ptr', 'Potri.002G149900' => 'ptr', 'Potri.004G044100' => 'ptr', 'Potri.004G177600' => 'ptr', 'Potri.009G138000' => 'ptr', 'Potri.010G094000' => 'ptr', 'Potri.011G053000' => 'ptr', 'Potri.011G119300' => 'ptr', 'Potri.013G113700' => 'ptr', 'Potri.018G107800' => 'ptr', 'Potri.019G084100' => 'ptr', 'Pp3c14_23720' => 'ppa', 'Pp3c16_6340' => 'ppa', 'Pp3c23_13420' => 'ppa', 'Pp3c24_2740' => 'ppa', 'Pp3c25_860' => 'ppa', 'Pp3c8_21750' => 'ppa', 'Prupe.1G273000' => 'ppe', 'Prupe.1G273700' => 'ppe', 'Prupe.1G274100' => 'ppe', 'Prupe.2G023300' => 'ppe', 'Prupe.4G048000' => 'ppe', 'Prupe.4G080400' => 'ppe', 'Prupe.4G181200' => 'ppe', 'Prupe.8G056900' => 'ppe', 'Prupe.8G168700' => 'ppe', 'Psat1g189080' => 'psa', 'Psat1g204760' => 'psa', 'Psat4g175560' => 'psa', 'Psat4g177720' => 'psa', 'Psat5g244240' => 'psa', 'Psat6g010720' => 'psa', 'Psat6g187200' => 'psa', 'Psat7g072040' => 'psa', 'PSO017G3501' => 'pso', 'PSO063G2148' => 'pso', 'PSO063G5608' => 'pso', 'PSO210G6392' => 'pso', 'PSO541G2319' => 'pso', 'PSO541G2836' => 'pso', 'PSO541G4012' => 'pso', 'PSO541G6253' => 'pso', 'PSO675G0580' => 'pso', 'PSO675G0856' => 'pso', 'PSO675G5635' => 'pso', 'PSO675G9157' => 'pso', 'PSO832G1660' => 'pso', 'PSO832G1969' => 'pso', 'QL02p007186' => 'qlo', 'QL02p033904' => 'qlo', 'QL03p064391' => 'qlo', 'QL05p040593' => 'qlo', 'QL05p058242' => 'qlo', 'QL08p021825' => 'qlo', 'QL11p004981' => 'qlo', 'RcHm_v2.0_Chr1g0318301' => 'rch', 'RcHm_v2.0_Chr4g0418501' => 'rch', 'RcHm_v2.0_Chr4g0439971' => 'rch', 'RcHm_v2.0_Chr5g0008541' => 'rch', 'RcHm_v2.0_Chr5g0014101' => 'rch', 'RcHm_v2.0_Chr5g0014131' => 'rch', 'RcHm_v2.0_Chr5g0033621' => 'rch', 'RcHm_v2.0_Chr6g0272041' => 'rch', 'RcHm_v2.0_Chr6g0278831' => 'rch', 'Rhsim02G0130400' => 'rsi', 'Rhsim02G0171100' => 'rsi', 'Rhsim05G0053000' => 'rsi', 'Rhsim05G0053100' => 'rsi', 'Rhsim06G0096500' => 'rsi', 'Rhsim06G0096600' => 'rsi', 'Rhsim06G0199100' => 'rsi', 'Rhsim12G0062300' => 'rsi', 'Rhsim12G0062800' => 'rsi', 'Sabra02G0118600' => 'sbr', 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'Solyc03g079860.2' => 'sly', 'Solyc04g079770.3' => 'sly', 'Solyc05g007430.4' => 'sly', 'Solyc07g063150.3' => 'sly', 'Solyc08g016620.3' => 'sly', 'Solyc09g057590.3' => 'sly', 'Solyc09g057600.1' => 'sly', 'Solyc10g009050.3' => 'sly', 'Solyc11g017420.2' => 'sly', 'Sopen01g053810' => 'spe', 'Sopen02g023040' => 'spe', 'Sopen03g002440' => 'spe', 'Sopen04g033350' => 'spe', 'Sopen05g003310' => 'spe', 'Sopen07g004050' => 'spe', 'Sopen07g031340' => 'spe', 'Sopen08g006990' => 'spe', 'Sopen10g004830' => 'spe', 'Sopen11g009370' => 'spe', 'Sp1g24450' => 'spa', 'Sp1g29670' => 'spa', 'Sp1g39600' => 'spa', 'Sp2g11080' => 'spa', 'Sp2g13970' => 'spa', 'Sp4g16130' => 'spa', 'Sp6g13080' => 'spa', 'Sp7g37270' => 'spa', 'TAR371G0065' => 'tar', 'TAR376G0340' => 'tar', 'TAR376G0435' => 'tar', 'TAR381G0002' => 'tar', 'TAR381G1236' => 'tar', 'TAR624G0055' => 'tar', 'TAR624G0324' => 'tar', 'TAR624G0696' => 'tar', 'TAR624G0906' => 'tar', 'TAR625G0107' => 'tar', 'TAR626G0015' => 'tar', 'TAR626G1356' => 'tar', 'TAR627G0888' => 'tar', 'TAR628G0399' => 'tar', 'TAR628G1327' => 'tar', 'TAR629G2831' => 'tar', 'TAR629G2874' => 'tar', 'TAR633G1432' => 'tar', 'TAR633G2771' => 'tar', 'THA.LOC104803394' => 'tha', 'THA.LOC104805153' => 'tha', 'THA.LOC104806784' => 'tha', 'THA.LOC104810473' => 'tha', 'THA.LOC104813100' => 'tha', 'THA.LOC104814215' => 'tha', 'THA.LOC104815554' => 'tha', 'THA.LOC104820544' => 'tha', 'THA.LOC104824754' => 'tha', 'THA.LOC104827717' => 'tha', 'Thecc.02G031400' => 'tca', 'Thecc.02G055900' => 'tca', 'Thecc.02G350800' => 'tca', 'Thecc.06G150900' => 'tca', 'Thecc.06G186600' => 'tca', 'Thecc.07G089600' => 'tca', 'Thecc.08G020400' => 'tca', 'Thecc.08G182100' => 'tca', 'Thhalv10000873m.g' => 'esa', 'Thhalv10004185m.g' => 'esa', 'Thhalv10006981m.g' => 'esa', 'Thhalv10007204m.g' => 'esa', 'Thhalv10011374m.g' => 'esa', 'Thhalv10013482m.g' => 'esa', 'Thhalv10017801m.g' => 'esa', 'Thhalv10024983m.g' => 'esa', 'TPR.G12072' => 'tpr', 'TPR.G15769' => 'tpr', 'TPR.G16504' => 'tpr', 'TPR.G16506' => 'tpr', 'TPR.G24345' => 'tpr', 'TPR.G26666' => 'tpr', 'TPR.G27320' => 'tpr', 'TPR.G31819' => 'tpr', 'TPR.G38879' => 'tpr', 'TPR.G39015' => 'tpr', 'TPR.G8819' => 'tpr', 'TWI09G0924' => 'twi', 'TWI12G0811' => 'twi', 'TWI12G1294' => 'twi', 'TWI31G0150' => 'twi', 'TWI36G1262' => 'twi', 'TWI38G1287' => 'twi', 'TWI38G1633' => 'twi', 'TWI38G1982' => 'twi', 'TWI39G0116' => 'twi', 'TWI60G1011' => 'twi', 'TWI63G0171' => 'twi', 'TWI73G0839' => 'twi', 'TWI79G1511' => 'twi', 'unitig_0.g915' => 'ugi', 'unitig_0.g916' => 'ugi', 'unitig_21.g20219' => 'ugi', 'unitig_21.g20416' => 'ugi', 'unitig_578.g16132' => 'ugi', 'unitig_578.g16718' => 'ugi', 'unitig_62.g23481' => 'ugi', 'unitig_744.g24535' => 'ugi', 'unitig_749.g13525' => 'ugi', 'vmacro01248' => 'vma', 'vmacro02290' => 'vma', 'vmacro10946' => 'vma', 'vmacro11865' => 'vma', 'vmacro12493' => 'vma', 'vmacro17322' => 'vma', 'vmacro21599' => 'vma', 'vmacro23041' => 'vma', 'VMungo0251G0004' => 'vmu', 'VMungo0251G2639' => 'vmu', 'VMungo0251G2967' => 'vmu', 'VMungo0540G0864' => 'vmu', 'VMungo0540G1569' => 'vmu', 'VMungo0647G0317' => 'vmu', 'VMungo0720G1373' => 'vmu', 'VMungo0720G1508' => 'vmu', 'VMungo1080G0485' => 'vmu', 'VMungo1215G3177' => 'vmu', 'Zm00001eb112600' => 'zma', 'Zm00001eb120220' => 'zma', 'Zm00001eb153240' => 'zma', 'Zm00001eb168880' => 'zma', 'Zm00001eb213920' => 'zma', 'Zm00001eb228280' => 'zma', 'Zm00001eb254580' => 'zma', 'Zm00001eb272180' => 'zma', 'Zm00001eb293190' => 'zma', 'Zm00001eb322930' => 'zma', 'Zm00001eb353360' => 'zma', 'Zm00001eb353390' => 'zma', 'Zm00001eb353430' => 'zma', 'Zm00001eb353440' => 'zma', 'Zm00001eb353780' => 'zma' ), 'gf_id' => 'HOM05D000499', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000499' ), 'data_identifier' => 'HOM05D000499', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000499', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1066', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p29780' => 'bna', 'A02p33180' => 'bna', 'A03p16470' => 'bna', 'A03p66010' => 'bna', 'A04p25970' => 'bna', 'A06p01270' => 'bna', 'A06p46080' => 'bna', 'A07p11400' => 'bna', 'A08p01840' => 'bna', 'A08p08230' => 'bna', 'A08p25740' => 'bna', 'A09p32070' => 'bna', 'A09p37830' => 'bna', 'A09p42840' => 'bna', 'A09p42850' => 'bna', 'Aa31LG10G2060' => 'aar', 'Aa31LG2G7410' => 'aar', 'Aa31LG6G10200' => 'aar', 'Aa31LG6G16680' => 'aar', 'Aa31LG6G8470' => 'aar', 'Aa31LG9G12730' => 'aar', 'Aa31LG9G13680' => 'aar', 'Aa31LG9G14920' => 'aar', 'Aa31LG9G6650' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4977' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5467' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3254' => 'aag', 'Actinidia02578' => 'ach', 'Actinidia07693' => 'ach', 'Actinidia08413' => 'ach', 'Actinidia08414' => 'ach', 'Actinidia15289' => 'ach', 'Actinidia19871' => 'ach', 'Actinidia21475' => 'ach', 'Actinidia22576' => 'ach', 'Actinidia28327' => 'ach', 'Actinidia32491' => 'ach', 'Actinidia39463' => 'ach', 'Actinidia39571' => 'ach', 'Ah.01g013750' => 'amhyb', 'Ah.01g023210' => 'amhyb', 'Ah.04g164850' => 'amhyb', 'Ah.05g178060' => 'amhyb', 'Ah.07g204270' => 'amhyb', 'Ah.07g208480' => 'amhyb', 'Ah.09g237410' => 'amhyb', 'Ah.14g089460' => 'amhyb', 'AL1G41790' => 'aly', 'AL1G49050' => 'aly', 'AL1G53810' => 'aly', 'AL1G61400' => 'aly', 'AL4G18580' => 'aly', 'AL5G12510' => 'aly', 'AL5G12540' => 'aly', 'AL6G43230' => 'aly', 'AL7G10370' => 'aly', 'AL7G19250' => 'aly', 'AL8G12240' => 'aly', 'AL8G18540' => 'aly', 'Aqoxy1G02409' => 'aox', 'Aqoxy2G03993' => 'aox', 'Aqoxy3G03357' => 'aox', 'Aqoxy4G00785' => 'aox', 'Aqoxy5G02598' => 'aox', 'Aqoxy6G00132' => 'aox', 'Aqoxy7G01776' => 'aox', 'Aqoxy7G02316' => 'aox', 'Aqoxy7G03973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.12AFKW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B8730' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27IQR1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3F75VG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3RE0GA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41TCQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.527VTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FIR39' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5W8UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DA38EV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ63HS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H1I32C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HC27T5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4M8AP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7N3CZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9UVDZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LS1NQA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT1D4B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SKC4TM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCFV76' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF9Q1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQWD9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1ZM88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WE07RT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YCK7VH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJE6Q6' => 'arhy', 'AT1G28240' => 'ath', 'AT1G34550' => 'ath', 'AT1G53040' => 'ath', 'AT2G02910' => 'ath', 'AT4G09630' => 'ath', 'AT4G38500' => 'ath', 'AT5G42660' => 'ath', 'AT5G46220' => 'ath', 'ATR0152G026' => 'atr', 'ATR0564G343' => 'atr', 'ATR0706G151' => 'atr', 'ATR0733G207' => 'atr', 'ATR0751G234' => 'atr', 'ATR0807G048' => 'atr', 'ATR1091G084' => 'atr', 'Atru.chr10.1229' => 'acertr', 'Atru.chr10.1230' => 'acertr', 'Atru.chr10.1874' => 'acertr', 'Atru.chr11.1808' => 'acertr', 'Atru.chr13.1795' => 'acertr', 'Atru.chr13.570' => 'acertr', 'Atru.chr2.2608' => 'acertr', 'Atru.chr2.2609' => 'acertr', 'Atru.chr5.3428' => 'acertr', 'Atru.chr8.1171' => 'acertr', 'AUR62004651' => 'cqu', 'AUR62008675' => 'cqu', 'AUR62010014' => 'cqu', 'AUR62013004' => 'cqu', 'AUR62014825' => 'cqu', 'AUR62015015' => 'cqu', 'AUR62015151' => 'cqu', 'AUR62017020' => 'cqu', 'AUR62019422' => 'cqu', 'AUR62023570' => 'cqu', 'AUR62025571' => 'cqu', 'AUR62029098' => 'cqu', 'AUR62033863' => 'cqu', 'AUR62034296' => 'cqu', 'AUR62040075' => 'cqu', 'BcaB02g07334' => 'bca', 'BcaB02g10575' => 'bca', 'BcaB03g12119' => 'bca', 'BcaB03g12120' => 'bca', 'BcaB03g13945' => 'bca', 'BcaB04g17123' => 'bca', 'BcaB04g17867' => 'bca', 'BcaB04g19839' => 'bca', 'BcaB07g30317' => 'bca', 'BcaB07g32432' => 'bca', 'BcaB07g33362' => 'bca', 'BcaB08g36611' => 'bca', 'BcaC01g00028' => 'bca', 'BcaC01g01356' => 'bca', 'BcaC01g02034' => 'bca', 'BcaC01g06051' => 'bca', 'BcaC03g16839' => 'bca', 'BcaC03g17176' => 'bca', 'BcaC05g26829' => 'bca', 'BcaC06g31490' => 'bca', 'BcaC06g35344' => 'bca', 'BcaC06g36570' => 'bca', 'BcaC07g37537' => 'bca', 'BcaC08g43491' => 'bca', 'BcaC08g43773' => 'bca', 'BcaNung00234' => 'bca', 'BcaNung01982' => 'bca', 'BcaNung03707' => 'bca', 'BcaNung06454' => 'bca', 'BolC2t10762H' => 'bol', 'BolC2t11191H' => 'bol', 'BolC3t14322H' => 'bol', 'BolC3t19747H' => 'bol', 'BolC3t21425H' => 'bol', 'BolC4t27800H' => 'bol', 'BolC5t31423H' => 'bol', 'BolC6t35951H' => 'bol', 'BolC6t36282H' => 'bol', 'BolC7t40678H' => 'bol', 'BolC7t40679H' => 'bol', 'BolC7t42222H' => 'bol', 'BolC7t43492H' => 'bol', 'BolC7t46785H' => 'bol', 'BolC8t47853H' => 'bol', 'BolC9t56805H' => 'bol', 'BraA02t08000Z' => 'bra', 'BraA02t08341Z' => 'bra', 'BraA03t10936Z' => 'bra', 'BraA03t15657Z' => 'bra', 'BraA04t18100Z' => 'bra', 'BraA05t20523Z' => 'bra', 'BraA06t23353Z' => 'bra', 'BraA06t27473Z' => 'bra', 'BraA06t27769Z' => 'bra', 'BraA07t28928Z' => 'bra', 'BraA08t32236Z' => 'bra', 'BraA08t32841Z' => 'bra', 'BraA08t34524Z' => 'bra', 'BraA09t38742Z' => 'bra', 'BraA09t39295Z' => 'bra', 'C02p47180' => 'bna', 'C02p50990' => 'bna', 'C03p19360' => 'bna', 'C03p74950' => 'bna', 'C03p91000' => 'bna', 'C04p63260' => 'bna', 'C05p27050' => 'bna', 'C06p08750' => 'bna', 'C06p11490' => 'bna', 'C07p02820' => 'bna', 'C07p17180' => 'bna', 'C07p29440' => 'bna', 'C07p63730' => 'bna', 'C09p39260' => 'bna', 'CAN.G1164.34' => 'can', 'CAN.G1164.39' => 'can', 'CAN.G1530.3' => 'can', 'CAN.G162.61' => 'can', 'CAN.G176.6' => 'can', 'CAN.G289.49' => 'can', 'CAN.G370.21' => 'can', 'CAN.G370.22' => 'can', 'CAN.G371.117' => 'can', 'CAN.G58.37' => 'can', 'CAN.G588.98' => 'can', 'CANSAT21G2266' => 'cansat', 'CANSAT25G2799' => 'cansat', 'CANSAT35G0862' => 'cansat', 'CANSAT35G1704' => 'cansat', 'CANSAT35G1760' => 'cansat', 'CANSAT56G3971' => 'cansat', 'CANSAT56G4116' => 'cansat', 'CANSAT80G1259' => 'cansat', 'CARHR027730' => 'chi', 'CARHR033880' => 'chi', 'CARHR043270' => 'chi', 'CARHR145330' => 'chi', 'CARHR145340' => 'chi', 'CARHR175570' => 'chi', 'CARHR181570' => 'chi', 'CARHR258470' => 'chi', 'CARHR260490' => 'chi', 'CARHR294220' => 'chi', 'Carub.0001s2668' => 'cru', 'Carub.0001s3257' => 'cru', 'Carub.0001s4220' => 'cru', 'Carub.0005s0179' => 'cru', 'Carub.0006s2807' => 'cru', 'Carub.0007s0039' => 'cru', 'Carub.0008s0169' => 'cru', 'Carub.0008s0636' => 'cru', 'Ca_00338_v3' => 'car', 'Ca_00542_v3' => 'car', 'Ca_01844_v3' => 'car', 'Ca_10611_v3' => 'car', 'Ca_13326_v3' => 'car', 'Ca_17944_v3' => 'car', 'Ca_18546_v3' => 'car', 'Ca_24219_v3' => 'car', 'Ca_29972_v3' => 'car', 'CBR_g3681' => 'cbr', 'CBR_g40021' => 'cbr', 'Cc01_g08140' => 'ccan', 'Cc02_g13410' => 'ccan', 'Cc02_g37480' => 'ccan', 'Cc05_g12030' => 'ccan', 'Cc09_g03370' => 'ccan', 'Cc09_g10300' => 'ccan', 'Cc10_g03530' => 'ccan', 'Cc10_g11380' => 'ccan', 'CDE01G0176' => 'cde', 'CDE02G0675' => 'cde', 'CDE02G0942' => 'cde', 'CDE02G1153' => 'cde', 'CDE02G4177' => 'cde', 'CDE04G2117' => 'cde', 'CDE04G2736' => 'cde', 'CDE08G1161' => 'cde', 'CDE09G1238' => 'cde', 'Cfa000467' => 'cfa', 'Cfa000947' => 'cfa', 'Cfa004969' => 'cfa', 'Cfa005284' => 'cfa', 'Cfa008993' => 'cfa', 'Cfa018187' => 'cfa', 'Cfa018454' => 'cfa', 'Cfa020585' => 'cfa', 'Ciclev10000424m.g' => 'ccl', 'Ciclev10003605m.g' => 'ccl', 'Ciclev10007828m.g' => 'ccl', 'Ciclev10014620m.g' => 'ccl', 'Ciclev10015169m.g' => 'ccl', 'Ciclev10018291m.g' => 'ccl', 'Ciclev10028256m.g' => 'ccl', 'Ciclev10033822m.g' => 'ccl', 'CiPaw.05G060300' => 'cil', 'CiPaw.05G085000' => 'cil', 'CiPaw.06G083700' => 'cil', 'CiPaw.06G120300' => 'cil', 'CiPaw.09G060500' => 'cil', 'CiPaw.09G123800' => 'cil', 'CiPaw.11G169700' => 'cil', 'CiPaw.12G118300' => 'cil', 'CiPaw.15G071000' => 'cil', 'CiPaw.15G081900' => 'cil', 'ClCG01G024610' => 'cla', 'ClCG03G006070' => 'cla', 'ClCG05G019250' => 'cla', 'ClCG09G009500' => 'cla', 'ClCG11G008200' => 'cla', 'ClCG11G018080' => 'cla', 'COL.COLO4_17373' => 'col', 'COL.COLO4_22994' => 'col', 'COL.COLO4_26389' => 'col', 'COL.COLO4_27170' => 'col', 'COL.COLO4_31074' => 'col', 'COL.COLO4_31465' => 'col', 'COL.COLO4_36438' => 'col', 'COL.COLO4_36439' => 'col', 'Cpa.g.c38781' => 'cpa', 'Cpa.g.sc128.12' => 'cpa', 'Cpa.g.sc166.7' => 'cpa', 'Cpa.g.sc166.8' => 'cpa', 'Cpa.g.sc20.111' => 'cpa', 'Cpa.g.sc27.31' => 'cpa', 'Cpa.g.sc64.36' => 'cpa', 'Cpa.g.sc64.37' => 'cpa', 'Cpa.g.sc66.49' => 'cpa', 'Cpa.g.sc80.64' => 'cpa', 'CsaV3_1G012320' => 'csa', 'CsaV3_2G008480' => 'csa', 'CsaV3_2G033450' => 'csa', 'CsaV3_3G044830' => 'csa', 'CsaV3_4G033710' => 'csa', 'CsaV3_6G051730' => 'csa', 'CsaV3_7G025350' => 'csa', 'CSS0001067' => 'camsi', 'CSS0005996' => 'camsi', 'CSS0006590' => 'camsi', 'CSS0009673' => 'camsi', 'CSS0010201' => 'camsi', 'CSS0010549' => 'camsi', 'CSS0011364' => 'camsi', 'CSS0014473' => 'camsi', 'CSS0014961' => 'camsi', 'CSS0020191' => 'camsi', 'CSS0021165' => 'camsi', 'CSS0022306' => 'camsi', 'CSS0030591' => 'camsi', 'CSS0030696' => 'camsi', 'CSS0032653' => 'camsi', 'CSS0037487' => 'camsi', 'CSS0041102' => 'camsi', 'CSS0041261' => 'camsi', 'CSS0046246' => 'camsi', 'CSS0049256' => 'camsi', 'DCAR_004075' => 'dca', 'DCAR_011538' => 'dca', 'DCAR_019553' => 'dca', 'DCAR_020952' => 'dca', 'DCAR_021739' => 'dca', 'DCAR_027407' => 'dca', 'DCAR_027913' => 'dca', 'DCAR_028066' => 'dca', 'Dinv05899' => 'din', 'Dinv07563' => 'din', 'Dinv08010' => 'din', 'Dinv14125' => 'din', 'Dinv20172' => 'din', 'Dinv30743' => 'din', 'Dinv31229' => 'din', 'Dinv34162' => 'din', 'Dinv36028' => 'din', 'Dinv39368' => 'din', 'Dinv40565' => 'din', 'Dinv41706' => 'din', 'Duzib052G0089' => 'dzi', 'Duzib116G0641' => 'dzi', 'Duzib132G0069' => 'dzi', 'Duzib132G1219' => 'dzi', 'Duzib147G0278' => 'dzi', 'Duzib160G0480' => 'dzi', 'Duzib170G0661' => 'dzi', 'Duzib177G0591' => 'dzi', 'Duzib187G1353' => 'dzi', 'Duzib192G0858' => 'dzi', 'Duzib192G0883' => 'dzi', 'Duzib213G0506' => 'dzi', 'Duzib235G0289' => 'dzi', 'Duzib251G0422' => 'dzi', 'ECA232G3898' => 'eca', 'ECA233G5950' => 'eca', 'ECA234G1699' => 'eca', 'ECA234G2421' => 'eca', 'ECA236G0426' => 'eca', 'ECA236G4331' => 'eca', 'ECA248G2573' => 'eca', 'EL10Ac1g00077' => 'bvu', 'EL10Ac1g01746' => 'bvu', 'EL10Ac2g03464' => 'bvu', 'EL10Ac4g08176' => 'bvu', 'EL10Ac7g17521' => 'bvu', 'EL10Ac8g20386' => 'bvu', 'EL10Ac9g21343' => 'bvu', 'EL10Ac9g22688' => 'bvu', 'Eucgr.B03434' => 'egr', 'Eucgr.D00618' => 'egr', 'Eucgr.E02395' => 'egr', 'Eucgr.F01129' => 'egr', 'Eucgr.F02622' => 'egr', 'Eucgr.F04207' => 'egr', 'FAN01G0570' => 'fan', 'FAN03G3351' => 'fan', 'FAN06G3702' => 'fan', 'FAN07G2149' => 'fan', 'FAN10G3758' => 'fan', 'FAN11G1170' => 'fan', 'FAN11G2050' => 'fan', 'FAN11G2724' => 'fan', 'FAN12G1700' => 'fan', 'FAN12G2028' => 'fan', 'FAN15G1160' => 'fan', 'FAN15G3063' => 'fan', 'FAN16G2540' => 'fan', 'FAN16G3077' => 'fan', 'FAN16G3624' => 'fan', 'FAN17G0221' => 'fan', 'FAN20G2492' => 'fan', 'FAN20G2905' => 'fan', 'FAN21G0548' => 'fan', 'FAN21G1300' => 'fan', 'FAN22G0077' => 'fan', 'FAN22G1315' => 'fan', 'FAN24G1280' => 'fan', 'FAN24G1445' => 'fan', 'FAN24G3527' => 'fan', 'FAN25G0464' => 'fan', 'FAN25G2885' => 'fan', 'FAN25G3270' => 'fan', 'FAN27G1101' => 'fan', 'FAN27G2846' => 'fan', 'FAN27G3524' => 'fan', 'FvH4_2g11770' => 'fve', 'FvH4_2g15630' => 'fve', 'FvH4_3g05570' => 'fve', 'FvH4_3g09110' => 'fve', 'FvH4_3g19940' => 'fve', 'FvH4_4g04821' => 'fve', 'FvH4_4g31480' => 'fve', 'FvH4_7g01740' => 'fve', 'Glyma.05G130400' => 'gma', 'Glyma.05G156400' => 'gma', 'Glyma.07G197000' => 'gma', 'Glyma.08G085151' => 'gma', 'Glyma.08G114500' => 'gma', 'Glyma.08G300400' => 'gma', 'Glyma.10G215800' => 'gma', 'Glyma.12G224400' => 'gma', 'Glyma.13G179300' => 'gma', 'Glyma.13G218151' => 'gma', 'Glyma.13G238800' => 'gma', 'Glyma.13G276900' => 'gma', 'Glyma.14G078200' => 'gma', 'Glyma.15G074500' => 'gma', 'Glyma.15G094100' => 'gma', 'Glyma.17G247200' => 'gma', 'Glyma.18G120100' => 'gma', 'Glyma.20G176000' => 'gma', 'Gohir.A01G063600' => 'ghi', 'Gohir.A01G170301' => 'ghi', 'Gohir.A02G060500' => 'ghi', 'Gohir.A05G133850' => 'ghi', 'Gohir.A05G161400' => 'ghi', 'Gohir.A06G012900' => 'ghi', 'Gohir.A06G035901' => 'ghi', 'Gohir.A06G127100' => 'ghi', 'Gohir.A06G210500' => 'ghi', 'Gohir.A08G008650' => 'ghi', 'Gohir.A09G072700' => 'ghi', 'Gohir.A09G088301' => 'ghi', 'Gohir.A10G040600' => 'ghi', 'Gohir.A12G036300' => 'ghi', 'Gohir.A12G143350' => 'ghi', 'Gohir.A12G165500' => 'ghi', 'Gohir.A13G145700' => 'ghi', 'Gohir.D01G050000' => 'ghi', 'Gohir.D01G051366' => 'ghi', 'Gohir.D01G161350' => 'ghi', 'Gohir.D02G065900' => 'ghi', 'Gohir.D05G164200' => 'ghi', 'Gohir.D05G355500' => 'ghi', 'Gohir.D06G010400' => 'ghi', 'Gohir.D06G111250' => 'ghi', 'Gohir.D06G132000' => 'ghi', 'Gohir.D06G210500' => 'ghi', 'Gohir.D07G165675' => 'ghi', 'Gohir.D08G062240' => 'ghi', 'Gohir.D08G086101' => 'ghi', 'Gohir.D08G138060' => 'ghi', 'Gohir.D09G072300' => 'ghi', 'Gohir.D10G041400' => 'ghi', 'Gohir.D11G191020' => 'ghi', 'Gohir.D11G212066' => 'ghi', 'Gohir.D12G036300' => 'ghi', 'Gohir.D12G168600' => 'ghi', 'Gohir.D13G150600' => 'ghi', 'Gorai.001G057300' => 'gra', 'Gorai.002G069900' => 'gra', 'Gorai.002G200000' => 'gra', 'Gorai.003G067600' => 'gra', 'Gorai.005G074800' => 'gra', 'Gorai.006G087300' => 'gra', 'Gorai.008G037500' => 'gra', 'Gorai.008G181400' => 'gra', 'Gorai.009G169400' => 'gra', 'Gorai.009G387900' => 'gra', 'Gorai.010G013300' => 'gra', 'Gorai.010G153800' => 'gra', 'Gorai.010G255800' => 'gra', 'Gorai.011G043700' => 'gra', 'Gorai.011G198900' => 'gra', 'Gorai.013G168400' => 'gra', 'GSVIVG01005212001' => 'vvi', 'GSVIVG01006163001' => 'vvi', 'GSVIVG01009625001' => 'vvi', 'GSVIVG01014338001' => 'vvi', 'GSVIVG01020005001' => 'vvi', 'GSVIVG01021450001' => 'vvi', 'GSVIVG01023975001' => 'vvi', 'GSVIVG01034490001' => 'vvi', 'HanXRQChr04g0112071' => 'han', 'HanXRQChr05g0131151' => 'han', 'HanXRQChr09g0262371' => 'han', 'HanXRQChr09g0268401' => 'han', 'HanXRQChr10g0279241' => 'han', 'HanXRQChr10g0297961' => 'han', 'HanXRQChr11g0326231' => 'han', 'HanXRQChr11g0328471' => 'han', 'HanXRQChr16g0507941' => 'han', 'HanXRQChr17g0560211' => 'han', 'Haze_02108' => 'cav', 'Haze_02428' => 'cav', 'Haze_05593' => 'cav', 'Haze_06448' => 'cav', 'Haze_09427' => 'cav', 'Haze_12022' => 'cav', 'Haze_17612' => 'cav', 'Haze_17928' => 'cav', 'Hma1.2p1_0032F.1_g019250' => 'hma', 'Hma1.2p1_0163F.1_g072690' => 'hma', 'Hma1.2p1_0265F.1_g106710' => 'hma', 'Hma1.2p1_0286F.1_g113970' => 'hma', 'Hma1.2p1_0363F.1_g136640' => 'hma', 'Hma1.2p1_0584F.1_g183470' => 'hma', 'Hma1.2p1_0885F.1_g232570' => 'hma', 'HPP92_006022' => 'vpl', 'HPP92_007320' => 'vpl', 'HPP92_011521' => 'vpl', 'HPP92_019387' => 'vpl', 'HPP92_024038' => 'vpl', 'Hund05891' => 'sun', 'Hund06450' => 'sun', 'Hund12053' => 'sun', 'Hund16800' => 'sun', 'Hund21222' => 'sun', 'Hund22896' => 'sun', 'Hund23746' => 'sun', 'Hund27083' => 'sun', 'Lalb_Chr02g0141831' => 'lal', 'Lalb_Chr02g0141841' => 'lal', 'Lalb_Chr05g0220411' => 'lal', 'Lalb_Chr06g0162081' => 'lal', 'Lalb_Chr09g0327651' => 'lal', 'Lalb_Chr13g0295051' => 'lal', 'Lalb_Chr15g0086801' => 'lal', 'Lalb_Chr16g0383781' => 'lal', 'Lalb_Chr16g0383791' => 'lal', 'Lalb_Chr18g0055441' => 'lal', 'Lalb_Chr18g0059611' => 'lal', 'Lalb_Chr20g0109661' => 'lal', 'Lalb_Chr20g0109831' => 'lal', 'Lalb_Chr20g0121871' => 'lal', 'Lalb_Chr22g0355361' => 'lal', 'Lalb_Chr25g0286371' => 'lal', 'Lj1A1187G43' => 'lonja', 'Lj1A1205T50' => 'lonja', 'Lj1A800G33' => 'lonja', 'Lj1C1187T7' => 'lonja', 'Lj1C843T11' => 'lonja', 'Lj1g0010940' => 'lja', 'Lj2A288T69' => 'lonja', 'Lj3g0024276' => 'lja', 'Lj4A47T76' => 'lonja', 'Lj4g0005805' => 'lja', 'Lj4g0006097' => 'lja', 'Lj4g0008528' => 'lja', 'Lj4g0024907' => 'lja', 'Lj5g0012472' => 'lja', 'Lj5g0018648' => 'lja', 'Lj6C789G1' => 'lonja', 'Lj6g0004000' => 'lja', 'Lj7A292G67' => 'lonja', 'Lj7A292T64' => 'lonja', 'Lj9A400T58' => 'lonja', 'Lsat_1_v5_gn_1_126181' => 'lsa', 'Lsat_1_v5_gn_4_123041' => 'lsa', 'Lsat_1_v5_gn_4_133620' => 'lsa', 'Lsat_1_v5_gn_4_53221' => 'lsa', 'Lsat_1_v5_gn_4_71961' => 'lsa', 'Lsat_1_v5_gn_7_105241' => 'lsa', 'Lsat_1_v5_gn_7_21361' => 'lsa', 'Lsat_1_v5_gn_7_28860' => 'lsa', 'Lsat_1_v5_gn_7_31260' => 'lsa', 'Lsat_1_v5_gn_8_52801' => 'lsa', 'Manes.02G191400' => 'mes', 'Manes.03G110100' => 'mes', 'Manes.04G071100' => 'mes', 'Manes.05G100500' => 'mes', 'Manes.05G164700' => 'mes', 'Manes.15G087000' => 'mes', 'Manes.15G121500' => 'mes', 'Manes.16G028300' => 'mes', 'Manes.17G046100' => 'mes', 'Manes.17G069800' => 'mes', 'Manes.18G100500' => 'mes', 'Mapoly0002s0109' => 'mpo', 'Mapoly0024s0007' => 'mpo', 'Mapoly0089s0032' => 'mpo', 'MBI04_g42241_MAGBIO' => 'mbi', 'MBI05_g11988_MAGBIO' => 'mbi', 'MBI05_g35452_MAGBIO' => 'mbi', 'MBI07_g30179_MAGBIO' => 'mbi', 'MBI07_g35859_MAGBIO' => 'mbi', 'MBI07_g35860_MAGBIO' => 'mbi', 'MBI07_g37166_MAGBIO' => 'mbi', 'MBI08_g18172_MAGBIO' => 'mbi', 'MBI09_g08441_MAGBIO' => 'mbi', 'MBI13_g01676_MAGBIO' => 'mbi', 'MBI14_g42955_MAGBIO' => 'mbi', 'MBI16_g13161_MAGBIO' => 'mbi', 'MBI17_g27204_MAGBIO' => 'mbi', 'MBI19_g21595_MAGBIO' => 'mbi', 'MD00G1148400' => 'mdo', 'MD02G1301200' => 'mdo', 'MD03G1227800' => 'mdo', 'MD05G1041100' => 'mdo', 'MD05G1124800' => 'mdo', 'MD05G1284000' => 'mdo', 'MD05G1338800' => 'mdo', 'MD05G1338900' => 'mdo', 'MD07G1022800' => 'mdo', 'MD10G1047500' => 'mdo', 'MD10G1127500' => 'mdo', 'MD10G1262300' => 'mdo', 'MD10G1293800' => 'mdo', 'MD16G1074300' => 'mdo', 'Medtr1g021670' => 'mtr', 'Medtr1g096320' => 'mtr', 'Medtr2g013690' => 'mtr', 'Medtr2g019450' => 'mtr', 'Medtr2g085170' => 'mtr', 'Medtr4g088785' => 'mtr', 'Medtr8g055930' => 'mtr', 'Medtr8g085850' => 'mtr', 'MELO3C002605.2' => 'cme', 'MELO3C003891.2' => 'cme', 'MELO3C004012.2' => 'cme', 'MELO3C007134.2' => 'cme', 'MELO3C008118.2' => 'cme', 'MELO3C016700.2' => 'cme', 'MELO3C024127.2' => 'cme', 'MELO3C033361.2' => 'cme', 'MELO3C033362.2' => 'cme', 'Migut.C00430' => 'egut', 'Migut.C01246' => 'egut', 'Migut.E00101' => 'egut', 'Migut.H01486' => 'egut', 'Migut.H01939' => 'egut', 'Migut.K00360' => 'egut', 'Migut.M00910' => 'egut', 'Migut.M01139' => 'egut', 'Migut.N02677' => 'egut', 'MSTRG.13252' => 'ama', 'MSTRG.14701' => 'ama', 'MSTRG.1521' => 'ama', 'MSTRG.15884' => 'ama', 'MSTRG.16242' => 'ama', 'MSTRG.22285' => 'ama', 'MSTRG.22444' => 'ama', 'MSTRG.2349' => 'ama', 'MSTRG.26308' => 'ama', 'MSTRG.28296' => 'ama', 'MSTRG.9895' => 'ama', 'Nitab4.5_0000110g0060' => 'nta', 'Nitab4.5_0000420g0130' => 'nta', 'Nitab4.5_0000422g0030' => 'nta', 'Nitab4.5_0000560g0180' => 'nta', 'Nitab4.5_0000703g0100' => 'nta', 'Nitab4.5_0000786g0200' => 'nta', 'Nitab4.5_0001336g0020' => 'nta', 'Nitab4.5_0001796g0030' => 'nta', 'Nitab4.5_0003348g0060' => 'nta', 'Nitab4.5_0003698g0040' => 'nta', 'Nitab4.5_0003942g0090' => 'nta', 'Nitab4.5_0004775g0070' => 'nta', 'Nitab4.5_0004864g0030' => 'nta', 'Nitab4.5_0005615g0020' => 'nta', 'Nitab4.5_0009288g0030' => 'nta', 'Nitab4.5_0009341g0010' => 'nta', 'Nitab4.5_0009535g0010' => 'nta', 'Nn1g03995' => 'nnu', 'Nn1g04100' => 'nnu', 'Nn1g06530' => 'nnu', 'Nn3g16404' => 'nnu', 'Nn3g17212' => 'nnu', 'Nn3g20776' => 'nnu', 'Nn3g21923' => 'nnu', 'Nn5g27737' => 'nnu', 'Nn5g29461' => 'nnu', 'Nn7g38355' => 'nnu', 'Nn8g39873' => 'nnu', 'Oeu000548.2' => 'oeu', 'Oeu004672.1' => 'oeu', 'Oeu015605.2' => 'oeu', 'Oeu016092.1' => 'oeu', 'Oeu017879.3' => 'oeu', 'Oeu024910.1' => 'oeu', 'Oeu028965.1' => 'oeu', 'Oeu031269.1' => 'oeu', 'Oeu031270.1' => 'oeu', 'Oeu032535.1' => 'oeu', 'Oeu034151.1' => 'oeu', 'Oeu034152.1' => 'oeu', 'Oeu034588.2' => 'oeu', 'Oeu050846.1' => 'oeu', 'Oeu050849.2' => 'oeu', 'Oeu051063.2' => 'oeu', 'Oeu052368.1' => 'oeu', 'Oeu052370.1' => 'oeu', 'Os01g0210400' => 'osa', 'Os01g0304300' => 'osa', 'Os01g0749100' => 'osa', 'Os02g0745800' => 'osa', 'Os03g0769050' => 'osa', 'Os05g0531500' => 'osa', 'Os06g0724300' => 'osa', 'Os11g0198100' => 'osa', 'Peaxi162Scf00069g01425' => 'pax', 'Peaxi162Scf00280g00811' => 'pax', 'Peaxi162Scf00310g00615' => 'pax', 'Peaxi162Scf00362g00542' => 'pax', 'Peaxi162Scf00461g00310' => 'pax', 'Peaxi162Scf00530g00118' => 'pax', 'Peaxi162Scf00541g00057' => 'pax', 'Peaxi162Scf00661g00017' => 'pax', 'Peaxi162Scf00926g00027' => 'pax', 'Peaxi162Scf01064g00263' => 'pax', 'Peaxi162Scf01211g00135' => 'pax', 'PGR004G2336' => 'pgr', 'PGR042G0327' => 'pgr', 'PGR042G1957' => 'pgr', 'PGR042G2003' => 'pgr', 'PGR042G3929' => 'pgr', 'PGR083G1137' => 'pgr', 'PGR083G1364' => 'pgr', 'PGSC0003DMG400003381' => 'stu', 'PGSC0003DMG400003417' => 'stu', 'PGSC0003DMG400008981' => 'stu', 'PGSC0003DMG400012417' => 'stu', 'PGSC0003DMG400012823' => 'stu', 'PGSC0003DMG400016885' => 'stu', 'PGSC0003DMG400022812' => 'stu', 'PGSC0003DMG400029726' => 'stu', 'PGSC0003DMG401009243' => 'stu', 'PGSC0003DMG401031505' => 'stu', 'PGSC0003DMG402031505' => 'stu', 'Phvul.001G017600' => 'pvu', 'Phvul.002G193500' => 'pvu', 'Phvul.002G228900' => 'pvu', 'Phvul.002G236800' => 'pvu', 'Phvul.003G049500' => 'pvu', 'Phvul.005G072000' => 'pvu', 'Phvul.006G164800' => 'pvu', 'Phvul.006G185100' => 'pvu', 'Phvul.007G090000' => 'pvu', 'Potri.001G399800' => 'ptr', 'Potri.002G149900' => 'ptr', 'Potri.004G044100' => 'ptr', 'Potri.004G177600' => 'ptr', 'Potri.009G138000' => 'ptr', 'Potri.010G094000' => 'ptr', 'Potri.011G053000' => 'ptr', 'Potri.011G119300' => 'ptr', 'Potri.013G113700' => 'ptr', 'Potri.018G107800' => 'ptr', 'Potri.019G084100' => 'ptr', 'Pp3c14_23720' => 'ppa', 'Pp3c16_6340' => 'ppa', 'Pp3c23_13420' => 'ppa', 'Pp3c24_2740' => 'ppa', 'Pp3c25_860' => 'ppa', 'Pp3c8_21750' => 'ppa', 'Prupe.1G273000' => 'ppe', 'Prupe.1G273700' => 'ppe', 'Prupe.1G274100' => 'ppe', 'Prupe.2G023300' => 'ppe', 'Prupe.4G048000' => 'ppe', 'Prupe.4G080400' => 'ppe', 'Prupe.4G181200' => 'ppe', 'Prupe.8G056900' => 'ppe', 'Prupe.8G168700' => 'ppe', 'Psat1g189080' => 'psa', 'Psat1g204760' => 'psa', 'Psat4g175560' => 'psa', 'Psat4g177720' => 'psa', 'Psat5g244240' => 'psa', 'Psat6g010720' => 'psa', 'Psat6g187200' => 'psa', 'Psat7g072040' => 'psa', 'PSO017G3501' => 'pso', 'PSO063G2148' => 'pso', 'PSO063G5608' => 'pso', 'PSO210G6392' => 'pso', 'PSO541G2319' => 'pso', 'PSO541G2836' => 'pso', 'PSO541G4012' => 'pso', 'PSO541G6253' => 'pso', 'PSO675G0580' => 'pso', 'PSO675G0856' => 'pso', 'PSO675G5635' => 'pso', 'PSO675G9157' => 'pso', 'PSO832G1660' => 'pso', 'PSO832G1969' => 'pso', 'QL02p007186' => 'qlo', 'QL02p033904' => 'qlo', 'QL03p064391' => 'qlo', 'QL05p040593' => 'qlo', 'QL05p058242' => 'qlo', 'QL08p021825' => 'qlo', 'QL11p004981' => 'qlo', 'RcHm_v2.0_Chr1g0318301' => 'rch', 'RcHm_v2.0_Chr4g0418501' => 'rch', 'RcHm_v2.0_Chr4g0439971' => 'rch', 'RcHm_v2.0_Chr5g0008541' => 'rch', 'RcHm_v2.0_Chr5g0014101' => 'rch', 'RcHm_v2.0_Chr5g0014131' => 'rch', 'RcHm_v2.0_Chr5g0033621' => 'rch', 'RcHm_v2.0_Chr6g0272041' => 'rch', 'RcHm_v2.0_Chr6g0278831' => 'rch', 'Rhsim02G0130400' => 'rsi', 'Rhsim02G0171100' => 'rsi', 'Rhsim05G0053000' => 'rsi', 'Rhsim05G0053100' => 'rsi', 'Rhsim06G0096500' => 'rsi', 'Rhsim06G0096600' => 'rsi', 'Rhsim06G0199100' => 'rsi', 'Rhsim12G0062300' => 'rsi', 'Rhsim12G0062800' => 'rsi', 'Sabra02G0118600' => 'sbr', 'Sabra04G0027300' => 'sbr', 'Sabra04G0119500' => 'sbr', 'Sabra08G0112500' => 'sbr', 'Sabra11G0036800' => 'sbr', 'Sabra11G0103800' => 'sbr', 'Sabra13G0096300' => 'sbr', 'Sabra16G0262300' => 'sbr', 'Sabra18G0091700' => 'sbr', 'Sabra19G0095400' => 'sbr', 'SalBow6G3080' => 'sbo', 'SalBow7G1157' => 'sbo', 'SalBow7G2123' => 'sbo', 'SalBow7G2285' => 'sbo', 'SalBow7G3537' => 'sbo', 'SalBow8G2947' => 'sbo', 'SalBow8G4463' => 'sbo', 'SalBow8G5466' => 'sbo', 'Sc01g0001750' => 'sci', 'Sc02g0006640' => 'sci', 'Sc02g0006670' => 'sci', 'Sc04g0008220' => 'sci', 'Sc05g0006190' => 'sci', 'Sc08g0002760' => 'sci', 'Sc17g0006170' => 'sci', 'Sc22g0002050' => 'sci', 'Sc23g0001190' => 'sci', 'Sc24g0000980' => 'sci', 'Sed0006245' => 'sed', 'Sed0007543' => 'sed', 'Sed0009411' => 'sed', 'Sed0010765' => 'sed', 'Sed0012944' => 'sed', 'Sed0014682' => 'sed', 'Sed0016174' => 'sed', 'Sed0016796' => 'sed', 'Sed0020317' => 'sed', 'Sed0021467' => 'sed', 'SEGI_01316' => 'sgi', 'SEGI_03374' => 'sgi', 'SEGI_16265' => 'sgi', 'SEGI_18569' => 'sgi', 'SEGI_20351' => 'sgi', 'SEGI_26395' => 'sgi', 'SEGI_29469' => 'sgi', 'SEGI_34771' => 'sgi', 'SEGI_36769' => 'sgi', 'SEGI_37139' => 'sgi', 'SGA_v2.0_scaffold100G29687' => 'sas', 'SGA_v2.0_scaffold118G32472' => 'sas', 'SGA_v2.0_scaffold14G07051' => 'sas', 'SGA_v2.0_scaffold183G39845' => 'sas', 'SGA_v2.0_scaffold1G00174' => 'sas', 'SGA_v2.0_scaffold22G09714' => 'sas', 'SGA_v2.0_scaffold333G48992' => 'sas', 'SGA_v2.0_scaffold46G17491' => 'sas', 'SGA_v2.0_scaffold49G18294' => 'sas', 'SGA_v2.0_scaffold63G21658' => 'sas', 'SHI01741' => 'shi', 'SHI05771' => 'shi', 'SHI18077' => 'shi', 'SHI20525' => 'shi', 'SHI20527' => 'shi', 'SHI20528' => 'shi', 'SMO172G0185' => 'smo', 'SMO198G0020' => 'smo', 'SMO351G0006' => 'smo', 'SMO356G0118' => 'smo', 'SMO358G0296' => 'smo', 'SMO367G0079' => 'smo', 'SMO367G1277' => 'smo', 'Solyc01g014220.3' => 'sly', 'Solyc01g111770.2' => 'sly', 'Solyc02g078180.3' => 'sly', 'Solyc03g006430.3' => 'sly', 'Solyc03g006456.1' => 'sly', 'Solyc03g079860.2' => 'sly', 'Solyc04g079770.3' => 'sly', 'Solyc05g007430.4' => 'sly', 'Solyc07g063150.3' => 'sly', 'Solyc08g016620.3' => 'sly', 'Solyc09g057590.3' => 'sly', 'Solyc09g057600.1' => 'sly', 'Solyc10g009050.3' => 'sly', 'Solyc11g017420.2' => 'sly', 'Sopen01g053810' => 'spe', 'Sopen02g023040' => 'spe', 'Sopen03g002440' => 'spe', 'Sopen04g033350' => 'spe', 'Sopen05g003310' => 'spe', 'Sopen07g004050' => 'spe', 'Sopen07g031340' => 'spe', 'Sopen08g006990' => 'spe', 'Sopen10g004830' => 'spe', 'Sopen11g009370' => 'spe', 'Sp1g24450' => 'spa', 'Sp1g29670' => 'spa', 'Sp1g39600' => 'spa', 'Sp2g11080' => 'spa', 'Sp2g13970' => 'spa', 'Sp4g16130' => 'spa', 'Sp6g13080' => 'spa', 'Sp7g37270' => 'spa', 'TAR371G0065' => 'tar', 'TAR376G0340' => 'tar', 'TAR376G0435' => 'tar', 'TAR381G0002' => 'tar', 'TAR381G1236' => 'tar', 'TAR624G0055' => 'tar', 'TAR624G0324' => 'tar', 'TAR624G0696' => 'tar', 'TAR624G0906' => 'tar', 'TAR625G0107' => 'tar', 'TAR626G0015' => 'tar', 'TAR626G1356' => 'tar', 'TAR627G0888' => 'tar', 'TAR628G0399' => 'tar', 'TAR628G1327' => 'tar', 'TAR629G2831' => 'tar', 'TAR629G2874' => 'tar', 'TAR633G1432' => 'tar', 'TAR633G2771' => 'tar', 'THA.LOC104803394' => 'tha', 'THA.LOC104805153' => 'tha', 'THA.LOC104806784' => 'tha', 'THA.LOC104810473' => 'tha', 'THA.LOC104813100' => 'tha', 'THA.LOC104814215' => 'tha', 'THA.LOC104815554' => 'tha', 'THA.LOC104820544' => 'tha', 'THA.LOC104824754' => 'tha', 'THA.LOC104827717' => 'tha', 'Thecc.02G031400' => 'tca', 'Thecc.02G055900' => 'tca', 'Thecc.02G350800' => 'tca', 'Thecc.06G150900' => 'tca', 'Thecc.06G186600' => 'tca', 'Thecc.07G089600' => 'tca', 'Thecc.08G020400' => 'tca', 'Thecc.08G182100' => 'tca', 'Thhalv10000873m.g' => 'esa', 'Thhalv10004185m.g' => 'esa', 'Thhalv10006981m.g' => 'esa', 'Thhalv10007204m.g' => 'esa', 'Thhalv10011374m.g' => 'esa', 'Thhalv10013482m.g' => 'esa', 'Thhalv10017801m.g' => 'esa', 'Thhalv10024983m.g' => 'esa', 'TPR.G12072' => 'tpr', 'TPR.G15769' => 'tpr', 'TPR.G16504' => 'tpr', 'TPR.G16506' => 'tpr', 'TPR.G24345' => 'tpr', 'TPR.G26666' => 'tpr', 'TPR.G27320' => 'tpr', 'TPR.G31819' => 'tpr', 'TPR.G38879' => 'tpr', 'TPR.G39015' => 'tpr', 'TPR.G8819' => 'tpr', 'TWI09G0924' => 'twi', 'TWI12G0811' => 'twi', 'TWI12G1294' => 'twi', 'TWI31G0150' => 'twi', 'TWI36G1262' => 'twi', 'TWI38G1287' => 'twi', 'TWI38G1633' => 'twi', 'TWI38G1982' => 'twi', 'TWI39G0116' => 'twi', 'TWI60G1011' => 'twi', 'TWI63G0171' => 'twi', 'TWI73G0839' => 'twi', 'TWI79G1511' => 'twi', 'unitig_0.g915' => 'ugi', 'unitig_0.g916' => 'ugi', 'unitig_21.g20219' => 'ugi', 'unitig_21.g20416' => 'ugi', 'unitig_578.g16132' => 'ugi', 'unitig_578.g16718' => 'ugi', 'unitig_62.g23481' => 'ugi', 'unitig_744.g24535' => 'ugi', 'unitig_749.g13525' => 'ugi', 'vmacro01248' => 'vma', 'vmacro02290' => 'vma', 'vmacro10946' => 'vma', 'vmacro11865' => 'vma', 'vmacro12493' => 'vma', 'vmacro17322' => 'vma', 'vmacro21599' => 'vma', 'vmacro23041' => 'vma', 'VMungo0251G0004' => 'vmu', 'VMungo0251G2639' => 'vmu', 'VMungo0251G2967' => 'vmu', 'VMungo0540G0864' => 'vmu', 'VMungo0540G1569' => 'vmu', 'VMungo0647G0317' => 'vmu', 'VMungo0720G1373' => 'vmu', 'VMungo0720G1508' => 'vmu', 'VMungo1080G0485' => 'vmu', 'VMungo1215G3177' => 'vmu', 'Zm00001eb112600' => 'zma', 'Zm00001eb120220' => 'zma', 'Zm00001eb153240' => 'zma', 'Zm00001eb168880' => 'zma', 'Zm00001eb213920' => 'zma', 'Zm00001eb228280' => 'zma', 'Zm00001eb254580' => 'zma', 'Zm00001eb272180' => 'zma', 'Zm00001eb293190' => 'zma', 'Zm00001eb322930' => 'zma', 'Zm00001eb353360' => 'zma', 'Zm00001eb353390' => 'zma', 'Zm00001eb353430' => 'zma', 'Zm00001eb353440' => 'zma', 'Zm00001eb353780' => 'zma' ) $gf_id = 'HOM05D000499' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000499' ) $data_identifier = 'HOM05D000499' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 29, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 12, 'amhyb' => (int) 8, 'aly' => (int) 12, 'aox' => (int) 9, 'arhy' => (int) 26, 'ath' => (int) 8, 'atr' => (int) 7, 'acertr' => (int) 10, 'cqu' => (int) 15, 'bca' => (int) 29, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 11, 'cansat' => (int) 8, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 9, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 8, 'cpa' => (int) 10, 'csa' => (int) 7, 'camsi' => (int) 20, 'dca' => (int) 8, 'din' => (int) 12, 'dzi' => (int) 14, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 6, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 38, 'gra' => (int) 16, 'vvi' => (int) 8, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 5, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 11, 'lja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 11, 'mpo' => (int) 3, 'mbi' => (int) 14, 'mdo' => (int) 14, 'mtr' => (int) 8, 'cme' => (int) 9, 'egut' => (int) 9, 'ama' => (int) 11, 'nta' => (int) 17, 'nnu' => (int) 11, 'oeu' => (int) 18, 'osa' => (int) 8, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 6, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 9, 'rsi' => (int) 9, 'sbr' => (int) 10, 'sbo' => (int) 8, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 10, 'sas' => (int) 10, 'shi' => (int) 6, 'smo' => (int) 7, 'sly' => (int) 14, 'spe' => (int) 10, 'spa' => (int) 8, 'tar' => (int) 19, 'tha' => (int) 10, 'tca' => (int) 8, 'esa' => (int) 8, 'tpr' => (int) 11, 'twi' => (int) 13, 'ugi' => (int) 9, 'vma' => (int) 8, 'vmu' => (int) 10, 'zma' => (int) 15 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb353780' $species_info = array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ) $local_species = 'egr' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000499', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1066', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p29780' => 'bna', 'A02p33180' => 'bna', 'A03p16470' => 'bna', 'A03p66010' => 'bna', 'A04p25970' => 'bna', 'A06p01270' => 'bna', 'A06p46080' => 'bna', 'A07p11400' => 'bna', 'A08p01840' => 'bna', 'A08p08230' => 'bna', 'A08p25740' => 'bna', 'A09p32070' => 'bna', 'A09p37830' => 'bna', 'A09p42840' => 'bna', 'A09p42850' => 'bna', 'Aa31LG10G2060' => 'aar', 'Aa31LG2G7410' => 'aar', 'Aa31LG6G10200' => 'aar', 'Aa31LG6G16680' => 'aar', 'Aa31LG6G8470' => 'aar', 'Aa31LG9G12730' => 'aar', 'Aa31LG9G13680' => 'aar', 'Aa31LG9G14920' => 'aar', 'Aa31LG9G6650' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4977' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5467' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3254' => 'aag', 'Actinidia02578' => 'ach', 'Actinidia07693' => 'ach', 'Actinidia08413' => 'ach', 'Actinidia08414' => 'ach', 'Actinidia15289' => 'ach', 'Actinidia19871' => 'ach', 'Actinidia21475' => 'ach', 'Actinidia22576' => 'ach', 'Actinidia28327' => 'ach', 'Actinidia32491' => 'ach', 'Actinidia39463' => 'ach', 'Actinidia39571' => 'ach', 'Ah.01g013750' => 'amhyb', 'Ah.01g023210' => 'amhyb', 'Ah.04g164850' => 'amhyb', 'Ah.05g178060' => 'amhyb', 'Ah.07g204270' => 'amhyb', 'Ah.07g208480' => 'amhyb', 'Ah.09g237410' => 'amhyb', 'Ah.14g089460' => 'amhyb', 'AL1G41790' => 'aly', 'AL1G49050' => 'aly', 'AL1G53810' => 'aly', 'AL1G61400' => 'aly', 'AL4G18580' => 'aly', 'AL5G12510' => 'aly', 'AL5G12540' => 'aly', 'AL6G43230' => 'aly', 'AL7G10370' => 'aly', 'AL7G19250' => 'aly', 'AL8G12240' => 'aly', 'AL8G18540' => 'aly', 'Aqoxy1G02409' => 'aox', 'Aqoxy2G03993' => 'aox', 'Aqoxy3G03357' => 'aox', 'Aqoxy4G00785' => 'aox', 'Aqoxy5G02598' => 'aox', 'Aqoxy6G00132' => 'aox', 'Aqoxy7G01776' => 'aox', 'Aqoxy7G02316' => 'aox', 'Aqoxy7G03973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.12AFKW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B8730' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27IQR1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3F75VG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3RE0GA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41TCQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.527VTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FIR39' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5W8UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DA38EV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ63HS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H1I32C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HC27T5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4M8AP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7N3CZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9UVDZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LS1NQA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT1D4B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SKC4TM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCFV76' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF9Q1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQWD9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1ZM88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WE07RT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YCK7VH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJE6Q6' => 'arhy', 'AT1G28240' => 'ath', 'AT1G34550' => 'ath', 'AT1G53040' => 'ath', 'AT2G02910' => 'ath', 'AT4G09630' => 'ath', 'AT4G38500' => 'ath', 'AT5G42660' => 'ath', 'AT5G46220' => 'ath', 'ATR0152G026' => 'atr', 'ATR0564G343' => 'atr', 'ATR0706G151' => 'atr', 'ATR0733G207' => 'atr', 'ATR0751G234' => 'atr', 'ATR0807G048' => 'atr', 'ATR1091G084' => 'atr', 'Atru.chr10.1229' => 'acertr', 'Atru.chr10.1230' => 'acertr', 'Atru.chr10.1874' => 'acertr', 'Atru.chr11.1808' => 'acertr', 'Atru.chr13.1795' => 'acertr', 'Atru.chr13.570' => 'acertr', 'Atru.chr2.2608' => 'acertr', 'Atru.chr2.2609' => 'acertr', 'Atru.chr5.3428' => 'acertr', 'Atru.chr8.1171' => 'acertr', 'AUR62004651' => 'cqu', 'AUR62008675' => 'cqu', 'AUR62010014' => 'cqu', 'AUR62013004' => 'cqu', 'AUR62014825' => 'cqu', 'AUR62015015' => 'cqu', 'AUR62015151' => 'cqu', 'AUR62017020' => 'cqu', 'AUR62019422' => 'cqu', 'AUR62023570' => 'cqu', 'AUR62025571' => 'cqu', 'AUR62029098' => 'cqu', 'AUR62033863' => 'cqu', 'AUR62034296' => 'cqu', 'AUR62040075' => 'cqu', 'BcaB02g07334' => 'bca', 'BcaB02g10575' => 'bca', 'BcaB03g12119' => 'bca', 'BcaB03g12120' => 'bca', 'BcaB03g13945' => 'bca', 'BcaB04g17123' => 'bca', 'BcaB04g17867' => 'bca', 'BcaB04g19839' => 'bca', 'BcaB07g30317' => 'bca', 'BcaB07g32432' => 'bca', 'BcaB07g33362' => 'bca', 'BcaB08g36611' => 'bca', 'BcaC01g00028' => 'bca', 'BcaC01g01356' => 'bca', 'BcaC01g02034' => 'bca', 'BcaC01g06051' => 'bca', 'BcaC03g16839' => 'bca', 'BcaC03g17176' => 'bca', 'BcaC05g26829' => 'bca', 'BcaC06g31490' => 'bca', 'BcaC06g35344' => 'bca', 'BcaC06g36570' => 'bca', 'BcaC07g37537' => 'bca', 'BcaC08g43491' => 'bca', 'BcaC08g43773' => 'bca', 'BcaNung00234' => 'bca', 'BcaNung01982' => 'bca', 'BcaNung03707' => 'bca', 'BcaNung06454' => 'bca', 'BolC2t10762H' => 'bol', 'BolC2t11191H' => 'bol', 'BolC3t14322H' => 'bol', 'BolC3t19747H' => 'bol', 'BolC3t21425H' => 'bol', 'BolC4t27800H' => 'bol', 'BolC5t31423H' => 'bol', 'BolC6t35951H' => 'bol', 'BolC6t36282H' => 'bol', 'BolC7t40678H' => 'bol', 'BolC7t40679H' => 'bol', 'BolC7t42222H' => 'bol', 'BolC7t43492H' => 'bol', 'BolC7t46785H' => 'bol', 'BolC8t47853H' => 'bol', 'BolC9t56805H' => 'bol', 'BraA02t08000Z' => 'bra', 'BraA02t08341Z' => 'bra', 'BraA03t10936Z' => 'bra', 'BraA03t15657Z' => 'bra', 'BraA04t18100Z' => 'bra', 'BraA05t20523Z' => 'bra', 'BraA06t23353Z' => 'bra', 'BraA06t27473Z' => 'bra', 'BraA06t27769Z' => 'bra', 'BraA07t28928Z' => 'bra', 'BraA08t32236Z' => 'bra', 'BraA08t32841Z' => 'bra', 'BraA08t34524Z' => 'bra', 'BraA09t38742Z' => 'bra', 'BraA09t39295Z' => 'bra', 'C02p47180' => 'bna', 'C02p50990' => 'bna', 'C03p19360' => 'bna', 'C03p74950' => 'bna', 'C03p91000' => 'bna', 'C04p63260' => 'bna', 'C05p27050' => 'bna', 'C06p08750' => 'bna', 'C06p11490' => 'bna', 'C07p02820' => 'bna', 'C07p17180' => 'bna', 'C07p29440' => 'bna', 'C07p63730' => 'bna', 'C09p39260' => 'bna', 'CAN.G1164.34' => 'can', 'CAN.G1164.39' => 'can', 'CAN.G1530.3' => 'can', 'CAN.G162.61' => 'can', 'CAN.G176.6' => 'can', 'CAN.G289.49' => 'can', 'CAN.G370.21' => 'can', 'CAN.G370.22' => 'can', 'CAN.G371.117' => 'can', 'CAN.G58.37' => 'can', 'CAN.G588.98' => 'can', 'CANSAT21G2266' => 'cansat', 'CANSAT25G2799' => 'cansat', 'CANSAT35G0862' => 'cansat', 'CANSAT35G1704' => 'cansat', 'CANSAT35G1760' => 'cansat', 'CANSAT56G3971' => 'cansat', 'CANSAT56G4116' => 'cansat', 'CANSAT80G1259' => 'cansat', 'CARHR027730' => 'chi', 'CARHR033880' => 'chi', 'CARHR043270' => 'chi', 'CARHR145330' => 'chi', 'CARHR145340' => 'chi', 'CARHR175570' => 'chi', 'CARHR181570' => 'chi', 'CARHR258470' => 'chi', 'CARHR260490' => 'chi', 'CARHR294220' => 'chi', 'Carub.0001s2668' => 'cru', 'Carub.0001s3257' => 'cru', 'Carub.0001s4220' => 'cru', 'Carub.0005s0179' => 'cru', 'Carub.0006s2807' => 'cru', 'Carub.0007s0039' => 'cru', 'Carub.0008s0169' => 'cru', 'Carub.0008s0636' => 'cru', 'Ca_00338_v3' => 'car', 'Ca_00542_v3' => 'car', 'Ca_01844_v3' => 'car', 'Ca_10611_v3' => 'car', 'Ca_13326_v3' => 'car', 'Ca_17944_v3' => 'car', 'Ca_18546_v3' => 'car', 'Ca_24219_v3' => 'car', 'Ca_29972_v3' => 'car', 'CBR_g3681' => 'cbr', 'CBR_g40021' => 'cbr', 'Cc01_g08140' => 'ccan', 'Cc02_g13410' => 'ccan', 'Cc02_g37480' => 'ccan', 'Cc05_g12030' => 'ccan', 'Cc09_g03370' => 'ccan', 'Cc09_g10300' => 'ccan', 'Cc10_g03530' => 'ccan', 'Cc10_g11380' => 'ccan', 'CDE01G0176' => 'cde', 'CDE02G0675' => 'cde', 'CDE02G0942' => 'cde', 'CDE02G1153' => 'cde', 'CDE02G4177' => 'cde', 'CDE04G2117' => 'cde', 'CDE04G2736' => 'cde', 'CDE08G1161' => 'cde', 'CDE09G1238' => 'cde', 'Cfa000467' => 'cfa', 'Cfa000947' => 'cfa', 'Cfa004969' => 'cfa', 'Cfa005284' => 'cfa', 'Cfa008993' => 'cfa', 'Cfa018187' => 'cfa', 'Cfa018454' => 'cfa', 'Cfa020585' => 'cfa', 'Ciclev10000424m.g' => 'ccl', 'Ciclev10003605m.g' => 'ccl', 'Ciclev10007828m.g' => 'ccl', 'Ciclev10014620m.g' => 'ccl', 'Ciclev10015169m.g' => 'ccl', 'Ciclev10018291m.g' => 'ccl', 'Ciclev10028256m.g' => 'ccl', 'Ciclev10033822m.g' => 'ccl', 'CiPaw.05G060300' => 'cil', 'CiPaw.05G085000' => 'cil', 'CiPaw.06G083700' => 'cil', 'CiPaw.06G120300' => 'cil', 'CiPaw.09G060500' => 'cil', 'CiPaw.09G123800' => 'cil', 'CiPaw.11G169700' => 'cil', 'CiPaw.12G118300' => 'cil', 'CiPaw.15G071000' => 'cil', 'CiPaw.15G081900' => 'cil', 'ClCG01G024610' => 'cla', 'ClCG03G006070' => 'cla', 'ClCG05G019250' => 'cla', 'ClCG09G009500' => 'cla', 'ClCG11G008200' => 'cla', 'ClCG11G018080' => 'cla', 'COL.COLO4_17373' => 'col', 'COL.COLO4_22994' => 'col', 'COL.COLO4_26389' => 'col', 'COL.COLO4_27170' => 'col', 'COL.COLO4_31074' => 'col', 'COL.COLO4_31465' => 'col', 'COL.COLO4_36438' => 'col', 'COL.COLO4_36439' => 'col', 'Cpa.g.c38781' => 'cpa', 'Cpa.g.sc128.12' => 'cpa', 'Cpa.g.sc166.7' => 'cpa', 'Cpa.g.sc166.8' => 'cpa', 'Cpa.g.sc20.111' => 'cpa', 'Cpa.g.sc27.31' => 'cpa', 'Cpa.g.sc64.36' => 'cpa', 'Cpa.g.sc64.37' => 'cpa', 'Cpa.g.sc66.49' => 'cpa', 'Cpa.g.sc80.64' => 'cpa', 'CsaV3_1G012320' => 'csa', 'CsaV3_2G008480' => 'csa', 'CsaV3_2G033450' => 'csa', 'CsaV3_3G044830' => 'csa', 'CsaV3_4G033710' => 'csa', 'CsaV3_6G051730' => 'csa', 'CsaV3_7G025350' => 'csa', 'CSS0001067' => 'camsi', 'CSS0005996' => 'camsi', 'CSS0006590' => 'camsi', 'CSS0009673' => 'camsi', 'CSS0010201' => 'camsi', 'CSS0010549' => 'camsi', 'CSS0011364' => 'camsi', 'CSS0014473' => 'camsi', 'CSS0014961' => 'camsi', 'CSS0020191' => 'camsi', 'CSS0021165' => 'camsi', 'CSS0022306' => 'camsi', 'CSS0030591' => 'camsi', 'CSS0030696' => 'camsi', 'CSS0032653' => 'camsi', 'CSS0037487' => 'camsi', 'CSS0041102' => 'camsi', 'CSS0041261' => 'camsi', 'CSS0046246' => 'camsi', 'CSS0049256' => 'camsi', 'DCAR_004075' => 'dca', 'DCAR_011538' => 'dca', 'DCAR_019553' => 'dca', 'DCAR_020952' => 'dca', 'DCAR_021739' => 'dca', 'DCAR_027407' => 'dca', 'DCAR_027913' => 'dca', 'DCAR_028066' => 'dca', 'Dinv05899' => 'din', 'Dinv07563' => 'din', 'Dinv08010' => 'din', 'Dinv14125' => 'din', 'Dinv20172' => 'din', 'Dinv30743' => 'din', 'Dinv31229' => 'din', 'Dinv34162' => 'din', 'Dinv36028' => 'din', 'Dinv39368' => 'din', 'Dinv40565' => 'din', 'Dinv41706' => 'din', 'Duzib052G0089' => 'dzi', 'Duzib116G0641' => 'dzi', 'Duzib132G0069' => 'dzi', 'Duzib132G1219' => 'dzi', 'Duzib147G0278' => 'dzi', 'Duzib160G0480' => 'dzi', 'Duzib170G0661' => 'dzi', 'Duzib177G0591' => 'dzi', 'Duzib187G1353' => 'dzi', 'Duzib192G0858' => 'dzi', 'Duzib192G0883' => 'dzi', 'Duzib213G0506' => 'dzi', 'Duzib235G0289' => 'dzi', 'Duzib251G0422' => 'dzi', 'ECA232G3898' => 'eca', 'ECA233G5950' => 'eca', 'ECA234G1699' => 'eca', 'ECA234G2421' => 'eca', 'ECA236G0426' => 'eca', 'ECA236G4331' => 'eca', 'ECA248G2573' => 'eca', 'EL10Ac1g00077' => 'bvu', 'EL10Ac1g01746' => 'bvu', 'EL10Ac2g03464' => 'bvu', 'EL10Ac4g08176' => 'bvu', 'EL10Ac7g17521' => 'bvu', 'EL10Ac8g20386' => 'bvu', 'EL10Ac9g21343' => 'bvu', 'EL10Ac9g22688' => 'bvu', 'Eucgr.B03434' => 'egr', 'Eucgr.D00618' => 'egr', 'Eucgr.E02395' => 'egr', 'Eucgr.F01129' => 'egr', 'Eucgr.F02622' => 'egr', 'Eucgr.F04207' => 'egr', 'FAN01G0570' => 'fan', 'FAN03G3351' => 'fan', 'FAN06G3702' => 'fan', 'FAN07G2149' => 'fan', 'FAN10G3758' => 'fan', 'FAN11G1170' => 'fan', 'FAN11G2050' => 'fan', 'FAN11G2724' => 'fan', 'FAN12G1700' => 'fan', 'FAN12G2028' => 'fan', 'FAN15G1160' => 'fan', 'FAN15G3063' => 'fan', 'FAN16G2540' => 'fan', 'FAN16G3077' => 'fan', 'FAN16G3624' => 'fan', 'FAN17G0221' => 'fan', 'FAN20G2492' => 'fan', 'FAN20G2905' => 'fan', 'FAN21G0548' => 'fan', 'FAN21G1300' => 'fan', 'FAN22G0077' => 'fan', 'FAN22G1315' => 'fan', 'FAN24G1280' => 'fan', 'FAN24G1445' => 'fan', 'FAN24G3527' => 'fan', 'FAN25G0464' => 'fan', 'FAN25G2885' => 'fan', 'FAN25G3270' => 'fan', 'FAN27G1101' => 'fan', 'FAN27G2846' => 'fan', 'FAN27G3524' => 'fan', 'FvH4_2g11770' => 'fve', 'FvH4_2g15630' => 'fve', 'FvH4_3g05570' => 'fve', 'FvH4_3g09110' => 'fve', 'FvH4_3g19940' => 'fve', 'FvH4_4g04821' => 'fve', 'FvH4_4g31480' => 'fve', 'FvH4_7g01740' => 'fve', 'Glyma.05G130400' => 'gma', 'Glyma.05G156400' => 'gma', 'Glyma.07G197000' => 'gma', 'Glyma.08G085151' => 'gma', 'Glyma.08G114500' => 'gma', 'Glyma.08G300400' => 'gma', 'Glyma.10G215800' => 'gma', 'Glyma.12G224400' => 'gma', 'Glyma.13G179300' => 'gma', 'Glyma.13G218151' => 'gma', 'Glyma.13G238800' => 'gma', 'Glyma.13G276900' => 'gma', 'Glyma.14G078200' => 'gma', 'Glyma.15G074500' => 'gma', 'Glyma.15G094100' => 'gma', 'Glyma.17G247200' => 'gma', 'Glyma.18G120100' => 'gma', 'Glyma.20G176000' => 'gma', 'Gohir.A01G063600' => 'ghi', 'Gohir.A01G170301' => 'ghi', 'Gohir.A02G060500' => 'ghi', 'Gohir.A05G133850' => 'ghi', 'Gohir.A05G161400' => 'ghi', 'Gohir.A06G012900' => 'ghi', 'Gohir.A06G035901' => 'ghi', 'Gohir.A06G127100' => 'ghi', 'Gohir.A06G210500' => 'ghi', 'Gohir.A08G008650' => 'ghi', 'Gohir.A09G072700' => 'ghi', 'Gohir.A09G088301' => 'ghi', 'Gohir.A10G040600' => 'ghi', 'Gohir.A12G036300' => 'ghi', 'Gohir.A12G143350' => 'ghi', 'Gohir.A12G165500' => 'ghi', 'Gohir.A13G145700' => 'ghi', 'Gohir.D01G050000' => 'ghi', 'Gohir.D01G051366' => 'ghi', 'Gohir.D01G161350' => 'ghi', 'Gohir.D02G065900' => 'ghi', 'Gohir.D05G164200' => 'ghi', 'Gohir.D05G355500' => 'ghi', 'Gohir.D06G010400' => 'ghi', 'Gohir.D06G111250' => 'ghi', 'Gohir.D06G132000' => 'ghi', 'Gohir.D06G210500' => 'ghi', 'Gohir.D07G165675' => 'ghi', 'Gohir.D08G062240' => 'ghi', 'Gohir.D08G086101' => 'ghi', 'Gohir.D08G138060' => 'ghi', 'Gohir.D09G072300' => 'ghi', 'Gohir.D10G041400' => 'ghi', 'Gohir.D11G191020' => 'ghi', 'Gohir.D11G212066' => 'ghi', 'Gohir.D12G036300' => 'ghi', 'Gohir.D12G168600' => 'ghi', 'Gohir.D13G150600' => 'ghi', 'Gorai.001G057300' => 'gra', 'Gorai.002G069900' => 'gra', 'Gorai.002G200000' => 'gra', 'Gorai.003G067600' => 'gra', 'Gorai.005G074800' => 'gra', 'Gorai.006G087300' => 'gra', 'Gorai.008G037500' => 'gra', 'Gorai.008G181400' => 'gra', 'Gorai.009G169400' => 'gra', 'Gorai.009G387900' => 'gra', 'Gorai.010G013300' => 'gra', 'Gorai.010G153800' => 'gra', 'Gorai.010G255800' => 'gra', 'Gorai.011G043700' => 'gra', 'Gorai.011G198900' => 'gra', 'Gorai.013G168400' => 'gra', 'GSVIVG01005212001' => 'vvi', 'GSVIVG01006163001' => 'vvi', 'GSVIVG01009625001' => 'vvi', 'GSVIVG01014338001' => 'vvi', 'GSVIVG01020005001' => 'vvi', 'GSVIVG01021450001' => 'vvi', 'GSVIVG01023975001' => 'vvi', 'GSVIVG01034490001' => 'vvi', 'HanXRQChr04g0112071' => 'han', 'HanXRQChr05g0131151' => 'han', 'HanXRQChr09g0262371' => 'han', 'HanXRQChr09g0268401' => 'han', 'HanXRQChr10g0279241' => 'han', 'HanXRQChr10g0297961' => 'han', 'HanXRQChr11g0326231' => 'han', 'HanXRQChr11g0328471' => 'han', 'HanXRQChr16g0507941' => 'han', 'HanXRQChr17g0560211' => 'han', 'Haze_02108' => 'cav', 'Haze_02428' => 'cav', 'Haze_05593' => 'cav', 'Haze_06448' => 'cav', 'Haze_09427' => 'cav', 'Haze_12022' => 'cav', 'Haze_17612' => 'cav', 'Haze_17928' => 'cav', 'Hma1.2p1_0032F.1_g019250' => 'hma', 'Hma1.2p1_0163F.1_g072690' => 'hma', 'Hma1.2p1_0265F.1_g106710' => 'hma', 'Hma1.2p1_0286F.1_g113970' => 'hma', 'Hma1.2p1_0363F.1_g136640' => 'hma', 'Hma1.2p1_0584F.1_g183470' => 'hma', 'Hma1.2p1_0885F.1_g232570' => 'hma', 'HPP92_006022' => 'vpl', 'HPP92_007320' => 'vpl', 'HPP92_011521' => 'vpl', 'HPP92_019387' => 'vpl', 'HPP92_024038' => 'vpl', 'Hund05891' => 'sun', 'Hund06450' => 'sun', 'Hund12053' => 'sun', 'Hund16800' => 'sun', 'Hund21222' => 'sun', 'Hund22896' => 'sun', 'Hund23746' => 'sun', 'Hund27083' => 'sun', 'Lalb_Chr02g0141831' => 'lal', 'Lalb_Chr02g0141841' => 'lal', 'Lalb_Chr05g0220411' => 'lal', 'Lalb_Chr06g0162081' => 'lal', 'Lalb_Chr09g0327651' => 'lal', 'Lalb_Chr13g0295051' => 'lal', 'Lalb_Chr15g0086801' => 'lal', 'Lalb_Chr16g0383781' => 'lal', 'Lalb_Chr16g0383791' => 'lal', 'Lalb_Chr18g0055441' => 'lal', 'Lalb_Chr18g0059611' => 'lal', 'Lalb_Chr20g0109661' => 'lal', 'Lalb_Chr20g0109831' => 'lal', 'Lalb_Chr20g0121871' => 'lal', 'Lalb_Chr22g0355361' => 'lal', 'Lalb_Chr25g0286371' => 'lal', 'Lj1A1187G43' => 'lonja', 'Lj1A1205T50' => 'lonja', 'Lj1A800G33' => 'lonja', 'Lj1C1187T7' => 'lonja', 'Lj1C843T11' => 'lonja', 'Lj1g0010940' => 'lja', 'Lj2A288T69' => 'lonja', 'Lj3g0024276' => 'lja', 'Lj4A47T76' => 'lonja', 'Lj4g0005805' => 'lja', 'Lj4g0006097' => 'lja', 'Lj4g0008528' => 'lja', 'Lj4g0024907' => 'lja', 'Lj5g0012472' => 'lja', 'Lj5g0018648' => 'lja', 'Lj6C789G1' => 'lonja', 'Lj6g0004000' => 'lja', 'Lj7A292G67' => 'lonja', 'Lj7A292T64' => 'lonja', 'Lj9A400T58' => 'lonja', 'Lsat_1_v5_gn_1_126181' => 'lsa', 'Lsat_1_v5_gn_4_123041' => 'lsa', 'Lsat_1_v5_gn_4_133620' => 'lsa', 'Lsat_1_v5_gn_4_53221' => 'lsa', 'Lsat_1_v5_gn_4_71961' => 'lsa', 'Lsat_1_v5_gn_7_105241' => 'lsa', 'Lsat_1_v5_gn_7_21361' => 'lsa', 'Lsat_1_v5_gn_7_28860' => 'lsa', 'Lsat_1_v5_gn_7_31260' => 'lsa', 'Lsat_1_v5_gn_8_52801' => 'lsa', 'Manes.02G191400' => 'mes', 'Manes.03G110100' => 'mes', 'Manes.04G071100' => 'mes', 'Manes.05G100500' => 'mes', 'Manes.05G164700' => 'mes', 'Manes.15G087000' => 'mes', 'Manes.15G121500' => 'mes', 'Manes.16G028300' => 'mes', 'Manes.17G046100' => 'mes', 'Manes.17G069800' => 'mes', 'Manes.18G100500' => 'mes', 'Mapoly0002s0109' => 'mpo', 'Mapoly0024s0007' => 'mpo', 'Mapoly0089s0032' => 'mpo', 'MBI04_g42241_MAGBIO' => 'mbi', 'MBI05_g11988_MAGBIO' => 'mbi', 'MBI05_g35452_MAGBIO' => 'mbi', 'MBI07_g30179_MAGBIO' => 'mbi', 'MBI07_g35859_MAGBIO' => 'mbi', 'MBI07_g35860_MAGBIO' => 'mbi', 'MBI07_g37166_MAGBIO' => 'mbi', 'MBI08_g18172_MAGBIO' => 'mbi', 'MBI09_g08441_MAGBIO' => 'mbi', 'MBI13_g01676_MAGBIO' => 'mbi', 'MBI14_g42955_MAGBIO' => 'mbi', 'MBI16_g13161_MAGBIO' => 'mbi', 'MBI17_g27204_MAGBIO' => 'mbi', 'MBI19_g21595_MAGBIO' => 'mbi', 'MD00G1148400' => 'mdo', 'MD02G1301200' => 'mdo', 'MD03G1227800' => 'mdo', 'MD05G1041100' => 'mdo', 'MD05G1124800' => 'mdo', 'MD05G1284000' => 'mdo', 'MD05G1338800' => 'mdo', 'MD05G1338900' => 'mdo', 'MD07G1022800' => 'mdo', 'MD10G1047500' => 'mdo', 'MD10G1127500' => 'mdo', 'MD10G1262300' => 'mdo', 'MD10G1293800' => 'mdo', 'MD16G1074300' => 'mdo', 'Medtr1g021670' => 'mtr', 'Medtr1g096320' => 'mtr', 'Medtr2g013690' => 'mtr', 'Medtr2g019450' => 'mtr', 'Medtr2g085170' => 'mtr', 'Medtr4g088785' => 'mtr', 'Medtr8g055930' => 'mtr', 'Medtr8g085850' => 'mtr', 'MELO3C002605.2' => 'cme', 'MELO3C003891.2' => 'cme', 'MELO3C004012.2' => 'cme', 'MELO3C007134.2' => 'cme', 'MELO3C008118.2' => 'cme', 'MELO3C016700.2' => 'cme', 'MELO3C024127.2' => 'cme', 'MELO3C033361.2' => 'cme', 'MELO3C033362.2' => 'cme', 'Migut.C00430' => 'egut', 'Migut.C01246' => 'egut', 'Migut.E00101' => 'egut', 'Migut.H01486' => 'egut', 'Migut.H01939' => 'egut', 'Migut.K00360' => 'egut', 'Migut.M00910' => 'egut', 'Migut.M01139' => 'egut', 'Migut.N02677' => 'egut', 'MSTRG.13252' => 'ama', 'MSTRG.14701' => 'ama', 'MSTRG.1521' => 'ama', 'MSTRG.15884' => 'ama', 'MSTRG.16242' => 'ama', 'MSTRG.22285' => 'ama', 'MSTRG.22444' => 'ama', 'MSTRG.2349' => 'ama', 'MSTRG.26308' => 'ama', 'MSTRG.28296' => 'ama', 'MSTRG.9895' => 'ama', 'Nitab4.5_0000110g0060' => 'nta', 'Nitab4.5_0000420g0130' => 'nta', 'Nitab4.5_0000422g0030' => 'nta', 'Nitab4.5_0000560g0180' => 'nta', 'Nitab4.5_0000703g0100' => 'nta', 'Nitab4.5_0000786g0200' => 'nta', 'Nitab4.5_0001336g0020' => 'nta', 'Nitab4.5_0001796g0030' => 'nta', 'Nitab4.5_0003348g0060' => 'nta', 'Nitab4.5_0003698g0040' => 'nta', 'Nitab4.5_0003942g0090' => 'nta', 'Nitab4.5_0004775g0070' => 'nta', 'Nitab4.5_0004864g0030' => 'nta', 'Nitab4.5_0005615g0020' => 'nta', 'Nitab4.5_0009288g0030' => 'nta', 'Nitab4.5_0009341g0010' => 'nta', 'Nitab4.5_0009535g0010' => 'nta', 'Nn1g03995' => 'nnu', 'Nn1g04100' => 'nnu', 'Nn1g06530' => 'nnu', 'Nn3g16404' => 'nnu', 'Nn3g17212' => 'nnu', 'Nn3g20776' => 'nnu', 'Nn3g21923' => 'nnu', 'Nn5g27737' => 'nnu', 'Nn5g29461' => 'nnu', 'Nn7g38355' => 'nnu', 'Nn8g39873' => 'nnu', 'Oeu000548.2' => 'oeu', 'Oeu004672.1' => 'oeu', 'Oeu015605.2' => 'oeu', 'Oeu016092.1' => 'oeu', 'Oeu017879.3' => 'oeu', 'Oeu024910.1' => 'oeu', 'Oeu028965.1' => 'oeu', 'Oeu031269.1' => 'oeu', 'Oeu031270.1' => 'oeu', 'Oeu032535.1' => 'oeu', 'Oeu034151.1' => 'oeu', 'Oeu034152.1' => 'oeu', 'Oeu034588.2' => 'oeu', 'Oeu050846.1' => 'oeu', 'Oeu050849.2' => 'oeu', 'Oeu051063.2' => 'oeu', 'Oeu052368.1' => 'oeu', 'Oeu052370.1' => 'oeu', 'Os01g0210400' => 'osa', 'Os01g0304300' => 'osa', 'Os01g0749100' => 'osa', 'Os02g0745800' => 'osa', 'Os03g0769050' => 'osa', 'Os05g0531500' => 'osa', 'Os06g0724300' => 'osa', 'Os11g0198100' => 'osa', 'Peaxi162Scf00069g01425' => 'pax', 'Peaxi162Scf00280g00811' => 'pax', 'Peaxi162Scf00310g00615' => 'pax', 'Peaxi162Scf00362g00542' => 'pax', 'Peaxi162Scf00461g00310' => 'pax', 'Peaxi162Scf00530g00118' => 'pax', 'Peaxi162Scf00541g00057' => 'pax', 'Peaxi162Scf00661g00017' => 'pax', 'Peaxi162Scf00926g00027' => 'pax', 'Peaxi162Scf01064g00263' => 'pax', 'Peaxi162Scf01211g00135' => 'pax', 'PGR004G2336' => 'pgr', 'PGR042G0327' => 'pgr', 'PGR042G1957' => 'pgr', 'PGR042G2003' => 'pgr', 'PGR042G3929' => 'pgr', 'PGR083G1137' => 'pgr', 'PGR083G1364' => 'pgr', 'PGSC0003DMG400003381' => 'stu', 'PGSC0003DMG400003417' => 'stu', 'PGSC0003DMG400008981' => 'stu', 'PGSC0003DMG400012417' => 'stu', 'PGSC0003DMG400012823' => 'stu', 'PGSC0003DMG400016885' => 'stu', 'PGSC0003DMG400022812' => 'stu', 'PGSC0003DMG400029726' => 'stu', 'PGSC0003DMG401009243' => 'stu', 'PGSC0003DMG401031505' => 'stu', 'PGSC0003DMG402031505' => 'stu', 'Phvul.001G017600' => 'pvu', 'Phvul.002G193500' => 'pvu', 'Phvul.002G228900' => 'pvu', 'Phvul.002G236800' => 'pvu', 'Phvul.003G049500' => 'pvu', 'Phvul.005G072000' => 'pvu', 'Phvul.006G164800' => 'pvu', 'Phvul.006G185100' => 'pvu', 'Phvul.007G090000' => 'pvu', 'Potri.001G399800' => 'ptr', 'Potri.002G149900' => 'ptr', 'Potri.004G044100' => 'ptr', 'Potri.004G177600' => 'ptr', 'Potri.009G138000' => 'ptr', 'Potri.010G094000' => 'ptr', 'Potri.011G053000' => 'ptr', 'Potri.011G119300' => 'ptr', 'Potri.013G113700' => 'ptr', 'Potri.018G107800' => 'ptr', 'Potri.019G084100' => 'ptr', 'Pp3c14_23720' => 'ppa', 'Pp3c16_6340' => 'ppa', 'Pp3c23_13420' => 'ppa', 'Pp3c24_2740' => 'ppa', 'Pp3c25_860' => 'ppa', 'Pp3c8_21750' => 'ppa', 'Prupe.1G273000' => 'ppe', 'Prupe.1G273700' => 'ppe', 'Prupe.1G274100' => 'ppe', 'Prupe.2G023300' => 'ppe', 'Prupe.4G048000' => 'ppe', 'Prupe.4G080400' => 'ppe', 'Prupe.4G181200' => 'ppe', 'Prupe.8G056900' => 'ppe', 'Prupe.8G168700' => 'ppe', 'Psat1g189080' => 'psa', 'Psat1g204760' => 'psa', 'Psat4g175560' => 'psa', 'Psat4g177720' => 'psa', 'Psat5g244240' => 'psa', 'Psat6g010720' => 'psa', 'Psat6g187200' => 'psa', 'Psat7g072040' => 'psa', 'PSO017G3501' => 'pso', 'PSO063G2148' => 'pso', 'PSO063G5608' => 'pso', 'PSO210G6392' => 'pso', 'PSO541G2319' => 'pso', 'PSO541G2836' => 'pso', 'PSO541G4012' => 'pso', 'PSO541G6253' => 'pso', 'PSO675G0580' => 'pso', 'PSO675G0856' => 'pso', 'PSO675G5635' => 'pso', 'PSO675G9157' => 'pso', 'PSO832G1660' => 'pso', 'PSO832G1969' => 'pso', 'QL02p007186' => 'qlo', 'QL02p033904' => 'qlo', 'QL03p064391' => 'qlo', 'QL05p040593' => 'qlo', 'QL05p058242' => 'qlo', 'QL08p021825' => 'qlo', 'QL11p004981' => 'qlo', 'RcHm_v2.0_Chr1g0318301' => 'rch', 'RcHm_v2.0_Chr4g0418501' => 'rch', 'RcHm_v2.0_Chr4g0439971' => 'rch', 'RcHm_v2.0_Chr5g0008541' => 'rch', 'RcHm_v2.0_Chr5g0014101' => 'rch', 'RcHm_v2.0_Chr5g0014131' => 'rch', 'RcHm_v2.0_Chr5g0033621' => 'rch', 'RcHm_v2.0_Chr6g0272041' => 'rch', 'RcHm_v2.0_Chr6g0278831' => 'rch', 'Rhsim02G0130400' => 'rsi', 'Rhsim02G0171100' => 'rsi', 'Rhsim05G0053000' => 'rsi', 'Rhsim05G0053100' => 'rsi', 'Rhsim06G0096500' => 'rsi', 'Rhsim06G0096600' => 'rsi', 'Rhsim06G0199100' => 'rsi', 'Rhsim12G0062300' => 'rsi', 'Rhsim12G0062800' => 'rsi', 'Sabra02G0118600' => 'sbr', 'Sabra04G0027300' => 'sbr', 'Sabra04G0119500' => 'sbr', 'Sabra08G0112500' => 'sbr', 'Sabra11G0036800' => 'sbr', 'Sabra11G0103800' => 'sbr', 'Sabra13G0096300' => 'sbr', 'Sabra16G0262300' => 'sbr', 'Sabra18G0091700' => 'sbr', 'Sabra19G0095400' => 'sbr', 'SalBow6G3080' => 'sbo', 'SalBow7G1157' => 'sbo', 'SalBow7G2123' => 'sbo', 'SalBow7G2285' => 'sbo', 'SalBow7G3537' => 'sbo', 'SalBow8G2947' => 'sbo', 'SalBow8G4463' => 'sbo', 'SalBow8G5466' => 'sbo', 'Sc01g0001750' => 'sci', 'Sc02g0006640' => 'sci', 'Sc02g0006670' => 'sci', 'Sc04g0008220' => 'sci', 'Sc05g0006190' => 'sci', 'Sc08g0002760' => 'sci', 'Sc17g0006170' => 'sci', 'Sc22g0002050' => 'sci', 'Sc23g0001190' => 'sci', 'Sc24g0000980' => 'sci', 'Sed0006245' => 'sed', 'Sed0007543' => 'sed', 'Sed0009411' => 'sed', 'Sed0010765' => 'sed', 'Sed0012944' => 'sed', 'Sed0014682' => 'sed', 'Sed0016174' => 'sed', 'Sed0016796' => 'sed', 'Sed0020317' => 'sed', 'Sed0021467' => 'sed', 'SEGI_01316' => 'sgi', 'SEGI_03374' => 'sgi', 'SEGI_16265' => 'sgi', 'SEGI_18569' => 'sgi', 'SEGI_20351' => 'sgi', 'SEGI_26395' => 'sgi', 'SEGI_29469' => 'sgi', 'SEGI_34771' => 'sgi', 'SEGI_36769' => 'sgi', 'SEGI_37139' => 'sgi', 'SGA_v2.0_scaffold100G29687' => 'sas', 'SGA_v2.0_scaffold118G32472' => 'sas', 'SGA_v2.0_scaffold14G07051' => 'sas', 'SGA_v2.0_scaffold183G39845' => 'sas', 'SGA_v2.0_scaffold1G00174' => 'sas', 'SGA_v2.0_scaffold22G09714' => 'sas', 'SGA_v2.0_scaffold333G48992' => 'sas', 'SGA_v2.0_scaffold46G17491' => 'sas', 'SGA_v2.0_scaffold49G18294' => 'sas', 'SGA_v2.0_scaffold63G21658' => 'sas', 'SHI01741' => 'shi', 'SHI05771' => 'shi', 'SHI18077' => 'shi', 'SHI20525' => 'shi', 'SHI20527' => 'shi', 'SHI20528' => 'shi', 'SMO172G0185' => 'smo', 'SMO198G0020' => 'smo', 'SMO351G0006' => 'smo', 'SMO356G0118' => 'smo', 'SMO358G0296' => 'smo', 'SMO367G0079' => 'smo', 'SMO367G1277' => 'smo', 'Solyc01g014220.3' => 'sly', 'Solyc01g111770.2' => 'sly', 'Solyc02g078180.3' => 'sly', 'Solyc03g006430.3' => 'sly', 'Solyc03g006456.1' => 'sly', 'Solyc03g079860.2' => 'sly', 'Solyc04g079770.3' => 'sly', 'Solyc05g007430.4' => 'sly', 'Solyc07g063150.3' => 'sly', 'Solyc08g016620.3' => 'sly', 'Solyc09g057590.3' => 'sly', 'Solyc09g057600.1' => 'sly', 'Solyc10g009050.3' => 'sly', 'Solyc11g017420.2' => 'sly', 'Sopen01g053810' => 'spe', 'Sopen02g023040' => 'spe', 'Sopen03g002440' => 'spe', 'Sopen04g033350' => 'spe', 'Sopen05g003310' => 'spe', 'Sopen07g004050' => 'spe', 'Sopen07g031340' => 'spe', 'Sopen08g006990' => 'spe', 'Sopen10g004830' => 'spe', 'Sopen11g009370' => 'spe', 'Sp1g24450' => 'spa', 'Sp1g29670' => 'spa', 'Sp1g39600' => 'spa', 'Sp2g11080' => 'spa', 'Sp2g13970' => 'spa', 'Sp4g16130' => 'spa', 'Sp6g13080' => 'spa', 'Sp7g37270' => 'spa', 'TAR371G0065' => 'tar', 'TAR376G0340' => 'tar', 'TAR376G0435' => 'tar', 'TAR381G0002' => 'tar', 'TAR381G1236' => 'tar', 'TAR624G0055' => 'tar', 'TAR624G0324' => 'tar', 'TAR624G0696' => 'tar', 'TAR624G0906' => 'tar', 'TAR625G0107' => 'tar', 'TAR626G0015' => 'tar', 'TAR626G1356' => 'tar', 'TAR627G0888' => 'tar', 'TAR628G0399' => 'tar', 'TAR628G1327' => 'tar', 'TAR629G2831' => 'tar', 'TAR629G2874' => 'tar', 'TAR633G1432' => 'tar', 'TAR633G2771' => 'tar', 'THA.LOC104803394' => 'tha', 'THA.LOC104805153' => 'tha', 'THA.LOC104806784' => 'tha', 'THA.LOC104810473' => 'tha', 'THA.LOC104813100' => 'tha', 'THA.LOC104814215' => 'tha', 'THA.LOC104815554' => 'tha', 'THA.LOC104820544' => 'tha', 'THA.LOC104824754' => 'tha', 'THA.LOC104827717' => 'tha', 'Thecc.02G031400' => 'tca', 'Thecc.02G055900' => 'tca', 'Thecc.02G350800' => 'tca', 'Thecc.06G150900' => 'tca', 'Thecc.06G186600' => 'tca', 'Thecc.07G089600' => 'tca', 'Thecc.08G020400' => 'tca', 'Thecc.08G182100' => 'tca', 'Thhalv10000873m.g' => 'esa', 'Thhalv10004185m.g' => 'esa', 'Thhalv10006981m.g' => 'esa', 'Thhalv10007204m.g' => 'esa', 'Thhalv10011374m.g' => 'esa', 'Thhalv10013482m.g' => 'esa', 'Thhalv10017801m.g' => 'esa', 'Thhalv10024983m.g' => 'esa', 'TPR.G12072' => 'tpr', 'TPR.G15769' => 'tpr', 'TPR.G16504' => 'tpr', 'TPR.G16506' => 'tpr', 'TPR.G24345' => 'tpr', 'TPR.G26666' => 'tpr', 'TPR.G27320' => 'tpr', 'TPR.G31819' => 'tpr', 'TPR.G38879' => 'tpr', 'TPR.G39015' => 'tpr', 'TPR.G8819' => 'tpr', 'TWI09G0924' => 'twi', 'TWI12G0811' => 'twi', 'TWI12G1294' => 'twi', 'TWI31G0150' => 'twi', 'TWI36G1262' => 'twi', 'TWI38G1287' => 'twi', 'TWI38G1633' => 'twi', 'TWI38G1982' => 'twi', 'TWI39G0116' => 'twi', 'TWI60G1011' => 'twi', 'TWI63G0171' => 'twi', 'TWI73G0839' => 'twi', 'TWI79G1511' => 'twi', 'unitig_0.g915' => 'ugi', 'unitig_0.g916' => 'ugi', 'unitig_21.g20219' => 'ugi', 'unitig_21.g20416' => 'ugi', 'unitig_578.g16132' => 'ugi', 'unitig_578.g16718' => 'ugi', 'unitig_62.g23481' => 'ugi', 'unitig_744.g24535' => 'ugi', 'unitig_749.g13525' => 'ugi', 'vmacro01248' => 'vma', 'vmacro02290' => 'vma', 'vmacro10946' => 'vma', 'vmacro11865' => 'vma', 'vmacro12493' => 'vma', 'vmacro17322' => 'vma', 'vmacro21599' => 'vma', 'vmacro23041' => 'vma', 'VMungo0251G0004' => 'vmu', 'VMungo0251G2639' => 'vmu', 'VMungo0251G2967' => 'vmu', 'VMungo0540G0864' => 'vmu', 'VMungo0540G1569' => 'vmu', 'VMungo0647G0317' => 'vmu', 'VMungo0720G1373' => 'vmu', 'VMungo0720G1508' => 'vmu', 'VMungo1080G0485' => 'vmu', 'VMungo1215G3177' => 'vmu', 'Zm00001eb112600' => 'zma', 'Zm00001eb120220' => 'zma', 'Zm00001eb153240' => 'zma', 'Zm00001eb168880' => 'zma', 'Zm00001eb213920' => 'zma', 'Zm00001eb228280' => 'zma', 'Zm00001eb254580' => 'zma', 'Zm00001eb272180' => 'zma', 'Zm00001eb293190' => 'zma', 'Zm00001eb322930' => 'zma', 'Zm00001eb353360' => 'zma', 'Zm00001eb353390' => 'zma', 'Zm00001eb353430' => 'zma', 'Zm00001eb353440' => 'zma', 'Zm00001eb353780' => 'zma' ), 'gf_id' => 'HOM05D000499', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000499' ), 'data_identifier' => 'HOM05D000499', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000499', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1066', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p29780' => 'bna', 'A02p33180' => 'bna', 'A03p16470' => 'bna', 'A03p66010' => 'bna', 'A04p25970' => 'bna', 'A06p01270' => 'bna', 'A06p46080' => 'bna', 'A07p11400' => 'bna', 'A08p01840' => 'bna', 'A08p08230' => 'bna', 'A08p25740' => 'bna', 'A09p32070' => 'bna', 'A09p37830' => 'bna', 'A09p42840' => 'bna', 'A09p42850' => 'bna', 'Aa31LG10G2060' => 'aar', 'Aa31LG2G7410' => 'aar', 'Aa31LG6G10200' => 'aar', 'Aa31LG6G16680' => 'aar', 'Aa31LG6G8470' => 'aar', 'Aa31LG9G12730' => 'aar', 'Aa31LG9G13680' => 'aar', 'Aa31LG9G14920' => 'aar', 'Aa31LG9G6650' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4977' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5467' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3254' => 'aag', 'Actinidia02578' => 'ach', 'Actinidia07693' => 'ach', 'Actinidia08413' => 'ach', 'Actinidia08414' => 'ach', 'Actinidia15289' => 'ach', 'Actinidia19871' => 'ach', 'Actinidia21475' => 'ach', 'Actinidia22576' => 'ach', 'Actinidia28327' => 'ach', 'Actinidia32491' => 'ach', 'Actinidia39463' => 'ach', 'Actinidia39571' => 'ach', 'Ah.01g013750' => 'amhyb', 'Ah.01g023210' => 'amhyb', 'Ah.04g164850' => 'amhyb', 'Ah.05g178060' => 'amhyb', 'Ah.07g204270' => 'amhyb', 'Ah.07g208480' => 'amhyb', 'Ah.09g237410' => 'amhyb', 'Ah.14g089460' => 'amhyb', 'AL1G41790' => 'aly', 'AL1G49050' => 'aly', 'AL1G53810' => 'aly', 'AL1G61400' => 'aly', 'AL4G18580' => 'aly', 'AL5G12510' => 'aly', 'AL5G12540' => 'aly', 'AL6G43230' => 'aly', 'AL7G10370' => 'aly', 'AL7G19250' => 'aly', 'AL8G12240' => 'aly', 'AL8G18540' => 'aly', 'Aqoxy1G02409' => 'aox', 'Aqoxy2G03993' => 'aox', 'Aqoxy3G03357' => 'aox', 'Aqoxy4G00785' => 'aox', 'Aqoxy5G02598' => 'aox', 'Aqoxy6G00132' => 'aox', 'Aqoxy7G01776' => 'aox', 'Aqoxy7G02316' => 'aox', 'Aqoxy7G03973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.12AFKW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B8730' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27IQR1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3F75VG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3RE0GA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41TCQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.527VTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FIR39' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5W8UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DA38EV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ63HS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H1I32C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HC27T5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4M8AP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7N3CZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9UVDZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LS1NQA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT1D4B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SKC4TM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCFV76' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF9Q1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQWD9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1ZM88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WE07RT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YCK7VH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJE6Q6' => 'arhy', 'AT1G28240' => 'ath', 'AT1G34550' => 'ath', 'AT1G53040' => 'ath', 'AT2G02910' => 'ath', 'AT4G09630' => 'ath', 'AT4G38500' => 'ath', 'AT5G42660' => 'ath', 'AT5G46220' => 'ath', 'ATR0152G026' => 'atr', 'ATR0564G343' => 'atr', 'ATR0706G151' => 'atr', 'ATR0733G207' => 'atr', 'ATR0751G234' => 'atr', 'ATR0807G048' => 'atr', 'ATR1091G084' => 'atr', 'Atru.chr10.1229' => 'acertr', 'Atru.chr10.1230' => 'acertr', 'Atru.chr10.1874' => 'acertr', 'Atru.chr11.1808' => 'acertr', 'Atru.chr13.1795' => 'acertr', 'Atru.chr13.570' => 'acertr', 'Atru.chr2.2608' => 'acertr', 'Atru.chr2.2609' => 'acertr', 'Atru.chr5.3428' => 'acertr', 'Atru.chr8.1171' => 'acertr', 'AUR62004651' => 'cqu', 'AUR62008675' => 'cqu', 'AUR62010014' => 'cqu', 'AUR62013004' => 'cqu', 'AUR62014825' => 'cqu', 'AUR62015015' => 'cqu', 'AUR62015151' => 'cqu', 'AUR62017020' => 'cqu', 'AUR62019422' => 'cqu', 'AUR62023570' => 'cqu', 'AUR62025571' => 'cqu', 'AUR62029098' => 'cqu', 'AUR62033863' => 'cqu', 'AUR62034296' => 'cqu', 'AUR62040075' => 'cqu', 'BcaB02g07334' => 'bca', 'BcaB02g10575' => 'bca', 'BcaB03g12119' => 'bca', 'BcaB03g12120' => 'bca', 'BcaB03g13945' => 'bca', 'BcaB04g17123' => 'bca', 'BcaB04g17867' => 'bca', 'BcaB04g19839' => 'bca', 'BcaB07g30317' => 'bca', 'BcaB07g32432' => 'bca', 'BcaB07g33362' => 'bca', 'BcaB08g36611' => 'bca', 'BcaC01g00028' => 'bca', 'BcaC01g01356' => 'bca', 'BcaC01g02034' => 'bca', 'BcaC01g06051' => 'bca', 'BcaC03g16839' => 'bca', 'BcaC03g17176' => 'bca', 'BcaC05g26829' => 'bca', 'BcaC06g31490' => 'bca', 'BcaC06g35344' => 'bca', 'BcaC06g36570' => 'bca', 'BcaC07g37537' => 'bca', 'BcaC08g43491' => 'bca', 'BcaC08g43773' => 'bca', 'BcaNung00234' => 'bca', 'BcaNung01982' => 'bca', 'BcaNung03707' => 'bca', 'BcaNung06454' => 'bca', 'BolC2t10762H' => 'bol', 'BolC2t11191H' => 'bol', 'BolC3t14322H' => 'bol', 'BolC3t19747H' => 'bol', 'BolC3t21425H' => 'bol', 'BolC4t27800H' => 'bol', 'BolC5t31423H' => 'bol', 'BolC6t35951H' => 'bol', 'BolC6t36282H' => 'bol', 'BolC7t40678H' => 'bol', 'BolC7t40679H' => 'bol', 'BolC7t42222H' => 'bol', 'BolC7t43492H' => 'bol', 'BolC7t46785H' => 'bol', 'BolC8t47853H' => 'bol', 'BolC9t56805H' => 'bol', 'BraA02t08000Z' => 'bra', 'BraA02t08341Z' => 'bra', 'BraA03t10936Z' => 'bra', 'BraA03t15657Z' => 'bra', 'BraA04t18100Z' => 'bra', 'BraA05t20523Z' => 'bra', 'BraA06t23353Z' => 'bra', 'BraA06t27473Z' => 'bra', 'BraA06t27769Z' => 'bra', 'BraA07t28928Z' => 'bra', 'BraA08t32236Z' => 'bra', 'BraA08t32841Z' => 'bra', 'BraA08t34524Z' => 'bra', 'BraA09t38742Z' => 'bra', 'BraA09t39295Z' => 'bra', 'C02p47180' => 'bna', 'C02p50990' => 'bna', 'C03p19360' => 'bna', 'C03p74950' => 'bna', 'C03p91000' => 'bna', 'C04p63260' => 'bna', 'C05p27050' => 'bna', 'C06p08750' => 'bna', 'C06p11490' => 'bna', 'C07p02820' => 'bna', 'C07p17180' => 'bna', 'C07p29440' => 'bna', 'C07p63730' => 'bna', 'C09p39260' => 'bna', 'CAN.G1164.34' => 'can', 'CAN.G1164.39' => 'can', 'CAN.G1530.3' => 'can', 'CAN.G162.61' => 'can', 'CAN.G176.6' => 'can', 'CAN.G289.49' => 'can', 'CAN.G370.21' => 'can', 'CAN.G370.22' => 'can', 'CAN.G371.117' => 'can', 'CAN.G58.37' => 'can', 'CAN.G588.98' => 'can', 'CANSAT21G2266' => 'cansat', 'CANSAT25G2799' => 'cansat', 'CANSAT35G0862' => 'cansat', 'CANSAT35G1704' => 'cansat', 'CANSAT35G1760' => 'cansat', 'CANSAT56G3971' => 'cansat', 'CANSAT56G4116' => 'cansat', 'CANSAT80G1259' => 'cansat', 'CARHR027730' => 'chi', 'CARHR033880' => 'chi', 'CARHR043270' => 'chi', 'CARHR145330' => 'chi', 'CARHR145340' => 'chi', 'CARHR175570' => 'chi', 'CARHR181570' => 'chi', 'CARHR258470' => 'chi', 'CARHR260490' => 'chi', 'CARHR294220' => 'chi', 'Carub.0001s2668' => 'cru', 'Carub.0001s3257' => 'cru', 'Carub.0001s4220' => 'cru', 'Carub.0005s0179' => 'cru', 'Carub.0006s2807' => 'cru', 'Carub.0007s0039' => 'cru', 'Carub.0008s0169' => 'cru', 'Carub.0008s0636' => 'cru', 'Ca_00338_v3' => 'car', 'Ca_00542_v3' => 'car', 'Ca_01844_v3' => 'car', 'Ca_10611_v3' => 'car', 'Ca_13326_v3' => 'car', 'Ca_17944_v3' => 'car', 'Ca_18546_v3' => 'car', 'Ca_24219_v3' => 'car', 'Ca_29972_v3' => 'car', 'CBR_g3681' => 'cbr', 'CBR_g40021' => 'cbr', 'Cc01_g08140' => 'ccan', 'Cc02_g13410' => 'ccan', 'Cc02_g37480' => 'ccan', 'Cc05_g12030' => 'ccan', 'Cc09_g03370' => 'ccan', 'Cc09_g10300' => 'ccan', 'Cc10_g03530' => 'ccan', 'Cc10_g11380' => 'ccan', 'CDE01G0176' => 'cde', 'CDE02G0675' => 'cde', 'CDE02G0942' => 'cde', 'CDE02G1153' => 'cde', 'CDE02G4177' => 'cde', 'CDE04G2117' => 'cde', 'CDE04G2736' => 'cde', 'CDE08G1161' => 'cde', 'CDE09G1238' => 'cde', 'Cfa000467' => 'cfa', 'Cfa000947' => 'cfa', 'Cfa004969' => 'cfa', 'Cfa005284' => 'cfa', 'Cfa008993' => 'cfa', 'Cfa018187' => 'cfa', 'Cfa018454' => 'cfa', 'Cfa020585' => 'cfa', 'Ciclev10000424m.g' => 'ccl', 'Ciclev10003605m.g' => 'ccl', 'Ciclev10007828m.g' => 'ccl', 'Ciclev10014620m.g' => 'ccl', 'Ciclev10015169m.g' => 'ccl', 'Ciclev10018291m.g' => 'ccl', 'Ciclev10028256m.g' => 'ccl', 'Ciclev10033822m.g' => 'ccl', 'CiPaw.05G060300' => 'cil', 'CiPaw.05G085000' => 'cil', 'CiPaw.06G083700' => 'cil', 'CiPaw.06G120300' => 'cil', 'CiPaw.09G060500' => 'cil', 'CiPaw.09G123800' => 'cil', 'CiPaw.11G169700' => 'cil', 'CiPaw.12G118300' => 'cil', 'CiPaw.15G071000' => 'cil', 'CiPaw.15G081900' => 'cil', 'ClCG01G024610' => 'cla', 'ClCG03G006070' => 'cla', 'ClCG05G019250' => 'cla', 'ClCG09G009500' => 'cla', 'ClCG11G008200' => 'cla', 'ClCG11G018080' => 'cla', 'COL.COLO4_17373' => 'col', 'COL.COLO4_22994' => 'col', 'COL.COLO4_26389' => 'col', 'COL.COLO4_27170' => 'col', 'COL.COLO4_31074' => 'col', 'COL.COLO4_31465' => 'col', 'COL.COLO4_36438' => 'col', 'COL.COLO4_36439' => 'col', 'Cpa.g.c38781' => 'cpa', 'Cpa.g.sc128.12' => 'cpa', 'Cpa.g.sc166.7' => 'cpa', 'Cpa.g.sc166.8' => 'cpa', 'Cpa.g.sc20.111' => 'cpa', 'Cpa.g.sc27.31' => 'cpa', 'Cpa.g.sc64.36' => 'cpa', 'Cpa.g.sc64.37' => 'cpa', 'Cpa.g.sc66.49' => 'cpa', 'Cpa.g.sc80.64' => 'cpa', 'CsaV3_1G012320' => 'csa', 'CsaV3_2G008480' => 'csa', 'CsaV3_2G033450' => 'csa', 'CsaV3_3G044830' => 'csa', 'CsaV3_4G033710' => 'csa', 'CsaV3_6G051730' => 'csa', 'CsaV3_7G025350' => 'csa', 'CSS0001067' => 'camsi', 'CSS0005996' => 'camsi', 'CSS0006590' => 'camsi', 'CSS0009673' => 'camsi', 'CSS0010201' => 'camsi', 'CSS0010549' => 'camsi', 'CSS0011364' => 'camsi', 'CSS0014473' => 'camsi', 'CSS0014961' => 'camsi', 'CSS0020191' => 'camsi', 'CSS0021165' => 'camsi', 'CSS0022306' => 'camsi', 'CSS0030591' => 'camsi', 'CSS0030696' => 'camsi', 'CSS0032653' => 'camsi', 'CSS0037487' => 'camsi', 'CSS0041102' => 'camsi', 'CSS0041261' => 'camsi', 'CSS0046246' => 'camsi', 'CSS0049256' => 'camsi', 'DCAR_004075' => 'dca', 'DCAR_011538' => 'dca', 'DCAR_019553' => 'dca', 'DCAR_020952' => 'dca', 'DCAR_021739' => 'dca', 'DCAR_027407' => 'dca', 'DCAR_027913' => 'dca', 'DCAR_028066' => 'dca', 'Dinv05899' => 'din', 'Dinv07563' => 'din', 'Dinv08010' => 'din', 'Dinv14125' => 'din', 'Dinv20172' => 'din', 'Dinv30743' => 'din', 'Dinv31229' => 'din', 'Dinv34162' => 'din', 'Dinv36028' => 'din', 'Dinv39368' => 'din', 'Dinv40565' => 'din', 'Dinv41706' => 'din', 'Duzib052G0089' => 'dzi', 'Duzib116G0641' => 'dzi', 'Duzib132G0069' => 'dzi', 'Duzib132G1219' => 'dzi', 'Duzib147G0278' => 'dzi', 'Duzib160G0480' => 'dzi', 'Duzib170G0661' => 'dzi', 'Duzib177G0591' => 'dzi', 'Duzib187G1353' => 'dzi', 'Duzib192G0858' => 'dzi', 'Duzib192G0883' => 'dzi', 'Duzib213G0506' => 'dzi', 'Duzib235G0289' => 'dzi', 'Duzib251G0422' => 'dzi', 'ECA232G3898' => 'eca', 'ECA233G5950' => 'eca', 'ECA234G1699' => 'eca', 'ECA234G2421' => 'eca', 'ECA236G0426' => 'eca', 'ECA236G4331' => 'eca', 'ECA248G2573' => 'eca', 'EL10Ac1g00077' => 'bvu', 'EL10Ac1g01746' => 'bvu', 'EL10Ac2g03464' => 'bvu', 'EL10Ac4g08176' => 'bvu', 'EL10Ac7g17521' => 'bvu', 'EL10Ac8g20386' => 'bvu', 'EL10Ac9g21343' => 'bvu', 'EL10Ac9g22688' => 'bvu', 'Eucgr.B03434' => 'egr', 'Eucgr.D00618' => 'egr', 'Eucgr.E02395' => 'egr', 'Eucgr.F01129' => 'egr', 'Eucgr.F02622' => 'egr', 'Eucgr.F04207' => 'egr', 'FAN01G0570' => 'fan', 'FAN03G3351' => 'fan', 'FAN06G3702' => 'fan', 'FAN07G2149' => 'fan', 'FAN10G3758' => 'fan', 'FAN11G1170' => 'fan', 'FAN11G2050' => 'fan', 'FAN11G2724' => 'fan', 'FAN12G1700' => 'fan', 'FAN12G2028' => 'fan', 'FAN15G1160' => 'fan', 'FAN15G3063' => 'fan', 'FAN16G2540' => 'fan', 'FAN16G3077' => 'fan', 'FAN16G3624' => 'fan', 'FAN17G0221' => 'fan', 'FAN20G2492' => 'fan', 'FAN20G2905' => 'fan', 'FAN21G0548' => 'fan', 'FAN21G1300' => 'fan', 'FAN22G0077' => 'fan', 'FAN22G1315' => 'fan', 'FAN24G1280' => 'fan', 'FAN24G1445' => 'fan', 'FAN24G3527' => 'fan', 'FAN25G0464' => 'fan', 'FAN25G2885' => 'fan', 'FAN25G3270' => 'fan', 'FAN27G1101' => 'fan', 'FAN27G2846' => 'fan', 'FAN27G3524' => 'fan', 'FvH4_2g11770' => 'fve', 'FvH4_2g15630' => 'fve', 'FvH4_3g05570' => 'fve', 'FvH4_3g09110' => 'fve', 'FvH4_3g19940' => 'fve', 'FvH4_4g04821' => 'fve', 'FvH4_4g31480' => 'fve', 'FvH4_7g01740' => 'fve', 'Glyma.05G130400' => 'gma', 'Glyma.05G156400' => 'gma', 'Glyma.07G197000' => 'gma', 'Glyma.08G085151' => 'gma', 'Glyma.08G114500' => 'gma', 'Glyma.08G300400' => 'gma', 'Glyma.10G215800' => 'gma', 'Glyma.12G224400' => 'gma', 'Glyma.13G179300' => 'gma', 'Glyma.13G218151' => 'gma', 'Glyma.13G238800' => 'gma', 'Glyma.13G276900' => 'gma', 'Glyma.14G078200' => 'gma', 'Glyma.15G074500' => 'gma', 'Glyma.15G094100' => 'gma', 'Glyma.17G247200' => 'gma', 'Glyma.18G120100' => 'gma', 'Glyma.20G176000' => 'gma', 'Gohir.A01G063600' => 'ghi', 'Gohir.A01G170301' => 'ghi', 'Gohir.A02G060500' => 'ghi', 'Gohir.A05G133850' => 'ghi', 'Gohir.A05G161400' => 'ghi', 'Gohir.A06G012900' => 'ghi', 'Gohir.A06G035901' => 'ghi', 'Gohir.A06G127100' => 'ghi', 'Gohir.A06G210500' => 'ghi', 'Gohir.A08G008650' => 'ghi', 'Gohir.A09G072700' => 'ghi', 'Gohir.A09G088301' => 'ghi', 'Gohir.A10G040600' => 'ghi', 'Gohir.A12G036300' => 'ghi', 'Gohir.A12G143350' => 'ghi', 'Gohir.A12G165500' => 'ghi', 'Gohir.A13G145700' => 'ghi', 'Gohir.D01G050000' => 'ghi', 'Gohir.D01G051366' => 'ghi', 'Gohir.D01G161350' => 'ghi', 'Gohir.D02G065900' => 'ghi', 'Gohir.D05G164200' => 'ghi', 'Gohir.D05G355500' => 'ghi', 'Gohir.D06G010400' => 'ghi', 'Gohir.D06G111250' => 'ghi', 'Gohir.D06G132000' => 'ghi', 'Gohir.D06G210500' => 'ghi', 'Gohir.D07G165675' => 'ghi', 'Gohir.D08G062240' => 'ghi', 'Gohir.D08G086101' => 'ghi', 'Gohir.D08G138060' => 'ghi', 'Gohir.D09G072300' => 'ghi', 'Gohir.D10G041400' => 'ghi', 'Gohir.D11G191020' => 'ghi', 'Gohir.D11G212066' => 'ghi', 'Gohir.D12G036300' => 'ghi', 'Gohir.D12G168600' => 'ghi', 'Gohir.D13G150600' => 'ghi', 'Gorai.001G057300' => 'gra', 'Gorai.002G069900' => 'gra', 'Gorai.002G200000' => 'gra', 'Gorai.003G067600' => 'gra', 'Gorai.005G074800' => 'gra', 'Gorai.006G087300' => 'gra', 'Gorai.008G037500' => 'gra', 'Gorai.008G181400' => 'gra', 'Gorai.009G169400' => 'gra', 'Gorai.009G387900' => 'gra', 'Gorai.010G013300' => 'gra', 'Gorai.010G153800' => 'gra', 'Gorai.010G255800' => 'gra', 'Gorai.011G043700' => 'gra', 'Gorai.011G198900' => 'gra', 'Gorai.013G168400' => 'gra', 'GSVIVG01005212001' => 'vvi', 'GSVIVG01006163001' => 'vvi', 'GSVIVG01009625001' => 'vvi', 'GSVIVG01014338001' => 'vvi', 'GSVIVG01020005001' => 'vvi', 'GSVIVG01021450001' => 'vvi', 'GSVIVG01023975001' => 'vvi', 'GSVIVG01034490001' => 'vvi', 'HanXRQChr04g0112071' => 'han', 'HanXRQChr05g0131151' => 'han', 'HanXRQChr09g0262371' => 'han', 'HanXRQChr09g0268401' => 'han', 'HanXRQChr10g0279241' => 'han', 'HanXRQChr10g0297961' => 'han', 'HanXRQChr11g0326231' => 'han', 'HanXRQChr11g0328471' => 'han', 'HanXRQChr16g0507941' => 'han', 'HanXRQChr17g0560211' => 'han', 'Haze_02108' => 'cav', 'Haze_02428' => 'cav', 'Haze_05593' => 'cav', 'Haze_06448' => 'cav', 'Haze_09427' => 'cav', 'Haze_12022' => 'cav', 'Haze_17612' => 'cav', 'Haze_17928' => 'cav', 'Hma1.2p1_0032F.1_g019250' => 'hma', 'Hma1.2p1_0163F.1_g072690' => 'hma', 'Hma1.2p1_0265F.1_g106710' => 'hma', 'Hma1.2p1_0286F.1_g113970' => 'hma', 'Hma1.2p1_0363F.1_g136640' => 'hma', 'Hma1.2p1_0584F.1_g183470' => 'hma', 'Hma1.2p1_0885F.1_g232570' => 'hma', 'HPP92_006022' => 'vpl', 'HPP92_007320' => 'vpl', 'HPP92_011521' => 'vpl', 'HPP92_019387' => 'vpl', 'HPP92_024038' => 'vpl', 'Hund05891' => 'sun', 'Hund06450' => 'sun', 'Hund12053' => 'sun', 'Hund16800' => 'sun', 'Hund21222' => 'sun', 'Hund22896' => 'sun', 'Hund23746' => 'sun', 'Hund27083' => 'sun', 'Lalb_Chr02g0141831' => 'lal', 'Lalb_Chr02g0141841' => 'lal', 'Lalb_Chr05g0220411' => 'lal', 'Lalb_Chr06g0162081' => 'lal', 'Lalb_Chr09g0327651' => 'lal', 'Lalb_Chr13g0295051' => 'lal', 'Lalb_Chr15g0086801' => 'lal', 'Lalb_Chr16g0383781' => 'lal', 'Lalb_Chr16g0383791' => 'lal', 'Lalb_Chr18g0055441' => 'lal', 'Lalb_Chr18g0059611' => 'lal', 'Lalb_Chr20g0109661' => 'lal', 'Lalb_Chr20g0109831' => 'lal', 'Lalb_Chr20g0121871' => 'lal', 'Lalb_Chr22g0355361' => 'lal', 'Lalb_Chr25g0286371' => 'lal', 'Lj1A1187G43' => 'lonja', 'Lj1A1205T50' => 'lonja', 'Lj1A800G33' => 'lonja', 'Lj1C1187T7' => 'lonja', 'Lj1C843T11' => 'lonja', 'Lj1g0010940' => 'lja', 'Lj2A288T69' => 'lonja', 'Lj3g0024276' => 'lja', 'Lj4A47T76' => 'lonja', 'Lj4g0005805' => 'lja', 'Lj4g0006097' => 'lja', 'Lj4g0008528' => 'lja', 'Lj4g0024907' => 'lja', 'Lj5g0012472' => 'lja', 'Lj5g0018648' => 'lja', 'Lj6C789G1' => 'lonja', 'Lj6g0004000' => 'lja', 'Lj7A292G67' => 'lonja', 'Lj7A292T64' => 'lonja', 'Lj9A400T58' => 'lonja', 'Lsat_1_v5_gn_1_126181' => 'lsa', 'Lsat_1_v5_gn_4_123041' => 'lsa', 'Lsat_1_v5_gn_4_133620' => 'lsa', 'Lsat_1_v5_gn_4_53221' => 'lsa', 'Lsat_1_v5_gn_4_71961' => 'lsa', 'Lsat_1_v5_gn_7_105241' => 'lsa', 'Lsat_1_v5_gn_7_21361' => 'lsa', 'Lsat_1_v5_gn_7_28860' => 'lsa', 'Lsat_1_v5_gn_7_31260' => 'lsa', 'Lsat_1_v5_gn_8_52801' => 'lsa', 'Manes.02G191400' => 'mes', 'Manes.03G110100' => 'mes', 'Manes.04G071100' => 'mes', 'Manes.05G100500' => 'mes', 'Manes.05G164700' => 'mes', 'Manes.15G087000' => 'mes', 'Manes.15G121500' => 'mes', 'Manes.16G028300' => 'mes', 'Manes.17G046100' => 'mes', 'Manes.17G069800' => 'mes', 'Manes.18G100500' => 'mes', 'Mapoly0002s0109' => 'mpo', 'Mapoly0024s0007' => 'mpo', 'Mapoly0089s0032' => 'mpo', 'MBI04_g42241_MAGBIO' => 'mbi', 'MBI05_g11988_MAGBIO' => 'mbi', 'MBI05_g35452_MAGBIO' => 'mbi', 'MBI07_g30179_MAGBIO' => 'mbi', 'MBI07_g35859_MAGBIO' => 'mbi', 'MBI07_g35860_MAGBIO' => 'mbi', 'MBI07_g37166_MAGBIO' => 'mbi', 'MBI08_g18172_MAGBIO' => 'mbi', 'MBI09_g08441_MAGBIO' => 'mbi', 'MBI13_g01676_MAGBIO' => 'mbi', 'MBI14_g42955_MAGBIO' => 'mbi', 'MBI16_g13161_MAGBIO' => 'mbi', 'MBI17_g27204_MAGBIO' => 'mbi', 'MBI19_g21595_MAGBIO' => 'mbi', 'MD00G1148400' => 'mdo', 'MD02G1301200' => 'mdo', 'MD03G1227800' => 'mdo', 'MD05G1041100' => 'mdo', 'MD05G1124800' => 'mdo', 'MD05G1284000' => 'mdo', 'MD05G1338800' => 'mdo', 'MD05G1338900' => 'mdo', 'MD07G1022800' => 'mdo', 'MD10G1047500' => 'mdo', 'MD10G1127500' => 'mdo', 'MD10G1262300' => 'mdo', 'MD10G1293800' => 'mdo', 'MD16G1074300' => 'mdo', 'Medtr1g021670' => 'mtr', 'Medtr1g096320' => 'mtr', 'Medtr2g013690' => 'mtr', 'Medtr2g019450' => 'mtr', 'Medtr2g085170' => 'mtr', 'Medtr4g088785' => 'mtr', 'Medtr8g055930' => 'mtr', 'Medtr8g085850' => 'mtr', 'MELO3C002605.2' => 'cme', 'MELO3C003891.2' => 'cme', 'MELO3C004012.2' => 'cme', 'MELO3C007134.2' => 'cme', 'MELO3C008118.2' => 'cme', 'MELO3C016700.2' => 'cme', 'MELO3C024127.2' => 'cme', 'MELO3C033361.2' => 'cme', 'MELO3C033362.2' => 'cme', 'Migut.C00430' => 'egut', 'Migut.C01246' => 'egut', 'Migut.E00101' => 'egut', 'Migut.H01486' => 'egut', 'Migut.H01939' => 'egut', 'Migut.K00360' => 'egut', 'Migut.M00910' => 'egut', 'Migut.M01139' => 'egut', 'Migut.N02677' => 'egut', 'MSTRG.13252' => 'ama', 'MSTRG.14701' => 'ama', 'MSTRG.1521' => 'ama', 'MSTRG.15884' => 'ama', 'MSTRG.16242' => 'ama', 'MSTRG.22285' => 'ama', 'MSTRG.22444' => 'ama', 'MSTRG.2349' => 'ama', 'MSTRG.26308' => 'ama', 'MSTRG.28296' => 'ama', 'MSTRG.9895' => 'ama', 'Nitab4.5_0000110g0060' => 'nta', 'Nitab4.5_0000420g0130' => 'nta', 'Nitab4.5_0000422g0030' => 'nta', 'Nitab4.5_0000560g0180' => 'nta', 'Nitab4.5_0000703g0100' => 'nta', 'Nitab4.5_0000786g0200' => 'nta', 'Nitab4.5_0001336g0020' => 'nta', 'Nitab4.5_0001796g0030' => 'nta', 'Nitab4.5_0003348g0060' => 'nta', 'Nitab4.5_0003698g0040' => 'nta', 'Nitab4.5_0003942g0090' => 'nta', 'Nitab4.5_0004775g0070' => 'nta', 'Nitab4.5_0004864g0030' => 'nta', 'Nitab4.5_0005615g0020' => 'nta', 'Nitab4.5_0009288g0030' => 'nta', 'Nitab4.5_0009341g0010' => 'nta', 'Nitab4.5_0009535g0010' => 'nta', 'Nn1g03995' => 'nnu', 'Nn1g04100' => 'nnu', 'Nn1g06530' => 'nnu', 'Nn3g16404' => 'nnu', 'Nn3g17212' => 'nnu', 'Nn3g20776' => 'nnu', 'Nn3g21923' => 'nnu', 'Nn5g27737' => 'nnu', 'Nn5g29461' => 'nnu', 'Nn7g38355' => 'nnu', 'Nn8g39873' => 'nnu', 'Oeu000548.2' => 'oeu', 'Oeu004672.1' => 'oeu', 'Oeu015605.2' => 'oeu', 'Oeu016092.1' => 'oeu', 'Oeu017879.3' => 'oeu', 'Oeu024910.1' => 'oeu', 'Oeu028965.1' => 'oeu', 'Oeu031269.1' => 'oeu', 'Oeu031270.1' => 'oeu', 'Oeu032535.1' => 'oeu', 'Oeu034151.1' => 'oeu', 'Oeu034152.1' => 'oeu', 'Oeu034588.2' => 'oeu', 'Oeu050846.1' => 'oeu', 'Oeu050849.2' => 'oeu', 'Oeu051063.2' => 'oeu', 'Oeu052368.1' => 'oeu', 'Oeu052370.1' => 'oeu', 'Os01g0210400' => 'osa', 'Os01g0304300' => 'osa', 'Os01g0749100' => 'osa', 'Os02g0745800' => 'osa', 'Os03g0769050' => 'osa', 'Os05g0531500' => 'osa', 'Os06g0724300' => 'osa', 'Os11g0198100' => 'osa', 'Peaxi162Scf00069g01425' => 'pax', 'Peaxi162Scf00280g00811' => 'pax', 'Peaxi162Scf00310g00615' => 'pax', 'Peaxi162Scf00362g00542' => 'pax', 'Peaxi162Scf00461g00310' => 'pax', 'Peaxi162Scf00530g00118' => 'pax', 'Peaxi162Scf00541g00057' => 'pax', 'Peaxi162Scf00661g00017' => 'pax', 'Peaxi162Scf00926g00027' => 'pax', 'Peaxi162Scf01064g00263' => 'pax', 'Peaxi162Scf01211g00135' => 'pax', 'PGR004G2336' => 'pgr', 'PGR042G0327' => 'pgr', 'PGR042G1957' => 'pgr', 'PGR042G2003' => 'pgr', 'PGR042G3929' => 'pgr', 'PGR083G1137' => 'pgr', 'PGR083G1364' => 'pgr', 'PGSC0003DMG400003381' => 'stu', 'PGSC0003DMG400003417' => 'stu', 'PGSC0003DMG400008981' => 'stu', 'PGSC0003DMG400012417' => 'stu', 'PGSC0003DMG400012823' => 'stu', 'PGSC0003DMG400016885' => 'stu', 'PGSC0003DMG400022812' => 'stu', 'PGSC0003DMG400029726' => 'stu', 'PGSC0003DMG401009243' => 'stu', 'PGSC0003DMG401031505' => 'stu', 'PGSC0003DMG402031505' => 'stu', 'Phvul.001G017600' => 'pvu', 'Phvul.002G193500' => 'pvu', 'Phvul.002G228900' => 'pvu', 'Phvul.002G236800' => 'pvu', 'Phvul.003G049500' => 'pvu', 'Phvul.005G072000' => 'pvu', 'Phvul.006G164800' => 'pvu', 'Phvul.006G185100' => 'pvu', 'Phvul.007G090000' => 'pvu', 'Potri.001G399800' => 'ptr', 'Potri.002G149900' => 'ptr', 'Potri.004G044100' => 'ptr', 'Potri.004G177600' => 'ptr', 'Potri.009G138000' => 'ptr', 'Potri.010G094000' => 'ptr', 'Potri.011G053000' => 'ptr', 'Potri.011G119300' => 'ptr', 'Potri.013G113700' => 'ptr', 'Potri.018G107800' => 'ptr', 'Potri.019G084100' => 'ptr', 'Pp3c14_23720' => 'ppa', 'Pp3c16_6340' => 'ppa', 'Pp3c23_13420' => 'ppa', 'Pp3c24_2740' => 'ppa', 'Pp3c25_860' => 'ppa', 'Pp3c8_21750' => 'ppa', 'Prupe.1G273000' => 'ppe', 'Prupe.1G273700' => 'ppe', 'Prupe.1G274100' => 'ppe', 'Prupe.2G023300' => 'ppe', 'Prupe.4G048000' => 'ppe', 'Prupe.4G080400' => 'ppe', 'Prupe.4G181200' => 'ppe', 'Prupe.8G056900' => 'ppe', 'Prupe.8G168700' => 'ppe', 'Psat1g189080' => 'psa', 'Psat1g204760' => 'psa', 'Psat4g175560' => 'psa', 'Psat4g177720' => 'psa', 'Psat5g244240' => 'psa', 'Psat6g010720' => 'psa', 'Psat6g187200' => 'psa', 'Psat7g072040' => 'psa', 'PSO017G3501' => 'pso', 'PSO063G2148' => 'pso', 'PSO063G5608' => 'pso', 'PSO210G6392' => 'pso', 'PSO541G2319' => 'pso', 'PSO541G2836' => 'pso', 'PSO541G4012' => 'pso', 'PSO541G6253' => 'pso', 'PSO675G0580' => 'pso', 'PSO675G0856' => 'pso', 'PSO675G5635' => 'pso', 'PSO675G9157' => 'pso', 'PSO832G1660' => 'pso', 'PSO832G1969' => 'pso', 'QL02p007186' => 'qlo', 'QL02p033904' => 'qlo', 'QL03p064391' => 'qlo', 'QL05p040593' => 'qlo', 'QL05p058242' => 'qlo', 'QL08p021825' => 'qlo', 'QL11p004981' => 'qlo', 'RcHm_v2.0_Chr1g0318301' => 'rch', 'RcHm_v2.0_Chr4g0418501' => 'rch', 'RcHm_v2.0_Chr4g0439971' => 'rch', 'RcHm_v2.0_Chr5g0008541' => 'rch', 'RcHm_v2.0_Chr5g0014101' => 'rch', 'RcHm_v2.0_Chr5g0014131' => 'rch', 'RcHm_v2.0_Chr5g0033621' => 'rch', 'RcHm_v2.0_Chr6g0272041' => 'rch', 'RcHm_v2.0_Chr6g0278831' => 'rch', 'Rhsim02G0130400' => 'rsi', 'Rhsim02G0171100' => 'rsi', 'Rhsim05G0053000' => 'rsi', 'Rhsim05G0053100' => 'rsi', 'Rhsim06G0096500' => 'rsi', 'Rhsim06G0096600' => 'rsi', 'Rhsim06G0199100' => 'rsi', 'Rhsim12G0062300' => 'rsi', 'Rhsim12G0062800' => 'rsi', 'Sabra02G0118600' => 'sbr', 'Sabra04G0027300' => 'sbr', 'Sabra04G0119500' => 'sbr', 'Sabra08G0112500' => 'sbr', 'Sabra11G0036800' => 'sbr', 'Sabra11G0103800' => 'sbr', 'Sabra13G0096300' => 'sbr', 'Sabra16G0262300' => 'sbr', 'Sabra18G0091700' => 'sbr', 'Sabra19G0095400' => 'sbr', 'SalBow6G3080' => 'sbo', 'SalBow7G1157' => 'sbo', 'SalBow7G2123' => 'sbo', 'SalBow7G2285' => 'sbo', 'SalBow7G3537' => 'sbo', 'SalBow8G2947' => 'sbo', 'SalBow8G4463' => 'sbo', 'SalBow8G5466' => 'sbo', 'Sc01g0001750' => 'sci', 'Sc02g0006640' => 'sci', 'Sc02g0006670' => 'sci', 'Sc04g0008220' => 'sci', 'Sc05g0006190' => 'sci', 'Sc08g0002760' => 'sci', 'Sc17g0006170' => 'sci', 'Sc22g0002050' => 'sci', 'Sc23g0001190' => 'sci', 'Sc24g0000980' => 'sci', 'Sed0006245' => 'sed', 'Sed0007543' => 'sed', 'Sed0009411' => 'sed', 'Sed0010765' => 'sed', 'Sed0012944' => 'sed', 'Sed0014682' => 'sed', 'Sed0016174' => 'sed', 'Sed0016796' => 'sed', 'Sed0020317' => 'sed', 'Sed0021467' => 'sed', 'SEGI_01316' => 'sgi', 'SEGI_03374' => 'sgi', 'SEGI_16265' => 'sgi', 'SEGI_18569' => 'sgi', 'SEGI_20351' => 'sgi', 'SEGI_26395' => 'sgi', 'SEGI_29469' => 'sgi', 'SEGI_34771' => 'sgi', 'SEGI_36769' => 'sgi', 'SEGI_37139' => 'sgi', 'SGA_v2.0_scaffold100G29687' => 'sas', 'SGA_v2.0_scaffold118G32472' => 'sas', 'SGA_v2.0_scaffold14G07051' => 'sas', 'SGA_v2.0_scaffold183G39845' => 'sas', 'SGA_v2.0_scaffold1G00174' => 'sas', 'SGA_v2.0_scaffold22G09714' => 'sas', 'SGA_v2.0_scaffold333G48992' => 'sas', 'SGA_v2.0_scaffold46G17491' => 'sas', 'SGA_v2.0_scaffold49G18294' => 'sas', 'SGA_v2.0_scaffold63G21658' => 'sas', 'SHI01741' => 'shi', 'SHI05771' => 'shi', 'SHI18077' => 'shi', 'SHI20525' => 'shi', 'SHI20527' => 'shi', 'SHI20528' => 'shi', 'SMO172G0185' => 'smo', 'SMO198G0020' => 'smo', 'SMO351G0006' => 'smo', 'SMO356G0118' => 'smo', 'SMO358G0296' => 'smo', 'SMO367G0079' => 'smo', 'SMO367G1277' => 'smo', 'Solyc01g014220.3' => 'sly', 'Solyc01g111770.2' => 'sly', 'Solyc02g078180.3' => 'sly', 'Solyc03g006430.3' => 'sly', 'Solyc03g006456.1' => 'sly', 'Solyc03g079860.2' => 'sly', 'Solyc04g079770.3' => 'sly', 'Solyc05g007430.4' => 'sly', 'Solyc07g063150.3' => 'sly', 'Solyc08g016620.3' => 'sly', 'Solyc09g057590.3' => 'sly', 'Solyc09g057600.1' => 'sly', 'Solyc10g009050.3' => 'sly', 'Solyc11g017420.2' => 'sly', 'Sopen01g053810' => 'spe', 'Sopen02g023040' => 'spe', 'Sopen03g002440' => 'spe', 'Sopen04g033350' => 'spe', 'Sopen05g003310' => 'spe', 'Sopen07g004050' => 'spe', 'Sopen07g031340' => 'spe', 'Sopen08g006990' => 'spe', 'Sopen10g004830' => 'spe', 'Sopen11g009370' => 'spe', 'Sp1g24450' => 'spa', 'Sp1g29670' => 'spa', 'Sp1g39600' => 'spa', 'Sp2g11080' => 'spa', 'Sp2g13970' => 'spa', 'Sp4g16130' => 'spa', 'Sp6g13080' => 'spa', 'Sp7g37270' => 'spa', 'TAR371G0065' => 'tar', 'TAR376G0340' => 'tar', 'TAR376G0435' => 'tar', 'TAR381G0002' => 'tar', 'TAR381G1236' => 'tar', 'TAR624G0055' => 'tar', 'TAR624G0324' => 'tar', 'TAR624G0696' => 'tar', 'TAR624G0906' => 'tar', 'TAR625G0107' => 'tar', 'TAR626G0015' => 'tar', 'TAR626G1356' => 'tar', 'TAR627G0888' => 'tar', 'TAR628G0399' => 'tar', 'TAR628G1327' => 'tar', 'TAR629G2831' => 'tar', 'TAR629G2874' => 'tar', 'TAR633G1432' => 'tar', 'TAR633G2771' => 'tar', 'THA.LOC104803394' => 'tha', 'THA.LOC104805153' => 'tha', 'THA.LOC104806784' => 'tha', 'THA.LOC104810473' => 'tha', 'THA.LOC104813100' => 'tha', 'THA.LOC104814215' => 'tha', 'THA.LOC104815554' => 'tha', 'THA.LOC104820544' => 'tha', 'THA.LOC104824754' => 'tha', 'THA.LOC104827717' => 'tha', 'Thecc.02G031400' => 'tca', 'Thecc.02G055900' => 'tca', 'Thecc.02G350800' => 'tca', 'Thecc.06G150900' => 'tca', 'Thecc.06G186600' => 'tca', 'Thecc.07G089600' => 'tca', 'Thecc.08G020400' => 'tca', 'Thecc.08G182100' => 'tca', 'Thhalv10000873m.g' => 'esa', 'Thhalv10004185m.g' => 'esa', 'Thhalv10006981m.g' => 'esa', 'Thhalv10007204m.g' => 'esa', 'Thhalv10011374m.g' => 'esa', 'Thhalv10013482m.g' => 'esa', 'Thhalv10017801m.g' => 'esa', 'Thhalv10024983m.g' => 'esa', 'TPR.G12072' => 'tpr', 'TPR.G15769' => 'tpr', 'TPR.G16504' => 'tpr', 'TPR.G16506' => 'tpr', 'TPR.G24345' => 'tpr', 'TPR.G26666' => 'tpr', 'TPR.G27320' => 'tpr', 'TPR.G31819' => 'tpr', 'TPR.G38879' => 'tpr', 'TPR.G39015' => 'tpr', 'TPR.G8819' => 'tpr', 'TWI09G0924' => 'twi', 'TWI12G0811' => 'twi', 'TWI12G1294' => 'twi', 'TWI31G0150' => 'twi', 'TWI36G1262' => 'twi', 'TWI38G1287' => 'twi', 'TWI38G1633' => 'twi', 'TWI38G1982' => 'twi', 'TWI39G0116' => 'twi', 'TWI60G1011' => 'twi', 'TWI63G0171' => 'twi', 'TWI73G0839' => 'twi', 'TWI79G1511' => 'twi', 'unitig_0.g915' => 'ugi', 'unitig_0.g916' => 'ugi', 'unitig_21.g20219' => 'ugi', 'unitig_21.g20416' => 'ugi', 'unitig_578.g16132' => 'ugi', 'unitig_578.g16718' => 'ugi', 'unitig_62.g23481' => 'ugi', 'unitig_744.g24535' => 'ugi', 'unitig_749.g13525' => 'ugi', 'vmacro01248' => 'vma', 'vmacro02290' => 'vma', 'vmacro10946' => 'vma', 'vmacro11865' => 'vma', 'vmacro12493' => 'vma', 'vmacro17322' => 'vma', 'vmacro21599' => 'vma', 'vmacro23041' => 'vma', 'VMungo0251G0004' => 'vmu', 'VMungo0251G2639' => 'vmu', 'VMungo0251G2967' => 'vmu', 'VMungo0540G0864' => 'vmu', 'VMungo0540G1569' => 'vmu', 'VMungo0647G0317' => 'vmu', 'VMungo0720G1373' => 'vmu', 'VMungo0720G1508' => 'vmu', 'VMungo1080G0485' => 'vmu', 'VMungo1215G3177' => 'vmu', 'Zm00001eb112600' => 'zma', 'Zm00001eb120220' => 'zma', 'Zm00001eb153240' => 'zma', 'Zm00001eb168880' => 'zma', 'Zm00001eb213920' => 'zma', 'Zm00001eb228280' => 'zma', 'Zm00001eb254580' => 'zma', 'Zm00001eb272180' => 'zma', 'Zm00001eb293190' => 'zma', 'Zm00001eb322930' => 'zma', 'Zm00001eb353360' => 'zma', 'Zm00001eb353390' => 'zma', 'Zm00001eb353430' => 'zma', 'Zm00001eb353440' => 'zma', 'Zm00001eb353780' => 'zma' ) $gf_id = 'HOM05D000499' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000499' ) $data_identifier = 'HOM05D000499' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 29, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 12, 'amhyb' => (int) 8, 'aly' => (int) 12, 'aox' => (int) 9, 'arhy' => (int) 26, 'ath' => (int) 8, 'atr' => (int) 7, 'acertr' => (int) 10, 'cqu' => (int) 15, 'bca' => (int) 29, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 11, 'cansat' => (int) 8, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 9, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 8, 'cpa' => (int) 10, 'csa' => (int) 7, 'camsi' => (int) 20, 'dca' => (int) 8, 'din' => (int) 12, 'dzi' => (int) 14, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 6, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 38, 'gra' => (int) 16, 'vvi' => (int) 8, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 5, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 11, 'lja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 11, 'mpo' => (int) 3, 'mbi' => (int) 14, 'mdo' => (int) 14, 'mtr' => (int) 8, 'cme' => (int) 9, 'egut' => (int) 9, 'ama' => (int) 11, 'nta' => (int) 17, 'nnu' => (int) 11, 'oeu' => (int) 18, 'osa' => (int) 8, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 6, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 9, 'rsi' => (int) 9, 'sbr' => (int) 10, 'sbo' => (int) 8, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 10, 'sas' => (int) 10, 'shi' => (int) 6, 'smo' => (int) 7, 'sly' => (int) 14, 'spe' => (int) 10, 'spa' => (int) 8, 'tar' => (int) 19, 'tha' => (int) 10, 'tca' => (int) 8, 'esa' => (int) 8, 'tpr' => (int) 11, 'twi' => (int) 13, 'ugi' => (int) 9, 'vma' => (int) 8, 'vmu' => (int) 10, 'zma' => (int) 15 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb353780' $species_info = array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ) $local_species = 'egr' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000499', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1066', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p29780' => 'bna', 'A02p33180' => 'bna', 'A03p16470' => 'bna', 'A03p66010' => 'bna', 'A04p25970' => 'bna', 'A06p01270' => 'bna', 'A06p46080' => 'bna', 'A07p11400' => 'bna', 'A08p01840' => 'bna', 'A08p08230' => 'bna', 'A08p25740' => 'bna', 'A09p32070' => 'bna', 'A09p37830' => 'bna', 'A09p42840' => 'bna', 'A09p42850' => 'bna', 'Aa31LG10G2060' => 'aar', 'Aa31LG2G7410' => 'aar', 'Aa31LG6G10200' => 'aar', 'Aa31LG6G16680' => 'aar', 'Aa31LG6G8470' => 'aar', 'Aa31LG9G12730' => 'aar', 'Aa31LG9G13680' => 'aar', 'Aa31LG9G14920' => 'aar', 'Aa31LG9G6650' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4977' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5467' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3254' => 'aag', 'Actinidia02578' => 'ach', 'Actinidia07693' => 'ach', 'Actinidia08413' => 'ach', 'Actinidia08414' => 'ach', 'Actinidia15289' => 'ach', 'Actinidia19871' => 'ach', 'Actinidia21475' => 'ach', 'Actinidia22576' => 'ach', 'Actinidia28327' => 'ach', 'Actinidia32491' => 'ach', 'Actinidia39463' => 'ach', 'Actinidia39571' => 'ach', 'Ah.01g013750' => 'amhyb', 'Ah.01g023210' => 'amhyb', 'Ah.04g164850' => 'amhyb', 'Ah.05g178060' => 'amhyb', 'Ah.07g204270' => 'amhyb', 'Ah.07g208480' => 'amhyb', 'Ah.09g237410' => 'amhyb', 'Ah.14g089460' => 'amhyb', 'AL1G41790' => 'aly', 'AL1G49050' => 'aly', 'AL1G53810' => 'aly', 'AL1G61400' => 'aly', 'AL4G18580' => 'aly', 'AL5G12510' => 'aly', 'AL5G12540' => 'aly', 'AL6G43230' => 'aly', 'AL7G10370' => 'aly', 'AL7G19250' => 'aly', 'AL8G12240' => 'aly', 'AL8G18540' => 'aly', 'Aqoxy1G02409' => 'aox', 'Aqoxy2G03993' => 'aox', 'Aqoxy3G03357' => 'aox', 'Aqoxy4G00785' => 'aox', 'Aqoxy5G02598' => 'aox', 'Aqoxy6G00132' => 'aox', 'Aqoxy7G01776' => 'aox', 'Aqoxy7G02316' => 'aox', 'Aqoxy7G03973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.12AFKW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B8730' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27IQR1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3F75VG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3RE0GA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41TCQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.527VTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FIR39' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5W8UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DA38EV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ63HS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H1I32C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HC27T5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4M8AP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7N3CZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9UVDZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LS1NQA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT1D4B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SKC4TM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCFV76' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF9Q1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQWD9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1ZM88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WE07RT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YCK7VH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJE6Q6' => 'arhy', 'AT1G28240' => 'ath', 'AT1G34550' => 'ath', 'AT1G53040' => 'ath', 'AT2G02910' => 'ath', 'AT4G09630' => 'ath', 'AT4G38500' => 'ath', 'AT5G42660' => 'ath', 'AT5G46220' => 'ath', 'ATR0152G026' => 'atr', 'ATR0564G343' => 'atr', 'ATR0706G151' => 'atr', 'ATR0733G207' => 'atr', 'ATR0751G234' => 'atr', 'ATR0807G048' => 'atr', 'ATR1091G084' => 'atr', 'Atru.chr10.1229' => 'acertr', 'Atru.chr10.1230' => 'acertr', 'Atru.chr10.1874' => 'acertr', 'Atru.chr11.1808' => 'acertr', 'Atru.chr13.1795' => 'acertr', 'Atru.chr13.570' => 'acertr', 'Atru.chr2.2608' => 'acertr', 'Atru.chr2.2609' => 'acertr', 'Atru.chr5.3428' => 'acertr', 'Atru.chr8.1171' => 'acertr', 'AUR62004651' => 'cqu', 'AUR62008675' => 'cqu', 'AUR62010014' => 'cqu', 'AUR62013004' => 'cqu', 'AUR62014825' => 'cqu', 'AUR62015015' => 'cqu', 'AUR62015151' => 'cqu', 'AUR62017020' => 'cqu', 'AUR62019422' => 'cqu', 'AUR62023570' => 'cqu', 'AUR62025571' => 'cqu', 'AUR62029098' => 'cqu', 'AUR62033863' => 'cqu', 'AUR62034296' => 'cqu', 'AUR62040075' => 'cqu', 'BcaB02g07334' => 'bca', 'BcaB02g10575' => 'bca', 'BcaB03g12119' => 'bca', 'BcaB03g12120' => 'bca', 'BcaB03g13945' => 'bca', 'BcaB04g17123' => 'bca', 'BcaB04g17867' => 'bca', 'BcaB04g19839' => 'bca', 'BcaB07g30317' => 'bca', 'BcaB07g32432' => 'bca', 'BcaB07g33362' => 'bca', 'BcaB08g36611' => 'bca', 'BcaC01g00028' => 'bca', 'BcaC01g01356' => 'bca', 'BcaC01g02034' => 'bca', 'BcaC01g06051' => 'bca', 'BcaC03g16839' => 'bca', 'BcaC03g17176' => 'bca', 'BcaC05g26829' => 'bca', 'BcaC06g31490' => 'bca', 'BcaC06g35344' => 'bca', 'BcaC06g36570' => 'bca', 'BcaC07g37537' => 'bca', 'BcaC08g43491' => 'bca', 'BcaC08g43773' => 'bca', 'BcaNung00234' => 'bca', 'BcaNung01982' => 'bca', 'BcaNung03707' => 'bca', 'BcaNung06454' => 'bca', 'BolC2t10762H' => 'bol', 'BolC2t11191H' => 'bol', 'BolC3t14322H' => 'bol', 'BolC3t19747H' => 'bol', 'BolC3t21425H' => 'bol', 'BolC4t27800H' => 'bol', 'BolC5t31423H' => 'bol', 'BolC6t35951H' => 'bol', 'BolC6t36282H' => 'bol', 'BolC7t40678H' => 'bol', 'BolC7t40679H' => 'bol', 'BolC7t42222H' => 'bol', 'BolC7t43492H' => 'bol', 'BolC7t46785H' => 'bol', 'BolC8t47853H' => 'bol', 'BolC9t56805H' => 'bol', 'BraA02t08000Z' => 'bra', 'BraA02t08341Z' => 'bra', 'BraA03t10936Z' => 'bra', 'BraA03t15657Z' => 'bra', 'BraA04t18100Z' => 'bra', 'BraA05t20523Z' => 'bra', 'BraA06t23353Z' => 'bra', 'BraA06t27473Z' => 'bra', 'BraA06t27769Z' => 'bra', 'BraA07t28928Z' => 'bra', 'BraA08t32236Z' => 'bra', 'BraA08t32841Z' => 'bra', 'BraA08t34524Z' => 'bra', 'BraA09t38742Z' => 'bra', 'BraA09t39295Z' => 'bra', 'C02p47180' => 'bna', 'C02p50990' => 'bna', 'C03p19360' => 'bna', 'C03p74950' => 'bna', 'C03p91000' => 'bna', 'C04p63260' => 'bna', 'C05p27050' => 'bna', 'C06p08750' => 'bna', 'C06p11490' => 'bna', 'C07p02820' => 'bna', 'C07p17180' => 'bna', 'C07p29440' => 'bna', 'C07p63730' => 'bna', 'C09p39260' => 'bna', 'CAN.G1164.34' => 'can', 'CAN.G1164.39' => 'can', 'CAN.G1530.3' => 'can', 'CAN.G162.61' => 'can', 'CAN.G176.6' => 'can', 'CAN.G289.49' => 'can', 'CAN.G370.21' => 'can', 'CAN.G370.22' => 'can', 'CAN.G371.117' => 'can', 'CAN.G58.37' => 'can', 'CAN.G588.98' => 'can', 'CANSAT21G2266' => 'cansat', 'CANSAT25G2799' => 'cansat', 'CANSAT35G0862' => 'cansat', 'CANSAT35G1704' => 'cansat', 'CANSAT35G1760' => 'cansat', 'CANSAT56G3971' => 'cansat', 'CANSAT56G4116' => 'cansat', 'CANSAT80G1259' => 'cansat', 'CARHR027730' => 'chi', 'CARHR033880' => 'chi', 'CARHR043270' => 'chi', 'CARHR145330' => 'chi', 'CARHR145340' => 'chi', 'CARHR175570' => 'chi', 'CARHR181570' => 'chi', 'CARHR258470' => 'chi', 'CARHR260490' => 'chi', 'CARHR294220' => 'chi', 'Carub.0001s2668' => 'cru', 'Carub.0001s3257' => 'cru', 'Carub.0001s4220' => 'cru', 'Carub.0005s0179' => 'cru', 'Carub.0006s2807' => 'cru', 'Carub.0007s0039' => 'cru', 'Carub.0008s0169' => 'cru', 'Carub.0008s0636' => 'cru', 'Ca_00338_v3' => 'car', 'Ca_00542_v3' => 'car', 'Ca_01844_v3' => 'car', 'Ca_10611_v3' => 'car', 'Ca_13326_v3' => 'car', 'Ca_17944_v3' => 'car', 'Ca_18546_v3' => 'car', 'Ca_24219_v3' => 'car', 'Ca_29972_v3' => 'car', 'CBR_g3681' => 'cbr', 'CBR_g40021' => 'cbr', 'Cc01_g08140' => 'ccan', 'Cc02_g13410' => 'ccan', 'Cc02_g37480' => 'ccan', 'Cc05_g12030' => 'ccan', 'Cc09_g03370' => 'ccan', 'Cc09_g10300' => 'ccan', 'Cc10_g03530' => 'ccan', 'Cc10_g11380' => 'ccan', 'CDE01G0176' => 'cde', 'CDE02G0675' => 'cde', 'CDE02G0942' => 'cde', 'CDE02G1153' => 'cde', 'CDE02G4177' => 'cde', 'CDE04G2117' => 'cde', 'CDE04G2736' => 'cde', 'CDE08G1161' => 'cde', 'CDE09G1238' => 'cde', 'Cfa000467' => 'cfa', 'Cfa000947' => 'cfa', 'Cfa004969' => 'cfa', 'Cfa005284' => 'cfa', 'Cfa008993' => 'cfa', 'Cfa018187' => 'cfa', 'Cfa018454' => 'cfa', 'Cfa020585' => 'cfa', 'Ciclev10000424m.g' => 'ccl', 'Ciclev10003605m.g' => 'ccl', 'Ciclev10007828m.g' => 'ccl', 'Ciclev10014620m.g' => 'ccl', 'Ciclev10015169m.g' => 'ccl', 'Ciclev10018291m.g' => 'ccl', 'Ciclev10028256m.g' => 'ccl', 'Ciclev10033822m.g' => 'ccl', 'CiPaw.05G060300' => 'cil', 'CiPaw.05G085000' => 'cil', 'CiPaw.06G083700' => 'cil', 'CiPaw.06G120300' => 'cil', 'CiPaw.09G060500' => 'cil', 'CiPaw.09G123800' => 'cil', 'CiPaw.11G169700' => 'cil', 'CiPaw.12G118300' => 'cil', 'CiPaw.15G071000' => 'cil', 'CiPaw.15G081900' => 'cil', 'ClCG01G024610' => 'cla', 'ClCG03G006070' => 'cla', 'ClCG05G019250' => 'cla', 'ClCG09G009500' => 'cla', 'ClCG11G008200' => 'cla', 'ClCG11G018080' => 'cla', 'COL.COLO4_17373' => 'col', 'COL.COLO4_22994' => 'col', 'COL.COLO4_26389' => 'col', 'COL.COLO4_27170' => 'col', 'COL.COLO4_31074' => 'col', 'COL.COLO4_31465' => 'col', 'COL.COLO4_36438' => 'col', 'COL.COLO4_36439' => 'col', 'Cpa.g.c38781' => 'cpa', 'Cpa.g.sc128.12' => 'cpa', 'Cpa.g.sc166.7' => 'cpa', 'Cpa.g.sc166.8' => 'cpa', 'Cpa.g.sc20.111' => 'cpa', 'Cpa.g.sc27.31' => 'cpa', 'Cpa.g.sc64.36' => 'cpa', 'Cpa.g.sc64.37' => 'cpa', 'Cpa.g.sc66.49' => 'cpa', 'Cpa.g.sc80.64' => 'cpa', 'CsaV3_1G012320' => 'csa', 'CsaV3_2G008480' => 'csa', 'CsaV3_2G033450' => 'csa', 'CsaV3_3G044830' => 'csa', 'CsaV3_4G033710' => 'csa', 'CsaV3_6G051730' => 'csa', 'CsaV3_7G025350' => 'csa', 'CSS0001067' => 'camsi', 'CSS0005996' => 'camsi', 'CSS0006590' => 'camsi', 'CSS0009673' => 'camsi', 'CSS0010201' => 'camsi', 'CSS0010549' => 'camsi', 'CSS0011364' => 'camsi', 'CSS0014473' => 'camsi', 'CSS0014961' => 'camsi', 'CSS0020191' => 'camsi', 'CSS0021165' => 'camsi', 'CSS0022306' => 'camsi', 'CSS0030591' => 'camsi', 'CSS0030696' => 'camsi', 'CSS0032653' => 'camsi', 'CSS0037487' => 'camsi', 'CSS0041102' => 'camsi', 'CSS0041261' => 'camsi', 'CSS0046246' => 'camsi', 'CSS0049256' => 'camsi', 'DCAR_004075' => 'dca', 'DCAR_011538' => 'dca', 'DCAR_019553' => 'dca', 'DCAR_020952' => 'dca', 'DCAR_021739' => 'dca', 'DCAR_027407' => 'dca', 'DCAR_027913' => 'dca', 'DCAR_028066' => 'dca', 'Dinv05899' => 'din', 'Dinv07563' => 'din', 'Dinv08010' => 'din', 'Dinv14125' => 'din', 'Dinv20172' => 'din', 'Dinv30743' => 'din', 'Dinv31229' => 'din', 'Dinv34162' => 'din', 'Dinv36028' => 'din', 'Dinv39368' => 'din', 'Dinv40565' => 'din', 'Dinv41706' => 'din', 'Duzib052G0089' => 'dzi', 'Duzib116G0641' => 'dzi', 'Duzib132G0069' => 'dzi', 'Duzib132G1219' => 'dzi', 'Duzib147G0278' => 'dzi', 'Duzib160G0480' => 'dzi', 'Duzib170G0661' => 'dzi', 'Duzib177G0591' => 'dzi', 'Duzib187G1353' => 'dzi', 'Duzib192G0858' => 'dzi', 'Duzib192G0883' => 'dzi', 'Duzib213G0506' => 'dzi', 'Duzib235G0289' => 'dzi', 'Duzib251G0422' => 'dzi', 'ECA232G3898' => 'eca', 'ECA233G5950' => 'eca', 'ECA234G1699' => 'eca', 'ECA234G2421' => 'eca', 'ECA236G0426' => 'eca', 'ECA236G4331' => 'eca', 'ECA248G2573' => 'eca', 'EL10Ac1g00077' => 'bvu', 'EL10Ac1g01746' => 'bvu', 'EL10Ac2g03464' => 'bvu', 'EL10Ac4g08176' => 'bvu', 'EL10Ac7g17521' => 'bvu', 'EL10Ac8g20386' => 'bvu', 'EL10Ac9g21343' => 'bvu', 'EL10Ac9g22688' => 'bvu', 'Eucgr.B03434' => 'egr', 'Eucgr.D00618' => 'egr', 'Eucgr.E02395' => 'egr', 'Eucgr.F01129' => 'egr', 'Eucgr.F02622' => 'egr', 'Eucgr.F04207' => 'egr', 'FAN01G0570' => 'fan', 'FAN03G3351' => 'fan', 'FAN06G3702' => 'fan', 'FAN07G2149' => 'fan', 'FAN10G3758' => 'fan', 'FAN11G1170' => 'fan', 'FAN11G2050' => 'fan', 'FAN11G2724' => 'fan', 'FAN12G1700' => 'fan', 'FAN12G2028' => 'fan', 'FAN15G1160' => 'fan', 'FAN15G3063' => 'fan', 'FAN16G2540' => 'fan', 'FAN16G3077' => 'fan', 'FAN16G3624' => 'fan', 'FAN17G0221' => 'fan', 'FAN20G2492' => 'fan', 'FAN20G2905' => 'fan', 'FAN21G0548' => 'fan', 'FAN21G1300' => 'fan', 'FAN22G0077' => 'fan', 'FAN22G1315' => 'fan', 'FAN24G1280' => 'fan', 'FAN24G1445' => 'fan', 'FAN24G3527' => 'fan', 'FAN25G0464' => 'fan', 'FAN25G2885' => 'fan', 'FAN25G3270' => 'fan', 'FAN27G1101' => 'fan', 'FAN27G2846' => 'fan', 'FAN27G3524' => 'fan', 'FvH4_2g11770' => 'fve', 'FvH4_2g15630' => 'fve', 'FvH4_3g05570' => 'fve', 'FvH4_3g09110' => 'fve', 'FvH4_3g19940' => 'fve', 'FvH4_4g04821' => 'fve', 'FvH4_4g31480' => 'fve', 'FvH4_7g01740' => 'fve', 'Glyma.05G130400' => 'gma', 'Glyma.05G156400' => 'gma', 'Glyma.07G197000' => 'gma', 'Glyma.08G085151' => 'gma', 'Glyma.08G114500' => 'gma', 'Glyma.08G300400' => 'gma', 'Glyma.10G215800' => 'gma', 'Glyma.12G224400' => 'gma', 'Glyma.13G179300' => 'gma', 'Glyma.13G218151' => 'gma', 'Glyma.13G238800' => 'gma', 'Glyma.13G276900' => 'gma', 'Glyma.14G078200' => 'gma', 'Glyma.15G074500' => 'gma', 'Glyma.15G094100' => 'gma', 'Glyma.17G247200' => 'gma', 'Glyma.18G120100' => 'gma', 'Glyma.20G176000' => 'gma', 'Gohir.A01G063600' => 'ghi', 'Gohir.A01G170301' => 'ghi', 'Gohir.A02G060500' => 'ghi', 'Gohir.A05G133850' => 'ghi', 'Gohir.A05G161400' => 'ghi', 'Gohir.A06G012900' => 'ghi', 'Gohir.A06G035901' => 'ghi', 'Gohir.A06G127100' => 'ghi', 'Gohir.A06G210500' => 'ghi', 'Gohir.A08G008650' => 'ghi', 'Gohir.A09G072700' => 'ghi', 'Gohir.A09G088301' => 'ghi', 'Gohir.A10G040600' => 'ghi', 'Gohir.A12G036300' => 'ghi', 'Gohir.A12G143350' => 'ghi', 'Gohir.A12G165500' => 'ghi', 'Gohir.A13G145700' => 'ghi', 'Gohir.D01G050000' => 'ghi', 'Gohir.D01G051366' => 'ghi', 'Gohir.D01G161350' => 'ghi', 'Gohir.D02G065900' => 'ghi', 'Gohir.D05G164200' => 'ghi', 'Gohir.D05G355500' => 'ghi', 'Gohir.D06G010400' => 'ghi', 'Gohir.D06G111250' => 'ghi', 'Gohir.D06G132000' => 'ghi', 'Gohir.D06G210500' => 'ghi', 'Gohir.D07G165675' => 'ghi', 'Gohir.D08G062240' => 'ghi', 'Gohir.D08G086101' => 'ghi', 'Gohir.D08G138060' => 'ghi', 'Gohir.D09G072300' => 'ghi', 'Gohir.D10G041400' => 'ghi', 'Gohir.D11G191020' => 'ghi', 'Gohir.D11G212066' => 'ghi', 'Gohir.D12G036300' => 'ghi', 'Gohir.D12G168600' => 'ghi', 'Gohir.D13G150600' => 'ghi', 'Gorai.001G057300' => 'gra', 'Gorai.002G069900' => 'gra', 'Gorai.002G200000' => 'gra', 'Gorai.003G067600' => 'gra', 'Gorai.005G074800' => 'gra', 'Gorai.006G087300' => 'gra', 'Gorai.008G037500' => 'gra', 'Gorai.008G181400' => 'gra', 'Gorai.009G169400' => 'gra', 'Gorai.009G387900' => 'gra', 'Gorai.010G013300' => 'gra', 'Gorai.010G153800' => 'gra', 'Gorai.010G255800' => 'gra', 'Gorai.011G043700' => 'gra', 'Gorai.011G198900' => 'gra', 'Gorai.013G168400' => 'gra', 'GSVIVG01005212001' => 'vvi', 'GSVIVG01006163001' => 'vvi', 'GSVIVG01009625001' => 'vvi', 'GSVIVG01014338001' => 'vvi', 'GSVIVG01020005001' => 'vvi', 'GSVIVG01021450001' => 'vvi', 'GSVIVG01023975001' => 'vvi', 'GSVIVG01034490001' => 'vvi', 'HanXRQChr04g0112071' => 'han', 'HanXRQChr05g0131151' => 'han', 'HanXRQChr09g0262371' => 'han', 'HanXRQChr09g0268401' => 'han', 'HanXRQChr10g0279241' => 'han', 'HanXRQChr10g0297961' => 'han', 'HanXRQChr11g0326231' => 'han', 'HanXRQChr11g0328471' => 'han', 'HanXRQChr16g0507941' => 'han', 'HanXRQChr17g0560211' => 'han', 'Haze_02108' => 'cav', 'Haze_02428' => 'cav', 'Haze_05593' => 'cav', 'Haze_06448' => 'cav', 'Haze_09427' => 'cav', 'Haze_12022' => 'cav', 'Haze_17612' => 'cav', 'Haze_17928' => 'cav', 'Hma1.2p1_0032F.1_g019250' => 'hma', 'Hma1.2p1_0163F.1_g072690' => 'hma', 'Hma1.2p1_0265F.1_g106710' => 'hma', 'Hma1.2p1_0286F.1_g113970' => 'hma', 'Hma1.2p1_0363F.1_g136640' => 'hma', 'Hma1.2p1_0584F.1_g183470' => 'hma', 'Hma1.2p1_0885F.1_g232570' => 'hma', 'HPP92_006022' => 'vpl', 'HPP92_007320' => 'vpl', 'HPP92_011521' => 'vpl', 'HPP92_019387' => 'vpl', 'HPP92_024038' => 'vpl', 'Hund05891' => 'sun', 'Hund06450' => 'sun', 'Hund12053' => 'sun', 'Hund16800' => 'sun', 'Hund21222' => 'sun', 'Hund22896' => 'sun', 'Hund23746' => 'sun', 'Hund27083' => 'sun', 'Lalb_Chr02g0141831' => 'lal', 'Lalb_Chr02g0141841' => 'lal', 'Lalb_Chr05g0220411' => 'lal', 'Lalb_Chr06g0162081' => 'lal', 'Lalb_Chr09g0327651' => 'lal', 'Lalb_Chr13g0295051' => 'lal', 'Lalb_Chr15g0086801' => 'lal', 'Lalb_Chr16g0383781' => 'lal', 'Lalb_Chr16g0383791' => 'lal', 'Lalb_Chr18g0055441' => 'lal', 'Lalb_Chr18g0059611' => 'lal', 'Lalb_Chr20g0109661' => 'lal', 'Lalb_Chr20g0109831' => 'lal', 'Lalb_Chr20g0121871' => 'lal', 'Lalb_Chr22g0355361' => 'lal', 'Lalb_Chr25g0286371' => 'lal', 'Lj1A1187G43' => 'lonja', 'Lj1A1205T50' => 'lonja', 'Lj1A800G33' => 'lonja', 'Lj1C1187T7' => 'lonja', 'Lj1C843T11' => 'lonja', 'Lj1g0010940' => 'lja', 'Lj2A288T69' => 'lonja', 'Lj3g0024276' => 'lja', 'Lj4A47T76' => 'lonja', 'Lj4g0005805' => 'lja', 'Lj4g0006097' => 'lja', 'Lj4g0008528' => 'lja', 'Lj4g0024907' => 'lja', 'Lj5g0012472' => 'lja', 'Lj5g0018648' => 'lja', 'Lj6C789G1' => 'lonja', 'Lj6g0004000' => 'lja', 'Lj7A292G67' => 'lonja', 'Lj7A292T64' => 'lonja', 'Lj9A400T58' => 'lonja', 'Lsat_1_v5_gn_1_126181' => 'lsa', 'Lsat_1_v5_gn_4_123041' => 'lsa', 'Lsat_1_v5_gn_4_133620' => 'lsa', 'Lsat_1_v5_gn_4_53221' => 'lsa', 'Lsat_1_v5_gn_4_71961' => 'lsa', 'Lsat_1_v5_gn_7_105241' => 'lsa', 'Lsat_1_v5_gn_7_21361' => 'lsa', 'Lsat_1_v5_gn_7_28860' => 'lsa', 'Lsat_1_v5_gn_7_31260' => 'lsa', 'Lsat_1_v5_gn_8_52801' => 'lsa', 'Manes.02G191400' => 'mes', 'Manes.03G110100' => 'mes', 'Manes.04G071100' => 'mes', 'Manes.05G100500' => 'mes', 'Manes.05G164700' => 'mes', 'Manes.15G087000' => 'mes', 'Manes.15G121500' => 'mes', 'Manes.16G028300' => 'mes', 'Manes.17G046100' => 'mes', 'Manes.17G069800' => 'mes', 'Manes.18G100500' => 'mes', 'Mapoly0002s0109' => 'mpo', 'Mapoly0024s0007' => 'mpo', 'Mapoly0089s0032' => 'mpo', 'MBI04_g42241_MAGBIO' => 'mbi', 'MBI05_g11988_MAGBIO' => 'mbi', 'MBI05_g35452_MAGBIO' => 'mbi', 'MBI07_g30179_MAGBIO' => 'mbi', 'MBI07_g35859_MAGBIO' => 'mbi', 'MBI07_g35860_MAGBIO' => 'mbi', 'MBI07_g37166_MAGBIO' => 'mbi', 'MBI08_g18172_MAGBIO' => 'mbi', 'MBI09_g08441_MAGBIO' => 'mbi', 'MBI13_g01676_MAGBIO' => 'mbi', 'MBI14_g42955_MAGBIO' => 'mbi', 'MBI16_g13161_MAGBIO' => 'mbi', 'MBI17_g27204_MAGBIO' => 'mbi', 'MBI19_g21595_MAGBIO' => 'mbi', 'MD00G1148400' => 'mdo', 'MD02G1301200' => 'mdo', 'MD03G1227800' => 'mdo', 'MD05G1041100' => 'mdo', 'MD05G1124800' => 'mdo', 'MD05G1284000' => 'mdo', 'MD05G1338800' => 'mdo', 'MD05G1338900' => 'mdo', 'MD07G1022800' => 'mdo', 'MD10G1047500' => 'mdo', 'MD10G1127500' => 'mdo', 'MD10G1262300' => 'mdo', 'MD10G1293800' => 'mdo', 'MD16G1074300' => 'mdo', 'Medtr1g021670' => 'mtr', 'Medtr1g096320' => 'mtr', 'Medtr2g013690' => 'mtr', 'Medtr2g019450' => 'mtr', 'Medtr2g085170' => 'mtr', 'Medtr4g088785' => 'mtr', 'Medtr8g055930' => 'mtr', 'Medtr8g085850' => 'mtr', 'MELO3C002605.2' => 'cme', 'MELO3C003891.2' => 'cme', 'MELO3C004012.2' => 'cme', 'MELO3C007134.2' => 'cme', 'MELO3C008118.2' => 'cme', 'MELO3C016700.2' => 'cme', 'MELO3C024127.2' => 'cme', 'MELO3C033361.2' => 'cme', 'MELO3C033362.2' => 'cme', 'Migut.C00430' => 'egut', 'Migut.C01246' => 'egut', 'Migut.E00101' => 'egut', 'Migut.H01486' => 'egut', 'Migut.H01939' => 'egut', 'Migut.K00360' => 'egut', 'Migut.M00910' => 'egut', 'Migut.M01139' => 'egut', 'Migut.N02677' => 'egut', 'MSTRG.13252' => 'ama', 'MSTRG.14701' => 'ama', 'MSTRG.1521' => 'ama', 'MSTRG.15884' => 'ama', 'MSTRG.16242' => 'ama', 'MSTRG.22285' => 'ama', 'MSTRG.22444' => 'ama', 'MSTRG.2349' => 'ama', 'MSTRG.26308' => 'ama', 'MSTRG.28296' => 'ama', 'MSTRG.9895' => 'ama', 'Nitab4.5_0000110g0060' => 'nta', 'Nitab4.5_0000420g0130' => 'nta', 'Nitab4.5_0000422g0030' => 'nta', 'Nitab4.5_0000560g0180' => 'nta', 'Nitab4.5_0000703g0100' => 'nta', 'Nitab4.5_0000786g0200' => 'nta', 'Nitab4.5_0001336g0020' => 'nta', 'Nitab4.5_0001796g0030' => 'nta', 'Nitab4.5_0003348g0060' => 'nta', 'Nitab4.5_0003698g0040' => 'nta', 'Nitab4.5_0003942g0090' => 'nta', 'Nitab4.5_0004775g0070' => 'nta', 'Nitab4.5_0004864g0030' => 'nta', 'Nitab4.5_0005615g0020' => 'nta', 'Nitab4.5_0009288g0030' => 'nta', 'Nitab4.5_0009341g0010' => 'nta', 'Nitab4.5_0009535g0010' => 'nta', 'Nn1g03995' => 'nnu', 'Nn1g04100' => 'nnu', 'Nn1g06530' => 'nnu', 'Nn3g16404' => 'nnu', 'Nn3g17212' => 'nnu', 'Nn3g20776' => 'nnu', 'Nn3g21923' => 'nnu', 'Nn5g27737' => 'nnu', 'Nn5g29461' => 'nnu', 'Nn7g38355' => 'nnu', 'Nn8g39873' => 'nnu', 'Oeu000548.2' => 'oeu', 'Oeu004672.1' => 'oeu', 'Oeu015605.2' => 'oeu', 'Oeu016092.1' => 'oeu', 'Oeu017879.3' => 'oeu', 'Oeu024910.1' => 'oeu', 'Oeu028965.1' => 'oeu', 'Oeu031269.1' => 'oeu', 'Oeu031270.1' => 'oeu', 'Oeu032535.1' => 'oeu', 'Oeu034151.1' => 'oeu', 'Oeu034152.1' => 'oeu', 'Oeu034588.2' => 'oeu', 'Oeu050846.1' => 'oeu', 'Oeu050849.2' => 'oeu', 'Oeu051063.2' => 'oeu', 'Oeu052368.1' => 'oeu', 'Oeu052370.1' => 'oeu', 'Os01g0210400' => 'osa', 'Os01g0304300' => 'osa', 'Os01g0749100' => 'osa', 'Os02g0745800' => 'osa', 'Os03g0769050' => 'osa', 'Os05g0531500' => 'osa', 'Os06g0724300' => 'osa', 'Os11g0198100' => 'osa', 'Peaxi162Scf00069g01425' => 'pax', 'Peaxi162Scf00280g00811' => 'pax', 'Peaxi162Scf00310g00615' => 'pax', 'Peaxi162Scf00362g00542' => 'pax', 'Peaxi162Scf00461g00310' => 'pax', 'Peaxi162Scf00530g00118' => 'pax', 'Peaxi162Scf00541g00057' => 'pax', 'Peaxi162Scf00661g00017' => 'pax', 'Peaxi162Scf00926g00027' => 'pax', 'Peaxi162Scf01064g00263' => 'pax', 'Peaxi162Scf01211g00135' => 'pax', 'PGR004G2336' => 'pgr', 'PGR042G0327' => 'pgr', 'PGR042G1957' => 'pgr', 'PGR042G2003' => 'pgr', 'PGR042G3929' => 'pgr', 'PGR083G1137' => 'pgr', 'PGR083G1364' => 'pgr', 'PGSC0003DMG400003381' => 'stu', 'PGSC0003DMG400003417' => 'stu', 'PGSC0003DMG400008981' => 'stu', 'PGSC0003DMG400012417' => 'stu', 'PGSC0003DMG400012823' => 'stu', 'PGSC0003DMG400016885' => 'stu', 'PGSC0003DMG400022812' => 'stu', 'PGSC0003DMG400029726' => 'stu', 'PGSC0003DMG401009243' => 'stu', 'PGSC0003DMG401031505' => 'stu', 'PGSC0003DMG402031505' => 'stu', 'Phvul.001G017600' => 'pvu', 'Phvul.002G193500' => 'pvu', 'Phvul.002G228900' => 'pvu', 'Phvul.002G236800' => 'pvu', 'Phvul.003G049500' => 'pvu', 'Phvul.005G072000' => 'pvu', 'Phvul.006G164800' => 'pvu', 'Phvul.006G185100' => 'pvu', 'Phvul.007G090000' => 'pvu', 'Potri.001G399800' => 'ptr', 'Potri.002G149900' => 'ptr', 'Potri.004G044100' => 'ptr', 'Potri.004G177600' => 'ptr', 'Potri.009G138000' => 'ptr', 'Potri.010G094000' => 'ptr', 'Potri.011G053000' => 'ptr', 'Potri.011G119300' => 'ptr', 'Potri.013G113700' => 'ptr', 'Potri.018G107800' => 'ptr', 'Potri.019G084100' => 'ptr', 'Pp3c14_23720' => 'ppa', 'Pp3c16_6340' => 'ppa', 'Pp3c23_13420' => 'ppa', 'Pp3c24_2740' => 'ppa', 'Pp3c25_860' => 'ppa', 'Pp3c8_21750' => 'ppa', 'Prupe.1G273000' => 'ppe', 'Prupe.1G273700' => 'ppe', 'Prupe.1G274100' => 'ppe', 'Prupe.2G023300' => 'ppe', 'Prupe.4G048000' => 'ppe', 'Prupe.4G080400' => 'ppe', 'Prupe.4G181200' => 'ppe', 'Prupe.8G056900' => 'ppe', 'Prupe.8G168700' => 'ppe', 'Psat1g189080' => 'psa', 'Psat1g204760' => 'psa', 'Psat4g175560' => 'psa', 'Psat4g177720' => 'psa', 'Psat5g244240' => 'psa', 'Psat6g010720' => 'psa', 'Psat6g187200' => 'psa', 'Psat7g072040' => 'psa', 'PSO017G3501' => 'pso', 'PSO063G2148' => 'pso', 'PSO063G5608' => 'pso', 'PSO210G6392' => 'pso', 'PSO541G2319' => 'pso', 'PSO541G2836' => 'pso', 'PSO541G4012' => 'pso', 'PSO541G6253' => 'pso', 'PSO675G0580' => 'pso', 'PSO675G0856' => 'pso', 'PSO675G5635' => 'pso', 'PSO675G9157' => 'pso', 'PSO832G1660' => 'pso', 'PSO832G1969' => 'pso', 'QL02p007186' => 'qlo', 'QL02p033904' => 'qlo', 'QL03p064391' => 'qlo', 'QL05p040593' => 'qlo', 'QL05p058242' => 'qlo', 'QL08p021825' => 'qlo', 'QL11p004981' => 'qlo', 'RcHm_v2.0_Chr1g0318301' => 'rch', 'RcHm_v2.0_Chr4g0418501' => 'rch', 'RcHm_v2.0_Chr4g0439971' => 'rch', 'RcHm_v2.0_Chr5g0008541' => 'rch', 'RcHm_v2.0_Chr5g0014101' => 'rch', 'RcHm_v2.0_Chr5g0014131' => 'rch', 'RcHm_v2.0_Chr5g0033621' => 'rch', 'RcHm_v2.0_Chr6g0272041' => 'rch', 'RcHm_v2.0_Chr6g0278831' => 'rch', 'Rhsim02G0130400' => 'rsi', 'Rhsim02G0171100' => 'rsi', 'Rhsim05G0053000' => 'rsi', 'Rhsim05G0053100' => 'rsi', 'Rhsim06G0096500' => 'rsi', 'Rhsim06G0096600' => 'rsi', 'Rhsim06G0199100' => 'rsi', 'Rhsim12G0062300' => 'rsi', 'Rhsim12G0062800' => 'rsi', 'Sabra02G0118600' => 'sbr', 'Sabra04G0027300' => 'sbr', 'Sabra04G0119500' => 'sbr', 'Sabra08G0112500' => 'sbr', 'Sabra11G0036800' => 'sbr', 'Sabra11G0103800' => 'sbr', 'Sabra13G0096300' => 'sbr', 'Sabra16G0262300' => 'sbr', 'Sabra18G0091700' => 'sbr', 'Sabra19G0095400' => 'sbr', 'SalBow6G3080' => 'sbo', 'SalBow7G1157' => 'sbo', 'SalBow7G2123' => 'sbo', 'SalBow7G2285' => 'sbo', 'SalBow7G3537' => 'sbo', 'SalBow8G2947' => 'sbo', 'SalBow8G4463' => 'sbo', 'SalBow8G5466' => 'sbo', 'Sc01g0001750' => 'sci', 'Sc02g0006640' => 'sci', 'Sc02g0006670' => 'sci', 'Sc04g0008220' => 'sci', 'Sc05g0006190' => 'sci', 'Sc08g0002760' => 'sci', 'Sc17g0006170' => 'sci', 'Sc22g0002050' => 'sci', 'Sc23g0001190' => 'sci', 'Sc24g0000980' => 'sci', 'Sed0006245' => 'sed', 'Sed0007543' => 'sed', 'Sed0009411' => 'sed', 'Sed0010765' => 'sed', 'Sed0012944' => 'sed', 'Sed0014682' => 'sed', 'Sed0016174' => 'sed', 'Sed0016796' => 'sed', 'Sed0020317' => 'sed', 'Sed0021467' => 'sed', 'SEGI_01316' => 'sgi', 'SEGI_03374' => 'sgi', 'SEGI_16265' => 'sgi', 'SEGI_18569' => 'sgi', 'SEGI_20351' => 'sgi', 'SEGI_26395' => 'sgi', 'SEGI_29469' => 'sgi', 'SEGI_34771' => 'sgi', 'SEGI_36769' => 'sgi', 'SEGI_37139' => 'sgi', 'SGA_v2.0_scaffold100G29687' => 'sas', 'SGA_v2.0_scaffold118G32472' => 'sas', 'SGA_v2.0_scaffold14G07051' => 'sas', 'SGA_v2.0_scaffold183G39845' => 'sas', 'SGA_v2.0_scaffold1G00174' => 'sas', 'SGA_v2.0_scaffold22G09714' => 'sas', 'SGA_v2.0_scaffold333G48992' => 'sas', 'SGA_v2.0_scaffold46G17491' => 'sas', 'SGA_v2.0_scaffold49G18294' => 'sas', 'SGA_v2.0_scaffold63G21658' => 'sas', 'SHI01741' => 'shi', 'SHI05771' => 'shi', 'SHI18077' => 'shi', 'SHI20525' => 'shi', 'SHI20527' => 'shi', 'SHI20528' => 'shi', 'SMO172G0185' => 'smo', 'SMO198G0020' => 'smo', 'SMO351G0006' => 'smo', 'SMO356G0118' => 'smo', 'SMO358G0296' => 'smo', 'SMO367G0079' => 'smo', 'SMO367G1277' => 'smo', 'Solyc01g014220.3' => 'sly', 'Solyc01g111770.2' => 'sly', 'Solyc02g078180.3' => 'sly', 'Solyc03g006430.3' => 'sly', 'Solyc03g006456.1' => 'sly', 'Solyc03g079860.2' => 'sly', 'Solyc04g079770.3' => 'sly', 'Solyc05g007430.4' => 'sly', 'Solyc07g063150.3' => 'sly', 'Solyc08g016620.3' => 'sly', 'Solyc09g057590.3' => 'sly', 'Solyc09g057600.1' => 'sly', 'Solyc10g009050.3' => 'sly', 'Solyc11g017420.2' => 'sly', 'Sopen01g053810' => 'spe', 'Sopen02g023040' => 'spe', 'Sopen03g002440' => 'spe', 'Sopen04g033350' => 'spe', 'Sopen05g003310' => 'spe', 'Sopen07g004050' => 'spe', 'Sopen07g031340' => 'spe', 'Sopen08g006990' => 'spe', 'Sopen10g004830' => 'spe', 'Sopen11g009370' => 'spe', 'Sp1g24450' => 'spa', 'Sp1g29670' => 'spa', 'Sp1g39600' => 'spa', 'Sp2g11080' => 'spa', 'Sp2g13970' => 'spa', 'Sp4g16130' => 'spa', 'Sp6g13080' => 'spa', 'Sp7g37270' => 'spa', 'TAR371G0065' => 'tar', 'TAR376G0340' => 'tar', 'TAR376G0435' => 'tar', 'TAR381G0002' => 'tar', 'TAR381G1236' => 'tar', 'TAR624G0055' => 'tar', 'TAR624G0324' => 'tar', 'TAR624G0696' => 'tar', 'TAR624G0906' => 'tar', 'TAR625G0107' => 'tar', 'TAR626G0015' => 'tar', 'TAR626G1356' => 'tar', 'TAR627G0888' => 'tar', 'TAR628G0399' => 'tar', 'TAR628G1327' => 'tar', 'TAR629G2831' => 'tar', 'TAR629G2874' => 'tar', 'TAR633G1432' => 'tar', 'TAR633G2771' => 'tar', 'THA.LOC104803394' => 'tha', 'THA.LOC104805153' => 'tha', 'THA.LOC104806784' => 'tha', 'THA.LOC104810473' => 'tha', 'THA.LOC104813100' => 'tha', 'THA.LOC104814215' => 'tha', 'THA.LOC104815554' => 'tha', 'THA.LOC104820544' => 'tha', 'THA.LOC104824754' => 'tha', 'THA.LOC104827717' => 'tha', 'Thecc.02G031400' => 'tca', 'Thecc.02G055900' => 'tca', 'Thecc.02G350800' => 'tca', 'Thecc.06G150900' => 'tca', 'Thecc.06G186600' => 'tca', 'Thecc.07G089600' => 'tca', 'Thecc.08G020400' => 'tca', 'Thecc.08G182100' => 'tca', 'Thhalv10000873m.g' => 'esa', 'Thhalv10004185m.g' => 'esa', 'Thhalv10006981m.g' => 'esa', 'Thhalv10007204m.g' => 'esa', 'Thhalv10011374m.g' => 'esa', 'Thhalv10013482m.g' => 'esa', 'Thhalv10017801m.g' => 'esa', 'Thhalv10024983m.g' => 'esa', 'TPR.G12072' => 'tpr', 'TPR.G15769' => 'tpr', 'TPR.G16504' => 'tpr', 'TPR.G16506' => 'tpr', 'TPR.G24345' => 'tpr', 'TPR.G26666' => 'tpr', 'TPR.G27320' => 'tpr', 'TPR.G31819' => 'tpr', 'TPR.G38879' => 'tpr', 'TPR.G39015' => 'tpr', 'TPR.G8819' => 'tpr', 'TWI09G0924' => 'twi', 'TWI12G0811' => 'twi', 'TWI12G1294' => 'twi', 'TWI31G0150' => 'twi', 'TWI36G1262' => 'twi', 'TWI38G1287' => 'twi', 'TWI38G1633' => 'twi', 'TWI38G1982' => 'twi', 'TWI39G0116' => 'twi', 'TWI60G1011' => 'twi', 'TWI63G0171' => 'twi', 'TWI73G0839' => 'twi', 'TWI79G1511' => 'twi', 'unitig_0.g915' => 'ugi', 'unitig_0.g916' => 'ugi', 'unitig_21.g20219' => 'ugi', 'unitig_21.g20416' => 'ugi', 'unitig_578.g16132' => 'ugi', 'unitig_578.g16718' => 'ugi', 'unitig_62.g23481' => 'ugi', 'unitig_744.g24535' => 'ugi', 'unitig_749.g13525' => 'ugi', 'vmacro01248' => 'vma', 'vmacro02290' => 'vma', 'vmacro10946' => 'vma', 'vmacro11865' => 'vma', 'vmacro12493' => 'vma', 'vmacro17322' => 'vma', 'vmacro21599' => 'vma', 'vmacro23041' => 'vma', 'VMungo0251G0004' => 'vmu', 'VMungo0251G2639' => 'vmu', 'VMungo0251G2967' => 'vmu', 'VMungo0540G0864' => 'vmu', 'VMungo0540G1569' => 'vmu', 'VMungo0647G0317' => 'vmu', 'VMungo0720G1373' => 'vmu', 'VMungo0720G1508' => 'vmu', 'VMungo1080G0485' => 'vmu', 'VMungo1215G3177' => 'vmu', 'Zm00001eb112600' => 'zma', 'Zm00001eb120220' => 'zma', 'Zm00001eb153240' => 'zma', 'Zm00001eb168880' => 'zma', 'Zm00001eb213920' => 'zma', 'Zm00001eb228280' => 'zma', 'Zm00001eb254580' => 'zma', 'Zm00001eb272180' => 'zma', 'Zm00001eb293190' => 'zma', 'Zm00001eb322930' => 'zma', 'Zm00001eb353360' => 'zma', 'Zm00001eb353390' => 'zma', 'Zm00001eb353430' => 'zma', 'Zm00001eb353440' => 'zma', 'Zm00001eb353780' => 'zma' ), 'gf_id' => 'HOM05D000499', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000499' ), 'data_identifier' => 'HOM05D000499', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000499', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1066', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p29780' => 'bna', 'A02p33180' => 'bna', 'A03p16470' => 'bna', 'A03p66010' => 'bna', 'A04p25970' => 'bna', 'A06p01270' => 'bna', 'A06p46080' => 'bna', 'A07p11400' => 'bna', 'A08p01840' => 'bna', 'A08p08230' => 'bna', 'A08p25740' => 'bna', 'A09p32070' => 'bna', 'A09p37830' => 'bna', 'A09p42840' => 'bna', 'A09p42850' => 'bna', 'Aa31LG10G2060' => 'aar', 'Aa31LG2G7410' => 'aar', 'Aa31LG6G10200' => 'aar', 'Aa31LG6G16680' => 'aar', 'Aa31LG6G8470' => 'aar', 'Aa31LG9G12730' => 'aar', 'Aa31LG9G13680' => 'aar', 'Aa31LG9G14920' => 'aar', 'Aa31LG9G6650' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4977' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5467' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3254' => 'aag', 'Actinidia02578' => 'ach', 'Actinidia07693' => 'ach', 'Actinidia08413' => 'ach', 'Actinidia08414' => 'ach', 'Actinidia15289' => 'ach', 'Actinidia19871' => 'ach', 'Actinidia21475' => 'ach', 'Actinidia22576' => 'ach', 'Actinidia28327' => 'ach', 'Actinidia32491' => 'ach', 'Actinidia39463' => 'ach', 'Actinidia39571' => 'ach', 'Ah.01g013750' => 'amhyb', 'Ah.01g023210' => 'amhyb', 'Ah.04g164850' => 'amhyb', 'Ah.05g178060' => 'amhyb', 'Ah.07g204270' => 'amhyb', 'Ah.07g208480' => 'amhyb', 'Ah.09g237410' => 'amhyb', 'Ah.14g089460' => 'amhyb', 'AL1G41790' => 'aly', 'AL1G49050' => 'aly', 'AL1G53810' => 'aly', 'AL1G61400' => 'aly', 'AL4G18580' => 'aly', 'AL5G12510' => 'aly', 'AL5G12540' => 'aly', 'AL6G43230' => 'aly', 'AL7G10370' => 'aly', 'AL7G19250' => 'aly', 'AL8G12240' => 'aly', 'AL8G18540' => 'aly', 'Aqoxy1G02409' => 'aox', 'Aqoxy2G03993' => 'aox', 'Aqoxy3G03357' => 'aox', 'Aqoxy4G00785' => 'aox', 'Aqoxy5G02598' => 'aox', 'Aqoxy6G00132' => 'aox', 'Aqoxy7G01776' => 'aox', 'Aqoxy7G02316' => 'aox', 'Aqoxy7G03973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.12AFKW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B8730' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27IQR1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3F75VG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3RE0GA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41TCQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.527VTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FIR39' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5W8UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DA38EV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ63HS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H1I32C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HC27T5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4M8AP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7N3CZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9UVDZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LS1NQA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT1D4B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SKC4TM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCFV76' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF9Q1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQWD9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1ZM88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WE07RT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YCK7VH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJE6Q6' => 'arhy', 'AT1G28240' => 'ath', 'AT1G34550' => 'ath', 'AT1G53040' => 'ath', 'AT2G02910' => 'ath', 'AT4G09630' => 'ath', 'AT4G38500' => 'ath', 'AT5G42660' => 'ath', 'AT5G46220' => 'ath', 'ATR0152G026' => 'atr', 'ATR0564G343' => 'atr', 'ATR0706G151' => 'atr', 'ATR0733G207' => 'atr', 'ATR0751G234' => 'atr', 'ATR0807G048' => 'atr', 'ATR1091G084' => 'atr', 'Atru.chr10.1229' => 'acertr', 'Atru.chr10.1230' => 'acertr', 'Atru.chr10.1874' => 'acertr', 'Atru.chr11.1808' => 'acertr', 'Atru.chr13.1795' => 'acertr', 'Atru.chr13.570' => 'acertr', 'Atru.chr2.2608' => 'acertr', 'Atru.chr2.2609' => 'acertr', 'Atru.chr5.3428' => 'acertr', 'Atru.chr8.1171' => 'acertr', 'AUR62004651' => 'cqu', 'AUR62008675' => 'cqu', 'AUR62010014' => 'cqu', 'AUR62013004' => 'cqu', 'AUR62014825' => 'cqu', 'AUR62015015' => 'cqu', 'AUR62015151' => 'cqu', 'AUR62017020' => 'cqu', 'AUR62019422' => 'cqu', 'AUR62023570' => 'cqu', 'AUR62025571' => 'cqu', 'AUR62029098' => 'cqu', 'AUR62033863' => 'cqu', 'AUR62034296' => 'cqu', 'AUR62040075' => 'cqu', 'BcaB02g07334' => 'bca', 'BcaB02g10575' => 'bca', 'BcaB03g12119' => 'bca', 'BcaB03g12120' => 'bca', 'BcaB03g13945' => 'bca', 'BcaB04g17123' => 'bca', 'BcaB04g17867' => 'bca', 'BcaB04g19839' => 'bca', 'BcaB07g30317' => 'bca', 'BcaB07g32432' => 'bca', 'BcaB07g33362' => 'bca', 'BcaB08g36611' => 'bca', 'BcaC01g00028' => 'bca', 'BcaC01g01356' => 'bca', 'BcaC01g02034' => 'bca', 'BcaC01g06051' => 'bca', 'BcaC03g16839' => 'bca', 'BcaC03g17176' => 'bca', 'BcaC05g26829' => 'bca', 'BcaC06g31490' => 'bca', 'BcaC06g35344' => 'bca', 'BcaC06g36570' => 'bca', 'BcaC07g37537' => 'bca', 'BcaC08g43491' => 'bca', 'BcaC08g43773' => 'bca', 'BcaNung00234' => 'bca', 'BcaNung01982' => 'bca', 'BcaNung03707' => 'bca', 'BcaNung06454' => 'bca', 'BolC2t10762H' => 'bol', 'BolC2t11191H' => 'bol', 'BolC3t14322H' => 'bol', 'BolC3t19747H' => 'bol', 'BolC3t21425H' => 'bol', 'BolC4t27800H' => 'bol', 'BolC5t31423H' => 'bol', 'BolC6t35951H' => 'bol', 'BolC6t36282H' => 'bol', 'BolC7t40678H' => 'bol', 'BolC7t40679H' => 'bol', 'BolC7t42222H' => 'bol', 'BolC7t43492H' => 'bol', 'BolC7t46785H' => 'bol', 'BolC8t47853H' => 'bol', 'BolC9t56805H' => 'bol', 'BraA02t08000Z' => 'bra', 'BraA02t08341Z' => 'bra', 'BraA03t10936Z' => 'bra', 'BraA03t15657Z' => 'bra', 'BraA04t18100Z' => 'bra', 'BraA05t20523Z' => 'bra', 'BraA06t23353Z' => 'bra', 'BraA06t27473Z' => 'bra', 'BraA06t27769Z' => 'bra', 'BraA07t28928Z' => 'bra', 'BraA08t32236Z' => 'bra', 'BraA08t32841Z' => 'bra', 'BraA08t34524Z' => 'bra', 'BraA09t38742Z' => 'bra', 'BraA09t39295Z' => 'bra', 'C02p47180' => 'bna', 'C02p50990' => 'bna', 'C03p19360' => 'bna', 'C03p74950' => 'bna', 'C03p91000' => 'bna', 'C04p63260' => 'bna', 'C05p27050' => 'bna', 'C06p08750' => 'bna', 'C06p11490' => 'bna', 'C07p02820' => 'bna', 'C07p17180' => 'bna', 'C07p29440' => 'bna', 'C07p63730' => 'bna', 'C09p39260' => 'bna', 'CAN.G1164.34' => 'can', 'CAN.G1164.39' => 'can', 'CAN.G1530.3' => 'can', 'CAN.G162.61' => 'can', 'CAN.G176.6' => 'can', 'CAN.G289.49' => 'can', 'CAN.G370.21' => 'can', 'CAN.G370.22' => 'can', 'CAN.G371.117' => 'can', 'CAN.G58.37' => 'can', 'CAN.G588.98' => 'can', 'CANSAT21G2266' => 'cansat', 'CANSAT25G2799' => 'cansat', 'CANSAT35G0862' => 'cansat', 'CANSAT35G1704' => 'cansat', 'CANSAT35G1760' => 'cansat', 'CANSAT56G3971' => 'cansat', 'CANSAT56G4116' => 'cansat', 'CANSAT80G1259' => 'cansat', 'CARHR027730' => 'chi', 'CARHR033880' => 'chi', 'CARHR043270' => 'chi', 'CARHR145330' => 'chi', 'CARHR145340' => 'chi', 'CARHR175570' => 'chi', 'CARHR181570' => 'chi', 'CARHR258470' => 'chi', 'CARHR260490' => 'chi', 'CARHR294220' => 'chi', 'Carub.0001s2668' => 'cru', 'Carub.0001s3257' => 'cru', 'Carub.0001s4220' => 'cru', 'Carub.0005s0179' => 'cru', 'Carub.0006s2807' => 'cru', 'Carub.0007s0039' => 'cru', 'Carub.0008s0169' => 'cru', 'Carub.0008s0636' => 'cru', 'Ca_00338_v3' => 'car', 'Ca_00542_v3' => 'car', 'Ca_01844_v3' => 'car', 'Ca_10611_v3' => 'car', 'Ca_13326_v3' => 'car', 'Ca_17944_v3' => 'car', 'Ca_18546_v3' => 'car', 'Ca_24219_v3' => 'car', 'Ca_29972_v3' => 'car', 'CBR_g3681' => 'cbr', 'CBR_g40021' => 'cbr', 'Cc01_g08140' => 'ccan', 'Cc02_g13410' => 'ccan', 'Cc02_g37480' => 'ccan', 'Cc05_g12030' => 'ccan', 'Cc09_g03370' => 'ccan', 'Cc09_g10300' => 'ccan', 'Cc10_g03530' => 'ccan', 'Cc10_g11380' => 'ccan', 'CDE01G0176' => 'cde', 'CDE02G0675' => 'cde', 'CDE02G0942' => 'cde', 'CDE02G1153' => 'cde', 'CDE02G4177' => 'cde', 'CDE04G2117' => 'cde', 'CDE04G2736' => 'cde', 'CDE08G1161' => 'cde', 'CDE09G1238' => 'cde', 'Cfa000467' => 'cfa', 'Cfa000947' => 'cfa', 'Cfa004969' => 'cfa', 'Cfa005284' => 'cfa', 'Cfa008993' => 'cfa', 'Cfa018187' => 'cfa', 'Cfa018454' => 'cfa', 'Cfa020585' => 'cfa', 'Ciclev10000424m.g' => 'ccl', 'Ciclev10003605m.g' => 'ccl', 'Ciclev10007828m.g' => 'ccl', 'Ciclev10014620m.g' => 'ccl', 'Ciclev10015169m.g' => 'ccl', 'Ciclev10018291m.g' => 'ccl', 'Ciclev10028256m.g' => 'ccl', 'Ciclev10033822m.g' => 'ccl', 'CiPaw.05G060300' => 'cil', 'CiPaw.05G085000' => 'cil', 'CiPaw.06G083700' => 'cil', 'CiPaw.06G120300' => 'cil', 'CiPaw.09G060500' => 'cil', 'CiPaw.09G123800' => 'cil', 'CiPaw.11G169700' => 'cil', 'CiPaw.12G118300' => 'cil', 'CiPaw.15G071000' => 'cil', 'CiPaw.15G081900' => 'cil', 'ClCG01G024610' => 'cla', 'ClCG03G006070' => 'cla', 'ClCG05G019250' => 'cla', 'ClCG09G009500' => 'cla', 'ClCG11G008200' => 'cla', 'ClCG11G018080' => 'cla', 'COL.COLO4_17373' => 'col', 'COL.COLO4_22994' => 'col', 'COL.COLO4_26389' => 'col', 'COL.COLO4_27170' => 'col', 'COL.COLO4_31074' => 'col', 'COL.COLO4_31465' => 'col', 'COL.COLO4_36438' => 'col', 'COL.COLO4_36439' => 'col', 'Cpa.g.c38781' => 'cpa', 'Cpa.g.sc128.12' => 'cpa', 'Cpa.g.sc166.7' => 'cpa', 'Cpa.g.sc166.8' => 'cpa', 'Cpa.g.sc20.111' => 'cpa', 'Cpa.g.sc27.31' => 'cpa', 'Cpa.g.sc64.36' => 'cpa', 'Cpa.g.sc64.37' => 'cpa', 'Cpa.g.sc66.49' => 'cpa', 'Cpa.g.sc80.64' => 'cpa', 'CsaV3_1G012320' => 'csa', 'CsaV3_2G008480' => 'csa', 'CsaV3_2G033450' => 'csa', 'CsaV3_3G044830' => 'csa', 'CsaV3_4G033710' => 'csa', 'CsaV3_6G051730' => 'csa', 'CsaV3_7G025350' => 'csa', 'CSS0001067' => 'camsi', 'CSS0005996' => 'camsi', 'CSS0006590' => 'camsi', 'CSS0009673' => 'camsi', 'CSS0010201' => 'camsi', 'CSS0010549' => 'camsi', 'CSS0011364' => 'camsi', 'CSS0014473' => 'camsi', 'CSS0014961' => 'camsi', 'CSS0020191' => 'camsi', 'CSS0021165' => 'camsi', 'CSS0022306' => 'camsi', 'CSS0030591' => 'camsi', 'CSS0030696' => 'camsi', 'CSS0032653' => 'camsi', 'CSS0037487' => 'camsi', 'CSS0041102' => 'camsi', 'CSS0041261' => 'camsi', 'CSS0046246' => 'camsi', 'CSS0049256' => 'camsi', 'DCAR_004075' => 'dca', 'DCAR_011538' => 'dca', 'DCAR_019553' => 'dca', 'DCAR_020952' => 'dca', 'DCAR_021739' => 'dca', 'DCAR_027407' => 'dca', 'DCAR_027913' => 'dca', 'DCAR_028066' => 'dca', 'Dinv05899' => 'din', 'Dinv07563' => 'din', 'Dinv08010' => 'din', 'Dinv14125' => 'din', 'Dinv20172' => 'din', 'Dinv30743' => 'din', 'Dinv31229' => 'din', 'Dinv34162' => 'din', 'Dinv36028' => 'din', 'Dinv39368' => 'din', 'Dinv40565' => 'din', 'Dinv41706' => 'din', 'Duzib052G0089' => 'dzi', 'Duzib116G0641' => 'dzi', 'Duzib132G0069' => 'dzi', 'Duzib132G1219' => 'dzi', 'Duzib147G0278' => 'dzi', 'Duzib160G0480' => 'dzi', 'Duzib170G0661' => 'dzi', 'Duzib177G0591' => 'dzi', 'Duzib187G1353' => 'dzi', 'Duzib192G0858' => 'dzi', 'Duzib192G0883' => 'dzi', 'Duzib213G0506' => 'dzi', 'Duzib235G0289' => 'dzi', 'Duzib251G0422' => 'dzi', 'ECA232G3898' => 'eca', 'ECA233G5950' => 'eca', 'ECA234G1699' => 'eca', 'ECA234G2421' => 'eca', 'ECA236G0426' => 'eca', 'ECA236G4331' => 'eca', 'ECA248G2573' => 'eca', 'EL10Ac1g00077' => 'bvu', 'EL10Ac1g01746' => 'bvu', 'EL10Ac2g03464' => 'bvu', 'EL10Ac4g08176' => 'bvu', 'EL10Ac7g17521' => 'bvu', 'EL10Ac8g20386' => 'bvu', 'EL10Ac9g21343' => 'bvu', 'EL10Ac9g22688' => 'bvu', 'Eucgr.B03434' => 'egr', 'Eucgr.D00618' => 'egr', 'Eucgr.E02395' => 'egr', 'Eucgr.F01129' => 'egr', 'Eucgr.F02622' => 'egr', 'Eucgr.F04207' => 'egr', 'FAN01G0570' => 'fan', 'FAN03G3351' => 'fan', 'FAN06G3702' => 'fan', 'FAN07G2149' => 'fan', 'FAN10G3758' => 'fan', 'FAN11G1170' => 'fan', 'FAN11G2050' => 'fan', 'FAN11G2724' => 'fan', 'FAN12G1700' => 'fan', 'FAN12G2028' => 'fan', 'FAN15G1160' => 'fan', 'FAN15G3063' => 'fan', 'FAN16G2540' => 'fan', 'FAN16G3077' => 'fan', 'FAN16G3624' => 'fan', 'FAN17G0221' => 'fan', 'FAN20G2492' => 'fan', 'FAN20G2905' => 'fan', 'FAN21G0548' => 'fan', 'FAN21G1300' => 'fan', 'FAN22G0077' => 'fan', 'FAN22G1315' => 'fan', 'FAN24G1280' => 'fan', 'FAN24G1445' => 'fan', 'FAN24G3527' => 'fan', 'FAN25G0464' => 'fan', 'FAN25G2885' => 'fan', 'FAN25G3270' => 'fan', 'FAN27G1101' => 'fan', 'FAN27G2846' => 'fan', 'FAN27G3524' => 'fan', 'FvH4_2g11770' => 'fve', 'FvH4_2g15630' => 'fve', 'FvH4_3g05570' => 'fve', 'FvH4_3g09110' => 'fve', 'FvH4_3g19940' => 'fve', 'FvH4_4g04821' => 'fve', 'FvH4_4g31480' => 'fve', 'FvH4_7g01740' => 'fve', 'Glyma.05G130400' => 'gma', 'Glyma.05G156400' => 'gma', 'Glyma.07G197000' => 'gma', 'Glyma.08G085151' => 'gma', 'Glyma.08G114500' => 'gma', 'Glyma.08G300400' => 'gma', 'Glyma.10G215800' => 'gma', 'Glyma.12G224400' => 'gma', 'Glyma.13G179300' => 'gma', 'Glyma.13G218151' => 'gma', 'Glyma.13G238800' => 'gma', 'Glyma.13G276900' => 'gma', 'Glyma.14G078200' => 'gma', 'Glyma.15G074500' => 'gma', 'Glyma.15G094100' => 'gma', 'Glyma.17G247200' => 'gma', 'Glyma.18G120100' => 'gma', 'Glyma.20G176000' => 'gma', 'Gohir.A01G063600' => 'ghi', 'Gohir.A01G170301' => 'ghi', 'Gohir.A02G060500' => 'ghi', 'Gohir.A05G133850' => 'ghi', 'Gohir.A05G161400' => 'ghi', 'Gohir.A06G012900' => 'ghi', 'Gohir.A06G035901' => 'ghi', 'Gohir.A06G127100' => 'ghi', 'Gohir.A06G210500' => 'ghi', 'Gohir.A08G008650' => 'ghi', 'Gohir.A09G072700' => 'ghi', 'Gohir.A09G088301' => 'ghi', 'Gohir.A10G040600' => 'ghi', 'Gohir.A12G036300' => 'ghi', 'Gohir.A12G143350' => 'ghi', 'Gohir.A12G165500' => 'ghi', 'Gohir.A13G145700' => 'ghi', 'Gohir.D01G050000' => 'ghi', 'Gohir.D01G051366' => 'ghi', 'Gohir.D01G161350' => 'ghi', 'Gohir.D02G065900' => 'ghi', 'Gohir.D05G164200' => 'ghi', 'Gohir.D05G355500' => 'ghi', 'Gohir.D06G010400' => 'ghi', 'Gohir.D06G111250' => 'ghi', 'Gohir.D06G132000' => 'ghi', 'Gohir.D06G210500' => 'ghi', 'Gohir.D07G165675' => 'ghi', 'Gohir.D08G062240' => 'ghi', 'Gohir.D08G086101' => 'ghi', 'Gohir.D08G138060' => 'ghi', 'Gohir.D09G072300' => 'ghi', 'Gohir.D10G041400' => 'ghi', 'Gohir.D11G191020' => 'ghi', 'Gohir.D11G212066' => 'ghi', 'Gohir.D12G036300' => 'ghi', 'Gohir.D12G168600' => 'ghi', 'Gohir.D13G150600' => 'ghi', 'Gorai.001G057300' => 'gra', 'Gorai.002G069900' => 'gra', 'Gorai.002G200000' => 'gra', 'Gorai.003G067600' => 'gra', 'Gorai.005G074800' => 'gra', 'Gorai.006G087300' => 'gra', 'Gorai.008G037500' => 'gra', 'Gorai.008G181400' => 'gra', 'Gorai.009G169400' => 'gra', 'Gorai.009G387900' => 'gra', 'Gorai.010G013300' => 'gra', 'Gorai.010G153800' => 'gra', 'Gorai.010G255800' => 'gra', 'Gorai.011G043700' => 'gra', 'Gorai.011G198900' => 'gra', 'Gorai.013G168400' => 'gra', 'GSVIVG01005212001' => 'vvi', 'GSVIVG01006163001' => 'vvi', 'GSVIVG01009625001' => 'vvi', 'GSVIVG01014338001' => 'vvi', 'GSVIVG01020005001' => 'vvi', 'GSVIVG01021450001' => 'vvi', 'GSVIVG01023975001' => 'vvi', 'GSVIVG01034490001' => 'vvi', 'HanXRQChr04g0112071' => 'han', 'HanXRQChr05g0131151' => 'han', 'HanXRQChr09g0262371' => 'han', 'HanXRQChr09g0268401' => 'han', 'HanXRQChr10g0279241' => 'han', 'HanXRQChr10g0297961' => 'han', 'HanXRQChr11g0326231' => 'han', 'HanXRQChr11g0328471' => 'han', 'HanXRQChr16g0507941' => 'han', 'HanXRQChr17g0560211' => 'han', 'Haze_02108' => 'cav', 'Haze_02428' => 'cav', 'Haze_05593' => 'cav', 'Haze_06448' => 'cav', 'Haze_09427' => 'cav', 'Haze_12022' => 'cav', 'Haze_17612' => 'cav', 'Haze_17928' => 'cav', 'Hma1.2p1_0032F.1_g019250' => 'hma', 'Hma1.2p1_0163F.1_g072690' => 'hma', 'Hma1.2p1_0265F.1_g106710' => 'hma', 'Hma1.2p1_0286F.1_g113970' => 'hma', 'Hma1.2p1_0363F.1_g136640' => 'hma', 'Hma1.2p1_0584F.1_g183470' => 'hma', 'Hma1.2p1_0885F.1_g232570' => 'hma', 'HPP92_006022' => 'vpl', 'HPP92_007320' => 'vpl', 'HPP92_011521' => 'vpl', 'HPP92_019387' => 'vpl', 'HPP92_024038' => 'vpl', 'Hund05891' => 'sun', 'Hund06450' => 'sun', 'Hund12053' => 'sun', 'Hund16800' => 'sun', 'Hund21222' => 'sun', 'Hund22896' => 'sun', 'Hund23746' => 'sun', 'Hund27083' => 'sun', 'Lalb_Chr02g0141831' => 'lal', 'Lalb_Chr02g0141841' => 'lal', 'Lalb_Chr05g0220411' => 'lal', 'Lalb_Chr06g0162081' => 'lal', 'Lalb_Chr09g0327651' => 'lal', 'Lalb_Chr13g0295051' => 'lal', 'Lalb_Chr15g0086801' => 'lal', 'Lalb_Chr16g0383781' => 'lal', 'Lalb_Chr16g0383791' => 'lal', 'Lalb_Chr18g0055441' => 'lal', 'Lalb_Chr18g0059611' => 'lal', 'Lalb_Chr20g0109661' => 'lal', 'Lalb_Chr20g0109831' => 'lal', 'Lalb_Chr20g0121871' => 'lal', 'Lalb_Chr22g0355361' => 'lal', 'Lalb_Chr25g0286371' => 'lal', 'Lj1A1187G43' => 'lonja', 'Lj1A1205T50' => 'lonja', 'Lj1A800G33' => 'lonja', 'Lj1C1187T7' => 'lonja', 'Lj1C843T11' => 'lonja', 'Lj1g0010940' => 'lja', 'Lj2A288T69' => 'lonja', 'Lj3g0024276' => 'lja', 'Lj4A47T76' => 'lonja', 'Lj4g0005805' => 'lja', 'Lj4g0006097' => 'lja', 'Lj4g0008528' => 'lja', 'Lj4g0024907' => 'lja', 'Lj5g0012472' => 'lja', 'Lj5g0018648' => 'lja', 'Lj6C789G1' => 'lonja', 'Lj6g0004000' => 'lja', 'Lj7A292G67' => 'lonja', 'Lj7A292T64' => 'lonja', 'Lj9A400T58' => 'lonja', 'Lsat_1_v5_gn_1_126181' => 'lsa', 'Lsat_1_v5_gn_4_123041' => 'lsa', 'Lsat_1_v5_gn_4_133620' => 'lsa', 'Lsat_1_v5_gn_4_53221' => 'lsa', 'Lsat_1_v5_gn_4_71961' => 'lsa', 'Lsat_1_v5_gn_7_105241' => 'lsa', 'Lsat_1_v5_gn_7_21361' => 'lsa', 'Lsat_1_v5_gn_7_28860' => 'lsa', 'Lsat_1_v5_gn_7_31260' => 'lsa', 'Lsat_1_v5_gn_8_52801' => 'lsa', 'Manes.02G191400' => 'mes', 'Manes.03G110100' => 'mes', 'Manes.04G071100' => 'mes', 'Manes.05G100500' => 'mes', 'Manes.05G164700' => 'mes', 'Manes.15G087000' => 'mes', 'Manes.15G121500' => 'mes', 'Manes.16G028300' => 'mes', 'Manes.17G046100' => 'mes', 'Manes.17G069800' => 'mes', 'Manes.18G100500' => 'mes', 'Mapoly0002s0109' => 'mpo', 'Mapoly0024s0007' => 'mpo', 'Mapoly0089s0032' => 'mpo', 'MBI04_g42241_MAGBIO' => 'mbi', 'MBI05_g11988_MAGBIO' => 'mbi', 'MBI05_g35452_MAGBIO' => 'mbi', 'MBI07_g30179_MAGBIO' => 'mbi', 'MBI07_g35859_MAGBIO' => 'mbi', 'MBI07_g35860_MAGBIO' => 'mbi', 'MBI07_g37166_MAGBIO' => 'mbi', 'MBI08_g18172_MAGBIO' => 'mbi', 'MBI09_g08441_MAGBIO' => 'mbi', 'MBI13_g01676_MAGBIO' => 'mbi', 'MBI14_g42955_MAGBIO' => 'mbi', 'MBI16_g13161_MAGBIO' => 'mbi', 'MBI17_g27204_MAGBIO' => 'mbi', 'MBI19_g21595_MAGBIO' => 'mbi', 'MD00G1148400' => 'mdo', 'MD02G1301200' => 'mdo', 'MD03G1227800' => 'mdo', 'MD05G1041100' => 'mdo', 'MD05G1124800' => 'mdo', 'MD05G1284000' => 'mdo', 'MD05G1338800' => 'mdo', 'MD05G1338900' => 'mdo', 'MD07G1022800' => 'mdo', 'MD10G1047500' => 'mdo', 'MD10G1127500' => 'mdo', 'MD10G1262300' => 'mdo', 'MD10G1293800' => 'mdo', 'MD16G1074300' => 'mdo', 'Medtr1g021670' => 'mtr', 'Medtr1g096320' => 'mtr', 'Medtr2g013690' => 'mtr', 'Medtr2g019450' => 'mtr', 'Medtr2g085170' => 'mtr', 'Medtr4g088785' => 'mtr', 'Medtr8g055930' => 'mtr', 'Medtr8g085850' => 'mtr', 'MELO3C002605.2' => 'cme', 'MELO3C003891.2' => 'cme', 'MELO3C004012.2' => 'cme', 'MELO3C007134.2' => 'cme', 'MELO3C008118.2' => 'cme', 'MELO3C016700.2' => 'cme', 'MELO3C024127.2' => 'cme', 'MELO3C033361.2' => 'cme', 'MELO3C033362.2' => 'cme', 'Migut.C00430' => 'egut', 'Migut.C01246' => 'egut', 'Migut.E00101' => 'egut', 'Migut.H01486' => 'egut', 'Migut.H01939' => 'egut', 'Migut.K00360' => 'egut', 'Migut.M00910' => 'egut', 'Migut.M01139' => 'egut', 'Migut.N02677' => 'egut', 'MSTRG.13252' => 'ama', 'MSTRG.14701' => 'ama', 'MSTRG.1521' => 'ama', 'MSTRG.15884' => 'ama', 'MSTRG.16242' => 'ama', 'MSTRG.22285' => 'ama', 'MSTRG.22444' => 'ama', 'MSTRG.2349' => 'ama', 'MSTRG.26308' => 'ama', 'MSTRG.28296' => 'ama', 'MSTRG.9895' => 'ama', 'Nitab4.5_0000110g0060' => 'nta', 'Nitab4.5_0000420g0130' => 'nta', 'Nitab4.5_0000422g0030' => 'nta', 'Nitab4.5_0000560g0180' => 'nta', 'Nitab4.5_0000703g0100' => 'nta', 'Nitab4.5_0000786g0200' => 'nta', 'Nitab4.5_0001336g0020' => 'nta', 'Nitab4.5_0001796g0030' => 'nta', 'Nitab4.5_0003348g0060' => 'nta', 'Nitab4.5_0003698g0040' => 'nta', 'Nitab4.5_0003942g0090' => 'nta', 'Nitab4.5_0004775g0070' => 'nta', 'Nitab4.5_0004864g0030' => 'nta', 'Nitab4.5_0005615g0020' => 'nta', 'Nitab4.5_0009288g0030' => 'nta', 'Nitab4.5_0009341g0010' => 'nta', 'Nitab4.5_0009535g0010' => 'nta', 'Nn1g03995' => 'nnu', 'Nn1g04100' => 'nnu', 'Nn1g06530' => 'nnu', 'Nn3g16404' => 'nnu', 'Nn3g17212' => 'nnu', 'Nn3g20776' => 'nnu', 'Nn3g21923' => 'nnu', 'Nn5g27737' => 'nnu', 'Nn5g29461' => 'nnu', 'Nn7g38355' => 'nnu', 'Nn8g39873' => 'nnu', 'Oeu000548.2' => 'oeu', 'Oeu004672.1' => 'oeu', 'Oeu015605.2' => 'oeu', 'Oeu016092.1' => 'oeu', 'Oeu017879.3' => 'oeu', 'Oeu024910.1' => 'oeu', 'Oeu028965.1' => 'oeu', 'Oeu031269.1' => 'oeu', 'Oeu031270.1' => 'oeu', 'Oeu032535.1' => 'oeu', 'Oeu034151.1' => 'oeu', 'Oeu034152.1' => 'oeu', 'Oeu034588.2' => 'oeu', 'Oeu050846.1' => 'oeu', 'Oeu050849.2' => 'oeu', 'Oeu051063.2' => 'oeu', 'Oeu052368.1' => 'oeu', 'Oeu052370.1' => 'oeu', 'Os01g0210400' => 'osa', 'Os01g0304300' => 'osa', 'Os01g0749100' => 'osa', 'Os02g0745800' => 'osa', 'Os03g0769050' => 'osa', 'Os05g0531500' => 'osa', 'Os06g0724300' => 'osa', 'Os11g0198100' => 'osa', 'Peaxi162Scf00069g01425' => 'pax', 'Peaxi162Scf00280g00811' => 'pax', 'Peaxi162Scf00310g00615' => 'pax', 'Peaxi162Scf00362g00542' => 'pax', 'Peaxi162Scf00461g00310' => 'pax', 'Peaxi162Scf00530g00118' => 'pax', 'Peaxi162Scf00541g00057' => 'pax', 'Peaxi162Scf00661g00017' => 'pax', 'Peaxi162Scf00926g00027' => 'pax', 'Peaxi162Scf01064g00263' => 'pax', 'Peaxi162Scf01211g00135' => 'pax', 'PGR004G2336' => 'pgr', 'PGR042G0327' => 'pgr', 'PGR042G1957' => 'pgr', 'PGR042G2003' => 'pgr', 'PGR042G3929' => 'pgr', 'PGR083G1137' => 'pgr', 'PGR083G1364' => 'pgr', 'PGSC0003DMG400003381' => 'stu', 'PGSC0003DMG400003417' => 'stu', 'PGSC0003DMG400008981' => 'stu', 'PGSC0003DMG400012417' => 'stu', 'PGSC0003DMG400012823' => 'stu', 'PGSC0003DMG400016885' => 'stu', 'PGSC0003DMG400022812' => 'stu', 'PGSC0003DMG400029726' => 'stu', 'PGSC0003DMG401009243' => 'stu', 'PGSC0003DMG401031505' => 'stu', 'PGSC0003DMG402031505' => 'stu', 'Phvul.001G017600' => 'pvu', 'Phvul.002G193500' => 'pvu', 'Phvul.002G228900' => 'pvu', 'Phvul.002G236800' => 'pvu', 'Phvul.003G049500' => 'pvu', 'Phvul.005G072000' => 'pvu', 'Phvul.006G164800' => 'pvu', 'Phvul.006G185100' => 'pvu', 'Phvul.007G090000' => 'pvu', 'Potri.001G399800' => 'ptr', 'Potri.002G149900' => 'ptr', 'Potri.004G044100' => 'ptr', 'Potri.004G177600' => 'ptr', 'Potri.009G138000' => 'ptr', 'Potri.010G094000' => 'ptr', 'Potri.011G053000' => 'ptr', 'Potri.011G119300' => 'ptr', 'Potri.013G113700' => 'ptr', 'Potri.018G107800' => 'ptr', 'Potri.019G084100' => 'ptr', 'Pp3c14_23720' => 'ppa', 'Pp3c16_6340' => 'ppa', 'Pp3c23_13420' => 'ppa', 'Pp3c24_2740' => 'ppa', 'Pp3c25_860' => 'ppa', 'Pp3c8_21750' => 'ppa', 'Prupe.1G273000' => 'ppe', 'Prupe.1G273700' => 'ppe', 'Prupe.1G274100' => 'ppe', 'Prupe.2G023300' => 'ppe', 'Prupe.4G048000' => 'ppe', 'Prupe.4G080400' => 'ppe', 'Prupe.4G181200' => 'ppe', 'Prupe.8G056900' => 'ppe', 'Prupe.8G168700' => 'ppe', 'Psat1g189080' => 'psa', 'Psat1g204760' => 'psa', 'Psat4g175560' => 'psa', 'Psat4g177720' => 'psa', 'Psat5g244240' => 'psa', 'Psat6g010720' => 'psa', 'Psat6g187200' => 'psa', 'Psat7g072040' => 'psa', 'PSO017G3501' => 'pso', 'PSO063G2148' => 'pso', 'PSO063G5608' => 'pso', 'PSO210G6392' => 'pso', 'PSO541G2319' => 'pso', 'PSO541G2836' => 'pso', 'PSO541G4012' => 'pso', 'PSO541G6253' => 'pso', 'PSO675G0580' => 'pso', 'PSO675G0856' => 'pso', 'PSO675G5635' => 'pso', 'PSO675G9157' => 'pso', 'PSO832G1660' => 'pso', 'PSO832G1969' => 'pso', 'QL02p007186' => 'qlo', 'QL02p033904' => 'qlo', 'QL03p064391' => 'qlo', 'QL05p040593' => 'qlo', 'QL05p058242' => 'qlo', 'QL08p021825' => 'qlo', 'QL11p004981' => 'qlo', 'RcHm_v2.0_Chr1g0318301' => 'rch', 'RcHm_v2.0_Chr4g0418501' => 'rch', 'RcHm_v2.0_Chr4g0439971' => 'rch', 'RcHm_v2.0_Chr5g0008541' => 'rch', 'RcHm_v2.0_Chr5g0014101' => 'rch', 'RcHm_v2.0_Chr5g0014131' => 'rch', 'RcHm_v2.0_Chr5g0033621' => 'rch', 'RcHm_v2.0_Chr6g0272041' => 'rch', 'RcHm_v2.0_Chr6g0278831' => 'rch', 'Rhsim02G0130400' => 'rsi', 'Rhsim02G0171100' => 'rsi', 'Rhsim05G0053000' => 'rsi', 'Rhsim05G0053100' => 'rsi', 'Rhsim06G0096500' => 'rsi', 'Rhsim06G0096600' => 'rsi', 'Rhsim06G0199100' => 'rsi', 'Rhsim12G0062300' => 'rsi', 'Rhsim12G0062800' => 'rsi', 'Sabra02G0118600' => 'sbr', 'Sabra04G0027300' => 'sbr', 'Sabra04G0119500' => 'sbr', 'Sabra08G0112500' => 'sbr', 'Sabra11G0036800' => 'sbr', 'Sabra11G0103800' => 'sbr', 'Sabra13G0096300' => 'sbr', 'Sabra16G0262300' => 'sbr', 'Sabra18G0091700' => 'sbr', 'Sabra19G0095400' => 'sbr', 'SalBow6G3080' => 'sbo', 'SalBow7G1157' => 'sbo', 'SalBow7G2123' => 'sbo', 'SalBow7G2285' => 'sbo', 'SalBow7G3537' => 'sbo', 'SalBow8G2947' => 'sbo', 'SalBow8G4463' => 'sbo', 'SalBow8G5466' => 'sbo', 'Sc01g0001750' => 'sci', 'Sc02g0006640' => 'sci', 'Sc02g0006670' => 'sci', 'Sc04g0008220' => 'sci', 'Sc05g0006190' => 'sci', 'Sc08g0002760' => 'sci', 'Sc17g0006170' => 'sci', 'Sc22g0002050' => 'sci', 'Sc23g0001190' => 'sci', 'Sc24g0000980' => 'sci', 'Sed0006245' => 'sed', 'Sed0007543' => 'sed', 'Sed0009411' => 'sed', 'Sed0010765' => 'sed', 'Sed0012944' => 'sed', 'Sed0014682' => 'sed', 'Sed0016174' => 'sed', 'Sed0016796' => 'sed', 'Sed0020317' => 'sed', 'Sed0021467' => 'sed', 'SEGI_01316' => 'sgi', 'SEGI_03374' => 'sgi', 'SEGI_16265' => 'sgi', 'SEGI_18569' => 'sgi', 'SEGI_20351' => 'sgi', 'SEGI_26395' => 'sgi', 'SEGI_29469' => 'sgi', 'SEGI_34771' => 'sgi', 'SEGI_36769' => 'sgi', 'SEGI_37139' => 'sgi', 'SGA_v2.0_scaffold100G29687' => 'sas', 'SGA_v2.0_scaffold118G32472' => 'sas', 'SGA_v2.0_scaffold14G07051' => 'sas', 'SGA_v2.0_scaffold183G39845' => 'sas', 'SGA_v2.0_scaffold1G00174' => 'sas', 'SGA_v2.0_scaffold22G09714' => 'sas', 'SGA_v2.0_scaffold333G48992' => 'sas', 'SGA_v2.0_scaffold46G17491' => 'sas', 'SGA_v2.0_scaffold49G18294' => 'sas', 'SGA_v2.0_scaffold63G21658' => 'sas', 'SHI01741' => 'shi', 'SHI05771' => 'shi', 'SHI18077' => 'shi', 'SHI20525' => 'shi', 'SHI20527' => 'shi', 'SHI20528' => 'shi', 'SMO172G0185' => 'smo', 'SMO198G0020' => 'smo', 'SMO351G0006' => 'smo', 'SMO356G0118' => 'smo', 'SMO358G0296' => 'smo', 'SMO367G0079' => 'smo', 'SMO367G1277' => 'smo', 'Solyc01g014220.3' => 'sly', 'Solyc01g111770.2' => 'sly', 'Solyc02g078180.3' => 'sly', 'Solyc03g006430.3' => 'sly', 'Solyc03g006456.1' => 'sly', 'Solyc03g079860.2' => 'sly', 'Solyc04g079770.3' => 'sly', 'Solyc05g007430.4' => 'sly', 'Solyc07g063150.3' => 'sly', 'Solyc08g016620.3' => 'sly', 'Solyc09g057590.3' => 'sly', 'Solyc09g057600.1' => 'sly', 'Solyc10g009050.3' => 'sly', 'Solyc11g017420.2' => 'sly', 'Sopen01g053810' => 'spe', 'Sopen02g023040' => 'spe', 'Sopen03g002440' => 'spe', 'Sopen04g033350' => 'spe', 'Sopen05g003310' => 'spe', 'Sopen07g004050' => 'spe', 'Sopen07g031340' => 'spe', 'Sopen08g006990' => 'spe', 'Sopen10g004830' => 'spe', 'Sopen11g009370' => 'spe', 'Sp1g24450' => 'spa', 'Sp1g29670' => 'spa', 'Sp1g39600' => 'spa', 'Sp2g11080' => 'spa', 'Sp2g13970' => 'spa', 'Sp4g16130' => 'spa', 'Sp6g13080' => 'spa', 'Sp7g37270' => 'spa', 'TAR371G0065' => 'tar', 'TAR376G0340' => 'tar', 'TAR376G0435' => 'tar', 'TAR381G0002' => 'tar', 'TAR381G1236' => 'tar', 'TAR624G0055' => 'tar', 'TAR624G0324' => 'tar', 'TAR624G0696' => 'tar', 'TAR624G0906' => 'tar', 'TAR625G0107' => 'tar', 'TAR626G0015' => 'tar', 'TAR626G1356' => 'tar', 'TAR627G0888' => 'tar', 'TAR628G0399' => 'tar', 'TAR628G1327' => 'tar', 'TAR629G2831' => 'tar', 'TAR629G2874' => 'tar', 'TAR633G1432' => 'tar', 'TAR633G2771' => 'tar', 'THA.LOC104803394' => 'tha', 'THA.LOC104805153' => 'tha', 'THA.LOC104806784' => 'tha', 'THA.LOC104810473' => 'tha', 'THA.LOC104813100' => 'tha', 'THA.LOC104814215' => 'tha', 'THA.LOC104815554' => 'tha', 'THA.LOC104820544' => 'tha', 'THA.LOC104824754' => 'tha', 'THA.LOC104827717' => 'tha', 'Thecc.02G031400' => 'tca', 'Thecc.02G055900' => 'tca', 'Thecc.02G350800' => 'tca', 'Thecc.06G150900' => 'tca', 'Thecc.06G186600' => 'tca', 'Thecc.07G089600' => 'tca', 'Thecc.08G020400' => 'tca', 'Thecc.08G182100' => 'tca', 'Thhalv10000873m.g' => 'esa', 'Thhalv10004185m.g' => 'esa', 'Thhalv10006981m.g' => 'esa', 'Thhalv10007204m.g' => 'esa', 'Thhalv10011374m.g' => 'esa', 'Thhalv10013482m.g' => 'esa', 'Thhalv10017801m.g' => 'esa', 'Thhalv10024983m.g' => 'esa', 'TPR.G12072' => 'tpr', 'TPR.G15769' => 'tpr', 'TPR.G16504' => 'tpr', 'TPR.G16506' => 'tpr', 'TPR.G24345' => 'tpr', 'TPR.G26666' => 'tpr', 'TPR.G27320' => 'tpr', 'TPR.G31819' => 'tpr', 'TPR.G38879' => 'tpr', 'TPR.G39015' => 'tpr', 'TPR.G8819' => 'tpr', 'TWI09G0924' => 'twi', 'TWI12G0811' => 'twi', 'TWI12G1294' => 'twi', 'TWI31G0150' => 'twi', 'TWI36G1262' => 'twi', 'TWI38G1287' => 'twi', 'TWI38G1633' => 'twi', 'TWI38G1982' => 'twi', 'TWI39G0116' => 'twi', 'TWI60G1011' => 'twi', 'TWI63G0171' => 'twi', 'TWI73G0839' => 'twi', 'TWI79G1511' => 'twi', 'unitig_0.g915' => 'ugi', 'unitig_0.g916' => 'ugi', 'unitig_21.g20219' => 'ugi', 'unitig_21.g20416' => 'ugi', 'unitig_578.g16132' => 'ugi', 'unitig_578.g16718' => 'ugi', 'unitig_62.g23481' => 'ugi', 'unitig_744.g24535' => 'ugi', 'unitig_749.g13525' => 'ugi', 'vmacro01248' => 'vma', 'vmacro02290' => 'vma', 'vmacro10946' => 'vma', 'vmacro11865' => 'vma', 'vmacro12493' => 'vma', 'vmacro17322' => 'vma', 'vmacro21599' => 'vma', 'vmacro23041' => 'vma', 'VMungo0251G0004' => 'vmu', 'VMungo0251G2639' => 'vmu', 'VMungo0251G2967' => 'vmu', 'VMungo0540G0864' => 'vmu', 'VMungo0540G1569' => 'vmu', 'VMungo0647G0317' => 'vmu', 'VMungo0720G1373' => 'vmu', 'VMungo0720G1508' => 'vmu', 'VMungo1080G0485' => 'vmu', 'VMungo1215G3177' => 'vmu', 'Zm00001eb112600' => 'zma', 'Zm00001eb120220' => 'zma', 'Zm00001eb153240' => 'zma', 'Zm00001eb168880' => 'zma', 'Zm00001eb213920' => 'zma', 'Zm00001eb228280' => 'zma', 'Zm00001eb254580' => 'zma', 'Zm00001eb272180' => 'zma', 'Zm00001eb293190' => 'zma', 'Zm00001eb322930' => 'zma', 'Zm00001eb353360' => 'zma', 'Zm00001eb353390' => 'zma', 'Zm00001eb353430' => 'zma', 'Zm00001eb353440' => 'zma', 'Zm00001eb353780' => 'zma' ) $gf_id = 'HOM05D000499' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000499' ) $data_identifier = 'HOM05D000499' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 29, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 12, 'amhyb' => (int) 8, 'aly' => (int) 12, 'aox' => (int) 9, 'arhy' => (int) 26, 'ath' => (int) 8, 'atr' => (int) 7, 'acertr' => (int) 10, 'cqu' => (int) 15, 'bca' => (int) 29, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 11, 'cansat' => (int) 8, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 9, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 8, 'cpa' => (int) 10, 'csa' => (int) 7, 'camsi' => (int) 20, 'dca' => (int) 8, 'din' => (int) 12, 'dzi' => (int) 14, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 6, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 38, 'gra' => (int) 16, 'vvi' => (int) 8, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 5, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 11, 'lja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 11, 'mpo' => (int) 3, 'mbi' => (int) 14, 'mdo' => (int) 14, 'mtr' => (int) 8, 'cme' => (int) 9, 'egut' => (int) 9, 'ama' => (int) 11, 'nta' => (int) 17, 'nnu' => (int) 11, 'oeu' => (int) 18, 'osa' => (int) 8, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 6, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 9, 'rsi' => (int) 9, 'sbr' => (int) 10, 'sbo' => (int) 8, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 10, 'sas' => (int) 10, 'shi' => (int) 6, 'smo' => (int) 7, 'sly' => (int) 14, 'spe' => (int) 10, 'spa' => (int) 8, 'tar' => (int) 19, 'tha' => (int) 10, 'tca' => (int) 8, 'esa' => (int) 8, 'tpr' => (int) 11, 'twi' => (int) 13, 'ugi' => (int) 9, 'vma' => (int) 8, 'vmu' => (int) 10, 'zma' => (int) 15 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb353780' $species_info = array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ) $local_species = 'esa' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000499', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1066', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p29780' => 'bna', 'A02p33180' => 'bna', 'A03p16470' => 'bna', 'A03p66010' => 'bna', 'A04p25970' => 'bna', 'A06p01270' => 'bna', 'A06p46080' => 'bna', 'A07p11400' => 'bna', 'A08p01840' => 'bna', 'A08p08230' => 'bna', 'A08p25740' => 'bna', 'A09p32070' => 'bna', 'A09p37830' => 'bna', 'A09p42840' => 'bna', 'A09p42850' => 'bna', 'Aa31LG10G2060' => 'aar', 'Aa31LG2G7410' => 'aar', 'Aa31LG6G10200' => 'aar', 'Aa31LG6G16680' => 'aar', 'Aa31LG6G8470' => 'aar', 'Aa31LG9G12730' => 'aar', 'Aa31LG9G13680' => 'aar', 'Aa31LG9G14920' => 'aar', 'Aa31LG9G6650' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4977' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5467' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3254' => 'aag', 'Actinidia02578' => 'ach', 'Actinidia07693' => 'ach', 'Actinidia08413' => 'ach', 'Actinidia08414' => 'ach', 'Actinidia15289' => 'ach', 'Actinidia19871' => 'ach', 'Actinidia21475' => 'ach', 'Actinidia22576' => 'ach', 'Actinidia28327' => 'ach', 'Actinidia32491' => 'ach', 'Actinidia39463' => 'ach', 'Actinidia39571' => 'ach', 'Ah.01g013750' => 'amhyb', 'Ah.01g023210' => 'amhyb', 'Ah.04g164850' => 'amhyb', 'Ah.05g178060' => 'amhyb', 'Ah.07g204270' => 'amhyb', 'Ah.07g208480' => 'amhyb', 'Ah.09g237410' => 'amhyb', 'Ah.14g089460' => 'amhyb', 'AL1G41790' => 'aly', 'AL1G49050' => 'aly', 'AL1G53810' => 'aly', 'AL1G61400' => 'aly', 'AL4G18580' => 'aly', 'AL5G12510' => 'aly', 'AL5G12540' => 'aly', 'AL6G43230' => 'aly', 'AL7G10370' => 'aly', 'AL7G19250' => 'aly', 'AL8G12240' => 'aly', 'AL8G18540' => 'aly', 'Aqoxy1G02409' => 'aox', 'Aqoxy2G03993' => 'aox', 'Aqoxy3G03357' => 'aox', 'Aqoxy4G00785' => 'aox', 'Aqoxy5G02598' => 'aox', 'Aqoxy6G00132' => 'aox', 'Aqoxy7G01776' => 'aox', 'Aqoxy7G02316' => 'aox', 'Aqoxy7G03973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.12AFKW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B8730' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27IQR1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3F75VG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3RE0GA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41TCQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.527VTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FIR39' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5W8UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DA38EV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ63HS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H1I32C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HC27T5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4M8AP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7N3CZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9UVDZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LS1NQA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT1D4B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SKC4TM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCFV76' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF9Q1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQWD9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1ZM88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WE07RT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YCK7VH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJE6Q6' => 'arhy', 'AT1G28240' => 'ath', 'AT1G34550' => 'ath', 'AT1G53040' => 'ath', 'AT2G02910' => 'ath', 'AT4G09630' => 'ath', 'AT4G38500' => 'ath', 'AT5G42660' => 'ath', 'AT5G46220' => 'ath', 'ATR0152G026' => 'atr', 'ATR0564G343' => 'atr', 'ATR0706G151' => 'atr', 'ATR0733G207' => 'atr', 'ATR0751G234' => 'atr', 'ATR0807G048' => 'atr', 'ATR1091G084' => 'atr', 'Atru.chr10.1229' => 'acertr', 'Atru.chr10.1230' => 'acertr', 'Atru.chr10.1874' => 'acertr', 'Atru.chr11.1808' => 'acertr', 'Atru.chr13.1795' => 'acertr', 'Atru.chr13.570' => 'acertr', 'Atru.chr2.2608' => 'acertr', 'Atru.chr2.2609' => 'acertr', 'Atru.chr5.3428' => 'acertr', 'Atru.chr8.1171' => 'acertr', 'AUR62004651' => 'cqu', 'AUR62008675' => 'cqu', 'AUR62010014' => 'cqu', 'AUR62013004' => 'cqu', 'AUR62014825' => 'cqu', 'AUR62015015' => 'cqu', 'AUR62015151' => 'cqu', 'AUR62017020' => 'cqu', 'AUR62019422' => 'cqu', 'AUR62023570' => 'cqu', 'AUR62025571' => 'cqu', 'AUR62029098' => 'cqu', 'AUR62033863' => 'cqu', 'AUR62034296' => 'cqu', 'AUR62040075' => 'cqu', 'BcaB02g07334' => 'bca', 'BcaB02g10575' => 'bca', 'BcaB03g12119' => 'bca', 'BcaB03g12120' => 'bca', 'BcaB03g13945' => 'bca', 'BcaB04g17123' => 'bca', 'BcaB04g17867' => 'bca', 'BcaB04g19839' => 'bca', 'BcaB07g30317' => 'bca', 'BcaB07g32432' => 'bca', 'BcaB07g33362' => 'bca', 'BcaB08g36611' => 'bca', 'BcaC01g00028' => 'bca', 'BcaC01g01356' => 'bca', 'BcaC01g02034' => 'bca', 'BcaC01g06051' => 'bca', 'BcaC03g16839' => 'bca', 'BcaC03g17176' => 'bca', 'BcaC05g26829' => 'bca', 'BcaC06g31490' => 'bca', 'BcaC06g35344' => 'bca', 'BcaC06g36570' => 'bca', 'BcaC07g37537' => 'bca', 'BcaC08g43491' => 'bca', 'BcaC08g43773' => 'bca', 'BcaNung00234' => 'bca', 'BcaNung01982' => 'bca', 'BcaNung03707' => 'bca', 'BcaNung06454' => 'bca', 'BolC2t10762H' => 'bol', 'BolC2t11191H' => 'bol', 'BolC3t14322H' => 'bol', 'BolC3t19747H' => 'bol', 'BolC3t21425H' => 'bol', 'BolC4t27800H' => 'bol', 'BolC5t31423H' => 'bol', 'BolC6t35951H' => 'bol', 'BolC6t36282H' => 'bol', 'BolC7t40678H' => 'bol', 'BolC7t40679H' => 'bol', 'BolC7t42222H' => 'bol', 'BolC7t43492H' => 'bol', 'BolC7t46785H' => 'bol', 'BolC8t47853H' => 'bol', 'BolC9t56805H' => 'bol', 'BraA02t08000Z' => 'bra', 'BraA02t08341Z' => 'bra', 'BraA03t10936Z' => 'bra', 'BraA03t15657Z' => 'bra', 'BraA04t18100Z' => 'bra', 'BraA05t20523Z' => 'bra', 'BraA06t23353Z' => 'bra', 'BraA06t27473Z' => 'bra', 'BraA06t27769Z' => 'bra', 'BraA07t28928Z' => 'bra', 'BraA08t32236Z' => 'bra', 'BraA08t32841Z' => 'bra', 'BraA08t34524Z' => 'bra', 'BraA09t38742Z' => 'bra', 'BraA09t39295Z' => 'bra', 'C02p47180' => 'bna', 'C02p50990' => 'bna', 'C03p19360' => 'bna', 'C03p74950' => 'bna', 'C03p91000' => 'bna', 'C04p63260' => 'bna', 'C05p27050' => 'bna', 'C06p08750' => 'bna', 'C06p11490' => 'bna', 'C07p02820' => 'bna', 'C07p17180' => 'bna', 'C07p29440' => 'bna', 'C07p63730' => 'bna', 'C09p39260' => 'bna', 'CAN.G1164.34' => 'can', 'CAN.G1164.39' => 'can', 'CAN.G1530.3' => 'can', 'CAN.G162.61' => 'can', 'CAN.G176.6' => 'can', 'CAN.G289.49' => 'can', 'CAN.G370.21' => 'can', 'CAN.G370.22' => 'can', 'CAN.G371.117' => 'can', 'CAN.G58.37' => 'can', 'CAN.G588.98' => 'can', 'CANSAT21G2266' => 'cansat', 'CANSAT25G2799' => 'cansat', 'CANSAT35G0862' => 'cansat', 'CANSAT35G1704' => 'cansat', 'CANSAT35G1760' => 'cansat', 'CANSAT56G3971' => 'cansat', 'CANSAT56G4116' => 'cansat', 'CANSAT80G1259' => 'cansat', 'CARHR027730' => 'chi', 'CARHR033880' => 'chi', 'CARHR043270' => 'chi', 'CARHR145330' => 'chi', 'CARHR145340' => 'chi', 'CARHR175570' => 'chi', 'CARHR181570' => 'chi', 'CARHR258470' => 'chi', 'CARHR260490' => 'chi', 'CARHR294220' => 'chi', 'Carub.0001s2668' => 'cru', 'Carub.0001s3257' => 'cru', 'Carub.0001s4220' => 'cru', 'Carub.0005s0179' => 'cru', 'Carub.0006s2807' => 'cru', 'Carub.0007s0039' => 'cru', 'Carub.0008s0169' => 'cru', 'Carub.0008s0636' => 'cru', 'Ca_00338_v3' => 'car', 'Ca_00542_v3' => 'car', 'Ca_01844_v3' => 'car', 'Ca_10611_v3' => 'car', 'Ca_13326_v3' => 'car', 'Ca_17944_v3' => 'car', 'Ca_18546_v3' => 'car', 'Ca_24219_v3' => 'car', 'Ca_29972_v3' => 'car', 'CBR_g3681' => 'cbr', 'CBR_g40021' => 'cbr', 'Cc01_g08140' => 'ccan', 'Cc02_g13410' => 'ccan', 'Cc02_g37480' => 'ccan', 'Cc05_g12030' => 'ccan', 'Cc09_g03370' => 'ccan', 'Cc09_g10300' => 'ccan', 'Cc10_g03530' => 'ccan', 'Cc10_g11380' => 'ccan', 'CDE01G0176' => 'cde', 'CDE02G0675' => 'cde', 'CDE02G0942' => 'cde', 'CDE02G1153' => 'cde', 'CDE02G4177' => 'cde', 'CDE04G2117' => 'cde', 'CDE04G2736' => 'cde', 'CDE08G1161' => 'cde', 'CDE09G1238' => 'cde', 'Cfa000467' => 'cfa', 'Cfa000947' => 'cfa', 'Cfa004969' => 'cfa', 'Cfa005284' => 'cfa', 'Cfa008993' => 'cfa', 'Cfa018187' => 'cfa', 'Cfa018454' => 'cfa', 'Cfa020585' => 'cfa', 'Ciclev10000424m.g' => 'ccl', 'Ciclev10003605m.g' => 'ccl', 'Ciclev10007828m.g' => 'ccl', 'Ciclev10014620m.g' => 'ccl', 'Ciclev10015169m.g' => 'ccl', 'Ciclev10018291m.g' => 'ccl', 'Ciclev10028256m.g' => 'ccl', 'Ciclev10033822m.g' => 'ccl', 'CiPaw.05G060300' => 'cil', 'CiPaw.05G085000' => 'cil', 'CiPaw.06G083700' => 'cil', 'CiPaw.06G120300' => 'cil', 'CiPaw.09G060500' => 'cil', 'CiPaw.09G123800' => 'cil', 'CiPaw.11G169700' => 'cil', 'CiPaw.12G118300' => 'cil', 'CiPaw.15G071000' => 'cil', 'CiPaw.15G081900' => 'cil', 'ClCG01G024610' => 'cla', 'ClCG03G006070' => 'cla', 'ClCG05G019250' => 'cla', 'ClCG09G009500' => 'cla', 'ClCG11G008200' => 'cla', 'ClCG11G018080' => 'cla', 'COL.COLO4_17373' => 'col', 'COL.COLO4_22994' => 'col', 'COL.COLO4_26389' => 'col', 'COL.COLO4_27170' => 'col', 'COL.COLO4_31074' => 'col', 'COL.COLO4_31465' => 'col', 'COL.COLO4_36438' => 'col', 'COL.COLO4_36439' => 'col', 'Cpa.g.c38781' => 'cpa', 'Cpa.g.sc128.12' => 'cpa', 'Cpa.g.sc166.7' => 'cpa', 'Cpa.g.sc166.8' => 'cpa', 'Cpa.g.sc20.111' => 'cpa', 'Cpa.g.sc27.31' => 'cpa', 'Cpa.g.sc64.36' => 'cpa', 'Cpa.g.sc64.37' => 'cpa', 'Cpa.g.sc66.49' => 'cpa', 'Cpa.g.sc80.64' => 'cpa', 'CsaV3_1G012320' => 'csa', 'CsaV3_2G008480' => 'csa', 'CsaV3_2G033450' => 'csa', 'CsaV3_3G044830' => 'csa', 'CsaV3_4G033710' => 'csa', 'CsaV3_6G051730' => 'csa', 'CsaV3_7G025350' => 'csa', 'CSS0001067' => 'camsi', 'CSS0005996' => 'camsi', 'CSS0006590' => 'camsi', 'CSS0009673' => 'camsi', 'CSS0010201' => 'camsi', 'CSS0010549' => 'camsi', 'CSS0011364' => 'camsi', 'CSS0014473' => 'camsi', 'CSS0014961' => 'camsi', 'CSS0020191' => 'camsi', 'CSS0021165' => 'camsi', 'CSS0022306' => 'camsi', 'CSS0030591' => 'camsi', 'CSS0030696' => 'camsi', 'CSS0032653' => 'camsi', 'CSS0037487' => 'camsi', 'CSS0041102' => 'camsi', 'CSS0041261' => 'camsi', 'CSS0046246' => 'camsi', 'CSS0049256' => 'camsi', 'DCAR_004075' => 'dca', 'DCAR_011538' => 'dca', 'DCAR_019553' => 'dca', 'DCAR_020952' => 'dca', 'DCAR_021739' => 'dca', 'DCAR_027407' => 'dca', 'DCAR_027913' => 'dca', 'DCAR_028066' => 'dca', 'Dinv05899' => 'din', 'Dinv07563' => 'din', 'Dinv08010' => 'din', 'Dinv14125' => 'din', 'Dinv20172' => 'din', 'Dinv30743' => 'din', 'Dinv31229' => 'din', 'Dinv34162' => 'din', 'Dinv36028' => 'din', 'Dinv39368' => 'din', 'Dinv40565' => 'din', 'Dinv41706' => 'din', 'Duzib052G0089' => 'dzi', 'Duzib116G0641' => 'dzi', 'Duzib132G0069' => 'dzi', 'Duzib132G1219' => 'dzi', 'Duzib147G0278' => 'dzi', 'Duzib160G0480' => 'dzi', 'Duzib170G0661' => 'dzi', 'Duzib177G0591' => 'dzi', 'Duzib187G1353' => 'dzi', 'Duzib192G0858' => 'dzi', 'Duzib192G0883' => 'dzi', 'Duzib213G0506' => 'dzi', 'Duzib235G0289' => 'dzi', 'Duzib251G0422' => 'dzi', 'ECA232G3898' => 'eca', 'ECA233G5950' => 'eca', 'ECA234G1699' => 'eca', 'ECA234G2421' => 'eca', 'ECA236G0426' => 'eca', 'ECA236G4331' => 'eca', 'ECA248G2573' => 'eca', 'EL10Ac1g00077' => 'bvu', 'EL10Ac1g01746' => 'bvu', 'EL10Ac2g03464' => 'bvu', 'EL10Ac4g08176' => 'bvu', 'EL10Ac7g17521' => 'bvu', 'EL10Ac8g20386' => 'bvu', 'EL10Ac9g21343' => 'bvu', 'EL10Ac9g22688' => 'bvu', 'Eucgr.B03434' => 'egr', 'Eucgr.D00618' => 'egr', 'Eucgr.E02395' => 'egr', 'Eucgr.F01129' => 'egr', 'Eucgr.F02622' => 'egr', 'Eucgr.F04207' => 'egr', 'FAN01G0570' => 'fan', 'FAN03G3351' => 'fan', 'FAN06G3702' => 'fan', 'FAN07G2149' => 'fan', 'FAN10G3758' => 'fan', 'FAN11G1170' => 'fan', 'FAN11G2050' => 'fan', 'FAN11G2724' => 'fan', 'FAN12G1700' => 'fan', 'FAN12G2028' => 'fan', 'FAN15G1160' => 'fan', 'FAN15G3063' => 'fan', 'FAN16G2540' => 'fan', 'FAN16G3077' => 'fan', 'FAN16G3624' => 'fan', 'FAN17G0221' => 'fan', 'FAN20G2492' => 'fan', 'FAN20G2905' => 'fan', 'FAN21G0548' => 'fan', 'FAN21G1300' => 'fan', 'FAN22G0077' => 'fan', 'FAN22G1315' => 'fan', 'FAN24G1280' => 'fan', 'FAN24G1445' => 'fan', 'FAN24G3527' => 'fan', 'FAN25G0464' => 'fan', 'FAN25G2885' => 'fan', 'FAN25G3270' => 'fan', 'FAN27G1101' => 'fan', 'FAN27G2846' => 'fan', 'FAN27G3524' => 'fan', 'FvH4_2g11770' => 'fve', 'FvH4_2g15630' => 'fve', 'FvH4_3g05570' => 'fve', 'FvH4_3g09110' => 'fve', 'FvH4_3g19940' => 'fve', 'FvH4_4g04821' => 'fve', 'FvH4_4g31480' => 'fve', 'FvH4_7g01740' => 'fve', 'Glyma.05G130400' => 'gma', 'Glyma.05G156400' => 'gma', 'Glyma.07G197000' => 'gma', 'Glyma.08G085151' => 'gma', 'Glyma.08G114500' => 'gma', 'Glyma.08G300400' => 'gma', 'Glyma.10G215800' => 'gma', 'Glyma.12G224400' => 'gma', 'Glyma.13G179300' => 'gma', 'Glyma.13G218151' => 'gma', 'Glyma.13G238800' => 'gma', 'Glyma.13G276900' => 'gma', 'Glyma.14G078200' => 'gma', 'Glyma.15G074500' => 'gma', 'Glyma.15G094100' => 'gma', 'Glyma.17G247200' => 'gma', 'Glyma.18G120100' => 'gma', 'Glyma.20G176000' => 'gma', 'Gohir.A01G063600' => 'ghi', 'Gohir.A01G170301' => 'ghi', 'Gohir.A02G060500' => 'ghi', 'Gohir.A05G133850' => 'ghi', 'Gohir.A05G161400' => 'ghi', 'Gohir.A06G012900' => 'ghi', 'Gohir.A06G035901' => 'ghi', 'Gohir.A06G127100' => 'ghi', 'Gohir.A06G210500' => 'ghi', 'Gohir.A08G008650' => 'ghi', 'Gohir.A09G072700' => 'ghi', 'Gohir.A09G088301' => 'ghi', 'Gohir.A10G040600' => 'ghi', 'Gohir.A12G036300' => 'ghi', 'Gohir.A12G143350' => 'ghi', 'Gohir.A12G165500' => 'ghi', 'Gohir.A13G145700' => 'ghi', 'Gohir.D01G050000' => 'ghi', 'Gohir.D01G051366' => 'ghi', 'Gohir.D01G161350' => 'ghi', 'Gohir.D02G065900' => 'ghi', 'Gohir.D05G164200' => 'ghi', 'Gohir.D05G355500' => 'ghi', 'Gohir.D06G010400' => 'ghi', 'Gohir.D06G111250' => 'ghi', 'Gohir.D06G132000' => 'ghi', 'Gohir.D06G210500' => 'ghi', 'Gohir.D07G165675' => 'ghi', 'Gohir.D08G062240' => 'ghi', 'Gohir.D08G086101' => 'ghi', 'Gohir.D08G138060' => 'ghi', 'Gohir.D09G072300' => 'ghi', 'Gohir.D10G041400' => 'ghi', 'Gohir.D11G191020' => 'ghi', 'Gohir.D11G212066' => 'ghi', 'Gohir.D12G036300' => 'ghi', 'Gohir.D12G168600' => 'ghi', 'Gohir.D13G150600' => 'ghi', 'Gorai.001G057300' => 'gra', 'Gorai.002G069900' => 'gra', 'Gorai.002G200000' => 'gra', 'Gorai.003G067600' => 'gra', 'Gorai.005G074800' => 'gra', 'Gorai.006G087300' => 'gra', 'Gorai.008G037500' => 'gra', 'Gorai.008G181400' => 'gra', 'Gorai.009G169400' => 'gra', 'Gorai.009G387900' => 'gra', 'Gorai.010G013300' => 'gra', 'Gorai.010G153800' => 'gra', 'Gorai.010G255800' => 'gra', 'Gorai.011G043700' => 'gra', 'Gorai.011G198900' => 'gra', 'Gorai.013G168400' => 'gra', 'GSVIVG01005212001' => 'vvi', 'GSVIVG01006163001' => 'vvi', 'GSVIVG01009625001' => 'vvi', 'GSVIVG01014338001' => 'vvi', 'GSVIVG01020005001' => 'vvi', 'GSVIVG01021450001' => 'vvi', 'GSVIVG01023975001' => 'vvi', 'GSVIVG01034490001' => 'vvi', 'HanXRQChr04g0112071' => 'han', 'HanXRQChr05g0131151' => 'han', 'HanXRQChr09g0262371' => 'han', 'HanXRQChr09g0268401' => 'han', 'HanXRQChr10g0279241' => 'han', 'HanXRQChr10g0297961' => 'han', 'HanXRQChr11g0326231' => 'han', 'HanXRQChr11g0328471' => 'han', 'HanXRQChr16g0507941' => 'han', 'HanXRQChr17g0560211' => 'han', 'Haze_02108' => 'cav', 'Haze_02428' => 'cav', 'Haze_05593' => 'cav', 'Haze_06448' => 'cav', 'Haze_09427' => 'cav', 'Haze_12022' => 'cav', 'Haze_17612' => 'cav', 'Haze_17928' => 'cav', 'Hma1.2p1_0032F.1_g019250' => 'hma', 'Hma1.2p1_0163F.1_g072690' => 'hma', 'Hma1.2p1_0265F.1_g106710' => 'hma', 'Hma1.2p1_0286F.1_g113970' => 'hma', 'Hma1.2p1_0363F.1_g136640' => 'hma', 'Hma1.2p1_0584F.1_g183470' => 'hma', 'Hma1.2p1_0885F.1_g232570' => 'hma', 'HPP92_006022' => 'vpl', 'HPP92_007320' => 'vpl', 'HPP92_011521' => 'vpl', 'HPP92_019387' => 'vpl', 'HPP92_024038' => 'vpl', 'Hund05891' => 'sun', 'Hund06450' => 'sun', 'Hund12053' => 'sun', 'Hund16800' => 'sun', 'Hund21222' => 'sun', 'Hund22896' => 'sun', 'Hund23746' => 'sun', 'Hund27083' => 'sun', 'Lalb_Chr02g0141831' => 'lal', 'Lalb_Chr02g0141841' => 'lal', 'Lalb_Chr05g0220411' => 'lal', 'Lalb_Chr06g0162081' => 'lal', 'Lalb_Chr09g0327651' => 'lal', 'Lalb_Chr13g0295051' => 'lal', 'Lalb_Chr15g0086801' => 'lal', 'Lalb_Chr16g0383781' => 'lal', 'Lalb_Chr16g0383791' => 'lal', 'Lalb_Chr18g0055441' => 'lal', 'Lalb_Chr18g0059611' => 'lal', 'Lalb_Chr20g0109661' => 'lal', 'Lalb_Chr20g0109831' => 'lal', 'Lalb_Chr20g0121871' => 'lal', 'Lalb_Chr22g0355361' => 'lal', 'Lalb_Chr25g0286371' => 'lal', 'Lj1A1187G43' => 'lonja', 'Lj1A1205T50' => 'lonja', 'Lj1A800G33' => 'lonja', 'Lj1C1187T7' => 'lonja', 'Lj1C843T11' => 'lonja', 'Lj1g0010940' => 'lja', 'Lj2A288T69' => 'lonja', 'Lj3g0024276' => 'lja', 'Lj4A47T76' => 'lonja', 'Lj4g0005805' => 'lja', 'Lj4g0006097' => 'lja', 'Lj4g0008528' => 'lja', 'Lj4g0024907' => 'lja', 'Lj5g0012472' => 'lja', 'Lj5g0018648' => 'lja', 'Lj6C789G1' => 'lonja', 'Lj6g0004000' => 'lja', 'Lj7A292G67' => 'lonja', 'Lj7A292T64' => 'lonja', 'Lj9A400T58' => 'lonja', 'Lsat_1_v5_gn_1_126181' => 'lsa', 'Lsat_1_v5_gn_4_123041' => 'lsa', 'Lsat_1_v5_gn_4_133620' => 'lsa', 'Lsat_1_v5_gn_4_53221' => 'lsa', 'Lsat_1_v5_gn_4_71961' => 'lsa', 'Lsat_1_v5_gn_7_105241' => 'lsa', 'Lsat_1_v5_gn_7_21361' => 'lsa', 'Lsat_1_v5_gn_7_28860' => 'lsa', 'Lsat_1_v5_gn_7_31260' => 'lsa', 'Lsat_1_v5_gn_8_52801' => 'lsa', 'Manes.02G191400' => 'mes', 'Manes.03G110100' => 'mes', 'Manes.04G071100' => 'mes', 'Manes.05G100500' => 'mes', 'Manes.05G164700' => 'mes', 'Manes.15G087000' => 'mes', 'Manes.15G121500' => 'mes', 'Manes.16G028300' => 'mes', 'Manes.17G046100' => 'mes', 'Manes.17G069800' => 'mes', 'Manes.18G100500' => 'mes', 'Mapoly0002s0109' => 'mpo', 'Mapoly0024s0007' => 'mpo', 'Mapoly0089s0032' => 'mpo', 'MBI04_g42241_MAGBIO' => 'mbi', 'MBI05_g11988_MAGBIO' => 'mbi', 'MBI05_g35452_MAGBIO' => 'mbi', 'MBI07_g30179_MAGBIO' => 'mbi', 'MBI07_g35859_MAGBIO' => 'mbi', 'MBI07_g35860_MAGBIO' => 'mbi', 'MBI07_g37166_MAGBIO' => 'mbi', 'MBI08_g18172_MAGBIO' => 'mbi', 'MBI09_g08441_MAGBIO' => 'mbi', 'MBI13_g01676_MAGBIO' => 'mbi', 'MBI14_g42955_MAGBIO' => 'mbi', 'MBI16_g13161_MAGBIO' => 'mbi', 'MBI17_g27204_MAGBIO' => 'mbi', 'MBI19_g21595_MAGBIO' => 'mbi', 'MD00G1148400' => 'mdo', 'MD02G1301200' => 'mdo', 'MD03G1227800' => 'mdo', 'MD05G1041100' => 'mdo', 'MD05G1124800' => 'mdo', 'MD05G1284000' => 'mdo', 'MD05G1338800' => 'mdo', 'MD05G1338900' => 'mdo', 'MD07G1022800' => 'mdo', 'MD10G1047500' => 'mdo', 'MD10G1127500' => 'mdo', 'MD10G1262300' => 'mdo', 'MD10G1293800' => 'mdo', 'MD16G1074300' => 'mdo', 'Medtr1g021670' => 'mtr', 'Medtr1g096320' => 'mtr', 'Medtr2g013690' => 'mtr', 'Medtr2g019450' => 'mtr', 'Medtr2g085170' => 'mtr', 'Medtr4g088785' => 'mtr', 'Medtr8g055930' => 'mtr', 'Medtr8g085850' => 'mtr', 'MELO3C002605.2' => 'cme', 'MELO3C003891.2' => 'cme', 'MELO3C004012.2' => 'cme', 'MELO3C007134.2' => 'cme', 'MELO3C008118.2' => 'cme', 'MELO3C016700.2' => 'cme', 'MELO3C024127.2' => 'cme', 'MELO3C033361.2' => 'cme', 'MELO3C033362.2' => 'cme', 'Migut.C00430' => 'egut', 'Migut.C01246' => 'egut', 'Migut.E00101' => 'egut', 'Migut.H01486' => 'egut', 'Migut.H01939' => 'egut', 'Migut.K00360' => 'egut', 'Migut.M00910' => 'egut', 'Migut.M01139' => 'egut', 'Migut.N02677' => 'egut', 'MSTRG.13252' => 'ama', 'MSTRG.14701' => 'ama', 'MSTRG.1521' => 'ama', 'MSTRG.15884' => 'ama', 'MSTRG.16242' => 'ama', 'MSTRG.22285' => 'ama', 'MSTRG.22444' => 'ama', 'MSTRG.2349' => 'ama', 'MSTRG.26308' => 'ama', 'MSTRG.28296' => 'ama', 'MSTRG.9895' => 'ama', 'Nitab4.5_0000110g0060' => 'nta', 'Nitab4.5_0000420g0130' => 'nta', 'Nitab4.5_0000422g0030' => 'nta', 'Nitab4.5_0000560g0180' => 'nta', 'Nitab4.5_0000703g0100' => 'nta', 'Nitab4.5_0000786g0200' => 'nta', 'Nitab4.5_0001336g0020' => 'nta', 'Nitab4.5_0001796g0030' => 'nta', 'Nitab4.5_0003348g0060' => 'nta', 'Nitab4.5_0003698g0040' => 'nta', 'Nitab4.5_0003942g0090' => 'nta', 'Nitab4.5_0004775g0070' => 'nta', 'Nitab4.5_0004864g0030' => 'nta', 'Nitab4.5_0005615g0020' => 'nta', 'Nitab4.5_0009288g0030' => 'nta', 'Nitab4.5_0009341g0010' => 'nta', 'Nitab4.5_0009535g0010' => 'nta', 'Nn1g03995' => 'nnu', 'Nn1g04100' => 'nnu', 'Nn1g06530' => 'nnu', 'Nn3g16404' => 'nnu', 'Nn3g17212' => 'nnu', 'Nn3g20776' => 'nnu', 'Nn3g21923' => 'nnu', 'Nn5g27737' => 'nnu', 'Nn5g29461' => 'nnu', 'Nn7g38355' => 'nnu', 'Nn8g39873' => 'nnu', 'Oeu000548.2' => 'oeu', 'Oeu004672.1' => 'oeu', 'Oeu015605.2' => 'oeu', 'Oeu016092.1' => 'oeu', 'Oeu017879.3' => 'oeu', 'Oeu024910.1' => 'oeu', 'Oeu028965.1' => 'oeu', 'Oeu031269.1' => 'oeu', 'Oeu031270.1' => 'oeu', 'Oeu032535.1' => 'oeu', 'Oeu034151.1' => 'oeu', 'Oeu034152.1' => 'oeu', 'Oeu034588.2' => 'oeu', 'Oeu050846.1' => 'oeu', 'Oeu050849.2' => 'oeu', 'Oeu051063.2' => 'oeu', 'Oeu052368.1' => 'oeu', 'Oeu052370.1' => 'oeu', 'Os01g0210400' => 'osa', 'Os01g0304300' => 'osa', 'Os01g0749100' => 'osa', 'Os02g0745800' => 'osa', 'Os03g0769050' => 'osa', 'Os05g0531500' => 'osa', 'Os06g0724300' => 'osa', 'Os11g0198100' => 'osa', 'Peaxi162Scf00069g01425' => 'pax', 'Peaxi162Scf00280g00811' => 'pax', 'Peaxi162Scf00310g00615' => 'pax', 'Peaxi162Scf00362g00542' => 'pax', 'Peaxi162Scf00461g00310' => 'pax', 'Peaxi162Scf00530g00118' => 'pax', 'Peaxi162Scf00541g00057' => 'pax', 'Peaxi162Scf00661g00017' => 'pax', 'Peaxi162Scf00926g00027' => 'pax', 'Peaxi162Scf01064g00263' => 'pax', 'Peaxi162Scf01211g00135' => 'pax', 'PGR004G2336' => 'pgr', 'PGR042G0327' => 'pgr', 'PGR042G1957' => 'pgr', 'PGR042G2003' => 'pgr', 'PGR042G3929' => 'pgr', 'PGR083G1137' => 'pgr', 'PGR083G1364' => 'pgr', 'PGSC0003DMG400003381' => 'stu', 'PGSC0003DMG400003417' => 'stu', 'PGSC0003DMG400008981' => 'stu', 'PGSC0003DMG400012417' => 'stu', 'PGSC0003DMG400012823' => 'stu', 'PGSC0003DMG400016885' => 'stu', 'PGSC0003DMG400022812' => 'stu', 'PGSC0003DMG400029726' => 'stu', 'PGSC0003DMG401009243' => 'stu', 'PGSC0003DMG401031505' => 'stu', 'PGSC0003DMG402031505' => 'stu', 'Phvul.001G017600' => 'pvu', 'Phvul.002G193500' => 'pvu', 'Phvul.002G228900' => 'pvu', 'Phvul.002G236800' => 'pvu', 'Phvul.003G049500' => 'pvu', 'Phvul.005G072000' => 'pvu', 'Phvul.006G164800' => 'pvu', 'Phvul.006G185100' => 'pvu', 'Phvul.007G090000' => 'pvu', 'Potri.001G399800' => 'ptr', 'Potri.002G149900' => 'ptr', 'Potri.004G044100' => 'ptr', 'Potri.004G177600' => 'ptr', 'Potri.009G138000' => 'ptr', 'Potri.010G094000' => 'ptr', 'Potri.011G053000' => 'ptr', 'Potri.011G119300' => 'ptr', 'Potri.013G113700' => 'ptr', 'Potri.018G107800' => 'ptr', 'Potri.019G084100' => 'ptr', 'Pp3c14_23720' => 'ppa', 'Pp3c16_6340' => 'ppa', 'Pp3c23_13420' => 'ppa', 'Pp3c24_2740' => 'ppa', 'Pp3c25_860' => 'ppa', 'Pp3c8_21750' => 'ppa', 'Prupe.1G273000' => 'ppe', 'Prupe.1G273700' => 'ppe', 'Prupe.1G274100' => 'ppe', 'Prupe.2G023300' => 'ppe', 'Prupe.4G048000' => 'ppe', 'Prupe.4G080400' => 'ppe', 'Prupe.4G181200' => 'ppe', 'Prupe.8G056900' => 'ppe', 'Prupe.8G168700' => 'ppe', 'Psat1g189080' => 'psa', 'Psat1g204760' => 'psa', 'Psat4g175560' => 'psa', 'Psat4g177720' => 'psa', 'Psat5g244240' => 'psa', 'Psat6g010720' => 'psa', 'Psat6g187200' => 'psa', 'Psat7g072040' => 'psa', 'PSO017G3501' => 'pso', 'PSO063G2148' => 'pso', 'PSO063G5608' => 'pso', 'PSO210G6392' => 'pso', 'PSO541G2319' => 'pso', 'PSO541G2836' => 'pso', 'PSO541G4012' => 'pso', 'PSO541G6253' => 'pso', 'PSO675G0580' => 'pso', 'PSO675G0856' => 'pso', 'PSO675G5635' => 'pso', 'PSO675G9157' => 'pso', 'PSO832G1660' => 'pso', 'PSO832G1969' => 'pso', 'QL02p007186' => 'qlo', 'QL02p033904' => 'qlo', 'QL03p064391' => 'qlo', 'QL05p040593' => 'qlo', 'QL05p058242' => 'qlo', 'QL08p021825' => 'qlo', 'QL11p004981' => 'qlo', 'RcHm_v2.0_Chr1g0318301' => 'rch', 'RcHm_v2.0_Chr4g0418501' => 'rch', 'RcHm_v2.0_Chr4g0439971' => 'rch', 'RcHm_v2.0_Chr5g0008541' => 'rch', 'RcHm_v2.0_Chr5g0014101' => 'rch', 'RcHm_v2.0_Chr5g0014131' => 'rch', 'RcHm_v2.0_Chr5g0033621' => 'rch', 'RcHm_v2.0_Chr6g0272041' => 'rch', 'RcHm_v2.0_Chr6g0278831' => 'rch', 'Rhsim02G0130400' => 'rsi', 'Rhsim02G0171100' => 'rsi', 'Rhsim05G0053000' => 'rsi', 'Rhsim05G0053100' => 'rsi', 'Rhsim06G0096500' => 'rsi', 'Rhsim06G0096600' => 'rsi', 'Rhsim06G0199100' => 'rsi', 'Rhsim12G0062300' => 'rsi', 'Rhsim12G0062800' => 'rsi', 'Sabra02G0118600' => 'sbr', 'Sabra04G0027300' => 'sbr', 'Sabra04G0119500' => 'sbr', 'Sabra08G0112500' => 'sbr', 'Sabra11G0036800' => 'sbr', 'Sabra11G0103800' => 'sbr', 'Sabra13G0096300' => 'sbr', 'Sabra16G0262300' => 'sbr', 'Sabra18G0091700' => 'sbr', 'Sabra19G0095400' => 'sbr', 'SalBow6G3080' => 'sbo', 'SalBow7G1157' => 'sbo', 'SalBow7G2123' => 'sbo', 'SalBow7G2285' => 'sbo', 'SalBow7G3537' => 'sbo', 'SalBow8G2947' => 'sbo', 'SalBow8G4463' => 'sbo', 'SalBow8G5466' => 'sbo', 'Sc01g0001750' => 'sci', 'Sc02g0006640' => 'sci', 'Sc02g0006670' => 'sci', 'Sc04g0008220' => 'sci', 'Sc05g0006190' => 'sci', 'Sc08g0002760' => 'sci', 'Sc17g0006170' => 'sci', 'Sc22g0002050' => 'sci', 'Sc23g0001190' => 'sci', 'Sc24g0000980' => 'sci', 'Sed0006245' => 'sed', 'Sed0007543' => 'sed', 'Sed0009411' => 'sed', 'Sed0010765' => 'sed', 'Sed0012944' => 'sed', 'Sed0014682' => 'sed', 'Sed0016174' => 'sed', 'Sed0016796' => 'sed', 'Sed0020317' => 'sed', 'Sed0021467' => 'sed', 'SEGI_01316' => 'sgi', 'SEGI_03374' => 'sgi', 'SEGI_16265' => 'sgi', 'SEGI_18569' => 'sgi', 'SEGI_20351' => 'sgi', 'SEGI_26395' => 'sgi', 'SEGI_29469' => 'sgi', 'SEGI_34771' => 'sgi', 'SEGI_36769' => 'sgi', 'SEGI_37139' => 'sgi', 'SGA_v2.0_scaffold100G29687' => 'sas', 'SGA_v2.0_scaffold118G32472' => 'sas', 'SGA_v2.0_scaffold14G07051' => 'sas', 'SGA_v2.0_scaffold183G39845' => 'sas', 'SGA_v2.0_scaffold1G00174' => 'sas', 'SGA_v2.0_scaffold22G09714' => 'sas', 'SGA_v2.0_scaffold333G48992' => 'sas', 'SGA_v2.0_scaffold46G17491' => 'sas', 'SGA_v2.0_scaffold49G18294' => 'sas', 'SGA_v2.0_scaffold63G21658' => 'sas', 'SHI01741' => 'shi', 'SHI05771' => 'shi', 'SHI18077' => 'shi', 'SHI20525' => 'shi', 'SHI20527' => 'shi', 'SHI20528' => 'shi', 'SMO172G0185' => 'smo', 'SMO198G0020' => 'smo', 'SMO351G0006' => 'smo', 'SMO356G0118' => 'smo', 'SMO358G0296' => 'smo', 'SMO367G0079' => 'smo', 'SMO367G1277' => 'smo', 'Solyc01g014220.3' => 'sly', 'Solyc01g111770.2' => 'sly', 'Solyc02g078180.3' => 'sly', 'Solyc03g006430.3' => 'sly', 'Solyc03g006456.1' => 'sly', 'Solyc03g079860.2' => 'sly', 'Solyc04g079770.3' => 'sly', 'Solyc05g007430.4' => 'sly', 'Solyc07g063150.3' => 'sly', 'Solyc08g016620.3' => 'sly', 'Solyc09g057590.3' => 'sly', 'Solyc09g057600.1' => 'sly', 'Solyc10g009050.3' => 'sly', 'Solyc11g017420.2' => 'sly', 'Sopen01g053810' => 'spe', 'Sopen02g023040' => 'spe', 'Sopen03g002440' => 'spe', 'Sopen04g033350' => 'spe', 'Sopen05g003310' => 'spe', 'Sopen07g004050' => 'spe', 'Sopen07g031340' => 'spe', 'Sopen08g006990' => 'spe', 'Sopen10g004830' => 'spe', 'Sopen11g009370' => 'spe', 'Sp1g24450' => 'spa', 'Sp1g29670' => 'spa', 'Sp1g39600' => 'spa', 'Sp2g11080' => 'spa', 'Sp2g13970' => 'spa', 'Sp4g16130' => 'spa', 'Sp6g13080' => 'spa', 'Sp7g37270' => 'spa', 'TAR371G0065' => 'tar', 'TAR376G0340' => 'tar', 'TAR376G0435' => 'tar', 'TAR381G0002' => 'tar', 'TAR381G1236' => 'tar', 'TAR624G0055' => 'tar', 'TAR624G0324' => 'tar', 'TAR624G0696' => 'tar', 'TAR624G0906' => 'tar', 'TAR625G0107' => 'tar', 'TAR626G0015' => 'tar', 'TAR626G1356' => 'tar', 'TAR627G0888' => 'tar', 'TAR628G0399' => 'tar', 'TAR628G1327' => 'tar', 'TAR629G2831' => 'tar', 'TAR629G2874' => 'tar', 'TAR633G1432' => 'tar', 'TAR633G2771' => 'tar', 'THA.LOC104803394' => 'tha', 'THA.LOC104805153' => 'tha', 'THA.LOC104806784' => 'tha', 'THA.LOC104810473' => 'tha', 'THA.LOC104813100' => 'tha', 'THA.LOC104814215' => 'tha', 'THA.LOC104815554' => 'tha', 'THA.LOC104820544' => 'tha', 'THA.LOC104824754' => 'tha', 'THA.LOC104827717' => 'tha', 'Thecc.02G031400' => 'tca', 'Thecc.02G055900' => 'tca', 'Thecc.02G350800' => 'tca', 'Thecc.06G150900' => 'tca', 'Thecc.06G186600' => 'tca', 'Thecc.07G089600' => 'tca', 'Thecc.08G020400' => 'tca', 'Thecc.08G182100' => 'tca', 'Thhalv10000873m.g' => 'esa', 'Thhalv10004185m.g' => 'esa', 'Thhalv10006981m.g' => 'esa', 'Thhalv10007204m.g' => 'esa', 'Thhalv10011374m.g' => 'esa', 'Thhalv10013482m.g' => 'esa', 'Thhalv10017801m.g' => 'esa', 'Thhalv10024983m.g' => 'esa', 'TPR.G12072' => 'tpr', 'TPR.G15769' => 'tpr', 'TPR.G16504' => 'tpr', 'TPR.G16506' => 'tpr', 'TPR.G24345' => 'tpr', 'TPR.G26666' => 'tpr', 'TPR.G27320' => 'tpr', 'TPR.G31819' => 'tpr', 'TPR.G38879' => 'tpr', 'TPR.G39015' => 'tpr', 'TPR.G8819' => 'tpr', 'TWI09G0924' => 'twi', 'TWI12G0811' => 'twi', 'TWI12G1294' => 'twi', 'TWI31G0150' => 'twi', 'TWI36G1262' => 'twi', 'TWI38G1287' => 'twi', 'TWI38G1633' => 'twi', 'TWI38G1982' => 'twi', 'TWI39G0116' => 'twi', 'TWI60G1011' => 'twi', 'TWI63G0171' => 'twi', 'TWI73G0839' => 'twi', 'TWI79G1511' => 'twi', 'unitig_0.g915' => 'ugi', 'unitig_0.g916' => 'ugi', 'unitig_21.g20219' => 'ugi', 'unitig_21.g20416' => 'ugi', 'unitig_578.g16132' => 'ugi', 'unitig_578.g16718' => 'ugi', 'unitig_62.g23481' => 'ugi', 'unitig_744.g24535' => 'ugi', 'unitig_749.g13525' => 'ugi', 'vmacro01248' => 'vma', 'vmacro02290' => 'vma', 'vmacro10946' => 'vma', 'vmacro11865' => 'vma', 'vmacro12493' => 'vma', 'vmacro17322' => 'vma', 'vmacro21599' => 'vma', 'vmacro23041' => 'vma', 'VMungo0251G0004' => 'vmu', 'VMungo0251G2639' => 'vmu', 'VMungo0251G2967' => 'vmu', 'VMungo0540G0864' => 'vmu', 'VMungo0540G1569' => 'vmu', 'VMungo0647G0317' => 'vmu', 'VMungo0720G1373' => 'vmu', 'VMungo0720G1508' => 'vmu', 'VMungo1080G0485' => 'vmu', 'VMungo1215G3177' => 'vmu', 'Zm00001eb112600' => 'zma', 'Zm00001eb120220' => 'zma', 'Zm00001eb153240' => 'zma', 'Zm00001eb168880' => 'zma', 'Zm00001eb213920' => 'zma', 'Zm00001eb228280' => 'zma', 'Zm00001eb254580' => 'zma', 'Zm00001eb272180' => 'zma', 'Zm00001eb293190' => 'zma', 'Zm00001eb322930' => 'zma', 'Zm00001eb353360' => 'zma', 'Zm00001eb353390' => 'zma', 'Zm00001eb353430' => 'zma', 'Zm00001eb353440' => 'zma', 'Zm00001eb353780' => 'zma' ), 'gf_id' => 'HOM05D000499', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000499' ), 'data_identifier' => 'HOM05D000499', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000499', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1066', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p29780' => 'bna', 'A02p33180' => 'bna', 'A03p16470' => 'bna', 'A03p66010' => 'bna', 'A04p25970' => 'bna', 'A06p01270' => 'bna', 'A06p46080' => 'bna', 'A07p11400' => 'bna', 'A08p01840' => 'bna', 'A08p08230' => 'bna', 'A08p25740' => 'bna', 'A09p32070' => 'bna', 'A09p37830' => 'bna', 'A09p42840' => 'bna', 'A09p42850' => 'bna', 'Aa31LG10G2060' => 'aar', 'Aa31LG2G7410' => 'aar', 'Aa31LG6G10200' => 'aar', 'Aa31LG6G16680' => 'aar', 'Aa31LG6G8470' => 'aar', 'Aa31LG9G12730' => 'aar', 'Aa31LG9G13680' => 'aar', 'Aa31LG9G14920' => 'aar', 'Aa31LG9G6650' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4977' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5467' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3254' => 'aag', 'Actinidia02578' => 'ach', 'Actinidia07693' => 'ach', 'Actinidia08413' => 'ach', 'Actinidia08414' => 'ach', 'Actinidia15289' => 'ach', 'Actinidia19871' => 'ach', 'Actinidia21475' => 'ach', 'Actinidia22576' => 'ach', 'Actinidia28327' => 'ach', 'Actinidia32491' => 'ach', 'Actinidia39463' => 'ach', 'Actinidia39571' => 'ach', 'Ah.01g013750' => 'amhyb', 'Ah.01g023210' => 'amhyb', 'Ah.04g164850' => 'amhyb', 'Ah.05g178060' => 'amhyb', 'Ah.07g204270' => 'amhyb', 'Ah.07g208480' => 'amhyb', 'Ah.09g237410' => 'amhyb', 'Ah.14g089460' => 'amhyb', 'AL1G41790' => 'aly', 'AL1G49050' => 'aly', 'AL1G53810' => 'aly', 'AL1G61400' => 'aly', 'AL4G18580' => 'aly', 'AL5G12510' => 'aly', 'AL5G12540' => 'aly', 'AL6G43230' => 'aly', 'AL7G10370' => 'aly', 'AL7G19250' => 'aly', 'AL8G12240' => 'aly', 'AL8G18540' => 'aly', 'Aqoxy1G02409' => 'aox', 'Aqoxy2G03993' => 'aox', 'Aqoxy3G03357' => 'aox', 'Aqoxy4G00785' => 'aox', 'Aqoxy5G02598' => 'aox', 'Aqoxy6G00132' => 'aox', 'Aqoxy7G01776' => 'aox', 'Aqoxy7G02316' => 'aox', 'Aqoxy7G03973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.12AFKW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B8730' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27IQR1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3F75VG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3RE0GA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41TCQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.527VTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FIR39' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5W8UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DA38EV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ63HS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H1I32C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HC27T5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4M8AP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7N3CZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9UVDZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LS1NQA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT1D4B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SKC4TM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCFV76' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF9Q1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQWD9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1ZM88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WE07RT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YCK7VH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJE6Q6' => 'arhy', 'AT1G28240' => 'ath', 'AT1G34550' => 'ath', 'AT1G53040' => 'ath', 'AT2G02910' => 'ath', 'AT4G09630' => 'ath', 'AT4G38500' => 'ath', 'AT5G42660' => 'ath', 'AT5G46220' => 'ath', 'ATR0152G026' => 'atr', 'ATR0564G343' => 'atr', 'ATR0706G151' => 'atr', 'ATR0733G207' => 'atr', 'ATR0751G234' => 'atr', 'ATR0807G048' => 'atr', 'ATR1091G084' => 'atr', 'Atru.chr10.1229' => 'acertr', 'Atru.chr10.1230' => 'acertr', 'Atru.chr10.1874' => 'acertr', 'Atru.chr11.1808' => 'acertr', 'Atru.chr13.1795' => 'acertr', 'Atru.chr13.570' => 'acertr', 'Atru.chr2.2608' => 'acertr', 'Atru.chr2.2609' => 'acertr', 'Atru.chr5.3428' => 'acertr', 'Atru.chr8.1171' => 'acertr', 'AUR62004651' => 'cqu', 'AUR62008675' => 'cqu', 'AUR62010014' => 'cqu', 'AUR62013004' => 'cqu', 'AUR62014825' => 'cqu', 'AUR62015015' => 'cqu', 'AUR62015151' => 'cqu', 'AUR62017020' => 'cqu', 'AUR62019422' => 'cqu', 'AUR62023570' => 'cqu', 'AUR62025571' => 'cqu', 'AUR62029098' => 'cqu', 'AUR62033863' => 'cqu', 'AUR62034296' => 'cqu', 'AUR62040075' => 'cqu', 'BcaB02g07334' => 'bca', 'BcaB02g10575' => 'bca', 'BcaB03g12119' => 'bca', 'BcaB03g12120' => 'bca', 'BcaB03g13945' => 'bca', 'BcaB04g17123' => 'bca', 'BcaB04g17867' => 'bca', 'BcaB04g19839' => 'bca', 'BcaB07g30317' => 'bca', 'BcaB07g32432' => 'bca', 'BcaB07g33362' => 'bca', 'BcaB08g36611' => 'bca', 'BcaC01g00028' => 'bca', 'BcaC01g01356' => 'bca', 'BcaC01g02034' => 'bca', 'BcaC01g06051' => 'bca', 'BcaC03g16839' => 'bca', 'BcaC03g17176' => 'bca', 'BcaC05g26829' => 'bca', 'BcaC06g31490' => 'bca', 'BcaC06g35344' => 'bca', 'BcaC06g36570' => 'bca', 'BcaC07g37537' => 'bca', 'BcaC08g43491' => 'bca', 'BcaC08g43773' => 'bca', 'BcaNung00234' => 'bca', 'BcaNung01982' => 'bca', 'BcaNung03707' => 'bca', 'BcaNung06454' => 'bca', 'BolC2t10762H' => 'bol', 'BolC2t11191H' => 'bol', 'BolC3t14322H' => 'bol', 'BolC3t19747H' => 'bol', 'BolC3t21425H' => 'bol', 'BolC4t27800H' => 'bol', 'BolC5t31423H' => 'bol', 'BolC6t35951H' => 'bol', 'BolC6t36282H' => 'bol', 'BolC7t40678H' => 'bol', 'BolC7t40679H' => 'bol', 'BolC7t42222H' => 'bol', 'BolC7t43492H' => 'bol', 'BolC7t46785H' => 'bol', 'BolC8t47853H' => 'bol', 'BolC9t56805H' => 'bol', 'BraA02t08000Z' => 'bra', 'BraA02t08341Z' => 'bra', 'BraA03t10936Z' => 'bra', 'BraA03t15657Z' => 'bra', 'BraA04t18100Z' => 'bra', 'BraA05t20523Z' => 'bra', 'BraA06t23353Z' => 'bra', 'BraA06t27473Z' => 'bra', 'BraA06t27769Z' => 'bra', 'BraA07t28928Z' => 'bra', 'BraA08t32236Z' => 'bra', 'BraA08t32841Z' => 'bra', 'BraA08t34524Z' => 'bra', 'BraA09t38742Z' => 'bra', 'BraA09t39295Z' => 'bra', 'C02p47180' => 'bna', 'C02p50990' => 'bna', 'C03p19360' => 'bna', 'C03p74950' => 'bna', 'C03p91000' => 'bna', 'C04p63260' => 'bna', 'C05p27050' => 'bna', 'C06p08750' => 'bna', 'C06p11490' => 'bna', 'C07p02820' => 'bna', 'C07p17180' => 'bna', 'C07p29440' => 'bna', 'C07p63730' => 'bna', 'C09p39260' => 'bna', 'CAN.G1164.34' => 'can', 'CAN.G1164.39' => 'can', 'CAN.G1530.3' => 'can', 'CAN.G162.61' => 'can', 'CAN.G176.6' => 'can', 'CAN.G289.49' => 'can', 'CAN.G370.21' => 'can', 'CAN.G370.22' => 'can', 'CAN.G371.117' => 'can', 'CAN.G58.37' => 'can', 'CAN.G588.98' => 'can', 'CANSAT21G2266' => 'cansat', 'CANSAT25G2799' => 'cansat', 'CANSAT35G0862' => 'cansat', 'CANSAT35G1704' => 'cansat', 'CANSAT35G1760' => 'cansat', 'CANSAT56G3971' => 'cansat', 'CANSAT56G4116' => 'cansat', 'CANSAT80G1259' => 'cansat', 'CARHR027730' => 'chi', 'CARHR033880' => 'chi', 'CARHR043270' => 'chi', 'CARHR145330' => 'chi', 'CARHR145340' => 'chi', 'CARHR175570' => 'chi', 'CARHR181570' => 'chi', 'CARHR258470' => 'chi', 'CARHR260490' => 'chi', 'CARHR294220' => 'chi', 'Carub.0001s2668' => 'cru', 'Carub.0001s3257' => 'cru', 'Carub.0001s4220' => 'cru', 'Carub.0005s0179' => 'cru', 'Carub.0006s2807' => 'cru', 'Carub.0007s0039' => 'cru', 'Carub.0008s0169' => 'cru', 'Carub.0008s0636' => 'cru', 'Ca_00338_v3' => 'car', 'Ca_00542_v3' => 'car', 'Ca_01844_v3' => 'car', 'Ca_10611_v3' => 'car', 'Ca_13326_v3' => 'car', 'Ca_17944_v3' => 'car', 'Ca_18546_v3' => 'car', 'Ca_24219_v3' => 'car', 'Ca_29972_v3' => 'car', 'CBR_g3681' => 'cbr', 'CBR_g40021' => 'cbr', 'Cc01_g08140' => 'ccan', 'Cc02_g13410' => 'ccan', 'Cc02_g37480' => 'ccan', 'Cc05_g12030' => 'ccan', 'Cc09_g03370' => 'ccan', 'Cc09_g10300' => 'ccan', 'Cc10_g03530' => 'ccan', 'Cc10_g11380' => 'ccan', 'CDE01G0176' => 'cde', 'CDE02G0675' => 'cde', 'CDE02G0942' => 'cde', 'CDE02G1153' => 'cde', 'CDE02G4177' => 'cde', 'CDE04G2117' => 'cde', 'CDE04G2736' => 'cde', 'CDE08G1161' => 'cde', 'CDE09G1238' => 'cde', 'Cfa000467' => 'cfa', 'Cfa000947' => 'cfa', 'Cfa004969' => 'cfa', 'Cfa005284' => 'cfa', 'Cfa008993' => 'cfa', 'Cfa018187' => 'cfa', 'Cfa018454' => 'cfa', 'Cfa020585' => 'cfa', 'Ciclev10000424m.g' => 'ccl', 'Ciclev10003605m.g' => 'ccl', 'Ciclev10007828m.g' => 'ccl', 'Ciclev10014620m.g' => 'ccl', 'Ciclev10015169m.g' => 'ccl', 'Ciclev10018291m.g' => 'ccl', 'Ciclev10028256m.g' => 'ccl', 'Ciclev10033822m.g' => 'ccl', 'CiPaw.05G060300' => 'cil', 'CiPaw.05G085000' => 'cil', 'CiPaw.06G083700' => 'cil', 'CiPaw.06G120300' => 'cil', 'CiPaw.09G060500' => 'cil', 'CiPaw.09G123800' => 'cil', 'CiPaw.11G169700' => 'cil', 'CiPaw.12G118300' => 'cil', 'CiPaw.15G071000' => 'cil', 'CiPaw.15G081900' => 'cil', 'ClCG01G024610' => 'cla', 'ClCG03G006070' => 'cla', 'ClCG05G019250' => 'cla', 'ClCG09G009500' => 'cla', 'ClCG11G008200' => 'cla', 'ClCG11G018080' => 'cla', 'COL.COLO4_17373' => 'col', 'COL.COLO4_22994' => 'col', 'COL.COLO4_26389' => 'col', 'COL.COLO4_27170' => 'col', 'COL.COLO4_31074' => 'col', 'COL.COLO4_31465' => 'col', 'COL.COLO4_36438' => 'col', 'COL.COLO4_36439' => 'col', 'Cpa.g.c38781' => 'cpa', 'Cpa.g.sc128.12' => 'cpa', 'Cpa.g.sc166.7' => 'cpa', 'Cpa.g.sc166.8' => 'cpa', 'Cpa.g.sc20.111' => 'cpa', 'Cpa.g.sc27.31' => 'cpa', 'Cpa.g.sc64.36' => 'cpa', 'Cpa.g.sc64.37' => 'cpa', 'Cpa.g.sc66.49' => 'cpa', 'Cpa.g.sc80.64' => 'cpa', 'CsaV3_1G012320' => 'csa', 'CsaV3_2G008480' => 'csa', 'CsaV3_2G033450' => 'csa', 'CsaV3_3G044830' => 'csa', 'CsaV3_4G033710' => 'csa', 'CsaV3_6G051730' => 'csa', 'CsaV3_7G025350' => 'csa', 'CSS0001067' => 'camsi', 'CSS0005996' => 'camsi', 'CSS0006590' => 'camsi', 'CSS0009673' => 'camsi', 'CSS0010201' => 'camsi', 'CSS0010549' => 'camsi', 'CSS0011364' => 'camsi', 'CSS0014473' => 'camsi', 'CSS0014961' => 'camsi', 'CSS0020191' => 'camsi', 'CSS0021165' => 'camsi', 'CSS0022306' => 'camsi', 'CSS0030591' => 'camsi', 'CSS0030696' => 'camsi', 'CSS0032653' => 'camsi', 'CSS0037487' => 'camsi', 'CSS0041102' => 'camsi', 'CSS0041261' => 'camsi', 'CSS0046246' => 'camsi', 'CSS0049256' => 'camsi', 'DCAR_004075' => 'dca', 'DCAR_011538' => 'dca', 'DCAR_019553' => 'dca', 'DCAR_020952' => 'dca', 'DCAR_021739' => 'dca', 'DCAR_027407' => 'dca', 'DCAR_027913' => 'dca', 'DCAR_028066' => 'dca', 'Dinv05899' => 'din', 'Dinv07563' => 'din', 'Dinv08010' => 'din', 'Dinv14125' => 'din', 'Dinv20172' => 'din', 'Dinv30743' => 'din', 'Dinv31229' => 'din', 'Dinv34162' => 'din', 'Dinv36028' => 'din', 'Dinv39368' => 'din', 'Dinv40565' => 'din', 'Dinv41706' => 'din', 'Duzib052G0089' => 'dzi', 'Duzib116G0641' => 'dzi', 'Duzib132G0069' => 'dzi', 'Duzib132G1219' => 'dzi', 'Duzib147G0278' => 'dzi', 'Duzib160G0480' => 'dzi', 'Duzib170G0661' => 'dzi', 'Duzib177G0591' => 'dzi', 'Duzib187G1353' => 'dzi', 'Duzib192G0858' => 'dzi', 'Duzib192G0883' => 'dzi', 'Duzib213G0506' => 'dzi', 'Duzib235G0289' => 'dzi', 'Duzib251G0422' => 'dzi', 'ECA232G3898' => 'eca', 'ECA233G5950' => 'eca', 'ECA234G1699' => 'eca', 'ECA234G2421' => 'eca', 'ECA236G0426' => 'eca', 'ECA236G4331' => 'eca', 'ECA248G2573' => 'eca', 'EL10Ac1g00077' => 'bvu', 'EL10Ac1g01746' => 'bvu', 'EL10Ac2g03464' => 'bvu', 'EL10Ac4g08176' => 'bvu', 'EL10Ac7g17521' => 'bvu', 'EL10Ac8g20386' => 'bvu', 'EL10Ac9g21343' => 'bvu', 'EL10Ac9g22688' => 'bvu', 'Eucgr.B03434' => 'egr', 'Eucgr.D00618' => 'egr', 'Eucgr.E02395' => 'egr', 'Eucgr.F01129' => 'egr', 'Eucgr.F02622' => 'egr', 'Eucgr.F04207' => 'egr', 'FAN01G0570' => 'fan', 'FAN03G3351' => 'fan', 'FAN06G3702' => 'fan', 'FAN07G2149' => 'fan', 'FAN10G3758' => 'fan', 'FAN11G1170' => 'fan', 'FAN11G2050' => 'fan', 'FAN11G2724' => 'fan', 'FAN12G1700' => 'fan', 'FAN12G2028' => 'fan', 'FAN15G1160' => 'fan', 'FAN15G3063' => 'fan', 'FAN16G2540' => 'fan', 'FAN16G3077' => 'fan', 'FAN16G3624' => 'fan', 'FAN17G0221' => 'fan', 'FAN20G2492' => 'fan', 'FAN20G2905' => 'fan', 'FAN21G0548' => 'fan', 'FAN21G1300' => 'fan', 'FAN22G0077' => 'fan', 'FAN22G1315' => 'fan', 'FAN24G1280' => 'fan', 'FAN24G1445' => 'fan', 'FAN24G3527' => 'fan', 'FAN25G0464' => 'fan', 'FAN25G2885' => 'fan', 'FAN25G3270' => 'fan', 'FAN27G1101' => 'fan', 'FAN27G2846' => 'fan', 'FAN27G3524' => 'fan', 'FvH4_2g11770' => 'fve', 'FvH4_2g15630' => 'fve', 'FvH4_3g05570' => 'fve', 'FvH4_3g09110' => 'fve', 'FvH4_3g19940' => 'fve', 'FvH4_4g04821' => 'fve', 'FvH4_4g31480' => 'fve', 'FvH4_7g01740' => 'fve', 'Glyma.05G130400' => 'gma', 'Glyma.05G156400' => 'gma', 'Glyma.07G197000' => 'gma', 'Glyma.08G085151' => 'gma', 'Glyma.08G114500' => 'gma', 'Glyma.08G300400' => 'gma', 'Glyma.10G215800' => 'gma', 'Glyma.12G224400' => 'gma', 'Glyma.13G179300' => 'gma', 'Glyma.13G218151' => 'gma', 'Glyma.13G238800' => 'gma', 'Glyma.13G276900' => 'gma', 'Glyma.14G078200' => 'gma', 'Glyma.15G074500' => 'gma', 'Glyma.15G094100' => 'gma', 'Glyma.17G247200' => 'gma', 'Glyma.18G120100' => 'gma', 'Glyma.20G176000' => 'gma', 'Gohir.A01G063600' => 'ghi', 'Gohir.A01G170301' => 'ghi', 'Gohir.A02G060500' => 'ghi', 'Gohir.A05G133850' => 'ghi', 'Gohir.A05G161400' => 'ghi', 'Gohir.A06G012900' => 'ghi', 'Gohir.A06G035901' => 'ghi', 'Gohir.A06G127100' => 'ghi', 'Gohir.A06G210500' => 'ghi', 'Gohir.A08G008650' => 'ghi', 'Gohir.A09G072700' => 'ghi', 'Gohir.A09G088301' => 'ghi', 'Gohir.A10G040600' => 'ghi', 'Gohir.A12G036300' => 'ghi', 'Gohir.A12G143350' => 'ghi', 'Gohir.A12G165500' => 'ghi', 'Gohir.A13G145700' => 'ghi', 'Gohir.D01G050000' => 'ghi', 'Gohir.D01G051366' => 'ghi', 'Gohir.D01G161350' => 'ghi', 'Gohir.D02G065900' => 'ghi', 'Gohir.D05G164200' => 'ghi', 'Gohir.D05G355500' => 'ghi', 'Gohir.D06G010400' => 'ghi', 'Gohir.D06G111250' => 'ghi', 'Gohir.D06G132000' => 'ghi', 'Gohir.D06G210500' => 'ghi', 'Gohir.D07G165675' => 'ghi', 'Gohir.D08G062240' => 'ghi', 'Gohir.D08G086101' => 'ghi', 'Gohir.D08G138060' => 'ghi', 'Gohir.D09G072300' => 'ghi', 'Gohir.D10G041400' => 'ghi', 'Gohir.D11G191020' => 'ghi', 'Gohir.D11G212066' => 'ghi', 'Gohir.D12G036300' => 'ghi', 'Gohir.D12G168600' => 'ghi', 'Gohir.D13G150600' => 'ghi', 'Gorai.001G057300' => 'gra', 'Gorai.002G069900' => 'gra', 'Gorai.002G200000' => 'gra', 'Gorai.003G067600' => 'gra', 'Gorai.005G074800' => 'gra', 'Gorai.006G087300' => 'gra', 'Gorai.008G037500' => 'gra', 'Gorai.008G181400' => 'gra', 'Gorai.009G169400' => 'gra', 'Gorai.009G387900' => 'gra', 'Gorai.010G013300' => 'gra', 'Gorai.010G153800' => 'gra', 'Gorai.010G255800' => 'gra', 'Gorai.011G043700' => 'gra', 'Gorai.011G198900' => 'gra', 'Gorai.013G168400' => 'gra', 'GSVIVG01005212001' => 'vvi', 'GSVIVG01006163001' => 'vvi', 'GSVIVG01009625001' => 'vvi', 'GSVIVG01014338001' => 'vvi', 'GSVIVG01020005001' => 'vvi', 'GSVIVG01021450001' => 'vvi', 'GSVIVG01023975001' => 'vvi', 'GSVIVG01034490001' => 'vvi', 'HanXRQChr04g0112071' => 'han', 'HanXRQChr05g0131151' => 'han', 'HanXRQChr09g0262371' => 'han', 'HanXRQChr09g0268401' => 'han', 'HanXRQChr10g0279241' => 'han', 'HanXRQChr10g0297961' => 'han', 'HanXRQChr11g0326231' => 'han', 'HanXRQChr11g0328471' => 'han', 'HanXRQChr16g0507941' => 'han', 'HanXRQChr17g0560211' => 'han', 'Haze_02108' => 'cav', 'Haze_02428' => 'cav', 'Haze_05593' => 'cav', 'Haze_06448' => 'cav', 'Haze_09427' => 'cav', 'Haze_12022' => 'cav', 'Haze_17612' => 'cav', 'Haze_17928' => 'cav', 'Hma1.2p1_0032F.1_g019250' => 'hma', 'Hma1.2p1_0163F.1_g072690' => 'hma', 'Hma1.2p1_0265F.1_g106710' => 'hma', 'Hma1.2p1_0286F.1_g113970' => 'hma', 'Hma1.2p1_0363F.1_g136640' => 'hma', 'Hma1.2p1_0584F.1_g183470' => 'hma', 'Hma1.2p1_0885F.1_g232570' => 'hma', 'HPP92_006022' => 'vpl', 'HPP92_007320' => 'vpl', 'HPP92_011521' => 'vpl', 'HPP92_019387' => 'vpl', 'HPP92_024038' => 'vpl', 'Hund05891' => 'sun', 'Hund06450' => 'sun', 'Hund12053' => 'sun', 'Hund16800' => 'sun', 'Hund21222' => 'sun', 'Hund22896' => 'sun', 'Hund23746' => 'sun', 'Hund27083' => 'sun', 'Lalb_Chr02g0141831' => 'lal', 'Lalb_Chr02g0141841' => 'lal', 'Lalb_Chr05g0220411' => 'lal', 'Lalb_Chr06g0162081' => 'lal', 'Lalb_Chr09g0327651' => 'lal', 'Lalb_Chr13g0295051' => 'lal', 'Lalb_Chr15g0086801' => 'lal', 'Lalb_Chr16g0383781' => 'lal', 'Lalb_Chr16g0383791' => 'lal', 'Lalb_Chr18g0055441' => 'lal', 'Lalb_Chr18g0059611' => 'lal', 'Lalb_Chr20g0109661' => 'lal', 'Lalb_Chr20g0109831' => 'lal', 'Lalb_Chr20g0121871' => 'lal', 'Lalb_Chr22g0355361' => 'lal', 'Lalb_Chr25g0286371' => 'lal', 'Lj1A1187G43' => 'lonja', 'Lj1A1205T50' => 'lonja', 'Lj1A800G33' => 'lonja', 'Lj1C1187T7' => 'lonja', 'Lj1C843T11' => 'lonja', 'Lj1g0010940' => 'lja', 'Lj2A288T69' => 'lonja', 'Lj3g0024276' => 'lja', 'Lj4A47T76' => 'lonja', 'Lj4g0005805' => 'lja', 'Lj4g0006097' => 'lja', 'Lj4g0008528' => 'lja', 'Lj4g0024907' => 'lja', 'Lj5g0012472' => 'lja', 'Lj5g0018648' => 'lja', 'Lj6C789G1' => 'lonja', 'Lj6g0004000' => 'lja', 'Lj7A292G67' => 'lonja', 'Lj7A292T64' => 'lonja', 'Lj9A400T58' => 'lonja', 'Lsat_1_v5_gn_1_126181' => 'lsa', 'Lsat_1_v5_gn_4_123041' => 'lsa', 'Lsat_1_v5_gn_4_133620' => 'lsa', 'Lsat_1_v5_gn_4_53221' => 'lsa', 'Lsat_1_v5_gn_4_71961' => 'lsa', 'Lsat_1_v5_gn_7_105241' => 'lsa', 'Lsat_1_v5_gn_7_21361' => 'lsa', 'Lsat_1_v5_gn_7_28860' => 'lsa', 'Lsat_1_v5_gn_7_31260' => 'lsa', 'Lsat_1_v5_gn_8_52801' => 'lsa', 'Manes.02G191400' => 'mes', 'Manes.03G110100' => 'mes', 'Manes.04G071100' => 'mes', 'Manes.05G100500' => 'mes', 'Manes.05G164700' => 'mes', 'Manes.15G087000' => 'mes', 'Manes.15G121500' => 'mes', 'Manes.16G028300' => 'mes', 'Manes.17G046100' => 'mes', 'Manes.17G069800' => 'mes', 'Manes.18G100500' => 'mes', 'Mapoly0002s0109' => 'mpo', 'Mapoly0024s0007' => 'mpo', 'Mapoly0089s0032' => 'mpo', 'MBI04_g42241_MAGBIO' => 'mbi', 'MBI05_g11988_MAGBIO' => 'mbi', 'MBI05_g35452_MAGBIO' => 'mbi', 'MBI07_g30179_MAGBIO' => 'mbi', 'MBI07_g35859_MAGBIO' => 'mbi', 'MBI07_g35860_MAGBIO' => 'mbi', 'MBI07_g37166_MAGBIO' => 'mbi', 'MBI08_g18172_MAGBIO' => 'mbi', 'MBI09_g08441_MAGBIO' => 'mbi', 'MBI13_g01676_MAGBIO' => 'mbi', 'MBI14_g42955_MAGBIO' => 'mbi', 'MBI16_g13161_MAGBIO' => 'mbi', 'MBI17_g27204_MAGBIO' => 'mbi', 'MBI19_g21595_MAGBIO' => 'mbi', 'MD00G1148400' => 'mdo', 'MD02G1301200' => 'mdo', 'MD03G1227800' => 'mdo', 'MD05G1041100' => 'mdo', 'MD05G1124800' => 'mdo', 'MD05G1284000' => 'mdo', 'MD05G1338800' => 'mdo', 'MD05G1338900' => 'mdo', 'MD07G1022800' => 'mdo', 'MD10G1047500' => 'mdo', 'MD10G1127500' => 'mdo', 'MD10G1262300' => 'mdo', 'MD10G1293800' => 'mdo', 'MD16G1074300' => 'mdo', 'Medtr1g021670' => 'mtr', 'Medtr1g096320' => 'mtr', 'Medtr2g013690' => 'mtr', 'Medtr2g019450' => 'mtr', 'Medtr2g085170' => 'mtr', 'Medtr4g088785' => 'mtr', 'Medtr8g055930' => 'mtr', 'Medtr8g085850' => 'mtr', 'MELO3C002605.2' => 'cme', 'MELO3C003891.2' => 'cme', 'MELO3C004012.2' => 'cme', 'MELO3C007134.2' => 'cme', 'MELO3C008118.2' => 'cme', 'MELO3C016700.2' => 'cme', 'MELO3C024127.2' => 'cme', 'MELO3C033361.2' => 'cme', 'MELO3C033362.2' => 'cme', 'Migut.C00430' => 'egut', 'Migut.C01246' => 'egut', 'Migut.E00101' => 'egut', 'Migut.H01486' => 'egut', 'Migut.H01939' => 'egut', 'Migut.K00360' => 'egut', 'Migut.M00910' => 'egut', 'Migut.M01139' => 'egut', 'Migut.N02677' => 'egut', 'MSTRG.13252' => 'ama', 'MSTRG.14701' => 'ama', 'MSTRG.1521' => 'ama', 'MSTRG.15884' => 'ama', 'MSTRG.16242' => 'ama', 'MSTRG.22285' => 'ama', 'MSTRG.22444' => 'ama', 'MSTRG.2349' => 'ama', 'MSTRG.26308' => 'ama', 'MSTRG.28296' => 'ama', 'MSTRG.9895' => 'ama', 'Nitab4.5_0000110g0060' => 'nta', 'Nitab4.5_0000420g0130' => 'nta', 'Nitab4.5_0000422g0030' => 'nta', 'Nitab4.5_0000560g0180' => 'nta', 'Nitab4.5_0000703g0100' => 'nta', 'Nitab4.5_0000786g0200' => 'nta', 'Nitab4.5_0001336g0020' => 'nta', 'Nitab4.5_0001796g0030' => 'nta', 'Nitab4.5_0003348g0060' => 'nta', 'Nitab4.5_0003698g0040' => 'nta', 'Nitab4.5_0003942g0090' => 'nta', 'Nitab4.5_0004775g0070' => 'nta', 'Nitab4.5_0004864g0030' => 'nta', 'Nitab4.5_0005615g0020' => 'nta', 'Nitab4.5_0009288g0030' => 'nta', 'Nitab4.5_0009341g0010' => 'nta', 'Nitab4.5_0009535g0010' => 'nta', 'Nn1g03995' => 'nnu', 'Nn1g04100' => 'nnu', 'Nn1g06530' => 'nnu', 'Nn3g16404' => 'nnu', 'Nn3g17212' => 'nnu', 'Nn3g20776' => 'nnu', 'Nn3g21923' => 'nnu', 'Nn5g27737' => 'nnu', 'Nn5g29461' => 'nnu', 'Nn7g38355' => 'nnu', 'Nn8g39873' => 'nnu', 'Oeu000548.2' => 'oeu', 'Oeu004672.1' => 'oeu', 'Oeu015605.2' => 'oeu', 'Oeu016092.1' => 'oeu', 'Oeu017879.3' => 'oeu', 'Oeu024910.1' => 'oeu', 'Oeu028965.1' => 'oeu', 'Oeu031269.1' => 'oeu', 'Oeu031270.1' => 'oeu', 'Oeu032535.1' => 'oeu', 'Oeu034151.1' => 'oeu', 'Oeu034152.1' => 'oeu', 'Oeu034588.2' => 'oeu', 'Oeu050846.1' => 'oeu', 'Oeu050849.2' => 'oeu', 'Oeu051063.2' => 'oeu', 'Oeu052368.1' => 'oeu', 'Oeu052370.1' => 'oeu', 'Os01g0210400' => 'osa', 'Os01g0304300' => 'osa', 'Os01g0749100' => 'osa', 'Os02g0745800' => 'osa', 'Os03g0769050' => 'osa', 'Os05g0531500' => 'osa', 'Os06g0724300' => 'osa', 'Os11g0198100' => 'osa', 'Peaxi162Scf00069g01425' => 'pax', 'Peaxi162Scf00280g00811' => 'pax', 'Peaxi162Scf00310g00615' => 'pax', 'Peaxi162Scf00362g00542' => 'pax', 'Peaxi162Scf00461g00310' => 'pax', 'Peaxi162Scf00530g00118' => 'pax', 'Peaxi162Scf00541g00057' => 'pax', 'Peaxi162Scf00661g00017' => 'pax', 'Peaxi162Scf00926g00027' => 'pax', 'Peaxi162Scf01064g00263' => 'pax', 'Peaxi162Scf01211g00135' => 'pax', 'PGR004G2336' => 'pgr', 'PGR042G0327' => 'pgr', 'PGR042G1957' => 'pgr', 'PGR042G2003' => 'pgr', 'PGR042G3929' => 'pgr', 'PGR083G1137' => 'pgr', 'PGR083G1364' => 'pgr', 'PGSC0003DMG400003381' => 'stu', 'PGSC0003DMG400003417' => 'stu', 'PGSC0003DMG400008981' => 'stu', 'PGSC0003DMG400012417' => 'stu', 'PGSC0003DMG400012823' => 'stu', 'PGSC0003DMG400016885' => 'stu', 'PGSC0003DMG400022812' => 'stu', 'PGSC0003DMG400029726' => 'stu', 'PGSC0003DMG401009243' => 'stu', 'PGSC0003DMG401031505' => 'stu', 'PGSC0003DMG402031505' => 'stu', 'Phvul.001G017600' => 'pvu', 'Phvul.002G193500' => 'pvu', 'Phvul.002G228900' => 'pvu', 'Phvul.002G236800' => 'pvu', 'Phvul.003G049500' => 'pvu', 'Phvul.005G072000' => 'pvu', 'Phvul.006G164800' => 'pvu', 'Phvul.006G185100' => 'pvu', 'Phvul.007G090000' => 'pvu', 'Potri.001G399800' => 'ptr', 'Potri.002G149900' => 'ptr', 'Potri.004G044100' => 'ptr', 'Potri.004G177600' => 'ptr', 'Potri.009G138000' => 'ptr', 'Potri.010G094000' => 'ptr', 'Potri.011G053000' => 'ptr', 'Potri.011G119300' => 'ptr', 'Potri.013G113700' => 'ptr', 'Potri.018G107800' => 'ptr', 'Potri.019G084100' => 'ptr', 'Pp3c14_23720' => 'ppa', 'Pp3c16_6340' => 'ppa', 'Pp3c23_13420' => 'ppa', 'Pp3c24_2740' => 'ppa', 'Pp3c25_860' => 'ppa', 'Pp3c8_21750' => 'ppa', 'Prupe.1G273000' => 'ppe', 'Prupe.1G273700' => 'ppe', 'Prupe.1G274100' => 'ppe', 'Prupe.2G023300' => 'ppe', 'Prupe.4G048000' => 'ppe', 'Prupe.4G080400' => 'ppe', 'Prupe.4G181200' => 'ppe', 'Prupe.8G056900' => 'ppe', 'Prupe.8G168700' => 'ppe', 'Psat1g189080' => 'psa', 'Psat1g204760' => 'psa', 'Psat4g175560' => 'psa', 'Psat4g177720' => 'psa', 'Psat5g244240' => 'psa', 'Psat6g010720' => 'psa', 'Psat6g187200' => 'psa', 'Psat7g072040' => 'psa', 'PSO017G3501' => 'pso', 'PSO063G2148' => 'pso', 'PSO063G5608' => 'pso', 'PSO210G6392' => 'pso', 'PSO541G2319' => 'pso', 'PSO541G2836' => 'pso', 'PSO541G4012' => 'pso', 'PSO541G6253' => 'pso', 'PSO675G0580' => 'pso', 'PSO675G0856' => 'pso', 'PSO675G5635' => 'pso', 'PSO675G9157' => 'pso', 'PSO832G1660' => 'pso', 'PSO832G1969' => 'pso', 'QL02p007186' => 'qlo', 'QL02p033904' => 'qlo', 'QL03p064391' => 'qlo', 'QL05p040593' => 'qlo', 'QL05p058242' => 'qlo', 'QL08p021825' => 'qlo', 'QL11p004981' => 'qlo', 'RcHm_v2.0_Chr1g0318301' => 'rch', 'RcHm_v2.0_Chr4g0418501' => 'rch', 'RcHm_v2.0_Chr4g0439971' => 'rch', 'RcHm_v2.0_Chr5g0008541' => 'rch', 'RcHm_v2.0_Chr5g0014101' => 'rch', 'RcHm_v2.0_Chr5g0014131' => 'rch', 'RcHm_v2.0_Chr5g0033621' => 'rch', 'RcHm_v2.0_Chr6g0272041' => 'rch', 'RcHm_v2.0_Chr6g0278831' => 'rch', 'Rhsim02G0130400' => 'rsi', 'Rhsim02G0171100' => 'rsi', 'Rhsim05G0053000' => 'rsi', 'Rhsim05G0053100' => 'rsi', 'Rhsim06G0096500' => 'rsi', 'Rhsim06G0096600' => 'rsi', 'Rhsim06G0199100' => 'rsi', 'Rhsim12G0062300' => 'rsi', 'Rhsim12G0062800' => 'rsi', 'Sabra02G0118600' => 'sbr', 'Sabra04G0027300' => 'sbr', 'Sabra04G0119500' => 'sbr', 'Sabra08G0112500' => 'sbr', 'Sabra11G0036800' => 'sbr', 'Sabra11G0103800' => 'sbr', 'Sabra13G0096300' => 'sbr', 'Sabra16G0262300' => 'sbr', 'Sabra18G0091700' => 'sbr', 'Sabra19G0095400' => 'sbr', 'SalBow6G3080' => 'sbo', 'SalBow7G1157' => 'sbo', 'SalBow7G2123' => 'sbo', 'SalBow7G2285' => 'sbo', 'SalBow7G3537' => 'sbo', 'SalBow8G2947' => 'sbo', 'SalBow8G4463' => 'sbo', 'SalBow8G5466' => 'sbo', 'Sc01g0001750' => 'sci', 'Sc02g0006640' => 'sci', 'Sc02g0006670' => 'sci', 'Sc04g0008220' => 'sci', 'Sc05g0006190' => 'sci', 'Sc08g0002760' => 'sci', 'Sc17g0006170' => 'sci', 'Sc22g0002050' => 'sci', 'Sc23g0001190' => 'sci', 'Sc24g0000980' => 'sci', 'Sed0006245' => 'sed', 'Sed0007543' => 'sed', 'Sed0009411' => 'sed', 'Sed0010765' => 'sed', 'Sed0012944' => 'sed', 'Sed0014682' => 'sed', 'Sed0016174' => 'sed', 'Sed0016796' => 'sed', 'Sed0020317' => 'sed', 'Sed0021467' => 'sed', 'SEGI_01316' => 'sgi', 'SEGI_03374' => 'sgi', 'SEGI_16265' => 'sgi', 'SEGI_18569' => 'sgi', 'SEGI_20351' => 'sgi', 'SEGI_26395' => 'sgi', 'SEGI_29469' => 'sgi', 'SEGI_34771' => 'sgi', 'SEGI_36769' => 'sgi', 'SEGI_37139' => 'sgi', 'SGA_v2.0_scaffold100G29687' => 'sas', 'SGA_v2.0_scaffold118G32472' => 'sas', 'SGA_v2.0_scaffold14G07051' => 'sas', 'SGA_v2.0_scaffold183G39845' => 'sas', 'SGA_v2.0_scaffold1G00174' => 'sas', 'SGA_v2.0_scaffold22G09714' => 'sas', 'SGA_v2.0_scaffold333G48992' => 'sas', 'SGA_v2.0_scaffold46G17491' => 'sas', 'SGA_v2.0_scaffold49G18294' => 'sas', 'SGA_v2.0_scaffold63G21658' => 'sas', 'SHI01741' => 'shi', 'SHI05771' => 'shi', 'SHI18077' => 'shi', 'SHI20525' => 'shi', 'SHI20527' => 'shi', 'SHI20528' => 'shi', 'SMO172G0185' => 'smo', 'SMO198G0020' => 'smo', 'SMO351G0006' => 'smo', 'SMO356G0118' => 'smo', 'SMO358G0296' => 'smo', 'SMO367G0079' => 'smo', 'SMO367G1277' => 'smo', 'Solyc01g014220.3' => 'sly', 'Solyc01g111770.2' => 'sly', 'Solyc02g078180.3' => 'sly', 'Solyc03g006430.3' => 'sly', 'Solyc03g006456.1' => 'sly', 'Solyc03g079860.2' => 'sly', 'Solyc04g079770.3' => 'sly', 'Solyc05g007430.4' => 'sly', 'Solyc07g063150.3' => 'sly', 'Solyc08g016620.3' => 'sly', 'Solyc09g057590.3' => 'sly', 'Solyc09g057600.1' => 'sly', 'Solyc10g009050.3' => 'sly', 'Solyc11g017420.2' => 'sly', 'Sopen01g053810' => 'spe', 'Sopen02g023040' => 'spe', 'Sopen03g002440' => 'spe', 'Sopen04g033350' => 'spe', 'Sopen05g003310' => 'spe', 'Sopen07g004050' => 'spe', 'Sopen07g031340' => 'spe', 'Sopen08g006990' => 'spe', 'Sopen10g004830' => 'spe', 'Sopen11g009370' => 'spe', 'Sp1g24450' => 'spa', 'Sp1g29670' => 'spa', 'Sp1g39600' => 'spa', 'Sp2g11080' => 'spa', 'Sp2g13970' => 'spa', 'Sp4g16130' => 'spa', 'Sp6g13080' => 'spa', 'Sp7g37270' => 'spa', 'TAR371G0065' => 'tar', 'TAR376G0340' => 'tar', 'TAR376G0435' => 'tar', 'TAR381G0002' => 'tar', 'TAR381G1236' => 'tar', 'TAR624G0055' => 'tar', 'TAR624G0324' => 'tar', 'TAR624G0696' => 'tar', 'TAR624G0906' => 'tar', 'TAR625G0107' => 'tar', 'TAR626G0015' => 'tar', 'TAR626G1356' => 'tar', 'TAR627G0888' => 'tar', 'TAR628G0399' => 'tar', 'TAR628G1327' => 'tar', 'TAR629G2831' => 'tar', 'TAR629G2874' => 'tar', 'TAR633G1432' => 'tar', 'TAR633G2771' => 'tar', 'THA.LOC104803394' => 'tha', 'THA.LOC104805153' => 'tha', 'THA.LOC104806784' => 'tha', 'THA.LOC104810473' => 'tha', 'THA.LOC104813100' => 'tha', 'THA.LOC104814215' => 'tha', 'THA.LOC104815554' => 'tha', 'THA.LOC104820544' => 'tha', 'THA.LOC104824754' => 'tha', 'THA.LOC104827717' => 'tha', 'Thecc.02G031400' => 'tca', 'Thecc.02G055900' => 'tca', 'Thecc.02G350800' => 'tca', 'Thecc.06G150900' => 'tca', 'Thecc.06G186600' => 'tca', 'Thecc.07G089600' => 'tca', 'Thecc.08G020400' => 'tca', 'Thecc.08G182100' => 'tca', 'Thhalv10000873m.g' => 'esa', 'Thhalv10004185m.g' => 'esa', 'Thhalv10006981m.g' => 'esa', 'Thhalv10007204m.g' => 'esa', 'Thhalv10011374m.g' => 'esa', 'Thhalv10013482m.g' => 'esa', 'Thhalv10017801m.g' => 'esa', 'Thhalv10024983m.g' => 'esa', 'TPR.G12072' => 'tpr', 'TPR.G15769' => 'tpr', 'TPR.G16504' => 'tpr', 'TPR.G16506' => 'tpr', 'TPR.G24345' => 'tpr', 'TPR.G26666' => 'tpr', 'TPR.G27320' => 'tpr', 'TPR.G31819' => 'tpr', 'TPR.G38879' => 'tpr', 'TPR.G39015' => 'tpr', 'TPR.G8819' => 'tpr', 'TWI09G0924' => 'twi', 'TWI12G0811' => 'twi', 'TWI12G1294' => 'twi', 'TWI31G0150' => 'twi', 'TWI36G1262' => 'twi', 'TWI38G1287' => 'twi', 'TWI38G1633' => 'twi', 'TWI38G1982' => 'twi', 'TWI39G0116' => 'twi', 'TWI60G1011' => 'twi', 'TWI63G0171' => 'twi', 'TWI73G0839' => 'twi', 'TWI79G1511' => 'twi', 'unitig_0.g915' => 'ugi', 'unitig_0.g916' => 'ugi', 'unitig_21.g20219' => 'ugi', 'unitig_21.g20416' => 'ugi', 'unitig_578.g16132' => 'ugi', 'unitig_578.g16718' => 'ugi', 'unitig_62.g23481' => 'ugi', 'unitig_744.g24535' => 'ugi', 'unitig_749.g13525' => 'ugi', 'vmacro01248' => 'vma', 'vmacro02290' => 'vma', 'vmacro10946' => 'vma', 'vmacro11865' => 'vma', 'vmacro12493' => 'vma', 'vmacro17322' => 'vma', 'vmacro21599' => 'vma', 'vmacro23041' => 'vma', 'VMungo0251G0004' => 'vmu', 'VMungo0251G2639' => 'vmu', 'VMungo0251G2967' => 'vmu', 'VMungo0540G0864' => 'vmu', 'VMungo0540G1569' => 'vmu', 'VMungo0647G0317' => 'vmu', 'VMungo0720G1373' => 'vmu', 'VMungo0720G1508' => 'vmu', 'VMungo1080G0485' => 'vmu', 'VMungo1215G3177' => 'vmu', 'Zm00001eb112600' => 'zma', 'Zm00001eb120220' => 'zma', 'Zm00001eb153240' => 'zma', 'Zm00001eb168880' => 'zma', 'Zm00001eb213920' => 'zma', 'Zm00001eb228280' => 'zma', 'Zm00001eb254580' => 'zma', 'Zm00001eb272180' => 'zma', 'Zm00001eb293190' => 'zma', 'Zm00001eb322930' => 'zma', 'Zm00001eb353360' => 'zma', 'Zm00001eb353390' => 'zma', 'Zm00001eb353430' => 'zma', 'Zm00001eb353440' => 'zma', 'Zm00001eb353780' => 'zma' ) $gf_id = 'HOM05D000499' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000499' ) $data_identifier = 'HOM05D000499' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 29, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 12, 'amhyb' => (int) 8, 'aly' => (int) 12, 'aox' => (int) 9, 'arhy' => (int) 26, 'ath' => (int) 8, 'atr' => (int) 7, 'acertr' => (int) 10, 'cqu' => (int) 15, 'bca' => (int) 29, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 11, 'cansat' => (int) 8, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 9, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 8, 'cpa' => (int) 10, 'csa' => (int) 7, 'camsi' => (int) 20, 'dca' => (int) 8, 'din' => (int) 12, 'dzi' => (int) 14, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 6, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 38, 'gra' => (int) 16, 'vvi' => (int) 8, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 5, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 11, 'lja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 11, 'mpo' => (int) 3, 'mbi' => (int) 14, 'mdo' => (int) 14, 'mtr' => (int) 8, 'cme' => (int) 9, 'egut' => (int) 9, 'ama' => (int) 11, 'nta' => (int) 17, 'nnu' => (int) 11, 'oeu' => (int) 18, 'osa' => (int) 8, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 6, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 9, 'rsi' => (int) 9, 'sbr' => (int) 10, 'sbo' => (int) 8, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 10, 'sas' => (int) 10, 'shi' => (int) 6, 'smo' => (int) 7, 'sly' => (int) 14, 'spe' => (int) 10, 'spa' => (int) 8, 'tar' => (int) 19, 'tha' => (int) 10, 'tca' => (int) 8, 'esa' => (int) 8, 'tpr' => (int) 11, 'twi' => (int) 13, 'ugi' => (int) 9, 'vma' => (int) 8, 'vmu' => (int) 10, 'zma' => (int) 15 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb353780' $species_info = array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ) $local_species = 'esa' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000499', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1066', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p29780' => 'bna', 'A02p33180' => 'bna', 'A03p16470' => 'bna', 'A03p66010' => 'bna', 'A04p25970' => 'bna', 'A06p01270' => 'bna', 'A06p46080' => 'bna', 'A07p11400' => 'bna', 'A08p01840' => 'bna', 'A08p08230' => 'bna', 'A08p25740' => 'bna', 'A09p32070' => 'bna', 'A09p37830' => 'bna', 'A09p42840' => 'bna', 'A09p42850' => 'bna', 'Aa31LG10G2060' => 'aar', 'Aa31LG2G7410' => 'aar', 'Aa31LG6G10200' => 'aar', 'Aa31LG6G16680' => 'aar', 'Aa31LG6G8470' => 'aar', 'Aa31LG9G12730' => 'aar', 'Aa31LG9G13680' => 'aar', 'Aa31LG9G14920' => 'aar', 'Aa31LG9G6650' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4977' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5467' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3254' => 'aag', 'Actinidia02578' => 'ach', 'Actinidia07693' => 'ach', 'Actinidia08413' => 'ach', 'Actinidia08414' => 'ach', 'Actinidia15289' => 'ach', 'Actinidia19871' => 'ach', 'Actinidia21475' => 'ach', 'Actinidia22576' => 'ach', 'Actinidia28327' => 'ach', 'Actinidia32491' => 'ach', 'Actinidia39463' => 'ach', 'Actinidia39571' => 'ach', 'Ah.01g013750' => 'amhyb', 'Ah.01g023210' => 'amhyb', 'Ah.04g164850' => 'amhyb', 'Ah.05g178060' => 'amhyb', 'Ah.07g204270' => 'amhyb', 'Ah.07g208480' => 'amhyb', 'Ah.09g237410' => 'amhyb', 'Ah.14g089460' => 'amhyb', 'AL1G41790' => 'aly', 'AL1G49050' => 'aly', 'AL1G53810' => 'aly', 'AL1G61400' => 'aly', 'AL4G18580' => 'aly', 'AL5G12510' => 'aly', 'AL5G12540' => 'aly', 'AL6G43230' => 'aly', 'AL7G10370' => 'aly', 'AL7G19250' => 'aly', 'AL8G12240' => 'aly', 'AL8G18540' => 'aly', 'Aqoxy1G02409' => 'aox', 'Aqoxy2G03993' => 'aox', 'Aqoxy3G03357' => 'aox', 'Aqoxy4G00785' => 'aox', 'Aqoxy5G02598' => 'aox', 'Aqoxy6G00132' => 'aox', 'Aqoxy7G01776' => 'aox', 'Aqoxy7G02316' => 'aox', 'Aqoxy7G03973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.12AFKW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B8730' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27IQR1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3F75VG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3RE0GA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41TCQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.527VTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FIR39' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5W8UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DA38EV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ63HS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H1I32C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HC27T5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4M8AP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7N3CZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9UVDZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LS1NQA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT1D4B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SKC4TM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCFV76' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF9Q1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQWD9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1ZM88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WE07RT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YCK7VH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJE6Q6' => 'arhy', 'AT1G28240' => 'ath', 'AT1G34550' => 'ath', 'AT1G53040' => 'ath', 'AT2G02910' => 'ath', 'AT4G09630' => 'ath', 'AT4G38500' => 'ath', 'AT5G42660' => 'ath', 'AT5G46220' => 'ath', 'ATR0152G026' => 'atr', 'ATR0564G343' => 'atr', 'ATR0706G151' => 'atr', 'ATR0733G207' => 'atr', 'ATR0751G234' => 'atr', 'ATR0807G048' => 'atr', 'ATR1091G084' => 'atr', 'Atru.chr10.1229' => 'acertr', 'Atru.chr10.1230' => 'acertr', 'Atru.chr10.1874' => 'acertr', 'Atru.chr11.1808' => 'acertr', 'Atru.chr13.1795' => 'acertr', 'Atru.chr13.570' => 'acertr', 'Atru.chr2.2608' => 'acertr', 'Atru.chr2.2609' => 'acertr', 'Atru.chr5.3428' => 'acertr', 'Atru.chr8.1171' => 'acertr', 'AUR62004651' => 'cqu', 'AUR62008675' => 'cqu', 'AUR62010014' => 'cqu', 'AUR62013004' => 'cqu', 'AUR62014825' => 'cqu', 'AUR62015015' => 'cqu', 'AUR62015151' => 'cqu', 'AUR62017020' => 'cqu', 'AUR62019422' => 'cqu', 'AUR62023570' => 'cqu', 'AUR62025571' => 'cqu', 'AUR62029098' => 'cqu', 'AUR62033863' => 'cqu', 'AUR62034296' => 'cqu', 'AUR62040075' => 'cqu', 'BcaB02g07334' => 'bca', 'BcaB02g10575' => 'bca', 'BcaB03g12119' => 'bca', 'BcaB03g12120' => 'bca', 'BcaB03g13945' => 'bca', 'BcaB04g17123' => 'bca', 'BcaB04g17867' => 'bca', 'BcaB04g19839' => 'bca', 'BcaB07g30317' => 'bca', 'BcaB07g32432' => 'bca', 'BcaB07g33362' => 'bca', 'BcaB08g36611' => 'bca', 'BcaC01g00028' => 'bca', 'BcaC01g01356' => 'bca', 'BcaC01g02034' => 'bca', 'BcaC01g06051' => 'bca', 'BcaC03g16839' => 'bca', 'BcaC03g17176' => 'bca', 'BcaC05g26829' => 'bca', 'BcaC06g31490' => 'bca', 'BcaC06g35344' => 'bca', 'BcaC06g36570' => 'bca', 'BcaC07g37537' => 'bca', 'BcaC08g43491' => 'bca', 'BcaC08g43773' => 'bca', 'BcaNung00234' => 'bca', 'BcaNung01982' => 'bca', 'BcaNung03707' => 'bca', 'BcaNung06454' => 'bca', 'BolC2t10762H' => 'bol', 'BolC2t11191H' => 'bol', 'BolC3t14322H' => 'bol', 'BolC3t19747H' => 'bol', 'BolC3t21425H' => 'bol', 'BolC4t27800H' => 'bol', 'BolC5t31423H' => 'bol', 'BolC6t35951H' => 'bol', 'BolC6t36282H' => 'bol', 'BolC7t40678H' => 'bol', 'BolC7t40679H' => 'bol', 'BolC7t42222H' => 'bol', 'BolC7t43492H' => 'bol', 'BolC7t46785H' => 'bol', 'BolC8t47853H' => 'bol', 'BolC9t56805H' => 'bol', 'BraA02t08000Z' => 'bra', 'BraA02t08341Z' => 'bra', 'BraA03t10936Z' => 'bra', 'BraA03t15657Z' => 'bra', 'BraA04t18100Z' => 'bra', 'BraA05t20523Z' => 'bra', 'BraA06t23353Z' => 'bra', 'BraA06t27473Z' => 'bra', 'BraA06t27769Z' => 'bra', 'BraA07t28928Z' => 'bra', 'BraA08t32236Z' => 'bra', 'BraA08t32841Z' => 'bra', 'BraA08t34524Z' => 'bra', 'BraA09t38742Z' => 'bra', 'BraA09t39295Z' => 'bra', 'C02p47180' => 'bna', 'C02p50990' => 'bna', 'C03p19360' => 'bna', 'C03p74950' => 'bna', 'C03p91000' => 'bna', 'C04p63260' => 'bna', 'C05p27050' => 'bna', 'C06p08750' => 'bna', 'C06p11490' => 'bna', 'C07p02820' => 'bna', 'C07p17180' => 'bna', 'C07p29440' => 'bna', 'C07p63730' => 'bna', 'C09p39260' => 'bna', 'CAN.G1164.34' => 'can', 'CAN.G1164.39' => 'can', 'CAN.G1530.3' => 'can', 'CAN.G162.61' => 'can', 'CAN.G176.6' => 'can', 'CAN.G289.49' => 'can', 'CAN.G370.21' => 'can', 'CAN.G370.22' => 'can', 'CAN.G371.117' => 'can', 'CAN.G58.37' => 'can', 'CAN.G588.98' => 'can', 'CANSAT21G2266' => 'cansat', 'CANSAT25G2799' => 'cansat', 'CANSAT35G0862' => 'cansat', 'CANSAT35G1704' => 'cansat', 'CANSAT35G1760' => 'cansat', 'CANSAT56G3971' => 'cansat', 'CANSAT56G4116' => 'cansat', 'CANSAT80G1259' => 'cansat', 'CARHR027730' => 'chi', 'CARHR033880' => 'chi', 'CARHR043270' => 'chi', 'CARHR145330' => 'chi', 'CARHR145340' => 'chi', 'CARHR175570' => 'chi', 'CARHR181570' => 'chi', 'CARHR258470' => 'chi', 'CARHR260490' => 'chi', 'CARHR294220' => 'chi', 'Carub.0001s2668' => 'cru', 'Carub.0001s3257' => 'cru', 'Carub.0001s4220' => 'cru', 'Carub.0005s0179' => 'cru', 'Carub.0006s2807' => 'cru', 'Carub.0007s0039' => 'cru', 'Carub.0008s0169' => 'cru', 'Carub.0008s0636' => 'cru', 'Ca_00338_v3' => 'car', 'Ca_00542_v3' => 'car', 'Ca_01844_v3' => 'car', 'Ca_10611_v3' => 'car', 'Ca_13326_v3' => 'car', 'Ca_17944_v3' => 'car', 'Ca_18546_v3' => 'car', 'Ca_24219_v3' => 'car', 'Ca_29972_v3' => 'car', 'CBR_g3681' => 'cbr', 'CBR_g40021' => 'cbr', 'Cc01_g08140' => 'ccan', 'Cc02_g13410' => 'ccan', 'Cc02_g37480' => 'ccan', 'Cc05_g12030' => 'ccan', 'Cc09_g03370' => 'ccan', 'Cc09_g10300' => 'ccan', 'Cc10_g03530' => 'ccan', 'Cc10_g11380' => 'ccan', 'CDE01G0176' => 'cde', 'CDE02G0675' => 'cde', 'CDE02G0942' => 'cde', 'CDE02G1153' => 'cde', 'CDE02G4177' => 'cde', 'CDE04G2117' => 'cde', 'CDE04G2736' => 'cde', 'CDE08G1161' => 'cde', 'CDE09G1238' => 'cde', 'Cfa000467' => 'cfa', 'Cfa000947' => 'cfa', 'Cfa004969' => 'cfa', 'Cfa005284' => 'cfa', 'Cfa008993' => 'cfa', 'Cfa018187' => 'cfa', 'Cfa018454' => 'cfa', 'Cfa020585' => 'cfa', 'Ciclev10000424m.g' => 'ccl', 'Ciclev10003605m.g' => 'ccl', 'Ciclev10007828m.g' => 'ccl', 'Ciclev10014620m.g' => 'ccl', 'Ciclev10015169m.g' => 'ccl', 'Ciclev10018291m.g' => 'ccl', 'Ciclev10028256m.g' => 'ccl', 'Ciclev10033822m.g' => 'ccl', 'CiPaw.05G060300' => 'cil', 'CiPaw.05G085000' => 'cil', 'CiPaw.06G083700' => 'cil', 'CiPaw.06G120300' => 'cil', 'CiPaw.09G060500' => 'cil', 'CiPaw.09G123800' => 'cil', 'CiPaw.11G169700' => 'cil', 'CiPaw.12G118300' => 'cil', 'CiPaw.15G071000' => 'cil', 'CiPaw.15G081900' => 'cil', 'ClCG01G024610' => 'cla', 'ClCG03G006070' => 'cla', 'ClCG05G019250' => 'cla', 'ClCG09G009500' => 'cla', 'ClCG11G008200' => 'cla', 'ClCG11G018080' => 'cla', 'COL.COLO4_17373' => 'col', 'COL.COLO4_22994' => 'col', 'COL.COLO4_26389' => 'col', 'COL.COLO4_27170' => 'col', 'COL.COLO4_31074' => 'col', 'COL.COLO4_31465' => 'col', 'COL.COLO4_36438' => 'col', 'COL.COLO4_36439' => 'col', 'Cpa.g.c38781' => 'cpa', 'Cpa.g.sc128.12' => 'cpa', 'Cpa.g.sc166.7' => 'cpa', 'Cpa.g.sc166.8' => 'cpa', 'Cpa.g.sc20.111' => 'cpa', 'Cpa.g.sc27.31' => 'cpa', 'Cpa.g.sc64.36' => 'cpa', 'Cpa.g.sc64.37' => 'cpa', 'Cpa.g.sc66.49' => 'cpa', 'Cpa.g.sc80.64' => 'cpa', 'CsaV3_1G012320' => 'csa', 'CsaV3_2G008480' => 'csa', 'CsaV3_2G033450' => 'csa', 'CsaV3_3G044830' => 'csa', 'CsaV3_4G033710' => 'csa', 'CsaV3_6G051730' => 'csa', 'CsaV3_7G025350' => 'csa', 'CSS0001067' => 'camsi', 'CSS0005996' => 'camsi', 'CSS0006590' => 'camsi', 'CSS0009673' => 'camsi', 'CSS0010201' => 'camsi', 'CSS0010549' => 'camsi', 'CSS0011364' => 'camsi', 'CSS0014473' => 'camsi', 'CSS0014961' => 'camsi', 'CSS0020191' => 'camsi', 'CSS0021165' => 'camsi', 'CSS0022306' => 'camsi', 'CSS0030591' => 'camsi', 'CSS0030696' => 'camsi', 'CSS0032653' => 'camsi', 'CSS0037487' => 'camsi', 'CSS0041102' => 'camsi', 'CSS0041261' => 'camsi', 'CSS0046246' => 'camsi', 'CSS0049256' => 'camsi', 'DCAR_004075' => 'dca', 'DCAR_011538' => 'dca', 'DCAR_019553' => 'dca', 'DCAR_020952' => 'dca', 'DCAR_021739' => 'dca', 'DCAR_027407' => 'dca', 'DCAR_027913' => 'dca', 'DCAR_028066' => 'dca', 'Dinv05899' => 'din', 'Dinv07563' => 'din', 'Dinv08010' => 'din', 'Dinv14125' => 'din', 'Dinv20172' => 'din', 'Dinv30743' => 'din', 'Dinv31229' => 'din', 'Dinv34162' => 'din', 'Dinv36028' => 'din', 'Dinv39368' => 'din', 'Dinv40565' => 'din', 'Dinv41706' => 'din', 'Duzib052G0089' => 'dzi', 'Duzib116G0641' => 'dzi', 'Duzib132G0069' => 'dzi', 'Duzib132G1219' => 'dzi', 'Duzib147G0278' => 'dzi', 'Duzib160G0480' => 'dzi', 'Duzib170G0661' => 'dzi', 'Duzib177G0591' => 'dzi', 'Duzib187G1353' => 'dzi', 'Duzib192G0858' => 'dzi', 'Duzib192G0883' => 'dzi', 'Duzib213G0506' => 'dzi', 'Duzib235G0289' => 'dzi', 'Duzib251G0422' => 'dzi', 'ECA232G3898' => 'eca', 'ECA233G5950' => 'eca', 'ECA234G1699' => 'eca', 'ECA234G2421' => 'eca', 'ECA236G0426' => 'eca', 'ECA236G4331' => 'eca', 'ECA248G2573' => 'eca', 'EL10Ac1g00077' => 'bvu', 'EL10Ac1g01746' => 'bvu', 'EL10Ac2g03464' => 'bvu', 'EL10Ac4g08176' => 'bvu', 'EL10Ac7g17521' => 'bvu', 'EL10Ac8g20386' => 'bvu', 'EL10Ac9g21343' => 'bvu', 'EL10Ac9g22688' => 'bvu', 'Eucgr.B03434' => 'egr', 'Eucgr.D00618' => 'egr', 'Eucgr.E02395' => 'egr', 'Eucgr.F01129' => 'egr', 'Eucgr.F02622' => 'egr', 'Eucgr.F04207' => 'egr', 'FAN01G0570' => 'fan', 'FAN03G3351' => 'fan', 'FAN06G3702' => 'fan', 'FAN07G2149' => 'fan', 'FAN10G3758' => 'fan', 'FAN11G1170' => 'fan', 'FAN11G2050' => 'fan', 'FAN11G2724' => 'fan', 'FAN12G1700' => 'fan', 'FAN12G2028' => 'fan', 'FAN15G1160' => 'fan', 'FAN15G3063' => 'fan', 'FAN16G2540' => 'fan', 'FAN16G3077' => 'fan', 'FAN16G3624' => 'fan', 'FAN17G0221' => 'fan', 'FAN20G2492' => 'fan', 'FAN20G2905' => 'fan', 'FAN21G0548' => 'fan', 'FAN21G1300' => 'fan', 'FAN22G0077' => 'fan', 'FAN22G1315' => 'fan', 'FAN24G1280' => 'fan', 'FAN24G1445' => 'fan', 'FAN24G3527' => 'fan', 'FAN25G0464' => 'fan', 'FAN25G2885' => 'fan', 'FAN25G3270' => 'fan', 'FAN27G1101' => 'fan', 'FAN27G2846' => 'fan', 'FAN27G3524' => 'fan', 'FvH4_2g11770' => 'fve', 'FvH4_2g15630' => 'fve', 'FvH4_3g05570' => 'fve', 'FvH4_3g09110' => 'fve', 'FvH4_3g19940' => 'fve', 'FvH4_4g04821' => 'fve', 'FvH4_4g31480' => 'fve', 'FvH4_7g01740' => 'fve', 'Glyma.05G130400' => 'gma', 'Glyma.05G156400' => 'gma', 'Glyma.07G197000' => 'gma', 'Glyma.08G085151' => 'gma', 'Glyma.08G114500' => 'gma', 'Glyma.08G300400' => 'gma', 'Glyma.10G215800' => 'gma', 'Glyma.12G224400' => 'gma', 'Glyma.13G179300' => 'gma', 'Glyma.13G218151' => 'gma', 'Glyma.13G238800' => 'gma', 'Glyma.13G276900' => 'gma', 'Glyma.14G078200' => 'gma', 'Glyma.15G074500' => 'gma', 'Glyma.15G094100' => 'gma', 'Glyma.17G247200' => 'gma', 'Glyma.18G120100' => 'gma', 'Glyma.20G176000' => 'gma', 'Gohir.A01G063600' => 'ghi', 'Gohir.A01G170301' => 'ghi', 'Gohir.A02G060500' => 'ghi', 'Gohir.A05G133850' => 'ghi', 'Gohir.A05G161400' => 'ghi', 'Gohir.A06G012900' => 'ghi', 'Gohir.A06G035901' => 'ghi', 'Gohir.A06G127100' => 'ghi', 'Gohir.A06G210500' => 'ghi', 'Gohir.A08G008650' => 'ghi', 'Gohir.A09G072700' => 'ghi', 'Gohir.A09G088301' => 'ghi', 'Gohir.A10G040600' => 'ghi', 'Gohir.A12G036300' => 'ghi', 'Gohir.A12G143350' => 'ghi', 'Gohir.A12G165500' => 'ghi', 'Gohir.A13G145700' => 'ghi', 'Gohir.D01G050000' => 'ghi', 'Gohir.D01G051366' => 'ghi', 'Gohir.D01G161350' => 'ghi', 'Gohir.D02G065900' => 'ghi', 'Gohir.D05G164200' => 'ghi', 'Gohir.D05G355500' => 'ghi', 'Gohir.D06G010400' => 'ghi', 'Gohir.D06G111250' => 'ghi', 'Gohir.D06G132000' => 'ghi', 'Gohir.D06G210500' => 'ghi', 'Gohir.D07G165675' => 'ghi', 'Gohir.D08G062240' => 'ghi', 'Gohir.D08G086101' => 'ghi', 'Gohir.D08G138060' => 'ghi', 'Gohir.D09G072300' => 'ghi', 'Gohir.D10G041400' => 'ghi', 'Gohir.D11G191020' => 'ghi', 'Gohir.D11G212066' => 'ghi', 'Gohir.D12G036300' => 'ghi', 'Gohir.D12G168600' => 'ghi', 'Gohir.D13G150600' => 'ghi', 'Gorai.001G057300' => 'gra', 'Gorai.002G069900' => 'gra', 'Gorai.002G200000' => 'gra', 'Gorai.003G067600' => 'gra', 'Gorai.005G074800' => 'gra', 'Gorai.006G087300' => 'gra', 'Gorai.008G037500' => 'gra', 'Gorai.008G181400' => 'gra', 'Gorai.009G169400' => 'gra', 'Gorai.009G387900' => 'gra', 'Gorai.010G013300' => 'gra', 'Gorai.010G153800' => 'gra', 'Gorai.010G255800' => 'gra', 'Gorai.011G043700' => 'gra', 'Gorai.011G198900' => 'gra', 'Gorai.013G168400' => 'gra', 'GSVIVG01005212001' => 'vvi', 'GSVIVG01006163001' => 'vvi', 'GSVIVG01009625001' => 'vvi', 'GSVIVG01014338001' => 'vvi', 'GSVIVG01020005001' => 'vvi', 'GSVIVG01021450001' => 'vvi', 'GSVIVG01023975001' => 'vvi', 'GSVIVG01034490001' => 'vvi', 'HanXRQChr04g0112071' => 'han', 'HanXRQChr05g0131151' => 'han', 'HanXRQChr09g0262371' => 'han', 'HanXRQChr09g0268401' => 'han', 'HanXRQChr10g0279241' => 'han', 'HanXRQChr10g0297961' => 'han', 'HanXRQChr11g0326231' => 'han', 'HanXRQChr11g0328471' => 'han', 'HanXRQChr16g0507941' => 'han', 'HanXRQChr17g0560211' => 'han', 'Haze_02108' => 'cav', 'Haze_02428' => 'cav', 'Haze_05593' => 'cav', 'Haze_06448' => 'cav', 'Haze_09427' => 'cav', 'Haze_12022' => 'cav', 'Haze_17612' => 'cav', 'Haze_17928' => 'cav', 'Hma1.2p1_0032F.1_g019250' => 'hma', 'Hma1.2p1_0163F.1_g072690' => 'hma', 'Hma1.2p1_0265F.1_g106710' => 'hma', 'Hma1.2p1_0286F.1_g113970' => 'hma', 'Hma1.2p1_0363F.1_g136640' => 'hma', 'Hma1.2p1_0584F.1_g183470' => 'hma', 'Hma1.2p1_0885F.1_g232570' => 'hma', 'HPP92_006022' => 'vpl', 'HPP92_007320' => 'vpl', 'HPP92_011521' => 'vpl', 'HPP92_019387' => 'vpl', 'HPP92_024038' => 'vpl', 'Hund05891' => 'sun', 'Hund06450' => 'sun', 'Hund12053' => 'sun', 'Hund16800' => 'sun', 'Hund21222' => 'sun', 'Hund22896' => 'sun', 'Hund23746' => 'sun', 'Hund27083' => 'sun', 'Lalb_Chr02g0141831' => 'lal', 'Lalb_Chr02g0141841' => 'lal', 'Lalb_Chr05g0220411' => 'lal', 'Lalb_Chr06g0162081' => 'lal', 'Lalb_Chr09g0327651' => 'lal', 'Lalb_Chr13g0295051' => 'lal', 'Lalb_Chr15g0086801' => 'lal', 'Lalb_Chr16g0383781' => 'lal', 'Lalb_Chr16g0383791' => 'lal', 'Lalb_Chr18g0055441' => 'lal', 'Lalb_Chr18g0059611' => 'lal', 'Lalb_Chr20g0109661' => 'lal', 'Lalb_Chr20g0109831' => 'lal', 'Lalb_Chr20g0121871' => 'lal', 'Lalb_Chr22g0355361' => 'lal', 'Lalb_Chr25g0286371' => 'lal', 'Lj1A1187G43' => 'lonja', 'Lj1A1205T50' => 'lonja', 'Lj1A800G33' => 'lonja', 'Lj1C1187T7' => 'lonja', 'Lj1C843T11' => 'lonja', 'Lj1g0010940' => 'lja', 'Lj2A288T69' => 'lonja', 'Lj3g0024276' => 'lja', 'Lj4A47T76' => 'lonja', 'Lj4g0005805' => 'lja', 'Lj4g0006097' => 'lja', 'Lj4g0008528' => 'lja', 'Lj4g0024907' => 'lja', 'Lj5g0012472' => 'lja', 'Lj5g0018648' => 'lja', 'Lj6C789G1' => 'lonja', 'Lj6g0004000' => 'lja', 'Lj7A292G67' => 'lonja', 'Lj7A292T64' => 'lonja', 'Lj9A400T58' => 'lonja', 'Lsat_1_v5_gn_1_126181' => 'lsa', 'Lsat_1_v5_gn_4_123041' => 'lsa', 'Lsat_1_v5_gn_4_133620' => 'lsa', 'Lsat_1_v5_gn_4_53221' => 'lsa', 'Lsat_1_v5_gn_4_71961' => 'lsa', 'Lsat_1_v5_gn_7_105241' => 'lsa', 'Lsat_1_v5_gn_7_21361' => 'lsa', 'Lsat_1_v5_gn_7_28860' => 'lsa', 'Lsat_1_v5_gn_7_31260' => 'lsa', 'Lsat_1_v5_gn_8_52801' => 'lsa', 'Manes.02G191400' => 'mes', 'Manes.03G110100' => 'mes', 'Manes.04G071100' => 'mes', 'Manes.05G100500' => 'mes', 'Manes.05G164700' => 'mes', 'Manes.15G087000' => 'mes', 'Manes.15G121500' => 'mes', 'Manes.16G028300' => 'mes', 'Manes.17G046100' => 'mes', 'Manes.17G069800' => 'mes', 'Manes.18G100500' => 'mes', 'Mapoly0002s0109' => 'mpo', 'Mapoly0024s0007' => 'mpo', 'Mapoly0089s0032' => 'mpo', 'MBI04_g42241_MAGBIO' => 'mbi', 'MBI05_g11988_MAGBIO' => 'mbi', 'MBI05_g35452_MAGBIO' => 'mbi', 'MBI07_g30179_MAGBIO' => 'mbi', 'MBI07_g35859_MAGBIO' => 'mbi', 'MBI07_g35860_MAGBIO' => 'mbi', 'MBI07_g37166_MAGBIO' => 'mbi', 'MBI08_g18172_MAGBIO' => 'mbi', 'MBI09_g08441_MAGBIO' => 'mbi', 'MBI13_g01676_MAGBIO' => 'mbi', 'MBI14_g42955_MAGBIO' => 'mbi', 'MBI16_g13161_MAGBIO' => 'mbi', 'MBI17_g27204_MAGBIO' => 'mbi', 'MBI19_g21595_MAGBIO' => 'mbi', 'MD00G1148400' => 'mdo', 'MD02G1301200' => 'mdo', 'MD03G1227800' => 'mdo', 'MD05G1041100' => 'mdo', 'MD05G1124800' => 'mdo', 'MD05G1284000' => 'mdo', 'MD05G1338800' => 'mdo', 'MD05G1338900' => 'mdo', 'MD07G1022800' => 'mdo', 'MD10G1047500' => 'mdo', 'MD10G1127500' => 'mdo', 'MD10G1262300' => 'mdo', 'MD10G1293800' => 'mdo', 'MD16G1074300' => 'mdo', 'Medtr1g021670' => 'mtr', 'Medtr1g096320' => 'mtr', 'Medtr2g013690' => 'mtr', 'Medtr2g019450' => 'mtr', 'Medtr2g085170' => 'mtr', 'Medtr4g088785' => 'mtr', 'Medtr8g055930' => 'mtr', 'Medtr8g085850' => 'mtr', 'MELO3C002605.2' => 'cme', 'MELO3C003891.2' => 'cme', 'MELO3C004012.2' => 'cme', 'MELO3C007134.2' => 'cme', 'MELO3C008118.2' => 'cme', 'MELO3C016700.2' => 'cme', 'MELO3C024127.2' => 'cme', 'MELO3C033361.2' => 'cme', 'MELO3C033362.2' => 'cme', 'Migut.C00430' => 'egut', 'Migut.C01246' => 'egut', 'Migut.E00101' => 'egut', 'Migut.H01486' => 'egut', 'Migut.H01939' => 'egut', 'Migut.K00360' => 'egut', 'Migut.M00910' => 'egut', 'Migut.M01139' => 'egut', 'Migut.N02677' => 'egut', 'MSTRG.13252' => 'ama', 'MSTRG.14701' => 'ama', 'MSTRG.1521' => 'ama', 'MSTRG.15884' => 'ama', 'MSTRG.16242' => 'ama', 'MSTRG.22285' => 'ama', 'MSTRG.22444' => 'ama', 'MSTRG.2349' => 'ama', 'MSTRG.26308' => 'ama', 'MSTRG.28296' => 'ama', 'MSTRG.9895' => 'ama', 'Nitab4.5_0000110g0060' => 'nta', 'Nitab4.5_0000420g0130' => 'nta', 'Nitab4.5_0000422g0030' => 'nta', 'Nitab4.5_0000560g0180' => 'nta', 'Nitab4.5_0000703g0100' => 'nta', 'Nitab4.5_0000786g0200' => 'nta', 'Nitab4.5_0001336g0020' => 'nta', 'Nitab4.5_0001796g0030' => 'nta', 'Nitab4.5_0003348g0060' => 'nta', 'Nitab4.5_0003698g0040' => 'nta', 'Nitab4.5_0003942g0090' => 'nta', 'Nitab4.5_0004775g0070' => 'nta', 'Nitab4.5_0004864g0030' => 'nta', 'Nitab4.5_0005615g0020' => 'nta', 'Nitab4.5_0009288g0030' => 'nta', 'Nitab4.5_0009341g0010' => 'nta', 'Nitab4.5_0009535g0010' => 'nta', 'Nn1g03995' => 'nnu', 'Nn1g04100' => 'nnu', 'Nn1g06530' => 'nnu', 'Nn3g16404' => 'nnu', 'Nn3g17212' => 'nnu', 'Nn3g20776' => 'nnu', 'Nn3g21923' => 'nnu', 'Nn5g27737' => 'nnu', 'Nn5g29461' => 'nnu', 'Nn7g38355' => 'nnu', 'Nn8g39873' => 'nnu', 'Oeu000548.2' => 'oeu', 'Oeu004672.1' => 'oeu', 'Oeu015605.2' => 'oeu', 'Oeu016092.1' => 'oeu', 'Oeu017879.3' => 'oeu', 'Oeu024910.1' => 'oeu', 'Oeu028965.1' => 'oeu', 'Oeu031269.1' => 'oeu', 'Oeu031270.1' => 'oeu', 'Oeu032535.1' => 'oeu', 'Oeu034151.1' => 'oeu', 'Oeu034152.1' => 'oeu', 'Oeu034588.2' => 'oeu', 'Oeu050846.1' => 'oeu', 'Oeu050849.2' => 'oeu', 'Oeu051063.2' => 'oeu', 'Oeu052368.1' => 'oeu', 'Oeu052370.1' => 'oeu', 'Os01g0210400' => 'osa', 'Os01g0304300' => 'osa', 'Os01g0749100' => 'osa', 'Os02g0745800' => 'osa', 'Os03g0769050' => 'osa', 'Os05g0531500' => 'osa', 'Os06g0724300' => 'osa', 'Os11g0198100' => 'osa', 'Peaxi162Scf00069g01425' => 'pax', 'Peaxi162Scf00280g00811' => 'pax', 'Peaxi162Scf00310g00615' => 'pax', 'Peaxi162Scf00362g00542' => 'pax', 'Peaxi162Scf00461g00310' => 'pax', 'Peaxi162Scf00530g00118' => 'pax', 'Peaxi162Scf00541g00057' => 'pax', 'Peaxi162Scf00661g00017' => 'pax', 'Peaxi162Scf00926g00027' => 'pax', 'Peaxi162Scf01064g00263' => 'pax', 'Peaxi162Scf01211g00135' => 'pax', 'PGR004G2336' => 'pgr', 'PGR042G0327' => 'pgr', 'PGR042G1957' => 'pgr', 'PGR042G2003' => 'pgr', 'PGR042G3929' => 'pgr', 'PGR083G1137' => 'pgr', 'PGR083G1364' => 'pgr', 'PGSC0003DMG400003381' => 'stu', 'PGSC0003DMG400003417' => 'stu', 'PGSC0003DMG400008981' => 'stu', 'PGSC0003DMG400012417' => 'stu', 'PGSC0003DMG400012823' => 'stu', 'PGSC0003DMG400016885' => 'stu', 'PGSC0003DMG400022812' => 'stu', 'PGSC0003DMG400029726' => 'stu', 'PGSC0003DMG401009243' => 'stu', 'PGSC0003DMG401031505' => 'stu', 'PGSC0003DMG402031505' => 'stu', 'Phvul.001G017600' => 'pvu', 'Phvul.002G193500' => 'pvu', 'Phvul.002G228900' => 'pvu', 'Phvul.002G236800' => 'pvu', 'Phvul.003G049500' => 'pvu', 'Phvul.005G072000' => 'pvu', 'Phvul.006G164800' => 'pvu', 'Phvul.006G185100' => 'pvu', 'Phvul.007G090000' => 'pvu', 'Potri.001G399800' => 'ptr', 'Potri.002G149900' => 'ptr', 'Potri.004G044100' => 'ptr', 'Potri.004G177600' => 'ptr', 'Potri.009G138000' => 'ptr', 'Potri.010G094000' => 'ptr', 'Potri.011G053000' => 'ptr', 'Potri.011G119300' => 'ptr', 'Potri.013G113700' => 'ptr', 'Potri.018G107800' => 'ptr', 'Potri.019G084100' => 'ptr', 'Pp3c14_23720' => 'ppa', 'Pp3c16_6340' => 'ppa', 'Pp3c23_13420' => 'ppa', 'Pp3c24_2740' => 'ppa', 'Pp3c25_860' => 'ppa', 'Pp3c8_21750' => 'ppa', 'Prupe.1G273000' => 'ppe', 'Prupe.1G273700' => 'ppe', 'Prupe.1G274100' => 'ppe', 'Prupe.2G023300' => 'ppe', 'Prupe.4G048000' => 'ppe', 'Prupe.4G080400' => 'ppe', 'Prupe.4G181200' => 'ppe', 'Prupe.8G056900' => 'ppe', 'Prupe.8G168700' => 'ppe', 'Psat1g189080' => 'psa', 'Psat1g204760' => 'psa', 'Psat4g175560' => 'psa', 'Psat4g177720' => 'psa', 'Psat5g244240' => 'psa', 'Psat6g010720' => 'psa', 'Psat6g187200' => 'psa', 'Psat7g072040' => 'psa', 'PSO017G3501' => 'pso', 'PSO063G2148' => 'pso', 'PSO063G5608' => 'pso', 'PSO210G6392' => 'pso', 'PSO541G2319' => 'pso', 'PSO541G2836' => 'pso', 'PSO541G4012' => 'pso', 'PSO541G6253' => 'pso', 'PSO675G0580' => 'pso', 'PSO675G0856' => 'pso', 'PSO675G5635' => 'pso', 'PSO675G9157' => 'pso', 'PSO832G1660' => 'pso', 'PSO832G1969' => 'pso', 'QL02p007186' => 'qlo', 'QL02p033904' => 'qlo', 'QL03p064391' => 'qlo', 'QL05p040593' => 'qlo', 'QL05p058242' => 'qlo', 'QL08p021825' => 'qlo', 'QL11p004981' => 'qlo', 'RcHm_v2.0_Chr1g0318301' => 'rch', 'RcHm_v2.0_Chr4g0418501' => 'rch', 'RcHm_v2.0_Chr4g0439971' => 'rch', 'RcHm_v2.0_Chr5g0008541' => 'rch', 'RcHm_v2.0_Chr5g0014101' => 'rch', 'RcHm_v2.0_Chr5g0014131' => 'rch', 'RcHm_v2.0_Chr5g0033621' => 'rch', 'RcHm_v2.0_Chr6g0272041' => 'rch', 'RcHm_v2.0_Chr6g0278831' => 'rch', 'Rhsim02G0130400' => 'rsi', 'Rhsim02G0171100' => 'rsi', 'Rhsim05G0053000' => 'rsi', 'Rhsim05G0053100' => 'rsi', 'Rhsim06G0096500' => 'rsi', 'Rhsim06G0096600' => 'rsi', 'Rhsim06G0199100' => 'rsi', 'Rhsim12G0062300' => 'rsi', 'Rhsim12G0062800' => 'rsi', 'Sabra02G0118600' => 'sbr', 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'Solyc03g079860.2' => 'sly', 'Solyc04g079770.3' => 'sly', 'Solyc05g007430.4' => 'sly', 'Solyc07g063150.3' => 'sly', 'Solyc08g016620.3' => 'sly', 'Solyc09g057590.3' => 'sly', 'Solyc09g057600.1' => 'sly', 'Solyc10g009050.3' => 'sly', 'Solyc11g017420.2' => 'sly', 'Sopen01g053810' => 'spe', 'Sopen02g023040' => 'spe', 'Sopen03g002440' => 'spe', 'Sopen04g033350' => 'spe', 'Sopen05g003310' => 'spe', 'Sopen07g004050' => 'spe', 'Sopen07g031340' => 'spe', 'Sopen08g006990' => 'spe', 'Sopen10g004830' => 'spe', 'Sopen11g009370' => 'spe', 'Sp1g24450' => 'spa', 'Sp1g29670' => 'spa', 'Sp1g39600' => 'spa', 'Sp2g11080' => 'spa', 'Sp2g13970' => 'spa', 'Sp4g16130' => 'spa', 'Sp6g13080' => 'spa', 'Sp7g37270' => 'spa', 'TAR371G0065' => 'tar', 'TAR376G0340' => 'tar', 'TAR376G0435' => 'tar', 'TAR381G0002' => 'tar', 'TAR381G1236' => 'tar', 'TAR624G0055' => 'tar', 'TAR624G0324' => 'tar', 'TAR624G0696' => 'tar', 'TAR624G0906' => 'tar', 'TAR625G0107' => 'tar', 'TAR626G0015' => 'tar', 'TAR626G1356' => 'tar', 'TAR627G0888' => 'tar', 'TAR628G0399' => 'tar', 'TAR628G1327' => 'tar', 'TAR629G2831' => 'tar', 'TAR629G2874' => 'tar', 'TAR633G1432' => 'tar', 'TAR633G2771' => 'tar', 'THA.LOC104803394' => 'tha', 'THA.LOC104805153' => 'tha', 'THA.LOC104806784' => 'tha', 'THA.LOC104810473' => 'tha', 'THA.LOC104813100' => 'tha', 'THA.LOC104814215' => 'tha', 'THA.LOC104815554' => 'tha', 'THA.LOC104820544' => 'tha', 'THA.LOC104824754' => 'tha', 'THA.LOC104827717' => 'tha', 'Thecc.02G031400' => 'tca', 'Thecc.02G055900' => 'tca', 'Thecc.02G350800' => 'tca', 'Thecc.06G150900' => 'tca', 'Thecc.06G186600' => 'tca', 'Thecc.07G089600' => 'tca', 'Thecc.08G020400' => 'tca', 'Thecc.08G182100' => 'tca', 'Thhalv10000873m.g' => 'esa', 'Thhalv10004185m.g' => 'esa', 'Thhalv10006981m.g' => 'esa', 'Thhalv10007204m.g' => 'esa', 'Thhalv10011374m.g' => 'esa', 'Thhalv10013482m.g' => 'esa', 'Thhalv10017801m.g' => 'esa', 'Thhalv10024983m.g' => 'esa', 'TPR.G12072' => 'tpr', 'TPR.G15769' => 'tpr', 'TPR.G16504' => 'tpr', 'TPR.G16506' => 'tpr', 'TPR.G24345' => 'tpr', 'TPR.G26666' => 'tpr', 'TPR.G27320' => 'tpr', 'TPR.G31819' => 'tpr', 'TPR.G38879' => 'tpr', 'TPR.G39015' => 'tpr', 'TPR.G8819' => 'tpr', 'TWI09G0924' => 'twi', 'TWI12G0811' => 'twi', 'TWI12G1294' => 'twi', 'TWI31G0150' => 'twi', 'TWI36G1262' => 'twi', 'TWI38G1287' => 'twi', 'TWI38G1633' => 'twi', 'TWI38G1982' => 'twi', 'TWI39G0116' => 'twi', 'TWI60G1011' => 'twi', 'TWI63G0171' => 'twi', 'TWI73G0839' => 'twi', 'TWI79G1511' => 'twi', 'unitig_0.g915' => 'ugi', 'unitig_0.g916' => 'ugi', 'unitig_21.g20219' => 'ugi', 'unitig_21.g20416' => 'ugi', 'unitig_578.g16132' => 'ugi', 'unitig_578.g16718' => 'ugi', 'unitig_62.g23481' => 'ugi', 'unitig_744.g24535' => 'ugi', 'unitig_749.g13525' => 'ugi', 'vmacro01248' => 'vma', 'vmacro02290' => 'vma', 'vmacro10946' => 'vma', 'vmacro11865' => 'vma', 'vmacro12493' => 'vma', 'vmacro17322' => 'vma', 'vmacro21599' => 'vma', 'vmacro23041' => 'vma', 'VMungo0251G0004' => 'vmu', 'VMungo0251G2639' => 'vmu', 'VMungo0251G2967' => 'vmu', 'VMungo0540G0864' => 'vmu', 'VMungo0540G1569' => 'vmu', 'VMungo0647G0317' => 'vmu', 'VMungo0720G1373' => 'vmu', 'VMungo0720G1508' => 'vmu', 'VMungo1080G0485' => 'vmu', 'VMungo1215G3177' => 'vmu', 'Zm00001eb112600' => 'zma', 'Zm00001eb120220' => 'zma', 'Zm00001eb153240' => 'zma', 'Zm00001eb168880' => 'zma', 'Zm00001eb213920' => 'zma', 'Zm00001eb228280' => 'zma', 'Zm00001eb254580' => 'zma', 'Zm00001eb272180' => 'zma', 'Zm00001eb293190' => 'zma', 'Zm00001eb322930' => 'zma', 'Zm00001eb353360' => 'zma', 'Zm00001eb353390' => 'zma', 'Zm00001eb353430' => 'zma', 'Zm00001eb353440' => 'zma', 'Zm00001eb353780' => 'zma' ), 'gf_id' => 'HOM05D000499', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000499' ), 'data_identifier' => 'HOM05D000499', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000499', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1066', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p29780' => 'bna', 'A02p33180' => 'bna', 'A03p16470' => 'bna', 'A03p66010' => 'bna', 'A04p25970' => 'bna', 'A06p01270' => 'bna', 'A06p46080' => 'bna', 'A07p11400' => 'bna', 'A08p01840' => 'bna', 'A08p08230' => 'bna', 'A08p25740' => 'bna', 'A09p32070' => 'bna', 'A09p37830' => 'bna', 'A09p42840' => 'bna', 'A09p42850' => 'bna', 'Aa31LG10G2060' => 'aar', 'Aa31LG2G7410' => 'aar', 'Aa31LG6G10200' => 'aar', 'Aa31LG6G16680' => 'aar', 'Aa31LG6G8470' => 'aar', 'Aa31LG9G12730' => 'aar', 'Aa31LG9G13680' => 'aar', 'Aa31LG9G14920' => 'aar', 'Aa31LG9G6650' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4977' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5467' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3254' => 'aag', 'Actinidia02578' => 'ach', 'Actinidia07693' => 'ach', 'Actinidia08413' => 'ach', 'Actinidia08414' => 'ach', 'Actinidia15289' => 'ach', 'Actinidia19871' => 'ach', 'Actinidia21475' => 'ach', 'Actinidia22576' => 'ach', 'Actinidia28327' => 'ach', 'Actinidia32491' => 'ach', 'Actinidia39463' => 'ach', 'Actinidia39571' => 'ach', 'Ah.01g013750' => 'amhyb', 'Ah.01g023210' => 'amhyb', 'Ah.04g164850' => 'amhyb', 'Ah.05g178060' => 'amhyb', 'Ah.07g204270' => 'amhyb', 'Ah.07g208480' => 'amhyb', 'Ah.09g237410' => 'amhyb', 'Ah.14g089460' => 'amhyb', 'AL1G41790' => 'aly', 'AL1G49050' => 'aly', 'AL1G53810' => 'aly', 'AL1G61400' => 'aly', 'AL4G18580' => 'aly', 'AL5G12510' => 'aly', 'AL5G12540' => 'aly', 'AL6G43230' => 'aly', 'AL7G10370' => 'aly', 'AL7G19250' => 'aly', 'AL8G12240' => 'aly', 'AL8G18540' => 'aly', 'Aqoxy1G02409' => 'aox', 'Aqoxy2G03993' => 'aox', 'Aqoxy3G03357' => 'aox', 'Aqoxy4G00785' => 'aox', 'Aqoxy5G02598' => 'aox', 'Aqoxy6G00132' => 'aox', 'Aqoxy7G01776' => 'aox', 'Aqoxy7G02316' => 'aox', 'Aqoxy7G03973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.12AFKW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B8730' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27IQR1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3F75VG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3RE0GA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41TCQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.527VTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FIR39' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5W8UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DA38EV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ63HS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H1I32C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HC27T5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4M8AP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7N3CZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9UVDZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LS1NQA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT1D4B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SKC4TM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCFV76' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF9Q1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQWD9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1ZM88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WE07RT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YCK7VH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJE6Q6' => 'arhy', 'AT1G28240' => 'ath', 'AT1G34550' => 'ath', 'AT1G53040' => 'ath', 'AT2G02910' => 'ath', 'AT4G09630' => 'ath', 'AT4G38500' => 'ath', 'AT5G42660' => 'ath', 'AT5G46220' => 'ath', 'ATR0152G026' => 'atr', 'ATR0564G343' => 'atr', 'ATR0706G151' => 'atr', 'ATR0733G207' => 'atr', 'ATR0751G234' => 'atr', 'ATR0807G048' => 'atr', 'ATR1091G084' => 'atr', 'Atru.chr10.1229' => 'acertr', 'Atru.chr10.1230' => 'acertr', 'Atru.chr10.1874' => 'acertr', 'Atru.chr11.1808' => 'acertr', 'Atru.chr13.1795' => 'acertr', 'Atru.chr13.570' => 'acertr', 'Atru.chr2.2608' => 'acertr', 'Atru.chr2.2609' => 'acertr', 'Atru.chr5.3428' => 'acertr', 'Atru.chr8.1171' => 'acertr', 'AUR62004651' => 'cqu', 'AUR62008675' => 'cqu', 'AUR62010014' => 'cqu', 'AUR62013004' => 'cqu', 'AUR62014825' => 'cqu', 'AUR62015015' => 'cqu', 'AUR62015151' => 'cqu', 'AUR62017020' => 'cqu', 'AUR62019422' => 'cqu', 'AUR62023570' => 'cqu', 'AUR62025571' => 'cqu', 'AUR62029098' => 'cqu', 'AUR62033863' => 'cqu', 'AUR62034296' => 'cqu', 'AUR62040075' => 'cqu', 'BcaB02g07334' => 'bca', 'BcaB02g10575' => 'bca', 'BcaB03g12119' => 'bca', 'BcaB03g12120' => 'bca', 'BcaB03g13945' => 'bca', 'BcaB04g17123' => 'bca', 'BcaB04g17867' => 'bca', 'BcaB04g19839' => 'bca', 'BcaB07g30317' => 'bca', 'BcaB07g32432' => 'bca', 'BcaB07g33362' => 'bca', 'BcaB08g36611' => 'bca', 'BcaC01g00028' => 'bca', 'BcaC01g01356' => 'bca', 'BcaC01g02034' => 'bca', 'BcaC01g06051' => 'bca', 'BcaC03g16839' => 'bca', 'BcaC03g17176' => 'bca', 'BcaC05g26829' => 'bca', 'BcaC06g31490' => 'bca', 'BcaC06g35344' => 'bca', 'BcaC06g36570' => 'bca', 'BcaC07g37537' => 'bca', 'BcaC08g43491' => 'bca', 'BcaC08g43773' => 'bca', 'BcaNung00234' => 'bca', 'BcaNung01982' => 'bca', 'BcaNung03707' => 'bca', 'BcaNung06454' => 'bca', 'BolC2t10762H' => 'bol', 'BolC2t11191H' => 'bol', 'BolC3t14322H' => 'bol', 'BolC3t19747H' => 'bol', 'BolC3t21425H' => 'bol', 'BolC4t27800H' => 'bol', 'BolC5t31423H' => 'bol', 'BolC6t35951H' => 'bol', 'BolC6t36282H' => 'bol', 'BolC7t40678H' => 'bol', 'BolC7t40679H' => 'bol', 'BolC7t42222H' => 'bol', 'BolC7t43492H' => 'bol', 'BolC7t46785H' => 'bol', 'BolC8t47853H' => 'bol', 'BolC9t56805H' => 'bol', 'BraA02t08000Z' => 'bra', 'BraA02t08341Z' => 'bra', 'BraA03t10936Z' => 'bra', 'BraA03t15657Z' => 'bra', 'BraA04t18100Z' => 'bra', 'BraA05t20523Z' => 'bra', 'BraA06t23353Z' => 'bra', 'BraA06t27473Z' => 'bra', 'BraA06t27769Z' => 'bra', 'BraA07t28928Z' => 'bra', 'BraA08t32236Z' => 'bra', 'BraA08t32841Z' => 'bra', 'BraA08t34524Z' => 'bra', 'BraA09t38742Z' => 'bra', 'BraA09t39295Z' => 'bra', 'C02p47180' => 'bna', 'C02p50990' => 'bna', 'C03p19360' => 'bna', 'C03p74950' => 'bna', 'C03p91000' => 'bna', 'C04p63260' => 'bna', 'C05p27050' => 'bna', 'C06p08750' => 'bna', 'C06p11490' => 'bna', 'C07p02820' => 'bna', 'C07p17180' => 'bna', 'C07p29440' => 'bna', 'C07p63730' => 'bna', 'C09p39260' => 'bna', 'CAN.G1164.34' => 'can', 'CAN.G1164.39' => 'can', 'CAN.G1530.3' => 'can', 'CAN.G162.61' => 'can', 'CAN.G176.6' => 'can', 'CAN.G289.49' => 'can', 'CAN.G370.21' => 'can', 'CAN.G370.22' => 'can', 'CAN.G371.117' => 'can', 'CAN.G58.37' => 'can', 'CAN.G588.98' => 'can', 'CANSAT21G2266' => 'cansat', 'CANSAT25G2799' => 'cansat', 'CANSAT35G0862' => 'cansat', 'CANSAT35G1704' => 'cansat', 'CANSAT35G1760' => 'cansat', 'CANSAT56G3971' => 'cansat', 'CANSAT56G4116' => 'cansat', 'CANSAT80G1259' => 'cansat', 'CARHR027730' => 'chi', 'CARHR033880' => 'chi', 'CARHR043270' => 'chi', 'CARHR145330' => 'chi', 'CARHR145340' => 'chi', 'CARHR175570' => 'chi', 'CARHR181570' => 'chi', 'CARHR258470' => 'chi', 'CARHR260490' => 'chi', 'CARHR294220' => 'chi', 'Carub.0001s2668' => 'cru', 'Carub.0001s3257' => 'cru', 'Carub.0001s4220' => 'cru', 'Carub.0005s0179' => 'cru', 'Carub.0006s2807' => 'cru', 'Carub.0007s0039' => 'cru', 'Carub.0008s0169' => 'cru', 'Carub.0008s0636' => 'cru', 'Ca_00338_v3' => 'car', 'Ca_00542_v3' => 'car', 'Ca_01844_v3' => 'car', 'Ca_10611_v3' => 'car', 'Ca_13326_v3' => 'car', 'Ca_17944_v3' => 'car', 'Ca_18546_v3' => 'car', 'Ca_24219_v3' => 'car', 'Ca_29972_v3' => 'car', 'CBR_g3681' => 'cbr', 'CBR_g40021' => 'cbr', 'Cc01_g08140' => 'ccan', 'Cc02_g13410' => 'ccan', 'Cc02_g37480' => 'ccan', 'Cc05_g12030' => 'ccan', 'Cc09_g03370' => 'ccan', 'Cc09_g10300' => 'ccan', 'Cc10_g03530' => 'ccan', 'Cc10_g11380' => 'ccan', 'CDE01G0176' => 'cde', 'CDE02G0675' => 'cde', 'CDE02G0942' => 'cde', 'CDE02G1153' => 'cde', 'CDE02G4177' => 'cde', 'CDE04G2117' => 'cde', 'CDE04G2736' => 'cde', 'CDE08G1161' => 'cde', 'CDE09G1238' => 'cde', 'Cfa000467' => 'cfa', 'Cfa000947' => 'cfa', 'Cfa004969' => 'cfa', 'Cfa005284' => 'cfa', 'Cfa008993' => 'cfa', 'Cfa018187' => 'cfa', 'Cfa018454' => 'cfa', 'Cfa020585' => 'cfa', 'Ciclev10000424m.g' => 'ccl', 'Ciclev10003605m.g' => 'ccl', 'Ciclev10007828m.g' => 'ccl', 'Ciclev10014620m.g' => 'ccl', 'Ciclev10015169m.g' => 'ccl', 'Ciclev10018291m.g' => 'ccl', 'Ciclev10028256m.g' => 'ccl', 'Ciclev10033822m.g' => 'ccl', 'CiPaw.05G060300' => 'cil', 'CiPaw.05G085000' => 'cil', 'CiPaw.06G083700' => 'cil', 'CiPaw.06G120300' => 'cil', 'CiPaw.09G060500' => 'cil', 'CiPaw.09G123800' => 'cil', 'CiPaw.11G169700' => 'cil', 'CiPaw.12G118300' => 'cil', 'CiPaw.15G071000' => 'cil', 'CiPaw.15G081900' => 'cil', 'ClCG01G024610' => 'cla', 'ClCG03G006070' => 'cla', 'ClCG05G019250' => 'cla', 'ClCG09G009500' => 'cla', 'ClCG11G008200' => 'cla', 'ClCG11G018080' => 'cla', 'COL.COLO4_17373' => 'col', 'COL.COLO4_22994' => 'col', 'COL.COLO4_26389' => 'col', 'COL.COLO4_27170' => 'col', 'COL.COLO4_31074' => 'col', 'COL.COLO4_31465' => 'col', 'COL.COLO4_36438' => 'col', 'COL.COLO4_36439' => 'col', 'Cpa.g.c38781' => 'cpa', 'Cpa.g.sc128.12' => 'cpa', 'Cpa.g.sc166.7' => 'cpa', 'Cpa.g.sc166.8' => 'cpa', 'Cpa.g.sc20.111' => 'cpa', 'Cpa.g.sc27.31' => 'cpa', 'Cpa.g.sc64.36' => 'cpa', 'Cpa.g.sc64.37' => 'cpa', 'Cpa.g.sc66.49' => 'cpa', 'Cpa.g.sc80.64' => 'cpa', 'CsaV3_1G012320' => 'csa', 'CsaV3_2G008480' => 'csa', 'CsaV3_2G033450' => 'csa', 'CsaV3_3G044830' => 'csa', 'CsaV3_4G033710' => 'csa', 'CsaV3_6G051730' => 'csa', 'CsaV3_7G025350' => 'csa', 'CSS0001067' => 'camsi', 'CSS0005996' => 'camsi', 'CSS0006590' => 'camsi', 'CSS0009673' => 'camsi', 'CSS0010201' => 'camsi', 'CSS0010549' => 'camsi', 'CSS0011364' => 'camsi', 'CSS0014473' => 'camsi', 'CSS0014961' => 'camsi', 'CSS0020191' => 'camsi', 'CSS0021165' => 'camsi', 'CSS0022306' => 'camsi', 'CSS0030591' => 'camsi', 'CSS0030696' => 'camsi', 'CSS0032653' => 'camsi', 'CSS0037487' => 'camsi', 'CSS0041102' => 'camsi', 'CSS0041261' => 'camsi', 'CSS0046246' => 'camsi', 'CSS0049256' => 'camsi', 'DCAR_004075' => 'dca', 'DCAR_011538' => 'dca', 'DCAR_019553' => 'dca', 'DCAR_020952' => 'dca', 'DCAR_021739' => 'dca', 'DCAR_027407' => 'dca', 'DCAR_027913' => 'dca', 'DCAR_028066' => 'dca', 'Dinv05899' => 'din', 'Dinv07563' => 'din', 'Dinv08010' => 'din', 'Dinv14125' => 'din', 'Dinv20172' => 'din', 'Dinv30743' => 'din', 'Dinv31229' => 'din', 'Dinv34162' => 'din', 'Dinv36028' => 'din', 'Dinv39368' => 'din', 'Dinv40565' => 'din', 'Dinv41706' => 'din', 'Duzib052G0089' => 'dzi', 'Duzib116G0641' => 'dzi', 'Duzib132G0069' => 'dzi', 'Duzib132G1219' => 'dzi', 'Duzib147G0278' => 'dzi', 'Duzib160G0480' => 'dzi', 'Duzib170G0661' => 'dzi', 'Duzib177G0591' => 'dzi', 'Duzib187G1353' => 'dzi', 'Duzib192G0858' => 'dzi', 'Duzib192G0883' => 'dzi', 'Duzib213G0506' => 'dzi', 'Duzib235G0289' => 'dzi', 'Duzib251G0422' => 'dzi', 'ECA232G3898' => 'eca', 'ECA233G5950' => 'eca', 'ECA234G1699' => 'eca', 'ECA234G2421' => 'eca', 'ECA236G0426' => 'eca', 'ECA236G4331' => 'eca', 'ECA248G2573' => 'eca', 'EL10Ac1g00077' => 'bvu', 'EL10Ac1g01746' => 'bvu', 'EL10Ac2g03464' => 'bvu', 'EL10Ac4g08176' => 'bvu', 'EL10Ac7g17521' => 'bvu', 'EL10Ac8g20386' => 'bvu', 'EL10Ac9g21343' => 'bvu', 'EL10Ac9g22688' => 'bvu', 'Eucgr.B03434' => 'egr', 'Eucgr.D00618' => 'egr', 'Eucgr.E02395' => 'egr', 'Eucgr.F01129' => 'egr', 'Eucgr.F02622' => 'egr', 'Eucgr.F04207' => 'egr', 'FAN01G0570' => 'fan', 'FAN03G3351' => 'fan', 'FAN06G3702' => 'fan', 'FAN07G2149' => 'fan', 'FAN10G3758' => 'fan', 'FAN11G1170' => 'fan', 'FAN11G2050' => 'fan', 'FAN11G2724' => 'fan', 'FAN12G1700' => 'fan', 'FAN12G2028' => 'fan', 'FAN15G1160' => 'fan', 'FAN15G3063' => 'fan', 'FAN16G2540' => 'fan', 'FAN16G3077' => 'fan', 'FAN16G3624' => 'fan', 'FAN17G0221' => 'fan', 'FAN20G2492' => 'fan', 'FAN20G2905' => 'fan', 'FAN21G0548' => 'fan', 'FAN21G1300' => 'fan', 'FAN22G0077' => 'fan', 'FAN22G1315' => 'fan', 'FAN24G1280' => 'fan', 'FAN24G1445' => 'fan', 'FAN24G3527' => 'fan', 'FAN25G0464' => 'fan', 'FAN25G2885' => 'fan', 'FAN25G3270' => 'fan', 'FAN27G1101' => 'fan', 'FAN27G2846' => 'fan', 'FAN27G3524' => 'fan', 'FvH4_2g11770' => 'fve', 'FvH4_2g15630' => 'fve', 'FvH4_3g05570' => 'fve', 'FvH4_3g09110' => 'fve', 'FvH4_3g19940' => 'fve', 'FvH4_4g04821' => 'fve', 'FvH4_4g31480' => 'fve', 'FvH4_7g01740' => 'fve', 'Glyma.05G130400' => 'gma', 'Glyma.05G156400' => 'gma', 'Glyma.07G197000' => 'gma', 'Glyma.08G085151' => 'gma', 'Glyma.08G114500' => 'gma', 'Glyma.08G300400' => 'gma', 'Glyma.10G215800' => 'gma', 'Glyma.12G224400' => 'gma', 'Glyma.13G179300' => 'gma', 'Glyma.13G218151' => 'gma', 'Glyma.13G238800' => 'gma', 'Glyma.13G276900' => 'gma', 'Glyma.14G078200' => 'gma', 'Glyma.15G074500' => 'gma', 'Glyma.15G094100' => 'gma', 'Glyma.17G247200' => 'gma', 'Glyma.18G120100' => 'gma', 'Glyma.20G176000' => 'gma', 'Gohir.A01G063600' => 'ghi', 'Gohir.A01G170301' => 'ghi', 'Gohir.A02G060500' => 'ghi', 'Gohir.A05G133850' => 'ghi', 'Gohir.A05G161400' => 'ghi', 'Gohir.A06G012900' => 'ghi', 'Gohir.A06G035901' => 'ghi', 'Gohir.A06G127100' => 'ghi', 'Gohir.A06G210500' => 'ghi', 'Gohir.A08G008650' => 'ghi', 'Gohir.A09G072700' => 'ghi', 'Gohir.A09G088301' => 'ghi', 'Gohir.A10G040600' => 'ghi', 'Gohir.A12G036300' => 'ghi', 'Gohir.A12G143350' => 'ghi', 'Gohir.A12G165500' => 'ghi', 'Gohir.A13G145700' => 'ghi', 'Gohir.D01G050000' => 'ghi', 'Gohir.D01G051366' => 'ghi', 'Gohir.D01G161350' => 'ghi', 'Gohir.D02G065900' => 'ghi', 'Gohir.D05G164200' => 'ghi', 'Gohir.D05G355500' => 'ghi', 'Gohir.D06G010400' => 'ghi', 'Gohir.D06G111250' => 'ghi', 'Gohir.D06G132000' => 'ghi', 'Gohir.D06G210500' => 'ghi', 'Gohir.D07G165675' => 'ghi', 'Gohir.D08G062240' => 'ghi', 'Gohir.D08G086101' => 'ghi', 'Gohir.D08G138060' => 'ghi', 'Gohir.D09G072300' => 'ghi', 'Gohir.D10G041400' => 'ghi', 'Gohir.D11G191020' => 'ghi', 'Gohir.D11G212066' => 'ghi', 'Gohir.D12G036300' => 'ghi', 'Gohir.D12G168600' => 'ghi', 'Gohir.D13G150600' => 'ghi', 'Gorai.001G057300' => 'gra', 'Gorai.002G069900' => 'gra', 'Gorai.002G200000' => 'gra', 'Gorai.003G067600' => 'gra', 'Gorai.005G074800' => 'gra', 'Gorai.006G087300' => 'gra', 'Gorai.008G037500' => 'gra', 'Gorai.008G181400' => 'gra', 'Gorai.009G169400' => 'gra', 'Gorai.009G387900' => 'gra', 'Gorai.010G013300' => 'gra', 'Gorai.010G153800' => 'gra', 'Gorai.010G255800' => 'gra', 'Gorai.011G043700' => 'gra', 'Gorai.011G198900' => 'gra', 'Gorai.013G168400' => 'gra', 'GSVIVG01005212001' => 'vvi', 'GSVIVG01006163001' => 'vvi', 'GSVIVG01009625001' => 'vvi', 'GSVIVG01014338001' => 'vvi', 'GSVIVG01020005001' => 'vvi', 'GSVIVG01021450001' => 'vvi', 'GSVIVG01023975001' => 'vvi', 'GSVIVG01034490001' => 'vvi', 'HanXRQChr04g0112071' => 'han', 'HanXRQChr05g0131151' => 'han', 'HanXRQChr09g0262371' => 'han', 'HanXRQChr09g0268401' => 'han', 'HanXRQChr10g0279241' => 'han', 'HanXRQChr10g0297961' => 'han', 'HanXRQChr11g0326231' => 'han', 'HanXRQChr11g0328471' => 'han', 'HanXRQChr16g0507941' => 'han', 'HanXRQChr17g0560211' => 'han', 'Haze_02108' => 'cav', 'Haze_02428' => 'cav', 'Haze_05593' => 'cav', 'Haze_06448' => 'cav', 'Haze_09427' => 'cav', 'Haze_12022' => 'cav', 'Haze_17612' => 'cav', 'Haze_17928' => 'cav', 'Hma1.2p1_0032F.1_g019250' => 'hma', 'Hma1.2p1_0163F.1_g072690' => 'hma', 'Hma1.2p1_0265F.1_g106710' => 'hma', 'Hma1.2p1_0286F.1_g113970' => 'hma', 'Hma1.2p1_0363F.1_g136640' => 'hma', 'Hma1.2p1_0584F.1_g183470' => 'hma', 'Hma1.2p1_0885F.1_g232570' => 'hma', 'HPP92_006022' => 'vpl', 'HPP92_007320' => 'vpl', 'HPP92_011521' => 'vpl', 'HPP92_019387' => 'vpl', 'HPP92_024038' => 'vpl', 'Hund05891' => 'sun', 'Hund06450' => 'sun', 'Hund12053' => 'sun', 'Hund16800' => 'sun', 'Hund21222' => 'sun', 'Hund22896' => 'sun', 'Hund23746' => 'sun', 'Hund27083' => 'sun', 'Lalb_Chr02g0141831' => 'lal', 'Lalb_Chr02g0141841' => 'lal', 'Lalb_Chr05g0220411' => 'lal', 'Lalb_Chr06g0162081' => 'lal', 'Lalb_Chr09g0327651' => 'lal', 'Lalb_Chr13g0295051' => 'lal', 'Lalb_Chr15g0086801' => 'lal', 'Lalb_Chr16g0383781' => 'lal', 'Lalb_Chr16g0383791' => 'lal', 'Lalb_Chr18g0055441' => 'lal', 'Lalb_Chr18g0059611' => 'lal', 'Lalb_Chr20g0109661' => 'lal', 'Lalb_Chr20g0109831' => 'lal', 'Lalb_Chr20g0121871' => 'lal', 'Lalb_Chr22g0355361' => 'lal', 'Lalb_Chr25g0286371' => 'lal', 'Lj1A1187G43' => 'lonja', 'Lj1A1205T50' => 'lonja', 'Lj1A800G33' => 'lonja', 'Lj1C1187T7' => 'lonja', 'Lj1C843T11' => 'lonja', 'Lj1g0010940' => 'lja', 'Lj2A288T69' => 'lonja', 'Lj3g0024276' => 'lja', 'Lj4A47T76' => 'lonja', 'Lj4g0005805' => 'lja', 'Lj4g0006097' => 'lja', 'Lj4g0008528' => 'lja', 'Lj4g0024907' => 'lja', 'Lj5g0012472' => 'lja', 'Lj5g0018648' => 'lja', 'Lj6C789G1' => 'lonja', 'Lj6g0004000' => 'lja', 'Lj7A292G67' => 'lonja', 'Lj7A292T64' => 'lonja', 'Lj9A400T58' => 'lonja', 'Lsat_1_v5_gn_1_126181' => 'lsa', 'Lsat_1_v5_gn_4_123041' => 'lsa', 'Lsat_1_v5_gn_4_133620' => 'lsa', 'Lsat_1_v5_gn_4_53221' => 'lsa', 'Lsat_1_v5_gn_4_71961' => 'lsa', 'Lsat_1_v5_gn_7_105241' => 'lsa', 'Lsat_1_v5_gn_7_21361' => 'lsa', 'Lsat_1_v5_gn_7_28860' => 'lsa', 'Lsat_1_v5_gn_7_31260' => 'lsa', 'Lsat_1_v5_gn_8_52801' => 'lsa', 'Manes.02G191400' => 'mes', 'Manes.03G110100' => 'mes', 'Manes.04G071100' => 'mes', 'Manes.05G100500' => 'mes', 'Manes.05G164700' => 'mes', 'Manes.15G087000' => 'mes', 'Manes.15G121500' => 'mes', 'Manes.16G028300' => 'mes', 'Manes.17G046100' => 'mes', 'Manes.17G069800' => 'mes', 'Manes.18G100500' => 'mes', 'Mapoly0002s0109' => 'mpo', 'Mapoly0024s0007' => 'mpo', 'Mapoly0089s0032' => 'mpo', 'MBI04_g42241_MAGBIO' => 'mbi', 'MBI05_g11988_MAGBIO' => 'mbi', 'MBI05_g35452_MAGBIO' => 'mbi', 'MBI07_g30179_MAGBIO' => 'mbi', 'MBI07_g35859_MAGBIO' => 'mbi', 'MBI07_g35860_MAGBIO' => 'mbi', 'MBI07_g37166_MAGBIO' => 'mbi', 'MBI08_g18172_MAGBIO' => 'mbi', 'MBI09_g08441_MAGBIO' => 'mbi', 'MBI13_g01676_MAGBIO' => 'mbi', 'MBI14_g42955_MAGBIO' => 'mbi', 'MBI16_g13161_MAGBIO' => 'mbi', 'MBI17_g27204_MAGBIO' => 'mbi', 'MBI19_g21595_MAGBIO' => 'mbi', 'MD00G1148400' => 'mdo', 'MD02G1301200' => 'mdo', 'MD03G1227800' => 'mdo', 'MD05G1041100' => 'mdo', 'MD05G1124800' => 'mdo', 'MD05G1284000' => 'mdo', 'MD05G1338800' => 'mdo', 'MD05G1338900' => 'mdo', 'MD07G1022800' => 'mdo', 'MD10G1047500' => 'mdo', 'MD10G1127500' => 'mdo', 'MD10G1262300' => 'mdo', 'MD10G1293800' => 'mdo', 'MD16G1074300' => 'mdo', 'Medtr1g021670' => 'mtr', 'Medtr1g096320' => 'mtr', 'Medtr2g013690' => 'mtr', 'Medtr2g019450' => 'mtr', 'Medtr2g085170' => 'mtr', 'Medtr4g088785' => 'mtr', 'Medtr8g055930' => 'mtr', 'Medtr8g085850' => 'mtr', 'MELO3C002605.2' => 'cme', 'MELO3C003891.2' => 'cme', 'MELO3C004012.2' => 'cme', 'MELO3C007134.2' => 'cme', 'MELO3C008118.2' => 'cme', 'MELO3C016700.2' => 'cme', 'MELO3C024127.2' => 'cme', 'MELO3C033361.2' => 'cme', 'MELO3C033362.2' => 'cme', 'Migut.C00430' => 'egut', 'Migut.C01246' => 'egut', 'Migut.E00101' => 'egut', 'Migut.H01486' => 'egut', 'Migut.H01939' => 'egut', 'Migut.K00360' => 'egut', 'Migut.M00910' => 'egut', 'Migut.M01139' => 'egut', 'Migut.N02677' => 'egut', 'MSTRG.13252' => 'ama', 'MSTRG.14701' => 'ama', 'MSTRG.1521' => 'ama', 'MSTRG.15884' => 'ama', 'MSTRG.16242' => 'ama', 'MSTRG.22285' => 'ama', 'MSTRG.22444' => 'ama', 'MSTRG.2349' => 'ama', 'MSTRG.26308' => 'ama', 'MSTRG.28296' => 'ama', 'MSTRG.9895' => 'ama', 'Nitab4.5_0000110g0060' => 'nta', 'Nitab4.5_0000420g0130' => 'nta', 'Nitab4.5_0000422g0030' => 'nta', 'Nitab4.5_0000560g0180' => 'nta', 'Nitab4.5_0000703g0100' => 'nta', 'Nitab4.5_0000786g0200' => 'nta', 'Nitab4.5_0001336g0020' => 'nta', 'Nitab4.5_0001796g0030' => 'nta', 'Nitab4.5_0003348g0060' => 'nta', 'Nitab4.5_0003698g0040' => 'nta', 'Nitab4.5_0003942g0090' => 'nta', 'Nitab4.5_0004775g0070' => 'nta', 'Nitab4.5_0004864g0030' => 'nta', 'Nitab4.5_0005615g0020' => 'nta', 'Nitab4.5_0009288g0030' => 'nta', 'Nitab4.5_0009341g0010' => 'nta', 'Nitab4.5_0009535g0010' => 'nta', 'Nn1g03995' => 'nnu', 'Nn1g04100' => 'nnu', 'Nn1g06530' => 'nnu', 'Nn3g16404' => 'nnu', 'Nn3g17212' => 'nnu', 'Nn3g20776' => 'nnu', 'Nn3g21923' => 'nnu', 'Nn5g27737' => 'nnu', 'Nn5g29461' => 'nnu', 'Nn7g38355' => 'nnu', 'Nn8g39873' => 'nnu', 'Oeu000548.2' => 'oeu', 'Oeu004672.1' => 'oeu', 'Oeu015605.2' => 'oeu', 'Oeu016092.1' => 'oeu', 'Oeu017879.3' => 'oeu', 'Oeu024910.1' => 'oeu', 'Oeu028965.1' => 'oeu', 'Oeu031269.1' => 'oeu', 'Oeu031270.1' => 'oeu', 'Oeu032535.1' => 'oeu', 'Oeu034151.1' => 'oeu', 'Oeu034152.1' => 'oeu', 'Oeu034588.2' => 'oeu', 'Oeu050846.1' => 'oeu', 'Oeu050849.2' => 'oeu', 'Oeu051063.2' => 'oeu', 'Oeu052368.1' => 'oeu', 'Oeu052370.1' => 'oeu', 'Os01g0210400' => 'osa', 'Os01g0304300' => 'osa', 'Os01g0749100' => 'osa', 'Os02g0745800' => 'osa', 'Os03g0769050' => 'osa', 'Os05g0531500' => 'osa', 'Os06g0724300' => 'osa', 'Os11g0198100' => 'osa', 'Peaxi162Scf00069g01425' => 'pax', 'Peaxi162Scf00280g00811' => 'pax', 'Peaxi162Scf00310g00615' => 'pax', 'Peaxi162Scf00362g00542' => 'pax', 'Peaxi162Scf00461g00310' => 'pax', 'Peaxi162Scf00530g00118' => 'pax', 'Peaxi162Scf00541g00057' => 'pax', 'Peaxi162Scf00661g00017' => 'pax', 'Peaxi162Scf00926g00027' => 'pax', 'Peaxi162Scf01064g00263' => 'pax', 'Peaxi162Scf01211g00135' => 'pax', 'PGR004G2336' => 'pgr', 'PGR042G0327' => 'pgr', 'PGR042G1957' => 'pgr', 'PGR042G2003' => 'pgr', 'PGR042G3929' => 'pgr', 'PGR083G1137' => 'pgr', 'PGR083G1364' => 'pgr', 'PGSC0003DMG400003381' => 'stu', 'PGSC0003DMG400003417' => 'stu', 'PGSC0003DMG400008981' => 'stu', 'PGSC0003DMG400012417' => 'stu', 'PGSC0003DMG400012823' => 'stu', 'PGSC0003DMG400016885' => 'stu', 'PGSC0003DMG400022812' => 'stu', 'PGSC0003DMG400029726' => 'stu', 'PGSC0003DMG401009243' => 'stu', 'PGSC0003DMG401031505' => 'stu', 'PGSC0003DMG402031505' => 'stu', 'Phvul.001G017600' => 'pvu', 'Phvul.002G193500' => 'pvu', 'Phvul.002G228900' => 'pvu', 'Phvul.002G236800' => 'pvu', 'Phvul.003G049500' => 'pvu', 'Phvul.005G072000' => 'pvu', 'Phvul.006G164800' => 'pvu', 'Phvul.006G185100' => 'pvu', 'Phvul.007G090000' => 'pvu', 'Potri.001G399800' => 'ptr', 'Potri.002G149900' => 'ptr', 'Potri.004G044100' => 'ptr', 'Potri.004G177600' => 'ptr', 'Potri.009G138000' => 'ptr', 'Potri.010G094000' => 'ptr', 'Potri.011G053000' => 'ptr', 'Potri.011G119300' => 'ptr', 'Potri.013G113700' => 'ptr', 'Potri.018G107800' => 'ptr', 'Potri.019G084100' => 'ptr', 'Pp3c14_23720' => 'ppa', 'Pp3c16_6340' => 'ppa', 'Pp3c23_13420' => 'ppa', 'Pp3c24_2740' => 'ppa', 'Pp3c25_860' => 'ppa', 'Pp3c8_21750' => 'ppa', 'Prupe.1G273000' => 'ppe', 'Prupe.1G273700' => 'ppe', 'Prupe.1G274100' => 'ppe', 'Prupe.2G023300' => 'ppe', 'Prupe.4G048000' => 'ppe', 'Prupe.4G080400' => 'ppe', 'Prupe.4G181200' => 'ppe', 'Prupe.8G056900' => 'ppe', 'Prupe.8G168700' => 'ppe', 'Psat1g189080' => 'psa', 'Psat1g204760' => 'psa', 'Psat4g175560' => 'psa', 'Psat4g177720' => 'psa', 'Psat5g244240' => 'psa', 'Psat6g010720' => 'psa', 'Psat6g187200' => 'psa', 'Psat7g072040' => 'psa', 'PSO017G3501' => 'pso', 'PSO063G2148' => 'pso', 'PSO063G5608' => 'pso', 'PSO210G6392' => 'pso', 'PSO541G2319' => 'pso', 'PSO541G2836' => 'pso', 'PSO541G4012' => 'pso', 'PSO541G6253' => 'pso', 'PSO675G0580' => 'pso', 'PSO675G0856' => 'pso', 'PSO675G5635' => 'pso', 'PSO675G9157' => 'pso', 'PSO832G1660' => 'pso', 'PSO832G1969' => 'pso', 'QL02p007186' => 'qlo', 'QL02p033904' => 'qlo', 'QL03p064391' => 'qlo', 'QL05p040593' => 'qlo', 'QL05p058242' => 'qlo', 'QL08p021825' => 'qlo', 'QL11p004981' => 'qlo', 'RcHm_v2.0_Chr1g0318301' => 'rch', 'RcHm_v2.0_Chr4g0418501' => 'rch', 'RcHm_v2.0_Chr4g0439971' => 'rch', 'RcHm_v2.0_Chr5g0008541' => 'rch', 'RcHm_v2.0_Chr5g0014101' => 'rch', 'RcHm_v2.0_Chr5g0014131' => 'rch', 'RcHm_v2.0_Chr5g0033621' => 'rch', 'RcHm_v2.0_Chr6g0272041' => 'rch', 'RcHm_v2.0_Chr6g0278831' => 'rch', 'Rhsim02G0130400' => 'rsi', 'Rhsim02G0171100' => 'rsi', 'Rhsim05G0053000' => 'rsi', 'Rhsim05G0053100' => 'rsi', 'Rhsim06G0096500' => 'rsi', 'Rhsim06G0096600' => 'rsi', 'Rhsim06G0199100' => 'rsi', 'Rhsim12G0062300' => 'rsi', 'Rhsim12G0062800' => 'rsi', 'Sabra02G0118600' => 'sbr', 'Sabra04G0027300' => 'sbr', 'Sabra04G0119500' => 'sbr', 'Sabra08G0112500' => 'sbr', 'Sabra11G0036800' => 'sbr', 'Sabra11G0103800' => 'sbr', 'Sabra13G0096300' => 'sbr', 'Sabra16G0262300' => 'sbr', 'Sabra18G0091700' => 'sbr', 'Sabra19G0095400' => 'sbr', 'SalBow6G3080' => 'sbo', 'SalBow7G1157' => 'sbo', 'SalBow7G2123' => 'sbo', 'SalBow7G2285' => 'sbo', 'SalBow7G3537' => 'sbo', 'SalBow8G2947' => 'sbo', 'SalBow8G4463' => 'sbo', 'SalBow8G5466' => 'sbo', 'Sc01g0001750' => 'sci', 'Sc02g0006640' => 'sci', 'Sc02g0006670' => 'sci', 'Sc04g0008220' => 'sci', 'Sc05g0006190' => 'sci', 'Sc08g0002760' => 'sci', 'Sc17g0006170' => 'sci', 'Sc22g0002050' => 'sci', 'Sc23g0001190' => 'sci', 'Sc24g0000980' => 'sci', 'Sed0006245' => 'sed', 'Sed0007543' => 'sed', 'Sed0009411' => 'sed', 'Sed0010765' => 'sed', 'Sed0012944' => 'sed', 'Sed0014682' => 'sed', 'Sed0016174' => 'sed', 'Sed0016796' => 'sed', 'Sed0020317' => 'sed', 'Sed0021467' => 'sed', 'SEGI_01316' => 'sgi', 'SEGI_03374' => 'sgi', 'SEGI_16265' => 'sgi', 'SEGI_18569' => 'sgi', 'SEGI_20351' => 'sgi', 'SEGI_26395' => 'sgi', 'SEGI_29469' => 'sgi', 'SEGI_34771' => 'sgi', 'SEGI_36769' => 'sgi', 'SEGI_37139' => 'sgi', 'SGA_v2.0_scaffold100G29687' => 'sas', 'SGA_v2.0_scaffold118G32472' => 'sas', 'SGA_v2.0_scaffold14G07051' => 'sas', 'SGA_v2.0_scaffold183G39845' => 'sas', 'SGA_v2.0_scaffold1G00174' => 'sas', 'SGA_v2.0_scaffold22G09714' => 'sas', 'SGA_v2.0_scaffold333G48992' => 'sas', 'SGA_v2.0_scaffold46G17491' => 'sas', 'SGA_v2.0_scaffold49G18294' => 'sas', 'SGA_v2.0_scaffold63G21658' => 'sas', 'SHI01741' => 'shi', 'SHI05771' => 'shi', 'SHI18077' => 'shi', 'SHI20525' => 'shi', 'SHI20527' => 'shi', 'SHI20528' => 'shi', 'SMO172G0185' => 'smo', 'SMO198G0020' => 'smo', 'SMO351G0006' => 'smo', 'SMO356G0118' => 'smo', 'SMO358G0296' => 'smo', 'SMO367G0079' => 'smo', 'SMO367G1277' => 'smo', 'Solyc01g014220.3' => 'sly', 'Solyc01g111770.2' => 'sly', 'Solyc02g078180.3' => 'sly', 'Solyc03g006430.3' => 'sly', 'Solyc03g006456.1' => 'sly', 'Solyc03g079860.2' => 'sly', 'Solyc04g079770.3' => 'sly', 'Solyc05g007430.4' => 'sly', 'Solyc07g063150.3' => 'sly', 'Solyc08g016620.3' => 'sly', 'Solyc09g057590.3' => 'sly', 'Solyc09g057600.1' => 'sly', 'Solyc10g009050.3' => 'sly', 'Solyc11g017420.2' => 'sly', 'Sopen01g053810' => 'spe', 'Sopen02g023040' => 'spe', 'Sopen03g002440' => 'spe', 'Sopen04g033350' => 'spe', 'Sopen05g003310' => 'spe', 'Sopen07g004050' => 'spe', 'Sopen07g031340' => 'spe', 'Sopen08g006990' => 'spe', 'Sopen10g004830' => 'spe', 'Sopen11g009370' => 'spe', 'Sp1g24450' => 'spa', 'Sp1g29670' => 'spa', 'Sp1g39600' => 'spa', 'Sp2g11080' => 'spa', 'Sp2g13970' => 'spa', 'Sp4g16130' => 'spa', 'Sp6g13080' => 'spa', 'Sp7g37270' => 'spa', 'TAR371G0065' => 'tar', 'TAR376G0340' => 'tar', 'TAR376G0435' => 'tar', 'TAR381G0002' => 'tar', 'TAR381G1236' => 'tar', 'TAR624G0055' => 'tar', 'TAR624G0324' => 'tar', 'TAR624G0696' => 'tar', 'TAR624G0906' => 'tar', 'TAR625G0107' => 'tar', 'TAR626G0015' => 'tar', 'TAR626G1356' => 'tar', 'TAR627G0888' => 'tar', 'TAR628G0399' => 'tar', 'TAR628G1327' => 'tar', 'TAR629G2831' => 'tar', 'TAR629G2874' => 'tar', 'TAR633G1432' => 'tar', 'TAR633G2771' => 'tar', 'THA.LOC104803394' => 'tha', 'THA.LOC104805153' => 'tha', 'THA.LOC104806784' => 'tha', 'THA.LOC104810473' => 'tha', 'THA.LOC104813100' => 'tha', 'THA.LOC104814215' => 'tha', 'THA.LOC104815554' => 'tha', 'THA.LOC104820544' => 'tha', 'THA.LOC104824754' => 'tha', 'THA.LOC104827717' => 'tha', 'Thecc.02G031400' => 'tca', 'Thecc.02G055900' => 'tca', 'Thecc.02G350800' => 'tca', 'Thecc.06G150900' => 'tca', 'Thecc.06G186600' => 'tca', 'Thecc.07G089600' => 'tca', 'Thecc.08G020400' => 'tca', 'Thecc.08G182100' => 'tca', 'Thhalv10000873m.g' => 'esa', 'Thhalv10004185m.g' => 'esa', 'Thhalv10006981m.g' => 'esa', 'Thhalv10007204m.g' => 'esa', 'Thhalv10011374m.g' => 'esa', 'Thhalv10013482m.g' => 'esa', 'Thhalv10017801m.g' => 'esa', 'Thhalv10024983m.g' => 'esa', 'TPR.G12072' => 'tpr', 'TPR.G15769' => 'tpr', 'TPR.G16504' => 'tpr', 'TPR.G16506' => 'tpr', 'TPR.G24345' => 'tpr', 'TPR.G26666' => 'tpr', 'TPR.G27320' => 'tpr', 'TPR.G31819' => 'tpr', 'TPR.G38879' => 'tpr', 'TPR.G39015' => 'tpr', 'TPR.G8819' => 'tpr', 'TWI09G0924' => 'twi', 'TWI12G0811' => 'twi', 'TWI12G1294' => 'twi', 'TWI31G0150' => 'twi', 'TWI36G1262' => 'twi', 'TWI38G1287' => 'twi', 'TWI38G1633' => 'twi', 'TWI38G1982' => 'twi', 'TWI39G0116' => 'twi', 'TWI60G1011' => 'twi', 'TWI63G0171' => 'twi', 'TWI73G0839' => 'twi', 'TWI79G1511' => 'twi', 'unitig_0.g915' => 'ugi', 'unitig_0.g916' => 'ugi', 'unitig_21.g20219' => 'ugi', 'unitig_21.g20416' => 'ugi', 'unitig_578.g16132' => 'ugi', 'unitig_578.g16718' => 'ugi', 'unitig_62.g23481' => 'ugi', 'unitig_744.g24535' => 'ugi', 'unitig_749.g13525' => 'ugi', 'vmacro01248' => 'vma', 'vmacro02290' => 'vma', 'vmacro10946' => 'vma', 'vmacro11865' => 'vma', 'vmacro12493' => 'vma', 'vmacro17322' => 'vma', 'vmacro21599' => 'vma', 'vmacro23041' => 'vma', 'VMungo0251G0004' => 'vmu', 'VMungo0251G2639' => 'vmu', 'VMungo0251G2967' => 'vmu', 'VMungo0540G0864' => 'vmu', 'VMungo0540G1569' => 'vmu', 'VMungo0647G0317' => 'vmu', 'VMungo0720G1373' => 'vmu', 'VMungo0720G1508' => 'vmu', 'VMungo1080G0485' => 'vmu', 'VMungo1215G3177' => 'vmu', 'Zm00001eb112600' => 'zma', 'Zm00001eb120220' => 'zma', 'Zm00001eb153240' => 'zma', 'Zm00001eb168880' => 'zma', 'Zm00001eb213920' => 'zma', 'Zm00001eb228280' => 'zma', 'Zm00001eb254580' => 'zma', 'Zm00001eb272180' => 'zma', 'Zm00001eb293190' => 'zma', 'Zm00001eb322930' => 'zma', 'Zm00001eb353360' => 'zma', 'Zm00001eb353390' => 'zma', 'Zm00001eb353430' => 'zma', 'Zm00001eb353440' => 'zma', 'Zm00001eb353780' => 'zma' ) $gf_id = 'HOM05D000499' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000499' ) $data_identifier = 'HOM05D000499' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 29, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 12, 'amhyb' => (int) 8, 'aly' => (int) 12, 'aox' => (int) 9, 'arhy' => (int) 26, 'ath' => (int) 8, 'atr' => (int) 7, 'acertr' => (int) 10, 'cqu' => (int) 15, 'bca' => (int) 29, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 11, 'cansat' => (int) 8, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 9, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 8, 'cpa' => (int) 10, 'csa' => (int) 7, 'camsi' => (int) 20, 'dca' => (int) 8, 'din' => (int) 12, 'dzi' => (int) 14, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 6, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 38, 'gra' => (int) 16, 'vvi' => (int) 8, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 5, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 11, 'lja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 11, 'mpo' => (int) 3, 'mbi' => (int) 14, 'mdo' => (int) 14, 'mtr' => (int) 8, 'cme' => (int) 9, 'egut' => (int) 9, 'ama' => (int) 11, 'nta' => (int) 17, 'nnu' => (int) 11, 'oeu' => (int) 18, 'osa' => (int) 8, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 6, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 9, 'rsi' => (int) 9, 'sbr' => (int) 10, 'sbo' => (int) 8, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 10, 'sas' => (int) 10, 'shi' => (int) 6, 'smo' => (int) 7, 'sly' => (int) 14, 'spe' => (int) 10, 'spa' => (int) 8, 'tar' => (int) 19, 'tha' => (int) 10, 'tca' => (int) 8, 'esa' => (int) 8, 'tpr' => (int) 11, 'twi' => (int) 13, 'ugi' => (int) 9, 'vma' => (int) 8, 'vmu' => (int) 10, 'zma' => (int) 15 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb353780' $species_info = array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ) $local_species = 'fve' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000499', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1066', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p29780' => 'bna', 'A02p33180' => 'bna', 'A03p16470' => 'bna', 'A03p66010' => 'bna', 'A04p25970' => 'bna', 'A06p01270' => 'bna', 'A06p46080' => 'bna', 'A07p11400' => 'bna', 'A08p01840' => 'bna', 'A08p08230' => 'bna', 'A08p25740' => 'bna', 'A09p32070' => 'bna', 'A09p37830' => 'bna', 'A09p42840' => 'bna', 'A09p42850' => 'bna', 'Aa31LG10G2060' => 'aar', 'Aa31LG2G7410' => 'aar', 'Aa31LG6G10200' => 'aar', 'Aa31LG6G16680' => 'aar', 'Aa31LG6G8470' => 'aar', 'Aa31LG9G12730' => 'aar', 'Aa31LG9G13680' => 'aar', 'Aa31LG9G14920' => 'aar', 'Aa31LG9G6650' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4977' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5467' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3254' => 'aag', 'Actinidia02578' => 'ach', 'Actinidia07693' => 'ach', 'Actinidia08413' => 'ach', 'Actinidia08414' => 'ach', 'Actinidia15289' => 'ach', 'Actinidia19871' => 'ach', 'Actinidia21475' => 'ach', 'Actinidia22576' => 'ach', 'Actinidia28327' => 'ach', 'Actinidia32491' => 'ach', 'Actinidia39463' => 'ach', 'Actinidia39571' => 'ach', 'Ah.01g013750' => 'amhyb', 'Ah.01g023210' => 'amhyb', 'Ah.04g164850' => 'amhyb', 'Ah.05g178060' => 'amhyb', 'Ah.07g204270' => 'amhyb', 'Ah.07g208480' => 'amhyb', 'Ah.09g237410' => 'amhyb', 'Ah.14g089460' => 'amhyb', 'AL1G41790' => 'aly', 'AL1G49050' => 'aly', 'AL1G53810' => 'aly', 'AL1G61400' => 'aly', 'AL4G18580' => 'aly', 'AL5G12510' => 'aly', 'AL5G12540' => 'aly', 'AL6G43230' => 'aly', 'AL7G10370' => 'aly', 'AL7G19250' => 'aly', 'AL8G12240' => 'aly', 'AL8G18540' => 'aly', 'Aqoxy1G02409' => 'aox', 'Aqoxy2G03993' => 'aox', 'Aqoxy3G03357' => 'aox', 'Aqoxy4G00785' => 'aox', 'Aqoxy5G02598' => 'aox', 'Aqoxy6G00132' => 'aox', 'Aqoxy7G01776' => 'aox', 'Aqoxy7G02316' => 'aox', 'Aqoxy7G03973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.12AFKW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B8730' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27IQR1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3F75VG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3RE0GA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41TCQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.527VTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FIR39' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5W8UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DA38EV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ63HS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H1I32C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HC27T5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4M8AP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7N3CZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9UVDZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LS1NQA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT1D4B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SKC4TM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCFV76' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF9Q1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQWD9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1ZM88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WE07RT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YCK7VH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJE6Q6' => 'arhy', 'AT1G28240' => 'ath', 'AT1G34550' => 'ath', 'AT1G53040' => 'ath', 'AT2G02910' => 'ath', 'AT4G09630' => 'ath', 'AT4G38500' => 'ath', 'AT5G42660' => 'ath', 'AT5G46220' => 'ath', 'ATR0152G026' => 'atr', 'ATR0564G343' => 'atr', 'ATR0706G151' => 'atr', 'ATR0733G207' => 'atr', 'ATR0751G234' => 'atr', 'ATR0807G048' => 'atr', 'ATR1091G084' => 'atr', 'Atru.chr10.1229' => 'acertr', 'Atru.chr10.1230' => 'acertr', 'Atru.chr10.1874' => 'acertr', 'Atru.chr11.1808' => 'acertr', 'Atru.chr13.1795' => 'acertr', 'Atru.chr13.570' => 'acertr', 'Atru.chr2.2608' => 'acertr', 'Atru.chr2.2609' => 'acertr', 'Atru.chr5.3428' => 'acertr', 'Atru.chr8.1171' => 'acertr', 'AUR62004651' => 'cqu', 'AUR62008675' => 'cqu', 'AUR62010014' => 'cqu', 'AUR62013004' => 'cqu', 'AUR62014825' => 'cqu', 'AUR62015015' => 'cqu', 'AUR62015151' => 'cqu', 'AUR62017020' => 'cqu', 'AUR62019422' => 'cqu', 'AUR62023570' => 'cqu', 'AUR62025571' => 'cqu', 'AUR62029098' => 'cqu', 'AUR62033863' => 'cqu', 'AUR62034296' => 'cqu', 'AUR62040075' => 'cqu', 'BcaB02g07334' => 'bca', 'BcaB02g10575' => 'bca', 'BcaB03g12119' => 'bca', 'BcaB03g12120' => 'bca', 'BcaB03g13945' => 'bca', 'BcaB04g17123' => 'bca', 'BcaB04g17867' => 'bca', 'BcaB04g19839' => 'bca', 'BcaB07g30317' => 'bca', 'BcaB07g32432' => 'bca', 'BcaB07g33362' => 'bca', 'BcaB08g36611' => 'bca', 'BcaC01g00028' => 'bca', 'BcaC01g01356' => 'bca', 'BcaC01g02034' => 'bca', 'BcaC01g06051' => 'bca', 'BcaC03g16839' => 'bca', 'BcaC03g17176' => 'bca', 'BcaC05g26829' => 'bca', 'BcaC06g31490' => 'bca', 'BcaC06g35344' => 'bca', 'BcaC06g36570' => 'bca', 'BcaC07g37537' => 'bca', 'BcaC08g43491' => 'bca', 'BcaC08g43773' => 'bca', 'BcaNung00234' => 'bca', 'BcaNung01982' => 'bca', 'BcaNung03707' => 'bca', 'BcaNung06454' => 'bca', 'BolC2t10762H' => 'bol', 'BolC2t11191H' => 'bol', 'BolC3t14322H' => 'bol', 'BolC3t19747H' => 'bol', 'BolC3t21425H' => 'bol', 'BolC4t27800H' => 'bol', 'BolC5t31423H' => 'bol', 'BolC6t35951H' => 'bol', 'BolC6t36282H' => 'bol', 'BolC7t40678H' => 'bol', 'BolC7t40679H' => 'bol', 'BolC7t42222H' => 'bol', 'BolC7t43492H' => 'bol', 'BolC7t46785H' => 'bol', 'BolC8t47853H' => 'bol', 'BolC9t56805H' => 'bol', 'BraA02t08000Z' => 'bra', 'BraA02t08341Z' => 'bra', 'BraA03t10936Z' => 'bra', 'BraA03t15657Z' => 'bra', 'BraA04t18100Z' => 'bra', 'BraA05t20523Z' => 'bra', 'BraA06t23353Z' => 'bra', 'BraA06t27473Z' => 'bra', 'BraA06t27769Z' => 'bra', 'BraA07t28928Z' => 'bra', 'BraA08t32236Z' => 'bra', 'BraA08t32841Z' => 'bra', 'BraA08t34524Z' => 'bra', 'BraA09t38742Z' => 'bra', 'BraA09t39295Z' => 'bra', 'C02p47180' => 'bna', 'C02p50990' => 'bna', 'C03p19360' => 'bna', 'C03p74950' => 'bna', 'C03p91000' => 'bna', 'C04p63260' => 'bna', 'C05p27050' => 'bna', 'C06p08750' => 'bna', 'C06p11490' => 'bna', 'C07p02820' => 'bna', 'C07p17180' => 'bna', 'C07p29440' => 'bna', 'C07p63730' => 'bna', 'C09p39260' => 'bna', 'CAN.G1164.34' => 'can', 'CAN.G1164.39' => 'can', 'CAN.G1530.3' => 'can', 'CAN.G162.61' => 'can', 'CAN.G176.6' => 'can', 'CAN.G289.49' => 'can', 'CAN.G370.21' => 'can', 'CAN.G370.22' => 'can', 'CAN.G371.117' => 'can', 'CAN.G58.37' => 'can', 'CAN.G588.98' => 'can', 'CANSAT21G2266' => 'cansat', 'CANSAT25G2799' => 'cansat', 'CANSAT35G0862' => 'cansat', 'CANSAT35G1704' => 'cansat', 'CANSAT35G1760' => 'cansat', 'CANSAT56G3971' => 'cansat', 'CANSAT56G4116' => 'cansat', 'CANSAT80G1259' => 'cansat', 'CARHR027730' => 'chi', 'CARHR033880' => 'chi', 'CARHR043270' => 'chi', 'CARHR145330' => 'chi', 'CARHR145340' => 'chi', 'CARHR175570' => 'chi', 'CARHR181570' => 'chi', 'CARHR258470' => 'chi', 'CARHR260490' => 'chi', 'CARHR294220' => 'chi', 'Carub.0001s2668' => 'cru', 'Carub.0001s3257' => 'cru', 'Carub.0001s4220' => 'cru', 'Carub.0005s0179' => 'cru', 'Carub.0006s2807' => 'cru', 'Carub.0007s0039' => 'cru', 'Carub.0008s0169' => 'cru', 'Carub.0008s0636' => 'cru', 'Ca_00338_v3' => 'car', 'Ca_00542_v3' => 'car', 'Ca_01844_v3' => 'car', 'Ca_10611_v3' => 'car', 'Ca_13326_v3' => 'car', 'Ca_17944_v3' => 'car', 'Ca_18546_v3' => 'car', 'Ca_24219_v3' => 'car', 'Ca_29972_v3' => 'car', 'CBR_g3681' => 'cbr', 'CBR_g40021' => 'cbr', 'Cc01_g08140' => 'ccan', 'Cc02_g13410' => 'ccan', 'Cc02_g37480' => 'ccan', 'Cc05_g12030' => 'ccan', 'Cc09_g03370' => 'ccan', 'Cc09_g10300' => 'ccan', 'Cc10_g03530' => 'ccan', 'Cc10_g11380' => 'ccan', 'CDE01G0176' => 'cde', 'CDE02G0675' => 'cde', 'CDE02G0942' => 'cde', 'CDE02G1153' => 'cde', 'CDE02G4177' => 'cde', 'CDE04G2117' => 'cde', 'CDE04G2736' => 'cde', 'CDE08G1161' => 'cde', 'CDE09G1238' => 'cde', 'Cfa000467' => 'cfa', 'Cfa000947' => 'cfa', 'Cfa004969' => 'cfa', 'Cfa005284' => 'cfa', 'Cfa008993' => 'cfa', 'Cfa018187' => 'cfa', 'Cfa018454' => 'cfa', 'Cfa020585' => 'cfa', 'Ciclev10000424m.g' => 'ccl', 'Ciclev10003605m.g' => 'ccl', 'Ciclev10007828m.g' => 'ccl', 'Ciclev10014620m.g' => 'ccl', 'Ciclev10015169m.g' => 'ccl', 'Ciclev10018291m.g' => 'ccl', 'Ciclev10028256m.g' => 'ccl', 'Ciclev10033822m.g' => 'ccl', 'CiPaw.05G060300' => 'cil', 'CiPaw.05G085000' => 'cil', 'CiPaw.06G083700' => 'cil', 'CiPaw.06G120300' => 'cil', 'CiPaw.09G060500' => 'cil', 'CiPaw.09G123800' => 'cil', 'CiPaw.11G169700' => 'cil', 'CiPaw.12G118300' => 'cil', 'CiPaw.15G071000' => 'cil', 'CiPaw.15G081900' => 'cil', 'ClCG01G024610' => 'cla', 'ClCG03G006070' => 'cla', 'ClCG05G019250' => 'cla', 'ClCG09G009500' => 'cla', 'ClCG11G008200' => 'cla', 'ClCG11G018080' => 'cla', 'COL.COLO4_17373' => 'col', 'COL.COLO4_22994' => 'col', 'COL.COLO4_26389' => 'col', 'COL.COLO4_27170' => 'col', 'COL.COLO4_31074' => 'col', 'COL.COLO4_31465' => 'col', 'COL.COLO4_36438' => 'col', 'COL.COLO4_36439' => 'col', 'Cpa.g.c38781' => 'cpa', 'Cpa.g.sc128.12' => 'cpa', 'Cpa.g.sc166.7' => 'cpa', 'Cpa.g.sc166.8' => 'cpa', 'Cpa.g.sc20.111' => 'cpa', 'Cpa.g.sc27.31' => 'cpa', 'Cpa.g.sc64.36' => 'cpa', 'Cpa.g.sc64.37' => 'cpa', 'Cpa.g.sc66.49' => 'cpa', 'Cpa.g.sc80.64' => 'cpa', 'CsaV3_1G012320' => 'csa', 'CsaV3_2G008480' => 'csa', 'CsaV3_2G033450' => 'csa', 'CsaV3_3G044830' => 'csa', 'CsaV3_4G033710' => 'csa', 'CsaV3_6G051730' => 'csa', 'CsaV3_7G025350' => 'csa', 'CSS0001067' => 'camsi', 'CSS0005996' => 'camsi', 'CSS0006590' => 'camsi', 'CSS0009673' => 'camsi', 'CSS0010201' => 'camsi', 'CSS0010549' => 'camsi', 'CSS0011364' => 'camsi', 'CSS0014473' => 'camsi', 'CSS0014961' => 'camsi', 'CSS0020191' => 'camsi', 'CSS0021165' => 'camsi', 'CSS0022306' => 'camsi', 'CSS0030591' => 'camsi', 'CSS0030696' => 'camsi', 'CSS0032653' => 'camsi', 'CSS0037487' => 'camsi', 'CSS0041102' => 'camsi', 'CSS0041261' => 'camsi', 'CSS0046246' => 'camsi', 'CSS0049256' => 'camsi', 'DCAR_004075' => 'dca', 'DCAR_011538' => 'dca', 'DCAR_019553' => 'dca', 'DCAR_020952' => 'dca', 'DCAR_021739' => 'dca', 'DCAR_027407' => 'dca', 'DCAR_027913' => 'dca', 'DCAR_028066' => 'dca', 'Dinv05899' => 'din', 'Dinv07563' => 'din', 'Dinv08010' => 'din', 'Dinv14125' => 'din', 'Dinv20172' => 'din', 'Dinv30743' => 'din', 'Dinv31229' => 'din', 'Dinv34162' => 'din', 'Dinv36028' => 'din', 'Dinv39368' => 'din', 'Dinv40565' => 'din', 'Dinv41706' => 'din', 'Duzib052G0089' => 'dzi', 'Duzib116G0641' => 'dzi', 'Duzib132G0069' => 'dzi', 'Duzib132G1219' => 'dzi', 'Duzib147G0278' => 'dzi', 'Duzib160G0480' => 'dzi', 'Duzib170G0661' => 'dzi', 'Duzib177G0591' => 'dzi', 'Duzib187G1353' => 'dzi', 'Duzib192G0858' => 'dzi', 'Duzib192G0883' => 'dzi', 'Duzib213G0506' => 'dzi', 'Duzib235G0289' => 'dzi', 'Duzib251G0422' => 'dzi', 'ECA232G3898' => 'eca', 'ECA233G5950' => 'eca', 'ECA234G1699' => 'eca', 'ECA234G2421' => 'eca', 'ECA236G0426' => 'eca', 'ECA236G4331' => 'eca', 'ECA248G2573' => 'eca', 'EL10Ac1g00077' => 'bvu', 'EL10Ac1g01746' => 'bvu', 'EL10Ac2g03464' => 'bvu', 'EL10Ac4g08176' => 'bvu', 'EL10Ac7g17521' => 'bvu', 'EL10Ac8g20386' => 'bvu', 'EL10Ac9g21343' => 'bvu', 'EL10Ac9g22688' => 'bvu', 'Eucgr.B03434' => 'egr', 'Eucgr.D00618' => 'egr', 'Eucgr.E02395' => 'egr', 'Eucgr.F01129' => 'egr', 'Eucgr.F02622' => 'egr', 'Eucgr.F04207' => 'egr', 'FAN01G0570' => 'fan', 'FAN03G3351' => 'fan', 'FAN06G3702' => 'fan', 'FAN07G2149' => 'fan', 'FAN10G3758' => 'fan', 'FAN11G1170' => 'fan', 'FAN11G2050' => 'fan', 'FAN11G2724' => 'fan', 'FAN12G1700' => 'fan', 'FAN12G2028' => 'fan', 'FAN15G1160' => 'fan', 'FAN15G3063' => 'fan', 'FAN16G2540' => 'fan', 'FAN16G3077' => 'fan', 'FAN16G3624' => 'fan', 'FAN17G0221' => 'fan', 'FAN20G2492' => 'fan', 'FAN20G2905' => 'fan', 'FAN21G0548' => 'fan', 'FAN21G1300' => 'fan', 'FAN22G0077' => 'fan', 'FAN22G1315' => 'fan', 'FAN24G1280' => 'fan', 'FAN24G1445' => 'fan', 'FAN24G3527' => 'fan', 'FAN25G0464' => 'fan', 'FAN25G2885' => 'fan', 'FAN25G3270' => 'fan', 'FAN27G1101' => 'fan', 'FAN27G2846' => 'fan', 'FAN27G3524' => 'fan', 'FvH4_2g11770' => 'fve', 'FvH4_2g15630' => 'fve', 'FvH4_3g05570' => 'fve', 'FvH4_3g09110' => 'fve', 'FvH4_3g19940' => 'fve', 'FvH4_4g04821' => 'fve', 'FvH4_4g31480' => 'fve', 'FvH4_7g01740' => 'fve', 'Glyma.05G130400' => 'gma', 'Glyma.05G156400' => 'gma', 'Glyma.07G197000' => 'gma', 'Glyma.08G085151' => 'gma', 'Glyma.08G114500' => 'gma', 'Glyma.08G300400' => 'gma', 'Glyma.10G215800' => 'gma', 'Glyma.12G224400' => 'gma', 'Glyma.13G179300' => 'gma', 'Glyma.13G218151' => 'gma', 'Glyma.13G238800' => 'gma', 'Glyma.13G276900' => 'gma', 'Glyma.14G078200' => 'gma', 'Glyma.15G074500' => 'gma', 'Glyma.15G094100' => 'gma', 'Glyma.17G247200' => 'gma', 'Glyma.18G120100' => 'gma', 'Glyma.20G176000' => 'gma', 'Gohir.A01G063600' => 'ghi', 'Gohir.A01G170301' => 'ghi', 'Gohir.A02G060500' => 'ghi', 'Gohir.A05G133850' => 'ghi', 'Gohir.A05G161400' => 'ghi', 'Gohir.A06G012900' => 'ghi', 'Gohir.A06G035901' => 'ghi', 'Gohir.A06G127100' => 'ghi', 'Gohir.A06G210500' => 'ghi', 'Gohir.A08G008650' => 'ghi', 'Gohir.A09G072700' => 'ghi', 'Gohir.A09G088301' => 'ghi', 'Gohir.A10G040600' => 'ghi', 'Gohir.A12G036300' => 'ghi', 'Gohir.A12G143350' => 'ghi', 'Gohir.A12G165500' => 'ghi', 'Gohir.A13G145700' => 'ghi', 'Gohir.D01G050000' => 'ghi', 'Gohir.D01G051366' => 'ghi', 'Gohir.D01G161350' => 'ghi', 'Gohir.D02G065900' => 'ghi', 'Gohir.D05G164200' => 'ghi', 'Gohir.D05G355500' => 'ghi', 'Gohir.D06G010400' => 'ghi', 'Gohir.D06G111250' => 'ghi', 'Gohir.D06G132000' => 'ghi', 'Gohir.D06G210500' => 'ghi', 'Gohir.D07G165675' => 'ghi', 'Gohir.D08G062240' => 'ghi', 'Gohir.D08G086101' => 'ghi', 'Gohir.D08G138060' => 'ghi', 'Gohir.D09G072300' => 'ghi', 'Gohir.D10G041400' => 'ghi', 'Gohir.D11G191020' => 'ghi', 'Gohir.D11G212066' => 'ghi', 'Gohir.D12G036300' => 'ghi', 'Gohir.D12G168600' => 'ghi', 'Gohir.D13G150600' => 'ghi', 'Gorai.001G057300' => 'gra', 'Gorai.002G069900' => 'gra', 'Gorai.002G200000' => 'gra', 'Gorai.003G067600' => 'gra', 'Gorai.005G074800' => 'gra', 'Gorai.006G087300' => 'gra', 'Gorai.008G037500' => 'gra', 'Gorai.008G181400' => 'gra', 'Gorai.009G169400' => 'gra', 'Gorai.009G387900' => 'gra', 'Gorai.010G013300' => 'gra', 'Gorai.010G153800' => 'gra', 'Gorai.010G255800' => 'gra', 'Gorai.011G043700' => 'gra', 'Gorai.011G198900' => 'gra', 'Gorai.013G168400' => 'gra', 'GSVIVG01005212001' => 'vvi', 'GSVIVG01006163001' => 'vvi', 'GSVIVG01009625001' => 'vvi', 'GSVIVG01014338001' => 'vvi', 'GSVIVG01020005001' => 'vvi', 'GSVIVG01021450001' => 'vvi', 'GSVIVG01023975001' => 'vvi', 'GSVIVG01034490001' => 'vvi', 'HanXRQChr04g0112071' => 'han', 'HanXRQChr05g0131151' => 'han', 'HanXRQChr09g0262371' => 'han', 'HanXRQChr09g0268401' => 'han', 'HanXRQChr10g0279241' => 'han', 'HanXRQChr10g0297961' => 'han', 'HanXRQChr11g0326231' => 'han', 'HanXRQChr11g0328471' => 'han', 'HanXRQChr16g0507941' => 'han', 'HanXRQChr17g0560211' => 'han', 'Haze_02108' => 'cav', 'Haze_02428' => 'cav', 'Haze_05593' => 'cav', 'Haze_06448' => 'cav', 'Haze_09427' => 'cav', 'Haze_12022' => 'cav', 'Haze_17612' => 'cav', 'Haze_17928' => 'cav', 'Hma1.2p1_0032F.1_g019250' => 'hma', 'Hma1.2p1_0163F.1_g072690' => 'hma', 'Hma1.2p1_0265F.1_g106710' => 'hma', 'Hma1.2p1_0286F.1_g113970' => 'hma', 'Hma1.2p1_0363F.1_g136640' => 'hma', 'Hma1.2p1_0584F.1_g183470' => 'hma', 'Hma1.2p1_0885F.1_g232570' => 'hma', 'HPP92_006022' => 'vpl', 'HPP92_007320' => 'vpl', 'HPP92_011521' => 'vpl', 'HPP92_019387' => 'vpl', 'HPP92_024038' => 'vpl', 'Hund05891' => 'sun', 'Hund06450' => 'sun', 'Hund12053' => 'sun', 'Hund16800' => 'sun', 'Hund21222' => 'sun', 'Hund22896' => 'sun', 'Hund23746' => 'sun', 'Hund27083' => 'sun', 'Lalb_Chr02g0141831' => 'lal', 'Lalb_Chr02g0141841' => 'lal', 'Lalb_Chr05g0220411' => 'lal', 'Lalb_Chr06g0162081' => 'lal', 'Lalb_Chr09g0327651' => 'lal', 'Lalb_Chr13g0295051' => 'lal', 'Lalb_Chr15g0086801' => 'lal', 'Lalb_Chr16g0383781' => 'lal', 'Lalb_Chr16g0383791' => 'lal', 'Lalb_Chr18g0055441' => 'lal', 'Lalb_Chr18g0059611' => 'lal', 'Lalb_Chr20g0109661' => 'lal', 'Lalb_Chr20g0109831' => 'lal', 'Lalb_Chr20g0121871' => 'lal', 'Lalb_Chr22g0355361' => 'lal', 'Lalb_Chr25g0286371' => 'lal', 'Lj1A1187G43' => 'lonja', 'Lj1A1205T50' => 'lonja', 'Lj1A800G33' => 'lonja', 'Lj1C1187T7' => 'lonja', 'Lj1C843T11' => 'lonja', 'Lj1g0010940' => 'lja', 'Lj2A288T69' => 'lonja', 'Lj3g0024276' => 'lja', 'Lj4A47T76' => 'lonja', 'Lj4g0005805' => 'lja', 'Lj4g0006097' => 'lja', 'Lj4g0008528' => 'lja', 'Lj4g0024907' => 'lja', 'Lj5g0012472' => 'lja', 'Lj5g0018648' => 'lja', 'Lj6C789G1' => 'lonja', 'Lj6g0004000' => 'lja', 'Lj7A292G67' => 'lonja', 'Lj7A292T64' => 'lonja', 'Lj9A400T58' => 'lonja', 'Lsat_1_v5_gn_1_126181' => 'lsa', 'Lsat_1_v5_gn_4_123041' => 'lsa', 'Lsat_1_v5_gn_4_133620' => 'lsa', 'Lsat_1_v5_gn_4_53221' => 'lsa', 'Lsat_1_v5_gn_4_71961' => 'lsa', 'Lsat_1_v5_gn_7_105241' => 'lsa', 'Lsat_1_v5_gn_7_21361' => 'lsa', 'Lsat_1_v5_gn_7_28860' => 'lsa', 'Lsat_1_v5_gn_7_31260' => 'lsa', 'Lsat_1_v5_gn_8_52801' => 'lsa', 'Manes.02G191400' => 'mes', 'Manes.03G110100' => 'mes', 'Manes.04G071100' => 'mes', 'Manes.05G100500' => 'mes', 'Manes.05G164700' => 'mes', 'Manes.15G087000' => 'mes', 'Manes.15G121500' => 'mes', 'Manes.16G028300' => 'mes', 'Manes.17G046100' => 'mes', 'Manes.17G069800' => 'mes', 'Manes.18G100500' => 'mes', 'Mapoly0002s0109' => 'mpo', 'Mapoly0024s0007' => 'mpo', 'Mapoly0089s0032' => 'mpo', 'MBI04_g42241_MAGBIO' => 'mbi', 'MBI05_g11988_MAGBIO' => 'mbi', 'MBI05_g35452_MAGBIO' => 'mbi', 'MBI07_g30179_MAGBIO' => 'mbi', 'MBI07_g35859_MAGBIO' => 'mbi', 'MBI07_g35860_MAGBIO' => 'mbi', 'MBI07_g37166_MAGBIO' => 'mbi', 'MBI08_g18172_MAGBIO' => 'mbi', 'MBI09_g08441_MAGBIO' => 'mbi', 'MBI13_g01676_MAGBIO' => 'mbi', 'MBI14_g42955_MAGBIO' => 'mbi', 'MBI16_g13161_MAGBIO' => 'mbi', 'MBI17_g27204_MAGBIO' => 'mbi', 'MBI19_g21595_MAGBIO' => 'mbi', 'MD00G1148400' => 'mdo', 'MD02G1301200' => 'mdo', 'MD03G1227800' => 'mdo', 'MD05G1041100' => 'mdo', 'MD05G1124800' => 'mdo', 'MD05G1284000' => 'mdo', 'MD05G1338800' => 'mdo', 'MD05G1338900' => 'mdo', 'MD07G1022800' => 'mdo', 'MD10G1047500' => 'mdo', 'MD10G1127500' => 'mdo', 'MD10G1262300' => 'mdo', 'MD10G1293800' => 'mdo', 'MD16G1074300' => 'mdo', 'Medtr1g021670' => 'mtr', 'Medtr1g096320' => 'mtr', 'Medtr2g013690' => 'mtr', 'Medtr2g019450' => 'mtr', 'Medtr2g085170' => 'mtr', 'Medtr4g088785' => 'mtr', 'Medtr8g055930' => 'mtr', 'Medtr8g085850' => 'mtr', 'MELO3C002605.2' => 'cme', 'MELO3C003891.2' => 'cme', 'MELO3C004012.2' => 'cme', 'MELO3C007134.2' => 'cme', 'MELO3C008118.2' => 'cme', 'MELO3C016700.2' => 'cme', 'MELO3C024127.2' => 'cme', 'MELO3C033361.2' => 'cme', 'MELO3C033362.2' => 'cme', 'Migut.C00430' => 'egut', 'Migut.C01246' => 'egut', 'Migut.E00101' => 'egut', 'Migut.H01486' => 'egut', 'Migut.H01939' => 'egut', 'Migut.K00360' => 'egut', 'Migut.M00910' => 'egut', 'Migut.M01139' => 'egut', 'Migut.N02677' => 'egut', 'MSTRG.13252' => 'ama', 'MSTRG.14701' => 'ama', 'MSTRG.1521' => 'ama', 'MSTRG.15884' => 'ama', 'MSTRG.16242' => 'ama', 'MSTRG.22285' => 'ama', 'MSTRG.22444' => 'ama', 'MSTRG.2349' => 'ama', 'MSTRG.26308' => 'ama', 'MSTRG.28296' => 'ama', 'MSTRG.9895' => 'ama', 'Nitab4.5_0000110g0060' => 'nta', 'Nitab4.5_0000420g0130' => 'nta', 'Nitab4.5_0000422g0030' => 'nta', 'Nitab4.5_0000560g0180' => 'nta', 'Nitab4.5_0000703g0100' => 'nta', 'Nitab4.5_0000786g0200' => 'nta', 'Nitab4.5_0001336g0020' => 'nta', 'Nitab4.5_0001796g0030' => 'nta', 'Nitab4.5_0003348g0060' => 'nta', 'Nitab4.5_0003698g0040' => 'nta', 'Nitab4.5_0003942g0090' => 'nta', 'Nitab4.5_0004775g0070' => 'nta', 'Nitab4.5_0004864g0030' => 'nta', 'Nitab4.5_0005615g0020' => 'nta', 'Nitab4.5_0009288g0030' => 'nta', 'Nitab4.5_0009341g0010' => 'nta', 'Nitab4.5_0009535g0010' => 'nta', 'Nn1g03995' => 'nnu', 'Nn1g04100' => 'nnu', 'Nn1g06530' => 'nnu', 'Nn3g16404' => 'nnu', 'Nn3g17212' => 'nnu', 'Nn3g20776' => 'nnu', 'Nn3g21923' => 'nnu', 'Nn5g27737' => 'nnu', 'Nn5g29461' => 'nnu', 'Nn7g38355' => 'nnu', 'Nn8g39873' => 'nnu', 'Oeu000548.2' => 'oeu', 'Oeu004672.1' => 'oeu', 'Oeu015605.2' => 'oeu', 'Oeu016092.1' => 'oeu', 'Oeu017879.3' => 'oeu', 'Oeu024910.1' => 'oeu', 'Oeu028965.1' => 'oeu', 'Oeu031269.1' => 'oeu', 'Oeu031270.1' => 'oeu', 'Oeu032535.1' => 'oeu', 'Oeu034151.1' => 'oeu', 'Oeu034152.1' => 'oeu', 'Oeu034588.2' => 'oeu', 'Oeu050846.1' => 'oeu', 'Oeu050849.2' => 'oeu', 'Oeu051063.2' => 'oeu', 'Oeu052368.1' => 'oeu', 'Oeu052370.1' => 'oeu', 'Os01g0210400' => 'osa', 'Os01g0304300' => 'osa', 'Os01g0749100' => 'osa', 'Os02g0745800' => 'osa', 'Os03g0769050' => 'osa', 'Os05g0531500' => 'osa', 'Os06g0724300' => 'osa', 'Os11g0198100' => 'osa', 'Peaxi162Scf00069g01425' => 'pax', 'Peaxi162Scf00280g00811' => 'pax', 'Peaxi162Scf00310g00615' => 'pax', 'Peaxi162Scf00362g00542' => 'pax', 'Peaxi162Scf00461g00310' => 'pax', 'Peaxi162Scf00530g00118' => 'pax', 'Peaxi162Scf00541g00057' => 'pax', 'Peaxi162Scf00661g00017' => 'pax', 'Peaxi162Scf00926g00027' => 'pax', 'Peaxi162Scf01064g00263' => 'pax', 'Peaxi162Scf01211g00135' => 'pax', 'PGR004G2336' => 'pgr', 'PGR042G0327' => 'pgr', 'PGR042G1957' => 'pgr', 'PGR042G2003' => 'pgr', 'PGR042G3929' => 'pgr', 'PGR083G1137' => 'pgr', 'PGR083G1364' => 'pgr', 'PGSC0003DMG400003381' => 'stu', 'PGSC0003DMG400003417' => 'stu', 'PGSC0003DMG400008981' => 'stu', 'PGSC0003DMG400012417' => 'stu', 'PGSC0003DMG400012823' => 'stu', 'PGSC0003DMG400016885' => 'stu', 'PGSC0003DMG400022812' => 'stu', 'PGSC0003DMG400029726' => 'stu', 'PGSC0003DMG401009243' => 'stu', 'PGSC0003DMG401031505' => 'stu', 'PGSC0003DMG402031505' => 'stu', 'Phvul.001G017600' => 'pvu', 'Phvul.002G193500' => 'pvu', 'Phvul.002G228900' => 'pvu', 'Phvul.002G236800' => 'pvu', 'Phvul.003G049500' => 'pvu', 'Phvul.005G072000' => 'pvu', 'Phvul.006G164800' => 'pvu', 'Phvul.006G185100' => 'pvu', 'Phvul.007G090000' => 'pvu', 'Potri.001G399800' => 'ptr', 'Potri.002G149900' => 'ptr', 'Potri.004G044100' => 'ptr', 'Potri.004G177600' => 'ptr', 'Potri.009G138000' => 'ptr', 'Potri.010G094000' => 'ptr', 'Potri.011G053000' => 'ptr', 'Potri.011G119300' => 'ptr', 'Potri.013G113700' => 'ptr', 'Potri.018G107800' => 'ptr', 'Potri.019G084100' => 'ptr', 'Pp3c14_23720' => 'ppa', 'Pp3c16_6340' => 'ppa', 'Pp3c23_13420' => 'ppa', 'Pp3c24_2740' => 'ppa', 'Pp3c25_860' => 'ppa', 'Pp3c8_21750' => 'ppa', 'Prupe.1G273000' => 'ppe', 'Prupe.1G273700' => 'ppe', 'Prupe.1G274100' => 'ppe', 'Prupe.2G023300' => 'ppe', 'Prupe.4G048000' => 'ppe', 'Prupe.4G080400' => 'ppe', 'Prupe.4G181200' => 'ppe', 'Prupe.8G056900' => 'ppe', 'Prupe.8G168700' => 'ppe', 'Psat1g189080' => 'psa', 'Psat1g204760' => 'psa', 'Psat4g175560' => 'psa', 'Psat4g177720' => 'psa', 'Psat5g244240' => 'psa', 'Psat6g010720' => 'psa', 'Psat6g187200' => 'psa', 'Psat7g072040' => 'psa', 'PSO017G3501' => 'pso', 'PSO063G2148' => 'pso', 'PSO063G5608' => 'pso', 'PSO210G6392' => 'pso', 'PSO541G2319' => 'pso', 'PSO541G2836' => 'pso', 'PSO541G4012' => 'pso', 'PSO541G6253' => 'pso', 'PSO675G0580' => 'pso', 'PSO675G0856' => 'pso', 'PSO675G5635' => 'pso', 'PSO675G9157' => 'pso', 'PSO832G1660' => 'pso', 'PSO832G1969' => 'pso', 'QL02p007186' => 'qlo', 'QL02p033904' => 'qlo', 'QL03p064391' => 'qlo', 'QL05p040593' => 'qlo', 'QL05p058242' => 'qlo', 'QL08p021825' => 'qlo', 'QL11p004981' => 'qlo', 'RcHm_v2.0_Chr1g0318301' => 'rch', 'RcHm_v2.0_Chr4g0418501' => 'rch', 'RcHm_v2.0_Chr4g0439971' => 'rch', 'RcHm_v2.0_Chr5g0008541' => 'rch', 'RcHm_v2.0_Chr5g0014101' => 'rch', 'RcHm_v2.0_Chr5g0014131' => 'rch', 'RcHm_v2.0_Chr5g0033621' => 'rch', 'RcHm_v2.0_Chr6g0272041' => 'rch', 'RcHm_v2.0_Chr6g0278831' => 'rch', 'Rhsim02G0130400' => 'rsi', 'Rhsim02G0171100' => 'rsi', 'Rhsim05G0053000' => 'rsi', 'Rhsim05G0053100' => 'rsi', 'Rhsim06G0096500' => 'rsi', 'Rhsim06G0096600' => 'rsi', 'Rhsim06G0199100' => 'rsi', 'Rhsim12G0062300' => 'rsi', 'Rhsim12G0062800' => 'rsi', 'Sabra02G0118600' => 'sbr', 'Sabra04G0027300' => 'sbr', 'Sabra04G0119500' => 'sbr', 'Sabra08G0112500' => 'sbr', 'Sabra11G0036800' => 'sbr', 'Sabra11G0103800' => 'sbr', 'Sabra13G0096300' => 'sbr', 'Sabra16G0262300' => 'sbr', 'Sabra18G0091700' => 'sbr', 'Sabra19G0095400' => 'sbr', 'SalBow6G3080' => 'sbo', 'SalBow7G1157' => 'sbo', 'SalBow7G2123' => 'sbo', 'SalBow7G2285' => 'sbo', 'SalBow7G3537' => 'sbo', 'SalBow8G2947' => 'sbo', 'SalBow8G4463' => 'sbo', 'SalBow8G5466' => 'sbo', 'Sc01g0001750' => 'sci', 'Sc02g0006640' => 'sci', 'Sc02g0006670' => 'sci', 'Sc04g0008220' => 'sci', 'Sc05g0006190' => 'sci', 'Sc08g0002760' => 'sci', 'Sc17g0006170' => 'sci', 'Sc22g0002050' => 'sci', 'Sc23g0001190' => 'sci', 'Sc24g0000980' => 'sci', 'Sed0006245' => 'sed', 'Sed0007543' => 'sed', 'Sed0009411' => 'sed', 'Sed0010765' => 'sed', 'Sed0012944' => 'sed', 'Sed0014682' => 'sed', 'Sed0016174' => 'sed', 'Sed0016796' => 'sed', 'Sed0020317' => 'sed', 'Sed0021467' => 'sed', 'SEGI_01316' => 'sgi', 'SEGI_03374' => 'sgi', 'SEGI_16265' => 'sgi', 'SEGI_18569' => 'sgi', 'SEGI_20351' => 'sgi', 'SEGI_26395' => 'sgi', 'SEGI_29469' => 'sgi', 'SEGI_34771' => 'sgi', 'SEGI_36769' => 'sgi', 'SEGI_37139' => 'sgi', 'SGA_v2.0_scaffold100G29687' => 'sas', 'SGA_v2.0_scaffold118G32472' => 'sas', 'SGA_v2.0_scaffold14G07051' => 'sas', 'SGA_v2.0_scaffold183G39845' => 'sas', 'SGA_v2.0_scaffold1G00174' => 'sas', 'SGA_v2.0_scaffold22G09714' => 'sas', 'SGA_v2.0_scaffold333G48992' => 'sas', 'SGA_v2.0_scaffold46G17491' => 'sas', 'SGA_v2.0_scaffold49G18294' => 'sas', 'SGA_v2.0_scaffold63G21658' => 'sas', 'SHI01741' => 'shi', 'SHI05771' => 'shi', 'SHI18077' => 'shi', 'SHI20525' => 'shi', 'SHI20527' => 'shi', 'SHI20528' => 'shi', 'SMO172G0185' => 'smo', 'SMO198G0020' => 'smo', 'SMO351G0006' => 'smo', 'SMO356G0118' => 'smo', 'SMO358G0296' => 'smo', 'SMO367G0079' => 'smo', 'SMO367G1277' => 'smo', 'Solyc01g014220.3' => 'sly', 'Solyc01g111770.2' => 'sly', 'Solyc02g078180.3' => 'sly', 'Solyc03g006430.3' => 'sly', 'Solyc03g006456.1' => 'sly', 'Solyc03g079860.2' => 'sly', 'Solyc04g079770.3' => 'sly', 'Solyc05g007430.4' => 'sly', 'Solyc07g063150.3' => 'sly', 'Solyc08g016620.3' => 'sly', 'Solyc09g057590.3' => 'sly', 'Solyc09g057600.1' => 'sly', 'Solyc10g009050.3' => 'sly', 'Solyc11g017420.2' => 'sly', 'Sopen01g053810' => 'spe', 'Sopen02g023040' => 'spe', 'Sopen03g002440' => 'spe', 'Sopen04g033350' => 'spe', 'Sopen05g003310' => 'spe', 'Sopen07g004050' => 'spe', 'Sopen07g031340' => 'spe', 'Sopen08g006990' => 'spe', 'Sopen10g004830' => 'spe', 'Sopen11g009370' => 'spe', 'Sp1g24450' => 'spa', 'Sp1g29670' => 'spa', 'Sp1g39600' => 'spa', 'Sp2g11080' => 'spa', 'Sp2g13970' => 'spa', 'Sp4g16130' => 'spa', 'Sp6g13080' => 'spa', 'Sp7g37270' => 'spa', 'TAR371G0065' => 'tar', 'TAR376G0340' => 'tar', 'TAR376G0435' => 'tar', 'TAR381G0002' => 'tar', 'TAR381G1236' => 'tar', 'TAR624G0055' => 'tar', 'TAR624G0324' => 'tar', 'TAR624G0696' => 'tar', 'TAR624G0906' => 'tar', 'TAR625G0107' => 'tar', 'TAR626G0015' => 'tar', 'TAR626G1356' => 'tar', 'TAR627G0888' => 'tar', 'TAR628G0399' => 'tar', 'TAR628G1327' => 'tar', 'TAR629G2831' => 'tar', 'TAR629G2874' => 'tar', 'TAR633G1432' => 'tar', 'TAR633G2771' => 'tar', 'THA.LOC104803394' => 'tha', 'THA.LOC104805153' => 'tha', 'THA.LOC104806784' => 'tha', 'THA.LOC104810473' => 'tha', 'THA.LOC104813100' => 'tha', 'THA.LOC104814215' => 'tha', 'THA.LOC104815554' => 'tha', 'THA.LOC104820544' => 'tha', 'THA.LOC104824754' => 'tha', 'THA.LOC104827717' => 'tha', 'Thecc.02G031400' => 'tca', 'Thecc.02G055900' => 'tca', 'Thecc.02G350800' => 'tca', 'Thecc.06G150900' => 'tca', 'Thecc.06G186600' => 'tca', 'Thecc.07G089600' => 'tca', 'Thecc.08G020400' => 'tca', 'Thecc.08G182100' => 'tca', 'Thhalv10000873m.g' => 'esa', 'Thhalv10004185m.g' => 'esa', 'Thhalv10006981m.g' => 'esa', 'Thhalv10007204m.g' => 'esa', 'Thhalv10011374m.g' => 'esa', 'Thhalv10013482m.g' => 'esa', 'Thhalv10017801m.g' => 'esa', 'Thhalv10024983m.g' => 'esa', 'TPR.G12072' => 'tpr', 'TPR.G15769' => 'tpr', 'TPR.G16504' => 'tpr', 'TPR.G16506' => 'tpr', 'TPR.G24345' => 'tpr', 'TPR.G26666' => 'tpr', 'TPR.G27320' => 'tpr', 'TPR.G31819' => 'tpr', 'TPR.G38879' => 'tpr', 'TPR.G39015' => 'tpr', 'TPR.G8819' => 'tpr', 'TWI09G0924' => 'twi', 'TWI12G0811' => 'twi', 'TWI12G1294' => 'twi', 'TWI31G0150' => 'twi', 'TWI36G1262' => 'twi', 'TWI38G1287' => 'twi', 'TWI38G1633' => 'twi', 'TWI38G1982' => 'twi', 'TWI39G0116' => 'twi', 'TWI60G1011' => 'twi', 'TWI63G0171' => 'twi', 'TWI73G0839' => 'twi', 'TWI79G1511' => 'twi', 'unitig_0.g915' => 'ugi', 'unitig_0.g916' => 'ugi', 'unitig_21.g20219' => 'ugi', 'unitig_21.g20416' => 'ugi', 'unitig_578.g16132' => 'ugi', 'unitig_578.g16718' => 'ugi', 'unitig_62.g23481' => 'ugi', 'unitig_744.g24535' => 'ugi', 'unitig_749.g13525' => 'ugi', 'vmacro01248' => 'vma', 'vmacro02290' => 'vma', 'vmacro10946' => 'vma', 'vmacro11865' => 'vma', 'vmacro12493' => 'vma', 'vmacro17322' => 'vma', 'vmacro21599' => 'vma', 'vmacro23041' => 'vma', 'VMungo0251G0004' => 'vmu', 'VMungo0251G2639' => 'vmu', 'VMungo0251G2967' => 'vmu', 'VMungo0540G0864' => 'vmu', 'VMungo0540G1569' => 'vmu', 'VMungo0647G0317' => 'vmu', 'VMungo0720G1373' => 'vmu', 'VMungo0720G1508' => 'vmu', 'VMungo1080G0485' => 'vmu', 'VMungo1215G3177' => 'vmu', 'Zm00001eb112600' => 'zma', 'Zm00001eb120220' => 'zma', 'Zm00001eb153240' => 'zma', 'Zm00001eb168880' => 'zma', 'Zm00001eb213920' => 'zma', 'Zm00001eb228280' => 'zma', 'Zm00001eb254580' => 'zma', 'Zm00001eb272180' => 'zma', 'Zm00001eb293190' => 'zma', 'Zm00001eb322930' => 'zma', 'Zm00001eb353360' => 'zma', 'Zm00001eb353390' => 'zma', 'Zm00001eb353430' => 'zma', 'Zm00001eb353440' => 'zma', 'Zm00001eb353780' => 'zma' ), 'gf_id' => 'HOM05D000499', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000499' ), 'data_identifier' => 'HOM05D000499', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000499', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1066', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p29780' => 'bna', 'A02p33180' => 'bna', 'A03p16470' => 'bna', 'A03p66010' => 'bna', 'A04p25970' => 'bna', 'A06p01270' => 'bna', 'A06p46080' => 'bna', 'A07p11400' => 'bna', 'A08p01840' => 'bna', 'A08p08230' => 'bna', 'A08p25740' => 'bna', 'A09p32070' => 'bna', 'A09p37830' => 'bna', 'A09p42840' => 'bna', 'A09p42850' => 'bna', 'Aa31LG10G2060' => 'aar', 'Aa31LG2G7410' => 'aar', 'Aa31LG6G10200' => 'aar', 'Aa31LG6G16680' => 'aar', 'Aa31LG6G8470' => 'aar', 'Aa31LG9G12730' => 'aar', 'Aa31LG9G13680' => 'aar', 'Aa31LG9G14920' => 'aar', 'Aa31LG9G6650' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4977' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5467' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3254' => 'aag', 'Actinidia02578' => 'ach', 'Actinidia07693' => 'ach', 'Actinidia08413' => 'ach', 'Actinidia08414' => 'ach', 'Actinidia15289' => 'ach', 'Actinidia19871' => 'ach', 'Actinidia21475' => 'ach', 'Actinidia22576' => 'ach', 'Actinidia28327' => 'ach', 'Actinidia32491' => 'ach', 'Actinidia39463' => 'ach', 'Actinidia39571' => 'ach', 'Ah.01g013750' => 'amhyb', 'Ah.01g023210' => 'amhyb', 'Ah.04g164850' => 'amhyb', 'Ah.05g178060' => 'amhyb', 'Ah.07g204270' => 'amhyb', 'Ah.07g208480' => 'amhyb', 'Ah.09g237410' => 'amhyb', 'Ah.14g089460' => 'amhyb', 'AL1G41790' => 'aly', 'AL1G49050' => 'aly', 'AL1G53810' => 'aly', 'AL1G61400' => 'aly', 'AL4G18580' => 'aly', 'AL5G12510' => 'aly', 'AL5G12540' => 'aly', 'AL6G43230' => 'aly', 'AL7G10370' => 'aly', 'AL7G19250' => 'aly', 'AL8G12240' => 'aly', 'AL8G18540' => 'aly', 'Aqoxy1G02409' => 'aox', 'Aqoxy2G03993' => 'aox', 'Aqoxy3G03357' => 'aox', 'Aqoxy4G00785' => 'aox', 'Aqoxy5G02598' => 'aox', 'Aqoxy6G00132' => 'aox', 'Aqoxy7G01776' => 'aox', 'Aqoxy7G02316' => 'aox', 'Aqoxy7G03973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.12AFKW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B8730' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27IQR1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3F75VG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3RE0GA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41TCQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.527VTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FIR39' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5W8UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DA38EV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ63HS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H1I32C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HC27T5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4M8AP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7N3CZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9UVDZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LS1NQA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT1D4B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SKC4TM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCFV76' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF9Q1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQWD9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1ZM88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WE07RT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YCK7VH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJE6Q6' => 'arhy', 'AT1G28240' => 'ath', 'AT1G34550' => 'ath', 'AT1G53040' => 'ath', 'AT2G02910' => 'ath', 'AT4G09630' => 'ath', 'AT4G38500' => 'ath', 'AT5G42660' => 'ath', 'AT5G46220' => 'ath', 'ATR0152G026' => 'atr', 'ATR0564G343' => 'atr', 'ATR0706G151' => 'atr', 'ATR0733G207' => 'atr', 'ATR0751G234' => 'atr', 'ATR0807G048' => 'atr', 'ATR1091G084' => 'atr', 'Atru.chr10.1229' => 'acertr', 'Atru.chr10.1230' => 'acertr', 'Atru.chr10.1874' => 'acertr', 'Atru.chr11.1808' => 'acertr', 'Atru.chr13.1795' => 'acertr', 'Atru.chr13.570' => 'acertr', 'Atru.chr2.2608' => 'acertr', 'Atru.chr2.2609' => 'acertr', 'Atru.chr5.3428' => 'acertr', 'Atru.chr8.1171' => 'acertr', 'AUR62004651' => 'cqu', 'AUR62008675' => 'cqu', 'AUR62010014' => 'cqu', 'AUR62013004' => 'cqu', 'AUR62014825' => 'cqu', 'AUR62015015' => 'cqu', 'AUR62015151' => 'cqu', 'AUR62017020' => 'cqu', 'AUR62019422' => 'cqu', 'AUR62023570' => 'cqu', 'AUR62025571' => 'cqu', 'AUR62029098' => 'cqu', 'AUR62033863' => 'cqu', 'AUR62034296' => 'cqu', 'AUR62040075' => 'cqu', 'BcaB02g07334' => 'bca', 'BcaB02g10575' => 'bca', 'BcaB03g12119' => 'bca', 'BcaB03g12120' => 'bca', 'BcaB03g13945' => 'bca', 'BcaB04g17123' => 'bca', 'BcaB04g17867' => 'bca', 'BcaB04g19839' => 'bca', 'BcaB07g30317' => 'bca', 'BcaB07g32432' => 'bca', 'BcaB07g33362' => 'bca', 'BcaB08g36611' => 'bca', 'BcaC01g00028' => 'bca', 'BcaC01g01356' => 'bca', 'BcaC01g02034' => 'bca', 'BcaC01g06051' => 'bca', 'BcaC03g16839' => 'bca', 'BcaC03g17176' => 'bca', 'BcaC05g26829' => 'bca', 'BcaC06g31490' => 'bca', 'BcaC06g35344' => 'bca', 'BcaC06g36570' => 'bca', 'BcaC07g37537' => 'bca', 'BcaC08g43491' => 'bca', 'BcaC08g43773' => 'bca', 'BcaNung00234' => 'bca', 'BcaNung01982' => 'bca', 'BcaNung03707' => 'bca', 'BcaNung06454' => 'bca', 'BolC2t10762H' => 'bol', 'BolC2t11191H' => 'bol', 'BolC3t14322H' => 'bol', 'BolC3t19747H' => 'bol', 'BolC3t21425H' => 'bol', 'BolC4t27800H' => 'bol', 'BolC5t31423H' => 'bol', 'BolC6t35951H' => 'bol', 'BolC6t36282H' => 'bol', 'BolC7t40678H' => 'bol', 'BolC7t40679H' => 'bol', 'BolC7t42222H' => 'bol', 'BolC7t43492H' => 'bol', 'BolC7t46785H' => 'bol', 'BolC8t47853H' => 'bol', 'BolC9t56805H' => 'bol', 'BraA02t08000Z' => 'bra', 'BraA02t08341Z' => 'bra', 'BraA03t10936Z' => 'bra', 'BraA03t15657Z' => 'bra', 'BraA04t18100Z' => 'bra', 'BraA05t20523Z' => 'bra', 'BraA06t23353Z' => 'bra', 'BraA06t27473Z' => 'bra', 'BraA06t27769Z' => 'bra', 'BraA07t28928Z' => 'bra', 'BraA08t32236Z' => 'bra', 'BraA08t32841Z' => 'bra', 'BraA08t34524Z' => 'bra', 'BraA09t38742Z' => 'bra', 'BraA09t39295Z' => 'bra', 'C02p47180' => 'bna', 'C02p50990' => 'bna', 'C03p19360' => 'bna', 'C03p74950' => 'bna', 'C03p91000' => 'bna', 'C04p63260' => 'bna', 'C05p27050' => 'bna', 'C06p08750' => 'bna', 'C06p11490' => 'bna', 'C07p02820' => 'bna', 'C07p17180' => 'bna', 'C07p29440' => 'bna', 'C07p63730' => 'bna', 'C09p39260' => 'bna', 'CAN.G1164.34' => 'can', 'CAN.G1164.39' => 'can', 'CAN.G1530.3' => 'can', 'CAN.G162.61' => 'can', 'CAN.G176.6' => 'can', 'CAN.G289.49' => 'can', 'CAN.G370.21' => 'can', 'CAN.G370.22' => 'can', 'CAN.G371.117' => 'can', 'CAN.G58.37' => 'can', 'CAN.G588.98' => 'can', 'CANSAT21G2266' => 'cansat', 'CANSAT25G2799' => 'cansat', 'CANSAT35G0862' => 'cansat', 'CANSAT35G1704' => 'cansat', 'CANSAT35G1760' => 'cansat', 'CANSAT56G3971' => 'cansat', 'CANSAT56G4116' => 'cansat', 'CANSAT80G1259' => 'cansat', 'CARHR027730' => 'chi', 'CARHR033880' => 'chi', 'CARHR043270' => 'chi', 'CARHR145330' => 'chi', 'CARHR145340' => 'chi', 'CARHR175570' => 'chi', 'CARHR181570' => 'chi', 'CARHR258470' => 'chi', 'CARHR260490' => 'chi', 'CARHR294220' => 'chi', 'Carub.0001s2668' => 'cru', 'Carub.0001s3257' => 'cru', 'Carub.0001s4220' => 'cru', 'Carub.0005s0179' => 'cru', 'Carub.0006s2807' => 'cru', 'Carub.0007s0039' => 'cru', 'Carub.0008s0169' => 'cru', 'Carub.0008s0636' => 'cru', 'Ca_00338_v3' => 'car', 'Ca_00542_v3' => 'car', 'Ca_01844_v3' => 'car', 'Ca_10611_v3' => 'car', 'Ca_13326_v3' => 'car', 'Ca_17944_v3' => 'car', 'Ca_18546_v3' => 'car', 'Ca_24219_v3' => 'car', 'Ca_29972_v3' => 'car', 'CBR_g3681' => 'cbr', 'CBR_g40021' => 'cbr', 'Cc01_g08140' => 'ccan', 'Cc02_g13410' => 'ccan', 'Cc02_g37480' => 'ccan', 'Cc05_g12030' => 'ccan', 'Cc09_g03370' => 'ccan', 'Cc09_g10300' => 'ccan', 'Cc10_g03530' => 'ccan', 'Cc10_g11380' => 'ccan', 'CDE01G0176' => 'cde', 'CDE02G0675' => 'cde', 'CDE02G0942' => 'cde', 'CDE02G1153' => 'cde', 'CDE02G4177' => 'cde', 'CDE04G2117' => 'cde', 'CDE04G2736' => 'cde', 'CDE08G1161' => 'cde', 'CDE09G1238' => 'cde', 'Cfa000467' => 'cfa', 'Cfa000947' => 'cfa', 'Cfa004969' => 'cfa', 'Cfa005284' => 'cfa', 'Cfa008993' => 'cfa', 'Cfa018187' => 'cfa', 'Cfa018454' => 'cfa', 'Cfa020585' => 'cfa', 'Ciclev10000424m.g' => 'ccl', 'Ciclev10003605m.g' => 'ccl', 'Ciclev10007828m.g' => 'ccl', 'Ciclev10014620m.g' => 'ccl', 'Ciclev10015169m.g' => 'ccl', 'Ciclev10018291m.g' => 'ccl', 'Ciclev10028256m.g' => 'ccl', 'Ciclev10033822m.g' => 'ccl', 'CiPaw.05G060300' => 'cil', 'CiPaw.05G085000' => 'cil', 'CiPaw.06G083700' => 'cil', 'CiPaw.06G120300' => 'cil', 'CiPaw.09G060500' => 'cil', 'CiPaw.09G123800' => 'cil', 'CiPaw.11G169700' => 'cil', 'CiPaw.12G118300' => 'cil', 'CiPaw.15G071000' => 'cil', 'CiPaw.15G081900' => 'cil', 'ClCG01G024610' => 'cla', 'ClCG03G006070' => 'cla', 'ClCG05G019250' => 'cla', 'ClCG09G009500' => 'cla', 'ClCG11G008200' => 'cla', 'ClCG11G018080' => 'cla', 'COL.COLO4_17373' => 'col', 'COL.COLO4_22994' => 'col', 'COL.COLO4_26389' => 'col', 'COL.COLO4_27170' => 'col', 'COL.COLO4_31074' => 'col', 'COL.COLO4_31465' => 'col', 'COL.COLO4_36438' => 'col', 'COL.COLO4_36439' => 'col', 'Cpa.g.c38781' => 'cpa', 'Cpa.g.sc128.12' => 'cpa', 'Cpa.g.sc166.7' => 'cpa', 'Cpa.g.sc166.8' => 'cpa', 'Cpa.g.sc20.111' => 'cpa', 'Cpa.g.sc27.31' => 'cpa', 'Cpa.g.sc64.36' => 'cpa', 'Cpa.g.sc64.37' => 'cpa', 'Cpa.g.sc66.49' => 'cpa', 'Cpa.g.sc80.64' => 'cpa', 'CsaV3_1G012320' => 'csa', 'CsaV3_2G008480' => 'csa', 'CsaV3_2G033450' => 'csa', 'CsaV3_3G044830' => 'csa', 'CsaV3_4G033710' => 'csa', 'CsaV3_6G051730' => 'csa', 'CsaV3_7G025350' => 'csa', 'CSS0001067' => 'camsi', 'CSS0005996' => 'camsi', 'CSS0006590' => 'camsi', 'CSS0009673' => 'camsi', 'CSS0010201' => 'camsi', 'CSS0010549' => 'camsi', 'CSS0011364' => 'camsi', 'CSS0014473' => 'camsi', 'CSS0014961' => 'camsi', 'CSS0020191' => 'camsi', 'CSS0021165' => 'camsi', 'CSS0022306' => 'camsi', 'CSS0030591' => 'camsi', 'CSS0030696' => 'camsi', 'CSS0032653' => 'camsi', 'CSS0037487' => 'camsi', 'CSS0041102' => 'camsi', 'CSS0041261' => 'camsi', 'CSS0046246' => 'camsi', 'CSS0049256' => 'camsi', 'DCAR_004075' => 'dca', 'DCAR_011538' => 'dca', 'DCAR_019553' => 'dca', 'DCAR_020952' => 'dca', 'DCAR_021739' => 'dca', 'DCAR_027407' => 'dca', 'DCAR_027913' => 'dca', 'DCAR_028066' => 'dca', 'Dinv05899' => 'din', 'Dinv07563' => 'din', 'Dinv08010' => 'din', 'Dinv14125' => 'din', 'Dinv20172' => 'din', 'Dinv30743' => 'din', 'Dinv31229' => 'din', 'Dinv34162' => 'din', 'Dinv36028' => 'din', 'Dinv39368' => 'din', 'Dinv40565' => 'din', 'Dinv41706' => 'din', 'Duzib052G0089' => 'dzi', 'Duzib116G0641' => 'dzi', 'Duzib132G0069' => 'dzi', 'Duzib132G1219' => 'dzi', 'Duzib147G0278' => 'dzi', 'Duzib160G0480' => 'dzi', 'Duzib170G0661' => 'dzi', 'Duzib177G0591' => 'dzi', 'Duzib187G1353' => 'dzi', 'Duzib192G0858' => 'dzi', 'Duzib192G0883' => 'dzi', 'Duzib213G0506' => 'dzi', 'Duzib235G0289' => 'dzi', 'Duzib251G0422' => 'dzi', 'ECA232G3898' => 'eca', 'ECA233G5950' => 'eca', 'ECA234G1699' => 'eca', 'ECA234G2421' => 'eca', 'ECA236G0426' => 'eca', 'ECA236G4331' => 'eca', 'ECA248G2573' => 'eca', 'EL10Ac1g00077' => 'bvu', 'EL10Ac1g01746' => 'bvu', 'EL10Ac2g03464' => 'bvu', 'EL10Ac4g08176' => 'bvu', 'EL10Ac7g17521' => 'bvu', 'EL10Ac8g20386' => 'bvu', 'EL10Ac9g21343' => 'bvu', 'EL10Ac9g22688' => 'bvu', 'Eucgr.B03434' => 'egr', 'Eucgr.D00618' => 'egr', 'Eucgr.E02395' => 'egr', 'Eucgr.F01129' => 'egr', 'Eucgr.F02622' => 'egr', 'Eucgr.F04207' => 'egr', 'FAN01G0570' => 'fan', 'FAN03G3351' => 'fan', 'FAN06G3702' => 'fan', 'FAN07G2149' => 'fan', 'FAN10G3758' => 'fan', 'FAN11G1170' => 'fan', 'FAN11G2050' => 'fan', 'FAN11G2724' => 'fan', 'FAN12G1700' => 'fan', 'FAN12G2028' => 'fan', 'FAN15G1160' => 'fan', 'FAN15G3063' => 'fan', 'FAN16G2540' => 'fan', 'FAN16G3077' => 'fan', 'FAN16G3624' => 'fan', 'FAN17G0221' => 'fan', 'FAN20G2492' => 'fan', 'FAN20G2905' => 'fan', 'FAN21G0548' => 'fan', 'FAN21G1300' => 'fan', 'FAN22G0077' => 'fan', 'FAN22G1315' => 'fan', 'FAN24G1280' => 'fan', 'FAN24G1445' => 'fan', 'FAN24G3527' => 'fan', 'FAN25G0464' => 'fan', 'FAN25G2885' => 'fan', 'FAN25G3270' => 'fan', 'FAN27G1101' => 'fan', 'FAN27G2846' => 'fan', 'FAN27G3524' => 'fan', 'FvH4_2g11770' => 'fve', 'FvH4_2g15630' => 'fve', 'FvH4_3g05570' => 'fve', 'FvH4_3g09110' => 'fve', 'FvH4_3g19940' => 'fve', 'FvH4_4g04821' => 'fve', 'FvH4_4g31480' => 'fve', 'FvH4_7g01740' => 'fve', 'Glyma.05G130400' => 'gma', 'Glyma.05G156400' => 'gma', 'Glyma.07G197000' => 'gma', 'Glyma.08G085151' => 'gma', 'Glyma.08G114500' => 'gma', 'Glyma.08G300400' => 'gma', 'Glyma.10G215800' => 'gma', 'Glyma.12G224400' => 'gma', 'Glyma.13G179300' => 'gma', 'Glyma.13G218151' => 'gma', 'Glyma.13G238800' => 'gma', 'Glyma.13G276900' => 'gma', 'Glyma.14G078200' => 'gma', 'Glyma.15G074500' => 'gma', 'Glyma.15G094100' => 'gma', 'Glyma.17G247200' => 'gma', 'Glyma.18G120100' => 'gma', 'Glyma.20G176000' => 'gma', 'Gohir.A01G063600' => 'ghi', 'Gohir.A01G170301' => 'ghi', 'Gohir.A02G060500' => 'ghi', 'Gohir.A05G133850' => 'ghi', 'Gohir.A05G161400' => 'ghi', 'Gohir.A06G012900' => 'ghi', 'Gohir.A06G035901' => 'ghi', 'Gohir.A06G127100' => 'ghi', 'Gohir.A06G210500' => 'ghi', 'Gohir.A08G008650' => 'ghi', 'Gohir.A09G072700' => 'ghi', 'Gohir.A09G088301' => 'ghi', 'Gohir.A10G040600' => 'ghi', 'Gohir.A12G036300' => 'ghi', 'Gohir.A12G143350' => 'ghi', 'Gohir.A12G165500' => 'ghi', 'Gohir.A13G145700' => 'ghi', 'Gohir.D01G050000' => 'ghi', 'Gohir.D01G051366' => 'ghi', 'Gohir.D01G161350' => 'ghi', 'Gohir.D02G065900' => 'ghi', 'Gohir.D05G164200' => 'ghi', 'Gohir.D05G355500' => 'ghi', 'Gohir.D06G010400' => 'ghi', 'Gohir.D06G111250' => 'ghi', 'Gohir.D06G132000' => 'ghi', 'Gohir.D06G210500' => 'ghi', 'Gohir.D07G165675' => 'ghi', 'Gohir.D08G062240' => 'ghi', 'Gohir.D08G086101' => 'ghi', 'Gohir.D08G138060' => 'ghi', 'Gohir.D09G072300' => 'ghi', 'Gohir.D10G041400' => 'ghi', 'Gohir.D11G191020' => 'ghi', 'Gohir.D11G212066' => 'ghi', 'Gohir.D12G036300' => 'ghi', 'Gohir.D12G168600' => 'ghi', 'Gohir.D13G150600' => 'ghi', 'Gorai.001G057300' => 'gra', 'Gorai.002G069900' => 'gra', 'Gorai.002G200000' => 'gra', 'Gorai.003G067600' => 'gra', 'Gorai.005G074800' => 'gra', 'Gorai.006G087300' => 'gra', 'Gorai.008G037500' => 'gra', 'Gorai.008G181400' => 'gra', 'Gorai.009G169400' => 'gra', 'Gorai.009G387900' => 'gra', 'Gorai.010G013300' => 'gra', 'Gorai.010G153800' => 'gra', 'Gorai.010G255800' => 'gra', 'Gorai.011G043700' => 'gra', 'Gorai.011G198900' => 'gra', 'Gorai.013G168400' => 'gra', 'GSVIVG01005212001' => 'vvi', 'GSVIVG01006163001' => 'vvi', 'GSVIVG01009625001' => 'vvi', 'GSVIVG01014338001' => 'vvi', 'GSVIVG01020005001' => 'vvi', 'GSVIVG01021450001' => 'vvi', 'GSVIVG01023975001' => 'vvi', 'GSVIVG01034490001' => 'vvi', 'HanXRQChr04g0112071' => 'han', 'HanXRQChr05g0131151' => 'han', 'HanXRQChr09g0262371' => 'han', 'HanXRQChr09g0268401' => 'han', 'HanXRQChr10g0279241' => 'han', 'HanXRQChr10g0297961' => 'han', 'HanXRQChr11g0326231' => 'han', 'HanXRQChr11g0328471' => 'han', 'HanXRQChr16g0507941' => 'han', 'HanXRQChr17g0560211' => 'han', 'Haze_02108' => 'cav', 'Haze_02428' => 'cav', 'Haze_05593' => 'cav', 'Haze_06448' => 'cav', 'Haze_09427' => 'cav', 'Haze_12022' => 'cav', 'Haze_17612' => 'cav', 'Haze_17928' => 'cav', 'Hma1.2p1_0032F.1_g019250' => 'hma', 'Hma1.2p1_0163F.1_g072690' => 'hma', 'Hma1.2p1_0265F.1_g106710' => 'hma', 'Hma1.2p1_0286F.1_g113970' => 'hma', 'Hma1.2p1_0363F.1_g136640' => 'hma', 'Hma1.2p1_0584F.1_g183470' => 'hma', 'Hma1.2p1_0885F.1_g232570' => 'hma', 'HPP92_006022' => 'vpl', 'HPP92_007320' => 'vpl', 'HPP92_011521' => 'vpl', 'HPP92_019387' => 'vpl', 'HPP92_024038' => 'vpl', 'Hund05891' => 'sun', 'Hund06450' => 'sun', 'Hund12053' => 'sun', 'Hund16800' => 'sun', 'Hund21222' => 'sun', 'Hund22896' => 'sun', 'Hund23746' => 'sun', 'Hund27083' => 'sun', 'Lalb_Chr02g0141831' => 'lal', 'Lalb_Chr02g0141841' => 'lal', 'Lalb_Chr05g0220411' => 'lal', 'Lalb_Chr06g0162081' => 'lal', 'Lalb_Chr09g0327651' => 'lal', 'Lalb_Chr13g0295051' => 'lal', 'Lalb_Chr15g0086801' => 'lal', 'Lalb_Chr16g0383781' => 'lal', 'Lalb_Chr16g0383791' => 'lal', 'Lalb_Chr18g0055441' => 'lal', 'Lalb_Chr18g0059611' => 'lal', 'Lalb_Chr20g0109661' => 'lal', 'Lalb_Chr20g0109831' => 'lal', 'Lalb_Chr20g0121871' => 'lal', 'Lalb_Chr22g0355361' => 'lal', 'Lalb_Chr25g0286371' => 'lal', 'Lj1A1187G43' => 'lonja', 'Lj1A1205T50' => 'lonja', 'Lj1A800G33' => 'lonja', 'Lj1C1187T7' => 'lonja', 'Lj1C843T11' => 'lonja', 'Lj1g0010940' => 'lja', 'Lj2A288T69' => 'lonja', 'Lj3g0024276' => 'lja', 'Lj4A47T76' => 'lonja', 'Lj4g0005805' => 'lja', 'Lj4g0006097' => 'lja', 'Lj4g0008528' => 'lja', 'Lj4g0024907' => 'lja', 'Lj5g0012472' => 'lja', 'Lj5g0018648' => 'lja', 'Lj6C789G1' => 'lonja', 'Lj6g0004000' => 'lja', 'Lj7A292G67' => 'lonja', 'Lj7A292T64' => 'lonja', 'Lj9A400T58' => 'lonja', 'Lsat_1_v5_gn_1_126181' => 'lsa', 'Lsat_1_v5_gn_4_123041' => 'lsa', 'Lsat_1_v5_gn_4_133620' => 'lsa', 'Lsat_1_v5_gn_4_53221' => 'lsa', 'Lsat_1_v5_gn_4_71961' => 'lsa', 'Lsat_1_v5_gn_7_105241' => 'lsa', 'Lsat_1_v5_gn_7_21361' => 'lsa', 'Lsat_1_v5_gn_7_28860' => 'lsa', 'Lsat_1_v5_gn_7_31260' => 'lsa', 'Lsat_1_v5_gn_8_52801' => 'lsa', 'Manes.02G191400' => 'mes', 'Manes.03G110100' => 'mes', 'Manes.04G071100' => 'mes', 'Manes.05G100500' => 'mes', 'Manes.05G164700' => 'mes', 'Manes.15G087000' => 'mes', 'Manes.15G121500' => 'mes', 'Manes.16G028300' => 'mes', 'Manes.17G046100' => 'mes', 'Manes.17G069800' => 'mes', 'Manes.18G100500' => 'mes', 'Mapoly0002s0109' => 'mpo', 'Mapoly0024s0007' => 'mpo', 'Mapoly0089s0032' => 'mpo', 'MBI04_g42241_MAGBIO' => 'mbi', 'MBI05_g11988_MAGBIO' => 'mbi', 'MBI05_g35452_MAGBIO' => 'mbi', 'MBI07_g30179_MAGBIO' => 'mbi', 'MBI07_g35859_MAGBIO' => 'mbi', 'MBI07_g35860_MAGBIO' => 'mbi', 'MBI07_g37166_MAGBIO' => 'mbi', 'MBI08_g18172_MAGBIO' => 'mbi', 'MBI09_g08441_MAGBIO' => 'mbi', 'MBI13_g01676_MAGBIO' => 'mbi', 'MBI14_g42955_MAGBIO' => 'mbi', 'MBI16_g13161_MAGBIO' => 'mbi', 'MBI17_g27204_MAGBIO' => 'mbi', 'MBI19_g21595_MAGBIO' => 'mbi', 'MD00G1148400' => 'mdo', 'MD02G1301200' => 'mdo', 'MD03G1227800' => 'mdo', 'MD05G1041100' => 'mdo', 'MD05G1124800' => 'mdo', 'MD05G1284000' => 'mdo', 'MD05G1338800' => 'mdo', 'MD05G1338900' => 'mdo', 'MD07G1022800' => 'mdo', 'MD10G1047500' => 'mdo', 'MD10G1127500' => 'mdo', 'MD10G1262300' => 'mdo', 'MD10G1293800' => 'mdo', 'MD16G1074300' => 'mdo', 'Medtr1g021670' => 'mtr', 'Medtr1g096320' => 'mtr', 'Medtr2g013690' => 'mtr', 'Medtr2g019450' => 'mtr', 'Medtr2g085170' => 'mtr', 'Medtr4g088785' => 'mtr', 'Medtr8g055930' => 'mtr', 'Medtr8g085850' => 'mtr', 'MELO3C002605.2' => 'cme', 'MELO3C003891.2' => 'cme', 'MELO3C004012.2' => 'cme', 'MELO3C007134.2' => 'cme', 'MELO3C008118.2' => 'cme', 'MELO3C016700.2' => 'cme', 'MELO3C024127.2' => 'cme', 'MELO3C033361.2' => 'cme', 'MELO3C033362.2' => 'cme', 'Migut.C00430' => 'egut', 'Migut.C01246' => 'egut', 'Migut.E00101' => 'egut', 'Migut.H01486' => 'egut', 'Migut.H01939' => 'egut', 'Migut.K00360' => 'egut', 'Migut.M00910' => 'egut', 'Migut.M01139' => 'egut', 'Migut.N02677' => 'egut', 'MSTRG.13252' => 'ama', 'MSTRG.14701' => 'ama', 'MSTRG.1521' => 'ama', 'MSTRG.15884' => 'ama', 'MSTRG.16242' => 'ama', 'MSTRG.22285' => 'ama', 'MSTRG.22444' => 'ama', 'MSTRG.2349' => 'ama', 'MSTRG.26308' => 'ama', 'MSTRG.28296' => 'ama', 'MSTRG.9895' => 'ama', 'Nitab4.5_0000110g0060' => 'nta', 'Nitab4.5_0000420g0130' => 'nta', 'Nitab4.5_0000422g0030' => 'nta', 'Nitab4.5_0000560g0180' => 'nta', 'Nitab4.5_0000703g0100' => 'nta', 'Nitab4.5_0000786g0200' => 'nta', 'Nitab4.5_0001336g0020' => 'nta', 'Nitab4.5_0001796g0030' => 'nta', 'Nitab4.5_0003348g0060' => 'nta', 'Nitab4.5_0003698g0040' => 'nta', 'Nitab4.5_0003942g0090' => 'nta', 'Nitab4.5_0004775g0070' => 'nta', 'Nitab4.5_0004864g0030' => 'nta', 'Nitab4.5_0005615g0020' => 'nta', 'Nitab4.5_0009288g0030' => 'nta', 'Nitab4.5_0009341g0010' => 'nta', 'Nitab4.5_0009535g0010' => 'nta', 'Nn1g03995' => 'nnu', 'Nn1g04100' => 'nnu', 'Nn1g06530' => 'nnu', 'Nn3g16404' => 'nnu', 'Nn3g17212' => 'nnu', 'Nn3g20776' => 'nnu', 'Nn3g21923' => 'nnu', 'Nn5g27737' => 'nnu', 'Nn5g29461' => 'nnu', 'Nn7g38355' => 'nnu', 'Nn8g39873' => 'nnu', 'Oeu000548.2' => 'oeu', 'Oeu004672.1' => 'oeu', 'Oeu015605.2' => 'oeu', 'Oeu016092.1' => 'oeu', 'Oeu017879.3' => 'oeu', 'Oeu024910.1' => 'oeu', 'Oeu028965.1' => 'oeu', 'Oeu031269.1' => 'oeu', 'Oeu031270.1' => 'oeu', 'Oeu032535.1' => 'oeu', 'Oeu034151.1' => 'oeu', 'Oeu034152.1' => 'oeu', 'Oeu034588.2' => 'oeu', 'Oeu050846.1' => 'oeu', 'Oeu050849.2' => 'oeu', 'Oeu051063.2' => 'oeu', 'Oeu052368.1' => 'oeu', 'Oeu052370.1' => 'oeu', 'Os01g0210400' => 'osa', 'Os01g0304300' => 'osa', 'Os01g0749100' => 'osa', 'Os02g0745800' => 'osa', 'Os03g0769050' => 'osa', 'Os05g0531500' => 'osa', 'Os06g0724300' => 'osa', 'Os11g0198100' => 'osa', 'Peaxi162Scf00069g01425' => 'pax', 'Peaxi162Scf00280g00811' => 'pax', 'Peaxi162Scf00310g00615' => 'pax', 'Peaxi162Scf00362g00542' => 'pax', 'Peaxi162Scf00461g00310' => 'pax', 'Peaxi162Scf00530g00118' => 'pax', 'Peaxi162Scf00541g00057' => 'pax', 'Peaxi162Scf00661g00017' => 'pax', 'Peaxi162Scf00926g00027' => 'pax', 'Peaxi162Scf01064g00263' => 'pax', 'Peaxi162Scf01211g00135' => 'pax', 'PGR004G2336' => 'pgr', 'PGR042G0327' => 'pgr', 'PGR042G1957' => 'pgr', 'PGR042G2003' => 'pgr', 'PGR042G3929' => 'pgr', 'PGR083G1137' => 'pgr', 'PGR083G1364' => 'pgr', 'PGSC0003DMG400003381' => 'stu', 'PGSC0003DMG400003417' => 'stu', 'PGSC0003DMG400008981' => 'stu', 'PGSC0003DMG400012417' => 'stu', 'PGSC0003DMG400012823' => 'stu', 'PGSC0003DMG400016885' => 'stu', 'PGSC0003DMG400022812' => 'stu', 'PGSC0003DMG400029726' => 'stu', 'PGSC0003DMG401009243' => 'stu', 'PGSC0003DMG401031505' => 'stu', 'PGSC0003DMG402031505' => 'stu', 'Phvul.001G017600' => 'pvu', 'Phvul.002G193500' => 'pvu', 'Phvul.002G228900' => 'pvu', 'Phvul.002G236800' => 'pvu', 'Phvul.003G049500' => 'pvu', 'Phvul.005G072000' => 'pvu', 'Phvul.006G164800' => 'pvu', 'Phvul.006G185100' => 'pvu', 'Phvul.007G090000' => 'pvu', 'Potri.001G399800' => 'ptr', 'Potri.002G149900' => 'ptr', 'Potri.004G044100' => 'ptr', 'Potri.004G177600' => 'ptr', 'Potri.009G138000' => 'ptr', 'Potri.010G094000' => 'ptr', 'Potri.011G053000' => 'ptr', 'Potri.011G119300' => 'ptr', 'Potri.013G113700' => 'ptr', 'Potri.018G107800' => 'ptr', 'Potri.019G084100' => 'ptr', 'Pp3c14_23720' => 'ppa', 'Pp3c16_6340' => 'ppa', 'Pp3c23_13420' => 'ppa', 'Pp3c24_2740' => 'ppa', 'Pp3c25_860' => 'ppa', 'Pp3c8_21750' => 'ppa', 'Prupe.1G273000' => 'ppe', 'Prupe.1G273700' => 'ppe', 'Prupe.1G274100' => 'ppe', 'Prupe.2G023300' => 'ppe', 'Prupe.4G048000' => 'ppe', 'Prupe.4G080400' => 'ppe', 'Prupe.4G181200' => 'ppe', 'Prupe.8G056900' => 'ppe', 'Prupe.8G168700' => 'ppe', 'Psat1g189080' => 'psa', 'Psat1g204760' => 'psa', 'Psat4g175560' => 'psa', 'Psat4g177720' => 'psa', 'Psat5g244240' => 'psa', 'Psat6g010720' => 'psa', 'Psat6g187200' => 'psa', 'Psat7g072040' => 'psa', 'PSO017G3501' => 'pso', 'PSO063G2148' => 'pso', 'PSO063G5608' => 'pso', 'PSO210G6392' => 'pso', 'PSO541G2319' => 'pso', 'PSO541G2836' => 'pso', 'PSO541G4012' => 'pso', 'PSO541G6253' => 'pso', 'PSO675G0580' => 'pso', 'PSO675G0856' => 'pso', 'PSO675G5635' => 'pso', 'PSO675G9157' => 'pso', 'PSO832G1660' => 'pso', 'PSO832G1969' => 'pso', 'QL02p007186' => 'qlo', 'QL02p033904' => 'qlo', 'QL03p064391' => 'qlo', 'QL05p040593' => 'qlo', 'QL05p058242' => 'qlo', 'QL08p021825' => 'qlo', 'QL11p004981' => 'qlo', 'RcHm_v2.0_Chr1g0318301' => 'rch', 'RcHm_v2.0_Chr4g0418501' => 'rch', 'RcHm_v2.0_Chr4g0439971' => 'rch', 'RcHm_v2.0_Chr5g0008541' => 'rch', 'RcHm_v2.0_Chr5g0014101' => 'rch', 'RcHm_v2.0_Chr5g0014131' => 'rch', 'RcHm_v2.0_Chr5g0033621' => 'rch', 'RcHm_v2.0_Chr6g0272041' => 'rch', 'RcHm_v2.0_Chr6g0278831' => 'rch', 'Rhsim02G0130400' => 'rsi', 'Rhsim02G0171100' => 'rsi', 'Rhsim05G0053000' => 'rsi', 'Rhsim05G0053100' => 'rsi', 'Rhsim06G0096500' => 'rsi', 'Rhsim06G0096600' => 'rsi', 'Rhsim06G0199100' => 'rsi', 'Rhsim12G0062300' => 'rsi', 'Rhsim12G0062800' => 'rsi', 'Sabra02G0118600' => 'sbr', 'Sabra04G0027300' => 'sbr', 'Sabra04G0119500' => 'sbr', 'Sabra08G0112500' => 'sbr', 'Sabra11G0036800' => 'sbr', 'Sabra11G0103800' => 'sbr', 'Sabra13G0096300' => 'sbr', 'Sabra16G0262300' => 'sbr', 'Sabra18G0091700' => 'sbr', 'Sabra19G0095400' => 'sbr', 'SalBow6G3080' => 'sbo', 'SalBow7G1157' => 'sbo', 'SalBow7G2123' => 'sbo', 'SalBow7G2285' => 'sbo', 'SalBow7G3537' => 'sbo', 'SalBow8G2947' => 'sbo', 'SalBow8G4463' => 'sbo', 'SalBow8G5466' => 'sbo', 'Sc01g0001750' => 'sci', 'Sc02g0006640' => 'sci', 'Sc02g0006670' => 'sci', 'Sc04g0008220' => 'sci', 'Sc05g0006190' => 'sci', 'Sc08g0002760' => 'sci', 'Sc17g0006170' => 'sci', 'Sc22g0002050' => 'sci', 'Sc23g0001190' => 'sci', 'Sc24g0000980' => 'sci', 'Sed0006245' => 'sed', 'Sed0007543' => 'sed', 'Sed0009411' => 'sed', 'Sed0010765' => 'sed', 'Sed0012944' => 'sed', 'Sed0014682' => 'sed', 'Sed0016174' => 'sed', 'Sed0016796' => 'sed', 'Sed0020317' => 'sed', 'Sed0021467' => 'sed', 'SEGI_01316' => 'sgi', 'SEGI_03374' => 'sgi', 'SEGI_16265' => 'sgi', 'SEGI_18569' => 'sgi', 'SEGI_20351' => 'sgi', 'SEGI_26395' => 'sgi', 'SEGI_29469' => 'sgi', 'SEGI_34771' => 'sgi', 'SEGI_36769' => 'sgi', 'SEGI_37139' => 'sgi', 'SGA_v2.0_scaffold100G29687' => 'sas', 'SGA_v2.0_scaffold118G32472' => 'sas', 'SGA_v2.0_scaffold14G07051' => 'sas', 'SGA_v2.0_scaffold183G39845' => 'sas', 'SGA_v2.0_scaffold1G00174' => 'sas', 'SGA_v2.0_scaffold22G09714' => 'sas', 'SGA_v2.0_scaffold333G48992' => 'sas', 'SGA_v2.0_scaffold46G17491' => 'sas', 'SGA_v2.0_scaffold49G18294' => 'sas', 'SGA_v2.0_scaffold63G21658' => 'sas', 'SHI01741' => 'shi', 'SHI05771' => 'shi', 'SHI18077' => 'shi', 'SHI20525' => 'shi', 'SHI20527' => 'shi', 'SHI20528' => 'shi', 'SMO172G0185' => 'smo', 'SMO198G0020' => 'smo', 'SMO351G0006' => 'smo', 'SMO356G0118' => 'smo', 'SMO358G0296' => 'smo', 'SMO367G0079' => 'smo', 'SMO367G1277' => 'smo', 'Solyc01g014220.3' => 'sly', 'Solyc01g111770.2' => 'sly', 'Solyc02g078180.3' => 'sly', 'Solyc03g006430.3' => 'sly', 'Solyc03g006456.1' => 'sly', 'Solyc03g079860.2' => 'sly', 'Solyc04g079770.3' => 'sly', 'Solyc05g007430.4' => 'sly', 'Solyc07g063150.3' => 'sly', 'Solyc08g016620.3' => 'sly', 'Solyc09g057590.3' => 'sly', 'Solyc09g057600.1' => 'sly', 'Solyc10g009050.3' => 'sly', 'Solyc11g017420.2' => 'sly', 'Sopen01g053810' => 'spe', 'Sopen02g023040' => 'spe', 'Sopen03g002440' => 'spe', 'Sopen04g033350' => 'spe', 'Sopen05g003310' => 'spe', 'Sopen07g004050' => 'spe', 'Sopen07g031340' => 'spe', 'Sopen08g006990' => 'spe', 'Sopen10g004830' => 'spe', 'Sopen11g009370' => 'spe', 'Sp1g24450' => 'spa', 'Sp1g29670' => 'spa', 'Sp1g39600' => 'spa', 'Sp2g11080' => 'spa', 'Sp2g13970' => 'spa', 'Sp4g16130' => 'spa', 'Sp6g13080' => 'spa', 'Sp7g37270' => 'spa', 'TAR371G0065' => 'tar', 'TAR376G0340' => 'tar', 'TAR376G0435' => 'tar', 'TAR381G0002' => 'tar', 'TAR381G1236' => 'tar', 'TAR624G0055' => 'tar', 'TAR624G0324' => 'tar', 'TAR624G0696' => 'tar', 'TAR624G0906' => 'tar', 'TAR625G0107' => 'tar', 'TAR626G0015' => 'tar', 'TAR626G1356' => 'tar', 'TAR627G0888' => 'tar', 'TAR628G0399' => 'tar', 'TAR628G1327' => 'tar', 'TAR629G2831' => 'tar', 'TAR629G2874' => 'tar', 'TAR633G1432' => 'tar', 'TAR633G2771' => 'tar', 'THA.LOC104803394' => 'tha', 'THA.LOC104805153' => 'tha', 'THA.LOC104806784' => 'tha', 'THA.LOC104810473' => 'tha', 'THA.LOC104813100' => 'tha', 'THA.LOC104814215' => 'tha', 'THA.LOC104815554' => 'tha', 'THA.LOC104820544' => 'tha', 'THA.LOC104824754' => 'tha', 'THA.LOC104827717' => 'tha', 'Thecc.02G031400' => 'tca', 'Thecc.02G055900' => 'tca', 'Thecc.02G350800' => 'tca', 'Thecc.06G150900' => 'tca', 'Thecc.06G186600' => 'tca', 'Thecc.07G089600' => 'tca', 'Thecc.08G020400' => 'tca', 'Thecc.08G182100' => 'tca', 'Thhalv10000873m.g' => 'esa', 'Thhalv10004185m.g' => 'esa', 'Thhalv10006981m.g' => 'esa', 'Thhalv10007204m.g' => 'esa', 'Thhalv10011374m.g' => 'esa', 'Thhalv10013482m.g' => 'esa', 'Thhalv10017801m.g' => 'esa', 'Thhalv10024983m.g' => 'esa', 'TPR.G12072' => 'tpr', 'TPR.G15769' => 'tpr', 'TPR.G16504' => 'tpr', 'TPR.G16506' => 'tpr', 'TPR.G24345' => 'tpr', 'TPR.G26666' => 'tpr', 'TPR.G27320' => 'tpr', 'TPR.G31819' => 'tpr', 'TPR.G38879' => 'tpr', 'TPR.G39015' => 'tpr', 'TPR.G8819' => 'tpr', 'TWI09G0924' => 'twi', 'TWI12G0811' => 'twi', 'TWI12G1294' => 'twi', 'TWI31G0150' => 'twi', 'TWI36G1262' => 'twi', 'TWI38G1287' => 'twi', 'TWI38G1633' => 'twi', 'TWI38G1982' => 'twi', 'TWI39G0116' => 'twi', 'TWI60G1011' => 'twi', 'TWI63G0171' => 'twi', 'TWI73G0839' => 'twi', 'TWI79G1511' => 'twi', 'unitig_0.g915' => 'ugi', 'unitig_0.g916' => 'ugi', 'unitig_21.g20219' => 'ugi', 'unitig_21.g20416' => 'ugi', 'unitig_578.g16132' => 'ugi', 'unitig_578.g16718' => 'ugi', 'unitig_62.g23481' => 'ugi', 'unitig_744.g24535' => 'ugi', 'unitig_749.g13525' => 'ugi', 'vmacro01248' => 'vma', 'vmacro02290' => 'vma', 'vmacro10946' => 'vma', 'vmacro11865' => 'vma', 'vmacro12493' => 'vma', 'vmacro17322' => 'vma', 'vmacro21599' => 'vma', 'vmacro23041' => 'vma', 'VMungo0251G0004' => 'vmu', 'VMungo0251G2639' => 'vmu', 'VMungo0251G2967' => 'vmu', 'VMungo0540G0864' => 'vmu', 'VMungo0540G1569' => 'vmu', 'VMungo0647G0317' => 'vmu', 'VMungo0720G1373' => 'vmu', 'VMungo0720G1508' => 'vmu', 'VMungo1080G0485' => 'vmu', 'VMungo1215G3177' => 'vmu', 'Zm00001eb112600' => 'zma', 'Zm00001eb120220' => 'zma', 'Zm00001eb153240' => 'zma', 'Zm00001eb168880' => 'zma', 'Zm00001eb213920' => 'zma', 'Zm00001eb228280' => 'zma', 'Zm00001eb254580' => 'zma', 'Zm00001eb272180' => 'zma', 'Zm00001eb293190' => 'zma', 'Zm00001eb322930' => 'zma', 'Zm00001eb353360' => 'zma', 'Zm00001eb353390' => 'zma', 'Zm00001eb353430' => 'zma', 'Zm00001eb353440' => 'zma', 'Zm00001eb353780' => 'zma' ) $gf_id = 'HOM05D000499' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000499' ) $data_identifier = 'HOM05D000499' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 29, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 12, 'amhyb' => (int) 8, 'aly' => (int) 12, 'aox' => (int) 9, 'arhy' => (int) 26, 'ath' => (int) 8, 'atr' => (int) 7, 'acertr' => (int) 10, 'cqu' => (int) 15, 'bca' => (int) 29, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 11, 'cansat' => (int) 8, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 9, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 8, 'cpa' => (int) 10, 'csa' => (int) 7, 'camsi' => (int) 20, 'dca' => (int) 8, 'din' => (int) 12, 'dzi' => (int) 14, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 6, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 38, 'gra' => (int) 16, 'vvi' => (int) 8, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 5, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 11, 'lja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 11, 'mpo' => (int) 3, 'mbi' => (int) 14, 'mdo' => (int) 14, 'mtr' => (int) 8, 'cme' => (int) 9, 'egut' => (int) 9, 'ama' => (int) 11, 'nta' => (int) 17, 'nnu' => (int) 11, 'oeu' => (int) 18, 'osa' => (int) 8, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 6, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 9, 'rsi' => (int) 9, 'sbr' => (int) 10, 'sbo' => (int) 8, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 10, 'sas' => (int) 10, 'shi' => (int) 6, 'smo' => (int) 7, 'sly' => (int) 14, 'spe' => (int) 10, 'spa' => (int) 8, 'tar' => (int) 19, 'tha' => (int) 10, 'tca' => (int) 8, 'esa' => (int) 8, 'tpr' => (int) 11, 'twi' => (int) 13, 'ugi' => (int) 9, 'vma' => (int) 8, 'vmu' => (int) 10, 'zma' => (int) 15 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb353780' $species_info = array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ) $local_species = 'fve' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000499', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1066', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p29780' => 'bna', 'A02p33180' => 'bna', 'A03p16470' => 'bna', 'A03p66010' => 'bna', 'A04p25970' => 'bna', 'A06p01270' => 'bna', 'A06p46080' => 'bna', 'A07p11400' => 'bna', 'A08p01840' => 'bna', 'A08p08230' => 'bna', 'A08p25740' => 'bna', 'A09p32070' => 'bna', 'A09p37830' => 'bna', 'A09p42840' => 'bna', 'A09p42850' => 'bna', 'Aa31LG10G2060' => 'aar', 'Aa31LG2G7410' => 'aar', 'Aa31LG6G10200' => 'aar', 'Aa31LG6G16680' => 'aar', 'Aa31LG6G8470' => 'aar', 'Aa31LG9G12730' => 'aar', 'Aa31LG9G13680' => 'aar', 'Aa31LG9G14920' => 'aar', 'Aa31LG9G6650' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4977' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5467' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3254' => 'aag', 'Actinidia02578' => 'ach', 'Actinidia07693' => 'ach', 'Actinidia08413' => 'ach', 'Actinidia08414' => 'ach', 'Actinidia15289' => 'ach', 'Actinidia19871' => 'ach', 'Actinidia21475' => 'ach', 'Actinidia22576' => 'ach', 'Actinidia28327' => 'ach', 'Actinidia32491' => 'ach', 'Actinidia39463' => 'ach', 'Actinidia39571' => 'ach', 'Ah.01g013750' => 'amhyb', 'Ah.01g023210' => 'amhyb', 'Ah.04g164850' => 'amhyb', 'Ah.05g178060' => 'amhyb', 'Ah.07g204270' => 'amhyb', 'Ah.07g208480' => 'amhyb', 'Ah.09g237410' => 'amhyb', 'Ah.14g089460' => 'amhyb', 'AL1G41790' => 'aly', 'AL1G49050' => 'aly', 'AL1G53810' => 'aly', 'AL1G61400' => 'aly', 'AL4G18580' => 'aly', 'AL5G12510' => 'aly', 'AL5G12540' => 'aly', 'AL6G43230' => 'aly', 'AL7G10370' => 'aly', 'AL7G19250' => 'aly', 'AL8G12240' => 'aly', 'AL8G18540' => 'aly', 'Aqoxy1G02409' => 'aox', 'Aqoxy2G03993' => 'aox', 'Aqoxy3G03357' => 'aox', 'Aqoxy4G00785' => 'aox', 'Aqoxy5G02598' => 'aox', 'Aqoxy6G00132' => 'aox', 'Aqoxy7G01776' => 'aox', 'Aqoxy7G02316' => 'aox', 'Aqoxy7G03973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.12AFKW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B8730' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27IQR1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3F75VG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3RE0GA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41TCQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.527VTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FIR39' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5W8UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DA38EV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ63HS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H1I32C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HC27T5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4M8AP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7N3CZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9UVDZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LS1NQA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT1D4B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SKC4TM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCFV76' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF9Q1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQWD9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1ZM88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WE07RT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YCK7VH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJE6Q6' => 'arhy', 'AT1G28240' => 'ath', 'AT1G34550' => 'ath', 'AT1G53040' => 'ath', 'AT2G02910' => 'ath', 'AT4G09630' => 'ath', 'AT4G38500' => 'ath', 'AT5G42660' => 'ath', 'AT5G46220' => 'ath', 'ATR0152G026' => 'atr', 'ATR0564G343' => 'atr', 'ATR0706G151' => 'atr', 'ATR0733G207' => 'atr', 'ATR0751G234' => 'atr', 'ATR0807G048' => 'atr', 'ATR1091G084' => 'atr', 'Atru.chr10.1229' => 'acertr', 'Atru.chr10.1230' => 'acertr', 'Atru.chr10.1874' => 'acertr', 'Atru.chr11.1808' => 'acertr', 'Atru.chr13.1795' => 'acertr', 'Atru.chr13.570' => 'acertr', 'Atru.chr2.2608' => 'acertr', 'Atru.chr2.2609' => 'acertr', 'Atru.chr5.3428' => 'acertr', 'Atru.chr8.1171' => 'acertr', 'AUR62004651' => 'cqu', 'AUR62008675' => 'cqu', 'AUR62010014' => 'cqu', 'AUR62013004' => 'cqu', 'AUR62014825' => 'cqu', 'AUR62015015' => 'cqu', 'AUR62015151' => 'cqu', 'AUR62017020' => 'cqu', 'AUR62019422' => 'cqu', 'AUR62023570' => 'cqu', 'AUR62025571' => 'cqu', 'AUR62029098' => 'cqu', 'AUR62033863' => 'cqu', 'AUR62034296' => 'cqu', 'AUR62040075' => 'cqu', 'BcaB02g07334' => 'bca', 'BcaB02g10575' => 'bca', 'BcaB03g12119' => 'bca', 'BcaB03g12120' => 'bca', 'BcaB03g13945' => 'bca', 'BcaB04g17123' => 'bca', 'BcaB04g17867' => 'bca', 'BcaB04g19839' => 'bca', 'BcaB07g30317' => 'bca', 'BcaB07g32432' => 'bca', 'BcaB07g33362' => 'bca', 'BcaB08g36611' => 'bca', 'BcaC01g00028' => 'bca', 'BcaC01g01356' => 'bca', 'BcaC01g02034' => 'bca', 'BcaC01g06051' => 'bca', 'BcaC03g16839' => 'bca', 'BcaC03g17176' => 'bca', 'BcaC05g26829' => 'bca', 'BcaC06g31490' => 'bca', 'BcaC06g35344' => 'bca', 'BcaC06g36570' => 'bca', 'BcaC07g37537' => 'bca', 'BcaC08g43491' => 'bca', 'BcaC08g43773' => 'bca', 'BcaNung00234' => 'bca', 'BcaNung01982' => 'bca', 'BcaNung03707' => 'bca', 'BcaNung06454' => 'bca', 'BolC2t10762H' => 'bol', 'BolC2t11191H' => 'bol', 'BolC3t14322H' => 'bol', 'BolC3t19747H' => 'bol', 'BolC3t21425H' => 'bol', 'BolC4t27800H' => 'bol', 'BolC5t31423H' => 'bol', 'BolC6t35951H' => 'bol', 'BolC6t36282H' => 'bol', 'BolC7t40678H' => 'bol', 'BolC7t40679H' => 'bol', 'BolC7t42222H' => 'bol', 'BolC7t43492H' => 'bol', 'BolC7t46785H' => 'bol', 'BolC8t47853H' => 'bol', 'BolC9t56805H' => 'bol', 'BraA02t08000Z' => 'bra', 'BraA02t08341Z' => 'bra', 'BraA03t10936Z' => 'bra', 'BraA03t15657Z' => 'bra', 'BraA04t18100Z' => 'bra', 'BraA05t20523Z' => 'bra', 'BraA06t23353Z' => 'bra', 'BraA06t27473Z' => 'bra', 'BraA06t27769Z' => 'bra', 'BraA07t28928Z' => 'bra', 'BraA08t32236Z' => 'bra', 'BraA08t32841Z' => 'bra', 'BraA08t34524Z' => 'bra', 'BraA09t38742Z' => 'bra', 'BraA09t39295Z' => 'bra', 'C02p47180' => 'bna', 'C02p50990' => 'bna', 'C03p19360' => 'bna', 'C03p74950' => 'bna', 'C03p91000' => 'bna', 'C04p63260' => 'bna', 'C05p27050' => 'bna', 'C06p08750' => 'bna', 'C06p11490' => 'bna', 'C07p02820' => 'bna', 'C07p17180' => 'bna', 'C07p29440' => 'bna', 'C07p63730' => 'bna', 'C09p39260' => 'bna', 'CAN.G1164.34' => 'can', 'CAN.G1164.39' => 'can', 'CAN.G1530.3' => 'can', 'CAN.G162.61' => 'can', 'CAN.G176.6' => 'can', 'CAN.G289.49' => 'can', 'CAN.G370.21' => 'can', 'CAN.G370.22' => 'can', 'CAN.G371.117' => 'can', 'CAN.G58.37' => 'can', 'CAN.G588.98' => 'can', 'CANSAT21G2266' => 'cansat', 'CANSAT25G2799' => 'cansat', 'CANSAT35G0862' => 'cansat', 'CANSAT35G1704' => 'cansat', 'CANSAT35G1760' => 'cansat', 'CANSAT56G3971' => 'cansat', 'CANSAT56G4116' => 'cansat', 'CANSAT80G1259' => 'cansat', 'CARHR027730' => 'chi', 'CARHR033880' => 'chi', 'CARHR043270' => 'chi', 'CARHR145330' => 'chi', 'CARHR145340' => 'chi', 'CARHR175570' => 'chi', 'CARHR181570' => 'chi', 'CARHR258470' => 'chi', 'CARHR260490' => 'chi', 'CARHR294220' => 'chi', 'Carub.0001s2668' => 'cru', 'Carub.0001s3257' => 'cru', 'Carub.0001s4220' => 'cru', 'Carub.0005s0179' => 'cru', 'Carub.0006s2807' => 'cru', 'Carub.0007s0039' => 'cru', 'Carub.0008s0169' => 'cru', 'Carub.0008s0636' => 'cru', 'Ca_00338_v3' => 'car', 'Ca_00542_v3' => 'car', 'Ca_01844_v3' => 'car', 'Ca_10611_v3' => 'car', 'Ca_13326_v3' => 'car', 'Ca_17944_v3' => 'car', 'Ca_18546_v3' => 'car', 'Ca_24219_v3' => 'car', 'Ca_29972_v3' => 'car', 'CBR_g3681' => 'cbr', 'CBR_g40021' => 'cbr', 'Cc01_g08140' => 'ccan', 'Cc02_g13410' => 'ccan', 'Cc02_g37480' => 'ccan', 'Cc05_g12030' => 'ccan', 'Cc09_g03370' => 'ccan', 'Cc09_g10300' => 'ccan', 'Cc10_g03530' => 'ccan', 'Cc10_g11380' => 'ccan', 'CDE01G0176' => 'cde', 'CDE02G0675' => 'cde', 'CDE02G0942' => 'cde', 'CDE02G1153' => 'cde', 'CDE02G4177' => 'cde', 'CDE04G2117' => 'cde', 'CDE04G2736' => 'cde', 'CDE08G1161' => 'cde', 'CDE09G1238' => 'cde', 'Cfa000467' => 'cfa', 'Cfa000947' => 'cfa', 'Cfa004969' => 'cfa', 'Cfa005284' => 'cfa', 'Cfa008993' => 'cfa', 'Cfa018187' => 'cfa', 'Cfa018454' => 'cfa', 'Cfa020585' => 'cfa', 'Ciclev10000424m.g' => 'ccl', 'Ciclev10003605m.g' => 'ccl', 'Ciclev10007828m.g' => 'ccl', 'Ciclev10014620m.g' => 'ccl', 'Ciclev10015169m.g' => 'ccl', 'Ciclev10018291m.g' => 'ccl', 'Ciclev10028256m.g' => 'ccl', 'Ciclev10033822m.g' => 'ccl', 'CiPaw.05G060300' => 'cil', 'CiPaw.05G085000' => 'cil', 'CiPaw.06G083700' => 'cil', 'CiPaw.06G120300' => 'cil', 'CiPaw.09G060500' => 'cil', 'CiPaw.09G123800' => 'cil', 'CiPaw.11G169700' => 'cil', 'CiPaw.12G118300' => 'cil', 'CiPaw.15G071000' => 'cil', 'CiPaw.15G081900' => 'cil', 'ClCG01G024610' => 'cla', 'ClCG03G006070' => 'cla', 'ClCG05G019250' => 'cla', 'ClCG09G009500' => 'cla', 'ClCG11G008200' => 'cla', 'ClCG11G018080' => 'cla', 'COL.COLO4_17373' => 'col', 'COL.COLO4_22994' => 'col', 'COL.COLO4_26389' => 'col', 'COL.COLO4_27170' => 'col', 'COL.COLO4_31074' => 'col', 'COL.COLO4_31465' => 'col', 'COL.COLO4_36438' => 'col', 'COL.COLO4_36439' => 'col', 'Cpa.g.c38781' => 'cpa', 'Cpa.g.sc128.12' => 'cpa', 'Cpa.g.sc166.7' => 'cpa', 'Cpa.g.sc166.8' => 'cpa', 'Cpa.g.sc20.111' => 'cpa', 'Cpa.g.sc27.31' => 'cpa', 'Cpa.g.sc64.36' => 'cpa', 'Cpa.g.sc64.37' => 'cpa', 'Cpa.g.sc66.49' => 'cpa', 'Cpa.g.sc80.64' => 'cpa', 'CsaV3_1G012320' => 'csa', 'CsaV3_2G008480' => 'csa', 'CsaV3_2G033450' => 'csa', 'CsaV3_3G044830' => 'csa', 'CsaV3_4G033710' => 'csa', 'CsaV3_6G051730' => 'csa', 'CsaV3_7G025350' => 'csa', 'CSS0001067' => 'camsi', 'CSS0005996' => 'camsi', 'CSS0006590' => 'camsi', 'CSS0009673' => 'camsi', 'CSS0010201' => 'camsi', 'CSS0010549' => 'camsi', 'CSS0011364' => 'camsi', 'CSS0014473' => 'camsi', 'CSS0014961' => 'camsi', 'CSS0020191' => 'camsi', 'CSS0021165' => 'camsi', 'CSS0022306' => 'camsi', 'CSS0030591' => 'camsi', 'CSS0030696' => 'camsi', 'CSS0032653' => 'camsi', 'CSS0037487' => 'camsi', 'CSS0041102' => 'camsi', 'CSS0041261' => 'camsi', 'CSS0046246' => 'camsi', 'CSS0049256' => 'camsi', 'DCAR_004075' => 'dca', 'DCAR_011538' => 'dca', 'DCAR_019553' => 'dca', 'DCAR_020952' => 'dca', 'DCAR_021739' => 'dca', 'DCAR_027407' => 'dca', 'DCAR_027913' => 'dca', 'DCAR_028066' => 'dca', 'Dinv05899' => 'din', 'Dinv07563' => 'din', 'Dinv08010' => 'din', 'Dinv14125' => 'din', 'Dinv20172' => 'din', 'Dinv30743' => 'din', 'Dinv31229' => 'din', 'Dinv34162' => 'din', 'Dinv36028' => 'din', 'Dinv39368' => 'din', 'Dinv40565' => 'din', 'Dinv41706' => 'din', 'Duzib052G0089' => 'dzi', 'Duzib116G0641' => 'dzi', 'Duzib132G0069' => 'dzi', 'Duzib132G1219' => 'dzi', 'Duzib147G0278' => 'dzi', 'Duzib160G0480' => 'dzi', 'Duzib170G0661' => 'dzi', 'Duzib177G0591' => 'dzi', 'Duzib187G1353' => 'dzi', 'Duzib192G0858' => 'dzi', 'Duzib192G0883' => 'dzi', 'Duzib213G0506' => 'dzi', 'Duzib235G0289' => 'dzi', 'Duzib251G0422' => 'dzi', 'ECA232G3898' => 'eca', 'ECA233G5950' => 'eca', 'ECA234G1699' => 'eca', 'ECA234G2421' => 'eca', 'ECA236G0426' => 'eca', 'ECA236G4331' => 'eca', 'ECA248G2573' => 'eca', 'EL10Ac1g00077' => 'bvu', 'EL10Ac1g01746' => 'bvu', 'EL10Ac2g03464' => 'bvu', 'EL10Ac4g08176' => 'bvu', 'EL10Ac7g17521' => 'bvu', 'EL10Ac8g20386' => 'bvu', 'EL10Ac9g21343' => 'bvu', 'EL10Ac9g22688' => 'bvu', 'Eucgr.B03434' => 'egr', 'Eucgr.D00618' => 'egr', 'Eucgr.E02395' => 'egr', 'Eucgr.F01129' => 'egr', 'Eucgr.F02622' => 'egr', 'Eucgr.F04207' => 'egr', 'FAN01G0570' => 'fan', 'FAN03G3351' => 'fan', 'FAN06G3702' => 'fan', 'FAN07G2149' => 'fan', 'FAN10G3758' => 'fan', 'FAN11G1170' => 'fan', 'FAN11G2050' => 'fan', 'FAN11G2724' => 'fan', 'FAN12G1700' => 'fan', 'FAN12G2028' => 'fan', 'FAN15G1160' => 'fan', 'FAN15G3063' => 'fan', 'FAN16G2540' => 'fan', 'FAN16G3077' => 'fan', 'FAN16G3624' => 'fan', 'FAN17G0221' => 'fan', 'FAN20G2492' => 'fan', 'FAN20G2905' => 'fan', 'FAN21G0548' => 'fan', 'FAN21G1300' => 'fan', 'FAN22G0077' => 'fan', 'FAN22G1315' => 'fan', 'FAN24G1280' => 'fan', 'FAN24G1445' => 'fan', 'FAN24G3527' => 'fan', 'FAN25G0464' => 'fan', 'FAN25G2885' => 'fan', 'FAN25G3270' => 'fan', 'FAN27G1101' => 'fan', 'FAN27G2846' => 'fan', 'FAN27G3524' => 'fan', 'FvH4_2g11770' => 'fve', 'FvH4_2g15630' => 'fve', 'FvH4_3g05570' => 'fve', 'FvH4_3g09110' => 'fve', 'FvH4_3g19940' => 'fve', 'FvH4_4g04821' => 'fve', 'FvH4_4g31480' => 'fve', 'FvH4_7g01740' => 'fve', 'Glyma.05G130400' => 'gma', 'Glyma.05G156400' => 'gma', 'Glyma.07G197000' => 'gma', 'Glyma.08G085151' => 'gma', 'Glyma.08G114500' => 'gma', 'Glyma.08G300400' => 'gma', 'Glyma.10G215800' => 'gma', 'Glyma.12G224400' => 'gma', 'Glyma.13G179300' => 'gma', 'Glyma.13G218151' => 'gma', 'Glyma.13G238800' => 'gma', 'Glyma.13G276900' => 'gma', 'Glyma.14G078200' => 'gma', 'Glyma.15G074500' => 'gma', 'Glyma.15G094100' => 'gma', 'Glyma.17G247200' => 'gma', 'Glyma.18G120100' => 'gma', 'Glyma.20G176000' => 'gma', 'Gohir.A01G063600' => 'ghi', 'Gohir.A01G170301' => 'ghi', 'Gohir.A02G060500' => 'ghi', 'Gohir.A05G133850' => 'ghi', 'Gohir.A05G161400' => 'ghi', 'Gohir.A06G012900' => 'ghi', 'Gohir.A06G035901' => 'ghi', 'Gohir.A06G127100' => 'ghi', 'Gohir.A06G210500' => 'ghi', 'Gohir.A08G008650' => 'ghi', 'Gohir.A09G072700' => 'ghi', 'Gohir.A09G088301' => 'ghi', 'Gohir.A10G040600' => 'ghi', 'Gohir.A12G036300' => 'ghi', 'Gohir.A12G143350' => 'ghi', 'Gohir.A12G165500' => 'ghi', 'Gohir.A13G145700' => 'ghi', 'Gohir.D01G050000' => 'ghi', 'Gohir.D01G051366' => 'ghi', 'Gohir.D01G161350' => 'ghi', 'Gohir.D02G065900' => 'ghi', 'Gohir.D05G164200' => 'ghi', 'Gohir.D05G355500' => 'ghi', 'Gohir.D06G010400' => 'ghi', 'Gohir.D06G111250' => 'ghi', 'Gohir.D06G132000' => 'ghi', 'Gohir.D06G210500' => 'ghi', 'Gohir.D07G165675' => 'ghi', 'Gohir.D08G062240' => 'ghi', 'Gohir.D08G086101' => 'ghi', 'Gohir.D08G138060' => 'ghi', 'Gohir.D09G072300' => 'ghi', 'Gohir.D10G041400' => 'ghi', 'Gohir.D11G191020' => 'ghi', 'Gohir.D11G212066' => 'ghi', 'Gohir.D12G036300' => 'ghi', 'Gohir.D12G168600' => 'ghi', 'Gohir.D13G150600' => 'ghi', 'Gorai.001G057300' => 'gra', 'Gorai.002G069900' => 'gra', 'Gorai.002G200000' => 'gra', 'Gorai.003G067600' => 'gra', 'Gorai.005G074800' => 'gra', 'Gorai.006G087300' => 'gra', 'Gorai.008G037500' => 'gra', 'Gorai.008G181400' => 'gra', 'Gorai.009G169400' => 'gra', 'Gorai.009G387900' => 'gra', 'Gorai.010G013300' => 'gra', 'Gorai.010G153800' => 'gra', 'Gorai.010G255800' => 'gra', 'Gorai.011G043700' => 'gra', 'Gorai.011G198900' => 'gra', 'Gorai.013G168400' => 'gra', 'GSVIVG01005212001' => 'vvi', 'GSVIVG01006163001' => 'vvi', 'GSVIVG01009625001' => 'vvi', 'GSVIVG01014338001' => 'vvi', 'GSVIVG01020005001' => 'vvi', 'GSVIVG01021450001' => 'vvi', 'GSVIVG01023975001' => 'vvi', 'GSVIVG01034490001' => 'vvi', 'HanXRQChr04g0112071' => 'han', 'HanXRQChr05g0131151' => 'han', 'HanXRQChr09g0262371' => 'han', 'HanXRQChr09g0268401' => 'han', 'HanXRQChr10g0279241' => 'han', 'HanXRQChr10g0297961' => 'han', 'HanXRQChr11g0326231' => 'han', 'HanXRQChr11g0328471' => 'han', 'HanXRQChr16g0507941' => 'han', 'HanXRQChr17g0560211' => 'han', 'Haze_02108' => 'cav', 'Haze_02428' => 'cav', 'Haze_05593' => 'cav', 'Haze_06448' => 'cav', 'Haze_09427' => 'cav', 'Haze_12022' => 'cav', 'Haze_17612' => 'cav', 'Haze_17928' => 'cav', 'Hma1.2p1_0032F.1_g019250' => 'hma', 'Hma1.2p1_0163F.1_g072690' => 'hma', 'Hma1.2p1_0265F.1_g106710' => 'hma', 'Hma1.2p1_0286F.1_g113970' => 'hma', 'Hma1.2p1_0363F.1_g136640' => 'hma', 'Hma1.2p1_0584F.1_g183470' => 'hma', 'Hma1.2p1_0885F.1_g232570' => 'hma', 'HPP92_006022' => 'vpl', 'HPP92_007320' => 'vpl', 'HPP92_011521' => 'vpl', 'HPP92_019387' => 'vpl', 'HPP92_024038' => 'vpl', 'Hund05891' => 'sun', 'Hund06450' => 'sun', 'Hund12053' => 'sun', 'Hund16800' => 'sun', 'Hund21222' => 'sun', 'Hund22896' => 'sun', 'Hund23746' => 'sun', 'Hund27083' => 'sun', 'Lalb_Chr02g0141831' => 'lal', 'Lalb_Chr02g0141841' => 'lal', 'Lalb_Chr05g0220411' => 'lal', 'Lalb_Chr06g0162081' => 'lal', 'Lalb_Chr09g0327651' => 'lal', 'Lalb_Chr13g0295051' => 'lal', 'Lalb_Chr15g0086801' => 'lal', 'Lalb_Chr16g0383781' => 'lal', 'Lalb_Chr16g0383791' => 'lal', 'Lalb_Chr18g0055441' => 'lal', 'Lalb_Chr18g0059611' => 'lal', 'Lalb_Chr20g0109661' => 'lal', 'Lalb_Chr20g0109831' => 'lal', 'Lalb_Chr20g0121871' => 'lal', 'Lalb_Chr22g0355361' => 'lal', 'Lalb_Chr25g0286371' => 'lal', 'Lj1A1187G43' => 'lonja', 'Lj1A1205T50' => 'lonja', 'Lj1A800G33' => 'lonja', 'Lj1C1187T7' => 'lonja', 'Lj1C843T11' => 'lonja', 'Lj1g0010940' => 'lja', 'Lj2A288T69' => 'lonja', 'Lj3g0024276' => 'lja', 'Lj4A47T76' => 'lonja', 'Lj4g0005805' => 'lja', 'Lj4g0006097' => 'lja', 'Lj4g0008528' => 'lja', 'Lj4g0024907' => 'lja', 'Lj5g0012472' => 'lja', 'Lj5g0018648' => 'lja', 'Lj6C789G1' => 'lonja', 'Lj6g0004000' => 'lja', 'Lj7A292G67' => 'lonja', 'Lj7A292T64' => 'lonja', 'Lj9A400T58' => 'lonja', 'Lsat_1_v5_gn_1_126181' => 'lsa', 'Lsat_1_v5_gn_4_123041' => 'lsa', 'Lsat_1_v5_gn_4_133620' => 'lsa', 'Lsat_1_v5_gn_4_53221' => 'lsa', 'Lsat_1_v5_gn_4_71961' => 'lsa', 'Lsat_1_v5_gn_7_105241' => 'lsa', 'Lsat_1_v5_gn_7_21361' => 'lsa', 'Lsat_1_v5_gn_7_28860' => 'lsa', 'Lsat_1_v5_gn_7_31260' => 'lsa', 'Lsat_1_v5_gn_8_52801' => 'lsa', 'Manes.02G191400' => 'mes', 'Manes.03G110100' => 'mes', 'Manes.04G071100' => 'mes', 'Manes.05G100500' => 'mes', 'Manes.05G164700' => 'mes', 'Manes.15G087000' => 'mes', 'Manes.15G121500' => 'mes', 'Manes.16G028300' => 'mes', 'Manes.17G046100' => 'mes', 'Manes.17G069800' => 'mes', 'Manes.18G100500' => 'mes', 'Mapoly0002s0109' => 'mpo', 'Mapoly0024s0007' => 'mpo', 'Mapoly0089s0032' => 'mpo', 'MBI04_g42241_MAGBIO' => 'mbi', 'MBI05_g11988_MAGBIO' => 'mbi', 'MBI05_g35452_MAGBIO' => 'mbi', 'MBI07_g30179_MAGBIO' => 'mbi', 'MBI07_g35859_MAGBIO' => 'mbi', 'MBI07_g35860_MAGBIO' => 'mbi', 'MBI07_g37166_MAGBIO' => 'mbi', 'MBI08_g18172_MAGBIO' => 'mbi', 'MBI09_g08441_MAGBIO' => 'mbi', 'MBI13_g01676_MAGBIO' => 'mbi', 'MBI14_g42955_MAGBIO' => 'mbi', 'MBI16_g13161_MAGBIO' => 'mbi', 'MBI17_g27204_MAGBIO' => 'mbi', 'MBI19_g21595_MAGBIO' => 'mbi', 'MD00G1148400' => 'mdo', 'MD02G1301200' => 'mdo', 'MD03G1227800' => 'mdo', 'MD05G1041100' => 'mdo', 'MD05G1124800' => 'mdo', 'MD05G1284000' => 'mdo', 'MD05G1338800' => 'mdo', 'MD05G1338900' => 'mdo', 'MD07G1022800' => 'mdo', 'MD10G1047500' => 'mdo', 'MD10G1127500' => 'mdo', 'MD10G1262300' => 'mdo', 'MD10G1293800' => 'mdo', 'MD16G1074300' => 'mdo', 'Medtr1g021670' => 'mtr', 'Medtr1g096320' => 'mtr', 'Medtr2g013690' => 'mtr', 'Medtr2g019450' => 'mtr', 'Medtr2g085170' => 'mtr', 'Medtr4g088785' => 'mtr', 'Medtr8g055930' => 'mtr', 'Medtr8g085850' => 'mtr', 'MELO3C002605.2' => 'cme', 'MELO3C003891.2' => 'cme', 'MELO3C004012.2' => 'cme', 'MELO3C007134.2' => 'cme', 'MELO3C008118.2' => 'cme', 'MELO3C016700.2' => 'cme', 'MELO3C024127.2' => 'cme', 'MELO3C033361.2' => 'cme', 'MELO3C033362.2' => 'cme', 'Migut.C00430' => 'egut', 'Migut.C01246' => 'egut', 'Migut.E00101' => 'egut', 'Migut.H01486' => 'egut', 'Migut.H01939' => 'egut', 'Migut.K00360' => 'egut', 'Migut.M00910' => 'egut', 'Migut.M01139' => 'egut', 'Migut.N02677' => 'egut', 'MSTRG.13252' => 'ama', 'MSTRG.14701' => 'ama', 'MSTRG.1521' => 'ama', 'MSTRG.15884' => 'ama', 'MSTRG.16242' => 'ama', 'MSTRG.22285' => 'ama', 'MSTRG.22444' => 'ama', 'MSTRG.2349' => 'ama', 'MSTRG.26308' => 'ama', 'MSTRG.28296' => 'ama', 'MSTRG.9895' => 'ama', 'Nitab4.5_0000110g0060' => 'nta', 'Nitab4.5_0000420g0130' => 'nta', 'Nitab4.5_0000422g0030' => 'nta', 'Nitab4.5_0000560g0180' => 'nta', 'Nitab4.5_0000703g0100' => 'nta', 'Nitab4.5_0000786g0200' => 'nta', 'Nitab4.5_0001336g0020' => 'nta', 'Nitab4.5_0001796g0030' => 'nta', 'Nitab4.5_0003348g0060' => 'nta', 'Nitab4.5_0003698g0040' => 'nta', 'Nitab4.5_0003942g0090' => 'nta', 'Nitab4.5_0004775g0070' => 'nta', 'Nitab4.5_0004864g0030' => 'nta', 'Nitab4.5_0005615g0020' => 'nta', 'Nitab4.5_0009288g0030' => 'nta', 'Nitab4.5_0009341g0010' => 'nta', 'Nitab4.5_0009535g0010' => 'nta', 'Nn1g03995' => 'nnu', 'Nn1g04100' => 'nnu', 'Nn1g06530' => 'nnu', 'Nn3g16404' => 'nnu', 'Nn3g17212' => 'nnu', 'Nn3g20776' => 'nnu', 'Nn3g21923' => 'nnu', 'Nn5g27737' => 'nnu', 'Nn5g29461' => 'nnu', 'Nn7g38355' => 'nnu', 'Nn8g39873' => 'nnu', 'Oeu000548.2' => 'oeu', 'Oeu004672.1' => 'oeu', 'Oeu015605.2' => 'oeu', 'Oeu016092.1' => 'oeu', 'Oeu017879.3' => 'oeu', 'Oeu024910.1' => 'oeu', 'Oeu028965.1' => 'oeu', 'Oeu031269.1' => 'oeu', 'Oeu031270.1' => 'oeu', 'Oeu032535.1' => 'oeu', 'Oeu034151.1' => 'oeu', 'Oeu034152.1' => 'oeu', 'Oeu034588.2' => 'oeu', 'Oeu050846.1' => 'oeu', 'Oeu050849.2' => 'oeu', 'Oeu051063.2' => 'oeu', 'Oeu052368.1' => 'oeu', 'Oeu052370.1' => 'oeu', 'Os01g0210400' => 'osa', 'Os01g0304300' => 'osa', 'Os01g0749100' => 'osa', 'Os02g0745800' => 'osa', 'Os03g0769050' => 'osa', 'Os05g0531500' => 'osa', 'Os06g0724300' => 'osa', 'Os11g0198100' => 'osa', 'Peaxi162Scf00069g01425' => 'pax', 'Peaxi162Scf00280g00811' => 'pax', 'Peaxi162Scf00310g00615' => 'pax', 'Peaxi162Scf00362g00542' => 'pax', 'Peaxi162Scf00461g00310' => 'pax', 'Peaxi162Scf00530g00118' => 'pax', 'Peaxi162Scf00541g00057' => 'pax', 'Peaxi162Scf00661g00017' => 'pax', 'Peaxi162Scf00926g00027' => 'pax', 'Peaxi162Scf01064g00263' => 'pax', 'Peaxi162Scf01211g00135' => 'pax', 'PGR004G2336' => 'pgr', 'PGR042G0327' => 'pgr', 'PGR042G1957' => 'pgr', 'PGR042G2003' => 'pgr', 'PGR042G3929' => 'pgr', 'PGR083G1137' => 'pgr', 'PGR083G1364' => 'pgr', 'PGSC0003DMG400003381' => 'stu', 'PGSC0003DMG400003417' => 'stu', 'PGSC0003DMG400008981' => 'stu', 'PGSC0003DMG400012417' => 'stu', 'PGSC0003DMG400012823' => 'stu', 'PGSC0003DMG400016885' => 'stu', 'PGSC0003DMG400022812' => 'stu', 'PGSC0003DMG400029726' => 'stu', 'PGSC0003DMG401009243' => 'stu', 'PGSC0003DMG401031505' => 'stu', 'PGSC0003DMG402031505' => 'stu', 'Phvul.001G017600' => 'pvu', 'Phvul.002G193500' => 'pvu', 'Phvul.002G228900' => 'pvu', 'Phvul.002G236800' => 'pvu', 'Phvul.003G049500' => 'pvu', 'Phvul.005G072000' => 'pvu', 'Phvul.006G164800' => 'pvu', 'Phvul.006G185100' => 'pvu', 'Phvul.007G090000' => 'pvu', 'Potri.001G399800' => 'ptr', 'Potri.002G149900' => 'ptr', 'Potri.004G044100' => 'ptr', 'Potri.004G177600' => 'ptr', 'Potri.009G138000' => 'ptr', 'Potri.010G094000' => 'ptr', 'Potri.011G053000' => 'ptr', 'Potri.011G119300' => 'ptr', 'Potri.013G113700' => 'ptr', 'Potri.018G107800' => 'ptr', 'Potri.019G084100' => 'ptr', 'Pp3c14_23720' => 'ppa', 'Pp3c16_6340' => 'ppa', 'Pp3c23_13420' => 'ppa', 'Pp3c24_2740' => 'ppa', 'Pp3c25_860' => 'ppa', 'Pp3c8_21750' => 'ppa', 'Prupe.1G273000' => 'ppe', 'Prupe.1G273700' => 'ppe', 'Prupe.1G274100' => 'ppe', 'Prupe.2G023300' => 'ppe', 'Prupe.4G048000' => 'ppe', 'Prupe.4G080400' => 'ppe', 'Prupe.4G181200' => 'ppe', 'Prupe.8G056900' => 'ppe', 'Prupe.8G168700' => 'ppe', 'Psat1g189080' => 'psa', 'Psat1g204760' => 'psa', 'Psat4g175560' => 'psa', 'Psat4g177720' => 'psa', 'Psat5g244240' => 'psa', 'Psat6g010720' => 'psa', 'Psat6g187200' => 'psa', 'Psat7g072040' => 'psa', 'PSO017G3501' => 'pso', 'PSO063G2148' => 'pso', 'PSO063G5608' => 'pso', 'PSO210G6392' => 'pso', 'PSO541G2319' => 'pso', 'PSO541G2836' => 'pso', 'PSO541G4012' => 'pso', 'PSO541G6253' => 'pso', 'PSO675G0580' => 'pso', 'PSO675G0856' => 'pso', 'PSO675G5635' => 'pso', 'PSO675G9157' => 'pso', 'PSO832G1660' => 'pso', 'PSO832G1969' => 'pso', 'QL02p007186' => 'qlo', 'QL02p033904' => 'qlo', 'QL03p064391' => 'qlo', 'QL05p040593' => 'qlo', 'QL05p058242' => 'qlo', 'QL08p021825' => 'qlo', 'QL11p004981' => 'qlo', 'RcHm_v2.0_Chr1g0318301' => 'rch', 'RcHm_v2.0_Chr4g0418501' => 'rch', 'RcHm_v2.0_Chr4g0439971' => 'rch', 'RcHm_v2.0_Chr5g0008541' => 'rch', 'RcHm_v2.0_Chr5g0014101' => 'rch', 'RcHm_v2.0_Chr5g0014131' => 'rch', 'RcHm_v2.0_Chr5g0033621' => 'rch', 'RcHm_v2.0_Chr6g0272041' => 'rch', 'RcHm_v2.0_Chr6g0278831' => 'rch', 'Rhsim02G0130400' => 'rsi', 'Rhsim02G0171100' => 'rsi', 'Rhsim05G0053000' => 'rsi', 'Rhsim05G0053100' => 'rsi', 'Rhsim06G0096500' => 'rsi', 'Rhsim06G0096600' => 'rsi', 'Rhsim06G0199100' => 'rsi', 'Rhsim12G0062300' => 'rsi', 'Rhsim12G0062800' => 'rsi', 'Sabra02G0118600' => 'sbr', 'Sabra04G0027300' => 'sbr', 'Sabra04G0119500' => 'sbr', 'Sabra08G0112500' => 'sbr', 'Sabra11G0036800' => 'sbr', 'Sabra11G0103800' => 'sbr', 'Sabra13G0096300' => 'sbr', 'Sabra16G0262300' => 'sbr', 'Sabra18G0091700' => 'sbr', 'Sabra19G0095400' => 'sbr', 'SalBow6G3080' => 'sbo', 'SalBow7G1157' => 'sbo', 'SalBow7G2123' => 'sbo', 'SalBow7G2285' => 'sbo', 'SalBow7G3537' => 'sbo', 'SalBow8G2947' => 'sbo', 'SalBow8G4463' => 'sbo', 'SalBow8G5466' => 'sbo', 'Sc01g0001750' => 'sci', 'Sc02g0006640' => 'sci', 'Sc02g0006670' => 'sci', 'Sc04g0008220' => 'sci', 'Sc05g0006190' => 'sci', 'Sc08g0002760' => 'sci', 'Sc17g0006170' => 'sci', 'Sc22g0002050' => 'sci', 'Sc23g0001190' => 'sci', 'Sc24g0000980' => 'sci', 'Sed0006245' => 'sed', 'Sed0007543' => 'sed', 'Sed0009411' => 'sed', 'Sed0010765' => 'sed', 'Sed0012944' => 'sed', 'Sed0014682' => 'sed', 'Sed0016174' => 'sed', 'Sed0016796' => 'sed', 'Sed0020317' => 'sed', 'Sed0021467' => 'sed', 'SEGI_01316' => 'sgi', 'SEGI_03374' => 'sgi', 'SEGI_16265' => 'sgi', 'SEGI_18569' => 'sgi', 'SEGI_20351' => 'sgi', 'SEGI_26395' => 'sgi', 'SEGI_29469' => 'sgi', 'SEGI_34771' => 'sgi', 'SEGI_36769' => 'sgi', 'SEGI_37139' => 'sgi', 'SGA_v2.0_scaffold100G29687' => 'sas', 'SGA_v2.0_scaffold118G32472' => 'sas', 'SGA_v2.0_scaffold14G07051' => 'sas', 'SGA_v2.0_scaffold183G39845' => 'sas', 'SGA_v2.0_scaffold1G00174' => 'sas', 'SGA_v2.0_scaffold22G09714' => 'sas', 'SGA_v2.0_scaffold333G48992' => 'sas', 'SGA_v2.0_scaffold46G17491' => 'sas', 'SGA_v2.0_scaffold49G18294' => 'sas', 'SGA_v2.0_scaffold63G21658' => 'sas', 'SHI01741' => 'shi', 'SHI05771' => 'shi', 'SHI18077' => 'shi', 'SHI20525' => 'shi', 'SHI20527' => 'shi', 'SHI20528' => 'shi', 'SMO172G0185' => 'smo', 'SMO198G0020' => 'smo', 'SMO351G0006' => 'smo', 'SMO356G0118' => 'smo', 'SMO358G0296' => 'smo', 'SMO367G0079' => 'smo', 'SMO367G1277' => 'smo', 'Solyc01g014220.3' => 'sly', 'Solyc01g111770.2' => 'sly', 'Solyc02g078180.3' => 'sly', 'Solyc03g006430.3' => 'sly', 'Solyc03g006456.1' => 'sly', 'Solyc03g079860.2' => 'sly', 'Solyc04g079770.3' => 'sly', 'Solyc05g007430.4' => 'sly', 'Solyc07g063150.3' => 'sly', 'Solyc08g016620.3' => 'sly', 'Solyc09g057590.3' => 'sly', 'Solyc09g057600.1' => 'sly', 'Solyc10g009050.3' => 'sly', 'Solyc11g017420.2' => 'sly', 'Sopen01g053810' => 'spe', 'Sopen02g023040' => 'spe', 'Sopen03g002440' => 'spe', 'Sopen04g033350' => 'spe', 'Sopen05g003310' => 'spe', 'Sopen07g004050' => 'spe', 'Sopen07g031340' => 'spe', 'Sopen08g006990' => 'spe', 'Sopen10g004830' => 'spe', 'Sopen11g009370' => 'spe', 'Sp1g24450' => 'spa', 'Sp1g29670' => 'spa', 'Sp1g39600' => 'spa', 'Sp2g11080' => 'spa', 'Sp2g13970' => 'spa', 'Sp4g16130' => 'spa', 'Sp6g13080' => 'spa', 'Sp7g37270' => 'spa', 'TAR371G0065' => 'tar', 'TAR376G0340' => 'tar', 'TAR376G0435' => 'tar', 'TAR381G0002' => 'tar', 'TAR381G1236' => 'tar', 'TAR624G0055' => 'tar', 'TAR624G0324' => 'tar', 'TAR624G0696' => 'tar', 'TAR624G0906' => 'tar', 'TAR625G0107' => 'tar', 'TAR626G0015' => 'tar', 'TAR626G1356' => 'tar', 'TAR627G0888' => 'tar', 'TAR628G0399' => 'tar', 'TAR628G1327' => 'tar', 'TAR629G2831' => 'tar', 'TAR629G2874' => 'tar', 'TAR633G1432' => 'tar', 'TAR633G2771' => 'tar', 'THA.LOC104803394' => 'tha', 'THA.LOC104805153' => 'tha', 'THA.LOC104806784' => 'tha', 'THA.LOC104810473' => 'tha', 'THA.LOC104813100' => 'tha', 'THA.LOC104814215' => 'tha', 'THA.LOC104815554' => 'tha', 'THA.LOC104820544' => 'tha', 'THA.LOC104824754' => 'tha', 'THA.LOC104827717' => 'tha', 'Thecc.02G031400' => 'tca', 'Thecc.02G055900' => 'tca', 'Thecc.02G350800' => 'tca', 'Thecc.06G150900' => 'tca', 'Thecc.06G186600' => 'tca', 'Thecc.07G089600' => 'tca', 'Thecc.08G020400' => 'tca', 'Thecc.08G182100' => 'tca', 'Thhalv10000873m.g' => 'esa', 'Thhalv10004185m.g' => 'esa', 'Thhalv10006981m.g' => 'esa', 'Thhalv10007204m.g' => 'esa', 'Thhalv10011374m.g' => 'esa', 'Thhalv10013482m.g' => 'esa', 'Thhalv10017801m.g' => 'esa', 'Thhalv10024983m.g' => 'esa', 'TPR.G12072' => 'tpr', 'TPR.G15769' => 'tpr', 'TPR.G16504' => 'tpr', 'TPR.G16506' => 'tpr', 'TPR.G24345' => 'tpr', 'TPR.G26666' => 'tpr', 'TPR.G27320' => 'tpr', 'TPR.G31819' => 'tpr', 'TPR.G38879' => 'tpr', 'TPR.G39015' => 'tpr', 'TPR.G8819' => 'tpr', 'TWI09G0924' => 'twi', 'TWI12G0811' => 'twi', 'TWI12G1294' => 'twi', 'TWI31G0150' => 'twi', 'TWI36G1262' => 'twi', 'TWI38G1287' => 'twi', 'TWI38G1633' => 'twi', 'TWI38G1982' => 'twi', 'TWI39G0116' => 'twi', 'TWI60G1011' => 'twi', 'TWI63G0171' => 'twi', 'TWI73G0839' => 'twi', 'TWI79G1511' => 'twi', 'unitig_0.g915' => 'ugi', 'unitig_0.g916' => 'ugi', 'unitig_21.g20219' => 'ugi', 'unitig_21.g20416' => 'ugi', 'unitig_578.g16132' => 'ugi', 'unitig_578.g16718' => 'ugi', 'unitig_62.g23481' => 'ugi', 'unitig_744.g24535' => 'ugi', 'unitig_749.g13525' => 'ugi', 'vmacro01248' => 'vma', 'vmacro02290' => 'vma', 'vmacro10946' => 'vma', 'vmacro11865' => 'vma', 'vmacro12493' => 'vma', 'vmacro17322' => 'vma', 'vmacro21599' => 'vma', 'vmacro23041' => 'vma', 'VMungo0251G0004' => 'vmu', 'VMungo0251G2639' => 'vmu', 'VMungo0251G2967' => 'vmu', 'VMungo0540G0864' => 'vmu', 'VMungo0540G1569' => 'vmu', 'VMungo0647G0317' => 'vmu', 'VMungo0720G1373' => 'vmu', 'VMungo0720G1508' => 'vmu', 'VMungo1080G0485' => 'vmu', 'VMungo1215G3177' => 'vmu', 'Zm00001eb112600' => 'zma', 'Zm00001eb120220' => 'zma', 'Zm00001eb153240' => 'zma', 'Zm00001eb168880' => 'zma', 'Zm00001eb213920' => 'zma', 'Zm00001eb228280' => 'zma', 'Zm00001eb254580' => 'zma', 'Zm00001eb272180' => 'zma', 'Zm00001eb293190' => 'zma', 'Zm00001eb322930' => 'zma', 'Zm00001eb353360' => 'zma', 'Zm00001eb353390' => 'zma', 'Zm00001eb353430' => 'zma', 'Zm00001eb353440' => 'zma', 'Zm00001eb353780' => 'zma' ), 'gf_id' => 'HOM05D000499', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000499' ), 'data_identifier' => 'HOM05D000499', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000499', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1066', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p29780' => 'bna', 'A02p33180' => 'bna', 'A03p16470' => 'bna', 'A03p66010' => 'bna', 'A04p25970' => 'bna', 'A06p01270' => 'bna', 'A06p46080' => 'bna', 'A07p11400' => 'bna', 'A08p01840' => 'bna', 'A08p08230' => 'bna', 'A08p25740' => 'bna', 'A09p32070' => 'bna', 'A09p37830' => 'bna', 'A09p42840' => 'bna', 'A09p42850' => 'bna', 'Aa31LG10G2060' => 'aar', 'Aa31LG2G7410' => 'aar', 'Aa31LG6G10200' => 'aar', 'Aa31LG6G16680' => 'aar', 'Aa31LG6G8470' => 'aar', 'Aa31LG9G12730' => 'aar', 'Aa31LG9G13680' => 'aar', 'Aa31LG9G14920' => 'aar', 'Aa31LG9G6650' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4977' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5467' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3254' => 'aag', 'Actinidia02578' => 'ach', 'Actinidia07693' => 'ach', 'Actinidia08413' => 'ach', 'Actinidia08414' => 'ach', 'Actinidia15289' => 'ach', 'Actinidia19871' => 'ach', 'Actinidia21475' => 'ach', 'Actinidia22576' => 'ach', 'Actinidia28327' => 'ach', 'Actinidia32491' => 'ach', 'Actinidia39463' => 'ach', 'Actinidia39571' => 'ach', 'Ah.01g013750' => 'amhyb', 'Ah.01g023210' => 'amhyb', 'Ah.04g164850' => 'amhyb', 'Ah.05g178060' => 'amhyb', 'Ah.07g204270' => 'amhyb', 'Ah.07g208480' => 'amhyb', 'Ah.09g237410' => 'amhyb', 'Ah.14g089460' => 'amhyb', 'AL1G41790' => 'aly', 'AL1G49050' => 'aly', 'AL1G53810' => 'aly', 'AL1G61400' => 'aly', 'AL4G18580' => 'aly', 'AL5G12510' => 'aly', 'AL5G12540' => 'aly', 'AL6G43230' => 'aly', 'AL7G10370' => 'aly', 'AL7G19250' => 'aly', 'AL8G12240' => 'aly', 'AL8G18540' => 'aly', 'Aqoxy1G02409' => 'aox', 'Aqoxy2G03993' => 'aox', 'Aqoxy3G03357' => 'aox', 'Aqoxy4G00785' => 'aox', 'Aqoxy5G02598' => 'aox', 'Aqoxy6G00132' => 'aox', 'Aqoxy7G01776' => 'aox', 'Aqoxy7G02316' => 'aox', 'Aqoxy7G03973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.12AFKW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B8730' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27IQR1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3F75VG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3RE0GA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41TCQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.527VTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FIR39' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5W8UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DA38EV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ63HS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H1I32C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HC27T5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4M8AP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7N3CZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9UVDZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LS1NQA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT1D4B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SKC4TM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCFV76' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF9Q1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQWD9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1ZM88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WE07RT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YCK7VH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJE6Q6' => 'arhy', 'AT1G28240' => 'ath', 'AT1G34550' => 'ath', 'AT1G53040' => 'ath', 'AT2G02910' => 'ath', 'AT4G09630' => 'ath', 'AT4G38500' => 'ath', 'AT5G42660' => 'ath', 'AT5G46220' => 'ath', 'ATR0152G026' => 'atr', 'ATR0564G343' => 'atr', 'ATR0706G151' => 'atr', 'ATR0733G207' => 'atr', 'ATR0751G234' => 'atr', 'ATR0807G048' => 'atr', 'ATR1091G084' => 'atr', 'Atru.chr10.1229' => 'acertr', 'Atru.chr10.1230' => 'acertr', 'Atru.chr10.1874' => 'acertr', 'Atru.chr11.1808' => 'acertr', 'Atru.chr13.1795' => 'acertr', 'Atru.chr13.570' => 'acertr', 'Atru.chr2.2608' => 'acertr', 'Atru.chr2.2609' => 'acertr', 'Atru.chr5.3428' => 'acertr', 'Atru.chr8.1171' => 'acertr', 'AUR62004651' => 'cqu', 'AUR62008675' => 'cqu', 'AUR62010014' => 'cqu', 'AUR62013004' => 'cqu', 'AUR62014825' => 'cqu', 'AUR62015015' => 'cqu', 'AUR62015151' => 'cqu', 'AUR62017020' => 'cqu', 'AUR62019422' => 'cqu', 'AUR62023570' => 'cqu', 'AUR62025571' => 'cqu', 'AUR62029098' => 'cqu', 'AUR62033863' => 'cqu', 'AUR62034296' => 'cqu', 'AUR62040075' => 'cqu', 'BcaB02g07334' => 'bca', 'BcaB02g10575' => 'bca', 'BcaB03g12119' => 'bca', 'BcaB03g12120' => 'bca', 'BcaB03g13945' => 'bca', 'BcaB04g17123' => 'bca', 'BcaB04g17867' => 'bca', 'BcaB04g19839' => 'bca', 'BcaB07g30317' => 'bca', 'BcaB07g32432' => 'bca', 'BcaB07g33362' => 'bca', 'BcaB08g36611' => 'bca', 'BcaC01g00028' => 'bca', 'BcaC01g01356' => 'bca', 'BcaC01g02034' => 'bca', 'BcaC01g06051' => 'bca', 'BcaC03g16839' => 'bca', 'BcaC03g17176' => 'bca', 'BcaC05g26829' => 'bca', 'BcaC06g31490' => 'bca', 'BcaC06g35344' => 'bca', 'BcaC06g36570' => 'bca', 'BcaC07g37537' => 'bca', 'BcaC08g43491' => 'bca', 'BcaC08g43773' => 'bca', 'BcaNung00234' => 'bca', 'BcaNung01982' => 'bca', 'BcaNung03707' => 'bca', 'BcaNung06454' => 'bca', 'BolC2t10762H' => 'bol', 'BolC2t11191H' => 'bol', 'BolC3t14322H' => 'bol', 'BolC3t19747H' => 'bol', 'BolC3t21425H' => 'bol', 'BolC4t27800H' => 'bol', 'BolC5t31423H' => 'bol', 'BolC6t35951H' => 'bol', 'BolC6t36282H' => 'bol', 'BolC7t40678H' => 'bol', 'BolC7t40679H' => 'bol', 'BolC7t42222H' => 'bol', 'BolC7t43492H' => 'bol', 'BolC7t46785H' => 'bol', 'BolC8t47853H' => 'bol', 'BolC9t56805H' => 'bol', 'BraA02t08000Z' => 'bra', 'BraA02t08341Z' => 'bra', 'BraA03t10936Z' => 'bra', 'BraA03t15657Z' => 'bra', 'BraA04t18100Z' => 'bra', 'BraA05t20523Z' => 'bra', 'BraA06t23353Z' => 'bra', 'BraA06t27473Z' => 'bra', 'BraA06t27769Z' => 'bra', 'BraA07t28928Z' => 'bra', 'BraA08t32236Z' => 'bra', 'BraA08t32841Z' => 'bra', 'BraA08t34524Z' => 'bra', 'BraA09t38742Z' => 'bra', 'BraA09t39295Z' => 'bra', 'C02p47180' => 'bna', 'C02p50990' => 'bna', 'C03p19360' => 'bna', 'C03p74950' => 'bna', 'C03p91000' => 'bna', 'C04p63260' => 'bna', 'C05p27050' => 'bna', 'C06p08750' => 'bna', 'C06p11490' => 'bna', 'C07p02820' => 'bna', 'C07p17180' => 'bna', 'C07p29440' => 'bna', 'C07p63730' => 'bna', 'C09p39260' => 'bna', 'CAN.G1164.34' => 'can', 'CAN.G1164.39' => 'can', 'CAN.G1530.3' => 'can', 'CAN.G162.61' => 'can', 'CAN.G176.6' => 'can', 'CAN.G289.49' => 'can', 'CAN.G370.21' => 'can', 'CAN.G370.22' => 'can', 'CAN.G371.117' => 'can', 'CAN.G58.37' => 'can', 'CAN.G588.98' => 'can', 'CANSAT21G2266' => 'cansat', 'CANSAT25G2799' => 'cansat', 'CANSAT35G0862' => 'cansat', 'CANSAT35G1704' => 'cansat', 'CANSAT35G1760' => 'cansat', 'CANSAT56G3971' => 'cansat', 'CANSAT56G4116' => 'cansat', 'CANSAT80G1259' => 'cansat', 'CARHR027730' => 'chi', 'CARHR033880' => 'chi', 'CARHR043270' => 'chi', 'CARHR145330' => 'chi', 'CARHR145340' => 'chi', 'CARHR175570' => 'chi', 'CARHR181570' => 'chi', 'CARHR258470' => 'chi', 'CARHR260490' => 'chi', 'CARHR294220' => 'chi', 'Carub.0001s2668' => 'cru', 'Carub.0001s3257' => 'cru', 'Carub.0001s4220' => 'cru', 'Carub.0005s0179' => 'cru', 'Carub.0006s2807' => 'cru', 'Carub.0007s0039' => 'cru', 'Carub.0008s0169' => 'cru', 'Carub.0008s0636' => 'cru', 'Ca_00338_v3' => 'car', 'Ca_00542_v3' => 'car', 'Ca_01844_v3' => 'car', 'Ca_10611_v3' => 'car', 'Ca_13326_v3' => 'car', 'Ca_17944_v3' => 'car', 'Ca_18546_v3' => 'car', 'Ca_24219_v3' => 'car', 'Ca_29972_v3' => 'car', 'CBR_g3681' => 'cbr', 'CBR_g40021' => 'cbr', 'Cc01_g08140' => 'ccan', 'Cc02_g13410' => 'ccan', 'Cc02_g37480' => 'ccan', 'Cc05_g12030' => 'ccan', 'Cc09_g03370' => 'ccan', 'Cc09_g10300' => 'ccan', 'Cc10_g03530' => 'ccan', 'Cc10_g11380' => 'ccan', 'CDE01G0176' => 'cde', 'CDE02G0675' => 'cde', 'CDE02G0942' => 'cde', 'CDE02G1153' => 'cde', 'CDE02G4177' => 'cde', 'CDE04G2117' => 'cde', 'CDE04G2736' => 'cde', 'CDE08G1161' => 'cde', 'CDE09G1238' => 'cde', 'Cfa000467' => 'cfa', 'Cfa000947' => 'cfa', 'Cfa004969' => 'cfa', 'Cfa005284' => 'cfa', 'Cfa008993' => 'cfa', 'Cfa018187' => 'cfa', 'Cfa018454' => 'cfa', 'Cfa020585' => 'cfa', 'Ciclev10000424m.g' => 'ccl', 'Ciclev10003605m.g' => 'ccl', 'Ciclev10007828m.g' => 'ccl', 'Ciclev10014620m.g' => 'ccl', 'Ciclev10015169m.g' => 'ccl', 'Ciclev10018291m.g' => 'ccl', 'Ciclev10028256m.g' => 'ccl', 'Ciclev10033822m.g' => 'ccl', 'CiPaw.05G060300' => 'cil', 'CiPaw.05G085000' => 'cil', 'CiPaw.06G083700' => 'cil', 'CiPaw.06G120300' => 'cil', 'CiPaw.09G060500' => 'cil', 'CiPaw.09G123800' => 'cil', 'CiPaw.11G169700' => 'cil', 'CiPaw.12G118300' => 'cil', 'CiPaw.15G071000' => 'cil', 'CiPaw.15G081900' => 'cil', 'ClCG01G024610' => 'cla', 'ClCG03G006070' => 'cla', 'ClCG05G019250' => 'cla', 'ClCG09G009500' => 'cla', 'ClCG11G008200' => 'cla', 'ClCG11G018080' => 'cla', 'COL.COLO4_17373' => 'col', 'COL.COLO4_22994' => 'col', 'COL.COLO4_26389' => 'col', 'COL.COLO4_27170' => 'col', 'COL.COLO4_31074' => 'col', 'COL.COLO4_31465' => 'col', 'COL.COLO4_36438' => 'col', 'COL.COLO4_36439' => 'col', 'Cpa.g.c38781' => 'cpa', 'Cpa.g.sc128.12' => 'cpa', 'Cpa.g.sc166.7' => 'cpa', 'Cpa.g.sc166.8' => 'cpa', 'Cpa.g.sc20.111' => 'cpa', 'Cpa.g.sc27.31' => 'cpa', 'Cpa.g.sc64.36' => 'cpa', 'Cpa.g.sc64.37' => 'cpa', 'Cpa.g.sc66.49' => 'cpa', 'Cpa.g.sc80.64' => 'cpa', 'CsaV3_1G012320' => 'csa', 'CsaV3_2G008480' => 'csa', 'CsaV3_2G033450' => 'csa', 'CsaV3_3G044830' => 'csa', 'CsaV3_4G033710' => 'csa', 'CsaV3_6G051730' => 'csa', 'CsaV3_7G025350' => 'csa', 'CSS0001067' => 'camsi', 'CSS0005996' => 'camsi', 'CSS0006590' => 'camsi', 'CSS0009673' => 'camsi', 'CSS0010201' => 'camsi', 'CSS0010549' => 'camsi', 'CSS0011364' => 'camsi', 'CSS0014473' => 'camsi', 'CSS0014961' => 'camsi', 'CSS0020191' => 'camsi', 'CSS0021165' => 'camsi', 'CSS0022306' => 'camsi', 'CSS0030591' => 'camsi', 'CSS0030696' => 'camsi', 'CSS0032653' => 'camsi', 'CSS0037487' => 'camsi', 'CSS0041102' => 'camsi', 'CSS0041261' => 'camsi', 'CSS0046246' => 'camsi', 'CSS0049256' => 'camsi', 'DCAR_004075' => 'dca', 'DCAR_011538' => 'dca', 'DCAR_019553' => 'dca', 'DCAR_020952' => 'dca', 'DCAR_021739' => 'dca', 'DCAR_027407' => 'dca', 'DCAR_027913' => 'dca', 'DCAR_028066' => 'dca', 'Dinv05899' => 'din', 'Dinv07563' => 'din', 'Dinv08010' => 'din', 'Dinv14125' => 'din', 'Dinv20172' => 'din', 'Dinv30743' => 'din', 'Dinv31229' => 'din', 'Dinv34162' => 'din', 'Dinv36028' => 'din', 'Dinv39368' => 'din', 'Dinv40565' => 'din', 'Dinv41706' => 'din', 'Duzib052G0089' => 'dzi', 'Duzib116G0641' => 'dzi', 'Duzib132G0069' => 'dzi', 'Duzib132G1219' => 'dzi', 'Duzib147G0278' => 'dzi', 'Duzib160G0480' => 'dzi', 'Duzib170G0661' => 'dzi', 'Duzib177G0591' => 'dzi', 'Duzib187G1353' => 'dzi', 'Duzib192G0858' => 'dzi', 'Duzib192G0883' => 'dzi', 'Duzib213G0506' => 'dzi', 'Duzib235G0289' => 'dzi', 'Duzib251G0422' => 'dzi', 'ECA232G3898' => 'eca', 'ECA233G5950' => 'eca', 'ECA234G1699' => 'eca', 'ECA234G2421' => 'eca', 'ECA236G0426' => 'eca', 'ECA236G4331' => 'eca', 'ECA248G2573' => 'eca', 'EL10Ac1g00077' => 'bvu', 'EL10Ac1g01746' => 'bvu', 'EL10Ac2g03464' => 'bvu', 'EL10Ac4g08176' => 'bvu', 'EL10Ac7g17521' => 'bvu', 'EL10Ac8g20386' => 'bvu', 'EL10Ac9g21343' => 'bvu', 'EL10Ac9g22688' => 'bvu', 'Eucgr.B03434' => 'egr', 'Eucgr.D00618' => 'egr', 'Eucgr.E02395' => 'egr', 'Eucgr.F01129' => 'egr', 'Eucgr.F02622' => 'egr', 'Eucgr.F04207' => 'egr', 'FAN01G0570' => 'fan', 'FAN03G3351' => 'fan', 'FAN06G3702' => 'fan', 'FAN07G2149' => 'fan', 'FAN10G3758' => 'fan', 'FAN11G1170' => 'fan', 'FAN11G2050' => 'fan', 'FAN11G2724' => 'fan', 'FAN12G1700' => 'fan', 'FAN12G2028' => 'fan', 'FAN15G1160' => 'fan', 'FAN15G3063' => 'fan', 'FAN16G2540' => 'fan', 'FAN16G3077' => 'fan', 'FAN16G3624' => 'fan', 'FAN17G0221' => 'fan', 'FAN20G2492' => 'fan', 'FAN20G2905' => 'fan', 'FAN21G0548' => 'fan', 'FAN21G1300' => 'fan', 'FAN22G0077' => 'fan', 'FAN22G1315' => 'fan', 'FAN24G1280' => 'fan', 'FAN24G1445' => 'fan', 'FAN24G3527' => 'fan', 'FAN25G0464' => 'fan', 'FAN25G2885' => 'fan', 'FAN25G3270' => 'fan', 'FAN27G1101' => 'fan', 'FAN27G2846' => 'fan', 'FAN27G3524' => 'fan', 'FvH4_2g11770' => 'fve', 'FvH4_2g15630' => 'fve', 'FvH4_3g05570' => 'fve', 'FvH4_3g09110' => 'fve', 'FvH4_3g19940' => 'fve', 'FvH4_4g04821' => 'fve', 'FvH4_4g31480' => 'fve', 'FvH4_7g01740' => 'fve', 'Glyma.05G130400' => 'gma', 'Glyma.05G156400' => 'gma', 'Glyma.07G197000' => 'gma', 'Glyma.08G085151' => 'gma', 'Glyma.08G114500' => 'gma', 'Glyma.08G300400' => 'gma', 'Glyma.10G215800' => 'gma', 'Glyma.12G224400' => 'gma', 'Glyma.13G179300' => 'gma', 'Glyma.13G218151' => 'gma', 'Glyma.13G238800' => 'gma', 'Glyma.13G276900' => 'gma', 'Glyma.14G078200' => 'gma', 'Glyma.15G074500' => 'gma', 'Glyma.15G094100' => 'gma', 'Glyma.17G247200' => 'gma', 'Glyma.18G120100' => 'gma', 'Glyma.20G176000' => 'gma', 'Gohir.A01G063600' => 'ghi', 'Gohir.A01G170301' => 'ghi', 'Gohir.A02G060500' => 'ghi', 'Gohir.A05G133850' => 'ghi', 'Gohir.A05G161400' => 'ghi', 'Gohir.A06G012900' => 'ghi', 'Gohir.A06G035901' => 'ghi', 'Gohir.A06G127100' => 'ghi', 'Gohir.A06G210500' => 'ghi', 'Gohir.A08G008650' => 'ghi', 'Gohir.A09G072700' => 'ghi', 'Gohir.A09G088301' => 'ghi', 'Gohir.A10G040600' => 'ghi', 'Gohir.A12G036300' => 'ghi', 'Gohir.A12G143350' => 'ghi', 'Gohir.A12G165500' => 'ghi', 'Gohir.A13G145700' => 'ghi', 'Gohir.D01G050000' => 'ghi', 'Gohir.D01G051366' => 'ghi', 'Gohir.D01G161350' => 'ghi', 'Gohir.D02G065900' => 'ghi', 'Gohir.D05G164200' => 'ghi', 'Gohir.D05G355500' => 'ghi', 'Gohir.D06G010400' => 'ghi', 'Gohir.D06G111250' => 'ghi', 'Gohir.D06G132000' => 'ghi', 'Gohir.D06G210500' => 'ghi', 'Gohir.D07G165675' => 'ghi', 'Gohir.D08G062240' => 'ghi', 'Gohir.D08G086101' => 'ghi', 'Gohir.D08G138060' => 'ghi', 'Gohir.D09G072300' => 'ghi', 'Gohir.D10G041400' => 'ghi', 'Gohir.D11G191020' => 'ghi', 'Gohir.D11G212066' => 'ghi', 'Gohir.D12G036300' => 'ghi', 'Gohir.D12G168600' => 'ghi', 'Gohir.D13G150600' => 'ghi', 'Gorai.001G057300' => 'gra', 'Gorai.002G069900' => 'gra', 'Gorai.002G200000' => 'gra', 'Gorai.003G067600' => 'gra', 'Gorai.005G074800' => 'gra', 'Gorai.006G087300' => 'gra', 'Gorai.008G037500' => 'gra', 'Gorai.008G181400' => 'gra', 'Gorai.009G169400' => 'gra', 'Gorai.009G387900' => 'gra', 'Gorai.010G013300' => 'gra', 'Gorai.010G153800' => 'gra', 'Gorai.010G255800' => 'gra', 'Gorai.011G043700' => 'gra', 'Gorai.011G198900' => 'gra', 'Gorai.013G168400' => 'gra', 'GSVIVG01005212001' => 'vvi', 'GSVIVG01006163001' => 'vvi', 'GSVIVG01009625001' => 'vvi', 'GSVIVG01014338001' => 'vvi', 'GSVIVG01020005001' => 'vvi', 'GSVIVG01021450001' => 'vvi', 'GSVIVG01023975001' => 'vvi', 'GSVIVG01034490001' => 'vvi', 'HanXRQChr04g0112071' => 'han', 'HanXRQChr05g0131151' => 'han', 'HanXRQChr09g0262371' => 'han', 'HanXRQChr09g0268401' => 'han', 'HanXRQChr10g0279241' => 'han', 'HanXRQChr10g0297961' => 'han', 'HanXRQChr11g0326231' => 'han', 'HanXRQChr11g0328471' => 'han', 'HanXRQChr16g0507941' => 'han', 'HanXRQChr17g0560211' => 'han', 'Haze_02108' => 'cav', 'Haze_02428' => 'cav', 'Haze_05593' => 'cav', 'Haze_06448' => 'cav', 'Haze_09427' => 'cav', 'Haze_12022' => 'cav', 'Haze_17612' => 'cav', 'Haze_17928' => 'cav', 'Hma1.2p1_0032F.1_g019250' => 'hma', 'Hma1.2p1_0163F.1_g072690' => 'hma', 'Hma1.2p1_0265F.1_g106710' => 'hma', 'Hma1.2p1_0286F.1_g113970' => 'hma', 'Hma1.2p1_0363F.1_g136640' => 'hma', 'Hma1.2p1_0584F.1_g183470' => 'hma', 'Hma1.2p1_0885F.1_g232570' => 'hma', 'HPP92_006022' => 'vpl', 'HPP92_007320' => 'vpl', 'HPP92_011521' => 'vpl', 'HPP92_019387' => 'vpl', 'HPP92_024038' => 'vpl', 'Hund05891' => 'sun', 'Hund06450' => 'sun', 'Hund12053' => 'sun', 'Hund16800' => 'sun', 'Hund21222' => 'sun', 'Hund22896' => 'sun', 'Hund23746' => 'sun', 'Hund27083' => 'sun', 'Lalb_Chr02g0141831' => 'lal', 'Lalb_Chr02g0141841' => 'lal', 'Lalb_Chr05g0220411' => 'lal', 'Lalb_Chr06g0162081' => 'lal', 'Lalb_Chr09g0327651' => 'lal', 'Lalb_Chr13g0295051' => 'lal', 'Lalb_Chr15g0086801' => 'lal', 'Lalb_Chr16g0383781' => 'lal', 'Lalb_Chr16g0383791' => 'lal', 'Lalb_Chr18g0055441' => 'lal', 'Lalb_Chr18g0059611' => 'lal', 'Lalb_Chr20g0109661' => 'lal', 'Lalb_Chr20g0109831' => 'lal', 'Lalb_Chr20g0121871' => 'lal', 'Lalb_Chr22g0355361' => 'lal', 'Lalb_Chr25g0286371' => 'lal', 'Lj1A1187G43' => 'lonja', 'Lj1A1205T50' => 'lonja', 'Lj1A800G33' => 'lonja', 'Lj1C1187T7' => 'lonja', 'Lj1C843T11' => 'lonja', 'Lj1g0010940' => 'lja', 'Lj2A288T69' => 'lonja', 'Lj3g0024276' => 'lja', 'Lj4A47T76' => 'lonja', 'Lj4g0005805' => 'lja', 'Lj4g0006097' => 'lja', 'Lj4g0008528' => 'lja', 'Lj4g0024907' => 'lja', 'Lj5g0012472' => 'lja', 'Lj5g0018648' => 'lja', 'Lj6C789G1' => 'lonja', 'Lj6g0004000' => 'lja', 'Lj7A292G67' => 'lonja', 'Lj7A292T64' => 'lonja', 'Lj9A400T58' => 'lonja', 'Lsat_1_v5_gn_1_126181' => 'lsa', 'Lsat_1_v5_gn_4_123041' => 'lsa', 'Lsat_1_v5_gn_4_133620' => 'lsa', 'Lsat_1_v5_gn_4_53221' => 'lsa', 'Lsat_1_v5_gn_4_71961' => 'lsa', 'Lsat_1_v5_gn_7_105241' => 'lsa', 'Lsat_1_v5_gn_7_21361' => 'lsa', 'Lsat_1_v5_gn_7_28860' => 'lsa', 'Lsat_1_v5_gn_7_31260' => 'lsa', 'Lsat_1_v5_gn_8_52801' => 'lsa', 'Manes.02G191400' => 'mes', 'Manes.03G110100' => 'mes', 'Manes.04G071100' => 'mes', 'Manes.05G100500' => 'mes', 'Manes.05G164700' => 'mes', 'Manes.15G087000' => 'mes', 'Manes.15G121500' => 'mes', 'Manes.16G028300' => 'mes', 'Manes.17G046100' => 'mes', 'Manes.17G069800' => 'mes', 'Manes.18G100500' => 'mes', 'Mapoly0002s0109' => 'mpo', 'Mapoly0024s0007' => 'mpo', 'Mapoly0089s0032' => 'mpo', 'MBI04_g42241_MAGBIO' => 'mbi', 'MBI05_g11988_MAGBIO' => 'mbi', 'MBI05_g35452_MAGBIO' => 'mbi', 'MBI07_g30179_MAGBIO' => 'mbi', 'MBI07_g35859_MAGBIO' => 'mbi', 'MBI07_g35860_MAGBIO' => 'mbi', 'MBI07_g37166_MAGBIO' => 'mbi', 'MBI08_g18172_MAGBIO' => 'mbi', 'MBI09_g08441_MAGBIO' => 'mbi', 'MBI13_g01676_MAGBIO' => 'mbi', 'MBI14_g42955_MAGBIO' => 'mbi', 'MBI16_g13161_MAGBIO' => 'mbi', 'MBI17_g27204_MAGBIO' => 'mbi', 'MBI19_g21595_MAGBIO' => 'mbi', 'MD00G1148400' => 'mdo', 'MD02G1301200' => 'mdo', 'MD03G1227800' => 'mdo', 'MD05G1041100' => 'mdo', 'MD05G1124800' => 'mdo', 'MD05G1284000' => 'mdo', 'MD05G1338800' => 'mdo', 'MD05G1338900' => 'mdo', 'MD07G1022800' => 'mdo', 'MD10G1047500' => 'mdo', 'MD10G1127500' => 'mdo', 'MD10G1262300' => 'mdo', 'MD10G1293800' => 'mdo', 'MD16G1074300' => 'mdo', 'Medtr1g021670' => 'mtr', 'Medtr1g096320' => 'mtr', 'Medtr2g013690' => 'mtr', 'Medtr2g019450' => 'mtr', 'Medtr2g085170' => 'mtr', 'Medtr4g088785' => 'mtr', 'Medtr8g055930' => 'mtr', 'Medtr8g085850' => 'mtr', 'MELO3C002605.2' => 'cme', 'MELO3C003891.2' => 'cme', 'MELO3C004012.2' => 'cme', 'MELO3C007134.2' => 'cme', 'MELO3C008118.2' => 'cme', 'MELO3C016700.2' => 'cme', 'MELO3C024127.2' => 'cme', 'MELO3C033361.2' => 'cme', 'MELO3C033362.2' => 'cme', 'Migut.C00430' => 'egut', 'Migut.C01246' => 'egut', 'Migut.E00101' => 'egut', 'Migut.H01486' => 'egut', 'Migut.H01939' => 'egut', 'Migut.K00360' => 'egut', 'Migut.M00910' => 'egut', 'Migut.M01139' => 'egut', 'Migut.N02677' => 'egut', 'MSTRG.13252' => 'ama', 'MSTRG.14701' => 'ama', 'MSTRG.1521' => 'ama', 'MSTRG.15884' => 'ama', 'MSTRG.16242' => 'ama', 'MSTRG.22285' => 'ama', 'MSTRG.22444' => 'ama', 'MSTRG.2349' => 'ama', 'MSTRG.26308' => 'ama', 'MSTRG.28296' => 'ama', 'MSTRG.9895' => 'ama', 'Nitab4.5_0000110g0060' => 'nta', 'Nitab4.5_0000420g0130' => 'nta', 'Nitab4.5_0000422g0030' => 'nta', 'Nitab4.5_0000560g0180' => 'nta', 'Nitab4.5_0000703g0100' => 'nta', 'Nitab4.5_0000786g0200' => 'nta', 'Nitab4.5_0001336g0020' => 'nta', 'Nitab4.5_0001796g0030' => 'nta', 'Nitab4.5_0003348g0060' => 'nta', 'Nitab4.5_0003698g0040' => 'nta', 'Nitab4.5_0003942g0090' => 'nta', 'Nitab4.5_0004775g0070' => 'nta', 'Nitab4.5_0004864g0030' => 'nta', 'Nitab4.5_0005615g0020' => 'nta', 'Nitab4.5_0009288g0030' => 'nta', 'Nitab4.5_0009341g0010' => 'nta', 'Nitab4.5_0009535g0010' => 'nta', 'Nn1g03995' => 'nnu', 'Nn1g04100' => 'nnu', 'Nn1g06530' => 'nnu', 'Nn3g16404' => 'nnu', 'Nn3g17212' => 'nnu', 'Nn3g20776' => 'nnu', 'Nn3g21923' => 'nnu', 'Nn5g27737' => 'nnu', 'Nn5g29461' => 'nnu', 'Nn7g38355' => 'nnu', 'Nn8g39873' => 'nnu', 'Oeu000548.2' => 'oeu', 'Oeu004672.1' => 'oeu', 'Oeu015605.2' => 'oeu', 'Oeu016092.1' => 'oeu', 'Oeu017879.3' => 'oeu', 'Oeu024910.1' => 'oeu', 'Oeu028965.1' => 'oeu', 'Oeu031269.1' => 'oeu', 'Oeu031270.1' => 'oeu', 'Oeu032535.1' => 'oeu', 'Oeu034151.1' => 'oeu', 'Oeu034152.1' => 'oeu', 'Oeu034588.2' => 'oeu', 'Oeu050846.1' => 'oeu', 'Oeu050849.2' => 'oeu', 'Oeu051063.2' => 'oeu', 'Oeu052368.1' => 'oeu', 'Oeu052370.1' => 'oeu', 'Os01g0210400' => 'osa', 'Os01g0304300' => 'osa', 'Os01g0749100' => 'osa', 'Os02g0745800' => 'osa', 'Os03g0769050' => 'osa', 'Os05g0531500' => 'osa', 'Os06g0724300' => 'osa', 'Os11g0198100' => 'osa', 'Peaxi162Scf00069g01425' => 'pax', 'Peaxi162Scf00280g00811' => 'pax', 'Peaxi162Scf00310g00615' => 'pax', 'Peaxi162Scf00362g00542' => 'pax', 'Peaxi162Scf00461g00310' => 'pax', 'Peaxi162Scf00530g00118' => 'pax', 'Peaxi162Scf00541g00057' => 'pax', 'Peaxi162Scf00661g00017' => 'pax', 'Peaxi162Scf00926g00027' => 'pax', 'Peaxi162Scf01064g00263' => 'pax', 'Peaxi162Scf01211g00135' => 'pax', 'PGR004G2336' => 'pgr', 'PGR042G0327' => 'pgr', 'PGR042G1957' => 'pgr', 'PGR042G2003' => 'pgr', 'PGR042G3929' => 'pgr', 'PGR083G1137' => 'pgr', 'PGR083G1364' => 'pgr', 'PGSC0003DMG400003381' => 'stu', 'PGSC0003DMG400003417' => 'stu', 'PGSC0003DMG400008981' => 'stu', 'PGSC0003DMG400012417' => 'stu', 'PGSC0003DMG400012823' => 'stu', 'PGSC0003DMG400016885' => 'stu', 'PGSC0003DMG400022812' => 'stu', 'PGSC0003DMG400029726' => 'stu', 'PGSC0003DMG401009243' => 'stu', 'PGSC0003DMG401031505' => 'stu', 'PGSC0003DMG402031505' => 'stu', 'Phvul.001G017600' => 'pvu', 'Phvul.002G193500' => 'pvu', 'Phvul.002G228900' => 'pvu', 'Phvul.002G236800' => 'pvu', 'Phvul.003G049500' => 'pvu', 'Phvul.005G072000' => 'pvu', 'Phvul.006G164800' => 'pvu', 'Phvul.006G185100' => 'pvu', 'Phvul.007G090000' => 'pvu', 'Potri.001G399800' => 'ptr', 'Potri.002G149900' => 'ptr', 'Potri.004G044100' => 'ptr', 'Potri.004G177600' => 'ptr', 'Potri.009G138000' => 'ptr', 'Potri.010G094000' => 'ptr', 'Potri.011G053000' => 'ptr', 'Potri.011G119300' => 'ptr', 'Potri.013G113700' => 'ptr', 'Potri.018G107800' => 'ptr', 'Potri.019G084100' => 'ptr', 'Pp3c14_23720' => 'ppa', 'Pp3c16_6340' => 'ppa', 'Pp3c23_13420' => 'ppa', 'Pp3c24_2740' => 'ppa', 'Pp3c25_860' => 'ppa', 'Pp3c8_21750' => 'ppa', 'Prupe.1G273000' => 'ppe', 'Prupe.1G273700' => 'ppe', 'Prupe.1G274100' => 'ppe', 'Prupe.2G023300' => 'ppe', 'Prupe.4G048000' => 'ppe', 'Prupe.4G080400' => 'ppe', 'Prupe.4G181200' => 'ppe', 'Prupe.8G056900' => 'ppe', 'Prupe.8G168700' => 'ppe', 'Psat1g189080' => 'psa', 'Psat1g204760' => 'psa', 'Psat4g175560' => 'psa', 'Psat4g177720' => 'psa', 'Psat5g244240' => 'psa', 'Psat6g010720' => 'psa', 'Psat6g187200' => 'psa', 'Psat7g072040' => 'psa', 'PSO017G3501' => 'pso', 'PSO063G2148' => 'pso', 'PSO063G5608' => 'pso', 'PSO210G6392' => 'pso', 'PSO541G2319' => 'pso', 'PSO541G2836' => 'pso', 'PSO541G4012' => 'pso', 'PSO541G6253' => 'pso', 'PSO675G0580' => 'pso', 'PSO675G0856' => 'pso', 'PSO675G5635' => 'pso', 'PSO675G9157' => 'pso', 'PSO832G1660' => 'pso', 'PSO832G1969' => 'pso', 'QL02p007186' => 'qlo', 'QL02p033904' => 'qlo', 'QL03p064391' => 'qlo', 'QL05p040593' => 'qlo', 'QL05p058242' => 'qlo', 'QL08p021825' => 'qlo', 'QL11p004981' => 'qlo', 'RcHm_v2.0_Chr1g0318301' => 'rch', 'RcHm_v2.0_Chr4g0418501' => 'rch', 'RcHm_v2.0_Chr4g0439971' => 'rch', 'RcHm_v2.0_Chr5g0008541' => 'rch', 'RcHm_v2.0_Chr5g0014101' => 'rch', 'RcHm_v2.0_Chr5g0014131' => 'rch', 'RcHm_v2.0_Chr5g0033621' => 'rch', 'RcHm_v2.0_Chr6g0272041' => 'rch', 'RcHm_v2.0_Chr6g0278831' => 'rch', 'Rhsim02G0130400' => 'rsi', 'Rhsim02G0171100' => 'rsi', 'Rhsim05G0053000' => 'rsi', 'Rhsim05G0053100' => 'rsi', 'Rhsim06G0096500' => 'rsi', 'Rhsim06G0096600' => 'rsi', 'Rhsim06G0199100' => 'rsi', 'Rhsim12G0062300' => 'rsi', 'Rhsim12G0062800' => 'rsi', 'Sabra02G0118600' => 'sbr', 'Sabra04G0027300' => 'sbr', 'Sabra04G0119500' => 'sbr', 'Sabra08G0112500' => 'sbr', 'Sabra11G0036800' => 'sbr', 'Sabra11G0103800' => 'sbr', 'Sabra13G0096300' => 'sbr', 'Sabra16G0262300' => 'sbr', 'Sabra18G0091700' => 'sbr', 'Sabra19G0095400' => 'sbr', 'SalBow6G3080' => 'sbo', 'SalBow7G1157' => 'sbo', 'SalBow7G2123' => 'sbo', 'SalBow7G2285' => 'sbo', 'SalBow7G3537' => 'sbo', 'SalBow8G2947' => 'sbo', 'SalBow8G4463' => 'sbo', 'SalBow8G5466' => 'sbo', 'Sc01g0001750' => 'sci', 'Sc02g0006640' => 'sci', 'Sc02g0006670' => 'sci', 'Sc04g0008220' => 'sci', 'Sc05g0006190' => 'sci', 'Sc08g0002760' => 'sci', 'Sc17g0006170' => 'sci', 'Sc22g0002050' => 'sci', 'Sc23g0001190' => 'sci', 'Sc24g0000980' => 'sci', 'Sed0006245' => 'sed', 'Sed0007543' => 'sed', 'Sed0009411' => 'sed', 'Sed0010765' => 'sed', 'Sed0012944' => 'sed', 'Sed0014682' => 'sed', 'Sed0016174' => 'sed', 'Sed0016796' => 'sed', 'Sed0020317' => 'sed', 'Sed0021467' => 'sed', 'SEGI_01316' => 'sgi', 'SEGI_03374' => 'sgi', 'SEGI_16265' => 'sgi', 'SEGI_18569' => 'sgi', 'SEGI_20351' => 'sgi', 'SEGI_26395' => 'sgi', 'SEGI_29469' => 'sgi', 'SEGI_34771' => 'sgi', 'SEGI_36769' => 'sgi', 'SEGI_37139' => 'sgi', 'SGA_v2.0_scaffold100G29687' => 'sas', 'SGA_v2.0_scaffold118G32472' => 'sas', 'SGA_v2.0_scaffold14G07051' => 'sas', 'SGA_v2.0_scaffold183G39845' => 'sas', 'SGA_v2.0_scaffold1G00174' => 'sas', 'SGA_v2.0_scaffold22G09714' => 'sas', 'SGA_v2.0_scaffold333G48992' => 'sas', 'SGA_v2.0_scaffold46G17491' => 'sas', 'SGA_v2.0_scaffold49G18294' => 'sas', 'SGA_v2.0_scaffold63G21658' => 'sas', 'SHI01741' => 'shi', 'SHI05771' => 'shi', 'SHI18077' => 'shi', 'SHI20525' => 'shi', 'SHI20527' => 'shi', 'SHI20528' => 'shi', 'SMO172G0185' => 'smo', 'SMO198G0020' => 'smo', 'SMO351G0006' => 'smo', 'SMO356G0118' => 'smo', 'SMO358G0296' => 'smo', 'SMO367G0079' => 'smo', 'SMO367G1277' => 'smo', 'Solyc01g014220.3' => 'sly', 'Solyc01g111770.2' => 'sly', 'Solyc02g078180.3' => 'sly', 'Solyc03g006430.3' => 'sly', 'Solyc03g006456.1' => 'sly', 'Solyc03g079860.2' => 'sly', 'Solyc04g079770.3' => 'sly', 'Solyc05g007430.4' => 'sly', 'Solyc07g063150.3' => 'sly', 'Solyc08g016620.3' => 'sly', 'Solyc09g057590.3' => 'sly', 'Solyc09g057600.1' => 'sly', 'Solyc10g009050.3' => 'sly', 'Solyc11g017420.2' => 'sly', 'Sopen01g053810' => 'spe', 'Sopen02g023040' => 'spe', 'Sopen03g002440' => 'spe', 'Sopen04g033350' => 'spe', 'Sopen05g003310' => 'spe', 'Sopen07g004050' => 'spe', 'Sopen07g031340' => 'spe', 'Sopen08g006990' => 'spe', 'Sopen10g004830' => 'spe', 'Sopen11g009370' => 'spe', 'Sp1g24450' => 'spa', 'Sp1g29670' => 'spa', 'Sp1g39600' => 'spa', 'Sp2g11080' => 'spa', 'Sp2g13970' => 'spa', 'Sp4g16130' => 'spa', 'Sp6g13080' => 'spa', 'Sp7g37270' => 'spa', 'TAR371G0065' => 'tar', 'TAR376G0340' => 'tar', 'TAR376G0435' => 'tar', 'TAR381G0002' => 'tar', 'TAR381G1236' => 'tar', 'TAR624G0055' => 'tar', 'TAR624G0324' => 'tar', 'TAR624G0696' => 'tar', 'TAR624G0906' => 'tar', 'TAR625G0107' => 'tar', 'TAR626G0015' => 'tar', 'TAR626G1356' => 'tar', 'TAR627G0888' => 'tar', 'TAR628G0399' => 'tar', 'TAR628G1327' => 'tar', 'TAR629G2831' => 'tar', 'TAR629G2874' => 'tar', 'TAR633G1432' => 'tar', 'TAR633G2771' => 'tar', 'THA.LOC104803394' => 'tha', 'THA.LOC104805153' => 'tha', 'THA.LOC104806784' => 'tha', 'THA.LOC104810473' => 'tha', 'THA.LOC104813100' => 'tha', 'THA.LOC104814215' => 'tha', 'THA.LOC104815554' => 'tha', 'THA.LOC104820544' => 'tha', 'THA.LOC104824754' => 'tha', 'THA.LOC104827717' => 'tha', 'Thecc.02G031400' => 'tca', 'Thecc.02G055900' => 'tca', 'Thecc.02G350800' => 'tca', 'Thecc.06G150900' => 'tca', 'Thecc.06G186600' => 'tca', 'Thecc.07G089600' => 'tca', 'Thecc.08G020400' => 'tca', 'Thecc.08G182100' => 'tca', 'Thhalv10000873m.g' => 'esa', 'Thhalv10004185m.g' => 'esa', 'Thhalv10006981m.g' => 'esa', 'Thhalv10007204m.g' => 'esa', 'Thhalv10011374m.g' => 'esa', 'Thhalv10013482m.g' => 'esa', 'Thhalv10017801m.g' => 'esa', 'Thhalv10024983m.g' => 'esa', 'TPR.G12072' => 'tpr', 'TPR.G15769' => 'tpr', 'TPR.G16504' => 'tpr', 'TPR.G16506' => 'tpr', 'TPR.G24345' => 'tpr', 'TPR.G26666' => 'tpr', 'TPR.G27320' => 'tpr', 'TPR.G31819' => 'tpr', 'TPR.G38879' => 'tpr', 'TPR.G39015' => 'tpr', 'TPR.G8819' => 'tpr', 'TWI09G0924' => 'twi', 'TWI12G0811' => 'twi', 'TWI12G1294' => 'twi', 'TWI31G0150' => 'twi', 'TWI36G1262' => 'twi', 'TWI38G1287' => 'twi', 'TWI38G1633' => 'twi', 'TWI38G1982' => 'twi', 'TWI39G0116' => 'twi', 'TWI60G1011' => 'twi', 'TWI63G0171' => 'twi', 'TWI73G0839' => 'twi', 'TWI79G1511' => 'twi', 'unitig_0.g915' => 'ugi', 'unitig_0.g916' => 'ugi', 'unitig_21.g20219' => 'ugi', 'unitig_21.g20416' => 'ugi', 'unitig_578.g16132' => 'ugi', 'unitig_578.g16718' => 'ugi', 'unitig_62.g23481' => 'ugi', 'unitig_744.g24535' => 'ugi', 'unitig_749.g13525' => 'ugi', 'vmacro01248' => 'vma', 'vmacro02290' => 'vma', 'vmacro10946' => 'vma', 'vmacro11865' => 'vma', 'vmacro12493' => 'vma', 'vmacro17322' => 'vma', 'vmacro21599' => 'vma', 'vmacro23041' => 'vma', 'VMungo0251G0004' => 'vmu', 'VMungo0251G2639' => 'vmu', 'VMungo0251G2967' => 'vmu', 'VMungo0540G0864' => 'vmu', 'VMungo0540G1569' => 'vmu', 'VMungo0647G0317' => 'vmu', 'VMungo0720G1373' => 'vmu', 'VMungo0720G1508' => 'vmu', 'VMungo1080G0485' => 'vmu', 'VMungo1215G3177' => 'vmu', 'Zm00001eb112600' => 'zma', 'Zm00001eb120220' => 'zma', 'Zm00001eb153240' => 'zma', 'Zm00001eb168880' => 'zma', 'Zm00001eb213920' => 'zma', 'Zm00001eb228280' => 'zma', 'Zm00001eb254580' => 'zma', 'Zm00001eb272180' => 'zma', 'Zm00001eb293190' => 'zma', 'Zm00001eb322930' => 'zma', 'Zm00001eb353360' => 'zma', 'Zm00001eb353390' => 'zma', 'Zm00001eb353430' => 'zma', 'Zm00001eb353440' => 'zma', 'Zm00001eb353780' => 'zma' ) $gf_id = 'HOM05D000499' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000499' ) $data_identifier = 'HOM05D000499' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 29, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 12, 'amhyb' => (int) 8, 'aly' => (int) 12, 'aox' => (int) 9, 'arhy' => (int) 26, 'ath' => (int) 8, 'atr' => (int) 7, 'acertr' => (int) 10, 'cqu' => (int) 15, 'bca' => (int) 29, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 11, 'cansat' => (int) 8, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 9, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 8, 'cpa' => (int) 10, 'csa' => (int) 7, 'camsi' => (int) 20, 'dca' => (int) 8, 'din' => (int) 12, 'dzi' => (int) 14, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 6, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 38, 'gra' => (int) 16, 'vvi' => (int) 8, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 5, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 11, 'lja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 11, 'mpo' => (int) 3, 'mbi' => (int) 14, 'mdo' => (int) 14, 'mtr' => (int) 8, 'cme' => (int) 9, 'egut' => (int) 9, 'ama' => (int) 11, 'nta' => (int) 17, 'nnu' => (int) 11, 'oeu' => (int) 18, 'osa' => (int) 8, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 6, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 9, 'rsi' => (int) 9, 'sbr' => (int) 10, 'sbo' => (int) 8, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 10, 'sas' => (int) 10, 'shi' => (int) 6, 'smo' => (int) 7, 'sly' => (int) 14, 'spe' => (int) 10, 'spa' => (int) 8, 'tar' => (int) 19, 'tha' => (int) 10, 'tca' => (int) 8, 'esa' => (int) 8, 'tpr' => (int) 11, 'twi' => (int) 13, 'ugi' => (int) 9, 'vma' => (int) 8, 'vmu' => (int) 10, 'zma' => (int) 15 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb353780' $species_info = array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ) $local_species = 'fan' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000499', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1066', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p29780' => 'bna', 'A02p33180' => 'bna', 'A03p16470' => 'bna', 'A03p66010' => 'bna', 'A04p25970' => 'bna', 'A06p01270' => 'bna', 'A06p46080' => 'bna', 'A07p11400' => 'bna', 'A08p01840' => 'bna', 'A08p08230' => 'bna', 'A08p25740' => 'bna', 'A09p32070' => 'bna', 'A09p37830' => 'bna', 'A09p42840' => 'bna', 'A09p42850' => 'bna', 'Aa31LG10G2060' => 'aar', 'Aa31LG2G7410' => 'aar', 'Aa31LG6G10200' => 'aar', 'Aa31LG6G16680' => 'aar', 'Aa31LG6G8470' => 'aar', 'Aa31LG9G12730' => 'aar', 'Aa31LG9G13680' => 'aar', 'Aa31LG9G14920' => 'aar', 'Aa31LG9G6650' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4977' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5467' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3254' => 'aag', 'Actinidia02578' => 'ach', 'Actinidia07693' => 'ach', 'Actinidia08413' => 'ach', 'Actinidia08414' => 'ach', 'Actinidia15289' => 'ach', 'Actinidia19871' => 'ach', 'Actinidia21475' => 'ach', 'Actinidia22576' => 'ach', 'Actinidia28327' => 'ach', 'Actinidia32491' => 'ach', 'Actinidia39463' => 'ach', 'Actinidia39571' => 'ach', 'Ah.01g013750' => 'amhyb', 'Ah.01g023210' => 'amhyb', 'Ah.04g164850' => 'amhyb', 'Ah.05g178060' => 'amhyb', 'Ah.07g204270' => 'amhyb', 'Ah.07g208480' => 'amhyb', 'Ah.09g237410' => 'amhyb', 'Ah.14g089460' => 'amhyb', 'AL1G41790' => 'aly', 'AL1G49050' => 'aly', 'AL1G53810' => 'aly', 'AL1G61400' => 'aly', 'AL4G18580' => 'aly', 'AL5G12510' => 'aly', 'AL5G12540' => 'aly', 'AL6G43230' => 'aly', 'AL7G10370' => 'aly', 'AL7G19250' => 'aly', 'AL8G12240' => 'aly', 'AL8G18540' => 'aly', 'Aqoxy1G02409' => 'aox', 'Aqoxy2G03993' => 'aox', 'Aqoxy3G03357' => 'aox', 'Aqoxy4G00785' => 'aox', 'Aqoxy5G02598' => 'aox', 'Aqoxy6G00132' => 'aox', 'Aqoxy7G01776' => 'aox', 'Aqoxy7G02316' => 'aox', 'Aqoxy7G03973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.12AFKW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B8730' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27IQR1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3F75VG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3RE0GA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41TCQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.527VTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FIR39' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5W8UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DA38EV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ63HS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H1I32C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HC27T5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4M8AP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7N3CZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9UVDZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LS1NQA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT1D4B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SKC4TM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCFV76' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF9Q1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQWD9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1ZM88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WE07RT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YCK7VH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJE6Q6' => 'arhy', 'AT1G28240' => 'ath', 'AT1G34550' => 'ath', 'AT1G53040' => 'ath', 'AT2G02910' => 'ath', 'AT4G09630' => 'ath', 'AT4G38500' => 'ath', 'AT5G42660' => 'ath', 'AT5G46220' => 'ath', 'ATR0152G026' => 'atr', 'ATR0564G343' => 'atr', 'ATR0706G151' => 'atr', 'ATR0733G207' => 'atr', 'ATR0751G234' => 'atr', 'ATR0807G048' => 'atr', 'ATR1091G084' => 'atr', 'Atru.chr10.1229' => 'acertr', 'Atru.chr10.1230' => 'acertr', 'Atru.chr10.1874' => 'acertr', 'Atru.chr11.1808' => 'acertr', 'Atru.chr13.1795' => 'acertr', 'Atru.chr13.570' => 'acertr', 'Atru.chr2.2608' => 'acertr', 'Atru.chr2.2609' => 'acertr', 'Atru.chr5.3428' => 'acertr', 'Atru.chr8.1171' => 'acertr', 'AUR62004651' => 'cqu', 'AUR62008675' => 'cqu', 'AUR62010014' => 'cqu', 'AUR62013004' => 'cqu', 'AUR62014825' => 'cqu', 'AUR62015015' => 'cqu', 'AUR62015151' => 'cqu', 'AUR62017020' => 'cqu', 'AUR62019422' => 'cqu', 'AUR62023570' => 'cqu', 'AUR62025571' => 'cqu', 'AUR62029098' => 'cqu', 'AUR62033863' => 'cqu', 'AUR62034296' => 'cqu', 'AUR62040075' => 'cqu', 'BcaB02g07334' => 'bca', 'BcaB02g10575' => 'bca', 'BcaB03g12119' => 'bca', 'BcaB03g12120' => 'bca', 'BcaB03g13945' => 'bca', 'BcaB04g17123' => 'bca', 'BcaB04g17867' => 'bca', 'BcaB04g19839' => 'bca', 'BcaB07g30317' => 'bca', 'BcaB07g32432' => 'bca', 'BcaB07g33362' => 'bca', 'BcaB08g36611' => 'bca', 'BcaC01g00028' => 'bca', 'BcaC01g01356' => 'bca', 'BcaC01g02034' => 'bca', 'BcaC01g06051' => 'bca', 'BcaC03g16839' => 'bca', 'BcaC03g17176' => 'bca', 'BcaC05g26829' => 'bca', 'BcaC06g31490' => 'bca', 'BcaC06g35344' => 'bca', 'BcaC06g36570' => 'bca', 'BcaC07g37537' => 'bca', 'BcaC08g43491' => 'bca', 'BcaC08g43773' => 'bca', 'BcaNung00234' => 'bca', 'BcaNung01982' => 'bca', 'BcaNung03707' => 'bca', 'BcaNung06454' => 'bca', 'BolC2t10762H' => 'bol', 'BolC2t11191H' => 'bol', 'BolC3t14322H' => 'bol', 'BolC3t19747H' => 'bol', 'BolC3t21425H' => 'bol', 'BolC4t27800H' => 'bol', 'BolC5t31423H' => 'bol', 'BolC6t35951H' => 'bol', 'BolC6t36282H' => 'bol', 'BolC7t40678H' => 'bol', 'BolC7t40679H' => 'bol', 'BolC7t42222H' => 'bol', 'BolC7t43492H' => 'bol', 'BolC7t46785H' => 'bol', 'BolC8t47853H' => 'bol', 'BolC9t56805H' => 'bol', 'BraA02t08000Z' => 'bra', 'BraA02t08341Z' => 'bra', 'BraA03t10936Z' => 'bra', 'BraA03t15657Z' => 'bra', 'BraA04t18100Z' => 'bra', 'BraA05t20523Z' => 'bra', 'BraA06t23353Z' => 'bra', 'BraA06t27473Z' => 'bra', 'BraA06t27769Z' => 'bra', 'BraA07t28928Z' => 'bra', 'BraA08t32236Z' => 'bra', 'BraA08t32841Z' => 'bra', 'BraA08t34524Z' => 'bra', 'BraA09t38742Z' => 'bra', 'BraA09t39295Z' => 'bra', 'C02p47180' => 'bna', 'C02p50990' => 'bna', 'C03p19360' => 'bna', 'C03p74950' => 'bna', 'C03p91000' => 'bna', 'C04p63260' => 'bna', 'C05p27050' => 'bna', 'C06p08750' => 'bna', 'C06p11490' => 'bna', 'C07p02820' => 'bna', 'C07p17180' => 'bna', 'C07p29440' => 'bna', 'C07p63730' => 'bna', 'C09p39260' => 'bna', 'CAN.G1164.34' => 'can', 'CAN.G1164.39' => 'can', 'CAN.G1530.3' => 'can', 'CAN.G162.61' => 'can', 'CAN.G176.6' => 'can', 'CAN.G289.49' => 'can', 'CAN.G370.21' => 'can', 'CAN.G370.22' => 'can', 'CAN.G371.117' => 'can', 'CAN.G58.37' => 'can', 'CAN.G588.98' => 'can', 'CANSAT21G2266' => 'cansat', 'CANSAT25G2799' => 'cansat', 'CANSAT35G0862' => 'cansat', 'CANSAT35G1704' => 'cansat', 'CANSAT35G1760' => 'cansat', 'CANSAT56G3971' => 'cansat', 'CANSAT56G4116' => 'cansat', 'CANSAT80G1259' => 'cansat', 'CARHR027730' => 'chi', 'CARHR033880' => 'chi', 'CARHR043270' => 'chi', 'CARHR145330' => 'chi', 'CARHR145340' => 'chi', 'CARHR175570' => 'chi', 'CARHR181570' => 'chi', 'CARHR258470' => 'chi', 'CARHR260490' => 'chi', 'CARHR294220' => 'chi', 'Carub.0001s2668' => 'cru', 'Carub.0001s3257' => 'cru', 'Carub.0001s4220' => 'cru', 'Carub.0005s0179' => 'cru', 'Carub.0006s2807' => 'cru', 'Carub.0007s0039' => 'cru', 'Carub.0008s0169' => 'cru', 'Carub.0008s0636' => 'cru', 'Ca_00338_v3' => 'car', 'Ca_00542_v3' => 'car', 'Ca_01844_v3' => 'car', 'Ca_10611_v3' => 'car', 'Ca_13326_v3' => 'car', 'Ca_17944_v3' => 'car', 'Ca_18546_v3' => 'car', 'Ca_24219_v3' => 'car', 'Ca_29972_v3' => 'car', 'CBR_g3681' => 'cbr', 'CBR_g40021' => 'cbr', 'Cc01_g08140' => 'ccan', 'Cc02_g13410' => 'ccan', 'Cc02_g37480' => 'ccan', 'Cc05_g12030' => 'ccan', 'Cc09_g03370' => 'ccan', 'Cc09_g10300' => 'ccan', 'Cc10_g03530' => 'ccan', 'Cc10_g11380' => 'ccan', 'CDE01G0176' => 'cde', 'CDE02G0675' => 'cde', 'CDE02G0942' => 'cde', 'CDE02G1153' => 'cde', 'CDE02G4177' => 'cde', 'CDE04G2117' => 'cde', 'CDE04G2736' => 'cde', 'CDE08G1161' => 'cde', 'CDE09G1238' => 'cde', 'Cfa000467' => 'cfa', 'Cfa000947' => 'cfa', 'Cfa004969' => 'cfa', 'Cfa005284' => 'cfa', 'Cfa008993' => 'cfa', 'Cfa018187' => 'cfa', 'Cfa018454' => 'cfa', 'Cfa020585' => 'cfa', 'Ciclev10000424m.g' => 'ccl', 'Ciclev10003605m.g' => 'ccl', 'Ciclev10007828m.g' => 'ccl', 'Ciclev10014620m.g' => 'ccl', 'Ciclev10015169m.g' => 'ccl', 'Ciclev10018291m.g' => 'ccl', 'Ciclev10028256m.g' => 'ccl', 'Ciclev10033822m.g' => 'ccl', 'CiPaw.05G060300' => 'cil', 'CiPaw.05G085000' => 'cil', 'CiPaw.06G083700' => 'cil', 'CiPaw.06G120300' => 'cil', 'CiPaw.09G060500' => 'cil', 'CiPaw.09G123800' => 'cil', 'CiPaw.11G169700' => 'cil', 'CiPaw.12G118300' => 'cil', 'CiPaw.15G071000' => 'cil', 'CiPaw.15G081900' => 'cil', 'ClCG01G024610' => 'cla', 'ClCG03G006070' => 'cla', 'ClCG05G019250' => 'cla', 'ClCG09G009500' => 'cla', 'ClCG11G008200' => 'cla', 'ClCG11G018080' => 'cla', 'COL.COLO4_17373' => 'col', 'COL.COLO4_22994' => 'col', 'COL.COLO4_26389' => 'col', 'COL.COLO4_27170' => 'col', 'COL.COLO4_31074' => 'col', 'COL.COLO4_31465' => 'col', 'COL.COLO4_36438' => 'col', 'COL.COLO4_36439' => 'col', 'Cpa.g.c38781' => 'cpa', 'Cpa.g.sc128.12' => 'cpa', 'Cpa.g.sc166.7' => 'cpa', 'Cpa.g.sc166.8' => 'cpa', 'Cpa.g.sc20.111' => 'cpa', 'Cpa.g.sc27.31' => 'cpa', 'Cpa.g.sc64.36' => 'cpa', 'Cpa.g.sc64.37' => 'cpa', 'Cpa.g.sc66.49' => 'cpa', 'Cpa.g.sc80.64' => 'cpa', 'CsaV3_1G012320' => 'csa', 'CsaV3_2G008480' => 'csa', 'CsaV3_2G033450' => 'csa', 'CsaV3_3G044830' => 'csa', 'CsaV3_4G033710' => 'csa', 'CsaV3_6G051730' => 'csa', 'CsaV3_7G025350' => 'csa', 'CSS0001067' => 'camsi', 'CSS0005996' => 'camsi', 'CSS0006590' => 'camsi', 'CSS0009673' => 'camsi', 'CSS0010201' => 'camsi', 'CSS0010549' => 'camsi', 'CSS0011364' => 'camsi', 'CSS0014473' => 'camsi', 'CSS0014961' => 'camsi', 'CSS0020191' => 'camsi', 'CSS0021165' => 'camsi', 'CSS0022306' => 'camsi', 'CSS0030591' => 'camsi', 'CSS0030696' => 'camsi', 'CSS0032653' => 'camsi', 'CSS0037487' => 'camsi', 'CSS0041102' => 'camsi', 'CSS0041261' => 'camsi', 'CSS0046246' => 'camsi', 'CSS0049256' => 'camsi', 'DCAR_004075' => 'dca', 'DCAR_011538' => 'dca', 'DCAR_019553' => 'dca', 'DCAR_020952' => 'dca', 'DCAR_021739' => 'dca', 'DCAR_027407' => 'dca', 'DCAR_027913' => 'dca', 'DCAR_028066' => 'dca', 'Dinv05899' => 'din', 'Dinv07563' => 'din', 'Dinv08010' => 'din', 'Dinv14125' => 'din', 'Dinv20172' => 'din', 'Dinv30743' => 'din', 'Dinv31229' => 'din', 'Dinv34162' => 'din', 'Dinv36028' => 'din', 'Dinv39368' => 'din', 'Dinv40565' => 'din', 'Dinv41706' => 'din', 'Duzib052G0089' => 'dzi', 'Duzib116G0641' => 'dzi', 'Duzib132G0069' => 'dzi', 'Duzib132G1219' => 'dzi', 'Duzib147G0278' => 'dzi', 'Duzib160G0480' => 'dzi', 'Duzib170G0661' => 'dzi', 'Duzib177G0591' => 'dzi', 'Duzib187G1353' => 'dzi', 'Duzib192G0858' => 'dzi', 'Duzib192G0883' => 'dzi', 'Duzib213G0506' => 'dzi', 'Duzib235G0289' => 'dzi', 'Duzib251G0422' => 'dzi', 'ECA232G3898' => 'eca', 'ECA233G5950' => 'eca', 'ECA234G1699' => 'eca', 'ECA234G2421' => 'eca', 'ECA236G0426' => 'eca', 'ECA236G4331' => 'eca', 'ECA248G2573' => 'eca', 'EL10Ac1g00077' => 'bvu', 'EL10Ac1g01746' => 'bvu', 'EL10Ac2g03464' => 'bvu', 'EL10Ac4g08176' => 'bvu', 'EL10Ac7g17521' => 'bvu', 'EL10Ac8g20386' => 'bvu', 'EL10Ac9g21343' => 'bvu', 'EL10Ac9g22688' => 'bvu', 'Eucgr.B03434' => 'egr', 'Eucgr.D00618' => 'egr', 'Eucgr.E02395' => 'egr', 'Eucgr.F01129' => 'egr', 'Eucgr.F02622' => 'egr', 'Eucgr.F04207' => 'egr', 'FAN01G0570' => 'fan', 'FAN03G3351' => 'fan', 'FAN06G3702' => 'fan', 'FAN07G2149' => 'fan', 'FAN10G3758' => 'fan', 'FAN11G1170' => 'fan', 'FAN11G2050' => 'fan', 'FAN11G2724' => 'fan', 'FAN12G1700' => 'fan', 'FAN12G2028' => 'fan', 'FAN15G1160' => 'fan', 'FAN15G3063' => 'fan', 'FAN16G2540' => 'fan', 'FAN16G3077' => 'fan', 'FAN16G3624' => 'fan', 'FAN17G0221' => 'fan', 'FAN20G2492' => 'fan', 'FAN20G2905' => 'fan', 'FAN21G0548' => 'fan', 'FAN21G1300' => 'fan', 'FAN22G0077' => 'fan', 'FAN22G1315' => 'fan', 'FAN24G1280' => 'fan', 'FAN24G1445' => 'fan', 'FAN24G3527' => 'fan', 'FAN25G0464' => 'fan', 'FAN25G2885' => 'fan', 'FAN25G3270' => 'fan', 'FAN27G1101' => 'fan', 'FAN27G2846' => 'fan', 'FAN27G3524' => 'fan', 'FvH4_2g11770' => 'fve', 'FvH4_2g15630' => 'fve', 'FvH4_3g05570' => 'fve', 'FvH4_3g09110' => 'fve', 'FvH4_3g19940' => 'fve', 'FvH4_4g04821' => 'fve', 'FvH4_4g31480' => 'fve', 'FvH4_7g01740' => 'fve', 'Glyma.05G130400' => 'gma', 'Glyma.05G156400' => 'gma', 'Glyma.07G197000' => 'gma', 'Glyma.08G085151' => 'gma', 'Glyma.08G114500' => 'gma', 'Glyma.08G300400' => 'gma', 'Glyma.10G215800' => 'gma', 'Glyma.12G224400' => 'gma', 'Glyma.13G179300' => 'gma', 'Glyma.13G218151' => 'gma', 'Glyma.13G238800' => 'gma', 'Glyma.13G276900' => 'gma', 'Glyma.14G078200' => 'gma', 'Glyma.15G074500' => 'gma', 'Glyma.15G094100' => 'gma', 'Glyma.17G247200' => 'gma', 'Glyma.18G120100' => 'gma', 'Glyma.20G176000' => 'gma', 'Gohir.A01G063600' => 'ghi', 'Gohir.A01G170301' => 'ghi', 'Gohir.A02G060500' => 'ghi', 'Gohir.A05G133850' => 'ghi', 'Gohir.A05G161400' => 'ghi', 'Gohir.A06G012900' => 'ghi', 'Gohir.A06G035901' => 'ghi', 'Gohir.A06G127100' => 'ghi', 'Gohir.A06G210500' => 'ghi', 'Gohir.A08G008650' => 'ghi', 'Gohir.A09G072700' => 'ghi', 'Gohir.A09G088301' => 'ghi', 'Gohir.A10G040600' => 'ghi', 'Gohir.A12G036300' => 'ghi', 'Gohir.A12G143350' => 'ghi', 'Gohir.A12G165500' => 'ghi', 'Gohir.A13G145700' => 'ghi', 'Gohir.D01G050000' => 'ghi', 'Gohir.D01G051366' => 'ghi', 'Gohir.D01G161350' => 'ghi', 'Gohir.D02G065900' => 'ghi', 'Gohir.D05G164200' => 'ghi', 'Gohir.D05G355500' => 'ghi', 'Gohir.D06G010400' => 'ghi', 'Gohir.D06G111250' => 'ghi', 'Gohir.D06G132000' => 'ghi', 'Gohir.D06G210500' => 'ghi', 'Gohir.D07G165675' => 'ghi', 'Gohir.D08G062240' => 'ghi', 'Gohir.D08G086101' => 'ghi', 'Gohir.D08G138060' => 'ghi', 'Gohir.D09G072300' => 'ghi', 'Gohir.D10G041400' => 'ghi', 'Gohir.D11G191020' => 'ghi', 'Gohir.D11G212066' => 'ghi', 'Gohir.D12G036300' => 'ghi', 'Gohir.D12G168600' => 'ghi', 'Gohir.D13G150600' => 'ghi', 'Gorai.001G057300' => 'gra', 'Gorai.002G069900' => 'gra', 'Gorai.002G200000' => 'gra', 'Gorai.003G067600' => 'gra', 'Gorai.005G074800' => 'gra', 'Gorai.006G087300' => 'gra', 'Gorai.008G037500' => 'gra', 'Gorai.008G181400' => 'gra', 'Gorai.009G169400' => 'gra', 'Gorai.009G387900' => 'gra', 'Gorai.010G013300' => 'gra', 'Gorai.010G153800' => 'gra', 'Gorai.010G255800' => 'gra', 'Gorai.011G043700' => 'gra', 'Gorai.011G198900' => 'gra', 'Gorai.013G168400' => 'gra', 'GSVIVG01005212001' => 'vvi', 'GSVIVG01006163001' => 'vvi', 'GSVIVG01009625001' => 'vvi', 'GSVIVG01014338001' => 'vvi', 'GSVIVG01020005001' => 'vvi', 'GSVIVG01021450001' => 'vvi', 'GSVIVG01023975001' => 'vvi', 'GSVIVG01034490001' => 'vvi', 'HanXRQChr04g0112071' => 'han', 'HanXRQChr05g0131151' => 'han', 'HanXRQChr09g0262371' => 'han', 'HanXRQChr09g0268401' => 'han', 'HanXRQChr10g0279241' => 'han', 'HanXRQChr10g0297961' => 'han', 'HanXRQChr11g0326231' => 'han', 'HanXRQChr11g0328471' => 'han', 'HanXRQChr16g0507941' => 'han', 'HanXRQChr17g0560211' => 'han', 'Haze_02108' => 'cav', 'Haze_02428' => 'cav', 'Haze_05593' => 'cav', 'Haze_06448' => 'cav', 'Haze_09427' => 'cav', 'Haze_12022' => 'cav', 'Haze_17612' => 'cav', 'Haze_17928' => 'cav', 'Hma1.2p1_0032F.1_g019250' => 'hma', 'Hma1.2p1_0163F.1_g072690' => 'hma', 'Hma1.2p1_0265F.1_g106710' => 'hma', 'Hma1.2p1_0286F.1_g113970' => 'hma', 'Hma1.2p1_0363F.1_g136640' => 'hma', 'Hma1.2p1_0584F.1_g183470' => 'hma', 'Hma1.2p1_0885F.1_g232570' => 'hma', 'HPP92_006022' => 'vpl', 'HPP92_007320' => 'vpl', 'HPP92_011521' => 'vpl', 'HPP92_019387' => 'vpl', 'HPP92_024038' => 'vpl', 'Hund05891' => 'sun', 'Hund06450' => 'sun', 'Hund12053' => 'sun', 'Hund16800' => 'sun', 'Hund21222' => 'sun', 'Hund22896' => 'sun', 'Hund23746' => 'sun', 'Hund27083' => 'sun', 'Lalb_Chr02g0141831' => 'lal', 'Lalb_Chr02g0141841' => 'lal', 'Lalb_Chr05g0220411' => 'lal', 'Lalb_Chr06g0162081' => 'lal', 'Lalb_Chr09g0327651' => 'lal', 'Lalb_Chr13g0295051' => 'lal', 'Lalb_Chr15g0086801' => 'lal', 'Lalb_Chr16g0383781' => 'lal', 'Lalb_Chr16g0383791' => 'lal', 'Lalb_Chr18g0055441' => 'lal', 'Lalb_Chr18g0059611' => 'lal', 'Lalb_Chr20g0109661' => 'lal', 'Lalb_Chr20g0109831' => 'lal', 'Lalb_Chr20g0121871' => 'lal', 'Lalb_Chr22g0355361' => 'lal', 'Lalb_Chr25g0286371' => 'lal', 'Lj1A1187G43' => 'lonja', 'Lj1A1205T50' => 'lonja', 'Lj1A800G33' => 'lonja', 'Lj1C1187T7' => 'lonja', 'Lj1C843T11' => 'lonja', 'Lj1g0010940' => 'lja', 'Lj2A288T69' => 'lonja', 'Lj3g0024276' => 'lja', 'Lj4A47T76' => 'lonja', 'Lj4g0005805' => 'lja', 'Lj4g0006097' => 'lja', 'Lj4g0008528' => 'lja', 'Lj4g0024907' => 'lja', 'Lj5g0012472' => 'lja', 'Lj5g0018648' => 'lja', 'Lj6C789G1' => 'lonja', 'Lj6g0004000' => 'lja', 'Lj7A292G67' => 'lonja', 'Lj7A292T64' => 'lonja', 'Lj9A400T58' => 'lonja', 'Lsat_1_v5_gn_1_126181' => 'lsa', 'Lsat_1_v5_gn_4_123041' => 'lsa', 'Lsat_1_v5_gn_4_133620' => 'lsa', 'Lsat_1_v5_gn_4_53221' => 'lsa', 'Lsat_1_v5_gn_4_71961' => 'lsa', 'Lsat_1_v5_gn_7_105241' => 'lsa', 'Lsat_1_v5_gn_7_21361' => 'lsa', 'Lsat_1_v5_gn_7_28860' => 'lsa', 'Lsat_1_v5_gn_7_31260' => 'lsa', 'Lsat_1_v5_gn_8_52801' => 'lsa', 'Manes.02G191400' => 'mes', 'Manes.03G110100' => 'mes', 'Manes.04G071100' => 'mes', 'Manes.05G100500' => 'mes', 'Manes.05G164700' => 'mes', 'Manes.15G087000' => 'mes', 'Manes.15G121500' => 'mes', 'Manes.16G028300' => 'mes', 'Manes.17G046100' => 'mes', 'Manes.17G069800' => 'mes', 'Manes.18G100500' => 'mes', 'Mapoly0002s0109' => 'mpo', 'Mapoly0024s0007' => 'mpo', 'Mapoly0089s0032' => 'mpo', 'MBI04_g42241_MAGBIO' => 'mbi', 'MBI05_g11988_MAGBIO' => 'mbi', 'MBI05_g35452_MAGBIO' => 'mbi', 'MBI07_g30179_MAGBIO' => 'mbi', 'MBI07_g35859_MAGBIO' => 'mbi', 'MBI07_g35860_MAGBIO' => 'mbi', 'MBI07_g37166_MAGBIO' => 'mbi', 'MBI08_g18172_MAGBIO' => 'mbi', 'MBI09_g08441_MAGBIO' => 'mbi', 'MBI13_g01676_MAGBIO' => 'mbi', 'MBI14_g42955_MAGBIO' => 'mbi', 'MBI16_g13161_MAGBIO' => 'mbi', 'MBI17_g27204_MAGBIO' => 'mbi', 'MBI19_g21595_MAGBIO' => 'mbi', 'MD00G1148400' => 'mdo', 'MD02G1301200' => 'mdo', 'MD03G1227800' => 'mdo', 'MD05G1041100' => 'mdo', 'MD05G1124800' => 'mdo', 'MD05G1284000' => 'mdo', 'MD05G1338800' => 'mdo', 'MD05G1338900' => 'mdo', 'MD07G1022800' => 'mdo', 'MD10G1047500' => 'mdo', 'MD10G1127500' => 'mdo', 'MD10G1262300' => 'mdo', 'MD10G1293800' => 'mdo', 'MD16G1074300' => 'mdo', 'Medtr1g021670' => 'mtr', 'Medtr1g096320' => 'mtr', 'Medtr2g013690' => 'mtr', 'Medtr2g019450' => 'mtr', 'Medtr2g085170' => 'mtr', 'Medtr4g088785' => 'mtr', 'Medtr8g055930' => 'mtr', 'Medtr8g085850' => 'mtr', 'MELO3C002605.2' => 'cme', 'MELO3C003891.2' => 'cme', 'MELO3C004012.2' => 'cme', 'MELO3C007134.2' => 'cme', 'MELO3C008118.2' => 'cme', 'MELO3C016700.2' => 'cme', 'MELO3C024127.2' => 'cme', 'MELO3C033361.2' => 'cme', 'MELO3C033362.2' => 'cme', 'Migut.C00430' => 'egut', 'Migut.C01246' => 'egut', 'Migut.E00101' => 'egut', 'Migut.H01486' => 'egut', 'Migut.H01939' => 'egut', 'Migut.K00360' => 'egut', 'Migut.M00910' => 'egut', 'Migut.M01139' => 'egut', 'Migut.N02677' => 'egut', 'MSTRG.13252' => 'ama', 'MSTRG.14701' => 'ama', 'MSTRG.1521' => 'ama', 'MSTRG.15884' => 'ama', 'MSTRG.16242' => 'ama', 'MSTRG.22285' => 'ama', 'MSTRG.22444' => 'ama', 'MSTRG.2349' => 'ama', 'MSTRG.26308' => 'ama', 'MSTRG.28296' => 'ama', 'MSTRG.9895' => 'ama', 'Nitab4.5_0000110g0060' => 'nta', 'Nitab4.5_0000420g0130' => 'nta', 'Nitab4.5_0000422g0030' => 'nta', 'Nitab4.5_0000560g0180' => 'nta', 'Nitab4.5_0000703g0100' => 'nta', 'Nitab4.5_0000786g0200' => 'nta', 'Nitab4.5_0001336g0020' => 'nta', 'Nitab4.5_0001796g0030' => 'nta', 'Nitab4.5_0003348g0060' => 'nta', 'Nitab4.5_0003698g0040' => 'nta', 'Nitab4.5_0003942g0090' => 'nta', 'Nitab4.5_0004775g0070' => 'nta', 'Nitab4.5_0004864g0030' => 'nta', 'Nitab4.5_0005615g0020' => 'nta', 'Nitab4.5_0009288g0030' => 'nta', 'Nitab4.5_0009341g0010' => 'nta', 'Nitab4.5_0009535g0010' => 'nta', 'Nn1g03995' => 'nnu', 'Nn1g04100' => 'nnu', 'Nn1g06530' => 'nnu', 'Nn3g16404' => 'nnu', 'Nn3g17212' => 'nnu', 'Nn3g20776' => 'nnu', 'Nn3g21923' => 'nnu', 'Nn5g27737' => 'nnu', 'Nn5g29461' => 'nnu', 'Nn7g38355' => 'nnu', 'Nn8g39873' => 'nnu', 'Oeu000548.2' => 'oeu', 'Oeu004672.1' => 'oeu', 'Oeu015605.2' => 'oeu', 'Oeu016092.1' => 'oeu', 'Oeu017879.3' => 'oeu', 'Oeu024910.1' => 'oeu', 'Oeu028965.1' => 'oeu', 'Oeu031269.1' => 'oeu', 'Oeu031270.1' => 'oeu', 'Oeu032535.1' => 'oeu', 'Oeu034151.1' => 'oeu', 'Oeu034152.1' => 'oeu', 'Oeu034588.2' => 'oeu', 'Oeu050846.1' => 'oeu', 'Oeu050849.2' => 'oeu', 'Oeu051063.2' => 'oeu', 'Oeu052368.1' => 'oeu', 'Oeu052370.1' => 'oeu', 'Os01g0210400' => 'osa', 'Os01g0304300' => 'osa', 'Os01g0749100' => 'osa', 'Os02g0745800' => 'osa', 'Os03g0769050' => 'osa', 'Os05g0531500' => 'osa', 'Os06g0724300' => 'osa', 'Os11g0198100' => 'osa', 'Peaxi162Scf00069g01425' => 'pax', 'Peaxi162Scf00280g00811' => 'pax', 'Peaxi162Scf00310g00615' => 'pax', 'Peaxi162Scf00362g00542' => 'pax', 'Peaxi162Scf00461g00310' => 'pax', 'Peaxi162Scf00530g00118' => 'pax', 'Peaxi162Scf00541g00057' => 'pax', 'Peaxi162Scf00661g00017' => 'pax', 'Peaxi162Scf00926g00027' => 'pax', 'Peaxi162Scf01064g00263' => 'pax', 'Peaxi162Scf01211g00135' => 'pax', 'PGR004G2336' => 'pgr', 'PGR042G0327' => 'pgr', 'PGR042G1957' => 'pgr', 'PGR042G2003' => 'pgr', 'PGR042G3929' => 'pgr', 'PGR083G1137' => 'pgr', 'PGR083G1364' => 'pgr', 'PGSC0003DMG400003381' => 'stu', 'PGSC0003DMG400003417' => 'stu', 'PGSC0003DMG400008981' => 'stu', 'PGSC0003DMG400012417' => 'stu', 'PGSC0003DMG400012823' => 'stu', 'PGSC0003DMG400016885' => 'stu', 'PGSC0003DMG400022812' => 'stu', 'PGSC0003DMG400029726' => 'stu', 'PGSC0003DMG401009243' => 'stu', 'PGSC0003DMG401031505' => 'stu', 'PGSC0003DMG402031505' => 'stu', 'Phvul.001G017600' => 'pvu', 'Phvul.002G193500' => 'pvu', 'Phvul.002G228900' => 'pvu', 'Phvul.002G236800' => 'pvu', 'Phvul.003G049500' => 'pvu', 'Phvul.005G072000' => 'pvu', 'Phvul.006G164800' => 'pvu', 'Phvul.006G185100' => 'pvu', 'Phvul.007G090000' => 'pvu', 'Potri.001G399800' => 'ptr', 'Potri.002G149900' => 'ptr', 'Potri.004G044100' => 'ptr', 'Potri.004G177600' => 'ptr', 'Potri.009G138000' => 'ptr', 'Potri.010G094000' => 'ptr', 'Potri.011G053000' => 'ptr', 'Potri.011G119300' => 'ptr', 'Potri.013G113700' => 'ptr', 'Potri.018G107800' => 'ptr', 'Potri.019G084100' => 'ptr', 'Pp3c14_23720' => 'ppa', 'Pp3c16_6340' => 'ppa', 'Pp3c23_13420' => 'ppa', 'Pp3c24_2740' => 'ppa', 'Pp3c25_860' => 'ppa', 'Pp3c8_21750' => 'ppa', 'Prupe.1G273000' => 'ppe', 'Prupe.1G273700' => 'ppe', 'Prupe.1G274100' => 'ppe', 'Prupe.2G023300' => 'ppe', 'Prupe.4G048000' => 'ppe', 'Prupe.4G080400' => 'ppe', 'Prupe.4G181200' => 'ppe', 'Prupe.8G056900' => 'ppe', 'Prupe.8G168700' => 'ppe', 'Psat1g189080' => 'psa', 'Psat1g204760' => 'psa', 'Psat4g175560' => 'psa', 'Psat4g177720' => 'psa', 'Psat5g244240' => 'psa', 'Psat6g010720' => 'psa', 'Psat6g187200' => 'psa', 'Psat7g072040' => 'psa', 'PSO017G3501' => 'pso', 'PSO063G2148' => 'pso', 'PSO063G5608' => 'pso', 'PSO210G6392' => 'pso', 'PSO541G2319' => 'pso', 'PSO541G2836' => 'pso', 'PSO541G4012' => 'pso', 'PSO541G6253' => 'pso', 'PSO675G0580' => 'pso', 'PSO675G0856' => 'pso', 'PSO675G5635' => 'pso', 'PSO675G9157' => 'pso', 'PSO832G1660' => 'pso', 'PSO832G1969' => 'pso', 'QL02p007186' => 'qlo', 'QL02p033904' => 'qlo', 'QL03p064391' => 'qlo', 'QL05p040593' => 'qlo', 'QL05p058242' => 'qlo', 'QL08p021825' => 'qlo', 'QL11p004981' => 'qlo', 'RcHm_v2.0_Chr1g0318301' => 'rch', 'RcHm_v2.0_Chr4g0418501' => 'rch', 'RcHm_v2.0_Chr4g0439971' => 'rch', 'RcHm_v2.0_Chr5g0008541' => 'rch', 'RcHm_v2.0_Chr5g0014101' => 'rch', 'RcHm_v2.0_Chr5g0014131' => 'rch', 'RcHm_v2.0_Chr5g0033621' => 'rch', 'RcHm_v2.0_Chr6g0272041' => 'rch', 'RcHm_v2.0_Chr6g0278831' => 'rch', 'Rhsim02G0130400' => 'rsi', 'Rhsim02G0171100' => 'rsi', 'Rhsim05G0053000' => 'rsi', 'Rhsim05G0053100' => 'rsi', 'Rhsim06G0096500' => 'rsi', 'Rhsim06G0096600' => 'rsi', 'Rhsim06G0199100' => 'rsi', 'Rhsim12G0062300' => 'rsi', 'Rhsim12G0062800' => 'rsi', 'Sabra02G0118600' => 'sbr', 'Sabra04G0027300' => 'sbr', 'Sabra04G0119500' => 'sbr', 'Sabra08G0112500' => 'sbr', 'Sabra11G0036800' => 'sbr', 'Sabra11G0103800' => 'sbr', 'Sabra13G0096300' => 'sbr', 'Sabra16G0262300' => 'sbr', 'Sabra18G0091700' => 'sbr', 'Sabra19G0095400' => 'sbr', 'SalBow6G3080' => 'sbo', 'SalBow7G1157' => 'sbo', 'SalBow7G2123' => 'sbo', 'SalBow7G2285' => 'sbo', 'SalBow7G3537' => 'sbo', 'SalBow8G2947' => 'sbo', 'SalBow8G4463' => 'sbo', 'SalBow8G5466' => 'sbo', 'Sc01g0001750' => 'sci', 'Sc02g0006640' => 'sci', 'Sc02g0006670' => 'sci', 'Sc04g0008220' => 'sci', 'Sc05g0006190' => 'sci', 'Sc08g0002760' => 'sci', 'Sc17g0006170' => 'sci', 'Sc22g0002050' => 'sci', 'Sc23g0001190' => 'sci', 'Sc24g0000980' => 'sci', 'Sed0006245' => 'sed', 'Sed0007543' => 'sed', 'Sed0009411' => 'sed', 'Sed0010765' => 'sed', 'Sed0012944' => 'sed', 'Sed0014682' => 'sed', 'Sed0016174' => 'sed', 'Sed0016796' => 'sed', 'Sed0020317' => 'sed', 'Sed0021467' => 'sed', 'SEGI_01316' => 'sgi', 'SEGI_03374' => 'sgi', 'SEGI_16265' => 'sgi', 'SEGI_18569' => 'sgi', 'SEGI_20351' => 'sgi', 'SEGI_26395' => 'sgi', 'SEGI_29469' => 'sgi', 'SEGI_34771' => 'sgi', 'SEGI_36769' => 'sgi', 'SEGI_37139' => 'sgi', 'SGA_v2.0_scaffold100G29687' => 'sas', 'SGA_v2.0_scaffold118G32472' => 'sas', 'SGA_v2.0_scaffold14G07051' => 'sas', 'SGA_v2.0_scaffold183G39845' => 'sas', 'SGA_v2.0_scaffold1G00174' => 'sas', 'SGA_v2.0_scaffold22G09714' => 'sas', 'SGA_v2.0_scaffold333G48992' => 'sas', 'SGA_v2.0_scaffold46G17491' => 'sas', 'SGA_v2.0_scaffold49G18294' => 'sas', 'SGA_v2.0_scaffold63G21658' => 'sas', 'SHI01741' => 'shi', 'SHI05771' => 'shi', 'SHI18077' => 'shi', 'SHI20525' => 'shi', 'SHI20527' => 'shi', 'SHI20528' => 'shi', 'SMO172G0185' => 'smo', 'SMO198G0020' => 'smo', 'SMO351G0006' => 'smo', 'SMO356G0118' => 'smo', 'SMO358G0296' => 'smo', 'SMO367G0079' => 'smo', 'SMO367G1277' => 'smo', 'Solyc01g014220.3' => 'sly', 'Solyc01g111770.2' => 'sly', 'Solyc02g078180.3' => 'sly', 'Solyc03g006430.3' => 'sly', 'Solyc03g006456.1' => 'sly', 'Solyc03g079860.2' => 'sly', 'Solyc04g079770.3' => 'sly', 'Solyc05g007430.4' => 'sly', 'Solyc07g063150.3' => 'sly', 'Solyc08g016620.3' => 'sly', 'Solyc09g057590.3' => 'sly', 'Solyc09g057600.1' => 'sly', 'Solyc10g009050.3' => 'sly', 'Solyc11g017420.2' => 'sly', 'Sopen01g053810' => 'spe', 'Sopen02g023040' => 'spe', 'Sopen03g002440' => 'spe', 'Sopen04g033350' => 'spe', 'Sopen05g003310' => 'spe', 'Sopen07g004050' => 'spe', 'Sopen07g031340' => 'spe', 'Sopen08g006990' => 'spe', 'Sopen10g004830' => 'spe', 'Sopen11g009370' => 'spe', 'Sp1g24450' => 'spa', 'Sp1g29670' => 'spa', 'Sp1g39600' => 'spa', 'Sp2g11080' => 'spa', 'Sp2g13970' => 'spa', 'Sp4g16130' => 'spa', 'Sp6g13080' => 'spa', 'Sp7g37270' => 'spa', 'TAR371G0065' => 'tar', 'TAR376G0340' => 'tar', 'TAR376G0435' => 'tar', 'TAR381G0002' => 'tar', 'TAR381G1236' => 'tar', 'TAR624G0055' => 'tar', 'TAR624G0324' => 'tar', 'TAR624G0696' => 'tar', 'TAR624G0906' => 'tar', 'TAR625G0107' => 'tar', 'TAR626G0015' => 'tar', 'TAR626G1356' => 'tar', 'TAR627G0888' => 'tar', 'TAR628G0399' => 'tar', 'TAR628G1327' => 'tar', 'TAR629G2831' => 'tar', 'TAR629G2874' => 'tar', 'TAR633G1432' => 'tar', 'TAR633G2771' => 'tar', 'THA.LOC104803394' => 'tha', 'THA.LOC104805153' => 'tha', 'THA.LOC104806784' => 'tha', 'THA.LOC104810473' => 'tha', 'THA.LOC104813100' => 'tha', 'THA.LOC104814215' => 'tha', 'THA.LOC104815554' => 'tha', 'THA.LOC104820544' => 'tha', 'THA.LOC104824754' => 'tha', 'THA.LOC104827717' => 'tha', 'Thecc.02G031400' => 'tca', 'Thecc.02G055900' => 'tca', 'Thecc.02G350800' => 'tca', 'Thecc.06G150900' => 'tca', 'Thecc.06G186600' => 'tca', 'Thecc.07G089600' => 'tca', 'Thecc.08G020400' => 'tca', 'Thecc.08G182100' => 'tca', 'Thhalv10000873m.g' => 'esa', 'Thhalv10004185m.g' => 'esa', 'Thhalv10006981m.g' => 'esa', 'Thhalv10007204m.g' => 'esa', 'Thhalv10011374m.g' => 'esa', 'Thhalv10013482m.g' => 'esa', 'Thhalv10017801m.g' => 'esa', 'Thhalv10024983m.g' => 'esa', 'TPR.G12072' => 'tpr', 'TPR.G15769' => 'tpr', 'TPR.G16504' => 'tpr', 'TPR.G16506' => 'tpr', 'TPR.G24345' => 'tpr', 'TPR.G26666' => 'tpr', 'TPR.G27320' => 'tpr', 'TPR.G31819' => 'tpr', 'TPR.G38879' => 'tpr', 'TPR.G39015' => 'tpr', 'TPR.G8819' => 'tpr', 'TWI09G0924' => 'twi', 'TWI12G0811' => 'twi', 'TWI12G1294' => 'twi', 'TWI31G0150' => 'twi', 'TWI36G1262' => 'twi', 'TWI38G1287' => 'twi', 'TWI38G1633' => 'twi', 'TWI38G1982' => 'twi', 'TWI39G0116' => 'twi', 'TWI60G1011' => 'twi', 'TWI63G0171' => 'twi', 'TWI73G0839' => 'twi', 'TWI79G1511' => 'twi', 'unitig_0.g915' => 'ugi', 'unitig_0.g916' => 'ugi', 'unitig_21.g20219' => 'ugi', 'unitig_21.g20416' => 'ugi', 'unitig_578.g16132' => 'ugi', 'unitig_578.g16718' => 'ugi', 'unitig_62.g23481' => 'ugi', 'unitig_744.g24535' => 'ugi', 'unitig_749.g13525' => 'ugi', 'vmacro01248' => 'vma', 'vmacro02290' => 'vma', 'vmacro10946' => 'vma', 'vmacro11865' => 'vma', 'vmacro12493' => 'vma', 'vmacro17322' => 'vma', 'vmacro21599' => 'vma', 'vmacro23041' => 'vma', 'VMungo0251G0004' => 'vmu', 'VMungo0251G2639' => 'vmu', 'VMungo0251G2967' => 'vmu', 'VMungo0540G0864' => 'vmu', 'VMungo0540G1569' => 'vmu', 'VMungo0647G0317' => 'vmu', 'VMungo0720G1373' => 'vmu', 'VMungo0720G1508' => 'vmu', 'VMungo1080G0485' => 'vmu', 'VMungo1215G3177' => 'vmu', 'Zm00001eb112600' => 'zma', 'Zm00001eb120220' => 'zma', 'Zm00001eb153240' => 'zma', 'Zm00001eb168880' => 'zma', 'Zm00001eb213920' => 'zma', 'Zm00001eb228280' => 'zma', 'Zm00001eb254580' => 'zma', 'Zm00001eb272180' => 'zma', 'Zm00001eb293190' => 'zma', 'Zm00001eb322930' => 'zma', 'Zm00001eb353360' => 'zma', 'Zm00001eb353390' => 'zma', 'Zm00001eb353430' => 'zma', 'Zm00001eb353440' => 'zma', 'Zm00001eb353780' => 'zma' ), 'gf_id' => 'HOM05D000499', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000499' ), 'data_identifier' => 'HOM05D000499', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000499', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1066', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p29780' => 'bna', 'A02p33180' => 'bna', 'A03p16470' => 'bna', 'A03p66010' => 'bna', 'A04p25970' => 'bna', 'A06p01270' => 'bna', 'A06p46080' => 'bna', 'A07p11400' => 'bna', 'A08p01840' => 'bna', 'A08p08230' => 'bna', 'A08p25740' => 'bna', 'A09p32070' => 'bna', 'A09p37830' => 'bna', 'A09p42840' => 'bna', 'A09p42850' => 'bna', 'Aa31LG10G2060' => 'aar', 'Aa31LG2G7410' => 'aar', 'Aa31LG6G10200' => 'aar', 'Aa31LG6G16680' => 'aar', 'Aa31LG6G8470' => 'aar', 'Aa31LG9G12730' => 'aar', 'Aa31LG9G13680' => 'aar', 'Aa31LG9G14920' => 'aar', 'Aa31LG9G6650' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4977' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5467' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3254' => 'aag', 'Actinidia02578' => 'ach', 'Actinidia07693' => 'ach', 'Actinidia08413' => 'ach', 'Actinidia08414' => 'ach', 'Actinidia15289' => 'ach', 'Actinidia19871' => 'ach', 'Actinidia21475' => 'ach', 'Actinidia22576' => 'ach', 'Actinidia28327' => 'ach', 'Actinidia32491' => 'ach', 'Actinidia39463' => 'ach', 'Actinidia39571' => 'ach', 'Ah.01g013750' => 'amhyb', 'Ah.01g023210' => 'amhyb', 'Ah.04g164850' => 'amhyb', 'Ah.05g178060' => 'amhyb', 'Ah.07g204270' => 'amhyb', 'Ah.07g208480' => 'amhyb', 'Ah.09g237410' => 'amhyb', 'Ah.14g089460' => 'amhyb', 'AL1G41790' => 'aly', 'AL1G49050' => 'aly', 'AL1G53810' => 'aly', 'AL1G61400' => 'aly', 'AL4G18580' => 'aly', 'AL5G12510' => 'aly', 'AL5G12540' => 'aly', 'AL6G43230' => 'aly', 'AL7G10370' => 'aly', 'AL7G19250' => 'aly', 'AL8G12240' => 'aly', 'AL8G18540' => 'aly', 'Aqoxy1G02409' => 'aox', 'Aqoxy2G03993' => 'aox', 'Aqoxy3G03357' => 'aox', 'Aqoxy4G00785' => 'aox', 'Aqoxy5G02598' => 'aox', 'Aqoxy6G00132' => 'aox', 'Aqoxy7G01776' => 'aox', 'Aqoxy7G02316' => 'aox', 'Aqoxy7G03973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.12AFKW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B8730' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27IQR1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3F75VG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3RE0GA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41TCQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.527VTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FIR39' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5W8UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DA38EV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ63HS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H1I32C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HC27T5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4M8AP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7N3CZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9UVDZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LS1NQA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT1D4B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SKC4TM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCFV76' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF9Q1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQWD9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1ZM88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WE07RT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YCK7VH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJE6Q6' => 'arhy', 'AT1G28240' => 'ath', 'AT1G34550' => 'ath', 'AT1G53040' => 'ath', 'AT2G02910' => 'ath', 'AT4G09630' => 'ath', 'AT4G38500' => 'ath', 'AT5G42660' => 'ath', 'AT5G46220' => 'ath', 'ATR0152G026' => 'atr', 'ATR0564G343' => 'atr', 'ATR0706G151' => 'atr', 'ATR0733G207' => 'atr', 'ATR0751G234' => 'atr', 'ATR0807G048' => 'atr', 'ATR1091G084' => 'atr', 'Atru.chr10.1229' => 'acertr', 'Atru.chr10.1230' => 'acertr', 'Atru.chr10.1874' => 'acertr', 'Atru.chr11.1808' => 'acertr', 'Atru.chr13.1795' => 'acertr', 'Atru.chr13.570' => 'acertr', 'Atru.chr2.2608' => 'acertr', 'Atru.chr2.2609' => 'acertr', 'Atru.chr5.3428' => 'acertr', 'Atru.chr8.1171' => 'acertr', 'AUR62004651' => 'cqu', 'AUR62008675' => 'cqu', 'AUR62010014' => 'cqu', 'AUR62013004' => 'cqu', 'AUR62014825' => 'cqu', 'AUR62015015' => 'cqu', 'AUR62015151' => 'cqu', 'AUR62017020' => 'cqu', 'AUR62019422' => 'cqu', 'AUR62023570' => 'cqu', 'AUR62025571' => 'cqu', 'AUR62029098' => 'cqu', 'AUR62033863' => 'cqu', 'AUR62034296' => 'cqu', 'AUR62040075' => 'cqu', 'BcaB02g07334' => 'bca', 'BcaB02g10575' => 'bca', 'BcaB03g12119' => 'bca', 'BcaB03g12120' => 'bca', 'BcaB03g13945' => 'bca', 'BcaB04g17123' => 'bca', 'BcaB04g17867' => 'bca', 'BcaB04g19839' => 'bca', 'BcaB07g30317' => 'bca', 'BcaB07g32432' => 'bca', 'BcaB07g33362' => 'bca', 'BcaB08g36611' => 'bca', 'BcaC01g00028' => 'bca', 'BcaC01g01356' => 'bca', 'BcaC01g02034' => 'bca', 'BcaC01g06051' => 'bca', 'BcaC03g16839' => 'bca', 'BcaC03g17176' => 'bca', 'BcaC05g26829' => 'bca', 'BcaC06g31490' => 'bca', 'BcaC06g35344' => 'bca', 'BcaC06g36570' => 'bca', 'BcaC07g37537' => 'bca', 'BcaC08g43491' => 'bca', 'BcaC08g43773' => 'bca', 'BcaNung00234' => 'bca', 'BcaNung01982' => 'bca', 'BcaNung03707' => 'bca', 'BcaNung06454' => 'bca', 'BolC2t10762H' => 'bol', 'BolC2t11191H' => 'bol', 'BolC3t14322H' => 'bol', 'BolC3t19747H' => 'bol', 'BolC3t21425H' => 'bol', 'BolC4t27800H' => 'bol', 'BolC5t31423H' => 'bol', 'BolC6t35951H' => 'bol', 'BolC6t36282H' => 'bol', 'BolC7t40678H' => 'bol', 'BolC7t40679H' => 'bol', 'BolC7t42222H' => 'bol', 'BolC7t43492H' => 'bol', 'BolC7t46785H' => 'bol', 'BolC8t47853H' => 'bol', 'BolC9t56805H' => 'bol', 'BraA02t08000Z' => 'bra', 'BraA02t08341Z' => 'bra', 'BraA03t10936Z' => 'bra', 'BraA03t15657Z' => 'bra', 'BraA04t18100Z' => 'bra', 'BraA05t20523Z' => 'bra', 'BraA06t23353Z' => 'bra', 'BraA06t27473Z' => 'bra', 'BraA06t27769Z' => 'bra', 'BraA07t28928Z' => 'bra', 'BraA08t32236Z' => 'bra', 'BraA08t32841Z' => 'bra', 'BraA08t34524Z' => 'bra', 'BraA09t38742Z' => 'bra', 'BraA09t39295Z' => 'bra', 'C02p47180' => 'bna', 'C02p50990' => 'bna', 'C03p19360' => 'bna', 'C03p74950' => 'bna', 'C03p91000' => 'bna', 'C04p63260' => 'bna', 'C05p27050' => 'bna', 'C06p08750' => 'bna', 'C06p11490' => 'bna', 'C07p02820' => 'bna', 'C07p17180' => 'bna', 'C07p29440' => 'bna', 'C07p63730' => 'bna', 'C09p39260' => 'bna', 'CAN.G1164.34' => 'can', 'CAN.G1164.39' => 'can', 'CAN.G1530.3' => 'can', 'CAN.G162.61' => 'can', 'CAN.G176.6' => 'can', 'CAN.G289.49' => 'can', 'CAN.G370.21' => 'can', 'CAN.G370.22' => 'can', 'CAN.G371.117' => 'can', 'CAN.G58.37' => 'can', 'CAN.G588.98' => 'can', 'CANSAT21G2266' => 'cansat', 'CANSAT25G2799' => 'cansat', 'CANSAT35G0862' => 'cansat', 'CANSAT35G1704' => 'cansat', 'CANSAT35G1760' => 'cansat', 'CANSAT56G3971' => 'cansat', 'CANSAT56G4116' => 'cansat', 'CANSAT80G1259' => 'cansat', 'CARHR027730' => 'chi', 'CARHR033880' => 'chi', 'CARHR043270' => 'chi', 'CARHR145330' => 'chi', 'CARHR145340' => 'chi', 'CARHR175570' => 'chi', 'CARHR181570' => 'chi', 'CARHR258470' => 'chi', 'CARHR260490' => 'chi', 'CARHR294220' => 'chi', 'Carub.0001s2668' => 'cru', 'Carub.0001s3257' => 'cru', 'Carub.0001s4220' => 'cru', 'Carub.0005s0179' => 'cru', 'Carub.0006s2807' => 'cru', 'Carub.0007s0039' => 'cru', 'Carub.0008s0169' => 'cru', 'Carub.0008s0636' => 'cru', 'Ca_00338_v3' => 'car', 'Ca_00542_v3' => 'car', 'Ca_01844_v3' => 'car', 'Ca_10611_v3' => 'car', 'Ca_13326_v3' => 'car', 'Ca_17944_v3' => 'car', 'Ca_18546_v3' => 'car', 'Ca_24219_v3' => 'car', 'Ca_29972_v3' => 'car', 'CBR_g3681' => 'cbr', 'CBR_g40021' => 'cbr', 'Cc01_g08140' => 'ccan', 'Cc02_g13410' => 'ccan', 'Cc02_g37480' => 'ccan', 'Cc05_g12030' => 'ccan', 'Cc09_g03370' => 'ccan', 'Cc09_g10300' => 'ccan', 'Cc10_g03530' => 'ccan', 'Cc10_g11380' => 'ccan', 'CDE01G0176' => 'cde', 'CDE02G0675' => 'cde', 'CDE02G0942' => 'cde', 'CDE02G1153' => 'cde', 'CDE02G4177' => 'cde', 'CDE04G2117' => 'cde', 'CDE04G2736' => 'cde', 'CDE08G1161' => 'cde', 'CDE09G1238' => 'cde', 'Cfa000467' => 'cfa', 'Cfa000947' => 'cfa', 'Cfa004969' => 'cfa', 'Cfa005284' => 'cfa', 'Cfa008993' => 'cfa', 'Cfa018187' => 'cfa', 'Cfa018454' => 'cfa', 'Cfa020585' => 'cfa', 'Ciclev10000424m.g' => 'ccl', 'Ciclev10003605m.g' => 'ccl', 'Ciclev10007828m.g' => 'ccl', 'Ciclev10014620m.g' => 'ccl', 'Ciclev10015169m.g' => 'ccl', 'Ciclev10018291m.g' => 'ccl', 'Ciclev10028256m.g' => 'ccl', 'Ciclev10033822m.g' => 'ccl', 'CiPaw.05G060300' => 'cil', 'CiPaw.05G085000' => 'cil', 'CiPaw.06G083700' => 'cil', 'CiPaw.06G120300' => 'cil', 'CiPaw.09G060500' => 'cil', 'CiPaw.09G123800' => 'cil', 'CiPaw.11G169700' => 'cil', 'CiPaw.12G118300' => 'cil', 'CiPaw.15G071000' => 'cil', 'CiPaw.15G081900' => 'cil', 'ClCG01G024610' => 'cla', 'ClCG03G006070' => 'cla', 'ClCG05G019250' => 'cla', 'ClCG09G009500' => 'cla', 'ClCG11G008200' => 'cla', 'ClCG11G018080' => 'cla', 'COL.COLO4_17373' => 'col', 'COL.COLO4_22994' => 'col', 'COL.COLO4_26389' => 'col', 'COL.COLO4_27170' => 'col', 'COL.COLO4_31074' => 'col', 'COL.COLO4_31465' => 'col', 'COL.COLO4_36438' => 'col', 'COL.COLO4_36439' => 'col', 'Cpa.g.c38781' => 'cpa', 'Cpa.g.sc128.12' => 'cpa', 'Cpa.g.sc166.7' => 'cpa', 'Cpa.g.sc166.8' => 'cpa', 'Cpa.g.sc20.111' => 'cpa', 'Cpa.g.sc27.31' => 'cpa', 'Cpa.g.sc64.36' => 'cpa', 'Cpa.g.sc64.37' => 'cpa', 'Cpa.g.sc66.49' => 'cpa', 'Cpa.g.sc80.64' => 'cpa', 'CsaV3_1G012320' => 'csa', 'CsaV3_2G008480' => 'csa', 'CsaV3_2G033450' => 'csa', 'CsaV3_3G044830' => 'csa', 'CsaV3_4G033710' => 'csa', 'CsaV3_6G051730' => 'csa', 'CsaV3_7G025350' => 'csa', 'CSS0001067' => 'camsi', 'CSS0005996' => 'camsi', 'CSS0006590' => 'camsi', 'CSS0009673' => 'camsi', 'CSS0010201' => 'camsi', 'CSS0010549' => 'camsi', 'CSS0011364' => 'camsi', 'CSS0014473' => 'camsi', 'CSS0014961' => 'camsi', 'CSS0020191' => 'camsi', 'CSS0021165' => 'camsi', 'CSS0022306' => 'camsi', 'CSS0030591' => 'camsi', 'CSS0030696' => 'camsi', 'CSS0032653' => 'camsi', 'CSS0037487' => 'camsi', 'CSS0041102' => 'camsi', 'CSS0041261' => 'camsi', 'CSS0046246' => 'camsi', 'CSS0049256' => 'camsi', 'DCAR_004075' => 'dca', 'DCAR_011538' => 'dca', 'DCAR_019553' => 'dca', 'DCAR_020952' => 'dca', 'DCAR_021739' => 'dca', 'DCAR_027407' => 'dca', 'DCAR_027913' => 'dca', 'DCAR_028066' => 'dca', 'Dinv05899' => 'din', 'Dinv07563' => 'din', 'Dinv08010' => 'din', 'Dinv14125' => 'din', 'Dinv20172' => 'din', 'Dinv30743' => 'din', 'Dinv31229' => 'din', 'Dinv34162' => 'din', 'Dinv36028' => 'din', 'Dinv39368' => 'din', 'Dinv40565' => 'din', 'Dinv41706' => 'din', 'Duzib052G0089' => 'dzi', 'Duzib116G0641' => 'dzi', 'Duzib132G0069' => 'dzi', 'Duzib132G1219' => 'dzi', 'Duzib147G0278' => 'dzi', 'Duzib160G0480' => 'dzi', 'Duzib170G0661' => 'dzi', 'Duzib177G0591' => 'dzi', 'Duzib187G1353' => 'dzi', 'Duzib192G0858' => 'dzi', 'Duzib192G0883' => 'dzi', 'Duzib213G0506' => 'dzi', 'Duzib235G0289' => 'dzi', 'Duzib251G0422' => 'dzi', 'ECA232G3898' => 'eca', 'ECA233G5950' => 'eca', 'ECA234G1699' => 'eca', 'ECA234G2421' => 'eca', 'ECA236G0426' => 'eca', 'ECA236G4331' => 'eca', 'ECA248G2573' => 'eca', 'EL10Ac1g00077' => 'bvu', 'EL10Ac1g01746' => 'bvu', 'EL10Ac2g03464' => 'bvu', 'EL10Ac4g08176' => 'bvu', 'EL10Ac7g17521' => 'bvu', 'EL10Ac8g20386' => 'bvu', 'EL10Ac9g21343' => 'bvu', 'EL10Ac9g22688' => 'bvu', 'Eucgr.B03434' => 'egr', 'Eucgr.D00618' => 'egr', 'Eucgr.E02395' => 'egr', 'Eucgr.F01129' => 'egr', 'Eucgr.F02622' => 'egr', 'Eucgr.F04207' => 'egr', 'FAN01G0570' => 'fan', 'FAN03G3351' => 'fan', 'FAN06G3702' => 'fan', 'FAN07G2149' => 'fan', 'FAN10G3758' => 'fan', 'FAN11G1170' => 'fan', 'FAN11G2050' => 'fan', 'FAN11G2724' => 'fan', 'FAN12G1700' => 'fan', 'FAN12G2028' => 'fan', 'FAN15G1160' => 'fan', 'FAN15G3063' => 'fan', 'FAN16G2540' => 'fan', 'FAN16G3077' => 'fan', 'FAN16G3624' => 'fan', 'FAN17G0221' => 'fan', 'FAN20G2492' => 'fan', 'FAN20G2905' => 'fan', 'FAN21G0548' => 'fan', 'FAN21G1300' => 'fan', 'FAN22G0077' => 'fan', 'FAN22G1315' => 'fan', 'FAN24G1280' => 'fan', 'FAN24G1445' => 'fan', 'FAN24G3527' => 'fan', 'FAN25G0464' => 'fan', 'FAN25G2885' => 'fan', 'FAN25G3270' => 'fan', 'FAN27G1101' => 'fan', 'FAN27G2846' => 'fan', 'FAN27G3524' => 'fan', 'FvH4_2g11770' => 'fve', 'FvH4_2g15630' => 'fve', 'FvH4_3g05570' => 'fve', 'FvH4_3g09110' => 'fve', 'FvH4_3g19940' => 'fve', 'FvH4_4g04821' => 'fve', 'FvH4_4g31480' => 'fve', 'FvH4_7g01740' => 'fve', 'Glyma.05G130400' => 'gma', 'Glyma.05G156400' => 'gma', 'Glyma.07G197000' => 'gma', 'Glyma.08G085151' => 'gma', 'Glyma.08G114500' => 'gma', 'Glyma.08G300400' => 'gma', 'Glyma.10G215800' => 'gma', 'Glyma.12G224400' => 'gma', 'Glyma.13G179300' => 'gma', 'Glyma.13G218151' => 'gma', 'Glyma.13G238800' => 'gma', 'Glyma.13G276900' => 'gma', 'Glyma.14G078200' => 'gma', 'Glyma.15G074500' => 'gma', 'Glyma.15G094100' => 'gma', 'Glyma.17G247200' => 'gma', 'Glyma.18G120100' => 'gma', 'Glyma.20G176000' => 'gma', 'Gohir.A01G063600' => 'ghi', 'Gohir.A01G170301' => 'ghi', 'Gohir.A02G060500' => 'ghi', 'Gohir.A05G133850' => 'ghi', 'Gohir.A05G161400' => 'ghi', 'Gohir.A06G012900' => 'ghi', 'Gohir.A06G035901' => 'ghi', 'Gohir.A06G127100' => 'ghi', 'Gohir.A06G210500' => 'ghi', 'Gohir.A08G008650' => 'ghi', 'Gohir.A09G072700' => 'ghi', 'Gohir.A09G088301' => 'ghi', 'Gohir.A10G040600' => 'ghi', 'Gohir.A12G036300' => 'ghi', 'Gohir.A12G143350' => 'ghi', 'Gohir.A12G165500' => 'ghi', 'Gohir.A13G145700' => 'ghi', 'Gohir.D01G050000' => 'ghi', 'Gohir.D01G051366' => 'ghi', 'Gohir.D01G161350' => 'ghi', 'Gohir.D02G065900' => 'ghi', 'Gohir.D05G164200' => 'ghi', 'Gohir.D05G355500' => 'ghi', 'Gohir.D06G010400' => 'ghi', 'Gohir.D06G111250' => 'ghi', 'Gohir.D06G132000' => 'ghi', 'Gohir.D06G210500' => 'ghi', 'Gohir.D07G165675' => 'ghi', 'Gohir.D08G062240' => 'ghi', 'Gohir.D08G086101' => 'ghi', 'Gohir.D08G138060' => 'ghi', 'Gohir.D09G072300' => 'ghi', 'Gohir.D10G041400' => 'ghi', 'Gohir.D11G191020' => 'ghi', 'Gohir.D11G212066' => 'ghi', 'Gohir.D12G036300' => 'ghi', 'Gohir.D12G168600' => 'ghi', 'Gohir.D13G150600' => 'ghi', 'Gorai.001G057300' => 'gra', 'Gorai.002G069900' => 'gra', 'Gorai.002G200000' => 'gra', 'Gorai.003G067600' => 'gra', 'Gorai.005G074800' => 'gra', 'Gorai.006G087300' => 'gra', 'Gorai.008G037500' => 'gra', 'Gorai.008G181400' => 'gra', 'Gorai.009G169400' => 'gra', 'Gorai.009G387900' => 'gra', 'Gorai.010G013300' => 'gra', 'Gorai.010G153800' => 'gra', 'Gorai.010G255800' => 'gra', 'Gorai.011G043700' => 'gra', 'Gorai.011G198900' => 'gra', 'Gorai.013G168400' => 'gra', 'GSVIVG01005212001' => 'vvi', 'GSVIVG01006163001' => 'vvi', 'GSVIVG01009625001' => 'vvi', 'GSVIVG01014338001' => 'vvi', 'GSVIVG01020005001' => 'vvi', 'GSVIVG01021450001' => 'vvi', 'GSVIVG01023975001' => 'vvi', 'GSVIVG01034490001' => 'vvi', 'HanXRQChr04g0112071' => 'han', 'HanXRQChr05g0131151' => 'han', 'HanXRQChr09g0262371' => 'han', 'HanXRQChr09g0268401' => 'han', 'HanXRQChr10g0279241' => 'han', 'HanXRQChr10g0297961' => 'han', 'HanXRQChr11g0326231' => 'han', 'HanXRQChr11g0328471' => 'han', 'HanXRQChr16g0507941' => 'han', 'HanXRQChr17g0560211' => 'han', 'Haze_02108' => 'cav', 'Haze_02428' => 'cav', 'Haze_05593' => 'cav', 'Haze_06448' => 'cav', 'Haze_09427' => 'cav', 'Haze_12022' => 'cav', 'Haze_17612' => 'cav', 'Haze_17928' => 'cav', 'Hma1.2p1_0032F.1_g019250' => 'hma', 'Hma1.2p1_0163F.1_g072690' => 'hma', 'Hma1.2p1_0265F.1_g106710' => 'hma', 'Hma1.2p1_0286F.1_g113970' => 'hma', 'Hma1.2p1_0363F.1_g136640' => 'hma', 'Hma1.2p1_0584F.1_g183470' => 'hma', 'Hma1.2p1_0885F.1_g232570' => 'hma', 'HPP92_006022' => 'vpl', 'HPP92_007320' => 'vpl', 'HPP92_011521' => 'vpl', 'HPP92_019387' => 'vpl', 'HPP92_024038' => 'vpl', 'Hund05891' => 'sun', 'Hund06450' => 'sun', 'Hund12053' => 'sun', 'Hund16800' => 'sun', 'Hund21222' => 'sun', 'Hund22896' => 'sun', 'Hund23746' => 'sun', 'Hund27083' => 'sun', 'Lalb_Chr02g0141831' => 'lal', 'Lalb_Chr02g0141841' => 'lal', 'Lalb_Chr05g0220411' => 'lal', 'Lalb_Chr06g0162081' => 'lal', 'Lalb_Chr09g0327651' => 'lal', 'Lalb_Chr13g0295051' => 'lal', 'Lalb_Chr15g0086801' => 'lal', 'Lalb_Chr16g0383781' => 'lal', 'Lalb_Chr16g0383791' => 'lal', 'Lalb_Chr18g0055441' => 'lal', 'Lalb_Chr18g0059611' => 'lal', 'Lalb_Chr20g0109661' => 'lal', 'Lalb_Chr20g0109831' => 'lal', 'Lalb_Chr20g0121871' => 'lal', 'Lalb_Chr22g0355361' => 'lal', 'Lalb_Chr25g0286371' => 'lal', 'Lj1A1187G43' => 'lonja', 'Lj1A1205T50' => 'lonja', 'Lj1A800G33' => 'lonja', 'Lj1C1187T7' => 'lonja', 'Lj1C843T11' => 'lonja', 'Lj1g0010940' => 'lja', 'Lj2A288T69' => 'lonja', 'Lj3g0024276' => 'lja', 'Lj4A47T76' => 'lonja', 'Lj4g0005805' => 'lja', 'Lj4g0006097' => 'lja', 'Lj4g0008528' => 'lja', 'Lj4g0024907' => 'lja', 'Lj5g0012472' => 'lja', 'Lj5g0018648' => 'lja', 'Lj6C789G1' => 'lonja', 'Lj6g0004000' => 'lja', 'Lj7A292G67' => 'lonja', 'Lj7A292T64' => 'lonja', 'Lj9A400T58' => 'lonja', 'Lsat_1_v5_gn_1_126181' => 'lsa', 'Lsat_1_v5_gn_4_123041' => 'lsa', 'Lsat_1_v5_gn_4_133620' => 'lsa', 'Lsat_1_v5_gn_4_53221' => 'lsa', 'Lsat_1_v5_gn_4_71961' => 'lsa', 'Lsat_1_v5_gn_7_105241' => 'lsa', 'Lsat_1_v5_gn_7_21361' => 'lsa', 'Lsat_1_v5_gn_7_28860' => 'lsa', 'Lsat_1_v5_gn_7_31260' => 'lsa', 'Lsat_1_v5_gn_8_52801' => 'lsa', 'Manes.02G191400' => 'mes', 'Manes.03G110100' => 'mes', 'Manes.04G071100' => 'mes', 'Manes.05G100500' => 'mes', 'Manes.05G164700' => 'mes', 'Manes.15G087000' => 'mes', 'Manes.15G121500' => 'mes', 'Manes.16G028300' => 'mes', 'Manes.17G046100' => 'mes', 'Manes.17G069800' => 'mes', 'Manes.18G100500' => 'mes', 'Mapoly0002s0109' => 'mpo', 'Mapoly0024s0007' => 'mpo', 'Mapoly0089s0032' => 'mpo', 'MBI04_g42241_MAGBIO' => 'mbi', 'MBI05_g11988_MAGBIO' => 'mbi', 'MBI05_g35452_MAGBIO' => 'mbi', 'MBI07_g30179_MAGBIO' => 'mbi', 'MBI07_g35859_MAGBIO' => 'mbi', 'MBI07_g35860_MAGBIO' => 'mbi', 'MBI07_g37166_MAGBIO' => 'mbi', 'MBI08_g18172_MAGBIO' => 'mbi', 'MBI09_g08441_MAGBIO' => 'mbi', 'MBI13_g01676_MAGBIO' => 'mbi', 'MBI14_g42955_MAGBIO' => 'mbi', 'MBI16_g13161_MAGBIO' => 'mbi', 'MBI17_g27204_MAGBIO' => 'mbi', 'MBI19_g21595_MAGBIO' => 'mbi', 'MD00G1148400' => 'mdo', 'MD02G1301200' => 'mdo', 'MD03G1227800' => 'mdo', 'MD05G1041100' => 'mdo', 'MD05G1124800' => 'mdo', 'MD05G1284000' => 'mdo', 'MD05G1338800' => 'mdo', 'MD05G1338900' => 'mdo', 'MD07G1022800' => 'mdo', 'MD10G1047500' => 'mdo', 'MD10G1127500' => 'mdo', 'MD10G1262300' => 'mdo', 'MD10G1293800' => 'mdo', 'MD16G1074300' => 'mdo', 'Medtr1g021670' => 'mtr', 'Medtr1g096320' => 'mtr', 'Medtr2g013690' => 'mtr', 'Medtr2g019450' => 'mtr', 'Medtr2g085170' => 'mtr', 'Medtr4g088785' => 'mtr', 'Medtr8g055930' => 'mtr', 'Medtr8g085850' => 'mtr', 'MELO3C002605.2' => 'cme', 'MELO3C003891.2' => 'cme', 'MELO3C004012.2' => 'cme', 'MELO3C007134.2' => 'cme', 'MELO3C008118.2' => 'cme', 'MELO3C016700.2' => 'cme', 'MELO3C024127.2' => 'cme', 'MELO3C033361.2' => 'cme', 'MELO3C033362.2' => 'cme', 'Migut.C00430' => 'egut', 'Migut.C01246' => 'egut', 'Migut.E00101' => 'egut', 'Migut.H01486' => 'egut', 'Migut.H01939' => 'egut', 'Migut.K00360' => 'egut', 'Migut.M00910' => 'egut', 'Migut.M01139' => 'egut', 'Migut.N02677' => 'egut', 'MSTRG.13252' => 'ama', 'MSTRG.14701' => 'ama', 'MSTRG.1521' => 'ama', 'MSTRG.15884' => 'ama', 'MSTRG.16242' => 'ama', 'MSTRG.22285' => 'ama', 'MSTRG.22444' => 'ama', 'MSTRG.2349' => 'ama', 'MSTRG.26308' => 'ama', 'MSTRG.28296' => 'ama', 'MSTRG.9895' => 'ama', 'Nitab4.5_0000110g0060' => 'nta', 'Nitab4.5_0000420g0130' => 'nta', 'Nitab4.5_0000422g0030' => 'nta', 'Nitab4.5_0000560g0180' => 'nta', 'Nitab4.5_0000703g0100' => 'nta', 'Nitab4.5_0000786g0200' => 'nta', 'Nitab4.5_0001336g0020' => 'nta', 'Nitab4.5_0001796g0030' => 'nta', 'Nitab4.5_0003348g0060' => 'nta', 'Nitab4.5_0003698g0040' => 'nta', 'Nitab4.5_0003942g0090' => 'nta', 'Nitab4.5_0004775g0070' => 'nta', 'Nitab4.5_0004864g0030' => 'nta', 'Nitab4.5_0005615g0020' => 'nta', 'Nitab4.5_0009288g0030' => 'nta', 'Nitab4.5_0009341g0010' => 'nta', 'Nitab4.5_0009535g0010' => 'nta', 'Nn1g03995' => 'nnu', 'Nn1g04100' => 'nnu', 'Nn1g06530' => 'nnu', 'Nn3g16404' => 'nnu', 'Nn3g17212' => 'nnu', 'Nn3g20776' => 'nnu', 'Nn3g21923' => 'nnu', 'Nn5g27737' => 'nnu', 'Nn5g29461' => 'nnu', 'Nn7g38355' => 'nnu', 'Nn8g39873' => 'nnu', 'Oeu000548.2' => 'oeu', 'Oeu004672.1' => 'oeu', 'Oeu015605.2' => 'oeu', 'Oeu016092.1' => 'oeu', 'Oeu017879.3' => 'oeu', 'Oeu024910.1' => 'oeu', 'Oeu028965.1' => 'oeu', 'Oeu031269.1' => 'oeu', 'Oeu031270.1' => 'oeu', 'Oeu032535.1' => 'oeu', 'Oeu034151.1' => 'oeu', 'Oeu034152.1' => 'oeu', 'Oeu034588.2' => 'oeu', 'Oeu050846.1' => 'oeu', 'Oeu050849.2' => 'oeu', 'Oeu051063.2' => 'oeu', 'Oeu052368.1' => 'oeu', 'Oeu052370.1' => 'oeu', 'Os01g0210400' => 'osa', 'Os01g0304300' => 'osa', 'Os01g0749100' => 'osa', 'Os02g0745800' => 'osa', 'Os03g0769050' => 'osa', 'Os05g0531500' => 'osa', 'Os06g0724300' => 'osa', 'Os11g0198100' => 'osa', 'Peaxi162Scf00069g01425' => 'pax', 'Peaxi162Scf00280g00811' => 'pax', 'Peaxi162Scf00310g00615' => 'pax', 'Peaxi162Scf00362g00542' => 'pax', 'Peaxi162Scf00461g00310' => 'pax', 'Peaxi162Scf00530g00118' => 'pax', 'Peaxi162Scf00541g00057' => 'pax', 'Peaxi162Scf00661g00017' => 'pax', 'Peaxi162Scf00926g00027' => 'pax', 'Peaxi162Scf01064g00263' => 'pax', 'Peaxi162Scf01211g00135' => 'pax', 'PGR004G2336' => 'pgr', 'PGR042G0327' => 'pgr', 'PGR042G1957' => 'pgr', 'PGR042G2003' => 'pgr', 'PGR042G3929' => 'pgr', 'PGR083G1137' => 'pgr', 'PGR083G1364' => 'pgr', 'PGSC0003DMG400003381' => 'stu', 'PGSC0003DMG400003417' => 'stu', 'PGSC0003DMG400008981' => 'stu', 'PGSC0003DMG400012417' => 'stu', 'PGSC0003DMG400012823' => 'stu', 'PGSC0003DMG400016885' => 'stu', 'PGSC0003DMG400022812' => 'stu', 'PGSC0003DMG400029726' => 'stu', 'PGSC0003DMG401009243' => 'stu', 'PGSC0003DMG401031505' => 'stu', 'PGSC0003DMG402031505' => 'stu', 'Phvul.001G017600' => 'pvu', 'Phvul.002G193500' => 'pvu', 'Phvul.002G228900' => 'pvu', 'Phvul.002G236800' => 'pvu', 'Phvul.003G049500' => 'pvu', 'Phvul.005G072000' => 'pvu', 'Phvul.006G164800' => 'pvu', 'Phvul.006G185100' => 'pvu', 'Phvul.007G090000' => 'pvu', 'Potri.001G399800' => 'ptr', 'Potri.002G149900' => 'ptr', 'Potri.004G044100' => 'ptr', 'Potri.004G177600' => 'ptr', 'Potri.009G138000' => 'ptr', 'Potri.010G094000' => 'ptr', 'Potri.011G053000' => 'ptr', 'Potri.011G119300' => 'ptr', 'Potri.013G113700' => 'ptr', 'Potri.018G107800' => 'ptr', 'Potri.019G084100' => 'ptr', 'Pp3c14_23720' => 'ppa', 'Pp3c16_6340' => 'ppa', 'Pp3c23_13420' => 'ppa', 'Pp3c24_2740' => 'ppa', 'Pp3c25_860' => 'ppa', 'Pp3c8_21750' => 'ppa', 'Prupe.1G273000' => 'ppe', 'Prupe.1G273700' => 'ppe', 'Prupe.1G274100' => 'ppe', 'Prupe.2G023300' => 'ppe', 'Prupe.4G048000' => 'ppe', 'Prupe.4G080400' => 'ppe', 'Prupe.4G181200' => 'ppe', 'Prupe.8G056900' => 'ppe', 'Prupe.8G168700' => 'ppe', 'Psat1g189080' => 'psa', 'Psat1g204760' => 'psa', 'Psat4g175560' => 'psa', 'Psat4g177720' => 'psa', 'Psat5g244240' => 'psa', 'Psat6g010720' => 'psa', 'Psat6g187200' => 'psa', 'Psat7g072040' => 'psa', 'PSO017G3501' => 'pso', 'PSO063G2148' => 'pso', 'PSO063G5608' => 'pso', 'PSO210G6392' => 'pso', 'PSO541G2319' => 'pso', 'PSO541G2836' => 'pso', 'PSO541G4012' => 'pso', 'PSO541G6253' => 'pso', 'PSO675G0580' => 'pso', 'PSO675G0856' => 'pso', 'PSO675G5635' => 'pso', 'PSO675G9157' => 'pso', 'PSO832G1660' => 'pso', 'PSO832G1969' => 'pso', 'QL02p007186' => 'qlo', 'QL02p033904' => 'qlo', 'QL03p064391' => 'qlo', 'QL05p040593' => 'qlo', 'QL05p058242' => 'qlo', 'QL08p021825' => 'qlo', 'QL11p004981' => 'qlo', 'RcHm_v2.0_Chr1g0318301' => 'rch', 'RcHm_v2.0_Chr4g0418501' => 'rch', 'RcHm_v2.0_Chr4g0439971' => 'rch', 'RcHm_v2.0_Chr5g0008541' => 'rch', 'RcHm_v2.0_Chr5g0014101' => 'rch', 'RcHm_v2.0_Chr5g0014131' => 'rch', 'RcHm_v2.0_Chr5g0033621' => 'rch', 'RcHm_v2.0_Chr6g0272041' => 'rch', 'RcHm_v2.0_Chr6g0278831' => 'rch', 'Rhsim02G0130400' => 'rsi', 'Rhsim02G0171100' => 'rsi', 'Rhsim05G0053000' => 'rsi', 'Rhsim05G0053100' => 'rsi', 'Rhsim06G0096500' => 'rsi', 'Rhsim06G0096600' => 'rsi', 'Rhsim06G0199100' => 'rsi', 'Rhsim12G0062300' => 'rsi', 'Rhsim12G0062800' => 'rsi', 'Sabra02G0118600' => 'sbr', 'Sabra04G0027300' => 'sbr', 'Sabra04G0119500' => 'sbr', 'Sabra08G0112500' => 'sbr', 'Sabra11G0036800' => 'sbr', 'Sabra11G0103800' => 'sbr', 'Sabra13G0096300' => 'sbr', 'Sabra16G0262300' => 'sbr', 'Sabra18G0091700' => 'sbr', 'Sabra19G0095400' => 'sbr', 'SalBow6G3080' => 'sbo', 'SalBow7G1157' => 'sbo', 'SalBow7G2123' => 'sbo', 'SalBow7G2285' => 'sbo', 'SalBow7G3537' => 'sbo', 'SalBow8G2947' => 'sbo', 'SalBow8G4463' => 'sbo', 'SalBow8G5466' => 'sbo', 'Sc01g0001750' => 'sci', 'Sc02g0006640' => 'sci', 'Sc02g0006670' => 'sci', 'Sc04g0008220' => 'sci', 'Sc05g0006190' => 'sci', 'Sc08g0002760' => 'sci', 'Sc17g0006170' => 'sci', 'Sc22g0002050' => 'sci', 'Sc23g0001190' => 'sci', 'Sc24g0000980' => 'sci', 'Sed0006245' => 'sed', 'Sed0007543' => 'sed', 'Sed0009411' => 'sed', 'Sed0010765' => 'sed', 'Sed0012944' => 'sed', 'Sed0014682' => 'sed', 'Sed0016174' => 'sed', 'Sed0016796' => 'sed', 'Sed0020317' => 'sed', 'Sed0021467' => 'sed', 'SEGI_01316' => 'sgi', 'SEGI_03374' => 'sgi', 'SEGI_16265' => 'sgi', 'SEGI_18569' => 'sgi', 'SEGI_20351' => 'sgi', 'SEGI_26395' => 'sgi', 'SEGI_29469' => 'sgi', 'SEGI_34771' => 'sgi', 'SEGI_36769' => 'sgi', 'SEGI_37139' => 'sgi', 'SGA_v2.0_scaffold100G29687' => 'sas', 'SGA_v2.0_scaffold118G32472' => 'sas', 'SGA_v2.0_scaffold14G07051' => 'sas', 'SGA_v2.0_scaffold183G39845' => 'sas', 'SGA_v2.0_scaffold1G00174' => 'sas', 'SGA_v2.0_scaffold22G09714' => 'sas', 'SGA_v2.0_scaffold333G48992' => 'sas', 'SGA_v2.0_scaffold46G17491' => 'sas', 'SGA_v2.0_scaffold49G18294' => 'sas', 'SGA_v2.0_scaffold63G21658' => 'sas', 'SHI01741' => 'shi', 'SHI05771' => 'shi', 'SHI18077' => 'shi', 'SHI20525' => 'shi', 'SHI20527' => 'shi', 'SHI20528' => 'shi', 'SMO172G0185' => 'smo', 'SMO198G0020' => 'smo', 'SMO351G0006' => 'smo', 'SMO356G0118' => 'smo', 'SMO358G0296' => 'smo', 'SMO367G0079' => 'smo', 'SMO367G1277' => 'smo', 'Solyc01g014220.3' => 'sly', 'Solyc01g111770.2' => 'sly', 'Solyc02g078180.3' => 'sly', 'Solyc03g006430.3' => 'sly', 'Solyc03g006456.1' => 'sly', 'Solyc03g079860.2' => 'sly', 'Solyc04g079770.3' => 'sly', 'Solyc05g007430.4' => 'sly', 'Solyc07g063150.3' => 'sly', 'Solyc08g016620.3' => 'sly', 'Solyc09g057590.3' => 'sly', 'Solyc09g057600.1' => 'sly', 'Solyc10g009050.3' => 'sly', 'Solyc11g017420.2' => 'sly', 'Sopen01g053810' => 'spe', 'Sopen02g023040' => 'spe', 'Sopen03g002440' => 'spe', 'Sopen04g033350' => 'spe', 'Sopen05g003310' => 'spe', 'Sopen07g004050' => 'spe', 'Sopen07g031340' => 'spe', 'Sopen08g006990' => 'spe', 'Sopen10g004830' => 'spe', 'Sopen11g009370' => 'spe', 'Sp1g24450' => 'spa', 'Sp1g29670' => 'spa', 'Sp1g39600' => 'spa', 'Sp2g11080' => 'spa', 'Sp2g13970' => 'spa', 'Sp4g16130' => 'spa', 'Sp6g13080' => 'spa', 'Sp7g37270' => 'spa', 'TAR371G0065' => 'tar', 'TAR376G0340' => 'tar', 'TAR376G0435' => 'tar', 'TAR381G0002' => 'tar', 'TAR381G1236' => 'tar', 'TAR624G0055' => 'tar', 'TAR624G0324' => 'tar', 'TAR624G0696' => 'tar', 'TAR624G0906' => 'tar', 'TAR625G0107' => 'tar', 'TAR626G0015' => 'tar', 'TAR626G1356' => 'tar', 'TAR627G0888' => 'tar', 'TAR628G0399' => 'tar', 'TAR628G1327' => 'tar', 'TAR629G2831' => 'tar', 'TAR629G2874' => 'tar', 'TAR633G1432' => 'tar', 'TAR633G2771' => 'tar', 'THA.LOC104803394' => 'tha', 'THA.LOC104805153' => 'tha', 'THA.LOC104806784' => 'tha', 'THA.LOC104810473' => 'tha', 'THA.LOC104813100' => 'tha', 'THA.LOC104814215' => 'tha', 'THA.LOC104815554' => 'tha', 'THA.LOC104820544' => 'tha', 'THA.LOC104824754' => 'tha', 'THA.LOC104827717' => 'tha', 'Thecc.02G031400' => 'tca', 'Thecc.02G055900' => 'tca', 'Thecc.02G350800' => 'tca', 'Thecc.06G150900' => 'tca', 'Thecc.06G186600' => 'tca', 'Thecc.07G089600' => 'tca', 'Thecc.08G020400' => 'tca', 'Thecc.08G182100' => 'tca', 'Thhalv10000873m.g' => 'esa', 'Thhalv10004185m.g' => 'esa', 'Thhalv10006981m.g' => 'esa', 'Thhalv10007204m.g' => 'esa', 'Thhalv10011374m.g' => 'esa', 'Thhalv10013482m.g' => 'esa', 'Thhalv10017801m.g' => 'esa', 'Thhalv10024983m.g' => 'esa', 'TPR.G12072' => 'tpr', 'TPR.G15769' => 'tpr', 'TPR.G16504' => 'tpr', 'TPR.G16506' => 'tpr', 'TPR.G24345' => 'tpr', 'TPR.G26666' => 'tpr', 'TPR.G27320' => 'tpr', 'TPR.G31819' => 'tpr', 'TPR.G38879' => 'tpr', 'TPR.G39015' => 'tpr', 'TPR.G8819' => 'tpr', 'TWI09G0924' => 'twi', 'TWI12G0811' => 'twi', 'TWI12G1294' => 'twi', 'TWI31G0150' => 'twi', 'TWI36G1262' => 'twi', 'TWI38G1287' => 'twi', 'TWI38G1633' => 'twi', 'TWI38G1982' => 'twi', 'TWI39G0116' => 'twi', 'TWI60G1011' => 'twi', 'TWI63G0171' => 'twi', 'TWI73G0839' => 'twi', 'TWI79G1511' => 'twi', 'unitig_0.g915' => 'ugi', 'unitig_0.g916' => 'ugi', 'unitig_21.g20219' => 'ugi', 'unitig_21.g20416' => 'ugi', 'unitig_578.g16132' => 'ugi', 'unitig_578.g16718' => 'ugi', 'unitig_62.g23481' => 'ugi', 'unitig_744.g24535' => 'ugi', 'unitig_749.g13525' => 'ugi', 'vmacro01248' => 'vma', 'vmacro02290' => 'vma', 'vmacro10946' => 'vma', 'vmacro11865' => 'vma', 'vmacro12493' => 'vma', 'vmacro17322' => 'vma', 'vmacro21599' => 'vma', 'vmacro23041' => 'vma', 'VMungo0251G0004' => 'vmu', 'VMungo0251G2639' => 'vmu', 'VMungo0251G2967' => 'vmu', 'VMungo0540G0864' => 'vmu', 'VMungo0540G1569' => 'vmu', 'VMungo0647G0317' => 'vmu', 'VMungo0720G1373' => 'vmu', 'VMungo0720G1508' => 'vmu', 'VMungo1080G0485' => 'vmu', 'VMungo1215G3177' => 'vmu', 'Zm00001eb112600' => 'zma', 'Zm00001eb120220' => 'zma', 'Zm00001eb153240' => 'zma', 'Zm00001eb168880' => 'zma', 'Zm00001eb213920' => 'zma', 'Zm00001eb228280' => 'zma', 'Zm00001eb254580' => 'zma', 'Zm00001eb272180' => 'zma', 'Zm00001eb293190' => 'zma', 'Zm00001eb322930' => 'zma', 'Zm00001eb353360' => 'zma', 'Zm00001eb353390' => 'zma', 'Zm00001eb353430' => 'zma', 'Zm00001eb353440' => 'zma', 'Zm00001eb353780' => 'zma' ) $gf_id = 'HOM05D000499' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000499' ) $data_identifier = 'HOM05D000499' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 29, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 12, 'amhyb' => (int) 8, 'aly' => (int) 12, 'aox' => (int) 9, 'arhy' => (int) 26, 'ath' => (int) 8, 'atr' => (int) 7, 'acertr' => (int) 10, 'cqu' => (int) 15, 'bca' => (int) 29, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 11, 'cansat' => (int) 8, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 9, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 8, 'cpa' => (int) 10, 'csa' => (int) 7, 'camsi' => (int) 20, 'dca' => (int) 8, 'din' => (int) 12, 'dzi' => (int) 14, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 6, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 38, 'gra' => (int) 16, 'vvi' => (int) 8, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 5, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 11, 'lja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 11, 'mpo' => (int) 3, 'mbi' => (int) 14, 'mdo' => (int) 14, 'mtr' => (int) 8, 'cme' => (int) 9, 'egut' => (int) 9, 'ama' => (int) 11, 'nta' => (int) 17, 'nnu' => (int) 11, 'oeu' => (int) 18, 'osa' => (int) 8, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 6, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 9, 'rsi' => (int) 9, 'sbr' => (int) 10, 'sbo' => (int) 8, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 10, 'sas' => (int) 10, 'shi' => (int) 6, 'smo' => (int) 7, 'sly' => (int) 14, 'spe' => (int) 10, 'spa' => (int) 8, 'tar' => (int) 19, 'tha' => (int) 10, 'tca' => (int) 8, 'esa' => (int) 8, 'tpr' => (int) 11, 'twi' => (int) 13, 'ugi' => (int) 9, 'vma' => (int) 8, 'vmu' => (int) 10, 'zma' => (int) 15 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb353780' $species_info = array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ) $local_species = 'fan' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000499', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1066', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p29780' => 'bna', 'A02p33180' => 'bna', 'A03p16470' => 'bna', 'A03p66010' => 'bna', 'A04p25970' => 'bna', 'A06p01270' => 'bna', 'A06p46080' => 'bna', 'A07p11400' => 'bna', 'A08p01840' => 'bna', 'A08p08230' => 'bna', 'A08p25740' => 'bna', 'A09p32070' => 'bna', 'A09p37830' => 'bna', 'A09p42840' => 'bna', 'A09p42850' => 'bna', 'Aa31LG10G2060' => 'aar', 'Aa31LG2G7410' => 'aar', 'Aa31LG6G10200' => 'aar', 'Aa31LG6G16680' => 'aar', 'Aa31LG6G8470' => 'aar', 'Aa31LG9G12730' => 'aar', 'Aa31LG9G13680' => 'aar', 'Aa31LG9G14920' => 'aar', 'Aa31LG9G6650' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4977' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5467' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3254' => 'aag', 'Actinidia02578' => 'ach', 'Actinidia07693' => 'ach', 'Actinidia08413' => 'ach', 'Actinidia08414' => 'ach', 'Actinidia15289' => 'ach', 'Actinidia19871' => 'ach', 'Actinidia21475' => 'ach', 'Actinidia22576' => 'ach', 'Actinidia28327' => 'ach', 'Actinidia32491' => 'ach', 'Actinidia39463' => 'ach', 'Actinidia39571' => 'ach', 'Ah.01g013750' => 'amhyb', 'Ah.01g023210' => 'amhyb', 'Ah.04g164850' => 'amhyb', 'Ah.05g178060' => 'amhyb', 'Ah.07g204270' => 'amhyb', 'Ah.07g208480' => 'amhyb', 'Ah.09g237410' => 'amhyb', 'Ah.14g089460' => 'amhyb', 'AL1G41790' => 'aly', 'AL1G49050' => 'aly', 'AL1G53810' => 'aly', 'AL1G61400' => 'aly', 'AL4G18580' => 'aly', 'AL5G12510' => 'aly', 'AL5G12540' => 'aly', 'AL6G43230' => 'aly', 'AL7G10370' => 'aly', 'AL7G19250' => 'aly', 'AL8G12240' => 'aly', 'AL8G18540' => 'aly', 'Aqoxy1G02409' => 'aox', 'Aqoxy2G03993' => 'aox', 'Aqoxy3G03357' => 'aox', 'Aqoxy4G00785' => 'aox', 'Aqoxy5G02598' => 'aox', 'Aqoxy6G00132' => 'aox', 'Aqoxy7G01776' => 'aox', 'Aqoxy7G02316' => 'aox', 'Aqoxy7G03973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.12AFKW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B8730' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27IQR1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3F75VG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3RE0GA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41TCQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.527VTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FIR39' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5W8UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DA38EV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ63HS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H1I32C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HC27T5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4M8AP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7N3CZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9UVDZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LS1NQA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT1D4B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SKC4TM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCFV76' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF9Q1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQWD9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1ZM88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WE07RT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YCK7VH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJE6Q6' => 'arhy', 'AT1G28240' => 'ath', 'AT1G34550' => 'ath', 'AT1G53040' => 'ath', 'AT2G02910' => 'ath', 'AT4G09630' => 'ath', 'AT4G38500' => 'ath', 'AT5G42660' => 'ath', 'AT5G46220' => 'ath', 'ATR0152G026' => 'atr', 'ATR0564G343' => 'atr', 'ATR0706G151' => 'atr', 'ATR0733G207' => 'atr', 'ATR0751G234' => 'atr', 'ATR0807G048' => 'atr', 'ATR1091G084' => 'atr', 'Atru.chr10.1229' => 'acertr', 'Atru.chr10.1230' => 'acertr', 'Atru.chr10.1874' => 'acertr', 'Atru.chr11.1808' => 'acertr', 'Atru.chr13.1795' => 'acertr', 'Atru.chr13.570' => 'acertr', 'Atru.chr2.2608' => 'acertr', 'Atru.chr2.2609' => 'acertr', 'Atru.chr5.3428' => 'acertr', 'Atru.chr8.1171' => 'acertr', 'AUR62004651' => 'cqu', 'AUR62008675' => 'cqu', 'AUR62010014' => 'cqu', 'AUR62013004' => 'cqu', 'AUR62014825' => 'cqu', 'AUR62015015' => 'cqu', 'AUR62015151' => 'cqu', 'AUR62017020' => 'cqu', 'AUR62019422' => 'cqu', 'AUR62023570' => 'cqu', 'AUR62025571' => 'cqu', 'AUR62029098' => 'cqu', 'AUR62033863' => 'cqu', 'AUR62034296' => 'cqu', 'AUR62040075' => 'cqu', 'BcaB02g07334' => 'bca', 'BcaB02g10575' => 'bca', 'BcaB03g12119' => 'bca', 'BcaB03g12120' => 'bca', 'BcaB03g13945' => 'bca', 'BcaB04g17123' => 'bca', 'BcaB04g17867' => 'bca', 'BcaB04g19839' => 'bca', 'BcaB07g30317' => 'bca', 'BcaB07g32432' => 'bca', 'BcaB07g33362' => 'bca', 'BcaB08g36611' => 'bca', 'BcaC01g00028' => 'bca', 'BcaC01g01356' => 'bca', 'BcaC01g02034' => 'bca', 'BcaC01g06051' => 'bca', 'BcaC03g16839' => 'bca', 'BcaC03g17176' => 'bca', 'BcaC05g26829' => 'bca', 'BcaC06g31490' => 'bca', 'BcaC06g35344' => 'bca', 'BcaC06g36570' => 'bca', 'BcaC07g37537' => 'bca', 'BcaC08g43491' => 'bca', 'BcaC08g43773' => 'bca', 'BcaNung00234' => 'bca', 'BcaNung01982' => 'bca', 'BcaNung03707' => 'bca', 'BcaNung06454' => 'bca', 'BolC2t10762H' => 'bol', 'BolC2t11191H' => 'bol', 'BolC3t14322H' => 'bol', 'BolC3t19747H' => 'bol', 'BolC3t21425H' => 'bol', 'BolC4t27800H' => 'bol', 'BolC5t31423H' => 'bol', 'BolC6t35951H' => 'bol', 'BolC6t36282H' => 'bol', 'BolC7t40678H' => 'bol', 'BolC7t40679H' => 'bol', 'BolC7t42222H' => 'bol', 'BolC7t43492H' => 'bol', 'BolC7t46785H' => 'bol', 'BolC8t47853H' => 'bol', 'BolC9t56805H' => 'bol', 'BraA02t08000Z' => 'bra', 'BraA02t08341Z' => 'bra', 'BraA03t10936Z' => 'bra', 'BraA03t15657Z' => 'bra', 'BraA04t18100Z' => 'bra', 'BraA05t20523Z' => 'bra', 'BraA06t23353Z' => 'bra', 'BraA06t27473Z' => 'bra', 'BraA06t27769Z' => 'bra', 'BraA07t28928Z' => 'bra', 'BraA08t32236Z' => 'bra', 'BraA08t32841Z' => 'bra', 'BraA08t34524Z' => 'bra', 'BraA09t38742Z' => 'bra', 'BraA09t39295Z' => 'bra', 'C02p47180' => 'bna', 'C02p50990' => 'bna', 'C03p19360' => 'bna', 'C03p74950' => 'bna', 'C03p91000' => 'bna', 'C04p63260' => 'bna', 'C05p27050' => 'bna', 'C06p08750' => 'bna', 'C06p11490' => 'bna', 'C07p02820' => 'bna', 'C07p17180' => 'bna', 'C07p29440' => 'bna', 'C07p63730' => 'bna', 'C09p39260' => 'bna', 'CAN.G1164.34' => 'can', 'CAN.G1164.39' => 'can', 'CAN.G1530.3' => 'can', 'CAN.G162.61' => 'can', 'CAN.G176.6' => 'can', 'CAN.G289.49' => 'can', 'CAN.G370.21' => 'can', 'CAN.G370.22' => 'can', 'CAN.G371.117' => 'can', 'CAN.G58.37' => 'can', 'CAN.G588.98' => 'can', 'CANSAT21G2266' => 'cansat', 'CANSAT25G2799' => 'cansat', 'CANSAT35G0862' => 'cansat', 'CANSAT35G1704' => 'cansat', 'CANSAT35G1760' => 'cansat', 'CANSAT56G3971' => 'cansat', 'CANSAT56G4116' => 'cansat', 'CANSAT80G1259' => 'cansat', 'CARHR027730' => 'chi', 'CARHR033880' => 'chi', 'CARHR043270' => 'chi', 'CARHR145330' => 'chi', 'CARHR145340' => 'chi', 'CARHR175570' => 'chi', 'CARHR181570' => 'chi', 'CARHR258470' => 'chi', 'CARHR260490' => 'chi', 'CARHR294220' => 'chi', 'Carub.0001s2668' => 'cru', 'Carub.0001s3257' => 'cru', 'Carub.0001s4220' => 'cru', 'Carub.0005s0179' => 'cru', 'Carub.0006s2807' => 'cru', 'Carub.0007s0039' => 'cru', 'Carub.0008s0169' => 'cru', 'Carub.0008s0636' => 'cru', 'Ca_00338_v3' => 'car', 'Ca_00542_v3' => 'car', 'Ca_01844_v3' => 'car', 'Ca_10611_v3' => 'car', 'Ca_13326_v3' => 'car', 'Ca_17944_v3' => 'car', 'Ca_18546_v3' => 'car', 'Ca_24219_v3' => 'car', 'Ca_29972_v3' => 'car', 'CBR_g3681' => 'cbr', 'CBR_g40021' => 'cbr', 'Cc01_g08140' => 'ccan', 'Cc02_g13410' => 'ccan', 'Cc02_g37480' => 'ccan', 'Cc05_g12030' => 'ccan', 'Cc09_g03370' => 'ccan', 'Cc09_g10300' => 'ccan', 'Cc10_g03530' => 'ccan', 'Cc10_g11380' => 'ccan', 'CDE01G0176' => 'cde', 'CDE02G0675' => 'cde', 'CDE02G0942' => 'cde', 'CDE02G1153' => 'cde', 'CDE02G4177' => 'cde', 'CDE04G2117' => 'cde', 'CDE04G2736' => 'cde', 'CDE08G1161' => 'cde', 'CDE09G1238' => 'cde', 'Cfa000467' => 'cfa', 'Cfa000947' => 'cfa', 'Cfa004969' => 'cfa', 'Cfa005284' => 'cfa', 'Cfa008993' => 'cfa', 'Cfa018187' => 'cfa', 'Cfa018454' => 'cfa', 'Cfa020585' => 'cfa', 'Ciclev10000424m.g' => 'ccl', 'Ciclev10003605m.g' => 'ccl', 'Ciclev10007828m.g' => 'ccl', 'Ciclev10014620m.g' => 'ccl', 'Ciclev10015169m.g' => 'ccl', 'Ciclev10018291m.g' => 'ccl', 'Ciclev10028256m.g' => 'ccl', 'Ciclev10033822m.g' => 'ccl', 'CiPaw.05G060300' => 'cil', 'CiPaw.05G085000' => 'cil', 'CiPaw.06G083700' => 'cil', 'CiPaw.06G120300' => 'cil', 'CiPaw.09G060500' => 'cil', 'CiPaw.09G123800' => 'cil', 'CiPaw.11G169700' => 'cil', 'CiPaw.12G118300' => 'cil', 'CiPaw.15G071000' => 'cil', 'CiPaw.15G081900' => 'cil', 'ClCG01G024610' => 'cla', 'ClCG03G006070' => 'cla', 'ClCG05G019250' => 'cla', 'ClCG09G009500' => 'cla', 'ClCG11G008200' => 'cla', 'ClCG11G018080' => 'cla', 'COL.COLO4_17373' => 'col', 'COL.COLO4_22994' => 'col', 'COL.COLO4_26389' => 'col', 'COL.COLO4_27170' => 'col', 'COL.COLO4_31074' => 'col', 'COL.COLO4_31465' => 'col', 'COL.COLO4_36438' => 'col', 'COL.COLO4_36439' => 'col', 'Cpa.g.c38781' => 'cpa', 'Cpa.g.sc128.12' => 'cpa', 'Cpa.g.sc166.7' => 'cpa', 'Cpa.g.sc166.8' => 'cpa', 'Cpa.g.sc20.111' => 'cpa', 'Cpa.g.sc27.31' => 'cpa', 'Cpa.g.sc64.36' => 'cpa', 'Cpa.g.sc64.37' => 'cpa', 'Cpa.g.sc66.49' => 'cpa', 'Cpa.g.sc80.64' => 'cpa', 'CsaV3_1G012320' => 'csa', 'CsaV3_2G008480' => 'csa', 'CsaV3_2G033450' => 'csa', 'CsaV3_3G044830' => 'csa', 'CsaV3_4G033710' => 'csa', 'CsaV3_6G051730' => 'csa', 'CsaV3_7G025350' => 'csa', 'CSS0001067' => 'camsi', 'CSS0005996' => 'camsi', 'CSS0006590' => 'camsi', 'CSS0009673' => 'camsi', 'CSS0010201' => 'camsi', 'CSS0010549' => 'camsi', 'CSS0011364' => 'camsi', 'CSS0014473' => 'camsi', 'CSS0014961' => 'camsi', 'CSS0020191' => 'camsi', 'CSS0021165' => 'camsi', 'CSS0022306' => 'camsi', 'CSS0030591' => 'camsi', 'CSS0030696' => 'camsi', 'CSS0032653' => 'camsi', 'CSS0037487' => 'camsi', 'CSS0041102' => 'camsi', 'CSS0041261' => 'camsi', 'CSS0046246' => 'camsi', 'CSS0049256' => 'camsi', 'DCAR_004075' => 'dca', 'DCAR_011538' => 'dca', 'DCAR_019553' => 'dca', 'DCAR_020952' => 'dca', 'DCAR_021739' => 'dca', 'DCAR_027407' => 'dca', 'DCAR_027913' => 'dca', 'DCAR_028066' => 'dca', 'Dinv05899' => 'din', 'Dinv07563' => 'din', 'Dinv08010' => 'din', 'Dinv14125' => 'din', 'Dinv20172' => 'din', 'Dinv30743' => 'din', 'Dinv31229' => 'din', 'Dinv34162' => 'din', 'Dinv36028' => 'din', 'Dinv39368' => 'din', 'Dinv40565' => 'din', 'Dinv41706' => 'din', 'Duzib052G0089' => 'dzi', 'Duzib116G0641' => 'dzi', 'Duzib132G0069' => 'dzi', 'Duzib132G1219' => 'dzi', 'Duzib147G0278' => 'dzi', 'Duzib160G0480' => 'dzi', 'Duzib170G0661' => 'dzi', 'Duzib177G0591' => 'dzi', 'Duzib187G1353' => 'dzi', 'Duzib192G0858' => 'dzi', 'Duzib192G0883' => 'dzi', 'Duzib213G0506' => 'dzi', 'Duzib235G0289' => 'dzi', 'Duzib251G0422' => 'dzi', 'ECA232G3898' => 'eca', 'ECA233G5950' => 'eca', 'ECA234G1699' => 'eca', 'ECA234G2421' => 'eca', 'ECA236G0426' => 'eca', 'ECA236G4331' => 'eca', 'ECA248G2573' => 'eca', 'EL10Ac1g00077' => 'bvu', 'EL10Ac1g01746' => 'bvu', 'EL10Ac2g03464' => 'bvu', 'EL10Ac4g08176' => 'bvu', 'EL10Ac7g17521' => 'bvu', 'EL10Ac8g20386' => 'bvu', 'EL10Ac9g21343' => 'bvu', 'EL10Ac9g22688' => 'bvu', 'Eucgr.B03434' => 'egr', 'Eucgr.D00618' => 'egr', 'Eucgr.E02395' => 'egr', 'Eucgr.F01129' => 'egr', 'Eucgr.F02622' => 'egr', 'Eucgr.F04207' => 'egr', 'FAN01G0570' => 'fan', 'FAN03G3351' => 'fan', 'FAN06G3702' => 'fan', 'FAN07G2149' => 'fan', 'FAN10G3758' => 'fan', 'FAN11G1170' => 'fan', 'FAN11G2050' => 'fan', 'FAN11G2724' => 'fan', 'FAN12G1700' => 'fan', 'FAN12G2028' => 'fan', 'FAN15G1160' => 'fan', 'FAN15G3063' => 'fan', 'FAN16G2540' => 'fan', 'FAN16G3077' => 'fan', 'FAN16G3624' => 'fan', 'FAN17G0221' => 'fan', 'FAN20G2492' => 'fan', 'FAN20G2905' => 'fan', 'FAN21G0548' => 'fan', 'FAN21G1300' => 'fan', 'FAN22G0077' => 'fan', 'FAN22G1315' => 'fan', 'FAN24G1280' => 'fan', 'FAN24G1445' => 'fan', 'FAN24G3527' => 'fan', 'FAN25G0464' => 'fan', 'FAN25G2885' => 'fan', 'FAN25G3270' => 'fan', 'FAN27G1101' => 'fan', 'FAN27G2846' => 'fan', 'FAN27G3524' => 'fan', 'FvH4_2g11770' => 'fve', 'FvH4_2g15630' => 'fve', 'FvH4_3g05570' => 'fve', 'FvH4_3g09110' => 'fve', 'FvH4_3g19940' => 'fve', 'FvH4_4g04821' => 'fve', 'FvH4_4g31480' => 'fve', 'FvH4_7g01740' => 'fve', 'Glyma.05G130400' => 'gma', 'Glyma.05G156400' => 'gma', 'Glyma.07G197000' => 'gma', 'Glyma.08G085151' => 'gma', 'Glyma.08G114500' => 'gma', 'Glyma.08G300400' => 'gma', 'Glyma.10G215800' => 'gma', 'Glyma.12G224400' => 'gma', 'Glyma.13G179300' => 'gma', 'Glyma.13G218151' => 'gma', 'Glyma.13G238800' => 'gma', 'Glyma.13G276900' => 'gma', 'Glyma.14G078200' => 'gma', 'Glyma.15G074500' => 'gma', 'Glyma.15G094100' => 'gma', 'Glyma.17G247200' => 'gma', 'Glyma.18G120100' => 'gma', 'Glyma.20G176000' => 'gma', 'Gohir.A01G063600' => 'ghi', 'Gohir.A01G170301' => 'ghi', 'Gohir.A02G060500' => 'ghi', 'Gohir.A05G133850' => 'ghi', 'Gohir.A05G161400' => 'ghi', 'Gohir.A06G012900' => 'ghi', 'Gohir.A06G035901' => 'ghi', 'Gohir.A06G127100' => 'ghi', 'Gohir.A06G210500' => 'ghi', 'Gohir.A08G008650' => 'ghi', 'Gohir.A09G072700' => 'ghi', 'Gohir.A09G088301' => 'ghi', 'Gohir.A10G040600' => 'ghi', 'Gohir.A12G036300' => 'ghi', 'Gohir.A12G143350' => 'ghi', 'Gohir.A12G165500' => 'ghi', 'Gohir.A13G145700' => 'ghi', 'Gohir.D01G050000' => 'ghi', 'Gohir.D01G051366' => 'ghi', 'Gohir.D01G161350' => 'ghi', 'Gohir.D02G065900' => 'ghi', 'Gohir.D05G164200' => 'ghi', 'Gohir.D05G355500' => 'ghi', 'Gohir.D06G010400' => 'ghi', 'Gohir.D06G111250' => 'ghi', 'Gohir.D06G132000' => 'ghi', 'Gohir.D06G210500' => 'ghi', 'Gohir.D07G165675' => 'ghi', 'Gohir.D08G062240' => 'ghi', 'Gohir.D08G086101' => 'ghi', 'Gohir.D08G138060' => 'ghi', 'Gohir.D09G072300' => 'ghi', 'Gohir.D10G041400' => 'ghi', 'Gohir.D11G191020' => 'ghi', 'Gohir.D11G212066' => 'ghi', 'Gohir.D12G036300' => 'ghi', 'Gohir.D12G168600' => 'ghi', 'Gohir.D13G150600' => 'ghi', 'Gorai.001G057300' => 'gra', 'Gorai.002G069900' => 'gra', 'Gorai.002G200000' => 'gra', 'Gorai.003G067600' => 'gra', 'Gorai.005G074800' => 'gra', 'Gorai.006G087300' => 'gra', 'Gorai.008G037500' => 'gra', 'Gorai.008G181400' => 'gra', 'Gorai.009G169400' => 'gra', 'Gorai.009G387900' => 'gra', 'Gorai.010G013300' => 'gra', 'Gorai.010G153800' => 'gra', 'Gorai.010G255800' => 'gra', 'Gorai.011G043700' => 'gra', 'Gorai.011G198900' => 'gra', 'Gorai.013G168400' => 'gra', 'GSVIVG01005212001' => 'vvi', 'GSVIVG01006163001' => 'vvi', 'GSVIVG01009625001' => 'vvi', 'GSVIVG01014338001' => 'vvi', 'GSVIVG01020005001' => 'vvi', 'GSVIVG01021450001' => 'vvi', 'GSVIVG01023975001' => 'vvi', 'GSVIVG01034490001' => 'vvi', 'HanXRQChr04g0112071' => 'han', 'HanXRQChr05g0131151' => 'han', 'HanXRQChr09g0262371' => 'han', 'HanXRQChr09g0268401' => 'han', 'HanXRQChr10g0279241' => 'han', 'HanXRQChr10g0297961' => 'han', 'HanXRQChr11g0326231' => 'han', 'HanXRQChr11g0328471' => 'han', 'HanXRQChr16g0507941' => 'han', 'HanXRQChr17g0560211' => 'han', 'Haze_02108' => 'cav', 'Haze_02428' => 'cav', 'Haze_05593' => 'cav', 'Haze_06448' => 'cav', 'Haze_09427' => 'cav', 'Haze_12022' => 'cav', 'Haze_17612' => 'cav', 'Haze_17928' => 'cav', 'Hma1.2p1_0032F.1_g019250' => 'hma', 'Hma1.2p1_0163F.1_g072690' => 'hma', 'Hma1.2p1_0265F.1_g106710' => 'hma', 'Hma1.2p1_0286F.1_g113970' => 'hma', 'Hma1.2p1_0363F.1_g136640' => 'hma', 'Hma1.2p1_0584F.1_g183470' => 'hma', 'Hma1.2p1_0885F.1_g232570' => 'hma', 'HPP92_006022' => 'vpl', 'HPP92_007320' => 'vpl', 'HPP92_011521' => 'vpl', 'HPP92_019387' => 'vpl', 'HPP92_024038' => 'vpl', 'Hund05891' => 'sun', 'Hund06450' => 'sun', 'Hund12053' => 'sun', 'Hund16800' => 'sun', 'Hund21222' => 'sun', 'Hund22896' => 'sun', 'Hund23746' => 'sun', 'Hund27083' => 'sun', 'Lalb_Chr02g0141831' => 'lal', 'Lalb_Chr02g0141841' => 'lal', 'Lalb_Chr05g0220411' => 'lal', 'Lalb_Chr06g0162081' => 'lal', 'Lalb_Chr09g0327651' => 'lal', 'Lalb_Chr13g0295051' => 'lal', 'Lalb_Chr15g0086801' => 'lal', 'Lalb_Chr16g0383781' => 'lal', 'Lalb_Chr16g0383791' => 'lal', 'Lalb_Chr18g0055441' => 'lal', 'Lalb_Chr18g0059611' => 'lal', 'Lalb_Chr20g0109661' => 'lal', 'Lalb_Chr20g0109831' => 'lal', 'Lalb_Chr20g0121871' => 'lal', 'Lalb_Chr22g0355361' => 'lal', 'Lalb_Chr25g0286371' => 'lal', 'Lj1A1187G43' => 'lonja', 'Lj1A1205T50' => 'lonja', 'Lj1A800G33' => 'lonja', 'Lj1C1187T7' => 'lonja', 'Lj1C843T11' => 'lonja', 'Lj1g0010940' => 'lja', 'Lj2A288T69' => 'lonja', 'Lj3g0024276' => 'lja', 'Lj4A47T76' => 'lonja', 'Lj4g0005805' => 'lja', 'Lj4g0006097' => 'lja', 'Lj4g0008528' => 'lja', 'Lj4g0024907' => 'lja', 'Lj5g0012472' => 'lja', 'Lj5g0018648' => 'lja', 'Lj6C789G1' => 'lonja', 'Lj6g0004000' => 'lja', 'Lj7A292G67' => 'lonja', 'Lj7A292T64' => 'lonja', 'Lj9A400T58' => 'lonja', 'Lsat_1_v5_gn_1_126181' => 'lsa', 'Lsat_1_v5_gn_4_123041' => 'lsa', 'Lsat_1_v5_gn_4_133620' => 'lsa', 'Lsat_1_v5_gn_4_53221' => 'lsa', 'Lsat_1_v5_gn_4_71961' => 'lsa', 'Lsat_1_v5_gn_7_105241' => 'lsa', 'Lsat_1_v5_gn_7_21361' => 'lsa', 'Lsat_1_v5_gn_7_28860' => 'lsa', 'Lsat_1_v5_gn_7_31260' => 'lsa', 'Lsat_1_v5_gn_8_52801' => 'lsa', 'Manes.02G191400' => 'mes', 'Manes.03G110100' => 'mes', 'Manes.04G071100' => 'mes', 'Manes.05G100500' => 'mes', 'Manes.05G164700' => 'mes', 'Manes.15G087000' => 'mes', 'Manes.15G121500' => 'mes', 'Manes.16G028300' => 'mes', 'Manes.17G046100' => 'mes', 'Manes.17G069800' => 'mes', 'Manes.18G100500' => 'mes', 'Mapoly0002s0109' => 'mpo', 'Mapoly0024s0007' => 'mpo', 'Mapoly0089s0032' => 'mpo', 'MBI04_g42241_MAGBIO' => 'mbi', 'MBI05_g11988_MAGBIO' => 'mbi', 'MBI05_g35452_MAGBIO' => 'mbi', 'MBI07_g30179_MAGBIO' => 'mbi', 'MBI07_g35859_MAGBIO' => 'mbi', 'MBI07_g35860_MAGBIO' => 'mbi', 'MBI07_g37166_MAGBIO' => 'mbi', 'MBI08_g18172_MAGBIO' => 'mbi', 'MBI09_g08441_MAGBIO' => 'mbi', 'MBI13_g01676_MAGBIO' => 'mbi', 'MBI14_g42955_MAGBIO' => 'mbi', 'MBI16_g13161_MAGBIO' => 'mbi', 'MBI17_g27204_MAGBIO' => 'mbi', 'MBI19_g21595_MAGBIO' => 'mbi', 'MD00G1148400' => 'mdo', 'MD02G1301200' => 'mdo', 'MD03G1227800' => 'mdo', 'MD05G1041100' => 'mdo', 'MD05G1124800' => 'mdo', 'MD05G1284000' => 'mdo', 'MD05G1338800' => 'mdo', 'MD05G1338900' => 'mdo', 'MD07G1022800' => 'mdo', 'MD10G1047500' => 'mdo', 'MD10G1127500' => 'mdo', 'MD10G1262300' => 'mdo', 'MD10G1293800' => 'mdo', 'MD16G1074300' => 'mdo', 'Medtr1g021670' => 'mtr', 'Medtr1g096320' => 'mtr', 'Medtr2g013690' => 'mtr', 'Medtr2g019450' => 'mtr', 'Medtr2g085170' => 'mtr', 'Medtr4g088785' => 'mtr', 'Medtr8g055930' => 'mtr', 'Medtr8g085850' => 'mtr', 'MELO3C002605.2' => 'cme', 'MELO3C003891.2' => 'cme', 'MELO3C004012.2' => 'cme', 'MELO3C007134.2' => 'cme', 'MELO3C008118.2' => 'cme', 'MELO3C016700.2' => 'cme', 'MELO3C024127.2' => 'cme', 'MELO3C033361.2' => 'cme', 'MELO3C033362.2' => 'cme', 'Migut.C00430' => 'egut', 'Migut.C01246' => 'egut', 'Migut.E00101' => 'egut', 'Migut.H01486' => 'egut', 'Migut.H01939' => 'egut', 'Migut.K00360' => 'egut', 'Migut.M00910' => 'egut', 'Migut.M01139' => 'egut', 'Migut.N02677' => 'egut', 'MSTRG.13252' => 'ama', 'MSTRG.14701' => 'ama', 'MSTRG.1521' => 'ama', 'MSTRG.15884' => 'ama', 'MSTRG.16242' => 'ama', 'MSTRG.22285' => 'ama', 'MSTRG.22444' => 'ama', 'MSTRG.2349' => 'ama', 'MSTRG.26308' => 'ama', 'MSTRG.28296' => 'ama', 'MSTRG.9895' => 'ama', 'Nitab4.5_0000110g0060' => 'nta', 'Nitab4.5_0000420g0130' => 'nta', 'Nitab4.5_0000422g0030' => 'nta', 'Nitab4.5_0000560g0180' => 'nta', 'Nitab4.5_0000703g0100' => 'nta', 'Nitab4.5_0000786g0200' => 'nta', 'Nitab4.5_0001336g0020' => 'nta', 'Nitab4.5_0001796g0030' => 'nta', 'Nitab4.5_0003348g0060' => 'nta', 'Nitab4.5_0003698g0040' => 'nta', 'Nitab4.5_0003942g0090' => 'nta', 'Nitab4.5_0004775g0070' => 'nta', 'Nitab4.5_0004864g0030' => 'nta', 'Nitab4.5_0005615g0020' => 'nta', 'Nitab4.5_0009288g0030' => 'nta', 'Nitab4.5_0009341g0010' => 'nta', 'Nitab4.5_0009535g0010' => 'nta', 'Nn1g03995' => 'nnu', 'Nn1g04100' => 'nnu', 'Nn1g06530' => 'nnu', 'Nn3g16404' => 'nnu', 'Nn3g17212' => 'nnu', 'Nn3g20776' => 'nnu', 'Nn3g21923' => 'nnu', 'Nn5g27737' => 'nnu', 'Nn5g29461' => 'nnu', 'Nn7g38355' => 'nnu', 'Nn8g39873' => 'nnu', 'Oeu000548.2' => 'oeu', 'Oeu004672.1' => 'oeu', 'Oeu015605.2' => 'oeu', 'Oeu016092.1' => 'oeu', 'Oeu017879.3' => 'oeu', 'Oeu024910.1' => 'oeu', 'Oeu028965.1' => 'oeu', 'Oeu031269.1' => 'oeu', 'Oeu031270.1' => 'oeu', 'Oeu032535.1' => 'oeu', 'Oeu034151.1' => 'oeu', 'Oeu034152.1' => 'oeu', 'Oeu034588.2' => 'oeu', 'Oeu050846.1' => 'oeu', 'Oeu050849.2' => 'oeu', 'Oeu051063.2' => 'oeu', 'Oeu052368.1' => 'oeu', 'Oeu052370.1' => 'oeu', 'Os01g0210400' => 'osa', 'Os01g0304300' => 'osa', 'Os01g0749100' => 'osa', 'Os02g0745800' => 'osa', 'Os03g0769050' => 'osa', 'Os05g0531500' => 'osa', 'Os06g0724300' => 'osa', 'Os11g0198100' => 'osa', 'Peaxi162Scf00069g01425' => 'pax', 'Peaxi162Scf00280g00811' => 'pax', 'Peaxi162Scf00310g00615' => 'pax', 'Peaxi162Scf00362g00542' => 'pax', 'Peaxi162Scf00461g00310' => 'pax', 'Peaxi162Scf00530g00118' => 'pax', 'Peaxi162Scf00541g00057' => 'pax', 'Peaxi162Scf00661g00017' => 'pax', 'Peaxi162Scf00926g00027' => 'pax', 'Peaxi162Scf01064g00263' => 'pax', 'Peaxi162Scf01211g00135' => 'pax', 'PGR004G2336' => 'pgr', 'PGR042G0327' => 'pgr', 'PGR042G1957' => 'pgr', 'PGR042G2003' => 'pgr', 'PGR042G3929' => 'pgr', 'PGR083G1137' => 'pgr', 'PGR083G1364' => 'pgr', 'PGSC0003DMG400003381' => 'stu', 'PGSC0003DMG400003417' => 'stu', 'PGSC0003DMG400008981' => 'stu', 'PGSC0003DMG400012417' => 'stu', 'PGSC0003DMG400012823' => 'stu', 'PGSC0003DMG400016885' => 'stu', 'PGSC0003DMG400022812' => 'stu', 'PGSC0003DMG400029726' => 'stu', 'PGSC0003DMG401009243' => 'stu', 'PGSC0003DMG401031505' => 'stu', 'PGSC0003DMG402031505' => 'stu', 'Phvul.001G017600' => 'pvu', 'Phvul.002G193500' => 'pvu', 'Phvul.002G228900' => 'pvu', 'Phvul.002G236800' => 'pvu', 'Phvul.003G049500' => 'pvu', 'Phvul.005G072000' => 'pvu', 'Phvul.006G164800' => 'pvu', 'Phvul.006G185100' => 'pvu', 'Phvul.007G090000' => 'pvu', 'Potri.001G399800' => 'ptr', 'Potri.002G149900' => 'ptr', 'Potri.004G044100' => 'ptr', 'Potri.004G177600' => 'ptr', 'Potri.009G138000' => 'ptr', 'Potri.010G094000' => 'ptr', 'Potri.011G053000' => 'ptr', 'Potri.011G119300' => 'ptr', 'Potri.013G113700' => 'ptr', 'Potri.018G107800' => 'ptr', 'Potri.019G084100' => 'ptr', 'Pp3c14_23720' => 'ppa', 'Pp3c16_6340' => 'ppa', 'Pp3c23_13420' => 'ppa', 'Pp3c24_2740' => 'ppa', 'Pp3c25_860' => 'ppa', 'Pp3c8_21750' => 'ppa', 'Prupe.1G273000' => 'ppe', 'Prupe.1G273700' => 'ppe', 'Prupe.1G274100' => 'ppe', 'Prupe.2G023300' => 'ppe', 'Prupe.4G048000' => 'ppe', 'Prupe.4G080400' => 'ppe', 'Prupe.4G181200' => 'ppe', 'Prupe.8G056900' => 'ppe', 'Prupe.8G168700' => 'ppe', 'Psat1g189080' => 'psa', 'Psat1g204760' => 'psa', 'Psat4g175560' => 'psa', 'Psat4g177720' => 'psa', 'Psat5g244240' => 'psa', 'Psat6g010720' => 'psa', 'Psat6g187200' => 'psa', 'Psat7g072040' => 'psa', 'PSO017G3501' => 'pso', 'PSO063G2148' => 'pso', 'PSO063G5608' => 'pso', 'PSO210G6392' => 'pso', 'PSO541G2319' => 'pso', 'PSO541G2836' => 'pso', 'PSO541G4012' => 'pso', 'PSO541G6253' => 'pso', 'PSO675G0580' => 'pso', 'PSO675G0856' => 'pso', 'PSO675G5635' => 'pso', 'PSO675G9157' => 'pso', 'PSO832G1660' => 'pso', 'PSO832G1969' => 'pso', 'QL02p007186' => 'qlo', 'QL02p033904' => 'qlo', 'QL03p064391' => 'qlo', 'QL05p040593' => 'qlo', 'QL05p058242' => 'qlo', 'QL08p021825' => 'qlo', 'QL11p004981' => 'qlo', 'RcHm_v2.0_Chr1g0318301' => 'rch', 'RcHm_v2.0_Chr4g0418501' => 'rch', 'RcHm_v2.0_Chr4g0439971' => 'rch', 'RcHm_v2.0_Chr5g0008541' => 'rch', 'RcHm_v2.0_Chr5g0014101' => 'rch', 'RcHm_v2.0_Chr5g0014131' => 'rch', 'RcHm_v2.0_Chr5g0033621' => 'rch', 'RcHm_v2.0_Chr6g0272041' => 'rch', 'RcHm_v2.0_Chr6g0278831' => 'rch', 'Rhsim02G0130400' => 'rsi', 'Rhsim02G0171100' => 'rsi', 'Rhsim05G0053000' => 'rsi', 'Rhsim05G0053100' => 'rsi', 'Rhsim06G0096500' => 'rsi', 'Rhsim06G0096600' => 'rsi', 'Rhsim06G0199100' => 'rsi', 'Rhsim12G0062300' => 'rsi', 'Rhsim12G0062800' => 'rsi', 'Sabra02G0118600' => 'sbr', 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'Solyc03g079860.2' => 'sly', 'Solyc04g079770.3' => 'sly', 'Solyc05g007430.4' => 'sly', 'Solyc07g063150.3' => 'sly', 'Solyc08g016620.3' => 'sly', 'Solyc09g057590.3' => 'sly', 'Solyc09g057600.1' => 'sly', 'Solyc10g009050.3' => 'sly', 'Solyc11g017420.2' => 'sly', 'Sopen01g053810' => 'spe', 'Sopen02g023040' => 'spe', 'Sopen03g002440' => 'spe', 'Sopen04g033350' => 'spe', 'Sopen05g003310' => 'spe', 'Sopen07g004050' => 'spe', 'Sopen07g031340' => 'spe', 'Sopen08g006990' => 'spe', 'Sopen10g004830' => 'spe', 'Sopen11g009370' => 'spe', 'Sp1g24450' => 'spa', 'Sp1g29670' => 'spa', 'Sp1g39600' => 'spa', 'Sp2g11080' => 'spa', 'Sp2g13970' => 'spa', 'Sp4g16130' => 'spa', 'Sp6g13080' => 'spa', 'Sp7g37270' => 'spa', 'TAR371G0065' => 'tar', 'TAR376G0340' => 'tar', 'TAR376G0435' => 'tar', 'TAR381G0002' => 'tar', 'TAR381G1236' => 'tar', 'TAR624G0055' => 'tar', 'TAR624G0324' => 'tar', 'TAR624G0696' => 'tar', 'TAR624G0906' => 'tar', 'TAR625G0107' => 'tar', 'TAR626G0015' => 'tar', 'TAR626G1356' => 'tar', 'TAR627G0888' => 'tar', 'TAR628G0399' => 'tar', 'TAR628G1327' => 'tar', 'TAR629G2831' => 'tar', 'TAR629G2874' => 'tar', 'TAR633G1432' => 'tar', 'TAR633G2771' => 'tar', 'THA.LOC104803394' => 'tha', 'THA.LOC104805153' => 'tha', 'THA.LOC104806784' => 'tha', 'THA.LOC104810473' => 'tha', 'THA.LOC104813100' => 'tha', 'THA.LOC104814215' => 'tha', 'THA.LOC104815554' => 'tha', 'THA.LOC104820544' => 'tha', 'THA.LOC104824754' => 'tha', 'THA.LOC104827717' => 'tha', 'Thecc.02G031400' => 'tca', 'Thecc.02G055900' => 'tca', 'Thecc.02G350800' => 'tca', 'Thecc.06G150900' => 'tca', 'Thecc.06G186600' => 'tca', 'Thecc.07G089600' => 'tca', 'Thecc.08G020400' => 'tca', 'Thecc.08G182100' => 'tca', 'Thhalv10000873m.g' => 'esa', 'Thhalv10004185m.g' => 'esa', 'Thhalv10006981m.g' => 'esa', 'Thhalv10007204m.g' => 'esa', 'Thhalv10011374m.g' => 'esa', 'Thhalv10013482m.g' => 'esa', 'Thhalv10017801m.g' => 'esa', 'Thhalv10024983m.g' => 'esa', 'TPR.G12072' => 'tpr', 'TPR.G15769' => 'tpr', 'TPR.G16504' => 'tpr', 'TPR.G16506' => 'tpr', 'TPR.G24345' => 'tpr', 'TPR.G26666' => 'tpr', 'TPR.G27320' => 'tpr', 'TPR.G31819' => 'tpr', 'TPR.G38879' => 'tpr', 'TPR.G39015' => 'tpr', 'TPR.G8819' => 'tpr', 'TWI09G0924' => 'twi', 'TWI12G0811' => 'twi', 'TWI12G1294' => 'twi', 'TWI31G0150' => 'twi', 'TWI36G1262' => 'twi', 'TWI38G1287' => 'twi', 'TWI38G1633' => 'twi', 'TWI38G1982' => 'twi', 'TWI39G0116' => 'twi', 'TWI60G1011' => 'twi', 'TWI63G0171' => 'twi', 'TWI73G0839' => 'twi', 'TWI79G1511' => 'twi', 'unitig_0.g915' => 'ugi', 'unitig_0.g916' => 'ugi', 'unitig_21.g20219' => 'ugi', 'unitig_21.g20416' => 'ugi', 'unitig_578.g16132' => 'ugi', 'unitig_578.g16718' => 'ugi', 'unitig_62.g23481' => 'ugi', 'unitig_744.g24535' => 'ugi', 'unitig_749.g13525' => 'ugi', 'vmacro01248' => 'vma', 'vmacro02290' => 'vma', 'vmacro10946' => 'vma', 'vmacro11865' => 'vma', 'vmacro12493' => 'vma', 'vmacro17322' => 'vma', 'vmacro21599' => 'vma', 'vmacro23041' => 'vma', 'VMungo0251G0004' => 'vmu', 'VMungo0251G2639' => 'vmu', 'VMungo0251G2967' => 'vmu', 'VMungo0540G0864' => 'vmu', 'VMungo0540G1569' => 'vmu', 'VMungo0647G0317' => 'vmu', 'VMungo0720G1373' => 'vmu', 'VMungo0720G1508' => 'vmu', 'VMungo1080G0485' => 'vmu', 'VMungo1215G3177' => 'vmu', 'Zm00001eb112600' => 'zma', 'Zm00001eb120220' => 'zma', 'Zm00001eb153240' => 'zma', 'Zm00001eb168880' => 'zma', 'Zm00001eb213920' => 'zma', 'Zm00001eb228280' => 'zma', 'Zm00001eb254580' => 'zma', 'Zm00001eb272180' => 'zma', 'Zm00001eb293190' => 'zma', 'Zm00001eb322930' => 'zma', 'Zm00001eb353360' => 'zma', 'Zm00001eb353390' => 'zma', 'Zm00001eb353430' => 'zma', 'Zm00001eb353440' => 'zma', 'Zm00001eb353780' => 'zma' ), 'gf_id' => 'HOM05D000499', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000499' ), 'data_identifier' => 'HOM05D000499', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000499', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1066', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p29780' => 'bna', 'A02p33180' => 'bna', 'A03p16470' => 'bna', 'A03p66010' => 'bna', 'A04p25970' => 'bna', 'A06p01270' => 'bna', 'A06p46080' => 'bna', 'A07p11400' => 'bna', 'A08p01840' => 'bna', 'A08p08230' => 'bna', 'A08p25740' => 'bna', 'A09p32070' => 'bna', 'A09p37830' => 'bna', 'A09p42840' => 'bna', 'A09p42850' => 'bna', 'Aa31LG10G2060' => 'aar', 'Aa31LG2G7410' => 'aar', 'Aa31LG6G10200' => 'aar', 'Aa31LG6G16680' => 'aar', 'Aa31LG6G8470' => 'aar', 'Aa31LG9G12730' => 'aar', 'Aa31LG9G13680' => 'aar', 'Aa31LG9G14920' => 'aar', 'Aa31LG9G6650' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4977' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5467' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3254' => 'aag', 'Actinidia02578' => 'ach', 'Actinidia07693' => 'ach', 'Actinidia08413' => 'ach', 'Actinidia08414' => 'ach', 'Actinidia15289' => 'ach', 'Actinidia19871' => 'ach', 'Actinidia21475' => 'ach', 'Actinidia22576' => 'ach', 'Actinidia28327' => 'ach', 'Actinidia32491' => 'ach', 'Actinidia39463' => 'ach', 'Actinidia39571' => 'ach', 'Ah.01g013750' => 'amhyb', 'Ah.01g023210' => 'amhyb', 'Ah.04g164850' => 'amhyb', 'Ah.05g178060' => 'amhyb', 'Ah.07g204270' => 'amhyb', 'Ah.07g208480' => 'amhyb', 'Ah.09g237410' => 'amhyb', 'Ah.14g089460' => 'amhyb', 'AL1G41790' => 'aly', 'AL1G49050' => 'aly', 'AL1G53810' => 'aly', 'AL1G61400' => 'aly', 'AL4G18580' => 'aly', 'AL5G12510' => 'aly', 'AL5G12540' => 'aly', 'AL6G43230' => 'aly', 'AL7G10370' => 'aly', 'AL7G19250' => 'aly', 'AL8G12240' => 'aly', 'AL8G18540' => 'aly', 'Aqoxy1G02409' => 'aox', 'Aqoxy2G03993' => 'aox', 'Aqoxy3G03357' => 'aox', 'Aqoxy4G00785' => 'aox', 'Aqoxy5G02598' => 'aox', 'Aqoxy6G00132' => 'aox', 'Aqoxy7G01776' => 'aox', 'Aqoxy7G02316' => 'aox', 'Aqoxy7G03973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.12AFKW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B8730' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27IQR1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3F75VG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3RE0GA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41TCQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.527VTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FIR39' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5W8UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DA38EV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ63HS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H1I32C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HC27T5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4M8AP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7N3CZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9UVDZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LS1NQA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT1D4B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SKC4TM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCFV76' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF9Q1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQWD9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1ZM88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WE07RT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YCK7VH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJE6Q6' => 'arhy', 'AT1G28240' => 'ath', 'AT1G34550' => 'ath', 'AT1G53040' => 'ath', 'AT2G02910' => 'ath', 'AT4G09630' => 'ath', 'AT4G38500' => 'ath', 'AT5G42660' => 'ath', 'AT5G46220' => 'ath', 'ATR0152G026' => 'atr', 'ATR0564G343' => 'atr', 'ATR0706G151' => 'atr', 'ATR0733G207' => 'atr', 'ATR0751G234' => 'atr', 'ATR0807G048' => 'atr', 'ATR1091G084' => 'atr', 'Atru.chr10.1229' => 'acertr', 'Atru.chr10.1230' => 'acertr', 'Atru.chr10.1874' => 'acertr', 'Atru.chr11.1808' => 'acertr', 'Atru.chr13.1795' => 'acertr', 'Atru.chr13.570' => 'acertr', 'Atru.chr2.2608' => 'acertr', 'Atru.chr2.2609' => 'acertr', 'Atru.chr5.3428' => 'acertr', 'Atru.chr8.1171' => 'acertr', 'AUR62004651' => 'cqu', 'AUR62008675' => 'cqu', 'AUR62010014' => 'cqu', 'AUR62013004' => 'cqu', 'AUR62014825' => 'cqu', 'AUR62015015' => 'cqu', 'AUR62015151' => 'cqu', 'AUR62017020' => 'cqu', 'AUR62019422' => 'cqu', 'AUR62023570' => 'cqu', 'AUR62025571' => 'cqu', 'AUR62029098' => 'cqu', 'AUR62033863' => 'cqu', 'AUR62034296' => 'cqu', 'AUR62040075' => 'cqu', 'BcaB02g07334' => 'bca', 'BcaB02g10575' => 'bca', 'BcaB03g12119' => 'bca', 'BcaB03g12120' => 'bca', 'BcaB03g13945' => 'bca', 'BcaB04g17123' => 'bca', 'BcaB04g17867' => 'bca', 'BcaB04g19839' => 'bca', 'BcaB07g30317' => 'bca', 'BcaB07g32432' => 'bca', 'BcaB07g33362' => 'bca', 'BcaB08g36611' => 'bca', 'BcaC01g00028' => 'bca', 'BcaC01g01356' => 'bca', 'BcaC01g02034' => 'bca', 'BcaC01g06051' => 'bca', 'BcaC03g16839' => 'bca', 'BcaC03g17176' => 'bca', 'BcaC05g26829' => 'bca', 'BcaC06g31490' => 'bca', 'BcaC06g35344' => 'bca', 'BcaC06g36570' => 'bca', 'BcaC07g37537' => 'bca', 'BcaC08g43491' => 'bca', 'BcaC08g43773' => 'bca', 'BcaNung00234' => 'bca', 'BcaNung01982' => 'bca', 'BcaNung03707' => 'bca', 'BcaNung06454' => 'bca', 'BolC2t10762H' => 'bol', 'BolC2t11191H' => 'bol', 'BolC3t14322H' => 'bol', 'BolC3t19747H' => 'bol', 'BolC3t21425H' => 'bol', 'BolC4t27800H' => 'bol', 'BolC5t31423H' => 'bol', 'BolC6t35951H' => 'bol', 'BolC6t36282H' => 'bol', 'BolC7t40678H' => 'bol', 'BolC7t40679H' => 'bol', 'BolC7t42222H' => 'bol', 'BolC7t43492H' => 'bol', 'BolC7t46785H' => 'bol', 'BolC8t47853H' => 'bol', 'BolC9t56805H' => 'bol', 'BraA02t08000Z' => 'bra', 'BraA02t08341Z' => 'bra', 'BraA03t10936Z' => 'bra', 'BraA03t15657Z' => 'bra', 'BraA04t18100Z' => 'bra', 'BraA05t20523Z' => 'bra', 'BraA06t23353Z' => 'bra', 'BraA06t27473Z' => 'bra', 'BraA06t27769Z' => 'bra', 'BraA07t28928Z' => 'bra', 'BraA08t32236Z' => 'bra', 'BraA08t32841Z' => 'bra', 'BraA08t34524Z' => 'bra', 'BraA09t38742Z' => 'bra', 'BraA09t39295Z' => 'bra', 'C02p47180' => 'bna', 'C02p50990' => 'bna', 'C03p19360' => 'bna', 'C03p74950' => 'bna', 'C03p91000' => 'bna', 'C04p63260' => 'bna', 'C05p27050' => 'bna', 'C06p08750' => 'bna', 'C06p11490' => 'bna', 'C07p02820' => 'bna', 'C07p17180' => 'bna', 'C07p29440' => 'bna', 'C07p63730' => 'bna', 'C09p39260' => 'bna', 'CAN.G1164.34' => 'can', 'CAN.G1164.39' => 'can', 'CAN.G1530.3' => 'can', 'CAN.G162.61' => 'can', 'CAN.G176.6' => 'can', 'CAN.G289.49' => 'can', 'CAN.G370.21' => 'can', 'CAN.G370.22' => 'can', 'CAN.G371.117' => 'can', 'CAN.G58.37' => 'can', 'CAN.G588.98' => 'can', 'CANSAT21G2266' => 'cansat', 'CANSAT25G2799' => 'cansat', 'CANSAT35G0862' => 'cansat', 'CANSAT35G1704' => 'cansat', 'CANSAT35G1760' => 'cansat', 'CANSAT56G3971' => 'cansat', 'CANSAT56G4116' => 'cansat', 'CANSAT80G1259' => 'cansat', 'CARHR027730' => 'chi', 'CARHR033880' => 'chi', 'CARHR043270' => 'chi', 'CARHR145330' => 'chi', 'CARHR145340' => 'chi', 'CARHR175570' => 'chi', 'CARHR181570' => 'chi', 'CARHR258470' => 'chi', 'CARHR260490' => 'chi', 'CARHR294220' => 'chi', 'Carub.0001s2668' => 'cru', 'Carub.0001s3257' => 'cru', 'Carub.0001s4220' => 'cru', 'Carub.0005s0179' => 'cru', 'Carub.0006s2807' => 'cru', 'Carub.0007s0039' => 'cru', 'Carub.0008s0169' => 'cru', 'Carub.0008s0636' => 'cru', 'Ca_00338_v3' => 'car', 'Ca_00542_v3' => 'car', 'Ca_01844_v3' => 'car', 'Ca_10611_v3' => 'car', 'Ca_13326_v3' => 'car', 'Ca_17944_v3' => 'car', 'Ca_18546_v3' => 'car', 'Ca_24219_v3' => 'car', 'Ca_29972_v3' => 'car', 'CBR_g3681' => 'cbr', 'CBR_g40021' => 'cbr', 'Cc01_g08140' => 'ccan', 'Cc02_g13410' => 'ccan', 'Cc02_g37480' => 'ccan', 'Cc05_g12030' => 'ccan', 'Cc09_g03370' => 'ccan', 'Cc09_g10300' => 'ccan', 'Cc10_g03530' => 'ccan', 'Cc10_g11380' => 'ccan', 'CDE01G0176' => 'cde', 'CDE02G0675' => 'cde', 'CDE02G0942' => 'cde', 'CDE02G1153' => 'cde', 'CDE02G4177' => 'cde', 'CDE04G2117' => 'cde', 'CDE04G2736' => 'cde', 'CDE08G1161' => 'cde', 'CDE09G1238' => 'cde', 'Cfa000467' => 'cfa', 'Cfa000947' => 'cfa', 'Cfa004969' => 'cfa', 'Cfa005284' => 'cfa', 'Cfa008993' => 'cfa', 'Cfa018187' => 'cfa', 'Cfa018454' => 'cfa', 'Cfa020585' => 'cfa', 'Ciclev10000424m.g' => 'ccl', 'Ciclev10003605m.g' => 'ccl', 'Ciclev10007828m.g' => 'ccl', 'Ciclev10014620m.g' => 'ccl', 'Ciclev10015169m.g' => 'ccl', 'Ciclev10018291m.g' => 'ccl', 'Ciclev10028256m.g' => 'ccl', 'Ciclev10033822m.g' => 'ccl', 'CiPaw.05G060300' => 'cil', 'CiPaw.05G085000' => 'cil', 'CiPaw.06G083700' => 'cil', 'CiPaw.06G120300' => 'cil', 'CiPaw.09G060500' => 'cil', 'CiPaw.09G123800' => 'cil', 'CiPaw.11G169700' => 'cil', 'CiPaw.12G118300' => 'cil', 'CiPaw.15G071000' => 'cil', 'CiPaw.15G081900' => 'cil', 'ClCG01G024610' => 'cla', 'ClCG03G006070' => 'cla', 'ClCG05G019250' => 'cla', 'ClCG09G009500' => 'cla', 'ClCG11G008200' => 'cla', 'ClCG11G018080' => 'cla', 'COL.COLO4_17373' => 'col', 'COL.COLO4_22994' => 'col', 'COL.COLO4_26389' => 'col', 'COL.COLO4_27170' => 'col', 'COL.COLO4_31074' => 'col', 'COL.COLO4_31465' => 'col', 'COL.COLO4_36438' => 'col', 'COL.COLO4_36439' => 'col', 'Cpa.g.c38781' => 'cpa', 'Cpa.g.sc128.12' => 'cpa', 'Cpa.g.sc166.7' => 'cpa', 'Cpa.g.sc166.8' => 'cpa', 'Cpa.g.sc20.111' => 'cpa', 'Cpa.g.sc27.31' => 'cpa', 'Cpa.g.sc64.36' => 'cpa', 'Cpa.g.sc64.37' => 'cpa', 'Cpa.g.sc66.49' => 'cpa', 'Cpa.g.sc80.64' => 'cpa', 'CsaV3_1G012320' => 'csa', 'CsaV3_2G008480' => 'csa', 'CsaV3_2G033450' => 'csa', 'CsaV3_3G044830' => 'csa', 'CsaV3_4G033710' => 'csa', 'CsaV3_6G051730' => 'csa', 'CsaV3_7G025350' => 'csa', 'CSS0001067' => 'camsi', 'CSS0005996' => 'camsi', 'CSS0006590' => 'camsi', 'CSS0009673' => 'camsi', 'CSS0010201' => 'camsi', 'CSS0010549' => 'camsi', 'CSS0011364' => 'camsi', 'CSS0014473' => 'camsi', 'CSS0014961' => 'camsi', 'CSS0020191' => 'camsi', 'CSS0021165' => 'camsi', 'CSS0022306' => 'camsi', 'CSS0030591' => 'camsi', 'CSS0030696' => 'camsi', 'CSS0032653' => 'camsi', 'CSS0037487' => 'camsi', 'CSS0041102' => 'camsi', 'CSS0041261' => 'camsi', 'CSS0046246' => 'camsi', 'CSS0049256' => 'camsi', 'DCAR_004075' => 'dca', 'DCAR_011538' => 'dca', 'DCAR_019553' => 'dca', 'DCAR_020952' => 'dca', 'DCAR_021739' => 'dca', 'DCAR_027407' => 'dca', 'DCAR_027913' => 'dca', 'DCAR_028066' => 'dca', 'Dinv05899' => 'din', 'Dinv07563' => 'din', 'Dinv08010' => 'din', 'Dinv14125' => 'din', 'Dinv20172' => 'din', 'Dinv30743' => 'din', 'Dinv31229' => 'din', 'Dinv34162' => 'din', 'Dinv36028' => 'din', 'Dinv39368' => 'din', 'Dinv40565' => 'din', 'Dinv41706' => 'din', 'Duzib052G0089' => 'dzi', 'Duzib116G0641' => 'dzi', 'Duzib132G0069' => 'dzi', 'Duzib132G1219' => 'dzi', 'Duzib147G0278' => 'dzi', 'Duzib160G0480' => 'dzi', 'Duzib170G0661' => 'dzi', 'Duzib177G0591' => 'dzi', 'Duzib187G1353' => 'dzi', 'Duzib192G0858' => 'dzi', 'Duzib192G0883' => 'dzi', 'Duzib213G0506' => 'dzi', 'Duzib235G0289' => 'dzi', 'Duzib251G0422' => 'dzi', 'ECA232G3898' => 'eca', 'ECA233G5950' => 'eca', 'ECA234G1699' => 'eca', 'ECA234G2421' => 'eca', 'ECA236G0426' => 'eca', 'ECA236G4331' => 'eca', 'ECA248G2573' => 'eca', 'EL10Ac1g00077' => 'bvu', 'EL10Ac1g01746' => 'bvu', 'EL10Ac2g03464' => 'bvu', 'EL10Ac4g08176' => 'bvu', 'EL10Ac7g17521' => 'bvu', 'EL10Ac8g20386' => 'bvu', 'EL10Ac9g21343' => 'bvu', 'EL10Ac9g22688' => 'bvu', 'Eucgr.B03434' => 'egr', 'Eucgr.D00618' => 'egr', 'Eucgr.E02395' => 'egr', 'Eucgr.F01129' => 'egr', 'Eucgr.F02622' => 'egr', 'Eucgr.F04207' => 'egr', 'FAN01G0570' => 'fan', 'FAN03G3351' => 'fan', 'FAN06G3702' => 'fan', 'FAN07G2149' => 'fan', 'FAN10G3758' => 'fan', 'FAN11G1170' => 'fan', 'FAN11G2050' => 'fan', 'FAN11G2724' => 'fan', 'FAN12G1700' => 'fan', 'FAN12G2028' => 'fan', 'FAN15G1160' => 'fan', 'FAN15G3063' => 'fan', 'FAN16G2540' => 'fan', 'FAN16G3077' => 'fan', 'FAN16G3624' => 'fan', 'FAN17G0221' => 'fan', 'FAN20G2492' => 'fan', 'FAN20G2905' => 'fan', 'FAN21G0548' => 'fan', 'FAN21G1300' => 'fan', 'FAN22G0077' => 'fan', 'FAN22G1315' => 'fan', 'FAN24G1280' => 'fan', 'FAN24G1445' => 'fan', 'FAN24G3527' => 'fan', 'FAN25G0464' => 'fan', 'FAN25G2885' => 'fan', 'FAN25G3270' => 'fan', 'FAN27G1101' => 'fan', 'FAN27G2846' => 'fan', 'FAN27G3524' => 'fan', 'FvH4_2g11770' => 'fve', 'FvH4_2g15630' => 'fve', 'FvH4_3g05570' => 'fve', 'FvH4_3g09110' => 'fve', 'FvH4_3g19940' => 'fve', 'FvH4_4g04821' => 'fve', 'FvH4_4g31480' => 'fve', 'FvH4_7g01740' => 'fve', 'Glyma.05G130400' => 'gma', 'Glyma.05G156400' => 'gma', 'Glyma.07G197000' => 'gma', 'Glyma.08G085151' => 'gma', 'Glyma.08G114500' => 'gma', 'Glyma.08G300400' => 'gma', 'Glyma.10G215800' => 'gma', 'Glyma.12G224400' => 'gma', 'Glyma.13G179300' => 'gma', 'Glyma.13G218151' => 'gma', 'Glyma.13G238800' => 'gma', 'Glyma.13G276900' => 'gma', 'Glyma.14G078200' => 'gma', 'Glyma.15G074500' => 'gma', 'Glyma.15G094100' => 'gma', 'Glyma.17G247200' => 'gma', 'Glyma.18G120100' => 'gma', 'Glyma.20G176000' => 'gma', 'Gohir.A01G063600' => 'ghi', 'Gohir.A01G170301' => 'ghi', 'Gohir.A02G060500' => 'ghi', 'Gohir.A05G133850' => 'ghi', 'Gohir.A05G161400' => 'ghi', 'Gohir.A06G012900' => 'ghi', 'Gohir.A06G035901' => 'ghi', 'Gohir.A06G127100' => 'ghi', 'Gohir.A06G210500' => 'ghi', 'Gohir.A08G008650' => 'ghi', 'Gohir.A09G072700' => 'ghi', 'Gohir.A09G088301' => 'ghi', 'Gohir.A10G040600' => 'ghi', 'Gohir.A12G036300' => 'ghi', 'Gohir.A12G143350' => 'ghi', 'Gohir.A12G165500' => 'ghi', 'Gohir.A13G145700' => 'ghi', 'Gohir.D01G050000' => 'ghi', 'Gohir.D01G051366' => 'ghi', 'Gohir.D01G161350' => 'ghi', 'Gohir.D02G065900' => 'ghi', 'Gohir.D05G164200' => 'ghi', 'Gohir.D05G355500' => 'ghi', 'Gohir.D06G010400' => 'ghi', 'Gohir.D06G111250' => 'ghi', 'Gohir.D06G132000' => 'ghi', 'Gohir.D06G210500' => 'ghi', 'Gohir.D07G165675' => 'ghi', 'Gohir.D08G062240' => 'ghi', 'Gohir.D08G086101' => 'ghi', 'Gohir.D08G138060' => 'ghi', 'Gohir.D09G072300' => 'ghi', 'Gohir.D10G041400' => 'ghi', 'Gohir.D11G191020' => 'ghi', 'Gohir.D11G212066' => 'ghi', 'Gohir.D12G036300' => 'ghi', 'Gohir.D12G168600' => 'ghi', 'Gohir.D13G150600' => 'ghi', 'Gorai.001G057300' => 'gra', 'Gorai.002G069900' => 'gra', 'Gorai.002G200000' => 'gra', 'Gorai.003G067600' => 'gra', 'Gorai.005G074800' => 'gra', 'Gorai.006G087300' => 'gra', 'Gorai.008G037500' => 'gra', 'Gorai.008G181400' => 'gra', 'Gorai.009G169400' => 'gra', 'Gorai.009G387900' => 'gra', 'Gorai.010G013300' => 'gra', 'Gorai.010G153800' => 'gra', 'Gorai.010G255800' => 'gra', 'Gorai.011G043700' => 'gra', 'Gorai.011G198900' => 'gra', 'Gorai.013G168400' => 'gra', 'GSVIVG01005212001' => 'vvi', 'GSVIVG01006163001' => 'vvi', 'GSVIVG01009625001' => 'vvi', 'GSVIVG01014338001' => 'vvi', 'GSVIVG01020005001' => 'vvi', 'GSVIVG01021450001' => 'vvi', 'GSVIVG01023975001' => 'vvi', 'GSVIVG01034490001' => 'vvi', 'HanXRQChr04g0112071' => 'han', 'HanXRQChr05g0131151' => 'han', 'HanXRQChr09g0262371' => 'han', 'HanXRQChr09g0268401' => 'han', 'HanXRQChr10g0279241' => 'han', 'HanXRQChr10g0297961' => 'han', 'HanXRQChr11g0326231' => 'han', 'HanXRQChr11g0328471' => 'han', 'HanXRQChr16g0507941' => 'han', 'HanXRQChr17g0560211' => 'han', 'Haze_02108' => 'cav', 'Haze_02428' => 'cav', 'Haze_05593' => 'cav', 'Haze_06448' => 'cav', 'Haze_09427' => 'cav', 'Haze_12022' => 'cav', 'Haze_17612' => 'cav', 'Haze_17928' => 'cav', 'Hma1.2p1_0032F.1_g019250' => 'hma', 'Hma1.2p1_0163F.1_g072690' => 'hma', 'Hma1.2p1_0265F.1_g106710' => 'hma', 'Hma1.2p1_0286F.1_g113970' => 'hma', 'Hma1.2p1_0363F.1_g136640' => 'hma', 'Hma1.2p1_0584F.1_g183470' => 'hma', 'Hma1.2p1_0885F.1_g232570' => 'hma', 'HPP92_006022' => 'vpl', 'HPP92_007320' => 'vpl', 'HPP92_011521' => 'vpl', 'HPP92_019387' => 'vpl', 'HPP92_024038' => 'vpl', 'Hund05891' => 'sun', 'Hund06450' => 'sun', 'Hund12053' => 'sun', 'Hund16800' => 'sun', 'Hund21222' => 'sun', 'Hund22896' => 'sun', 'Hund23746' => 'sun', 'Hund27083' => 'sun', 'Lalb_Chr02g0141831' => 'lal', 'Lalb_Chr02g0141841' => 'lal', 'Lalb_Chr05g0220411' => 'lal', 'Lalb_Chr06g0162081' => 'lal', 'Lalb_Chr09g0327651' => 'lal', 'Lalb_Chr13g0295051' => 'lal', 'Lalb_Chr15g0086801' => 'lal', 'Lalb_Chr16g0383781' => 'lal', 'Lalb_Chr16g0383791' => 'lal', 'Lalb_Chr18g0055441' => 'lal', 'Lalb_Chr18g0059611' => 'lal', 'Lalb_Chr20g0109661' => 'lal', 'Lalb_Chr20g0109831' => 'lal', 'Lalb_Chr20g0121871' => 'lal', 'Lalb_Chr22g0355361' => 'lal', 'Lalb_Chr25g0286371' => 'lal', 'Lj1A1187G43' => 'lonja', 'Lj1A1205T50' => 'lonja', 'Lj1A800G33' => 'lonja', 'Lj1C1187T7' => 'lonja', 'Lj1C843T11' => 'lonja', 'Lj1g0010940' => 'lja', 'Lj2A288T69' => 'lonja', 'Lj3g0024276' => 'lja', 'Lj4A47T76' => 'lonja', 'Lj4g0005805' => 'lja', 'Lj4g0006097' => 'lja', 'Lj4g0008528' => 'lja', 'Lj4g0024907' => 'lja', 'Lj5g0012472' => 'lja', 'Lj5g0018648' => 'lja', 'Lj6C789G1' => 'lonja', 'Lj6g0004000' => 'lja', 'Lj7A292G67' => 'lonja', 'Lj7A292T64' => 'lonja', 'Lj9A400T58' => 'lonja', 'Lsat_1_v5_gn_1_126181' => 'lsa', 'Lsat_1_v5_gn_4_123041' => 'lsa', 'Lsat_1_v5_gn_4_133620' => 'lsa', 'Lsat_1_v5_gn_4_53221' => 'lsa', 'Lsat_1_v5_gn_4_71961' => 'lsa', 'Lsat_1_v5_gn_7_105241' => 'lsa', 'Lsat_1_v5_gn_7_21361' => 'lsa', 'Lsat_1_v5_gn_7_28860' => 'lsa', 'Lsat_1_v5_gn_7_31260' => 'lsa', 'Lsat_1_v5_gn_8_52801' => 'lsa', 'Manes.02G191400' => 'mes', 'Manes.03G110100' => 'mes', 'Manes.04G071100' => 'mes', 'Manes.05G100500' => 'mes', 'Manes.05G164700' => 'mes', 'Manes.15G087000' => 'mes', 'Manes.15G121500' => 'mes', 'Manes.16G028300' => 'mes', 'Manes.17G046100' => 'mes', 'Manes.17G069800' => 'mes', 'Manes.18G100500' => 'mes', 'Mapoly0002s0109' => 'mpo', 'Mapoly0024s0007' => 'mpo', 'Mapoly0089s0032' => 'mpo', 'MBI04_g42241_MAGBIO' => 'mbi', 'MBI05_g11988_MAGBIO' => 'mbi', 'MBI05_g35452_MAGBIO' => 'mbi', 'MBI07_g30179_MAGBIO' => 'mbi', 'MBI07_g35859_MAGBIO' => 'mbi', 'MBI07_g35860_MAGBIO' => 'mbi', 'MBI07_g37166_MAGBIO' => 'mbi', 'MBI08_g18172_MAGBIO' => 'mbi', 'MBI09_g08441_MAGBIO' => 'mbi', 'MBI13_g01676_MAGBIO' => 'mbi', 'MBI14_g42955_MAGBIO' => 'mbi', 'MBI16_g13161_MAGBIO' => 'mbi', 'MBI17_g27204_MAGBIO' => 'mbi', 'MBI19_g21595_MAGBIO' => 'mbi', 'MD00G1148400' => 'mdo', 'MD02G1301200' => 'mdo', 'MD03G1227800' => 'mdo', 'MD05G1041100' => 'mdo', 'MD05G1124800' => 'mdo', 'MD05G1284000' => 'mdo', 'MD05G1338800' => 'mdo', 'MD05G1338900' => 'mdo', 'MD07G1022800' => 'mdo', 'MD10G1047500' => 'mdo', 'MD10G1127500' => 'mdo', 'MD10G1262300' => 'mdo', 'MD10G1293800' => 'mdo', 'MD16G1074300' => 'mdo', 'Medtr1g021670' => 'mtr', 'Medtr1g096320' => 'mtr', 'Medtr2g013690' => 'mtr', 'Medtr2g019450' => 'mtr', 'Medtr2g085170' => 'mtr', 'Medtr4g088785' => 'mtr', 'Medtr8g055930' => 'mtr', 'Medtr8g085850' => 'mtr', 'MELO3C002605.2' => 'cme', 'MELO3C003891.2' => 'cme', 'MELO3C004012.2' => 'cme', 'MELO3C007134.2' => 'cme', 'MELO3C008118.2' => 'cme', 'MELO3C016700.2' => 'cme', 'MELO3C024127.2' => 'cme', 'MELO3C033361.2' => 'cme', 'MELO3C033362.2' => 'cme', 'Migut.C00430' => 'egut', 'Migut.C01246' => 'egut', 'Migut.E00101' => 'egut', 'Migut.H01486' => 'egut', 'Migut.H01939' => 'egut', 'Migut.K00360' => 'egut', 'Migut.M00910' => 'egut', 'Migut.M01139' => 'egut', 'Migut.N02677' => 'egut', 'MSTRG.13252' => 'ama', 'MSTRG.14701' => 'ama', 'MSTRG.1521' => 'ama', 'MSTRG.15884' => 'ama', 'MSTRG.16242' => 'ama', 'MSTRG.22285' => 'ama', 'MSTRG.22444' => 'ama', 'MSTRG.2349' => 'ama', 'MSTRG.26308' => 'ama', 'MSTRG.28296' => 'ama', 'MSTRG.9895' => 'ama', 'Nitab4.5_0000110g0060' => 'nta', 'Nitab4.5_0000420g0130' => 'nta', 'Nitab4.5_0000422g0030' => 'nta', 'Nitab4.5_0000560g0180' => 'nta', 'Nitab4.5_0000703g0100' => 'nta', 'Nitab4.5_0000786g0200' => 'nta', 'Nitab4.5_0001336g0020' => 'nta', 'Nitab4.5_0001796g0030' => 'nta', 'Nitab4.5_0003348g0060' => 'nta', 'Nitab4.5_0003698g0040' => 'nta', 'Nitab4.5_0003942g0090' => 'nta', 'Nitab4.5_0004775g0070' => 'nta', 'Nitab4.5_0004864g0030' => 'nta', 'Nitab4.5_0005615g0020' => 'nta', 'Nitab4.5_0009288g0030' => 'nta', 'Nitab4.5_0009341g0010' => 'nta', 'Nitab4.5_0009535g0010' => 'nta', 'Nn1g03995' => 'nnu', 'Nn1g04100' => 'nnu', 'Nn1g06530' => 'nnu', 'Nn3g16404' => 'nnu', 'Nn3g17212' => 'nnu', 'Nn3g20776' => 'nnu', 'Nn3g21923' => 'nnu', 'Nn5g27737' => 'nnu', 'Nn5g29461' => 'nnu', 'Nn7g38355' => 'nnu', 'Nn8g39873' => 'nnu', 'Oeu000548.2' => 'oeu', 'Oeu004672.1' => 'oeu', 'Oeu015605.2' => 'oeu', 'Oeu016092.1' => 'oeu', 'Oeu017879.3' => 'oeu', 'Oeu024910.1' => 'oeu', 'Oeu028965.1' => 'oeu', 'Oeu031269.1' => 'oeu', 'Oeu031270.1' => 'oeu', 'Oeu032535.1' => 'oeu', 'Oeu034151.1' => 'oeu', 'Oeu034152.1' => 'oeu', 'Oeu034588.2' => 'oeu', 'Oeu050846.1' => 'oeu', 'Oeu050849.2' => 'oeu', 'Oeu051063.2' => 'oeu', 'Oeu052368.1' => 'oeu', 'Oeu052370.1' => 'oeu', 'Os01g0210400' => 'osa', 'Os01g0304300' => 'osa', 'Os01g0749100' => 'osa', 'Os02g0745800' => 'osa', 'Os03g0769050' => 'osa', 'Os05g0531500' => 'osa', 'Os06g0724300' => 'osa', 'Os11g0198100' => 'osa', 'Peaxi162Scf00069g01425' => 'pax', 'Peaxi162Scf00280g00811' => 'pax', 'Peaxi162Scf00310g00615' => 'pax', 'Peaxi162Scf00362g00542' => 'pax', 'Peaxi162Scf00461g00310' => 'pax', 'Peaxi162Scf00530g00118' => 'pax', 'Peaxi162Scf00541g00057' => 'pax', 'Peaxi162Scf00661g00017' => 'pax', 'Peaxi162Scf00926g00027' => 'pax', 'Peaxi162Scf01064g00263' => 'pax', 'Peaxi162Scf01211g00135' => 'pax', 'PGR004G2336' => 'pgr', 'PGR042G0327' => 'pgr', 'PGR042G1957' => 'pgr', 'PGR042G2003' => 'pgr', 'PGR042G3929' => 'pgr', 'PGR083G1137' => 'pgr', 'PGR083G1364' => 'pgr', 'PGSC0003DMG400003381' => 'stu', 'PGSC0003DMG400003417' => 'stu', 'PGSC0003DMG400008981' => 'stu', 'PGSC0003DMG400012417' => 'stu', 'PGSC0003DMG400012823' => 'stu', 'PGSC0003DMG400016885' => 'stu', 'PGSC0003DMG400022812' => 'stu', 'PGSC0003DMG400029726' => 'stu', 'PGSC0003DMG401009243' => 'stu', 'PGSC0003DMG401031505' => 'stu', 'PGSC0003DMG402031505' => 'stu', 'Phvul.001G017600' => 'pvu', 'Phvul.002G193500' => 'pvu', 'Phvul.002G228900' => 'pvu', 'Phvul.002G236800' => 'pvu', 'Phvul.003G049500' => 'pvu', 'Phvul.005G072000' => 'pvu', 'Phvul.006G164800' => 'pvu', 'Phvul.006G185100' => 'pvu', 'Phvul.007G090000' => 'pvu', 'Potri.001G399800' => 'ptr', 'Potri.002G149900' => 'ptr', 'Potri.004G044100' => 'ptr', 'Potri.004G177600' => 'ptr', 'Potri.009G138000' => 'ptr', 'Potri.010G094000' => 'ptr', 'Potri.011G053000' => 'ptr', 'Potri.011G119300' => 'ptr', 'Potri.013G113700' => 'ptr', 'Potri.018G107800' => 'ptr', 'Potri.019G084100' => 'ptr', 'Pp3c14_23720' => 'ppa', 'Pp3c16_6340' => 'ppa', 'Pp3c23_13420' => 'ppa', 'Pp3c24_2740' => 'ppa', 'Pp3c25_860' => 'ppa', 'Pp3c8_21750' => 'ppa', 'Prupe.1G273000' => 'ppe', 'Prupe.1G273700' => 'ppe', 'Prupe.1G274100' => 'ppe', 'Prupe.2G023300' => 'ppe', 'Prupe.4G048000' => 'ppe', 'Prupe.4G080400' => 'ppe', 'Prupe.4G181200' => 'ppe', 'Prupe.8G056900' => 'ppe', 'Prupe.8G168700' => 'ppe', 'Psat1g189080' => 'psa', 'Psat1g204760' => 'psa', 'Psat4g175560' => 'psa', 'Psat4g177720' => 'psa', 'Psat5g244240' => 'psa', 'Psat6g010720' => 'psa', 'Psat6g187200' => 'psa', 'Psat7g072040' => 'psa', 'PSO017G3501' => 'pso', 'PSO063G2148' => 'pso', 'PSO063G5608' => 'pso', 'PSO210G6392' => 'pso', 'PSO541G2319' => 'pso', 'PSO541G2836' => 'pso', 'PSO541G4012' => 'pso', 'PSO541G6253' => 'pso', 'PSO675G0580' => 'pso', 'PSO675G0856' => 'pso', 'PSO675G5635' => 'pso', 'PSO675G9157' => 'pso', 'PSO832G1660' => 'pso', 'PSO832G1969' => 'pso', 'QL02p007186' => 'qlo', 'QL02p033904' => 'qlo', 'QL03p064391' => 'qlo', 'QL05p040593' => 'qlo', 'QL05p058242' => 'qlo', 'QL08p021825' => 'qlo', 'QL11p004981' => 'qlo', 'RcHm_v2.0_Chr1g0318301' => 'rch', 'RcHm_v2.0_Chr4g0418501' => 'rch', 'RcHm_v2.0_Chr4g0439971' => 'rch', 'RcHm_v2.0_Chr5g0008541' => 'rch', 'RcHm_v2.0_Chr5g0014101' => 'rch', 'RcHm_v2.0_Chr5g0014131' => 'rch', 'RcHm_v2.0_Chr5g0033621' => 'rch', 'RcHm_v2.0_Chr6g0272041' => 'rch', 'RcHm_v2.0_Chr6g0278831' => 'rch', 'Rhsim02G0130400' => 'rsi', 'Rhsim02G0171100' => 'rsi', 'Rhsim05G0053000' => 'rsi', 'Rhsim05G0053100' => 'rsi', 'Rhsim06G0096500' => 'rsi', 'Rhsim06G0096600' => 'rsi', 'Rhsim06G0199100' => 'rsi', 'Rhsim12G0062300' => 'rsi', 'Rhsim12G0062800' => 'rsi', 'Sabra02G0118600' => 'sbr', 'Sabra04G0027300' => 'sbr', 'Sabra04G0119500' => 'sbr', 'Sabra08G0112500' => 'sbr', 'Sabra11G0036800' => 'sbr', 'Sabra11G0103800' => 'sbr', 'Sabra13G0096300' => 'sbr', 'Sabra16G0262300' => 'sbr', 'Sabra18G0091700' => 'sbr', 'Sabra19G0095400' => 'sbr', 'SalBow6G3080' => 'sbo', 'SalBow7G1157' => 'sbo', 'SalBow7G2123' => 'sbo', 'SalBow7G2285' => 'sbo', 'SalBow7G3537' => 'sbo', 'SalBow8G2947' => 'sbo', 'SalBow8G4463' => 'sbo', 'SalBow8G5466' => 'sbo', 'Sc01g0001750' => 'sci', 'Sc02g0006640' => 'sci', 'Sc02g0006670' => 'sci', 'Sc04g0008220' => 'sci', 'Sc05g0006190' => 'sci', 'Sc08g0002760' => 'sci', 'Sc17g0006170' => 'sci', 'Sc22g0002050' => 'sci', 'Sc23g0001190' => 'sci', 'Sc24g0000980' => 'sci', 'Sed0006245' => 'sed', 'Sed0007543' => 'sed', 'Sed0009411' => 'sed', 'Sed0010765' => 'sed', 'Sed0012944' => 'sed', 'Sed0014682' => 'sed', 'Sed0016174' => 'sed', 'Sed0016796' => 'sed', 'Sed0020317' => 'sed', 'Sed0021467' => 'sed', 'SEGI_01316' => 'sgi', 'SEGI_03374' => 'sgi', 'SEGI_16265' => 'sgi', 'SEGI_18569' => 'sgi', 'SEGI_20351' => 'sgi', 'SEGI_26395' => 'sgi', 'SEGI_29469' => 'sgi', 'SEGI_34771' => 'sgi', 'SEGI_36769' => 'sgi', 'SEGI_37139' => 'sgi', 'SGA_v2.0_scaffold100G29687' => 'sas', 'SGA_v2.0_scaffold118G32472' => 'sas', 'SGA_v2.0_scaffold14G07051' => 'sas', 'SGA_v2.0_scaffold183G39845' => 'sas', 'SGA_v2.0_scaffold1G00174' => 'sas', 'SGA_v2.0_scaffold22G09714' => 'sas', 'SGA_v2.0_scaffold333G48992' => 'sas', 'SGA_v2.0_scaffold46G17491' => 'sas', 'SGA_v2.0_scaffold49G18294' => 'sas', 'SGA_v2.0_scaffold63G21658' => 'sas', 'SHI01741' => 'shi', 'SHI05771' => 'shi', 'SHI18077' => 'shi', 'SHI20525' => 'shi', 'SHI20527' => 'shi', 'SHI20528' => 'shi', 'SMO172G0185' => 'smo', 'SMO198G0020' => 'smo', 'SMO351G0006' => 'smo', 'SMO356G0118' => 'smo', 'SMO358G0296' => 'smo', 'SMO367G0079' => 'smo', 'SMO367G1277' => 'smo', 'Solyc01g014220.3' => 'sly', 'Solyc01g111770.2' => 'sly', 'Solyc02g078180.3' => 'sly', 'Solyc03g006430.3' => 'sly', 'Solyc03g006456.1' => 'sly', 'Solyc03g079860.2' => 'sly', 'Solyc04g079770.3' => 'sly', 'Solyc05g007430.4' => 'sly', 'Solyc07g063150.3' => 'sly', 'Solyc08g016620.3' => 'sly', 'Solyc09g057590.3' => 'sly', 'Solyc09g057600.1' => 'sly', 'Solyc10g009050.3' => 'sly', 'Solyc11g017420.2' => 'sly', 'Sopen01g053810' => 'spe', 'Sopen02g023040' => 'spe', 'Sopen03g002440' => 'spe', 'Sopen04g033350' => 'spe', 'Sopen05g003310' => 'spe', 'Sopen07g004050' => 'spe', 'Sopen07g031340' => 'spe', 'Sopen08g006990' => 'spe', 'Sopen10g004830' => 'spe', 'Sopen11g009370' => 'spe', 'Sp1g24450' => 'spa', 'Sp1g29670' => 'spa', 'Sp1g39600' => 'spa', 'Sp2g11080' => 'spa', 'Sp2g13970' => 'spa', 'Sp4g16130' => 'spa', 'Sp6g13080' => 'spa', 'Sp7g37270' => 'spa', 'TAR371G0065' => 'tar', 'TAR376G0340' => 'tar', 'TAR376G0435' => 'tar', 'TAR381G0002' => 'tar', 'TAR381G1236' => 'tar', 'TAR624G0055' => 'tar', 'TAR624G0324' => 'tar', 'TAR624G0696' => 'tar', 'TAR624G0906' => 'tar', 'TAR625G0107' => 'tar', 'TAR626G0015' => 'tar', 'TAR626G1356' => 'tar', 'TAR627G0888' => 'tar', 'TAR628G0399' => 'tar', 'TAR628G1327' => 'tar', 'TAR629G2831' => 'tar', 'TAR629G2874' => 'tar', 'TAR633G1432' => 'tar', 'TAR633G2771' => 'tar', 'THA.LOC104803394' => 'tha', 'THA.LOC104805153' => 'tha', 'THA.LOC104806784' => 'tha', 'THA.LOC104810473' => 'tha', 'THA.LOC104813100' => 'tha', 'THA.LOC104814215' => 'tha', 'THA.LOC104815554' => 'tha', 'THA.LOC104820544' => 'tha', 'THA.LOC104824754' => 'tha', 'THA.LOC104827717' => 'tha', 'Thecc.02G031400' => 'tca', 'Thecc.02G055900' => 'tca', 'Thecc.02G350800' => 'tca', 'Thecc.06G150900' => 'tca', 'Thecc.06G186600' => 'tca', 'Thecc.07G089600' => 'tca', 'Thecc.08G020400' => 'tca', 'Thecc.08G182100' => 'tca', 'Thhalv10000873m.g' => 'esa', 'Thhalv10004185m.g' => 'esa', 'Thhalv10006981m.g' => 'esa', 'Thhalv10007204m.g' => 'esa', 'Thhalv10011374m.g' => 'esa', 'Thhalv10013482m.g' => 'esa', 'Thhalv10017801m.g' => 'esa', 'Thhalv10024983m.g' => 'esa', 'TPR.G12072' => 'tpr', 'TPR.G15769' => 'tpr', 'TPR.G16504' => 'tpr', 'TPR.G16506' => 'tpr', 'TPR.G24345' => 'tpr', 'TPR.G26666' => 'tpr', 'TPR.G27320' => 'tpr', 'TPR.G31819' => 'tpr', 'TPR.G38879' => 'tpr', 'TPR.G39015' => 'tpr', 'TPR.G8819' => 'tpr', 'TWI09G0924' => 'twi', 'TWI12G0811' => 'twi', 'TWI12G1294' => 'twi', 'TWI31G0150' => 'twi', 'TWI36G1262' => 'twi', 'TWI38G1287' => 'twi', 'TWI38G1633' => 'twi', 'TWI38G1982' => 'twi', 'TWI39G0116' => 'twi', 'TWI60G1011' => 'twi', 'TWI63G0171' => 'twi', 'TWI73G0839' => 'twi', 'TWI79G1511' => 'twi', 'unitig_0.g915' => 'ugi', 'unitig_0.g916' => 'ugi', 'unitig_21.g20219' => 'ugi', 'unitig_21.g20416' => 'ugi', 'unitig_578.g16132' => 'ugi', 'unitig_578.g16718' => 'ugi', 'unitig_62.g23481' => 'ugi', 'unitig_744.g24535' => 'ugi', 'unitig_749.g13525' => 'ugi', 'vmacro01248' => 'vma', 'vmacro02290' => 'vma', 'vmacro10946' => 'vma', 'vmacro11865' => 'vma', 'vmacro12493' => 'vma', 'vmacro17322' => 'vma', 'vmacro21599' => 'vma', 'vmacro23041' => 'vma', 'VMungo0251G0004' => 'vmu', 'VMungo0251G2639' => 'vmu', 'VMungo0251G2967' => 'vmu', 'VMungo0540G0864' => 'vmu', 'VMungo0540G1569' => 'vmu', 'VMungo0647G0317' => 'vmu', 'VMungo0720G1373' => 'vmu', 'VMungo0720G1508' => 'vmu', 'VMungo1080G0485' => 'vmu', 'VMungo1215G3177' => 'vmu', 'Zm00001eb112600' => 'zma', 'Zm00001eb120220' => 'zma', 'Zm00001eb153240' => 'zma', 'Zm00001eb168880' => 'zma', 'Zm00001eb213920' => 'zma', 'Zm00001eb228280' => 'zma', 'Zm00001eb254580' => 'zma', 'Zm00001eb272180' => 'zma', 'Zm00001eb293190' => 'zma', 'Zm00001eb322930' => 'zma', 'Zm00001eb353360' => 'zma', 'Zm00001eb353390' => 'zma', 'Zm00001eb353430' => 'zma', 'Zm00001eb353440' => 'zma', 'Zm00001eb353780' => 'zma' ) $gf_id = 'HOM05D000499' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000499' ) $data_identifier = 'HOM05D000499' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 29, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 12, 'amhyb' => (int) 8, 'aly' => (int) 12, 'aox' => (int) 9, 'arhy' => (int) 26, 'ath' => (int) 8, 'atr' => (int) 7, 'acertr' => (int) 10, 'cqu' => (int) 15, 'bca' => (int) 29, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 11, 'cansat' => (int) 8, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 9, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 8, 'cpa' => (int) 10, 'csa' => (int) 7, 'camsi' => (int) 20, 'dca' => (int) 8, 'din' => (int) 12, 'dzi' => (int) 14, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 6, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 38, 'gra' => (int) 16, 'vvi' => (int) 8, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 5, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 11, 'lja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 11, 'mpo' => (int) 3, 'mbi' => (int) 14, 'mdo' => (int) 14, 'mtr' => (int) 8, 'cme' => (int) 9, 'egut' => (int) 9, 'ama' => (int) 11, 'nta' => (int) 17, 'nnu' => (int) 11, 'oeu' => (int) 18, 'osa' => (int) 8, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 6, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 9, 'rsi' => (int) 9, 'sbr' => (int) 10, 'sbo' => (int) 8, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 10, 'sas' => (int) 10, 'shi' => (int) 6, 'smo' => (int) 7, 'sly' => (int) 14, 'spe' => (int) 10, 'spa' => (int) 8, 'tar' => (int) 19, 'tha' => (int) 10, 'tca' => (int) 8, 'esa' => (int) 8, 'tpr' => (int) 11, 'twi' => (int) 13, 'ugi' => (int) 9, 'vma' => (int) 8, 'vmu' => (int) 10, 'zma' => (int) 15 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb353780' $species_info = array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ) $local_species = 'gma' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000499', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1066', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p29780' => 'bna', 'A02p33180' => 'bna', 'A03p16470' => 'bna', 'A03p66010' => 'bna', 'A04p25970' => 'bna', 'A06p01270' => 'bna', 'A06p46080' => 'bna', 'A07p11400' => 'bna', 'A08p01840' => 'bna', 'A08p08230' => 'bna', 'A08p25740' => 'bna', 'A09p32070' => 'bna', 'A09p37830' => 'bna', 'A09p42840' => 'bna', 'A09p42850' => 'bna', 'Aa31LG10G2060' => 'aar', 'Aa31LG2G7410' => 'aar', 'Aa31LG6G10200' => 'aar', 'Aa31LG6G16680' => 'aar', 'Aa31LG6G8470' => 'aar', 'Aa31LG9G12730' => 'aar', 'Aa31LG9G13680' => 'aar', 'Aa31LG9G14920' => 'aar', 'Aa31LG9G6650' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4977' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5467' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3254' => 'aag', 'Actinidia02578' => 'ach', 'Actinidia07693' => 'ach', 'Actinidia08413' => 'ach', 'Actinidia08414' => 'ach', 'Actinidia15289' => 'ach', 'Actinidia19871' => 'ach', 'Actinidia21475' => 'ach', 'Actinidia22576' => 'ach', 'Actinidia28327' => 'ach', 'Actinidia32491' => 'ach', 'Actinidia39463' => 'ach', 'Actinidia39571' => 'ach', 'Ah.01g013750' => 'amhyb', 'Ah.01g023210' => 'amhyb', 'Ah.04g164850' => 'amhyb', 'Ah.05g178060' => 'amhyb', 'Ah.07g204270' => 'amhyb', 'Ah.07g208480' => 'amhyb', 'Ah.09g237410' => 'amhyb', 'Ah.14g089460' => 'amhyb', 'AL1G41790' => 'aly', 'AL1G49050' => 'aly', 'AL1G53810' => 'aly', 'AL1G61400' => 'aly', 'AL4G18580' => 'aly', 'AL5G12510' => 'aly', 'AL5G12540' => 'aly', 'AL6G43230' => 'aly', 'AL7G10370' => 'aly', 'AL7G19250' => 'aly', 'AL8G12240' => 'aly', 'AL8G18540' => 'aly', 'Aqoxy1G02409' => 'aox', 'Aqoxy2G03993' => 'aox', 'Aqoxy3G03357' => 'aox', 'Aqoxy4G00785' => 'aox', 'Aqoxy5G02598' => 'aox', 'Aqoxy6G00132' => 'aox', 'Aqoxy7G01776' => 'aox', 'Aqoxy7G02316' => 'aox', 'Aqoxy7G03973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.12AFKW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B8730' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27IQR1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3F75VG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3RE0GA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41TCQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.527VTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FIR39' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5W8UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DA38EV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ63HS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H1I32C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HC27T5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4M8AP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7N3CZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9UVDZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LS1NQA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT1D4B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SKC4TM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCFV76' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF9Q1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQWD9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1ZM88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WE07RT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YCK7VH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJE6Q6' => 'arhy', 'AT1G28240' => 'ath', 'AT1G34550' => 'ath', 'AT1G53040' => 'ath', 'AT2G02910' => 'ath', 'AT4G09630' => 'ath', 'AT4G38500' => 'ath', 'AT5G42660' => 'ath', 'AT5G46220' => 'ath', 'ATR0152G026' => 'atr', 'ATR0564G343' => 'atr', 'ATR0706G151' => 'atr', 'ATR0733G207' => 'atr', 'ATR0751G234' => 'atr', 'ATR0807G048' => 'atr', 'ATR1091G084' => 'atr', 'Atru.chr10.1229' => 'acertr', 'Atru.chr10.1230' => 'acertr', 'Atru.chr10.1874' => 'acertr', 'Atru.chr11.1808' => 'acertr', 'Atru.chr13.1795' => 'acertr', 'Atru.chr13.570' => 'acertr', 'Atru.chr2.2608' => 'acertr', 'Atru.chr2.2609' => 'acertr', 'Atru.chr5.3428' => 'acertr', 'Atru.chr8.1171' => 'acertr', 'AUR62004651' => 'cqu', 'AUR62008675' => 'cqu', 'AUR62010014' => 'cqu', 'AUR62013004' => 'cqu', 'AUR62014825' => 'cqu', 'AUR62015015' => 'cqu', 'AUR62015151' => 'cqu', 'AUR62017020' => 'cqu', 'AUR62019422' => 'cqu', 'AUR62023570' => 'cqu', 'AUR62025571' => 'cqu', 'AUR62029098' => 'cqu', 'AUR62033863' => 'cqu', 'AUR62034296' => 'cqu', 'AUR62040075' => 'cqu', 'BcaB02g07334' => 'bca', 'BcaB02g10575' => 'bca', 'BcaB03g12119' => 'bca', 'BcaB03g12120' => 'bca', 'BcaB03g13945' => 'bca', 'BcaB04g17123' => 'bca', 'BcaB04g17867' => 'bca', 'BcaB04g19839' => 'bca', 'BcaB07g30317' => 'bca', 'BcaB07g32432' => 'bca', 'BcaB07g33362' => 'bca', 'BcaB08g36611' => 'bca', 'BcaC01g00028' => 'bca', 'BcaC01g01356' => 'bca', 'BcaC01g02034' => 'bca', 'BcaC01g06051' => 'bca', 'BcaC03g16839' => 'bca', 'BcaC03g17176' => 'bca', 'BcaC05g26829' => 'bca', 'BcaC06g31490' => 'bca', 'BcaC06g35344' => 'bca', 'BcaC06g36570' => 'bca', 'BcaC07g37537' => 'bca', 'BcaC08g43491' => 'bca', 'BcaC08g43773' => 'bca', 'BcaNung00234' => 'bca', 'BcaNung01982' => 'bca', 'BcaNung03707' => 'bca', 'BcaNung06454' => 'bca', 'BolC2t10762H' => 'bol', 'BolC2t11191H' => 'bol', 'BolC3t14322H' => 'bol', 'BolC3t19747H' => 'bol', 'BolC3t21425H' => 'bol', 'BolC4t27800H' => 'bol', 'BolC5t31423H' => 'bol', 'BolC6t35951H' => 'bol', 'BolC6t36282H' => 'bol', 'BolC7t40678H' => 'bol', 'BolC7t40679H' => 'bol', 'BolC7t42222H' => 'bol', 'BolC7t43492H' => 'bol', 'BolC7t46785H' => 'bol', 'BolC8t47853H' => 'bol', 'BolC9t56805H' => 'bol', 'BraA02t08000Z' => 'bra', 'BraA02t08341Z' => 'bra', 'BraA03t10936Z' => 'bra', 'BraA03t15657Z' => 'bra', 'BraA04t18100Z' => 'bra', 'BraA05t20523Z' => 'bra', 'BraA06t23353Z' => 'bra', 'BraA06t27473Z' => 'bra', 'BraA06t27769Z' => 'bra', 'BraA07t28928Z' => 'bra', 'BraA08t32236Z' => 'bra', 'BraA08t32841Z' => 'bra', 'BraA08t34524Z' => 'bra', 'BraA09t38742Z' => 'bra', 'BraA09t39295Z' => 'bra', 'C02p47180' => 'bna', 'C02p50990' => 'bna', 'C03p19360' => 'bna', 'C03p74950' => 'bna', 'C03p91000' => 'bna', 'C04p63260' => 'bna', 'C05p27050' => 'bna', 'C06p08750' => 'bna', 'C06p11490' => 'bna', 'C07p02820' => 'bna', 'C07p17180' => 'bna', 'C07p29440' => 'bna', 'C07p63730' => 'bna', 'C09p39260' => 'bna', 'CAN.G1164.34' => 'can', 'CAN.G1164.39' => 'can', 'CAN.G1530.3' => 'can', 'CAN.G162.61' => 'can', 'CAN.G176.6' => 'can', 'CAN.G289.49' => 'can', 'CAN.G370.21' => 'can', 'CAN.G370.22' => 'can', 'CAN.G371.117' => 'can', 'CAN.G58.37' => 'can', 'CAN.G588.98' => 'can', 'CANSAT21G2266' => 'cansat', 'CANSAT25G2799' => 'cansat', 'CANSAT35G0862' => 'cansat', 'CANSAT35G1704' => 'cansat', 'CANSAT35G1760' => 'cansat', 'CANSAT56G3971' => 'cansat', 'CANSAT56G4116' => 'cansat', 'CANSAT80G1259' => 'cansat', 'CARHR027730' => 'chi', 'CARHR033880' => 'chi', 'CARHR043270' => 'chi', 'CARHR145330' => 'chi', 'CARHR145340' => 'chi', 'CARHR175570' => 'chi', 'CARHR181570' => 'chi', 'CARHR258470' => 'chi', 'CARHR260490' => 'chi', 'CARHR294220' => 'chi', 'Carub.0001s2668' => 'cru', 'Carub.0001s3257' => 'cru', 'Carub.0001s4220' => 'cru', 'Carub.0005s0179' => 'cru', 'Carub.0006s2807' => 'cru', 'Carub.0007s0039' => 'cru', 'Carub.0008s0169' => 'cru', 'Carub.0008s0636' => 'cru', 'Ca_00338_v3' => 'car', 'Ca_00542_v3' => 'car', 'Ca_01844_v3' => 'car', 'Ca_10611_v3' => 'car', 'Ca_13326_v3' => 'car', 'Ca_17944_v3' => 'car', 'Ca_18546_v3' => 'car', 'Ca_24219_v3' => 'car', 'Ca_29972_v3' => 'car', 'CBR_g3681' => 'cbr', 'CBR_g40021' => 'cbr', 'Cc01_g08140' => 'ccan', 'Cc02_g13410' => 'ccan', 'Cc02_g37480' => 'ccan', 'Cc05_g12030' => 'ccan', 'Cc09_g03370' => 'ccan', 'Cc09_g10300' => 'ccan', 'Cc10_g03530' => 'ccan', 'Cc10_g11380' => 'ccan', 'CDE01G0176' => 'cde', 'CDE02G0675' => 'cde', 'CDE02G0942' => 'cde', 'CDE02G1153' => 'cde', 'CDE02G4177' => 'cde', 'CDE04G2117' => 'cde', 'CDE04G2736' => 'cde', 'CDE08G1161' => 'cde', 'CDE09G1238' => 'cde', 'Cfa000467' => 'cfa', 'Cfa000947' => 'cfa', 'Cfa004969' => 'cfa', 'Cfa005284' => 'cfa', 'Cfa008993' => 'cfa', 'Cfa018187' => 'cfa', 'Cfa018454' => 'cfa', 'Cfa020585' => 'cfa', 'Ciclev10000424m.g' => 'ccl', 'Ciclev10003605m.g' => 'ccl', 'Ciclev10007828m.g' => 'ccl', 'Ciclev10014620m.g' => 'ccl', 'Ciclev10015169m.g' => 'ccl', 'Ciclev10018291m.g' => 'ccl', 'Ciclev10028256m.g' => 'ccl', 'Ciclev10033822m.g' => 'ccl', 'CiPaw.05G060300' => 'cil', 'CiPaw.05G085000' => 'cil', 'CiPaw.06G083700' => 'cil', 'CiPaw.06G120300' => 'cil', 'CiPaw.09G060500' => 'cil', 'CiPaw.09G123800' => 'cil', 'CiPaw.11G169700' => 'cil', 'CiPaw.12G118300' => 'cil', 'CiPaw.15G071000' => 'cil', 'CiPaw.15G081900' => 'cil', 'ClCG01G024610' => 'cla', 'ClCG03G006070' => 'cla', 'ClCG05G019250' => 'cla', 'ClCG09G009500' => 'cla', 'ClCG11G008200' => 'cla', 'ClCG11G018080' => 'cla', 'COL.COLO4_17373' => 'col', 'COL.COLO4_22994' => 'col', 'COL.COLO4_26389' => 'col', 'COL.COLO4_27170' => 'col', 'COL.COLO4_31074' => 'col', 'COL.COLO4_31465' => 'col', 'COL.COLO4_36438' => 'col', 'COL.COLO4_36439' => 'col', 'Cpa.g.c38781' => 'cpa', 'Cpa.g.sc128.12' => 'cpa', 'Cpa.g.sc166.7' => 'cpa', 'Cpa.g.sc166.8' => 'cpa', 'Cpa.g.sc20.111' => 'cpa', 'Cpa.g.sc27.31' => 'cpa', 'Cpa.g.sc64.36' => 'cpa', 'Cpa.g.sc64.37' => 'cpa', 'Cpa.g.sc66.49' => 'cpa', 'Cpa.g.sc80.64' => 'cpa', 'CsaV3_1G012320' => 'csa', 'CsaV3_2G008480' => 'csa', 'CsaV3_2G033450' => 'csa', 'CsaV3_3G044830' => 'csa', 'CsaV3_4G033710' => 'csa', 'CsaV3_6G051730' => 'csa', 'CsaV3_7G025350' => 'csa', 'CSS0001067' => 'camsi', 'CSS0005996' => 'camsi', 'CSS0006590' => 'camsi', 'CSS0009673' => 'camsi', 'CSS0010201' => 'camsi', 'CSS0010549' => 'camsi', 'CSS0011364' => 'camsi', 'CSS0014473' => 'camsi', 'CSS0014961' => 'camsi', 'CSS0020191' => 'camsi', 'CSS0021165' => 'camsi', 'CSS0022306' => 'camsi', 'CSS0030591' => 'camsi', 'CSS0030696' => 'camsi', 'CSS0032653' => 'camsi', 'CSS0037487' => 'camsi', 'CSS0041102' => 'camsi', 'CSS0041261' => 'camsi', 'CSS0046246' => 'camsi', 'CSS0049256' => 'camsi', 'DCAR_004075' => 'dca', 'DCAR_011538' => 'dca', 'DCAR_019553' => 'dca', 'DCAR_020952' => 'dca', 'DCAR_021739' => 'dca', 'DCAR_027407' => 'dca', 'DCAR_027913' => 'dca', 'DCAR_028066' => 'dca', 'Dinv05899' => 'din', 'Dinv07563' => 'din', 'Dinv08010' => 'din', 'Dinv14125' => 'din', 'Dinv20172' => 'din', 'Dinv30743' => 'din', 'Dinv31229' => 'din', 'Dinv34162' => 'din', 'Dinv36028' => 'din', 'Dinv39368' => 'din', 'Dinv40565' => 'din', 'Dinv41706' => 'din', 'Duzib052G0089' => 'dzi', 'Duzib116G0641' => 'dzi', 'Duzib132G0069' => 'dzi', 'Duzib132G1219' => 'dzi', 'Duzib147G0278' => 'dzi', 'Duzib160G0480' => 'dzi', 'Duzib170G0661' => 'dzi', 'Duzib177G0591' => 'dzi', 'Duzib187G1353' => 'dzi', 'Duzib192G0858' => 'dzi', 'Duzib192G0883' => 'dzi', 'Duzib213G0506' => 'dzi', 'Duzib235G0289' => 'dzi', 'Duzib251G0422' => 'dzi', 'ECA232G3898' => 'eca', 'ECA233G5950' => 'eca', 'ECA234G1699' => 'eca', 'ECA234G2421' => 'eca', 'ECA236G0426' => 'eca', 'ECA236G4331' => 'eca', 'ECA248G2573' => 'eca', 'EL10Ac1g00077' => 'bvu', 'EL10Ac1g01746' => 'bvu', 'EL10Ac2g03464' => 'bvu', 'EL10Ac4g08176' => 'bvu', 'EL10Ac7g17521' => 'bvu', 'EL10Ac8g20386' => 'bvu', 'EL10Ac9g21343' => 'bvu', 'EL10Ac9g22688' => 'bvu', 'Eucgr.B03434' => 'egr', 'Eucgr.D00618' => 'egr', 'Eucgr.E02395' => 'egr', 'Eucgr.F01129' => 'egr', 'Eucgr.F02622' => 'egr', 'Eucgr.F04207' => 'egr', 'FAN01G0570' => 'fan', 'FAN03G3351' => 'fan', 'FAN06G3702' => 'fan', 'FAN07G2149' => 'fan', 'FAN10G3758' => 'fan', 'FAN11G1170' => 'fan', 'FAN11G2050' => 'fan', 'FAN11G2724' => 'fan', 'FAN12G1700' => 'fan', 'FAN12G2028' => 'fan', 'FAN15G1160' => 'fan', 'FAN15G3063' => 'fan', 'FAN16G2540' => 'fan', 'FAN16G3077' => 'fan', 'FAN16G3624' => 'fan', 'FAN17G0221' => 'fan', 'FAN20G2492' => 'fan', 'FAN20G2905' => 'fan', 'FAN21G0548' => 'fan', 'FAN21G1300' => 'fan', 'FAN22G0077' => 'fan', 'FAN22G1315' => 'fan', 'FAN24G1280' => 'fan', 'FAN24G1445' => 'fan', 'FAN24G3527' => 'fan', 'FAN25G0464' => 'fan', 'FAN25G2885' => 'fan', 'FAN25G3270' => 'fan', 'FAN27G1101' => 'fan', 'FAN27G2846' => 'fan', 'FAN27G3524' => 'fan', 'FvH4_2g11770' => 'fve', 'FvH4_2g15630' => 'fve', 'FvH4_3g05570' => 'fve', 'FvH4_3g09110' => 'fve', 'FvH4_3g19940' => 'fve', 'FvH4_4g04821' => 'fve', 'FvH4_4g31480' => 'fve', 'FvH4_7g01740' => 'fve', 'Glyma.05G130400' => 'gma', 'Glyma.05G156400' => 'gma', 'Glyma.07G197000' => 'gma', 'Glyma.08G085151' => 'gma', 'Glyma.08G114500' => 'gma', 'Glyma.08G300400' => 'gma', 'Glyma.10G215800' => 'gma', 'Glyma.12G224400' => 'gma', 'Glyma.13G179300' => 'gma', 'Glyma.13G218151' => 'gma', 'Glyma.13G238800' => 'gma', 'Glyma.13G276900' => 'gma', 'Glyma.14G078200' => 'gma', 'Glyma.15G074500' => 'gma', 'Glyma.15G094100' => 'gma', 'Glyma.17G247200' => 'gma', 'Glyma.18G120100' => 'gma', 'Glyma.20G176000' => 'gma', 'Gohir.A01G063600' => 'ghi', 'Gohir.A01G170301' => 'ghi', 'Gohir.A02G060500' => 'ghi', 'Gohir.A05G133850' => 'ghi', 'Gohir.A05G161400' => 'ghi', 'Gohir.A06G012900' => 'ghi', 'Gohir.A06G035901' => 'ghi', 'Gohir.A06G127100' => 'ghi', 'Gohir.A06G210500' => 'ghi', 'Gohir.A08G008650' => 'ghi', 'Gohir.A09G072700' => 'ghi', 'Gohir.A09G088301' => 'ghi', 'Gohir.A10G040600' => 'ghi', 'Gohir.A12G036300' => 'ghi', 'Gohir.A12G143350' => 'ghi', 'Gohir.A12G165500' => 'ghi', 'Gohir.A13G145700' => 'ghi', 'Gohir.D01G050000' => 'ghi', 'Gohir.D01G051366' => 'ghi', 'Gohir.D01G161350' => 'ghi', 'Gohir.D02G065900' => 'ghi', 'Gohir.D05G164200' => 'ghi', 'Gohir.D05G355500' => 'ghi', 'Gohir.D06G010400' => 'ghi', 'Gohir.D06G111250' => 'ghi', 'Gohir.D06G132000' => 'ghi', 'Gohir.D06G210500' => 'ghi', 'Gohir.D07G165675' => 'ghi', 'Gohir.D08G062240' => 'ghi', 'Gohir.D08G086101' => 'ghi', 'Gohir.D08G138060' => 'ghi', 'Gohir.D09G072300' => 'ghi', 'Gohir.D10G041400' => 'ghi', 'Gohir.D11G191020' => 'ghi', 'Gohir.D11G212066' => 'ghi', 'Gohir.D12G036300' => 'ghi', 'Gohir.D12G168600' => 'ghi', 'Gohir.D13G150600' => 'ghi', 'Gorai.001G057300' => 'gra', 'Gorai.002G069900' => 'gra', 'Gorai.002G200000' => 'gra', 'Gorai.003G067600' => 'gra', 'Gorai.005G074800' => 'gra', 'Gorai.006G087300' => 'gra', 'Gorai.008G037500' => 'gra', 'Gorai.008G181400' => 'gra', 'Gorai.009G169400' => 'gra', 'Gorai.009G387900' => 'gra', 'Gorai.010G013300' => 'gra', 'Gorai.010G153800' => 'gra', 'Gorai.010G255800' => 'gra', 'Gorai.011G043700' => 'gra', 'Gorai.011G198900' => 'gra', 'Gorai.013G168400' => 'gra', 'GSVIVG01005212001' => 'vvi', 'GSVIVG01006163001' => 'vvi', 'GSVIVG01009625001' => 'vvi', 'GSVIVG01014338001' => 'vvi', 'GSVIVG01020005001' => 'vvi', 'GSVIVG01021450001' => 'vvi', 'GSVIVG01023975001' => 'vvi', 'GSVIVG01034490001' => 'vvi', 'HanXRQChr04g0112071' => 'han', 'HanXRQChr05g0131151' => 'han', 'HanXRQChr09g0262371' => 'han', 'HanXRQChr09g0268401' => 'han', 'HanXRQChr10g0279241' => 'han', 'HanXRQChr10g0297961' => 'han', 'HanXRQChr11g0326231' => 'han', 'HanXRQChr11g0328471' => 'han', 'HanXRQChr16g0507941' => 'han', 'HanXRQChr17g0560211' => 'han', 'Haze_02108' => 'cav', 'Haze_02428' => 'cav', 'Haze_05593' => 'cav', 'Haze_06448' => 'cav', 'Haze_09427' => 'cav', 'Haze_12022' => 'cav', 'Haze_17612' => 'cav', 'Haze_17928' => 'cav', 'Hma1.2p1_0032F.1_g019250' => 'hma', 'Hma1.2p1_0163F.1_g072690' => 'hma', 'Hma1.2p1_0265F.1_g106710' => 'hma', 'Hma1.2p1_0286F.1_g113970' => 'hma', 'Hma1.2p1_0363F.1_g136640' => 'hma', 'Hma1.2p1_0584F.1_g183470' => 'hma', 'Hma1.2p1_0885F.1_g232570' => 'hma', 'HPP92_006022' => 'vpl', 'HPP92_007320' => 'vpl', 'HPP92_011521' => 'vpl', 'HPP92_019387' => 'vpl', 'HPP92_024038' => 'vpl', 'Hund05891' => 'sun', 'Hund06450' => 'sun', 'Hund12053' => 'sun', 'Hund16800' => 'sun', 'Hund21222' => 'sun', 'Hund22896' => 'sun', 'Hund23746' => 'sun', 'Hund27083' => 'sun', 'Lalb_Chr02g0141831' => 'lal', 'Lalb_Chr02g0141841' => 'lal', 'Lalb_Chr05g0220411' => 'lal', 'Lalb_Chr06g0162081' => 'lal', 'Lalb_Chr09g0327651' => 'lal', 'Lalb_Chr13g0295051' => 'lal', 'Lalb_Chr15g0086801' => 'lal', 'Lalb_Chr16g0383781' => 'lal', 'Lalb_Chr16g0383791' => 'lal', 'Lalb_Chr18g0055441' => 'lal', 'Lalb_Chr18g0059611' => 'lal', 'Lalb_Chr20g0109661' => 'lal', 'Lalb_Chr20g0109831' => 'lal', 'Lalb_Chr20g0121871' => 'lal', 'Lalb_Chr22g0355361' => 'lal', 'Lalb_Chr25g0286371' => 'lal', 'Lj1A1187G43' => 'lonja', 'Lj1A1205T50' => 'lonja', 'Lj1A800G33' => 'lonja', 'Lj1C1187T7' => 'lonja', 'Lj1C843T11' => 'lonja', 'Lj1g0010940' => 'lja', 'Lj2A288T69' => 'lonja', 'Lj3g0024276' => 'lja', 'Lj4A47T76' => 'lonja', 'Lj4g0005805' => 'lja', 'Lj4g0006097' => 'lja', 'Lj4g0008528' => 'lja', 'Lj4g0024907' => 'lja', 'Lj5g0012472' => 'lja', 'Lj5g0018648' => 'lja', 'Lj6C789G1' => 'lonja', 'Lj6g0004000' => 'lja', 'Lj7A292G67' => 'lonja', 'Lj7A292T64' => 'lonja', 'Lj9A400T58' => 'lonja', 'Lsat_1_v5_gn_1_126181' => 'lsa', 'Lsat_1_v5_gn_4_123041' => 'lsa', 'Lsat_1_v5_gn_4_133620' => 'lsa', 'Lsat_1_v5_gn_4_53221' => 'lsa', 'Lsat_1_v5_gn_4_71961' => 'lsa', 'Lsat_1_v5_gn_7_105241' => 'lsa', 'Lsat_1_v5_gn_7_21361' => 'lsa', 'Lsat_1_v5_gn_7_28860' => 'lsa', 'Lsat_1_v5_gn_7_31260' => 'lsa', 'Lsat_1_v5_gn_8_52801' => 'lsa', 'Manes.02G191400' => 'mes', 'Manes.03G110100' => 'mes', 'Manes.04G071100' => 'mes', 'Manes.05G100500' => 'mes', 'Manes.05G164700' => 'mes', 'Manes.15G087000' => 'mes', 'Manes.15G121500' => 'mes', 'Manes.16G028300' => 'mes', 'Manes.17G046100' => 'mes', 'Manes.17G069800' => 'mes', 'Manes.18G100500' => 'mes', 'Mapoly0002s0109' => 'mpo', 'Mapoly0024s0007' => 'mpo', 'Mapoly0089s0032' => 'mpo', 'MBI04_g42241_MAGBIO' => 'mbi', 'MBI05_g11988_MAGBIO' => 'mbi', 'MBI05_g35452_MAGBIO' => 'mbi', 'MBI07_g30179_MAGBIO' => 'mbi', 'MBI07_g35859_MAGBIO' => 'mbi', 'MBI07_g35860_MAGBIO' => 'mbi', 'MBI07_g37166_MAGBIO' => 'mbi', 'MBI08_g18172_MAGBIO' => 'mbi', 'MBI09_g08441_MAGBIO' => 'mbi', 'MBI13_g01676_MAGBIO' => 'mbi', 'MBI14_g42955_MAGBIO' => 'mbi', 'MBI16_g13161_MAGBIO' => 'mbi', 'MBI17_g27204_MAGBIO' => 'mbi', 'MBI19_g21595_MAGBIO' => 'mbi', 'MD00G1148400' => 'mdo', 'MD02G1301200' => 'mdo', 'MD03G1227800' => 'mdo', 'MD05G1041100' => 'mdo', 'MD05G1124800' => 'mdo', 'MD05G1284000' => 'mdo', 'MD05G1338800' => 'mdo', 'MD05G1338900' => 'mdo', 'MD07G1022800' => 'mdo', 'MD10G1047500' => 'mdo', 'MD10G1127500' => 'mdo', 'MD10G1262300' => 'mdo', 'MD10G1293800' => 'mdo', 'MD16G1074300' => 'mdo', 'Medtr1g021670' => 'mtr', 'Medtr1g096320' => 'mtr', 'Medtr2g013690' => 'mtr', 'Medtr2g019450' => 'mtr', 'Medtr2g085170' => 'mtr', 'Medtr4g088785' => 'mtr', 'Medtr8g055930' => 'mtr', 'Medtr8g085850' => 'mtr', 'MELO3C002605.2' => 'cme', 'MELO3C003891.2' => 'cme', 'MELO3C004012.2' => 'cme', 'MELO3C007134.2' => 'cme', 'MELO3C008118.2' => 'cme', 'MELO3C016700.2' => 'cme', 'MELO3C024127.2' => 'cme', 'MELO3C033361.2' => 'cme', 'MELO3C033362.2' => 'cme', 'Migut.C00430' => 'egut', 'Migut.C01246' => 'egut', 'Migut.E00101' => 'egut', 'Migut.H01486' => 'egut', 'Migut.H01939' => 'egut', 'Migut.K00360' => 'egut', 'Migut.M00910' => 'egut', 'Migut.M01139' => 'egut', 'Migut.N02677' => 'egut', 'MSTRG.13252' => 'ama', 'MSTRG.14701' => 'ama', 'MSTRG.1521' => 'ama', 'MSTRG.15884' => 'ama', 'MSTRG.16242' => 'ama', 'MSTRG.22285' => 'ama', 'MSTRG.22444' => 'ama', 'MSTRG.2349' => 'ama', 'MSTRG.26308' => 'ama', 'MSTRG.28296' => 'ama', 'MSTRG.9895' => 'ama', 'Nitab4.5_0000110g0060' => 'nta', 'Nitab4.5_0000420g0130' => 'nta', 'Nitab4.5_0000422g0030' => 'nta', 'Nitab4.5_0000560g0180' => 'nta', 'Nitab4.5_0000703g0100' => 'nta', 'Nitab4.5_0000786g0200' => 'nta', 'Nitab4.5_0001336g0020' => 'nta', 'Nitab4.5_0001796g0030' => 'nta', 'Nitab4.5_0003348g0060' => 'nta', 'Nitab4.5_0003698g0040' => 'nta', 'Nitab4.5_0003942g0090' => 'nta', 'Nitab4.5_0004775g0070' => 'nta', 'Nitab4.5_0004864g0030' => 'nta', 'Nitab4.5_0005615g0020' => 'nta', 'Nitab4.5_0009288g0030' => 'nta', 'Nitab4.5_0009341g0010' => 'nta', 'Nitab4.5_0009535g0010' => 'nta', 'Nn1g03995' => 'nnu', 'Nn1g04100' => 'nnu', 'Nn1g06530' => 'nnu', 'Nn3g16404' => 'nnu', 'Nn3g17212' => 'nnu', 'Nn3g20776' => 'nnu', 'Nn3g21923' => 'nnu', 'Nn5g27737' => 'nnu', 'Nn5g29461' => 'nnu', 'Nn7g38355' => 'nnu', 'Nn8g39873' => 'nnu', 'Oeu000548.2' => 'oeu', 'Oeu004672.1' => 'oeu', 'Oeu015605.2' => 'oeu', 'Oeu016092.1' => 'oeu', 'Oeu017879.3' => 'oeu', 'Oeu024910.1' => 'oeu', 'Oeu028965.1' => 'oeu', 'Oeu031269.1' => 'oeu', 'Oeu031270.1' => 'oeu', 'Oeu032535.1' => 'oeu', 'Oeu034151.1' => 'oeu', 'Oeu034152.1' => 'oeu', 'Oeu034588.2' => 'oeu', 'Oeu050846.1' => 'oeu', 'Oeu050849.2' => 'oeu', 'Oeu051063.2' => 'oeu', 'Oeu052368.1' => 'oeu', 'Oeu052370.1' => 'oeu', 'Os01g0210400' => 'osa', 'Os01g0304300' => 'osa', 'Os01g0749100' => 'osa', 'Os02g0745800' => 'osa', 'Os03g0769050' => 'osa', 'Os05g0531500' => 'osa', 'Os06g0724300' => 'osa', 'Os11g0198100' => 'osa', 'Peaxi162Scf00069g01425' => 'pax', 'Peaxi162Scf00280g00811' => 'pax', 'Peaxi162Scf00310g00615' => 'pax', 'Peaxi162Scf00362g00542' => 'pax', 'Peaxi162Scf00461g00310' => 'pax', 'Peaxi162Scf00530g00118' => 'pax', 'Peaxi162Scf00541g00057' => 'pax', 'Peaxi162Scf00661g00017' => 'pax', 'Peaxi162Scf00926g00027' => 'pax', 'Peaxi162Scf01064g00263' => 'pax', 'Peaxi162Scf01211g00135' => 'pax', 'PGR004G2336' => 'pgr', 'PGR042G0327' => 'pgr', 'PGR042G1957' => 'pgr', 'PGR042G2003' => 'pgr', 'PGR042G3929' => 'pgr', 'PGR083G1137' => 'pgr', 'PGR083G1364' => 'pgr', 'PGSC0003DMG400003381' => 'stu', 'PGSC0003DMG400003417' => 'stu', 'PGSC0003DMG400008981' => 'stu', 'PGSC0003DMG400012417' => 'stu', 'PGSC0003DMG400012823' => 'stu', 'PGSC0003DMG400016885' => 'stu', 'PGSC0003DMG400022812' => 'stu', 'PGSC0003DMG400029726' => 'stu', 'PGSC0003DMG401009243' => 'stu', 'PGSC0003DMG401031505' => 'stu', 'PGSC0003DMG402031505' => 'stu', 'Phvul.001G017600' => 'pvu', 'Phvul.002G193500' => 'pvu', 'Phvul.002G228900' => 'pvu', 'Phvul.002G236800' => 'pvu', 'Phvul.003G049500' => 'pvu', 'Phvul.005G072000' => 'pvu', 'Phvul.006G164800' => 'pvu', 'Phvul.006G185100' => 'pvu', 'Phvul.007G090000' => 'pvu', 'Potri.001G399800' => 'ptr', 'Potri.002G149900' => 'ptr', 'Potri.004G044100' => 'ptr', 'Potri.004G177600' => 'ptr', 'Potri.009G138000' => 'ptr', 'Potri.010G094000' => 'ptr', 'Potri.011G053000' => 'ptr', 'Potri.011G119300' => 'ptr', 'Potri.013G113700' => 'ptr', 'Potri.018G107800' => 'ptr', 'Potri.019G084100' => 'ptr', 'Pp3c14_23720' => 'ppa', 'Pp3c16_6340' => 'ppa', 'Pp3c23_13420' => 'ppa', 'Pp3c24_2740' => 'ppa', 'Pp3c25_860' => 'ppa', 'Pp3c8_21750' => 'ppa', 'Prupe.1G273000' => 'ppe', 'Prupe.1G273700' => 'ppe', 'Prupe.1G274100' => 'ppe', 'Prupe.2G023300' => 'ppe', 'Prupe.4G048000' => 'ppe', 'Prupe.4G080400' => 'ppe', 'Prupe.4G181200' => 'ppe', 'Prupe.8G056900' => 'ppe', 'Prupe.8G168700' => 'ppe', 'Psat1g189080' => 'psa', 'Psat1g204760' => 'psa', 'Psat4g175560' => 'psa', 'Psat4g177720' => 'psa', 'Psat5g244240' => 'psa', 'Psat6g010720' => 'psa', 'Psat6g187200' => 'psa', 'Psat7g072040' => 'psa', 'PSO017G3501' => 'pso', 'PSO063G2148' => 'pso', 'PSO063G5608' => 'pso', 'PSO210G6392' => 'pso', 'PSO541G2319' => 'pso', 'PSO541G2836' => 'pso', 'PSO541G4012' => 'pso', 'PSO541G6253' => 'pso', 'PSO675G0580' => 'pso', 'PSO675G0856' => 'pso', 'PSO675G5635' => 'pso', 'PSO675G9157' => 'pso', 'PSO832G1660' => 'pso', 'PSO832G1969' => 'pso', 'QL02p007186' => 'qlo', 'QL02p033904' => 'qlo', 'QL03p064391' => 'qlo', 'QL05p040593' => 'qlo', 'QL05p058242' => 'qlo', 'QL08p021825' => 'qlo', 'QL11p004981' => 'qlo', 'RcHm_v2.0_Chr1g0318301' => 'rch', 'RcHm_v2.0_Chr4g0418501' => 'rch', 'RcHm_v2.0_Chr4g0439971' => 'rch', 'RcHm_v2.0_Chr5g0008541' => 'rch', 'RcHm_v2.0_Chr5g0014101' => 'rch', 'RcHm_v2.0_Chr5g0014131' => 'rch', 'RcHm_v2.0_Chr5g0033621' => 'rch', 'RcHm_v2.0_Chr6g0272041' => 'rch', 'RcHm_v2.0_Chr6g0278831' => 'rch', 'Rhsim02G0130400' => 'rsi', 'Rhsim02G0171100' => 'rsi', 'Rhsim05G0053000' => 'rsi', 'Rhsim05G0053100' => 'rsi', 'Rhsim06G0096500' => 'rsi', 'Rhsim06G0096600' => 'rsi', 'Rhsim06G0199100' => 'rsi', 'Rhsim12G0062300' => 'rsi', 'Rhsim12G0062800' => 'rsi', 'Sabra02G0118600' => 'sbr', 'Sabra04G0027300' => 'sbr', 'Sabra04G0119500' => 'sbr', 'Sabra08G0112500' => 'sbr', 'Sabra11G0036800' => 'sbr', 'Sabra11G0103800' => 'sbr', 'Sabra13G0096300' => 'sbr', 'Sabra16G0262300' => 'sbr', 'Sabra18G0091700' => 'sbr', 'Sabra19G0095400' => 'sbr', 'SalBow6G3080' => 'sbo', 'SalBow7G1157' => 'sbo', 'SalBow7G2123' => 'sbo', 'SalBow7G2285' => 'sbo', 'SalBow7G3537' => 'sbo', 'SalBow8G2947' => 'sbo', 'SalBow8G4463' => 'sbo', 'SalBow8G5466' => 'sbo', 'Sc01g0001750' => 'sci', 'Sc02g0006640' => 'sci', 'Sc02g0006670' => 'sci', 'Sc04g0008220' => 'sci', 'Sc05g0006190' => 'sci', 'Sc08g0002760' => 'sci', 'Sc17g0006170' => 'sci', 'Sc22g0002050' => 'sci', 'Sc23g0001190' => 'sci', 'Sc24g0000980' => 'sci', 'Sed0006245' => 'sed', 'Sed0007543' => 'sed', 'Sed0009411' => 'sed', 'Sed0010765' => 'sed', 'Sed0012944' => 'sed', 'Sed0014682' => 'sed', 'Sed0016174' => 'sed', 'Sed0016796' => 'sed', 'Sed0020317' => 'sed', 'Sed0021467' => 'sed', 'SEGI_01316' => 'sgi', 'SEGI_03374' => 'sgi', 'SEGI_16265' => 'sgi', 'SEGI_18569' => 'sgi', 'SEGI_20351' => 'sgi', 'SEGI_26395' => 'sgi', 'SEGI_29469' => 'sgi', 'SEGI_34771' => 'sgi', 'SEGI_36769' => 'sgi', 'SEGI_37139' => 'sgi', 'SGA_v2.0_scaffold100G29687' => 'sas', 'SGA_v2.0_scaffold118G32472' => 'sas', 'SGA_v2.0_scaffold14G07051' => 'sas', 'SGA_v2.0_scaffold183G39845' => 'sas', 'SGA_v2.0_scaffold1G00174' => 'sas', 'SGA_v2.0_scaffold22G09714' => 'sas', 'SGA_v2.0_scaffold333G48992' => 'sas', 'SGA_v2.0_scaffold46G17491' => 'sas', 'SGA_v2.0_scaffold49G18294' => 'sas', 'SGA_v2.0_scaffold63G21658' => 'sas', 'SHI01741' => 'shi', 'SHI05771' => 'shi', 'SHI18077' => 'shi', 'SHI20525' => 'shi', 'SHI20527' => 'shi', 'SHI20528' => 'shi', 'SMO172G0185' => 'smo', 'SMO198G0020' => 'smo', 'SMO351G0006' => 'smo', 'SMO356G0118' => 'smo', 'SMO358G0296' => 'smo', 'SMO367G0079' => 'smo', 'SMO367G1277' => 'smo', 'Solyc01g014220.3' => 'sly', 'Solyc01g111770.2' => 'sly', 'Solyc02g078180.3' => 'sly', 'Solyc03g006430.3' => 'sly', 'Solyc03g006456.1' => 'sly', 'Solyc03g079860.2' => 'sly', 'Solyc04g079770.3' => 'sly', 'Solyc05g007430.4' => 'sly', 'Solyc07g063150.3' => 'sly', 'Solyc08g016620.3' => 'sly', 'Solyc09g057590.3' => 'sly', 'Solyc09g057600.1' => 'sly', 'Solyc10g009050.3' => 'sly', 'Solyc11g017420.2' => 'sly', 'Sopen01g053810' => 'spe', 'Sopen02g023040' => 'spe', 'Sopen03g002440' => 'spe', 'Sopen04g033350' => 'spe', 'Sopen05g003310' => 'spe', 'Sopen07g004050' => 'spe', 'Sopen07g031340' => 'spe', 'Sopen08g006990' => 'spe', 'Sopen10g004830' => 'spe', 'Sopen11g009370' => 'spe', 'Sp1g24450' => 'spa', 'Sp1g29670' => 'spa', 'Sp1g39600' => 'spa', 'Sp2g11080' => 'spa', 'Sp2g13970' => 'spa', 'Sp4g16130' => 'spa', 'Sp6g13080' => 'spa', 'Sp7g37270' => 'spa', 'TAR371G0065' => 'tar', 'TAR376G0340' => 'tar', 'TAR376G0435' => 'tar', 'TAR381G0002' => 'tar', 'TAR381G1236' => 'tar', 'TAR624G0055' => 'tar', 'TAR624G0324' => 'tar', 'TAR624G0696' => 'tar', 'TAR624G0906' => 'tar', 'TAR625G0107' => 'tar', 'TAR626G0015' => 'tar', 'TAR626G1356' => 'tar', 'TAR627G0888' => 'tar', 'TAR628G0399' => 'tar', 'TAR628G1327' => 'tar', 'TAR629G2831' => 'tar', 'TAR629G2874' => 'tar', 'TAR633G1432' => 'tar', 'TAR633G2771' => 'tar', 'THA.LOC104803394' => 'tha', 'THA.LOC104805153' => 'tha', 'THA.LOC104806784' => 'tha', 'THA.LOC104810473' => 'tha', 'THA.LOC104813100' => 'tha', 'THA.LOC104814215' => 'tha', 'THA.LOC104815554' => 'tha', 'THA.LOC104820544' => 'tha', 'THA.LOC104824754' => 'tha', 'THA.LOC104827717' => 'tha', 'Thecc.02G031400' => 'tca', 'Thecc.02G055900' => 'tca', 'Thecc.02G350800' => 'tca', 'Thecc.06G150900' => 'tca', 'Thecc.06G186600' => 'tca', 'Thecc.07G089600' => 'tca', 'Thecc.08G020400' => 'tca', 'Thecc.08G182100' => 'tca', 'Thhalv10000873m.g' => 'esa', 'Thhalv10004185m.g' => 'esa', 'Thhalv10006981m.g' => 'esa', 'Thhalv10007204m.g' => 'esa', 'Thhalv10011374m.g' => 'esa', 'Thhalv10013482m.g' => 'esa', 'Thhalv10017801m.g' => 'esa', 'Thhalv10024983m.g' => 'esa', 'TPR.G12072' => 'tpr', 'TPR.G15769' => 'tpr', 'TPR.G16504' => 'tpr', 'TPR.G16506' => 'tpr', 'TPR.G24345' => 'tpr', 'TPR.G26666' => 'tpr', 'TPR.G27320' => 'tpr', 'TPR.G31819' => 'tpr', 'TPR.G38879' => 'tpr', 'TPR.G39015' => 'tpr', 'TPR.G8819' => 'tpr', 'TWI09G0924' => 'twi', 'TWI12G0811' => 'twi', 'TWI12G1294' => 'twi', 'TWI31G0150' => 'twi', 'TWI36G1262' => 'twi', 'TWI38G1287' => 'twi', 'TWI38G1633' => 'twi', 'TWI38G1982' => 'twi', 'TWI39G0116' => 'twi', 'TWI60G1011' => 'twi', 'TWI63G0171' => 'twi', 'TWI73G0839' => 'twi', 'TWI79G1511' => 'twi', 'unitig_0.g915' => 'ugi', 'unitig_0.g916' => 'ugi', 'unitig_21.g20219' => 'ugi', 'unitig_21.g20416' => 'ugi', 'unitig_578.g16132' => 'ugi', 'unitig_578.g16718' => 'ugi', 'unitig_62.g23481' => 'ugi', 'unitig_744.g24535' => 'ugi', 'unitig_749.g13525' => 'ugi', 'vmacro01248' => 'vma', 'vmacro02290' => 'vma', 'vmacro10946' => 'vma', 'vmacro11865' => 'vma', 'vmacro12493' => 'vma', 'vmacro17322' => 'vma', 'vmacro21599' => 'vma', 'vmacro23041' => 'vma', 'VMungo0251G0004' => 'vmu', 'VMungo0251G2639' => 'vmu', 'VMungo0251G2967' => 'vmu', 'VMungo0540G0864' => 'vmu', 'VMungo0540G1569' => 'vmu', 'VMungo0647G0317' => 'vmu', 'VMungo0720G1373' => 'vmu', 'VMungo0720G1508' => 'vmu', 'VMungo1080G0485' => 'vmu', 'VMungo1215G3177' => 'vmu', 'Zm00001eb112600' => 'zma', 'Zm00001eb120220' => 'zma', 'Zm00001eb153240' => 'zma', 'Zm00001eb168880' => 'zma', 'Zm00001eb213920' => 'zma', 'Zm00001eb228280' => 'zma', 'Zm00001eb254580' => 'zma', 'Zm00001eb272180' => 'zma', 'Zm00001eb293190' => 'zma', 'Zm00001eb322930' => 'zma', 'Zm00001eb353360' => 'zma', 'Zm00001eb353390' => 'zma', 'Zm00001eb353430' => 'zma', 'Zm00001eb353440' => 'zma', 'Zm00001eb353780' => 'zma' ), 'gf_id' => 'HOM05D000499', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000499' ), 'data_identifier' => 'HOM05D000499', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000499', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1066', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p29780' => 'bna', 'A02p33180' => 'bna', 'A03p16470' => 'bna', 'A03p66010' => 'bna', 'A04p25970' => 'bna', 'A06p01270' => 'bna', 'A06p46080' => 'bna', 'A07p11400' => 'bna', 'A08p01840' => 'bna', 'A08p08230' => 'bna', 'A08p25740' => 'bna', 'A09p32070' => 'bna', 'A09p37830' => 'bna', 'A09p42840' => 'bna', 'A09p42850' => 'bna', 'Aa31LG10G2060' => 'aar', 'Aa31LG2G7410' => 'aar', 'Aa31LG6G10200' => 'aar', 'Aa31LG6G16680' => 'aar', 'Aa31LG6G8470' => 'aar', 'Aa31LG9G12730' => 'aar', 'Aa31LG9G13680' => 'aar', 'Aa31LG9G14920' => 'aar', 'Aa31LG9G6650' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4977' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5467' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3254' => 'aag', 'Actinidia02578' => 'ach', 'Actinidia07693' => 'ach', 'Actinidia08413' => 'ach', 'Actinidia08414' => 'ach', 'Actinidia15289' => 'ach', 'Actinidia19871' => 'ach', 'Actinidia21475' => 'ach', 'Actinidia22576' => 'ach', 'Actinidia28327' => 'ach', 'Actinidia32491' => 'ach', 'Actinidia39463' => 'ach', 'Actinidia39571' => 'ach', 'Ah.01g013750' => 'amhyb', 'Ah.01g023210' => 'amhyb', 'Ah.04g164850' => 'amhyb', 'Ah.05g178060' => 'amhyb', 'Ah.07g204270' => 'amhyb', 'Ah.07g208480' => 'amhyb', 'Ah.09g237410' => 'amhyb', 'Ah.14g089460' => 'amhyb', 'AL1G41790' => 'aly', 'AL1G49050' => 'aly', 'AL1G53810' => 'aly', 'AL1G61400' => 'aly', 'AL4G18580' => 'aly', 'AL5G12510' => 'aly', 'AL5G12540' => 'aly', 'AL6G43230' => 'aly', 'AL7G10370' => 'aly', 'AL7G19250' => 'aly', 'AL8G12240' => 'aly', 'AL8G18540' => 'aly', 'Aqoxy1G02409' => 'aox', 'Aqoxy2G03993' => 'aox', 'Aqoxy3G03357' => 'aox', 'Aqoxy4G00785' => 'aox', 'Aqoxy5G02598' => 'aox', 'Aqoxy6G00132' => 'aox', 'Aqoxy7G01776' => 'aox', 'Aqoxy7G02316' => 'aox', 'Aqoxy7G03973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.12AFKW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B8730' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27IQR1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3F75VG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3RE0GA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41TCQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.527VTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FIR39' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5W8UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DA38EV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ63HS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H1I32C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HC27T5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4M8AP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7N3CZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9UVDZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LS1NQA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT1D4B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SKC4TM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCFV76' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF9Q1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQWD9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1ZM88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WE07RT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YCK7VH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJE6Q6' => 'arhy', 'AT1G28240' => 'ath', 'AT1G34550' => 'ath', 'AT1G53040' => 'ath', 'AT2G02910' => 'ath', 'AT4G09630' => 'ath', 'AT4G38500' => 'ath', 'AT5G42660' => 'ath', 'AT5G46220' => 'ath', 'ATR0152G026' => 'atr', 'ATR0564G343' => 'atr', 'ATR0706G151' => 'atr', 'ATR0733G207' => 'atr', 'ATR0751G234' => 'atr', 'ATR0807G048' => 'atr', 'ATR1091G084' => 'atr', 'Atru.chr10.1229' => 'acertr', 'Atru.chr10.1230' => 'acertr', 'Atru.chr10.1874' => 'acertr', 'Atru.chr11.1808' => 'acertr', 'Atru.chr13.1795' => 'acertr', 'Atru.chr13.570' => 'acertr', 'Atru.chr2.2608' => 'acertr', 'Atru.chr2.2609' => 'acertr', 'Atru.chr5.3428' => 'acertr', 'Atru.chr8.1171' => 'acertr', 'AUR62004651' => 'cqu', 'AUR62008675' => 'cqu', 'AUR62010014' => 'cqu', 'AUR62013004' => 'cqu', 'AUR62014825' => 'cqu', 'AUR62015015' => 'cqu', 'AUR62015151' => 'cqu', 'AUR62017020' => 'cqu', 'AUR62019422' => 'cqu', 'AUR62023570' => 'cqu', 'AUR62025571' => 'cqu', 'AUR62029098' => 'cqu', 'AUR62033863' => 'cqu', 'AUR62034296' => 'cqu', 'AUR62040075' => 'cqu', 'BcaB02g07334' => 'bca', 'BcaB02g10575' => 'bca', 'BcaB03g12119' => 'bca', 'BcaB03g12120' => 'bca', 'BcaB03g13945' => 'bca', 'BcaB04g17123' => 'bca', 'BcaB04g17867' => 'bca', 'BcaB04g19839' => 'bca', 'BcaB07g30317' => 'bca', 'BcaB07g32432' => 'bca', 'BcaB07g33362' => 'bca', 'BcaB08g36611' => 'bca', 'BcaC01g00028' => 'bca', 'BcaC01g01356' => 'bca', 'BcaC01g02034' => 'bca', 'BcaC01g06051' => 'bca', 'BcaC03g16839' => 'bca', 'BcaC03g17176' => 'bca', 'BcaC05g26829' => 'bca', 'BcaC06g31490' => 'bca', 'BcaC06g35344' => 'bca', 'BcaC06g36570' => 'bca', 'BcaC07g37537' => 'bca', 'BcaC08g43491' => 'bca', 'BcaC08g43773' => 'bca', 'BcaNung00234' => 'bca', 'BcaNung01982' => 'bca', 'BcaNung03707' => 'bca', 'BcaNung06454' => 'bca', 'BolC2t10762H' => 'bol', 'BolC2t11191H' => 'bol', 'BolC3t14322H' => 'bol', 'BolC3t19747H' => 'bol', 'BolC3t21425H' => 'bol', 'BolC4t27800H' => 'bol', 'BolC5t31423H' => 'bol', 'BolC6t35951H' => 'bol', 'BolC6t36282H' => 'bol', 'BolC7t40678H' => 'bol', 'BolC7t40679H' => 'bol', 'BolC7t42222H' => 'bol', 'BolC7t43492H' => 'bol', 'BolC7t46785H' => 'bol', 'BolC8t47853H' => 'bol', 'BolC9t56805H' => 'bol', 'BraA02t08000Z' => 'bra', 'BraA02t08341Z' => 'bra', 'BraA03t10936Z' => 'bra', 'BraA03t15657Z' => 'bra', 'BraA04t18100Z' => 'bra', 'BraA05t20523Z' => 'bra', 'BraA06t23353Z' => 'bra', 'BraA06t27473Z' => 'bra', 'BraA06t27769Z' => 'bra', 'BraA07t28928Z' => 'bra', 'BraA08t32236Z' => 'bra', 'BraA08t32841Z' => 'bra', 'BraA08t34524Z' => 'bra', 'BraA09t38742Z' => 'bra', 'BraA09t39295Z' => 'bra', 'C02p47180' => 'bna', 'C02p50990' => 'bna', 'C03p19360' => 'bna', 'C03p74950' => 'bna', 'C03p91000' => 'bna', 'C04p63260' => 'bna', 'C05p27050' => 'bna', 'C06p08750' => 'bna', 'C06p11490' => 'bna', 'C07p02820' => 'bna', 'C07p17180' => 'bna', 'C07p29440' => 'bna', 'C07p63730' => 'bna', 'C09p39260' => 'bna', 'CAN.G1164.34' => 'can', 'CAN.G1164.39' => 'can', 'CAN.G1530.3' => 'can', 'CAN.G162.61' => 'can', 'CAN.G176.6' => 'can', 'CAN.G289.49' => 'can', 'CAN.G370.21' => 'can', 'CAN.G370.22' => 'can', 'CAN.G371.117' => 'can', 'CAN.G58.37' => 'can', 'CAN.G588.98' => 'can', 'CANSAT21G2266' => 'cansat', 'CANSAT25G2799' => 'cansat', 'CANSAT35G0862' => 'cansat', 'CANSAT35G1704' => 'cansat', 'CANSAT35G1760' => 'cansat', 'CANSAT56G3971' => 'cansat', 'CANSAT56G4116' => 'cansat', 'CANSAT80G1259' => 'cansat', 'CARHR027730' => 'chi', 'CARHR033880' => 'chi', 'CARHR043270' => 'chi', 'CARHR145330' => 'chi', 'CARHR145340' => 'chi', 'CARHR175570' => 'chi', 'CARHR181570' => 'chi', 'CARHR258470' => 'chi', 'CARHR260490' => 'chi', 'CARHR294220' => 'chi', 'Carub.0001s2668' => 'cru', 'Carub.0001s3257' => 'cru', 'Carub.0001s4220' => 'cru', 'Carub.0005s0179' => 'cru', 'Carub.0006s2807' => 'cru', 'Carub.0007s0039' => 'cru', 'Carub.0008s0169' => 'cru', 'Carub.0008s0636' => 'cru', 'Ca_00338_v3' => 'car', 'Ca_00542_v3' => 'car', 'Ca_01844_v3' => 'car', 'Ca_10611_v3' => 'car', 'Ca_13326_v3' => 'car', 'Ca_17944_v3' => 'car', 'Ca_18546_v3' => 'car', 'Ca_24219_v3' => 'car', 'Ca_29972_v3' => 'car', 'CBR_g3681' => 'cbr', 'CBR_g40021' => 'cbr', 'Cc01_g08140' => 'ccan', 'Cc02_g13410' => 'ccan', 'Cc02_g37480' => 'ccan', 'Cc05_g12030' => 'ccan', 'Cc09_g03370' => 'ccan', 'Cc09_g10300' => 'ccan', 'Cc10_g03530' => 'ccan', 'Cc10_g11380' => 'ccan', 'CDE01G0176' => 'cde', 'CDE02G0675' => 'cde', 'CDE02G0942' => 'cde', 'CDE02G1153' => 'cde', 'CDE02G4177' => 'cde', 'CDE04G2117' => 'cde', 'CDE04G2736' => 'cde', 'CDE08G1161' => 'cde', 'CDE09G1238' => 'cde', 'Cfa000467' => 'cfa', 'Cfa000947' => 'cfa', 'Cfa004969' => 'cfa', 'Cfa005284' => 'cfa', 'Cfa008993' => 'cfa', 'Cfa018187' => 'cfa', 'Cfa018454' => 'cfa', 'Cfa020585' => 'cfa', 'Ciclev10000424m.g' => 'ccl', 'Ciclev10003605m.g' => 'ccl', 'Ciclev10007828m.g' => 'ccl', 'Ciclev10014620m.g' => 'ccl', 'Ciclev10015169m.g' => 'ccl', 'Ciclev10018291m.g' => 'ccl', 'Ciclev10028256m.g' => 'ccl', 'Ciclev10033822m.g' => 'ccl', 'CiPaw.05G060300' => 'cil', 'CiPaw.05G085000' => 'cil', 'CiPaw.06G083700' => 'cil', 'CiPaw.06G120300' => 'cil', 'CiPaw.09G060500' => 'cil', 'CiPaw.09G123800' => 'cil', 'CiPaw.11G169700' => 'cil', 'CiPaw.12G118300' => 'cil', 'CiPaw.15G071000' => 'cil', 'CiPaw.15G081900' => 'cil', 'ClCG01G024610' => 'cla', 'ClCG03G006070' => 'cla', 'ClCG05G019250' => 'cla', 'ClCG09G009500' => 'cla', 'ClCG11G008200' => 'cla', 'ClCG11G018080' => 'cla', 'COL.COLO4_17373' => 'col', 'COL.COLO4_22994' => 'col', 'COL.COLO4_26389' => 'col', 'COL.COLO4_27170' => 'col', 'COL.COLO4_31074' => 'col', 'COL.COLO4_31465' => 'col', 'COL.COLO4_36438' => 'col', 'COL.COLO4_36439' => 'col', 'Cpa.g.c38781' => 'cpa', 'Cpa.g.sc128.12' => 'cpa', 'Cpa.g.sc166.7' => 'cpa', 'Cpa.g.sc166.8' => 'cpa', 'Cpa.g.sc20.111' => 'cpa', 'Cpa.g.sc27.31' => 'cpa', 'Cpa.g.sc64.36' => 'cpa', 'Cpa.g.sc64.37' => 'cpa', 'Cpa.g.sc66.49' => 'cpa', 'Cpa.g.sc80.64' => 'cpa', 'CsaV3_1G012320' => 'csa', 'CsaV3_2G008480' => 'csa', 'CsaV3_2G033450' => 'csa', 'CsaV3_3G044830' => 'csa', 'CsaV3_4G033710' => 'csa', 'CsaV3_6G051730' => 'csa', 'CsaV3_7G025350' => 'csa', 'CSS0001067' => 'camsi', 'CSS0005996' => 'camsi', 'CSS0006590' => 'camsi', 'CSS0009673' => 'camsi', 'CSS0010201' => 'camsi', 'CSS0010549' => 'camsi', 'CSS0011364' => 'camsi', 'CSS0014473' => 'camsi', 'CSS0014961' => 'camsi', 'CSS0020191' => 'camsi', 'CSS0021165' => 'camsi', 'CSS0022306' => 'camsi', 'CSS0030591' => 'camsi', 'CSS0030696' => 'camsi', 'CSS0032653' => 'camsi', 'CSS0037487' => 'camsi', 'CSS0041102' => 'camsi', 'CSS0041261' => 'camsi', 'CSS0046246' => 'camsi', 'CSS0049256' => 'camsi', 'DCAR_004075' => 'dca', 'DCAR_011538' => 'dca', 'DCAR_019553' => 'dca', 'DCAR_020952' => 'dca', 'DCAR_021739' => 'dca', 'DCAR_027407' => 'dca', 'DCAR_027913' => 'dca', 'DCAR_028066' => 'dca', 'Dinv05899' => 'din', 'Dinv07563' => 'din', 'Dinv08010' => 'din', 'Dinv14125' => 'din', 'Dinv20172' => 'din', 'Dinv30743' => 'din', 'Dinv31229' => 'din', 'Dinv34162' => 'din', 'Dinv36028' => 'din', 'Dinv39368' => 'din', 'Dinv40565' => 'din', 'Dinv41706' => 'din', 'Duzib052G0089' => 'dzi', 'Duzib116G0641' => 'dzi', 'Duzib132G0069' => 'dzi', 'Duzib132G1219' => 'dzi', 'Duzib147G0278' => 'dzi', 'Duzib160G0480' => 'dzi', 'Duzib170G0661' => 'dzi', 'Duzib177G0591' => 'dzi', 'Duzib187G1353' => 'dzi', 'Duzib192G0858' => 'dzi', 'Duzib192G0883' => 'dzi', 'Duzib213G0506' => 'dzi', 'Duzib235G0289' => 'dzi', 'Duzib251G0422' => 'dzi', 'ECA232G3898' => 'eca', 'ECA233G5950' => 'eca', 'ECA234G1699' => 'eca', 'ECA234G2421' => 'eca', 'ECA236G0426' => 'eca', 'ECA236G4331' => 'eca', 'ECA248G2573' => 'eca', 'EL10Ac1g00077' => 'bvu', 'EL10Ac1g01746' => 'bvu', 'EL10Ac2g03464' => 'bvu', 'EL10Ac4g08176' => 'bvu', 'EL10Ac7g17521' => 'bvu', 'EL10Ac8g20386' => 'bvu', 'EL10Ac9g21343' => 'bvu', 'EL10Ac9g22688' => 'bvu', 'Eucgr.B03434' => 'egr', 'Eucgr.D00618' => 'egr', 'Eucgr.E02395' => 'egr', 'Eucgr.F01129' => 'egr', 'Eucgr.F02622' => 'egr', 'Eucgr.F04207' => 'egr', 'FAN01G0570' => 'fan', 'FAN03G3351' => 'fan', 'FAN06G3702' => 'fan', 'FAN07G2149' => 'fan', 'FAN10G3758' => 'fan', 'FAN11G1170' => 'fan', 'FAN11G2050' => 'fan', 'FAN11G2724' => 'fan', 'FAN12G1700' => 'fan', 'FAN12G2028' => 'fan', 'FAN15G1160' => 'fan', 'FAN15G3063' => 'fan', 'FAN16G2540' => 'fan', 'FAN16G3077' => 'fan', 'FAN16G3624' => 'fan', 'FAN17G0221' => 'fan', 'FAN20G2492' => 'fan', 'FAN20G2905' => 'fan', 'FAN21G0548' => 'fan', 'FAN21G1300' => 'fan', 'FAN22G0077' => 'fan', 'FAN22G1315' => 'fan', 'FAN24G1280' => 'fan', 'FAN24G1445' => 'fan', 'FAN24G3527' => 'fan', 'FAN25G0464' => 'fan', 'FAN25G2885' => 'fan', 'FAN25G3270' => 'fan', 'FAN27G1101' => 'fan', 'FAN27G2846' => 'fan', 'FAN27G3524' => 'fan', 'FvH4_2g11770' => 'fve', 'FvH4_2g15630' => 'fve', 'FvH4_3g05570' => 'fve', 'FvH4_3g09110' => 'fve', 'FvH4_3g19940' => 'fve', 'FvH4_4g04821' => 'fve', 'FvH4_4g31480' => 'fve', 'FvH4_7g01740' => 'fve', 'Glyma.05G130400' => 'gma', 'Glyma.05G156400' => 'gma', 'Glyma.07G197000' => 'gma', 'Glyma.08G085151' => 'gma', 'Glyma.08G114500' => 'gma', 'Glyma.08G300400' => 'gma', 'Glyma.10G215800' => 'gma', 'Glyma.12G224400' => 'gma', 'Glyma.13G179300' => 'gma', 'Glyma.13G218151' => 'gma', 'Glyma.13G238800' => 'gma', 'Glyma.13G276900' => 'gma', 'Glyma.14G078200' => 'gma', 'Glyma.15G074500' => 'gma', 'Glyma.15G094100' => 'gma', 'Glyma.17G247200' => 'gma', 'Glyma.18G120100' => 'gma', 'Glyma.20G176000' => 'gma', 'Gohir.A01G063600' => 'ghi', 'Gohir.A01G170301' => 'ghi', 'Gohir.A02G060500' => 'ghi', 'Gohir.A05G133850' => 'ghi', 'Gohir.A05G161400' => 'ghi', 'Gohir.A06G012900' => 'ghi', 'Gohir.A06G035901' => 'ghi', 'Gohir.A06G127100' => 'ghi', 'Gohir.A06G210500' => 'ghi', 'Gohir.A08G008650' => 'ghi', 'Gohir.A09G072700' => 'ghi', 'Gohir.A09G088301' => 'ghi', 'Gohir.A10G040600' => 'ghi', 'Gohir.A12G036300' => 'ghi', 'Gohir.A12G143350' => 'ghi', 'Gohir.A12G165500' => 'ghi', 'Gohir.A13G145700' => 'ghi', 'Gohir.D01G050000' => 'ghi', 'Gohir.D01G051366' => 'ghi', 'Gohir.D01G161350' => 'ghi', 'Gohir.D02G065900' => 'ghi', 'Gohir.D05G164200' => 'ghi', 'Gohir.D05G355500' => 'ghi', 'Gohir.D06G010400' => 'ghi', 'Gohir.D06G111250' => 'ghi', 'Gohir.D06G132000' => 'ghi', 'Gohir.D06G210500' => 'ghi', 'Gohir.D07G165675' => 'ghi', 'Gohir.D08G062240' => 'ghi', 'Gohir.D08G086101' => 'ghi', 'Gohir.D08G138060' => 'ghi', 'Gohir.D09G072300' => 'ghi', 'Gohir.D10G041400' => 'ghi', 'Gohir.D11G191020' => 'ghi', 'Gohir.D11G212066' => 'ghi', 'Gohir.D12G036300' => 'ghi', 'Gohir.D12G168600' => 'ghi', 'Gohir.D13G150600' => 'ghi', 'Gorai.001G057300' => 'gra', 'Gorai.002G069900' => 'gra', 'Gorai.002G200000' => 'gra', 'Gorai.003G067600' => 'gra', 'Gorai.005G074800' => 'gra', 'Gorai.006G087300' => 'gra', 'Gorai.008G037500' => 'gra', 'Gorai.008G181400' => 'gra', 'Gorai.009G169400' => 'gra', 'Gorai.009G387900' => 'gra', 'Gorai.010G013300' => 'gra', 'Gorai.010G153800' => 'gra', 'Gorai.010G255800' => 'gra', 'Gorai.011G043700' => 'gra', 'Gorai.011G198900' => 'gra', 'Gorai.013G168400' => 'gra', 'GSVIVG01005212001' => 'vvi', 'GSVIVG01006163001' => 'vvi', 'GSVIVG01009625001' => 'vvi', 'GSVIVG01014338001' => 'vvi', 'GSVIVG01020005001' => 'vvi', 'GSVIVG01021450001' => 'vvi', 'GSVIVG01023975001' => 'vvi', 'GSVIVG01034490001' => 'vvi', 'HanXRQChr04g0112071' => 'han', 'HanXRQChr05g0131151' => 'han', 'HanXRQChr09g0262371' => 'han', 'HanXRQChr09g0268401' => 'han', 'HanXRQChr10g0279241' => 'han', 'HanXRQChr10g0297961' => 'han', 'HanXRQChr11g0326231' => 'han', 'HanXRQChr11g0328471' => 'han', 'HanXRQChr16g0507941' => 'han', 'HanXRQChr17g0560211' => 'han', 'Haze_02108' => 'cav', 'Haze_02428' => 'cav', 'Haze_05593' => 'cav', 'Haze_06448' => 'cav', 'Haze_09427' => 'cav', 'Haze_12022' => 'cav', 'Haze_17612' => 'cav', 'Haze_17928' => 'cav', 'Hma1.2p1_0032F.1_g019250' => 'hma', 'Hma1.2p1_0163F.1_g072690' => 'hma', 'Hma1.2p1_0265F.1_g106710' => 'hma', 'Hma1.2p1_0286F.1_g113970' => 'hma', 'Hma1.2p1_0363F.1_g136640' => 'hma', 'Hma1.2p1_0584F.1_g183470' => 'hma', 'Hma1.2p1_0885F.1_g232570' => 'hma', 'HPP92_006022' => 'vpl', 'HPP92_007320' => 'vpl', 'HPP92_011521' => 'vpl', 'HPP92_019387' => 'vpl', 'HPP92_024038' => 'vpl', 'Hund05891' => 'sun', 'Hund06450' => 'sun', 'Hund12053' => 'sun', 'Hund16800' => 'sun', 'Hund21222' => 'sun', 'Hund22896' => 'sun', 'Hund23746' => 'sun', 'Hund27083' => 'sun', 'Lalb_Chr02g0141831' => 'lal', 'Lalb_Chr02g0141841' => 'lal', 'Lalb_Chr05g0220411' => 'lal', 'Lalb_Chr06g0162081' => 'lal', 'Lalb_Chr09g0327651' => 'lal', 'Lalb_Chr13g0295051' => 'lal', 'Lalb_Chr15g0086801' => 'lal', 'Lalb_Chr16g0383781' => 'lal', 'Lalb_Chr16g0383791' => 'lal', 'Lalb_Chr18g0055441' => 'lal', 'Lalb_Chr18g0059611' => 'lal', 'Lalb_Chr20g0109661' => 'lal', 'Lalb_Chr20g0109831' => 'lal', 'Lalb_Chr20g0121871' => 'lal', 'Lalb_Chr22g0355361' => 'lal', 'Lalb_Chr25g0286371' => 'lal', 'Lj1A1187G43' => 'lonja', 'Lj1A1205T50' => 'lonja', 'Lj1A800G33' => 'lonja', 'Lj1C1187T7' => 'lonja', 'Lj1C843T11' => 'lonja', 'Lj1g0010940' => 'lja', 'Lj2A288T69' => 'lonja', 'Lj3g0024276' => 'lja', 'Lj4A47T76' => 'lonja', 'Lj4g0005805' => 'lja', 'Lj4g0006097' => 'lja', 'Lj4g0008528' => 'lja', 'Lj4g0024907' => 'lja', 'Lj5g0012472' => 'lja', 'Lj5g0018648' => 'lja', 'Lj6C789G1' => 'lonja', 'Lj6g0004000' => 'lja', 'Lj7A292G67' => 'lonja', 'Lj7A292T64' => 'lonja', 'Lj9A400T58' => 'lonja', 'Lsat_1_v5_gn_1_126181' => 'lsa', 'Lsat_1_v5_gn_4_123041' => 'lsa', 'Lsat_1_v5_gn_4_133620' => 'lsa', 'Lsat_1_v5_gn_4_53221' => 'lsa', 'Lsat_1_v5_gn_4_71961' => 'lsa', 'Lsat_1_v5_gn_7_105241' => 'lsa', 'Lsat_1_v5_gn_7_21361' => 'lsa', 'Lsat_1_v5_gn_7_28860' => 'lsa', 'Lsat_1_v5_gn_7_31260' => 'lsa', 'Lsat_1_v5_gn_8_52801' => 'lsa', 'Manes.02G191400' => 'mes', 'Manes.03G110100' => 'mes', 'Manes.04G071100' => 'mes', 'Manes.05G100500' => 'mes', 'Manes.05G164700' => 'mes', 'Manes.15G087000' => 'mes', 'Manes.15G121500' => 'mes', 'Manes.16G028300' => 'mes', 'Manes.17G046100' => 'mes', 'Manes.17G069800' => 'mes', 'Manes.18G100500' => 'mes', 'Mapoly0002s0109' => 'mpo', 'Mapoly0024s0007' => 'mpo', 'Mapoly0089s0032' => 'mpo', 'MBI04_g42241_MAGBIO' => 'mbi', 'MBI05_g11988_MAGBIO' => 'mbi', 'MBI05_g35452_MAGBIO' => 'mbi', 'MBI07_g30179_MAGBIO' => 'mbi', 'MBI07_g35859_MAGBIO' => 'mbi', 'MBI07_g35860_MAGBIO' => 'mbi', 'MBI07_g37166_MAGBIO' => 'mbi', 'MBI08_g18172_MAGBIO' => 'mbi', 'MBI09_g08441_MAGBIO' => 'mbi', 'MBI13_g01676_MAGBIO' => 'mbi', 'MBI14_g42955_MAGBIO' => 'mbi', 'MBI16_g13161_MAGBIO' => 'mbi', 'MBI17_g27204_MAGBIO' => 'mbi', 'MBI19_g21595_MAGBIO' => 'mbi', 'MD00G1148400' => 'mdo', 'MD02G1301200' => 'mdo', 'MD03G1227800' => 'mdo', 'MD05G1041100' => 'mdo', 'MD05G1124800' => 'mdo', 'MD05G1284000' => 'mdo', 'MD05G1338800' => 'mdo', 'MD05G1338900' => 'mdo', 'MD07G1022800' => 'mdo', 'MD10G1047500' => 'mdo', 'MD10G1127500' => 'mdo', 'MD10G1262300' => 'mdo', 'MD10G1293800' => 'mdo', 'MD16G1074300' => 'mdo', 'Medtr1g021670' => 'mtr', 'Medtr1g096320' => 'mtr', 'Medtr2g013690' => 'mtr', 'Medtr2g019450' => 'mtr', 'Medtr2g085170' => 'mtr', 'Medtr4g088785' => 'mtr', 'Medtr8g055930' => 'mtr', 'Medtr8g085850' => 'mtr', 'MELO3C002605.2' => 'cme', 'MELO3C003891.2' => 'cme', 'MELO3C004012.2' => 'cme', 'MELO3C007134.2' => 'cme', 'MELO3C008118.2' => 'cme', 'MELO3C016700.2' => 'cme', 'MELO3C024127.2' => 'cme', 'MELO3C033361.2' => 'cme', 'MELO3C033362.2' => 'cme', 'Migut.C00430' => 'egut', 'Migut.C01246' => 'egut', 'Migut.E00101' => 'egut', 'Migut.H01486' => 'egut', 'Migut.H01939' => 'egut', 'Migut.K00360' => 'egut', 'Migut.M00910' => 'egut', 'Migut.M01139' => 'egut', 'Migut.N02677' => 'egut', 'MSTRG.13252' => 'ama', 'MSTRG.14701' => 'ama', 'MSTRG.1521' => 'ama', 'MSTRG.15884' => 'ama', 'MSTRG.16242' => 'ama', 'MSTRG.22285' => 'ama', 'MSTRG.22444' => 'ama', 'MSTRG.2349' => 'ama', 'MSTRG.26308' => 'ama', 'MSTRG.28296' => 'ama', 'MSTRG.9895' => 'ama', 'Nitab4.5_0000110g0060' => 'nta', 'Nitab4.5_0000420g0130' => 'nta', 'Nitab4.5_0000422g0030' => 'nta', 'Nitab4.5_0000560g0180' => 'nta', 'Nitab4.5_0000703g0100' => 'nta', 'Nitab4.5_0000786g0200' => 'nta', 'Nitab4.5_0001336g0020' => 'nta', 'Nitab4.5_0001796g0030' => 'nta', 'Nitab4.5_0003348g0060' => 'nta', 'Nitab4.5_0003698g0040' => 'nta', 'Nitab4.5_0003942g0090' => 'nta', 'Nitab4.5_0004775g0070' => 'nta', 'Nitab4.5_0004864g0030' => 'nta', 'Nitab4.5_0005615g0020' => 'nta', 'Nitab4.5_0009288g0030' => 'nta', 'Nitab4.5_0009341g0010' => 'nta', 'Nitab4.5_0009535g0010' => 'nta', 'Nn1g03995' => 'nnu', 'Nn1g04100' => 'nnu', 'Nn1g06530' => 'nnu', 'Nn3g16404' => 'nnu', 'Nn3g17212' => 'nnu', 'Nn3g20776' => 'nnu', 'Nn3g21923' => 'nnu', 'Nn5g27737' => 'nnu', 'Nn5g29461' => 'nnu', 'Nn7g38355' => 'nnu', 'Nn8g39873' => 'nnu', 'Oeu000548.2' => 'oeu', 'Oeu004672.1' => 'oeu', 'Oeu015605.2' => 'oeu', 'Oeu016092.1' => 'oeu', 'Oeu017879.3' => 'oeu', 'Oeu024910.1' => 'oeu', 'Oeu028965.1' => 'oeu', 'Oeu031269.1' => 'oeu', 'Oeu031270.1' => 'oeu', 'Oeu032535.1' => 'oeu', 'Oeu034151.1' => 'oeu', 'Oeu034152.1' => 'oeu', 'Oeu034588.2' => 'oeu', 'Oeu050846.1' => 'oeu', 'Oeu050849.2' => 'oeu', 'Oeu051063.2' => 'oeu', 'Oeu052368.1' => 'oeu', 'Oeu052370.1' => 'oeu', 'Os01g0210400' => 'osa', 'Os01g0304300' => 'osa', 'Os01g0749100' => 'osa', 'Os02g0745800' => 'osa', 'Os03g0769050' => 'osa', 'Os05g0531500' => 'osa', 'Os06g0724300' => 'osa', 'Os11g0198100' => 'osa', 'Peaxi162Scf00069g01425' => 'pax', 'Peaxi162Scf00280g00811' => 'pax', 'Peaxi162Scf00310g00615' => 'pax', 'Peaxi162Scf00362g00542' => 'pax', 'Peaxi162Scf00461g00310' => 'pax', 'Peaxi162Scf00530g00118' => 'pax', 'Peaxi162Scf00541g00057' => 'pax', 'Peaxi162Scf00661g00017' => 'pax', 'Peaxi162Scf00926g00027' => 'pax', 'Peaxi162Scf01064g00263' => 'pax', 'Peaxi162Scf01211g00135' => 'pax', 'PGR004G2336' => 'pgr', 'PGR042G0327' => 'pgr', 'PGR042G1957' => 'pgr', 'PGR042G2003' => 'pgr', 'PGR042G3929' => 'pgr', 'PGR083G1137' => 'pgr', 'PGR083G1364' => 'pgr', 'PGSC0003DMG400003381' => 'stu', 'PGSC0003DMG400003417' => 'stu', 'PGSC0003DMG400008981' => 'stu', 'PGSC0003DMG400012417' => 'stu', 'PGSC0003DMG400012823' => 'stu', 'PGSC0003DMG400016885' => 'stu', 'PGSC0003DMG400022812' => 'stu', 'PGSC0003DMG400029726' => 'stu', 'PGSC0003DMG401009243' => 'stu', 'PGSC0003DMG401031505' => 'stu', 'PGSC0003DMG402031505' => 'stu', 'Phvul.001G017600' => 'pvu', 'Phvul.002G193500' => 'pvu', 'Phvul.002G228900' => 'pvu', 'Phvul.002G236800' => 'pvu', 'Phvul.003G049500' => 'pvu', 'Phvul.005G072000' => 'pvu', 'Phvul.006G164800' => 'pvu', 'Phvul.006G185100' => 'pvu', 'Phvul.007G090000' => 'pvu', 'Potri.001G399800' => 'ptr', 'Potri.002G149900' => 'ptr', 'Potri.004G044100' => 'ptr', 'Potri.004G177600' => 'ptr', 'Potri.009G138000' => 'ptr', 'Potri.010G094000' => 'ptr', 'Potri.011G053000' => 'ptr', 'Potri.011G119300' => 'ptr', 'Potri.013G113700' => 'ptr', 'Potri.018G107800' => 'ptr', 'Potri.019G084100' => 'ptr', 'Pp3c14_23720' => 'ppa', 'Pp3c16_6340' => 'ppa', 'Pp3c23_13420' => 'ppa', 'Pp3c24_2740' => 'ppa', 'Pp3c25_860' => 'ppa', 'Pp3c8_21750' => 'ppa', 'Prupe.1G273000' => 'ppe', 'Prupe.1G273700' => 'ppe', 'Prupe.1G274100' => 'ppe', 'Prupe.2G023300' => 'ppe', 'Prupe.4G048000' => 'ppe', 'Prupe.4G080400' => 'ppe', 'Prupe.4G181200' => 'ppe', 'Prupe.8G056900' => 'ppe', 'Prupe.8G168700' => 'ppe', 'Psat1g189080' => 'psa', 'Psat1g204760' => 'psa', 'Psat4g175560' => 'psa', 'Psat4g177720' => 'psa', 'Psat5g244240' => 'psa', 'Psat6g010720' => 'psa', 'Psat6g187200' => 'psa', 'Psat7g072040' => 'psa', 'PSO017G3501' => 'pso', 'PSO063G2148' => 'pso', 'PSO063G5608' => 'pso', 'PSO210G6392' => 'pso', 'PSO541G2319' => 'pso', 'PSO541G2836' => 'pso', 'PSO541G4012' => 'pso', 'PSO541G6253' => 'pso', 'PSO675G0580' => 'pso', 'PSO675G0856' => 'pso', 'PSO675G5635' => 'pso', 'PSO675G9157' => 'pso', 'PSO832G1660' => 'pso', 'PSO832G1969' => 'pso', 'QL02p007186' => 'qlo', 'QL02p033904' => 'qlo', 'QL03p064391' => 'qlo', 'QL05p040593' => 'qlo', 'QL05p058242' => 'qlo', 'QL08p021825' => 'qlo', 'QL11p004981' => 'qlo', 'RcHm_v2.0_Chr1g0318301' => 'rch', 'RcHm_v2.0_Chr4g0418501' => 'rch', 'RcHm_v2.0_Chr4g0439971' => 'rch', 'RcHm_v2.0_Chr5g0008541' => 'rch', 'RcHm_v2.0_Chr5g0014101' => 'rch', 'RcHm_v2.0_Chr5g0014131' => 'rch', 'RcHm_v2.0_Chr5g0033621' => 'rch', 'RcHm_v2.0_Chr6g0272041' => 'rch', 'RcHm_v2.0_Chr6g0278831' => 'rch', 'Rhsim02G0130400' => 'rsi', 'Rhsim02G0171100' => 'rsi', 'Rhsim05G0053000' => 'rsi', 'Rhsim05G0053100' => 'rsi', 'Rhsim06G0096500' => 'rsi', 'Rhsim06G0096600' => 'rsi', 'Rhsim06G0199100' => 'rsi', 'Rhsim12G0062300' => 'rsi', 'Rhsim12G0062800' => 'rsi', 'Sabra02G0118600' => 'sbr', 'Sabra04G0027300' => 'sbr', 'Sabra04G0119500' => 'sbr', 'Sabra08G0112500' => 'sbr', 'Sabra11G0036800' => 'sbr', 'Sabra11G0103800' => 'sbr', 'Sabra13G0096300' => 'sbr', 'Sabra16G0262300' => 'sbr', 'Sabra18G0091700' => 'sbr', 'Sabra19G0095400' => 'sbr', 'SalBow6G3080' => 'sbo', 'SalBow7G1157' => 'sbo', 'SalBow7G2123' => 'sbo', 'SalBow7G2285' => 'sbo', 'SalBow7G3537' => 'sbo', 'SalBow8G2947' => 'sbo', 'SalBow8G4463' => 'sbo', 'SalBow8G5466' => 'sbo', 'Sc01g0001750' => 'sci', 'Sc02g0006640' => 'sci', 'Sc02g0006670' => 'sci', 'Sc04g0008220' => 'sci', 'Sc05g0006190' => 'sci', 'Sc08g0002760' => 'sci', 'Sc17g0006170' => 'sci', 'Sc22g0002050' => 'sci', 'Sc23g0001190' => 'sci', 'Sc24g0000980' => 'sci', 'Sed0006245' => 'sed', 'Sed0007543' => 'sed', 'Sed0009411' => 'sed', 'Sed0010765' => 'sed', 'Sed0012944' => 'sed', 'Sed0014682' => 'sed', 'Sed0016174' => 'sed', 'Sed0016796' => 'sed', 'Sed0020317' => 'sed', 'Sed0021467' => 'sed', 'SEGI_01316' => 'sgi', 'SEGI_03374' => 'sgi', 'SEGI_16265' => 'sgi', 'SEGI_18569' => 'sgi', 'SEGI_20351' => 'sgi', 'SEGI_26395' => 'sgi', 'SEGI_29469' => 'sgi', 'SEGI_34771' => 'sgi', 'SEGI_36769' => 'sgi', 'SEGI_37139' => 'sgi', 'SGA_v2.0_scaffold100G29687' => 'sas', 'SGA_v2.0_scaffold118G32472' => 'sas', 'SGA_v2.0_scaffold14G07051' => 'sas', 'SGA_v2.0_scaffold183G39845' => 'sas', 'SGA_v2.0_scaffold1G00174' => 'sas', 'SGA_v2.0_scaffold22G09714' => 'sas', 'SGA_v2.0_scaffold333G48992' => 'sas', 'SGA_v2.0_scaffold46G17491' => 'sas', 'SGA_v2.0_scaffold49G18294' => 'sas', 'SGA_v2.0_scaffold63G21658' => 'sas', 'SHI01741' => 'shi', 'SHI05771' => 'shi', 'SHI18077' => 'shi', 'SHI20525' => 'shi', 'SHI20527' => 'shi', 'SHI20528' => 'shi', 'SMO172G0185' => 'smo', 'SMO198G0020' => 'smo', 'SMO351G0006' => 'smo', 'SMO356G0118' => 'smo', 'SMO358G0296' => 'smo', 'SMO367G0079' => 'smo', 'SMO367G1277' => 'smo', 'Solyc01g014220.3' => 'sly', 'Solyc01g111770.2' => 'sly', 'Solyc02g078180.3' => 'sly', 'Solyc03g006430.3' => 'sly', 'Solyc03g006456.1' => 'sly', 'Solyc03g079860.2' => 'sly', 'Solyc04g079770.3' => 'sly', 'Solyc05g007430.4' => 'sly', 'Solyc07g063150.3' => 'sly', 'Solyc08g016620.3' => 'sly', 'Solyc09g057590.3' => 'sly', 'Solyc09g057600.1' => 'sly', 'Solyc10g009050.3' => 'sly', 'Solyc11g017420.2' => 'sly', 'Sopen01g053810' => 'spe', 'Sopen02g023040' => 'spe', 'Sopen03g002440' => 'spe', 'Sopen04g033350' => 'spe', 'Sopen05g003310' => 'spe', 'Sopen07g004050' => 'spe', 'Sopen07g031340' => 'spe', 'Sopen08g006990' => 'spe', 'Sopen10g004830' => 'spe', 'Sopen11g009370' => 'spe', 'Sp1g24450' => 'spa', 'Sp1g29670' => 'spa', 'Sp1g39600' => 'spa', 'Sp2g11080' => 'spa', 'Sp2g13970' => 'spa', 'Sp4g16130' => 'spa', 'Sp6g13080' => 'spa', 'Sp7g37270' => 'spa', 'TAR371G0065' => 'tar', 'TAR376G0340' => 'tar', 'TAR376G0435' => 'tar', 'TAR381G0002' => 'tar', 'TAR381G1236' => 'tar', 'TAR624G0055' => 'tar', 'TAR624G0324' => 'tar', 'TAR624G0696' => 'tar', 'TAR624G0906' => 'tar', 'TAR625G0107' => 'tar', 'TAR626G0015' => 'tar', 'TAR626G1356' => 'tar', 'TAR627G0888' => 'tar', 'TAR628G0399' => 'tar', 'TAR628G1327' => 'tar', 'TAR629G2831' => 'tar', 'TAR629G2874' => 'tar', 'TAR633G1432' => 'tar', 'TAR633G2771' => 'tar', 'THA.LOC104803394' => 'tha', 'THA.LOC104805153' => 'tha', 'THA.LOC104806784' => 'tha', 'THA.LOC104810473' => 'tha', 'THA.LOC104813100' => 'tha', 'THA.LOC104814215' => 'tha', 'THA.LOC104815554' => 'tha', 'THA.LOC104820544' => 'tha', 'THA.LOC104824754' => 'tha', 'THA.LOC104827717' => 'tha', 'Thecc.02G031400' => 'tca', 'Thecc.02G055900' => 'tca', 'Thecc.02G350800' => 'tca', 'Thecc.06G150900' => 'tca', 'Thecc.06G186600' => 'tca', 'Thecc.07G089600' => 'tca', 'Thecc.08G020400' => 'tca', 'Thecc.08G182100' => 'tca', 'Thhalv10000873m.g' => 'esa', 'Thhalv10004185m.g' => 'esa', 'Thhalv10006981m.g' => 'esa', 'Thhalv10007204m.g' => 'esa', 'Thhalv10011374m.g' => 'esa', 'Thhalv10013482m.g' => 'esa', 'Thhalv10017801m.g' => 'esa', 'Thhalv10024983m.g' => 'esa', 'TPR.G12072' => 'tpr', 'TPR.G15769' => 'tpr', 'TPR.G16504' => 'tpr', 'TPR.G16506' => 'tpr', 'TPR.G24345' => 'tpr', 'TPR.G26666' => 'tpr', 'TPR.G27320' => 'tpr', 'TPR.G31819' => 'tpr', 'TPR.G38879' => 'tpr', 'TPR.G39015' => 'tpr', 'TPR.G8819' => 'tpr', 'TWI09G0924' => 'twi', 'TWI12G0811' => 'twi', 'TWI12G1294' => 'twi', 'TWI31G0150' => 'twi', 'TWI36G1262' => 'twi', 'TWI38G1287' => 'twi', 'TWI38G1633' => 'twi', 'TWI38G1982' => 'twi', 'TWI39G0116' => 'twi', 'TWI60G1011' => 'twi', 'TWI63G0171' => 'twi', 'TWI73G0839' => 'twi', 'TWI79G1511' => 'twi', 'unitig_0.g915' => 'ugi', 'unitig_0.g916' => 'ugi', 'unitig_21.g20219' => 'ugi', 'unitig_21.g20416' => 'ugi', 'unitig_578.g16132' => 'ugi', 'unitig_578.g16718' => 'ugi', 'unitig_62.g23481' => 'ugi', 'unitig_744.g24535' => 'ugi', 'unitig_749.g13525' => 'ugi', 'vmacro01248' => 'vma', 'vmacro02290' => 'vma', 'vmacro10946' => 'vma', 'vmacro11865' => 'vma', 'vmacro12493' => 'vma', 'vmacro17322' => 'vma', 'vmacro21599' => 'vma', 'vmacro23041' => 'vma', 'VMungo0251G0004' => 'vmu', 'VMungo0251G2639' => 'vmu', 'VMungo0251G2967' => 'vmu', 'VMungo0540G0864' => 'vmu', 'VMungo0540G1569' => 'vmu', 'VMungo0647G0317' => 'vmu', 'VMungo0720G1373' => 'vmu', 'VMungo0720G1508' => 'vmu', 'VMungo1080G0485' => 'vmu', 'VMungo1215G3177' => 'vmu', 'Zm00001eb112600' => 'zma', 'Zm00001eb120220' => 'zma', 'Zm00001eb153240' => 'zma', 'Zm00001eb168880' => 'zma', 'Zm00001eb213920' => 'zma', 'Zm00001eb228280' => 'zma', 'Zm00001eb254580' => 'zma', 'Zm00001eb272180' => 'zma', 'Zm00001eb293190' => 'zma', 'Zm00001eb322930' => 'zma', 'Zm00001eb353360' => 'zma', 'Zm00001eb353390' => 'zma', 'Zm00001eb353430' => 'zma', 'Zm00001eb353440' => 'zma', 'Zm00001eb353780' => 'zma' ) $gf_id = 'HOM05D000499' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000499' ) $data_identifier = 'HOM05D000499' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 29, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 12, 'amhyb' => (int) 8, 'aly' => (int) 12, 'aox' => (int) 9, 'arhy' => (int) 26, 'ath' => (int) 8, 'atr' => (int) 7, 'acertr' => (int) 10, 'cqu' => (int) 15, 'bca' => (int) 29, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 11, 'cansat' => (int) 8, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 9, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 8, 'cpa' => (int) 10, 'csa' => (int) 7, 'camsi' => (int) 20, 'dca' => (int) 8, 'din' => (int) 12, 'dzi' => (int) 14, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 6, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 38, 'gra' => (int) 16, 'vvi' => (int) 8, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 5, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 11, 'lja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 11, 'mpo' => (int) 3, 'mbi' => (int) 14, 'mdo' => (int) 14, 'mtr' => (int) 8, 'cme' => (int) 9, 'egut' => (int) 9, 'ama' => (int) 11, 'nta' => (int) 17, 'nnu' => (int) 11, 'oeu' => (int) 18, 'osa' => (int) 8, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 6, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 9, 'rsi' => (int) 9, 'sbr' => (int) 10, 'sbo' => (int) 8, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 10, 'sas' => (int) 10, 'shi' => (int) 6, 'smo' => (int) 7, 'sly' => (int) 14, 'spe' => (int) 10, 'spa' => (int) 8, 'tar' => (int) 19, 'tha' => (int) 10, 'tca' => (int) 8, 'esa' => (int) 8, 'tpr' => (int) 11, 'twi' => (int) 13, 'ugi' => (int) 9, 'vma' => (int) 8, 'vmu' => (int) 10, 'zma' => (int) 15 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb353780' $species_info = array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ) $local_species = 'gma' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000499', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1066', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p29780' => 'bna', 'A02p33180' => 'bna', 'A03p16470' => 'bna', 'A03p66010' => 'bna', 'A04p25970' => 'bna', 'A06p01270' => 'bna', 'A06p46080' => 'bna', 'A07p11400' => 'bna', 'A08p01840' => 'bna', 'A08p08230' => 'bna', 'A08p25740' => 'bna', 'A09p32070' => 'bna', 'A09p37830' => 'bna', 'A09p42840' => 'bna', 'A09p42850' => 'bna', 'Aa31LG10G2060' => 'aar', 'Aa31LG2G7410' => 'aar', 'Aa31LG6G10200' => 'aar', 'Aa31LG6G16680' => 'aar', 'Aa31LG6G8470' => 'aar', 'Aa31LG9G12730' => 'aar', 'Aa31LG9G13680' => 'aar', 'Aa31LG9G14920' => 'aar', 'Aa31LG9G6650' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4977' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5467' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3254' => 'aag', 'Actinidia02578' => 'ach', 'Actinidia07693' => 'ach', 'Actinidia08413' => 'ach', 'Actinidia08414' => 'ach', 'Actinidia15289' => 'ach', 'Actinidia19871' => 'ach', 'Actinidia21475' => 'ach', 'Actinidia22576' => 'ach', 'Actinidia28327' => 'ach', 'Actinidia32491' => 'ach', 'Actinidia39463' => 'ach', 'Actinidia39571' => 'ach', 'Ah.01g013750' => 'amhyb', 'Ah.01g023210' => 'amhyb', 'Ah.04g164850' => 'amhyb', 'Ah.05g178060' => 'amhyb', 'Ah.07g204270' => 'amhyb', 'Ah.07g208480' => 'amhyb', 'Ah.09g237410' => 'amhyb', 'Ah.14g089460' => 'amhyb', 'AL1G41790' => 'aly', 'AL1G49050' => 'aly', 'AL1G53810' => 'aly', 'AL1G61400' => 'aly', 'AL4G18580' => 'aly', 'AL5G12510' => 'aly', 'AL5G12540' => 'aly', 'AL6G43230' => 'aly', 'AL7G10370' => 'aly', 'AL7G19250' => 'aly', 'AL8G12240' => 'aly', 'AL8G18540' => 'aly', 'Aqoxy1G02409' => 'aox', 'Aqoxy2G03993' => 'aox', 'Aqoxy3G03357' => 'aox', 'Aqoxy4G00785' => 'aox', 'Aqoxy5G02598' => 'aox', 'Aqoxy6G00132' => 'aox', 'Aqoxy7G01776' => 'aox', 'Aqoxy7G02316' => 'aox', 'Aqoxy7G03973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.12AFKW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B8730' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27IQR1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3F75VG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3RE0GA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41TCQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.527VTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FIR39' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5W8UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DA38EV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ63HS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H1I32C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HC27T5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4M8AP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7N3CZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9UVDZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LS1NQA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT1D4B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SKC4TM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCFV76' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF9Q1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQWD9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1ZM88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WE07RT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YCK7VH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJE6Q6' => 'arhy', 'AT1G28240' => 'ath', 'AT1G34550' => 'ath', 'AT1G53040' => 'ath', 'AT2G02910' => 'ath', 'AT4G09630' => 'ath', 'AT4G38500' => 'ath', 'AT5G42660' => 'ath', 'AT5G46220' => 'ath', 'ATR0152G026' => 'atr', 'ATR0564G343' => 'atr', 'ATR0706G151' => 'atr', 'ATR0733G207' => 'atr', 'ATR0751G234' => 'atr', 'ATR0807G048' => 'atr', 'ATR1091G084' => 'atr', 'Atru.chr10.1229' => 'acertr', 'Atru.chr10.1230' => 'acertr', 'Atru.chr10.1874' => 'acertr', 'Atru.chr11.1808' => 'acertr', 'Atru.chr13.1795' => 'acertr', 'Atru.chr13.570' => 'acertr', 'Atru.chr2.2608' => 'acertr', 'Atru.chr2.2609' => 'acertr', 'Atru.chr5.3428' => 'acertr', 'Atru.chr8.1171' => 'acertr', 'AUR62004651' => 'cqu', 'AUR62008675' => 'cqu', 'AUR62010014' => 'cqu', 'AUR62013004' => 'cqu', 'AUR62014825' => 'cqu', 'AUR62015015' => 'cqu', 'AUR62015151' => 'cqu', 'AUR62017020' => 'cqu', 'AUR62019422' => 'cqu', 'AUR62023570' => 'cqu', 'AUR62025571' => 'cqu', 'AUR62029098' => 'cqu', 'AUR62033863' => 'cqu', 'AUR62034296' => 'cqu', 'AUR62040075' => 'cqu', 'BcaB02g07334' => 'bca', 'BcaB02g10575' => 'bca', 'BcaB03g12119' => 'bca', 'BcaB03g12120' => 'bca', 'BcaB03g13945' => 'bca', 'BcaB04g17123' => 'bca', 'BcaB04g17867' => 'bca', 'BcaB04g19839' => 'bca', 'BcaB07g30317' => 'bca', 'BcaB07g32432' => 'bca', 'BcaB07g33362' => 'bca', 'BcaB08g36611' => 'bca', 'BcaC01g00028' => 'bca', 'BcaC01g01356' => 'bca', 'BcaC01g02034' => 'bca', 'BcaC01g06051' => 'bca', 'BcaC03g16839' => 'bca', 'BcaC03g17176' => 'bca', 'BcaC05g26829' => 'bca', 'BcaC06g31490' => 'bca', 'BcaC06g35344' => 'bca', 'BcaC06g36570' => 'bca', 'BcaC07g37537' => 'bca', 'BcaC08g43491' => 'bca', 'BcaC08g43773' => 'bca', 'BcaNung00234' => 'bca', 'BcaNung01982' => 'bca', 'BcaNung03707' => 'bca', 'BcaNung06454' => 'bca', 'BolC2t10762H' => 'bol', 'BolC2t11191H' => 'bol', 'BolC3t14322H' => 'bol', 'BolC3t19747H' => 'bol', 'BolC3t21425H' => 'bol', 'BolC4t27800H' => 'bol', 'BolC5t31423H' => 'bol', 'BolC6t35951H' => 'bol', 'BolC6t36282H' => 'bol', 'BolC7t40678H' => 'bol', 'BolC7t40679H' => 'bol', 'BolC7t42222H' => 'bol', 'BolC7t43492H' => 'bol', 'BolC7t46785H' => 'bol', 'BolC8t47853H' => 'bol', 'BolC9t56805H' => 'bol', 'BraA02t08000Z' => 'bra', 'BraA02t08341Z' => 'bra', 'BraA03t10936Z' => 'bra', 'BraA03t15657Z' => 'bra', 'BraA04t18100Z' => 'bra', 'BraA05t20523Z' => 'bra', 'BraA06t23353Z' => 'bra', 'BraA06t27473Z' => 'bra', 'BraA06t27769Z' => 'bra', 'BraA07t28928Z' => 'bra', 'BraA08t32236Z' => 'bra', 'BraA08t32841Z' => 'bra', 'BraA08t34524Z' => 'bra', 'BraA09t38742Z' => 'bra', 'BraA09t39295Z' => 'bra', 'C02p47180' => 'bna', 'C02p50990' => 'bna', 'C03p19360' => 'bna', 'C03p74950' => 'bna', 'C03p91000' => 'bna', 'C04p63260' => 'bna', 'C05p27050' => 'bna', 'C06p08750' => 'bna', 'C06p11490' => 'bna', 'C07p02820' => 'bna', 'C07p17180' => 'bna', 'C07p29440' => 'bna', 'C07p63730' => 'bna', 'C09p39260' => 'bna', 'CAN.G1164.34' => 'can', 'CAN.G1164.39' => 'can', 'CAN.G1530.3' => 'can', 'CAN.G162.61' => 'can', 'CAN.G176.6' => 'can', 'CAN.G289.49' => 'can', 'CAN.G370.21' => 'can', 'CAN.G370.22' => 'can', 'CAN.G371.117' => 'can', 'CAN.G58.37' => 'can', 'CAN.G588.98' => 'can', 'CANSAT21G2266' => 'cansat', 'CANSAT25G2799' => 'cansat', 'CANSAT35G0862' => 'cansat', 'CANSAT35G1704' => 'cansat', 'CANSAT35G1760' => 'cansat', 'CANSAT56G3971' => 'cansat', 'CANSAT56G4116' => 'cansat', 'CANSAT80G1259' => 'cansat', 'CARHR027730' => 'chi', 'CARHR033880' => 'chi', 'CARHR043270' => 'chi', 'CARHR145330' => 'chi', 'CARHR145340' => 'chi', 'CARHR175570' => 'chi', 'CARHR181570' => 'chi', 'CARHR258470' => 'chi', 'CARHR260490' => 'chi', 'CARHR294220' => 'chi', 'Carub.0001s2668' => 'cru', 'Carub.0001s3257' => 'cru', 'Carub.0001s4220' => 'cru', 'Carub.0005s0179' => 'cru', 'Carub.0006s2807' => 'cru', 'Carub.0007s0039' => 'cru', 'Carub.0008s0169' => 'cru', 'Carub.0008s0636' => 'cru', 'Ca_00338_v3' => 'car', 'Ca_00542_v3' => 'car', 'Ca_01844_v3' => 'car', 'Ca_10611_v3' => 'car', 'Ca_13326_v3' => 'car', 'Ca_17944_v3' => 'car', 'Ca_18546_v3' => 'car', 'Ca_24219_v3' => 'car', 'Ca_29972_v3' => 'car', 'CBR_g3681' => 'cbr', 'CBR_g40021' => 'cbr', 'Cc01_g08140' => 'ccan', 'Cc02_g13410' => 'ccan', 'Cc02_g37480' => 'ccan', 'Cc05_g12030' => 'ccan', 'Cc09_g03370' => 'ccan', 'Cc09_g10300' => 'ccan', 'Cc10_g03530' => 'ccan', 'Cc10_g11380' => 'ccan', 'CDE01G0176' => 'cde', 'CDE02G0675' => 'cde', 'CDE02G0942' => 'cde', 'CDE02G1153' => 'cde', 'CDE02G4177' => 'cde', 'CDE04G2117' => 'cde', 'CDE04G2736' => 'cde', 'CDE08G1161' => 'cde', 'CDE09G1238' => 'cde', 'Cfa000467' => 'cfa', 'Cfa000947' => 'cfa', 'Cfa004969' => 'cfa', 'Cfa005284' => 'cfa', 'Cfa008993' => 'cfa', 'Cfa018187' => 'cfa', 'Cfa018454' => 'cfa', 'Cfa020585' => 'cfa', 'Ciclev10000424m.g' => 'ccl', 'Ciclev10003605m.g' => 'ccl', 'Ciclev10007828m.g' => 'ccl', 'Ciclev10014620m.g' => 'ccl', 'Ciclev10015169m.g' => 'ccl', 'Ciclev10018291m.g' => 'ccl', 'Ciclev10028256m.g' => 'ccl', 'Ciclev10033822m.g' => 'ccl', 'CiPaw.05G060300' => 'cil', 'CiPaw.05G085000' => 'cil', 'CiPaw.06G083700' => 'cil', 'CiPaw.06G120300' => 'cil', 'CiPaw.09G060500' => 'cil', 'CiPaw.09G123800' => 'cil', 'CiPaw.11G169700' => 'cil', 'CiPaw.12G118300' => 'cil', 'CiPaw.15G071000' => 'cil', 'CiPaw.15G081900' => 'cil', 'ClCG01G024610' => 'cla', 'ClCG03G006070' => 'cla', 'ClCG05G019250' => 'cla', 'ClCG09G009500' => 'cla', 'ClCG11G008200' => 'cla', 'ClCG11G018080' => 'cla', 'COL.COLO4_17373' => 'col', 'COL.COLO4_22994' => 'col', 'COL.COLO4_26389' => 'col', 'COL.COLO4_27170' => 'col', 'COL.COLO4_31074' => 'col', 'COL.COLO4_31465' => 'col', 'COL.COLO4_36438' => 'col', 'COL.COLO4_36439' => 'col', 'Cpa.g.c38781' => 'cpa', 'Cpa.g.sc128.12' => 'cpa', 'Cpa.g.sc166.7' => 'cpa', 'Cpa.g.sc166.8' => 'cpa', 'Cpa.g.sc20.111' => 'cpa', 'Cpa.g.sc27.31' => 'cpa', 'Cpa.g.sc64.36' => 'cpa', 'Cpa.g.sc64.37' => 'cpa', 'Cpa.g.sc66.49' => 'cpa', 'Cpa.g.sc80.64' => 'cpa', 'CsaV3_1G012320' => 'csa', 'CsaV3_2G008480' => 'csa', 'CsaV3_2G033450' => 'csa', 'CsaV3_3G044830' => 'csa', 'CsaV3_4G033710' => 'csa', 'CsaV3_6G051730' => 'csa', 'CsaV3_7G025350' => 'csa', 'CSS0001067' => 'camsi', 'CSS0005996' => 'camsi', 'CSS0006590' => 'camsi', 'CSS0009673' => 'camsi', 'CSS0010201' => 'camsi', 'CSS0010549' => 'camsi', 'CSS0011364' => 'camsi', 'CSS0014473' => 'camsi', 'CSS0014961' => 'camsi', 'CSS0020191' => 'camsi', 'CSS0021165' => 'camsi', 'CSS0022306' => 'camsi', 'CSS0030591' => 'camsi', 'CSS0030696' => 'camsi', 'CSS0032653' => 'camsi', 'CSS0037487' => 'camsi', 'CSS0041102' => 'camsi', 'CSS0041261' => 'camsi', 'CSS0046246' => 'camsi', 'CSS0049256' => 'camsi', 'DCAR_004075' => 'dca', 'DCAR_011538' => 'dca', 'DCAR_019553' => 'dca', 'DCAR_020952' => 'dca', 'DCAR_021739' => 'dca', 'DCAR_027407' => 'dca', 'DCAR_027913' => 'dca', 'DCAR_028066' => 'dca', 'Dinv05899' => 'din', 'Dinv07563' => 'din', 'Dinv08010' => 'din', 'Dinv14125' => 'din', 'Dinv20172' => 'din', 'Dinv30743' => 'din', 'Dinv31229' => 'din', 'Dinv34162' => 'din', 'Dinv36028' => 'din', 'Dinv39368' => 'din', 'Dinv40565' => 'din', 'Dinv41706' => 'din', 'Duzib052G0089' => 'dzi', 'Duzib116G0641' => 'dzi', 'Duzib132G0069' => 'dzi', 'Duzib132G1219' => 'dzi', 'Duzib147G0278' => 'dzi', 'Duzib160G0480' => 'dzi', 'Duzib170G0661' => 'dzi', 'Duzib177G0591' => 'dzi', 'Duzib187G1353' => 'dzi', 'Duzib192G0858' => 'dzi', 'Duzib192G0883' => 'dzi', 'Duzib213G0506' => 'dzi', 'Duzib235G0289' => 'dzi', 'Duzib251G0422' => 'dzi', 'ECA232G3898' => 'eca', 'ECA233G5950' => 'eca', 'ECA234G1699' => 'eca', 'ECA234G2421' => 'eca', 'ECA236G0426' => 'eca', 'ECA236G4331' => 'eca', 'ECA248G2573' => 'eca', 'EL10Ac1g00077' => 'bvu', 'EL10Ac1g01746' => 'bvu', 'EL10Ac2g03464' => 'bvu', 'EL10Ac4g08176' => 'bvu', 'EL10Ac7g17521' => 'bvu', 'EL10Ac8g20386' => 'bvu', 'EL10Ac9g21343' => 'bvu', 'EL10Ac9g22688' => 'bvu', 'Eucgr.B03434' => 'egr', 'Eucgr.D00618' => 'egr', 'Eucgr.E02395' => 'egr', 'Eucgr.F01129' => 'egr', 'Eucgr.F02622' => 'egr', 'Eucgr.F04207' => 'egr', 'FAN01G0570' => 'fan', 'FAN03G3351' => 'fan', 'FAN06G3702' => 'fan', 'FAN07G2149' => 'fan', 'FAN10G3758' => 'fan', 'FAN11G1170' => 'fan', 'FAN11G2050' => 'fan', 'FAN11G2724' => 'fan', 'FAN12G1700' => 'fan', 'FAN12G2028' => 'fan', 'FAN15G1160' => 'fan', 'FAN15G3063' => 'fan', 'FAN16G2540' => 'fan', 'FAN16G3077' => 'fan', 'FAN16G3624' => 'fan', 'FAN17G0221' => 'fan', 'FAN20G2492' => 'fan', 'FAN20G2905' => 'fan', 'FAN21G0548' => 'fan', 'FAN21G1300' => 'fan', 'FAN22G0077' => 'fan', 'FAN22G1315' => 'fan', 'FAN24G1280' => 'fan', 'FAN24G1445' => 'fan', 'FAN24G3527' => 'fan', 'FAN25G0464' => 'fan', 'FAN25G2885' => 'fan', 'FAN25G3270' => 'fan', 'FAN27G1101' => 'fan', 'FAN27G2846' => 'fan', 'FAN27G3524' => 'fan', 'FvH4_2g11770' => 'fve', 'FvH4_2g15630' => 'fve', 'FvH4_3g05570' => 'fve', 'FvH4_3g09110' => 'fve', 'FvH4_3g19940' => 'fve', 'FvH4_4g04821' => 'fve', 'FvH4_4g31480' => 'fve', 'FvH4_7g01740' => 'fve', 'Glyma.05G130400' => 'gma', 'Glyma.05G156400' => 'gma', 'Glyma.07G197000' => 'gma', 'Glyma.08G085151' => 'gma', 'Glyma.08G114500' => 'gma', 'Glyma.08G300400' => 'gma', 'Glyma.10G215800' => 'gma', 'Glyma.12G224400' => 'gma', 'Glyma.13G179300' => 'gma', 'Glyma.13G218151' => 'gma', 'Glyma.13G238800' => 'gma', 'Glyma.13G276900' => 'gma', 'Glyma.14G078200' => 'gma', 'Glyma.15G074500' => 'gma', 'Glyma.15G094100' => 'gma', 'Glyma.17G247200' => 'gma', 'Glyma.18G120100' => 'gma', 'Glyma.20G176000' => 'gma', 'Gohir.A01G063600' => 'ghi', 'Gohir.A01G170301' => 'ghi', 'Gohir.A02G060500' => 'ghi', 'Gohir.A05G133850' => 'ghi', 'Gohir.A05G161400' => 'ghi', 'Gohir.A06G012900' => 'ghi', 'Gohir.A06G035901' => 'ghi', 'Gohir.A06G127100' => 'ghi', 'Gohir.A06G210500' => 'ghi', 'Gohir.A08G008650' => 'ghi', 'Gohir.A09G072700' => 'ghi', 'Gohir.A09G088301' => 'ghi', 'Gohir.A10G040600' => 'ghi', 'Gohir.A12G036300' => 'ghi', 'Gohir.A12G143350' => 'ghi', 'Gohir.A12G165500' => 'ghi', 'Gohir.A13G145700' => 'ghi', 'Gohir.D01G050000' => 'ghi', 'Gohir.D01G051366' => 'ghi', 'Gohir.D01G161350' => 'ghi', 'Gohir.D02G065900' => 'ghi', 'Gohir.D05G164200' => 'ghi', 'Gohir.D05G355500' => 'ghi', 'Gohir.D06G010400' => 'ghi', 'Gohir.D06G111250' => 'ghi', 'Gohir.D06G132000' => 'ghi', 'Gohir.D06G210500' => 'ghi', 'Gohir.D07G165675' => 'ghi', 'Gohir.D08G062240' => 'ghi', 'Gohir.D08G086101' => 'ghi', 'Gohir.D08G138060' => 'ghi', 'Gohir.D09G072300' => 'ghi', 'Gohir.D10G041400' => 'ghi', 'Gohir.D11G191020' => 'ghi', 'Gohir.D11G212066' => 'ghi', 'Gohir.D12G036300' => 'ghi', 'Gohir.D12G168600' => 'ghi', 'Gohir.D13G150600' => 'ghi', 'Gorai.001G057300' => 'gra', 'Gorai.002G069900' => 'gra', 'Gorai.002G200000' => 'gra', 'Gorai.003G067600' => 'gra', 'Gorai.005G074800' => 'gra', 'Gorai.006G087300' => 'gra', 'Gorai.008G037500' => 'gra', 'Gorai.008G181400' => 'gra', 'Gorai.009G169400' => 'gra', 'Gorai.009G387900' => 'gra', 'Gorai.010G013300' => 'gra', 'Gorai.010G153800' => 'gra', 'Gorai.010G255800' => 'gra', 'Gorai.011G043700' => 'gra', 'Gorai.011G198900' => 'gra', 'Gorai.013G168400' => 'gra', 'GSVIVG01005212001' => 'vvi', 'GSVIVG01006163001' => 'vvi', 'GSVIVG01009625001' => 'vvi', 'GSVIVG01014338001' => 'vvi', 'GSVIVG01020005001' => 'vvi', 'GSVIVG01021450001' => 'vvi', 'GSVIVG01023975001' => 'vvi', 'GSVIVG01034490001' => 'vvi', 'HanXRQChr04g0112071' => 'han', 'HanXRQChr05g0131151' => 'han', 'HanXRQChr09g0262371' => 'han', 'HanXRQChr09g0268401' => 'han', 'HanXRQChr10g0279241' => 'han', 'HanXRQChr10g0297961' => 'han', 'HanXRQChr11g0326231' => 'han', 'HanXRQChr11g0328471' => 'han', 'HanXRQChr16g0507941' => 'han', 'HanXRQChr17g0560211' => 'han', 'Haze_02108' => 'cav', 'Haze_02428' => 'cav', 'Haze_05593' => 'cav', 'Haze_06448' => 'cav', 'Haze_09427' => 'cav', 'Haze_12022' => 'cav', 'Haze_17612' => 'cav', 'Haze_17928' => 'cav', 'Hma1.2p1_0032F.1_g019250' => 'hma', 'Hma1.2p1_0163F.1_g072690' => 'hma', 'Hma1.2p1_0265F.1_g106710' => 'hma', 'Hma1.2p1_0286F.1_g113970' => 'hma', 'Hma1.2p1_0363F.1_g136640' => 'hma', 'Hma1.2p1_0584F.1_g183470' => 'hma', 'Hma1.2p1_0885F.1_g232570' => 'hma', 'HPP92_006022' => 'vpl', 'HPP92_007320' => 'vpl', 'HPP92_011521' => 'vpl', 'HPP92_019387' => 'vpl', 'HPP92_024038' => 'vpl', 'Hund05891' => 'sun', 'Hund06450' => 'sun', 'Hund12053' => 'sun', 'Hund16800' => 'sun', 'Hund21222' => 'sun', 'Hund22896' => 'sun', 'Hund23746' => 'sun', 'Hund27083' => 'sun', 'Lalb_Chr02g0141831' => 'lal', 'Lalb_Chr02g0141841' => 'lal', 'Lalb_Chr05g0220411' => 'lal', 'Lalb_Chr06g0162081' => 'lal', 'Lalb_Chr09g0327651' => 'lal', 'Lalb_Chr13g0295051' => 'lal', 'Lalb_Chr15g0086801' => 'lal', 'Lalb_Chr16g0383781' => 'lal', 'Lalb_Chr16g0383791' => 'lal', 'Lalb_Chr18g0055441' => 'lal', 'Lalb_Chr18g0059611' => 'lal', 'Lalb_Chr20g0109661' => 'lal', 'Lalb_Chr20g0109831' => 'lal', 'Lalb_Chr20g0121871' => 'lal', 'Lalb_Chr22g0355361' => 'lal', 'Lalb_Chr25g0286371' => 'lal', 'Lj1A1187G43' => 'lonja', 'Lj1A1205T50' => 'lonja', 'Lj1A800G33' => 'lonja', 'Lj1C1187T7' => 'lonja', 'Lj1C843T11' => 'lonja', 'Lj1g0010940' => 'lja', 'Lj2A288T69' => 'lonja', 'Lj3g0024276' => 'lja', 'Lj4A47T76' => 'lonja', 'Lj4g0005805' => 'lja', 'Lj4g0006097' => 'lja', 'Lj4g0008528' => 'lja', 'Lj4g0024907' => 'lja', 'Lj5g0012472' => 'lja', 'Lj5g0018648' => 'lja', 'Lj6C789G1' => 'lonja', 'Lj6g0004000' => 'lja', 'Lj7A292G67' => 'lonja', 'Lj7A292T64' => 'lonja', 'Lj9A400T58' => 'lonja', 'Lsat_1_v5_gn_1_126181' => 'lsa', 'Lsat_1_v5_gn_4_123041' => 'lsa', 'Lsat_1_v5_gn_4_133620' => 'lsa', 'Lsat_1_v5_gn_4_53221' => 'lsa', 'Lsat_1_v5_gn_4_71961' => 'lsa', 'Lsat_1_v5_gn_7_105241' => 'lsa', 'Lsat_1_v5_gn_7_21361' => 'lsa', 'Lsat_1_v5_gn_7_28860' => 'lsa', 'Lsat_1_v5_gn_7_31260' => 'lsa', 'Lsat_1_v5_gn_8_52801' => 'lsa', 'Manes.02G191400' => 'mes', 'Manes.03G110100' => 'mes', 'Manes.04G071100' => 'mes', 'Manes.05G100500' => 'mes', 'Manes.05G164700' => 'mes', 'Manes.15G087000' => 'mes', 'Manes.15G121500' => 'mes', 'Manes.16G028300' => 'mes', 'Manes.17G046100' => 'mes', 'Manes.17G069800' => 'mes', 'Manes.18G100500' => 'mes', 'Mapoly0002s0109' => 'mpo', 'Mapoly0024s0007' => 'mpo', 'Mapoly0089s0032' => 'mpo', 'MBI04_g42241_MAGBIO' => 'mbi', 'MBI05_g11988_MAGBIO' => 'mbi', 'MBI05_g35452_MAGBIO' => 'mbi', 'MBI07_g30179_MAGBIO' => 'mbi', 'MBI07_g35859_MAGBIO' => 'mbi', 'MBI07_g35860_MAGBIO' => 'mbi', 'MBI07_g37166_MAGBIO' => 'mbi', 'MBI08_g18172_MAGBIO' => 'mbi', 'MBI09_g08441_MAGBIO' => 'mbi', 'MBI13_g01676_MAGBIO' => 'mbi', 'MBI14_g42955_MAGBIO' => 'mbi', 'MBI16_g13161_MAGBIO' => 'mbi', 'MBI17_g27204_MAGBIO' => 'mbi', 'MBI19_g21595_MAGBIO' => 'mbi', 'MD00G1148400' => 'mdo', 'MD02G1301200' => 'mdo', 'MD03G1227800' => 'mdo', 'MD05G1041100' => 'mdo', 'MD05G1124800' => 'mdo', 'MD05G1284000' => 'mdo', 'MD05G1338800' => 'mdo', 'MD05G1338900' => 'mdo', 'MD07G1022800' => 'mdo', 'MD10G1047500' => 'mdo', 'MD10G1127500' => 'mdo', 'MD10G1262300' => 'mdo', 'MD10G1293800' => 'mdo', 'MD16G1074300' => 'mdo', 'Medtr1g021670' => 'mtr', 'Medtr1g096320' => 'mtr', 'Medtr2g013690' => 'mtr', 'Medtr2g019450' => 'mtr', 'Medtr2g085170' => 'mtr', 'Medtr4g088785' => 'mtr', 'Medtr8g055930' => 'mtr', 'Medtr8g085850' => 'mtr', 'MELO3C002605.2' => 'cme', 'MELO3C003891.2' => 'cme', 'MELO3C004012.2' => 'cme', 'MELO3C007134.2' => 'cme', 'MELO3C008118.2' => 'cme', 'MELO3C016700.2' => 'cme', 'MELO3C024127.2' => 'cme', 'MELO3C033361.2' => 'cme', 'MELO3C033362.2' => 'cme', 'Migut.C00430' => 'egut', 'Migut.C01246' => 'egut', 'Migut.E00101' => 'egut', 'Migut.H01486' => 'egut', 'Migut.H01939' => 'egut', 'Migut.K00360' => 'egut', 'Migut.M00910' => 'egut', 'Migut.M01139' => 'egut', 'Migut.N02677' => 'egut', 'MSTRG.13252' => 'ama', 'MSTRG.14701' => 'ama', 'MSTRG.1521' => 'ama', 'MSTRG.15884' => 'ama', 'MSTRG.16242' => 'ama', 'MSTRG.22285' => 'ama', 'MSTRG.22444' => 'ama', 'MSTRG.2349' => 'ama', 'MSTRG.26308' => 'ama', 'MSTRG.28296' => 'ama', 'MSTRG.9895' => 'ama', 'Nitab4.5_0000110g0060' => 'nta', 'Nitab4.5_0000420g0130' => 'nta', 'Nitab4.5_0000422g0030' => 'nta', 'Nitab4.5_0000560g0180' => 'nta', 'Nitab4.5_0000703g0100' => 'nta', 'Nitab4.5_0000786g0200' => 'nta', 'Nitab4.5_0001336g0020' => 'nta', 'Nitab4.5_0001796g0030' => 'nta', 'Nitab4.5_0003348g0060' => 'nta', 'Nitab4.5_0003698g0040' => 'nta', 'Nitab4.5_0003942g0090' => 'nta', 'Nitab4.5_0004775g0070' => 'nta', 'Nitab4.5_0004864g0030' => 'nta', 'Nitab4.5_0005615g0020' => 'nta', 'Nitab4.5_0009288g0030' => 'nta', 'Nitab4.5_0009341g0010' => 'nta', 'Nitab4.5_0009535g0010' => 'nta', 'Nn1g03995' => 'nnu', 'Nn1g04100' => 'nnu', 'Nn1g06530' => 'nnu', 'Nn3g16404' => 'nnu', 'Nn3g17212' => 'nnu', 'Nn3g20776' => 'nnu', 'Nn3g21923' => 'nnu', 'Nn5g27737' => 'nnu', 'Nn5g29461' => 'nnu', 'Nn7g38355' => 'nnu', 'Nn8g39873' => 'nnu', 'Oeu000548.2' => 'oeu', 'Oeu004672.1' => 'oeu', 'Oeu015605.2' => 'oeu', 'Oeu016092.1' => 'oeu', 'Oeu017879.3' => 'oeu', 'Oeu024910.1' => 'oeu', 'Oeu028965.1' => 'oeu', 'Oeu031269.1' => 'oeu', 'Oeu031270.1' => 'oeu', 'Oeu032535.1' => 'oeu', 'Oeu034151.1' => 'oeu', 'Oeu034152.1' => 'oeu', 'Oeu034588.2' => 'oeu', 'Oeu050846.1' => 'oeu', 'Oeu050849.2' => 'oeu', 'Oeu051063.2' => 'oeu', 'Oeu052368.1' => 'oeu', 'Oeu052370.1' => 'oeu', 'Os01g0210400' => 'osa', 'Os01g0304300' => 'osa', 'Os01g0749100' => 'osa', 'Os02g0745800' => 'osa', 'Os03g0769050' => 'osa', 'Os05g0531500' => 'osa', 'Os06g0724300' => 'osa', 'Os11g0198100' => 'osa', 'Peaxi162Scf00069g01425' => 'pax', 'Peaxi162Scf00280g00811' => 'pax', 'Peaxi162Scf00310g00615' => 'pax', 'Peaxi162Scf00362g00542' => 'pax', 'Peaxi162Scf00461g00310' => 'pax', 'Peaxi162Scf00530g00118' => 'pax', 'Peaxi162Scf00541g00057' => 'pax', 'Peaxi162Scf00661g00017' => 'pax', 'Peaxi162Scf00926g00027' => 'pax', 'Peaxi162Scf01064g00263' => 'pax', 'Peaxi162Scf01211g00135' => 'pax', 'PGR004G2336' => 'pgr', 'PGR042G0327' => 'pgr', 'PGR042G1957' => 'pgr', 'PGR042G2003' => 'pgr', 'PGR042G3929' => 'pgr', 'PGR083G1137' => 'pgr', 'PGR083G1364' => 'pgr', 'PGSC0003DMG400003381' => 'stu', 'PGSC0003DMG400003417' => 'stu', 'PGSC0003DMG400008981' => 'stu', 'PGSC0003DMG400012417' => 'stu', 'PGSC0003DMG400012823' => 'stu', 'PGSC0003DMG400016885' => 'stu', 'PGSC0003DMG400022812' => 'stu', 'PGSC0003DMG400029726' => 'stu', 'PGSC0003DMG401009243' => 'stu', 'PGSC0003DMG401031505' => 'stu', 'PGSC0003DMG402031505' => 'stu', 'Phvul.001G017600' => 'pvu', 'Phvul.002G193500' => 'pvu', 'Phvul.002G228900' => 'pvu', 'Phvul.002G236800' => 'pvu', 'Phvul.003G049500' => 'pvu', 'Phvul.005G072000' => 'pvu', 'Phvul.006G164800' => 'pvu', 'Phvul.006G185100' => 'pvu', 'Phvul.007G090000' => 'pvu', 'Potri.001G399800' => 'ptr', 'Potri.002G149900' => 'ptr', 'Potri.004G044100' => 'ptr', 'Potri.004G177600' => 'ptr', 'Potri.009G138000' => 'ptr', 'Potri.010G094000' => 'ptr', 'Potri.011G053000' => 'ptr', 'Potri.011G119300' => 'ptr', 'Potri.013G113700' => 'ptr', 'Potri.018G107800' => 'ptr', 'Potri.019G084100' => 'ptr', 'Pp3c14_23720' => 'ppa', 'Pp3c16_6340' => 'ppa', 'Pp3c23_13420' => 'ppa', 'Pp3c24_2740' => 'ppa', 'Pp3c25_860' => 'ppa', 'Pp3c8_21750' => 'ppa', 'Prupe.1G273000' => 'ppe', 'Prupe.1G273700' => 'ppe', 'Prupe.1G274100' => 'ppe', 'Prupe.2G023300' => 'ppe', 'Prupe.4G048000' => 'ppe', 'Prupe.4G080400' => 'ppe', 'Prupe.4G181200' => 'ppe', 'Prupe.8G056900' => 'ppe', 'Prupe.8G168700' => 'ppe', 'Psat1g189080' => 'psa', 'Psat1g204760' => 'psa', 'Psat4g175560' => 'psa', 'Psat4g177720' => 'psa', 'Psat5g244240' => 'psa', 'Psat6g010720' => 'psa', 'Psat6g187200' => 'psa', 'Psat7g072040' => 'psa', 'PSO017G3501' => 'pso', 'PSO063G2148' => 'pso', 'PSO063G5608' => 'pso', 'PSO210G6392' => 'pso', 'PSO541G2319' => 'pso', 'PSO541G2836' => 'pso', 'PSO541G4012' => 'pso', 'PSO541G6253' => 'pso', 'PSO675G0580' => 'pso', 'PSO675G0856' => 'pso', 'PSO675G5635' => 'pso', 'PSO675G9157' => 'pso', 'PSO832G1660' => 'pso', 'PSO832G1969' => 'pso', 'QL02p007186' => 'qlo', 'QL02p033904' => 'qlo', 'QL03p064391' => 'qlo', 'QL05p040593' => 'qlo', 'QL05p058242' => 'qlo', 'QL08p021825' => 'qlo', 'QL11p004981' => 'qlo', 'RcHm_v2.0_Chr1g0318301' => 'rch', 'RcHm_v2.0_Chr4g0418501' => 'rch', 'RcHm_v2.0_Chr4g0439971' => 'rch', 'RcHm_v2.0_Chr5g0008541' => 'rch', 'RcHm_v2.0_Chr5g0014101' => 'rch', 'RcHm_v2.0_Chr5g0014131' => 'rch', 'RcHm_v2.0_Chr5g0033621' => 'rch', 'RcHm_v2.0_Chr6g0272041' => 'rch', 'RcHm_v2.0_Chr6g0278831' => 'rch', 'Rhsim02G0130400' => 'rsi', 'Rhsim02G0171100' => 'rsi', 'Rhsim05G0053000' => 'rsi', 'Rhsim05G0053100' => 'rsi', 'Rhsim06G0096500' => 'rsi', 'Rhsim06G0096600' => 'rsi', 'Rhsim06G0199100' => 'rsi', 'Rhsim12G0062300' => 'rsi', 'Rhsim12G0062800' => 'rsi', 'Sabra02G0118600' => 'sbr', 'Sabra04G0027300' => 'sbr', 'Sabra04G0119500' => 'sbr', 'Sabra08G0112500' => 'sbr', 'Sabra11G0036800' => 'sbr', 'Sabra11G0103800' => 'sbr', 'Sabra13G0096300' => 'sbr', 'Sabra16G0262300' => 'sbr', 'Sabra18G0091700' => 'sbr', 'Sabra19G0095400' => 'sbr', 'SalBow6G3080' => 'sbo', 'SalBow7G1157' => 'sbo', 'SalBow7G2123' => 'sbo', 'SalBow7G2285' => 'sbo', 'SalBow7G3537' => 'sbo', 'SalBow8G2947' => 'sbo', 'SalBow8G4463' => 'sbo', 'SalBow8G5466' => 'sbo', 'Sc01g0001750' => 'sci', 'Sc02g0006640' => 'sci', 'Sc02g0006670' => 'sci', 'Sc04g0008220' => 'sci', 'Sc05g0006190' => 'sci', 'Sc08g0002760' => 'sci', 'Sc17g0006170' => 'sci', 'Sc22g0002050' => 'sci', 'Sc23g0001190' => 'sci', 'Sc24g0000980' => 'sci', 'Sed0006245' => 'sed', 'Sed0007543' => 'sed', 'Sed0009411' => 'sed', 'Sed0010765' => 'sed', 'Sed0012944' => 'sed', 'Sed0014682' => 'sed', 'Sed0016174' => 'sed', 'Sed0016796' => 'sed', 'Sed0020317' => 'sed', 'Sed0021467' => 'sed', 'SEGI_01316' => 'sgi', 'SEGI_03374' => 'sgi', 'SEGI_16265' => 'sgi', 'SEGI_18569' => 'sgi', 'SEGI_20351' => 'sgi', 'SEGI_26395' => 'sgi', 'SEGI_29469' => 'sgi', 'SEGI_34771' => 'sgi', 'SEGI_36769' => 'sgi', 'SEGI_37139' => 'sgi', 'SGA_v2.0_scaffold100G29687' => 'sas', 'SGA_v2.0_scaffold118G32472' => 'sas', 'SGA_v2.0_scaffold14G07051' => 'sas', 'SGA_v2.0_scaffold183G39845' => 'sas', 'SGA_v2.0_scaffold1G00174' => 'sas', 'SGA_v2.0_scaffold22G09714' => 'sas', 'SGA_v2.0_scaffold333G48992' => 'sas', 'SGA_v2.0_scaffold46G17491' => 'sas', 'SGA_v2.0_scaffold49G18294' => 'sas', 'SGA_v2.0_scaffold63G21658' => 'sas', 'SHI01741' => 'shi', 'SHI05771' => 'shi', 'SHI18077' => 'shi', 'SHI20525' => 'shi', 'SHI20527' => 'shi', 'SHI20528' => 'shi', 'SMO172G0185' => 'smo', 'SMO198G0020' => 'smo', 'SMO351G0006' => 'smo', 'SMO356G0118' => 'smo', 'SMO358G0296' => 'smo', 'SMO367G0079' => 'smo', 'SMO367G1277' => 'smo', 'Solyc01g014220.3' => 'sly', 'Solyc01g111770.2' => 'sly', 'Solyc02g078180.3' => 'sly', 'Solyc03g006430.3' => 'sly', 'Solyc03g006456.1' => 'sly', 'Solyc03g079860.2' => 'sly', 'Solyc04g079770.3' => 'sly', 'Solyc05g007430.4' => 'sly', 'Solyc07g063150.3' => 'sly', 'Solyc08g016620.3' => 'sly', 'Solyc09g057590.3' => 'sly', 'Solyc09g057600.1' => 'sly', 'Solyc10g009050.3' => 'sly', 'Solyc11g017420.2' => 'sly', 'Sopen01g053810' => 'spe', 'Sopen02g023040' => 'spe', 'Sopen03g002440' => 'spe', 'Sopen04g033350' => 'spe', 'Sopen05g003310' => 'spe', 'Sopen07g004050' => 'spe', 'Sopen07g031340' => 'spe', 'Sopen08g006990' => 'spe', 'Sopen10g004830' => 'spe', 'Sopen11g009370' => 'spe', 'Sp1g24450' => 'spa', 'Sp1g29670' => 'spa', 'Sp1g39600' => 'spa', 'Sp2g11080' => 'spa', 'Sp2g13970' => 'spa', 'Sp4g16130' => 'spa', 'Sp6g13080' => 'spa', 'Sp7g37270' => 'spa', 'TAR371G0065' => 'tar', 'TAR376G0340' => 'tar', 'TAR376G0435' => 'tar', 'TAR381G0002' => 'tar', 'TAR381G1236' => 'tar', 'TAR624G0055' => 'tar', 'TAR624G0324' => 'tar', 'TAR624G0696' => 'tar', 'TAR624G0906' => 'tar', 'TAR625G0107' => 'tar', 'TAR626G0015' => 'tar', 'TAR626G1356' => 'tar', 'TAR627G0888' => 'tar', 'TAR628G0399' => 'tar', 'TAR628G1327' => 'tar', 'TAR629G2831' => 'tar', 'TAR629G2874' => 'tar', 'TAR633G1432' => 'tar', 'TAR633G2771' => 'tar', 'THA.LOC104803394' => 'tha', 'THA.LOC104805153' => 'tha', 'THA.LOC104806784' => 'tha', 'THA.LOC104810473' => 'tha', 'THA.LOC104813100' => 'tha', 'THA.LOC104814215' => 'tha', 'THA.LOC104815554' => 'tha', 'THA.LOC104820544' => 'tha', 'THA.LOC104824754' => 'tha', 'THA.LOC104827717' => 'tha', 'Thecc.02G031400' => 'tca', 'Thecc.02G055900' => 'tca', 'Thecc.02G350800' => 'tca', 'Thecc.06G150900' => 'tca', 'Thecc.06G186600' => 'tca', 'Thecc.07G089600' => 'tca', 'Thecc.08G020400' => 'tca', 'Thecc.08G182100' => 'tca', 'Thhalv10000873m.g' => 'esa', 'Thhalv10004185m.g' => 'esa', 'Thhalv10006981m.g' => 'esa', 'Thhalv10007204m.g' => 'esa', 'Thhalv10011374m.g' => 'esa', 'Thhalv10013482m.g' => 'esa', 'Thhalv10017801m.g' => 'esa', 'Thhalv10024983m.g' => 'esa', 'TPR.G12072' => 'tpr', 'TPR.G15769' => 'tpr', 'TPR.G16504' => 'tpr', 'TPR.G16506' => 'tpr', 'TPR.G24345' => 'tpr', 'TPR.G26666' => 'tpr', 'TPR.G27320' => 'tpr', 'TPR.G31819' => 'tpr', 'TPR.G38879' => 'tpr', 'TPR.G39015' => 'tpr', 'TPR.G8819' => 'tpr', 'TWI09G0924' => 'twi', 'TWI12G0811' => 'twi', 'TWI12G1294' => 'twi', 'TWI31G0150' => 'twi', 'TWI36G1262' => 'twi', 'TWI38G1287' => 'twi', 'TWI38G1633' => 'twi', 'TWI38G1982' => 'twi', 'TWI39G0116' => 'twi', 'TWI60G1011' => 'twi', 'TWI63G0171' => 'twi', 'TWI73G0839' => 'twi', 'TWI79G1511' => 'twi', 'unitig_0.g915' => 'ugi', 'unitig_0.g916' => 'ugi', 'unitig_21.g20219' => 'ugi', 'unitig_21.g20416' => 'ugi', 'unitig_578.g16132' => 'ugi', 'unitig_578.g16718' => 'ugi', 'unitig_62.g23481' => 'ugi', 'unitig_744.g24535' => 'ugi', 'unitig_749.g13525' => 'ugi', 'vmacro01248' => 'vma', 'vmacro02290' => 'vma', 'vmacro10946' => 'vma', 'vmacro11865' => 'vma', 'vmacro12493' => 'vma', 'vmacro17322' => 'vma', 'vmacro21599' => 'vma', 'vmacro23041' => 'vma', 'VMungo0251G0004' => 'vmu', 'VMungo0251G2639' => 'vmu', 'VMungo0251G2967' => 'vmu', 'VMungo0540G0864' => 'vmu', 'VMungo0540G1569' => 'vmu', 'VMungo0647G0317' => 'vmu', 'VMungo0720G1373' => 'vmu', 'VMungo0720G1508' => 'vmu', 'VMungo1080G0485' => 'vmu', 'VMungo1215G3177' => 'vmu', 'Zm00001eb112600' => 'zma', 'Zm00001eb120220' => 'zma', 'Zm00001eb153240' => 'zma', 'Zm00001eb168880' => 'zma', 'Zm00001eb213920' => 'zma', 'Zm00001eb228280' => 'zma', 'Zm00001eb254580' => 'zma', 'Zm00001eb272180' => 'zma', 'Zm00001eb293190' => 'zma', 'Zm00001eb322930' => 'zma', 'Zm00001eb353360' => 'zma', 'Zm00001eb353390' => 'zma', 'Zm00001eb353430' => 'zma', 'Zm00001eb353440' => 'zma', 'Zm00001eb353780' => 'zma' ), 'gf_id' => 'HOM05D000499', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000499' ), 'data_identifier' => 'HOM05D000499', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000499', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1066', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p29780' => 'bna', 'A02p33180' => 'bna', 'A03p16470' => 'bna', 'A03p66010' => 'bna', 'A04p25970' => 'bna', 'A06p01270' => 'bna', 'A06p46080' => 'bna', 'A07p11400' => 'bna', 'A08p01840' => 'bna', 'A08p08230' => 'bna', 'A08p25740' => 'bna', 'A09p32070' => 'bna', 'A09p37830' => 'bna', 'A09p42840' => 'bna', 'A09p42850' => 'bna', 'Aa31LG10G2060' => 'aar', 'Aa31LG2G7410' => 'aar', 'Aa31LG6G10200' => 'aar', 'Aa31LG6G16680' => 'aar', 'Aa31LG6G8470' => 'aar', 'Aa31LG9G12730' => 'aar', 'Aa31LG9G13680' => 'aar', 'Aa31LG9G14920' => 'aar', 'Aa31LG9G6650' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4977' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5467' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3254' => 'aag', 'Actinidia02578' => 'ach', 'Actinidia07693' => 'ach', 'Actinidia08413' => 'ach', 'Actinidia08414' => 'ach', 'Actinidia15289' => 'ach', 'Actinidia19871' => 'ach', 'Actinidia21475' => 'ach', 'Actinidia22576' => 'ach', 'Actinidia28327' => 'ach', 'Actinidia32491' => 'ach', 'Actinidia39463' => 'ach', 'Actinidia39571' => 'ach', 'Ah.01g013750' => 'amhyb', 'Ah.01g023210' => 'amhyb', 'Ah.04g164850' => 'amhyb', 'Ah.05g178060' => 'amhyb', 'Ah.07g204270' => 'amhyb', 'Ah.07g208480' => 'amhyb', 'Ah.09g237410' => 'amhyb', 'Ah.14g089460' => 'amhyb', 'AL1G41790' => 'aly', 'AL1G49050' => 'aly', 'AL1G53810' => 'aly', 'AL1G61400' => 'aly', 'AL4G18580' => 'aly', 'AL5G12510' => 'aly', 'AL5G12540' => 'aly', 'AL6G43230' => 'aly', 'AL7G10370' => 'aly', 'AL7G19250' => 'aly', 'AL8G12240' => 'aly', 'AL8G18540' => 'aly', 'Aqoxy1G02409' => 'aox', 'Aqoxy2G03993' => 'aox', 'Aqoxy3G03357' => 'aox', 'Aqoxy4G00785' => 'aox', 'Aqoxy5G02598' => 'aox', 'Aqoxy6G00132' => 'aox', 'Aqoxy7G01776' => 'aox', 'Aqoxy7G02316' => 'aox', 'Aqoxy7G03973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.12AFKW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B8730' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27IQR1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3F75VG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3RE0GA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41TCQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.527VTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FIR39' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5W8UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DA38EV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ63HS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H1I32C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HC27T5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4M8AP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7N3CZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9UVDZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LS1NQA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT1D4B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SKC4TM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCFV76' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF9Q1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQWD9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1ZM88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WE07RT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YCK7VH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJE6Q6' => 'arhy', 'AT1G28240' => 'ath', 'AT1G34550' => 'ath', 'AT1G53040' => 'ath', 'AT2G02910' => 'ath', 'AT4G09630' => 'ath', 'AT4G38500' => 'ath', 'AT5G42660' => 'ath', 'AT5G46220' => 'ath', 'ATR0152G026' => 'atr', 'ATR0564G343' => 'atr', 'ATR0706G151' => 'atr', 'ATR0733G207' => 'atr', 'ATR0751G234' => 'atr', 'ATR0807G048' => 'atr', 'ATR1091G084' => 'atr', 'Atru.chr10.1229' => 'acertr', 'Atru.chr10.1230' => 'acertr', 'Atru.chr10.1874' => 'acertr', 'Atru.chr11.1808' => 'acertr', 'Atru.chr13.1795' => 'acertr', 'Atru.chr13.570' => 'acertr', 'Atru.chr2.2608' => 'acertr', 'Atru.chr2.2609' => 'acertr', 'Atru.chr5.3428' => 'acertr', 'Atru.chr8.1171' => 'acertr', 'AUR62004651' => 'cqu', 'AUR62008675' => 'cqu', 'AUR62010014' => 'cqu', 'AUR62013004' => 'cqu', 'AUR62014825' => 'cqu', 'AUR62015015' => 'cqu', 'AUR62015151' => 'cqu', 'AUR62017020' => 'cqu', 'AUR62019422' => 'cqu', 'AUR62023570' => 'cqu', 'AUR62025571' => 'cqu', 'AUR62029098' => 'cqu', 'AUR62033863' => 'cqu', 'AUR62034296' => 'cqu', 'AUR62040075' => 'cqu', 'BcaB02g07334' => 'bca', 'BcaB02g10575' => 'bca', 'BcaB03g12119' => 'bca', 'BcaB03g12120' => 'bca', 'BcaB03g13945' => 'bca', 'BcaB04g17123' => 'bca', 'BcaB04g17867' => 'bca', 'BcaB04g19839' => 'bca', 'BcaB07g30317' => 'bca', 'BcaB07g32432' => 'bca', 'BcaB07g33362' => 'bca', 'BcaB08g36611' => 'bca', 'BcaC01g00028' => 'bca', 'BcaC01g01356' => 'bca', 'BcaC01g02034' => 'bca', 'BcaC01g06051' => 'bca', 'BcaC03g16839' => 'bca', 'BcaC03g17176' => 'bca', 'BcaC05g26829' => 'bca', 'BcaC06g31490' => 'bca', 'BcaC06g35344' => 'bca', 'BcaC06g36570' => 'bca', 'BcaC07g37537' => 'bca', 'BcaC08g43491' => 'bca', 'BcaC08g43773' => 'bca', 'BcaNung00234' => 'bca', 'BcaNung01982' => 'bca', 'BcaNung03707' => 'bca', 'BcaNung06454' => 'bca', 'BolC2t10762H' => 'bol', 'BolC2t11191H' => 'bol', 'BolC3t14322H' => 'bol', 'BolC3t19747H' => 'bol', 'BolC3t21425H' => 'bol', 'BolC4t27800H' => 'bol', 'BolC5t31423H' => 'bol', 'BolC6t35951H' => 'bol', 'BolC6t36282H' => 'bol', 'BolC7t40678H' => 'bol', 'BolC7t40679H' => 'bol', 'BolC7t42222H' => 'bol', 'BolC7t43492H' => 'bol', 'BolC7t46785H' => 'bol', 'BolC8t47853H' => 'bol', 'BolC9t56805H' => 'bol', 'BraA02t08000Z' => 'bra', 'BraA02t08341Z' => 'bra', 'BraA03t10936Z' => 'bra', 'BraA03t15657Z' => 'bra', 'BraA04t18100Z' => 'bra', 'BraA05t20523Z' => 'bra', 'BraA06t23353Z' => 'bra', 'BraA06t27473Z' => 'bra', 'BraA06t27769Z' => 'bra', 'BraA07t28928Z' => 'bra', 'BraA08t32236Z' => 'bra', 'BraA08t32841Z' => 'bra', 'BraA08t34524Z' => 'bra', 'BraA09t38742Z' => 'bra', 'BraA09t39295Z' => 'bra', 'C02p47180' => 'bna', 'C02p50990' => 'bna', 'C03p19360' => 'bna', 'C03p74950' => 'bna', 'C03p91000' => 'bna', 'C04p63260' => 'bna', 'C05p27050' => 'bna', 'C06p08750' => 'bna', 'C06p11490' => 'bna', 'C07p02820' => 'bna', 'C07p17180' => 'bna', 'C07p29440' => 'bna', 'C07p63730' => 'bna', 'C09p39260' => 'bna', 'CAN.G1164.34' => 'can', 'CAN.G1164.39' => 'can', 'CAN.G1530.3' => 'can', 'CAN.G162.61' => 'can', 'CAN.G176.6' => 'can', 'CAN.G289.49' => 'can', 'CAN.G370.21' => 'can', 'CAN.G370.22' => 'can', 'CAN.G371.117' => 'can', 'CAN.G58.37' => 'can', 'CAN.G588.98' => 'can', 'CANSAT21G2266' => 'cansat', 'CANSAT25G2799' => 'cansat', 'CANSAT35G0862' => 'cansat', 'CANSAT35G1704' => 'cansat', 'CANSAT35G1760' => 'cansat', 'CANSAT56G3971' => 'cansat', 'CANSAT56G4116' => 'cansat', 'CANSAT80G1259' => 'cansat', 'CARHR027730' => 'chi', 'CARHR033880' => 'chi', 'CARHR043270' => 'chi', 'CARHR145330' => 'chi', 'CARHR145340' => 'chi', 'CARHR175570' => 'chi', 'CARHR181570' => 'chi', 'CARHR258470' => 'chi', 'CARHR260490' => 'chi', 'CARHR294220' => 'chi', 'Carub.0001s2668' => 'cru', 'Carub.0001s3257' => 'cru', 'Carub.0001s4220' => 'cru', 'Carub.0005s0179' => 'cru', 'Carub.0006s2807' => 'cru', 'Carub.0007s0039' => 'cru', 'Carub.0008s0169' => 'cru', 'Carub.0008s0636' => 'cru', 'Ca_00338_v3' => 'car', 'Ca_00542_v3' => 'car', 'Ca_01844_v3' => 'car', 'Ca_10611_v3' => 'car', 'Ca_13326_v3' => 'car', 'Ca_17944_v3' => 'car', 'Ca_18546_v3' => 'car', 'Ca_24219_v3' => 'car', 'Ca_29972_v3' => 'car', 'CBR_g3681' => 'cbr', 'CBR_g40021' => 'cbr', 'Cc01_g08140' => 'ccan', 'Cc02_g13410' => 'ccan', 'Cc02_g37480' => 'ccan', 'Cc05_g12030' => 'ccan', 'Cc09_g03370' => 'ccan', 'Cc09_g10300' => 'ccan', 'Cc10_g03530' => 'ccan', 'Cc10_g11380' => 'ccan', 'CDE01G0176' => 'cde', 'CDE02G0675' => 'cde', 'CDE02G0942' => 'cde', 'CDE02G1153' => 'cde', 'CDE02G4177' => 'cde', 'CDE04G2117' => 'cde', 'CDE04G2736' => 'cde', 'CDE08G1161' => 'cde', 'CDE09G1238' => 'cde', 'Cfa000467' => 'cfa', 'Cfa000947' => 'cfa', 'Cfa004969' => 'cfa', 'Cfa005284' => 'cfa', 'Cfa008993' => 'cfa', 'Cfa018187' => 'cfa', 'Cfa018454' => 'cfa', 'Cfa020585' => 'cfa', 'Ciclev10000424m.g' => 'ccl', 'Ciclev10003605m.g' => 'ccl', 'Ciclev10007828m.g' => 'ccl', 'Ciclev10014620m.g' => 'ccl', 'Ciclev10015169m.g' => 'ccl', 'Ciclev10018291m.g' => 'ccl', 'Ciclev10028256m.g' => 'ccl', 'Ciclev10033822m.g' => 'ccl', 'CiPaw.05G060300' => 'cil', 'CiPaw.05G085000' => 'cil', 'CiPaw.06G083700' => 'cil', 'CiPaw.06G120300' => 'cil', 'CiPaw.09G060500' => 'cil', 'CiPaw.09G123800' => 'cil', 'CiPaw.11G169700' => 'cil', 'CiPaw.12G118300' => 'cil', 'CiPaw.15G071000' => 'cil', 'CiPaw.15G081900' => 'cil', 'ClCG01G024610' => 'cla', 'ClCG03G006070' => 'cla', 'ClCG05G019250' => 'cla', 'ClCG09G009500' => 'cla', 'ClCG11G008200' => 'cla', 'ClCG11G018080' => 'cla', 'COL.COLO4_17373' => 'col', 'COL.COLO4_22994' => 'col', 'COL.COLO4_26389' => 'col', 'COL.COLO4_27170' => 'col', 'COL.COLO4_31074' => 'col', 'COL.COLO4_31465' => 'col', 'COL.COLO4_36438' => 'col', 'COL.COLO4_36439' => 'col', 'Cpa.g.c38781' => 'cpa', 'Cpa.g.sc128.12' => 'cpa', 'Cpa.g.sc166.7' => 'cpa', 'Cpa.g.sc166.8' => 'cpa', 'Cpa.g.sc20.111' => 'cpa', 'Cpa.g.sc27.31' => 'cpa', 'Cpa.g.sc64.36' => 'cpa', 'Cpa.g.sc64.37' => 'cpa', 'Cpa.g.sc66.49' => 'cpa', 'Cpa.g.sc80.64' => 'cpa', 'CsaV3_1G012320' => 'csa', 'CsaV3_2G008480' => 'csa', 'CsaV3_2G033450' => 'csa', 'CsaV3_3G044830' => 'csa', 'CsaV3_4G033710' => 'csa', 'CsaV3_6G051730' => 'csa', 'CsaV3_7G025350' => 'csa', 'CSS0001067' => 'camsi', 'CSS0005996' => 'camsi', 'CSS0006590' => 'camsi', 'CSS0009673' => 'camsi', 'CSS0010201' => 'camsi', 'CSS0010549' => 'camsi', 'CSS0011364' => 'camsi', 'CSS0014473' => 'camsi', 'CSS0014961' => 'camsi', 'CSS0020191' => 'camsi', 'CSS0021165' => 'camsi', 'CSS0022306' => 'camsi', 'CSS0030591' => 'camsi', 'CSS0030696' => 'camsi', 'CSS0032653' => 'camsi', 'CSS0037487' => 'camsi', 'CSS0041102' => 'camsi', 'CSS0041261' => 'camsi', 'CSS0046246' => 'camsi', 'CSS0049256' => 'camsi', 'DCAR_004075' => 'dca', 'DCAR_011538' => 'dca', 'DCAR_019553' => 'dca', 'DCAR_020952' => 'dca', 'DCAR_021739' => 'dca', 'DCAR_027407' => 'dca', 'DCAR_027913' => 'dca', 'DCAR_028066' => 'dca', 'Dinv05899' => 'din', 'Dinv07563' => 'din', 'Dinv08010' => 'din', 'Dinv14125' => 'din', 'Dinv20172' => 'din', 'Dinv30743' => 'din', 'Dinv31229' => 'din', 'Dinv34162' => 'din', 'Dinv36028' => 'din', 'Dinv39368' => 'din', 'Dinv40565' => 'din', 'Dinv41706' => 'din', 'Duzib052G0089' => 'dzi', 'Duzib116G0641' => 'dzi', 'Duzib132G0069' => 'dzi', 'Duzib132G1219' => 'dzi', 'Duzib147G0278' => 'dzi', 'Duzib160G0480' => 'dzi', 'Duzib170G0661' => 'dzi', 'Duzib177G0591' => 'dzi', 'Duzib187G1353' => 'dzi', 'Duzib192G0858' => 'dzi', 'Duzib192G0883' => 'dzi', 'Duzib213G0506' => 'dzi', 'Duzib235G0289' => 'dzi', 'Duzib251G0422' => 'dzi', 'ECA232G3898' => 'eca', 'ECA233G5950' => 'eca', 'ECA234G1699' => 'eca', 'ECA234G2421' => 'eca', 'ECA236G0426' => 'eca', 'ECA236G4331' => 'eca', 'ECA248G2573' => 'eca', 'EL10Ac1g00077' => 'bvu', 'EL10Ac1g01746' => 'bvu', 'EL10Ac2g03464' => 'bvu', 'EL10Ac4g08176' => 'bvu', 'EL10Ac7g17521' => 'bvu', 'EL10Ac8g20386' => 'bvu', 'EL10Ac9g21343' => 'bvu', 'EL10Ac9g22688' => 'bvu', 'Eucgr.B03434' => 'egr', 'Eucgr.D00618' => 'egr', 'Eucgr.E02395' => 'egr', 'Eucgr.F01129' => 'egr', 'Eucgr.F02622' => 'egr', 'Eucgr.F04207' => 'egr', 'FAN01G0570' => 'fan', 'FAN03G3351' => 'fan', 'FAN06G3702' => 'fan', 'FAN07G2149' => 'fan', 'FAN10G3758' => 'fan', 'FAN11G1170' => 'fan', 'FAN11G2050' => 'fan', 'FAN11G2724' => 'fan', 'FAN12G1700' => 'fan', 'FAN12G2028' => 'fan', 'FAN15G1160' => 'fan', 'FAN15G3063' => 'fan', 'FAN16G2540' => 'fan', 'FAN16G3077' => 'fan', 'FAN16G3624' => 'fan', 'FAN17G0221' => 'fan', 'FAN20G2492' => 'fan', 'FAN20G2905' => 'fan', 'FAN21G0548' => 'fan', 'FAN21G1300' => 'fan', 'FAN22G0077' => 'fan', 'FAN22G1315' => 'fan', 'FAN24G1280' => 'fan', 'FAN24G1445' => 'fan', 'FAN24G3527' => 'fan', 'FAN25G0464' => 'fan', 'FAN25G2885' => 'fan', 'FAN25G3270' => 'fan', 'FAN27G1101' => 'fan', 'FAN27G2846' => 'fan', 'FAN27G3524' => 'fan', 'FvH4_2g11770' => 'fve', 'FvH4_2g15630' => 'fve', 'FvH4_3g05570' => 'fve', 'FvH4_3g09110' => 'fve', 'FvH4_3g19940' => 'fve', 'FvH4_4g04821' => 'fve', 'FvH4_4g31480' => 'fve', 'FvH4_7g01740' => 'fve', 'Glyma.05G130400' => 'gma', 'Glyma.05G156400' => 'gma', 'Glyma.07G197000' => 'gma', 'Glyma.08G085151' => 'gma', 'Glyma.08G114500' => 'gma', 'Glyma.08G300400' => 'gma', 'Glyma.10G215800' => 'gma', 'Glyma.12G224400' => 'gma', 'Glyma.13G179300' => 'gma', 'Glyma.13G218151' => 'gma', 'Glyma.13G238800' => 'gma', 'Glyma.13G276900' => 'gma', 'Glyma.14G078200' => 'gma', 'Glyma.15G074500' => 'gma', 'Glyma.15G094100' => 'gma', 'Glyma.17G247200' => 'gma', 'Glyma.18G120100' => 'gma', 'Glyma.20G176000' => 'gma', 'Gohir.A01G063600' => 'ghi', 'Gohir.A01G170301' => 'ghi', 'Gohir.A02G060500' => 'ghi', 'Gohir.A05G133850' => 'ghi', 'Gohir.A05G161400' => 'ghi', 'Gohir.A06G012900' => 'ghi', 'Gohir.A06G035901' => 'ghi', 'Gohir.A06G127100' => 'ghi', 'Gohir.A06G210500' => 'ghi', 'Gohir.A08G008650' => 'ghi', 'Gohir.A09G072700' => 'ghi', 'Gohir.A09G088301' => 'ghi', 'Gohir.A10G040600' => 'ghi', 'Gohir.A12G036300' => 'ghi', 'Gohir.A12G143350' => 'ghi', 'Gohir.A12G165500' => 'ghi', 'Gohir.A13G145700' => 'ghi', 'Gohir.D01G050000' => 'ghi', 'Gohir.D01G051366' => 'ghi', 'Gohir.D01G161350' => 'ghi', 'Gohir.D02G065900' => 'ghi', 'Gohir.D05G164200' => 'ghi', 'Gohir.D05G355500' => 'ghi', 'Gohir.D06G010400' => 'ghi', 'Gohir.D06G111250' => 'ghi', 'Gohir.D06G132000' => 'ghi', 'Gohir.D06G210500' => 'ghi', 'Gohir.D07G165675' => 'ghi', 'Gohir.D08G062240' => 'ghi', 'Gohir.D08G086101' => 'ghi', 'Gohir.D08G138060' => 'ghi', 'Gohir.D09G072300' => 'ghi', 'Gohir.D10G041400' => 'ghi', 'Gohir.D11G191020' => 'ghi', 'Gohir.D11G212066' => 'ghi', 'Gohir.D12G036300' => 'ghi', 'Gohir.D12G168600' => 'ghi', 'Gohir.D13G150600' => 'ghi', 'Gorai.001G057300' => 'gra', 'Gorai.002G069900' => 'gra', 'Gorai.002G200000' => 'gra', 'Gorai.003G067600' => 'gra', 'Gorai.005G074800' => 'gra', 'Gorai.006G087300' => 'gra', 'Gorai.008G037500' => 'gra', 'Gorai.008G181400' => 'gra', 'Gorai.009G169400' => 'gra', 'Gorai.009G387900' => 'gra', 'Gorai.010G013300' => 'gra', 'Gorai.010G153800' => 'gra', 'Gorai.010G255800' => 'gra', 'Gorai.011G043700' => 'gra', 'Gorai.011G198900' => 'gra', 'Gorai.013G168400' => 'gra', 'GSVIVG01005212001' => 'vvi', 'GSVIVG01006163001' => 'vvi', 'GSVIVG01009625001' => 'vvi', 'GSVIVG01014338001' => 'vvi', 'GSVIVG01020005001' => 'vvi', 'GSVIVG01021450001' => 'vvi', 'GSVIVG01023975001' => 'vvi', 'GSVIVG01034490001' => 'vvi', 'HanXRQChr04g0112071' => 'han', 'HanXRQChr05g0131151' => 'han', 'HanXRQChr09g0262371' => 'han', 'HanXRQChr09g0268401' => 'han', 'HanXRQChr10g0279241' => 'han', 'HanXRQChr10g0297961' => 'han', 'HanXRQChr11g0326231' => 'han', 'HanXRQChr11g0328471' => 'han', 'HanXRQChr16g0507941' => 'han', 'HanXRQChr17g0560211' => 'han', 'Haze_02108' => 'cav', 'Haze_02428' => 'cav', 'Haze_05593' => 'cav', 'Haze_06448' => 'cav', 'Haze_09427' => 'cav', 'Haze_12022' => 'cav', 'Haze_17612' => 'cav', 'Haze_17928' => 'cav', 'Hma1.2p1_0032F.1_g019250' => 'hma', 'Hma1.2p1_0163F.1_g072690' => 'hma', 'Hma1.2p1_0265F.1_g106710' => 'hma', 'Hma1.2p1_0286F.1_g113970' => 'hma', 'Hma1.2p1_0363F.1_g136640' => 'hma', 'Hma1.2p1_0584F.1_g183470' => 'hma', 'Hma1.2p1_0885F.1_g232570' => 'hma', 'HPP92_006022' => 'vpl', 'HPP92_007320' => 'vpl', 'HPP92_011521' => 'vpl', 'HPP92_019387' => 'vpl', 'HPP92_024038' => 'vpl', 'Hund05891' => 'sun', 'Hund06450' => 'sun', 'Hund12053' => 'sun', 'Hund16800' => 'sun', 'Hund21222' => 'sun', 'Hund22896' => 'sun', 'Hund23746' => 'sun', 'Hund27083' => 'sun', 'Lalb_Chr02g0141831' => 'lal', 'Lalb_Chr02g0141841' => 'lal', 'Lalb_Chr05g0220411' => 'lal', 'Lalb_Chr06g0162081' => 'lal', 'Lalb_Chr09g0327651' => 'lal', 'Lalb_Chr13g0295051' => 'lal', 'Lalb_Chr15g0086801' => 'lal', 'Lalb_Chr16g0383781' => 'lal', 'Lalb_Chr16g0383791' => 'lal', 'Lalb_Chr18g0055441' => 'lal', 'Lalb_Chr18g0059611' => 'lal', 'Lalb_Chr20g0109661' => 'lal', 'Lalb_Chr20g0109831' => 'lal', 'Lalb_Chr20g0121871' => 'lal', 'Lalb_Chr22g0355361' => 'lal', 'Lalb_Chr25g0286371' => 'lal', 'Lj1A1187G43' => 'lonja', 'Lj1A1205T50' => 'lonja', 'Lj1A800G33' => 'lonja', 'Lj1C1187T7' => 'lonja', 'Lj1C843T11' => 'lonja', 'Lj1g0010940' => 'lja', 'Lj2A288T69' => 'lonja', 'Lj3g0024276' => 'lja', 'Lj4A47T76' => 'lonja', 'Lj4g0005805' => 'lja', 'Lj4g0006097' => 'lja', 'Lj4g0008528' => 'lja', 'Lj4g0024907' => 'lja', 'Lj5g0012472' => 'lja', 'Lj5g0018648' => 'lja', 'Lj6C789G1' => 'lonja', 'Lj6g0004000' => 'lja', 'Lj7A292G67' => 'lonja', 'Lj7A292T64' => 'lonja', 'Lj9A400T58' => 'lonja', 'Lsat_1_v5_gn_1_126181' => 'lsa', 'Lsat_1_v5_gn_4_123041' => 'lsa', 'Lsat_1_v5_gn_4_133620' => 'lsa', 'Lsat_1_v5_gn_4_53221' => 'lsa', 'Lsat_1_v5_gn_4_71961' => 'lsa', 'Lsat_1_v5_gn_7_105241' => 'lsa', 'Lsat_1_v5_gn_7_21361' => 'lsa', 'Lsat_1_v5_gn_7_28860' => 'lsa', 'Lsat_1_v5_gn_7_31260' => 'lsa', 'Lsat_1_v5_gn_8_52801' => 'lsa', 'Manes.02G191400' => 'mes', 'Manes.03G110100' => 'mes', 'Manes.04G071100' => 'mes', 'Manes.05G100500' => 'mes', 'Manes.05G164700' => 'mes', 'Manes.15G087000' => 'mes', 'Manes.15G121500' => 'mes', 'Manes.16G028300' => 'mes', 'Manes.17G046100' => 'mes', 'Manes.17G069800' => 'mes', 'Manes.18G100500' => 'mes', 'Mapoly0002s0109' => 'mpo', 'Mapoly0024s0007' => 'mpo', 'Mapoly0089s0032' => 'mpo', 'MBI04_g42241_MAGBIO' => 'mbi', 'MBI05_g11988_MAGBIO' => 'mbi', 'MBI05_g35452_MAGBIO' => 'mbi', 'MBI07_g30179_MAGBIO' => 'mbi', 'MBI07_g35859_MAGBIO' => 'mbi', 'MBI07_g35860_MAGBIO' => 'mbi', 'MBI07_g37166_MAGBIO' => 'mbi', 'MBI08_g18172_MAGBIO' => 'mbi', 'MBI09_g08441_MAGBIO' => 'mbi', 'MBI13_g01676_MAGBIO' => 'mbi', 'MBI14_g42955_MAGBIO' => 'mbi', 'MBI16_g13161_MAGBIO' => 'mbi', 'MBI17_g27204_MAGBIO' => 'mbi', 'MBI19_g21595_MAGBIO' => 'mbi', 'MD00G1148400' => 'mdo', 'MD02G1301200' => 'mdo', 'MD03G1227800' => 'mdo', 'MD05G1041100' => 'mdo', 'MD05G1124800' => 'mdo', 'MD05G1284000' => 'mdo', 'MD05G1338800' => 'mdo', 'MD05G1338900' => 'mdo', 'MD07G1022800' => 'mdo', 'MD10G1047500' => 'mdo', 'MD10G1127500' => 'mdo', 'MD10G1262300' => 'mdo', 'MD10G1293800' => 'mdo', 'MD16G1074300' => 'mdo', 'Medtr1g021670' => 'mtr', 'Medtr1g096320' => 'mtr', 'Medtr2g013690' => 'mtr', 'Medtr2g019450' => 'mtr', 'Medtr2g085170' => 'mtr', 'Medtr4g088785' => 'mtr', 'Medtr8g055930' => 'mtr', 'Medtr8g085850' => 'mtr', 'MELO3C002605.2' => 'cme', 'MELO3C003891.2' => 'cme', 'MELO3C004012.2' => 'cme', 'MELO3C007134.2' => 'cme', 'MELO3C008118.2' => 'cme', 'MELO3C016700.2' => 'cme', 'MELO3C024127.2' => 'cme', 'MELO3C033361.2' => 'cme', 'MELO3C033362.2' => 'cme', 'Migut.C00430' => 'egut', 'Migut.C01246' => 'egut', 'Migut.E00101' => 'egut', 'Migut.H01486' => 'egut', 'Migut.H01939' => 'egut', 'Migut.K00360' => 'egut', 'Migut.M00910' => 'egut', 'Migut.M01139' => 'egut', 'Migut.N02677' => 'egut', 'MSTRG.13252' => 'ama', 'MSTRG.14701' => 'ama', 'MSTRG.1521' => 'ama', 'MSTRG.15884' => 'ama', 'MSTRG.16242' => 'ama', 'MSTRG.22285' => 'ama', 'MSTRG.22444' => 'ama', 'MSTRG.2349' => 'ama', 'MSTRG.26308' => 'ama', 'MSTRG.28296' => 'ama', 'MSTRG.9895' => 'ama', 'Nitab4.5_0000110g0060' => 'nta', 'Nitab4.5_0000420g0130' => 'nta', 'Nitab4.5_0000422g0030' => 'nta', 'Nitab4.5_0000560g0180' => 'nta', 'Nitab4.5_0000703g0100' => 'nta', 'Nitab4.5_0000786g0200' => 'nta', 'Nitab4.5_0001336g0020' => 'nta', 'Nitab4.5_0001796g0030' => 'nta', 'Nitab4.5_0003348g0060' => 'nta', 'Nitab4.5_0003698g0040' => 'nta', 'Nitab4.5_0003942g0090' => 'nta', 'Nitab4.5_0004775g0070' => 'nta', 'Nitab4.5_0004864g0030' => 'nta', 'Nitab4.5_0005615g0020' => 'nta', 'Nitab4.5_0009288g0030' => 'nta', 'Nitab4.5_0009341g0010' => 'nta', 'Nitab4.5_0009535g0010' => 'nta', 'Nn1g03995' => 'nnu', 'Nn1g04100' => 'nnu', 'Nn1g06530' => 'nnu', 'Nn3g16404' => 'nnu', 'Nn3g17212' => 'nnu', 'Nn3g20776' => 'nnu', 'Nn3g21923' => 'nnu', 'Nn5g27737' => 'nnu', 'Nn5g29461' => 'nnu', 'Nn7g38355' => 'nnu', 'Nn8g39873' => 'nnu', 'Oeu000548.2' => 'oeu', 'Oeu004672.1' => 'oeu', 'Oeu015605.2' => 'oeu', 'Oeu016092.1' => 'oeu', 'Oeu017879.3' => 'oeu', 'Oeu024910.1' => 'oeu', 'Oeu028965.1' => 'oeu', 'Oeu031269.1' => 'oeu', 'Oeu031270.1' => 'oeu', 'Oeu032535.1' => 'oeu', 'Oeu034151.1' => 'oeu', 'Oeu034152.1' => 'oeu', 'Oeu034588.2' => 'oeu', 'Oeu050846.1' => 'oeu', 'Oeu050849.2' => 'oeu', 'Oeu051063.2' => 'oeu', 'Oeu052368.1' => 'oeu', 'Oeu052370.1' => 'oeu', 'Os01g0210400' => 'osa', 'Os01g0304300' => 'osa', 'Os01g0749100' => 'osa', 'Os02g0745800' => 'osa', 'Os03g0769050' => 'osa', 'Os05g0531500' => 'osa', 'Os06g0724300' => 'osa', 'Os11g0198100' => 'osa', 'Peaxi162Scf00069g01425' => 'pax', 'Peaxi162Scf00280g00811' => 'pax', 'Peaxi162Scf00310g00615' => 'pax', 'Peaxi162Scf00362g00542' => 'pax', 'Peaxi162Scf00461g00310' => 'pax', 'Peaxi162Scf00530g00118' => 'pax', 'Peaxi162Scf00541g00057' => 'pax', 'Peaxi162Scf00661g00017' => 'pax', 'Peaxi162Scf00926g00027' => 'pax', 'Peaxi162Scf01064g00263' => 'pax', 'Peaxi162Scf01211g00135' => 'pax', 'PGR004G2336' => 'pgr', 'PGR042G0327' => 'pgr', 'PGR042G1957' => 'pgr', 'PGR042G2003' => 'pgr', 'PGR042G3929' => 'pgr', 'PGR083G1137' => 'pgr', 'PGR083G1364' => 'pgr', 'PGSC0003DMG400003381' => 'stu', 'PGSC0003DMG400003417' => 'stu', 'PGSC0003DMG400008981' => 'stu', 'PGSC0003DMG400012417' => 'stu', 'PGSC0003DMG400012823' => 'stu', 'PGSC0003DMG400016885' => 'stu', 'PGSC0003DMG400022812' => 'stu', 'PGSC0003DMG400029726' => 'stu', 'PGSC0003DMG401009243' => 'stu', 'PGSC0003DMG401031505' => 'stu', 'PGSC0003DMG402031505' => 'stu', 'Phvul.001G017600' => 'pvu', 'Phvul.002G193500' => 'pvu', 'Phvul.002G228900' => 'pvu', 'Phvul.002G236800' => 'pvu', 'Phvul.003G049500' => 'pvu', 'Phvul.005G072000' => 'pvu', 'Phvul.006G164800' => 'pvu', 'Phvul.006G185100' => 'pvu', 'Phvul.007G090000' => 'pvu', 'Potri.001G399800' => 'ptr', 'Potri.002G149900' => 'ptr', 'Potri.004G044100' => 'ptr', 'Potri.004G177600' => 'ptr', 'Potri.009G138000' => 'ptr', 'Potri.010G094000' => 'ptr', 'Potri.011G053000' => 'ptr', 'Potri.011G119300' => 'ptr', 'Potri.013G113700' => 'ptr', 'Potri.018G107800' => 'ptr', 'Potri.019G084100' => 'ptr', 'Pp3c14_23720' => 'ppa', 'Pp3c16_6340' => 'ppa', 'Pp3c23_13420' => 'ppa', 'Pp3c24_2740' => 'ppa', 'Pp3c25_860' => 'ppa', 'Pp3c8_21750' => 'ppa', 'Prupe.1G273000' => 'ppe', 'Prupe.1G273700' => 'ppe', 'Prupe.1G274100' => 'ppe', 'Prupe.2G023300' => 'ppe', 'Prupe.4G048000' => 'ppe', 'Prupe.4G080400' => 'ppe', 'Prupe.4G181200' => 'ppe', 'Prupe.8G056900' => 'ppe', 'Prupe.8G168700' => 'ppe', 'Psat1g189080' => 'psa', 'Psat1g204760' => 'psa', 'Psat4g175560' => 'psa', 'Psat4g177720' => 'psa', 'Psat5g244240' => 'psa', 'Psat6g010720' => 'psa', 'Psat6g187200' => 'psa', 'Psat7g072040' => 'psa', 'PSO017G3501' => 'pso', 'PSO063G2148' => 'pso', 'PSO063G5608' => 'pso', 'PSO210G6392' => 'pso', 'PSO541G2319' => 'pso', 'PSO541G2836' => 'pso', 'PSO541G4012' => 'pso', 'PSO541G6253' => 'pso', 'PSO675G0580' => 'pso', 'PSO675G0856' => 'pso', 'PSO675G5635' => 'pso', 'PSO675G9157' => 'pso', 'PSO832G1660' => 'pso', 'PSO832G1969' => 'pso', 'QL02p007186' => 'qlo', 'QL02p033904' => 'qlo', 'QL03p064391' => 'qlo', 'QL05p040593' => 'qlo', 'QL05p058242' => 'qlo', 'QL08p021825' => 'qlo', 'QL11p004981' => 'qlo', 'RcHm_v2.0_Chr1g0318301' => 'rch', 'RcHm_v2.0_Chr4g0418501' => 'rch', 'RcHm_v2.0_Chr4g0439971' => 'rch', 'RcHm_v2.0_Chr5g0008541' => 'rch', 'RcHm_v2.0_Chr5g0014101' => 'rch', 'RcHm_v2.0_Chr5g0014131' => 'rch', 'RcHm_v2.0_Chr5g0033621' => 'rch', 'RcHm_v2.0_Chr6g0272041' => 'rch', 'RcHm_v2.0_Chr6g0278831' => 'rch', 'Rhsim02G0130400' => 'rsi', 'Rhsim02G0171100' => 'rsi', 'Rhsim05G0053000' => 'rsi', 'Rhsim05G0053100' => 'rsi', 'Rhsim06G0096500' => 'rsi', 'Rhsim06G0096600' => 'rsi', 'Rhsim06G0199100' => 'rsi', 'Rhsim12G0062300' => 'rsi', 'Rhsim12G0062800' => 'rsi', 'Sabra02G0118600' => 'sbr', 'Sabra04G0027300' => 'sbr', 'Sabra04G0119500' => 'sbr', 'Sabra08G0112500' => 'sbr', 'Sabra11G0036800' => 'sbr', 'Sabra11G0103800' => 'sbr', 'Sabra13G0096300' => 'sbr', 'Sabra16G0262300' => 'sbr', 'Sabra18G0091700' => 'sbr', 'Sabra19G0095400' => 'sbr', 'SalBow6G3080' => 'sbo', 'SalBow7G1157' => 'sbo', 'SalBow7G2123' => 'sbo', 'SalBow7G2285' => 'sbo', 'SalBow7G3537' => 'sbo', 'SalBow8G2947' => 'sbo', 'SalBow8G4463' => 'sbo', 'SalBow8G5466' => 'sbo', 'Sc01g0001750' => 'sci', 'Sc02g0006640' => 'sci', 'Sc02g0006670' => 'sci', 'Sc04g0008220' => 'sci', 'Sc05g0006190' => 'sci', 'Sc08g0002760' => 'sci', 'Sc17g0006170' => 'sci', 'Sc22g0002050' => 'sci', 'Sc23g0001190' => 'sci', 'Sc24g0000980' => 'sci', 'Sed0006245' => 'sed', 'Sed0007543' => 'sed', 'Sed0009411' => 'sed', 'Sed0010765' => 'sed', 'Sed0012944' => 'sed', 'Sed0014682' => 'sed', 'Sed0016174' => 'sed', 'Sed0016796' => 'sed', 'Sed0020317' => 'sed', 'Sed0021467' => 'sed', 'SEGI_01316' => 'sgi', 'SEGI_03374' => 'sgi', 'SEGI_16265' => 'sgi', 'SEGI_18569' => 'sgi', 'SEGI_20351' => 'sgi', 'SEGI_26395' => 'sgi', 'SEGI_29469' => 'sgi', 'SEGI_34771' => 'sgi', 'SEGI_36769' => 'sgi', 'SEGI_37139' => 'sgi', 'SGA_v2.0_scaffold100G29687' => 'sas', 'SGA_v2.0_scaffold118G32472' => 'sas', 'SGA_v2.0_scaffold14G07051' => 'sas', 'SGA_v2.0_scaffold183G39845' => 'sas', 'SGA_v2.0_scaffold1G00174' => 'sas', 'SGA_v2.0_scaffold22G09714' => 'sas', 'SGA_v2.0_scaffold333G48992' => 'sas', 'SGA_v2.0_scaffold46G17491' => 'sas', 'SGA_v2.0_scaffold49G18294' => 'sas', 'SGA_v2.0_scaffold63G21658' => 'sas', 'SHI01741' => 'shi', 'SHI05771' => 'shi', 'SHI18077' => 'shi', 'SHI20525' => 'shi', 'SHI20527' => 'shi', 'SHI20528' => 'shi', 'SMO172G0185' => 'smo', 'SMO198G0020' => 'smo', 'SMO351G0006' => 'smo', 'SMO356G0118' => 'smo', 'SMO358G0296' => 'smo', 'SMO367G0079' => 'smo', 'SMO367G1277' => 'smo', 'Solyc01g014220.3' => 'sly', 'Solyc01g111770.2' => 'sly', 'Solyc02g078180.3' => 'sly', 'Solyc03g006430.3' => 'sly', 'Solyc03g006456.1' => 'sly', 'Solyc03g079860.2' => 'sly', 'Solyc04g079770.3' => 'sly', 'Solyc05g007430.4' => 'sly', 'Solyc07g063150.3' => 'sly', 'Solyc08g016620.3' => 'sly', 'Solyc09g057590.3' => 'sly', 'Solyc09g057600.1' => 'sly', 'Solyc10g009050.3' => 'sly', 'Solyc11g017420.2' => 'sly', 'Sopen01g053810' => 'spe', 'Sopen02g023040' => 'spe', 'Sopen03g002440' => 'spe', 'Sopen04g033350' => 'spe', 'Sopen05g003310' => 'spe', 'Sopen07g004050' => 'spe', 'Sopen07g031340' => 'spe', 'Sopen08g006990' => 'spe', 'Sopen10g004830' => 'spe', 'Sopen11g009370' => 'spe', 'Sp1g24450' => 'spa', 'Sp1g29670' => 'spa', 'Sp1g39600' => 'spa', 'Sp2g11080' => 'spa', 'Sp2g13970' => 'spa', 'Sp4g16130' => 'spa', 'Sp6g13080' => 'spa', 'Sp7g37270' => 'spa', 'TAR371G0065' => 'tar', 'TAR376G0340' => 'tar', 'TAR376G0435' => 'tar', 'TAR381G0002' => 'tar', 'TAR381G1236' => 'tar', 'TAR624G0055' => 'tar', 'TAR624G0324' => 'tar', 'TAR624G0696' => 'tar', 'TAR624G0906' => 'tar', 'TAR625G0107' => 'tar', 'TAR626G0015' => 'tar', 'TAR626G1356' => 'tar', 'TAR627G0888' => 'tar', 'TAR628G0399' => 'tar', 'TAR628G1327' => 'tar', 'TAR629G2831' => 'tar', 'TAR629G2874' => 'tar', 'TAR633G1432' => 'tar', 'TAR633G2771' => 'tar', 'THA.LOC104803394' => 'tha', 'THA.LOC104805153' => 'tha', 'THA.LOC104806784' => 'tha', 'THA.LOC104810473' => 'tha', 'THA.LOC104813100' => 'tha', 'THA.LOC104814215' => 'tha', 'THA.LOC104815554' => 'tha', 'THA.LOC104820544' => 'tha', 'THA.LOC104824754' => 'tha', 'THA.LOC104827717' => 'tha', 'Thecc.02G031400' => 'tca', 'Thecc.02G055900' => 'tca', 'Thecc.02G350800' => 'tca', 'Thecc.06G150900' => 'tca', 'Thecc.06G186600' => 'tca', 'Thecc.07G089600' => 'tca', 'Thecc.08G020400' => 'tca', 'Thecc.08G182100' => 'tca', 'Thhalv10000873m.g' => 'esa', 'Thhalv10004185m.g' => 'esa', 'Thhalv10006981m.g' => 'esa', 'Thhalv10007204m.g' => 'esa', 'Thhalv10011374m.g' => 'esa', 'Thhalv10013482m.g' => 'esa', 'Thhalv10017801m.g' => 'esa', 'Thhalv10024983m.g' => 'esa', 'TPR.G12072' => 'tpr', 'TPR.G15769' => 'tpr', 'TPR.G16504' => 'tpr', 'TPR.G16506' => 'tpr', 'TPR.G24345' => 'tpr', 'TPR.G26666' => 'tpr', 'TPR.G27320' => 'tpr', 'TPR.G31819' => 'tpr', 'TPR.G38879' => 'tpr', 'TPR.G39015' => 'tpr', 'TPR.G8819' => 'tpr', 'TWI09G0924' => 'twi', 'TWI12G0811' => 'twi', 'TWI12G1294' => 'twi', 'TWI31G0150' => 'twi', 'TWI36G1262' => 'twi', 'TWI38G1287' => 'twi', 'TWI38G1633' => 'twi', 'TWI38G1982' => 'twi', 'TWI39G0116' => 'twi', 'TWI60G1011' => 'twi', 'TWI63G0171' => 'twi', 'TWI73G0839' => 'twi', 'TWI79G1511' => 'twi', 'unitig_0.g915' => 'ugi', 'unitig_0.g916' => 'ugi', 'unitig_21.g20219' => 'ugi', 'unitig_21.g20416' => 'ugi', 'unitig_578.g16132' => 'ugi', 'unitig_578.g16718' => 'ugi', 'unitig_62.g23481' => 'ugi', 'unitig_744.g24535' => 'ugi', 'unitig_749.g13525' => 'ugi', 'vmacro01248' => 'vma', 'vmacro02290' => 'vma', 'vmacro10946' => 'vma', 'vmacro11865' => 'vma', 'vmacro12493' => 'vma', 'vmacro17322' => 'vma', 'vmacro21599' => 'vma', 'vmacro23041' => 'vma', 'VMungo0251G0004' => 'vmu', 'VMungo0251G2639' => 'vmu', 'VMungo0251G2967' => 'vmu', 'VMungo0540G0864' => 'vmu', 'VMungo0540G1569' => 'vmu', 'VMungo0647G0317' => 'vmu', 'VMungo0720G1373' => 'vmu', 'VMungo0720G1508' => 'vmu', 'VMungo1080G0485' => 'vmu', 'VMungo1215G3177' => 'vmu', 'Zm00001eb112600' => 'zma', 'Zm00001eb120220' => 'zma', 'Zm00001eb153240' => 'zma', 'Zm00001eb168880' => 'zma', 'Zm00001eb213920' => 'zma', 'Zm00001eb228280' => 'zma', 'Zm00001eb254580' => 'zma', 'Zm00001eb272180' => 'zma', 'Zm00001eb293190' => 'zma', 'Zm00001eb322930' => 'zma', 'Zm00001eb353360' => 'zma', 'Zm00001eb353390' => 'zma', 'Zm00001eb353430' => 'zma', 'Zm00001eb353440' => 'zma', 'Zm00001eb353780' => 'zma' ) $gf_id = 'HOM05D000499' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000499' ) $data_identifier = 'HOM05D000499' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 29, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 12, 'amhyb' => (int) 8, 'aly' => (int) 12, 'aox' => (int) 9, 'arhy' => (int) 26, 'ath' => (int) 8, 'atr' => (int) 7, 'acertr' => (int) 10, 'cqu' => (int) 15, 'bca' => (int) 29, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 11, 'cansat' => (int) 8, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 9, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 8, 'cpa' => (int) 10, 'csa' => (int) 7, 'camsi' => (int) 20, 'dca' => (int) 8, 'din' => (int) 12, 'dzi' => (int) 14, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 6, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 38, 'gra' => (int) 16, 'vvi' => (int) 8, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 5, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 11, 'lja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 11, 'mpo' => (int) 3, 'mbi' => (int) 14, 'mdo' => (int) 14, 'mtr' => (int) 8, 'cme' => (int) 9, 'egut' => (int) 9, 'ama' => (int) 11, 'nta' => (int) 17, 'nnu' => (int) 11, 'oeu' => (int) 18, 'osa' => (int) 8, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 6, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 9, 'rsi' => (int) 9, 'sbr' => (int) 10, 'sbo' => (int) 8, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 10, 'sas' => (int) 10, 'shi' => (int) 6, 'smo' => (int) 7, 'sly' => (int) 14, 'spe' => (int) 10, 'spa' => (int) 8, 'tar' => (int) 19, 'tha' => (int) 10, 'tca' => (int) 8, 'esa' => (int) 8, 'tpr' => (int) 11, 'twi' => (int) 13, 'ugi' => (int) 9, 'vma' => (int) 8, 'vmu' => (int) 10, 'zma' => (int) 15 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb353780' $species_info = array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ) $local_species = 'ghi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000499', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1066', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p29780' => 'bna', 'A02p33180' => 'bna', 'A03p16470' => 'bna', 'A03p66010' => 'bna', 'A04p25970' => 'bna', 'A06p01270' => 'bna', 'A06p46080' => 'bna', 'A07p11400' => 'bna', 'A08p01840' => 'bna', 'A08p08230' => 'bna', 'A08p25740' => 'bna', 'A09p32070' => 'bna', 'A09p37830' => 'bna', 'A09p42840' => 'bna', 'A09p42850' => 'bna', 'Aa31LG10G2060' => 'aar', 'Aa31LG2G7410' => 'aar', 'Aa31LG6G10200' => 'aar', 'Aa31LG6G16680' => 'aar', 'Aa31LG6G8470' => 'aar', 'Aa31LG9G12730' => 'aar', 'Aa31LG9G13680' => 'aar', 'Aa31LG9G14920' => 'aar', 'Aa31LG9G6650' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4977' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5467' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3254' => 'aag', 'Actinidia02578' => 'ach', 'Actinidia07693' => 'ach', 'Actinidia08413' => 'ach', 'Actinidia08414' => 'ach', 'Actinidia15289' => 'ach', 'Actinidia19871' => 'ach', 'Actinidia21475' => 'ach', 'Actinidia22576' => 'ach', 'Actinidia28327' => 'ach', 'Actinidia32491' => 'ach', 'Actinidia39463' => 'ach', 'Actinidia39571' => 'ach', 'Ah.01g013750' => 'amhyb', 'Ah.01g023210' => 'amhyb', 'Ah.04g164850' => 'amhyb', 'Ah.05g178060' => 'amhyb', 'Ah.07g204270' => 'amhyb', 'Ah.07g208480' => 'amhyb', 'Ah.09g237410' => 'amhyb', 'Ah.14g089460' => 'amhyb', 'AL1G41790' => 'aly', 'AL1G49050' => 'aly', 'AL1G53810' => 'aly', 'AL1G61400' => 'aly', 'AL4G18580' => 'aly', 'AL5G12510' => 'aly', 'AL5G12540' => 'aly', 'AL6G43230' => 'aly', 'AL7G10370' => 'aly', 'AL7G19250' => 'aly', 'AL8G12240' => 'aly', 'AL8G18540' => 'aly', 'Aqoxy1G02409' => 'aox', 'Aqoxy2G03993' => 'aox', 'Aqoxy3G03357' => 'aox', 'Aqoxy4G00785' => 'aox', 'Aqoxy5G02598' => 'aox', 'Aqoxy6G00132' => 'aox', 'Aqoxy7G01776' => 'aox', 'Aqoxy7G02316' => 'aox', 'Aqoxy7G03973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.12AFKW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B8730' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27IQR1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3F75VG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3RE0GA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41TCQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.527VTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FIR39' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5W8UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DA38EV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ63HS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H1I32C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HC27T5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4M8AP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7N3CZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9UVDZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LS1NQA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT1D4B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SKC4TM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCFV76' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF9Q1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQWD9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1ZM88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WE07RT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YCK7VH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJE6Q6' => 'arhy', 'AT1G28240' => 'ath', 'AT1G34550' => 'ath', 'AT1G53040' => 'ath', 'AT2G02910' => 'ath', 'AT4G09630' => 'ath', 'AT4G38500' => 'ath', 'AT5G42660' => 'ath', 'AT5G46220' => 'ath', 'ATR0152G026' => 'atr', 'ATR0564G343' => 'atr', 'ATR0706G151' => 'atr', 'ATR0733G207' => 'atr', 'ATR0751G234' => 'atr', 'ATR0807G048' => 'atr', 'ATR1091G084' => 'atr', 'Atru.chr10.1229' => 'acertr', 'Atru.chr10.1230' => 'acertr', 'Atru.chr10.1874' => 'acertr', 'Atru.chr11.1808' => 'acertr', 'Atru.chr13.1795' => 'acertr', 'Atru.chr13.570' => 'acertr', 'Atru.chr2.2608' => 'acertr', 'Atru.chr2.2609' => 'acertr', 'Atru.chr5.3428' => 'acertr', 'Atru.chr8.1171' => 'acertr', 'AUR62004651' => 'cqu', 'AUR62008675' => 'cqu', 'AUR62010014' => 'cqu', 'AUR62013004' => 'cqu', 'AUR62014825' => 'cqu', 'AUR62015015' => 'cqu', 'AUR62015151' => 'cqu', 'AUR62017020' => 'cqu', 'AUR62019422' => 'cqu', 'AUR62023570' => 'cqu', 'AUR62025571' => 'cqu', 'AUR62029098' => 'cqu', 'AUR62033863' => 'cqu', 'AUR62034296' => 'cqu', 'AUR62040075' => 'cqu', 'BcaB02g07334' => 'bca', 'BcaB02g10575' => 'bca', 'BcaB03g12119' => 'bca', 'BcaB03g12120' => 'bca', 'BcaB03g13945' => 'bca', 'BcaB04g17123' => 'bca', 'BcaB04g17867' => 'bca', 'BcaB04g19839' => 'bca', 'BcaB07g30317' => 'bca', 'BcaB07g32432' => 'bca', 'BcaB07g33362' => 'bca', 'BcaB08g36611' => 'bca', 'BcaC01g00028' => 'bca', 'BcaC01g01356' => 'bca', 'BcaC01g02034' => 'bca', 'BcaC01g06051' => 'bca', 'BcaC03g16839' => 'bca', 'BcaC03g17176' => 'bca', 'BcaC05g26829' => 'bca', 'BcaC06g31490' => 'bca', 'BcaC06g35344' => 'bca', 'BcaC06g36570' => 'bca', 'BcaC07g37537' => 'bca', 'BcaC08g43491' => 'bca', 'BcaC08g43773' => 'bca', 'BcaNung00234' => 'bca', 'BcaNung01982' => 'bca', 'BcaNung03707' => 'bca', 'BcaNung06454' => 'bca', 'BolC2t10762H' => 'bol', 'BolC2t11191H' => 'bol', 'BolC3t14322H' => 'bol', 'BolC3t19747H' => 'bol', 'BolC3t21425H' => 'bol', 'BolC4t27800H' => 'bol', 'BolC5t31423H' => 'bol', 'BolC6t35951H' => 'bol', 'BolC6t36282H' => 'bol', 'BolC7t40678H' => 'bol', 'BolC7t40679H' => 'bol', 'BolC7t42222H' => 'bol', 'BolC7t43492H' => 'bol', 'BolC7t46785H' => 'bol', 'BolC8t47853H' => 'bol', 'BolC9t56805H' => 'bol', 'BraA02t08000Z' => 'bra', 'BraA02t08341Z' => 'bra', 'BraA03t10936Z' => 'bra', 'BraA03t15657Z' => 'bra', 'BraA04t18100Z' => 'bra', 'BraA05t20523Z' => 'bra', 'BraA06t23353Z' => 'bra', 'BraA06t27473Z' => 'bra', 'BraA06t27769Z' => 'bra', 'BraA07t28928Z' => 'bra', 'BraA08t32236Z' => 'bra', 'BraA08t32841Z' => 'bra', 'BraA08t34524Z' => 'bra', 'BraA09t38742Z' => 'bra', 'BraA09t39295Z' => 'bra', 'C02p47180' => 'bna', 'C02p50990' => 'bna', 'C03p19360' => 'bna', 'C03p74950' => 'bna', 'C03p91000' => 'bna', 'C04p63260' => 'bna', 'C05p27050' => 'bna', 'C06p08750' => 'bna', 'C06p11490' => 'bna', 'C07p02820' => 'bna', 'C07p17180' => 'bna', 'C07p29440' => 'bna', 'C07p63730' => 'bna', 'C09p39260' => 'bna', 'CAN.G1164.34' => 'can', 'CAN.G1164.39' => 'can', 'CAN.G1530.3' => 'can', 'CAN.G162.61' => 'can', 'CAN.G176.6' => 'can', 'CAN.G289.49' => 'can', 'CAN.G370.21' => 'can', 'CAN.G370.22' => 'can', 'CAN.G371.117' => 'can', 'CAN.G58.37' => 'can', 'CAN.G588.98' => 'can', 'CANSAT21G2266' => 'cansat', 'CANSAT25G2799' => 'cansat', 'CANSAT35G0862' => 'cansat', 'CANSAT35G1704' => 'cansat', 'CANSAT35G1760' => 'cansat', 'CANSAT56G3971' => 'cansat', 'CANSAT56G4116' => 'cansat', 'CANSAT80G1259' => 'cansat', 'CARHR027730' => 'chi', 'CARHR033880' => 'chi', 'CARHR043270' => 'chi', 'CARHR145330' => 'chi', 'CARHR145340' => 'chi', 'CARHR175570' => 'chi', 'CARHR181570' => 'chi', 'CARHR258470' => 'chi', 'CARHR260490' => 'chi', 'CARHR294220' => 'chi', 'Carub.0001s2668' => 'cru', 'Carub.0001s3257' => 'cru', 'Carub.0001s4220' => 'cru', 'Carub.0005s0179' => 'cru', 'Carub.0006s2807' => 'cru', 'Carub.0007s0039' => 'cru', 'Carub.0008s0169' => 'cru', 'Carub.0008s0636' => 'cru', 'Ca_00338_v3' => 'car', 'Ca_00542_v3' => 'car', 'Ca_01844_v3' => 'car', 'Ca_10611_v3' => 'car', 'Ca_13326_v3' => 'car', 'Ca_17944_v3' => 'car', 'Ca_18546_v3' => 'car', 'Ca_24219_v3' => 'car', 'Ca_29972_v3' => 'car', 'CBR_g3681' => 'cbr', 'CBR_g40021' => 'cbr', 'Cc01_g08140' => 'ccan', 'Cc02_g13410' => 'ccan', 'Cc02_g37480' => 'ccan', 'Cc05_g12030' => 'ccan', 'Cc09_g03370' => 'ccan', 'Cc09_g10300' => 'ccan', 'Cc10_g03530' => 'ccan', 'Cc10_g11380' => 'ccan', 'CDE01G0176' => 'cde', 'CDE02G0675' => 'cde', 'CDE02G0942' => 'cde', 'CDE02G1153' => 'cde', 'CDE02G4177' => 'cde', 'CDE04G2117' => 'cde', 'CDE04G2736' => 'cde', 'CDE08G1161' => 'cde', 'CDE09G1238' => 'cde', 'Cfa000467' => 'cfa', 'Cfa000947' => 'cfa', 'Cfa004969' => 'cfa', 'Cfa005284' => 'cfa', 'Cfa008993' => 'cfa', 'Cfa018187' => 'cfa', 'Cfa018454' => 'cfa', 'Cfa020585' => 'cfa', 'Ciclev10000424m.g' => 'ccl', 'Ciclev10003605m.g' => 'ccl', 'Ciclev10007828m.g' => 'ccl', 'Ciclev10014620m.g' => 'ccl', 'Ciclev10015169m.g' => 'ccl', 'Ciclev10018291m.g' => 'ccl', 'Ciclev10028256m.g' => 'ccl', 'Ciclev10033822m.g' => 'ccl', 'CiPaw.05G060300' => 'cil', 'CiPaw.05G085000' => 'cil', 'CiPaw.06G083700' => 'cil', 'CiPaw.06G120300' => 'cil', 'CiPaw.09G060500' => 'cil', 'CiPaw.09G123800' => 'cil', 'CiPaw.11G169700' => 'cil', 'CiPaw.12G118300' => 'cil', 'CiPaw.15G071000' => 'cil', 'CiPaw.15G081900' => 'cil', 'ClCG01G024610' => 'cla', 'ClCG03G006070' => 'cla', 'ClCG05G019250' => 'cla', 'ClCG09G009500' => 'cla', 'ClCG11G008200' => 'cla', 'ClCG11G018080' => 'cla', 'COL.COLO4_17373' => 'col', 'COL.COLO4_22994' => 'col', 'COL.COLO4_26389' => 'col', 'COL.COLO4_27170' => 'col', 'COL.COLO4_31074' => 'col', 'COL.COLO4_31465' => 'col', 'COL.COLO4_36438' => 'col', 'COL.COLO4_36439' => 'col', 'Cpa.g.c38781' => 'cpa', 'Cpa.g.sc128.12' => 'cpa', 'Cpa.g.sc166.7' => 'cpa', 'Cpa.g.sc166.8' => 'cpa', 'Cpa.g.sc20.111' => 'cpa', 'Cpa.g.sc27.31' => 'cpa', 'Cpa.g.sc64.36' => 'cpa', 'Cpa.g.sc64.37' => 'cpa', 'Cpa.g.sc66.49' => 'cpa', 'Cpa.g.sc80.64' => 'cpa', 'CsaV3_1G012320' => 'csa', 'CsaV3_2G008480' => 'csa', 'CsaV3_2G033450' => 'csa', 'CsaV3_3G044830' => 'csa', 'CsaV3_4G033710' => 'csa', 'CsaV3_6G051730' => 'csa', 'CsaV3_7G025350' => 'csa', 'CSS0001067' => 'camsi', 'CSS0005996' => 'camsi', 'CSS0006590' => 'camsi', 'CSS0009673' => 'camsi', 'CSS0010201' => 'camsi', 'CSS0010549' => 'camsi', 'CSS0011364' => 'camsi', 'CSS0014473' => 'camsi', 'CSS0014961' => 'camsi', 'CSS0020191' => 'camsi', 'CSS0021165' => 'camsi', 'CSS0022306' => 'camsi', 'CSS0030591' => 'camsi', 'CSS0030696' => 'camsi', 'CSS0032653' => 'camsi', 'CSS0037487' => 'camsi', 'CSS0041102' => 'camsi', 'CSS0041261' => 'camsi', 'CSS0046246' => 'camsi', 'CSS0049256' => 'camsi', 'DCAR_004075' => 'dca', 'DCAR_011538' => 'dca', 'DCAR_019553' => 'dca', 'DCAR_020952' => 'dca', 'DCAR_021739' => 'dca', 'DCAR_027407' => 'dca', 'DCAR_027913' => 'dca', 'DCAR_028066' => 'dca', 'Dinv05899' => 'din', 'Dinv07563' => 'din', 'Dinv08010' => 'din', 'Dinv14125' => 'din', 'Dinv20172' => 'din', 'Dinv30743' => 'din', 'Dinv31229' => 'din', 'Dinv34162' => 'din', 'Dinv36028' => 'din', 'Dinv39368' => 'din', 'Dinv40565' => 'din', 'Dinv41706' => 'din', 'Duzib052G0089' => 'dzi', 'Duzib116G0641' => 'dzi', 'Duzib132G0069' => 'dzi', 'Duzib132G1219' => 'dzi', 'Duzib147G0278' => 'dzi', 'Duzib160G0480' => 'dzi', 'Duzib170G0661' => 'dzi', 'Duzib177G0591' => 'dzi', 'Duzib187G1353' => 'dzi', 'Duzib192G0858' => 'dzi', 'Duzib192G0883' => 'dzi', 'Duzib213G0506' => 'dzi', 'Duzib235G0289' => 'dzi', 'Duzib251G0422' => 'dzi', 'ECA232G3898' => 'eca', 'ECA233G5950' => 'eca', 'ECA234G1699' => 'eca', 'ECA234G2421' => 'eca', 'ECA236G0426' => 'eca', 'ECA236G4331' => 'eca', 'ECA248G2573' => 'eca', 'EL10Ac1g00077' => 'bvu', 'EL10Ac1g01746' => 'bvu', 'EL10Ac2g03464' => 'bvu', 'EL10Ac4g08176' => 'bvu', 'EL10Ac7g17521' => 'bvu', 'EL10Ac8g20386' => 'bvu', 'EL10Ac9g21343' => 'bvu', 'EL10Ac9g22688' => 'bvu', 'Eucgr.B03434' => 'egr', 'Eucgr.D00618' => 'egr', 'Eucgr.E02395' => 'egr', 'Eucgr.F01129' => 'egr', 'Eucgr.F02622' => 'egr', 'Eucgr.F04207' => 'egr', 'FAN01G0570' => 'fan', 'FAN03G3351' => 'fan', 'FAN06G3702' => 'fan', 'FAN07G2149' => 'fan', 'FAN10G3758' => 'fan', 'FAN11G1170' => 'fan', 'FAN11G2050' => 'fan', 'FAN11G2724' => 'fan', 'FAN12G1700' => 'fan', 'FAN12G2028' => 'fan', 'FAN15G1160' => 'fan', 'FAN15G3063' => 'fan', 'FAN16G2540' => 'fan', 'FAN16G3077' => 'fan', 'FAN16G3624' => 'fan', 'FAN17G0221' => 'fan', 'FAN20G2492' => 'fan', 'FAN20G2905' => 'fan', 'FAN21G0548' => 'fan', 'FAN21G1300' => 'fan', 'FAN22G0077' => 'fan', 'FAN22G1315' => 'fan', 'FAN24G1280' => 'fan', 'FAN24G1445' => 'fan', 'FAN24G3527' => 'fan', 'FAN25G0464' => 'fan', 'FAN25G2885' => 'fan', 'FAN25G3270' => 'fan', 'FAN27G1101' => 'fan', 'FAN27G2846' => 'fan', 'FAN27G3524' => 'fan', 'FvH4_2g11770' => 'fve', 'FvH4_2g15630' => 'fve', 'FvH4_3g05570' => 'fve', 'FvH4_3g09110' => 'fve', 'FvH4_3g19940' => 'fve', 'FvH4_4g04821' => 'fve', 'FvH4_4g31480' => 'fve', 'FvH4_7g01740' => 'fve', 'Glyma.05G130400' => 'gma', 'Glyma.05G156400' => 'gma', 'Glyma.07G197000' => 'gma', 'Glyma.08G085151' => 'gma', 'Glyma.08G114500' => 'gma', 'Glyma.08G300400' => 'gma', 'Glyma.10G215800' => 'gma', 'Glyma.12G224400' => 'gma', 'Glyma.13G179300' => 'gma', 'Glyma.13G218151' => 'gma', 'Glyma.13G238800' => 'gma', 'Glyma.13G276900' => 'gma', 'Glyma.14G078200' => 'gma', 'Glyma.15G074500' => 'gma', 'Glyma.15G094100' => 'gma', 'Glyma.17G247200' => 'gma', 'Glyma.18G120100' => 'gma', 'Glyma.20G176000' => 'gma', 'Gohir.A01G063600' => 'ghi', 'Gohir.A01G170301' => 'ghi', 'Gohir.A02G060500' => 'ghi', 'Gohir.A05G133850' => 'ghi', 'Gohir.A05G161400' => 'ghi', 'Gohir.A06G012900' => 'ghi', 'Gohir.A06G035901' => 'ghi', 'Gohir.A06G127100' => 'ghi', 'Gohir.A06G210500' => 'ghi', 'Gohir.A08G008650' => 'ghi', 'Gohir.A09G072700' => 'ghi', 'Gohir.A09G088301' => 'ghi', 'Gohir.A10G040600' => 'ghi', 'Gohir.A12G036300' => 'ghi', 'Gohir.A12G143350' => 'ghi', 'Gohir.A12G165500' => 'ghi', 'Gohir.A13G145700' => 'ghi', 'Gohir.D01G050000' => 'ghi', 'Gohir.D01G051366' => 'ghi', 'Gohir.D01G161350' => 'ghi', 'Gohir.D02G065900' => 'ghi', 'Gohir.D05G164200' => 'ghi', 'Gohir.D05G355500' => 'ghi', 'Gohir.D06G010400' => 'ghi', 'Gohir.D06G111250' => 'ghi', 'Gohir.D06G132000' => 'ghi', 'Gohir.D06G210500' => 'ghi', 'Gohir.D07G165675' => 'ghi', 'Gohir.D08G062240' => 'ghi', 'Gohir.D08G086101' => 'ghi', 'Gohir.D08G138060' => 'ghi', 'Gohir.D09G072300' => 'ghi', 'Gohir.D10G041400' => 'ghi', 'Gohir.D11G191020' => 'ghi', 'Gohir.D11G212066' => 'ghi', 'Gohir.D12G036300' => 'ghi', 'Gohir.D12G168600' => 'ghi', 'Gohir.D13G150600' => 'ghi', 'Gorai.001G057300' => 'gra', 'Gorai.002G069900' => 'gra', 'Gorai.002G200000' => 'gra', 'Gorai.003G067600' => 'gra', 'Gorai.005G074800' => 'gra', 'Gorai.006G087300' => 'gra', 'Gorai.008G037500' => 'gra', 'Gorai.008G181400' => 'gra', 'Gorai.009G169400' => 'gra', 'Gorai.009G387900' => 'gra', 'Gorai.010G013300' => 'gra', 'Gorai.010G153800' => 'gra', 'Gorai.010G255800' => 'gra', 'Gorai.011G043700' => 'gra', 'Gorai.011G198900' => 'gra', 'Gorai.013G168400' => 'gra', 'GSVIVG01005212001' => 'vvi', 'GSVIVG01006163001' => 'vvi', 'GSVIVG01009625001' => 'vvi', 'GSVIVG01014338001' => 'vvi', 'GSVIVG01020005001' => 'vvi', 'GSVIVG01021450001' => 'vvi', 'GSVIVG01023975001' => 'vvi', 'GSVIVG01034490001' => 'vvi', 'HanXRQChr04g0112071' => 'han', 'HanXRQChr05g0131151' => 'han', 'HanXRQChr09g0262371' => 'han', 'HanXRQChr09g0268401' => 'han', 'HanXRQChr10g0279241' => 'han', 'HanXRQChr10g0297961' => 'han', 'HanXRQChr11g0326231' => 'han', 'HanXRQChr11g0328471' => 'han', 'HanXRQChr16g0507941' => 'han', 'HanXRQChr17g0560211' => 'han', 'Haze_02108' => 'cav', 'Haze_02428' => 'cav', 'Haze_05593' => 'cav', 'Haze_06448' => 'cav', 'Haze_09427' => 'cav', 'Haze_12022' => 'cav', 'Haze_17612' => 'cav', 'Haze_17928' => 'cav', 'Hma1.2p1_0032F.1_g019250' => 'hma', 'Hma1.2p1_0163F.1_g072690' => 'hma', 'Hma1.2p1_0265F.1_g106710' => 'hma', 'Hma1.2p1_0286F.1_g113970' => 'hma', 'Hma1.2p1_0363F.1_g136640' => 'hma', 'Hma1.2p1_0584F.1_g183470' => 'hma', 'Hma1.2p1_0885F.1_g232570' => 'hma', 'HPP92_006022' => 'vpl', 'HPP92_007320' => 'vpl', 'HPP92_011521' => 'vpl', 'HPP92_019387' => 'vpl', 'HPP92_024038' => 'vpl', 'Hund05891' => 'sun', 'Hund06450' => 'sun', 'Hund12053' => 'sun', 'Hund16800' => 'sun', 'Hund21222' => 'sun', 'Hund22896' => 'sun', 'Hund23746' => 'sun', 'Hund27083' => 'sun', 'Lalb_Chr02g0141831' => 'lal', 'Lalb_Chr02g0141841' => 'lal', 'Lalb_Chr05g0220411' => 'lal', 'Lalb_Chr06g0162081' => 'lal', 'Lalb_Chr09g0327651' => 'lal', 'Lalb_Chr13g0295051' => 'lal', 'Lalb_Chr15g0086801' => 'lal', 'Lalb_Chr16g0383781' => 'lal', 'Lalb_Chr16g0383791' => 'lal', 'Lalb_Chr18g0055441' => 'lal', 'Lalb_Chr18g0059611' => 'lal', 'Lalb_Chr20g0109661' => 'lal', 'Lalb_Chr20g0109831' => 'lal', 'Lalb_Chr20g0121871' => 'lal', 'Lalb_Chr22g0355361' => 'lal', 'Lalb_Chr25g0286371' => 'lal', 'Lj1A1187G43' => 'lonja', 'Lj1A1205T50' => 'lonja', 'Lj1A800G33' => 'lonja', 'Lj1C1187T7' => 'lonja', 'Lj1C843T11' => 'lonja', 'Lj1g0010940' => 'lja', 'Lj2A288T69' => 'lonja', 'Lj3g0024276' => 'lja', 'Lj4A47T76' => 'lonja', 'Lj4g0005805' => 'lja', 'Lj4g0006097' => 'lja', 'Lj4g0008528' => 'lja', 'Lj4g0024907' => 'lja', 'Lj5g0012472' => 'lja', 'Lj5g0018648' => 'lja', 'Lj6C789G1' => 'lonja', 'Lj6g0004000' => 'lja', 'Lj7A292G67' => 'lonja', 'Lj7A292T64' => 'lonja', 'Lj9A400T58' => 'lonja', 'Lsat_1_v5_gn_1_126181' => 'lsa', 'Lsat_1_v5_gn_4_123041' => 'lsa', 'Lsat_1_v5_gn_4_133620' => 'lsa', 'Lsat_1_v5_gn_4_53221' => 'lsa', 'Lsat_1_v5_gn_4_71961' => 'lsa', 'Lsat_1_v5_gn_7_105241' => 'lsa', 'Lsat_1_v5_gn_7_21361' => 'lsa', 'Lsat_1_v5_gn_7_28860' => 'lsa', 'Lsat_1_v5_gn_7_31260' => 'lsa', 'Lsat_1_v5_gn_8_52801' => 'lsa', 'Manes.02G191400' => 'mes', 'Manes.03G110100' => 'mes', 'Manes.04G071100' => 'mes', 'Manes.05G100500' => 'mes', 'Manes.05G164700' => 'mes', 'Manes.15G087000' => 'mes', 'Manes.15G121500' => 'mes', 'Manes.16G028300' => 'mes', 'Manes.17G046100' => 'mes', 'Manes.17G069800' => 'mes', 'Manes.18G100500' => 'mes', 'Mapoly0002s0109' => 'mpo', 'Mapoly0024s0007' => 'mpo', 'Mapoly0089s0032' => 'mpo', 'MBI04_g42241_MAGBIO' => 'mbi', 'MBI05_g11988_MAGBIO' => 'mbi', 'MBI05_g35452_MAGBIO' => 'mbi', 'MBI07_g30179_MAGBIO' => 'mbi', 'MBI07_g35859_MAGBIO' => 'mbi', 'MBI07_g35860_MAGBIO' => 'mbi', 'MBI07_g37166_MAGBIO' => 'mbi', 'MBI08_g18172_MAGBIO' => 'mbi', 'MBI09_g08441_MAGBIO' => 'mbi', 'MBI13_g01676_MAGBIO' => 'mbi', 'MBI14_g42955_MAGBIO' => 'mbi', 'MBI16_g13161_MAGBIO' => 'mbi', 'MBI17_g27204_MAGBIO' => 'mbi', 'MBI19_g21595_MAGBIO' => 'mbi', 'MD00G1148400' => 'mdo', 'MD02G1301200' => 'mdo', 'MD03G1227800' => 'mdo', 'MD05G1041100' => 'mdo', 'MD05G1124800' => 'mdo', 'MD05G1284000' => 'mdo', 'MD05G1338800' => 'mdo', 'MD05G1338900' => 'mdo', 'MD07G1022800' => 'mdo', 'MD10G1047500' => 'mdo', 'MD10G1127500' => 'mdo', 'MD10G1262300' => 'mdo', 'MD10G1293800' => 'mdo', 'MD16G1074300' => 'mdo', 'Medtr1g021670' => 'mtr', 'Medtr1g096320' => 'mtr', 'Medtr2g013690' => 'mtr', 'Medtr2g019450' => 'mtr', 'Medtr2g085170' => 'mtr', 'Medtr4g088785' => 'mtr', 'Medtr8g055930' => 'mtr', 'Medtr8g085850' => 'mtr', 'MELO3C002605.2' => 'cme', 'MELO3C003891.2' => 'cme', 'MELO3C004012.2' => 'cme', 'MELO3C007134.2' => 'cme', 'MELO3C008118.2' => 'cme', 'MELO3C016700.2' => 'cme', 'MELO3C024127.2' => 'cme', 'MELO3C033361.2' => 'cme', 'MELO3C033362.2' => 'cme', 'Migut.C00430' => 'egut', 'Migut.C01246' => 'egut', 'Migut.E00101' => 'egut', 'Migut.H01486' => 'egut', 'Migut.H01939' => 'egut', 'Migut.K00360' => 'egut', 'Migut.M00910' => 'egut', 'Migut.M01139' => 'egut', 'Migut.N02677' => 'egut', 'MSTRG.13252' => 'ama', 'MSTRG.14701' => 'ama', 'MSTRG.1521' => 'ama', 'MSTRG.15884' => 'ama', 'MSTRG.16242' => 'ama', 'MSTRG.22285' => 'ama', 'MSTRG.22444' => 'ama', 'MSTRG.2349' => 'ama', 'MSTRG.26308' => 'ama', 'MSTRG.28296' => 'ama', 'MSTRG.9895' => 'ama', 'Nitab4.5_0000110g0060' => 'nta', 'Nitab4.5_0000420g0130' => 'nta', 'Nitab4.5_0000422g0030' => 'nta', 'Nitab4.5_0000560g0180' => 'nta', 'Nitab4.5_0000703g0100' => 'nta', 'Nitab4.5_0000786g0200' => 'nta', 'Nitab4.5_0001336g0020' => 'nta', 'Nitab4.5_0001796g0030' => 'nta', 'Nitab4.5_0003348g0060' => 'nta', 'Nitab4.5_0003698g0040' => 'nta', 'Nitab4.5_0003942g0090' => 'nta', 'Nitab4.5_0004775g0070' => 'nta', 'Nitab4.5_0004864g0030' => 'nta', 'Nitab4.5_0005615g0020' => 'nta', 'Nitab4.5_0009288g0030' => 'nta', 'Nitab4.5_0009341g0010' => 'nta', 'Nitab4.5_0009535g0010' => 'nta', 'Nn1g03995' => 'nnu', 'Nn1g04100' => 'nnu', 'Nn1g06530' => 'nnu', 'Nn3g16404' => 'nnu', 'Nn3g17212' => 'nnu', 'Nn3g20776' => 'nnu', 'Nn3g21923' => 'nnu', 'Nn5g27737' => 'nnu', 'Nn5g29461' => 'nnu', 'Nn7g38355' => 'nnu', 'Nn8g39873' => 'nnu', 'Oeu000548.2' => 'oeu', 'Oeu004672.1' => 'oeu', 'Oeu015605.2' => 'oeu', 'Oeu016092.1' => 'oeu', 'Oeu017879.3' => 'oeu', 'Oeu024910.1' => 'oeu', 'Oeu028965.1' => 'oeu', 'Oeu031269.1' => 'oeu', 'Oeu031270.1' => 'oeu', 'Oeu032535.1' => 'oeu', 'Oeu034151.1' => 'oeu', 'Oeu034152.1' => 'oeu', 'Oeu034588.2' => 'oeu', 'Oeu050846.1' => 'oeu', 'Oeu050849.2' => 'oeu', 'Oeu051063.2' => 'oeu', 'Oeu052368.1' => 'oeu', 'Oeu052370.1' => 'oeu', 'Os01g0210400' => 'osa', 'Os01g0304300' => 'osa', 'Os01g0749100' => 'osa', 'Os02g0745800' => 'osa', 'Os03g0769050' => 'osa', 'Os05g0531500' => 'osa', 'Os06g0724300' => 'osa', 'Os11g0198100' => 'osa', 'Peaxi162Scf00069g01425' => 'pax', 'Peaxi162Scf00280g00811' => 'pax', 'Peaxi162Scf00310g00615' => 'pax', 'Peaxi162Scf00362g00542' => 'pax', 'Peaxi162Scf00461g00310' => 'pax', 'Peaxi162Scf00530g00118' => 'pax', 'Peaxi162Scf00541g00057' => 'pax', 'Peaxi162Scf00661g00017' => 'pax', 'Peaxi162Scf00926g00027' => 'pax', 'Peaxi162Scf01064g00263' => 'pax', 'Peaxi162Scf01211g00135' => 'pax', 'PGR004G2336' => 'pgr', 'PGR042G0327' => 'pgr', 'PGR042G1957' => 'pgr', 'PGR042G2003' => 'pgr', 'PGR042G3929' => 'pgr', 'PGR083G1137' => 'pgr', 'PGR083G1364' => 'pgr', 'PGSC0003DMG400003381' => 'stu', 'PGSC0003DMG400003417' => 'stu', 'PGSC0003DMG400008981' => 'stu', 'PGSC0003DMG400012417' => 'stu', 'PGSC0003DMG400012823' => 'stu', 'PGSC0003DMG400016885' => 'stu', 'PGSC0003DMG400022812' => 'stu', 'PGSC0003DMG400029726' => 'stu', 'PGSC0003DMG401009243' => 'stu', 'PGSC0003DMG401031505' => 'stu', 'PGSC0003DMG402031505' => 'stu', 'Phvul.001G017600' => 'pvu', 'Phvul.002G193500' => 'pvu', 'Phvul.002G228900' => 'pvu', 'Phvul.002G236800' => 'pvu', 'Phvul.003G049500' => 'pvu', 'Phvul.005G072000' => 'pvu', 'Phvul.006G164800' => 'pvu', 'Phvul.006G185100' => 'pvu', 'Phvul.007G090000' => 'pvu', 'Potri.001G399800' => 'ptr', 'Potri.002G149900' => 'ptr', 'Potri.004G044100' => 'ptr', 'Potri.004G177600' => 'ptr', 'Potri.009G138000' => 'ptr', 'Potri.010G094000' => 'ptr', 'Potri.011G053000' => 'ptr', 'Potri.011G119300' => 'ptr', 'Potri.013G113700' => 'ptr', 'Potri.018G107800' => 'ptr', 'Potri.019G084100' => 'ptr', 'Pp3c14_23720' => 'ppa', 'Pp3c16_6340' => 'ppa', 'Pp3c23_13420' => 'ppa', 'Pp3c24_2740' => 'ppa', 'Pp3c25_860' => 'ppa', 'Pp3c8_21750' => 'ppa', 'Prupe.1G273000' => 'ppe', 'Prupe.1G273700' => 'ppe', 'Prupe.1G274100' => 'ppe', 'Prupe.2G023300' => 'ppe', 'Prupe.4G048000' => 'ppe', 'Prupe.4G080400' => 'ppe', 'Prupe.4G181200' => 'ppe', 'Prupe.8G056900' => 'ppe', 'Prupe.8G168700' => 'ppe', 'Psat1g189080' => 'psa', 'Psat1g204760' => 'psa', 'Psat4g175560' => 'psa', 'Psat4g177720' => 'psa', 'Psat5g244240' => 'psa', 'Psat6g010720' => 'psa', 'Psat6g187200' => 'psa', 'Psat7g072040' => 'psa', 'PSO017G3501' => 'pso', 'PSO063G2148' => 'pso', 'PSO063G5608' => 'pso', 'PSO210G6392' => 'pso', 'PSO541G2319' => 'pso', 'PSO541G2836' => 'pso', 'PSO541G4012' => 'pso', 'PSO541G6253' => 'pso', 'PSO675G0580' => 'pso', 'PSO675G0856' => 'pso', 'PSO675G5635' => 'pso', 'PSO675G9157' => 'pso', 'PSO832G1660' => 'pso', 'PSO832G1969' => 'pso', 'QL02p007186' => 'qlo', 'QL02p033904' => 'qlo', 'QL03p064391' => 'qlo', 'QL05p040593' => 'qlo', 'QL05p058242' => 'qlo', 'QL08p021825' => 'qlo', 'QL11p004981' => 'qlo', 'RcHm_v2.0_Chr1g0318301' => 'rch', 'RcHm_v2.0_Chr4g0418501' => 'rch', 'RcHm_v2.0_Chr4g0439971' => 'rch', 'RcHm_v2.0_Chr5g0008541' => 'rch', 'RcHm_v2.0_Chr5g0014101' => 'rch', 'RcHm_v2.0_Chr5g0014131' => 'rch', 'RcHm_v2.0_Chr5g0033621' => 'rch', 'RcHm_v2.0_Chr6g0272041' => 'rch', 'RcHm_v2.0_Chr6g0278831' => 'rch', 'Rhsim02G0130400' => 'rsi', 'Rhsim02G0171100' => 'rsi', 'Rhsim05G0053000' => 'rsi', 'Rhsim05G0053100' => 'rsi', 'Rhsim06G0096500' => 'rsi', 'Rhsim06G0096600' => 'rsi', 'Rhsim06G0199100' => 'rsi', 'Rhsim12G0062300' => 'rsi', 'Rhsim12G0062800' => 'rsi', 'Sabra02G0118600' => 'sbr', 'Sabra04G0027300' => 'sbr', 'Sabra04G0119500' => 'sbr', 'Sabra08G0112500' => 'sbr', 'Sabra11G0036800' => 'sbr', 'Sabra11G0103800' => 'sbr', 'Sabra13G0096300' => 'sbr', 'Sabra16G0262300' => 'sbr', 'Sabra18G0091700' => 'sbr', 'Sabra19G0095400' => 'sbr', 'SalBow6G3080' => 'sbo', 'SalBow7G1157' => 'sbo', 'SalBow7G2123' => 'sbo', 'SalBow7G2285' => 'sbo', 'SalBow7G3537' => 'sbo', 'SalBow8G2947' => 'sbo', 'SalBow8G4463' => 'sbo', 'SalBow8G5466' => 'sbo', 'Sc01g0001750' => 'sci', 'Sc02g0006640' => 'sci', 'Sc02g0006670' => 'sci', 'Sc04g0008220' => 'sci', 'Sc05g0006190' => 'sci', 'Sc08g0002760' => 'sci', 'Sc17g0006170' => 'sci', 'Sc22g0002050' => 'sci', 'Sc23g0001190' => 'sci', 'Sc24g0000980' => 'sci', 'Sed0006245' => 'sed', 'Sed0007543' => 'sed', 'Sed0009411' => 'sed', 'Sed0010765' => 'sed', 'Sed0012944' => 'sed', 'Sed0014682' => 'sed', 'Sed0016174' => 'sed', 'Sed0016796' => 'sed', 'Sed0020317' => 'sed', 'Sed0021467' => 'sed', 'SEGI_01316' => 'sgi', 'SEGI_03374' => 'sgi', 'SEGI_16265' => 'sgi', 'SEGI_18569' => 'sgi', 'SEGI_20351' => 'sgi', 'SEGI_26395' => 'sgi', 'SEGI_29469' => 'sgi', 'SEGI_34771' => 'sgi', 'SEGI_36769' => 'sgi', 'SEGI_37139' => 'sgi', 'SGA_v2.0_scaffold100G29687' => 'sas', 'SGA_v2.0_scaffold118G32472' => 'sas', 'SGA_v2.0_scaffold14G07051' => 'sas', 'SGA_v2.0_scaffold183G39845' => 'sas', 'SGA_v2.0_scaffold1G00174' => 'sas', 'SGA_v2.0_scaffold22G09714' => 'sas', 'SGA_v2.0_scaffold333G48992' => 'sas', 'SGA_v2.0_scaffold46G17491' => 'sas', 'SGA_v2.0_scaffold49G18294' => 'sas', 'SGA_v2.0_scaffold63G21658' => 'sas', 'SHI01741' => 'shi', 'SHI05771' => 'shi', 'SHI18077' => 'shi', 'SHI20525' => 'shi', 'SHI20527' => 'shi', 'SHI20528' => 'shi', 'SMO172G0185' => 'smo', 'SMO198G0020' => 'smo', 'SMO351G0006' => 'smo', 'SMO356G0118' => 'smo', 'SMO358G0296' => 'smo', 'SMO367G0079' => 'smo', 'SMO367G1277' => 'smo', 'Solyc01g014220.3' => 'sly', 'Solyc01g111770.2' => 'sly', 'Solyc02g078180.3' => 'sly', 'Solyc03g006430.3' => 'sly', 'Solyc03g006456.1' => 'sly', 'Solyc03g079860.2' => 'sly', 'Solyc04g079770.3' => 'sly', 'Solyc05g007430.4' => 'sly', 'Solyc07g063150.3' => 'sly', 'Solyc08g016620.3' => 'sly', 'Solyc09g057590.3' => 'sly', 'Solyc09g057600.1' => 'sly', 'Solyc10g009050.3' => 'sly', 'Solyc11g017420.2' => 'sly', 'Sopen01g053810' => 'spe', 'Sopen02g023040' => 'spe', 'Sopen03g002440' => 'spe', 'Sopen04g033350' => 'spe', 'Sopen05g003310' => 'spe', 'Sopen07g004050' => 'spe', 'Sopen07g031340' => 'spe', 'Sopen08g006990' => 'spe', 'Sopen10g004830' => 'spe', 'Sopen11g009370' => 'spe', 'Sp1g24450' => 'spa', 'Sp1g29670' => 'spa', 'Sp1g39600' => 'spa', 'Sp2g11080' => 'spa', 'Sp2g13970' => 'spa', 'Sp4g16130' => 'spa', 'Sp6g13080' => 'spa', 'Sp7g37270' => 'spa', 'TAR371G0065' => 'tar', 'TAR376G0340' => 'tar', 'TAR376G0435' => 'tar', 'TAR381G0002' => 'tar', 'TAR381G1236' => 'tar', 'TAR624G0055' => 'tar', 'TAR624G0324' => 'tar', 'TAR624G0696' => 'tar', 'TAR624G0906' => 'tar', 'TAR625G0107' => 'tar', 'TAR626G0015' => 'tar', 'TAR626G1356' => 'tar', 'TAR627G0888' => 'tar', 'TAR628G0399' => 'tar', 'TAR628G1327' => 'tar', 'TAR629G2831' => 'tar', 'TAR629G2874' => 'tar', 'TAR633G1432' => 'tar', 'TAR633G2771' => 'tar', 'THA.LOC104803394' => 'tha', 'THA.LOC104805153' => 'tha', 'THA.LOC104806784' => 'tha', 'THA.LOC104810473' => 'tha', 'THA.LOC104813100' => 'tha', 'THA.LOC104814215' => 'tha', 'THA.LOC104815554' => 'tha', 'THA.LOC104820544' => 'tha', 'THA.LOC104824754' => 'tha', 'THA.LOC104827717' => 'tha', 'Thecc.02G031400' => 'tca', 'Thecc.02G055900' => 'tca', 'Thecc.02G350800' => 'tca', 'Thecc.06G150900' => 'tca', 'Thecc.06G186600' => 'tca', 'Thecc.07G089600' => 'tca', 'Thecc.08G020400' => 'tca', 'Thecc.08G182100' => 'tca', 'Thhalv10000873m.g' => 'esa', 'Thhalv10004185m.g' => 'esa', 'Thhalv10006981m.g' => 'esa', 'Thhalv10007204m.g' => 'esa', 'Thhalv10011374m.g' => 'esa', 'Thhalv10013482m.g' => 'esa', 'Thhalv10017801m.g' => 'esa', 'Thhalv10024983m.g' => 'esa', 'TPR.G12072' => 'tpr', 'TPR.G15769' => 'tpr', 'TPR.G16504' => 'tpr', 'TPR.G16506' => 'tpr', 'TPR.G24345' => 'tpr', 'TPR.G26666' => 'tpr', 'TPR.G27320' => 'tpr', 'TPR.G31819' => 'tpr', 'TPR.G38879' => 'tpr', 'TPR.G39015' => 'tpr', 'TPR.G8819' => 'tpr', 'TWI09G0924' => 'twi', 'TWI12G0811' => 'twi', 'TWI12G1294' => 'twi', 'TWI31G0150' => 'twi', 'TWI36G1262' => 'twi', 'TWI38G1287' => 'twi', 'TWI38G1633' => 'twi', 'TWI38G1982' => 'twi', 'TWI39G0116' => 'twi', 'TWI60G1011' => 'twi', 'TWI63G0171' => 'twi', 'TWI73G0839' => 'twi', 'TWI79G1511' => 'twi', 'unitig_0.g915' => 'ugi', 'unitig_0.g916' => 'ugi', 'unitig_21.g20219' => 'ugi', 'unitig_21.g20416' => 'ugi', 'unitig_578.g16132' => 'ugi', 'unitig_578.g16718' => 'ugi', 'unitig_62.g23481' => 'ugi', 'unitig_744.g24535' => 'ugi', 'unitig_749.g13525' => 'ugi', 'vmacro01248' => 'vma', 'vmacro02290' => 'vma', 'vmacro10946' => 'vma', 'vmacro11865' => 'vma', 'vmacro12493' => 'vma', 'vmacro17322' => 'vma', 'vmacro21599' => 'vma', 'vmacro23041' => 'vma', 'VMungo0251G0004' => 'vmu', 'VMungo0251G2639' => 'vmu', 'VMungo0251G2967' => 'vmu', 'VMungo0540G0864' => 'vmu', 'VMungo0540G1569' => 'vmu', 'VMungo0647G0317' => 'vmu', 'VMungo0720G1373' => 'vmu', 'VMungo0720G1508' => 'vmu', 'VMungo1080G0485' => 'vmu', 'VMungo1215G3177' => 'vmu', 'Zm00001eb112600' => 'zma', 'Zm00001eb120220' => 'zma', 'Zm00001eb153240' => 'zma', 'Zm00001eb168880' => 'zma', 'Zm00001eb213920' => 'zma', 'Zm00001eb228280' => 'zma', 'Zm00001eb254580' => 'zma', 'Zm00001eb272180' => 'zma', 'Zm00001eb293190' => 'zma', 'Zm00001eb322930' => 'zma', 'Zm00001eb353360' => 'zma', 'Zm00001eb353390' => 'zma', 'Zm00001eb353430' => 'zma', 'Zm00001eb353440' => 'zma', 'Zm00001eb353780' => 'zma' ), 'gf_id' => 'HOM05D000499', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000499' ), 'data_identifier' => 'HOM05D000499', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000499', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1066', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p29780' => 'bna', 'A02p33180' => 'bna', 'A03p16470' => 'bna', 'A03p66010' => 'bna', 'A04p25970' => 'bna', 'A06p01270' => 'bna', 'A06p46080' => 'bna', 'A07p11400' => 'bna', 'A08p01840' => 'bna', 'A08p08230' => 'bna', 'A08p25740' => 'bna', 'A09p32070' => 'bna', 'A09p37830' => 'bna', 'A09p42840' => 'bna', 'A09p42850' => 'bna', 'Aa31LG10G2060' => 'aar', 'Aa31LG2G7410' => 'aar', 'Aa31LG6G10200' => 'aar', 'Aa31LG6G16680' => 'aar', 'Aa31LG6G8470' => 'aar', 'Aa31LG9G12730' => 'aar', 'Aa31LG9G13680' => 'aar', 'Aa31LG9G14920' => 'aar', 'Aa31LG9G6650' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4977' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5467' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3254' => 'aag', 'Actinidia02578' => 'ach', 'Actinidia07693' => 'ach', 'Actinidia08413' => 'ach', 'Actinidia08414' => 'ach', 'Actinidia15289' => 'ach', 'Actinidia19871' => 'ach', 'Actinidia21475' => 'ach', 'Actinidia22576' => 'ach', 'Actinidia28327' => 'ach', 'Actinidia32491' => 'ach', 'Actinidia39463' => 'ach', 'Actinidia39571' => 'ach', 'Ah.01g013750' => 'amhyb', 'Ah.01g023210' => 'amhyb', 'Ah.04g164850' => 'amhyb', 'Ah.05g178060' => 'amhyb', 'Ah.07g204270' => 'amhyb', 'Ah.07g208480' => 'amhyb', 'Ah.09g237410' => 'amhyb', 'Ah.14g089460' => 'amhyb', 'AL1G41790' => 'aly', 'AL1G49050' => 'aly', 'AL1G53810' => 'aly', 'AL1G61400' => 'aly', 'AL4G18580' => 'aly', 'AL5G12510' => 'aly', 'AL5G12540' => 'aly', 'AL6G43230' => 'aly', 'AL7G10370' => 'aly', 'AL7G19250' => 'aly', 'AL8G12240' => 'aly', 'AL8G18540' => 'aly', 'Aqoxy1G02409' => 'aox', 'Aqoxy2G03993' => 'aox', 'Aqoxy3G03357' => 'aox', 'Aqoxy4G00785' => 'aox', 'Aqoxy5G02598' => 'aox', 'Aqoxy6G00132' => 'aox', 'Aqoxy7G01776' => 'aox', 'Aqoxy7G02316' => 'aox', 'Aqoxy7G03973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.12AFKW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B8730' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27IQR1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3F75VG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3RE0GA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41TCQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.527VTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FIR39' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5W8UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DA38EV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ63HS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H1I32C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HC27T5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4M8AP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7N3CZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9UVDZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LS1NQA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT1D4B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SKC4TM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCFV76' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF9Q1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQWD9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1ZM88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WE07RT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YCK7VH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJE6Q6' => 'arhy', 'AT1G28240' => 'ath', 'AT1G34550' => 'ath', 'AT1G53040' => 'ath', 'AT2G02910' => 'ath', 'AT4G09630' => 'ath', 'AT4G38500' => 'ath', 'AT5G42660' => 'ath', 'AT5G46220' => 'ath', 'ATR0152G026' => 'atr', 'ATR0564G343' => 'atr', 'ATR0706G151' => 'atr', 'ATR0733G207' => 'atr', 'ATR0751G234' => 'atr', 'ATR0807G048' => 'atr', 'ATR1091G084' => 'atr', 'Atru.chr10.1229' => 'acertr', 'Atru.chr10.1230' => 'acertr', 'Atru.chr10.1874' => 'acertr', 'Atru.chr11.1808' => 'acertr', 'Atru.chr13.1795' => 'acertr', 'Atru.chr13.570' => 'acertr', 'Atru.chr2.2608' => 'acertr', 'Atru.chr2.2609' => 'acertr', 'Atru.chr5.3428' => 'acertr', 'Atru.chr8.1171' => 'acertr', 'AUR62004651' => 'cqu', 'AUR62008675' => 'cqu', 'AUR62010014' => 'cqu', 'AUR62013004' => 'cqu', 'AUR62014825' => 'cqu', 'AUR62015015' => 'cqu', 'AUR62015151' => 'cqu', 'AUR62017020' => 'cqu', 'AUR62019422' => 'cqu', 'AUR62023570' => 'cqu', 'AUR62025571' => 'cqu', 'AUR62029098' => 'cqu', 'AUR62033863' => 'cqu', 'AUR62034296' => 'cqu', 'AUR62040075' => 'cqu', 'BcaB02g07334' => 'bca', 'BcaB02g10575' => 'bca', 'BcaB03g12119' => 'bca', 'BcaB03g12120' => 'bca', 'BcaB03g13945' => 'bca', 'BcaB04g17123' => 'bca', 'BcaB04g17867' => 'bca', 'BcaB04g19839' => 'bca', 'BcaB07g30317' => 'bca', 'BcaB07g32432' => 'bca', 'BcaB07g33362' => 'bca', 'BcaB08g36611' => 'bca', 'BcaC01g00028' => 'bca', 'BcaC01g01356' => 'bca', 'BcaC01g02034' => 'bca', 'BcaC01g06051' => 'bca', 'BcaC03g16839' => 'bca', 'BcaC03g17176' => 'bca', 'BcaC05g26829' => 'bca', 'BcaC06g31490' => 'bca', 'BcaC06g35344' => 'bca', 'BcaC06g36570' => 'bca', 'BcaC07g37537' => 'bca', 'BcaC08g43491' => 'bca', 'BcaC08g43773' => 'bca', 'BcaNung00234' => 'bca', 'BcaNung01982' => 'bca', 'BcaNung03707' => 'bca', 'BcaNung06454' => 'bca', 'BolC2t10762H' => 'bol', 'BolC2t11191H' => 'bol', 'BolC3t14322H' => 'bol', 'BolC3t19747H' => 'bol', 'BolC3t21425H' => 'bol', 'BolC4t27800H' => 'bol', 'BolC5t31423H' => 'bol', 'BolC6t35951H' => 'bol', 'BolC6t36282H' => 'bol', 'BolC7t40678H' => 'bol', 'BolC7t40679H' => 'bol', 'BolC7t42222H' => 'bol', 'BolC7t43492H' => 'bol', 'BolC7t46785H' => 'bol', 'BolC8t47853H' => 'bol', 'BolC9t56805H' => 'bol', 'BraA02t08000Z' => 'bra', 'BraA02t08341Z' => 'bra', 'BraA03t10936Z' => 'bra', 'BraA03t15657Z' => 'bra', 'BraA04t18100Z' => 'bra', 'BraA05t20523Z' => 'bra', 'BraA06t23353Z' => 'bra', 'BraA06t27473Z' => 'bra', 'BraA06t27769Z' => 'bra', 'BraA07t28928Z' => 'bra', 'BraA08t32236Z' => 'bra', 'BraA08t32841Z' => 'bra', 'BraA08t34524Z' => 'bra', 'BraA09t38742Z' => 'bra', 'BraA09t39295Z' => 'bra', 'C02p47180' => 'bna', 'C02p50990' => 'bna', 'C03p19360' => 'bna', 'C03p74950' => 'bna', 'C03p91000' => 'bna', 'C04p63260' => 'bna', 'C05p27050' => 'bna', 'C06p08750' => 'bna', 'C06p11490' => 'bna', 'C07p02820' => 'bna', 'C07p17180' => 'bna', 'C07p29440' => 'bna', 'C07p63730' => 'bna', 'C09p39260' => 'bna', 'CAN.G1164.34' => 'can', 'CAN.G1164.39' => 'can', 'CAN.G1530.3' => 'can', 'CAN.G162.61' => 'can', 'CAN.G176.6' => 'can', 'CAN.G289.49' => 'can', 'CAN.G370.21' => 'can', 'CAN.G370.22' => 'can', 'CAN.G371.117' => 'can', 'CAN.G58.37' => 'can', 'CAN.G588.98' => 'can', 'CANSAT21G2266' => 'cansat', 'CANSAT25G2799' => 'cansat', 'CANSAT35G0862' => 'cansat', 'CANSAT35G1704' => 'cansat', 'CANSAT35G1760' => 'cansat', 'CANSAT56G3971' => 'cansat', 'CANSAT56G4116' => 'cansat', 'CANSAT80G1259' => 'cansat', 'CARHR027730' => 'chi', 'CARHR033880' => 'chi', 'CARHR043270' => 'chi', 'CARHR145330' => 'chi', 'CARHR145340' => 'chi', 'CARHR175570' => 'chi', 'CARHR181570' => 'chi', 'CARHR258470' => 'chi', 'CARHR260490' => 'chi', 'CARHR294220' => 'chi', 'Carub.0001s2668' => 'cru', 'Carub.0001s3257' => 'cru', 'Carub.0001s4220' => 'cru', 'Carub.0005s0179' => 'cru', 'Carub.0006s2807' => 'cru', 'Carub.0007s0039' => 'cru', 'Carub.0008s0169' => 'cru', 'Carub.0008s0636' => 'cru', 'Ca_00338_v3' => 'car', 'Ca_00542_v3' => 'car', 'Ca_01844_v3' => 'car', 'Ca_10611_v3' => 'car', 'Ca_13326_v3' => 'car', 'Ca_17944_v3' => 'car', 'Ca_18546_v3' => 'car', 'Ca_24219_v3' => 'car', 'Ca_29972_v3' => 'car', 'CBR_g3681' => 'cbr', 'CBR_g40021' => 'cbr', 'Cc01_g08140' => 'ccan', 'Cc02_g13410' => 'ccan', 'Cc02_g37480' => 'ccan', 'Cc05_g12030' => 'ccan', 'Cc09_g03370' => 'ccan', 'Cc09_g10300' => 'ccan', 'Cc10_g03530' => 'ccan', 'Cc10_g11380' => 'ccan', 'CDE01G0176' => 'cde', 'CDE02G0675' => 'cde', 'CDE02G0942' => 'cde', 'CDE02G1153' => 'cde', 'CDE02G4177' => 'cde', 'CDE04G2117' => 'cde', 'CDE04G2736' => 'cde', 'CDE08G1161' => 'cde', 'CDE09G1238' => 'cde', 'Cfa000467' => 'cfa', 'Cfa000947' => 'cfa', 'Cfa004969' => 'cfa', 'Cfa005284' => 'cfa', 'Cfa008993' => 'cfa', 'Cfa018187' => 'cfa', 'Cfa018454' => 'cfa', 'Cfa020585' => 'cfa', 'Ciclev10000424m.g' => 'ccl', 'Ciclev10003605m.g' => 'ccl', 'Ciclev10007828m.g' => 'ccl', 'Ciclev10014620m.g' => 'ccl', 'Ciclev10015169m.g' => 'ccl', 'Ciclev10018291m.g' => 'ccl', 'Ciclev10028256m.g' => 'ccl', 'Ciclev10033822m.g' => 'ccl', 'CiPaw.05G060300' => 'cil', 'CiPaw.05G085000' => 'cil', 'CiPaw.06G083700' => 'cil', 'CiPaw.06G120300' => 'cil', 'CiPaw.09G060500' => 'cil', 'CiPaw.09G123800' => 'cil', 'CiPaw.11G169700' => 'cil', 'CiPaw.12G118300' => 'cil', 'CiPaw.15G071000' => 'cil', 'CiPaw.15G081900' => 'cil', 'ClCG01G024610' => 'cla', 'ClCG03G006070' => 'cla', 'ClCG05G019250' => 'cla', 'ClCG09G009500' => 'cla', 'ClCG11G008200' => 'cla', 'ClCG11G018080' => 'cla', 'COL.COLO4_17373' => 'col', 'COL.COLO4_22994' => 'col', 'COL.COLO4_26389' => 'col', 'COL.COLO4_27170' => 'col', 'COL.COLO4_31074' => 'col', 'COL.COLO4_31465' => 'col', 'COL.COLO4_36438' => 'col', 'COL.COLO4_36439' => 'col', 'Cpa.g.c38781' => 'cpa', 'Cpa.g.sc128.12' => 'cpa', 'Cpa.g.sc166.7' => 'cpa', 'Cpa.g.sc166.8' => 'cpa', 'Cpa.g.sc20.111' => 'cpa', 'Cpa.g.sc27.31' => 'cpa', 'Cpa.g.sc64.36' => 'cpa', 'Cpa.g.sc64.37' => 'cpa', 'Cpa.g.sc66.49' => 'cpa', 'Cpa.g.sc80.64' => 'cpa', 'CsaV3_1G012320' => 'csa', 'CsaV3_2G008480' => 'csa', 'CsaV3_2G033450' => 'csa', 'CsaV3_3G044830' => 'csa', 'CsaV3_4G033710' => 'csa', 'CsaV3_6G051730' => 'csa', 'CsaV3_7G025350' => 'csa', 'CSS0001067' => 'camsi', 'CSS0005996' => 'camsi', 'CSS0006590' => 'camsi', 'CSS0009673' => 'camsi', 'CSS0010201' => 'camsi', 'CSS0010549' => 'camsi', 'CSS0011364' => 'camsi', 'CSS0014473' => 'camsi', 'CSS0014961' => 'camsi', 'CSS0020191' => 'camsi', 'CSS0021165' => 'camsi', 'CSS0022306' => 'camsi', 'CSS0030591' => 'camsi', 'CSS0030696' => 'camsi', 'CSS0032653' => 'camsi', 'CSS0037487' => 'camsi', 'CSS0041102' => 'camsi', 'CSS0041261' => 'camsi', 'CSS0046246' => 'camsi', 'CSS0049256' => 'camsi', 'DCAR_004075' => 'dca', 'DCAR_011538' => 'dca', 'DCAR_019553' => 'dca', 'DCAR_020952' => 'dca', 'DCAR_021739' => 'dca', 'DCAR_027407' => 'dca', 'DCAR_027913' => 'dca', 'DCAR_028066' => 'dca', 'Dinv05899' => 'din', 'Dinv07563' => 'din', 'Dinv08010' => 'din', 'Dinv14125' => 'din', 'Dinv20172' => 'din', 'Dinv30743' => 'din', 'Dinv31229' => 'din', 'Dinv34162' => 'din', 'Dinv36028' => 'din', 'Dinv39368' => 'din', 'Dinv40565' => 'din', 'Dinv41706' => 'din', 'Duzib052G0089' => 'dzi', 'Duzib116G0641' => 'dzi', 'Duzib132G0069' => 'dzi', 'Duzib132G1219' => 'dzi', 'Duzib147G0278' => 'dzi', 'Duzib160G0480' => 'dzi', 'Duzib170G0661' => 'dzi', 'Duzib177G0591' => 'dzi', 'Duzib187G1353' => 'dzi', 'Duzib192G0858' => 'dzi', 'Duzib192G0883' => 'dzi', 'Duzib213G0506' => 'dzi', 'Duzib235G0289' => 'dzi', 'Duzib251G0422' => 'dzi', 'ECA232G3898' => 'eca', 'ECA233G5950' => 'eca', 'ECA234G1699' => 'eca', 'ECA234G2421' => 'eca', 'ECA236G0426' => 'eca', 'ECA236G4331' => 'eca', 'ECA248G2573' => 'eca', 'EL10Ac1g00077' => 'bvu', 'EL10Ac1g01746' => 'bvu', 'EL10Ac2g03464' => 'bvu', 'EL10Ac4g08176' => 'bvu', 'EL10Ac7g17521' => 'bvu', 'EL10Ac8g20386' => 'bvu', 'EL10Ac9g21343' => 'bvu', 'EL10Ac9g22688' => 'bvu', 'Eucgr.B03434' => 'egr', 'Eucgr.D00618' => 'egr', 'Eucgr.E02395' => 'egr', 'Eucgr.F01129' => 'egr', 'Eucgr.F02622' => 'egr', 'Eucgr.F04207' => 'egr', 'FAN01G0570' => 'fan', 'FAN03G3351' => 'fan', 'FAN06G3702' => 'fan', 'FAN07G2149' => 'fan', 'FAN10G3758' => 'fan', 'FAN11G1170' => 'fan', 'FAN11G2050' => 'fan', 'FAN11G2724' => 'fan', 'FAN12G1700' => 'fan', 'FAN12G2028' => 'fan', 'FAN15G1160' => 'fan', 'FAN15G3063' => 'fan', 'FAN16G2540' => 'fan', 'FAN16G3077' => 'fan', 'FAN16G3624' => 'fan', 'FAN17G0221' => 'fan', 'FAN20G2492' => 'fan', 'FAN20G2905' => 'fan', 'FAN21G0548' => 'fan', 'FAN21G1300' => 'fan', 'FAN22G0077' => 'fan', 'FAN22G1315' => 'fan', 'FAN24G1280' => 'fan', 'FAN24G1445' => 'fan', 'FAN24G3527' => 'fan', 'FAN25G0464' => 'fan', 'FAN25G2885' => 'fan', 'FAN25G3270' => 'fan', 'FAN27G1101' => 'fan', 'FAN27G2846' => 'fan', 'FAN27G3524' => 'fan', 'FvH4_2g11770' => 'fve', 'FvH4_2g15630' => 'fve', 'FvH4_3g05570' => 'fve', 'FvH4_3g09110' => 'fve', 'FvH4_3g19940' => 'fve', 'FvH4_4g04821' => 'fve', 'FvH4_4g31480' => 'fve', 'FvH4_7g01740' => 'fve', 'Glyma.05G130400' => 'gma', 'Glyma.05G156400' => 'gma', 'Glyma.07G197000' => 'gma', 'Glyma.08G085151' => 'gma', 'Glyma.08G114500' => 'gma', 'Glyma.08G300400' => 'gma', 'Glyma.10G215800' => 'gma', 'Glyma.12G224400' => 'gma', 'Glyma.13G179300' => 'gma', 'Glyma.13G218151' => 'gma', 'Glyma.13G238800' => 'gma', 'Glyma.13G276900' => 'gma', 'Glyma.14G078200' => 'gma', 'Glyma.15G074500' => 'gma', 'Glyma.15G094100' => 'gma', 'Glyma.17G247200' => 'gma', 'Glyma.18G120100' => 'gma', 'Glyma.20G176000' => 'gma', 'Gohir.A01G063600' => 'ghi', 'Gohir.A01G170301' => 'ghi', 'Gohir.A02G060500' => 'ghi', 'Gohir.A05G133850' => 'ghi', 'Gohir.A05G161400' => 'ghi', 'Gohir.A06G012900' => 'ghi', 'Gohir.A06G035901' => 'ghi', 'Gohir.A06G127100' => 'ghi', 'Gohir.A06G210500' => 'ghi', 'Gohir.A08G008650' => 'ghi', 'Gohir.A09G072700' => 'ghi', 'Gohir.A09G088301' => 'ghi', 'Gohir.A10G040600' => 'ghi', 'Gohir.A12G036300' => 'ghi', 'Gohir.A12G143350' => 'ghi', 'Gohir.A12G165500' => 'ghi', 'Gohir.A13G145700' => 'ghi', 'Gohir.D01G050000' => 'ghi', 'Gohir.D01G051366' => 'ghi', 'Gohir.D01G161350' => 'ghi', 'Gohir.D02G065900' => 'ghi', 'Gohir.D05G164200' => 'ghi', 'Gohir.D05G355500' => 'ghi', 'Gohir.D06G010400' => 'ghi', 'Gohir.D06G111250' => 'ghi', 'Gohir.D06G132000' => 'ghi', 'Gohir.D06G210500' => 'ghi', 'Gohir.D07G165675' => 'ghi', 'Gohir.D08G062240' => 'ghi', 'Gohir.D08G086101' => 'ghi', 'Gohir.D08G138060' => 'ghi', 'Gohir.D09G072300' => 'ghi', 'Gohir.D10G041400' => 'ghi', 'Gohir.D11G191020' => 'ghi', 'Gohir.D11G212066' => 'ghi', 'Gohir.D12G036300' => 'ghi', 'Gohir.D12G168600' => 'ghi', 'Gohir.D13G150600' => 'ghi', 'Gorai.001G057300' => 'gra', 'Gorai.002G069900' => 'gra', 'Gorai.002G200000' => 'gra', 'Gorai.003G067600' => 'gra', 'Gorai.005G074800' => 'gra', 'Gorai.006G087300' => 'gra', 'Gorai.008G037500' => 'gra', 'Gorai.008G181400' => 'gra', 'Gorai.009G169400' => 'gra', 'Gorai.009G387900' => 'gra', 'Gorai.010G013300' => 'gra', 'Gorai.010G153800' => 'gra', 'Gorai.010G255800' => 'gra', 'Gorai.011G043700' => 'gra', 'Gorai.011G198900' => 'gra', 'Gorai.013G168400' => 'gra', 'GSVIVG01005212001' => 'vvi', 'GSVIVG01006163001' => 'vvi', 'GSVIVG01009625001' => 'vvi', 'GSVIVG01014338001' => 'vvi', 'GSVIVG01020005001' => 'vvi', 'GSVIVG01021450001' => 'vvi', 'GSVIVG01023975001' => 'vvi', 'GSVIVG01034490001' => 'vvi', 'HanXRQChr04g0112071' => 'han', 'HanXRQChr05g0131151' => 'han', 'HanXRQChr09g0262371' => 'han', 'HanXRQChr09g0268401' => 'han', 'HanXRQChr10g0279241' => 'han', 'HanXRQChr10g0297961' => 'han', 'HanXRQChr11g0326231' => 'han', 'HanXRQChr11g0328471' => 'han', 'HanXRQChr16g0507941' => 'han', 'HanXRQChr17g0560211' => 'han', 'Haze_02108' => 'cav', 'Haze_02428' => 'cav', 'Haze_05593' => 'cav', 'Haze_06448' => 'cav', 'Haze_09427' => 'cav', 'Haze_12022' => 'cav', 'Haze_17612' => 'cav', 'Haze_17928' => 'cav', 'Hma1.2p1_0032F.1_g019250' => 'hma', 'Hma1.2p1_0163F.1_g072690' => 'hma', 'Hma1.2p1_0265F.1_g106710' => 'hma', 'Hma1.2p1_0286F.1_g113970' => 'hma', 'Hma1.2p1_0363F.1_g136640' => 'hma', 'Hma1.2p1_0584F.1_g183470' => 'hma', 'Hma1.2p1_0885F.1_g232570' => 'hma', 'HPP92_006022' => 'vpl', 'HPP92_007320' => 'vpl', 'HPP92_011521' => 'vpl', 'HPP92_019387' => 'vpl', 'HPP92_024038' => 'vpl', 'Hund05891' => 'sun', 'Hund06450' => 'sun', 'Hund12053' => 'sun', 'Hund16800' => 'sun', 'Hund21222' => 'sun', 'Hund22896' => 'sun', 'Hund23746' => 'sun', 'Hund27083' => 'sun', 'Lalb_Chr02g0141831' => 'lal', 'Lalb_Chr02g0141841' => 'lal', 'Lalb_Chr05g0220411' => 'lal', 'Lalb_Chr06g0162081' => 'lal', 'Lalb_Chr09g0327651' => 'lal', 'Lalb_Chr13g0295051' => 'lal', 'Lalb_Chr15g0086801' => 'lal', 'Lalb_Chr16g0383781' => 'lal', 'Lalb_Chr16g0383791' => 'lal', 'Lalb_Chr18g0055441' => 'lal', 'Lalb_Chr18g0059611' => 'lal', 'Lalb_Chr20g0109661' => 'lal', 'Lalb_Chr20g0109831' => 'lal', 'Lalb_Chr20g0121871' => 'lal', 'Lalb_Chr22g0355361' => 'lal', 'Lalb_Chr25g0286371' => 'lal', 'Lj1A1187G43' => 'lonja', 'Lj1A1205T50' => 'lonja', 'Lj1A800G33' => 'lonja', 'Lj1C1187T7' => 'lonja', 'Lj1C843T11' => 'lonja', 'Lj1g0010940' => 'lja', 'Lj2A288T69' => 'lonja', 'Lj3g0024276' => 'lja', 'Lj4A47T76' => 'lonja', 'Lj4g0005805' => 'lja', 'Lj4g0006097' => 'lja', 'Lj4g0008528' => 'lja', 'Lj4g0024907' => 'lja', 'Lj5g0012472' => 'lja', 'Lj5g0018648' => 'lja', 'Lj6C789G1' => 'lonja', 'Lj6g0004000' => 'lja', 'Lj7A292G67' => 'lonja', 'Lj7A292T64' => 'lonja', 'Lj9A400T58' => 'lonja', 'Lsat_1_v5_gn_1_126181' => 'lsa', 'Lsat_1_v5_gn_4_123041' => 'lsa', 'Lsat_1_v5_gn_4_133620' => 'lsa', 'Lsat_1_v5_gn_4_53221' => 'lsa', 'Lsat_1_v5_gn_4_71961' => 'lsa', 'Lsat_1_v5_gn_7_105241' => 'lsa', 'Lsat_1_v5_gn_7_21361' => 'lsa', 'Lsat_1_v5_gn_7_28860' => 'lsa', 'Lsat_1_v5_gn_7_31260' => 'lsa', 'Lsat_1_v5_gn_8_52801' => 'lsa', 'Manes.02G191400' => 'mes', 'Manes.03G110100' => 'mes', 'Manes.04G071100' => 'mes', 'Manes.05G100500' => 'mes', 'Manes.05G164700' => 'mes', 'Manes.15G087000' => 'mes', 'Manes.15G121500' => 'mes', 'Manes.16G028300' => 'mes', 'Manes.17G046100' => 'mes', 'Manes.17G069800' => 'mes', 'Manes.18G100500' => 'mes', 'Mapoly0002s0109' => 'mpo', 'Mapoly0024s0007' => 'mpo', 'Mapoly0089s0032' => 'mpo', 'MBI04_g42241_MAGBIO' => 'mbi', 'MBI05_g11988_MAGBIO' => 'mbi', 'MBI05_g35452_MAGBIO' => 'mbi', 'MBI07_g30179_MAGBIO' => 'mbi', 'MBI07_g35859_MAGBIO' => 'mbi', 'MBI07_g35860_MAGBIO' => 'mbi', 'MBI07_g37166_MAGBIO' => 'mbi', 'MBI08_g18172_MAGBIO' => 'mbi', 'MBI09_g08441_MAGBIO' => 'mbi', 'MBI13_g01676_MAGBIO' => 'mbi', 'MBI14_g42955_MAGBIO' => 'mbi', 'MBI16_g13161_MAGBIO' => 'mbi', 'MBI17_g27204_MAGBIO' => 'mbi', 'MBI19_g21595_MAGBIO' => 'mbi', 'MD00G1148400' => 'mdo', 'MD02G1301200' => 'mdo', 'MD03G1227800' => 'mdo', 'MD05G1041100' => 'mdo', 'MD05G1124800' => 'mdo', 'MD05G1284000' => 'mdo', 'MD05G1338800' => 'mdo', 'MD05G1338900' => 'mdo', 'MD07G1022800' => 'mdo', 'MD10G1047500' => 'mdo', 'MD10G1127500' => 'mdo', 'MD10G1262300' => 'mdo', 'MD10G1293800' => 'mdo', 'MD16G1074300' => 'mdo', 'Medtr1g021670' => 'mtr', 'Medtr1g096320' => 'mtr', 'Medtr2g013690' => 'mtr', 'Medtr2g019450' => 'mtr', 'Medtr2g085170' => 'mtr', 'Medtr4g088785' => 'mtr', 'Medtr8g055930' => 'mtr', 'Medtr8g085850' => 'mtr', 'MELO3C002605.2' => 'cme', 'MELO3C003891.2' => 'cme', 'MELO3C004012.2' => 'cme', 'MELO3C007134.2' => 'cme', 'MELO3C008118.2' => 'cme', 'MELO3C016700.2' => 'cme', 'MELO3C024127.2' => 'cme', 'MELO3C033361.2' => 'cme', 'MELO3C033362.2' => 'cme', 'Migut.C00430' => 'egut', 'Migut.C01246' => 'egut', 'Migut.E00101' => 'egut', 'Migut.H01486' => 'egut', 'Migut.H01939' => 'egut', 'Migut.K00360' => 'egut', 'Migut.M00910' => 'egut', 'Migut.M01139' => 'egut', 'Migut.N02677' => 'egut', 'MSTRG.13252' => 'ama', 'MSTRG.14701' => 'ama', 'MSTRG.1521' => 'ama', 'MSTRG.15884' => 'ama', 'MSTRG.16242' => 'ama', 'MSTRG.22285' => 'ama', 'MSTRG.22444' => 'ama', 'MSTRG.2349' => 'ama', 'MSTRG.26308' => 'ama', 'MSTRG.28296' => 'ama', 'MSTRG.9895' => 'ama', 'Nitab4.5_0000110g0060' => 'nta', 'Nitab4.5_0000420g0130' => 'nta', 'Nitab4.5_0000422g0030' => 'nta', 'Nitab4.5_0000560g0180' => 'nta', 'Nitab4.5_0000703g0100' => 'nta', 'Nitab4.5_0000786g0200' => 'nta', 'Nitab4.5_0001336g0020' => 'nta', 'Nitab4.5_0001796g0030' => 'nta', 'Nitab4.5_0003348g0060' => 'nta', 'Nitab4.5_0003698g0040' => 'nta', 'Nitab4.5_0003942g0090' => 'nta', 'Nitab4.5_0004775g0070' => 'nta', 'Nitab4.5_0004864g0030' => 'nta', 'Nitab4.5_0005615g0020' => 'nta', 'Nitab4.5_0009288g0030' => 'nta', 'Nitab4.5_0009341g0010' => 'nta', 'Nitab4.5_0009535g0010' => 'nta', 'Nn1g03995' => 'nnu', 'Nn1g04100' => 'nnu', 'Nn1g06530' => 'nnu', 'Nn3g16404' => 'nnu', 'Nn3g17212' => 'nnu', 'Nn3g20776' => 'nnu', 'Nn3g21923' => 'nnu', 'Nn5g27737' => 'nnu', 'Nn5g29461' => 'nnu', 'Nn7g38355' => 'nnu', 'Nn8g39873' => 'nnu', 'Oeu000548.2' => 'oeu', 'Oeu004672.1' => 'oeu', 'Oeu015605.2' => 'oeu', 'Oeu016092.1' => 'oeu', 'Oeu017879.3' => 'oeu', 'Oeu024910.1' => 'oeu', 'Oeu028965.1' => 'oeu', 'Oeu031269.1' => 'oeu', 'Oeu031270.1' => 'oeu', 'Oeu032535.1' => 'oeu', 'Oeu034151.1' => 'oeu', 'Oeu034152.1' => 'oeu', 'Oeu034588.2' => 'oeu', 'Oeu050846.1' => 'oeu', 'Oeu050849.2' => 'oeu', 'Oeu051063.2' => 'oeu', 'Oeu052368.1' => 'oeu', 'Oeu052370.1' => 'oeu', 'Os01g0210400' => 'osa', 'Os01g0304300' => 'osa', 'Os01g0749100' => 'osa', 'Os02g0745800' => 'osa', 'Os03g0769050' => 'osa', 'Os05g0531500' => 'osa', 'Os06g0724300' => 'osa', 'Os11g0198100' => 'osa', 'Peaxi162Scf00069g01425' => 'pax', 'Peaxi162Scf00280g00811' => 'pax', 'Peaxi162Scf00310g00615' => 'pax', 'Peaxi162Scf00362g00542' => 'pax', 'Peaxi162Scf00461g00310' => 'pax', 'Peaxi162Scf00530g00118' => 'pax', 'Peaxi162Scf00541g00057' => 'pax', 'Peaxi162Scf00661g00017' => 'pax', 'Peaxi162Scf00926g00027' => 'pax', 'Peaxi162Scf01064g00263' => 'pax', 'Peaxi162Scf01211g00135' => 'pax', 'PGR004G2336' => 'pgr', 'PGR042G0327' => 'pgr', 'PGR042G1957' => 'pgr', 'PGR042G2003' => 'pgr', 'PGR042G3929' => 'pgr', 'PGR083G1137' => 'pgr', 'PGR083G1364' => 'pgr', 'PGSC0003DMG400003381' => 'stu', 'PGSC0003DMG400003417' => 'stu', 'PGSC0003DMG400008981' => 'stu', 'PGSC0003DMG400012417' => 'stu', 'PGSC0003DMG400012823' => 'stu', 'PGSC0003DMG400016885' => 'stu', 'PGSC0003DMG400022812' => 'stu', 'PGSC0003DMG400029726' => 'stu', 'PGSC0003DMG401009243' => 'stu', 'PGSC0003DMG401031505' => 'stu', 'PGSC0003DMG402031505' => 'stu', 'Phvul.001G017600' => 'pvu', 'Phvul.002G193500' => 'pvu', 'Phvul.002G228900' => 'pvu', 'Phvul.002G236800' => 'pvu', 'Phvul.003G049500' => 'pvu', 'Phvul.005G072000' => 'pvu', 'Phvul.006G164800' => 'pvu', 'Phvul.006G185100' => 'pvu', 'Phvul.007G090000' => 'pvu', 'Potri.001G399800' => 'ptr', 'Potri.002G149900' => 'ptr', 'Potri.004G044100' => 'ptr', 'Potri.004G177600' => 'ptr', 'Potri.009G138000' => 'ptr', 'Potri.010G094000' => 'ptr', 'Potri.011G053000' => 'ptr', 'Potri.011G119300' => 'ptr', 'Potri.013G113700' => 'ptr', 'Potri.018G107800' => 'ptr', 'Potri.019G084100' => 'ptr', 'Pp3c14_23720' => 'ppa', 'Pp3c16_6340' => 'ppa', 'Pp3c23_13420' => 'ppa', 'Pp3c24_2740' => 'ppa', 'Pp3c25_860' => 'ppa', 'Pp3c8_21750' => 'ppa', 'Prupe.1G273000' => 'ppe', 'Prupe.1G273700' => 'ppe', 'Prupe.1G274100' => 'ppe', 'Prupe.2G023300' => 'ppe', 'Prupe.4G048000' => 'ppe', 'Prupe.4G080400' => 'ppe', 'Prupe.4G181200' => 'ppe', 'Prupe.8G056900' => 'ppe', 'Prupe.8G168700' => 'ppe', 'Psat1g189080' => 'psa', 'Psat1g204760' => 'psa', 'Psat4g175560' => 'psa', 'Psat4g177720' => 'psa', 'Psat5g244240' => 'psa', 'Psat6g010720' => 'psa', 'Psat6g187200' => 'psa', 'Psat7g072040' => 'psa', 'PSO017G3501' => 'pso', 'PSO063G2148' => 'pso', 'PSO063G5608' => 'pso', 'PSO210G6392' => 'pso', 'PSO541G2319' => 'pso', 'PSO541G2836' => 'pso', 'PSO541G4012' => 'pso', 'PSO541G6253' => 'pso', 'PSO675G0580' => 'pso', 'PSO675G0856' => 'pso', 'PSO675G5635' => 'pso', 'PSO675G9157' => 'pso', 'PSO832G1660' => 'pso', 'PSO832G1969' => 'pso', 'QL02p007186' => 'qlo', 'QL02p033904' => 'qlo', 'QL03p064391' => 'qlo', 'QL05p040593' => 'qlo', 'QL05p058242' => 'qlo', 'QL08p021825' => 'qlo', 'QL11p004981' => 'qlo', 'RcHm_v2.0_Chr1g0318301' => 'rch', 'RcHm_v2.0_Chr4g0418501' => 'rch', 'RcHm_v2.0_Chr4g0439971' => 'rch', 'RcHm_v2.0_Chr5g0008541' => 'rch', 'RcHm_v2.0_Chr5g0014101' => 'rch', 'RcHm_v2.0_Chr5g0014131' => 'rch', 'RcHm_v2.0_Chr5g0033621' => 'rch', 'RcHm_v2.0_Chr6g0272041' => 'rch', 'RcHm_v2.0_Chr6g0278831' => 'rch', 'Rhsim02G0130400' => 'rsi', 'Rhsim02G0171100' => 'rsi', 'Rhsim05G0053000' => 'rsi', 'Rhsim05G0053100' => 'rsi', 'Rhsim06G0096500' => 'rsi', 'Rhsim06G0096600' => 'rsi', 'Rhsim06G0199100' => 'rsi', 'Rhsim12G0062300' => 'rsi', 'Rhsim12G0062800' => 'rsi', 'Sabra02G0118600' => 'sbr', 'Sabra04G0027300' => 'sbr', 'Sabra04G0119500' => 'sbr', 'Sabra08G0112500' => 'sbr', 'Sabra11G0036800' => 'sbr', 'Sabra11G0103800' => 'sbr', 'Sabra13G0096300' => 'sbr', 'Sabra16G0262300' => 'sbr', 'Sabra18G0091700' => 'sbr', 'Sabra19G0095400' => 'sbr', 'SalBow6G3080' => 'sbo', 'SalBow7G1157' => 'sbo', 'SalBow7G2123' => 'sbo', 'SalBow7G2285' => 'sbo', 'SalBow7G3537' => 'sbo', 'SalBow8G2947' => 'sbo', 'SalBow8G4463' => 'sbo', 'SalBow8G5466' => 'sbo', 'Sc01g0001750' => 'sci', 'Sc02g0006640' => 'sci', 'Sc02g0006670' => 'sci', 'Sc04g0008220' => 'sci', 'Sc05g0006190' => 'sci', 'Sc08g0002760' => 'sci', 'Sc17g0006170' => 'sci', 'Sc22g0002050' => 'sci', 'Sc23g0001190' => 'sci', 'Sc24g0000980' => 'sci', 'Sed0006245' => 'sed', 'Sed0007543' => 'sed', 'Sed0009411' => 'sed', 'Sed0010765' => 'sed', 'Sed0012944' => 'sed', 'Sed0014682' => 'sed', 'Sed0016174' => 'sed', 'Sed0016796' => 'sed', 'Sed0020317' => 'sed', 'Sed0021467' => 'sed', 'SEGI_01316' => 'sgi', 'SEGI_03374' => 'sgi', 'SEGI_16265' => 'sgi', 'SEGI_18569' => 'sgi', 'SEGI_20351' => 'sgi', 'SEGI_26395' => 'sgi', 'SEGI_29469' => 'sgi', 'SEGI_34771' => 'sgi', 'SEGI_36769' => 'sgi', 'SEGI_37139' => 'sgi', 'SGA_v2.0_scaffold100G29687' => 'sas', 'SGA_v2.0_scaffold118G32472' => 'sas', 'SGA_v2.0_scaffold14G07051' => 'sas', 'SGA_v2.0_scaffold183G39845' => 'sas', 'SGA_v2.0_scaffold1G00174' => 'sas', 'SGA_v2.0_scaffold22G09714' => 'sas', 'SGA_v2.0_scaffold333G48992' => 'sas', 'SGA_v2.0_scaffold46G17491' => 'sas', 'SGA_v2.0_scaffold49G18294' => 'sas', 'SGA_v2.0_scaffold63G21658' => 'sas', 'SHI01741' => 'shi', 'SHI05771' => 'shi', 'SHI18077' => 'shi', 'SHI20525' => 'shi', 'SHI20527' => 'shi', 'SHI20528' => 'shi', 'SMO172G0185' => 'smo', 'SMO198G0020' => 'smo', 'SMO351G0006' => 'smo', 'SMO356G0118' => 'smo', 'SMO358G0296' => 'smo', 'SMO367G0079' => 'smo', 'SMO367G1277' => 'smo', 'Solyc01g014220.3' => 'sly', 'Solyc01g111770.2' => 'sly', 'Solyc02g078180.3' => 'sly', 'Solyc03g006430.3' => 'sly', 'Solyc03g006456.1' => 'sly', 'Solyc03g079860.2' => 'sly', 'Solyc04g079770.3' => 'sly', 'Solyc05g007430.4' => 'sly', 'Solyc07g063150.3' => 'sly', 'Solyc08g016620.3' => 'sly', 'Solyc09g057590.3' => 'sly', 'Solyc09g057600.1' => 'sly', 'Solyc10g009050.3' => 'sly', 'Solyc11g017420.2' => 'sly', 'Sopen01g053810' => 'spe', 'Sopen02g023040' => 'spe', 'Sopen03g002440' => 'spe', 'Sopen04g033350' => 'spe', 'Sopen05g003310' => 'spe', 'Sopen07g004050' => 'spe', 'Sopen07g031340' => 'spe', 'Sopen08g006990' => 'spe', 'Sopen10g004830' => 'spe', 'Sopen11g009370' => 'spe', 'Sp1g24450' => 'spa', 'Sp1g29670' => 'spa', 'Sp1g39600' => 'spa', 'Sp2g11080' => 'spa', 'Sp2g13970' => 'spa', 'Sp4g16130' => 'spa', 'Sp6g13080' => 'spa', 'Sp7g37270' => 'spa', 'TAR371G0065' => 'tar', 'TAR376G0340' => 'tar', 'TAR376G0435' => 'tar', 'TAR381G0002' => 'tar', 'TAR381G1236' => 'tar', 'TAR624G0055' => 'tar', 'TAR624G0324' => 'tar', 'TAR624G0696' => 'tar', 'TAR624G0906' => 'tar', 'TAR625G0107' => 'tar', 'TAR626G0015' => 'tar', 'TAR626G1356' => 'tar', 'TAR627G0888' => 'tar', 'TAR628G0399' => 'tar', 'TAR628G1327' => 'tar', 'TAR629G2831' => 'tar', 'TAR629G2874' => 'tar', 'TAR633G1432' => 'tar', 'TAR633G2771' => 'tar', 'THA.LOC104803394' => 'tha', 'THA.LOC104805153' => 'tha', 'THA.LOC104806784' => 'tha', 'THA.LOC104810473' => 'tha', 'THA.LOC104813100' => 'tha', 'THA.LOC104814215' => 'tha', 'THA.LOC104815554' => 'tha', 'THA.LOC104820544' => 'tha', 'THA.LOC104824754' => 'tha', 'THA.LOC104827717' => 'tha', 'Thecc.02G031400' => 'tca', 'Thecc.02G055900' => 'tca', 'Thecc.02G350800' => 'tca', 'Thecc.06G150900' => 'tca', 'Thecc.06G186600' => 'tca', 'Thecc.07G089600' => 'tca', 'Thecc.08G020400' => 'tca', 'Thecc.08G182100' => 'tca', 'Thhalv10000873m.g' => 'esa', 'Thhalv10004185m.g' => 'esa', 'Thhalv10006981m.g' => 'esa', 'Thhalv10007204m.g' => 'esa', 'Thhalv10011374m.g' => 'esa', 'Thhalv10013482m.g' => 'esa', 'Thhalv10017801m.g' => 'esa', 'Thhalv10024983m.g' => 'esa', 'TPR.G12072' => 'tpr', 'TPR.G15769' => 'tpr', 'TPR.G16504' => 'tpr', 'TPR.G16506' => 'tpr', 'TPR.G24345' => 'tpr', 'TPR.G26666' => 'tpr', 'TPR.G27320' => 'tpr', 'TPR.G31819' => 'tpr', 'TPR.G38879' => 'tpr', 'TPR.G39015' => 'tpr', 'TPR.G8819' => 'tpr', 'TWI09G0924' => 'twi', 'TWI12G0811' => 'twi', 'TWI12G1294' => 'twi', 'TWI31G0150' => 'twi', 'TWI36G1262' => 'twi', 'TWI38G1287' => 'twi', 'TWI38G1633' => 'twi', 'TWI38G1982' => 'twi', 'TWI39G0116' => 'twi', 'TWI60G1011' => 'twi', 'TWI63G0171' => 'twi', 'TWI73G0839' => 'twi', 'TWI79G1511' => 'twi', 'unitig_0.g915' => 'ugi', 'unitig_0.g916' => 'ugi', 'unitig_21.g20219' => 'ugi', 'unitig_21.g20416' => 'ugi', 'unitig_578.g16132' => 'ugi', 'unitig_578.g16718' => 'ugi', 'unitig_62.g23481' => 'ugi', 'unitig_744.g24535' => 'ugi', 'unitig_749.g13525' => 'ugi', 'vmacro01248' => 'vma', 'vmacro02290' => 'vma', 'vmacro10946' => 'vma', 'vmacro11865' => 'vma', 'vmacro12493' => 'vma', 'vmacro17322' => 'vma', 'vmacro21599' => 'vma', 'vmacro23041' => 'vma', 'VMungo0251G0004' => 'vmu', 'VMungo0251G2639' => 'vmu', 'VMungo0251G2967' => 'vmu', 'VMungo0540G0864' => 'vmu', 'VMungo0540G1569' => 'vmu', 'VMungo0647G0317' => 'vmu', 'VMungo0720G1373' => 'vmu', 'VMungo0720G1508' => 'vmu', 'VMungo1080G0485' => 'vmu', 'VMungo1215G3177' => 'vmu', 'Zm00001eb112600' => 'zma', 'Zm00001eb120220' => 'zma', 'Zm00001eb153240' => 'zma', 'Zm00001eb168880' => 'zma', 'Zm00001eb213920' => 'zma', 'Zm00001eb228280' => 'zma', 'Zm00001eb254580' => 'zma', 'Zm00001eb272180' => 'zma', 'Zm00001eb293190' => 'zma', 'Zm00001eb322930' => 'zma', 'Zm00001eb353360' => 'zma', 'Zm00001eb353390' => 'zma', 'Zm00001eb353430' => 'zma', 'Zm00001eb353440' => 'zma', 'Zm00001eb353780' => 'zma' ) $gf_id = 'HOM05D000499' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000499' ) $data_identifier = 'HOM05D000499' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 29, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 12, 'amhyb' => (int) 8, 'aly' => (int) 12, 'aox' => (int) 9, 'arhy' => (int) 26, 'ath' => (int) 8, 'atr' => (int) 7, 'acertr' => (int) 10, 'cqu' => (int) 15, 'bca' => (int) 29, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 11, 'cansat' => (int) 8, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 9, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 8, 'cpa' => (int) 10, 'csa' => (int) 7, 'camsi' => (int) 20, 'dca' => (int) 8, 'din' => (int) 12, 'dzi' => (int) 14, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 6, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 38, 'gra' => (int) 16, 'vvi' => (int) 8, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 5, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 11, 'lja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 11, 'mpo' => (int) 3, 'mbi' => (int) 14, 'mdo' => (int) 14, 'mtr' => (int) 8, 'cme' => (int) 9, 'egut' => (int) 9, 'ama' => (int) 11, 'nta' => (int) 17, 'nnu' => (int) 11, 'oeu' => (int) 18, 'osa' => (int) 8, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 6, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 9, 'rsi' => (int) 9, 'sbr' => (int) 10, 'sbo' => (int) 8, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 10, 'sas' => (int) 10, 'shi' => (int) 6, 'smo' => (int) 7, 'sly' => (int) 14, 'spe' => (int) 10, 'spa' => (int) 8, 'tar' => (int) 19, 'tha' => (int) 10, 'tca' => (int) 8, 'esa' => (int) 8, 'tpr' => (int) 11, 'twi' => (int) 13, 'ugi' => (int) 9, 'vma' => (int) 8, 'vmu' => (int) 10, 'zma' => (int) 15 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb353780' $species_info = array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ) $local_species = 'ghi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000499', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1066', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p29780' => 'bna', 'A02p33180' => 'bna', 'A03p16470' => 'bna', 'A03p66010' => 'bna', 'A04p25970' => 'bna', 'A06p01270' => 'bna', 'A06p46080' => 'bna', 'A07p11400' => 'bna', 'A08p01840' => 'bna', 'A08p08230' => 'bna', 'A08p25740' => 'bna', 'A09p32070' => 'bna', 'A09p37830' => 'bna', 'A09p42840' => 'bna', 'A09p42850' => 'bna', 'Aa31LG10G2060' => 'aar', 'Aa31LG2G7410' => 'aar', 'Aa31LG6G10200' => 'aar', 'Aa31LG6G16680' => 'aar', 'Aa31LG6G8470' => 'aar', 'Aa31LG9G12730' => 'aar', 'Aa31LG9G13680' => 'aar', 'Aa31LG9G14920' => 'aar', 'Aa31LG9G6650' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4977' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5467' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3254' => 'aag', 'Actinidia02578' => 'ach', 'Actinidia07693' => 'ach', 'Actinidia08413' => 'ach', 'Actinidia08414' => 'ach', 'Actinidia15289' => 'ach', 'Actinidia19871' => 'ach', 'Actinidia21475' => 'ach', 'Actinidia22576' => 'ach', 'Actinidia28327' => 'ach', 'Actinidia32491' => 'ach', 'Actinidia39463' => 'ach', 'Actinidia39571' => 'ach', 'Ah.01g013750' => 'amhyb', 'Ah.01g023210' => 'amhyb', 'Ah.04g164850' => 'amhyb', 'Ah.05g178060' => 'amhyb', 'Ah.07g204270' => 'amhyb', 'Ah.07g208480' => 'amhyb', 'Ah.09g237410' => 'amhyb', 'Ah.14g089460' => 'amhyb', 'AL1G41790' => 'aly', 'AL1G49050' => 'aly', 'AL1G53810' => 'aly', 'AL1G61400' => 'aly', 'AL4G18580' => 'aly', 'AL5G12510' => 'aly', 'AL5G12540' => 'aly', 'AL6G43230' => 'aly', 'AL7G10370' => 'aly', 'AL7G19250' => 'aly', 'AL8G12240' => 'aly', 'AL8G18540' => 'aly', 'Aqoxy1G02409' => 'aox', 'Aqoxy2G03993' => 'aox', 'Aqoxy3G03357' => 'aox', 'Aqoxy4G00785' => 'aox', 'Aqoxy5G02598' => 'aox', 'Aqoxy6G00132' => 'aox', 'Aqoxy7G01776' => 'aox', 'Aqoxy7G02316' => 'aox', 'Aqoxy7G03973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.12AFKW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B8730' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27IQR1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3F75VG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3RE0GA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41TCQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.527VTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FIR39' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5W8UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DA38EV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ63HS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H1I32C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HC27T5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4M8AP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7N3CZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9UVDZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LS1NQA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT1D4B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SKC4TM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCFV76' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF9Q1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQWD9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1ZM88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WE07RT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YCK7VH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJE6Q6' => 'arhy', 'AT1G28240' => 'ath', 'AT1G34550' => 'ath', 'AT1G53040' => 'ath', 'AT2G02910' => 'ath', 'AT4G09630' => 'ath', 'AT4G38500' => 'ath', 'AT5G42660' => 'ath', 'AT5G46220' => 'ath', 'ATR0152G026' => 'atr', 'ATR0564G343' => 'atr', 'ATR0706G151' => 'atr', 'ATR0733G207' => 'atr', 'ATR0751G234' => 'atr', 'ATR0807G048' => 'atr', 'ATR1091G084' => 'atr', 'Atru.chr10.1229' => 'acertr', 'Atru.chr10.1230' => 'acertr', 'Atru.chr10.1874' => 'acertr', 'Atru.chr11.1808' => 'acertr', 'Atru.chr13.1795' => 'acertr', 'Atru.chr13.570' => 'acertr', 'Atru.chr2.2608' => 'acertr', 'Atru.chr2.2609' => 'acertr', 'Atru.chr5.3428' => 'acertr', 'Atru.chr8.1171' => 'acertr', 'AUR62004651' => 'cqu', 'AUR62008675' => 'cqu', 'AUR62010014' => 'cqu', 'AUR62013004' => 'cqu', 'AUR62014825' => 'cqu', 'AUR62015015' => 'cqu', 'AUR62015151' => 'cqu', 'AUR62017020' => 'cqu', 'AUR62019422' => 'cqu', 'AUR62023570' => 'cqu', 'AUR62025571' => 'cqu', 'AUR62029098' => 'cqu', 'AUR62033863' => 'cqu', 'AUR62034296' => 'cqu', 'AUR62040075' => 'cqu', 'BcaB02g07334' => 'bca', 'BcaB02g10575' => 'bca', 'BcaB03g12119' => 'bca', 'BcaB03g12120' => 'bca', 'BcaB03g13945' => 'bca', 'BcaB04g17123' => 'bca', 'BcaB04g17867' => 'bca', 'BcaB04g19839' => 'bca', 'BcaB07g30317' => 'bca', 'BcaB07g32432' => 'bca', 'BcaB07g33362' => 'bca', 'BcaB08g36611' => 'bca', 'BcaC01g00028' => 'bca', 'BcaC01g01356' => 'bca', 'BcaC01g02034' => 'bca', 'BcaC01g06051' => 'bca', 'BcaC03g16839' => 'bca', 'BcaC03g17176' => 'bca', 'BcaC05g26829' => 'bca', 'BcaC06g31490' => 'bca', 'BcaC06g35344' => 'bca', 'BcaC06g36570' => 'bca', 'BcaC07g37537' => 'bca', 'BcaC08g43491' => 'bca', 'BcaC08g43773' => 'bca', 'BcaNung00234' => 'bca', 'BcaNung01982' => 'bca', 'BcaNung03707' => 'bca', 'BcaNung06454' => 'bca', 'BolC2t10762H' => 'bol', 'BolC2t11191H' => 'bol', 'BolC3t14322H' => 'bol', 'BolC3t19747H' => 'bol', 'BolC3t21425H' => 'bol', 'BolC4t27800H' => 'bol', 'BolC5t31423H' => 'bol', 'BolC6t35951H' => 'bol', 'BolC6t36282H' => 'bol', 'BolC7t40678H' => 'bol', 'BolC7t40679H' => 'bol', 'BolC7t42222H' => 'bol', 'BolC7t43492H' => 'bol', 'BolC7t46785H' => 'bol', 'BolC8t47853H' => 'bol', 'BolC9t56805H' => 'bol', 'BraA02t08000Z' => 'bra', 'BraA02t08341Z' => 'bra', 'BraA03t10936Z' => 'bra', 'BraA03t15657Z' => 'bra', 'BraA04t18100Z' => 'bra', 'BraA05t20523Z' => 'bra', 'BraA06t23353Z' => 'bra', 'BraA06t27473Z' => 'bra', 'BraA06t27769Z' => 'bra', 'BraA07t28928Z' => 'bra', 'BraA08t32236Z' => 'bra', 'BraA08t32841Z' => 'bra', 'BraA08t34524Z' => 'bra', 'BraA09t38742Z' => 'bra', 'BraA09t39295Z' => 'bra', 'C02p47180' => 'bna', 'C02p50990' => 'bna', 'C03p19360' => 'bna', 'C03p74950' => 'bna', 'C03p91000' => 'bna', 'C04p63260' => 'bna', 'C05p27050' => 'bna', 'C06p08750' => 'bna', 'C06p11490' => 'bna', 'C07p02820' => 'bna', 'C07p17180' => 'bna', 'C07p29440' => 'bna', 'C07p63730' => 'bna', 'C09p39260' => 'bna', 'CAN.G1164.34' => 'can', 'CAN.G1164.39' => 'can', 'CAN.G1530.3' => 'can', 'CAN.G162.61' => 'can', 'CAN.G176.6' => 'can', 'CAN.G289.49' => 'can', 'CAN.G370.21' => 'can', 'CAN.G370.22' => 'can', 'CAN.G371.117' => 'can', 'CAN.G58.37' => 'can', 'CAN.G588.98' => 'can', 'CANSAT21G2266' => 'cansat', 'CANSAT25G2799' => 'cansat', 'CANSAT35G0862' => 'cansat', 'CANSAT35G1704' => 'cansat', 'CANSAT35G1760' => 'cansat', 'CANSAT56G3971' => 'cansat', 'CANSAT56G4116' => 'cansat', 'CANSAT80G1259' => 'cansat', 'CARHR027730' => 'chi', 'CARHR033880' => 'chi', 'CARHR043270' => 'chi', 'CARHR145330' => 'chi', 'CARHR145340' => 'chi', 'CARHR175570' => 'chi', 'CARHR181570' => 'chi', 'CARHR258470' => 'chi', 'CARHR260490' => 'chi', 'CARHR294220' => 'chi', 'Carub.0001s2668' => 'cru', 'Carub.0001s3257' => 'cru', 'Carub.0001s4220' => 'cru', 'Carub.0005s0179' => 'cru', 'Carub.0006s2807' => 'cru', 'Carub.0007s0039' => 'cru', 'Carub.0008s0169' => 'cru', 'Carub.0008s0636' => 'cru', 'Ca_00338_v3' => 'car', 'Ca_00542_v3' => 'car', 'Ca_01844_v3' => 'car', 'Ca_10611_v3' => 'car', 'Ca_13326_v3' => 'car', 'Ca_17944_v3' => 'car', 'Ca_18546_v3' => 'car', 'Ca_24219_v3' => 'car', 'Ca_29972_v3' => 'car', 'CBR_g3681' => 'cbr', 'CBR_g40021' => 'cbr', 'Cc01_g08140' => 'ccan', 'Cc02_g13410' => 'ccan', 'Cc02_g37480' => 'ccan', 'Cc05_g12030' => 'ccan', 'Cc09_g03370' => 'ccan', 'Cc09_g10300' => 'ccan', 'Cc10_g03530' => 'ccan', 'Cc10_g11380' => 'ccan', 'CDE01G0176' => 'cde', 'CDE02G0675' => 'cde', 'CDE02G0942' => 'cde', 'CDE02G1153' => 'cde', 'CDE02G4177' => 'cde', 'CDE04G2117' => 'cde', 'CDE04G2736' => 'cde', 'CDE08G1161' => 'cde', 'CDE09G1238' => 'cde', 'Cfa000467' => 'cfa', 'Cfa000947' => 'cfa', 'Cfa004969' => 'cfa', 'Cfa005284' => 'cfa', 'Cfa008993' => 'cfa', 'Cfa018187' => 'cfa', 'Cfa018454' => 'cfa', 'Cfa020585' => 'cfa', 'Ciclev10000424m.g' => 'ccl', 'Ciclev10003605m.g' => 'ccl', 'Ciclev10007828m.g' => 'ccl', 'Ciclev10014620m.g' => 'ccl', 'Ciclev10015169m.g' => 'ccl', 'Ciclev10018291m.g' => 'ccl', 'Ciclev10028256m.g' => 'ccl', 'Ciclev10033822m.g' => 'ccl', 'CiPaw.05G060300' => 'cil', 'CiPaw.05G085000' => 'cil', 'CiPaw.06G083700' => 'cil', 'CiPaw.06G120300' => 'cil', 'CiPaw.09G060500' => 'cil', 'CiPaw.09G123800' => 'cil', 'CiPaw.11G169700' => 'cil', 'CiPaw.12G118300' => 'cil', 'CiPaw.15G071000' => 'cil', 'CiPaw.15G081900' => 'cil', 'ClCG01G024610' => 'cla', 'ClCG03G006070' => 'cla', 'ClCG05G019250' => 'cla', 'ClCG09G009500' => 'cla', 'ClCG11G008200' => 'cla', 'ClCG11G018080' => 'cla', 'COL.COLO4_17373' => 'col', 'COL.COLO4_22994' => 'col', 'COL.COLO4_26389' => 'col', 'COL.COLO4_27170' => 'col', 'COL.COLO4_31074' => 'col', 'COL.COLO4_31465' => 'col', 'COL.COLO4_36438' => 'col', 'COL.COLO4_36439' => 'col', 'Cpa.g.c38781' => 'cpa', 'Cpa.g.sc128.12' => 'cpa', 'Cpa.g.sc166.7' => 'cpa', 'Cpa.g.sc166.8' => 'cpa', 'Cpa.g.sc20.111' => 'cpa', 'Cpa.g.sc27.31' => 'cpa', 'Cpa.g.sc64.36' => 'cpa', 'Cpa.g.sc64.37' => 'cpa', 'Cpa.g.sc66.49' => 'cpa', 'Cpa.g.sc80.64' => 'cpa', 'CsaV3_1G012320' => 'csa', 'CsaV3_2G008480' => 'csa', 'CsaV3_2G033450' => 'csa', 'CsaV3_3G044830' => 'csa', 'CsaV3_4G033710' => 'csa', 'CsaV3_6G051730' => 'csa', 'CsaV3_7G025350' => 'csa', 'CSS0001067' => 'camsi', 'CSS0005996' => 'camsi', 'CSS0006590' => 'camsi', 'CSS0009673' => 'camsi', 'CSS0010201' => 'camsi', 'CSS0010549' => 'camsi', 'CSS0011364' => 'camsi', 'CSS0014473' => 'camsi', 'CSS0014961' => 'camsi', 'CSS0020191' => 'camsi', 'CSS0021165' => 'camsi', 'CSS0022306' => 'camsi', 'CSS0030591' => 'camsi', 'CSS0030696' => 'camsi', 'CSS0032653' => 'camsi', 'CSS0037487' => 'camsi', 'CSS0041102' => 'camsi', 'CSS0041261' => 'camsi', 'CSS0046246' => 'camsi', 'CSS0049256' => 'camsi', 'DCAR_004075' => 'dca', 'DCAR_011538' => 'dca', 'DCAR_019553' => 'dca', 'DCAR_020952' => 'dca', 'DCAR_021739' => 'dca', 'DCAR_027407' => 'dca', 'DCAR_027913' => 'dca', 'DCAR_028066' => 'dca', 'Dinv05899' => 'din', 'Dinv07563' => 'din', 'Dinv08010' => 'din', 'Dinv14125' => 'din', 'Dinv20172' => 'din', 'Dinv30743' => 'din', 'Dinv31229' => 'din', 'Dinv34162' => 'din', 'Dinv36028' => 'din', 'Dinv39368' => 'din', 'Dinv40565' => 'din', 'Dinv41706' => 'din', 'Duzib052G0089' => 'dzi', 'Duzib116G0641' => 'dzi', 'Duzib132G0069' => 'dzi', 'Duzib132G1219' => 'dzi', 'Duzib147G0278' => 'dzi', 'Duzib160G0480' => 'dzi', 'Duzib170G0661' => 'dzi', 'Duzib177G0591' => 'dzi', 'Duzib187G1353' => 'dzi', 'Duzib192G0858' => 'dzi', 'Duzib192G0883' => 'dzi', 'Duzib213G0506' => 'dzi', 'Duzib235G0289' => 'dzi', 'Duzib251G0422' => 'dzi', 'ECA232G3898' => 'eca', 'ECA233G5950' => 'eca', 'ECA234G1699' => 'eca', 'ECA234G2421' => 'eca', 'ECA236G0426' => 'eca', 'ECA236G4331' => 'eca', 'ECA248G2573' => 'eca', 'EL10Ac1g00077' => 'bvu', 'EL10Ac1g01746' => 'bvu', 'EL10Ac2g03464' => 'bvu', 'EL10Ac4g08176' => 'bvu', 'EL10Ac7g17521' => 'bvu', 'EL10Ac8g20386' => 'bvu', 'EL10Ac9g21343' => 'bvu', 'EL10Ac9g22688' => 'bvu', 'Eucgr.B03434' => 'egr', 'Eucgr.D00618' => 'egr', 'Eucgr.E02395' => 'egr', 'Eucgr.F01129' => 'egr', 'Eucgr.F02622' => 'egr', 'Eucgr.F04207' => 'egr', 'FAN01G0570' => 'fan', 'FAN03G3351' => 'fan', 'FAN06G3702' => 'fan', 'FAN07G2149' => 'fan', 'FAN10G3758' => 'fan', 'FAN11G1170' => 'fan', 'FAN11G2050' => 'fan', 'FAN11G2724' => 'fan', 'FAN12G1700' => 'fan', 'FAN12G2028' => 'fan', 'FAN15G1160' => 'fan', 'FAN15G3063' => 'fan', 'FAN16G2540' => 'fan', 'FAN16G3077' => 'fan', 'FAN16G3624' => 'fan', 'FAN17G0221' => 'fan', 'FAN20G2492' => 'fan', 'FAN20G2905' => 'fan', 'FAN21G0548' => 'fan', 'FAN21G1300' => 'fan', 'FAN22G0077' => 'fan', 'FAN22G1315' => 'fan', 'FAN24G1280' => 'fan', 'FAN24G1445' => 'fan', 'FAN24G3527' => 'fan', 'FAN25G0464' => 'fan', 'FAN25G2885' => 'fan', 'FAN25G3270' => 'fan', 'FAN27G1101' => 'fan', 'FAN27G2846' => 'fan', 'FAN27G3524' => 'fan', 'FvH4_2g11770' => 'fve', 'FvH4_2g15630' => 'fve', 'FvH4_3g05570' => 'fve', 'FvH4_3g09110' => 'fve', 'FvH4_3g19940' => 'fve', 'FvH4_4g04821' => 'fve', 'FvH4_4g31480' => 'fve', 'FvH4_7g01740' => 'fve', 'Glyma.05G130400' => 'gma', 'Glyma.05G156400' => 'gma', 'Glyma.07G197000' => 'gma', 'Glyma.08G085151' => 'gma', 'Glyma.08G114500' => 'gma', 'Glyma.08G300400' => 'gma', 'Glyma.10G215800' => 'gma', 'Glyma.12G224400' => 'gma', 'Glyma.13G179300' => 'gma', 'Glyma.13G218151' => 'gma', 'Glyma.13G238800' => 'gma', 'Glyma.13G276900' => 'gma', 'Glyma.14G078200' => 'gma', 'Glyma.15G074500' => 'gma', 'Glyma.15G094100' => 'gma', 'Glyma.17G247200' => 'gma', 'Glyma.18G120100' => 'gma', 'Glyma.20G176000' => 'gma', 'Gohir.A01G063600' => 'ghi', 'Gohir.A01G170301' => 'ghi', 'Gohir.A02G060500' => 'ghi', 'Gohir.A05G133850' => 'ghi', 'Gohir.A05G161400' => 'ghi', 'Gohir.A06G012900' => 'ghi', 'Gohir.A06G035901' => 'ghi', 'Gohir.A06G127100' => 'ghi', 'Gohir.A06G210500' => 'ghi', 'Gohir.A08G008650' => 'ghi', 'Gohir.A09G072700' => 'ghi', 'Gohir.A09G088301' => 'ghi', 'Gohir.A10G040600' => 'ghi', 'Gohir.A12G036300' => 'ghi', 'Gohir.A12G143350' => 'ghi', 'Gohir.A12G165500' => 'ghi', 'Gohir.A13G145700' => 'ghi', 'Gohir.D01G050000' => 'ghi', 'Gohir.D01G051366' => 'ghi', 'Gohir.D01G161350' => 'ghi', 'Gohir.D02G065900' => 'ghi', 'Gohir.D05G164200' => 'ghi', 'Gohir.D05G355500' => 'ghi', 'Gohir.D06G010400' => 'ghi', 'Gohir.D06G111250' => 'ghi', 'Gohir.D06G132000' => 'ghi', 'Gohir.D06G210500' => 'ghi', 'Gohir.D07G165675' => 'ghi', 'Gohir.D08G062240' => 'ghi', 'Gohir.D08G086101' => 'ghi', 'Gohir.D08G138060' => 'ghi', 'Gohir.D09G072300' => 'ghi', 'Gohir.D10G041400' => 'ghi', 'Gohir.D11G191020' => 'ghi', 'Gohir.D11G212066' => 'ghi', 'Gohir.D12G036300' => 'ghi', 'Gohir.D12G168600' => 'ghi', 'Gohir.D13G150600' => 'ghi', 'Gorai.001G057300' => 'gra', 'Gorai.002G069900' => 'gra', 'Gorai.002G200000' => 'gra', 'Gorai.003G067600' => 'gra', 'Gorai.005G074800' => 'gra', 'Gorai.006G087300' => 'gra', 'Gorai.008G037500' => 'gra', 'Gorai.008G181400' => 'gra', 'Gorai.009G169400' => 'gra', 'Gorai.009G387900' => 'gra', 'Gorai.010G013300' => 'gra', 'Gorai.010G153800' => 'gra', 'Gorai.010G255800' => 'gra', 'Gorai.011G043700' => 'gra', 'Gorai.011G198900' => 'gra', 'Gorai.013G168400' => 'gra', 'GSVIVG01005212001' => 'vvi', 'GSVIVG01006163001' => 'vvi', 'GSVIVG01009625001' => 'vvi', 'GSVIVG01014338001' => 'vvi', 'GSVIVG01020005001' => 'vvi', 'GSVIVG01021450001' => 'vvi', 'GSVIVG01023975001' => 'vvi', 'GSVIVG01034490001' => 'vvi', 'HanXRQChr04g0112071' => 'han', 'HanXRQChr05g0131151' => 'han', 'HanXRQChr09g0262371' => 'han', 'HanXRQChr09g0268401' => 'han', 'HanXRQChr10g0279241' => 'han', 'HanXRQChr10g0297961' => 'han', 'HanXRQChr11g0326231' => 'han', 'HanXRQChr11g0328471' => 'han', 'HanXRQChr16g0507941' => 'han', 'HanXRQChr17g0560211' => 'han', 'Haze_02108' => 'cav', 'Haze_02428' => 'cav', 'Haze_05593' => 'cav', 'Haze_06448' => 'cav', 'Haze_09427' => 'cav', 'Haze_12022' => 'cav', 'Haze_17612' => 'cav', 'Haze_17928' => 'cav', 'Hma1.2p1_0032F.1_g019250' => 'hma', 'Hma1.2p1_0163F.1_g072690' => 'hma', 'Hma1.2p1_0265F.1_g106710' => 'hma', 'Hma1.2p1_0286F.1_g113970' => 'hma', 'Hma1.2p1_0363F.1_g136640' => 'hma', 'Hma1.2p1_0584F.1_g183470' => 'hma', 'Hma1.2p1_0885F.1_g232570' => 'hma', 'HPP92_006022' => 'vpl', 'HPP92_007320' => 'vpl', 'HPP92_011521' => 'vpl', 'HPP92_019387' => 'vpl', 'HPP92_024038' => 'vpl', 'Hund05891' => 'sun', 'Hund06450' => 'sun', 'Hund12053' => 'sun', 'Hund16800' => 'sun', 'Hund21222' => 'sun', 'Hund22896' => 'sun', 'Hund23746' => 'sun', 'Hund27083' => 'sun', 'Lalb_Chr02g0141831' => 'lal', 'Lalb_Chr02g0141841' => 'lal', 'Lalb_Chr05g0220411' => 'lal', 'Lalb_Chr06g0162081' => 'lal', 'Lalb_Chr09g0327651' => 'lal', 'Lalb_Chr13g0295051' => 'lal', 'Lalb_Chr15g0086801' => 'lal', 'Lalb_Chr16g0383781' => 'lal', 'Lalb_Chr16g0383791' => 'lal', 'Lalb_Chr18g0055441' => 'lal', 'Lalb_Chr18g0059611' => 'lal', 'Lalb_Chr20g0109661' => 'lal', 'Lalb_Chr20g0109831' => 'lal', 'Lalb_Chr20g0121871' => 'lal', 'Lalb_Chr22g0355361' => 'lal', 'Lalb_Chr25g0286371' => 'lal', 'Lj1A1187G43' => 'lonja', 'Lj1A1205T50' => 'lonja', 'Lj1A800G33' => 'lonja', 'Lj1C1187T7' => 'lonja', 'Lj1C843T11' => 'lonja', 'Lj1g0010940' => 'lja', 'Lj2A288T69' => 'lonja', 'Lj3g0024276' => 'lja', 'Lj4A47T76' => 'lonja', 'Lj4g0005805' => 'lja', 'Lj4g0006097' => 'lja', 'Lj4g0008528' => 'lja', 'Lj4g0024907' => 'lja', 'Lj5g0012472' => 'lja', 'Lj5g0018648' => 'lja', 'Lj6C789G1' => 'lonja', 'Lj6g0004000' => 'lja', 'Lj7A292G67' => 'lonja', 'Lj7A292T64' => 'lonja', 'Lj9A400T58' => 'lonja', 'Lsat_1_v5_gn_1_126181' => 'lsa', 'Lsat_1_v5_gn_4_123041' => 'lsa', 'Lsat_1_v5_gn_4_133620' => 'lsa', 'Lsat_1_v5_gn_4_53221' => 'lsa', 'Lsat_1_v5_gn_4_71961' => 'lsa', 'Lsat_1_v5_gn_7_105241' => 'lsa', 'Lsat_1_v5_gn_7_21361' => 'lsa', 'Lsat_1_v5_gn_7_28860' => 'lsa', 'Lsat_1_v5_gn_7_31260' => 'lsa', 'Lsat_1_v5_gn_8_52801' => 'lsa', 'Manes.02G191400' => 'mes', 'Manes.03G110100' => 'mes', 'Manes.04G071100' => 'mes', 'Manes.05G100500' => 'mes', 'Manes.05G164700' => 'mes', 'Manes.15G087000' => 'mes', 'Manes.15G121500' => 'mes', 'Manes.16G028300' => 'mes', 'Manes.17G046100' => 'mes', 'Manes.17G069800' => 'mes', 'Manes.18G100500' => 'mes', 'Mapoly0002s0109' => 'mpo', 'Mapoly0024s0007' => 'mpo', 'Mapoly0089s0032' => 'mpo', 'MBI04_g42241_MAGBIO' => 'mbi', 'MBI05_g11988_MAGBIO' => 'mbi', 'MBI05_g35452_MAGBIO' => 'mbi', 'MBI07_g30179_MAGBIO' => 'mbi', 'MBI07_g35859_MAGBIO' => 'mbi', 'MBI07_g35860_MAGBIO' => 'mbi', 'MBI07_g37166_MAGBIO' => 'mbi', 'MBI08_g18172_MAGBIO' => 'mbi', 'MBI09_g08441_MAGBIO' => 'mbi', 'MBI13_g01676_MAGBIO' => 'mbi', 'MBI14_g42955_MAGBIO' => 'mbi', 'MBI16_g13161_MAGBIO' => 'mbi', 'MBI17_g27204_MAGBIO' => 'mbi', 'MBI19_g21595_MAGBIO' => 'mbi', 'MD00G1148400' => 'mdo', 'MD02G1301200' => 'mdo', 'MD03G1227800' => 'mdo', 'MD05G1041100' => 'mdo', 'MD05G1124800' => 'mdo', 'MD05G1284000' => 'mdo', 'MD05G1338800' => 'mdo', 'MD05G1338900' => 'mdo', 'MD07G1022800' => 'mdo', 'MD10G1047500' => 'mdo', 'MD10G1127500' => 'mdo', 'MD10G1262300' => 'mdo', 'MD10G1293800' => 'mdo', 'MD16G1074300' => 'mdo', 'Medtr1g021670' => 'mtr', 'Medtr1g096320' => 'mtr', 'Medtr2g013690' => 'mtr', 'Medtr2g019450' => 'mtr', 'Medtr2g085170' => 'mtr', 'Medtr4g088785' => 'mtr', 'Medtr8g055930' => 'mtr', 'Medtr8g085850' => 'mtr', 'MELO3C002605.2' => 'cme', 'MELO3C003891.2' => 'cme', 'MELO3C004012.2' => 'cme', 'MELO3C007134.2' => 'cme', 'MELO3C008118.2' => 'cme', 'MELO3C016700.2' => 'cme', 'MELO3C024127.2' => 'cme', 'MELO3C033361.2' => 'cme', 'MELO3C033362.2' => 'cme', 'Migut.C00430' => 'egut', 'Migut.C01246' => 'egut', 'Migut.E00101' => 'egut', 'Migut.H01486' => 'egut', 'Migut.H01939' => 'egut', 'Migut.K00360' => 'egut', 'Migut.M00910' => 'egut', 'Migut.M01139' => 'egut', 'Migut.N02677' => 'egut', 'MSTRG.13252' => 'ama', 'MSTRG.14701' => 'ama', 'MSTRG.1521' => 'ama', 'MSTRG.15884' => 'ama', 'MSTRG.16242' => 'ama', 'MSTRG.22285' => 'ama', 'MSTRG.22444' => 'ama', 'MSTRG.2349' => 'ama', 'MSTRG.26308' => 'ama', 'MSTRG.28296' => 'ama', 'MSTRG.9895' => 'ama', 'Nitab4.5_0000110g0060' => 'nta', 'Nitab4.5_0000420g0130' => 'nta', 'Nitab4.5_0000422g0030' => 'nta', 'Nitab4.5_0000560g0180' => 'nta', 'Nitab4.5_0000703g0100' => 'nta', 'Nitab4.5_0000786g0200' => 'nta', 'Nitab4.5_0001336g0020' => 'nta', 'Nitab4.5_0001796g0030' => 'nta', 'Nitab4.5_0003348g0060' => 'nta', 'Nitab4.5_0003698g0040' => 'nta', 'Nitab4.5_0003942g0090' => 'nta', 'Nitab4.5_0004775g0070' => 'nta', 'Nitab4.5_0004864g0030' => 'nta', 'Nitab4.5_0005615g0020' => 'nta', 'Nitab4.5_0009288g0030' => 'nta', 'Nitab4.5_0009341g0010' => 'nta', 'Nitab4.5_0009535g0010' => 'nta', 'Nn1g03995' => 'nnu', 'Nn1g04100' => 'nnu', 'Nn1g06530' => 'nnu', 'Nn3g16404' => 'nnu', 'Nn3g17212' => 'nnu', 'Nn3g20776' => 'nnu', 'Nn3g21923' => 'nnu', 'Nn5g27737' => 'nnu', 'Nn5g29461' => 'nnu', 'Nn7g38355' => 'nnu', 'Nn8g39873' => 'nnu', 'Oeu000548.2' => 'oeu', 'Oeu004672.1' => 'oeu', 'Oeu015605.2' => 'oeu', 'Oeu016092.1' => 'oeu', 'Oeu017879.3' => 'oeu', 'Oeu024910.1' => 'oeu', 'Oeu028965.1' => 'oeu', 'Oeu031269.1' => 'oeu', 'Oeu031270.1' => 'oeu', 'Oeu032535.1' => 'oeu', 'Oeu034151.1' => 'oeu', 'Oeu034152.1' => 'oeu', 'Oeu034588.2' => 'oeu', 'Oeu050846.1' => 'oeu', 'Oeu050849.2' => 'oeu', 'Oeu051063.2' => 'oeu', 'Oeu052368.1' => 'oeu', 'Oeu052370.1' => 'oeu', 'Os01g0210400' => 'osa', 'Os01g0304300' => 'osa', 'Os01g0749100' => 'osa', 'Os02g0745800' => 'osa', 'Os03g0769050' => 'osa', 'Os05g0531500' => 'osa', 'Os06g0724300' => 'osa', 'Os11g0198100' => 'osa', 'Peaxi162Scf00069g01425' => 'pax', 'Peaxi162Scf00280g00811' => 'pax', 'Peaxi162Scf00310g00615' => 'pax', 'Peaxi162Scf00362g00542' => 'pax', 'Peaxi162Scf00461g00310' => 'pax', 'Peaxi162Scf00530g00118' => 'pax', 'Peaxi162Scf00541g00057' => 'pax', 'Peaxi162Scf00661g00017' => 'pax', 'Peaxi162Scf00926g00027' => 'pax', 'Peaxi162Scf01064g00263' => 'pax', 'Peaxi162Scf01211g00135' => 'pax', 'PGR004G2336' => 'pgr', 'PGR042G0327' => 'pgr', 'PGR042G1957' => 'pgr', 'PGR042G2003' => 'pgr', 'PGR042G3929' => 'pgr', 'PGR083G1137' => 'pgr', 'PGR083G1364' => 'pgr', 'PGSC0003DMG400003381' => 'stu', 'PGSC0003DMG400003417' => 'stu', 'PGSC0003DMG400008981' => 'stu', 'PGSC0003DMG400012417' => 'stu', 'PGSC0003DMG400012823' => 'stu', 'PGSC0003DMG400016885' => 'stu', 'PGSC0003DMG400022812' => 'stu', 'PGSC0003DMG400029726' => 'stu', 'PGSC0003DMG401009243' => 'stu', 'PGSC0003DMG401031505' => 'stu', 'PGSC0003DMG402031505' => 'stu', 'Phvul.001G017600' => 'pvu', 'Phvul.002G193500' => 'pvu', 'Phvul.002G228900' => 'pvu', 'Phvul.002G236800' => 'pvu', 'Phvul.003G049500' => 'pvu', 'Phvul.005G072000' => 'pvu', 'Phvul.006G164800' => 'pvu', 'Phvul.006G185100' => 'pvu', 'Phvul.007G090000' => 'pvu', 'Potri.001G399800' => 'ptr', 'Potri.002G149900' => 'ptr', 'Potri.004G044100' => 'ptr', 'Potri.004G177600' => 'ptr', 'Potri.009G138000' => 'ptr', 'Potri.010G094000' => 'ptr', 'Potri.011G053000' => 'ptr', 'Potri.011G119300' => 'ptr', 'Potri.013G113700' => 'ptr', 'Potri.018G107800' => 'ptr', 'Potri.019G084100' => 'ptr', 'Pp3c14_23720' => 'ppa', 'Pp3c16_6340' => 'ppa', 'Pp3c23_13420' => 'ppa', 'Pp3c24_2740' => 'ppa', 'Pp3c25_860' => 'ppa', 'Pp3c8_21750' => 'ppa', 'Prupe.1G273000' => 'ppe', 'Prupe.1G273700' => 'ppe', 'Prupe.1G274100' => 'ppe', 'Prupe.2G023300' => 'ppe', 'Prupe.4G048000' => 'ppe', 'Prupe.4G080400' => 'ppe', 'Prupe.4G181200' => 'ppe', 'Prupe.8G056900' => 'ppe', 'Prupe.8G168700' => 'ppe', 'Psat1g189080' => 'psa', 'Psat1g204760' => 'psa', 'Psat4g175560' => 'psa', 'Psat4g177720' => 'psa', 'Psat5g244240' => 'psa', 'Psat6g010720' => 'psa', 'Psat6g187200' => 'psa', 'Psat7g072040' => 'psa', 'PSO017G3501' => 'pso', 'PSO063G2148' => 'pso', 'PSO063G5608' => 'pso', 'PSO210G6392' => 'pso', 'PSO541G2319' => 'pso', 'PSO541G2836' => 'pso', 'PSO541G4012' => 'pso', 'PSO541G6253' => 'pso', 'PSO675G0580' => 'pso', 'PSO675G0856' => 'pso', 'PSO675G5635' => 'pso', 'PSO675G9157' => 'pso', 'PSO832G1660' => 'pso', 'PSO832G1969' => 'pso', 'QL02p007186' => 'qlo', 'QL02p033904' => 'qlo', 'QL03p064391' => 'qlo', 'QL05p040593' => 'qlo', 'QL05p058242' => 'qlo', 'QL08p021825' => 'qlo', 'QL11p004981' => 'qlo', 'RcHm_v2.0_Chr1g0318301' => 'rch', 'RcHm_v2.0_Chr4g0418501' => 'rch', 'RcHm_v2.0_Chr4g0439971' => 'rch', 'RcHm_v2.0_Chr5g0008541' => 'rch', 'RcHm_v2.0_Chr5g0014101' => 'rch', 'RcHm_v2.0_Chr5g0014131' => 'rch', 'RcHm_v2.0_Chr5g0033621' => 'rch', 'RcHm_v2.0_Chr6g0272041' => 'rch', 'RcHm_v2.0_Chr6g0278831' => 'rch', 'Rhsim02G0130400' => 'rsi', 'Rhsim02G0171100' => 'rsi', 'Rhsim05G0053000' => 'rsi', 'Rhsim05G0053100' => 'rsi', 'Rhsim06G0096500' => 'rsi', 'Rhsim06G0096600' => 'rsi', 'Rhsim06G0199100' => 'rsi', 'Rhsim12G0062300' => 'rsi', 'Rhsim12G0062800' => 'rsi', 'Sabra02G0118600' => 'sbr', 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'Solyc03g079860.2' => 'sly', 'Solyc04g079770.3' => 'sly', 'Solyc05g007430.4' => 'sly', 'Solyc07g063150.3' => 'sly', 'Solyc08g016620.3' => 'sly', 'Solyc09g057590.3' => 'sly', 'Solyc09g057600.1' => 'sly', 'Solyc10g009050.3' => 'sly', 'Solyc11g017420.2' => 'sly', 'Sopen01g053810' => 'spe', 'Sopen02g023040' => 'spe', 'Sopen03g002440' => 'spe', 'Sopen04g033350' => 'spe', 'Sopen05g003310' => 'spe', 'Sopen07g004050' => 'spe', 'Sopen07g031340' => 'spe', 'Sopen08g006990' => 'spe', 'Sopen10g004830' => 'spe', 'Sopen11g009370' => 'spe', 'Sp1g24450' => 'spa', 'Sp1g29670' => 'spa', 'Sp1g39600' => 'spa', 'Sp2g11080' => 'spa', 'Sp2g13970' => 'spa', 'Sp4g16130' => 'spa', 'Sp6g13080' => 'spa', 'Sp7g37270' => 'spa', 'TAR371G0065' => 'tar', 'TAR376G0340' => 'tar', 'TAR376G0435' => 'tar', 'TAR381G0002' => 'tar', 'TAR381G1236' => 'tar', 'TAR624G0055' => 'tar', 'TAR624G0324' => 'tar', 'TAR624G0696' => 'tar', 'TAR624G0906' => 'tar', 'TAR625G0107' => 'tar', 'TAR626G0015' => 'tar', 'TAR626G1356' => 'tar', 'TAR627G0888' => 'tar', 'TAR628G0399' => 'tar', 'TAR628G1327' => 'tar', 'TAR629G2831' => 'tar', 'TAR629G2874' => 'tar', 'TAR633G1432' => 'tar', 'TAR633G2771' => 'tar', 'THA.LOC104803394' => 'tha', 'THA.LOC104805153' => 'tha', 'THA.LOC104806784' => 'tha', 'THA.LOC104810473' => 'tha', 'THA.LOC104813100' => 'tha', 'THA.LOC104814215' => 'tha', 'THA.LOC104815554' => 'tha', 'THA.LOC104820544' => 'tha', 'THA.LOC104824754' => 'tha', 'THA.LOC104827717' => 'tha', 'Thecc.02G031400' => 'tca', 'Thecc.02G055900' => 'tca', 'Thecc.02G350800' => 'tca', 'Thecc.06G150900' => 'tca', 'Thecc.06G186600' => 'tca', 'Thecc.07G089600' => 'tca', 'Thecc.08G020400' => 'tca', 'Thecc.08G182100' => 'tca', 'Thhalv10000873m.g' => 'esa', 'Thhalv10004185m.g' => 'esa', 'Thhalv10006981m.g' => 'esa', 'Thhalv10007204m.g' => 'esa', 'Thhalv10011374m.g' => 'esa', 'Thhalv10013482m.g' => 'esa', 'Thhalv10017801m.g' => 'esa', 'Thhalv10024983m.g' => 'esa', 'TPR.G12072' => 'tpr', 'TPR.G15769' => 'tpr', 'TPR.G16504' => 'tpr', 'TPR.G16506' => 'tpr', 'TPR.G24345' => 'tpr', 'TPR.G26666' => 'tpr', 'TPR.G27320' => 'tpr', 'TPR.G31819' => 'tpr', 'TPR.G38879' => 'tpr', 'TPR.G39015' => 'tpr', 'TPR.G8819' => 'tpr', 'TWI09G0924' => 'twi', 'TWI12G0811' => 'twi', 'TWI12G1294' => 'twi', 'TWI31G0150' => 'twi', 'TWI36G1262' => 'twi', 'TWI38G1287' => 'twi', 'TWI38G1633' => 'twi', 'TWI38G1982' => 'twi', 'TWI39G0116' => 'twi', 'TWI60G1011' => 'twi', 'TWI63G0171' => 'twi', 'TWI73G0839' => 'twi', 'TWI79G1511' => 'twi', 'unitig_0.g915' => 'ugi', 'unitig_0.g916' => 'ugi', 'unitig_21.g20219' => 'ugi', 'unitig_21.g20416' => 'ugi', 'unitig_578.g16132' => 'ugi', 'unitig_578.g16718' => 'ugi', 'unitig_62.g23481' => 'ugi', 'unitig_744.g24535' => 'ugi', 'unitig_749.g13525' => 'ugi', 'vmacro01248' => 'vma', 'vmacro02290' => 'vma', 'vmacro10946' => 'vma', 'vmacro11865' => 'vma', 'vmacro12493' => 'vma', 'vmacro17322' => 'vma', 'vmacro21599' => 'vma', 'vmacro23041' => 'vma', 'VMungo0251G0004' => 'vmu', 'VMungo0251G2639' => 'vmu', 'VMungo0251G2967' => 'vmu', 'VMungo0540G0864' => 'vmu', 'VMungo0540G1569' => 'vmu', 'VMungo0647G0317' => 'vmu', 'VMungo0720G1373' => 'vmu', 'VMungo0720G1508' => 'vmu', 'VMungo1080G0485' => 'vmu', 'VMungo1215G3177' => 'vmu', 'Zm00001eb112600' => 'zma', 'Zm00001eb120220' => 'zma', 'Zm00001eb153240' => 'zma', 'Zm00001eb168880' => 'zma', 'Zm00001eb213920' => 'zma', 'Zm00001eb228280' => 'zma', 'Zm00001eb254580' => 'zma', 'Zm00001eb272180' => 'zma', 'Zm00001eb293190' => 'zma', 'Zm00001eb322930' => 'zma', 'Zm00001eb353360' => 'zma', 'Zm00001eb353390' => 'zma', 'Zm00001eb353430' => 'zma', 'Zm00001eb353440' => 'zma', 'Zm00001eb353780' => 'zma' ), 'gf_id' => 'HOM05D000499', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000499' ), 'data_identifier' => 'HOM05D000499', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000499', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1066', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p29780' => 'bna', 'A02p33180' => 'bna', 'A03p16470' => 'bna', 'A03p66010' => 'bna', 'A04p25970' => 'bna', 'A06p01270' => 'bna', 'A06p46080' => 'bna', 'A07p11400' => 'bna', 'A08p01840' => 'bna', 'A08p08230' => 'bna', 'A08p25740' => 'bna', 'A09p32070' => 'bna', 'A09p37830' => 'bna', 'A09p42840' => 'bna', 'A09p42850' => 'bna', 'Aa31LG10G2060' => 'aar', 'Aa31LG2G7410' => 'aar', 'Aa31LG6G10200' => 'aar', 'Aa31LG6G16680' => 'aar', 'Aa31LG6G8470' => 'aar', 'Aa31LG9G12730' => 'aar', 'Aa31LG9G13680' => 'aar', 'Aa31LG9G14920' => 'aar', 'Aa31LG9G6650' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4977' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5467' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3254' => 'aag', 'Actinidia02578' => 'ach', 'Actinidia07693' => 'ach', 'Actinidia08413' => 'ach', 'Actinidia08414' => 'ach', 'Actinidia15289' => 'ach', 'Actinidia19871' => 'ach', 'Actinidia21475' => 'ach', 'Actinidia22576' => 'ach', 'Actinidia28327' => 'ach', 'Actinidia32491' => 'ach', 'Actinidia39463' => 'ach', 'Actinidia39571' => 'ach', 'Ah.01g013750' => 'amhyb', 'Ah.01g023210' => 'amhyb', 'Ah.04g164850' => 'amhyb', 'Ah.05g178060' => 'amhyb', 'Ah.07g204270' => 'amhyb', 'Ah.07g208480' => 'amhyb', 'Ah.09g237410' => 'amhyb', 'Ah.14g089460' => 'amhyb', 'AL1G41790' => 'aly', 'AL1G49050' => 'aly', 'AL1G53810' => 'aly', 'AL1G61400' => 'aly', 'AL4G18580' => 'aly', 'AL5G12510' => 'aly', 'AL5G12540' => 'aly', 'AL6G43230' => 'aly', 'AL7G10370' => 'aly', 'AL7G19250' => 'aly', 'AL8G12240' => 'aly', 'AL8G18540' => 'aly', 'Aqoxy1G02409' => 'aox', 'Aqoxy2G03993' => 'aox', 'Aqoxy3G03357' => 'aox', 'Aqoxy4G00785' => 'aox', 'Aqoxy5G02598' => 'aox', 'Aqoxy6G00132' => 'aox', 'Aqoxy7G01776' => 'aox', 'Aqoxy7G02316' => 'aox', 'Aqoxy7G03973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.12AFKW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B8730' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27IQR1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3F75VG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3RE0GA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41TCQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.527VTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FIR39' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5W8UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DA38EV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ63HS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H1I32C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HC27T5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4M8AP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7N3CZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9UVDZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LS1NQA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT1D4B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SKC4TM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCFV76' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF9Q1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQWD9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1ZM88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WE07RT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YCK7VH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJE6Q6' => 'arhy', 'AT1G28240' => 'ath', 'AT1G34550' => 'ath', 'AT1G53040' => 'ath', 'AT2G02910' => 'ath', 'AT4G09630' => 'ath', 'AT4G38500' => 'ath', 'AT5G42660' => 'ath', 'AT5G46220' => 'ath', 'ATR0152G026' => 'atr', 'ATR0564G343' => 'atr', 'ATR0706G151' => 'atr', 'ATR0733G207' => 'atr', 'ATR0751G234' => 'atr', 'ATR0807G048' => 'atr', 'ATR1091G084' => 'atr', 'Atru.chr10.1229' => 'acertr', 'Atru.chr10.1230' => 'acertr', 'Atru.chr10.1874' => 'acertr', 'Atru.chr11.1808' => 'acertr', 'Atru.chr13.1795' => 'acertr', 'Atru.chr13.570' => 'acertr', 'Atru.chr2.2608' => 'acertr', 'Atru.chr2.2609' => 'acertr', 'Atru.chr5.3428' => 'acertr', 'Atru.chr8.1171' => 'acertr', 'AUR62004651' => 'cqu', 'AUR62008675' => 'cqu', 'AUR62010014' => 'cqu', 'AUR62013004' => 'cqu', 'AUR62014825' => 'cqu', 'AUR62015015' => 'cqu', 'AUR62015151' => 'cqu', 'AUR62017020' => 'cqu', 'AUR62019422' => 'cqu', 'AUR62023570' => 'cqu', 'AUR62025571' => 'cqu', 'AUR62029098' => 'cqu', 'AUR62033863' => 'cqu', 'AUR62034296' => 'cqu', 'AUR62040075' => 'cqu', 'BcaB02g07334' => 'bca', 'BcaB02g10575' => 'bca', 'BcaB03g12119' => 'bca', 'BcaB03g12120' => 'bca', 'BcaB03g13945' => 'bca', 'BcaB04g17123' => 'bca', 'BcaB04g17867' => 'bca', 'BcaB04g19839' => 'bca', 'BcaB07g30317' => 'bca', 'BcaB07g32432' => 'bca', 'BcaB07g33362' => 'bca', 'BcaB08g36611' => 'bca', 'BcaC01g00028' => 'bca', 'BcaC01g01356' => 'bca', 'BcaC01g02034' => 'bca', 'BcaC01g06051' => 'bca', 'BcaC03g16839' => 'bca', 'BcaC03g17176' => 'bca', 'BcaC05g26829' => 'bca', 'BcaC06g31490' => 'bca', 'BcaC06g35344' => 'bca', 'BcaC06g36570' => 'bca', 'BcaC07g37537' => 'bca', 'BcaC08g43491' => 'bca', 'BcaC08g43773' => 'bca', 'BcaNung00234' => 'bca', 'BcaNung01982' => 'bca', 'BcaNung03707' => 'bca', 'BcaNung06454' => 'bca', 'BolC2t10762H' => 'bol', 'BolC2t11191H' => 'bol', 'BolC3t14322H' => 'bol', 'BolC3t19747H' => 'bol', 'BolC3t21425H' => 'bol', 'BolC4t27800H' => 'bol', 'BolC5t31423H' => 'bol', 'BolC6t35951H' => 'bol', 'BolC6t36282H' => 'bol', 'BolC7t40678H' => 'bol', 'BolC7t40679H' => 'bol', 'BolC7t42222H' => 'bol', 'BolC7t43492H' => 'bol', 'BolC7t46785H' => 'bol', 'BolC8t47853H' => 'bol', 'BolC9t56805H' => 'bol', 'BraA02t08000Z' => 'bra', 'BraA02t08341Z' => 'bra', 'BraA03t10936Z' => 'bra', 'BraA03t15657Z' => 'bra', 'BraA04t18100Z' => 'bra', 'BraA05t20523Z' => 'bra', 'BraA06t23353Z' => 'bra', 'BraA06t27473Z' => 'bra', 'BraA06t27769Z' => 'bra', 'BraA07t28928Z' => 'bra', 'BraA08t32236Z' => 'bra', 'BraA08t32841Z' => 'bra', 'BraA08t34524Z' => 'bra', 'BraA09t38742Z' => 'bra', 'BraA09t39295Z' => 'bra', 'C02p47180' => 'bna', 'C02p50990' => 'bna', 'C03p19360' => 'bna', 'C03p74950' => 'bna', 'C03p91000' => 'bna', 'C04p63260' => 'bna', 'C05p27050' => 'bna', 'C06p08750' => 'bna', 'C06p11490' => 'bna', 'C07p02820' => 'bna', 'C07p17180' => 'bna', 'C07p29440' => 'bna', 'C07p63730' => 'bna', 'C09p39260' => 'bna', 'CAN.G1164.34' => 'can', 'CAN.G1164.39' => 'can', 'CAN.G1530.3' => 'can', 'CAN.G162.61' => 'can', 'CAN.G176.6' => 'can', 'CAN.G289.49' => 'can', 'CAN.G370.21' => 'can', 'CAN.G370.22' => 'can', 'CAN.G371.117' => 'can', 'CAN.G58.37' => 'can', 'CAN.G588.98' => 'can', 'CANSAT21G2266' => 'cansat', 'CANSAT25G2799' => 'cansat', 'CANSAT35G0862' => 'cansat', 'CANSAT35G1704' => 'cansat', 'CANSAT35G1760' => 'cansat', 'CANSAT56G3971' => 'cansat', 'CANSAT56G4116' => 'cansat', 'CANSAT80G1259' => 'cansat', 'CARHR027730' => 'chi', 'CARHR033880' => 'chi', 'CARHR043270' => 'chi', 'CARHR145330' => 'chi', 'CARHR145340' => 'chi', 'CARHR175570' => 'chi', 'CARHR181570' => 'chi', 'CARHR258470' => 'chi', 'CARHR260490' => 'chi', 'CARHR294220' => 'chi', 'Carub.0001s2668' => 'cru', 'Carub.0001s3257' => 'cru', 'Carub.0001s4220' => 'cru', 'Carub.0005s0179' => 'cru', 'Carub.0006s2807' => 'cru', 'Carub.0007s0039' => 'cru', 'Carub.0008s0169' => 'cru', 'Carub.0008s0636' => 'cru', 'Ca_00338_v3' => 'car', 'Ca_00542_v3' => 'car', 'Ca_01844_v3' => 'car', 'Ca_10611_v3' => 'car', 'Ca_13326_v3' => 'car', 'Ca_17944_v3' => 'car', 'Ca_18546_v3' => 'car', 'Ca_24219_v3' => 'car', 'Ca_29972_v3' => 'car', 'CBR_g3681' => 'cbr', 'CBR_g40021' => 'cbr', 'Cc01_g08140' => 'ccan', 'Cc02_g13410' => 'ccan', 'Cc02_g37480' => 'ccan', 'Cc05_g12030' => 'ccan', 'Cc09_g03370' => 'ccan', 'Cc09_g10300' => 'ccan', 'Cc10_g03530' => 'ccan', 'Cc10_g11380' => 'ccan', 'CDE01G0176' => 'cde', 'CDE02G0675' => 'cde', 'CDE02G0942' => 'cde', 'CDE02G1153' => 'cde', 'CDE02G4177' => 'cde', 'CDE04G2117' => 'cde', 'CDE04G2736' => 'cde', 'CDE08G1161' => 'cde', 'CDE09G1238' => 'cde', 'Cfa000467' => 'cfa', 'Cfa000947' => 'cfa', 'Cfa004969' => 'cfa', 'Cfa005284' => 'cfa', 'Cfa008993' => 'cfa', 'Cfa018187' => 'cfa', 'Cfa018454' => 'cfa', 'Cfa020585' => 'cfa', 'Ciclev10000424m.g' => 'ccl', 'Ciclev10003605m.g' => 'ccl', 'Ciclev10007828m.g' => 'ccl', 'Ciclev10014620m.g' => 'ccl', 'Ciclev10015169m.g' => 'ccl', 'Ciclev10018291m.g' => 'ccl', 'Ciclev10028256m.g' => 'ccl', 'Ciclev10033822m.g' => 'ccl', 'CiPaw.05G060300' => 'cil', 'CiPaw.05G085000' => 'cil', 'CiPaw.06G083700' => 'cil', 'CiPaw.06G120300' => 'cil', 'CiPaw.09G060500' => 'cil', 'CiPaw.09G123800' => 'cil', 'CiPaw.11G169700' => 'cil', 'CiPaw.12G118300' => 'cil', 'CiPaw.15G071000' => 'cil', 'CiPaw.15G081900' => 'cil', 'ClCG01G024610' => 'cla', 'ClCG03G006070' => 'cla', 'ClCG05G019250' => 'cla', 'ClCG09G009500' => 'cla', 'ClCG11G008200' => 'cla', 'ClCG11G018080' => 'cla', 'COL.COLO4_17373' => 'col', 'COL.COLO4_22994' => 'col', 'COL.COLO4_26389' => 'col', 'COL.COLO4_27170' => 'col', 'COL.COLO4_31074' => 'col', 'COL.COLO4_31465' => 'col', 'COL.COLO4_36438' => 'col', 'COL.COLO4_36439' => 'col', 'Cpa.g.c38781' => 'cpa', 'Cpa.g.sc128.12' => 'cpa', 'Cpa.g.sc166.7' => 'cpa', 'Cpa.g.sc166.8' => 'cpa', 'Cpa.g.sc20.111' => 'cpa', 'Cpa.g.sc27.31' => 'cpa', 'Cpa.g.sc64.36' => 'cpa', 'Cpa.g.sc64.37' => 'cpa', 'Cpa.g.sc66.49' => 'cpa', 'Cpa.g.sc80.64' => 'cpa', 'CsaV3_1G012320' => 'csa', 'CsaV3_2G008480' => 'csa', 'CsaV3_2G033450' => 'csa', 'CsaV3_3G044830' => 'csa', 'CsaV3_4G033710' => 'csa', 'CsaV3_6G051730' => 'csa', 'CsaV3_7G025350' => 'csa', 'CSS0001067' => 'camsi', 'CSS0005996' => 'camsi', 'CSS0006590' => 'camsi', 'CSS0009673' => 'camsi', 'CSS0010201' => 'camsi', 'CSS0010549' => 'camsi', 'CSS0011364' => 'camsi', 'CSS0014473' => 'camsi', 'CSS0014961' => 'camsi', 'CSS0020191' => 'camsi', 'CSS0021165' => 'camsi', 'CSS0022306' => 'camsi', 'CSS0030591' => 'camsi', 'CSS0030696' => 'camsi', 'CSS0032653' => 'camsi', 'CSS0037487' => 'camsi', 'CSS0041102' => 'camsi', 'CSS0041261' => 'camsi', 'CSS0046246' => 'camsi', 'CSS0049256' => 'camsi', 'DCAR_004075' => 'dca', 'DCAR_011538' => 'dca', 'DCAR_019553' => 'dca', 'DCAR_020952' => 'dca', 'DCAR_021739' => 'dca', 'DCAR_027407' => 'dca', 'DCAR_027913' => 'dca', 'DCAR_028066' => 'dca', 'Dinv05899' => 'din', 'Dinv07563' => 'din', 'Dinv08010' => 'din', 'Dinv14125' => 'din', 'Dinv20172' => 'din', 'Dinv30743' => 'din', 'Dinv31229' => 'din', 'Dinv34162' => 'din', 'Dinv36028' => 'din', 'Dinv39368' => 'din', 'Dinv40565' => 'din', 'Dinv41706' => 'din', 'Duzib052G0089' => 'dzi', 'Duzib116G0641' => 'dzi', 'Duzib132G0069' => 'dzi', 'Duzib132G1219' => 'dzi', 'Duzib147G0278' => 'dzi', 'Duzib160G0480' => 'dzi', 'Duzib170G0661' => 'dzi', 'Duzib177G0591' => 'dzi', 'Duzib187G1353' => 'dzi', 'Duzib192G0858' => 'dzi', 'Duzib192G0883' => 'dzi', 'Duzib213G0506' => 'dzi', 'Duzib235G0289' => 'dzi', 'Duzib251G0422' => 'dzi', 'ECA232G3898' => 'eca', 'ECA233G5950' => 'eca', 'ECA234G1699' => 'eca', 'ECA234G2421' => 'eca', 'ECA236G0426' => 'eca', 'ECA236G4331' => 'eca', 'ECA248G2573' => 'eca', 'EL10Ac1g00077' => 'bvu', 'EL10Ac1g01746' => 'bvu', 'EL10Ac2g03464' => 'bvu', 'EL10Ac4g08176' => 'bvu', 'EL10Ac7g17521' => 'bvu', 'EL10Ac8g20386' => 'bvu', 'EL10Ac9g21343' => 'bvu', 'EL10Ac9g22688' => 'bvu', 'Eucgr.B03434' => 'egr', 'Eucgr.D00618' => 'egr', 'Eucgr.E02395' => 'egr', 'Eucgr.F01129' => 'egr', 'Eucgr.F02622' => 'egr', 'Eucgr.F04207' => 'egr', 'FAN01G0570' => 'fan', 'FAN03G3351' => 'fan', 'FAN06G3702' => 'fan', 'FAN07G2149' => 'fan', 'FAN10G3758' => 'fan', 'FAN11G1170' => 'fan', 'FAN11G2050' => 'fan', 'FAN11G2724' => 'fan', 'FAN12G1700' => 'fan', 'FAN12G2028' => 'fan', 'FAN15G1160' => 'fan', 'FAN15G3063' => 'fan', 'FAN16G2540' => 'fan', 'FAN16G3077' => 'fan', 'FAN16G3624' => 'fan', 'FAN17G0221' => 'fan', 'FAN20G2492' => 'fan', 'FAN20G2905' => 'fan', 'FAN21G0548' => 'fan', 'FAN21G1300' => 'fan', 'FAN22G0077' => 'fan', 'FAN22G1315' => 'fan', 'FAN24G1280' => 'fan', 'FAN24G1445' => 'fan', 'FAN24G3527' => 'fan', 'FAN25G0464' => 'fan', 'FAN25G2885' => 'fan', 'FAN25G3270' => 'fan', 'FAN27G1101' => 'fan', 'FAN27G2846' => 'fan', 'FAN27G3524' => 'fan', 'FvH4_2g11770' => 'fve', 'FvH4_2g15630' => 'fve', 'FvH4_3g05570' => 'fve', 'FvH4_3g09110' => 'fve', 'FvH4_3g19940' => 'fve', 'FvH4_4g04821' => 'fve', 'FvH4_4g31480' => 'fve', 'FvH4_7g01740' => 'fve', 'Glyma.05G130400' => 'gma', 'Glyma.05G156400' => 'gma', 'Glyma.07G197000' => 'gma', 'Glyma.08G085151' => 'gma', 'Glyma.08G114500' => 'gma', 'Glyma.08G300400' => 'gma', 'Glyma.10G215800' => 'gma', 'Glyma.12G224400' => 'gma', 'Glyma.13G179300' => 'gma', 'Glyma.13G218151' => 'gma', 'Glyma.13G238800' => 'gma', 'Glyma.13G276900' => 'gma', 'Glyma.14G078200' => 'gma', 'Glyma.15G074500' => 'gma', 'Glyma.15G094100' => 'gma', 'Glyma.17G247200' => 'gma', 'Glyma.18G120100' => 'gma', 'Glyma.20G176000' => 'gma', 'Gohir.A01G063600' => 'ghi', 'Gohir.A01G170301' => 'ghi', 'Gohir.A02G060500' => 'ghi', 'Gohir.A05G133850' => 'ghi', 'Gohir.A05G161400' => 'ghi', 'Gohir.A06G012900' => 'ghi', 'Gohir.A06G035901' => 'ghi', 'Gohir.A06G127100' => 'ghi', 'Gohir.A06G210500' => 'ghi', 'Gohir.A08G008650' => 'ghi', 'Gohir.A09G072700' => 'ghi', 'Gohir.A09G088301' => 'ghi', 'Gohir.A10G040600' => 'ghi', 'Gohir.A12G036300' => 'ghi', 'Gohir.A12G143350' => 'ghi', 'Gohir.A12G165500' => 'ghi', 'Gohir.A13G145700' => 'ghi', 'Gohir.D01G050000' => 'ghi', 'Gohir.D01G051366' => 'ghi', 'Gohir.D01G161350' => 'ghi', 'Gohir.D02G065900' => 'ghi', 'Gohir.D05G164200' => 'ghi', 'Gohir.D05G355500' => 'ghi', 'Gohir.D06G010400' => 'ghi', 'Gohir.D06G111250' => 'ghi', 'Gohir.D06G132000' => 'ghi', 'Gohir.D06G210500' => 'ghi', 'Gohir.D07G165675' => 'ghi', 'Gohir.D08G062240' => 'ghi', 'Gohir.D08G086101' => 'ghi', 'Gohir.D08G138060' => 'ghi', 'Gohir.D09G072300' => 'ghi', 'Gohir.D10G041400' => 'ghi', 'Gohir.D11G191020' => 'ghi', 'Gohir.D11G212066' => 'ghi', 'Gohir.D12G036300' => 'ghi', 'Gohir.D12G168600' => 'ghi', 'Gohir.D13G150600' => 'ghi', 'Gorai.001G057300' => 'gra', 'Gorai.002G069900' => 'gra', 'Gorai.002G200000' => 'gra', 'Gorai.003G067600' => 'gra', 'Gorai.005G074800' => 'gra', 'Gorai.006G087300' => 'gra', 'Gorai.008G037500' => 'gra', 'Gorai.008G181400' => 'gra', 'Gorai.009G169400' => 'gra', 'Gorai.009G387900' => 'gra', 'Gorai.010G013300' => 'gra', 'Gorai.010G153800' => 'gra', 'Gorai.010G255800' => 'gra', 'Gorai.011G043700' => 'gra', 'Gorai.011G198900' => 'gra', 'Gorai.013G168400' => 'gra', 'GSVIVG01005212001' => 'vvi', 'GSVIVG01006163001' => 'vvi', 'GSVIVG01009625001' => 'vvi', 'GSVIVG01014338001' => 'vvi', 'GSVIVG01020005001' => 'vvi', 'GSVIVG01021450001' => 'vvi', 'GSVIVG01023975001' => 'vvi', 'GSVIVG01034490001' => 'vvi', 'HanXRQChr04g0112071' => 'han', 'HanXRQChr05g0131151' => 'han', 'HanXRQChr09g0262371' => 'han', 'HanXRQChr09g0268401' => 'han', 'HanXRQChr10g0279241' => 'han', 'HanXRQChr10g0297961' => 'han', 'HanXRQChr11g0326231' => 'han', 'HanXRQChr11g0328471' => 'han', 'HanXRQChr16g0507941' => 'han', 'HanXRQChr17g0560211' => 'han', 'Haze_02108' => 'cav', 'Haze_02428' => 'cav', 'Haze_05593' => 'cav', 'Haze_06448' => 'cav', 'Haze_09427' => 'cav', 'Haze_12022' => 'cav', 'Haze_17612' => 'cav', 'Haze_17928' => 'cav', 'Hma1.2p1_0032F.1_g019250' => 'hma', 'Hma1.2p1_0163F.1_g072690' => 'hma', 'Hma1.2p1_0265F.1_g106710' => 'hma', 'Hma1.2p1_0286F.1_g113970' => 'hma', 'Hma1.2p1_0363F.1_g136640' => 'hma', 'Hma1.2p1_0584F.1_g183470' => 'hma', 'Hma1.2p1_0885F.1_g232570' => 'hma', 'HPP92_006022' => 'vpl', 'HPP92_007320' => 'vpl', 'HPP92_011521' => 'vpl', 'HPP92_019387' => 'vpl', 'HPP92_024038' => 'vpl', 'Hund05891' => 'sun', 'Hund06450' => 'sun', 'Hund12053' => 'sun', 'Hund16800' => 'sun', 'Hund21222' => 'sun', 'Hund22896' => 'sun', 'Hund23746' => 'sun', 'Hund27083' => 'sun', 'Lalb_Chr02g0141831' => 'lal', 'Lalb_Chr02g0141841' => 'lal', 'Lalb_Chr05g0220411' => 'lal', 'Lalb_Chr06g0162081' => 'lal', 'Lalb_Chr09g0327651' => 'lal', 'Lalb_Chr13g0295051' => 'lal', 'Lalb_Chr15g0086801' => 'lal', 'Lalb_Chr16g0383781' => 'lal', 'Lalb_Chr16g0383791' => 'lal', 'Lalb_Chr18g0055441' => 'lal', 'Lalb_Chr18g0059611' => 'lal', 'Lalb_Chr20g0109661' => 'lal', 'Lalb_Chr20g0109831' => 'lal', 'Lalb_Chr20g0121871' => 'lal', 'Lalb_Chr22g0355361' => 'lal', 'Lalb_Chr25g0286371' => 'lal', 'Lj1A1187G43' => 'lonja', 'Lj1A1205T50' => 'lonja', 'Lj1A800G33' => 'lonja', 'Lj1C1187T7' => 'lonja', 'Lj1C843T11' => 'lonja', 'Lj1g0010940' => 'lja', 'Lj2A288T69' => 'lonja', 'Lj3g0024276' => 'lja', 'Lj4A47T76' => 'lonja', 'Lj4g0005805' => 'lja', 'Lj4g0006097' => 'lja', 'Lj4g0008528' => 'lja', 'Lj4g0024907' => 'lja', 'Lj5g0012472' => 'lja', 'Lj5g0018648' => 'lja', 'Lj6C789G1' => 'lonja', 'Lj6g0004000' => 'lja', 'Lj7A292G67' => 'lonja', 'Lj7A292T64' => 'lonja', 'Lj9A400T58' => 'lonja', 'Lsat_1_v5_gn_1_126181' => 'lsa', 'Lsat_1_v5_gn_4_123041' => 'lsa', 'Lsat_1_v5_gn_4_133620' => 'lsa', 'Lsat_1_v5_gn_4_53221' => 'lsa', 'Lsat_1_v5_gn_4_71961' => 'lsa', 'Lsat_1_v5_gn_7_105241' => 'lsa', 'Lsat_1_v5_gn_7_21361' => 'lsa', 'Lsat_1_v5_gn_7_28860' => 'lsa', 'Lsat_1_v5_gn_7_31260' => 'lsa', 'Lsat_1_v5_gn_8_52801' => 'lsa', 'Manes.02G191400' => 'mes', 'Manes.03G110100' => 'mes', 'Manes.04G071100' => 'mes', 'Manes.05G100500' => 'mes', 'Manes.05G164700' => 'mes', 'Manes.15G087000' => 'mes', 'Manes.15G121500' => 'mes', 'Manes.16G028300' => 'mes', 'Manes.17G046100' => 'mes', 'Manes.17G069800' => 'mes', 'Manes.18G100500' => 'mes', 'Mapoly0002s0109' => 'mpo', 'Mapoly0024s0007' => 'mpo', 'Mapoly0089s0032' => 'mpo', 'MBI04_g42241_MAGBIO' => 'mbi', 'MBI05_g11988_MAGBIO' => 'mbi', 'MBI05_g35452_MAGBIO' => 'mbi', 'MBI07_g30179_MAGBIO' => 'mbi', 'MBI07_g35859_MAGBIO' => 'mbi', 'MBI07_g35860_MAGBIO' => 'mbi', 'MBI07_g37166_MAGBIO' => 'mbi', 'MBI08_g18172_MAGBIO' => 'mbi', 'MBI09_g08441_MAGBIO' => 'mbi', 'MBI13_g01676_MAGBIO' => 'mbi', 'MBI14_g42955_MAGBIO' => 'mbi', 'MBI16_g13161_MAGBIO' => 'mbi', 'MBI17_g27204_MAGBIO' => 'mbi', 'MBI19_g21595_MAGBIO' => 'mbi', 'MD00G1148400' => 'mdo', 'MD02G1301200' => 'mdo', 'MD03G1227800' => 'mdo', 'MD05G1041100' => 'mdo', 'MD05G1124800' => 'mdo', 'MD05G1284000' => 'mdo', 'MD05G1338800' => 'mdo', 'MD05G1338900' => 'mdo', 'MD07G1022800' => 'mdo', 'MD10G1047500' => 'mdo', 'MD10G1127500' => 'mdo', 'MD10G1262300' => 'mdo', 'MD10G1293800' => 'mdo', 'MD16G1074300' => 'mdo', 'Medtr1g021670' => 'mtr', 'Medtr1g096320' => 'mtr', 'Medtr2g013690' => 'mtr', 'Medtr2g019450' => 'mtr', 'Medtr2g085170' => 'mtr', 'Medtr4g088785' => 'mtr', 'Medtr8g055930' => 'mtr', 'Medtr8g085850' => 'mtr', 'MELO3C002605.2' => 'cme', 'MELO3C003891.2' => 'cme', 'MELO3C004012.2' => 'cme', 'MELO3C007134.2' => 'cme', 'MELO3C008118.2' => 'cme', 'MELO3C016700.2' => 'cme', 'MELO3C024127.2' => 'cme', 'MELO3C033361.2' => 'cme', 'MELO3C033362.2' => 'cme', 'Migut.C00430' => 'egut', 'Migut.C01246' => 'egut', 'Migut.E00101' => 'egut', 'Migut.H01486' => 'egut', 'Migut.H01939' => 'egut', 'Migut.K00360' => 'egut', 'Migut.M00910' => 'egut', 'Migut.M01139' => 'egut', 'Migut.N02677' => 'egut', 'MSTRG.13252' => 'ama', 'MSTRG.14701' => 'ama', 'MSTRG.1521' => 'ama', 'MSTRG.15884' => 'ama', 'MSTRG.16242' => 'ama', 'MSTRG.22285' => 'ama', 'MSTRG.22444' => 'ama', 'MSTRG.2349' => 'ama', 'MSTRG.26308' => 'ama', 'MSTRG.28296' => 'ama', 'MSTRG.9895' => 'ama', 'Nitab4.5_0000110g0060' => 'nta', 'Nitab4.5_0000420g0130' => 'nta', 'Nitab4.5_0000422g0030' => 'nta', 'Nitab4.5_0000560g0180' => 'nta', 'Nitab4.5_0000703g0100' => 'nta', 'Nitab4.5_0000786g0200' => 'nta', 'Nitab4.5_0001336g0020' => 'nta', 'Nitab4.5_0001796g0030' => 'nta', 'Nitab4.5_0003348g0060' => 'nta', 'Nitab4.5_0003698g0040' => 'nta', 'Nitab4.5_0003942g0090' => 'nta', 'Nitab4.5_0004775g0070' => 'nta', 'Nitab4.5_0004864g0030' => 'nta', 'Nitab4.5_0005615g0020' => 'nta', 'Nitab4.5_0009288g0030' => 'nta', 'Nitab4.5_0009341g0010' => 'nta', 'Nitab4.5_0009535g0010' => 'nta', 'Nn1g03995' => 'nnu', 'Nn1g04100' => 'nnu', 'Nn1g06530' => 'nnu', 'Nn3g16404' => 'nnu', 'Nn3g17212' => 'nnu', 'Nn3g20776' => 'nnu', 'Nn3g21923' => 'nnu', 'Nn5g27737' => 'nnu', 'Nn5g29461' => 'nnu', 'Nn7g38355' => 'nnu', 'Nn8g39873' => 'nnu', 'Oeu000548.2' => 'oeu', 'Oeu004672.1' => 'oeu', 'Oeu015605.2' => 'oeu', 'Oeu016092.1' => 'oeu', 'Oeu017879.3' => 'oeu', 'Oeu024910.1' => 'oeu', 'Oeu028965.1' => 'oeu', 'Oeu031269.1' => 'oeu', 'Oeu031270.1' => 'oeu', 'Oeu032535.1' => 'oeu', 'Oeu034151.1' => 'oeu', 'Oeu034152.1' => 'oeu', 'Oeu034588.2' => 'oeu', 'Oeu050846.1' => 'oeu', 'Oeu050849.2' => 'oeu', 'Oeu051063.2' => 'oeu', 'Oeu052368.1' => 'oeu', 'Oeu052370.1' => 'oeu', 'Os01g0210400' => 'osa', 'Os01g0304300' => 'osa', 'Os01g0749100' => 'osa', 'Os02g0745800' => 'osa', 'Os03g0769050' => 'osa', 'Os05g0531500' => 'osa', 'Os06g0724300' => 'osa', 'Os11g0198100' => 'osa', 'Peaxi162Scf00069g01425' => 'pax', 'Peaxi162Scf00280g00811' => 'pax', 'Peaxi162Scf00310g00615' => 'pax', 'Peaxi162Scf00362g00542' => 'pax', 'Peaxi162Scf00461g00310' => 'pax', 'Peaxi162Scf00530g00118' => 'pax', 'Peaxi162Scf00541g00057' => 'pax', 'Peaxi162Scf00661g00017' => 'pax', 'Peaxi162Scf00926g00027' => 'pax', 'Peaxi162Scf01064g00263' => 'pax', 'Peaxi162Scf01211g00135' => 'pax', 'PGR004G2336' => 'pgr', 'PGR042G0327' => 'pgr', 'PGR042G1957' => 'pgr', 'PGR042G2003' => 'pgr', 'PGR042G3929' => 'pgr', 'PGR083G1137' => 'pgr', 'PGR083G1364' => 'pgr', 'PGSC0003DMG400003381' => 'stu', 'PGSC0003DMG400003417' => 'stu', 'PGSC0003DMG400008981' => 'stu', 'PGSC0003DMG400012417' => 'stu', 'PGSC0003DMG400012823' => 'stu', 'PGSC0003DMG400016885' => 'stu', 'PGSC0003DMG400022812' => 'stu', 'PGSC0003DMG400029726' => 'stu', 'PGSC0003DMG401009243' => 'stu', 'PGSC0003DMG401031505' => 'stu', 'PGSC0003DMG402031505' => 'stu', 'Phvul.001G017600' => 'pvu', 'Phvul.002G193500' => 'pvu', 'Phvul.002G228900' => 'pvu', 'Phvul.002G236800' => 'pvu', 'Phvul.003G049500' => 'pvu', 'Phvul.005G072000' => 'pvu', 'Phvul.006G164800' => 'pvu', 'Phvul.006G185100' => 'pvu', 'Phvul.007G090000' => 'pvu', 'Potri.001G399800' => 'ptr', 'Potri.002G149900' => 'ptr', 'Potri.004G044100' => 'ptr', 'Potri.004G177600' => 'ptr', 'Potri.009G138000' => 'ptr', 'Potri.010G094000' => 'ptr', 'Potri.011G053000' => 'ptr', 'Potri.011G119300' => 'ptr', 'Potri.013G113700' => 'ptr', 'Potri.018G107800' => 'ptr', 'Potri.019G084100' => 'ptr', 'Pp3c14_23720' => 'ppa', 'Pp3c16_6340' => 'ppa', 'Pp3c23_13420' => 'ppa', 'Pp3c24_2740' => 'ppa', 'Pp3c25_860' => 'ppa', 'Pp3c8_21750' => 'ppa', 'Prupe.1G273000' => 'ppe', 'Prupe.1G273700' => 'ppe', 'Prupe.1G274100' => 'ppe', 'Prupe.2G023300' => 'ppe', 'Prupe.4G048000' => 'ppe', 'Prupe.4G080400' => 'ppe', 'Prupe.4G181200' => 'ppe', 'Prupe.8G056900' => 'ppe', 'Prupe.8G168700' => 'ppe', 'Psat1g189080' => 'psa', 'Psat1g204760' => 'psa', 'Psat4g175560' => 'psa', 'Psat4g177720' => 'psa', 'Psat5g244240' => 'psa', 'Psat6g010720' => 'psa', 'Psat6g187200' => 'psa', 'Psat7g072040' => 'psa', 'PSO017G3501' => 'pso', 'PSO063G2148' => 'pso', 'PSO063G5608' => 'pso', 'PSO210G6392' => 'pso', 'PSO541G2319' => 'pso', 'PSO541G2836' => 'pso', 'PSO541G4012' => 'pso', 'PSO541G6253' => 'pso', 'PSO675G0580' => 'pso', 'PSO675G0856' => 'pso', 'PSO675G5635' => 'pso', 'PSO675G9157' => 'pso', 'PSO832G1660' => 'pso', 'PSO832G1969' => 'pso', 'QL02p007186' => 'qlo', 'QL02p033904' => 'qlo', 'QL03p064391' => 'qlo', 'QL05p040593' => 'qlo', 'QL05p058242' => 'qlo', 'QL08p021825' => 'qlo', 'QL11p004981' => 'qlo', 'RcHm_v2.0_Chr1g0318301' => 'rch', 'RcHm_v2.0_Chr4g0418501' => 'rch', 'RcHm_v2.0_Chr4g0439971' => 'rch', 'RcHm_v2.0_Chr5g0008541' => 'rch', 'RcHm_v2.0_Chr5g0014101' => 'rch', 'RcHm_v2.0_Chr5g0014131' => 'rch', 'RcHm_v2.0_Chr5g0033621' => 'rch', 'RcHm_v2.0_Chr6g0272041' => 'rch', 'RcHm_v2.0_Chr6g0278831' => 'rch', 'Rhsim02G0130400' => 'rsi', 'Rhsim02G0171100' => 'rsi', 'Rhsim05G0053000' => 'rsi', 'Rhsim05G0053100' => 'rsi', 'Rhsim06G0096500' => 'rsi', 'Rhsim06G0096600' => 'rsi', 'Rhsim06G0199100' => 'rsi', 'Rhsim12G0062300' => 'rsi', 'Rhsim12G0062800' => 'rsi', 'Sabra02G0118600' => 'sbr', 'Sabra04G0027300' => 'sbr', 'Sabra04G0119500' => 'sbr', 'Sabra08G0112500' => 'sbr', 'Sabra11G0036800' => 'sbr', 'Sabra11G0103800' => 'sbr', 'Sabra13G0096300' => 'sbr', 'Sabra16G0262300' => 'sbr', 'Sabra18G0091700' => 'sbr', 'Sabra19G0095400' => 'sbr', 'SalBow6G3080' => 'sbo', 'SalBow7G1157' => 'sbo', 'SalBow7G2123' => 'sbo', 'SalBow7G2285' => 'sbo', 'SalBow7G3537' => 'sbo', 'SalBow8G2947' => 'sbo', 'SalBow8G4463' => 'sbo', 'SalBow8G5466' => 'sbo', 'Sc01g0001750' => 'sci', 'Sc02g0006640' => 'sci', 'Sc02g0006670' => 'sci', 'Sc04g0008220' => 'sci', 'Sc05g0006190' => 'sci', 'Sc08g0002760' => 'sci', 'Sc17g0006170' => 'sci', 'Sc22g0002050' => 'sci', 'Sc23g0001190' => 'sci', 'Sc24g0000980' => 'sci', 'Sed0006245' => 'sed', 'Sed0007543' => 'sed', 'Sed0009411' => 'sed', 'Sed0010765' => 'sed', 'Sed0012944' => 'sed', 'Sed0014682' => 'sed', 'Sed0016174' => 'sed', 'Sed0016796' => 'sed', 'Sed0020317' => 'sed', 'Sed0021467' => 'sed', 'SEGI_01316' => 'sgi', 'SEGI_03374' => 'sgi', 'SEGI_16265' => 'sgi', 'SEGI_18569' => 'sgi', 'SEGI_20351' => 'sgi', 'SEGI_26395' => 'sgi', 'SEGI_29469' => 'sgi', 'SEGI_34771' => 'sgi', 'SEGI_36769' => 'sgi', 'SEGI_37139' => 'sgi', 'SGA_v2.0_scaffold100G29687' => 'sas', 'SGA_v2.0_scaffold118G32472' => 'sas', 'SGA_v2.0_scaffold14G07051' => 'sas', 'SGA_v2.0_scaffold183G39845' => 'sas', 'SGA_v2.0_scaffold1G00174' => 'sas', 'SGA_v2.0_scaffold22G09714' => 'sas', 'SGA_v2.0_scaffold333G48992' => 'sas', 'SGA_v2.0_scaffold46G17491' => 'sas', 'SGA_v2.0_scaffold49G18294' => 'sas', 'SGA_v2.0_scaffold63G21658' => 'sas', 'SHI01741' => 'shi', 'SHI05771' => 'shi', 'SHI18077' => 'shi', 'SHI20525' => 'shi', 'SHI20527' => 'shi', 'SHI20528' => 'shi', 'SMO172G0185' => 'smo', 'SMO198G0020' => 'smo', 'SMO351G0006' => 'smo', 'SMO356G0118' => 'smo', 'SMO358G0296' => 'smo', 'SMO367G0079' => 'smo', 'SMO367G1277' => 'smo', 'Solyc01g014220.3' => 'sly', 'Solyc01g111770.2' => 'sly', 'Solyc02g078180.3' => 'sly', 'Solyc03g006430.3' => 'sly', 'Solyc03g006456.1' => 'sly', 'Solyc03g079860.2' => 'sly', 'Solyc04g079770.3' => 'sly', 'Solyc05g007430.4' => 'sly', 'Solyc07g063150.3' => 'sly', 'Solyc08g016620.3' => 'sly', 'Solyc09g057590.3' => 'sly', 'Solyc09g057600.1' => 'sly', 'Solyc10g009050.3' => 'sly', 'Solyc11g017420.2' => 'sly', 'Sopen01g053810' => 'spe', 'Sopen02g023040' => 'spe', 'Sopen03g002440' => 'spe', 'Sopen04g033350' => 'spe', 'Sopen05g003310' => 'spe', 'Sopen07g004050' => 'spe', 'Sopen07g031340' => 'spe', 'Sopen08g006990' => 'spe', 'Sopen10g004830' => 'spe', 'Sopen11g009370' => 'spe', 'Sp1g24450' => 'spa', 'Sp1g29670' => 'spa', 'Sp1g39600' => 'spa', 'Sp2g11080' => 'spa', 'Sp2g13970' => 'spa', 'Sp4g16130' => 'spa', 'Sp6g13080' => 'spa', 'Sp7g37270' => 'spa', 'TAR371G0065' => 'tar', 'TAR376G0340' => 'tar', 'TAR376G0435' => 'tar', 'TAR381G0002' => 'tar', 'TAR381G1236' => 'tar', 'TAR624G0055' => 'tar', 'TAR624G0324' => 'tar', 'TAR624G0696' => 'tar', 'TAR624G0906' => 'tar', 'TAR625G0107' => 'tar', 'TAR626G0015' => 'tar', 'TAR626G1356' => 'tar', 'TAR627G0888' => 'tar', 'TAR628G0399' => 'tar', 'TAR628G1327' => 'tar', 'TAR629G2831' => 'tar', 'TAR629G2874' => 'tar', 'TAR633G1432' => 'tar', 'TAR633G2771' => 'tar', 'THA.LOC104803394' => 'tha', 'THA.LOC104805153' => 'tha', 'THA.LOC104806784' => 'tha', 'THA.LOC104810473' => 'tha', 'THA.LOC104813100' => 'tha', 'THA.LOC104814215' => 'tha', 'THA.LOC104815554' => 'tha', 'THA.LOC104820544' => 'tha', 'THA.LOC104824754' => 'tha', 'THA.LOC104827717' => 'tha', 'Thecc.02G031400' => 'tca', 'Thecc.02G055900' => 'tca', 'Thecc.02G350800' => 'tca', 'Thecc.06G150900' => 'tca', 'Thecc.06G186600' => 'tca', 'Thecc.07G089600' => 'tca', 'Thecc.08G020400' => 'tca', 'Thecc.08G182100' => 'tca', 'Thhalv10000873m.g' => 'esa', 'Thhalv10004185m.g' => 'esa', 'Thhalv10006981m.g' => 'esa', 'Thhalv10007204m.g' => 'esa', 'Thhalv10011374m.g' => 'esa', 'Thhalv10013482m.g' => 'esa', 'Thhalv10017801m.g' => 'esa', 'Thhalv10024983m.g' => 'esa', 'TPR.G12072' => 'tpr', 'TPR.G15769' => 'tpr', 'TPR.G16504' => 'tpr', 'TPR.G16506' => 'tpr', 'TPR.G24345' => 'tpr', 'TPR.G26666' => 'tpr', 'TPR.G27320' => 'tpr', 'TPR.G31819' => 'tpr', 'TPR.G38879' => 'tpr', 'TPR.G39015' => 'tpr', 'TPR.G8819' => 'tpr', 'TWI09G0924' => 'twi', 'TWI12G0811' => 'twi', 'TWI12G1294' => 'twi', 'TWI31G0150' => 'twi', 'TWI36G1262' => 'twi', 'TWI38G1287' => 'twi', 'TWI38G1633' => 'twi', 'TWI38G1982' => 'twi', 'TWI39G0116' => 'twi', 'TWI60G1011' => 'twi', 'TWI63G0171' => 'twi', 'TWI73G0839' => 'twi', 'TWI79G1511' => 'twi', 'unitig_0.g915' => 'ugi', 'unitig_0.g916' => 'ugi', 'unitig_21.g20219' => 'ugi', 'unitig_21.g20416' => 'ugi', 'unitig_578.g16132' => 'ugi', 'unitig_578.g16718' => 'ugi', 'unitig_62.g23481' => 'ugi', 'unitig_744.g24535' => 'ugi', 'unitig_749.g13525' => 'ugi', 'vmacro01248' => 'vma', 'vmacro02290' => 'vma', 'vmacro10946' => 'vma', 'vmacro11865' => 'vma', 'vmacro12493' => 'vma', 'vmacro17322' => 'vma', 'vmacro21599' => 'vma', 'vmacro23041' => 'vma', 'VMungo0251G0004' => 'vmu', 'VMungo0251G2639' => 'vmu', 'VMungo0251G2967' => 'vmu', 'VMungo0540G0864' => 'vmu', 'VMungo0540G1569' => 'vmu', 'VMungo0647G0317' => 'vmu', 'VMungo0720G1373' => 'vmu', 'VMungo0720G1508' => 'vmu', 'VMungo1080G0485' => 'vmu', 'VMungo1215G3177' => 'vmu', 'Zm00001eb112600' => 'zma', 'Zm00001eb120220' => 'zma', 'Zm00001eb153240' => 'zma', 'Zm00001eb168880' => 'zma', 'Zm00001eb213920' => 'zma', 'Zm00001eb228280' => 'zma', 'Zm00001eb254580' => 'zma', 'Zm00001eb272180' => 'zma', 'Zm00001eb293190' => 'zma', 'Zm00001eb322930' => 'zma', 'Zm00001eb353360' => 'zma', 'Zm00001eb353390' => 'zma', 'Zm00001eb353430' => 'zma', 'Zm00001eb353440' => 'zma', 'Zm00001eb353780' => 'zma' ) $gf_id = 'HOM05D000499' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000499' ) $data_identifier = 'HOM05D000499' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 29, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 12, 'amhyb' => (int) 8, 'aly' => (int) 12, 'aox' => (int) 9, 'arhy' => (int) 26, 'ath' => (int) 8, 'atr' => (int) 7, 'acertr' => (int) 10, 'cqu' => (int) 15, 'bca' => (int) 29, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 11, 'cansat' => (int) 8, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 9, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 8, 'cpa' => (int) 10, 'csa' => (int) 7, 'camsi' => (int) 20, 'dca' => (int) 8, 'din' => (int) 12, 'dzi' => (int) 14, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 6, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 38, 'gra' => (int) 16, 'vvi' => (int) 8, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 5, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 11, 'lja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 11, 'mpo' => (int) 3, 'mbi' => (int) 14, 'mdo' => (int) 14, 'mtr' => (int) 8, 'cme' => (int) 9, 'egut' => (int) 9, 'ama' => (int) 11, 'nta' => (int) 17, 'nnu' => (int) 11, 'oeu' => (int) 18, 'osa' => (int) 8, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 6, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 9, 'rsi' => (int) 9, 'sbr' => (int) 10, 'sbo' => (int) 8, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 10, 'sas' => (int) 10, 'shi' => (int) 6, 'smo' => (int) 7, 'sly' => (int) 14, 'spe' => (int) 10, 'spa' => (int) 8, 'tar' => (int) 19, 'tha' => (int) 10, 'tca' => (int) 8, 'esa' => (int) 8, 'tpr' => (int) 11, 'twi' => (int) 13, 'ugi' => (int) 9, 'vma' => (int) 8, 'vmu' => (int) 10, 'zma' => (int) 15 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb353780' $species_info = array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ) $local_species = 'gra' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000499', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1066', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p29780' => 'bna', 'A02p33180' => 'bna', 'A03p16470' => 'bna', 'A03p66010' => 'bna', 'A04p25970' => 'bna', 'A06p01270' => 'bna', 'A06p46080' => 'bna', 'A07p11400' => 'bna', 'A08p01840' => 'bna', 'A08p08230' => 'bna', 'A08p25740' => 'bna', 'A09p32070' => 'bna', 'A09p37830' => 'bna', 'A09p42840' => 'bna', 'A09p42850' => 'bna', 'Aa31LG10G2060' => 'aar', 'Aa31LG2G7410' => 'aar', 'Aa31LG6G10200' => 'aar', 'Aa31LG6G16680' => 'aar', 'Aa31LG6G8470' => 'aar', 'Aa31LG9G12730' => 'aar', 'Aa31LG9G13680' => 'aar', 'Aa31LG9G14920' => 'aar', 'Aa31LG9G6650' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4977' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5467' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3254' => 'aag', 'Actinidia02578' => 'ach', 'Actinidia07693' => 'ach', 'Actinidia08413' => 'ach', 'Actinidia08414' => 'ach', 'Actinidia15289' => 'ach', 'Actinidia19871' => 'ach', 'Actinidia21475' => 'ach', 'Actinidia22576' => 'ach', 'Actinidia28327' => 'ach', 'Actinidia32491' => 'ach', 'Actinidia39463' => 'ach', 'Actinidia39571' => 'ach', 'Ah.01g013750' => 'amhyb', 'Ah.01g023210' => 'amhyb', 'Ah.04g164850' => 'amhyb', 'Ah.05g178060' => 'amhyb', 'Ah.07g204270' => 'amhyb', 'Ah.07g208480' => 'amhyb', 'Ah.09g237410' => 'amhyb', 'Ah.14g089460' => 'amhyb', 'AL1G41790' => 'aly', 'AL1G49050' => 'aly', 'AL1G53810' => 'aly', 'AL1G61400' => 'aly', 'AL4G18580' => 'aly', 'AL5G12510' => 'aly', 'AL5G12540' => 'aly', 'AL6G43230' => 'aly', 'AL7G10370' => 'aly', 'AL7G19250' => 'aly', 'AL8G12240' => 'aly', 'AL8G18540' => 'aly', 'Aqoxy1G02409' => 'aox', 'Aqoxy2G03993' => 'aox', 'Aqoxy3G03357' => 'aox', 'Aqoxy4G00785' => 'aox', 'Aqoxy5G02598' => 'aox', 'Aqoxy6G00132' => 'aox', 'Aqoxy7G01776' => 'aox', 'Aqoxy7G02316' => 'aox', 'Aqoxy7G03973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.12AFKW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B8730' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27IQR1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3F75VG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3RE0GA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41TCQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.527VTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FIR39' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5W8UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DA38EV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ63HS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H1I32C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HC27T5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4M8AP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7N3CZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9UVDZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LS1NQA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT1D4B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SKC4TM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCFV76' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF9Q1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQWD9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1ZM88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WE07RT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YCK7VH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJE6Q6' => 'arhy', 'AT1G28240' => 'ath', 'AT1G34550' => 'ath', 'AT1G53040' => 'ath', 'AT2G02910' => 'ath', 'AT4G09630' => 'ath', 'AT4G38500' => 'ath', 'AT5G42660' => 'ath', 'AT5G46220' => 'ath', 'ATR0152G026' => 'atr', 'ATR0564G343' => 'atr', 'ATR0706G151' => 'atr', 'ATR0733G207' => 'atr', 'ATR0751G234' => 'atr', 'ATR0807G048' => 'atr', 'ATR1091G084' => 'atr', 'Atru.chr10.1229' => 'acertr', 'Atru.chr10.1230' => 'acertr', 'Atru.chr10.1874' => 'acertr', 'Atru.chr11.1808' => 'acertr', 'Atru.chr13.1795' => 'acertr', 'Atru.chr13.570' => 'acertr', 'Atru.chr2.2608' => 'acertr', 'Atru.chr2.2609' => 'acertr', 'Atru.chr5.3428' => 'acertr', 'Atru.chr8.1171' => 'acertr', 'AUR62004651' => 'cqu', 'AUR62008675' => 'cqu', 'AUR62010014' => 'cqu', 'AUR62013004' => 'cqu', 'AUR62014825' => 'cqu', 'AUR62015015' => 'cqu', 'AUR62015151' => 'cqu', 'AUR62017020' => 'cqu', 'AUR62019422' => 'cqu', 'AUR62023570' => 'cqu', 'AUR62025571' => 'cqu', 'AUR62029098' => 'cqu', 'AUR62033863' => 'cqu', 'AUR62034296' => 'cqu', 'AUR62040075' => 'cqu', 'BcaB02g07334' => 'bca', 'BcaB02g10575' => 'bca', 'BcaB03g12119' => 'bca', 'BcaB03g12120' => 'bca', 'BcaB03g13945' => 'bca', 'BcaB04g17123' => 'bca', 'BcaB04g17867' => 'bca', 'BcaB04g19839' => 'bca', 'BcaB07g30317' => 'bca', 'BcaB07g32432' => 'bca', 'BcaB07g33362' => 'bca', 'BcaB08g36611' => 'bca', 'BcaC01g00028' => 'bca', 'BcaC01g01356' => 'bca', 'BcaC01g02034' => 'bca', 'BcaC01g06051' => 'bca', 'BcaC03g16839' => 'bca', 'BcaC03g17176' => 'bca', 'BcaC05g26829' => 'bca', 'BcaC06g31490' => 'bca', 'BcaC06g35344' => 'bca', 'BcaC06g36570' => 'bca', 'BcaC07g37537' => 'bca', 'BcaC08g43491' => 'bca', 'BcaC08g43773' => 'bca', 'BcaNung00234' => 'bca', 'BcaNung01982' => 'bca', 'BcaNung03707' => 'bca', 'BcaNung06454' => 'bca', 'BolC2t10762H' => 'bol', 'BolC2t11191H' => 'bol', 'BolC3t14322H' => 'bol', 'BolC3t19747H' => 'bol', 'BolC3t21425H' => 'bol', 'BolC4t27800H' => 'bol', 'BolC5t31423H' => 'bol', 'BolC6t35951H' => 'bol', 'BolC6t36282H' => 'bol', 'BolC7t40678H' => 'bol', 'BolC7t40679H' => 'bol', 'BolC7t42222H' => 'bol', 'BolC7t43492H' => 'bol', 'BolC7t46785H' => 'bol', 'BolC8t47853H' => 'bol', 'BolC9t56805H' => 'bol', 'BraA02t08000Z' => 'bra', 'BraA02t08341Z' => 'bra', 'BraA03t10936Z' => 'bra', 'BraA03t15657Z' => 'bra', 'BraA04t18100Z' => 'bra', 'BraA05t20523Z' => 'bra', 'BraA06t23353Z' => 'bra', 'BraA06t27473Z' => 'bra', 'BraA06t27769Z' => 'bra', 'BraA07t28928Z' => 'bra', 'BraA08t32236Z' => 'bra', 'BraA08t32841Z' => 'bra', 'BraA08t34524Z' => 'bra', 'BraA09t38742Z' => 'bra', 'BraA09t39295Z' => 'bra', 'C02p47180' => 'bna', 'C02p50990' => 'bna', 'C03p19360' => 'bna', 'C03p74950' => 'bna', 'C03p91000' => 'bna', 'C04p63260' => 'bna', 'C05p27050' => 'bna', 'C06p08750' => 'bna', 'C06p11490' => 'bna', 'C07p02820' => 'bna', 'C07p17180' => 'bna', 'C07p29440' => 'bna', 'C07p63730' => 'bna', 'C09p39260' => 'bna', 'CAN.G1164.34' => 'can', 'CAN.G1164.39' => 'can', 'CAN.G1530.3' => 'can', 'CAN.G162.61' => 'can', 'CAN.G176.6' => 'can', 'CAN.G289.49' => 'can', 'CAN.G370.21' => 'can', 'CAN.G370.22' => 'can', 'CAN.G371.117' => 'can', 'CAN.G58.37' => 'can', 'CAN.G588.98' => 'can', 'CANSAT21G2266' => 'cansat', 'CANSAT25G2799' => 'cansat', 'CANSAT35G0862' => 'cansat', 'CANSAT35G1704' => 'cansat', 'CANSAT35G1760' => 'cansat', 'CANSAT56G3971' => 'cansat', 'CANSAT56G4116' => 'cansat', 'CANSAT80G1259' => 'cansat', 'CARHR027730' => 'chi', 'CARHR033880' => 'chi', 'CARHR043270' => 'chi', 'CARHR145330' => 'chi', 'CARHR145340' => 'chi', 'CARHR175570' => 'chi', 'CARHR181570' => 'chi', 'CARHR258470' => 'chi', 'CARHR260490' => 'chi', 'CARHR294220' => 'chi', 'Carub.0001s2668' => 'cru', 'Carub.0001s3257' => 'cru', 'Carub.0001s4220' => 'cru', 'Carub.0005s0179' => 'cru', 'Carub.0006s2807' => 'cru', 'Carub.0007s0039' => 'cru', 'Carub.0008s0169' => 'cru', 'Carub.0008s0636' => 'cru', 'Ca_00338_v3' => 'car', 'Ca_00542_v3' => 'car', 'Ca_01844_v3' => 'car', 'Ca_10611_v3' => 'car', 'Ca_13326_v3' => 'car', 'Ca_17944_v3' => 'car', 'Ca_18546_v3' => 'car', 'Ca_24219_v3' => 'car', 'Ca_29972_v3' => 'car', 'CBR_g3681' => 'cbr', 'CBR_g40021' => 'cbr', 'Cc01_g08140' => 'ccan', 'Cc02_g13410' => 'ccan', 'Cc02_g37480' => 'ccan', 'Cc05_g12030' => 'ccan', 'Cc09_g03370' => 'ccan', 'Cc09_g10300' => 'ccan', 'Cc10_g03530' => 'ccan', 'Cc10_g11380' => 'ccan', 'CDE01G0176' => 'cde', 'CDE02G0675' => 'cde', 'CDE02G0942' => 'cde', 'CDE02G1153' => 'cde', 'CDE02G4177' => 'cde', 'CDE04G2117' => 'cde', 'CDE04G2736' => 'cde', 'CDE08G1161' => 'cde', 'CDE09G1238' => 'cde', 'Cfa000467' => 'cfa', 'Cfa000947' => 'cfa', 'Cfa004969' => 'cfa', 'Cfa005284' => 'cfa', 'Cfa008993' => 'cfa', 'Cfa018187' => 'cfa', 'Cfa018454' => 'cfa', 'Cfa020585' => 'cfa', 'Ciclev10000424m.g' => 'ccl', 'Ciclev10003605m.g' => 'ccl', 'Ciclev10007828m.g' => 'ccl', 'Ciclev10014620m.g' => 'ccl', 'Ciclev10015169m.g' => 'ccl', 'Ciclev10018291m.g' => 'ccl', 'Ciclev10028256m.g' => 'ccl', 'Ciclev10033822m.g' => 'ccl', 'CiPaw.05G060300' => 'cil', 'CiPaw.05G085000' => 'cil', 'CiPaw.06G083700' => 'cil', 'CiPaw.06G120300' => 'cil', 'CiPaw.09G060500' => 'cil', 'CiPaw.09G123800' => 'cil', 'CiPaw.11G169700' => 'cil', 'CiPaw.12G118300' => 'cil', 'CiPaw.15G071000' => 'cil', 'CiPaw.15G081900' => 'cil', 'ClCG01G024610' => 'cla', 'ClCG03G006070' => 'cla', 'ClCG05G019250' => 'cla', 'ClCG09G009500' => 'cla', 'ClCG11G008200' => 'cla', 'ClCG11G018080' => 'cla', 'COL.COLO4_17373' => 'col', 'COL.COLO4_22994' => 'col', 'COL.COLO4_26389' => 'col', 'COL.COLO4_27170' => 'col', 'COL.COLO4_31074' => 'col', 'COL.COLO4_31465' => 'col', 'COL.COLO4_36438' => 'col', 'COL.COLO4_36439' => 'col', 'Cpa.g.c38781' => 'cpa', 'Cpa.g.sc128.12' => 'cpa', 'Cpa.g.sc166.7' => 'cpa', 'Cpa.g.sc166.8' => 'cpa', 'Cpa.g.sc20.111' => 'cpa', 'Cpa.g.sc27.31' => 'cpa', 'Cpa.g.sc64.36' => 'cpa', 'Cpa.g.sc64.37' => 'cpa', 'Cpa.g.sc66.49' => 'cpa', 'Cpa.g.sc80.64' => 'cpa', 'CsaV3_1G012320' => 'csa', 'CsaV3_2G008480' => 'csa', 'CsaV3_2G033450' => 'csa', 'CsaV3_3G044830' => 'csa', 'CsaV3_4G033710' => 'csa', 'CsaV3_6G051730' => 'csa', 'CsaV3_7G025350' => 'csa', 'CSS0001067' => 'camsi', 'CSS0005996' => 'camsi', 'CSS0006590' => 'camsi', 'CSS0009673' => 'camsi', 'CSS0010201' => 'camsi', 'CSS0010549' => 'camsi', 'CSS0011364' => 'camsi', 'CSS0014473' => 'camsi', 'CSS0014961' => 'camsi', 'CSS0020191' => 'camsi', 'CSS0021165' => 'camsi', 'CSS0022306' => 'camsi', 'CSS0030591' => 'camsi', 'CSS0030696' => 'camsi', 'CSS0032653' => 'camsi', 'CSS0037487' => 'camsi', 'CSS0041102' => 'camsi', 'CSS0041261' => 'camsi', 'CSS0046246' => 'camsi', 'CSS0049256' => 'camsi', 'DCAR_004075' => 'dca', 'DCAR_011538' => 'dca', 'DCAR_019553' => 'dca', 'DCAR_020952' => 'dca', 'DCAR_021739' => 'dca', 'DCAR_027407' => 'dca', 'DCAR_027913' => 'dca', 'DCAR_028066' => 'dca', 'Dinv05899' => 'din', 'Dinv07563' => 'din', 'Dinv08010' => 'din', 'Dinv14125' => 'din', 'Dinv20172' => 'din', 'Dinv30743' => 'din', 'Dinv31229' => 'din', 'Dinv34162' => 'din', 'Dinv36028' => 'din', 'Dinv39368' => 'din', 'Dinv40565' => 'din', 'Dinv41706' => 'din', 'Duzib052G0089' => 'dzi', 'Duzib116G0641' => 'dzi', 'Duzib132G0069' => 'dzi', 'Duzib132G1219' => 'dzi', 'Duzib147G0278' => 'dzi', 'Duzib160G0480' => 'dzi', 'Duzib170G0661' => 'dzi', 'Duzib177G0591' => 'dzi', 'Duzib187G1353' => 'dzi', 'Duzib192G0858' => 'dzi', 'Duzib192G0883' => 'dzi', 'Duzib213G0506' => 'dzi', 'Duzib235G0289' => 'dzi', 'Duzib251G0422' => 'dzi', 'ECA232G3898' => 'eca', 'ECA233G5950' => 'eca', 'ECA234G1699' => 'eca', 'ECA234G2421' => 'eca', 'ECA236G0426' => 'eca', 'ECA236G4331' => 'eca', 'ECA248G2573' => 'eca', 'EL10Ac1g00077' => 'bvu', 'EL10Ac1g01746' => 'bvu', 'EL10Ac2g03464' => 'bvu', 'EL10Ac4g08176' => 'bvu', 'EL10Ac7g17521' => 'bvu', 'EL10Ac8g20386' => 'bvu', 'EL10Ac9g21343' => 'bvu', 'EL10Ac9g22688' => 'bvu', 'Eucgr.B03434' => 'egr', 'Eucgr.D00618' => 'egr', 'Eucgr.E02395' => 'egr', 'Eucgr.F01129' => 'egr', 'Eucgr.F02622' => 'egr', 'Eucgr.F04207' => 'egr', 'FAN01G0570' => 'fan', 'FAN03G3351' => 'fan', 'FAN06G3702' => 'fan', 'FAN07G2149' => 'fan', 'FAN10G3758' => 'fan', 'FAN11G1170' => 'fan', 'FAN11G2050' => 'fan', 'FAN11G2724' => 'fan', 'FAN12G1700' => 'fan', 'FAN12G2028' => 'fan', 'FAN15G1160' => 'fan', 'FAN15G3063' => 'fan', 'FAN16G2540' => 'fan', 'FAN16G3077' => 'fan', 'FAN16G3624' => 'fan', 'FAN17G0221' => 'fan', 'FAN20G2492' => 'fan', 'FAN20G2905' => 'fan', 'FAN21G0548' => 'fan', 'FAN21G1300' => 'fan', 'FAN22G0077' => 'fan', 'FAN22G1315' => 'fan', 'FAN24G1280' => 'fan', 'FAN24G1445' => 'fan', 'FAN24G3527' => 'fan', 'FAN25G0464' => 'fan', 'FAN25G2885' => 'fan', 'FAN25G3270' => 'fan', 'FAN27G1101' => 'fan', 'FAN27G2846' => 'fan', 'FAN27G3524' => 'fan', 'FvH4_2g11770' => 'fve', 'FvH4_2g15630' => 'fve', 'FvH4_3g05570' => 'fve', 'FvH4_3g09110' => 'fve', 'FvH4_3g19940' => 'fve', 'FvH4_4g04821' => 'fve', 'FvH4_4g31480' => 'fve', 'FvH4_7g01740' => 'fve', 'Glyma.05G130400' => 'gma', 'Glyma.05G156400' => 'gma', 'Glyma.07G197000' => 'gma', 'Glyma.08G085151' => 'gma', 'Glyma.08G114500' => 'gma', 'Glyma.08G300400' => 'gma', 'Glyma.10G215800' => 'gma', 'Glyma.12G224400' => 'gma', 'Glyma.13G179300' => 'gma', 'Glyma.13G218151' => 'gma', 'Glyma.13G238800' => 'gma', 'Glyma.13G276900' => 'gma', 'Glyma.14G078200' => 'gma', 'Glyma.15G074500' => 'gma', 'Glyma.15G094100' => 'gma', 'Glyma.17G247200' => 'gma', 'Glyma.18G120100' => 'gma', 'Glyma.20G176000' => 'gma', 'Gohir.A01G063600' => 'ghi', 'Gohir.A01G170301' => 'ghi', 'Gohir.A02G060500' => 'ghi', 'Gohir.A05G133850' => 'ghi', 'Gohir.A05G161400' => 'ghi', 'Gohir.A06G012900' => 'ghi', 'Gohir.A06G035901' => 'ghi', 'Gohir.A06G127100' => 'ghi', 'Gohir.A06G210500' => 'ghi', 'Gohir.A08G008650' => 'ghi', 'Gohir.A09G072700' => 'ghi', 'Gohir.A09G088301' => 'ghi', 'Gohir.A10G040600' => 'ghi', 'Gohir.A12G036300' => 'ghi', 'Gohir.A12G143350' => 'ghi', 'Gohir.A12G165500' => 'ghi', 'Gohir.A13G145700' => 'ghi', 'Gohir.D01G050000' => 'ghi', 'Gohir.D01G051366' => 'ghi', 'Gohir.D01G161350' => 'ghi', 'Gohir.D02G065900' => 'ghi', 'Gohir.D05G164200' => 'ghi', 'Gohir.D05G355500' => 'ghi', 'Gohir.D06G010400' => 'ghi', 'Gohir.D06G111250' => 'ghi', 'Gohir.D06G132000' => 'ghi', 'Gohir.D06G210500' => 'ghi', 'Gohir.D07G165675' => 'ghi', 'Gohir.D08G062240' => 'ghi', 'Gohir.D08G086101' => 'ghi', 'Gohir.D08G138060' => 'ghi', 'Gohir.D09G072300' => 'ghi', 'Gohir.D10G041400' => 'ghi', 'Gohir.D11G191020' => 'ghi', 'Gohir.D11G212066' => 'ghi', 'Gohir.D12G036300' => 'ghi', 'Gohir.D12G168600' => 'ghi', 'Gohir.D13G150600' => 'ghi', 'Gorai.001G057300' => 'gra', 'Gorai.002G069900' => 'gra', 'Gorai.002G200000' => 'gra', 'Gorai.003G067600' => 'gra', 'Gorai.005G074800' => 'gra', 'Gorai.006G087300' => 'gra', 'Gorai.008G037500' => 'gra', 'Gorai.008G181400' => 'gra', 'Gorai.009G169400' => 'gra', 'Gorai.009G387900' => 'gra', 'Gorai.010G013300' => 'gra', 'Gorai.010G153800' => 'gra', 'Gorai.010G255800' => 'gra', 'Gorai.011G043700' => 'gra', 'Gorai.011G198900' => 'gra', 'Gorai.013G168400' => 'gra', 'GSVIVG01005212001' => 'vvi', 'GSVIVG01006163001' => 'vvi', 'GSVIVG01009625001' => 'vvi', 'GSVIVG01014338001' => 'vvi', 'GSVIVG01020005001' => 'vvi', 'GSVIVG01021450001' => 'vvi', 'GSVIVG01023975001' => 'vvi', 'GSVIVG01034490001' => 'vvi', 'HanXRQChr04g0112071' => 'han', 'HanXRQChr05g0131151' => 'han', 'HanXRQChr09g0262371' => 'han', 'HanXRQChr09g0268401' => 'han', 'HanXRQChr10g0279241' => 'han', 'HanXRQChr10g0297961' => 'han', 'HanXRQChr11g0326231' => 'han', 'HanXRQChr11g0328471' => 'han', 'HanXRQChr16g0507941' => 'han', 'HanXRQChr17g0560211' => 'han', 'Haze_02108' => 'cav', 'Haze_02428' => 'cav', 'Haze_05593' => 'cav', 'Haze_06448' => 'cav', 'Haze_09427' => 'cav', 'Haze_12022' => 'cav', 'Haze_17612' => 'cav', 'Haze_17928' => 'cav', 'Hma1.2p1_0032F.1_g019250' => 'hma', 'Hma1.2p1_0163F.1_g072690' => 'hma', 'Hma1.2p1_0265F.1_g106710' => 'hma', 'Hma1.2p1_0286F.1_g113970' => 'hma', 'Hma1.2p1_0363F.1_g136640' => 'hma', 'Hma1.2p1_0584F.1_g183470' => 'hma', 'Hma1.2p1_0885F.1_g232570' => 'hma', 'HPP92_006022' => 'vpl', 'HPP92_007320' => 'vpl', 'HPP92_011521' => 'vpl', 'HPP92_019387' => 'vpl', 'HPP92_024038' => 'vpl', 'Hund05891' => 'sun', 'Hund06450' => 'sun', 'Hund12053' => 'sun', 'Hund16800' => 'sun', 'Hund21222' => 'sun', 'Hund22896' => 'sun', 'Hund23746' => 'sun', 'Hund27083' => 'sun', 'Lalb_Chr02g0141831' => 'lal', 'Lalb_Chr02g0141841' => 'lal', 'Lalb_Chr05g0220411' => 'lal', 'Lalb_Chr06g0162081' => 'lal', 'Lalb_Chr09g0327651' => 'lal', 'Lalb_Chr13g0295051' => 'lal', 'Lalb_Chr15g0086801' => 'lal', 'Lalb_Chr16g0383781' => 'lal', 'Lalb_Chr16g0383791' => 'lal', 'Lalb_Chr18g0055441' => 'lal', 'Lalb_Chr18g0059611' => 'lal', 'Lalb_Chr20g0109661' => 'lal', 'Lalb_Chr20g0109831' => 'lal', 'Lalb_Chr20g0121871' => 'lal', 'Lalb_Chr22g0355361' => 'lal', 'Lalb_Chr25g0286371' => 'lal', 'Lj1A1187G43' => 'lonja', 'Lj1A1205T50' => 'lonja', 'Lj1A800G33' => 'lonja', 'Lj1C1187T7' => 'lonja', 'Lj1C843T11' => 'lonja', 'Lj1g0010940' => 'lja', 'Lj2A288T69' => 'lonja', 'Lj3g0024276' => 'lja', 'Lj4A47T76' => 'lonja', 'Lj4g0005805' => 'lja', 'Lj4g0006097' => 'lja', 'Lj4g0008528' => 'lja', 'Lj4g0024907' => 'lja', 'Lj5g0012472' => 'lja', 'Lj5g0018648' => 'lja', 'Lj6C789G1' => 'lonja', 'Lj6g0004000' => 'lja', 'Lj7A292G67' => 'lonja', 'Lj7A292T64' => 'lonja', 'Lj9A400T58' => 'lonja', 'Lsat_1_v5_gn_1_126181' => 'lsa', 'Lsat_1_v5_gn_4_123041' => 'lsa', 'Lsat_1_v5_gn_4_133620' => 'lsa', 'Lsat_1_v5_gn_4_53221' => 'lsa', 'Lsat_1_v5_gn_4_71961' => 'lsa', 'Lsat_1_v5_gn_7_105241' => 'lsa', 'Lsat_1_v5_gn_7_21361' => 'lsa', 'Lsat_1_v5_gn_7_28860' => 'lsa', 'Lsat_1_v5_gn_7_31260' => 'lsa', 'Lsat_1_v5_gn_8_52801' => 'lsa', 'Manes.02G191400' => 'mes', 'Manes.03G110100' => 'mes', 'Manes.04G071100' => 'mes', 'Manes.05G100500' => 'mes', 'Manes.05G164700' => 'mes', 'Manes.15G087000' => 'mes', 'Manes.15G121500' => 'mes', 'Manes.16G028300' => 'mes', 'Manes.17G046100' => 'mes', 'Manes.17G069800' => 'mes', 'Manes.18G100500' => 'mes', 'Mapoly0002s0109' => 'mpo', 'Mapoly0024s0007' => 'mpo', 'Mapoly0089s0032' => 'mpo', 'MBI04_g42241_MAGBIO' => 'mbi', 'MBI05_g11988_MAGBIO' => 'mbi', 'MBI05_g35452_MAGBIO' => 'mbi', 'MBI07_g30179_MAGBIO' => 'mbi', 'MBI07_g35859_MAGBIO' => 'mbi', 'MBI07_g35860_MAGBIO' => 'mbi', 'MBI07_g37166_MAGBIO' => 'mbi', 'MBI08_g18172_MAGBIO' => 'mbi', 'MBI09_g08441_MAGBIO' => 'mbi', 'MBI13_g01676_MAGBIO' => 'mbi', 'MBI14_g42955_MAGBIO' => 'mbi', 'MBI16_g13161_MAGBIO' => 'mbi', 'MBI17_g27204_MAGBIO' => 'mbi', 'MBI19_g21595_MAGBIO' => 'mbi', 'MD00G1148400' => 'mdo', 'MD02G1301200' => 'mdo', 'MD03G1227800' => 'mdo', 'MD05G1041100' => 'mdo', 'MD05G1124800' => 'mdo', 'MD05G1284000' => 'mdo', 'MD05G1338800' => 'mdo', 'MD05G1338900' => 'mdo', 'MD07G1022800' => 'mdo', 'MD10G1047500' => 'mdo', 'MD10G1127500' => 'mdo', 'MD10G1262300' => 'mdo', 'MD10G1293800' => 'mdo', 'MD16G1074300' => 'mdo', 'Medtr1g021670' => 'mtr', 'Medtr1g096320' => 'mtr', 'Medtr2g013690' => 'mtr', 'Medtr2g019450' => 'mtr', 'Medtr2g085170' => 'mtr', 'Medtr4g088785' => 'mtr', 'Medtr8g055930' => 'mtr', 'Medtr8g085850' => 'mtr', 'MELO3C002605.2' => 'cme', 'MELO3C003891.2' => 'cme', 'MELO3C004012.2' => 'cme', 'MELO3C007134.2' => 'cme', 'MELO3C008118.2' => 'cme', 'MELO3C016700.2' => 'cme', 'MELO3C024127.2' => 'cme', 'MELO3C033361.2' => 'cme', 'MELO3C033362.2' => 'cme', 'Migut.C00430' => 'egut', 'Migut.C01246' => 'egut', 'Migut.E00101' => 'egut', 'Migut.H01486' => 'egut', 'Migut.H01939' => 'egut', 'Migut.K00360' => 'egut', 'Migut.M00910' => 'egut', 'Migut.M01139' => 'egut', 'Migut.N02677' => 'egut', 'MSTRG.13252' => 'ama', 'MSTRG.14701' => 'ama', 'MSTRG.1521' => 'ama', 'MSTRG.15884' => 'ama', 'MSTRG.16242' => 'ama', 'MSTRG.22285' => 'ama', 'MSTRG.22444' => 'ama', 'MSTRG.2349' => 'ama', 'MSTRG.26308' => 'ama', 'MSTRG.28296' => 'ama', 'MSTRG.9895' => 'ama', 'Nitab4.5_0000110g0060' => 'nta', 'Nitab4.5_0000420g0130' => 'nta', 'Nitab4.5_0000422g0030' => 'nta', 'Nitab4.5_0000560g0180' => 'nta', 'Nitab4.5_0000703g0100' => 'nta', 'Nitab4.5_0000786g0200' => 'nta', 'Nitab4.5_0001336g0020' => 'nta', 'Nitab4.5_0001796g0030' => 'nta', 'Nitab4.5_0003348g0060' => 'nta', 'Nitab4.5_0003698g0040' => 'nta', 'Nitab4.5_0003942g0090' => 'nta', 'Nitab4.5_0004775g0070' => 'nta', 'Nitab4.5_0004864g0030' => 'nta', 'Nitab4.5_0005615g0020' => 'nta', 'Nitab4.5_0009288g0030' => 'nta', 'Nitab4.5_0009341g0010' => 'nta', 'Nitab4.5_0009535g0010' => 'nta', 'Nn1g03995' => 'nnu', 'Nn1g04100' => 'nnu', 'Nn1g06530' => 'nnu', 'Nn3g16404' => 'nnu', 'Nn3g17212' => 'nnu', 'Nn3g20776' => 'nnu', 'Nn3g21923' => 'nnu', 'Nn5g27737' => 'nnu', 'Nn5g29461' => 'nnu', 'Nn7g38355' => 'nnu', 'Nn8g39873' => 'nnu', 'Oeu000548.2' => 'oeu', 'Oeu004672.1' => 'oeu', 'Oeu015605.2' => 'oeu', 'Oeu016092.1' => 'oeu', 'Oeu017879.3' => 'oeu', 'Oeu024910.1' => 'oeu', 'Oeu028965.1' => 'oeu', 'Oeu031269.1' => 'oeu', 'Oeu031270.1' => 'oeu', 'Oeu032535.1' => 'oeu', 'Oeu034151.1' => 'oeu', 'Oeu034152.1' => 'oeu', 'Oeu034588.2' => 'oeu', 'Oeu050846.1' => 'oeu', 'Oeu050849.2' => 'oeu', 'Oeu051063.2' => 'oeu', 'Oeu052368.1' => 'oeu', 'Oeu052370.1' => 'oeu', 'Os01g0210400' => 'osa', 'Os01g0304300' => 'osa', 'Os01g0749100' => 'osa', 'Os02g0745800' => 'osa', 'Os03g0769050' => 'osa', 'Os05g0531500' => 'osa', 'Os06g0724300' => 'osa', 'Os11g0198100' => 'osa', 'Peaxi162Scf00069g01425' => 'pax', 'Peaxi162Scf00280g00811' => 'pax', 'Peaxi162Scf00310g00615' => 'pax', 'Peaxi162Scf00362g00542' => 'pax', 'Peaxi162Scf00461g00310' => 'pax', 'Peaxi162Scf00530g00118' => 'pax', 'Peaxi162Scf00541g00057' => 'pax', 'Peaxi162Scf00661g00017' => 'pax', 'Peaxi162Scf00926g00027' => 'pax', 'Peaxi162Scf01064g00263' => 'pax', 'Peaxi162Scf01211g00135' => 'pax', 'PGR004G2336' => 'pgr', 'PGR042G0327' => 'pgr', 'PGR042G1957' => 'pgr', 'PGR042G2003' => 'pgr', 'PGR042G3929' => 'pgr', 'PGR083G1137' => 'pgr', 'PGR083G1364' => 'pgr', 'PGSC0003DMG400003381' => 'stu', 'PGSC0003DMG400003417' => 'stu', 'PGSC0003DMG400008981' => 'stu', 'PGSC0003DMG400012417' => 'stu', 'PGSC0003DMG400012823' => 'stu', 'PGSC0003DMG400016885' => 'stu', 'PGSC0003DMG400022812' => 'stu', 'PGSC0003DMG400029726' => 'stu', 'PGSC0003DMG401009243' => 'stu', 'PGSC0003DMG401031505' => 'stu', 'PGSC0003DMG402031505' => 'stu', 'Phvul.001G017600' => 'pvu', 'Phvul.002G193500' => 'pvu', 'Phvul.002G228900' => 'pvu', 'Phvul.002G236800' => 'pvu', 'Phvul.003G049500' => 'pvu', 'Phvul.005G072000' => 'pvu', 'Phvul.006G164800' => 'pvu', 'Phvul.006G185100' => 'pvu', 'Phvul.007G090000' => 'pvu', 'Potri.001G399800' => 'ptr', 'Potri.002G149900' => 'ptr', 'Potri.004G044100' => 'ptr', 'Potri.004G177600' => 'ptr', 'Potri.009G138000' => 'ptr', 'Potri.010G094000' => 'ptr', 'Potri.011G053000' => 'ptr', 'Potri.011G119300' => 'ptr', 'Potri.013G113700' => 'ptr', 'Potri.018G107800' => 'ptr', 'Potri.019G084100' => 'ptr', 'Pp3c14_23720' => 'ppa', 'Pp3c16_6340' => 'ppa', 'Pp3c23_13420' => 'ppa', 'Pp3c24_2740' => 'ppa', 'Pp3c25_860' => 'ppa', 'Pp3c8_21750' => 'ppa', 'Prupe.1G273000' => 'ppe', 'Prupe.1G273700' => 'ppe', 'Prupe.1G274100' => 'ppe', 'Prupe.2G023300' => 'ppe', 'Prupe.4G048000' => 'ppe', 'Prupe.4G080400' => 'ppe', 'Prupe.4G181200' => 'ppe', 'Prupe.8G056900' => 'ppe', 'Prupe.8G168700' => 'ppe', 'Psat1g189080' => 'psa', 'Psat1g204760' => 'psa', 'Psat4g175560' => 'psa', 'Psat4g177720' => 'psa', 'Psat5g244240' => 'psa', 'Psat6g010720' => 'psa', 'Psat6g187200' => 'psa', 'Psat7g072040' => 'psa', 'PSO017G3501' => 'pso', 'PSO063G2148' => 'pso', 'PSO063G5608' => 'pso', 'PSO210G6392' => 'pso', 'PSO541G2319' => 'pso', 'PSO541G2836' => 'pso', 'PSO541G4012' => 'pso', 'PSO541G6253' => 'pso', 'PSO675G0580' => 'pso', 'PSO675G0856' => 'pso', 'PSO675G5635' => 'pso', 'PSO675G9157' => 'pso', 'PSO832G1660' => 'pso', 'PSO832G1969' => 'pso', 'QL02p007186' => 'qlo', 'QL02p033904' => 'qlo', 'QL03p064391' => 'qlo', 'QL05p040593' => 'qlo', 'QL05p058242' => 'qlo', 'QL08p021825' => 'qlo', 'QL11p004981' => 'qlo', 'RcHm_v2.0_Chr1g0318301' => 'rch', 'RcHm_v2.0_Chr4g0418501' => 'rch', 'RcHm_v2.0_Chr4g0439971' => 'rch', 'RcHm_v2.0_Chr5g0008541' => 'rch', 'RcHm_v2.0_Chr5g0014101' => 'rch', 'RcHm_v2.0_Chr5g0014131' => 'rch', 'RcHm_v2.0_Chr5g0033621' => 'rch', 'RcHm_v2.0_Chr6g0272041' => 'rch', 'RcHm_v2.0_Chr6g0278831' => 'rch', 'Rhsim02G0130400' => 'rsi', 'Rhsim02G0171100' => 'rsi', 'Rhsim05G0053000' => 'rsi', 'Rhsim05G0053100' => 'rsi', 'Rhsim06G0096500' => 'rsi', 'Rhsim06G0096600' => 'rsi', 'Rhsim06G0199100' => 'rsi', 'Rhsim12G0062300' => 'rsi', 'Rhsim12G0062800' => 'rsi', 'Sabra02G0118600' => 'sbr', 'Sabra04G0027300' => 'sbr', 'Sabra04G0119500' => 'sbr', 'Sabra08G0112500' => 'sbr', 'Sabra11G0036800' => 'sbr', 'Sabra11G0103800' => 'sbr', 'Sabra13G0096300' => 'sbr', 'Sabra16G0262300' => 'sbr', 'Sabra18G0091700' => 'sbr', 'Sabra19G0095400' => 'sbr', 'SalBow6G3080' => 'sbo', 'SalBow7G1157' => 'sbo', 'SalBow7G2123' => 'sbo', 'SalBow7G2285' => 'sbo', 'SalBow7G3537' => 'sbo', 'SalBow8G2947' => 'sbo', 'SalBow8G4463' => 'sbo', 'SalBow8G5466' => 'sbo', 'Sc01g0001750' => 'sci', 'Sc02g0006640' => 'sci', 'Sc02g0006670' => 'sci', 'Sc04g0008220' => 'sci', 'Sc05g0006190' => 'sci', 'Sc08g0002760' => 'sci', 'Sc17g0006170' => 'sci', 'Sc22g0002050' => 'sci', 'Sc23g0001190' => 'sci', 'Sc24g0000980' => 'sci', 'Sed0006245' => 'sed', 'Sed0007543' => 'sed', 'Sed0009411' => 'sed', 'Sed0010765' => 'sed', 'Sed0012944' => 'sed', 'Sed0014682' => 'sed', 'Sed0016174' => 'sed', 'Sed0016796' => 'sed', 'Sed0020317' => 'sed', 'Sed0021467' => 'sed', 'SEGI_01316' => 'sgi', 'SEGI_03374' => 'sgi', 'SEGI_16265' => 'sgi', 'SEGI_18569' => 'sgi', 'SEGI_20351' => 'sgi', 'SEGI_26395' => 'sgi', 'SEGI_29469' => 'sgi', 'SEGI_34771' => 'sgi', 'SEGI_36769' => 'sgi', 'SEGI_37139' => 'sgi', 'SGA_v2.0_scaffold100G29687' => 'sas', 'SGA_v2.0_scaffold118G32472' => 'sas', 'SGA_v2.0_scaffold14G07051' => 'sas', 'SGA_v2.0_scaffold183G39845' => 'sas', 'SGA_v2.0_scaffold1G00174' => 'sas', 'SGA_v2.0_scaffold22G09714' => 'sas', 'SGA_v2.0_scaffold333G48992' => 'sas', 'SGA_v2.0_scaffold46G17491' => 'sas', 'SGA_v2.0_scaffold49G18294' => 'sas', 'SGA_v2.0_scaffold63G21658' => 'sas', 'SHI01741' => 'shi', 'SHI05771' => 'shi', 'SHI18077' => 'shi', 'SHI20525' => 'shi', 'SHI20527' => 'shi', 'SHI20528' => 'shi', 'SMO172G0185' => 'smo', 'SMO198G0020' => 'smo', 'SMO351G0006' => 'smo', 'SMO356G0118' => 'smo', 'SMO358G0296' => 'smo', 'SMO367G0079' => 'smo', 'SMO367G1277' => 'smo', 'Solyc01g014220.3' => 'sly', 'Solyc01g111770.2' => 'sly', 'Solyc02g078180.3' => 'sly', 'Solyc03g006430.3' => 'sly', 'Solyc03g006456.1' => 'sly', 'Solyc03g079860.2' => 'sly', 'Solyc04g079770.3' => 'sly', 'Solyc05g007430.4' => 'sly', 'Solyc07g063150.3' => 'sly', 'Solyc08g016620.3' => 'sly', 'Solyc09g057590.3' => 'sly', 'Solyc09g057600.1' => 'sly', 'Solyc10g009050.3' => 'sly', 'Solyc11g017420.2' => 'sly', 'Sopen01g053810' => 'spe', 'Sopen02g023040' => 'spe', 'Sopen03g002440' => 'spe', 'Sopen04g033350' => 'spe', 'Sopen05g003310' => 'spe', 'Sopen07g004050' => 'spe', 'Sopen07g031340' => 'spe', 'Sopen08g006990' => 'spe', 'Sopen10g004830' => 'spe', 'Sopen11g009370' => 'spe', 'Sp1g24450' => 'spa', 'Sp1g29670' => 'spa', 'Sp1g39600' => 'spa', 'Sp2g11080' => 'spa', 'Sp2g13970' => 'spa', 'Sp4g16130' => 'spa', 'Sp6g13080' => 'spa', 'Sp7g37270' => 'spa', 'TAR371G0065' => 'tar', 'TAR376G0340' => 'tar', 'TAR376G0435' => 'tar', 'TAR381G0002' => 'tar', 'TAR381G1236' => 'tar', 'TAR624G0055' => 'tar', 'TAR624G0324' => 'tar', 'TAR624G0696' => 'tar', 'TAR624G0906' => 'tar', 'TAR625G0107' => 'tar', 'TAR626G0015' => 'tar', 'TAR626G1356' => 'tar', 'TAR627G0888' => 'tar', 'TAR628G0399' => 'tar', 'TAR628G1327' => 'tar', 'TAR629G2831' => 'tar', 'TAR629G2874' => 'tar', 'TAR633G1432' => 'tar', 'TAR633G2771' => 'tar', 'THA.LOC104803394' => 'tha', 'THA.LOC104805153' => 'tha', 'THA.LOC104806784' => 'tha', 'THA.LOC104810473' => 'tha', 'THA.LOC104813100' => 'tha', 'THA.LOC104814215' => 'tha', 'THA.LOC104815554' => 'tha', 'THA.LOC104820544' => 'tha', 'THA.LOC104824754' => 'tha', 'THA.LOC104827717' => 'tha', 'Thecc.02G031400' => 'tca', 'Thecc.02G055900' => 'tca', 'Thecc.02G350800' => 'tca', 'Thecc.06G150900' => 'tca', 'Thecc.06G186600' => 'tca', 'Thecc.07G089600' => 'tca', 'Thecc.08G020400' => 'tca', 'Thecc.08G182100' => 'tca', 'Thhalv10000873m.g' => 'esa', 'Thhalv10004185m.g' => 'esa', 'Thhalv10006981m.g' => 'esa', 'Thhalv10007204m.g' => 'esa', 'Thhalv10011374m.g' => 'esa', 'Thhalv10013482m.g' => 'esa', 'Thhalv10017801m.g' => 'esa', 'Thhalv10024983m.g' => 'esa', 'TPR.G12072' => 'tpr', 'TPR.G15769' => 'tpr', 'TPR.G16504' => 'tpr', 'TPR.G16506' => 'tpr', 'TPR.G24345' => 'tpr', 'TPR.G26666' => 'tpr', 'TPR.G27320' => 'tpr', 'TPR.G31819' => 'tpr', 'TPR.G38879' => 'tpr', 'TPR.G39015' => 'tpr', 'TPR.G8819' => 'tpr', 'TWI09G0924' => 'twi', 'TWI12G0811' => 'twi', 'TWI12G1294' => 'twi', 'TWI31G0150' => 'twi', 'TWI36G1262' => 'twi', 'TWI38G1287' => 'twi', 'TWI38G1633' => 'twi', 'TWI38G1982' => 'twi', 'TWI39G0116' => 'twi', 'TWI60G1011' => 'twi', 'TWI63G0171' => 'twi', 'TWI73G0839' => 'twi', 'TWI79G1511' => 'twi', 'unitig_0.g915' => 'ugi', 'unitig_0.g916' => 'ugi', 'unitig_21.g20219' => 'ugi', 'unitig_21.g20416' => 'ugi', 'unitig_578.g16132' => 'ugi', 'unitig_578.g16718' => 'ugi', 'unitig_62.g23481' => 'ugi', 'unitig_744.g24535' => 'ugi', 'unitig_749.g13525' => 'ugi', 'vmacro01248' => 'vma', 'vmacro02290' => 'vma', 'vmacro10946' => 'vma', 'vmacro11865' => 'vma', 'vmacro12493' => 'vma', 'vmacro17322' => 'vma', 'vmacro21599' => 'vma', 'vmacro23041' => 'vma', 'VMungo0251G0004' => 'vmu', 'VMungo0251G2639' => 'vmu', 'VMungo0251G2967' => 'vmu', 'VMungo0540G0864' => 'vmu', 'VMungo0540G1569' => 'vmu', 'VMungo0647G0317' => 'vmu', 'VMungo0720G1373' => 'vmu', 'VMungo0720G1508' => 'vmu', 'VMungo1080G0485' => 'vmu', 'VMungo1215G3177' => 'vmu', 'Zm00001eb112600' => 'zma', 'Zm00001eb120220' => 'zma', 'Zm00001eb153240' => 'zma', 'Zm00001eb168880' => 'zma', 'Zm00001eb213920' => 'zma', 'Zm00001eb228280' => 'zma', 'Zm00001eb254580' => 'zma', 'Zm00001eb272180' => 'zma', 'Zm00001eb293190' => 'zma', 'Zm00001eb322930' => 'zma', 'Zm00001eb353360' => 'zma', 'Zm00001eb353390' => 'zma', 'Zm00001eb353430' => 'zma', 'Zm00001eb353440' => 'zma', 'Zm00001eb353780' => 'zma' ), 'gf_id' => 'HOM05D000499', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000499' ), 'data_identifier' => 'HOM05D000499', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000499', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1066', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p29780' => 'bna', 'A02p33180' => 'bna', 'A03p16470' => 'bna', 'A03p66010' => 'bna', 'A04p25970' => 'bna', 'A06p01270' => 'bna', 'A06p46080' => 'bna', 'A07p11400' => 'bna', 'A08p01840' => 'bna', 'A08p08230' => 'bna', 'A08p25740' => 'bna', 'A09p32070' => 'bna', 'A09p37830' => 'bna', 'A09p42840' => 'bna', 'A09p42850' => 'bna', 'Aa31LG10G2060' => 'aar', 'Aa31LG2G7410' => 'aar', 'Aa31LG6G10200' => 'aar', 'Aa31LG6G16680' => 'aar', 'Aa31LG6G8470' => 'aar', 'Aa31LG9G12730' => 'aar', 'Aa31LG9G13680' => 'aar', 'Aa31LG9G14920' => 'aar', 'Aa31LG9G6650' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4977' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5467' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3254' => 'aag', 'Actinidia02578' => 'ach', 'Actinidia07693' => 'ach', 'Actinidia08413' => 'ach', 'Actinidia08414' => 'ach', 'Actinidia15289' => 'ach', 'Actinidia19871' => 'ach', 'Actinidia21475' => 'ach', 'Actinidia22576' => 'ach', 'Actinidia28327' => 'ach', 'Actinidia32491' => 'ach', 'Actinidia39463' => 'ach', 'Actinidia39571' => 'ach', 'Ah.01g013750' => 'amhyb', 'Ah.01g023210' => 'amhyb', 'Ah.04g164850' => 'amhyb', 'Ah.05g178060' => 'amhyb', 'Ah.07g204270' => 'amhyb', 'Ah.07g208480' => 'amhyb', 'Ah.09g237410' => 'amhyb', 'Ah.14g089460' => 'amhyb', 'AL1G41790' => 'aly', 'AL1G49050' => 'aly', 'AL1G53810' => 'aly', 'AL1G61400' => 'aly', 'AL4G18580' => 'aly', 'AL5G12510' => 'aly', 'AL5G12540' => 'aly', 'AL6G43230' => 'aly', 'AL7G10370' => 'aly', 'AL7G19250' => 'aly', 'AL8G12240' => 'aly', 'AL8G18540' => 'aly', 'Aqoxy1G02409' => 'aox', 'Aqoxy2G03993' => 'aox', 'Aqoxy3G03357' => 'aox', 'Aqoxy4G00785' => 'aox', 'Aqoxy5G02598' => 'aox', 'Aqoxy6G00132' => 'aox', 'Aqoxy7G01776' => 'aox', 'Aqoxy7G02316' => 'aox', 'Aqoxy7G03973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.12AFKW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B8730' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27IQR1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3F75VG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3RE0GA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41TCQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.527VTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FIR39' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5W8UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DA38EV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ63HS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H1I32C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HC27T5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4M8AP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7N3CZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9UVDZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LS1NQA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT1D4B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SKC4TM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCFV76' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF9Q1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQWD9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1ZM88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WE07RT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YCK7VH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJE6Q6' => 'arhy', 'AT1G28240' => 'ath', 'AT1G34550' => 'ath', 'AT1G53040' => 'ath', 'AT2G02910' => 'ath', 'AT4G09630' => 'ath', 'AT4G38500' => 'ath', 'AT5G42660' => 'ath', 'AT5G46220' => 'ath', 'ATR0152G026' => 'atr', 'ATR0564G343' => 'atr', 'ATR0706G151' => 'atr', 'ATR0733G207' => 'atr', 'ATR0751G234' => 'atr', 'ATR0807G048' => 'atr', 'ATR1091G084' => 'atr', 'Atru.chr10.1229' => 'acertr', 'Atru.chr10.1230' => 'acertr', 'Atru.chr10.1874' => 'acertr', 'Atru.chr11.1808' => 'acertr', 'Atru.chr13.1795' => 'acertr', 'Atru.chr13.570' => 'acertr', 'Atru.chr2.2608' => 'acertr', 'Atru.chr2.2609' => 'acertr', 'Atru.chr5.3428' => 'acertr', 'Atru.chr8.1171' => 'acertr', 'AUR62004651' => 'cqu', 'AUR62008675' => 'cqu', 'AUR62010014' => 'cqu', 'AUR62013004' => 'cqu', 'AUR62014825' => 'cqu', 'AUR62015015' => 'cqu', 'AUR62015151' => 'cqu', 'AUR62017020' => 'cqu', 'AUR62019422' => 'cqu', 'AUR62023570' => 'cqu', 'AUR62025571' => 'cqu', 'AUR62029098' => 'cqu', 'AUR62033863' => 'cqu', 'AUR62034296' => 'cqu', 'AUR62040075' => 'cqu', 'BcaB02g07334' => 'bca', 'BcaB02g10575' => 'bca', 'BcaB03g12119' => 'bca', 'BcaB03g12120' => 'bca', 'BcaB03g13945' => 'bca', 'BcaB04g17123' => 'bca', 'BcaB04g17867' => 'bca', 'BcaB04g19839' => 'bca', 'BcaB07g30317' => 'bca', 'BcaB07g32432' => 'bca', 'BcaB07g33362' => 'bca', 'BcaB08g36611' => 'bca', 'BcaC01g00028' => 'bca', 'BcaC01g01356' => 'bca', 'BcaC01g02034' => 'bca', 'BcaC01g06051' => 'bca', 'BcaC03g16839' => 'bca', 'BcaC03g17176' => 'bca', 'BcaC05g26829' => 'bca', 'BcaC06g31490' => 'bca', 'BcaC06g35344' => 'bca', 'BcaC06g36570' => 'bca', 'BcaC07g37537' => 'bca', 'BcaC08g43491' => 'bca', 'BcaC08g43773' => 'bca', 'BcaNung00234' => 'bca', 'BcaNung01982' => 'bca', 'BcaNung03707' => 'bca', 'BcaNung06454' => 'bca', 'BolC2t10762H' => 'bol', 'BolC2t11191H' => 'bol', 'BolC3t14322H' => 'bol', 'BolC3t19747H' => 'bol', 'BolC3t21425H' => 'bol', 'BolC4t27800H' => 'bol', 'BolC5t31423H' => 'bol', 'BolC6t35951H' => 'bol', 'BolC6t36282H' => 'bol', 'BolC7t40678H' => 'bol', 'BolC7t40679H' => 'bol', 'BolC7t42222H' => 'bol', 'BolC7t43492H' => 'bol', 'BolC7t46785H' => 'bol', 'BolC8t47853H' => 'bol', 'BolC9t56805H' => 'bol', 'BraA02t08000Z' => 'bra', 'BraA02t08341Z' => 'bra', 'BraA03t10936Z' => 'bra', 'BraA03t15657Z' => 'bra', 'BraA04t18100Z' => 'bra', 'BraA05t20523Z' => 'bra', 'BraA06t23353Z' => 'bra', 'BraA06t27473Z' => 'bra', 'BraA06t27769Z' => 'bra', 'BraA07t28928Z' => 'bra', 'BraA08t32236Z' => 'bra', 'BraA08t32841Z' => 'bra', 'BraA08t34524Z' => 'bra', 'BraA09t38742Z' => 'bra', 'BraA09t39295Z' => 'bra', 'C02p47180' => 'bna', 'C02p50990' => 'bna', 'C03p19360' => 'bna', 'C03p74950' => 'bna', 'C03p91000' => 'bna', 'C04p63260' => 'bna', 'C05p27050' => 'bna', 'C06p08750' => 'bna', 'C06p11490' => 'bna', 'C07p02820' => 'bna', 'C07p17180' => 'bna', 'C07p29440' => 'bna', 'C07p63730' => 'bna', 'C09p39260' => 'bna', 'CAN.G1164.34' => 'can', 'CAN.G1164.39' => 'can', 'CAN.G1530.3' => 'can', 'CAN.G162.61' => 'can', 'CAN.G176.6' => 'can', 'CAN.G289.49' => 'can', 'CAN.G370.21' => 'can', 'CAN.G370.22' => 'can', 'CAN.G371.117' => 'can', 'CAN.G58.37' => 'can', 'CAN.G588.98' => 'can', 'CANSAT21G2266' => 'cansat', 'CANSAT25G2799' => 'cansat', 'CANSAT35G0862' => 'cansat', 'CANSAT35G1704' => 'cansat', 'CANSAT35G1760' => 'cansat', 'CANSAT56G3971' => 'cansat', 'CANSAT56G4116' => 'cansat', 'CANSAT80G1259' => 'cansat', 'CARHR027730' => 'chi', 'CARHR033880' => 'chi', 'CARHR043270' => 'chi', 'CARHR145330' => 'chi', 'CARHR145340' => 'chi', 'CARHR175570' => 'chi', 'CARHR181570' => 'chi', 'CARHR258470' => 'chi', 'CARHR260490' => 'chi', 'CARHR294220' => 'chi', 'Carub.0001s2668' => 'cru', 'Carub.0001s3257' => 'cru', 'Carub.0001s4220' => 'cru', 'Carub.0005s0179' => 'cru', 'Carub.0006s2807' => 'cru', 'Carub.0007s0039' => 'cru', 'Carub.0008s0169' => 'cru', 'Carub.0008s0636' => 'cru', 'Ca_00338_v3' => 'car', 'Ca_00542_v3' => 'car', 'Ca_01844_v3' => 'car', 'Ca_10611_v3' => 'car', 'Ca_13326_v3' => 'car', 'Ca_17944_v3' => 'car', 'Ca_18546_v3' => 'car', 'Ca_24219_v3' => 'car', 'Ca_29972_v3' => 'car', 'CBR_g3681' => 'cbr', 'CBR_g40021' => 'cbr', 'Cc01_g08140' => 'ccan', 'Cc02_g13410' => 'ccan', 'Cc02_g37480' => 'ccan', 'Cc05_g12030' => 'ccan', 'Cc09_g03370' => 'ccan', 'Cc09_g10300' => 'ccan', 'Cc10_g03530' => 'ccan', 'Cc10_g11380' => 'ccan', 'CDE01G0176' => 'cde', 'CDE02G0675' => 'cde', 'CDE02G0942' => 'cde', 'CDE02G1153' => 'cde', 'CDE02G4177' => 'cde', 'CDE04G2117' => 'cde', 'CDE04G2736' => 'cde', 'CDE08G1161' => 'cde', 'CDE09G1238' => 'cde', 'Cfa000467' => 'cfa', 'Cfa000947' => 'cfa', 'Cfa004969' => 'cfa', 'Cfa005284' => 'cfa', 'Cfa008993' => 'cfa', 'Cfa018187' => 'cfa', 'Cfa018454' => 'cfa', 'Cfa020585' => 'cfa', 'Ciclev10000424m.g' => 'ccl', 'Ciclev10003605m.g' => 'ccl', 'Ciclev10007828m.g' => 'ccl', 'Ciclev10014620m.g' => 'ccl', 'Ciclev10015169m.g' => 'ccl', 'Ciclev10018291m.g' => 'ccl', 'Ciclev10028256m.g' => 'ccl', 'Ciclev10033822m.g' => 'ccl', 'CiPaw.05G060300' => 'cil', 'CiPaw.05G085000' => 'cil', 'CiPaw.06G083700' => 'cil', 'CiPaw.06G120300' => 'cil', 'CiPaw.09G060500' => 'cil', 'CiPaw.09G123800' => 'cil', 'CiPaw.11G169700' => 'cil', 'CiPaw.12G118300' => 'cil', 'CiPaw.15G071000' => 'cil', 'CiPaw.15G081900' => 'cil', 'ClCG01G024610' => 'cla', 'ClCG03G006070' => 'cla', 'ClCG05G019250' => 'cla', 'ClCG09G009500' => 'cla', 'ClCG11G008200' => 'cla', 'ClCG11G018080' => 'cla', 'COL.COLO4_17373' => 'col', 'COL.COLO4_22994' => 'col', 'COL.COLO4_26389' => 'col', 'COL.COLO4_27170' => 'col', 'COL.COLO4_31074' => 'col', 'COL.COLO4_31465' => 'col', 'COL.COLO4_36438' => 'col', 'COL.COLO4_36439' => 'col', 'Cpa.g.c38781' => 'cpa', 'Cpa.g.sc128.12' => 'cpa', 'Cpa.g.sc166.7' => 'cpa', 'Cpa.g.sc166.8' => 'cpa', 'Cpa.g.sc20.111' => 'cpa', 'Cpa.g.sc27.31' => 'cpa', 'Cpa.g.sc64.36' => 'cpa', 'Cpa.g.sc64.37' => 'cpa', 'Cpa.g.sc66.49' => 'cpa', 'Cpa.g.sc80.64' => 'cpa', 'CsaV3_1G012320' => 'csa', 'CsaV3_2G008480' => 'csa', 'CsaV3_2G033450' => 'csa', 'CsaV3_3G044830' => 'csa', 'CsaV3_4G033710' => 'csa', 'CsaV3_6G051730' => 'csa', 'CsaV3_7G025350' => 'csa', 'CSS0001067' => 'camsi', 'CSS0005996' => 'camsi', 'CSS0006590' => 'camsi', 'CSS0009673' => 'camsi', 'CSS0010201' => 'camsi', 'CSS0010549' => 'camsi', 'CSS0011364' => 'camsi', 'CSS0014473' => 'camsi', 'CSS0014961' => 'camsi', 'CSS0020191' => 'camsi', 'CSS0021165' => 'camsi', 'CSS0022306' => 'camsi', 'CSS0030591' => 'camsi', 'CSS0030696' => 'camsi', 'CSS0032653' => 'camsi', 'CSS0037487' => 'camsi', 'CSS0041102' => 'camsi', 'CSS0041261' => 'camsi', 'CSS0046246' => 'camsi', 'CSS0049256' => 'camsi', 'DCAR_004075' => 'dca', 'DCAR_011538' => 'dca', 'DCAR_019553' => 'dca', 'DCAR_020952' => 'dca', 'DCAR_021739' => 'dca', 'DCAR_027407' => 'dca', 'DCAR_027913' => 'dca', 'DCAR_028066' => 'dca', 'Dinv05899' => 'din', 'Dinv07563' => 'din', 'Dinv08010' => 'din', 'Dinv14125' => 'din', 'Dinv20172' => 'din', 'Dinv30743' => 'din', 'Dinv31229' => 'din', 'Dinv34162' => 'din', 'Dinv36028' => 'din', 'Dinv39368' => 'din', 'Dinv40565' => 'din', 'Dinv41706' => 'din', 'Duzib052G0089' => 'dzi', 'Duzib116G0641' => 'dzi', 'Duzib132G0069' => 'dzi', 'Duzib132G1219' => 'dzi', 'Duzib147G0278' => 'dzi', 'Duzib160G0480' => 'dzi', 'Duzib170G0661' => 'dzi', 'Duzib177G0591' => 'dzi', 'Duzib187G1353' => 'dzi', 'Duzib192G0858' => 'dzi', 'Duzib192G0883' => 'dzi', 'Duzib213G0506' => 'dzi', 'Duzib235G0289' => 'dzi', 'Duzib251G0422' => 'dzi', 'ECA232G3898' => 'eca', 'ECA233G5950' => 'eca', 'ECA234G1699' => 'eca', 'ECA234G2421' => 'eca', 'ECA236G0426' => 'eca', 'ECA236G4331' => 'eca', 'ECA248G2573' => 'eca', 'EL10Ac1g00077' => 'bvu', 'EL10Ac1g01746' => 'bvu', 'EL10Ac2g03464' => 'bvu', 'EL10Ac4g08176' => 'bvu', 'EL10Ac7g17521' => 'bvu', 'EL10Ac8g20386' => 'bvu', 'EL10Ac9g21343' => 'bvu', 'EL10Ac9g22688' => 'bvu', 'Eucgr.B03434' => 'egr', 'Eucgr.D00618' => 'egr', 'Eucgr.E02395' => 'egr', 'Eucgr.F01129' => 'egr', 'Eucgr.F02622' => 'egr', 'Eucgr.F04207' => 'egr', 'FAN01G0570' => 'fan', 'FAN03G3351' => 'fan', 'FAN06G3702' => 'fan', 'FAN07G2149' => 'fan', 'FAN10G3758' => 'fan', 'FAN11G1170' => 'fan', 'FAN11G2050' => 'fan', 'FAN11G2724' => 'fan', 'FAN12G1700' => 'fan', 'FAN12G2028' => 'fan', 'FAN15G1160' => 'fan', 'FAN15G3063' => 'fan', 'FAN16G2540' => 'fan', 'FAN16G3077' => 'fan', 'FAN16G3624' => 'fan', 'FAN17G0221' => 'fan', 'FAN20G2492' => 'fan', 'FAN20G2905' => 'fan', 'FAN21G0548' => 'fan', 'FAN21G1300' => 'fan', 'FAN22G0077' => 'fan', 'FAN22G1315' => 'fan', 'FAN24G1280' => 'fan', 'FAN24G1445' => 'fan', 'FAN24G3527' => 'fan', 'FAN25G0464' => 'fan', 'FAN25G2885' => 'fan', 'FAN25G3270' => 'fan', 'FAN27G1101' => 'fan', 'FAN27G2846' => 'fan', 'FAN27G3524' => 'fan', 'FvH4_2g11770' => 'fve', 'FvH4_2g15630' => 'fve', 'FvH4_3g05570' => 'fve', 'FvH4_3g09110' => 'fve', 'FvH4_3g19940' => 'fve', 'FvH4_4g04821' => 'fve', 'FvH4_4g31480' => 'fve', 'FvH4_7g01740' => 'fve', 'Glyma.05G130400' => 'gma', 'Glyma.05G156400' => 'gma', 'Glyma.07G197000' => 'gma', 'Glyma.08G085151' => 'gma', 'Glyma.08G114500' => 'gma', 'Glyma.08G300400' => 'gma', 'Glyma.10G215800' => 'gma', 'Glyma.12G224400' => 'gma', 'Glyma.13G179300' => 'gma', 'Glyma.13G218151' => 'gma', 'Glyma.13G238800' => 'gma', 'Glyma.13G276900' => 'gma', 'Glyma.14G078200' => 'gma', 'Glyma.15G074500' => 'gma', 'Glyma.15G094100' => 'gma', 'Glyma.17G247200' => 'gma', 'Glyma.18G120100' => 'gma', 'Glyma.20G176000' => 'gma', 'Gohir.A01G063600' => 'ghi', 'Gohir.A01G170301' => 'ghi', 'Gohir.A02G060500' => 'ghi', 'Gohir.A05G133850' => 'ghi', 'Gohir.A05G161400' => 'ghi', 'Gohir.A06G012900' => 'ghi', 'Gohir.A06G035901' => 'ghi', 'Gohir.A06G127100' => 'ghi', 'Gohir.A06G210500' => 'ghi', 'Gohir.A08G008650' => 'ghi', 'Gohir.A09G072700' => 'ghi', 'Gohir.A09G088301' => 'ghi', 'Gohir.A10G040600' => 'ghi', 'Gohir.A12G036300' => 'ghi', 'Gohir.A12G143350' => 'ghi', 'Gohir.A12G165500' => 'ghi', 'Gohir.A13G145700' => 'ghi', 'Gohir.D01G050000' => 'ghi', 'Gohir.D01G051366' => 'ghi', 'Gohir.D01G161350' => 'ghi', 'Gohir.D02G065900' => 'ghi', 'Gohir.D05G164200' => 'ghi', 'Gohir.D05G355500' => 'ghi', 'Gohir.D06G010400' => 'ghi', 'Gohir.D06G111250' => 'ghi', 'Gohir.D06G132000' => 'ghi', 'Gohir.D06G210500' => 'ghi', 'Gohir.D07G165675' => 'ghi', 'Gohir.D08G062240' => 'ghi', 'Gohir.D08G086101' => 'ghi', 'Gohir.D08G138060' => 'ghi', 'Gohir.D09G072300' => 'ghi', 'Gohir.D10G041400' => 'ghi', 'Gohir.D11G191020' => 'ghi', 'Gohir.D11G212066' => 'ghi', 'Gohir.D12G036300' => 'ghi', 'Gohir.D12G168600' => 'ghi', 'Gohir.D13G150600' => 'ghi', 'Gorai.001G057300' => 'gra', 'Gorai.002G069900' => 'gra', 'Gorai.002G200000' => 'gra', 'Gorai.003G067600' => 'gra', 'Gorai.005G074800' => 'gra', 'Gorai.006G087300' => 'gra', 'Gorai.008G037500' => 'gra', 'Gorai.008G181400' => 'gra', 'Gorai.009G169400' => 'gra', 'Gorai.009G387900' => 'gra', 'Gorai.010G013300' => 'gra', 'Gorai.010G153800' => 'gra', 'Gorai.010G255800' => 'gra', 'Gorai.011G043700' => 'gra', 'Gorai.011G198900' => 'gra', 'Gorai.013G168400' => 'gra', 'GSVIVG01005212001' => 'vvi', 'GSVIVG01006163001' => 'vvi', 'GSVIVG01009625001' => 'vvi', 'GSVIVG01014338001' => 'vvi', 'GSVIVG01020005001' => 'vvi', 'GSVIVG01021450001' => 'vvi', 'GSVIVG01023975001' => 'vvi', 'GSVIVG01034490001' => 'vvi', 'HanXRQChr04g0112071' => 'han', 'HanXRQChr05g0131151' => 'han', 'HanXRQChr09g0262371' => 'han', 'HanXRQChr09g0268401' => 'han', 'HanXRQChr10g0279241' => 'han', 'HanXRQChr10g0297961' => 'han', 'HanXRQChr11g0326231' => 'han', 'HanXRQChr11g0328471' => 'han', 'HanXRQChr16g0507941' => 'han', 'HanXRQChr17g0560211' => 'han', 'Haze_02108' => 'cav', 'Haze_02428' => 'cav', 'Haze_05593' => 'cav', 'Haze_06448' => 'cav', 'Haze_09427' => 'cav', 'Haze_12022' => 'cav', 'Haze_17612' => 'cav', 'Haze_17928' => 'cav', 'Hma1.2p1_0032F.1_g019250' => 'hma', 'Hma1.2p1_0163F.1_g072690' => 'hma', 'Hma1.2p1_0265F.1_g106710' => 'hma', 'Hma1.2p1_0286F.1_g113970' => 'hma', 'Hma1.2p1_0363F.1_g136640' => 'hma', 'Hma1.2p1_0584F.1_g183470' => 'hma', 'Hma1.2p1_0885F.1_g232570' => 'hma', 'HPP92_006022' => 'vpl', 'HPP92_007320' => 'vpl', 'HPP92_011521' => 'vpl', 'HPP92_019387' => 'vpl', 'HPP92_024038' => 'vpl', 'Hund05891' => 'sun', 'Hund06450' => 'sun', 'Hund12053' => 'sun', 'Hund16800' => 'sun', 'Hund21222' => 'sun', 'Hund22896' => 'sun', 'Hund23746' => 'sun', 'Hund27083' => 'sun', 'Lalb_Chr02g0141831' => 'lal', 'Lalb_Chr02g0141841' => 'lal', 'Lalb_Chr05g0220411' => 'lal', 'Lalb_Chr06g0162081' => 'lal', 'Lalb_Chr09g0327651' => 'lal', 'Lalb_Chr13g0295051' => 'lal', 'Lalb_Chr15g0086801' => 'lal', 'Lalb_Chr16g0383781' => 'lal', 'Lalb_Chr16g0383791' => 'lal', 'Lalb_Chr18g0055441' => 'lal', 'Lalb_Chr18g0059611' => 'lal', 'Lalb_Chr20g0109661' => 'lal', 'Lalb_Chr20g0109831' => 'lal', 'Lalb_Chr20g0121871' => 'lal', 'Lalb_Chr22g0355361' => 'lal', 'Lalb_Chr25g0286371' => 'lal', 'Lj1A1187G43' => 'lonja', 'Lj1A1205T50' => 'lonja', 'Lj1A800G33' => 'lonja', 'Lj1C1187T7' => 'lonja', 'Lj1C843T11' => 'lonja', 'Lj1g0010940' => 'lja', 'Lj2A288T69' => 'lonja', 'Lj3g0024276' => 'lja', 'Lj4A47T76' => 'lonja', 'Lj4g0005805' => 'lja', 'Lj4g0006097' => 'lja', 'Lj4g0008528' => 'lja', 'Lj4g0024907' => 'lja', 'Lj5g0012472' => 'lja', 'Lj5g0018648' => 'lja', 'Lj6C789G1' => 'lonja', 'Lj6g0004000' => 'lja', 'Lj7A292G67' => 'lonja', 'Lj7A292T64' => 'lonja', 'Lj9A400T58' => 'lonja', 'Lsat_1_v5_gn_1_126181' => 'lsa', 'Lsat_1_v5_gn_4_123041' => 'lsa', 'Lsat_1_v5_gn_4_133620' => 'lsa', 'Lsat_1_v5_gn_4_53221' => 'lsa', 'Lsat_1_v5_gn_4_71961' => 'lsa', 'Lsat_1_v5_gn_7_105241' => 'lsa', 'Lsat_1_v5_gn_7_21361' => 'lsa', 'Lsat_1_v5_gn_7_28860' => 'lsa', 'Lsat_1_v5_gn_7_31260' => 'lsa', 'Lsat_1_v5_gn_8_52801' => 'lsa', 'Manes.02G191400' => 'mes', 'Manes.03G110100' => 'mes', 'Manes.04G071100' => 'mes', 'Manes.05G100500' => 'mes', 'Manes.05G164700' => 'mes', 'Manes.15G087000' => 'mes', 'Manes.15G121500' => 'mes', 'Manes.16G028300' => 'mes', 'Manes.17G046100' => 'mes', 'Manes.17G069800' => 'mes', 'Manes.18G100500' => 'mes', 'Mapoly0002s0109' => 'mpo', 'Mapoly0024s0007' => 'mpo', 'Mapoly0089s0032' => 'mpo', 'MBI04_g42241_MAGBIO' => 'mbi', 'MBI05_g11988_MAGBIO' => 'mbi', 'MBI05_g35452_MAGBIO' => 'mbi', 'MBI07_g30179_MAGBIO' => 'mbi', 'MBI07_g35859_MAGBIO' => 'mbi', 'MBI07_g35860_MAGBIO' => 'mbi', 'MBI07_g37166_MAGBIO' => 'mbi', 'MBI08_g18172_MAGBIO' => 'mbi', 'MBI09_g08441_MAGBIO' => 'mbi', 'MBI13_g01676_MAGBIO' => 'mbi', 'MBI14_g42955_MAGBIO' => 'mbi', 'MBI16_g13161_MAGBIO' => 'mbi', 'MBI17_g27204_MAGBIO' => 'mbi', 'MBI19_g21595_MAGBIO' => 'mbi', 'MD00G1148400' => 'mdo', 'MD02G1301200' => 'mdo', 'MD03G1227800' => 'mdo', 'MD05G1041100' => 'mdo', 'MD05G1124800' => 'mdo', 'MD05G1284000' => 'mdo', 'MD05G1338800' => 'mdo', 'MD05G1338900' => 'mdo', 'MD07G1022800' => 'mdo', 'MD10G1047500' => 'mdo', 'MD10G1127500' => 'mdo', 'MD10G1262300' => 'mdo', 'MD10G1293800' => 'mdo', 'MD16G1074300' => 'mdo', 'Medtr1g021670' => 'mtr', 'Medtr1g096320' => 'mtr', 'Medtr2g013690' => 'mtr', 'Medtr2g019450' => 'mtr', 'Medtr2g085170' => 'mtr', 'Medtr4g088785' => 'mtr', 'Medtr8g055930' => 'mtr', 'Medtr8g085850' => 'mtr', 'MELO3C002605.2' => 'cme', 'MELO3C003891.2' => 'cme', 'MELO3C004012.2' => 'cme', 'MELO3C007134.2' => 'cme', 'MELO3C008118.2' => 'cme', 'MELO3C016700.2' => 'cme', 'MELO3C024127.2' => 'cme', 'MELO3C033361.2' => 'cme', 'MELO3C033362.2' => 'cme', 'Migut.C00430' => 'egut', 'Migut.C01246' => 'egut', 'Migut.E00101' => 'egut', 'Migut.H01486' => 'egut', 'Migut.H01939' => 'egut', 'Migut.K00360' => 'egut', 'Migut.M00910' => 'egut', 'Migut.M01139' => 'egut', 'Migut.N02677' => 'egut', 'MSTRG.13252' => 'ama', 'MSTRG.14701' => 'ama', 'MSTRG.1521' => 'ama', 'MSTRG.15884' => 'ama', 'MSTRG.16242' => 'ama', 'MSTRG.22285' => 'ama', 'MSTRG.22444' => 'ama', 'MSTRG.2349' => 'ama', 'MSTRG.26308' => 'ama', 'MSTRG.28296' => 'ama', 'MSTRG.9895' => 'ama', 'Nitab4.5_0000110g0060' => 'nta', 'Nitab4.5_0000420g0130' => 'nta', 'Nitab4.5_0000422g0030' => 'nta', 'Nitab4.5_0000560g0180' => 'nta', 'Nitab4.5_0000703g0100' => 'nta', 'Nitab4.5_0000786g0200' => 'nta', 'Nitab4.5_0001336g0020' => 'nta', 'Nitab4.5_0001796g0030' => 'nta', 'Nitab4.5_0003348g0060' => 'nta', 'Nitab4.5_0003698g0040' => 'nta', 'Nitab4.5_0003942g0090' => 'nta', 'Nitab4.5_0004775g0070' => 'nta', 'Nitab4.5_0004864g0030' => 'nta', 'Nitab4.5_0005615g0020' => 'nta', 'Nitab4.5_0009288g0030' => 'nta', 'Nitab4.5_0009341g0010' => 'nta', 'Nitab4.5_0009535g0010' => 'nta', 'Nn1g03995' => 'nnu', 'Nn1g04100' => 'nnu', 'Nn1g06530' => 'nnu', 'Nn3g16404' => 'nnu', 'Nn3g17212' => 'nnu', 'Nn3g20776' => 'nnu', 'Nn3g21923' => 'nnu', 'Nn5g27737' => 'nnu', 'Nn5g29461' => 'nnu', 'Nn7g38355' => 'nnu', 'Nn8g39873' => 'nnu', 'Oeu000548.2' => 'oeu', 'Oeu004672.1' => 'oeu', 'Oeu015605.2' => 'oeu', 'Oeu016092.1' => 'oeu', 'Oeu017879.3' => 'oeu', 'Oeu024910.1' => 'oeu', 'Oeu028965.1' => 'oeu', 'Oeu031269.1' => 'oeu', 'Oeu031270.1' => 'oeu', 'Oeu032535.1' => 'oeu', 'Oeu034151.1' => 'oeu', 'Oeu034152.1' => 'oeu', 'Oeu034588.2' => 'oeu', 'Oeu050846.1' => 'oeu', 'Oeu050849.2' => 'oeu', 'Oeu051063.2' => 'oeu', 'Oeu052368.1' => 'oeu', 'Oeu052370.1' => 'oeu', 'Os01g0210400' => 'osa', 'Os01g0304300' => 'osa', 'Os01g0749100' => 'osa', 'Os02g0745800' => 'osa', 'Os03g0769050' => 'osa', 'Os05g0531500' => 'osa', 'Os06g0724300' => 'osa', 'Os11g0198100' => 'osa', 'Peaxi162Scf00069g01425' => 'pax', 'Peaxi162Scf00280g00811' => 'pax', 'Peaxi162Scf00310g00615' => 'pax', 'Peaxi162Scf00362g00542' => 'pax', 'Peaxi162Scf00461g00310' => 'pax', 'Peaxi162Scf00530g00118' => 'pax', 'Peaxi162Scf00541g00057' => 'pax', 'Peaxi162Scf00661g00017' => 'pax', 'Peaxi162Scf00926g00027' => 'pax', 'Peaxi162Scf01064g00263' => 'pax', 'Peaxi162Scf01211g00135' => 'pax', 'PGR004G2336' => 'pgr', 'PGR042G0327' => 'pgr', 'PGR042G1957' => 'pgr', 'PGR042G2003' => 'pgr', 'PGR042G3929' => 'pgr', 'PGR083G1137' => 'pgr', 'PGR083G1364' => 'pgr', 'PGSC0003DMG400003381' => 'stu', 'PGSC0003DMG400003417' => 'stu', 'PGSC0003DMG400008981' => 'stu', 'PGSC0003DMG400012417' => 'stu', 'PGSC0003DMG400012823' => 'stu', 'PGSC0003DMG400016885' => 'stu', 'PGSC0003DMG400022812' => 'stu', 'PGSC0003DMG400029726' => 'stu', 'PGSC0003DMG401009243' => 'stu', 'PGSC0003DMG401031505' => 'stu', 'PGSC0003DMG402031505' => 'stu', 'Phvul.001G017600' => 'pvu', 'Phvul.002G193500' => 'pvu', 'Phvul.002G228900' => 'pvu', 'Phvul.002G236800' => 'pvu', 'Phvul.003G049500' => 'pvu', 'Phvul.005G072000' => 'pvu', 'Phvul.006G164800' => 'pvu', 'Phvul.006G185100' => 'pvu', 'Phvul.007G090000' => 'pvu', 'Potri.001G399800' => 'ptr', 'Potri.002G149900' => 'ptr', 'Potri.004G044100' => 'ptr', 'Potri.004G177600' => 'ptr', 'Potri.009G138000' => 'ptr', 'Potri.010G094000' => 'ptr', 'Potri.011G053000' => 'ptr', 'Potri.011G119300' => 'ptr', 'Potri.013G113700' => 'ptr', 'Potri.018G107800' => 'ptr', 'Potri.019G084100' => 'ptr', 'Pp3c14_23720' => 'ppa', 'Pp3c16_6340' => 'ppa', 'Pp3c23_13420' => 'ppa', 'Pp3c24_2740' => 'ppa', 'Pp3c25_860' => 'ppa', 'Pp3c8_21750' => 'ppa', 'Prupe.1G273000' => 'ppe', 'Prupe.1G273700' => 'ppe', 'Prupe.1G274100' => 'ppe', 'Prupe.2G023300' => 'ppe', 'Prupe.4G048000' => 'ppe', 'Prupe.4G080400' => 'ppe', 'Prupe.4G181200' => 'ppe', 'Prupe.8G056900' => 'ppe', 'Prupe.8G168700' => 'ppe', 'Psat1g189080' => 'psa', 'Psat1g204760' => 'psa', 'Psat4g175560' => 'psa', 'Psat4g177720' => 'psa', 'Psat5g244240' => 'psa', 'Psat6g010720' => 'psa', 'Psat6g187200' => 'psa', 'Psat7g072040' => 'psa', 'PSO017G3501' => 'pso', 'PSO063G2148' => 'pso', 'PSO063G5608' => 'pso', 'PSO210G6392' => 'pso', 'PSO541G2319' => 'pso', 'PSO541G2836' => 'pso', 'PSO541G4012' => 'pso', 'PSO541G6253' => 'pso', 'PSO675G0580' => 'pso', 'PSO675G0856' => 'pso', 'PSO675G5635' => 'pso', 'PSO675G9157' => 'pso', 'PSO832G1660' => 'pso', 'PSO832G1969' => 'pso', 'QL02p007186' => 'qlo', 'QL02p033904' => 'qlo', 'QL03p064391' => 'qlo', 'QL05p040593' => 'qlo', 'QL05p058242' => 'qlo', 'QL08p021825' => 'qlo', 'QL11p004981' => 'qlo', 'RcHm_v2.0_Chr1g0318301' => 'rch', 'RcHm_v2.0_Chr4g0418501' => 'rch', 'RcHm_v2.0_Chr4g0439971' => 'rch', 'RcHm_v2.0_Chr5g0008541' => 'rch', 'RcHm_v2.0_Chr5g0014101' => 'rch', 'RcHm_v2.0_Chr5g0014131' => 'rch', 'RcHm_v2.0_Chr5g0033621' => 'rch', 'RcHm_v2.0_Chr6g0272041' => 'rch', 'RcHm_v2.0_Chr6g0278831' => 'rch', 'Rhsim02G0130400' => 'rsi', 'Rhsim02G0171100' => 'rsi', 'Rhsim05G0053000' => 'rsi', 'Rhsim05G0053100' => 'rsi', 'Rhsim06G0096500' => 'rsi', 'Rhsim06G0096600' => 'rsi', 'Rhsim06G0199100' => 'rsi', 'Rhsim12G0062300' => 'rsi', 'Rhsim12G0062800' => 'rsi', 'Sabra02G0118600' => 'sbr', 'Sabra04G0027300' => 'sbr', 'Sabra04G0119500' => 'sbr', 'Sabra08G0112500' => 'sbr', 'Sabra11G0036800' => 'sbr', 'Sabra11G0103800' => 'sbr', 'Sabra13G0096300' => 'sbr', 'Sabra16G0262300' => 'sbr', 'Sabra18G0091700' => 'sbr', 'Sabra19G0095400' => 'sbr', 'SalBow6G3080' => 'sbo', 'SalBow7G1157' => 'sbo', 'SalBow7G2123' => 'sbo', 'SalBow7G2285' => 'sbo', 'SalBow7G3537' => 'sbo', 'SalBow8G2947' => 'sbo', 'SalBow8G4463' => 'sbo', 'SalBow8G5466' => 'sbo', 'Sc01g0001750' => 'sci', 'Sc02g0006640' => 'sci', 'Sc02g0006670' => 'sci', 'Sc04g0008220' => 'sci', 'Sc05g0006190' => 'sci', 'Sc08g0002760' => 'sci', 'Sc17g0006170' => 'sci', 'Sc22g0002050' => 'sci', 'Sc23g0001190' => 'sci', 'Sc24g0000980' => 'sci', 'Sed0006245' => 'sed', 'Sed0007543' => 'sed', 'Sed0009411' => 'sed', 'Sed0010765' => 'sed', 'Sed0012944' => 'sed', 'Sed0014682' => 'sed', 'Sed0016174' => 'sed', 'Sed0016796' => 'sed', 'Sed0020317' => 'sed', 'Sed0021467' => 'sed', 'SEGI_01316' => 'sgi', 'SEGI_03374' => 'sgi', 'SEGI_16265' => 'sgi', 'SEGI_18569' => 'sgi', 'SEGI_20351' => 'sgi', 'SEGI_26395' => 'sgi', 'SEGI_29469' => 'sgi', 'SEGI_34771' => 'sgi', 'SEGI_36769' => 'sgi', 'SEGI_37139' => 'sgi', 'SGA_v2.0_scaffold100G29687' => 'sas', 'SGA_v2.0_scaffold118G32472' => 'sas', 'SGA_v2.0_scaffold14G07051' => 'sas', 'SGA_v2.0_scaffold183G39845' => 'sas', 'SGA_v2.0_scaffold1G00174' => 'sas', 'SGA_v2.0_scaffold22G09714' => 'sas', 'SGA_v2.0_scaffold333G48992' => 'sas', 'SGA_v2.0_scaffold46G17491' => 'sas', 'SGA_v2.0_scaffold49G18294' => 'sas', 'SGA_v2.0_scaffold63G21658' => 'sas', 'SHI01741' => 'shi', 'SHI05771' => 'shi', 'SHI18077' => 'shi', 'SHI20525' => 'shi', 'SHI20527' => 'shi', 'SHI20528' => 'shi', 'SMO172G0185' => 'smo', 'SMO198G0020' => 'smo', 'SMO351G0006' => 'smo', 'SMO356G0118' => 'smo', 'SMO358G0296' => 'smo', 'SMO367G0079' => 'smo', 'SMO367G1277' => 'smo', 'Solyc01g014220.3' => 'sly', 'Solyc01g111770.2' => 'sly', 'Solyc02g078180.3' => 'sly', 'Solyc03g006430.3' => 'sly', 'Solyc03g006456.1' => 'sly', 'Solyc03g079860.2' => 'sly', 'Solyc04g079770.3' => 'sly', 'Solyc05g007430.4' => 'sly', 'Solyc07g063150.3' => 'sly', 'Solyc08g016620.3' => 'sly', 'Solyc09g057590.3' => 'sly', 'Solyc09g057600.1' => 'sly', 'Solyc10g009050.3' => 'sly', 'Solyc11g017420.2' => 'sly', 'Sopen01g053810' => 'spe', 'Sopen02g023040' => 'spe', 'Sopen03g002440' => 'spe', 'Sopen04g033350' => 'spe', 'Sopen05g003310' => 'spe', 'Sopen07g004050' => 'spe', 'Sopen07g031340' => 'spe', 'Sopen08g006990' => 'spe', 'Sopen10g004830' => 'spe', 'Sopen11g009370' => 'spe', 'Sp1g24450' => 'spa', 'Sp1g29670' => 'spa', 'Sp1g39600' => 'spa', 'Sp2g11080' => 'spa', 'Sp2g13970' => 'spa', 'Sp4g16130' => 'spa', 'Sp6g13080' => 'spa', 'Sp7g37270' => 'spa', 'TAR371G0065' => 'tar', 'TAR376G0340' => 'tar', 'TAR376G0435' => 'tar', 'TAR381G0002' => 'tar', 'TAR381G1236' => 'tar', 'TAR624G0055' => 'tar', 'TAR624G0324' => 'tar', 'TAR624G0696' => 'tar', 'TAR624G0906' => 'tar', 'TAR625G0107' => 'tar', 'TAR626G0015' => 'tar', 'TAR626G1356' => 'tar', 'TAR627G0888' => 'tar', 'TAR628G0399' => 'tar', 'TAR628G1327' => 'tar', 'TAR629G2831' => 'tar', 'TAR629G2874' => 'tar', 'TAR633G1432' => 'tar', 'TAR633G2771' => 'tar', 'THA.LOC104803394' => 'tha', 'THA.LOC104805153' => 'tha', 'THA.LOC104806784' => 'tha', 'THA.LOC104810473' => 'tha', 'THA.LOC104813100' => 'tha', 'THA.LOC104814215' => 'tha', 'THA.LOC104815554' => 'tha', 'THA.LOC104820544' => 'tha', 'THA.LOC104824754' => 'tha', 'THA.LOC104827717' => 'tha', 'Thecc.02G031400' => 'tca', 'Thecc.02G055900' => 'tca', 'Thecc.02G350800' => 'tca', 'Thecc.06G150900' => 'tca', 'Thecc.06G186600' => 'tca', 'Thecc.07G089600' => 'tca', 'Thecc.08G020400' => 'tca', 'Thecc.08G182100' => 'tca', 'Thhalv10000873m.g' => 'esa', 'Thhalv10004185m.g' => 'esa', 'Thhalv10006981m.g' => 'esa', 'Thhalv10007204m.g' => 'esa', 'Thhalv10011374m.g' => 'esa', 'Thhalv10013482m.g' => 'esa', 'Thhalv10017801m.g' => 'esa', 'Thhalv10024983m.g' => 'esa', 'TPR.G12072' => 'tpr', 'TPR.G15769' => 'tpr', 'TPR.G16504' => 'tpr', 'TPR.G16506' => 'tpr', 'TPR.G24345' => 'tpr', 'TPR.G26666' => 'tpr', 'TPR.G27320' => 'tpr', 'TPR.G31819' => 'tpr', 'TPR.G38879' => 'tpr', 'TPR.G39015' => 'tpr', 'TPR.G8819' => 'tpr', 'TWI09G0924' => 'twi', 'TWI12G0811' => 'twi', 'TWI12G1294' => 'twi', 'TWI31G0150' => 'twi', 'TWI36G1262' => 'twi', 'TWI38G1287' => 'twi', 'TWI38G1633' => 'twi', 'TWI38G1982' => 'twi', 'TWI39G0116' => 'twi', 'TWI60G1011' => 'twi', 'TWI63G0171' => 'twi', 'TWI73G0839' => 'twi', 'TWI79G1511' => 'twi', 'unitig_0.g915' => 'ugi', 'unitig_0.g916' => 'ugi', 'unitig_21.g20219' => 'ugi', 'unitig_21.g20416' => 'ugi', 'unitig_578.g16132' => 'ugi', 'unitig_578.g16718' => 'ugi', 'unitig_62.g23481' => 'ugi', 'unitig_744.g24535' => 'ugi', 'unitig_749.g13525' => 'ugi', 'vmacro01248' => 'vma', 'vmacro02290' => 'vma', 'vmacro10946' => 'vma', 'vmacro11865' => 'vma', 'vmacro12493' => 'vma', 'vmacro17322' => 'vma', 'vmacro21599' => 'vma', 'vmacro23041' => 'vma', 'VMungo0251G0004' => 'vmu', 'VMungo0251G2639' => 'vmu', 'VMungo0251G2967' => 'vmu', 'VMungo0540G0864' => 'vmu', 'VMungo0540G1569' => 'vmu', 'VMungo0647G0317' => 'vmu', 'VMungo0720G1373' => 'vmu', 'VMungo0720G1508' => 'vmu', 'VMungo1080G0485' => 'vmu', 'VMungo1215G3177' => 'vmu', 'Zm00001eb112600' => 'zma', 'Zm00001eb120220' => 'zma', 'Zm00001eb153240' => 'zma', 'Zm00001eb168880' => 'zma', 'Zm00001eb213920' => 'zma', 'Zm00001eb228280' => 'zma', 'Zm00001eb254580' => 'zma', 'Zm00001eb272180' => 'zma', 'Zm00001eb293190' => 'zma', 'Zm00001eb322930' => 'zma', 'Zm00001eb353360' => 'zma', 'Zm00001eb353390' => 'zma', 'Zm00001eb353430' => 'zma', 'Zm00001eb353440' => 'zma', 'Zm00001eb353780' => 'zma' ) $gf_id = 'HOM05D000499' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000499' ) $data_identifier = 'HOM05D000499' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 29, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 12, 'amhyb' => (int) 8, 'aly' => (int) 12, 'aox' => (int) 9, 'arhy' => (int) 26, 'ath' => (int) 8, 'atr' => (int) 7, 'acertr' => (int) 10, 'cqu' => (int) 15, 'bca' => (int) 29, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 11, 'cansat' => (int) 8, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 9, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 8, 'cpa' => (int) 10, 'csa' => (int) 7, 'camsi' => (int) 20, 'dca' => (int) 8, 'din' => (int) 12, 'dzi' => (int) 14, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 6, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 38, 'gra' => (int) 16, 'vvi' => (int) 8, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 5, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 11, 'lja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 11, 'mpo' => (int) 3, 'mbi' => (int) 14, 'mdo' => (int) 14, 'mtr' => (int) 8, 'cme' => (int) 9, 'egut' => (int) 9, 'ama' => (int) 11, 'nta' => (int) 17, 'nnu' => (int) 11, 'oeu' => (int) 18, 'osa' => (int) 8, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 6, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 9, 'rsi' => (int) 9, 'sbr' => (int) 10, 'sbo' => (int) 8, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 10, 'sas' => (int) 10, 'shi' => (int) 6, 'smo' => (int) 7, 'sly' => (int) 14, 'spe' => (int) 10, 'spa' => (int) 8, 'tar' => (int) 19, 'tha' => (int) 10, 'tca' => (int) 8, 'esa' => (int) 8, 'tpr' => (int) 11, 'twi' => (int) 13, 'ugi' => (int) 9, 'vma' => (int) 8, 'vmu' => (int) 10, 'zma' => (int) 15 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb353780' $species_info = array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ) $local_species = 'gra' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000499', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1066', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p29780' => 'bna', 'A02p33180' => 'bna', 'A03p16470' => 'bna', 'A03p66010' => 'bna', 'A04p25970' => 'bna', 'A06p01270' => 'bna', 'A06p46080' => 'bna', 'A07p11400' => 'bna', 'A08p01840' => 'bna', 'A08p08230' => 'bna', 'A08p25740' => 'bna', 'A09p32070' => 'bna', 'A09p37830' => 'bna', 'A09p42840' => 'bna', 'A09p42850' => 'bna', 'Aa31LG10G2060' => 'aar', 'Aa31LG2G7410' => 'aar', 'Aa31LG6G10200' => 'aar', 'Aa31LG6G16680' => 'aar', 'Aa31LG6G8470' => 'aar', 'Aa31LG9G12730' => 'aar', 'Aa31LG9G13680' => 'aar', 'Aa31LG9G14920' => 'aar', 'Aa31LG9G6650' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4977' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5467' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3254' => 'aag', 'Actinidia02578' => 'ach', 'Actinidia07693' => 'ach', 'Actinidia08413' => 'ach', 'Actinidia08414' => 'ach', 'Actinidia15289' => 'ach', 'Actinidia19871' => 'ach', 'Actinidia21475' => 'ach', 'Actinidia22576' => 'ach', 'Actinidia28327' => 'ach', 'Actinidia32491' => 'ach', 'Actinidia39463' => 'ach', 'Actinidia39571' => 'ach', 'Ah.01g013750' => 'amhyb', 'Ah.01g023210' => 'amhyb', 'Ah.04g164850' => 'amhyb', 'Ah.05g178060' => 'amhyb', 'Ah.07g204270' => 'amhyb', 'Ah.07g208480' => 'amhyb', 'Ah.09g237410' => 'amhyb', 'Ah.14g089460' => 'amhyb', 'AL1G41790' => 'aly', 'AL1G49050' => 'aly', 'AL1G53810' => 'aly', 'AL1G61400' => 'aly', 'AL4G18580' => 'aly', 'AL5G12510' => 'aly', 'AL5G12540' => 'aly', 'AL6G43230' => 'aly', 'AL7G10370' => 'aly', 'AL7G19250' => 'aly', 'AL8G12240' => 'aly', 'AL8G18540' => 'aly', 'Aqoxy1G02409' => 'aox', 'Aqoxy2G03993' => 'aox', 'Aqoxy3G03357' => 'aox', 'Aqoxy4G00785' => 'aox', 'Aqoxy5G02598' => 'aox', 'Aqoxy6G00132' => 'aox', 'Aqoxy7G01776' => 'aox', 'Aqoxy7G02316' => 'aox', 'Aqoxy7G03973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.12AFKW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B8730' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27IQR1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3F75VG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3RE0GA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41TCQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.527VTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FIR39' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5W8UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DA38EV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ63HS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H1I32C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HC27T5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4M8AP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7N3CZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9UVDZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LS1NQA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT1D4B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SKC4TM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCFV76' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF9Q1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQWD9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1ZM88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WE07RT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YCK7VH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJE6Q6' => 'arhy', 'AT1G28240' => 'ath', 'AT1G34550' => 'ath', 'AT1G53040' => 'ath', 'AT2G02910' => 'ath', 'AT4G09630' => 'ath', 'AT4G38500' => 'ath', 'AT5G42660' => 'ath', 'AT5G46220' => 'ath', 'ATR0152G026' => 'atr', 'ATR0564G343' => 'atr', 'ATR0706G151' => 'atr', 'ATR0733G207' => 'atr', 'ATR0751G234' => 'atr', 'ATR0807G048' => 'atr', 'ATR1091G084' => 'atr', 'Atru.chr10.1229' => 'acertr', 'Atru.chr10.1230' => 'acertr', 'Atru.chr10.1874' => 'acertr', 'Atru.chr11.1808' => 'acertr', 'Atru.chr13.1795' => 'acertr', 'Atru.chr13.570' => 'acertr', 'Atru.chr2.2608' => 'acertr', 'Atru.chr2.2609' => 'acertr', 'Atru.chr5.3428' => 'acertr', 'Atru.chr8.1171' => 'acertr', 'AUR62004651' => 'cqu', 'AUR62008675' => 'cqu', 'AUR62010014' => 'cqu', 'AUR62013004' => 'cqu', 'AUR62014825' => 'cqu', 'AUR62015015' => 'cqu', 'AUR62015151' => 'cqu', 'AUR62017020' => 'cqu', 'AUR62019422' => 'cqu', 'AUR62023570' => 'cqu', 'AUR62025571' => 'cqu', 'AUR62029098' => 'cqu', 'AUR62033863' => 'cqu', 'AUR62034296' => 'cqu', 'AUR62040075' => 'cqu', 'BcaB02g07334' => 'bca', 'BcaB02g10575' => 'bca', 'BcaB03g12119' => 'bca', 'BcaB03g12120' => 'bca', 'BcaB03g13945' => 'bca', 'BcaB04g17123' => 'bca', 'BcaB04g17867' => 'bca', 'BcaB04g19839' => 'bca', 'BcaB07g30317' => 'bca', 'BcaB07g32432' => 'bca', 'BcaB07g33362' => 'bca', 'BcaB08g36611' => 'bca', 'BcaC01g00028' => 'bca', 'BcaC01g01356' => 'bca', 'BcaC01g02034' => 'bca', 'BcaC01g06051' => 'bca', 'BcaC03g16839' => 'bca', 'BcaC03g17176' => 'bca', 'BcaC05g26829' => 'bca', 'BcaC06g31490' => 'bca', 'BcaC06g35344' => 'bca', 'BcaC06g36570' => 'bca', 'BcaC07g37537' => 'bca', 'BcaC08g43491' => 'bca', 'BcaC08g43773' => 'bca', 'BcaNung00234' => 'bca', 'BcaNung01982' => 'bca', 'BcaNung03707' => 'bca', 'BcaNung06454' => 'bca', 'BolC2t10762H' => 'bol', 'BolC2t11191H' => 'bol', 'BolC3t14322H' => 'bol', 'BolC3t19747H' => 'bol', 'BolC3t21425H' => 'bol', 'BolC4t27800H' => 'bol', 'BolC5t31423H' => 'bol', 'BolC6t35951H' => 'bol', 'BolC6t36282H' => 'bol', 'BolC7t40678H' => 'bol', 'BolC7t40679H' => 'bol', 'BolC7t42222H' => 'bol', 'BolC7t43492H' => 'bol', 'BolC7t46785H' => 'bol', 'BolC8t47853H' => 'bol', 'BolC9t56805H' => 'bol', 'BraA02t08000Z' => 'bra', 'BraA02t08341Z' => 'bra', 'BraA03t10936Z' => 'bra', 'BraA03t15657Z' => 'bra', 'BraA04t18100Z' => 'bra', 'BraA05t20523Z' => 'bra', 'BraA06t23353Z' => 'bra', 'BraA06t27473Z' => 'bra', 'BraA06t27769Z' => 'bra', 'BraA07t28928Z' => 'bra', 'BraA08t32236Z' => 'bra', 'BraA08t32841Z' => 'bra', 'BraA08t34524Z' => 'bra', 'BraA09t38742Z' => 'bra', 'BraA09t39295Z' => 'bra', 'C02p47180' => 'bna', 'C02p50990' => 'bna', 'C03p19360' => 'bna', 'C03p74950' => 'bna', 'C03p91000' => 'bna', 'C04p63260' => 'bna', 'C05p27050' => 'bna', 'C06p08750' => 'bna', 'C06p11490' => 'bna', 'C07p02820' => 'bna', 'C07p17180' => 'bna', 'C07p29440' => 'bna', 'C07p63730' => 'bna', 'C09p39260' => 'bna', 'CAN.G1164.34' => 'can', 'CAN.G1164.39' => 'can', 'CAN.G1530.3' => 'can', 'CAN.G162.61' => 'can', 'CAN.G176.6' => 'can', 'CAN.G289.49' => 'can', 'CAN.G370.21' => 'can', 'CAN.G370.22' => 'can', 'CAN.G371.117' => 'can', 'CAN.G58.37' => 'can', 'CAN.G588.98' => 'can', 'CANSAT21G2266' => 'cansat', 'CANSAT25G2799' => 'cansat', 'CANSAT35G0862' => 'cansat', 'CANSAT35G1704' => 'cansat', 'CANSAT35G1760' => 'cansat', 'CANSAT56G3971' => 'cansat', 'CANSAT56G4116' => 'cansat', 'CANSAT80G1259' => 'cansat', 'CARHR027730' => 'chi', 'CARHR033880' => 'chi', 'CARHR043270' => 'chi', 'CARHR145330' => 'chi', 'CARHR145340' => 'chi', 'CARHR175570' => 'chi', 'CARHR181570' => 'chi', 'CARHR258470' => 'chi', 'CARHR260490' => 'chi', 'CARHR294220' => 'chi', 'Carub.0001s2668' => 'cru', 'Carub.0001s3257' => 'cru', 'Carub.0001s4220' => 'cru', 'Carub.0005s0179' => 'cru', 'Carub.0006s2807' => 'cru', 'Carub.0007s0039' => 'cru', 'Carub.0008s0169' => 'cru', 'Carub.0008s0636' => 'cru', 'Ca_00338_v3' => 'car', 'Ca_00542_v3' => 'car', 'Ca_01844_v3' => 'car', 'Ca_10611_v3' => 'car', 'Ca_13326_v3' => 'car', 'Ca_17944_v3' => 'car', 'Ca_18546_v3' => 'car', 'Ca_24219_v3' => 'car', 'Ca_29972_v3' => 'car', 'CBR_g3681' => 'cbr', 'CBR_g40021' => 'cbr', 'Cc01_g08140' => 'ccan', 'Cc02_g13410' => 'ccan', 'Cc02_g37480' => 'ccan', 'Cc05_g12030' => 'ccan', 'Cc09_g03370' => 'ccan', 'Cc09_g10300' => 'ccan', 'Cc10_g03530' => 'ccan', 'Cc10_g11380' => 'ccan', 'CDE01G0176' => 'cde', 'CDE02G0675' => 'cde', 'CDE02G0942' => 'cde', 'CDE02G1153' => 'cde', 'CDE02G4177' => 'cde', 'CDE04G2117' => 'cde', 'CDE04G2736' => 'cde', 'CDE08G1161' => 'cde', 'CDE09G1238' => 'cde', 'Cfa000467' => 'cfa', 'Cfa000947' => 'cfa', 'Cfa004969' => 'cfa', 'Cfa005284' => 'cfa', 'Cfa008993' => 'cfa', 'Cfa018187' => 'cfa', 'Cfa018454' => 'cfa', 'Cfa020585' => 'cfa', 'Ciclev10000424m.g' => 'ccl', 'Ciclev10003605m.g' => 'ccl', 'Ciclev10007828m.g' => 'ccl', 'Ciclev10014620m.g' => 'ccl', 'Ciclev10015169m.g' => 'ccl', 'Ciclev10018291m.g' => 'ccl', 'Ciclev10028256m.g' => 'ccl', 'Ciclev10033822m.g' => 'ccl', 'CiPaw.05G060300' => 'cil', 'CiPaw.05G085000' => 'cil', 'CiPaw.06G083700' => 'cil', 'CiPaw.06G120300' => 'cil', 'CiPaw.09G060500' => 'cil', 'CiPaw.09G123800' => 'cil', 'CiPaw.11G169700' => 'cil', 'CiPaw.12G118300' => 'cil', 'CiPaw.15G071000' => 'cil', 'CiPaw.15G081900' => 'cil', 'ClCG01G024610' => 'cla', 'ClCG03G006070' => 'cla', 'ClCG05G019250' => 'cla', 'ClCG09G009500' => 'cla', 'ClCG11G008200' => 'cla', 'ClCG11G018080' => 'cla', 'COL.COLO4_17373' => 'col', 'COL.COLO4_22994' => 'col', 'COL.COLO4_26389' => 'col', 'COL.COLO4_27170' => 'col', 'COL.COLO4_31074' => 'col', 'COL.COLO4_31465' => 'col', 'COL.COLO4_36438' => 'col', 'COL.COLO4_36439' => 'col', 'Cpa.g.c38781' => 'cpa', 'Cpa.g.sc128.12' => 'cpa', 'Cpa.g.sc166.7' => 'cpa', 'Cpa.g.sc166.8' => 'cpa', 'Cpa.g.sc20.111' => 'cpa', 'Cpa.g.sc27.31' => 'cpa', 'Cpa.g.sc64.36' => 'cpa', 'Cpa.g.sc64.37' => 'cpa', 'Cpa.g.sc66.49' => 'cpa', 'Cpa.g.sc80.64' => 'cpa', 'CsaV3_1G012320' => 'csa', 'CsaV3_2G008480' => 'csa', 'CsaV3_2G033450' => 'csa', 'CsaV3_3G044830' => 'csa', 'CsaV3_4G033710' => 'csa', 'CsaV3_6G051730' => 'csa', 'CsaV3_7G025350' => 'csa', 'CSS0001067' => 'camsi', 'CSS0005996' => 'camsi', 'CSS0006590' => 'camsi', 'CSS0009673' => 'camsi', 'CSS0010201' => 'camsi', 'CSS0010549' => 'camsi', 'CSS0011364' => 'camsi', 'CSS0014473' => 'camsi', 'CSS0014961' => 'camsi', 'CSS0020191' => 'camsi', 'CSS0021165' => 'camsi', 'CSS0022306' => 'camsi', 'CSS0030591' => 'camsi', 'CSS0030696' => 'camsi', 'CSS0032653' => 'camsi', 'CSS0037487' => 'camsi', 'CSS0041102' => 'camsi', 'CSS0041261' => 'camsi', 'CSS0046246' => 'camsi', 'CSS0049256' => 'camsi', 'DCAR_004075' => 'dca', 'DCAR_011538' => 'dca', 'DCAR_019553' => 'dca', 'DCAR_020952' => 'dca', 'DCAR_021739' => 'dca', 'DCAR_027407' => 'dca', 'DCAR_027913' => 'dca', 'DCAR_028066' => 'dca', 'Dinv05899' => 'din', 'Dinv07563' => 'din', 'Dinv08010' => 'din', 'Dinv14125' => 'din', 'Dinv20172' => 'din', 'Dinv30743' => 'din', 'Dinv31229' => 'din', 'Dinv34162' => 'din', 'Dinv36028' => 'din', 'Dinv39368' => 'din', 'Dinv40565' => 'din', 'Dinv41706' => 'din', 'Duzib052G0089' => 'dzi', 'Duzib116G0641' => 'dzi', 'Duzib132G0069' => 'dzi', 'Duzib132G1219' => 'dzi', 'Duzib147G0278' => 'dzi', 'Duzib160G0480' => 'dzi', 'Duzib170G0661' => 'dzi', 'Duzib177G0591' => 'dzi', 'Duzib187G1353' => 'dzi', 'Duzib192G0858' => 'dzi', 'Duzib192G0883' => 'dzi', 'Duzib213G0506' => 'dzi', 'Duzib235G0289' => 'dzi', 'Duzib251G0422' => 'dzi', 'ECA232G3898' => 'eca', 'ECA233G5950' => 'eca', 'ECA234G1699' => 'eca', 'ECA234G2421' => 'eca', 'ECA236G0426' => 'eca', 'ECA236G4331' => 'eca', 'ECA248G2573' => 'eca', 'EL10Ac1g00077' => 'bvu', 'EL10Ac1g01746' => 'bvu', 'EL10Ac2g03464' => 'bvu', 'EL10Ac4g08176' => 'bvu', 'EL10Ac7g17521' => 'bvu', 'EL10Ac8g20386' => 'bvu', 'EL10Ac9g21343' => 'bvu', 'EL10Ac9g22688' => 'bvu', 'Eucgr.B03434' => 'egr', 'Eucgr.D00618' => 'egr', 'Eucgr.E02395' => 'egr', 'Eucgr.F01129' => 'egr', 'Eucgr.F02622' => 'egr', 'Eucgr.F04207' => 'egr', 'FAN01G0570' => 'fan', 'FAN03G3351' => 'fan', 'FAN06G3702' => 'fan', 'FAN07G2149' => 'fan', 'FAN10G3758' => 'fan', 'FAN11G1170' => 'fan', 'FAN11G2050' => 'fan', 'FAN11G2724' => 'fan', 'FAN12G1700' => 'fan', 'FAN12G2028' => 'fan', 'FAN15G1160' => 'fan', 'FAN15G3063' => 'fan', 'FAN16G2540' => 'fan', 'FAN16G3077' => 'fan', 'FAN16G3624' => 'fan', 'FAN17G0221' => 'fan', 'FAN20G2492' => 'fan', 'FAN20G2905' => 'fan', 'FAN21G0548' => 'fan', 'FAN21G1300' => 'fan', 'FAN22G0077' => 'fan', 'FAN22G1315' => 'fan', 'FAN24G1280' => 'fan', 'FAN24G1445' => 'fan', 'FAN24G3527' => 'fan', 'FAN25G0464' => 'fan', 'FAN25G2885' => 'fan', 'FAN25G3270' => 'fan', 'FAN27G1101' => 'fan', 'FAN27G2846' => 'fan', 'FAN27G3524' => 'fan', 'FvH4_2g11770' => 'fve', 'FvH4_2g15630' => 'fve', 'FvH4_3g05570' => 'fve', 'FvH4_3g09110' => 'fve', 'FvH4_3g19940' => 'fve', 'FvH4_4g04821' => 'fve', 'FvH4_4g31480' => 'fve', 'FvH4_7g01740' => 'fve', 'Glyma.05G130400' => 'gma', 'Glyma.05G156400' => 'gma', 'Glyma.07G197000' => 'gma', 'Glyma.08G085151' => 'gma', 'Glyma.08G114500' => 'gma', 'Glyma.08G300400' => 'gma', 'Glyma.10G215800' => 'gma', 'Glyma.12G224400' => 'gma', 'Glyma.13G179300' => 'gma', 'Glyma.13G218151' => 'gma', 'Glyma.13G238800' => 'gma', 'Glyma.13G276900' => 'gma', 'Glyma.14G078200' => 'gma', 'Glyma.15G074500' => 'gma', 'Glyma.15G094100' => 'gma', 'Glyma.17G247200' => 'gma', 'Glyma.18G120100' => 'gma', 'Glyma.20G176000' => 'gma', 'Gohir.A01G063600' => 'ghi', 'Gohir.A01G170301' => 'ghi', 'Gohir.A02G060500' => 'ghi', 'Gohir.A05G133850' => 'ghi', 'Gohir.A05G161400' => 'ghi', 'Gohir.A06G012900' => 'ghi', 'Gohir.A06G035901' => 'ghi', 'Gohir.A06G127100' => 'ghi', 'Gohir.A06G210500' => 'ghi', 'Gohir.A08G008650' => 'ghi', 'Gohir.A09G072700' => 'ghi', 'Gohir.A09G088301' => 'ghi', 'Gohir.A10G040600' => 'ghi', 'Gohir.A12G036300' => 'ghi', 'Gohir.A12G143350' => 'ghi', 'Gohir.A12G165500' => 'ghi', 'Gohir.A13G145700' => 'ghi', 'Gohir.D01G050000' => 'ghi', 'Gohir.D01G051366' => 'ghi', 'Gohir.D01G161350' => 'ghi', 'Gohir.D02G065900' => 'ghi', 'Gohir.D05G164200' => 'ghi', 'Gohir.D05G355500' => 'ghi', 'Gohir.D06G010400' => 'ghi', 'Gohir.D06G111250' => 'ghi', 'Gohir.D06G132000' => 'ghi', 'Gohir.D06G210500' => 'ghi', 'Gohir.D07G165675' => 'ghi', 'Gohir.D08G062240' => 'ghi', 'Gohir.D08G086101' => 'ghi', 'Gohir.D08G138060' => 'ghi', 'Gohir.D09G072300' => 'ghi', 'Gohir.D10G041400' => 'ghi', 'Gohir.D11G191020' => 'ghi', 'Gohir.D11G212066' => 'ghi', 'Gohir.D12G036300' => 'ghi', 'Gohir.D12G168600' => 'ghi', 'Gohir.D13G150600' => 'ghi', 'Gorai.001G057300' => 'gra', 'Gorai.002G069900' => 'gra', 'Gorai.002G200000' => 'gra', 'Gorai.003G067600' => 'gra', 'Gorai.005G074800' => 'gra', 'Gorai.006G087300' => 'gra', 'Gorai.008G037500' => 'gra', 'Gorai.008G181400' => 'gra', 'Gorai.009G169400' => 'gra', 'Gorai.009G387900' => 'gra', 'Gorai.010G013300' => 'gra', 'Gorai.010G153800' => 'gra', 'Gorai.010G255800' => 'gra', 'Gorai.011G043700' => 'gra', 'Gorai.011G198900' => 'gra', 'Gorai.013G168400' => 'gra', 'GSVIVG01005212001' => 'vvi', 'GSVIVG01006163001' => 'vvi', 'GSVIVG01009625001' => 'vvi', 'GSVIVG01014338001' => 'vvi', 'GSVIVG01020005001' => 'vvi', 'GSVIVG01021450001' => 'vvi', 'GSVIVG01023975001' => 'vvi', 'GSVIVG01034490001' => 'vvi', 'HanXRQChr04g0112071' => 'han', 'HanXRQChr05g0131151' => 'han', 'HanXRQChr09g0262371' => 'han', 'HanXRQChr09g0268401' => 'han', 'HanXRQChr10g0279241' => 'han', 'HanXRQChr10g0297961' => 'han', 'HanXRQChr11g0326231' => 'han', 'HanXRQChr11g0328471' => 'han', 'HanXRQChr16g0507941' => 'han', 'HanXRQChr17g0560211' => 'han', 'Haze_02108' => 'cav', 'Haze_02428' => 'cav', 'Haze_05593' => 'cav', 'Haze_06448' => 'cav', 'Haze_09427' => 'cav', 'Haze_12022' => 'cav', 'Haze_17612' => 'cav', 'Haze_17928' => 'cav', 'Hma1.2p1_0032F.1_g019250' => 'hma', 'Hma1.2p1_0163F.1_g072690' => 'hma', 'Hma1.2p1_0265F.1_g106710' => 'hma', 'Hma1.2p1_0286F.1_g113970' => 'hma', 'Hma1.2p1_0363F.1_g136640' => 'hma', 'Hma1.2p1_0584F.1_g183470' => 'hma', 'Hma1.2p1_0885F.1_g232570' => 'hma', 'HPP92_006022' => 'vpl', 'HPP92_007320' => 'vpl', 'HPP92_011521' => 'vpl', 'HPP92_019387' => 'vpl', 'HPP92_024038' => 'vpl', 'Hund05891' => 'sun', 'Hund06450' => 'sun', 'Hund12053' => 'sun', 'Hund16800' => 'sun', 'Hund21222' => 'sun', 'Hund22896' => 'sun', 'Hund23746' => 'sun', 'Hund27083' => 'sun', 'Lalb_Chr02g0141831' => 'lal', 'Lalb_Chr02g0141841' => 'lal', 'Lalb_Chr05g0220411' => 'lal', 'Lalb_Chr06g0162081' => 'lal', 'Lalb_Chr09g0327651' => 'lal', 'Lalb_Chr13g0295051' => 'lal', 'Lalb_Chr15g0086801' => 'lal', 'Lalb_Chr16g0383781' => 'lal', 'Lalb_Chr16g0383791' => 'lal', 'Lalb_Chr18g0055441' => 'lal', 'Lalb_Chr18g0059611' => 'lal', 'Lalb_Chr20g0109661' => 'lal', 'Lalb_Chr20g0109831' => 'lal', 'Lalb_Chr20g0121871' => 'lal', 'Lalb_Chr22g0355361' => 'lal', 'Lalb_Chr25g0286371' => 'lal', 'Lj1A1187G43' => 'lonja', 'Lj1A1205T50' => 'lonja', 'Lj1A800G33' => 'lonja', 'Lj1C1187T7' => 'lonja', 'Lj1C843T11' => 'lonja', 'Lj1g0010940' => 'lja', 'Lj2A288T69' => 'lonja', 'Lj3g0024276' => 'lja', 'Lj4A47T76' => 'lonja', 'Lj4g0005805' => 'lja', 'Lj4g0006097' => 'lja', 'Lj4g0008528' => 'lja', 'Lj4g0024907' => 'lja', 'Lj5g0012472' => 'lja', 'Lj5g0018648' => 'lja', 'Lj6C789G1' => 'lonja', 'Lj6g0004000' => 'lja', 'Lj7A292G67' => 'lonja', 'Lj7A292T64' => 'lonja', 'Lj9A400T58' => 'lonja', 'Lsat_1_v5_gn_1_126181' => 'lsa', 'Lsat_1_v5_gn_4_123041' => 'lsa', 'Lsat_1_v5_gn_4_133620' => 'lsa', 'Lsat_1_v5_gn_4_53221' => 'lsa', 'Lsat_1_v5_gn_4_71961' => 'lsa', 'Lsat_1_v5_gn_7_105241' => 'lsa', 'Lsat_1_v5_gn_7_21361' => 'lsa', 'Lsat_1_v5_gn_7_28860' => 'lsa', 'Lsat_1_v5_gn_7_31260' => 'lsa', 'Lsat_1_v5_gn_8_52801' => 'lsa', 'Manes.02G191400' => 'mes', 'Manes.03G110100' => 'mes', 'Manes.04G071100' => 'mes', 'Manes.05G100500' => 'mes', 'Manes.05G164700' => 'mes', 'Manes.15G087000' => 'mes', 'Manes.15G121500' => 'mes', 'Manes.16G028300' => 'mes', 'Manes.17G046100' => 'mes', 'Manes.17G069800' => 'mes', 'Manes.18G100500' => 'mes', 'Mapoly0002s0109' => 'mpo', 'Mapoly0024s0007' => 'mpo', 'Mapoly0089s0032' => 'mpo', 'MBI04_g42241_MAGBIO' => 'mbi', 'MBI05_g11988_MAGBIO' => 'mbi', 'MBI05_g35452_MAGBIO' => 'mbi', 'MBI07_g30179_MAGBIO' => 'mbi', 'MBI07_g35859_MAGBIO' => 'mbi', 'MBI07_g35860_MAGBIO' => 'mbi', 'MBI07_g37166_MAGBIO' => 'mbi', 'MBI08_g18172_MAGBIO' => 'mbi', 'MBI09_g08441_MAGBIO' => 'mbi', 'MBI13_g01676_MAGBIO' => 'mbi', 'MBI14_g42955_MAGBIO' => 'mbi', 'MBI16_g13161_MAGBIO' => 'mbi', 'MBI17_g27204_MAGBIO' => 'mbi', 'MBI19_g21595_MAGBIO' => 'mbi', 'MD00G1148400' => 'mdo', 'MD02G1301200' => 'mdo', 'MD03G1227800' => 'mdo', 'MD05G1041100' => 'mdo', 'MD05G1124800' => 'mdo', 'MD05G1284000' => 'mdo', 'MD05G1338800' => 'mdo', 'MD05G1338900' => 'mdo', 'MD07G1022800' => 'mdo', 'MD10G1047500' => 'mdo', 'MD10G1127500' => 'mdo', 'MD10G1262300' => 'mdo', 'MD10G1293800' => 'mdo', 'MD16G1074300' => 'mdo', 'Medtr1g021670' => 'mtr', 'Medtr1g096320' => 'mtr', 'Medtr2g013690' => 'mtr', 'Medtr2g019450' => 'mtr', 'Medtr2g085170' => 'mtr', 'Medtr4g088785' => 'mtr', 'Medtr8g055930' => 'mtr', 'Medtr8g085850' => 'mtr', 'MELO3C002605.2' => 'cme', 'MELO3C003891.2' => 'cme', 'MELO3C004012.2' => 'cme', 'MELO3C007134.2' => 'cme', 'MELO3C008118.2' => 'cme', 'MELO3C016700.2' => 'cme', 'MELO3C024127.2' => 'cme', 'MELO3C033361.2' => 'cme', 'MELO3C033362.2' => 'cme', 'Migut.C00430' => 'egut', 'Migut.C01246' => 'egut', 'Migut.E00101' => 'egut', 'Migut.H01486' => 'egut', 'Migut.H01939' => 'egut', 'Migut.K00360' => 'egut', 'Migut.M00910' => 'egut', 'Migut.M01139' => 'egut', 'Migut.N02677' => 'egut', 'MSTRG.13252' => 'ama', 'MSTRG.14701' => 'ama', 'MSTRG.1521' => 'ama', 'MSTRG.15884' => 'ama', 'MSTRG.16242' => 'ama', 'MSTRG.22285' => 'ama', 'MSTRG.22444' => 'ama', 'MSTRG.2349' => 'ama', 'MSTRG.26308' => 'ama', 'MSTRG.28296' => 'ama', 'MSTRG.9895' => 'ama', 'Nitab4.5_0000110g0060' => 'nta', 'Nitab4.5_0000420g0130' => 'nta', 'Nitab4.5_0000422g0030' => 'nta', 'Nitab4.5_0000560g0180' => 'nta', 'Nitab4.5_0000703g0100' => 'nta', 'Nitab4.5_0000786g0200' => 'nta', 'Nitab4.5_0001336g0020' => 'nta', 'Nitab4.5_0001796g0030' => 'nta', 'Nitab4.5_0003348g0060' => 'nta', 'Nitab4.5_0003698g0040' => 'nta', 'Nitab4.5_0003942g0090' => 'nta', 'Nitab4.5_0004775g0070' => 'nta', 'Nitab4.5_0004864g0030' => 'nta', 'Nitab4.5_0005615g0020' => 'nta', 'Nitab4.5_0009288g0030' => 'nta', 'Nitab4.5_0009341g0010' => 'nta', 'Nitab4.5_0009535g0010' => 'nta', 'Nn1g03995' => 'nnu', 'Nn1g04100' => 'nnu', 'Nn1g06530' => 'nnu', 'Nn3g16404' => 'nnu', 'Nn3g17212' => 'nnu', 'Nn3g20776' => 'nnu', 'Nn3g21923' => 'nnu', 'Nn5g27737' => 'nnu', 'Nn5g29461' => 'nnu', 'Nn7g38355' => 'nnu', 'Nn8g39873' => 'nnu', 'Oeu000548.2' => 'oeu', 'Oeu004672.1' => 'oeu', 'Oeu015605.2' => 'oeu', 'Oeu016092.1' => 'oeu', 'Oeu017879.3' => 'oeu', 'Oeu024910.1' => 'oeu', 'Oeu028965.1' => 'oeu', 'Oeu031269.1' => 'oeu', 'Oeu031270.1' => 'oeu', 'Oeu032535.1' => 'oeu', 'Oeu034151.1' => 'oeu', 'Oeu034152.1' => 'oeu', 'Oeu034588.2' => 'oeu', 'Oeu050846.1' => 'oeu', 'Oeu050849.2' => 'oeu', 'Oeu051063.2' => 'oeu', 'Oeu052368.1' => 'oeu', 'Oeu052370.1' => 'oeu', 'Os01g0210400' => 'osa', 'Os01g0304300' => 'osa', 'Os01g0749100' => 'osa', 'Os02g0745800' => 'osa', 'Os03g0769050' => 'osa', 'Os05g0531500' => 'osa', 'Os06g0724300' => 'osa', 'Os11g0198100' => 'osa', 'Peaxi162Scf00069g01425' => 'pax', 'Peaxi162Scf00280g00811' => 'pax', 'Peaxi162Scf00310g00615' => 'pax', 'Peaxi162Scf00362g00542' => 'pax', 'Peaxi162Scf00461g00310' => 'pax', 'Peaxi162Scf00530g00118' => 'pax', 'Peaxi162Scf00541g00057' => 'pax', 'Peaxi162Scf00661g00017' => 'pax', 'Peaxi162Scf00926g00027' => 'pax', 'Peaxi162Scf01064g00263' => 'pax', 'Peaxi162Scf01211g00135' => 'pax', 'PGR004G2336' => 'pgr', 'PGR042G0327' => 'pgr', 'PGR042G1957' => 'pgr', 'PGR042G2003' => 'pgr', 'PGR042G3929' => 'pgr', 'PGR083G1137' => 'pgr', 'PGR083G1364' => 'pgr', 'PGSC0003DMG400003381' => 'stu', 'PGSC0003DMG400003417' => 'stu', 'PGSC0003DMG400008981' => 'stu', 'PGSC0003DMG400012417' => 'stu', 'PGSC0003DMG400012823' => 'stu', 'PGSC0003DMG400016885' => 'stu', 'PGSC0003DMG400022812' => 'stu', 'PGSC0003DMG400029726' => 'stu', 'PGSC0003DMG401009243' => 'stu', 'PGSC0003DMG401031505' => 'stu', 'PGSC0003DMG402031505' => 'stu', 'Phvul.001G017600' => 'pvu', 'Phvul.002G193500' => 'pvu', 'Phvul.002G228900' => 'pvu', 'Phvul.002G236800' => 'pvu', 'Phvul.003G049500' => 'pvu', 'Phvul.005G072000' => 'pvu', 'Phvul.006G164800' => 'pvu', 'Phvul.006G185100' => 'pvu', 'Phvul.007G090000' => 'pvu', 'Potri.001G399800' => 'ptr', 'Potri.002G149900' => 'ptr', 'Potri.004G044100' => 'ptr', 'Potri.004G177600' => 'ptr', 'Potri.009G138000' => 'ptr', 'Potri.010G094000' => 'ptr', 'Potri.011G053000' => 'ptr', 'Potri.011G119300' => 'ptr', 'Potri.013G113700' => 'ptr', 'Potri.018G107800' => 'ptr', 'Potri.019G084100' => 'ptr', 'Pp3c14_23720' => 'ppa', 'Pp3c16_6340' => 'ppa', 'Pp3c23_13420' => 'ppa', 'Pp3c24_2740' => 'ppa', 'Pp3c25_860' => 'ppa', 'Pp3c8_21750' => 'ppa', 'Prupe.1G273000' => 'ppe', 'Prupe.1G273700' => 'ppe', 'Prupe.1G274100' => 'ppe', 'Prupe.2G023300' => 'ppe', 'Prupe.4G048000' => 'ppe', 'Prupe.4G080400' => 'ppe', 'Prupe.4G181200' => 'ppe', 'Prupe.8G056900' => 'ppe', 'Prupe.8G168700' => 'ppe', 'Psat1g189080' => 'psa', 'Psat1g204760' => 'psa', 'Psat4g175560' => 'psa', 'Psat4g177720' => 'psa', 'Psat5g244240' => 'psa', 'Psat6g010720' => 'psa', 'Psat6g187200' => 'psa', 'Psat7g072040' => 'psa', 'PSO017G3501' => 'pso', 'PSO063G2148' => 'pso', 'PSO063G5608' => 'pso', 'PSO210G6392' => 'pso', 'PSO541G2319' => 'pso', 'PSO541G2836' => 'pso', 'PSO541G4012' => 'pso', 'PSO541G6253' => 'pso', 'PSO675G0580' => 'pso', 'PSO675G0856' => 'pso', 'PSO675G5635' => 'pso', 'PSO675G9157' => 'pso', 'PSO832G1660' => 'pso', 'PSO832G1969' => 'pso', 'QL02p007186' => 'qlo', 'QL02p033904' => 'qlo', 'QL03p064391' => 'qlo', 'QL05p040593' => 'qlo', 'QL05p058242' => 'qlo', 'QL08p021825' => 'qlo', 'QL11p004981' => 'qlo', 'RcHm_v2.0_Chr1g0318301' => 'rch', 'RcHm_v2.0_Chr4g0418501' => 'rch', 'RcHm_v2.0_Chr4g0439971' => 'rch', 'RcHm_v2.0_Chr5g0008541' => 'rch', 'RcHm_v2.0_Chr5g0014101' => 'rch', 'RcHm_v2.0_Chr5g0014131' => 'rch', 'RcHm_v2.0_Chr5g0033621' => 'rch', 'RcHm_v2.0_Chr6g0272041' => 'rch', 'RcHm_v2.0_Chr6g0278831' => 'rch', 'Rhsim02G0130400' => 'rsi', 'Rhsim02G0171100' => 'rsi', 'Rhsim05G0053000' => 'rsi', 'Rhsim05G0053100' => 'rsi', 'Rhsim06G0096500' => 'rsi', 'Rhsim06G0096600' => 'rsi', 'Rhsim06G0199100' => 'rsi', 'Rhsim12G0062300' => 'rsi', 'Rhsim12G0062800' => 'rsi', 'Sabra02G0118600' => 'sbr', 'Sabra04G0027300' => 'sbr', 'Sabra04G0119500' => 'sbr', 'Sabra08G0112500' => 'sbr', 'Sabra11G0036800' => 'sbr', 'Sabra11G0103800' => 'sbr', 'Sabra13G0096300' => 'sbr', 'Sabra16G0262300' => 'sbr', 'Sabra18G0091700' => 'sbr', 'Sabra19G0095400' => 'sbr', 'SalBow6G3080' => 'sbo', 'SalBow7G1157' => 'sbo', 'SalBow7G2123' => 'sbo', 'SalBow7G2285' => 'sbo', 'SalBow7G3537' => 'sbo', 'SalBow8G2947' => 'sbo', 'SalBow8G4463' => 'sbo', 'SalBow8G5466' => 'sbo', 'Sc01g0001750' => 'sci', 'Sc02g0006640' => 'sci', 'Sc02g0006670' => 'sci', 'Sc04g0008220' => 'sci', 'Sc05g0006190' => 'sci', 'Sc08g0002760' => 'sci', 'Sc17g0006170' => 'sci', 'Sc22g0002050' => 'sci', 'Sc23g0001190' => 'sci', 'Sc24g0000980' => 'sci', 'Sed0006245' => 'sed', 'Sed0007543' => 'sed', 'Sed0009411' => 'sed', 'Sed0010765' => 'sed', 'Sed0012944' => 'sed', 'Sed0014682' => 'sed', 'Sed0016174' => 'sed', 'Sed0016796' => 'sed', 'Sed0020317' => 'sed', 'Sed0021467' => 'sed', 'SEGI_01316' => 'sgi', 'SEGI_03374' => 'sgi', 'SEGI_16265' => 'sgi', 'SEGI_18569' => 'sgi', 'SEGI_20351' => 'sgi', 'SEGI_26395' => 'sgi', 'SEGI_29469' => 'sgi', 'SEGI_34771' => 'sgi', 'SEGI_36769' => 'sgi', 'SEGI_37139' => 'sgi', 'SGA_v2.0_scaffold100G29687' => 'sas', 'SGA_v2.0_scaffold118G32472' => 'sas', 'SGA_v2.0_scaffold14G07051' => 'sas', 'SGA_v2.0_scaffold183G39845' => 'sas', 'SGA_v2.0_scaffold1G00174' => 'sas', 'SGA_v2.0_scaffold22G09714' => 'sas', 'SGA_v2.0_scaffold333G48992' => 'sas', 'SGA_v2.0_scaffold46G17491' => 'sas', 'SGA_v2.0_scaffold49G18294' => 'sas', 'SGA_v2.0_scaffold63G21658' => 'sas', 'SHI01741' => 'shi', 'SHI05771' => 'shi', 'SHI18077' => 'shi', 'SHI20525' => 'shi', 'SHI20527' => 'shi', 'SHI20528' => 'shi', 'SMO172G0185' => 'smo', 'SMO198G0020' => 'smo', 'SMO351G0006' => 'smo', 'SMO356G0118' => 'smo', 'SMO358G0296' => 'smo', 'SMO367G0079' => 'smo', 'SMO367G1277' => 'smo', 'Solyc01g014220.3' => 'sly', 'Solyc01g111770.2' => 'sly', 'Solyc02g078180.3' => 'sly', 'Solyc03g006430.3' => 'sly', 'Solyc03g006456.1' => 'sly', 'Solyc03g079860.2' => 'sly', 'Solyc04g079770.3' => 'sly', 'Solyc05g007430.4' => 'sly', 'Solyc07g063150.3' => 'sly', 'Solyc08g016620.3' => 'sly', 'Solyc09g057590.3' => 'sly', 'Solyc09g057600.1' => 'sly', 'Solyc10g009050.3' => 'sly', 'Solyc11g017420.2' => 'sly', 'Sopen01g053810' => 'spe', 'Sopen02g023040' => 'spe', 'Sopen03g002440' => 'spe', 'Sopen04g033350' => 'spe', 'Sopen05g003310' => 'spe', 'Sopen07g004050' => 'spe', 'Sopen07g031340' => 'spe', 'Sopen08g006990' => 'spe', 'Sopen10g004830' => 'spe', 'Sopen11g009370' => 'spe', 'Sp1g24450' => 'spa', 'Sp1g29670' => 'spa', 'Sp1g39600' => 'spa', 'Sp2g11080' => 'spa', 'Sp2g13970' => 'spa', 'Sp4g16130' => 'spa', 'Sp6g13080' => 'spa', 'Sp7g37270' => 'spa', 'TAR371G0065' => 'tar', 'TAR376G0340' => 'tar', 'TAR376G0435' => 'tar', 'TAR381G0002' => 'tar', 'TAR381G1236' => 'tar', 'TAR624G0055' => 'tar', 'TAR624G0324' => 'tar', 'TAR624G0696' => 'tar', 'TAR624G0906' => 'tar', 'TAR625G0107' => 'tar', 'TAR626G0015' => 'tar', 'TAR626G1356' => 'tar', 'TAR627G0888' => 'tar', 'TAR628G0399' => 'tar', 'TAR628G1327' => 'tar', 'TAR629G2831' => 'tar', 'TAR629G2874' => 'tar', 'TAR633G1432' => 'tar', 'TAR633G2771' => 'tar', 'THA.LOC104803394' => 'tha', 'THA.LOC104805153' => 'tha', 'THA.LOC104806784' => 'tha', 'THA.LOC104810473' => 'tha', 'THA.LOC104813100' => 'tha', 'THA.LOC104814215' => 'tha', 'THA.LOC104815554' => 'tha', 'THA.LOC104820544' => 'tha', 'THA.LOC104824754' => 'tha', 'THA.LOC104827717' => 'tha', 'Thecc.02G031400' => 'tca', 'Thecc.02G055900' => 'tca', 'Thecc.02G350800' => 'tca', 'Thecc.06G150900' => 'tca', 'Thecc.06G186600' => 'tca', 'Thecc.07G089600' => 'tca', 'Thecc.08G020400' => 'tca', 'Thecc.08G182100' => 'tca', 'Thhalv10000873m.g' => 'esa', 'Thhalv10004185m.g' => 'esa', 'Thhalv10006981m.g' => 'esa', 'Thhalv10007204m.g' => 'esa', 'Thhalv10011374m.g' => 'esa', 'Thhalv10013482m.g' => 'esa', 'Thhalv10017801m.g' => 'esa', 'Thhalv10024983m.g' => 'esa', 'TPR.G12072' => 'tpr', 'TPR.G15769' => 'tpr', 'TPR.G16504' => 'tpr', 'TPR.G16506' => 'tpr', 'TPR.G24345' => 'tpr', 'TPR.G26666' => 'tpr', 'TPR.G27320' => 'tpr', 'TPR.G31819' => 'tpr', 'TPR.G38879' => 'tpr', 'TPR.G39015' => 'tpr', 'TPR.G8819' => 'tpr', 'TWI09G0924' => 'twi', 'TWI12G0811' => 'twi', 'TWI12G1294' => 'twi', 'TWI31G0150' => 'twi', 'TWI36G1262' => 'twi', 'TWI38G1287' => 'twi', 'TWI38G1633' => 'twi', 'TWI38G1982' => 'twi', 'TWI39G0116' => 'twi', 'TWI60G1011' => 'twi', 'TWI63G0171' => 'twi', 'TWI73G0839' => 'twi', 'TWI79G1511' => 'twi', 'unitig_0.g915' => 'ugi', 'unitig_0.g916' => 'ugi', 'unitig_21.g20219' => 'ugi', 'unitig_21.g20416' => 'ugi', 'unitig_578.g16132' => 'ugi', 'unitig_578.g16718' => 'ugi', 'unitig_62.g23481' => 'ugi', 'unitig_744.g24535' => 'ugi', 'unitig_749.g13525' => 'ugi', 'vmacro01248' => 'vma', 'vmacro02290' => 'vma', 'vmacro10946' => 'vma', 'vmacro11865' => 'vma', 'vmacro12493' => 'vma', 'vmacro17322' => 'vma', 'vmacro21599' => 'vma', 'vmacro23041' => 'vma', 'VMungo0251G0004' => 'vmu', 'VMungo0251G2639' => 'vmu', 'VMungo0251G2967' => 'vmu', 'VMungo0540G0864' => 'vmu', 'VMungo0540G1569' => 'vmu', 'VMungo0647G0317' => 'vmu', 'VMungo0720G1373' => 'vmu', 'VMungo0720G1508' => 'vmu', 'VMungo1080G0485' => 'vmu', 'VMungo1215G3177' => 'vmu', 'Zm00001eb112600' => 'zma', 'Zm00001eb120220' => 'zma', 'Zm00001eb153240' => 'zma', 'Zm00001eb168880' => 'zma', 'Zm00001eb213920' => 'zma', 'Zm00001eb228280' => 'zma', 'Zm00001eb254580' => 'zma', 'Zm00001eb272180' => 'zma', 'Zm00001eb293190' => 'zma', 'Zm00001eb322930' => 'zma', 'Zm00001eb353360' => 'zma', 'Zm00001eb353390' => 'zma', 'Zm00001eb353430' => 'zma', 'Zm00001eb353440' => 'zma', 'Zm00001eb353780' => 'zma' ), 'gf_id' => 'HOM05D000499', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000499' ), 'data_identifier' => 'HOM05D000499', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000499', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1066', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p29780' => 'bna', 'A02p33180' => 'bna', 'A03p16470' => 'bna', 'A03p66010' => 'bna', 'A04p25970' => 'bna', 'A06p01270' => 'bna', 'A06p46080' => 'bna', 'A07p11400' => 'bna', 'A08p01840' => 'bna', 'A08p08230' => 'bna', 'A08p25740' => 'bna', 'A09p32070' => 'bna', 'A09p37830' => 'bna', 'A09p42840' => 'bna', 'A09p42850' => 'bna', 'Aa31LG10G2060' => 'aar', 'Aa31LG2G7410' => 'aar', 'Aa31LG6G10200' => 'aar', 'Aa31LG6G16680' => 'aar', 'Aa31LG6G8470' => 'aar', 'Aa31LG9G12730' => 'aar', 'Aa31LG9G13680' => 'aar', 'Aa31LG9G14920' => 'aar', 'Aa31LG9G6650' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4977' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5467' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3254' => 'aag', 'Actinidia02578' => 'ach', 'Actinidia07693' => 'ach', 'Actinidia08413' => 'ach', 'Actinidia08414' => 'ach', 'Actinidia15289' => 'ach', 'Actinidia19871' => 'ach', 'Actinidia21475' => 'ach', 'Actinidia22576' => 'ach', 'Actinidia28327' => 'ach', 'Actinidia32491' => 'ach', 'Actinidia39463' => 'ach', 'Actinidia39571' => 'ach', 'Ah.01g013750' => 'amhyb', 'Ah.01g023210' => 'amhyb', 'Ah.04g164850' => 'amhyb', 'Ah.05g178060' => 'amhyb', 'Ah.07g204270' => 'amhyb', 'Ah.07g208480' => 'amhyb', 'Ah.09g237410' => 'amhyb', 'Ah.14g089460' => 'amhyb', 'AL1G41790' => 'aly', 'AL1G49050' => 'aly', 'AL1G53810' => 'aly', 'AL1G61400' => 'aly', 'AL4G18580' => 'aly', 'AL5G12510' => 'aly', 'AL5G12540' => 'aly', 'AL6G43230' => 'aly', 'AL7G10370' => 'aly', 'AL7G19250' => 'aly', 'AL8G12240' => 'aly', 'AL8G18540' => 'aly', 'Aqoxy1G02409' => 'aox', 'Aqoxy2G03993' => 'aox', 'Aqoxy3G03357' => 'aox', 'Aqoxy4G00785' => 'aox', 'Aqoxy5G02598' => 'aox', 'Aqoxy6G00132' => 'aox', 'Aqoxy7G01776' => 'aox', 'Aqoxy7G02316' => 'aox', 'Aqoxy7G03973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.12AFKW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B8730' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27IQR1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3F75VG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3RE0GA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41TCQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.527VTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FIR39' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5W8UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DA38EV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ63HS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H1I32C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HC27T5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4M8AP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7N3CZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9UVDZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LS1NQA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT1D4B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SKC4TM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCFV76' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF9Q1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQWD9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1ZM88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WE07RT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YCK7VH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJE6Q6' => 'arhy', 'AT1G28240' => 'ath', 'AT1G34550' => 'ath', 'AT1G53040' => 'ath', 'AT2G02910' => 'ath', 'AT4G09630' => 'ath', 'AT4G38500' => 'ath', 'AT5G42660' => 'ath', 'AT5G46220' => 'ath', 'ATR0152G026' => 'atr', 'ATR0564G343' => 'atr', 'ATR0706G151' => 'atr', 'ATR0733G207' => 'atr', 'ATR0751G234' => 'atr', 'ATR0807G048' => 'atr', 'ATR1091G084' => 'atr', 'Atru.chr10.1229' => 'acertr', 'Atru.chr10.1230' => 'acertr', 'Atru.chr10.1874' => 'acertr', 'Atru.chr11.1808' => 'acertr', 'Atru.chr13.1795' => 'acertr', 'Atru.chr13.570' => 'acertr', 'Atru.chr2.2608' => 'acertr', 'Atru.chr2.2609' => 'acertr', 'Atru.chr5.3428' => 'acertr', 'Atru.chr8.1171' => 'acertr', 'AUR62004651' => 'cqu', 'AUR62008675' => 'cqu', 'AUR62010014' => 'cqu', 'AUR62013004' => 'cqu', 'AUR62014825' => 'cqu', 'AUR62015015' => 'cqu', 'AUR62015151' => 'cqu', 'AUR62017020' => 'cqu', 'AUR62019422' => 'cqu', 'AUR62023570' => 'cqu', 'AUR62025571' => 'cqu', 'AUR62029098' => 'cqu', 'AUR62033863' => 'cqu', 'AUR62034296' => 'cqu', 'AUR62040075' => 'cqu', 'BcaB02g07334' => 'bca', 'BcaB02g10575' => 'bca', 'BcaB03g12119' => 'bca', 'BcaB03g12120' => 'bca', 'BcaB03g13945' => 'bca', 'BcaB04g17123' => 'bca', 'BcaB04g17867' => 'bca', 'BcaB04g19839' => 'bca', 'BcaB07g30317' => 'bca', 'BcaB07g32432' => 'bca', 'BcaB07g33362' => 'bca', 'BcaB08g36611' => 'bca', 'BcaC01g00028' => 'bca', 'BcaC01g01356' => 'bca', 'BcaC01g02034' => 'bca', 'BcaC01g06051' => 'bca', 'BcaC03g16839' => 'bca', 'BcaC03g17176' => 'bca', 'BcaC05g26829' => 'bca', 'BcaC06g31490' => 'bca', 'BcaC06g35344' => 'bca', 'BcaC06g36570' => 'bca', 'BcaC07g37537' => 'bca', 'BcaC08g43491' => 'bca', 'BcaC08g43773' => 'bca', 'BcaNung00234' => 'bca', 'BcaNung01982' => 'bca', 'BcaNung03707' => 'bca', 'BcaNung06454' => 'bca', 'BolC2t10762H' => 'bol', 'BolC2t11191H' => 'bol', 'BolC3t14322H' => 'bol', 'BolC3t19747H' => 'bol', 'BolC3t21425H' => 'bol', 'BolC4t27800H' => 'bol', 'BolC5t31423H' => 'bol', 'BolC6t35951H' => 'bol', 'BolC6t36282H' => 'bol', 'BolC7t40678H' => 'bol', 'BolC7t40679H' => 'bol', 'BolC7t42222H' => 'bol', 'BolC7t43492H' => 'bol', 'BolC7t46785H' => 'bol', 'BolC8t47853H' => 'bol', 'BolC9t56805H' => 'bol', 'BraA02t08000Z' => 'bra', 'BraA02t08341Z' => 'bra', 'BraA03t10936Z' => 'bra', 'BraA03t15657Z' => 'bra', 'BraA04t18100Z' => 'bra', 'BraA05t20523Z' => 'bra', 'BraA06t23353Z' => 'bra', 'BraA06t27473Z' => 'bra', 'BraA06t27769Z' => 'bra', 'BraA07t28928Z' => 'bra', 'BraA08t32236Z' => 'bra', 'BraA08t32841Z' => 'bra', 'BraA08t34524Z' => 'bra', 'BraA09t38742Z' => 'bra', 'BraA09t39295Z' => 'bra', 'C02p47180' => 'bna', 'C02p50990' => 'bna', 'C03p19360' => 'bna', 'C03p74950' => 'bna', 'C03p91000' => 'bna', 'C04p63260' => 'bna', 'C05p27050' => 'bna', 'C06p08750' => 'bna', 'C06p11490' => 'bna', 'C07p02820' => 'bna', 'C07p17180' => 'bna', 'C07p29440' => 'bna', 'C07p63730' => 'bna', 'C09p39260' => 'bna', 'CAN.G1164.34' => 'can', 'CAN.G1164.39' => 'can', 'CAN.G1530.3' => 'can', 'CAN.G162.61' => 'can', 'CAN.G176.6' => 'can', 'CAN.G289.49' => 'can', 'CAN.G370.21' => 'can', 'CAN.G370.22' => 'can', 'CAN.G371.117' => 'can', 'CAN.G58.37' => 'can', 'CAN.G588.98' => 'can', 'CANSAT21G2266' => 'cansat', 'CANSAT25G2799' => 'cansat', 'CANSAT35G0862' => 'cansat', 'CANSAT35G1704' => 'cansat', 'CANSAT35G1760' => 'cansat', 'CANSAT56G3971' => 'cansat', 'CANSAT56G4116' => 'cansat', 'CANSAT80G1259' => 'cansat', 'CARHR027730' => 'chi', 'CARHR033880' => 'chi', 'CARHR043270' => 'chi', 'CARHR145330' => 'chi', 'CARHR145340' => 'chi', 'CARHR175570' => 'chi', 'CARHR181570' => 'chi', 'CARHR258470' => 'chi', 'CARHR260490' => 'chi', 'CARHR294220' => 'chi', 'Carub.0001s2668' => 'cru', 'Carub.0001s3257' => 'cru', 'Carub.0001s4220' => 'cru', 'Carub.0005s0179' => 'cru', 'Carub.0006s2807' => 'cru', 'Carub.0007s0039' => 'cru', 'Carub.0008s0169' => 'cru', 'Carub.0008s0636' => 'cru', 'Ca_00338_v3' => 'car', 'Ca_00542_v3' => 'car', 'Ca_01844_v3' => 'car', 'Ca_10611_v3' => 'car', 'Ca_13326_v3' => 'car', 'Ca_17944_v3' => 'car', 'Ca_18546_v3' => 'car', 'Ca_24219_v3' => 'car', 'Ca_29972_v3' => 'car', 'CBR_g3681' => 'cbr', 'CBR_g40021' => 'cbr', 'Cc01_g08140' => 'ccan', 'Cc02_g13410' => 'ccan', 'Cc02_g37480' => 'ccan', 'Cc05_g12030' => 'ccan', 'Cc09_g03370' => 'ccan', 'Cc09_g10300' => 'ccan', 'Cc10_g03530' => 'ccan', 'Cc10_g11380' => 'ccan', 'CDE01G0176' => 'cde', 'CDE02G0675' => 'cde', 'CDE02G0942' => 'cde', 'CDE02G1153' => 'cde', 'CDE02G4177' => 'cde', 'CDE04G2117' => 'cde', 'CDE04G2736' => 'cde', 'CDE08G1161' => 'cde', 'CDE09G1238' => 'cde', 'Cfa000467' => 'cfa', 'Cfa000947' => 'cfa', 'Cfa004969' => 'cfa', 'Cfa005284' => 'cfa', 'Cfa008993' => 'cfa', 'Cfa018187' => 'cfa', 'Cfa018454' => 'cfa', 'Cfa020585' => 'cfa', 'Ciclev10000424m.g' => 'ccl', 'Ciclev10003605m.g' => 'ccl', 'Ciclev10007828m.g' => 'ccl', 'Ciclev10014620m.g' => 'ccl', 'Ciclev10015169m.g' => 'ccl', 'Ciclev10018291m.g' => 'ccl', 'Ciclev10028256m.g' => 'ccl', 'Ciclev10033822m.g' => 'ccl', 'CiPaw.05G060300' => 'cil', 'CiPaw.05G085000' => 'cil', 'CiPaw.06G083700' => 'cil', 'CiPaw.06G120300' => 'cil', 'CiPaw.09G060500' => 'cil', 'CiPaw.09G123800' => 'cil', 'CiPaw.11G169700' => 'cil', 'CiPaw.12G118300' => 'cil', 'CiPaw.15G071000' => 'cil', 'CiPaw.15G081900' => 'cil', 'ClCG01G024610' => 'cla', 'ClCG03G006070' => 'cla', 'ClCG05G019250' => 'cla', 'ClCG09G009500' => 'cla', 'ClCG11G008200' => 'cla', 'ClCG11G018080' => 'cla', 'COL.COLO4_17373' => 'col', 'COL.COLO4_22994' => 'col', 'COL.COLO4_26389' => 'col', 'COL.COLO4_27170' => 'col', 'COL.COLO4_31074' => 'col', 'COL.COLO4_31465' => 'col', 'COL.COLO4_36438' => 'col', 'COL.COLO4_36439' => 'col', 'Cpa.g.c38781' => 'cpa', 'Cpa.g.sc128.12' => 'cpa', 'Cpa.g.sc166.7' => 'cpa', 'Cpa.g.sc166.8' => 'cpa', 'Cpa.g.sc20.111' => 'cpa', 'Cpa.g.sc27.31' => 'cpa', 'Cpa.g.sc64.36' => 'cpa', 'Cpa.g.sc64.37' => 'cpa', 'Cpa.g.sc66.49' => 'cpa', 'Cpa.g.sc80.64' => 'cpa', 'CsaV3_1G012320' => 'csa', 'CsaV3_2G008480' => 'csa', 'CsaV3_2G033450' => 'csa', 'CsaV3_3G044830' => 'csa', 'CsaV3_4G033710' => 'csa', 'CsaV3_6G051730' => 'csa', 'CsaV3_7G025350' => 'csa', 'CSS0001067' => 'camsi', 'CSS0005996' => 'camsi', 'CSS0006590' => 'camsi', 'CSS0009673' => 'camsi', 'CSS0010201' => 'camsi', 'CSS0010549' => 'camsi', 'CSS0011364' => 'camsi', 'CSS0014473' => 'camsi', 'CSS0014961' => 'camsi', 'CSS0020191' => 'camsi', 'CSS0021165' => 'camsi', 'CSS0022306' => 'camsi', 'CSS0030591' => 'camsi', 'CSS0030696' => 'camsi', 'CSS0032653' => 'camsi', 'CSS0037487' => 'camsi', 'CSS0041102' => 'camsi', 'CSS0041261' => 'camsi', 'CSS0046246' => 'camsi', 'CSS0049256' => 'camsi', 'DCAR_004075' => 'dca', 'DCAR_011538' => 'dca', 'DCAR_019553' => 'dca', 'DCAR_020952' => 'dca', 'DCAR_021739' => 'dca', 'DCAR_027407' => 'dca', 'DCAR_027913' => 'dca', 'DCAR_028066' => 'dca', 'Dinv05899' => 'din', 'Dinv07563' => 'din', 'Dinv08010' => 'din', 'Dinv14125' => 'din', 'Dinv20172' => 'din', 'Dinv30743' => 'din', 'Dinv31229' => 'din', 'Dinv34162' => 'din', 'Dinv36028' => 'din', 'Dinv39368' => 'din', 'Dinv40565' => 'din', 'Dinv41706' => 'din', 'Duzib052G0089' => 'dzi', 'Duzib116G0641' => 'dzi', 'Duzib132G0069' => 'dzi', 'Duzib132G1219' => 'dzi', 'Duzib147G0278' => 'dzi', 'Duzib160G0480' => 'dzi', 'Duzib170G0661' => 'dzi', 'Duzib177G0591' => 'dzi', 'Duzib187G1353' => 'dzi', 'Duzib192G0858' => 'dzi', 'Duzib192G0883' => 'dzi', 'Duzib213G0506' => 'dzi', 'Duzib235G0289' => 'dzi', 'Duzib251G0422' => 'dzi', 'ECA232G3898' => 'eca', 'ECA233G5950' => 'eca', 'ECA234G1699' => 'eca', 'ECA234G2421' => 'eca', 'ECA236G0426' => 'eca', 'ECA236G4331' => 'eca', 'ECA248G2573' => 'eca', 'EL10Ac1g00077' => 'bvu', 'EL10Ac1g01746' => 'bvu', 'EL10Ac2g03464' => 'bvu', 'EL10Ac4g08176' => 'bvu', 'EL10Ac7g17521' => 'bvu', 'EL10Ac8g20386' => 'bvu', 'EL10Ac9g21343' => 'bvu', 'EL10Ac9g22688' => 'bvu', 'Eucgr.B03434' => 'egr', 'Eucgr.D00618' => 'egr', 'Eucgr.E02395' => 'egr', 'Eucgr.F01129' => 'egr', 'Eucgr.F02622' => 'egr', 'Eucgr.F04207' => 'egr', 'FAN01G0570' => 'fan', 'FAN03G3351' => 'fan', 'FAN06G3702' => 'fan', 'FAN07G2149' => 'fan', 'FAN10G3758' => 'fan', 'FAN11G1170' => 'fan', 'FAN11G2050' => 'fan', 'FAN11G2724' => 'fan', 'FAN12G1700' => 'fan', 'FAN12G2028' => 'fan', 'FAN15G1160' => 'fan', 'FAN15G3063' => 'fan', 'FAN16G2540' => 'fan', 'FAN16G3077' => 'fan', 'FAN16G3624' => 'fan', 'FAN17G0221' => 'fan', 'FAN20G2492' => 'fan', 'FAN20G2905' => 'fan', 'FAN21G0548' => 'fan', 'FAN21G1300' => 'fan', 'FAN22G0077' => 'fan', 'FAN22G1315' => 'fan', 'FAN24G1280' => 'fan', 'FAN24G1445' => 'fan', 'FAN24G3527' => 'fan', 'FAN25G0464' => 'fan', 'FAN25G2885' => 'fan', 'FAN25G3270' => 'fan', 'FAN27G1101' => 'fan', 'FAN27G2846' => 'fan', 'FAN27G3524' => 'fan', 'FvH4_2g11770' => 'fve', 'FvH4_2g15630' => 'fve', 'FvH4_3g05570' => 'fve', 'FvH4_3g09110' => 'fve', 'FvH4_3g19940' => 'fve', 'FvH4_4g04821' => 'fve', 'FvH4_4g31480' => 'fve', 'FvH4_7g01740' => 'fve', 'Glyma.05G130400' => 'gma', 'Glyma.05G156400' => 'gma', 'Glyma.07G197000' => 'gma', 'Glyma.08G085151' => 'gma', 'Glyma.08G114500' => 'gma', 'Glyma.08G300400' => 'gma', 'Glyma.10G215800' => 'gma', 'Glyma.12G224400' => 'gma', 'Glyma.13G179300' => 'gma', 'Glyma.13G218151' => 'gma', 'Glyma.13G238800' => 'gma', 'Glyma.13G276900' => 'gma', 'Glyma.14G078200' => 'gma', 'Glyma.15G074500' => 'gma', 'Glyma.15G094100' => 'gma', 'Glyma.17G247200' => 'gma', 'Glyma.18G120100' => 'gma', 'Glyma.20G176000' => 'gma', 'Gohir.A01G063600' => 'ghi', 'Gohir.A01G170301' => 'ghi', 'Gohir.A02G060500' => 'ghi', 'Gohir.A05G133850' => 'ghi', 'Gohir.A05G161400' => 'ghi', 'Gohir.A06G012900' => 'ghi', 'Gohir.A06G035901' => 'ghi', 'Gohir.A06G127100' => 'ghi', 'Gohir.A06G210500' => 'ghi', 'Gohir.A08G008650' => 'ghi', 'Gohir.A09G072700' => 'ghi', 'Gohir.A09G088301' => 'ghi', 'Gohir.A10G040600' => 'ghi', 'Gohir.A12G036300' => 'ghi', 'Gohir.A12G143350' => 'ghi', 'Gohir.A12G165500' => 'ghi', 'Gohir.A13G145700' => 'ghi', 'Gohir.D01G050000' => 'ghi', 'Gohir.D01G051366' => 'ghi', 'Gohir.D01G161350' => 'ghi', 'Gohir.D02G065900' => 'ghi', 'Gohir.D05G164200' => 'ghi', 'Gohir.D05G355500' => 'ghi', 'Gohir.D06G010400' => 'ghi', 'Gohir.D06G111250' => 'ghi', 'Gohir.D06G132000' => 'ghi', 'Gohir.D06G210500' => 'ghi', 'Gohir.D07G165675' => 'ghi', 'Gohir.D08G062240' => 'ghi', 'Gohir.D08G086101' => 'ghi', 'Gohir.D08G138060' => 'ghi', 'Gohir.D09G072300' => 'ghi', 'Gohir.D10G041400' => 'ghi', 'Gohir.D11G191020' => 'ghi', 'Gohir.D11G212066' => 'ghi', 'Gohir.D12G036300' => 'ghi', 'Gohir.D12G168600' => 'ghi', 'Gohir.D13G150600' => 'ghi', 'Gorai.001G057300' => 'gra', 'Gorai.002G069900' => 'gra', 'Gorai.002G200000' => 'gra', 'Gorai.003G067600' => 'gra', 'Gorai.005G074800' => 'gra', 'Gorai.006G087300' => 'gra', 'Gorai.008G037500' => 'gra', 'Gorai.008G181400' => 'gra', 'Gorai.009G169400' => 'gra', 'Gorai.009G387900' => 'gra', 'Gorai.010G013300' => 'gra', 'Gorai.010G153800' => 'gra', 'Gorai.010G255800' => 'gra', 'Gorai.011G043700' => 'gra', 'Gorai.011G198900' => 'gra', 'Gorai.013G168400' => 'gra', 'GSVIVG01005212001' => 'vvi', 'GSVIVG01006163001' => 'vvi', 'GSVIVG01009625001' => 'vvi', 'GSVIVG01014338001' => 'vvi', 'GSVIVG01020005001' => 'vvi', 'GSVIVG01021450001' => 'vvi', 'GSVIVG01023975001' => 'vvi', 'GSVIVG01034490001' => 'vvi', 'HanXRQChr04g0112071' => 'han', 'HanXRQChr05g0131151' => 'han', 'HanXRQChr09g0262371' => 'han', 'HanXRQChr09g0268401' => 'han', 'HanXRQChr10g0279241' => 'han', 'HanXRQChr10g0297961' => 'han', 'HanXRQChr11g0326231' => 'han', 'HanXRQChr11g0328471' => 'han', 'HanXRQChr16g0507941' => 'han', 'HanXRQChr17g0560211' => 'han', 'Haze_02108' => 'cav', 'Haze_02428' => 'cav', 'Haze_05593' => 'cav', 'Haze_06448' => 'cav', 'Haze_09427' => 'cav', 'Haze_12022' => 'cav', 'Haze_17612' => 'cav', 'Haze_17928' => 'cav', 'Hma1.2p1_0032F.1_g019250' => 'hma', 'Hma1.2p1_0163F.1_g072690' => 'hma', 'Hma1.2p1_0265F.1_g106710' => 'hma', 'Hma1.2p1_0286F.1_g113970' => 'hma', 'Hma1.2p1_0363F.1_g136640' => 'hma', 'Hma1.2p1_0584F.1_g183470' => 'hma', 'Hma1.2p1_0885F.1_g232570' => 'hma', 'HPP92_006022' => 'vpl', 'HPP92_007320' => 'vpl', 'HPP92_011521' => 'vpl', 'HPP92_019387' => 'vpl', 'HPP92_024038' => 'vpl', 'Hund05891' => 'sun', 'Hund06450' => 'sun', 'Hund12053' => 'sun', 'Hund16800' => 'sun', 'Hund21222' => 'sun', 'Hund22896' => 'sun', 'Hund23746' => 'sun', 'Hund27083' => 'sun', 'Lalb_Chr02g0141831' => 'lal', 'Lalb_Chr02g0141841' => 'lal', 'Lalb_Chr05g0220411' => 'lal', 'Lalb_Chr06g0162081' => 'lal', 'Lalb_Chr09g0327651' => 'lal', 'Lalb_Chr13g0295051' => 'lal', 'Lalb_Chr15g0086801' => 'lal', 'Lalb_Chr16g0383781' => 'lal', 'Lalb_Chr16g0383791' => 'lal', 'Lalb_Chr18g0055441' => 'lal', 'Lalb_Chr18g0059611' => 'lal', 'Lalb_Chr20g0109661' => 'lal', 'Lalb_Chr20g0109831' => 'lal', 'Lalb_Chr20g0121871' => 'lal', 'Lalb_Chr22g0355361' => 'lal', 'Lalb_Chr25g0286371' => 'lal', 'Lj1A1187G43' => 'lonja', 'Lj1A1205T50' => 'lonja', 'Lj1A800G33' => 'lonja', 'Lj1C1187T7' => 'lonja', 'Lj1C843T11' => 'lonja', 'Lj1g0010940' => 'lja', 'Lj2A288T69' => 'lonja', 'Lj3g0024276' => 'lja', 'Lj4A47T76' => 'lonja', 'Lj4g0005805' => 'lja', 'Lj4g0006097' => 'lja', 'Lj4g0008528' => 'lja', 'Lj4g0024907' => 'lja', 'Lj5g0012472' => 'lja', 'Lj5g0018648' => 'lja', 'Lj6C789G1' => 'lonja', 'Lj6g0004000' => 'lja', 'Lj7A292G67' => 'lonja', 'Lj7A292T64' => 'lonja', 'Lj9A400T58' => 'lonja', 'Lsat_1_v5_gn_1_126181' => 'lsa', 'Lsat_1_v5_gn_4_123041' => 'lsa', 'Lsat_1_v5_gn_4_133620' => 'lsa', 'Lsat_1_v5_gn_4_53221' => 'lsa', 'Lsat_1_v5_gn_4_71961' => 'lsa', 'Lsat_1_v5_gn_7_105241' => 'lsa', 'Lsat_1_v5_gn_7_21361' => 'lsa', 'Lsat_1_v5_gn_7_28860' => 'lsa', 'Lsat_1_v5_gn_7_31260' => 'lsa', 'Lsat_1_v5_gn_8_52801' => 'lsa', 'Manes.02G191400' => 'mes', 'Manes.03G110100' => 'mes', 'Manes.04G071100' => 'mes', 'Manes.05G100500' => 'mes', 'Manes.05G164700' => 'mes', 'Manes.15G087000' => 'mes', 'Manes.15G121500' => 'mes', 'Manes.16G028300' => 'mes', 'Manes.17G046100' => 'mes', 'Manes.17G069800' => 'mes', 'Manes.18G100500' => 'mes', 'Mapoly0002s0109' => 'mpo', 'Mapoly0024s0007' => 'mpo', 'Mapoly0089s0032' => 'mpo', 'MBI04_g42241_MAGBIO' => 'mbi', 'MBI05_g11988_MAGBIO' => 'mbi', 'MBI05_g35452_MAGBIO' => 'mbi', 'MBI07_g30179_MAGBIO' => 'mbi', 'MBI07_g35859_MAGBIO' => 'mbi', 'MBI07_g35860_MAGBIO' => 'mbi', 'MBI07_g37166_MAGBIO' => 'mbi', 'MBI08_g18172_MAGBIO' => 'mbi', 'MBI09_g08441_MAGBIO' => 'mbi', 'MBI13_g01676_MAGBIO' => 'mbi', 'MBI14_g42955_MAGBIO' => 'mbi', 'MBI16_g13161_MAGBIO' => 'mbi', 'MBI17_g27204_MAGBIO' => 'mbi', 'MBI19_g21595_MAGBIO' => 'mbi', 'MD00G1148400' => 'mdo', 'MD02G1301200' => 'mdo', 'MD03G1227800' => 'mdo', 'MD05G1041100' => 'mdo', 'MD05G1124800' => 'mdo', 'MD05G1284000' => 'mdo', 'MD05G1338800' => 'mdo', 'MD05G1338900' => 'mdo', 'MD07G1022800' => 'mdo', 'MD10G1047500' => 'mdo', 'MD10G1127500' => 'mdo', 'MD10G1262300' => 'mdo', 'MD10G1293800' => 'mdo', 'MD16G1074300' => 'mdo', 'Medtr1g021670' => 'mtr', 'Medtr1g096320' => 'mtr', 'Medtr2g013690' => 'mtr', 'Medtr2g019450' => 'mtr', 'Medtr2g085170' => 'mtr', 'Medtr4g088785' => 'mtr', 'Medtr8g055930' => 'mtr', 'Medtr8g085850' => 'mtr', 'MELO3C002605.2' => 'cme', 'MELO3C003891.2' => 'cme', 'MELO3C004012.2' => 'cme', 'MELO3C007134.2' => 'cme', 'MELO3C008118.2' => 'cme', 'MELO3C016700.2' => 'cme', 'MELO3C024127.2' => 'cme', 'MELO3C033361.2' => 'cme', 'MELO3C033362.2' => 'cme', 'Migut.C00430' => 'egut', 'Migut.C01246' => 'egut', 'Migut.E00101' => 'egut', 'Migut.H01486' => 'egut', 'Migut.H01939' => 'egut', 'Migut.K00360' => 'egut', 'Migut.M00910' => 'egut', 'Migut.M01139' => 'egut', 'Migut.N02677' => 'egut', 'MSTRG.13252' => 'ama', 'MSTRG.14701' => 'ama', 'MSTRG.1521' => 'ama', 'MSTRG.15884' => 'ama', 'MSTRG.16242' => 'ama', 'MSTRG.22285' => 'ama', 'MSTRG.22444' => 'ama', 'MSTRG.2349' => 'ama', 'MSTRG.26308' => 'ama', 'MSTRG.28296' => 'ama', 'MSTRG.9895' => 'ama', 'Nitab4.5_0000110g0060' => 'nta', 'Nitab4.5_0000420g0130' => 'nta', 'Nitab4.5_0000422g0030' => 'nta', 'Nitab4.5_0000560g0180' => 'nta', 'Nitab4.5_0000703g0100' => 'nta', 'Nitab4.5_0000786g0200' => 'nta', 'Nitab4.5_0001336g0020' => 'nta', 'Nitab4.5_0001796g0030' => 'nta', 'Nitab4.5_0003348g0060' => 'nta', 'Nitab4.5_0003698g0040' => 'nta', 'Nitab4.5_0003942g0090' => 'nta', 'Nitab4.5_0004775g0070' => 'nta', 'Nitab4.5_0004864g0030' => 'nta', 'Nitab4.5_0005615g0020' => 'nta', 'Nitab4.5_0009288g0030' => 'nta', 'Nitab4.5_0009341g0010' => 'nta', 'Nitab4.5_0009535g0010' => 'nta', 'Nn1g03995' => 'nnu', 'Nn1g04100' => 'nnu', 'Nn1g06530' => 'nnu', 'Nn3g16404' => 'nnu', 'Nn3g17212' => 'nnu', 'Nn3g20776' => 'nnu', 'Nn3g21923' => 'nnu', 'Nn5g27737' => 'nnu', 'Nn5g29461' => 'nnu', 'Nn7g38355' => 'nnu', 'Nn8g39873' => 'nnu', 'Oeu000548.2' => 'oeu', 'Oeu004672.1' => 'oeu', 'Oeu015605.2' => 'oeu', 'Oeu016092.1' => 'oeu', 'Oeu017879.3' => 'oeu', 'Oeu024910.1' => 'oeu', 'Oeu028965.1' => 'oeu', 'Oeu031269.1' => 'oeu', 'Oeu031270.1' => 'oeu', 'Oeu032535.1' => 'oeu', 'Oeu034151.1' => 'oeu', 'Oeu034152.1' => 'oeu', 'Oeu034588.2' => 'oeu', 'Oeu050846.1' => 'oeu', 'Oeu050849.2' => 'oeu', 'Oeu051063.2' => 'oeu', 'Oeu052368.1' => 'oeu', 'Oeu052370.1' => 'oeu', 'Os01g0210400' => 'osa', 'Os01g0304300' => 'osa', 'Os01g0749100' => 'osa', 'Os02g0745800' => 'osa', 'Os03g0769050' => 'osa', 'Os05g0531500' => 'osa', 'Os06g0724300' => 'osa', 'Os11g0198100' => 'osa', 'Peaxi162Scf00069g01425' => 'pax', 'Peaxi162Scf00280g00811' => 'pax', 'Peaxi162Scf00310g00615' => 'pax', 'Peaxi162Scf00362g00542' => 'pax', 'Peaxi162Scf00461g00310' => 'pax', 'Peaxi162Scf00530g00118' => 'pax', 'Peaxi162Scf00541g00057' => 'pax', 'Peaxi162Scf00661g00017' => 'pax', 'Peaxi162Scf00926g00027' => 'pax', 'Peaxi162Scf01064g00263' => 'pax', 'Peaxi162Scf01211g00135' => 'pax', 'PGR004G2336' => 'pgr', 'PGR042G0327' => 'pgr', 'PGR042G1957' => 'pgr', 'PGR042G2003' => 'pgr', 'PGR042G3929' => 'pgr', 'PGR083G1137' => 'pgr', 'PGR083G1364' => 'pgr', 'PGSC0003DMG400003381' => 'stu', 'PGSC0003DMG400003417' => 'stu', 'PGSC0003DMG400008981' => 'stu', 'PGSC0003DMG400012417' => 'stu', 'PGSC0003DMG400012823' => 'stu', 'PGSC0003DMG400016885' => 'stu', 'PGSC0003DMG400022812' => 'stu', 'PGSC0003DMG400029726' => 'stu', 'PGSC0003DMG401009243' => 'stu', 'PGSC0003DMG401031505' => 'stu', 'PGSC0003DMG402031505' => 'stu', 'Phvul.001G017600' => 'pvu', 'Phvul.002G193500' => 'pvu', 'Phvul.002G228900' => 'pvu', 'Phvul.002G236800' => 'pvu', 'Phvul.003G049500' => 'pvu', 'Phvul.005G072000' => 'pvu', 'Phvul.006G164800' => 'pvu', 'Phvul.006G185100' => 'pvu', 'Phvul.007G090000' => 'pvu', 'Potri.001G399800' => 'ptr', 'Potri.002G149900' => 'ptr', 'Potri.004G044100' => 'ptr', 'Potri.004G177600' => 'ptr', 'Potri.009G138000' => 'ptr', 'Potri.010G094000' => 'ptr', 'Potri.011G053000' => 'ptr', 'Potri.011G119300' => 'ptr', 'Potri.013G113700' => 'ptr', 'Potri.018G107800' => 'ptr', 'Potri.019G084100' => 'ptr', 'Pp3c14_23720' => 'ppa', 'Pp3c16_6340' => 'ppa', 'Pp3c23_13420' => 'ppa', 'Pp3c24_2740' => 'ppa', 'Pp3c25_860' => 'ppa', 'Pp3c8_21750' => 'ppa', 'Prupe.1G273000' => 'ppe', 'Prupe.1G273700' => 'ppe', 'Prupe.1G274100' => 'ppe', 'Prupe.2G023300' => 'ppe', 'Prupe.4G048000' => 'ppe', 'Prupe.4G080400' => 'ppe', 'Prupe.4G181200' => 'ppe', 'Prupe.8G056900' => 'ppe', 'Prupe.8G168700' => 'ppe', 'Psat1g189080' => 'psa', 'Psat1g204760' => 'psa', 'Psat4g175560' => 'psa', 'Psat4g177720' => 'psa', 'Psat5g244240' => 'psa', 'Psat6g010720' => 'psa', 'Psat6g187200' => 'psa', 'Psat7g072040' => 'psa', 'PSO017G3501' => 'pso', 'PSO063G2148' => 'pso', 'PSO063G5608' => 'pso', 'PSO210G6392' => 'pso', 'PSO541G2319' => 'pso', 'PSO541G2836' => 'pso', 'PSO541G4012' => 'pso', 'PSO541G6253' => 'pso', 'PSO675G0580' => 'pso', 'PSO675G0856' => 'pso', 'PSO675G5635' => 'pso', 'PSO675G9157' => 'pso', 'PSO832G1660' => 'pso', 'PSO832G1969' => 'pso', 'QL02p007186' => 'qlo', 'QL02p033904' => 'qlo', 'QL03p064391' => 'qlo', 'QL05p040593' => 'qlo', 'QL05p058242' => 'qlo', 'QL08p021825' => 'qlo', 'QL11p004981' => 'qlo', 'RcHm_v2.0_Chr1g0318301' => 'rch', 'RcHm_v2.0_Chr4g0418501' => 'rch', 'RcHm_v2.0_Chr4g0439971' => 'rch', 'RcHm_v2.0_Chr5g0008541' => 'rch', 'RcHm_v2.0_Chr5g0014101' => 'rch', 'RcHm_v2.0_Chr5g0014131' => 'rch', 'RcHm_v2.0_Chr5g0033621' => 'rch', 'RcHm_v2.0_Chr6g0272041' => 'rch', 'RcHm_v2.0_Chr6g0278831' => 'rch', 'Rhsim02G0130400' => 'rsi', 'Rhsim02G0171100' => 'rsi', 'Rhsim05G0053000' => 'rsi', 'Rhsim05G0053100' => 'rsi', 'Rhsim06G0096500' => 'rsi', 'Rhsim06G0096600' => 'rsi', 'Rhsim06G0199100' => 'rsi', 'Rhsim12G0062300' => 'rsi', 'Rhsim12G0062800' => 'rsi', 'Sabra02G0118600' => 'sbr', 'Sabra04G0027300' => 'sbr', 'Sabra04G0119500' => 'sbr', 'Sabra08G0112500' => 'sbr', 'Sabra11G0036800' => 'sbr', 'Sabra11G0103800' => 'sbr', 'Sabra13G0096300' => 'sbr', 'Sabra16G0262300' => 'sbr', 'Sabra18G0091700' => 'sbr', 'Sabra19G0095400' => 'sbr', 'SalBow6G3080' => 'sbo', 'SalBow7G1157' => 'sbo', 'SalBow7G2123' => 'sbo', 'SalBow7G2285' => 'sbo', 'SalBow7G3537' => 'sbo', 'SalBow8G2947' => 'sbo', 'SalBow8G4463' => 'sbo', 'SalBow8G5466' => 'sbo', 'Sc01g0001750' => 'sci', 'Sc02g0006640' => 'sci', 'Sc02g0006670' => 'sci', 'Sc04g0008220' => 'sci', 'Sc05g0006190' => 'sci', 'Sc08g0002760' => 'sci', 'Sc17g0006170' => 'sci', 'Sc22g0002050' => 'sci', 'Sc23g0001190' => 'sci', 'Sc24g0000980' => 'sci', 'Sed0006245' => 'sed', 'Sed0007543' => 'sed', 'Sed0009411' => 'sed', 'Sed0010765' => 'sed', 'Sed0012944' => 'sed', 'Sed0014682' => 'sed', 'Sed0016174' => 'sed', 'Sed0016796' => 'sed', 'Sed0020317' => 'sed', 'Sed0021467' => 'sed', 'SEGI_01316' => 'sgi', 'SEGI_03374' => 'sgi', 'SEGI_16265' => 'sgi', 'SEGI_18569' => 'sgi', 'SEGI_20351' => 'sgi', 'SEGI_26395' => 'sgi', 'SEGI_29469' => 'sgi', 'SEGI_34771' => 'sgi', 'SEGI_36769' => 'sgi', 'SEGI_37139' => 'sgi', 'SGA_v2.0_scaffold100G29687' => 'sas', 'SGA_v2.0_scaffold118G32472' => 'sas', 'SGA_v2.0_scaffold14G07051' => 'sas', 'SGA_v2.0_scaffold183G39845' => 'sas', 'SGA_v2.0_scaffold1G00174' => 'sas', 'SGA_v2.0_scaffold22G09714' => 'sas', 'SGA_v2.0_scaffold333G48992' => 'sas', 'SGA_v2.0_scaffold46G17491' => 'sas', 'SGA_v2.0_scaffold49G18294' => 'sas', 'SGA_v2.0_scaffold63G21658' => 'sas', 'SHI01741' => 'shi', 'SHI05771' => 'shi', 'SHI18077' => 'shi', 'SHI20525' => 'shi', 'SHI20527' => 'shi', 'SHI20528' => 'shi', 'SMO172G0185' => 'smo', 'SMO198G0020' => 'smo', 'SMO351G0006' => 'smo', 'SMO356G0118' => 'smo', 'SMO358G0296' => 'smo', 'SMO367G0079' => 'smo', 'SMO367G1277' => 'smo', 'Solyc01g014220.3' => 'sly', 'Solyc01g111770.2' => 'sly', 'Solyc02g078180.3' => 'sly', 'Solyc03g006430.3' => 'sly', 'Solyc03g006456.1' => 'sly', 'Solyc03g079860.2' => 'sly', 'Solyc04g079770.3' => 'sly', 'Solyc05g007430.4' => 'sly', 'Solyc07g063150.3' => 'sly', 'Solyc08g016620.3' => 'sly', 'Solyc09g057590.3' => 'sly', 'Solyc09g057600.1' => 'sly', 'Solyc10g009050.3' => 'sly', 'Solyc11g017420.2' => 'sly', 'Sopen01g053810' => 'spe', 'Sopen02g023040' => 'spe', 'Sopen03g002440' => 'spe', 'Sopen04g033350' => 'spe', 'Sopen05g003310' => 'spe', 'Sopen07g004050' => 'spe', 'Sopen07g031340' => 'spe', 'Sopen08g006990' => 'spe', 'Sopen10g004830' => 'spe', 'Sopen11g009370' => 'spe', 'Sp1g24450' => 'spa', 'Sp1g29670' => 'spa', 'Sp1g39600' => 'spa', 'Sp2g11080' => 'spa', 'Sp2g13970' => 'spa', 'Sp4g16130' => 'spa', 'Sp6g13080' => 'spa', 'Sp7g37270' => 'spa', 'TAR371G0065' => 'tar', 'TAR376G0340' => 'tar', 'TAR376G0435' => 'tar', 'TAR381G0002' => 'tar', 'TAR381G1236' => 'tar', 'TAR624G0055' => 'tar', 'TAR624G0324' => 'tar', 'TAR624G0696' => 'tar', 'TAR624G0906' => 'tar', 'TAR625G0107' => 'tar', 'TAR626G0015' => 'tar', 'TAR626G1356' => 'tar', 'TAR627G0888' => 'tar', 'TAR628G0399' => 'tar', 'TAR628G1327' => 'tar', 'TAR629G2831' => 'tar', 'TAR629G2874' => 'tar', 'TAR633G1432' => 'tar', 'TAR633G2771' => 'tar', 'THA.LOC104803394' => 'tha', 'THA.LOC104805153' => 'tha', 'THA.LOC104806784' => 'tha', 'THA.LOC104810473' => 'tha', 'THA.LOC104813100' => 'tha', 'THA.LOC104814215' => 'tha', 'THA.LOC104815554' => 'tha', 'THA.LOC104820544' => 'tha', 'THA.LOC104824754' => 'tha', 'THA.LOC104827717' => 'tha', 'Thecc.02G031400' => 'tca', 'Thecc.02G055900' => 'tca', 'Thecc.02G350800' => 'tca', 'Thecc.06G150900' => 'tca', 'Thecc.06G186600' => 'tca', 'Thecc.07G089600' => 'tca', 'Thecc.08G020400' => 'tca', 'Thecc.08G182100' => 'tca', 'Thhalv10000873m.g' => 'esa', 'Thhalv10004185m.g' => 'esa', 'Thhalv10006981m.g' => 'esa', 'Thhalv10007204m.g' => 'esa', 'Thhalv10011374m.g' => 'esa', 'Thhalv10013482m.g' => 'esa', 'Thhalv10017801m.g' => 'esa', 'Thhalv10024983m.g' => 'esa', 'TPR.G12072' => 'tpr', 'TPR.G15769' => 'tpr', 'TPR.G16504' => 'tpr', 'TPR.G16506' => 'tpr', 'TPR.G24345' => 'tpr', 'TPR.G26666' => 'tpr', 'TPR.G27320' => 'tpr', 'TPR.G31819' => 'tpr', 'TPR.G38879' => 'tpr', 'TPR.G39015' => 'tpr', 'TPR.G8819' => 'tpr', 'TWI09G0924' => 'twi', 'TWI12G0811' => 'twi', 'TWI12G1294' => 'twi', 'TWI31G0150' => 'twi', 'TWI36G1262' => 'twi', 'TWI38G1287' => 'twi', 'TWI38G1633' => 'twi', 'TWI38G1982' => 'twi', 'TWI39G0116' => 'twi', 'TWI60G1011' => 'twi', 'TWI63G0171' => 'twi', 'TWI73G0839' => 'twi', 'TWI79G1511' => 'twi', 'unitig_0.g915' => 'ugi', 'unitig_0.g916' => 'ugi', 'unitig_21.g20219' => 'ugi', 'unitig_21.g20416' => 'ugi', 'unitig_578.g16132' => 'ugi', 'unitig_578.g16718' => 'ugi', 'unitig_62.g23481' => 'ugi', 'unitig_744.g24535' => 'ugi', 'unitig_749.g13525' => 'ugi', 'vmacro01248' => 'vma', 'vmacro02290' => 'vma', 'vmacro10946' => 'vma', 'vmacro11865' => 'vma', 'vmacro12493' => 'vma', 'vmacro17322' => 'vma', 'vmacro21599' => 'vma', 'vmacro23041' => 'vma', 'VMungo0251G0004' => 'vmu', 'VMungo0251G2639' => 'vmu', 'VMungo0251G2967' => 'vmu', 'VMungo0540G0864' => 'vmu', 'VMungo0540G1569' => 'vmu', 'VMungo0647G0317' => 'vmu', 'VMungo0720G1373' => 'vmu', 'VMungo0720G1508' => 'vmu', 'VMungo1080G0485' => 'vmu', 'VMungo1215G3177' => 'vmu', 'Zm00001eb112600' => 'zma', 'Zm00001eb120220' => 'zma', 'Zm00001eb153240' => 'zma', 'Zm00001eb168880' => 'zma', 'Zm00001eb213920' => 'zma', 'Zm00001eb228280' => 'zma', 'Zm00001eb254580' => 'zma', 'Zm00001eb272180' => 'zma', 'Zm00001eb293190' => 'zma', 'Zm00001eb322930' => 'zma', 'Zm00001eb353360' => 'zma', 'Zm00001eb353390' => 'zma', 'Zm00001eb353430' => 'zma', 'Zm00001eb353440' => 'zma', 'Zm00001eb353780' => 'zma' ) $gf_id = 'HOM05D000499' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000499' ) $data_identifier = 'HOM05D000499' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 29, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 12, 'amhyb' => (int) 8, 'aly' => (int) 12, 'aox' => (int) 9, 'arhy' => (int) 26, 'ath' => (int) 8, 'atr' => (int) 7, 'acertr' => (int) 10, 'cqu' => (int) 15, 'bca' => (int) 29, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 11, 'cansat' => (int) 8, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 9, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 8, 'cpa' => (int) 10, 'csa' => (int) 7, 'camsi' => (int) 20, 'dca' => (int) 8, 'din' => (int) 12, 'dzi' => (int) 14, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 6, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 38, 'gra' => (int) 16, 'vvi' => (int) 8, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 5, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 11, 'lja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 11, 'mpo' => (int) 3, 'mbi' => (int) 14, 'mdo' => (int) 14, 'mtr' => (int) 8, 'cme' => (int) 9, 'egut' => (int) 9, 'ama' => (int) 11, 'nta' => (int) 17, 'nnu' => (int) 11, 'oeu' => (int) 18, 'osa' => (int) 8, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 6, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 9, 'rsi' => (int) 9, 'sbr' => (int) 10, 'sbo' => (int) 8, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 10, 'sas' => (int) 10, 'shi' => (int) 6, 'smo' => (int) 7, 'sly' => (int) 14, 'spe' => (int) 10, 'spa' => (int) 8, 'tar' => (int) 19, 'tha' => (int) 10, 'tca' => (int) 8, 'esa' => (int) 8, 'tpr' => (int) 11, 'twi' => (int) 13, 'ugi' => (int) 9, 'vma' => (int) 8, 'vmu' => (int) 10, 'zma' => (int) 15 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb353780' $species_info = array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ) $local_species = 'han' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000499', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1066', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p29780' => 'bna', 'A02p33180' => 'bna', 'A03p16470' => 'bna', 'A03p66010' => 'bna', 'A04p25970' => 'bna', 'A06p01270' => 'bna', 'A06p46080' => 'bna', 'A07p11400' => 'bna', 'A08p01840' => 'bna', 'A08p08230' => 'bna', 'A08p25740' => 'bna', 'A09p32070' => 'bna', 'A09p37830' => 'bna', 'A09p42840' => 'bna', 'A09p42850' => 'bna', 'Aa31LG10G2060' => 'aar', 'Aa31LG2G7410' => 'aar', 'Aa31LG6G10200' => 'aar', 'Aa31LG6G16680' => 'aar', 'Aa31LG6G8470' => 'aar', 'Aa31LG9G12730' => 'aar', 'Aa31LG9G13680' => 'aar', 'Aa31LG9G14920' => 'aar', 'Aa31LG9G6650' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4977' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5467' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3254' => 'aag', 'Actinidia02578' => 'ach', 'Actinidia07693' => 'ach', 'Actinidia08413' => 'ach', 'Actinidia08414' => 'ach', 'Actinidia15289' => 'ach', 'Actinidia19871' => 'ach', 'Actinidia21475' => 'ach', 'Actinidia22576' => 'ach', 'Actinidia28327' => 'ach', 'Actinidia32491' => 'ach', 'Actinidia39463' => 'ach', 'Actinidia39571' => 'ach', 'Ah.01g013750' => 'amhyb', 'Ah.01g023210' => 'amhyb', 'Ah.04g164850' => 'amhyb', 'Ah.05g178060' => 'amhyb', 'Ah.07g204270' => 'amhyb', 'Ah.07g208480' => 'amhyb', 'Ah.09g237410' => 'amhyb', 'Ah.14g089460' => 'amhyb', 'AL1G41790' => 'aly', 'AL1G49050' => 'aly', 'AL1G53810' => 'aly', 'AL1G61400' => 'aly', 'AL4G18580' => 'aly', 'AL5G12510' => 'aly', 'AL5G12540' => 'aly', 'AL6G43230' => 'aly', 'AL7G10370' => 'aly', 'AL7G19250' => 'aly', 'AL8G12240' => 'aly', 'AL8G18540' => 'aly', 'Aqoxy1G02409' => 'aox', 'Aqoxy2G03993' => 'aox', 'Aqoxy3G03357' => 'aox', 'Aqoxy4G00785' => 'aox', 'Aqoxy5G02598' => 'aox', 'Aqoxy6G00132' => 'aox', 'Aqoxy7G01776' => 'aox', 'Aqoxy7G02316' => 'aox', 'Aqoxy7G03973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.12AFKW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B8730' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27IQR1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3F75VG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3RE0GA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41TCQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.527VTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FIR39' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5W8UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DA38EV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ63HS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H1I32C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HC27T5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4M8AP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7N3CZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9UVDZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LS1NQA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT1D4B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SKC4TM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCFV76' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF9Q1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQWD9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1ZM88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WE07RT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YCK7VH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJE6Q6' => 'arhy', 'AT1G28240' => 'ath', 'AT1G34550' => 'ath', 'AT1G53040' => 'ath', 'AT2G02910' => 'ath', 'AT4G09630' => 'ath', 'AT4G38500' => 'ath', 'AT5G42660' => 'ath', 'AT5G46220' => 'ath', 'ATR0152G026' => 'atr', 'ATR0564G343' => 'atr', 'ATR0706G151' => 'atr', 'ATR0733G207' => 'atr', 'ATR0751G234' => 'atr', 'ATR0807G048' => 'atr', 'ATR1091G084' => 'atr', 'Atru.chr10.1229' => 'acertr', 'Atru.chr10.1230' => 'acertr', 'Atru.chr10.1874' => 'acertr', 'Atru.chr11.1808' => 'acertr', 'Atru.chr13.1795' => 'acertr', 'Atru.chr13.570' => 'acertr', 'Atru.chr2.2608' => 'acertr', 'Atru.chr2.2609' => 'acertr', 'Atru.chr5.3428' => 'acertr', 'Atru.chr8.1171' => 'acertr', 'AUR62004651' => 'cqu', 'AUR62008675' => 'cqu', 'AUR62010014' => 'cqu', 'AUR62013004' => 'cqu', 'AUR62014825' => 'cqu', 'AUR62015015' => 'cqu', 'AUR62015151' => 'cqu', 'AUR62017020' => 'cqu', 'AUR62019422' => 'cqu', 'AUR62023570' => 'cqu', 'AUR62025571' => 'cqu', 'AUR62029098' => 'cqu', 'AUR62033863' => 'cqu', 'AUR62034296' => 'cqu', 'AUR62040075' => 'cqu', 'BcaB02g07334' => 'bca', 'BcaB02g10575' => 'bca', 'BcaB03g12119' => 'bca', 'BcaB03g12120' => 'bca', 'BcaB03g13945' => 'bca', 'BcaB04g17123' => 'bca', 'BcaB04g17867' => 'bca', 'BcaB04g19839' => 'bca', 'BcaB07g30317' => 'bca', 'BcaB07g32432' => 'bca', 'BcaB07g33362' => 'bca', 'BcaB08g36611' => 'bca', 'BcaC01g00028' => 'bca', 'BcaC01g01356' => 'bca', 'BcaC01g02034' => 'bca', 'BcaC01g06051' => 'bca', 'BcaC03g16839' => 'bca', 'BcaC03g17176' => 'bca', 'BcaC05g26829' => 'bca', 'BcaC06g31490' => 'bca', 'BcaC06g35344' => 'bca', 'BcaC06g36570' => 'bca', 'BcaC07g37537' => 'bca', 'BcaC08g43491' => 'bca', 'BcaC08g43773' => 'bca', 'BcaNung00234' => 'bca', 'BcaNung01982' => 'bca', 'BcaNung03707' => 'bca', 'BcaNung06454' => 'bca', 'BolC2t10762H' => 'bol', 'BolC2t11191H' => 'bol', 'BolC3t14322H' => 'bol', 'BolC3t19747H' => 'bol', 'BolC3t21425H' => 'bol', 'BolC4t27800H' => 'bol', 'BolC5t31423H' => 'bol', 'BolC6t35951H' => 'bol', 'BolC6t36282H' => 'bol', 'BolC7t40678H' => 'bol', 'BolC7t40679H' => 'bol', 'BolC7t42222H' => 'bol', 'BolC7t43492H' => 'bol', 'BolC7t46785H' => 'bol', 'BolC8t47853H' => 'bol', 'BolC9t56805H' => 'bol', 'BraA02t08000Z' => 'bra', 'BraA02t08341Z' => 'bra', 'BraA03t10936Z' => 'bra', 'BraA03t15657Z' => 'bra', 'BraA04t18100Z' => 'bra', 'BraA05t20523Z' => 'bra', 'BraA06t23353Z' => 'bra', 'BraA06t27473Z' => 'bra', 'BraA06t27769Z' => 'bra', 'BraA07t28928Z' => 'bra', 'BraA08t32236Z' => 'bra', 'BraA08t32841Z' => 'bra', 'BraA08t34524Z' => 'bra', 'BraA09t38742Z' => 'bra', 'BraA09t39295Z' => 'bra', 'C02p47180' => 'bna', 'C02p50990' => 'bna', 'C03p19360' => 'bna', 'C03p74950' => 'bna', 'C03p91000' => 'bna', 'C04p63260' => 'bna', 'C05p27050' => 'bna', 'C06p08750' => 'bna', 'C06p11490' => 'bna', 'C07p02820' => 'bna', 'C07p17180' => 'bna', 'C07p29440' => 'bna', 'C07p63730' => 'bna', 'C09p39260' => 'bna', 'CAN.G1164.34' => 'can', 'CAN.G1164.39' => 'can', 'CAN.G1530.3' => 'can', 'CAN.G162.61' => 'can', 'CAN.G176.6' => 'can', 'CAN.G289.49' => 'can', 'CAN.G370.21' => 'can', 'CAN.G370.22' => 'can', 'CAN.G371.117' => 'can', 'CAN.G58.37' => 'can', 'CAN.G588.98' => 'can', 'CANSAT21G2266' => 'cansat', 'CANSAT25G2799' => 'cansat', 'CANSAT35G0862' => 'cansat', 'CANSAT35G1704' => 'cansat', 'CANSAT35G1760' => 'cansat', 'CANSAT56G3971' => 'cansat', 'CANSAT56G4116' => 'cansat', 'CANSAT80G1259' => 'cansat', 'CARHR027730' => 'chi', 'CARHR033880' => 'chi', 'CARHR043270' => 'chi', 'CARHR145330' => 'chi', 'CARHR145340' => 'chi', 'CARHR175570' => 'chi', 'CARHR181570' => 'chi', 'CARHR258470' => 'chi', 'CARHR260490' => 'chi', 'CARHR294220' => 'chi', 'Carub.0001s2668' => 'cru', 'Carub.0001s3257' => 'cru', 'Carub.0001s4220' => 'cru', 'Carub.0005s0179' => 'cru', 'Carub.0006s2807' => 'cru', 'Carub.0007s0039' => 'cru', 'Carub.0008s0169' => 'cru', 'Carub.0008s0636' => 'cru', 'Ca_00338_v3' => 'car', 'Ca_00542_v3' => 'car', 'Ca_01844_v3' => 'car', 'Ca_10611_v3' => 'car', 'Ca_13326_v3' => 'car', 'Ca_17944_v3' => 'car', 'Ca_18546_v3' => 'car', 'Ca_24219_v3' => 'car', 'Ca_29972_v3' => 'car', 'CBR_g3681' => 'cbr', 'CBR_g40021' => 'cbr', 'Cc01_g08140' => 'ccan', 'Cc02_g13410' => 'ccan', 'Cc02_g37480' => 'ccan', 'Cc05_g12030' => 'ccan', 'Cc09_g03370' => 'ccan', 'Cc09_g10300' => 'ccan', 'Cc10_g03530' => 'ccan', 'Cc10_g11380' => 'ccan', 'CDE01G0176' => 'cde', 'CDE02G0675' => 'cde', 'CDE02G0942' => 'cde', 'CDE02G1153' => 'cde', 'CDE02G4177' => 'cde', 'CDE04G2117' => 'cde', 'CDE04G2736' => 'cde', 'CDE08G1161' => 'cde', 'CDE09G1238' => 'cde', 'Cfa000467' => 'cfa', 'Cfa000947' => 'cfa', 'Cfa004969' => 'cfa', 'Cfa005284' => 'cfa', 'Cfa008993' => 'cfa', 'Cfa018187' => 'cfa', 'Cfa018454' => 'cfa', 'Cfa020585' => 'cfa', 'Ciclev10000424m.g' => 'ccl', 'Ciclev10003605m.g' => 'ccl', 'Ciclev10007828m.g' => 'ccl', 'Ciclev10014620m.g' => 'ccl', 'Ciclev10015169m.g' => 'ccl', 'Ciclev10018291m.g' => 'ccl', 'Ciclev10028256m.g' => 'ccl', 'Ciclev10033822m.g' => 'ccl', 'CiPaw.05G060300' => 'cil', 'CiPaw.05G085000' => 'cil', 'CiPaw.06G083700' => 'cil', 'CiPaw.06G120300' => 'cil', 'CiPaw.09G060500' => 'cil', 'CiPaw.09G123800' => 'cil', 'CiPaw.11G169700' => 'cil', 'CiPaw.12G118300' => 'cil', 'CiPaw.15G071000' => 'cil', 'CiPaw.15G081900' => 'cil', 'ClCG01G024610' => 'cla', 'ClCG03G006070' => 'cla', 'ClCG05G019250' => 'cla', 'ClCG09G009500' => 'cla', 'ClCG11G008200' => 'cla', 'ClCG11G018080' => 'cla', 'COL.COLO4_17373' => 'col', 'COL.COLO4_22994' => 'col', 'COL.COLO4_26389' => 'col', 'COL.COLO4_27170' => 'col', 'COL.COLO4_31074' => 'col', 'COL.COLO4_31465' => 'col', 'COL.COLO4_36438' => 'col', 'COL.COLO4_36439' => 'col', 'Cpa.g.c38781' => 'cpa', 'Cpa.g.sc128.12' => 'cpa', 'Cpa.g.sc166.7' => 'cpa', 'Cpa.g.sc166.8' => 'cpa', 'Cpa.g.sc20.111' => 'cpa', 'Cpa.g.sc27.31' => 'cpa', 'Cpa.g.sc64.36' => 'cpa', 'Cpa.g.sc64.37' => 'cpa', 'Cpa.g.sc66.49' => 'cpa', 'Cpa.g.sc80.64' => 'cpa', 'CsaV3_1G012320' => 'csa', 'CsaV3_2G008480' => 'csa', 'CsaV3_2G033450' => 'csa', 'CsaV3_3G044830' => 'csa', 'CsaV3_4G033710' => 'csa', 'CsaV3_6G051730' => 'csa', 'CsaV3_7G025350' => 'csa', 'CSS0001067' => 'camsi', 'CSS0005996' => 'camsi', 'CSS0006590' => 'camsi', 'CSS0009673' => 'camsi', 'CSS0010201' => 'camsi', 'CSS0010549' => 'camsi', 'CSS0011364' => 'camsi', 'CSS0014473' => 'camsi', 'CSS0014961' => 'camsi', 'CSS0020191' => 'camsi', 'CSS0021165' => 'camsi', 'CSS0022306' => 'camsi', 'CSS0030591' => 'camsi', 'CSS0030696' => 'camsi', 'CSS0032653' => 'camsi', 'CSS0037487' => 'camsi', 'CSS0041102' => 'camsi', 'CSS0041261' => 'camsi', 'CSS0046246' => 'camsi', 'CSS0049256' => 'camsi', 'DCAR_004075' => 'dca', 'DCAR_011538' => 'dca', 'DCAR_019553' => 'dca', 'DCAR_020952' => 'dca', 'DCAR_021739' => 'dca', 'DCAR_027407' => 'dca', 'DCAR_027913' => 'dca', 'DCAR_028066' => 'dca', 'Dinv05899' => 'din', 'Dinv07563' => 'din', 'Dinv08010' => 'din', 'Dinv14125' => 'din', 'Dinv20172' => 'din', 'Dinv30743' => 'din', 'Dinv31229' => 'din', 'Dinv34162' => 'din', 'Dinv36028' => 'din', 'Dinv39368' => 'din', 'Dinv40565' => 'din', 'Dinv41706' => 'din', 'Duzib052G0089' => 'dzi', 'Duzib116G0641' => 'dzi', 'Duzib132G0069' => 'dzi', 'Duzib132G1219' => 'dzi', 'Duzib147G0278' => 'dzi', 'Duzib160G0480' => 'dzi', 'Duzib170G0661' => 'dzi', 'Duzib177G0591' => 'dzi', 'Duzib187G1353' => 'dzi', 'Duzib192G0858' => 'dzi', 'Duzib192G0883' => 'dzi', 'Duzib213G0506' => 'dzi', 'Duzib235G0289' => 'dzi', 'Duzib251G0422' => 'dzi', 'ECA232G3898' => 'eca', 'ECA233G5950' => 'eca', 'ECA234G1699' => 'eca', 'ECA234G2421' => 'eca', 'ECA236G0426' => 'eca', 'ECA236G4331' => 'eca', 'ECA248G2573' => 'eca', 'EL10Ac1g00077' => 'bvu', 'EL10Ac1g01746' => 'bvu', 'EL10Ac2g03464' => 'bvu', 'EL10Ac4g08176' => 'bvu', 'EL10Ac7g17521' => 'bvu', 'EL10Ac8g20386' => 'bvu', 'EL10Ac9g21343' => 'bvu', 'EL10Ac9g22688' => 'bvu', 'Eucgr.B03434' => 'egr', 'Eucgr.D00618' => 'egr', 'Eucgr.E02395' => 'egr', 'Eucgr.F01129' => 'egr', 'Eucgr.F02622' => 'egr', 'Eucgr.F04207' => 'egr', 'FAN01G0570' => 'fan', 'FAN03G3351' => 'fan', 'FAN06G3702' => 'fan', 'FAN07G2149' => 'fan', 'FAN10G3758' => 'fan', 'FAN11G1170' => 'fan', 'FAN11G2050' => 'fan', 'FAN11G2724' => 'fan', 'FAN12G1700' => 'fan', 'FAN12G2028' => 'fan', 'FAN15G1160' => 'fan', 'FAN15G3063' => 'fan', 'FAN16G2540' => 'fan', 'FAN16G3077' => 'fan', 'FAN16G3624' => 'fan', 'FAN17G0221' => 'fan', 'FAN20G2492' => 'fan', 'FAN20G2905' => 'fan', 'FAN21G0548' => 'fan', 'FAN21G1300' => 'fan', 'FAN22G0077' => 'fan', 'FAN22G1315' => 'fan', 'FAN24G1280' => 'fan', 'FAN24G1445' => 'fan', 'FAN24G3527' => 'fan', 'FAN25G0464' => 'fan', 'FAN25G2885' => 'fan', 'FAN25G3270' => 'fan', 'FAN27G1101' => 'fan', 'FAN27G2846' => 'fan', 'FAN27G3524' => 'fan', 'FvH4_2g11770' => 'fve', 'FvH4_2g15630' => 'fve', 'FvH4_3g05570' => 'fve', 'FvH4_3g09110' => 'fve', 'FvH4_3g19940' => 'fve', 'FvH4_4g04821' => 'fve', 'FvH4_4g31480' => 'fve', 'FvH4_7g01740' => 'fve', 'Glyma.05G130400' => 'gma', 'Glyma.05G156400' => 'gma', 'Glyma.07G197000' => 'gma', 'Glyma.08G085151' => 'gma', 'Glyma.08G114500' => 'gma', 'Glyma.08G300400' => 'gma', 'Glyma.10G215800' => 'gma', 'Glyma.12G224400' => 'gma', 'Glyma.13G179300' => 'gma', 'Glyma.13G218151' => 'gma', 'Glyma.13G238800' => 'gma', 'Glyma.13G276900' => 'gma', 'Glyma.14G078200' => 'gma', 'Glyma.15G074500' => 'gma', 'Glyma.15G094100' => 'gma', 'Glyma.17G247200' => 'gma', 'Glyma.18G120100' => 'gma', 'Glyma.20G176000' => 'gma', 'Gohir.A01G063600' => 'ghi', 'Gohir.A01G170301' => 'ghi', 'Gohir.A02G060500' => 'ghi', 'Gohir.A05G133850' => 'ghi', 'Gohir.A05G161400' => 'ghi', 'Gohir.A06G012900' => 'ghi', 'Gohir.A06G035901' => 'ghi', 'Gohir.A06G127100' => 'ghi', 'Gohir.A06G210500' => 'ghi', 'Gohir.A08G008650' => 'ghi', 'Gohir.A09G072700' => 'ghi', 'Gohir.A09G088301' => 'ghi', 'Gohir.A10G040600' => 'ghi', 'Gohir.A12G036300' => 'ghi', 'Gohir.A12G143350' => 'ghi', 'Gohir.A12G165500' => 'ghi', 'Gohir.A13G145700' => 'ghi', 'Gohir.D01G050000' => 'ghi', 'Gohir.D01G051366' => 'ghi', 'Gohir.D01G161350' => 'ghi', 'Gohir.D02G065900' => 'ghi', 'Gohir.D05G164200' => 'ghi', 'Gohir.D05G355500' => 'ghi', 'Gohir.D06G010400' => 'ghi', 'Gohir.D06G111250' => 'ghi', 'Gohir.D06G132000' => 'ghi', 'Gohir.D06G210500' => 'ghi', 'Gohir.D07G165675' => 'ghi', 'Gohir.D08G062240' => 'ghi', 'Gohir.D08G086101' => 'ghi', 'Gohir.D08G138060' => 'ghi', 'Gohir.D09G072300' => 'ghi', 'Gohir.D10G041400' => 'ghi', 'Gohir.D11G191020' => 'ghi', 'Gohir.D11G212066' => 'ghi', 'Gohir.D12G036300' => 'ghi', 'Gohir.D12G168600' => 'ghi', 'Gohir.D13G150600' => 'ghi', 'Gorai.001G057300' => 'gra', 'Gorai.002G069900' => 'gra', 'Gorai.002G200000' => 'gra', 'Gorai.003G067600' => 'gra', 'Gorai.005G074800' => 'gra', 'Gorai.006G087300' => 'gra', 'Gorai.008G037500' => 'gra', 'Gorai.008G181400' => 'gra', 'Gorai.009G169400' => 'gra', 'Gorai.009G387900' => 'gra', 'Gorai.010G013300' => 'gra', 'Gorai.010G153800' => 'gra', 'Gorai.010G255800' => 'gra', 'Gorai.011G043700' => 'gra', 'Gorai.011G198900' => 'gra', 'Gorai.013G168400' => 'gra', 'GSVIVG01005212001' => 'vvi', 'GSVIVG01006163001' => 'vvi', 'GSVIVG01009625001' => 'vvi', 'GSVIVG01014338001' => 'vvi', 'GSVIVG01020005001' => 'vvi', 'GSVIVG01021450001' => 'vvi', 'GSVIVG01023975001' => 'vvi', 'GSVIVG01034490001' => 'vvi', 'HanXRQChr04g0112071' => 'han', 'HanXRQChr05g0131151' => 'han', 'HanXRQChr09g0262371' => 'han', 'HanXRQChr09g0268401' => 'han', 'HanXRQChr10g0279241' => 'han', 'HanXRQChr10g0297961' => 'han', 'HanXRQChr11g0326231' => 'han', 'HanXRQChr11g0328471' => 'han', 'HanXRQChr16g0507941' => 'han', 'HanXRQChr17g0560211' => 'han', 'Haze_02108' => 'cav', 'Haze_02428' => 'cav', 'Haze_05593' => 'cav', 'Haze_06448' => 'cav', 'Haze_09427' => 'cav', 'Haze_12022' => 'cav', 'Haze_17612' => 'cav', 'Haze_17928' => 'cav', 'Hma1.2p1_0032F.1_g019250' => 'hma', 'Hma1.2p1_0163F.1_g072690' => 'hma', 'Hma1.2p1_0265F.1_g106710' => 'hma', 'Hma1.2p1_0286F.1_g113970' => 'hma', 'Hma1.2p1_0363F.1_g136640' => 'hma', 'Hma1.2p1_0584F.1_g183470' => 'hma', 'Hma1.2p1_0885F.1_g232570' => 'hma', 'HPP92_006022' => 'vpl', 'HPP92_007320' => 'vpl', 'HPP92_011521' => 'vpl', 'HPP92_019387' => 'vpl', 'HPP92_024038' => 'vpl', 'Hund05891' => 'sun', 'Hund06450' => 'sun', 'Hund12053' => 'sun', 'Hund16800' => 'sun', 'Hund21222' => 'sun', 'Hund22896' => 'sun', 'Hund23746' => 'sun', 'Hund27083' => 'sun', 'Lalb_Chr02g0141831' => 'lal', 'Lalb_Chr02g0141841' => 'lal', 'Lalb_Chr05g0220411' => 'lal', 'Lalb_Chr06g0162081' => 'lal', 'Lalb_Chr09g0327651' => 'lal', 'Lalb_Chr13g0295051' => 'lal', 'Lalb_Chr15g0086801' => 'lal', 'Lalb_Chr16g0383781' => 'lal', 'Lalb_Chr16g0383791' => 'lal', 'Lalb_Chr18g0055441' => 'lal', 'Lalb_Chr18g0059611' => 'lal', 'Lalb_Chr20g0109661' => 'lal', 'Lalb_Chr20g0109831' => 'lal', 'Lalb_Chr20g0121871' => 'lal', 'Lalb_Chr22g0355361' => 'lal', 'Lalb_Chr25g0286371' => 'lal', 'Lj1A1187G43' => 'lonja', 'Lj1A1205T50' => 'lonja', 'Lj1A800G33' => 'lonja', 'Lj1C1187T7' => 'lonja', 'Lj1C843T11' => 'lonja', 'Lj1g0010940' => 'lja', 'Lj2A288T69' => 'lonja', 'Lj3g0024276' => 'lja', 'Lj4A47T76' => 'lonja', 'Lj4g0005805' => 'lja', 'Lj4g0006097' => 'lja', 'Lj4g0008528' => 'lja', 'Lj4g0024907' => 'lja', 'Lj5g0012472' => 'lja', 'Lj5g0018648' => 'lja', 'Lj6C789G1' => 'lonja', 'Lj6g0004000' => 'lja', 'Lj7A292G67' => 'lonja', 'Lj7A292T64' => 'lonja', 'Lj9A400T58' => 'lonja', 'Lsat_1_v5_gn_1_126181' => 'lsa', 'Lsat_1_v5_gn_4_123041' => 'lsa', 'Lsat_1_v5_gn_4_133620' => 'lsa', 'Lsat_1_v5_gn_4_53221' => 'lsa', 'Lsat_1_v5_gn_4_71961' => 'lsa', 'Lsat_1_v5_gn_7_105241' => 'lsa', 'Lsat_1_v5_gn_7_21361' => 'lsa', 'Lsat_1_v5_gn_7_28860' => 'lsa', 'Lsat_1_v5_gn_7_31260' => 'lsa', 'Lsat_1_v5_gn_8_52801' => 'lsa', 'Manes.02G191400' => 'mes', 'Manes.03G110100' => 'mes', 'Manes.04G071100' => 'mes', 'Manes.05G100500' => 'mes', 'Manes.05G164700' => 'mes', 'Manes.15G087000' => 'mes', 'Manes.15G121500' => 'mes', 'Manes.16G028300' => 'mes', 'Manes.17G046100' => 'mes', 'Manes.17G069800' => 'mes', 'Manes.18G100500' => 'mes', 'Mapoly0002s0109' => 'mpo', 'Mapoly0024s0007' => 'mpo', 'Mapoly0089s0032' => 'mpo', 'MBI04_g42241_MAGBIO' => 'mbi', 'MBI05_g11988_MAGBIO' => 'mbi', 'MBI05_g35452_MAGBIO' => 'mbi', 'MBI07_g30179_MAGBIO' => 'mbi', 'MBI07_g35859_MAGBIO' => 'mbi', 'MBI07_g35860_MAGBIO' => 'mbi', 'MBI07_g37166_MAGBIO' => 'mbi', 'MBI08_g18172_MAGBIO' => 'mbi', 'MBI09_g08441_MAGBIO' => 'mbi', 'MBI13_g01676_MAGBIO' => 'mbi', 'MBI14_g42955_MAGBIO' => 'mbi', 'MBI16_g13161_MAGBIO' => 'mbi', 'MBI17_g27204_MAGBIO' => 'mbi', 'MBI19_g21595_MAGBIO' => 'mbi', 'MD00G1148400' => 'mdo', 'MD02G1301200' => 'mdo', 'MD03G1227800' => 'mdo', 'MD05G1041100' => 'mdo', 'MD05G1124800' => 'mdo', 'MD05G1284000' => 'mdo', 'MD05G1338800' => 'mdo', 'MD05G1338900' => 'mdo', 'MD07G1022800' => 'mdo', 'MD10G1047500' => 'mdo', 'MD10G1127500' => 'mdo', 'MD10G1262300' => 'mdo', 'MD10G1293800' => 'mdo', 'MD16G1074300' => 'mdo', 'Medtr1g021670' => 'mtr', 'Medtr1g096320' => 'mtr', 'Medtr2g013690' => 'mtr', 'Medtr2g019450' => 'mtr', 'Medtr2g085170' => 'mtr', 'Medtr4g088785' => 'mtr', 'Medtr8g055930' => 'mtr', 'Medtr8g085850' => 'mtr', 'MELO3C002605.2' => 'cme', 'MELO3C003891.2' => 'cme', 'MELO3C004012.2' => 'cme', 'MELO3C007134.2' => 'cme', 'MELO3C008118.2' => 'cme', 'MELO3C016700.2' => 'cme', 'MELO3C024127.2' => 'cme', 'MELO3C033361.2' => 'cme', 'MELO3C033362.2' => 'cme', 'Migut.C00430' => 'egut', 'Migut.C01246' => 'egut', 'Migut.E00101' => 'egut', 'Migut.H01486' => 'egut', 'Migut.H01939' => 'egut', 'Migut.K00360' => 'egut', 'Migut.M00910' => 'egut', 'Migut.M01139' => 'egut', 'Migut.N02677' => 'egut', 'MSTRG.13252' => 'ama', 'MSTRG.14701' => 'ama', 'MSTRG.1521' => 'ama', 'MSTRG.15884' => 'ama', 'MSTRG.16242' => 'ama', 'MSTRG.22285' => 'ama', 'MSTRG.22444' => 'ama', 'MSTRG.2349' => 'ama', 'MSTRG.26308' => 'ama', 'MSTRG.28296' => 'ama', 'MSTRG.9895' => 'ama', 'Nitab4.5_0000110g0060' => 'nta', 'Nitab4.5_0000420g0130' => 'nta', 'Nitab4.5_0000422g0030' => 'nta', 'Nitab4.5_0000560g0180' => 'nta', 'Nitab4.5_0000703g0100' => 'nta', 'Nitab4.5_0000786g0200' => 'nta', 'Nitab4.5_0001336g0020' => 'nta', 'Nitab4.5_0001796g0030' => 'nta', 'Nitab4.5_0003348g0060' => 'nta', 'Nitab4.5_0003698g0040' => 'nta', 'Nitab4.5_0003942g0090' => 'nta', 'Nitab4.5_0004775g0070' => 'nta', 'Nitab4.5_0004864g0030' => 'nta', 'Nitab4.5_0005615g0020' => 'nta', 'Nitab4.5_0009288g0030' => 'nta', 'Nitab4.5_0009341g0010' => 'nta', 'Nitab4.5_0009535g0010' => 'nta', 'Nn1g03995' => 'nnu', 'Nn1g04100' => 'nnu', 'Nn1g06530' => 'nnu', 'Nn3g16404' => 'nnu', 'Nn3g17212' => 'nnu', 'Nn3g20776' => 'nnu', 'Nn3g21923' => 'nnu', 'Nn5g27737' => 'nnu', 'Nn5g29461' => 'nnu', 'Nn7g38355' => 'nnu', 'Nn8g39873' => 'nnu', 'Oeu000548.2' => 'oeu', 'Oeu004672.1' => 'oeu', 'Oeu015605.2' => 'oeu', 'Oeu016092.1' => 'oeu', 'Oeu017879.3' => 'oeu', 'Oeu024910.1' => 'oeu', 'Oeu028965.1' => 'oeu', 'Oeu031269.1' => 'oeu', 'Oeu031270.1' => 'oeu', 'Oeu032535.1' => 'oeu', 'Oeu034151.1' => 'oeu', 'Oeu034152.1' => 'oeu', 'Oeu034588.2' => 'oeu', 'Oeu050846.1' => 'oeu', 'Oeu050849.2' => 'oeu', 'Oeu051063.2' => 'oeu', 'Oeu052368.1' => 'oeu', 'Oeu052370.1' => 'oeu', 'Os01g0210400' => 'osa', 'Os01g0304300' => 'osa', 'Os01g0749100' => 'osa', 'Os02g0745800' => 'osa', 'Os03g0769050' => 'osa', 'Os05g0531500' => 'osa', 'Os06g0724300' => 'osa', 'Os11g0198100' => 'osa', 'Peaxi162Scf00069g01425' => 'pax', 'Peaxi162Scf00280g00811' => 'pax', 'Peaxi162Scf00310g00615' => 'pax', 'Peaxi162Scf00362g00542' => 'pax', 'Peaxi162Scf00461g00310' => 'pax', 'Peaxi162Scf00530g00118' => 'pax', 'Peaxi162Scf00541g00057' => 'pax', 'Peaxi162Scf00661g00017' => 'pax', 'Peaxi162Scf00926g00027' => 'pax', 'Peaxi162Scf01064g00263' => 'pax', 'Peaxi162Scf01211g00135' => 'pax', 'PGR004G2336' => 'pgr', 'PGR042G0327' => 'pgr', 'PGR042G1957' => 'pgr', 'PGR042G2003' => 'pgr', 'PGR042G3929' => 'pgr', 'PGR083G1137' => 'pgr', 'PGR083G1364' => 'pgr', 'PGSC0003DMG400003381' => 'stu', 'PGSC0003DMG400003417' => 'stu', 'PGSC0003DMG400008981' => 'stu', 'PGSC0003DMG400012417' => 'stu', 'PGSC0003DMG400012823' => 'stu', 'PGSC0003DMG400016885' => 'stu', 'PGSC0003DMG400022812' => 'stu', 'PGSC0003DMG400029726' => 'stu', 'PGSC0003DMG401009243' => 'stu', 'PGSC0003DMG401031505' => 'stu', 'PGSC0003DMG402031505' => 'stu', 'Phvul.001G017600' => 'pvu', 'Phvul.002G193500' => 'pvu', 'Phvul.002G228900' => 'pvu', 'Phvul.002G236800' => 'pvu', 'Phvul.003G049500' => 'pvu', 'Phvul.005G072000' => 'pvu', 'Phvul.006G164800' => 'pvu', 'Phvul.006G185100' => 'pvu', 'Phvul.007G090000' => 'pvu', 'Potri.001G399800' => 'ptr', 'Potri.002G149900' => 'ptr', 'Potri.004G044100' => 'ptr', 'Potri.004G177600' => 'ptr', 'Potri.009G138000' => 'ptr', 'Potri.010G094000' => 'ptr', 'Potri.011G053000' => 'ptr', 'Potri.011G119300' => 'ptr', 'Potri.013G113700' => 'ptr', 'Potri.018G107800' => 'ptr', 'Potri.019G084100' => 'ptr', 'Pp3c14_23720' => 'ppa', 'Pp3c16_6340' => 'ppa', 'Pp3c23_13420' => 'ppa', 'Pp3c24_2740' => 'ppa', 'Pp3c25_860' => 'ppa', 'Pp3c8_21750' => 'ppa', 'Prupe.1G273000' => 'ppe', 'Prupe.1G273700' => 'ppe', 'Prupe.1G274100' => 'ppe', 'Prupe.2G023300' => 'ppe', 'Prupe.4G048000' => 'ppe', 'Prupe.4G080400' => 'ppe', 'Prupe.4G181200' => 'ppe', 'Prupe.8G056900' => 'ppe', 'Prupe.8G168700' => 'ppe', 'Psat1g189080' => 'psa', 'Psat1g204760' => 'psa', 'Psat4g175560' => 'psa', 'Psat4g177720' => 'psa', 'Psat5g244240' => 'psa', 'Psat6g010720' => 'psa', 'Psat6g187200' => 'psa', 'Psat7g072040' => 'psa', 'PSO017G3501' => 'pso', 'PSO063G2148' => 'pso', 'PSO063G5608' => 'pso', 'PSO210G6392' => 'pso', 'PSO541G2319' => 'pso', 'PSO541G2836' => 'pso', 'PSO541G4012' => 'pso', 'PSO541G6253' => 'pso', 'PSO675G0580' => 'pso', 'PSO675G0856' => 'pso', 'PSO675G5635' => 'pso', 'PSO675G9157' => 'pso', 'PSO832G1660' => 'pso', 'PSO832G1969' => 'pso', 'QL02p007186' => 'qlo', 'QL02p033904' => 'qlo', 'QL03p064391' => 'qlo', 'QL05p040593' => 'qlo', 'QL05p058242' => 'qlo', 'QL08p021825' => 'qlo', 'QL11p004981' => 'qlo', 'RcHm_v2.0_Chr1g0318301' => 'rch', 'RcHm_v2.0_Chr4g0418501' => 'rch', 'RcHm_v2.0_Chr4g0439971' => 'rch', 'RcHm_v2.0_Chr5g0008541' => 'rch', 'RcHm_v2.0_Chr5g0014101' => 'rch', 'RcHm_v2.0_Chr5g0014131' => 'rch', 'RcHm_v2.0_Chr5g0033621' => 'rch', 'RcHm_v2.0_Chr6g0272041' => 'rch', 'RcHm_v2.0_Chr6g0278831' => 'rch', 'Rhsim02G0130400' => 'rsi', 'Rhsim02G0171100' => 'rsi', 'Rhsim05G0053000' => 'rsi', 'Rhsim05G0053100' => 'rsi', 'Rhsim06G0096500' => 'rsi', 'Rhsim06G0096600' => 'rsi', 'Rhsim06G0199100' => 'rsi', 'Rhsim12G0062300' => 'rsi', 'Rhsim12G0062800' => 'rsi', 'Sabra02G0118600' => 'sbr', 'Sabra04G0027300' => 'sbr', 'Sabra04G0119500' => 'sbr', 'Sabra08G0112500' => 'sbr', 'Sabra11G0036800' => 'sbr', 'Sabra11G0103800' => 'sbr', 'Sabra13G0096300' => 'sbr', 'Sabra16G0262300' => 'sbr', 'Sabra18G0091700' => 'sbr', 'Sabra19G0095400' => 'sbr', 'SalBow6G3080' => 'sbo', 'SalBow7G1157' => 'sbo', 'SalBow7G2123' => 'sbo', 'SalBow7G2285' => 'sbo', 'SalBow7G3537' => 'sbo', 'SalBow8G2947' => 'sbo', 'SalBow8G4463' => 'sbo', 'SalBow8G5466' => 'sbo', 'Sc01g0001750' => 'sci', 'Sc02g0006640' => 'sci', 'Sc02g0006670' => 'sci', 'Sc04g0008220' => 'sci', 'Sc05g0006190' => 'sci', 'Sc08g0002760' => 'sci', 'Sc17g0006170' => 'sci', 'Sc22g0002050' => 'sci', 'Sc23g0001190' => 'sci', 'Sc24g0000980' => 'sci', 'Sed0006245' => 'sed', 'Sed0007543' => 'sed', 'Sed0009411' => 'sed', 'Sed0010765' => 'sed', 'Sed0012944' => 'sed', 'Sed0014682' => 'sed', 'Sed0016174' => 'sed', 'Sed0016796' => 'sed', 'Sed0020317' => 'sed', 'Sed0021467' => 'sed', 'SEGI_01316' => 'sgi', 'SEGI_03374' => 'sgi', 'SEGI_16265' => 'sgi', 'SEGI_18569' => 'sgi', 'SEGI_20351' => 'sgi', 'SEGI_26395' => 'sgi', 'SEGI_29469' => 'sgi', 'SEGI_34771' => 'sgi', 'SEGI_36769' => 'sgi', 'SEGI_37139' => 'sgi', 'SGA_v2.0_scaffold100G29687' => 'sas', 'SGA_v2.0_scaffold118G32472' => 'sas', 'SGA_v2.0_scaffold14G07051' => 'sas', 'SGA_v2.0_scaffold183G39845' => 'sas', 'SGA_v2.0_scaffold1G00174' => 'sas', 'SGA_v2.0_scaffold22G09714' => 'sas', 'SGA_v2.0_scaffold333G48992' => 'sas', 'SGA_v2.0_scaffold46G17491' => 'sas', 'SGA_v2.0_scaffold49G18294' => 'sas', 'SGA_v2.0_scaffold63G21658' => 'sas', 'SHI01741' => 'shi', 'SHI05771' => 'shi', 'SHI18077' => 'shi', 'SHI20525' => 'shi', 'SHI20527' => 'shi', 'SHI20528' => 'shi', 'SMO172G0185' => 'smo', 'SMO198G0020' => 'smo', 'SMO351G0006' => 'smo', 'SMO356G0118' => 'smo', 'SMO358G0296' => 'smo', 'SMO367G0079' => 'smo', 'SMO367G1277' => 'smo', 'Solyc01g014220.3' => 'sly', 'Solyc01g111770.2' => 'sly', 'Solyc02g078180.3' => 'sly', 'Solyc03g006430.3' => 'sly', 'Solyc03g006456.1' => 'sly', 'Solyc03g079860.2' => 'sly', 'Solyc04g079770.3' => 'sly', 'Solyc05g007430.4' => 'sly', 'Solyc07g063150.3' => 'sly', 'Solyc08g016620.3' => 'sly', 'Solyc09g057590.3' => 'sly', 'Solyc09g057600.1' => 'sly', 'Solyc10g009050.3' => 'sly', 'Solyc11g017420.2' => 'sly', 'Sopen01g053810' => 'spe', 'Sopen02g023040' => 'spe', 'Sopen03g002440' => 'spe', 'Sopen04g033350' => 'spe', 'Sopen05g003310' => 'spe', 'Sopen07g004050' => 'spe', 'Sopen07g031340' => 'spe', 'Sopen08g006990' => 'spe', 'Sopen10g004830' => 'spe', 'Sopen11g009370' => 'spe', 'Sp1g24450' => 'spa', 'Sp1g29670' => 'spa', 'Sp1g39600' => 'spa', 'Sp2g11080' => 'spa', 'Sp2g13970' => 'spa', 'Sp4g16130' => 'spa', 'Sp6g13080' => 'spa', 'Sp7g37270' => 'spa', 'TAR371G0065' => 'tar', 'TAR376G0340' => 'tar', 'TAR376G0435' => 'tar', 'TAR381G0002' => 'tar', 'TAR381G1236' => 'tar', 'TAR624G0055' => 'tar', 'TAR624G0324' => 'tar', 'TAR624G0696' => 'tar', 'TAR624G0906' => 'tar', 'TAR625G0107' => 'tar', 'TAR626G0015' => 'tar', 'TAR626G1356' => 'tar', 'TAR627G0888' => 'tar', 'TAR628G0399' => 'tar', 'TAR628G1327' => 'tar', 'TAR629G2831' => 'tar', 'TAR629G2874' => 'tar', 'TAR633G1432' => 'tar', 'TAR633G2771' => 'tar', 'THA.LOC104803394' => 'tha', 'THA.LOC104805153' => 'tha', 'THA.LOC104806784' => 'tha', 'THA.LOC104810473' => 'tha', 'THA.LOC104813100' => 'tha', 'THA.LOC104814215' => 'tha', 'THA.LOC104815554' => 'tha', 'THA.LOC104820544' => 'tha', 'THA.LOC104824754' => 'tha', 'THA.LOC104827717' => 'tha', 'Thecc.02G031400' => 'tca', 'Thecc.02G055900' => 'tca', 'Thecc.02G350800' => 'tca', 'Thecc.06G150900' => 'tca', 'Thecc.06G186600' => 'tca', 'Thecc.07G089600' => 'tca', 'Thecc.08G020400' => 'tca', 'Thecc.08G182100' => 'tca', 'Thhalv10000873m.g' => 'esa', 'Thhalv10004185m.g' => 'esa', 'Thhalv10006981m.g' => 'esa', 'Thhalv10007204m.g' => 'esa', 'Thhalv10011374m.g' => 'esa', 'Thhalv10013482m.g' => 'esa', 'Thhalv10017801m.g' => 'esa', 'Thhalv10024983m.g' => 'esa', 'TPR.G12072' => 'tpr', 'TPR.G15769' => 'tpr', 'TPR.G16504' => 'tpr', 'TPR.G16506' => 'tpr', 'TPR.G24345' => 'tpr', 'TPR.G26666' => 'tpr', 'TPR.G27320' => 'tpr', 'TPR.G31819' => 'tpr', 'TPR.G38879' => 'tpr', 'TPR.G39015' => 'tpr', 'TPR.G8819' => 'tpr', 'TWI09G0924' => 'twi', 'TWI12G0811' => 'twi', 'TWI12G1294' => 'twi', 'TWI31G0150' => 'twi', 'TWI36G1262' => 'twi', 'TWI38G1287' => 'twi', 'TWI38G1633' => 'twi', 'TWI38G1982' => 'twi', 'TWI39G0116' => 'twi', 'TWI60G1011' => 'twi', 'TWI63G0171' => 'twi', 'TWI73G0839' => 'twi', 'TWI79G1511' => 'twi', 'unitig_0.g915' => 'ugi', 'unitig_0.g916' => 'ugi', 'unitig_21.g20219' => 'ugi', 'unitig_21.g20416' => 'ugi', 'unitig_578.g16132' => 'ugi', 'unitig_578.g16718' => 'ugi', 'unitig_62.g23481' => 'ugi', 'unitig_744.g24535' => 'ugi', 'unitig_749.g13525' => 'ugi', 'vmacro01248' => 'vma', 'vmacro02290' => 'vma', 'vmacro10946' => 'vma', 'vmacro11865' => 'vma', 'vmacro12493' => 'vma', 'vmacro17322' => 'vma', 'vmacro21599' => 'vma', 'vmacro23041' => 'vma', 'VMungo0251G0004' => 'vmu', 'VMungo0251G2639' => 'vmu', 'VMungo0251G2967' => 'vmu', 'VMungo0540G0864' => 'vmu', 'VMungo0540G1569' => 'vmu', 'VMungo0647G0317' => 'vmu', 'VMungo0720G1373' => 'vmu', 'VMungo0720G1508' => 'vmu', 'VMungo1080G0485' => 'vmu', 'VMungo1215G3177' => 'vmu', 'Zm00001eb112600' => 'zma', 'Zm00001eb120220' => 'zma', 'Zm00001eb153240' => 'zma', 'Zm00001eb168880' => 'zma', 'Zm00001eb213920' => 'zma', 'Zm00001eb228280' => 'zma', 'Zm00001eb254580' => 'zma', 'Zm00001eb272180' => 'zma', 'Zm00001eb293190' => 'zma', 'Zm00001eb322930' => 'zma', 'Zm00001eb353360' => 'zma', 'Zm00001eb353390' => 'zma', 'Zm00001eb353430' => 'zma', 'Zm00001eb353440' => 'zma', 'Zm00001eb353780' => 'zma' ), 'gf_id' => 'HOM05D000499', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000499' ), 'data_identifier' => 'HOM05D000499', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000499', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1066', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p29780' => 'bna', 'A02p33180' => 'bna', 'A03p16470' => 'bna', 'A03p66010' => 'bna', 'A04p25970' => 'bna', 'A06p01270' => 'bna', 'A06p46080' => 'bna', 'A07p11400' => 'bna', 'A08p01840' => 'bna', 'A08p08230' => 'bna', 'A08p25740' => 'bna', 'A09p32070' => 'bna', 'A09p37830' => 'bna', 'A09p42840' => 'bna', 'A09p42850' => 'bna', 'Aa31LG10G2060' => 'aar', 'Aa31LG2G7410' => 'aar', 'Aa31LG6G10200' => 'aar', 'Aa31LG6G16680' => 'aar', 'Aa31LG6G8470' => 'aar', 'Aa31LG9G12730' => 'aar', 'Aa31LG9G13680' => 'aar', 'Aa31LG9G14920' => 'aar', 'Aa31LG9G6650' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4977' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5467' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3254' => 'aag', 'Actinidia02578' => 'ach', 'Actinidia07693' => 'ach', 'Actinidia08413' => 'ach', 'Actinidia08414' => 'ach', 'Actinidia15289' => 'ach', 'Actinidia19871' => 'ach', 'Actinidia21475' => 'ach', 'Actinidia22576' => 'ach', 'Actinidia28327' => 'ach', 'Actinidia32491' => 'ach', 'Actinidia39463' => 'ach', 'Actinidia39571' => 'ach', 'Ah.01g013750' => 'amhyb', 'Ah.01g023210' => 'amhyb', 'Ah.04g164850' => 'amhyb', 'Ah.05g178060' => 'amhyb', 'Ah.07g204270' => 'amhyb', 'Ah.07g208480' => 'amhyb', 'Ah.09g237410' => 'amhyb', 'Ah.14g089460' => 'amhyb', 'AL1G41790' => 'aly', 'AL1G49050' => 'aly', 'AL1G53810' => 'aly', 'AL1G61400' => 'aly', 'AL4G18580' => 'aly', 'AL5G12510' => 'aly', 'AL5G12540' => 'aly', 'AL6G43230' => 'aly', 'AL7G10370' => 'aly', 'AL7G19250' => 'aly', 'AL8G12240' => 'aly', 'AL8G18540' => 'aly', 'Aqoxy1G02409' => 'aox', 'Aqoxy2G03993' => 'aox', 'Aqoxy3G03357' => 'aox', 'Aqoxy4G00785' => 'aox', 'Aqoxy5G02598' => 'aox', 'Aqoxy6G00132' => 'aox', 'Aqoxy7G01776' => 'aox', 'Aqoxy7G02316' => 'aox', 'Aqoxy7G03973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.12AFKW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B8730' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27IQR1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3F75VG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3RE0GA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41TCQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.527VTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FIR39' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5W8UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DA38EV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ63HS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H1I32C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HC27T5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4M8AP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7N3CZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9UVDZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LS1NQA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT1D4B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SKC4TM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCFV76' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF9Q1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQWD9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1ZM88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WE07RT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YCK7VH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJE6Q6' => 'arhy', 'AT1G28240' => 'ath', 'AT1G34550' => 'ath', 'AT1G53040' => 'ath', 'AT2G02910' => 'ath', 'AT4G09630' => 'ath', 'AT4G38500' => 'ath', 'AT5G42660' => 'ath', 'AT5G46220' => 'ath', 'ATR0152G026' => 'atr', 'ATR0564G343' => 'atr', 'ATR0706G151' => 'atr', 'ATR0733G207' => 'atr', 'ATR0751G234' => 'atr', 'ATR0807G048' => 'atr', 'ATR1091G084' => 'atr', 'Atru.chr10.1229' => 'acertr', 'Atru.chr10.1230' => 'acertr', 'Atru.chr10.1874' => 'acertr', 'Atru.chr11.1808' => 'acertr', 'Atru.chr13.1795' => 'acertr', 'Atru.chr13.570' => 'acertr', 'Atru.chr2.2608' => 'acertr', 'Atru.chr2.2609' => 'acertr', 'Atru.chr5.3428' => 'acertr', 'Atru.chr8.1171' => 'acertr', 'AUR62004651' => 'cqu', 'AUR62008675' => 'cqu', 'AUR62010014' => 'cqu', 'AUR62013004' => 'cqu', 'AUR62014825' => 'cqu', 'AUR62015015' => 'cqu', 'AUR62015151' => 'cqu', 'AUR62017020' => 'cqu', 'AUR62019422' => 'cqu', 'AUR62023570' => 'cqu', 'AUR62025571' => 'cqu', 'AUR62029098' => 'cqu', 'AUR62033863' => 'cqu', 'AUR62034296' => 'cqu', 'AUR62040075' => 'cqu', 'BcaB02g07334' => 'bca', 'BcaB02g10575' => 'bca', 'BcaB03g12119' => 'bca', 'BcaB03g12120' => 'bca', 'BcaB03g13945' => 'bca', 'BcaB04g17123' => 'bca', 'BcaB04g17867' => 'bca', 'BcaB04g19839' => 'bca', 'BcaB07g30317' => 'bca', 'BcaB07g32432' => 'bca', 'BcaB07g33362' => 'bca', 'BcaB08g36611' => 'bca', 'BcaC01g00028' => 'bca', 'BcaC01g01356' => 'bca', 'BcaC01g02034' => 'bca', 'BcaC01g06051' => 'bca', 'BcaC03g16839' => 'bca', 'BcaC03g17176' => 'bca', 'BcaC05g26829' => 'bca', 'BcaC06g31490' => 'bca', 'BcaC06g35344' => 'bca', 'BcaC06g36570' => 'bca', 'BcaC07g37537' => 'bca', 'BcaC08g43491' => 'bca', 'BcaC08g43773' => 'bca', 'BcaNung00234' => 'bca', 'BcaNung01982' => 'bca', 'BcaNung03707' => 'bca', 'BcaNung06454' => 'bca', 'BolC2t10762H' => 'bol', 'BolC2t11191H' => 'bol', 'BolC3t14322H' => 'bol', 'BolC3t19747H' => 'bol', 'BolC3t21425H' => 'bol', 'BolC4t27800H' => 'bol', 'BolC5t31423H' => 'bol', 'BolC6t35951H' => 'bol', 'BolC6t36282H' => 'bol', 'BolC7t40678H' => 'bol', 'BolC7t40679H' => 'bol', 'BolC7t42222H' => 'bol', 'BolC7t43492H' => 'bol', 'BolC7t46785H' => 'bol', 'BolC8t47853H' => 'bol', 'BolC9t56805H' => 'bol', 'BraA02t08000Z' => 'bra', 'BraA02t08341Z' => 'bra', 'BraA03t10936Z' => 'bra', 'BraA03t15657Z' => 'bra', 'BraA04t18100Z' => 'bra', 'BraA05t20523Z' => 'bra', 'BraA06t23353Z' => 'bra', 'BraA06t27473Z' => 'bra', 'BraA06t27769Z' => 'bra', 'BraA07t28928Z' => 'bra', 'BraA08t32236Z' => 'bra', 'BraA08t32841Z' => 'bra', 'BraA08t34524Z' => 'bra', 'BraA09t38742Z' => 'bra', 'BraA09t39295Z' => 'bra', 'C02p47180' => 'bna', 'C02p50990' => 'bna', 'C03p19360' => 'bna', 'C03p74950' => 'bna', 'C03p91000' => 'bna', 'C04p63260' => 'bna', 'C05p27050' => 'bna', 'C06p08750' => 'bna', 'C06p11490' => 'bna', 'C07p02820' => 'bna', 'C07p17180' => 'bna', 'C07p29440' => 'bna', 'C07p63730' => 'bna', 'C09p39260' => 'bna', 'CAN.G1164.34' => 'can', 'CAN.G1164.39' => 'can', 'CAN.G1530.3' => 'can', 'CAN.G162.61' => 'can', 'CAN.G176.6' => 'can', 'CAN.G289.49' => 'can', 'CAN.G370.21' => 'can', 'CAN.G370.22' => 'can', 'CAN.G371.117' => 'can', 'CAN.G58.37' => 'can', 'CAN.G588.98' => 'can', 'CANSAT21G2266' => 'cansat', 'CANSAT25G2799' => 'cansat', 'CANSAT35G0862' => 'cansat', 'CANSAT35G1704' => 'cansat', 'CANSAT35G1760' => 'cansat', 'CANSAT56G3971' => 'cansat', 'CANSAT56G4116' => 'cansat', 'CANSAT80G1259' => 'cansat', 'CARHR027730' => 'chi', 'CARHR033880' => 'chi', 'CARHR043270' => 'chi', 'CARHR145330' => 'chi', 'CARHR145340' => 'chi', 'CARHR175570' => 'chi', 'CARHR181570' => 'chi', 'CARHR258470' => 'chi', 'CARHR260490' => 'chi', 'CARHR294220' => 'chi', 'Carub.0001s2668' => 'cru', 'Carub.0001s3257' => 'cru', 'Carub.0001s4220' => 'cru', 'Carub.0005s0179' => 'cru', 'Carub.0006s2807' => 'cru', 'Carub.0007s0039' => 'cru', 'Carub.0008s0169' => 'cru', 'Carub.0008s0636' => 'cru', 'Ca_00338_v3' => 'car', 'Ca_00542_v3' => 'car', 'Ca_01844_v3' => 'car', 'Ca_10611_v3' => 'car', 'Ca_13326_v3' => 'car', 'Ca_17944_v3' => 'car', 'Ca_18546_v3' => 'car', 'Ca_24219_v3' => 'car', 'Ca_29972_v3' => 'car', 'CBR_g3681' => 'cbr', 'CBR_g40021' => 'cbr', 'Cc01_g08140' => 'ccan', 'Cc02_g13410' => 'ccan', 'Cc02_g37480' => 'ccan', 'Cc05_g12030' => 'ccan', 'Cc09_g03370' => 'ccan', 'Cc09_g10300' => 'ccan', 'Cc10_g03530' => 'ccan', 'Cc10_g11380' => 'ccan', 'CDE01G0176' => 'cde', 'CDE02G0675' => 'cde', 'CDE02G0942' => 'cde', 'CDE02G1153' => 'cde', 'CDE02G4177' => 'cde', 'CDE04G2117' => 'cde', 'CDE04G2736' => 'cde', 'CDE08G1161' => 'cde', 'CDE09G1238' => 'cde', 'Cfa000467' => 'cfa', 'Cfa000947' => 'cfa', 'Cfa004969' => 'cfa', 'Cfa005284' => 'cfa', 'Cfa008993' => 'cfa', 'Cfa018187' => 'cfa', 'Cfa018454' => 'cfa', 'Cfa020585' => 'cfa', 'Ciclev10000424m.g' => 'ccl', 'Ciclev10003605m.g' => 'ccl', 'Ciclev10007828m.g' => 'ccl', 'Ciclev10014620m.g' => 'ccl', 'Ciclev10015169m.g' => 'ccl', 'Ciclev10018291m.g' => 'ccl', 'Ciclev10028256m.g' => 'ccl', 'Ciclev10033822m.g' => 'ccl', 'CiPaw.05G060300' => 'cil', 'CiPaw.05G085000' => 'cil', 'CiPaw.06G083700' => 'cil', 'CiPaw.06G120300' => 'cil', 'CiPaw.09G060500' => 'cil', 'CiPaw.09G123800' => 'cil', 'CiPaw.11G169700' => 'cil', 'CiPaw.12G118300' => 'cil', 'CiPaw.15G071000' => 'cil', 'CiPaw.15G081900' => 'cil', 'ClCG01G024610' => 'cla', 'ClCG03G006070' => 'cla', 'ClCG05G019250' => 'cla', 'ClCG09G009500' => 'cla', 'ClCG11G008200' => 'cla', 'ClCG11G018080' => 'cla', 'COL.COLO4_17373' => 'col', 'COL.COLO4_22994' => 'col', 'COL.COLO4_26389' => 'col', 'COL.COLO4_27170' => 'col', 'COL.COLO4_31074' => 'col', 'COL.COLO4_31465' => 'col', 'COL.COLO4_36438' => 'col', 'COL.COLO4_36439' => 'col', 'Cpa.g.c38781' => 'cpa', 'Cpa.g.sc128.12' => 'cpa', 'Cpa.g.sc166.7' => 'cpa', 'Cpa.g.sc166.8' => 'cpa', 'Cpa.g.sc20.111' => 'cpa', 'Cpa.g.sc27.31' => 'cpa', 'Cpa.g.sc64.36' => 'cpa', 'Cpa.g.sc64.37' => 'cpa', 'Cpa.g.sc66.49' => 'cpa', 'Cpa.g.sc80.64' => 'cpa', 'CsaV3_1G012320' => 'csa', 'CsaV3_2G008480' => 'csa', 'CsaV3_2G033450' => 'csa', 'CsaV3_3G044830' => 'csa', 'CsaV3_4G033710' => 'csa', 'CsaV3_6G051730' => 'csa', 'CsaV3_7G025350' => 'csa', 'CSS0001067' => 'camsi', 'CSS0005996' => 'camsi', 'CSS0006590' => 'camsi', 'CSS0009673' => 'camsi', 'CSS0010201' => 'camsi', 'CSS0010549' => 'camsi', 'CSS0011364' => 'camsi', 'CSS0014473' => 'camsi', 'CSS0014961' => 'camsi', 'CSS0020191' => 'camsi', 'CSS0021165' => 'camsi', 'CSS0022306' => 'camsi', 'CSS0030591' => 'camsi', 'CSS0030696' => 'camsi', 'CSS0032653' => 'camsi', 'CSS0037487' => 'camsi', 'CSS0041102' => 'camsi', 'CSS0041261' => 'camsi', 'CSS0046246' => 'camsi', 'CSS0049256' => 'camsi', 'DCAR_004075' => 'dca', 'DCAR_011538' => 'dca', 'DCAR_019553' => 'dca', 'DCAR_020952' => 'dca', 'DCAR_021739' => 'dca', 'DCAR_027407' => 'dca', 'DCAR_027913' => 'dca', 'DCAR_028066' => 'dca', 'Dinv05899' => 'din', 'Dinv07563' => 'din', 'Dinv08010' => 'din', 'Dinv14125' => 'din', 'Dinv20172' => 'din', 'Dinv30743' => 'din', 'Dinv31229' => 'din', 'Dinv34162' => 'din', 'Dinv36028' => 'din', 'Dinv39368' => 'din', 'Dinv40565' => 'din', 'Dinv41706' => 'din', 'Duzib052G0089' => 'dzi', 'Duzib116G0641' => 'dzi', 'Duzib132G0069' => 'dzi', 'Duzib132G1219' => 'dzi', 'Duzib147G0278' => 'dzi', 'Duzib160G0480' => 'dzi', 'Duzib170G0661' => 'dzi', 'Duzib177G0591' => 'dzi', 'Duzib187G1353' => 'dzi', 'Duzib192G0858' => 'dzi', 'Duzib192G0883' => 'dzi', 'Duzib213G0506' => 'dzi', 'Duzib235G0289' => 'dzi', 'Duzib251G0422' => 'dzi', 'ECA232G3898' => 'eca', 'ECA233G5950' => 'eca', 'ECA234G1699' => 'eca', 'ECA234G2421' => 'eca', 'ECA236G0426' => 'eca', 'ECA236G4331' => 'eca', 'ECA248G2573' => 'eca', 'EL10Ac1g00077' => 'bvu', 'EL10Ac1g01746' => 'bvu', 'EL10Ac2g03464' => 'bvu', 'EL10Ac4g08176' => 'bvu', 'EL10Ac7g17521' => 'bvu', 'EL10Ac8g20386' => 'bvu', 'EL10Ac9g21343' => 'bvu', 'EL10Ac9g22688' => 'bvu', 'Eucgr.B03434' => 'egr', 'Eucgr.D00618' => 'egr', 'Eucgr.E02395' => 'egr', 'Eucgr.F01129' => 'egr', 'Eucgr.F02622' => 'egr', 'Eucgr.F04207' => 'egr', 'FAN01G0570' => 'fan', 'FAN03G3351' => 'fan', 'FAN06G3702' => 'fan', 'FAN07G2149' => 'fan', 'FAN10G3758' => 'fan', 'FAN11G1170' => 'fan', 'FAN11G2050' => 'fan', 'FAN11G2724' => 'fan', 'FAN12G1700' => 'fan', 'FAN12G2028' => 'fan', 'FAN15G1160' => 'fan', 'FAN15G3063' => 'fan', 'FAN16G2540' => 'fan', 'FAN16G3077' => 'fan', 'FAN16G3624' => 'fan', 'FAN17G0221' => 'fan', 'FAN20G2492' => 'fan', 'FAN20G2905' => 'fan', 'FAN21G0548' => 'fan', 'FAN21G1300' => 'fan', 'FAN22G0077' => 'fan', 'FAN22G1315' => 'fan', 'FAN24G1280' => 'fan', 'FAN24G1445' => 'fan', 'FAN24G3527' => 'fan', 'FAN25G0464' => 'fan', 'FAN25G2885' => 'fan', 'FAN25G3270' => 'fan', 'FAN27G1101' => 'fan', 'FAN27G2846' => 'fan', 'FAN27G3524' => 'fan', 'FvH4_2g11770' => 'fve', 'FvH4_2g15630' => 'fve', 'FvH4_3g05570' => 'fve', 'FvH4_3g09110' => 'fve', 'FvH4_3g19940' => 'fve', 'FvH4_4g04821' => 'fve', 'FvH4_4g31480' => 'fve', 'FvH4_7g01740' => 'fve', 'Glyma.05G130400' => 'gma', 'Glyma.05G156400' => 'gma', 'Glyma.07G197000' => 'gma', 'Glyma.08G085151' => 'gma', 'Glyma.08G114500' => 'gma', 'Glyma.08G300400' => 'gma', 'Glyma.10G215800' => 'gma', 'Glyma.12G224400' => 'gma', 'Glyma.13G179300' => 'gma', 'Glyma.13G218151' => 'gma', 'Glyma.13G238800' => 'gma', 'Glyma.13G276900' => 'gma', 'Glyma.14G078200' => 'gma', 'Glyma.15G074500' => 'gma', 'Glyma.15G094100' => 'gma', 'Glyma.17G247200' => 'gma', 'Glyma.18G120100' => 'gma', 'Glyma.20G176000' => 'gma', 'Gohir.A01G063600' => 'ghi', 'Gohir.A01G170301' => 'ghi', 'Gohir.A02G060500' => 'ghi', 'Gohir.A05G133850' => 'ghi', 'Gohir.A05G161400' => 'ghi', 'Gohir.A06G012900' => 'ghi', 'Gohir.A06G035901' => 'ghi', 'Gohir.A06G127100' => 'ghi', 'Gohir.A06G210500' => 'ghi', 'Gohir.A08G008650' => 'ghi', 'Gohir.A09G072700' => 'ghi', 'Gohir.A09G088301' => 'ghi', 'Gohir.A10G040600' => 'ghi', 'Gohir.A12G036300' => 'ghi', 'Gohir.A12G143350' => 'ghi', 'Gohir.A12G165500' => 'ghi', 'Gohir.A13G145700' => 'ghi', 'Gohir.D01G050000' => 'ghi', 'Gohir.D01G051366' => 'ghi', 'Gohir.D01G161350' => 'ghi', 'Gohir.D02G065900' => 'ghi', 'Gohir.D05G164200' => 'ghi', 'Gohir.D05G355500' => 'ghi', 'Gohir.D06G010400' => 'ghi', 'Gohir.D06G111250' => 'ghi', 'Gohir.D06G132000' => 'ghi', 'Gohir.D06G210500' => 'ghi', 'Gohir.D07G165675' => 'ghi', 'Gohir.D08G062240' => 'ghi', 'Gohir.D08G086101' => 'ghi', 'Gohir.D08G138060' => 'ghi', 'Gohir.D09G072300' => 'ghi', 'Gohir.D10G041400' => 'ghi', 'Gohir.D11G191020' => 'ghi', 'Gohir.D11G212066' => 'ghi', 'Gohir.D12G036300' => 'ghi', 'Gohir.D12G168600' => 'ghi', 'Gohir.D13G150600' => 'ghi', 'Gorai.001G057300' => 'gra', 'Gorai.002G069900' => 'gra', 'Gorai.002G200000' => 'gra', 'Gorai.003G067600' => 'gra', 'Gorai.005G074800' => 'gra', 'Gorai.006G087300' => 'gra', 'Gorai.008G037500' => 'gra', 'Gorai.008G181400' => 'gra', 'Gorai.009G169400' => 'gra', 'Gorai.009G387900' => 'gra', 'Gorai.010G013300' => 'gra', 'Gorai.010G153800' => 'gra', 'Gorai.010G255800' => 'gra', 'Gorai.011G043700' => 'gra', 'Gorai.011G198900' => 'gra', 'Gorai.013G168400' => 'gra', 'GSVIVG01005212001' => 'vvi', 'GSVIVG01006163001' => 'vvi', 'GSVIVG01009625001' => 'vvi', 'GSVIVG01014338001' => 'vvi', 'GSVIVG01020005001' => 'vvi', 'GSVIVG01021450001' => 'vvi', 'GSVIVG01023975001' => 'vvi', 'GSVIVG01034490001' => 'vvi', 'HanXRQChr04g0112071' => 'han', 'HanXRQChr05g0131151' => 'han', 'HanXRQChr09g0262371' => 'han', 'HanXRQChr09g0268401' => 'han', 'HanXRQChr10g0279241' => 'han', 'HanXRQChr10g0297961' => 'han', 'HanXRQChr11g0326231' => 'han', 'HanXRQChr11g0328471' => 'han', 'HanXRQChr16g0507941' => 'han', 'HanXRQChr17g0560211' => 'han', 'Haze_02108' => 'cav', 'Haze_02428' => 'cav', 'Haze_05593' => 'cav', 'Haze_06448' => 'cav', 'Haze_09427' => 'cav', 'Haze_12022' => 'cav', 'Haze_17612' => 'cav', 'Haze_17928' => 'cav', 'Hma1.2p1_0032F.1_g019250' => 'hma', 'Hma1.2p1_0163F.1_g072690' => 'hma', 'Hma1.2p1_0265F.1_g106710' => 'hma', 'Hma1.2p1_0286F.1_g113970' => 'hma', 'Hma1.2p1_0363F.1_g136640' => 'hma', 'Hma1.2p1_0584F.1_g183470' => 'hma', 'Hma1.2p1_0885F.1_g232570' => 'hma', 'HPP92_006022' => 'vpl', 'HPP92_007320' => 'vpl', 'HPP92_011521' => 'vpl', 'HPP92_019387' => 'vpl', 'HPP92_024038' => 'vpl', 'Hund05891' => 'sun', 'Hund06450' => 'sun', 'Hund12053' => 'sun', 'Hund16800' => 'sun', 'Hund21222' => 'sun', 'Hund22896' => 'sun', 'Hund23746' => 'sun', 'Hund27083' => 'sun', 'Lalb_Chr02g0141831' => 'lal', 'Lalb_Chr02g0141841' => 'lal', 'Lalb_Chr05g0220411' => 'lal', 'Lalb_Chr06g0162081' => 'lal', 'Lalb_Chr09g0327651' => 'lal', 'Lalb_Chr13g0295051' => 'lal', 'Lalb_Chr15g0086801' => 'lal', 'Lalb_Chr16g0383781' => 'lal', 'Lalb_Chr16g0383791' => 'lal', 'Lalb_Chr18g0055441' => 'lal', 'Lalb_Chr18g0059611' => 'lal', 'Lalb_Chr20g0109661' => 'lal', 'Lalb_Chr20g0109831' => 'lal', 'Lalb_Chr20g0121871' => 'lal', 'Lalb_Chr22g0355361' => 'lal', 'Lalb_Chr25g0286371' => 'lal', 'Lj1A1187G43' => 'lonja', 'Lj1A1205T50' => 'lonja', 'Lj1A800G33' => 'lonja', 'Lj1C1187T7' => 'lonja', 'Lj1C843T11' => 'lonja', 'Lj1g0010940' => 'lja', 'Lj2A288T69' => 'lonja', 'Lj3g0024276' => 'lja', 'Lj4A47T76' => 'lonja', 'Lj4g0005805' => 'lja', 'Lj4g0006097' => 'lja', 'Lj4g0008528' => 'lja', 'Lj4g0024907' => 'lja', 'Lj5g0012472' => 'lja', 'Lj5g0018648' => 'lja', 'Lj6C789G1' => 'lonja', 'Lj6g0004000' => 'lja', 'Lj7A292G67' => 'lonja', 'Lj7A292T64' => 'lonja', 'Lj9A400T58' => 'lonja', 'Lsat_1_v5_gn_1_126181' => 'lsa', 'Lsat_1_v5_gn_4_123041' => 'lsa', 'Lsat_1_v5_gn_4_133620' => 'lsa', 'Lsat_1_v5_gn_4_53221' => 'lsa', 'Lsat_1_v5_gn_4_71961' => 'lsa', 'Lsat_1_v5_gn_7_105241' => 'lsa', 'Lsat_1_v5_gn_7_21361' => 'lsa', 'Lsat_1_v5_gn_7_28860' => 'lsa', 'Lsat_1_v5_gn_7_31260' => 'lsa', 'Lsat_1_v5_gn_8_52801' => 'lsa', 'Manes.02G191400' => 'mes', 'Manes.03G110100' => 'mes', 'Manes.04G071100' => 'mes', 'Manes.05G100500' => 'mes', 'Manes.05G164700' => 'mes', 'Manes.15G087000' => 'mes', 'Manes.15G121500' => 'mes', 'Manes.16G028300' => 'mes', 'Manes.17G046100' => 'mes', 'Manes.17G069800' => 'mes', 'Manes.18G100500' => 'mes', 'Mapoly0002s0109' => 'mpo', 'Mapoly0024s0007' => 'mpo', 'Mapoly0089s0032' => 'mpo', 'MBI04_g42241_MAGBIO' => 'mbi', 'MBI05_g11988_MAGBIO' => 'mbi', 'MBI05_g35452_MAGBIO' => 'mbi', 'MBI07_g30179_MAGBIO' => 'mbi', 'MBI07_g35859_MAGBIO' => 'mbi', 'MBI07_g35860_MAGBIO' => 'mbi', 'MBI07_g37166_MAGBIO' => 'mbi', 'MBI08_g18172_MAGBIO' => 'mbi', 'MBI09_g08441_MAGBIO' => 'mbi', 'MBI13_g01676_MAGBIO' => 'mbi', 'MBI14_g42955_MAGBIO' => 'mbi', 'MBI16_g13161_MAGBIO' => 'mbi', 'MBI17_g27204_MAGBIO' => 'mbi', 'MBI19_g21595_MAGBIO' => 'mbi', 'MD00G1148400' => 'mdo', 'MD02G1301200' => 'mdo', 'MD03G1227800' => 'mdo', 'MD05G1041100' => 'mdo', 'MD05G1124800' => 'mdo', 'MD05G1284000' => 'mdo', 'MD05G1338800' => 'mdo', 'MD05G1338900' => 'mdo', 'MD07G1022800' => 'mdo', 'MD10G1047500' => 'mdo', 'MD10G1127500' => 'mdo', 'MD10G1262300' => 'mdo', 'MD10G1293800' => 'mdo', 'MD16G1074300' => 'mdo', 'Medtr1g021670' => 'mtr', 'Medtr1g096320' => 'mtr', 'Medtr2g013690' => 'mtr', 'Medtr2g019450' => 'mtr', 'Medtr2g085170' => 'mtr', 'Medtr4g088785' => 'mtr', 'Medtr8g055930' => 'mtr', 'Medtr8g085850' => 'mtr', 'MELO3C002605.2' => 'cme', 'MELO3C003891.2' => 'cme', 'MELO3C004012.2' => 'cme', 'MELO3C007134.2' => 'cme', 'MELO3C008118.2' => 'cme', 'MELO3C016700.2' => 'cme', 'MELO3C024127.2' => 'cme', 'MELO3C033361.2' => 'cme', 'MELO3C033362.2' => 'cme', 'Migut.C00430' => 'egut', 'Migut.C01246' => 'egut', 'Migut.E00101' => 'egut', 'Migut.H01486' => 'egut', 'Migut.H01939' => 'egut', 'Migut.K00360' => 'egut', 'Migut.M00910' => 'egut', 'Migut.M01139' => 'egut', 'Migut.N02677' => 'egut', 'MSTRG.13252' => 'ama', 'MSTRG.14701' => 'ama', 'MSTRG.1521' => 'ama', 'MSTRG.15884' => 'ama', 'MSTRG.16242' => 'ama', 'MSTRG.22285' => 'ama', 'MSTRG.22444' => 'ama', 'MSTRG.2349' => 'ama', 'MSTRG.26308' => 'ama', 'MSTRG.28296' => 'ama', 'MSTRG.9895' => 'ama', 'Nitab4.5_0000110g0060' => 'nta', 'Nitab4.5_0000420g0130' => 'nta', 'Nitab4.5_0000422g0030' => 'nta', 'Nitab4.5_0000560g0180' => 'nta', 'Nitab4.5_0000703g0100' => 'nta', 'Nitab4.5_0000786g0200' => 'nta', 'Nitab4.5_0001336g0020' => 'nta', 'Nitab4.5_0001796g0030' => 'nta', 'Nitab4.5_0003348g0060' => 'nta', 'Nitab4.5_0003698g0040' => 'nta', 'Nitab4.5_0003942g0090' => 'nta', 'Nitab4.5_0004775g0070' => 'nta', 'Nitab4.5_0004864g0030' => 'nta', 'Nitab4.5_0005615g0020' => 'nta', 'Nitab4.5_0009288g0030' => 'nta', 'Nitab4.5_0009341g0010' => 'nta', 'Nitab4.5_0009535g0010' => 'nta', 'Nn1g03995' => 'nnu', 'Nn1g04100' => 'nnu', 'Nn1g06530' => 'nnu', 'Nn3g16404' => 'nnu', 'Nn3g17212' => 'nnu', 'Nn3g20776' => 'nnu', 'Nn3g21923' => 'nnu', 'Nn5g27737' => 'nnu', 'Nn5g29461' => 'nnu', 'Nn7g38355' => 'nnu', 'Nn8g39873' => 'nnu', 'Oeu000548.2' => 'oeu', 'Oeu004672.1' => 'oeu', 'Oeu015605.2' => 'oeu', 'Oeu016092.1' => 'oeu', 'Oeu017879.3' => 'oeu', 'Oeu024910.1' => 'oeu', 'Oeu028965.1' => 'oeu', 'Oeu031269.1' => 'oeu', 'Oeu031270.1' => 'oeu', 'Oeu032535.1' => 'oeu', 'Oeu034151.1' => 'oeu', 'Oeu034152.1' => 'oeu', 'Oeu034588.2' => 'oeu', 'Oeu050846.1' => 'oeu', 'Oeu050849.2' => 'oeu', 'Oeu051063.2' => 'oeu', 'Oeu052368.1' => 'oeu', 'Oeu052370.1' => 'oeu', 'Os01g0210400' => 'osa', 'Os01g0304300' => 'osa', 'Os01g0749100' => 'osa', 'Os02g0745800' => 'osa', 'Os03g0769050' => 'osa', 'Os05g0531500' => 'osa', 'Os06g0724300' => 'osa', 'Os11g0198100' => 'osa', 'Peaxi162Scf00069g01425' => 'pax', 'Peaxi162Scf00280g00811' => 'pax', 'Peaxi162Scf00310g00615' => 'pax', 'Peaxi162Scf00362g00542' => 'pax', 'Peaxi162Scf00461g00310' => 'pax', 'Peaxi162Scf00530g00118' => 'pax', 'Peaxi162Scf00541g00057' => 'pax', 'Peaxi162Scf00661g00017' => 'pax', 'Peaxi162Scf00926g00027' => 'pax', 'Peaxi162Scf01064g00263' => 'pax', 'Peaxi162Scf01211g00135' => 'pax', 'PGR004G2336' => 'pgr', 'PGR042G0327' => 'pgr', 'PGR042G1957' => 'pgr', 'PGR042G2003' => 'pgr', 'PGR042G3929' => 'pgr', 'PGR083G1137' => 'pgr', 'PGR083G1364' => 'pgr', 'PGSC0003DMG400003381' => 'stu', 'PGSC0003DMG400003417' => 'stu', 'PGSC0003DMG400008981' => 'stu', 'PGSC0003DMG400012417' => 'stu', 'PGSC0003DMG400012823' => 'stu', 'PGSC0003DMG400016885' => 'stu', 'PGSC0003DMG400022812' => 'stu', 'PGSC0003DMG400029726' => 'stu', 'PGSC0003DMG401009243' => 'stu', 'PGSC0003DMG401031505' => 'stu', 'PGSC0003DMG402031505' => 'stu', 'Phvul.001G017600' => 'pvu', 'Phvul.002G193500' => 'pvu', 'Phvul.002G228900' => 'pvu', 'Phvul.002G236800' => 'pvu', 'Phvul.003G049500' => 'pvu', 'Phvul.005G072000' => 'pvu', 'Phvul.006G164800' => 'pvu', 'Phvul.006G185100' => 'pvu', 'Phvul.007G090000' => 'pvu', 'Potri.001G399800' => 'ptr', 'Potri.002G149900' => 'ptr', 'Potri.004G044100' => 'ptr', 'Potri.004G177600' => 'ptr', 'Potri.009G138000' => 'ptr', 'Potri.010G094000' => 'ptr', 'Potri.011G053000' => 'ptr', 'Potri.011G119300' => 'ptr', 'Potri.013G113700' => 'ptr', 'Potri.018G107800' => 'ptr', 'Potri.019G084100' => 'ptr', 'Pp3c14_23720' => 'ppa', 'Pp3c16_6340' => 'ppa', 'Pp3c23_13420' => 'ppa', 'Pp3c24_2740' => 'ppa', 'Pp3c25_860' => 'ppa', 'Pp3c8_21750' => 'ppa', 'Prupe.1G273000' => 'ppe', 'Prupe.1G273700' => 'ppe', 'Prupe.1G274100' => 'ppe', 'Prupe.2G023300' => 'ppe', 'Prupe.4G048000' => 'ppe', 'Prupe.4G080400' => 'ppe', 'Prupe.4G181200' => 'ppe', 'Prupe.8G056900' => 'ppe', 'Prupe.8G168700' => 'ppe', 'Psat1g189080' => 'psa', 'Psat1g204760' => 'psa', 'Psat4g175560' => 'psa', 'Psat4g177720' => 'psa', 'Psat5g244240' => 'psa', 'Psat6g010720' => 'psa', 'Psat6g187200' => 'psa', 'Psat7g072040' => 'psa', 'PSO017G3501' => 'pso', 'PSO063G2148' => 'pso', 'PSO063G5608' => 'pso', 'PSO210G6392' => 'pso', 'PSO541G2319' => 'pso', 'PSO541G2836' => 'pso', 'PSO541G4012' => 'pso', 'PSO541G6253' => 'pso', 'PSO675G0580' => 'pso', 'PSO675G0856' => 'pso', 'PSO675G5635' => 'pso', 'PSO675G9157' => 'pso', 'PSO832G1660' => 'pso', 'PSO832G1969' => 'pso', 'QL02p007186' => 'qlo', 'QL02p033904' => 'qlo', 'QL03p064391' => 'qlo', 'QL05p040593' => 'qlo', 'QL05p058242' => 'qlo', 'QL08p021825' => 'qlo', 'QL11p004981' => 'qlo', 'RcHm_v2.0_Chr1g0318301' => 'rch', 'RcHm_v2.0_Chr4g0418501' => 'rch', 'RcHm_v2.0_Chr4g0439971' => 'rch', 'RcHm_v2.0_Chr5g0008541' => 'rch', 'RcHm_v2.0_Chr5g0014101' => 'rch', 'RcHm_v2.0_Chr5g0014131' => 'rch', 'RcHm_v2.0_Chr5g0033621' => 'rch', 'RcHm_v2.0_Chr6g0272041' => 'rch', 'RcHm_v2.0_Chr6g0278831' => 'rch', 'Rhsim02G0130400' => 'rsi', 'Rhsim02G0171100' => 'rsi', 'Rhsim05G0053000' => 'rsi', 'Rhsim05G0053100' => 'rsi', 'Rhsim06G0096500' => 'rsi', 'Rhsim06G0096600' => 'rsi', 'Rhsim06G0199100' => 'rsi', 'Rhsim12G0062300' => 'rsi', 'Rhsim12G0062800' => 'rsi', 'Sabra02G0118600' => 'sbr', 'Sabra04G0027300' => 'sbr', 'Sabra04G0119500' => 'sbr', 'Sabra08G0112500' => 'sbr', 'Sabra11G0036800' => 'sbr', 'Sabra11G0103800' => 'sbr', 'Sabra13G0096300' => 'sbr', 'Sabra16G0262300' => 'sbr', 'Sabra18G0091700' => 'sbr', 'Sabra19G0095400' => 'sbr', 'SalBow6G3080' => 'sbo', 'SalBow7G1157' => 'sbo', 'SalBow7G2123' => 'sbo', 'SalBow7G2285' => 'sbo', 'SalBow7G3537' => 'sbo', 'SalBow8G2947' => 'sbo', 'SalBow8G4463' => 'sbo', 'SalBow8G5466' => 'sbo', 'Sc01g0001750' => 'sci', 'Sc02g0006640' => 'sci', 'Sc02g0006670' => 'sci', 'Sc04g0008220' => 'sci', 'Sc05g0006190' => 'sci', 'Sc08g0002760' => 'sci', 'Sc17g0006170' => 'sci', 'Sc22g0002050' => 'sci', 'Sc23g0001190' => 'sci', 'Sc24g0000980' => 'sci', 'Sed0006245' => 'sed', 'Sed0007543' => 'sed', 'Sed0009411' => 'sed', 'Sed0010765' => 'sed', 'Sed0012944' => 'sed', 'Sed0014682' => 'sed', 'Sed0016174' => 'sed', 'Sed0016796' => 'sed', 'Sed0020317' => 'sed', 'Sed0021467' => 'sed', 'SEGI_01316' => 'sgi', 'SEGI_03374' => 'sgi', 'SEGI_16265' => 'sgi', 'SEGI_18569' => 'sgi', 'SEGI_20351' => 'sgi', 'SEGI_26395' => 'sgi', 'SEGI_29469' => 'sgi', 'SEGI_34771' => 'sgi', 'SEGI_36769' => 'sgi', 'SEGI_37139' => 'sgi', 'SGA_v2.0_scaffold100G29687' => 'sas', 'SGA_v2.0_scaffold118G32472' => 'sas', 'SGA_v2.0_scaffold14G07051' => 'sas', 'SGA_v2.0_scaffold183G39845' => 'sas', 'SGA_v2.0_scaffold1G00174' => 'sas', 'SGA_v2.0_scaffold22G09714' => 'sas', 'SGA_v2.0_scaffold333G48992' => 'sas', 'SGA_v2.0_scaffold46G17491' => 'sas', 'SGA_v2.0_scaffold49G18294' => 'sas', 'SGA_v2.0_scaffold63G21658' => 'sas', 'SHI01741' => 'shi', 'SHI05771' => 'shi', 'SHI18077' => 'shi', 'SHI20525' => 'shi', 'SHI20527' => 'shi', 'SHI20528' => 'shi', 'SMO172G0185' => 'smo', 'SMO198G0020' => 'smo', 'SMO351G0006' => 'smo', 'SMO356G0118' => 'smo', 'SMO358G0296' => 'smo', 'SMO367G0079' => 'smo', 'SMO367G1277' => 'smo', 'Solyc01g014220.3' => 'sly', 'Solyc01g111770.2' => 'sly', 'Solyc02g078180.3' => 'sly', 'Solyc03g006430.3' => 'sly', 'Solyc03g006456.1' => 'sly', 'Solyc03g079860.2' => 'sly', 'Solyc04g079770.3' => 'sly', 'Solyc05g007430.4' => 'sly', 'Solyc07g063150.3' => 'sly', 'Solyc08g016620.3' => 'sly', 'Solyc09g057590.3' => 'sly', 'Solyc09g057600.1' => 'sly', 'Solyc10g009050.3' => 'sly', 'Solyc11g017420.2' => 'sly', 'Sopen01g053810' => 'spe', 'Sopen02g023040' => 'spe', 'Sopen03g002440' => 'spe', 'Sopen04g033350' => 'spe', 'Sopen05g003310' => 'spe', 'Sopen07g004050' => 'spe', 'Sopen07g031340' => 'spe', 'Sopen08g006990' => 'spe', 'Sopen10g004830' => 'spe', 'Sopen11g009370' => 'spe', 'Sp1g24450' => 'spa', 'Sp1g29670' => 'spa', 'Sp1g39600' => 'spa', 'Sp2g11080' => 'spa', 'Sp2g13970' => 'spa', 'Sp4g16130' => 'spa', 'Sp6g13080' => 'spa', 'Sp7g37270' => 'spa', 'TAR371G0065' => 'tar', 'TAR376G0340' => 'tar', 'TAR376G0435' => 'tar', 'TAR381G0002' => 'tar', 'TAR381G1236' => 'tar', 'TAR624G0055' => 'tar', 'TAR624G0324' => 'tar', 'TAR624G0696' => 'tar', 'TAR624G0906' => 'tar', 'TAR625G0107' => 'tar', 'TAR626G0015' => 'tar', 'TAR626G1356' => 'tar', 'TAR627G0888' => 'tar', 'TAR628G0399' => 'tar', 'TAR628G1327' => 'tar', 'TAR629G2831' => 'tar', 'TAR629G2874' => 'tar', 'TAR633G1432' => 'tar', 'TAR633G2771' => 'tar', 'THA.LOC104803394' => 'tha', 'THA.LOC104805153' => 'tha', 'THA.LOC104806784' => 'tha', 'THA.LOC104810473' => 'tha', 'THA.LOC104813100' => 'tha', 'THA.LOC104814215' => 'tha', 'THA.LOC104815554' => 'tha', 'THA.LOC104820544' => 'tha', 'THA.LOC104824754' => 'tha', 'THA.LOC104827717' => 'tha', 'Thecc.02G031400' => 'tca', 'Thecc.02G055900' => 'tca', 'Thecc.02G350800' => 'tca', 'Thecc.06G150900' => 'tca', 'Thecc.06G186600' => 'tca', 'Thecc.07G089600' => 'tca', 'Thecc.08G020400' => 'tca', 'Thecc.08G182100' => 'tca', 'Thhalv10000873m.g' => 'esa', 'Thhalv10004185m.g' => 'esa', 'Thhalv10006981m.g' => 'esa', 'Thhalv10007204m.g' => 'esa', 'Thhalv10011374m.g' => 'esa', 'Thhalv10013482m.g' => 'esa', 'Thhalv10017801m.g' => 'esa', 'Thhalv10024983m.g' => 'esa', 'TPR.G12072' => 'tpr', 'TPR.G15769' => 'tpr', 'TPR.G16504' => 'tpr', 'TPR.G16506' => 'tpr', 'TPR.G24345' => 'tpr', 'TPR.G26666' => 'tpr', 'TPR.G27320' => 'tpr', 'TPR.G31819' => 'tpr', 'TPR.G38879' => 'tpr', 'TPR.G39015' => 'tpr', 'TPR.G8819' => 'tpr', 'TWI09G0924' => 'twi', 'TWI12G0811' => 'twi', 'TWI12G1294' => 'twi', 'TWI31G0150' => 'twi', 'TWI36G1262' => 'twi', 'TWI38G1287' => 'twi', 'TWI38G1633' => 'twi', 'TWI38G1982' => 'twi', 'TWI39G0116' => 'twi', 'TWI60G1011' => 'twi', 'TWI63G0171' => 'twi', 'TWI73G0839' => 'twi', 'TWI79G1511' => 'twi', 'unitig_0.g915' => 'ugi', 'unitig_0.g916' => 'ugi', 'unitig_21.g20219' => 'ugi', 'unitig_21.g20416' => 'ugi', 'unitig_578.g16132' => 'ugi', 'unitig_578.g16718' => 'ugi', 'unitig_62.g23481' => 'ugi', 'unitig_744.g24535' => 'ugi', 'unitig_749.g13525' => 'ugi', 'vmacro01248' => 'vma', 'vmacro02290' => 'vma', 'vmacro10946' => 'vma', 'vmacro11865' => 'vma', 'vmacro12493' => 'vma', 'vmacro17322' => 'vma', 'vmacro21599' => 'vma', 'vmacro23041' => 'vma', 'VMungo0251G0004' => 'vmu', 'VMungo0251G2639' => 'vmu', 'VMungo0251G2967' => 'vmu', 'VMungo0540G0864' => 'vmu', 'VMungo0540G1569' => 'vmu', 'VMungo0647G0317' => 'vmu', 'VMungo0720G1373' => 'vmu', 'VMungo0720G1508' => 'vmu', 'VMungo1080G0485' => 'vmu', 'VMungo1215G3177' => 'vmu', 'Zm00001eb112600' => 'zma', 'Zm00001eb120220' => 'zma', 'Zm00001eb153240' => 'zma', 'Zm00001eb168880' => 'zma', 'Zm00001eb213920' => 'zma', 'Zm00001eb228280' => 'zma', 'Zm00001eb254580' => 'zma', 'Zm00001eb272180' => 'zma', 'Zm00001eb293190' => 'zma', 'Zm00001eb322930' => 'zma', 'Zm00001eb353360' => 'zma', 'Zm00001eb353390' => 'zma', 'Zm00001eb353430' => 'zma', 'Zm00001eb353440' => 'zma', 'Zm00001eb353780' => 'zma' ) $gf_id = 'HOM05D000499' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000499' ) $data_identifier = 'HOM05D000499' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 29, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 12, 'amhyb' => (int) 8, 'aly' => (int) 12, 'aox' => (int) 9, 'arhy' => (int) 26, 'ath' => (int) 8, 'atr' => (int) 7, 'acertr' => (int) 10, 'cqu' => (int) 15, 'bca' => (int) 29, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 11, 'cansat' => (int) 8, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 9, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 8, 'cpa' => (int) 10, 'csa' => (int) 7, 'camsi' => (int) 20, 'dca' => (int) 8, 'din' => (int) 12, 'dzi' => (int) 14, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 6, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 38, 'gra' => (int) 16, 'vvi' => (int) 8, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 5, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 11, 'lja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 11, 'mpo' => (int) 3, 'mbi' => (int) 14, 'mdo' => (int) 14, 'mtr' => (int) 8, 'cme' => (int) 9, 'egut' => (int) 9, 'ama' => (int) 11, 'nta' => (int) 17, 'nnu' => (int) 11, 'oeu' => (int) 18, 'osa' => (int) 8, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 6, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 9, 'rsi' => (int) 9, 'sbr' => (int) 10, 'sbo' => (int) 8, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 10, 'sas' => (int) 10, 'shi' => (int) 6, 'smo' => (int) 7, 'sly' => (int) 14, 'spe' => (int) 10, 'spa' => (int) 8, 'tar' => (int) 19, 'tha' => (int) 10, 'tca' => (int) 8, 'esa' => (int) 8, 'tpr' => (int) 11, 'twi' => (int) 13, 'ugi' => (int) 9, 'vma' => (int) 8, 'vmu' => (int) 10, 'zma' => (int) 15 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb353780' $species_info = array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ) $local_species = 'han' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000499', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1066', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p29780' => 'bna', 'A02p33180' => 'bna', 'A03p16470' => 'bna', 'A03p66010' => 'bna', 'A04p25970' => 'bna', 'A06p01270' => 'bna', 'A06p46080' => 'bna', 'A07p11400' => 'bna', 'A08p01840' => 'bna', 'A08p08230' => 'bna', 'A08p25740' => 'bna', 'A09p32070' => 'bna', 'A09p37830' => 'bna', 'A09p42840' => 'bna', 'A09p42850' => 'bna', 'Aa31LG10G2060' => 'aar', 'Aa31LG2G7410' => 'aar', 'Aa31LG6G10200' => 'aar', 'Aa31LG6G16680' => 'aar', 'Aa31LG6G8470' => 'aar', 'Aa31LG9G12730' => 'aar', 'Aa31LG9G13680' => 'aar', 'Aa31LG9G14920' => 'aar', 'Aa31LG9G6650' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4977' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5467' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3254' => 'aag', 'Actinidia02578' => 'ach', 'Actinidia07693' => 'ach', 'Actinidia08413' => 'ach', 'Actinidia08414' => 'ach', 'Actinidia15289' => 'ach', 'Actinidia19871' => 'ach', 'Actinidia21475' => 'ach', 'Actinidia22576' => 'ach', 'Actinidia28327' => 'ach', 'Actinidia32491' => 'ach', 'Actinidia39463' => 'ach', 'Actinidia39571' => 'ach', 'Ah.01g013750' => 'amhyb', 'Ah.01g023210' => 'amhyb', 'Ah.04g164850' => 'amhyb', 'Ah.05g178060' => 'amhyb', 'Ah.07g204270' => 'amhyb', 'Ah.07g208480' => 'amhyb', 'Ah.09g237410' => 'amhyb', 'Ah.14g089460' => 'amhyb', 'AL1G41790' => 'aly', 'AL1G49050' => 'aly', 'AL1G53810' => 'aly', 'AL1G61400' => 'aly', 'AL4G18580' => 'aly', 'AL5G12510' => 'aly', 'AL5G12540' => 'aly', 'AL6G43230' => 'aly', 'AL7G10370' => 'aly', 'AL7G19250' => 'aly', 'AL8G12240' => 'aly', 'AL8G18540' => 'aly', 'Aqoxy1G02409' => 'aox', 'Aqoxy2G03993' => 'aox', 'Aqoxy3G03357' => 'aox', 'Aqoxy4G00785' => 'aox', 'Aqoxy5G02598' => 'aox', 'Aqoxy6G00132' => 'aox', 'Aqoxy7G01776' => 'aox', 'Aqoxy7G02316' => 'aox', 'Aqoxy7G03973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.12AFKW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B8730' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27IQR1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3F75VG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3RE0GA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41TCQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.527VTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FIR39' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5W8UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DA38EV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ63HS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H1I32C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HC27T5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4M8AP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7N3CZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9UVDZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LS1NQA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT1D4B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SKC4TM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCFV76' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF9Q1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQWD9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1ZM88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WE07RT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YCK7VH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJE6Q6' => 'arhy', 'AT1G28240' => 'ath', 'AT1G34550' => 'ath', 'AT1G53040' => 'ath', 'AT2G02910' => 'ath', 'AT4G09630' => 'ath', 'AT4G38500' => 'ath', 'AT5G42660' => 'ath', 'AT5G46220' => 'ath', 'ATR0152G026' => 'atr', 'ATR0564G343' => 'atr', 'ATR0706G151' => 'atr', 'ATR0733G207' => 'atr', 'ATR0751G234' => 'atr', 'ATR0807G048' => 'atr', 'ATR1091G084' => 'atr', 'Atru.chr10.1229' => 'acertr', 'Atru.chr10.1230' => 'acertr', 'Atru.chr10.1874' => 'acertr', 'Atru.chr11.1808' => 'acertr', 'Atru.chr13.1795' => 'acertr', 'Atru.chr13.570' => 'acertr', 'Atru.chr2.2608' => 'acertr', 'Atru.chr2.2609' => 'acertr', 'Atru.chr5.3428' => 'acertr', 'Atru.chr8.1171' => 'acertr', 'AUR62004651' => 'cqu', 'AUR62008675' => 'cqu', 'AUR62010014' => 'cqu', 'AUR62013004' => 'cqu', 'AUR62014825' => 'cqu', 'AUR62015015' => 'cqu', 'AUR62015151' => 'cqu', 'AUR62017020' => 'cqu', 'AUR62019422' => 'cqu', 'AUR62023570' => 'cqu', 'AUR62025571' => 'cqu', 'AUR62029098' => 'cqu', 'AUR62033863' => 'cqu', 'AUR62034296' => 'cqu', 'AUR62040075' => 'cqu', 'BcaB02g07334' => 'bca', 'BcaB02g10575' => 'bca', 'BcaB03g12119' => 'bca', 'BcaB03g12120' => 'bca', 'BcaB03g13945' => 'bca', 'BcaB04g17123' => 'bca', 'BcaB04g17867' => 'bca', 'BcaB04g19839' => 'bca', 'BcaB07g30317' => 'bca', 'BcaB07g32432' => 'bca', 'BcaB07g33362' => 'bca', 'BcaB08g36611' => 'bca', 'BcaC01g00028' => 'bca', 'BcaC01g01356' => 'bca', 'BcaC01g02034' => 'bca', 'BcaC01g06051' => 'bca', 'BcaC03g16839' => 'bca', 'BcaC03g17176' => 'bca', 'BcaC05g26829' => 'bca', 'BcaC06g31490' => 'bca', 'BcaC06g35344' => 'bca', 'BcaC06g36570' => 'bca', 'BcaC07g37537' => 'bca', 'BcaC08g43491' => 'bca', 'BcaC08g43773' => 'bca', 'BcaNung00234' => 'bca', 'BcaNung01982' => 'bca', 'BcaNung03707' => 'bca', 'BcaNung06454' => 'bca', 'BolC2t10762H' => 'bol', 'BolC2t11191H' => 'bol', 'BolC3t14322H' => 'bol', 'BolC3t19747H' => 'bol', 'BolC3t21425H' => 'bol', 'BolC4t27800H' => 'bol', 'BolC5t31423H' => 'bol', 'BolC6t35951H' => 'bol', 'BolC6t36282H' => 'bol', 'BolC7t40678H' => 'bol', 'BolC7t40679H' => 'bol', 'BolC7t42222H' => 'bol', 'BolC7t43492H' => 'bol', 'BolC7t46785H' => 'bol', 'BolC8t47853H' => 'bol', 'BolC9t56805H' => 'bol', 'BraA02t08000Z' => 'bra', 'BraA02t08341Z' => 'bra', 'BraA03t10936Z' => 'bra', 'BraA03t15657Z' => 'bra', 'BraA04t18100Z' => 'bra', 'BraA05t20523Z' => 'bra', 'BraA06t23353Z' => 'bra', 'BraA06t27473Z' => 'bra', 'BraA06t27769Z' => 'bra', 'BraA07t28928Z' => 'bra', 'BraA08t32236Z' => 'bra', 'BraA08t32841Z' => 'bra', 'BraA08t34524Z' => 'bra', 'BraA09t38742Z' => 'bra', 'BraA09t39295Z' => 'bra', 'C02p47180' => 'bna', 'C02p50990' => 'bna', 'C03p19360' => 'bna', 'C03p74950' => 'bna', 'C03p91000' => 'bna', 'C04p63260' => 'bna', 'C05p27050' => 'bna', 'C06p08750' => 'bna', 'C06p11490' => 'bna', 'C07p02820' => 'bna', 'C07p17180' => 'bna', 'C07p29440' => 'bna', 'C07p63730' => 'bna', 'C09p39260' => 'bna', 'CAN.G1164.34' => 'can', 'CAN.G1164.39' => 'can', 'CAN.G1530.3' => 'can', 'CAN.G162.61' => 'can', 'CAN.G176.6' => 'can', 'CAN.G289.49' => 'can', 'CAN.G370.21' => 'can', 'CAN.G370.22' => 'can', 'CAN.G371.117' => 'can', 'CAN.G58.37' => 'can', 'CAN.G588.98' => 'can', 'CANSAT21G2266' => 'cansat', 'CANSAT25G2799' => 'cansat', 'CANSAT35G0862' => 'cansat', 'CANSAT35G1704' => 'cansat', 'CANSAT35G1760' => 'cansat', 'CANSAT56G3971' => 'cansat', 'CANSAT56G4116' => 'cansat', 'CANSAT80G1259' => 'cansat', 'CARHR027730' => 'chi', 'CARHR033880' => 'chi', 'CARHR043270' => 'chi', 'CARHR145330' => 'chi', 'CARHR145340' => 'chi', 'CARHR175570' => 'chi', 'CARHR181570' => 'chi', 'CARHR258470' => 'chi', 'CARHR260490' => 'chi', 'CARHR294220' => 'chi', 'Carub.0001s2668' => 'cru', 'Carub.0001s3257' => 'cru', 'Carub.0001s4220' => 'cru', 'Carub.0005s0179' => 'cru', 'Carub.0006s2807' => 'cru', 'Carub.0007s0039' => 'cru', 'Carub.0008s0169' => 'cru', 'Carub.0008s0636' => 'cru', 'Ca_00338_v3' => 'car', 'Ca_00542_v3' => 'car', 'Ca_01844_v3' => 'car', 'Ca_10611_v3' => 'car', 'Ca_13326_v3' => 'car', 'Ca_17944_v3' => 'car', 'Ca_18546_v3' => 'car', 'Ca_24219_v3' => 'car', 'Ca_29972_v3' => 'car', 'CBR_g3681' => 'cbr', 'CBR_g40021' => 'cbr', 'Cc01_g08140' => 'ccan', 'Cc02_g13410' => 'ccan', 'Cc02_g37480' => 'ccan', 'Cc05_g12030' => 'ccan', 'Cc09_g03370' => 'ccan', 'Cc09_g10300' => 'ccan', 'Cc10_g03530' => 'ccan', 'Cc10_g11380' => 'ccan', 'CDE01G0176' => 'cde', 'CDE02G0675' => 'cde', 'CDE02G0942' => 'cde', 'CDE02G1153' => 'cde', 'CDE02G4177' => 'cde', 'CDE04G2117' => 'cde', 'CDE04G2736' => 'cde', 'CDE08G1161' => 'cde', 'CDE09G1238' => 'cde', 'Cfa000467' => 'cfa', 'Cfa000947' => 'cfa', 'Cfa004969' => 'cfa', 'Cfa005284' => 'cfa', 'Cfa008993' => 'cfa', 'Cfa018187' => 'cfa', 'Cfa018454' => 'cfa', 'Cfa020585' => 'cfa', 'Ciclev10000424m.g' => 'ccl', 'Ciclev10003605m.g' => 'ccl', 'Ciclev10007828m.g' => 'ccl', 'Ciclev10014620m.g' => 'ccl', 'Ciclev10015169m.g' => 'ccl', 'Ciclev10018291m.g' => 'ccl', 'Ciclev10028256m.g' => 'ccl', 'Ciclev10033822m.g' => 'ccl', 'CiPaw.05G060300' => 'cil', 'CiPaw.05G085000' => 'cil', 'CiPaw.06G083700' => 'cil', 'CiPaw.06G120300' => 'cil', 'CiPaw.09G060500' => 'cil', 'CiPaw.09G123800' => 'cil', 'CiPaw.11G169700' => 'cil', 'CiPaw.12G118300' => 'cil', 'CiPaw.15G071000' => 'cil', 'CiPaw.15G081900' => 'cil', 'ClCG01G024610' => 'cla', 'ClCG03G006070' => 'cla', 'ClCG05G019250' => 'cla', 'ClCG09G009500' => 'cla', 'ClCG11G008200' => 'cla', 'ClCG11G018080' => 'cla', 'COL.COLO4_17373' => 'col', 'COL.COLO4_22994' => 'col', 'COL.COLO4_26389' => 'col', 'COL.COLO4_27170' => 'col', 'COL.COLO4_31074' => 'col', 'COL.COLO4_31465' => 'col', 'COL.COLO4_36438' => 'col', 'COL.COLO4_36439' => 'col', 'Cpa.g.c38781' => 'cpa', 'Cpa.g.sc128.12' => 'cpa', 'Cpa.g.sc166.7' => 'cpa', 'Cpa.g.sc166.8' => 'cpa', 'Cpa.g.sc20.111' => 'cpa', 'Cpa.g.sc27.31' => 'cpa', 'Cpa.g.sc64.36' => 'cpa', 'Cpa.g.sc64.37' => 'cpa', 'Cpa.g.sc66.49' => 'cpa', 'Cpa.g.sc80.64' => 'cpa', 'CsaV3_1G012320' => 'csa', 'CsaV3_2G008480' => 'csa', 'CsaV3_2G033450' => 'csa', 'CsaV3_3G044830' => 'csa', 'CsaV3_4G033710' => 'csa', 'CsaV3_6G051730' => 'csa', 'CsaV3_7G025350' => 'csa', 'CSS0001067' => 'camsi', 'CSS0005996' => 'camsi', 'CSS0006590' => 'camsi', 'CSS0009673' => 'camsi', 'CSS0010201' => 'camsi', 'CSS0010549' => 'camsi', 'CSS0011364' => 'camsi', 'CSS0014473' => 'camsi', 'CSS0014961' => 'camsi', 'CSS0020191' => 'camsi', 'CSS0021165' => 'camsi', 'CSS0022306' => 'camsi', 'CSS0030591' => 'camsi', 'CSS0030696' => 'camsi', 'CSS0032653' => 'camsi', 'CSS0037487' => 'camsi', 'CSS0041102' => 'camsi', 'CSS0041261' => 'camsi', 'CSS0046246' => 'camsi', 'CSS0049256' => 'camsi', 'DCAR_004075' => 'dca', 'DCAR_011538' => 'dca', 'DCAR_019553' => 'dca', 'DCAR_020952' => 'dca', 'DCAR_021739' => 'dca', 'DCAR_027407' => 'dca', 'DCAR_027913' => 'dca', 'DCAR_028066' => 'dca', 'Dinv05899' => 'din', 'Dinv07563' => 'din', 'Dinv08010' => 'din', 'Dinv14125' => 'din', 'Dinv20172' => 'din', 'Dinv30743' => 'din', 'Dinv31229' => 'din', 'Dinv34162' => 'din', 'Dinv36028' => 'din', 'Dinv39368' => 'din', 'Dinv40565' => 'din', 'Dinv41706' => 'din', 'Duzib052G0089' => 'dzi', 'Duzib116G0641' => 'dzi', 'Duzib132G0069' => 'dzi', 'Duzib132G1219' => 'dzi', 'Duzib147G0278' => 'dzi', 'Duzib160G0480' => 'dzi', 'Duzib170G0661' => 'dzi', 'Duzib177G0591' => 'dzi', 'Duzib187G1353' => 'dzi', 'Duzib192G0858' => 'dzi', 'Duzib192G0883' => 'dzi', 'Duzib213G0506' => 'dzi', 'Duzib235G0289' => 'dzi', 'Duzib251G0422' => 'dzi', 'ECA232G3898' => 'eca', 'ECA233G5950' => 'eca', 'ECA234G1699' => 'eca', 'ECA234G2421' => 'eca', 'ECA236G0426' => 'eca', 'ECA236G4331' => 'eca', 'ECA248G2573' => 'eca', 'EL10Ac1g00077' => 'bvu', 'EL10Ac1g01746' => 'bvu', 'EL10Ac2g03464' => 'bvu', 'EL10Ac4g08176' => 'bvu', 'EL10Ac7g17521' => 'bvu', 'EL10Ac8g20386' => 'bvu', 'EL10Ac9g21343' => 'bvu', 'EL10Ac9g22688' => 'bvu', 'Eucgr.B03434' => 'egr', 'Eucgr.D00618' => 'egr', 'Eucgr.E02395' => 'egr', 'Eucgr.F01129' => 'egr', 'Eucgr.F02622' => 'egr', 'Eucgr.F04207' => 'egr', 'FAN01G0570' => 'fan', 'FAN03G3351' => 'fan', 'FAN06G3702' => 'fan', 'FAN07G2149' => 'fan', 'FAN10G3758' => 'fan', 'FAN11G1170' => 'fan', 'FAN11G2050' => 'fan', 'FAN11G2724' => 'fan', 'FAN12G1700' => 'fan', 'FAN12G2028' => 'fan', 'FAN15G1160' => 'fan', 'FAN15G3063' => 'fan', 'FAN16G2540' => 'fan', 'FAN16G3077' => 'fan', 'FAN16G3624' => 'fan', 'FAN17G0221' => 'fan', 'FAN20G2492' => 'fan', 'FAN20G2905' => 'fan', 'FAN21G0548' => 'fan', 'FAN21G1300' => 'fan', 'FAN22G0077' => 'fan', 'FAN22G1315' => 'fan', 'FAN24G1280' => 'fan', 'FAN24G1445' => 'fan', 'FAN24G3527' => 'fan', 'FAN25G0464' => 'fan', 'FAN25G2885' => 'fan', 'FAN25G3270' => 'fan', 'FAN27G1101' => 'fan', 'FAN27G2846' => 'fan', 'FAN27G3524' => 'fan', 'FvH4_2g11770' => 'fve', 'FvH4_2g15630' => 'fve', 'FvH4_3g05570' => 'fve', 'FvH4_3g09110' => 'fve', 'FvH4_3g19940' => 'fve', 'FvH4_4g04821' => 'fve', 'FvH4_4g31480' => 'fve', 'FvH4_7g01740' => 'fve', 'Glyma.05G130400' => 'gma', 'Glyma.05G156400' => 'gma', 'Glyma.07G197000' => 'gma', 'Glyma.08G085151' => 'gma', 'Glyma.08G114500' => 'gma', 'Glyma.08G300400' => 'gma', 'Glyma.10G215800' => 'gma', 'Glyma.12G224400' => 'gma', 'Glyma.13G179300' => 'gma', 'Glyma.13G218151' => 'gma', 'Glyma.13G238800' => 'gma', 'Glyma.13G276900' => 'gma', 'Glyma.14G078200' => 'gma', 'Glyma.15G074500' => 'gma', 'Glyma.15G094100' => 'gma', 'Glyma.17G247200' => 'gma', 'Glyma.18G120100' => 'gma', 'Glyma.20G176000' => 'gma', 'Gohir.A01G063600' => 'ghi', 'Gohir.A01G170301' => 'ghi', 'Gohir.A02G060500' => 'ghi', 'Gohir.A05G133850' => 'ghi', 'Gohir.A05G161400' => 'ghi', 'Gohir.A06G012900' => 'ghi', 'Gohir.A06G035901' => 'ghi', 'Gohir.A06G127100' => 'ghi', 'Gohir.A06G210500' => 'ghi', 'Gohir.A08G008650' => 'ghi', 'Gohir.A09G072700' => 'ghi', 'Gohir.A09G088301' => 'ghi', 'Gohir.A10G040600' => 'ghi', 'Gohir.A12G036300' => 'ghi', 'Gohir.A12G143350' => 'ghi', 'Gohir.A12G165500' => 'ghi', 'Gohir.A13G145700' => 'ghi', 'Gohir.D01G050000' => 'ghi', 'Gohir.D01G051366' => 'ghi', 'Gohir.D01G161350' => 'ghi', 'Gohir.D02G065900' => 'ghi', 'Gohir.D05G164200' => 'ghi', 'Gohir.D05G355500' => 'ghi', 'Gohir.D06G010400' => 'ghi', 'Gohir.D06G111250' => 'ghi', 'Gohir.D06G132000' => 'ghi', 'Gohir.D06G210500' => 'ghi', 'Gohir.D07G165675' => 'ghi', 'Gohir.D08G062240' => 'ghi', 'Gohir.D08G086101' => 'ghi', 'Gohir.D08G138060' => 'ghi', 'Gohir.D09G072300' => 'ghi', 'Gohir.D10G041400' => 'ghi', 'Gohir.D11G191020' => 'ghi', 'Gohir.D11G212066' => 'ghi', 'Gohir.D12G036300' => 'ghi', 'Gohir.D12G168600' => 'ghi', 'Gohir.D13G150600' => 'ghi', 'Gorai.001G057300' => 'gra', 'Gorai.002G069900' => 'gra', 'Gorai.002G200000' => 'gra', 'Gorai.003G067600' => 'gra', 'Gorai.005G074800' => 'gra', 'Gorai.006G087300' => 'gra', 'Gorai.008G037500' => 'gra', 'Gorai.008G181400' => 'gra', 'Gorai.009G169400' => 'gra', 'Gorai.009G387900' => 'gra', 'Gorai.010G013300' => 'gra', 'Gorai.010G153800' => 'gra', 'Gorai.010G255800' => 'gra', 'Gorai.011G043700' => 'gra', 'Gorai.011G198900' => 'gra', 'Gorai.013G168400' => 'gra', 'GSVIVG01005212001' => 'vvi', 'GSVIVG01006163001' => 'vvi', 'GSVIVG01009625001' => 'vvi', 'GSVIVG01014338001' => 'vvi', 'GSVIVG01020005001' => 'vvi', 'GSVIVG01021450001' => 'vvi', 'GSVIVG01023975001' => 'vvi', 'GSVIVG01034490001' => 'vvi', 'HanXRQChr04g0112071' => 'han', 'HanXRQChr05g0131151' => 'han', 'HanXRQChr09g0262371' => 'han', 'HanXRQChr09g0268401' => 'han', 'HanXRQChr10g0279241' => 'han', 'HanXRQChr10g0297961' => 'han', 'HanXRQChr11g0326231' => 'han', 'HanXRQChr11g0328471' => 'han', 'HanXRQChr16g0507941' => 'han', 'HanXRQChr17g0560211' => 'han', 'Haze_02108' => 'cav', 'Haze_02428' => 'cav', 'Haze_05593' => 'cav', 'Haze_06448' => 'cav', 'Haze_09427' => 'cav', 'Haze_12022' => 'cav', 'Haze_17612' => 'cav', 'Haze_17928' => 'cav', 'Hma1.2p1_0032F.1_g019250' => 'hma', 'Hma1.2p1_0163F.1_g072690' => 'hma', 'Hma1.2p1_0265F.1_g106710' => 'hma', 'Hma1.2p1_0286F.1_g113970' => 'hma', 'Hma1.2p1_0363F.1_g136640' => 'hma', 'Hma1.2p1_0584F.1_g183470' => 'hma', 'Hma1.2p1_0885F.1_g232570' => 'hma', 'HPP92_006022' => 'vpl', 'HPP92_007320' => 'vpl', 'HPP92_011521' => 'vpl', 'HPP92_019387' => 'vpl', 'HPP92_024038' => 'vpl', 'Hund05891' => 'sun', 'Hund06450' => 'sun', 'Hund12053' => 'sun', 'Hund16800' => 'sun', 'Hund21222' => 'sun', 'Hund22896' => 'sun', 'Hund23746' => 'sun', 'Hund27083' => 'sun', 'Lalb_Chr02g0141831' => 'lal', 'Lalb_Chr02g0141841' => 'lal', 'Lalb_Chr05g0220411' => 'lal', 'Lalb_Chr06g0162081' => 'lal', 'Lalb_Chr09g0327651' => 'lal', 'Lalb_Chr13g0295051' => 'lal', 'Lalb_Chr15g0086801' => 'lal', 'Lalb_Chr16g0383781' => 'lal', 'Lalb_Chr16g0383791' => 'lal', 'Lalb_Chr18g0055441' => 'lal', 'Lalb_Chr18g0059611' => 'lal', 'Lalb_Chr20g0109661' => 'lal', 'Lalb_Chr20g0109831' => 'lal', 'Lalb_Chr20g0121871' => 'lal', 'Lalb_Chr22g0355361' => 'lal', 'Lalb_Chr25g0286371' => 'lal', 'Lj1A1187G43' => 'lonja', 'Lj1A1205T50' => 'lonja', 'Lj1A800G33' => 'lonja', 'Lj1C1187T7' => 'lonja', 'Lj1C843T11' => 'lonja', 'Lj1g0010940' => 'lja', 'Lj2A288T69' => 'lonja', 'Lj3g0024276' => 'lja', 'Lj4A47T76' => 'lonja', 'Lj4g0005805' => 'lja', 'Lj4g0006097' => 'lja', 'Lj4g0008528' => 'lja', 'Lj4g0024907' => 'lja', 'Lj5g0012472' => 'lja', 'Lj5g0018648' => 'lja', 'Lj6C789G1' => 'lonja', 'Lj6g0004000' => 'lja', 'Lj7A292G67' => 'lonja', 'Lj7A292T64' => 'lonja', 'Lj9A400T58' => 'lonja', 'Lsat_1_v5_gn_1_126181' => 'lsa', 'Lsat_1_v5_gn_4_123041' => 'lsa', 'Lsat_1_v5_gn_4_133620' => 'lsa', 'Lsat_1_v5_gn_4_53221' => 'lsa', 'Lsat_1_v5_gn_4_71961' => 'lsa', 'Lsat_1_v5_gn_7_105241' => 'lsa', 'Lsat_1_v5_gn_7_21361' => 'lsa', 'Lsat_1_v5_gn_7_28860' => 'lsa', 'Lsat_1_v5_gn_7_31260' => 'lsa', 'Lsat_1_v5_gn_8_52801' => 'lsa', 'Manes.02G191400' => 'mes', 'Manes.03G110100' => 'mes', 'Manes.04G071100' => 'mes', 'Manes.05G100500' => 'mes', 'Manes.05G164700' => 'mes', 'Manes.15G087000' => 'mes', 'Manes.15G121500' => 'mes', 'Manes.16G028300' => 'mes', 'Manes.17G046100' => 'mes', 'Manes.17G069800' => 'mes', 'Manes.18G100500' => 'mes', 'Mapoly0002s0109' => 'mpo', 'Mapoly0024s0007' => 'mpo', 'Mapoly0089s0032' => 'mpo', 'MBI04_g42241_MAGBIO' => 'mbi', 'MBI05_g11988_MAGBIO' => 'mbi', 'MBI05_g35452_MAGBIO' => 'mbi', 'MBI07_g30179_MAGBIO' => 'mbi', 'MBI07_g35859_MAGBIO' => 'mbi', 'MBI07_g35860_MAGBIO' => 'mbi', 'MBI07_g37166_MAGBIO' => 'mbi', 'MBI08_g18172_MAGBIO' => 'mbi', 'MBI09_g08441_MAGBIO' => 'mbi', 'MBI13_g01676_MAGBIO' => 'mbi', 'MBI14_g42955_MAGBIO' => 'mbi', 'MBI16_g13161_MAGBIO' => 'mbi', 'MBI17_g27204_MAGBIO' => 'mbi', 'MBI19_g21595_MAGBIO' => 'mbi', 'MD00G1148400' => 'mdo', 'MD02G1301200' => 'mdo', 'MD03G1227800' => 'mdo', 'MD05G1041100' => 'mdo', 'MD05G1124800' => 'mdo', 'MD05G1284000' => 'mdo', 'MD05G1338800' => 'mdo', 'MD05G1338900' => 'mdo', 'MD07G1022800' => 'mdo', 'MD10G1047500' => 'mdo', 'MD10G1127500' => 'mdo', 'MD10G1262300' => 'mdo', 'MD10G1293800' => 'mdo', 'MD16G1074300' => 'mdo', 'Medtr1g021670' => 'mtr', 'Medtr1g096320' => 'mtr', 'Medtr2g013690' => 'mtr', 'Medtr2g019450' => 'mtr', 'Medtr2g085170' => 'mtr', 'Medtr4g088785' => 'mtr', 'Medtr8g055930' => 'mtr', 'Medtr8g085850' => 'mtr', 'MELO3C002605.2' => 'cme', 'MELO3C003891.2' => 'cme', 'MELO3C004012.2' => 'cme', 'MELO3C007134.2' => 'cme', 'MELO3C008118.2' => 'cme', 'MELO3C016700.2' => 'cme', 'MELO3C024127.2' => 'cme', 'MELO3C033361.2' => 'cme', 'MELO3C033362.2' => 'cme', 'Migut.C00430' => 'egut', 'Migut.C01246' => 'egut', 'Migut.E00101' => 'egut', 'Migut.H01486' => 'egut', 'Migut.H01939' => 'egut', 'Migut.K00360' => 'egut', 'Migut.M00910' => 'egut', 'Migut.M01139' => 'egut', 'Migut.N02677' => 'egut', 'MSTRG.13252' => 'ama', 'MSTRG.14701' => 'ama', 'MSTRG.1521' => 'ama', 'MSTRG.15884' => 'ama', 'MSTRG.16242' => 'ama', 'MSTRG.22285' => 'ama', 'MSTRG.22444' => 'ama', 'MSTRG.2349' => 'ama', 'MSTRG.26308' => 'ama', 'MSTRG.28296' => 'ama', 'MSTRG.9895' => 'ama', 'Nitab4.5_0000110g0060' => 'nta', 'Nitab4.5_0000420g0130' => 'nta', 'Nitab4.5_0000422g0030' => 'nta', 'Nitab4.5_0000560g0180' => 'nta', 'Nitab4.5_0000703g0100' => 'nta', 'Nitab4.5_0000786g0200' => 'nta', 'Nitab4.5_0001336g0020' => 'nta', 'Nitab4.5_0001796g0030' => 'nta', 'Nitab4.5_0003348g0060' => 'nta', 'Nitab4.5_0003698g0040' => 'nta', 'Nitab4.5_0003942g0090' => 'nta', 'Nitab4.5_0004775g0070' => 'nta', 'Nitab4.5_0004864g0030' => 'nta', 'Nitab4.5_0005615g0020' => 'nta', 'Nitab4.5_0009288g0030' => 'nta', 'Nitab4.5_0009341g0010' => 'nta', 'Nitab4.5_0009535g0010' => 'nta', 'Nn1g03995' => 'nnu', 'Nn1g04100' => 'nnu', 'Nn1g06530' => 'nnu', 'Nn3g16404' => 'nnu', 'Nn3g17212' => 'nnu', 'Nn3g20776' => 'nnu', 'Nn3g21923' => 'nnu', 'Nn5g27737' => 'nnu', 'Nn5g29461' => 'nnu', 'Nn7g38355' => 'nnu', 'Nn8g39873' => 'nnu', 'Oeu000548.2' => 'oeu', 'Oeu004672.1' => 'oeu', 'Oeu015605.2' => 'oeu', 'Oeu016092.1' => 'oeu', 'Oeu017879.3' => 'oeu', 'Oeu024910.1' => 'oeu', 'Oeu028965.1' => 'oeu', 'Oeu031269.1' => 'oeu', 'Oeu031270.1' => 'oeu', 'Oeu032535.1' => 'oeu', 'Oeu034151.1' => 'oeu', 'Oeu034152.1' => 'oeu', 'Oeu034588.2' => 'oeu', 'Oeu050846.1' => 'oeu', 'Oeu050849.2' => 'oeu', 'Oeu051063.2' => 'oeu', 'Oeu052368.1' => 'oeu', 'Oeu052370.1' => 'oeu', 'Os01g0210400' => 'osa', 'Os01g0304300' => 'osa', 'Os01g0749100' => 'osa', 'Os02g0745800' => 'osa', 'Os03g0769050' => 'osa', 'Os05g0531500' => 'osa', 'Os06g0724300' => 'osa', 'Os11g0198100' => 'osa', 'Peaxi162Scf00069g01425' => 'pax', 'Peaxi162Scf00280g00811' => 'pax', 'Peaxi162Scf00310g00615' => 'pax', 'Peaxi162Scf00362g00542' => 'pax', 'Peaxi162Scf00461g00310' => 'pax', 'Peaxi162Scf00530g00118' => 'pax', 'Peaxi162Scf00541g00057' => 'pax', 'Peaxi162Scf00661g00017' => 'pax', 'Peaxi162Scf00926g00027' => 'pax', 'Peaxi162Scf01064g00263' => 'pax', 'Peaxi162Scf01211g00135' => 'pax', 'PGR004G2336' => 'pgr', 'PGR042G0327' => 'pgr', 'PGR042G1957' => 'pgr', 'PGR042G2003' => 'pgr', 'PGR042G3929' => 'pgr', 'PGR083G1137' => 'pgr', 'PGR083G1364' => 'pgr', 'PGSC0003DMG400003381' => 'stu', 'PGSC0003DMG400003417' => 'stu', 'PGSC0003DMG400008981' => 'stu', 'PGSC0003DMG400012417' => 'stu', 'PGSC0003DMG400012823' => 'stu', 'PGSC0003DMG400016885' => 'stu', 'PGSC0003DMG400022812' => 'stu', 'PGSC0003DMG400029726' => 'stu', 'PGSC0003DMG401009243' => 'stu', 'PGSC0003DMG401031505' => 'stu', 'PGSC0003DMG402031505' => 'stu', 'Phvul.001G017600' => 'pvu', 'Phvul.002G193500' => 'pvu', 'Phvul.002G228900' => 'pvu', 'Phvul.002G236800' => 'pvu', 'Phvul.003G049500' => 'pvu', 'Phvul.005G072000' => 'pvu', 'Phvul.006G164800' => 'pvu', 'Phvul.006G185100' => 'pvu', 'Phvul.007G090000' => 'pvu', 'Potri.001G399800' => 'ptr', 'Potri.002G149900' => 'ptr', 'Potri.004G044100' => 'ptr', 'Potri.004G177600' => 'ptr', 'Potri.009G138000' => 'ptr', 'Potri.010G094000' => 'ptr', 'Potri.011G053000' => 'ptr', 'Potri.011G119300' => 'ptr', 'Potri.013G113700' => 'ptr', 'Potri.018G107800' => 'ptr', 'Potri.019G084100' => 'ptr', 'Pp3c14_23720' => 'ppa', 'Pp3c16_6340' => 'ppa', 'Pp3c23_13420' => 'ppa', 'Pp3c24_2740' => 'ppa', 'Pp3c25_860' => 'ppa', 'Pp3c8_21750' => 'ppa', 'Prupe.1G273000' => 'ppe', 'Prupe.1G273700' => 'ppe', 'Prupe.1G274100' => 'ppe', 'Prupe.2G023300' => 'ppe', 'Prupe.4G048000' => 'ppe', 'Prupe.4G080400' => 'ppe', 'Prupe.4G181200' => 'ppe', 'Prupe.8G056900' => 'ppe', 'Prupe.8G168700' => 'ppe', 'Psat1g189080' => 'psa', 'Psat1g204760' => 'psa', 'Psat4g175560' => 'psa', 'Psat4g177720' => 'psa', 'Psat5g244240' => 'psa', 'Psat6g010720' => 'psa', 'Psat6g187200' => 'psa', 'Psat7g072040' => 'psa', 'PSO017G3501' => 'pso', 'PSO063G2148' => 'pso', 'PSO063G5608' => 'pso', 'PSO210G6392' => 'pso', 'PSO541G2319' => 'pso', 'PSO541G2836' => 'pso', 'PSO541G4012' => 'pso', 'PSO541G6253' => 'pso', 'PSO675G0580' => 'pso', 'PSO675G0856' => 'pso', 'PSO675G5635' => 'pso', 'PSO675G9157' => 'pso', 'PSO832G1660' => 'pso', 'PSO832G1969' => 'pso', 'QL02p007186' => 'qlo', 'QL02p033904' => 'qlo', 'QL03p064391' => 'qlo', 'QL05p040593' => 'qlo', 'QL05p058242' => 'qlo', 'QL08p021825' => 'qlo', 'QL11p004981' => 'qlo', 'RcHm_v2.0_Chr1g0318301' => 'rch', 'RcHm_v2.0_Chr4g0418501' => 'rch', 'RcHm_v2.0_Chr4g0439971' => 'rch', 'RcHm_v2.0_Chr5g0008541' => 'rch', 'RcHm_v2.0_Chr5g0014101' => 'rch', 'RcHm_v2.0_Chr5g0014131' => 'rch', 'RcHm_v2.0_Chr5g0033621' => 'rch', 'RcHm_v2.0_Chr6g0272041' => 'rch', 'RcHm_v2.0_Chr6g0278831' => 'rch', 'Rhsim02G0130400' => 'rsi', 'Rhsim02G0171100' => 'rsi', 'Rhsim05G0053000' => 'rsi', 'Rhsim05G0053100' => 'rsi', 'Rhsim06G0096500' => 'rsi', 'Rhsim06G0096600' => 'rsi', 'Rhsim06G0199100' => 'rsi', 'Rhsim12G0062300' => 'rsi', 'Rhsim12G0062800' => 'rsi', 'Sabra02G0118600' => 'sbr', 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'Solyc03g079860.2' => 'sly', 'Solyc04g079770.3' => 'sly', 'Solyc05g007430.4' => 'sly', 'Solyc07g063150.3' => 'sly', 'Solyc08g016620.3' => 'sly', 'Solyc09g057590.3' => 'sly', 'Solyc09g057600.1' => 'sly', 'Solyc10g009050.3' => 'sly', 'Solyc11g017420.2' => 'sly', 'Sopen01g053810' => 'spe', 'Sopen02g023040' => 'spe', 'Sopen03g002440' => 'spe', 'Sopen04g033350' => 'spe', 'Sopen05g003310' => 'spe', 'Sopen07g004050' => 'spe', 'Sopen07g031340' => 'spe', 'Sopen08g006990' => 'spe', 'Sopen10g004830' => 'spe', 'Sopen11g009370' => 'spe', 'Sp1g24450' => 'spa', 'Sp1g29670' => 'spa', 'Sp1g39600' => 'spa', 'Sp2g11080' => 'spa', 'Sp2g13970' => 'spa', 'Sp4g16130' => 'spa', 'Sp6g13080' => 'spa', 'Sp7g37270' => 'spa', 'TAR371G0065' => 'tar', 'TAR376G0340' => 'tar', 'TAR376G0435' => 'tar', 'TAR381G0002' => 'tar', 'TAR381G1236' => 'tar', 'TAR624G0055' => 'tar', 'TAR624G0324' => 'tar', 'TAR624G0696' => 'tar', 'TAR624G0906' => 'tar', 'TAR625G0107' => 'tar', 'TAR626G0015' => 'tar', 'TAR626G1356' => 'tar', 'TAR627G0888' => 'tar', 'TAR628G0399' => 'tar', 'TAR628G1327' => 'tar', 'TAR629G2831' => 'tar', 'TAR629G2874' => 'tar', 'TAR633G1432' => 'tar', 'TAR633G2771' => 'tar', 'THA.LOC104803394' => 'tha', 'THA.LOC104805153' => 'tha', 'THA.LOC104806784' => 'tha', 'THA.LOC104810473' => 'tha', 'THA.LOC104813100' => 'tha', 'THA.LOC104814215' => 'tha', 'THA.LOC104815554' => 'tha', 'THA.LOC104820544' => 'tha', 'THA.LOC104824754' => 'tha', 'THA.LOC104827717' => 'tha', 'Thecc.02G031400' => 'tca', 'Thecc.02G055900' => 'tca', 'Thecc.02G350800' => 'tca', 'Thecc.06G150900' => 'tca', 'Thecc.06G186600' => 'tca', 'Thecc.07G089600' => 'tca', 'Thecc.08G020400' => 'tca', 'Thecc.08G182100' => 'tca', 'Thhalv10000873m.g' => 'esa', 'Thhalv10004185m.g' => 'esa', 'Thhalv10006981m.g' => 'esa', 'Thhalv10007204m.g' => 'esa', 'Thhalv10011374m.g' => 'esa', 'Thhalv10013482m.g' => 'esa', 'Thhalv10017801m.g' => 'esa', 'Thhalv10024983m.g' => 'esa', 'TPR.G12072' => 'tpr', 'TPR.G15769' => 'tpr', 'TPR.G16504' => 'tpr', 'TPR.G16506' => 'tpr', 'TPR.G24345' => 'tpr', 'TPR.G26666' => 'tpr', 'TPR.G27320' => 'tpr', 'TPR.G31819' => 'tpr', 'TPR.G38879' => 'tpr', 'TPR.G39015' => 'tpr', 'TPR.G8819' => 'tpr', 'TWI09G0924' => 'twi', 'TWI12G0811' => 'twi', 'TWI12G1294' => 'twi', 'TWI31G0150' => 'twi', 'TWI36G1262' => 'twi', 'TWI38G1287' => 'twi', 'TWI38G1633' => 'twi', 'TWI38G1982' => 'twi', 'TWI39G0116' => 'twi', 'TWI60G1011' => 'twi', 'TWI63G0171' => 'twi', 'TWI73G0839' => 'twi', 'TWI79G1511' => 'twi', 'unitig_0.g915' => 'ugi', 'unitig_0.g916' => 'ugi', 'unitig_21.g20219' => 'ugi', 'unitig_21.g20416' => 'ugi', 'unitig_578.g16132' => 'ugi', 'unitig_578.g16718' => 'ugi', 'unitig_62.g23481' => 'ugi', 'unitig_744.g24535' => 'ugi', 'unitig_749.g13525' => 'ugi', 'vmacro01248' => 'vma', 'vmacro02290' => 'vma', 'vmacro10946' => 'vma', 'vmacro11865' => 'vma', 'vmacro12493' => 'vma', 'vmacro17322' => 'vma', 'vmacro21599' => 'vma', 'vmacro23041' => 'vma', 'VMungo0251G0004' => 'vmu', 'VMungo0251G2639' => 'vmu', 'VMungo0251G2967' => 'vmu', 'VMungo0540G0864' => 'vmu', 'VMungo0540G1569' => 'vmu', 'VMungo0647G0317' => 'vmu', 'VMungo0720G1373' => 'vmu', 'VMungo0720G1508' => 'vmu', 'VMungo1080G0485' => 'vmu', 'VMungo1215G3177' => 'vmu', 'Zm00001eb112600' => 'zma', 'Zm00001eb120220' => 'zma', 'Zm00001eb153240' => 'zma', 'Zm00001eb168880' => 'zma', 'Zm00001eb213920' => 'zma', 'Zm00001eb228280' => 'zma', 'Zm00001eb254580' => 'zma', 'Zm00001eb272180' => 'zma', 'Zm00001eb293190' => 'zma', 'Zm00001eb322930' => 'zma', 'Zm00001eb353360' => 'zma', 'Zm00001eb353390' => 'zma', 'Zm00001eb353430' => 'zma', 'Zm00001eb353440' => 'zma', 'Zm00001eb353780' => 'zma' ), 'gf_id' => 'HOM05D000499', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000499' ), 'data_identifier' => 'HOM05D000499', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000499', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1066', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p29780' => 'bna', 'A02p33180' => 'bna', 'A03p16470' => 'bna', 'A03p66010' => 'bna', 'A04p25970' => 'bna', 'A06p01270' => 'bna', 'A06p46080' => 'bna', 'A07p11400' => 'bna', 'A08p01840' => 'bna', 'A08p08230' => 'bna', 'A08p25740' => 'bna', 'A09p32070' => 'bna', 'A09p37830' => 'bna', 'A09p42840' => 'bna', 'A09p42850' => 'bna', 'Aa31LG10G2060' => 'aar', 'Aa31LG2G7410' => 'aar', 'Aa31LG6G10200' => 'aar', 'Aa31LG6G16680' => 'aar', 'Aa31LG6G8470' => 'aar', 'Aa31LG9G12730' => 'aar', 'Aa31LG9G13680' => 'aar', 'Aa31LG9G14920' => 'aar', 'Aa31LG9G6650' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4977' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5467' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3254' => 'aag', 'Actinidia02578' => 'ach', 'Actinidia07693' => 'ach', 'Actinidia08413' => 'ach', 'Actinidia08414' => 'ach', 'Actinidia15289' => 'ach', 'Actinidia19871' => 'ach', 'Actinidia21475' => 'ach', 'Actinidia22576' => 'ach', 'Actinidia28327' => 'ach', 'Actinidia32491' => 'ach', 'Actinidia39463' => 'ach', 'Actinidia39571' => 'ach', 'Ah.01g013750' => 'amhyb', 'Ah.01g023210' => 'amhyb', 'Ah.04g164850' => 'amhyb', 'Ah.05g178060' => 'amhyb', 'Ah.07g204270' => 'amhyb', 'Ah.07g208480' => 'amhyb', 'Ah.09g237410' => 'amhyb', 'Ah.14g089460' => 'amhyb', 'AL1G41790' => 'aly', 'AL1G49050' => 'aly', 'AL1G53810' => 'aly', 'AL1G61400' => 'aly', 'AL4G18580' => 'aly', 'AL5G12510' => 'aly', 'AL5G12540' => 'aly', 'AL6G43230' => 'aly', 'AL7G10370' => 'aly', 'AL7G19250' => 'aly', 'AL8G12240' => 'aly', 'AL8G18540' => 'aly', 'Aqoxy1G02409' => 'aox', 'Aqoxy2G03993' => 'aox', 'Aqoxy3G03357' => 'aox', 'Aqoxy4G00785' => 'aox', 'Aqoxy5G02598' => 'aox', 'Aqoxy6G00132' => 'aox', 'Aqoxy7G01776' => 'aox', 'Aqoxy7G02316' => 'aox', 'Aqoxy7G03973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.12AFKW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B8730' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27IQR1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3F75VG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3RE0GA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41TCQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.527VTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FIR39' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5W8UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DA38EV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ63HS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H1I32C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HC27T5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4M8AP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7N3CZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9UVDZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LS1NQA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT1D4B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SKC4TM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCFV76' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF9Q1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQWD9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1ZM88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WE07RT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YCK7VH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJE6Q6' => 'arhy', 'AT1G28240' => 'ath', 'AT1G34550' => 'ath', 'AT1G53040' => 'ath', 'AT2G02910' => 'ath', 'AT4G09630' => 'ath', 'AT4G38500' => 'ath', 'AT5G42660' => 'ath', 'AT5G46220' => 'ath', 'ATR0152G026' => 'atr', 'ATR0564G343' => 'atr', 'ATR0706G151' => 'atr', 'ATR0733G207' => 'atr', 'ATR0751G234' => 'atr', 'ATR0807G048' => 'atr', 'ATR1091G084' => 'atr', 'Atru.chr10.1229' => 'acertr', 'Atru.chr10.1230' => 'acertr', 'Atru.chr10.1874' => 'acertr', 'Atru.chr11.1808' => 'acertr', 'Atru.chr13.1795' => 'acertr', 'Atru.chr13.570' => 'acertr', 'Atru.chr2.2608' => 'acertr', 'Atru.chr2.2609' => 'acertr', 'Atru.chr5.3428' => 'acertr', 'Atru.chr8.1171' => 'acertr', 'AUR62004651' => 'cqu', 'AUR62008675' => 'cqu', 'AUR62010014' => 'cqu', 'AUR62013004' => 'cqu', 'AUR62014825' => 'cqu', 'AUR62015015' => 'cqu', 'AUR62015151' => 'cqu', 'AUR62017020' => 'cqu', 'AUR62019422' => 'cqu', 'AUR62023570' => 'cqu', 'AUR62025571' => 'cqu', 'AUR62029098' => 'cqu', 'AUR62033863' => 'cqu', 'AUR62034296' => 'cqu', 'AUR62040075' => 'cqu', 'BcaB02g07334' => 'bca', 'BcaB02g10575' => 'bca', 'BcaB03g12119' => 'bca', 'BcaB03g12120' => 'bca', 'BcaB03g13945' => 'bca', 'BcaB04g17123' => 'bca', 'BcaB04g17867' => 'bca', 'BcaB04g19839' => 'bca', 'BcaB07g30317' => 'bca', 'BcaB07g32432' => 'bca', 'BcaB07g33362' => 'bca', 'BcaB08g36611' => 'bca', 'BcaC01g00028' => 'bca', 'BcaC01g01356' => 'bca', 'BcaC01g02034' => 'bca', 'BcaC01g06051' => 'bca', 'BcaC03g16839' => 'bca', 'BcaC03g17176' => 'bca', 'BcaC05g26829' => 'bca', 'BcaC06g31490' => 'bca', 'BcaC06g35344' => 'bca', 'BcaC06g36570' => 'bca', 'BcaC07g37537' => 'bca', 'BcaC08g43491' => 'bca', 'BcaC08g43773' => 'bca', 'BcaNung00234' => 'bca', 'BcaNung01982' => 'bca', 'BcaNung03707' => 'bca', 'BcaNung06454' => 'bca', 'BolC2t10762H' => 'bol', 'BolC2t11191H' => 'bol', 'BolC3t14322H' => 'bol', 'BolC3t19747H' => 'bol', 'BolC3t21425H' => 'bol', 'BolC4t27800H' => 'bol', 'BolC5t31423H' => 'bol', 'BolC6t35951H' => 'bol', 'BolC6t36282H' => 'bol', 'BolC7t40678H' => 'bol', 'BolC7t40679H' => 'bol', 'BolC7t42222H' => 'bol', 'BolC7t43492H' => 'bol', 'BolC7t46785H' => 'bol', 'BolC8t47853H' => 'bol', 'BolC9t56805H' => 'bol', 'BraA02t08000Z' => 'bra', 'BraA02t08341Z' => 'bra', 'BraA03t10936Z' => 'bra', 'BraA03t15657Z' => 'bra', 'BraA04t18100Z' => 'bra', 'BraA05t20523Z' => 'bra', 'BraA06t23353Z' => 'bra', 'BraA06t27473Z' => 'bra', 'BraA06t27769Z' => 'bra', 'BraA07t28928Z' => 'bra', 'BraA08t32236Z' => 'bra', 'BraA08t32841Z' => 'bra', 'BraA08t34524Z' => 'bra', 'BraA09t38742Z' => 'bra', 'BraA09t39295Z' => 'bra', 'C02p47180' => 'bna', 'C02p50990' => 'bna', 'C03p19360' => 'bna', 'C03p74950' => 'bna', 'C03p91000' => 'bna', 'C04p63260' => 'bna', 'C05p27050' => 'bna', 'C06p08750' => 'bna', 'C06p11490' => 'bna', 'C07p02820' => 'bna', 'C07p17180' => 'bna', 'C07p29440' => 'bna', 'C07p63730' => 'bna', 'C09p39260' => 'bna', 'CAN.G1164.34' => 'can', 'CAN.G1164.39' => 'can', 'CAN.G1530.3' => 'can', 'CAN.G162.61' => 'can', 'CAN.G176.6' => 'can', 'CAN.G289.49' => 'can', 'CAN.G370.21' => 'can', 'CAN.G370.22' => 'can', 'CAN.G371.117' => 'can', 'CAN.G58.37' => 'can', 'CAN.G588.98' => 'can', 'CANSAT21G2266' => 'cansat', 'CANSAT25G2799' => 'cansat', 'CANSAT35G0862' => 'cansat', 'CANSAT35G1704' => 'cansat', 'CANSAT35G1760' => 'cansat', 'CANSAT56G3971' => 'cansat', 'CANSAT56G4116' => 'cansat', 'CANSAT80G1259' => 'cansat', 'CARHR027730' => 'chi', 'CARHR033880' => 'chi', 'CARHR043270' => 'chi', 'CARHR145330' => 'chi', 'CARHR145340' => 'chi', 'CARHR175570' => 'chi', 'CARHR181570' => 'chi', 'CARHR258470' => 'chi', 'CARHR260490' => 'chi', 'CARHR294220' => 'chi', 'Carub.0001s2668' => 'cru', 'Carub.0001s3257' => 'cru', 'Carub.0001s4220' => 'cru', 'Carub.0005s0179' => 'cru', 'Carub.0006s2807' => 'cru', 'Carub.0007s0039' => 'cru', 'Carub.0008s0169' => 'cru', 'Carub.0008s0636' => 'cru', 'Ca_00338_v3' => 'car', 'Ca_00542_v3' => 'car', 'Ca_01844_v3' => 'car', 'Ca_10611_v3' => 'car', 'Ca_13326_v3' => 'car', 'Ca_17944_v3' => 'car', 'Ca_18546_v3' => 'car', 'Ca_24219_v3' => 'car', 'Ca_29972_v3' => 'car', 'CBR_g3681' => 'cbr', 'CBR_g40021' => 'cbr', 'Cc01_g08140' => 'ccan', 'Cc02_g13410' => 'ccan', 'Cc02_g37480' => 'ccan', 'Cc05_g12030' => 'ccan', 'Cc09_g03370' => 'ccan', 'Cc09_g10300' => 'ccan', 'Cc10_g03530' => 'ccan', 'Cc10_g11380' => 'ccan', 'CDE01G0176' => 'cde', 'CDE02G0675' => 'cde', 'CDE02G0942' => 'cde', 'CDE02G1153' => 'cde', 'CDE02G4177' => 'cde', 'CDE04G2117' => 'cde', 'CDE04G2736' => 'cde', 'CDE08G1161' => 'cde', 'CDE09G1238' => 'cde', 'Cfa000467' => 'cfa', 'Cfa000947' => 'cfa', 'Cfa004969' => 'cfa', 'Cfa005284' => 'cfa', 'Cfa008993' => 'cfa', 'Cfa018187' => 'cfa', 'Cfa018454' => 'cfa', 'Cfa020585' => 'cfa', 'Ciclev10000424m.g' => 'ccl', 'Ciclev10003605m.g' => 'ccl', 'Ciclev10007828m.g' => 'ccl', 'Ciclev10014620m.g' => 'ccl', 'Ciclev10015169m.g' => 'ccl', 'Ciclev10018291m.g' => 'ccl', 'Ciclev10028256m.g' => 'ccl', 'Ciclev10033822m.g' => 'ccl', 'CiPaw.05G060300' => 'cil', 'CiPaw.05G085000' => 'cil', 'CiPaw.06G083700' => 'cil', 'CiPaw.06G120300' => 'cil', 'CiPaw.09G060500' => 'cil', 'CiPaw.09G123800' => 'cil', 'CiPaw.11G169700' => 'cil', 'CiPaw.12G118300' => 'cil', 'CiPaw.15G071000' => 'cil', 'CiPaw.15G081900' => 'cil', 'ClCG01G024610' => 'cla', 'ClCG03G006070' => 'cla', 'ClCG05G019250' => 'cla', 'ClCG09G009500' => 'cla', 'ClCG11G008200' => 'cla', 'ClCG11G018080' => 'cla', 'COL.COLO4_17373' => 'col', 'COL.COLO4_22994' => 'col', 'COL.COLO4_26389' => 'col', 'COL.COLO4_27170' => 'col', 'COL.COLO4_31074' => 'col', 'COL.COLO4_31465' => 'col', 'COL.COLO4_36438' => 'col', 'COL.COLO4_36439' => 'col', 'Cpa.g.c38781' => 'cpa', 'Cpa.g.sc128.12' => 'cpa', 'Cpa.g.sc166.7' => 'cpa', 'Cpa.g.sc166.8' => 'cpa', 'Cpa.g.sc20.111' => 'cpa', 'Cpa.g.sc27.31' => 'cpa', 'Cpa.g.sc64.36' => 'cpa', 'Cpa.g.sc64.37' => 'cpa', 'Cpa.g.sc66.49' => 'cpa', 'Cpa.g.sc80.64' => 'cpa', 'CsaV3_1G012320' => 'csa', 'CsaV3_2G008480' => 'csa', 'CsaV3_2G033450' => 'csa', 'CsaV3_3G044830' => 'csa', 'CsaV3_4G033710' => 'csa', 'CsaV3_6G051730' => 'csa', 'CsaV3_7G025350' => 'csa', 'CSS0001067' => 'camsi', 'CSS0005996' => 'camsi', 'CSS0006590' => 'camsi', 'CSS0009673' => 'camsi', 'CSS0010201' => 'camsi', 'CSS0010549' => 'camsi', 'CSS0011364' => 'camsi', 'CSS0014473' => 'camsi', 'CSS0014961' => 'camsi', 'CSS0020191' => 'camsi', 'CSS0021165' => 'camsi', 'CSS0022306' => 'camsi', 'CSS0030591' => 'camsi', 'CSS0030696' => 'camsi', 'CSS0032653' => 'camsi', 'CSS0037487' => 'camsi', 'CSS0041102' => 'camsi', 'CSS0041261' => 'camsi', 'CSS0046246' => 'camsi', 'CSS0049256' => 'camsi', 'DCAR_004075' => 'dca', 'DCAR_011538' => 'dca', 'DCAR_019553' => 'dca', 'DCAR_020952' => 'dca', 'DCAR_021739' => 'dca', 'DCAR_027407' => 'dca', 'DCAR_027913' => 'dca', 'DCAR_028066' => 'dca', 'Dinv05899' => 'din', 'Dinv07563' => 'din', 'Dinv08010' => 'din', 'Dinv14125' => 'din', 'Dinv20172' => 'din', 'Dinv30743' => 'din', 'Dinv31229' => 'din', 'Dinv34162' => 'din', 'Dinv36028' => 'din', 'Dinv39368' => 'din', 'Dinv40565' => 'din', 'Dinv41706' => 'din', 'Duzib052G0089' => 'dzi', 'Duzib116G0641' => 'dzi', 'Duzib132G0069' => 'dzi', 'Duzib132G1219' => 'dzi', 'Duzib147G0278' => 'dzi', 'Duzib160G0480' => 'dzi', 'Duzib170G0661' => 'dzi', 'Duzib177G0591' => 'dzi', 'Duzib187G1353' => 'dzi', 'Duzib192G0858' => 'dzi', 'Duzib192G0883' => 'dzi', 'Duzib213G0506' => 'dzi', 'Duzib235G0289' => 'dzi', 'Duzib251G0422' => 'dzi', 'ECA232G3898' => 'eca', 'ECA233G5950' => 'eca', 'ECA234G1699' => 'eca', 'ECA234G2421' => 'eca', 'ECA236G0426' => 'eca', 'ECA236G4331' => 'eca', 'ECA248G2573' => 'eca', 'EL10Ac1g00077' => 'bvu', 'EL10Ac1g01746' => 'bvu', 'EL10Ac2g03464' => 'bvu', 'EL10Ac4g08176' => 'bvu', 'EL10Ac7g17521' => 'bvu', 'EL10Ac8g20386' => 'bvu', 'EL10Ac9g21343' => 'bvu', 'EL10Ac9g22688' => 'bvu', 'Eucgr.B03434' => 'egr', 'Eucgr.D00618' => 'egr', 'Eucgr.E02395' => 'egr', 'Eucgr.F01129' => 'egr', 'Eucgr.F02622' => 'egr', 'Eucgr.F04207' => 'egr', 'FAN01G0570' => 'fan', 'FAN03G3351' => 'fan', 'FAN06G3702' => 'fan', 'FAN07G2149' => 'fan', 'FAN10G3758' => 'fan', 'FAN11G1170' => 'fan', 'FAN11G2050' => 'fan', 'FAN11G2724' => 'fan', 'FAN12G1700' => 'fan', 'FAN12G2028' => 'fan', 'FAN15G1160' => 'fan', 'FAN15G3063' => 'fan', 'FAN16G2540' => 'fan', 'FAN16G3077' => 'fan', 'FAN16G3624' => 'fan', 'FAN17G0221' => 'fan', 'FAN20G2492' => 'fan', 'FAN20G2905' => 'fan', 'FAN21G0548' => 'fan', 'FAN21G1300' => 'fan', 'FAN22G0077' => 'fan', 'FAN22G1315' => 'fan', 'FAN24G1280' => 'fan', 'FAN24G1445' => 'fan', 'FAN24G3527' => 'fan', 'FAN25G0464' => 'fan', 'FAN25G2885' => 'fan', 'FAN25G3270' => 'fan', 'FAN27G1101' => 'fan', 'FAN27G2846' => 'fan', 'FAN27G3524' => 'fan', 'FvH4_2g11770' => 'fve', 'FvH4_2g15630' => 'fve', 'FvH4_3g05570' => 'fve', 'FvH4_3g09110' => 'fve', 'FvH4_3g19940' => 'fve', 'FvH4_4g04821' => 'fve', 'FvH4_4g31480' => 'fve', 'FvH4_7g01740' => 'fve', 'Glyma.05G130400' => 'gma', 'Glyma.05G156400' => 'gma', 'Glyma.07G197000' => 'gma', 'Glyma.08G085151' => 'gma', 'Glyma.08G114500' => 'gma', 'Glyma.08G300400' => 'gma', 'Glyma.10G215800' => 'gma', 'Glyma.12G224400' => 'gma', 'Glyma.13G179300' => 'gma', 'Glyma.13G218151' => 'gma', 'Glyma.13G238800' => 'gma', 'Glyma.13G276900' => 'gma', 'Glyma.14G078200' => 'gma', 'Glyma.15G074500' => 'gma', 'Glyma.15G094100' => 'gma', 'Glyma.17G247200' => 'gma', 'Glyma.18G120100' => 'gma', 'Glyma.20G176000' => 'gma', 'Gohir.A01G063600' => 'ghi', 'Gohir.A01G170301' => 'ghi', 'Gohir.A02G060500' => 'ghi', 'Gohir.A05G133850' => 'ghi', 'Gohir.A05G161400' => 'ghi', 'Gohir.A06G012900' => 'ghi', 'Gohir.A06G035901' => 'ghi', 'Gohir.A06G127100' => 'ghi', 'Gohir.A06G210500' => 'ghi', 'Gohir.A08G008650' => 'ghi', 'Gohir.A09G072700' => 'ghi', 'Gohir.A09G088301' => 'ghi', 'Gohir.A10G040600' => 'ghi', 'Gohir.A12G036300' => 'ghi', 'Gohir.A12G143350' => 'ghi', 'Gohir.A12G165500' => 'ghi', 'Gohir.A13G145700' => 'ghi', 'Gohir.D01G050000' => 'ghi', 'Gohir.D01G051366' => 'ghi', 'Gohir.D01G161350' => 'ghi', 'Gohir.D02G065900' => 'ghi', 'Gohir.D05G164200' => 'ghi', 'Gohir.D05G355500' => 'ghi', 'Gohir.D06G010400' => 'ghi', 'Gohir.D06G111250' => 'ghi', 'Gohir.D06G132000' => 'ghi', 'Gohir.D06G210500' => 'ghi', 'Gohir.D07G165675' => 'ghi', 'Gohir.D08G062240' => 'ghi', 'Gohir.D08G086101' => 'ghi', 'Gohir.D08G138060' => 'ghi', 'Gohir.D09G072300' => 'ghi', 'Gohir.D10G041400' => 'ghi', 'Gohir.D11G191020' => 'ghi', 'Gohir.D11G212066' => 'ghi', 'Gohir.D12G036300' => 'ghi', 'Gohir.D12G168600' => 'ghi', 'Gohir.D13G150600' => 'ghi', 'Gorai.001G057300' => 'gra', 'Gorai.002G069900' => 'gra', 'Gorai.002G200000' => 'gra', 'Gorai.003G067600' => 'gra', 'Gorai.005G074800' => 'gra', 'Gorai.006G087300' => 'gra', 'Gorai.008G037500' => 'gra', 'Gorai.008G181400' => 'gra', 'Gorai.009G169400' => 'gra', 'Gorai.009G387900' => 'gra', 'Gorai.010G013300' => 'gra', 'Gorai.010G153800' => 'gra', 'Gorai.010G255800' => 'gra', 'Gorai.011G043700' => 'gra', 'Gorai.011G198900' => 'gra', 'Gorai.013G168400' => 'gra', 'GSVIVG01005212001' => 'vvi', 'GSVIVG01006163001' => 'vvi', 'GSVIVG01009625001' => 'vvi', 'GSVIVG01014338001' => 'vvi', 'GSVIVG01020005001' => 'vvi', 'GSVIVG01021450001' => 'vvi', 'GSVIVG01023975001' => 'vvi', 'GSVIVG01034490001' => 'vvi', 'HanXRQChr04g0112071' => 'han', 'HanXRQChr05g0131151' => 'han', 'HanXRQChr09g0262371' => 'han', 'HanXRQChr09g0268401' => 'han', 'HanXRQChr10g0279241' => 'han', 'HanXRQChr10g0297961' => 'han', 'HanXRQChr11g0326231' => 'han', 'HanXRQChr11g0328471' => 'han', 'HanXRQChr16g0507941' => 'han', 'HanXRQChr17g0560211' => 'han', 'Haze_02108' => 'cav', 'Haze_02428' => 'cav', 'Haze_05593' => 'cav', 'Haze_06448' => 'cav', 'Haze_09427' => 'cav', 'Haze_12022' => 'cav', 'Haze_17612' => 'cav', 'Haze_17928' => 'cav', 'Hma1.2p1_0032F.1_g019250' => 'hma', 'Hma1.2p1_0163F.1_g072690' => 'hma', 'Hma1.2p1_0265F.1_g106710' => 'hma', 'Hma1.2p1_0286F.1_g113970' => 'hma', 'Hma1.2p1_0363F.1_g136640' => 'hma', 'Hma1.2p1_0584F.1_g183470' => 'hma', 'Hma1.2p1_0885F.1_g232570' => 'hma', 'HPP92_006022' => 'vpl', 'HPP92_007320' => 'vpl', 'HPP92_011521' => 'vpl', 'HPP92_019387' => 'vpl', 'HPP92_024038' => 'vpl', 'Hund05891' => 'sun', 'Hund06450' => 'sun', 'Hund12053' => 'sun', 'Hund16800' => 'sun', 'Hund21222' => 'sun', 'Hund22896' => 'sun', 'Hund23746' => 'sun', 'Hund27083' => 'sun', 'Lalb_Chr02g0141831' => 'lal', 'Lalb_Chr02g0141841' => 'lal', 'Lalb_Chr05g0220411' => 'lal', 'Lalb_Chr06g0162081' => 'lal', 'Lalb_Chr09g0327651' => 'lal', 'Lalb_Chr13g0295051' => 'lal', 'Lalb_Chr15g0086801' => 'lal', 'Lalb_Chr16g0383781' => 'lal', 'Lalb_Chr16g0383791' => 'lal', 'Lalb_Chr18g0055441' => 'lal', 'Lalb_Chr18g0059611' => 'lal', 'Lalb_Chr20g0109661' => 'lal', 'Lalb_Chr20g0109831' => 'lal', 'Lalb_Chr20g0121871' => 'lal', 'Lalb_Chr22g0355361' => 'lal', 'Lalb_Chr25g0286371' => 'lal', 'Lj1A1187G43' => 'lonja', 'Lj1A1205T50' => 'lonja', 'Lj1A800G33' => 'lonja', 'Lj1C1187T7' => 'lonja', 'Lj1C843T11' => 'lonja', 'Lj1g0010940' => 'lja', 'Lj2A288T69' => 'lonja', 'Lj3g0024276' => 'lja', 'Lj4A47T76' => 'lonja', 'Lj4g0005805' => 'lja', 'Lj4g0006097' => 'lja', 'Lj4g0008528' => 'lja', 'Lj4g0024907' => 'lja', 'Lj5g0012472' => 'lja', 'Lj5g0018648' => 'lja', 'Lj6C789G1' => 'lonja', 'Lj6g0004000' => 'lja', 'Lj7A292G67' => 'lonja', 'Lj7A292T64' => 'lonja', 'Lj9A400T58' => 'lonja', 'Lsat_1_v5_gn_1_126181' => 'lsa', 'Lsat_1_v5_gn_4_123041' => 'lsa', 'Lsat_1_v5_gn_4_133620' => 'lsa', 'Lsat_1_v5_gn_4_53221' => 'lsa', 'Lsat_1_v5_gn_4_71961' => 'lsa', 'Lsat_1_v5_gn_7_105241' => 'lsa', 'Lsat_1_v5_gn_7_21361' => 'lsa', 'Lsat_1_v5_gn_7_28860' => 'lsa', 'Lsat_1_v5_gn_7_31260' => 'lsa', 'Lsat_1_v5_gn_8_52801' => 'lsa', 'Manes.02G191400' => 'mes', 'Manes.03G110100' => 'mes', 'Manes.04G071100' => 'mes', 'Manes.05G100500' => 'mes', 'Manes.05G164700' => 'mes', 'Manes.15G087000' => 'mes', 'Manes.15G121500' => 'mes', 'Manes.16G028300' => 'mes', 'Manes.17G046100' => 'mes', 'Manes.17G069800' => 'mes', 'Manes.18G100500' => 'mes', 'Mapoly0002s0109' => 'mpo', 'Mapoly0024s0007' => 'mpo', 'Mapoly0089s0032' => 'mpo', 'MBI04_g42241_MAGBIO' => 'mbi', 'MBI05_g11988_MAGBIO' => 'mbi', 'MBI05_g35452_MAGBIO' => 'mbi', 'MBI07_g30179_MAGBIO' => 'mbi', 'MBI07_g35859_MAGBIO' => 'mbi', 'MBI07_g35860_MAGBIO' => 'mbi', 'MBI07_g37166_MAGBIO' => 'mbi', 'MBI08_g18172_MAGBIO' => 'mbi', 'MBI09_g08441_MAGBIO' => 'mbi', 'MBI13_g01676_MAGBIO' => 'mbi', 'MBI14_g42955_MAGBIO' => 'mbi', 'MBI16_g13161_MAGBIO' => 'mbi', 'MBI17_g27204_MAGBIO' => 'mbi', 'MBI19_g21595_MAGBIO' => 'mbi', 'MD00G1148400' => 'mdo', 'MD02G1301200' => 'mdo', 'MD03G1227800' => 'mdo', 'MD05G1041100' => 'mdo', 'MD05G1124800' => 'mdo', 'MD05G1284000' => 'mdo', 'MD05G1338800' => 'mdo', 'MD05G1338900' => 'mdo', 'MD07G1022800' => 'mdo', 'MD10G1047500' => 'mdo', 'MD10G1127500' => 'mdo', 'MD10G1262300' => 'mdo', 'MD10G1293800' => 'mdo', 'MD16G1074300' => 'mdo', 'Medtr1g021670' => 'mtr', 'Medtr1g096320' => 'mtr', 'Medtr2g013690' => 'mtr', 'Medtr2g019450' => 'mtr', 'Medtr2g085170' => 'mtr', 'Medtr4g088785' => 'mtr', 'Medtr8g055930' => 'mtr', 'Medtr8g085850' => 'mtr', 'MELO3C002605.2' => 'cme', 'MELO3C003891.2' => 'cme', 'MELO3C004012.2' => 'cme', 'MELO3C007134.2' => 'cme', 'MELO3C008118.2' => 'cme', 'MELO3C016700.2' => 'cme', 'MELO3C024127.2' => 'cme', 'MELO3C033361.2' => 'cme', 'MELO3C033362.2' => 'cme', 'Migut.C00430' => 'egut', 'Migut.C01246' => 'egut', 'Migut.E00101' => 'egut', 'Migut.H01486' => 'egut', 'Migut.H01939' => 'egut', 'Migut.K00360' => 'egut', 'Migut.M00910' => 'egut', 'Migut.M01139' => 'egut', 'Migut.N02677' => 'egut', 'MSTRG.13252' => 'ama', 'MSTRG.14701' => 'ama', 'MSTRG.1521' => 'ama', 'MSTRG.15884' => 'ama', 'MSTRG.16242' => 'ama', 'MSTRG.22285' => 'ama', 'MSTRG.22444' => 'ama', 'MSTRG.2349' => 'ama', 'MSTRG.26308' => 'ama', 'MSTRG.28296' => 'ama', 'MSTRG.9895' => 'ama', 'Nitab4.5_0000110g0060' => 'nta', 'Nitab4.5_0000420g0130' => 'nta', 'Nitab4.5_0000422g0030' => 'nta', 'Nitab4.5_0000560g0180' => 'nta', 'Nitab4.5_0000703g0100' => 'nta', 'Nitab4.5_0000786g0200' => 'nta', 'Nitab4.5_0001336g0020' => 'nta', 'Nitab4.5_0001796g0030' => 'nta', 'Nitab4.5_0003348g0060' => 'nta', 'Nitab4.5_0003698g0040' => 'nta', 'Nitab4.5_0003942g0090' => 'nta', 'Nitab4.5_0004775g0070' => 'nta', 'Nitab4.5_0004864g0030' => 'nta', 'Nitab4.5_0005615g0020' => 'nta', 'Nitab4.5_0009288g0030' => 'nta', 'Nitab4.5_0009341g0010' => 'nta', 'Nitab4.5_0009535g0010' => 'nta', 'Nn1g03995' => 'nnu', 'Nn1g04100' => 'nnu', 'Nn1g06530' => 'nnu', 'Nn3g16404' => 'nnu', 'Nn3g17212' => 'nnu', 'Nn3g20776' => 'nnu', 'Nn3g21923' => 'nnu', 'Nn5g27737' => 'nnu', 'Nn5g29461' => 'nnu', 'Nn7g38355' => 'nnu', 'Nn8g39873' => 'nnu', 'Oeu000548.2' => 'oeu', 'Oeu004672.1' => 'oeu', 'Oeu015605.2' => 'oeu', 'Oeu016092.1' => 'oeu', 'Oeu017879.3' => 'oeu', 'Oeu024910.1' => 'oeu', 'Oeu028965.1' => 'oeu', 'Oeu031269.1' => 'oeu', 'Oeu031270.1' => 'oeu', 'Oeu032535.1' => 'oeu', 'Oeu034151.1' => 'oeu', 'Oeu034152.1' => 'oeu', 'Oeu034588.2' => 'oeu', 'Oeu050846.1' => 'oeu', 'Oeu050849.2' => 'oeu', 'Oeu051063.2' => 'oeu', 'Oeu052368.1' => 'oeu', 'Oeu052370.1' => 'oeu', 'Os01g0210400' => 'osa', 'Os01g0304300' => 'osa', 'Os01g0749100' => 'osa', 'Os02g0745800' => 'osa', 'Os03g0769050' => 'osa', 'Os05g0531500' => 'osa', 'Os06g0724300' => 'osa', 'Os11g0198100' => 'osa', 'Peaxi162Scf00069g01425' => 'pax', 'Peaxi162Scf00280g00811' => 'pax', 'Peaxi162Scf00310g00615' => 'pax', 'Peaxi162Scf00362g00542' => 'pax', 'Peaxi162Scf00461g00310' => 'pax', 'Peaxi162Scf00530g00118' => 'pax', 'Peaxi162Scf00541g00057' => 'pax', 'Peaxi162Scf00661g00017' => 'pax', 'Peaxi162Scf00926g00027' => 'pax', 'Peaxi162Scf01064g00263' => 'pax', 'Peaxi162Scf01211g00135' => 'pax', 'PGR004G2336' => 'pgr', 'PGR042G0327' => 'pgr', 'PGR042G1957' => 'pgr', 'PGR042G2003' => 'pgr', 'PGR042G3929' => 'pgr', 'PGR083G1137' => 'pgr', 'PGR083G1364' => 'pgr', 'PGSC0003DMG400003381' => 'stu', 'PGSC0003DMG400003417' => 'stu', 'PGSC0003DMG400008981' => 'stu', 'PGSC0003DMG400012417' => 'stu', 'PGSC0003DMG400012823' => 'stu', 'PGSC0003DMG400016885' => 'stu', 'PGSC0003DMG400022812' => 'stu', 'PGSC0003DMG400029726' => 'stu', 'PGSC0003DMG401009243' => 'stu', 'PGSC0003DMG401031505' => 'stu', 'PGSC0003DMG402031505' => 'stu', 'Phvul.001G017600' => 'pvu', 'Phvul.002G193500' => 'pvu', 'Phvul.002G228900' => 'pvu', 'Phvul.002G236800' => 'pvu', 'Phvul.003G049500' => 'pvu', 'Phvul.005G072000' => 'pvu', 'Phvul.006G164800' => 'pvu', 'Phvul.006G185100' => 'pvu', 'Phvul.007G090000' => 'pvu', 'Potri.001G399800' => 'ptr', 'Potri.002G149900' => 'ptr', 'Potri.004G044100' => 'ptr', 'Potri.004G177600' => 'ptr', 'Potri.009G138000' => 'ptr', 'Potri.010G094000' => 'ptr', 'Potri.011G053000' => 'ptr', 'Potri.011G119300' => 'ptr', 'Potri.013G113700' => 'ptr', 'Potri.018G107800' => 'ptr', 'Potri.019G084100' => 'ptr', 'Pp3c14_23720' => 'ppa', 'Pp3c16_6340' => 'ppa', 'Pp3c23_13420' => 'ppa', 'Pp3c24_2740' => 'ppa', 'Pp3c25_860' => 'ppa', 'Pp3c8_21750' => 'ppa', 'Prupe.1G273000' => 'ppe', 'Prupe.1G273700' => 'ppe', 'Prupe.1G274100' => 'ppe', 'Prupe.2G023300' => 'ppe', 'Prupe.4G048000' => 'ppe', 'Prupe.4G080400' => 'ppe', 'Prupe.4G181200' => 'ppe', 'Prupe.8G056900' => 'ppe', 'Prupe.8G168700' => 'ppe', 'Psat1g189080' => 'psa', 'Psat1g204760' => 'psa', 'Psat4g175560' => 'psa', 'Psat4g177720' => 'psa', 'Psat5g244240' => 'psa', 'Psat6g010720' => 'psa', 'Psat6g187200' => 'psa', 'Psat7g072040' => 'psa', 'PSO017G3501' => 'pso', 'PSO063G2148' => 'pso', 'PSO063G5608' => 'pso', 'PSO210G6392' => 'pso', 'PSO541G2319' => 'pso', 'PSO541G2836' => 'pso', 'PSO541G4012' => 'pso', 'PSO541G6253' => 'pso', 'PSO675G0580' => 'pso', 'PSO675G0856' => 'pso', 'PSO675G5635' => 'pso', 'PSO675G9157' => 'pso', 'PSO832G1660' => 'pso', 'PSO832G1969' => 'pso', 'QL02p007186' => 'qlo', 'QL02p033904' => 'qlo', 'QL03p064391' => 'qlo', 'QL05p040593' => 'qlo', 'QL05p058242' => 'qlo', 'QL08p021825' => 'qlo', 'QL11p004981' => 'qlo', 'RcHm_v2.0_Chr1g0318301' => 'rch', 'RcHm_v2.0_Chr4g0418501' => 'rch', 'RcHm_v2.0_Chr4g0439971' => 'rch', 'RcHm_v2.0_Chr5g0008541' => 'rch', 'RcHm_v2.0_Chr5g0014101' => 'rch', 'RcHm_v2.0_Chr5g0014131' => 'rch', 'RcHm_v2.0_Chr5g0033621' => 'rch', 'RcHm_v2.0_Chr6g0272041' => 'rch', 'RcHm_v2.0_Chr6g0278831' => 'rch', 'Rhsim02G0130400' => 'rsi', 'Rhsim02G0171100' => 'rsi', 'Rhsim05G0053000' => 'rsi', 'Rhsim05G0053100' => 'rsi', 'Rhsim06G0096500' => 'rsi', 'Rhsim06G0096600' => 'rsi', 'Rhsim06G0199100' => 'rsi', 'Rhsim12G0062300' => 'rsi', 'Rhsim12G0062800' => 'rsi', 'Sabra02G0118600' => 'sbr', 'Sabra04G0027300' => 'sbr', 'Sabra04G0119500' => 'sbr', 'Sabra08G0112500' => 'sbr', 'Sabra11G0036800' => 'sbr', 'Sabra11G0103800' => 'sbr', 'Sabra13G0096300' => 'sbr', 'Sabra16G0262300' => 'sbr', 'Sabra18G0091700' => 'sbr', 'Sabra19G0095400' => 'sbr', 'SalBow6G3080' => 'sbo', 'SalBow7G1157' => 'sbo', 'SalBow7G2123' => 'sbo', 'SalBow7G2285' => 'sbo', 'SalBow7G3537' => 'sbo', 'SalBow8G2947' => 'sbo', 'SalBow8G4463' => 'sbo', 'SalBow8G5466' => 'sbo', 'Sc01g0001750' => 'sci', 'Sc02g0006640' => 'sci', 'Sc02g0006670' => 'sci', 'Sc04g0008220' => 'sci', 'Sc05g0006190' => 'sci', 'Sc08g0002760' => 'sci', 'Sc17g0006170' => 'sci', 'Sc22g0002050' => 'sci', 'Sc23g0001190' => 'sci', 'Sc24g0000980' => 'sci', 'Sed0006245' => 'sed', 'Sed0007543' => 'sed', 'Sed0009411' => 'sed', 'Sed0010765' => 'sed', 'Sed0012944' => 'sed', 'Sed0014682' => 'sed', 'Sed0016174' => 'sed', 'Sed0016796' => 'sed', 'Sed0020317' => 'sed', 'Sed0021467' => 'sed', 'SEGI_01316' => 'sgi', 'SEGI_03374' => 'sgi', 'SEGI_16265' => 'sgi', 'SEGI_18569' => 'sgi', 'SEGI_20351' => 'sgi', 'SEGI_26395' => 'sgi', 'SEGI_29469' => 'sgi', 'SEGI_34771' => 'sgi', 'SEGI_36769' => 'sgi', 'SEGI_37139' => 'sgi', 'SGA_v2.0_scaffold100G29687' => 'sas', 'SGA_v2.0_scaffold118G32472' => 'sas', 'SGA_v2.0_scaffold14G07051' => 'sas', 'SGA_v2.0_scaffold183G39845' => 'sas', 'SGA_v2.0_scaffold1G00174' => 'sas', 'SGA_v2.0_scaffold22G09714' => 'sas', 'SGA_v2.0_scaffold333G48992' => 'sas', 'SGA_v2.0_scaffold46G17491' => 'sas', 'SGA_v2.0_scaffold49G18294' => 'sas', 'SGA_v2.0_scaffold63G21658' => 'sas', 'SHI01741' => 'shi', 'SHI05771' => 'shi', 'SHI18077' => 'shi', 'SHI20525' => 'shi', 'SHI20527' => 'shi', 'SHI20528' => 'shi', 'SMO172G0185' => 'smo', 'SMO198G0020' => 'smo', 'SMO351G0006' => 'smo', 'SMO356G0118' => 'smo', 'SMO358G0296' => 'smo', 'SMO367G0079' => 'smo', 'SMO367G1277' => 'smo', 'Solyc01g014220.3' => 'sly', 'Solyc01g111770.2' => 'sly', 'Solyc02g078180.3' => 'sly', 'Solyc03g006430.3' => 'sly', 'Solyc03g006456.1' => 'sly', 'Solyc03g079860.2' => 'sly', 'Solyc04g079770.3' => 'sly', 'Solyc05g007430.4' => 'sly', 'Solyc07g063150.3' => 'sly', 'Solyc08g016620.3' => 'sly', 'Solyc09g057590.3' => 'sly', 'Solyc09g057600.1' => 'sly', 'Solyc10g009050.3' => 'sly', 'Solyc11g017420.2' => 'sly', 'Sopen01g053810' => 'spe', 'Sopen02g023040' => 'spe', 'Sopen03g002440' => 'spe', 'Sopen04g033350' => 'spe', 'Sopen05g003310' => 'spe', 'Sopen07g004050' => 'spe', 'Sopen07g031340' => 'spe', 'Sopen08g006990' => 'spe', 'Sopen10g004830' => 'spe', 'Sopen11g009370' => 'spe', 'Sp1g24450' => 'spa', 'Sp1g29670' => 'spa', 'Sp1g39600' => 'spa', 'Sp2g11080' => 'spa', 'Sp2g13970' => 'spa', 'Sp4g16130' => 'spa', 'Sp6g13080' => 'spa', 'Sp7g37270' => 'spa', 'TAR371G0065' => 'tar', 'TAR376G0340' => 'tar', 'TAR376G0435' => 'tar', 'TAR381G0002' => 'tar', 'TAR381G1236' => 'tar', 'TAR624G0055' => 'tar', 'TAR624G0324' => 'tar', 'TAR624G0696' => 'tar', 'TAR624G0906' => 'tar', 'TAR625G0107' => 'tar', 'TAR626G0015' => 'tar', 'TAR626G1356' => 'tar', 'TAR627G0888' => 'tar', 'TAR628G0399' => 'tar', 'TAR628G1327' => 'tar', 'TAR629G2831' => 'tar', 'TAR629G2874' => 'tar', 'TAR633G1432' => 'tar', 'TAR633G2771' => 'tar', 'THA.LOC104803394' => 'tha', 'THA.LOC104805153' => 'tha', 'THA.LOC104806784' => 'tha', 'THA.LOC104810473' => 'tha', 'THA.LOC104813100' => 'tha', 'THA.LOC104814215' => 'tha', 'THA.LOC104815554' => 'tha', 'THA.LOC104820544' => 'tha', 'THA.LOC104824754' => 'tha', 'THA.LOC104827717' => 'tha', 'Thecc.02G031400' => 'tca', 'Thecc.02G055900' => 'tca', 'Thecc.02G350800' => 'tca', 'Thecc.06G150900' => 'tca', 'Thecc.06G186600' => 'tca', 'Thecc.07G089600' => 'tca', 'Thecc.08G020400' => 'tca', 'Thecc.08G182100' => 'tca', 'Thhalv10000873m.g' => 'esa', 'Thhalv10004185m.g' => 'esa', 'Thhalv10006981m.g' => 'esa', 'Thhalv10007204m.g' => 'esa', 'Thhalv10011374m.g' => 'esa', 'Thhalv10013482m.g' => 'esa', 'Thhalv10017801m.g' => 'esa', 'Thhalv10024983m.g' => 'esa', 'TPR.G12072' => 'tpr', 'TPR.G15769' => 'tpr', 'TPR.G16504' => 'tpr', 'TPR.G16506' => 'tpr', 'TPR.G24345' => 'tpr', 'TPR.G26666' => 'tpr', 'TPR.G27320' => 'tpr', 'TPR.G31819' => 'tpr', 'TPR.G38879' => 'tpr', 'TPR.G39015' => 'tpr', 'TPR.G8819' => 'tpr', 'TWI09G0924' => 'twi', 'TWI12G0811' => 'twi', 'TWI12G1294' => 'twi', 'TWI31G0150' => 'twi', 'TWI36G1262' => 'twi', 'TWI38G1287' => 'twi', 'TWI38G1633' => 'twi', 'TWI38G1982' => 'twi', 'TWI39G0116' => 'twi', 'TWI60G1011' => 'twi', 'TWI63G0171' => 'twi', 'TWI73G0839' => 'twi', 'TWI79G1511' => 'twi', 'unitig_0.g915' => 'ugi', 'unitig_0.g916' => 'ugi', 'unitig_21.g20219' => 'ugi', 'unitig_21.g20416' => 'ugi', 'unitig_578.g16132' => 'ugi', 'unitig_578.g16718' => 'ugi', 'unitig_62.g23481' => 'ugi', 'unitig_744.g24535' => 'ugi', 'unitig_749.g13525' => 'ugi', 'vmacro01248' => 'vma', 'vmacro02290' => 'vma', 'vmacro10946' => 'vma', 'vmacro11865' => 'vma', 'vmacro12493' => 'vma', 'vmacro17322' => 'vma', 'vmacro21599' => 'vma', 'vmacro23041' => 'vma', 'VMungo0251G0004' => 'vmu', 'VMungo0251G2639' => 'vmu', 'VMungo0251G2967' => 'vmu', 'VMungo0540G0864' => 'vmu', 'VMungo0540G1569' => 'vmu', 'VMungo0647G0317' => 'vmu', 'VMungo0720G1373' => 'vmu', 'VMungo0720G1508' => 'vmu', 'VMungo1080G0485' => 'vmu', 'VMungo1215G3177' => 'vmu', 'Zm00001eb112600' => 'zma', 'Zm00001eb120220' => 'zma', 'Zm00001eb153240' => 'zma', 'Zm00001eb168880' => 'zma', 'Zm00001eb213920' => 'zma', 'Zm00001eb228280' => 'zma', 'Zm00001eb254580' => 'zma', 'Zm00001eb272180' => 'zma', 'Zm00001eb293190' => 'zma', 'Zm00001eb322930' => 'zma', 'Zm00001eb353360' => 'zma', 'Zm00001eb353390' => 'zma', 'Zm00001eb353430' => 'zma', 'Zm00001eb353440' => 'zma', 'Zm00001eb353780' => 'zma' ) $gf_id = 'HOM05D000499' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000499' ) $data_identifier = 'HOM05D000499' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 29, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 12, 'amhyb' => (int) 8, 'aly' => (int) 12, 'aox' => (int) 9, 'arhy' => (int) 26, 'ath' => (int) 8, 'atr' => (int) 7, 'acertr' => (int) 10, 'cqu' => (int) 15, 'bca' => (int) 29, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 11, 'cansat' => (int) 8, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 9, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 8, 'cpa' => (int) 10, 'csa' => (int) 7, 'camsi' => (int) 20, 'dca' => (int) 8, 'din' => (int) 12, 'dzi' => (int) 14, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 6, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 38, 'gra' => (int) 16, 'vvi' => (int) 8, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 5, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 11, 'lja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 11, 'mpo' => (int) 3, 'mbi' => (int) 14, 'mdo' => (int) 14, 'mtr' => (int) 8, 'cme' => (int) 9, 'egut' => (int) 9, 'ama' => (int) 11, 'nta' => (int) 17, 'nnu' => (int) 11, 'oeu' => (int) 18, 'osa' => (int) 8, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 6, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 9, 'rsi' => (int) 9, 'sbr' => (int) 10, 'sbo' => (int) 8, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 10, 'sas' => (int) 10, 'shi' => (int) 6, 'smo' => (int) 7, 'sly' => (int) 14, 'spe' => (int) 10, 'spa' => (int) 8, 'tar' => (int) 19, 'tha' => (int) 10, 'tca' => (int) 8, 'esa' => (int) 8, 'tpr' => (int) 11, 'twi' => (int) 13, 'ugi' => (int) 9, 'vma' => (int) 8, 'vmu' => (int) 10, 'zma' => (int) 15 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb353780' $species_info = array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ) $local_species = 'hma' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000499', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1066', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p29780' => 'bna', 'A02p33180' => 'bna', 'A03p16470' => 'bna', 'A03p66010' => 'bna', 'A04p25970' => 'bna', 'A06p01270' => 'bna', 'A06p46080' => 'bna', 'A07p11400' => 'bna', 'A08p01840' => 'bna', 'A08p08230' => 'bna', 'A08p25740' => 'bna', 'A09p32070' => 'bna', 'A09p37830' => 'bna', 'A09p42840' => 'bna', 'A09p42850' => 'bna', 'Aa31LG10G2060' => 'aar', 'Aa31LG2G7410' => 'aar', 'Aa31LG6G10200' => 'aar', 'Aa31LG6G16680' => 'aar', 'Aa31LG6G8470' => 'aar', 'Aa31LG9G12730' => 'aar', 'Aa31LG9G13680' => 'aar', 'Aa31LG9G14920' => 'aar', 'Aa31LG9G6650' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4977' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5467' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3254' => 'aag', 'Actinidia02578' => 'ach', 'Actinidia07693' => 'ach', 'Actinidia08413' => 'ach', 'Actinidia08414' => 'ach', 'Actinidia15289' => 'ach', 'Actinidia19871' => 'ach', 'Actinidia21475' => 'ach', 'Actinidia22576' => 'ach', 'Actinidia28327' => 'ach', 'Actinidia32491' => 'ach', 'Actinidia39463' => 'ach', 'Actinidia39571' => 'ach', 'Ah.01g013750' => 'amhyb', 'Ah.01g023210' => 'amhyb', 'Ah.04g164850' => 'amhyb', 'Ah.05g178060' => 'amhyb', 'Ah.07g204270' => 'amhyb', 'Ah.07g208480' => 'amhyb', 'Ah.09g237410' => 'amhyb', 'Ah.14g089460' => 'amhyb', 'AL1G41790' => 'aly', 'AL1G49050' => 'aly', 'AL1G53810' => 'aly', 'AL1G61400' => 'aly', 'AL4G18580' => 'aly', 'AL5G12510' => 'aly', 'AL5G12540' => 'aly', 'AL6G43230' => 'aly', 'AL7G10370' => 'aly', 'AL7G19250' => 'aly', 'AL8G12240' => 'aly', 'AL8G18540' => 'aly', 'Aqoxy1G02409' => 'aox', 'Aqoxy2G03993' => 'aox', 'Aqoxy3G03357' => 'aox', 'Aqoxy4G00785' => 'aox', 'Aqoxy5G02598' => 'aox', 'Aqoxy6G00132' => 'aox', 'Aqoxy7G01776' => 'aox', 'Aqoxy7G02316' => 'aox', 'Aqoxy7G03973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.12AFKW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B8730' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27IQR1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3F75VG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3RE0GA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41TCQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.527VTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FIR39' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5W8UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DA38EV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ63HS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H1I32C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HC27T5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4M8AP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7N3CZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9UVDZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LS1NQA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT1D4B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SKC4TM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCFV76' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF9Q1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQWD9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1ZM88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WE07RT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YCK7VH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJE6Q6' => 'arhy', 'AT1G28240' => 'ath', 'AT1G34550' => 'ath', 'AT1G53040' => 'ath', 'AT2G02910' => 'ath', 'AT4G09630' => 'ath', 'AT4G38500' => 'ath', 'AT5G42660' => 'ath', 'AT5G46220' => 'ath', 'ATR0152G026' => 'atr', 'ATR0564G343' => 'atr', 'ATR0706G151' => 'atr', 'ATR0733G207' => 'atr', 'ATR0751G234' => 'atr', 'ATR0807G048' => 'atr', 'ATR1091G084' => 'atr', 'Atru.chr10.1229' => 'acertr', 'Atru.chr10.1230' => 'acertr', 'Atru.chr10.1874' => 'acertr', 'Atru.chr11.1808' => 'acertr', 'Atru.chr13.1795' => 'acertr', 'Atru.chr13.570' => 'acertr', 'Atru.chr2.2608' => 'acertr', 'Atru.chr2.2609' => 'acertr', 'Atru.chr5.3428' => 'acertr', 'Atru.chr8.1171' => 'acertr', 'AUR62004651' => 'cqu', 'AUR62008675' => 'cqu', 'AUR62010014' => 'cqu', 'AUR62013004' => 'cqu', 'AUR62014825' => 'cqu', 'AUR62015015' => 'cqu', 'AUR62015151' => 'cqu', 'AUR62017020' => 'cqu', 'AUR62019422' => 'cqu', 'AUR62023570' => 'cqu', 'AUR62025571' => 'cqu', 'AUR62029098' => 'cqu', 'AUR62033863' => 'cqu', 'AUR62034296' => 'cqu', 'AUR62040075' => 'cqu', 'BcaB02g07334' => 'bca', 'BcaB02g10575' => 'bca', 'BcaB03g12119' => 'bca', 'BcaB03g12120' => 'bca', 'BcaB03g13945' => 'bca', 'BcaB04g17123' => 'bca', 'BcaB04g17867' => 'bca', 'BcaB04g19839' => 'bca', 'BcaB07g30317' => 'bca', 'BcaB07g32432' => 'bca', 'BcaB07g33362' => 'bca', 'BcaB08g36611' => 'bca', 'BcaC01g00028' => 'bca', 'BcaC01g01356' => 'bca', 'BcaC01g02034' => 'bca', 'BcaC01g06051' => 'bca', 'BcaC03g16839' => 'bca', 'BcaC03g17176' => 'bca', 'BcaC05g26829' => 'bca', 'BcaC06g31490' => 'bca', 'BcaC06g35344' => 'bca', 'BcaC06g36570' => 'bca', 'BcaC07g37537' => 'bca', 'BcaC08g43491' => 'bca', 'BcaC08g43773' => 'bca', 'BcaNung00234' => 'bca', 'BcaNung01982' => 'bca', 'BcaNung03707' => 'bca', 'BcaNung06454' => 'bca', 'BolC2t10762H' => 'bol', 'BolC2t11191H' => 'bol', 'BolC3t14322H' => 'bol', 'BolC3t19747H' => 'bol', 'BolC3t21425H' => 'bol', 'BolC4t27800H' => 'bol', 'BolC5t31423H' => 'bol', 'BolC6t35951H' => 'bol', 'BolC6t36282H' => 'bol', 'BolC7t40678H' => 'bol', 'BolC7t40679H' => 'bol', 'BolC7t42222H' => 'bol', 'BolC7t43492H' => 'bol', 'BolC7t46785H' => 'bol', 'BolC8t47853H' => 'bol', 'BolC9t56805H' => 'bol', 'BraA02t08000Z' => 'bra', 'BraA02t08341Z' => 'bra', 'BraA03t10936Z' => 'bra', 'BraA03t15657Z' => 'bra', 'BraA04t18100Z' => 'bra', 'BraA05t20523Z' => 'bra', 'BraA06t23353Z' => 'bra', 'BraA06t27473Z' => 'bra', 'BraA06t27769Z' => 'bra', 'BraA07t28928Z' => 'bra', 'BraA08t32236Z' => 'bra', 'BraA08t32841Z' => 'bra', 'BraA08t34524Z' => 'bra', 'BraA09t38742Z' => 'bra', 'BraA09t39295Z' => 'bra', 'C02p47180' => 'bna', 'C02p50990' => 'bna', 'C03p19360' => 'bna', 'C03p74950' => 'bna', 'C03p91000' => 'bna', 'C04p63260' => 'bna', 'C05p27050' => 'bna', 'C06p08750' => 'bna', 'C06p11490' => 'bna', 'C07p02820' => 'bna', 'C07p17180' => 'bna', 'C07p29440' => 'bna', 'C07p63730' => 'bna', 'C09p39260' => 'bna', 'CAN.G1164.34' => 'can', 'CAN.G1164.39' => 'can', 'CAN.G1530.3' => 'can', 'CAN.G162.61' => 'can', 'CAN.G176.6' => 'can', 'CAN.G289.49' => 'can', 'CAN.G370.21' => 'can', 'CAN.G370.22' => 'can', 'CAN.G371.117' => 'can', 'CAN.G58.37' => 'can', 'CAN.G588.98' => 'can', 'CANSAT21G2266' => 'cansat', 'CANSAT25G2799' => 'cansat', 'CANSAT35G0862' => 'cansat', 'CANSAT35G1704' => 'cansat', 'CANSAT35G1760' => 'cansat', 'CANSAT56G3971' => 'cansat', 'CANSAT56G4116' => 'cansat', 'CANSAT80G1259' => 'cansat', 'CARHR027730' => 'chi', 'CARHR033880' => 'chi', 'CARHR043270' => 'chi', 'CARHR145330' => 'chi', 'CARHR145340' => 'chi', 'CARHR175570' => 'chi', 'CARHR181570' => 'chi', 'CARHR258470' => 'chi', 'CARHR260490' => 'chi', 'CARHR294220' => 'chi', 'Carub.0001s2668' => 'cru', 'Carub.0001s3257' => 'cru', 'Carub.0001s4220' => 'cru', 'Carub.0005s0179' => 'cru', 'Carub.0006s2807' => 'cru', 'Carub.0007s0039' => 'cru', 'Carub.0008s0169' => 'cru', 'Carub.0008s0636' => 'cru', 'Ca_00338_v3' => 'car', 'Ca_00542_v3' => 'car', 'Ca_01844_v3' => 'car', 'Ca_10611_v3' => 'car', 'Ca_13326_v3' => 'car', 'Ca_17944_v3' => 'car', 'Ca_18546_v3' => 'car', 'Ca_24219_v3' => 'car', 'Ca_29972_v3' => 'car', 'CBR_g3681' => 'cbr', 'CBR_g40021' => 'cbr', 'Cc01_g08140' => 'ccan', 'Cc02_g13410' => 'ccan', 'Cc02_g37480' => 'ccan', 'Cc05_g12030' => 'ccan', 'Cc09_g03370' => 'ccan', 'Cc09_g10300' => 'ccan', 'Cc10_g03530' => 'ccan', 'Cc10_g11380' => 'ccan', 'CDE01G0176' => 'cde', 'CDE02G0675' => 'cde', 'CDE02G0942' => 'cde', 'CDE02G1153' => 'cde', 'CDE02G4177' => 'cde', 'CDE04G2117' => 'cde', 'CDE04G2736' => 'cde', 'CDE08G1161' => 'cde', 'CDE09G1238' => 'cde', 'Cfa000467' => 'cfa', 'Cfa000947' => 'cfa', 'Cfa004969' => 'cfa', 'Cfa005284' => 'cfa', 'Cfa008993' => 'cfa', 'Cfa018187' => 'cfa', 'Cfa018454' => 'cfa', 'Cfa020585' => 'cfa', 'Ciclev10000424m.g' => 'ccl', 'Ciclev10003605m.g' => 'ccl', 'Ciclev10007828m.g' => 'ccl', 'Ciclev10014620m.g' => 'ccl', 'Ciclev10015169m.g' => 'ccl', 'Ciclev10018291m.g' => 'ccl', 'Ciclev10028256m.g' => 'ccl', 'Ciclev10033822m.g' => 'ccl', 'CiPaw.05G060300' => 'cil', 'CiPaw.05G085000' => 'cil', 'CiPaw.06G083700' => 'cil', 'CiPaw.06G120300' => 'cil', 'CiPaw.09G060500' => 'cil', 'CiPaw.09G123800' => 'cil', 'CiPaw.11G169700' => 'cil', 'CiPaw.12G118300' => 'cil', 'CiPaw.15G071000' => 'cil', 'CiPaw.15G081900' => 'cil', 'ClCG01G024610' => 'cla', 'ClCG03G006070' => 'cla', 'ClCG05G019250' => 'cla', 'ClCG09G009500' => 'cla', 'ClCG11G008200' => 'cla', 'ClCG11G018080' => 'cla', 'COL.COLO4_17373' => 'col', 'COL.COLO4_22994' => 'col', 'COL.COLO4_26389' => 'col', 'COL.COLO4_27170' => 'col', 'COL.COLO4_31074' => 'col', 'COL.COLO4_31465' => 'col', 'COL.COLO4_36438' => 'col', 'COL.COLO4_36439' => 'col', 'Cpa.g.c38781' => 'cpa', 'Cpa.g.sc128.12' => 'cpa', 'Cpa.g.sc166.7' => 'cpa', 'Cpa.g.sc166.8' => 'cpa', 'Cpa.g.sc20.111' => 'cpa', 'Cpa.g.sc27.31' => 'cpa', 'Cpa.g.sc64.36' => 'cpa', 'Cpa.g.sc64.37' => 'cpa', 'Cpa.g.sc66.49' => 'cpa', 'Cpa.g.sc80.64' => 'cpa', 'CsaV3_1G012320' => 'csa', 'CsaV3_2G008480' => 'csa', 'CsaV3_2G033450' => 'csa', 'CsaV3_3G044830' => 'csa', 'CsaV3_4G033710' => 'csa', 'CsaV3_6G051730' => 'csa', 'CsaV3_7G025350' => 'csa', 'CSS0001067' => 'camsi', 'CSS0005996' => 'camsi', 'CSS0006590' => 'camsi', 'CSS0009673' => 'camsi', 'CSS0010201' => 'camsi', 'CSS0010549' => 'camsi', 'CSS0011364' => 'camsi', 'CSS0014473' => 'camsi', 'CSS0014961' => 'camsi', 'CSS0020191' => 'camsi', 'CSS0021165' => 'camsi', 'CSS0022306' => 'camsi', 'CSS0030591' => 'camsi', 'CSS0030696' => 'camsi', 'CSS0032653' => 'camsi', 'CSS0037487' => 'camsi', 'CSS0041102' => 'camsi', 'CSS0041261' => 'camsi', 'CSS0046246' => 'camsi', 'CSS0049256' => 'camsi', 'DCAR_004075' => 'dca', 'DCAR_011538' => 'dca', 'DCAR_019553' => 'dca', 'DCAR_020952' => 'dca', 'DCAR_021739' => 'dca', 'DCAR_027407' => 'dca', 'DCAR_027913' => 'dca', 'DCAR_028066' => 'dca', 'Dinv05899' => 'din', 'Dinv07563' => 'din', 'Dinv08010' => 'din', 'Dinv14125' => 'din', 'Dinv20172' => 'din', 'Dinv30743' => 'din', 'Dinv31229' => 'din', 'Dinv34162' => 'din', 'Dinv36028' => 'din', 'Dinv39368' => 'din', 'Dinv40565' => 'din', 'Dinv41706' => 'din', 'Duzib052G0089' => 'dzi', 'Duzib116G0641' => 'dzi', 'Duzib132G0069' => 'dzi', 'Duzib132G1219' => 'dzi', 'Duzib147G0278' => 'dzi', 'Duzib160G0480' => 'dzi', 'Duzib170G0661' => 'dzi', 'Duzib177G0591' => 'dzi', 'Duzib187G1353' => 'dzi', 'Duzib192G0858' => 'dzi', 'Duzib192G0883' => 'dzi', 'Duzib213G0506' => 'dzi', 'Duzib235G0289' => 'dzi', 'Duzib251G0422' => 'dzi', 'ECA232G3898' => 'eca', 'ECA233G5950' => 'eca', 'ECA234G1699' => 'eca', 'ECA234G2421' => 'eca', 'ECA236G0426' => 'eca', 'ECA236G4331' => 'eca', 'ECA248G2573' => 'eca', 'EL10Ac1g00077' => 'bvu', 'EL10Ac1g01746' => 'bvu', 'EL10Ac2g03464' => 'bvu', 'EL10Ac4g08176' => 'bvu', 'EL10Ac7g17521' => 'bvu', 'EL10Ac8g20386' => 'bvu', 'EL10Ac9g21343' => 'bvu', 'EL10Ac9g22688' => 'bvu', 'Eucgr.B03434' => 'egr', 'Eucgr.D00618' => 'egr', 'Eucgr.E02395' => 'egr', 'Eucgr.F01129' => 'egr', 'Eucgr.F02622' => 'egr', 'Eucgr.F04207' => 'egr', 'FAN01G0570' => 'fan', 'FAN03G3351' => 'fan', 'FAN06G3702' => 'fan', 'FAN07G2149' => 'fan', 'FAN10G3758' => 'fan', 'FAN11G1170' => 'fan', 'FAN11G2050' => 'fan', 'FAN11G2724' => 'fan', 'FAN12G1700' => 'fan', 'FAN12G2028' => 'fan', 'FAN15G1160' => 'fan', 'FAN15G3063' => 'fan', 'FAN16G2540' => 'fan', 'FAN16G3077' => 'fan', 'FAN16G3624' => 'fan', 'FAN17G0221' => 'fan', 'FAN20G2492' => 'fan', 'FAN20G2905' => 'fan', 'FAN21G0548' => 'fan', 'FAN21G1300' => 'fan', 'FAN22G0077' => 'fan', 'FAN22G1315' => 'fan', 'FAN24G1280' => 'fan', 'FAN24G1445' => 'fan', 'FAN24G3527' => 'fan', 'FAN25G0464' => 'fan', 'FAN25G2885' => 'fan', 'FAN25G3270' => 'fan', 'FAN27G1101' => 'fan', 'FAN27G2846' => 'fan', 'FAN27G3524' => 'fan', 'FvH4_2g11770' => 'fve', 'FvH4_2g15630' => 'fve', 'FvH4_3g05570' => 'fve', 'FvH4_3g09110' => 'fve', 'FvH4_3g19940' => 'fve', 'FvH4_4g04821' => 'fve', 'FvH4_4g31480' => 'fve', 'FvH4_7g01740' => 'fve', 'Glyma.05G130400' => 'gma', 'Glyma.05G156400' => 'gma', 'Glyma.07G197000' => 'gma', 'Glyma.08G085151' => 'gma', 'Glyma.08G114500' => 'gma', 'Glyma.08G300400' => 'gma', 'Glyma.10G215800' => 'gma', 'Glyma.12G224400' => 'gma', 'Glyma.13G179300' => 'gma', 'Glyma.13G218151' => 'gma', 'Glyma.13G238800' => 'gma', 'Glyma.13G276900' => 'gma', 'Glyma.14G078200' => 'gma', 'Glyma.15G074500' => 'gma', 'Glyma.15G094100' => 'gma', 'Glyma.17G247200' => 'gma', 'Glyma.18G120100' => 'gma', 'Glyma.20G176000' => 'gma', 'Gohir.A01G063600' => 'ghi', 'Gohir.A01G170301' => 'ghi', 'Gohir.A02G060500' => 'ghi', 'Gohir.A05G133850' => 'ghi', 'Gohir.A05G161400' => 'ghi', 'Gohir.A06G012900' => 'ghi', 'Gohir.A06G035901' => 'ghi', 'Gohir.A06G127100' => 'ghi', 'Gohir.A06G210500' => 'ghi', 'Gohir.A08G008650' => 'ghi', 'Gohir.A09G072700' => 'ghi', 'Gohir.A09G088301' => 'ghi', 'Gohir.A10G040600' => 'ghi', 'Gohir.A12G036300' => 'ghi', 'Gohir.A12G143350' => 'ghi', 'Gohir.A12G165500' => 'ghi', 'Gohir.A13G145700' => 'ghi', 'Gohir.D01G050000' => 'ghi', 'Gohir.D01G051366' => 'ghi', 'Gohir.D01G161350' => 'ghi', 'Gohir.D02G065900' => 'ghi', 'Gohir.D05G164200' => 'ghi', 'Gohir.D05G355500' => 'ghi', 'Gohir.D06G010400' => 'ghi', 'Gohir.D06G111250' => 'ghi', 'Gohir.D06G132000' => 'ghi', 'Gohir.D06G210500' => 'ghi', 'Gohir.D07G165675' => 'ghi', 'Gohir.D08G062240' => 'ghi', 'Gohir.D08G086101' => 'ghi', 'Gohir.D08G138060' => 'ghi', 'Gohir.D09G072300' => 'ghi', 'Gohir.D10G041400' => 'ghi', 'Gohir.D11G191020' => 'ghi', 'Gohir.D11G212066' => 'ghi', 'Gohir.D12G036300' => 'ghi', 'Gohir.D12G168600' => 'ghi', 'Gohir.D13G150600' => 'ghi', 'Gorai.001G057300' => 'gra', 'Gorai.002G069900' => 'gra', 'Gorai.002G200000' => 'gra', 'Gorai.003G067600' => 'gra', 'Gorai.005G074800' => 'gra', 'Gorai.006G087300' => 'gra', 'Gorai.008G037500' => 'gra', 'Gorai.008G181400' => 'gra', 'Gorai.009G169400' => 'gra', 'Gorai.009G387900' => 'gra', 'Gorai.010G013300' => 'gra', 'Gorai.010G153800' => 'gra', 'Gorai.010G255800' => 'gra', 'Gorai.011G043700' => 'gra', 'Gorai.011G198900' => 'gra', 'Gorai.013G168400' => 'gra', 'GSVIVG01005212001' => 'vvi', 'GSVIVG01006163001' => 'vvi', 'GSVIVG01009625001' => 'vvi', 'GSVIVG01014338001' => 'vvi', 'GSVIVG01020005001' => 'vvi', 'GSVIVG01021450001' => 'vvi', 'GSVIVG01023975001' => 'vvi', 'GSVIVG01034490001' => 'vvi', 'HanXRQChr04g0112071' => 'han', 'HanXRQChr05g0131151' => 'han', 'HanXRQChr09g0262371' => 'han', 'HanXRQChr09g0268401' => 'han', 'HanXRQChr10g0279241' => 'han', 'HanXRQChr10g0297961' => 'han', 'HanXRQChr11g0326231' => 'han', 'HanXRQChr11g0328471' => 'han', 'HanXRQChr16g0507941' => 'han', 'HanXRQChr17g0560211' => 'han', 'Haze_02108' => 'cav', 'Haze_02428' => 'cav', 'Haze_05593' => 'cav', 'Haze_06448' => 'cav', 'Haze_09427' => 'cav', 'Haze_12022' => 'cav', 'Haze_17612' => 'cav', 'Haze_17928' => 'cav', 'Hma1.2p1_0032F.1_g019250' => 'hma', 'Hma1.2p1_0163F.1_g072690' => 'hma', 'Hma1.2p1_0265F.1_g106710' => 'hma', 'Hma1.2p1_0286F.1_g113970' => 'hma', 'Hma1.2p1_0363F.1_g136640' => 'hma', 'Hma1.2p1_0584F.1_g183470' => 'hma', 'Hma1.2p1_0885F.1_g232570' => 'hma', 'HPP92_006022' => 'vpl', 'HPP92_007320' => 'vpl', 'HPP92_011521' => 'vpl', 'HPP92_019387' => 'vpl', 'HPP92_024038' => 'vpl', 'Hund05891' => 'sun', 'Hund06450' => 'sun', 'Hund12053' => 'sun', 'Hund16800' => 'sun', 'Hund21222' => 'sun', 'Hund22896' => 'sun', 'Hund23746' => 'sun', 'Hund27083' => 'sun', 'Lalb_Chr02g0141831' => 'lal', 'Lalb_Chr02g0141841' => 'lal', 'Lalb_Chr05g0220411' => 'lal', 'Lalb_Chr06g0162081' => 'lal', 'Lalb_Chr09g0327651' => 'lal', 'Lalb_Chr13g0295051' => 'lal', 'Lalb_Chr15g0086801' => 'lal', 'Lalb_Chr16g0383781' => 'lal', 'Lalb_Chr16g0383791' => 'lal', 'Lalb_Chr18g0055441' => 'lal', 'Lalb_Chr18g0059611' => 'lal', 'Lalb_Chr20g0109661' => 'lal', 'Lalb_Chr20g0109831' => 'lal', 'Lalb_Chr20g0121871' => 'lal', 'Lalb_Chr22g0355361' => 'lal', 'Lalb_Chr25g0286371' => 'lal', 'Lj1A1187G43' => 'lonja', 'Lj1A1205T50' => 'lonja', 'Lj1A800G33' => 'lonja', 'Lj1C1187T7' => 'lonja', 'Lj1C843T11' => 'lonja', 'Lj1g0010940' => 'lja', 'Lj2A288T69' => 'lonja', 'Lj3g0024276' => 'lja', 'Lj4A47T76' => 'lonja', 'Lj4g0005805' => 'lja', 'Lj4g0006097' => 'lja', 'Lj4g0008528' => 'lja', 'Lj4g0024907' => 'lja', 'Lj5g0012472' => 'lja', 'Lj5g0018648' => 'lja', 'Lj6C789G1' => 'lonja', 'Lj6g0004000' => 'lja', 'Lj7A292G67' => 'lonja', 'Lj7A292T64' => 'lonja', 'Lj9A400T58' => 'lonja', 'Lsat_1_v5_gn_1_126181' => 'lsa', 'Lsat_1_v5_gn_4_123041' => 'lsa', 'Lsat_1_v5_gn_4_133620' => 'lsa', 'Lsat_1_v5_gn_4_53221' => 'lsa', 'Lsat_1_v5_gn_4_71961' => 'lsa', 'Lsat_1_v5_gn_7_105241' => 'lsa', 'Lsat_1_v5_gn_7_21361' => 'lsa', 'Lsat_1_v5_gn_7_28860' => 'lsa', 'Lsat_1_v5_gn_7_31260' => 'lsa', 'Lsat_1_v5_gn_8_52801' => 'lsa', 'Manes.02G191400' => 'mes', 'Manes.03G110100' => 'mes', 'Manes.04G071100' => 'mes', 'Manes.05G100500' => 'mes', 'Manes.05G164700' => 'mes', 'Manes.15G087000' => 'mes', 'Manes.15G121500' => 'mes', 'Manes.16G028300' => 'mes', 'Manes.17G046100' => 'mes', 'Manes.17G069800' => 'mes', 'Manes.18G100500' => 'mes', 'Mapoly0002s0109' => 'mpo', 'Mapoly0024s0007' => 'mpo', 'Mapoly0089s0032' => 'mpo', 'MBI04_g42241_MAGBIO' => 'mbi', 'MBI05_g11988_MAGBIO' => 'mbi', 'MBI05_g35452_MAGBIO' => 'mbi', 'MBI07_g30179_MAGBIO' => 'mbi', 'MBI07_g35859_MAGBIO' => 'mbi', 'MBI07_g35860_MAGBIO' => 'mbi', 'MBI07_g37166_MAGBIO' => 'mbi', 'MBI08_g18172_MAGBIO' => 'mbi', 'MBI09_g08441_MAGBIO' => 'mbi', 'MBI13_g01676_MAGBIO' => 'mbi', 'MBI14_g42955_MAGBIO' => 'mbi', 'MBI16_g13161_MAGBIO' => 'mbi', 'MBI17_g27204_MAGBIO' => 'mbi', 'MBI19_g21595_MAGBIO' => 'mbi', 'MD00G1148400' => 'mdo', 'MD02G1301200' => 'mdo', 'MD03G1227800' => 'mdo', 'MD05G1041100' => 'mdo', 'MD05G1124800' => 'mdo', 'MD05G1284000' => 'mdo', 'MD05G1338800' => 'mdo', 'MD05G1338900' => 'mdo', 'MD07G1022800' => 'mdo', 'MD10G1047500' => 'mdo', 'MD10G1127500' => 'mdo', 'MD10G1262300' => 'mdo', 'MD10G1293800' => 'mdo', 'MD16G1074300' => 'mdo', 'Medtr1g021670' => 'mtr', 'Medtr1g096320' => 'mtr', 'Medtr2g013690' => 'mtr', 'Medtr2g019450' => 'mtr', 'Medtr2g085170' => 'mtr', 'Medtr4g088785' => 'mtr', 'Medtr8g055930' => 'mtr', 'Medtr8g085850' => 'mtr', 'MELO3C002605.2' => 'cme', 'MELO3C003891.2' => 'cme', 'MELO3C004012.2' => 'cme', 'MELO3C007134.2' => 'cme', 'MELO3C008118.2' => 'cme', 'MELO3C016700.2' => 'cme', 'MELO3C024127.2' => 'cme', 'MELO3C033361.2' => 'cme', 'MELO3C033362.2' => 'cme', 'Migut.C00430' => 'egut', 'Migut.C01246' => 'egut', 'Migut.E00101' => 'egut', 'Migut.H01486' => 'egut', 'Migut.H01939' => 'egut', 'Migut.K00360' => 'egut', 'Migut.M00910' => 'egut', 'Migut.M01139' => 'egut', 'Migut.N02677' => 'egut', 'MSTRG.13252' => 'ama', 'MSTRG.14701' => 'ama', 'MSTRG.1521' => 'ama', 'MSTRG.15884' => 'ama', 'MSTRG.16242' => 'ama', 'MSTRG.22285' => 'ama', 'MSTRG.22444' => 'ama', 'MSTRG.2349' => 'ama', 'MSTRG.26308' => 'ama', 'MSTRG.28296' => 'ama', 'MSTRG.9895' => 'ama', 'Nitab4.5_0000110g0060' => 'nta', 'Nitab4.5_0000420g0130' => 'nta', 'Nitab4.5_0000422g0030' => 'nta', 'Nitab4.5_0000560g0180' => 'nta', 'Nitab4.5_0000703g0100' => 'nta', 'Nitab4.5_0000786g0200' => 'nta', 'Nitab4.5_0001336g0020' => 'nta', 'Nitab4.5_0001796g0030' => 'nta', 'Nitab4.5_0003348g0060' => 'nta', 'Nitab4.5_0003698g0040' => 'nta', 'Nitab4.5_0003942g0090' => 'nta', 'Nitab4.5_0004775g0070' => 'nta', 'Nitab4.5_0004864g0030' => 'nta', 'Nitab4.5_0005615g0020' => 'nta', 'Nitab4.5_0009288g0030' => 'nta', 'Nitab4.5_0009341g0010' => 'nta', 'Nitab4.5_0009535g0010' => 'nta', 'Nn1g03995' => 'nnu', 'Nn1g04100' => 'nnu', 'Nn1g06530' => 'nnu', 'Nn3g16404' => 'nnu', 'Nn3g17212' => 'nnu', 'Nn3g20776' => 'nnu', 'Nn3g21923' => 'nnu', 'Nn5g27737' => 'nnu', 'Nn5g29461' => 'nnu', 'Nn7g38355' => 'nnu', 'Nn8g39873' => 'nnu', 'Oeu000548.2' => 'oeu', 'Oeu004672.1' => 'oeu', 'Oeu015605.2' => 'oeu', 'Oeu016092.1' => 'oeu', 'Oeu017879.3' => 'oeu', 'Oeu024910.1' => 'oeu', 'Oeu028965.1' => 'oeu', 'Oeu031269.1' => 'oeu', 'Oeu031270.1' => 'oeu', 'Oeu032535.1' => 'oeu', 'Oeu034151.1' => 'oeu', 'Oeu034152.1' => 'oeu', 'Oeu034588.2' => 'oeu', 'Oeu050846.1' => 'oeu', 'Oeu050849.2' => 'oeu', 'Oeu051063.2' => 'oeu', 'Oeu052368.1' => 'oeu', 'Oeu052370.1' => 'oeu', 'Os01g0210400' => 'osa', 'Os01g0304300' => 'osa', 'Os01g0749100' => 'osa', 'Os02g0745800' => 'osa', 'Os03g0769050' => 'osa', 'Os05g0531500' => 'osa', 'Os06g0724300' => 'osa', 'Os11g0198100' => 'osa', 'Peaxi162Scf00069g01425' => 'pax', 'Peaxi162Scf00280g00811' => 'pax', 'Peaxi162Scf00310g00615' => 'pax', 'Peaxi162Scf00362g00542' => 'pax', 'Peaxi162Scf00461g00310' => 'pax', 'Peaxi162Scf00530g00118' => 'pax', 'Peaxi162Scf00541g00057' => 'pax', 'Peaxi162Scf00661g00017' => 'pax', 'Peaxi162Scf00926g00027' => 'pax', 'Peaxi162Scf01064g00263' => 'pax', 'Peaxi162Scf01211g00135' => 'pax', 'PGR004G2336' => 'pgr', 'PGR042G0327' => 'pgr', 'PGR042G1957' => 'pgr', 'PGR042G2003' => 'pgr', 'PGR042G3929' => 'pgr', 'PGR083G1137' => 'pgr', 'PGR083G1364' => 'pgr', 'PGSC0003DMG400003381' => 'stu', 'PGSC0003DMG400003417' => 'stu', 'PGSC0003DMG400008981' => 'stu', 'PGSC0003DMG400012417' => 'stu', 'PGSC0003DMG400012823' => 'stu', 'PGSC0003DMG400016885' => 'stu', 'PGSC0003DMG400022812' => 'stu', 'PGSC0003DMG400029726' => 'stu', 'PGSC0003DMG401009243' => 'stu', 'PGSC0003DMG401031505' => 'stu', 'PGSC0003DMG402031505' => 'stu', 'Phvul.001G017600' => 'pvu', 'Phvul.002G193500' => 'pvu', 'Phvul.002G228900' => 'pvu', 'Phvul.002G236800' => 'pvu', 'Phvul.003G049500' => 'pvu', 'Phvul.005G072000' => 'pvu', 'Phvul.006G164800' => 'pvu', 'Phvul.006G185100' => 'pvu', 'Phvul.007G090000' => 'pvu', 'Potri.001G399800' => 'ptr', 'Potri.002G149900' => 'ptr', 'Potri.004G044100' => 'ptr', 'Potri.004G177600' => 'ptr', 'Potri.009G138000' => 'ptr', 'Potri.010G094000' => 'ptr', 'Potri.011G053000' => 'ptr', 'Potri.011G119300' => 'ptr', 'Potri.013G113700' => 'ptr', 'Potri.018G107800' => 'ptr', 'Potri.019G084100' => 'ptr', 'Pp3c14_23720' => 'ppa', 'Pp3c16_6340' => 'ppa', 'Pp3c23_13420' => 'ppa', 'Pp3c24_2740' => 'ppa', 'Pp3c25_860' => 'ppa', 'Pp3c8_21750' => 'ppa', 'Prupe.1G273000' => 'ppe', 'Prupe.1G273700' => 'ppe', 'Prupe.1G274100' => 'ppe', 'Prupe.2G023300' => 'ppe', 'Prupe.4G048000' => 'ppe', 'Prupe.4G080400' => 'ppe', 'Prupe.4G181200' => 'ppe', 'Prupe.8G056900' => 'ppe', 'Prupe.8G168700' => 'ppe', 'Psat1g189080' => 'psa', 'Psat1g204760' => 'psa', 'Psat4g175560' => 'psa', 'Psat4g177720' => 'psa', 'Psat5g244240' => 'psa', 'Psat6g010720' => 'psa', 'Psat6g187200' => 'psa', 'Psat7g072040' => 'psa', 'PSO017G3501' => 'pso', 'PSO063G2148' => 'pso', 'PSO063G5608' => 'pso', 'PSO210G6392' => 'pso', 'PSO541G2319' => 'pso', 'PSO541G2836' => 'pso', 'PSO541G4012' => 'pso', 'PSO541G6253' => 'pso', 'PSO675G0580' => 'pso', 'PSO675G0856' => 'pso', 'PSO675G5635' => 'pso', 'PSO675G9157' => 'pso', 'PSO832G1660' => 'pso', 'PSO832G1969' => 'pso', 'QL02p007186' => 'qlo', 'QL02p033904' => 'qlo', 'QL03p064391' => 'qlo', 'QL05p040593' => 'qlo', 'QL05p058242' => 'qlo', 'QL08p021825' => 'qlo', 'QL11p004981' => 'qlo', 'RcHm_v2.0_Chr1g0318301' => 'rch', 'RcHm_v2.0_Chr4g0418501' => 'rch', 'RcHm_v2.0_Chr4g0439971' => 'rch', 'RcHm_v2.0_Chr5g0008541' => 'rch', 'RcHm_v2.0_Chr5g0014101' => 'rch', 'RcHm_v2.0_Chr5g0014131' => 'rch', 'RcHm_v2.0_Chr5g0033621' => 'rch', 'RcHm_v2.0_Chr6g0272041' => 'rch', 'RcHm_v2.0_Chr6g0278831' => 'rch', 'Rhsim02G0130400' => 'rsi', 'Rhsim02G0171100' => 'rsi', 'Rhsim05G0053000' => 'rsi', 'Rhsim05G0053100' => 'rsi', 'Rhsim06G0096500' => 'rsi', 'Rhsim06G0096600' => 'rsi', 'Rhsim06G0199100' => 'rsi', 'Rhsim12G0062300' => 'rsi', 'Rhsim12G0062800' => 'rsi', 'Sabra02G0118600' => 'sbr', 'Sabra04G0027300' => 'sbr', 'Sabra04G0119500' => 'sbr', 'Sabra08G0112500' => 'sbr', 'Sabra11G0036800' => 'sbr', 'Sabra11G0103800' => 'sbr', 'Sabra13G0096300' => 'sbr', 'Sabra16G0262300' => 'sbr', 'Sabra18G0091700' => 'sbr', 'Sabra19G0095400' => 'sbr', 'SalBow6G3080' => 'sbo', 'SalBow7G1157' => 'sbo', 'SalBow7G2123' => 'sbo', 'SalBow7G2285' => 'sbo', 'SalBow7G3537' => 'sbo', 'SalBow8G2947' => 'sbo', 'SalBow8G4463' => 'sbo', 'SalBow8G5466' => 'sbo', 'Sc01g0001750' => 'sci', 'Sc02g0006640' => 'sci', 'Sc02g0006670' => 'sci', 'Sc04g0008220' => 'sci', 'Sc05g0006190' => 'sci', 'Sc08g0002760' => 'sci', 'Sc17g0006170' => 'sci', 'Sc22g0002050' => 'sci', 'Sc23g0001190' => 'sci', 'Sc24g0000980' => 'sci', 'Sed0006245' => 'sed', 'Sed0007543' => 'sed', 'Sed0009411' => 'sed', 'Sed0010765' => 'sed', 'Sed0012944' => 'sed', 'Sed0014682' => 'sed', 'Sed0016174' => 'sed', 'Sed0016796' => 'sed', 'Sed0020317' => 'sed', 'Sed0021467' => 'sed', 'SEGI_01316' => 'sgi', 'SEGI_03374' => 'sgi', 'SEGI_16265' => 'sgi', 'SEGI_18569' => 'sgi', 'SEGI_20351' => 'sgi', 'SEGI_26395' => 'sgi', 'SEGI_29469' => 'sgi', 'SEGI_34771' => 'sgi', 'SEGI_36769' => 'sgi', 'SEGI_37139' => 'sgi', 'SGA_v2.0_scaffold100G29687' => 'sas', 'SGA_v2.0_scaffold118G32472' => 'sas', 'SGA_v2.0_scaffold14G07051' => 'sas', 'SGA_v2.0_scaffold183G39845' => 'sas', 'SGA_v2.0_scaffold1G00174' => 'sas', 'SGA_v2.0_scaffold22G09714' => 'sas', 'SGA_v2.0_scaffold333G48992' => 'sas', 'SGA_v2.0_scaffold46G17491' => 'sas', 'SGA_v2.0_scaffold49G18294' => 'sas', 'SGA_v2.0_scaffold63G21658' => 'sas', 'SHI01741' => 'shi', 'SHI05771' => 'shi', 'SHI18077' => 'shi', 'SHI20525' => 'shi', 'SHI20527' => 'shi', 'SHI20528' => 'shi', 'SMO172G0185' => 'smo', 'SMO198G0020' => 'smo', 'SMO351G0006' => 'smo', 'SMO356G0118' => 'smo', 'SMO358G0296' => 'smo', 'SMO367G0079' => 'smo', 'SMO367G1277' => 'smo', 'Solyc01g014220.3' => 'sly', 'Solyc01g111770.2' => 'sly', 'Solyc02g078180.3' => 'sly', 'Solyc03g006430.3' => 'sly', 'Solyc03g006456.1' => 'sly', 'Solyc03g079860.2' => 'sly', 'Solyc04g079770.3' => 'sly', 'Solyc05g007430.4' => 'sly', 'Solyc07g063150.3' => 'sly', 'Solyc08g016620.3' => 'sly', 'Solyc09g057590.3' => 'sly', 'Solyc09g057600.1' => 'sly', 'Solyc10g009050.3' => 'sly', 'Solyc11g017420.2' => 'sly', 'Sopen01g053810' => 'spe', 'Sopen02g023040' => 'spe', 'Sopen03g002440' => 'spe', 'Sopen04g033350' => 'spe', 'Sopen05g003310' => 'spe', 'Sopen07g004050' => 'spe', 'Sopen07g031340' => 'spe', 'Sopen08g006990' => 'spe', 'Sopen10g004830' => 'spe', 'Sopen11g009370' => 'spe', 'Sp1g24450' => 'spa', 'Sp1g29670' => 'spa', 'Sp1g39600' => 'spa', 'Sp2g11080' => 'spa', 'Sp2g13970' => 'spa', 'Sp4g16130' => 'spa', 'Sp6g13080' => 'spa', 'Sp7g37270' => 'spa', 'TAR371G0065' => 'tar', 'TAR376G0340' => 'tar', 'TAR376G0435' => 'tar', 'TAR381G0002' => 'tar', 'TAR381G1236' => 'tar', 'TAR624G0055' => 'tar', 'TAR624G0324' => 'tar', 'TAR624G0696' => 'tar', 'TAR624G0906' => 'tar', 'TAR625G0107' => 'tar', 'TAR626G0015' => 'tar', 'TAR626G1356' => 'tar', 'TAR627G0888' => 'tar', 'TAR628G0399' => 'tar', 'TAR628G1327' => 'tar', 'TAR629G2831' => 'tar', 'TAR629G2874' => 'tar', 'TAR633G1432' => 'tar', 'TAR633G2771' => 'tar', 'THA.LOC104803394' => 'tha', 'THA.LOC104805153' => 'tha', 'THA.LOC104806784' => 'tha', 'THA.LOC104810473' => 'tha', 'THA.LOC104813100' => 'tha', 'THA.LOC104814215' => 'tha', 'THA.LOC104815554' => 'tha', 'THA.LOC104820544' => 'tha', 'THA.LOC104824754' => 'tha', 'THA.LOC104827717' => 'tha', 'Thecc.02G031400' => 'tca', 'Thecc.02G055900' => 'tca', 'Thecc.02G350800' => 'tca', 'Thecc.06G150900' => 'tca', 'Thecc.06G186600' => 'tca', 'Thecc.07G089600' => 'tca', 'Thecc.08G020400' => 'tca', 'Thecc.08G182100' => 'tca', 'Thhalv10000873m.g' => 'esa', 'Thhalv10004185m.g' => 'esa', 'Thhalv10006981m.g' => 'esa', 'Thhalv10007204m.g' => 'esa', 'Thhalv10011374m.g' => 'esa', 'Thhalv10013482m.g' => 'esa', 'Thhalv10017801m.g' => 'esa', 'Thhalv10024983m.g' => 'esa', 'TPR.G12072' => 'tpr', 'TPR.G15769' => 'tpr', 'TPR.G16504' => 'tpr', 'TPR.G16506' => 'tpr', 'TPR.G24345' => 'tpr', 'TPR.G26666' => 'tpr', 'TPR.G27320' => 'tpr', 'TPR.G31819' => 'tpr', 'TPR.G38879' => 'tpr', 'TPR.G39015' => 'tpr', 'TPR.G8819' => 'tpr', 'TWI09G0924' => 'twi', 'TWI12G0811' => 'twi', 'TWI12G1294' => 'twi', 'TWI31G0150' => 'twi', 'TWI36G1262' => 'twi', 'TWI38G1287' => 'twi', 'TWI38G1633' => 'twi', 'TWI38G1982' => 'twi', 'TWI39G0116' => 'twi', 'TWI60G1011' => 'twi', 'TWI63G0171' => 'twi', 'TWI73G0839' => 'twi', 'TWI79G1511' => 'twi', 'unitig_0.g915' => 'ugi', 'unitig_0.g916' => 'ugi', 'unitig_21.g20219' => 'ugi', 'unitig_21.g20416' => 'ugi', 'unitig_578.g16132' => 'ugi', 'unitig_578.g16718' => 'ugi', 'unitig_62.g23481' => 'ugi', 'unitig_744.g24535' => 'ugi', 'unitig_749.g13525' => 'ugi', 'vmacro01248' => 'vma', 'vmacro02290' => 'vma', 'vmacro10946' => 'vma', 'vmacro11865' => 'vma', 'vmacro12493' => 'vma', 'vmacro17322' => 'vma', 'vmacro21599' => 'vma', 'vmacro23041' => 'vma', 'VMungo0251G0004' => 'vmu', 'VMungo0251G2639' => 'vmu', 'VMungo0251G2967' => 'vmu', 'VMungo0540G0864' => 'vmu', 'VMungo0540G1569' => 'vmu', 'VMungo0647G0317' => 'vmu', 'VMungo0720G1373' => 'vmu', 'VMungo0720G1508' => 'vmu', 'VMungo1080G0485' => 'vmu', 'VMungo1215G3177' => 'vmu', 'Zm00001eb112600' => 'zma', 'Zm00001eb120220' => 'zma', 'Zm00001eb153240' => 'zma', 'Zm00001eb168880' => 'zma', 'Zm00001eb213920' => 'zma', 'Zm00001eb228280' => 'zma', 'Zm00001eb254580' => 'zma', 'Zm00001eb272180' => 'zma', 'Zm00001eb293190' => 'zma', 'Zm00001eb322930' => 'zma', 'Zm00001eb353360' => 'zma', 'Zm00001eb353390' => 'zma', 'Zm00001eb353430' => 'zma', 'Zm00001eb353440' => 'zma', 'Zm00001eb353780' => 'zma' ), 'gf_id' => 'HOM05D000499', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000499' ), 'data_identifier' => 'HOM05D000499', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000499', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1066', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p29780' => 'bna', 'A02p33180' => 'bna', 'A03p16470' => 'bna', 'A03p66010' => 'bna', 'A04p25970' => 'bna', 'A06p01270' => 'bna', 'A06p46080' => 'bna', 'A07p11400' => 'bna', 'A08p01840' => 'bna', 'A08p08230' => 'bna', 'A08p25740' => 'bna', 'A09p32070' => 'bna', 'A09p37830' => 'bna', 'A09p42840' => 'bna', 'A09p42850' => 'bna', 'Aa31LG10G2060' => 'aar', 'Aa31LG2G7410' => 'aar', 'Aa31LG6G10200' => 'aar', 'Aa31LG6G16680' => 'aar', 'Aa31LG6G8470' => 'aar', 'Aa31LG9G12730' => 'aar', 'Aa31LG9G13680' => 'aar', 'Aa31LG9G14920' => 'aar', 'Aa31LG9G6650' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4977' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5467' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3254' => 'aag', 'Actinidia02578' => 'ach', 'Actinidia07693' => 'ach', 'Actinidia08413' => 'ach', 'Actinidia08414' => 'ach', 'Actinidia15289' => 'ach', 'Actinidia19871' => 'ach', 'Actinidia21475' => 'ach', 'Actinidia22576' => 'ach', 'Actinidia28327' => 'ach', 'Actinidia32491' => 'ach', 'Actinidia39463' => 'ach', 'Actinidia39571' => 'ach', 'Ah.01g013750' => 'amhyb', 'Ah.01g023210' => 'amhyb', 'Ah.04g164850' => 'amhyb', 'Ah.05g178060' => 'amhyb', 'Ah.07g204270' => 'amhyb', 'Ah.07g208480' => 'amhyb', 'Ah.09g237410' => 'amhyb', 'Ah.14g089460' => 'amhyb', 'AL1G41790' => 'aly', 'AL1G49050' => 'aly', 'AL1G53810' => 'aly', 'AL1G61400' => 'aly', 'AL4G18580' => 'aly', 'AL5G12510' => 'aly', 'AL5G12540' => 'aly', 'AL6G43230' => 'aly', 'AL7G10370' => 'aly', 'AL7G19250' => 'aly', 'AL8G12240' => 'aly', 'AL8G18540' => 'aly', 'Aqoxy1G02409' => 'aox', 'Aqoxy2G03993' => 'aox', 'Aqoxy3G03357' => 'aox', 'Aqoxy4G00785' => 'aox', 'Aqoxy5G02598' => 'aox', 'Aqoxy6G00132' => 'aox', 'Aqoxy7G01776' => 'aox', 'Aqoxy7G02316' => 'aox', 'Aqoxy7G03973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.12AFKW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B8730' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27IQR1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3F75VG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3RE0GA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41TCQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.527VTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FIR39' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5W8UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DA38EV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ63HS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H1I32C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HC27T5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4M8AP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7N3CZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9UVDZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LS1NQA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT1D4B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SKC4TM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCFV76' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF9Q1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQWD9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1ZM88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WE07RT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YCK7VH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJE6Q6' => 'arhy', 'AT1G28240' => 'ath', 'AT1G34550' => 'ath', 'AT1G53040' => 'ath', 'AT2G02910' => 'ath', 'AT4G09630' => 'ath', 'AT4G38500' => 'ath', 'AT5G42660' => 'ath', 'AT5G46220' => 'ath', 'ATR0152G026' => 'atr', 'ATR0564G343' => 'atr', 'ATR0706G151' => 'atr', 'ATR0733G207' => 'atr', 'ATR0751G234' => 'atr', 'ATR0807G048' => 'atr', 'ATR1091G084' => 'atr', 'Atru.chr10.1229' => 'acertr', 'Atru.chr10.1230' => 'acertr', 'Atru.chr10.1874' => 'acertr', 'Atru.chr11.1808' => 'acertr', 'Atru.chr13.1795' => 'acertr', 'Atru.chr13.570' => 'acertr', 'Atru.chr2.2608' => 'acertr', 'Atru.chr2.2609' => 'acertr', 'Atru.chr5.3428' => 'acertr', 'Atru.chr8.1171' => 'acertr', 'AUR62004651' => 'cqu', 'AUR62008675' => 'cqu', 'AUR62010014' => 'cqu', 'AUR62013004' => 'cqu', 'AUR62014825' => 'cqu', 'AUR62015015' => 'cqu', 'AUR62015151' => 'cqu', 'AUR62017020' => 'cqu', 'AUR62019422' => 'cqu', 'AUR62023570' => 'cqu', 'AUR62025571' => 'cqu', 'AUR62029098' => 'cqu', 'AUR62033863' => 'cqu', 'AUR62034296' => 'cqu', 'AUR62040075' => 'cqu', 'BcaB02g07334' => 'bca', 'BcaB02g10575' => 'bca', 'BcaB03g12119' => 'bca', 'BcaB03g12120' => 'bca', 'BcaB03g13945' => 'bca', 'BcaB04g17123' => 'bca', 'BcaB04g17867' => 'bca', 'BcaB04g19839' => 'bca', 'BcaB07g30317' => 'bca', 'BcaB07g32432' => 'bca', 'BcaB07g33362' => 'bca', 'BcaB08g36611' => 'bca', 'BcaC01g00028' => 'bca', 'BcaC01g01356' => 'bca', 'BcaC01g02034' => 'bca', 'BcaC01g06051' => 'bca', 'BcaC03g16839' => 'bca', 'BcaC03g17176' => 'bca', 'BcaC05g26829' => 'bca', 'BcaC06g31490' => 'bca', 'BcaC06g35344' => 'bca', 'BcaC06g36570' => 'bca', 'BcaC07g37537' => 'bca', 'BcaC08g43491' => 'bca', 'BcaC08g43773' => 'bca', 'BcaNung00234' => 'bca', 'BcaNung01982' => 'bca', 'BcaNung03707' => 'bca', 'BcaNung06454' => 'bca', 'BolC2t10762H' => 'bol', 'BolC2t11191H' => 'bol', 'BolC3t14322H' => 'bol', 'BolC3t19747H' => 'bol', 'BolC3t21425H' => 'bol', 'BolC4t27800H' => 'bol', 'BolC5t31423H' => 'bol', 'BolC6t35951H' => 'bol', 'BolC6t36282H' => 'bol', 'BolC7t40678H' => 'bol', 'BolC7t40679H' => 'bol', 'BolC7t42222H' => 'bol', 'BolC7t43492H' => 'bol', 'BolC7t46785H' => 'bol', 'BolC8t47853H' => 'bol', 'BolC9t56805H' => 'bol', 'BraA02t08000Z' => 'bra', 'BraA02t08341Z' => 'bra', 'BraA03t10936Z' => 'bra', 'BraA03t15657Z' => 'bra', 'BraA04t18100Z' => 'bra', 'BraA05t20523Z' => 'bra', 'BraA06t23353Z' => 'bra', 'BraA06t27473Z' => 'bra', 'BraA06t27769Z' => 'bra', 'BraA07t28928Z' => 'bra', 'BraA08t32236Z' => 'bra', 'BraA08t32841Z' => 'bra', 'BraA08t34524Z' => 'bra', 'BraA09t38742Z' => 'bra', 'BraA09t39295Z' => 'bra', 'C02p47180' => 'bna', 'C02p50990' => 'bna', 'C03p19360' => 'bna', 'C03p74950' => 'bna', 'C03p91000' => 'bna', 'C04p63260' => 'bna', 'C05p27050' => 'bna', 'C06p08750' => 'bna', 'C06p11490' => 'bna', 'C07p02820' => 'bna', 'C07p17180' => 'bna', 'C07p29440' => 'bna', 'C07p63730' => 'bna', 'C09p39260' => 'bna', 'CAN.G1164.34' => 'can', 'CAN.G1164.39' => 'can', 'CAN.G1530.3' => 'can', 'CAN.G162.61' => 'can', 'CAN.G176.6' => 'can', 'CAN.G289.49' => 'can', 'CAN.G370.21' => 'can', 'CAN.G370.22' => 'can', 'CAN.G371.117' => 'can', 'CAN.G58.37' => 'can', 'CAN.G588.98' => 'can', 'CANSAT21G2266' => 'cansat', 'CANSAT25G2799' => 'cansat', 'CANSAT35G0862' => 'cansat', 'CANSAT35G1704' => 'cansat', 'CANSAT35G1760' => 'cansat', 'CANSAT56G3971' => 'cansat', 'CANSAT56G4116' => 'cansat', 'CANSAT80G1259' => 'cansat', 'CARHR027730' => 'chi', 'CARHR033880' => 'chi', 'CARHR043270' => 'chi', 'CARHR145330' => 'chi', 'CARHR145340' => 'chi', 'CARHR175570' => 'chi', 'CARHR181570' => 'chi', 'CARHR258470' => 'chi', 'CARHR260490' => 'chi', 'CARHR294220' => 'chi', 'Carub.0001s2668' => 'cru', 'Carub.0001s3257' => 'cru', 'Carub.0001s4220' => 'cru', 'Carub.0005s0179' => 'cru', 'Carub.0006s2807' => 'cru', 'Carub.0007s0039' => 'cru', 'Carub.0008s0169' => 'cru', 'Carub.0008s0636' => 'cru', 'Ca_00338_v3' => 'car', 'Ca_00542_v3' => 'car', 'Ca_01844_v3' => 'car', 'Ca_10611_v3' => 'car', 'Ca_13326_v3' => 'car', 'Ca_17944_v3' => 'car', 'Ca_18546_v3' => 'car', 'Ca_24219_v3' => 'car', 'Ca_29972_v3' => 'car', 'CBR_g3681' => 'cbr', 'CBR_g40021' => 'cbr', 'Cc01_g08140' => 'ccan', 'Cc02_g13410' => 'ccan', 'Cc02_g37480' => 'ccan', 'Cc05_g12030' => 'ccan', 'Cc09_g03370' => 'ccan', 'Cc09_g10300' => 'ccan', 'Cc10_g03530' => 'ccan', 'Cc10_g11380' => 'ccan', 'CDE01G0176' => 'cde', 'CDE02G0675' => 'cde', 'CDE02G0942' => 'cde', 'CDE02G1153' => 'cde', 'CDE02G4177' => 'cde', 'CDE04G2117' => 'cde', 'CDE04G2736' => 'cde', 'CDE08G1161' => 'cde', 'CDE09G1238' => 'cde', 'Cfa000467' => 'cfa', 'Cfa000947' => 'cfa', 'Cfa004969' => 'cfa', 'Cfa005284' => 'cfa', 'Cfa008993' => 'cfa', 'Cfa018187' => 'cfa', 'Cfa018454' => 'cfa', 'Cfa020585' => 'cfa', 'Ciclev10000424m.g' => 'ccl', 'Ciclev10003605m.g' => 'ccl', 'Ciclev10007828m.g' => 'ccl', 'Ciclev10014620m.g' => 'ccl', 'Ciclev10015169m.g' => 'ccl', 'Ciclev10018291m.g' => 'ccl', 'Ciclev10028256m.g' => 'ccl', 'Ciclev10033822m.g' => 'ccl', 'CiPaw.05G060300' => 'cil', 'CiPaw.05G085000' => 'cil', 'CiPaw.06G083700' => 'cil', 'CiPaw.06G120300' => 'cil', 'CiPaw.09G060500' => 'cil', 'CiPaw.09G123800' => 'cil', 'CiPaw.11G169700' => 'cil', 'CiPaw.12G118300' => 'cil', 'CiPaw.15G071000' => 'cil', 'CiPaw.15G081900' => 'cil', 'ClCG01G024610' => 'cla', 'ClCG03G006070' => 'cla', 'ClCG05G019250' => 'cla', 'ClCG09G009500' => 'cla', 'ClCG11G008200' => 'cla', 'ClCG11G018080' => 'cla', 'COL.COLO4_17373' => 'col', 'COL.COLO4_22994' => 'col', 'COL.COLO4_26389' => 'col', 'COL.COLO4_27170' => 'col', 'COL.COLO4_31074' => 'col', 'COL.COLO4_31465' => 'col', 'COL.COLO4_36438' => 'col', 'COL.COLO4_36439' => 'col', 'Cpa.g.c38781' => 'cpa', 'Cpa.g.sc128.12' => 'cpa', 'Cpa.g.sc166.7' => 'cpa', 'Cpa.g.sc166.8' => 'cpa', 'Cpa.g.sc20.111' => 'cpa', 'Cpa.g.sc27.31' => 'cpa', 'Cpa.g.sc64.36' => 'cpa', 'Cpa.g.sc64.37' => 'cpa', 'Cpa.g.sc66.49' => 'cpa', 'Cpa.g.sc80.64' => 'cpa', 'CsaV3_1G012320' => 'csa', 'CsaV3_2G008480' => 'csa', 'CsaV3_2G033450' => 'csa', 'CsaV3_3G044830' => 'csa', 'CsaV3_4G033710' => 'csa', 'CsaV3_6G051730' => 'csa', 'CsaV3_7G025350' => 'csa', 'CSS0001067' => 'camsi', 'CSS0005996' => 'camsi', 'CSS0006590' => 'camsi', 'CSS0009673' => 'camsi', 'CSS0010201' => 'camsi', 'CSS0010549' => 'camsi', 'CSS0011364' => 'camsi', 'CSS0014473' => 'camsi', 'CSS0014961' => 'camsi', 'CSS0020191' => 'camsi', 'CSS0021165' => 'camsi', 'CSS0022306' => 'camsi', 'CSS0030591' => 'camsi', 'CSS0030696' => 'camsi', 'CSS0032653' => 'camsi', 'CSS0037487' => 'camsi', 'CSS0041102' => 'camsi', 'CSS0041261' => 'camsi', 'CSS0046246' => 'camsi', 'CSS0049256' => 'camsi', 'DCAR_004075' => 'dca', 'DCAR_011538' => 'dca', 'DCAR_019553' => 'dca', 'DCAR_020952' => 'dca', 'DCAR_021739' => 'dca', 'DCAR_027407' => 'dca', 'DCAR_027913' => 'dca', 'DCAR_028066' => 'dca', 'Dinv05899' => 'din', 'Dinv07563' => 'din', 'Dinv08010' => 'din', 'Dinv14125' => 'din', 'Dinv20172' => 'din', 'Dinv30743' => 'din', 'Dinv31229' => 'din', 'Dinv34162' => 'din', 'Dinv36028' => 'din', 'Dinv39368' => 'din', 'Dinv40565' => 'din', 'Dinv41706' => 'din', 'Duzib052G0089' => 'dzi', 'Duzib116G0641' => 'dzi', 'Duzib132G0069' => 'dzi', 'Duzib132G1219' => 'dzi', 'Duzib147G0278' => 'dzi', 'Duzib160G0480' => 'dzi', 'Duzib170G0661' => 'dzi', 'Duzib177G0591' => 'dzi', 'Duzib187G1353' => 'dzi', 'Duzib192G0858' => 'dzi', 'Duzib192G0883' => 'dzi', 'Duzib213G0506' => 'dzi', 'Duzib235G0289' => 'dzi', 'Duzib251G0422' => 'dzi', 'ECA232G3898' => 'eca', 'ECA233G5950' => 'eca', 'ECA234G1699' => 'eca', 'ECA234G2421' => 'eca', 'ECA236G0426' => 'eca', 'ECA236G4331' => 'eca', 'ECA248G2573' => 'eca', 'EL10Ac1g00077' => 'bvu', 'EL10Ac1g01746' => 'bvu', 'EL10Ac2g03464' => 'bvu', 'EL10Ac4g08176' => 'bvu', 'EL10Ac7g17521' => 'bvu', 'EL10Ac8g20386' => 'bvu', 'EL10Ac9g21343' => 'bvu', 'EL10Ac9g22688' => 'bvu', 'Eucgr.B03434' => 'egr', 'Eucgr.D00618' => 'egr', 'Eucgr.E02395' => 'egr', 'Eucgr.F01129' => 'egr', 'Eucgr.F02622' => 'egr', 'Eucgr.F04207' => 'egr', 'FAN01G0570' => 'fan', 'FAN03G3351' => 'fan', 'FAN06G3702' => 'fan', 'FAN07G2149' => 'fan', 'FAN10G3758' => 'fan', 'FAN11G1170' => 'fan', 'FAN11G2050' => 'fan', 'FAN11G2724' => 'fan', 'FAN12G1700' => 'fan', 'FAN12G2028' => 'fan', 'FAN15G1160' => 'fan', 'FAN15G3063' => 'fan', 'FAN16G2540' => 'fan', 'FAN16G3077' => 'fan', 'FAN16G3624' => 'fan', 'FAN17G0221' => 'fan', 'FAN20G2492' => 'fan', 'FAN20G2905' => 'fan', 'FAN21G0548' => 'fan', 'FAN21G1300' => 'fan', 'FAN22G0077' => 'fan', 'FAN22G1315' => 'fan', 'FAN24G1280' => 'fan', 'FAN24G1445' => 'fan', 'FAN24G3527' => 'fan', 'FAN25G0464' => 'fan', 'FAN25G2885' => 'fan', 'FAN25G3270' => 'fan', 'FAN27G1101' => 'fan', 'FAN27G2846' => 'fan', 'FAN27G3524' => 'fan', 'FvH4_2g11770' => 'fve', 'FvH4_2g15630' => 'fve', 'FvH4_3g05570' => 'fve', 'FvH4_3g09110' => 'fve', 'FvH4_3g19940' => 'fve', 'FvH4_4g04821' => 'fve', 'FvH4_4g31480' => 'fve', 'FvH4_7g01740' => 'fve', 'Glyma.05G130400' => 'gma', 'Glyma.05G156400' => 'gma', 'Glyma.07G197000' => 'gma', 'Glyma.08G085151' => 'gma', 'Glyma.08G114500' => 'gma', 'Glyma.08G300400' => 'gma', 'Glyma.10G215800' => 'gma', 'Glyma.12G224400' => 'gma', 'Glyma.13G179300' => 'gma', 'Glyma.13G218151' => 'gma', 'Glyma.13G238800' => 'gma', 'Glyma.13G276900' => 'gma', 'Glyma.14G078200' => 'gma', 'Glyma.15G074500' => 'gma', 'Glyma.15G094100' => 'gma', 'Glyma.17G247200' => 'gma', 'Glyma.18G120100' => 'gma', 'Glyma.20G176000' => 'gma', 'Gohir.A01G063600' => 'ghi', 'Gohir.A01G170301' => 'ghi', 'Gohir.A02G060500' => 'ghi', 'Gohir.A05G133850' => 'ghi', 'Gohir.A05G161400' => 'ghi', 'Gohir.A06G012900' => 'ghi', 'Gohir.A06G035901' => 'ghi', 'Gohir.A06G127100' => 'ghi', 'Gohir.A06G210500' => 'ghi', 'Gohir.A08G008650' => 'ghi', 'Gohir.A09G072700' => 'ghi', 'Gohir.A09G088301' => 'ghi', 'Gohir.A10G040600' => 'ghi', 'Gohir.A12G036300' => 'ghi', 'Gohir.A12G143350' => 'ghi', 'Gohir.A12G165500' => 'ghi', 'Gohir.A13G145700' => 'ghi', 'Gohir.D01G050000' => 'ghi', 'Gohir.D01G051366' => 'ghi', 'Gohir.D01G161350' => 'ghi', 'Gohir.D02G065900' => 'ghi', 'Gohir.D05G164200' => 'ghi', 'Gohir.D05G355500' => 'ghi', 'Gohir.D06G010400' => 'ghi', 'Gohir.D06G111250' => 'ghi', 'Gohir.D06G132000' => 'ghi', 'Gohir.D06G210500' => 'ghi', 'Gohir.D07G165675' => 'ghi', 'Gohir.D08G062240' => 'ghi', 'Gohir.D08G086101' => 'ghi', 'Gohir.D08G138060' => 'ghi', 'Gohir.D09G072300' => 'ghi', 'Gohir.D10G041400' => 'ghi', 'Gohir.D11G191020' => 'ghi', 'Gohir.D11G212066' => 'ghi', 'Gohir.D12G036300' => 'ghi', 'Gohir.D12G168600' => 'ghi', 'Gohir.D13G150600' => 'ghi', 'Gorai.001G057300' => 'gra', 'Gorai.002G069900' => 'gra', 'Gorai.002G200000' => 'gra', 'Gorai.003G067600' => 'gra', 'Gorai.005G074800' => 'gra', 'Gorai.006G087300' => 'gra', 'Gorai.008G037500' => 'gra', 'Gorai.008G181400' => 'gra', 'Gorai.009G169400' => 'gra', 'Gorai.009G387900' => 'gra', 'Gorai.010G013300' => 'gra', 'Gorai.010G153800' => 'gra', 'Gorai.010G255800' => 'gra', 'Gorai.011G043700' => 'gra', 'Gorai.011G198900' => 'gra', 'Gorai.013G168400' => 'gra', 'GSVIVG01005212001' => 'vvi', 'GSVIVG01006163001' => 'vvi', 'GSVIVG01009625001' => 'vvi', 'GSVIVG01014338001' => 'vvi', 'GSVIVG01020005001' => 'vvi', 'GSVIVG01021450001' => 'vvi', 'GSVIVG01023975001' => 'vvi', 'GSVIVG01034490001' => 'vvi', 'HanXRQChr04g0112071' => 'han', 'HanXRQChr05g0131151' => 'han', 'HanXRQChr09g0262371' => 'han', 'HanXRQChr09g0268401' => 'han', 'HanXRQChr10g0279241' => 'han', 'HanXRQChr10g0297961' => 'han', 'HanXRQChr11g0326231' => 'han', 'HanXRQChr11g0328471' => 'han', 'HanXRQChr16g0507941' => 'han', 'HanXRQChr17g0560211' => 'han', 'Haze_02108' => 'cav', 'Haze_02428' => 'cav', 'Haze_05593' => 'cav', 'Haze_06448' => 'cav', 'Haze_09427' => 'cav', 'Haze_12022' => 'cav', 'Haze_17612' => 'cav', 'Haze_17928' => 'cav', 'Hma1.2p1_0032F.1_g019250' => 'hma', 'Hma1.2p1_0163F.1_g072690' => 'hma', 'Hma1.2p1_0265F.1_g106710' => 'hma', 'Hma1.2p1_0286F.1_g113970' => 'hma', 'Hma1.2p1_0363F.1_g136640' => 'hma', 'Hma1.2p1_0584F.1_g183470' => 'hma', 'Hma1.2p1_0885F.1_g232570' => 'hma', 'HPP92_006022' => 'vpl', 'HPP92_007320' => 'vpl', 'HPP92_011521' => 'vpl', 'HPP92_019387' => 'vpl', 'HPP92_024038' => 'vpl', 'Hund05891' => 'sun', 'Hund06450' => 'sun', 'Hund12053' => 'sun', 'Hund16800' => 'sun', 'Hund21222' => 'sun', 'Hund22896' => 'sun', 'Hund23746' => 'sun', 'Hund27083' => 'sun', 'Lalb_Chr02g0141831' => 'lal', 'Lalb_Chr02g0141841' => 'lal', 'Lalb_Chr05g0220411' => 'lal', 'Lalb_Chr06g0162081' => 'lal', 'Lalb_Chr09g0327651' => 'lal', 'Lalb_Chr13g0295051' => 'lal', 'Lalb_Chr15g0086801' => 'lal', 'Lalb_Chr16g0383781' => 'lal', 'Lalb_Chr16g0383791' => 'lal', 'Lalb_Chr18g0055441' => 'lal', 'Lalb_Chr18g0059611' => 'lal', 'Lalb_Chr20g0109661' => 'lal', 'Lalb_Chr20g0109831' => 'lal', 'Lalb_Chr20g0121871' => 'lal', 'Lalb_Chr22g0355361' => 'lal', 'Lalb_Chr25g0286371' => 'lal', 'Lj1A1187G43' => 'lonja', 'Lj1A1205T50' => 'lonja', 'Lj1A800G33' => 'lonja', 'Lj1C1187T7' => 'lonja', 'Lj1C843T11' => 'lonja', 'Lj1g0010940' => 'lja', 'Lj2A288T69' => 'lonja', 'Lj3g0024276' => 'lja', 'Lj4A47T76' => 'lonja', 'Lj4g0005805' => 'lja', 'Lj4g0006097' => 'lja', 'Lj4g0008528' => 'lja', 'Lj4g0024907' => 'lja', 'Lj5g0012472' => 'lja', 'Lj5g0018648' => 'lja', 'Lj6C789G1' => 'lonja', 'Lj6g0004000' => 'lja', 'Lj7A292G67' => 'lonja', 'Lj7A292T64' => 'lonja', 'Lj9A400T58' => 'lonja', 'Lsat_1_v5_gn_1_126181' => 'lsa', 'Lsat_1_v5_gn_4_123041' => 'lsa', 'Lsat_1_v5_gn_4_133620' => 'lsa', 'Lsat_1_v5_gn_4_53221' => 'lsa', 'Lsat_1_v5_gn_4_71961' => 'lsa', 'Lsat_1_v5_gn_7_105241' => 'lsa', 'Lsat_1_v5_gn_7_21361' => 'lsa', 'Lsat_1_v5_gn_7_28860' => 'lsa', 'Lsat_1_v5_gn_7_31260' => 'lsa', 'Lsat_1_v5_gn_8_52801' => 'lsa', 'Manes.02G191400' => 'mes', 'Manes.03G110100' => 'mes', 'Manes.04G071100' => 'mes', 'Manes.05G100500' => 'mes', 'Manes.05G164700' => 'mes', 'Manes.15G087000' => 'mes', 'Manes.15G121500' => 'mes', 'Manes.16G028300' => 'mes', 'Manes.17G046100' => 'mes', 'Manes.17G069800' => 'mes', 'Manes.18G100500' => 'mes', 'Mapoly0002s0109' => 'mpo', 'Mapoly0024s0007' => 'mpo', 'Mapoly0089s0032' => 'mpo', 'MBI04_g42241_MAGBIO' => 'mbi', 'MBI05_g11988_MAGBIO' => 'mbi', 'MBI05_g35452_MAGBIO' => 'mbi', 'MBI07_g30179_MAGBIO' => 'mbi', 'MBI07_g35859_MAGBIO' => 'mbi', 'MBI07_g35860_MAGBIO' => 'mbi', 'MBI07_g37166_MAGBIO' => 'mbi', 'MBI08_g18172_MAGBIO' => 'mbi', 'MBI09_g08441_MAGBIO' => 'mbi', 'MBI13_g01676_MAGBIO' => 'mbi', 'MBI14_g42955_MAGBIO' => 'mbi', 'MBI16_g13161_MAGBIO' => 'mbi', 'MBI17_g27204_MAGBIO' => 'mbi', 'MBI19_g21595_MAGBIO' => 'mbi', 'MD00G1148400' => 'mdo', 'MD02G1301200' => 'mdo', 'MD03G1227800' => 'mdo', 'MD05G1041100' => 'mdo', 'MD05G1124800' => 'mdo', 'MD05G1284000' => 'mdo', 'MD05G1338800' => 'mdo', 'MD05G1338900' => 'mdo', 'MD07G1022800' => 'mdo', 'MD10G1047500' => 'mdo', 'MD10G1127500' => 'mdo', 'MD10G1262300' => 'mdo', 'MD10G1293800' => 'mdo', 'MD16G1074300' => 'mdo', 'Medtr1g021670' => 'mtr', 'Medtr1g096320' => 'mtr', 'Medtr2g013690' => 'mtr', 'Medtr2g019450' => 'mtr', 'Medtr2g085170' => 'mtr', 'Medtr4g088785' => 'mtr', 'Medtr8g055930' => 'mtr', 'Medtr8g085850' => 'mtr', 'MELO3C002605.2' => 'cme', 'MELO3C003891.2' => 'cme', 'MELO3C004012.2' => 'cme', 'MELO3C007134.2' => 'cme', 'MELO3C008118.2' => 'cme', 'MELO3C016700.2' => 'cme', 'MELO3C024127.2' => 'cme', 'MELO3C033361.2' => 'cme', 'MELO3C033362.2' => 'cme', 'Migut.C00430' => 'egut', 'Migut.C01246' => 'egut', 'Migut.E00101' => 'egut', 'Migut.H01486' => 'egut', 'Migut.H01939' => 'egut', 'Migut.K00360' => 'egut', 'Migut.M00910' => 'egut', 'Migut.M01139' => 'egut', 'Migut.N02677' => 'egut', 'MSTRG.13252' => 'ama', 'MSTRG.14701' => 'ama', 'MSTRG.1521' => 'ama', 'MSTRG.15884' => 'ama', 'MSTRG.16242' => 'ama', 'MSTRG.22285' => 'ama', 'MSTRG.22444' => 'ama', 'MSTRG.2349' => 'ama', 'MSTRG.26308' => 'ama', 'MSTRG.28296' => 'ama', 'MSTRG.9895' => 'ama', 'Nitab4.5_0000110g0060' => 'nta', 'Nitab4.5_0000420g0130' => 'nta', 'Nitab4.5_0000422g0030' => 'nta', 'Nitab4.5_0000560g0180' => 'nta', 'Nitab4.5_0000703g0100' => 'nta', 'Nitab4.5_0000786g0200' => 'nta', 'Nitab4.5_0001336g0020' => 'nta', 'Nitab4.5_0001796g0030' => 'nta', 'Nitab4.5_0003348g0060' => 'nta', 'Nitab4.5_0003698g0040' => 'nta', 'Nitab4.5_0003942g0090' => 'nta', 'Nitab4.5_0004775g0070' => 'nta', 'Nitab4.5_0004864g0030' => 'nta', 'Nitab4.5_0005615g0020' => 'nta', 'Nitab4.5_0009288g0030' => 'nta', 'Nitab4.5_0009341g0010' => 'nta', 'Nitab4.5_0009535g0010' => 'nta', 'Nn1g03995' => 'nnu', 'Nn1g04100' => 'nnu', 'Nn1g06530' => 'nnu', 'Nn3g16404' => 'nnu', 'Nn3g17212' => 'nnu', 'Nn3g20776' => 'nnu', 'Nn3g21923' => 'nnu', 'Nn5g27737' => 'nnu', 'Nn5g29461' => 'nnu', 'Nn7g38355' => 'nnu', 'Nn8g39873' => 'nnu', 'Oeu000548.2' => 'oeu', 'Oeu004672.1' => 'oeu', 'Oeu015605.2' => 'oeu', 'Oeu016092.1' => 'oeu', 'Oeu017879.3' => 'oeu', 'Oeu024910.1' => 'oeu', 'Oeu028965.1' => 'oeu', 'Oeu031269.1' => 'oeu', 'Oeu031270.1' => 'oeu', 'Oeu032535.1' => 'oeu', 'Oeu034151.1' => 'oeu', 'Oeu034152.1' => 'oeu', 'Oeu034588.2' => 'oeu', 'Oeu050846.1' => 'oeu', 'Oeu050849.2' => 'oeu', 'Oeu051063.2' => 'oeu', 'Oeu052368.1' => 'oeu', 'Oeu052370.1' => 'oeu', 'Os01g0210400' => 'osa', 'Os01g0304300' => 'osa', 'Os01g0749100' => 'osa', 'Os02g0745800' => 'osa', 'Os03g0769050' => 'osa', 'Os05g0531500' => 'osa', 'Os06g0724300' => 'osa', 'Os11g0198100' => 'osa', 'Peaxi162Scf00069g01425' => 'pax', 'Peaxi162Scf00280g00811' => 'pax', 'Peaxi162Scf00310g00615' => 'pax', 'Peaxi162Scf00362g00542' => 'pax', 'Peaxi162Scf00461g00310' => 'pax', 'Peaxi162Scf00530g00118' => 'pax', 'Peaxi162Scf00541g00057' => 'pax', 'Peaxi162Scf00661g00017' => 'pax', 'Peaxi162Scf00926g00027' => 'pax', 'Peaxi162Scf01064g00263' => 'pax', 'Peaxi162Scf01211g00135' => 'pax', 'PGR004G2336' => 'pgr', 'PGR042G0327' => 'pgr', 'PGR042G1957' => 'pgr', 'PGR042G2003' => 'pgr', 'PGR042G3929' => 'pgr', 'PGR083G1137' => 'pgr', 'PGR083G1364' => 'pgr', 'PGSC0003DMG400003381' => 'stu', 'PGSC0003DMG400003417' => 'stu', 'PGSC0003DMG400008981' => 'stu', 'PGSC0003DMG400012417' => 'stu', 'PGSC0003DMG400012823' => 'stu', 'PGSC0003DMG400016885' => 'stu', 'PGSC0003DMG400022812' => 'stu', 'PGSC0003DMG400029726' => 'stu', 'PGSC0003DMG401009243' => 'stu', 'PGSC0003DMG401031505' => 'stu', 'PGSC0003DMG402031505' => 'stu', 'Phvul.001G017600' => 'pvu', 'Phvul.002G193500' => 'pvu', 'Phvul.002G228900' => 'pvu', 'Phvul.002G236800' => 'pvu', 'Phvul.003G049500' => 'pvu', 'Phvul.005G072000' => 'pvu', 'Phvul.006G164800' => 'pvu', 'Phvul.006G185100' => 'pvu', 'Phvul.007G090000' => 'pvu', 'Potri.001G399800' => 'ptr', 'Potri.002G149900' => 'ptr', 'Potri.004G044100' => 'ptr', 'Potri.004G177600' => 'ptr', 'Potri.009G138000' => 'ptr', 'Potri.010G094000' => 'ptr', 'Potri.011G053000' => 'ptr', 'Potri.011G119300' => 'ptr', 'Potri.013G113700' => 'ptr', 'Potri.018G107800' => 'ptr', 'Potri.019G084100' => 'ptr', 'Pp3c14_23720' => 'ppa', 'Pp3c16_6340' => 'ppa', 'Pp3c23_13420' => 'ppa', 'Pp3c24_2740' => 'ppa', 'Pp3c25_860' => 'ppa', 'Pp3c8_21750' => 'ppa', 'Prupe.1G273000' => 'ppe', 'Prupe.1G273700' => 'ppe', 'Prupe.1G274100' => 'ppe', 'Prupe.2G023300' => 'ppe', 'Prupe.4G048000' => 'ppe', 'Prupe.4G080400' => 'ppe', 'Prupe.4G181200' => 'ppe', 'Prupe.8G056900' => 'ppe', 'Prupe.8G168700' => 'ppe', 'Psat1g189080' => 'psa', 'Psat1g204760' => 'psa', 'Psat4g175560' => 'psa', 'Psat4g177720' => 'psa', 'Psat5g244240' => 'psa', 'Psat6g010720' => 'psa', 'Psat6g187200' => 'psa', 'Psat7g072040' => 'psa', 'PSO017G3501' => 'pso', 'PSO063G2148' => 'pso', 'PSO063G5608' => 'pso', 'PSO210G6392' => 'pso', 'PSO541G2319' => 'pso', 'PSO541G2836' => 'pso', 'PSO541G4012' => 'pso', 'PSO541G6253' => 'pso', 'PSO675G0580' => 'pso', 'PSO675G0856' => 'pso', 'PSO675G5635' => 'pso', 'PSO675G9157' => 'pso', 'PSO832G1660' => 'pso', 'PSO832G1969' => 'pso', 'QL02p007186' => 'qlo', 'QL02p033904' => 'qlo', 'QL03p064391' => 'qlo', 'QL05p040593' => 'qlo', 'QL05p058242' => 'qlo', 'QL08p021825' => 'qlo', 'QL11p004981' => 'qlo', 'RcHm_v2.0_Chr1g0318301' => 'rch', 'RcHm_v2.0_Chr4g0418501' => 'rch', 'RcHm_v2.0_Chr4g0439971' => 'rch', 'RcHm_v2.0_Chr5g0008541' => 'rch', 'RcHm_v2.0_Chr5g0014101' => 'rch', 'RcHm_v2.0_Chr5g0014131' => 'rch', 'RcHm_v2.0_Chr5g0033621' => 'rch', 'RcHm_v2.0_Chr6g0272041' => 'rch', 'RcHm_v2.0_Chr6g0278831' => 'rch', 'Rhsim02G0130400' => 'rsi', 'Rhsim02G0171100' => 'rsi', 'Rhsim05G0053000' => 'rsi', 'Rhsim05G0053100' => 'rsi', 'Rhsim06G0096500' => 'rsi', 'Rhsim06G0096600' => 'rsi', 'Rhsim06G0199100' => 'rsi', 'Rhsim12G0062300' => 'rsi', 'Rhsim12G0062800' => 'rsi', 'Sabra02G0118600' => 'sbr', 'Sabra04G0027300' => 'sbr', 'Sabra04G0119500' => 'sbr', 'Sabra08G0112500' => 'sbr', 'Sabra11G0036800' => 'sbr', 'Sabra11G0103800' => 'sbr', 'Sabra13G0096300' => 'sbr', 'Sabra16G0262300' => 'sbr', 'Sabra18G0091700' => 'sbr', 'Sabra19G0095400' => 'sbr', 'SalBow6G3080' => 'sbo', 'SalBow7G1157' => 'sbo', 'SalBow7G2123' => 'sbo', 'SalBow7G2285' => 'sbo', 'SalBow7G3537' => 'sbo', 'SalBow8G2947' => 'sbo', 'SalBow8G4463' => 'sbo', 'SalBow8G5466' => 'sbo', 'Sc01g0001750' => 'sci', 'Sc02g0006640' => 'sci', 'Sc02g0006670' => 'sci', 'Sc04g0008220' => 'sci', 'Sc05g0006190' => 'sci', 'Sc08g0002760' => 'sci', 'Sc17g0006170' => 'sci', 'Sc22g0002050' => 'sci', 'Sc23g0001190' => 'sci', 'Sc24g0000980' => 'sci', 'Sed0006245' => 'sed', 'Sed0007543' => 'sed', 'Sed0009411' => 'sed', 'Sed0010765' => 'sed', 'Sed0012944' => 'sed', 'Sed0014682' => 'sed', 'Sed0016174' => 'sed', 'Sed0016796' => 'sed', 'Sed0020317' => 'sed', 'Sed0021467' => 'sed', 'SEGI_01316' => 'sgi', 'SEGI_03374' => 'sgi', 'SEGI_16265' => 'sgi', 'SEGI_18569' => 'sgi', 'SEGI_20351' => 'sgi', 'SEGI_26395' => 'sgi', 'SEGI_29469' => 'sgi', 'SEGI_34771' => 'sgi', 'SEGI_36769' => 'sgi', 'SEGI_37139' => 'sgi', 'SGA_v2.0_scaffold100G29687' => 'sas', 'SGA_v2.0_scaffold118G32472' => 'sas', 'SGA_v2.0_scaffold14G07051' => 'sas', 'SGA_v2.0_scaffold183G39845' => 'sas', 'SGA_v2.0_scaffold1G00174' => 'sas', 'SGA_v2.0_scaffold22G09714' => 'sas', 'SGA_v2.0_scaffold333G48992' => 'sas', 'SGA_v2.0_scaffold46G17491' => 'sas', 'SGA_v2.0_scaffold49G18294' => 'sas', 'SGA_v2.0_scaffold63G21658' => 'sas', 'SHI01741' => 'shi', 'SHI05771' => 'shi', 'SHI18077' => 'shi', 'SHI20525' => 'shi', 'SHI20527' => 'shi', 'SHI20528' => 'shi', 'SMO172G0185' => 'smo', 'SMO198G0020' => 'smo', 'SMO351G0006' => 'smo', 'SMO356G0118' => 'smo', 'SMO358G0296' => 'smo', 'SMO367G0079' => 'smo', 'SMO367G1277' => 'smo', 'Solyc01g014220.3' => 'sly', 'Solyc01g111770.2' => 'sly', 'Solyc02g078180.3' => 'sly', 'Solyc03g006430.3' => 'sly', 'Solyc03g006456.1' => 'sly', 'Solyc03g079860.2' => 'sly', 'Solyc04g079770.3' => 'sly', 'Solyc05g007430.4' => 'sly', 'Solyc07g063150.3' => 'sly', 'Solyc08g016620.3' => 'sly', 'Solyc09g057590.3' => 'sly', 'Solyc09g057600.1' => 'sly', 'Solyc10g009050.3' => 'sly', 'Solyc11g017420.2' => 'sly', 'Sopen01g053810' => 'spe', 'Sopen02g023040' => 'spe', 'Sopen03g002440' => 'spe', 'Sopen04g033350' => 'spe', 'Sopen05g003310' => 'spe', 'Sopen07g004050' => 'spe', 'Sopen07g031340' => 'spe', 'Sopen08g006990' => 'spe', 'Sopen10g004830' => 'spe', 'Sopen11g009370' => 'spe', 'Sp1g24450' => 'spa', 'Sp1g29670' => 'spa', 'Sp1g39600' => 'spa', 'Sp2g11080' => 'spa', 'Sp2g13970' => 'spa', 'Sp4g16130' => 'spa', 'Sp6g13080' => 'spa', 'Sp7g37270' => 'spa', 'TAR371G0065' => 'tar', 'TAR376G0340' => 'tar', 'TAR376G0435' => 'tar', 'TAR381G0002' => 'tar', 'TAR381G1236' => 'tar', 'TAR624G0055' => 'tar', 'TAR624G0324' => 'tar', 'TAR624G0696' => 'tar', 'TAR624G0906' => 'tar', 'TAR625G0107' => 'tar', 'TAR626G0015' => 'tar', 'TAR626G1356' => 'tar', 'TAR627G0888' => 'tar', 'TAR628G0399' => 'tar', 'TAR628G1327' => 'tar', 'TAR629G2831' => 'tar', 'TAR629G2874' => 'tar', 'TAR633G1432' => 'tar', 'TAR633G2771' => 'tar', 'THA.LOC104803394' => 'tha', 'THA.LOC104805153' => 'tha', 'THA.LOC104806784' => 'tha', 'THA.LOC104810473' => 'tha', 'THA.LOC104813100' => 'tha', 'THA.LOC104814215' => 'tha', 'THA.LOC104815554' => 'tha', 'THA.LOC104820544' => 'tha', 'THA.LOC104824754' => 'tha', 'THA.LOC104827717' => 'tha', 'Thecc.02G031400' => 'tca', 'Thecc.02G055900' => 'tca', 'Thecc.02G350800' => 'tca', 'Thecc.06G150900' => 'tca', 'Thecc.06G186600' => 'tca', 'Thecc.07G089600' => 'tca', 'Thecc.08G020400' => 'tca', 'Thecc.08G182100' => 'tca', 'Thhalv10000873m.g' => 'esa', 'Thhalv10004185m.g' => 'esa', 'Thhalv10006981m.g' => 'esa', 'Thhalv10007204m.g' => 'esa', 'Thhalv10011374m.g' => 'esa', 'Thhalv10013482m.g' => 'esa', 'Thhalv10017801m.g' => 'esa', 'Thhalv10024983m.g' => 'esa', 'TPR.G12072' => 'tpr', 'TPR.G15769' => 'tpr', 'TPR.G16504' => 'tpr', 'TPR.G16506' => 'tpr', 'TPR.G24345' => 'tpr', 'TPR.G26666' => 'tpr', 'TPR.G27320' => 'tpr', 'TPR.G31819' => 'tpr', 'TPR.G38879' => 'tpr', 'TPR.G39015' => 'tpr', 'TPR.G8819' => 'tpr', 'TWI09G0924' => 'twi', 'TWI12G0811' => 'twi', 'TWI12G1294' => 'twi', 'TWI31G0150' => 'twi', 'TWI36G1262' => 'twi', 'TWI38G1287' => 'twi', 'TWI38G1633' => 'twi', 'TWI38G1982' => 'twi', 'TWI39G0116' => 'twi', 'TWI60G1011' => 'twi', 'TWI63G0171' => 'twi', 'TWI73G0839' => 'twi', 'TWI79G1511' => 'twi', 'unitig_0.g915' => 'ugi', 'unitig_0.g916' => 'ugi', 'unitig_21.g20219' => 'ugi', 'unitig_21.g20416' => 'ugi', 'unitig_578.g16132' => 'ugi', 'unitig_578.g16718' => 'ugi', 'unitig_62.g23481' => 'ugi', 'unitig_744.g24535' => 'ugi', 'unitig_749.g13525' => 'ugi', 'vmacro01248' => 'vma', 'vmacro02290' => 'vma', 'vmacro10946' => 'vma', 'vmacro11865' => 'vma', 'vmacro12493' => 'vma', 'vmacro17322' => 'vma', 'vmacro21599' => 'vma', 'vmacro23041' => 'vma', 'VMungo0251G0004' => 'vmu', 'VMungo0251G2639' => 'vmu', 'VMungo0251G2967' => 'vmu', 'VMungo0540G0864' => 'vmu', 'VMungo0540G1569' => 'vmu', 'VMungo0647G0317' => 'vmu', 'VMungo0720G1373' => 'vmu', 'VMungo0720G1508' => 'vmu', 'VMungo1080G0485' => 'vmu', 'VMungo1215G3177' => 'vmu', 'Zm00001eb112600' => 'zma', 'Zm00001eb120220' => 'zma', 'Zm00001eb153240' => 'zma', 'Zm00001eb168880' => 'zma', 'Zm00001eb213920' => 'zma', 'Zm00001eb228280' => 'zma', 'Zm00001eb254580' => 'zma', 'Zm00001eb272180' => 'zma', 'Zm00001eb293190' => 'zma', 'Zm00001eb322930' => 'zma', 'Zm00001eb353360' => 'zma', 'Zm00001eb353390' => 'zma', 'Zm00001eb353430' => 'zma', 'Zm00001eb353440' => 'zma', 'Zm00001eb353780' => 'zma' ) $gf_id = 'HOM05D000499' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000499' ) $data_identifier = 'HOM05D000499' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 29, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 12, 'amhyb' => (int) 8, 'aly' => (int) 12, 'aox' => (int) 9, 'arhy' => (int) 26, 'ath' => (int) 8, 'atr' => (int) 7, 'acertr' => (int) 10, 'cqu' => (int) 15, 'bca' => (int) 29, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 11, 'cansat' => (int) 8, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 9, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 8, 'cpa' => (int) 10, 'csa' => (int) 7, 'camsi' => (int) 20, 'dca' => (int) 8, 'din' => (int) 12, 'dzi' => (int) 14, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 6, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 38, 'gra' => (int) 16, 'vvi' => (int) 8, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 5, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 11, 'lja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 11, 'mpo' => (int) 3, 'mbi' => (int) 14, 'mdo' => (int) 14, 'mtr' => (int) 8, 'cme' => (int) 9, 'egut' => (int) 9, 'ama' => (int) 11, 'nta' => (int) 17, 'nnu' => (int) 11, 'oeu' => (int) 18, 'osa' => (int) 8, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 6, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 9, 'rsi' => (int) 9, 'sbr' => (int) 10, 'sbo' => (int) 8, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 10, 'sas' => (int) 10, 'shi' => (int) 6, 'smo' => (int) 7, 'sly' => (int) 14, 'spe' => (int) 10, 'spa' => (int) 8, 'tar' => (int) 19, 'tha' => (int) 10, 'tca' => (int) 8, 'esa' => (int) 8, 'tpr' => (int) 11, 'twi' => (int) 13, 'ugi' => (int) 9, 'vma' => (int) 8, 'vmu' => (int) 10, 'zma' => (int) 15 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb353780' $species_info = array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ) $local_species = 'hma' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000499', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1066', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p29780' => 'bna', 'A02p33180' => 'bna', 'A03p16470' => 'bna', 'A03p66010' => 'bna', 'A04p25970' => 'bna', 'A06p01270' => 'bna', 'A06p46080' => 'bna', 'A07p11400' => 'bna', 'A08p01840' => 'bna', 'A08p08230' => 'bna', 'A08p25740' => 'bna', 'A09p32070' => 'bna', 'A09p37830' => 'bna', 'A09p42840' => 'bna', 'A09p42850' => 'bna', 'Aa31LG10G2060' => 'aar', 'Aa31LG2G7410' => 'aar', 'Aa31LG6G10200' => 'aar', 'Aa31LG6G16680' => 'aar', 'Aa31LG6G8470' => 'aar', 'Aa31LG9G12730' => 'aar', 'Aa31LG9G13680' => 'aar', 'Aa31LG9G14920' => 'aar', 'Aa31LG9G6650' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4977' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5467' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3254' => 'aag', 'Actinidia02578' => 'ach', 'Actinidia07693' => 'ach', 'Actinidia08413' => 'ach', 'Actinidia08414' => 'ach', 'Actinidia15289' => 'ach', 'Actinidia19871' => 'ach', 'Actinidia21475' => 'ach', 'Actinidia22576' => 'ach', 'Actinidia28327' => 'ach', 'Actinidia32491' => 'ach', 'Actinidia39463' => 'ach', 'Actinidia39571' => 'ach', 'Ah.01g013750' => 'amhyb', 'Ah.01g023210' => 'amhyb', 'Ah.04g164850' => 'amhyb', 'Ah.05g178060' => 'amhyb', 'Ah.07g204270' => 'amhyb', 'Ah.07g208480' => 'amhyb', 'Ah.09g237410' => 'amhyb', 'Ah.14g089460' => 'amhyb', 'AL1G41790' => 'aly', 'AL1G49050' => 'aly', 'AL1G53810' => 'aly', 'AL1G61400' => 'aly', 'AL4G18580' => 'aly', 'AL5G12510' => 'aly', 'AL5G12540' => 'aly', 'AL6G43230' => 'aly', 'AL7G10370' => 'aly', 'AL7G19250' => 'aly', 'AL8G12240' => 'aly', 'AL8G18540' => 'aly', 'Aqoxy1G02409' => 'aox', 'Aqoxy2G03993' => 'aox', 'Aqoxy3G03357' => 'aox', 'Aqoxy4G00785' => 'aox', 'Aqoxy5G02598' => 'aox', 'Aqoxy6G00132' => 'aox', 'Aqoxy7G01776' => 'aox', 'Aqoxy7G02316' => 'aox', 'Aqoxy7G03973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.12AFKW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B8730' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27IQR1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3F75VG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3RE0GA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41TCQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.527VTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FIR39' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5W8UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DA38EV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ63HS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H1I32C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HC27T5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4M8AP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7N3CZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9UVDZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LS1NQA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT1D4B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SKC4TM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCFV76' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF9Q1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQWD9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1ZM88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WE07RT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YCK7VH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJE6Q6' => 'arhy', 'AT1G28240' => 'ath', 'AT1G34550' => 'ath', 'AT1G53040' => 'ath', 'AT2G02910' => 'ath', 'AT4G09630' => 'ath', 'AT4G38500' => 'ath', 'AT5G42660' => 'ath', 'AT5G46220' => 'ath', 'ATR0152G026' => 'atr', 'ATR0564G343' => 'atr', 'ATR0706G151' => 'atr', 'ATR0733G207' => 'atr', 'ATR0751G234' => 'atr', 'ATR0807G048' => 'atr', 'ATR1091G084' => 'atr', 'Atru.chr10.1229' => 'acertr', 'Atru.chr10.1230' => 'acertr', 'Atru.chr10.1874' => 'acertr', 'Atru.chr11.1808' => 'acertr', 'Atru.chr13.1795' => 'acertr', 'Atru.chr13.570' => 'acertr', 'Atru.chr2.2608' => 'acertr', 'Atru.chr2.2609' => 'acertr', 'Atru.chr5.3428' => 'acertr', 'Atru.chr8.1171' => 'acertr', 'AUR62004651' => 'cqu', 'AUR62008675' => 'cqu', 'AUR62010014' => 'cqu', 'AUR62013004' => 'cqu', 'AUR62014825' => 'cqu', 'AUR62015015' => 'cqu', 'AUR62015151' => 'cqu', 'AUR62017020' => 'cqu', 'AUR62019422' => 'cqu', 'AUR62023570' => 'cqu', 'AUR62025571' => 'cqu', 'AUR62029098' => 'cqu', 'AUR62033863' => 'cqu', 'AUR62034296' => 'cqu', 'AUR62040075' => 'cqu', 'BcaB02g07334' => 'bca', 'BcaB02g10575' => 'bca', 'BcaB03g12119' => 'bca', 'BcaB03g12120' => 'bca', 'BcaB03g13945' => 'bca', 'BcaB04g17123' => 'bca', 'BcaB04g17867' => 'bca', 'BcaB04g19839' => 'bca', 'BcaB07g30317' => 'bca', 'BcaB07g32432' => 'bca', 'BcaB07g33362' => 'bca', 'BcaB08g36611' => 'bca', 'BcaC01g00028' => 'bca', 'BcaC01g01356' => 'bca', 'BcaC01g02034' => 'bca', 'BcaC01g06051' => 'bca', 'BcaC03g16839' => 'bca', 'BcaC03g17176' => 'bca', 'BcaC05g26829' => 'bca', 'BcaC06g31490' => 'bca', 'BcaC06g35344' => 'bca', 'BcaC06g36570' => 'bca', 'BcaC07g37537' => 'bca', 'BcaC08g43491' => 'bca', 'BcaC08g43773' => 'bca', 'BcaNung00234' => 'bca', 'BcaNung01982' => 'bca', 'BcaNung03707' => 'bca', 'BcaNung06454' => 'bca', 'BolC2t10762H' => 'bol', 'BolC2t11191H' => 'bol', 'BolC3t14322H' => 'bol', 'BolC3t19747H' => 'bol', 'BolC3t21425H' => 'bol', 'BolC4t27800H' => 'bol', 'BolC5t31423H' => 'bol', 'BolC6t35951H' => 'bol', 'BolC6t36282H' => 'bol', 'BolC7t40678H' => 'bol', 'BolC7t40679H' => 'bol', 'BolC7t42222H' => 'bol', 'BolC7t43492H' => 'bol', 'BolC7t46785H' => 'bol', 'BolC8t47853H' => 'bol', 'BolC9t56805H' => 'bol', 'BraA02t08000Z' => 'bra', 'BraA02t08341Z' => 'bra', 'BraA03t10936Z' => 'bra', 'BraA03t15657Z' => 'bra', 'BraA04t18100Z' => 'bra', 'BraA05t20523Z' => 'bra', 'BraA06t23353Z' => 'bra', 'BraA06t27473Z' => 'bra', 'BraA06t27769Z' => 'bra', 'BraA07t28928Z' => 'bra', 'BraA08t32236Z' => 'bra', 'BraA08t32841Z' => 'bra', 'BraA08t34524Z' => 'bra', 'BraA09t38742Z' => 'bra', 'BraA09t39295Z' => 'bra', 'C02p47180' => 'bna', 'C02p50990' => 'bna', 'C03p19360' => 'bna', 'C03p74950' => 'bna', 'C03p91000' => 'bna', 'C04p63260' => 'bna', 'C05p27050' => 'bna', 'C06p08750' => 'bna', 'C06p11490' => 'bna', 'C07p02820' => 'bna', 'C07p17180' => 'bna', 'C07p29440' => 'bna', 'C07p63730' => 'bna', 'C09p39260' => 'bna', 'CAN.G1164.34' => 'can', 'CAN.G1164.39' => 'can', 'CAN.G1530.3' => 'can', 'CAN.G162.61' => 'can', 'CAN.G176.6' => 'can', 'CAN.G289.49' => 'can', 'CAN.G370.21' => 'can', 'CAN.G370.22' => 'can', 'CAN.G371.117' => 'can', 'CAN.G58.37' => 'can', 'CAN.G588.98' => 'can', 'CANSAT21G2266' => 'cansat', 'CANSAT25G2799' => 'cansat', 'CANSAT35G0862' => 'cansat', 'CANSAT35G1704' => 'cansat', 'CANSAT35G1760' => 'cansat', 'CANSAT56G3971' => 'cansat', 'CANSAT56G4116' => 'cansat', 'CANSAT80G1259' => 'cansat', 'CARHR027730' => 'chi', 'CARHR033880' => 'chi', 'CARHR043270' => 'chi', 'CARHR145330' => 'chi', 'CARHR145340' => 'chi', 'CARHR175570' => 'chi', 'CARHR181570' => 'chi', 'CARHR258470' => 'chi', 'CARHR260490' => 'chi', 'CARHR294220' => 'chi', 'Carub.0001s2668' => 'cru', 'Carub.0001s3257' => 'cru', 'Carub.0001s4220' => 'cru', 'Carub.0005s0179' => 'cru', 'Carub.0006s2807' => 'cru', 'Carub.0007s0039' => 'cru', 'Carub.0008s0169' => 'cru', 'Carub.0008s0636' => 'cru', 'Ca_00338_v3' => 'car', 'Ca_00542_v3' => 'car', 'Ca_01844_v3' => 'car', 'Ca_10611_v3' => 'car', 'Ca_13326_v3' => 'car', 'Ca_17944_v3' => 'car', 'Ca_18546_v3' => 'car', 'Ca_24219_v3' => 'car', 'Ca_29972_v3' => 'car', 'CBR_g3681' => 'cbr', 'CBR_g40021' => 'cbr', 'Cc01_g08140' => 'ccan', 'Cc02_g13410' => 'ccan', 'Cc02_g37480' => 'ccan', 'Cc05_g12030' => 'ccan', 'Cc09_g03370' => 'ccan', 'Cc09_g10300' => 'ccan', 'Cc10_g03530' => 'ccan', 'Cc10_g11380' => 'ccan', 'CDE01G0176' => 'cde', 'CDE02G0675' => 'cde', 'CDE02G0942' => 'cde', 'CDE02G1153' => 'cde', 'CDE02G4177' => 'cde', 'CDE04G2117' => 'cde', 'CDE04G2736' => 'cde', 'CDE08G1161' => 'cde', 'CDE09G1238' => 'cde', 'Cfa000467' => 'cfa', 'Cfa000947' => 'cfa', 'Cfa004969' => 'cfa', 'Cfa005284' => 'cfa', 'Cfa008993' => 'cfa', 'Cfa018187' => 'cfa', 'Cfa018454' => 'cfa', 'Cfa020585' => 'cfa', 'Ciclev10000424m.g' => 'ccl', 'Ciclev10003605m.g' => 'ccl', 'Ciclev10007828m.g' => 'ccl', 'Ciclev10014620m.g' => 'ccl', 'Ciclev10015169m.g' => 'ccl', 'Ciclev10018291m.g' => 'ccl', 'Ciclev10028256m.g' => 'ccl', 'Ciclev10033822m.g' => 'ccl', 'CiPaw.05G060300' => 'cil', 'CiPaw.05G085000' => 'cil', 'CiPaw.06G083700' => 'cil', 'CiPaw.06G120300' => 'cil', 'CiPaw.09G060500' => 'cil', 'CiPaw.09G123800' => 'cil', 'CiPaw.11G169700' => 'cil', 'CiPaw.12G118300' => 'cil', 'CiPaw.15G071000' => 'cil', 'CiPaw.15G081900' => 'cil', 'ClCG01G024610' => 'cla', 'ClCG03G006070' => 'cla', 'ClCG05G019250' => 'cla', 'ClCG09G009500' => 'cla', 'ClCG11G008200' => 'cla', 'ClCG11G018080' => 'cla', 'COL.COLO4_17373' => 'col', 'COL.COLO4_22994' => 'col', 'COL.COLO4_26389' => 'col', 'COL.COLO4_27170' => 'col', 'COL.COLO4_31074' => 'col', 'COL.COLO4_31465' => 'col', 'COL.COLO4_36438' => 'col', 'COL.COLO4_36439' => 'col', 'Cpa.g.c38781' => 'cpa', 'Cpa.g.sc128.12' => 'cpa', 'Cpa.g.sc166.7' => 'cpa', 'Cpa.g.sc166.8' => 'cpa', 'Cpa.g.sc20.111' => 'cpa', 'Cpa.g.sc27.31' => 'cpa', 'Cpa.g.sc64.36' => 'cpa', 'Cpa.g.sc64.37' => 'cpa', 'Cpa.g.sc66.49' => 'cpa', 'Cpa.g.sc80.64' => 'cpa', 'CsaV3_1G012320' => 'csa', 'CsaV3_2G008480' => 'csa', 'CsaV3_2G033450' => 'csa', 'CsaV3_3G044830' => 'csa', 'CsaV3_4G033710' => 'csa', 'CsaV3_6G051730' => 'csa', 'CsaV3_7G025350' => 'csa', 'CSS0001067' => 'camsi', 'CSS0005996' => 'camsi', 'CSS0006590' => 'camsi', 'CSS0009673' => 'camsi', 'CSS0010201' => 'camsi', 'CSS0010549' => 'camsi', 'CSS0011364' => 'camsi', 'CSS0014473' => 'camsi', 'CSS0014961' => 'camsi', 'CSS0020191' => 'camsi', 'CSS0021165' => 'camsi', 'CSS0022306' => 'camsi', 'CSS0030591' => 'camsi', 'CSS0030696' => 'camsi', 'CSS0032653' => 'camsi', 'CSS0037487' => 'camsi', 'CSS0041102' => 'camsi', 'CSS0041261' => 'camsi', 'CSS0046246' => 'camsi', 'CSS0049256' => 'camsi', 'DCAR_004075' => 'dca', 'DCAR_011538' => 'dca', 'DCAR_019553' => 'dca', 'DCAR_020952' => 'dca', 'DCAR_021739' => 'dca', 'DCAR_027407' => 'dca', 'DCAR_027913' => 'dca', 'DCAR_028066' => 'dca', 'Dinv05899' => 'din', 'Dinv07563' => 'din', 'Dinv08010' => 'din', 'Dinv14125' => 'din', 'Dinv20172' => 'din', 'Dinv30743' => 'din', 'Dinv31229' => 'din', 'Dinv34162' => 'din', 'Dinv36028' => 'din', 'Dinv39368' => 'din', 'Dinv40565' => 'din', 'Dinv41706' => 'din', 'Duzib052G0089' => 'dzi', 'Duzib116G0641' => 'dzi', 'Duzib132G0069' => 'dzi', 'Duzib132G1219' => 'dzi', 'Duzib147G0278' => 'dzi', 'Duzib160G0480' => 'dzi', 'Duzib170G0661' => 'dzi', 'Duzib177G0591' => 'dzi', 'Duzib187G1353' => 'dzi', 'Duzib192G0858' => 'dzi', 'Duzib192G0883' => 'dzi', 'Duzib213G0506' => 'dzi', 'Duzib235G0289' => 'dzi', 'Duzib251G0422' => 'dzi', 'ECA232G3898' => 'eca', 'ECA233G5950' => 'eca', 'ECA234G1699' => 'eca', 'ECA234G2421' => 'eca', 'ECA236G0426' => 'eca', 'ECA236G4331' => 'eca', 'ECA248G2573' => 'eca', 'EL10Ac1g00077' => 'bvu', 'EL10Ac1g01746' => 'bvu', 'EL10Ac2g03464' => 'bvu', 'EL10Ac4g08176' => 'bvu', 'EL10Ac7g17521' => 'bvu', 'EL10Ac8g20386' => 'bvu', 'EL10Ac9g21343' => 'bvu', 'EL10Ac9g22688' => 'bvu', 'Eucgr.B03434' => 'egr', 'Eucgr.D00618' => 'egr', 'Eucgr.E02395' => 'egr', 'Eucgr.F01129' => 'egr', 'Eucgr.F02622' => 'egr', 'Eucgr.F04207' => 'egr', 'FAN01G0570' => 'fan', 'FAN03G3351' => 'fan', 'FAN06G3702' => 'fan', 'FAN07G2149' => 'fan', 'FAN10G3758' => 'fan', 'FAN11G1170' => 'fan', 'FAN11G2050' => 'fan', 'FAN11G2724' => 'fan', 'FAN12G1700' => 'fan', 'FAN12G2028' => 'fan', 'FAN15G1160' => 'fan', 'FAN15G3063' => 'fan', 'FAN16G2540' => 'fan', 'FAN16G3077' => 'fan', 'FAN16G3624' => 'fan', 'FAN17G0221' => 'fan', 'FAN20G2492' => 'fan', 'FAN20G2905' => 'fan', 'FAN21G0548' => 'fan', 'FAN21G1300' => 'fan', 'FAN22G0077' => 'fan', 'FAN22G1315' => 'fan', 'FAN24G1280' => 'fan', 'FAN24G1445' => 'fan', 'FAN24G3527' => 'fan', 'FAN25G0464' => 'fan', 'FAN25G2885' => 'fan', 'FAN25G3270' => 'fan', 'FAN27G1101' => 'fan', 'FAN27G2846' => 'fan', 'FAN27G3524' => 'fan', 'FvH4_2g11770' => 'fve', 'FvH4_2g15630' => 'fve', 'FvH4_3g05570' => 'fve', 'FvH4_3g09110' => 'fve', 'FvH4_3g19940' => 'fve', 'FvH4_4g04821' => 'fve', 'FvH4_4g31480' => 'fve', 'FvH4_7g01740' => 'fve', 'Glyma.05G130400' => 'gma', 'Glyma.05G156400' => 'gma', 'Glyma.07G197000' => 'gma', 'Glyma.08G085151' => 'gma', 'Glyma.08G114500' => 'gma', 'Glyma.08G300400' => 'gma', 'Glyma.10G215800' => 'gma', 'Glyma.12G224400' => 'gma', 'Glyma.13G179300' => 'gma', 'Glyma.13G218151' => 'gma', 'Glyma.13G238800' => 'gma', 'Glyma.13G276900' => 'gma', 'Glyma.14G078200' => 'gma', 'Glyma.15G074500' => 'gma', 'Glyma.15G094100' => 'gma', 'Glyma.17G247200' => 'gma', 'Glyma.18G120100' => 'gma', 'Glyma.20G176000' => 'gma', 'Gohir.A01G063600' => 'ghi', 'Gohir.A01G170301' => 'ghi', 'Gohir.A02G060500' => 'ghi', 'Gohir.A05G133850' => 'ghi', 'Gohir.A05G161400' => 'ghi', 'Gohir.A06G012900' => 'ghi', 'Gohir.A06G035901' => 'ghi', 'Gohir.A06G127100' => 'ghi', 'Gohir.A06G210500' => 'ghi', 'Gohir.A08G008650' => 'ghi', 'Gohir.A09G072700' => 'ghi', 'Gohir.A09G088301' => 'ghi', 'Gohir.A10G040600' => 'ghi', 'Gohir.A12G036300' => 'ghi', 'Gohir.A12G143350' => 'ghi', 'Gohir.A12G165500' => 'ghi', 'Gohir.A13G145700' => 'ghi', 'Gohir.D01G050000' => 'ghi', 'Gohir.D01G051366' => 'ghi', 'Gohir.D01G161350' => 'ghi', 'Gohir.D02G065900' => 'ghi', 'Gohir.D05G164200' => 'ghi', 'Gohir.D05G355500' => 'ghi', 'Gohir.D06G010400' => 'ghi', 'Gohir.D06G111250' => 'ghi', 'Gohir.D06G132000' => 'ghi', 'Gohir.D06G210500' => 'ghi', 'Gohir.D07G165675' => 'ghi', 'Gohir.D08G062240' => 'ghi', 'Gohir.D08G086101' => 'ghi', 'Gohir.D08G138060' => 'ghi', 'Gohir.D09G072300' => 'ghi', 'Gohir.D10G041400' => 'ghi', 'Gohir.D11G191020' => 'ghi', 'Gohir.D11G212066' => 'ghi', 'Gohir.D12G036300' => 'ghi', 'Gohir.D12G168600' => 'ghi', 'Gohir.D13G150600' => 'ghi', 'Gorai.001G057300' => 'gra', 'Gorai.002G069900' => 'gra', 'Gorai.002G200000' => 'gra', 'Gorai.003G067600' => 'gra', 'Gorai.005G074800' => 'gra', 'Gorai.006G087300' => 'gra', 'Gorai.008G037500' => 'gra', 'Gorai.008G181400' => 'gra', 'Gorai.009G169400' => 'gra', 'Gorai.009G387900' => 'gra', 'Gorai.010G013300' => 'gra', 'Gorai.010G153800' => 'gra', 'Gorai.010G255800' => 'gra', 'Gorai.011G043700' => 'gra', 'Gorai.011G198900' => 'gra', 'Gorai.013G168400' => 'gra', 'GSVIVG01005212001' => 'vvi', 'GSVIVG01006163001' => 'vvi', 'GSVIVG01009625001' => 'vvi', 'GSVIVG01014338001' => 'vvi', 'GSVIVG01020005001' => 'vvi', 'GSVIVG01021450001' => 'vvi', 'GSVIVG01023975001' => 'vvi', 'GSVIVG01034490001' => 'vvi', 'HanXRQChr04g0112071' => 'han', 'HanXRQChr05g0131151' => 'han', 'HanXRQChr09g0262371' => 'han', 'HanXRQChr09g0268401' => 'han', 'HanXRQChr10g0279241' => 'han', 'HanXRQChr10g0297961' => 'han', 'HanXRQChr11g0326231' => 'han', 'HanXRQChr11g0328471' => 'han', 'HanXRQChr16g0507941' => 'han', 'HanXRQChr17g0560211' => 'han', 'Haze_02108' => 'cav', 'Haze_02428' => 'cav', 'Haze_05593' => 'cav', 'Haze_06448' => 'cav', 'Haze_09427' => 'cav', 'Haze_12022' => 'cav', 'Haze_17612' => 'cav', 'Haze_17928' => 'cav', 'Hma1.2p1_0032F.1_g019250' => 'hma', 'Hma1.2p1_0163F.1_g072690' => 'hma', 'Hma1.2p1_0265F.1_g106710' => 'hma', 'Hma1.2p1_0286F.1_g113970' => 'hma', 'Hma1.2p1_0363F.1_g136640' => 'hma', 'Hma1.2p1_0584F.1_g183470' => 'hma', 'Hma1.2p1_0885F.1_g232570' => 'hma', 'HPP92_006022' => 'vpl', 'HPP92_007320' => 'vpl', 'HPP92_011521' => 'vpl', 'HPP92_019387' => 'vpl', 'HPP92_024038' => 'vpl', 'Hund05891' => 'sun', 'Hund06450' => 'sun', 'Hund12053' => 'sun', 'Hund16800' => 'sun', 'Hund21222' => 'sun', 'Hund22896' => 'sun', 'Hund23746' => 'sun', 'Hund27083' => 'sun', 'Lalb_Chr02g0141831' => 'lal', 'Lalb_Chr02g0141841' => 'lal', 'Lalb_Chr05g0220411' => 'lal', 'Lalb_Chr06g0162081' => 'lal', 'Lalb_Chr09g0327651' => 'lal', 'Lalb_Chr13g0295051' => 'lal', 'Lalb_Chr15g0086801' => 'lal', 'Lalb_Chr16g0383781' => 'lal', 'Lalb_Chr16g0383791' => 'lal', 'Lalb_Chr18g0055441' => 'lal', 'Lalb_Chr18g0059611' => 'lal', 'Lalb_Chr20g0109661' => 'lal', 'Lalb_Chr20g0109831' => 'lal', 'Lalb_Chr20g0121871' => 'lal', 'Lalb_Chr22g0355361' => 'lal', 'Lalb_Chr25g0286371' => 'lal', 'Lj1A1187G43' => 'lonja', 'Lj1A1205T50' => 'lonja', 'Lj1A800G33' => 'lonja', 'Lj1C1187T7' => 'lonja', 'Lj1C843T11' => 'lonja', 'Lj1g0010940' => 'lja', 'Lj2A288T69' => 'lonja', 'Lj3g0024276' => 'lja', 'Lj4A47T76' => 'lonja', 'Lj4g0005805' => 'lja', 'Lj4g0006097' => 'lja', 'Lj4g0008528' => 'lja', 'Lj4g0024907' => 'lja', 'Lj5g0012472' => 'lja', 'Lj5g0018648' => 'lja', 'Lj6C789G1' => 'lonja', 'Lj6g0004000' => 'lja', 'Lj7A292G67' => 'lonja', 'Lj7A292T64' => 'lonja', 'Lj9A400T58' => 'lonja', 'Lsat_1_v5_gn_1_126181' => 'lsa', 'Lsat_1_v5_gn_4_123041' => 'lsa', 'Lsat_1_v5_gn_4_133620' => 'lsa', 'Lsat_1_v5_gn_4_53221' => 'lsa', 'Lsat_1_v5_gn_4_71961' => 'lsa', 'Lsat_1_v5_gn_7_105241' => 'lsa', 'Lsat_1_v5_gn_7_21361' => 'lsa', 'Lsat_1_v5_gn_7_28860' => 'lsa', 'Lsat_1_v5_gn_7_31260' => 'lsa', 'Lsat_1_v5_gn_8_52801' => 'lsa', 'Manes.02G191400' => 'mes', 'Manes.03G110100' => 'mes', 'Manes.04G071100' => 'mes', 'Manes.05G100500' => 'mes', 'Manes.05G164700' => 'mes', 'Manes.15G087000' => 'mes', 'Manes.15G121500' => 'mes', 'Manes.16G028300' => 'mes', 'Manes.17G046100' => 'mes', 'Manes.17G069800' => 'mes', 'Manes.18G100500' => 'mes', 'Mapoly0002s0109' => 'mpo', 'Mapoly0024s0007' => 'mpo', 'Mapoly0089s0032' => 'mpo', 'MBI04_g42241_MAGBIO' => 'mbi', 'MBI05_g11988_MAGBIO' => 'mbi', 'MBI05_g35452_MAGBIO' => 'mbi', 'MBI07_g30179_MAGBIO' => 'mbi', 'MBI07_g35859_MAGBIO' => 'mbi', 'MBI07_g35860_MAGBIO' => 'mbi', 'MBI07_g37166_MAGBIO' => 'mbi', 'MBI08_g18172_MAGBIO' => 'mbi', 'MBI09_g08441_MAGBIO' => 'mbi', 'MBI13_g01676_MAGBIO' => 'mbi', 'MBI14_g42955_MAGBIO' => 'mbi', 'MBI16_g13161_MAGBIO' => 'mbi', 'MBI17_g27204_MAGBIO' => 'mbi', 'MBI19_g21595_MAGBIO' => 'mbi', 'MD00G1148400' => 'mdo', 'MD02G1301200' => 'mdo', 'MD03G1227800' => 'mdo', 'MD05G1041100' => 'mdo', 'MD05G1124800' => 'mdo', 'MD05G1284000' => 'mdo', 'MD05G1338800' => 'mdo', 'MD05G1338900' => 'mdo', 'MD07G1022800' => 'mdo', 'MD10G1047500' => 'mdo', 'MD10G1127500' => 'mdo', 'MD10G1262300' => 'mdo', 'MD10G1293800' => 'mdo', 'MD16G1074300' => 'mdo', 'Medtr1g021670' => 'mtr', 'Medtr1g096320' => 'mtr', 'Medtr2g013690' => 'mtr', 'Medtr2g019450' => 'mtr', 'Medtr2g085170' => 'mtr', 'Medtr4g088785' => 'mtr', 'Medtr8g055930' => 'mtr', 'Medtr8g085850' => 'mtr', 'MELO3C002605.2' => 'cme', 'MELO3C003891.2' => 'cme', 'MELO3C004012.2' => 'cme', 'MELO3C007134.2' => 'cme', 'MELO3C008118.2' => 'cme', 'MELO3C016700.2' => 'cme', 'MELO3C024127.2' => 'cme', 'MELO3C033361.2' => 'cme', 'MELO3C033362.2' => 'cme', 'Migut.C00430' => 'egut', 'Migut.C01246' => 'egut', 'Migut.E00101' => 'egut', 'Migut.H01486' => 'egut', 'Migut.H01939' => 'egut', 'Migut.K00360' => 'egut', 'Migut.M00910' => 'egut', 'Migut.M01139' => 'egut', 'Migut.N02677' => 'egut', 'MSTRG.13252' => 'ama', 'MSTRG.14701' => 'ama', 'MSTRG.1521' => 'ama', 'MSTRG.15884' => 'ama', 'MSTRG.16242' => 'ama', 'MSTRG.22285' => 'ama', 'MSTRG.22444' => 'ama', 'MSTRG.2349' => 'ama', 'MSTRG.26308' => 'ama', 'MSTRG.28296' => 'ama', 'MSTRG.9895' => 'ama', 'Nitab4.5_0000110g0060' => 'nta', 'Nitab4.5_0000420g0130' => 'nta', 'Nitab4.5_0000422g0030' => 'nta', 'Nitab4.5_0000560g0180' => 'nta', 'Nitab4.5_0000703g0100' => 'nta', 'Nitab4.5_0000786g0200' => 'nta', 'Nitab4.5_0001336g0020' => 'nta', 'Nitab4.5_0001796g0030' => 'nta', 'Nitab4.5_0003348g0060' => 'nta', 'Nitab4.5_0003698g0040' => 'nta', 'Nitab4.5_0003942g0090' => 'nta', 'Nitab4.5_0004775g0070' => 'nta', 'Nitab4.5_0004864g0030' => 'nta', 'Nitab4.5_0005615g0020' => 'nta', 'Nitab4.5_0009288g0030' => 'nta', 'Nitab4.5_0009341g0010' => 'nta', 'Nitab4.5_0009535g0010' => 'nta', 'Nn1g03995' => 'nnu', 'Nn1g04100' => 'nnu', 'Nn1g06530' => 'nnu', 'Nn3g16404' => 'nnu', 'Nn3g17212' => 'nnu', 'Nn3g20776' => 'nnu', 'Nn3g21923' => 'nnu', 'Nn5g27737' => 'nnu', 'Nn5g29461' => 'nnu', 'Nn7g38355' => 'nnu', 'Nn8g39873' => 'nnu', 'Oeu000548.2' => 'oeu', 'Oeu004672.1' => 'oeu', 'Oeu015605.2' => 'oeu', 'Oeu016092.1' => 'oeu', 'Oeu017879.3' => 'oeu', 'Oeu024910.1' => 'oeu', 'Oeu028965.1' => 'oeu', 'Oeu031269.1' => 'oeu', 'Oeu031270.1' => 'oeu', 'Oeu032535.1' => 'oeu', 'Oeu034151.1' => 'oeu', 'Oeu034152.1' => 'oeu', 'Oeu034588.2' => 'oeu', 'Oeu050846.1' => 'oeu', 'Oeu050849.2' => 'oeu', 'Oeu051063.2' => 'oeu', 'Oeu052368.1' => 'oeu', 'Oeu052370.1' => 'oeu', 'Os01g0210400' => 'osa', 'Os01g0304300' => 'osa', 'Os01g0749100' => 'osa', 'Os02g0745800' => 'osa', 'Os03g0769050' => 'osa', 'Os05g0531500' => 'osa', 'Os06g0724300' => 'osa', 'Os11g0198100' => 'osa', 'Peaxi162Scf00069g01425' => 'pax', 'Peaxi162Scf00280g00811' => 'pax', 'Peaxi162Scf00310g00615' => 'pax', 'Peaxi162Scf00362g00542' => 'pax', 'Peaxi162Scf00461g00310' => 'pax', 'Peaxi162Scf00530g00118' => 'pax', 'Peaxi162Scf00541g00057' => 'pax', 'Peaxi162Scf00661g00017' => 'pax', 'Peaxi162Scf00926g00027' => 'pax', 'Peaxi162Scf01064g00263' => 'pax', 'Peaxi162Scf01211g00135' => 'pax', 'PGR004G2336' => 'pgr', 'PGR042G0327' => 'pgr', 'PGR042G1957' => 'pgr', 'PGR042G2003' => 'pgr', 'PGR042G3929' => 'pgr', 'PGR083G1137' => 'pgr', 'PGR083G1364' => 'pgr', 'PGSC0003DMG400003381' => 'stu', 'PGSC0003DMG400003417' => 'stu', 'PGSC0003DMG400008981' => 'stu', 'PGSC0003DMG400012417' => 'stu', 'PGSC0003DMG400012823' => 'stu', 'PGSC0003DMG400016885' => 'stu', 'PGSC0003DMG400022812' => 'stu', 'PGSC0003DMG400029726' => 'stu', 'PGSC0003DMG401009243' => 'stu', 'PGSC0003DMG401031505' => 'stu', 'PGSC0003DMG402031505' => 'stu', 'Phvul.001G017600' => 'pvu', 'Phvul.002G193500' => 'pvu', 'Phvul.002G228900' => 'pvu', 'Phvul.002G236800' => 'pvu', 'Phvul.003G049500' => 'pvu', 'Phvul.005G072000' => 'pvu', 'Phvul.006G164800' => 'pvu', 'Phvul.006G185100' => 'pvu', 'Phvul.007G090000' => 'pvu', 'Potri.001G399800' => 'ptr', 'Potri.002G149900' => 'ptr', 'Potri.004G044100' => 'ptr', 'Potri.004G177600' => 'ptr', 'Potri.009G138000' => 'ptr', 'Potri.010G094000' => 'ptr', 'Potri.011G053000' => 'ptr', 'Potri.011G119300' => 'ptr', 'Potri.013G113700' => 'ptr', 'Potri.018G107800' => 'ptr', 'Potri.019G084100' => 'ptr', 'Pp3c14_23720' => 'ppa', 'Pp3c16_6340' => 'ppa', 'Pp3c23_13420' => 'ppa', 'Pp3c24_2740' => 'ppa', 'Pp3c25_860' => 'ppa', 'Pp3c8_21750' => 'ppa', 'Prupe.1G273000' => 'ppe', 'Prupe.1G273700' => 'ppe', 'Prupe.1G274100' => 'ppe', 'Prupe.2G023300' => 'ppe', 'Prupe.4G048000' => 'ppe', 'Prupe.4G080400' => 'ppe', 'Prupe.4G181200' => 'ppe', 'Prupe.8G056900' => 'ppe', 'Prupe.8G168700' => 'ppe', 'Psat1g189080' => 'psa', 'Psat1g204760' => 'psa', 'Psat4g175560' => 'psa', 'Psat4g177720' => 'psa', 'Psat5g244240' => 'psa', 'Psat6g010720' => 'psa', 'Psat6g187200' => 'psa', 'Psat7g072040' => 'psa', 'PSO017G3501' => 'pso', 'PSO063G2148' => 'pso', 'PSO063G5608' => 'pso', 'PSO210G6392' => 'pso', 'PSO541G2319' => 'pso', 'PSO541G2836' => 'pso', 'PSO541G4012' => 'pso', 'PSO541G6253' => 'pso', 'PSO675G0580' => 'pso', 'PSO675G0856' => 'pso', 'PSO675G5635' => 'pso', 'PSO675G9157' => 'pso', 'PSO832G1660' => 'pso', 'PSO832G1969' => 'pso', 'QL02p007186' => 'qlo', 'QL02p033904' => 'qlo', 'QL03p064391' => 'qlo', 'QL05p040593' => 'qlo', 'QL05p058242' => 'qlo', 'QL08p021825' => 'qlo', 'QL11p004981' => 'qlo', 'RcHm_v2.0_Chr1g0318301' => 'rch', 'RcHm_v2.0_Chr4g0418501' => 'rch', 'RcHm_v2.0_Chr4g0439971' => 'rch', 'RcHm_v2.0_Chr5g0008541' => 'rch', 'RcHm_v2.0_Chr5g0014101' => 'rch', 'RcHm_v2.0_Chr5g0014131' => 'rch', 'RcHm_v2.0_Chr5g0033621' => 'rch', 'RcHm_v2.0_Chr6g0272041' => 'rch', 'RcHm_v2.0_Chr6g0278831' => 'rch', 'Rhsim02G0130400' => 'rsi', 'Rhsim02G0171100' => 'rsi', 'Rhsim05G0053000' => 'rsi', 'Rhsim05G0053100' => 'rsi', 'Rhsim06G0096500' => 'rsi', 'Rhsim06G0096600' => 'rsi', 'Rhsim06G0199100' => 'rsi', 'Rhsim12G0062300' => 'rsi', 'Rhsim12G0062800' => 'rsi', 'Sabra02G0118600' => 'sbr', 'Sabra04G0027300' => 'sbr', 'Sabra04G0119500' => 'sbr', 'Sabra08G0112500' => 'sbr', 'Sabra11G0036800' => 'sbr', 'Sabra11G0103800' => 'sbr', 'Sabra13G0096300' => 'sbr', 'Sabra16G0262300' => 'sbr', 'Sabra18G0091700' => 'sbr', 'Sabra19G0095400' => 'sbr', 'SalBow6G3080' => 'sbo', 'SalBow7G1157' => 'sbo', 'SalBow7G2123' => 'sbo', 'SalBow7G2285' => 'sbo', 'SalBow7G3537' => 'sbo', 'SalBow8G2947' => 'sbo', 'SalBow8G4463' => 'sbo', 'SalBow8G5466' => 'sbo', 'Sc01g0001750' => 'sci', 'Sc02g0006640' => 'sci', 'Sc02g0006670' => 'sci', 'Sc04g0008220' => 'sci', 'Sc05g0006190' => 'sci', 'Sc08g0002760' => 'sci', 'Sc17g0006170' => 'sci', 'Sc22g0002050' => 'sci', 'Sc23g0001190' => 'sci', 'Sc24g0000980' => 'sci', 'Sed0006245' => 'sed', 'Sed0007543' => 'sed', 'Sed0009411' => 'sed', 'Sed0010765' => 'sed', 'Sed0012944' => 'sed', 'Sed0014682' => 'sed', 'Sed0016174' => 'sed', 'Sed0016796' => 'sed', 'Sed0020317' => 'sed', 'Sed0021467' => 'sed', 'SEGI_01316' => 'sgi', 'SEGI_03374' => 'sgi', 'SEGI_16265' => 'sgi', 'SEGI_18569' => 'sgi', 'SEGI_20351' => 'sgi', 'SEGI_26395' => 'sgi', 'SEGI_29469' => 'sgi', 'SEGI_34771' => 'sgi', 'SEGI_36769' => 'sgi', 'SEGI_37139' => 'sgi', 'SGA_v2.0_scaffold100G29687' => 'sas', 'SGA_v2.0_scaffold118G32472' => 'sas', 'SGA_v2.0_scaffold14G07051' => 'sas', 'SGA_v2.0_scaffold183G39845' => 'sas', 'SGA_v2.0_scaffold1G00174' => 'sas', 'SGA_v2.0_scaffold22G09714' => 'sas', 'SGA_v2.0_scaffold333G48992' => 'sas', 'SGA_v2.0_scaffold46G17491' => 'sas', 'SGA_v2.0_scaffold49G18294' => 'sas', 'SGA_v2.0_scaffold63G21658' => 'sas', 'SHI01741' => 'shi', 'SHI05771' => 'shi', 'SHI18077' => 'shi', 'SHI20525' => 'shi', 'SHI20527' => 'shi', 'SHI20528' => 'shi', 'SMO172G0185' => 'smo', 'SMO198G0020' => 'smo', 'SMO351G0006' => 'smo', 'SMO356G0118' => 'smo', 'SMO358G0296' => 'smo', 'SMO367G0079' => 'smo', 'SMO367G1277' => 'smo', 'Solyc01g014220.3' => 'sly', 'Solyc01g111770.2' => 'sly', 'Solyc02g078180.3' => 'sly', 'Solyc03g006430.3' => 'sly', 'Solyc03g006456.1' => 'sly', 'Solyc03g079860.2' => 'sly', 'Solyc04g079770.3' => 'sly', 'Solyc05g007430.4' => 'sly', 'Solyc07g063150.3' => 'sly', 'Solyc08g016620.3' => 'sly', 'Solyc09g057590.3' => 'sly', 'Solyc09g057600.1' => 'sly', 'Solyc10g009050.3' => 'sly', 'Solyc11g017420.2' => 'sly', 'Sopen01g053810' => 'spe', 'Sopen02g023040' => 'spe', 'Sopen03g002440' => 'spe', 'Sopen04g033350' => 'spe', 'Sopen05g003310' => 'spe', 'Sopen07g004050' => 'spe', 'Sopen07g031340' => 'spe', 'Sopen08g006990' => 'spe', 'Sopen10g004830' => 'spe', 'Sopen11g009370' => 'spe', 'Sp1g24450' => 'spa', 'Sp1g29670' => 'spa', 'Sp1g39600' => 'spa', 'Sp2g11080' => 'spa', 'Sp2g13970' => 'spa', 'Sp4g16130' => 'spa', 'Sp6g13080' => 'spa', 'Sp7g37270' => 'spa', 'TAR371G0065' => 'tar', 'TAR376G0340' => 'tar', 'TAR376G0435' => 'tar', 'TAR381G0002' => 'tar', 'TAR381G1236' => 'tar', 'TAR624G0055' => 'tar', 'TAR624G0324' => 'tar', 'TAR624G0696' => 'tar', 'TAR624G0906' => 'tar', 'TAR625G0107' => 'tar', 'TAR626G0015' => 'tar', 'TAR626G1356' => 'tar', 'TAR627G0888' => 'tar', 'TAR628G0399' => 'tar', 'TAR628G1327' => 'tar', 'TAR629G2831' => 'tar', 'TAR629G2874' => 'tar', 'TAR633G1432' => 'tar', 'TAR633G2771' => 'tar', 'THA.LOC104803394' => 'tha', 'THA.LOC104805153' => 'tha', 'THA.LOC104806784' => 'tha', 'THA.LOC104810473' => 'tha', 'THA.LOC104813100' => 'tha', 'THA.LOC104814215' => 'tha', 'THA.LOC104815554' => 'tha', 'THA.LOC104820544' => 'tha', 'THA.LOC104824754' => 'tha', 'THA.LOC104827717' => 'tha', 'Thecc.02G031400' => 'tca', 'Thecc.02G055900' => 'tca', 'Thecc.02G350800' => 'tca', 'Thecc.06G150900' => 'tca', 'Thecc.06G186600' => 'tca', 'Thecc.07G089600' => 'tca', 'Thecc.08G020400' => 'tca', 'Thecc.08G182100' => 'tca', 'Thhalv10000873m.g' => 'esa', 'Thhalv10004185m.g' => 'esa', 'Thhalv10006981m.g' => 'esa', 'Thhalv10007204m.g' => 'esa', 'Thhalv10011374m.g' => 'esa', 'Thhalv10013482m.g' => 'esa', 'Thhalv10017801m.g' => 'esa', 'Thhalv10024983m.g' => 'esa', 'TPR.G12072' => 'tpr', 'TPR.G15769' => 'tpr', 'TPR.G16504' => 'tpr', 'TPR.G16506' => 'tpr', 'TPR.G24345' => 'tpr', 'TPR.G26666' => 'tpr', 'TPR.G27320' => 'tpr', 'TPR.G31819' => 'tpr', 'TPR.G38879' => 'tpr', 'TPR.G39015' => 'tpr', 'TPR.G8819' => 'tpr', 'TWI09G0924' => 'twi', 'TWI12G0811' => 'twi', 'TWI12G1294' => 'twi', 'TWI31G0150' => 'twi', 'TWI36G1262' => 'twi', 'TWI38G1287' => 'twi', 'TWI38G1633' => 'twi', 'TWI38G1982' => 'twi', 'TWI39G0116' => 'twi', 'TWI60G1011' => 'twi', 'TWI63G0171' => 'twi', 'TWI73G0839' => 'twi', 'TWI79G1511' => 'twi', 'unitig_0.g915' => 'ugi', 'unitig_0.g916' => 'ugi', 'unitig_21.g20219' => 'ugi', 'unitig_21.g20416' => 'ugi', 'unitig_578.g16132' => 'ugi', 'unitig_578.g16718' => 'ugi', 'unitig_62.g23481' => 'ugi', 'unitig_744.g24535' => 'ugi', 'unitig_749.g13525' => 'ugi', 'vmacro01248' => 'vma', 'vmacro02290' => 'vma', 'vmacro10946' => 'vma', 'vmacro11865' => 'vma', 'vmacro12493' => 'vma', 'vmacro17322' => 'vma', 'vmacro21599' => 'vma', 'vmacro23041' => 'vma', 'VMungo0251G0004' => 'vmu', 'VMungo0251G2639' => 'vmu', 'VMungo0251G2967' => 'vmu', 'VMungo0540G0864' => 'vmu', 'VMungo0540G1569' => 'vmu', 'VMungo0647G0317' => 'vmu', 'VMungo0720G1373' => 'vmu', 'VMungo0720G1508' => 'vmu', 'VMungo1080G0485' => 'vmu', 'VMungo1215G3177' => 'vmu', 'Zm00001eb112600' => 'zma', 'Zm00001eb120220' => 'zma', 'Zm00001eb153240' => 'zma', 'Zm00001eb168880' => 'zma', 'Zm00001eb213920' => 'zma', 'Zm00001eb228280' => 'zma', 'Zm00001eb254580' => 'zma', 'Zm00001eb272180' => 'zma', 'Zm00001eb293190' => 'zma', 'Zm00001eb322930' => 'zma', 'Zm00001eb353360' => 'zma', 'Zm00001eb353390' => 'zma', 'Zm00001eb353430' => 'zma', 'Zm00001eb353440' => 'zma', 'Zm00001eb353780' => 'zma' ), 'gf_id' => 'HOM05D000499', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000499' ), 'data_identifier' => 'HOM05D000499', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000499', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1066', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p29780' => 'bna', 'A02p33180' => 'bna', 'A03p16470' => 'bna', 'A03p66010' => 'bna', 'A04p25970' => 'bna', 'A06p01270' => 'bna', 'A06p46080' => 'bna', 'A07p11400' => 'bna', 'A08p01840' => 'bna', 'A08p08230' => 'bna', 'A08p25740' => 'bna', 'A09p32070' => 'bna', 'A09p37830' => 'bna', 'A09p42840' => 'bna', 'A09p42850' => 'bna', 'Aa31LG10G2060' => 'aar', 'Aa31LG2G7410' => 'aar', 'Aa31LG6G10200' => 'aar', 'Aa31LG6G16680' => 'aar', 'Aa31LG6G8470' => 'aar', 'Aa31LG9G12730' => 'aar', 'Aa31LG9G13680' => 'aar', 'Aa31LG9G14920' => 'aar', 'Aa31LG9G6650' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4977' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5467' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3254' => 'aag', 'Actinidia02578' => 'ach', 'Actinidia07693' => 'ach', 'Actinidia08413' => 'ach', 'Actinidia08414' => 'ach', 'Actinidia15289' => 'ach', 'Actinidia19871' => 'ach', 'Actinidia21475' => 'ach', 'Actinidia22576' => 'ach', 'Actinidia28327' => 'ach', 'Actinidia32491' => 'ach', 'Actinidia39463' => 'ach', 'Actinidia39571' => 'ach', 'Ah.01g013750' => 'amhyb', 'Ah.01g023210' => 'amhyb', 'Ah.04g164850' => 'amhyb', 'Ah.05g178060' => 'amhyb', 'Ah.07g204270' => 'amhyb', 'Ah.07g208480' => 'amhyb', 'Ah.09g237410' => 'amhyb', 'Ah.14g089460' => 'amhyb', 'AL1G41790' => 'aly', 'AL1G49050' => 'aly', 'AL1G53810' => 'aly', 'AL1G61400' => 'aly', 'AL4G18580' => 'aly', 'AL5G12510' => 'aly', 'AL5G12540' => 'aly', 'AL6G43230' => 'aly', 'AL7G10370' => 'aly', 'AL7G19250' => 'aly', 'AL8G12240' => 'aly', 'AL8G18540' => 'aly', 'Aqoxy1G02409' => 'aox', 'Aqoxy2G03993' => 'aox', 'Aqoxy3G03357' => 'aox', 'Aqoxy4G00785' => 'aox', 'Aqoxy5G02598' => 'aox', 'Aqoxy6G00132' => 'aox', 'Aqoxy7G01776' => 'aox', 'Aqoxy7G02316' => 'aox', 'Aqoxy7G03973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.12AFKW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B8730' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27IQR1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3F75VG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3RE0GA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41TCQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.527VTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FIR39' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5W8UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DA38EV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ63HS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H1I32C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HC27T5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4M8AP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7N3CZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9UVDZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LS1NQA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT1D4B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SKC4TM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCFV76' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF9Q1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQWD9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1ZM88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WE07RT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YCK7VH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJE6Q6' => 'arhy', 'AT1G28240' => 'ath', 'AT1G34550' => 'ath', 'AT1G53040' => 'ath', 'AT2G02910' => 'ath', 'AT4G09630' => 'ath', 'AT4G38500' => 'ath', 'AT5G42660' => 'ath', 'AT5G46220' => 'ath', 'ATR0152G026' => 'atr', 'ATR0564G343' => 'atr', 'ATR0706G151' => 'atr', 'ATR0733G207' => 'atr', 'ATR0751G234' => 'atr', 'ATR0807G048' => 'atr', 'ATR1091G084' => 'atr', 'Atru.chr10.1229' => 'acertr', 'Atru.chr10.1230' => 'acertr', 'Atru.chr10.1874' => 'acertr', 'Atru.chr11.1808' => 'acertr', 'Atru.chr13.1795' => 'acertr', 'Atru.chr13.570' => 'acertr', 'Atru.chr2.2608' => 'acertr', 'Atru.chr2.2609' => 'acertr', 'Atru.chr5.3428' => 'acertr', 'Atru.chr8.1171' => 'acertr', 'AUR62004651' => 'cqu', 'AUR62008675' => 'cqu', 'AUR62010014' => 'cqu', 'AUR62013004' => 'cqu', 'AUR62014825' => 'cqu', 'AUR62015015' => 'cqu', 'AUR62015151' => 'cqu', 'AUR62017020' => 'cqu', 'AUR62019422' => 'cqu', 'AUR62023570' => 'cqu', 'AUR62025571' => 'cqu', 'AUR62029098' => 'cqu', 'AUR62033863' => 'cqu', 'AUR62034296' => 'cqu', 'AUR62040075' => 'cqu', 'BcaB02g07334' => 'bca', 'BcaB02g10575' => 'bca', 'BcaB03g12119' => 'bca', 'BcaB03g12120' => 'bca', 'BcaB03g13945' => 'bca', 'BcaB04g17123' => 'bca', 'BcaB04g17867' => 'bca', 'BcaB04g19839' => 'bca', 'BcaB07g30317' => 'bca', 'BcaB07g32432' => 'bca', 'BcaB07g33362' => 'bca', 'BcaB08g36611' => 'bca', 'BcaC01g00028' => 'bca', 'BcaC01g01356' => 'bca', 'BcaC01g02034' => 'bca', 'BcaC01g06051' => 'bca', 'BcaC03g16839' => 'bca', 'BcaC03g17176' => 'bca', 'BcaC05g26829' => 'bca', 'BcaC06g31490' => 'bca', 'BcaC06g35344' => 'bca', 'BcaC06g36570' => 'bca', 'BcaC07g37537' => 'bca', 'BcaC08g43491' => 'bca', 'BcaC08g43773' => 'bca', 'BcaNung00234' => 'bca', 'BcaNung01982' => 'bca', 'BcaNung03707' => 'bca', 'BcaNung06454' => 'bca', 'BolC2t10762H' => 'bol', 'BolC2t11191H' => 'bol', 'BolC3t14322H' => 'bol', 'BolC3t19747H' => 'bol', 'BolC3t21425H' => 'bol', 'BolC4t27800H' => 'bol', 'BolC5t31423H' => 'bol', 'BolC6t35951H' => 'bol', 'BolC6t36282H' => 'bol', 'BolC7t40678H' => 'bol', 'BolC7t40679H' => 'bol', 'BolC7t42222H' => 'bol', 'BolC7t43492H' => 'bol', 'BolC7t46785H' => 'bol', 'BolC8t47853H' => 'bol', 'BolC9t56805H' => 'bol', 'BraA02t08000Z' => 'bra', 'BraA02t08341Z' => 'bra', 'BraA03t10936Z' => 'bra', 'BraA03t15657Z' => 'bra', 'BraA04t18100Z' => 'bra', 'BraA05t20523Z' => 'bra', 'BraA06t23353Z' => 'bra', 'BraA06t27473Z' => 'bra', 'BraA06t27769Z' => 'bra', 'BraA07t28928Z' => 'bra', 'BraA08t32236Z' => 'bra', 'BraA08t32841Z' => 'bra', 'BraA08t34524Z' => 'bra', 'BraA09t38742Z' => 'bra', 'BraA09t39295Z' => 'bra', 'C02p47180' => 'bna', 'C02p50990' => 'bna', 'C03p19360' => 'bna', 'C03p74950' => 'bna', 'C03p91000' => 'bna', 'C04p63260' => 'bna', 'C05p27050' => 'bna', 'C06p08750' => 'bna', 'C06p11490' => 'bna', 'C07p02820' => 'bna', 'C07p17180' => 'bna', 'C07p29440' => 'bna', 'C07p63730' => 'bna', 'C09p39260' => 'bna', 'CAN.G1164.34' => 'can', 'CAN.G1164.39' => 'can', 'CAN.G1530.3' => 'can', 'CAN.G162.61' => 'can', 'CAN.G176.6' => 'can', 'CAN.G289.49' => 'can', 'CAN.G370.21' => 'can', 'CAN.G370.22' => 'can', 'CAN.G371.117' => 'can', 'CAN.G58.37' => 'can', 'CAN.G588.98' => 'can', 'CANSAT21G2266' => 'cansat', 'CANSAT25G2799' => 'cansat', 'CANSAT35G0862' => 'cansat', 'CANSAT35G1704' => 'cansat', 'CANSAT35G1760' => 'cansat', 'CANSAT56G3971' => 'cansat', 'CANSAT56G4116' => 'cansat', 'CANSAT80G1259' => 'cansat', 'CARHR027730' => 'chi', 'CARHR033880' => 'chi', 'CARHR043270' => 'chi', 'CARHR145330' => 'chi', 'CARHR145340' => 'chi', 'CARHR175570' => 'chi', 'CARHR181570' => 'chi', 'CARHR258470' => 'chi', 'CARHR260490' => 'chi', 'CARHR294220' => 'chi', 'Carub.0001s2668' => 'cru', 'Carub.0001s3257' => 'cru', 'Carub.0001s4220' => 'cru', 'Carub.0005s0179' => 'cru', 'Carub.0006s2807' => 'cru', 'Carub.0007s0039' => 'cru', 'Carub.0008s0169' => 'cru', 'Carub.0008s0636' => 'cru', 'Ca_00338_v3' => 'car', 'Ca_00542_v3' => 'car', 'Ca_01844_v3' => 'car', 'Ca_10611_v3' => 'car', 'Ca_13326_v3' => 'car', 'Ca_17944_v3' => 'car', 'Ca_18546_v3' => 'car', 'Ca_24219_v3' => 'car', 'Ca_29972_v3' => 'car', 'CBR_g3681' => 'cbr', 'CBR_g40021' => 'cbr', 'Cc01_g08140' => 'ccan', 'Cc02_g13410' => 'ccan', 'Cc02_g37480' => 'ccan', 'Cc05_g12030' => 'ccan', 'Cc09_g03370' => 'ccan', 'Cc09_g10300' => 'ccan', 'Cc10_g03530' => 'ccan', 'Cc10_g11380' => 'ccan', 'CDE01G0176' => 'cde', 'CDE02G0675' => 'cde', 'CDE02G0942' => 'cde', 'CDE02G1153' => 'cde', 'CDE02G4177' => 'cde', 'CDE04G2117' => 'cde', 'CDE04G2736' => 'cde', 'CDE08G1161' => 'cde', 'CDE09G1238' => 'cde', 'Cfa000467' => 'cfa', 'Cfa000947' => 'cfa', 'Cfa004969' => 'cfa', 'Cfa005284' => 'cfa', 'Cfa008993' => 'cfa', 'Cfa018187' => 'cfa', 'Cfa018454' => 'cfa', 'Cfa020585' => 'cfa', 'Ciclev10000424m.g' => 'ccl', 'Ciclev10003605m.g' => 'ccl', 'Ciclev10007828m.g' => 'ccl', 'Ciclev10014620m.g' => 'ccl', 'Ciclev10015169m.g' => 'ccl', 'Ciclev10018291m.g' => 'ccl', 'Ciclev10028256m.g' => 'ccl', 'Ciclev10033822m.g' => 'ccl', 'CiPaw.05G060300' => 'cil', 'CiPaw.05G085000' => 'cil', 'CiPaw.06G083700' => 'cil', 'CiPaw.06G120300' => 'cil', 'CiPaw.09G060500' => 'cil', 'CiPaw.09G123800' => 'cil', 'CiPaw.11G169700' => 'cil', 'CiPaw.12G118300' => 'cil', 'CiPaw.15G071000' => 'cil', 'CiPaw.15G081900' => 'cil', 'ClCG01G024610' => 'cla', 'ClCG03G006070' => 'cla', 'ClCG05G019250' => 'cla', 'ClCG09G009500' => 'cla', 'ClCG11G008200' => 'cla', 'ClCG11G018080' => 'cla', 'COL.COLO4_17373' => 'col', 'COL.COLO4_22994' => 'col', 'COL.COLO4_26389' => 'col', 'COL.COLO4_27170' => 'col', 'COL.COLO4_31074' => 'col', 'COL.COLO4_31465' => 'col', 'COL.COLO4_36438' => 'col', 'COL.COLO4_36439' => 'col', 'Cpa.g.c38781' => 'cpa', 'Cpa.g.sc128.12' => 'cpa', 'Cpa.g.sc166.7' => 'cpa', 'Cpa.g.sc166.8' => 'cpa', 'Cpa.g.sc20.111' => 'cpa', 'Cpa.g.sc27.31' => 'cpa', 'Cpa.g.sc64.36' => 'cpa', 'Cpa.g.sc64.37' => 'cpa', 'Cpa.g.sc66.49' => 'cpa', 'Cpa.g.sc80.64' => 'cpa', 'CsaV3_1G012320' => 'csa', 'CsaV3_2G008480' => 'csa', 'CsaV3_2G033450' => 'csa', 'CsaV3_3G044830' => 'csa', 'CsaV3_4G033710' => 'csa', 'CsaV3_6G051730' => 'csa', 'CsaV3_7G025350' => 'csa', 'CSS0001067' => 'camsi', 'CSS0005996' => 'camsi', 'CSS0006590' => 'camsi', 'CSS0009673' => 'camsi', 'CSS0010201' => 'camsi', 'CSS0010549' => 'camsi', 'CSS0011364' => 'camsi', 'CSS0014473' => 'camsi', 'CSS0014961' => 'camsi', 'CSS0020191' => 'camsi', 'CSS0021165' => 'camsi', 'CSS0022306' => 'camsi', 'CSS0030591' => 'camsi', 'CSS0030696' => 'camsi', 'CSS0032653' => 'camsi', 'CSS0037487' => 'camsi', 'CSS0041102' => 'camsi', 'CSS0041261' => 'camsi', 'CSS0046246' => 'camsi', 'CSS0049256' => 'camsi', 'DCAR_004075' => 'dca', 'DCAR_011538' => 'dca', 'DCAR_019553' => 'dca', 'DCAR_020952' => 'dca', 'DCAR_021739' => 'dca', 'DCAR_027407' => 'dca', 'DCAR_027913' => 'dca', 'DCAR_028066' => 'dca', 'Dinv05899' => 'din', 'Dinv07563' => 'din', 'Dinv08010' => 'din', 'Dinv14125' => 'din', 'Dinv20172' => 'din', 'Dinv30743' => 'din', 'Dinv31229' => 'din', 'Dinv34162' => 'din', 'Dinv36028' => 'din', 'Dinv39368' => 'din', 'Dinv40565' => 'din', 'Dinv41706' => 'din', 'Duzib052G0089' => 'dzi', 'Duzib116G0641' => 'dzi', 'Duzib132G0069' => 'dzi', 'Duzib132G1219' => 'dzi', 'Duzib147G0278' => 'dzi', 'Duzib160G0480' => 'dzi', 'Duzib170G0661' => 'dzi', 'Duzib177G0591' => 'dzi', 'Duzib187G1353' => 'dzi', 'Duzib192G0858' => 'dzi', 'Duzib192G0883' => 'dzi', 'Duzib213G0506' => 'dzi', 'Duzib235G0289' => 'dzi', 'Duzib251G0422' => 'dzi', 'ECA232G3898' => 'eca', 'ECA233G5950' => 'eca', 'ECA234G1699' => 'eca', 'ECA234G2421' => 'eca', 'ECA236G0426' => 'eca', 'ECA236G4331' => 'eca', 'ECA248G2573' => 'eca', 'EL10Ac1g00077' => 'bvu', 'EL10Ac1g01746' => 'bvu', 'EL10Ac2g03464' => 'bvu', 'EL10Ac4g08176' => 'bvu', 'EL10Ac7g17521' => 'bvu', 'EL10Ac8g20386' => 'bvu', 'EL10Ac9g21343' => 'bvu', 'EL10Ac9g22688' => 'bvu', 'Eucgr.B03434' => 'egr', 'Eucgr.D00618' => 'egr', 'Eucgr.E02395' => 'egr', 'Eucgr.F01129' => 'egr', 'Eucgr.F02622' => 'egr', 'Eucgr.F04207' => 'egr', 'FAN01G0570' => 'fan', 'FAN03G3351' => 'fan', 'FAN06G3702' => 'fan', 'FAN07G2149' => 'fan', 'FAN10G3758' => 'fan', 'FAN11G1170' => 'fan', 'FAN11G2050' => 'fan', 'FAN11G2724' => 'fan', 'FAN12G1700' => 'fan', 'FAN12G2028' => 'fan', 'FAN15G1160' => 'fan', 'FAN15G3063' => 'fan', 'FAN16G2540' => 'fan', 'FAN16G3077' => 'fan', 'FAN16G3624' => 'fan', 'FAN17G0221' => 'fan', 'FAN20G2492' => 'fan', 'FAN20G2905' => 'fan', 'FAN21G0548' => 'fan', 'FAN21G1300' => 'fan', 'FAN22G0077' => 'fan', 'FAN22G1315' => 'fan', 'FAN24G1280' => 'fan', 'FAN24G1445' => 'fan', 'FAN24G3527' => 'fan', 'FAN25G0464' => 'fan', 'FAN25G2885' => 'fan', 'FAN25G3270' => 'fan', 'FAN27G1101' => 'fan', 'FAN27G2846' => 'fan', 'FAN27G3524' => 'fan', 'FvH4_2g11770' => 'fve', 'FvH4_2g15630' => 'fve', 'FvH4_3g05570' => 'fve', 'FvH4_3g09110' => 'fve', 'FvH4_3g19940' => 'fve', 'FvH4_4g04821' => 'fve', 'FvH4_4g31480' => 'fve', 'FvH4_7g01740' => 'fve', 'Glyma.05G130400' => 'gma', 'Glyma.05G156400' => 'gma', 'Glyma.07G197000' => 'gma', 'Glyma.08G085151' => 'gma', 'Glyma.08G114500' => 'gma', 'Glyma.08G300400' => 'gma', 'Glyma.10G215800' => 'gma', 'Glyma.12G224400' => 'gma', 'Glyma.13G179300' => 'gma', 'Glyma.13G218151' => 'gma', 'Glyma.13G238800' => 'gma', 'Glyma.13G276900' => 'gma', 'Glyma.14G078200' => 'gma', 'Glyma.15G074500' => 'gma', 'Glyma.15G094100' => 'gma', 'Glyma.17G247200' => 'gma', 'Glyma.18G120100' => 'gma', 'Glyma.20G176000' => 'gma', 'Gohir.A01G063600' => 'ghi', 'Gohir.A01G170301' => 'ghi', 'Gohir.A02G060500' => 'ghi', 'Gohir.A05G133850' => 'ghi', 'Gohir.A05G161400' => 'ghi', 'Gohir.A06G012900' => 'ghi', 'Gohir.A06G035901' => 'ghi', 'Gohir.A06G127100' => 'ghi', 'Gohir.A06G210500' => 'ghi', 'Gohir.A08G008650' => 'ghi', 'Gohir.A09G072700' => 'ghi', 'Gohir.A09G088301' => 'ghi', 'Gohir.A10G040600' => 'ghi', 'Gohir.A12G036300' => 'ghi', 'Gohir.A12G143350' => 'ghi', 'Gohir.A12G165500' => 'ghi', 'Gohir.A13G145700' => 'ghi', 'Gohir.D01G050000' => 'ghi', 'Gohir.D01G051366' => 'ghi', 'Gohir.D01G161350' => 'ghi', 'Gohir.D02G065900' => 'ghi', 'Gohir.D05G164200' => 'ghi', 'Gohir.D05G355500' => 'ghi', 'Gohir.D06G010400' => 'ghi', 'Gohir.D06G111250' => 'ghi', 'Gohir.D06G132000' => 'ghi', 'Gohir.D06G210500' => 'ghi', 'Gohir.D07G165675' => 'ghi', 'Gohir.D08G062240' => 'ghi', 'Gohir.D08G086101' => 'ghi', 'Gohir.D08G138060' => 'ghi', 'Gohir.D09G072300' => 'ghi', 'Gohir.D10G041400' => 'ghi', 'Gohir.D11G191020' => 'ghi', 'Gohir.D11G212066' => 'ghi', 'Gohir.D12G036300' => 'ghi', 'Gohir.D12G168600' => 'ghi', 'Gohir.D13G150600' => 'ghi', 'Gorai.001G057300' => 'gra', 'Gorai.002G069900' => 'gra', 'Gorai.002G200000' => 'gra', 'Gorai.003G067600' => 'gra', 'Gorai.005G074800' => 'gra', 'Gorai.006G087300' => 'gra', 'Gorai.008G037500' => 'gra', 'Gorai.008G181400' => 'gra', 'Gorai.009G169400' => 'gra', 'Gorai.009G387900' => 'gra', 'Gorai.010G013300' => 'gra', 'Gorai.010G153800' => 'gra', 'Gorai.010G255800' => 'gra', 'Gorai.011G043700' => 'gra', 'Gorai.011G198900' => 'gra', 'Gorai.013G168400' => 'gra', 'GSVIVG01005212001' => 'vvi', 'GSVIVG01006163001' => 'vvi', 'GSVIVG01009625001' => 'vvi', 'GSVIVG01014338001' => 'vvi', 'GSVIVG01020005001' => 'vvi', 'GSVIVG01021450001' => 'vvi', 'GSVIVG01023975001' => 'vvi', 'GSVIVG01034490001' => 'vvi', 'HanXRQChr04g0112071' => 'han', 'HanXRQChr05g0131151' => 'han', 'HanXRQChr09g0262371' => 'han', 'HanXRQChr09g0268401' => 'han', 'HanXRQChr10g0279241' => 'han', 'HanXRQChr10g0297961' => 'han', 'HanXRQChr11g0326231' => 'han', 'HanXRQChr11g0328471' => 'han', 'HanXRQChr16g0507941' => 'han', 'HanXRQChr17g0560211' => 'han', 'Haze_02108' => 'cav', 'Haze_02428' => 'cav', 'Haze_05593' => 'cav', 'Haze_06448' => 'cav', 'Haze_09427' => 'cav', 'Haze_12022' => 'cav', 'Haze_17612' => 'cav', 'Haze_17928' => 'cav', 'Hma1.2p1_0032F.1_g019250' => 'hma', 'Hma1.2p1_0163F.1_g072690' => 'hma', 'Hma1.2p1_0265F.1_g106710' => 'hma', 'Hma1.2p1_0286F.1_g113970' => 'hma', 'Hma1.2p1_0363F.1_g136640' => 'hma', 'Hma1.2p1_0584F.1_g183470' => 'hma', 'Hma1.2p1_0885F.1_g232570' => 'hma', 'HPP92_006022' => 'vpl', 'HPP92_007320' => 'vpl', 'HPP92_011521' => 'vpl', 'HPP92_019387' => 'vpl', 'HPP92_024038' => 'vpl', 'Hund05891' => 'sun', 'Hund06450' => 'sun', 'Hund12053' => 'sun', 'Hund16800' => 'sun', 'Hund21222' => 'sun', 'Hund22896' => 'sun', 'Hund23746' => 'sun', 'Hund27083' => 'sun', 'Lalb_Chr02g0141831' => 'lal', 'Lalb_Chr02g0141841' => 'lal', 'Lalb_Chr05g0220411' => 'lal', 'Lalb_Chr06g0162081' => 'lal', 'Lalb_Chr09g0327651' => 'lal', 'Lalb_Chr13g0295051' => 'lal', 'Lalb_Chr15g0086801' => 'lal', 'Lalb_Chr16g0383781' => 'lal', 'Lalb_Chr16g0383791' => 'lal', 'Lalb_Chr18g0055441' => 'lal', 'Lalb_Chr18g0059611' => 'lal', 'Lalb_Chr20g0109661' => 'lal', 'Lalb_Chr20g0109831' => 'lal', 'Lalb_Chr20g0121871' => 'lal', 'Lalb_Chr22g0355361' => 'lal', 'Lalb_Chr25g0286371' => 'lal', 'Lj1A1187G43' => 'lonja', 'Lj1A1205T50' => 'lonja', 'Lj1A800G33' => 'lonja', 'Lj1C1187T7' => 'lonja', 'Lj1C843T11' => 'lonja', 'Lj1g0010940' => 'lja', 'Lj2A288T69' => 'lonja', 'Lj3g0024276' => 'lja', 'Lj4A47T76' => 'lonja', 'Lj4g0005805' => 'lja', 'Lj4g0006097' => 'lja', 'Lj4g0008528' => 'lja', 'Lj4g0024907' => 'lja', 'Lj5g0012472' => 'lja', 'Lj5g0018648' => 'lja', 'Lj6C789G1' => 'lonja', 'Lj6g0004000' => 'lja', 'Lj7A292G67' => 'lonja', 'Lj7A292T64' => 'lonja', 'Lj9A400T58' => 'lonja', 'Lsat_1_v5_gn_1_126181' => 'lsa', 'Lsat_1_v5_gn_4_123041' => 'lsa', 'Lsat_1_v5_gn_4_133620' => 'lsa', 'Lsat_1_v5_gn_4_53221' => 'lsa', 'Lsat_1_v5_gn_4_71961' => 'lsa', 'Lsat_1_v5_gn_7_105241' => 'lsa', 'Lsat_1_v5_gn_7_21361' => 'lsa', 'Lsat_1_v5_gn_7_28860' => 'lsa', 'Lsat_1_v5_gn_7_31260' => 'lsa', 'Lsat_1_v5_gn_8_52801' => 'lsa', 'Manes.02G191400' => 'mes', 'Manes.03G110100' => 'mes', 'Manes.04G071100' => 'mes', 'Manes.05G100500' => 'mes', 'Manes.05G164700' => 'mes', 'Manes.15G087000' => 'mes', 'Manes.15G121500' => 'mes', 'Manes.16G028300' => 'mes', 'Manes.17G046100' => 'mes', 'Manes.17G069800' => 'mes', 'Manes.18G100500' => 'mes', 'Mapoly0002s0109' => 'mpo', 'Mapoly0024s0007' => 'mpo', 'Mapoly0089s0032' => 'mpo', 'MBI04_g42241_MAGBIO' => 'mbi', 'MBI05_g11988_MAGBIO' => 'mbi', 'MBI05_g35452_MAGBIO' => 'mbi', 'MBI07_g30179_MAGBIO' => 'mbi', 'MBI07_g35859_MAGBIO' => 'mbi', 'MBI07_g35860_MAGBIO' => 'mbi', 'MBI07_g37166_MAGBIO' => 'mbi', 'MBI08_g18172_MAGBIO' => 'mbi', 'MBI09_g08441_MAGBIO' => 'mbi', 'MBI13_g01676_MAGBIO' => 'mbi', 'MBI14_g42955_MAGBIO' => 'mbi', 'MBI16_g13161_MAGBIO' => 'mbi', 'MBI17_g27204_MAGBIO' => 'mbi', 'MBI19_g21595_MAGBIO' => 'mbi', 'MD00G1148400' => 'mdo', 'MD02G1301200' => 'mdo', 'MD03G1227800' => 'mdo', 'MD05G1041100' => 'mdo', 'MD05G1124800' => 'mdo', 'MD05G1284000' => 'mdo', 'MD05G1338800' => 'mdo', 'MD05G1338900' => 'mdo', 'MD07G1022800' => 'mdo', 'MD10G1047500' => 'mdo', 'MD10G1127500' => 'mdo', 'MD10G1262300' => 'mdo', 'MD10G1293800' => 'mdo', 'MD16G1074300' => 'mdo', 'Medtr1g021670' => 'mtr', 'Medtr1g096320' => 'mtr', 'Medtr2g013690' => 'mtr', 'Medtr2g019450' => 'mtr', 'Medtr2g085170' => 'mtr', 'Medtr4g088785' => 'mtr', 'Medtr8g055930' => 'mtr', 'Medtr8g085850' => 'mtr', 'MELO3C002605.2' => 'cme', 'MELO3C003891.2' => 'cme', 'MELO3C004012.2' => 'cme', 'MELO3C007134.2' => 'cme', 'MELO3C008118.2' => 'cme', 'MELO3C016700.2' => 'cme', 'MELO3C024127.2' => 'cme', 'MELO3C033361.2' => 'cme', 'MELO3C033362.2' => 'cme', 'Migut.C00430' => 'egut', 'Migut.C01246' => 'egut', 'Migut.E00101' => 'egut', 'Migut.H01486' => 'egut', 'Migut.H01939' => 'egut', 'Migut.K00360' => 'egut', 'Migut.M00910' => 'egut', 'Migut.M01139' => 'egut', 'Migut.N02677' => 'egut', 'MSTRG.13252' => 'ama', 'MSTRG.14701' => 'ama', 'MSTRG.1521' => 'ama', 'MSTRG.15884' => 'ama', 'MSTRG.16242' => 'ama', 'MSTRG.22285' => 'ama', 'MSTRG.22444' => 'ama', 'MSTRG.2349' => 'ama', 'MSTRG.26308' => 'ama', 'MSTRG.28296' => 'ama', 'MSTRG.9895' => 'ama', 'Nitab4.5_0000110g0060' => 'nta', 'Nitab4.5_0000420g0130' => 'nta', 'Nitab4.5_0000422g0030' => 'nta', 'Nitab4.5_0000560g0180' => 'nta', 'Nitab4.5_0000703g0100' => 'nta', 'Nitab4.5_0000786g0200' => 'nta', 'Nitab4.5_0001336g0020' => 'nta', 'Nitab4.5_0001796g0030' => 'nta', 'Nitab4.5_0003348g0060' => 'nta', 'Nitab4.5_0003698g0040' => 'nta', 'Nitab4.5_0003942g0090' => 'nta', 'Nitab4.5_0004775g0070' => 'nta', 'Nitab4.5_0004864g0030' => 'nta', 'Nitab4.5_0005615g0020' => 'nta', 'Nitab4.5_0009288g0030' => 'nta', 'Nitab4.5_0009341g0010' => 'nta', 'Nitab4.5_0009535g0010' => 'nta', 'Nn1g03995' => 'nnu', 'Nn1g04100' => 'nnu', 'Nn1g06530' => 'nnu', 'Nn3g16404' => 'nnu', 'Nn3g17212' => 'nnu', 'Nn3g20776' => 'nnu', 'Nn3g21923' => 'nnu', 'Nn5g27737' => 'nnu', 'Nn5g29461' => 'nnu', 'Nn7g38355' => 'nnu', 'Nn8g39873' => 'nnu', 'Oeu000548.2' => 'oeu', 'Oeu004672.1' => 'oeu', 'Oeu015605.2' => 'oeu', 'Oeu016092.1' => 'oeu', 'Oeu017879.3' => 'oeu', 'Oeu024910.1' => 'oeu', 'Oeu028965.1' => 'oeu', 'Oeu031269.1' => 'oeu', 'Oeu031270.1' => 'oeu', 'Oeu032535.1' => 'oeu', 'Oeu034151.1' => 'oeu', 'Oeu034152.1' => 'oeu', 'Oeu034588.2' => 'oeu', 'Oeu050846.1' => 'oeu', 'Oeu050849.2' => 'oeu', 'Oeu051063.2' => 'oeu', 'Oeu052368.1' => 'oeu', 'Oeu052370.1' => 'oeu', 'Os01g0210400' => 'osa', 'Os01g0304300' => 'osa', 'Os01g0749100' => 'osa', 'Os02g0745800' => 'osa', 'Os03g0769050' => 'osa', 'Os05g0531500' => 'osa', 'Os06g0724300' => 'osa', 'Os11g0198100' => 'osa', 'Peaxi162Scf00069g01425' => 'pax', 'Peaxi162Scf00280g00811' => 'pax', 'Peaxi162Scf00310g00615' => 'pax', 'Peaxi162Scf00362g00542' => 'pax', 'Peaxi162Scf00461g00310' => 'pax', 'Peaxi162Scf00530g00118' => 'pax', 'Peaxi162Scf00541g00057' => 'pax', 'Peaxi162Scf00661g00017' => 'pax', 'Peaxi162Scf00926g00027' => 'pax', 'Peaxi162Scf01064g00263' => 'pax', 'Peaxi162Scf01211g00135' => 'pax', 'PGR004G2336' => 'pgr', 'PGR042G0327' => 'pgr', 'PGR042G1957' => 'pgr', 'PGR042G2003' => 'pgr', 'PGR042G3929' => 'pgr', 'PGR083G1137' => 'pgr', 'PGR083G1364' => 'pgr', 'PGSC0003DMG400003381' => 'stu', 'PGSC0003DMG400003417' => 'stu', 'PGSC0003DMG400008981' => 'stu', 'PGSC0003DMG400012417' => 'stu', 'PGSC0003DMG400012823' => 'stu', 'PGSC0003DMG400016885' => 'stu', 'PGSC0003DMG400022812' => 'stu', 'PGSC0003DMG400029726' => 'stu', 'PGSC0003DMG401009243' => 'stu', 'PGSC0003DMG401031505' => 'stu', 'PGSC0003DMG402031505' => 'stu', 'Phvul.001G017600' => 'pvu', 'Phvul.002G193500' => 'pvu', 'Phvul.002G228900' => 'pvu', 'Phvul.002G236800' => 'pvu', 'Phvul.003G049500' => 'pvu', 'Phvul.005G072000' => 'pvu', 'Phvul.006G164800' => 'pvu', 'Phvul.006G185100' => 'pvu', 'Phvul.007G090000' => 'pvu', 'Potri.001G399800' => 'ptr', 'Potri.002G149900' => 'ptr', 'Potri.004G044100' => 'ptr', 'Potri.004G177600' => 'ptr', 'Potri.009G138000' => 'ptr', 'Potri.010G094000' => 'ptr', 'Potri.011G053000' => 'ptr', 'Potri.011G119300' => 'ptr', 'Potri.013G113700' => 'ptr', 'Potri.018G107800' => 'ptr', 'Potri.019G084100' => 'ptr', 'Pp3c14_23720' => 'ppa', 'Pp3c16_6340' => 'ppa', 'Pp3c23_13420' => 'ppa', 'Pp3c24_2740' => 'ppa', 'Pp3c25_860' => 'ppa', 'Pp3c8_21750' => 'ppa', 'Prupe.1G273000' => 'ppe', 'Prupe.1G273700' => 'ppe', 'Prupe.1G274100' => 'ppe', 'Prupe.2G023300' => 'ppe', 'Prupe.4G048000' => 'ppe', 'Prupe.4G080400' => 'ppe', 'Prupe.4G181200' => 'ppe', 'Prupe.8G056900' => 'ppe', 'Prupe.8G168700' => 'ppe', 'Psat1g189080' => 'psa', 'Psat1g204760' => 'psa', 'Psat4g175560' => 'psa', 'Psat4g177720' => 'psa', 'Psat5g244240' => 'psa', 'Psat6g010720' => 'psa', 'Psat6g187200' => 'psa', 'Psat7g072040' => 'psa', 'PSO017G3501' => 'pso', 'PSO063G2148' => 'pso', 'PSO063G5608' => 'pso', 'PSO210G6392' => 'pso', 'PSO541G2319' => 'pso', 'PSO541G2836' => 'pso', 'PSO541G4012' => 'pso', 'PSO541G6253' => 'pso', 'PSO675G0580' => 'pso', 'PSO675G0856' => 'pso', 'PSO675G5635' => 'pso', 'PSO675G9157' => 'pso', 'PSO832G1660' => 'pso', 'PSO832G1969' => 'pso', 'QL02p007186' => 'qlo', 'QL02p033904' => 'qlo', 'QL03p064391' => 'qlo', 'QL05p040593' => 'qlo', 'QL05p058242' => 'qlo', 'QL08p021825' => 'qlo', 'QL11p004981' => 'qlo', 'RcHm_v2.0_Chr1g0318301' => 'rch', 'RcHm_v2.0_Chr4g0418501' => 'rch', 'RcHm_v2.0_Chr4g0439971' => 'rch', 'RcHm_v2.0_Chr5g0008541' => 'rch', 'RcHm_v2.0_Chr5g0014101' => 'rch', 'RcHm_v2.0_Chr5g0014131' => 'rch', 'RcHm_v2.0_Chr5g0033621' => 'rch', 'RcHm_v2.0_Chr6g0272041' => 'rch', 'RcHm_v2.0_Chr6g0278831' => 'rch', 'Rhsim02G0130400' => 'rsi', 'Rhsim02G0171100' => 'rsi', 'Rhsim05G0053000' => 'rsi', 'Rhsim05G0053100' => 'rsi', 'Rhsim06G0096500' => 'rsi', 'Rhsim06G0096600' => 'rsi', 'Rhsim06G0199100' => 'rsi', 'Rhsim12G0062300' => 'rsi', 'Rhsim12G0062800' => 'rsi', 'Sabra02G0118600' => 'sbr', 'Sabra04G0027300' => 'sbr', 'Sabra04G0119500' => 'sbr', 'Sabra08G0112500' => 'sbr', 'Sabra11G0036800' => 'sbr', 'Sabra11G0103800' => 'sbr', 'Sabra13G0096300' => 'sbr', 'Sabra16G0262300' => 'sbr', 'Sabra18G0091700' => 'sbr', 'Sabra19G0095400' => 'sbr', 'SalBow6G3080' => 'sbo', 'SalBow7G1157' => 'sbo', 'SalBow7G2123' => 'sbo', 'SalBow7G2285' => 'sbo', 'SalBow7G3537' => 'sbo', 'SalBow8G2947' => 'sbo', 'SalBow8G4463' => 'sbo', 'SalBow8G5466' => 'sbo', 'Sc01g0001750' => 'sci', 'Sc02g0006640' => 'sci', 'Sc02g0006670' => 'sci', 'Sc04g0008220' => 'sci', 'Sc05g0006190' => 'sci', 'Sc08g0002760' => 'sci', 'Sc17g0006170' => 'sci', 'Sc22g0002050' => 'sci', 'Sc23g0001190' => 'sci', 'Sc24g0000980' => 'sci', 'Sed0006245' => 'sed', 'Sed0007543' => 'sed', 'Sed0009411' => 'sed', 'Sed0010765' => 'sed', 'Sed0012944' => 'sed', 'Sed0014682' => 'sed', 'Sed0016174' => 'sed', 'Sed0016796' => 'sed', 'Sed0020317' => 'sed', 'Sed0021467' => 'sed', 'SEGI_01316' => 'sgi', 'SEGI_03374' => 'sgi', 'SEGI_16265' => 'sgi', 'SEGI_18569' => 'sgi', 'SEGI_20351' => 'sgi', 'SEGI_26395' => 'sgi', 'SEGI_29469' => 'sgi', 'SEGI_34771' => 'sgi', 'SEGI_36769' => 'sgi', 'SEGI_37139' => 'sgi', 'SGA_v2.0_scaffold100G29687' => 'sas', 'SGA_v2.0_scaffold118G32472' => 'sas', 'SGA_v2.0_scaffold14G07051' => 'sas', 'SGA_v2.0_scaffold183G39845' => 'sas', 'SGA_v2.0_scaffold1G00174' => 'sas', 'SGA_v2.0_scaffold22G09714' => 'sas', 'SGA_v2.0_scaffold333G48992' => 'sas', 'SGA_v2.0_scaffold46G17491' => 'sas', 'SGA_v2.0_scaffold49G18294' => 'sas', 'SGA_v2.0_scaffold63G21658' => 'sas', 'SHI01741' => 'shi', 'SHI05771' => 'shi', 'SHI18077' => 'shi', 'SHI20525' => 'shi', 'SHI20527' => 'shi', 'SHI20528' => 'shi', 'SMO172G0185' => 'smo', 'SMO198G0020' => 'smo', 'SMO351G0006' => 'smo', 'SMO356G0118' => 'smo', 'SMO358G0296' => 'smo', 'SMO367G0079' => 'smo', 'SMO367G1277' => 'smo', 'Solyc01g014220.3' => 'sly', 'Solyc01g111770.2' => 'sly', 'Solyc02g078180.3' => 'sly', 'Solyc03g006430.3' => 'sly', 'Solyc03g006456.1' => 'sly', 'Solyc03g079860.2' => 'sly', 'Solyc04g079770.3' => 'sly', 'Solyc05g007430.4' => 'sly', 'Solyc07g063150.3' => 'sly', 'Solyc08g016620.3' => 'sly', 'Solyc09g057590.3' => 'sly', 'Solyc09g057600.1' => 'sly', 'Solyc10g009050.3' => 'sly', 'Solyc11g017420.2' => 'sly', 'Sopen01g053810' => 'spe', 'Sopen02g023040' => 'spe', 'Sopen03g002440' => 'spe', 'Sopen04g033350' => 'spe', 'Sopen05g003310' => 'spe', 'Sopen07g004050' => 'spe', 'Sopen07g031340' => 'spe', 'Sopen08g006990' => 'spe', 'Sopen10g004830' => 'spe', 'Sopen11g009370' => 'spe', 'Sp1g24450' => 'spa', 'Sp1g29670' => 'spa', 'Sp1g39600' => 'spa', 'Sp2g11080' => 'spa', 'Sp2g13970' => 'spa', 'Sp4g16130' => 'spa', 'Sp6g13080' => 'spa', 'Sp7g37270' => 'spa', 'TAR371G0065' => 'tar', 'TAR376G0340' => 'tar', 'TAR376G0435' => 'tar', 'TAR381G0002' => 'tar', 'TAR381G1236' => 'tar', 'TAR624G0055' => 'tar', 'TAR624G0324' => 'tar', 'TAR624G0696' => 'tar', 'TAR624G0906' => 'tar', 'TAR625G0107' => 'tar', 'TAR626G0015' => 'tar', 'TAR626G1356' => 'tar', 'TAR627G0888' => 'tar', 'TAR628G0399' => 'tar', 'TAR628G1327' => 'tar', 'TAR629G2831' => 'tar', 'TAR629G2874' => 'tar', 'TAR633G1432' => 'tar', 'TAR633G2771' => 'tar', 'THA.LOC104803394' => 'tha', 'THA.LOC104805153' => 'tha', 'THA.LOC104806784' => 'tha', 'THA.LOC104810473' => 'tha', 'THA.LOC104813100' => 'tha', 'THA.LOC104814215' => 'tha', 'THA.LOC104815554' => 'tha', 'THA.LOC104820544' => 'tha', 'THA.LOC104824754' => 'tha', 'THA.LOC104827717' => 'tha', 'Thecc.02G031400' => 'tca', 'Thecc.02G055900' => 'tca', 'Thecc.02G350800' => 'tca', 'Thecc.06G150900' => 'tca', 'Thecc.06G186600' => 'tca', 'Thecc.07G089600' => 'tca', 'Thecc.08G020400' => 'tca', 'Thecc.08G182100' => 'tca', 'Thhalv10000873m.g' => 'esa', 'Thhalv10004185m.g' => 'esa', 'Thhalv10006981m.g' => 'esa', 'Thhalv10007204m.g' => 'esa', 'Thhalv10011374m.g' => 'esa', 'Thhalv10013482m.g' => 'esa', 'Thhalv10017801m.g' => 'esa', 'Thhalv10024983m.g' => 'esa', 'TPR.G12072' => 'tpr', 'TPR.G15769' => 'tpr', 'TPR.G16504' => 'tpr', 'TPR.G16506' => 'tpr', 'TPR.G24345' => 'tpr', 'TPR.G26666' => 'tpr', 'TPR.G27320' => 'tpr', 'TPR.G31819' => 'tpr', 'TPR.G38879' => 'tpr', 'TPR.G39015' => 'tpr', 'TPR.G8819' => 'tpr', 'TWI09G0924' => 'twi', 'TWI12G0811' => 'twi', 'TWI12G1294' => 'twi', 'TWI31G0150' => 'twi', 'TWI36G1262' => 'twi', 'TWI38G1287' => 'twi', 'TWI38G1633' => 'twi', 'TWI38G1982' => 'twi', 'TWI39G0116' => 'twi', 'TWI60G1011' => 'twi', 'TWI63G0171' => 'twi', 'TWI73G0839' => 'twi', 'TWI79G1511' => 'twi', 'unitig_0.g915' => 'ugi', 'unitig_0.g916' => 'ugi', 'unitig_21.g20219' => 'ugi', 'unitig_21.g20416' => 'ugi', 'unitig_578.g16132' => 'ugi', 'unitig_578.g16718' => 'ugi', 'unitig_62.g23481' => 'ugi', 'unitig_744.g24535' => 'ugi', 'unitig_749.g13525' => 'ugi', 'vmacro01248' => 'vma', 'vmacro02290' => 'vma', 'vmacro10946' => 'vma', 'vmacro11865' => 'vma', 'vmacro12493' => 'vma', 'vmacro17322' => 'vma', 'vmacro21599' => 'vma', 'vmacro23041' => 'vma', 'VMungo0251G0004' => 'vmu', 'VMungo0251G2639' => 'vmu', 'VMungo0251G2967' => 'vmu', 'VMungo0540G0864' => 'vmu', 'VMungo0540G1569' => 'vmu', 'VMungo0647G0317' => 'vmu', 'VMungo0720G1373' => 'vmu', 'VMungo0720G1508' => 'vmu', 'VMungo1080G0485' => 'vmu', 'VMungo1215G3177' => 'vmu', 'Zm00001eb112600' => 'zma', 'Zm00001eb120220' => 'zma', 'Zm00001eb153240' => 'zma', 'Zm00001eb168880' => 'zma', 'Zm00001eb213920' => 'zma', 'Zm00001eb228280' => 'zma', 'Zm00001eb254580' => 'zma', 'Zm00001eb272180' => 'zma', 'Zm00001eb293190' => 'zma', 'Zm00001eb322930' => 'zma', 'Zm00001eb353360' => 'zma', 'Zm00001eb353390' => 'zma', 'Zm00001eb353430' => 'zma', 'Zm00001eb353440' => 'zma', 'Zm00001eb353780' => 'zma' ) $gf_id = 'HOM05D000499' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000499' ) $data_identifier = 'HOM05D000499' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 29, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 12, 'amhyb' => (int) 8, 'aly' => (int) 12, 'aox' => (int) 9, 'arhy' => (int) 26, 'ath' => (int) 8, 'atr' => (int) 7, 'acertr' => (int) 10, 'cqu' => (int) 15, 'bca' => (int) 29, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 11, 'cansat' => (int) 8, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 9, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 8, 'cpa' => (int) 10, 'csa' => (int) 7, 'camsi' => (int) 20, 'dca' => (int) 8, 'din' => (int) 12, 'dzi' => (int) 14, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 6, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 38, 'gra' => (int) 16, 'vvi' => (int) 8, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 5, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 11, 'lja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 11, 'mpo' => (int) 3, 'mbi' => (int) 14, 'mdo' => (int) 14, 'mtr' => (int) 8, 'cme' => (int) 9, 'egut' => (int) 9, 'ama' => (int) 11, 'nta' => (int) 17, 'nnu' => (int) 11, 'oeu' => (int) 18, 'osa' => (int) 8, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 6, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 9, 'rsi' => (int) 9, 'sbr' => (int) 10, 'sbo' => (int) 8, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 10, 'sas' => (int) 10, 'shi' => (int) 6, 'smo' => (int) 7, 'sly' => (int) 14, 'spe' => (int) 10, 'spa' => (int) 8, 'tar' => (int) 19, 'tha' => (int) 10, 'tca' => (int) 8, 'esa' => (int) 8, 'tpr' => (int) 11, 'twi' => (int) 13, 'ugi' => (int) 9, 'vma' => (int) 8, 'vmu' => (int) 10, 'zma' => (int) 15 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb353780' $species_info = array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ) $local_species = 'lsa' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000499', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1066', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p29780' => 'bna', 'A02p33180' => 'bna', 'A03p16470' => 'bna', 'A03p66010' => 'bna', 'A04p25970' => 'bna', 'A06p01270' => 'bna', 'A06p46080' => 'bna', 'A07p11400' => 'bna', 'A08p01840' => 'bna', 'A08p08230' => 'bna', 'A08p25740' => 'bna', 'A09p32070' => 'bna', 'A09p37830' => 'bna', 'A09p42840' => 'bna', 'A09p42850' => 'bna', 'Aa31LG10G2060' => 'aar', 'Aa31LG2G7410' => 'aar', 'Aa31LG6G10200' => 'aar', 'Aa31LG6G16680' => 'aar', 'Aa31LG6G8470' => 'aar', 'Aa31LG9G12730' => 'aar', 'Aa31LG9G13680' => 'aar', 'Aa31LG9G14920' => 'aar', 'Aa31LG9G6650' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4977' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5467' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3254' => 'aag', 'Actinidia02578' => 'ach', 'Actinidia07693' => 'ach', 'Actinidia08413' => 'ach', 'Actinidia08414' => 'ach', 'Actinidia15289' => 'ach', 'Actinidia19871' => 'ach', 'Actinidia21475' => 'ach', 'Actinidia22576' => 'ach', 'Actinidia28327' => 'ach', 'Actinidia32491' => 'ach', 'Actinidia39463' => 'ach', 'Actinidia39571' => 'ach', 'Ah.01g013750' => 'amhyb', 'Ah.01g023210' => 'amhyb', 'Ah.04g164850' => 'amhyb', 'Ah.05g178060' => 'amhyb', 'Ah.07g204270' => 'amhyb', 'Ah.07g208480' => 'amhyb', 'Ah.09g237410' => 'amhyb', 'Ah.14g089460' => 'amhyb', 'AL1G41790' => 'aly', 'AL1G49050' => 'aly', 'AL1G53810' => 'aly', 'AL1G61400' => 'aly', 'AL4G18580' => 'aly', 'AL5G12510' => 'aly', 'AL5G12540' => 'aly', 'AL6G43230' => 'aly', 'AL7G10370' => 'aly', 'AL7G19250' => 'aly', 'AL8G12240' => 'aly', 'AL8G18540' => 'aly', 'Aqoxy1G02409' => 'aox', 'Aqoxy2G03993' => 'aox', 'Aqoxy3G03357' => 'aox', 'Aqoxy4G00785' => 'aox', 'Aqoxy5G02598' => 'aox', 'Aqoxy6G00132' => 'aox', 'Aqoxy7G01776' => 'aox', 'Aqoxy7G02316' => 'aox', 'Aqoxy7G03973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.12AFKW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B8730' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27IQR1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3F75VG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3RE0GA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41TCQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.527VTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FIR39' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5W8UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DA38EV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ63HS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H1I32C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HC27T5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4M8AP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7N3CZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9UVDZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LS1NQA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT1D4B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SKC4TM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCFV76' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF9Q1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQWD9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1ZM88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WE07RT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YCK7VH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJE6Q6' => 'arhy', 'AT1G28240' => 'ath', 'AT1G34550' => 'ath', 'AT1G53040' => 'ath', 'AT2G02910' => 'ath', 'AT4G09630' => 'ath', 'AT4G38500' => 'ath', 'AT5G42660' => 'ath', 'AT5G46220' => 'ath', 'ATR0152G026' => 'atr', 'ATR0564G343' => 'atr', 'ATR0706G151' => 'atr', 'ATR0733G207' => 'atr', 'ATR0751G234' => 'atr', 'ATR0807G048' => 'atr', 'ATR1091G084' => 'atr', 'Atru.chr10.1229' => 'acertr', 'Atru.chr10.1230' => 'acertr', 'Atru.chr10.1874' => 'acertr', 'Atru.chr11.1808' => 'acertr', 'Atru.chr13.1795' => 'acertr', 'Atru.chr13.570' => 'acertr', 'Atru.chr2.2608' => 'acertr', 'Atru.chr2.2609' => 'acertr', 'Atru.chr5.3428' => 'acertr', 'Atru.chr8.1171' => 'acertr', 'AUR62004651' => 'cqu', 'AUR62008675' => 'cqu', 'AUR62010014' => 'cqu', 'AUR62013004' => 'cqu', 'AUR62014825' => 'cqu', 'AUR62015015' => 'cqu', 'AUR62015151' => 'cqu', 'AUR62017020' => 'cqu', 'AUR62019422' => 'cqu', 'AUR62023570' => 'cqu', 'AUR62025571' => 'cqu', 'AUR62029098' => 'cqu', 'AUR62033863' => 'cqu', 'AUR62034296' => 'cqu', 'AUR62040075' => 'cqu', 'BcaB02g07334' => 'bca', 'BcaB02g10575' => 'bca', 'BcaB03g12119' => 'bca', 'BcaB03g12120' => 'bca', 'BcaB03g13945' => 'bca', 'BcaB04g17123' => 'bca', 'BcaB04g17867' => 'bca', 'BcaB04g19839' => 'bca', 'BcaB07g30317' => 'bca', 'BcaB07g32432' => 'bca', 'BcaB07g33362' => 'bca', 'BcaB08g36611' => 'bca', 'BcaC01g00028' => 'bca', 'BcaC01g01356' => 'bca', 'BcaC01g02034' => 'bca', 'BcaC01g06051' => 'bca', 'BcaC03g16839' => 'bca', 'BcaC03g17176' => 'bca', 'BcaC05g26829' => 'bca', 'BcaC06g31490' => 'bca', 'BcaC06g35344' => 'bca', 'BcaC06g36570' => 'bca', 'BcaC07g37537' => 'bca', 'BcaC08g43491' => 'bca', 'BcaC08g43773' => 'bca', 'BcaNung00234' => 'bca', 'BcaNung01982' => 'bca', 'BcaNung03707' => 'bca', 'BcaNung06454' => 'bca', 'BolC2t10762H' => 'bol', 'BolC2t11191H' => 'bol', 'BolC3t14322H' => 'bol', 'BolC3t19747H' => 'bol', 'BolC3t21425H' => 'bol', 'BolC4t27800H' => 'bol', 'BolC5t31423H' => 'bol', 'BolC6t35951H' => 'bol', 'BolC6t36282H' => 'bol', 'BolC7t40678H' => 'bol', 'BolC7t40679H' => 'bol', 'BolC7t42222H' => 'bol', 'BolC7t43492H' => 'bol', 'BolC7t46785H' => 'bol', 'BolC8t47853H' => 'bol', 'BolC9t56805H' => 'bol', 'BraA02t08000Z' => 'bra', 'BraA02t08341Z' => 'bra', 'BraA03t10936Z' => 'bra', 'BraA03t15657Z' => 'bra', 'BraA04t18100Z' => 'bra', 'BraA05t20523Z' => 'bra', 'BraA06t23353Z' => 'bra', 'BraA06t27473Z' => 'bra', 'BraA06t27769Z' => 'bra', 'BraA07t28928Z' => 'bra', 'BraA08t32236Z' => 'bra', 'BraA08t32841Z' => 'bra', 'BraA08t34524Z' => 'bra', 'BraA09t38742Z' => 'bra', 'BraA09t39295Z' => 'bra', 'C02p47180' => 'bna', 'C02p50990' => 'bna', 'C03p19360' => 'bna', 'C03p74950' => 'bna', 'C03p91000' => 'bna', 'C04p63260' => 'bna', 'C05p27050' => 'bna', 'C06p08750' => 'bna', 'C06p11490' => 'bna', 'C07p02820' => 'bna', 'C07p17180' => 'bna', 'C07p29440' => 'bna', 'C07p63730' => 'bna', 'C09p39260' => 'bna', 'CAN.G1164.34' => 'can', 'CAN.G1164.39' => 'can', 'CAN.G1530.3' => 'can', 'CAN.G162.61' => 'can', 'CAN.G176.6' => 'can', 'CAN.G289.49' => 'can', 'CAN.G370.21' => 'can', 'CAN.G370.22' => 'can', 'CAN.G371.117' => 'can', 'CAN.G58.37' => 'can', 'CAN.G588.98' => 'can', 'CANSAT21G2266' => 'cansat', 'CANSAT25G2799' => 'cansat', 'CANSAT35G0862' => 'cansat', 'CANSAT35G1704' => 'cansat', 'CANSAT35G1760' => 'cansat', 'CANSAT56G3971' => 'cansat', 'CANSAT56G4116' => 'cansat', 'CANSAT80G1259' => 'cansat', 'CARHR027730' => 'chi', 'CARHR033880' => 'chi', 'CARHR043270' => 'chi', 'CARHR145330' => 'chi', 'CARHR145340' => 'chi', 'CARHR175570' => 'chi', 'CARHR181570' => 'chi', 'CARHR258470' => 'chi', 'CARHR260490' => 'chi', 'CARHR294220' => 'chi', 'Carub.0001s2668' => 'cru', 'Carub.0001s3257' => 'cru', 'Carub.0001s4220' => 'cru', 'Carub.0005s0179' => 'cru', 'Carub.0006s2807' => 'cru', 'Carub.0007s0039' => 'cru', 'Carub.0008s0169' => 'cru', 'Carub.0008s0636' => 'cru', 'Ca_00338_v3' => 'car', 'Ca_00542_v3' => 'car', 'Ca_01844_v3' => 'car', 'Ca_10611_v3' => 'car', 'Ca_13326_v3' => 'car', 'Ca_17944_v3' => 'car', 'Ca_18546_v3' => 'car', 'Ca_24219_v3' => 'car', 'Ca_29972_v3' => 'car', 'CBR_g3681' => 'cbr', 'CBR_g40021' => 'cbr', 'Cc01_g08140' => 'ccan', 'Cc02_g13410' => 'ccan', 'Cc02_g37480' => 'ccan', 'Cc05_g12030' => 'ccan', 'Cc09_g03370' => 'ccan', 'Cc09_g10300' => 'ccan', 'Cc10_g03530' => 'ccan', 'Cc10_g11380' => 'ccan', 'CDE01G0176' => 'cde', 'CDE02G0675' => 'cde', 'CDE02G0942' => 'cde', 'CDE02G1153' => 'cde', 'CDE02G4177' => 'cde', 'CDE04G2117' => 'cde', 'CDE04G2736' => 'cde', 'CDE08G1161' => 'cde', 'CDE09G1238' => 'cde', 'Cfa000467' => 'cfa', 'Cfa000947' => 'cfa', 'Cfa004969' => 'cfa', 'Cfa005284' => 'cfa', 'Cfa008993' => 'cfa', 'Cfa018187' => 'cfa', 'Cfa018454' => 'cfa', 'Cfa020585' => 'cfa', 'Ciclev10000424m.g' => 'ccl', 'Ciclev10003605m.g' => 'ccl', 'Ciclev10007828m.g' => 'ccl', 'Ciclev10014620m.g' => 'ccl', 'Ciclev10015169m.g' => 'ccl', 'Ciclev10018291m.g' => 'ccl', 'Ciclev10028256m.g' => 'ccl', 'Ciclev10033822m.g' => 'ccl', 'CiPaw.05G060300' => 'cil', 'CiPaw.05G085000' => 'cil', 'CiPaw.06G083700' => 'cil', 'CiPaw.06G120300' => 'cil', 'CiPaw.09G060500' => 'cil', 'CiPaw.09G123800' => 'cil', 'CiPaw.11G169700' => 'cil', 'CiPaw.12G118300' => 'cil', 'CiPaw.15G071000' => 'cil', 'CiPaw.15G081900' => 'cil', 'ClCG01G024610' => 'cla', 'ClCG03G006070' => 'cla', 'ClCG05G019250' => 'cla', 'ClCG09G009500' => 'cla', 'ClCG11G008200' => 'cla', 'ClCG11G018080' => 'cla', 'COL.COLO4_17373' => 'col', 'COL.COLO4_22994' => 'col', 'COL.COLO4_26389' => 'col', 'COL.COLO4_27170' => 'col', 'COL.COLO4_31074' => 'col', 'COL.COLO4_31465' => 'col', 'COL.COLO4_36438' => 'col', 'COL.COLO4_36439' => 'col', 'Cpa.g.c38781' => 'cpa', 'Cpa.g.sc128.12' => 'cpa', 'Cpa.g.sc166.7' => 'cpa', 'Cpa.g.sc166.8' => 'cpa', 'Cpa.g.sc20.111' => 'cpa', 'Cpa.g.sc27.31' => 'cpa', 'Cpa.g.sc64.36' => 'cpa', 'Cpa.g.sc64.37' => 'cpa', 'Cpa.g.sc66.49' => 'cpa', 'Cpa.g.sc80.64' => 'cpa', 'CsaV3_1G012320' => 'csa', 'CsaV3_2G008480' => 'csa', 'CsaV3_2G033450' => 'csa', 'CsaV3_3G044830' => 'csa', 'CsaV3_4G033710' => 'csa', 'CsaV3_6G051730' => 'csa', 'CsaV3_7G025350' => 'csa', 'CSS0001067' => 'camsi', 'CSS0005996' => 'camsi', 'CSS0006590' => 'camsi', 'CSS0009673' => 'camsi', 'CSS0010201' => 'camsi', 'CSS0010549' => 'camsi', 'CSS0011364' => 'camsi', 'CSS0014473' => 'camsi', 'CSS0014961' => 'camsi', 'CSS0020191' => 'camsi', 'CSS0021165' => 'camsi', 'CSS0022306' => 'camsi', 'CSS0030591' => 'camsi', 'CSS0030696' => 'camsi', 'CSS0032653' => 'camsi', 'CSS0037487' => 'camsi', 'CSS0041102' => 'camsi', 'CSS0041261' => 'camsi', 'CSS0046246' => 'camsi', 'CSS0049256' => 'camsi', 'DCAR_004075' => 'dca', 'DCAR_011538' => 'dca', 'DCAR_019553' => 'dca', 'DCAR_020952' => 'dca', 'DCAR_021739' => 'dca', 'DCAR_027407' => 'dca', 'DCAR_027913' => 'dca', 'DCAR_028066' => 'dca', 'Dinv05899' => 'din', 'Dinv07563' => 'din', 'Dinv08010' => 'din', 'Dinv14125' => 'din', 'Dinv20172' => 'din', 'Dinv30743' => 'din', 'Dinv31229' => 'din', 'Dinv34162' => 'din', 'Dinv36028' => 'din', 'Dinv39368' => 'din', 'Dinv40565' => 'din', 'Dinv41706' => 'din', 'Duzib052G0089' => 'dzi', 'Duzib116G0641' => 'dzi', 'Duzib132G0069' => 'dzi', 'Duzib132G1219' => 'dzi', 'Duzib147G0278' => 'dzi', 'Duzib160G0480' => 'dzi', 'Duzib170G0661' => 'dzi', 'Duzib177G0591' => 'dzi', 'Duzib187G1353' => 'dzi', 'Duzib192G0858' => 'dzi', 'Duzib192G0883' => 'dzi', 'Duzib213G0506' => 'dzi', 'Duzib235G0289' => 'dzi', 'Duzib251G0422' => 'dzi', 'ECA232G3898' => 'eca', 'ECA233G5950' => 'eca', 'ECA234G1699' => 'eca', 'ECA234G2421' => 'eca', 'ECA236G0426' => 'eca', 'ECA236G4331' => 'eca', 'ECA248G2573' => 'eca', 'EL10Ac1g00077' => 'bvu', 'EL10Ac1g01746' => 'bvu', 'EL10Ac2g03464' => 'bvu', 'EL10Ac4g08176' => 'bvu', 'EL10Ac7g17521' => 'bvu', 'EL10Ac8g20386' => 'bvu', 'EL10Ac9g21343' => 'bvu', 'EL10Ac9g22688' => 'bvu', 'Eucgr.B03434' => 'egr', 'Eucgr.D00618' => 'egr', 'Eucgr.E02395' => 'egr', 'Eucgr.F01129' => 'egr', 'Eucgr.F02622' => 'egr', 'Eucgr.F04207' => 'egr', 'FAN01G0570' => 'fan', 'FAN03G3351' => 'fan', 'FAN06G3702' => 'fan', 'FAN07G2149' => 'fan', 'FAN10G3758' => 'fan', 'FAN11G1170' => 'fan', 'FAN11G2050' => 'fan', 'FAN11G2724' => 'fan', 'FAN12G1700' => 'fan', 'FAN12G2028' => 'fan', 'FAN15G1160' => 'fan', 'FAN15G3063' => 'fan', 'FAN16G2540' => 'fan', 'FAN16G3077' => 'fan', 'FAN16G3624' => 'fan', 'FAN17G0221' => 'fan', 'FAN20G2492' => 'fan', 'FAN20G2905' => 'fan', 'FAN21G0548' => 'fan', 'FAN21G1300' => 'fan', 'FAN22G0077' => 'fan', 'FAN22G1315' => 'fan', 'FAN24G1280' => 'fan', 'FAN24G1445' => 'fan', 'FAN24G3527' => 'fan', 'FAN25G0464' => 'fan', 'FAN25G2885' => 'fan', 'FAN25G3270' => 'fan', 'FAN27G1101' => 'fan', 'FAN27G2846' => 'fan', 'FAN27G3524' => 'fan', 'FvH4_2g11770' => 'fve', 'FvH4_2g15630' => 'fve', 'FvH4_3g05570' => 'fve', 'FvH4_3g09110' => 'fve', 'FvH4_3g19940' => 'fve', 'FvH4_4g04821' => 'fve', 'FvH4_4g31480' => 'fve', 'FvH4_7g01740' => 'fve', 'Glyma.05G130400' => 'gma', 'Glyma.05G156400' => 'gma', 'Glyma.07G197000' => 'gma', 'Glyma.08G085151' => 'gma', 'Glyma.08G114500' => 'gma', 'Glyma.08G300400' => 'gma', 'Glyma.10G215800' => 'gma', 'Glyma.12G224400' => 'gma', 'Glyma.13G179300' => 'gma', 'Glyma.13G218151' => 'gma', 'Glyma.13G238800' => 'gma', 'Glyma.13G276900' => 'gma', 'Glyma.14G078200' => 'gma', 'Glyma.15G074500' => 'gma', 'Glyma.15G094100' => 'gma', 'Glyma.17G247200' => 'gma', 'Glyma.18G120100' => 'gma', 'Glyma.20G176000' => 'gma', 'Gohir.A01G063600' => 'ghi', 'Gohir.A01G170301' => 'ghi', 'Gohir.A02G060500' => 'ghi', 'Gohir.A05G133850' => 'ghi', 'Gohir.A05G161400' => 'ghi', 'Gohir.A06G012900' => 'ghi', 'Gohir.A06G035901' => 'ghi', 'Gohir.A06G127100' => 'ghi', 'Gohir.A06G210500' => 'ghi', 'Gohir.A08G008650' => 'ghi', 'Gohir.A09G072700' => 'ghi', 'Gohir.A09G088301' => 'ghi', 'Gohir.A10G040600' => 'ghi', 'Gohir.A12G036300' => 'ghi', 'Gohir.A12G143350' => 'ghi', 'Gohir.A12G165500' => 'ghi', 'Gohir.A13G145700' => 'ghi', 'Gohir.D01G050000' => 'ghi', 'Gohir.D01G051366' => 'ghi', 'Gohir.D01G161350' => 'ghi', 'Gohir.D02G065900' => 'ghi', 'Gohir.D05G164200' => 'ghi', 'Gohir.D05G355500' => 'ghi', 'Gohir.D06G010400' => 'ghi', 'Gohir.D06G111250' => 'ghi', 'Gohir.D06G132000' => 'ghi', 'Gohir.D06G210500' => 'ghi', 'Gohir.D07G165675' => 'ghi', 'Gohir.D08G062240' => 'ghi', 'Gohir.D08G086101' => 'ghi', 'Gohir.D08G138060' => 'ghi', 'Gohir.D09G072300' => 'ghi', 'Gohir.D10G041400' => 'ghi', 'Gohir.D11G191020' => 'ghi', 'Gohir.D11G212066' => 'ghi', 'Gohir.D12G036300' => 'ghi', 'Gohir.D12G168600' => 'ghi', 'Gohir.D13G150600' => 'ghi', 'Gorai.001G057300' => 'gra', 'Gorai.002G069900' => 'gra', 'Gorai.002G200000' => 'gra', 'Gorai.003G067600' => 'gra', 'Gorai.005G074800' => 'gra', 'Gorai.006G087300' => 'gra', 'Gorai.008G037500' => 'gra', 'Gorai.008G181400' => 'gra', 'Gorai.009G169400' => 'gra', 'Gorai.009G387900' => 'gra', 'Gorai.010G013300' => 'gra', 'Gorai.010G153800' => 'gra', 'Gorai.010G255800' => 'gra', 'Gorai.011G043700' => 'gra', 'Gorai.011G198900' => 'gra', 'Gorai.013G168400' => 'gra', 'GSVIVG01005212001' => 'vvi', 'GSVIVG01006163001' => 'vvi', 'GSVIVG01009625001' => 'vvi', 'GSVIVG01014338001' => 'vvi', 'GSVIVG01020005001' => 'vvi', 'GSVIVG01021450001' => 'vvi', 'GSVIVG01023975001' => 'vvi', 'GSVIVG01034490001' => 'vvi', 'HanXRQChr04g0112071' => 'han', 'HanXRQChr05g0131151' => 'han', 'HanXRQChr09g0262371' => 'han', 'HanXRQChr09g0268401' => 'han', 'HanXRQChr10g0279241' => 'han', 'HanXRQChr10g0297961' => 'han', 'HanXRQChr11g0326231' => 'han', 'HanXRQChr11g0328471' => 'han', 'HanXRQChr16g0507941' => 'han', 'HanXRQChr17g0560211' => 'han', 'Haze_02108' => 'cav', 'Haze_02428' => 'cav', 'Haze_05593' => 'cav', 'Haze_06448' => 'cav', 'Haze_09427' => 'cav', 'Haze_12022' => 'cav', 'Haze_17612' => 'cav', 'Haze_17928' => 'cav', 'Hma1.2p1_0032F.1_g019250' => 'hma', 'Hma1.2p1_0163F.1_g072690' => 'hma', 'Hma1.2p1_0265F.1_g106710' => 'hma', 'Hma1.2p1_0286F.1_g113970' => 'hma', 'Hma1.2p1_0363F.1_g136640' => 'hma', 'Hma1.2p1_0584F.1_g183470' => 'hma', 'Hma1.2p1_0885F.1_g232570' => 'hma', 'HPP92_006022' => 'vpl', 'HPP92_007320' => 'vpl', 'HPP92_011521' => 'vpl', 'HPP92_019387' => 'vpl', 'HPP92_024038' => 'vpl', 'Hund05891' => 'sun', 'Hund06450' => 'sun', 'Hund12053' => 'sun', 'Hund16800' => 'sun', 'Hund21222' => 'sun', 'Hund22896' => 'sun', 'Hund23746' => 'sun', 'Hund27083' => 'sun', 'Lalb_Chr02g0141831' => 'lal', 'Lalb_Chr02g0141841' => 'lal', 'Lalb_Chr05g0220411' => 'lal', 'Lalb_Chr06g0162081' => 'lal', 'Lalb_Chr09g0327651' => 'lal', 'Lalb_Chr13g0295051' => 'lal', 'Lalb_Chr15g0086801' => 'lal', 'Lalb_Chr16g0383781' => 'lal', 'Lalb_Chr16g0383791' => 'lal', 'Lalb_Chr18g0055441' => 'lal', 'Lalb_Chr18g0059611' => 'lal', 'Lalb_Chr20g0109661' => 'lal', 'Lalb_Chr20g0109831' => 'lal', 'Lalb_Chr20g0121871' => 'lal', 'Lalb_Chr22g0355361' => 'lal', 'Lalb_Chr25g0286371' => 'lal', 'Lj1A1187G43' => 'lonja', 'Lj1A1205T50' => 'lonja', 'Lj1A800G33' => 'lonja', 'Lj1C1187T7' => 'lonja', 'Lj1C843T11' => 'lonja', 'Lj1g0010940' => 'lja', 'Lj2A288T69' => 'lonja', 'Lj3g0024276' => 'lja', 'Lj4A47T76' => 'lonja', 'Lj4g0005805' => 'lja', 'Lj4g0006097' => 'lja', 'Lj4g0008528' => 'lja', 'Lj4g0024907' => 'lja', 'Lj5g0012472' => 'lja', 'Lj5g0018648' => 'lja', 'Lj6C789G1' => 'lonja', 'Lj6g0004000' => 'lja', 'Lj7A292G67' => 'lonja', 'Lj7A292T64' => 'lonja', 'Lj9A400T58' => 'lonja', 'Lsat_1_v5_gn_1_126181' => 'lsa', 'Lsat_1_v5_gn_4_123041' => 'lsa', 'Lsat_1_v5_gn_4_133620' => 'lsa', 'Lsat_1_v5_gn_4_53221' => 'lsa', 'Lsat_1_v5_gn_4_71961' => 'lsa', 'Lsat_1_v5_gn_7_105241' => 'lsa', 'Lsat_1_v5_gn_7_21361' => 'lsa', 'Lsat_1_v5_gn_7_28860' => 'lsa', 'Lsat_1_v5_gn_7_31260' => 'lsa', 'Lsat_1_v5_gn_8_52801' => 'lsa', 'Manes.02G191400' => 'mes', 'Manes.03G110100' => 'mes', 'Manes.04G071100' => 'mes', 'Manes.05G100500' => 'mes', 'Manes.05G164700' => 'mes', 'Manes.15G087000' => 'mes', 'Manes.15G121500' => 'mes', 'Manes.16G028300' => 'mes', 'Manes.17G046100' => 'mes', 'Manes.17G069800' => 'mes', 'Manes.18G100500' => 'mes', 'Mapoly0002s0109' => 'mpo', 'Mapoly0024s0007' => 'mpo', 'Mapoly0089s0032' => 'mpo', 'MBI04_g42241_MAGBIO' => 'mbi', 'MBI05_g11988_MAGBIO' => 'mbi', 'MBI05_g35452_MAGBIO' => 'mbi', 'MBI07_g30179_MAGBIO' => 'mbi', 'MBI07_g35859_MAGBIO' => 'mbi', 'MBI07_g35860_MAGBIO' => 'mbi', 'MBI07_g37166_MAGBIO' => 'mbi', 'MBI08_g18172_MAGBIO' => 'mbi', 'MBI09_g08441_MAGBIO' => 'mbi', 'MBI13_g01676_MAGBIO' => 'mbi', 'MBI14_g42955_MAGBIO' => 'mbi', 'MBI16_g13161_MAGBIO' => 'mbi', 'MBI17_g27204_MAGBIO' => 'mbi', 'MBI19_g21595_MAGBIO' => 'mbi', 'MD00G1148400' => 'mdo', 'MD02G1301200' => 'mdo', 'MD03G1227800' => 'mdo', 'MD05G1041100' => 'mdo', 'MD05G1124800' => 'mdo', 'MD05G1284000' => 'mdo', 'MD05G1338800' => 'mdo', 'MD05G1338900' => 'mdo', 'MD07G1022800' => 'mdo', 'MD10G1047500' => 'mdo', 'MD10G1127500' => 'mdo', 'MD10G1262300' => 'mdo', 'MD10G1293800' => 'mdo', 'MD16G1074300' => 'mdo', 'Medtr1g021670' => 'mtr', 'Medtr1g096320' => 'mtr', 'Medtr2g013690' => 'mtr', 'Medtr2g019450' => 'mtr', 'Medtr2g085170' => 'mtr', 'Medtr4g088785' => 'mtr', 'Medtr8g055930' => 'mtr', 'Medtr8g085850' => 'mtr', 'MELO3C002605.2' => 'cme', 'MELO3C003891.2' => 'cme', 'MELO3C004012.2' => 'cme', 'MELO3C007134.2' => 'cme', 'MELO3C008118.2' => 'cme', 'MELO3C016700.2' => 'cme', 'MELO3C024127.2' => 'cme', 'MELO3C033361.2' => 'cme', 'MELO3C033362.2' => 'cme', 'Migut.C00430' => 'egut', 'Migut.C01246' => 'egut', 'Migut.E00101' => 'egut', 'Migut.H01486' => 'egut', 'Migut.H01939' => 'egut', 'Migut.K00360' => 'egut', 'Migut.M00910' => 'egut', 'Migut.M01139' => 'egut', 'Migut.N02677' => 'egut', 'MSTRG.13252' => 'ama', 'MSTRG.14701' => 'ama', 'MSTRG.1521' => 'ama', 'MSTRG.15884' => 'ama', 'MSTRG.16242' => 'ama', 'MSTRG.22285' => 'ama', 'MSTRG.22444' => 'ama', 'MSTRG.2349' => 'ama', 'MSTRG.26308' => 'ama', 'MSTRG.28296' => 'ama', 'MSTRG.9895' => 'ama', 'Nitab4.5_0000110g0060' => 'nta', 'Nitab4.5_0000420g0130' => 'nta', 'Nitab4.5_0000422g0030' => 'nta', 'Nitab4.5_0000560g0180' => 'nta', 'Nitab4.5_0000703g0100' => 'nta', 'Nitab4.5_0000786g0200' => 'nta', 'Nitab4.5_0001336g0020' => 'nta', 'Nitab4.5_0001796g0030' => 'nta', 'Nitab4.5_0003348g0060' => 'nta', 'Nitab4.5_0003698g0040' => 'nta', 'Nitab4.5_0003942g0090' => 'nta', 'Nitab4.5_0004775g0070' => 'nta', 'Nitab4.5_0004864g0030' => 'nta', 'Nitab4.5_0005615g0020' => 'nta', 'Nitab4.5_0009288g0030' => 'nta', 'Nitab4.5_0009341g0010' => 'nta', 'Nitab4.5_0009535g0010' => 'nta', 'Nn1g03995' => 'nnu', 'Nn1g04100' => 'nnu', 'Nn1g06530' => 'nnu', 'Nn3g16404' => 'nnu', 'Nn3g17212' => 'nnu', 'Nn3g20776' => 'nnu', 'Nn3g21923' => 'nnu', 'Nn5g27737' => 'nnu', 'Nn5g29461' => 'nnu', 'Nn7g38355' => 'nnu', 'Nn8g39873' => 'nnu', 'Oeu000548.2' => 'oeu', 'Oeu004672.1' => 'oeu', 'Oeu015605.2' => 'oeu', 'Oeu016092.1' => 'oeu', 'Oeu017879.3' => 'oeu', 'Oeu024910.1' => 'oeu', 'Oeu028965.1' => 'oeu', 'Oeu031269.1' => 'oeu', 'Oeu031270.1' => 'oeu', 'Oeu032535.1' => 'oeu', 'Oeu034151.1' => 'oeu', 'Oeu034152.1' => 'oeu', 'Oeu034588.2' => 'oeu', 'Oeu050846.1' => 'oeu', 'Oeu050849.2' => 'oeu', 'Oeu051063.2' => 'oeu', 'Oeu052368.1' => 'oeu', 'Oeu052370.1' => 'oeu', 'Os01g0210400' => 'osa', 'Os01g0304300' => 'osa', 'Os01g0749100' => 'osa', 'Os02g0745800' => 'osa', 'Os03g0769050' => 'osa', 'Os05g0531500' => 'osa', 'Os06g0724300' => 'osa', 'Os11g0198100' => 'osa', 'Peaxi162Scf00069g01425' => 'pax', 'Peaxi162Scf00280g00811' => 'pax', 'Peaxi162Scf00310g00615' => 'pax', 'Peaxi162Scf00362g00542' => 'pax', 'Peaxi162Scf00461g00310' => 'pax', 'Peaxi162Scf00530g00118' => 'pax', 'Peaxi162Scf00541g00057' => 'pax', 'Peaxi162Scf00661g00017' => 'pax', 'Peaxi162Scf00926g00027' => 'pax', 'Peaxi162Scf01064g00263' => 'pax', 'Peaxi162Scf01211g00135' => 'pax', 'PGR004G2336' => 'pgr', 'PGR042G0327' => 'pgr', 'PGR042G1957' => 'pgr', 'PGR042G2003' => 'pgr', 'PGR042G3929' => 'pgr', 'PGR083G1137' => 'pgr', 'PGR083G1364' => 'pgr', 'PGSC0003DMG400003381' => 'stu', 'PGSC0003DMG400003417' => 'stu', 'PGSC0003DMG400008981' => 'stu', 'PGSC0003DMG400012417' => 'stu', 'PGSC0003DMG400012823' => 'stu', 'PGSC0003DMG400016885' => 'stu', 'PGSC0003DMG400022812' => 'stu', 'PGSC0003DMG400029726' => 'stu', 'PGSC0003DMG401009243' => 'stu', 'PGSC0003DMG401031505' => 'stu', 'PGSC0003DMG402031505' => 'stu', 'Phvul.001G017600' => 'pvu', 'Phvul.002G193500' => 'pvu', 'Phvul.002G228900' => 'pvu', 'Phvul.002G236800' => 'pvu', 'Phvul.003G049500' => 'pvu', 'Phvul.005G072000' => 'pvu', 'Phvul.006G164800' => 'pvu', 'Phvul.006G185100' => 'pvu', 'Phvul.007G090000' => 'pvu', 'Potri.001G399800' => 'ptr', 'Potri.002G149900' => 'ptr', 'Potri.004G044100' => 'ptr', 'Potri.004G177600' => 'ptr', 'Potri.009G138000' => 'ptr', 'Potri.010G094000' => 'ptr', 'Potri.011G053000' => 'ptr', 'Potri.011G119300' => 'ptr', 'Potri.013G113700' => 'ptr', 'Potri.018G107800' => 'ptr', 'Potri.019G084100' => 'ptr', 'Pp3c14_23720' => 'ppa', 'Pp3c16_6340' => 'ppa', 'Pp3c23_13420' => 'ppa', 'Pp3c24_2740' => 'ppa', 'Pp3c25_860' => 'ppa', 'Pp3c8_21750' => 'ppa', 'Prupe.1G273000' => 'ppe', 'Prupe.1G273700' => 'ppe', 'Prupe.1G274100' => 'ppe', 'Prupe.2G023300' => 'ppe', 'Prupe.4G048000' => 'ppe', 'Prupe.4G080400' => 'ppe', 'Prupe.4G181200' => 'ppe', 'Prupe.8G056900' => 'ppe', 'Prupe.8G168700' => 'ppe', 'Psat1g189080' => 'psa', 'Psat1g204760' => 'psa', 'Psat4g175560' => 'psa', 'Psat4g177720' => 'psa', 'Psat5g244240' => 'psa', 'Psat6g010720' => 'psa', 'Psat6g187200' => 'psa', 'Psat7g072040' => 'psa', 'PSO017G3501' => 'pso', 'PSO063G2148' => 'pso', 'PSO063G5608' => 'pso', 'PSO210G6392' => 'pso', 'PSO541G2319' => 'pso', 'PSO541G2836' => 'pso', 'PSO541G4012' => 'pso', 'PSO541G6253' => 'pso', 'PSO675G0580' => 'pso', 'PSO675G0856' => 'pso', 'PSO675G5635' => 'pso', 'PSO675G9157' => 'pso', 'PSO832G1660' => 'pso', 'PSO832G1969' => 'pso', 'QL02p007186' => 'qlo', 'QL02p033904' => 'qlo', 'QL03p064391' => 'qlo', 'QL05p040593' => 'qlo', 'QL05p058242' => 'qlo', 'QL08p021825' => 'qlo', 'QL11p004981' => 'qlo', 'RcHm_v2.0_Chr1g0318301' => 'rch', 'RcHm_v2.0_Chr4g0418501' => 'rch', 'RcHm_v2.0_Chr4g0439971' => 'rch', 'RcHm_v2.0_Chr5g0008541' => 'rch', 'RcHm_v2.0_Chr5g0014101' => 'rch', 'RcHm_v2.0_Chr5g0014131' => 'rch', 'RcHm_v2.0_Chr5g0033621' => 'rch', 'RcHm_v2.0_Chr6g0272041' => 'rch', 'RcHm_v2.0_Chr6g0278831' => 'rch', 'Rhsim02G0130400' => 'rsi', 'Rhsim02G0171100' => 'rsi', 'Rhsim05G0053000' => 'rsi', 'Rhsim05G0053100' => 'rsi', 'Rhsim06G0096500' => 'rsi', 'Rhsim06G0096600' => 'rsi', 'Rhsim06G0199100' => 'rsi', 'Rhsim12G0062300' => 'rsi', 'Rhsim12G0062800' => 'rsi', 'Sabra02G0118600' => 'sbr', 'Sabra04G0027300' => 'sbr', 'Sabra04G0119500' => 'sbr', 'Sabra08G0112500' => 'sbr', 'Sabra11G0036800' => 'sbr', 'Sabra11G0103800' => 'sbr', 'Sabra13G0096300' => 'sbr', 'Sabra16G0262300' => 'sbr', 'Sabra18G0091700' => 'sbr', 'Sabra19G0095400' => 'sbr', 'SalBow6G3080' => 'sbo', 'SalBow7G1157' => 'sbo', 'SalBow7G2123' => 'sbo', 'SalBow7G2285' => 'sbo', 'SalBow7G3537' => 'sbo', 'SalBow8G2947' => 'sbo', 'SalBow8G4463' => 'sbo', 'SalBow8G5466' => 'sbo', 'Sc01g0001750' => 'sci', 'Sc02g0006640' => 'sci', 'Sc02g0006670' => 'sci', 'Sc04g0008220' => 'sci', 'Sc05g0006190' => 'sci', 'Sc08g0002760' => 'sci', 'Sc17g0006170' => 'sci', 'Sc22g0002050' => 'sci', 'Sc23g0001190' => 'sci', 'Sc24g0000980' => 'sci', 'Sed0006245' => 'sed', 'Sed0007543' => 'sed', 'Sed0009411' => 'sed', 'Sed0010765' => 'sed', 'Sed0012944' => 'sed', 'Sed0014682' => 'sed', 'Sed0016174' => 'sed', 'Sed0016796' => 'sed', 'Sed0020317' => 'sed', 'Sed0021467' => 'sed', 'SEGI_01316' => 'sgi', 'SEGI_03374' => 'sgi', 'SEGI_16265' => 'sgi', 'SEGI_18569' => 'sgi', 'SEGI_20351' => 'sgi', 'SEGI_26395' => 'sgi', 'SEGI_29469' => 'sgi', 'SEGI_34771' => 'sgi', 'SEGI_36769' => 'sgi', 'SEGI_37139' => 'sgi', 'SGA_v2.0_scaffold100G29687' => 'sas', 'SGA_v2.0_scaffold118G32472' => 'sas', 'SGA_v2.0_scaffold14G07051' => 'sas', 'SGA_v2.0_scaffold183G39845' => 'sas', 'SGA_v2.0_scaffold1G00174' => 'sas', 'SGA_v2.0_scaffold22G09714' => 'sas', 'SGA_v2.0_scaffold333G48992' => 'sas', 'SGA_v2.0_scaffold46G17491' => 'sas', 'SGA_v2.0_scaffold49G18294' => 'sas', 'SGA_v2.0_scaffold63G21658' => 'sas', 'SHI01741' => 'shi', 'SHI05771' => 'shi', 'SHI18077' => 'shi', 'SHI20525' => 'shi', 'SHI20527' => 'shi', 'SHI20528' => 'shi', 'SMO172G0185' => 'smo', 'SMO198G0020' => 'smo', 'SMO351G0006' => 'smo', 'SMO356G0118' => 'smo', 'SMO358G0296' => 'smo', 'SMO367G0079' => 'smo', 'SMO367G1277' => 'smo', 'Solyc01g014220.3' => 'sly', 'Solyc01g111770.2' => 'sly', 'Solyc02g078180.3' => 'sly', 'Solyc03g006430.3' => 'sly', 'Solyc03g006456.1' => 'sly', 'Solyc03g079860.2' => 'sly', 'Solyc04g079770.3' => 'sly', 'Solyc05g007430.4' => 'sly', 'Solyc07g063150.3' => 'sly', 'Solyc08g016620.3' => 'sly', 'Solyc09g057590.3' => 'sly', 'Solyc09g057600.1' => 'sly', 'Solyc10g009050.3' => 'sly', 'Solyc11g017420.2' => 'sly', 'Sopen01g053810' => 'spe', 'Sopen02g023040' => 'spe', 'Sopen03g002440' => 'spe', 'Sopen04g033350' => 'spe', 'Sopen05g003310' => 'spe', 'Sopen07g004050' => 'spe', 'Sopen07g031340' => 'spe', 'Sopen08g006990' => 'spe', 'Sopen10g004830' => 'spe', 'Sopen11g009370' => 'spe', 'Sp1g24450' => 'spa', 'Sp1g29670' => 'spa', 'Sp1g39600' => 'spa', 'Sp2g11080' => 'spa', 'Sp2g13970' => 'spa', 'Sp4g16130' => 'spa', 'Sp6g13080' => 'spa', 'Sp7g37270' => 'spa', 'TAR371G0065' => 'tar', 'TAR376G0340' => 'tar', 'TAR376G0435' => 'tar', 'TAR381G0002' => 'tar', 'TAR381G1236' => 'tar', 'TAR624G0055' => 'tar', 'TAR624G0324' => 'tar', 'TAR624G0696' => 'tar', 'TAR624G0906' => 'tar', 'TAR625G0107' => 'tar', 'TAR626G0015' => 'tar', 'TAR626G1356' => 'tar', 'TAR627G0888' => 'tar', 'TAR628G0399' => 'tar', 'TAR628G1327' => 'tar', 'TAR629G2831' => 'tar', 'TAR629G2874' => 'tar', 'TAR633G1432' => 'tar', 'TAR633G2771' => 'tar', 'THA.LOC104803394' => 'tha', 'THA.LOC104805153' => 'tha', 'THA.LOC104806784' => 'tha', 'THA.LOC104810473' => 'tha', 'THA.LOC104813100' => 'tha', 'THA.LOC104814215' => 'tha', 'THA.LOC104815554' => 'tha', 'THA.LOC104820544' => 'tha', 'THA.LOC104824754' => 'tha', 'THA.LOC104827717' => 'tha', 'Thecc.02G031400' => 'tca', 'Thecc.02G055900' => 'tca', 'Thecc.02G350800' => 'tca', 'Thecc.06G150900' => 'tca', 'Thecc.06G186600' => 'tca', 'Thecc.07G089600' => 'tca', 'Thecc.08G020400' => 'tca', 'Thecc.08G182100' => 'tca', 'Thhalv10000873m.g' => 'esa', 'Thhalv10004185m.g' => 'esa', 'Thhalv10006981m.g' => 'esa', 'Thhalv10007204m.g' => 'esa', 'Thhalv10011374m.g' => 'esa', 'Thhalv10013482m.g' => 'esa', 'Thhalv10017801m.g' => 'esa', 'Thhalv10024983m.g' => 'esa', 'TPR.G12072' => 'tpr', 'TPR.G15769' => 'tpr', 'TPR.G16504' => 'tpr', 'TPR.G16506' => 'tpr', 'TPR.G24345' => 'tpr', 'TPR.G26666' => 'tpr', 'TPR.G27320' => 'tpr', 'TPR.G31819' => 'tpr', 'TPR.G38879' => 'tpr', 'TPR.G39015' => 'tpr', 'TPR.G8819' => 'tpr', 'TWI09G0924' => 'twi', 'TWI12G0811' => 'twi', 'TWI12G1294' => 'twi', 'TWI31G0150' => 'twi', 'TWI36G1262' => 'twi', 'TWI38G1287' => 'twi', 'TWI38G1633' => 'twi', 'TWI38G1982' => 'twi', 'TWI39G0116' => 'twi', 'TWI60G1011' => 'twi', 'TWI63G0171' => 'twi', 'TWI73G0839' => 'twi', 'TWI79G1511' => 'twi', 'unitig_0.g915' => 'ugi', 'unitig_0.g916' => 'ugi', 'unitig_21.g20219' => 'ugi', 'unitig_21.g20416' => 'ugi', 'unitig_578.g16132' => 'ugi', 'unitig_578.g16718' => 'ugi', 'unitig_62.g23481' => 'ugi', 'unitig_744.g24535' => 'ugi', 'unitig_749.g13525' => 'ugi', 'vmacro01248' => 'vma', 'vmacro02290' => 'vma', 'vmacro10946' => 'vma', 'vmacro11865' => 'vma', 'vmacro12493' => 'vma', 'vmacro17322' => 'vma', 'vmacro21599' => 'vma', 'vmacro23041' => 'vma', 'VMungo0251G0004' => 'vmu', 'VMungo0251G2639' => 'vmu', 'VMungo0251G2967' => 'vmu', 'VMungo0540G0864' => 'vmu', 'VMungo0540G1569' => 'vmu', 'VMungo0647G0317' => 'vmu', 'VMungo0720G1373' => 'vmu', 'VMungo0720G1508' => 'vmu', 'VMungo1080G0485' => 'vmu', 'VMungo1215G3177' => 'vmu', 'Zm00001eb112600' => 'zma', 'Zm00001eb120220' => 'zma', 'Zm00001eb153240' => 'zma', 'Zm00001eb168880' => 'zma', 'Zm00001eb213920' => 'zma', 'Zm00001eb228280' => 'zma', 'Zm00001eb254580' => 'zma', 'Zm00001eb272180' => 'zma', 'Zm00001eb293190' => 'zma', 'Zm00001eb322930' => 'zma', 'Zm00001eb353360' => 'zma', 'Zm00001eb353390' => 'zma', 'Zm00001eb353430' => 'zma', 'Zm00001eb353440' => 'zma', 'Zm00001eb353780' => 'zma' ), 'gf_id' => 'HOM05D000499', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000499' ), 'data_identifier' => 'HOM05D000499', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000499', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1066', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p29780' => 'bna', 'A02p33180' => 'bna', 'A03p16470' => 'bna', 'A03p66010' => 'bna', 'A04p25970' => 'bna', 'A06p01270' => 'bna', 'A06p46080' => 'bna', 'A07p11400' => 'bna', 'A08p01840' => 'bna', 'A08p08230' => 'bna', 'A08p25740' => 'bna', 'A09p32070' => 'bna', 'A09p37830' => 'bna', 'A09p42840' => 'bna', 'A09p42850' => 'bna', 'Aa31LG10G2060' => 'aar', 'Aa31LG2G7410' => 'aar', 'Aa31LG6G10200' => 'aar', 'Aa31LG6G16680' => 'aar', 'Aa31LG6G8470' => 'aar', 'Aa31LG9G12730' => 'aar', 'Aa31LG9G13680' => 'aar', 'Aa31LG9G14920' => 'aar', 'Aa31LG9G6650' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4977' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5467' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3254' => 'aag', 'Actinidia02578' => 'ach', 'Actinidia07693' => 'ach', 'Actinidia08413' => 'ach', 'Actinidia08414' => 'ach', 'Actinidia15289' => 'ach', 'Actinidia19871' => 'ach', 'Actinidia21475' => 'ach', 'Actinidia22576' => 'ach', 'Actinidia28327' => 'ach', 'Actinidia32491' => 'ach', 'Actinidia39463' => 'ach', 'Actinidia39571' => 'ach', 'Ah.01g013750' => 'amhyb', 'Ah.01g023210' => 'amhyb', 'Ah.04g164850' => 'amhyb', 'Ah.05g178060' => 'amhyb', 'Ah.07g204270' => 'amhyb', 'Ah.07g208480' => 'amhyb', 'Ah.09g237410' => 'amhyb', 'Ah.14g089460' => 'amhyb', 'AL1G41790' => 'aly', 'AL1G49050' => 'aly', 'AL1G53810' => 'aly', 'AL1G61400' => 'aly', 'AL4G18580' => 'aly', 'AL5G12510' => 'aly', 'AL5G12540' => 'aly', 'AL6G43230' => 'aly', 'AL7G10370' => 'aly', 'AL7G19250' => 'aly', 'AL8G12240' => 'aly', 'AL8G18540' => 'aly', 'Aqoxy1G02409' => 'aox', 'Aqoxy2G03993' => 'aox', 'Aqoxy3G03357' => 'aox', 'Aqoxy4G00785' => 'aox', 'Aqoxy5G02598' => 'aox', 'Aqoxy6G00132' => 'aox', 'Aqoxy7G01776' => 'aox', 'Aqoxy7G02316' => 'aox', 'Aqoxy7G03973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.12AFKW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B8730' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27IQR1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3F75VG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3RE0GA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41TCQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.527VTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FIR39' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5W8UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DA38EV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ63HS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H1I32C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HC27T5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4M8AP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7N3CZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9UVDZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LS1NQA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT1D4B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SKC4TM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCFV76' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF9Q1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQWD9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1ZM88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WE07RT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YCK7VH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJE6Q6' => 'arhy', 'AT1G28240' => 'ath', 'AT1G34550' => 'ath', 'AT1G53040' => 'ath', 'AT2G02910' => 'ath', 'AT4G09630' => 'ath', 'AT4G38500' => 'ath', 'AT5G42660' => 'ath', 'AT5G46220' => 'ath', 'ATR0152G026' => 'atr', 'ATR0564G343' => 'atr', 'ATR0706G151' => 'atr', 'ATR0733G207' => 'atr', 'ATR0751G234' => 'atr', 'ATR0807G048' => 'atr', 'ATR1091G084' => 'atr', 'Atru.chr10.1229' => 'acertr', 'Atru.chr10.1230' => 'acertr', 'Atru.chr10.1874' => 'acertr', 'Atru.chr11.1808' => 'acertr', 'Atru.chr13.1795' => 'acertr', 'Atru.chr13.570' => 'acertr', 'Atru.chr2.2608' => 'acertr', 'Atru.chr2.2609' => 'acertr', 'Atru.chr5.3428' => 'acertr', 'Atru.chr8.1171' => 'acertr', 'AUR62004651' => 'cqu', 'AUR62008675' => 'cqu', 'AUR62010014' => 'cqu', 'AUR62013004' => 'cqu', 'AUR62014825' => 'cqu', 'AUR62015015' => 'cqu', 'AUR62015151' => 'cqu', 'AUR62017020' => 'cqu', 'AUR62019422' => 'cqu', 'AUR62023570' => 'cqu', 'AUR62025571' => 'cqu', 'AUR62029098' => 'cqu', 'AUR62033863' => 'cqu', 'AUR62034296' => 'cqu', 'AUR62040075' => 'cqu', 'BcaB02g07334' => 'bca', 'BcaB02g10575' => 'bca', 'BcaB03g12119' => 'bca', 'BcaB03g12120' => 'bca', 'BcaB03g13945' => 'bca', 'BcaB04g17123' => 'bca', 'BcaB04g17867' => 'bca', 'BcaB04g19839' => 'bca', 'BcaB07g30317' => 'bca', 'BcaB07g32432' => 'bca', 'BcaB07g33362' => 'bca', 'BcaB08g36611' => 'bca', 'BcaC01g00028' => 'bca', 'BcaC01g01356' => 'bca', 'BcaC01g02034' => 'bca', 'BcaC01g06051' => 'bca', 'BcaC03g16839' => 'bca', 'BcaC03g17176' => 'bca', 'BcaC05g26829' => 'bca', 'BcaC06g31490' => 'bca', 'BcaC06g35344' => 'bca', 'BcaC06g36570' => 'bca', 'BcaC07g37537' => 'bca', 'BcaC08g43491' => 'bca', 'BcaC08g43773' => 'bca', 'BcaNung00234' => 'bca', 'BcaNung01982' => 'bca', 'BcaNung03707' => 'bca', 'BcaNung06454' => 'bca', 'BolC2t10762H' => 'bol', 'BolC2t11191H' => 'bol', 'BolC3t14322H' => 'bol', 'BolC3t19747H' => 'bol', 'BolC3t21425H' => 'bol', 'BolC4t27800H' => 'bol', 'BolC5t31423H' => 'bol', 'BolC6t35951H' => 'bol', 'BolC6t36282H' => 'bol', 'BolC7t40678H' => 'bol', 'BolC7t40679H' => 'bol', 'BolC7t42222H' => 'bol', 'BolC7t43492H' => 'bol', 'BolC7t46785H' => 'bol', 'BolC8t47853H' => 'bol', 'BolC9t56805H' => 'bol', 'BraA02t08000Z' => 'bra', 'BraA02t08341Z' => 'bra', 'BraA03t10936Z' => 'bra', 'BraA03t15657Z' => 'bra', 'BraA04t18100Z' => 'bra', 'BraA05t20523Z' => 'bra', 'BraA06t23353Z' => 'bra', 'BraA06t27473Z' => 'bra', 'BraA06t27769Z' => 'bra', 'BraA07t28928Z' => 'bra', 'BraA08t32236Z' => 'bra', 'BraA08t32841Z' => 'bra', 'BraA08t34524Z' => 'bra', 'BraA09t38742Z' => 'bra', 'BraA09t39295Z' => 'bra', 'C02p47180' => 'bna', 'C02p50990' => 'bna', 'C03p19360' => 'bna', 'C03p74950' => 'bna', 'C03p91000' => 'bna', 'C04p63260' => 'bna', 'C05p27050' => 'bna', 'C06p08750' => 'bna', 'C06p11490' => 'bna', 'C07p02820' => 'bna', 'C07p17180' => 'bna', 'C07p29440' => 'bna', 'C07p63730' => 'bna', 'C09p39260' => 'bna', 'CAN.G1164.34' => 'can', 'CAN.G1164.39' => 'can', 'CAN.G1530.3' => 'can', 'CAN.G162.61' => 'can', 'CAN.G176.6' => 'can', 'CAN.G289.49' => 'can', 'CAN.G370.21' => 'can', 'CAN.G370.22' => 'can', 'CAN.G371.117' => 'can', 'CAN.G58.37' => 'can', 'CAN.G588.98' => 'can', 'CANSAT21G2266' => 'cansat', 'CANSAT25G2799' => 'cansat', 'CANSAT35G0862' => 'cansat', 'CANSAT35G1704' => 'cansat', 'CANSAT35G1760' => 'cansat', 'CANSAT56G3971' => 'cansat', 'CANSAT56G4116' => 'cansat', 'CANSAT80G1259' => 'cansat', 'CARHR027730' => 'chi', 'CARHR033880' => 'chi', 'CARHR043270' => 'chi', 'CARHR145330' => 'chi', 'CARHR145340' => 'chi', 'CARHR175570' => 'chi', 'CARHR181570' => 'chi', 'CARHR258470' => 'chi', 'CARHR260490' => 'chi', 'CARHR294220' => 'chi', 'Carub.0001s2668' => 'cru', 'Carub.0001s3257' => 'cru', 'Carub.0001s4220' => 'cru', 'Carub.0005s0179' => 'cru', 'Carub.0006s2807' => 'cru', 'Carub.0007s0039' => 'cru', 'Carub.0008s0169' => 'cru', 'Carub.0008s0636' => 'cru', 'Ca_00338_v3' => 'car', 'Ca_00542_v3' => 'car', 'Ca_01844_v3' => 'car', 'Ca_10611_v3' => 'car', 'Ca_13326_v3' => 'car', 'Ca_17944_v3' => 'car', 'Ca_18546_v3' => 'car', 'Ca_24219_v3' => 'car', 'Ca_29972_v3' => 'car', 'CBR_g3681' => 'cbr', 'CBR_g40021' => 'cbr', 'Cc01_g08140' => 'ccan', 'Cc02_g13410' => 'ccan', 'Cc02_g37480' => 'ccan', 'Cc05_g12030' => 'ccan', 'Cc09_g03370' => 'ccan', 'Cc09_g10300' => 'ccan', 'Cc10_g03530' => 'ccan', 'Cc10_g11380' => 'ccan', 'CDE01G0176' => 'cde', 'CDE02G0675' => 'cde', 'CDE02G0942' => 'cde', 'CDE02G1153' => 'cde', 'CDE02G4177' => 'cde', 'CDE04G2117' => 'cde', 'CDE04G2736' => 'cde', 'CDE08G1161' => 'cde', 'CDE09G1238' => 'cde', 'Cfa000467' => 'cfa', 'Cfa000947' => 'cfa', 'Cfa004969' => 'cfa', 'Cfa005284' => 'cfa', 'Cfa008993' => 'cfa', 'Cfa018187' => 'cfa', 'Cfa018454' => 'cfa', 'Cfa020585' => 'cfa', 'Ciclev10000424m.g' => 'ccl', 'Ciclev10003605m.g' => 'ccl', 'Ciclev10007828m.g' => 'ccl', 'Ciclev10014620m.g' => 'ccl', 'Ciclev10015169m.g' => 'ccl', 'Ciclev10018291m.g' => 'ccl', 'Ciclev10028256m.g' => 'ccl', 'Ciclev10033822m.g' => 'ccl', 'CiPaw.05G060300' => 'cil', 'CiPaw.05G085000' => 'cil', 'CiPaw.06G083700' => 'cil', 'CiPaw.06G120300' => 'cil', 'CiPaw.09G060500' => 'cil', 'CiPaw.09G123800' => 'cil', 'CiPaw.11G169700' => 'cil', 'CiPaw.12G118300' => 'cil', 'CiPaw.15G071000' => 'cil', 'CiPaw.15G081900' => 'cil', 'ClCG01G024610' => 'cla', 'ClCG03G006070' => 'cla', 'ClCG05G019250' => 'cla', 'ClCG09G009500' => 'cla', 'ClCG11G008200' => 'cla', 'ClCG11G018080' => 'cla', 'COL.COLO4_17373' => 'col', 'COL.COLO4_22994' => 'col', 'COL.COLO4_26389' => 'col', 'COL.COLO4_27170' => 'col', 'COL.COLO4_31074' => 'col', 'COL.COLO4_31465' => 'col', 'COL.COLO4_36438' => 'col', 'COL.COLO4_36439' => 'col', 'Cpa.g.c38781' => 'cpa', 'Cpa.g.sc128.12' => 'cpa', 'Cpa.g.sc166.7' => 'cpa', 'Cpa.g.sc166.8' => 'cpa', 'Cpa.g.sc20.111' => 'cpa', 'Cpa.g.sc27.31' => 'cpa', 'Cpa.g.sc64.36' => 'cpa', 'Cpa.g.sc64.37' => 'cpa', 'Cpa.g.sc66.49' => 'cpa', 'Cpa.g.sc80.64' => 'cpa', 'CsaV3_1G012320' => 'csa', 'CsaV3_2G008480' => 'csa', 'CsaV3_2G033450' => 'csa', 'CsaV3_3G044830' => 'csa', 'CsaV3_4G033710' => 'csa', 'CsaV3_6G051730' => 'csa', 'CsaV3_7G025350' => 'csa', 'CSS0001067' => 'camsi', 'CSS0005996' => 'camsi', 'CSS0006590' => 'camsi', 'CSS0009673' => 'camsi', 'CSS0010201' => 'camsi', 'CSS0010549' => 'camsi', 'CSS0011364' => 'camsi', 'CSS0014473' => 'camsi', 'CSS0014961' => 'camsi', 'CSS0020191' => 'camsi', 'CSS0021165' => 'camsi', 'CSS0022306' => 'camsi', 'CSS0030591' => 'camsi', 'CSS0030696' => 'camsi', 'CSS0032653' => 'camsi', 'CSS0037487' => 'camsi', 'CSS0041102' => 'camsi', 'CSS0041261' => 'camsi', 'CSS0046246' => 'camsi', 'CSS0049256' => 'camsi', 'DCAR_004075' => 'dca', 'DCAR_011538' => 'dca', 'DCAR_019553' => 'dca', 'DCAR_020952' => 'dca', 'DCAR_021739' => 'dca', 'DCAR_027407' => 'dca', 'DCAR_027913' => 'dca', 'DCAR_028066' => 'dca', 'Dinv05899' => 'din', 'Dinv07563' => 'din', 'Dinv08010' => 'din', 'Dinv14125' => 'din', 'Dinv20172' => 'din', 'Dinv30743' => 'din', 'Dinv31229' => 'din', 'Dinv34162' => 'din', 'Dinv36028' => 'din', 'Dinv39368' => 'din', 'Dinv40565' => 'din', 'Dinv41706' => 'din', 'Duzib052G0089' => 'dzi', 'Duzib116G0641' => 'dzi', 'Duzib132G0069' => 'dzi', 'Duzib132G1219' => 'dzi', 'Duzib147G0278' => 'dzi', 'Duzib160G0480' => 'dzi', 'Duzib170G0661' => 'dzi', 'Duzib177G0591' => 'dzi', 'Duzib187G1353' => 'dzi', 'Duzib192G0858' => 'dzi', 'Duzib192G0883' => 'dzi', 'Duzib213G0506' => 'dzi', 'Duzib235G0289' => 'dzi', 'Duzib251G0422' => 'dzi', 'ECA232G3898' => 'eca', 'ECA233G5950' => 'eca', 'ECA234G1699' => 'eca', 'ECA234G2421' => 'eca', 'ECA236G0426' => 'eca', 'ECA236G4331' => 'eca', 'ECA248G2573' => 'eca', 'EL10Ac1g00077' => 'bvu', 'EL10Ac1g01746' => 'bvu', 'EL10Ac2g03464' => 'bvu', 'EL10Ac4g08176' => 'bvu', 'EL10Ac7g17521' => 'bvu', 'EL10Ac8g20386' => 'bvu', 'EL10Ac9g21343' => 'bvu', 'EL10Ac9g22688' => 'bvu', 'Eucgr.B03434' => 'egr', 'Eucgr.D00618' => 'egr', 'Eucgr.E02395' => 'egr', 'Eucgr.F01129' => 'egr', 'Eucgr.F02622' => 'egr', 'Eucgr.F04207' => 'egr', 'FAN01G0570' => 'fan', 'FAN03G3351' => 'fan', 'FAN06G3702' => 'fan', 'FAN07G2149' => 'fan', 'FAN10G3758' => 'fan', 'FAN11G1170' => 'fan', 'FAN11G2050' => 'fan', 'FAN11G2724' => 'fan', 'FAN12G1700' => 'fan', 'FAN12G2028' => 'fan', 'FAN15G1160' => 'fan', 'FAN15G3063' => 'fan', 'FAN16G2540' => 'fan', 'FAN16G3077' => 'fan', 'FAN16G3624' => 'fan', 'FAN17G0221' => 'fan', 'FAN20G2492' => 'fan', 'FAN20G2905' => 'fan', 'FAN21G0548' => 'fan', 'FAN21G1300' => 'fan', 'FAN22G0077' => 'fan', 'FAN22G1315' => 'fan', 'FAN24G1280' => 'fan', 'FAN24G1445' => 'fan', 'FAN24G3527' => 'fan', 'FAN25G0464' => 'fan', 'FAN25G2885' => 'fan', 'FAN25G3270' => 'fan', 'FAN27G1101' => 'fan', 'FAN27G2846' => 'fan', 'FAN27G3524' => 'fan', 'FvH4_2g11770' => 'fve', 'FvH4_2g15630' => 'fve', 'FvH4_3g05570' => 'fve', 'FvH4_3g09110' => 'fve', 'FvH4_3g19940' => 'fve', 'FvH4_4g04821' => 'fve', 'FvH4_4g31480' => 'fve', 'FvH4_7g01740' => 'fve', 'Glyma.05G130400' => 'gma', 'Glyma.05G156400' => 'gma', 'Glyma.07G197000' => 'gma', 'Glyma.08G085151' => 'gma', 'Glyma.08G114500' => 'gma', 'Glyma.08G300400' => 'gma', 'Glyma.10G215800' => 'gma', 'Glyma.12G224400' => 'gma', 'Glyma.13G179300' => 'gma', 'Glyma.13G218151' => 'gma', 'Glyma.13G238800' => 'gma', 'Glyma.13G276900' => 'gma', 'Glyma.14G078200' => 'gma', 'Glyma.15G074500' => 'gma', 'Glyma.15G094100' => 'gma', 'Glyma.17G247200' => 'gma', 'Glyma.18G120100' => 'gma', 'Glyma.20G176000' => 'gma', 'Gohir.A01G063600' => 'ghi', 'Gohir.A01G170301' => 'ghi', 'Gohir.A02G060500' => 'ghi', 'Gohir.A05G133850' => 'ghi', 'Gohir.A05G161400' => 'ghi', 'Gohir.A06G012900' => 'ghi', 'Gohir.A06G035901' => 'ghi', 'Gohir.A06G127100' => 'ghi', 'Gohir.A06G210500' => 'ghi', 'Gohir.A08G008650' => 'ghi', 'Gohir.A09G072700' => 'ghi', 'Gohir.A09G088301' => 'ghi', 'Gohir.A10G040600' => 'ghi', 'Gohir.A12G036300' => 'ghi', 'Gohir.A12G143350' => 'ghi', 'Gohir.A12G165500' => 'ghi', 'Gohir.A13G145700' => 'ghi', 'Gohir.D01G050000' => 'ghi', 'Gohir.D01G051366' => 'ghi', 'Gohir.D01G161350' => 'ghi', 'Gohir.D02G065900' => 'ghi', 'Gohir.D05G164200' => 'ghi', 'Gohir.D05G355500' => 'ghi', 'Gohir.D06G010400' => 'ghi', 'Gohir.D06G111250' => 'ghi', 'Gohir.D06G132000' => 'ghi', 'Gohir.D06G210500' => 'ghi', 'Gohir.D07G165675' => 'ghi', 'Gohir.D08G062240' => 'ghi', 'Gohir.D08G086101' => 'ghi', 'Gohir.D08G138060' => 'ghi', 'Gohir.D09G072300' => 'ghi', 'Gohir.D10G041400' => 'ghi', 'Gohir.D11G191020' => 'ghi', 'Gohir.D11G212066' => 'ghi', 'Gohir.D12G036300' => 'ghi', 'Gohir.D12G168600' => 'ghi', 'Gohir.D13G150600' => 'ghi', 'Gorai.001G057300' => 'gra', 'Gorai.002G069900' => 'gra', 'Gorai.002G200000' => 'gra', 'Gorai.003G067600' => 'gra', 'Gorai.005G074800' => 'gra', 'Gorai.006G087300' => 'gra', 'Gorai.008G037500' => 'gra', 'Gorai.008G181400' => 'gra', 'Gorai.009G169400' => 'gra', 'Gorai.009G387900' => 'gra', 'Gorai.010G013300' => 'gra', 'Gorai.010G153800' => 'gra', 'Gorai.010G255800' => 'gra', 'Gorai.011G043700' => 'gra', 'Gorai.011G198900' => 'gra', 'Gorai.013G168400' => 'gra', 'GSVIVG01005212001' => 'vvi', 'GSVIVG01006163001' => 'vvi', 'GSVIVG01009625001' => 'vvi', 'GSVIVG01014338001' => 'vvi', 'GSVIVG01020005001' => 'vvi', 'GSVIVG01021450001' => 'vvi', 'GSVIVG01023975001' => 'vvi', 'GSVIVG01034490001' => 'vvi', 'HanXRQChr04g0112071' => 'han', 'HanXRQChr05g0131151' => 'han', 'HanXRQChr09g0262371' => 'han', 'HanXRQChr09g0268401' => 'han', 'HanXRQChr10g0279241' => 'han', 'HanXRQChr10g0297961' => 'han', 'HanXRQChr11g0326231' => 'han', 'HanXRQChr11g0328471' => 'han', 'HanXRQChr16g0507941' => 'han', 'HanXRQChr17g0560211' => 'han', 'Haze_02108' => 'cav', 'Haze_02428' => 'cav', 'Haze_05593' => 'cav', 'Haze_06448' => 'cav', 'Haze_09427' => 'cav', 'Haze_12022' => 'cav', 'Haze_17612' => 'cav', 'Haze_17928' => 'cav', 'Hma1.2p1_0032F.1_g019250' => 'hma', 'Hma1.2p1_0163F.1_g072690' => 'hma', 'Hma1.2p1_0265F.1_g106710' => 'hma', 'Hma1.2p1_0286F.1_g113970' => 'hma', 'Hma1.2p1_0363F.1_g136640' => 'hma', 'Hma1.2p1_0584F.1_g183470' => 'hma', 'Hma1.2p1_0885F.1_g232570' => 'hma', 'HPP92_006022' => 'vpl', 'HPP92_007320' => 'vpl', 'HPP92_011521' => 'vpl', 'HPP92_019387' => 'vpl', 'HPP92_024038' => 'vpl', 'Hund05891' => 'sun', 'Hund06450' => 'sun', 'Hund12053' => 'sun', 'Hund16800' => 'sun', 'Hund21222' => 'sun', 'Hund22896' => 'sun', 'Hund23746' => 'sun', 'Hund27083' => 'sun', 'Lalb_Chr02g0141831' => 'lal', 'Lalb_Chr02g0141841' => 'lal', 'Lalb_Chr05g0220411' => 'lal', 'Lalb_Chr06g0162081' => 'lal', 'Lalb_Chr09g0327651' => 'lal', 'Lalb_Chr13g0295051' => 'lal', 'Lalb_Chr15g0086801' => 'lal', 'Lalb_Chr16g0383781' => 'lal', 'Lalb_Chr16g0383791' => 'lal', 'Lalb_Chr18g0055441' => 'lal', 'Lalb_Chr18g0059611' => 'lal', 'Lalb_Chr20g0109661' => 'lal', 'Lalb_Chr20g0109831' => 'lal', 'Lalb_Chr20g0121871' => 'lal', 'Lalb_Chr22g0355361' => 'lal', 'Lalb_Chr25g0286371' => 'lal', 'Lj1A1187G43' => 'lonja', 'Lj1A1205T50' => 'lonja', 'Lj1A800G33' => 'lonja', 'Lj1C1187T7' => 'lonja', 'Lj1C843T11' => 'lonja', 'Lj1g0010940' => 'lja', 'Lj2A288T69' => 'lonja', 'Lj3g0024276' => 'lja', 'Lj4A47T76' => 'lonja', 'Lj4g0005805' => 'lja', 'Lj4g0006097' => 'lja', 'Lj4g0008528' => 'lja', 'Lj4g0024907' => 'lja', 'Lj5g0012472' => 'lja', 'Lj5g0018648' => 'lja', 'Lj6C789G1' => 'lonja', 'Lj6g0004000' => 'lja', 'Lj7A292G67' => 'lonja', 'Lj7A292T64' => 'lonja', 'Lj9A400T58' => 'lonja', 'Lsat_1_v5_gn_1_126181' => 'lsa', 'Lsat_1_v5_gn_4_123041' => 'lsa', 'Lsat_1_v5_gn_4_133620' => 'lsa', 'Lsat_1_v5_gn_4_53221' => 'lsa', 'Lsat_1_v5_gn_4_71961' => 'lsa', 'Lsat_1_v5_gn_7_105241' => 'lsa', 'Lsat_1_v5_gn_7_21361' => 'lsa', 'Lsat_1_v5_gn_7_28860' => 'lsa', 'Lsat_1_v5_gn_7_31260' => 'lsa', 'Lsat_1_v5_gn_8_52801' => 'lsa', 'Manes.02G191400' => 'mes', 'Manes.03G110100' => 'mes', 'Manes.04G071100' => 'mes', 'Manes.05G100500' => 'mes', 'Manes.05G164700' => 'mes', 'Manes.15G087000' => 'mes', 'Manes.15G121500' => 'mes', 'Manes.16G028300' => 'mes', 'Manes.17G046100' => 'mes', 'Manes.17G069800' => 'mes', 'Manes.18G100500' => 'mes', 'Mapoly0002s0109' => 'mpo', 'Mapoly0024s0007' => 'mpo', 'Mapoly0089s0032' => 'mpo', 'MBI04_g42241_MAGBIO' => 'mbi', 'MBI05_g11988_MAGBIO' => 'mbi', 'MBI05_g35452_MAGBIO' => 'mbi', 'MBI07_g30179_MAGBIO' => 'mbi', 'MBI07_g35859_MAGBIO' => 'mbi', 'MBI07_g35860_MAGBIO' => 'mbi', 'MBI07_g37166_MAGBIO' => 'mbi', 'MBI08_g18172_MAGBIO' => 'mbi', 'MBI09_g08441_MAGBIO' => 'mbi', 'MBI13_g01676_MAGBIO' => 'mbi', 'MBI14_g42955_MAGBIO' => 'mbi', 'MBI16_g13161_MAGBIO' => 'mbi', 'MBI17_g27204_MAGBIO' => 'mbi', 'MBI19_g21595_MAGBIO' => 'mbi', 'MD00G1148400' => 'mdo', 'MD02G1301200' => 'mdo', 'MD03G1227800' => 'mdo', 'MD05G1041100' => 'mdo', 'MD05G1124800' => 'mdo', 'MD05G1284000' => 'mdo', 'MD05G1338800' => 'mdo', 'MD05G1338900' => 'mdo', 'MD07G1022800' => 'mdo', 'MD10G1047500' => 'mdo', 'MD10G1127500' => 'mdo', 'MD10G1262300' => 'mdo', 'MD10G1293800' => 'mdo', 'MD16G1074300' => 'mdo', 'Medtr1g021670' => 'mtr', 'Medtr1g096320' => 'mtr', 'Medtr2g013690' => 'mtr', 'Medtr2g019450' => 'mtr', 'Medtr2g085170' => 'mtr', 'Medtr4g088785' => 'mtr', 'Medtr8g055930' => 'mtr', 'Medtr8g085850' => 'mtr', 'MELO3C002605.2' => 'cme', 'MELO3C003891.2' => 'cme', 'MELO3C004012.2' => 'cme', 'MELO3C007134.2' => 'cme', 'MELO3C008118.2' => 'cme', 'MELO3C016700.2' => 'cme', 'MELO3C024127.2' => 'cme', 'MELO3C033361.2' => 'cme', 'MELO3C033362.2' => 'cme', 'Migut.C00430' => 'egut', 'Migut.C01246' => 'egut', 'Migut.E00101' => 'egut', 'Migut.H01486' => 'egut', 'Migut.H01939' => 'egut', 'Migut.K00360' => 'egut', 'Migut.M00910' => 'egut', 'Migut.M01139' => 'egut', 'Migut.N02677' => 'egut', 'MSTRG.13252' => 'ama', 'MSTRG.14701' => 'ama', 'MSTRG.1521' => 'ama', 'MSTRG.15884' => 'ama', 'MSTRG.16242' => 'ama', 'MSTRG.22285' => 'ama', 'MSTRG.22444' => 'ama', 'MSTRG.2349' => 'ama', 'MSTRG.26308' => 'ama', 'MSTRG.28296' => 'ama', 'MSTRG.9895' => 'ama', 'Nitab4.5_0000110g0060' => 'nta', 'Nitab4.5_0000420g0130' => 'nta', 'Nitab4.5_0000422g0030' => 'nta', 'Nitab4.5_0000560g0180' => 'nta', 'Nitab4.5_0000703g0100' => 'nta', 'Nitab4.5_0000786g0200' => 'nta', 'Nitab4.5_0001336g0020' => 'nta', 'Nitab4.5_0001796g0030' => 'nta', 'Nitab4.5_0003348g0060' => 'nta', 'Nitab4.5_0003698g0040' => 'nta', 'Nitab4.5_0003942g0090' => 'nta', 'Nitab4.5_0004775g0070' => 'nta', 'Nitab4.5_0004864g0030' => 'nta', 'Nitab4.5_0005615g0020' => 'nta', 'Nitab4.5_0009288g0030' => 'nta', 'Nitab4.5_0009341g0010' => 'nta', 'Nitab4.5_0009535g0010' => 'nta', 'Nn1g03995' => 'nnu', 'Nn1g04100' => 'nnu', 'Nn1g06530' => 'nnu', 'Nn3g16404' => 'nnu', 'Nn3g17212' => 'nnu', 'Nn3g20776' => 'nnu', 'Nn3g21923' => 'nnu', 'Nn5g27737' => 'nnu', 'Nn5g29461' => 'nnu', 'Nn7g38355' => 'nnu', 'Nn8g39873' => 'nnu', 'Oeu000548.2' => 'oeu', 'Oeu004672.1' => 'oeu', 'Oeu015605.2' => 'oeu', 'Oeu016092.1' => 'oeu', 'Oeu017879.3' => 'oeu', 'Oeu024910.1' => 'oeu', 'Oeu028965.1' => 'oeu', 'Oeu031269.1' => 'oeu', 'Oeu031270.1' => 'oeu', 'Oeu032535.1' => 'oeu', 'Oeu034151.1' => 'oeu', 'Oeu034152.1' => 'oeu', 'Oeu034588.2' => 'oeu', 'Oeu050846.1' => 'oeu', 'Oeu050849.2' => 'oeu', 'Oeu051063.2' => 'oeu', 'Oeu052368.1' => 'oeu', 'Oeu052370.1' => 'oeu', 'Os01g0210400' => 'osa', 'Os01g0304300' => 'osa', 'Os01g0749100' => 'osa', 'Os02g0745800' => 'osa', 'Os03g0769050' => 'osa', 'Os05g0531500' => 'osa', 'Os06g0724300' => 'osa', 'Os11g0198100' => 'osa', 'Peaxi162Scf00069g01425' => 'pax', 'Peaxi162Scf00280g00811' => 'pax', 'Peaxi162Scf00310g00615' => 'pax', 'Peaxi162Scf00362g00542' => 'pax', 'Peaxi162Scf00461g00310' => 'pax', 'Peaxi162Scf00530g00118' => 'pax', 'Peaxi162Scf00541g00057' => 'pax', 'Peaxi162Scf00661g00017' => 'pax', 'Peaxi162Scf00926g00027' => 'pax', 'Peaxi162Scf01064g00263' => 'pax', 'Peaxi162Scf01211g00135' => 'pax', 'PGR004G2336' => 'pgr', 'PGR042G0327' => 'pgr', 'PGR042G1957' => 'pgr', 'PGR042G2003' => 'pgr', 'PGR042G3929' => 'pgr', 'PGR083G1137' => 'pgr', 'PGR083G1364' => 'pgr', 'PGSC0003DMG400003381' => 'stu', 'PGSC0003DMG400003417' => 'stu', 'PGSC0003DMG400008981' => 'stu', 'PGSC0003DMG400012417' => 'stu', 'PGSC0003DMG400012823' => 'stu', 'PGSC0003DMG400016885' => 'stu', 'PGSC0003DMG400022812' => 'stu', 'PGSC0003DMG400029726' => 'stu', 'PGSC0003DMG401009243' => 'stu', 'PGSC0003DMG401031505' => 'stu', 'PGSC0003DMG402031505' => 'stu', 'Phvul.001G017600' => 'pvu', 'Phvul.002G193500' => 'pvu', 'Phvul.002G228900' => 'pvu', 'Phvul.002G236800' => 'pvu', 'Phvul.003G049500' => 'pvu', 'Phvul.005G072000' => 'pvu', 'Phvul.006G164800' => 'pvu', 'Phvul.006G185100' => 'pvu', 'Phvul.007G090000' => 'pvu', 'Potri.001G399800' => 'ptr', 'Potri.002G149900' => 'ptr', 'Potri.004G044100' => 'ptr', 'Potri.004G177600' => 'ptr', 'Potri.009G138000' => 'ptr', 'Potri.010G094000' => 'ptr', 'Potri.011G053000' => 'ptr', 'Potri.011G119300' => 'ptr', 'Potri.013G113700' => 'ptr', 'Potri.018G107800' => 'ptr', 'Potri.019G084100' => 'ptr', 'Pp3c14_23720' => 'ppa', 'Pp3c16_6340' => 'ppa', 'Pp3c23_13420' => 'ppa', 'Pp3c24_2740' => 'ppa', 'Pp3c25_860' => 'ppa', 'Pp3c8_21750' => 'ppa', 'Prupe.1G273000' => 'ppe', 'Prupe.1G273700' => 'ppe', 'Prupe.1G274100' => 'ppe', 'Prupe.2G023300' => 'ppe', 'Prupe.4G048000' => 'ppe', 'Prupe.4G080400' => 'ppe', 'Prupe.4G181200' => 'ppe', 'Prupe.8G056900' => 'ppe', 'Prupe.8G168700' => 'ppe', 'Psat1g189080' => 'psa', 'Psat1g204760' => 'psa', 'Psat4g175560' => 'psa', 'Psat4g177720' => 'psa', 'Psat5g244240' => 'psa', 'Psat6g010720' => 'psa', 'Psat6g187200' => 'psa', 'Psat7g072040' => 'psa', 'PSO017G3501' => 'pso', 'PSO063G2148' => 'pso', 'PSO063G5608' => 'pso', 'PSO210G6392' => 'pso', 'PSO541G2319' => 'pso', 'PSO541G2836' => 'pso', 'PSO541G4012' => 'pso', 'PSO541G6253' => 'pso', 'PSO675G0580' => 'pso', 'PSO675G0856' => 'pso', 'PSO675G5635' => 'pso', 'PSO675G9157' => 'pso', 'PSO832G1660' => 'pso', 'PSO832G1969' => 'pso', 'QL02p007186' => 'qlo', 'QL02p033904' => 'qlo', 'QL03p064391' => 'qlo', 'QL05p040593' => 'qlo', 'QL05p058242' => 'qlo', 'QL08p021825' => 'qlo', 'QL11p004981' => 'qlo', 'RcHm_v2.0_Chr1g0318301' => 'rch', 'RcHm_v2.0_Chr4g0418501' => 'rch', 'RcHm_v2.0_Chr4g0439971' => 'rch', 'RcHm_v2.0_Chr5g0008541' => 'rch', 'RcHm_v2.0_Chr5g0014101' => 'rch', 'RcHm_v2.0_Chr5g0014131' => 'rch', 'RcHm_v2.0_Chr5g0033621' => 'rch', 'RcHm_v2.0_Chr6g0272041' => 'rch', 'RcHm_v2.0_Chr6g0278831' => 'rch', 'Rhsim02G0130400' => 'rsi', 'Rhsim02G0171100' => 'rsi', 'Rhsim05G0053000' => 'rsi', 'Rhsim05G0053100' => 'rsi', 'Rhsim06G0096500' => 'rsi', 'Rhsim06G0096600' => 'rsi', 'Rhsim06G0199100' => 'rsi', 'Rhsim12G0062300' => 'rsi', 'Rhsim12G0062800' => 'rsi', 'Sabra02G0118600' => 'sbr', 'Sabra04G0027300' => 'sbr', 'Sabra04G0119500' => 'sbr', 'Sabra08G0112500' => 'sbr', 'Sabra11G0036800' => 'sbr', 'Sabra11G0103800' => 'sbr', 'Sabra13G0096300' => 'sbr', 'Sabra16G0262300' => 'sbr', 'Sabra18G0091700' => 'sbr', 'Sabra19G0095400' => 'sbr', 'SalBow6G3080' => 'sbo', 'SalBow7G1157' => 'sbo', 'SalBow7G2123' => 'sbo', 'SalBow7G2285' => 'sbo', 'SalBow7G3537' => 'sbo', 'SalBow8G2947' => 'sbo', 'SalBow8G4463' => 'sbo', 'SalBow8G5466' => 'sbo', 'Sc01g0001750' => 'sci', 'Sc02g0006640' => 'sci', 'Sc02g0006670' => 'sci', 'Sc04g0008220' => 'sci', 'Sc05g0006190' => 'sci', 'Sc08g0002760' => 'sci', 'Sc17g0006170' => 'sci', 'Sc22g0002050' => 'sci', 'Sc23g0001190' => 'sci', 'Sc24g0000980' => 'sci', 'Sed0006245' => 'sed', 'Sed0007543' => 'sed', 'Sed0009411' => 'sed', 'Sed0010765' => 'sed', 'Sed0012944' => 'sed', 'Sed0014682' => 'sed', 'Sed0016174' => 'sed', 'Sed0016796' => 'sed', 'Sed0020317' => 'sed', 'Sed0021467' => 'sed', 'SEGI_01316' => 'sgi', 'SEGI_03374' => 'sgi', 'SEGI_16265' => 'sgi', 'SEGI_18569' => 'sgi', 'SEGI_20351' => 'sgi', 'SEGI_26395' => 'sgi', 'SEGI_29469' => 'sgi', 'SEGI_34771' => 'sgi', 'SEGI_36769' => 'sgi', 'SEGI_37139' => 'sgi', 'SGA_v2.0_scaffold100G29687' => 'sas', 'SGA_v2.0_scaffold118G32472' => 'sas', 'SGA_v2.0_scaffold14G07051' => 'sas', 'SGA_v2.0_scaffold183G39845' => 'sas', 'SGA_v2.0_scaffold1G00174' => 'sas', 'SGA_v2.0_scaffold22G09714' => 'sas', 'SGA_v2.0_scaffold333G48992' => 'sas', 'SGA_v2.0_scaffold46G17491' => 'sas', 'SGA_v2.0_scaffold49G18294' => 'sas', 'SGA_v2.0_scaffold63G21658' => 'sas', 'SHI01741' => 'shi', 'SHI05771' => 'shi', 'SHI18077' => 'shi', 'SHI20525' => 'shi', 'SHI20527' => 'shi', 'SHI20528' => 'shi', 'SMO172G0185' => 'smo', 'SMO198G0020' => 'smo', 'SMO351G0006' => 'smo', 'SMO356G0118' => 'smo', 'SMO358G0296' => 'smo', 'SMO367G0079' => 'smo', 'SMO367G1277' => 'smo', 'Solyc01g014220.3' => 'sly', 'Solyc01g111770.2' => 'sly', 'Solyc02g078180.3' => 'sly', 'Solyc03g006430.3' => 'sly', 'Solyc03g006456.1' => 'sly', 'Solyc03g079860.2' => 'sly', 'Solyc04g079770.3' => 'sly', 'Solyc05g007430.4' => 'sly', 'Solyc07g063150.3' => 'sly', 'Solyc08g016620.3' => 'sly', 'Solyc09g057590.3' => 'sly', 'Solyc09g057600.1' => 'sly', 'Solyc10g009050.3' => 'sly', 'Solyc11g017420.2' => 'sly', 'Sopen01g053810' => 'spe', 'Sopen02g023040' => 'spe', 'Sopen03g002440' => 'spe', 'Sopen04g033350' => 'spe', 'Sopen05g003310' => 'spe', 'Sopen07g004050' => 'spe', 'Sopen07g031340' => 'spe', 'Sopen08g006990' => 'spe', 'Sopen10g004830' => 'spe', 'Sopen11g009370' => 'spe', 'Sp1g24450' => 'spa', 'Sp1g29670' => 'spa', 'Sp1g39600' => 'spa', 'Sp2g11080' => 'spa', 'Sp2g13970' => 'spa', 'Sp4g16130' => 'spa', 'Sp6g13080' => 'spa', 'Sp7g37270' => 'spa', 'TAR371G0065' => 'tar', 'TAR376G0340' => 'tar', 'TAR376G0435' => 'tar', 'TAR381G0002' => 'tar', 'TAR381G1236' => 'tar', 'TAR624G0055' => 'tar', 'TAR624G0324' => 'tar', 'TAR624G0696' => 'tar', 'TAR624G0906' => 'tar', 'TAR625G0107' => 'tar', 'TAR626G0015' => 'tar', 'TAR626G1356' => 'tar', 'TAR627G0888' => 'tar', 'TAR628G0399' => 'tar', 'TAR628G1327' => 'tar', 'TAR629G2831' => 'tar', 'TAR629G2874' => 'tar', 'TAR633G1432' => 'tar', 'TAR633G2771' => 'tar', 'THA.LOC104803394' => 'tha', 'THA.LOC104805153' => 'tha', 'THA.LOC104806784' => 'tha', 'THA.LOC104810473' => 'tha', 'THA.LOC104813100' => 'tha', 'THA.LOC104814215' => 'tha', 'THA.LOC104815554' => 'tha', 'THA.LOC104820544' => 'tha', 'THA.LOC104824754' => 'tha', 'THA.LOC104827717' => 'tha', 'Thecc.02G031400' => 'tca', 'Thecc.02G055900' => 'tca', 'Thecc.02G350800' => 'tca', 'Thecc.06G150900' => 'tca', 'Thecc.06G186600' => 'tca', 'Thecc.07G089600' => 'tca', 'Thecc.08G020400' => 'tca', 'Thecc.08G182100' => 'tca', 'Thhalv10000873m.g' => 'esa', 'Thhalv10004185m.g' => 'esa', 'Thhalv10006981m.g' => 'esa', 'Thhalv10007204m.g' => 'esa', 'Thhalv10011374m.g' => 'esa', 'Thhalv10013482m.g' => 'esa', 'Thhalv10017801m.g' => 'esa', 'Thhalv10024983m.g' => 'esa', 'TPR.G12072' => 'tpr', 'TPR.G15769' => 'tpr', 'TPR.G16504' => 'tpr', 'TPR.G16506' => 'tpr', 'TPR.G24345' => 'tpr', 'TPR.G26666' => 'tpr', 'TPR.G27320' => 'tpr', 'TPR.G31819' => 'tpr', 'TPR.G38879' => 'tpr', 'TPR.G39015' => 'tpr', 'TPR.G8819' => 'tpr', 'TWI09G0924' => 'twi', 'TWI12G0811' => 'twi', 'TWI12G1294' => 'twi', 'TWI31G0150' => 'twi', 'TWI36G1262' => 'twi', 'TWI38G1287' => 'twi', 'TWI38G1633' => 'twi', 'TWI38G1982' => 'twi', 'TWI39G0116' => 'twi', 'TWI60G1011' => 'twi', 'TWI63G0171' => 'twi', 'TWI73G0839' => 'twi', 'TWI79G1511' => 'twi', 'unitig_0.g915' => 'ugi', 'unitig_0.g916' => 'ugi', 'unitig_21.g20219' => 'ugi', 'unitig_21.g20416' => 'ugi', 'unitig_578.g16132' => 'ugi', 'unitig_578.g16718' => 'ugi', 'unitig_62.g23481' => 'ugi', 'unitig_744.g24535' => 'ugi', 'unitig_749.g13525' => 'ugi', 'vmacro01248' => 'vma', 'vmacro02290' => 'vma', 'vmacro10946' => 'vma', 'vmacro11865' => 'vma', 'vmacro12493' => 'vma', 'vmacro17322' => 'vma', 'vmacro21599' => 'vma', 'vmacro23041' => 'vma', 'VMungo0251G0004' => 'vmu', 'VMungo0251G2639' => 'vmu', 'VMungo0251G2967' => 'vmu', 'VMungo0540G0864' => 'vmu', 'VMungo0540G1569' => 'vmu', 'VMungo0647G0317' => 'vmu', 'VMungo0720G1373' => 'vmu', 'VMungo0720G1508' => 'vmu', 'VMungo1080G0485' => 'vmu', 'VMungo1215G3177' => 'vmu', 'Zm00001eb112600' => 'zma', 'Zm00001eb120220' => 'zma', 'Zm00001eb153240' => 'zma', 'Zm00001eb168880' => 'zma', 'Zm00001eb213920' => 'zma', 'Zm00001eb228280' => 'zma', 'Zm00001eb254580' => 'zma', 'Zm00001eb272180' => 'zma', 'Zm00001eb293190' => 'zma', 'Zm00001eb322930' => 'zma', 'Zm00001eb353360' => 'zma', 'Zm00001eb353390' => 'zma', 'Zm00001eb353430' => 'zma', 'Zm00001eb353440' => 'zma', 'Zm00001eb353780' => 'zma' ) $gf_id = 'HOM05D000499' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000499' ) $data_identifier = 'HOM05D000499' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 29, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 12, 'amhyb' => (int) 8, 'aly' => (int) 12, 'aox' => (int) 9, 'arhy' => (int) 26, 'ath' => (int) 8, 'atr' => (int) 7, 'acertr' => (int) 10, 'cqu' => (int) 15, 'bca' => (int) 29, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 11, 'cansat' => (int) 8, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 9, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 8, 'cpa' => (int) 10, 'csa' => (int) 7, 'camsi' => (int) 20, 'dca' => (int) 8, 'din' => (int) 12, 'dzi' => (int) 14, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 6, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 38, 'gra' => (int) 16, 'vvi' => (int) 8, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 5, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 11, 'lja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 11, 'mpo' => (int) 3, 'mbi' => (int) 14, 'mdo' => (int) 14, 'mtr' => (int) 8, 'cme' => (int) 9, 'egut' => (int) 9, 'ama' => (int) 11, 'nta' => (int) 17, 'nnu' => (int) 11, 'oeu' => (int) 18, 'osa' => (int) 8, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 6, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 9, 'rsi' => (int) 9, 'sbr' => (int) 10, 'sbo' => (int) 8, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 10, 'sas' => (int) 10, 'shi' => (int) 6, 'smo' => (int) 7, 'sly' => (int) 14, 'spe' => (int) 10, 'spa' => (int) 8, 'tar' => (int) 19, 'tha' => (int) 10, 'tca' => (int) 8, 'esa' => (int) 8, 'tpr' => (int) 11, 'twi' => (int) 13, 'ugi' => (int) 9, 'vma' => (int) 8, 'vmu' => (int) 10, 'zma' => (int) 15 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb353780' $species_info = array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ) $local_species = 'lsa' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000499', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1066', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p29780' => 'bna', 'A02p33180' => 'bna', 'A03p16470' => 'bna', 'A03p66010' => 'bna', 'A04p25970' => 'bna', 'A06p01270' => 'bna', 'A06p46080' => 'bna', 'A07p11400' => 'bna', 'A08p01840' => 'bna', 'A08p08230' => 'bna', 'A08p25740' => 'bna', 'A09p32070' => 'bna', 'A09p37830' => 'bna', 'A09p42840' => 'bna', 'A09p42850' => 'bna', 'Aa31LG10G2060' => 'aar', 'Aa31LG2G7410' => 'aar', 'Aa31LG6G10200' => 'aar', 'Aa31LG6G16680' => 'aar', 'Aa31LG6G8470' => 'aar', 'Aa31LG9G12730' => 'aar', 'Aa31LG9G13680' => 'aar', 'Aa31LG9G14920' => 'aar', 'Aa31LG9G6650' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4977' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5467' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3254' => 'aag', 'Actinidia02578' => 'ach', 'Actinidia07693' => 'ach', 'Actinidia08413' => 'ach', 'Actinidia08414' => 'ach', 'Actinidia15289' => 'ach', 'Actinidia19871' => 'ach', 'Actinidia21475' => 'ach', 'Actinidia22576' => 'ach', 'Actinidia28327' => 'ach', 'Actinidia32491' => 'ach', 'Actinidia39463' => 'ach', 'Actinidia39571' => 'ach', 'Ah.01g013750' => 'amhyb', 'Ah.01g023210' => 'amhyb', 'Ah.04g164850' => 'amhyb', 'Ah.05g178060' => 'amhyb', 'Ah.07g204270' => 'amhyb', 'Ah.07g208480' => 'amhyb', 'Ah.09g237410' => 'amhyb', 'Ah.14g089460' => 'amhyb', 'AL1G41790' => 'aly', 'AL1G49050' => 'aly', 'AL1G53810' => 'aly', 'AL1G61400' => 'aly', 'AL4G18580' => 'aly', 'AL5G12510' => 'aly', 'AL5G12540' => 'aly', 'AL6G43230' => 'aly', 'AL7G10370' => 'aly', 'AL7G19250' => 'aly', 'AL8G12240' => 'aly', 'AL8G18540' => 'aly', 'Aqoxy1G02409' => 'aox', 'Aqoxy2G03993' => 'aox', 'Aqoxy3G03357' => 'aox', 'Aqoxy4G00785' => 'aox', 'Aqoxy5G02598' => 'aox', 'Aqoxy6G00132' => 'aox', 'Aqoxy7G01776' => 'aox', 'Aqoxy7G02316' => 'aox', 'Aqoxy7G03973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.12AFKW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B8730' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27IQR1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3F75VG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3RE0GA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41TCQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.527VTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FIR39' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5W8UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DA38EV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ63HS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H1I32C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HC27T5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4M8AP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7N3CZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9UVDZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LS1NQA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT1D4B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SKC4TM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCFV76' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF9Q1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQWD9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1ZM88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WE07RT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YCK7VH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJE6Q6' => 'arhy', 'AT1G28240' => 'ath', 'AT1G34550' => 'ath', 'AT1G53040' => 'ath', 'AT2G02910' => 'ath', 'AT4G09630' => 'ath', 'AT4G38500' => 'ath', 'AT5G42660' => 'ath', 'AT5G46220' => 'ath', 'ATR0152G026' => 'atr', 'ATR0564G343' => 'atr', 'ATR0706G151' => 'atr', 'ATR0733G207' => 'atr', 'ATR0751G234' => 'atr', 'ATR0807G048' => 'atr', 'ATR1091G084' => 'atr', 'Atru.chr10.1229' => 'acertr', 'Atru.chr10.1230' => 'acertr', 'Atru.chr10.1874' => 'acertr', 'Atru.chr11.1808' => 'acertr', 'Atru.chr13.1795' => 'acertr', 'Atru.chr13.570' => 'acertr', 'Atru.chr2.2608' => 'acertr', 'Atru.chr2.2609' => 'acertr', 'Atru.chr5.3428' => 'acertr', 'Atru.chr8.1171' => 'acertr', 'AUR62004651' => 'cqu', 'AUR62008675' => 'cqu', 'AUR62010014' => 'cqu', 'AUR62013004' => 'cqu', 'AUR62014825' => 'cqu', 'AUR62015015' => 'cqu', 'AUR62015151' => 'cqu', 'AUR62017020' => 'cqu', 'AUR62019422' => 'cqu', 'AUR62023570' => 'cqu', 'AUR62025571' => 'cqu', 'AUR62029098' => 'cqu', 'AUR62033863' => 'cqu', 'AUR62034296' => 'cqu', 'AUR62040075' => 'cqu', 'BcaB02g07334' => 'bca', 'BcaB02g10575' => 'bca', 'BcaB03g12119' => 'bca', 'BcaB03g12120' => 'bca', 'BcaB03g13945' => 'bca', 'BcaB04g17123' => 'bca', 'BcaB04g17867' => 'bca', 'BcaB04g19839' => 'bca', 'BcaB07g30317' => 'bca', 'BcaB07g32432' => 'bca', 'BcaB07g33362' => 'bca', 'BcaB08g36611' => 'bca', 'BcaC01g00028' => 'bca', 'BcaC01g01356' => 'bca', 'BcaC01g02034' => 'bca', 'BcaC01g06051' => 'bca', 'BcaC03g16839' => 'bca', 'BcaC03g17176' => 'bca', 'BcaC05g26829' => 'bca', 'BcaC06g31490' => 'bca', 'BcaC06g35344' => 'bca', 'BcaC06g36570' => 'bca', 'BcaC07g37537' => 'bca', 'BcaC08g43491' => 'bca', 'BcaC08g43773' => 'bca', 'BcaNung00234' => 'bca', 'BcaNung01982' => 'bca', 'BcaNung03707' => 'bca', 'BcaNung06454' => 'bca', 'BolC2t10762H' => 'bol', 'BolC2t11191H' => 'bol', 'BolC3t14322H' => 'bol', 'BolC3t19747H' => 'bol', 'BolC3t21425H' => 'bol', 'BolC4t27800H' => 'bol', 'BolC5t31423H' => 'bol', 'BolC6t35951H' => 'bol', 'BolC6t36282H' => 'bol', 'BolC7t40678H' => 'bol', 'BolC7t40679H' => 'bol', 'BolC7t42222H' => 'bol', 'BolC7t43492H' => 'bol', 'BolC7t46785H' => 'bol', 'BolC8t47853H' => 'bol', 'BolC9t56805H' => 'bol', 'BraA02t08000Z' => 'bra', 'BraA02t08341Z' => 'bra', 'BraA03t10936Z' => 'bra', 'BraA03t15657Z' => 'bra', 'BraA04t18100Z' => 'bra', 'BraA05t20523Z' => 'bra', 'BraA06t23353Z' => 'bra', 'BraA06t27473Z' => 'bra', 'BraA06t27769Z' => 'bra', 'BraA07t28928Z' => 'bra', 'BraA08t32236Z' => 'bra', 'BraA08t32841Z' => 'bra', 'BraA08t34524Z' => 'bra', 'BraA09t38742Z' => 'bra', 'BraA09t39295Z' => 'bra', 'C02p47180' => 'bna', 'C02p50990' => 'bna', 'C03p19360' => 'bna', 'C03p74950' => 'bna', 'C03p91000' => 'bna', 'C04p63260' => 'bna', 'C05p27050' => 'bna', 'C06p08750' => 'bna', 'C06p11490' => 'bna', 'C07p02820' => 'bna', 'C07p17180' => 'bna', 'C07p29440' => 'bna', 'C07p63730' => 'bna', 'C09p39260' => 'bna', 'CAN.G1164.34' => 'can', 'CAN.G1164.39' => 'can', 'CAN.G1530.3' => 'can', 'CAN.G162.61' => 'can', 'CAN.G176.6' => 'can', 'CAN.G289.49' => 'can', 'CAN.G370.21' => 'can', 'CAN.G370.22' => 'can', 'CAN.G371.117' => 'can', 'CAN.G58.37' => 'can', 'CAN.G588.98' => 'can', 'CANSAT21G2266' => 'cansat', 'CANSAT25G2799' => 'cansat', 'CANSAT35G0862' => 'cansat', 'CANSAT35G1704' => 'cansat', 'CANSAT35G1760' => 'cansat', 'CANSAT56G3971' => 'cansat', 'CANSAT56G4116' => 'cansat', 'CANSAT80G1259' => 'cansat', 'CARHR027730' => 'chi', 'CARHR033880' => 'chi', 'CARHR043270' => 'chi', 'CARHR145330' => 'chi', 'CARHR145340' => 'chi', 'CARHR175570' => 'chi', 'CARHR181570' => 'chi', 'CARHR258470' => 'chi', 'CARHR260490' => 'chi', 'CARHR294220' => 'chi', 'Carub.0001s2668' => 'cru', 'Carub.0001s3257' => 'cru', 'Carub.0001s4220' => 'cru', 'Carub.0005s0179' => 'cru', 'Carub.0006s2807' => 'cru', 'Carub.0007s0039' => 'cru', 'Carub.0008s0169' => 'cru', 'Carub.0008s0636' => 'cru', 'Ca_00338_v3' => 'car', 'Ca_00542_v3' => 'car', 'Ca_01844_v3' => 'car', 'Ca_10611_v3' => 'car', 'Ca_13326_v3' => 'car', 'Ca_17944_v3' => 'car', 'Ca_18546_v3' => 'car', 'Ca_24219_v3' => 'car', 'Ca_29972_v3' => 'car', 'CBR_g3681' => 'cbr', 'CBR_g40021' => 'cbr', 'Cc01_g08140' => 'ccan', 'Cc02_g13410' => 'ccan', 'Cc02_g37480' => 'ccan', 'Cc05_g12030' => 'ccan', 'Cc09_g03370' => 'ccan', 'Cc09_g10300' => 'ccan', 'Cc10_g03530' => 'ccan', 'Cc10_g11380' => 'ccan', 'CDE01G0176' => 'cde', 'CDE02G0675' => 'cde', 'CDE02G0942' => 'cde', 'CDE02G1153' => 'cde', 'CDE02G4177' => 'cde', 'CDE04G2117' => 'cde', 'CDE04G2736' => 'cde', 'CDE08G1161' => 'cde', 'CDE09G1238' => 'cde', 'Cfa000467' => 'cfa', 'Cfa000947' => 'cfa', 'Cfa004969' => 'cfa', 'Cfa005284' => 'cfa', 'Cfa008993' => 'cfa', 'Cfa018187' => 'cfa', 'Cfa018454' => 'cfa', 'Cfa020585' => 'cfa', 'Ciclev10000424m.g' => 'ccl', 'Ciclev10003605m.g' => 'ccl', 'Ciclev10007828m.g' => 'ccl', 'Ciclev10014620m.g' => 'ccl', 'Ciclev10015169m.g' => 'ccl', 'Ciclev10018291m.g' => 'ccl', 'Ciclev10028256m.g' => 'ccl', 'Ciclev10033822m.g' => 'ccl', 'CiPaw.05G060300' => 'cil', 'CiPaw.05G085000' => 'cil', 'CiPaw.06G083700' => 'cil', 'CiPaw.06G120300' => 'cil', 'CiPaw.09G060500' => 'cil', 'CiPaw.09G123800' => 'cil', 'CiPaw.11G169700' => 'cil', 'CiPaw.12G118300' => 'cil', 'CiPaw.15G071000' => 'cil', 'CiPaw.15G081900' => 'cil', 'ClCG01G024610' => 'cla', 'ClCG03G006070' => 'cla', 'ClCG05G019250' => 'cla', 'ClCG09G009500' => 'cla', 'ClCG11G008200' => 'cla', 'ClCG11G018080' => 'cla', 'COL.COLO4_17373' => 'col', 'COL.COLO4_22994' => 'col', 'COL.COLO4_26389' => 'col', 'COL.COLO4_27170' => 'col', 'COL.COLO4_31074' => 'col', 'COL.COLO4_31465' => 'col', 'COL.COLO4_36438' => 'col', 'COL.COLO4_36439' => 'col', 'Cpa.g.c38781' => 'cpa', 'Cpa.g.sc128.12' => 'cpa', 'Cpa.g.sc166.7' => 'cpa', 'Cpa.g.sc166.8' => 'cpa', 'Cpa.g.sc20.111' => 'cpa', 'Cpa.g.sc27.31' => 'cpa', 'Cpa.g.sc64.36' => 'cpa', 'Cpa.g.sc64.37' => 'cpa', 'Cpa.g.sc66.49' => 'cpa', 'Cpa.g.sc80.64' => 'cpa', 'CsaV3_1G012320' => 'csa', 'CsaV3_2G008480' => 'csa', 'CsaV3_2G033450' => 'csa', 'CsaV3_3G044830' => 'csa', 'CsaV3_4G033710' => 'csa', 'CsaV3_6G051730' => 'csa', 'CsaV3_7G025350' => 'csa', 'CSS0001067' => 'camsi', 'CSS0005996' => 'camsi', 'CSS0006590' => 'camsi', 'CSS0009673' => 'camsi', 'CSS0010201' => 'camsi', 'CSS0010549' => 'camsi', 'CSS0011364' => 'camsi', 'CSS0014473' => 'camsi', 'CSS0014961' => 'camsi', 'CSS0020191' => 'camsi', 'CSS0021165' => 'camsi', 'CSS0022306' => 'camsi', 'CSS0030591' => 'camsi', 'CSS0030696' => 'camsi', 'CSS0032653' => 'camsi', 'CSS0037487' => 'camsi', 'CSS0041102' => 'camsi', 'CSS0041261' => 'camsi', 'CSS0046246' => 'camsi', 'CSS0049256' => 'camsi', 'DCAR_004075' => 'dca', 'DCAR_011538' => 'dca', 'DCAR_019553' => 'dca', 'DCAR_020952' => 'dca', 'DCAR_021739' => 'dca', 'DCAR_027407' => 'dca', 'DCAR_027913' => 'dca', 'DCAR_028066' => 'dca', 'Dinv05899' => 'din', 'Dinv07563' => 'din', 'Dinv08010' => 'din', 'Dinv14125' => 'din', 'Dinv20172' => 'din', 'Dinv30743' => 'din', 'Dinv31229' => 'din', 'Dinv34162' => 'din', 'Dinv36028' => 'din', 'Dinv39368' => 'din', 'Dinv40565' => 'din', 'Dinv41706' => 'din', 'Duzib052G0089' => 'dzi', 'Duzib116G0641' => 'dzi', 'Duzib132G0069' => 'dzi', 'Duzib132G1219' => 'dzi', 'Duzib147G0278' => 'dzi', 'Duzib160G0480' => 'dzi', 'Duzib170G0661' => 'dzi', 'Duzib177G0591' => 'dzi', 'Duzib187G1353' => 'dzi', 'Duzib192G0858' => 'dzi', 'Duzib192G0883' => 'dzi', 'Duzib213G0506' => 'dzi', 'Duzib235G0289' => 'dzi', 'Duzib251G0422' => 'dzi', 'ECA232G3898' => 'eca', 'ECA233G5950' => 'eca', 'ECA234G1699' => 'eca', 'ECA234G2421' => 'eca', 'ECA236G0426' => 'eca', 'ECA236G4331' => 'eca', 'ECA248G2573' => 'eca', 'EL10Ac1g00077' => 'bvu', 'EL10Ac1g01746' => 'bvu', 'EL10Ac2g03464' => 'bvu', 'EL10Ac4g08176' => 'bvu', 'EL10Ac7g17521' => 'bvu', 'EL10Ac8g20386' => 'bvu', 'EL10Ac9g21343' => 'bvu', 'EL10Ac9g22688' => 'bvu', 'Eucgr.B03434' => 'egr', 'Eucgr.D00618' => 'egr', 'Eucgr.E02395' => 'egr', 'Eucgr.F01129' => 'egr', 'Eucgr.F02622' => 'egr', 'Eucgr.F04207' => 'egr', 'FAN01G0570' => 'fan', 'FAN03G3351' => 'fan', 'FAN06G3702' => 'fan', 'FAN07G2149' => 'fan', 'FAN10G3758' => 'fan', 'FAN11G1170' => 'fan', 'FAN11G2050' => 'fan', 'FAN11G2724' => 'fan', 'FAN12G1700' => 'fan', 'FAN12G2028' => 'fan', 'FAN15G1160' => 'fan', 'FAN15G3063' => 'fan', 'FAN16G2540' => 'fan', 'FAN16G3077' => 'fan', 'FAN16G3624' => 'fan', 'FAN17G0221' => 'fan', 'FAN20G2492' => 'fan', 'FAN20G2905' => 'fan', 'FAN21G0548' => 'fan', 'FAN21G1300' => 'fan', 'FAN22G0077' => 'fan', 'FAN22G1315' => 'fan', 'FAN24G1280' => 'fan', 'FAN24G1445' => 'fan', 'FAN24G3527' => 'fan', 'FAN25G0464' => 'fan', 'FAN25G2885' => 'fan', 'FAN25G3270' => 'fan', 'FAN27G1101' => 'fan', 'FAN27G2846' => 'fan', 'FAN27G3524' => 'fan', 'FvH4_2g11770' => 'fve', 'FvH4_2g15630' => 'fve', 'FvH4_3g05570' => 'fve', 'FvH4_3g09110' => 'fve', 'FvH4_3g19940' => 'fve', 'FvH4_4g04821' => 'fve', 'FvH4_4g31480' => 'fve', 'FvH4_7g01740' => 'fve', 'Glyma.05G130400' => 'gma', 'Glyma.05G156400' => 'gma', 'Glyma.07G197000' => 'gma', 'Glyma.08G085151' => 'gma', 'Glyma.08G114500' => 'gma', 'Glyma.08G300400' => 'gma', 'Glyma.10G215800' => 'gma', 'Glyma.12G224400' => 'gma', 'Glyma.13G179300' => 'gma', 'Glyma.13G218151' => 'gma', 'Glyma.13G238800' => 'gma', 'Glyma.13G276900' => 'gma', 'Glyma.14G078200' => 'gma', 'Glyma.15G074500' => 'gma', 'Glyma.15G094100' => 'gma', 'Glyma.17G247200' => 'gma', 'Glyma.18G120100' => 'gma', 'Glyma.20G176000' => 'gma', 'Gohir.A01G063600' => 'ghi', 'Gohir.A01G170301' => 'ghi', 'Gohir.A02G060500' => 'ghi', 'Gohir.A05G133850' => 'ghi', 'Gohir.A05G161400' => 'ghi', 'Gohir.A06G012900' => 'ghi', 'Gohir.A06G035901' => 'ghi', 'Gohir.A06G127100' => 'ghi', 'Gohir.A06G210500' => 'ghi', 'Gohir.A08G008650' => 'ghi', 'Gohir.A09G072700' => 'ghi', 'Gohir.A09G088301' => 'ghi', 'Gohir.A10G040600' => 'ghi', 'Gohir.A12G036300' => 'ghi', 'Gohir.A12G143350' => 'ghi', 'Gohir.A12G165500' => 'ghi', 'Gohir.A13G145700' => 'ghi', 'Gohir.D01G050000' => 'ghi', 'Gohir.D01G051366' => 'ghi', 'Gohir.D01G161350' => 'ghi', 'Gohir.D02G065900' => 'ghi', 'Gohir.D05G164200' => 'ghi', 'Gohir.D05G355500' => 'ghi', 'Gohir.D06G010400' => 'ghi', 'Gohir.D06G111250' => 'ghi', 'Gohir.D06G132000' => 'ghi', 'Gohir.D06G210500' => 'ghi', 'Gohir.D07G165675' => 'ghi', 'Gohir.D08G062240' => 'ghi', 'Gohir.D08G086101' => 'ghi', 'Gohir.D08G138060' => 'ghi', 'Gohir.D09G072300' => 'ghi', 'Gohir.D10G041400' => 'ghi', 'Gohir.D11G191020' => 'ghi', 'Gohir.D11G212066' => 'ghi', 'Gohir.D12G036300' => 'ghi', 'Gohir.D12G168600' => 'ghi', 'Gohir.D13G150600' => 'ghi', 'Gorai.001G057300' => 'gra', 'Gorai.002G069900' => 'gra', 'Gorai.002G200000' => 'gra', 'Gorai.003G067600' => 'gra', 'Gorai.005G074800' => 'gra', 'Gorai.006G087300' => 'gra', 'Gorai.008G037500' => 'gra', 'Gorai.008G181400' => 'gra', 'Gorai.009G169400' => 'gra', 'Gorai.009G387900' => 'gra', 'Gorai.010G013300' => 'gra', 'Gorai.010G153800' => 'gra', 'Gorai.010G255800' => 'gra', 'Gorai.011G043700' => 'gra', 'Gorai.011G198900' => 'gra', 'Gorai.013G168400' => 'gra', 'GSVIVG01005212001' => 'vvi', 'GSVIVG01006163001' => 'vvi', 'GSVIVG01009625001' => 'vvi', 'GSVIVG01014338001' => 'vvi', 'GSVIVG01020005001' => 'vvi', 'GSVIVG01021450001' => 'vvi', 'GSVIVG01023975001' => 'vvi', 'GSVIVG01034490001' => 'vvi', 'HanXRQChr04g0112071' => 'han', 'HanXRQChr05g0131151' => 'han', 'HanXRQChr09g0262371' => 'han', 'HanXRQChr09g0268401' => 'han', 'HanXRQChr10g0279241' => 'han', 'HanXRQChr10g0297961' => 'han', 'HanXRQChr11g0326231' => 'han', 'HanXRQChr11g0328471' => 'han', 'HanXRQChr16g0507941' => 'han', 'HanXRQChr17g0560211' => 'han', 'Haze_02108' => 'cav', 'Haze_02428' => 'cav', 'Haze_05593' => 'cav', 'Haze_06448' => 'cav', 'Haze_09427' => 'cav', 'Haze_12022' => 'cav', 'Haze_17612' => 'cav', 'Haze_17928' => 'cav', 'Hma1.2p1_0032F.1_g019250' => 'hma', 'Hma1.2p1_0163F.1_g072690' => 'hma', 'Hma1.2p1_0265F.1_g106710' => 'hma', 'Hma1.2p1_0286F.1_g113970' => 'hma', 'Hma1.2p1_0363F.1_g136640' => 'hma', 'Hma1.2p1_0584F.1_g183470' => 'hma', 'Hma1.2p1_0885F.1_g232570' => 'hma', 'HPP92_006022' => 'vpl', 'HPP92_007320' => 'vpl', 'HPP92_011521' => 'vpl', 'HPP92_019387' => 'vpl', 'HPP92_024038' => 'vpl', 'Hund05891' => 'sun', 'Hund06450' => 'sun', 'Hund12053' => 'sun', 'Hund16800' => 'sun', 'Hund21222' => 'sun', 'Hund22896' => 'sun', 'Hund23746' => 'sun', 'Hund27083' => 'sun', 'Lalb_Chr02g0141831' => 'lal', 'Lalb_Chr02g0141841' => 'lal', 'Lalb_Chr05g0220411' => 'lal', 'Lalb_Chr06g0162081' => 'lal', 'Lalb_Chr09g0327651' => 'lal', 'Lalb_Chr13g0295051' => 'lal', 'Lalb_Chr15g0086801' => 'lal', 'Lalb_Chr16g0383781' => 'lal', 'Lalb_Chr16g0383791' => 'lal', 'Lalb_Chr18g0055441' => 'lal', 'Lalb_Chr18g0059611' => 'lal', 'Lalb_Chr20g0109661' => 'lal', 'Lalb_Chr20g0109831' => 'lal', 'Lalb_Chr20g0121871' => 'lal', 'Lalb_Chr22g0355361' => 'lal', 'Lalb_Chr25g0286371' => 'lal', 'Lj1A1187G43' => 'lonja', 'Lj1A1205T50' => 'lonja', 'Lj1A800G33' => 'lonja', 'Lj1C1187T7' => 'lonja', 'Lj1C843T11' => 'lonja', 'Lj1g0010940' => 'lja', 'Lj2A288T69' => 'lonja', 'Lj3g0024276' => 'lja', 'Lj4A47T76' => 'lonja', 'Lj4g0005805' => 'lja', 'Lj4g0006097' => 'lja', 'Lj4g0008528' => 'lja', 'Lj4g0024907' => 'lja', 'Lj5g0012472' => 'lja', 'Lj5g0018648' => 'lja', 'Lj6C789G1' => 'lonja', 'Lj6g0004000' => 'lja', 'Lj7A292G67' => 'lonja', 'Lj7A292T64' => 'lonja', 'Lj9A400T58' => 'lonja', 'Lsat_1_v5_gn_1_126181' => 'lsa', 'Lsat_1_v5_gn_4_123041' => 'lsa', 'Lsat_1_v5_gn_4_133620' => 'lsa', 'Lsat_1_v5_gn_4_53221' => 'lsa', 'Lsat_1_v5_gn_4_71961' => 'lsa', 'Lsat_1_v5_gn_7_105241' => 'lsa', 'Lsat_1_v5_gn_7_21361' => 'lsa', 'Lsat_1_v5_gn_7_28860' => 'lsa', 'Lsat_1_v5_gn_7_31260' => 'lsa', 'Lsat_1_v5_gn_8_52801' => 'lsa', 'Manes.02G191400' => 'mes', 'Manes.03G110100' => 'mes', 'Manes.04G071100' => 'mes', 'Manes.05G100500' => 'mes', 'Manes.05G164700' => 'mes', 'Manes.15G087000' => 'mes', 'Manes.15G121500' => 'mes', 'Manes.16G028300' => 'mes', 'Manes.17G046100' => 'mes', 'Manes.17G069800' => 'mes', 'Manes.18G100500' => 'mes', 'Mapoly0002s0109' => 'mpo', 'Mapoly0024s0007' => 'mpo', 'Mapoly0089s0032' => 'mpo', 'MBI04_g42241_MAGBIO' => 'mbi', 'MBI05_g11988_MAGBIO' => 'mbi', 'MBI05_g35452_MAGBIO' => 'mbi', 'MBI07_g30179_MAGBIO' => 'mbi', 'MBI07_g35859_MAGBIO' => 'mbi', 'MBI07_g35860_MAGBIO' => 'mbi', 'MBI07_g37166_MAGBIO' => 'mbi', 'MBI08_g18172_MAGBIO' => 'mbi', 'MBI09_g08441_MAGBIO' => 'mbi', 'MBI13_g01676_MAGBIO' => 'mbi', 'MBI14_g42955_MAGBIO' => 'mbi', 'MBI16_g13161_MAGBIO' => 'mbi', 'MBI17_g27204_MAGBIO' => 'mbi', 'MBI19_g21595_MAGBIO' => 'mbi', 'MD00G1148400' => 'mdo', 'MD02G1301200' => 'mdo', 'MD03G1227800' => 'mdo', 'MD05G1041100' => 'mdo', 'MD05G1124800' => 'mdo', 'MD05G1284000' => 'mdo', 'MD05G1338800' => 'mdo', 'MD05G1338900' => 'mdo', 'MD07G1022800' => 'mdo', 'MD10G1047500' => 'mdo', 'MD10G1127500' => 'mdo', 'MD10G1262300' => 'mdo', 'MD10G1293800' => 'mdo', 'MD16G1074300' => 'mdo', 'Medtr1g021670' => 'mtr', 'Medtr1g096320' => 'mtr', 'Medtr2g013690' => 'mtr', 'Medtr2g019450' => 'mtr', 'Medtr2g085170' => 'mtr', 'Medtr4g088785' => 'mtr', 'Medtr8g055930' => 'mtr', 'Medtr8g085850' => 'mtr', 'MELO3C002605.2' => 'cme', 'MELO3C003891.2' => 'cme', 'MELO3C004012.2' => 'cme', 'MELO3C007134.2' => 'cme', 'MELO3C008118.2' => 'cme', 'MELO3C016700.2' => 'cme', 'MELO3C024127.2' => 'cme', 'MELO3C033361.2' => 'cme', 'MELO3C033362.2' => 'cme', 'Migut.C00430' => 'egut', 'Migut.C01246' => 'egut', 'Migut.E00101' => 'egut', 'Migut.H01486' => 'egut', 'Migut.H01939' => 'egut', 'Migut.K00360' => 'egut', 'Migut.M00910' => 'egut', 'Migut.M01139' => 'egut', 'Migut.N02677' => 'egut', 'MSTRG.13252' => 'ama', 'MSTRG.14701' => 'ama', 'MSTRG.1521' => 'ama', 'MSTRG.15884' => 'ama', 'MSTRG.16242' => 'ama', 'MSTRG.22285' => 'ama', 'MSTRG.22444' => 'ama', 'MSTRG.2349' => 'ama', 'MSTRG.26308' => 'ama', 'MSTRG.28296' => 'ama', 'MSTRG.9895' => 'ama', 'Nitab4.5_0000110g0060' => 'nta', 'Nitab4.5_0000420g0130' => 'nta', 'Nitab4.5_0000422g0030' => 'nta', 'Nitab4.5_0000560g0180' => 'nta', 'Nitab4.5_0000703g0100' => 'nta', 'Nitab4.5_0000786g0200' => 'nta', 'Nitab4.5_0001336g0020' => 'nta', 'Nitab4.5_0001796g0030' => 'nta', 'Nitab4.5_0003348g0060' => 'nta', 'Nitab4.5_0003698g0040' => 'nta', 'Nitab4.5_0003942g0090' => 'nta', 'Nitab4.5_0004775g0070' => 'nta', 'Nitab4.5_0004864g0030' => 'nta', 'Nitab4.5_0005615g0020' => 'nta', 'Nitab4.5_0009288g0030' => 'nta', 'Nitab4.5_0009341g0010' => 'nta', 'Nitab4.5_0009535g0010' => 'nta', 'Nn1g03995' => 'nnu', 'Nn1g04100' => 'nnu', 'Nn1g06530' => 'nnu', 'Nn3g16404' => 'nnu', 'Nn3g17212' => 'nnu', 'Nn3g20776' => 'nnu', 'Nn3g21923' => 'nnu', 'Nn5g27737' => 'nnu', 'Nn5g29461' => 'nnu', 'Nn7g38355' => 'nnu', 'Nn8g39873' => 'nnu', 'Oeu000548.2' => 'oeu', 'Oeu004672.1' => 'oeu', 'Oeu015605.2' => 'oeu', 'Oeu016092.1' => 'oeu', 'Oeu017879.3' => 'oeu', 'Oeu024910.1' => 'oeu', 'Oeu028965.1' => 'oeu', 'Oeu031269.1' => 'oeu', 'Oeu031270.1' => 'oeu', 'Oeu032535.1' => 'oeu', 'Oeu034151.1' => 'oeu', 'Oeu034152.1' => 'oeu', 'Oeu034588.2' => 'oeu', 'Oeu050846.1' => 'oeu', 'Oeu050849.2' => 'oeu', 'Oeu051063.2' => 'oeu', 'Oeu052368.1' => 'oeu', 'Oeu052370.1' => 'oeu', 'Os01g0210400' => 'osa', 'Os01g0304300' => 'osa', 'Os01g0749100' => 'osa', 'Os02g0745800' => 'osa', 'Os03g0769050' => 'osa', 'Os05g0531500' => 'osa', 'Os06g0724300' => 'osa', 'Os11g0198100' => 'osa', 'Peaxi162Scf00069g01425' => 'pax', 'Peaxi162Scf00280g00811' => 'pax', 'Peaxi162Scf00310g00615' => 'pax', 'Peaxi162Scf00362g00542' => 'pax', 'Peaxi162Scf00461g00310' => 'pax', 'Peaxi162Scf00530g00118' => 'pax', 'Peaxi162Scf00541g00057' => 'pax', 'Peaxi162Scf00661g00017' => 'pax', 'Peaxi162Scf00926g00027' => 'pax', 'Peaxi162Scf01064g00263' => 'pax', 'Peaxi162Scf01211g00135' => 'pax', 'PGR004G2336' => 'pgr', 'PGR042G0327' => 'pgr', 'PGR042G1957' => 'pgr', 'PGR042G2003' => 'pgr', 'PGR042G3929' => 'pgr', 'PGR083G1137' => 'pgr', 'PGR083G1364' => 'pgr', 'PGSC0003DMG400003381' => 'stu', 'PGSC0003DMG400003417' => 'stu', 'PGSC0003DMG400008981' => 'stu', 'PGSC0003DMG400012417' => 'stu', 'PGSC0003DMG400012823' => 'stu', 'PGSC0003DMG400016885' => 'stu', 'PGSC0003DMG400022812' => 'stu', 'PGSC0003DMG400029726' => 'stu', 'PGSC0003DMG401009243' => 'stu', 'PGSC0003DMG401031505' => 'stu', 'PGSC0003DMG402031505' => 'stu', 'Phvul.001G017600' => 'pvu', 'Phvul.002G193500' => 'pvu', 'Phvul.002G228900' => 'pvu', 'Phvul.002G236800' => 'pvu', 'Phvul.003G049500' => 'pvu', 'Phvul.005G072000' => 'pvu', 'Phvul.006G164800' => 'pvu', 'Phvul.006G185100' => 'pvu', 'Phvul.007G090000' => 'pvu', 'Potri.001G399800' => 'ptr', 'Potri.002G149900' => 'ptr', 'Potri.004G044100' => 'ptr', 'Potri.004G177600' => 'ptr', 'Potri.009G138000' => 'ptr', 'Potri.010G094000' => 'ptr', 'Potri.011G053000' => 'ptr', 'Potri.011G119300' => 'ptr', 'Potri.013G113700' => 'ptr', 'Potri.018G107800' => 'ptr', 'Potri.019G084100' => 'ptr', 'Pp3c14_23720' => 'ppa', 'Pp3c16_6340' => 'ppa', 'Pp3c23_13420' => 'ppa', 'Pp3c24_2740' => 'ppa', 'Pp3c25_860' => 'ppa', 'Pp3c8_21750' => 'ppa', 'Prupe.1G273000' => 'ppe', 'Prupe.1G273700' => 'ppe', 'Prupe.1G274100' => 'ppe', 'Prupe.2G023300' => 'ppe', 'Prupe.4G048000' => 'ppe', 'Prupe.4G080400' => 'ppe', 'Prupe.4G181200' => 'ppe', 'Prupe.8G056900' => 'ppe', 'Prupe.8G168700' => 'ppe', 'Psat1g189080' => 'psa', 'Psat1g204760' => 'psa', 'Psat4g175560' => 'psa', 'Psat4g177720' => 'psa', 'Psat5g244240' => 'psa', 'Psat6g010720' => 'psa', 'Psat6g187200' => 'psa', 'Psat7g072040' => 'psa', 'PSO017G3501' => 'pso', 'PSO063G2148' => 'pso', 'PSO063G5608' => 'pso', 'PSO210G6392' => 'pso', 'PSO541G2319' => 'pso', 'PSO541G2836' => 'pso', 'PSO541G4012' => 'pso', 'PSO541G6253' => 'pso', 'PSO675G0580' => 'pso', 'PSO675G0856' => 'pso', 'PSO675G5635' => 'pso', 'PSO675G9157' => 'pso', 'PSO832G1660' => 'pso', 'PSO832G1969' => 'pso', 'QL02p007186' => 'qlo', 'QL02p033904' => 'qlo', 'QL03p064391' => 'qlo', 'QL05p040593' => 'qlo', 'QL05p058242' => 'qlo', 'QL08p021825' => 'qlo', 'QL11p004981' => 'qlo', 'RcHm_v2.0_Chr1g0318301' => 'rch', 'RcHm_v2.0_Chr4g0418501' => 'rch', 'RcHm_v2.0_Chr4g0439971' => 'rch', 'RcHm_v2.0_Chr5g0008541' => 'rch', 'RcHm_v2.0_Chr5g0014101' => 'rch', 'RcHm_v2.0_Chr5g0014131' => 'rch', 'RcHm_v2.0_Chr5g0033621' => 'rch', 'RcHm_v2.0_Chr6g0272041' => 'rch', 'RcHm_v2.0_Chr6g0278831' => 'rch', 'Rhsim02G0130400' => 'rsi', 'Rhsim02G0171100' => 'rsi', 'Rhsim05G0053000' => 'rsi', 'Rhsim05G0053100' => 'rsi', 'Rhsim06G0096500' => 'rsi', 'Rhsim06G0096600' => 'rsi', 'Rhsim06G0199100' => 'rsi', 'Rhsim12G0062300' => 'rsi', 'Rhsim12G0062800' => 'rsi', 'Sabra02G0118600' => 'sbr', 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'Solyc03g079860.2' => 'sly', 'Solyc04g079770.3' => 'sly', 'Solyc05g007430.4' => 'sly', 'Solyc07g063150.3' => 'sly', 'Solyc08g016620.3' => 'sly', 'Solyc09g057590.3' => 'sly', 'Solyc09g057600.1' => 'sly', 'Solyc10g009050.3' => 'sly', 'Solyc11g017420.2' => 'sly', 'Sopen01g053810' => 'spe', 'Sopen02g023040' => 'spe', 'Sopen03g002440' => 'spe', 'Sopen04g033350' => 'spe', 'Sopen05g003310' => 'spe', 'Sopen07g004050' => 'spe', 'Sopen07g031340' => 'spe', 'Sopen08g006990' => 'spe', 'Sopen10g004830' => 'spe', 'Sopen11g009370' => 'spe', 'Sp1g24450' => 'spa', 'Sp1g29670' => 'spa', 'Sp1g39600' => 'spa', 'Sp2g11080' => 'spa', 'Sp2g13970' => 'spa', 'Sp4g16130' => 'spa', 'Sp6g13080' => 'spa', 'Sp7g37270' => 'spa', 'TAR371G0065' => 'tar', 'TAR376G0340' => 'tar', 'TAR376G0435' => 'tar', 'TAR381G0002' => 'tar', 'TAR381G1236' => 'tar', 'TAR624G0055' => 'tar', 'TAR624G0324' => 'tar', 'TAR624G0696' => 'tar', 'TAR624G0906' => 'tar', 'TAR625G0107' => 'tar', 'TAR626G0015' => 'tar', 'TAR626G1356' => 'tar', 'TAR627G0888' => 'tar', 'TAR628G0399' => 'tar', 'TAR628G1327' => 'tar', 'TAR629G2831' => 'tar', 'TAR629G2874' => 'tar', 'TAR633G1432' => 'tar', 'TAR633G2771' => 'tar', 'THA.LOC104803394' => 'tha', 'THA.LOC104805153' => 'tha', 'THA.LOC104806784' => 'tha', 'THA.LOC104810473' => 'tha', 'THA.LOC104813100' => 'tha', 'THA.LOC104814215' => 'tha', 'THA.LOC104815554' => 'tha', 'THA.LOC104820544' => 'tha', 'THA.LOC104824754' => 'tha', 'THA.LOC104827717' => 'tha', 'Thecc.02G031400' => 'tca', 'Thecc.02G055900' => 'tca', 'Thecc.02G350800' => 'tca', 'Thecc.06G150900' => 'tca', 'Thecc.06G186600' => 'tca', 'Thecc.07G089600' => 'tca', 'Thecc.08G020400' => 'tca', 'Thecc.08G182100' => 'tca', 'Thhalv10000873m.g' => 'esa', 'Thhalv10004185m.g' => 'esa', 'Thhalv10006981m.g' => 'esa', 'Thhalv10007204m.g' => 'esa', 'Thhalv10011374m.g' => 'esa', 'Thhalv10013482m.g' => 'esa', 'Thhalv10017801m.g' => 'esa', 'Thhalv10024983m.g' => 'esa', 'TPR.G12072' => 'tpr', 'TPR.G15769' => 'tpr', 'TPR.G16504' => 'tpr', 'TPR.G16506' => 'tpr', 'TPR.G24345' => 'tpr', 'TPR.G26666' => 'tpr', 'TPR.G27320' => 'tpr', 'TPR.G31819' => 'tpr', 'TPR.G38879' => 'tpr', 'TPR.G39015' => 'tpr', 'TPR.G8819' => 'tpr', 'TWI09G0924' => 'twi', 'TWI12G0811' => 'twi', 'TWI12G1294' => 'twi', 'TWI31G0150' => 'twi', 'TWI36G1262' => 'twi', 'TWI38G1287' => 'twi', 'TWI38G1633' => 'twi', 'TWI38G1982' => 'twi', 'TWI39G0116' => 'twi', 'TWI60G1011' => 'twi', 'TWI63G0171' => 'twi', 'TWI73G0839' => 'twi', 'TWI79G1511' => 'twi', 'unitig_0.g915' => 'ugi', 'unitig_0.g916' => 'ugi', 'unitig_21.g20219' => 'ugi', 'unitig_21.g20416' => 'ugi', 'unitig_578.g16132' => 'ugi', 'unitig_578.g16718' => 'ugi', 'unitig_62.g23481' => 'ugi', 'unitig_744.g24535' => 'ugi', 'unitig_749.g13525' => 'ugi', 'vmacro01248' => 'vma', 'vmacro02290' => 'vma', 'vmacro10946' => 'vma', 'vmacro11865' => 'vma', 'vmacro12493' => 'vma', 'vmacro17322' => 'vma', 'vmacro21599' => 'vma', 'vmacro23041' => 'vma', 'VMungo0251G0004' => 'vmu', 'VMungo0251G2639' => 'vmu', 'VMungo0251G2967' => 'vmu', 'VMungo0540G0864' => 'vmu', 'VMungo0540G1569' => 'vmu', 'VMungo0647G0317' => 'vmu', 'VMungo0720G1373' => 'vmu', 'VMungo0720G1508' => 'vmu', 'VMungo1080G0485' => 'vmu', 'VMungo1215G3177' => 'vmu', 'Zm00001eb112600' => 'zma', 'Zm00001eb120220' => 'zma', 'Zm00001eb153240' => 'zma', 'Zm00001eb168880' => 'zma', 'Zm00001eb213920' => 'zma', 'Zm00001eb228280' => 'zma', 'Zm00001eb254580' => 'zma', 'Zm00001eb272180' => 'zma', 'Zm00001eb293190' => 'zma', 'Zm00001eb322930' => 'zma', 'Zm00001eb353360' => 'zma', 'Zm00001eb353390' => 'zma', 'Zm00001eb353430' => 'zma', 'Zm00001eb353440' => 'zma', 'Zm00001eb353780' => 'zma' ), 'gf_id' => 'HOM05D000499', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000499' ), 'data_identifier' => 'HOM05D000499', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000499', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1066', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p29780' => 'bna', 'A02p33180' => 'bna', 'A03p16470' => 'bna', 'A03p66010' => 'bna', 'A04p25970' => 'bna', 'A06p01270' => 'bna', 'A06p46080' => 'bna', 'A07p11400' => 'bna', 'A08p01840' => 'bna', 'A08p08230' => 'bna', 'A08p25740' => 'bna', 'A09p32070' => 'bna', 'A09p37830' => 'bna', 'A09p42840' => 'bna', 'A09p42850' => 'bna', 'Aa31LG10G2060' => 'aar', 'Aa31LG2G7410' => 'aar', 'Aa31LG6G10200' => 'aar', 'Aa31LG6G16680' => 'aar', 'Aa31LG6G8470' => 'aar', 'Aa31LG9G12730' => 'aar', 'Aa31LG9G13680' => 'aar', 'Aa31LG9G14920' => 'aar', 'Aa31LG9G6650' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4977' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5467' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3254' => 'aag', 'Actinidia02578' => 'ach', 'Actinidia07693' => 'ach', 'Actinidia08413' => 'ach', 'Actinidia08414' => 'ach', 'Actinidia15289' => 'ach', 'Actinidia19871' => 'ach', 'Actinidia21475' => 'ach', 'Actinidia22576' => 'ach', 'Actinidia28327' => 'ach', 'Actinidia32491' => 'ach', 'Actinidia39463' => 'ach', 'Actinidia39571' => 'ach', 'Ah.01g013750' => 'amhyb', 'Ah.01g023210' => 'amhyb', 'Ah.04g164850' => 'amhyb', 'Ah.05g178060' => 'amhyb', 'Ah.07g204270' => 'amhyb', 'Ah.07g208480' => 'amhyb', 'Ah.09g237410' => 'amhyb', 'Ah.14g089460' => 'amhyb', 'AL1G41790' => 'aly', 'AL1G49050' => 'aly', 'AL1G53810' => 'aly', 'AL1G61400' => 'aly', 'AL4G18580' => 'aly', 'AL5G12510' => 'aly', 'AL5G12540' => 'aly', 'AL6G43230' => 'aly', 'AL7G10370' => 'aly', 'AL7G19250' => 'aly', 'AL8G12240' => 'aly', 'AL8G18540' => 'aly', 'Aqoxy1G02409' => 'aox', 'Aqoxy2G03993' => 'aox', 'Aqoxy3G03357' => 'aox', 'Aqoxy4G00785' => 'aox', 'Aqoxy5G02598' => 'aox', 'Aqoxy6G00132' => 'aox', 'Aqoxy7G01776' => 'aox', 'Aqoxy7G02316' => 'aox', 'Aqoxy7G03973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.12AFKW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B8730' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27IQR1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3F75VG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3RE0GA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41TCQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.527VTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FIR39' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5W8UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DA38EV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ63HS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H1I32C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HC27T5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4M8AP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7N3CZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9UVDZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LS1NQA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT1D4B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SKC4TM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCFV76' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF9Q1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQWD9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1ZM88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WE07RT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YCK7VH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJE6Q6' => 'arhy', 'AT1G28240' => 'ath', 'AT1G34550' => 'ath', 'AT1G53040' => 'ath', 'AT2G02910' => 'ath', 'AT4G09630' => 'ath', 'AT4G38500' => 'ath', 'AT5G42660' => 'ath', 'AT5G46220' => 'ath', 'ATR0152G026' => 'atr', 'ATR0564G343' => 'atr', 'ATR0706G151' => 'atr', 'ATR0733G207' => 'atr', 'ATR0751G234' => 'atr', 'ATR0807G048' => 'atr', 'ATR1091G084' => 'atr', 'Atru.chr10.1229' => 'acertr', 'Atru.chr10.1230' => 'acertr', 'Atru.chr10.1874' => 'acertr', 'Atru.chr11.1808' => 'acertr', 'Atru.chr13.1795' => 'acertr', 'Atru.chr13.570' => 'acertr', 'Atru.chr2.2608' => 'acertr', 'Atru.chr2.2609' => 'acertr', 'Atru.chr5.3428' => 'acertr', 'Atru.chr8.1171' => 'acertr', 'AUR62004651' => 'cqu', 'AUR62008675' => 'cqu', 'AUR62010014' => 'cqu', 'AUR62013004' => 'cqu', 'AUR62014825' => 'cqu', 'AUR62015015' => 'cqu', 'AUR62015151' => 'cqu', 'AUR62017020' => 'cqu', 'AUR62019422' => 'cqu', 'AUR62023570' => 'cqu', 'AUR62025571' => 'cqu', 'AUR62029098' => 'cqu', 'AUR62033863' => 'cqu', 'AUR62034296' => 'cqu', 'AUR62040075' => 'cqu', 'BcaB02g07334' => 'bca', 'BcaB02g10575' => 'bca', 'BcaB03g12119' => 'bca', 'BcaB03g12120' => 'bca', 'BcaB03g13945' => 'bca', 'BcaB04g17123' => 'bca', 'BcaB04g17867' => 'bca', 'BcaB04g19839' => 'bca', 'BcaB07g30317' => 'bca', 'BcaB07g32432' => 'bca', 'BcaB07g33362' => 'bca', 'BcaB08g36611' => 'bca', 'BcaC01g00028' => 'bca', 'BcaC01g01356' => 'bca', 'BcaC01g02034' => 'bca', 'BcaC01g06051' => 'bca', 'BcaC03g16839' => 'bca', 'BcaC03g17176' => 'bca', 'BcaC05g26829' => 'bca', 'BcaC06g31490' => 'bca', 'BcaC06g35344' => 'bca', 'BcaC06g36570' => 'bca', 'BcaC07g37537' => 'bca', 'BcaC08g43491' => 'bca', 'BcaC08g43773' => 'bca', 'BcaNung00234' => 'bca', 'BcaNung01982' => 'bca', 'BcaNung03707' => 'bca', 'BcaNung06454' => 'bca', 'BolC2t10762H' => 'bol', 'BolC2t11191H' => 'bol', 'BolC3t14322H' => 'bol', 'BolC3t19747H' => 'bol', 'BolC3t21425H' => 'bol', 'BolC4t27800H' => 'bol', 'BolC5t31423H' => 'bol', 'BolC6t35951H' => 'bol', 'BolC6t36282H' => 'bol', 'BolC7t40678H' => 'bol', 'BolC7t40679H' => 'bol', 'BolC7t42222H' => 'bol', 'BolC7t43492H' => 'bol', 'BolC7t46785H' => 'bol', 'BolC8t47853H' => 'bol', 'BolC9t56805H' => 'bol', 'BraA02t08000Z' => 'bra', 'BraA02t08341Z' => 'bra', 'BraA03t10936Z' => 'bra', 'BraA03t15657Z' => 'bra', 'BraA04t18100Z' => 'bra', 'BraA05t20523Z' => 'bra', 'BraA06t23353Z' => 'bra', 'BraA06t27473Z' => 'bra', 'BraA06t27769Z' => 'bra', 'BraA07t28928Z' => 'bra', 'BraA08t32236Z' => 'bra', 'BraA08t32841Z' => 'bra', 'BraA08t34524Z' => 'bra', 'BraA09t38742Z' => 'bra', 'BraA09t39295Z' => 'bra', 'C02p47180' => 'bna', 'C02p50990' => 'bna', 'C03p19360' => 'bna', 'C03p74950' => 'bna', 'C03p91000' => 'bna', 'C04p63260' => 'bna', 'C05p27050' => 'bna', 'C06p08750' => 'bna', 'C06p11490' => 'bna', 'C07p02820' => 'bna', 'C07p17180' => 'bna', 'C07p29440' => 'bna', 'C07p63730' => 'bna', 'C09p39260' => 'bna', 'CAN.G1164.34' => 'can', 'CAN.G1164.39' => 'can', 'CAN.G1530.3' => 'can', 'CAN.G162.61' => 'can', 'CAN.G176.6' => 'can', 'CAN.G289.49' => 'can', 'CAN.G370.21' => 'can', 'CAN.G370.22' => 'can', 'CAN.G371.117' => 'can', 'CAN.G58.37' => 'can', 'CAN.G588.98' => 'can', 'CANSAT21G2266' => 'cansat', 'CANSAT25G2799' => 'cansat', 'CANSAT35G0862' => 'cansat', 'CANSAT35G1704' => 'cansat', 'CANSAT35G1760' => 'cansat', 'CANSAT56G3971' => 'cansat', 'CANSAT56G4116' => 'cansat', 'CANSAT80G1259' => 'cansat', 'CARHR027730' => 'chi', 'CARHR033880' => 'chi', 'CARHR043270' => 'chi', 'CARHR145330' => 'chi', 'CARHR145340' => 'chi', 'CARHR175570' => 'chi', 'CARHR181570' => 'chi', 'CARHR258470' => 'chi', 'CARHR260490' => 'chi', 'CARHR294220' => 'chi', 'Carub.0001s2668' => 'cru', 'Carub.0001s3257' => 'cru', 'Carub.0001s4220' => 'cru', 'Carub.0005s0179' => 'cru', 'Carub.0006s2807' => 'cru', 'Carub.0007s0039' => 'cru', 'Carub.0008s0169' => 'cru', 'Carub.0008s0636' => 'cru', 'Ca_00338_v3' => 'car', 'Ca_00542_v3' => 'car', 'Ca_01844_v3' => 'car', 'Ca_10611_v3' => 'car', 'Ca_13326_v3' => 'car', 'Ca_17944_v3' => 'car', 'Ca_18546_v3' => 'car', 'Ca_24219_v3' => 'car', 'Ca_29972_v3' => 'car', 'CBR_g3681' => 'cbr', 'CBR_g40021' => 'cbr', 'Cc01_g08140' => 'ccan', 'Cc02_g13410' => 'ccan', 'Cc02_g37480' => 'ccan', 'Cc05_g12030' => 'ccan', 'Cc09_g03370' => 'ccan', 'Cc09_g10300' => 'ccan', 'Cc10_g03530' => 'ccan', 'Cc10_g11380' => 'ccan', 'CDE01G0176' => 'cde', 'CDE02G0675' => 'cde', 'CDE02G0942' => 'cde', 'CDE02G1153' => 'cde', 'CDE02G4177' => 'cde', 'CDE04G2117' => 'cde', 'CDE04G2736' => 'cde', 'CDE08G1161' => 'cde', 'CDE09G1238' => 'cde', 'Cfa000467' => 'cfa', 'Cfa000947' => 'cfa', 'Cfa004969' => 'cfa', 'Cfa005284' => 'cfa', 'Cfa008993' => 'cfa', 'Cfa018187' => 'cfa', 'Cfa018454' => 'cfa', 'Cfa020585' => 'cfa', 'Ciclev10000424m.g' => 'ccl', 'Ciclev10003605m.g' => 'ccl', 'Ciclev10007828m.g' => 'ccl', 'Ciclev10014620m.g' => 'ccl', 'Ciclev10015169m.g' => 'ccl', 'Ciclev10018291m.g' => 'ccl', 'Ciclev10028256m.g' => 'ccl', 'Ciclev10033822m.g' => 'ccl', 'CiPaw.05G060300' => 'cil', 'CiPaw.05G085000' => 'cil', 'CiPaw.06G083700' => 'cil', 'CiPaw.06G120300' => 'cil', 'CiPaw.09G060500' => 'cil', 'CiPaw.09G123800' => 'cil', 'CiPaw.11G169700' => 'cil', 'CiPaw.12G118300' => 'cil', 'CiPaw.15G071000' => 'cil', 'CiPaw.15G081900' => 'cil', 'ClCG01G024610' => 'cla', 'ClCG03G006070' => 'cla', 'ClCG05G019250' => 'cla', 'ClCG09G009500' => 'cla', 'ClCG11G008200' => 'cla', 'ClCG11G018080' => 'cla', 'COL.COLO4_17373' => 'col', 'COL.COLO4_22994' => 'col', 'COL.COLO4_26389' => 'col', 'COL.COLO4_27170' => 'col', 'COL.COLO4_31074' => 'col', 'COL.COLO4_31465' => 'col', 'COL.COLO4_36438' => 'col', 'COL.COLO4_36439' => 'col', 'Cpa.g.c38781' => 'cpa', 'Cpa.g.sc128.12' => 'cpa', 'Cpa.g.sc166.7' => 'cpa', 'Cpa.g.sc166.8' => 'cpa', 'Cpa.g.sc20.111' => 'cpa', 'Cpa.g.sc27.31' => 'cpa', 'Cpa.g.sc64.36' => 'cpa', 'Cpa.g.sc64.37' => 'cpa', 'Cpa.g.sc66.49' => 'cpa', 'Cpa.g.sc80.64' => 'cpa', 'CsaV3_1G012320' => 'csa', 'CsaV3_2G008480' => 'csa', 'CsaV3_2G033450' => 'csa', 'CsaV3_3G044830' => 'csa', 'CsaV3_4G033710' => 'csa', 'CsaV3_6G051730' => 'csa', 'CsaV3_7G025350' => 'csa', 'CSS0001067' => 'camsi', 'CSS0005996' => 'camsi', 'CSS0006590' => 'camsi', 'CSS0009673' => 'camsi', 'CSS0010201' => 'camsi', 'CSS0010549' => 'camsi', 'CSS0011364' => 'camsi', 'CSS0014473' => 'camsi', 'CSS0014961' => 'camsi', 'CSS0020191' => 'camsi', 'CSS0021165' => 'camsi', 'CSS0022306' => 'camsi', 'CSS0030591' => 'camsi', 'CSS0030696' => 'camsi', 'CSS0032653' => 'camsi', 'CSS0037487' => 'camsi', 'CSS0041102' => 'camsi', 'CSS0041261' => 'camsi', 'CSS0046246' => 'camsi', 'CSS0049256' => 'camsi', 'DCAR_004075' => 'dca', 'DCAR_011538' => 'dca', 'DCAR_019553' => 'dca', 'DCAR_020952' => 'dca', 'DCAR_021739' => 'dca', 'DCAR_027407' => 'dca', 'DCAR_027913' => 'dca', 'DCAR_028066' => 'dca', 'Dinv05899' => 'din', 'Dinv07563' => 'din', 'Dinv08010' => 'din', 'Dinv14125' => 'din', 'Dinv20172' => 'din', 'Dinv30743' => 'din', 'Dinv31229' => 'din', 'Dinv34162' => 'din', 'Dinv36028' => 'din', 'Dinv39368' => 'din', 'Dinv40565' => 'din', 'Dinv41706' => 'din', 'Duzib052G0089' => 'dzi', 'Duzib116G0641' => 'dzi', 'Duzib132G0069' => 'dzi', 'Duzib132G1219' => 'dzi', 'Duzib147G0278' => 'dzi', 'Duzib160G0480' => 'dzi', 'Duzib170G0661' => 'dzi', 'Duzib177G0591' => 'dzi', 'Duzib187G1353' => 'dzi', 'Duzib192G0858' => 'dzi', 'Duzib192G0883' => 'dzi', 'Duzib213G0506' => 'dzi', 'Duzib235G0289' => 'dzi', 'Duzib251G0422' => 'dzi', 'ECA232G3898' => 'eca', 'ECA233G5950' => 'eca', 'ECA234G1699' => 'eca', 'ECA234G2421' => 'eca', 'ECA236G0426' => 'eca', 'ECA236G4331' => 'eca', 'ECA248G2573' => 'eca', 'EL10Ac1g00077' => 'bvu', 'EL10Ac1g01746' => 'bvu', 'EL10Ac2g03464' => 'bvu', 'EL10Ac4g08176' => 'bvu', 'EL10Ac7g17521' => 'bvu', 'EL10Ac8g20386' => 'bvu', 'EL10Ac9g21343' => 'bvu', 'EL10Ac9g22688' => 'bvu', 'Eucgr.B03434' => 'egr', 'Eucgr.D00618' => 'egr', 'Eucgr.E02395' => 'egr', 'Eucgr.F01129' => 'egr', 'Eucgr.F02622' => 'egr', 'Eucgr.F04207' => 'egr', 'FAN01G0570' => 'fan', 'FAN03G3351' => 'fan', 'FAN06G3702' => 'fan', 'FAN07G2149' => 'fan', 'FAN10G3758' => 'fan', 'FAN11G1170' => 'fan', 'FAN11G2050' => 'fan', 'FAN11G2724' => 'fan', 'FAN12G1700' => 'fan', 'FAN12G2028' => 'fan', 'FAN15G1160' => 'fan', 'FAN15G3063' => 'fan', 'FAN16G2540' => 'fan', 'FAN16G3077' => 'fan', 'FAN16G3624' => 'fan', 'FAN17G0221' => 'fan', 'FAN20G2492' => 'fan', 'FAN20G2905' => 'fan', 'FAN21G0548' => 'fan', 'FAN21G1300' => 'fan', 'FAN22G0077' => 'fan', 'FAN22G1315' => 'fan', 'FAN24G1280' => 'fan', 'FAN24G1445' => 'fan', 'FAN24G3527' => 'fan', 'FAN25G0464' => 'fan', 'FAN25G2885' => 'fan', 'FAN25G3270' => 'fan', 'FAN27G1101' => 'fan', 'FAN27G2846' => 'fan', 'FAN27G3524' => 'fan', 'FvH4_2g11770' => 'fve', 'FvH4_2g15630' => 'fve', 'FvH4_3g05570' => 'fve', 'FvH4_3g09110' => 'fve', 'FvH4_3g19940' => 'fve', 'FvH4_4g04821' => 'fve', 'FvH4_4g31480' => 'fve', 'FvH4_7g01740' => 'fve', 'Glyma.05G130400' => 'gma', 'Glyma.05G156400' => 'gma', 'Glyma.07G197000' => 'gma', 'Glyma.08G085151' => 'gma', 'Glyma.08G114500' => 'gma', 'Glyma.08G300400' => 'gma', 'Glyma.10G215800' => 'gma', 'Glyma.12G224400' => 'gma', 'Glyma.13G179300' => 'gma', 'Glyma.13G218151' => 'gma', 'Glyma.13G238800' => 'gma', 'Glyma.13G276900' => 'gma', 'Glyma.14G078200' => 'gma', 'Glyma.15G074500' => 'gma', 'Glyma.15G094100' => 'gma', 'Glyma.17G247200' => 'gma', 'Glyma.18G120100' => 'gma', 'Glyma.20G176000' => 'gma', 'Gohir.A01G063600' => 'ghi', 'Gohir.A01G170301' => 'ghi', 'Gohir.A02G060500' => 'ghi', 'Gohir.A05G133850' => 'ghi', 'Gohir.A05G161400' => 'ghi', 'Gohir.A06G012900' => 'ghi', 'Gohir.A06G035901' => 'ghi', 'Gohir.A06G127100' => 'ghi', 'Gohir.A06G210500' => 'ghi', 'Gohir.A08G008650' => 'ghi', 'Gohir.A09G072700' => 'ghi', 'Gohir.A09G088301' => 'ghi', 'Gohir.A10G040600' => 'ghi', 'Gohir.A12G036300' => 'ghi', 'Gohir.A12G143350' => 'ghi', 'Gohir.A12G165500' => 'ghi', 'Gohir.A13G145700' => 'ghi', 'Gohir.D01G050000' => 'ghi', 'Gohir.D01G051366' => 'ghi', 'Gohir.D01G161350' => 'ghi', 'Gohir.D02G065900' => 'ghi', 'Gohir.D05G164200' => 'ghi', 'Gohir.D05G355500' => 'ghi', 'Gohir.D06G010400' => 'ghi', 'Gohir.D06G111250' => 'ghi', 'Gohir.D06G132000' => 'ghi', 'Gohir.D06G210500' => 'ghi', 'Gohir.D07G165675' => 'ghi', 'Gohir.D08G062240' => 'ghi', 'Gohir.D08G086101' => 'ghi', 'Gohir.D08G138060' => 'ghi', 'Gohir.D09G072300' => 'ghi', 'Gohir.D10G041400' => 'ghi', 'Gohir.D11G191020' => 'ghi', 'Gohir.D11G212066' => 'ghi', 'Gohir.D12G036300' => 'ghi', 'Gohir.D12G168600' => 'ghi', 'Gohir.D13G150600' => 'ghi', 'Gorai.001G057300' => 'gra', 'Gorai.002G069900' => 'gra', 'Gorai.002G200000' => 'gra', 'Gorai.003G067600' => 'gra', 'Gorai.005G074800' => 'gra', 'Gorai.006G087300' => 'gra', 'Gorai.008G037500' => 'gra', 'Gorai.008G181400' => 'gra', 'Gorai.009G169400' => 'gra', 'Gorai.009G387900' => 'gra', 'Gorai.010G013300' => 'gra', 'Gorai.010G153800' => 'gra', 'Gorai.010G255800' => 'gra', 'Gorai.011G043700' => 'gra', 'Gorai.011G198900' => 'gra', 'Gorai.013G168400' => 'gra', 'GSVIVG01005212001' => 'vvi', 'GSVIVG01006163001' => 'vvi', 'GSVIVG01009625001' => 'vvi', 'GSVIVG01014338001' => 'vvi', 'GSVIVG01020005001' => 'vvi', 'GSVIVG01021450001' => 'vvi', 'GSVIVG01023975001' => 'vvi', 'GSVIVG01034490001' => 'vvi', 'HanXRQChr04g0112071' => 'han', 'HanXRQChr05g0131151' => 'han', 'HanXRQChr09g0262371' => 'han', 'HanXRQChr09g0268401' => 'han', 'HanXRQChr10g0279241' => 'han', 'HanXRQChr10g0297961' => 'han', 'HanXRQChr11g0326231' => 'han', 'HanXRQChr11g0328471' => 'han', 'HanXRQChr16g0507941' => 'han', 'HanXRQChr17g0560211' => 'han', 'Haze_02108' => 'cav', 'Haze_02428' => 'cav', 'Haze_05593' => 'cav', 'Haze_06448' => 'cav', 'Haze_09427' => 'cav', 'Haze_12022' => 'cav', 'Haze_17612' => 'cav', 'Haze_17928' => 'cav', 'Hma1.2p1_0032F.1_g019250' => 'hma', 'Hma1.2p1_0163F.1_g072690' => 'hma', 'Hma1.2p1_0265F.1_g106710' => 'hma', 'Hma1.2p1_0286F.1_g113970' => 'hma', 'Hma1.2p1_0363F.1_g136640' => 'hma', 'Hma1.2p1_0584F.1_g183470' => 'hma', 'Hma1.2p1_0885F.1_g232570' => 'hma', 'HPP92_006022' => 'vpl', 'HPP92_007320' => 'vpl', 'HPP92_011521' => 'vpl', 'HPP92_019387' => 'vpl', 'HPP92_024038' => 'vpl', 'Hund05891' => 'sun', 'Hund06450' => 'sun', 'Hund12053' => 'sun', 'Hund16800' => 'sun', 'Hund21222' => 'sun', 'Hund22896' => 'sun', 'Hund23746' => 'sun', 'Hund27083' => 'sun', 'Lalb_Chr02g0141831' => 'lal', 'Lalb_Chr02g0141841' => 'lal', 'Lalb_Chr05g0220411' => 'lal', 'Lalb_Chr06g0162081' => 'lal', 'Lalb_Chr09g0327651' => 'lal', 'Lalb_Chr13g0295051' => 'lal', 'Lalb_Chr15g0086801' => 'lal', 'Lalb_Chr16g0383781' => 'lal', 'Lalb_Chr16g0383791' => 'lal', 'Lalb_Chr18g0055441' => 'lal', 'Lalb_Chr18g0059611' => 'lal', 'Lalb_Chr20g0109661' => 'lal', 'Lalb_Chr20g0109831' => 'lal', 'Lalb_Chr20g0121871' => 'lal', 'Lalb_Chr22g0355361' => 'lal', 'Lalb_Chr25g0286371' => 'lal', 'Lj1A1187G43' => 'lonja', 'Lj1A1205T50' => 'lonja', 'Lj1A800G33' => 'lonja', 'Lj1C1187T7' => 'lonja', 'Lj1C843T11' => 'lonja', 'Lj1g0010940' => 'lja', 'Lj2A288T69' => 'lonja', 'Lj3g0024276' => 'lja', 'Lj4A47T76' => 'lonja', 'Lj4g0005805' => 'lja', 'Lj4g0006097' => 'lja', 'Lj4g0008528' => 'lja', 'Lj4g0024907' => 'lja', 'Lj5g0012472' => 'lja', 'Lj5g0018648' => 'lja', 'Lj6C789G1' => 'lonja', 'Lj6g0004000' => 'lja', 'Lj7A292G67' => 'lonja', 'Lj7A292T64' => 'lonja', 'Lj9A400T58' => 'lonja', 'Lsat_1_v5_gn_1_126181' => 'lsa', 'Lsat_1_v5_gn_4_123041' => 'lsa', 'Lsat_1_v5_gn_4_133620' => 'lsa', 'Lsat_1_v5_gn_4_53221' => 'lsa', 'Lsat_1_v5_gn_4_71961' => 'lsa', 'Lsat_1_v5_gn_7_105241' => 'lsa', 'Lsat_1_v5_gn_7_21361' => 'lsa', 'Lsat_1_v5_gn_7_28860' => 'lsa', 'Lsat_1_v5_gn_7_31260' => 'lsa', 'Lsat_1_v5_gn_8_52801' => 'lsa', 'Manes.02G191400' => 'mes', 'Manes.03G110100' => 'mes', 'Manes.04G071100' => 'mes', 'Manes.05G100500' => 'mes', 'Manes.05G164700' => 'mes', 'Manes.15G087000' => 'mes', 'Manes.15G121500' => 'mes', 'Manes.16G028300' => 'mes', 'Manes.17G046100' => 'mes', 'Manes.17G069800' => 'mes', 'Manes.18G100500' => 'mes', 'Mapoly0002s0109' => 'mpo', 'Mapoly0024s0007' => 'mpo', 'Mapoly0089s0032' => 'mpo', 'MBI04_g42241_MAGBIO' => 'mbi', 'MBI05_g11988_MAGBIO' => 'mbi', 'MBI05_g35452_MAGBIO' => 'mbi', 'MBI07_g30179_MAGBIO' => 'mbi', 'MBI07_g35859_MAGBIO' => 'mbi', 'MBI07_g35860_MAGBIO' => 'mbi', 'MBI07_g37166_MAGBIO' => 'mbi', 'MBI08_g18172_MAGBIO' => 'mbi', 'MBI09_g08441_MAGBIO' => 'mbi', 'MBI13_g01676_MAGBIO' => 'mbi', 'MBI14_g42955_MAGBIO' => 'mbi', 'MBI16_g13161_MAGBIO' => 'mbi', 'MBI17_g27204_MAGBIO' => 'mbi', 'MBI19_g21595_MAGBIO' => 'mbi', 'MD00G1148400' => 'mdo', 'MD02G1301200' => 'mdo', 'MD03G1227800' => 'mdo', 'MD05G1041100' => 'mdo', 'MD05G1124800' => 'mdo', 'MD05G1284000' => 'mdo', 'MD05G1338800' => 'mdo', 'MD05G1338900' => 'mdo', 'MD07G1022800' => 'mdo', 'MD10G1047500' => 'mdo', 'MD10G1127500' => 'mdo', 'MD10G1262300' => 'mdo', 'MD10G1293800' => 'mdo', 'MD16G1074300' => 'mdo', 'Medtr1g021670' => 'mtr', 'Medtr1g096320' => 'mtr', 'Medtr2g013690' => 'mtr', 'Medtr2g019450' => 'mtr', 'Medtr2g085170' => 'mtr', 'Medtr4g088785' => 'mtr', 'Medtr8g055930' => 'mtr', 'Medtr8g085850' => 'mtr', 'MELO3C002605.2' => 'cme', 'MELO3C003891.2' => 'cme', 'MELO3C004012.2' => 'cme', 'MELO3C007134.2' => 'cme', 'MELO3C008118.2' => 'cme', 'MELO3C016700.2' => 'cme', 'MELO3C024127.2' => 'cme', 'MELO3C033361.2' => 'cme', 'MELO3C033362.2' => 'cme', 'Migut.C00430' => 'egut', 'Migut.C01246' => 'egut', 'Migut.E00101' => 'egut', 'Migut.H01486' => 'egut', 'Migut.H01939' => 'egut', 'Migut.K00360' => 'egut', 'Migut.M00910' => 'egut', 'Migut.M01139' => 'egut', 'Migut.N02677' => 'egut', 'MSTRG.13252' => 'ama', 'MSTRG.14701' => 'ama', 'MSTRG.1521' => 'ama', 'MSTRG.15884' => 'ama', 'MSTRG.16242' => 'ama', 'MSTRG.22285' => 'ama', 'MSTRG.22444' => 'ama', 'MSTRG.2349' => 'ama', 'MSTRG.26308' => 'ama', 'MSTRG.28296' => 'ama', 'MSTRG.9895' => 'ama', 'Nitab4.5_0000110g0060' => 'nta', 'Nitab4.5_0000420g0130' => 'nta', 'Nitab4.5_0000422g0030' => 'nta', 'Nitab4.5_0000560g0180' => 'nta', 'Nitab4.5_0000703g0100' => 'nta', 'Nitab4.5_0000786g0200' => 'nta', 'Nitab4.5_0001336g0020' => 'nta', 'Nitab4.5_0001796g0030' => 'nta', 'Nitab4.5_0003348g0060' => 'nta', 'Nitab4.5_0003698g0040' => 'nta', 'Nitab4.5_0003942g0090' => 'nta', 'Nitab4.5_0004775g0070' => 'nta', 'Nitab4.5_0004864g0030' => 'nta', 'Nitab4.5_0005615g0020' => 'nta', 'Nitab4.5_0009288g0030' => 'nta', 'Nitab4.5_0009341g0010' => 'nta', 'Nitab4.5_0009535g0010' => 'nta', 'Nn1g03995' => 'nnu', 'Nn1g04100' => 'nnu', 'Nn1g06530' => 'nnu', 'Nn3g16404' => 'nnu', 'Nn3g17212' => 'nnu', 'Nn3g20776' => 'nnu', 'Nn3g21923' => 'nnu', 'Nn5g27737' => 'nnu', 'Nn5g29461' => 'nnu', 'Nn7g38355' => 'nnu', 'Nn8g39873' => 'nnu', 'Oeu000548.2' => 'oeu', 'Oeu004672.1' => 'oeu', 'Oeu015605.2' => 'oeu', 'Oeu016092.1' => 'oeu', 'Oeu017879.3' => 'oeu', 'Oeu024910.1' => 'oeu', 'Oeu028965.1' => 'oeu', 'Oeu031269.1' => 'oeu', 'Oeu031270.1' => 'oeu', 'Oeu032535.1' => 'oeu', 'Oeu034151.1' => 'oeu', 'Oeu034152.1' => 'oeu', 'Oeu034588.2' => 'oeu', 'Oeu050846.1' => 'oeu', 'Oeu050849.2' => 'oeu', 'Oeu051063.2' => 'oeu', 'Oeu052368.1' => 'oeu', 'Oeu052370.1' => 'oeu', 'Os01g0210400' => 'osa', 'Os01g0304300' => 'osa', 'Os01g0749100' => 'osa', 'Os02g0745800' => 'osa', 'Os03g0769050' => 'osa', 'Os05g0531500' => 'osa', 'Os06g0724300' => 'osa', 'Os11g0198100' => 'osa', 'Peaxi162Scf00069g01425' => 'pax', 'Peaxi162Scf00280g00811' => 'pax', 'Peaxi162Scf00310g00615' => 'pax', 'Peaxi162Scf00362g00542' => 'pax', 'Peaxi162Scf00461g00310' => 'pax', 'Peaxi162Scf00530g00118' => 'pax', 'Peaxi162Scf00541g00057' => 'pax', 'Peaxi162Scf00661g00017' => 'pax', 'Peaxi162Scf00926g00027' => 'pax', 'Peaxi162Scf01064g00263' => 'pax', 'Peaxi162Scf01211g00135' => 'pax', 'PGR004G2336' => 'pgr', 'PGR042G0327' => 'pgr', 'PGR042G1957' => 'pgr', 'PGR042G2003' => 'pgr', 'PGR042G3929' => 'pgr', 'PGR083G1137' => 'pgr', 'PGR083G1364' => 'pgr', 'PGSC0003DMG400003381' => 'stu', 'PGSC0003DMG400003417' => 'stu', 'PGSC0003DMG400008981' => 'stu', 'PGSC0003DMG400012417' => 'stu', 'PGSC0003DMG400012823' => 'stu', 'PGSC0003DMG400016885' => 'stu', 'PGSC0003DMG400022812' => 'stu', 'PGSC0003DMG400029726' => 'stu', 'PGSC0003DMG401009243' => 'stu', 'PGSC0003DMG401031505' => 'stu', 'PGSC0003DMG402031505' => 'stu', 'Phvul.001G017600' => 'pvu', 'Phvul.002G193500' => 'pvu', 'Phvul.002G228900' => 'pvu', 'Phvul.002G236800' => 'pvu', 'Phvul.003G049500' => 'pvu', 'Phvul.005G072000' => 'pvu', 'Phvul.006G164800' => 'pvu', 'Phvul.006G185100' => 'pvu', 'Phvul.007G090000' => 'pvu', 'Potri.001G399800' => 'ptr', 'Potri.002G149900' => 'ptr', 'Potri.004G044100' => 'ptr', 'Potri.004G177600' => 'ptr', 'Potri.009G138000' => 'ptr', 'Potri.010G094000' => 'ptr', 'Potri.011G053000' => 'ptr', 'Potri.011G119300' => 'ptr', 'Potri.013G113700' => 'ptr', 'Potri.018G107800' => 'ptr', 'Potri.019G084100' => 'ptr', 'Pp3c14_23720' => 'ppa', 'Pp3c16_6340' => 'ppa', 'Pp3c23_13420' => 'ppa', 'Pp3c24_2740' => 'ppa', 'Pp3c25_860' => 'ppa', 'Pp3c8_21750' => 'ppa', 'Prupe.1G273000' => 'ppe', 'Prupe.1G273700' => 'ppe', 'Prupe.1G274100' => 'ppe', 'Prupe.2G023300' => 'ppe', 'Prupe.4G048000' => 'ppe', 'Prupe.4G080400' => 'ppe', 'Prupe.4G181200' => 'ppe', 'Prupe.8G056900' => 'ppe', 'Prupe.8G168700' => 'ppe', 'Psat1g189080' => 'psa', 'Psat1g204760' => 'psa', 'Psat4g175560' => 'psa', 'Psat4g177720' => 'psa', 'Psat5g244240' => 'psa', 'Psat6g010720' => 'psa', 'Psat6g187200' => 'psa', 'Psat7g072040' => 'psa', 'PSO017G3501' => 'pso', 'PSO063G2148' => 'pso', 'PSO063G5608' => 'pso', 'PSO210G6392' => 'pso', 'PSO541G2319' => 'pso', 'PSO541G2836' => 'pso', 'PSO541G4012' => 'pso', 'PSO541G6253' => 'pso', 'PSO675G0580' => 'pso', 'PSO675G0856' => 'pso', 'PSO675G5635' => 'pso', 'PSO675G9157' => 'pso', 'PSO832G1660' => 'pso', 'PSO832G1969' => 'pso', 'QL02p007186' => 'qlo', 'QL02p033904' => 'qlo', 'QL03p064391' => 'qlo', 'QL05p040593' => 'qlo', 'QL05p058242' => 'qlo', 'QL08p021825' => 'qlo', 'QL11p004981' => 'qlo', 'RcHm_v2.0_Chr1g0318301' => 'rch', 'RcHm_v2.0_Chr4g0418501' => 'rch', 'RcHm_v2.0_Chr4g0439971' => 'rch', 'RcHm_v2.0_Chr5g0008541' => 'rch', 'RcHm_v2.0_Chr5g0014101' => 'rch', 'RcHm_v2.0_Chr5g0014131' => 'rch', 'RcHm_v2.0_Chr5g0033621' => 'rch', 'RcHm_v2.0_Chr6g0272041' => 'rch', 'RcHm_v2.0_Chr6g0278831' => 'rch', 'Rhsim02G0130400' => 'rsi', 'Rhsim02G0171100' => 'rsi', 'Rhsim05G0053000' => 'rsi', 'Rhsim05G0053100' => 'rsi', 'Rhsim06G0096500' => 'rsi', 'Rhsim06G0096600' => 'rsi', 'Rhsim06G0199100' => 'rsi', 'Rhsim12G0062300' => 'rsi', 'Rhsim12G0062800' => 'rsi', 'Sabra02G0118600' => 'sbr', 'Sabra04G0027300' => 'sbr', 'Sabra04G0119500' => 'sbr', 'Sabra08G0112500' => 'sbr', 'Sabra11G0036800' => 'sbr', 'Sabra11G0103800' => 'sbr', 'Sabra13G0096300' => 'sbr', 'Sabra16G0262300' => 'sbr', 'Sabra18G0091700' => 'sbr', 'Sabra19G0095400' => 'sbr', 'SalBow6G3080' => 'sbo', 'SalBow7G1157' => 'sbo', 'SalBow7G2123' => 'sbo', 'SalBow7G2285' => 'sbo', 'SalBow7G3537' => 'sbo', 'SalBow8G2947' => 'sbo', 'SalBow8G4463' => 'sbo', 'SalBow8G5466' => 'sbo', 'Sc01g0001750' => 'sci', 'Sc02g0006640' => 'sci', 'Sc02g0006670' => 'sci', 'Sc04g0008220' => 'sci', 'Sc05g0006190' => 'sci', 'Sc08g0002760' => 'sci', 'Sc17g0006170' => 'sci', 'Sc22g0002050' => 'sci', 'Sc23g0001190' => 'sci', 'Sc24g0000980' => 'sci', 'Sed0006245' => 'sed', 'Sed0007543' => 'sed', 'Sed0009411' => 'sed', 'Sed0010765' => 'sed', 'Sed0012944' => 'sed', 'Sed0014682' => 'sed', 'Sed0016174' => 'sed', 'Sed0016796' => 'sed', 'Sed0020317' => 'sed', 'Sed0021467' => 'sed', 'SEGI_01316' => 'sgi', 'SEGI_03374' => 'sgi', 'SEGI_16265' => 'sgi', 'SEGI_18569' => 'sgi', 'SEGI_20351' => 'sgi', 'SEGI_26395' => 'sgi', 'SEGI_29469' => 'sgi', 'SEGI_34771' => 'sgi', 'SEGI_36769' => 'sgi', 'SEGI_37139' => 'sgi', 'SGA_v2.0_scaffold100G29687' => 'sas', 'SGA_v2.0_scaffold118G32472' => 'sas', 'SGA_v2.0_scaffold14G07051' => 'sas', 'SGA_v2.0_scaffold183G39845' => 'sas', 'SGA_v2.0_scaffold1G00174' => 'sas', 'SGA_v2.0_scaffold22G09714' => 'sas', 'SGA_v2.0_scaffold333G48992' => 'sas', 'SGA_v2.0_scaffold46G17491' => 'sas', 'SGA_v2.0_scaffold49G18294' => 'sas', 'SGA_v2.0_scaffold63G21658' => 'sas', 'SHI01741' => 'shi', 'SHI05771' => 'shi', 'SHI18077' => 'shi', 'SHI20525' => 'shi', 'SHI20527' => 'shi', 'SHI20528' => 'shi', 'SMO172G0185' => 'smo', 'SMO198G0020' => 'smo', 'SMO351G0006' => 'smo', 'SMO356G0118' => 'smo', 'SMO358G0296' => 'smo', 'SMO367G0079' => 'smo', 'SMO367G1277' => 'smo', 'Solyc01g014220.3' => 'sly', 'Solyc01g111770.2' => 'sly', 'Solyc02g078180.3' => 'sly', 'Solyc03g006430.3' => 'sly', 'Solyc03g006456.1' => 'sly', 'Solyc03g079860.2' => 'sly', 'Solyc04g079770.3' => 'sly', 'Solyc05g007430.4' => 'sly', 'Solyc07g063150.3' => 'sly', 'Solyc08g016620.3' => 'sly', 'Solyc09g057590.3' => 'sly', 'Solyc09g057600.1' => 'sly', 'Solyc10g009050.3' => 'sly', 'Solyc11g017420.2' => 'sly', 'Sopen01g053810' => 'spe', 'Sopen02g023040' => 'spe', 'Sopen03g002440' => 'spe', 'Sopen04g033350' => 'spe', 'Sopen05g003310' => 'spe', 'Sopen07g004050' => 'spe', 'Sopen07g031340' => 'spe', 'Sopen08g006990' => 'spe', 'Sopen10g004830' => 'spe', 'Sopen11g009370' => 'spe', 'Sp1g24450' => 'spa', 'Sp1g29670' => 'spa', 'Sp1g39600' => 'spa', 'Sp2g11080' => 'spa', 'Sp2g13970' => 'spa', 'Sp4g16130' => 'spa', 'Sp6g13080' => 'spa', 'Sp7g37270' => 'spa', 'TAR371G0065' => 'tar', 'TAR376G0340' => 'tar', 'TAR376G0435' => 'tar', 'TAR381G0002' => 'tar', 'TAR381G1236' => 'tar', 'TAR624G0055' => 'tar', 'TAR624G0324' => 'tar', 'TAR624G0696' => 'tar', 'TAR624G0906' => 'tar', 'TAR625G0107' => 'tar', 'TAR626G0015' => 'tar', 'TAR626G1356' => 'tar', 'TAR627G0888' => 'tar', 'TAR628G0399' => 'tar', 'TAR628G1327' => 'tar', 'TAR629G2831' => 'tar', 'TAR629G2874' => 'tar', 'TAR633G1432' => 'tar', 'TAR633G2771' => 'tar', 'THA.LOC104803394' => 'tha', 'THA.LOC104805153' => 'tha', 'THA.LOC104806784' => 'tha', 'THA.LOC104810473' => 'tha', 'THA.LOC104813100' => 'tha', 'THA.LOC104814215' => 'tha', 'THA.LOC104815554' => 'tha', 'THA.LOC104820544' => 'tha', 'THA.LOC104824754' => 'tha', 'THA.LOC104827717' => 'tha', 'Thecc.02G031400' => 'tca', 'Thecc.02G055900' => 'tca', 'Thecc.02G350800' => 'tca', 'Thecc.06G150900' => 'tca', 'Thecc.06G186600' => 'tca', 'Thecc.07G089600' => 'tca', 'Thecc.08G020400' => 'tca', 'Thecc.08G182100' => 'tca', 'Thhalv10000873m.g' => 'esa', 'Thhalv10004185m.g' => 'esa', 'Thhalv10006981m.g' => 'esa', 'Thhalv10007204m.g' => 'esa', 'Thhalv10011374m.g' => 'esa', 'Thhalv10013482m.g' => 'esa', 'Thhalv10017801m.g' => 'esa', 'Thhalv10024983m.g' => 'esa', 'TPR.G12072' => 'tpr', 'TPR.G15769' => 'tpr', 'TPR.G16504' => 'tpr', 'TPR.G16506' => 'tpr', 'TPR.G24345' => 'tpr', 'TPR.G26666' => 'tpr', 'TPR.G27320' => 'tpr', 'TPR.G31819' => 'tpr', 'TPR.G38879' => 'tpr', 'TPR.G39015' => 'tpr', 'TPR.G8819' => 'tpr', 'TWI09G0924' => 'twi', 'TWI12G0811' => 'twi', 'TWI12G1294' => 'twi', 'TWI31G0150' => 'twi', 'TWI36G1262' => 'twi', 'TWI38G1287' => 'twi', 'TWI38G1633' => 'twi', 'TWI38G1982' => 'twi', 'TWI39G0116' => 'twi', 'TWI60G1011' => 'twi', 'TWI63G0171' => 'twi', 'TWI73G0839' => 'twi', 'TWI79G1511' => 'twi', 'unitig_0.g915' => 'ugi', 'unitig_0.g916' => 'ugi', 'unitig_21.g20219' => 'ugi', 'unitig_21.g20416' => 'ugi', 'unitig_578.g16132' => 'ugi', 'unitig_578.g16718' => 'ugi', 'unitig_62.g23481' => 'ugi', 'unitig_744.g24535' => 'ugi', 'unitig_749.g13525' => 'ugi', 'vmacro01248' => 'vma', 'vmacro02290' => 'vma', 'vmacro10946' => 'vma', 'vmacro11865' => 'vma', 'vmacro12493' => 'vma', 'vmacro17322' => 'vma', 'vmacro21599' => 'vma', 'vmacro23041' => 'vma', 'VMungo0251G0004' => 'vmu', 'VMungo0251G2639' => 'vmu', 'VMungo0251G2967' => 'vmu', 'VMungo0540G0864' => 'vmu', 'VMungo0540G1569' => 'vmu', 'VMungo0647G0317' => 'vmu', 'VMungo0720G1373' => 'vmu', 'VMungo0720G1508' => 'vmu', 'VMungo1080G0485' => 'vmu', 'VMungo1215G3177' => 'vmu', 'Zm00001eb112600' => 'zma', 'Zm00001eb120220' => 'zma', 'Zm00001eb153240' => 'zma', 'Zm00001eb168880' => 'zma', 'Zm00001eb213920' => 'zma', 'Zm00001eb228280' => 'zma', 'Zm00001eb254580' => 'zma', 'Zm00001eb272180' => 'zma', 'Zm00001eb293190' => 'zma', 'Zm00001eb322930' => 'zma', 'Zm00001eb353360' => 'zma', 'Zm00001eb353390' => 'zma', 'Zm00001eb353430' => 'zma', 'Zm00001eb353440' => 'zma', 'Zm00001eb353780' => 'zma' ) $gf_id = 'HOM05D000499' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000499' ) $data_identifier = 'HOM05D000499' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 29, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 12, 'amhyb' => (int) 8, 'aly' => (int) 12, 'aox' => (int) 9, 'arhy' => (int) 26, 'ath' => (int) 8, 'atr' => (int) 7, 'acertr' => (int) 10, 'cqu' => (int) 15, 'bca' => (int) 29, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 11, 'cansat' => (int) 8, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 9, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 8, 'cpa' => (int) 10, 'csa' => (int) 7, 'camsi' => (int) 20, 'dca' => (int) 8, 'din' => (int) 12, 'dzi' => (int) 14, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 6, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 38, 'gra' => (int) 16, 'vvi' => (int) 8, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 5, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 11, 'lja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 11, 'mpo' => (int) 3, 'mbi' => (int) 14, 'mdo' => (int) 14, 'mtr' => (int) 8, 'cme' => (int) 9, 'egut' => (int) 9, 'ama' => (int) 11, 'nta' => (int) 17, 'nnu' => (int) 11, 'oeu' => (int) 18, 'osa' => (int) 8, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 6, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 9, 'rsi' => (int) 9, 'sbr' => (int) 10, 'sbo' => (int) 8, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 10, 'sas' => (int) 10, 'shi' => (int) 6, 'smo' => (int) 7, 'sly' => (int) 14, 'spe' => (int) 10, 'spa' => (int) 8, 'tar' => (int) 19, 'tha' => (int) 10, 'tca' => (int) 8, 'esa' => (int) 8, 'tpr' => (int) 11, 'twi' => (int) 13, 'ugi' => (int) 9, 'vma' => (int) 8, 'vmu' => (int) 10, 'zma' => (int) 15 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb353780' $species_info = array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ) $local_species = 'lonja' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000499', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1066', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p29780' => 'bna', 'A02p33180' => 'bna', 'A03p16470' => 'bna', 'A03p66010' => 'bna', 'A04p25970' => 'bna', 'A06p01270' => 'bna', 'A06p46080' => 'bna', 'A07p11400' => 'bna', 'A08p01840' => 'bna', 'A08p08230' => 'bna', 'A08p25740' => 'bna', 'A09p32070' => 'bna', 'A09p37830' => 'bna', 'A09p42840' => 'bna', 'A09p42850' => 'bna', 'Aa31LG10G2060' => 'aar', 'Aa31LG2G7410' => 'aar', 'Aa31LG6G10200' => 'aar', 'Aa31LG6G16680' => 'aar', 'Aa31LG6G8470' => 'aar', 'Aa31LG9G12730' => 'aar', 'Aa31LG9G13680' => 'aar', 'Aa31LG9G14920' => 'aar', 'Aa31LG9G6650' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4977' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5467' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3254' => 'aag', 'Actinidia02578' => 'ach', 'Actinidia07693' => 'ach', 'Actinidia08413' => 'ach', 'Actinidia08414' => 'ach', 'Actinidia15289' => 'ach', 'Actinidia19871' => 'ach', 'Actinidia21475' => 'ach', 'Actinidia22576' => 'ach', 'Actinidia28327' => 'ach', 'Actinidia32491' => 'ach', 'Actinidia39463' => 'ach', 'Actinidia39571' => 'ach', 'Ah.01g013750' => 'amhyb', 'Ah.01g023210' => 'amhyb', 'Ah.04g164850' => 'amhyb', 'Ah.05g178060' => 'amhyb', 'Ah.07g204270' => 'amhyb', 'Ah.07g208480' => 'amhyb', 'Ah.09g237410' => 'amhyb', 'Ah.14g089460' => 'amhyb', 'AL1G41790' => 'aly', 'AL1G49050' => 'aly', 'AL1G53810' => 'aly', 'AL1G61400' => 'aly', 'AL4G18580' => 'aly', 'AL5G12510' => 'aly', 'AL5G12540' => 'aly', 'AL6G43230' => 'aly', 'AL7G10370' => 'aly', 'AL7G19250' => 'aly', 'AL8G12240' => 'aly', 'AL8G18540' => 'aly', 'Aqoxy1G02409' => 'aox', 'Aqoxy2G03993' => 'aox', 'Aqoxy3G03357' => 'aox', 'Aqoxy4G00785' => 'aox', 'Aqoxy5G02598' => 'aox', 'Aqoxy6G00132' => 'aox', 'Aqoxy7G01776' => 'aox', 'Aqoxy7G02316' => 'aox', 'Aqoxy7G03973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.12AFKW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B8730' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27IQR1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3F75VG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3RE0GA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41TCQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.527VTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FIR39' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5W8UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DA38EV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ63HS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H1I32C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HC27T5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4M8AP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7N3CZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9UVDZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LS1NQA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT1D4B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SKC4TM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCFV76' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF9Q1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQWD9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1ZM88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WE07RT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YCK7VH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJE6Q6' => 'arhy', 'AT1G28240' => 'ath', 'AT1G34550' => 'ath', 'AT1G53040' => 'ath', 'AT2G02910' => 'ath', 'AT4G09630' => 'ath', 'AT4G38500' => 'ath', 'AT5G42660' => 'ath', 'AT5G46220' => 'ath', 'ATR0152G026' => 'atr', 'ATR0564G343' => 'atr', 'ATR0706G151' => 'atr', 'ATR0733G207' => 'atr', 'ATR0751G234' => 'atr', 'ATR0807G048' => 'atr', 'ATR1091G084' => 'atr', 'Atru.chr10.1229' => 'acertr', 'Atru.chr10.1230' => 'acertr', 'Atru.chr10.1874' => 'acertr', 'Atru.chr11.1808' => 'acertr', 'Atru.chr13.1795' => 'acertr', 'Atru.chr13.570' => 'acertr', 'Atru.chr2.2608' => 'acertr', 'Atru.chr2.2609' => 'acertr', 'Atru.chr5.3428' => 'acertr', 'Atru.chr8.1171' => 'acertr', 'AUR62004651' => 'cqu', 'AUR62008675' => 'cqu', 'AUR62010014' => 'cqu', 'AUR62013004' => 'cqu', 'AUR62014825' => 'cqu', 'AUR62015015' => 'cqu', 'AUR62015151' => 'cqu', 'AUR62017020' => 'cqu', 'AUR62019422' => 'cqu', 'AUR62023570' => 'cqu', 'AUR62025571' => 'cqu', 'AUR62029098' => 'cqu', 'AUR62033863' => 'cqu', 'AUR62034296' => 'cqu', 'AUR62040075' => 'cqu', 'BcaB02g07334' => 'bca', 'BcaB02g10575' => 'bca', 'BcaB03g12119' => 'bca', 'BcaB03g12120' => 'bca', 'BcaB03g13945' => 'bca', 'BcaB04g17123' => 'bca', 'BcaB04g17867' => 'bca', 'BcaB04g19839' => 'bca', 'BcaB07g30317' => 'bca', 'BcaB07g32432' => 'bca', 'BcaB07g33362' => 'bca', 'BcaB08g36611' => 'bca', 'BcaC01g00028' => 'bca', 'BcaC01g01356' => 'bca', 'BcaC01g02034' => 'bca', 'BcaC01g06051' => 'bca', 'BcaC03g16839' => 'bca', 'BcaC03g17176' => 'bca', 'BcaC05g26829' => 'bca', 'BcaC06g31490' => 'bca', 'BcaC06g35344' => 'bca', 'BcaC06g36570' => 'bca', 'BcaC07g37537' => 'bca', 'BcaC08g43491' => 'bca', 'BcaC08g43773' => 'bca', 'BcaNung00234' => 'bca', 'BcaNung01982' => 'bca', 'BcaNung03707' => 'bca', 'BcaNung06454' => 'bca', 'BolC2t10762H' => 'bol', 'BolC2t11191H' => 'bol', 'BolC3t14322H' => 'bol', 'BolC3t19747H' => 'bol', 'BolC3t21425H' => 'bol', 'BolC4t27800H' => 'bol', 'BolC5t31423H' => 'bol', 'BolC6t35951H' => 'bol', 'BolC6t36282H' => 'bol', 'BolC7t40678H' => 'bol', 'BolC7t40679H' => 'bol', 'BolC7t42222H' => 'bol', 'BolC7t43492H' => 'bol', 'BolC7t46785H' => 'bol', 'BolC8t47853H' => 'bol', 'BolC9t56805H' => 'bol', 'BraA02t08000Z' => 'bra', 'BraA02t08341Z' => 'bra', 'BraA03t10936Z' => 'bra', 'BraA03t15657Z' => 'bra', 'BraA04t18100Z' => 'bra', 'BraA05t20523Z' => 'bra', 'BraA06t23353Z' => 'bra', 'BraA06t27473Z' => 'bra', 'BraA06t27769Z' => 'bra', 'BraA07t28928Z' => 'bra', 'BraA08t32236Z' => 'bra', 'BraA08t32841Z' => 'bra', 'BraA08t34524Z' => 'bra', 'BraA09t38742Z' => 'bra', 'BraA09t39295Z' => 'bra', 'C02p47180' => 'bna', 'C02p50990' => 'bna', 'C03p19360' => 'bna', 'C03p74950' => 'bna', 'C03p91000' => 'bna', 'C04p63260' => 'bna', 'C05p27050' => 'bna', 'C06p08750' => 'bna', 'C06p11490' => 'bna', 'C07p02820' => 'bna', 'C07p17180' => 'bna', 'C07p29440' => 'bna', 'C07p63730' => 'bna', 'C09p39260' => 'bna', 'CAN.G1164.34' => 'can', 'CAN.G1164.39' => 'can', 'CAN.G1530.3' => 'can', 'CAN.G162.61' => 'can', 'CAN.G176.6' => 'can', 'CAN.G289.49' => 'can', 'CAN.G370.21' => 'can', 'CAN.G370.22' => 'can', 'CAN.G371.117' => 'can', 'CAN.G58.37' => 'can', 'CAN.G588.98' => 'can', 'CANSAT21G2266' => 'cansat', 'CANSAT25G2799' => 'cansat', 'CANSAT35G0862' => 'cansat', 'CANSAT35G1704' => 'cansat', 'CANSAT35G1760' => 'cansat', 'CANSAT56G3971' => 'cansat', 'CANSAT56G4116' => 'cansat', 'CANSAT80G1259' => 'cansat', 'CARHR027730' => 'chi', 'CARHR033880' => 'chi', 'CARHR043270' => 'chi', 'CARHR145330' => 'chi', 'CARHR145340' => 'chi', 'CARHR175570' => 'chi', 'CARHR181570' => 'chi', 'CARHR258470' => 'chi', 'CARHR260490' => 'chi', 'CARHR294220' => 'chi', 'Carub.0001s2668' => 'cru', 'Carub.0001s3257' => 'cru', 'Carub.0001s4220' => 'cru', 'Carub.0005s0179' => 'cru', 'Carub.0006s2807' => 'cru', 'Carub.0007s0039' => 'cru', 'Carub.0008s0169' => 'cru', 'Carub.0008s0636' => 'cru', 'Ca_00338_v3' => 'car', 'Ca_00542_v3' => 'car', 'Ca_01844_v3' => 'car', 'Ca_10611_v3' => 'car', 'Ca_13326_v3' => 'car', 'Ca_17944_v3' => 'car', 'Ca_18546_v3' => 'car', 'Ca_24219_v3' => 'car', 'Ca_29972_v3' => 'car', 'CBR_g3681' => 'cbr', 'CBR_g40021' => 'cbr', 'Cc01_g08140' => 'ccan', 'Cc02_g13410' => 'ccan', 'Cc02_g37480' => 'ccan', 'Cc05_g12030' => 'ccan', 'Cc09_g03370' => 'ccan', 'Cc09_g10300' => 'ccan', 'Cc10_g03530' => 'ccan', 'Cc10_g11380' => 'ccan', 'CDE01G0176' => 'cde', 'CDE02G0675' => 'cde', 'CDE02G0942' => 'cde', 'CDE02G1153' => 'cde', 'CDE02G4177' => 'cde', 'CDE04G2117' => 'cde', 'CDE04G2736' => 'cde', 'CDE08G1161' => 'cde', 'CDE09G1238' => 'cde', 'Cfa000467' => 'cfa', 'Cfa000947' => 'cfa', 'Cfa004969' => 'cfa', 'Cfa005284' => 'cfa', 'Cfa008993' => 'cfa', 'Cfa018187' => 'cfa', 'Cfa018454' => 'cfa', 'Cfa020585' => 'cfa', 'Ciclev10000424m.g' => 'ccl', 'Ciclev10003605m.g' => 'ccl', 'Ciclev10007828m.g' => 'ccl', 'Ciclev10014620m.g' => 'ccl', 'Ciclev10015169m.g' => 'ccl', 'Ciclev10018291m.g' => 'ccl', 'Ciclev10028256m.g' => 'ccl', 'Ciclev10033822m.g' => 'ccl', 'CiPaw.05G060300' => 'cil', 'CiPaw.05G085000' => 'cil', 'CiPaw.06G083700' => 'cil', 'CiPaw.06G120300' => 'cil', 'CiPaw.09G060500' => 'cil', 'CiPaw.09G123800' => 'cil', 'CiPaw.11G169700' => 'cil', 'CiPaw.12G118300' => 'cil', 'CiPaw.15G071000' => 'cil', 'CiPaw.15G081900' => 'cil', 'ClCG01G024610' => 'cla', 'ClCG03G006070' => 'cla', 'ClCG05G019250' => 'cla', 'ClCG09G009500' => 'cla', 'ClCG11G008200' => 'cla', 'ClCG11G018080' => 'cla', 'COL.COLO4_17373' => 'col', 'COL.COLO4_22994' => 'col', 'COL.COLO4_26389' => 'col', 'COL.COLO4_27170' => 'col', 'COL.COLO4_31074' => 'col', 'COL.COLO4_31465' => 'col', 'COL.COLO4_36438' => 'col', 'COL.COLO4_36439' => 'col', 'Cpa.g.c38781' => 'cpa', 'Cpa.g.sc128.12' => 'cpa', 'Cpa.g.sc166.7' => 'cpa', 'Cpa.g.sc166.8' => 'cpa', 'Cpa.g.sc20.111' => 'cpa', 'Cpa.g.sc27.31' => 'cpa', 'Cpa.g.sc64.36' => 'cpa', 'Cpa.g.sc64.37' => 'cpa', 'Cpa.g.sc66.49' => 'cpa', 'Cpa.g.sc80.64' => 'cpa', 'CsaV3_1G012320' => 'csa', 'CsaV3_2G008480' => 'csa', 'CsaV3_2G033450' => 'csa', 'CsaV3_3G044830' => 'csa', 'CsaV3_4G033710' => 'csa', 'CsaV3_6G051730' => 'csa', 'CsaV3_7G025350' => 'csa', 'CSS0001067' => 'camsi', 'CSS0005996' => 'camsi', 'CSS0006590' => 'camsi', 'CSS0009673' => 'camsi', 'CSS0010201' => 'camsi', 'CSS0010549' => 'camsi', 'CSS0011364' => 'camsi', 'CSS0014473' => 'camsi', 'CSS0014961' => 'camsi', 'CSS0020191' => 'camsi', 'CSS0021165' => 'camsi', 'CSS0022306' => 'camsi', 'CSS0030591' => 'camsi', 'CSS0030696' => 'camsi', 'CSS0032653' => 'camsi', 'CSS0037487' => 'camsi', 'CSS0041102' => 'camsi', 'CSS0041261' => 'camsi', 'CSS0046246' => 'camsi', 'CSS0049256' => 'camsi', 'DCAR_004075' => 'dca', 'DCAR_011538' => 'dca', 'DCAR_019553' => 'dca', 'DCAR_020952' => 'dca', 'DCAR_021739' => 'dca', 'DCAR_027407' => 'dca', 'DCAR_027913' => 'dca', 'DCAR_028066' => 'dca', 'Dinv05899' => 'din', 'Dinv07563' => 'din', 'Dinv08010' => 'din', 'Dinv14125' => 'din', 'Dinv20172' => 'din', 'Dinv30743' => 'din', 'Dinv31229' => 'din', 'Dinv34162' => 'din', 'Dinv36028' => 'din', 'Dinv39368' => 'din', 'Dinv40565' => 'din', 'Dinv41706' => 'din', 'Duzib052G0089' => 'dzi', 'Duzib116G0641' => 'dzi', 'Duzib132G0069' => 'dzi', 'Duzib132G1219' => 'dzi', 'Duzib147G0278' => 'dzi', 'Duzib160G0480' => 'dzi', 'Duzib170G0661' => 'dzi', 'Duzib177G0591' => 'dzi', 'Duzib187G1353' => 'dzi', 'Duzib192G0858' => 'dzi', 'Duzib192G0883' => 'dzi', 'Duzib213G0506' => 'dzi', 'Duzib235G0289' => 'dzi', 'Duzib251G0422' => 'dzi', 'ECA232G3898' => 'eca', 'ECA233G5950' => 'eca', 'ECA234G1699' => 'eca', 'ECA234G2421' => 'eca', 'ECA236G0426' => 'eca', 'ECA236G4331' => 'eca', 'ECA248G2573' => 'eca', 'EL10Ac1g00077' => 'bvu', 'EL10Ac1g01746' => 'bvu', 'EL10Ac2g03464' => 'bvu', 'EL10Ac4g08176' => 'bvu', 'EL10Ac7g17521' => 'bvu', 'EL10Ac8g20386' => 'bvu', 'EL10Ac9g21343' => 'bvu', 'EL10Ac9g22688' => 'bvu', 'Eucgr.B03434' => 'egr', 'Eucgr.D00618' => 'egr', 'Eucgr.E02395' => 'egr', 'Eucgr.F01129' => 'egr', 'Eucgr.F02622' => 'egr', 'Eucgr.F04207' => 'egr', 'FAN01G0570' => 'fan', 'FAN03G3351' => 'fan', 'FAN06G3702' => 'fan', 'FAN07G2149' => 'fan', 'FAN10G3758' => 'fan', 'FAN11G1170' => 'fan', 'FAN11G2050' => 'fan', 'FAN11G2724' => 'fan', 'FAN12G1700' => 'fan', 'FAN12G2028' => 'fan', 'FAN15G1160' => 'fan', 'FAN15G3063' => 'fan', 'FAN16G2540' => 'fan', 'FAN16G3077' => 'fan', 'FAN16G3624' => 'fan', 'FAN17G0221' => 'fan', 'FAN20G2492' => 'fan', 'FAN20G2905' => 'fan', 'FAN21G0548' => 'fan', 'FAN21G1300' => 'fan', 'FAN22G0077' => 'fan', 'FAN22G1315' => 'fan', 'FAN24G1280' => 'fan', 'FAN24G1445' => 'fan', 'FAN24G3527' => 'fan', 'FAN25G0464' => 'fan', 'FAN25G2885' => 'fan', 'FAN25G3270' => 'fan', 'FAN27G1101' => 'fan', 'FAN27G2846' => 'fan', 'FAN27G3524' => 'fan', 'FvH4_2g11770' => 'fve', 'FvH4_2g15630' => 'fve', 'FvH4_3g05570' => 'fve', 'FvH4_3g09110' => 'fve', 'FvH4_3g19940' => 'fve', 'FvH4_4g04821' => 'fve', 'FvH4_4g31480' => 'fve', 'FvH4_7g01740' => 'fve', 'Glyma.05G130400' => 'gma', 'Glyma.05G156400' => 'gma', 'Glyma.07G197000' => 'gma', 'Glyma.08G085151' => 'gma', 'Glyma.08G114500' => 'gma', 'Glyma.08G300400' => 'gma', 'Glyma.10G215800' => 'gma', 'Glyma.12G224400' => 'gma', 'Glyma.13G179300' => 'gma', 'Glyma.13G218151' => 'gma', 'Glyma.13G238800' => 'gma', 'Glyma.13G276900' => 'gma', 'Glyma.14G078200' => 'gma', 'Glyma.15G074500' => 'gma', 'Glyma.15G094100' => 'gma', 'Glyma.17G247200' => 'gma', 'Glyma.18G120100' => 'gma', 'Glyma.20G176000' => 'gma', 'Gohir.A01G063600' => 'ghi', 'Gohir.A01G170301' => 'ghi', 'Gohir.A02G060500' => 'ghi', 'Gohir.A05G133850' => 'ghi', 'Gohir.A05G161400' => 'ghi', 'Gohir.A06G012900' => 'ghi', 'Gohir.A06G035901' => 'ghi', 'Gohir.A06G127100' => 'ghi', 'Gohir.A06G210500' => 'ghi', 'Gohir.A08G008650' => 'ghi', 'Gohir.A09G072700' => 'ghi', 'Gohir.A09G088301' => 'ghi', 'Gohir.A10G040600' => 'ghi', 'Gohir.A12G036300' => 'ghi', 'Gohir.A12G143350' => 'ghi', 'Gohir.A12G165500' => 'ghi', 'Gohir.A13G145700' => 'ghi', 'Gohir.D01G050000' => 'ghi', 'Gohir.D01G051366' => 'ghi', 'Gohir.D01G161350' => 'ghi', 'Gohir.D02G065900' => 'ghi', 'Gohir.D05G164200' => 'ghi', 'Gohir.D05G355500' => 'ghi', 'Gohir.D06G010400' => 'ghi', 'Gohir.D06G111250' => 'ghi', 'Gohir.D06G132000' => 'ghi', 'Gohir.D06G210500' => 'ghi', 'Gohir.D07G165675' => 'ghi', 'Gohir.D08G062240' => 'ghi', 'Gohir.D08G086101' => 'ghi', 'Gohir.D08G138060' => 'ghi', 'Gohir.D09G072300' => 'ghi', 'Gohir.D10G041400' => 'ghi', 'Gohir.D11G191020' => 'ghi', 'Gohir.D11G212066' => 'ghi', 'Gohir.D12G036300' => 'ghi', 'Gohir.D12G168600' => 'ghi', 'Gohir.D13G150600' => 'ghi', 'Gorai.001G057300' => 'gra', 'Gorai.002G069900' => 'gra', 'Gorai.002G200000' => 'gra', 'Gorai.003G067600' => 'gra', 'Gorai.005G074800' => 'gra', 'Gorai.006G087300' => 'gra', 'Gorai.008G037500' => 'gra', 'Gorai.008G181400' => 'gra', 'Gorai.009G169400' => 'gra', 'Gorai.009G387900' => 'gra', 'Gorai.010G013300' => 'gra', 'Gorai.010G153800' => 'gra', 'Gorai.010G255800' => 'gra', 'Gorai.011G043700' => 'gra', 'Gorai.011G198900' => 'gra', 'Gorai.013G168400' => 'gra', 'GSVIVG01005212001' => 'vvi', 'GSVIVG01006163001' => 'vvi', 'GSVIVG01009625001' => 'vvi', 'GSVIVG01014338001' => 'vvi', 'GSVIVG01020005001' => 'vvi', 'GSVIVG01021450001' => 'vvi', 'GSVIVG01023975001' => 'vvi', 'GSVIVG01034490001' => 'vvi', 'HanXRQChr04g0112071' => 'han', 'HanXRQChr05g0131151' => 'han', 'HanXRQChr09g0262371' => 'han', 'HanXRQChr09g0268401' => 'han', 'HanXRQChr10g0279241' => 'han', 'HanXRQChr10g0297961' => 'han', 'HanXRQChr11g0326231' => 'han', 'HanXRQChr11g0328471' => 'han', 'HanXRQChr16g0507941' => 'han', 'HanXRQChr17g0560211' => 'han', 'Haze_02108' => 'cav', 'Haze_02428' => 'cav', 'Haze_05593' => 'cav', 'Haze_06448' => 'cav', 'Haze_09427' => 'cav', 'Haze_12022' => 'cav', 'Haze_17612' => 'cav', 'Haze_17928' => 'cav', 'Hma1.2p1_0032F.1_g019250' => 'hma', 'Hma1.2p1_0163F.1_g072690' => 'hma', 'Hma1.2p1_0265F.1_g106710' => 'hma', 'Hma1.2p1_0286F.1_g113970' => 'hma', 'Hma1.2p1_0363F.1_g136640' => 'hma', 'Hma1.2p1_0584F.1_g183470' => 'hma', 'Hma1.2p1_0885F.1_g232570' => 'hma', 'HPP92_006022' => 'vpl', 'HPP92_007320' => 'vpl', 'HPP92_011521' => 'vpl', 'HPP92_019387' => 'vpl', 'HPP92_024038' => 'vpl', 'Hund05891' => 'sun', 'Hund06450' => 'sun', 'Hund12053' => 'sun', 'Hund16800' => 'sun', 'Hund21222' => 'sun', 'Hund22896' => 'sun', 'Hund23746' => 'sun', 'Hund27083' => 'sun', 'Lalb_Chr02g0141831' => 'lal', 'Lalb_Chr02g0141841' => 'lal', 'Lalb_Chr05g0220411' => 'lal', 'Lalb_Chr06g0162081' => 'lal', 'Lalb_Chr09g0327651' => 'lal', 'Lalb_Chr13g0295051' => 'lal', 'Lalb_Chr15g0086801' => 'lal', 'Lalb_Chr16g0383781' => 'lal', 'Lalb_Chr16g0383791' => 'lal', 'Lalb_Chr18g0055441' => 'lal', 'Lalb_Chr18g0059611' => 'lal', 'Lalb_Chr20g0109661' => 'lal', 'Lalb_Chr20g0109831' => 'lal', 'Lalb_Chr20g0121871' => 'lal', 'Lalb_Chr22g0355361' => 'lal', 'Lalb_Chr25g0286371' => 'lal', 'Lj1A1187G43' => 'lonja', 'Lj1A1205T50' => 'lonja', 'Lj1A800G33' => 'lonja', 'Lj1C1187T7' => 'lonja', 'Lj1C843T11' => 'lonja', 'Lj1g0010940' => 'lja', 'Lj2A288T69' => 'lonja', 'Lj3g0024276' => 'lja', 'Lj4A47T76' => 'lonja', 'Lj4g0005805' => 'lja', 'Lj4g0006097' => 'lja', 'Lj4g0008528' => 'lja', 'Lj4g0024907' => 'lja', 'Lj5g0012472' => 'lja', 'Lj5g0018648' => 'lja', 'Lj6C789G1' => 'lonja', 'Lj6g0004000' => 'lja', 'Lj7A292G67' => 'lonja', 'Lj7A292T64' => 'lonja', 'Lj9A400T58' => 'lonja', 'Lsat_1_v5_gn_1_126181' => 'lsa', 'Lsat_1_v5_gn_4_123041' => 'lsa', 'Lsat_1_v5_gn_4_133620' => 'lsa', 'Lsat_1_v5_gn_4_53221' => 'lsa', 'Lsat_1_v5_gn_4_71961' => 'lsa', 'Lsat_1_v5_gn_7_105241' => 'lsa', 'Lsat_1_v5_gn_7_21361' => 'lsa', 'Lsat_1_v5_gn_7_28860' => 'lsa', 'Lsat_1_v5_gn_7_31260' => 'lsa', 'Lsat_1_v5_gn_8_52801' => 'lsa', 'Manes.02G191400' => 'mes', 'Manes.03G110100' => 'mes', 'Manes.04G071100' => 'mes', 'Manes.05G100500' => 'mes', 'Manes.05G164700' => 'mes', 'Manes.15G087000' => 'mes', 'Manes.15G121500' => 'mes', 'Manes.16G028300' => 'mes', 'Manes.17G046100' => 'mes', 'Manes.17G069800' => 'mes', 'Manes.18G100500' => 'mes', 'Mapoly0002s0109' => 'mpo', 'Mapoly0024s0007' => 'mpo', 'Mapoly0089s0032' => 'mpo', 'MBI04_g42241_MAGBIO' => 'mbi', 'MBI05_g11988_MAGBIO' => 'mbi', 'MBI05_g35452_MAGBIO' => 'mbi', 'MBI07_g30179_MAGBIO' => 'mbi', 'MBI07_g35859_MAGBIO' => 'mbi', 'MBI07_g35860_MAGBIO' => 'mbi', 'MBI07_g37166_MAGBIO' => 'mbi', 'MBI08_g18172_MAGBIO' => 'mbi', 'MBI09_g08441_MAGBIO' => 'mbi', 'MBI13_g01676_MAGBIO' => 'mbi', 'MBI14_g42955_MAGBIO' => 'mbi', 'MBI16_g13161_MAGBIO' => 'mbi', 'MBI17_g27204_MAGBIO' => 'mbi', 'MBI19_g21595_MAGBIO' => 'mbi', 'MD00G1148400' => 'mdo', 'MD02G1301200' => 'mdo', 'MD03G1227800' => 'mdo', 'MD05G1041100' => 'mdo', 'MD05G1124800' => 'mdo', 'MD05G1284000' => 'mdo', 'MD05G1338800' => 'mdo', 'MD05G1338900' => 'mdo', 'MD07G1022800' => 'mdo', 'MD10G1047500' => 'mdo', 'MD10G1127500' => 'mdo', 'MD10G1262300' => 'mdo', 'MD10G1293800' => 'mdo', 'MD16G1074300' => 'mdo', 'Medtr1g021670' => 'mtr', 'Medtr1g096320' => 'mtr', 'Medtr2g013690' => 'mtr', 'Medtr2g019450' => 'mtr', 'Medtr2g085170' => 'mtr', 'Medtr4g088785' => 'mtr', 'Medtr8g055930' => 'mtr', 'Medtr8g085850' => 'mtr', 'MELO3C002605.2' => 'cme', 'MELO3C003891.2' => 'cme', 'MELO3C004012.2' => 'cme', 'MELO3C007134.2' => 'cme', 'MELO3C008118.2' => 'cme', 'MELO3C016700.2' => 'cme', 'MELO3C024127.2' => 'cme', 'MELO3C033361.2' => 'cme', 'MELO3C033362.2' => 'cme', 'Migut.C00430' => 'egut', 'Migut.C01246' => 'egut', 'Migut.E00101' => 'egut', 'Migut.H01486' => 'egut', 'Migut.H01939' => 'egut', 'Migut.K00360' => 'egut', 'Migut.M00910' => 'egut', 'Migut.M01139' => 'egut', 'Migut.N02677' => 'egut', 'MSTRG.13252' => 'ama', 'MSTRG.14701' => 'ama', 'MSTRG.1521' => 'ama', 'MSTRG.15884' => 'ama', 'MSTRG.16242' => 'ama', 'MSTRG.22285' => 'ama', 'MSTRG.22444' => 'ama', 'MSTRG.2349' => 'ama', 'MSTRG.26308' => 'ama', 'MSTRG.28296' => 'ama', 'MSTRG.9895' => 'ama', 'Nitab4.5_0000110g0060' => 'nta', 'Nitab4.5_0000420g0130' => 'nta', 'Nitab4.5_0000422g0030' => 'nta', 'Nitab4.5_0000560g0180' => 'nta', 'Nitab4.5_0000703g0100' => 'nta', 'Nitab4.5_0000786g0200' => 'nta', 'Nitab4.5_0001336g0020' => 'nta', 'Nitab4.5_0001796g0030' => 'nta', 'Nitab4.5_0003348g0060' => 'nta', 'Nitab4.5_0003698g0040' => 'nta', 'Nitab4.5_0003942g0090' => 'nta', 'Nitab4.5_0004775g0070' => 'nta', 'Nitab4.5_0004864g0030' => 'nta', 'Nitab4.5_0005615g0020' => 'nta', 'Nitab4.5_0009288g0030' => 'nta', 'Nitab4.5_0009341g0010' => 'nta', 'Nitab4.5_0009535g0010' => 'nta', 'Nn1g03995' => 'nnu', 'Nn1g04100' => 'nnu', 'Nn1g06530' => 'nnu', 'Nn3g16404' => 'nnu', 'Nn3g17212' => 'nnu', 'Nn3g20776' => 'nnu', 'Nn3g21923' => 'nnu', 'Nn5g27737' => 'nnu', 'Nn5g29461' => 'nnu', 'Nn7g38355' => 'nnu', 'Nn8g39873' => 'nnu', 'Oeu000548.2' => 'oeu', 'Oeu004672.1' => 'oeu', 'Oeu015605.2' => 'oeu', 'Oeu016092.1' => 'oeu', 'Oeu017879.3' => 'oeu', 'Oeu024910.1' => 'oeu', 'Oeu028965.1' => 'oeu', 'Oeu031269.1' => 'oeu', 'Oeu031270.1' => 'oeu', 'Oeu032535.1' => 'oeu', 'Oeu034151.1' => 'oeu', 'Oeu034152.1' => 'oeu', 'Oeu034588.2' => 'oeu', 'Oeu050846.1' => 'oeu', 'Oeu050849.2' => 'oeu', 'Oeu051063.2' => 'oeu', 'Oeu052368.1' => 'oeu', 'Oeu052370.1' => 'oeu', 'Os01g0210400' => 'osa', 'Os01g0304300' => 'osa', 'Os01g0749100' => 'osa', 'Os02g0745800' => 'osa', 'Os03g0769050' => 'osa', 'Os05g0531500' => 'osa', 'Os06g0724300' => 'osa', 'Os11g0198100' => 'osa', 'Peaxi162Scf00069g01425' => 'pax', 'Peaxi162Scf00280g00811' => 'pax', 'Peaxi162Scf00310g00615' => 'pax', 'Peaxi162Scf00362g00542' => 'pax', 'Peaxi162Scf00461g00310' => 'pax', 'Peaxi162Scf00530g00118' => 'pax', 'Peaxi162Scf00541g00057' => 'pax', 'Peaxi162Scf00661g00017' => 'pax', 'Peaxi162Scf00926g00027' => 'pax', 'Peaxi162Scf01064g00263' => 'pax', 'Peaxi162Scf01211g00135' => 'pax', 'PGR004G2336' => 'pgr', 'PGR042G0327' => 'pgr', 'PGR042G1957' => 'pgr', 'PGR042G2003' => 'pgr', 'PGR042G3929' => 'pgr', 'PGR083G1137' => 'pgr', 'PGR083G1364' => 'pgr', 'PGSC0003DMG400003381' => 'stu', 'PGSC0003DMG400003417' => 'stu', 'PGSC0003DMG400008981' => 'stu', 'PGSC0003DMG400012417' => 'stu', 'PGSC0003DMG400012823' => 'stu', 'PGSC0003DMG400016885' => 'stu', 'PGSC0003DMG400022812' => 'stu', 'PGSC0003DMG400029726' => 'stu', 'PGSC0003DMG401009243' => 'stu', 'PGSC0003DMG401031505' => 'stu', 'PGSC0003DMG402031505' => 'stu', 'Phvul.001G017600' => 'pvu', 'Phvul.002G193500' => 'pvu', 'Phvul.002G228900' => 'pvu', 'Phvul.002G236800' => 'pvu', 'Phvul.003G049500' => 'pvu', 'Phvul.005G072000' => 'pvu', 'Phvul.006G164800' => 'pvu', 'Phvul.006G185100' => 'pvu', 'Phvul.007G090000' => 'pvu', 'Potri.001G399800' => 'ptr', 'Potri.002G149900' => 'ptr', 'Potri.004G044100' => 'ptr', 'Potri.004G177600' => 'ptr', 'Potri.009G138000' => 'ptr', 'Potri.010G094000' => 'ptr', 'Potri.011G053000' => 'ptr', 'Potri.011G119300' => 'ptr', 'Potri.013G113700' => 'ptr', 'Potri.018G107800' => 'ptr', 'Potri.019G084100' => 'ptr', 'Pp3c14_23720' => 'ppa', 'Pp3c16_6340' => 'ppa', 'Pp3c23_13420' => 'ppa', 'Pp3c24_2740' => 'ppa', 'Pp3c25_860' => 'ppa', 'Pp3c8_21750' => 'ppa', 'Prupe.1G273000' => 'ppe', 'Prupe.1G273700' => 'ppe', 'Prupe.1G274100' => 'ppe', 'Prupe.2G023300' => 'ppe', 'Prupe.4G048000' => 'ppe', 'Prupe.4G080400' => 'ppe', 'Prupe.4G181200' => 'ppe', 'Prupe.8G056900' => 'ppe', 'Prupe.8G168700' => 'ppe', 'Psat1g189080' => 'psa', 'Psat1g204760' => 'psa', 'Psat4g175560' => 'psa', 'Psat4g177720' => 'psa', 'Psat5g244240' => 'psa', 'Psat6g010720' => 'psa', 'Psat6g187200' => 'psa', 'Psat7g072040' => 'psa', 'PSO017G3501' => 'pso', 'PSO063G2148' => 'pso', 'PSO063G5608' => 'pso', 'PSO210G6392' => 'pso', 'PSO541G2319' => 'pso', 'PSO541G2836' => 'pso', 'PSO541G4012' => 'pso', 'PSO541G6253' => 'pso', 'PSO675G0580' => 'pso', 'PSO675G0856' => 'pso', 'PSO675G5635' => 'pso', 'PSO675G9157' => 'pso', 'PSO832G1660' => 'pso', 'PSO832G1969' => 'pso', 'QL02p007186' => 'qlo', 'QL02p033904' => 'qlo', 'QL03p064391' => 'qlo', 'QL05p040593' => 'qlo', 'QL05p058242' => 'qlo', 'QL08p021825' => 'qlo', 'QL11p004981' => 'qlo', 'RcHm_v2.0_Chr1g0318301' => 'rch', 'RcHm_v2.0_Chr4g0418501' => 'rch', 'RcHm_v2.0_Chr4g0439971' => 'rch', 'RcHm_v2.0_Chr5g0008541' => 'rch', 'RcHm_v2.0_Chr5g0014101' => 'rch', 'RcHm_v2.0_Chr5g0014131' => 'rch', 'RcHm_v2.0_Chr5g0033621' => 'rch', 'RcHm_v2.0_Chr6g0272041' => 'rch', 'RcHm_v2.0_Chr6g0278831' => 'rch', 'Rhsim02G0130400' => 'rsi', 'Rhsim02G0171100' => 'rsi', 'Rhsim05G0053000' => 'rsi', 'Rhsim05G0053100' => 'rsi', 'Rhsim06G0096500' => 'rsi', 'Rhsim06G0096600' => 'rsi', 'Rhsim06G0199100' => 'rsi', 'Rhsim12G0062300' => 'rsi', 'Rhsim12G0062800' => 'rsi', 'Sabra02G0118600' => 'sbr', 'Sabra04G0027300' => 'sbr', 'Sabra04G0119500' => 'sbr', 'Sabra08G0112500' => 'sbr', 'Sabra11G0036800' => 'sbr', 'Sabra11G0103800' => 'sbr', 'Sabra13G0096300' => 'sbr', 'Sabra16G0262300' => 'sbr', 'Sabra18G0091700' => 'sbr', 'Sabra19G0095400' => 'sbr', 'SalBow6G3080' => 'sbo', 'SalBow7G1157' => 'sbo', 'SalBow7G2123' => 'sbo', 'SalBow7G2285' => 'sbo', 'SalBow7G3537' => 'sbo', 'SalBow8G2947' => 'sbo', 'SalBow8G4463' => 'sbo', 'SalBow8G5466' => 'sbo', 'Sc01g0001750' => 'sci', 'Sc02g0006640' => 'sci', 'Sc02g0006670' => 'sci', 'Sc04g0008220' => 'sci', 'Sc05g0006190' => 'sci', 'Sc08g0002760' => 'sci', 'Sc17g0006170' => 'sci', 'Sc22g0002050' => 'sci', 'Sc23g0001190' => 'sci', 'Sc24g0000980' => 'sci', 'Sed0006245' => 'sed', 'Sed0007543' => 'sed', 'Sed0009411' => 'sed', 'Sed0010765' => 'sed', 'Sed0012944' => 'sed', 'Sed0014682' => 'sed', 'Sed0016174' => 'sed', 'Sed0016796' => 'sed', 'Sed0020317' => 'sed', 'Sed0021467' => 'sed', 'SEGI_01316' => 'sgi', 'SEGI_03374' => 'sgi', 'SEGI_16265' => 'sgi', 'SEGI_18569' => 'sgi', 'SEGI_20351' => 'sgi', 'SEGI_26395' => 'sgi', 'SEGI_29469' => 'sgi', 'SEGI_34771' => 'sgi', 'SEGI_36769' => 'sgi', 'SEGI_37139' => 'sgi', 'SGA_v2.0_scaffold100G29687' => 'sas', 'SGA_v2.0_scaffold118G32472' => 'sas', 'SGA_v2.0_scaffold14G07051' => 'sas', 'SGA_v2.0_scaffold183G39845' => 'sas', 'SGA_v2.0_scaffold1G00174' => 'sas', 'SGA_v2.0_scaffold22G09714' => 'sas', 'SGA_v2.0_scaffold333G48992' => 'sas', 'SGA_v2.0_scaffold46G17491' => 'sas', 'SGA_v2.0_scaffold49G18294' => 'sas', 'SGA_v2.0_scaffold63G21658' => 'sas', 'SHI01741' => 'shi', 'SHI05771' => 'shi', 'SHI18077' => 'shi', 'SHI20525' => 'shi', 'SHI20527' => 'shi', 'SHI20528' => 'shi', 'SMO172G0185' => 'smo', 'SMO198G0020' => 'smo', 'SMO351G0006' => 'smo', 'SMO356G0118' => 'smo', 'SMO358G0296' => 'smo', 'SMO367G0079' => 'smo', 'SMO367G1277' => 'smo', 'Solyc01g014220.3' => 'sly', 'Solyc01g111770.2' => 'sly', 'Solyc02g078180.3' => 'sly', 'Solyc03g006430.3' => 'sly', 'Solyc03g006456.1' => 'sly', 'Solyc03g079860.2' => 'sly', 'Solyc04g079770.3' => 'sly', 'Solyc05g007430.4' => 'sly', 'Solyc07g063150.3' => 'sly', 'Solyc08g016620.3' => 'sly', 'Solyc09g057590.3' => 'sly', 'Solyc09g057600.1' => 'sly', 'Solyc10g009050.3' => 'sly', 'Solyc11g017420.2' => 'sly', 'Sopen01g053810' => 'spe', 'Sopen02g023040' => 'spe', 'Sopen03g002440' => 'spe', 'Sopen04g033350' => 'spe', 'Sopen05g003310' => 'spe', 'Sopen07g004050' => 'spe', 'Sopen07g031340' => 'spe', 'Sopen08g006990' => 'spe', 'Sopen10g004830' => 'spe', 'Sopen11g009370' => 'spe', 'Sp1g24450' => 'spa', 'Sp1g29670' => 'spa', 'Sp1g39600' => 'spa', 'Sp2g11080' => 'spa', 'Sp2g13970' => 'spa', 'Sp4g16130' => 'spa', 'Sp6g13080' => 'spa', 'Sp7g37270' => 'spa', 'TAR371G0065' => 'tar', 'TAR376G0340' => 'tar', 'TAR376G0435' => 'tar', 'TAR381G0002' => 'tar', 'TAR381G1236' => 'tar', 'TAR624G0055' => 'tar', 'TAR624G0324' => 'tar', 'TAR624G0696' => 'tar', 'TAR624G0906' => 'tar', 'TAR625G0107' => 'tar', 'TAR626G0015' => 'tar', 'TAR626G1356' => 'tar', 'TAR627G0888' => 'tar', 'TAR628G0399' => 'tar', 'TAR628G1327' => 'tar', 'TAR629G2831' => 'tar', 'TAR629G2874' => 'tar', 'TAR633G1432' => 'tar', 'TAR633G2771' => 'tar', 'THA.LOC104803394' => 'tha', 'THA.LOC104805153' => 'tha', 'THA.LOC104806784' => 'tha', 'THA.LOC104810473' => 'tha', 'THA.LOC104813100' => 'tha', 'THA.LOC104814215' => 'tha', 'THA.LOC104815554' => 'tha', 'THA.LOC104820544' => 'tha', 'THA.LOC104824754' => 'tha', 'THA.LOC104827717' => 'tha', 'Thecc.02G031400' => 'tca', 'Thecc.02G055900' => 'tca', 'Thecc.02G350800' => 'tca', 'Thecc.06G150900' => 'tca', 'Thecc.06G186600' => 'tca', 'Thecc.07G089600' => 'tca', 'Thecc.08G020400' => 'tca', 'Thecc.08G182100' => 'tca', 'Thhalv10000873m.g' => 'esa', 'Thhalv10004185m.g' => 'esa', 'Thhalv10006981m.g' => 'esa', 'Thhalv10007204m.g' => 'esa', 'Thhalv10011374m.g' => 'esa', 'Thhalv10013482m.g' => 'esa', 'Thhalv10017801m.g' => 'esa', 'Thhalv10024983m.g' => 'esa', 'TPR.G12072' => 'tpr', 'TPR.G15769' => 'tpr', 'TPR.G16504' => 'tpr', 'TPR.G16506' => 'tpr', 'TPR.G24345' => 'tpr', 'TPR.G26666' => 'tpr', 'TPR.G27320' => 'tpr', 'TPR.G31819' => 'tpr', 'TPR.G38879' => 'tpr', 'TPR.G39015' => 'tpr', 'TPR.G8819' => 'tpr', 'TWI09G0924' => 'twi', 'TWI12G0811' => 'twi', 'TWI12G1294' => 'twi', 'TWI31G0150' => 'twi', 'TWI36G1262' => 'twi', 'TWI38G1287' => 'twi', 'TWI38G1633' => 'twi', 'TWI38G1982' => 'twi', 'TWI39G0116' => 'twi', 'TWI60G1011' => 'twi', 'TWI63G0171' => 'twi', 'TWI73G0839' => 'twi', 'TWI79G1511' => 'twi', 'unitig_0.g915' => 'ugi', 'unitig_0.g916' => 'ugi', 'unitig_21.g20219' => 'ugi', 'unitig_21.g20416' => 'ugi', 'unitig_578.g16132' => 'ugi', 'unitig_578.g16718' => 'ugi', 'unitig_62.g23481' => 'ugi', 'unitig_744.g24535' => 'ugi', 'unitig_749.g13525' => 'ugi', 'vmacro01248' => 'vma', 'vmacro02290' => 'vma', 'vmacro10946' => 'vma', 'vmacro11865' => 'vma', 'vmacro12493' => 'vma', 'vmacro17322' => 'vma', 'vmacro21599' => 'vma', 'vmacro23041' => 'vma', 'VMungo0251G0004' => 'vmu', 'VMungo0251G2639' => 'vmu', 'VMungo0251G2967' => 'vmu', 'VMungo0540G0864' => 'vmu', 'VMungo0540G1569' => 'vmu', 'VMungo0647G0317' => 'vmu', 'VMungo0720G1373' => 'vmu', 'VMungo0720G1508' => 'vmu', 'VMungo1080G0485' => 'vmu', 'VMungo1215G3177' => 'vmu', 'Zm00001eb112600' => 'zma', 'Zm00001eb120220' => 'zma', 'Zm00001eb153240' => 'zma', 'Zm00001eb168880' => 'zma', 'Zm00001eb213920' => 'zma', 'Zm00001eb228280' => 'zma', 'Zm00001eb254580' => 'zma', 'Zm00001eb272180' => 'zma', 'Zm00001eb293190' => 'zma', 'Zm00001eb322930' => 'zma', 'Zm00001eb353360' => 'zma', 'Zm00001eb353390' => 'zma', 'Zm00001eb353430' => 'zma', 'Zm00001eb353440' => 'zma', 'Zm00001eb353780' => 'zma' ), 'gf_id' => 'HOM05D000499', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000499' ), 'data_identifier' => 'HOM05D000499', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000499', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1066', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p29780' => 'bna', 'A02p33180' => 'bna', 'A03p16470' => 'bna', 'A03p66010' => 'bna', 'A04p25970' => 'bna', 'A06p01270' => 'bna', 'A06p46080' => 'bna', 'A07p11400' => 'bna', 'A08p01840' => 'bna', 'A08p08230' => 'bna', 'A08p25740' => 'bna', 'A09p32070' => 'bna', 'A09p37830' => 'bna', 'A09p42840' => 'bna', 'A09p42850' => 'bna', 'Aa31LG10G2060' => 'aar', 'Aa31LG2G7410' => 'aar', 'Aa31LG6G10200' => 'aar', 'Aa31LG6G16680' => 'aar', 'Aa31LG6G8470' => 'aar', 'Aa31LG9G12730' => 'aar', 'Aa31LG9G13680' => 'aar', 'Aa31LG9G14920' => 'aar', 'Aa31LG9G6650' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4977' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5467' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3254' => 'aag', 'Actinidia02578' => 'ach', 'Actinidia07693' => 'ach', 'Actinidia08413' => 'ach', 'Actinidia08414' => 'ach', 'Actinidia15289' => 'ach', 'Actinidia19871' => 'ach', 'Actinidia21475' => 'ach', 'Actinidia22576' => 'ach', 'Actinidia28327' => 'ach', 'Actinidia32491' => 'ach', 'Actinidia39463' => 'ach', 'Actinidia39571' => 'ach', 'Ah.01g013750' => 'amhyb', 'Ah.01g023210' => 'amhyb', 'Ah.04g164850' => 'amhyb', 'Ah.05g178060' => 'amhyb', 'Ah.07g204270' => 'amhyb', 'Ah.07g208480' => 'amhyb', 'Ah.09g237410' => 'amhyb', 'Ah.14g089460' => 'amhyb', 'AL1G41790' => 'aly', 'AL1G49050' => 'aly', 'AL1G53810' => 'aly', 'AL1G61400' => 'aly', 'AL4G18580' => 'aly', 'AL5G12510' => 'aly', 'AL5G12540' => 'aly', 'AL6G43230' => 'aly', 'AL7G10370' => 'aly', 'AL7G19250' => 'aly', 'AL8G12240' => 'aly', 'AL8G18540' => 'aly', 'Aqoxy1G02409' => 'aox', 'Aqoxy2G03993' => 'aox', 'Aqoxy3G03357' => 'aox', 'Aqoxy4G00785' => 'aox', 'Aqoxy5G02598' => 'aox', 'Aqoxy6G00132' => 'aox', 'Aqoxy7G01776' => 'aox', 'Aqoxy7G02316' => 'aox', 'Aqoxy7G03973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.12AFKW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B8730' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27IQR1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3F75VG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3RE0GA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41TCQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.527VTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FIR39' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5W8UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DA38EV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ63HS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H1I32C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HC27T5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4M8AP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7N3CZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9UVDZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LS1NQA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT1D4B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SKC4TM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCFV76' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF9Q1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQWD9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1ZM88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WE07RT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YCK7VH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJE6Q6' => 'arhy', 'AT1G28240' => 'ath', 'AT1G34550' => 'ath', 'AT1G53040' => 'ath', 'AT2G02910' => 'ath', 'AT4G09630' => 'ath', 'AT4G38500' => 'ath', 'AT5G42660' => 'ath', 'AT5G46220' => 'ath', 'ATR0152G026' => 'atr', 'ATR0564G343' => 'atr', 'ATR0706G151' => 'atr', 'ATR0733G207' => 'atr', 'ATR0751G234' => 'atr', 'ATR0807G048' => 'atr', 'ATR1091G084' => 'atr', 'Atru.chr10.1229' => 'acertr', 'Atru.chr10.1230' => 'acertr', 'Atru.chr10.1874' => 'acertr', 'Atru.chr11.1808' => 'acertr', 'Atru.chr13.1795' => 'acertr', 'Atru.chr13.570' => 'acertr', 'Atru.chr2.2608' => 'acertr', 'Atru.chr2.2609' => 'acertr', 'Atru.chr5.3428' => 'acertr', 'Atru.chr8.1171' => 'acertr', 'AUR62004651' => 'cqu', 'AUR62008675' => 'cqu', 'AUR62010014' => 'cqu', 'AUR62013004' => 'cqu', 'AUR62014825' => 'cqu', 'AUR62015015' => 'cqu', 'AUR62015151' => 'cqu', 'AUR62017020' => 'cqu', 'AUR62019422' => 'cqu', 'AUR62023570' => 'cqu', 'AUR62025571' => 'cqu', 'AUR62029098' => 'cqu', 'AUR62033863' => 'cqu', 'AUR62034296' => 'cqu', 'AUR62040075' => 'cqu', 'BcaB02g07334' => 'bca', 'BcaB02g10575' => 'bca', 'BcaB03g12119' => 'bca', 'BcaB03g12120' => 'bca', 'BcaB03g13945' => 'bca', 'BcaB04g17123' => 'bca', 'BcaB04g17867' => 'bca', 'BcaB04g19839' => 'bca', 'BcaB07g30317' => 'bca', 'BcaB07g32432' => 'bca', 'BcaB07g33362' => 'bca', 'BcaB08g36611' => 'bca', 'BcaC01g00028' => 'bca', 'BcaC01g01356' => 'bca', 'BcaC01g02034' => 'bca', 'BcaC01g06051' => 'bca', 'BcaC03g16839' => 'bca', 'BcaC03g17176' => 'bca', 'BcaC05g26829' => 'bca', 'BcaC06g31490' => 'bca', 'BcaC06g35344' => 'bca', 'BcaC06g36570' => 'bca', 'BcaC07g37537' => 'bca', 'BcaC08g43491' => 'bca', 'BcaC08g43773' => 'bca', 'BcaNung00234' => 'bca', 'BcaNung01982' => 'bca', 'BcaNung03707' => 'bca', 'BcaNung06454' => 'bca', 'BolC2t10762H' => 'bol', 'BolC2t11191H' => 'bol', 'BolC3t14322H' => 'bol', 'BolC3t19747H' => 'bol', 'BolC3t21425H' => 'bol', 'BolC4t27800H' => 'bol', 'BolC5t31423H' => 'bol', 'BolC6t35951H' => 'bol', 'BolC6t36282H' => 'bol', 'BolC7t40678H' => 'bol', 'BolC7t40679H' => 'bol', 'BolC7t42222H' => 'bol', 'BolC7t43492H' => 'bol', 'BolC7t46785H' => 'bol', 'BolC8t47853H' => 'bol', 'BolC9t56805H' => 'bol', 'BraA02t08000Z' => 'bra', 'BraA02t08341Z' => 'bra', 'BraA03t10936Z' => 'bra', 'BraA03t15657Z' => 'bra', 'BraA04t18100Z' => 'bra', 'BraA05t20523Z' => 'bra', 'BraA06t23353Z' => 'bra', 'BraA06t27473Z' => 'bra', 'BraA06t27769Z' => 'bra', 'BraA07t28928Z' => 'bra', 'BraA08t32236Z' => 'bra', 'BraA08t32841Z' => 'bra', 'BraA08t34524Z' => 'bra', 'BraA09t38742Z' => 'bra', 'BraA09t39295Z' => 'bra', 'C02p47180' => 'bna', 'C02p50990' => 'bna', 'C03p19360' => 'bna', 'C03p74950' => 'bna', 'C03p91000' => 'bna', 'C04p63260' => 'bna', 'C05p27050' => 'bna', 'C06p08750' => 'bna', 'C06p11490' => 'bna', 'C07p02820' => 'bna', 'C07p17180' => 'bna', 'C07p29440' => 'bna', 'C07p63730' => 'bna', 'C09p39260' => 'bna', 'CAN.G1164.34' => 'can', 'CAN.G1164.39' => 'can', 'CAN.G1530.3' => 'can', 'CAN.G162.61' => 'can', 'CAN.G176.6' => 'can', 'CAN.G289.49' => 'can', 'CAN.G370.21' => 'can', 'CAN.G370.22' => 'can', 'CAN.G371.117' => 'can', 'CAN.G58.37' => 'can', 'CAN.G588.98' => 'can', 'CANSAT21G2266' => 'cansat', 'CANSAT25G2799' => 'cansat', 'CANSAT35G0862' => 'cansat', 'CANSAT35G1704' => 'cansat', 'CANSAT35G1760' => 'cansat', 'CANSAT56G3971' => 'cansat', 'CANSAT56G4116' => 'cansat', 'CANSAT80G1259' => 'cansat', 'CARHR027730' => 'chi', 'CARHR033880' => 'chi', 'CARHR043270' => 'chi', 'CARHR145330' => 'chi', 'CARHR145340' => 'chi', 'CARHR175570' => 'chi', 'CARHR181570' => 'chi', 'CARHR258470' => 'chi', 'CARHR260490' => 'chi', 'CARHR294220' => 'chi', 'Carub.0001s2668' => 'cru', 'Carub.0001s3257' => 'cru', 'Carub.0001s4220' => 'cru', 'Carub.0005s0179' => 'cru', 'Carub.0006s2807' => 'cru', 'Carub.0007s0039' => 'cru', 'Carub.0008s0169' => 'cru', 'Carub.0008s0636' => 'cru', 'Ca_00338_v3' => 'car', 'Ca_00542_v3' => 'car', 'Ca_01844_v3' => 'car', 'Ca_10611_v3' => 'car', 'Ca_13326_v3' => 'car', 'Ca_17944_v3' => 'car', 'Ca_18546_v3' => 'car', 'Ca_24219_v3' => 'car', 'Ca_29972_v3' => 'car', 'CBR_g3681' => 'cbr', 'CBR_g40021' => 'cbr', 'Cc01_g08140' => 'ccan', 'Cc02_g13410' => 'ccan', 'Cc02_g37480' => 'ccan', 'Cc05_g12030' => 'ccan', 'Cc09_g03370' => 'ccan', 'Cc09_g10300' => 'ccan', 'Cc10_g03530' => 'ccan', 'Cc10_g11380' => 'ccan', 'CDE01G0176' => 'cde', 'CDE02G0675' => 'cde', 'CDE02G0942' => 'cde', 'CDE02G1153' => 'cde', 'CDE02G4177' => 'cde', 'CDE04G2117' => 'cde', 'CDE04G2736' => 'cde', 'CDE08G1161' => 'cde', 'CDE09G1238' => 'cde', 'Cfa000467' => 'cfa', 'Cfa000947' => 'cfa', 'Cfa004969' => 'cfa', 'Cfa005284' => 'cfa', 'Cfa008993' => 'cfa', 'Cfa018187' => 'cfa', 'Cfa018454' => 'cfa', 'Cfa020585' => 'cfa', 'Ciclev10000424m.g' => 'ccl', 'Ciclev10003605m.g' => 'ccl', 'Ciclev10007828m.g' => 'ccl', 'Ciclev10014620m.g' => 'ccl', 'Ciclev10015169m.g' => 'ccl', 'Ciclev10018291m.g' => 'ccl', 'Ciclev10028256m.g' => 'ccl', 'Ciclev10033822m.g' => 'ccl', 'CiPaw.05G060300' => 'cil', 'CiPaw.05G085000' => 'cil', 'CiPaw.06G083700' => 'cil', 'CiPaw.06G120300' => 'cil', 'CiPaw.09G060500' => 'cil', 'CiPaw.09G123800' => 'cil', 'CiPaw.11G169700' => 'cil', 'CiPaw.12G118300' => 'cil', 'CiPaw.15G071000' => 'cil', 'CiPaw.15G081900' => 'cil', 'ClCG01G024610' => 'cla', 'ClCG03G006070' => 'cla', 'ClCG05G019250' => 'cla', 'ClCG09G009500' => 'cla', 'ClCG11G008200' => 'cla', 'ClCG11G018080' => 'cla', 'COL.COLO4_17373' => 'col', 'COL.COLO4_22994' => 'col', 'COL.COLO4_26389' => 'col', 'COL.COLO4_27170' => 'col', 'COL.COLO4_31074' => 'col', 'COL.COLO4_31465' => 'col', 'COL.COLO4_36438' => 'col', 'COL.COLO4_36439' => 'col', 'Cpa.g.c38781' => 'cpa', 'Cpa.g.sc128.12' => 'cpa', 'Cpa.g.sc166.7' => 'cpa', 'Cpa.g.sc166.8' => 'cpa', 'Cpa.g.sc20.111' => 'cpa', 'Cpa.g.sc27.31' => 'cpa', 'Cpa.g.sc64.36' => 'cpa', 'Cpa.g.sc64.37' => 'cpa', 'Cpa.g.sc66.49' => 'cpa', 'Cpa.g.sc80.64' => 'cpa', 'CsaV3_1G012320' => 'csa', 'CsaV3_2G008480' => 'csa', 'CsaV3_2G033450' => 'csa', 'CsaV3_3G044830' => 'csa', 'CsaV3_4G033710' => 'csa', 'CsaV3_6G051730' => 'csa', 'CsaV3_7G025350' => 'csa', 'CSS0001067' => 'camsi', 'CSS0005996' => 'camsi', 'CSS0006590' => 'camsi', 'CSS0009673' => 'camsi', 'CSS0010201' => 'camsi', 'CSS0010549' => 'camsi', 'CSS0011364' => 'camsi', 'CSS0014473' => 'camsi', 'CSS0014961' => 'camsi', 'CSS0020191' => 'camsi', 'CSS0021165' => 'camsi', 'CSS0022306' => 'camsi', 'CSS0030591' => 'camsi', 'CSS0030696' => 'camsi', 'CSS0032653' => 'camsi', 'CSS0037487' => 'camsi', 'CSS0041102' => 'camsi', 'CSS0041261' => 'camsi', 'CSS0046246' => 'camsi', 'CSS0049256' => 'camsi', 'DCAR_004075' => 'dca', 'DCAR_011538' => 'dca', 'DCAR_019553' => 'dca', 'DCAR_020952' => 'dca', 'DCAR_021739' => 'dca', 'DCAR_027407' => 'dca', 'DCAR_027913' => 'dca', 'DCAR_028066' => 'dca', 'Dinv05899' => 'din', 'Dinv07563' => 'din', 'Dinv08010' => 'din', 'Dinv14125' => 'din', 'Dinv20172' => 'din', 'Dinv30743' => 'din', 'Dinv31229' => 'din', 'Dinv34162' => 'din', 'Dinv36028' => 'din', 'Dinv39368' => 'din', 'Dinv40565' => 'din', 'Dinv41706' => 'din', 'Duzib052G0089' => 'dzi', 'Duzib116G0641' => 'dzi', 'Duzib132G0069' => 'dzi', 'Duzib132G1219' => 'dzi', 'Duzib147G0278' => 'dzi', 'Duzib160G0480' => 'dzi', 'Duzib170G0661' => 'dzi', 'Duzib177G0591' => 'dzi', 'Duzib187G1353' => 'dzi', 'Duzib192G0858' => 'dzi', 'Duzib192G0883' => 'dzi', 'Duzib213G0506' => 'dzi', 'Duzib235G0289' => 'dzi', 'Duzib251G0422' => 'dzi', 'ECA232G3898' => 'eca', 'ECA233G5950' => 'eca', 'ECA234G1699' => 'eca', 'ECA234G2421' => 'eca', 'ECA236G0426' => 'eca', 'ECA236G4331' => 'eca', 'ECA248G2573' => 'eca', 'EL10Ac1g00077' => 'bvu', 'EL10Ac1g01746' => 'bvu', 'EL10Ac2g03464' => 'bvu', 'EL10Ac4g08176' => 'bvu', 'EL10Ac7g17521' => 'bvu', 'EL10Ac8g20386' => 'bvu', 'EL10Ac9g21343' => 'bvu', 'EL10Ac9g22688' => 'bvu', 'Eucgr.B03434' => 'egr', 'Eucgr.D00618' => 'egr', 'Eucgr.E02395' => 'egr', 'Eucgr.F01129' => 'egr', 'Eucgr.F02622' => 'egr', 'Eucgr.F04207' => 'egr', 'FAN01G0570' => 'fan', 'FAN03G3351' => 'fan', 'FAN06G3702' => 'fan', 'FAN07G2149' => 'fan', 'FAN10G3758' => 'fan', 'FAN11G1170' => 'fan', 'FAN11G2050' => 'fan', 'FAN11G2724' => 'fan', 'FAN12G1700' => 'fan', 'FAN12G2028' => 'fan', 'FAN15G1160' => 'fan', 'FAN15G3063' => 'fan', 'FAN16G2540' => 'fan', 'FAN16G3077' => 'fan', 'FAN16G3624' => 'fan', 'FAN17G0221' => 'fan', 'FAN20G2492' => 'fan', 'FAN20G2905' => 'fan', 'FAN21G0548' => 'fan', 'FAN21G1300' => 'fan', 'FAN22G0077' => 'fan', 'FAN22G1315' => 'fan', 'FAN24G1280' => 'fan', 'FAN24G1445' => 'fan', 'FAN24G3527' => 'fan', 'FAN25G0464' => 'fan', 'FAN25G2885' => 'fan', 'FAN25G3270' => 'fan', 'FAN27G1101' => 'fan', 'FAN27G2846' => 'fan', 'FAN27G3524' => 'fan', 'FvH4_2g11770' => 'fve', 'FvH4_2g15630' => 'fve', 'FvH4_3g05570' => 'fve', 'FvH4_3g09110' => 'fve', 'FvH4_3g19940' => 'fve', 'FvH4_4g04821' => 'fve', 'FvH4_4g31480' => 'fve', 'FvH4_7g01740' => 'fve', 'Glyma.05G130400' => 'gma', 'Glyma.05G156400' => 'gma', 'Glyma.07G197000' => 'gma', 'Glyma.08G085151' => 'gma', 'Glyma.08G114500' => 'gma', 'Glyma.08G300400' => 'gma', 'Glyma.10G215800' => 'gma', 'Glyma.12G224400' => 'gma', 'Glyma.13G179300' => 'gma', 'Glyma.13G218151' => 'gma', 'Glyma.13G238800' => 'gma', 'Glyma.13G276900' => 'gma', 'Glyma.14G078200' => 'gma', 'Glyma.15G074500' => 'gma', 'Glyma.15G094100' => 'gma', 'Glyma.17G247200' => 'gma', 'Glyma.18G120100' => 'gma', 'Glyma.20G176000' => 'gma', 'Gohir.A01G063600' => 'ghi', 'Gohir.A01G170301' => 'ghi', 'Gohir.A02G060500' => 'ghi', 'Gohir.A05G133850' => 'ghi', 'Gohir.A05G161400' => 'ghi', 'Gohir.A06G012900' => 'ghi', 'Gohir.A06G035901' => 'ghi', 'Gohir.A06G127100' => 'ghi', 'Gohir.A06G210500' => 'ghi', 'Gohir.A08G008650' => 'ghi', 'Gohir.A09G072700' => 'ghi', 'Gohir.A09G088301' => 'ghi', 'Gohir.A10G040600' => 'ghi', 'Gohir.A12G036300' => 'ghi', 'Gohir.A12G143350' => 'ghi', 'Gohir.A12G165500' => 'ghi', 'Gohir.A13G145700' => 'ghi', 'Gohir.D01G050000' => 'ghi', 'Gohir.D01G051366' => 'ghi', 'Gohir.D01G161350' => 'ghi', 'Gohir.D02G065900' => 'ghi', 'Gohir.D05G164200' => 'ghi', 'Gohir.D05G355500' => 'ghi', 'Gohir.D06G010400' => 'ghi', 'Gohir.D06G111250' => 'ghi', 'Gohir.D06G132000' => 'ghi', 'Gohir.D06G210500' => 'ghi', 'Gohir.D07G165675' => 'ghi', 'Gohir.D08G062240' => 'ghi', 'Gohir.D08G086101' => 'ghi', 'Gohir.D08G138060' => 'ghi', 'Gohir.D09G072300' => 'ghi', 'Gohir.D10G041400' => 'ghi', 'Gohir.D11G191020' => 'ghi', 'Gohir.D11G212066' => 'ghi', 'Gohir.D12G036300' => 'ghi', 'Gohir.D12G168600' => 'ghi', 'Gohir.D13G150600' => 'ghi', 'Gorai.001G057300' => 'gra', 'Gorai.002G069900' => 'gra', 'Gorai.002G200000' => 'gra', 'Gorai.003G067600' => 'gra', 'Gorai.005G074800' => 'gra', 'Gorai.006G087300' => 'gra', 'Gorai.008G037500' => 'gra', 'Gorai.008G181400' => 'gra', 'Gorai.009G169400' => 'gra', 'Gorai.009G387900' => 'gra', 'Gorai.010G013300' => 'gra', 'Gorai.010G153800' => 'gra', 'Gorai.010G255800' => 'gra', 'Gorai.011G043700' => 'gra', 'Gorai.011G198900' => 'gra', 'Gorai.013G168400' => 'gra', 'GSVIVG01005212001' => 'vvi', 'GSVIVG01006163001' => 'vvi', 'GSVIVG01009625001' => 'vvi', 'GSVIVG01014338001' => 'vvi', 'GSVIVG01020005001' => 'vvi', 'GSVIVG01021450001' => 'vvi', 'GSVIVG01023975001' => 'vvi', 'GSVIVG01034490001' => 'vvi', 'HanXRQChr04g0112071' => 'han', 'HanXRQChr05g0131151' => 'han', 'HanXRQChr09g0262371' => 'han', 'HanXRQChr09g0268401' => 'han', 'HanXRQChr10g0279241' => 'han', 'HanXRQChr10g0297961' => 'han', 'HanXRQChr11g0326231' => 'han', 'HanXRQChr11g0328471' => 'han', 'HanXRQChr16g0507941' => 'han', 'HanXRQChr17g0560211' => 'han', 'Haze_02108' => 'cav', 'Haze_02428' => 'cav', 'Haze_05593' => 'cav', 'Haze_06448' => 'cav', 'Haze_09427' => 'cav', 'Haze_12022' => 'cav', 'Haze_17612' => 'cav', 'Haze_17928' => 'cav', 'Hma1.2p1_0032F.1_g019250' => 'hma', 'Hma1.2p1_0163F.1_g072690' => 'hma', 'Hma1.2p1_0265F.1_g106710' => 'hma', 'Hma1.2p1_0286F.1_g113970' => 'hma', 'Hma1.2p1_0363F.1_g136640' => 'hma', 'Hma1.2p1_0584F.1_g183470' => 'hma', 'Hma1.2p1_0885F.1_g232570' => 'hma', 'HPP92_006022' => 'vpl', 'HPP92_007320' => 'vpl', 'HPP92_011521' => 'vpl', 'HPP92_019387' => 'vpl', 'HPP92_024038' => 'vpl', 'Hund05891' => 'sun', 'Hund06450' => 'sun', 'Hund12053' => 'sun', 'Hund16800' => 'sun', 'Hund21222' => 'sun', 'Hund22896' => 'sun', 'Hund23746' => 'sun', 'Hund27083' => 'sun', 'Lalb_Chr02g0141831' => 'lal', 'Lalb_Chr02g0141841' => 'lal', 'Lalb_Chr05g0220411' => 'lal', 'Lalb_Chr06g0162081' => 'lal', 'Lalb_Chr09g0327651' => 'lal', 'Lalb_Chr13g0295051' => 'lal', 'Lalb_Chr15g0086801' => 'lal', 'Lalb_Chr16g0383781' => 'lal', 'Lalb_Chr16g0383791' => 'lal', 'Lalb_Chr18g0055441' => 'lal', 'Lalb_Chr18g0059611' => 'lal', 'Lalb_Chr20g0109661' => 'lal', 'Lalb_Chr20g0109831' => 'lal', 'Lalb_Chr20g0121871' => 'lal', 'Lalb_Chr22g0355361' => 'lal', 'Lalb_Chr25g0286371' => 'lal', 'Lj1A1187G43' => 'lonja', 'Lj1A1205T50' => 'lonja', 'Lj1A800G33' => 'lonja', 'Lj1C1187T7' => 'lonja', 'Lj1C843T11' => 'lonja', 'Lj1g0010940' => 'lja', 'Lj2A288T69' => 'lonja', 'Lj3g0024276' => 'lja', 'Lj4A47T76' => 'lonja', 'Lj4g0005805' => 'lja', 'Lj4g0006097' => 'lja', 'Lj4g0008528' => 'lja', 'Lj4g0024907' => 'lja', 'Lj5g0012472' => 'lja', 'Lj5g0018648' => 'lja', 'Lj6C789G1' => 'lonja', 'Lj6g0004000' => 'lja', 'Lj7A292G67' => 'lonja', 'Lj7A292T64' => 'lonja', 'Lj9A400T58' => 'lonja', 'Lsat_1_v5_gn_1_126181' => 'lsa', 'Lsat_1_v5_gn_4_123041' => 'lsa', 'Lsat_1_v5_gn_4_133620' => 'lsa', 'Lsat_1_v5_gn_4_53221' => 'lsa', 'Lsat_1_v5_gn_4_71961' => 'lsa', 'Lsat_1_v5_gn_7_105241' => 'lsa', 'Lsat_1_v5_gn_7_21361' => 'lsa', 'Lsat_1_v5_gn_7_28860' => 'lsa', 'Lsat_1_v5_gn_7_31260' => 'lsa', 'Lsat_1_v5_gn_8_52801' => 'lsa', 'Manes.02G191400' => 'mes', 'Manes.03G110100' => 'mes', 'Manes.04G071100' => 'mes', 'Manes.05G100500' => 'mes', 'Manes.05G164700' => 'mes', 'Manes.15G087000' => 'mes', 'Manes.15G121500' => 'mes', 'Manes.16G028300' => 'mes', 'Manes.17G046100' => 'mes', 'Manes.17G069800' => 'mes', 'Manes.18G100500' => 'mes', 'Mapoly0002s0109' => 'mpo', 'Mapoly0024s0007' => 'mpo', 'Mapoly0089s0032' => 'mpo', 'MBI04_g42241_MAGBIO' => 'mbi', 'MBI05_g11988_MAGBIO' => 'mbi', 'MBI05_g35452_MAGBIO' => 'mbi', 'MBI07_g30179_MAGBIO' => 'mbi', 'MBI07_g35859_MAGBIO' => 'mbi', 'MBI07_g35860_MAGBIO' => 'mbi', 'MBI07_g37166_MAGBIO' => 'mbi', 'MBI08_g18172_MAGBIO' => 'mbi', 'MBI09_g08441_MAGBIO' => 'mbi', 'MBI13_g01676_MAGBIO' => 'mbi', 'MBI14_g42955_MAGBIO' => 'mbi', 'MBI16_g13161_MAGBIO' => 'mbi', 'MBI17_g27204_MAGBIO' => 'mbi', 'MBI19_g21595_MAGBIO' => 'mbi', 'MD00G1148400' => 'mdo', 'MD02G1301200' => 'mdo', 'MD03G1227800' => 'mdo', 'MD05G1041100' => 'mdo', 'MD05G1124800' => 'mdo', 'MD05G1284000' => 'mdo', 'MD05G1338800' => 'mdo', 'MD05G1338900' => 'mdo', 'MD07G1022800' => 'mdo', 'MD10G1047500' => 'mdo', 'MD10G1127500' => 'mdo', 'MD10G1262300' => 'mdo', 'MD10G1293800' => 'mdo', 'MD16G1074300' => 'mdo', 'Medtr1g021670' => 'mtr', 'Medtr1g096320' => 'mtr', 'Medtr2g013690' => 'mtr', 'Medtr2g019450' => 'mtr', 'Medtr2g085170' => 'mtr', 'Medtr4g088785' => 'mtr', 'Medtr8g055930' => 'mtr', 'Medtr8g085850' => 'mtr', 'MELO3C002605.2' => 'cme', 'MELO3C003891.2' => 'cme', 'MELO3C004012.2' => 'cme', 'MELO3C007134.2' => 'cme', 'MELO3C008118.2' => 'cme', 'MELO3C016700.2' => 'cme', 'MELO3C024127.2' => 'cme', 'MELO3C033361.2' => 'cme', 'MELO3C033362.2' => 'cme', 'Migut.C00430' => 'egut', 'Migut.C01246' => 'egut', 'Migut.E00101' => 'egut', 'Migut.H01486' => 'egut', 'Migut.H01939' => 'egut', 'Migut.K00360' => 'egut', 'Migut.M00910' => 'egut', 'Migut.M01139' => 'egut', 'Migut.N02677' => 'egut', 'MSTRG.13252' => 'ama', 'MSTRG.14701' => 'ama', 'MSTRG.1521' => 'ama', 'MSTRG.15884' => 'ama', 'MSTRG.16242' => 'ama', 'MSTRG.22285' => 'ama', 'MSTRG.22444' => 'ama', 'MSTRG.2349' => 'ama', 'MSTRG.26308' => 'ama', 'MSTRG.28296' => 'ama', 'MSTRG.9895' => 'ama', 'Nitab4.5_0000110g0060' => 'nta', 'Nitab4.5_0000420g0130' => 'nta', 'Nitab4.5_0000422g0030' => 'nta', 'Nitab4.5_0000560g0180' => 'nta', 'Nitab4.5_0000703g0100' => 'nta', 'Nitab4.5_0000786g0200' => 'nta', 'Nitab4.5_0001336g0020' => 'nta', 'Nitab4.5_0001796g0030' => 'nta', 'Nitab4.5_0003348g0060' => 'nta', 'Nitab4.5_0003698g0040' => 'nta', 'Nitab4.5_0003942g0090' => 'nta', 'Nitab4.5_0004775g0070' => 'nta', 'Nitab4.5_0004864g0030' => 'nta', 'Nitab4.5_0005615g0020' => 'nta', 'Nitab4.5_0009288g0030' => 'nta', 'Nitab4.5_0009341g0010' => 'nta', 'Nitab4.5_0009535g0010' => 'nta', 'Nn1g03995' => 'nnu', 'Nn1g04100' => 'nnu', 'Nn1g06530' => 'nnu', 'Nn3g16404' => 'nnu', 'Nn3g17212' => 'nnu', 'Nn3g20776' => 'nnu', 'Nn3g21923' => 'nnu', 'Nn5g27737' => 'nnu', 'Nn5g29461' => 'nnu', 'Nn7g38355' => 'nnu', 'Nn8g39873' => 'nnu', 'Oeu000548.2' => 'oeu', 'Oeu004672.1' => 'oeu', 'Oeu015605.2' => 'oeu', 'Oeu016092.1' => 'oeu', 'Oeu017879.3' => 'oeu', 'Oeu024910.1' => 'oeu', 'Oeu028965.1' => 'oeu', 'Oeu031269.1' => 'oeu', 'Oeu031270.1' => 'oeu', 'Oeu032535.1' => 'oeu', 'Oeu034151.1' => 'oeu', 'Oeu034152.1' => 'oeu', 'Oeu034588.2' => 'oeu', 'Oeu050846.1' => 'oeu', 'Oeu050849.2' => 'oeu', 'Oeu051063.2' => 'oeu', 'Oeu052368.1' => 'oeu', 'Oeu052370.1' => 'oeu', 'Os01g0210400' => 'osa', 'Os01g0304300' => 'osa', 'Os01g0749100' => 'osa', 'Os02g0745800' => 'osa', 'Os03g0769050' => 'osa', 'Os05g0531500' => 'osa', 'Os06g0724300' => 'osa', 'Os11g0198100' => 'osa', 'Peaxi162Scf00069g01425' => 'pax', 'Peaxi162Scf00280g00811' => 'pax', 'Peaxi162Scf00310g00615' => 'pax', 'Peaxi162Scf00362g00542' => 'pax', 'Peaxi162Scf00461g00310' => 'pax', 'Peaxi162Scf00530g00118' => 'pax', 'Peaxi162Scf00541g00057' => 'pax', 'Peaxi162Scf00661g00017' => 'pax', 'Peaxi162Scf00926g00027' => 'pax', 'Peaxi162Scf01064g00263' => 'pax', 'Peaxi162Scf01211g00135' => 'pax', 'PGR004G2336' => 'pgr', 'PGR042G0327' => 'pgr', 'PGR042G1957' => 'pgr', 'PGR042G2003' => 'pgr', 'PGR042G3929' => 'pgr', 'PGR083G1137' => 'pgr', 'PGR083G1364' => 'pgr', 'PGSC0003DMG400003381' => 'stu', 'PGSC0003DMG400003417' => 'stu', 'PGSC0003DMG400008981' => 'stu', 'PGSC0003DMG400012417' => 'stu', 'PGSC0003DMG400012823' => 'stu', 'PGSC0003DMG400016885' => 'stu', 'PGSC0003DMG400022812' => 'stu', 'PGSC0003DMG400029726' => 'stu', 'PGSC0003DMG401009243' => 'stu', 'PGSC0003DMG401031505' => 'stu', 'PGSC0003DMG402031505' => 'stu', 'Phvul.001G017600' => 'pvu', 'Phvul.002G193500' => 'pvu', 'Phvul.002G228900' => 'pvu', 'Phvul.002G236800' => 'pvu', 'Phvul.003G049500' => 'pvu', 'Phvul.005G072000' => 'pvu', 'Phvul.006G164800' => 'pvu', 'Phvul.006G185100' => 'pvu', 'Phvul.007G090000' => 'pvu', 'Potri.001G399800' => 'ptr', 'Potri.002G149900' => 'ptr', 'Potri.004G044100' => 'ptr', 'Potri.004G177600' => 'ptr', 'Potri.009G138000' => 'ptr', 'Potri.010G094000' => 'ptr', 'Potri.011G053000' => 'ptr', 'Potri.011G119300' => 'ptr', 'Potri.013G113700' => 'ptr', 'Potri.018G107800' => 'ptr', 'Potri.019G084100' => 'ptr', 'Pp3c14_23720' => 'ppa', 'Pp3c16_6340' => 'ppa', 'Pp3c23_13420' => 'ppa', 'Pp3c24_2740' => 'ppa', 'Pp3c25_860' => 'ppa', 'Pp3c8_21750' => 'ppa', 'Prupe.1G273000' => 'ppe', 'Prupe.1G273700' => 'ppe', 'Prupe.1G274100' => 'ppe', 'Prupe.2G023300' => 'ppe', 'Prupe.4G048000' => 'ppe', 'Prupe.4G080400' => 'ppe', 'Prupe.4G181200' => 'ppe', 'Prupe.8G056900' => 'ppe', 'Prupe.8G168700' => 'ppe', 'Psat1g189080' => 'psa', 'Psat1g204760' => 'psa', 'Psat4g175560' => 'psa', 'Psat4g177720' => 'psa', 'Psat5g244240' => 'psa', 'Psat6g010720' => 'psa', 'Psat6g187200' => 'psa', 'Psat7g072040' => 'psa', 'PSO017G3501' => 'pso', 'PSO063G2148' => 'pso', 'PSO063G5608' => 'pso', 'PSO210G6392' => 'pso', 'PSO541G2319' => 'pso', 'PSO541G2836' => 'pso', 'PSO541G4012' => 'pso', 'PSO541G6253' => 'pso', 'PSO675G0580' => 'pso', 'PSO675G0856' => 'pso', 'PSO675G5635' => 'pso', 'PSO675G9157' => 'pso', 'PSO832G1660' => 'pso', 'PSO832G1969' => 'pso', 'QL02p007186' => 'qlo', 'QL02p033904' => 'qlo', 'QL03p064391' => 'qlo', 'QL05p040593' => 'qlo', 'QL05p058242' => 'qlo', 'QL08p021825' => 'qlo', 'QL11p004981' => 'qlo', 'RcHm_v2.0_Chr1g0318301' => 'rch', 'RcHm_v2.0_Chr4g0418501' => 'rch', 'RcHm_v2.0_Chr4g0439971' => 'rch', 'RcHm_v2.0_Chr5g0008541' => 'rch', 'RcHm_v2.0_Chr5g0014101' => 'rch', 'RcHm_v2.0_Chr5g0014131' => 'rch', 'RcHm_v2.0_Chr5g0033621' => 'rch', 'RcHm_v2.0_Chr6g0272041' => 'rch', 'RcHm_v2.0_Chr6g0278831' => 'rch', 'Rhsim02G0130400' => 'rsi', 'Rhsim02G0171100' => 'rsi', 'Rhsim05G0053000' => 'rsi', 'Rhsim05G0053100' => 'rsi', 'Rhsim06G0096500' => 'rsi', 'Rhsim06G0096600' => 'rsi', 'Rhsim06G0199100' => 'rsi', 'Rhsim12G0062300' => 'rsi', 'Rhsim12G0062800' => 'rsi', 'Sabra02G0118600' => 'sbr', 'Sabra04G0027300' => 'sbr', 'Sabra04G0119500' => 'sbr', 'Sabra08G0112500' => 'sbr', 'Sabra11G0036800' => 'sbr', 'Sabra11G0103800' => 'sbr', 'Sabra13G0096300' => 'sbr', 'Sabra16G0262300' => 'sbr', 'Sabra18G0091700' => 'sbr', 'Sabra19G0095400' => 'sbr', 'SalBow6G3080' => 'sbo', 'SalBow7G1157' => 'sbo', 'SalBow7G2123' => 'sbo', 'SalBow7G2285' => 'sbo', 'SalBow7G3537' => 'sbo', 'SalBow8G2947' => 'sbo', 'SalBow8G4463' => 'sbo', 'SalBow8G5466' => 'sbo', 'Sc01g0001750' => 'sci', 'Sc02g0006640' => 'sci', 'Sc02g0006670' => 'sci', 'Sc04g0008220' => 'sci', 'Sc05g0006190' => 'sci', 'Sc08g0002760' => 'sci', 'Sc17g0006170' => 'sci', 'Sc22g0002050' => 'sci', 'Sc23g0001190' => 'sci', 'Sc24g0000980' => 'sci', 'Sed0006245' => 'sed', 'Sed0007543' => 'sed', 'Sed0009411' => 'sed', 'Sed0010765' => 'sed', 'Sed0012944' => 'sed', 'Sed0014682' => 'sed', 'Sed0016174' => 'sed', 'Sed0016796' => 'sed', 'Sed0020317' => 'sed', 'Sed0021467' => 'sed', 'SEGI_01316' => 'sgi', 'SEGI_03374' => 'sgi', 'SEGI_16265' => 'sgi', 'SEGI_18569' => 'sgi', 'SEGI_20351' => 'sgi', 'SEGI_26395' => 'sgi', 'SEGI_29469' => 'sgi', 'SEGI_34771' => 'sgi', 'SEGI_36769' => 'sgi', 'SEGI_37139' => 'sgi', 'SGA_v2.0_scaffold100G29687' => 'sas', 'SGA_v2.0_scaffold118G32472' => 'sas', 'SGA_v2.0_scaffold14G07051' => 'sas', 'SGA_v2.0_scaffold183G39845' => 'sas', 'SGA_v2.0_scaffold1G00174' => 'sas', 'SGA_v2.0_scaffold22G09714' => 'sas', 'SGA_v2.0_scaffold333G48992' => 'sas', 'SGA_v2.0_scaffold46G17491' => 'sas', 'SGA_v2.0_scaffold49G18294' => 'sas', 'SGA_v2.0_scaffold63G21658' => 'sas', 'SHI01741' => 'shi', 'SHI05771' => 'shi', 'SHI18077' => 'shi', 'SHI20525' => 'shi', 'SHI20527' => 'shi', 'SHI20528' => 'shi', 'SMO172G0185' => 'smo', 'SMO198G0020' => 'smo', 'SMO351G0006' => 'smo', 'SMO356G0118' => 'smo', 'SMO358G0296' => 'smo', 'SMO367G0079' => 'smo', 'SMO367G1277' => 'smo', 'Solyc01g014220.3' => 'sly', 'Solyc01g111770.2' => 'sly', 'Solyc02g078180.3' => 'sly', 'Solyc03g006430.3' => 'sly', 'Solyc03g006456.1' => 'sly', 'Solyc03g079860.2' => 'sly', 'Solyc04g079770.3' => 'sly', 'Solyc05g007430.4' => 'sly', 'Solyc07g063150.3' => 'sly', 'Solyc08g016620.3' => 'sly', 'Solyc09g057590.3' => 'sly', 'Solyc09g057600.1' => 'sly', 'Solyc10g009050.3' => 'sly', 'Solyc11g017420.2' => 'sly', 'Sopen01g053810' => 'spe', 'Sopen02g023040' => 'spe', 'Sopen03g002440' => 'spe', 'Sopen04g033350' => 'spe', 'Sopen05g003310' => 'spe', 'Sopen07g004050' => 'spe', 'Sopen07g031340' => 'spe', 'Sopen08g006990' => 'spe', 'Sopen10g004830' => 'spe', 'Sopen11g009370' => 'spe', 'Sp1g24450' => 'spa', 'Sp1g29670' => 'spa', 'Sp1g39600' => 'spa', 'Sp2g11080' => 'spa', 'Sp2g13970' => 'spa', 'Sp4g16130' => 'spa', 'Sp6g13080' => 'spa', 'Sp7g37270' => 'spa', 'TAR371G0065' => 'tar', 'TAR376G0340' => 'tar', 'TAR376G0435' => 'tar', 'TAR381G0002' => 'tar', 'TAR381G1236' => 'tar', 'TAR624G0055' => 'tar', 'TAR624G0324' => 'tar', 'TAR624G0696' => 'tar', 'TAR624G0906' => 'tar', 'TAR625G0107' => 'tar', 'TAR626G0015' => 'tar', 'TAR626G1356' => 'tar', 'TAR627G0888' => 'tar', 'TAR628G0399' => 'tar', 'TAR628G1327' => 'tar', 'TAR629G2831' => 'tar', 'TAR629G2874' => 'tar', 'TAR633G1432' => 'tar', 'TAR633G2771' => 'tar', 'THA.LOC104803394' => 'tha', 'THA.LOC104805153' => 'tha', 'THA.LOC104806784' => 'tha', 'THA.LOC104810473' => 'tha', 'THA.LOC104813100' => 'tha', 'THA.LOC104814215' => 'tha', 'THA.LOC104815554' => 'tha', 'THA.LOC104820544' => 'tha', 'THA.LOC104824754' => 'tha', 'THA.LOC104827717' => 'tha', 'Thecc.02G031400' => 'tca', 'Thecc.02G055900' => 'tca', 'Thecc.02G350800' => 'tca', 'Thecc.06G150900' => 'tca', 'Thecc.06G186600' => 'tca', 'Thecc.07G089600' => 'tca', 'Thecc.08G020400' => 'tca', 'Thecc.08G182100' => 'tca', 'Thhalv10000873m.g' => 'esa', 'Thhalv10004185m.g' => 'esa', 'Thhalv10006981m.g' => 'esa', 'Thhalv10007204m.g' => 'esa', 'Thhalv10011374m.g' => 'esa', 'Thhalv10013482m.g' => 'esa', 'Thhalv10017801m.g' => 'esa', 'Thhalv10024983m.g' => 'esa', 'TPR.G12072' => 'tpr', 'TPR.G15769' => 'tpr', 'TPR.G16504' => 'tpr', 'TPR.G16506' => 'tpr', 'TPR.G24345' => 'tpr', 'TPR.G26666' => 'tpr', 'TPR.G27320' => 'tpr', 'TPR.G31819' => 'tpr', 'TPR.G38879' => 'tpr', 'TPR.G39015' => 'tpr', 'TPR.G8819' => 'tpr', 'TWI09G0924' => 'twi', 'TWI12G0811' => 'twi', 'TWI12G1294' => 'twi', 'TWI31G0150' => 'twi', 'TWI36G1262' => 'twi', 'TWI38G1287' => 'twi', 'TWI38G1633' => 'twi', 'TWI38G1982' => 'twi', 'TWI39G0116' => 'twi', 'TWI60G1011' => 'twi', 'TWI63G0171' => 'twi', 'TWI73G0839' => 'twi', 'TWI79G1511' => 'twi', 'unitig_0.g915' => 'ugi', 'unitig_0.g916' => 'ugi', 'unitig_21.g20219' => 'ugi', 'unitig_21.g20416' => 'ugi', 'unitig_578.g16132' => 'ugi', 'unitig_578.g16718' => 'ugi', 'unitig_62.g23481' => 'ugi', 'unitig_744.g24535' => 'ugi', 'unitig_749.g13525' => 'ugi', 'vmacro01248' => 'vma', 'vmacro02290' => 'vma', 'vmacro10946' => 'vma', 'vmacro11865' => 'vma', 'vmacro12493' => 'vma', 'vmacro17322' => 'vma', 'vmacro21599' => 'vma', 'vmacro23041' => 'vma', 'VMungo0251G0004' => 'vmu', 'VMungo0251G2639' => 'vmu', 'VMungo0251G2967' => 'vmu', 'VMungo0540G0864' => 'vmu', 'VMungo0540G1569' => 'vmu', 'VMungo0647G0317' => 'vmu', 'VMungo0720G1373' => 'vmu', 'VMungo0720G1508' => 'vmu', 'VMungo1080G0485' => 'vmu', 'VMungo1215G3177' => 'vmu', 'Zm00001eb112600' => 'zma', 'Zm00001eb120220' => 'zma', 'Zm00001eb153240' => 'zma', 'Zm00001eb168880' => 'zma', 'Zm00001eb213920' => 'zma', 'Zm00001eb228280' => 'zma', 'Zm00001eb254580' => 'zma', 'Zm00001eb272180' => 'zma', 'Zm00001eb293190' => 'zma', 'Zm00001eb322930' => 'zma', 'Zm00001eb353360' => 'zma', 'Zm00001eb353390' => 'zma', 'Zm00001eb353430' => 'zma', 'Zm00001eb353440' => 'zma', 'Zm00001eb353780' => 'zma' ) $gf_id = 'HOM05D000499' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000499' ) $data_identifier = 'HOM05D000499' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 29, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 12, 'amhyb' => (int) 8, 'aly' => (int) 12, 'aox' => (int) 9, 'arhy' => (int) 26, 'ath' => (int) 8, 'atr' => (int) 7, 'acertr' => (int) 10, 'cqu' => (int) 15, 'bca' => (int) 29, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 11, 'cansat' => (int) 8, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 9, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 8, 'cpa' => (int) 10, 'csa' => (int) 7, 'camsi' => (int) 20, 'dca' => (int) 8, 'din' => (int) 12, 'dzi' => (int) 14, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 6, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 38, 'gra' => (int) 16, 'vvi' => (int) 8, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 5, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 11, 'lja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 11, 'mpo' => (int) 3, 'mbi' => (int) 14, 'mdo' => (int) 14, 'mtr' => (int) 8, 'cme' => (int) 9, 'egut' => (int) 9, 'ama' => (int) 11, 'nta' => (int) 17, 'nnu' => (int) 11, 'oeu' => (int) 18, 'osa' => (int) 8, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 6, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 9, 'rsi' => (int) 9, 'sbr' => (int) 10, 'sbo' => (int) 8, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 10, 'sas' => (int) 10, 'shi' => (int) 6, 'smo' => (int) 7, 'sly' => (int) 14, 'spe' => (int) 10, 'spa' => (int) 8, 'tar' => (int) 19, 'tha' => (int) 10, 'tca' => (int) 8, 'esa' => (int) 8, 'tpr' => (int) 11, 'twi' => (int) 13, 'ugi' => (int) 9, 'vma' => (int) 8, 'vmu' => (int) 10, 'zma' => (int) 15 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb353780' $species_info = array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ) $local_species = 'lonja' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000499', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1066', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p29780' => 'bna', 'A02p33180' => 'bna', 'A03p16470' => 'bna', 'A03p66010' => 'bna', 'A04p25970' => 'bna', 'A06p01270' => 'bna', 'A06p46080' => 'bna', 'A07p11400' => 'bna', 'A08p01840' => 'bna', 'A08p08230' => 'bna', 'A08p25740' => 'bna', 'A09p32070' => 'bna', 'A09p37830' => 'bna', 'A09p42840' => 'bna', 'A09p42850' => 'bna', 'Aa31LG10G2060' => 'aar', 'Aa31LG2G7410' => 'aar', 'Aa31LG6G10200' => 'aar', 'Aa31LG6G16680' => 'aar', 'Aa31LG6G8470' => 'aar', 'Aa31LG9G12730' => 'aar', 'Aa31LG9G13680' => 'aar', 'Aa31LG9G14920' => 'aar', 'Aa31LG9G6650' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4977' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5467' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3254' => 'aag', 'Actinidia02578' => 'ach', 'Actinidia07693' => 'ach', 'Actinidia08413' => 'ach', 'Actinidia08414' => 'ach', 'Actinidia15289' => 'ach', 'Actinidia19871' => 'ach', 'Actinidia21475' => 'ach', 'Actinidia22576' => 'ach', 'Actinidia28327' => 'ach', 'Actinidia32491' => 'ach', 'Actinidia39463' => 'ach', 'Actinidia39571' => 'ach', 'Ah.01g013750' => 'amhyb', 'Ah.01g023210' => 'amhyb', 'Ah.04g164850' => 'amhyb', 'Ah.05g178060' => 'amhyb', 'Ah.07g204270' => 'amhyb', 'Ah.07g208480' => 'amhyb', 'Ah.09g237410' => 'amhyb', 'Ah.14g089460' => 'amhyb', 'AL1G41790' => 'aly', 'AL1G49050' => 'aly', 'AL1G53810' => 'aly', 'AL1G61400' => 'aly', 'AL4G18580' => 'aly', 'AL5G12510' => 'aly', 'AL5G12540' => 'aly', 'AL6G43230' => 'aly', 'AL7G10370' => 'aly', 'AL7G19250' => 'aly', 'AL8G12240' => 'aly', 'AL8G18540' => 'aly', 'Aqoxy1G02409' => 'aox', 'Aqoxy2G03993' => 'aox', 'Aqoxy3G03357' => 'aox', 'Aqoxy4G00785' => 'aox', 'Aqoxy5G02598' => 'aox', 'Aqoxy6G00132' => 'aox', 'Aqoxy7G01776' => 'aox', 'Aqoxy7G02316' => 'aox', 'Aqoxy7G03973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.12AFKW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B8730' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27IQR1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3F75VG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3RE0GA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41TCQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.527VTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FIR39' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5W8UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DA38EV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ63HS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H1I32C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HC27T5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4M8AP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7N3CZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9UVDZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LS1NQA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT1D4B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SKC4TM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCFV76' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF9Q1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQWD9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1ZM88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WE07RT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YCK7VH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJE6Q6' => 'arhy', 'AT1G28240' => 'ath', 'AT1G34550' => 'ath', 'AT1G53040' => 'ath', 'AT2G02910' => 'ath', 'AT4G09630' => 'ath', 'AT4G38500' => 'ath', 'AT5G42660' => 'ath', 'AT5G46220' => 'ath', 'ATR0152G026' => 'atr', 'ATR0564G343' => 'atr', 'ATR0706G151' => 'atr', 'ATR0733G207' => 'atr', 'ATR0751G234' => 'atr', 'ATR0807G048' => 'atr', 'ATR1091G084' => 'atr', 'Atru.chr10.1229' => 'acertr', 'Atru.chr10.1230' => 'acertr', 'Atru.chr10.1874' => 'acertr', 'Atru.chr11.1808' => 'acertr', 'Atru.chr13.1795' => 'acertr', 'Atru.chr13.570' => 'acertr', 'Atru.chr2.2608' => 'acertr', 'Atru.chr2.2609' => 'acertr', 'Atru.chr5.3428' => 'acertr', 'Atru.chr8.1171' => 'acertr', 'AUR62004651' => 'cqu', 'AUR62008675' => 'cqu', 'AUR62010014' => 'cqu', 'AUR62013004' => 'cqu', 'AUR62014825' => 'cqu', 'AUR62015015' => 'cqu', 'AUR62015151' => 'cqu', 'AUR62017020' => 'cqu', 'AUR62019422' => 'cqu', 'AUR62023570' => 'cqu', 'AUR62025571' => 'cqu', 'AUR62029098' => 'cqu', 'AUR62033863' => 'cqu', 'AUR62034296' => 'cqu', 'AUR62040075' => 'cqu', 'BcaB02g07334' => 'bca', 'BcaB02g10575' => 'bca', 'BcaB03g12119' => 'bca', 'BcaB03g12120' => 'bca', 'BcaB03g13945' => 'bca', 'BcaB04g17123' => 'bca', 'BcaB04g17867' => 'bca', 'BcaB04g19839' => 'bca', 'BcaB07g30317' => 'bca', 'BcaB07g32432' => 'bca', 'BcaB07g33362' => 'bca', 'BcaB08g36611' => 'bca', 'BcaC01g00028' => 'bca', 'BcaC01g01356' => 'bca', 'BcaC01g02034' => 'bca', 'BcaC01g06051' => 'bca', 'BcaC03g16839' => 'bca', 'BcaC03g17176' => 'bca', 'BcaC05g26829' => 'bca', 'BcaC06g31490' => 'bca', 'BcaC06g35344' => 'bca', 'BcaC06g36570' => 'bca', 'BcaC07g37537' => 'bca', 'BcaC08g43491' => 'bca', 'BcaC08g43773' => 'bca', 'BcaNung00234' => 'bca', 'BcaNung01982' => 'bca', 'BcaNung03707' => 'bca', 'BcaNung06454' => 'bca', 'BolC2t10762H' => 'bol', 'BolC2t11191H' => 'bol', 'BolC3t14322H' => 'bol', 'BolC3t19747H' => 'bol', 'BolC3t21425H' => 'bol', 'BolC4t27800H' => 'bol', 'BolC5t31423H' => 'bol', 'BolC6t35951H' => 'bol', 'BolC6t36282H' => 'bol', 'BolC7t40678H' => 'bol', 'BolC7t40679H' => 'bol', 'BolC7t42222H' => 'bol', 'BolC7t43492H' => 'bol', 'BolC7t46785H' => 'bol', 'BolC8t47853H' => 'bol', 'BolC9t56805H' => 'bol', 'BraA02t08000Z' => 'bra', 'BraA02t08341Z' => 'bra', 'BraA03t10936Z' => 'bra', 'BraA03t15657Z' => 'bra', 'BraA04t18100Z' => 'bra', 'BraA05t20523Z' => 'bra', 'BraA06t23353Z' => 'bra', 'BraA06t27473Z' => 'bra', 'BraA06t27769Z' => 'bra', 'BraA07t28928Z' => 'bra', 'BraA08t32236Z' => 'bra', 'BraA08t32841Z' => 'bra', 'BraA08t34524Z' => 'bra', 'BraA09t38742Z' => 'bra', 'BraA09t39295Z' => 'bra', 'C02p47180' => 'bna', 'C02p50990' => 'bna', 'C03p19360' => 'bna', 'C03p74950' => 'bna', 'C03p91000' => 'bna', 'C04p63260' => 'bna', 'C05p27050' => 'bna', 'C06p08750' => 'bna', 'C06p11490' => 'bna', 'C07p02820' => 'bna', 'C07p17180' => 'bna', 'C07p29440' => 'bna', 'C07p63730' => 'bna', 'C09p39260' => 'bna', 'CAN.G1164.34' => 'can', 'CAN.G1164.39' => 'can', 'CAN.G1530.3' => 'can', 'CAN.G162.61' => 'can', 'CAN.G176.6' => 'can', 'CAN.G289.49' => 'can', 'CAN.G370.21' => 'can', 'CAN.G370.22' => 'can', 'CAN.G371.117' => 'can', 'CAN.G58.37' => 'can', 'CAN.G588.98' => 'can', 'CANSAT21G2266' => 'cansat', 'CANSAT25G2799' => 'cansat', 'CANSAT35G0862' => 'cansat', 'CANSAT35G1704' => 'cansat', 'CANSAT35G1760' => 'cansat', 'CANSAT56G3971' => 'cansat', 'CANSAT56G4116' => 'cansat', 'CANSAT80G1259' => 'cansat', 'CARHR027730' => 'chi', 'CARHR033880' => 'chi', 'CARHR043270' => 'chi', 'CARHR145330' => 'chi', 'CARHR145340' => 'chi', 'CARHR175570' => 'chi', 'CARHR181570' => 'chi', 'CARHR258470' => 'chi', 'CARHR260490' => 'chi', 'CARHR294220' => 'chi', 'Carub.0001s2668' => 'cru', 'Carub.0001s3257' => 'cru', 'Carub.0001s4220' => 'cru', 'Carub.0005s0179' => 'cru', 'Carub.0006s2807' => 'cru', 'Carub.0007s0039' => 'cru', 'Carub.0008s0169' => 'cru', 'Carub.0008s0636' => 'cru', 'Ca_00338_v3' => 'car', 'Ca_00542_v3' => 'car', 'Ca_01844_v3' => 'car', 'Ca_10611_v3' => 'car', 'Ca_13326_v3' => 'car', 'Ca_17944_v3' => 'car', 'Ca_18546_v3' => 'car', 'Ca_24219_v3' => 'car', 'Ca_29972_v3' => 'car', 'CBR_g3681' => 'cbr', 'CBR_g40021' => 'cbr', 'Cc01_g08140' => 'ccan', 'Cc02_g13410' => 'ccan', 'Cc02_g37480' => 'ccan', 'Cc05_g12030' => 'ccan', 'Cc09_g03370' => 'ccan', 'Cc09_g10300' => 'ccan', 'Cc10_g03530' => 'ccan', 'Cc10_g11380' => 'ccan', 'CDE01G0176' => 'cde', 'CDE02G0675' => 'cde', 'CDE02G0942' => 'cde', 'CDE02G1153' => 'cde', 'CDE02G4177' => 'cde', 'CDE04G2117' => 'cde', 'CDE04G2736' => 'cde', 'CDE08G1161' => 'cde', 'CDE09G1238' => 'cde', 'Cfa000467' => 'cfa', 'Cfa000947' => 'cfa', 'Cfa004969' => 'cfa', 'Cfa005284' => 'cfa', 'Cfa008993' => 'cfa', 'Cfa018187' => 'cfa', 'Cfa018454' => 'cfa', 'Cfa020585' => 'cfa', 'Ciclev10000424m.g' => 'ccl', 'Ciclev10003605m.g' => 'ccl', 'Ciclev10007828m.g' => 'ccl', 'Ciclev10014620m.g' => 'ccl', 'Ciclev10015169m.g' => 'ccl', 'Ciclev10018291m.g' => 'ccl', 'Ciclev10028256m.g' => 'ccl', 'Ciclev10033822m.g' => 'ccl', 'CiPaw.05G060300' => 'cil', 'CiPaw.05G085000' => 'cil', 'CiPaw.06G083700' => 'cil', 'CiPaw.06G120300' => 'cil', 'CiPaw.09G060500' => 'cil', 'CiPaw.09G123800' => 'cil', 'CiPaw.11G169700' => 'cil', 'CiPaw.12G118300' => 'cil', 'CiPaw.15G071000' => 'cil', 'CiPaw.15G081900' => 'cil', 'ClCG01G024610' => 'cla', 'ClCG03G006070' => 'cla', 'ClCG05G019250' => 'cla', 'ClCG09G009500' => 'cla', 'ClCG11G008200' => 'cla', 'ClCG11G018080' => 'cla', 'COL.COLO4_17373' => 'col', 'COL.COLO4_22994' => 'col', 'COL.COLO4_26389' => 'col', 'COL.COLO4_27170' => 'col', 'COL.COLO4_31074' => 'col', 'COL.COLO4_31465' => 'col', 'COL.COLO4_36438' => 'col', 'COL.COLO4_36439' => 'col', 'Cpa.g.c38781' => 'cpa', 'Cpa.g.sc128.12' => 'cpa', 'Cpa.g.sc166.7' => 'cpa', 'Cpa.g.sc166.8' => 'cpa', 'Cpa.g.sc20.111' => 'cpa', 'Cpa.g.sc27.31' => 'cpa', 'Cpa.g.sc64.36' => 'cpa', 'Cpa.g.sc64.37' => 'cpa', 'Cpa.g.sc66.49' => 'cpa', 'Cpa.g.sc80.64' => 'cpa', 'CsaV3_1G012320' => 'csa', 'CsaV3_2G008480' => 'csa', 'CsaV3_2G033450' => 'csa', 'CsaV3_3G044830' => 'csa', 'CsaV3_4G033710' => 'csa', 'CsaV3_6G051730' => 'csa', 'CsaV3_7G025350' => 'csa', 'CSS0001067' => 'camsi', 'CSS0005996' => 'camsi', 'CSS0006590' => 'camsi', 'CSS0009673' => 'camsi', 'CSS0010201' => 'camsi', 'CSS0010549' => 'camsi', 'CSS0011364' => 'camsi', 'CSS0014473' => 'camsi', 'CSS0014961' => 'camsi', 'CSS0020191' => 'camsi', 'CSS0021165' => 'camsi', 'CSS0022306' => 'camsi', 'CSS0030591' => 'camsi', 'CSS0030696' => 'camsi', 'CSS0032653' => 'camsi', 'CSS0037487' => 'camsi', 'CSS0041102' => 'camsi', 'CSS0041261' => 'camsi', 'CSS0046246' => 'camsi', 'CSS0049256' => 'camsi', 'DCAR_004075' => 'dca', 'DCAR_011538' => 'dca', 'DCAR_019553' => 'dca', 'DCAR_020952' => 'dca', 'DCAR_021739' => 'dca', 'DCAR_027407' => 'dca', 'DCAR_027913' => 'dca', 'DCAR_028066' => 'dca', 'Dinv05899' => 'din', 'Dinv07563' => 'din', 'Dinv08010' => 'din', 'Dinv14125' => 'din', 'Dinv20172' => 'din', 'Dinv30743' => 'din', 'Dinv31229' => 'din', 'Dinv34162' => 'din', 'Dinv36028' => 'din', 'Dinv39368' => 'din', 'Dinv40565' => 'din', 'Dinv41706' => 'din', 'Duzib052G0089' => 'dzi', 'Duzib116G0641' => 'dzi', 'Duzib132G0069' => 'dzi', 'Duzib132G1219' => 'dzi', 'Duzib147G0278' => 'dzi', 'Duzib160G0480' => 'dzi', 'Duzib170G0661' => 'dzi', 'Duzib177G0591' => 'dzi', 'Duzib187G1353' => 'dzi', 'Duzib192G0858' => 'dzi', 'Duzib192G0883' => 'dzi', 'Duzib213G0506' => 'dzi', 'Duzib235G0289' => 'dzi', 'Duzib251G0422' => 'dzi', 'ECA232G3898' => 'eca', 'ECA233G5950' => 'eca', 'ECA234G1699' => 'eca', 'ECA234G2421' => 'eca', 'ECA236G0426' => 'eca', 'ECA236G4331' => 'eca', 'ECA248G2573' => 'eca', 'EL10Ac1g00077' => 'bvu', 'EL10Ac1g01746' => 'bvu', 'EL10Ac2g03464' => 'bvu', 'EL10Ac4g08176' => 'bvu', 'EL10Ac7g17521' => 'bvu', 'EL10Ac8g20386' => 'bvu', 'EL10Ac9g21343' => 'bvu', 'EL10Ac9g22688' => 'bvu', 'Eucgr.B03434' => 'egr', 'Eucgr.D00618' => 'egr', 'Eucgr.E02395' => 'egr', 'Eucgr.F01129' => 'egr', 'Eucgr.F02622' => 'egr', 'Eucgr.F04207' => 'egr', 'FAN01G0570' => 'fan', 'FAN03G3351' => 'fan', 'FAN06G3702' => 'fan', 'FAN07G2149' => 'fan', 'FAN10G3758' => 'fan', 'FAN11G1170' => 'fan', 'FAN11G2050' => 'fan', 'FAN11G2724' => 'fan', 'FAN12G1700' => 'fan', 'FAN12G2028' => 'fan', 'FAN15G1160' => 'fan', 'FAN15G3063' => 'fan', 'FAN16G2540' => 'fan', 'FAN16G3077' => 'fan', 'FAN16G3624' => 'fan', 'FAN17G0221' => 'fan', 'FAN20G2492' => 'fan', 'FAN20G2905' => 'fan', 'FAN21G0548' => 'fan', 'FAN21G1300' => 'fan', 'FAN22G0077' => 'fan', 'FAN22G1315' => 'fan', 'FAN24G1280' => 'fan', 'FAN24G1445' => 'fan', 'FAN24G3527' => 'fan', 'FAN25G0464' => 'fan', 'FAN25G2885' => 'fan', 'FAN25G3270' => 'fan', 'FAN27G1101' => 'fan', 'FAN27G2846' => 'fan', 'FAN27G3524' => 'fan', 'FvH4_2g11770' => 'fve', 'FvH4_2g15630' => 'fve', 'FvH4_3g05570' => 'fve', 'FvH4_3g09110' => 'fve', 'FvH4_3g19940' => 'fve', 'FvH4_4g04821' => 'fve', 'FvH4_4g31480' => 'fve', 'FvH4_7g01740' => 'fve', 'Glyma.05G130400' => 'gma', 'Glyma.05G156400' => 'gma', 'Glyma.07G197000' => 'gma', 'Glyma.08G085151' => 'gma', 'Glyma.08G114500' => 'gma', 'Glyma.08G300400' => 'gma', 'Glyma.10G215800' => 'gma', 'Glyma.12G224400' => 'gma', 'Glyma.13G179300' => 'gma', 'Glyma.13G218151' => 'gma', 'Glyma.13G238800' => 'gma', 'Glyma.13G276900' => 'gma', 'Glyma.14G078200' => 'gma', 'Glyma.15G074500' => 'gma', 'Glyma.15G094100' => 'gma', 'Glyma.17G247200' => 'gma', 'Glyma.18G120100' => 'gma', 'Glyma.20G176000' => 'gma', 'Gohir.A01G063600' => 'ghi', 'Gohir.A01G170301' => 'ghi', 'Gohir.A02G060500' => 'ghi', 'Gohir.A05G133850' => 'ghi', 'Gohir.A05G161400' => 'ghi', 'Gohir.A06G012900' => 'ghi', 'Gohir.A06G035901' => 'ghi', 'Gohir.A06G127100' => 'ghi', 'Gohir.A06G210500' => 'ghi', 'Gohir.A08G008650' => 'ghi', 'Gohir.A09G072700' => 'ghi', 'Gohir.A09G088301' => 'ghi', 'Gohir.A10G040600' => 'ghi', 'Gohir.A12G036300' => 'ghi', 'Gohir.A12G143350' => 'ghi', 'Gohir.A12G165500' => 'ghi', 'Gohir.A13G145700' => 'ghi', 'Gohir.D01G050000' => 'ghi', 'Gohir.D01G051366' => 'ghi', 'Gohir.D01G161350' => 'ghi', 'Gohir.D02G065900' => 'ghi', 'Gohir.D05G164200' => 'ghi', 'Gohir.D05G355500' => 'ghi', 'Gohir.D06G010400' => 'ghi', 'Gohir.D06G111250' => 'ghi', 'Gohir.D06G132000' => 'ghi', 'Gohir.D06G210500' => 'ghi', 'Gohir.D07G165675' => 'ghi', 'Gohir.D08G062240' => 'ghi', 'Gohir.D08G086101' => 'ghi', 'Gohir.D08G138060' => 'ghi', 'Gohir.D09G072300' => 'ghi', 'Gohir.D10G041400' => 'ghi', 'Gohir.D11G191020' => 'ghi', 'Gohir.D11G212066' => 'ghi', 'Gohir.D12G036300' => 'ghi', 'Gohir.D12G168600' => 'ghi', 'Gohir.D13G150600' => 'ghi', 'Gorai.001G057300' => 'gra', 'Gorai.002G069900' => 'gra', 'Gorai.002G200000' => 'gra', 'Gorai.003G067600' => 'gra', 'Gorai.005G074800' => 'gra', 'Gorai.006G087300' => 'gra', 'Gorai.008G037500' => 'gra', 'Gorai.008G181400' => 'gra', 'Gorai.009G169400' => 'gra', 'Gorai.009G387900' => 'gra', 'Gorai.010G013300' => 'gra', 'Gorai.010G153800' => 'gra', 'Gorai.010G255800' => 'gra', 'Gorai.011G043700' => 'gra', 'Gorai.011G198900' => 'gra', 'Gorai.013G168400' => 'gra', 'GSVIVG01005212001' => 'vvi', 'GSVIVG01006163001' => 'vvi', 'GSVIVG01009625001' => 'vvi', 'GSVIVG01014338001' => 'vvi', 'GSVIVG01020005001' => 'vvi', 'GSVIVG01021450001' => 'vvi', 'GSVIVG01023975001' => 'vvi', 'GSVIVG01034490001' => 'vvi', 'HanXRQChr04g0112071' => 'han', 'HanXRQChr05g0131151' => 'han', 'HanXRQChr09g0262371' => 'han', 'HanXRQChr09g0268401' => 'han', 'HanXRQChr10g0279241' => 'han', 'HanXRQChr10g0297961' => 'han', 'HanXRQChr11g0326231' => 'han', 'HanXRQChr11g0328471' => 'han', 'HanXRQChr16g0507941' => 'han', 'HanXRQChr17g0560211' => 'han', 'Haze_02108' => 'cav', 'Haze_02428' => 'cav', 'Haze_05593' => 'cav', 'Haze_06448' => 'cav', 'Haze_09427' => 'cav', 'Haze_12022' => 'cav', 'Haze_17612' => 'cav', 'Haze_17928' => 'cav', 'Hma1.2p1_0032F.1_g019250' => 'hma', 'Hma1.2p1_0163F.1_g072690' => 'hma', 'Hma1.2p1_0265F.1_g106710' => 'hma', 'Hma1.2p1_0286F.1_g113970' => 'hma', 'Hma1.2p1_0363F.1_g136640' => 'hma', 'Hma1.2p1_0584F.1_g183470' => 'hma', 'Hma1.2p1_0885F.1_g232570' => 'hma', 'HPP92_006022' => 'vpl', 'HPP92_007320' => 'vpl', 'HPP92_011521' => 'vpl', 'HPP92_019387' => 'vpl', 'HPP92_024038' => 'vpl', 'Hund05891' => 'sun', 'Hund06450' => 'sun', 'Hund12053' => 'sun', 'Hund16800' => 'sun', 'Hund21222' => 'sun', 'Hund22896' => 'sun', 'Hund23746' => 'sun', 'Hund27083' => 'sun', 'Lalb_Chr02g0141831' => 'lal', 'Lalb_Chr02g0141841' => 'lal', 'Lalb_Chr05g0220411' => 'lal', 'Lalb_Chr06g0162081' => 'lal', 'Lalb_Chr09g0327651' => 'lal', 'Lalb_Chr13g0295051' => 'lal', 'Lalb_Chr15g0086801' => 'lal', 'Lalb_Chr16g0383781' => 'lal', 'Lalb_Chr16g0383791' => 'lal', 'Lalb_Chr18g0055441' => 'lal', 'Lalb_Chr18g0059611' => 'lal', 'Lalb_Chr20g0109661' => 'lal', 'Lalb_Chr20g0109831' => 'lal', 'Lalb_Chr20g0121871' => 'lal', 'Lalb_Chr22g0355361' => 'lal', 'Lalb_Chr25g0286371' => 'lal', 'Lj1A1187G43' => 'lonja', 'Lj1A1205T50' => 'lonja', 'Lj1A800G33' => 'lonja', 'Lj1C1187T7' => 'lonja', 'Lj1C843T11' => 'lonja', 'Lj1g0010940' => 'lja', 'Lj2A288T69' => 'lonja', 'Lj3g0024276' => 'lja', 'Lj4A47T76' => 'lonja', 'Lj4g0005805' => 'lja', 'Lj4g0006097' => 'lja', 'Lj4g0008528' => 'lja', 'Lj4g0024907' => 'lja', 'Lj5g0012472' => 'lja', 'Lj5g0018648' => 'lja', 'Lj6C789G1' => 'lonja', 'Lj6g0004000' => 'lja', 'Lj7A292G67' => 'lonja', 'Lj7A292T64' => 'lonja', 'Lj9A400T58' => 'lonja', 'Lsat_1_v5_gn_1_126181' => 'lsa', 'Lsat_1_v5_gn_4_123041' => 'lsa', 'Lsat_1_v5_gn_4_133620' => 'lsa', 'Lsat_1_v5_gn_4_53221' => 'lsa', 'Lsat_1_v5_gn_4_71961' => 'lsa', 'Lsat_1_v5_gn_7_105241' => 'lsa', 'Lsat_1_v5_gn_7_21361' => 'lsa', 'Lsat_1_v5_gn_7_28860' => 'lsa', 'Lsat_1_v5_gn_7_31260' => 'lsa', 'Lsat_1_v5_gn_8_52801' => 'lsa', 'Manes.02G191400' => 'mes', 'Manes.03G110100' => 'mes', 'Manes.04G071100' => 'mes', 'Manes.05G100500' => 'mes', 'Manes.05G164700' => 'mes', 'Manes.15G087000' => 'mes', 'Manes.15G121500' => 'mes', 'Manes.16G028300' => 'mes', 'Manes.17G046100' => 'mes', 'Manes.17G069800' => 'mes', 'Manes.18G100500' => 'mes', 'Mapoly0002s0109' => 'mpo', 'Mapoly0024s0007' => 'mpo', 'Mapoly0089s0032' => 'mpo', 'MBI04_g42241_MAGBIO' => 'mbi', 'MBI05_g11988_MAGBIO' => 'mbi', 'MBI05_g35452_MAGBIO' => 'mbi', 'MBI07_g30179_MAGBIO' => 'mbi', 'MBI07_g35859_MAGBIO' => 'mbi', 'MBI07_g35860_MAGBIO' => 'mbi', 'MBI07_g37166_MAGBIO' => 'mbi', 'MBI08_g18172_MAGBIO' => 'mbi', 'MBI09_g08441_MAGBIO' => 'mbi', 'MBI13_g01676_MAGBIO' => 'mbi', 'MBI14_g42955_MAGBIO' => 'mbi', 'MBI16_g13161_MAGBIO' => 'mbi', 'MBI17_g27204_MAGBIO' => 'mbi', 'MBI19_g21595_MAGBIO' => 'mbi', 'MD00G1148400' => 'mdo', 'MD02G1301200' => 'mdo', 'MD03G1227800' => 'mdo', 'MD05G1041100' => 'mdo', 'MD05G1124800' => 'mdo', 'MD05G1284000' => 'mdo', 'MD05G1338800' => 'mdo', 'MD05G1338900' => 'mdo', 'MD07G1022800' => 'mdo', 'MD10G1047500' => 'mdo', 'MD10G1127500' => 'mdo', 'MD10G1262300' => 'mdo', 'MD10G1293800' => 'mdo', 'MD16G1074300' => 'mdo', 'Medtr1g021670' => 'mtr', 'Medtr1g096320' => 'mtr', 'Medtr2g013690' => 'mtr', 'Medtr2g019450' => 'mtr', 'Medtr2g085170' => 'mtr', 'Medtr4g088785' => 'mtr', 'Medtr8g055930' => 'mtr', 'Medtr8g085850' => 'mtr', 'MELO3C002605.2' => 'cme', 'MELO3C003891.2' => 'cme', 'MELO3C004012.2' => 'cme', 'MELO3C007134.2' => 'cme', 'MELO3C008118.2' => 'cme', 'MELO3C016700.2' => 'cme', 'MELO3C024127.2' => 'cme', 'MELO3C033361.2' => 'cme', 'MELO3C033362.2' => 'cme', 'Migut.C00430' => 'egut', 'Migut.C01246' => 'egut', 'Migut.E00101' => 'egut', 'Migut.H01486' => 'egut', 'Migut.H01939' => 'egut', 'Migut.K00360' => 'egut', 'Migut.M00910' => 'egut', 'Migut.M01139' => 'egut', 'Migut.N02677' => 'egut', 'MSTRG.13252' => 'ama', 'MSTRG.14701' => 'ama', 'MSTRG.1521' => 'ama', 'MSTRG.15884' => 'ama', 'MSTRG.16242' => 'ama', 'MSTRG.22285' => 'ama', 'MSTRG.22444' => 'ama', 'MSTRG.2349' => 'ama', 'MSTRG.26308' => 'ama', 'MSTRG.28296' => 'ama', 'MSTRG.9895' => 'ama', 'Nitab4.5_0000110g0060' => 'nta', 'Nitab4.5_0000420g0130' => 'nta', 'Nitab4.5_0000422g0030' => 'nta', 'Nitab4.5_0000560g0180' => 'nta', 'Nitab4.5_0000703g0100' => 'nta', 'Nitab4.5_0000786g0200' => 'nta', 'Nitab4.5_0001336g0020' => 'nta', 'Nitab4.5_0001796g0030' => 'nta', 'Nitab4.5_0003348g0060' => 'nta', 'Nitab4.5_0003698g0040' => 'nta', 'Nitab4.5_0003942g0090' => 'nta', 'Nitab4.5_0004775g0070' => 'nta', 'Nitab4.5_0004864g0030' => 'nta', 'Nitab4.5_0005615g0020' => 'nta', 'Nitab4.5_0009288g0030' => 'nta', 'Nitab4.5_0009341g0010' => 'nta', 'Nitab4.5_0009535g0010' => 'nta', 'Nn1g03995' => 'nnu', 'Nn1g04100' => 'nnu', 'Nn1g06530' => 'nnu', 'Nn3g16404' => 'nnu', 'Nn3g17212' => 'nnu', 'Nn3g20776' => 'nnu', 'Nn3g21923' => 'nnu', 'Nn5g27737' => 'nnu', 'Nn5g29461' => 'nnu', 'Nn7g38355' => 'nnu', 'Nn8g39873' => 'nnu', 'Oeu000548.2' => 'oeu', 'Oeu004672.1' => 'oeu', 'Oeu015605.2' => 'oeu', 'Oeu016092.1' => 'oeu', 'Oeu017879.3' => 'oeu', 'Oeu024910.1' => 'oeu', 'Oeu028965.1' => 'oeu', 'Oeu031269.1' => 'oeu', 'Oeu031270.1' => 'oeu', 'Oeu032535.1' => 'oeu', 'Oeu034151.1' => 'oeu', 'Oeu034152.1' => 'oeu', 'Oeu034588.2' => 'oeu', 'Oeu050846.1' => 'oeu', 'Oeu050849.2' => 'oeu', 'Oeu051063.2' => 'oeu', 'Oeu052368.1' => 'oeu', 'Oeu052370.1' => 'oeu', 'Os01g0210400' => 'osa', 'Os01g0304300' => 'osa', 'Os01g0749100' => 'osa', 'Os02g0745800' => 'osa', 'Os03g0769050' => 'osa', 'Os05g0531500' => 'osa', 'Os06g0724300' => 'osa', 'Os11g0198100' => 'osa', 'Peaxi162Scf00069g01425' => 'pax', 'Peaxi162Scf00280g00811' => 'pax', 'Peaxi162Scf00310g00615' => 'pax', 'Peaxi162Scf00362g00542' => 'pax', 'Peaxi162Scf00461g00310' => 'pax', 'Peaxi162Scf00530g00118' => 'pax', 'Peaxi162Scf00541g00057' => 'pax', 'Peaxi162Scf00661g00017' => 'pax', 'Peaxi162Scf00926g00027' => 'pax', 'Peaxi162Scf01064g00263' => 'pax', 'Peaxi162Scf01211g00135' => 'pax', 'PGR004G2336' => 'pgr', 'PGR042G0327' => 'pgr', 'PGR042G1957' => 'pgr', 'PGR042G2003' => 'pgr', 'PGR042G3929' => 'pgr', 'PGR083G1137' => 'pgr', 'PGR083G1364' => 'pgr', 'PGSC0003DMG400003381' => 'stu', 'PGSC0003DMG400003417' => 'stu', 'PGSC0003DMG400008981' => 'stu', 'PGSC0003DMG400012417' => 'stu', 'PGSC0003DMG400012823' => 'stu', 'PGSC0003DMG400016885' => 'stu', 'PGSC0003DMG400022812' => 'stu', 'PGSC0003DMG400029726' => 'stu', 'PGSC0003DMG401009243' => 'stu', 'PGSC0003DMG401031505' => 'stu', 'PGSC0003DMG402031505' => 'stu', 'Phvul.001G017600' => 'pvu', 'Phvul.002G193500' => 'pvu', 'Phvul.002G228900' => 'pvu', 'Phvul.002G236800' => 'pvu', 'Phvul.003G049500' => 'pvu', 'Phvul.005G072000' => 'pvu', 'Phvul.006G164800' => 'pvu', 'Phvul.006G185100' => 'pvu', 'Phvul.007G090000' => 'pvu', 'Potri.001G399800' => 'ptr', 'Potri.002G149900' => 'ptr', 'Potri.004G044100' => 'ptr', 'Potri.004G177600' => 'ptr', 'Potri.009G138000' => 'ptr', 'Potri.010G094000' => 'ptr', 'Potri.011G053000' => 'ptr', 'Potri.011G119300' => 'ptr', 'Potri.013G113700' => 'ptr', 'Potri.018G107800' => 'ptr', 'Potri.019G084100' => 'ptr', 'Pp3c14_23720' => 'ppa', 'Pp3c16_6340' => 'ppa', 'Pp3c23_13420' => 'ppa', 'Pp3c24_2740' => 'ppa', 'Pp3c25_860' => 'ppa', 'Pp3c8_21750' => 'ppa', 'Prupe.1G273000' => 'ppe', 'Prupe.1G273700' => 'ppe', 'Prupe.1G274100' => 'ppe', 'Prupe.2G023300' => 'ppe', 'Prupe.4G048000' => 'ppe', 'Prupe.4G080400' => 'ppe', 'Prupe.4G181200' => 'ppe', 'Prupe.8G056900' => 'ppe', 'Prupe.8G168700' => 'ppe', 'Psat1g189080' => 'psa', 'Psat1g204760' => 'psa', 'Psat4g175560' => 'psa', 'Psat4g177720' => 'psa', 'Psat5g244240' => 'psa', 'Psat6g010720' => 'psa', 'Psat6g187200' => 'psa', 'Psat7g072040' => 'psa', 'PSO017G3501' => 'pso', 'PSO063G2148' => 'pso', 'PSO063G5608' => 'pso', 'PSO210G6392' => 'pso', 'PSO541G2319' => 'pso', 'PSO541G2836' => 'pso', 'PSO541G4012' => 'pso', 'PSO541G6253' => 'pso', 'PSO675G0580' => 'pso', 'PSO675G0856' => 'pso', 'PSO675G5635' => 'pso', 'PSO675G9157' => 'pso', 'PSO832G1660' => 'pso', 'PSO832G1969' => 'pso', 'QL02p007186' => 'qlo', 'QL02p033904' => 'qlo', 'QL03p064391' => 'qlo', 'QL05p040593' => 'qlo', 'QL05p058242' => 'qlo', 'QL08p021825' => 'qlo', 'QL11p004981' => 'qlo', 'RcHm_v2.0_Chr1g0318301' => 'rch', 'RcHm_v2.0_Chr4g0418501' => 'rch', 'RcHm_v2.0_Chr4g0439971' => 'rch', 'RcHm_v2.0_Chr5g0008541' => 'rch', 'RcHm_v2.0_Chr5g0014101' => 'rch', 'RcHm_v2.0_Chr5g0014131' => 'rch', 'RcHm_v2.0_Chr5g0033621' => 'rch', 'RcHm_v2.0_Chr6g0272041' => 'rch', 'RcHm_v2.0_Chr6g0278831' => 'rch', 'Rhsim02G0130400' => 'rsi', 'Rhsim02G0171100' => 'rsi', 'Rhsim05G0053000' => 'rsi', 'Rhsim05G0053100' => 'rsi', 'Rhsim06G0096500' => 'rsi', 'Rhsim06G0096600' => 'rsi', 'Rhsim06G0199100' => 'rsi', 'Rhsim12G0062300' => 'rsi', 'Rhsim12G0062800' => 'rsi', 'Sabra02G0118600' => 'sbr', 'Sabra04G0027300' => 'sbr', 'Sabra04G0119500' => 'sbr', 'Sabra08G0112500' => 'sbr', 'Sabra11G0036800' => 'sbr', 'Sabra11G0103800' => 'sbr', 'Sabra13G0096300' => 'sbr', 'Sabra16G0262300' => 'sbr', 'Sabra18G0091700' => 'sbr', 'Sabra19G0095400' => 'sbr', 'SalBow6G3080' => 'sbo', 'SalBow7G1157' => 'sbo', 'SalBow7G2123' => 'sbo', 'SalBow7G2285' => 'sbo', 'SalBow7G3537' => 'sbo', 'SalBow8G2947' => 'sbo', 'SalBow8G4463' => 'sbo', 'SalBow8G5466' => 'sbo', 'Sc01g0001750' => 'sci', 'Sc02g0006640' => 'sci', 'Sc02g0006670' => 'sci', 'Sc04g0008220' => 'sci', 'Sc05g0006190' => 'sci', 'Sc08g0002760' => 'sci', 'Sc17g0006170' => 'sci', 'Sc22g0002050' => 'sci', 'Sc23g0001190' => 'sci', 'Sc24g0000980' => 'sci', 'Sed0006245' => 'sed', 'Sed0007543' => 'sed', 'Sed0009411' => 'sed', 'Sed0010765' => 'sed', 'Sed0012944' => 'sed', 'Sed0014682' => 'sed', 'Sed0016174' => 'sed', 'Sed0016796' => 'sed', 'Sed0020317' => 'sed', 'Sed0021467' => 'sed', 'SEGI_01316' => 'sgi', 'SEGI_03374' => 'sgi', 'SEGI_16265' => 'sgi', 'SEGI_18569' => 'sgi', 'SEGI_20351' => 'sgi', 'SEGI_26395' => 'sgi', 'SEGI_29469' => 'sgi', 'SEGI_34771' => 'sgi', 'SEGI_36769' => 'sgi', 'SEGI_37139' => 'sgi', 'SGA_v2.0_scaffold100G29687' => 'sas', 'SGA_v2.0_scaffold118G32472' => 'sas', 'SGA_v2.0_scaffold14G07051' => 'sas', 'SGA_v2.0_scaffold183G39845' => 'sas', 'SGA_v2.0_scaffold1G00174' => 'sas', 'SGA_v2.0_scaffold22G09714' => 'sas', 'SGA_v2.0_scaffold333G48992' => 'sas', 'SGA_v2.0_scaffold46G17491' => 'sas', 'SGA_v2.0_scaffold49G18294' => 'sas', 'SGA_v2.0_scaffold63G21658' => 'sas', 'SHI01741' => 'shi', 'SHI05771' => 'shi', 'SHI18077' => 'shi', 'SHI20525' => 'shi', 'SHI20527' => 'shi', 'SHI20528' => 'shi', 'SMO172G0185' => 'smo', 'SMO198G0020' => 'smo', 'SMO351G0006' => 'smo', 'SMO356G0118' => 'smo', 'SMO358G0296' => 'smo', 'SMO367G0079' => 'smo', 'SMO367G1277' => 'smo', 'Solyc01g014220.3' => 'sly', 'Solyc01g111770.2' => 'sly', 'Solyc02g078180.3' => 'sly', 'Solyc03g006430.3' => 'sly', 'Solyc03g006456.1' => 'sly', 'Solyc03g079860.2' => 'sly', 'Solyc04g079770.3' => 'sly', 'Solyc05g007430.4' => 'sly', 'Solyc07g063150.3' => 'sly', 'Solyc08g016620.3' => 'sly', 'Solyc09g057590.3' => 'sly', 'Solyc09g057600.1' => 'sly', 'Solyc10g009050.3' => 'sly', 'Solyc11g017420.2' => 'sly', 'Sopen01g053810' => 'spe', 'Sopen02g023040' => 'spe', 'Sopen03g002440' => 'spe', 'Sopen04g033350' => 'spe', 'Sopen05g003310' => 'spe', 'Sopen07g004050' => 'spe', 'Sopen07g031340' => 'spe', 'Sopen08g006990' => 'spe', 'Sopen10g004830' => 'spe', 'Sopen11g009370' => 'spe', 'Sp1g24450' => 'spa', 'Sp1g29670' => 'spa', 'Sp1g39600' => 'spa', 'Sp2g11080' => 'spa', 'Sp2g13970' => 'spa', 'Sp4g16130' => 'spa', 'Sp6g13080' => 'spa', 'Sp7g37270' => 'spa', 'TAR371G0065' => 'tar', 'TAR376G0340' => 'tar', 'TAR376G0435' => 'tar', 'TAR381G0002' => 'tar', 'TAR381G1236' => 'tar', 'TAR624G0055' => 'tar', 'TAR624G0324' => 'tar', 'TAR624G0696' => 'tar', 'TAR624G0906' => 'tar', 'TAR625G0107' => 'tar', 'TAR626G0015' => 'tar', 'TAR626G1356' => 'tar', 'TAR627G0888' => 'tar', 'TAR628G0399' => 'tar', 'TAR628G1327' => 'tar', 'TAR629G2831' => 'tar', 'TAR629G2874' => 'tar', 'TAR633G1432' => 'tar', 'TAR633G2771' => 'tar', 'THA.LOC104803394' => 'tha', 'THA.LOC104805153' => 'tha', 'THA.LOC104806784' => 'tha', 'THA.LOC104810473' => 'tha', 'THA.LOC104813100' => 'tha', 'THA.LOC104814215' => 'tha', 'THA.LOC104815554' => 'tha', 'THA.LOC104820544' => 'tha', 'THA.LOC104824754' => 'tha', 'THA.LOC104827717' => 'tha', 'Thecc.02G031400' => 'tca', 'Thecc.02G055900' => 'tca', 'Thecc.02G350800' => 'tca', 'Thecc.06G150900' => 'tca', 'Thecc.06G186600' => 'tca', 'Thecc.07G089600' => 'tca', 'Thecc.08G020400' => 'tca', 'Thecc.08G182100' => 'tca', 'Thhalv10000873m.g' => 'esa', 'Thhalv10004185m.g' => 'esa', 'Thhalv10006981m.g' => 'esa', 'Thhalv10007204m.g' => 'esa', 'Thhalv10011374m.g' => 'esa', 'Thhalv10013482m.g' => 'esa', 'Thhalv10017801m.g' => 'esa', 'Thhalv10024983m.g' => 'esa', 'TPR.G12072' => 'tpr', 'TPR.G15769' => 'tpr', 'TPR.G16504' => 'tpr', 'TPR.G16506' => 'tpr', 'TPR.G24345' => 'tpr', 'TPR.G26666' => 'tpr', 'TPR.G27320' => 'tpr', 'TPR.G31819' => 'tpr', 'TPR.G38879' => 'tpr', 'TPR.G39015' => 'tpr', 'TPR.G8819' => 'tpr', 'TWI09G0924' => 'twi', 'TWI12G0811' => 'twi', 'TWI12G1294' => 'twi', 'TWI31G0150' => 'twi', 'TWI36G1262' => 'twi', 'TWI38G1287' => 'twi', 'TWI38G1633' => 'twi', 'TWI38G1982' => 'twi', 'TWI39G0116' => 'twi', 'TWI60G1011' => 'twi', 'TWI63G0171' => 'twi', 'TWI73G0839' => 'twi', 'TWI79G1511' => 'twi', 'unitig_0.g915' => 'ugi', 'unitig_0.g916' => 'ugi', 'unitig_21.g20219' => 'ugi', 'unitig_21.g20416' => 'ugi', 'unitig_578.g16132' => 'ugi', 'unitig_578.g16718' => 'ugi', 'unitig_62.g23481' => 'ugi', 'unitig_744.g24535' => 'ugi', 'unitig_749.g13525' => 'ugi', 'vmacro01248' => 'vma', 'vmacro02290' => 'vma', 'vmacro10946' => 'vma', 'vmacro11865' => 'vma', 'vmacro12493' => 'vma', 'vmacro17322' => 'vma', 'vmacro21599' => 'vma', 'vmacro23041' => 'vma', 'VMungo0251G0004' => 'vmu', 'VMungo0251G2639' => 'vmu', 'VMungo0251G2967' => 'vmu', 'VMungo0540G0864' => 'vmu', 'VMungo0540G1569' => 'vmu', 'VMungo0647G0317' => 'vmu', 'VMungo0720G1373' => 'vmu', 'VMungo0720G1508' => 'vmu', 'VMungo1080G0485' => 'vmu', 'VMungo1215G3177' => 'vmu', 'Zm00001eb112600' => 'zma', 'Zm00001eb120220' => 'zma', 'Zm00001eb153240' => 'zma', 'Zm00001eb168880' => 'zma', 'Zm00001eb213920' => 'zma', 'Zm00001eb228280' => 'zma', 'Zm00001eb254580' => 'zma', 'Zm00001eb272180' => 'zma', 'Zm00001eb293190' => 'zma', 'Zm00001eb322930' => 'zma', 'Zm00001eb353360' => 'zma', 'Zm00001eb353390' => 'zma', 'Zm00001eb353430' => 'zma', 'Zm00001eb353440' => 'zma', 'Zm00001eb353780' => 'zma' ), 'gf_id' => 'HOM05D000499', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000499' ), 'data_identifier' => 'HOM05D000499', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000499', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1066', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p29780' => 'bna', 'A02p33180' => 'bna', 'A03p16470' => 'bna', 'A03p66010' => 'bna', 'A04p25970' => 'bna', 'A06p01270' => 'bna', 'A06p46080' => 'bna', 'A07p11400' => 'bna', 'A08p01840' => 'bna', 'A08p08230' => 'bna', 'A08p25740' => 'bna', 'A09p32070' => 'bna', 'A09p37830' => 'bna', 'A09p42840' => 'bna', 'A09p42850' => 'bna', 'Aa31LG10G2060' => 'aar', 'Aa31LG2G7410' => 'aar', 'Aa31LG6G10200' => 'aar', 'Aa31LG6G16680' => 'aar', 'Aa31LG6G8470' => 'aar', 'Aa31LG9G12730' => 'aar', 'Aa31LG9G13680' => 'aar', 'Aa31LG9G14920' => 'aar', 'Aa31LG9G6650' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4977' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5467' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3254' => 'aag', 'Actinidia02578' => 'ach', 'Actinidia07693' => 'ach', 'Actinidia08413' => 'ach', 'Actinidia08414' => 'ach', 'Actinidia15289' => 'ach', 'Actinidia19871' => 'ach', 'Actinidia21475' => 'ach', 'Actinidia22576' => 'ach', 'Actinidia28327' => 'ach', 'Actinidia32491' => 'ach', 'Actinidia39463' => 'ach', 'Actinidia39571' => 'ach', 'Ah.01g013750' => 'amhyb', 'Ah.01g023210' => 'amhyb', 'Ah.04g164850' => 'amhyb', 'Ah.05g178060' => 'amhyb', 'Ah.07g204270' => 'amhyb', 'Ah.07g208480' => 'amhyb', 'Ah.09g237410' => 'amhyb', 'Ah.14g089460' => 'amhyb', 'AL1G41790' => 'aly', 'AL1G49050' => 'aly', 'AL1G53810' => 'aly', 'AL1G61400' => 'aly', 'AL4G18580' => 'aly', 'AL5G12510' => 'aly', 'AL5G12540' => 'aly', 'AL6G43230' => 'aly', 'AL7G10370' => 'aly', 'AL7G19250' => 'aly', 'AL8G12240' => 'aly', 'AL8G18540' => 'aly', 'Aqoxy1G02409' => 'aox', 'Aqoxy2G03993' => 'aox', 'Aqoxy3G03357' => 'aox', 'Aqoxy4G00785' => 'aox', 'Aqoxy5G02598' => 'aox', 'Aqoxy6G00132' => 'aox', 'Aqoxy7G01776' => 'aox', 'Aqoxy7G02316' => 'aox', 'Aqoxy7G03973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.12AFKW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B8730' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27IQR1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3F75VG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3RE0GA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41TCQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.527VTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FIR39' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5W8UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DA38EV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ63HS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H1I32C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HC27T5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4M8AP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7N3CZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9UVDZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LS1NQA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT1D4B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SKC4TM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCFV76' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF9Q1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQWD9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1ZM88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WE07RT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YCK7VH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJE6Q6' => 'arhy', 'AT1G28240' => 'ath', 'AT1G34550' => 'ath', 'AT1G53040' => 'ath', 'AT2G02910' => 'ath', 'AT4G09630' => 'ath', 'AT4G38500' => 'ath', 'AT5G42660' => 'ath', 'AT5G46220' => 'ath', 'ATR0152G026' => 'atr', 'ATR0564G343' => 'atr', 'ATR0706G151' => 'atr', 'ATR0733G207' => 'atr', 'ATR0751G234' => 'atr', 'ATR0807G048' => 'atr', 'ATR1091G084' => 'atr', 'Atru.chr10.1229' => 'acertr', 'Atru.chr10.1230' => 'acertr', 'Atru.chr10.1874' => 'acertr', 'Atru.chr11.1808' => 'acertr', 'Atru.chr13.1795' => 'acertr', 'Atru.chr13.570' => 'acertr', 'Atru.chr2.2608' => 'acertr', 'Atru.chr2.2609' => 'acertr', 'Atru.chr5.3428' => 'acertr', 'Atru.chr8.1171' => 'acertr', 'AUR62004651' => 'cqu', 'AUR62008675' => 'cqu', 'AUR62010014' => 'cqu', 'AUR62013004' => 'cqu', 'AUR62014825' => 'cqu', 'AUR62015015' => 'cqu', 'AUR62015151' => 'cqu', 'AUR62017020' => 'cqu', 'AUR62019422' => 'cqu', 'AUR62023570' => 'cqu', 'AUR62025571' => 'cqu', 'AUR62029098' => 'cqu', 'AUR62033863' => 'cqu', 'AUR62034296' => 'cqu', 'AUR62040075' => 'cqu', 'BcaB02g07334' => 'bca', 'BcaB02g10575' => 'bca', 'BcaB03g12119' => 'bca', 'BcaB03g12120' => 'bca', 'BcaB03g13945' => 'bca', 'BcaB04g17123' => 'bca', 'BcaB04g17867' => 'bca', 'BcaB04g19839' => 'bca', 'BcaB07g30317' => 'bca', 'BcaB07g32432' => 'bca', 'BcaB07g33362' => 'bca', 'BcaB08g36611' => 'bca', 'BcaC01g00028' => 'bca', 'BcaC01g01356' => 'bca', 'BcaC01g02034' => 'bca', 'BcaC01g06051' => 'bca', 'BcaC03g16839' => 'bca', 'BcaC03g17176' => 'bca', 'BcaC05g26829' => 'bca', 'BcaC06g31490' => 'bca', 'BcaC06g35344' => 'bca', 'BcaC06g36570' => 'bca', 'BcaC07g37537' => 'bca', 'BcaC08g43491' => 'bca', 'BcaC08g43773' => 'bca', 'BcaNung00234' => 'bca', 'BcaNung01982' => 'bca', 'BcaNung03707' => 'bca', 'BcaNung06454' => 'bca', 'BolC2t10762H' => 'bol', 'BolC2t11191H' => 'bol', 'BolC3t14322H' => 'bol', 'BolC3t19747H' => 'bol', 'BolC3t21425H' => 'bol', 'BolC4t27800H' => 'bol', 'BolC5t31423H' => 'bol', 'BolC6t35951H' => 'bol', 'BolC6t36282H' => 'bol', 'BolC7t40678H' => 'bol', 'BolC7t40679H' => 'bol', 'BolC7t42222H' => 'bol', 'BolC7t43492H' => 'bol', 'BolC7t46785H' => 'bol', 'BolC8t47853H' => 'bol', 'BolC9t56805H' => 'bol', 'BraA02t08000Z' => 'bra', 'BraA02t08341Z' => 'bra', 'BraA03t10936Z' => 'bra', 'BraA03t15657Z' => 'bra', 'BraA04t18100Z' => 'bra', 'BraA05t20523Z' => 'bra', 'BraA06t23353Z' => 'bra', 'BraA06t27473Z' => 'bra', 'BraA06t27769Z' => 'bra', 'BraA07t28928Z' => 'bra', 'BraA08t32236Z' => 'bra', 'BraA08t32841Z' => 'bra', 'BraA08t34524Z' => 'bra', 'BraA09t38742Z' => 'bra', 'BraA09t39295Z' => 'bra', 'C02p47180' => 'bna', 'C02p50990' => 'bna', 'C03p19360' => 'bna', 'C03p74950' => 'bna', 'C03p91000' => 'bna', 'C04p63260' => 'bna', 'C05p27050' => 'bna', 'C06p08750' => 'bna', 'C06p11490' => 'bna', 'C07p02820' => 'bna', 'C07p17180' => 'bna', 'C07p29440' => 'bna', 'C07p63730' => 'bna', 'C09p39260' => 'bna', 'CAN.G1164.34' => 'can', 'CAN.G1164.39' => 'can', 'CAN.G1530.3' => 'can', 'CAN.G162.61' => 'can', 'CAN.G176.6' => 'can', 'CAN.G289.49' => 'can', 'CAN.G370.21' => 'can', 'CAN.G370.22' => 'can', 'CAN.G371.117' => 'can', 'CAN.G58.37' => 'can', 'CAN.G588.98' => 'can', 'CANSAT21G2266' => 'cansat', 'CANSAT25G2799' => 'cansat', 'CANSAT35G0862' => 'cansat', 'CANSAT35G1704' => 'cansat', 'CANSAT35G1760' => 'cansat', 'CANSAT56G3971' => 'cansat', 'CANSAT56G4116' => 'cansat', 'CANSAT80G1259' => 'cansat', 'CARHR027730' => 'chi', 'CARHR033880' => 'chi', 'CARHR043270' => 'chi', 'CARHR145330' => 'chi', 'CARHR145340' => 'chi', 'CARHR175570' => 'chi', 'CARHR181570' => 'chi', 'CARHR258470' => 'chi', 'CARHR260490' => 'chi', 'CARHR294220' => 'chi', 'Carub.0001s2668' => 'cru', 'Carub.0001s3257' => 'cru', 'Carub.0001s4220' => 'cru', 'Carub.0005s0179' => 'cru', 'Carub.0006s2807' => 'cru', 'Carub.0007s0039' => 'cru', 'Carub.0008s0169' => 'cru', 'Carub.0008s0636' => 'cru', 'Ca_00338_v3' => 'car', 'Ca_00542_v3' => 'car', 'Ca_01844_v3' => 'car', 'Ca_10611_v3' => 'car', 'Ca_13326_v3' => 'car', 'Ca_17944_v3' => 'car', 'Ca_18546_v3' => 'car', 'Ca_24219_v3' => 'car', 'Ca_29972_v3' => 'car', 'CBR_g3681' => 'cbr', 'CBR_g40021' => 'cbr', 'Cc01_g08140' => 'ccan', 'Cc02_g13410' => 'ccan', 'Cc02_g37480' => 'ccan', 'Cc05_g12030' => 'ccan', 'Cc09_g03370' => 'ccan', 'Cc09_g10300' => 'ccan', 'Cc10_g03530' => 'ccan', 'Cc10_g11380' => 'ccan', 'CDE01G0176' => 'cde', 'CDE02G0675' => 'cde', 'CDE02G0942' => 'cde', 'CDE02G1153' => 'cde', 'CDE02G4177' => 'cde', 'CDE04G2117' => 'cde', 'CDE04G2736' => 'cde', 'CDE08G1161' => 'cde', 'CDE09G1238' => 'cde', 'Cfa000467' => 'cfa', 'Cfa000947' => 'cfa', 'Cfa004969' => 'cfa', 'Cfa005284' => 'cfa', 'Cfa008993' => 'cfa', 'Cfa018187' => 'cfa', 'Cfa018454' => 'cfa', 'Cfa020585' => 'cfa', 'Ciclev10000424m.g' => 'ccl', 'Ciclev10003605m.g' => 'ccl', 'Ciclev10007828m.g' => 'ccl', 'Ciclev10014620m.g' => 'ccl', 'Ciclev10015169m.g' => 'ccl', 'Ciclev10018291m.g' => 'ccl', 'Ciclev10028256m.g' => 'ccl', 'Ciclev10033822m.g' => 'ccl', 'CiPaw.05G060300' => 'cil', 'CiPaw.05G085000' => 'cil', 'CiPaw.06G083700' => 'cil', 'CiPaw.06G120300' => 'cil', 'CiPaw.09G060500' => 'cil', 'CiPaw.09G123800' => 'cil', 'CiPaw.11G169700' => 'cil', 'CiPaw.12G118300' => 'cil', 'CiPaw.15G071000' => 'cil', 'CiPaw.15G081900' => 'cil', 'ClCG01G024610' => 'cla', 'ClCG03G006070' => 'cla', 'ClCG05G019250' => 'cla', 'ClCG09G009500' => 'cla', 'ClCG11G008200' => 'cla', 'ClCG11G018080' => 'cla', 'COL.COLO4_17373' => 'col', 'COL.COLO4_22994' => 'col', 'COL.COLO4_26389' => 'col', 'COL.COLO4_27170' => 'col', 'COL.COLO4_31074' => 'col', 'COL.COLO4_31465' => 'col', 'COL.COLO4_36438' => 'col', 'COL.COLO4_36439' => 'col', 'Cpa.g.c38781' => 'cpa', 'Cpa.g.sc128.12' => 'cpa', 'Cpa.g.sc166.7' => 'cpa', 'Cpa.g.sc166.8' => 'cpa', 'Cpa.g.sc20.111' => 'cpa', 'Cpa.g.sc27.31' => 'cpa', 'Cpa.g.sc64.36' => 'cpa', 'Cpa.g.sc64.37' => 'cpa', 'Cpa.g.sc66.49' => 'cpa', 'Cpa.g.sc80.64' => 'cpa', 'CsaV3_1G012320' => 'csa', 'CsaV3_2G008480' => 'csa', 'CsaV3_2G033450' => 'csa', 'CsaV3_3G044830' => 'csa', 'CsaV3_4G033710' => 'csa', 'CsaV3_6G051730' => 'csa', 'CsaV3_7G025350' => 'csa', 'CSS0001067' => 'camsi', 'CSS0005996' => 'camsi', 'CSS0006590' => 'camsi', 'CSS0009673' => 'camsi', 'CSS0010201' => 'camsi', 'CSS0010549' => 'camsi', 'CSS0011364' => 'camsi', 'CSS0014473' => 'camsi', 'CSS0014961' => 'camsi', 'CSS0020191' => 'camsi', 'CSS0021165' => 'camsi', 'CSS0022306' => 'camsi', 'CSS0030591' => 'camsi', 'CSS0030696' => 'camsi', 'CSS0032653' => 'camsi', 'CSS0037487' => 'camsi', 'CSS0041102' => 'camsi', 'CSS0041261' => 'camsi', 'CSS0046246' => 'camsi', 'CSS0049256' => 'camsi', 'DCAR_004075' => 'dca', 'DCAR_011538' => 'dca', 'DCAR_019553' => 'dca', 'DCAR_020952' => 'dca', 'DCAR_021739' => 'dca', 'DCAR_027407' => 'dca', 'DCAR_027913' => 'dca', 'DCAR_028066' => 'dca', 'Dinv05899' => 'din', 'Dinv07563' => 'din', 'Dinv08010' => 'din', 'Dinv14125' => 'din', 'Dinv20172' => 'din', 'Dinv30743' => 'din', 'Dinv31229' => 'din', 'Dinv34162' => 'din', 'Dinv36028' => 'din', 'Dinv39368' => 'din', 'Dinv40565' => 'din', 'Dinv41706' => 'din', 'Duzib052G0089' => 'dzi', 'Duzib116G0641' => 'dzi', 'Duzib132G0069' => 'dzi', 'Duzib132G1219' => 'dzi', 'Duzib147G0278' => 'dzi', 'Duzib160G0480' => 'dzi', 'Duzib170G0661' => 'dzi', 'Duzib177G0591' => 'dzi', 'Duzib187G1353' => 'dzi', 'Duzib192G0858' => 'dzi', 'Duzib192G0883' => 'dzi', 'Duzib213G0506' => 'dzi', 'Duzib235G0289' => 'dzi', 'Duzib251G0422' => 'dzi', 'ECA232G3898' => 'eca', 'ECA233G5950' => 'eca', 'ECA234G1699' => 'eca', 'ECA234G2421' => 'eca', 'ECA236G0426' => 'eca', 'ECA236G4331' => 'eca', 'ECA248G2573' => 'eca', 'EL10Ac1g00077' => 'bvu', 'EL10Ac1g01746' => 'bvu', 'EL10Ac2g03464' => 'bvu', 'EL10Ac4g08176' => 'bvu', 'EL10Ac7g17521' => 'bvu', 'EL10Ac8g20386' => 'bvu', 'EL10Ac9g21343' => 'bvu', 'EL10Ac9g22688' => 'bvu', 'Eucgr.B03434' => 'egr', 'Eucgr.D00618' => 'egr', 'Eucgr.E02395' => 'egr', 'Eucgr.F01129' => 'egr', 'Eucgr.F02622' => 'egr', 'Eucgr.F04207' => 'egr', 'FAN01G0570' => 'fan', 'FAN03G3351' => 'fan', 'FAN06G3702' => 'fan', 'FAN07G2149' => 'fan', 'FAN10G3758' => 'fan', 'FAN11G1170' => 'fan', 'FAN11G2050' => 'fan', 'FAN11G2724' => 'fan', 'FAN12G1700' => 'fan', 'FAN12G2028' => 'fan', 'FAN15G1160' => 'fan', 'FAN15G3063' => 'fan', 'FAN16G2540' => 'fan', 'FAN16G3077' => 'fan', 'FAN16G3624' => 'fan', 'FAN17G0221' => 'fan', 'FAN20G2492' => 'fan', 'FAN20G2905' => 'fan', 'FAN21G0548' => 'fan', 'FAN21G1300' => 'fan', 'FAN22G0077' => 'fan', 'FAN22G1315' => 'fan', 'FAN24G1280' => 'fan', 'FAN24G1445' => 'fan', 'FAN24G3527' => 'fan', 'FAN25G0464' => 'fan', 'FAN25G2885' => 'fan', 'FAN25G3270' => 'fan', 'FAN27G1101' => 'fan', 'FAN27G2846' => 'fan', 'FAN27G3524' => 'fan', 'FvH4_2g11770' => 'fve', 'FvH4_2g15630' => 'fve', 'FvH4_3g05570' => 'fve', 'FvH4_3g09110' => 'fve', 'FvH4_3g19940' => 'fve', 'FvH4_4g04821' => 'fve', 'FvH4_4g31480' => 'fve', 'FvH4_7g01740' => 'fve', 'Glyma.05G130400' => 'gma', 'Glyma.05G156400' => 'gma', 'Glyma.07G197000' => 'gma', 'Glyma.08G085151' => 'gma', 'Glyma.08G114500' => 'gma', 'Glyma.08G300400' => 'gma', 'Glyma.10G215800' => 'gma', 'Glyma.12G224400' => 'gma', 'Glyma.13G179300' => 'gma', 'Glyma.13G218151' => 'gma', 'Glyma.13G238800' => 'gma', 'Glyma.13G276900' => 'gma', 'Glyma.14G078200' => 'gma', 'Glyma.15G074500' => 'gma', 'Glyma.15G094100' => 'gma', 'Glyma.17G247200' => 'gma', 'Glyma.18G120100' => 'gma', 'Glyma.20G176000' => 'gma', 'Gohir.A01G063600' => 'ghi', 'Gohir.A01G170301' => 'ghi', 'Gohir.A02G060500' => 'ghi', 'Gohir.A05G133850' => 'ghi', 'Gohir.A05G161400' => 'ghi', 'Gohir.A06G012900' => 'ghi', 'Gohir.A06G035901' => 'ghi', 'Gohir.A06G127100' => 'ghi', 'Gohir.A06G210500' => 'ghi', 'Gohir.A08G008650' => 'ghi', 'Gohir.A09G072700' => 'ghi', 'Gohir.A09G088301' => 'ghi', 'Gohir.A10G040600' => 'ghi', 'Gohir.A12G036300' => 'ghi', 'Gohir.A12G143350' => 'ghi', 'Gohir.A12G165500' => 'ghi', 'Gohir.A13G145700' => 'ghi', 'Gohir.D01G050000' => 'ghi', 'Gohir.D01G051366' => 'ghi', 'Gohir.D01G161350' => 'ghi', 'Gohir.D02G065900' => 'ghi', 'Gohir.D05G164200' => 'ghi', 'Gohir.D05G355500' => 'ghi', 'Gohir.D06G010400' => 'ghi', 'Gohir.D06G111250' => 'ghi', 'Gohir.D06G132000' => 'ghi', 'Gohir.D06G210500' => 'ghi', 'Gohir.D07G165675' => 'ghi', 'Gohir.D08G062240' => 'ghi', 'Gohir.D08G086101' => 'ghi', 'Gohir.D08G138060' => 'ghi', 'Gohir.D09G072300' => 'ghi', 'Gohir.D10G041400' => 'ghi', 'Gohir.D11G191020' => 'ghi', 'Gohir.D11G212066' => 'ghi', 'Gohir.D12G036300' => 'ghi', 'Gohir.D12G168600' => 'ghi', 'Gohir.D13G150600' => 'ghi', 'Gorai.001G057300' => 'gra', 'Gorai.002G069900' => 'gra', 'Gorai.002G200000' => 'gra', 'Gorai.003G067600' => 'gra', 'Gorai.005G074800' => 'gra', 'Gorai.006G087300' => 'gra', 'Gorai.008G037500' => 'gra', 'Gorai.008G181400' => 'gra', 'Gorai.009G169400' => 'gra', 'Gorai.009G387900' => 'gra', 'Gorai.010G013300' => 'gra', 'Gorai.010G153800' => 'gra', 'Gorai.010G255800' => 'gra', 'Gorai.011G043700' => 'gra', 'Gorai.011G198900' => 'gra', 'Gorai.013G168400' => 'gra', 'GSVIVG01005212001' => 'vvi', 'GSVIVG01006163001' => 'vvi', 'GSVIVG01009625001' => 'vvi', 'GSVIVG01014338001' => 'vvi', 'GSVIVG01020005001' => 'vvi', 'GSVIVG01021450001' => 'vvi', 'GSVIVG01023975001' => 'vvi', 'GSVIVG01034490001' => 'vvi', 'HanXRQChr04g0112071' => 'han', 'HanXRQChr05g0131151' => 'han', 'HanXRQChr09g0262371' => 'han', 'HanXRQChr09g0268401' => 'han', 'HanXRQChr10g0279241' => 'han', 'HanXRQChr10g0297961' => 'han', 'HanXRQChr11g0326231' => 'han', 'HanXRQChr11g0328471' => 'han', 'HanXRQChr16g0507941' => 'han', 'HanXRQChr17g0560211' => 'han', 'Haze_02108' => 'cav', 'Haze_02428' => 'cav', 'Haze_05593' => 'cav', 'Haze_06448' => 'cav', 'Haze_09427' => 'cav', 'Haze_12022' => 'cav', 'Haze_17612' => 'cav', 'Haze_17928' => 'cav', 'Hma1.2p1_0032F.1_g019250' => 'hma', 'Hma1.2p1_0163F.1_g072690' => 'hma', 'Hma1.2p1_0265F.1_g106710' => 'hma', 'Hma1.2p1_0286F.1_g113970' => 'hma', 'Hma1.2p1_0363F.1_g136640' => 'hma', 'Hma1.2p1_0584F.1_g183470' => 'hma', 'Hma1.2p1_0885F.1_g232570' => 'hma', 'HPP92_006022' => 'vpl', 'HPP92_007320' => 'vpl', 'HPP92_011521' => 'vpl', 'HPP92_019387' => 'vpl', 'HPP92_024038' => 'vpl', 'Hund05891' => 'sun', 'Hund06450' => 'sun', 'Hund12053' => 'sun', 'Hund16800' => 'sun', 'Hund21222' => 'sun', 'Hund22896' => 'sun', 'Hund23746' => 'sun', 'Hund27083' => 'sun', 'Lalb_Chr02g0141831' => 'lal', 'Lalb_Chr02g0141841' => 'lal', 'Lalb_Chr05g0220411' => 'lal', 'Lalb_Chr06g0162081' => 'lal', 'Lalb_Chr09g0327651' => 'lal', 'Lalb_Chr13g0295051' => 'lal', 'Lalb_Chr15g0086801' => 'lal', 'Lalb_Chr16g0383781' => 'lal', 'Lalb_Chr16g0383791' => 'lal', 'Lalb_Chr18g0055441' => 'lal', 'Lalb_Chr18g0059611' => 'lal', 'Lalb_Chr20g0109661' => 'lal', 'Lalb_Chr20g0109831' => 'lal', 'Lalb_Chr20g0121871' => 'lal', 'Lalb_Chr22g0355361' => 'lal', 'Lalb_Chr25g0286371' => 'lal', 'Lj1A1187G43' => 'lonja', 'Lj1A1205T50' => 'lonja', 'Lj1A800G33' => 'lonja', 'Lj1C1187T7' => 'lonja', 'Lj1C843T11' => 'lonja', 'Lj1g0010940' => 'lja', 'Lj2A288T69' => 'lonja', 'Lj3g0024276' => 'lja', 'Lj4A47T76' => 'lonja', 'Lj4g0005805' => 'lja', 'Lj4g0006097' => 'lja', 'Lj4g0008528' => 'lja', 'Lj4g0024907' => 'lja', 'Lj5g0012472' => 'lja', 'Lj5g0018648' => 'lja', 'Lj6C789G1' => 'lonja', 'Lj6g0004000' => 'lja', 'Lj7A292G67' => 'lonja', 'Lj7A292T64' => 'lonja', 'Lj9A400T58' => 'lonja', 'Lsat_1_v5_gn_1_126181' => 'lsa', 'Lsat_1_v5_gn_4_123041' => 'lsa', 'Lsat_1_v5_gn_4_133620' => 'lsa', 'Lsat_1_v5_gn_4_53221' => 'lsa', 'Lsat_1_v5_gn_4_71961' => 'lsa', 'Lsat_1_v5_gn_7_105241' => 'lsa', 'Lsat_1_v5_gn_7_21361' => 'lsa', 'Lsat_1_v5_gn_7_28860' => 'lsa', 'Lsat_1_v5_gn_7_31260' => 'lsa', 'Lsat_1_v5_gn_8_52801' => 'lsa', 'Manes.02G191400' => 'mes', 'Manes.03G110100' => 'mes', 'Manes.04G071100' => 'mes', 'Manes.05G100500' => 'mes', 'Manes.05G164700' => 'mes', 'Manes.15G087000' => 'mes', 'Manes.15G121500' => 'mes', 'Manes.16G028300' => 'mes', 'Manes.17G046100' => 'mes', 'Manes.17G069800' => 'mes', 'Manes.18G100500' => 'mes', 'Mapoly0002s0109' => 'mpo', 'Mapoly0024s0007' => 'mpo', 'Mapoly0089s0032' => 'mpo', 'MBI04_g42241_MAGBIO' => 'mbi', 'MBI05_g11988_MAGBIO' => 'mbi', 'MBI05_g35452_MAGBIO' => 'mbi', 'MBI07_g30179_MAGBIO' => 'mbi', 'MBI07_g35859_MAGBIO' => 'mbi', 'MBI07_g35860_MAGBIO' => 'mbi', 'MBI07_g37166_MAGBIO' => 'mbi', 'MBI08_g18172_MAGBIO' => 'mbi', 'MBI09_g08441_MAGBIO' => 'mbi', 'MBI13_g01676_MAGBIO' => 'mbi', 'MBI14_g42955_MAGBIO' => 'mbi', 'MBI16_g13161_MAGBIO' => 'mbi', 'MBI17_g27204_MAGBIO' => 'mbi', 'MBI19_g21595_MAGBIO' => 'mbi', 'MD00G1148400' => 'mdo', 'MD02G1301200' => 'mdo', 'MD03G1227800' => 'mdo', 'MD05G1041100' => 'mdo', 'MD05G1124800' => 'mdo', 'MD05G1284000' => 'mdo', 'MD05G1338800' => 'mdo', 'MD05G1338900' => 'mdo', 'MD07G1022800' => 'mdo', 'MD10G1047500' => 'mdo', 'MD10G1127500' => 'mdo', 'MD10G1262300' => 'mdo', 'MD10G1293800' => 'mdo', 'MD16G1074300' => 'mdo', 'Medtr1g021670' => 'mtr', 'Medtr1g096320' => 'mtr', 'Medtr2g013690' => 'mtr', 'Medtr2g019450' => 'mtr', 'Medtr2g085170' => 'mtr', 'Medtr4g088785' => 'mtr', 'Medtr8g055930' => 'mtr', 'Medtr8g085850' => 'mtr', 'MELO3C002605.2' => 'cme', 'MELO3C003891.2' => 'cme', 'MELO3C004012.2' => 'cme', 'MELO3C007134.2' => 'cme', 'MELO3C008118.2' => 'cme', 'MELO3C016700.2' => 'cme', 'MELO3C024127.2' => 'cme', 'MELO3C033361.2' => 'cme', 'MELO3C033362.2' => 'cme', 'Migut.C00430' => 'egut', 'Migut.C01246' => 'egut', 'Migut.E00101' => 'egut', 'Migut.H01486' => 'egut', 'Migut.H01939' => 'egut', 'Migut.K00360' => 'egut', 'Migut.M00910' => 'egut', 'Migut.M01139' => 'egut', 'Migut.N02677' => 'egut', 'MSTRG.13252' => 'ama', 'MSTRG.14701' => 'ama', 'MSTRG.1521' => 'ama', 'MSTRG.15884' => 'ama', 'MSTRG.16242' => 'ama', 'MSTRG.22285' => 'ama', 'MSTRG.22444' => 'ama', 'MSTRG.2349' => 'ama', 'MSTRG.26308' => 'ama', 'MSTRG.28296' => 'ama', 'MSTRG.9895' => 'ama', 'Nitab4.5_0000110g0060' => 'nta', 'Nitab4.5_0000420g0130' => 'nta', 'Nitab4.5_0000422g0030' => 'nta', 'Nitab4.5_0000560g0180' => 'nta', 'Nitab4.5_0000703g0100' => 'nta', 'Nitab4.5_0000786g0200' => 'nta', 'Nitab4.5_0001336g0020' => 'nta', 'Nitab4.5_0001796g0030' => 'nta', 'Nitab4.5_0003348g0060' => 'nta', 'Nitab4.5_0003698g0040' => 'nta', 'Nitab4.5_0003942g0090' => 'nta', 'Nitab4.5_0004775g0070' => 'nta', 'Nitab4.5_0004864g0030' => 'nta', 'Nitab4.5_0005615g0020' => 'nta', 'Nitab4.5_0009288g0030' => 'nta', 'Nitab4.5_0009341g0010' => 'nta', 'Nitab4.5_0009535g0010' => 'nta', 'Nn1g03995' => 'nnu', 'Nn1g04100' => 'nnu', 'Nn1g06530' => 'nnu', 'Nn3g16404' => 'nnu', 'Nn3g17212' => 'nnu', 'Nn3g20776' => 'nnu', 'Nn3g21923' => 'nnu', 'Nn5g27737' => 'nnu', 'Nn5g29461' => 'nnu', 'Nn7g38355' => 'nnu', 'Nn8g39873' => 'nnu', 'Oeu000548.2' => 'oeu', 'Oeu004672.1' => 'oeu', 'Oeu015605.2' => 'oeu', 'Oeu016092.1' => 'oeu', 'Oeu017879.3' => 'oeu', 'Oeu024910.1' => 'oeu', 'Oeu028965.1' => 'oeu', 'Oeu031269.1' => 'oeu', 'Oeu031270.1' => 'oeu', 'Oeu032535.1' => 'oeu', 'Oeu034151.1' => 'oeu', 'Oeu034152.1' => 'oeu', 'Oeu034588.2' => 'oeu', 'Oeu050846.1' => 'oeu', 'Oeu050849.2' => 'oeu', 'Oeu051063.2' => 'oeu', 'Oeu052368.1' => 'oeu', 'Oeu052370.1' => 'oeu', 'Os01g0210400' => 'osa', 'Os01g0304300' => 'osa', 'Os01g0749100' => 'osa', 'Os02g0745800' => 'osa', 'Os03g0769050' => 'osa', 'Os05g0531500' => 'osa', 'Os06g0724300' => 'osa', 'Os11g0198100' => 'osa', 'Peaxi162Scf00069g01425' => 'pax', 'Peaxi162Scf00280g00811' => 'pax', 'Peaxi162Scf00310g00615' => 'pax', 'Peaxi162Scf00362g00542' => 'pax', 'Peaxi162Scf00461g00310' => 'pax', 'Peaxi162Scf00530g00118' => 'pax', 'Peaxi162Scf00541g00057' => 'pax', 'Peaxi162Scf00661g00017' => 'pax', 'Peaxi162Scf00926g00027' => 'pax', 'Peaxi162Scf01064g00263' => 'pax', 'Peaxi162Scf01211g00135' => 'pax', 'PGR004G2336' => 'pgr', 'PGR042G0327' => 'pgr', 'PGR042G1957' => 'pgr', 'PGR042G2003' => 'pgr', 'PGR042G3929' => 'pgr', 'PGR083G1137' => 'pgr', 'PGR083G1364' => 'pgr', 'PGSC0003DMG400003381' => 'stu', 'PGSC0003DMG400003417' => 'stu', 'PGSC0003DMG400008981' => 'stu', 'PGSC0003DMG400012417' => 'stu', 'PGSC0003DMG400012823' => 'stu', 'PGSC0003DMG400016885' => 'stu', 'PGSC0003DMG400022812' => 'stu', 'PGSC0003DMG400029726' => 'stu', 'PGSC0003DMG401009243' => 'stu', 'PGSC0003DMG401031505' => 'stu', 'PGSC0003DMG402031505' => 'stu', 'Phvul.001G017600' => 'pvu', 'Phvul.002G193500' => 'pvu', 'Phvul.002G228900' => 'pvu', 'Phvul.002G236800' => 'pvu', 'Phvul.003G049500' => 'pvu', 'Phvul.005G072000' => 'pvu', 'Phvul.006G164800' => 'pvu', 'Phvul.006G185100' => 'pvu', 'Phvul.007G090000' => 'pvu', 'Potri.001G399800' => 'ptr', 'Potri.002G149900' => 'ptr', 'Potri.004G044100' => 'ptr', 'Potri.004G177600' => 'ptr', 'Potri.009G138000' => 'ptr', 'Potri.010G094000' => 'ptr', 'Potri.011G053000' => 'ptr', 'Potri.011G119300' => 'ptr', 'Potri.013G113700' => 'ptr', 'Potri.018G107800' => 'ptr', 'Potri.019G084100' => 'ptr', 'Pp3c14_23720' => 'ppa', 'Pp3c16_6340' => 'ppa', 'Pp3c23_13420' => 'ppa', 'Pp3c24_2740' => 'ppa', 'Pp3c25_860' => 'ppa', 'Pp3c8_21750' => 'ppa', 'Prupe.1G273000' => 'ppe', 'Prupe.1G273700' => 'ppe', 'Prupe.1G274100' => 'ppe', 'Prupe.2G023300' => 'ppe', 'Prupe.4G048000' => 'ppe', 'Prupe.4G080400' => 'ppe', 'Prupe.4G181200' => 'ppe', 'Prupe.8G056900' => 'ppe', 'Prupe.8G168700' => 'ppe', 'Psat1g189080' => 'psa', 'Psat1g204760' => 'psa', 'Psat4g175560' => 'psa', 'Psat4g177720' => 'psa', 'Psat5g244240' => 'psa', 'Psat6g010720' => 'psa', 'Psat6g187200' => 'psa', 'Psat7g072040' => 'psa', 'PSO017G3501' => 'pso', 'PSO063G2148' => 'pso', 'PSO063G5608' => 'pso', 'PSO210G6392' => 'pso', 'PSO541G2319' => 'pso', 'PSO541G2836' => 'pso', 'PSO541G4012' => 'pso', 'PSO541G6253' => 'pso', 'PSO675G0580' => 'pso', 'PSO675G0856' => 'pso', 'PSO675G5635' => 'pso', 'PSO675G9157' => 'pso', 'PSO832G1660' => 'pso', 'PSO832G1969' => 'pso', 'QL02p007186' => 'qlo', 'QL02p033904' => 'qlo', 'QL03p064391' => 'qlo', 'QL05p040593' => 'qlo', 'QL05p058242' => 'qlo', 'QL08p021825' => 'qlo', 'QL11p004981' => 'qlo', 'RcHm_v2.0_Chr1g0318301' => 'rch', 'RcHm_v2.0_Chr4g0418501' => 'rch', 'RcHm_v2.0_Chr4g0439971' => 'rch', 'RcHm_v2.0_Chr5g0008541' => 'rch', 'RcHm_v2.0_Chr5g0014101' => 'rch', 'RcHm_v2.0_Chr5g0014131' => 'rch', 'RcHm_v2.0_Chr5g0033621' => 'rch', 'RcHm_v2.0_Chr6g0272041' => 'rch', 'RcHm_v2.0_Chr6g0278831' => 'rch', 'Rhsim02G0130400' => 'rsi', 'Rhsim02G0171100' => 'rsi', 'Rhsim05G0053000' => 'rsi', 'Rhsim05G0053100' => 'rsi', 'Rhsim06G0096500' => 'rsi', 'Rhsim06G0096600' => 'rsi', 'Rhsim06G0199100' => 'rsi', 'Rhsim12G0062300' => 'rsi', 'Rhsim12G0062800' => 'rsi', 'Sabra02G0118600' => 'sbr', 'Sabra04G0027300' => 'sbr', 'Sabra04G0119500' => 'sbr', 'Sabra08G0112500' => 'sbr', 'Sabra11G0036800' => 'sbr', 'Sabra11G0103800' => 'sbr', 'Sabra13G0096300' => 'sbr', 'Sabra16G0262300' => 'sbr', 'Sabra18G0091700' => 'sbr', 'Sabra19G0095400' => 'sbr', 'SalBow6G3080' => 'sbo', 'SalBow7G1157' => 'sbo', 'SalBow7G2123' => 'sbo', 'SalBow7G2285' => 'sbo', 'SalBow7G3537' => 'sbo', 'SalBow8G2947' => 'sbo', 'SalBow8G4463' => 'sbo', 'SalBow8G5466' => 'sbo', 'Sc01g0001750' => 'sci', 'Sc02g0006640' => 'sci', 'Sc02g0006670' => 'sci', 'Sc04g0008220' => 'sci', 'Sc05g0006190' => 'sci', 'Sc08g0002760' => 'sci', 'Sc17g0006170' => 'sci', 'Sc22g0002050' => 'sci', 'Sc23g0001190' => 'sci', 'Sc24g0000980' => 'sci', 'Sed0006245' => 'sed', 'Sed0007543' => 'sed', 'Sed0009411' => 'sed', 'Sed0010765' => 'sed', 'Sed0012944' => 'sed', 'Sed0014682' => 'sed', 'Sed0016174' => 'sed', 'Sed0016796' => 'sed', 'Sed0020317' => 'sed', 'Sed0021467' => 'sed', 'SEGI_01316' => 'sgi', 'SEGI_03374' => 'sgi', 'SEGI_16265' => 'sgi', 'SEGI_18569' => 'sgi', 'SEGI_20351' => 'sgi', 'SEGI_26395' => 'sgi', 'SEGI_29469' => 'sgi', 'SEGI_34771' => 'sgi', 'SEGI_36769' => 'sgi', 'SEGI_37139' => 'sgi', 'SGA_v2.0_scaffold100G29687' => 'sas', 'SGA_v2.0_scaffold118G32472' => 'sas', 'SGA_v2.0_scaffold14G07051' => 'sas', 'SGA_v2.0_scaffold183G39845' => 'sas', 'SGA_v2.0_scaffold1G00174' => 'sas', 'SGA_v2.0_scaffold22G09714' => 'sas', 'SGA_v2.0_scaffold333G48992' => 'sas', 'SGA_v2.0_scaffold46G17491' => 'sas', 'SGA_v2.0_scaffold49G18294' => 'sas', 'SGA_v2.0_scaffold63G21658' => 'sas', 'SHI01741' => 'shi', 'SHI05771' => 'shi', 'SHI18077' => 'shi', 'SHI20525' => 'shi', 'SHI20527' => 'shi', 'SHI20528' => 'shi', 'SMO172G0185' => 'smo', 'SMO198G0020' => 'smo', 'SMO351G0006' => 'smo', 'SMO356G0118' => 'smo', 'SMO358G0296' => 'smo', 'SMO367G0079' => 'smo', 'SMO367G1277' => 'smo', 'Solyc01g014220.3' => 'sly', 'Solyc01g111770.2' => 'sly', 'Solyc02g078180.3' => 'sly', 'Solyc03g006430.3' => 'sly', 'Solyc03g006456.1' => 'sly', 'Solyc03g079860.2' => 'sly', 'Solyc04g079770.3' => 'sly', 'Solyc05g007430.4' => 'sly', 'Solyc07g063150.3' => 'sly', 'Solyc08g016620.3' => 'sly', 'Solyc09g057590.3' => 'sly', 'Solyc09g057600.1' => 'sly', 'Solyc10g009050.3' => 'sly', 'Solyc11g017420.2' => 'sly', 'Sopen01g053810' => 'spe', 'Sopen02g023040' => 'spe', 'Sopen03g002440' => 'spe', 'Sopen04g033350' => 'spe', 'Sopen05g003310' => 'spe', 'Sopen07g004050' => 'spe', 'Sopen07g031340' => 'spe', 'Sopen08g006990' => 'spe', 'Sopen10g004830' => 'spe', 'Sopen11g009370' => 'spe', 'Sp1g24450' => 'spa', 'Sp1g29670' => 'spa', 'Sp1g39600' => 'spa', 'Sp2g11080' => 'spa', 'Sp2g13970' => 'spa', 'Sp4g16130' => 'spa', 'Sp6g13080' => 'spa', 'Sp7g37270' => 'spa', 'TAR371G0065' => 'tar', 'TAR376G0340' => 'tar', 'TAR376G0435' => 'tar', 'TAR381G0002' => 'tar', 'TAR381G1236' => 'tar', 'TAR624G0055' => 'tar', 'TAR624G0324' => 'tar', 'TAR624G0696' => 'tar', 'TAR624G0906' => 'tar', 'TAR625G0107' => 'tar', 'TAR626G0015' => 'tar', 'TAR626G1356' => 'tar', 'TAR627G0888' => 'tar', 'TAR628G0399' => 'tar', 'TAR628G1327' => 'tar', 'TAR629G2831' => 'tar', 'TAR629G2874' => 'tar', 'TAR633G1432' => 'tar', 'TAR633G2771' => 'tar', 'THA.LOC104803394' => 'tha', 'THA.LOC104805153' => 'tha', 'THA.LOC104806784' => 'tha', 'THA.LOC104810473' => 'tha', 'THA.LOC104813100' => 'tha', 'THA.LOC104814215' => 'tha', 'THA.LOC104815554' => 'tha', 'THA.LOC104820544' => 'tha', 'THA.LOC104824754' => 'tha', 'THA.LOC104827717' => 'tha', 'Thecc.02G031400' => 'tca', 'Thecc.02G055900' => 'tca', 'Thecc.02G350800' => 'tca', 'Thecc.06G150900' => 'tca', 'Thecc.06G186600' => 'tca', 'Thecc.07G089600' => 'tca', 'Thecc.08G020400' => 'tca', 'Thecc.08G182100' => 'tca', 'Thhalv10000873m.g' => 'esa', 'Thhalv10004185m.g' => 'esa', 'Thhalv10006981m.g' => 'esa', 'Thhalv10007204m.g' => 'esa', 'Thhalv10011374m.g' => 'esa', 'Thhalv10013482m.g' => 'esa', 'Thhalv10017801m.g' => 'esa', 'Thhalv10024983m.g' => 'esa', 'TPR.G12072' => 'tpr', 'TPR.G15769' => 'tpr', 'TPR.G16504' => 'tpr', 'TPR.G16506' => 'tpr', 'TPR.G24345' => 'tpr', 'TPR.G26666' => 'tpr', 'TPR.G27320' => 'tpr', 'TPR.G31819' => 'tpr', 'TPR.G38879' => 'tpr', 'TPR.G39015' => 'tpr', 'TPR.G8819' => 'tpr', 'TWI09G0924' => 'twi', 'TWI12G0811' => 'twi', 'TWI12G1294' => 'twi', 'TWI31G0150' => 'twi', 'TWI36G1262' => 'twi', 'TWI38G1287' => 'twi', 'TWI38G1633' => 'twi', 'TWI38G1982' => 'twi', 'TWI39G0116' => 'twi', 'TWI60G1011' => 'twi', 'TWI63G0171' => 'twi', 'TWI73G0839' => 'twi', 'TWI79G1511' => 'twi', 'unitig_0.g915' => 'ugi', 'unitig_0.g916' => 'ugi', 'unitig_21.g20219' => 'ugi', 'unitig_21.g20416' => 'ugi', 'unitig_578.g16132' => 'ugi', 'unitig_578.g16718' => 'ugi', 'unitig_62.g23481' => 'ugi', 'unitig_744.g24535' => 'ugi', 'unitig_749.g13525' => 'ugi', 'vmacro01248' => 'vma', 'vmacro02290' => 'vma', 'vmacro10946' => 'vma', 'vmacro11865' => 'vma', 'vmacro12493' => 'vma', 'vmacro17322' => 'vma', 'vmacro21599' => 'vma', 'vmacro23041' => 'vma', 'VMungo0251G0004' => 'vmu', 'VMungo0251G2639' => 'vmu', 'VMungo0251G2967' => 'vmu', 'VMungo0540G0864' => 'vmu', 'VMungo0540G1569' => 'vmu', 'VMungo0647G0317' => 'vmu', 'VMungo0720G1373' => 'vmu', 'VMungo0720G1508' => 'vmu', 'VMungo1080G0485' => 'vmu', 'VMungo1215G3177' => 'vmu', 'Zm00001eb112600' => 'zma', 'Zm00001eb120220' => 'zma', 'Zm00001eb153240' => 'zma', 'Zm00001eb168880' => 'zma', 'Zm00001eb213920' => 'zma', 'Zm00001eb228280' => 'zma', 'Zm00001eb254580' => 'zma', 'Zm00001eb272180' => 'zma', 'Zm00001eb293190' => 'zma', 'Zm00001eb322930' => 'zma', 'Zm00001eb353360' => 'zma', 'Zm00001eb353390' => 'zma', 'Zm00001eb353430' => 'zma', 'Zm00001eb353440' => 'zma', 'Zm00001eb353780' => 'zma' ) $gf_id = 'HOM05D000499' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000499' ) $data_identifier = 'HOM05D000499' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 29, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 12, 'amhyb' => (int) 8, 'aly' => (int) 12, 'aox' => (int) 9, 'arhy' => (int) 26, 'ath' => (int) 8, 'atr' => (int) 7, 'acertr' => (int) 10, 'cqu' => (int) 15, 'bca' => (int) 29, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 11, 'cansat' => (int) 8, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 9, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 8, 'cpa' => (int) 10, 'csa' => (int) 7, 'camsi' => (int) 20, 'dca' => (int) 8, 'din' => (int) 12, 'dzi' => (int) 14, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 6, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 38, 'gra' => (int) 16, 'vvi' => (int) 8, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 5, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 11, 'lja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 11, 'mpo' => (int) 3, 'mbi' => (int) 14, 'mdo' => (int) 14, 'mtr' => (int) 8, 'cme' => (int) 9, 'egut' => (int) 9, 'ama' => (int) 11, 'nta' => (int) 17, 'nnu' => (int) 11, 'oeu' => (int) 18, 'osa' => (int) 8, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 6, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 9, 'rsi' => (int) 9, 'sbr' => (int) 10, 'sbo' => (int) 8, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 10, 'sas' => (int) 10, 'shi' => (int) 6, 'smo' => (int) 7, 'sly' => (int) 14, 'spe' => (int) 10, 'spa' => (int) 8, 'tar' => (int) 19, 'tha' => (int) 10, 'tca' => (int) 8, 'esa' => (int) 8, 'tpr' => (int) 11, 'twi' => (int) 13, 'ugi' => (int) 9, 'vma' => (int) 8, 'vmu' => (int) 10, 'zma' => (int) 15 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb353780' $species_info = array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ) $local_species = 'lja' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000499', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1066', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p29780' => 'bna', 'A02p33180' => 'bna', 'A03p16470' => 'bna', 'A03p66010' => 'bna', 'A04p25970' => 'bna', 'A06p01270' => 'bna', 'A06p46080' => 'bna', 'A07p11400' => 'bna', 'A08p01840' => 'bna', 'A08p08230' => 'bna', 'A08p25740' => 'bna', 'A09p32070' => 'bna', 'A09p37830' => 'bna', 'A09p42840' => 'bna', 'A09p42850' => 'bna', 'Aa31LG10G2060' => 'aar', 'Aa31LG2G7410' => 'aar', 'Aa31LG6G10200' => 'aar', 'Aa31LG6G16680' => 'aar', 'Aa31LG6G8470' => 'aar', 'Aa31LG9G12730' => 'aar', 'Aa31LG9G13680' => 'aar', 'Aa31LG9G14920' => 'aar', 'Aa31LG9G6650' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4977' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5467' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3254' => 'aag', 'Actinidia02578' => 'ach', 'Actinidia07693' => 'ach', 'Actinidia08413' => 'ach', 'Actinidia08414' => 'ach', 'Actinidia15289' => 'ach', 'Actinidia19871' => 'ach', 'Actinidia21475' => 'ach', 'Actinidia22576' => 'ach', 'Actinidia28327' => 'ach', 'Actinidia32491' => 'ach', 'Actinidia39463' => 'ach', 'Actinidia39571' => 'ach', 'Ah.01g013750' => 'amhyb', 'Ah.01g023210' => 'amhyb', 'Ah.04g164850' => 'amhyb', 'Ah.05g178060' => 'amhyb', 'Ah.07g204270' => 'amhyb', 'Ah.07g208480' => 'amhyb', 'Ah.09g237410' => 'amhyb', 'Ah.14g089460' => 'amhyb', 'AL1G41790' => 'aly', 'AL1G49050' => 'aly', 'AL1G53810' => 'aly', 'AL1G61400' => 'aly', 'AL4G18580' => 'aly', 'AL5G12510' => 'aly', 'AL5G12540' => 'aly', 'AL6G43230' => 'aly', 'AL7G10370' => 'aly', 'AL7G19250' => 'aly', 'AL8G12240' => 'aly', 'AL8G18540' => 'aly', 'Aqoxy1G02409' => 'aox', 'Aqoxy2G03993' => 'aox', 'Aqoxy3G03357' => 'aox', 'Aqoxy4G00785' => 'aox', 'Aqoxy5G02598' => 'aox', 'Aqoxy6G00132' => 'aox', 'Aqoxy7G01776' => 'aox', 'Aqoxy7G02316' => 'aox', 'Aqoxy7G03973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.12AFKW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B8730' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27IQR1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3F75VG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3RE0GA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41TCQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.527VTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FIR39' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5W8UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DA38EV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ63HS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H1I32C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HC27T5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4M8AP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7N3CZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9UVDZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LS1NQA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT1D4B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SKC4TM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCFV76' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF9Q1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQWD9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1ZM88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WE07RT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YCK7VH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJE6Q6' => 'arhy', 'AT1G28240' => 'ath', 'AT1G34550' => 'ath', 'AT1G53040' => 'ath', 'AT2G02910' => 'ath', 'AT4G09630' => 'ath', 'AT4G38500' => 'ath', 'AT5G42660' => 'ath', 'AT5G46220' => 'ath', 'ATR0152G026' => 'atr', 'ATR0564G343' => 'atr', 'ATR0706G151' => 'atr', 'ATR0733G207' => 'atr', 'ATR0751G234' => 'atr', 'ATR0807G048' => 'atr', 'ATR1091G084' => 'atr', 'Atru.chr10.1229' => 'acertr', 'Atru.chr10.1230' => 'acertr', 'Atru.chr10.1874' => 'acertr', 'Atru.chr11.1808' => 'acertr', 'Atru.chr13.1795' => 'acertr', 'Atru.chr13.570' => 'acertr', 'Atru.chr2.2608' => 'acertr', 'Atru.chr2.2609' => 'acertr', 'Atru.chr5.3428' => 'acertr', 'Atru.chr8.1171' => 'acertr', 'AUR62004651' => 'cqu', 'AUR62008675' => 'cqu', 'AUR62010014' => 'cqu', 'AUR62013004' => 'cqu', 'AUR62014825' => 'cqu', 'AUR62015015' => 'cqu', 'AUR62015151' => 'cqu', 'AUR62017020' => 'cqu', 'AUR62019422' => 'cqu', 'AUR62023570' => 'cqu', 'AUR62025571' => 'cqu', 'AUR62029098' => 'cqu', 'AUR62033863' => 'cqu', 'AUR62034296' => 'cqu', 'AUR62040075' => 'cqu', 'BcaB02g07334' => 'bca', 'BcaB02g10575' => 'bca', 'BcaB03g12119' => 'bca', 'BcaB03g12120' => 'bca', 'BcaB03g13945' => 'bca', 'BcaB04g17123' => 'bca', 'BcaB04g17867' => 'bca', 'BcaB04g19839' => 'bca', 'BcaB07g30317' => 'bca', 'BcaB07g32432' => 'bca', 'BcaB07g33362' => 'bca', 'BcaB08g36611' => 'bca', 'BcaC01g00028' => 'bca', 'BcaC01g01356' => 'bca', 'BcaC01g02034' => 'bca', 'BcaC01g06051' => 'bca', 'BcaC03g16839' => 'bca', 'BcaC03g17176' => 'bca', 'BcaC05g26829' => 'bca', 'BcaC06g31490' => 'bca', 'BcaC06g35344' => 'bca', 'BcaC06g36570' => 'bca', 'BcaC07g37537' => 'bca', 'BcaC08g43491' => 'bca', 'BcaC08g43773' => 'bca', 'BcaNung00234' => 'bca', 'BcaNung01982' => 'bca', 'BcaNung03707' => 'bca', 'BcaNung06454' => 'bca', 'BolC2t10762H' => 'bol', 'BolC2t11191H' => 'bol', 'BolC3t14322H' => 'bol', 'BolC3t19747H' => 'bol', 'BolC3t21425H' => 'bol', 'BolC4t27800H' => 'bol', 'BolC5t31423H' => 'bol', 'BolC6t35951H' => 'bol', 'BolC6t36282H' => 'bol', 'BolC7t40678H' => 'bol', 'BolC7t40679H' => 'bol', 'BolC7t42222H' => 'bol', 'BolC7t43492H' => 'bol', 'BolC7t46785H' => 'bol', 'BolC8t47853H' => 'bol', 'BolC9t56805H' => 'bol', 'BraA02t08000Z' => 'bra', 'BraA02t08341Z' => 'bra', 'BraA03t10936Z' => 'bra', 'BraA03t15657Z' => 'bra', 'BraA04t18100Z' => 'bra', 'BraA05t20523Z' => 'bra', 'BraA06t23353Z' => 'bra', 'BraA06t27473Z' => 'bra', 'BraA06t27769Z' => 'bra', 'BraA07t28928Z' => 'bra', 'BraA08t32236Z' => 'bra', 'BraA08t32841Z' => 'bra', 'BraA08t34524Z' => 'bra', 'BraA09t38742Z' => 'bra', 'BraA09t39295Z' => 'bra', 'C02p47180' => 'bna', 'C02p50990' => 'bna', 'C03p19360' => 'bna', 'C03p74950' => 'bna', 'C03p91000' => 'bna', 'C04p63260' => 'bna', 'C05p27050' => 'bna', 'C06p08750' => 'bna', 'C06p11490' => 'bna', 'C07p02820' => 'bna', 'C07p17180' => 'bna', 'C07p29440' => 'bna', 'C07p63730' => 'bna', 'C09p39260' => 'bna', 'CAN.G1164.34' => 'can', 'CAN.G1164.39' => 'can', 'CAN.G1530.3' => 'can', 'CAN.G162.61' => 'can', 'CAN.G176.6' => 'can', 'CAN.G289.49' => 'can', 'CAN.G370.21' => 'can', 'CAN.G370.22' => 'can', 'CAN.G371.117' => 'can', 'CAN.G58.37' => 'can', 'CAN.G588.98' => 'can', 'CANSAT21G2266' => 'cansat', 'CANSAT25G2799' => 'cansat', 'CANSAT35G0862' => 'cansat', 'CANSAT35G1704' => 'cansat', 'CANSAT35G1760' => 'cansat', 'CANSAT56G3971' => 'cansat', 'CANSAT56G4116' => 'cansat', 'CANSAT80G1259' => 'cansat', 'CARHR027730' => 'chi', 'CARHR033880' => 'chi', 'CARHR043270' => 'chi', 'CARHR145330' => 'chi', 'CARHR145340' => 'chi', 'CARHR175570' => 'chi', 'CARHR181570' => 'chi', 'CARHR258470' => 'chi', 'CARHR260490' => 'chi', 'CARHR294220' => 'chi', 'Carub.0001s2668' => 'cru', 'Carub.0001s3257' => 'cru', 'Carub.0001s4220' => 'cru', 'Carub.0005s0179' => 'cru', 'Carub.0006s2807' => 'cru', 'Carub.0007s0039' => 'cru', 'Carub.0008s0169' => 'cru', 'Carub.0008s0636' => 'cru', 'Ca_00338_v3' => 'car', 'Ca_00542_v3' => 'car', 'Ca_01844_v3' => 'car', 'Ca_10611_v3' => 'car', 'Ca_13326_v3' => 'car', 'Ca_17944_v3' => 'car', 'Ca_18546_v3' => 'car', 'Ca_24219_v3' => 'car', 'Ca_29972_v3' => 'car', 'CBR_g3681' => 'cbr', 'CBR_g40021' => 'cbr', 'Cc01_g08140' => 'ccan', 'Cc02_g13410' => 'ccan', 'Cc02_g37480' => 'ccan', 'Cc05_g12030' => 'ccan', 'Cc09_g03370' => 'ccan', 'Cc09_g10300' => 'ccan', 'Cc10_g03530' => 'ccan', 'Cc10_g11380' => 'ccan', 'CDE01G0176' => 'cde', 'CDE02G0675' => 'cde', 'CDE02G0942' => 'cde', 'CDE02G1153' => 'cde', 'CDE02G4177' => 'cde', 'CDE04G2117' => 'cde', 'CDE04G2736' => 'cde', 'CDE08G1161' => 'cde', 'CDE09G1238' => 'cde', 'Cfa000467' => 'cfa', 'Cfa000947' => 'cfa', 'Cfa004969' => 'cfa', 'Cfa005284' => 'cfa', 'Cfa008993' => 'cfa', 'Cfa018187' => 'cfa', 'Cfa018454' => 'cfa', 'Cfa020585' => 'cfa', 'Ciclev10000424m.g' => 'ccl', 'Ciclev10003605m.g' => 'ccl', 'Ciclev10007828m.g' => 'ccl', 'Ciclev10014620m.g' => 'ccl', 'Ciclev10015169m.g' => 'ccl', 'Ciclev10018291m.g' => 'ccl', 'Ciclev10028256m.g' => 'ccl', 'Ciclev10033822m.g' => 'ccl', 'CiPaw.05G060300' => 'cil', 'CiPaw.05G085000' => 'cil', 'CiPaw.06G083700' => 'cil', 'CiPaw.06G120300' => 'cil', 'CiPaw.09G060500' => 'cil', 'CiPaw.09G123800' => 'cil', 'CiPaw.11G169700' => 'cil', 'CiPaw.12G118300' => 'cil', 'CiPaw.15G071000' => 'cil', 'CiPaw.15G081900' => 'cil', 'ClCG01G024610' => 'cla', 'ClCG03G006070' => 'cla', 'ClCG05G019250' => 'cla', 'ClCG09G009500' => 'cla', 'ClCG11G008200' => 'cla', 'ClCG11G018080' => 'cla', 'COL.COLO4_17373' => 'col', 'COL.COLO4_22994' => 'col', 'COL.COLO4_26389' => 'col', 'COL.COLO4_27170' => 'col', 'COL.COLO4_31074' => 'col', 'COL.COLO4_31465' => 'col', 'COL.COLO4_36438' => 'col', 'COL.COLO4_36439' => 'col', 'Cpa.g.c38781' => 'cpa', 'Cpa.g.sc128.12' => 'cpa', 'Cpa.g.sc166.7' => 'cpa', 'Cpa.g.sc166.8' => 'cpa', 'Cpa.g.sc20.111' => 'cpa', 'Cpa.g.sc27.31' => 'cpa', 'Cpa.g.sc64.36' => 'cpa', 'Cpa.g.sc64.37' => 'cpa', 'Cpa.g.sc66.49' => 'cpa', 'Cpa.g.sc80.64' => 'cpa', 'CsaV3_1G012320' => 'csa', 'CsaV3_2G008480' => 'csa', 'CsaV3_2G033450' => 'csa', 'CsaV3_3G044830' => 'csa', 'CsaV3_4G033710' => 'csa', 'CsaV3_6G051730' => 'csa', 'CsaV3_7G025350' => 'csa', 'CSS0001067' => 'camsi', 'CSS0005996' => 'camsi', 'CSS0006590' => 'camsi', 'CSS0009673' => 'camsi', 'CSS0010201' => 'camsi', 'CSS0010549' => 'camsi', 'CSS0011364' => 'camsi', 'CSS0014473' => 'camsi', 'CSS0014961' => 'camsi', 'CSS0020191' => 'camsi', 'CSS0021165' => 'camsi', 'CSS0022306' => 'camsi', 'CSS0030591' => 'camsi', 'CSS0030696' => 'camsi', 'CSS0032653' => 'camsi', 'CSS0037487' => 'camsi', 'CSS0041102' => 'camsi', 'CSS0041261' => 'camsi', 'CSS0046246' => 'camsi', 'CSS0049256' => 'camsi', 'DCAR_004075' => 'dca', 'DCAR_011538' => 'dca', 'DCAR_019553' => 'dca', 'DCAR_020952' => 'dca', 'DCAR_021739' => 'dca', 'DCAR_027407' => 'dca', 'DCAR_027913' => 'dca', 'DCAR_028066' => 'dca', 'Dinv05899' => 'din', 'Dinv07563' => 'din', 'Dinv08010' => 'din', 'Dinv14125' => 'din', 'Dinv20172' => 'din', 'Dinv30743' => 'din', 'Dinv31229' => 'din', 'Dinv34162' => 'din', 'Dinv36028' => 'din', 'Dinv39368' => 'din', 'Dinv40565' => 'din', 'Dinv41706' => 'din', 'Duzib052G0089' => 'dzi', 'Duzib116G0641' => 'dzi', 'Duzib132G0069' => 'dzi', 'Duzib132G1219' => 'dzi', 'Duzib147G0278' => 'dzi', 'Duzib160G0480' => 'dzi', 'Duzib170G0661' => 'dzi', 'Duzib177G0591' => 'dzi', 'Duzib187G1353' => 'dzi', 'Duzib192G0858' => 'dzi', 'Duzib192G0883' => 'dzi', 'Duzib213G0506' => 'dzi', 'Duzib235G0289' => 'dzi', 'Duzib251G0422' => 'dzi', 'ECA232G3898' => 'eca', 'ECA233G5950' => 'eca', 'ECA234G1699' => 'eca', 'ECA234G2421' => 'eca', 'ECA236G0426' => 'eca', 'ECA236G4331' => 'eca', 'ECA248G2573' => 'eca', 'EL10Ac1g00077' => 'bvu', 'EL10Ac1g01746' => 'bvu', 'EL10Ac2g03464' => 'bvu', 'EL10Ac4g08176' => 'bvu', 'EL10Ac7g17521' => 'bvu', 'EL10Ac8g20386' => 'bvu', 'EL10Ac9g21343' => 'bvu', 'EL10Ac9g22688' => 'bvu', 'Eucgr.B03434' => 'egr', 'Eucgr.D00618' => 'egr', 'Eucgr.E02395' => 'egr', 'Eucgr.F01129' => 'egr', 'Eucgr.F02622' => 'egr', 'Eucgr.F04207' => 'egr', 'FAN01G0570' => 'fan', 'FAN03G3351' => 'fan', 'FAN06G3702' => 'fan', 'FAN07G2149' => 'fan', 'FAN10G3758' => 'fan', 'FAN11G1170' => 'fan', 'FAN11G2050' => 'fan', 'FAN11G2724' => 'fan', 'FAN12G1700' => 'fan', 'FAN12G2028' => 'fan', 'FAN15G1160' => 'fan', 'FAN15G3063' => 'fan', 'FAN16G2540' => 'fan', 'FAN16G3077' => 'fan', 'FAN16G3624' => 'fan', 'FAN17G0221' => 'fan', 'FAN20G2492' => 'fan', 'FAN20G2905' => 'fan', 'FAN21G0548' => 'fan', 'FAN21G1300' => 'fan', 'FAN22G0077' => 'fan', 'FAN22G1315' => 'fan', 'FAN24G1280' => 'fan', 'FAN24G1445' => 'fan', 'FAN24G3527' => 'fan', 'FAN25G0464' => 'fan', 'FAN25G2885' => 'fan', 'FAN25G3270' => 'fan', 'FAN27G1101' => 'fan', 'FAN27G2846' => 'fan', 'FAN27G3524' => 'fan', 'FvH4_2g11770' => 'fve', 'FvH4_2g15630' => 'fve', 'FvH4_3g05570' => 'fve', 'FvH4_3g09110' => 'fve', 'FvH4_3g19940' => 'fve', 'FvH4_4g04821' => 'fve', 'FvH4_4g31480' => 'fve', 'FvH4_7g01740' => 'fve', 'Glyma.05G130400' => 'gma', 'Glyma.05G156400' => 'gma', 'Glyma.07G197000' => 'gma', 'Glyma.08G085151' => 'gma', 'Glyma.08G114500' => 'gma', 'Glyma.08G300400' => 'gma', 'Glyma.10G215800' => 'gma', 'Glyma.12G224400' => 'gma', 'Glyma.13G179300' => 'gma', 'Glyma.13G218151' => 'gma', 'Glyma.13G238800' => 'gma', 'Glyma.13G276900' => 'gma', 'Glyma.14G078200' => 'gma', 'Glyma.15G074500' => 'gma', 'Glyma.15G094100' => 'gma', 'Glyma.17G247200' => 'gma', 'Glyma.18G120100' => 'gma', 'Glyma.20G176000' => 'gma', 'Gohir.A01G063600' => 'ghi', 'Gohir.A01G170301' => 'ghi', 'Gohir.A02G060500' => 'ghi', 'Gohir.A05G133850' => 'ghi', 'Gohir.A05G161400' => 'ghi', 'Gohir.A06G012900' => 'ghi', 'Gohir.A06G035901' => 'ghi', 'Gohir.A06G127100' => 'ghi', 'Gohir.A06G210500' => 'ghi', 'Gohir.A08G008650' => 'ghi', 'Gohir.A09G072700' => 'ghi', 'Gohir.A09G088301' => 'ghi', 'Gohir.A10G040600' => 'ghi', 'Gohir.A12G036300' => 'ghi', 'Gohir.A12G143350' => 'ghi', 'Gohir.A12G165500' => 'ghi', 'Gohir.A13G145700' => 'ghi', 'Gohir.D01G050000' => 'ghi', 'Gohir.D01G051366' => 'ghi', 'Gohir.D01G161350' => 'ghi', 'Gohir.D02G065900' => 'ghi', 'Gohir.D05G164200' => 'ghi', 'Gohir.D05G355500' => 'ghi', 'Gohir.D06G010400' => 'ghi', 'Gohir.D06G111250' => 'ghi', 'Gohir.D06G132000' => 'ghi', 'Gohir.D06G210500' => 'ghi', 'Gohir.D07G165675' => 'ghi', 'Gohir.D08G062240' => 'ghi', 'Gohir.D08G086101' => 'ghi', 'Gohir.D08G138060' => 'ghi', 'Gohir.D09G072300' => 'ghi', 'Gohir.D10G041400' => 'ghi', 'Gohir.D11G191020' => 'ghi', 'Gohir.D11G212066' => 'ghi', 'Gohir.D12G036300' => 'ghi', 'Gohir.D12G168600' => 'ghi', 'Gohir.D13G150600' => 'ghi', 'Gorai.001G057300' => 'gra', 'Gorai.002G069900' => 'gra', 'Gorai.002G200000' => 'gra', 'Gorai.003G067600' => 'gra', 'Gorai.005G074800' => 'gra', 'Gorai.006G087300' => 'gra', 'Gorai.008G037500' => 'gra', 'Gorai.008G181400' => 'gra', 'Gorai.009G169400' => 'gra', 'Gorai.009G387900' => 'gra', 'Gorai.010G013300' => 'gra', 'Gorai.010G153800' => 'gra', 'Gorai.010G255800' => 'gra', 'Gorai.011G043700' => 'gra', 'Gorai.011G198900' => 'gra', 'Gorai.013G168400' => 'gra', 'GSVIVG01005212001' => 'vvi', 'GSVIVG01006163001' => 'vvi', 'GSVIVG01009625001' => 'vvi', 'GSVIVG01014338001' => 'vvi', 'GSVIVG01020005001' => 'vvi', 'GSVIVG01021450001' => 'vvi', 'GSVIVG01023975001' => 'vvi', 'GSVIVG01034490001' => 'vvi', 'HanXRQChr04g0112071' => 'han', 'HanXRQChr05g0131151' => 'han', 'HanXRQChr09g0262371' => 'han', 'HanXRQChr09g0268401' => 'han', 'HanXRQChr10g0279241' => 'han', 'HanXRQChr10g0297961' => 'han', 'HanXRQChr11g0326231' => 'han', 'HanXRQChr11g0328471' => 'han', 'HanXRQChr16g0507941' => 'han', 'HanXRQChr17g0560211' => 'han', 'Haze_02108' => 'cav', 'Haze_02428' => 'cav', 'Haze_05593' => 'cav', 'Haze_06448' => 'cav', 'Haze_09427' => 'cav', 'Haze_12022' => 'cav', 'Haze_17612' => 'cav', 'Haze_17928' => 'cav', 'Hma1.2p1_0032F.1_g019250' => 'hma', 'Hma1.2p1_0163F.1_g072690' => 'hma', 'Hma1.2p1_0265F.1_g106710' => 'hma', 'Hma1.2p1_0286F.1_g113970' => 'hma', 'Hma1.2p1_0363F.1_g136640' => 'hma', 'Hma1.2p1_0584F.1_g183470' => 'hma', 'Hma1.2p1_0885F.1_g232570' => 'hma', 'HPP92_006022' => 'vpl', 'HPP92_007320' => 'vpl', 'HPP92_011521' => 'vpl', 'HPP92_019387' => 'vpl', 'HPP92_024038' => 'vpl', 'Hund05891' => 'sun', 'Hund06450' => 'sun', 'Hund12053' => 'sun', 'Hund16800' => 'sun', 'Hund21222' => 'sun', 'Hund22896' => 'sun', 'Hund23746' => 'sun', 'Hund27083' => 'sun', 'Lalb_Chr02g0141831' => 'lal', 'Lalb_Chr02g0141841' => 'lal', 'Lalb_Chr05g0220411' => 'lal', 'Lalb_Chr06g0162081' => 'lal', 'Lalb_Chr09g0327651' => 'lal', 'Lalb_Chr13g0295051' => 'lal', 'Lalb_Chr15g0086801' => 'lal', 'Lalb_Chr16g0383781' => 'lal', 'Lalb_Chr16g0383791' => 'lal', 'Lalb_Chr18g0055441' => 'lal', 'Lalb_Chr18g0059611' => 'lal', 'Lalb_Chr20g0109661' => 'lal', 'Lalb_Chr20g0109831' => 'lal', 'Lalb_Chr20g0121871' => 'lal', 'Lalb_Chr22g0355361' => 'lal', 'Lalb_Chr25g0286371' => 'lal', 'Lj1A1187G43' => 'lonja', 'Lj1A1205T50' => 'lonja', 'Lj1A800G33' => 'lonja', 'Lj1C1187T7' => 'lonja', 'Lj1C843T11' => 'lonja', 'Lj1g0010940' => 'lja', 'Lj2A288T69' => 'lonja', 'Lj3g0024276' => 'lja', 'Lj4A47T76' => 'lonja', 'Lj4g0005805' => 'lja', 'Lj4g0006097' => 'lja', 'Lj4g0008528' => 'lja', 'Lj4g0024907' => 'lja', 'Lj5g0012472' => 'lja', 'Lj5g0018648' => 'lja', 'Lj6C789G1' => 'lonja', 'Lj6g0004000' => 'lja', 'Lj7A292G67' => 'lonja', 'Lj7A292T64' => 'lonja', 'Lj9A400T58' => 'lonja', 'Lsat_1_v5_gn_1_126181' => 'lsa', 'Lsat_1_v5_gn_4_123041' => 'lsa', 'Lsat_1_v5_gn_4_133620' => 'lsa', 'Lsat_1_v5_gn_4_53221' => 'lsa', 'Lsat_1_v5_gn_4_71961' => 'lsa', 'Lsat_1_v5_gn_7_105241' => 'lsa', 'Lsat_1_v5_gn_7_21361' => 'lsa', 'Lsat_1_v5_gn_7_28860' => 'lsa', 'Lsat_1_v5_gn_7_31260' => 'lsa', 'Lsat_1_v5_gn_8_52801' => 'lsa', 'Manes.02G191400' => 'mes', 'Manes.03G110100' => 'mes', 'Manes.04G071100' => 'mes', 'Manes.05G100500' => 'mes', 'Manes.05G164700' => 'mes', 'Manes.15G087000' => 'mes', 'Manes.15G121500' => 'mes', 'Manes.16G028300' => 'mes', 'Manes.17G046100' => 'mes', 'Manes.17G069800' => 'mes', 'Manes.18G100500' => 'mes', 'Mapoly0002s0109' => 'mpo', 'Mapoly0024s0007' => 'mpo', 'Mapoly0089s0032' => 'mpo', 'MBI04_g42241_MAGBIO' => 'mbi', 'MBI05_g11988_MAGBIO' => 'mbi', 'MBI05_g35452_MAGBIO' => 'mbi', 'MBI07_g30179_MAGBIO' => 'mbi', 'MBI07_g35859_MAGBIO' => 'mbi', 'MBI07_g35860_MAGBIO' => 'mbi', 'MBI07_g37166_MAGBIO' => 'mbi', 'MBI08_g18172_MAGBIO' => 'mbi', 'MBI09_g08441_MAGBIO' => 'mbi', 'MBI13_g01676_MAGBIO' => 'mbi', 'MBI14_g42955_MAGBIO' => 'mbi', 'MBI16_g13161_MAGBIO' => 'mbi', 'MBI17_g27204_MAGBIO' => 'mbi', 'MBI19_g21595_MAGBIO' => 'mbi', 'MD00G1148400' => 'mdo', 'MD02G1301200' => 'mdo', 'MD03G1227800' => 'mdo', 'MD05G1041100' => 'mdo', 'MD05G1124800' => 'mdo', 'MD05G1284000' => 'mdo', 'MD05G1338800' => 'mdo', 'MD05G1338900' => 'mdo', 'MD07G1022800' => 'mdo', 'MD10G1047500' => 'mdo', 'MD10G1127500' => 'mdo', 'MD10G1262300' => 'mdo', 'MD10G1293800' => 'mdo', 'MD16G1074300' => 'mdo', 'Medtr1g021670' => 'mtr', 'Medtr1g096320' => 'mtr', 'Medtr2g013690' => 'mtr', 'Medtr2g019450' => 'mtr', 'Medtr2g085170' => 'mtr', 'Medtr4g088785' => 'mtr', 'Medtr8g055930' => 'mtr', 'Medtr8g085850' => 'mtr', 'MELO3C002605.2' => 'cme', 'MELO3C003891.2' => 'cme', 'MELO3C004012.2' => 'cme', 'MELO3C007134.2' => 'cme', 'MELO3C008118.2' => 'cme', 'MELO3C016700.2' => 'cme', 'MELO3C024127.2' => 'cme', 'MELO3C033361.2' => 'cme', 'MELO3C033362.2' => 'cme', 'Migut.C00430' => 'egut', 'Migut.C01246' => 'egut', 'Migut.E00101' => 'egut', 'Migut.H01486' => 'egut', 'Migut.H01939' => 'egut', 'Migut.K00360' => 'egut', 'Migut.M00910' => 'egut', 'Migut.M01139' => 'egut', 'Migut.N02677' => 'egut', 'MSTRG.13252' => 'ama', 'MSTRG.14701' => 'ama', 'MSTRG.1521' => 'ama', 'MSTRG.15884' => 'ama', 'MSTRG.16242' => 'ama', 'MSTRG.22285' => 'ama', 'MSTRG.22444' => 'ama', 'MSTRG.2349' => 'ama', 'MSTRG.26308' => 'ama', 'MSTRG.28296' => 'ama', 'MSTRG.9895' => 'ama', 'Nitab4.5_0000110g0060' => 'nta', 'Nitab4.5_0000420g0130' => 'nta', 'Nitab4.5_0000422g0030' => 'nta', 'Nitab4.5_0000560g0180' => 'nta', 'Nitab4.5_0000703g0100' => 'nta', 'Nitab4.5_0000786g0200' => 'nta', 'Nitab4.5_0001336g0020' => 'nta', 'Nitab4.5_0001796g0030' => 'nta', 'Nitab4.5_0003348g0060' => 'nta', 'Nitab4.5_0003698g0040' => 'nta', 'Nitab4.5_0003942g0090' => 'nta', 'Nitab4.5_0004775g0070' => 'nta', 'Nitab4.5_0004864g0030' => 'nta', 'Nitab4.5_0005615g0020' => 'nta', 'Nitab4.5_0009288g0030' => 'nta', 'Nitab4.5_0009341g0010' => 'nta', 'Nitab4.5_0009535g0010' => 'nta', 'Nn1g03995' => 'nnu', 'Nn1g04100' => 'nnu', 'Nn1g06530' => 'nnu', 'Nn3g16404' => 'nnu', 'Nn3g17212' => 'nnu', 'Nn3g20776' => 'nnu', 'Nn3g21923' => 'nnu', 'Nn5g27737' => 'nnu', 'Nn5g29461' => 'nnu', 'Nn7g38355' => 'nnu', 'Nn8g39873' => 'nnu', 'Oeu000548.2' => 'oeu', 'Oeu004672.1' => 'oeu', 'Oeu015605.2' => 'oeu', 'Oeu016092.1' => 'oeu', 'Oeu017879.3' => 'oeu', 'Oeu024910.1' => 'oeu', 'Oeu028965.1' => 'oeu', 'Oeu031269.1' => 'oeu', 'Oeu031270.1' => 'oeu', 'Oeu032535.1' => 'oeu', 'Oeu034151.1' => 'oeu', 'Oeu034152.1' => 'oeu', 'Oeu034588.2' => 'oeu', 'Oeu050846.1' => 'oeu', 'Oeu050849.2' => 'oeu', 'Oeu051063.2' => 'oeu', 'Oeu052368.1' => 'oeu', 'Oeu052370.1' => 'oeu', 'Os01g0210400' => 'osa', 'Os01g0304300' => 'osa', 'Os01g0749100' => 'osa', 'Os02g0745800' => 'osa', 'Os03g0769050' => 'osa', 'Os05g0531500' => 'osa', 'Os06g0724300' => 'osa', 'Os11g0198100' => 'osa', 'Peaxi162Scf00069g01425' => 'pax', 'Peaxi162Scf00280g00811' => 'pax', 'Peaxi162Scf00310g00615' => 'pax', 'Peaxi162Scf00362g00542' => 'pax', 'Peaxi162Scf00461g00310' => 'pax', 'Peaxi162Scf00530g00118' => 'pax', 'Peaxi162Scf00541g00057' => 'pax', 'Peaxi162Scf00661g00017' => 'pax', 'Peaxi162Scf00926g00027' => 'pax', 'Peaxi162Scf01064g00263' => 'pax', 'Peaxi162Scf01211g00135' => 'pax', 'PGR004G2336' => 'pgr', 'PGR042G0327' => 'pgr', 'PGR042G1957' => 'pgr', 'PGR042G2003' => 'pgr', 'PGR042G3929' => 'pgr', 'PGR083G1137' => 'pgr', 'PGR083G1364' => 'pgr', 'PGSC0003DMG400003381' => 'stu', 'PGSC0003DMG400003417' => 'stu', 'PGSC0003DMG400008981' => 'stu', 'PGSC0003DMG400012417' => 'stu', 'PGSC0003DMG400012823' => 'stu', 'PGSC0003DMG400016885' => 'stu', 'PGSC0003DMG400022812' => 'stu', 'PGSC0003DMG400029726' => 'stu', 'PGSC0003DMG401009243' => 'stu', 'PGSC0003DMG401031505' => 'stu', 'PGSC0003DMG402031505' => 'stu', 'Phvul.001G017600' => 'pvu', 'Phvul.002G193500' => 'pvu', 'Phvul.002G228900' => 'pvu', 'Phvul.002G236800' => 'pvu', 'Phvul.003G049500' => 'pvu', 'Phvul.005G072000' => 'pvu', 'Phvul.006G164800' => 'pvu', 'Phvul.006G185100' => 'pvu', 'Phvul.007G090000' => 'pvu', 'Potri.001G399800' => 'ptr', 'Potri.002G149900' => 'ptr', 'Potri.004G044100' => 'ptr', 'Potri.004G177600' => 'ptr', 'Potri.009G138000' => 'ptr', 'Potri.010G094000' => 'ptr', 'Potri.011G053000' => 'ptr', 'Potri.011G119300' => 'ptr', 'Potri.013G113700' => 'ptr', 'Potri.018G107800' => 'ptr', 'Potri.019G084100' => 'ptr', 'Pp3c14_23720' => 'ppa', 'Pp3c16_6340' => 'ppa', 'Pp3c23_13420' => 'ppa', 'Pp3c24_2740' => 'ppa', 'Pp3c25_860' => 'ppa', 'Pp3c8_21750' => 'ppa', 'Prupe.1G273000' => 'ppe', 'Prupe.1G273700' => 'ppe', 'Prupe.1G274100' => 'ppe', 'Prupe.2G023300' => 'ppe', 'Prupe.4G048000' => 'ppe', 'Prupe.4G080400' => 'ppe', 'Prupe.4G181200' => 'ppe', 'Prupe.8G056900' => 'ppe', 'Prupe.8G168700' => 'ppe', 'Psat1g189080' => 'psa', 'Psat1g204760' => 'psa', 'Psat4g175560' => 'psa', 'Psat4g177720' => 'psa', 'Psat5g244240' => 'psa', 'Psat6g010720' => 'psa', 'Psat6g187200' => 'psa', 'Psat7g072040' => 'psa', 'PSO017G3501' => 'pso', 'PSO063G2148' => 'pso', 'PSO063G5608' => 'pso', 'PSO210G6392' => 'pso', 'PSO541G2319' => 'pso', 'PSO541G2836' => 'pso', 'PSO541G4012' => 'pso', 'PSO541G6253' => 'pso', 'PSO675G0580' => 'pso', 'PSO675G0856' => 'pso', 'PSO675G5635' => 'pso', 'PSO675G9157' => 'pso', 'PSO832G1660' => 'pso', 'PSO832G1969' => 'pso', 'QL02p007186' => 'qlo', 'QL02p033904' => 'qlo', 'QL03p064391' => 'qlo', 'QL05p040593' => 'qlo', 'QL05p058242' => 'qlo', 'QL08p021825' => 'qlo', 'QL11p004981' => 'qlo', 'RcHm_v2.0_Chr1g0318301' => 'rch', 'RcHm_v2.0_Chr4g0418501' => 'rch', 'RcHm_v2.0_Chr4g0439971' => 'rch', 'RcHm_v2.0_Chr5g0008541' => 'rch', 'RcHm_v2.0_Chr5g0014101' => 'rch', 'RcHm_v2.0_Chr5g0014131' => 'rch', 'RcHm_v2.0_Chr5g0033621' => 'rch', 'RcHm_v2.0_Chr6g0272041' => 'rch', 'RcHm_v2.0_Chr6g0278831' => 'rch', 'Rhsim02G0130400' => 'rsi', 'Rhsim02G0171100' => 'rsi', 'Rhsim05G0053000' => 'rsi', 'Rhsim05G0053100' => 'rsi', 'Rhsim06G0096500' => 'rsi', 'Rhsim06G0096600' => 'rsi', 'Rhsim06G0199100' => 'rsi', 'Rhsim12G0062300' => 'rsi', 'Rhsim12G0062800' => 'rsi', 'Sabra02G0118600' => 'sbr', 'Sabra04G0027300' => 'sbr', 'Sabra04G0119500' => 'sbr', 'Sabra08G0112500' => 'sbr', 'Sabra11G0036800' => 'sbr', 'Sabra11G0103800' => 'sbr', 'Sabra13G0096300' => 'sbr', 'Sabra16G0262300' => 'sbr', 'Sabra18G0091700' => 'sbr', 'Sabra19G0095400' => 'sbr', 'SalBow6G3080' => 'sbo', 'SalBow7G1157' => 'sbo', 'SalBow7G2123' => 'sbo', 'SalBow7G2285' => 'sbo', 'SalBow7G3537' => 'sbo', 'SalBow8G2947' => 'sbo', 'SalBow8G4463' => 'sbo', 'SalBow8G5466' => 'sbo', 'Sc01g0001750' => 'sci', 'Sc02g0006640' => 'sci', 'Sc02g0006670' => 'sci', 'Sc04g0008220' => 'sci', 'Sc05g0006190' => 'sci', 'Sc08g0002760' => 'sci', 'Sc17g0006170' => 'sci', 'Sc22g0002050' => 'sci', 'Sc23g0001190' => 'sci', 'Sc24g0000980' => 'sci', 'Sed0006245' => 'sed', 'Sed0007543' => 'sed', 'Sed0009411' => 'sed', 'Sed0010765' => 'sed', 'Sed0012944' => 'sed', 'Sed0014682' => 'sed', 'Sed0016174' => 'sed', 'Sed0016796' => 'sed', 'Sed0020317' => 'sed', 'Sed0021467' => 'sed', 'SEGI_01316' => 'sgi', 'SEGI_03374' => 'sgi', 'SEGI_16265' => 'sgi', 'SEGI_18569' => 'sgi', 'SEGI_20351' => 'sgi', 'SEGI_26395' => 'sgi', 'SEGI_29469' => 'sgi', 'SEGI_34771' => 'sgi', 'SEGI_36769' => 'sgi', 'SEGI_37139' => 'sgi', 'SGA_v2.0_scaffold100G29687' => 'sas', 'SGA_v2.0_scaffold118G32472' => 'sas', 'SGA_v2.0_scaffold14G07051' => 'sas', 'SGA_v2.0_scaffold183G39845' => 'sas', 'SGA_v2.0_scaffold1G00174' => 'sas', 'SGA_v2.0_scaffold22G09714' => 'sas', 'SGA_v2.0_scaffold333G48992' => 'sas', 'SGA_v2.0_scaffold46G17491' => 'sas', 'SGA_v2.0_scaffold49G18294' => 'sas', 'SGA_v2.0_scaffold63G21658' => 'sas', 'SHI01741' => 'shi', 'SHI05771' => 'shi', 'SHI18077' => 'shi', 'SHI20525' => 'shi', 'SHI20527' => 'shi', 'SHI20528' => 'shi', 'SMO172G0185' => 'smo', 'SMO198G0020' => 'smo', 'SMO351G0006' => 'smo', 'SMO356G0118' => 'smo', 'SMO358G0296' => 'smo', 'SMO367G0079' => 'smo', 'SMO367G1277' => 'smo', 'Solyc01g014220.3' => 'sly', 'Solyc01g111770.2' => 'sly', 'Solyc02g078180.3' => 'sly', 'Solyc03g006430.3' => 'sly', 'Solyc03g006456.1' => 'sly', 'Solyc03g079860.2' => 'sly', 'Solyc04g079770.3' => 'sly', 'Solyc05g007430.4' => 'sly', 'Solyc07g063150.3' => 'sly', 'Solyc08g016620.3' => 'sly', 'Solyc09g057590.3' => 'sly', 'Solyc09g057600.1' => 'sly', 'Solyc10g009050.3' => 'sly', 'Solyc11g017420.2' => 'sly', 'Sopen01g053810' => 'spe', 'Sopen02g023040' => 'spe', 'Sopen03g002440' => 'spe', 'Sopen04g033350' => 'spe', 'Sopen05g003310' => 'spe', 'Sopen07g004050' => 'spe', 'Sopen07g031340' => 'spe', 'Sopen08g006990' => 'spe', 'Sopen10g004830' => 'spe', 'Sopen11g009370' => 'spe', 'Sp1g24450' => 'spa', 'Sp1g29670' => 'spa', 'Sp1g39600' => 'spa', 'Sp2g11080' => 'spa', 'Sp2g13970' => 'spa', 'Sp4g16130' => 'spa', 'Sp6g13080' => 'spa', 'Sp7g37270' => 'spa', 'TAR371G0065' => 'tar', 'TAR376G0340' => 'tar', 'TAR376G0435' => 'tar', 'TAR381G0002' => 'tar', 'TAR381G1236' => 'tar', 'TAR624G0055' => 'tar', 'TAR624G0324' => 'tar', 'TAR624G0696' => 'tar', 'TAR624G0906' => 'tar', 'TAR625G0107' => 'tar', 'TAR626G0015' => 'tar', 'TAR626G1356' => 'tar', 'TAR627G0888' => 'tar', 'TAR628G0399' => 'tar', 'TAR628G1327' => 'tar', 'TAR629G2831' => 'tar', 'TAR629G2874' => 'tar', 'TAR633G1432' => 'tar', 'TAR633G2771' => 'tar', 'THA.LOC104803394' => 'tha', 'THA.LOC104805153' => 'tha', 'THA.LOC104806784' => 'tha', 'THA.LOC104810473' => 'tha', 'THA.LOC104813100' => 'tha', 'THA.LOC104814215' => 'tha', 'THA.LOC104815554' => 'tha', 'THA.LOC104820544' => 'tha', 'THA.LOC104824754' => 'tha', 'THA.LOC104827717' => 'tha', 'Thecc.02G031400' => 'tca', 'Thecc.02G055900' => 'tca', 'Thecc.02G350800' => 'tca', 'Thecc.06G150900' => 'tca', 'Thecc.06G186600' => 'tca', 'Thecc.07G089600' => 'tca', 'Thecc.08G020400' => 'tca', 'Thecc.08G182100' => 'tca', 'Thhalv10000873m.g' => 'esa', 'Thhalv10004185m.g' => 'esa', 'Thhalv10006981m.g' => 'esa', 'Thhalv10007204m.g' => 'esa', 'Thhalv10011374m.g' => 'esa', 'Thhalv10013482m.g' => 'esa', 'Thhalv10017801m.g' => 'esa', 'Thhalv10024983m.g' => 'esa', 'TPR.G12072' => 'tpr', 'TPR.G15769' => 'tpr', 'TPR.G16504' => 'tpr', 'TPR.G16506' => 'tpr', 'TPR.G24345' => 'tpr', 'TPR.G26666' => 'tpr', 'TPR.G27320' => 'tpr', 'TPR.G31819' => 'tpr', 'TPR.G38879' => 'tpr', 'TPR.G39015' => 'tpr', 'TPR.G8819' => 'tpr', 'TWI09G0924' => 'twi', 'TWI12G0811' => 'twi', 'TWI12G1294' => 'twi', 'TWI31G0150' => 'twi', 'TWI36G1262' => 'twi', 'TWI38G1287' => 'twi', 'TWI38G1633' => 'twi', 'TWI38G1982' => 'twi', 'TWI39G0116' => 'twi', 'TWI60G1011' => 'twi', 'TWI63G0171' => 'twi', 'TWI73G0839' => 'twi', 'TWI79G1511' => 'twi', 'unitig_0.g915' => 'ugi', 'unitig_0.g916' => 'ugi', 'unitig_21.g20219' => 'ugi', 'unitig_21.g20416' => 'ugi', 'unitig_578.g16132' => 'ugi', 'unitig_578.g16718' => 'ugi', 'unitig_62.g23481' => 'ugi', 'unitig_744.g24535' => 'ugi', 'unitig_749.g13525' => 'ugi', 'vmacro01248' => 'vma', 'vmacro02290' => 'vma', 'vmacro10946' => 'vma', 'vmacro11865' => 'vma', 'vmacro12493' => 'vma', 'vmacro17322' => 'vma', 'vmacro21599' => 'vma', 'vmacro23041' => 'vma', 'VMungo0251G0004' => 'vmu', 'VMungo0251G2639' => 'vmu', 'VMungo0251G2967' => 'vmu', 'VMungo0540G0864' => 'vmu', 'VMungo0540G1569' => 'vmu', 'VMungo0647G0317' => 'vmu', 'VMungo0720G1373' => 'vmu', 'VMungo0720G1508' => 'vmu', 'VMungo1080G0485' => 'vmu', 'VMungo1215G3177' => 'vmu', 'Zm00001eb112600' => 'zma', 'Zm00001eb120220' => 'zma', 'Zm00001eb153240' => 'zma', 'Zm00001eb168880' => 'zma', 'Zm00001eb213920' => 'zma', 'Zm00001eb228280' => 'zma', 'Zm00001eb254580' => 'zma', 'Zm00001eb272180' => 'zma', 'Zm00001eb293190' => 'zma', 'Zm00001eb322930' => 'zma', 'Zm00001eb353360' => 'zma', 'Zm00001eb353390' => 'zma', 'Zm00001eb353430' => 'zma', 'Zm00001eb353440' => 'zma', 'Zm00001eb353780' => 'zma' ), 'gf_id' => 'HOM05D000499', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000499' ), 'data_identifier' => 'HOM05D000499', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000499', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1066', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p29780' => 'bna', 'A02p33180' => 'bna', 'A03p16470' => 'bna', 'A03p66010' => 'bna', 'A04p25970' => 'bna', 'A06p01270' => 'bna', 'A06p46080' => 'bna', 'A07p11400' => 'bna', 'A08p01840' => 'bna', 'A08p08230' => 'bna', 'A08p25740' => 'bna', 'A09p32070' => 'bna', 'A09p37830' => 'bna', 'A09p42840' => 'bna', 'A09p42850' => 'bna', 'Aa31LG10G2060' => 'aar', 'Aa31LG2G7410' => 'aar', 'Aa31LG6G10200' => 'aar', 'Aa31LG6G16680' => 'aar', 'Aa31LG6G8470' => 'aar', 'Aa31LG9G12730' => 'aar', 'Aa31LG9G13680' => 'aar', 'Aa31LG9G14920' => 'aar', 'Aa31LG9G6650' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4977' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5467' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3254' => 'aag', 'Actinidia02578' => 'ach', 'Actinidia07693' => 'ach', 'Actinidia08413' => 'ach', 'Actinidia08414' => 'ach', 'Actinidia15289' => 'ach', 'Actinidia19871' => 'ach', 'Actinidia21475' => 'ach', 'Actinidia22576' => 'ach', 'Actinidia28327' => 'ach', 'Actinidia32491' => 'ach', 'Actinidia39463' => 'ach', 'Actinidia39571' => 'ach', 'Ah.01g013750' => 'amhyb', 'Ah.01g023210' => 'amhyb', 'Ah.04g164850' => 'amhyb', 'Ah.05g178060' => 'amhyb', 'Ah.07g204270' => 'amhyb', 'Ah.07g208480' => 'amhyb', 'Ah.09g237410' => 'amhyb', 'Ah.14g089460' => 'amhyb', 'AL1G41790' => 'aly', 'AL1G49050' => 'aly', 'AL1G53810' => 'aly', 'AL1G61400' => 'aly', 'AL4G18580' => 'aly', 'AL5G12510' => 'aly', 'AL5G12540' => 'aly', 'AL6G43230' => 'aly', 'AL7G10370' => 'aly', 'AL7G19250' => 'aly', 'AL8G12240' => 'aly', 'AL8G18540' => 'aly', 'Aqoxy1G02409' => 'aox', 'Aqoxy2G03993' => 'aox', 'Aqoxy3G03357' => 'aox', 'Aqoxy4G00785' => 'aox', 'Aqoxy5G02598' => 'aox', 'Aqoxy6G00132' => 'aox', 'Aqoxy7G01776' => 'aox', 'Aqoxy7G02316' => 'aox', 'Aqoxy7G03973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.12AFKW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B8730' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27IQR1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3F75VG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3RE0GA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41TCQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.527VTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FIR39' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5W8UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DA38EV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ63HS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H1I32C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HC27T5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4M8AP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7N3CZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9UVDZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LS1NQA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT1D4B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SKC4TM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCFV76' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF9Q1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQWD9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1ZM88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WE07RT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YCK7VH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJE6Q6' => 'arhy', 'AT1G28240' => 'ath', 'AT1G34550' => 'ath', 'AT1G53040' => 'ath', 'AT2G02910' => 'ath', 'AT4G09630' => 'ath', 'AT4G38500' => 'ath', 'AT5G42660' => 'ath', 'AT5G46220' => 'ath', 'ATR0152G026' => 'atr', 'ATR0564G343' => 'atr', 'ATR0706G151' => 'atr', 'ATR0733G207' => 'atr', 'ATR0751G234' => 'atr', 'ATR0807G048' => 'atr', 'ATR1091G084' => 'atr', 'Atru.chr10.1229' => 'acertr', 'Atru.chr10.1230' => 'acertr', 'Atru.chr10.1874' => 'acertr', 'Atru.chr11.1808' => 'acertr', 'Atru.chr13.1795' => 'acertr', 'Atru.chr13.570' => 'acertr', 'Atru.chr2.2608' => 'acertr', 'Atru.chr2.2609' => 'acertr', 'Atru.chr5.3428' => 'acertr', 'Atru.chr8.1171' => 'acertr', 'AUR62004651' => 'cqu', 'AUR62008675' => 'cqu', 'AUR62010014' => 'cqu', 'AUR62013004' => 'cqu', 'AUR62014825' => 'cqu', 'AUR62015015' => 'cqu', 'AUR62015151' => 'cqu', 'AUR62017020' => 'cqu', 'AUR62019422' => 'cqu', 'AUR62023570' => 'cqu', 'AUR62025571' => 'cqu', 'AUR62029098' => 'cqu', 'AUR62033863' => 'cqu', 'AUR62034296' => 'cqu', 'AUR62040075' => 'cqu', 'BcaB02g07334' => 'bca', 'BcaB02g10575' => 'bca', 'BcaB03g12119' => 'bca', 'BcaB03g12120' => 'bca', 'BcaB03g13945' => 'bca', 'BcaB04g17123' => 'bca', 'BcaB04g17867' => 'bca', 'BcaB04g19839' => 'bca', 'BcaB07g30317' => 'bca', 'BcaB07g32432' => 'bca', 'BcaB07g33362' => 'bca', 'BcaB08g36611' => 'bca', 'BcaC01g00028' => 'bca', 'BcaC01g01356' => 'bca', 'BcaC01g02034' => 'bca', 'BcaC01g06051' => 'bca', 'BcaC03g16839' => 'bca', 'BcaC03g17176' => 'bca', 'BcaC05g26829' => 'bca', 'BcaC06g31490' => 'bca', 'BcaC06g35344' => 'bca', 'BcaC06g36570' => 'bca', 'BcaC07g37537' => 'bca', 'BcaC08g43491' => 'bca', 'BcaC08g43773' => 'bca', 'BcaNung00234' => 'bca', 'BcaNung01982' => 'bca', 'BcaNung03707' => 'bca', 'BcaNung06454' => 'bca', 'BolC2t10762H' => 'bol', 'BolC2t11191H' => 'bol', 'BolC3t14322H' => 'bol', 'BolC3t19747H' => 'bol', 'BolC3t21425H' => 'bol', 'BolC4t27800H' => 'bol', 'BolC5t31423H' => 'bol', 'BolC6t35951H' => 'bol', 'BolC6t36282H' => 'bol', 'BolC7t40678H' => 'bol', 'BolC7t40679H' => 'bol', 'BolC7t42222H' => 'bol', 'BolC7t43492H' => 'bol', 'BolC7t46785H' => 'bol', 'BolC8t47853H' => 'bol', 'BolC9t56805H' => 'bol', 'BraA02t08000Z' => 'bra', 'BraA02t08341Z' => 'bra', 'BraA03t10936Z' => 'bra', 'BraA03t15657Z' => 'bra', 'BraA04t18100Z' => 'bra', 'BraA05t20523Z' => 'bra', 'BraA06t23353Z' => 'bra', 'BraA06t27473Z' => 'bra', 'BraA06t27769Z' => 'bra', 'BraA07t28928Z' => 'bra', 'BraA08t32236Z' => 'bra', 'BraA08t32841Z' => 'bra', 'BraA08t34524Z' => 'bra', 'BraA09t38742Z' => 'bra', 'BraA09t39295Z' => 'bra', 'C02p47180' => 'bna', 'C02p50990' => 'bna', 'C03p19360' => 'bna', 'C03p74950' => 'bna', 'C03p91000' => 'bna', 'C04p63260' => 'bna', 'C05p27050' => 'bna', 'C06p08750' => 'bna', 'C06p11490' => 'bna', 'C07p02820' => 'bna', 'C07p17180' => 'bna', 'C07p29440' => 'bna', 'C07p63730' => 'bna', 'C09p39260' => 'bna', 'CAN.G1164.34' => 'can', 'CAN.G1164.39' => 'can', 'CAN.G1530.3' => 'can', 'CAN.G162.61' => 'can', 'CAN.G176.6' => 'can', 'CAN.G289.49' => 'can', 'CAN.G370.21' => 'can', 'CAN.G370.22' => 'can', 'CAN.G371.117' => 'can', 'CAN.G58.37' => 'can', 'CAN.G588.98' => 'can', 'CANSAT21G2266' => 'cansat', 'CANSAT25G2799' => 'cansat', 'CANSAT35G0862' => 'cansat', 'CANSAT35G1704' => 'cansat', 'CANSAT35G1760' => 'cansat', 'CANSAT56G3971' => 'cansat', 'CANSAT56G4116' => 'cansat', 'CANSAT80G1259' => 'cansat', 'CARHR027730' => 'chi', 'CARHR033880' => 'chi', 'CARHR043270' => 'chi', 'CARHR145330' => 'chi', 'CARHR145340' => 'chi', 'CARHR175570' => 'chi', 'CARHR181570' => 'chi', 'CARHR258470' => 'chi', 'CARHR260490' => 'chi', 'CARHR294220' => 'chi', 'Carub.0001s2668' => 'cru', 'Carub.0001s3257' => 'cru', 'Carub.0001s4220' => 'cru', 'Carub.0005s0179' => 'cru', 'Carub.0006s2807' => 'cru', 'Carub.0007s0039' => 'cru', 'Carub.0008s0169' => 'cru', 'Carub.0008s0636' => 'cru', 'Ca_00338_v3' => 'car', 'Ca_00542_v3' => 'car', 'Ca_01844_v3' => 'car', 'Ca_10611_v3' => 'car', 'Ca_13326_v3' => 'car', 'Ca_17944_v3' => 'car', 'Ca_18546_v3' => 'car', 'Ca_24219_v3' => 'car', 'Ca_29972_v3' => 'car', 'CBR_g3681' => 'cbr', 'CBR_g40021' => 'cbr', 'Cc01_g08140' => 'ccan', 'Cc02_g13410' => 'ccan', 'Cc02_g37480' => 'ccan', 'Cc05_g12030' => 'ccan', 'Cc09_g03370' => 'ccan', 'Cc09_g10300' => 'ccan', 'Cc10_g03530' => 'ccan', 'Cc10_g11380' => 'ccan', 'CDE01G0176' => 'cde', 'CDE02G0675' => 'cde', 'CDE02G0942' => 'cde', 'CDE02G1153' => 'cde', 'CDE02G4177' => 'cde', 'CDE04G2117' => 'cde', 'CDE04G2736' => 'cde', 'CDE08G1161' => 'cde', 'CDE09G1238' => 'cde', 'Cfa000467' => 'cfa', 'Cfa000947' => 'cfa', 'Cfa004969' => 'cfa', 'Cfa005284' => 'cfa', 'Cfa008993' => 'cfa', 'Cfa018187' => 'cfa', 'Cfa018454' => 'cfa', 'Cfa020585' => 'cfa', 'Ciclev10000424m.g' => 'ccl', 'Ciclev10003605m.g' => 'ccl', 'Ciclev10007828m.g' => 'ccl', 'Ciclev10014620m.g' => 'ccl', 'Ciclev10015169m.g' => 'ccl', 'Ciclev10018291m.g' => 'ccl', 'Ciclev10028256m.g' => 'ccl', 'Ciclev10033822m.g' => 'ccl', 'CiPaw.05G060300' => 'cil', 'CiPaw.05G085000' => 'cil', 'CiPaw.06G083700' => 'cil', 'CiPaw.06G120300' => 'cil', 'CiPaw.09G060500' => 'cil', 'CiPaw.09G123800' => 'cil', 'CiPaw.11G169700' => 'cil', 'CiPaw.12G118300' => 'cil', 'CiPaw.15G071000' => 'cil', 'CiPaw.15G081900' => 'cil', 'ClCG01G024610' => 'cla', 'ClCG03G006070' => 'cla', 'ClCG05G019250' => 'cla', 'ClCG09G009500' => 'cla', 'ClCG11G008200' => 'cla', 'ClCG11G018080' => 'cla', 'COL.COLO4_17373' => 'col', 'COL.COLO4_22994' => 'col', 'COL.COLO4_26389' => 'col', 'COL.COLO4_27170' => 'col', 'COL.COLO4_31074' => 'col', 'COL.COLO4_31465' => 'col', 'COL.COLO4_36438' => 'col', 'COL.COLO4_36439' => 'col', 'Cpa.g.c38781' => 'cpa', 'Cpa.g.sc128.12' => 'cpa', 'Cpa.g.sc166.7' => 'cpa', 'Cpa.g.sc166.8' => 'cpa', 'Cpa.g.sc20.111' => 'cpa', 'Cpa.g.sc27.31' => 'cpa', 'Cpa.g.sc64.36' => 'cpa', 'Cpa.g.sc64.37' => 'cpa', 'Cpa.g.sc66.49' => 'cpa', 'Cpa.g.sc80.64' => 'cpa', 'CsaV3_1G012320' => 'csa', 'CsaV3_2G008480' => 'csa', 'CsaV3_2G033450' => 'csa', 'CsaV3_3G044830' => 'csa', 'CsaV3_4G033710' => 'csa', 'CsaV3_6G051730' => 'csa', 'CsaV3_7G025350' => 'csa', 'CSS0001067' => 'camsi', 'CSS0005996' => 'camsi', 'CSS0006590' => 'camsi', 'CSS0009673' => 'camsi', 'CSS0010201' => 'camsi', 'CSS0010549' => 'camsi', 'CSS0011364' => 'camsi', 'CSS0014473' => 'camsi', 'CSS0014961' => 'camsi', 'CSS0020191' => 'camsi', 'CSS0021165' => 'camsi', 'CSS0022306' => 'camsi', 'CSS0030591' => 'camsi', 'CSS0030696' => 'camsi', 'CSS0032653' => 'camsi', 'CSS0037487' => 'camsi', 'CSS0041102' => 'camsi', 'CSS0041261' => 'camsi', 'CSS0046246' => 'camsi', 'CSS0049256' => 'camsi', 'DCAR_004075' => 'dca', 'DCAR_011538' => 'dca', 'DCAR_019553' => 'dca', 'DCAR_020952' => 'dca', 'DCAR_021739' => 'dca', 'DCAR_027407' => 'dca', 'DCAR_027913' => 'dca', 'DCAR_028066' => 'dca', 'Dinv05899' => 'din', 'Dinv07563' => 'din', 'Dinv08010' => 'din', 'Dinv14125' => 'din', 'Dinv20172' => 'din', 'Dinv30743' => 'din', 'Dinv31229' => 'din', 'Dinv34162' => 'din', 'Dinv36028' => 'din', 'Dinv39368' => 'din', 'Dinv40565' => 'din', 'Dinv41706' => 'din', 'Duzib052G0089' => 'dzi', 'Duzib116G0641' => 'dzi', 'Duzib132G0069' => 'dzi', 'Duzib132G1219' => 'dzi', 'Duzib147G0278' => 'dzi', 'Duzib160G0480' => 'dzi', 'Duzib170G0661' => 'dzi', 'Duzib177G0591' => 'dzi', 'Duzib187G1353' => 'dzi', 'Duzib192G0858' => 'dzi', 'Duzib192G0883' => 'dzi', 'Duzib213G0506' => 'dzi', 'Duzib235G0289' => 'dzi', 'Duzib251G0422' => 'dzi', 'ECA232G3898' => 'eca', 'ECA233G5950' => 'eca', 'ECA234G1699' => 'eca', 'ECA234G2421' => 'eca', 'ECA236G0426' => 'eca', 'ECA236G4331' => 'eca', 'ECA248G2573' => 'eca', 'EL10Ac1g00077' => 'bvu', 'EL10Ac1g01746' => 'bvu', 'EL10Ac2g03464' => 'bvu', 'EL10Ac4g08176' => 'bvu', 'EL10Ac7g17521' => 'bvu', 'EL10Ac8g20386' => 'bvu', 'EL10Ac9g21343' => 'bvu', 'EL10Ac9g22688' => 'bvu', 'Eucgr.B03434' => 'egr', 'Eucgr.D00618' => 'egr', 'Eucgr.E02395' => 'egr', 'Eucgr.F01129' => 'egr', 'Eucgr.F02622' => 'egr', 'Eucgr.F04207' => 'egr', 'FAN01G0570' => 'fan', 'FAN03G3351' => 'fan', 'FAN06G3702' => 'fan', 'FAN07G2149' => 'fan', 'FAN10G3758' => 'fan', 'FAN11G1170' => 'fan', 'FAN11G2050' => 'fan', 'FAN11G2724' => 'fan', 'FAN12G1700' => 'fan', 'FAN12G2028' => 'fan', 'FAN15G1160' => 'fan', 'FAN15G3063' => 'fan', 'FAN16G2540' => 'fan', 'FAN16G3077' => 'fan', 'FAN16G3624' => 'fan', 'FAN17G0221' => 'fan', 'FAN20G2492' => 'fan', 'FAN20G2905' => 'fan', 'FAN21G0548' => 'fan', 'FAN21G1300' => 'fan', 'FAN22G0077' => 'fan', 'FAN22G1315' => 'fan', 'FAN24G1280' => 'fan', 'FAN24G1445' => 'fan', 'FAN24G3527' => 'fan', 'FAN25G0464' => 'fan', 'FAN25G2885' => 'fan', 'FAN25G3270' => 'fan', 'FAN27G1101' => 'fan', 'FAN27G2846' => 'fan', 'FAN27G3524' => 'fan', 'FvH4_2g11770' => 'fve', 'FvH4_2g15630' => 'fve', 'FvH4_3g05570' => 'fve', 'FvH4_3g09110' => 'fve', 'FvH4_3g19940' => 'fve', 'FvH4_4g04821' => 'fve', 'FvH4_4g31480' => 'fve', 'FvH4_7g01740' => 'fve', 'Glyma.05G130400' => 'gma', 'Glyma.05G156400' => 'gma', 'Glyma.07G197000' => 'gma', 'Glyma.08G085151' => 'gma', 'Glyma.08G114500' => 'gma', 'Glyma.08G300400' => 'gma', 'Glyma.10G215800' => 'gma', 'Glyma.12G224400' => 'gma', 'Glyma.13G179300' => 'gma', 'Glyma.13G218151' => 'gma', 'Glyma.13G238800' => 'gma', 'Glyma.13G276900' => 'gma', 'Glyma.14G078200' => 'gma', 'Glyma.15G074500' => 'gma', 'Glyma.15G094100' => 'gma', 'Glyma.17G247200' => 'gma', 'Glyma.18G120100' => 'gma', 'Glyma.20G176000' => 'gma', 'Gohir.A01G063600' => 'ghi', 'Gohir.A01G170301' => 'ghi', 'Gohir.A02G060500' => 'ghi', 'Gohir.A05G133850' => 'ghi', 'Gohir.A05G161400' => 'ghi', 'Gohir.A06G012900' => 'ghi', 'Gohir.A06G035901' => 'ghi', 'Gohir.A06G127100' => 'ghi', 'Gohir.A06G210500' => 'ghi', 'Gohir.A08G008650' => 'ghi', 'Gohir.A09G072700' => 'ghi', 'Gohir.A09G088301' => 'ghi', 'Gohir.A10G040600' => 'ghi', 'Gohir.A12G036300' => 'ghi', 'Gohir.A12G143350' => 'ghi', 'Gohir.A12G165500' => 'ghi', 'Gohir.A13G145700' => 'ghi', 'Gohir.D01G050000' => 'ghi', 'Gohir.D01G051366' => 'ghi', 'Gohir.D01G161350' => 'ghi', 'Gohir.D02G065900' => 'ghi', 'Gohir.D05G164200' => 'ghi', 'Gohir.D05G355500' => 'ghi', 'Gohir.D06G010400' => 'ghi', 'Gohir.D06G111250' => 'ghi', 'Gohir.D06G132000' => 'ghi', 'Gohir.D06G210500' => 'ghi', 'Gohir.D07G165675' => 'ghi', 'Gohir.D08G062240' => 'ghi', 'Gohir.D08G086101' => 'ghi', 'Gohir.D08G138060' => 'ghi', 'Gohir.D09G072300' => 'ghi', 'Gohir.D10G041400' => 'ghi', 'Gohir.D11G191020' => 'ghi', 'Gohir.D11G212066' => 'ghi', 'Gohir.D12G036300' => 'ghi', 'Gohir.D12G168600' => 'ghi', 'Gohir.D13G150600' => 'ghi', 'Gorai.001G057300' => 'gra', 'Gorai.002G069900' => 'gra', 'Gorai.002G200000' => 'gra', 'Gorai.003G067600' => 'gra', 'Gorai.005G074800' => 'gra', 'Gorai.006G087300' => 'gra', 'Gorai.008G037500' => 'gra', 'Gorai.008G181400' => 'gra', 'Gorai.009G169400' => 'gra', 'Gorai.009G387900' => 'gra', 'Gorai.010G013300' => 'gra', 'Gorai.010G153800' => 'gra', 'Gorai.010G255800' => 'gra', 'Gorai.011G043700' => 'gra', 'Gorai.011G198900' => 'gra', 'Gorai.013G168400' => 'gra', 'GSVIVG01005212001' => 'vvi', 'GSVIVG01006163001' => 'vvi', 'GSVIVG01009625001' => 'vvi', 'GSVIVG01014338001' => 'vvi', 'GSVIVG01020005001' => 'vvi', 'GSVIVG01021450001' => 'vvi', 'GSVIVG01023975001' => 'vvi', 'GSVIVG01034490001' => 'vvi', 'HanXRQChr04g0112071' => 'han', 'HanXRQChr05g0131151' => 'han', 'HanXRQChr09g0262371' => 'han', 'HanXRQChr09g0268401' => 'han', 'HanXRQChr10g0279241' => 'han', 'HanXRQChr10g0297961' => 'han', 'HanXRQChr11g0326231' => 'han', 'HanXRQChr11g0328471' => 'han', 'HanXRQChr16g0507941' => 'han', 'HanXRQChr17g0560211' => 'han', 'Haze_02108' => 'cav', 'Haze_02428' => 'cav', 'Haze_05593' => 'cav', 'Haze_06448' => 'cav', 'Haze_09427' => 'cav', 'Haze_12022' => 'cav', 'Haze_17612' => 'cav', 'Haze_17928' => 'cav', 'Hma1.2p1_0032F.1_g019250' => 'hma', 'Hma1.2p1_0163F.1_g072690' => 'hma', 'Hma1.2p1_0265F.1_g106710' => 'hma', 'Hma1.2p1_0286F.1_g113970' => 'hma', 'Hma1.2p1_0363F.1_g136640' => 'hma', 'Hma1.2p1_0584F.1_g183470' => 'hma', 'Hma1.2p1_0885F.1_g232570' => 'hma', 'HPP92_006022' => 'vpl', 'HPP92_007320' => 'vpl', 'HPP92_011521' => 'vpl', 'HPP92_019387' => 'vpl', 'HPP92_024038' => 'vpl', 'Hund05891' => 'sun', 'Hund06450' => 'sun', 'Hund12053' => 'sun', 'Hund16800' => 'sun', 'Hund21222' => 'sun', 'Hund22896' => 'sun', 'Hund23746' => 'sun', 'Hund27083' => 'sun', 'Lalb_Chr02g0141831' => 'lal', 'Lalb_Chr02g0141841' => 'lal', 'Lalb_Chr05g0220411' => 'lal', 'Lalb_Chr06g0162081' => 'lal', 'Lalb_Chr09g0327651' => 'lal', 'Lalb_Chr13g0295051' => 'lal', 'Lalb_Chr15g0086801' => 'lal', 'Lalb_Chr16g0383781' => 'lal', 'Lalb_Chr16g0383791' => 'lal', 'Lalb_Chr18g0055441' => 'lal', 'Lalb_Chr18g0059611' => 'lal', 'Lalb_Chr20g0109661' => 'lal', 'Lalb_Chr20g0109831' => 'lal', 'Lalb_Chr20g0121871' => 'lal', 'Lalb_Chr22g0355361' => 'lal', 'Lalb_Chr25g0286371' => 'lal', 'Lj1A1187G43' => 'lonja', 'Lj1A1205T50' => 'lonja', 'Lj1A800G33' => 'lonja', 'Lj1C1187T7' => 'lonja', 'Lj1C843T11' => 'lonja', 'Lj1g0010940' => 'lja', 'Lj2A288T69' => 'lonja', 'Lj3g0024276' => 'lja', 'Lj4A47T76' => 'lonja', 'Lj4g0005805' => 'lja', 'Lj4g0006097' => 'lja', 'Lj4g0008528' => 'lja', 'Lj4g0024907' => 'lja', 'Lj5g0012472' => 'lja', 'Lj5g0018648' => 'lja', 'Lj6C789G1' => 'lonja', 'Lj6g0004000' => 'lja', 'Lj7A292G67' => 'lonja', 'Lj7A292T64' => 'lonja', 'Lj9A400T58' => 'lonja', 'Lsat_1_v5_gn_1_126181' => 'lsa', 'Lsat_1_v5_gn_4_123041' => 'lsa', 'Lsat_1_v5_gn_4_133620' => 'lsa', 'Lsat_1_v5_gn_4_53221' => 'lsa', 'Lsat_1_v5_gn_4_71961' => 'lsa', 'Lsat_1_v5_gn_7_105241' => 'lsa', 'Lsat_1_v5_gn_7_21361' => 'lsa', 'Lsat_1_v5_gn_7_28860' => 'lsa', 'Lsat_1_v5_gn_7_31260' => 'lsa', 'Lsat_1_v5_gn_8_52801' => 'lsa', 'Manes.02G191400' => 'mes', 'Manes.03G110100' => 'mes', 'Manes.04G071100' => 'mes', 'Manes.05G100500' => 'mes', 'Manes.05G164700' => 'mes', 'Manes.15G087000' => 'mes', 'Manes.15G121500' => 'mes', 'Manes.16G028300' => 'mes', 'Manes.17G046100' => 'mes', 'Manes.17G069800' => 'mes', 'Manes.18G100500' => 'mes', 'Mapoly0002s0109' => 'mpo', 'Mapoly0024s0007' => 'mpo', 'Mapoly0089s0032' => 'mpo', 'MBI04_g42241_MAGBIO' => 'mbi', 'MBI05_g11988_MAGBIO' => 'mbi', 'MBI05_g35452_MAGBIO' => 'mbi', 'MBI07_g30179_MAGBIO' => 'mbi', 'MBI07_g35859_MAGBIO' => 'mbi', 'MBI07_g35860_MAGBIO' => 'mbi', 'MBI07_g37166_MAGBIO' => 'mbi', 'MBI08_g18172_MAGBIO' => 'mbi', 'MBI09_g08441_MAGBIO' => 'mbi', 'MBI13_g01676_MAGBIO' => 'mbi', 'MBI14_g42955_MAGBIO' => 'mbi', 'MBI16_g13161_MAGBIO' => 'mbi', 'MBI17_g27204_MAGBIO' => 'mbi', 'MBI19_g21595_MAGBIO' => 'mbi', 'MD00G1148400' => 'mdo', 'MD02G1301200' => 'mdo', 'MD03G1227800' => 'mdo', 'MD05G1041100' => 'mdo', 'MD05G1124800' => 'mdo', 'MD05G1284000' => 'mdo', 'MD05G1338800' => 'mdo', 'MD05G1338900' => 'mdo', 'MD07G1022800' => 'mdo', 'MD10G1047500' => 'mdo', 'MD10G1127500' => 'mdo', 'MD10G1262300' => 'mdo', 'MD10G1293800' => 'mdo', 'MD16G1074300' => 'mdo', 'Medtr1g021670' => 'mtr', 'Medtr1g096320' => 'mtr', 'Medtr2g013690' => 'mtr', 'Medtr2g019450' => 'mtr', 'Medtr2g085170' => 'mtr', 'Medtr4g088785' => 'mtr', 'Medtr8g055930' => 'mtr', 'Medtr8g085850' => 'mtr', 'MELO3C002605.2' => 'cme', 'MELO3C003891.2' => 'cme', 'MELO3C004012.2' => 'cme', 'MELO3C007134.2' => 'cme', 'MELO3C008118.2' => 'cme', 'MELO3C016700.2' => 'cme', 'MELO3C024127.2' => 'cme', 'MELO3C033361.2' => 'cme', 'MELO3C033362.2' => 'cme', 'Migut.C00430' => 'egut', 'Migut.C01246' => 'egut', 'Migut.E00101' => 'egut', 'Migut.H01486' => 'egut', 'Migut.H01939' => 'egut', 'Migut.K00360' => 'egut', 'Migut.M00910' => 'egut', 'Migut.M01139' => 'egut', 'Migut.N02677' => 'egut', 'MSTRG.13252' => 'ama', 'MSTRG.14701' => 'ama', 'MSTRG.1521' => 'ama', 'MSTRG.15884' => 'ama', 'MSTRG.16242' => 'ama', 'MSTRG.22285' => 'ama', 'MSTRG.22444' => 'ama', 'MSTRG.2349' => 'ama', 'MSTRG.26308' => 'ama', 'MSTRG.28296' => 'ama', 'MSTRG.9895' => 'ama', 'Nitab4.5_0000110g0060' => 'nta', 'Nitab4.5_0000420g0130' => 'nta', 'Nitab4.5_0000422g0030' => 'nta', 'Nitab4.5_0000560g0180' => 'nta', 'Nitab4.5_0000703g0100' => 'nta', 'Nitab4.5_0000786g0200' => 'nta', 'Nitab4.5_0001336g0020' => 'nta', 'Nitab4.5_0001796g0030' => 'nta', 'Nitab4.5_0003348g0060' => 'nta', 'Nitab4.5_0003698g0040' => 'nta', 'Nitab4.5_0003942g0090' => 'nta', 'Nitab4.5_0004775g0070' => 'nta', 'Nitab4.5_0004864g0030' => 'nta', 'Nitab4.5_0005615g0020' => 'nta', 'Nitab4.5_0009288g0030' => 'nta', 'Nitab4.5_0009341g0010' => 'nta', 'Nitab4.5_0009535g0010' => 'nta', 'Nn1g03995' => 'nnu', 'Nn1g04100' => 'nnu', 'Nn1g06530' => 'nnu', 'Nn3g16404' => 'nnu', 'Nn3g17212' => 'nnu', 'Nn3g20776' => 'nnu', 'Nn3g21923' => 'nnu', 'Nn5g27737' => 'nnu', 'Nn5g29461' => 'nnu', 'Nn7g38355' => 'nnu', 'Nn8g39873' => 'nnu', 'Oeu000548.2' => 'oeu', 'Oeu004672.1' => 'oeu', 'Oeu015605.2' => 'oeu', 'Oeu016092.1' => 'oeu', 'Oeu017879.3' => 'oeu', 'Oeu024910.1' => 'oeu', 'Oeu028965.1' => 'oeu', 'Oeu031269.1' => 'oeu', 'Oeu031270.1' => 'oeu', 'Oeu032535.1' => 'oeu', 'Oeu034151.1' => 'oeu', 'Oeu034152.1' => 'oeu', 'Oeu034588.2' => 'oeu', 'Oeu050846.1' => 'oeu', 'Oeu050849.2' => 'oeu', 'Oeu051063.2' => 'oeu', 'Oeu052368.1' => 'oeu', 'Oeu052370.1' => 'oeu', 'Os01g0210400' => 'osa', 'Os01g0304300' => 'osa', 'Os01g0749100' => 'osa', 'Os02g0745800' => 'osa', 'Os03g0769050' => 'osa', 'Os05g0531500' => 'osa', 'Os06g0724300' => 'osa', 'Os11g0198100' => 'osa', 'Peaxi162Scf00069g01425' => 'pax', 'Peaxi162Scf00280g00811' => 'pax', 'Peaxi162Scf00310g00615' => 'pax', 'Peaxi162Scf00362g00542' => 'pax', 'Peaxi162Scf00461g00310' => 'pax', 'Peaxi162Scf00530g00118' => 'pax', 'Peaxi162Scf00541g00057' => 'pax', 'Peaxi162Scf00661g00017' => 'pax', 'Peaxi162Scf00926g00027' => 'pax', 'Peaxi162Scf01064g00263' => 'pax', 'Peaxi162Scf01211g00135' => 'pax', 'PGR004G2336' => 'pgr', 'PGR042G0327' => 'pgr', 'PGR042G1957' => 'pgr', 'PGR042G2003' => 'pgr', 'PGR042G3929' => 'pgr', 'PGR083G1137' => 'pgr', 'PGR083G1364' => 'pgr', 'PGSC0003DMG400003381' => 'stu', 'PGSC0003DMG400003417' => 'stu', 'PGSC0003DMG400008981' => 'stu', 'PGSC0003DMG400012417' => 'stu', 'PGSC0003DMG400012823' => 'stu', 'PGSC0003DMG400016885' => 'stu', 'PGSC0003DMG400022812' => 'stu', 'PGSC0003DMG400029726' => 'stu', 'PGSC0003DMG401009243' => 'stu', 'PGSC0003DMG401031505' => 'stu', 'PGSC0003DMG402031505' => 'stu', 'Phvul.001G017600' => 'pvu', 'Phvul.002G193500' => 'pvu', 'Phvul.002G228900' => 'pvu', 'Phvul.002G236800' => 'pvu', 'Phvul.003G049500' => 'pvu', 'Phvul.005G072000' => 'pvu', 'Phvul.006G164800' => 'pvu', 'Phvul.006G185100' => 'pvu', 'Phvul.007G090000' => 'pvu', 'Potri.001G399800' => 'ptr', 'Potri.002G149900' => 'ptr', 'Potri.004G044100' => 'ptr', 'Potri.004G177600' => 'ptr', 'Potri.009G138000' => 'ptr', 'Potri.010G094000' => 'ptr', 'Potri.011G053000' => 'ptr', 'Potri.011G119300' => 'ptr', 'Potri.013G113700' => 'ptr', 'Potri.018G107800' => 'ptr', 'Potri.019G084100' => 'ptr', 'Pp3c14_23720' => 'ppa', 'Pp3c16_6340' => 'ppa', 'Pp3c23_13420' => 'ppa', 'Pp3c24_2740' => 'ppa', 'Pp3c25_860' => 'ppa', 'Pp3c8_21750' => 'ppa', 'Prupe.1G273000' => 'ppe', 'Prupe.1G273700' => 'ppe', 'Prupe.1G274100' => 'ppe', 'Prupe.2G023300' => 'ppe', 'Prupe.4G048000' => 'ppe', 'Prupe.4G080400' => 'ppe', 'Prupe.4G181200' => 'ppe', 'Prupe.8G056900' => 'ppe', 'Prupe.8G168700' => 'ppe', 'Psat1g189080' => 'psa', 'Psat1g204760' => 'psa', 'Psat4g175560' => 'psa', 'Psat4g177720' => 'psa', 'Psat5g244240' => 'psa', 'Psat6g010720' => 'psa', 'Psat6g187200' => 'psa', 'Psat7g072040' => 'psa', 'PSO017G3501' => 'pso', 'PSO063G2148' => 'pso', 'PSO063G5608' => 'pso', 'PSO210G6392' => 'pso', 'PSO541G2319' => 'pso', 'PSO541G2836' => 'pso', 'PSO541G4012' => 'pso', 'PSO541G6253' => 'pso', 'PSO675G0580' => 'pso', 'PSO675G0856' => 'pso', 'PSO675G5635' => 'pso', 'PSO675G9157' => 'pso', 'PSO832G1660' => 'pso', 'PSO832G1969' => 'pso', 'QL02p007186' => 'qlo', 'QL02p033904' => 'qlo', 'QL03p064391' => 'qlo', 'QL05p040593' => 'qlo', 'QL05p058242' => 'qlo', 'QL08p021825' => 'qlo', 'QL11p004981' => 'qlo', 'RcHm_v2.0_Chr1g0318301' => 'rch', 'RcHm_v2.0_Chr4g0418501' => 'rch', 'RcHm_v2.0_Chr4g0439971' => 'rch', 'RcHm_v2.0_Chr5g0008541' => 'rch', 'RcHm_v2.0_Chr5g0014101' => 'rch', 'RcHm_v2.0_Chr5g0014131' => 'rch', 'RcHm_v2.0_Chr5g0033621' => 'rch', 'RcHm_v2.0_Chr6g0272041' => 'rch', 'RcHm_v2.0_Chr6g0278831' => 'rch', 'Rhsim02G0130400' => 'rsi', 'Rhsim02G0171100' => 'rsi', 'Rhsim05G0053000' => 'rsi', 'Rhsim05G0053100' => 'rsi', 'Rhsim06G0096500' => 'rsi', 'Rhsim06G0096600' => 'rsi', 'Rhsim06G0199100' => 'rsi', 'Rhsim12G0062300' => 'rsi', 'Rhsim12G0062800' => 'rsi', 'Sabra02G0118600' => 'sbr', 'Sabra04G0027300' => 'sbr', 'Sabra04G0119500' => 'sbr', 'Sabra08G0112500' => 'sbr', 'Sabra11G0036800' => 'sbr', 'Sabra11G0103800' => 'sbr', 'Sabra13G0096300' => 'sbr', 'Sabra16G0262300' => 'sbr', 'Sabra18G0091700' => 'sbr', 'Sabra19G0095400' => 'sbr', 'SalBow6G3080' => 'sbo', 'SalBow7G1157' => 'sbo', 'SalBow7G2123' => 'sbo', 'SalBow7G2285' => 'sbo', 'SalBow7G3537' => 'sbo', 'SalBow8G2947' => 'sbo', 'SalBow8G4463' => 'sbo', 'SalBow8G5466' => 'sbo', 'Sc01g0001750' => 'sci', 'Sc02g0006640' => 'sci', 'Sc02g0006670' => 'sci', 'Sc04g0008220' => 'sci', 'Sc05g0006190' => 'sci', 'Sc08g0002760' => 'sci', 'Sc17g0006170' => 'sci', 'Sc22g0002050' => 'sci', 'Sc23g0001190' => 'sci', 'Sc24g0000980' => 'sci', 'Sed0006245' => 'sed', 'Sed0007543' => 'sed', 'Sed0009411' => 'sed', 'Sed0010765' => 'sed', 'Sed0012944' => 'sed', 'Sed0014682' => 'sed', 'Sed0016174' => 'sed', 'Sed0016796' => 'sed', 'Sed0020317' => 'sed', 'Sed0021467' => 'sed', 'SEGI_01316' => 'sgi', 'SEGI_03374' => 'sgi', 'SEGI_16265' => 'sgi', 'SEGI_18569' => 'sgi', 'SEGI_20351' => 'sgi', 'SEGI_26395' => 'sgi', 'SEGI_29469' => 'sgi', 'SEGI_34771' => 'sgi', 'SEGI_36769' => 'sgi', 'SEGI_37139' => 'sgi', 'SGA_v2.0_scaffold100G29687' => 'sas', 'SGA_v2.0_scaffold118G32472' => 'sas', 'SGA_v2.0_scaffold14G07051' => 'sas', 'SGA_v2.0_scaffold183G39845' => 'sas', 'SGA_v2.0_scaffold1G00174' => 'sas', 'SGA_v2.0_scaffold22G09714' => 'sas', 'SGA_v2.0_scaffold333G48992' => 'sas', 'SGA_v2.0_scaffold46G17491' => 'sas', 'SGA_v2.0_scaffold49G18294' => 'sas', 'SGA_v2.0_scaffold63G21658' => 'sas', 'SHI01741' => 'shi', 'SHI05771' => 'shi', 'SHI18077' => 'shi', 'SHI20525' => 'shi', 'SHI20527' => 'shi', 'SHI20528' => 'shi', 'SMO172G0185' => 'smo', 'SMO198G0020' => 'smo', 'SMO351G0006' => 'smo', 'SMO356G0118' => 'smo', 'SMO358G0296' => 'smo', 'SMO367G0079' => 'smo', 'SMO367G1277' => 'smo', 'Solyc01g014220.3' => 'sly', 'Solyc01g111770.2' => 'sly', 'Solyc02g078180.3' => 'sly', 'Solyc03g006430.3' => 'sly', 'Solyc03g006456.1' => 'sly', 'Solyc03g079860.2' => 'sly', 'Solyc04g079770.3' => 'sly', 'Solyc05g007430.4' => 'sly', 'Solyc07g063150.3' => 'sly', 'Solyc08g016620.3' => 'sly', 'Solyc09g057590.3' => 'sly', 'Solyc09g057600.1' => 'sly', 'Solyc10g009050.3' => 'sly', 'Solyc11g017420.2' => 'sly', 'Sopen01g053810' => 'spe', 'Sopen02g023040' => 'spe', 'Sopen03g002440' => 'spe', 'Sopen04g033350' => 'spe', 'Sopen05g003310' => 'spe', 'Sopen07g004050' => 'spe', 'Sopen07g031340' => 'spe', 'Sopen08g006990' => 'spe', 'Sopen10g004830' => 'spe', 'Sopen11g009370' => 'spe', 'Sp1g24450' => 'spa', 'Sp1g29670' => 'spa', 'Sp1g39600' => 'spa', 'Sp2g11080' => 'spa', 'Sp2g13970' => 'spa', 'Sp4g16130' => 'spa', 'Sp6g13080' => 'spa', 'Sp7g37270' => 'spa', 'TAR371G0065' => 'tar', 'TAR376G0340' => 'tar', 'TAR376G0435' => 'tar', 'TAR381G0002' => 'tar', 'TAR381G1236' => 'tar', 'TAR624G0055' => 'tar', 'TAR624G0324' => 'tar', 'TAR624G0696' => 'tar', 'TAR624G0906' => 'tar', 'TAR625G0107' => 'tar', 'TAR626G0015' => 'tar', 'TAR626G1356' => 'tar', 'TAR627G0888' => 'tar', 'TAR628G0399' => 'tar', 'TAR628G1327' => 'tar', 'TAR629G2831' => 'tar', 'TAR629G2874' => 'tar', 'TAR633G1432' => 'tar', 'TAR633G2771' => 'tar', 'THA.LOC104803394' => 'tha', 'THA.LOC104805153' => 'tha', 'THA.LOC104806784' => 'tha', 'THA.LOC104810473' => 'tha', 'THA.LOC104813100' => 'tha', 'THA.LOC104814215' => 'tha', 'THA.LOC104815554' => 'tha', 'THA.LOC104820544' => 'tha', 'THA.LOC104824754' => 'tha', 'THA.LOC104827717' => 'tha', 'Thecc.02G031400' => 'tca', 'Thecc.02G055900' => 'tca', 'Thecc.02G350800' => 'tca', 'Thecc.06G150900' => 'tca', 'Thecc.06G186600' => 'tca', 'Thecc.07G089600' => 'tca', 'Thecc.08G020400' => 'tca', 'Thecc.08G182100' => 'tca', 'Thhalv10000873m.g' => 'esa', 'Thhalv10004185m.g' => 'esa', 'Thhalv10006981m.g' => 'esa', 'Thhalv10007204m.g' => 'esa', 'Thhalv10011374m.g' => 'esa', 'Thhalv10013482m.g' => 'esa', 'Thhalv10017801m.g' => 'esa', 'Thhalv10024983m.g' => 'esa', 'TPR.G12072' => 'tpr', 'TPR.G15769' => 'tpr', 'TPR.G16504' => 'tpr', 'TPR.G16506' => 'tpr', 'TPR.G24345' => 'tpr', 'TPR.G26666' => 'tpr', 'TPR.G27320' => 'tpr', 'TPR.G31819' => 'tpr', 'TPR.G38879' => 'tpr', 'TPR.G39015' => 'tpr', 'TPR.G8819' => 'tpr', 'TWI09G0924' => 'twi', 'TWI12G0811' => 'twi', 'TWI12G1294' => 'twi', 'TWI31G0150' => 'twi', 'TWI36G1262' => 'twi', 'TWI38G1287' => 'twi', 'TWI38G1633' => 'twi', 'TWI38G1982' => 'twi', 'TWI39G0116' => 'twi', 'TWI60G1011' => 'twi', 'TWI63G0171' => 'twi', 'TWI73G0839' => 'twi', 'TWI79G1511' => 'twi', 'unitig_0.g915' => 'ugi', 'unitig_0.g916' => 'ugi', 'unitig_21.g20219' => 'ugi', 'unitig_21.g20416' => 'ugi', 'unitig_578.g16132' => 'ugi', 'unitig_578.g16718' => 'ugi', 'unitig_62.g23481' => 'ugi', 'unitig_744.g24535' => 'ugi', 'unitig_749.g13525' => 'ugi', 'vmacro01248' => 'vma', 'vmacro02290' => 'vma', 'vmacro10946' => 'vma', 'vmacro11865' => 'vma', 'vmacro12493' => 'vma', 'vmacro17322' => 'vma', 'vmacro21599' => 'vma', 'vmacro23041' => 'vma', 'VMungo0251G0004' => 'vmu', 'VMungo0251G2639' => 'vmu', 'VMungo0251G2967' => 'vmu', 'VMungo0540G0864' => 'vmu', 'VMungo0540G1569' => 'vmu', 'VMungo0647G0317' => 'vmu', 'VMungo0720G1373' => 'vmu', 'VMungo0720G1508' => 'vmu', 'VMungo1080G0485' => 'vmu', 'VMungo1215G3177' => 'vmu', 'Zm00001eb112600' => 'zma', 'Zm00001eb120220' => 'zma', 'Zm00001eb153240' => 'zma', 'Zm00001eb168880' => 'zma', 'Zm00001eb213920' => 'zma', 'Zm00001eb228280' => 'zma', 'Zm00001eb254580' => 'zma', 'Zm00001eb272180' => 'zma', 'Zm00001eb293190' => 'zma', 'Zm00001eb322930' => 'zma', 'Zm00001eb353360' => 'zma', 'Zm00001eb353390' => 'zma', 'Zm00001eb353430' => 'zma', 'Zm00001eb353440' => 'zma', 'Zm00001eb353780' => 'zma' ) $gf_id = 'HOM05D000499' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000499' ) $data_identifier = 'HOM05D000499' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 29, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 12, 'amhyb' => (int) 8, 'aly' => (int) 12, 'aox' => (int) 9, 'arhy' => (int) 26, 'ath' => (int) 8, 'atr' => (int) 7, 'acertr' => (int) 10, 'cqu' => (int) 15, 'bca' => (int) 29, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 11, 'cansat' => (int) 8, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 9, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 8, 'cpa' => (int) 10, 'csa' => (int) 7, 'camsi' => (int) 20, 'dca' => (int) 8, 'din' => (int) 12, 'dzi' => (int) 14, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 6, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 38, 'gra' => (int) 16, 'vvi' => (int) 8, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 5, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 11, 'lja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 11, 'mpo' => (int) 3, 'mbi' => (int) 14, 'mdo' => (int) 14, 'mtr' => (int) 8, 'cme' => (int) 9, 'egut' => (int) 9, 'ama' => (int) 11, 'nta' => (int) 17, 'nnu' => (int) 11, 'oeu' => (int) 18, 'osa' => (int) 8, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 6, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 9, 'rsi' => (int) 9, 'sbr' => (int) 10, 'sbo' => (int) 8, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 10, 'sas' => (int) 10, 'shi' => (int) 6, 'smo' => (int) 7, 'sly' => (int) 14, 'spe' => (int) 10, 'spa' => (int) 8, 'tar' => (int) 19, 'tha' => (int) 10, 'tca' => (int) 8, 'esa' => (int) 8, 'tpr' => (int) 11, 'twi' => (int) 13, 'ugi' => (int) 9, 'vma' => (int) 8, 'vmu' => (int) 10, 'zma' => (int) 15 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb353780' $species_info = array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ) $local_species = 'lja' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000499', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1066', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p29780' => 'bna', 'A02p33180' => 'bna', 'A03p16470' => 'bna', 'A03p66010' => 'bna', 'A04p25970' => 'bna', 'A06p01270' => 'bna', 'A06p46080' => 'bna', 'A07p11400' => 'bna', 'A08p01840' => 'bna', 'A08p08230' => 'bna', 'A08p25740' => 'bna', 'A09p32070' => 'bna', 'A09p37830' => 'bna', 'A09p42840' => 'bna', 'A09p42850' => 'bna', 'Aa31LG10G2060' => 'aar', 'Aa31LG2G7410' => 'aar', 'Aa31LG6G10200' => 'aar', 'Aa31LG6G16680' => 'aar', 'Aa31LG6G8470' => 'aar', 'Aa31LG9G12730' => 'aar', 'Aa31LG9G13680' => 'aar', 'Aa31LG9G14920' => 'aar', 'Aa31LG9G6650' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4977' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5467' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3254' => 'aag', 'Actinidia02578' => 'ach', 'Actinidia07693' => 'ach', 'Actinidia08413' => 'ach', 'Actinidia08414' => 'ach', 'Actinidia15289' => 'ach', 'Actinidia19871' => 'ach', 'Actinidia21475' => 'ach', 'Actinidia22576' => 'ach', 'Actinidia28327' => 'ach', 'Actinidia32491' => 'ach', 'Actinidia39463' => 'ach', 'Actinidia39571' => 'ach', 'Ah.01g013750' => 'amhyb', 'Ah.01g023210' => 'amhyb', 'Ah.04g164850' => 'amhyb', 'Ah.05g178060' => 'amhyb', 'Ah.07g204270' => 'amhyb', 'Ah.07g208480' => 'amhyb', 'Ah.09g237410' => 'amhyb', 'Ah.14g089460' => 'amhyb', 'AL1G41790' => 'aly', 'AL1G49050' => 'aly', 'AL1G53810' => 'aly', 'AL1G61400' => 'aly', 'AL4G18580' => 'aly', 'AL5G12510' => 'aly', 'AL5G12540' => 'aly', 'AL6G43230' => 'aly', 'AL7G10370' => 'aly', 'AL7G19250' => 'aly', 'AL8G12240' => 'aly', 'AL8G18540' => 'aly', 'Aqoxy1G02409' => 'aox', 'Aqoxy2G03993' => 'aox', 'Aqoxy3G03357' => 'aox', 'Aqoxy4G00785' => 'aox', 'Aqoxy5G02598' => 'aox', 'Aqoxy6G00132' => 'aox', 'Aqoxy7G01776' => 'aox', 'Aqoxy7G02316' => 'aox', 'Aqoxy7G03973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.12AFKW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B8730' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27IQR1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3F75VG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3RE0GA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41TCQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.527VTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FIR39' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5W8UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DA38EV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ63HS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H1I32C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HC27T5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4M8AP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7N3CZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9UVDZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LS1NQA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT1D4B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SKC4TM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCFV76' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF9Q1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQWD9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1ZM88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WE07RT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YCK7VH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJE6Q6' => 'arhy', 'AT1G28240' => 'ath', 'AT1G34550' => 'ath', 'AT1G53040' => 'ath', 'AT2G02910' => 'ath', 'AT4G09630' => 'ath', 'AT4G38500' => 'ath', 'AT5G42660' => 'ath', 'AT5G46220' => 'ath', 'ATR0152G026' => 'atr', 'ATR0564G343' => 'atr', 'ATR0706G151' => 'atr', 'ATR0733G207' => 'atr', 'ATR0751G234' => 'atr', 'ATR0807G048' => 'atr', 'ATR1091G084' => 'atr', 'Atru.chr10.1229' => 'acertr', 'Atru.chr10.1230' => 'acertr', 'Atru.chr10.1874' => 'acertr', 'Atru.chr11.1808' => 'acertr', 'Atru.chr13.1795' => 'acertr', 'Atru.chr13.570' => 'acertr', 'Atru.chr2.2608' => 'acertr', 'Atru.chr2.2609' => 'acertr', 'Atru.chr5.3428' => 'acertr', 'Atru.chr8.1171' => 'acertr', 'AUR62004651' => 'cqu', 'AUR62008675' => 'cqu', 'AUR62010014' => 'cqu', 'AUR62013004' => 'cqu', 'AUR62014825' => 'cqu', 'AUR62015015' => 'cqu', 'AUR62015151' => 'cqu', 'AUR62017020' => 'cqu', 'AUR62019422' => 'cqu', 'AUR62023570' => 'cqu', 'AUR62025571' => 'cqu', 'AUR62029098' => 'cqu', 'AUR62033863' => 'cqu', 'AUR62034296' => 'cqu', 'AUR62040075' => 'cqu', 'BcaB02g07334' => 'bca', 'BcaB02g10575' => 'bca', 'BcaB03g12119' => 'bca', 'BcaB03g12120' => 'bca', 'BcaB03g13945' => 'bca', 'BcaB04g17123' => 'bca', 'BcaB04g17867' => 'bca', 'BcaB04g19839' => 'bca', 'BcaB07g30317' => 'bca', 'BcaB07g32432' => 'bca', 'BcaB07g33362' => 'bca', 'BcaB08g36611' => 'bca', 'BcaC01g00028' => 'bca', 'BcaC01g01356' => 'bca', 'BcaC01g02034' => 'bca', 'BcaC01g06051' => 'bca', 'BcaC03g16839' => 'bca', 'BcaC03g17176' => 'bca', 'BcaC05g26829' => 'bca', 'BcaC06g31490' => 'bca', 'BcaC06g35344' => 'bca', 'BcaC06g36570' => 'bca', 'BcaC07g37537' => 'bca', 'BcaC08g43491' => 'bca', 'BcaC08g43773' => 'bca', 'BcaNung00234' => 'bca', 'BcaNung01982' => 'bca', 'BcaNung03707' => 'bca', 'BcaNung06454' => 'bca', 'BolC2t10762H' => 'bol', 'BolC2t11191H' => 'bol', 'BolC3t14322H' => 'bol', 'BolC3t19747H' => 'bol', 'BolC3t21425H' => 'bol', 'BolC4t27800H' => 'bol', 'BolC5t31423H' => 'bol', 'BolC6t35951H' => 'bol', 'BolC6t36282H' => 'bol', 'BolC7t40678H' => 'bol', 'BolC7t40679H' => 'bol', 'BolC7t42222H' => 'bol', 'BolC7t43492H' => 'bol', 'BolC7t46785H' => 'bol', 'BolC8t47853H' => 'bol', 'BolC9t56805H' => 'bol', 'BraA02t08000Z' => 'bra', 'BraA02t08341Z' => 'bra', 'BraA03t10936Z' => 'bra', 'BraA03t15657Z' => 'bra', 'BraA04t18100Z' => 'bra', 'BraA05t20523Z' => 'bra', 'BraA06t23353Z' => 'bra', 'BraA06t27473Z' => 'bra', 'BraA06t27769Z' => 'bra', 'BraA07t28928Z' => 'bra', 'BraA08t32236Z' => 'bra', 'BraA08t32841Z' => 'bra', 'BraA08t34524Z' => 'bra', 'BraA09t38742Z' => 'bra', 'BraA09t39295Z' => 'bra', 'C02p47180' => 'bna', 'C02p50990' => 'bna', 'C03p19360' => 'bna', 'C03p74950' => 'bna', 'C03p91000' => 'bna', 'C04p63260' => 'bna', 'C05p27050' => 'bna', 'C06p08750' => 'bna', 'C06p11490' => 'bna', 'C07p02820' => 'bna', 'C07p17180' => 'bna', 'C07p29440' => 'bna', 'C07p63730' => 'bna', 'C09p39260' => 'bna', 'CAN.G1164.34' => 'can', 'CAN.G1164.39' => 'can', 'CAN.G1530.3' => 'can', 'CAN.G162.61' => 'can', 'CAN.G176.6' => 'can', 'CAN.G289.49' => 'can', 'CAN.G370.21' => 'can', 'CAN.G370.22' => 'can', 'CAN.G371.117' => 'can', 'CAN.G58.37' => 'can', 'CAN.G588.98' => 'can', 'CANSAT21G2266' => 'cansat', 'CANSAT25G2799' => 'cansat', 'CANSAT35G0862' => 'cansat', 'CANSAT35G1704' => 'cansat', 'CANSAT35G1760' => 'cansat', 'CANSAT56G3971' => 'cansat', 'CANSAT56G4116' => 'cansat', 'CANSAT80G1259' => 'cansat', 'CARHR027730' => 'chi', 'CARHR033880' => 'chi', 'CARHR043270' => 'chi', 'CARHR145330' => 'chi', 'CARHR145340' => 'chi', 'CARHR175570' => 'chi', 'CARHR181570' => 'chi', 'CARHR258470' => 'chi', 'CARHR260490' => 'chi', 'CARHR294220' => 'chi', 'Carub.0001s2668' => 'cru', 'Carub.0001s3257' => 'cru', 'Carub.0001s4220' => 'cru', 'Carub.0005s0179' => 'cru', 'Carub.0006s2807' => 'cru', 'Carub.0007s0039' => 'cru', 'Carub.0008s0169' => 'cru', 'Carub.0008s0636' => 'cru', 'Ca_00338_v3' => 'car', 'Ca_00542_v3' => 'car', 'Ca_01844_v3' => 'car', 'Ca_10611_v3' => 'car', 'Ca_13326_v3' => 'car', 'Ca_17944_v3' => 'car', 'Ca_18546_v3' => 'car', 'Ca_24219_v3' => 'car', 'Ca_29972_v3' => 'car', 'CBR_g3681' => 'cbr', 'CBR_g40021' => 'cbr', 'Cc01_g08140' => 'ccan', 'Cc02_g13410' => 'ccan', 'Cc02_g37480' => 'ccan', 'Cc05_g12030' => 'ccan', 'Cc09_g03370' => 'ccan', 'Cc09_g10300' => 'ccan', 'Cc10_g03530' => 'ccan', 'Cc10_g11380' => 'ccan', 'CDE01G0176' => 'cde', 'CDE02G0675' => 'cde', 'CDE02G0942' => 'cde', 'CDE02G1153' => 'cde', 'CDE02G4177' => 'cde', 'CDE04G2117' => 'cde', 'CDE04G2736' => 'cde', 'CDE08G1161' => 'cde', 'CDE09G1238' => 'cde', 'Cfa000467' => 'cfa', 'Cfa000947' => 'cfa', 'Cfa004969' => 'cfa', 'Cfa005284' => 'cfa', 'Cfa008993' => 'cfa', 'Cfa018187' => 'cfa', 'Cfa018454' => 'cfa', 'Cfa020585' => 'cfa', 'Ciclev10000424m.g' => 'ccl', 'Ciclev10003605m.g' => 'ccl', 'Ciclev10007828m.g' => 'ccl', 'Ciclev10014620m.g' => 'ccl', 'Ciclev10015169m.g' => 'ccl', 'Ciclev10018291m.g' => 'ccl', 'Ciclev10028256m.g' => 'ccl', 'Ciclev10033822m.g' => 'ccl', 'CiPaw.05G060300' => 'cil', 'CiPaw.05G085000' => 'cil', 'CiPaw.06G083700' => 'cil', 'CiPaw.06G120300' => 'cil', 'CiPaw.09G060500' => 'cil', 'CiPaw.09G123800' => 'cil', 'CiPaw.11G169700' => 'cil', 'CiPaw.12G118300' => 'cil', 'CiPaw.15G071000' => 'cil', 'CiPaw.15G081900' => 'cil', 'ClCG01G024610' => 'cla', 'ClCG03G006070' => 'cla', 'ClCG05G019250' => 'cla', 'ClCG09G009500' => 'cla', 'ClCG11G008200' => 'cla', 'ClCG11G018080' => 'cla', 'COL.COLO4_17373' => 'col', 'COL.COLO4_22994' => 'col', 'COL.COLO4_26389' => 'col', 'COL.COLO4_27170' => 'col', 'COL.COLO4_31074' => 'col', 'COL.COLO4_31465' => 'col', 'COL.COLO4_36438' => 'col', 'COL.COLO4_36439' => 'col', 'Cpa.g.c38781' => 'cpa', 'Cpa.g.sc128.12' => 'cpa', 'Cpa.g.sc166.7' => 'cpa', 'Cpa.g.sc166.8' => 'cpa', 'Cpa.g.sc20.111' => 'cpa', 'Cpa.g.sc27.31' => 'cpa', 'Cpa.g.sc64.36' => 'cpa', 'Cpa.g.sc64.37' => 'cpa', 'Cpa.g.sc66.49' => 'cpa', 'Cpa.g.sc80.64' => 'cpa', 'CsaV3_1G012320' => 'csa', 'CsaV3_2G008480' => 'csa', 'CsaV3_2G033450' => 'csa', 'CsaV3_3G044830' => 'csa', 'CsaV3_4G033710' => 'csa', 'CsaV3_6G051730' => 'csa', 'CsaV3_7G025350' => 'csa', 'CSS0001067' => 'camsi', 'CSS0005996' => 'camsi', 'CSS0006590' => 'camsi', 'CSS0009673' => 'camsi', 'CSS0010201' => 'camsi', 'CSS0010549' => 'camsi', 'CSS0011364' => 'camsi', 'CSS0014473' => 'camsi', 'CSS0014961' => 'camsi', 'CSS0020191' => 'camsi', 'CSS0021165' => 'camsi', 'CSS0022306' => 'camsi', 'CSS0030591' => 'camsi', 'CSS0030696' => 'camsi', 'CSS0032653' => 'camsi', 'CSS0037487' => 'camsi', 'CSS0041102' => 'camsi', 'CSS0041261' => 'camsi', 'CSS0046246' => 'camsi', 'CSS0049256' => 'camsi', 'DCAR_004075' => 'dca', 'DCAR_011538' => 'dca', 'DCAR_019553' => 'dca', 'DCAR_020952' => 'dca', 'DCAR_021739' => 'dca', 'DCAR_027407' => 'dca', 'DCAR_027913' => 'dca', 'DCAR_028066' => 'dca', 'Dinv05899' => 'din', 'Dinv07563' => 'din', 'Dinv08010' => 'din', 'Dinv14125' => 'din', 'Dinv20172' => 'din', 'Dinv30743' => 'din', 'Dinv31229' => 'din', 'Dinv34162' => 'din', 'Dinv36028' => 'din', 'Dinv39368' => 'din', 'Dinv40565' => 'din', 'Dinv41706' => 'din', 'Duzib052G0089' => 'dzi', 'Duzib116G0641' => 'dzi', 'Duzib132G0069' => 'dzi', 'Duzib132G1219' => 'dzi', 'Duzib147G0278' => 'dzi', 'Duzib160G0480' => 'dzi', 'Duzib170G0661' => 'dzi', 'Duzib177G0591' => 'dzi', 'Duzib187G1353' => 'dzi', 'Duzib192G0858' => 'dzi', 'Duzib192G0883' => 'dzi', 'Duzib213G0506' => 'dzi', 'Duzib235G0289' => 'dzi', 'Duzib251G0422' => 'dzi', 'ECA232G3898' => 'eca', 'ECA233G5950' => 'eca', 'ECA234G1699' => 'eca', 'ECA234G2421' => 'eca', 'ECA236G0426' => 'eca', 'ECA236G4331' => 'eca', 'ECA248G2573' => 'eca', 'EL10Ac1g00077' => 'bvu', 'EL10Ac1g01746' => 'bvu', 'EL10Ac2g03464' => 'bvu', 'EL10Ac4g08176' => 'bvu', 'EL10Ac7g17521' => 'bvu', 'EL10Ac8g20386' => 'bvu', 'EL10Ac9g21343' => 'bvu', 'EL10Ac9g22688' => 'bvu', 'Eucgr.B03434' => 'egr', 'Eucgr.D00618' => 'egr', 'Eucgr.E02395' => 'egr', 'Eucgr.F01129' => 'egr', 'Eucgr.F02622' => 'egr', 'Eucgr.F04207' => 'egr', 'FAN01G0570' => 'fan', 'FAN03G3351' => 'fan', 'FAN06G3702' => 'fan', 'FAN07G2149' => 'fan', 'FAN10G3758' => 'fan', 'FAN11G1170' => 'fan', 'FAN11G2050' => 'fan', 'FAN11G2724' => 'fan', 'FAN12G1700' => 'fan', 'FAN12G2028' => 'fan', 'FAN15G1160' => 'fan', 'FAN15G3063' => 'fan', 'FAN16G2540' => 'fan', 'FAN16G3077' => 'fan', 'FAN16G3624' => 'fan', 'FAN17G0221' => 'fan', 'FAN20G2492' => 'fan', 'FAN20G2905' => 'fan', 'FAN21G0548' => 'fan', 'FAN21G1300' => 'fan', 'FAN22G0077' => 'fan', 'FAN22G1315' => 'fan', 'FAN24G1280' => 'fan', 'FAN24G1445' => 'fan', 'FAN24G3527' => 'fan', 'FAN25G0464' => 'fan', 'FAN25G2885' => 'fan', 'FAN25G3270' => 'fan', 'FAN27G1101' => 'fan', 'FAN27G2846' => 'fan', 'FAN27G3524' => 'fan', 'FvH4_2g11770' => 'fve', 'FvH4_2g15630' => 'fve', 'FvH4_3g05570' => 'fve', 'FvH4_3g09110' => 'fve', 'FvH4_3g19940' => 'fve', 'FvH4_4g04821' => 'fve', 'FvH4_4g31480' => 'fve', 'FvH4_7g01740' => 'fve', 'Glyma.05G130400' => 'gma', 'Glyma.05G156400' => 'gma', 'Glyma.07G197000' => 'gma', 'Glyma.08G085151' => 'gma', 'Glyma.08G114500' => 'gma', 'Glyma.08G300400' => 'gma', 'Glyma.10G215800' => 'gma', 'Glyma.12G224400' => 'gma', 'Glyma.13G179300' => 'gma', 'Glyma.13G218151' => 'gma', 'Glyma.13G238800' => 'gma', 'Glyma.13G276900' => 'gma', 'Glyma.14G078200' => 'gma', 'Glyma.15G074500' => 'gma', 'Glyma.15G094100' => 'gma', 'Glyma.17G247200' => 'gma', 'Glyma.18G120100' => 'gma', 'Glyma.20G176000' => 'gma', 'Gohir.A01G063600' => 'ghi', 'Gohir.A01G170301' => 'ghi', 'Gohir.A02G060500' => 'ghi', 'Gohir.A05G133850' => 'ghi', 'Gohir.A05G161400' => 'ghi', 'Gohir.A06G012900' => 'ghi', 'Gohir.A06G035901' => 'ghi', 'Gohir.A06G127100' => 'ghi', 'Gohir.A06G210500' => 'ghi', 'Gohir.A08G008650' => 'ghi', 'Gohir.A09G072700' => 'ghi', 'Gohir.A09G088301' => 'ghi', 'Gohir.A10G040600' => 'ghi', 'Gohir.A12G036300' => 'ghi', 'Gohir.A12G143350' => 'ghi', 'Gohir.A12G165500' => 'ghi', 'Gohir.A13G145700' => 'ghi', 'Gohir.D01G050000' => 'ghi', 'Gohir.D01G051366' => 'ghi', 'Gohir.D01G161350' => 'ghi', 'Gohir.D02G065900' => 'ghi', 'Gohir.D05G164200' => 'ghi', 'Gohir.D05G355500' => 'ghi', 'Gohir.D06G010400' => 'ghi', 'Gohir.D06G111250' => 'ghi', 'Gohir.D06G132000' => 'ghi', 'Gohir.D06G210500' => 'ghi', 'Gohir.D07G165675' => 'ghi', 'Gohir.D08G062240' => 'ghi', 'Gohir.D08G086101' => 'ghi', 'Gohir.D08G138060' => 'ghi', 'Gohir.D09G072300' => 'ghi', 'Gohir.D10G041400' => 'ghi', 'Gohir.D11G191020' => 'ghi', 'Gohir.D11G212066' => 'ghi', 'Gohir.D12G036300' => 'ghi', 'Gohir.D12G168600' => 'ghi', 'Gohir.D13G150600' => 'ghi', 'Gorai.001G057300' => 'gra', 'Gorai.002G069900' => 'gra', 'Gorai.002G200000' => 'gra', 'Gorai.003G067600' => 'gra', 'Gorai.005G074800' => 'gra', 'Gorai.006G087300' => 'gra', 'Gorai.008G037500' => 'gra', 'Gorai.008G181400' => 'gra', 'Gorai.009G169400' => 'gra', 'Gorai.009G387900' => 'gra', 'Gorai.010G013300' => 'gra', 'Gorai.010G153800' => 'gra', 'Gorai.010G255800' => 'gra', 'Gorai.011G043700' => 'gra', 'Gorai.011G198900' => 'gra', 'Gorai.013G168400' => 'gra', 'GSVIVG01005212001' => 'vvi', 'GSVIVG01006163001' => 'vvi', 'GSVIVG01009625001' => 'vvi', 'GSVIVG01014338001' => 'vvi', 'GSVIVG01020005001' => 'vvi', 'GSVIVG01021450001' => 'vvi', 'GSVIVG01023975001' => 'vvi', 'GSVIVG01034490001' => 'vvi', 'HanXRQChr04g0112071' => 'han', 'HanXRQChr05g0131151' => 'han', 'HanXRQChr09g0262371' => 'han', 'HanXRQChr09g0268401' => 'han', 'HanXRQChr10g0279241' => 'han', 'HanXRQChr10g0297961' => 'han', 'HanXRQChr11g0326231' => 'han', 'HanXRQChr11g0328471' => 'han', 'HanXRQChr16g0507941' => 'han', 'HanXRQChr17g0560211' => 'han', 'Haze_02108' => 'cav', 'Haze_02428' => 'cav', 'Haze_05593' => 'cav', 'Haze_06448' => 'cav', 'Haze_09427' => 'cav', 'Haze_12022' => 'cav', 'Haze_17612' => 'cav', 'Haze_17928' => 'cav', 'Hma1.2p1_0032F.1_g019250' => 'hma', 'Hma1.2p1_0163F.1_g072690' => 'hma', 'Hma1.2p1_0265F.1_g106710' => 'hma', 'Hma1.2p1_0286F.1_g113970' => 'hma', 'Hma1.2p1_0363F.1_g136640' => 'hma', 'Hma1.2p1_0584F.1_g183470' => 'hma', 'Hma1.2p1_0885F.1_g232570' => 'hma', 'HPP92_006022' => 'vpl', 'HPP92_007320' => 'vpl', 'HPP92_011521' => 'vpl', 'HPP92_019387' => 'vpl', 'HPP92_024038' => 'vpl', 'Hund05891' => 'sun', 'Hund06450' => 'sun', 'Hund12053' => 'sun', 'Hund16800' => 'sun', 'Hund21222' => 'sun', 'Hund22896' => 'sun', 'Hund23746' => 'sun', 'Hund27083' => 'sun', 'Lalb_Chr02g0141831' => 'lal', 'Lalb_Chr02g0141841' => 'lal', 'Lalb_Chr05g0220411' => 'lal', 'Lalb_Chr06g0162081' => 'lal', 'Lalb_Chr09g0327651' => 'lal', 'Lalb_Chr13g0295051' => 'lal', 'Lalb_Chr15g0086801' => 'lal', 'Lalb_Chr16g0383781' => 'lal', 'Lalb_Chr16g0383791' => 'lal', 'Lalb_Chr18g0055441' => 'lal', 'Lalb_Chr18g0059611' => 'lal', 'Lalb_Chr20g0109661' => 'lal', 'Lalb_Chr20g0109831' => 'lal', 'Lalb_Chr20g0121871' => 'lal', 'Lalb_Chr22g0355361' => 'lal', 'Lalb_Chr25g0286371' => 'lal', 'Lj1A1187G43' => 'lonja', 'Lj1A1205T50' => 'lonja', 'Lj1A800G33' => 'lonja', 'Lj1C1187T7' => 'lonja', 'Lj1C843T11' => 'lonja', 'Lj1g0010940' => 'lja', 'Lj2A288T69' => 'lonja', 'Lj3g0024276' => 'lja', 'Lj4A47T76' => 'lonja', 'Lj4g0005805' => 'lja', 'Lj4g0006097' => 'lja', 'Lj4g0008528' => 'lja', 'Lj4g0024907' => 'lja', 'Lj5g0012472' => 'lja', 'Lj5g0018648' => 'lja', 'Lj6C789G1' => 'lonja', 'Lj6g0004000' => 'lja', 'Lj7A292G67' => 'lonja', 'Lj7A292T64' => 'lonja', 'Lj9A400T58' => 'lonja', 'Lsat_1_v5_gn_1_126181' => 'lsa', 'Lsat_1_v5_gn_4_123041' => 'lsa', 'Lsat_1_v5_gn_4_133620' => 'lsa', 'Lsat_1_v5_gn_4_53221' => 'lsa', 'Lsat_1_v5_gn_4_71961' => 'lsa', 'Lsat_1_v5_gn_7_105241' => 'lsa', 'Lsat_1_v5_gn_7_21361' => 'lsa', 'Lsat_1_v5_gn_7_28860' => 'lsa', 'Lsat_1_v5_gn_7_31260' => 'lsa', 'Lsat_1_v5_gn_8_52801' => 'lsa', 'Manes.02G191400' => 'mes', 'Manes.03G110100' => 'mes', 'Manes.04G071100' => 'mes', 'Manes.05G100500' => 'mes', 'Manes.05G164700' => 'mes', 'Manes.15G087000' => 'mes', 'Manes.15G121500' => 'mes', 'Manes.16G028300' => 'mes', 'Manes.17G046100' => 'mes', 'Manes.17G069800' => 'mes', 'Manes.18G100500' => 'mes', 'Mapoly0002s0109' => 'mpo', 'Mapoly0024s0007' => 'mpo', 'Mapoly0089s0032' => 'mpo', 'MBI04_g42241_MAGBIO' => 'mbi', 'MBI05_g11988_MAGBIO' => 'mbi', 'MBI05_g35452_MAGBIO' => 'mbi', 'MBI07_g30179_MAGBIO' => 'mbi', 'MBI07_g35859_MAGBIO' => 'mbi', 'MBI07_g35860_MAGBIO' => 'mbi', 'MBI07_g37166_MAGBIO' => 'mbi', 'MBI08_g18172_MAGBIO' => 'mbi', 'MBI09_g08441_MAGBIO' => 'mbi', 'MBI13_g01676_MAGBIO' => 'mbi', 'MBI14_g42955_MAGBIO' => 'mbi', 'MBI16_g13161_MAGBIO' => 'mbi', 'MBI17_g27204_MAGBIO' => 'mbi', 'MBI19_g21595_MAGBIO' => 'mbi', 'MD00G1148400' => 'mdo', 'MD02G1301200' => 'mdo', 'MD03G1227800' => 'mdo', 'MD05G1041100' => 'mdo', 'MD05G1124800' => 'mdo', 'MD05G1284000' => 'mdo', 'MD05G1338800' => 'mdo', 'MD05G1338900' => 'mdo', 'MD07G1022800' => 'mdo', 'MD10G1047500' => 'mdo', 'MD10G1127500' => 'mdo', 'MD10G1262300' => 'mdo', 'MD10G1293800' => 'mdo', 'MD16G1074300' => 'mdo', 'Medtr1g021670' => 'mtr', 'Medtr1g096320' => 'mtr', 'Medtr2g013690' => 'mtr', 'Medtr2g019450' => 'mtr', 'Medtr2g085170' => 'mtr', 'Medtr4g088785' => 'mtr', 'Medtr8g055930' => 'mtr', 'Medtr8g085850' => 'mtr', 'MELO3C002605.2' => 'cme', 'MELO3C003891.2' => 'cme', 'MELO3C004012.2' => 'cme', 'MELO3C007134.2' => 'cme', 'MELO3C008118.2' => 'cme', 'MELO3C016700.2' => 'cme', 'MELO3C024127.2' => 'cme', 'MELO3C033361.2' => 'cme', 'MELO3C033362.2' => 'cme', 'Migut.C00430' => 'egut', 'Migut.C01246' => 'egut', 'Migut.E00101' => 'egut', 'Migut.H01486' => 'egut', 'Migut.H01939' => 'egut', 'Migut.K00360' => 'egut', 'Migut.M00910' => 'egut', 'Migut.M01139' => 'egut', 'Migut.N02677' => 'egut', 'MSTRG.13252' => 'ama', 'MSTRG.14701' => 'ama', 'MSTRG.1521' => 'ama', 'MSTRG.15884' => 'ama', 'MSTRG.16242' => 'ama', 'MSTRG.22285' => 'ama', 'MSTRG.22444' => 'ama', 'MSTRG.2349' => 'ama', 'MSTRG.26308' => 'ama', 'MSTRG.28296' => 'ama', 'MSTRG.9895' => 'ama', 'Nitab4.5_0000110g0060' => 'nta', 'Nitab4.5_0000420g0130' => 'nta', 'Nitab4.5_0000422g0030' => 'nta', 'Nitab4.5_0000560g0180' => 'nta', 'Nitab4.5_0000703g0100' => 'nta', 'Nitab4.5_0000786g0200' => 'nta', 'Nitab4.5_0001336g0020' => 'nta', 'Nitab4.5_0001796g0030' => 'nta', 'Nitab4.5_0003348g0060' => 'nta', 'Nitab4.5_0003698g0040' => 'nta', 'Nitab4.5_0003942g0090' => 'nta', 'Nitab4.5_0004775g0070' => 'nta', 'Nitab4.5_0004864g0030' => 'nta', 'Nitab4.5_0005615g0020' => 'nta', 'Nitab4.5_0009288g0030' => 'nta', 'Nitab4.5_0009341g0010' => 'nta', 'Nitab4.5_0009535g0010' => 'nta', 'Nn1g03995' => 'nnu', 'Nn1g04100' => 'nnu', 'Nn1g06530' => 'nnu', 'Nn3g16404' => 'nnu', 'Nn3g17212' => 'nnu', 'Nn3g20776' => 'nnu', 'Nn3g21923' => 'nnu', 'Nn5g27737' => 'nnu', 'Nn5g29461' => 'nnu', 'Nn7g38355' => 'nnu', 'Nn8g39873' => 'nnu', 'Oeu000548.2' => 'oeu', 'Oeu004672.1' => 'oeu', 'Oeu015605.2' => 'oeu', 'Oeu016092.1' => 'oeu', 'Oeu017879.3' => 'oeu', 'Oeu024910.1' => 'oeu', 'Oeu028965.1' => 'oeu', 'Oeu031269.1' => 'oeu', 'Oeu031270.1' => 'oeu', 'Oeu032535.1' => 'oeu', 'Oeu034151.1' => 'oeu', 'Oeu034152.1' => 'oeu', 'Oeu034588.2' => 'oeu', 'Oeu050846.1' => 'oeu', 'Oeu050849.2' => 'oeu', 'Oeu051063.2' => 'oeu', 'Oeu052368.1' => 'oeu', 'Oeu052370.1' => 'oeu', 'Os01g0210400' => 'osa', 'Os01g0304300' => 'osa', 'Os01g0749100' => 'osa', 'Os02g0745800' => 'osa', 'Os03g0769050' => 'osa', 'Os05g0531500' => 'osa', 'Os06g0724300' => 'osa', 'Os11g0198100' => 'osa', 'Peaxi162Scf00069g01425' => 'pax', 'Peaxi162Scf00280g00811' => 'pax', 'Peaxi162Scf00310g00615' => 'pax', 'Peaxi162Scf00362g00542' => 'pax', 'Peaxi162Scf00461g00310' => 'pax', 'Peaxi162Scf00530g00118' => 'pax', 'Peaxi162Scf00541g00057' => 'pax', 'Peaxi162Scf00661g00017' => 'pax', 'Peaxi162Scf00926g00027' => 'pax', 'Peaxi162Scf01064g00263' => 'pax', 'Peaxi162Scf01211g00135' => 'pax', 'PGR004G2336' => 'pgr', 'PGR042G0327' => 'pgr', 'PGR042G1957' => 'pgr', 'PGR042G2003' => 'pgr', 'PGR042G3929' => 'pgr', 'PGR083G1137' => 'pgr', 'PGR083G1364' => 'pgr', 'PGSC0003DMG400003381' => 'stu', 'PGSC0003DMG400003417' => 'stu', 'PGSC0003DMG400008981' => 'stu', 'PGSC0003DMG400012417' => 'stu', 'PGSC0003DMG400012823' => 'stu', 'PGSC0003DMG400016885' => 'stu', 'PGSC0003DMG400022812' => 'stu', 'PGSC0003DMG400029726' => 'stu', 'PGSC0003DMG401009243' => 'stu', 'PGSC0003DMG401031505' => 'stu', 'PGSC0003DMG402031505' => 'stu', 'Phvul.001G017600' => 'pvu', 'Phvul.002G193500' => 'pvu', 'Phvul.002G228900' => 'pvu', 'Phvul.002G236800' => 'pvu', 'Phvul.003G049500' => 'pvu', 'Phvul.005G072000' => 'pvu', 'Phvul.006G164800' => 'pvu', 'Phvul.006G185100' => 'pvu', 'Phvul.007G090000' => 'pvu', 'Potri.001G399800' => 'ptr', 'Potri.002G149900' => 'ptr', 'Potri.004G044100' => 'ptr', 'Potri.004G177600' => 'ptr', 'Potri.009G138000' => 'ptr', 'Potri.010G094000' => 'ptr', 'Potri.011G053000' => 'ptr', 'Potri.011G119300' => 'ptr', 'Potri.013G113700' => 'ptr', 'Potri.018G107800' => 'ptr', 'Potri.019G084100' => 'ptr', 'Pp3c14_23720' => 'ppa', 'Pp3c16_6340' => 'ppa', 'Pp3c23_13420' => 'ppa', 'Pp3c24_2740' => 'ppa', 'Pp3c25_860' => 'ppa', 'Pp3c8_21750' => 'ppa', 'Prupe.1G273000' => 'ppe', 'Prupe.1G273700' => 'ppe', 'Prupe.1G274100' => 'ppe', 'Prupe.2G023300' => 'ppe', 'Prupe.4G048000' => 'ppe', 'Prupe.4G080400' => 'ppe', 'Prupe.4G181200' => 'ppe', 'Prupe.8G056900' => 'ppe', 'Prupe.8G168700' => 'ppe', 'Psat1g189080' => 'psa', 'Psat1g204760' => 'psa', 'Psat4g175560' => 'psa', 'Psat4g177720' => 'psa', 'Psat5g244240' => 'psa', 'Psat6g010720' => 'psa', 'Psat6g187200' => 'psa', 'Psat7g072040' => 'psa', 'PSO017G3501' => 'pso', 'PSO063G2148' => 'pso', 'PSO063G5608' => 'pso', 'PSO210G6392' => 'pso', 'PSO541G2319' => 'pso', 'PSO541G2836' => 'pso', 'PSO541G4012' => 'pso', 'PSO541G6253' => 'pso', 'PSO675G0580' => 'pso', 'PSO675G0856' => 'pso', 'PSO675G5635' => 'pso', 'PSO675G9157' => 'pso', 'PSO832G1660' => 'pso', 'PSO832G1969' => 'pso', 'QL02p007186' => 'qlo', 'QL02p033904' => 'qlo', 'QL03p064391' => 'qlo', 'QL05p040593' => 'qlo', 'QL05p058242' => 'qlo', 'QL08p021825' => 'qlo', 'QL11p004981' => 'qlo', 'RcHm_v2.0_Chr1g0318301' => 'rch', 'RcHm_v2.0_Chr4g0418501' => 'rch', 'RcHm_v2.0_Chr4g0439971' => 'rch', 'RcHm_v2.0_Chr5g0008541' => 'rch', 'RcHm_v2.0_Chr5g0014101' => 'rch', 'RcHm_v2.0_Chr5g0014131' => 'rch', 'RcHm_v2.0_Chr5g0033621' => 'rch', 'RcHm_v2.0_Chr6g0272041' => 'rch', 'RcHm_v2.0_Chr6g0278831' => 'rch', 'Rhsim02G0130400' => 'rsi', 'Rhsim02G0171100' => 'rsi', 'Rhsim05G0053000' => 'rsi', 'Rhsim05G0053100' => 'rsi', 'Rhsim06G0096500' => 'rsi', 'Rhsim06G0096600' => 'rsi', 'Rhsim06G0199100' => 'rsi', 'Rhsim12G0062300' => 'rsi', 'Rhsim12G0062800' => 'rsi', 'Sabra02G0118600' => 'sbr', 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'Solyc03g079860.2' => 'sly', 'Solyc04g079770.3' => 'sly', 'Solyc05g007430.4' => 'sly', 'Solyc07g063150.3' => 'sly', 'Solyc08g016620.3' => 'sly', 'Solyc09g057590.3' => 'sly', 'Solyc09g057600.1' => 'sly', 'Solyc10g009050.3' => 'sly', 'Solyc11g017420.2' => 'sly', 'Sopen01g053810' => 'spe', 'Sopen02g023040' => 'spe', 'Sopen03g002440' => 'spe', 'Sopen04g033350' => 'spe', 'Sopen05g003310' => 'spe', 'Sopen07g004050' => 'spe', 'Sopen07g031340' => 'spe', 'Sopen08g006990' => 'spe', 'Sopen10g004830' => 'spe', 'Sopen11g009370' => 'spe', 'Sp1g24450' => 'spa', 'Sp1g29670' => 'spa', 'Sp1g39600' => 'spa', 'Sp2g11080' => 'spa', 'Sp2g13970' => 'spa', 'Sp4g16130' => 'spa', 'Sp6g13080' => 'spa', 'Sp7g37270' => 'spa', 'TAR371G0065' => 'tar', 'TAR376G0340' => 'tar', 'TAR376G0435' => 'tar', 'TAR381G0002' => 'tar', 'TAR381G1236' => 'tar', 'TAR624G0055' => 'tar', 'TAR624G0324' => 'tar', 'TAR624G0696' => 'tar', 'TAR624G0906' => 'tar', 'TAR625G0107' => 'tar', 'TAR626G0015' => 'tar', 'TAR626G1356' => 'tar', 'TAR627G0888' => 'tar', 'TAR628G0399' => 'tar', 'TAR628G1327' => 'tar', 'TAR629G2831' => 'tar', 'TAR629G2874' => 'tar', 'TAR633G1432' => 'tar', 'TAR633G2771' => 'tar', 'THA.LOC104803394' => 'tha', 'THA.LOC104805153' => 'tha', 'THA.LOC104806784' => 'tha', 'THA.LOC104810473' => 'tha', 'THA.LOC104813100' => 'tha', 'THA.LOC104814215' => 'tha', 'THA.LOC104815554' => 'tha', 'THA.LOC104820544' => 'tha', 'THA.LOC104824754' => 'tha', 'THA.LOC104827717' => 'tha', 'Thecc.02G031400' => 'tca', 'Thecc.02G055900' => 'tca', 'Thecc.02G350800' => 'tca', 'Thecc.06G150900' => 'tca', 'Thecc.06G186600' => 'tca', 'Thecc.07G089600' => 'tca', 'Thecc.08G020400' => 'tca', 'Thecc.08G182100' => 'tca', 'Thhalv10000873m.g' => 'esa', 'Thhalv10004185m.g' => 'esa', 'Thhalv10006981m.g' => 'esa', 'Thhalv10007204m.g' => 'esa', 'Thhalv10011374m.g' => 'esa', 'Thhalv10013482m.g' => 'esa', 'Thhalv10017801m.g' => 'esa', 'Thhalv10024983m.g' => 'esa', 'TPR.G12072' => 'tpr', 'TPR.G15769' => 'tpr', 'TPR.G16504' => 'tpr', 'TPR.G16506' => 'tpr', 'TPR.G24345' => 'tpr', 'TPR.G26666' => 'tpr', 'TPR.G27320' => 'tpr', 'TPR.G31819' => 'tpr', 'TPR.G38879' => 'tpr', 'TPR.G39015' => 'tpr', 'TPR.G8819' => 'tpr', 'TWI09G0924' => 'twi', 'TWI12G0811' => 'twi', 'TWI12G1294' => 'twi', 'TWI31G0150' => 'twi', 'TWI36G1262' => 'twi', 'TWI38G1287' => 'twi', 'TWI38G1633' => 'twi', 'TWI38G1982' => 'twi', 'TWI39G0116' => 'twi', 'TWI60G1011' => 'twi', 'TWI63G0171' => 'twi', 'TWI73G0839' => 'twi', 'TWI79G1511' => 'twi', 'unitig_0.g915' => 'ugi', 'unitig_0.g916' => 'ugi', 'unitig_21.g20219' => 'ugi', 'unitig_21.g20416' => 'ugi', 'unitig_578.g16132' => 'ugi', 'unitig_578.g16718' => 'ugi', 'unitig_62.g23481' => 'ugi', 'unitig_744.g24535' => 'ugi', 'unitig_749.g13525' => 'ugi', 'vmacro01248' => 'vma', 'vmacro02290' => 'vma', 'vmacro10946' => 'vma', 'vmacro11865' => 'vma', 'vmacro12493' => 'vma', 'vmacro17322' => 'vma', 'vmacro21599' => 'vma', 'vmacro23041' => 'vma', 'VMungo0251G0004' => 'vmu', 'VMungo0251G2639' => 'vmu', 'VMungo0251G2967' => 'vmu', 'VMungo0540G0864' => 'vmu', 'VMungo0540G1569' => 'vmu', 'VMungo0647G0317' => 'vmu', 'VMungo0720G1373' => 'vmu', 'VMungo0720G1508' => 'vmu', 'VMungo1080G0485' => 'vmu', 'VMungo1215G3177' => 'vmu', 'Zm00001eb112600' => 'zma', 'Zm00001eb120220' => 'zma', 'Zm00001eb153240' => 'zma', 'Zm00001eb168880' => 'zma', 'Zm00001eb213920' => 'zma', 'Zm00001eb228280' => 'zma', 'Zm00001eb254580' => 'zma', 'Zm00001eb272180' => 'zma', 'Zm00001eb293190' => 'zma', 'Zm00001eb322930' => 'zma', 'Zm00001eb353360' => 'zma', 'Zm00001eb353390' => 'zma', 'Zm00001eb353430' => 'zma', 'Zm00001eb353440' => 'zma', 'Zm00001eb353780' => 'zma' ), 'gf_id' => 'HOM05D000499', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000499' ), 'data_identifier' => 'HOM05D000499', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000499', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1066', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p29780' => 'bna', 'A02p33180' => 'bna', 'A03p16470' => 'bna', 'A03p66010' => 'bna', 'A04p25970' => 'bna', 'A06p01270' => 'bna', 'A06p46080' => 'bna', 'A07p11400' => 'bna', 'A08p01840' => 'bna', 'A08p08230' => 'bna', 'A08p25740' => 'bna', 'A09p32070' => 'bna', 'A09p37830' => 'bna', 'A09p42840' => 'bna', 'A09p42850' => 'bna', 'Aa31LG10G2060' => 'aar', 'Aa31LG2G7410' => 'aar', 'Aa31LG6G10200' => 'aar', 'Aa31LG6G16680' => 'aar', 'Aa31LG6G8470' => 'aar', 'Aa31LG9G12730' => 'aar', 'Aa31LG9G13680' => 'aar', 'Aa31LG9G14920' => 'aar', 'Aa31LG9G6650' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4977' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5467' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3254' => 'aag', 'Actinidia02578' => 'ach', 'Actinidia07693' => 'ach', 'Actinidia08413' => 'ach', 'Actinidia08414' => 'ach', 'Actinidia15289' => 'ach', 'Actinidia19871' => 'ach', 'Actinidia21475' => 'ach', 'Actinidia22576' => 'ach', 'Actinidia28327' => 'ach', 'Actinidia32491' => 'ach', 'Actinidia39463' => 'ach', 'Actinidia39571' => 'ach', 'Ah.01g013750' => 'amhyb', 'Ah.01g023210' => 'amhyb', 'Ah.04g164850' => 'amhyb', 'Ah.05g178060' => 'amhyb', 'Ah.07g204270' => 'amhyb', 'Ah.07g208480' => 'amhyb', 'Ah.09g237410' => 'amhyb', 'Ah.14g089460' => 'amhyb', 'AL1G41790' => 'aly', 'AL1G49050' => 'aly', 'AL1G53810' => 'aly', 'AL1G61400' => 'aly', 'AL4G18580' => 'aly', 'AL5G12510' => 'aly', 'AL5G12540' => 'aly', 'AL6G43230' => 'aly', 'AL7G10370' => 'aly', 'AL7G19250' => 'aly', 'AL8G12240' => 'aly', 'AL8G18540' => 'aly', 'Aqoxy1G02409' => 'aox', 'Aqoxy2G03993' => 'aox', 'Aqoxy3G03357' => 'aox', 'Aqoxy4G00785' => 'aox', 'Aqoxy5G02598' => 'aox', 'Aqoxy6G00132' => 'aox', 'Aqoxy7G01776' => 'aox', 'Aqoxy7G02316' => 'aox', 'Aqoxy7G03973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.12AFKW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B8730' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27IQR1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3F75VG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3RE0GA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41TCQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.527VTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FIR39' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5W8UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DA38EV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ63HS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H1I32C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HC27T5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4M8AP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7N3CZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9UVDZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LS1NQA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT1D4B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SKC4TM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCFV76' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF9Q1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQWD9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1ZM88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WE07RT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YCK7VH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJE6Q6' => 'arhy', 'AT1G28240' => 'ath', 'AT1G34550' => 'ath', 'AT1G53040' => 'ath', 'AT2G02910' => 'ath', 'AT4G09630' => 'ath', 'AT4G38500' => 'ath', 'AT5G42660' => 'ath', 'AT5G46220' => 'ath', 'ATR0152G026' => 'atr', 'ATR0564G343' => 'atr', 'ATR0706G151' => 'atr', 'ATR0733G207' => 'atr', 'ATR0751G234' => 'atr', 'ATR0807G048' => 'atr', 'ATR1091G084' => 'atr', 'Atru.chr10.1229' => 'acertr', 'Atru.chr10.1230' => 'acertr', 'Atru.chr10.1874' => 'acertr', 'Atru.chr11.1808' => 'acertr', 'Atru.chr13.1795' => 'acertr', 'Atru.chr13.570' => 'acertr', 'Atru.chr2.2608' => 'acertr', 'Atru.chr2.2609' => 'acertr', 'Atru.chr5.3428' => 'acertr', 'Atru.chr8.1171' => 'acertr', 'AUR62004651' => 'cqu', 'AUR62008675' => 'cqu', 'AUR62010014' => 'cqu', 'AUR62013004' => 'cqu', 'AUR62014825' => 'cqu', 'AUR62015015' => 'cqu', 'AUR62015151' => 'cqu', 'AUR62017020' => 'cqu', 'AUR62019422' => 'cqu', 'AUR62023570' => 'cqu', 'AUR62025571' => 'cqu', 'AUR62029098' => 'cqu', 'AUR62033863' => 'cqu', 'AUR62034296' => 'cqu', 'AUR62040075' => 'cqu', 'BcaB02g07334' => 'bca', 'BcaB02g10575' => 'bca', 'BcaB03g12119' => 'bca', 'BcaB03g12120' => 'bca', 'BcaB03g13945' => 'bca', 'BcaB04g17123' => 'bca', 'BcaB04g17867' => 'bca', 'BcaB04g19839' => 'bca', 'BcaB07g30317' => 'bca', 'BcaB07g32432' => 'bca', 'BcaB07g33362' => 'bca', 'BcaB08g36611' => 'bca', 'BcaC01g00028' => 'bca', 'BcaC01g01356' => 'bca', 'BcaC01g02034' => 'bca', 'BcaC01g06051' => 'bca', 'BcaC03g16839' => 'bca', 'BcaC03g17176' => 'bca', 'BcaC05g26829' => 'bca', 'BcaC06g31490' => 'bca', 'BcaC06g35344' => 'bca', 'BcaC06g36570' => 'bca', 'BcaC07g37537' => 'bca', 'BcaC08g43491' => 'bca', 'BcaC08g43773' => 'bca', 'BcaNung00234' => 'bca', 'BcaNung01982' => 'bca', 'BcaNung03707' => 'bca', 'BcaNung06454' => 'bca', 'BolC2t10762H' => 'bol', 'BolC2t11191H' => 'bol', 'BolC3t14322H' => 'bol', 'BolC3t19747H' => 'bol', 'BolC3t21425H' => 'bol', 'BolC4t27800H' => 'bol', 'BolC5t31423H' => 'bol', 'BolC6t35951H' => 'bol', 'BolC6t36282H' => 'bol', 'BolC7t40678H' => 'bol', 'BolC7t40679H' => 'bol', 'BolC7t42222H' => 'bol', 'BolC7t43492H' => 'bol', 'BolC7t46785H' => 'bol', 'BolC8t47853H' => 'bol', 'BolC9t56805H' => 'bol', 'BraA02t08000Z' => 'bra', 'BraA02t08341Z' => 'bra', 'BraA03t10936Z' => 'bra', 'BraA03t15657Z' => 'bra', 'BraA04t18100Z' => 'bra', 'BraA05t20523Z' => 'bra', 'BraA06t23353Z' => 'bra', 'BraA06t27473Z' => 'bra', 'BraA06t27769Z' => 'bra', 'BraA07t28928Z' => 'bra', 'BraA08t32236Z' => 'bra', 'BraA08t32841Z' => 'bra', 'BraA08t34524Z' => 'bra', 'BraA09t38742Z' => 'bra', 'BraA09t39295Z' => 'bra', 'C02p47180' => 'bna', 'C02p50990' => 'bna', 'C03p19360' => 'bna', 'C03p74950' => 'bna', 'C03p91000' => 'bna', 'C04p63260' => 'bna', 'C05p27050' => 'bna', 'C06p08750' => 'bna', 'C06p11490' => 'bna', 'C07p02820' => 'bna', 'C07p17180' => 'bna', 'C07p29440' => 'bna', 'C07p63730' => 'bna', 'C09p39260' => 'bna', 'CAN.G1164.34' => 'can', 'CAN.G1164.39' => 'can', 'CAN.G1530.3' => 'can', 'CAN.G162.61' => 'can', 'CAN.G176.6' => 'can', 'CAN.G289.49' => 'can', 'CAN.G370.21' => 'can', 'CAN.G370.22' => 'can', 'CAN.G371.117' => 'can', 'CAN.G58.37' => 'can', 'CAN.G588.98' => 'can', 'CANSAT21G2266' => 'cansat', 'CANSAT25G2799' => 'cansat', 'CANSAT35G0862' => 'cansat', 'CANSAT35G1704' => 'cansat', 'CANSAT35G1760' => 'cansat', 'CANSAT56G3971' => 'cansat', 'CANSAT56G4116' => 'cansat', 'CANSAT80G1259' => 'cansat', 'CARHR027730' => 'chi', 'CARHR033880' => 'chi', 'CARHR043270' => 'chi', 'CARHR145330' => 'chi', 'CARHR145340' => 'chi', 'CARHR175570' => 'chi', 'CARHR181570' => 'chi', 'CARHR258470' => 'chi', 'CARHR260490' => 'chi', 'CARHR294220' => 'chi', 'Carub.0001s2668' => 'cru', 'Carub.0001s3257' => 'cru', 'Carub.0001s4220' => 'cru', 'Carub.0005s0179' => 'cru', 'Carub.0006s2807' => 'cru', 'Carub.0007s0039' => 'cru', 'Carub.0008s0169' => 'cru', 'Carub.0008s0636' => 'cru', 'Ca_00338_v3' => 'car', 'Ca_00542_v3' => 'car', 'Ca_01844_v3' => 'car', 'Ca_10611_v3' => 'car', 'Ca_13326_v3' => 'car', 'Ca_17944_v3' => 'car', 'Ca_18546_v3' => 'car', 'Ca_24219_v3' => 'car', 'Ca_29972_v3' => 'car', 'CBR_g3681' => 'cbr', 'CBR_g40021' => 'cbr', 'Cc01_g08140' => 'ccan', 'Cc02_g13410' => 'ccan', 'Cc02_g37480' => 'ccan', 'Cc05_g12030' => 'ccan', 'Cc09_g03370' => 'ccan', 'Cc09_g10300' => 'ccan', 'Cc10_g03530' => 'ccan', 'Cc10_g11380' => 'ccan', 'CDE01G0176' => 'cde', 'CDE02G0675' => 'cde', 'CDE02G0942' => 'cde', 'CDE02G1153' => 'cde', 'CDE02G4177' => 'cde', 'CDE04G2117' => 'cde', 'CDE04G2736' => 'cde', 'CDE08G1161' => 'cde', 'CDE09G1238' => 'cde', 'Cfa000467' => 'cfa', 'Cfa000947' => 'cfa', 'Cfa004969' => 'cfa', 'Cfa005284' => 'cfa', 'Cfa008993' => 'cfa', 'Cfa018187' => 'cfa', 'Cfa018454' => 'cfa', 'Cfa020585' => 'cfa', 'Ciclev10000424m.g' => 'ccl', 'Ciclev10003605m.g' => 'ccl', 'Ciclev10007828m.g' => 'ccl', 'Ciclev10014620m.g' => 'ccl', 'Ciclev10015169m.g' => 'ccl', 'Ciclev10018291m.g' => 'ccl', 'Ciclev10028256m.g' => 'ccl', 'Ciclev10033822m.g' => 'ccl', 'CiPaw.05G060300' => 'cil', 'CiPaw.05G085000' => 'cil', 'CiPaw.06G083700' => 'cil', 'CiPaw.06G120300' => 'cil', 'CiPaw.09G060500' => 'cil', 'CiPaw.09G123800' => 'cil', 'CiPaw.11G169700' => 'cil', 'CiPaw.12G118300' => 'cil', 'CiPaw.15G071000' => 'cil', 'CiPaw.15G081900' => 'cil', 'ClCG01G024610' => 'cla', 'ClCG03G006070' => 'cla', 'ClCG05G019250' => 'cla', 'ClCG09G009500' => 'cla', 'ClCG11G008200' => 'cla', 'ClCG11G018080' => 'cla', 'COL.COLO4_17373' => 'col', 'COL.COLO4_22994' => 'col', 'COL.COLO4_26389' => 'col', 'COL.COLO4_27170' => 'col', 'COL.COLO4_31074' => 'col', 'COL.COLO4_31465' => 'col', 'COL.COLO4_36438' => 'col', 'COL.COLO4_36439' => 'col', 'Cpa.g.c38781' => 'cpa', 'Cpa.g.sc128.12' => 'cpa', 'Cpa.g.sc166.7' => 'cpa', 'Cpa.g.sc166.8' => 'cpa', 'Cpa.g.sc20.111' => 'cpa', 'Cpa.g.sc27.31' => 'cpa', 'Cpa.g.sc64.36' => 'cpa', 'Cpa.g.sc64.37' => 'cpa', 'Cpa.g.sc66.49' => 'cpa', 'Cpa.g.sc80.64' => 'cpa', 'CsaV3_1G012320' => 'csa', 'CsaV3_2G008480' => 'csa', 'CsaV3_2G033450' => 'csa', 'CsaV3_3G044830' => 'csa', 'CsaV3_4G033710' => 'csa', 'CsaV3_6G051730' => 'csa', 'CsaV3_7G025350' => 'csa', 'CSS0001067' => 'camsi', 'CSS0005996' => 'camsi', 'CSS0006590' => 'camsi', 'CSS0009673' => 'camsi', 'CSS0010201' => 'camsi', 'CSS0010549' => 'camsi', 'CSS0011364' => 'camsi', 'CSS0014473' => 'camsi', 'CSS0014961' => 'camsi', 'CSS0020191' => 'camsi', 'CSS0021165' => 'camsi', 'CSS0022306' => 'camsi', 'CSS0030591' => 'camsi', 'CSS0030696' => 'camsi', 'CSS0032653' => 'camsi', 'CSS0037487' => 'camsi', 'CSS0041102' => 'camsi', 'CSS0041261' => 'camsi', 'CSS0046246' => 'camsi', 'CSS0049256' => 'camsi', 'DCAR_004075' => 'dca', 'DCAR_011538' => 'dca', 'DCAR_019553' => 'dca', 'DCAR_020952' => 'dca', 'DCAR_021739' => 'dca', 'DCAR_027407' => 'dca', 'DCAR_027913' => 'dca', 'DCAR_028066' => 'dca', 'Dinv05899' => 'din', 'Dinv07563' => 'din', 'Dinv08010' => 'din', 'Dinv14125' => 'din', 'Dinv20172' => 'din', 'Dinv30743' => 'din', 'Dinv31229' => 'din', 'Dinv34162' => 'din', 'Dinv36028' => 'din', 'Dinv39368' => 'din', 'Dinv40565' => 'din', 'Dinv41706' => 'din', 'Duzib052G0089' => 'dzi', 'Duzib116G0641' => 'dzi', 'Duzib132G0069' => 'dzi', 'Duzib132G1219' => 'dzi', 'Duzib147G0278' => 'dzi', 'Duzib160G0480' => 'dzi', 'Duzib170G0661' => 'dzi', 'Duzib177G0591' => 'dzi', 'Duzib187G1353' => 'dzi', 'Duzib192G0858' => 'dzi', 'Duzib192G0883' => 'dzi', 'Duzib213G0506' => 'dzi', 'Duzib235G0289' => 'dzi', 'Duzib251G0422' => 'dzi', 'ECA232G3898' => 'eca', 'ECA233G5950' => 'eca', 'ECA234G1699' => 'eca', 'ECA234G2421' => 'eca', 'ECA236G0426' => 'eca', 'ECA236G4331' => 'eca', 'ECA248G2573' => 'eca', 'EL10Ac1g00077' => 'bvu', 'EL10Ac1g01746' => 'bvu', 'EL10Ac2g03464' => 'bvu', 'EL10Ac4g08176' => 'bvu', 'EL10Ac7g17521' => 'bvu', 'EL10Ac8g20386' => 'bvu', 'EL10Ac9g21343' => 'bvu', 'EL10Ac9g22688' => 'bvu', 'Eucgr.B03434' => 'egr', 'Eucgr.D00618' => 'egr', 'Eucgr.E02395' => 'egr', 'Eucgr.F01129' => 'egr', 'Eucgr.F02622' => 'egr', 'Eucgr.F04207' => 'egr', 'FAN01G0570' => 'fan', 'FAN03G3351' => 'fan', 'FAN06G3702' => 'fan', 'FAN07G2149' => 'fan', 'FAN10G3758' => 'fan', 'FAN11G1170' => 'fan', 'FAN11G2050' => 'fan', 'FAN11G2724' => 'fan', 'FAN12G1700' => 'fan', 'FAN12G2028' => 'fan', 'FAN15G1160' => 'fan', 'FAN15G3063' => 'fan', 'FAN16G2540' => 'fan', 'FAN16G3077' => 'fan', 'FAN16G3624' => 'fan', 'FAN17G0221' => 'fan', 'FAN20G2492' => 'fan', 'FAN20G2905' => 'fan', 'FAN21G0548' => 'fan', 'FAN21G1300' => 'fan', 'FAN22G0077' => 'fan', 'FAN22G1315' => 'fan', 'FAN24G1280' => 'fan', 'FAN24G1445' => 'fan', 'FAN24G3527' => 'fan', 'FAN25G0464' => 'fan', 'FAN25G2885' => 'fan', 'FAN25G3270' => 'fan', 'FAN27G1101' => 'fan', 'FAN27G2846' => 'fan', 'FAN27G3524' => 'fan', 'FvH4_2g11770' => 'fve', 'FvH4_2g15630' => 'fve', 'FvH4_3g05570' => 'fve', 'FvH4_3g09110' => 'fve', 'FvH4_3g19940' => 'fve', 'FvH4_4g04821' => 'fve', 'FvH4_4g31480' => 'fve', 'FvH4_7g01740' => 'fve', 'Glyma.05G130400' => 'gma', 'Glyma.05G156400' => 'gma', 'Glyma.07G197000' => 'gma', 'Glyma.08G085151' => 'gma', 'Glyma.08G114500' => 'gma', 'Glyma.08G300400' => 'gma', 'Glyma.10G215800' => 'gma', 'Glyma.12G224400' => 'gma', 'Glyma.13G179300' => 'gma', 'Glyma.13G218151' => 'gma', 'Glyma.13G238800' => 'gma', 'Glyma.13G276900' => 'gma', 'Glyma.14G078200' => 'gma', 'Glyma.15G074500' => 'gma', 'Glyma.15G094100' => 'gma', 'Glyma.17G247200' => 'gma', 'Glyma.18G120100' => 'gma', 'Glyma.20G176000' => 'gma', 'Gohir.A01G063600' => 'ghi', 'Gohir.A01G170301' => 'ghi', 'Gohir.A02G060500' => 'ghi', 'Gohir.A05G133850' => 'ghi', 'Gohir.A05G161400' => 'ghi', 'Gohir.A06G012900' => 'ghi', 'Gohir.A06G035901' => 'ghi', 'Gohir.A06G127100' => 'ghi', 'Gohir.A06G210500' => 'ghi', 'Gohir.A08G008650' => 'ghi', 'Gohir.A09G072700' => 'ghi', 'Gohir.A09G088301' => 'ghi', 'Gohir.A10G040600' => 'ghi', 'Gohir.A12G036300' => 'ghi', 'Gohir.A12G143350' => 'ghi', 'Gohir.A12G165500' => 'ghi', 'Gohir.A13G145700' => 'ghi', 'Gohir.D01G050000' => 'ghi', 'Gohir.D01G051366' => 'ghi', 'Gohir.D01G161350' => 'ghi', 'Gohir.D02G065900' => 'ghi', 'Gohir.D05G164200' => 'ghi', 'Gohir.D05G355500' => 'ghi', 'Gohir.D06G010400' => 'ghi', 'Gohir.D06G111250' => 'ghi', 'Gohir.D06G132000' => 'ghi', 'Gohir.D06G210500' => 'ghi', 'Gohir.D07G165675' => 'ghi', 'Gohir.D08G062240' => 'ghi', 'Gohir.D08G086101' => 'ghi', 'Gohir.D08G138060' => 'ghi', 'Gohir.D09G072300' => 'ghi', 'Gohir.D10G041400' => 'ghi', 'Gohir.D11G191020' => 'ghi', 'Gohir.D11G212066' => 'ghi', 'Gohir.D12G036300' => 'ghi', 'Gohir.D12G168600' => 'ghi', 'Gohir.D13G150600' => 'ghi', 'Gorai.001G057300' => 'gra', 'Gorai.002G069900' => 'gra', 'Gorai.002G200000' => 'gra', 'Gorai.003G067600' => 'gra', 'Gorai.005G074800' => 'gra', 'Gorai.006G087300' => 'gra', 'Gorai.008G037500' => 'gra', 'Gorai.008G181400' => 'gra', 'Gorai.009G169400' => 'gra', 'Gorai.009G387900' => 'gra', 'Gorai.010G013300' => 'gra', 'Gorai.010G153800' => 'gra', 'Gorai.010G255800' => 'gra', 'Gorai.011G043700' => 'gra', 'Gorai.011G198900' => 'gra', 'Gorai.013G168400' => 'gra', 'GSVIVG01005212001' => 'vvi', 'GSVIVG01006163001' => 'vvi', 'GSVIVG01009625001' => 'vvi', 'GSVIVG01014338001' => 'vvi', 'GSVIVG01020005001' => 'vvi', 'GSVIVG01021450001' => 'vvi', 'GSVIVG01023975001' => 'vvi', 'GSVIVG01034490001' => 'vvi', 'HanXRQChr04g0112071' => 'han', 'HanXRQChr05g0131151' => 'han', 'HanXRQChr09g0262371' => 'han', 'HanXRQChr09g0268401' => 'han', 'HanXRQChr10g0279241' => 'han', 'HanXRQChr10g0297961' => 'han', 'HanXRQChr11g0326231' => 'han', 'HanXRQChr11g0328471' => 'han', 'HanXRQChr16g0507941' => 'han', 'HanXRQChr17g0560211' => 'han', 'Haze_02108' => 'cav', 'Haze_02428' => 'cav', 'Haze_05593' => 'cav', 'Haze_06448' => 'cav', 'Haze_09427' => 'cav', 'Haze_12022' => 'cav', 'Haze_17612' => 'cav', 'Haze_17928' => 'cav', 'Hma1.2p1_0032F.1_g019250' => 'hma', 'Hma1.2p1_0163F.1_g072690' => 'hma', 'Hma1.2p1_0265F.1_g106710' => 'hma', 'Hma1.2p1_0286F.1_g113970' => 'hma', 'Hma1.2p1_0363F.1_g136640' => 'hma', 'Hma1.2p1_0584F.1_g183470' => 'hma', 'Hma1.2p1_0885F.1_g232570' => 'hma', 'HPP92_006022' => 'vpl', 'HPP92_007320' => 'vpl', 'HPP92_011521' => 'vpl', 'HPP92_019387' => 'vpl', 'HPP92_024038' => 'vpl', 'Hund05891' => 'sun', 'Hund06450' => 'sun', 'Hund12053' => 'sun', 'Hund16800' => 'sun', 'Hund21222' => 'sun', 'Hund22896' => 'sun', 'Hund23746' => 'sun', 'Hund27083' => 'sun', 'Lalb_Chr02g0141831' => 'lal', 'Lalb_Chr02g0141841' => 'lal', 'Lalb_Chr05g0220411' => 'lal', 'Lalb_Chr06g0162081' => 'lal', 'Lalb_Chr09g0327651' => 'lal', 'Lalb_Chr13g0295051' => 'lal', 'Lalb_Chr15g0086801' => 'lal', 'Lalb_Chr16g0383781' => 'lal', 'Lalb_Chr16g0383791' => 'lal', 'Lalb_Chr18g0055441' => 'lal', 'Lalb_Chr18g0059611' => 'lal', 'Lalb_Chr20g0109661' => 'lal', 'Lalb_Chr20g0109831' => 'lal', 'Lalb_Chr20g0121871' => 'lal', 'Lalb_Chr22g0355361' => 'lal', 'Lalb_Chr25g0286371' => 'lal', 'Lj1A1187G43' => 'lonja', 'Lj1A1205T50' => 'lonja', 'Lj1A800G33' => 'lonja', 'Lj1C1187T7' => 'lonja', 'Lj1C843T11' => 'lonja', 'Lj1g0010940' => 'lja', 'Lj2A288T69' => 'lonja', 'Lj3g0024276' => 'lja', 'Lj4A47T76' => 'lonja', 'Lj4g0005805' => 'lja', 'Lj4g0006097' => 'lja', 'Lj4g0008528' => 'lja', 'Lj4g0024907' => 'lja', 'Lj5g0012472' => 'lja', 'Lj5g0018648' => 'lja', 'Lj6C789G1' => 'lonja', 'Lj6g0004000' => 'lja', 'Lj7A292G67' => 'lonja', 'Lj7A292T64' => 'lonja', 'Lj9A400T58' => 'lonja', 'Lsat_1_v5_gn_1_126181' => 'lsa', 'Lsat_1_v5_gn_4_123041' => 'lsa', 'Lsat_1_v5_gn_4_133620' => 'lsa', 'Lsat_1_v5_gn_4_53221' => 'lsa', 'Lsat_1_v5_gn_4_71961' => 'lsa', 'Lsat_1_v5_gn_7_105241' => 'lsa', 'Lsat_1_v5_gn_7_21361' => 'lsa', 'Lsat_1_v5_gn_7_28860' => 'lsa', 'Lsat_1_v5_gn_7_31260' => 'lsa', 'Lsat_1_v5_gn_8_52801' => 'lsa', 'Manes.02G191400' => 'mes', 'Manes.03G110100' => 'mes', 'Manes.04G071100' => 'mes', 'Manes.05G100500' => 'mes', 'Manes.05G164700' => 'mes', 'Manes.15G087000' => 'mes', 'Manes.15G121500' => 'mes', 'Manes.16G028300' => 'mes', 'Manes.17G046100' => 'mes', 'Manes.17G069800' => 'mes', 'Manes.18G100500' => 'mes', 'Mapoly0002s0109' => 'mpo', 'Mapoly0024s0007' => 'mpo', 'Mapoly0089s0032' => 'mpo', 'MBI04_g42241_MAGBIO' => 'mbi', 'MBI05_g11988_MAGBIO' => 'mbi', 'MBI05_g35452_MAGBIO' => 'mbi', 'MBI07_g30179_MAGBIO' => 'mbi', 'MBI07_g35859_MAGBIO' => 'mbi', 'MBI07_g35860_MAGBIO' => 'mbi', 'MBI07_g37166_MAGBIO' => 'mbi', 'MBI08_g18172_MAGBIO' => 'mbi', 'MBI09_g08441_MAGBIO' => 'mbi', 'MBI13_g01676_MAGBIO' => 'mbi', 'MBI14_g42955_MAGBIO' => 'mbi', 'MBI16_g13161_MAGBIO' => 'mbi', 'MBI17_g27204_MAGBIO' => 'mbi', 'MBI19_g21595_MAGBIO' => 'mbi', 'MD00G1148400' => 'mdo', 'MD02G1301200' => 'mdo', 'MD03G1227800' => 'mdo', 'MD05G1041100' => 'mdo', 'MD05G1124800' => 'mdo', 'MD05G1284000' => 'mdo', 'MD05G1338800' => 'mdo', 'MD05G1338900' => 'mdo', 'MD07G1022800' => 'mdo', 'MD10G1047500' => 'mdo', 'MD10G1127500' => 'mdo', 'MD10G1262300' => 'mdo', 'MD10G1293800' => 'mdo', 'MD16G1074300' => 'mdo', 'Medtr1g021670' => 'mtr', 'Medtr1g096320' => 'mtr', 'Medtr2g013690' => 'mtr', 'Medtr2g019450' => 'mtr', 'Medtr2g085170' => 'mtr', 'Medtr4g088785' => 'mtr', 'Medtr8g055930' => 'mtr', 'Medtr8g085850' => 'mtr', 'MELO3C002605.2' => 'cme', 'MELO3C003891.2' => 'cme', 'MELO3C004012.2' => 'cme', 'MELO3C007134.2' => 'cme', 'MELO3C008118.2' => 'cme', 'MELO3C016700.2' => 'cme', 'MELO3C024127.2' => 'cme', 'MELO3C033361.2' => 'cme', 'MELO3C033362.2' => 'cme', 'Migut.C00430' => 'egut', 'Migut.C01246' => 'egut', 'Migut.E00101' => 'egut', 'Migut.H01486' => 'egut', 'Migut.H01939' => 'egut', 'Migut.K00360' => 'egut', 'Migut.M00910' => 'egut', 'Migut.M01139' => 'egut', 'Migut.N02677' => 'egut', 'MSTRG.13252' => 'ama', 'MSTRG.14701' => 'ama', 'MSTRG.1521' => 'ama', 'MSTRG.15884' => 'ama', 'MSTRG.16242' => 'ama', 'MSTRG.22285' => 'ama', 'MSTRG.22444' => 'ama', 'MSTRG.2349' => 'ama', 'MSTRG.26308' => 'ama', 'MSTRG.28296' => 'ama', 'MSTRG.9895' => 'ama', 'Nitab4.5_0000110g0060' => 'nta', 'Nitab4.5_0000420g0130' => 'nta', 'Nitab4.5_0000422g0030' => 'nta', 'Nitab4.5_0000560g0180' => 'nta', 'Nitab4.5_0000703g0100' => 'nta', 'Nitab4.5_0000786g0200' => 'nta', 'Nitab4.5_0001336g0020' => 'nta', 'Nitab4.5_0001796g0030' => 'nta', 'Nitab4.5_0003348g0060' => 'nta', 'Nitab4.5_0003698g0040' => 'nta', 'Nitab4.5_0003942g0090' => 'nta', 'Nitab4.5_0004775g0070' => 'nta', 'Nitab4.5_0004864g0030' => 'nta', 'Nitab4.5_0005615g0020' => 'nta', 'Nitab4.5_0009288g0030' => 'nta', 'Nitab4.5_0009341g0010' => 'nta', 'Nitab4.5_0009535g0010' => 'nta', 'Nn1g03995' => 'nnu', 'Nn1g04100' => 'nnu', 'Nn1g06530' => 'nnu', 'Nn3g16404' => 'nnu', 'Nn3g17212' => 'nnu', 'Nn3g20776' => 'nnu', 'Nn3g21923' => 'nnu', 'Nn5g27737' => 'nnu', 'Nn5g29461' => 'nnu', 'Nn7g38355' => 'nnu', 'Nn8g39873' => 'nnu', 'Oeu000548.2' => 'oeu', 'Oeu004672.1' => 'oeu', 'Oeu015605.2' => 'oeu', 'Oeu016092.1' => 'oeu', 'Oeu017879.3' => 'oeu', 'Oeu024910.1' => 'oeu', 'Oeu028965.1' => 'oeu', 'Oeu031269.1' => 'oeu', 'Oeu031270.1' => 'oeu', 'Oeu032535.1' => 'oeu', 'Oeu034151.1' => 'oeu', 'Oeu034152.1' => 'oeu', 'Oeu034588.2' => 'oeu', 'Oeu050846.1' => 'oeu', 'Oeu050849.2' => 'oeu', 'Oeu051063.2' => 'oeu', 'Oeu052368.1' => 'oeu', 'Oeu052370.1' => 'oeu', 'Os01g0210400' => 'osa', 'Os01g0304300' => 'osa', 'Os01g0749100' => 'osa', 'Os02g0745800' => 'osa', 'Os03g0769050' => 'osa', 'Os05g0531500' => 'osa', 'Os06g0724300' => 'osa', 'Os11g0198100' => 'osa', 'Peaxi162Scf00069g01425' => 'pax', 'Peaxi162Scf00280g00811' => 'pax', 'Peaxi162Scf00310g00615' => 'pax', 'Peaxi162Scf00362g00542' => 'pax', 'Peaxi162Scf00461g00310' => 'pax', 'Peaxi162Scf00530g00118' => 'pax', 'Peaxi162Scf00541g00057' => 'pax', 'Peaxi162Scf00661g00017' => 'pax', 'Peaxi162Scf00926g00027' => 'pax', 'Peaxi162Scf01064g00263' => 'pax', 'Peaxi162Scf01211g00135' => 'pax', 'PGR004G2336' => 'pgr', 'PGR042G0327' => 'pgr', 'PGR042G1957' => 'pgr', 'PGR042G2003' => 'pgr', 'PGR042G3929' => 'pgr', 'PGR083G1137' => 'pgr', 'PGR083G1364' => 'pgr', 'PGSC0003DMG400003381' => 'stu', 'PGSC0003DMG400003417' => 'stu', 'PGSC0003DMG400008981' => 'stu', 'PGSC0003DMG400012417' => 'stu', 'PGSC0003DMG400012823' => 'stu', 'PGSC0003DMG400016885' => 'stu', 'PGSC0003DMG400022812' => 'stu', 'PGSC0003DMG400029726' => 'stu', 'PGSC0003DMG401009243' => 'stu', 'PGSC0003DMG401031505' => 'stu', 'PGSC0003DMG402031505' => 'stu', 'Phvul.001G017600' => 'pvu', 'Phvul.002G193500' => 'pvu', 'Phvul.002G228900' => 'pvu', 'Phvul.002G236800' => 'pvu', 'Phvul.003G049500' => 'pvu', 'Phvul.005G072000' => 'pvu', 'Phvul.006G164800' => 'pvu', 'Phvul.006G185100' => 'pvu', 'Phvul.007G090000' => 'pvu', 'Potri.001G399800' => 'ptr', 'Potri.002G149900' => 'ptr', 'Potri.004G044100' => 'ptr', 'Potri.004G177600' => 'ptr', 'Potri.009G138000' => 'ptr', 'Potri.010G094000' => 'ptr', 'Potri.011G053000' => 'ptr', 'Potri.011G119300' => 'ptr', 'Potri.013G113700' => 'ptr', 'Potri.018G107800' => 'ptr', 'Potri.019G084100' => 'ptr', 'Pp3c14_23720' => 'ppa', 'Pp3c16_6340' => 'ppa', 'Pp3c23_13420' => 'ppa', 'Pp3c24_2740' => 'ppa', 'Pp3c25_860' => 'ppa', 'Pp3c8_21750' => 'ppa', 'Prupe.1G273000' => 'ppe', 'Prupe.1G273700' => 'ppe', 'Prupe.1G274100' => 'ppe', 'Prupe.2G023300' => 'ppe', 'Prupe.4G048000' => 'ppe', 'Prupe.4G080400' => 'ppe', 'Prupe.4G181200' => 'ppe', 'Prupe.8G056900' => 'ppe', 'Prupe.8G168700' => 'ppe', 'Psat1g189080' => 'psa', 'Psat1g204760' => 'psa', 'Psat4g175560' => 'psa', 'Psat4g177720' => 'psa', 'Psat5g244240' => 'psa', 'Psat6g010720' => 'psa', 'Psat6g187200' => 'psa', 'Psat7g072040' => 'psa', 'PSO017G3501' => 'pso', 'PSO063G2148' => 'pso', 'PSO063G5608' => 'pso', 'PSO210G6392' => 'pso', 'PSO541G2319' => 'pso', 'PSO541G2836' => 'pso', 'PSO541G4012' => 'pso', 'PSO541G6253' => 'pso', 'PSO675G0580' => 'pso', 'PSO675G0856' => 'pso', 'PSO675G5635' => 'pso', 'PSO675G9157' => 'pso', 'PSO832G1660' => 'pso', 'PSO832G1969' => 'pso', 'QL02p007186' => 'qlo', 'QL02p033904' => 'qlo', 'QL03p064391' => 'qlo', 'QL05p040593' => 'qlo', 'QL05p058242' => 'qlo', 'QL08p021825' => 'qlo', 'QL11p004981' => 'qlo', 'RcHm_v2.0_Chr1g0318301' => 'rch', 'RcHm_v2.0_Chr4g0418501' => 'rch', 'RcHm_v2.0_Chr4g0439971' => 'rch', 'RcHm_v2.0_Chr5g0008541' => 'rch', 'RcHm_v2.0_Chr5g0014101' => 'rch', 'RcHm_v2.0_Chr5g0014131' => 'rch', 'RcHm_v2.0_Chr5g0033621' => 'rch', 'RcHm_v2.0_Chr6g0272041' => 'rch', 'RcHm_v2.0_Chr6g0278831' => 'rch', 'Rhsim02G0130400' => 'rsi', 'Rhsim02G0171100' => 'rsi', 'Rhsim05G0053000' => 'rsi', 'Rhsim05G0053100' => 'rsi', 'Rhsim06G0096500' => 'rsi', 'Rhsim06G0096600' => 'rsi', 'Rhsim06G0199100' => 'rsi', 'Rhsim12G0062300' => 'rsi', 'Rhsim12G0062800' => 'rsi', 'Sabra02G0118600' => 'sbr', 'Sabra04G0027300' => 'sbr', 'Sabra04G0119500' => 'sbr', 'Sabra08G0112500' => 'sbr', 'Sabra11G0036800' => 'sbr', 'Sabra11G0103800' => 'sbr', 'Sabra13G0096300' => 'sbr', 'Sabra16G0262300' => 'sbr', 'Sabra18G0091700' => 'sbr', 'Sabra19G0095400' => 'sbr', 'SalBow6G3080' => 'sbo', 'SalBow7G1157' => 'sbo', 'SalBow7G2123' => 'sbo', 'SalBow7G2285' => 'sbo', 'SalBow7G3537' => 'sbo', 'SalBow8G2947' => 'sbo', 'SalBow8G4463' => 'sbo', 'SalBow8G5466' => 'sbo', 'Sc01g0001750' => 'sci', 'Sc02g0006640' => 'sci', 'Sc02g0006670' => 'sci', 'Sc04g0008220' => 'sci', 'Sc05g0006190' => 'sci', 'Sc08g0002760' => 'sci', 'Sc17g0006170' => 'sci', 'Sc22g0002050' => 'sci', 'Sc23g0001190' => 'sci', 'Sc24g0000980' => 'sci', 'Sed0006245' => 'sed', 'Sed0007543' => 'sed', 'Sed0009411' => 'sed', 'Sed0010765' => 'sed', 'Sed0012944' => 'sed', 'Sed0014682' => 'sed', 'Sed0016174' => 'sed', 'Sed0016796' => 'sed', 'Sed0020317' => 'sed', 'Sed0021467' => 'sed', 'SEGI_01316' => 'sgi', 'SEGI_03374' => 'sgi', 'SEGI_16265' => 'sgi', 'SEGI_18569' => 'sgi', 'SEGI_20351' => 'sgi', 'SEGI_26395' => 'sgi', 'SEGI_29469' => 'sgi', 'SEGI_34771' => 'sgi', 'SEGI_36769' => 'sgi', 'SEGI_37139' => 'sgi', 'SGA_v2.0_scaffold100G29687' => 'sas', 'SGA_v2.0_scaffold118G32472' => 'sas', 'SGA_v2.0_scaffold14G07051' => 'sas', 'SGA_v2.0_scaffold183G39845' => 'sas', 'SGA_v2.0_scaffold1G00174' => 'sas', 'SGA_v2.0_scaffold22G09714' => 'sas', 'SGA_v2.0_scaffold333G48992' => 'sas', 'SGA_v2.0_scaffold46G17491' => 'sas', 'SGA_v2.0_scaffold49G18294' => 'sas', 'SGA_v2.0_scaffold63G21658' => 'sas', 'SHI01741' => 'shi', 'SHI05771' => 'shi', 'SHI18077' => 'shi', 'SHI20525' => 'shi', 'SHI20527' => 'shi', 'SHI20528' => 'shi', 'SMO172G0185' => 'smo', 'SMO198G0020' => 'smo', 'SMO351G0006' => 'smo', 'SMO356G0118' => 'smo', 'SMO358G0296' => 'smo', 'SMO367G0079' => 'smo', 'SMO367G1277' => 'smo', 'Solyc01g014220.3' => 'sly', 'Solyc01g111770.2' => 'sly', 'Solyc02g078180.3' => 'sly', 'Solyc03g006430.3' => 'sly', 'Solyc03g006456.1' => 'sly', 'Solyc03g079860.2' => 'sly', 'Solyc04g079770.3' => 'sly', 'Solyc05g007430.4' => 'sly', 'Solyc07g063150.3' => 'sly', 'Solyc08g016620.3' => 'sly', 'Solyc09g057590.3' => 'sly', 'Solyc09g057600.1' => 'sly', 'Solyc10g009050.3' => 'sly', 'Solyc11g017420.2' => 'sly', 'Sopen01g053810' => 'spe', 'Sopen02g023040' => 'spe', 'Sopen03g002440' => 'spe', 'Sopen04g033350' => 'spe', 'Sopen05g003310' => 'spe', 'Sopen07g004050' => 'spe', 'Sopen07g031340' => 'spe', 'Sopen08g006990' => 'spe', 'Sopen10g004830' => 'spe', 'Sopen11g009370' => 'spe', 'Sp1g24450' => 'spa', 'Sp1g29670' => 'spa', 'Sp1g39600' => 'spa', 'Sp2g11080' => 'spa', 'Sp2g13970' => 'spa', 'Sp4g16130' => 'spa', 'Sp6g13080' => 'spa', 'Sp7g37270' => 'spa', 'TAR371G0065' => 'tar', 'TAR376G0340' => 'tar', 'TAR376G0435' => 'tar', 'TAR381G0002' => 'tar', 'TAR381G1236' => 'tar', 'TAR624G0055' => 'tar', 'TAR624G0324' => 'tar', 'TAR624G0696' => 'tar', 'TAR624G0906' => 'tar', 'TAR625G0107' => 'tar', 'TAR626G0015' => 'tar', 'TAR626G1356' => 'tar', 'TAR627G0888' => 'tar', 'TAR628G0399' => 'tar', 'TAR628G1327' => 'tar', 'TAR629G2831' => 'tar', 'TAR629G2874' => 'tar', 'TAR633G1432' => 'tar', 'TAR633G2771' => 'tar', 'THA.LOC104803394' => 'tha', 'THA.LOC104805153' => 'tha', 'THA.LOC104806784' => 'tha', 'THA.LOC104810473' => 'tha', 'THA.LOC104813100' => 'tha', 'THA.LOC104814215' => 'tha', 'THA.LOC104815554' => 'tha', 'THA.LOC104820544' => 'tha', 'THA.LOC104824754' => 'tha', 'THA.LOC104827717' => 'tha', 'Thecc.02G031400' => 'tca', 'Thecc.02G055900' => 'tca', 'Thecc.02G350800' => 'tca', 'Thecc.06G150900' => 'tca', 'Thecc.06G186600' => 'tca', 'Thecc.07G089600' => 'tca', 'Thecc.08G020400' => 'tca', 'Thecc.08G182100' => 'tca', 'Thhalv10000873m.g' => 'esa', 'Thhalv10004185m.g' => 'esa', 'Thhalv10006981m.g' => 'esa', 'Thhalv10007204m.g' => 'esa', 'Thhalv10011374m.g' => 'esa', 'Thhalv10013482m.g' => 'esa', 'Thhalv10017801m.g' => 'esa', 'Thhalv10024983m.g' => 'esa', 'TPR.G12072' => 'tpr', 'TPR.G15769' => 'tpr', 'TPR.G16504' => 'tpr', 'TPR.G16506' => 'tpr', 'TPR.G24345' => 'tpr', 'TPR.G26666' => 'tpr', 'TPR.G27320' => 'tpr', 'TPR.G31819' => 'tpr', 'TPR.G38879' => 'tpr', 'TPR.G39015' => 'tpr', 'TPR.G8819' => 'tpr', 'TWI09G0924' => 'twi', 'TWI12G0811' => 'twi', 'TWI12G1294' => 'twi', 'TWI31G0150' => 'twi', 'TWI36G1262' => 'twi', 'TWI38G1287' => 'twi', 'TWI38G1633' => 'twi', 'TWI38G1982' => 'twi', 'TWI39G0116' => 'twi', 'TWI60G1011' => 'twi', 'TWI63G0171' => 'twi', 'TWI73G0839' => 'twi', 'TWI79G1511' => 'twi', 'unitig_0.g915' => 'ugi', 'unitig_0.g916' => 'ugi', 'unitig_21.g20219' => 'ugi', 'unitig_21.g20416' => 'ugi', 'unitig_578.g16132' => 'ugi', 'unitig_578.g16718' => 'ugi', 'unitig_62.g23481' => 'ugi', 'unitig_744.g24535' => 'ugi', 'unitig_749.g13525' => 'ugi', 'vmacro01248' => 'vma', 'vmacro02290' => 'vma', 'vmacro10946' => 'vma', 'vmacro11865' => 'vma', 'vmacro12493' => 'vma', 'vmacro17322' => 'vma', 'vmacro21599' => 'vma', 'vmacro23041' => 'vma', 'VMungo0251G0004' => 'vmu', 'VMungo0251G2639' => 'vmu', 'VMungo0251G2967' => 'vmu', 'VMungo0540G0864' => 'vmu', 'VMungo0540G1569' => 'vmu', 'VMungo0647G0317' => 'vmu', 'VMungo0720G1373' => 'vmu', 'VMungo0720G1508' => 'vmu', 'VMungo1080G0485' => 'vmu', 'VMungo1215G3177' => 'vmu', 'Zm00001eb112600' => 'zma', 'Zm00001eb120220' => 'zma', 'Zm00001eb153240' => 'zma', 'Zm00001eb168880' => 'zma', 'Zm00001eb213920' => 'zma', 'Zm00001eb228280' => 'zma', 'Zm00001eb254580' => 'zma', 'Zm00001eb272180' => 'zma', 'Zm00001eb293190' => 'zma', 'Zm00001eb322930' => 'zma', 'Zm00001eb353360' => 'zma', 'Zm00001eb353390' => 'zma', 'Zm00001eb353430' => 'zma', 'Zm00001eb353440' => 'zma', 'Zm00001eb353780' => 'zma' ) $gf_id = 'HOM05D000499' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000499' ) $data_identifier = 'HOM05D000499' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 29, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 12, 'amhyb' => (int) 8, 'aly' => (int) 12, 'aox' => (int) 9, 'arhy' => (int) 26, 'ath' => (int) 8, 'atr' => (int) 7, 'acertr' => (int) 10, 'cqu' => (int) 15, 'bca' => (int) 29, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 11, 'cansat' => (int) 8, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 9, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 8, 'cpa' => (int) 10, 'csa' => (int) 7, 'camsi' => (int) 20, 'dca' => (int) 8, 'din' => (int) 12, 'dzi' => (int) 14, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 6, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 38, 'gra' => (int) 16, 'vvi' => (int) 8, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 5, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 11, 'lja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 11, 'mpo' => (int) 3, 'mbi' => (int) 14, 'mdo' => (int) 14, 'mtr' => (int) 8, 'cme' => (int) 9, 'egut' => (int) 9, 'ama' => (int) 11, 'nta' => (int) 17, 'nnu' => (int) 11, 'oeu' => (int) 18, 'osa' => (int) 8, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 6, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 9, 'rsi' => (int) 9, 'sbr' => (int) 10, 'sbo' => (int) 8, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 10, 'sas' => (int) 10, 'shi' => (int) 6, 'smo' => (int) 7, 'sly' => (int) 14, 'spe' => (int) 10, 'spa' => (int) 8, 'tar' => (int) 19, 'tha' => (int) 10, 'tca' => (int) 8, 'esa' => (int) 8, 'tpr' => (int) 11, 'twi' => (int) 13, 'ugi' => (int) 9, 'vma' => (int) 8, 'vmu' => (int) 10, 'zma' => (int) 15 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb353780' $species_info = array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ) $local_species = 'lal' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000499', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1066', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p29780' => 'bna', 'A02p33180' => 'bna', 'A03p16470' => 'bna', 'A03p66010' => 'bna', 'A04p25970' => 'bna', 'A06p01270' => 'bna', 'A06p46080' => 'bna', 'A07p11400' => 'bna', 'A08p01840' => 'bna', 'A08p08230' => 'bna', 'A08p25740' => 'bna', 'A09p32070' => 'bna', 'A09p37830' => 'bna', 'A09p42840' => 'bna', 'A09p42850' => 'bna', 'Aa31LG10G2060' => 'aar', 'Aa31LG2G7410' => 'aar', 'Aa31LG6G10200' => 'aar', 'Aa31LG6G16680' => 'aar', 'Aa31LG6G8470' => 'aar', 'Aa31LG9G12730' => 'aar', 'Aa31LG9G13680' => 'aar', 'Aa31LG9G14920' => 'aar', 'Aa31LG9G6650' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4977' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5467' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3254' => 'aag', 'Actinidia02578' => 'ach', 'Actinidia07693' => 'ach', 'Actinidia08413' => 'ach', 'Actinidia08414' => 'ach', 'Actinidia15289' => 'ach', 'Actinidia19871' => 'ach', 'Actinidia21475' => 'ach', 'Actinidia22576' => 'ach', 'Actinidia28327' => 'ach', 'Actinidia32491' => 'ach', 'Actinidia39463' => 'ach', 'Actinidia39571' => 'ach', 'Ah.01g013750' => 'amhyb', 'Ah.01g023210' => 'amhyb', 'Ah.04g164850' => 'amhyb', 'Ah.05g178060' => 'amhyb', 'Ah.07g204270' => 'amhyb', 'Ah.07g208480' => 'amhyb', 'Ah.09g237410' => 'amhyb', 'Ah.14g089460' => 'amhyb', 'AL1G41790' => 'aly', 'AL1G49050' => 'aly', 'AL1G53810' => 'aly', 'AL1G61400' => 'aly', 'AL4G18580' => 'aly', 'AL5G12510' => 'aly', 'AL5G12540' => 'aly', 'AL6G43230' => 'aly', 'AL7G10370' => 'aly', 'AL7G19250' => 'aly', 'AL8G12240' => 'aly', 'AL8G18540' => 'aly', 'Aqoxy1G02409' => 'aox', 'Aqoxy2G03993' => 'aox', 'Aqoxy3G03357' => 'aox', 'Aqoxy4G00785' => 'aox', 'Aqoxy5G02598' => 'aox', 'Aqoxy6G00132' => 'aox', 'Aqoxy7G01776' => 'aox', 'Aqoxy7G02316' => 'aox', 'Aqoxy7G03973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.12AFKW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B8730' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27IQR1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3F75VG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3RE0GA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41TCQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.527VTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FIR39' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5W8UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DA38EV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ63HS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H1I32C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HC27T5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4M8AP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7N3CZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9UVDZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LS1NQA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT1D4B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SKC4TM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCFV76' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF9Q1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQWD9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1ZM88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WE07RT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YCK7VH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJE6Q6' => 'arhy', 'AT1G28240' => 'ath', 'AT1G34550' => 'ath', 'AT1G53040' => 'ath', 'AT2G02910' => 'ath', 'AT4G09630' => 'ath', 'AT4G38500' => 'ath', 'AT5G42660' => 'ath', 'AT5G46220' => 'ath', 'ATR0152G026' => 'atr', 'ATR0564G343' => 'atr', 'ATR0706G151' => 'atr', 'ATR0733G207' => 'atr', 'ATR0751G234' => 'atr', 'ATR0807G048' => 'atr', 'ATR1091G084' => 'atr', 'Atru.chr10.1229' => 'acertr', 'Atru.chr10.1230' => 'acertr', 'Atru.chr10.1874' => 'acertr', 'Atru.chr11.1808' => 'acertr', 'Atru.chr13.1795' => 'acertr', 'Atru.chr13.570' => 'acertr', 'Atru.chr2.2608' => 'acertr', 'Atru.chr2.2609' => 'acertr', 'Atru.chr5.3428' => 'acertr', 'Atru.chr8.1171' => 'acertr', 'AUR62004651' => 'cqu', 'AUR62008675' => 'cqu', 'AUR62010014' => 'cqu', 'AUR62013004' => 'cqu', 'AUR62014825' => 'cqu', 'AUR62015015' => 'cqu', 'AUR62015151' => 'cqu', 'AUR62017020' => 'cqu', 'AUR62019422' => 'cqu', 'AUR62023570' => 'cqu', 'AUR62025571' => 'cqu', 'AUR62029098' => 'cqu', 'AUR62033863' => 'cqu', 'AUR62034296' => 'cqu', 'AUR62040075' => 'cqu', 'BcaB02g07334' => 'bca', 'BcaB02g10575' => 'bca', 'BcaB03g12119' => 'bca', 'BcaB03g12120' => 'bca', 'BcaB03g13945' => 'bca', 'BcaB04g17123' => 'bca', 'BcaB04g17867' => 'bca', 'BcaB04g19839' => 'bca', 'BcaB07g30317' => 'bca', 'BcaB07g32432' => 'bca', 'BcaB07g33362' => 'bca', 'BcaB08g36611' => 'bca', 'BcaC01g00028' => 'bca', 'BcaC01g01356' => 'bca', 'BcaC01g02034' => 'bca', 'BcaC01g06051' => 'bca', 'BcaC03g16839' => 'bca', 'BcaC03g17176' => 'bca', 'BcaC05g26829' => 'bca', 'BcaC06g31490' => 'bca', 'BcaC06g35344' => 'bca', 'BcaC06g36570' => 'bca', 'BcaC07g37537' => 'bca', 'BcaC08g43491' => 'bca', 'BcaC08g43773' => 'bca', 'BcaNung00234' => 'bca', 'BcaNung01982' => 'bca', 'BcaNung03707' => 'bca', 'BcaNung06454' => 'bca', 'BolC2t10762H' => 'bol', 'BolC2t11191H' => 'bol', 'BolC3t14322H' => 'bol', 'BolC3t19747H' => 'bol', 'BolC3t21425H' => 'bol', 'BolC4t27800H' => 'bol', 'BolC5t31423H' => 'bol', 'BolC6t35951H' => 'bol', 'BolC6t36282H' => 'bol', 'BolC7t40678H' => 'bol', 'BolC7t40679H' => 'bol', 'BolC7t42222H' => 'bol', 'BolC7t43492H' => 'bol', 'BolC7t46785H' => 'bol', 'BolC8t47853H' => 'bol', 'BolC9t56805H' => 'bol', 'BraA02t08000Z' => 'bra', 'BraA02t08341Z' => 'bra', 'BraA03t10936Z' => 'bra', 'BraA03t15657Z' => 'bra', 'BraA04t18100Z' => 'bra', 'BraA05t20523Z' => 'bra', 'BraA06t23353Z' => 'bra', 'BraA06t27473Z' => 'bra', 'BraA06t27769Z' => 'bra', 'BraA07t28928Z' => 'bra', 'BraA08t32236Z' => 'bra', 'BraA08t32841Z' => 'bra', 'BraA08t34524Z' => 'bra', 'BraA09t38742Z' => 'bra', 'BraA09t39295Z' => 'bra', 'C02p47180' => 'bna', 'C02p50990' => 'bna', 'C03p19360' => 'bna', 'C03p74950' => 'bna', 'C03p91000' => 'bna', 'C04p63260' => 'bna', 'C05p27050' => 'bna', 'C06p08750' => 'bna', 'C06p11490' => 'bna', 'C07p02820' => 'bna', 'C07p17180' => 'bna', 'C07p29440' => 'bna', 'C07p63730' => 'bna', 'C09p39260' => 'bna', 'CAN.G1164.34' => 'can', 'CAN.G1164.39' => 'can', 'CAN.G1530.3' => 'can', 'CAN.G162.61' => 'can', 'CAN.G176.6' => 'can', 'CAN.G289.49' => 'can', 'CAN.G370.21' => 'can', 'CAN.G370.22' => 'can', 'CAN.G371.117' => 'can', 'CAN.G58.37' => 'can', 'CAN.G588.98' => 'can', 'CANSAT21G2266' => 'cansat', 'CANSAT25G2799' => 'cansat', 'CANSAT35G0862' => 'cansat', 'CANSAT35G1704' => 'cansat', 'CANSAT35G1760' => 'cansat', 'CANSAT56G3971' => 'cansat', 'CANSAT56G4116' => 'cansat', 'CANSAT80G1259' => 'cansat', 'CARHR027730' => 'chi', 'CARHR033880' => 'chi', 'CARHR043270' => 'chi', 'CARHR145330' => 'chi', 'CARHR145340' => 'chi', 'CARHR175570' => 'chi', 'CARHR181570' => 'chi', 'CARHR258470' => 'chi', 'CARHR260490' => 'chi', 'CARHR294220' => 'chi', 'Carub.0001s2668' => 'cru', 'Carub.0001s3257' => 'cru', 'Carub.0001s4220' => 'cru', 'Carub.0005s0179' => 'cru', 'Carub.0006s2807' => 'cru', 'Carub.0007s0039' => 'cru', 'Carub.0008s0169' => 'cru', 'Carub.0008s0636' => 'cru', 'Ca_00338_v3' => 'car', 'Ca_00542_v3' => 'car', 'Ca_01844_v3' => 'car', 'Ca_10611_v3' => 'car', 'Ca_13326_v3' => 'car', 'Ca_17944_v3' => 'car', 'Ca_18546_v3' => 'car', 'Ca_24219_v3' => 'car', 'Ca_29972_v3' => 'car', 'CBR_g3681' => 'cbr', 'CBR_g40021' => 'cbr', 'Cc01_g08140' => 'ccan', 'Cc02_g13410' => 'ccan', 'Cc02_g37480' => 'ccan', 'Cc05_g12030' => 'ccan', 'Cc09_g03370' => 'ccan', 'Cc09_g10300' => 'ccan', 'Cc10_g03530' => 'ccan', 'Cc10_g11380' => 'ccan', 'CDE01G0176' => 'cde', 'CDE02G0675' => 'cde', 'CDE02G0942' => 'cde', 'CDE02G1153' => 'cde', 'CDE02G4177' => 'cde', 'CDE04G2117' => 'cde', 'CDE04G2736' => 'cde', 'CDE08G1161' => 'cde', 'CDE09G1238' => 'cde', 'Cfa000467' => 'cfa', 'Cfa000947' => 'cfa', 'Cfa004969' => 'cfa', 'Cfa005284' => 'cfa', 'Cfa008993' => 'cfa', 'Cfa018187' => 'cfa', 'Cfa018454' => 'cfa', 'Cfa020585' => 'cfa', 'Ciclev10000424m.g' => 'ccl', 'Ciclev10003605m.g' => 'ccl', 'Ciclev10007828m.g' => 'ccl', 'Ciclev10014620m.g' => 'ccl', 'Ciclev10015169m.g' => 'ccl', 'Ciclev10018291m.g' => 'ccl', 'Ciclev10028256m.g' => 'ccl', 'Ciclev10033822m.g' => 'ccl', 'CiPaw.05G060300' => 'cil', 'CiPaw.05G085000' => 'cil', 'CiPaw.06G083700' => 'cil', 'CiPaw.06G120300' => 'cil', 'CiPaw.09G060500' => 'cil', 'CiPaw.09G123800' => 'cil', 'CiPaw.11G169700' => 'cil', 'CiPaw.12G118300' => 'cil', 'CiPaw.15G071000' => 'cil', 'CiPaw.15G081900' => 'cil', 'ClCG01G024610' => 'cla', 'ClCG03G006070' => 'cla', 'ClCG05G019250' => 'cla', 'ClCG09G009500' => 'cla', 'ClCG11G008200' => 'cla', 'ClCG11G018080' => 'cla', 'COL.COLO4_17373' => 'col', 'COL.COLO4_22994' => 'col', 'COL.COLO4_26389' => 'col', 'COL.COLO4_27170' => 'col', 'COL.COLO4_31074' => 'col', 'COL.COLO4_31465' => 'col', 'COL.COLO4_36438' => 'col', 'COL.COLO4_36439' => 'col', 'Cpa.g.c38781' => 'cpa', 'Cpa.g.sc128.12' => 'cpa', 'Cpa.g.sc166.7' => 'cpa', 'Cpa.g.sc166.8' => 'cpa', 'Cpa.g.sc20.111' => 'cpa', 'Cpa.g.sc27.31' => 'cpa', 'Cpa.g.sc64.36' => 'cpa', 'Cpa.g.sc64.37' => 'cpa', 'Cpa.g.sc66.49' => 'cpa', 'Cpa.g.sc80.64' => 'cpa', 'CsaV3_1G012320' => 'csa', 'CsaV3_2G008480' => 'csa', 'CsaV3_2G033450' => 'csa', 'CsaV3_3G044830' => 'csa', 'CsaV3_4G033710' => 'csa', 'CsaV3_6G051730' => 'csa', 'CsaV3_7G025350' => 'csa', 'CSS0001067' => 'camsi', 'CSS0005996' => 'camsi', 'CSS0006590' => 'camsi', 'CSS0009673' => 'camsi', 'CSS0010201' => 'camsi', 'CSS0010549' => 'camsi', 'CSS0011364' => 'camsi', 'CSS0014473' => 'camsi', 'CSS0014961' => 'camsi', 'CSS0020191' => 'camsi', 'CSS0021165' => 'camsi', 'CSS0022306' => 'camsi', 'CSS0030591' => 'camsi', 'CSS0030696' => 'camsi', 'CSS0032653' => 'camsi', 'CSS0037487' => 'camsi', 'CSS0041102' => 'camsi', 'CSS0041261' => 'camsi', 'CSS0046246' => 'camsi', 'CSS0049256' => 'camsi', 'DCAR_004075' => 'dca', 'DCAR_011538' => 'dca', 'DCAR_019553' => 'dca', 'DCAR_020952' => 'dca', 'DCAR_021739' => 'dca', 'DCAR_027407' => 'dca', 'DCAR_027913' => 'dca', 'DCAR_028066' => 'dca', 'Dinv05899' => 'din', 'Dinv07563' => 'din', 'Dinv08010' => 'din', 'Dinv14125' => 'din', 'Dinv20172' => 'din', 'Dinv30743' => 'din', 'Dinv31229' => 'din', 'Dinv34162' => 'din', 'Dinv36028' => 'din', 'Dinv39368' => 'din', 'Dinv40565' => 'din', 'Dinv41706' => 'din', 'Duzib052G0089' => 'dzi', 'Duzib116G0641' => 'dzi', 'Duzib132G0069' => 'dzi', 'Duzib132G1219' => 'dzi', 'Duzib147G0278' => 'dzi', 'Duzib160G0480' => 'dzi', 'Duzib170G0661' => 'dzi', 'Duzib177G0591' => 'dzi', 'Duzib187G1353' => 'dzi', 'Duzib192G0858' => 'dzi', 'Duzib192G0883' => 'dzi', 'Duzib213G0506' => 'dzi', 'Duzib235G0289' => 'dzi', 'Duzib251G0422' => 'dzi', 'ECA232G3898' => 'eca', 'ECA233G5950' => 'eca', 'ECA234G1699' => 'eca', 'ECA234G2421' => 'eca', 'ECA236G0426' => 'eca', 'ECA236G4331' => 'eca', 'ECA248G2573' => 'eca', 'EL10Ac1g00077' => 'bvu', 'EL10Ac1g01746' => 'bvu', 'EL10Ac2g03464' => 'bvu', 'EL10Ac4g08176' => 'bvu', 'EL10Ac7g17521' => 'bvu', 'EL10Ac8g20386' => 'bvu', 'EL10Ac9g21343' => 'bvu', 'EL10Ac9g22688' => 'bvu', 'Eucgr.B03434' => 'egr', 'Eucgr.D00618' => 'egr', 'Eucgr.E02395' => 'egr', 'Eucgr.F01129' => 'egr', 'Eucgr.F02622' => 'egr', 'Eucgr.F04207' => 'egr', 'FAN01G0570' => 'fan', 'FAN03G3351' => 'fan', 'FAN06G3702' => 'fan', 'FAN07G2149' => 'fan', 'FAN10G3758' => 'fan', 'FAN11G1170' => 'fan', 'FAN11G2050' => 'fan', 'FAN11G2724' => 'fan', 'FAN12G1700' => 'fan', 'FAN12G2028' => 'fan', 'FAN15G1160' => 'fan', 'FAN15G3063' => 'fan', 'FAN16G2540' => 'fan', 'FAN16G3077' => 'fan', 'FAN16G3624' => 'fan', 'FAN17G0221' => 'fan', 'FAN20G2492' => 'fan', 'FAN20G2905' => 'fan', 'FAN21G0548' => 'fan', 'FAN21G1300' => 'fan', 'FAN22G0077' => 'fan', 'FAN22G1315' => 'fan', 'FAN24G1280' => 'fan', 'FAN24G1445' => 'fan', 'FAN24G3527' => 'fan', 'FAN25G0464' => 'fan', 'FAN25G2885' => 'fan', 'FAN25G3270' => 'fan', 'FAN27G1101' => 'fan', 'FAN27G2846' => 'fan', 'FAN27G3524' => 'fan', 'FvH4_2g11770' => 'fve', 'FvH4_2g15630' => 'fve', 'FvH4_3g05570' => 'fve', 'FvH4_3g09110' => 'fve', 'FvH4_3g19940' => 'fve', 'FvH4_4g04821' => 'fve', 'FvH4_4g31480' => 'fve', 'FvH4_7g01740' => 'fve', 'Glyma.05G130400' => 'gma', 'Glyma.05G156400' => 'gma', 'Glyma.07G197000' => 'gma', 'Glyma.08G085151' => 'gma', 'Glyma.08G114500' => 'gma', 'Glyma.08G300400' => 'gma', 'Glyma.10G215800' => 'gma', 'Glyma.12G224400' => 'gma', 'Glyma.13G179300' => 'gma', 'Glyma.13G218151' => 'gma', 'Glyma.13G238800' => 'gma', 'Glyma.13G276900' => 'gma', 'Glyma.14G078200' => 'gma', 'Glyma.15G074500' => 'gma', 'Glyma.15G094100' => 'gma', 'Glyma.17G247200' => 'gma', 'Glyma.18G120100' => 'gma', 'Glyma.20G176000' => 'gma', 'Gohir.A01G063600' => 'ghi', 'Gohir.A01G170301' => 'ghi', 'Gohir.A02G060500' => 'ghi', 'Gohir.A05G133850' => 'ghi', 'Gohir.A05G161400' => 'ghi', 'Gohir.A06G012900' => 'ghi', 'Gohir.A06G035901' => 'ghi', 'Gohir.A06G127100' => 'ghi', 'Gohir.A06G210500' => 'ghi', 'Gohir.A08G008650' => 'ghi', 'Gohir.A09G072700' => 'ghi', 'Gohir.A09G088301' => 'ghi', 'Gohir.A10G040600' => 'ghi', 'Gohir.A12G036300' => 'ghi', 'Gohir.A12G143350' => 'ghi', 'Gohir.A12G165500' => 'ghi', 'Gohir.A13G145700' => 'ghi', 'Gohir.D01G050000' => 'ghi', 'Gohir.D01G051366' => 'ghi', 'Gohir.D01G161350' => 'ghi', 'Gohir.D02G065900' => 'ghi', 'Gohir.D05G164200' => 'ghi', 'Gohir.D05G355500' => 'ghi', 'Gohir.D06G010400' => 'ghi', 'Gohir.D06G111250' => 'ghi', 'Gohir.D06G132000' => 'ghi', 'Gohir.D06G210500' => 'ghi', 'Gohir.D07G165675' => 'ghi', 'Gohir.D08G062240' => 'ghi', 'Gohir.D08G086101' => 'ghi', 'Gohir.D08G138060' => 'ghi', 'Gohir.D09G072300' => 'ghi', 'Gohir.D10G041400' => 'ghi', 'Gohir.D11G191020' => 'ghi', 'Gohir.D11G212066' => 'ghi', 'Gohir.D12G036300' => 'ghi', 'Gohir.D12G168600' => 'ghi', 'Gohir.D13G150600' => 'ghi', 'Gorai.001G057300' => 'gra', 'Gorai.002G069900' => 'gra', 'Gorai.002G200000' => 'gra', 'Gorai.003G067600' => 'gra', 'Gorai.005G074800' => 'gra', 'Gorai.006G087300' => 'gra', 'Gorai.008G037500' => 'gra', 'Gorai.008G181400' => 'gra', 'Gorai.009G169400' => 'gra', 'Gorai.009G387900' => 'gra', 'Gorai.010G013300' => 'gra', 'Gorai.010G153800' => 'gra', 'Gorai.010G255800' => 'gra', 'Gorai.011G043700' => 'gra', 'Gorai.011G198900' => 'gra', 'Gorai.013G168400' => 'gra', 'GSVIVG01005212001' => 'vvi', 'GSVIVG01006163001' => 'vvi', 'GSVIVG01009625001' => 'vvi', 'GSVIVG01014338001' => 'vvi', 'GSVIVG01020005001' => 'vvi', 'GSVIVG01021450001' => 'vvi', 'GSVIVG01023975001' => 'vvi', 'GSVIVG01034490001' => 'vvi', 'HanXRQChr04g0112071' => 'han', 'HanXRQChr05g0131151' => 'han', 'HanXRQChr09g0262371' => 'han', 'HanXRQChr09g0268401' => 'han', 'HanXRQChr10g0279241' => 'han', 'HanXRQChr10g0297961' => 'han', 'HanXRQChr11g0326231' => 'han', 'HanXRQChr11g0328471' => 'han', 'HanXRQChr16g0507941' => 'han', 'HanXRQChr17g0560211' => 'han', 'Haze_02108' => 'cav', 'Haze_02428' => 'cav', 'Haze_05593' => 'cav', 'Haze_06448' => 'cav', 'Haze_09427' => 'cav', 'Haze_12022' => 'cav', 'Haze_17612' => 'cav', 'Haze_17928' => 'cav', 'Hma1.2p1_0032F.1_g019250' => 'hma', 'Hma1.2p1_0163F.1_g072690' => 'hma', 'Hma1.2p1_0265F.1_g106710' => 'hma', 'Hma1.2p1_0286F.1_g113970' => 'hma', 'Hma1.2p1_0363F.1_g136640' => 'hma', 'Hma1.2p1_0584F.1_g183470' => 'hma', 'Hma1.2p1_0885F.1_g232570' => 'hma', 'HPP92_006022' => 'vpl', 'HPP92_007320' => 'vpl', 'HPP92_011521' => 'vpl', 'HPP92_019387' => 'vpl', 'HPP92_024038' => 'vpl', 'Hund05891' => 'sun', 'Hund06450' => 'sun', 'Hund12053' => 'sun', 'Hund16800' => 'sun', 'Hund21222' => 'sun', 'Hund22896' => 'sun', 'Hund23746' => 'sun', 'Hund27083' => 'sun', 'Lalb_Chr02g0141831' => 'lal', 'Lalb_Chr02g0141841' => 'lal', 'Lalb_Chr05g0220411' => 'lal', 'Lalb_Chr06g0162081' => 'lal', 'Lalb_Chr09g0327651' => 'lal', 'Lalb_Chr13g0295051' => 'lal', 'Lalb_Chr15g0086801' => 'lal', 'Lalb_Chr16g0383781' => 'lal', 'Lalb_Chr16g0383791' => 'lal', 'Lalb_Chr18g0055441' => 'lal', 'Lalb_Chr18g0059611' => 'lal', 'Lalb_Chr20g0109661' => 'lal', 'Lalb_Chr20g0109831' => 'lal', 'Lalb_Chr20g0121871' => 'lal', 'Lalb_Chr22g0355361' => 'lal', 'Lalb_Chr25g0286371' => 'lal', 'Lj1A1187G43' => 'lonja', 'Lj1A1205T50' => 'lonja', 'Lj1A800G33' => 'lonja', 'Lj1C1187T7' => 'lonja', 'Lj1C843T11' => 'lonja', 'Lj1g0010940' => 'lja', 'Lj2A288T69' => 'lonja', 'Lj3g0024276' => 'lja', 'Lj4A47T76' => 'lonja', 'Lj4g0005805' => 'lja', 'Lj4g0006097' => 'lja', 'Lj4g0008528' => 'lja', 'Lj4g0024907' => 'lja', 'Lj5g0012472' => 'lja', 'Lj5g0018648' => 'lja', 'Lj6C789G1' => 'lonja', 'Lj6g0004000' => 'lja', 'Lj7A292G67' => 'lonja', 'Lj7A292T64' => 'lonja', 'Lj9A400T58' => 'lonja', 'Lsat_1_v5_gn_1_126181' => 'lsa', 'Lsat_1_v5_gn_4_123041' => 'lsa', 'Lsat_1_v5_gn_4_133620' => 'lsa', 'Lsat_1_v5_gn_4_53221' => 'lsa', 'Lsat_1_v5_gn_4_71961' => 'lsa', 'Lsat_1_v5_gn_7_105241' => 'lsa', 'Lsat_1_v5_gn_7_21361' => 'lsa', 'Lsat_1_v5_gn_7_28860' => 'lsa', 'Lsat_1_v5_gn_7_31260' => 'lsa', 'Lsat_1_v5_gn_8_52801' => 'lsa', 'Manes.02G191400' => 'mes', 'Manes.03G110100' => 'mes', 'Manes.04G071100' => 'mes', 'Manes.05G100500' => 'mes', 'Manes.05G164700' => 'mes', 'Manes.15G087000' => 'mes', 'Manes.15G121500' => 'mes', 'Manes.16G028300' => 'mes', 'Manes.17G046100' => 'mes', 'Manes.17G069800' => 'mes', 'Manes.18G100500' => 'mes', 'Mapoly0002s0109' => 'mpo', 'Mapoly0024s0007' => 'mpo', 'Mapoly0089s0032' => 'mpo', 'MBI04_g42241_MAGBIO' => 'mbi', 'MBI05_g11988_MAGBIO' => 'mbi', 'MBI05_g35452_MAGBIO' => 'mbi', 'MBI07_g30179_MAGBIO' => 'mbi', 'MBI07_g35859_MAGBIO' => 'mbi', 'MBI07_g35860_MAGBIO' => 'mbi', 'MBI07_g37166_MAGBIO' => 'mbi', 'MBI08_g18172_MAGBIO' => 'mbi', 'MBI09_g08441_MAGBIO' => 'mbi', 'MBI13_g01676_MAGBIO' => 'mbi', 'MBI14_g42955_MAGBIO' => 'mbi', 'MBI16_g13161_MAGBIO' => 'mbi', 'MBI17_g27204_MAGBIO' => 'mbi', 'MBI19_g21595_MAGBIO' => 'mbi', 'MD00G1148400' => 'mdo', 'MD02G1301200' => 'mdo', 'MD03G1227800' => 'mdo', 'MD05G1041100' => 'mdo', 'MD05G1124800' => 'mdo', 'MD05G1284000' => 'mdo', 'MD05G1338800' => 'mdo', 'MD05G1338900' => 'mdo', 'MD07G1022800' => 'mdo', 'MD10G1047500' => 'mdo', 'MD10G1127500' => 'mdo', 'MD10G1262300' => 'mdo', 'MD10G1293800' => 'mdo', 'MD16G1074300' => 'mdo', 'Medtr1g021670' => 'mtr', 'Medtr1g096320' => 'mtr', 'Medtr2g013690' => 'mtr', 'Medtr2g019450' => 'mtr', 'Medtr2g085170' => 'mtr', 'Medtr4g088785' => 'mtr', 'Medtr8g055930' => 'mtr', 'Medtr8g085850' => 'mtr', 'MELO3C002605.2' => 'cme', 'MELO3C003891.2' => 'cme', 'MELO3C004012.2' => 'cme', 'MELO3C007134.2' => 'cme', 'MELO3C008118.2' => 'cme', 'MELO3C016700.2' => 'cme', 'MELO3C024127.2' => 'cme', 'MELO3C033361.2' => 'cme', 'MELO3C033362.2' => 'cme', 'Migut.C00430' => 'egut', 'Migut.C01246' => 'egut', 'Migut.E00101' => 'egut', 'Migut.H01486' => 'egut', 'Migut.H01939' => 'egut', 'Migut.K00360' => 'egut', 'Migut.M00910' => 'egut', 'Migut.M01139' => 'egut', 'Migut.N02677' => 'egut', 'MSTRG.13252' => 'ama', 'MSTRG.14701' => 'ama', 'MSTRG.1521' => 'ama', 'MSTRG.15884' => 'ama', 'MSTRG.16242' => 'ama', 'MSTRG.22285' => 'ama', 'MSTRG.22444' => 'ama', 'MSTRG.2349' => 'ama', 'MSTRG.26308' => 'ama', 'MSTRG.28296' => 'ama', 'MSTRG.9895' => 'ama', 'Nitab4.5_0000110g0060' => 'nta', 'Nitab4.5_0000420g0130' => 'nta', 'Nitab4.5_0000422g0030' => 'nta', 'Nitab4.5_0000560g0180' => 'nta', 'Nitab4.5_0000703g0100' => 'nta', 'Nitab4.5_0000786g0200' => 'nta', 'Nitab4.5_0001336g0020' => 'nta', 'Nitab4.5_0001796g0030' => 'nta', 'Nitab4.5_0003348g0060' => 'nta', 'Nitab4.5_0003698g0040' => 'nta', 'Nitab4.5_0003942g0090' => 'nta', 'Nitab4.5_0004775g0070' => 'nta', 'Nitab4.5_0004864g0030' => 'nta', 'Nitab4.5_0005615g0020' => 'nta', 'Nitab4.5_0009288g0030' => 'nta', 'Nitab4.5_0009341g0010' => 'nta', 'Nitab4.5_0009535g0010' => 'nta', 'Nn1g03995' => 'nnu', 'Nn1g04100' => 'nnu', 'Nn1g06530' => 'nnu', 'Nn3g16404' => 'nnu', 'Nn3g17212' => 'nnu', 'Nn3g20776' => 'nnu', 'Nn3g21923' => 'nnu', 'Nn5g27737' => 'nnu', 'Nn5g29461' => 'nnu', 'Nn7g38355' => 'nnu', 'Nn8g39873' => 'nnu', 'Oeu000548.2' => 'oeu', 'Oeu004672.1' => 'oeu', 'Oeu015605.2' => 'oeu', 'Oeu016092.1' => 'oeu', 'Oeu017879.3' => 'oeu', 'Oeu024910.1' => 'oeu', 'Oeu028965.1' => 'oeu', 'Oeu031269.1' => 'oeu', 'Oeu031270.1' => 'oeu', 'Oeu032535.1' => 'oeu', 'Oeu034151.1' => 'oeu', 'Oeu034152.1' => 'oeu', 'Oeu034588.2' => 'oeu', 'Oeu050846.1' => 'oeu', 'Oeu050849.2' => 'oeu', 'Oeu051063.2' => 'oeu', 'Oeu052368.1' => 'oeu', 'Oeu052370.1' => 'oeu', 'Os01g0210400' => 'osa', 'Os01g0304300' => 'osa', 'Os01g0749100' => 'osa', 'Os02g0745800' => 'osa', 'Os03g0769050' => 'osa', 'Os05g0531500' => 'osa', 'Os06g0724300' => 'osa', 'Os11g0198100' => 'osa', 'Peaxi162Scf00069g01425' => 'pax', 'Peaxi162Scf00280g00811' => 'pax', 'Peaxi162Scf00310g00615' => 'pax', 'Peaxi162Scf00362g00542' => 'pax', 'Peaxi162Scf00461g00310' => 'pax', 'Peaxi162Scf00530g00118' => 'pax', 'Peaxi162Scf00541g00057' => 'pax', 'Peaxi162Scf00661g00017' => 'pax', 'Peaxi162Scf00926g00027' => 'pax', 'Peaxi162Scf01064g00263' => 'pax', 'Peaxi162Scf01211g00135' => 'pax', 'PGR004G2336' => 'pgr', 'PGR042G0327' => 'pgr', 'PGR042G1957' => 'pgr', 'PGR042G2003' => 'pgr', 'PGR042G3929' => 'pgr', 'PGR083G1137' => 'pgr', 'PGR083G1364' => 'pgr', 'PGSC0003DMG400003381' => 'stu', 'PGSC0003DMG400003417' => 'stu', 'PGSC0003DMG400008981' => 'stu', 'PGSC0003DMG400012417' => 'stu', 'PGSC0003DMG400012823' => 'stu', 'PGSC0003DMG400016885' => 'stu', 'PGSC0003DMG400022812' => 'stu', 'PGSC0003DMG400029726' => 'stu', 'PGSC0003DMG401009243' => 'stu', 'PGSC0003DMG401031505' => 'stu', 'PGSC0003DMG402031505' => 'stu', 'Phvul.001G017600' => 'pvu', 'Phvul.002G193500' => 'pvu', 'Phvul.002G228900' => 'pvu', 'Phvul.002G236800' => 'pvu', 'Phvul.003G049500' => 'pvu', 'Phvul.005G072000' => 'pvu', 'Phvul.006G164800' => 'pvu', 'Phvul.006G185100' => 'pvu', 'Phvul.007G090000' => 'pvu', 'Potri.001G399800' => 'ptr', 'Potri.002G149900' => 'ptr', 'Potri.004G044100' => 'ptr', 'Potri.004G177600' => 'ptr', 'Potri.009G138000' => 'ptr', 'Potri.010G094000' => 'ptr', 'Potri.011G053000' => 'ptr', 'Potri.011G119300' => 'ptr', 'Potri.013G113700' => 'ptr', 'Potri.018G107800' => 'ptr', 'Potri.019G084100' => 'ptr', 'Pp3c14_23720' => 'ppa', 'Pp3c16_6340' => 'ppa', 'Pp3c23_13420' => 'ppa', 'Pp3c24_2740' => 'ppa', 'Pp3c25_860' => 'ppa', 'Pp3c8_21750' => 'ppa', 'Prupe.1G273000' => 'ppe', 'Prupe.1G273700' => 'ppe', 'Prupe.1G274100' => 'ppe', 'Prupe.2G023300' => 'ppe', 'Prupe.4G048000' => 'ppe', 'Prupe.4G080400' => 'ppe', 'Prupe.4G181200' => 'ppe', 'Prupe.8G056900' => 'ppe', 'Prupe.8G168700' => 'ppe', 'Psat1g189080' => 'psa', 'Psat1g204760' => 'psa', 'Psat4g175560' => 'psa', 'Psat4g177720' => 'psa', 'Psat5g244240' => 'psa', 'Psat6g010720' => 'psa', 'Psat6g187200' => 'psa', 'Psat7g072040' => 'psa', 'PSO017G3501' => 'pso', 'PSO063G2148' => 'pso', 'PSO063G5608' => 'pso', 'PSO210G6392' => 'pso', 'PSO541G2319' => 'pso', 'PSO541G2836' => 'pso', 'PSO541G4012' => 'pso', 'PSO541G6253' => 'pso', 'PSO675G0580' => 'pso', 'PSO675G0856' => 'pso', 'PSO675G5635' => 'pso', 'PSO675G9157' => 'pso', 'PSO832G1660' => 'pso', 'PSO832G1969' => 'pso', 'QL02p007186' => 'qlo', 'QL02p033904' => 'qlo', 'QL03p064391' => 'qlo', 'QL05p040593' => 'qlo', 'QL05p058242' => 'qlo', 'QL08p021825' => 'qlo', 'QL11p004981' => 'qlo', 'RcHm_v2.0_Chr1g0318301' => 'rch', 'RcHm_v2.0_Chr4g0418501' => 'rch', 'RcHm_v2.0_Chr4g0439971' => 'rch', 'RcHm_v2.0_Chr5g0008541' => 'rch', 'RcHm_v2.0_Chr5g0014101' => 'rch', 'RcHm_v2.0_Chr5g0014131' => 'rch', 'RcHm_v2.0_Chr5g0033621' => 'rch', 'RcHm_v2.0_Chr6g0272041' => 'rch', 'RcHm_v2.0_Chr6g0278831' => 'rch', 'Rhsim02G0130400' => 'rsi', 'Rhsim02G0171100' => 'rsi', 'Rhsim05G0053000' => 'rsi', 'Rhsim05G0053100' => 'rsi', 'Rhsim06G0096500' => 'rsi', 'Rhsim06G0096600' => 'rsi', 'Rhsim06G0199100' => 'rsi', 'Rhsim12G0062300' => 'rsi', 'Rhsim12G0062800' => 'rsi', 'Sabra02G0118600' => 'sbr', 'Sabra04G0027300' => 'sbr', 'Sabra04G0119500' => 'sbr', 'Sabra08G0112500' => 'sbr', 'Sabra11G0036800' => 'sbr', 'Sabra11G0103800' => 'sbr', 'Sabra13G0096300' => 'sbr', 'Sabra16G0262300' => 'sbr', 'Sabra18G0091700' => 'sbr', 'Sabra19G0095400' => 'sbr', 'SalBow6G3080' => 'sbo', 'SalBow7G1157' => 'sbo', 'SalBow7G2123' => 'sbo', 'SalBow7G2285' => 'sbo', 'SalBow7G3537' => 'sbo', 'SalBow8G2947' => 'sbo', 'SalBow8G4463' => 'sbo', 'SalBow8G5466' => 'sbo', 'Sc01g0001750' => 'sci', 'Sc02g0006640' => 'sci', 'Sc02g0006670' => 'sci', 'Sc04g0008220' => 'sci', 'Sc05g0006190' => 'sci', 'Sc08g0002760' => 'sci', 'Sc17g0006170' => 'sci', 'Sc22g0002050' => 'sci', 'Sc23g0001190' => 'sci', 'Sc24g0000980' => 'sci', 'Sed0006245' => 'sed', 'Sed0007543' => 'sed', 'Sed0009411' => 'sed', 'Sed0010765' => 'sed', 'Sed0012944' => 'sed', 'Sed0014682' => 'sed', 'Sed0016174' => 'sed', 'Sed0016796' => 'sed', 'Sed0020317' => 'sed', 'Sed0021467' => 'sed', 'SEGI_01316' => 'sgi', 'SEGI_03374' => 'sgi', 'SEGI_16265' => 'sgi', 'SEGI_18569' => 'sgi', 'SEGI_20351' => 'sgi', 'SEGI_26395' => 'sgi', 'SEGI_29469' => 'sgi', 'SEGI_34771' => 'sgi', 'SEGI_36769' => 'sgi', 'SEGI_37139' => 'sgi', 'SGA_v2.0_scaffold100G29687' => 'sas', 'SGA_v2.0_scaffold118G32472' => 'sas', 'SGA_v2.0_scaffold14G07051' => 'sas', 'SGA_v2.0_scaffold183G39845' => 'sas', 'SGA_v2.0_scaffold1G00174' => 'sas', 'SGA_v2.0_scaffold22G09714' => 'sas', 'SGA_v2.0_scaffold333G48992' => 'sas', 'SGA_v2.0_scaffold46G17491' => 'sas', 'SGA_v2.0_scaffold49G18294' => 'sas', 'SGA_v2.0_scaffold63G21658' => 'sas', 'SHI01741' => 'shi', 'SHI05771' => 'shi', 'SHI18077' => 'shi', 'SHI20525' => 'shi', 'SHI20527' => 'shi', 'SHI20528' => 'shi', 'SMO172G0185' => 'smo', 'SMO198G0020' => 'smo', 'SMO351G0006' => 'smo', 'SMO356G0118' => 'smo', 'SMO358G0296' => 'smo', 'SMO367G0079' => 'smo', 'SMO367G1277' => 'smo', 'Solyc01g014220.3' => 'sly', 'Solyc01g111770.2' => 'sly', 'Solyc02g078180.3' => 'sly', 'Solyc03g006430.3' => 'sly', 'Solyc03g006456.1' => 'sly', 'Solyc03g079860.2' => 'sly', 'Solyc04g079770.3' => 'sly', 'Solyc05g007430.4' => 'sly', 'Solyc07g063150.3' => 'sly', 'Solyc08g016620.3' => 'sly', 'Solyc09g057590.3' => 'sly', 'Solyc09g057600.1' => 'sly', 'Solyc10g009050.3' => 'sly', 'Solyc11g017420.2' => 'sly', 'Sopen01g053810' => 'spe', 'Sopen02g023040' => 'spe', 'Sopen03g002440' => 'spe', 'Sopen04g033350' => 'spe', 'Sopen05g003310' => 'spe', 'Sopen07g004050' => 'spe', 'Sopen07g031340' => 'spe', 'Sopen08g006990' => 'spe', 'Sopen10g004830' => 'spe', 'Sopen11g009370' => 'spe', 'Sp1g24450' => 'spa', 'Sp1g29670' => 'spa', 'Sp1g39600' => 'spa', 'Sp2g11080' => 'spa', 'Sp2g13970' => 'spa', 'Sp4g16130' => 'spa', 'Sp6g13080' => 'spa', 'Sp7g37270' => 'spa', 'TAR371G0065' => 'tar', 'TAR376G0340' => 'tar', 'TAR376G0435' => 'tar', 'TAR381G0002' => 'tar', 'TAR381G1236' => 'tar', 'TAR624G0055' => 'tar', 'TAR624G0324' => 'tar', 'TAR624G0696' => 'tar', 'TAR624G0906' => 'tar', 'TAR625G0107' => 'tar', 'TAR626G0015' => 'tar', 'TAR626G1356' => 'tar', 'TAR627G0888' => 'tar', 'TAR628G0399' => 'tar', 'TAR628G1327' => 'tar', 'TAR629G2831' => 'tar', 'TAR629G2874' => 'tar', 'TAR633G1432' => 'tar', 'TAR633G2771' => 'tar', 'THA.LOC104803394' => 'tha', 'THA.LOC104805153' => 'tha', 'THA.LOC104806784' => 'tha', 'THA.LOC104810473' => 'tha', 'THA.LOC104813100' => 'tha', 'THA.LOC104814215' => 'tha', 'THA.LOC104815554' => 'tha', 'THA.LOC104820544' => 'tha', 'THA.LOC104824754' => 'tha', 'THA.LOC104827717' => 'tha', 'Thecc.02G031400' => 'tca', 'Thecc.02G055900' => 'tca', 'Thecc.02G350800' => 'tca', 'Thecc.06G150900' => 'tca', 'Thecc.06G186600' => 'tca', 'Thecc.07G089600' => 'tca', 'Thecc.08G020400' => 'tca', 'Thecc.08G182100' => 'tca', 'Thhalv10000873m.g' => 'esa', 'Thhalv10004185m.g' => 'esa', 'Thhalv10006981m.g' => 'esa', 'Thhalv10007204m.g' => 'esa', 'Thhalv10011374m.g' => 'esa', 'Thhalv10013482m.g' => 'esa', 'Thhalv10017801m.g' => 'esa', 'Thhalv10024983m.g' => 'esa', 'TPR.G12072' => 'tpr', 'TPR.G15769' => 'tpr', 'TPR.G16504' => 'tpr', 'TPR.G16506' => 'tpr', 'TPR.G24345' => 'tpr', 'TPR.G26666' => 'tpr', 'TPR.G27320' => 'tpr', 'TPR.G31819' => 'tpr', 'TPR.G38879' => 'tpr', 'TPR.G39015' => 'tpr', 'TPR.G8819' => 'tpr', 'TWI09G0924' => 'twi', 'TWI12G0811' => 'twi', 'TWI12G1294' => 'twi', 'TWI31G0150' => 'twi', 'TWI36G1262' => 'twi', 'TWI38G1287' => 'twi', 'TWI38G1633' => 'twi', 'TWI38G1982' => 'twi', 'TWI39G0116' => 'twi', 'TWI60G1011' => 'twi', 'TWI63G0171' => 'twi', 'TWI73G0839' => 'twi', 'TWI79G1511' => 'twi', 'unitig_0.g915' => 'ugi', 'unitig_0.g916' => 'ugi', 'unitig_21.g20219' => 'ugi', 'unitig_21.g20416' => 'ugi', 'unitig_578.g16132' => 'ugi', 'unitig_578.g16718' => 'ugi', 'unitig_62.g23481' => 'ugi', 'unitig_744.g24535' => 'ugi', 'unitig_749.g13525' => 'ugi', 'vmacro01248' => 'vma', 'vmacro02290' => 'vma', 'vmacro10946' => 'vma', 'vmacro11865' => 'vma', 'vmacro12493' => 'vma', 'vmacro17322' => 'vma', 'vmacro21599' => 'vma', 'vmacro23041' => 'vma', 'VMungo0251G0004' => 'vmu', 'VMungo0251G2639' => 'vmu', 'VMungo0251G2967' => 'vmu', 'VMungo0540G0864' => 'vmu', 'VMungo0540G1569' => 'vmu', 'VMungo0647G0317' => 'vmu', 'VMungo0720G1373' => 'vmu', 'VMungo0720G1508' => 'vmu', 'VMungo1080G0485' => 'vmu', 'VMungo1215G3177' => 'vmu', 'Zm00001eb112600' => 'zma', 'Zm00001eb120220' => 'zma', 'Zm00001eb153240' => 'zma', 'Zm00001eb168880' => 'zma', 'Zm00001eb213920' => 'zma', 'Zm00001eb228280' => 'zma', 'Zm00001eb254580' => 'zma', 'Zm00001eb272180' => 'zma', 'Zm00001eb293190' => 'zma', 'Zm00001eb322930' => 'zma', 'Zm00001eb353360' => 'zma', 'Zm00001eb353390' => 'zma', 'Zm00001eb353430' => 'zma', 'Zm00001eb353440' => 'zma', 'Zm00001eb353780' => 'zma' ), 'gf_id' => 'HOM05D000499', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000499' ), 'data_identifier' => 'HOM05D000499', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000499', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1066', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p29780' => 'bna', 'A02p33180' => 'bna', 'A03p16470' => 'bna', 'A03p66010' => 'bna', 'A04p25970' => 'bna', 'A06p01270' => 'bna', 'A06p46080' => 'bna', 'A07p11400' => 'bna', 'A08p01840' => 'bna', 'A08p08230' => 'bna', 'A08p25740' => 'bna', 'A09p32070' => 'bna', 'A09p37830' => 'bna', 'A09p42840' => 'bna', 'A09p42850' => 'bna', 'Aa31LG10G2060' => 'aar', 'Aa31LG2G7410' => 'aar', 'Aa31LG6G10200' => 'aar', 'Aa31LG6G16680' => 'aar', 'Aa31LG6G8470' => 'aar', 'Aa31LG9G12730' => 'aar', 'Aa31LG9G13680' => 'aar', 'Aa31LG9G14920' => 'aar', 'Aa31LG9G6650' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4977' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5467' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3254' => 'aag', 'Actinidia02578' => 'ach', 'Actinidia07693' => 'ach', 'Actinidia08413' => 'ach', 'Actinidia08414' => 'ach', 'Actinidia15289' => 'ach', 'Actinidia19871' => 'ach', 'Actinidia21475' => 'ach', 'Actinidia22576' => 'ach', 'Actinidia28327' => 'ach', 'Actinidia32491' => 'ach', 'Actinidia39463' => 'ach', 'Actinidia39571' => 'ach', 'Ah.01g013750' => 'amhyb', 'Ah.01g023210' => 'amhyb', 'Ah.04g164850' => 'amhyb', 'Ah.05g178060' => 'amhyb', 'Ah.07g204270' => 'amhyb', 'Ah.07g208480' => 'amhyb', 'Ah.09g237410' => 'amhyb', 'Ah.14g089460' => 'amhyb', 'AL1G41790' => 'aly', 'AL1G49050' => 'aly', 'AL1G53810' => 'aly', 'AL1G61400' => 'aly', 'AL4G18580' => 'aly', 'AL5G12510' => 'aly', 'AL5G12540' => 'aly', 'AL6G43230' => 'aly', 'AL7G10370' => 'aly', 'AL7G19250' => 'aly', 'AL8G12240' => 'aly', 'AL8G18540' => 'aly', 'Aqoxy1G02409' => 'aox', 'Aqoxy2G03993' => 'aox', 'Aqoxy3G03357' => 'aox', 'Aqoxy4G00785' => 'aox', 'Aqoxy5G02598' => 'aox', 'Aqoxy6G00132' => 'aox', 'Aqoxy7G01776' => 'aox', 'Aqoxy7G02316' => 'aox', 'Aqoxy7G03973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.12AFKW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B8730' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27IQR1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3F75VG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3RE0GA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41TCQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.527VTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FIR39' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5W8UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DA38EV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ63HS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H1I32C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HC27T5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4M8AP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7N3CZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9UVDZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LS1NQA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT1D4B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SKC4TM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCFV76' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF9Q1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQWD9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1ZM88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WE07RT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YCK7VH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJE6Q6' => 'arhy', 'AT1G28240' => 'ath', 'AT1G34550' => 'ath', 'AT1G53040' => 'ath', 'AT2G02910' => 'ath', 'AT4G09630' => 'ath', 'AT4G38500' => 'ath', 'AT5G42660' => 'ath', 'AT5G46220' => 'ath', 'ATR0152G026' => 'atr', 'ATR0564G343' => 'atr', 'ATR0706G151' => 'atr', 'ATR0733G207' => 'atr', 'ATR0751G234' => 'atr', 'ATR0807G048' => 'atr', 'ATR1091G084' => 'atr', 'Atru.chr10.1229' => 'acertr', 'Atru.chr10.1230' => 'acertr', 'Atru.chr10.1874' => 'acertr', 'Atru.chr11.1808' => 'acertr', 'Atru.chr13.1795' => 'acertr', 'Atru.chr13.570' => 'acertr', 'Atru.chr2.2608' => 'acertr', 'Atru.chr2.2609' => 'acertr', 'Atru.chr5.3428' => 'acertr', 'Atru.chr8.1171' => 'acertr', 'AUR62004651' => 'cqu', 'AUR62008675' => 'cqu', 'AUR62010014' => 'cqu', 'AUR62013004' => 'cqu', 'AUR62014825' => 'cqu', 'AUR62015015' => 'cqu', 'AUR62015151' => 'cqu', 'AUR62017020' => 'cqu', 'AUR62019422' => 'cqu', 'AUR62023570' => 'cqu', 'AUR62025571' => 'cqu', 'AUR62029098' => 'cqu', 'AUR62033863' => 'cqu', 'AUR62034296' => 'cqu', 'AUR62040075' => 'cqu', 'BcaB02g07334' => 'bca', 'BcaB02g10575' => 'bca', 'BcaB03g12119' => 'bca', 'BcaB03g12120' => 'bca', 'BcaB03g13945' => 'bca', 'BcaB04g17123' => 'bca', 'BcaB04g17867' => 'bca', 'BcaB04g19839' => 'bca', 'BcaB07g30317' => 'bca', 'BcaB07g32432' => 'bca', 'BcaB07g33362' => 'bca', 'BcaB08g36611' => 'bca', 'BcaC01g00028' => 'bca', 'BcaC01g01356' => 'bca', 'BcaC01g02034' => 'bca', 'BcaC01g06051' => 'bca', 'BcaC03g16839' => 'bca', 'BcaC03g17176' => 'bca', 'BcaC05g26829' => 'bca', 'BcaC06g31490' => 'bca', 'BcaC06g35344' => 'bca', 'BcaC06g36570' => 'bca', 'BcaC07g37537' => 'bca', 'BcaC08g43491' => 'bca', 'BcaC08g43773' => 'bca', 'BcaNung00234' => 'bca', 'BcaNung01982' => 'bca', 'BcaNung03707' => 'bca', 'BcaNung06454' => 'bca', 'BolC2t10762H' => 'bol', 'BolC2t11191H' => 'bol', 'BolC3t14322H' => 'bol', 'BolC3t19747H' => 'bol', 'BolC3t21425H' => 'bol', 'BolC4t27800H' => 'bol', 'BolC5t31423H' => 'bol', 'BolC6t35951H' => 'bol', 'BolC6t36282H' => 'bol', 'BolC7t40678H' => 'bol', 'BolC7t40679H' => 'bol', 'BolC7t42222H' => 'bol', 'BolC7t43492H' => 'bol', 'BolC7t46785H' => 'bol', 'BolC8t47853H' => 'bol', 'BolC9t56805H' => 'bol', 'BraA02t08000Z' => 'bra', 'BraA02t08341Z' => 'bra', 'BraA03t10936Z' => 'bra', 'BraA03t15657Z' => 'bra', 'BraA04t18100Z' => 'bra', 'BraA05t20523Z' => 'bra', 'BraA06t23353Z' => 'bra', 'BraA06t27473Z' => 'bra', 'BraA06t27769Z' => 'bra', 'BraA07t28928Z' => 'bra', 'BraA08t32236Z' => 'bra', 'BraA08t32841Z' => 'bra', 'BraA08t34524Z' => 'bra', 'BraA09t38742Z' => 'bra', 'BraA09t39295Z' => 'bra', 'C02p47180' => 'bna', 'C02p50990' => 'bna', 'C03p19360' => 'bna', 'C03p74950' => 'bna', 'C03p91000' => 'bna', 'C04p63260' => 'bna', 'C05p27050' => 'bna', 'C06p08750' => 'bna', 'C06p11490' => 'bna', 'C07p02820' => 'bna', 'C07p17180' => 'bna', 'C07p29440' => 'bna', 'C07p63730' => 'bna', 'C09p39260' => 'bna', 'CAN.G1164.34' => 'can', 'CAN.G1164.39' => 'can', 'CAN.G1530.3' => 'can', 'CAN.G162.61' => 'can', 'CAN.G176.6' => 'can', 'CAN.G289.49' => 'can', 'CAN.G370.21' => 'can', 'CAN.G370.22' => 'can', 'CAN.G371.117' => 'can', 'CAN.G58.37' => 'can', 'CAN.G588.98' => 'can', 'CANSAT21G2266' => 'cansat', 'CANSAT25G2799' => 'cansat', 'CANSAT35G0862' => 'cansat', 'CANSAT35G1704' => 'cansat', 'CANSAT35G1760' => 'cansat', 'CANSAT56G3971' => 'cansat', 'CANSAT56G4116' => 'cansat', 'CANSAT80G1259' => 'cansat', 'CARHR027730' => 'chi', 'CARHR033880' => 'chi', 'CARHR043270' => 'chi', 'CARHR145330' => 'chi', 'CARHR145340' => 'chi', 'CARHR175570' => 'chi', 'CARHR181570' => 'chi', 'CARHR258470' => 'chi', 'CARHR260490' => 'chi', 'CARHR294220' => 'chi', 'Carub.0001s2668' => 'cru', 'Carub.0001s3257' => 'cru', 'Carub.0001s4220' => 'cru', 'Carub.0005s0179' => 'cru', 'Carub.0006s2807' => 'cru', 'Carub.0007s0039' => 'cru', 'Carub.0008s0169' => 'cru', 'Carub.0008s0636' => 'cru', 'Ca_00338_v3' => 'car', 'Ca_00542_v3' => 'car', 'Ca_01844_v3' => 'car', 'Ca_10611_v3' => 'car', 'Ca_13326_v3' => 'car', 'Ca_17944_v3' => 'car', 'Ca_18546_v3' => 'car', 'Ca_24219_v3' => 'car', 'Ca_29972_v3' => 'car', 'CBR_g3681' => 'cbr', 'CBR_g40021' => 'cbr', 'Cc01_g08140' => 'ccan', 'Cc02_g13410' => 'ccan', 'Cc02_g37480' => 'ccan', 'Cc05_g12030' => 'ccan', 'Cc09_g03370' => 'ccan', 'Cc09_g10300' => 'ccan', 'Cc10_g03530' => 'ccan', 'Cc10_g11380' => 'ccan', 'CDE01G0176' => 'cde', 'CDE02G0675' => 'cde', 'CDE02G0942' => 'cde', 'CDE02G1153' => 'cde', 'CDE02G4177' => 'cde', 'CDE04G2117' => 'cde', 'CDE04G2736' => 'cde', 'CDE08G1161' => 'cde', 'CDE09G1238' => 'cde', 'Cfa000467' => 'cfa', 'Cfa000947' => 'cfa', 'Cfa004969' => 'cfa', 'Cfa005284' => 'cfa', 'Cfa008993' => 'cfa', 'Cfa018187' => 'cfa', 'Cfa018454' => 'cfa', 'Cfa020585' => 'cfa', 'Ciclev10000424m.g' => 'ccl', 'Ciclev10003605m.g' => 'ccl', 'Ciclev10007828m.g' => 'ccl', 'Ciclev10014620m.g' => 'ccl', 'Ciclev10015169m.g' => 'ccl', 'Ciclev10018291m.g' => 'ccl', 'Ciclev10028256m.g' => 'ccl', 'Ciclev10033822m.g' => 'ccl', 'CiPaw.05G060300' => 'cil', 'CiPaw.05G085000' => 'cil', 'CiPaw.06G083700' => 'cil', 'CiPaw.06G120300' => 'cil', 'CiPaw.09G060500' => 'cil', 'CiPaw.09G123800' => 'cil', 'CiPaw.11G169700' => 'cil', 'CiPaw.12G118300' => 'cil', 'CiPaw.15G071000' => 'cil', 'CiPaw.15G081900' => 'cil', 'ClCG01G024610' => 'cla', 'ClCG03G006070' => 'cla', 'ClCG05G019250' => 'cla', 'ClCG09G009500' => 'cla', 'ClCG11G008200' => 'cla', 'ClCG11G018080' => 'cla', 'COL.COLO4_17373' => 'col', 'COL.COLO4_22994' => 'col', 'COL.COLO4_26389' => 'col', 'COL.COLO4_27170' => 'col', 'COL.COLO4_31074' => 'col', 'COL.COLO4_31465' => 'col', 'COL.COLO4_36438' => 'col', 'COL.COLO4_36439' => 'col', 'Cpa.g.c38781' => 'cpa', 'Cpa.g.sc128.12' => 'cpa', 'Cpa.g.sc166.7' => 'cpa', 'Cpa.g.sc166.8' => 'cpa', 'Cpa.g.sc20.111' => 'cpa', 'Cpa.g.sc27.31' => 'cpa', 'Cpa.g.sc64.36' => 'cpa', 'Cpa.g.sc64.37' => 'cpa', 'Cpa.g.sc66.49' => 'cpa', 'Cpa.g.sc80.64' => 'cpa', 'CsaV3_1G012320' => 'csa', 'CsaV3_2G008480' => 'csa', 'CsaV3_2G033450' => 'csa', 'CsaV3_3G044830' => 'csa', 'CsaV3_4G033710' => 'csa', 'CsaV3_6G051730' => 'csa', 'CsaV3_7G025350' => 'csa', 'CSS0001067' => 'camsi', 'CSS0005996' => 'camsi', 'CSS0006590' => 'camsi', 'CSS0009673' => 'camsi', 'CSS0010201' => 'camsi', 'CSS0010549' => 'camsi', 'CSS0011364' => 'camsi', 'CSS0014473' => 'camsi', 'CSS0014961' => 'camsi', 'CSS0020191' => 'camsi', 'CSS0021165' => 'camsi', 'CSS0022306' => 'camsi', 'CSS0030591' => 'camsi', 'CSS0030696' => 'camsi', 'CSS0032653' => 'camsi', 'CSS0037487' => 'camsi', 'CSS0041102' => 'camsi', 'CSS0041261' => 'camsi', 'CSS0046246' => 'camsi', 'CSS0049256' => 'camsi', 'DCAR_004075' => 'dca', 'DCAR_011538' => 'dca', 'DCAR_019553' => 'dca', 'DCAR_020952' => 'dca', 'DCAR_021739' => 'dca', 'DCAR_027407' => 'dca', 'DCAR_027913' => 'dca', 'DCAR_028066' => 'dca', 'Dinv05899' => 'din', 'Dinv07563' => 'din', 'Dinv08010' => 'din', 'Dinv14125' => 'din', 'Dinv20172' => 'din', 'Dinv30743' => 'din', 'Dinv31229' => 'din', 'Dinv34162' => 'din', 'Dinv36028' => 'din', 'Dinv39368' => 'din', 'Dinv40565' => 'din', 'Dinv41706' => 'din', 'Duzib052G0089' => 'dzi', 'Duzib116G0641' => 'dzi', 'Duzib132G0069' => 'dzi', 'Duzib132G1219' => 'dzi', 'Duzib147G0278' => 'dzi', 'Duzib160G0480' => 'dzi', 'Duzib170G0661' => 'dzi', 'Duzib177G0591' => 'dzi', 'Duzib187G1353' => 'dzi', 'Duzib192G0858' => 'dzi', 'Duzib192G0883' => 'dzi', 'Duzib213G0506' => 'dzi', 'Duzib235G0289' => 'dzi', 'Duzib251G0422' => 'dzi', 'ECA232G3898' => 'eca', 'ECA233G5950' => 'eca', 'ECA234G1699' => 'eca', 'ECA234G2421' => 'eca', 'ECA236G0426' => 'eca', 'ECA236G4331' => 'eca', 'ECA248G2573' => 'eca', 'EL10Ac1g00077' => 'bvu', 'EL10Ac1g01746' => 'bvu', 'EL10Ac2g03464' => 'bvu', 'EL10Ac4g08176' => 'bvu', 'EL10Ac7g17521' => 'bvu', 'EL10Ac8g20386' => 'bvu', 'EL10Ac9g21343' => 'bvu', 'EL10Ac9g22688' => 'bvu', 'Eucgr.B03434' => 'egr', 'Eucgr.D00618' => 'egr', 'Eucgr.E02395' => 'egr', 'Eucgr.F01129' => 'egr', 'Eucgr.F02622' => 'egr', 'Eucgr.F04207' => 'egr', 'FAN01G0570' => 'fan', 'FAN03G3351' => 'fan', 'FAN06G3702' => 'fan', 'FAN07G2149' => 'fan', 'FAN10G3758' => 'fan', 'FAN11G1170' => 'fan', 'FAN11G2050' => 'fan', 'FAN11G2724' => 'fan', 'FAN12G1700' => 'fan', 'FAN12G2028' => 'fan', 'FAN15G1160' => 'fan', 'FAN15G3063' => 'fan', 'FAN16G2540' => 'fan', 'FAN16G3077' => 'fan', 'FAN16G3624' => 'fan', 'FAN17G0221' => 'fan', 'FAN20G2492' => 'fan', 'FAN20G2905' => 'fan', 'FAN21G0548' => 'fan', 'FAN21G1300' => 'fan', 'FAN22G0077' => 'fan', 'FAN22G1315' => 'fan', 'FAN24G1280' => 'fan', 'FAN24G1445' => 'fan', 'FAN24G3527' => 'fan', 'FAN25G0464' => 'fan', 'FAN25G2885' => 'fan', 'FAN25G3270' => 'fan', 'FAN27G1101' => 'fan', 'FAN27G2846' => 'fan', 'FAN27G3524' => 'fan', 'FvH4_2g11770' => 'fve', 'FvH4_2g15630' => 'fve', 'FvH4_3g05570' => 'fve', 'FvH4_3g09110' => 'fve', 'FvH4_3g19940' => 'fve', 'FvH4_4g04821' => 'fve', 'FvH4_4g31480' => 'fve', 'FvH4_7g01740' => 'fve', 'Glyma.05G130400' => 'gma', 'Glyma.05G156400' => 'gma', 'Glyma.07G197000' => 'gma', 'Glyma.08G085151' => 'gma', 'Glyma.08G114500' => 'gma', 'Glyma.08G300400' => 'gma', 'Glyma.10G215800' => 'gma', 'Glyma.12G224400' => 'gma', 'Glyma.13G179300' => 'gma', 'Glyma.13G218151' => 'gma', 'Glyma.13G238800' => 'gma', 'Glyma.13G276900' => 'gma', 'Glyma.14G078200' => 'gma', 'Glyma.15G074500' => 'gma', 'Glyma.15G094100' => 'gma', 'Glyma.17G247200' => 'gma', 'Glyma.18G120100' => 'gma', 'Glyma.20G176000' => 'gma', 'Gohir.A01G063600' => 'ghi', 'Gohir.A01G170301' => 'ghi', 'Gohir.A02G060500' => 'ghi', 'Gohir.A05G133850' => 'ghi', 'Gohir.A05G161400' => 'ghi', 'Gohir.A06G012900' => 'ghi', 'Gohir.A06G035901' => 'ghi', 'Gohir.A06G127100' => 'ghi', 'Gohir.A06G210500' => 'ghi', 'Gohir.A08G008650' => 'ghi', 'Gohir.A09G072700' => 'ghi', 'Gohir.A09G088301' => 'ghi', 'Gohir.A10G040600' => 'ghi', 'Gohir.A12G036300' => 'ghi', 'Gohir.A12G143350' => 'ghi', 'Gohir.A12G165500' => 'ghi', 'Gohir.A13G145700' => 'ghi', 'Gohir.D01G050000' => 'ghi', 'Gohir.D01G051366' => 'ghi', 'Gohir.D01G161350' => 'ghi', 'Gohir.D02G065900' => 'ghi', 'Gohir.D05G164200' => 'ghi', 'Gohir.D05G355500' => 'ghi', 'Gohir.D06G010400' => 'ghi', 'Gohir.D06G111250' => 'ghi', 'Gohir.D06G132000' => 'ghi', 'Gohir.D06G210500' => 'ghi', 'Gohir.D07G165675' => 'ghi', 'Gohir.D08G062240' => 'ghi', 'Gohir.D08G086101' => 'ghi', 'Gohir.D08G138060' => 'ghi', 'Gohir.D09G072300' => 'ghi', 'Gohir.D10G041400' => 'ghi', 'Gohir.D11G191020' => 'ghi', 'Gohir.D11G212066' => 'ghi', 'Gohir.D12G036300' => 'ghi', 'Gohir.D12G168600' => 'ghi', 'Gohir.D13G150600' => 'ghi', 'Gorai.001G057300' => 'gra', 'Gorai.002G069900' => 'gra', 'Gorai.002G200000' => 'gra', 'Gorai.003G067600' => 'gra', 'Gorai.005G074800' => 'gra', 'Gorai.006G087300' => 'gra', 'Gorai.008G037500' => 'gra', 'Gorai.008G181400' => 'gra', 'Gorai.009G169400' => 'gra', 'Gorai.009G387900' => 'gra', 'Gorai.010G013300' => 'gra', 'Gorai.010G153800' => 'gra', 'Gorai.010G255800' => 'gra', 'Gorai.011G043700' => 'gra', 'Gorai.011G198900' => 'gra', 'Gorai.013G168400' => 'gra', 'GSVIVG01005212001' => 'vvi', 'GSVIVG01006163001' => 'vvi', 'GSVIVG01009625001' => 'vvi', 'GSVIVG01014338001' => 'vvi', 'GSVIVG01020005001' => 'vvi', 'GSVIVG01021450001' => 'vvi', 'GSVIVG01023975001' => 'vvi', 'GSVIVG01034490001' => 'vvi', 'HanXRQChr04g0112071' => 'han', 'HanXRQChr05g0131151' => 'han', 'HanXRQChr09g0262371' => 'han', 'HanXRQChr09g0268401' => 'han', 'HanXRQChr10g0279241' => 'han', 'HanXRQChr10g0297961' => 'han', 'HanXRQChr11g0326231' => 'han', 'HanXRQChr11g0328471' => 'han', 'HanXRQChr16g0507941' => 'han', 'HanXRQChr17g0560211' => 'han', 'Haze_02108' => 'cav', 'Haze_02428' => 'cav', 'Haze_05593' => 'cav', 'Haze_06448' => 'cav', 'Haze_09427' => 'cav', 'Haze_12022' => 'cav', 'Haze_17612' => 'cav', 'Haze_17928' => 'cav', 'Hma1.2p1_0032F.1_g019250' => 'hma', 'Hma1.2p1_0163F.1_g072690' => 'hma', 'Hma1.2p1_0265F.1_g106710' => 'hma', 'Hma1.2p1_0286F.1_g113970' => 'hma', 'Hma1.2p1_0363F.1_g136640' => 'hma', 'Hma1.2p1_0584F.1_g183470' => 'hma', 'Hma1.2p1_0885F.1_g232570' => 'hma', 'HPP92_006022' => 'vpl', 'HPP92_007320' => 'vpl', 'HPP92_011521' => 'vpl', 'HPP92_019387' => 'vpl', 'HPP92_024038' => 'vpl', 'Hund05891' => 'sun', 'Hund06450' => 'sun', 'Hund12053' => 'sun', 'Hund16800' => 'sun', 'Hund21222' => 'sun', 'Hund22896' => 'sun', 'Hund23746' => 'sun', 'Hund27083' => 'sun', 'Lalb_Chr02g0141831' => 'lal', 'Lalb_Chr02g0141841' => 'lal', 'Lalb_Chr05g0220411' => 'lal', 'Lalb_Chr06g0162081' => 'lal', 'Lalb_Chr09g0327651' => 'lal', 'Lalb_Chr13g0295051' => 'lal', 'Lalb_Chr15g0086801' => 'lal', 'Lalb_Chr16g0383781' => 'lal', 'Lalb_Chr16g0383791' => 'lal', 'Lalb_Chr18g0055441' => 'lal', 'Lalb_Chr18g0059611' => 'lal', 'Lalb_Chr20g0109661' => 'lal', 'Lalb_Chr20g0109831' => 'lal', 'Lalb_Chr20g0121871' => 'lal', 'Lalb_Chr22g0355361' => 'lal', 'Lalb_Chr25g0286371' => 'lal', 'Lj1A1187G43' => 'lonja', 'Lj1A1205T50' => 'lonja', 'Lj1A800G33' => 'lonja', 'Lj1C1187T7' => 'lonja', 'Lj1C843T11' => 'lonja', 'Lj1g0010940' => 'lja', 'Lj2A288T69' => 'lonja', 'Lj3g0024276' => 'lja', 'Lj4A47T76' => 'lonja', 'Lj4g0005805' => 'lja', 'Lj4g0006097' => 'lja', 'Lj4g0008528' => 'lja', 'Lj4g0024907' => 'lja', 'Lj5g0012472' => 'lja', 'Lj5g0018648' => 'lja', 'Lj6C789G1' => 'lonja', 'Lj6g0004000' => 'lja', 'Lj7A292G67' => 'lonja', 'Lj7A292T64' => 'lonja', 'Lj9A400T58' => 'lonja', 'Lsat_1_v5_gn_1_126181' => 'lsa', 'Lsat_1_v5_gn_4_123041' => 'lsa', 'Lsat_1_v5_gn_4_133620' => 'lsa', 'Lsat_1_v5_gn_4_53221' => 'lsa', 'Lsat_1_v5_gn_4_71961' => 'lsa', 'Lsat_1_v5_gn_7_105241' => 'lsa', 'Lsat_1_v5_gn_7_21361' => 'lsa', 'Lsat_1_v5_gn_7_28860' => 'lsa', 'Lsat_1_v5_gn_7_31260' => 'lsa', 'Lsat_1_v5_gn_8_52801' => 'lsa', 'Manes.02G191400' => 'mes', 'Manes.03G110100' => 'mes', 'Manes.04G071100' => 'mes', 'Manes.05G100500' => 'mes', 'Manes.05G164700' => 'mes', 'Manes.15G087000' => 'mes', 'Manes.15G121500' => 'mes', 'Manes.16G028300' => 'mes', 'Manes.17G046100' => 'mes', 'Manes.17G069800' => 'mes', 'Manes.18G100500' => 'mes', 'Mapoly0002s0109' => 'mpo', 'Mapoly0024s0007' => 'mpo', 'Mapoly0089s0032' => 'mpo', 'MBI04_g42241_MAGBIO' => 'mbi', 'MBI05_g11988_MAGBIO' => 'mbi', 'MBI05_g35452_MAGBIO' => 'mbi', 'MBI07_g30179_MAGBIO' => 'mbi', 'MBI07_g35859_MAGBIO' => 'mbi', 'MBI07_g35860_MAGBIO' => 'mbi', 'MBI07_g37166_MAGBIO' => 'mbi', 'MBI08_g18172_MAGBIO' => 'mbi', 'MBI09_g08441_MAGBIO' => 'mbi', 'MBI13_g01676_MAGBIO' => 'mbi', 'MBI14_g42955_MAGBIO' => 'mbi', 'MBI16_g13161_MAGBIO' => 'mbi', 'MBI17_g27204_MAGBIO' => 'mbi', 'MBI19_g21595_MAGBIO' => 'mbi', 'MD00G1148400' => 'mdo', 'MD02G1301200' => 'mdo', 'MD03G1227800' => 'mdo', 'MD05G1041100' => 'mdo', 'MD05G1124800' => 'mdo', 'MD05G1284000' => 'mdo', 'MD05G1338800' => 'mdo', 'MD05G1338900' => 'mdo', 'MD07G1022800' => 'mdo', 'MD10G1047500' => 'mdo', 'MD10G1127500' => 'mdo', 'MD10G1262300' => 'mdo', 'MD10G1293800' => 'mdo', 'MD16G1074300' => 'mdo', 'Medtr1g021670' => 'mtr', 'Medtr1g096320' => 'mtr', 'Medtr2g013690' => 'mtr', 'Medtr2g019450' => 'mtr', 'Medtr2g085170' => 'mtr', 'Medtr4g088785' => 'mtr', 'Medtr8g055930' => 'mtr', 'Medtr8g085850' => 'mtr', 'MELO3C002605.2' => 'cme', 'MELO3C003891.2' => 'cme', 'MELO3C004012.2' => 'cme', 'MELO3C007134.2' => 'cme', 'MELO3C008118.2' => 'cme', 'MELO3C016700.2' => 'cme', 'MELO3C024127.2' => 'cme', 'MELO3C033361.2' => 'cme', 'MELO3C033362.2' => 'cme', 'Migut.C00430' => 'egut', 'Migut.C01246' => 'egut', 'Migut.E00101' => 'egut', 'Migut.H01486' => 'egut', 'Migut.H01939' => 'egut', 'Migut.K00360' => 'egut', 'Migut.M00910' => 'egut', 'Migut.M01139' => 'egut', 'Migut.N02677' => 'egut', 'MSTRG.13252' => 'ama', 'MSTRG.14701' => 'ama', 'MSTRG.1521' => 'ama', 'MSTRG.15884' => 'ama', 'MSTRG.16242' => 'ama', 'MSTRG.22285' => 'ama', 'MSTRG.22444' => 'ama', 'MSTRG.2349' => 'ama', 'MSTRG.26308' => 'ama', 'MSTRG.28296' => 'ama', 'MSTRG.9895' => 'ama', 'Nitab4.5_0000110g0060' => 'nta', 'Nitab4.5_0000420g0130' => 'nta', 'Nitab4.5_0000422g0030' => 'nta', 'Nitab4.5_0000560g0180' => 'nta', 'Nitab4.5_0000703g0100' => 'nta', 'Nitab4.5_0000786g0200' => 'nta', 'Nitab4.5_0001336g0020' => 'nta', 'Nitab4.5_0001796g0030' => 'nta', 'Nitab4.5_0003348g0060' => 'nta', 'Nitab4.5_0003698g0040' => 'nta', 'Nitab4.5_0003942g0090' => 'nta', 'Nitab4.5_0004775g0070' => 'nta', 'Nitab4.5_0004864g0030' => 'nta', 'Nitab4.5_0005615g0020' => 'nta', 'Nitab4.5_0009288g0030' => 'nta', 'Nitab4.5_0009341g0010' => 'nta', 'Nitab4.5_0009535g0010' => 'nta', 'Nn1g03995' => 'nnu', 'Nn1g04100' => 'nnu', 'Nn1g06530' => 'nnu', 'Nn3g16404' => 'nnu', 'Nn3g17212' => 'nnu', 'Nn3g20776' => 'nnu', 'Nn3g21923' => 'nnu', 'Nn5g27737' => 'nnu', 'Nn5g29461' => 'nnu', 'Nn7g38355' => 'nnu', 'Nn8g39873' => 'nnu', 'Oeu000548.2' => 'oeu', 'Oeu004672.1' => 'oeu', 'Oeu015605.2' => 'oeu', 'Oeu016092.1' => 'oeu', 'Oeu017879.3' => 'oeu', 'Oeu024910.1' => 'oeu', 'Oeu028965.1' => 'oeu', 'Oeu031269.1' => 'oeu', 'Oeu031270.1' => 'oeu', 'Oeu032535.1' => 'oeu', 'Oeu034151.1' => 'oeu', 'Oeu034152.1' => 'oeu', 'Oeu034588.2' => 'oeu', 'Oeu050846.1' => 'oeu', 'Oeu050849.2' => 'oeu', 'Oeu051063.2' => 'oeu', 'Oeu052368.1' => 'oeu', 'Oeu052370.1' => 'oeu', 'Os01g0210400' => 'osa', 'Os01g0304300' => 'osa', 'Os01g0749100' => 'osa', 'Os02g0745800' => 'osa', 'Os03g0769050' => 'osa', 'Os05g0531500' => 'osa', 'Os06g0724300' => 'osa', 'Os11g0198100' => 'osa', 'Peaxi162Scf00069g01425' => 'pax', 'Peaxi162Scf00280g00811' => 'pax', 'Peaxi162Scf00310g00615' => 'pax', 'Peaxi162Scf00362g00542' => 'pax', 'Peaxi162Scf00461g00310' => 'pax', 'Peaxi162Scf00530g00118' => 'pax', 'Peaxi162Scf00541g00057' => 'pax', 'Peaxi162Scf00661g00017' => 'pax', 'Peaxi162Scf00926g00027' => 'pax', 'Peaxi162Scf01064g00263' => 'pax', 'Peaxi162Scf01211g00135' => 'pax', 'PGR004G2336' => 'pgr', 'PGR042G0327' => 'pgr', 'PGR042G1957' => 'pgr', 'PGR042G2003' => 'pgr', 'PGR042G3929' => 'pgr', 'PGR083G1137' => 'pgr', 'PGR083G1364' => 'pgr', 'PGSC0003DMG400003381' => 'stu', 'PGSC0003DMG400003417' => 'stu', 'PGSC0003DMG400008981' => 'stu', 'PGSC0003DMG400012417' => 'stu', 'PGSC0003DMG400012823' => 'stu', 'PGSC0003DMG400016885' => 'stu', 'PGSC0003DMG400022812' => 'stu', 'PGSC0003DMG400029726' => 'stu', 'PGSC0003DMG401009243' => 'stu', 'PGSC0003DMG401031505' => 'stu', 'PGSC0003DMG402031505' => 'stu', 'Phvul.001G017600' => 'pvu', 'Phvul.002G193500' => 'pvu', 'Phvul.002G228900' => 'pvu', 'Phvul.002G236800' => 'pvu', 'Phvul.003G049500' => 'pvu', 'Phvul.005G072000' => 'pvu', 'Phvul.006G164800' => 'pvu', 'Phvul.006G185100' => 'pvu', 'Phvul.007G090000' => 'pvu', 'Potri.001G399800' => 'ptr', 'Potri.002G149900' => 'ptr', 'Potri.004G044100' => 'ptr', 'Potri.004G177600' => 'ptr', 'Potri.009G138000' => 'ptr', 'Potri.010G094000' => 'ptr', 'Potri.011G053000' => 'ptr', 'Potri.011G119300' => 'ptr', 'Potri.013G113700' => 'ptr', 'Potri.018G107800' => 'ptr', 'Potri.019G084100' => 'ptr', 'Pp3c14_23720' => 'ppa', 'Pp3c16_6340' => 'ppa', 'Pp3c23_13420' => 'ppa', 'Pp3c24_2740' => 'ppa', 'Pp3c25_860' => 'ppa', 'Pp3c8_21750' => 'ppa', 'Prupe.1G273000' => 'ppe', 'Prupe.1G273700' => 'ppe', 'Prupe.1G274100' => 'ppe', 'Prupe.2G023300' => 'ppe', 'Prupe.4G048000' => 'ppe', 'Prupe.4G080400' => 'ppe', 'Prupe.4G181200' => 'ppe', 'Prupe.8G056900' => 'ppe', 'Prupe.8G168700' => 'ppe', 'Psat1g189080' => 'psa', 'Psat1g204760' => 'psa', 'Psat4g175560' => 'psa', 'Psat4g177720' => 'psa', 'Psat5g244240' => 'psa', 'Psat6g010720' => 'psa', 'Psat6g187200' => 'psa', 'Psat7g072040' => 'psa', 'PSO017G3501' => 'pso', 'PSO063G2148' => 'pso', 'PSO063G5608' => 'pso', 'PSO210G6392' => 'pso', 'PSO541G2319' => 'pso', 'PSO541G2836' => 'pso', 'PSO541G4012' => 'pso', 'PSO541G6253' => 'pso', 'PSO675G0580' => 'pso', 'PSO675G0856' => 'pso', 'PSO675G5635' => 'pso', 'PSO675G9157' => 'pso', 'PSO832G1660' => 'pso', 'PSO832G1969' => 'pso', 'QL02p007186' => 'qlo', 'QL02p033904' => 'qlo', 'QL03p064391' => 'qlo', 'QL05p040593' => 'qlo', 'QL05p058242' => 'qlo', 'QL08p021825' => 'qlo', 'QL11p004981' => 'qlo', 'RcHm_v2.0_Chr1g0318301' => 'rch', 'RcHm_v2.0_Chr4g0418501' => 'rch', 'RcHm_v2.0_Chr4g0439971' => 'rch', 'RcHm_v2.0_Chr5g0008541' => 'rch', 'RcHm_v2.0_Chr5g0014101' => 'rch', 'RcHm_v2.0_Chr5g0014131' => 'rch', 'RcHm_v2.0_Chr5g0033621' => 'rch', 'RcHm_v2.0_Chr6g0272041' => 'rch', 'RcHm_v2.0_Chr6g0278831' => 'rch', 'Rhsim02G0130400' => 'rsi', 'Rhsim02G0171100' => 'rsi', 'Rhsim05G0053000' => 'rsi', 'Rhsim05G0053100' => 'rsi', 'Rhsim06G0096500' => 'rsi', 'Rhsim06G0096600' => 'rsi', 'Rhsim06G0199100' => 'rsi', 'Rhsim12G0062300' => 'rsi', 'Rhsim12G0062800' => 'rsi', 'Sabra02G0118600' => 'sbr', 'Sabra04G0027300' => 'sbr', 'Sabra04G0119500' => 'sbr', 'Sabra08G0112500' => 'sbr', 'Sabra11G0036800' => 'sbr', 'Sabra11G0103800' => 'sbr', 'Sabra13G0096300' => 'sbr', 'Sabra16G0262300' => 'sbr', 'Sabra18G0091700' => 'sbr', 'Sabra19G0095400' => 'sbr', 'SalBow6G3080' => 'sbo', 'SalBow7G1157' => 'sbo', 'SalBow7G2123' => 'sbo', 'SalBow7G2285' => 'sbo', 'SalBow7G3537' => 'sbo', 'SalBow8G2947' => 'sbo', 'SalBow8G4463' => 'sbo', 'SalBow8G5466' => 'sbo', 'Sc01g0001750' => 'sci', 'Sc02g0006640' => 'sci', 'Sc02g0006670' => 'sci', 'Sc04g0008220' => 'sci', 'Sc05g0006190' => 'sci', 'Sc08g0002760' => 'sci', 'Sc17g0006170' => 'sci', 'Sc22g0002050' => 'sci', 'Sc23g0001190' => 'sci', 'Sc24g0000980' => 'sci', 'Sed0006245' => 'sed', 'Sed0007543' => 'sed', 'Sed0009411' => 'sed', 'Sed0010765' => 'sed', 'Sed0012944' => 'sed', 'Sed0014682' => 'sed', 'Sed0016174' => 'sed', 'Sed0016796' => 'sed', 'Sed0020317' => 'sed', 'Sed0021467' => 'sed', 'SEGI_01316' => 'sgi', 'SEGI_03374' => 'sgi', 'SEGI_16265' => 'sgi', 'SEGI_18569' => 'sgi', 'SEGI_20351' => 'sgi', 'SEGI_26395' => 'sgi', 'SEGI_29469' => 'sgi', 'SEGI_34771' => 'sgi', 'SEGI_36769' => 'sgi', 'SEGI_37139' => 'sgi', 'SGA_v2.0_scaffold100G29687' => 'sas', 'SGA_v2.0_scaffold118G32472' => 'sas', 'SGA_v2.0_scaffold14G07051' => 'sas', 'SGA_v2.0_scaffold183G39845' => 'sas', 'SGA_v2.0_scaffold1G00174' => 'sas', 'SGA_v2.0_scaffold22G09714' => 'sas', 'SGA_v2.0_scaffold333G48992' => 'sas', 'SGA_v2.0_scaffold46G17491' => 'sas', 'SGA_v2.0_scaffold49G18294' => 'sas', 'SGA_v2.0_scaffold63G21658' => 'sas', 'SHI01741' => 'shi', 'SHI05771' => 'shi', 'SHI18077' => 'shi', 'SHI20525' => 'shi', 'SHI20527' => 'shi', 'SHI20528' => 'shi', 'SMO172G0185' => 'smo', 'SMO198G0020' => 'smo', 'SMO351G0006' => 'smo', 'SMO356G0118' => 'smo', 'SMO358G0296' => 'smo', 'SMO367G0079' => 'smo', 'SMO367G1277' => 'smo', 'Solyc01g014220.3' => 'sly', 'Solyc01g111770.2' => 'sly', 'Solyc02g078180.3' => 'sly', 'Solyc03g006430.3' => 'sly', 'Solyc03g006456.1' => 'sly', 'Solyc03g079860.2' => 'sly', 'Solyc04g079770.3' => 'sly', 'Solyc05g007430.4' => 'sly', 'Solyc07g063150.3' => 'sly', 'Solyc08g016620.3' => 'sly', 'Solyc09g057590.3' => 'sly', 'Solyc09g057600.1' => 'sly', 'Solyc10g009050.3' => 'sly', 'Solyc11g017420.2' => 'sly', 'Sopen01g053810' => 'spe', 'Sopen02g023040' => 'spe', 'Sopen03g002440' => 'spe', 'Sopen04g033350' => 'spe', 'Sopen05g003310' => 'spe', 'Sopen07g004050' => 'spe', 'Sopen07g031340' => 'spe', 'Sopen08g006990' => 'spe', 'Sopen10g004830' => 'spe', 'Sopen11g009370' => 'spe', 'Sp1g24450' => 'spa', 'Sp1g29670' => 'spa', 'Sp1g39600' => 'spa', 'Sp2g11080' => 'spa', 'Sp2g13970' => 'spa', 'Sp4g16130' => 'spa', 'Sp6g13080' => 'spa', 'Sp7g37270' => 'spa', 'TAR371G0065' => 'tar', 'TAR376G0340' => 'tar', 'TAR376G0435' => 'tar', 'TAR381G0002' => 'tar', 'TAR381G1236' => 'tar', 'TAR624G0055' => 'tar', 'TAR624G0324' => 'tar', 'TAR624G0696' => 'tar', 'TAR624G0906' => 'tar', 'TAR625G0107' => 'tar', 'TAR626G0015' => 'tar', 'TAR626G1356' => 'tar', 'TAR627G0888' => 'tar', 'TAR628G0399' => 'tar', 'TAR628G1327' => 'tar', 'TAR629G2831' => 'tar', 'TAR629G2874' => 'tar', 'TAR633G1432' => 'tar', 'TAR633G2771' => 'tar', 'THA.LOC104803394' => 'tha', 'THA.LOC104805153' => 'tha', 'THA.LOC104806784' => 'tha', 'THA.LOC104810473' => 'tha', 'THA.LOC104813100' => 'tha', 'THA.LOC104814215' => 'tha', 'THA.LOC104815554' => 'tha', 'THA.LOC104820544' => 'tha', 'THA.LOC104824754' => 'tha', 'THA.LOC104827717' => 'tha', 'Thecc.02G031400' => 'tca', 'Thecc.02G055900' => 'tca', 'Thecc.02G350800' => 'tca', 'Thecc.06G150900' => 'tca', 'Thecc.06G186600' => 'tca', 'Thecc.07G089600' => 'tca', 'Thecc.08G020400' => 'tca', 'Thecc.08G182100' => 'tca', 'Thhalv10000873m.g' => 'esa', 'Thhalv10004185m.g' => 'esa', 'Thhalv10006981m.g' => 'esa', 'Thhalv10007204m.g' => 'esa', 'Thhalv10011374m.g' => 'esa', 'Thhalv10013482m.g' => 'esa', 'Thhalv10017801m.g' => 'esa', 'Thhalv10024983m.g' => 'esa', 'TPR.G12072' => 'tpr', 'TPR.G15769' => 'tpr', 'TPR.G16504' => 'tpr', 'TPR.G16506' => 'tpr', 'TPR.G24345' => 'tpr', 'TPR.G26666' => 'tpr', 'TPR.G27320' => 'tpr', 'TPR.G31819' => 'tpr', 'TPR.G38879' => 'tpr', 'TPR.G39015' => 'tpr', 'TPR.G8819' => 'tpr', 'TWI09G0924' => 'twi', 'TWI12G0811' => 'twi', 'TWI12G1294' => 'twi', 'TWI31G0150' => 'twi', 'TWI36G1262' => 'twi', 'TWI38G1287' => 'twi', 'TWI38G1633' => 'twi', 'TWI38G1982' => 'twi', 'TWI39G0116' => 'twi', 'TWI60G1011' => 'twi', 'TWI63G0171' => 'twi', 'TWI73G0839' => 'twi', 'TWI79G1511' => 'twi', 'unitig_0.g915' => 'ugi', 'unitig_0.g916' => 'ugi', 'unitig_21.g20219' => 'ugi', 'unitig_21.g20416' => 'ugi', 'unitig_578.g16132' => 'ugi', 'unitig_578.g16718' => 'ugi', 'unitig_62.g23481' => 'ugi', 'unitig_744.g24535' => 'ugi', 'unitig_749.g13525' => 'ugi', 'vmacro01248' => 'vma', 'vmacro02290' => 'vma', 'vmacro10946' => 'vma', 'vmacro11865' => 'vma', 'vmacro12493' => 'vma', 'vmacro17322' => 'vma', 'vmacro21599' => 'vma', 'vmacro23041' => 'vma', 'VMungo0251G0004' => 'vmu', 'VMungo0251G2639' => 'vmu', 'VMungo0251G2967' => 'vmu', 'VMungo0540G0864' => 'vmu', 'VMungo0540G1569' => 'vmu', 'VMungo0647G0317' => 'vmu', 'VMungo0720G1373' => 'vmu', 'VMungo0720G1508' => 'vmu', 'VMungo1080G0485' => 'vmu', 'VMungo1215G3177' => 'vmu', 'Zm00001eb112600' => 'zma', 'Zm00001eb120220' => 'zma', 'Zm00001eb153240' => 'zma', 'Zm00001eb168880' => 'zma', 'Zm00001eb213920' => 'zma', 'Zm00001eb228280' => 'zma', 'Zm00001eb254580' => 'zma', 'Zm00001eb272180' => 'zma', 'Zm00001eb293190' => 'zma', 'Zm00001eb322930' => 'zma', 'Zm00001eb353360' => 'zma', 'Zm00001eb353390' => 'zma', 'Zm00001eb353430' => 'zma', 'Zm00001eb353440' => 'zma', 'Zm00001eb353780' => 'zma' ) $gf_id = 'HOM05D000499' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000499' ) $data_identifier = 'HOM05D000499' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 29, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 12, 'amhyb' => (int) 8, 'aly' => (int) 12, 'aox' => (int) 9, 'arhy' => (int) 26, 'ath' => (int) 8, 'atr' => (int) 7, 'acertr' => (int) 10, 'cqu' => (int) 15, 'bca' => (int) 29, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 11, 'cansat' => (int) 8, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 9, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 8, 'cpa' => (int) 10, 'csa' => (int) 7, 'camsi' => (int) 20, 'dca' => (int) 8, 'din' => (int) 12, 'dzi' => (int) 14, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 6, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 38, 'gra' => (int) 16, 'vvi' => (int) 8, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 5, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 11, 'lja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 11, 'mpo' => (int) 3, 'mbi' => (int) 14, 'mdo' => (int) 14, 'mtr' => (int) 8, 'cme' => (int) 9, 'egut' => (int) 9, 'ama' => (int) 11, 'nta' => (int) 17, 'nnu' => (int) 11, 'oeu' => (int) 18, 'osa' => (int) 8, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 6, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 9, 'rsi' => (int) 9, 'sbr' => (int) 10, 'sbo' => (int) 8, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 10, 'sas' => (int) 10, 'shi' => (int) 6, 'smo' => (int) 7, 'sly' => (int) 14, 'spe' => (int) 10, 'spa' => (int) 8, 'tar' => (int) 19, 'tha' => (int) 10, 'tca' => (int) 8, 'esa' => (int) 8, 'tpr' => (int) 11, 'twi' => (int) 13, 'ugi' => (int) 9, 'vma' => (int) 8, 'vmu' => (int) 10, 'zma' => (int) 15 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb353780' $species_info = array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ) $local_species = 'lal' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000499', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1066', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p29780' => 'bna', 'A02p33180' => 'bna', 'A03p16470' => 'bna', 'A03p66010' => 'bna', 'A04p25970' => 'bna', 'A06p01270' => 'bna', 'A06p46080' => 'bna', 'A07p11400' => 'bna', 'A08p01840' => 'bna', 'A08p08230' => 'bna', 'A08p25740' => 'bna', 'A09p32070' => 'bna', 'A09p37830' => 'bna', 'A09p42840' => 'bna', 'A09p42850' => 'bna', 'Aa31LG10G2060' => 'aar', 'Aa31LG2G7410' => 'aar', 'Aa31LG6G10200' => 'aar', 'Aa31LG6G16680' => 'aar', 'Aa31LG6G8470' => 'aar', 'Aa31LG9G12730' => 'aar', 'Aa31LG9G13680' => 'aar', 'Aa31LG9G14920' => 'aar', 'Aa31LG9G6650' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4977' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5467' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3254' => 'aag', 'Actinidia02578' => 'ach', 'Actinidia07693' => 'ach', 'Actinidia08413' => 'ach', 'Actinidia08414' => 'ach', 'Actinidia15289' => 'ach', 'Actinidia19871' => 'ach', 'Actinidia21475' => 'ach', 'Actinidia22576' => 'ach', 'Actinidia28327' => 'ach', 'Actinidia32491' => 'ach', 'Actinidia39463' => 'ach', 'Actinidia39571' => 'ach', 'Ah.01g013750' => 'amhyb', 'Ah.01g023210' => 'amhyb', 'Ah.04g164850' => 'amhyb', 'Ah.05g178060' => 'amhyb', 'Ah.07g204270' => 'amhyb', 'Ah.07g208480' => 'amhyb', 'Ah.09g237410' => 'amhyb', 'Ah.14g089460' => 'amhyb', 'AL1G41790' => 'aly', 'AL1G49050' => 'aly', 'AL1G53810' => 'aly', 'AL1G61400' => 'aly', 'AL4G18580' => 'aly', 'AL5G12510' => 'aly', 'AL5G12540' => 'aly', 'AL6G43230' => 'aly', 'AL7G10370' => 'aly', 'AL7G19250' => 'aly', 'AL8G12240' => 'aly', 'AL8G18540' => 'aly', 'Aqoxy1G02409' => 'aox', 'Aqoxy2G03993' => 'aox', 'Aqoxy3G03357' => 'aox', 'Aqoxy4G00785' => 'aox', 'Aqoxy5G02598' => 'aox', 'Aqoxy6G00132' => 'aox', 'Aqoxy7G01776' => 'aox', 'Aqoxy7G02316' => 'aox', 'Aqoxy7G03973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.12AFKW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B8730' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27IQR1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3F75VG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3RE0GA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41TCQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.527VTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FIR39' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5W8UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DA38EV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ63HS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H1I32C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HC27T5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4M8AP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7N3CZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9UVDZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LS1NQA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT1D4B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SKC4TM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCFV76' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF9Q1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQWD9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1ZM88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WE07RT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YCK7VH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJE6Q6' => 'arhy', 'AT1G28240' => 'ath', 'AT1G34550' => 'ath', 'AT1G53040' => 'ath', 'AT2G02910' => 'ath', 'AT4G09630' => 'ath', 'AT4G38500' => 'ath', 'AT5G42660' => 'ath', 'AT5G46220' => 'ath', 'ATR0152G026' => 'atr', 'ATR0564G343' => 'atr', 'ATR0706G151' => 'atr', 'ATR0733G207' => 'atr', 'ATR0751G234' => 'atr', 'ATR0807G048' => 'atr', 'ATR1091G084' => 'atr', 'Atru.chr10.1229' => 'acertr', 'Atru.chr10.1230' => 'acertr', 'Atru.chr10.1874' => 'acertr', 'Atru.chr11.1808' => 'acertr', 'Atru.chr13.1795' => 'acertr', 'Atru.chr13.570' => 'acertr', 'Atru.chr2.2608' => 'acertr', 'Atru.chr2.2609' => 'acertr', 'Atru.chr5.3428' => 'acertr', 'Atru.chr8.1171' => 'acertr', 'AUR62004651' => 'cqu', 'AUR62008675' => 'cqu', 'AUR62010014' => 'cqu', 'AUR62013004' => 'cqu', 'AUR62014825' => 'cqu', 'AUR62015015' => 'cqu', 'AUR62015151' => 'cqu', 'AUR62017020' => 'cqu', 'AUR62019422' => 'cqu', 'AUR62023570' => 'cqu', 'AUR62025571' => 'cqu', 'AUR62029098' => 'cqu', 'AUR62033863' => 'cqu', 'AUR62034296' => 'cqu', 'AUR62040075' => 'cqu', 'BcaB02g07334' => 'bca', 'BcaB02g10575' => 'bca', 'BcaB03g12119' => 'bca', 'BcaB03g12120' => 'bca', 'BcaB03g13945' => 'bca', 'BcaB04g17123' => 'bca', 'BcaB04g17867' => 'bca', 'BcaB04g19839' => 'bca', 'BcaB07g30317' => 'bca', 'BcaB07g32432' => 'bca', 'BcaB07g33362' => 'bca', 'BcaB08g36611' => 'bca', 'BcaC01g00028' => 'bca', 'BcaC01g01356' => 'bca', 'BcaC01g02034' => 'bca', 'BcaC01g06051' => 'bca', 'BcaC03g16839' => 'bca', 'BcaC03g17176' => 'bca', 'BcaC05g26829' => 'bca', 'BcaC06g31490' => 'bca', 'BcaC06g35344' => 'bca', 'BcaC06g36570' => 'bca', 'BcaC07g37537' => 'bca', 'BcaC08g43491' => 'bca', 'BcaC08g43773' => 'bca', 'BcaNung00234' => 'bca', 'BcaNung01982' => 'bca', 'BcaNung03707' => 'bca', 'BcaNung06454' => 'bca', 'BolC2t10762H' => 'bol', 'BolC2t11191H' => 'bol', 'BolC3t14322H' => 'bol', 'BolC3t19747H' => 'bol', 'BolC3t21425H' => 'bol', 'BolC4t27800H' => 'bol', 'BolC5t31423H' => 'bol', 'BolC6t35951H' => 'bol', 'BolC6t36282H' => 'bol', 'BolC7t40678H' => 'bol', 'BolC7t40679H' => 'bol', 'BolC7t42222H' => 'bol', 'BolC7t43492H' => 'bol', 'BolC7t46785H' => 'bol', 'BolC8t47853H' => 'bol', 'BolC9t56805H' => 'bol', 'BraA02t08000Z' => 'bra', 'BraA02t08341Z' => 'bra', 'BraA03t10936Z' => 'bra', 'BraA03t15657Z' => 'bra', 'BraA04t18100Z' => 'bra', 'BraA05t20523Z' => 'bra', 'BraA06t23353Z' => 'bra', 'BraA06t27473Z' => 'bra', 'BraA06t27769Z' => 'bra', 'BraA07t28928Z' => 'bra', 'BraA08t32236Z' => 'bra', 'BraA08t32841Z' => 'bra', 'BraA08t34524Z' => 'bra', 'BraA09t38742Z' => 'bra', 'BraA09t39295Z' => 'bra', 'C02p47180' => 'bna', 'C02p50990' => 'bna', 'C03p19360' => 'bna', 'C03p74950' => 'bna', 'C03p91000' => 'bna', 'C04p63260' => 'bna', 'C05p27050' => 'bna', 'C06p08750' => 'bna', 'C06p11490' => 'bna', 'C07p02820' => 'bna', 'C07p17180' => 'bna', 'C07p29440' => 'bna', 'C07p63730' => 'bna', 'C09p39260' => 'bna', 'CAN.G1164.34' => 'can', 'CAN.G1164.39' => 'can', 'CAN.G1530.3' => 'can', 'CAN.G162.61' => 'can', 'CAN.G176.6' => 'can', 'CAN.G289.49' => 'can', 'CAN.G370.21' => 'can', 'CAN.G370.22' => 'can', 'CAN.G371.117' => 'can', 'CAN.G58.37' => 'can', 'CAN.G588.98' => 'can', 'CANSAT21G2266' => 'cansat', 'CANSAT25G2799' => 'cansat', 'CANSAT35G0862' => 'cansat', 'CANSAT35G1704' => 'cansat', 'CANSAT35G1760' => 'cansat', 'CANSAT56G3971' => 'cansat', 'CANSAT56G4116' => 'cansat', 'CANSAT80G1259' => 'cansat', 'CARHR027730' => 'chi', 'CARHR033880' => 'chi', 'CARHR043270' => 'chi', 'CARHR145330' => 'chi', 'CARHR145340' => 'chi', 'CARHR175570' => 'chi', 'CARHR181570' => 'chi', 'CARHR258470' => 'chi', 'CARHR260490' => 'chi', 'CARHR294220' => 'chi', 'Carub.0001s2668' => 'cru', 'Carub.0001s3257' => 'cru', 'Carub.0001s4220' => 'cru', 'Carub.0005s0179' => 'cru', 'Carub.0006s2807' => 'cru', 'Carub.0007s0039' => 'cru', 'Carub.0008s0169' => 'cru', 'Carub.0008s0636' => 'cru', 'Ca_00338_v3' => 'car', 'Ca_00542_v3' => 'car', 'Ca_01844_v3' => 'car', 'Ca_10611_v3' => 'car', 'Ca_13326_v3' => 'car', 'Ca_17944_v3' => 'car', 'Ca_18546_v3' => 'car', 'Ca_24219_v3' => 'car', 'Ca_29972_v3' => 'car', 'CBR_g3681' => 'cbr', 'CBR_g40021' => 'cbr', 'Cc01_g08140' => 'ccan', 'Cc02_g13410' => 'ccan', 'Cc02_g37480' => 'ccan', 'Cc05_g12030' => 'ccan', 'Cc09_g03370' => 'ccan', 'Cc09_g10300' => 'ccan', 'Cc10_g03530' => 'ccan', 'Cc10_g11380' => 'ccan', 'CDE01G0176' => 'cde', 'CDE02G0675' => 'cde', 'CDE02G0942' => 'cde', 'CDE02G1153' => 'cde', 'CDE02G4177' => 'cde', 'CDE04G2117' => 'cde', 'CDE04G2736' => 'cde', 'CDE08G1161' => 'cde', 'CDE09G1238' => 'cde', 'Cfa000467' => 'cfa', 'Cfa000947' => 'cfa', 'Cfa004969' => 'cfa', 'Cfa005284' => 'cfa', 'Cfa008993' => 'cfa', 'Cfa018187' => 'cfa', 'Cfa018454' => 'cfa', 'Cfa020585' => 'cfa', 'Ciclev10000424m.g' => 'ccl', 'Ciclev10003605m.g' => 'ccl', 'Ciclev10007828m.g' => 'ccl', 'Ciclev10014620m.g' => 'ccl', 'Ciclev10015169m.g' => 'ccl', 'Ciclev10018291m.g' => 'ccl', 'Ciclev10028256m.g' => 'ccl', 'Ciclev10033822m.g' => 'ccl', 'CiPaw.05G060300' => 'cil', 'CiPaw.05G085000' => 'cil', 'CiPaw.06G083700' => 'cil', 'CiPaw.06G120300' => 'cil', 'CiPaw.09G060500' => 'cil', 'CiPaw.09G123800' => 'cil', 'CiPaw.11G169700' => 'cil', 'CiPaw.12G118300' => 'cil', 'CiPaw.15G071000' => 'cil', 'CiPaw.15G081900' => 'cil', 'ClCG01G024610' => 'cla', 'ClCG03G006070' => 'cla', 'ClCG05G019250' => 'cla', 'ClCG09G009500' => 'cla', 'ClCG11G008200' => 'cla', 'ClCG11G018080' => 'cla', 'COL.COLO4_17373' => 'col', 'COL.COLO4_22994' => 'col', 'COL.COLO4_26389' => 'col', 'COL.COLO4_27170' => 'col', 'COL.COLO4_31074' => 'col', 'COL.COLO4_31465' => 'col', 'COL.COLO4_36438' => 'col', 'COL.COLO4_36439' => 'col', 'Cpa.g.c38781' => 'cpa', 'Cpa.g.sc128.12' => 'cpa', 'Cpa.g.sc166.7' => 'cpa', 'Cpa.g.sc166.8' => 'cpa', 'Cpa.g.sc20.111' => 'cpa', 'Cpa.g.sc27.31' => 'cpa', 'Cpa.g.sc64.36' => 'cpa', 'Cpa.g.sc64.37' => 'cpa', 'Cpa.g.sc66.49' => 'cpa', 'Cpa.g.sc80.64' => 'cpa', 'CsaV3_1G012320' => 'csa', 'CsaV3_2G008480' => 'csa', 'CsaV3_2G033450' => 'csa', 'CsaV3_3G044830' => 'csa', 'CsaV3_4G033710' => 'csa', 'CsaV3_6G051730' => 'csa', 'CsaV3_7G025350' => 'csa', 'CSS0001067' => 'camsi', 'CSS0005996' => 'camsi', 'CSS0006590' => 'camsi', 'CSS0009673' => 'camsi', 'CSS0010201' => 'camsi', 'CSS0010549' => 'camsi', 'CSS0011364' => 'camsi', 'CSS0014473' => 'camsi', 'CSS0014961' => 'camsi', 'CSS0020191' => 'camsi', 'CSS0021165' => 'camsi', 'CSS0022306' => 'camsi', 'CSS0030591' => 'camsi', 'CSS0030696' => 'camsi', 'CSS0032653' => 'camsi', 'CSS0037487' => 'camsi', 'CSS0041102' => 'camsi', 'CSS0041261' => 'camsi', 'CSS0046246' => 'camsi', 'CSS0049256' => 'camsi', 'DCAR_004075' => 'dca', 'DCAR_011538' => 'dca', 'DCAR_019553' => 'dca', 'DCAR_020952' => 'dca', 'DCAR_021739' => 'dca', 'DCAR_027407' => 'dca', 'DCAR_027913' => 'dca', 'DCAR_028066' => 'dca', 'Dinv05899' => 'din', 'Dinv07563' => 'din', 'Dinv08010' => 'din', 'Dinv14125' => 'din', 'Dinv20172' => 'din', 'Dinv30743' => 'din', 'Dinv31229' => 'din', 'Dinv34162' => 'din', 'Dinv36028' => 'din', 'Dinv39368' => 'din', 'Dinv40565' => 'din', 'Dinv41706' => 'din', 'Duzib052G0089' => 'dzi', 'Duzib116G0641' => 'dzi', 'Duzib132G0069' => 'dzi', 'Duzib132G1219' => 'dzi', 'Duzib147G0278' => 'dzi', 'Duzib160G0480' => 'dzi', 'Duzib170G0661' => 'dzi', 'Duzib177G0591' => 'dzi', 'Duzib187G1353' => 'dzi', 'Duzib192G0858' => 'dzi', 'Duzib192G0883' => 'dzi', 'Duzib213G0506' => 'dzi', 'Duzib235G0289' => 'dzi', 'Duzib251G0422' => 'dzi', 'ECA232G3898' => 'eca', 'ECA233G5950' => 'eca', 'ECA234G1699' => 'eca', 'ECA234G2421' => 'eca', 'ECA236G0426' => 'eca', 'ECA236G4331' => 'eca', 'ECA248G2573' => 'eca', 'EL10Ac1g00077' => 'bvu', 'EL10Ac1g01746' => 'bvu', 'EL10Ac2g03464' => 'bvu', 'EL10Ac4g08176' => 'bvu', 'EL10Ac7g17521' => 'bvu', 'EL10Ac8g20386' => 'bvu', 'EL10Ac9g21343' => 'bvu', 'EL10Ac9g22688' => 'bvu', 'Eucgr.B03434' => 'egr', 'Eucgr.D00618' => 'egr', 'Eucgr.E02395' => 'egr', 'Eucgr.F01129' => 'egr', 'Eucgr.F02622' => 'egr', 'Eucgr.F04207' => 'egr', 'FAN01G0570' => 'fan', 'FAN03G3351' => 'fan', 'FAN06G3702' => 'fan', 'FAN07G2149' => 'fan', 'FAN10G3758' => 'fan', 'FAN11G1170' => 'fan', 'FAN11G2050' => 'fan', 'FAN11G2724' => 'fan', 'FAN12G1700' => 'fan', 'FAN12G2028' => 'fan', 'FAN15G1160' => 'fan', 'FAN15G3063' => 'fan', 'FAN16G2540' => 'fan', 'FAN16G3077' => 'fan', 'FAN16G3624' => 'fan', 'FAN17G0221' => 'fan', 'FAN20G2492' => 'fan', 'FAN20G2905' => 'fan', 'FAN21G0548' => 'fan', 'FAN21G1300' => 'fan', 'FAN22G0077' => 'fan', 'FAN22G1315' => 'fan', 'FAN24G1280' => 'fan', 'FAN24G1445' => 'fan', 'FAN24G3527' => 'fan', 'FAN25G0464' => 'fan', 'FAN25G2885' => 'fan', 'FAN25G3270' => 'fan', 'FAN27G1101' => 'fan', 'FAN27G2846' => 'fan', 'FAN27G3524' => 'fan', 'FvH4_2g11770' => 'fve', 'FvH4_2g15630' => 'fve', 'FvH4_3g05570' => 'fve', 'FvH4_3g09110' => 'fve', 'FvH4_3g19940' => 'fve', 'FvH4_4g04821' => 'fve', 'FvH4_4g31480' => 'fve', 'FvH4_7g01740' => 'fve', 'Glyma.05G130400' => 'gma', 'Glyma.05G156400' => 'gma', 'Glyma.07G197000' => 'gma', 'Glyma.08G085151' => 'gma', 'Glyma.08G114500' => 'gma', 'Glyma.08G300400' => 'gma', 'Glyma.10G215800' => 'gma', 'Glyma.12G224400' => 'gma', 'Glyma.13G179300' => 'gma', 'Glyma.13G218151' => 'gma', 'Glyma.13G238800' => 'gma', 'Glyma.13G276900' => 'gma', 'Glyma.14G078200' => 'gma', 'Glyma.15G074500' => 'gma', 'Glyma.15G094100' => 'gma', 'Glyma.17G247200' => 'gma', 'Glyma.18G120100' => 'gma', 'Glyma.20G176000' => 'gma', 'Gohir.A01G063600' => 'ghi', 'Gohir.A01G170301' => 'ghi', 'Gohir.A02G060500' => 'ghi', 'Gohir.A05G133850' => 'ghi', 'Gohir.A05G161400' => 'ghi', 'Gohir.A06G012900' => 'ghi', 'Gohir.A06G035901' => 'ghi', 'Gohir.A06G127100' => 'ghi', 'Gohir.A06G210500' => 'ghi', 'Gohir.A08G008650' => 'ghi', 'Gohir.A09G072700' => 'ghi', 'Gohir.A09G088301' => 'ghi', 'Gohir.A10G040600' => 'ghi', 'Gohir.A12G036300' => 'ghi', 'Gohir.A12G143350' => 'ghi', 'Gohir.A12G165500' => 'ghi', 'Gohir.A13G145700' => 'ghi', 'Gohir.D01G050000' => 'ghi', 'Gohir.D01G051366' => 'ghi', 'Gohir.D01G161350' => 'ghi', 'Gohir.D02G065900' => 'ghi', 'Gohir.D05G164200' => 'ghi', 'Gohir.D05G355500' => 'ghi', 'Gohir.D06G010400' => 'ghi', 'Gohir.D06G111250' => 'ghi', 'Gohir.D06G132000' => 'ghi', 'Gohir.D06G210500' => 'ghi', 'Gohir.D07G165675' => 'ghi', 'Gohir.D08G062240' => 'ghi', 'Gohir.D08G086101' => 'ghi', 'Gohir.D08G138060' => 'ghi', 'Gohir.D09G072300' => 'ghi', 'Gohir.D10G041400' => 'ghi', 'Gohir.D11G191020' => 'ghi', 'Gohir.D11G212066' => 'ghi', 'Gohir.D12G036300' => 'ghi', 'Gohir.D12G168600' => 'ghi', 'Gohir.D13G150600' => 'ghi', 'Gorai.001G057300' => 'gra', 'Gorai.002G069900' => 'gra', 'Gorai.002G200000' => 'gra', 'Gorai.003G067600' => 'gra', 'Gorai.005G074800' => 'gra', 'Gorai.006G087300' => 'gra', 'Gorai.008G037500' => 'gra', 'Gorai.008G181400' => 'gra', 'Gorai.009G169400' => 'gra', 'Gorai.009G387900' => 'gra', 'Gorai.010G013300' => 'gra', 'Gorai.010G153800' => 'gra', 'Gorai.010G255800' => 'gra', 'Gorai.011G043700' => 'gra', 'Gorai.011G198900' => 'gra', 'Gorai.013G168400' => 'gra', 'GSVIVG01005212001' => 'vvi', 'GSVIVG01006163001' => 'vvi', 'GSVIVG01009625001' => 'vvi', 'GSVIVG01014338001' => 'vvi', 'GSVIVG01020005001' => 'vvi', 'GSVIVG01021450001' => 'vvi', 'GSVIVG01023975001' => 'vvi', 'GSVIVG01034490001' => 'vvi', 'HanXRQChr04g0112071' => 'han', 'HanXRQChr05g0131151' => 'han', 'HanXRQChr09g0262371' => 'han', 'HanXRQChr09g0268401' => 'han', 'HanXRQChr10g0279241' => 'han', 'HanXRQChr10g0297961' => 'han', 'HanXRQChr11g0326231' => 'han', 'HanXRQChr11g0328471' => 'han', 'HanXRQChr16g0507941' => 'han', 'HanXRQChr17g0560211' => 'han', 'Haze_02108' => 'cav', 'Haze_02428' => 'cav', 'Haze_05593' => 'cav', 'Haze_06448' => 'cav', 'Haze_09427' => 'cav', 'Haze_12022' => 'cav', 'Haze_17612' => 'cav', 'Haze_17928' => 'cav', 'Hma1.2p1_0032F.1_g019250' => 'hma', 'Hma1.2p1_0163F.1_g072690' => 'hma', 'Hma1.2p1_0265F.1_g106710' => 'hma', 'Hma1.2p1_0286F.1_g113970' => 'hma', 'Hma1.2p1_0363F.1_g136640' => 'hma', 'Hma1.2p1_0584F.1_g183470' => 'hma', 'Hma1.2p1_0885F.1_g232570' => 'hma', 'HPP92_006022' => 'vpl', 'HPP92_007320' => 'vpl', 'HPP92_011521' => 'vpl', 'HPP92_019387' => 'vpl', 'HPP92_024038' => 'vpl', 'Hund05891' => 'sun', 'Hund06450' => 'sun', 'Hund12053' => 'sun', 'Hund16800' => 'sun', 'Hund21222' => 'sun', 'Hund22896' => 'sun', 'Hund23746' => 'sun', 'Hund27083' => 'sun', 'Lalb_Chr02g0141831' => 'lal', 'Lalb_Chr02g0141841' => 'lal', 'Lalb_Chr05g0220411' => 'lal', 'Lalb_Chr06g0162081' => 'lal', 'Lalb_Chr09g0327651' => 'lal', 'Lalb_Chr13g0295051' => 'lal', 'Lalb_Chr15g0086801' => 'lal', 'Lalb_Chr16g0383781' => 'lal', 'Lalb_Chr16g0383791' => 'lal', 'Lalb_Chr18g0055441' => 'lal', 'Lalb_Chr18g0059611' => 'lal', 'Lalb_Chr20g0109661' => 'lal', 'Lalb_Chr20g0109831' => 'lal', 'Lalb_Chr20g0121871' => 'lal', 'Lalb_Chr22g0355361' => 'lal', 'Lalb_Chr25g0286371' => 'lal', 'Lj1A1187G43' => 'lonja', 'Lj1A1205T50' => 'lonja', 'Lj1A800G33' => 'lonja', 'Lj1C1187T7' => 'lonja', 'Lj1C843T11' => 'lonja', 'Lj1g0010940' => 'lja', 'Lj2A288T69' => 'lonja', 'Lj3g0024276' => 'lja', 'Lj4A47T76' => 'lonja', 'Lj4g0005805' => 'lja', 'Lj4g0006097' => 'lja', 'Lj4g0008528' => 'lja', 'Lj4g0024907' => 'lja', 'Lj5g0012472' => 'lja', 'Lj5g0018648' => 'lja', 'Lj6C789G1' => 'lonja', 'Lj6g0004000' => 'lja', 'Lj7A292G67' => 'lonja', 'Lj7A292T64' => 'lonja', 'Lj9A400T58' => 'lonja', 'Lsat_1_v5_gn_1_126181' => 'lsa', 'Lsat_1_v5_gn_4_123041' => 'lsa', 'Lsat_1_v5_gn_4_133620' => 'lsa', 'Lsat_1_v5_gn_4_53221' => 'lsa', 'Lsat_1_v5_gn_4_71961' => 'lsa', 'Lsat_1_v5_gn_7_105241' => 'lsa', 'Lsat_1_v5_gn_7_21361' => 'lsa', 'Lsat_1_v5_gn_7_28860' => 'lsa', 'Lsat_1_v5_gn_7_31260' => 'lsa', 'Lsat_1_v5_gn_8_52801' => 'lsa', 'Manes.02G191400' => 'mes', 'Manes.03G110100' => 'mes', 'Manes.04G071100' => 'mes', 'Manes.05G100500' => 'mes', 'Manes.05G164700' => 'mes', 'Manes.15G087000' => 'mes', 'Manes.15G121500' => 'mes', 'Manes.16G028300' => 'mes', 'Manes.17G046100' => 'mes', 'Manes.17G069800' => 'mes', 'Manes.18G100500' => 'mes', 'Mapoly0002s0109' => 'mpo', 'Mapoly0024s0007' => 'mpo', 'Mapoly0089s0032' => 'mpo', 'MBI04_g42241_MAGBIO' => 'mbi', 'MBI05_g11988_MAGBIO' => 'mbi', 'MBI05_g35452_MAGBIO' => 'mbi', 'MBI07_g30179_MAGBIO' => 'mbi', 'MBI07_g35859_MAGBIO' => 'mbi', 'MBI07_g35860_MAGBIO' => 'mbi', 'MBI07_g37166_MAGBIO' => 'mbi', 'MBI08_g18172_MAGBIO' => 'mbi', 'MBI09_g08441_MAGBIO' => 'mbi', 'MBI13_g01676_MAGBIO' => 'mbi', 'MBI14_g42955_MAGBIO' => 'mbi', 'MBI16_g13161_MAGBIO' => 'mbi', 'MBI17_g27204_MAGBIO' => 'mbi', 'MBI19_g21595_MAGBIO' => 'mbi', 'MD00G1148400' => 'mdo', 'MD02G1301200' => 'mdo', 'MD03G1227800' => 'mdo', 'MD05G1041100' => 'mdo', 'MD05G1124800' => 'mdo', 'MD05G1284000' => 'mdo', 'MD05G1338800' => 'mdo', 'MD05G1338900' => 'mdo', 'MD07G1022800' => 'mdo', 'MD10G1047500' => 'mdo', 'MD10G1127500' => 'mdo', 'MD10G1262300' => 'mdo', 'MD10G1293800' => 'mdo', 'MD16G1074300' => 'mdo', 'Medtr1g021670' => 'mtr', 'Medtr1g096320' => 'mtr', 'Medtr2g013690' => 'mtr', 'Medtr2g019450' => 'mtr', 'Medtr2g085170' => 'mtr', 'Medtr4g088785' => 'mtr', 'Medtr8g055930' => 'mtr', 'Medtr8g085850' => 'mtr', 'MELO3C002605.2' => 'cme', 'MELO3C003891.2' => 'cme', 'MELO3C004012.2' => 'cme', 'MELO3C007134.2' => 'cme', 'MELO3C008118.2' => 'cme', 'MELO3C016700.2' => 'cme', 'MELO3C024127.2' => 'cme', 'MELO3C033361.2' => 'cme', 'MELO3C033362.2' => 'cme', 'Migut.C00430' => 'egut', 'Migut.C01246' => 'egut', 'Migut.E00101' => 'egut', 'Migut.H01486' => 'egut', 'Migut.H01939' => 'egut', 'Migut.K00360' => 'egut', 'Migut.M00910' => 'egut', 'Migut.M01139' => 'egut', 'Migut.N02677' => 'egut', 'MSTRG.13252' => 'ama', 'MSTRG.14701' => 'ama', 'MSTRG.1521' => 'ama', 'MSTRG.15884' => 'ama', 'MSTRG.16242' => 'ama', 'MSTRG.22285' => 'ama', 'MSTRG.22444' => 'ama', 'MSTRG.2349' => 'ama', 'MSTRG.26308' => 'ama', 'MSTRG.28296' => 'ama', 'MSTRG.9895' => 'ama', 'Nitab4.5_0000110g0060' => 'nta', 'Nitab4.5_0000420g0130' => 'nta', 'Nitab4.5_0000422g0030' => 'nta', 'Nitab4.5_0000560g0180' => 'nta', 'Nitab4.5_0000703g0100' => 'nta', 'Nitab4.5_0000786g0200' => 'nta', 'Nitab4.5_0001336g0020' => 'nta', 'Nitab4.5_0001796g0030' => 'nta', 'Nitab4.5_0003348g0060' => 'nta', 'Nitab4.5_0003698g0040' => 'nta', 'Nitab4.5_0003942g0090' => 'nta', 'Nitab4.5_0004775g0070' => 'nta', 'Nitab4.5_0004864g0030' => 'nta', 'Nitab4.5_0005615g0020' => 'nta', 'Nitab4.5_0009288g0030' => 'nta', 'Nitab4.5_0009341g0010' => 'nta', 'Nitab4.5_0009535g0010' => 'nta', 'Nn1g03995' => 'nnu', 'Nn1g04100' => 'nnu', 'Nn1g06530' => 'nnu', 'Nn3g16404' => 'nnu', 'Nn3g17212' => 'nnu', 'Nn3g20776' => 'nnu', 'Nn3g21923' => 'nnu', 'Nn5g27737' => 'nnu', 'Nn5g29461' => 'nnu', 'Nn7g38355' => 'nnu', 'Nn8g39873' => 'nnu', 'Oeu000548.2' => 'oeu', 'Oeu004672.1' => 'oeu', 'Oeu015605.2' => 'oeu', 'Oeu016092.1' => 'oeu', 'Oeu017879.3' => 'oeu', 'Oeu024910.1' => 'oeu', 'Oeu028965.1' => 'oeu', 'Oeu031269.1' => 'oeu', 'Oeu031270.1' => 'oeu', 'Oeu032535.1' => 'oeu', 'Oeu034151.1' => 'oeu', 'Oeu034152.1' => 'oeu', 'Oeu034588.2' => 'oeu', 'Oeu050846.1' => 'oeu', 'Oeu050849.2' => 'oeu', 'Oeu051063.2' => 'oeu', 'Oeu052368.1' => 'oeu', 'Oeu052370.1' => 'oeu', 'Os01g0210400' => 'osa', 'Os01g0304300' => 'osa', 'Os01g0749100' => 'osa', 'Os02g0745800' => 'osa', 'Os03g0769050' => 'osa', 'Os05g0531500' => 'osa', 'Os06g0724300' => 'osa', 'Os11g0198100' => 'osa', 'Peaxi162Scf00069g01425' => 'pax', 'Peaxi162Scf00280g00811' => 'pax', 'Peaxi162Scf00310g00615' => 'pax', 'Peaxi162Scf00362g00542' => 'pax', 'Peaxi162Scf00461g00310' => 'pax', 'Peaxi162Scf00530g00118' => 'pax', 'Peaxi162Scf00541g00057' => 'pax', 'Peaxi162Scf00661g00017' => 'pax', 'Peaxi162Scf00926g00027' => 'pax', 'Peaxi162Scf01064g00263' => 'pax', 'Peaxi162Scf01211g00135' => 'pax', 'PGR004G2336' => 'pgr', 'PGR042G0327' => 'pgr', 'PGR042G1957' => 'pgr', 'PGR042G2003' => 'pgr', 'PGR042G3929' => 'pgr', 'PGR083G1137' => 'pgr', 'PGR083G1364' => 'pgr', 'PGSC0003DMG400003381' => 'stu', 'PGSC0003DMG400003417' => 'stu', 'PGSC0003DMG400008981' => 'stu', 'PGSC0003DMG400012417' => 'stu', 'PGSC0003DMG400012823' => 'stu', 'PGSC0003DMG400016885' => 'stu', 'PGSC0003DMG400022812' => 'stu', 'PGSC0003DMG400029726' => 'stu', 'PGSC0003DMG401009243' => 'stu', 'PGSC0003DMG401031505' => 'stu', 'PGSC0003DMG402031505' => 'stu', 'Phvul.001G017600' => 'pvu', 'Phvul.002G193500' => 'pvu', 'Phvul.002G228900' => 'pvu', 'Phvul.002G236800' => 'pvu', 'Phvul.003G049500' => 'pvu', 'Phvul.005G072000' => 'pvu', 'Phvul.006G164800' => 'pvu', 'Phvul.006G185100' => 'pvu', 'Phvul.007G090000' => 'pvu', 'Potri.001G399800' => 'ptr', 'Potri.002G149900' => 'ptr', 'Potri.004G044100' => 'ptr', 'Potri.004G177600' => 'ptr', 'Potri.009G138000' => 'ptr', 'Potri.010G094000' => 'ptr', 'Potri.011G053000' => 'ptr', 'Potri.011G119300' => 'ptr', 'Potri.013G113700' => 'ptr', 'Potri.018G107800' => 'ptr', 'Potri.019G084100' => 'ptr', 'Pp3c14_23720' => 'ppa', 'Pp3c16_6340' => 'ppa', 'Pp3c23_13420' => 'ppa', 'Pp3c24_2740' => 'ppa', 'Pp3c25_860' => 'ppa', 'Pp3c8_21750' => 'ppa', 'Prupe.1G273000' => 'ppe', 'Prupe.1G273700' => 'ppe', 'Prupe.1G274100' => 'ppe', 'Prupe.2G023300' => 'ppe', 'Prupe.4G048000' => 'ppe', 'Prupe.4G080400' => 'ppe', 'Prupe.4G181200' => 'ppe', 'Prupe.8G056900' => 'ppe', 'Prupe.8G168700' => 'ppe', 'Psat1g189080' => 'psa', 'Psat1g204760' => 'psa', 'Psat4g175560' => 'psa', 'Psat4g177720' => 'psa', 'Psat5g244240' => 'psa', 'Psat6g010720' => 'psa', 'Psat6g187200' => 'psa', 'Psat7g072040' => 'psa', 'PSO017G3501' => 'pso', 'PSO063G2148' => 'pso', 'PSO063G5608' => 'pso', 'PSO210G6392' => 'pso', 'PSO541G2319' => 'pso', 'PSO541G2836' => 'pso', 'PSO541G4012' => 'pso', 'PSO541G6253' => 'pso', 'PSO675G0580' => 'pso', 'PSO675G0856' => 'pso', 'PSO675G5635' => 'pso', 'PSO675G9157' => 'pso', 'PSO832G1660' => 'pso', 'PSO832G1969' => 'pso', 'QL02p007186' => 'qlo', 'QL02p033904' => 'qlo', 'QL03p064391' => 'qlo', 'QL05p040593' => 'qlo', 'QL05p058242' => 'qlo', 'QL08p021825' => 'qlo', 'QL11p004981' => 'qlo', 'RcHm_v2.0_Chr1g0318301' => 'rch', 'RcHm_v2.0_Chr4g0418501' => 'rch', 'RcHm_v2.0_Chr4g0439971' => 'rch', 'RcHm_v2.0_Chr5g0008541' => 'rch', 'RcHm_v2.0_Chr5g0014101' => 'rch', 'RcHm_v2.0_Chr5g0014131' => 'rch', 'RcHm_v2.0_Chr5g0033621' => 'rch', 'RcHm_v2.0_Chr6g0272041' => 'rch', 'RcHm_v2.0_Chr6g0278831' => 'rch', 'Rhsim02G0130400' => 'rsi', 'Rhsim02G0171100' => 'rsi', 'Rhsim05G0053000' => 'rsi', 'Rhsim05G0053100' => 'rsi', 'Rhsim06G0096500' => 'rsi', 'Rhsim06G0096600' => 'rsi', 'Rhsim06G0199100' => 'rsi', 'Rhsim12G0062300' => 'rsi', 'Rhsim12G0062800' => 'rsi', 'Sabra02G0118600' => 'sbr', 'Sabra04G0027300' => 'sbr', 'Sabra04G0119500' => 'sbr', 'Sabra08G0112500' => 'sbr', 'Sabra11G0036800' => 'sbr', 'Sabra11G0103800' => 'sbr', 'Sabra13G0096300' => 'sbr', 'Sabra16G0262300' => 'sbr', 'Sabra18G0091700' => 'sbr', 'Sabra19G0095400' => 'sbr', 'SalBow6G3080' => 'sbo', 'SalBow7G1157' => 'sbo', 'SalBow7G2123' => 'sbo', 'SalBow7G2285' => 'sbo', 'SalBow7G3537' => 'sbo', 'SalBow8G2947' => 'sbo', 'SalBow8G4463' => 'sbo', 'SalBow8G5466' => 'sbo', 'Sc01g0001750' => 'sci', 'Sc02g0006640' => 'sci', 'Sc02g0006670' => 'sci', 'Sc04g0008220' => 'sci', 'Sc05g0006190' => 'sci', 'Sc08g0002760' => 'sci', 'Sc17g0006170' => 'sci', 'Sc22g0002050' => 'sci', 'Sc23g0001190' => 'sci', 'Sc24g0000980' => 'sci', 'Sed0006245' => 'sed', 'Sed0007543' => 'sed', 'Sed0009411' => 'sed', 'Sed0010765' => 'sed', 'Sed0012944' => 'sed', 'Sed0014682' => 'sed', 'Sed0016174' => 'sed', 'Sed0016796' => 'sed', 'Sed0020317' => 'sed', 'Sed0021467' => 'sed', 'SEGI_01316' => 'sgi', 'SEGI_03374' => 'sgi', 'SEGI_16265' => 'sgi', 'SEGI_18569' => 'sgi', 'SEGI_20351' => 'sgi', 'SEGI_26395' => 'sgi', 'SEGI_29469' => 'sgi', 'SEGI_34771' => 'sgi', 'SEGI_36769' => 'sgi', 'SEGI_37139' => 'sgi', 'SGA_v2.0_scaffold100G29687' => 'sas', 'SGA_v2.0_scaffold118G32472' => 'sas', 'SGA_v2.0_scaffold14G07051' => 'sas', 'SGA_v2.0_scaffold183G39845' => 'sas', 'SGA_v2.0_scaffold1G00174' => 'sas', 'SGA_v2.0_scaffold22G09714' => 'sas', 'SGA_v2.0_scaffold333G48992' => 'sas', 'SGA_v2.0_scaffold46G17491' => 'sas', 'SGA_v2.0_scaffold49G18294' => 'sas', 'SGA_v2.0_scaffold63G21658' => 'sas', 'SHI01741' => 'shi', 'SHI05771' => 'shi', 'SHI18077' => 'shi', 'SHI20525' => 'shi', 'SHI20527' => 'shi', 'SHI20528' => 'shi', 'SMO172G0185' => 'smo', 'SMO198G0020' => 'smo', 'SMO351G0006' => 'smo', 'SMO356G0118' => 'smo', 'SMO358G0296' => 'smo', 'SMO367G0079' => 'smo', 'SMO367G1277' => 'smo', 'Solyc01g014220.3' => 'sly', 'Solyc01g111770.2' => 'sly', 'Solyc02g078180.3' => 'sly', 'Solyc03g006430.3' => 'sly', 'Solyc03g006456.1' => 'sly', 'Solyc03g079860.2' => 'sly', 'Solyc04g079770.3' => 'sly', 'Solyc05g007430.4' => 'sly', 'Solyc07g063150.3' => 'sly', 'Solyc08g016620.3' => 'sly', 'Solyc09g057590.3' => 'sly', 'Solyc09g057600.1' => 'sly', 'Solyc10g009050.3' => 'sly', 'Solyc11g017420.2' => 'sly', 'Sopen01g053810' => 'spe', 'Sopen02g023040' => 'spe', 'Sopen03g002440' => 'spe', 'Sopen04g033350' => 'spe', 'Sopen05g003310' => 'spe', 'Sopen07g004050' => 'spe', 'Sopen07g031340' => 'spe', 'Sopen08g006990' => 'spe', 'Sopen10g004830' => 'spe', 'Sopen11g009370' => 'spe', 'Sp1g24450' => 'spa', 'Sp1g29670' => 'spa', 'Sp1g39600' => 'spa', 'Sp2g11080' => 'spa', 'Sp2g13970' => 'spa', 'Sp4g16130' => 'spa', 'Sp6g13080' => 'spa', 'Sp7g37270' => 'spa', 'TAR371G0065' => 'tar', 'TAR376G0340' => 'tar', 'TAR376G0435' => 'tar', 'TAR381G0002' => 'tar', 'TAR381G1236' => 'tar', 'TAR624G0055' => 'tar', 'TAR624G0324' => 'tar', 'TAR624G0696' => 'tar', 'TAR624G0906' => 'tar', 'TAR625G0107' => 'tar', 'TAR626G0015' => 'tar', 'TAR626G1356' => 'tar', 'TAR627G0888' => 'tar', 'TAR628G0399' => 'tar', 'TAR628G1327' => 'tar', 'TAR629G2831' => 'tar', 'TAR629G2874' => 'tar', 'TAR633G1432' => 'tar', 'TAR633G2771' => 'tar', 'THA.LOC104803394' => 'tha', 'THA.LOC104805153' => 'tha', 'THA.LOC104806784' => 'tha', 'THA.LOC104810473' => 'tha', 'THA.LOC104813100' => 'tha', 'THA.LOC104814215' => 'tha', 'THA.LOC104815554' => 'tha', 'THA.LOC104820544' => 'tha', 'THA.LOC104824754' => 'tha', 'THA.LOC104827717' => 'tha', 'Thecc.02G031400' => 'tca', 'Thecc.02G055900' => 'tca', 'Thecc.02G350800' => 'tca', 'Thecc.06G150900' => 'tca', 'Thecc.06G186600' => 'tca', 'Thecc.07G089600' => 'tca', 'Thecc.08G020400' => 'tca', 'Thecc.08G182100' => 'tca', 'Thhalv10000873m.g' => 'esa', 'Thhalv10004185m.g' => 'esa', 'Thhalv10006981m.g' => 'esa', 'Thhalv10007204m.g' => 'esa', 'Thhalv10011374m.g' => 'esa', 'Thhalv10013482m.g' => 'esa', 'Thhalv10017801m.g' => 'esa', 'Thhalv10024983m.g' => 'esa', 'TPR.G12072' => 'tpr', 'TPR.G15769' => 'tpr', 'TPR.G16504' => 'tpr', 'TPR.G16506' => 'tpr', 'TPR.G24345' => 'tpr', 'TPR.G26666' => 'tpr', 'TPR.G27320' => 'tpr', 'TPR.G31819' => 'tpr', 'TPR.G38879' => 'tpr', 'TPR.G39015' => 'tpr', 'TPR.G8819' => 'tpr', 'TWI09G0924' => 'twi', 'TWI12G0811' => 'twi', 'TWI12G1294' => 'twi', 'TWI31G0150' => 'twi', 'TWI36G1262' => 'twi', 'TWI38G1287' => 'twi', 'TWI38G1633' => 'twi', 'TWI38G1982' => 'twi', 'TWI39G0116' => 'twi', 'TWI60G1011' => 'twi', 'TWI63G0171' => 'twi', 'TWI73G0839' => 'twi', 'TWI79G1511' => 'twi', 'unitig_0.g915' => 'ugi', 'unitig_0.g916' => 'ugi', 'unitig_21.g20219' => 'ugi', 'unitig_21.g20416' => 'ugi', 'unitig_578.g16132' => 'ugi', 'unitig_578.g16718' => 'ugi', 'unitig_62.g23481' => 'ugi', 'unitig_744.g24535' => 'ugi', 'unitig_749.g13525' => 'ugi', 'vmacro01248' => 'vma', 'vmacro02290' => 'vma', 'vmacro10946' => 'vma', 'vmacro11865' => 'vma', 'vmacro12493' => 'vma', 'vmacro17322' => 'vma', 'vmacro21599' => 'vma', 'vmacro23041' => 'vma', 'VMungo0251G0004' => 'vmu', 'VMungo0251G2639' => 'vmu', 'VMungo0251G2967' => 'vmu', 'VMungo0540G0864' => 'vmu', 'VMungo0540G1569' => 'vmu', 'VMungo0647G0317' => 'vmu', 'VMungo0720G1373' => 'vmu', 'VMungo0720G1508' => 'vmu', 'VMungo1080G0485' => 'vmu', 'VMungo1215G3177' => 'vmu', 'Zm00001eb112600' => 'zma', 'Zm00001eb120220' => 'zma', 'Zm00001eb153240' => 'zma', 'Zm00001eb168880' => 'zma', 'Zm00001eb213920' => 'zma', 'Zm00001eb228280' => 'zma', 'Zm00001eb254580' => 'zma', 'Zm00001eb272180' => 'zma', 'Zm00001eb293190' => 'zma', 'Zm00001eb322930' => 'zma', 'Zm00001eb353360' => 'zma', 'Zm00001eb353390' => 'zma', 'Zm00001eb353430' => 'zma', 'Zm00001eb353440' => 'zma', 'Zm00001eb353780' => 'zma' ), 'gf_id' => 'HOM05D000499', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000499' ), 'data_identifier' => 'HOM05D000499', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000499', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1066', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p29780' => 'bna', 'A02p33180' => 'bna', 'A03p16470' => 'bna', 'A03p66010' => 'bna', 'A04p25970' => 'bna', 'A06p01270' => 'bna', 'A06p46080' => 'bna', 'A07p11400' => 'bna', 'A08p01840' => 'bna', 'A08p08230' => 'bna', 'A08p25740' => 'bna', 'A09p32070' => 'bna', 'A09p37830' => 'bna', 'A09p42840' => 'bna', 'A09p42850' => 'bna', 'Aa31LG10G2060' => 'aar', 'Aa31LG2G7410' => 'aar', 'Aa31LG6G10200' => 'aar', 'Aa31LG6G16680' => 'aar', 'Aa31LG6G8470' => 'aar', 'Aa31LG9G12730' => 'aar', 'Aa31LG9G13680' => 'aar', 'Aa31LG9G14920' => 'aar', 'Aa31LG9G6650' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4977' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5467' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3254' => 'aag', 'Actinidia02578' => 'ach', 'Actinidia07693' => 'ach', 'Actinidia08413' => 'ach', 'Actinidia08414' => 'ach', 'Actinidia15289' => 'ach', 'Actinidia19871' => 'ach', 'Actinidia21475' => 'ach', 'Actinidia22576' => 'ach', 'Actinidia28327' => 'ach', 'Actinidia32491' => 'ach', 'Actinidia39463' => 'ach', 'Actinidia39571' => 'ach', 'Ah.01g013750' => 'amhyb', 'Ah.01g023210' => 'amhyb', 'Ah.04g164850' => 'amhyb', 'Ah.05g178060' => 'amhyb', 'Ah.07g204270' => 'amhyb', 'Ah.07g208480' => 'amhyb', 'Ah.09g237410' => 'amhyb', 'Ah.14g089460' => 'amhyb', 'AL1G41790' => 'aly', 'AL1G49050' => 'aly', 'AL1G53810' => 'aly', 'AL1G61400' => 'aly', 'AL4G18580' => 'aly', 'AL5G12510' => 'aly', 'AL5G12540' => 'aly', 'AL6G43230' => 'aly', 'AL7G10370' => 'aly', 'AL7G19250' => 'aly', 'AL8G12240' => 'aly', 'AL8G18540' => 'aly', 'Aqoxy1G02409' => 'aox', 'Aqoxy2G03993' => 'aox', 'Aqoxy3G03357' => 'aox', 'Aqoxy4G00785' => 'aox', 'Aqoxy5G02598' => 'aox', 'Aqoxy6G00132' => 'aox', 'Aqoxy7G01776' => 'aox', 'Aqoxy7G02316' => 'aox', 'Aqoxy7G03973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.12AFKW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B8730' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27IQR1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3F75VG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3RE0GA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41TCQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.527VTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FIR39' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5W8UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DA38EV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ63HS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H1I32C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HC27T5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4M8AP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7N3CZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9UVDZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LS1NQA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT1D4B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SKC4TM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCFV76' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF9Q1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQWD9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1ZM88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WE07RT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YCK7VH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJE6Q6' => 'arhy', 'AT1G28240' => 'ath', 'AT1G34550' => 'ath', 'AT1G53040' => 'ath', 'AT2G02910' => 'ath', 'AT4G09630' => 'ath', 'AT4G38500' => 'ath', 'AT5G42660' => 'ath', 'AT5G46220' => 'ath', 'ATR0152G026' => 'atr', 'ATR0564G343' => 'atr', 'ATR0706G151' => 'atr', 'ATR0733G207' => 'atr', 'ATR0751G234' => 'atr', 'ATR0807G048' => 'atr', 'ATR1091G084' => 'atr', 'Atru.chr10.1229' => 'acertr', 'Atru.chr10.1230' => 'acertr', 'Atru.chr10.1874' => 'acertr', 'Atru.chr11.1808' => 'acertr', 'Atru.chr13.1795' => 'acertr', 'Atru.chr13.570' => 'acertr', 'Atru.chr2.2608' => 'acertr', 'Atru.chr2.2609' => 'acertr', 'Atru.chr5.3428' => 'acertr', 'Atru.chr8.1171' => 'acertr', 'AUR62004651' => 'cqu', 'AUR62008675' => 'cqu', 'AUR62010014' => 'cqu', 'AUR62013004' => 'cqu', 'AUR62014825' => 'cqu', 'AUR62015015' => 'cqu', 'AUR62015151' => 'cqu', 'AUR62017020' => 'cqu', 'AUR62019422' => 'cqu', 'AUR62023570' => 'cqu', 'AUR62025571' => 'cqu', 'AUR62029098' => 'cqu', 'AUR62033863' => 'cqu', 'AUR62034296' => 'cqu', 'AUR62040075' => 'cqu', 'BcaB02g07334' => 'bca', 'BcaB02g10575' => 'bca', 'BcaB03g12119' => 'bca', 'BcaB03g12120' => 'bca', 'BcaB03g13945' => 'bca', 'BcaB04g17123' => 'bca', 'BcaB04g17867' => 'bca', 'BcaB04g19839' => 'bca', 'BcaB07g30317' => 'bca', 'BcaB07g32432' => 'bca', 'BcaB07g33362' => 'bca', 'BcaB08g36611' => 'bca', 'BcaC01g00028' => 'bca', 'BcaC01g01356' => 'bca', 'BcaC01g02034' => 'bca', 'BcaC01g06051' => 'bca', 'BcaC03g16839' => 'bca', 'BcaC03g17176' => 'bca', 'BcaC05g26829' => 'bca', 'BcaC06g31490' => 'bca', 'BcaC06g35344' => 'bca', 'BcaC06g36570' => 'bca', 'BcaC07g37537' => 'bca', 'BcaC08g43491' => 'bca', 'BcaC08g43773' => 'bca', 'BcaNung00234' => 'bca', 'BcaNung01982' => 'bca', 'BcaNung03707' => 'bca', 'BcaNung06454' => 'bca', 'BolC2t10762H' => 'bol', 'BolC2t11191H' => 'bol', 'BolC3t14322H' => 'bol', 'BolC3t19747H' => 'bol', 'BolC3t21425H' => 'bol', 'BolC4t27800H' => 'bol', 'BolC5t31423H' => 'bol', 'BolC6t35951H' => 'bol', 'BolC6t36282H' => 'bol', 'BolC7t40678H' => 'bol', 'BolC7t40679H' => 'bol', 'BolC7t42222H' => 'bol', 'BolC7t43492H' => 'bol', 'BolC7t46785H' => 'bol', 'BolC8t47853H' => 'bol', 'BolC9t56805H' => 'bol', 'BraA02t08000Z' => 'bra', 'BraA02t08341Z' => 'bra', 'BraA03t10936Z' => 'bra', 'BraA03t15657Z' => 'bra', 'BraA04t18100Z' => 'bra', 'BraA05t20523Z' => 'bra', 'BraA06t23353Z' => 'bra', 'BraA06t27473Z' => 'bra', 'BraA06t27769Z' => 'bra', 'BraA07t28928Z' => 'bra', 'BraA08t32236Z' => 'bra', 'BraA08t32841Z' => 'bra', 'BraA08t34524Z' => 'bra', 'BraA09t38742Z' => 'bra', 'BraA09t39295Z' => 'bra', 'C02p47180' => 'bna', 'C02p50990' => 'bna', 'C03p19360' => 'bna', 'C03p74950' => 'bna', 'C03p91000' => 'bna', 'C04p63260' => 'bna', 'C05p27050' => 'bna', 'C06p08750' => 'bna', 'C06p11490' => 'bna', 'C07p02820' => 'bna', 'C07p17180' => 'bna', 'C07p29440' => 'bna', 'C07p63730' => 'bna', 'C09p39260' => 'bna', 'CAN.G1164.34' => 'can', 'CAN.G1164.39' => 'can', 'CAN.G1530.3' => 'can', 'CAN.G162.61' => 'can', 'CAN.G176.6' => 'can', 'CAN.G289.49' => 'can', 'CAN.G370.21' => 'can', 'CAN.G370.22' => 'can', 'CAN.G371.117' => 'can', 'CAN.G58.37' => 'can', 'CAN.G588.98' => 'can', 'CANSAT21G2266' => 'cansat', 'CANSAT25G2799' => 'cansat', 'CANSAT35G0862' => 'cansat', 'CANSAT35G1704' => 'cansat', 'CANSAT35G1760' => 'cansat', 'CANSAT56G3971' => 'cansat', 'CANSAT56G4116' => 'cansat', 'CANSAT80G1259' => 'cansat', 'CARHR027730' => 'chi', 'CARHR033880' => 'chi', 'CARHR043270' => 'chi', 'CARHR145330' => 'chi', 'CARHR145340' => 'chi', 'CARHR175570' => 'chi', 'CARHR181570' => 'chi', 'CARHR258470' => 'chi', 'CARHR260490' => 'chi', 'CARHR294220' => 'chi', 'Carub.0001s2668' => 'cru', 'Carub.0001s3257' => 'cru', 'Carub.0001s4220' => 'cru', 'Carub.0005s0179' => 'cru', 'Carub.0006s2807' => 'cru', 'Carub.0007s0039' => 'cru', 'Carub.0008s0169' => 'cru', 'Carub.0008s0636' => 'cru', 'Ca_00338_v3' => 'car', 'Ca_00542_v3' => 'car', 'Ca_01844_v3' => 'car', 'Ca_10611_v3' => 'car', 'Ca_13326_v3' => 'car', 'Ca_17944_v3' => 'car', 'Ca_18546_v3' => 'car', 'Ca_24219_v3' => 'car', 'Ca_29972_v3' => 'car', 'CBR_g3681' => 'cbr', 'CBR_g40021' => 'cbr', 'Cc01_g08140' => 'ccan', 'Cc02_g13410' => 'ccan', 'Cc02_g37480' => 'ccan', 'Cc05_g12030' => 'ccan', 'Cc09_g03370' => 'ccan', 'Cc09_g10300' => 'ccan', 'Cc10_g03530' => 'ccan', 'Cc10_g11380' => 'ccan', 'CDE01G0176' => 'cde', 'CDE02G0675' => 'cde', 'CDE02G0942' => 'cde', 'CDE02G1153' => 'cde', 'CDE02G4177' => 'cde', 'CDE04G2117' => 'cde', 'CDE04G2736' => 'cde', 'CDE08G1161' => 'cde', 'CDE09G1238' => 'cde', 'Cfa000467' => 'cfa', 'Cfa000947' => 'cfa', 'Cfa004969' => 'cfa', 'Cfa005284' => 'cfa', 'Cfa008993' => 'cfa', 'Cfa018187' => 'cfa', 'Cfa018454' => 'cfa', 'Cfa020585' => 'cfa', 'Ciclev10000424m.g' => 'ccl', 'Ciclev10003605m.g' => 'ccl', 'Ciclev10007828m.g' => 'ccl', 'Ciclev10014620m.g' => 'ccl', 'Ciclev10015169m.g' => 'ccl', 'Ciclev10018291m.g' => 'ccl', 'Ciclev10028256m.g' => 'ccl', 'Ciclev10033822m.g' => 'ccl', 'CiPaw.05G060300' => 'cil', 'CiPaw.05G085000' => 'cil', 'CiPaw.06G083700' => 'cil', 'CiPaw.06G120300' => 'cil', 'CiPaw.09G060500' => 'cil', 'CiPaw.09G123800' => 'cil', 'CiPaw.11G169700' => 'cil', 'CiPaw.12G118300' => 'cil', 'CiPaw.15G071000' => 'cil', 'CiPaw.15G081900' => 'cil', 'ClCG01G024610' => 'cla', 'ClCG03G006070' => 'cla', 'ClCG05G019250' => 'cla', 'ClCG09G009500' => 'cla', 'ClCG11G008200' => 'cla', 'ClCG11G018080' => 'cla', 'COL.COLO4_17373' => 'col', 'COL.COLO4_22994' => 'col', 'COL.COLO4_26389' => 'col', 'COL.COLO4_27170' => 'col', 'COL.COLO4_31074' => 'col', 'COL.COLO4_31465' => 'col', 'COL.COLO4_36438' => 'col', 'COL.COLO4_36439' => 'col', 'Cpa.g.c38781' => 'cpa', 'Cpa.g.sc128.12' => 'cpa', 'Cpa.g.sc166.7' => 'cpa', 'Cpa.g.sc166.8' => 'cpa', 'Cpa.g.sc20.111' => 'cpa', 'Cpa.g.sc27.31' => 'cpa', 'Cpa.g.sc64.36' => 'cpa', 'Cpa.g.sc64.37' => 'cpa', 'Cpa.g.sc66.49' => 'cpa', 'Cpa.g.sc80.64' => 'cpa', 'CsaV3_1G012320' => 'csa', 'CsaV3_2G008480' => 'csa', 'CsaV3_2G033450' => 'csa', 'CsaV3_3G044830' => 'csa', 'CsaV3_4G033710' => 'csa', 'CsaV3_6G051730' => 'csa', 'CsaV3_7G025350' => 'csa', 'CSS0001067' => 'camsi', 'CSS0005996' => 'camsi', 'CSS0006590' => 'camsi', 'CSS0009673' => 'camsi', 'CSS0010201' => 'camsi', 'CSS0010549' => 'camsi', 'CSS0011364' => 'camsi', 'CSS0014473' => 'camsi', 'CSS0014961' => 'camsi', 'CSS0020191' => 'camsi', 'CSS0021165' => 'camsi', 'CSS0022306' => 'camsi', 'CSS0030591' => 'camsi', 'CSS0030696' => 'camsi', 'CSS0032653' => 'camsi', 'CSS0037487' => 'camsi', 'CSS0041102' => 'camsi', 'CSS0041261' => 'camsi', 'CSS0046246' => 'camsi', 'CSS0049256' => 'camsi', 'DCAR_004075' => 'dca', 'DCAR_011538' => 'dca', 'DCAR_019553' => 'dca', 'DCAR_020952' => 'dca', 'DCAR_021739' => 'dca', 'DCAR_027407' => 'dca', 'DCAR_027913' => 'dca', 'DCAR_028066' => 'dca', 'Dinv05899' => 'din', 'Dinv07563' => 'din', 'Dinv08010' => 'din', 'Dinv14125' => 'din', 'Dinv20172' => 'din', 'Dinv30743' => 'din', 'Dinv31229' => 'din', 'Dinv34162' => 'din', 'Dinv36028' => 'din', 'Dinv39368' => 'din', 'Dinv40565' => 'din', 'Dinv41706' => 'din', 'Duzib052G0089' => 'dzi', 'Duzib116G0641' => 'dzi', 'Duzib132G0069' => 'dzi', 'Duzib132G1219' => 'dzi', 'Duzib147G0278' => 'dzi', 'Duzib160G0480' => 'dzi', 'Duzib170G0661' => 'dzi', 'Duzib177G0591' => 'dzi', 'Duzib187G1353' => 'dzi', 'Duzib192G0858' => 'dzi', 'Duzib192G0883' => 'dzi', 'Duzib213G0506' => 'dzi', 'Duzib235G0289' => 'dzi', 'Duzib251G0422' => 'dzi', 'ECA232G3898' => 'eca', 'ECA233G5950' => 'eca', 'ECA234G1699' => 'eca', 'ECA234G2421' => 'eca', 'ECA236G0426' => 'eca', 'ECA236G4331' => 'eca', 'ECA248G2573' => 'eca', 'EL10Ac1g00077' => 'bvu', 'EL10Ac1g01746' => 'bvu', 'EL10Ac2g03464' => 'bvu', 'EL10Ac4g08176' => 'bvu', 'EL10Ac7g17521' => 'bvu', 'EL10Ac8g20386' => 'bvu', 'EL10Ac9g21343' => 'bvu', 'EL10Ac9g22688' => 'bvu', 'Eucgr.B03434' => 'egr', 'Eucgr.D00618' => 'egr', 'Eucgr.E02395' => 'egr', 'Eucgr.F01129' => 'egr', 'Eucgr.F02622' => 'egr', 'Eucgr.F04207' => 'egr', 'FAN01G0570' => 'fan', 'FAN03G3351' => 'fan', 'FAN06G3702' => 'fan', 'FAN07G2149' => 'fan', 'FAN10G3758' => 'fan', 'FAN11G1170' => 'fan', 'FAN11G2050' => 'fan', 'FAN11G2724' => 'fan', 'FAN12G1700' => 'fan', 'FAN12G2028' => 'fan', 'FAN15G1160' => 'fan', 'FAN15G3063' => 'fan', 'FAN16G2540' => 'fan', 'FAN16G3077' => 'fan', 'FAN16G3624' => 'fan', 'FAN17G0221' => 'fan', 'FAN20G2492' => 'fan', 'FAN20G2905' => 'fan', 'FAN21G0548' => 'fan', 'FAN21G1300' => 'fan', 'FAN22G0077' => 'fan', 'FAN22G1315' => 'fan', 'FAN24G1280' => 'fan', 'FAN24G1445' => 'fan', 'FAN24G3527' => 'fan', 'FAN25G0464' => 'fan', 'FAN25G2885' => 'fan', 'FAN25G3270' => 'fan', 'FAN27G1101' => 'fan', 'FAN27G2846' => 'fan', 'FAN27G3524' => 'fan', 'FvH4_2g11770' => 'fve', 'FvH4_2g15630' => 'fve', 'FvH4_3g05570' => 'fve', 'FvH4_3g09110' => 'fve', 'FvH4_3g19940' => 'fve', 'FvH4_4g04821' => 'fve', 'FvH4_4g31480' => 'fve', 'FvH4_7g01740' => 'fve', 'Glyma.05G130400' => 'gma', 'Glyma.05G156400' => 'gma', 'Glyma.07G197000' => 'gma', 'Glyma.08G085151' => 'gma', 'Glyma.08G114500' => 'gma', 'Glyma.08G300400' => 'gma', 'Glyma.10G215800' => 'gma', 'Glyma.12G224400' => 'gma', 'Glyma.13G179300' => 'gma', 'Glyma.13G218151' => 'gma', 'Glyma.13G238800' => 'gma', 'Glyma.13G276900' => 'gma', 'Glyma.14G078200' => 'gma', 'Glyma.15G074500' => 'gma', 'Glyma.15G094100' => 'gma', 'Glyma.17G247200' => 'gma', 'Glyma.18G120100' => 'gma', 'Glyma.20G176000' => 'gma', 'Gohir.A01G063600' => 'ghi', 'Gohir.A01G170301' => 'ghi', 'Gohir.A02G060500' => 'ghi', 'Gohir.A05G133850' => 'ghi', 'Gohir.A05G161400' => 'ghi', 'Gohir.A06G012900' => 'ghi', 'Gohir.A06G035901' => 'ghi', 'Gohir.A06G127100' => 'ghi', 'Gohir.A06G210500' => 'ghi', 'Gohir.A08G008650' => 'ghi', 'Gohir.A09G072700' => 'ghi', 'Gohir.A09G088301' => 'ghi', 'Gohir.A10G040600' => 'ghi', 'Gohir.A12G036300' => 'ghi', 'Gohir.A12G143350' => 'ghi', 'Gohir.A12G165500' => 'ghi', 'Gohir.A13G145700' => 'ghi', 'Gohir.D01G050000' => 'ghi', 'Gohir.D01G051366' => 'ghi', 'Gohir.D01G161350' => 'ghi', 'Gohir.D02G065900' => 'ghi', 'Gohir.D05G164200' => 'ghi', 'Gohir.D05G355500' => 'ghi', 'Gohir.D06G010400' => 'ghi', 'Gohir.D06G111250' => 'ghi', 'Gohir.D06G132000' => 'ghi', 'Gohir.D06G210500' => 'ghi', 'Gohir.D07G165675' => 'ghi', 'Gohir.D08G062240' => 'ghi', 'Gohir.D08G086101' => 'ghi', 'Gohir.D08G138060' => 'ghi', 'Gohir.D09G072300' => 'ghi', 'Gohir.D10G041400' => 'ghi', 'Gohir.D11G191020' => 'ghi', 'Gohir.D11G212066' => 'ghi', 'Gohir.D12G036300' => 'ghi', 'Gohir.D12G168600' => 'ghi', 'Gohir.D13G150600' => 'ghi', 'Gorai.001G057300' => 'gra', 'Gorai.002G069900' => 'gra', 'Gorai.002G200000' => 'gra', 'Gorai.003G067600' => 'gra', 'Gorai.005G074800' => 'gra', 'Gorai.006G087300' => 'gra', 'Gorai.008G037500' => 'gra', 'Gorai.008G181400' => 'gra', 'Gorai.009G169400' => 'gra', 'Gorai.009G387900' => 'gra', 'Gorai.010G013300' => 'gra', 'Gorai.010G153800' => 'gra', 'Gorai.010G255800' => 'gra', 'Gorai.011G043700' => 'gra', 'Gorai.011G198900' => 'gra', 'Gorai.013G168400' => 'gra', 'GSVIVG01005212001' => 'vvi', 'GSVIVG01006163001' => 'vvi', 'GSVIVG01009625001' => 'vvi', 'GSVIVG01014338001' => 'vvi', 'GSVIVG01020005001' => 'vvi', 'GSVIVG01021450001' => 'vvi', 'GSVIVG01023975001' => 'vvi', 'GSVIVG01034490001' => 'vvi', 'HanXRQChr04g0112071' => 'han', 'HanXRQChr05g0131151' => 'han', 'HanXRQChr09g0262371' => 'han', 'HanXRQChr09g0268401' => 'han', 'HanXRQChr10g0279241' => 'han', 'HanXRQChr10g0297961' => 'han', 'HanXRQChr11g0326231' => 'han', 'HanXRQChr11g0328471' => 'han', 'HanXRQChr16g0507941' => 'han', 'HanXRQChr17g0560211' => 'han', 'Haze_02108' => 'cav', 'Haze_02428' => 'cav', 'Haze_05593' => 'cav', 'Haze_06448' => 'cav', 'Haze_09427' => 'cav', 'Haze_12022' => 'cav', 'Haze_17612' => 'cav', 'Haze_17928' => 'cav', 'Hma1.2p1_0032F.1_g019250' => 'hma', 'Hma1.2p1_0163F.1_g072690' => 'hma', 'Hma1.2p1_0265F.1_g106710' => 'hma', 'Hma1.2p1_0286F.1_g113970' => 'hma', 'Hma1.2p1_0363F.1_g136640' => 'hma', 'Hma1.2p1_0584F.1_g183470' => 'hma', 'Hma1.2p1_0885F.1_g232570' => 'hma', 'HPP92_006022' => 'vpl', 'HPP92_007320' => 'vpl', 'HPP92_011521' => 'vpl', 'HPP92_019387' => 'vpl', 'HPP92_024038' => 'vpl', 'Hund05891' => 'sun', 'Hund06450' => 'sun', 'Hund12053' => 'sun', 'Hund16800' => 'sun', 'Hund21222' => 'sun', 'Hund22896' => 'sun', 'Hund23746' => 'sun', 'Hund27083' => 'sun', 'Lalb_Chr02g0141831' => 'lal', 'Lalb_Chr02g0141841' => 'lal', 'Lalb_Chr05g0220411' => 'lal', 'Lalb_Chr06g0162081' => 'lal', 'Lalb_Chr09g0327651' => 'lal', 'Lalb_Chr13g0295051' => 'lal', 'Lalb_Chr15g0086801' => 'lal', 'Lalb_Chr16g0383781' => 'lal', 'Lalb_Chr16g0383791' => 'lal', 'Lalb_Chr18g0055441' => 'lal', 'Lalb_Chr18g0059611' => 'lal', 'Lalb_Chr20g0109661' => 'lal', 'Lalb_Chr20g0109831' => 'lal', 'Lalb_Chr20g0121871' => 'lal', 'Lalb_Chr22g0355361' => 'lal', 'Lalb_Chr25g0286371' => 'lal', 'Lj1A1187G43' => 'lonja', 'Lj1A1205T50' => 'lonja', 'Lj1A800G33' => 'lonja', 'Lj1C1187T7' => 'lonja', 'Lj1C843T11' => 'lonja', 'Lj1g0010940' => 'lja', 'Lj2A288T69' => 'lonja', 'Lj3g0024276' => 'lja', 'Lj4A47T76' => 'lonja', 'Lj4g0005805' => 'lja', 'Lj4g0006097' => 'lja', 'Lj4g0008528' => 'lja', 'Lj4g0024907' => 'lja', 'Lj5g0012472' => 'lja', 'Lj5g0018648' => 'lja', 'Lj6C789G1' => 'lonja', 'Lj6g0004000' => 'lja', 'Lj7A292G67' => 'lonja', 'Lj7A292T64' => 'lonja', 'Lj9A400T58' => 'lonja', 'Lsat_1_v5_gn_1_126181' => 'lsa', 'Lsat_1_v5_gn_4_123041' => 'lsa', 'Lsat_1_v5_gn_4_133620' => 'lsa', 'Lsat_1_v5_gn_4_53221' => 'lsa', 'Lsat_1_v5_gn_4_71961' => 'lsa', 'Lsat_1_v5_gn_7_105241' => 'lsa', 'Lsat_1_v5_gn_7_21361' => 'lsa', 'Lsat_1_v5_gn_7_28860' => 'lsa', 'Lsat_1_v5_gn_7_31260' => 'lsa', 'Lsat_1_v5_gn_8_52801' => 'lsa', 'Manes.02G191400' => 'mes', 'Manes.03G110100' => 'mes', 'Manes.04G071100' => 'mes', 'Manes.05G100500' => 'mes', 'Manes.05G164700' => 'mes', 'Manes.15G087000' => 'mes', 'Manes.15G121500' => 'mes', 'Manes.16G028300' => 'mes', 'Manes.17G046100' => 'mes', 'Manes.17G069800' => 'mes', 'Manes.18G100500' => 'mes', 'Mapoly0002s0109' => 'mpo', 'Mapoly0024s0007' => 'mpo', 'Mapoly0089s0032' => 'mpo', 'MBI04_g42241_MAGBIO' => 'mbi', 'MBI05_g11988_MAGBIO' => 'mbi', 'MBI05_g35452_MAGBIO' => 'mbi', 'MBI07_g30179_MAGBIO' => 'mbi', 'MBI07_g35859_MAGBIO' => 'mbi', 'MBI07_g35860_MAGBIO' => 'mbi', 'MBI07_g37166_MAGBIO' => 'mbi', 'MBI08_g18172_MAGBIO' => 'mbi', 'MBI09_g08441_MAGBIO' => 'mbi', 'MBI13_g01676_MAGBIO' => 'mbi', 'MBI14_g42955_MAGBIO' => 'mbi', 'MBI16_g13161_MAGBIO' => 'mbi', 'MBI17_g27204_MAGBIO' => 'mbi', 'MBI19_g21595_MAGBIO' => 'mbi', 'MD00G1148400' => 'mdo', 'MD02G1301200' => 'mdo', 'MD03G1227800' => 'mdo', 'MD05G1041100' => 'mdo', 'MD05G1124800' => 'mdo', 'MD05G1284000' => 'mdo', 'MD05G1338800' => 'mdo', 'MD05G1338900' => 'mdo', 'MD07G1022800' => 'mdo', 'MD10G1047500' => 'mdo', 'MD10G1127500' => 'mdo', 'MD10G1262300' => 'mdo', 'MD10G1293800' => 'mdo', 'MD16G1074300' => 'mdo', 'Medtr1g021670' => 'mtr', 'Medtr1g096320' => 'mtr', 'Medtr2g013690' => 'mtr', 'Medtr2g019450' => 'mtr', 'Medtr2g085170' => 'mtr', 'Medtr4g088785' => 'mtr', 'Medtr8g055930' => 'mtr', 'Medtr8g085850' => 'mtr', 'MELO3C002605.2' => 'cme', 'MELO3C003891.2' => 'cme', 'MELO3C004012.2' => 'cme', 'MELO3C007134.2' => 'cme', 'MELO3C008118.2' => 'cme', 'MELO3C016700.2' => 'cme', 'MELO3C024127.2' => 'cme', 'MELO3C033361.2' => 'cme', 'MELO3C033362.2' => 'cme', 'Migut.C00430' => 'egut', 'Migut.C01246' => 'egut', 'Migut.E00101' => 'egut', 'Migut.H01486' => 'egut', 'Migut.H01939' => 'egut', 'Migut.K00360' => 'egut', 'Migut.M00910' => 'egut', 'Migut.M01139' => 'egut', 'Migut.N02677' => 'egut', 'MSTRG.13252' => 'ama', 'MSTRG.14701' => 'ama', 'MSTRG.1521' => 'ama', 'MSTRG.15884' => 'ama', 'MSTRG.16242' => 'ama', 'MSTRG.22285' => 'ama', 'MSTRG.22444' => 'ama', 'MSTRG.2349' => 'ama', 'MSTRG.26308' => 'ama', 'MSTRG.28296' => 'ama', 'MSTRG.9895' => 'ama', 'Nitab4.5_0000110g0060' => 'nta', 'Nitab4.5_0000420g0130' => 'nta', 'Nitab4.5_0000422g0030' => 'nta', 'Nitab4.5_0000560g0180' => 'nta', 'Nitab4.5_0000703g0100' => 'nta', 'Nitab4.5_0000786g0200' => 'nta', 'Nitab4.5_0001336g0020' => 'nta', 'Nitab4.5_0001796g0030' => 'nta', 'Nitab4.5_0003348g0060' => 'nta', 'Nitab4.5_0003698g0040' => 'nta', 'Nitab4.5_0003942g0090' => 'nta', 'Nitab4.5_0004775g0070' => 'nta', 'Nitab4.5_0004864g0030' => 'nta', 'Nitab4.5_0005615g0020' => 'nta', 'Nitab4.5_0009288g0030' => 'nta', 'Nitab4.5_0009341g0010' => 'nta', 'Nitab4.5_0009535g0010' => 'nta', 'Nn1g03995' => 'nnu', 'Nn1g04100' => 'nnu', 'Nn1g06530' => 'nnu', 'Nn3g16404' => 'nnu', 'Nn3g17212' => 'nnu', 'Nn3g20776' => 'nnu', 'Nn3g21923' => 'nnu', 'Nn5g27737' => 'nnu', 'Nn5g29461' => 'nnu', 'Nn7g38355' => 'nnu', 'Nn8g39873' => 'nnu', 'Oeu000548.2' => 'oeu', 'Oeu004672.1' => 'oeu', 'Oeu015605.2' => 'oeu', 'Oeu016092.1' => 'oeu', 'Oeu017879.3' => 'oeu', 'Oeu024910.1' => 'oeu', 'Oeu028965.1' => 'oeu', 'Oeu031269.1' => 'oeu', 'Oeu031270.1' => 'oeu', 'Oeu032535.1' => 'oeu', 'Oeu034151.1' => 'oeu', 'Oeu034152.1' => 'oeu', 'Oeu034588.2' => 'oeu', 'Oeu050846.1' => 'oeu', 'Oeu050849.2' => 'oeu', 'Oeu051063.2' => 'oeu', 'Oeu052368.1' => 'oeu', 'Oeu052370.1' => 'oeu', 'Os01g0210400' => 'osa', 'Os01g0304300' => 'osa', 'Os01g0749100' => 'osa', 'Os02g0745800' => 'osa', 'Os03g0769050' => 'osa', 'Os05g0531500' => 'osa', 'Os06g0724300' => 'osa', 'Os11g0198100' => 'osa', 'Peaxi162Scf00069g01425' => 'pax', 'Peaxi162Scf00280g00811' => 'pax', 'Peaxi162Scf00310g00615' => 'pax', 'Peaxi162Scf00362g00542' => 'pax', 'Peaxi162Scf00461g00310' => 'pax', 'Peaxi162Scf00530g00118' => 'pax', 'Peaxi162Scf00541g00057' => 'pax', 'Peaxi162Scf00661g00017' => 'pax', 'Peaxi162Scf00926g00027' => 'pax', 'Peaxi162Scf01064g00263' => 'pax', 'Peaxi162Scf01211g00135' => 'pax', 'PGR004G2336' => 'pgr', 'PGR042G0327' => 'pgr', 'PGR042G1957' => 'pgr', 'PGR042G2003' => 'pgr', 'PGR042G3929' => 'pgr', 'PGR083G1137' => 'pgr', 'PGR083G1364' => 'pgr', 'PGSC0003DMG400003381' => 'stu', 'PGSC0003DMG400003417' => 'stu', 'PGSC0003DMG400008981' => 'stu', 'PGSC0003DMG400012417' => 'stu', 'PGSC0003DMG400012823' => 'stu', 'PGSC0003DMG400016885' => 'stu', 'PGSC0003DMG400022812' => 'stu', 'PGSC0003DMG400029726' => 'stu', 'PGSC0003DMG401009243' => 'stu', 'PGSC0003DMG401031505' => 'stu', 'PGSC0003DMG402031505' => 'stu', 'Phvul.001G017600' => 'pvu', 'Phvul.002G193500' => 'pvu', 'Phvul.002G228900' => 'pvu', 'Phvul.002G236800' => 'pvu', 'Phvul.003G049500' => 'pvu', 'Phvul.005G072000' => 'pvu', 'Phvul.006G164800' => 'pvu', 'Phvul.006G185100' => 'pvu', 'Phvul.007G090000' => 'pvu', 'Potri.001G399800' => 'ptr', 'Potri.002G149900' => 'ptr', 'Potri.004G044100' => 'ptr', 'Potri.004G177600' => 'ptr', 'Potri.009G138000' => 'ptr', 'Potri.010G094000' => 'ptr', 'Potri.011G053000' => 'ptr', 'Potri.011G119300' => 'ptr', 'Potri.013G113700' => 'ptr', 'Potri.018G107800' => 'ptr', 'Potri.019G084100' => 'ptr', 'Pp3c14_23720' => 'ppa', 'Pp3c16_6340' => 'ppa', 'Pp3c23_13420' => 'ppa', 'Pp3c24_2740' => 'ppa', 'Pp3c25_860' => 'ppa', 'Pp3c8_21750' => 'ppa', 'Prupe.1G273000' => 'ppe', 'Prupe.1G273700' => 'ppe', 'Prupe.1G274100' => 'ppe', 'Prupe.2G023300' => 'ppe', 'Prupe.4G048000' => 'ppe', 'Prupe.4G080400' => 'ppe', 'Prupe.4G181200' => 'ppe', 'Prupe.8G056900' => 'ppe', 'Prupe.8G168700' => 'ppe', 'Psat1g189080' => 'psa', 'Psat1g204760' => 'psa', 'Psat4g175560' => 'psa', 'Psat4g177720' => 'psa', 'Psat5g244240' => 'psa', 'Psat6g010720' => 'psa', 'Psat6g187200' => 'psa', 'Psat7g072040' => 'psa', 'PSO017G3501' => 'pso', 'PSO063G2148' => 'pso', 'PSO063G5608' => 'pso', 'PSO210G6392' => 'pso', 'PSO541G2319' => 'pso', 'PSO541G2836' => 'pso', 'PSO541G4012' => 'pso', 'PSO541G6253' => 'pso', 'PSO675G0580' => 'pso', 'PSO675G0856' => 'pso', 'PSO675G5635' => 'pso', 'PSO675G9157' => 'pso', 'PSO832G1660' => 'pso', 'PSO832G1969' => 'pso', 'QL02p007186' => 'qlo', 'QL02p033904' => 'qlo', 'QL03p064391' => 'qlo', 'QL05p040593' => 'qlo', 'QL05p058242' => 'qlo', 'QL08p021825' => 'qlo', 'QL11p004981' => 'qlo', 'RcHm_v2.0_Chr1g0318301' => 'rch', 'RcHm_v2.0_Chr4g0418501' => 'rch', 'RcHm_v2.0_Chr4g0439971' => 'rch', 'RcHm_v2.0_Chr5g0008541' => 'rch', 'RcHm_v2.0_Chr5g0014101' => 'rch', 'RcHm_v2.0_Chr5g0014131' => 'rch', 'RcHm_v2.0_Chr5g0033621' => 'rch', 'RcHm_v2.0_Chr6g0272041' => 'rch', 'RcHm_v2.0_Chr6g0278831' => 'rch', 'Rhsim02G0130400' => 'rsi', 'Rhsim02G0171100' => 'rsi', 'Rhsim05G0053000' => 'rsi', 'Rhsim05G0053100' => 'rsi', 'Rhsim06G0096500' => 'rsi', 'Rhsim06G0096600' => 'rsi', 'Rhsim06G0199100' => 'rsi', 'Rhsim12G0062300' => 'rsi', 'Rhsim12G0062800' => 'rsi', 'Sabra02G0118600' => 'sbr', 'Sabra04G0027300' => 'sbr', 'Sabra04G0119500' => 'sbr', 'Sabra08G0112500' => 'sbr', 'Sabra11G0036800' => 'sbr', 'Sabra11G0103800' => 'sbr', 'Sabra13G0096300' => 'sbr', 'Sabra16G0262300' => 'sbr', 'Sabra18G0091700' => 'sbr', 'Sabra19G0095400' => 'sbr', 'SalBow6G3080' => 'sbo', 'SalBow7G1157' => 'sbo', 'SalBow7G2123' => 'sbo', 'SalBow7G2285' => 'sbo', 'SalBow7G3537' => 'sbo', 'SalBow8G2947' => 'sbo', 'SalBow8G4463' => 'sbo', 'SalBow8G5466' => 'sbo', 'Sc01g0001750' => 'sci', 'Sc02g0006640' => 'sci', 'Sc02g0006670' => 'sci', 'Sc04g0008220' => 'sci', 'Sc05g0006190' => 'sci', 'Sc08g0002760' => 'sci', 'Sc17g0006170' => 'sci', 'Sc22g0002050' => 'sci', 'Sc23g0001190' => 'sci', 'Sc24g0000980' => 'sci', 'Sed0006245' => 'sed', 'Sed0007543' => 'sed', 'Sed0009411' => 'sed', 'Sed0010765' => 'sed', 'Sed0012944' => 'sed', 'Sed0014682' => 'sed', 'Sed0016174' => 'sed', 'Sed0016796' => 'sed', 'Sed0020317' => 'sed', 'Sed0021467' => 'sed', 'SEGI_01316' => 'sgi', 'SEGI_03374' => 'sgi', 'SEGI_16265' => 'sgi', 'SEGI_18569' => 'sgi', 'SEGI_20351' => 'sgi', 'SEGI_26395' => 'sgi', 'SEGI_29469' => 'sgi', 'SEGI_34771' => 'sgi', 'SEGI_36769' => 'sgi', 'SEGI_37139' => 'sgi', 'SGA_v2.0_scaffold100G29687' => 'sas', 'SGA_v2.0_scaffold118G32472' => 'sas', 'SGA_v2.0_scaffold14G07051' => 'sas', 'SGA_v2.0_scaffold183G39845' => 'sas', 'SGA_v2.0_scaffold1G00174' => 'sas', 'SGA_v2.0_scaffold22G09714' => 'sas', 'SGA_v2.0_scaffold333G48992' => 'sas', 'SGA_v2.0_scaffold46G17491' => 'sas', 'SGA_v2.0_scaffold49G18294' => 'sas', 'SGA_v2.0_scaffold63G21658' => 'sas', 'SHI01741' => 'shi', 'SHI05771' => 'shi', 'SHI18077' => 'shi', 'SHI20525' => 'shi', 'SHI20527' => 'shi', 'SHI20528' => 'shi', 'SMO172G0185' => 'smo', 'SMO198G0020' => 'smo', 'SMO351G0006' => 'smo', 'SMO356G0118' => 'smo', 'SMO358G0296' => 'smo', 'SMO367G0079' => 'smo', 'SMO367G1277' => 'smo', 'Solyc01g014220.3' => 'sly', 'Solyc01g111770.2' => 'sly', 'Solyc02g078180.3' => 'sly', 'Solyc03g006430.3' => 'sly', 'Solyc03g006456.1' => 'sly', 'Solyc03g079860.2' => 'sly', 'Solyc04g079770.3' => 'sly', 'Solyc05g007430.4' => 'sly', 'Solyc07g063150.3' => 'sly', 'Solyc08g016620.3' => 'sly', 'Solyc09g057590.3' => 'sly', 'Solyc09g057600.1' => 'sly', 'Solyc10g009050.3' => 'sly', 'Solyc11g017420.2' => 'sly', 'Sopen01g053810' => 'spe', 'Sopen02g023040' => 'spe', 'Sopen03g002440' => 'spe', 'Sopen04g033350' => 'spe', 'Sopen05g003310' => 'spe', 'Sopen07g004050' => 'spe', 'Sopen07g031340' => 'spe', 'Sopen08g006990' => 'spe', 'Sopen10g004830' => 'spe', 'Sopen11g009370' => 'spe', 'Sp1g24450' => 'spa', 'Sp1g29670' => 'spa', 'Sp1g39600' => 'spa', 'Sp2g11080' => 'spa', 'Sp2g13970' => 'spa', 'Sp4g16130' => 'spa', 'Sp6g13080' => 'spa', 'Sp7g37270' => 'spa', 'TAR371G0065' => 'tar', 'TAR376G0340' => 'tar', 'TAR376G0435' => 'tar', 'TAR381G0002' => 'tar', 'TAR381G1236' => 'tar', 'TAR624G0055' => 'tar', 'TAR624G0324' => 'tar', 'TAR624G0696' => 'tar', 'TAR624G0906' => 'tar', 'TAR625G0107' => 'tar', 'TAR626G0015' => 'tar', 'TAR626G1356' => 'tar', 'TAR627G0888' => 'tar', 'TAR628G0399' => 'tar', 'TAR628G1327' => 'tar', 'TAR629G2831' => 'tar', 'TAR629G2874' => 'tar', 'TAR633G1432' => 'tar', 'TAR633G2771' => 'tar', 'THA.LOC104803394' => 'tha', 'THA.LOC104805153' => 'tha', 'THA.LOC104806784' => 'tha', 'THA.LOC104810473' => 'tha', 'THA.LOC104813100' => 'tha', 'THA.LOC104814215' => 'tha', 'THA.LOC104815554' => 'tha', 'THA.LOC104820544' => 'tha', 'THA.LOC104824754' => 'tha', 'THA.LOC104827717' => 'tha', 'Thecc.02G031400' => 'tca', 'Thecc.02G055900' => 'tca', 'Thecc.02G350800' => 'tca', 'Thecc.06G150900' => 'tca', 'Thecc.06G186600' => 'tca', 'Thecc.07G089600' => 'tca', 'Thecc.08G020400' => 'tca', 'Thecc.08G182100' => 'tca', 'Thhalv10000873m.g' => 'esa', 'Thhalv10004185m.g' => 'esa', 'Thhalv10006981m.g' => 'esa', 'Thhalv10007204m.g' => 'esa', 'Thhalv10011374m.g' => 'esa', 'Thhalv10013482m.g' => 'esa', 'Thhalv10017801m.g' => 'esa', 'Thhalv10024983m.g' => 'esa', 'TPR.G12072' => 'tpr', 'TPR.G15769' => 'tpr', 'TPR.G16504' => 'tpr', 'TPR.G16506' => 'tpr', 'TPR.G24345' => 'tpr', 'TPR.G26666' => 'tpr', 'TPR.G27320' => 'tpr', 'TPR.G31819' => 'tpr', 'TPR.G38879' => 'tpr', 'TPR.G39015' => 'tpr', 'TPR.G8819' => 'tpr', 'TWI09G0924' => 'twi', 'TWI12G0811' => 'twi', 'TWI12G1294' => 'twi', 'TWI31G0150' => 'twi', 'TWI36G1262' => 'twi', 'TWI38G1287' => 'twi', 'TWI38G1633' => 'twi', 'TWI38G1982' => 'twi', 'TWI39G0116' => 'twi', 'TWI60G1011' => 'twi', 'TWI63G0171' => 'twi', 'TWI73G0839' => 'twi', 'TWI79G1511' => 'twi', 'unitig_0.g915' => 'ugi', 'unitig_0.g916' => 'ugi', 'unitig_21.g20219' => 'ugi', 'unitig_21.g20416' => 'ugi', 'unitig_578.g16132' => 'ugi', 'unitig_578.g16718' => 'ugi', 'unitig_62.g23481' => 'ugi', 'unitig_744.g24535' => 'ugi', 'unitig_749.g13525' => 'ugi', 'vmacro01248' => 'vma', 'vmacro02290' => 'vma', 'vmacro10946' => 'vma', 'vmacro11865' => 'vma', 'vmacro12493' => 'vma', 'vmacro17322' => 'vma', 'vmacro21599' => 'vma', 'vmacro23041' => 'vma', 'VMungo0251G0004' => 'vmu', 'VMungo0251G2639' => 'vmu', 'VMungo0251G2967' => 'vmu', 'VMungo0540G0864' => 'vmu', 'VMungo0540G1569' => 'vmu', 'VMungo0647G0317' => 'vmu', 'VMungo0720G1373' => 'vmu', 'VMungo0720G1508' => 'vmu', 'VMungo1080G0485' => 'vmu', 'VMungo1215G3177' => 'vmu', 'Zm00001eb112600' => 'zma', 'Zm00001eb120220' => 'zma', 'Zm00001eb153240' => 'zma', 'Zm00001eb168880' => 'zma', 'Zm00001eb213920' => 'zma', 'Zm00001eb228280' => 'zma', 'Zm00001eb254580' => 'zma', 'Zm00001eb272180' => 'zma', 'Zm00001eb293190' => 'zma', 'Zm00001eb322930' => 'zma', 'Zm00001eb353360' => 'zma', 'Zm00001eb353390' => 'zma', 'Zm00001eb353430' => 'zma', 'Zm00001eb353440' => 'zma', 'Zm00001eb353780' => 'zma' ) $gf_id = 'HOM05D000499' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000499' ) $data_identifier = 'HOM05D000499' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 29, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 12, 'amhyb' => (int) 8, 'aly' => (int) 12, 'aox' => (int) 9, 'arhy' => (int) 26, 'ath' => (int) 8, 'atr' => (int) 7, 'acertr' => (int) 10, 'cqu' => (int) 15, 'bca' => (int) 29, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 11, 'cansat' => (int) 8, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 9, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 8, 'cpa' => (int) 10, 'csa' => (int) 7, 'camsi' => (int) 20, 'dca' => (int) 8, 'din' => (int) 12, 'dzi' => (int) 14, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 6, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 38, 'gra' => (int) 16, 'vvi' => (int) 8, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 5, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 11, 'lja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 11, 'mpo' => (int) 3, 'mbi' => (int) 14, 'mdo' => (int) 14, 'mtr' => (int) 8, 'cme' => (int) 9, 'egut' => (int) 9, 'ama' => (int) 11, 'nta' => (int) 17, 'nnu' => (int) 11, 'oeu' => (int) 18, 'osa' => (int) 8, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 6, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 9, 'rsi' => (int) 9, 'sbr' => (int) 10, 'sbo' => (int) 8, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 10, 'sas' => (int) 10, 'shi' => (int) 6, 'smo' => (int) 7, 'sly' => (int) 14, 'spe' => (int) 10, 'spa' => (int) 8, 'tar' => (int) 19, 'tha' => (int) 10, 'tca' => (int) 8, 'esa' => (int) 8, 'tpr' => (int) 11, 'twi' => (int) 13, 'ugi' => (int) 9, 'vma' => (int) 8, 'vmu' => (int) 10, 'zma' => (int) 15 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb353780' $species_info = array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ) $local_species = 'mbi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000499', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1066', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p29780' => 'bna', 'A02p33180' => 'bna', 'A03p16470' => 'bna', 'A03p66010' => 'bna', 'A04p25970' => 'bna', 'A06p01270' => 'bna', 'A06p46080' => 'bna', 'A07p11400' => 'bna', 'A08p01840' => 'bna', 'A08p08230' => 'bna', 'A08p25740' => 'bna', 'A09p32070' => 'bna', 'A09p37830' => 'bna', 'A09p42840' => 'bna', 'A09p42850' => 'bna', 'Aa31LG10G2060' => 'aar', 'Aa31LG2G7410' => 'aar', 'Aa31LG6G10200' => 'aar', 'Aa31LG6G16680' => 'aar', 'Aa31LG6G8470' => 'aar', 'Aa31LG9G12730' => 'aar', 'Aa31LG9G13680' => 'aar', 'Aa31LG9G14920' => 'aar', 'Aa31LG9G6650' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4977' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5467' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3254' => 'aag', 'Actinidia02578' => 'ach', 'Actinidia07693' => 'ach', 'Actinidia08413' => 'ach', 'Actinidia08414' => 'ach', 'Actinidia15289' => 'ach', 'Actinidia19871' => 'ach', 'Actinidia21475' => 'ach', 'Actinidia22576' => 'ach', 'Actinidia28327' => 'ach', 'Actinidia32491' => 'ach', 'Actinidia39463' => 'ach', 'Actinidia39571' => 'ach', 'Ah.01g013750' => 'amhyb', 'Ah.01g023210' => 'amhyb', 'Ah.04g164850' => 'amhyb', 'Ah.05g178060' => 'amhyb', 'Ah.07g204270' => 'amhyb', 'Ah.07g208480' => 'amhyb', 'Ah.09g237410' => 'amhyb', 'Ah.14g089460' => 'amhyb', 'AL1G41790' => 'aly', 'AL1G49050' => 'aly', 'AL1G53810' => 'aly', 'AL1G61400' => 'aly', 'AL4G18580' => 'aly', 'AL5G12510' => 'aly', 'AL5G12540' => 'aly', 'AL6G43230' => 'aly', 'AL7G10370' => 'aly', 'AL7G19250' => 'aly', 'AL8G12240' => 'aly', 'AL8G18540' => 'aly', 'Aqoxy1G02409' => 'aox', 'Aqoxy2G03993' => 'aox', 'Aqoxy3G03357' => 'aox', 'Aqoxy4G00785' => 'aox', 'Aqoxy5G02598' => 'aox', 'Aqoxy6G00132' => 'aox', 'Aqoxy7G01776' => 'aox', 'Aqoxy7G02316' => 'aox', 'Aqoxy7G03973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.12AFKW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B8730' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27IQR1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3F75VG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3RE0GA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41TCQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.527VTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FIR39' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5W8UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DA38EV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ63HS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H1I32C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HC27T5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4M8AP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7N3CZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9UVDZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LS1NQA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT1D4B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SKC4TM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCFV76' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF9Q1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQWD9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1ZM88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WE07RT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YCK7VH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJE6Q6' => 'arhy', 'AT1G28240' => 'ath', 'AT1G34550' => 'ath', 'AT1G53040' => 'ath', 'AT2G02910' => 'ath', 'AT4G09630' => 'ath', 'AT4G38500' => 'ath', 'AT5G42660' => 'ath', 'AT5G46220' => 'ath', 'ATR0152G026' => 'atr', 'ATR0564G343' => 'atr', 'ATR0706G151' => 'atr', 'ATR0733G207' => 'atr', 'ATR0751G234' => 'atr', 'ATR0807G048' => 'atr', 'ATR1091G084' => 'atr', 'Atru.chr10.1229' => 'acertr', 'Atru.chr10.1230' => 'acertr', 'Atru.chr10.1874' => 'acertr', 'Atru.chr11.1808' => 'acertr', 'Atru.chr13.1795' => 'acertr', 'Atru.chr13.570' => 'acertr', 'Atru.chr2.2608' => 'acertr', 'Atru.chr2.2609' => 'acertr', 'Atru.chr5.3428' => 'acertr', 'Atru.chr8.1171' => 'acertr', 'AUR62004651' => 'cqu', 'AUR62008675' => 'cqu', 'AUR62010014' => 'cqu', 'AUR62013004' => 'cqu', 'AUR62014825' => 'cqu', 'AUR62015015' => 'cqu', 'AUR62015151' => 'cqu', 'AUR62017020' => 'cqu', 'AUR62019422' => 'cqu', 'AUR62023570' => 'cqu', 'AUR62025571' => 'cqu', 'AUR62029098' => 'cqu', 'AUR62033863' => 'cqu', 'AUR62034296' => 'cqu', 'AUR62040075' => 'cqu', 'BcaB02g07334' => 'bca', 'BcaB02g10575' => 'bca', 'BcaB03g12119' => 'bca', 'BcaB03g12120' => 'bca', 'BcaB03g13945' => 'bca', 'BcaB04g17123' => 'bca', 'BcaB04g17867' => 'bca', 'BcaB04g19839' => 'bca', 'BcaB07g30317' => 'bca', 'BcaB07g32432' => 'bca', 'BcaB07g33362' => 'bca', 'BcaB08g36611' => 'bca', 'BcaC01g00028' => 'bca', 'BcaC01g01356' => 'bca', 'BcaC01g02034' => 'bca', 'BcaC01g06051' => 'bca', 'BcaC03g16839' => 'bca', 'BcaC03g17176' => 'bca', 'BcaC05g26829' => 'bca', 'BcaC06g31490' => 'bca', 'BcaC06g35344' => 'bca', 'BcaC06g36570' => 'bca', 'BcaC07g37537' => 'bca', 'BcaC08g43491' => 'bca', 'BcaC08g43773' => 'bca', 'BcaNung00234' => 'bca', 'BcaNung01982' => 'bca', 'BcaNung03707' => 'bca', 'BcaNung06454' => 'bca', 'BolC2t10762H' => 'bol', 'BolC2t11191H' => 'bol', 'BolC3t14322H' => 'bol', 'BolC3t19747H' => 'bol', 'BolC3t21425H' => 'bol', 'BolC4t27800H' => 'bol', 'BolC5t31423H' => 'bol', 'BolC6t35951H' => 'bol', 'BolC6t36282H' => 'bol', 'BolC7t40678H' => 'bol', 'BolC7t40679H' => 'bol', 'BolC7t42222H' => 'bol', 'BolC7t43492H' => 'bol', 'BolC7t46785H' => 'bol', 'BolC8t47853H' => 'bol', 'BolC9t56805H' => 'bol', 'BraA02t08000Z' => 'bra', 'BraA02t08341Z' => 'bra', 'BraA03t10936Z' => 'bra', 'BraA03t15657Z' => 'bra', 'BraA04t18100Z' => 'bra', 'BraA05t20523Z' => 'bra', 'BraA06t23353Z' => 'bra', 'BraA06t27473Z' => 'bra', 'BraA06t27769Z' => 'bra', 'BraA07t28928Z' => 'bra', 'BraA08t32236Z' => 'bra', 'BraA08t32841Z' => 'bra', 'BraA08t34524Z' => 'bra', 'BraA09t38742Z' => 'bra', 'BraA09t39295Z' => 'bra', 'C02p47180' => 'bna', 'C02p50990' => 'bna', 'C03p19360' => 'bna', 'C03p74950' => 'bna', 'C03p91000' => 'bna', 'C04p63260' => 'bna', 'C05p27050' => 'bna', 'C06p08750' => 'bna', 'C06p11490' => 'bna', 'C07p02820' => 'bna', 'C07p17180' => 'bna', 'C07p29440' => 'bna', 'C07p63730' => 'bna', 'C09p39260' => 'bna', 'CAN.G1164.34' => 'can', 'CAN.G1164.39' => 'can', 'CAN.G1530.3' => 'can', 'CAN.G162.61' => 'can', 'CAN.G176.6' => 'can', 'CAN.G289.49' => 'can', 'CAN.G370.21' => 'can', 'CAN.G370.22' => 'can', 'CAN.G371.117' => 'can', 'CAN.G58.37' => 'can', 'CAN.G588.98' => 'can', 'CANSAT21G2266' => 'cansat', 'CANSAT25G2799' => 'cansat', 'CANSAT35G0862' => 'cansat', 'CANSAT35G1704' => 'cansat', 'CANSAT35G1760' => 'cansat', 'CANSAT56G3971' => 'cansat', 'CANSAT56G4116' => 'cansat', 'CANSAT80G1259' => 'cansat', 'CARHR027730' => 'chi', 'CARHR033880' => 'chi', 'CARHR043270' => 'chi', 'CARHR145330' => 'chi', 'CARHR145340' => 'chi', 'CARHR175570' => 'chi', 'CARHR181570' => 'chi', 'CARHR258470' => 'chi', 'CARHR260490' => 'chi', 'CARHR294220' => 'chi', 'Carub.0001s2668' => 'cru', 'Carub.0001s3257' => 'cru', 'Carub.0001s4220' => 'cru', 'Carub.0005s0179' => 'cru', 'Carub.0006s2807' => 'cru', 'Carub.0007s0039' => 'cru', 'Carub.0008s0169' => 'cru', 'Carub.0008s0636' => 'cru', 'Ca_00338_v3' => 'car', 'Ca_00542_v3' => 'car', 'Ca_01844_v3' => 'car', 'Ca_10611_v3' => 'car', 'Ca_13326_v3' => 'car', 'Ca_17944_v3' => 'car', 'Ca_18546_v3' => 'car', 'Ca_24219_v3' => 'car', 'Ca_29972_v3' => 'car', 'CBR_g3681' => 'cbr', 'CBR_g40021' => 'cbr', 'Cc01_g08140' => 'ccan', 'Cc02_g13410' => 'ccan', 'Cc02_g37480' => 'ccan', 'Cc05_g12030' => 'ccan', 'Cc09_g03370' => 'ccan', 'Cc09_g10300' => 'ccan', 'Cc10_g03530' => 'ccan', 'Cc10_g11380' => 'ccan', 'CDE01G0176' => 'cde', 'CDE02G0675' => 'cde', 'CDE02G0942' => 'cde', 'CDE02G1153' => 'cde', 'CDE02G4177' => 'cde', 'CDE04G2117' => 'cde', 'CDE04G2736' => 'cde', 'CDE08G1161' => 'cde', 'CDE09G1238' => 'cde', 'Cfa000467' => 'cfa', 'Cfa000947' => 'cfa', 'Cfa004969' => 'cfa', 'Cfa005284' => 'cfa', 'Cfa008993' => 'cfa', 'Cfa018187' => 'cfa', 'Cfa018454' => 'cfa', 'Cfa020585' => 'cfa', 'Ciclev10000424m.g' => 'ccl', 'Ciclev10003605m.g' => 'ccl', 'Ciclev10007828m.g' => 'ccl', 'Ciclev10014620m.g' => 'ccl', 'Ciclev10015169m.g' => 'ccl', 'Ciclev10018291m.g' => 'ccl', 'Ciclev10028256m.g' => 'ccl', 'Ciclev10033822m.g' => 'ccl', 'CiPaw.05G060300' => 'cil', 'CiPaw.05G085000' => 'cil', 'CiPaw.06G083700' => 'cil', 'CiPaw.06G120300' => 'cil', 'CiPaw.09G060500' => 'cil', 'CiPaw.09G123800' => 'cil', 'CiPaw.11G169700' => 'cil', 'CiPaw.12G118300' => 'cil', 'CiPaw.15G071000' => 'cil', 'CiPaw.15G081900' => 'cil', 'ClCG01G024610' => 'cla', 'ClCG03G006070' => 'cla', 'ClCG05G019250' => 'cla', 'ClCG09G009500' => 'cla', 'ClCG11G008200' => 'cla', 'ClCG11G018080' => 'cla', 'COL.COLO4_17373' => 'col', 'COL.COLO4_22994' => 'col', 'COL.COLO4_26389' => 'col', 'COL.COLO4_27170' => 'col', 'COL.COLO4_31074' => 'col', 'COL.COLO4_31465' => 'col', 'COL.COLO4_36438' => 'col', 'COL.COLO4_36439' => 'col', 'Cpa.g.c38781' => 'cpa', 'Cpa.g.sc128.12' => 'cpa', 'Cpa.g.sc166.7' => 'cpa', 'Cpa.g.sc166.8' => 'cpa', 'Cpa.g.sc20.111' => 'cpa', 'Cpa.g.sc27.31' => 'cpa', 'Cpa.g.sc64.36' => 'cpa', 'Cpa.g.sc64.37' => 'cpa', 'Cpa.g.sc66.49' => 'cpa', 'Cpa.g.sc80.64' => 'cpa', 'CsaV3_1G012320' => 'csa', 'CsaV3_2G008480' => 'csa', 'CsaV3_2G033450' => 'csa', 'CsaV3_3G044830' => 'csa', 'CsaV3_4G033710' => 'csa', 'CsaV3_6G051730' => 'csa', 'CsaV3_7G025350' => 'csa', 'CSS0001067' => 'camsi', 'CSS0005996' => 'camsi', 'CSS0006590' => 'camsi', 'CSS0009673' => 'camsi', 'CSS0010201' => 'camsi', 'CSS0010549' => 'camsi', 'CSS0011364' => 'camsi', 'CSS0014473' => 'camsi', 'CSS0014961' => 'camsi', 'CSS0020191' => 'camsi', 'CSS0021165' => 'camsi', 'CSS0022306' => 'camsi', 'CSS0030591' => 'camsi', 'CSS0030696' => 'camsi', 'CSS0032653' => 'camsi', 'CSS0037487' => 'camsi', 'CSS0041102' => 'camsi', 'CSS0041261' => 'camsi', 'CSS0046246' => 'camsi', 'CSS0049256' => 'camsi', 'DCAR_004075' => 'dca', 'DCAR_011538' => 'dca', 'DCAR_019553' => 'dca', 'DCAR_020952' => 'dca', 'DCAR_021739' => 'dca', 'DCAR_027407' => 'dca', 'DCAR_027913' => 'dca', 'DCAR_028066' => 'dca', 'Dinv05899' => 'din', 'Dinv07563' => 'din', 'Dinv08010' => 'din', 'Dinv14125' => 'din', 'Dinv20172' => 'din', 'Dinv30743' => 'din', 'Dinv31229' => 'din', 'Dinv34162' => 'din', 'Dinv36028' => 'din', 'Dinv39368' => 'din', 'Dinv40565' => 'din', 'Dinv41706' => 'din', 'Duzib052G0089' => 'dzi', 'Duzib116G0641' => 'dzi', 'Duzib132G0069' => 'dzi', 'Duzib132G1219' => 'dzi', 'Duzib147G0278' => 'dzi', 'Duzib160G0480' => 'dzi', 'Duzib170G0661' => 'dzi', 'Duzib177G0591' => 'dzi', 'Duzib187G1353' => 'dzi', 'Duzib192G0858' => 'dzi', 'Duzib192G0883' => 'dzi', 'Duzib213G0506' => 'dzi', 'Duzib235G0289' => 'dzi', 'Duzib251G0422' => 'dzi', 'ECA232G3898' => 'eca', 'ECA233G5950' => 'eca', 'ECA234G1699' => 'eca', 'ECA234G2421' => 'eca', 'ECA236G0426' => 'eca', 'ECA236G4331' => 'eca', 'ECA248G2573' => 'eca', 'EL10Ac1g00077' => 'bvu', 'EL10Ac1g01746' => 'bvu', 'EL10Ac2g03464' => 'bvu', 'EL10Ac4g08176' => 'bvu', 'EL10Ac7g17521' => 'bvu', 'EL10Ac8g20386' => 'bvu', 'EL10Ac9g21343' => 'bvu', 'EL10Ac9g22688' => 'bvu', 'Eucgr.B03434' => 'egr', 'Eucgr.D00618' => 'egr', 'Eucgr.E02395' => 'egr', 'Eucgr.F01129' => 'egr', 'Eucgr.F02622' => 'egr', 'Eucgr.F04207' => 'egr', 'FAN01G0570' => 'fan', 'FAN03G3351' => 'fan', 'FAN06G3702' => 'fan', 'FAN07G2149' => 'fan', 'FAN10G3758' => 'fan', 'FAN11G1170' => 'fan', 'FAN11G2050' => 'fan', 'FAN11G2724' => 'fan', 'FAN12G1700' => 'fan', 'FAN12G2028' => 'fan', 'FAN15G1160' => 'fan', 'FAN15G3063' => 'fan', 'FAN16G2540' => 'fan', 'FAN16G3077' => 'fan', 'FAN16G3624' => 'fan', 'FAN17G0221' => 'fan', 'FAN20G2492' => 'fan', 'FAN20G2905' => 'fan', 'FAN21G0548' => 'fan', 'FAN21G1300' => 'fan', 'FAN22G0077' => 'fan', 'FAN22G1315' => 'fan', 'FAN24G1280' => 'fan', 'FAN24G1445' => 'fan', 'FAN24G3527' => 'fan', 'FAN25G0464' => 'fan', 'FAN25G2885' => 'fan', 'FAN25G3270' => 'fan', 'FAN27G1101' => 'fan', 'FAN27G2846' => 'fan', 'FAN27G3524' => 'fan', 'FvH4_2g11770' => 'fve', 'FvH4_2g15630' => 'fve', 'FvH4_3g05570' => 'fve', 'FvH4_3g09110' => 'fve', 'FvH4_3g19940' => 'fve', 'FvH4_4g04821' => 'fve', 'FvH4_4g31480' => 'fve', 'FvH4_7g01740' => 'fve', 'Glyma.05G130400' => 'gma', 'Glyma.05G156400' => 'gma', 'Glyma.07G197000' => 'gma', 'Glyma.08G085151' => 'gma', 'Glyma.08G114500' => 'gma', 'Glyma.08G300400' => 'gma', 'Glyma.10G215800' => 'gma', 'Glyma.12G224400' => 'gma', 'Glyma.13G179300' => 'gma', 'Glyma.13G218151' => 'gma', 'Glyma.13G238800' => 'gma', 'Glyma.13G276900' => 'gma', 'Glyma.14G078200' => 'gma', 'Glyma.15G074500' => 'gma', 'Glyma.15G094100' => 'gma', 'Glyma.17G247200' => 'gma', 'Glyma.18G120100' => 'gma', 'Glyma.20G176000' => 'gma', 'Gohir.A01G063600' => 'ghi', 'Gohir.A01G170301' => 'ghi', 'Gohir.A02G060500' => 'ghi', 'Gohir.A05G133850' => 'ghi', 'Gohir.A05G161400' => 'ghi', 'Gohir.A06G012900' => 'ghi', 'Gohir.A06G035901' => 'ghi', 'Gohir.A06G127100' => 'ghi', 'Gohir.A06G210500' => 'ghi', 'Gohir.A08G008650' => 'ghi', 'Gohir.A09G072700' => 'ghi', 'Gohir.A09G088301' => 'ghi', 'Gohir.A10G040600' => 'ghi', 'Gohir.A12G036300' => 'ghi', 'Gohir.A12G143350' => 'ghi', 'Gohir.A12G165500' => 'ghi', 'Gohir.A13G145700' => 'ghi', 'Gohir.D01G050000' => 'ghi', 'Gohir.D01G051366' => 'ghi', 'Gohir.D01G161350' => 'ghi', 'Gohir.D02G065900' => 'ghi', 'Gohir.D05G164200' => 'ghi', 'Gohir.D05G355500' => 'ghi', 'Gohir.D06G010400' => 'ghi', 'Gohir.D06G111250' => 'ghi', 'Gohir.D06G132000' => 'ghi', 'Gohir.D06G210500' => 'ghi', 'Gohir.D07G165675' => 'ghi', 'Gohir.D08G062240' => 'ghi', 'Gohir.D08G086101' => 'ghi', 'Gohir.D08G138060' => 'ghi', 'Gohir.D09G072300' => 'ghi', 'Gohir.D10G041400' => 'ghi', 'Gohir.D11G191020' => 'ghi', 'Gohir.D11G212066' => 'ghi', 'Gohir.D12G036300' => 'ghi', 'Gohir.D12G168600' => 'ghi', 'Gohir.D13G150600' => 'ghi', 'Gorai.001G057300' => 'gra', 'Gorai.002G069900' => 'gra', 'Gorai.002G200000' => 'gra', 'Gorai.003G067600' => 'gra', 'Gorai.005G074800' => 'gra', 'Gorai.006G087300' => 'gra', 'Gorai.008G037500' => 'gra', 'Gorai.008G181400' => 'gra', 'Gorai.009G169400' => 'gra', 'Gorai.009G387900' => 'gra', 'Gorai.010G013300' => 'gra', 'Gorai.010G153800' => 'gra', 'Gorai.010G255800' => 'gra', 'Gorai.011G043700' => 'gra', 'Gorai.011G198900' => 'gra', 'Gorai.013G168400' => 'gra', 'GSVIVG01005212001' => 'vvi', 'GSVIVG01006163001' => 'vvi', 'GSVIVG01009625001' => 'vvi', 'GSVIVG01014338001' => 'vvi', 'GSVIVG01020005001' => 'vvi', 'GSVIVG01021450001' => 'vvi', 'GSVIVG01023975001' => 'vvi', 'GSVIVG01034490001' => 'vvi', 'HanXRQChr04g0112071' => 'han', 'HanXRQChr05g0131151' => 'han', 'HanXRQChr09g0262371' => 'han', 'HanXRQChr09g0268401' => 'han', 'HanXRQChr10g0279241' => 'han', 'HanXRQChr10g0297961' => 'han', 'HanXRQChr11g0326231' => 'han', 'HanXRQChr11g0328471' => 'han', 'HanXRQChr16g0507941' => 'han', 'HanXRQChr17g0560211' => 'han', 'Haze_02108' => 'cav', 'Haze_02428' => 'cav', 'Haze_05593' => 'cav', 'Haze_06448' => 'cav', 'Haze_09427' => 'cav', 'Haze_12022' => 'cav', 'Haze_17612' => 'cav', 'Haze_17928' => 'cav', 'Hma1.2p1_0032F.1_g019250' => 'hma', 'Hma1.2p1_0163F.1_g072690' => 'hma', 'Hma1.2p1_0265F.1_g106710' => 'hma', 'Hma1.2p1_0286F.1_g113970' => 'hma', 'Hma1.2p1_0363F.1_g136640' => 'hma', 'Hma1.2p1_0584F.1_g183470' => 'hma', 'Hma1.2p1_0885F.1_g232570' => 'hma', 'HPP92_006022' => 'vpl', 'HPP92_007320' => 'vpl', 'HPP92_011521' => 'vpl', 'HPP92_019387' => 'vpl', 'HPP92_024038' => 'vpl', 'Hund05891' => 'sun', 'Hund06450' => 'sun', 'Hund12053' => 'sun', 'Hund16800' => 'sun', 'Hund21222' => 'sun', 'Hund22896' => 'sun', 'Hund23746' => 'sun', 'Hund27083' => 'sun', 'Lalb_Chr02g0141831' => 'lal', 'Lalb_Chr02g0141841' => 'lal', 'Lalb_Chr05g0220411' => 'lal', 'Lalb_Chr06g0162081' => 'lal', 'Lalb_Chr09g0327651' => 'lal', 'Lalb_Chr13g0295051' => 'lal', 'Lalb_Chr15g0086801' => 'lal', 'Lalb_Chr16g0383781' => 'lal', 'Lalb_Chr16g0383791' => 'lal', 'Lalb_Chr18g0055441' => 'lal', 'Lalb_Chr18g0059611' => 'lal', 'Lalb_Chr20g0109661' => 'lal', 'Lalb_Chr20g0109831' => 'lal', 'Lalb_Chr20g0121871' => 'lal', 'Lalb_Chr22g0355361' => 'lal', 'Lalb_Chr25g0286371' => 'lal', 'Lj1A1187G43' => 'lonja', 'Lj1A1205T50' => 'lonja', 'Lj1A800G33' => 'lonja', 'Lj1C1187T7' => 'lonja', 'Lj1C843T11' => 'lonja', 'Lj1g0010940' => 'lja', 'Lj2A288T69' => 'lonja', 'Lj3g0024276' => 'lja', 'Lj4A47T76' => 'lonja', 'Lj4g0005805' => 'lja', 'Lj4g0006097' => 'lja', 'Lj4g0008528' => 'lja', 'Lj4g0024907' => 'lja', 'Lj5g0012472' => 'lja', 'Lj5g0018648' => 'lja', 'Lj6C789G1' => 'lonja', 'Lj6g0004000' => 'lja', 'Lj7A292G67' => 'lonja', 'Lj7A292T64' => 'lonja', 'Lj9A400T58' => 'lonja', 'Lsat_1_v5_gn_1_126181' => 'lsa', 'Lsat_1_v5_gn_4_123041' => 'lsa', 'Lsat_1_v5_gn_4_133620' => 'lsa', 'Lsat_1_v5_gn_4_53221' => 'lsa', 'Lsat_1_v5_gn_4_71961' => 'lsa', 'Lsat_1_v5_gn_7_105241' => 'lsa', 'Lsat_1_v5_gn_7_21361' => 'lsa', 'Lsat_1_v5_gn_7_28860' => 'lsa', 'Lsat_1_v5_gn_7_31260' => 'lsa', 'Lsat_1_v5_gn_8_52801' => 'lsa', 'Manes.02G191400' => 'mes', 'Manes.03G110100' => 'mes', 'Manes.04G071100' => 'mes', 'Manes.05G100500' => 'mes', 'Manes.05G164700' => 'mes', 'Manes.15G087000' => 'mes', 'Manes.15G121500' => 'mes', 'Manes.16G028300' => 'mes', 'Manes.17G046100' => 'mes', 'Manes.17G069800' => 'mes', 'Manes.18G100500' => 'mes', 'Mapoly0002s0109' => 'mpo', 'Mapoly0024s0007' => 'mpo', 'Mapoly0089s0032' => 'mpo', 'MBI04_g42241_MAGBIO' => 'mbi', 'MBI05_g11988_MAGBIO' => 'mbi', 'MBI05_g35452_MAGBIO' => 'mbi', 'MBI07_g30179_MAGBIO' => 'mbi', 'MBI07_g35859_MAGBIO' => 'mbi', 'MBI07_g35860_MAGBIO' => 'mbi', 'MBI07_g37166_MAGBIO' => 'mbi', 'MBI08_g18172_MAGBIO' => 'mbi', 'MBI09_g08441_MAGBIO' => 'mbi', 'MBI13_g01676_MAGBIO' => 'mbi', 'MBI14_g42955_MAGBIO' => 'mbi', 'MBI16_g13161_MAGBIO' => 'mbi', 'MBI17_g27204_MAGBIO' => 'mbi', 'MBI19_g21595_MAGBIO' => 'mbi', 'MD00G1148400' => 'mdo', 'MD02G1301200' => 'mdo', 'MD03G1227800' => 'mdo', 'MD05G1041100' => 'mdo', 'MD05G1124800' => 'mdo', 'MD05G1284000' => 'mdo', 'MD05G1338800' => 'mdo', 'MD05G1338900' => 'mdo', 'MD07G1022800' => 'mdo', 'MD10G1047500' => 'mdo', 'MD10G1127500' => 'mdo', 'MD10G1262300' => 'mdo', 'MD10G1293800' => 'mdo', 'MD16G1074300' => 'mdo', 'Medtr1g021670' => 'mtr', 'Medtr1g096320' => 'mtr', 'Medtr2g013690' => 'mtr', 'Medtr2g019450' => 'mtr', 'Medtr2g085170' => 'mtr', 'Medtr4g088785' => 'mtr', 'Medtr8g055930' => 'mtr', 'Medtr8g085850' => 'mtr', 'MELO3C002605.2' => 'cme', 'MELO3C003891.2' => 'cme', 'MELO3C004012.2' => 'cme', 'MELO3C007134.2' => 'cme', 'MELO3C008118.2' => 'cme', 'MELO3C016700.2' => 'cme', 'MELO3C024127.2' => 'cme', 'MELO3C033361.2' => 'cme', 'MELO3C033362.2' => 'cme', 'Migut.C00430' => 'egut', 'Migut.C01246' => 'egut', 'Migut.E00101' => 'egut', 'Migut.H01486' => 'egut', 'Migut.H01939' => 'egut', 'Migut.K00360' => 'egut', 'Migut.M00910' => 'egut', 'Migut.M01139' => 'egut', 'Migut.N02677' => 'egut', 'MSTRG.13252' => 'ama', 'MSTRG.14701' => 'ama', 'MSTRG.1521' => 'ama', 'MSTRG.15884' => 'ama', 'MSTRG.16242' => 'ama', 'MSTRG.22285' => 'ama', 'MSTRG.22444' => 'ama', 'MSTRG.2349' => 'ama', 'MSTRG.26308' => 'ama', 'MSTRG.28296' => 'ama', 'MSTRG.9895' => 'ama', 'Nitab4.5_0000110g0060' => 'nta', 'Nitab4.5_0000420g0130' => 'nta', 'Nitab4.5_0000422g0030' => 'nta', 'Nitab4.5_0000560g0180' => 'nta', 'Nitab4.5_0000703g0100' => 'nta', 'Nitab4.5_0000786g0200' => 'nta', 'Nitab4.5_0001336g0020' => 'nta', 'Nitab4.5_0001796g0030' => 'nta', 'Nitab4.5_0003348g0060' => 'nta', 'Nitab4.5_0003698g0040' => 'nta', 'Nitab4.5_0003942g0090' => 'nta', 'Nitab4.5_0004775g0070' => 'nta', 'Nitab4.5_0004864g0030' => 'nta', 'Nitab4.5_0005615g0020' => 'nta', 'Nitab4.5_0009288g0030' => 'nta', 'Nitab4.5_0009341g0010' => 'nta', 'Nitab4.5_0009535g0010' => 'nta', 'Nn1g03995' => 'nnu', 'Nn1g04100' => 'nnu', 'Nn1g06530' => 'nnu', 'Nn3g16404' => 'nnu', 'Nn3g17212' => 'nnu', 'Nn3g20776' => 'nnu', 'Nn3g21923' => 'nnu', 'Nn5g27737' => 'nnu', 'Nn5g29461' => 'nnu', 'Nn7g38355' => 'nnu', 'Nn8g39873' => 'nnu', 'Oeu000548.2' => 'oeu', 'Oeu004672.1' => 'oeu', 'Oeu015605.2' => 'oeu', 'Oeu016092.1' => 'oeu', 'Oeu017879.3' => 'oeu', 'Oeu024910.1' => 'oeu', 'Oeu028965.1' => 'oeu', 'Oeu031269.1' => 'oeu', 'Oeu031270.1' => 'oeu', 'Oeu032535.1' => 'oeu', 'Oeu034151.1' => 'oeu', 'Oeu034152.1' => 'oeu', 'Oeu034588.2' => 'oeu', 'Oeu050846.1' => 'oeu', 'Oeu050849.2' => 'oeu', 'Oeu051063.2' => 'oeu', 'Oeu052368.1' => 'oeu', 'Oeu052370.1' => 'oeu', 'Os01g0210400' => 'osa', 'Os01g0304300' => 'osa', 'Os01g0749100' => 'osa', 'Os02g0745800' => 'osa', 'Os03g0769050' => 'osa', 'Os05g0531500' => 'osa', 'Os06g0724300' => 'osa', 'Os11g0198100' => 'osa', 'Peaxi162Scf00069g01425' => 'pax', 'Peaxi162Scf00280g00811' => 'pax', 'Peaxi162Scf00310g00615' => 'pax', 'Peaxi162Scf00362g00542' => 'pax', 'Peaxi162Scf00461g00310' => 'pax', 'Peaxi162Scf00530g00118' => 'pax', 'Peaxi162Scf00541g00057' => 'pax', 'Peaxi162Scf00661g00017' => 'pax', 'Peaxi162Scf00926g00027' => 'pax', 'Peaxi162Scf01064g00263' => 'pax', 'Peaxi162Scf01211g00135' => 'pax', 'PGR004G2336' => 'pgr', 'PGR042G0327' => 'pgr', 'PGR042G1957' => 'pgr', 'PGR042G2003' => 'pgr', 'PGR042G3929' => 'pgr', 'PGR083G1137' => 'pgr', 'PGR083G1364' => 'pgr', 'PGSC0003DMG400003381' => 'stu', 'PGSC0003DMG400003417' => 'stu', 'PGSC0003DMG400008981' => 'stu', 'PGSC0003DMG400012417' => 'stu', 'PGSC0003DMG400012823' => 'stu', 'PGSC0003DMG400016885' => 'stu', 'PGSC0003DMG400022812' => 'stu', 'PGSC0003DMG400029726' => 'stu', 'PGSC0003DMG401009243' => 'stu', 'PGSC0003DMG401031505' => 'stu', 'PGSC0003DMG402031505' => 'stu', 'Phvul.001G017600' => 'pvu', 'Phvul.002G193500' => 'pvu', 'Phvul.002G228900' => 'pvu', 'Phvul.002G236800' => 'pvu', 'Phvul.003G049500' => 'pvu', 'Phvul.005G072000' => 'pvu', 'Phvul.006G164800' => 'pvu', 'Phvul.006G185100' => 'pvu', 'Phvul.007G090000' => 'pvu', 'Potri.001G399800' => 'ptr', 'Potri.002G149900' => 'ptr', 'Potri.004G044100' => 'ptr', 'Potri.004G177600' => 'ptr', 'Potri.009G138000' => 'ptr', 'Potri.010G094000' => 'ptr', 'Potri.011G053000' => 'ptr', 'Potri.011G119300' => 'ptr', 'Potri.013G113700' => 'ptr', 'Potri.018G107800' => 'ptr', 'Potri.019G084100' => 'ptr', 'Pp3c14_23720' => 'ppa', 'Pp3c16_6340' => 'ppa', 'Pp3c23_13420' => 'ppa', 'Pp3c24_2740' => 'ppa', 'Pp3c25_860' => 'ppa', 'Pp3c8_21750' => 'ppa', 'Prupe.1G273000' => 'ppe', 'Prupe.1G273700' => 'ppe', 'Prupe.1G274100' => 'ppe', 'Prupe.2G023300' => 'ppe', 'Prupe.4G048000' => 'ppe', 'Prupe.4G080400' => 'ppe', 'Prupe.4G181200' => 'ppe', 'Prupe.8G056900' => 'ppe', 'Prupe.8G168700' => 'ppe', 'Psat1g189080' => 'psa', 'Psat1g204760' => 'psa', 'Psat4g175560' => 'psa', 'Psat4g177720' => 'psa', 'Psat5g244240' => 'psa', 'Psat6g010720' => 'psa', 'Psat6g187200' => 'psa', 'Psat7g072040' => 'psa', 'PSO017G3501' => 'pso', 'PSO063G2148' => 'pso', 'PSO063G5608' => 'pso', 'PSO210G6392' => 'pso', 'PSO541G2319' => 'pso', 'PSO541G2836' => 'pso', 'PSO541G4012' => 'pso', 'PSO541G6253' => 'pso', 'PSO675G0580' => 'pso', 'PSO675G0856' => 'pso', 'PSO675G5635' => 'pso', 'PSO675G9157' => 'pso', 'PSO832G1660' => 'pso', 'PSO832G1969' => 'pso', 'QL02p007186' => 'qlo', 'QL02p033904' => 'qlo', 'QL03p064391' => 'qlo', 'QL05p040593' => 'qlo', 'QL05p058242' => 'qlo', 'QL08p021825' => 'qlo', 'QL11p004981' => 'qlo', 'RcHm_v2.0_Chr1g0318301' => 'rch', 'RcHm_v2.0_Chr4g0418501' => 'rch', 'RcHm_v2.0_Chr4g0439971' => 'rch', 'RcHm_v2.0_Chr5g0008541' => 'rch', 'RcHm_v2.0_Chr5g0014101' => 'rch', 'RcHm_v2.0_Chr5g0014131' => 'rch', 'RcHm_v2.0_Chr5g0033621' => 'rch', 'RcHm_v2.0_Chr6g0272041' => 'rch', 'RcHm_v2.0_Chr6g0278831' => 'rch', 'Rhsim02G0130400' => 'rsi', 'Rhsim02G0171100' => 'rsi', 'Rhsim05G0053000' => 'rsi', 'Rhsim05G0053100' => 'rsi', 'Rhsim06G0096500' => 'rsi', 'Rhsim06G0096600' => 'rsi', 'Rhsim06G0199100' => 'rsi', 'Rhsim12G0062300' => 'rsi', 'Rhsim12G0062800' => 'rsi', 'Sabra02G0118600' => 'sbr', 'Sabra04G0027300' => 'sbr', 'Sabra04G0119500' => 'sbr', 'Sabra08G0112500' => 'sbr', 'Sabra11G0036800' => 'sbr', 'Sabra11G0103800' => 'sbr', 'Sabra13G0096300' => 'sbr', 'Sabra16G0262300' => 'sbr', 'Sabra18G0091700' => 'sbr', 'Sabra19G0095400' => 'sbr', 'SalBow6G3080' => 'sbo', 'SalBow7G1157' => 'sbo', 'SalBow7G2123' => 'sbo', 'SalBow7G2285' => 'sbo', 'SalBow7G3537' => 'sbo', 'SalBow8G2947' => 'sbo', 'SalBow8G4463' => 'sbo', 'SalBow8G5466' => 'sbo', 'Sc01g0001750' => 'sci', 'Sc02g0006640' => 'sci', 'Sc02g0006670' => 'sci', 'Sc04g0008220' => 'sci', 'Sc05g0006190' => 'sci', 'Sc08g0002760' => 'sci', 'Sc17g0006170' => 'sci', 'Sc22g0002050' => 'sci', 'Sc23g0001190' => 'sci', 'Sc24g0000980' => 'sci', 'Sed0006245' => 'sed', 'Sed0007543' => 'sed', 'Sed0009411' => 'sed', 'Sed0010765' => 'sed', 'Sed0012944' => 'sed', 'Sed0014682' => 'sed', 'Sed0016174' => 'sed', 'Sed0016796' => 'sed', 'Sed0020317' => 'sed', 'Sed0021467' => 'sed', 'SEGI_01316' => 'sgi', 'SEGI_03374' => 'sgi', 'SEGI_16265' => 'sgi', 'SEGI_18569' => 'sgi', 'SEGI_20351' => 'sgi', 'SEGI_26395' => 'sgi', 'SEGI_29469' => 'sgi', 'SEGI_34771' => 'sgi', 'SEGI_36769' => 'sgi', 'SEGI_37139' => 'sgi', 'SGA_v2.0_scaffold100G29687' => 'sas', 'SGA_v2.0_scaffold118G32472' => 'sas', 'SGA_v2.0_scaffold14G07051' => 'sas', 'SGA_v2.0_scaffold183G39845' => 'sas', 'SGA_v2.0_scaffold1G00174' => 'sas', 'SGA_v2.0_scaffold22G09714' => 'sas', 'SGA_v2.0_scaffold333G48992' => 'sas', 'SGA_v2.0_scaffold46G17491' => 'sas', 'SGA_v2.0_scaffold49G18294' => 'sas', 'SGA_v2.0_scaffold63G21658' => 'sas', 'SHI01741' => 'shi', 'SHI05771' => 'shi', 'SHI18077' => 'shi', 'SHI20525' => 'shi', 'SHI20527' => 'shi', 'SHI20528' => 'shi', 'SMO172G0185' => 'smo', 'SMO198G0020' => 'smo', 'SMO351G0006' => 'smo', 'SMO356G0118' => 'smo', 'SMO358G0296' => 'smo', 'SMO367G0079' => 'smo', 'SMO367G1277' => 'smo', 'Solyc01g014220.3' => 'sly', 'Solyc01g111770.2' => 'sly', 'Solyc02g078180.3' => 'sly', 'Solyc03g006430.3' => 'sly', 'Solyc03g006456.1' => 'sly', 'Solyc03g079860.2' => 'sly', 'Solyc04g079770.3' => 'sly', 'Solyc05g007430.4' => 'sly', 'Solyc07g063150.3' => 'sly', 'Solyc08g016620.3' => 'sly', 'Solyc09g057590.3' => 'sly', 'Solyc09g057600.1' => 'sly', 'Solyc10g009050.3' => 'sly', 'Solyc11g017420.2' => 'sly', 'Sopen01g053810' => 'spe', 'Sopen02g023040' => 'spe', 'Sopen03g002440' => 'spe', 'Sopen04g033350' => 'spe', 'Sopen05g003310' => 'spe', 'Sopen07g004050' => 'spe', 'Sopen07g031340' => 'spe', 'Sopen08g006990' => 'spe', 'Sopen10g004830' => 'spe', 'Sopen11g009370' => 'spe', 'Sp1g24450' => 'spa', 'Sp1g29670' => 'spa', 'Sp1g39600' => 'spa', 'Sp2g11080' => 'spa', 'Sp2g13970' => 'spa', 'Sp4g16130' => 'spa', 'Sp6g13080' => 'spa', 'Sp7g37270' => 'spa', 'TAR371G0065' => 'tar', 'TAR376G0340' => 'tar', 'TAR376G0435' => 'tar', 'TAR381G0002' => 'tar', 'TAR381G1236' => 'tar', 'TAR624G0055' => 'tar', 'TAR624G0324' => 'tar', 'TAR624G0696' => 'tar', 'TAR624G0906' => 'tar', 'TAR625G0107' => 'tar', 'TAR626G0015' => 'tar', 'TAR626G1356' => 'tar', 'TAR627G0888' => 'tar', 'TAR628G0399' => 'tar', 'TAR628G1327' => 'tar', 'TAR629G2831' => 'tar', 'TAR629G2874' => 'tar', 'TAR633G1432' => 'tar', 'TAR633G2771' => 'tar', 'THA.LOC104803394' => 'tha', 'THA.LOC104805153' => 'tha', 'THA.LOC104806784' => 'tha', 'THA.LOC104810473' => 'tha', 'THA.LOC104813100' => 'tha', 'THA.LOC104814215' => 'tha', 'THA.LOC104815554' => 'tha', 'THA.LOC104820544' => 'tha', 'THA.LOC104824754' => 'tha', 'THA.LOC104827717' => 'tha', 'Thecc.02G031400' => 'tca', 'Thecc.02G055900' => 'tca', 'Thecc.02G350800' => 'tca', 'Thecc.06G150900' => 'tca', 'Thecc.06G186600' => 'tca', 'Thecc.07G089600' => 'tca', 'Thecc.08G020400' => 'tca', 'Thecc.08G182100' => 'tca', 'Thhalv10000873m.g' => 'esa', 'Thhalv10004185m.g' => 'esa', 'Thhalv10006981m.g' => 'esa', 'Thhalv10007204m.g' => 'esa', 'Thhalv10011374m.g' => 'esa', 'Thhalv10013482m.g' => 'esa', 'Thhalv10017801m.g' => 'esa', 'Thhalv10024983m.g' => 'esa', 'TPR.G12072' => 'tpr', 'TPR.G15769' => 'tpr', 'TPR.G16504' => 'tpr', 'TPR.G16506' => 'tpr', 'TPR.G24345' => 'tpr', 'TPR.G26666' => 'tpr', 'TPR.G27320' => 'tpr', 'TPR.G31819' => 'tpr', 'TPR.G38879' => 'tpr', 'TPR.G39015' => 'tpr', 'TPR.G8819' => 'tpr', 'TWI09G0924' => 'twi', 'TWI12G0811' => 'twi', 'TWI12G1294' => 'twi', 'TWI31G0150' => 'twi', 'TWI36G1262' => 'twi', 'TWI38G1287' => 'twi', 'TWI38G1633' => 'twi', 'TWI38G1982' => 'twi', 'TWI39G0116' => 'twi', 'TWI60G1011' => 'twi', 'TWI63G0171' => 'twi', 'TWI73G0839' => 'twi', 'TWI79G1511' => 'twi', 'unitig_0.g915' => 'ugi', 'unitig_0.g916' => 'ugi', 'unitig_21.g20219' => 'ugi', 'unitig_21.g20416' => 'ugi', 'unitig_578.g16132' => 'ugi', 'unitig_578.g16718' => 'ugi', 'unitig_62.g23481' => 'ugi', 'unitig_744.g24535' => 'ugi', 'unitig_749.g13525' => 'ugi', 'vmacro01248' => 'vma', 'vmacro02290' => 'vma', 'vmacro10946' => 'vma', 'vmacro11865' => 'vma', 'vmacro12493' => 'vma', 'vmacro17322' => 'vma', 'vmacro21599' => 'vma', 'vmacro23041' => 'vma', 'VMungo0251G0004' => 'vmu', 'VMungo0251G2639' => 'vmu', 'VMungo0251G2967' => 'vmu', 'VMungo0540G0864' => 'vmu', 'VMungo0540G1569' => 'vmu', 'VMungo0647G0317' => 'vmu', 'VMungo0720G1373' => 'vmu', 'VMungo0720G1508' => 'vmu', 'VMungo1080G0485' => 'vmu', 'VMungo1215G3177' => 'vmu', 'Zm00001eb112600' => 'zma', 'Zm00001eb120220' => 'zma', 'Zm00001eb153240' => 'zma', 'Zm00001eb168880' => 'zma', 'Zm00001eb213920' => 'zma', 'Zm00001eb228280' => 'zma', 'Zm00001eb254580' => 'zma', 'Zm00001eb272180' => 'zma', 'Zm00001eb293190' => 'zma', 'Zm00001eb322930' => 'zma', 'Zm00001eb353360' => 'zma', 'Zm00001eb353390' => 'zma', 'Zm00001eb353430' => 'zma', 'Zm00001eb353440' => 'zma', 'Zm00001eb353780' => 'zma' ), 'gf_id' => 'HOM05D000499', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000499' ), 'data_identifier' => 'HOM05D000499', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000499', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1066', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p29780' => 'bna', 'A02p33180' => 'bna', 'A03p16470' => 'bna', 'A03p66010' => 'bna', 'A04p25970' => 'bna', 'A06p01270' => 'bna', 'A06p46080' => 'bna', 'A07p11400' => 'bna', 'A08p01840' => 'bna', 'A08p08230' => 'bna', 'A08p25740' => 'bna', 'A09p32070' => 'bna', 'A09p37830' => 'bna', 'A09p42840' => 'bna', 'A09p42850' => 'bna', 'Aa31LG10G2060' => 'aar', 'Aa31LG2G7410' => 'aar', 'Aa31LG6G10200' => 'aar', 'Aa31LG6G16680' => 'aar', 'Aa31LG6G8470' => 'aar', 'Aa31LG9G12730' => 'aar', 'Aa31LG9G13680' => 'aar', 'Aa31LG9G14920' => 'aar', 'Aa31LG9G6650' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4977' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5467' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3254' => 'aag', 'Actinidia02578' => 'ach', 'Actinidia07693' => 'ach', 'Actinidia08413' => 'ach', 'Actinidia08414' => 'ach', 'Actinidia15289' => 'ach', 'Actinidia19871' => 'ach', 'Actinidia21475' => 'ach', 'Actinidia22576' => 'ach', 'Actinidia28327' => 'ach', 'Actinidia32491' => 'ach', 'Actinidia39463' => 'ach', 'Actinidia39571' => 'ach', 'Ah.01g013750' => 'amhyb', 'Ah.01g023210' => 'amhyb', 'Ah.04g164850' => 'amhyb', 'Ah.05g178060' => 'amhyb', 'Ah.07g204270' => 'amhyb', 'Ah.07g208480' => 'amhyb', 'Ah.09g237410' => 'amhyb', 'Ah.14g089460' => 'amhyb', 'AL1G41790' => 'aly', 'AL1G49050' => 'aly', 'AL1G53810' => 'aly', 'AL1G61400' => 'aly', 'AL4G18580' => 'aly', 'AL5G12510' => 'aly', 'AL5G12540' => 'aly', 'AL6G43230' => 'aly', 'AL7G10370' => 'aly', 'AL7G19250' => 'aly', 'AL8G12240' => 'aly', 'AL8G18540' => 'aly', 'Aqoxy1G02409' => 'aox', 'Aqoxy2G03993' => 'aox', 'Aqoxy3G03357' => 'aox', 'Aqoxy4G00785' => 'aox', 'Aqoxy5G02598' => 'aox', 'Aqoxy6G00132' => 'aox', 'Aqoxy7G01776' => 'aox', 'Aqoxy7G02316' => 'aox', 'Aqoxy7G03973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.12AFKW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B8730' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27IQR1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3F75VG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3RE0GA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41TCQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.527VTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FIR39' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5W8UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DA38EV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ63HS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H1I32C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HC27T5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4M8AP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7N3CZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9UVDZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LS1NQA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT1D4B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SKC4TM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCFV76' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF9Q1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQWD9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1ZM88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WE07RT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YCK7VH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJE6Q6' => 'arhy', 'AT1G28240' => 'ath', 'AT1G34550' => 'ath', 'AT1G53040' => 'ath', 'AT2G02910' => 'ath', 'AT4G09630' => 'ath', 'AT4G38500' => 'ath', 'AT5G42660' => 'ath', 'AT5G46220' => 'ath', 'ATR0152G026' => 'atr', 'ATR0564G343' => 'atr', 'ATR0706G151' => 'atr', 'ATR0733G207' => 'atr', 'ATR0751G234' => 'atr', 'ATR0807G048' => 'atr', 'ATR1091G084' => 'atr', 'Atru.chr10.1229' => 'acertr', 'Atru.chr10.1230' => 'acertr', 'Atru.chr10.1874' => 'acertr', 'Atru.chr11.1808' => 'acertr', 'Atru.chr13.1795' => 'acertr', 'Atru.chr13.570' => 'acertr', 'Atru.chr2.2608' => 'acertr', 'Atru.chr2.2609' => 'acertr', 'Atru.chr5.3428' => 'acertr', 'Atru.chr8.1171' => 'acertr', 'AUR62004651' => 'cqu', 'AUR62008675' => 'cqu', 'AUR62010014' => 'cqu', 'AUR62013004' => 'cqu', 'AUR62014825' => 'cqu', 'AUR62015015' => 'cqu', 'AUR62015151' => 'cqu', 'AUR62017020' => 'cqu', 'AUR62019422' => 'cqu', 'AUR62023570' => 'cqu', 'AUR62025571' => 'cqu', 'AUR62029098' => 'cqu', 'AUR62033863' => 'cqu', 'AUR62034296' => 'cqu', 'AUR62040075' => 'cqu', 'BcaB02g07334' => 'bca', 'BcaB02g10575' => 'bca', 'BcaB03g12119' => 'bca', 'BcaB03g12120' => 'bca', 'BcaB03g13945' => 'bca', 'BcaB04g17123' => 'bca', 'BcaB04g17867' => 'bca', 'BcaB04g19839' => 'bca', 'BcaB07g30317' => 'bca', 'BcaB07g32432' => 'bca', 'BcaB07g33362' => 'bca', 'BcaB08g36611' => 'bca', 'BcaC01g00028' => 'bca', 'BcaC01g01356' => 'bca', 'BcaC01g02034' => 'bca', 'BcaC01g06051' => 'bca', 'BcaC03g16839' => 'bca', 'BcaC03g17176' => 'bca', 'BcaC05g26829' => 'bca', 'BcaC06g31490' => 'bca', 'BcaC06g35344' => 'bca', 'BcaC06g36570' => 'bca', 'BcaC07g37537' => 'bca', 'BcaC08g43491' => 'bca', 'BcaC08g43773' => 'bca', 'BcaNung00234' => 'bca', 'BcaNung01982' => 'bca', 'BcaNung03707' => 'bca', 'BcaNung06454' => 'bca', 'BolC2t10762H' => 'bol', 'BolC2t11191H' => 'bol', 'BolC3t14322H' => 'bol', 'BolC3t19747H' => 'bol', 'BolC3t21425H' => 'bol', 'BolC4t27800H' => 'bol', 'BolC5t31423H' => 'bol', 'BolC6t35951H' => 'bol', 'BolC6t36282H' => 'bol', 'BolC7t40678H' => 'bol', 'BolC7t40679H' => 'bol', 'BolC7t42222H' => 'bol', 'BolC7t43492H' => 'bol', 'BolC7t46785H' => 'bol', 'BolC8t47853H' => 'bol', 'BolC9t56805H' => 'bol', 'BraA02t08000Z' => 'bra', 'BraA02t08341Z' => 'bra', 'BraA03t10936Z' => 'bra', 'BraA03t15657Z' => 'bra', 'BraA04t18100Z' => 'bra', 'BraA05t20523Z' => 'bra', 'BraA06t23353Z' => 'bra', 'BraA06t27473Z' => 'bra', 'BraA06t27769Z' => 'bra', 'BraA07t28928Z' => 'bra', 'BraA08t32236Z' => 'bra', 'BraA08t32841Z' => 'bra', 'BraA08t34524Z' => 'bra', 'BraA09t38742Z' => 'bra', 'BraA09t39295Z' => 'bra', 'C02p47180' => 'bna', 'C02p50990' => 'bna', 'C03p19360' => 'bna', 'C03p74950' => 'bna', 'C03p91000' => 'bna', 'C04p63260' => 'bna', 'C05p27050' => 'bna', 'C06p08750' => 'bna', 'C06p11490' => 'bna', 'C07p02820' => 'bna', 'C07p17180' => 'bna', 'C07p29440' => 'bna', 'C07p63730' => 'bna', 'C09p39260' => 'bna', 'CAN.G1164.34' => 'can', 'CAN.G1164.39' => 'can', 'CAN.G1530.3' => 'can', 'CAN.G162.61' => 'can', 'CAN.G176.6' => 'can', 'CAN.G289.49' => 'can', 'CAN.G370.21' => 'can', 'CAN.G370.22' => 'can', 'CAN.G371.117' => 'can', 'CAN.G58.37' => 'can', 'CAN.G588.98' => 'can', 'CANSAT21G2266' => 'cansat', 'CANSAT25G2799' => 'cansat', 'CANSAT35G0862' => 'cansat', 'CANSAT35G1704' => 'cansat', 'CANSAT35G1760' => 'cansat', 'CANSAT56G3971' => 'cansat', 'CANSAT56G4116' => 'cansat', 'CANSAT80G1259' => 'cansat', 'CARHR027730' => 'chi', 'CARHR033880' => 'chi', 'CARHR043270' => 'chi', 'CARHR145330' => 'chi', 'CARHR145340' => 'chi', 'CARHR175570' => 'chi', 'CARHR181570' => 'chi', 'CARHR258470' => 'chi', 'CARHR260490' => 'chi', 'CARHR294220' => 'chi', 'Carub.0001s2668' => 'cru', 'Carub.0001s3257' => 'cru', 'Carub.0001s4220' => 'cru', 'Carub.0005s0179' => 'cru', 'Carub.0006s2807' => 'cru', 'Carub.0007s0039' => 'cru', 'Carub.0008s0169' => 'cru', 'Carub.0008s0636' => 'cru', 'Ca_00338_v3' => 'car', 'Ca_00542_v3' => 'car', 'Ca_01844_v3' => 'car', 'Ca_10611_v3' => 'car', 'Ca_13326_v3' => 'car', 'Ca_17944_v3' => 'car', 'Ca_18546_v3' => 'car', 'Ca_24219_v3' => 'car', 'Ca_29972_v3' => 'car', 'CBR_g3681' => 'cbr', 'CBR_g40021' => 'cbr', 'Cc01_g08140' => 'ccan', 'Cc02_g13410' => 'ccan', 'Cc02_g37480' => 'ccan', 'Cc05_g12030' => 'ccan', 'Cc09_g03370' => 'ccan', 'Cc09_g10300' => 'ccan', 'Cc10_g03530' => 'ccan', 'Cc10_g11380' => 'ccan', 'CDE01G0176' => 'cde', 'CDE02G0675' => 'cde', 'CDE02G0942' => 'cde', 'CDE02G1153' => 'cde', 'CDE02G4177' => 'cde', 'CDE04G2117' => 'cde', 'CDE04G2736' => 'cde', 'CDE08G1161' => 'cde', 'CDE09G1238' => 'cde', 'Cfa000467' => 'cfa', 'Cfa000947' => 'cfa', 'Cfa004969' => 'cfa', 'Cfa005284' => 'cfa', 'Cfa008993' => 'cfa', 'Cfa018187' => 'cfa', 'Cfa018454' => 'cfa', 'Cfa020585' => 'cfa', 'Ciclev10000424m.g' => 'ccl', 'Ciclev10003605m.g' => 'ccl', 'Ciclev10007828m.g' => 'ccl', 'Ciclev10014620m.g' => 'ccl', 'Ciclev10015169m.g' => 'ccl', 'Ciclev10018291m.g' => 'ccl', 'Ciclev10028256m.g' => 'ccl', 'Ciclev10033822m.g' => 'ccl', 'CiPaw.05G060300' => 'cil', 'CiPaw.05G085000' => 'cil', 'CiPaw.06G083700' => 'cil', 'CiPaw.06G120300' => 'cil', 'CiPaw.09G060500' => 'cil', 'CiPaw.09G123800' => 'cil', 'CiPaw.11G169700' => 'cil', 'CiPaw.12G118300' => 'cil', 'CiPaw.15G071000' => 'cil', 'CiPaw.15G081900' => 'cil', 'ClCG01G024610' => 'cla', 'ClCG03G006070' => 'cla', 'ClCG05G019250' => 'cla', 'ClCG09G009500' => 'cla', 'ClCG11G008200' => 'cla', 'ClCG11G018080' => 'cla', 'COL.COLO4_17373' => 'col', 'COL.COLO4_22994' => 'col', 'COL.COLO4_26389' => 'col', 'COL.COLO4_27170' => 'col', 'COL.COLO4_31074' => 'col', 'COL.COLO4_31465' => 'col', 'COL.COLO4_36438' => 'col', 'COL.COLO4_36439' => 'col', 'Cpa.g.c38781' => 'cpa', 'Cpa.g.sc128.12' => 'cpa', 'Cpa.g.sc166.7' => 'cpa', 'Cpa.g.sc166.8' => 'cpa', 'Cpa.g.sc20.111' => 'cpa', 'Cpa.g.sc27.31' => 'cpa', 'Cpa.g.sc64.36' => 'cpa', 'Cpa.g.sc64.37' => 'cpa', 'Cpa.g.sc66.49' => 'cpa', 'Cpa.g.sc80.64' => 'cpa', 'CsaV3_1G012320' => 'csa', 'CsaV3_2G008480' => 'csa', 'CsaV3_2G033450' => 'csa', 'CsaV3_3G044830' => 'csa', 'CsaV3_4G033710' => 'csa', 'CsaV3_6G051730' => 'csa', 'CsaV3_7G025350' => 'csa', 'CSS0001067' => 'camsi', 'CSS0005996' => 'camsi', 'CSS0006590' => 'camsi', 'CSS0009673' => 'camsi', 'CSS0010201' => 'camsi', 'CSS0010549' => 'camsi', 'CSS0011364' => 'camsi', 'CSS0014473' => 'camsi', 'CSS0014961' => 'camsi', 'CSS0020191' => 'camsi', 'CSS0021165' => 'camsi', 'CSS0022306' => 'camsi', 'CSS0030591' => 'camsi', 'CSS0030696' => 'camsi', 'CSS0032653' => 'camsi', 'CSS0037487' => 'camsi', 'CSS0041102' => 'camsi', 'CSS0041261' => 'camsi', 'CSS0046246' => 'camsi', 'CSS0049256' => 'camsi', 'DCAR_004075' => 'dca', 'DCAR_011538' => 'dca', 'DCAR_019553' => 'dca', 'DCAR_020952' => 'dca', 'DCAR_021739' => 'dca', 'DCAR_027407' => 'dca', 'DCAR_027913' => 'dca', 'DCAR_028066' => 'dca', 'Dinv05899' => 'din', 'Dinv07563' => 'din', 'Dinv08010' => 'din', 'Dinv14125' => 'din', 'Dinv20172' => 'din', 'Dinv30743' => 'din', 'Dinv31229' => 'din', 'Dinv34162' => 'din', 'Dinv36028' => 'din', 'Dinv39368' => 'din', 'Dinv40565' => 'din', 'Dinv41706' => 'din', 'Duzib052G0089' => 'dzi', 'Duzib116G0641' => 'dzi', 'Duzib132G0069' => 'dzi', 'Duzib132G1219' => 'dzi', 'Duzib147G0278' => 'dzi', 'Duzib160G0480' => 'dzi', 'Duzib170G0661' => 'dzi', 'Duzib177G0591' => 'dzi', 'Duzib187G1353' => 'dzi', 'Duzib192G0858' => 'dzi', 'Duzib192G0883' => 'dzi', 'Duzib213G0506' => 'dzi', 'Duzib235G0289' => 'dzi', 'Duzib251G0422' => 'dzi', 'ECA232G3898' => 'eca', 'ECA233G5950' => 'eca', 'ECA234G1699' => 'eca', 'ECA234G2421' => 'eca', 'ECA236G0426' => 'eca', 'ECA236G4331' => 'eca', 'ECA248G2573' => 'eca', 'EL10Ac1g00077' => 'bvu', 'EL10Ac1g01746' => 'bvu', 'EL10Ac2g03464' => 'bvu', 'EL10Ac4g08176' => 'bvu', 'EL10Ac7g17521' => 'bvu', 'EL10Ac8g20386' => 'bvu', 'EL10Ac9g21343' => 'bvu', 'EL10Ac9g22688' => 'bvu', 'Eucgr.B03434' => 'egr', 'Eucgr.D00618' => 'egr', 'Eucgr.E02395' => 'egr', 'Eucgr.F01129' => 'egr', 'Eucgr.F02622' => 'egr', 'Eucgr.F04207' => 'egr', 'FAN01G0570' => 'fan', 'FAN03G3351' => 'fan', 'FAN06G3702' => 'fan', 'FAN07G2149' => 'fan', 'FAN10G3758' => 'fan', 'FAN11G1170' => 'fan', 'FAN11G2050' => 'fan', 'FAN11G2724' => 'fan', 'FAN12G1700' => 'fan', 'FAN12G2028' => 'fan', 'FAN15G1160' => 'fan', 'FAN15G3063' => 'fan', 'FAN16G2540' => 'fan', 'FAN16G3077' => 'fan', 'FAN16G3624' => 'fan', 'FAN17G0221' => 'fan', 'FAN20G2492' => 'fan', 'FAN20G2905' => 'fan', 'FAN21G0548' => 'fan', 'FAN21G1300' => 'fan', 'FAN22G0077' => 'fan', 'FAN22G1315' => 'fan', 'FAN24G1280' => 'fan', 'FAN24G1445' => 'fan', 'FAN24G3527' => 'fan', 'FAN25G0464' => 'fan', 'FAN25G2885' => 'fan', 'FAN25G3270' => 'fan', 'FAN27G1101' => 'fan', 'FAN27G2846' => 'fan', 'FAN27G3524' => 'fan', 'FvH4_2g11770' => 'fve', 'FvH4_2g15630' => 'fve', 'FvH4_3g05570' => 'fve', 'FvH4_3g09110' => 'fve', 'FvH4_3g19940' => 'fve', 'FvH4_4g04821' => 'fve', 'FvH4_4g31480' => 'fve', 'FvH4_7g01740' => 'fve', 'Glyma.05G130400' => 'gma', 'Glyma.05G156400' => 'gma', 'Glyma.07G197000' => 'gma', 'Glyma.08G085151' => 'gma', 'Glyma.08G114500' => 'gma', 'Glyma.08G300400' => 'gma', 'Glyma.10G215800' => 'gma', 'Glyma.12G224400' => 'gma', 'Glyma.13G179300' => 'gma', 'Glyma.13G218151' => 'gma', 'Glyma.13G238800' => 'gma', 'Glyma.13G276900' => 'gma', 'Glyma.14G078200' => 'gma', 'Glyma.15G074500' => 'gma', 'Glyma.15G094100' => 'gma', 'Glyma.17G247200' => 'gma', 'Glyma.18G120100' => 'gma', 'Glyma.20G176000' => 'gma', 'Gohir.A01G063600' => 'ghi', 'Gohir.A01G170301' => 'ghi', 'Gohir.A02G060500' => 'ghi', 'Gohir.A05G133850' => 'ghi', 'Gohir.A05G161400' => 'ghi', 'Gohir.A06G012900' => 'ghi', 'Gohir.A06G035901' => 'ghi', 'Gohir.A06G127100' => 'ghi', 'Gohir.A06G210500' => 'ghi', 'Gohir.A08G008650' => 'ghi', 'Gohir.A09G072700' => 'ghi', 'Gohir.A09G088301' => 'ghi', 'Gohir.A10G040600' => 'ghi', 'Gohir.A12G036300' => 'ghi', 'Gohir.A12G143350' => 'ghi', 'Gohir.A12G165500' => 'ghi', 'Gohir.A13G145700' => 'ghi', 'Gohir.D01G050000' => 'ghi', 'Gohir.D01G051366' => 'ghi', 'Gohir.D01G161350' => 'ghi', 'Gohir.D02G065900' => 'ghi', 'Gohir.D05G164200' => 'ghi', 'Gohir.D05G355500' => 'ghi', 'Gohir.D06G010400' => 'ghi', 'Gohir.D06G111250' => 'ghi', 'Gohir.D06G132000' => 'ghi', 'Gohir.D06G210500' => 'ghi', 'Gohir.D07G165675' => 'ghi', 'Gohir.D08G062240' => 'ghi', 'Gohir.D08G086101' => 'ghi', 'Gohir.D08G138060' => 'ghi', 'Gohir.D09G072300' => 'ghi', 'Gohir.D10G041400' => 'ghi', 'Gohir.D11G191020' => 'ghi', 'Gohir.D11G212066' => 'ghi', 'Gohir.D12G036300' => 'ghi', 'Gohir.D12G168600' => 'ghi', 'Gohir.D13G150600' => 'ghi', 'Gorai.001G057300' => 'gra', 'Gorai.002G069900' => 'gra', 'Gorai.002G200000' => 'gra', 'Gorai.003G067600' => 'gra', 'Gorai.005G074800' => 'gra', 'Gorai.006G087300' => 'gra', 'Gorai.008G037500' => 'gra', 'Gorai.008G181400' => 'gra', 'Gorai.009G169400' => 'gra', 'Gorai.009G387900' => 'gra', 'Gorai.010G013300' => 'gra', 'Gorai.010G153800' => 'gra', 'Gorai.010G255800' => 'gra', 'Gorai.011G043700' => 'gra', 'Gorai.011G198900' => 'gra', 'Gorai.013G168400' => 'gra', 'GSVIVG01005212001' => 'vvi', 'GSVIVG01006163001' => 'vvi', 'GSVIVG01009625001' => 'vvi', 'GSVIVG01014338001' => 'vvi', 'GSVIVG01020005001' => 'vvi', 'GSVIVG01021450001' => 'vvi', 'GSVIVG01023975001' => 'vvi', 'GSVIVG01034490001' => 'vvi', 'HanXRQChr04g0112071' => 'han', 'HanXRQChr05g0131151' => 'han', 'HanXRQChr09g0262371' => 'han', 'HanXRQChr09g0268401' => 'han', 'HanXRQChr10g0279241' => 'han', 'HanXRQChr10g0297961' => 'han', 'HanXRQChr11g0326231' => 'han', 'HanXRQChr11g0328471' => 'han', 'HanXRQChr16g0507941' => 'han', 'HanXRQChr17g0560211' => 'han', 'Haze_02108' => 'cav', 'Haze_02428' => 'cav', 'Haze_05593' => 'cav', 'Haze_06448' => 'cav', 'Haze_09427' => 'cav', 'Haze_12022' => 'cav', 'Haze_17612' => 'cav', 'Haze_17928' => 'cav', 'Hma1.2p1_0032F.1_g019250' => 'hma', 'Hma1.2p1_0163F.1_g072690' => 'hma', 'Hma1.2p1_0265F.1_g106710' => 'hma', 'Hma1.2p1_0286F.1_g113970' => 'hma', 'Hma1.2p1_0363F.1_g136640' => 'hma', 'Hma1.2p1_0584F.1_g183470' => 'hma', 'Hma1.2p1_0885F.1_g232570' => 'hma', 'HPP92_006022' => 'vpl', 'HPP92_007320' => 'vpl', 'HPP92_011521' => 'vpl', 'HPP92_019387' => 'vpl', 'HPP92_024038' => 'vpl', 'Hund05891' => 'sun', 'Hund06450' => 'sun', 'Hund12053' => 'sun', 'Hund16800' => 'sun', 'Hund21222' => 'sun', 'Hund22896' => 'sun', 'Hund23746' => 'sun', 'Hund27083' => 'sun', 'Lalb_Chr02g0141831' => 'lal', 'Lalb_Chr02g0141841' => 'lal', 'Lalb_Chr05g0220411' => 'lal', 'Lalb_Chr06g0162081' => 'lal', 'Lalb_Chr09g0327651' => 'lal', 'Lalb_Chr13g0295051' => 'lal', 'Lalb_Chr15g0086801' => 'lal', 'Lalb_Chr16g0383781' => 'lal', 'Lalb_Chr16g0383791' => 'lal', 'Lalb_Chr18g0055441' => 'lal', 'Lalb_Chr18g0059611' => 'lal', 'Lalb_Chr20g0109661' => 'lal', 'Lalb_Chr20g0109831' => 'lal', 'Lalb_Chr20g0121871' => 'lal', 'Lalb_Chr22g0355361' => 'lal', 'Lalb_Chr25g0286371' => 'lal', 'Lj1A1187G43' => 'lonja', 'Lj1A1205T50' => 'lonja', 'Lj1A800G33' => 'lonja', 'Lj1C1187T7' => 'lonja', 'Lj1C843T11' => 'lonja', 'Lj1g0010940' => 'lja', 'Lj2A288T69' => 'lonja', 'Lj3g0024276' => 'lja', 'Lj4A47T76' => 'lonja', 'Lj4g0005805' => 'lja', 'Lj4g0006097' => 'lja', 'Lj4g0008528' => 'lja', 'Lj4g0024907' => 'lja', 'Lj5g0012472' => 'lja', 'Lj5g0018648' => 'lja', 'Lj6C789G1' => 'lonja', 'Lj6g0004000' => 'lja', 'Lj7A292G67' => 'lonja', 'Lj7A292T64' => 'lonja', 'Lj9A400T58' => 'lonja', 'Lsat_1_v5_gn_1_126181' => 'lsa', 'Lsat_1_v5_gn_4_123041' => 'lsa', 'Lsat_1_v5_gn_4_133620' => 'lsa', 'Lsat_1_v5_gn_4_53221' => 'lsa', 'Lsat_1_v5_gn_4_71961' => 'lsa', 'Lsat_1_v5_gn_7_105241' => 'lsa', 'Lsat_1_v5_gn_7_21361' => 'lsa', 'Lsat_1_v5_gn_7_28860' => 'lsa', 'Lsat_1_v5_gn_7_31260' => 'lsa', 'Lsat_1_v5_gn_8_52801' => 'lsa', 'Manes.02G191400' => 'mes', 'Manes.03G110100' => 'mes', 'Manes.04G071100' => 'mes', 'Manes.05G100500' => 'mes', 'Manes.05G164700' => 'mes', 'Manes.15G087000' => 'mes', 'Manes.15G121500' => 'mes', 'Manes.16G028300' => 'mes', 'Manes.17G046100' => 'mes', 'Manes.17G069800' => 'mes', 'Manes.18G100500' => 'mes', 'Mapoly0002s0109' => 'mpo', 'Mapoly0024s0007' => 'mpo', 'Mapoly0089s0032' => 'mpo', 'MBI04_g42241_MAGBIO' => 'mbi', 'MBI05_g11988_MAGBIO' => 'mbi', 'MBI05_g35452_MAGBIO' => 'mbi', 'MBI07_g30179_MAGBIO' => 'mbi', 'MBI07_g35859_MAGBIO' => 'mbi', 'MBI07_g35860_MAGBIO' => 'mbi', 'MBI07_g37166_MAGBIO' => 'mbi', 'MBI08_g18172_MAGBIO' => 'mbi', 'MBI09_g08441_MAGBIO' => 'mbi', 'MBI13_g01676_MAGBIO' => 'mbi', 'MBI14_g42955_MAGBIO' => 'mbi', 'MBI16_g13161_MAGBIO' => 'mbi', 'MBI17_g27204_MAGBIO' => 'mbi', 'MBI19_g21595_MAGBIO' => 'mbi', 'MD00G1148400' => 'mdo', 'MD02G1301200' => 'mdo', 'MD03G1227800' => 'mdo', 'MD05G1041100' => 'mdo', 'MD05G1124800' => 'mdo', 'MD05G1284000' => 'mdo', 'MD05G1338800' => 'mdo', 'MD05G1338900' => 'mdo', 'MD07G1022800' => 'mdo', 'MD10G1047500' => 'mdo', 'MD10G1127500' => 'mdo', 'MD10G1262300' => 'mdo', 'MD10G1293800' => 'mdo', 'MD16G1074300' => 'mdo', 'Medtr1g021670' => 'mtr', 'Medtr1g096320' => 'mtr', 'Medtr2g013690' => 'mtr', 'Medtr2g019450' => 'mtr', 'Medtr2g085170' => 'mtr', 'Medtr4g088785' => 'mtr', 'Medtr8g055930' => 'mtr', 'Medtr8g085850' => 'mtr', 'MELO3C002605.2' => 'cme', 'MELO3C003891.2' => 'cme', 'MELO3C004012.2' => 'cme', 'MELO3C007134.2' => 'cme', 'MELO3C008118.2' => 'cme', 'MELO3C016700.2' => 'cme', 'MELO3C024127.2' => 'cme', 'MELO3C033361.2' => 'cme', 'MELO3C033362.2' => 'cme', 'Migut.C00430' => 'egut', 'Migut.C01246' => 'egut', 'Migut.E00101' => 'egut', 'Migut.H01486' => 'egut', 'Migut.H01939' => 'egut', 'Migut.K00360' => 'egut', 'Migut.M00910' => 'egut', 'Migut.M01139' => 'egut', 'Migut.N02677' => 'egut', 'MSTRG.13252' => 'ama', 'MSTRG.14701' => 'ama', 'MSTRG.1521' => 'ama', 'MSTRG.15884' => 'ama', 'MSTRG.16242' => 'ama', 'MSTRG.22285' => 'ama', 'MSTRG.22444' => 'ama', 'MSTRG.2349' => 'ama', 'MSTRG.26308' => 'ama', 'MSTRG.28296' => 'ama', 'MSTRG.9895' => 'ama', 'Nitab4.5_0000110g0060' => 'nta', 'Nitab4.5_0000420g0130' => 'nta', 'Nitab4.5_0000422g0030' => 'nta', 'Nitab4.5_0000560g0180' => 'nta', 'Nitab4.5_0000703g0100' => 'nta', 'Nitab4.5_0000786g0200' => 'nta', 'Nitab4.5_0001336g0020' => 'nta', 'Nitab4.5_0001796g0030' => 'nta', 'Nitab4.5_0003348g0060' => 'nta', 'Nitab4.5_0003698g0040' => 'nta', 'Nitab4.5_0003942g0090' => 'nta', 'Nitab4.5_0004775g0070' => 'nta', 'Nitab4.5_0004864g0030' => 'nta', 'Nitab4.5_0005615g0020' => 'nta', 'Nitab4.5_0009288g0030' => 'nta', 'Nitab4.5_0009341g0010' => 'nta', 'Nitab4.5_0009535g0010' => 'nta', 'Nn1g03995' => 'nnu', 'Nn1g04100' => 'nnu', 'Nn1g06530' => 'nnu', 'Nn3g16404' => 'nnu', 'Nn3g17212' => 'nnu', 'Nn3g20776' => 'nnu', 'Nn3g21923' => 'nnu', 'Nn5g27737' => 'nnu', 'Nn5g29461' => 'nnu', 'Nn7g38355' => 'nnu', 'Nn8g39873' => 'nnu', 'Oeu000548.2' => 'oeu', 'Oeu004672.1' => 'oeu', 'Oeu015605.2' => 'oeu', 'Oeu016092.1' => 'oeu', 'Oeu017879.3' => 'oeu', 'Oeu024910.1' => 'oeu', 'Oeu028965.1' => 'oeu', 'Oeu031269.1' => 'oeu', 'Oeu031270.1' => 'oeu', 'Oeu032535.1' => 'oeu', 'Oeu034151.1' => 'oeu', 'Oeu034152.1' => 'oeu', 'Oeu034588.2' => 'oeu', 'Oeu050846.1' => 'oeu', 'Oeu050849.2' => 'oeu', 'Oeu051063.2' => 'oeu', 'Oeu052368.1' => 'oeu', 'Oeu052370.1' => 'oeu', 'Os01g0210400' => 'osa', 'Os01g0304300' => 'osa', 'Os01g0749100' => 'osa', 'Os02g0745800' => 'osa', 'Os03g0769050' => 'osa', 'Os05g0531500' => 'osa', 'Os06g0724300' => 'osa', 'Os11g0198100' => 'osa', 'Peaxi162Scf00069g01425' => 'pax', 'Peaxi162Scf00280g00811' => 'pax', 'Peaxi162Scf00310g00615' => 'pax', 'Peaxi162Scf00362g00542' => 'pax', 'Peaxi162Scf00461g00310' => 'pax', 'Peaxi162Scf00530g00118' => 'pax', 'Peaxi162Scf00541g00057' => 'pax', 'Peaxi162Scf00661g00017' => 'pax', 'Peaxi162Scf00926g00027' => 'pax', 'Peaxi162Scf01064g00263' => 'pax', 'Peaxi162Scf01211g00135' => 'pax', 'PGR004G2336' => 'pgr', 'PGR042G0327' => 'pgr', 'PGR042G1957' => 'pgr', 'PGR042G2003' => 'pgr', 'PGR042G3929' => 'pgr', 'PGR083G1137' => 'pgr', 'PGR083G1364' => 'pgr', 'PGSC0003DMG400003381' => 'stu', 'PGSC0003DMG400003417' => 'stu', 'PGSC0003DMG400008981' => 'stu', 'PGSC0003DMG400012417' => 'stu', 'PGSC0003DMG400012823' => 'stu', 'PGSC0003DMG400016885' => 'stu', 'PGSC0003DMG400022812' => 'stu', 'PGSC0003DMG400029726' => 'stu', 'PGSC0003DMG401009243' => 'stu', 'PGSC0003DMG401031505' => 'stu', 'PGSC0003DMG402031505' => 'stu', 'Phvul.001G017600' => 'pvu', 'Phvul.002G193500' => 'pvu', 'Phvul.002G228900' => 'pvu', 'Phvul.002G236800' => 'pvu', 'Phvul.003G049500' => 'pvu', 'Phvul.005G072000' => 'pvu', 'Phvul.006G164800' => 'pvu', 'Phvul.006G185100' => 'pvu', 'Phvul.007G090000' => 'pvu', 'Potri.001G399800' => 'ptr', 'Potri.002G149900' => 'ptr', 'Potri.004G044100' => 'ptr', 'Potri.004G177600' => 'ptr', 'Potri.009G138000' => 'ptr', 'Potri.010G094000' => 'ptr', 'Potri.011G053000' => 'ptr', 'Potri.011G119300' => 'ptr', 'Potri.013G113700' => 'ptr', 'Potri.018G107800' => 'ptr', 'Potri.019G084100' => 'ptr', 'Pp3c14_23720' => 'ppa', 'Pp3c16_6340' => 'ppa', 'Pp3c23_13420' => 'ppa', 'Pp3c24_2740' => 'ppa', 'Pp3c25_860' => 'ppa', 'Pp3c8_21750' => 'ppa', 'Prupe.1G273000' => 'ppe', 'Prupe.1G273700' => 'ppe', 'Prupe.1G274100' => 'ppe', 'Prupe.2G023300' => 'ppe', 'Prupe.4G048000' => 'ppe', 'Prupe.4G080400' => 'ppe', 'Prupe.4G181200' => 'ppe', 'Prupe.8G056900' => 'ppe', 'Prupe.8G168700' => 'ppe', 'Psat1g189080' => 'psa', 'Psat1g204760' => 'psa', 'Psat4g175560' => 'psa', 'Psat4g177720' => 'psa', 'Psat5g244240' => 'psa', 'Psat6g010720' => 'psa', 'Psat6g187200' => 'psa', 'Psat7g072040' => 'psa', 'PSO017G3501' => 'pso', 'PSO063G2148' => 'pso', 'PSO063G5608' => 'pso', 'PSO210G6392' => 'pso', 'PSO541G2319' => 'pso', 'PSO541G2836' => 'pso', 'PSO541G4012' => 'pso', 'PSO541G6253' => 'pso', 'PSO675G0580' => 'pso', 'PSO675G0856' => 'pso', 'PSO675G5635' => 'pso', 'PSO675G9157' => 'pso', 'PSO832G1660' => 'pso', 'PSO832G1969' => 'pso', 'QL02p007186' => 'qlo', 'QL02p033904' => 'qlo', 'QL03p064391' => 'qlo', 'QL05p040593' => 'qlo', 'QL05p058242' => 'qlo', 'QL08p021825' => 'qlo', 'QL11p004981' => 'qlo', 'RcHm_v2.0_Chr1g0318301' => 'rch', 'RcHm_v2.0_Chr4g0418501' => 'rch', 'RcHm_v2.0_Chr4g0439971' => 'rch', 'RcHm_v2.0_Chr5g0008541' => 'rch', 'RcHm_v2.0_Chr5g0014101' => 'rch', 'RcHm_v2.0_Chr5g0014131' => 'rch', 'RcHm_v2.0_Chr5g0033621' => 'rch', 'RcHm_v2.0_Chr6g0272041' => 'rch', 'RcHm_v2.0_Chr6g0278831' => 'rch', 'Rhsim02G0130400' => 'rsi', 'Rhsim02G0171100' => 'rsi', 'Rhsim05G0053000' => 'rsi', 'Rhsim05G0053100' => 'rsi', 'Rhsim06G0096500' => 'rsi', 'Rhsim06G0096600' => 'rsi', 'Rhsim06G0199100' => 'rsi', 'Rhsim12G0062300' => 'rsi', 'Rhsim12G0062800' => 'rsi', 'Sabra02G0118600' => 'sbr', 'Sabra04G0027300' => 'sbr', 'Sabra04G0119500' => 'sbr', 'Sabra08G0112500' => 'sbr', 'Sabra11G0036800' => 'sbr', 'Sabra11G0103800' => 'sbr', 'Sabra13G0096300' => 'sbr', 'Sabra16G0262300' => 'sbr', 'Sabra18G0091700' => 'sbr', 'Sabra19G0095400' => 'sbr', 'SalBow6G3080' => 'sbo', 'SalBow7G1157' => 'sbo', 'SalBow7G2123' => 'sbo', 'SalBow7G2285' => 'sbo', 'SalBow7G3537' => 'sbo', 'SalBow8G2947' => 'sbo', 'SalBow8G4463' => 'sbo', 'SalBow8G5466' => 'sbo', 'Sc01g0001750' => 'sci', 'Sc02g0006640' => 'sci', 'Sc02g0006670' => 'sci', 'Sc04g0008220' => 'sci', 'Sc05g0006190' => 'sci', 'Sc08g0002760' => 'sci', 'Sc17g0006170' => 'sci', 'Sc22g0002050' => 'sci', 'Sc23g0001190' => 'sci', 'Sc24g0000980' => 'sci', 'Sed0006245' => 'sed', 'Sed0007543' => 'sed', 'Sed0009411' => 'sed', 'Sed0010765' => 'sed', 'Sed0012944' => 'sed', 'Sed0014682' => 'sed', 'Sed0016174' => 'sed', 'Sed0016796' => 'sed', 'Sed0020317' => 'sed', 'Sed0021467' => 'sed', 'SEGI_01316' => 'sgi', 'SEGI_03374' => 'sgi', 'SEGI_16265' => 'sgi', 'SEGI_18569' => 'sgi', 'SEGI_20351' => 'sgi', 'SEGI_26395' => 'sgi', 'SEGI_29469' => 'sgi', 'SEGI_34771' => 'sgi', 'SEGI_36769' => 'sgi', 'SEGI_37139' => 'sgi', 'SGA_v2.0_scaffold100G29687' => 'sas', 'SGA_v2.0_scaffold118G32472' => 'sas', 'SGA_v2.0_scaffold14G07051' => 'sas', 'SGA_v2.0_scaffold183G39845' => 'sas', 'SGA_v2.0_scaffold1G00174' => 'sas', 'SGA_v2.0_scaffold22G09714' => 'sas', 'SGA_v2.0_scaffold333G48992' => 'sas', 'SGA_v2.0_scaffold46G17491' => 'sas', 'SGA_v2.0_scaffold49G18294' => 'sas', 'SGA_v2.0_scaffold63G21658' => 'sas', 'SHI01741' => 'shi', 'SHI05771' => 'shi', 'SHI18077' => 'shi', 'SHI20525' => 'shi', 'SHI20527' => 'shi', 'SHI20528' => 'shi', 'SMO172G0185' => 'smo', 'SMO198G0020' => 'smo', 'SMO351G0006' => 'smo', 'SMO356G0118' => 'smo', 'SMO358G0296' => 'smo', 'SMO367G0079' => 'smo', 'SMO367G1277' => 'smo', 'Solyc01g014220.3' => 'sly', 'Solyc01g111770.2' => 'sly', 'Solyc02g078180.3' => 'sly', 'Solyc03g006430.3' => 'sly', 'Solyc03g006456.1' => 'sly', 'Solyc03g079860.2' => 'sly', 'Solyc04g079770.3' => 'sly', 'Solyc05g007430.4' => 'sly', 'Solyc07g063150.3' => 'sly', 'Solyc08g016620.3' => 'sly', 'Solyc09g057590.3' => 'sly', 'Solyc09g057600.1' => 'sly', 'Solyc10g009050.3' => 'sly', 'Solyc11g017420.2' => 'sly', 'Sopen01g053810' => 'spe', 'Sopen02g023040' => 'spe', 'Sopen03g002440' => 'spe', 'Sopen04g033350' => 'spe', 'Sopen05g003310' => 'spe', 'Sopen07g004050' => 'spe', 'Sopen07g031340' => 'spe', 'Sopen08g006990' => 'spe', 'Sopen10g004830' => 'spe', 'Sopen11g009370' => 'spe', 'Sp1g24450' => 'spa', 'Sp1g29670' => 'spa', 'Sp1g39600' => 'spa', 'Sp2g11080' => 'spa', 'Sp2g13970' => 'spa', 'Sp4g16130' => 'spa', 'Sp6g13080' => 'spa', 'Sp7g37270' => 'spa', 'TAR371G0065' => 'tar', 'TAR376G0340' => 'tar', 'TAR376G0435' => 'tar', 'TAR381G0002' => 'tar', 'TAR381G1236' => 'tar', 'TAR624G0055' => 'tar', 'TAR624G0324' => 'tar', 'TAR624G0696' => 'tar', 'TAR624G0906' => 'tar', 'TAR625G0107' => 'tar', 'TAR626G0015' => 'tar', 'TAR626G1356' => 'tar', 'TAR627G0888' => 'tar', 'TAR628G0399' => 'tar', 'TAR628G1327' => 'tar', 'TAR629G2831' => 'tar', 'TAR629G2874' => 'tar', 'TAR633G1432' => 'tar', 'TAR633G2771' => 'tar', 'THA.LOC104803394' => 'tha', 'THA.LOC104805153' => 'tha', 'THA.LOC104806784' => 'tha', 'THA.LOC104810473' => 'tha', 'THA.LOC104813100' => 'tha', 'THA.LOC104814215' => 'tha', 'THA.LOC104815554' => 'tha', 'THA.LOC104820544' => 'tha', 'THA.LOC104824754' => 'tha', 'THA.LOC104827717' => 'tha', 'Thecc.02G031400' => 'tca', 'Thecc.02G055900' => 'tca', 'Thecc.02G350800' => 'tca', 'Thecc.06G150900' => 'tca', 'Thecc.06G186600' => 'tca', 'Thecc.07G089600' => 'tca', 'Thecc.08G020400' => 'tca', 'Thecc.08G182100' => 'tca', 'Thhalv10000873m.g' => 'esa', 'Thhalv10004185m.g' => 'esa', 'Thhalv10006981m.g' => 'esa', 'Thhalv10007204m.g' => 'esa', 'Thhalv10011374m.g' => 'esa', 'Thhalv10013482m.g' => 'esa', 'Thhalv10017801m.g' => 'esa', 'Thhalv10024983m.g' => 'esa', 'TPR.G12072' => 'tpr', 'TPR.G15769' => 'tpr', 'TPR.G16504' => 'tpr', 'TPR.G16506' => 'tpr', 'TPR.G24345' => 'tpr', 'TPR.G26666' => 'tpr', 'TPR.G27320' => 'tpr', 'TPR.G31819' => 'tpr', 'TPR.G38879' => 'tpr', 'TPR.G39015' => 'tpr', 'TPR.G8819' => 'tpr', 'TWI09G0924' => 'twi', 'TWI12G0811' => 'twi', 'TWI12G1294' => 'twi', 'TWI31G0150' => 'twi', 'TWI36G1262' => 'twi', 'TWI38G1287' => 'twi', 'TWI38G1633' => 'twi', 'TWI38G1982' => 'twi', 'TWI39G0116' => 'twi', 'TWI60G1011' => 'twi', 'TWI63G0171' => 'twi', 'TWI73G0839' => 'twi', 'TWI79G1511' => 'twi', 'unitig_0.g915' => 'ugi', 'unitig_0.g916' => 'ugi', 'unitig_21.g20219' => 'ugi', 'unitig_21.g20416' => 'ugi', 'unitig_578.g16132' => 'ugi', 'unitig_578.g16718' => 'ugi', 'unitig_62.g23481' => 'ugi', 'unitig_744.g24535' => 'ugi', 'unitig_749.g13525' => 'ugi', 'vmacro01248' => 'vma', 'vmacro02290' => 'vma', 'vmacro10946' => 'vma', 'vmacro11865' => 'vma', 'vmacro12493' => 'vma', 'vmacro17322' => 'vma', 'vmacro21599' => 'vma', 'vmacro23041' => 'vma', 'VMungo0251G0004' => 'vmu', 'VMungo0251G2639' => 'vmu', 'VMungo0251G2967' => 'vmu', 'VMungo0540G0864' => 'vmu', 'VMungo0540G1569' => 'vmu', 'VMungo0647G0317' => 'vmu', 'VMungo0720G1373' => 'vmu', 'VMungo0720G1508' => 'vmu', 'VMungo1080G0485' => 'vmu', 'VMungo1215G3177' => 'vmu', 'Zm00001eb112600' => 'zma', 'Zm00001eb120220' => 'zma', 'Zm00001eb153240' => 'zma', 'Zm00001eb168880' => 'zma', 'Zm00001eb213920' => 'zma', 'Zm00001eb228280' => 'zma', 'Zm00001eb254580' => 'zma', 'Zm00001eb272180' => 'zma', 'Zm00001eb293190' => 'zma', 'Zm00001eb322930' => 'zma', 'Zm00001eb353360' => 'zma', 'Zm00001eb353390' => 'zma', 'Zm00001eb353430' => 'zma', 'Zm00001eb353440' => 'zma', 'Zm00001eb353780' => 'zma' ) $gf_id = 'HOM05D000499' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000499' ) $data_identifier = 'HOM05D000499' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 29, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 12, 'amhyb' => (int) 8, 'aly' => (int) 12, 'aox' => (int) 9, 'arhy' => (int) 26, 'ath' => (int) 8, 'atr' => (int) 7, 'acertr' => (int) 10, 'cqu' => (int) 15, 'bca' => (int) 29, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 11, 'cansat' => (int) 8, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 9, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 8, 'cpa' => (int) 10, 'csa' => (int) 7, 'camsi' => (int) 20, 'dca' => (int) 8, 'din' => (int) 12, 'dzi' => (int) 14, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 6, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 38, 'gra' => (int) 16, 'vvi' => (int) 8, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 5, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 11, 'lja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 11, 'mpo' => (int) 3, 'mbi' => (int) 14, 'mdo' => (int) 14, 'mtr' => (int) 8, 'cme' => (int) 9, 'egut' => (int) 9, 'ama' => (int) 11, 'nta' => (int) 17, 'nnu' => (int) 11, 'oeu' => (int) 18, 'osa' => (int) 8, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 6, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 9, 'rsi' => (int) 9, 'sbr' => (int) 10, 'sbo' => (int) 8, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 10, 'sas' => (int) 10, 'shi' => (int) 6, 'smo' => (int) 7, 'sly' => (int) 14, 'spe' => (int) 10, 'spa' => (int) 8, 'tar' => (int) 19, 'tha' => (int) 10, 'tca' => (int) 8, 'esa' => (int) 8, 'tpr' => (int) 11, 'twi' => (int) 13, 'ugi' => (int) 9, 'vma' => (int) 8, 'vmu' => (int) 10, 'zma' => (int) 15 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb353780' $species_info = array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ) $local_species = 'mbi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000499', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1066', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p29780' => 'bna', 'A02p33180' => 'bna', 'A03p16470' => 'bna', 'A03p66010' => 'bna', 'A04p25970' => 'bna', 'A06p01270' => 'bna', 'A06p46080' => 'bna', 'A07p11400' => 'bna', 'A08p01840' => 'bna', 'A08p08230' => 'bna', 'A08p25740' => 'bna', 'A09p32070' => 'bna', 'A09p37830' => 'bna', 'A09p42840' => 'bna', 'A09p42850' => 'bna', 'Aa31LG10G2060' => 'aar', 'Aa31LG2G7410' => 'aar', 'Aa31LG6G10200' => 'aar', 'Aa31LG6G16680' => 'aar', 'Aa31LG6G8470' => 'aar', 'Aa31LG9G12730' => 'aar', 'Aa31LG9G13680' => 'aar', 'Aa31LG9G14920' => 'aar', 'Aa31LG9G6650' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4977' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5467' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3254' => 'aag', 'Actinidia02578' => 'ach', 'Actinidia07693' => 'ach', 'Actinidia08413' => 'ach', 'Actinidia08414' => 'ach', 'Actinidia15289' => 'ach', 'Actinidia19871' => 'ach', 'Actinidia21475' => 'ach', 'Actinidia22576' => 'ach', 'Actinidia28327' => 'ach', 'Actinidia32491' => 'ach', 'Actinidia39463' => 'ach', 'Actinidia39571' => 'ach', 'Ah.01g013750' => 'amhyb', 'Ah.01g023210' => 'amhyb', 'Ah.04g164850' => 'amhyb', 'Ah.05g178060' => 'amhyb', 'Ah.07g204270' => 'amhyb', 'Ah.07g208480' => 'amhyb', 'Ah.09g237410' => 'amhyb', 'Ah.14g089460' => 'amhyb', 'AL1G41790' => 'aly', 'AL1G49050' => 'aly', 'AL1G53810' => 'aly', 'AL1G61400' => 'aly', 'AL4G18580' => 'aly', 'AL5G12510' => 'aly', 'AL5G12540' => 'aly', 'AL6G43230' => 'aly', 'AL7G10370' => 'aly', 'AL7G19250' => 'aly', 'AL8G12240' => 'aly', 'AL8G18540' => 'aly', 'Aqoxy1G02409' => 'aox', 'Aqoxy2G03993' => 'aox', 'Aqoxy3G03357' => 'aox', 'Aqoxy4G00785' => 'aox', 'Aqoxy5G02598' => 'aox', 'Aqoxy6G00132' => 'aox', 'Aqoxy7G01776' => 'aox', 'Aqoxy7G02316' => 'aox', 'Aqoxy7G03973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.12AFKW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B8730' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27IQR1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3F75VG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3RE0GA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41TCQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.527VTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FIR39' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5W8UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DA38EV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ63HS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H1I32C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HC27T5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4M8AP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7N3CZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9UVDZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LS1NQA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT1D4B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SKC4TM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCFV76' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF9Q1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQWD9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1ZM88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WE07RT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YCK7VH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJE6Q6' => 'arhy', 'AT1G28240' => 'ath', 'AT1G34550' => 'ath', 'AT1G53040' => 'ath', 'AT2G02910' => 'ath', 'AT4G09630' => 'ath', 'AT4G38500' => 'ath', 'AT5G42660' => 'ath', 'AT5G46220' => 'ath', 'ATR0152G026' => 'atr', 'ATR0564G343' => 'atr', 'ATR0706G151' => 'atr', 'ATR0733G207' => 'atr', 'ATR0751G234' => 'atr', 'ATR0807G048' => 'atr', 'ATR1091G084' => 'atr', 'Atru.chr10.1229' => 'acertr', 'Atru.chr10.1230' => 'acertr', 'Atru.chr10.1874' => 'acertr', 'Atru.chr11.1808' => 'acertr', 'Atru.chr13.1795' => 'acertr', 'Atru.chr13.570' => 'acertr', 'Atru.chr2.2608' => 'acertr', 'Atru.chr2.2609' => 'acertr', 'Atru.chr5.3428' => 'acertr', 'Atru.chr8.1171' => 'acertr', 'AUR62004651' => 'cqu', 'AUR62008675' => 'cqu', 'AUR62010014' => 'cqu', 'AUR62013004' => 'cqu', 'AUR62014825' => 'cqu', 'AUR62015015' => 'cqu', 'AUR62015151' => 'cqu', 'AUR62017020' => 'cqu', 'AUR62019422' => 'cqu', 'AUR62023570' => 'cqu', 'AUR62025571' => 'cqu', 'AUR62029098' => 'cqu', 'AUR62033863' => 'cqu', 'AUR62034296' => 'cqu', 'AUR62040075' => 'cqu', 'BcaB02g07334' => 'bca', 'BcaB02g10575' => 'bca', 'BcaB03g12119' => 'bca', 'BcaB03g12120' => 'bca', 'BcaB03g13945' => 'bca', 'BcaB04g17123' => 'bca', 'BcaB04g17867' => 'bca', 'BcaB04g19839' => 'bca', 'BcaB07g30317' => 'bca', 'BcaB07g32432' => 'bca', 'BcaB07g33362' => 'bca', 'BcaB08g36611' => 'bca', 'BcaC01g00028' => 'bca', 'BcaC01g01356' => 'bca', 'BcaC01g02034' => 'bca', 'BcaC01g06051' => 'bca', 'BcaC03g16839' => 'bca', 'BcaC03g17176' => 'bca', 'BcaC05g26829' => 'bca', 'BcaC06g31490' => 'bca', 'BcaC06g35344' => 'bca', 'BcaC06g36570' => 'bca', 'BcaC07g37537' => 'bca', 'BcaC08g43491' => 'bca', 'BcaC08g43773' => 'bca', 'BcaNung00234' => 'bca', 'BcaNung01982' => 'bca', 'BcaNung03707' => 'bca', 'BcaNung06454' => 'bca', 'BolC2t10762H' => 'bol', 'BolC2t11191H' => 'bol', 'BolC3t14322H' => 'bol', 'BolC3t19747H' => 'bol', 'BolC3t21425H' => 'bol', 'BolC4t27800H' => 'bol', 'BolC5t31423H' => 'bol', 'BolC6t35951H' => 'bol', 'BolC6t36282H' => 'bol', 'BolC7t40678H' => 'bol', 'BolC7t40679H' => 'bol', 'BolC7t42222H' => 'bol', 'BolC7t43492H' => 'bol', 'BolC7t46785H' => 'bol', 'BolC8t47853H' => 'bol', 'BolC9t56805H' => 'bol', 'BraA02t08000Z' => 'bra', 'BraA02t08341Z' => 'bra', 'BraA03t10936Z' => 'bra', 'BraA03t15657Z' => 'bra', 'BraA04t18100Z' => 'bra', 'BraA05t20523Z' => 'bra', 'BraA06t23353Z' => 'bra', 'BraA06t27473Z' => 'bra', 'BraA06t27769Z' => 'bra', 'BraA07t28928Z' => 'bra', 'BraA08t32236Z' => 'bra', 'BraA08t32841Z' => 'bra', 'BraA08t34524Z' => 'bra', 'BraA09t38742Z' => 'bra', 'BraA09t39295Z' => 'bra', 'C02p47180' => 'bna', 'C02p50990' => 'bna', 'C03p19360' => 'bna', 'C03p74950' => 'bna', 'C03p91000' => 'bna', 'C04p63260' => 'bna', 'C05p27050' => 'bna', 'C06p08750' => 'bna', 'C06p11490' => 'bna', 'C07p02820' => 'bna', 'C07p17180' => 'bna', 'C07p29440' => 'bna', 'C07p63730' => 'bna', 'C09p39260' => 'bna', 'CAN.G1164.34' => 'can', 'CAN.G1164.39' => 'can', 'CAN.G1530.3' => 'can', 'CAN.G162.61' => 'can', 'CAN.G176.6' => 'can', 'CAN.G289.49' => 'can', 'CAN.G370.21' => 'can', 'CAN.G370.22' => 'can', 'CAN.G371.117' => 'can', 'CAN.G58.37' => 'can', 'CAN.G588.98' => 'can', 'CANSAT21G2266' => 'cansat', 'CANSAT25G2799' => 'cansat', 'CANSAT35G0862' => 'cansat', 'CANSAT35G1704' => 'cansat', 'CANSAT35G1760' => 'cansat', 'CANSAT56G3971' => 'cansat', 'CANSAT56G4116' => 'cansat', 'CANSAT80G1259' => 'cansat', 'CARHR027730' => 'chi', 'CARHR033880' => 'chi', 'CARHR043270' => 'chi', 'CARHR145330' => 'chi', 'CARHR145340' => 'chi', 'CARHR175570' => 'chi', 'CARHR181570' => 'chi', 'CARHR258470' => 'chi', 'CARHR260490' => 'chi', 'CARHR294220' => 'chi', 'Carub.0001s2668' => 'cru', 'Carub.0001s3257' => 'cru', 'Carub.0001s4220' => 'cru', 'Carub.0005s0179' => 'cru', 'Carub.0006s2807' => 'cru', 'Carub.0007s0039' => 'cru', 'Carub.0008s0169' => 'cru', 'Carub.0008s0636' => 'cru', 'Ca_00338_v3' => 'car', 'Ca_00542_v3' => 'car', 'Ca_01844_v3' => 'car', 'Ca_10611_v3' => 'car', 'Ca_13326_v3' => 'car', 'Ca_17944_v3' => 'car', 'Ca_18546_v3' => 'car', 'Ca_24219_v3' => 'car', 'Ca_29972_v3' => 'car', 'CBR_g3681' => 'cbr', 'CBR_g40021' => 'cbr', 'Cc01_g08140' => 'ccan', 'Cc02_g13410' => 'ccan', 'Cc02_g37480' => 'ccan', 'Cc05_g12030' => 'ccan', 'Cc09_g03370' => 'ccan', 'Cc09_g10300' => 'ccan', 'Cc10_g03530' => 'ccan', 'Cc10_g11380' => 'ccan', 'CDE01G0176' => 'cde', 'CDE02G0675' => 'cde', 'CDE02G0942' => 'cde', 'CDE02G1153' => 'cde', 'CDE02G4177' => 'cde', 'CDE04G2117' => 'cde', 'CDE04G2736' => 'cde', 'CDE08G1161' => 'cde', 'CDE09G1238' => 'cde', 'Cfa000467' => 'cfa', 'Cfa000947' => 'cfa', 'Cfa004969' => 'cfa', 'Cfa005284' => 'cfa', 'Cfa008993' => 'cfa', 'Cfa018187' => 'cfa', 'Cfa018454' => 'cfa', 'Cfa020585' => 'cfa', 'Ciclev10000424m.g' => 'ccl', 'Ciclev10003605m.g' => 'ccl', 'Ciclev10007828m.g' => 'ccl', 'Ciclev10014620m.g' => 'ccl', 'Ciclev10015169m.g' => 'ccl', 'Ciclev10018291m.g' => 'ccl', 'Ciclev10028256m.g' => 'ccl', 'Ciclev10033822m.g' => 'ccl', 'CiPaw.05G060300' => 'cil', 'CiPaw.05G085000' => 'cil', 'CiPaw.06G083700' => 'cil', 'CiPaw.06G120300' => 'cil', 'CiPaw.09G060500' => 'cil', 'CiPaw.09G123800' => 'cil', 'CiPaw.11G169700' => 'cil', 'CiPaw.12G118300' => 'cil', 'CiPaw.15G071000' => 'cil', 'CiPaw.15G081900' => 'cil', 'ClCG01G024610' => 'cla', 'ClCG03G006070' => 'cla', 'ClCG05G019250' => 'cla', 'ClCG09G009500' => 'cla', 'ClCG11G008200' => 'cla', 'ClCG11G018080' => 'cla', 'COL.COLO4_17373' => 'col', 'COL.COLO4_22994' => 'col', 'COL.COLO4_26389' => 'col', 'COL.COLO4_27170' => 'col', 'COL.COLO4_31074' => 'col', 'COL.COLO4_31465' => 'col', 'COL.COLO4_36438' => 'col', 'COL.COLO4_36439' => 'col', 'Cpa.g.c38781' => 'cpa', 'Cpa.g.sc128.12' => 'cpa', 'Cpa.g.sc166.7' => 'cpa', 'Cpa.g.sc166.8' => 'cpa', 'Cpa.g.sc20.111' => 'cpa', 'Cpa.g.sc27.31' => 'cpa', 'Cpa.g.sc64.36' => 'cpa', 'Cpa.g.sc64.37' => 'cpa', 'Cpa.g.sc66.49' => 'cpa', 'Cpa.g.sc80.64' => 'cpa', 'CsaV3_1G012320' => 'csa', 'CsaV3_2G008480' => 'csa', 'CsaV3_2G033450' => 'csa', 'CsaV3_3G044830' => 'csa', 'CsaV3_4G033710' => 'csa', 'CsaV3_6G051730' => 'csa', 'CsaV3_7G025350' => 'csa', 'CSS0001067' => 'camsi', 'CSS0005996' => 'camsi', 'CSS0006590' => 'camsi', 'CSS0009673' => 'camsi', 'CSS0010201' => 'camsi', 'CSS0010549' => 'camsi', 'CSS0011364' => 'camsi', 'CSS0014473' => 'camsi', 'CSS0014961' => 'camsi', 'CSS0020191' => 'camsi', 'CSS0021165' => 'camsi', 'CSS0022306' => 'camsi', 'CSS0030591' => 'camsi', 'CSS0030696' => 'camsi', 'CSS0032653' => 'camsi', 'CSS0037487' => 'camsi', 'CSS0041102' => 'camsi', 'CSS0041261' => 'camsi', 'CSS0046246' => 'camsi', 'CSS0049256' => 'camsi', 'DCAR_004075' => 'dca', 'DCAR_011538' => 'dca', 'DCAR_019553' => 'dca', 'DCAR_020952' => 'dca', 'DCAR_021739' => 'dca', 'DCAR_027407' => 'dca', 'DCAR_027913' => 'dca', 'DCAR_028066' => 'dca', 'Dinv05899' => 'din', 'Dinv07563' => 'din', 'Dinv08010' => 'din', 'Dinv14125' => 'din', 'Dinv20172' => 'din', 'Dinv30743' => 'din', 'Dinv31229' => 'din', 'Dinv34162' => 'din', 'Dinv36028' => 'din', 'Dinv39368' => 'din', 'Dinv40565' => 'din', 'Dinv41706' => 'din', 'Duzib052G0089' => 'dzi', 'Duzib116G0641' => 'dzi', 'Duzib132G0069' => 'dzi', 'Duzib132G1219' => 'dzi', 'Duzib147G0278' => 'dzi', 'Duzib160G0480' => 'dzi', 'Duzib170G0661' => 'dzi', 'Duzib177G0591' => 'dzi', 'Duzib187G1353' => 'dzi', 'Duzib192G0858' => 'dzi', 'Duzib192G0883' => 'dzi', 'Duzib213G0506' => 'dzi', 'Duzib235G0289' => 'dzi', 'Duzib251G0422' => 'dzi', 'ECA232G3898' => 'eca', 'ECA233G5950' => 'eca', 'ECA234G1699' => 'eca', 'ECA234G2421' => 'eca', 'ECA236G0426' => 'eca', 'ECA236G4331' => 'eca', 'ECA248G2573' => 'eca', 'EL10Ac1g00077' => 'bvu', 'EL10Ac1g01746' => 'bvu', 'EL10Ac2g03464' => 'bvu', 'EL10Ac4g08176' => 'bvu', 'EL10Ac7g17521' => 'bvu', 'EL10Ac8g20386' => 'bvu', 'EL10Ac9g21343' => 'bvu', 'EL10Ac9g22688' => 'bvu', 'Eucgr.B03434' => 'egr', 'Eucgr.D00618' => 'egr', 'Eucgr.E02395' => 'egr', 'Eucgr.F01129' => 'egr', 'Eucgr.F02622' => 'egr', 'Eucgr.F04207' => 'egr', 'FAN01G0570' => 'fan', 'FAN03G3351' => 'fan', 'FAN06G3702' => 'fan', 'FAN07G2149' => 'fan', 'FAN10G3758' => 'fan', 'FAN11G1170' => 'fan', 'FAN11G2050' => 'fan', 'FAN11G2724' => 'fan', 'FAN12G1700' => 'fan', 'FAN12G2028' => 'fan', 'FAN15G1160' => 'fan', 'FAN15G3063' => 'fan', 'FAN16G2540' => 'fan', 'FAN16G3077' => 'fan', 'FAN16G3624' => 'fan', 'FAN17G0221' => 'fan', 'FAN20G2492' => 'fan', 'FAN20G2905' => 'fan', 'FAN21G0548' => 'fan', 'FAN21G1300' => 'fan', 'FAN22G0077' => 'fan', 'FAN22G1315' => 'fan', 'FAN24G1280' => 'fan', 'FAN24G1445' => 'fan', 'FAN24G3527' => 'fan', 'FAN25G0464' => 'fan', 'FAN25G2885' => 'fan', 'FAN25G3270' => 'fan', 'FAN27G1101' => 'fan', 'FAN27G2846' => 'fan', 'FAN27G3524' => 'fan', 'FvH4_2g11770' => 'fve', 'FvH4_2g15630' => 'fve', 'FvH4_3g05570' => 'fve', 'FvH4_3g09110' => 'fve', 'FvH4_3g19940' => 'fve', 'FvH4_4g04821' => 'fve', 'FvH4_4g31480' => 'fve', 'FvH4_7g01740' => 'fve', 'Glyma.05G130400' => 'gma', 'Glyma.05G156400' => 'gma', 'Glyma.07G197000' => 'gma', 'Glyma.08G085151' => 'gma', 'Glyma.08G114500' => 'gma', 'Glyma.08G300400' => 'gma', 'Glyma.10G215800' => 'gma', 'Glyma.12G224400' => 'gma', 'Glyma.13G179300' => 'gma', 'Glyma.13G218151' => 'gma', 'Glyma.13G238800' => 'gma', 'Glyma.13G276900' => 'gma', 'Glyma.14G078200' => 'gma', 'Glyma.15G074500' => 'gma', 'Glyma.15G094100' => 'gma', 'Glyma.17G247200' => 'gma', 'Glyma.18G120100' => 'gma', 'Glyma.20G176000' => 'gma', 'Gohir.A01G063600' => 'ghi', 'Gohir.A01G170301' => 'ghi', 'Gohir.A02G060500' => 'ghi', 'Gohir.A05G133850' => 'ghi', 'Gohir.A05G161400' => 'ghi', 'Gohir.A06G012900' => 'ghi', 'Gohir.A06G035901' => 'ghi', 'Gohir.A06G127100' => 'ghi', 'Gohir.A06G210500' => 'ghi', 'Gohir.A08G008650' => 'ghi', 'Gohir.A09G072700' => 'ghi', 'Gohir.A09G088301' => 'ghi', 'Gohir.A10G040600' => 'ghi', 'Gohir.A12G036300' => 'ghi', 'Gohir.A12G143350' => 'ghi', 'Gohir.A12G165500' => 'ghi', 'Gohir.A13G145700' => 'ghi', 'Gohir.D01G050000' => 'ghi', 'Gohir.D01G051366' => 'ghi', 'Gohir.D01G161350' => 'ghi', 'Gohir.D02G065900' => 'ghi', 'Gohir.D05G164200' => 'ghi', 'Gohir.D05G355500' => 'ghi', 'Gohir.D06G010400' => 'ghi', 'Gohir.D06G111250' => 'ghi', 'Gohir.D06G132000' => 'ghi', 'Gohir.D06G210500' => 'ghi', 'Gohir.D07G165675' => 'ghi', 'Gohir.D08G062240' => 'ghi', 'Gohir.D08G086101' => 'ghi', 'Gohir.D08G138060' => 'ghi', 'Gohir.D09G072300' => 'ghi', 'Gohir.D10G041400' => 'ghi', 'Gohir.D11G191020' => 'ghi', 'Gohir.D11G212066' => 'ghi', 'Gohir.D12G036300' => 'ghi', 'Gohir.D12G168600' => 'ghi', 'Gohir.D13G150600' => 'ghi', 'Gorai.001G057300' => 'gra', 'Gorai.002G069900' => 'gra', 'Gorai.002G200000' => 'gra', 'Gorai.003G067600' => 'gra', 'Gorai.005G074800' => 'gra', 'Gorai.006G087300' => 'gra', 'Gorai.008G037500' => 'gra', 'Gorai.008G181400' => 'gra', 'Gorai.009G169400' => 'gra', 'Gorai.009G387900' => 'gra', 'Gorai.010G013300' => 'gra', 'Gorai.010G153800' => 'gra', 'Gorai.010G255800' => 'gra', 'Gorai.011G043700' => 'gra', 'Gorai.011G198900' => 'gra', 'Gorai.013G168400' => 'gra', 'GSVIVG01005212001' => 'vvi', 'GSVIVG01006163001' => 'vvi', 'GSVIVG01009625001' => 'vvi', 'GSVIVG01014338001' => 'vvi', 'GSVIVG01020005001' => 'vvi', 'GSVIVG01021450001' => 'vvi', 'GSVIVG01023975001' => 'vvi', 'GSVIVG01034490001' => 'vvi', 'HanXRQChr04g0112071' => 'han', 'HanXRQChr05g0131151' => 'han', 'HanXRQChr09g0262371' => 'han', 'HanXRQChr09g0268401' => 'han', 'HanXRQChr10g0279241' => 'han', 'HanXRQChr10g0297961' => 'han', 'HanXRQChr11g0326231' => 'han', 'HanXRQChr11g0328471' => 'han', 'HanXRQChr16g0507941' => 'han', 'HanXRQChr17g0560211' => 'han', 'Haze_02108' => 'cav', 'Haze_02428' => 'cav', 'Haze_05593' => 'cav', 'Haze_06448' => 'cav', 'Haze_09427' => 'cav', 'Haze_12022' => 'cav', 'Haze_17612' => 'cav', 'Haze_17928' => 'cav', 'Hma1.2p1_0032F.1_g019250' => 'hma', 'Hma1.2p1_0163F.1_g072690' => 'hma', 'Hma1.2p1_0265F.1_g106710' => 'hma', 'Hma1.2p1_0286F.1_g113970' => 'hma', 'Hma1.2p1_0363F.1_g136640' => 'hma', 'Hma1.2p1_0584F.1_g183470' => 'hma', 'Hma1.2p1_0885F.1_g232570' => 'hma', 'HPP92_006022' => 'vpl', 'HPP92_007320' => 'vpl', 'HPP92_011521' => 'vpl', 'HPP92_019387' => 'vpl', 'HPP92_024038' => 'vpl', 'Hund05891' => 'sun', 'Hund06450' => 'sun', 'Hund12053' => 'sun', 'Hund16800' => 'sun', 'Hund21222' => 'sun', 'Hund22896' => 'sun', 'Hund23746' => 'sun', 'Hund27083' => 'sun', 'Lalb_Chr02g0141831' => 'lal', 'Lalb_Chr02g0141841' => 'lal', 'Lalb_Chr05g0220411' => 'lal', 'Lalb_Chr06g0162081' => 'lal', 'Lalb_Chr09g0327651' => 'lal', 'Lalb_Chr13g0295051' => 'lal', 'Lalb_Chr15g0086801' => 'lal', 'Lalb_Chr16g0383781' => 'lal', 'Lalb_Chr16g0383791' => 'lal', 'Lalb_Chr18g0055441' => 'lal', 'Lalb_Chr18g0059611' => 'lal', 'Lalb_Chr20g0109661' => 'lal', 'Lalb_Chr20g0109831' => 'lal', 'Lalb_Chr20g0121871' => 'lal', 'Lalb_Chr22g0355361' => 'lal', 'Lalb_Chr25g0286371' => 'lal', 'Lj1A1187G43' => 'lonja', 'Lj1A1205T50' => 'lonja', 'Lj1A800G33' => 'lonja', 'Lj1C1187T7' => 'lonja', 'Lj1C843T11' => 'lonja', 'Lj1g0010940' => 'lja', 'Lj2A288T69' => 'lonja', 'Lj3g0024276' => 'lja', 'Lj4A47T76' => 'lonja', 'Lj4g0005805' => 'lja', 'Lj4g0006097' => 'lja', 'Lj4g0008528' => 'lja', 'Lj4g0024907' => 'lja', 'Lj5g0012472' => 'lja', 'Lj5g0018648' => 'lja', 'Lj6C789G1' => 'lonja', 'Lj6g0004000' => 'lja', 'Lj7A292G67' => 'lonja', 'Lj7A292T64' => 'lonja', 'Lj9A400T58' => 'lonja', 'Lsat_1_v5_gn_1_126181' => 'lsa', 'Lsat_1_v5_gn_4_123041' => 'lsa', 'Lsat_1_v5_gn_4_133620' => 'lsa', 'Lsat_1_v5_gn_4_53221' => 'lsa', 'Lsat_1_v5_gn_4_71961' => 'lsa', 'Lsat_1_v5_gn_7_105241' => 'lsa', 'Lsat_1_v5_gn_7_21361' => 'lsa', 'Lsat_1_v5_gn_7_28860' => 'lsa', 'Lsat_1_v5_gn_7_31260' => 'lsa', 'Lsat_1_v5_gn_8_52801' => 'lsa', 'Manes.02G191400' => 'mes', 'Manes.03G110100' => 'mes', 'Manes.04G071100' => 'mes', 'Manes.05G100500' => 'mes', 'Manes.05G164700' => 'mes', 'Manes.15G087000' => 'mes', 'Manes.15G121500' => 'mes', 'Manes.16G028300' => 'mes', 'Manes.17G046100' => 'mes', 'Manes.17G069800' => 'mes', 'Manes.18G100500' => 'mes', 'Mapoly0002s0109' => 'mpo', 'Mapoly0024s0007' => 'mpo', 'Mapoly0089s0032' => 'mpo', 'MBI04_g42241_MAGBIO' => 'mbi', 'MBI05_g11988_MAGBIO' => 'mbi', 'MBI05_g35452_MAGBIO' => 'mbi', 'MBI07_g30179_MAGBIO' => 'mbi', 'MBI07_g35859_MAGBIO' => 'mbi', 'MBI07_g35860_MAGBIO' => 'mbi', 'MBI07_g37166_MAGBIO' => 'mbi', 'MBI08_g18172_MAGBIO' => 'mbi', 'MBI09_g08441_MAGBIO' => 'mbi', 'MBI13_g01676_MAGBIO' => 'mbi', 'MBI14_g42955_MAGBIO' => 'mbi', 'MBI16_g13161_MAGBIO' => 'mbi', 'MBI17_g27204_MAGBIO' => 'mbi', 'MBI19_g21595_MAGBIO' => 'mbi', 'MD00G1148400' => 'mdo', 'MD02G1301200' => 'mdo', 'MD03G1227800' => 'mdo', 'MD05G1041100' => 'mdo', 'MD05G1124800' => 'mdo', 'MD05G1284000' => 'mdo', 'MD05G1338800' => 'mdo', 'MD05G1338900' => 'mdo', 'MD07G1022800' => 'mdo', 'MD10G1047500' => 'mdo', 'MD10G1127500' => 'mdo', 'MD10G1262300' => 'mdo', 'MD10G1293800' => 'mdo', 'MD16G1074300' => 'mdo', 'Medtr1g021670' => 'mtr', 'Medtr1g096320' => 'mtr', 'Medtr2g013690' => 'mtr', 'Medtr2g019450' => 'mtr', 'Medtr2g085170' => 'mtr', 'Medtr4g088785' => 'mtr', 'Medtr8g055930' => 'mtr', 'Medtr8g085850' => 'mtr', 'MELO3C002605.2' => 'cme', 'MELO3C003891.2' => 'cme', 'MELO3C004012.2' => 'cme', 'MELO3C007134.2' => 'cme', 'MELO3C008118.2' => 'cme', 'MELO3C016700.2' => 'cme', 'MELO3C024127.2' => 'cme', 'MELO3C033361.2' => 'cme', 'MELO3C033362.2' => 'cme', 'Migut.C00430' => 'egut', 'Migut.C01246' => 'egut', 'Migut.E00101' => 'egut', 'Migut.H01486' => 'egut', 'Migut.H01939' => 'egut', 'Migut.K00360' => 'egut', 'Migut.M00910' => 'egut', 'Migut.M01139' => 'egut', 'Migut.N02677' => 'egut', 'MSTRG.13252' => 'ama', 'MSTRG.14701' => 'ama', 'MSTRG.1521' => 'ama', 'MSTRG.15884' => 'ama', 'MSTRG.16242' => 'ama', 'MSTRG.22285' => 'ama', 'MSTRG.22444' => 'ama', 'MSTRG.2349' => 'ama', 'MSTRG.26308' => 'ama', 'MSTRG.28296' => 'ama', 'MSTRG.9895' => 'ama', 'Nitab4.5_0000110g0060' => 'nta', 'Nitab4.5_0000420g0130' => 'nta', 'Nitab4.5_0000422g0030' => 'nta', 'Nitab4.5_0000560g0180' => 'nta', 'Nitab4.5_0000703g0100' => 'nta', 'Nitab4.5_0000786g0200' => 'nta', 'Nitab4.5_0001336g0020' => 'nta', 'Nitab4.5_0001796g0030' => 'nta', 'Nitab4.5_0003348g0060' => 'nta', 'Nitab4.5_0003698g0040' => 'nta', 'Nitab4.5_0003942g0090' => 'nta', 'Nitab4.5_0004775g0070' => 'nta', 'Nitab4.5_0004864g0030' => 'nta', 'Nitab4.5_0005615g0020' => 'nta', 'Nitab4.5_0009288g0030' => 'nta', 'Nitab4.5_0009341g0010' => 'nta', 'Nitab4.5_0009535g0010' => 'nta', 'Nn1g03995' => 'nnu', 'Nn1g04100' => 'nnu', 'Nn1g06530' => 'nnu', 'Nn3g16404' => 'nnu', 'Nn3g17212' => 'nnu', 'Nn3g20776' => 'nnu', 'Nn3g21923' => 'nnu', 'Nn5g27737' => 'nnu', 'Nn5g29461' => 'nnu', 'Nn7g38355' => 'nnu', 'Nn8g39873' => 'nnu', 'Oeu000548.2' => 'oeu', 'Oeu004672.1' => 'oeu', 'Oeu015605.2' => 'oeu', 'Oeu016092.1' => 'oeu', 'Oeu017879.3' => 'oeu', 'Oeu024910.1' => 'oeu', 'Oeu028965.1' => 'oeu', 'Oeu031269.1' => 'oeu', 'Oeu031270.1' => 'oeu', 'Oeu032535.1' => 'oeu', 'Oeu034151.1' => 'oeu', 'Oeu034152.1' => 'oeu', 'Oeu034588.2' => 'oeu', 'Oeu050846.1' => 'oeu', 'Oeu050849.2' => 'oeu', 'Oeu051063.2' => 'oeu', 'Oeu052368.1' => 'oeu', 'Oeu052370.1' => 'oeu', 'Os01g0210400' => 'osa', 'Os01g0304300' => 'osa', 'Os01g0749100' => 'osa', 'Os02g0745800' => 'osa', 'Os03g0769050' => 'osa', 'Os05g0531500' => 'osa', 'Os06g0724300' => 'osa', 'Os11g0198100' => 'osa', 'Peaxi162Scf00069g01425' => 'pax', 'Peaxi162Scf00280g00811' => 'pax', 'Peaxi162Scf00310g00615' => 'pax', 'Peaxi162Scf00362g00542' => 'pax', 'Peaxi162Scf00461g00310' => 'pax', 'Peaxi162Scf00530g00118' => 'pax', 'Peaxi162Scf00541g00057' => 'pax', 'Peaxi162Scf00661g00017' => 'pax', 'Peaxi162Scf00926g00027' => 'pax', 'Peaxi162Scf01064g00263' => 'pax', 'Peaxi162Scf01211g00135' => 'pax', 'PGR004G2336' => 'pgr', 'PGR042G0327' => 'pgr', 'PGR042G1957' => 'pgr', 'PGR042G2003' => 'pgr', 'PGR042G3929' => 'pgr', 'PGR083G1137' => 'pgr', 'PGR083G1364' => 'pgr', 'PGSC0003DMG400003381' => 'stu', 'PGSC0003DMG400003417' => 'stu', 'PGSC0003DMG400008981' => 'stu', 'PGSC0003DMG400012417' => 'stu', 'PGSC0003DMG400012823' => 'stu', 'PGSC0003DMG400016885' => 'stu', 'PGSC0003DMG400022812' => 'stu', 'PGSC0003DMG400029726' => 'stu', 'PGSC0003DMG401009243' => 'stu', 'PGSC0003DMG401031505' => 'stu', 'PGSC0003DMG402031505' => 'stu', 'Phvul.001G017600' => 'pvu', 'Phvul.002G193500' => 'pvu', 'Phvul.002G228900' => 'pvu', 'Phvul.002G236800' => 'pvu', 'Phvul.003G049500' => 'pvu', 'Phvul.005G072000' => 'pvu', 'Phvul.006G164800' => 'pvu', 'Phvul.006G185100' => 'pvu', 'Phvul.007G090000' => 'pvu', 'Potri.001G399800' => 'ptr', 'Potri.002G149900' => 'ptr', 'Potri.004G044100' => 'ptr', 'Potri.004G177600' => 'ptr', 'Potri.009G138000' => 'ptr', 'Potri.010G094000' => 'ptr', 'Potri.011G053000' => 'ptr', 'Potri.011G119300' => 'ptr', 'Potri.013G113700' => 'ptr', 'Potri.018G107800' => 'ptr', 'Potri.019G084100' => 'ptr', 'Pp3c14_23720' => 'ppa', 'Pp3c16_6340' => 'ppa', 'Pp3c23_13420' => 'ppa', 'Pp3c24_2740' => 'ppa', 'Pp3c25_860' => 'ppa', 'Pp3c8_21750' => 'ppa', 'Prupe.1G273000' => 'ppe', 'Prupe.1G273700' => 'ppe', 'Prupe.1G274100' => 'ppe', 'Prupe.2G023300' => 'ppe', 'Prupe.4G048000' => 'ppe', 'Prupe.4G080400' => 'ppe', 'Prupe.4G181200' => 'ppe', 'Prupe.8G056900' => 'ppe', 'Prupe.8G168700' => 'ppe', 'Psat1g189080' => 'psa', 'Psat1g204760' => 'psa', 'Psat4g175560' => 'psa', 'Psat4g177720' => 'psa', 'Psat5g244240' => 'psa', 'Psat6g010720' => 'psa', 'Psat6g187200' => 'psa', 'Psat7g072040' => 'psa', 'PSO017G3501' => 'pso', 'PSO063G2148' => 'pso', 'PSO063G5608' => 'pso', 'PSO210G6392' => 'pso', 'PSO541G2319' => 'pso', 'PSO541G2836' => 'pso', 'PSO541G4012' => 'pso', 'PSO541G6253' => 'pso', 'PSO675G0580' => 'pso', 'PSO675G0856' => 'pso', 'PSO675G5635' => 'pso', 'PSO675G9157' => 'pso', 'PSO832G1660' => 'pso', 'PSO832G1969' => 'pso', 'QL02p007186' => 'qlo', 'QL02p033904' => 'qlo', 'QL03p064391' => 'qlo', 'QL05p040593' => 'qlo', 'QL05p058242' => 'qlo', 'QL08p021825' => 'qlo', 'QL11p004981' => 'qlo', 'RcHm_v2.0_Chr1g0318301' => 'rch', 'RcHm_v2.0_Chr4g0418501' => 'rch', 'RcHm_v2.0_Chr4g0439971' => 'rch', 'RcHm_v2.0_Chr5g0008541' => 'rch', 'RcHm_v2.0_Chr5g0014101' => 'rch', 'RcHm_v2.0_Chr5g0014131' => 'rch', 'RcHm_v2.0_Chr5g0033621' => 'rch', 'RcHm_v2.0_Chr6g0272041' => 'rch', 'RcHm_v2.0_Chr6g0278831' => 'rch', 'Rhsim02G0130400' => 'rsi', 'Rhsim02G0171100' => 'rsi', 'Rhsim05G0053000' => 'rsi', 'Rhsim05G0053100' => 'rsi', 'Rhsim06G0096500' => 'rsi', 'Rhsim06G0096600' => 'rsi', 'Rhsim06G0199100' => 'rsi', 'Rhsim12G0062300' => 'rsi', 'Rhsim12G0062800' => 'rsi', 'Sabra02G0118600' => 'sbr', 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'Solyc03g079860.2' => 'sly', 'Solyc04g079770.3' => 'sly', 'Solyc05g007430.4' => 'sly', 'Solyc07g063150.3' => 'sly', 'Solyc08g016620.3' => 'sly', 'Solyc09g057590.3' => 'sly', 'Solyc09g057600.1' => 'sly', 'Solyc10g009050.3' => 'sly', 'Solyc11g017420.2' => 'sly', 'Sopen01g053810' => 'spe', 'Sopen02g023040' => 'spe', 'Sopen03g002440' => 'spe', 'Sopen04g033350' => 'spe', 'Sopen05g003310' => 'spe', 'Sopen07g004050' => 'spe', 'Sopen07g031340' => 'spe', 'Sopen08g006990' => 'spe', 'Sopen10g004830' => 'spe', 'Sopen11g009370' => 'spe', 'Sp1g24450' => 'spa', 'Sp1g29670' => 'spa', 'Sp1g39600' => 'spa', 'Sp2g11080' => 'spa', 'Sp2g13970' => 'spa', 'Sp4g16130' => 'spa', 'Sp6g13080' => 'spa', 'Sp7g37270' => 'spa', 'TAR371G0065' => 'tar', 'TAR376G0340' => 'tar', 'TAR376G0435' => 'tar', 'TAR381G0002' => 'tar', 'TAR381G1236' => 'tar', 'TAR624G0055' => 'tar', 'TAR624G0324' => 'tar', 'TAR624G0696' => 'tar', 'TAR624G0906' => 'tar', 'TAR625G0107' => 'tar', 'TAR626G0015' => 'tar', 'TAR626G1356' => 'tar', 'TAR627G0888' => 'tar', 'TAR628G0399' => 'tar', 'TAR628G1327' => 'tar', 'TAR629G2831' => 'tar', 'TAR629G2874' => 'tar', 'TAR633G1432' => 'tar', 'TAR633G2771' => 'tar', 'THA.LOC104803394' => 'tha', 'THA.LOC104805153' => 'tha', 'THA.LOC104806784' => 'tha', 'THA.LOC104810473' => 'tha', 'THA.LOC104813100' => 'tha', 'THA.LOC104814215' => 'tha', 'THA.LOC104815554' => 'tha', 'THA.LOC104820544' => 'tha', 'THA.LOC104824754' => 'tha', 'THA.LOC104827717' => 'tha', 'Thecc.02G031400' => 'tca', 'Thecc.02G055900' => 'tca', 'Thecc.02G350800' => 'tca', 'Thecc.06G150900' => 'tca', 'Thecc.06G186600' => 'tca', 'Thecc.07G089600' => 'tca', 'Thecc.08G020400' => 'tca', 'Thecc.08G182100' => 'tca', 'Thhalv10000873m.g' => 'esa', 'Thhalv10004185m.g' => 'esa', 'Thhalv10006981m.g' => 'esa', 'Thhalv10007204m.g' => 'esa', 'Thhalv10011374m.g' => 'esa', 'Thhalv10013482m.g' => 'esa', 'Thhalv10017801m.g' => 'esa', 'Thhalv10024983m.g' => 'esa', 'TPR.G12072' => 'tpr', 'TPR.G15769' => 'tpr', 'TPR.G16504' => 'tpr', 'TPR.G16506' => 'tpr', 'TPR.G24345' => 'tpr', 'TPR.G26666' => 'tpr', 'TPR.G27320' => 'tpr', 'TPR.G31819' => 'tpr', 'TPR.G38879' => 'tpr', 'TPR.G39015' => 'tpr', 'TPR.G8819' => 'tpr', 'TWI09G0924' => 'twi', 'TWI12G0811' => 'twi', 'TWI12G1294' => 'twi', 'TWI31G0150' => 'twi', 'TWI36G1262' => 'twi', 'TWI38G1287' => 'twi', 'TWI38G1633' => 'twi', 'TWI38G1982' => 'twi', 'TWI39G0116' => 'twi', 'TWI60G1011' => 'twi', 'TWI63G0171' => 'twi', 'TWI73G0839' => 'twi', 'TWI79G1511' => 'twi', 'unitig_0.g915' => 'ugi', 'unitig_0.g916' => 'ugi', 'unitig_21.g20219' => 'ugi', 'unitig_21.g20416' => 'ugi', 'unitig_578.g16132' => 'ugi', 'unitig_578.g16718' => 'ugi', 'unitig_62.g23481' => 'ugi', 'unitig_744.g24535' => 'ugi', 'unitig_749.g13525' => 'ugi', 'vmacro01248' => 'vma', 'vmacro02290' => 'vma', 'vmacro10946' => 'vma', 'vmacro11865' => 'vma', 'vmacro12493' => 'vma', 'vmacro17322' => 'vma', 'vmacro21599' => 'vma', 'vmacro23041' => 'vma', 'VMungo0251G0004' => 'vmu', 'VMungo0251G2639' => 'vmu', 'VMungo0251G2967' => 'vmu', 'VMungo0540G0864' => 'vmu', 'VMungo0540G1569' => 'vmu', 'VMungo0647G0317' => 'vmu', 'VMungo0720G1373' => 'vmu', 'VMungo0720G1508' => 'vmu', 'VMungo1080G0485' => 'vmu', 'VMungo1215G3177' => 'vmu', 'Zm00001eb112600' => 'zma', 'Zm00001eb120220' => 'zma', 'Zm00001eb153240' => 'zma', 'Zm00001eb168880' => 'zma', 'Zm00001eb213920' => 'zma', 'Zm00001eb228280' => 'zma', 'Zm00001eb254580' => 'zma', 'Zm00001eb272180' => 'zma', 'Zm00001eb293190' => 'zma', 'Zm00001eb322930' => 'zma', 'Zm00001eb353360' => 'zma', 'Zm00001eb353390' => 'zma', 'Zm00001eb353430' => 'zma', 'Zm00001eb353440' => 'zma', 'Zm00001eb353780' => 'zma' ), 'gf_id' => 'HOM05D000499', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000499' ), 'data_identifier' => 'HOM05D000499', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000499', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1066', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p29780' => 'bna', 'A02p33180' => 'bna', 'A03p16470' => 'bna', 'A03p66010' => 'bna', 'A04p25970' => 'bna', 'A06p01270' => 'bna', 'A06p46080' => 'bna', 'A07p11400' => 'bna', 'A08p01840' => 'bna', 'A08p08230' => 'bna', 'A08p25740' => 'bna', 'A09p32070' => 'bna', 'A09p37830' => 'bna', 'A09p42840' => 'bna', 'A09p42850' => 'bna', 'Aa31LG10G2060' => 'aar', 'Aa31LG2G7410' => 'aar', 'Aa31LG6G10200' => 'aar', 'Aa31LG6G16680' => 'aar', 'Aa31LG6G8470' => 'aar', 'Aa31LG9G12730' => 'aar', 'Aa31LG9G13680' => 'aar', 'Aa31LG9G14920' => 'aar', 'Aa31LG9G6650' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4977' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5467' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3254' => 'aag', 'Actinidia02578' => 'ach', 'Actinidia07693' => 'ach', 'Actinidia08413' => 'ach', 'Actinidia08414' => 'ach', 'Actinidia15289' => 'ach', 'Actinidia19871' => 'ach', 'Actinidia21475' => 'ach', 'Actinidia22576' => 'ach', 'Actinidia28327' => 'ach', 'Actinidia32491' => 'ach', 'Actinidia39463' => 'ach', 'Actinidia39571' => 'ach', 'Ah.01g013750' => 'amhyb', 'Ah.01g023210' => 'amhyb', 'Ah.04g164850' => 'amhyb', 'Ah.05g178060' => 'amhyb', 'Ah.07g204270' => 'amhyb', 'Ah.07g208480' => 'amhyb', 'Ah.09g237410' => 'amhyb', 'Ah.14g089460' => 'amhyb', 'AL1G41790' => 'aly', 'AL1G49050' => 'aly', 'AL1G53810' => 'aly', 'AL1G61400' => 'aly', 'AL4G18580' => 'aly', 'AL5G12510' => 'aly', 'AL5G12540' => 'aly', 'AL6G43230' => 'aly', 'AL7G10370' => 'aly', 'AL7G19250' => 'aly', 'AL8G12240' => 'aly', 'AL8G18540' => 'aly', 'Aqoxy1G02409' => 'aox', 'Aqoxy2G03993' => 'aox', 'Aqoxy3G03357' => 'aox', 'Aqoxy4G00785' => 'aox', 'Aqoxy5G02598' => 'aox', 'Aqoxy6G00132' => 'aox', 'Aqoxy7G01776' => 'aox', 'Aqoxy7G02316' => 'aox', 'Aqoxy7G03973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.12AFKW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B8730' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27IQR1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3F75VG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3RE0GA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41TCQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.527VTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FIR39' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5W8UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DA38EV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ63HS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H1I32C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HC27T5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4M8AP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7N3CZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9UVDZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LS1NQA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT1D4B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SKC4TM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCFV76' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF9Q1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQWD9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1ZM88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WE07RT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YCK7VH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJE6Q6' => 'arhy', 'AT1G28240' => 'ath', 'AT1G34550' => 'ath', 'AT1G53040' => 'ath', 'AT2G02910' => 'ath', 'AT4G09630' => 'ath', 'AT4G38500' => 'ath', 'AT5G42660' => 'ath', 'AT5G46220' => 'ath', 'ATR0152G026' => 'atr', 'ATR0564G343' => 'atr', 'ATR0706G151' => 'atr', 'ATR0733G207' => 'atr', 'ATR0751G234' => 'atr', 'ATR0807G048' => 'atr', 'ATR1091G084' => 'atr', 'Atru.chr10.1229' => 'acertr', 'Atru.chr10.1230' => 'acertr', 'Atru.chr10.1874' => 'acertr', 'Atru.chr11.1808' => 'acertr', 'Atru.chr13.1795' => 'acertr', 'Atru.chr13.570' => 'acertr', 'Atru.chr2.2608' => 'acertr', 'Atru.chr2.2609' => 'acertr', 'Atru.chr5.3428' => 'acertr', 'Atru.chr8.1171' => 'acertr', 'AUR62004651' => 'cqu', 'AUR62008675' => 'cqu', 'AUR62010014' => 'cqu', 'AUR62013004' => 'cqu', 'AUR62014825' => 'cqu', 'AUR62015015' => 'cqu', 'AUR62015151' => 'cqu', 'AUR62017020' => 'cqu', 'AUR62019422' => 'cqu', 'AUR62023570' => 'cqu', 'AUR62025571' => 'cqu', 'AUR62029098' => 'cqu', 'AUR62033863' => 'cqu', 'AUR62034296' => 'cqu', 'AUR62040075' => 'cqu', 'BcaB02g07334' => 'bca', 'BcaB02g10575' => 'bca', 'BcaB03g12119' => 'bca', 'BcaB03g12120' => 'bca', 'BcaB03g13945' => 'bca', 'BcaB04g17123' => 'bca', 'BcaB04g17867' => 'bca', 'BcaB04g19839' => 'bca', 'BcaB07g30317' => 'bca', 'BcaB07g32432' => 'bca', 'BcaB07g33362' => 'bca', 'BcaB08g36611' => 'bca', 'BcaC01g00028' => 'bca', 'BcaC01g01356' => 'bca', 'BcaC01g02034' => 'bca', 'BcaC01g06051' => 'bca', 'BcaC03g16839' => 'bca', 'BcaC03g17176' => 'bca', 'BcaC05g26829' => 'bca', 'BcaC06g31490' => 'bca', 'BcaC06g35344' => 'bca', 'BcaC06g36570' => 'bca', 'BcaC07g37537' => 'bca', 'BcaC08g43491' => 'bca', 'BcaC08g43773' => 'bca', 'BcaNung00234' => 'bca', 'BcaNung01982' => 'bca', 'BcaNung03707' => 'bca', 'BcaNung06454' => 'bca', 'BolC2t10762H' => 'bol', 'BolC2t11191H' => 'bol', 'BolC3t14322H' => 'bol', 'BolC3t19747H' => 'bol', 'BolC3t21425H' => 'bol', 'BolC4t27800H' => 'bol', 'BolC5t31423H' => 'bol', 'BolC6t35951H' => 'bol', 'BolC6t36282H' => 'bol', 'BolC7t40678H' => 'bol', 'BolC7t40679H' => 'bol', 'BolC7t42222H' => 'bol', 'BolC7t43492H' => 'bol', 'BolC7t46785H' => 'bol', 'BolC8t47853H' => 'bol', 'BolC9t56805H' => 'bol', 'BraA02t08000Z' => 'bra', 'BraA02t08341Z' => 'bra', 'BraA03t10936Z' => 'bra', 'BraA03t15657Z' => 'bra', 'BraA04t18100Z' => 'bra', 'BraA05t20523Z' => 'bra', 'BraA06t23353Z' => 'bra', 'BraA06t27473Z' => 'bra', 'BraA06t27769Z' => 'bra', 'BraA07t28928Z' => 'bra', 'BraA08t32236Z' => 'bra', 'BraA08t32841Z' => 'bra', 'BraA08t34524Z' => 'bra', 'BraA09t38742Z' => 'bra', 'BraA09t39295Z' => 'bra', 'C02p47180' => 'bna', 'C02p50990' => 'bna', 'C03p19360' => 'bna', 'C03p74950' => 'bna', 'C03p91000' => 'bna', 'C04p63260' => 'bna', 'C05p27050' => 'bna', 'C06p08750' => 'bna', 'C06p11490' => 'bna', 'C07p02820' => 'bna', 'C07p17180' => 'bna', 'C07p29440' => 'bna', 'C07p63730' => 'bna', 'C09p39260' => 'bna', 'CAN.G1164.34' => 'can', 'CAN.G1164.39' => 'can', 'CAN.G1530.3' => 'can', 'CAN.G162.61' => 'can', 'CAN.G176.6' => 'can', 'CAN.G289.49' => 'can', 'CAN.G370.21' => 'can', 'CAN.G370.22' => 'can', 'CAN.G371.117' => 'can', 'CAN.G58.37' => 'can', 'CAN.G588.98' => 'can', 'CANSAT21G2266' => 'cansat', 'CANSAT25G2799' => 'cansat', 'CANSAT35G0862' => 'cansat', 'CANSAT35G1704' => 'cansat', 'CANSAT35G1760' => 'cansat', 'CANSAT56G3971' => 'cansat', 'CANSAT56G4116' => 'cansat', 'CANSAT80G1259' => 'cansat', 'CARHR027730' => 'chi', 'CARHR033880' => 'chi', 'CARHR043270' => 'chi', 'CARHR145330' => 'chi', 'CARHR145340' => 'chi', 'CARHR175570' => 'chi', 'CARHR181570' => 'chi', 'CARHR258470' => 'chi', 'CARHR260490' => 'chi', 'CARHR294220' => 'chi', 'Carub.0001s2668' => 'cru', 'Carub.0001s3257' => 'cru', 'Carub.0001s4220' => 'cru', 'Carub.0005s0179' => 'cru', 'Carub.0006s2807' => 'cru', 'Carub.0007s0039' => 'cru', 'Carub.0008s0169' => 'cru', 'Carub.0008s0636' => 'cru', 'Ca_00338_v3' => 'car', 'Ca_00542_v3' => 'car', 'Ca_01844_v3' => 'car', 'Ca_10611_v3' => 'car', 'Ca_13326_v3' => 'car', 'Ca_17944_v3' => 'car', 'Ca_18546_v3' => 'car', 'Ca_24219_v3' => 'car', 'Ca_29972_v3' => 'car', 'CBR_g3681' => 'cbr', 'CBR_g40021' => 'cbr', 'Cc01_g08140' => 'ccan', 'Cc02_g13410' => 'ccan', 'Cc02_g37480' => 'ccan', 'Cc05_g12030' => 'ccan', 'Cc09_g03370' => 'ccan', 'Cc09_g10300' => 'ccan', 'Cc10_g03530' => 'ccan', 'Cc10_g11380' => 'ccan', 'CDE01G0176' => 'cde', 'CDE02G0675' => 'cde', 'CDE02G0942' => 'cde', 'CDE02G1153' => 'cde', 'CDE02G4177' => 'cde', 'CDE04G2117' => 'cde', 'CDE04G2736' => 'cde', 'CDE08G1161' => 'cde', 'CDE09G1238' => 'cde', 'Cfa000467' => 'cfa', 'Cfa000947' => 'cfa', 'Cfa004969' => 'cfa', 'Cfa005284' => 'cfa', 'Cfa008993' => 'cfa', 'Cfa018187' => 'cfa', 'Cfa018454' => 'cfa', 'Cfa020585' => 'cfa', 'Ciclev10000424m.g' => 'ccl', 'Ciclev10003605m.g' => 'ccl', 'Ciclev10007828m.g' => 'ccl', 'Ciclev10014620m.g' => 'ccl', 'Ciclev10015169m.g' => 'ccl', 'Ciclev10018291m.g' => 'ccl', 'Ciclev10028256m.g' => 'ccl', 'Ciclev10033822m.g' => 'ccl', 'CiPaw.05G060300' => 'cil', 'CiPaw.05G085000' => 'cil', 'CiPaw.06G083700' => 'cil', 'CiPaw.06G120300' => 'cil', 'CiPaw.09G060500' => 'cil', 'CiPaw.09G123800' => 'cil', 'CiPaw.11G169700' => 'cil', 'CiPaw.12G118300' => 'cil', 'CiPaw.15G071000' => 'cil', 'CiPaw.15G081900' => 'cil', 'ClCG01G024610' => 'cla', 'ClCG03G006070' => 'cla', 'ClCG05G019250' => 'cla', 'ClCG09G009500' => 'cla', 'ClCG11G008200' => 'cla', 'ClCG11G018080' => 'cla', 'COL.COLO4_17373' => 'col', 'COL.COLO4_22994' => 'col', 'COL.COLO4_26389' => 'col', 'COL.COLO4_27170' => 'col', 'COL.COLO4_31074' => 'col', 'COL.COLO4_31465' => 'col', 'COL.COLO4_36438' => 'col', 'COL.COLO4_36439' => 'col', 'Cpa.g.c38781' => 'cpa', 'Cpa.g.sc128.12' => 'cpa', 'Cpa.g.sc166.7' => 'cpa', 'Cpa.g.sc166.8' => 'cpa', 'Cpa.g.sc20.111' => 'cpa', 'Cpa.g.sc27.31' => 'cpa', 'Cpa.g.sc64.36' => 'cpa', 'Cpa.g.sc64.37' => 'cpa', 'Cpa.g.sc66.49' => 'cpa', 'Cpa.g.sc80.64' => 'cpa', 'CsaV3_1G012320' => 'csa', 'CsaV3_2G008480' => 'csa', 'CsaV3_2G033450' => 'csa', 'CsaV3_3G044830' => 'csa', 'CsaV3_4G033710' => 'csa', 'CsaV3_6G051730' => 'csa', 'CsaV3_7G025350' => 'csa', 'CSS0001067' => 'camsi', 'CSS0005996' => 'camsi', 'CSS0006590' => 'camsi', 'CSS0009673' => 'camsi', 'CSS0010201' => 'camsi', 'CSS0010549' => 'camsi', 'CSS0011364' => 'camsi', 'CSS0014473' => 'camsi', 'CSS0014961' => 'camsi', 'CSS0020191' => 'camsi', 'CSS0021165' => 'camsi', 'CSS0022306' => 'camsi', 'CSS0030591' => 'camsi', 'CSS0030696' => 'camsi', 'CSS0032653' => 'camsi', 'CSS0037487' => 'camsi', 'CSS0041102' => 'camsi', 'CSS0041261' => 'camsi', 'CSS0046246' => 'camsi', 'CSS0049256' => 'camsi', 'DCAR_004075' => 'dca', 'DCAR_011538' => 'dca', 'DCAR_019553' => 'dca', 'DCAR_020952' => 'dca', 'DCAR_021739' => 'dca', 'DCAR_027407' => 'dca', 'DCAR_027913' => 'dca', 'DCAR_028066' => 'dca', 'Dinv05899' => 'din', 'Dinv07563' => 'din', 'Dinv08010' => 'din', 'Dinv14125' => 'din', 'Dinv20172' => 'din', 'Dinv30743' => 'din', 'Dinv31229' => 'din', 'Dinv34162' => 'din', 'Dinv36028' => 'din', 'Dinv39368' => 'din', 'Dinv40565' => 'din', 'Dinv41706' => 'din', 'Duzib052G0089' => 'dzi', 'Duzib116G0641' => 'dzi', 'Duzib132G0069' => 'dzi', 'Duzib132G1219' => 'dzi', 'Duzib147G0278' => 'dzi', 'Duzib160G0480' => 'dzi', 'Duzib170G0661' => 'dzi', 'Duzib177G0591' => 'dzi', 'Duzib187G1353' => 'dzi', 'Duzib192G0858' => 'dzi', 'Duzib192G0883' => 'dzi', 'Duzib213G0506' => 'dzi', 'Duzib235G0289' => 'dzi', 'Duzib251G0422' => 'dzi', 'ECA232G3898' => 'eca', 'ECA233G5950' => 'eca', 'ECA234G1699' => 'eca', 'ECA234G2421' => 'eca', 'ECA236G0426' => 'eca', 'ECA236G4331' => 'eca', 'ECA248G2573' => 'eca', 'EL10Ac1g00077' => 'bvu', 'EL10Ac1g01746' => 'bvu', 'EL10Ac2g03464' => 'bvu', 'EL10Ac4g08176' => 'bvu', 'EL10Ac7g17521' => 'bvu', 'EL10Ac8g20386' => 'bvu', 'EL10Ac9g21343' => 'bvu', 'EL10Ac9g22688' => 'bvu', 'Eucgr.B03434' => 'egr', 'Eucgr.D00618' => 'egr', 'Eucgr.E02395' => 'egr', 'Eucgr.F01129' => 'egr', 'Eucgr.F02622' => 'egr', 'Eucgr.F04207' => 'egr', 'FAN01G0570' => 'fan', 'FAN03G3351' => 'fan', 'FAN06G3702' => 'fan', 'FAN07G2149' => 'fan', 'FAN10G3758' => 'fan', 'FAN11G1170' => 'fan', 'FAN11G2050' => 'fan', 'FAN11G2724' => 'fan', 'FAN12G1700' => 'fan', 'FAN12G2028' => 'fan', 'FAN15G1160' => 'fan', 'FAN15G3063' => 'fan', 'FAN16G2540' => 'fan', 'FAN16G3077' => 'fan', 'FAN16G3624' => 'fan', 'FAN17G0221' => 'fan', 'FAN20G2492' => 'fan', 'FAN20G2905' => 'fan', 'FAN21G0548' => 'fan', 'FAN21G1300' => 'fan', 'FAN22G0077' => 'fan', 'FAN22G1315' => 'fan', 'FAN24G1280' => 'fan', 'FAN24G1445' => 'fan', 'FAN24G3527' => 'fan', 'FAN25G0464' => 'fan', 'FAN25G2885' => 'fan', 'FAN25G3270' => 'fan', 'FAN27G1101' => 'fan', 'FAN27G2846' => 'fan', 'FAN27G3524' => 'fan', 'FvH4_2g11770' => 'fve', 'FvH4_2g15630' => 'fve', 'FvH4_3g05570' => 'fve', 'FvH4_3g09110' => 'fve', 'FvH4_3g19940' => 'fve', 'FvH4_4g04821' => 'fve', 'FvH4_4g31480' => 'fve', 'FvH4_7g01740' => 'fve', 'Glyma.05G130400' => 'gma', 'Glyma.05G156400' => 'gma', 'Glyma.07G197000' => 'gma', 'Glyma.08G085151' => 'gma', 'Glyma.08G114500' => 'gma', 'Glyma.08G300400' => 'gma', 'Glyma.10G215800' => 'gma', 'Glyma.12G224400' => 'gma', 'Glyma.13G179300' => 'gma', 'Glyma.13G218151' => 'gma', 'Glyma.13G238800' => 'gma', 'Glyma.13G276900' => 'gma', 'Glyma.14G078200' => 'gma', 'Glyma.15G074500' => 'gma', 'Glyma.15G094100' => 'gma', 'Glyma.17G247200' => 'gma', 'Glyma.18G120100' => 'gma', 'Glyma.20G176000' => 'gma', 'Gohir.A01G063600' => 'ghi', 'Gohir.A01G170301' => 'ghi', 'Gohir.A02G060500' => 'ghi', 'Gohir.A05G133850' => 'ghi', 'Gohir.A05G161400' => 'ghi', 'Gohir.A06G012900' => 'ghi', 'Gohir.A06G035901' => 'ghi', 'Gohir.A06G127100' => 'ghi', 'Gohir.A06G210500' => 'ghi', 'Gohir.A08G008650' => 'ghi', 'Gohir.A09G072700' => 'ghi', 'Gohir.A09G088301' => 'ghi', 'Gohir.A10G040600' => 'ghi', 'Gohir.A12G036300' => 'ghi', 'Gohir.A12G143350' => 'ghi', 'Gohir.A12G165500' => 'ghi', 'Gohir.A13G145700' => 'ghi', 'Gohir.D01G050000' => 'ghi', 'Gohir.D01G051366' => 'ghi', 'Gohir.D01G161350' => 'ghi', 'Gohir.D02G065900' => 'ghi', 'Gohir.D05G164200' => 'ghi', 'Gohir.D05G355500' => 'ghi', 'Gohir.D06G010400' => 'ghi', 'Gohir.D06G111250' => 'ghi', 'Gohir.D06G132000' => 'ghi', 'Gohir.D06G210500' => 'ghi', 'Gohir.D07G165675' => 'ghi', 'Gohir.D08G062240' => 'ghi', 'Gohir.D08G086101' => 'ghi', 'Gohir.D08G138060' => 'ghi', 'Gohir.D09G072300' => 'ghi', 'Gohir.D10G041400' => 'ghi', 'Gohir.D11G191020' => 'ghi', 'Gohir.D11G212066' => 'ghi', 'Gohir.D12G036300' => 'ghi', 'Gohir.D12G168600' => 'ghi', 'Gohir.D13G150600' => 'ghi', 'Gorai.001G057300' => 'gra', 'Gorai.002G069900' => 'gra', 'Gorai.002G200000' => 'gra', 'Gorai.003G067600' => 'gra', 'Gorai.005G074800' => 'gra', 'Gorai.006G087300' => 'gra', 'Gorai.008G037500' => 'gra', 'Gorai.008G181400' => 'gra', 'Gorai.009G169400' => 'gra', 'Gorai.009G387900' => 'gra', 'Gorai.010G013300' => 'gra', 'Gorai.010G153800' => 'gra', 'Gorai.010G255800' => 'gra', 'Gorai.011G043700' => 'gra', 'Gorai.011G198900' => 'gra', 'Gorai.013G168400' => 'gra', 'GSVIVG01005212001' => 'vvi', 'GSVIVG01006163001' => 'vvi', 'GSVIVG01009625001' => 'vvi', 'GSVIVG01014338001' => 'vvi', 'GSVIVG01020005001' => 'vvi', 'GSVIVG01021450001' => 'vvi', 'GSVIVG01023975001' => 'vvi', 'GSVIVG01034490001' => 'vvi', 'HanXRQChr04g0112071' => 'han', 'HanXRQChr05g0131151' => 'han', 'HanXRQChr09g0262371' => 'han', 'HanXRQChr09g0268401' => 'han', 'HanXRQChr10g0279241' => 'han', 'HanXRQChr10g0297961' => 'han', 'HanXRQChr11g0326231' => 'han', 'HanXRQChr11g0328471' => 'han', 'HanXRQChr16g0507941' => 'han', 'HanXRQChr17g0560211' => 'han', 'Haze_02108' => 'cav', 'Haze_02428' => 'cav', 'Haze_05593' => 'cav', 'Haze_06448' => 'cav', 'Haze_09427' => 'cav', 'Haze_12022' => 'cav', 'Haze_17612' => 'cav', 'Haze_17928' => 'cav', 'Hma1.2p1_0032F.1_g019250' => 'hma', 'Hma1.2p1_0163F.1_g072690' => 'hma', 'Hma1.2p1_0265F.1_g106710' => 'hma', 'Hma1.2p1_0286F.1_g113970' => 'hma', 'Hma1.2p1_0363F.1_g136640' => 'hma', 'Hma1.2p1_0584F.1_g183470' => 'hma', 'Hma1.2p1_0885F.1_g232570' => 'hma', 'HPP92_006022' => 'vpl', 'HPP92_007320' => 'vpl', 'HPP92_011521' => 'vpl', 'HPP92_019387' => 'vpl', 'HPP92_024038' => 'vpl', 'Hund05891' => 'sun', 'Hund06450' => 'sun', 'Hund12053' => 'sun', 'Hund16800' => 'sun', 'Hund21222' => 'sun', 'Hund22896' => 'sun', 'Hund23746' => 'sun', 'Hund27083' => 'sun', 'Lalb_Chr02g0141831' => 'lal', 'Lalb_Chr02g0141841' => 'lal', 'Lalb_Chr05g0220411' => 'lal', 'Lalb_Chr06g0162081' => 'lal', 'Lalb_Chr09g0327651' => 'lal', 'Lalb_Chr13g0295051' => 'lal', 'Lalb_Chr15g0086801' => 'lal', 'Lalb_Chr16g0383781' => 'lal', 'Lalb_Chr16g0383791' => 'lal', 'Lalb_Chr18g0055441' => 'lal', 'Lalb_Chr18g0059611' => 'lal', 'Lalb_Chr20g0109661' => 'lal', 'Lalb_Chr20g0109831' => 'lal', 'Lalb_Chr20g0121871' => 'lal', 'Lalb_Chr22g0355361' => 'lal', 'Lalb_Chr25g0286371' => 'lal', 'Lj1A1187G43' => 'lonja', 'Lj1A1205T50' => 'lonja', 'Lj1A800G33' => 'lonja', 'Lj1C1187T7' => 'lonja', 'Lj1C843T11' => 'lonja', 'Lj1g0010940' => 'lja', 'Lj2A288T69' => 'lonja', 'Lj3g0024276' => 'lja', 'Lj4A47T76' => 'lonja', 'Lj4g0005805' => 'lja', 'Lj4g0006097' => 'lja', 'Lj4g0008528' => 'lja', 'Lj4g0024907' => 'lja', 'Lj5g0012472' => 'lja', 'Lj5g0018648' => 'lja', 'Lj6C789G1' => 'lonja', 'Lj6g0004000' => 'lja', 'Lj7A292G67' => 'lonja', 'Lj7A292T64' => 'lonja', 'Lj9A400T58' => 'lonja', 'Lsat_1_v5_gn_1_126181' => 'lsa', 'Lsat_1_v5_gn_4_123041' => 'lsa', 'Lsat_1_v5_gn_4_133620' => 'lsa', 'Lsat_1_v5_gn_4_53221' => 'lsa', 'Lsat_1_v5_gn_4_71961' => 'lsa', 'Lsat_1_v5_gn_7_105241' => 'lsa', 'Lsat_1_v5_gn_7_21361' => 'lsa', 'Lsat_1_v5_gn_7_28860' => 'lsa', 'Lsat_1_v5_gn_7_31260' => 'lsa', 'Lsat_1_v5_gn_8_52801' => 'lsa', 'Manes.02G191400' => 'mes', 'Manes.03G110100' => 'mes', 'Manes.04G071100' => 'mes', 'Manes.05G100500' => 'mes', 'Manes.05G164700' => 'mes', 'Manes.15G087000' => 'mes', 'Manes.15G121500' => 'mes', 'Manes.16G028300' => 'mes', 'Manes.17G046100' => 'mes', 'Manes.17G069800' => 'mes', 'Manes.18G100500' => 'mes', 'Mapoly0002s0109' => 'mpo', 'Mapoly0024s0007' => 'mpo', 'Mapoly0089s0032' => 'mpo', 'MBI04_g42241_MAGBIO' => 'mbi', 'MBI05_g11988_MAGBIO' => 'mbi', 'MBI05_g35452_MAGBIO' => 'mbi', 'MBI07_g30179_MAGBIO' => 'mbi', 'MBI07_g35859_MAGBIO' => 'mbi', 'MBI07_g35860_MAGBIO' => 'mbi', 'MBI07_g37166_MAGBIO' => 'mbi', 'MBI08_g18172_MAGBIO' => 'mbi', 'MBI09_g08441_MAGBIO' => 'mbi', 'MBI13_g01676_MAGBIO' => 'mbi', 'MBI14_g42955_MAGBIO' => 'mbi', 'MBI16_g13161_MAGBIO' => 'mbi', 'MBI17_g27204_MAGBIO' => 'mbi', 'MBI19_g21595_MAGBIO' => 'mbi', 'MD00G1148400' => 'mdo', 'MD02G1301200' => 'mdo', 'MD03G1227800' => 'mdo', 'MD05G1041100' => 'mdo', 'MD05G1124800' => 'mdo', 'MD05G1284000' => 'mdo', 'MD05G1338800' => 'mdo', 'MD05G1338900' => 'mdo', 'MD07G1022800' => 'mdo', 'MD10G1047500' => 'mdo', 'MD10G1127500' => 'mdo', 'MD10G1262300' => 'mdo', 'MD10G1293800' => 'mdo', 'MD16G1074300' => 'mdo', 'Medtr1g021670' => 'mtr', 'Medtr1g096320' => 'mtr', 'Medtr2g013690' => 'mtr', 'Medtr2g019450' => 'mtr', 'Medtr2g085170' => 'mtr', 'Medtr4g088785' => 'mtr', 'Medtr8g055930' => 'mtr', 'Medtr8g085850' => 'mtr', 'MELO3C002605.2' => 'cme', 'MELO3C003891.2' => 'cme', 'MELO3C004012.2' => 'cme', 'MELO3C007134.2' => 'cme', 'MELO3C008118.2' => 'cme', 'MELO3C016700.2' => 'cme', 'MELO3C024127.2' => 'cme', 'MELO3C033361.2' => 'cme', 'MELO3C033362.2' => 'cme', 'Migut.C00430' => 'egut', 'Migut.C01246' => 'egut', 'Migut.E00101' => 'egut', 'Migut.H01486' => 'egut', 'Migut.H01939' => 'egut', 'Migut.K00360' => 'egut', 'Migut.M00910' => 'egut', 'Migut.M01139' => 'egut', 'Migut.N02677' => 'egut', 'MSTRG.13252' => 'ama', 'MSTRG.14701' => 'ama', 'MSTRG.1521' => 'ama', 'MSTRG.15884' => 'ama', 'MSTRG.16242' => 'ama', 'MSTRG.22285' => 'ama', 'MSTRG.22444' => 'ama', 'MSTRG.2349' => 'ama', 'MSTRG.26308' => 'ama', 'MSTRG.28296' => 'ama', 'MSTRG.9895' => 'ama', 'Nitab4.5_0000110g0060' => 'nta', 'Nitab4.5_0000420g0130' => 'nta', 'Nitab4.5_0000422g0030' => 'nta', 'Nitab4.5_0000560g0180' => 'nta', 'Nitab4.5_0000703g0100' => 'nta', 'Nitab4.5_0000786g0200' => 'nta', 'Nitab4.5_0001336g0020' => 'nta', 'Nitab4.5_0001796g0030' => 'nta', 'Nitab4.5_0003348g0060' => 'nta', 'Nitab4.5_0003698g0040' => 'nta', 'Nitab4.5_0003942g0090' => 'nta', 'Nitab4.5_0004775g0070' => 'nta', 'Nitab4.5_0004864g0030' => 'nta', 'Nitab4.5_0005615g0020' => 'nta', 'Nitab4.5_0009288g0030' => 'nta', 'Nitab4.5_0009341g0010' => 'nta', 'Nitab4.5_0009535g0010' => 'nta', 'Nn1g03995' => 'nnu', 'Nn1g04100' => 'nnu', 'Nn1g06530' => 'nnu', 'Nn3g16404' => 'nnu', 'Nn3g17212' => 'nnu', 'Nn3g20776' => 'nnu', 'Nn3g21923' => 'nnu', 'Nn5g27737' => 'nnu', 'Nn5g29461' => 'nnu', 'Nn7g38355' => 'nnu', 'Nn8g39873' => 'nnu', 'Oeu000548.2' => 'oeu', 'Oeu004672.1' => 'oeu', 'Oeu015605.2' => 'oeu', 'Oeu016092.1' => 'oeu', 'Oeu017879.3' => 'oeu', 'Oeu024910.1' => 'oeu', 'Oeu028965.1' => 'oeu', 'Oeu031269.1' => 'oeu', 'Oeu031270.1' => 'oeu', 'Oeu032535.1' => 'oeu', 'Oeu034151.1' => 'oeu', 'Oeu034152.1' => 'oeu', 'Oeu034588.2' => 'oeu', 'Oeu050846.1' => 'oeu', 'Oeu050849.2' => 'oeu', 'Oeu051063.2' => 'oeu', 'Oeu052368.1' => 'oeu', 'Oeu052370.1' => 'oeu', 'Os01g0210400' => 'osa', 'Os01g0304300' => 'osa', 'Os01g0749100' => 'osa', 'Os02g0745800' => 'osa', 'Os03g0769050' => 'osa', 'Os05g0531500' => 'osa', 'Os06g0724300' => 'osa', 'Os11g0198100' => 'osa', 'Peaxi162Scf00069g01425' => 'pax', 'Peaxi162Scf00280g00811' => 'pax', 'Peaxi162Scf00310g00615' => 'pax', 'Peaxi162Scf00362g00542' => 'pax', 'Peaxi162Scf00461g00310' => 'pax', 'Peaxi162Scf00530g00118' => 'pax', 'Peaxi162Scf00541g00057' => 'pax', 'Peaxi162Scf00661g00017' => 'pax', 'Peaxi162Scf00926g00027' => 'pax', 'Peaxi162Scf01064g00263' => 'pax', 'Peaxi162Scf01211g00135' => 'pax', 'PGR004G2336' => 'pgr', 'PGR042G0327' => 'pgr', 'PGR042G1957' => 'pgr', 'PGR042G2003' => 'pgr', 'PGR042G3929' => 'pgr', 'PGR083G1137' => 'pgr', 'PGR083G1364' => 'pgr', 'PGSC0003DMG400003381' => 'stu', 'PGSC0003DMG400003417' => 'stu', 'PGSC0003DMG400008981' => 'stu', 'PGSC0003DMG400012417' => 'stu', 'PGSC0003DMG400012823' => 'stu', 'PGSC0003DMG400016885' => 'stu', 'PGSC0003DMG400022812' => 'stu', 'PGSC0003DMG400029726' => 'stu', 'PGSC0003DMG401009243' => 'stu', 'PGSC0003DMG401031505' => 'stu', 'PGSC0003DMG402031505' => 'stu', 'Phvul.001G017600' => 'pvu', 'Phvul.002G193500' => 'pvu', 'Phvul.002G228900' => 'pvu', 'Phvul.002G236800' => 'pvu', 'Phvul.003G049500' => 'pvu', 'Phvul.005G072000' => 'pvu', 'Phvul.006G164800' => 'pvu', 'Phvul.006G185100' => 'pvu', 'Phvul.007G090000' => 'pvu', 'Potri.001G399800' => 'ptr', 'Potri.002G149900' => 'ptr', 'Potri.004G044100' => 'ptr', 'Potri.004G177600' => 'ptr', 'Potri.009G138000' => 'ptr', 'Potri.010G094000' => 'ptr', 'Potri.011G053000' => 'ptr', 'Potri.011G119300' => 'ptr', 'Potri.013G113700' => 'ptr', 'Potri.018G107800' => 'ptr', 'Potri.019G084100' => 'ptr', 'Pp3c14_23720' => 'ppa', 'Pp3c16_6340' => 'ppa', 'Pp3c23_13420' => 'ppa', 'Pp3c24_2740' => 'ppa', 'Pp3c25_860' => 'ppa', 'Pp3c8_21750' => 'ppa', 'Prupe.1G273000' => 'ppe', 'Prupe.1G273700' => 'ppe', 'Prupe.1G274100' => 'ppe', 'Prupe.2G023300' => 'ppe', 'Prupe.4G048000' => 'ppe', 'Prupe.4G080400' => 'ppe', 'Prupe.4G181200' => 'ppe', 'Prupe.8G056900' => 'ppe', 'Prupe.8G168700' => 'ppe', 'Psat1g189080' => 'psa', 'Psat1g204760' => 'psa', 'Psat4g175560' => 'psa', 'Psat4g177720' => 'psa', 'Psat5g244240' => 'psa', 'Psat6g010720' => 'psa', 'Psat6g187200' => 'psa', 'Psat7g072040' => 'psa', 'PSO017G3501' => 'pso', 'PSO063G2148' => 'pso', 'PSO063G5608' => 'pso', 'PSO210G6392' => 'pso', 'PSO541G2319' => 'pso', 'PSO541G2836' => 'pso', 'PSO541G4012' => 'pso', 'PSO541G6253' => 'pso', 'PSO675G0580' => 'pso', 'PSO675G0856' => 'pso', 'PSO675G5635' => 'pso', 'PSO675G9157' => 'pso', 'PSO832G1660' => 'pso', 'PSO832G1969' => 'pso', 'QL02p007186' => 'qlo', 'QL02p033904' => 'qlo', 'QL03p064391' => 'qlo', 'QL05p040593' => 'qlo', 'QL05p058242' => 'qlo', 'QL08p021825' => 'qlo', 'QL11p004981' => 'qlo', 'RcHm_v2.0_Chr1g0318301' => 'rch', 'RcHm_v2.0_Chr4g0418501' => 'rch', 'RcHm_v2.0_Chr4g0439971' => 'rch', 'RcHm_v2.0_Chr5g0008541' => 'rch', 'RcHm_v2.0_Chr5g0014101' => 'rch', 'RcHm_v2.0_Chr5g0014131' => 'rch', 'RcHm_v2.0_Chr5g0033621' => 'rch', 'RcHm_v2.0_Chr6g0272041' => 'rch', 'RcHm_v2.0_Chr6g0278831' => 'rch', 'Rhsim02G0130400' => 'rsi', 'Rhsim02G0171100' => 'rsi', 'Rhsim05G0053000' => 'rsi', 'Rhsim05G0053100' => 'rsi', 'Rhsim06G0096500' => 'rsi', 'Rhsim06G0096600' => 'rsi', 'Rhsim06G0199100' => 'rsi', 'Rhsim12G0062300' => 'rsi', 'Rhsim12G0062800' => 'rsi', 'Sabra02G0118600' => 'sbr', 'Sabra04G0027300' => 'sbr', 'Sabra04G0119500' => 'sbr', 'Sabra08G0112500' => 'sbr', 'Sabra11G0036800' => 'sbr', 'Sabra11G0103800' => 'sbr', 'Sabra13G0096300' => 'sbr', 'Sabra16G0262300' => 'sbr', 'Sabra18G0091700' => 'sbr', 'Sabra19G0095400' => 'sbr', 'SalBow6G3080' => 'sbo', 'SalBow7G1157' => 'sbo', 'SalBow7G2123' => 'sbo', 'SalBow7G2285' => 'sbo', 'SalBow7G3537' => 'sbo', 'SalBow8G2947' => 'sbo', 'SalBow8G4463' => 'sbo', 'SalBow8G5466' => 'sbo', 'Sc01g0001750' => 'sci', 'Sc02g0006640' => 'sci', 'Sc02g0006670' => 'sci', 'Sc04g0008220' => 'sci', 'Sc05g0006190' => 'sci', 'Sc08g0002760' => 'sci', 'Sc17g0006170' => 'sci', 'Sc22g0002050' => 'sci', 'Sc23g0001190' => 'sci', 'Sc24g0000980' => 'sci', 'Sed0006245' => 'sed', 'Sed0007543' => 'sed', 'Sed0009411' => 'sed', 'Sed0010765' => 'sed', 'Sed0012944' => 'sed', 'Sed0014682' => 'sed', 'Sed0016174' => 'sed', 'Sed0016796' => 'sed', 'Sed0020317' => 'sed', 'Sed0021467' => 'sed', 'SEGI_01316' => 'sgi', 'SEGI_03374' => 'sgi', 'SEGI_16265' => 'sgi', 'SEGI_18569' => 'sgi', 'SEGI_20351' => 'sgi', 'SEGI_26395' => 'sgi', 'SEGI_29469' => 'sgi', 'SEGI_34771' => 'sgi', 'SEGI_36769' => 'sgi', 'SEGI_37139' => 'sgi', 'SGA_v2.0_scaffold100G29687' => 'sas', 'SGA_v2.0_scaffold118G32472' => 'sas', 'SGA_v2.0_scaffold14G07051' => 'sas', 'SGA_v2.0_scaffold183G39845' => 'sas', 'SGA_v2.0_scaffold1G00174' => 'sas', 'SGA_v2.0_scaffold22G09714' => 'sas', 'SGA_v2.0_scaffold333G48992' => 'sas', 'SGA_v2.0_scaffold46G17491' => 'sas', 'SGA_v2.0_scaffold49G18294' => 'sas', 'SGA_v2.0_scaffold63G21658' => 'sas', 'SHI01741' => 'shi', 'SHI05771' => 'shi', 'SHI18077' => 'shi', 'SHI20525' => 'shi', 'SHI20527' => 'shi', 'SHI20528' => 'shi', 'SMO172G0185' => 'smo', 'SMO198G0020' => 'smo', 'SMO351G0006' => 'smo', 'SMO356G0118' => 'smo', 'SMO358G0296' => 'smo', 'SMO367G0079' => 'smo', 'SMO367G1277' => 'smo', 'Solyc01g014220.3' => 'sly', 'Solyc01g111770.2' => 'sly', 'Solyc02g078180.3' => 'sly', 'Solyc03g006430.3' => 'sly', 'Solyc03g006456.1' => 'sly', 'Solyc03g079860.2' => 'sly', 'Solyc04g079770.3' => 'sly', 'Solyc05g007430.4' => 'sly', 'Solyc07g063150.3' => 'sly', 'Solyc08g016620.3' => 'sly', 'Solyc09g057590.3' => 'sly', 'Solyc09g057600.1' => 'sly', 'Solyc10g009050.3' => 'sly', 'Solyc11g017420.2' => 'sly', 'Sopen01g053810' => 'spe', 'Sopen02g023040' => 'spe', 'Sopen03g002440' => 'spe', 'Sopen04g033350' => 'spe', 'Sopen05g003310' => 'spe', 'Sopen07g004050' => 'spe', 'Sopen07g031340' => 'spe', 'Sopen08g006990' => 'spe', 'Sopen10g004830' => 'spe', 'Sopen11g009370' => 'spe', 'Sp1g24450' => 'spa', 'Sp1g29670' => 'spa', 'Sp1g39600' => 'spa', 'Sp2g11080' => 'spa', 'Sp2g13970' => 'spa', 'Sp4g16130' => 'spa', 'Sp6g13080' => 'spa', 'Sp7g37270' => 'spa', 'TAR371G0065' => 'tar', 'TAR376G0340' => 'tar', 'TAR376G0435' => 'tar', 'TAR381G0002' => 'tar', 'TAR381G1236' => 'tar', 'TAR624G0055' => 'tar', 'TAR624G0324' => 'tar', 'TAR624G0696' => 'tar', 'TAR624G0906' => 'tar', 'TAR625G0107' => 'tar', 'TAR626G0015' => 'tar', 'TAR626G1356' => 'tar', 'TAR627G0888' => 'tar', 'TAR628G0399' => 'tar', 'TAR628G1327' => 'tar', 'TAR629G2831' => 'tar', 'TAR629G2874' => 'tar', 'TAR633G1432' => 'tar', 'TAR633G2771' => 'tar', 'THA.LOC104803394' => 'tha', 'THA.LOC104805153' => 'tha', 'THA.LOC104806784' => 'tha', 'THA.LOC104810473' => 'tha', 'THA.LOC104813100' => 'tha', 'THA.LOC104814215' => 'tha', 'THA.LOC104815554' => 'tha', 'THA.LOC104820544' => 'tha', 'THA.LOC104824754' => 'tha', 'THA.LOC104827717' => 'tha', 'Thecc.02G031400' => 'tca', 'Thecc.02G055900' => 'tca', 'Thecc.02G350800' => 'tca', 'Thecc.06G150900' => 'tca', 'Thecc.06G186600' => 'tca', 'Thecc.07G089600' => 'tca', 'Thecc.08G020400' => 'tca', 'Thecc.08G182100' => 'tca', 'Thhalv10000873m.g' => 'esa', 'Thhalv10004185m.g' => 'esa', 'Thhalv10006981m.g' => 'esa', 'Thhalv10007204m.g' => 'esa', 'Thhalv10011374m.g' => 'esa', 'Thhalv10013482m.g' => 'esa', 'Thhalv10017801m.g' => 'esa', 'Thhalv10024983m.g' => 'esa', 'TPR.G12072' => 'tpr', 'TPR.G15769' => 'tpr', 'TPR.G16504' => 'tpr', 'TPR.G16506' => 'tpr', 'TPR.G24345' => 'tpr', 'TPR.G26666' => 'tpr', 'TPR.G27320' => 'tpr', 'TPR.G31819' => 'tpr', 'TPR.G38879' => 'tpr', 'TPR.G39015' => 'tpr', 'TPR.G8819' => 'tpr', 'TWI09G0924' => 'twi', 'TWI12G0811' => 'twi', 'TWI12G1294' => 'twi', 'TWI31G0150' => 'twi', 'TWI36G1262' => 'twi', 'TWI38G1287' => 'twi', 'TWI38G1633' => 'twi', 'TWI38G1982' => 'twi', 'TWI39G0116' => 'twi', 'TWI60G1011' => 'twi', 'TWI63G0171' => 'twi', 'TWI73G0839' => 'twi', 'TWI79G1511' => 'twi', 'unitig_0.g915' => 'ugi', 'unitig_0.g916' => 'ugi', 'unitig_21.g20219' => 'ugi', 'unitig_21.g20416' => 'ugi', 'unitig_578.g16132' => 'ugi', 'unitig_578.g16718' => 'ugi', 'unitig_62.g23481' => 'ugi', 'unitig_744.g24535' => 'ugi', 'unitig_749.g13525' => 'ugi', 'vmacro01248' => 'vma', 'vmacro02290' => 'vma', 'vmacro10946' => 'vma', 'vmacro11865' => 'vma', 'vmacro12493' => 'vma', 'vmacro17322' => 'vma', 'vmacro21599' => 'vma', 'vmacro23041' => 'vma', 'VMungo0251G0004' => 'vmu', 'VMungo0251G2639' => 'vmu', 'VMungo0251G2967' => 'vmu', 'VMungo0540G0864' => 'vmu', 'VMungo0540G1569' => 'vmu', 'VMungo0647G0317' => 'vmu', 'VMungo0720G1373' => 'vmu', 'VMungo0720G1508' => 'vmu', 'VMungo1080G0485' => 'vmu', 'VMungo1215G3177' => 'vmu', 'Zm00001eb112600' => 'zma', 'Zm00001eb120220' => 'zma', 'Zm00001eb153240' => 'zma', 'Zm00001eb168880' => 'zma', 'Zm00001eb213920' => 'zma', 'Zm00001eb228280' => 'zma', 'Zm00001eb254580' => 'zma', 'Zm00001eb272180' => 'zma', 'Zm00001eb293190' => 'zma', 'Zm00001eb322930' => 'zma', 'Zm00001eb353360' => 'zma', 'Zm00001eb353390' => 'zma', 'Zm00001eb353430' => 'zma', 'Zm00001eb353440' => 'zma', 'Zm00001eb353780' => 'zma' ) $gf_id = 'HOM05D000499' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000499' ) $data_identifier = 'HOM05D000499' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 29, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 12, 'amhyb' => (int) 8, 'aly' => (int) 12, 'aox' => (int) 9, 'arhy' => (int) 26, 'ath' => (int) 8, 'atr' => (int) 7, 'acertr' => (int) 10, 'cqu' => (int) 15, 'bca' => (int) 29, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 11, 'cansat' => (int) 8, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 9, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 8, 'cpa' => (int) 10, 'csa' => (int) 7, 'camsi' => (int) 20, 'dca' => (int) 8, 'din' => (int) 12, 'dzi' => (int) 14, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 6, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 38, 'gra' => (int) 16, 'vvi' => (int) 8, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 5, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 11, 'lja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 11, 'mpo' => (int) 3, 'mbi' => (int) 14, 'mdo' => (int) 14, 'mtr' => (int) 8, 'cme' => (int) 9, 'egut' => (int) 9, 'ama' => (int) 11, 'nta' => (int) 17, 'nnu' => (int) 11, 'oeu' => (int) 18, 'osa' => (int) 8, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 6, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 9, 'rsi' => (int) 9, 'sbr' => (int) 10, 'sbo' => (int) 8, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 10, 'sas' => (int) 10, 'shi' => (int) 6, 'smo' => (int) 7, 'sly' => (int) 14, 'spe' => (int) 10, 'spa' => (int) 8, 'tar' => (int) 19, 'tha' => (int) 10, 'tca' => (int) 8, 'esa' => (int) 8, 'tpr' => (int) 11, 'twi' => (int) 13, 'ugi' => (int) 9, 'vma' => (int) 8, 'vmu' => (int) 10, 'zma' => (int) 15 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb353780' $species_info = array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ) $local_species = 'mdo' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000499', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1066', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p29780' => 'bna', 'A02p33180' => 'bna', 'A03p16470' => 'bna', 'A03p66010' => 'bna', 'A04p25970' => 'bna', 'A06p01270' => 'bna', 'A06p46080' => 'bna', 'A07p11400' => 'bna', 'A08p01840' => 'bna', 'A08p08230' => 'bna', 'A08p25740' => 'bna', 'A09p32070' => 'bna', 'A09p37830' => 'bna', 'A09p42840' => 'bna', 'A09p42850' => 'bna', 'Aa31LG10G2060' => 'aar', 'Aa31LG2G7410' => 'aar', 'Aa31LG6G10200' => 'aar', 'Aa31LG6G16680' => 'aar', 'Aa31LG6G8470' => 'aar', 'Aa31LG9G12730' => 'aar', 'Aa31LG9G13680' => 'aar', 'Aa31LG9G14920' => 'aar', 'Aa31LG9G6650' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4977' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5467' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3254' => 'aag', 'Actinidia02578' => 'ach', 'Actinidia07693' => 'ach', 'Actinidia08413' => 'ach', 'Actinidia08414' => 'ach', 'Actinidia15289' => 'ach', 'Actinidia19871' => 'ach', 'Actinidia21475' => 'ach', 'Actinidia22576' => 'ach', 'Actinidia28327' => 'ach', 'Actinidia32491' => 'ach', 'Actinidia39463' => 'ach', 'Actinidia39571' => 'ach', 'Ah.01g013750' => 'amhyb', 'Ah.01g023210' => 'amhyb', 'Ah.04g164850' => 'amhyb', 'Ah.05g178060' => 'amhyb', 'Ah.07g204270' => 'amhyb', 'Ah.07g208480' => 'amhyb', 'Ah.09g237410' => 'amhyb', 'Ah.14g089460' => 'amhyb', 'AL1G41790' => 'aly', 'AL1G49050' => 'aly', 'AL1G53810' => 'aly', 'AL1G61400' => 'aly', 'AL4G18580' => 'aly', 'AL5G12510' => 'aly', 'AL5G12540' => 'aly', 'AL6G43230' => 'aly', 'AL7G10370' => 'aly', 'AL7G19250' => 'aly', 'AL8G12240' => 'aly', 'AL8G18540' => 'aly', 'Aqoxy1G02409' => 'aox', 'Aqoxy2G03993' => 'aox', 'Aqoxy3G03357' => 'aox', 'Aqoxy4G00785' => 'aox', 'Aqoxy5G02598' => 'aox', 'Aqoxy6G00132' => 'aox', 'Aqoxy7G01776' => 'aox', 'Aqoxy7G02316' => 'aox', 'Aqoxy7G03973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.12AFKW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B8730' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27IQR1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3F75VG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3RE0GA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41TCQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.527VTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FIR39' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5W8UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DA38EV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ63HS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H1I32C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HC27T5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4M8AP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7N3CZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9UVDZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LS1NQA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT1D4B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SKC4TM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCFV76' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF9Q1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQWD9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1ZM88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WE07RT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YCK7VH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJE6Q6' => 'arhy', 'AT1G28240' => 'ath', 'AT1G34550' => 'ath', 'AT1G53040' => 'ath', 'AT2G02910' => 'ath', 'AT4G09630' => 'ath', 'AT4G38500' => 'ath', 'AT5G42660' => 'ath', 'AT5G46220' => 'ath', 'ATR0152G026' => 'atr', 'ATR0564G343' => 'atr', 'ATR0706G151' => 'atr', 'ATR0733G207' => 'atr', 'ATR0751G234' => 'atr', 'ATR0807G048' => 'atr', 'ATR1091G084' => 'atr', 'Atru.chr10.1229' => 'acertr', 'Atru.chr10.1230' => 'acertr', 'Atru.chr10.1874' => 'acertr', 'Atru.chr11.1808' => 'acertr', 'Atru.chr13.1795' => 'acertr', 'Atru.chr13.570' => 'acertr', 'Atru.chr2.2608' => 'acertr', 'Atru.chr2.2609' => 'acertr', 'Atru.chr5.3428' => 'acertr', 'Atru.chr8.1171' => 'acertr', 'AUR62004651' => 'cqu', 'AUR62008675' => 'cqu', 'AUR62010014' => 'cqu', 'AUR62013004' => 'cqu', 'AUR62014825' => 'cqu', 'AUR62015015' => 'cqu', 'AUR62015151' => 'cqu', 'AUR62017020' => 'cqu', 'AUR62019422' => 'cqu', 'AUR62023570' => 'cqu', 'AUR62025571' => 'cqu', 'AUR62029098' => 'cqu', 'AUR62033863' => 'cqu', 'AUR62034296' => 'cqu', 'AUR62040075' => 'cqu', 'BcaB02g07334' => 'bca', 'BcaB02g10575' => 'bca', 'BcaB03g12119' => 'bca', 'BcaB03g12120' => 'bca', 'BcaB03g13945' => 'bca', 'BcaB04g17123' => 'bca', 'BcaB04g17867' => 'bca', 'BcaB04g19839' => 'bca', 'BcaB07g30317' => 'bca', 'BcaB07g32432' => 'bca', 'BcaB07g33362' => 'bca', 'BcaB08g36611' => 'bca', 'BcaC01g00028' => 'bca', 'BcaC01g01356' => 'bca', 'BcaC01g02034' => 'bca', 'BcaC01g06051' => 'bca', 'BcaC03g16839' => 'bca', 'BcaC03g17176' => 'bca', 'BcaC05g26829' => 'bca', 'BcaC06g31490' => 'bca', 'BcaC06g35344' => 'bca', 'BcaC06g36570' => 'bca', 'BcaC07g37537' => 'bca', 'BcaC08g43491' => 'bca', 'BcaC08g43773' => 'bca', 'BcaNung00234' => 'bca', 'BcaNung01982' => 'bca', 'BcaNung03707' => 'bca', 'BcaNung06454' => 'bca', 'BolC2t10762H' => 'bol', 'BolC2t11191H' => 'bol', 'BolC3t14322H' => 'bol', 'BolC3t19747H' => 'bol', 'BolC3t21425H' => 'bol', 'BolC4t27800H' => 'bol', 'BolC5t31423H' => 'bol', 'BolC6t35951H' => 'bol', 'BolC6t36282H' => 'bol', 'BolC7t40678H' => 'bol', 'BolC7t40679H' => 'bol', 'BolC7t42222H' => 'bol', 'BolC7t43492H' => 'bol', 'BolC7t46785H' => 'bol', 'BolC8t47853H' => 'bol', 'BolC9t56805H' => 'bol', 'BraA02t08000Z' => 'bra', 'BraA02t08341Z' => 'bra', 'BraA03t10936Z' => 'bra', 'BraA03t15657Z' => 'bra', 'BraA04t18100Z' => 'bra', 'BraA05t20523Z' => 'bra', 'BraA06t23353Z' => 'bra', 'BraA06t27473Z' => 'bra', 'BraA06t27769Z' => 'bra', 'BraA07t28928Z' => 'bra', 'BraA08t32236Z' => 'bra', 'BraA08t32841Z' => 'bra', 'BraA08t34524Z' => 'bra', 'BraA09t38742Z' => 'bra', 'BraA09t39295Z' => 'bra', 'C02p47180' => 'bna', 'C02p50990' => 'bna', 'C03p19360' => 'bna', 'C03p74950' => 'bna', 'C03p91000' => 'bna', 'C04p63260' => 'bna', 'C05p27050' => 'bna', 'C06p08750' => 'bna', 'C06p11490' => 'bna', 'C07p02820' => 'bna', 'C07p17180' => 'bna', 'C07p29440' => 'bna', 'C07p63730' => 'bna', 'C09p39260' => 'bna', 'CAN.G1164.34' => 'can', 'CAN.G1164.39' => 'can', 'CAN.G1530.3' => 'can', 'CAN.G162.61' => 'can', 'CAN.G176.6' => 'can', 'CAN.G289.49' => 'can', 'CAN.G370.21' => 'can', 'CAN.G370.22' => 'can', 'CAN.G371.117' => 'can', 'CAN.G58.37' => 'can', 'CAN.G588.98' => 'can', 'CANSAT21G2266' => 'cansat', 'CANSAT25G2799' => 'cansat', 'CANSAT35G0862' => 'cansat', 'CANSAT35G1704' => 'cansat', 'CANSAT35G1760' => 'cansat', 'CANSAT56G3971' => 'cansat', 'CANSAT56G4116' => 'cansat', 'CANSAT80G1259' => 'cansat', 'CARHR027730' => 'chi', 'CARHR033880' => 'chi', 'CARHR043270' => 'chi', 'CARHR145330' => 'chi', 'CARHR145340' => 'chi', 'CARHR175570' => 'chi', 'CARHR181570' => 'chi', 'CARHR258470' => 'chi', 'CARHR260490' => 'chi', 'CARHR294220' => 'chi', 'Carub.0001s2668' => 'cru', 'Carub.0001s3257' => 'cru', 'Carub.0001s4220' => 'cru', 'Carub.0005s0179' => 'cru', 'Carub.0006s2807' => 'cru', 'Carub.0007s0039' => 'cru', 'Carub.0008s0169' => 'cru', 'Carub.0008s0636' => 'cru', 'Ca_00338_v3' => 'car', 'Ca_00542_v3' => 'car', 'Ca_01844_v3' => 'car', 'Ca_10611_v3' => 'car', 'Ca_13326_v3' => 'car', 'Ca_17944_v3' => 'car', 'Ca_18546_v3' => 'car', 'Ca_24219_v3' => 'car', 'Ca_29972_v3' => 'car', 'CBR_g3681' => 'cbr', 'CBR_g40021' => 'cbr', 'Cc01_g08140' => 'ccan', 'Cc02_g13410' => 'ccan', 'Cc02_g37480' => 'ccan', 'Cc05_g12030' => 'ccan', 'Cc09_g03370' => 'ccan', 'Cc09_g10300' => 'ccan', 'Cc10_g03530' => 'ccan', 'Cc10_g11380' => 'ccan', 'CDE01G0176' => 'cde', 'CDE02G0675' => 'cde', 'CDE02G0942' => 'cde', 'CDE02G1153' => 'cde', 'CDE02G4177' => 'cde', 'CDE04G2117' => 'cde', 'CDE04G2736' => 'cde', 'CDE08G1161' => 'cde', 'CDE09G1238' => 'cde', 'Cfa000467' => 'cfa', 'Cfa000947' => 'cfa', 'Cfa004969' => 'cfa', 'Cfa005284' => 'cfa', 'Cfa008993' => 'cfa', 'Cfa018187' => 'cfa', 'Cfa018454' => 'cfa', 'Cfa020585' => 'cfa', 'Ciclev10000424m.g' => 'ccl', 'Ciclev10003605m.g' => 'ccl', 'Ciclev10007828m.g' => 'ccl', 'Ciclev10014620m.g' => 'ccl', 'Ciclev10015169m.g' => 'ccl', 'Ciclev10018291m.g' => 'ccl', 'Ciclev10028256m.g' => 'ccl', 'Ciclev10033822m.g' => 'ccl', 'CiPaw.05G060300' => 'cil', 'CiPaw.05G085000' => 'cil', 'CiPaw.06G083700' => 'cil', 'CiPaw.06G120300' => 'cil', 'CiPaw.09G060500' => 'cil', 'CiPaw.09G123800' => 'cil', 'CiPaw.11G169700' => 'cil', 'CiPaw.12G118300' => 'cil', 'CiPaw.15G071000' => 'cil', 'CiPaw.15G081900' => 'cil', 'ClCG01G024610' => 'cla', 'ClCG03G006070' => 'cla', 'ClCG05G019250' => 'cla', 'ClCG09G009500' => 'cla', 'ClCG11G008200' => 'cla', 'ClCG11G018080' => 'cla', 'COL.COLO4_17373' => 'col', 'COL.COLO4_22994' => 'col', 'COL.COLO4_26389' => 'col', 'COL.COLO4_27170' => 'col', 'COL.COLO4_31074' => 'col', 'COL.COLO4_31465' => 'col', 'COL.COLO4_36438' => 'col', 'COL.COLO4_36439' => 'col', 'Cpa.g.c38781' => 'cpa', 'Cpa.g.sc128.12' => 'cpa', 'Cpa.g.sc166.7' => 'cpa', 'Cpa.g.sc166.8' => 'cpa', 'Cpa.g.sc20.111' => 'cpa', 'Cpa.g.sc27.31' => 'cpa', 'Cpa.g.sc64.36' => 'cpa', 'Cpa.g.sc64.37' => 'cpa', 'Cpa.g.sc66.49' => 'cpa', 'Cpa.g.sc80.64' => 'cpa', 'CsaV3_1G012320' => 'csa', 'CsaV3_2G008480' => 'csa', 'CsaV3_2G033450' => 'csa', 'CsaV3_3G044830' => 'csa', 'CsaV3_4G033710' => 'csa', 'CsaV3_6G051730' => 'csa', 'CsaV3_7G025350' => 'csa', 'CSS0001067' => 'camsi', 'CSS0005996' => 'camsi', 'CSS0006590' => 'camsi', 'CSS0009673' => 'camsi', 'CSS0010201' => 'camsi', 'CSS0010549' => 'camsi', 'CSS0011364' => 'camsi', 'CSS0014473' => 'camsi', 'CSS0014961' => 'camsi', 'CSS0020191' => 'camsi', 'CSS0021165' => 'camsi', 'CSS0022306' => 'camsi', 'CSS0030591' => 'camsi', 'CSS0030696' => 'camsi', 'CSS0032653' => 'camsi', 'CSS0037487' => 'camsi', 'CSS0041102' => 'camsi', 'CSS0041261' => 'camsi', 'CSS0046246' => 'camsi', 'CSS0049256' => 'camsi', 'DCAR_004075' => 'dca', 'DCAR_011538' => 'dca', 'DCAR_019553' => 'dca', 'DCAR_020952' => 'dca', 'DCAR_021739' => 'dca', 'DCAR_027407' => 'dca', 'DCAR_027913' => 'dca', 'DCAR_028066' => 'dca', 'Dinv05899' => 'din', 'Dinv07563' => 'din', 'Dinv08010' => 'din', 'Dinv14125' => 'din', 'Dinv20172' => 'din', 'Dinv30743' => 'din', 'Dinv31229' => 'din', 'Dinv34162' => 'din', 'Dinv36028' => 'din', 'Dinv39368' => 'din', 'Dinv40565' => 'din', 'Dinv41706' => 'din', 'Duzib052G0089' => 'dzi', 'Duzib116G0641' => 'dzi', 'Duzib132G0069' => 'dzi', 'Duzib132G1219' => 'dzi', 'Duzib147G0278' => 'dzi', 'Duzib160G0480' => 'dzi', 'Duzib170G0661' => 'dzi', 'Duzib177G0591' => 'dzi', 'Duzib187G1353' => 'dzi', 'Duzib192G0858' => 'dzi', 'Duzib192G0883' => 'dzi', 'Duzib213G0506' => 'dzi', 'Duzib235G0289' => 'dzi', 'Duzib251G0422' => 'dzi', 'ECA232G3898' => 'eca', 'ECA233G5950' => 'eca', 'ECA234G1699' => 'eca', 'ECA234G2421' => 'eca', 'ECA236G0426' => 'eca', 'ECA236G4331' => 'eca', 'ECA248G2573' => 'eca', 'EL10Ac1g00077' => 'bvu', 'EL10Ac1g01746' => 'bvu', 'EL10Ac2g03464' => 'bvu', 'EL10Ac4g08176' => 'bvu', 'EL10Ac7g17521' => 'bvu', 'EL10Ac8g20386' => 'bvu', 'EL10Ac9g21343' => 'bvu', 'EL10Ac9g22688' => 'bvu', 'Eucgr.B03434' => 'egr', 'Eucgr.D00618' => 'egr', 'Eucgr.E02395' => 'egr', 'Eucgr.F01129' => 'egr', 'Eucgr.F02622' => 'egr', 'Eucgr.F04207' => 'egr', 'FAN01G0570' => 'fan', 'FAN03G3351' => 'fan', 'FAN06G3702' => 'fan', 'FAN07G2149' => 'fan', 'FAN10G3758' => 'fan', 'FAN11G1170' => 'fan', 'FAN11G2050' => 'fan', 'FAN11G2724' => 'fan', 'FAN12G1700' => 'fan', 'FAN12G2028' => 'fan', 'FAN15G1160' => 'fan', 'FAN15G3063' => 'fan', 'FAN16G2540' => 'fan', 'FAN16G3077' => 'fan', 'FAN16G3624' => 'fan', 'FAN17G0221' => 'fan', 'FAN20G2492' => 'fan', 'FAN20G2905' => 'fan', 'FAN21G0548' => 'fan', 'FAN21G1300' => 'fan', 'FAN22G0077' => 'fan', 'FAN22G1315' => 'fan', 'FAN24G1280' => 'fan', 'FAN24G1445' => 'fan', 'FAN24G3527' => 'fan', 'FAN25G0464' => 'fan', 'FAN25G2885' => 'fan', 'FAN25G3270' => 'fan', 'FAN27G1101' => 'fan', 'FAN27G2846' => 'fan', 'FAN27G3524' => 'fan', 'FvH4_2g11770' => 'fve', 'FvH4_2g15630' => 'fve', 'FvH4_3g05570' => 'fve', 'FvH4_3g09110' => 'fve', 'FvH4_3g19940' => 'fve', 'FvH4_4g04821' => 'fve', 'FvH4_4g31480' => 'fve', 'FvH4_7g01740' => 'fve', 'Glyma.05G130400' => 'gma', 'Glyma.05G156400' => 'gma', 'Glyma.07G197000' => 'gma', 'Glyma.08G085151' => 'gma', 'Glyma.08G114500' => 'gma', 'Glyma.08G300400' => 'gma', 'Glyma.10G215800' => 'gma', 'Glyma.12G224400' => 'gma', 'Glyma.13G179300' => 'gma', 'Glyma.13G218151' => 'gma', 'Glyma.13G238800' => 'gma', 'Glyma.13G276900' => 'gma', 'Glyma.14G078200' => 'gma', 'Glyma.15G074500' => 'gma', 'Glyma.15G094100' => 'gma', 'Glyma.17G247200' => 'gma', 'Glyma.18G120100' => 'gma', 'Glyma.20G176000' => 'gma', 'Gohir.A01G063600' => 'ghi', 'Gohir.A01G170301' => 'ghi', 'Gohir.A02G060500' => 'ghi', 'Gohir.A05G133850' => 'ghi', 'Gohir.A05G161400' => 'ghi', 'Gohir.A06G012900' => 'ghi', 'Gohir.A06G035901' => 'ghi', 'Gohir.A06G127100' => 'ghi', 'Gohir.A06G210500' => 'ghi', 'Gohir.A08G008650' => 'ghi', 'Gohir.A09G072700' => 'ghi', 'Gohir.A09G088301' => 'ghi', 'Gohir.A10G040600' => 'ghi', 'Gohir.A12G036300' => 'ghi', 'Gohir.A12G143350' => 'ghi', 'Gohir.A12G165500' => 'ghi', 'Gohir.A13G145700' => 'ghi', 'Gohir.D01G050000' => 'ghi', 'Gohir.D01G051366' => 'ghi', 'Gohir.D01G161350' => 'ghi', 'Gohir.D02G065900' => 'ghi', 'Gohir.D05G164200' => 'ghi', 'Gohir.D05G355500' => 'ghi', 'Gohir.D06G010400' => 'ghi', 'Gohir.D06G111250' => 'ghi', 'Gohir.D06G132000' => 'ghi', 'Gohir.D06G210500' => 'ghi', 'Gohir.D07G165675' => 'ghi', 'Gohir.D08G062240' => 'ghi', 'Gohir.D08G086101' => 'ghi', 'Gohir.D08G138060' => 'ghi', 'Gohir.D09G072300' => 'ghi', 'Gohir.D10G041400' => 'ghi', 'Gohir.D11G191020' => 'ghi', 'Gohir.D11G212066' => 'ghi', 'Gohir.D12G036300' => 'ghi', 'Gohir.D12G168600' => 'ghi', 'Gohir.D13G150600' => 'ghi', 'Gorai.001G057300' => 'gra', 'Gorai.002G069900' => 'gra', 'Gorai.002G200000' => 'gra', 'Gorai.003G067600' => 'gra', 'Gorai.005G074800' => 'gra', 'Gorai.006G087300' => 'gra', 'Gorai.008G037500' => 'gra', 'Gorai.008G181400' => 'gra', 'Gorai.009G169400' => 'gra', 'Gorai.009G387900' => 'gra', 'Gorai.010G013300' => 'gra', 'Gorai.010G153800' => 'gra', 'Gorai.010G255800' => 'gra', 'Gorai.011G043700' => 'gra', 'Gorai.011G198900' => 'gra', 'Gorai.013G168400' => 'gra', 'GSVIVG01005212001' => 'vvi', 'GSVIVG01006163001' => 'vvi', 'GSVIVG01009625001' => 'vvi', 'GSVIVG01014338001' => 'vvi', 'GSVIVG01020005001' => 'vvi', 'GSVIVG01021450001' => 'vvi', 'GSVIVG01023975001' => 'vvi', 'GSVIVG01034490001' => 'vvi', 'HanXRQChr04g0112071' => 'han', 'HanXRQChr05g0131151' => 'han', 'HanXRQChr09g0262371' => 'han', 'HanXRQChr09g0268401' => 'han', 'HanXRQChr10g0279241' => 'han', 'HanXRQChr10g0297961' => 'han', 'HanXRQChr11g0326231' => 'han', 'HanXRQChr11g0328471' => 'han', 'HanXRQChr16g0507941' => 'han', 'HanXRQChr17g0560211' => 'han', 'Haze_02108' => 'cav', 'Haze_02428' => 'cav', 'Haze_05593' => 'cav', 'Haze_06448' => 'cav', 'Haze_09427' => 'cav', 'Haze_12022' => 'cav', 'Haze_17612' => 'cav', 'Haze_17928' => 'cav', 'Hma1.2p1_0032F.1_g019250' => 'hma', 'Hma1.2p1_0163F.1_g072690' => 'hma', 'Hma1.2p1_0265F.1_g106710' => 'hma', 'Hma1.2p1_0286F.1_g113970' => 'hma', 'Hma1.2p1_0363F.1_g136640' => 'hma', 'Hma1.2p1_0584F.1_g183470' => 'hma', 'Hma1.2p1_0885F.1_g232570' => 'hma', 'HPP92_006022' => 'vpl', 'HPP92_007320' => 'vpl', 'HPP92_011521' => 'vpl', 'HPP92_019387' => 'vpl', 'HPP92_024038' => 'vpl', 'Hund05891' => 'sun', 'Hund06450' => 'sun', 'Hund12053' => 'sun', 'Hund16800' => 'sun', 'Hund21222' => 'sun', 'Hund22896' => 'sun', 'Hund23746' => 'sun', 'Hund27083' => 'sun', 'Lalb_Chr02g0141831' => 'lal', 'Lalb_Chr02g0141841' => 'lal', 'Lalb_Chr05g0220411' => 'lal', 'Lalb_Chr06g0162081' => 'lal', 'Lalb_Chr09g0327651' => 'lal', 'Lalb_Chr13g0295051' => 'lal', 'Lalb_Chr15g0086801' => 'lal', 'Lalb_Chr16g0383781' => 'lal', 'Lalb_Chr16g0383791' => 'lal', 'Lalb_Chr18g0055441' => 'lal', 'Lalb_Chr18g0059611' => 'lal', 'Lalb_Chr20g0109661' => 'lal', 'Lalb_Chr20g0109831' => 'lal', 'Lalb_Chr20g0121871' => 'lal', 'Lalb_Chr22g0355361' => 'lal', 'Lalb_Chr25g0286371' => 'lal', 'Lj1A1187G43' => 'lonja', 'Lj1A1205T50' => 'lonja', 'Lj1A800G33' => 'lonja', 'Lj1C1187T7' => 'lonja', 'Lj1C843T11' => 'lonja', 'Lj1g0010940' => 'lja', 'Lj2A288T69' => 'lonja', 'Lj3g0024276' => 'lja', 'Lj4A47T76' => 'lonja', 'Lj4g0005805' => 'lja', 'Lj4g0006097' => 'lja', 'Lj4g0008528' => 'lja', 'Lj4g0024907' => 'lja', 'Lj5g0012472' => 'lja', 'Lj5g0018648' => 'lja', 'Lj6C789G1' => 'lonja', 'Lj6g0004000' => 'lja', 'Lj7A292G67' => 'lonja', 'Lj7A292T64' => 'lonja', 'Lj9A400T58' => 'lonja', 'Lsat_1_v5_gn_1_126181' => 'lsa', 'Lsat_1_v5_gn_4_123041' => 'lsa', 'Lsat_1_v5_gn_4_133620' => 'lsa', 'Lsat_1_v5_gn_4_53221' => 'lsa', 'Lsat_1_v5_gn_4_71961' => 'lsa', 'Lsat_1_v5_gn_7_105241' => 'lsa', 'Lsat_1_v5_gn_7_21361' => 'lsa', 'Lsat_1_v5_gn_7_28860' => 'lsa', 'Lsat_1_v5_gn_7_31260' => 'lsa', 'Lsat_1_v5_gn_8_52801' => 'lsa', 'Manes.02G191400' => 'mes', 'Manes.03G110100' => 'mes', 'Manes.04G071100' => 'mes', 'Manes.05G100500' => 'mes', 'Manes.05G164700' => 'mes', 'Manes.15G087000' => 'mes', 'Manes.15G121500' => 'mes', 'Manes.16G028300' => 'mes', 'Manes.17G046100' => 'mes', 'Manes.17G069800' => 'mes', 'Manes.18G100500' => 'mes', 'Mapoly0002s0109' => 'mpo', 'Mapoly0024s0007' => 'mpo', 'Mapoly0089s0032' => 'mpo', 'MBI04_g42241_MAGBIO' => 'mbi', 'MBI05_g11988_MAGBIO' => 'mbi', 'MBI05_g35452_MAGBIO' => 'mbi', 'MBI07_g30179_MAGBIO' => 'mbi', 'MBI07_g35859_MAGBIO' => 'mbi', 'MBI07_g35860_MAGBIO' => 'mbi', 'MBI07_g37166_MAGBIO' => 'mbi', 'MBI08_g18172_MAGBIO' => 'mbi', 'MBI09_g08441_MAGBIO' => 'mbi', 'MBI13_g01676_MAGBIO' => 'mbi', 'MBI14_g42955_MAGBIO' => 'mbi', 'MBI16_g13161_MAGBIO' => 'mbi', 'MBI17_g27204_MAGBIO' => 'mbi', 'MBI19_g21595_MAGBIO' => 'mbi', 'MD00G1148400' => 'mdo', 'MD02G1301200' => 'mdo', 'MD03G1227800' => 'mdo', 'MD05G1041100' => 'mdo', 'MD05G1124800' => 'mdo', 'MD05G1284000' => 'mdo', 'MD05G1338800' => 'mdo', 'MD05G1338900' => 'mdo', 'MD07G1022800' => 'mdo', 'MD10G1047500' => 'mdo', 'MD10G1127500' => 'mdo', 'MD10G1262300' => 'mdo', 'MD10G1293800' => 'mdo', 'MD16G1074300' => 'mdo', 'Medtr1g021670' => 'mtr', 'Medtr1g096320' => 'mtr', 'Medtr2g013690' => 'mtr', 'Medtr2g019450' => 'mtr', 'Medtr2g085170' => 'mtr', 'Medtr4g088785' => 'mtr', 'Medtr8g055930' => 'mtr', 'Medtr8g085850' => 'mtr', 'MELO3C002605.2' => 'cme', 'MELO3C003891.2' => 'cme', 'MELO3C004012.2' => 'cme', 'MELO3C007134.2' => 'cme', 'MELO3C008118.2' => 'cme', 'MELO3C016700.2' => 'cme', 'MELO3C024127.2' => 'cme', 'MELO3C033361.2' => 'cme', 'MELO3C033362.2' => 'cme', 'Migut.C00430' => 'egut', 'Migut.C01246' => 'egut', 'Migut.E00101' => 'egut', 'Migut.H01486' => 'egut', 'Migut.H01939' => 'egut', 'Migut.K00360' => 'egut', 'Migut.M00910' => 'egut', 'Migut.M01139' => 'egut', 'Migut.N02677' => 'egut', 'MSTRG.13252' => 'ama', 'MSTRG.14701' => 'ama', 'MSTRG.1521' => 'ama', 'MSTRG.15884' => 'ama', 'MSTRG.16242' => 'ama', 'MSTRG.22285' => 'ama', 'MSTRG.22444' => 'ama', 'MSTRG.2349' => 'ama', 'MSTRG.26308' => 'ama', 'MSTRG.28296' => 'ama', 'MSTRG.9895' => 'ama', 'Nitab4.5_0000110g0060' => 'nta', 'Nitab4.5_0000420g0130' => 'nta', 'Nitab4.5_0000422g0030' => 'nta', 'Nitab4.5_0000560g0180' => 'nta', 'Nitab4.5_0000703g0100' => 'nta', 'Nitab4.5_0000786g0200' => 'nta', 'Nitab4.5_0001336g0020' => 'nta', 'Nitab4.5_0001796g0030' => 'nta', 'Nitab4.5_0003348g0060' => 'nta', 'Nitab4.5_0003698g0040' => 'nta', 'Nitab4.5_0003942g0090' => 'nta', 'Nitab4.5_0004775g0070' => 'nta', 'Nitab4.5_0004864g0030' => 'nta', 'Nitab4.5_0005615g0020' => 'nta', 'Nitab4.5_0009288g0030' => 'nta', 'Nitab4.5_0009341g0010' => 'nta', 'Nitab4.5_0009535g0010' => 'nta', 'Nn1g03995' => 'nnu', 'Nn1g04100' => 'nnu', 'Nn1g06530' => 'nnu', 'Nn3g16404' => 'nnu', 'Nn3g17212' => 'nnu', 'Nn3g20776' => 'nnu', 'Nn3g21923' => 'nnu', 'Nn5g27737' => 'nnu', 'Nn5g29461' => 'nnu', 'Nn7g38355' => 'nnu', 'Nn8g39873' => 'nnu', 'Oeu000548.2' => 'oeu', 'Oeu004672.1' => 'oeu', 'Oeu015605.2' => 'oeu', 'Oeu016092.1' => 'oeu', 'Oeu017879.3' => 'oeu', 'Oeu024910.1' => 'oeu', 'Oeu028965.1' => 'oeu', 'Oeu031269.1' => 'oeu', 'Oeu031270.1' => 'oeu', 'Oeu032535.1' => 'oeu', 'Oeu034151.1' => 'oeu', 'Oeu034152.1' => 'oeu', 'Oeu034588.2' => 'oeu', 'Oeu050846.1' => 'oeu', 'Oeu050849.2' => 'oeu', 'Oeu051063.2' => 'oeu', 'Oeu052368.1' => 'oeu', 'Oeu052370.1' => 'oeu', 'Os01g0210400' => 'osa', 'Os01g0304300' => 'osa', 'Os01g0749100' => 'osa', 'Os02g0745800' => 'osa', 'Os03g0769050' => 'osa', 'Os05g0531500' => 'osa', 'Os06g0724300' => 'osa', 'Os11g0198100' => 'osa', 'Peaxi162Scf00069g01425' => 'pax', 'Peaxi162Scf00280g00811' => 'pax', 'Peaxi162Scf00310g00615' => 'pax', 'Peaxi162Scf00362g00542' => 'pax', 'Peaxi162Scf00461g00310' => 'pax', 'Peaxi162Scf00530g00118' => 'pax', 'Peaxi162Scf00541g00057' => 'pax', 'Peaxi162Scf00661g00017' => 'pax', 'Peaxi162Scf00926g00027' => 'pax', 'Peaxi162Scf01064g00263' => 'pax', 'Peaxi162Scf01211g00135' => 'pax', 'PGR004G2336' => 'pgr', 'PGR042G0327' => 'pgr', 'PGR042G1957' => 'pgr', 'PGR042G2003' => 'pgr', 'PGR042G3929' => 'pgr', 'PGR083G1137' => 'pgr', 'PGR083G1364' => 'pgr', 'PGSC0003DMG400003381' => 'stu', 'PGSC0003DMG400003417' => 'stu', 'PGSC0003DMG400008981' => 'stu', 'PGSC0003DMG400012417' => 'stu', 'PGSC0003DMG400012823' => 'stu', 'PGSC0003DMG400016885' => 'stu', 'PGSC0003DMG400022812' => 'stu', 'PGSC0003DMG400029726' => 'stu', 'PGSC0003DMG401009243' => 'stu', 'PGSC0003DMG401031505' => 'stu', 'PGSC0003DMG402031505' => 'stu', 'Phvul.001G017600' => 'pvu', 'Phvul.002G193500' => 'pvu', 'Phvul.002G228900' => 'pvu', 'Phvul.002G236800' => 'pvu', 'Phvul.003G049500' => 'pvu', 'Phvul.005G072000' => 'pvu', 'Phvul.006G164800' => 'pvu', 'Phvul.006G185100' => 'pvu', 'Phvul.007G090000' => 'pvu', 'Potri.001G399800' => 'ptr', 'Potri.002G149900' => 'ptr', 'Potri.004G044100' => 'ptr', 'Potri.004G177600' => 'ptr', 'Potri.009G138000' => 'ptr', 'Potri.010G094000' => 'ptr', 'Potri.011G053000' => 'ptr', 'Potri.011G119300' => 'ptr', 'Potri.013G113700' => 'ptr', 'Potri.018G107800' => 'ptr', 'Potri.019G084100' => 'ptr', 'Pp3c14_23720' => 'ppa', 'Pp3c16_6340' => 'ppa', 'Pp3c23_13420' => 'ppa', 'Pp3c24_2740' => 'ppa', 'Pp3c25_860' => 'ppa', 'Pp3c8_21750' => 'ppa', 'Prupe.1G273000' => 'ppe', 'Prupe.1G273700' => 'ppe', 'Prupe.1G274100' => 'ppe', 'Prupe.2G023300' => 'ppe', 'Prupe.4G048000' => 'ppe', 'Prupe.4G080400' => 'ppe', 'Prupe.4G181200' => 'ppe', 'Prupe.8G056900' => 'ppe', 'Prupe.8G168700' => 'ppe', 'Psat1g189080' => 'psa', 'Psat1g204760' => 'psa', 'Psat4g175560' => 'psa', 'Psat4g177720' => 'psa', 'Psat5g244240' => 'psa', 'Psat6g010720' => 'psa', 'Psat6g187200' => 'psa', 'Psat7g072040' => 'psa', 'PSO017G3501' => 'pso', 'PSO063G2148' => 'pso', 'PSO063G5608' => 'pso', 'PSO210G6392' => 'pso', 'PSO541G2319' => 'pso', 'PSO541G2836' => 'pso', 'PSO541G4012' => 'pso', 'PSO541G6253' => 'pso', 'PSO675G0580' => 'pso', 'PSO675G0856' => 'pso', 'PSO675G5635' => 'pso', 'PSO675G9157' => 'pso', 'PSO832G1660' => 'pso', 'PSO832G1969' => 'pso', 'QL02p007186' => 'qlo', 'QL02p033904' => 'qlo', 'QL03p064391' => 'qlo', 'QL05p040593' => 'qlo', 'QL05p058242' => 'qlo', 'QL08p021825' => 'qlo', 'QL11p004981' => 'qlo', 'RcHm_v2.0_Chr1g0318301' => 'rch', 'RcHm_v2.0_Chr4g0418501' => 'rch', 'RcHm_v2.0_Chr4g0439971' => 'rch', 'RcHm_v2.0_Chr5g0008541' => 'rch', 'RcHm_v2.0_Chr5g0014101' => 'rch', 'RcHm_v2.0_Chr5g0014131' => 'rch', 'RcHm_v2.0_Chr5g0033621' => 'rch', 'RcHm_v2.0_Chr6g0272041' => 'rch', 'RcHm_v2.0_Chr6g0278831' => 'rch', 'Rhsim02G0130400' => 'rsi', 'Rhsim02G0171100' => 'rsi', 'Rhsim05G0053000' => 'rsi', 'Rhsim05G0053100' => 'rsi', 'Rhsim06G0096500' => 'rsi', 'Rhsim06G0096600' => 'rsi', 'Rhsim06G0199100' => 'rsi', 'Rhsim12G0062300' => 'rsi', 'Rhsim12G0062800' => 'rsi', 'Sabra02G0118600' => 'sbr', 'Sabra04G0027300' => 'sbr', 'Sabra04G0119500' => 'sbr', 'Sabra08G0112500' => 'sbr', 'Sabra11G0036800' => 'sbr', 'Sabra11G0103800' => 'sbr', 'Sabra13G0096300' => 'sbr', 'Sabra16G0262300' => 'sbr', 'Sabra18G0091700' => 'sbr', 'Sabra19G0095400' => 'sbr', 'SalBow6G3080' => 'sbo', 'SalBow7G1157' => 'sbo', 'SalBow7G2123' => 'sbo', 'SalBow7G2285' => 'sbo', 'SalBow7G3537' => 'sbo', 'SalBow8G2947' => 'sbo', 'SalBow8G4463' => 'sbo', 'SalBow8G5466' => 'sbo', 'Sc01g0001750' => 'sci', 'Sc02g0006640' => 'sci', 'Sc02g0006670' => 'sci', 'Sc04g0008220' => 'sci', 'Sc05g0006190' => 'sci', 'Sc08g0002760' => 'sci', 'Sc17g0006170' => 'sci', 'Sc22g0002050' => 'sci', 'Sc23g0001190' => 'sci', 'Sc24g0000980' => 'sci', 'Sed0006245' => 'sed', 'Sed0007543' => 'sed', 'Sed0009411' => 'sed', 'Sed0010765' => 'sed', 'Sed0012944' => 'sed', 'Sed0014682' => 'sed', 'Sed0016174' => 'sed', 'Sed0016796' => 'sed', 'Sed0020317' => 'sed', 'Sed0021467' => 'sed', 'SEGI_01316' => 'sgi', 'SEGI_03374' => 'sgi', 'SEGI_16265' => 'sgi', 'SEGI_18569' => 'sgi', 'SEGI_20351' => 'sgi', 'SEGI_26395' => 'sgi', 'SEGI_29469' => 'sgi', 'SEGI_34771' => 'sgi', 'SEGI_36769' => 'sgi', 'SEGI_37139' => 'sgi', 'SGA_v2.0_scaffold100G29687' => 'sas', 'SGA_v2.0_scaffold118G32472' => 'sas', 'SGA_v2.0_scaffold14G07051' => 'sas', 'SGA_v2.0_scaffold183G39845' => 'sas', 'SGA_v2.0_scaffold1G00174' => 'sas', 'SGA_v2.0_scaffold22G09714' => 'sas', 'SGA_v2.0_scaffold333G48992' => 'sas', 'SGA_v2.0_scaffold46G17491' => 'sas', 'SGA_v2.0_scaffold49G18294' => 'sas', 'SGA_v2.0_scaffold63G21658' => 'sas', 'SHI01741' => 'shi', 'SHI05771' => 'shi', 'SHI18077' => 'shi', 'SHI20525' => 'shi', 'SHI20527' => 'shi', 'SHI20528' => 'shi', 'SMO172G0185' => 'smo', 'SMO198G0020' => 'smo', 'SMO351G0006' => 'smo', 'SMO356G0118' => 'smo', 'SMO358G0296' => 'smo', 'SMO367G0079' => 'smo', 'SMO367G1277' => 'smo', 'Solyc01g014220.3' => 'sly', 'Solyc01g111770.2' => 'sly', 'Solyc02g078180.3' => 'sly', 'Solyc03g006430.3' => 'sly', 'Solyc03g006456.1' => 'sly', 'Solyc03g079860.2' => 'sly', 'Solyc04g079770.3' => 'sly', 'Solyc05g007430.4' => 'sly', 'Solyc07g063150.3' => 'sly', 'Solyc08g016620.3' => 'sly', 'Solyc09g057590.3' => 'sly', 'Solyc09g057600.1' => 'sly', 'Solyc10g009050.3' => 'sly', 'Solyc11g017420.2' => 'sly', 'Sopen01g053810' => 'spe', 'Sopen02g023040' => 'spe', 'Sopen03g002440' => 'spe', 'Sopen04g033350' => 'spe', 'Sopen05g003310' => 'spe', 'Sopen07g004050' => 'spe', 'Sopen07g031340' => 'spe', 'Sopen08g006990' => 'spe', 'Sopen10g004830' => 'spe', 'Sopen11g009370' => 'spe', 'Sp1g24450' => 'spa', 'Sp1g29670' => 'spa', 'Sp1g39600' => 'spa', 'Sp2g11080' => 'spa', 'Sp2g13970' => 'spa', 'Sp4g16130' => 'spa', 'Sp6g13080' => 'spa', 'Sp7g37270' => 'spa', 'TAR371G0065' => 'tar', 'TAR376G0340' => 'tar', 'TAR376G0435' => 'tar', 'TAR381G0002' => 'tar', 'TAR381G1236' => 'tar', 'TAR624G0055' => 'tar', 'TAR624G0324' => 'tar', 'TAR624G0696' => 'tar', 'TAR624G0906' => 'tar', 'TAR625G0107' => 'tar', 'TAR626G0015' => 'tar', 'TAR626G1356' => 'tar', 'TAR627G0888' => 'tar', 'TAR628G0399' => 'tar', 'TAR628G1327' => 'tar', 'TAR629G2831' => 'tar', 'TAR629G2874' => 'tar', 'TAR633G1432' => 'tar', 'TAR633G2771' => 'tar', 'THA.LOC104803394' => 'tha', 'THA.LOC104805153' => 'tha', 'THA.LOC104806784' => 'tha', 'THA.LOC104810473' => 'tha', 'THA.LOC104813100' => 'tha', 'THA.LOC104814215' => 'tha', 'THA.LOC104815554' => 'tha', 'THA.LOC104820544' => 'tha', 'THA.LOC104824754' => 'tha', 'THA.LOC104827717' => 'tha', 'Thecc.02G031400' => 'tca', 'Thecc.02G055900' => 'tca', 'Thecc.02G350800' => 'tca', 'Thecc.06G150900' => 'tca', 'Thecc.06G186600' => 'tca', 'Thecc.07G089600' => 'tca', 'Thecc.08G020400' => 'tca', 'Thecc.08G182100' => 'tca', 'Thhalv10000873m.g' => 'esa', 'Thhalv10004185m.g' => 'esa', 'Thhalv10006981m.g' => 'esa', 'Thhalv10007204m.g' => 'esa', 'Thhalv10011374m.g' => 'esa', 'Thhalv10013482m.g' => 'esa', 'Thhalv10017801m.g' => 'esa', 'Thhalv10024983m.g' => 'esa', 'TPR.G12072' => 'tpr', 'TPR.G15769' => 'tpr', 'TPR.G16504' => 'tpr', 'TPR.G16506' => 'tpr', 'TPR.G24345' => 'tpr', 'TPR.G26666' => 'tpr', 'TPR.G27320' => 'tpr', 'TPR.G31819' => 'tpr', 'TPR.G38879' => 'tpr', 'TPR.G39015' => 'tpr', 'TPR.G8819' => 'tpr', 'TWI09G0924' => 'twi', 'TWI12G0811' => 'twi', 'TWI12G1294' => 'twi', 'TWI31G0150' => 'twi', 'TWI36G1262' => 'twi', 'TWI38G1287' => 'twi', 'TWI38G1633' => 'twi', 'TWI38G1982' => 'twi', 'TWI39G0116' => 'twi', 'TWI60G1011' => 'twi', 'TWI63G0171' => 'twi', 'TWI73G0839' => 'twi', 'TWI79G1511' => 'twi', 'unitig_0.g915' => 'ugi', 'unitig_0.g916' => 'ugi', 'unitig_21.g20219' => 'ugi', 'unitig_21.g20416' => 'ugi', 'unitig_578.g16132' => 'ugi', 'unitig_578.g16718' => 'ugi', 'unitig_62.g23481' => 'ugi', 'unitig_744.g24535' => 'ugi', 'unitig_749.g13525' => 'ugi', 'vmacro01248' => 'vma', 'vmacro02290' => 'vma', 'vmacro10946' => 'vma', 'vmacro11865' => 'vma', 'vmacro12493' => 'vma', 'vmacro17322' => 'vma', 'vmacro21599' => 'vma', 'vmacro23041' => 'vma', 'VMungo0251G0004' => 'vmu', 'VMungo0251G2639' => 'vmu', 'VMungo0251G2967' => 'vmu', 'VMungo0540G0864' => 'vmu', 'VMungo0540G1569' => 'vmu', 'VMungo0647G0317' => 'vmu', 'VMungo0720G1373' => 'vmu', 'VMungo0720G1508' => 'vmu', 'VMungo1080G0485' => 'vmu', 'VMungo1215G3177' => 'vmu', 'Zm00001eb112600' => 'zma', 'Zm00001eb120220' => 'zma', 'Zm00001eb153240' => 'zma', 'Zm00001eb168880' => 'zma', 'Zm00001eb213920' => 'zma', 'Zm00001eb228280' => 'zma', 'Zm00001eb254580' => 'zma', 'Zm00001eb272180' => 'zma', 'Zm00001eb293190' => 'zma', 'Zm00001eb322930' => 'zma', 'Zm00001eb353360' => 'zma', 'Zm00001eb353390' => 'zma', 'Zm00001eb353430' => 'zma', 'Zm00001eb353440' => 'zma', 'Zm00001eb353780' => 'zma' ), 'gf_id' => 'HOM05D000499', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000499' ), 'data_identifier' => 'HOM05D000499', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000499', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1066', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p29780' => 'bna', 'A02p33180' => 'bna', 'A03p16470' => 'bna', 'A03p66010' => 'bna', 'A04p25970' => 'bna', 'A06p01270' => 'bna', 'A06p46080' => 'bna', 'A07p11400' => 'bna', 'A08p01840' => 'bna', 'A08p08230' => 'bna', 'A08p25740' => 'bna', 'A09p32070' => 'bna', 'A09p37830' => 'bna', 'A09p42840' => 'bna', 'A09p42850' => 'bna', 'Aa31LG10G2060' => 'aar', 'Aa31LG2G7410' => 'aar', 'Aa31LG6G10200' => 'aar', 'Aa31LG6G16680' => 'aar', 'Aa31LG6G8470' => 'aar', 'Aa31LG9G12730' => 'aar', 'Aa31LG9G13680' => 'aar', 'Aa31LG9G14920' => 'aar', 'Aa31LG9G6650' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4977' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5467' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3254' => 'aag', 'Actinidia02578' => 'ach', 'Actinidia07693' => 'ach', 'Actinidia08413' => 'ach', 'Actinidia08414' => 'ach', 'Actinidia15289' => 'ach', 'Actinidia19871' => 'ach', 'Actinidia21475' => 'ach', 'Actinidia22576' => 'ach', 'Actinidia28327' => 'ach', 'Actinidia32491' => 'ach', 'Actinidia39463' => 'ach', 'Actinidia39571' => 'ach', 'Ah.01g013750' => 'amhyb', 'Ah.01g023210' => 'amhyb', 'Ah.04g164850' => 'amhyb', 'Ah.05g178060' => 'amhyb', 'Ah.07g204270' => 'amhyb', 'Ah.07g208480' => 'amhyb', 'Ah.09g237410' => 'amhyb', 'Ah.14g089460' => 'amhyb', 'AL1G41790' => 'aly', 'AL1G49050' => 'aly', 'AL1G53810' => 'aly', 'AL1G61400' => 'aly', 'AL4G18580' => 'aly', 'AL5G12510' => 'aly', 'AL5G12540' => 'aly', 'AL6G43230' => 'aly', 'AL7G10370' => 'aly', 'AL7G19250' => 'aly', 'AL8G12240' => 'aly', 'AL8G18540' => 'aly', 'Aqoxy1G02409' => 'aox', 'Aqoxy2G03993' => 'aox', 'Aqoxy3G03357' => 'aox', 'Aqoxy4G00785' => 'aox', 'Aqoxy5G02598' => 'aox', 'Aqoxy6G00132' => 'aox', 'Aqoxy7G01776' => 'aox', 'Aqoxy7G02316' => 'aox', 'Aqoxy7G03973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.12AFKW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B8730' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27IQR1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3F75VG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3RE0GA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41TCQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.527VTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FIR39' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5W8UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DA38EV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ63HS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H1I32C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HC27T5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4M8AP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7N3CZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9UVDZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LS1NQA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT1D4B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SKC4TM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCFV76' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF9Q1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQWD9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1ZM88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WE07RT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YCK7VH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJE6Q6' => 'arhy', 'AT1G28240' => 'ath', 'AT1G34550' => 'ath', 'AT1G53040' => 'ath', 'AT2G02910' => 'ath', 'AT4G09630' => 'ath', 'AT4G38500' => 'ath', 'AT5G42660' => 'ath', 'AT5G46220' => 'ath', 'ATR0152G026' => 'atr', 'ATR0564G343' => 'atr', 'ATR0706G151' => 'atr', 'ATR0733G207' => 'atr', 'ATR0751G234' => 'atr', 'ATR0807G048' => 'atr', 'ATR1091G084' => 'atr', 'Atru.chr10.1229' => 'acertr', 'Atru.chr10.1230' => 'acertr', 'Atru.chr10.1874' => 'acertr', 'Atru.chr11.1808' => 'acertr', 'Atru.chr13.1795' => 'acertr', 'Atru.chr13.570' => 'acertr', 'Atru.chr2.2608' => 'acertr', 'Atru.chr2.2609' => 'acertr', 'Atru.chr5.3428' => 'acertr', 'Atru.chr8.1171' => 'acertr', 'AUR62004651' => 'cqu', 'AUR62008675' => 'cqu', 'AUR62010014' => 'cqu', 'AUR62013004' => 'cqu', 'AUR62014825' => 'cqu', 'AUR62015015' => 'cqu', 'AUR62015151' => 'cqu', 'AUR62017020' => 'cqu', 'AUR62019422' => 'cqu', 'AUR62023570' => 'cqu', 'AUR62025571' => 'cqu', 'AUR62029098' => 'cqu', 'AUR62033863' => 'cqu', 'AUR62034296' => 'cqu', 'AUR62040075' => 'cqu', 'BcaB02g07334' => 'bca', 'BcaB02g10575' => 'bca', 'BcaB03g12119' => 'bca', 'BcaB03g12120' => 'bca', 'BcaB03g13945' => 'bca', 'BcaB04g17123' => 'bca', 'BcaB04g17867' => 'bca', 'BcaB04g19839' => 'bca', 'BcaB07g30317' => 'bca', 'BcaB07g32432' => 'bca', 'BcaB07g33362' => 'bca', 'BcaB08g36611' => 'bca', 'BcaC01g00028' => 'bca', 'BcaC01g01356' => 'bca', 'BcaC01g02034' => 'bca', 'BcaC01g06051' => 'bca', 'BcaC03g16839' => 'bca', 'BcaC03g17176' => 'bca', 'BcaC05g26829' => 'bca', 'BcaC06g31490' => 'bca', 'BcaC06g35344' => 'bca', 'BcaC06g36570' => 'bca', 'BcaC07g37537' => 'bca', 'BcaC08g43491' => 'bca', 'BcaC08g43773' => 'bca', 'BcaNung00234' => 'bca', 'BcaNung01982' => 'bca', 'BcaNung03707' => 'bca', 'BcaNung06454' => 'bca', 'BolC2t10762H' => 'bol', 'BolC2t11191H' => 'bol', 'BolC3t14322H' => 'bol', 'BolC3t19747H' => 'bol', 'BolC3t21425H' => 'bol', 'BolC4t27800H' => 'bol', 'BolC5t31423H' => 'bol', 'BolC6t35951H' => 'bol', 'BolC6t36282H' => 'bol', 'BolC7t40678H' => 'bol', 'BolC7t40679H' => 'bol', 'BolC7t42222H' => 'bol', 'BolC7t43492H' => 'bol', 'BolC7t46785H' => 'bol', 'BolC8t47853H' => 'bol', 'BolC9t56805H' => 'bol', 'BraA02t08000Z' => 'bra', 'BraA02t08341Z' => 'bra', 'BraA03t10936Z' => 'bra', 'BraA03t15657Z' => 'bra', 'BraA04t18100Z' => 'bra', 'BraA05t20523Z' => 'bra', 'BraA06t23353Z' => 'bra', 'BraA06t27473Z' => 'bra', 'BraA06t27769Z' => 'bra', 'BraA07t28928Z' => 'bra', 'BraA08t32236Z' => 'bra', 'BraA08t32841Z' => 'bra', 'BraA08t34524Z' => 'bra', 'BraA09t38742Z' => 'bra', 'BraA09t39295Z' => 'bra', 'C02p47180' => 'bna', 'C02p50990' => 'bna', 'C03p19360' => 'bna', 'C03p74950' => 'bna', 'C03p91000' => 'bna', 'C04p63260' => 'bna', 'C05p27050' => 'bna', 'C06p08750' => 'bna', 'C06p11490' => 'bna', 'C07p02820' => 'bna', 'C07p17180' => 'bna', 'C07p29440' => 'bna', 'C07p63730' => 'bna', 'C09p39260' => 'bna', 'CAN.G1164.34' => 'can', 'CAN.G1164.39' => 'can', 'CAN.G1530.3' => 'can', 'CAN.G162.61' => 'can', 'CAN.G176.6' => 'can', 'CAN.G289.49' => 'can', 'CAN.G370.21' => 'can', 'CAN.G370.22' => 'can', 'CAN.G371.117' => 'can', 'CAN.G58.37' => 'can', 'CAN.G588.98' => 'can', 'CANSAT21G2266' => 'cansat', 'CANSAT25G2799' => 'cansat', 'CANSAT35G0862' => 'cansat', 'CANSAT35G1704' => 'cansat', 'CANSAT35G1760' => 'cansat', 'CANSAT56G3971' => 'cansat', 'CANSAT56G4116' => 'cansat', 'CANSAT80G1259' => 'cansat', 'CARHR027730' => 'chi', 'CARHR033880' => 'chi', 'CARHR043270' => 'chi', 'CARHR145330' => 'chi', 'CARHR145340' => 'chi', 'CARHR175570' => 'chi', 'CARHR181570' => 'chi', 'CARHR258470' => 'chi', 'CARHR260490' => 'chi', 'CARHR294220' => 'chi', 'Carub.0001s2668' => 'cru', 'Carub.0001s3257' => 'cru', 'Carub.0001s4220' => 'cru', 'Carub.0005s0179' => 'cru', 'Carub.0006s2807' => 'cru', 'Carub.0007s0039' => 'cru', 'Carub.0008s0169' => 'cru', 'Carub.0008s0636' => 'cru', 'Ca_00338_v3' => 'car', 'Ca_00542_v3' => 'car', 'Ca_01844_v3' => 'car', 'Ca_10611_v3' => 'car', 'Ca_13326_v3' => 'car', 'Ca_17944_v3' => 'car', 'Ca_18546_v3' => 'car', 'Ca_24219_v3' => 'car', 'Ca_29972_v3' => 'car', 'CBR_g3681' => 'cbr', 'CBR_g40021' => 'cbr', 'Cc01_g08140' => 'ccan', 'Cc02_g13410' => 'ccan', 'Cc02_g37480' => 'ccan', 'Cc05_g12030' => 'ccan', 'Cc09_g03370' => 'ccan', 'Cc09_g10300' => 'ccan', 'Cc10_g03530' => 'ccan', 'Cc10_g11380' => 'ccan', 'CDE01G0176' => 'cde', 'CDE02G0675' => 'cde', 'CDE02G0942' => 'cde', 'CDE02G1153' => 'cde', 'CDE02G4177' => 'cde', 'CDE04G2117' => 'cde', 'CDE04G2736' => 'cde', 'CDE08G1161' => 'cde', 'CDE09G1238' => 'cde', 'Cfa000467' => 'cfa', 'Cfa000947' => 'cfa', 'Cfa004969' => 'cfa', 'Cfa005284' => 'cfa', 'Cfa008993' => 'cfa', 'Cfa018187' => 'cfa', 'Cfa018454' => 'cfa', 'Cfa020585' => 'cfa', 'Ciclev10000424m.g' => 'ccl', 'Ciclev10003605m.g' => 'ccl', 'Ciclev10007828m.g' => 'ccl', 'Ciclev10014620m.g' => 'ccl', 'Ciclev10015169m.g' => 'ccl', 'Ciclev10018291m.g' => 'ccl', 'Ciclev10028256m.g' => 'ccl', 'Ciclev10033822m.g' => 'ccl', 'CiPaw.05G060300' => 'cil', 'CiPaw.05G085000' => 'cil', 'CiPaw.06G083700' => 'cil', 'CiPaw.06G120300' => 'cil', 'CiPaw.09G060500' => 'cil', 'CiPaw.09G123800' => 'cil', 'CiPaw.11G169700' => 'cil', 'CiPaw.12G118300' => 'cil', 'CiPaw.15G071000' => 'cil', 'CiPaw.15G081900' => 'cil', 'ClCG01G024610' => 'cla', 'ClCG03G006070' => 'cla', 'ClCG05G019250' => 'cla', 'ClCG09G009500' => 'cla', 'ClCG11G008200' => 'cla', 'ClCG11G018080' => 'cla', 'COL.COLO4_17373' => 'col', 'COL.COLO4_22994' => 'col', 'COL.COLO4_26389' => 'col', 'COL.COLO4_27170' => 'col', 'COL.COLO4_31074' => 'col', 'COL.COLO4_31465' => 'col', 'COL.COLO4_36438' => 'col', 'COL.COLO4_36439' => 'col', 'Cpa.g.c38781' => 'cpa', 'Cpa.g.sc128.12' => 'cpa', 'Cpa.g.sc166.7' => 'cpa', 'Cpa.g.sc166.8' => 'cpa', 'Cpa.g.sc20.111' => 'cpa', 'Cpa.g.sc27.31' => 'cpa', 'Cpa.g.sc64.36' => 'cpa', 'Cpa.g.sc64.37' => 'cpa', 'Cpa.g.sc66.49' => 'cpa', 'Cpa.g.sc80.64' => 'cpa', 'CsaV3_1G012320' => 'csa', 'CsaV3_2G008480' => 'csa', 'CsaV3_2G033450' => 'csa', 'CsaV3_3G044830' => 'csa', 'CsaV3_4G033710' => 'csa', 'CsaV3_6G051730' => 'csa', 'CsaV3_7G025350' => 'csa', 'CSS0001067' => 'camsi', 'CSS0005996' => 'camsi', 'CSS0006590' => 'camsi', 'CSS0009673' => 'camsi', 'CSS0010201' => 'camsi', 'CSS0010549' => 'camsi', 'CSS0011364' => 'camsi', 'CSS0014473' => 'camsi', 'CSS0014961' => 'camsi', 'CSS0020191' => 'camsi', 'CSS0021165' => 'camsi', 'CSS0022306' => 'camsi', 'CSS0030591' => 'camsi', 'CSS0030696' => 'camsi', 'CSS0032653' => 'camsi', 'CSS0037487' => 'camsi', 'CSS0041102' => 'camsi', 'CSS0041261' => 'camsi', 'CSS0046246' => 'camsi', 'CSS0049256' => 'camsi', 'DCAR_004075' => 'dca', 'DCAR_011538' => 'dca', 'DCAR_019553' => 'dca', 'DCAR_020952' => 'dca', 'DCAR_021739' => 'dca', 'DCAR_027407' => 'dca', 'DCAR_027913' => 'dca', 'DCAR_028066' => 'dca', 'Dinv05899' => 'din', 'Dinv07563' => 'din', 'Dinv08010' => 'din', 'Dinv14125' => 'din', 'Dinv20172' => 'din', 'Dinv30743' => 'din', 'Dinv31229' => 'din', 'Dinv34162' => 'din', 'Dinv36028' => 'din', 'Dinv39368' => 'din', 'Dinv40565' => 'din', 'Dinv41706' => 'din', 'Duzib052G0089' => 'dzi', 'Duzib116G0641' => 'dzi', 'Duzib132G0069' => 'dzi', 'Duzib132G1219' => 'dzi', 'Duzib147G0278' => 'dzi', 'Duzib160G0480' => 'dzi', 'Duzib170G0661' => 'dzi', 'Duzib177G0591' => 'dzi', 'Duzib187G1353' => 'dzi', 'Duzib192G0858' => 'dzi', 'Duzib192G0883' => 'dzi', 'Duzib213G0506' => 'dzi', 'Duzib235G0289' => 'dzi', 'Duzib251G0422' => 'dzi', 'ECA232G3898' => 'eca', 'ECA233G5950' => 'eca', 'ECA234G1699' => 'eca', 'ECA234G2421' => 'eca', 'ECA236G0426' => 'eca', 'ECA236G4331' => 'eca', 'ECA248G2573' => 'eca', 'EL10Ac1g00077' => 'bvu', 'EL10Ac1g01746' => 'bvu', 'EL10Ac2g03464' => 'bvu', 'EL10Ac4g08176' => 'bvu', 'EL10Ac7g17521' => 'bvu', 'EL10Ac8g20386' => 'bvu', 'EL10Ac9g21343' => 'bvu', 'EL10Ac9g22688' => 'bvu', 'Eucgr.B03434' => 'egr', 'Eucgr.D00618' => 'egr', 'Eucgr.E02395' => 'egr', 'Eucgr.F01129' => 'egr', 'Eucgr.F02622' => 'egr', 'Eucgr.F04207' => 'egr', 'FAN01G0570' => 'fan', 'FAN03G3351' => 'fan', 'FAN06G3702' => 'fan', 'FAN07G2149' => 'fan', 'FAN10G3758' => 'fan', 'FAN11G1170' => 'fan', 'FAN11G2050' => 'fan', 'FAN11G2724' => 'fan', 'FAN12G1700' => 'fan', 'FAN12G2028' => 'fan', 'FAN15G1160' => 'fan', 'FAN15G3063' => 'fan', 'FAN16G2540' => 'fan', 'FAN16G3077' => 'fan', 'FAN16G3624' => 'fan', 'FAN17G0221' => 'fan', 'FAN20G2492' => 'fan', 'FAN20G2905' => 'fan', 'FAN21G0548' => 'fan', 'FAN21G1300' => 'fan', 'FAN22G0077' => 'fan', 'FAN22G1315' => 'fan', 'FAN24G1280' => 'fan', 'FAN24G1445' => 'fan', 'FAN24G3527' => 'fan', 'FAN25G0464' => 'fan', 'FAN25G2885' => 'fan', 'FAN25G3270' => 'fan', 'FAN27G1101' => 'fan', 'FAN27G2846' => 'fan', 'FAN27G3524' => 'fan', 'FvH4_2g11770' => 'fve', 'FvH4_2g15630' => 'fve', 'FvH4_3g05570' => 'fve', 'FvH4_3g09110' => 'fve', 'FvH4_3g19940' => 'fve', 'FvH4_4g04821' => 'fve', 'FvH4_4g31480' => 'fve', 'FvH4_7g01740' => 'fve', 'Glyma.05G130400' => 'gma', 'Glyma.05G156400' => 'gma', 'Glyma.07G197000' => 'gma', 'Glyma.08G085151' => 'gma', 'Glyma.08G114500' => 'gma', 'Glyma.08G300400' => 'gma', 'Glyma.10G215800' => 'gma', 'Glyma.12G224400' => 'gma', 'Glyma.13G179300' => 'gma', 'Glyma.13G218151' => 'gma', 'Glyma.13G238800' => 'gma', 'Glyma.13G276900' => 'gma', 'Glyma.14G078200' => 'gma', 'Glyma.15G074500' => 'gma', 'Glyma.15G094100' => 'gma', 'Glyma.17G247200' => 'gma', 'Glyma.18G120100' => 'gma', 'Glyma.20G176000' => 'gma', 'Gohir.A01G063600' => 'ghi', 'Gohir.A01G170301' => 'ghi', 'Gohir.A02G060500' => 'ghi', 'Gohir.A05G133850' => 'ghi', 'Gohir.A05G161400' => 'ghi', 'Gohir.A06G012900' => 'ghi', 'Gohir.A06G035901' => 'ghi', 'Gohir.A06G127100' => 'ghi', 'Gohir.A06G210500' => 'ghi', 'Gohir.A08G008650' => 'ghi', 'Gohir.A09G072700' => 'ghi', 'Gohir.A09G088301' => 'ghi', 'Gohir.A10G040600' => 'ghi', 'Gohir.A12G036300' => 'ghi', 'Gohir.A12G143350' => 'ghi', 'Gohir.A12G165500' => 'ghi', 'Gohir.A13G145700' => 'ghi', 'Gohir.D01G050000' => 'ghi', 'Gohir.D01G051366' => 'ghi', 'Gohir.D01G161350' => 'ghi', 'Gohir.D02G065900' => 'ghi', 'Gohir.D05G164200' => 'ghi', 'Gohir.D05G355500' => 'ghi', 'Gohir.D06G010400' => 'ghi', 'Gohir.D06G111250' => 'ghi', 'Gohir.D06G132000' => 'ghi', 'Gohir.D06G210500' => 'ghi', 'Gohir.D07G165675' => 'ghi', 'Gohir.D08G062240' => 'ghi', 'Gohir.D08G086101' => 'ghi', 'Gohir.D08G138060' => 'ghi', 'Gohir.D09G072300' => 'ghi', 'Gohir.D10G041400' => 'ghi', 'Gohir.D11G191020' => 'ghi', 'Gohir.D11G212066' => 'ghi', 'Gohir.D12G036300' => 'ghi', 'Gohir.D12G168600' => 'ghi', 'Gohir.D13G150600' => 'ghi', 'Gorai.001G057300' => 'gra', 'Gorai.002G069900' => 'gra', 'Gorai.002G200000' => 'gra', 'Gorai.003G067600' => 'gra', 'Gorai.005G074800' => 'gra', 'Gorai.006G087300' => 'gra', 'Gorai.008G037500' => 'gra', 'Gorai.008G181400' => 'gra', 'Gorai.009G169400' => 'gra', 'Gorai.009G387900' => 'gra', 'Gorai.010G013300' => 'gra', 'Gorai.010G153800' => 'gra', 'Gorai.010G255800' => 'gra', 'Gorai.011G043700' => 'gra', 'Gorai.011G198900' => 'gra', 'Gorai.013G168400' => 'gra', 'GSVIVG01005212001' => 'vvi', 'GSVIVG01006163001' => 'vvi', 'GSVIVG01009625001' => 'vvi', 'GSVIVG01014338001' => 'vvi', 'GSVIVG01020005001' => 'vvi', 'GSVIVG01021450001' => 'vvi', 'GSVIVG01023975001' => 'vvi', 'GSVIVG01034490001' => 'vvi', 'HanXRQChr04g0112071' => 'han', 'HanXRQChr05g0131151' => 'han', 'HanXRQChr09g0262371' => 'han', 'HanXRQChr09g0268401' => 'han', 'HanXRQChr10g0279241' => 'han', 'HanXRQChr10g0297961' => 'han', 'HanXRQChr11g0326231' => 'han', 'HanXRQChr11g0328471' => 'han', 'HanXRQChr16g0507941' => 'han', 'HanXRQChr17g0560211' => 'han', 'Haze_02108' => 'cav', 'Haze_02428' => 'cav', 'Haze_05593' => 'cav', 'Haze_06448' => 'cav', 'Haze_09427' => 'cav', 'Haze_12022' => 'cav', 'Haze_17612' => 'cav', 'Haze_17928' => 'cav', 'Hma1.2p1_0032F.1_g019250' => 'hma', 'Hma1.2p1_0163F.1_g072690' => 'hma', 'Hma1.2p1_0265F.1_g106710' => 'hma', 'Hma1.2p1_0286F.1_g113970' => 'hma', 'Hma1.2p1_0363F.1_g136640' => 'hma', 'Hma1.2p1_0584F.1_g183470' => 'hma', 'Hma1.2p1_0885F.1_g232570' => 'hma', 'HPP92_006022' => 'vpl', 'HPP92_007320' => 'vpl', 'HPP92_011521' => 'vpl', 'HPP92_019387' => 'vpl', 'HPP92_024038' => 'vpl', 'Hund05891' => 'sun', 'Hund06450' => 'sun', 'Hund12053' => 'sun', 'Hund16800' => 'sun', 'Hund21222' => 'sun', 'Hund22896' => 'sun', 'Hund23746' => 'sun', 'Hund27083' => 'sun', 'Lalb_Chr02g0141831' => 'lal', 'Lalb_Chr02g0141841' => 'lal', 'Lalb_Chr05g0220411' => 'lal', 'Lalb_Chr06g0162081' => 'lal', 'Lalb_Chr09g0327651' => 'lal', 'Lalb_Chr13g0295051' => 'lal', 'Lalb_Chr15g0086801' => 'lal', 'Lalb_Chr16g0383781' => 'lal', 'Lalb_Chr16g0383791' => 'lal', 'Lalb_Chr18g0055441' => 'lal', 'Lalb_Chr18g0059611' => 'lal', 'Lalb_Chr20g0109661' => 'lal', 'Lalb_Chr20g0109831' => 'lal', 'Lalb_Chr20g0121871' => 'lal', 'Lalb_Chr22g0355361' => 'lal', 'Lalb_Chr25g0286371' => 'lal', 'Lj1A1187G43' => 'lonja', 'Lj1A1205T50' => 'lonja', 'Lj1A800G33' => 'lonja', 'Lj1C1187T7' => 'lonja', 'Lj1C843T11' => 'lonja', 'Lj1g0010940' => 'lja', 'Lj2A288T69' => 'lonja', 'Lj3g0024276' => 'lja', 'Lj4A47T76' => 'lonja', 'Lj4g0005805' => 'lja', 'Lj4g0006097' => 'lja', 'Lj4g0008528' => 'lja', 'Lj4g0024907' => 'lja', 'Lj5g0012472' => 'lja', 'Lj5g0018648' => 'lja', 'Lj6C789G1' => 'lonja', 'Lj6g0004000' => 'lja', 'Lj7A292G67' => 'lonja', 'Lj7A292T64' => 'lonja', 'Lj9A400T58' => 'lonja', 'Lsat_1_v5_gn_1_126181' => 'lsa', 'Lsat_1_v5_gn_4_123041' => 'lsa', 'Lsat_1_v5_gn_4_133620' => 'lsa', 'Lsat_1_v5_gn_4_53221' => 'lsa', 'Lsat_1_v5_gn_4_71961' => 'lsa', 'Lsat_1_v5_gn_7_105241' => 'lsa', 'Lsat_1_v5_gn_7_21361' => 'lsa', 'Lsat_1_v5_gn_7_28860' => 'lsa', 'Lsat_1_v5_gn_7_31260' => 'lsa', 'Lsat_1_v5_gn_8_52801' => 'lsa', 'Manes.02G191400' => 'mes', 'Manes.03G110100' => 'mes', 'Manes.04G071100' => 'mes', 'Manes.05G100500' => 'mes', 'Manes.05G164700' => 'mes', 'Manes.15G087000' => 'mes', 'Manes.15G121500' => 'mes', 'Manes.16G028300' => 'mes', 'Manes.17G046100' => 'mes', 'Manes.17G069800' => 'mes', 'Manes.18G100500' => 'mes', 'Mapoly0002s0109' => 'mpo', 'Mapoly0024s0007' => 'mpo', 'Mapoly0089s0032' => 'mpo', 'MBI04_g42241_MAGBIO' => 'mbi', 'MBI05_g11988_MAGBIO' => 'mbi', 'MBI05_g35452_MAGBIO' => 'mbi', 'MBI07_g30179_MAGBIO' => 'mbi', 'MBI07_g35859_MAGBIO' => 'mbi', 'MBI07_g35860_MAGBIO' => 'mbi', 'MBI07_g37166_MAGBIO' => 'mbi', 'MBI08_g18172_MAGBIO' => 'mbi', 'MBI09_g08441_MAGBIO' => 'mbi', 'MBI13_g01676_MAGBIO' => 'mbi', 'MBI14_g42955_MAGBIO' => 'mbi', 'MBI16_g13161_MAGBIO' => 'mbi', 'MBI17_g27204_MAGBIO' => 'mbi', 'MBI19_g21595_MAGBIO' => 'mbi', 'MD00G1148400' => 'mdo', 'MD02G1301200' => 'mdo', 'MD03G1227800' => 'mdo', 'MD05G1041100' => 'mdo', 'MD05G1124800' => 'mdo', 'MD05G1284000' => 'mdo', 'MD05G1338800' => 'mdo', 'MD05G1338900' => 'mdo', 'MD07G1022800' => 'mdo', 'MD10G1047500' => 'mdo', 'MD10G1127500' => 'mdo', 'MD10G1262300' => 'mdo', 'MD10G1293800' => 'mdo', 'MD16G1074300' => 'mdo', 'Medtr1g021670' => 'mtr', 'Medtr1g096320' => 'mtr', 'Medtr2g013690' => 'mtr', 'Medtr2g019450' => 'mtr', 'Medtr2g085170' => 'mtr', 'Medtr4g088785' => 'mtr', 'Medtr8g055930' => 'mtr', 'Medtr8g085850' => 'mtr', 'MELO3C002605.2' => 'cme', 'MELO3C003891.2' => 'cme', 'MELO3C004012.2' => 'cme', 'MELO3C007134.2' => 'cme', 'MELO3C008118.2' => 'cme', 'MELO3C016700.2' => 'cme', 'MELO3C024127.2' => 'cme', 'MELO3C033361.2' => 'cme', 'MELO3C033362.2' => 'cme', 'Migut.C00430' => 'egut', 'Migut.C01246' => 'egut', 'Migut.E00101' => 'egut', 'Migut.H01486' => 'egut', 'Migut.H01939' => 'egut', 'Migut.K00360' => 'egut', 'Migut.M00910' => 'egut', 'Migut.M01139' => 'egut', 'Migut.N02677' => 'egut', 'MSTRG.13252' => 'ama', 'MSTRG.14701' => 'ama', 'MSTRG.1521' => 'ama', 'MSTRG.15884' => 'ama', 'MSTRG.16242' => 'ama', 'MSTRG.22285' => 'ama', 'MSTRG.22444' => 'ama', 'MSTRG.2349' => 'ama', 'MSTRG.26308' => 'ama', 'MSTRG.28296' => 'ama', 'MSTRG.9895' => 'ama', 'Nitab4.5_0000110g0060' => 'nta', 'Nitab4.5_0000420g0130' => 'nta', 'Nitab4.5_0000422g0030' => 'nta', 'Nitab4.5_0000560g0180' => 'nta', 'Nitab4.5_0000703g0100' => 'nta', 'Nitab4.5_0000786g0200' => 'nta', 'Nitab4.5_0001336g0020' => 'nta', 'Nitab4.5_0001796g0030' => 'nta', 'Nitab4.5_0003348g0060' => 'nta', 'Nitab4.5_0003698g0040' => 'nta', 'Nitab4.5_0003942g0090' => 'nta', 'Nitab4.5_0004775g0070' => 'nta', 'Nitab4.5_0004864g0030' => 'nta', 'Nitab4.5_0005615g0020' => 'nta', 'Nitab4.5_0009288g0030' => 'nta', 'Nitab4.5_0009341g0010' => 'nta', 'Nitab4.5_0009535g0010' => 'nta', 'Nn1g03995' => 'nnu', 'Nn1g04100' => 'nnu', 'Nn1g06530' => 'nnu', 'Nn3g16404' => 'nnu', 'Nn3g17212' => 'nnu', 'Nn3g20776' => 'nnu', 'Nn3g21923' => 'nnu', 'Nn5g27737' => 'nnu', 'Nn5g29461' => 'nnu', 'Nn7g38355' => 'nnu', 'Nn8g39873' => 'nnu', 'Oeu000548.2' => 'oeu', 'Oeu004672.1' => 'oeu', 'Oeu015605.2' => 'oeu', 'Oeu016092.1' => 'oeu', 'Oeu017879.3' => 'oeu', 'Oeu024910.1' => 'oeu', 'Oeu028965.1' => 'oeu', 'Oeu031269.1' => 'oeu', 'Oeu031270.1' => 'oeu', 'Oeu032535.1' => 'oeu', 'Oeu034151.1' => 'oeu', 'Oeu034152.1' => 'oeu', 'Oeu034588.2' => 'oeu', 'Oeu050846.1' => 'oeu', 'Oeu050849.2' => 'oeu', 'Oeu051063.2' => 'oeu', 'Oeu052368.1' => 'oeu', 'Oeu052370.1' => 'oeu', 'Os01g0210400' => 'osa', 'Os01g0304300' => 'osa', 'Os01g0749100' => 'osa', 'Os02g0745800' => 'osa', 'Os03g0769050' => 'osa', 'Os05g0531500' => 'osa', 'Os06g0724300' => 'osa', 'Os11g0198100' => 'osa', 'Peaxi162Scf00069g01425' => 'pax', 'Peaxi162Scf00280g00811' => 'pax', 'Peaxi162Scf00310g00615' => 'pax', 'Peaxi162Scf00362g00542' => 'pax', 'Peaxi162Scf00461g00310' => 'pax', 'Peaxi162Scf00530g00118' => 'pax', 'Peaxi162Scf00541g00057' => 'pax', 'Peaxi162Scf00661g00017' => 'pax', 'Peaxi162Scf00926g00027' => 'pax', 'Peaxi162Scf01064g00263' => 'pax', 'Peaxi162Scf01211g00135' => 'pax', 'PGR004G2336' => 'pgr', 'PGR042G0327' => 'pgr', 'PGR042G1957' => 'pgr', 'PGR042G2003' => 'pgr', 'PGR042G3929' => 'pgr', 'PGR083G1137' => 'pgr', 'PGR083G1364' => 'pgr', 'PGSC0003DMG400003381' => 'stu', 'PGSC0003DMG400003417' => 'stu', 'PGSC0003DMG400008981' => 'stu', 'PGSC0003DMG400012417' => 'stu', 'PGSC0003DMG400012823' => 'stu', 'PGSC0003DMG400016885' => 'stu', 'PGSC0003DMG400022812' => 'stu', 'PGSC0003DMG400029726' => 'stu', 'PGSC0003DMG401009243' => 'stu', 'PGSC0003DMG401031505' => 'stu', 'PGSC0003DMG402031505' => 'stu', 'Phvul.001G017600' => 'pvu', 'Phvul.002G193500' => 'pvu', 'Phvul.002G228900' => 'pvu', 'Phvul.002G236800' => 'pvu', 'Phvul.003G049500' => 'pvu', 'Phvul.005G072000' => 'pvu', 'Phvul.006G164800' => 'pvu', 'Phvul.006G185100' => 'pvu', 'Phvul.007G090000' => 'pvu', 'Potri.001G399800' => 'ptr', 'Potri.002G149900' => 'ptr', 'Potri.004G044100' => 'ptr', 'Potri.004G177600' => 'ptr', 'Potri.009G138000' => 'ptr', 'Potri.010G094000' => 'ptr', 'Potri.011G053000' => 'ptr', 'Potri.011G119300' => 'ptr', 'Potri.013G113700' => 'ptr', 'Potri.018G107800' => 'ptr', 'Potri.019G084100' => 'ptr', 'Pp3c14_23720' => 'ppa', 'Pp3c16_6340' => 'ppa', 'Pp3c23_13420' => 'ppa', 'Pp3c24_2740' => 'ppa', 'Pp3c25_860' => 'ppa', 'Pp3c8_21750' => 'ppa', 'Prupe.1G273000' => 'ppe', 'Prupe.1G273700' => 'ppe', 'Prupe.1G274100' => 'ppe', 'Prupe.2G023300' => 'ppe', 'Prupe.4G048000' => 'ppe', 'Prupe.4G080400' => 'ppe', 'Prupe.4G181200' => 'ppe', 'Prupe.8G056900' => 'ppe', 'Prupe.8G168700' => 'ppe', 'Psat1g189080' => 'psa', 'Psat1g204760' => 'psa', 'Psat4g175560' => 'psa', 'Psat4g177720' => 'psa', 'Psat5g244240' => 'psa', 'Psat6g010720' => 'psa', 'Psat6g187200' => 'psa', 'Psat7g072040' => 'psa', 'PSO017G3501' => 'pso', 'PSO063G2148' => 'pso', 'PSO063G5608' => 'pso', 'PSO210G6392' => 'pso', 'PSO541G2319' => 'pso', 'PSO541G2836' => 'pso', 'PSO541G4012' => 'pso', 'PSO541G6253' => 'pso', 'PSO675G0580' => 'pso', 'PSO675G0856' => 'pso', 'PSO675G5635' => 'pso', 'PSO675G9157' => 'pso', 'PSO832G1660' => 'pso', 'PSO832G1969' => 'pso', 'QL02p007186' => 'qlo', 'QL02p033904' => 'qlo', 'QL03p064391' => 'qlo', 'QL05p040593' => 'qlo', 'QL05p058242' => 'qlo', 'QL08p021825' => 'qlo', 'QL11p004981' => 'qlo', 'RcHm_v2.0_Chr1g0318301' => 'rch', 'RcHm_v2.0_Chr4g0418501' => 'rch', 'RcHm_v2.0_Chr4g0439971' => 'rch', 'RcHm_v2.0_Chr5g0008541' => 'rch', 'RcHm_v2.0_Chr5g0014101' => 'rch', 'RcHm_v2.0_Chr5g0014131' => 'rch', 'RcHm_v2.0_Chr5g0033621' => 'rch', 'RcHm_v2.0_Chr6g0272041' => 'rch', 'RcHm_v2.0_Chr6g0278831' => 'rch', 'Rhsim02G0130400' => 'rsi', 'Rhsim02G0171100' => 'rsi', 'Rhsim05G0053000' => 'rsi', 'Rhsim05G0053100' => 'rsi', 'Rhsim06G0096500' => 'rsi', 'Rhsim06G0096600' => 'rsi', 'Rhsim06G0199100' => 'rsi', 'Rhsim12G0062300' => 'rsi', 'Rhsim12G0062800' => 'rsi', 'Sabra02G0118600' => 'sbr', 'Sabra04G0027300' => 'sbr', 'Sabra04G0119500' => 'sbr', 'Sabra08G0112500' => 'sbr', 'Sabra11G0036800' => 'sbr', 'Sabra11G0103800' => 'sbr', 'Sabra13G0096300' => 'sbr', 'Sabra16G0262300' => 'sbr', 'Sabra18G0091700' => 'sbr', 'Sabra19G0095400' => 'sbr', 'SalBow6G3080' => 'sbo', 'SalBow7G1157' => 'sbo', 'SalBow7G2123' => 'sbo', 'SalBow7G2285' => 'sbo', 'SalBow7G3537' => 'sbo', 'SalBow8G2947' => 'sbo', 'SalBow8G4463' => 'sbo', 'SalBow8G5466' => 'sbo', 'Sc01g0001750' => 'sci', 'Sc02g0006640' => 'sci', 'Sc02g0006670' => 'sci', 'Sc04g0008220' => 'sci', 'Sc05g0006190' => 'sci', 'Sc08g0002760' => 'sci', 'Sc17g0006170' => 'sci', 'Sc22g0002050' => 'sci', 'Sc23g0001190' => 'sci', 'Sc24g0000980' => 'sci', 'Sed0006245' => 'sed', 'Sed0007543' => 'sed', 'Sed0009411' => 'sed', 'Sed0010765' => 'sed', 'Sed0012944' => 'sed', 'Sed0014682' => 'sed', 'Sed0016174' => 'sed', 'Sed0016796' => 'sed', 'Sed0020317' => 'sed', 'Sed0021467' => 'sed', 'SEGI_01316' => 'sgi', 'SEGI_03374' => 'sgi', 'SEGI_16265' => 'sgi', 'SEGI_18569' => 'sgi', 'SEGI_20351' => 'sgi', 'SEGI_26395' => 'sgi', 'SEGI_29469' => 'sgi', 'SEGI_34771' => 'sgi', 'SEGI_36769' => 'sgi', 'SEGI_37139' => 'sgi', 'SGA_v2.0_scaffold100G29687' => 'sas', 'SGA_v2.0_scaffold118G32472' => 'sas', 'SGA_v2.0_scaffold14G07051' => 'sas', 'SGA_v2.0_scaffold183G39845' => 'sas', 'SGA_v2.0_scaffold1G00174' => 'sas', 'SGA_v2.0_scaffold22G09714' => 'sas', 'SGA_v2.0_scaffold333G48992' => 'sas', 'SGA_v2.0_scaffold46G17491' => 'sas', 'SGA_v2.0_scaffold49G18294' => 'sas', 'SGA_v2.0_scaffold63G21658' => 'sas', 'SHI01741' => 'shi', 'SHI05771' => 'shi', 'SHI18077' => 'shi', 'SHI20525' => 'shi', 'SHI20527' => 'shi', 'SHI20528' => 'shi', 'SMO172G0185' => 'smo', 'SMO198G0020' => 'smo', 'SMO351G0006' => 'smo', 'SMO356G0118' => 'smo', 'SMO358G0296' => 'smo', 'SMO367G0079' => 'smo', 'SMO367G1277' => 'smo', 'Solyc01g014220.3' => 'sly', 'Solyc01g111770.2' => 'sly', 'Solyc02g078180.3' => 'sly', 'Solyc03g006430.3' => 'sly', 'Solyc03g006456.1' => 'sly', 'Solyc03g079860.2' => 'sly', 'Solyc04g079770.3' => 'sly', 'Solyc05g007430.4' => 'sly', 'Solyc07g063150.3' => 'sly', 'Solyc08g016620.3' => 'sly', 'Solyc09g057590.3' => 'sly', 'Solyc09g057600.1' => 'sly', 'Solyc10g009050.3' => 'sly', 'Solyc11g017420.2' => 'sly', 'Sopen01g053810' => 'spe', 'Sopen02g023040' => 'spe', 'Sopen03g002440' => 'spe', 'Sopen04g033350' => 'spe', 'Sopen05g003310' => 'spe', 'Sopen07g004050' => 'spe', 'Sopen07g031340' => 'spe', 'Sopen08g006990' => 'spe', 'Sopen10g004830' => 'spe', 'Sopen11g009370' => 'spe', 'Sp1g24450' => 'spa', 'Sp1g29670' => 'spa', 'Sp1g39600' => 'spa', 'Sp2g11080' => 'spa', 'Sp2g13970' => 'spa', 'Sp4g16130' => 'spa', 'Sp6g13080' => 'spa', 'Sp7g37270' => 'spa', 'TAR371G0065' => 'tar', 'TAR376G0340' => 'tar', 'TAR376G0435' => 'tar', 'TAR381G0002' => 'tar', 'TAR381G1236' => 'tar', 'TAR624G0055' => 'tar', 'TAR624G0324' => 'tar', 'TAR624G0696' => 'tar', 'TAR624G0906' => 'tar', 'TAR625G0107' => 'tar', 'TAR626G0015' => 'tar', 'TAR626G1356' => 'tar', 'TAR627G0888' => 'tar', 'TAR628G0399' => 'tar', 'TAR628G1327' => 'tar', 'TAR629G2831' => 'tar', 'TAR629G2874' => 'tar', 'TAR633G1432' => 'tar', 'TAR633G2771' => 'tar', 'THA.LOC104803394' => 'tha', 'THA.LOC104805153' => 'tha', 'THA.LOC104806784' => 'tha', 'THA.LOC104810473' => 'tha', 'THA.LOC104813100' => 'tha', 'THA.LOC104814215' => 'tha', 'THA.LOC104815554' => 'tha', 'THA.LOC104820544' => 'tha', 'THA.LOC104824754' => 'tha', 'THA.LOC104827717' => 'tha', 'Thecc.02G031400' => 'tca', 'Thecc.02G055900' => 'tca', 'Thecc.02G350800' => 'tca', 'Thecc.06G150900' => 'tca', 'Thecc.06G186600' => 'tca', 'Thecc.07G089600' => 'tca', 'Thecc.08G020400' => 'tca', 'Thecc.08G182100' => 'tca', 'Thhalv10000873m.g' => 'esa', 'Thhalv10004185m.g' => 'esa', 'Thhalv10006981m.g' => 'esa', 'Thhalv10007204m.g' => 'esa', 'Thhalv10011374m.g' => 'esa', 'Thhalv10013482m.g' => 'esa', 'Thhalv10017801m.g' => 'esa', 'Thhalv10024983m.g' => 'esa', 'TPR.G12072' => 'tpr', 'TPR.G15769' => 'tpr', 'TPR.G16504' => 'tpr', 'TPR.G16506' => 'tpr', 'TPR.G24345' => 'tpr', 'TPR.G26666' => 'tpr', 'TPR.G27320' => 'tpr', 'TPR.G31819' => 'tpr', 'TPR.G38879' => 'tpr', 'TPR.G39015' => 'tpr', 'TPR.G8819' => 'tpr', 'TWI09G0924' => 'twi', 'TWI12G0811' => 'twi', 'TWI12G1294' => 'twi', 'TWI31G0150' => 'twi', 'TWI36G1262' => 'twi', 'TWI38G1287' => 'twi', 'TWI38G1633' => 'twi', 'TWI38G1982' => 'twi', 'TWI39G0116' => 'twi', 'TWI60G1011' => 'twi', 'TWI63G0171' => 'twi', 'TWI73G0839' => 'twi', 'TWI79G1511' => 'twi', 'unitig_0.g915' => 'ugi', 'unitig_0.g916' => 'ugi', 'unitig_21.g20219' => 'ugi', 'unitig_21.g20416' => 'ugi', 'unitig_578.g16132' => 'ugi', 'unitig_578.g16718' => 'ugi', 'unitig_62.g23481' => 'ugi', 'unitig_744.g24535' => 'ugi', 'unitig_749.g13525' => 'ugi', 'vmacro01248' => 'vma', 'vmacro02290' => 'vma', 'vmacro10946' => 'vma', 'vmacro11865' => 'vma', 'vmacro12493' => 'vma', 'vmacro17322' => 'vma', 'vmacro21599' => 'vma', 'vmacro23041' => 'vma', 'VMungo0251G0004' => 'vmu', 'VMungo0251G2639' => 'vmu', 'VMungo0251G2967' => 'vmu', 'VMungo0540G0864' => 'vmu', 'VMungo0540G1569' => 'vmu', 'VMungo0647G0317' => 'vmu', 'VMungo0720G1373' => 'vmu', 'VMungo0720G1508' => 'vmu', 'VMungo1080G0485' => 'vmu', 'VMungo1215G3177' => 'vmu', 'Zm00001eb112600' => 'zma', 'Zm00001eb120220' => 'zma', 'Zm00001eb153240' => 'zma', 'Zm00001eb168880' => 'zma', 'Zm00001eb213920' => 'zma', 'Zm00001eb228280' => 'zma', 'Zm00001eb254580' => 'zma', 'Zm00001eb272180' => 'zma', 'Zm00001eb293190' => 'zma', 'Zm00001eb322930' => 'zma', 'Zm00001eb353360' => 'zma', 'Zm00001eb353390' => 'zma', 'Zm00001eb353430' => 'zma', 'Zm00001eb353440' => 'zma', 'Zm00001eb353780' => 'zma' ) $gf_id = 'HOM05D000499' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000499' ) $data_identifier = 'HOM05D000499' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 29, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 12, 'amhyb' => (int) 8, 'aly' => (int) 12, 'aox' => (int) 9, 'arhy' => (int) 26, 'ath' => (int) 8, 'atr' => (int) 7, 'acertr' => (int) 10, 'cqu' => (int) 15, 'bca' => (int) 29, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 11, 'cansat' => (int) 8, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 9, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 8, 'cpa' => (int) 10, 'csa' => (int) 7, 'camsi' => (int) 20, 'dca' => (int) 8, 'din' => (int) 12, 'dzi' => (int) 14, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 6, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 38, 'gra' => (int) 16, 'vvi' => (int) 8, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 5, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 11, 'lja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 11, 'mpo' => (int) 3, 'mbi' => (int) 14, 'mdo' => (int) 14, 'mtr' => (int) 8, 'cme' => (int) 9, 'egut' => (int) 9, 'ama' => (int) 11, 'nta' => (int) 17, 'nnu' => (int) 11, 'oeu' => (int) 18, 'osa' => (int) 8, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 6, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 9, 'rsi' => (int) 9, 'sbr' => (int) 10, 'sbo' => (int) 8, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 10, 'sas' => (int) 10, 'shi' => (int) 6, 'smo' => (int) 7, 'sly' => (int) 14, 'spe' => (int) 10, 'spa' => (int) 8, 'tar' => (int) 19, 'tha' => (int) 10, 'tca' => (int) 8, 'esa' => (int) 8, 'tpr' => (int) 11, 'twi' => (int) 13, 'ugi' => (int) 9, 'vma' => (int) 8, 'vmu' => (int) 10, 'zma' => (int) 15 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb353780' $species_info = array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ) $local_species = 'mdo' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000499', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1066', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p29780' => 'bna', 'A02p33180' => 'bna', 'A03p16470' => 'bna', 'A03p66010' => 'bna', 'A04p25970' => 'bna', 'A06p01270' => 'bna', 'A06p46080' => 'bna', 'A07p11400' => 'bna', 'A08p01840' => 'bna', 'A08p08230' => 'bna', 'A08p25740' => 'bna', 'A09p32070' => 'bna', 'A09p37830' => 'bna', 'A09p42840' => 'bna', 'A09p42850' => 'bna', 'Aa31LG10G2060' => 'aar', 'Aa31LG2G7410' => 'aar', 'Aa31LG6G10200' => 'aar', 'Aa31LG6G16680' => 'aar', 'Aa31LG6G8470' => 'aar', 'Aa31LG9G12730' => 'aar', 'Aa31LG9G13680' => 'aar', 'Aa31LG9G14920' => 'aar', 'Aa31LG9G6650' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4977' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5467' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3254' => 'aag', 'Actinidia02578' => 'ach', 'Actinidia07693' => 'ach', 'Actinidia08413' => 'ach', 'Actinidia08414' => 'ach', 'Actinidia15289' => 'ach', 'Actinidia19871' => 'ach', 'Actinidia21475' => 'ach', 'Actinidia22576' => 'ach', 'Actinidia28327' => 'ach', 'Actinidia32491' => 'ach', 'Actinidia39463' => 'ach', 'Actinidia39571' => 'ach', 'Ah.01g013750' => 'amhyb', 'Ah.01g023210' => 'amhyb', 'Ah.04g164850' => 'amhyb', 'Ah.05g178060' => 'amhyb', 'Ah.07g204270' => 'amhyb', 'Ah.07g208480' => 'amhyb', 'Ah.09g237410' => 'amhyb', 'Ah.14g089460' => 'amhyb', 'AL1G41790' => 'aly', 'AL1G49050' => 'aly', 'AL1G53810' => 'aly', 'AL1G61400' => 'aly', 'AL4G18580' => 'aly', 'AL5G12510' => 'aly', 'AL5G12540' => 'aly', 'AL6G43230' => 'aly', 'AL7G10370' => 'aly', 'AL7G19250' => 'aly', 'AL8G12240' => 'aly', 'AL8G18540' => 'aly', 'Aqoxy1G02409' => 'aox', 'Aqoxy2G03993' => 'aox', 'Aqoxy3G03357' => 'aox', 'Aqoxy4G00785' => 'aox', 'Aqoxy5G02598' => 'aox', 'Aqoxy6G00132' => 'aox', 'Aqoxy7G01776' => 'aox', 'Aqoxy7G02316' => 'aox', 'Aqoxy7G03973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.12AFKW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B8730' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27IQR1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3F75VG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3RE0GA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41TCQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.527VTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FIR39' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5W8UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DA38EV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ63HS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H1I32C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HC27T5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4M8AP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7N3CZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9UVDZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LS1NQA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT1D4B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SKC4TM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCFV76' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF9Q1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQWD9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1ZM88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WE07RT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YCK7VH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJE6Q6' => 'arhy', 'AT1G28240' => 'ath', 'AT1G34550' => 'ath', 'AT1G53040' => 'ath', 'AT2G02910' => 'ath', 'AT4G09630' => 'ath', 'AT4G38500' => 'ath', 'AT5G42660' => 'ath', 'AT5G46220' => 'ath', 'ATR0152G026' => 'atr', 'ATR0564G343' => 'atr', 'ATR0706G151' => 'atr', 'ATR0733G207' => 'atr', 'ATR0751G234' => 'atr', 'ATR0807G048' => 'atr', 'ATR1091G084' => 'atr', 'Atru.chr10.1229' => 'acertr', 'Atru.chr10.1230' => 'acertr', 'Atru.chr10.1874' => 'acertr', 'Atru.chr11.1808' => 'acertr', 'Atru.chr13.1795' => 'acertr', 'Atru.chr13.570' => 'acertr', 'Atru.chr2.2608' => 'acertr', 'Atru.chr2.2609' => 'acertr', 'Atru.chr5.3428' => 'acertr', 'Atru.chr8.1171' => 'acertr', 'AUR62004651' => 'cqu', 'AUR62008675' => 'cqu', 'AUR62010014' => 'cqu', 'AUR62013004' => 'cqu', 'AUR62014825' => 'cqu', 'AUR62015015' => 'cqu', 'AUR62015151' => 'cqu', 'AUR62017020' => 'cqu', 'AUR62019422' => 'cqu', 'AUR62023570' => 'cqu', 'AUR62025571' => 'cqu', 'AUR62029098' => 'cqu', 'AUR62033863' => 'cqu', 'AUR62034296' => 'cqu', 'AUR62040075' => 'cqu', 'BcaB02g07334' => 'bca', 'BcaB02g10575' => 'bca', 'BcaB03g12119' => 'bca', 'BcaB03g12120' => 'bca', 'BcaB03g13945' => 'bca', 'BcaB04g17123' => 'bca', 'BcaB04g17867' => 'bca', 'BcaB04g19839' => 'bca', 'BcaB07g30317' => 'bca', 'BcaB07g32432' => 'bca', 'BcaB07g33362' => 'bca', 'BcaB08g36611' => 'bca', 'BcaC01g00028' => 'bca', 'BcaC01g01356' => 'bca', 'BcaC01g02034' => 'bca', 'BcaC01g06051' => 'bca', 'BcaC03g16839' => 'bca', 'BcaC03g17176' => 'bca', 'BcaC05g26829' => 'bca', 'BcaC06g31490' => 'bca', 'BcaC06g35344' => 'bca', 'BcaC06g36570' => 'bca', 'BcaC07g37537' => 'bca', 'BcaC08g43491' => 'bca', 'BcaC08g43773' => 'bca', 'BcaNung00234' => 'bca', 'BcaNung01982' => 'bca', 'BcaNung03707' => 'bca', 'BcaNung06454' => 'bca', 'BolC2t10762H' => 'bol', 'BolC2t11191H' => 'bol', 'BolC3t14322H' => 'bol', 'BolC3t19747H' => 'bol', 'BolC3t21425H' => 'bol', 'BolC4t27800H' => 'bol', 'BolC5t31423H' => 'bol', 'BolC6t35951H' => 'bol', 'BolC6t36282H' => 'bol', 'BolC7t40678H' => 'bol', 'BolC7t40679H' => 'bol', 'BolC7t42222H' => 'bol', 'BolC7t43492H' => 'bol', 'BolC7t46785H' => 'bol', 'BolC8t47853H' => 'bol', 'BolC9t56805H' => 'bol', 'BraA02t08000Z' => 'bra', 'BraA02t08341Z' => 'bra', 'BraA03t10936Z' => 'bra', 'BraA03t15657Z' => 'bra', 'BraA04t18100Z' => 'bra', 'BraA05t20523Z' => 'bra', 'BraA06t23353Z' => 'bra', 'BraA06t27473Z' => 'bra', 'BraA06t27769Z' => 'bra', 'BraA07t28928Z' => 'bra', 'BraA08t32236Z' => 'bra', 'BraA08t32841Z' => 'bra', 'BraA08t34524Z' => 'bra', 'BraA09t38742Z' => 'bra', 'BraA09t39295Z' => 'bra', 'C02p47180' => 'bna', 'C02p50990' => 'bna', 'C03p19360' => 'bna', 'C03p74950' => 'bna', 'C03p91000' => 'bna', 'C04p63260' => 'bna', 'C05p27050' => 'bna', 'C06p08750' => 'bna', 'C06p11490' => 'bna', 'C07p02820' => 'bna', 'C07p17180' => 'bna', 'C07p29440' => 'bna', 'C07p63730' => 'bna', 'C09p39260' => 'bna', 'CAN.G1164.34' => 'can', 'CAN.G1164.39' => 'can', 'CAN.G1530.3' => 'can', 'CAN.G162.61' => 'can', 'CAN.G176.6' => 'can', 'CAN.G289.49' => 'can', 'CAN.G370.21' => 'can', 'CAN.G370.22' => 'can', 'CAN.G371.117' => 'can', 'CAN.G58.37' => 'can', 'CAN.G588.98' => 'can', 'CANSAT21G2266' => 'cansat', 'CANSAT25G2799' => 'cansat', 'CANSAT35G0862' => 'cansat', 'CANSAT35G1704' => 'cansat', 'CANSAT35G1760' => 'cansat', 'CANSAT56G3971' => 'cansat', 'CANSAT56G4116' => 'cansat', 'CANSAT80G1259' => 'cansat', 'CARHR027730' => 'chi', 'CARHR033880' => 'chi', 'CARHR043270' => 'chi', 'CARHR145330' => 'chi', 'CARHR145340' => 'chi', 'CARHR175570' => 'chi', 'CARHR181570' => 'chi', 'CARHR258470' => 'chi', 'CARHR260490' => 'chi', 'CARHR294220' => 'chi', 'Carub.0001s2668' => 'cru', 'Carub.0001s3257' => 'cru', 'Carub.0001s4220' => 'cru', 'Carub.0005s0179' => 'cru', 'Carub.0006s2807' => 'cru', 'Carub.0007s0039' => 'cru', 'Carub.0008s0169' => 'cru', 'Carub.0008s0636' => 'cru', 'Ca_00338_v3' => 'car', 'Ca_00542_v3' => 'car', 'Ca_01844_v3' => 'car', 'Ca_10611_v3' => 'car', 'Ca_13326_v3' => 'car', 'Ca_17944_v3' => 'car', 'Ca_18546_v3' => 'car', 'Ca_24219_v3' => 'car', 'Ca_29972_v3' => 'car', 'CBR_g3681' => 'cbr', 'CBR_g40021' => 'cbr', 'Cc01_g08140' => 'ccan', 'Cc02_g13410' => 'ccan', 'Cc02_g37480' => 'ccan', 'Cc05_g12030' => 'ccan', 'Cc09_g03370' => 'ccan', 'Cc09_g10300' => 'ccan', 'Cc10_g03530' => 'ccan', 'Cc10_g11380' => 'ccan', 'CDE01G0176' => 'cde', 'CDE02G0675' => 'cde', 'CDE02G0942' => 'cde', 'CDE02G1153' => 'cde', 'CDE02G4177' => 'cde', 'CDE04G2117' => 'cde', 'CDE04G2736' => 'cde', 'CDE08G1161' => 'cde', 'CDE09G1238' => 'cde', 'Cfa000467' => 'cfa', 'Cfa000947' => 'cfa', 'Cfa004969' => 'cfa', 'Cfa005284' => 'cfa', 'Cfa008993' => 'cfa', 'Cfa018187' => 'cfa', 'Cfa018454' => 'cfa', 'Cfa020585' => 'cfa', 'Ciclev10000424m.g' => 'ccl', 'Ciclev10003605m.g' => 'ccl', 'Ciclev10007828m.g' => 'ccl', 'Ciclev10014620m.g' => 'ccl', 'Ciclev10015169m.g' => 'ccl', 'Ciclev10018291m.g' => 'ccl', 'Ciclev10028256m.g' => 'ccl', 'Ciclev10033822m.g' => 'ccl', 'CiPaw.05G060300' => 'cil', 'CiPaw.05G085000' => 'cil', 'CiPaw.06G083700' => 'cil', 'CiPaw.06G120300' => 'cil', 'CiPaw.09G060500' => 'cil', 'CiPaw.09G123800' => 'cil', 'CiPaw.11G169700' => 'cil', 'CiPaw.12G118300' => 'cil', 'CiPaw.15G071000' => 'cil', 'CiPaw.15G081900' => 'cil', 'ClCG01G024610' => 'cla', 'ClCG03G006070' => 'cla', 'ClCG05G019250' => 'cla', 'ClCG09G009500' => 'cla', 'ClCG11G008200' => 'cla', 'ClCG11G018080' => 'cla', 'COL.COLO4_17373' => 'col', 'COL.COLO4_22994' => 'col', 'COL.COLO4_26389' => 'col', 'COL.COLO4_27170' => 'col', 'COL.COLO4_31074' => 'col', 'COL.COLO4_31465' => 'col', 'COL.COLO4_36438' => 'col', 'COL.COLO4_36439' => 'col', 'Cpa.g.c38781' => 'cpa', 'Cpa.g.sc128.12' => 'cpa', 'Cpa.g.sc166.7' => 'cpa', 'Cpa.g.sc166.8' => 'cpa', 'Cpa.g.sc20.111' => 'cpa', 'Cpa.g.sc27.31' => 'cpa', 'Cpa.g.sc64.36' => 'cpa', 'Cpa.g.sc64.37' => 'cpa', 'Cpa.g.sc66.49' => 'cpa', 'Cpa.g.sc80.64' => 'cpa', 'CsaV3_1G012320' => 'csa', 'CsaV3_2G008480' => 'csa', 'CsaV3_2G033450' => 'csa', 'CsaV3_3G044830' => 'csa', 'CsaV3_4G033710' => 'csa', 'CsaV3_6G051730' => 'csa', 'CsaV3_7G025350' => 'csa', 'CSS0001067' => 'camsi', 'CSS0005996' => 'camsi', 'CSS0006590' => 'camsi', 'CSS0009673' => 'camsi', 'CSS0010201' => 'camsi', 'CSS0010549' => 'camsi', 'CSS0011364' => 'camsi', 'CSS0014473' => 'camsi', 'CSS0014961' => 'camsi', 'CSS0020191' => 'camsi', 'CSS0021165' => 'camsi', 'CSS0022306' => 'camsi', 'CSS0030591' => 'camsi', 'CSS0030696' => 'camsi', 'CSS0032653' => 'camsi', 'CSS0037487' => 'camsi', 'CSS0041102' => 'camsi', 'CSS0041261' => 'camsi', 'CSS0046246' => 'camsi', 'CSS0049256' => 'camsi', 'DCAR_004075' => 'dca', 'DCAR_011538' => 'dca', 'DCAR_019553' => 'dca', 'DCAR_020952' => 'dca', 'DCAR_021739' => 'dca', 'DCAR_027407' => 'dca', 'DCAR_027913' => 'dca', 'DCAR_028066' => 'dca', 'Dinv05899' => 'din', 'Dinv07563' => 'din', 'Dinv08010' => 'din', 'Dinv14125' => 'din', 'Dinv20172' => 'din', 'Dinv30743' => 'din', 'Dinv31229' => 'din', 'Dinv34162' => 'din', 'Dinv36028' => 'din', 'Dinv39368' => 'din', 'Dinv40565' => 'din', 'Dinv41706' => 'din', 'Duzib052G0089' => 'dzi', 'Duzib116G0641' => 'dzi', 'Duzib132G0069' => 'dzi', 'Duzib132G1219' => 'dzi', 'Duzib147G0278' => 'dzi', 'Duzib160G0480' => 'dzi', 'Duzib170G0661' => 'dzi', 'Duzib177G0591' => 'dzi', 'Duzib187G1353' => 'dzi', 'Duzib192G0858' => 'dzi', 'Duzib192G0883' => 'dzi', 'Duzib213G0506' => 'dzi', 'Duzib235G0289' => 'dzi', 'Duzib251G0422' => 'dzi', 'ECA232G3898' => 'eca', 'ECA233G5950' => 'eca', 'ECA234G1699' => 'eca', 'ECA234G2421' => 'eca', 'ECA236G0426' => 'eca', 'ECA236G4331' => 'eca', 'ECA248G2573' => 'eca', 'EL10Ac1g00077' => 'bvu', 'EL10Ac1g01746' => 'bvu', 'EL10Ac2g03464' => 'bvu', 'EL10Ac4g08176' => 'bvu', 'EL10Ac7g17521' => 'bvu', 'EL10Ac8g20386' => 'bvu', 'EL10Ac9g21343' => 'bvu', 'EL10Ac9g22688' => 'bvu', 'Eucgr.B03434' => 'egr', 'Eucgr.D00618' => 'egr', 'Eucgr.E02395' => 'egr', 'Eucgr.F01129' => 'egr', 'Eucgr.F02622' => 'egr', 'Eucgr.F04207' => 'egr', 'FAN01G0570' => 'fan', 'FAN03G3351' => 'fan', 'FAN06G3702' => 'fan', 'FAN07G2149' => 'fan', 'FAN10G3758' => 'fan', 'FAN11G1170' => 'fan', 'FAN11G2050' => 'fan', 'FAN11G2724' => 'fan', 'FAN12G1700' => 'fan', 'FAN12G2028' => 'fan', 'FAN15G1160' => 'fan', 'FAN15G3063' => 'fan', 'FAN16G2540' => 'fan', 'FAN16G3077' => 'fan', 'FAN16G3624' => 'fan', 'FAN17G0221' => 'fan', 'FAN20G2492' => 'fan', 'FAN20G2905' => 'fan', 'FAN21G0548' => 'fan', 'FAN21G1300' => 'fan', 'FAN22G0077' => 'fan', 'FAN22G1315' => 'fan', 'FAN24G1280' => 'fan', 'FAN24G1445' => 'fan', 'FAN24G3527' => 'fan', 'FAN25G0464' => 'fan', 'FAN25G2885' => 'fan', 'FAN25G3270' => 'fan', 'FAN27G1101' => 'fan', 'FAN27G2846' => 'fan', 'FAN27G3524' => 'fan', 'FvH4_2g11770' => 'fve', 'FvH4_2g15630' => 'fve', 'FvH4_3g05570' => 'fve', 'FvH4_3g09110' => 'fve', 'FvH4_3g19940' => 'fve', 'FvH4_4g04821' => 'fve', 'FvH4_4g31480' => 'fve', 'FvH4_7g01740' => 'fve', 'Glyma.05G130400' => 'gma', 'Glyma.05G156400' => 'gma', 'Glyma.07G197000' => 'gma', 'Glyma.08G085151' => 'gma', 'Glyma.08G114500' => 'gma', 'Glyma.08G300400' => 'gma', 'Glyma.10G215800' => 'gma', 'Glyma.12G224400' => 'gma', 'Glyma.13G179300' => 'gma', 'Glyma.13G218151' => 'gma', 'Glyma.13G238800' => 'gma', 'Glyma.13G276900' => 'gma', 'Glyma.14G078200' => 'gma', 'Glyma.15G074500' => 'gma', 'Glyma.15G094100' => 'gma', 'Glyma.17G247200' => 'gma', 'Glyma.18G120100' => 'gma', 'Glyma.20G176000' => 'gma', 'Gohir.A01G063600' => 'ghi', 'Gohir.A01G170301' => 'ghi', 'Gohir.A02G060500' => 'ghi', 'Gohir.A05G133850' => 'ghi', 'Gohir.A05G161400' => 'ghi', 'Gohir.A06G012900' => 'ghi', 'Gohir.A06G035901' => 'ghi', 'Gohir.A06G127100' => 'ghi', 'Gohir.A06G210500' => 'ghi', 'Gohir.A08G008650' => 'ghi', 'Gohir.A09G072700' => 'ghi', 'Gohir.A09G088301' => 'ghi', 'Gohir.A10G040600' => 'ghi', 'Gohir.A12G036300' => 'ghi', 'Gohir.A12G143350' => 'ghi', 'Gohir.A12G165500' => 'ghi', 'Gohir.A13G145700' => 'ghi', 'Gohir.D01G050000' => 'ghi', 'Gohir.D01G051366' => 'ghi', 'Gohir.D01G161350' => 'ghi', 'Gohir.D02G065900' => 'ghi', 'Gohir.D05G164200' => 'ghi', 'Gohir.D05G355500' => 'ghi', 'Gohir.D06G010400' => 'ghi', 'Gohir.D06G111250' => 'ghi', 'Gohir.D06G132000' => 'ghi', 'Gohir.D06G210500' => 'ghi', 'Gohir.D07G165675' => 'ghi', 'Gohir.D08G062240' => 'ghi', 'Gohir.D08G086101' => 'ghi', 'Gohir.D08G138060' => 'ghi', 'Gohir.D09G072300' => 'ghi', 'Gohir.D10G041400' => 'ghi', 'Gohir.D11G191020' => 'ghi', 'Gohir.D11G212066' => 'ghi', 'Gohir.D12G036300' => 'ghi', 'Gohir.D12G168600' => 'ghi', 'Gohir.D13G150600' => 'ghi', 'Gorai.001G057300' => 'gra', 'Gorai.002G069900' => 'gra', 'Gorai.002G200000' => 'gra', 'Gorai.003G067600' => 'gra', 'Gorai.005G074800' => 'gra', 'Gorai.006G087300' => 'gra', 'Gorai.008G037500' => 'gra', 'Gorai.008G181400' => 'gra', 'Gorai.009G169400' => 'gra', 'Gorai.009G387900' => 'gra', 'Gorai.010G013300' => 'gra', 'Gorai.010G153800' => 'gra', 'Gorai.010G255800' => 'gra', 'Gorai.011G043700' => 'gra', 'Gorai.011G198900' => 'gra', 'Gorai.013G168400' => 'gra', 'GSVIVG01005212001' => 'vvi', 'GSVIVG01006163001' => 'vvi', 'GSVIVG01009625001' => 'vvi', 'GSVIVG01014338001' => 'vvi', 'GSVIVG01020005001' => 'vvi', 'GSVIVG01021450001' => 'vvi', 'GSVIVG01023975001' => 'vvi', 'GSVIVG01034490001' => 'vvi', 'HanXRQChr04g0112071' => 'han', 'HanXRQChr05g0131151' => 'han', 'HanXRQChr09g0262371' => 'han', 'HanXRQChr09g0268401' => 'han', 'HanXRQChr10g0279241' => 'han', 'HanXRQChr10g0297961' => 'han', 'HanXRQChr11g0326231' => 'han', 'HanXRQChr11g0328471' => 'han', 'HanXRQChr16g0507941' => 'han', 'HanXRQChr17g0560211' => 'han', 'Haze_02108' => 'cav', 'Haze_02428' => 'cav', 'Haze_05593' => 'cav', 'Haze_06448' => 'cav', 'Haze_09427' => 'cav', 'Haze_12022' => 'cav', 'Haze_17612' => 'cav', 'Haze_17928' => 'cav', 'Hma1.2p1_0032F.1_g019250' => 'hma', 'Hma1.2p1_0163F.1_g072690' => 'hma', 'Hma1.2p1_0265F.1_g106710' => 'hma', 'Hma1.2p1_0286F.1_g113970' => 'hma', 'Hma1.2p1_0363F.1_g136640' => 'hma', 'Hma1.2p1_0584F.1_g183470' => 'hma', 'Hma1.2p1_0885F.1_g232570' => 'hma', 'HPP92_006022' => 'vpl', 'HPP92_007320' => 'vpl', 'HPP92_011521' => 'vpl', 'HPP92_019387' => 'vpl', 'HPP92_024038' => 'vpl', 'Hund05891' => 'sun', 'Hund06450' => 'sun', 'Hund12053' => 'sun', 'Hund16800' => 'sun', 'Hund21222' => 'sun', 'Hund22896' => 'sun', 'Hund23746' => 'sun', 'Hund27083' => 'sun', 'Lalb_Chr02g0141831' => 'lal', 'Lalb_Chr02g0141841' => 'lal', 'Lalb_Chr05g0220411' => 'lal', 'Lalb_Chr06g0162081' => 'lal', 'Lalb_Chr09g0327651' => 'lal', 'Lalb_Chr13g0295051' => 'lal', 'Lalb_Chr15g0086801' => 'lal', 'Lalb_Chr16g0383781' => 'lal', 'Lalb_Chr16g0383791' => 'lal', 'Lalb_Chr18g0055441' => 'lal', 'Lalb_Chr18g0059611' => 'lal', 'Lalb_Chr20g0109661' => 'lal', 'Lalb_Chr20g0109831' => 'lal', 'Lalb_Chr20g0121871' => 'lal', 'Lalb_Chr22g0355361' => 'lal', 'Lalb_Chr25g0286371' => 'lal', 'Lj1A1187G43' => 'lonja', 'Lj1A1205T50' => 'lonja', 'Lj1A800G33' => 'lonja', 'Lj1C1187T7' => 'lonja', 'Lj1C843T11' => 'lonja', 'Lj1g0010940' => 'lja', 'Lj2A288T69' => 'lonja', 'Lj3g0024276' => 'lja', 'Lj4A47T76' => 'lonja', 'Lj4g0005805' => 'lja', 'Lj4g0006097' => 'lja', 'Lj4g0008528' => 'lja', 'Lj4g0024907' => 'lja', 'Lj5g0012472' => 'lja', 'Lj5g0018648' => 'lja', 'Lj6C789G1' => 'lonja', 'Lj6g0004000' => 'lja', 'Lj7A292G67' => 'lonja', 'Lj7A292T64' => 'lonja', 'Lj9A400T58' => 'lonja', 'Lsat_1_v5_gn_1_126181' => 'lsa', 'Lsat_1_v5_gn_4_123041' => 'lsa', 'Lsat_1_v5_gn_4_133620' => 'lsa', 'Lsat_1_v5_gn_4_53221' => 'lsa', 'Lsat_1_v5_gn_4_71961' => 'lsa', 'Lsat_1_v5_gn_7_105241' => 'lsa', 'Lsat_1_v5_gn_7_21361' => 'lsa', 'Lsat_1_v5_gn_7_28860' => 'lsa', 'Lsat_1_v5_gn_7_31260' => 'lsa', 'Lsat_1_v5_gn_8_52801' => 'lsa', 'Manes.02G191400' => 'mes', 'Manes.03G110100' => 'mes', 'Manes.04G071100' => 'mes', 'Manes.05G100500' => 'mes', 'Manes.05G164700' => 'mes', 'Manes.15G087000' => 'mes', 'Manes.15G121500' => 'mes', 'Manes.16G028300' => 'mes', 'Manes.17G046100' => 'mes', 'Manes.17G069800' => 'mes', 'Manes.18G100500' => 'mes', 'Mapoly0002s0109' => 'mpo', 'Mapoly0024s0007' => 'mpo', 'Mapoly0089s0032' => 'mpo', 'MBI04_g42241_MAGBIO' => 'mbi', 'MBI05_g11988_MAGBIO' => 'mbi', 'MBI05_g35452_MAGBIO' => 'mbi', 'MBI07_g30179_MAGBIO' => 'mbi', 'MBI07_g35859_MAGBIO' => 'mbi', 'MBI07_g35860_MAGBIO' => 'mbi', 'MBI07_g37166_MAGBIO' => 'mbi', 'MBI08_g18172_MAGBIO' => 'mbi', 'MBI09_g08441_MAGBIO' => 'mbi', 'MBI13_g01676_MAGBIO' => 'mbi', 'MBI14_g42955_MAGBIO' => 'mbi', 'MBI16_g13161_MAGBIO' => 'mbi', 'MBI17_g27204_MAGBIO' => 'mbi', 'MBI19_g21595_MAGBIO' => 'mbi', 'MD00G1148400' => 'mdo', 'MD02G1301200' => 'mdo', 'MD03G1227800' => 'mdo', 'MD05G1041100' => 'mdo', 'MD05G1124800' => 'mdo', 'MD05G1284000' => 'mdo', 'MD05G1338800' => 'mdo', 'MD05G1338900' => 'mdo', 'MD07G1022800' => 'mdo', 'MD10G1047500' => 'mdo', 'MD10G1127500' => 'mdo', 'MD10G1262300' => 'mdo', 'MD10G1293800' => 'mdo', 'MD16G1074300' => 'mdo', 'Medtr1g021670' => 'mtr', 'Medtr1g096320' => 'mtr', 'Medtr2g013690' => 'mtr', 'Medtr2g019450' => 'mtr', 'Medtr2g085170' => 'mtr', 'Medtr4g088785' => 'mtr', 'Medtr8g055930' => 'mtr', 'Medtr8g085850' => 'mtr', 'MELO3C002605.2' => 'cme', 'MELO3C003891.2' => 'cme', 'MELO3C004012.2' => 'cme', 'MELO3C007134.2' => 'cme', 'MELO3C008118.2' => 'cme', 'MELO3C016700.2' => 'cme', 'MELO3C024127.2' => 'cme', 'MELO3C033361.2' => 'cme', 'MELO3C033362.2' => 'cme', 'Migut.C00430' => 'egut', 'Migut.C01246' => 'egut', 'Migut.E00101' => 'egut', 'Migut.H01486' => 'egut', 'Migut.H01939' => 'egut', 'Migut.K00360' => 'egut', 'Migut.M00910' => 'egut', 'Migut.M01139' => 'egut', 'Migut.N02677' => 'egut', 'MSTRG.13252' => 'ama', 'MSTRG.14701' => 'ama', 'MSTRG.1521' => 'ama', 'MSTRG.15884' => 'ama', 'MSTRG.16242' => 'ama', 'MSTRG.22285' => 'ama', 'MSTRG.22444' => 'ama', 'MSTRG.2349' => 'ama', 'MSTRG.26308' => 'ama', 'MSTRG.28296' => 'ama', 'MSTRG.9895' => 'ama', 'Nitab4.5_0000110g0060' => 'nta', 'Nitab4.5_0000420g0130' => 'nta', 'Nitab4.5_0000422g0030' => 'nta', 'Nitab4.5_0000560g0180' => 'nta', 'Nitab4.5_0000703g0100' => 'nta', 'Nitab4.5_0000786g0200' => 'nta', 'Nitab4.5_0001336g0020' => 'nta', 'Nitab4.5_0001796g0030' => 'nta', 'Nitab4.5_0003348g0060' => 'nta', 'Nitab4.5_0003698g0040' => 'nta', 'Nitab4.5_0003942g0090' => 'nta', 'Nitab4.5_0004775g0070' => 'nta', 'Nitab4.5_0004864g0030' => 'nta', 'Nitab4.5_0005615g0020' => 'nta', 'Nitab4.5_0009288g0030' => 'nta', 'Nitab4.5_0009341g0010' => 'nta', 'Nitab4.5_0009535g0010' => 'nta', 'Nn1g03995' => 'nnu', 'Nn1g04100' => 'nnu', 'Nn1g06530' => 'nnu', 'Nn3g16404' => 'nnu', 'Nn3g17212' => 'nnu', 'Nn3g20776' => 'nnu', 'Nn3g21923' => 'nnu', 'Nn5g27737' => 'nnu', 'Nn5g29461' => 'nnu', 'Nn7g38355' => 'nnu', 'Nn8g39873' => 'nnu', 'Oeu000548.2' => 'oeu', 'Oeu004672.1' => 'oeu', 'Oeu015605.2' => 'oeu', 'Oeu016092.1' => 'oeu', 'Oeu017879.3' => 'oeu', 'Oeu024910.1' => 'oeu', 'Oeu028965.1' => 'oeu', 'Oeu031269.1' => 'oeu', 'Oeu031270.1' => 'oeu', 'Oeu032535.1' => 'oeu', 'Oeu034151.1' => 'oeu', 'Oeu034152.1' => 'oeu', 'Oeu034588.2' => 'oeu', 'Oeu050846.1' => 'oeu', 'Oeu050849.2' => 'oeu', 'Oeu051063.2' => 'oeu', 'Oeu052368.1' => 'oeu', 'Oeu052370.1' => 'oeu', 'Os01g0210400' => 'osa', 'Os01g0304300' => 'osa', 'Os01g0749100' => 'osa', 'Os02g0745800' => 'osa', 'Os03g0769050' => 'osa', 'Os05g0531500' => 'osa', 'Os06g0724300' => 'osa', 'Os11g0198100' => 'osa', 'Peaxi162Scf00069g01425' => 'pax', 'Peaxi162Scf00280g00811' => 'pax', 'Peaxi162Scf00310g00615' => 'pax', 'Peaxi162Scf00362g00542' => 'pax', 'Peaxi162Scf00461g00310' => 'pax', 'Peaxi162Scf00530g00118' => 'pax', 'Peaxi162Scf00541g00057' => 'pax', 'Peaxi162Scf00661g00017' => 'pax', 'Peaxi162Scf00926g00027' => 'pax', 'Peaxi162Scf01064g00263' => 'pax', 'Peaxi162Scf01211g00135' => 'pax', 'PGR004G2336' => 'pgr', 'PGR042G0327' => 'pgr', 'PGR042G1957' => 'pgr', 'PGR042G2003' => 'pgr', 'PGR042G3929' => 'pgr', 'PGR083G1137' => 'pgr', 'PGR083G1364' => 'pgr', 'PGSC0003DMG400003381' => 'stu', 'PGSC0003DMG400003417' => 'stu', 'PGSC0003DMG400008981' => 'stu', 'PGSC0003DMG400012417' => 'stu', 'PGSC0003DMG400012823' => 'stu', 'PGSC0003DMG400016885' => 'stu', 'PGSC0003DMG400022812' => 'stu', 'PGSC0003DMG400029726' => 'stu', 'PGSC0003DMG401009243' => 'stu', 'PGSC0003DMG401031505' => 'stu', 'PGSC0003DMG402031505' => 'stu', 'Phvul.001G017600' => 'pvu', 'Phvul.002G193500' => 'pvu', 'Phvul.002G228900' => 'pvu', 'Phvul.002G236800' => 'pvu', 'Phvul.003G049500' => 'pvu', 'Phvul.005G072000' => 'pvu', 'Phvul.006G164800' => 'pvu', 'Phvul.006G185100' => 'pvu', 'Phvul.007G090000' => 'pvu', 'Potri.001G399800' => 'ptr', 'Potri.002G149900' => 'ptr', 'Potri.004G044100' => 'ptr', 'Potri.004G177600' => 'ptr', 'Potri.009G138000' => 'ptr', 'Potri.010G094000' => 'ptr', 'Potri.011G053000' => 'ptr', 'Potri.011G119300' => 'ptr', 'Potri.013G113700' => 'ptr', 'Potri.018G107800' => 'ptr', 'Potri.019G084100' => 'ptr', 'Pp3c14_23720' => 'ppa', 'Pp3c16_6340' => 'ppa', 'Pp3c23_13420' => 'ppa', 'Pp3c24_2740' => 'ppa', 'Pp3c25_860' => 'ppa', 'Pp3c8_21750' => 'ppa', 'Prupe.1G273000' => 'ppe', 'Prupe.1G273700' => 'ppe', 'Prupe.1G274100' => 'ppe', 'Prupe.2G023300' => 'ppe', 'Prupe.4G048000' => 'ppe', 'Prupe.4G080400' => 'ppe', 'Prupe.4G181200' => 'ppe', 'Prupe.8G056900' => 'ppe', 'Prupe.8G168700' => 'ppe', 'Psat1g189080' => 'psa', 'Psat1g204760' => 'psa', 'Psat4g175560' => 'psa', 'Psat4g177720' => 'psa', 'Psat5g244240' => 'psa', 'Psat6g010720' => 'psa', 'Psat6g187200' => 'psa', 'Psat7g072040' => 'psa', 'PSO017G3501' => 'pso', 'PSO063G2148' => 'pso', 'PSO063G5608' => 'pso', 'PSO210G6392' => 'pso', 'PSO541G2319' => 'pso', 'PSO541G2836' => 'pso', 'PSO541G4012' => 'pso', 'PSO541G6253' => 'pso', 'PSO675G0580' => 'pso', 'PSO675G0856' => 'pso', 'PSO675G5635' => 'pso', 'PSO675G9157' => 'pso', 'PSO832G1660' => 'pso', 'PSO832G1969' => 'pso', 'QL02p007186' => 'qlo', 'QL02p033904' => 'qlo', 'QL03p064391' => 'qlo', 'QL05p040593' => 'qlo', 'QL05p058242' => 'qlo', 'QL08p021825' => 'qlo', 'QL11p004981' => 'qlo', 'RcHm_v2.0_Chr1g0318301' => 'rch', 'RcHm_v2.0_Chr4g0418501' => 'rch', 'RcHm_v2.0_Chr4g0439971' => 'rch', 'RcHm_v2.0_Chr5g0008541' => 'rch', 'RcHm_v2.0_Chr5g0014101' => 'rch', 'RcHm_v2.0_Chr5g0014131' => 'rch', 'RcHm_v2.0_Chr5g0033621' => 'rch', 'RcHm_v2.0_Chr6g0272041' => 'rch', 'RcHm_v2.0_Chr6g0278831' => 'rch', 'Rhsim02G0130400' => 'rsi', 'Rhsim02G0171100' => 'rsi', 'Rhsim05G0053000' => 'rsi', 'Rhsim05G0053100' => 'rsi', 'Rhsim06G0096500' => 'rsi', 'Rhsim06G0096600' => 'rsi', 'Rhsim06G0199100' => 'rsi', 'Rhsim12G0062300' => 'rsi', 'Rhsim12G0062800' => 'rsi', 'Sabra02G0118600' => 'sbr', 'Sabra04G0027300' => 'sbr', 'Sabra04G0119500' => 'sbr', 'Sabra08G0112500' => 'sbr', 'Sabra11G0036800' => 'sbr', 'Sabra11G0103800' => 'sbr', 'Sabra13G0096300' => 'sbr', 'Sabra16G0262300' => 'sbr', 'Sabra18G0091700' => 'sbr', 'Sabra19G0095400' => 'sbr', 'SalBow6G3080' => 'sbo', 'SalBow7G1157' => 'sbo', 'SalBow7G2123' => 'sbo', 'SalBow7G2285' => 'sbo', 'SalBow7G3537' => 'sbo', 'SalBow8G2947' => 'sbo', 'SalBow8G4463' => 'sbo', 'SalBow8G5466' => 'sbo', 'Sc01g0001750' => 'sci', 'Sc02g0006640' => 'sci', 'Sc02g0006670' => 'sci', 'Sc04g0008220' => 'sci', 'Sc05g0006190' => 'sci', 'Sc08g0002760' => 'sci', 'Sc17g0006170' => 'sci', 'Sc22g0002050' => 'sci', 'Sc23g0001190' => 'sci', 'Sc24g0000980' => 'sci', 'Sed0006245' => 'sed', 'Sed0007543' => 'sed', 'Sed0009411' => 'sed', 'Sed0010765' => 'sed', 'Sed0012944' => 'sed', 'Sed0014682' => 'sed', 'Sed0016174' => 'sed', 'Sed0016796' => 'sed', 'Sed0020317' => 'sed', 'Sed0021467' => 'sed', 'SEGI_01316' => 'sgi', 'SEGI_03374' => 'sgi', 'SEGI_16265' => 'sgi', 'SEGI_18569' => 'sgi', 'SEGI_20351' => 'sgi', 'SEGI_26395' => 'sgi', 'SEGI_29469' => 'sgi', 'SEGI_34771' => 'sgi', 'SEGI_36769' => 'sgi', 'SEGI_37139' => 'sgi', 'SGA_v2.0_scaffold100G29687' => 'sas', 'SGA_v2.0_scaffold118G32472' => 'sas', 'SGA_v2.0_scaffold14G07051' => 'sas', 'SGA_v2.0_scaffold183G39845' => 'sas', 'SGA_v2.0_scaffold1G00174' => 'sas', 'SGA_v2.0_scaffold22G09714' => 'sas', 'SGA_v2.0_scaffold333G48992' => 'sas', 'SGA_v2.0_scaffold46G17491' => 'sas', 'SGA_v2.0_scaffold49G18294' => 'sas', 'SGA_v2.0_scaffold63G21658' => 'sas', 'SHI01741' => 'shi', 'SHI05771' => 'shi', 'SHI18077' => 'shi', 'SHI20525' => 'shi', 'SHI20527' => 'shi', 'SHI20528' => 'shi', 'SMO172G0185' => 'smo', 'SMO198G0020' => 'smo', 'SMO351G0006' => 'smo', 'SMO356G0118' => 'smo', 'SMO358G0296' => 'smo', 'SMO367G0079' => 'smo', 'SMO367G1277' => 'smo', 'Solyc01g014220.3' => 'sly', 'Solyc01g111770.2' => 'sly', 'Solyc02g078180.3' => 'sly', 'Solyc03g006430.3' => 'sly', 'Solyc03g006456.1' => 'sly', 'Solyc03g079860.2' => 'sly', 'Solyc04g079770.3' => 'sly', 'Solyc05g007430.4' => 'sly', 'Solyc07g063150.3' => 'sly', 'Solyc08g016620.3' => 'sly', 'Solyc09g057590.3' => 'sly', 'Solyc09g057600.1' => 'sly', 'Solyc10g009050.3' => 'sly', 'Solyc11g017420.2' => 'sly', 'Sopen01g053810' => 'spe', 'Sopen02g023040' => 'spe', 'Sopen03g002440' => 'spe', 'Sopen04g033350' => 'spe', 'Sopen05g003310' => 'spe', 'Sopen07g004050' => 'spe', 'Sopen07g031340' => 'spe', 'Sopen08g006990' => 'spe', 'Sopen10g004830' => 'spe', 'Sopen11g009370' => 'spe', 'Sp1g24450' => 'spa', 'Sp1g29670' => 'spa', 'Sp1g39600' => 'spa', 'Sp2g11080' => 'spa', 'Sp2g13970' => 'spa', 'Sp4g16130' => 'spa', 'Sp6g13080' => 'spa', 'Sp7g37270' => 'spa', 'TAR371G0065' => 'tar', 'TAR376G0340' => 'tar', 'TAR376G0435' => 'tar', 'TAR381G0002' => 'tar', 'TAR381G1236' => 'tar', 'TAR624G0055' => 'tar', 'TAR624G0324' => 'tar', 'TAR624G0696' => 'tar', 'TAR624G0906' => 'tar', 'TAR625G0107' => 'tar', 'TAR626G0015' => 'tar', 'TAR626G1356' => 'tar', 'TAR627G0888' => 'tar', 'TAR628G0399' => 'tar', 'TAR628G1327' => 'tar', 'TAR629G2831' => 'tar', 'TAR629G2874' => 'tar', 'TAR633G1432' => 'tar', 'TAR633G2771' => 'tar', 'THA.LOC104803394' => 'tha', 'THA.LOC104805153' => 'tha', 'THA.LOC104806784' => 'tha', 'THA.LOC104810473' => 'tha', 'THA.LOC104813100' => 'tha', 'THA.LOC104814215' => 'tha', 'THA.LOC104815554' => 'tha', 'THA.LOC104820544' => 'tha', 'THA.LOC104824754' => 'tha', 'THA.LOC104827717' => 'tha', 'Thecc.02G031400' => 'tca', 'Thecc.02G055900' => 'tca', 'Thecc.02G350800' => 'tca', 'Thecc.06G150900' => 'tca', 'Thecc.06G186600' => 'tca', 'Thecc.07G089600' => 'tca', 'Thecc.08G020400' => 'tca', 'Thecc.08G182100' => 'tca', 'Thhalv10000873m.g' => 'esa', 'Thhalv10004185m.g' => 'esa', 'Thhalv10006981m.g' => 'esa', 'Thhalv10007204m.g' => 'esa', 'Thhalv10011374m.g' => 'esa', 'Thhalv10013482m.g' => 'esa', 'Thhalv10017801m.g' => 'esa', 'Thhalv10024983m.g' => 'esa', 'TPR.G12072' => 'tpr', 'TPR.G15769' => 'tpr', 'TPR.G16504' => 'tpr', 'TPR.G16506' => 'tpr', 'TPR.G24345' => 'tpr', 'TPR.G26666' => 'tpr', 'TPR.G27320' => 'tpr', 'TPR.G31819' => 'tpr', 'TPR.G38879' => 'tpr', 'TPR.G39015' => 'tpr', 'TPR.G8819' => 'tpr', 'TWI09G0924' => 'twi', 'TWI12G0811' => 'twi', 'TWI12G1294' => 'twi', 'TWI31G0150' => 'twi', 'TWI36G1262' => 'twi', 'TWI38G1287' => 'twi', 'TWI38G1633' => 'twi', 'TWI38G1982' => 'twi', 'TWI39G0116' => 'twi', 'TWI60G1011' => 'twi', 'TWI63G0171' => 'twi', 'TWI73G0839' => 'twi', 'TWI79G1511' => 'twi', 'unitig_0.g915' => 'ugi', 'unitig_0.g916' => 'ugi', 'unitig_21.g20219' => 'ugi', 'unitig_21.g20416' => 'ugi', 'unitig_578.g16132' => 'ugi', 'unitig_578.g16718' => 'ugi', 'unitig_62.g23481' => 'ugi', 'unitig_744.g24535' => 'ugi', 'unitig_749.g13525' => 'ugi', 'vmacro01248' => 'vma', 'vmacro02290' => 'vma', 'vmacro10946' => 'vma', 'vmacro11865' => 'vma', 'vmacro12493' => 'vma', 'vmacro17322' => 'vma', 'vmacro21599' => 'vma', 'vmacro23041' => 'vma', 'VMungo0251G0004' => 'vmu', 'VMungo0251G2639' => 'vmu', 'VMungo0251G2967' => 'vmu', 'VMungo0540G0864' => 'vmu', 'VMungo0540G1569' => 'vmu', 'VMungo0647G0317' => 'vmu', 'VMungo0720G1373' => 'vmu', 'VMungo0720G1508' => 'vmu', 'VMungo1080G0485' => 'vmu', 'VMungo1215G3177' => 'vmu', 'Zm00001eb112600' => 'zma', 'Zm00001eb120220' => 'zma', 'Zm00001eb153240' => 'zma', 'Zm00001eb168880' => 'zma', 'Zm00001eb213920' => 'zma', 'Zm00001eb228280' => 'zma', 'Zm00001eb254580' => 'zma', 'Zm00001eb272180' => 'zma', 'Zm00001eb293190' => 'zma', 'Zm00001eb322930' => 'zma', 'Zm00001eb353360' => 'zma', 'Zm00001eb353390' => 'zma', 'Zm00001eb353430' => 'zma', 'Zm00001eb353440' => 'zma', 'Zm00001eb353780' => 'zma' ), 'gf_id' => 'HOM05D000499', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000499' ), 'data_identifier' => 'HOM05D000499', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000499', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1066', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p29780' => 'bna', 'A02p33180' => 'bna', 'A03p16470' => 'bna', 'A03p66010' => 'bna', 'A04p25970' => 'bna', 'A06p01270' => 'bna', 'A06p46080' => 'bna', 'A07p11400' => 'bna', 'A08p01840' => 'bna', 'A08p08230' => 'bna', 'A08p25740' => 'bna', 'A09p32070' => 'bna', 'A09p37830' => 'bna', 'A09p42840' => 'bna', 'A09p42850' => 'bna', 'Aa31LG10G2060' => 'aar', 'Aa31LG2G7410' => 'aar', 'Aa31LG6G10200' => 'aar', 'Aa31LG6G16680' => 'aar', 'Aa31LG6G8470' => 'aar', 'Aa31LG9G12730' => 'aar', 'Aa31LG9G13680' => 'aar', 'Aa31LG9G14920' => 'aar', 'Aa31LG9G6650' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4977' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5467' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3254' => 'aag', 'Actinidia02578' => 'ach', 'Actinidia07693' => 'ach', 'Actinidia08413' => 'ach', 'Actinidia08414' => 'ach', 'Actinidia15289' => 'ach', 'Actinidia19871' => 'ach', 'Actinidia21475' => 'ach', 'Actinidia22576' => 'ach', 'Actinidia28327' => 'ach', 'Actinidia32491' => 'ach', 'Actinidia39463' => 'ach', 'Actinidia39571' => 'ach', 'Ah.01g013750' => 'amhyb', 'Ah.01g023210' => 'amhyb', 'Ah.04g164850' => 'amhyb', 'Ah.05g178060' => 'amhyb', 'Ah.07g204270' => 'amhyb', 'Ah.07g208480' => 'amhyb', 'Ah.09g237410' => 'amhyb', 'Ah.14g089460' => 'amhyb', 'AL1G41790' => 'aly', 'AL1G49050' => 'aly', 'AL1G53810' => 'aly', 'AL1G61400' => 'aly', 'AL4G18580' => 'aly', 'AL5G12510' => 'aly', 'AL5G12540' => 'aly', 'AL6G43230' => 'aly', 'AL7G10370' => 'aly', 'AL7G19250' => 'aly', 'AL8G12240' => 'aly', 'AL8G18540' => 'aly', 'Aqoxy1G02409' => 'aox', 'Aqoxy2G03993' => 'aox', 'Aqoxy3G03357' => 'aox', 'Aqoxy4G00785' => 'aox', 'Aqoxy5G02598' => 'aox', 'Aqoxy6G00132' => 'aox', 'Aqoxy7G01776' => 'aox', 'Aqoxy7G02316' => 'aox', 'Aqoxy7G03973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.12AFKW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B8730' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27IQR1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3F75VG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3RE0GA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41TCQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.527VTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FIR39' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5W8UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DA38EV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ63HS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H1I32C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HC27T5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4M8AP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7N3CZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9UVDZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LS1NQA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT1D4B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SKC4TM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCFV76' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF9Q1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQWD9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1ZM88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WE07RT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YCK7VH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJE6Q6' => 'arhy', 'AT1G28240' => 'ath', 'AT1G34550' => 'ath', 'AT1G53040' => 'ath', 'AT2G02910' => 'ath', 'AT4G09630' => 'ath', 'AT4G38500' => 'ath', 'AT5G42660' => 'ath', 'AT5G46220' => 'ath', 'ATR0152G026' => 'atr', 'ATR0564G343' => 'atr', 'ATR0706G151' => 'atr', 'ATR0733G207' => 'atr', 'ATR0751G234' => 'atr', 'ATR0807G048' => 'atr', 'ATR1091G084' => 'atr', 'Atru.chr10.1229' => 'acertr', 'Atru.chr10.1230' => 'acertr', 'Atru.chr10.1874' => 'acertr', 'Atru.chr11.1808' => 'acertr', 'Atru.chr13.1795' => 'acertr', 'Atru.chr13.570' => 'acertr', 'Atru.chr2.2608' => 'acertr', 'Atru.chr2.2609' => 'acertr', 'Atru.chr5.3428' => 'acertr', 'Atru.chr8.1171' => 'acertr', 'AUR62004651' => 'cqu', 'AUR62008675' => 'cqu', 'AUR62010014' => 'cqu', 'AUR62013004' => 'cqu', 'AUR62014825' => 'cqu', 'AUR62015015' => 'cqu', 'AUR62015151' => 'cqu', 'AUR62017020' => 'cqu', 'AUR62019422' => 'cqu', 'AUR62023570' => 'cqu', 'AUR62025571' => 'cqu', 'AUR62029098' => 'cqu', 'AUR62033863' => 'cqu', 'AUR62034296' => 'cqu', 'AUR62040075' => 'cqu', 'BcaB02g07334' => 'bca', 'BcaB02g10575' => 'bca', 'BcaB03g12119' => 'bca', 'BcaB03g12120' => 'bca', 'BcaB03g13945' => 'bca', 'BcaB04g17123' => 'bca', 'BcaB04g17867' => 'bca', 'BcaB04g19839' => 'bca', 'BcaB07g30317' => 'bca', 'BcaB07g32432' => 'bca', 'BcaB07g33362' => 'bca', 'BcaB08g36611' => 'bca', 'BcaC01g00028' => 'bca', 'BcaC01g01356' => 'bca', 'BcaC01g02034' => 'bca', 'BcaC01g06051' => 'bca', 'BcaC03g16839' => 'bca', 'BcaC03g17176' => 'bca', 'BcaC05g26829' => 'bca', 'BcaC06g31490' => 'bca', 'BcaC06g35344' => 'bca', 'BcaC06g36570' => 'bca', 'BcaC07g37537' => 'bca', 'BcaC08g43491' => 'bca', 'BcaC08g43773' => 'bca', 'BcaNung00234' => 'bca', 'BcaNung01982' => 'bca', 'BcaNung03707' => 'bca', 'BcaNung06454' => 'bca', 'BolC2t10762H' => 'bol', 'BolC2t11191H' => 'bol', 'BolC3t14322H' => 'bol', 'BolC3t19747H' => 'bol', 'BolC3t21425H' => 'bol', 'BolC4t27800H' => 'bol', 'BolC5t31423H' => 'bol', 'BolC6t35951H' => 'bol', 'BolC6t36282H' => 'bol', 'BolC7t40678H' => 'bol', 'BolC7t40679H' => 'bol', 'BolC7t42222H' => 'bol', 'BolC7t43492H' => 'bol', 'BolC7t46785H' => 'bol', 'BolC8t47853H' => 'bol', 'BolC9t56805H' => 'bol', 'BraA02t08000Z' => 'bra', 'BraA02t08341Z' => 'bra', 'BraA03t10936Z' => 'bra', 'BraA03t15657Z' => 'bra', 'BraA04t18100Z' => 'bra', 'BraA05t20523Z' => 'bra', 'BraA06t23353Z' => 'bra', 'BraA06t27473Z' => 'bra', 'BraA06t27769Z' => 'bra', 'BraA07t28928Z' => 'bra', 'BraA08t32236Z' => 'bra', 'BraA08t32841Z' => 'bra', 'BraA08t34524Z' => 'bra', 'BraA09t38742Z' => 'bra', 'BraA09t39295Z' => 'bra', 'C02p47180' => 'bna', 'C02p50990' => 'bna', 'C03p19360' => 'bna', 'C03p74950' => 'bna', 'C03p91000' => 'bna', 'C04p63260' => 'bna', 'C05p27050' => 'bna', 'C06p08750' => 'bna', 'C06p11490' => 'bna', 'C07p02820' => 'bna', 'C07p17180' => 'bna', 'C07p29440' => 'bna', 'C07p63730' => 'bna', 'C09p39260' => 'bna', 'CAN.G1164.34' => 'can', 'CAN.G1164.39' => 'can', 'CAN.G1530.3' => 'can', 'CAN.G162.61' => 'can', 'CAN.G176.6' => 'can', 'CAN.G289.49' => 'can', 'CAN.G370.21' => 'can', 'CAN.G370.22' => 'can', 'CAN.G371.117' => 'can', 'CAN.G58.37' => 'can', 'CAN.G588.98' => 'can', 'CANSAT21G2266' => 'cansat', 'CANSAT25G2799' => 'cansat', 'CANSAT35G0862' => 'cansat', 'CANSAT35G1704' => 'cansat', 'CANSAT35G1760' => 'cansat', 'CANSAT56G3971' => 'cansat', 'CANSAT56G4116' => 'cansat', 'CANSAT80G1259' => 'cansat', 'CARHR027730' => 'chi', 'CARHR033880' => 'chi', 'CARHR043270' => 'chi', 'CARHR145330' => 'chi', 'CARHR145340' => 'chi', 'CARHR175570' => 'chi', 'CARHR181570' => 'chi', 'CARHR258470' => 'chi', 'CARHR260490' => 'chi', 'CARHR294220' => 'chi', 'Carub.0001s2668' => 'cru', 'Carub.0001s3257' => 'cru', 'Carub.0001s4220' => 'cru', 'Carub.0005s0179' => 'cru', 'Carub.0006s2807' => 'cru', 'Carub.0007s0039' => 'cru', 'Carub.0008s0169' => 'cru', 'Carub.0008s0636' => 'cru', 'Ca_00338_v3' => 'car', 'Ca_00542_v3' => 'car', 'Ca_01844_v3' => 'car', 'Ca_10611_v3' => 'car', 'Ca_13326_v3' => 'car', 'Ca_17944_v3' => 'car', 'Ca_18546_v3' => 'car', 'Ca_24219_v3' => 'car', 'Ca_29972_v3' => 'car', 'CBR_g3681' => 'cbr', 'CBR_g40021' => 'cbr', 'Cc01_g08140' => 'ccan', 'Cc02_g13410' => 'ccan', 'Cc02_g37480' => 'ccan', 'Cc05_g12030' => 'ccan', 'Cc09_g03370' => 'ccan', 'Cc09_g10300' => 'ccan', 'Cc10_g03530' => 'ccan', 'Cc10_g11380' => 'ccan', 'CDE01G0176' => 'cde', 'CDE02G0675' => 'cde', 'CDE02G0942' => 'cde', 'CDE02G1153' => 'cde', 'CDE02G4177' => 'cde', 'CDE04G2117' => 'cde', 'CDE04G2736' => 'cde', 'CDE08G1161' => 'cde', 'CDE09G1238' => 'cde', 'Cfa000467' => 'cfa', 'Cfa000947' => 'cfa', 'Cfa004969' => 'cfa', 'Cfa005284' => 'cfa', 'Cfa008993' => 'cfa', 'Cfa018187' => 'cfa', 'Cfa018454' => 'cfa', 'Cfa020585' => 'cfa', 'Ciclev10000424m.g' => 'ccl', 'Ciclev10003605m.g' => 'ccl', 'Ciclev10007828m.g' => 'ccl', 'Ciclev10014620m.g' => 'ccl', 'Ciclev10015169m.g' => 'ccl', 'Ciclev10018291m.g' => 'ccl', 'Ciclev10028256m.g' => 'ccl', 'Ciclev10033822m.g' => 'ccl', 'CiPaw.05G060300' => 'cil', 'CiPaw.05G085000' => 'cil', 'CiPaw.06G083700' => 'cil', 'CiPaw.06G120300' => 'cil', 'CiPaw.09G060500' => 'cil', 'CiPaw.09G123800' => 'cil', 'CiPaw.11G169700' => 'cil', 'CiPaw.12G118300' => 'cil', 'CiPaw.15G071000' => 'cil', 'CiPaw.15G081900' => 'cil', 'ClCG01G024610' => 'cla', 'ClCG03G006070' => 'cla', 'ClCG05G019250' => 'cla', 'ClCG09G009500' => 'cla', 'ClCG11G008200' => 'cla', 'ClCG11G018080' => 'cla', 'COL.COLO4_17373' => 'col', 'COL.COLO4_22994' => 'col', 'COL.COLO4_26389' => 'col', 'COL.COLO4_27170' => 'col', 'COL.COLO4_31074' => 'col', 'COL.COLO4_31465' => 'col', 'COL.COLO4_36438' => 'col', 'COL.COLO4_36439' => 'col', 'Cpa.g.c38781' => 'cpa', 'Cpa.g.sc128.12' => 'cpa', 'Cpa.g.sc166.7' => 'cpa', 'Cpa.g.sc166.8' => 'cpa', 'Cpa.g.sc20.111' => 'cpa', 'Cpa.g.sc27.31' => 'cpa', 'Cpa.g.sc64.36' => 'cpa', 'Cpa.g.sc64.37' => 'cpa', 'Cpa.g.sc66.49' => 'cpa', 'Cpa.g.sc80.64' => 'cpa', 'CsaV3_1G012320' => 'csa', 'CsaV3_2G008480' => 'csa', 'CsaV3_2G033450' => 'csa', 'CsaV3_3G044830' => 'csa', 'CsaV3_4G033710' => 'csa', 'CsaV3_6G051730' => 'csa', 'CsaV3_7G025350' => 'csa', 'CSS0001067' => 'camsi', 'CSS0005996' => 'camsi', 'CSS0006590' => 'camsi', 'CSS0009673' => 'camsi', 'CSS0010201' => 'camsi', 'CSS0010549' => 'camsi', 'CSS0011364' => 'camsi', 'CSS0014473' => 'camsi', 'CSS0014961' => 'camsi', 'CSS0020191' => 'camsi', 'CSS0021165' => 'camsi', 'CSS0022306' => 'camsi', 'CSS0030591' => 'camsi', 'CSS0030696' => 'camsi', 'CSS0032653' => 'camsi', 'CSS0037487' => 'camsi', 'CSS0041102' => 'camsi', 'CSS0041261' => 'camsi', 'CSS0046246' => 'camsi', 'CSS0049256' => 'camsi', 'DCAR_004075' => 'dca', 'DCAR_011538' => 'dca', 'DCAR_019553' => 'dca', 'DCAR_020952' => 'dca', 'DCAR_021739' => 'dca', 'DCAR_027407' => 'dca', 'DCAR_027913' => 'dca', 'DCAR_028066' => 'dca', 'Dinv05899' => 'din', 'Dinv07563' => 'din', 'Dinv08010' => 'din', 'Dinv14125' => 'din', 'Dinv20172' => 'din', 'Dinv30743' => 'din', 'Dinv31229' => 'din', 'Dinv34162' => 'din', 'Dinv36028' => 'din', 'Dinv39368' => 'din', 'Dinv40565' => 'din', 'Dinv41706' => 'din', 'Duzib052G0089' => 'dzi', 'Duzib116G0641' => 'dzi', 'Duzib132G0069' => 'dzi', 'Duzib132G1219' => 'dzi', 'Duzib147G0278' => 'dzi', 'Duzib160G0480' => 'dzi', 'Duzib170G0661' => 'dzi', 'Duzib177G0591' => 'dzi', 'Duzib187G1353' => 'dzi', 'Duzib192G0858' => 'dzi', 'Duzib192G0883' => 'dzi', 'Duzib213G0506' => 'dzi', 'Duzib235G0289' => 'dzi', 'Duzib251G0422' => 'dzi', 'ECA232G3898' => 'eca', 'ECA233G5950' => 'eca', 'ECA234G1699' => 'eca', 'ECA234G2421' => 'eca', 'ECA236G0426' => 'eca', 'ECA236G4331' => 'eca', 'ECA248G2573' => 'eca', 'EL10Ac1g00077' => 'bvu', 'EL10Ac1g01746' => 'bvu', 'EL10Ac2g03464' => 'bvu', 'EL10Ac4g08176' => 'bvu', 'EL10Ac7g17521' => 'bvu', 'EL10Ac8g20386' => 'bvu', 'EL10Ac9g21343' => 'bvu', 'EL10Ac9g22688' => 'bvu', 'Eucgr.B03434' => 'egr', 'Eucgr.D00618' => 'egr', 'Eucgr.E02395' => 'egr', 'Eucgr.F01129' => 'egr', 'Eucgr.F02622' => 'egr', 'Eucgr.F04207' => 'egr', 'FAN01G0570' => 'fan', 'FAN03G3351' => 'fan', 'FAN06G3702' => 'fan', 'FAN07G2149' => 'fan', 'FAN10G3758' => 'fan', 'FAN11G1170' => 'fan', 'FAN11G2050' => 'fan', 'FAN11G2724' => 'fan', 'FAN12G1700' => 'fan', 'FAN12G2028' => 'fan', 'FAN15G1160' => 'fan', 'FAN15G3063' => 'fan', 'FAN16G2540' => 'fan', 'FAN16G3077' => 'fan', 'FAN16G3624' => 'fan', 'FAN17G0221' => 'fan', 'FAN20G2492' => 'fan', 'FAN20G2905' => 'fan', 'FAN21G0548' => 'fan', 'FAN21G1300' => 'fan', 'FAN22G0077' => 'fan', 'FAN22G1315' => 'fan', 'FAN24G1280' => 'fan', 'FAN24G1445' => 'fan', 'FAN24G3527' => 'fan', 'FAN25G0464' => 'fan', 'FAN25G2885' => 'fan', 'FAN25G3270' => 'fan', 'FAN27G1101' => 'fan', 'FAN27G2846' => 'fan', 'FAN27G3524' => 'fan', 'FvH4_2g11770' => 'fve', 'FvH4_2g15630' => 'fve', 'FvH4_3g05570' => 'fve', 'FvH4_3g09110' => 'fve', 'FvH4_3g19940' => 'fve', 'FvH4_4g04821' => 'fve', 'FvH4_4g31480' => 'fve', 'FvH4_7g01740' => 'fve', 'Glyma.05G130400' => 'gma', 'Glyma.05G156400' => 'gma', 'Glyma.07G197000' => 'gma', 'Glyma.08G085151' => 'gma', 'Glyma.08G114500' => 'gma', 'Glyma.08G300400' => 'gma', 'Glyma.10G215800' => 'gma', 'Glyma.12G224400' => 'gma', 'Glyma.13G179300' => 'gma', 'Glyma.13G218151' => 'gma', 'Glyma.13G238800' => 'gma', 'Glyma.13G276900' => 'gma', 'Glyma.14G078200' => 'gma', 'Glyma.15G074500' => 'gma', 'Glyma.15G094100' => 'gma', 'Glyma.17G247200' => 'gma', 'Glyma.18G120100' => 'gma', 'Glyma.20G176000' => 'gma', 'Gohir.A01G063600' => 'ghi', 'Gohir.A01G170301' => 'ghi', 'Gohir.A02G060500' => 'ghi', 'Gohir.A05G133850' => 'ghi', 'Gohir.A05G161400' => 'ghi', 'Gohir.A06G012900' => 'ghi', 'Gohir.A06G035901' => 'ghi', 'Gohir.A06G127100' => 'ghi', 'Gohir.A06G210500' => 'ghi', 'Gohir.A08G008650' => 'ghi', 'Gohir.A09G072700' => 'ghi', 'Gohir.A09G088301' => 'ghi', 'Gohir.A10G040600' => 'ghi', 'Gohir.A12G036300' => 'ghi', 'Gohir.A12G143350' => 'ghi', 'Gohir.A12G165500' => 'ghi', 'Gohir.A13G145700' => 'ghi', 'Gohir.D01G050000' => 'ghi', 'Gohir.D01G051366' => 'ghi', 'Gohir.D01G161350' => 'ghi', 'Gohir.D02G065900' => 'ghi', 'Gohir.D05G164200' => 'ghi', 'Gohir.D05G355500' => 'ghi', 'Gohir.D06G010400' => 'ghi', 'Gohir.D06G111250' => 'ghi', 'Gohir.D06G132000' => 'ghi', 'Gohir.D06G210500' => 'ghi', 'Gohir.D07G165675' => 'ghi', 'Gohir.D08G062240' => 'ghi', 'Gohir.D08G086101' => 'ghi', 'Gohir.D08G138060' => 'ghi', 'Gohir.D09G072300' => 'ghi', 'Gohir.D10G041400' => 'ghi', 'Gohir.D11G191020' => 'ghi', 'Gohir.D11G212066' => 'ghi', 'Gohir.D12G036300' => 'ghi', 'Gohir.D12G168600' => 'ghi', 'Gohir.D13G150600' => 'ghi', 'Gorai.001G057300' => 'gra', 'Gorai.002G069900' => 'gra', 'Gorai.002G200000' => 'gra', 'Gorai.003G067600' => 'gra', 'Gorai.005G074800' => 'gra', 'Gorai.006G087300' => 'gra', 'Gorai.008G037500' => 'gra', 'Gorai.008G181400' => 'gra', 'Gorai.009G169400' => 'gra', 'Gorai.009G387900' => 'gra', 'Gorai.010G013300' => 'gra', 'Gorai.010G153800' => 'gra', 'Gorai.010G255800' => 'gra', 'Gorai.011G043700' => 'gra', 'Gorai.011G198900' => 'gra', 'Gorai.013G168400' => 'gra', 'GSVIVG01005212001' => 'vvi', 'GSVIVG01006163001' => 'vvi', 'GSVIVG01009625001' => 'vvi', 'GSVIVG01014338001' => 'vvi', 'GSVIVG01020005001' => 'vvi', 'GSVIVG01021450001' => 'vvi', 'GSVIVG01023975001' => 'vvi', 'GSVIVG01034490001' => 'vvi', 'HanXRQChr04g0112071' => 'han', 'HanXRQChr05g0131151' => 'han', 'HanXRQChr09g0262371' => 'han', 'HanXRQChr09g0268401' => 'han', 'HanXRQChr10g0279241' => 'han', 'HanXRQChr10g0297961' => 'han', 'HanXRQChr11g0326231' => 'han', 'HanXRQChr11g0328471' => 'han', 'HanXRQChr16g0507941' => 'han', 'HanXRQChr17g0560211' => 'han', 'Haze_02108' => 'cav', 'Haze_02428' => 'cav', 'Haze_05593' => 'cav', 'Haze_06448' => 'cav', 'Haze_09427' => 'cav', 'Haze_12022' => 'cav', 'Haze_17612' => 'cav', 'Haze_17928' => 'cav', 'Hma1.2p1_0032F.1_g019250' => 'hma', 'Hma1.2p1_0163F.1_g072690' => 'hma', 'Hma1.2p1_0265F.1_g106710' => 'hma', 'Hma1.2p1_0286F.1_g113970' => 'hma', 'Hma1.2p1_0363F.1_g136640' => 'hma', 'Hma1.2p1_0584F.1_g183470' => 'hma', 'Hma1.2p1_0885F.1_g232570' => 'hma', 'HPP92_006022' => 'vpl', 'HPP92_007320' => 'vpl', 'HPP92_011521' => 'vpl', 'HPP92_019387' => 'vpl', 'HPP92_024038' => 'vpl', 'Hund05891' => 'sun', 'Hund06450' => 'sun', 'Hund12053' => 'sun', 'Hund16800' => 'sun', 'Hund21222' => 'sun', 'Hund22896' => 'sun', 'Hund23746' => 'sun', 'Hund27083' => 'sun', 'Lalb_Chr02g0141831' => 'lal', 'Lalb_Chr02g0141841' => 'lal', 'Lalb_Chr05g0220411' => 'lal', 'Lalb_Chr06g0162081' => 'lal', 'Lalb_Chr09g0327651' => 'lal', 'Lalb_Chr13g0295051' => 'lal', 'Lalb_Chr15g0086801' => 'lal', 'Lalb_Chr16g0383781' => 'lal', 'Lalb_Chr16g0383791' => 'lal', 'Lalb_Chr18g0055441' => 'lal', 'Lalb_Chr18g0059611' => 'lal', 'Lalb_Chr20g0109661' => 'lal', 'Lalb_Chr20g0109831' => 'lal', 'Lalb_Chr20g0121871' => 'lal', 'Lalb_Chr22g0355361' => 'lal', 'Lalb_Chr25g0286371' => 'lal', 'Lj1A1187G43' => 'lonja', 'Lj1A1205T50' => 'lonja', 'Lj1A800G33' => 'lonja', 'Lj1C1187T7' => 'lonja', 'Lj1C843T11' => 'lonja', 'Lj1g0010940' => 'lja', 'Lj2A288T69' => 'lonja', 'Lj3g0024276' => 'lja', 'Lj4A47T76' => 'lonja', 'Lj4g0005805' => 'lja', 'Lj4g0006097' => 'lja', 'Lj4g0008528' => 'lja', 'Lj4g0024907' => 'lja', 'Lj5g0012472' => 'lja', 'Lj5g0018648' => 'lja', 'Lj6C789G1' => 'lonja', 'Lj6g0004000' => 'lja', 'Lj7A292G67' => 'lonja', 'Lj7A292T64' => 'lonja', 'Lj9A400T58' => 'lonja', 'Lsat_1_v5_gn_1_126181' => 'lsa', 'Lsat_1_v5_gn_4_123041' => 'lsa', 'Lsat_1_v5_gn_4_133620' => 'lsa', 'Lsat_1_v5_gn_4_53221' => 'lsa', 'Lsat_1_v5_gn_4_71961' => 'lsa', 'Lsat_1_v5_gn_7_105241' => 'lsa', 'Lsat_1_v5_gn_7_21361' => 'lsa', 'Lsat_1_v5_gn_7_28860' => 'lsa', 'Lsat_1_v5_gn_7_31260' => 'lsa', 'Lsat_1_v5_gn_8_52801' => 'lsa', 'Manes.02G191400' => 'mes', 'Manes.03G110100' => 'mes', 'Manes.04G071100' => 'mes', 'Manes.05G100500' => 'mes', 'Manes.05G164700' => 'mes', 'Manes.15G087000' => 'mes', 'Manes.15G121500' => 'mes', 'Manes.16G028300' => 'mes', 'Manes.17G046100' => 'mes', 'Manes.17G069800' => 'mes', 'Manes.18G100500' => 'mes', 'Mapoly0002s0109' => 'mpo', 'Mapoly0024s0007' => 'mpo', 'Mapoly0089s0032' => 'mpo', 'MBI04_g42241_MAGBIO' => 'mbi', 'MBI05_g11988_MAGBIO' => 'mbi', 'MBI05_g35452_MAGBIO' => 'mbi', 'MBI07_g30179_MAGBIO' => 'mbi', 'MBI07_g35859_MAGBIO' => 'mbi', 'MBI07_g35860_MAGBIO' => 'mbi', 'MBI07_g37166_MAGBIO' => 'mbi', 'MBI08_g18172_MAGBIO' => 'mbi', 'MBI09_g08441_MAGBIO' => 'mbi', 'MBI13_g01676_MAGBIO' => 'mbi', 'MBI14_g42955_MAGBIO' => 'mbi', 'MBI16_g13161_MAGBIO' => 'mbi', 'MBI17_g27204_MAGBIO' => 'mbi', 'MBI19_g21595_MAGBIO' => 'mbi', 'MD00G1148400' => 'mdo', 'MD02G1301200' => 'mdo', 'MD03G1227800' => 'mdo', 'MD05G1041100' => 'mdo', 'MD05G1124800' => 'mdo', 'MD05G1284000' => 'mdo', 'MD05G1338800' => 'mdo', 'MD05G1338900' => 'mdo', 'MD07G1022800' => 'mdo', 'MD10G1047500' => 'mdo', 'MD10G1127500' => 'mdo', 'MD10G1262300' => 'mdo', 'MD10G1293800' => 'mdo', 'MD16G1074300' => 'mdo', 'Medtr1g021670' => 'mtr', 'Medtr1g096320' => 'mtr', 'Medtr2g013690' => 'mtr', 'Medtr2g019450' => 'mtr', 'Medtr2g085170' => 'mtr', 'Medtr4g088785' => 'mtr', 'Medtr8g055930' => 'mtr', 'Medtr8g085850' => 'mtr', 'MELO3C002605.2' => 'cme', 'MELO3C003891.2' => 'cme', 'MELO3C004012.2' => 'cme', 'MELO3C007134.2' => 'cme', 'MELO3C008118.2' => 'cme', 'MELO3C016700.2' => 'cme', 'MELO3C024127.2' => 'cme', 'MELO3C033361.2' => 'cme', 'MELO3C033362.2' => 'cme', 'Migut.C00430' => 'egut', 'Migut.C01246' => 'egut', 'Migut.E00101' => 'egut', 'Migut.H01486' => 'egut', 'Migut.H01939' => 'egut', 'Migut.K00360' => 'egut', 'Migut.M00910' => 'egut', 'Migut.M01139' => 'egut', 'Migut.N02677' => 'egut', 'MSTRG.13252' => 'ama', 'MSTRG.14701' => 'ama', 'MSTRG.1521' => 'ama', 'MSTRG.15884' => 'ama', 'MSTRG.16242' => 'ama', 'MSTRG.22285' => 'ama', 'MSTRG.22444' => 'ama', 'MSTRG.2349' => 'ama', 'MSTRG.26308' => 'ama', 'MSTRG.28296' => 'ama', 'MSTRG.9895' => 'ama', 'Nitab4.5_0000110g0060' => 'nta', 'Nitab4.5_0000420g0130' => 'nta', 'Nitab4.5_0000422g0030' => 'nta', 'Nitab4.5_0000560g0180' => 'nta', 'Nitab4.5_0000703g0100' => 'nta', 'Nitab4.5_0000786g0200' => 'nta', 'Nitab4.5_0001336g0020' => 'nta', 'Nitab4.5_0001796g0030' => 'nta', 'Nitab4.5_0003348g0060' => 'nta', 'Nitab4.5_0003698g0040' => 'nta', 'Nitab4.5_0003942g0090' => 'nta', 'Nitab4.5_0004775g0070' => 'nta', 'Nitab4.5_0004864g0030' => 'nta', 'Nitab4.5_0005615g0020' => 'nta', 'Nitab4.5_0009288g0030' => 'nta', 'Nitab4.5_0009341g0010' => 'nta', 'Nitab4.5_0009535g0010' => 'nta', 'Nn1g03995' => 'nnu', 'Nn1g04100' => 'nnu', 'Nn1g06530' => 'nnu', 'Nn3g16404' => 'nnu', 'Nn3g17212' => 'nnu', 'Nn3g20776' => 'nnu', 'Nn3g21923' => 'nnu', 'Nn5g27737' => 'nnu', 'Nn5g29461' => 'nnu', 'Nn7g38355' => 'nnu', 'Nn8g39873' => 'nnu', 'Oeu000548.2' => 'oeu', 'Oeu004672.1' => 'oeu', 'Oeu015605.2' => 'oeu', 'Oeu016092.1' => 'oeu', 'Oeu017879.3' => 'oeu', 'Oeu024910.1' => 'oeu', 'Oeu028965.1' => 'oeu', 'Oeu031269.1' => 'oeu', 'Oeu031270.1' => 'oeu', 'Oeu032535.1' => 'oeu', 'Oeu034151.1' => 'oeu', 'Oeu034152.1' => 'oeu', 'Oeu034588.2' => 'oeu', 'Oeu050846.1' => 'oeu', 'Oeu050849.2' => 'oeu', 'Oeu051063.2' => 'oeu', 'Oeu052368.1' => 'oeu', 'Oeu052370.1' => 'oeu', 'Os01g0210400' => 'osa', 'Os01g0304300' => 'osa', 'Os01g0749100' => 'osa', 'Os02g0745800' => 'osa', 'Os03g0769050' => 'osa', 'Os05g0531500' => 'osa', 'Os06g0724300' => 'osa', 'Os11g0198100' => 'osa', 'Peaxi162Scf00069g01425' => 'pax', 'Peaxi162Scf00280g00811' => 'pax', 'Peaxi162Scf00310g00615' => 'pax', 'Peaxi162Scf00362g00542' => 'pax', 'Peaxi162Scf00461g00310' => 'pax', 'Peaxi162Scf00530g00118' => 'pax', 'Peaxi162Scf00541g00057' => 'pax', 'Peaxi162Scf00661g00017' => 'pax', 'Peaxi162Scf00926g00027' => 'pax', 'Peaxi162Scf01064g00263' => 'pax', 'Peaxi162Scf01211g00135' => 'pax', 'PGR004G2336' => 'pgr', 'PGR042G0327' => 'pgr', 'PGR042G1957' => 'pgr', 'PGR042G2003' => 'pgr', 'PGR042G3929' => 'pgr', 'PGR083G1137' => 'pgr', 'PGR083G1364' => 'pgr', 'PGSC0003DMG400003381' => 'stu', 'PGSC0003DMG400003417' => 'stu', 'PGSC0003DMG400008981' => 'stu', 'PGSC0003DMG400012417' => 'stu', 'PGSC0003DMG400012823' => 'stu', 'PGSC0003DMG400016885' => 'stu', 'PGSC0003DMG400022812' => 'stu', 'PGSC0003DMG400029726' => 'stu', 'PGSC0003DMG401009243' => 'stu', 'PGSC0003DMG401031505' => 'stu', 'PGSC0003DMG402031505' => 'stu', 'Phvul.001G017600' => 'pvu', 'Phvul.002G193500' => 'pvu', 'Phvul.002G228900' => 'pvu', 'Phvul.002G236800' => 'pvu', 'Phvul.003G049500' => 'pvu', 'Phvul.005G072000' => 'pvu', 'Phvul.006G164800' => 'pvu', 'Phvul.006G185100' => 'pvu', 'Phvul.007G090000' => 'pvu', 'Potri.001G399800' => 'ptr', 'Potri.002G149900' => 'ptr', 'Potri.004G044100' => 'ptr', 'Potri.004G177600' => 'ptr', 'Potri.009G138000' => 'ptr', 'Potri.010G094000' => 'ptr', 'Potri.011G053000' => 'ptr', 'Potri.011G119300' => 'ptr', 'Potri.013G113700' => 'ptr', 'Potri.018G107800' => 'ptr', 'Potri.019G084100' => 'ptr', 'Pp3c14_23720' => 'ppa', 'Pp3c16_6340' => 'ppa', 'Pp3c23_13420' => 'ppa', 'Pp3c24_2740' => 'ppa', 'Pp3c25_860' => 'ppa', 'Pp3c8_21750' => 'ppa', 'Prupe.1G273000' => 'ppe', 'Prupe.1G273700' => 'ppe', 'Prupe.1G274100' => 'ppe', 'Prupe.2G023300' => 'ppe', 'Prupe.4G048000' => 'ppe', 'Prupe.4G080400' => 'ppe', 'Prupe.4G181200' => 'ppe', 'Prupe.8G056900' => 'ppe', 'Prupe.8G168700' => 'ppe', 'Psat1g189080' => 'psa', 'Psat1g204760' => 'psa', 'Psat4g175560' => 'psa', 'Psat4g177720' => 'psa', 'Psat5g244240' => 'psa', 'Psat6g010720' => 'psa', 'Psat6g187200' => 'psa', 'Psat7g072040' => 'psa', 'PSO017G3501' => 'pso', 'PSO063G2148' => 'pso', 'PSO063G5608' => 'pso', 'PSO210G6392' => 'pso', 'PSO541G2319' => 'pso', 'PSO541G2836' => 'pso', 'PSO541G4012' => 'pso', 'PSO541G6253' => 'pso', 'PSO675G0580' => 'pso', 'PSO675G0856' => 'pso', 'PSO675G5635' => 'pso', 'PSO675G9157' => 'pso', 'PSO832G1660' => 'pso', 'PSO832G1969' => 'pso', 'QL02p007186' => 'qlo', 'QL02p033904' => 'qlo', 'QL03p064391' => 'qlo', 'QL05p040593' => 'qlo', 'QL05p058242' => 'qlo', 'QL08p021825' => 'qlo', 'QL11p004981' => 'qlo', 'RcHm_v2.0_Chr1g0318301' => 'rch', 'RcHm_v2.0_Chr4g0418501' => 'rch', 'RcHm_v2.0_Chr4g0439971' => 'rch', 'RcHm_v2.0_Chr5g0008541' => 'rch', 'RcHm_v2.0_Chr5g0014101' => 'rch', 'RcHm_v2.0_Chr5g0014131' => 'rch', 'RcHm_v2.0_Chr5g0033621' => 'rch', 'RcHm_v2.0_Chr6g0272041' => 'rch', 'RcHm_v2.0_Chr6g0278831' => 'rch', 'Rhsim02G0130400' => 'rsi', 'Rhsim02G0171100' => 'rsi', 'Rhsim05G0053000' => 'rsi', 'Rhsim05G0053100' => 'rsi', 'Rhsim06G0096500' => 'rsi', 'Rhsim06G0096600' => 'rsi', 'Rhsim06G0199100' => 'rsi', 'Rhsim12G0062300' => 'rsi', 'Rhsim12G0062800' => 'rsi', 'Sabra02G0118600' => 'sbr', 'Sabra04G0027300' => 'sbr', 'Sabra04G0119500' => 'sbr', 'Sabra08G0112500' => 'sbr', 'Sabra11G0036800' => 'sbr', 'Sabra11G0103800' => 'sbr', 'Sabra13G0096300' => 'sbr', 'Sabra16G0262300' => 'sbr', 'Sabra18G0091700' => 'sbr', 'Sabra19G0095400' => 'sbr', 'SalBow6G3080' => 'sbo', 'SalBow7G1157' => 'sbo', 'SalBow7G2123' => 'sbo', 'SalBow7G2285' => 'sbo', 'SalBow7G3537' => 'sbo', 'SalBow8G2947' => 'sbo', 'SalBow8G4463' => 'sbo', 'SalBow8G5466' => 'sbo', 'Sc01g0001750' => 'sci', 'Sc02g0006640' => 'sci', 'Sc02g0006670' => 'sci', 'Sc04g0008220' => 'sci', 'Sc05g0006190' => 'sci', 'Sc08g0002760' => 'sci', 'Sc17g0006170' => 'sci', 'Sc22g0002050' => 'sci', 'Sc23g0001190' => 'sci', 'Sc24g0000980' => 'sci', 'Sed0006245' => 'sed', 'Sed0007543' => 'sed', 'Sed0009411' => 'sed', 'Sed0010765' => 'sed', 'Sed0012944' => 'sed', 'Sed0014682' => 'sed', 'Sed0016174' => 'sed', 'Sed0016796' => 'sed', 'Sed0020317' => 'sed', 'Sed0021467' => 'sed', 'SEGI_01316' => 'sgi', 'SEGI_03374' => 'sgi', 'SEGI_16265' => 'sgi', 'SEGI_18569' => 'sgi', 'SEGI_20351' => 'sgi', 'SEGI_26395' => 'sgi', 'SEGI_29469' => 'sgi', 'SEGI_34771' => 'sgi', 'SEGI_36769' => 'sgi', 'SEGI_37139' => 'sgi', 'SGA_v2.0_scaffold100G29687' => 'sas', 'SGA_v2.0_scaffold118G32472' => 'sas', 'SGA_v2.0_scaffold14G07051' => 'sas', 'SGA_v2.0_scaffold183G39845' => 'sas', 'SGA_v2.0_scaffold1G00174' => 'sas', 'SGA_v2.0_scaffold22G09714' => 'sas', 'SGA_v2.0_scaffold333G48992' => 'sas', 'SGA_v2.0_scaffold46G17491' => 'sas', 'SGA_v2.0_scaffold49G18294' => 'sas', 'SGA_v2.0_scaffold63G21658' => 'sas', 'SHI01741' => 'shi', 'SHI05771' => 'shi', 'SHI18077' => 'shi', 'SHI20525' => 'shi', 'SHI20527' => 'shi', 'SHI20528' => 'shi', 'SMO172G0185' => 'smo', 'SMO198G0020' => 'smo', 'SMO351G0006' => 'smo', 'SMO356G0118' => 'smo', 'SMO358G0296' => 'smo', 'SMO367G0079' => 'smo', 'SMO367G1277' => 'smo', 'Solyc01g014220.3' => 'sly', 'Solyc01g111770.2' => 'sly', 'Solyc02g078180.3' => 'sly', 'Solyc03g006430.3' => 'sly', 'Solyc03g006456.1' => 'sly', 'Solyc03g079860.2' => 'sly', 'Solyc04g079770.3' => 'sly', 'Solyc05g007430.4' => 'sly', 'Solyc07g063150.3' => 'sly', 'Solyc08g016620.3' => 'sly', 'Solyc09g057590.3' => 'sly', 'Solyc09g057600.1' => 'sly', 'Solyc10g009050.3' => 'sly', 'Solyc11g017420.2' => 'sly', 'Sopen01g053810' => 'spe', 'Sopen02g023040' => 'spe', 'Sopen03g002440' => 'spe', 'Sopen04g033350' => 'spe', 'Sopen05g003310' => 'spe', 'Sopen07g004050' => 'spe', 'Sopen07g031340' => 'spe', 'Sopen08g006990' => 'spe', 'Sopen10g004830' => 'spe', 'Sopen11g009370' => 'spe', 'Sp1g24450' => 'spa', 'Sp1g29670' => 'spa', 'Sp1g39600' => 'spa', 'Sp2g11080' => 'spa', 'Sp2g13970' => 'spa', 'Sp4g16130' => 'spa', 'Sp6g13080' => 'spa', 'Sp7g37270' => 'spa', 'TAR371G0065' => 'tar', 'TAR376G0340' => 'tar', 'TAR376G0435' => 'tar', 'TAR381G0002' => 'tar', 'TAR381G1236' => 'tar', 'TAR624G0055' => 'tar', 'TAR624G0324' => 'tar', 'TAR624G0696' => 'tar', 'TAR624G0906' => 'tar', 'TAR625G0107' => 'tar', 'TAR626G0015' => 'tar', 'TAR626G1356' => 'tar', 'TAR627G0888' => 'tar', 'TAR628G0399' => 'tar', 'TAR628G1327' => 'tar', 'TAR629G2831' => 'tar', 'TAR629G2874' => 'tar', 'TAR633G1432' => 'tar', 'TAR633G2771' => 'tar', 'THA.LOC104803394' => 'tha', 'THA.LOC104805153' => 'tha', 'THA.LOC104806784' => 'tha', 'THA.LOC104810473' => 'tha', 'THA.LOC104813100' => 'tha', 'THA.LOC104814215' => 'tha', 'THA.LOC104815554' => 'tha', 'THA.LOC104820544' => 'tha', 'THA.LOC104824754' => 'tha', 'THA.LOC104827717' => 'tha', 'Thecc.02G031400' => 'tca', 'Thecc.02G055900' => 'tca', 'Thecc.02G350800' => 'tca', 'Thecc.06G150900' => 'tca', 'Thecc.06G186600' => 'tca', 'Thecc.07G089600' => 'tca', 'Thecc.08G020400' => 'tca', 'Thecc.08G182100' => 'tca', 'Thhalv10000873m.g' => 'esa', 'Thhalv10004185m.g' => 'esa', 'Thhalv10006981m.g' => 'esa', 'Thhalv10007204m.g' => 'esa', 'Thhalv10011374m.g' => 'esa', 'Thhalv10013482m.g' => 'esa', 'Thhalv10017801m.g' => 'esa', 'Thhalv10024983m.g' => 'esa', 'TPR.G12072' => 'tpr', 'TPR.G15769' => 'tpr', 'TPR.G16504' => 'tpr', 'TPR.G16506' => 'tpr', 'TPR.G24345' => 'tpr', 'TPR.G26666' => 'tpr', 'TPR.G27320' => 'tpr', 'TPR.G31819' => 'tpr', 'TPR.G38879' => 'tpr', 'TPR.G39015' => 'tpr', 'TPR.G8819' => 'tpr', 'TWI09G0924' => 'twi', 'TWI12G0811' => 'twi', 'TWI12G1294' => 'twi', 'TWI31G0150' => 'twi', 'TWI36G1262' => 'twi', 'TWI38G1287' => 'twi', 'TWI38G1633' => 'twi', 'TWI38G1982' => 'twi', 'TWI39G0116' => 'twi', 'TWI60G1011' => 'twi', 'TWI63G0171' => 'twi', 'TWI73G0839' => 'twi', 'TWI79G1511' => 'twi', 'unitig_0.g915' => 'ugi', 'unitig_0.g916' => 'ugi', 'unitig_21.g20219' => 'ugi', 'unitig_21.g20416' => 'ugi', 'unitig_578.g16132' => 'ugi', 'unitig_578.g16718' => 'ugi', 'unitig_62.g23481' => 'ugi', 'unitig_744.g24535' => 'ugi', 'unitig_749.g13525' => 'ugi', 'vmacro01248' => 'vma', 'vmacro02290' => 'vma', 'vmacro10946' => 'vma', 'vmacro11865' => 'vma', 'vmacro12493' => 'vma', 'vmacro17322' => 'vma', 'vmacro21599' => 'vma', 'vmacro23041' => 'vma', 'VMungo0251G0004' => 'vmu', 'VMungo0251G2639' => 'vmu', 'VMungo0251G2967' => 'vmu', 'VMungo0540G0864' => 'vmu', 'VMungo0540G1569' => 'vmu', 'VMungo0647G0317' => 'vmu', 'VMungo0720G1373' => 'vmu', 'VMungo0720G1508' => 'vmu', 'VMungo1080G0485' => 'vmu', 'VMungo1215G3177' => 'vmu', 'Zm00001eb112600' => 'zma', 'Zm00001eb120220' => 'zma', 'Zm00001eb153240' => 'zma', 'Zm00001eb168880' => 'zma', 'Zm00001eb213920' => 'zma', 'Zm00001eb228280' => 'zma', 'Zm00001eb254580' => 'zma', 'Zm00001eb272180' => 'zma', 'Zm00001eb293190' => 'zma', 'Zm00001eb322930' => 'zma', 'Zm00001eb353360' => 'zma', 'Zm00001eb353390' => 'zma', 'Zm00001eb353430' => 'zma', 'Zm00001eb353440' => 'zma', 'Zm00001eb353780' => 'zma' ) $gf_id = 'HOM05D000499' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000499' ) $data_identifier = 'HOM05D000499' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 29, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 12, 'amhyb' => (int) 8, 'aly' => (int) 12, 'aox' => (int) 9, 'arhy' => (int) 26, 'ath' => (int) 8, 'atr' => (int) 7, 'acertr' => (int) 10, 'cqu' => (int) 15, 'bca' => (int) 29, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 11, 'cansat' => (int) 8, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 9, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 8, 'cpa' => (int) 10, 'csa' => (int) 7, 'camsi' => (int) 20, 'dca' => (int) 8, 'din' => (int) 12, 'dzi' => (int) 14, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 6, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 38, 'gra' => (int) 16, 'vvi' => (int) 8, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 5, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 11, 'lja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 11, 'mpo' => (int) 3, 'mbi' => (int) 14, 'mdo' => (int) 14, 'mtr' => (int) 8, 'cme' => (int) 9, 'egut' => (int) 9, 'ama' => (int) 11, 'nta' => (int) 17, 'nnu' => (int) 11, 'oeu' => (int) 18, 'osa' => (int) 8, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 6, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 9, 'rsi' => (int) 9, 'sbr' => (int) 10, 'sbo' => (int) 8, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 10, 'sas' => (int) 10, 'shi' => (int) 6, 'smo' => (int) 7, 'sly' => (int) 14, 'spe' => (int) 10, 'spa' => (int) 8, 'tar' => (int) 19, 'tha' => (int) 10, 'tca' => (int) 8, 'esa' => (int) 8, 'tpr' => (int) 11, 'twi' => (int) 13, 'ugi' => (int) 9, 'vma' => (int) 8, 'vmu' => (int) 10, 'zma' => (int) 15 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb353780' $species_info = array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ) $local_species = 'mes' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000499', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1066', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p29780' => 'bna', 'A02p33180' => 'bna', 'A03p16470' => 'bna', 'A03p66010' => 'bna', 'A04p25970' => 'bna', 'A06p01270' => 'bna', 'A06p46080' => 'bna', 'A07p11400' => 'bna', 'A08p01840' => 'bna', 'A08p08230' => 'bna', 'A08p25740' => 'bna', 'A09p32070' => 'bna', 'A09p37830' => 'bna', 'A09p42840' => 'bna', 'A09p42850' => 'bna', 'Aa31LG10G2060' => 'aar', 'Aa31LG2G7410' => 'aar', 'Aa31LG6G10200' => 'aar', 'Aa31LG6G16680' => 'aar', 'Aa31LG6G8470' => 'aar', 'Aa31LG9G12730' => 'aar', 'Aa31LG9G13680' => 'aar', 'Aa31LG9G14920' => 'aar', 'Aa31LG9G6650' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4977' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5467' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3254' => 'aag', 'Actinidia02578' => 'ach', 'Actinidia07693' => 'ach', 'Actinidia08413' => 'ach', 'Actinidia08414' => 'ach', 'Actinidia15289' => 'ach', 'Actinidia19871' => 'ach', 'Actinidia21475' => 'ach', 'Actinidia22576' => 'ach', 'Actinidia28327' => 'ach', 'Actinidia32491' => 'ach', 'Actinidia39463' => 'ach', 'Actinidia39571' => 'ach', 'Ah.01g013750' => 'amhyb', 'Ah.01g023210' => 'amhyb', 'Ah.04g164850' => 'amhyb', 'Ah.05g178060' => 'amhyb', 'Ah.07g204270' => 'amhyb', 'Ah.07g208480' => 'amhyb', 'Ah.09g237410' => 'amhyb', 'Ah.14g089460' => 'amhyb', 'AL1G41790' => 'aly', 'AL1G49050' => 'aly', 'AL1G53810' => 'aly', 'AL1G61400' => 'aly', 'AL4G18580' => 'aly', 'AL5G12510' => 'aly', 'AL5G12540' => 'aly', 'AL6G43230' => 'aly', 'AL7G10370' => 'aly', 'AL7G19250' => 'aly', 'AL8G12240' => 'aly', 'AL8G18540' => 'aly', 'Aqoxy1G02409' => 'aox', 'Aqoxy2G03993' => 'aox', 'Aqoxy3G03357' => 'aox', 'Aqoxy4G00785' => 'aox', 'Aqoxy5G02598' => 'aox', 'Aqoxy6G00132' => 'aox', 'Aqoxy7G01776' => 'aox', 'Aqoxy7G02316' => 'aox', 'Aqoxy7G03973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.12AFKW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B8730' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27IQR1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3F75VG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3RE0GA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41TCQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.527VTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FIR39' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5W8UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DA38EV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ63HS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H1I32C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HC27T5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4M8AP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7N3CZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9UVDZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LS1NQA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT1D4B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SKC4TM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCFV76' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF9Q1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQWD9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1ZM88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WE07RT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YCK7VH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJE6Q6' => 'arhy', 'AT1G28240' => 'ath', 'AT1G34550' => 'ath', 'AT1G53040' => 'ath', 'AT2G02910' => 'ath', 'AT4G09630' => 'ath', 'AT4G38500' => 'ath', 'AT5G42660' => 'ath', 'AT5G46220' => 'ath', 'ATR0152G026' => 'atr', 'ATR0564G343' => 'atr', 'ATR0706G151' => 'atr', 'ATR0733G207' => 'atr', 'ATR0751G234' => 'atr', 'ATR0807G048' => 'atr', 'ATR1091G084' => 'atr', 'Atru.chr10.1229' => 'acertr', 'Atru.chr10.1230' => 'acertr', 'Atru.chr10.1874' => 'acertr', 'Atru.chr11.1808' => 'acertr', 'Atru.chr13.1795' => 'acertr', 'Atru.chr13.570' => 'acertr', 'Atru.chr2.2608' => 'acertr', 'Atru.chr2.2609' => 'acertr', 'Atru.chr5.3428' => 'acertr', 'Atru.chr8.1171' => 'acertr', 'AUR62004651' => 'cqu', 'AUR62008675' => 'cqu', 'AUR62010014' => 'cqu', 'AUR62013004' => 'cqu', 'AUR62014825' => 'cqu', 'AUR62015015' => 'cqu', 'AUR62015151' => 'cqu', 'AUR62017020' => 'cqu', 'AUR62019422' => 'cqu', 'AUR62023570' => 'cqu', 'AUR62025571' => 'cqu', 'AUR62029098' => 'cqu', 'AUR62033863' => 'cqu', 'AUR62034296' => 'cqu', 'AUR62040075' => 'cqu', 'BcaB02g07334' => 'bca', 'BcaB02g10575' => 'bca', 'BcaB03g12119' => 'bca', 'BcaB03g12120' => 'bca', 'BcaB03g13945' => 'bca', 'BcaB04g17123' => 'bca', 'BcaB04g17867' => 'bca', 'BcaB04g19839' => 'bca', 'BcaB07g30317' => 'bca', 'BcaB07g32432' => 'bca', 'BcaB07g33362' => 'bca', 'BcaB08g36611' => 'bca', 'BcaC01g00028' => 'bca', 'BcaC01g01356' => 'bca', 'BcaC01g02034' => 'bca', 'BcaC01g06051' => 'bca', 'BcaC03g16839' => 'bca', 'BcaC03g17176' => 'bca', 'BcaC05g26829' => 'bca', 'BcaC06g31490' => 'bca', 'BcaC06g35344' => 'bca', 'BcaC06g36570' => 'bca', 'BcaC07g37537' => 'bca', 'BcaC08g43491' => 'bca', 'BcaC08g43773' => 'bca', 'BcaNung00234' => 'bca', 'BcaNung01982' => 'bca', 'BcaNung03707' => 'bca', 'BcaNung06454' => 'bca', 'BolC2t10762H' => 'bol', 'BolC2t11191H' => 'bol', 'BolC3t14322H' => 'bol', 'BolC3t19747H' => 'bol', 'BolC3t21425H' => 'bol', 'BolC4t27800H' => 'bol', 'BolC5t31423H' => 'bol', 'BolC6t35951H' => 'bol', 'BolC6t36282H' => 'bol', 'BolC7t40678H' => 'bol', 'BolC7t40679H' => 'bol', 'BolC7t42222H' => 'bol', 'BolC7t43492H' => 'bol', 'BolC7t46785H' => 'bol', 'BolC8t47853H' => 'bol', 'BolC9t56805H' => 'bol', 'BraA02t08000Z' => 'bra', 'BraA02t08341Z' => 'bra', 'BraA03t10936Z' => 'bra', 'BraA03t15657Z' => 'bra', 'BraA04t18100Z' => 'bra', 'BraA05t20523Z' => 'bra', 'BraA06t23353Z' => 'bra', 'BraA06t27473Z' => 'bra', 'BraA06t27769Z' => 'bra', 'BraA07t28928Z' => 'bra', 'BraA08t32236Z' => 'bra', 'BraA08t32841Z' => 'bra', 'BraA08t34524Z' => 'bra', 'BraA09t38742Z' => 'bra', 'BraA09t39295Z' => 'bra', 'C02p47180' => 'bna', 'C02p50990' => 'bna', 'C03p19360' => 'bna', 'C03p74950' => 'bna', 'C03p91000' => 'bna', 'C04p63260' => 'bna', 'C05p27050' => 'bna', 'C06p08750' => 'bna', 'C06p11490' => 'bna', 'C07p02820' => 'bna', 'C07p17180' => 'bna', 'C07p29440' => 'bna', 'C07p63730' => 'bna', 'C09p39260' => 'bna', 'CAN.G1164.34' => 'can', 'CAN.G1164.39' => 'can', 'CAN.G1530.3' => 'can', 'CAN.G162.61' => 'can', 'CAN.G176.6' => 'can', 'CAN.G289.49' => 'can', 'CAN.G370.21' => 'can', 'CAN.G370.22' => 'can', 'CAN.G371.117' => 'can', 'CAN.G58.37' => 'can', 'CAN.G588.98' => 'can', 'CANSAT21G2266' => 'cansat', 'CANSAT25G2799' => 'cansat', 'CANSAT35G0862' => 'cansat', 'CANSAT35G1704' => 'cansat', 'CANSAT35G1760' => 'cansat', 'CANSAT56G3971' => 'cansat', 'CANSAT56G4116' => 'cansat', 'CANSAT80G1259' => 'cansat', 'CARHR027730' => 'chi', 'CARHR033880' => 'chi', 'CARHR043270' => 'chi', 'CARHR145330' => 'chi', 'CARHR145340' => 'chi', 'CARHR175570' => 'chi', 'CARHR181570' => 'chi', 'CARHR258470' => 'chi', 'CARHR260490' => 'chi', 'CARHR294220' => 'chi', 'Carub.0001s2668' => 'cru', 'Carub.0001s3257' => 'cru', 'Carub.0001s4220' => 'cru', 'Carub.0005s0179' => 'cru', 'Carub.0006s2807' => 'cru', 'Carub.0007s0039' => 'cru', 'Carub.0008s0169' => 'cru', 'Carub.0008s0636' => 'cru', 'Ca_00338_v3' => 'car', 'Ca_00542_v3' => 'car', 'Ca_01844_v3' => 'car', 'Ca_10611_v3' => 'car', 'Ca_13326_v3' => 'car', 'Ca_17944_v3' => 'car', 'Ca_18546_v3' => 'car', 'Ca_24219_v3' => 'car', 'Ca_29972_v3' => 'car', 'CBR_g3681' => 'cbr', 'CBR_g40021' => 'cbr', 'Cc01_g08140' => 'ccan', 'Cc02_g13410' => 'ccan', 'Cc02_g37480' => 'ccan', 'Cc05_g12030' => 'ccan', 'Cc09_g03370' => 'ccan', 'Cc09_g10300' => 'ccan', 'Cc10_g03530' => 'ccan', 'Cc10_g11380' => 'ccan', 'CDE01G0176' => 'cde', 'CDE02G0675' => 'cde', 'CDE02G0942' => 'cde', 'CDE02G1153' => 'cde', 'CDE02G4177' => 'cde', 'CDE04G2117' => 'cde', 'CDE04G2736' => 'cde', 'CDE08G1161' => 'cde', 'CDE09G1238' => 'cde', 'Cfa000467' => 'cfa', 'Cfa000947' => 'cfa', 'Cfa004969' => 'cfa', 'Cfa005284' => 'cfa', 'Cfa008993' => 'cfa', 'Cfa018187' => 'cfa', 'Cfa018454' => 'cfa', 'Cfa020585' => 'cfa', 'Ciclev10000424m.g' => 'ccl', 'Ciclev10003605m.g' => 'ccl', 'Ciclev10007828m.g' => 'ccl', 'Ciclev10014620m.g' => 'ccl', 'Ciclev10015169m.g' => 'ccl', 'Ciclev10018291m.g' => 'ccl', 'Ciclev10028256m.g' => 'ccl', 'Ciclev10033822m.g' => 'ccl', 'CiPaw.05G060300' => 'cil', 'CiPaw.05G085000' => 'cil', 'CiPaw.06G083700' => 'cil', 'CiPaw.06G120300' => 'cil', 'CiPaw.09G060500' => 'cil', 'CiPaw.09G123800' => 'cil', 'CiPaw.11G169700' => 'cil', 'CiPaw.12G118300' => 'cil', 'CiPaw.15G071000' => 'cil', 'CiPaw.15G081900' => 'cil', 'ClCG01G024610' => 'cla', 'ClCG03G006070' => 'cla', 'ClCG05G019250' => 'cla', 'ClCG09G009500' => 'cla', 'ClCG11G008200' => 'cla', 'ClCG11G018080' => 'cla', 'COL.COLO4_17373' => 'col', 'COL.COLO4_22994' => 'col', 'COL.COLO4_26389' => 'col', 'COL.COLO4_27170' => 'col', 'COL.COLO4_31074' => 'col', 'COL.COLO4_31465' => 'col', 'COL.COLO4_36438' => 'col', 'COL.COLO4_36439' => 'col', 'Cpa.g.c38781' => 'cpa', 'Cpa.g.sc128.12' => 'cpa', 'Cpa.g.sc166.7' => 'cpa', 'Cpa.g.sc166.8' => 'cpa', 'Cpa.g.sc20.111' => 'cpa', 'Cpa.g.sc27.31' => 'cpa', 'Cpa.g.sc64.36' => 'cpa', 'Cpa.g.sc64.37' => 'cpa', 'Cpa.g.sc66.49' => 'cpa', 'Cpa.g.sc80.64' => 'cpa', 'CsaV3_1G012320' => 'csa', 'CsaV3_2G008480' => 'csa', 'CsaV3_2G033450' => 'csa', 'CsaV3_3G044830' => 'csa', 'CsaV3_4G033710' => 'csa', 'CsaV3_6G051730' => 'csa', 'CsaV3_7G025350' => 'csa', 'CSS0001067' => 'camsi', 'CSS0005996' => 'camsi', 'CSS0006590' => 'camsi', 'CSS0009673' => 'camsi', 'CSS0010201' => 'camsi', 'CSS0010549' => 'camsi', 'CSS0011364' => 'camsi', 'CSS0014473' => 'camsi', 'CSS0014961' => 'camsi', 'CSS0020191' => 'camsi', 'CSS0021165' => 'camsi', 'CSS0022306' => 'camsi', 'CSS0030591' => 'camsi', 'CSS0030696' => 'camsi', 'CSS0032653' => 'camsi', 'CSS0037487' => 'camsi', 'CSS0041102' => 'camsi', 'CSS0041261' => 'camsi', 'CSS0046246' => 'camsi', 'CSS0049256' => 'camsi', 'DCAR_004075' => 'dca', 'DCAR_011538' => 'dca', 'DCAR_019553' => 'dca', 'DCAR_020952' => 'dca', 'DCAR_021739' => 'dca', 'DCAR_027407' => 'dca', 'DCAR_027913' => 'dca', 'DCAR_028066' => 'dca', 'Dinv05899' => 'din', 'Dinv07563' => 'din', 'Dinv08010' => 'din', 'Dinv14125' => 'din', 'Dinv20172' => 'din', 'Dinv30743' => 'din', 'Dinv31229' => 'din', 'Dinv34162' => 'din', 'Dinv36028' => 'din', 'Dinv39368' => 'din', 'Dinv40565' => 'din', 'Dinv41706' => 'din', 'Duzib052G0089' => 'dzi', 'Duzib116G0641' => 'dzi', 'Duzib132G0069' => 'dzi', 'Duzib132G1219' => 'dzi', 'Duzib147G0278' => 'dzi', 'Duzib160G0480' => 'dzi', 'Duzib170G0661' => 'dzi', 'Duzib177G0591' => 'dzi', 'Duzib187G1353' => 'dzi', 'Duzib192G0858' => 'dzi', 'Duzib192G0883' => 'dzi', 'Duzib213G0506' => 'dzi', 'Duzib235G0289' => 'dzi', 'Duzib251G0422' => 'dzi', 'ECA232G3898' => 'eca', 'ECA233G5950' => 'eca', 'ECA234G1699' => 'eca', 'ECA234G2421' => 'eca', 'ECA236G0426' => 'eca', 'ECA236G4331' => 'eca', 'ECA248G2573' => 'eca', 'EL10Ac1g00077' => 'bvu', 'EL10Ac1g01746' => 'bvu', 'EL10Ac2g03464' => 'bvu', 'EL10Ac4g08176' => 'bvu', 'EL10Ac7g17521' => 'bvu', 'EL10Ac8g20386' => 'bvu', 'EL10Ac9g21343' => 'bvu', 'EL10Ac9g22688' => 'bvu', 'Eucgr.B03434' => 'egr', 'Eucgr.D00618' => 'egr', 'Eucgr.E02395' => 'egr', 'Eucgr.F01129' => 'egr', 'Eucgr.F02622' => 'egr', 'Eucgr.F04207' => 'egr', 'FAN01G0570' => 'fan', 'FAN03G3351' => 'fan', 'FAN06G3702' => 'fan', 'FAN07G2149' => 'fan', 'FAN10G3758' => 'fan', 'FAN11G1170' => 'fan', 'FAN11G2050' => 'fan', 'FAN11G2724' => 'fan', 'FAN12G1700' => 'fan', 'FAN12G2028' => 'fan', 'FAN15G1160' => 'fan', 'FAN15G3063' => 'fan', 'FAN16G2540' => 'fan', 'FAN16G3077' => 'fan', 'FAN16G3624' => 'fan', 'FAN17G0221' => 'fan', 'FAN20G2492' => 'fan', 'FAN20G2905' => 'fan', 'FAN21G0548' => 'fan', 'FAN21G1300' => 'fan', 'FAN22G0077' => 'fan', 'FAN22G1315' => 'fan', 'FAN24G1280' => 'fan', 'FAN24G1445' => 'fan', 'FAN24G3527' => 'fan', 'FAN25G0464' => 'fan', 'FAN25G2885' => 'fan', 'FAN25G3270' => 'fan', 'FAN27G1101' => 'fan', 'FAN27G2846' => 'fan', 'FAN27G3524' => 'fan', 'FvH4_2g11770' => 'fve', 'FvH4_2g15630' => 'fve', 'FvH4_3g05570' => 'fve', 'FvH4_3g09110' => 'fve', 'FvH4_3g19940' => 'fve', 'FvH4_4g04821' => 'fve', 'FvH4_4g31480' => 'fve', 'FvH4_7g01740' => 'fve', 'Glyma.05G130400' => 'gma', 'Glyma.05G156400' => 'gma', 'Glyma.07G197000' => 'gma', 'Glyma.08G085151' => 'gma', 'Glyma.08G114500' => 'gma', 'Glyma.08G300400' => 'gma', 'Glyma.10G215800' => 'gma', 'Glyma.12G224400' => 'gma', 'Glyma.13G179300' => 'gma', 'Glyma.13G218151' => 'gma', 'Glyma.13G238800' => 'gma', 'Glyma.13G276900' => 'gma', 'Glyma.14G078200' => 'gma', 'Glyma.15G074500' => 'gma', 'Glyma.15G094100' => 'gma', 'Glyma.17G247200' => 'gma', 'Glyma.18G120100' => 'gma', 'Glyma.20G176000' => 'gma', 'Gohir.A01G063600' => 'ghi', 'Gohir.A01G170301' => 'ghi', 'Gohir.A02G060500' => 'ghi', 'Gohir.A05G133850' => 'ghi', 'Gohir.A05G161400' => 'ghi', 'Gohir.A06G012900' => 'ghi', 'Gohir.A06G035901' => 'ghi', 'Gohir.A06G127100' => 'ghi', 'Gohir.A06G210500' => 'ghi', 'Gohir.A08G008650' => 'ghi', 'Gohir.A09G072700' => 'ghi', 'Gohir.A09G088301' => 'ghi', 'Gohir.A10G040600' => 'ghi', 'Gohir.A12G036300' => 'ghi', 'Gohir.A12G143350' => 'ghi', 'Gohir.A12G165500' => 'ghi', 'Gohir.A13G145700' => 'ghi', 'Gohir.D01G050000' => 'ghi', 'Gohir.D01G051366' => 'ghi', 'Gohir.D01G161350' => 'ghi', 'Gohir.D02G065900' => 'ghi', 'Gohir.D05G164200' => 'ghi', 'Gohir.D05G355500' => 'ghi', 'Gohir.D06G010400' => 'ghi', 'Gohir.D06G111250' => 'ghi', 'Gohir.D06G132000' => 'ghi', 'Gohir.D06G210500' => 'ghi', 'Gohir.D07G165675' => 'ghi', 'Gohir.D08G062240' => 'ghi', 'Gohir.D08G086101' => 'ghi', 'Gohir.D08G138060' => 'ghi', 'Gohir.D09G072300' => 'ghi', 'Gohir.D10G041400' => 'ghi', 'Gohir.D11G191020' => 'ghi', 'Gohir.D11G212066' => 'ghi', 'Gohir.D12G036300' => 'ghi', 'Gohir.D12G168600' => 'ghi', 'Gohir.D13G150600' => 'ghi', 'Gorai.001G057300' => 'gra', 'Gorai.002G069900' => 'gra', 'Gorai.002G200000' => 'gra', 'Gorai.003G067600' => 'gra', 'Gorai.005G074800' => 'gra', 'Gorai.006G087300' => 'gra', 'Gorai.008G037500' => 'gra', 'Gorai.008G181400' => 'gra', 'Gorai.009G169400' => 'gra', 'Gorai.009G387900' => 'gra', 'Gorai.010G013300' => 'gra', 'Gorai.010G153800' => 'gra', 'Gorai.010G255800' => 'gra', 'Gorai.011G043700' => 'gra', 'Gorai.011G198900' => 'gra', 'Gorai.013G168400' => 'gra', 'GSVIVG01005212001' => 'vvi', 'GSVIVG01006163001' => 'vvi', 'GSVIVG01009625001' => 'vvi', 'GSVIVG01014338001' => 'vvi', 'GSVIVG01020005001' => 'vvi', 'GSVIVG01021450001' => 'vvi', 'GSVIVG01023975001' => 'vvi', 'GSVIVG01034490001' => 'vvi', 'HanXRQChr04g0112071' => 'han', 'HanXRQChr05g0131151' => 'han', 'HanXRQChr09g0262371' => 'han', 'HanXRQChr09g0268401' => 'han', 'HanXRQChr10g0279241' => 'han', 'HanXRQChr10g0297961' => 'han', 'HanXRQChr11g0326231' => 'han', 'HanXRQChr11g0328471' => 'han', 'HanXRQChr16g0507941' => 'han', 'HanXRQChr17g0560211' => 'han', 'Haze_02108' => 'cav', 'Haze_02428' => 'cav', 'Haze_05593' => 'cav', 'Haze_06448' => 'cav', 'Haze_09427' => 'cav', 'Haze_12022' => 'cav', 'Haze_17612' => 'cav', 'Haze_17928' => 'cav', 'Hma1.2p1_0032F.1_g019250' => 'hma', 'Hma1.2p1_0163F.1_g072690' => 'hma', 'Hma1.2p1_0265F.1_g106710' => 'hma', 'Hma1.2p1_0286F.1_g113970' => 'hma', 'Hma1.2p1_0363F.1_g136640' => 'hma', 'Hma1.2p1_0584F.1_g183470' => 'hma', 'Hma1.2p1_0885F.1_g232570' => 'hma', 'HPP92_006022' => 'vpl', 'HPP92_007320' => 'vpl', 'HPP92_011521' => 'vpl', 'HPP92_019387' => 'vpl', 'HPP92_024038' => 'vpl', 'Hund05891' => 'sun', 'Hund06450' => 'sun', 'Hund12053' => 'sun', 'Hund16800' => 'sun', 'Hund21222' => 'sun', 'Hund22896' => 'sun', 'Hund23746' => 'sun', 'Hund27083' => 'sun', 'Lalb_Chr02g0141831' => 'lal', 'Lalb_Chr02g0141841' => 'lal', 'Lalb_Chr05g0220411' => 'lal', 'Lalb_Chr06g0162081' => 'lal', 'Lalb_Chr09g0327651' => 'lal', 'Lalb_Chr13g0295051' => 'lal', 'Lalb_Chr15g0086801' => 'lal', 'Lalb_Chr16g0383781' => 'lal', 'Lalb_Chr16g0383791' => 'lal', 'Lalb_Chr18g0055441' => 'lal', 'Lalb_Chr18g0059611' => 'lal', 'Lalb_Chr20g0109661' => 'lal', 'Lalb_Chr20g0109831' => 'lal', 'Lalb_Chr20g0121871' => 'lal', 'Lalb_Chr22g0355361' => 'lal', 'Lalb_Chr25g0286371' => 'lal', 'Lj1A1187G43' => 'lonja', 'Lj1A1205T50' => 'lonja', 'Lj1A800G33' => 'lonja', 'Lj1C1187T7' => 'lonja', 'Lj1C843T11' => 'lonja', 'Lj1g0010940' => 'lja', 'Lj2A288T69' => 'lonja', 'Lj3g0024276' => 'lja', 'Lj4A47T76' => 'lonja', 'Lj4g0005805' => 'lja', 'Lj4g0006097' => 'lja', 'Lj4g0008528' => 'lja', 'Lj4g0024907' => 'lja', 'Lj5g0012472' => 'lja', 'Lj5g0018648' => 'lja', 'Lj6C789G1' => 'lonja', 'Lj6g0004000' => 'lja', 'Lj7A292G67' => 'lonja', 'Lj7A292T64' => 'lonja', 'Lj9A400T58' => 'lonja', 'Lsat_1_v5_gn_1_126181' => 'lsa', 'Lsat_1_v5_gn_4_123041' => 'lsa', 'Lsat_1_v5_gn_4_133620' => 'lsa', 'Lsat_1_v5_gn_4_53221' => 'lsa', 'Lsat_1_v5_gn_4_71961' => 'lsa', 'Lsat_1_v5_gn_7_105241' => 'lsa', 'Lsat_1_v5_gn_7_21361' => 'lsa', 'Lsat_1_v5_gn_7_28860' => 'lsa', 'Lsat_1_v5_gn_7_31260' => 'lsa', 'Lsat_1_v5_gn_8_52801' => 'lsa', 'Manes.02G191400' => 'mes', 'Manes.03G110100' => 'mes', 'Manes.04G071100' => 'mes', 'Manes.05G100500' => 'mes', 'Manes.05G164700' => 'mes', 'Manes.15G087000' => 'mes', 'Manes.15G121500' => 'mes', 'Manes.16G028300' => 'mes', 'Manes.17G046100' => 'mes', 'Manes.17G069800' => 'mes', 'Manes.18G100500' => 'mes', 'Mapoly0002s0109' => 'mpo', 'Mapoly0024s0007' => 'mpo', 'Mapoly0089s0032' => 'mpo', 'MBI04_g42241_MAGBIO' => 'mbi', 'MBI05_g11988_MAGBIO' => 'mbi', 'MBI05_g35452_MAGBIO' => 'mbi', 'MBI07_g30179_MAGBIO' => 'mbi', 'MBI07_g35859_MAGBIO' => 'mbi', 'MBI07_g35860_MAGBIO' => 'mbi', 'MBI07_g37166_MAGBIO' => 'mbi', 'MBI08_g18172_MAGBIO' => 'mbi', 'MBI09_g08441_MAGBIO' => 'mbi', 'MBI13_g01676_MAGBIO' => 'mbi', 'MBI14_g42955_MAGBIO' => 'mbi', 'MBI16_g13161_MAGBIO' => 'mbi', 'MBI17_g27204_MAGBIO' => 'mbi', 'MBI19_g21595_MAGBIO' => 'mbi', 'MD00G1148400' => 'mdo', 'MD02G1301200' => 'mdo', 'MD03G1227800' => 'mdo', 'MD05G1041100' => 'mdo', 'MD05G1124800' => 'mdo', 'MD05G1284000' => 'mdo', 'MD05G1338800' => 'mdo', 'MD05G1338900' => 'mdo', 'MD07G1022800' => 'mdo', 'MD10G1047500' => 'mdo', 'MD10G1127500' => 'mdo', 'MD10G1262300' => 'mdo', 'MD10G1293800' => 'mdo', 'MD16G1074300' => 'mdo', 'Medtr1g021670' => 'mtr', 'Medtr1g096320' => 'mtr', 'Medtr2g013690' => 'mtr', 'Medtr2g019450' => 'mtr', 'Medtr2g085170' => 'mtr', 'Medtr4g088785' => 'mtr', 'Medtr8g055930' => 'mtr', 'Medtr8g085850' => 'mtr', 'MELO3C002605.2' => 'cme', 'MELO3C003891.2' => 'cme', 'MELO3C004012.2' => 'cme', 'MELO3C007134.2' => 'cme', 'MELO3C008118.2' => 'cme', 'MELO3C016700.2' => 'cme', 'MELO3C024127.2' => 'cme', 'MELO3C033361.2' => 'cme', 'MELO3C033362.2' => 'cme', 'Migut.C00430' => 'egut', 'Migut.C01246' => 'egut', 'Migut.E00101' => 'egut', 'Migut.H01486' => 'egut', 'Migut.H01939' => 'egut', 'Migut.K00360' => 'egut', 'Migut.M00910' => 'egut', 'Migut.M01139' => 'egut', 'Migut.N02677' => 'egut', 'MSTRG.13252' => 'ama', 'MSTRG.14701' => 'ama', 'MSTRG.1521' => 'ama', 'MSTRG.15884' => 'ama', 'MSTRG.16242' => 'ama', 'MSTRG.22285' => 'ama', 'MSTRG.22444' => 'ama', 'MSTRG.2349' => 'ama', 'MSTRG.26308' => 'ama', 'MSTRG.28296' => 'ama', 'MSTRG.9895' => 'ama', 'Nitab4.5_0000110g0060' => 'nta', 'Nitab4.5_0000420g0130' => 'nta', 'Nitab4.5_0000422g0030' => 'nta', 'Nitab4.5_0000560g0180' => 'nta', 'Nitab4.5_0000703g0100' => 'nta', 'Nitab4.5_0000786g0200' => 'nta', 'Nitab4.5_0001336g0020' => 'nta', 'Nitab4.5_0001796g0030' => 'nta', 'Nitab4.5_0003348g0060' => 'nta', 'Nitab4.5_0003698g0040' => 'nta', 'Nitab4.5_0003942g0090' => 'nta', 'Nitab4.5_0004775g0070' => 'nta', 'Nitab4.5_0004864g0030' => 'nta', 'Nitab4.5_0005615g0020' => 'nta', 'Nitab4.5_0009288g0030' => 'nta', 'Nitab4.5_0009341g0010' => 'nta', 'Nitab4.5_0009535g0010' => 'nta', 'Nn1g03995' => 'nnu', 'Nn1g04100' => 'nnu', 'Nn1g06530' => 'nnu', 'Nn3g16404' => 'nnu', 'Nn3g17212' => 'nnu', 'Nn3g20776' => 'nnu', 'Nn3g21923' => 'nnu', 'Nn5g27737' => 'nnu', 'Nn5g29461' => 'nnu', 'Nn7g38355' => 'nnu', 'Nn8g39873' => 'nnu', 'Oeu000548.2' => 'oeu', 'Oeu004672.1' => 'oeu', 'Oeu015605.2' => 'oeu', 'Oeu016092.1' => 'oeu', 'Oeu017879.3' => 'oeu', 'Oeu024910.1' => 'oeu', 'Oeu028965.1' => 'oeu', 'Oeu031269.1' => 'oeu', 'Oeu031270.1' => 'oeu', 'Oeu032535.1' => 'oeu', 'Oeu034151.1' => 'oeu', 'Oeu034152.1' => 'oeu', 'Oeu034588.2' => 'oeu', 'Oeu050846.1' => 'oeu', 'Oeu050849.2' => 'oeu', 'Oeu051063.2' => 'oeu', 'Oeu052368.1' => 'oeu', 'Oeu052370.1' => 'oeu', 'Os01g0210400' => 'osa', 'Os01g0304300' => 'osa', 'Os01g0749100' => 'osa', 'Os02g0745800' => 'osa', 'Os03g0769050' => 'osa', 'Os05g0531500' => 'osa', 'Os06g0724300' => 'osa', 'Os11g0198100' => 'osa', 'Peaxi162Scf00069g01425' => 'pax', 'Peaxi162Scf00280g00811' => 'pax', 'Peaxi162Scf00310g00615' => 'pax', 'Peaxi162Scf00362g00542' => 'pax', 'Peaxi162Scf00461g00310' => 'pax', 'Peaxi162Scf00530g00118' => 'pax', 'Peaxi162Scf00541g00057' => 'pax', 'Peaxi162Scf00661g00017' => 'pax', 'Peaxi162Scf00926g00027' => 'pax', 'Peaxi162Scf01064g00263' => 'pax', 'Peaxi162Scf01211g00135' => 'pax', 'PGR004G2336' => 'pgr', 'PGR042G0327' => 'pgr', 'PGR042G1957' => 'pgr', 'PGR042G2003' => 'pgr', 'PGR042G3929' => 'pgr', 'PGR083G1137' => 'pgr', 'PGR083G1364' => 'pgr', 'PGSC0003DMG400003381' => 'stu', 'PGSC0003DMG400003417' => 'stu', 'PGSC0003DMG400008981' => 'stu', 'PGSC0003DMG400012417' => 'stu', 'PGSC0003DMG400012823' => 'stu', 'PGSC0003DMG400016885' => 'stu', 'PGSC0003DMG400022812' => 'stu', 'PGSC0003DMG400029726' => 'stu', 'PGSC0003DMG401009243' => 'stu', 'PGSC0003DMG401031505' => 'stu', 'PGSC0003DMG402031505' => 'stu', 'Phvul.001G017600' => 'pvu', 'Phvul.002G193500' => 'pvu', 'Phvul.002G228900' => 'pvu', 'Phvul.002G236800' => 'pvu', 'Phvul.003G049500' => 'pvu', 'Phvul.005G072000' => 'pvu', 'Phvul.006G164800' => 'pvu', 'Phvul.006G185100' => 'pvu', 'Phvul.007G090000' => 'pvu', 'Potri.001G399800' => 'ptr', 'Potri.002G149900' => 'ptr', 'Potri.004G044100' => 'ptr', 'Potri.004G177600' => 'ptr', 'Potri.009G138000' => 'ptr', 'Potri.010G094000' => 'ptr', 'Potri.011G053000' => 'ptr', 'Potri.011G119300' => 'ptr', 'Potri.013G113700' => 'ptr', 'Potri.018G107800' => 'ptr', 'Potri.019G084100' => 'ptr', 'Pp3c14_23720' => 'ppa', 'Pp3c16_6340' => 'ppa', 'Pp3c23_13420' => 'ppa', 'Pp3c24_2740' => 'ppa', 'Pp3c25_860' => 'ppa', 'Pp3c8_21750' => 'ppa', 'Prupe.1G273000' => 'ppe', 'Prupe.1G273700' => 'ppe', 'Prupe.1G274100' => 'ppe', 'Prupe.2G023300' => 'ppe', 'Prupe.4G048000' => 'ppe', 'Prupe.4G080400' => 'ppe', 'Prupe.4G181200' => 'ppe', 'Prupe.8G056900' => 'ppe', 'Prupe.8G168700' => 'ppe', 'Psat1g189080' => 'psa', 'Psat1g204760' => 'psa', 'Psat4g175560' => 'psa', 'Psat4g177720' => 'psa', 'Psat5g244240' => 'psa', 'Psat6g010720' => 'psa', 'Psat6g187200' => 'psa', 'Psat7g072040' => 'psa', 'PSO017G3501' => 'pso', 'PSO063G2148' => 'pso', 'PSO063G5608' => 'pso', 'PSO210G6392' => 'pso', 'PSO541G2319' => 'pso', 'PSO541G2836' => 'pso', 'PSO541G4012' => 'pso', 'PSO541G6253' => 'pso', 'PSO675G0580' => 'pso', 'PSO675G0856' => 'pso', 'PSO675G5635' => 'pso', 'PSO675G9157' => 'pso', 'PSO832G1660' => 'pso', 'PSO832G1969' => 'pso', 'QL02p007186' => 'qlo', 'QL02p033904' => 'qlo', 'QL03p064391' => 'qlo', 'QL05p040593' => 'qlo', 'QL05p058242' => 'qlo', 'QL08p021825' => 'qlo', 'QL11p004981' => 'qlo', 'RcHm_v2.0_Chr1g0318301' => 'rch', 'RcHm_v2.0_Chr4g0418501' => 'rch', 'RcHm_v2.0_Chr4g0439971' => 'rch', 'RcHm_v2.0_Chr5g0008541' => 'rch', 'RcHm_v2.0_Chr5g0014101' => 'rch', 'RcHm_v2.0_Chr5g0014131' => 'rch', 'RcHm_v2.0_Chr5g0033621' => 'rch', 'RcHm_v2.0_Chr6g0272041' => 'rch', 'RcHm_v2.0_Chr6g0278831' => 'rch', 'Rhsim02G0130400' => 'rsi', 'Rhsim02G0171100' => 'rsi', 'Rhsim05G0053000' => 'rsi', 'Rhsim05G0053100' => 'rsi', 'Rhsim06G0096500' => 'rsi', 'Rhsim06G0096600' => 'rsi', 'Rhsim06G0199100' => 'rsi', 'Rhsim12G0062300' => 'rsi', 'Rhsim12G0062800' => 'rsi', 'Sabra02G0118600' => 'sbr', 'Sabra04G0027300' => 'sbr', 'Sabra04G0119500' => 'sbr', 'Sabra08G0112500' => 'sbr', 'Sabra11G0036800' => 'sbr', 'Sabra11G0103800' => 'sbr', 'Sabra13G0096300' => 'sbr', 'Sabra16G0262300' => 'sbr', 'Sabra18G0091700' => 'sbr', 'Sabra19G0095400' => 'sbr', 'SalBow6G3080' => 'sbo', 'SalBow7G1157' => 'sbo', 'SalBow7G2123' => 'sbo', 'SalBow7G2285' => 'sbo', 'SalBow7G3537' => 'sbo', 'SalBow8G2947' => 'sbo', 'SalBow8G4463' => 'sbo', 'SalBow8G5466' => 'sbo', 'Sc01g0001750' => 'sci', 'Sc02g0006640' => 'sci', 'Sc02g0006670' => 'sci', 'Sc04g0008220' => 'sci', 'Sc05g0006190' => 'sci', 'Sc08g0002760' => 'sci', 'Sc17g0006170' => 'sci', 'Sc22g0002050' => 'sci', 'Sc23g0001190' => 'sci', 'Sc24g0000980' => 'sci', 'Sed0006245' => 'sed', 'Sed0007543' => 'sed', 'Sed0009411' => 'sed', 'Sed0010765' => 'sed', 'Sed0012944' => 'sed', 'Sed0014682' => 'sed', 'Sed0016174' => 'sed', 'Sed0016796' => 'sed', 'Sed0020317' => 'sed', 'Sed0021467' => 'sed', 'SEGI_01316' => 'sgi', 'SEGI_03374' => 'sgi', 'SEGI_16265' => 'sgi', 'SEGI_18569' => 'sgi', 'SEGI_20351' => 'sgi', 'SEGI_26395' => 'sgi', 'SEGI_29469' => 'sgi', 'SEGI_34771' => 'sgi', 'SEGI_36769' => 'sgi', 'SEGI_37139' => 'sgi', 'SGA_v2.0_scaffold100G29687' => 'sas', 'SGA_v2.0_scaffold118G32472' => 'sas', 'SGA_v2.0_scaffold14G07051' => 'sas', 'SGA_v2.0_scaffold183G39845' => 'sas', 'SGA_v2.0_scaffold1G00174' => 'sas', 'SGA_v2.0_scaffold22G09714' => 'sas', 'SGA_v2.0_scaffold333G48992' => 'sas', 'SGA_v2.0_scaffold46G17491' => 'sas', 'SGA_v2.0_scaffold49G18294' => 'sas', 'SGA_v2.0_scaffold63G21658' => 'sas', 'SHI01741' => 'shi', 'SHI05771' => 'shi', 'SHI18077' => 'shi', 'SHI20525' => 'shi', 'SHI20527' => 'shi', 'SHI20528' => 'shi', 'SMO172G0185' => 'smo', 'SMO198G0020' => 'smo', 'SMO351G0006' => 'smo', 'SMO356G0118' => 'smo', 'SMO358G0296' => 'smo', 'SMO367G0079' => 'smo', 'SMO367G1277' => 'smo', 'Solyc01g014220.3' => 'sly', 'Solyc01g111770.2' => 'sly', 'Solyc02g078180.3' => 'sly', 'Solyc03g006430.3' => 'sly', 'Solyc03g006456.1' => 'sly', 'Solyc03g079860.2' => 'sly', 'Solyc04g079770.3' => 'sly', 'Solyc05g007430.4' => 'sly', 'Solyc07g063150.3' => 'sly', 'Solyc08g016620.3' => 'sly', 'Solyc09g057590.3' => 'sly', 'Solyc09g057600.1' => 'sly', 'Solyc10g009050.3' => 'sly', 'Solyc11g017420.2' => 'sly', 'Sopen01g053810' => 'spe', 'Sopen02g023040' => 'spe', 'Sopen03g002440' => 'spe', 'Sopen04g033350' => 'spe', 'Sopen05g003310' => 'spe', 'Sopen07g004050' => 'spe', 'Sopen07g031340' => 'spe', 'Sopen08g006990' => 'spe', 'Sopen10g004830' => 'spe', 'Sopen11g009370' => 'spe', 'Sp1g24450' => 'spa', 'Sp1g29670' => 'spa', 'Sp1g39600' => 'spa', 'Sp2g11080' => 'spa', 'Sp2g13970' => 'spa', 'Sp4g16130' => 'spa', 'Sp6g13080' => 'spa', 'Sp7g37270' => 'spa', 'TAR371G0065' => 'tar', 'TAR376G0340' => 'tar', 'TAR376G0435' => 'tar', 'TAR381G0002' => 'tar', 'TAR381G1236' => 'tar', 'TAR624G0055' => 'tar', 'TAR624G0324' => 'tar', 'TAR624G0696' => 'tar', 'TAR624G0906' => 'tar', 'TAR625G0107' => 'tar', 'TAR626G0015' => 'tar', 'TAR626G1356' => 'tar', 'TAR627G0888' => 'tar', 'TAR628G0399' => 'tar', 'TAR628G1327' => 'tar', 'TAR629G2831' => 'tar', 'TAR629G2874' => 'tar', 'TAR633G1432' => 'tar', 'TAR633G2771' => 'tar', 'THA.LOC104803394' => 'tha', 'THA.LOC104805153' => 'tha', 'THA.LOC104806784' => 'tha', 'THA.LOC104810473' => 'tha', 'THA.LOC104813100' => 'tha', 'THA.LOC104814215' => 'tha', 'THA.LOC104815554' => 'tha', 'THA.LOC104820544' => 'tha', 'THA.LOC104824754' => 'tha', 'THA.LOC104827717' => 'tha', 'Thecc.02G031400' => 'tca', 'Thecc.02G055900' => 'tca', 'Thecc.02G350800' => 'tca', 'Thecc.06G150900' => 'tca', 'Thecc.06G186600' => 'tca', 'Thecc.07G089600' => 'tca', 'Thecc.08G020400' => 'tca', 'Thecc.08G182100' => 'tca', 'Thhalv10000873m.g' => 'esa', 'Thhalv10004185m.g' => 'esa', 'Thhalv10006981m.g' => 'esa', 'Thhalv10007204m.g' => 'esa', 'Thhalv10011374m.g' => 'esa', 'Thhalv10013482m.g' => 'esa', 'Thhalv10017801m.g' => 'esa', 'Thhalv10024983m.g' => 'esa', 'TPR.G12072' => 'tpr', 'TPR.G15769' => 'tpr', 'TPR.G16504' => 'tpr', 'TPR.G16506' => 'tpr', 'TPR.G24345' => 'tpr', 'TPR.G26666' => 'tpr', 'TPR.G27320' => 'tpr', 'TPR.G31819' => 'tpr', 'TPR.G38879' => 'tpr', 'TPR.G39015' => 'tpr', 'TPR.G8819' => 'tpr', 'TWI09G0924' => 'twi', 'TWI12G0811' => 'twi', 'TWI12G1294' => 'twi', 'TWI31G0150' => 'twi', 'TWI36G1262' => 'twi', 'TWI38G1287' => 'twi', 'TWI38G1633' => 'twi', 'TWI38G1982' => 'twi', 'TWI39G0116' => 'twi', 'TWI60G1011' => 'twi', 'TWI63G0171' => 'twi', 'TWI73G0839' => 'twi', 'TWI79G1511' => 'twi', 'unitig_0.g915' => 'ugi', 'unitig_0.g916' => 'ugi', 'unitig_21.g20219' => 'ugi', 'unitig_21.g20416' => 'ugi', 'unitig_578.g16132' => 'ugi', 'unitig_578.g16718' => 'ugi', 'unitig_62.g23481' => 'ugi', 'unitig_744.g24535' => 'ugi', 'unitig_749.g13525' => 'ugi', 'vmacro01248' => 'vma', 'vmacro02290' => 'vma', 'vmacro10946' => 'vma', 'vmacro11865' => 'vma', 'vmacro12493' => 'vma', 'vmacro17322' => 'vma', 'vmacro21599' => 'vma', 'vmacro23041' => 'vma', 'VMungo0251G0004' => 'vmu', 'VMungo0251G2639' => 'vmu', 'VMungo0251G2967' => 'vmu', 'VMungo0540G0864' => 'vmu', 'VMungo0540G1569' => 'vmu', 'VMungo0647G0317' => 'vmu', 'VMungo0720G1373' => 'vmu', 'VMungo0720G1508' => 'vmu', 'VMungo1080G0485' => 'vmu', 'VMungo1215G3177' => 'vmu', 'Zm00001eb112600' => 'zma', 'Zm00001eb120220' => 'zma', 'Zm00001eb153240' => 'zma', 'Zm00001eb168880' => 'zma', 'Zm00001eb213920' => 'zma', 'Zm00001eb228280' => 'zma', 'Zm00001eb254580' => 'zma', 'Zm00001eb272180' => 'zma', 'Zm00001eb293190' => 'zma', 'Zm00001eb322930' => 'zma', 'Zm00001eb353360' => 'zma', 'Zm00001eb353390' => 'zma', 'Zm00001eb353430' => 'zma', 'Zm00001eb353440' => 'zma', 'Zm00001eb353780' => 'zma' ), 'gf_id' => 'HOM05D000499', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000499' ), 'data_identifier' => 'HOM05D000499', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000499', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1066', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p29780' => 'bna', 'A02p33180' => 'bna', 'A03p16470' => 'bna', 'A03p66010' => 'bna', 'A04p25970' => 'bna', 'A06p01270' => 'bna', 'A06p46080' => 'bna', 'A07p11400' => 'bna', 'A08p01840' => 'bna', 'A08p08230' => 'bna', 'A08p25740' => 'bna', 'A09p32070' => 'bna', 'A09p37830' => 'bna', 'A09p42840' => 'bna', 'A09p42850' => 'bna', 'Aa31LG10G2060' => 'aar', 'Aa31LG2G7410' => 'aar', 'Aa31LG6G10200' => 'aar', 'Aa31LG6G16680' => 'aar', 'Aa31LG6G8470' => 'aar', 'Aa31LG9G12730' => 'aar', 'Aa31LG9G13680' => 'aar', 'Aa31LG9G14920' => 'aar', 'Aa31LG9G6650' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4977' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5467' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3254' => 'aag', 'Actinidia02578' => 'ach', 'Actinidia07693' => 'ach', 'Actinidia08413' => 'ach', 'Actinidia08414' => 'ach', 'Actinidia15289' => 'ach', 'Actinidia19871' => 'ach', 'Actinidia21475' => 'ach', 'Actinidia22576' => 'ach', 'Actinidia28327' => 'ach', 'Actinidia32491' => 'ach', 'Actinidia39463' => 'ach', 'Actinidia39571' => 'ach', 'Ah.01g013750' => 'amhyb', 'Ah.01g023210' => 'amhyb', 'Ah.04g164850' => 'amhyb', 'Ah.05g178060' => 'amhyb', 'Ah.07g204270' => 'amhyb', 'Ah.07g208480' => 'amhyb', 'Ah.09g237410' => 'amhyb', 'Ah.14g089460' => 'amhyb', 'AL1G41790' => 'aly', 'AL1G49050' => 'aly', 'AL1G53810' => 'aly', 'AL1G61400' => 'aly', 'AL4G18580' => 'aly', 'AL5G12510' => 'aly', 'AL5G12540' => 'aly', 'AL6G43230' => 'aly', 'AL7G10370' => 'aly', 'AL7G19250' => 'aly', 'AL8G12240' => 'aly', 'AL8G18540' => 'aly', 'Aqoxy1G02409' => 'aox', 'Aqoxy2G03993' => 'aox', 'Aqoxy3G03357' => 'aox', 'Aqoxy4G00785' => 'aox', 'Aqoxy5G02598' => 'aox', 'Aqoxy6G00132' => 'aox', 'Aqoxy7G01776' => 'aox', 'Aqoxy7G02316' => 'aox', 'Aqoxy7G03973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.12AFKW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B8730' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27IQR1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3F75VG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3RE0GA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41TCQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.527VTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FIR39' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5W8UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DA38EV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ63HS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H1I32C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HC27T5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4M8AP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7N3CZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9UVDZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LS1NQA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT1D4B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SKC4TM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCFV76' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF9Q1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQWD9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1ZM88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WE07RT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YCK7VH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJE6Q6' => 'arhy', 'AT1G28240' => 'ath', 'AT1G34550' => 'ath', 'AT1G53040' => 'ath', 'AT2G02910' => 'ath', 'AT4G09630' => 'ath', 'AT4G38500' => 'ath', 'AT5G42660' => 'ath', 'AT5G46220' => 'ath', 'ATR0152G026' => 'atr', 'ATR0564G343' => 'atr', 'ATR0706G151' => 'atr', 'ATR0733G207' => 'atr', 'ATR0751G234' => 'atr', 'ATR0807G048' => 'atr', 'ATR1091G084' => 'atr', 'Atru.chr10.1229' => 'acertr', 'Atru.chr10.1230' => 'acertr', 'Atru.chr10.1874' => 'acertr', 'Atru.chr11.1808' => 'acertr', 'Atru.chr13.1795' => 'acertr', 'Atru.chr13.570' => 'acertr', 'Atru.chr2.2608' => 'acertr', 'Atru.chr2.2609' => 'acertr', 'Atru.chr5.3428' => 'acertr', 'Atru.chr8.1171' => 'acertr', 'AUR62004651' => 'cqu', 'AUR62008675' => 'cqu', 'AUR62010014' => 'cqu', 'AUR62013004' => 'cqu', 'AUR62014825' => 'cqu', 'AUR62015015' => 'cqu', 'AUR62015151' => 'cqu', 'AUR62017020' => 'cqu', 'AUR62019422' => 'cqu', 'AUR62023570' => 'cqu', 'AUR62025571' => 'cqu', 'AUR62029098' => 'cqu', 'AUR62033863' => 'cqu', 'AUR62034296' => 'cqu', 'AUR62040075' => 'cqu', 'BcaB02g07334' => 'bca', 'BcaB02g10575' => 'bca', 'BcaB03g12119' => 'bca', 'BcaB03g12120' => 'bca', 'BcaB03g13945' => 'bca', 'BcaB04g17123' => 'bca', 'BcaB04g17867' => 'bca', 'BcaB04g19839' => 'bca', 'BcaB07g30317' => 'bca', 'BcaB07g32432' => 'bca', 'BcaB07g33362' => 'bca', 'BcaB08g36611' => 'bca', 'BcaC01g00028' => 'bca', 'BcaC01g01356' => 'bca', 'BcaC01g02034' => 'bca', 'BcaC01g06051' => 'bca', 'BcaC03g16839' => 'bca', 'BcaC03g17176' => 'bca', 'BcaC05g26829' => 'bca', 'BcaC06g31490' => 'bca', 'BcaC06g35344' => 'bca', 'BcaC06g36570' => 'bca', 'BcaC07g37537' => 'bca', 'BcaC08g43491' => 'bca', 'BcaC08g43773' => 'bca', 'BcaNung00234' => 'bca', 'BcaNung01982' => 'bca', 'BcaNung03707' => 'bca', 'BcaNung06454' => 'bca', 'BolC2t10762H' => 'bol', 'BolC2t11191H' => 'bol', 'BolC3t14322H' => 'bol', 'BolC3t19747H' => 'bol', 'BolC3t21425H' => 'bol', 'BolC4t27800H' => 'bol', 'BolC5t31423H' => 'bol', 'BolC6t35951H' => 'bol', 'BolC6t36282H' => 'bol', 'BolC7t40678H' => 'bol', 'BolC7t40679H' => 'bol', 'BolC7t42222H' => 'bol', 'BolC7t43492H' => 'bol', 'BolC7t46785H' => 'bol', 'BolC8t47853H' => 'bol', 'BolC9t56805H' => 'bol', 'BraA02t08000Z' => 'bra', 'BraA02t08341Z' => 'bra', 'BraA03t10936Z' => 'bra', 'BraA03t15657Z' => 'bra', 'BraA04t18100Z' => 'bra', 'BraA05t20523Z' => 'bra', 'BraA06t23353Z' => 'bra', 'BraA06t27473Z' => 'bra', 'BraA06t27769Z' => 'bra', 'BraA07t28928Z' => 'bra', 'BraA08t32236Z' => 'bra', 'BraA08t32841Z' => 'bra', 'BraA08t34524Z' => 'bra', 'BraA09t38742Z' => 'bra', 'BraA09t39295Z' => 'bra', 'C02p47180' => 'bna', 'C02p50990' => 'bna', 'C03p19360' => 'bna', 'C03p74950' => 'bna', 'C03p91000' => 'bna', 'C04p63260' => 'bna', 'C05p27050' => 'bna', 'C06p08750' => 'bna', 'C06p11490' => 'bna', 'C07p02820' => 'bna', 'C07p17180' => 'bna', 'C07p29440' => 'bna', 'C07p63730' => 'bna', 'C09p39260' => 'bna', 'CAN.G1164.34' => 'can', 'CAN.G1164.39' => 'can', 'CAN.G1530.3' => 'can', 'CAN.G162.61' => 'can', 'CAN.G176.6' => 'can', 'CAN.G289.49' => 'can', 'CAN.G370.21' => 'can', 'CAN.G370.22' => 'can', 'CAN.G371.117' => 'can', 'CAN.G58.37' => 'can', 'CAN.G588.98' => 'can', 'CANSAT21G2266' => 'cansat', 'CANSAT25G2799' => 'cansat', 'CANSAT35G0862' => 'cansat', 'CANSAT35G1704' => 'cansat', 'CANSAT35G1760' => 'cansat', 'CANSAT56G3971' => 'cansat', 'CANSAT56G4116' => 'cansat', 'CANSAT80G1259' => 'cansat', 'CARHR027730' => 'chi', 'CARHR033880' => 'chi', 'CARHR043270' => 'chi', 'CARHR145330' => 'chi', 'CARHR145340' => 'chi', 'CARHR175570' => 'chi', 'CARHR181570' => 'chi', 'CARHR258470' => 'chi', 'CARHR260490' => 'chi', 'CARHR294220' => 'chi', 'Carub.0001s2668' => 'cru', 'Carub.0001s3257' => 'cru', 'Carub.0001s4220' => 'cru', 'Carub.0005s0179' => 'cru', 'Carub.0006s2807' => 'cru', 'Carub.0007s0039' => 'cru', 'Carub.0008s0169' => 'cru', 'Carub.0008s0636' => 'cru', 'Ca_00338_v3' => 'car', 'Ca_00542_v3' => 'car', 'Ca_01844_v3' => 'car', 'Ca_10611_v3' => 'car', 'Ca_13326_v3' => 'car', 'Ca_17944_v3' => 'car', 'Ca_18546_v3' => 'car', 'Ca_24219_v3' => 'car', 'Ca_29972_v3' => 'car', 'CBR_g3681' => 'cbr', 'CBR_g40021' => 'cbr', 'Cc01_g08140' => 'ccan', 'Cc02_g13410' => 'ccan', 'Cc02_g37480' => 'ccan', 'Cc05_g12030' => 'ccan', 'Cc09_g03370' => 'ccan', 'Cc09_g10300' => 'ccan', 'Cc10_g03530' => 'ccan', 'Cc10_g11380' => 'ccan', 'CDE01G0176' => 'cde', 'CDE02G0675' => 'cde', 'CDE02G0942' => 'cde', 'CDE02G1153' => 'cde', 'CDE02G4177' => 'cde', 'CDE04G2117' => 'cde', 'CDE04G2736' => 'cde', 'CDE08G1161' => 'cde', 'CDE09G1238' => 'cde', 'Cfa000467' => 'cfa', 'Cfa000947' => 'cfa', 'Cfa004969' => 'cfa', 'Cfa005284' => 'cfa', 'Cfa008993' => 'cfa', 'Cfa018187' => 'cfa', 'Cfa018454' => 'cfa', 'Cfa020585' => 'cfa', 'Ciclev10000424m.g' => 'ccl', 'Ciclev10003605m.g' => 'ccl', 'Ciclev10007828m.g' => 'ccl', 'Ciclev10014620m.g' => 'ccl', 'Ciclev10015169m.g' => 'ccl', 'Ciclev10018291m.g' => 'ccl', 'Ciclev10028256m.g' => 'ccl', 'Ciclev10033822m.g' => 'ccl', 'CiPaw.05G060300' => 'cil', 'CiPaw.05G085000' => 'cil', 'CiPaw.06G083700' => 'cil', 'CiPaw.06G120300' => 'cil', 'CiPaw.09G060500' => 'cil', 'CiPaw.09G123800' => 'cil', 'CiPaw.11G169700' => 'cil', 'CiPaw.12G118300' => 'cil', 'CiPaw.15G071000' => 'cil', 'CiPaw.15G081900' => 'cil', 'ClCG01G024610' => 'cla', 'ClCG03G006070' => 'cla', 'ClCG05G019250' => 'cla', 'ClCG09G009500' => 'cla', 'ClCG11G008200' => 'cla', 'ClCG11G018080' => 'cla', 'COL.COLO4_17373' => 'col', 'COL.COLO4_22994' => 'col', 'COL.COLO4_26389' => 'col', 'COL.COLO4_27170' => 'col', 'COL.COLO4_31074' => 'col', 'COL.COLO4_31465' => 'col', 'COL.COLO4_36438' => 'col', 'COL.COLO4_36439' => 'col', 'Cpa.g.c38781' => 'cpa', 'Cpa.g.sc128.12' => 'cpa', 'Cpa.g.sc166.7' => 'cpa', 'Cpa.g.sc166.8' => 'cpa', 'Cpa.g.sc20.111' => 'cpa', 'Cpa.g.sc27.31' => 'cpa', 'Cpa.g.sc64.36' => 'cpa', 'Cpa.g.sc64.37' => 'cpa', 'Cpa.g.sc66.49' => 'cpa', 'Cpa.g.sc80.64' => 'cpa', 'CsaV3_1G012320' => 'csa', 'CsaV3_2G008480' => 'csa', 'CsaV3_2G033450' => 'csa', 'CsaV3_3G044830' => 'csa', 'CsaV3_4G033710' => 'csa', 'CsaV3_6G051730' => 'csa', 'CsaV3_7G025350' => 'csa', 'CSS0001067' => 'camsi', 'CSS0005996' => 'camsi', 'CSS0006590' => 'camsi', 'CSS0009673' => 'camsi', 'CSS0010201' => 'camsi', 'CSS0010549' => 'camsi', 'CSS0011364' => 'camsi', 'CSS0014473' => 'camsi', 'CSS0014961' => 'camsi', 'CSS0020191' => 'camsi', 'CSS0021165' => 'camsi', 'CSS0022306' => 'camsi', 'CSS0030591' => 'camsi', 'CSS0030696' => 'camsi', 'CSS0032653' => 'camsi', 'CSS0037487' => 'camsi', 'CSS0041102' => 'camsi', 'CSS0041261' => 'camsi', 'CSS0046246' => 'camsi', 'CSS0049256' => 'camsi', 'DCAR_004075' => 'dca', 'DCAR_011538' => 'dca', 'DCAR_019553' => 'dca', 'DCAR_020952' => 'dca', 'DCAR_021739' => 'dca', 'DCAR_027407' => 'dca', 'DCAR_027913' => 'dca', 'DCAR_028066' => 'dca', 'Dinv05899' => 'din', 'Dinv07563' => 'din', 'Dinv08010' => 'din', 'Dinv14125' => 'din', 'Dinv20172' => 'din', 'Dinv30743' => 'din', 'Dinv31229' => 'din', 'Dinv34162' => 'din', 'Dinv36028' => 'din', 'Dinv39368' => 'din', 'Dinv40565' => 'din', 'Dinv41706' => 'din', 'Duzib052G0089' => 'dzi', 'Duzib116G0641' => 'dzi', 'Duzib132G0069' => 'dzi', 'Duzib132G1219' => 'dzi', 'Duzib147G0278' => 'dzi', 'Duzib160G0480' => 'dzi', 'Duzib170G0661' => 'dzi', 'Duzib177G0591' => 'dzi', 'Duzib187G1353' => 'dzi', 'Duzib192G0858' => 'dzi', 'Duzib192G0883' => 'dzi', 'Duzib213G0506' => 'dzi', 'Duzib235G0289' => 'dzi', 'Duzib251G0422' => 'dzi', 'ECA232G3898' => 'eca', 'ECA233G5950' => 'eca', 'ECA234G1699' => 'eca', 'ECA234G2421' => 'eca', 'ECA236G0426' => 'eca', 'ECA236G4331' => 'eca', 'ECA248G2573' => 'eca', 'EL10Ac1g00077' => 'bvu', 'EL10Ac1g01746' => 'bvu', 'EL10Ac2g03464' => 'bvu', 'EL10Ac4g08176' => 'bvu', 'EL10Ac7g17521' => 'bvu', 'EL10Ac8g20386' => 'bvu', 'EL10Ac9g21343' => 'bvu', 'EL10Ac9g22688' => 'bvu', 'Eucgr.B03434' => 'egr', 'Eucgr.D00618' => 'egr', 'Eucgr.E02395' => 'egr', 'Eucgr.F01129' => 'egr', 'Eucgr.F02622' => 'egr', 'Eucgr.F04207' => 'egr', 'FAN01G0570' => 'fan', 'FAN03G3351' => 'fan', 'FAN06G3702' => 'fan', 'FAN07G2149' => 'fan', 'FAN10G3758' => 'fan', 'FAN11G1170' => 'fan', 'FAN11G2050' => 'fan', 'FAN11G2724' => 'fan', 'FAN12G1700' => 'fan', 'FAN12G2028' => 'fan', 'FAN15G1160' => 'fan', 'FAN15G3063' => 'fan', 'FAN16G2540' => 'fan', 'FAN16G3077' => 'fan', 'FAN16G3624' => 'fan', 'FAN17G0221' => 'fan', 'FAN20G2492' => 'fan', 'FAN20G2905' => 'fan', 'FAN21G0548' => 'fan', 'FAN21G1300' => 'fan', 'FAN22G0077' => 'fan', 'FAN22G1315' => 'fan', 'FAN24G1280' => 'fan', 'FAN24G1445' => 'fan', 'FAN24G3527' => 'fan', 'FAN25G0464' => 'fan', 'FAN25G2885' => 'fan', 'FAN25G3270' => 'fan', 'FAN27G1101' => 'fan', 'FAN27G2846' => 'fan', 'FAN27G3524' => 'fan', 'FvH4_2g11770' => 'fve', 'FvH4_2g15630' => 'fve', 'FvH4_3g05570' => 'fve', 'FvH4_3g09110' => 'fve', 'FvH4_3g19940' => 'fve', 'FvH4_4g04821' => 'fve', 'FvH4_4g31480' => 'fve', 'FvH4_7g01740' => 'fve', 'Glyma.05G130400' => 'gma', 'Glyma.05G156400' => 'gma', 'Glyma.07G197000' => 'gma', 'Glyma.08G085151' => 'gma', 'Glyma.08G114500' => 'gma', 'Glyma.08G300400' => 'gma', 'Glyma.10G215800' => 'gma', 'Glyma.12G224400' => 'gma', 'Glyma.13G179300' => 'gma', 'Glyma.13G218151' => 'gma', 'Glyma.13G238800' => 'gma', 'Glyma.13G276900' => 'gma', 'Glyma.14G078200' => 'gma', 'Glyma.15G074500' => 'gma', 'Glyma.15G094100' => 'gma', 'Glyma.17G247200' => 'gma', 'Glyma.18G120100' => 'gma', 'Glyma.20G176000' => 'gma', 'Gohir.A01G063600' => 'ghi', 'Gohir.A01G170301' => 'ghi', 'Gohir.A02G060500' => 'ghi', 'Gohir.A05G133850' => 'ghi', 'Gohir.A05G161400' => 'ghi', 'Gohir.A06G012900' => 'ghi', 'Gohir.A06G035901' => 'ghi', 'Gohir.A06G127100' => 'ghi', 'Gohir.A06G210500' => 'ghi', 'Gohir.A08G008650' => 'ghi', 'Gohir.A09G072700' => 'ghi', 'Gohir.A09G088301' => 'ghi', 'Gohir.A10G040600' => 'ghi', 'Gohir.A12G036300' => 'ghi', 'Gohir.A12G143350' => 'ghi', 'Gohir.A12G165500' => 'ghi', 'Gohir.A13G145700' => 'ghi', 'Gohir.D01G050000' => 'ghi', 'Gohir.D01G051366' => 'ghi', 'Gohir.D01G161350' => 'ghi', 'Gohir.D02G065900' => 'ghi', 'Gohir.D05G164200' => 'ghi', 'Gohir.D05G355500' => 'ghi', 'Gohir.D06G010400' => 'ghi', 'Gohir.D06G111250' => 'ghi', 'Gohir.D06G132000' => 'ghi', 'Gohir.D06G210500' => 'ghi', 'Gohir.D07G165675' => 'ghi', 'Gohir.D08G062240' => 'ghi', 'Gohir.D08G086101' => 'ghi', 'Gohir.D08G138060' => 'ghi', 'Gohir.D09G072300' => 'ghi', 'Gohir.D10G041400' => 'ghi', 'Gohir.D11G191020' => 'ghi', 'Gohir.D11G212066' => 'ghi', 'Gohir.D12G036300' => 'ghi', 'Gohir.D12G168600' => 'ghi', 'Gohir.D13G150600' => 'ghi', 'Gorai.001G057300' => 'gra', 'Gorai.002G069900' => 'gra', 'Gorai.002G200000' => 'gra', 'Gorai.003G067600' => 'gra', 'Gorai.005G074800' => 'gra', 'Gorai.006G087300' => 'gra', 'Gorai.008G037500' => 'gra', 'Gorai.008G181400' => 'gra', 'Gorai.009G169400' => 'gra', 'Gorai.009G387900' => 'gra', 'Gorai.010G013300' => 'gra', 'Gorai.010G153800' => 'gra', 'Gorai.010G255800' => 'gra', 'Gorai.011G043700' => 'gra', 'Gorai.011G198900' => 'gra', 'Gorai.013G168400' => 'gra', 'GSVIVG01005212001' => 'vvi', 'GSVIVG01006163001' => 'vvi', 'GSVIVG01009625001' => 'vvi', 'GSVIVG01014338001' => 'vvi', 'GSVIVG01020005001' => 'vvi', 'GSVIVG01021450001' => 'vvi', 'GSVIVG01023975001' => 'vvi', 'GSVIVG01034490001' => 'vvi', 'HanXRQChr04g0112071' => 'han', 'HanXRQChr05g0131151' => 'han', 'HanXRQChr09g0262371' => 'han', 'HanXRQChr09g0268401' => 'han', 'HanXRQChr10g0279241' => 'han', 'HanXRQChr10g0297961' => 'han', 'HanXRQChr11g0326231' => 'han', 'HanXRQChr11g0328471' => 'han', 'HanXRQChr16g0507941' => 'han', 'HanXRQChr17g0560211' => 'han', 'Haze_02108' => 'cav', 'Haze_02428' => 'cav', 'Haze_05593' => 'cav', 'Haze_06448' => 'cav', 'Haze_09427' => 'cav', 'Haze_12022' => 'cav', 'Haze_17612' => 'cav', 'Haze_17928' => 'cav', 'Hma1.2p1_0032F.1_g019250' => 'hma', 'Hma1.2p1_0163F.1_g072690' => 'hma', 'Hma1.2p1_0265F.1_g106710' => 'hma', 'Hma1.2p1_0286F.1_g113970' => 'hma', 'Hma1.2p1_0363F.1_g136640' => 'hma', 'Hma1.2p1_0584F.1_g183470' => 'hma', 'Hma1.2p1_0885F.1_g232570' => 'hma', 'HPP92_006022' => 'vpl', 'HPP92_007320' => 'vpl', 'HPP92_011521' => 'vpl', 'HPP92_019387' => 'vpl', 'HPP92_024038' => 'vpl', 'Hund05891' => 'sun', 'Hund06450' => 'sun', 'Hund12053' => 'sun', 'Hund16800' => 'sun', 'Hund21222' => 'sun', 'Hund22896' => 'sun', 'Hund23746' => 'sun', 'Hund27083' => 'sun', 'Lalb_Chr02g0141831' => 'lal', 'Lalb_Chr02g0141841' => 'lal', 'Lalb_Chr05g0220411' => 'lal', 'Lalb_Chr06g0162081' => 'lal', 'Lalb_Chr09g0327651' => 'lal', 'Lalb_Chr13g0295051' => 'lal', 'Lalb_Chr15g0086801' => 'lal', 'Lalb_Chr16g0383781' => 'lal', 'Lalb_Chr16g0383791' => 'lal', 'Lalb_Chr18g0055441' => 'lal', 'Lalb_Chr18g0059611' => 'lal', 'Lalb_Chr20g0109661' => 'lal', 'Lalb_Chr20g0109831' => 'lal', 'Lalb_Chr20g0121871' => 'lal', 'Lalb_Chr22g0355361' => 'lal', 'Lalb_Chr25g0286371' => 'lal', 'Lj1A1187G43' => 'lonja', 'Lj1A1205T50' => 'lonja', 'Lj1A800G33' => 'lonja', 'Lj1C1187T7' => 'lonja', 'Lj1C843T11' => 'lonja', 'Lj1g0010940' => 'lja', 'Lj2A288T69' => 'lonja', 'Lj3g0024276' => 'lja', 'Lj4A47T76' => 'lonja', 'Lj4g0005805' => 'lja', 'Lj4g0006097' => 'lja', 'Lj4g0008528' => 'lja', 'Lj4g0024907' => 'lja', 'Lj5g0012472' => 'lja', 'Lj5g0018648' => 'lja', 'Lj6C789G1' => 'lonja', 'Lj6g0004000' => 'lja', 'Lj7A292G67' => 'lonja', 'Lj7A292T64' => 'lonja', 'Lj9A400T58' => 'lonja', 'Lsat_1_v5_gn_1_126181' => 'lsa', 'Lsat_1_v5_gn_4_123041' => 'lsa', 'Lsat_1_v5_gn_4_133620' => 'lsa', 'Lsat_1_v5_gn_4_53221' => 'lsa', 'Lsat_1_v5_gn_4_71961' => 'lsa', 'Lsat_1_v5_gn_7_105241' => 'lsa', 'Lsat_1_v5_gn_7_21361' => 'lsa', 'Lsat_1_v5_gn_7_28860' => 'lsa', 'Lsat_1_v5_gn_7_31260' => 'lsa', 'Lsat_1_v5_gn_8_52801' => 'lsa', 'Manes.02G191400' => 'mes', 'Manes.03G110100' => 'mes', 'Manes.04G071100' => 'mes', 'Manes.05G100500' => 'mes', 'Manes.05G164700' => 'mes', 'Manes.15G087000' => 'mes', 'Manes.15G121500' => 'mes', 'Manes.16G028300' => 'mes', 'Manes.17G046100' => 'mes', 'Manes.17G069800' => 'mes', 'Manes.18G100500' => 'mes', 'Mapoly0002s0109' => 'mpo', 'Mapoly0024s0007' => 'mpo', 'Mapoly0089s0032' => 'mpo', 'MBI04_g42241_MAGBIO' => 'mbi', 'MBI05_g11988_MAGBIO' => 'mbi', 'MBI05_g35452_MAGBIO' => 'mbi', 'MBI07_g30179_MAGBIO' => 'mbi', 'MBI07_g35859_MAGBIO' => 'mbi', 'MBI07_g35860_MAGBIO' => 'mbi', 'MBI07_g37166_MAGBIO' => 'mbi', 'MBI08_g18172_MAGBIO' => 'mbi', 'MBI09_g08441_MAGBIO' => 'mbi', 'MBI13_g01676_MAGBIO' => 'mbi', 'MBI14_g42955_MAGBIO' => 'mbi', 'MBI16_g13161_MAGBIO' => 'mbi', 'MBI17_g27204_MAGBIO' => 'mbi', 'MBI19_g21595_MAGBIO' => 'mbi', 'MD00G1148400' => 'mdo', 'MD02G1301200' => 'mdo', 'MD03G1227800' => 'mdo', 'MD05G1041100' => 'mdo', 'MD05G1124800' => 'mdo', 'MD05G1284000' => 'mdo', 'MD05G1338800' => 'mdo', 'MD05G1338900' => 'mdo', 'MD07G1022800' => 'mdo', 'MD10G1047500' => 'mdo', 'MD10G1127500' => 'mdo', 'MD10G1262300' => 'mdo', 'MD10G1293800' => 'mdo', 'MD16G1074300' => 'mdo', 'Medtr1g021670' => 'mtr', 'Medtr1g096320' => 'mtr', 'Medtr2g013690' => 'mtr', 'Medtr2g019450' => 'mtr', 'Medtr2g085170' => 'mtr', 'Medtr4g088785' => 'mtr', 'Medtr8g055930' => 'mtr', 'Medtr8g085850' => 'mtr', 'MELO3C002605.2' => 'cme', 'MELO3C003891.2' => 'cme', 'MELO3C004012.2' => 'cme', 'MELO3C007134.2' => 'cme', 'MELO3C008118.2' => 'cme', 'MELO3C016700.2' => 'cme', 'MELO3C024127.2' => 'cme', 'MELO3C033361.2' => 'cme', 'MELO3C033362.2' => 'cme', 'Migut.C00430' => 'egut', 'Migut.C01246' => 'egut', 'Migut.E00101' => 'egut', 'Migut.H01486' => 'egut', 'Migut.H01939' => 'egut', 'Migut.K00360' => 'egut', 'Migut.M00910' => 'egut', 'Migut.M01139' => 'egut', 'Migut.N02677' => 'egut', 'MSTRG.13252' => 'ama', 'MSTRG.14701' => 'ama', 'MSTRG.1521' => 'ama', 'MSTRG.15884' => 'ama', 'MSTRG.16242' => 'ama', 'MSTRG.22285' => 'ama', 'MSTRG.22444' => 'ama', 'MSTRG.2349' => 'ama', 'MSTRG.26308' => 'ama', 'MSTRG.28296' => 'ama', 'MSTRG.9895' => 'ama', 'Nitab4.5_0000110g0060' => 'nta', 'Nitab4.5_0000420g0130' => 'nta', 'Nitab4.5_0000422g0030' => 'nta', 'Nitab4.5_0000560g0180' => 'nta', 'Nitab4.5_0000703g0100' => 'nta', 'Nitab4.5_0000786g0200' => 'nta', 'Nitab4.5_0001336g0020' => 'nta', 'Nitab4.5_0001796g0030' => 'nta', 'Nitab4.5_0003348g0060' => 'nta', 'Nitab4.5_0003698g0040' => 'nta', 'Nitab4.5_0003942g0090' => 'nta', 'Nitab4.5_0004775g0070' => 'nta', 'Nitab4.5_0004864g0030' => 'nta', 'Nitab4.5_0005615g0020' => 'nta', 'Nitab4.5_0009288g0030' => 'nta', 'Nitab4.5_0009341g0010' => 'nta', 'Nitab4.5_0009535g0010' => 'nta', 'Nn1g03995' => 'nnu', 'Nn1g04100' => 'nnu', 'Nn1g06530' => 'nnu', 'Nn3g16404' => 'nnu', 'Nn3g17212' => 'nnu', 'Nn3g20776' => 'nnu', 'Nn3g21923' => 'nnu', 'Nn5g27737' => 'nnu', 'Nn5g29461' => 'nnu', 'Nn7g38355' => 'nnu', 'Nn8g39873' => 'nnu', 'Oeu000548.2' => 'oeu', 'Oeu004672.1' => 'oeu', 'Oeu015605.2' => 'oeu', 'Oeu016092.1' => 'oeu', 'Oeu017879.3' => 'oeu', 'Oeu024910.1' => 'oeu', 'Oeu028965.1' => 'oeu', 'Oeu031269.1' => 'oeu', 'Oeu031270.1' => 'oeu', 'Oeu032535.1' => 'oeu', 'Oeu034151.1' => 'oeu', 'Oeu034152.1' => 'oeu', 'Oeu034588.2' => 'oeu', 'Oeu050846.1' => 'oeu', 'Oeu050849.2' => 'oeu', 'Oeu051063.2' => 'oeu', 'Oeu052368.1' => 'oeu', 'Oeu052370.1' => 'oeu', 'Os01g0210400' => 'osa', 'Os01g0304300' => 'osa', 'Os01g0749100' => 'osa', 'Os02g0745800' => 'osa', 'Os03g0769050' => 'osa', 'Os05g0531500' => 'osa', 'Os06g0724300' => 'osa', 'Os11g0198100' => 'osa', 'Peaxi162Scf00069g01425' => 'pax', 'Peaxi162Scf00280g00811' => 'pax', 'Peaxi162Scf00310g00615' => 'pax', 'Peaxi162Scf00362g00542' => 'pax', 'Peaxi162Scf00461g00310' => 'pax', 'Peaxi162Scf00530g00118' => 'pax', 'Peaxi162Scf00541g00057' => 'pax', 'Peaxi162Scf00661g00017' => 'pax', 'Peaxi162Scf00926g00027' => 'pax', 'Peaxi162Scf01064g00263' => 'pax', 'Peaxi162Scf01211g00135' => 'pax', 'PGR004G2336' => 'pgr', 'PGR042G0327' => 'pgr', 'PGR042G1957' => 'pgr', 'PGR042G2003' => 'pgr', 'PGR042G3929' => 'pgr', 'PGR083G1137' => 'pgr', 'PGR083G1364' => 'pgr', 'PGSC0003DMG400003381' => 'stu', 'PGSC0003DMG400003417' => 'stu', 'PGSC0003DMG400008981' => 'stu', 'PGSC0003DMG400012417' => 'stu', 'PGSC0003DMG400012823' => 'stu', 'PGSC0003DMG400016885' => 'stu', 'PGSC0003DMG400022812' => 'stu', 'PGSC0003DMG400029726' => 'stu', 'PGSC0003DMG401009243' => 'stu', 'PGSC0003DMG401031505' => 'stu', 'PGSC0003DMG402031505' => 'stu', 'Phvul.001G017600' => 'pvu', 'Phvul.002G193500' => 'pvu', 'Phvul.002G228900' => 'pvu', 'Phvul.002G236800' => 'pvu', 'Phvul.003G049500' => 'pvu', 'Phvul.005G072000' => 'pvu', 'Phvul.006G164800' => 'pvu', 'Phvul.006G185100' => 'pvu', 'Phvul.007G090000' => 'pvu', 'Potri.001G399800' => 'ptr', 'Potri.002G149900' => 'ptr', 'Potri.004G044100' => 'ptr', 'Potri.004G177600' => 'ptr', 'Potri.009G138000' => 'ptr', 'Potri.010G094000' => 'ptr', 'Potri.011G053000' => 'ptr', 'Potri.011G119300' => 'ptr', 'Potri.013G113700' => 'ptr', 'Potri.018G107800' => 'ptr', 'Potri.019G084100' => 'ptr', 'Pp3c14_23720' => 'ppa', 'Pp3c16_6340' => 'ppa', 'Pp3c23_13420' => 'ppa', 'Pp3c24_2740' => 'ppa', 'Pp3c25_860' => 'ppa', 'Pp3c8_21750' => 'ppa', 'Prupe.1G273000' => 'ppe', 'Prupe.1G273700' => 'ppe', 'Prupe.1G274100' => 'ppe', 'Prupe.2G023300' => 'ppe', 'Prupe.4G048000' => 'ppe', 'Prupe.4G080400' => 'ppe', 'Prupe.4G181200' => 'ppe', 'Prupe.8G056900' => 'ppe', 'Prupe.8G168700' => 'ppe', 'Psat1g189080' => 'psa', 'Psat1g204760' => 'psa', 'Psat4g175560' => 'psa', 'Psat4g177720' => 'psa', 'Psat5g244240' => 'psa', 'Psat6g010720' => 'psa', 'Psat6g187200' => 'psa', 'Psat7g072040' => 'psa', 'PSO017G3501' => 'pso', 'PSO063G2148' => 'pso', 'PSO063G5608' => 'pso', 'PSO210G6392' => 'pso', 'PSO541G2319' => 'pso', 'PSO541G2836' => 'pso', 'PSO541G4012' => 'pso', 'PSO541G6253' => 'pso', 'PSO675G0580' => 'pso', 'PSO675G0856' => 'pso', 'PSO675G5635' => 'pso', 'PSO675G9157' => 'pso', 'PSO832G1660' => 'pso', 'PSO832G1969' => 'pso', 'QL02p007186' => 'qlo', 'QL02p033904' => 'qlo', 'QL03p064391' => 'qlo', 'QL05p040593' => 'qlo', 'QL05p058242' => 'qlo', 'QL08p021825' => 'qlo', 'QL11p004981' => 'qlo', 'RcHm_v2.0_Chr1g0318301' => 'rch', 'RcHm_v2.0_Chr4g0418501' => 'rch', 'RcHm_v2.0_Chr4g0439971' => 'rch', 'RcHm_v2.0_Chr5g0008541' => 'rch', 'RcHm_v2.0_Chr5g0014101' => 'rch', 'RcHm_v2.0_Chr5g0014131' => 'rch', 'RcHm_v2.0_Chr5g0033621' => 'rch', 'RcHm_v2.0_Chr6g0272041' => 'rch', 'RcHm_v2.0_Chr6g0278831' => 'rch', 'Rhsim02G0130400' => 'rsi', 'Rhsim02G0171100' => 'rsi', 'Rhsim05G0053000' => 'rsi', 'Rhsim05G0053100' => 'rsi', 'Rhsim06G0096500' => 'rsi', 'Rhsim06G0096600' => 'rsi', 'Rhsim06G0199100' => 'rsi', 'Rhsim12G0062300' => 'rsi', 'Rhsim12G0062800' => 'rsi', 'Sabra02G0118600' => 'sbr', 'Sabra04G0027300' => 'sbr', 'Sabra04G0119500' => 'sbr', 'Sabra08G0112500' => 'sbr', 'Sabra11G0036800' => 'sbr', 'Sabra11G0103800' => 'sbr', 'Sabra13G0096300' => 'sbr', 'Sabra16G0262300' => 'sbr', 'Sabra18G0091700' => 'sbr', 'Sabra19G0095400' => 'sbr', 'SalBow6G3080' => 'sbo', 'SalBow7G1157' => 'sbo', 'SalBow7G2123' => 'sbo', 'SalBow7G2285' => 'sbo', 'SalBow7G3537' => 'sbo', 'SalBow8G2947' => 'sbo', 'SalBow8G4463' => 'sbo', 'SalBow8G5466' => 'sbo', 'Sc01g0001750' => 'sci', 'Sc02g0006640' => 'sci', 'Sc02g0006670' => 'sci', 'Sc04g0008220' => 'sci', 'Sc05g0006190' => 'sci', 'Sc08g0002760' => 'sci', 'Sc17g0006170' => 'sci', 'Sc22g0002050' => 'sci', 'Sc23g0001190' => 'sci', 'Sc24g0000980' => 'sci', 'Sed0006245' => 'sed', 'Sed0007543' => 'sed', 'Sed0009411' => 'sed', 'Sed0010765' => 'sed', 'Sed0012944' => 'sed', 'Sed0014682' => 'sed', 'Sed0016174' => 'sed', 'Sed0016796' => 'sed', 'Sed0020317' => 'sed', 'Sed0021467' => 'sed', 'SEGI_01316' => 'sgi', 'SEGI_03374' => 'sgi', 'SEGI_16265' => 'sgi', 'SEGI_18569' => 'sgi', 'SEGI_20351' => 'sgi', 'SEGI_26395' => 'sgi', 'SEGI_29469' => 'sgi', 'SEGI_34771' => 'sgi', 'SEGI_36769' => 'sgi', 'SEGI_37139' => 'sgi', 'SGA_v2.0_scaffold100G29687' => 'sas', 'SGA_v2.0_scaffold118G32472' => 'sas', 'SGA_v2.0_scaffold14G07051' => 'sas', 'SGA_v2.0_scaffold183G39845' => 'sas', 'SGA_v2.0_scaffold1G00174' => 'sas', 'SGA_v2.0_scaffold22G09714' => 'sas', 'SGA_v2.0_scaffold333G48992' => 'sas', 'SGA_v2.0_scaffold46G17491' => 'sas', 'SGA_v2.0_scaffold49G18294' => 'sas', 'SGA_v2.0_scaffold63G21658' => 'sas', 'SHI01741' => 'shi', 'SHI05771' => 'shi', 'SHI18077' => 'shi', 'SHI20525' => 'shi', 'SHI20527' => 'shi', 'SHI20528' => 'shi', 'SMO172G0185' => 'smo', 'SMO198G0020' => 'smo', 'SMO351G0006' => 'smo', 'SMO356G0118' => 'smo', 'SMO358G0296' => 'smo', 'SMO367G0079' => 'smo', 'SMO367G1277' => 'smo', 'Solyc01g014220.3' => 'sly', 'Solyc01g111770.2' => 'sly', 'Solyc02g078180.3' => 'sly', 'Solyc03g006430.3' => 'sly', 'Solyc03g006456.1' => 'sly', 'Solyc03g079860.2' => 'sly', 'Solyc04g079770.3' => 'sly', 'Solyc05g007430.4' => 'sly', 'Solyc07g063150.3' => 'sly', 'Solyc08g016620.3' => 'sly', 'Solyc09g057590.3' => 'sly', 'Solyc09g057600.1' => 'sly', 'Solyc10g009050.3' => 'sly', 'Solyc11g017420.2' => 'sly', 'Sopen01g053810' => 'spe', 'Sopen02g023040' => 'spe', 'Sopen03g002440' => 'spe', 'Sopen04g033350' => 'spe', 'Sopen05g003310' => 'spe', 'Sopen07g004050' => 'spe', 'Sopen07g031340' => 'spe', 'Sopen08g006990' => 'spe', 'Sopen10g004830' => 'spe', 'Sopen11g009370' => 'spe', 'Sp1g24450' => 'spa', 'Sp1g29670' => 'spa', 'Sp1g39600' => 'spa', 'Sp2g11080' => 'spa', 'Sp2g13970' => 'spa', 'Sp4g16130' => 'spa', 'Sp6g13080' => 'spa', 'Sp7g37270' => 'spa', 'TAR371G0065' => 'tar', 'TAR376G0340' => 'tar', 'TAR376G0435' => 'tar', 'TAR381G0002' => 'tar', 'TAR381G1236' => 'tar', 'TAR624G0055' => 'tar', 'TAR624G0324' => 'tar', 'TAR624G0696' => 'tar', 'TAR624G0906' => 'tar', 'TAR625G0107' => 'tar', 'TAR626G0015' => 'tar', 'TAR626G1356' => 'tar', 'TAR627G0888' => 'tar', 'TAR628G0399' => 'tar', 'TAR628G1327' => 'tar', 'TAR629G2831' => 'tar', 'TAR629G2874' => 'tar', 'TAR633G1432' => 'tar', 'TAR633G2771' => 'tar', 'THA.LOC104803394' => 'tha', 'THA.LOC104805153' => 'tha', 'THA.LOC104806784' => 'tha', 'THA.LOC104810473' => 'tha', 'THA.LOC104813100' => 'tha', 'THA.LOC104814215' => 'tha', 'THA.LOC104815554' => 'tha', 'THA.LOC104820544' => 'tha', 'THA.LOC104824754' => 'tha', 'THA.LOC104827717' => 'tha', 'Thecc.02G031400' => 'tca', 'Thecc.02G055900' => 'tca', 'Thecc.02G350800' => 'tca', 'Thecc.06G150900' => 'tca', 'Thecc.06G186600' => 'tca', 'Thecc.07G089600' => 'tca', 'Thecc.08G020400' => 'tca', 'Thecc.08G182100' => 'tca', 'Thhalv10000873m.g' => 'esa', 'Thhalv10004185m.g' => 'esa', 'Thhalv10006981m.g' => 'esa', 'Thhalv10007204m.g' => 'esa', 'Thhalv10011374m.g' => 'esa', 'Thhalv10013482m.g' => 'esa', 'Thhalv10017801m.g' => 'esa', 'Thhalv10024983m.g' => 'esa', 'TPR.G12072' => 'tpr', 'TPR.G15769' => 'tpr', 'TPR.G16504' => 'tpr', 'TPR.G16506' => 'tpr', 'TPR.G24345' => 'tpr', 'TPR.G26666' => 'tpr', 'TPR.G27320' => 'tpr', 'TPR.G31819' => 'tpr', 'TPR.G38879' => 'tpr', 'TPR.G39015' => 'tpr', 'TPR.G8819' => 'tpr', 'TWI09G0924' => 'twi', 'TWI12G0811' => 'twi', 'TWI12G1294' => 'twi', 'TWI31G0150' => 'twi', 'TWI36G1262' => 'twi', 'TWI38G1287' => 'twi', 'TWI38G1633' => 'twi', 'TWI38G1982' => 'twi', 'TWI39G0116' => 'twi', 'TWI60G1011' => 'twi', 'TWI63G0171' => 'twi', 'TWI73G0839' => 'twi', 'TWI79G1511' => 'twi', 'unitig_0.g915' => 'ugi', 'unitig_0.g916' => 'ugi', 'unitig_21.g20219' => 'ugi', 'unitig_21.g20416' => 'ugi', 'unitig_578.g16132' => 'ugi', 'unitig_578.g16718' => 'ugi', 'unitig_62.g23481' => 'ugi', 'unitig_744.g24535' => 'ugi', 'unitig_749.g13525' => 'ugi', 'vmacro01248' => 'vma', 'vmacro02290' => 'vma', 'vmacro10946' => 'vma', 'vmacro11865' => 'vma', 'vmacro12493' => 'vma', 'vmacro17322' => 'vma', 'vmacro21599' => 'vma', 'vmacro23041' => 'vma', 'VMungo0251G0004' => 'vmu', 'VMungo0251G2639' => 'vmu', 'VMungo0251G2967' => 'vmu', 'VMungo0540G0864' => 'vmu', 'VMungo0540G1569' => 'vmu', 'VMungo0647G0317' => 'vmu', 'VMungo0720G1373' => 'vmu', 'VMungo0720G1508' => 'vmu', 'VMungo1080G0485' => 'vmu', 'VMungo1215G3177' => 'vmu', 'Zm00001eb112600' => 'zma', 'Zm00001eb120220' => 'zma', 'Zm00001eb153240' => 'zma', 'Zm00001eb168880' => 'zma', 'Zm00001eb213920' => 'zma', 'Zm00001eb228280' => 'zma', 'Zm00001eb254580' => 'zma', 'Zm00001eb272180' => 'zma', 'Zm00001eb293190' => 'zma', 'Zm00001eb322930' => 'zma', 'Zm00001eb353360' => 'zma', 'Zm00001eb353390' => 'zma', 'Zm00001eb353430' => 'zma', 'Zm00001eb353440' => 'zma', 'Zm00001eb353780' => 'zma' ) $gf_id = 'HOM05D000499' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000499' ) $data_identifier = 'HOM05D000499' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 29, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 12, 'amhyb' => (int) 8, 'aly' => (int) 12, 'aox' => (int) 9, 'arhy' => (int) 26, 'ath' => (int) 8, 'atr' => (int) 7, 'acertr' => (int) 10, 'cqu' => (int) 15, 'bca' => (int) 29, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 11, 'cansat' => (int) 8, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 9, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 8, 'cpa' => (int) 10, 'csa' => (int) 7, 'camsi' => (int) 20, 'dca' => (int) 8, 'din' => (int) 12, 'dzi' => (int) 14, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 6, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 38, 'gra' => (int) 16, 'vvi' => (int) 8, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 5, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 11, 'lja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 11, 'mpo' => (int) 3, 'mbi' => (int) 14, 'mdo' => (int) 14, 'mtr' => (int) 8, 'cme' => (int) 9, 'egut' => (int) 9, 'ama' => (int) 11, 'nta' => (int) 17, 'nnu' => (int) 11, 'oeu' => (int) 18, 'osa' => (int) 8, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 6, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 9, 'rsi' => (int) 9, 'sbr' => (int) 10, 'sbo' => (int) 8, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 10, 'sas' => (int) 10, 'shi' => (int) 6, 'smo' => (int) 7, 'sly' => (int) 14, 'spe' => (int) 10, 'spa' => (int) 8, 'tar' => (int) 19, 'tha' => (int) 10, 'tca' => (int) 8, 'esa' => (int) 8, 'tpr' => (int) 11, 'twi' => (int) 13, 'ugi' => (int) 9, 'vma' => (int) 8, 'vmu' => (int) 10, 'zma' => (int) 15 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb353780' $species_info = array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ) $local_species = 'mes' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000499', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1066', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p29780' => 'bna', 'A02p33180' => 'bna', 'A03p16470' => 'bna', 'A03p66010' => 'bna', 'A04p25970' => 'bna', 'A06p01270' => 'bna', 'A06p46080' => 'bna', 'A07p11400' => 'bna', 'A08p01840' => 'bna', 'A08p08230' => 'bna', 'A08p25740' => 'bna', 'A09p32070' => 'bna', 'A09p37830' => 'bna', 'A09p42840' => 'bna', 'A09p42850' => 'bna', 'Aa31LG10G2060' => 'aar', 'Aa31LG2G7410' => 'aar', 'Aa31LG6G10200' => 'aar', 'Aa31LG6G16680' => 'aar', 'Aa31LG6G8470' => 'aar', 'Aa31LG9G12730' => 'aar', 'Aa31LG9G13680' => 'aar', 'Aa31LG9G14920' => 'aar', 'Aa31LG9G6650' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4977' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5467' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3254' => 'aag', 'Actinidia02578' => 'ach', 'Actinidia07693' => 'ach', 'Actinidia08413' => 'ach', 'Actinidia08414' => 'ach', 'Actinidia15289' => 'ach', 'Actinidia19871' => 'ach', 'Actinidia21475' => 'ach', 'Actinidia22576' => 'ach', 'Actinidia28327' => 'ach', 'Actinidia32491' => 'ach', 'Actinidia39463' => 'ach', 'Actinidia39571' => 'ach', 'Ah.01g013750' => 'amhyb', 'Ah.01g023210' => 'amhyb', 'Ah.04g164850' => 'amhyb', 'Ah.05g178060' => 'amhyb', 'Ah.07g204270' => 'amhyb', 'Ah.07g208480' => 'amhyb', 'Ah.09g237410' => 'amhyb', 'Ah.14g089460' => 'amhyb', 'AL1G41790' => 'aly', 'AL1G49050' => 'aly', 'AL1G53810' => 'aly', 'AL1G61400' => 'aly', 'AL4G18580' => 'aly', 'AL5G12510' => 'aly', 'AL5G12540' => 'aly', 'AL6G43230' => 'aly', 'AL7G10370' => 'aly', 'AL7G19250' => 'aly', 'AL8G12240' => 'aly', 'AL8G18540' => 'aly', 'Aqoxy1G02409' => 'aox', 'Aqoxy2G03993' => 'aox', 'Aqoxy3G03357' => 'aox', 'Aqoxy4G00785' => 'aox', 'Aqoxy5G02598' => 'aox', 'Aqoxy6G00132' => 'aox', 'Aqoxy7G01776' => 'aox', 'Aqoxy7G02316' => 'aox', 'Aqoxy7G03973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.12AFKW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B8730' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27IQR1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3F75VG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3RE0GA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41TCQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.527VTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FIR39' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5W8UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DA38EV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ63HS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H1I32C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HC27T5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4M8AP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7N3CZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9UVDZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LS1NQA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT1D4B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SKC4TM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCFV76' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF9Q1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQWD9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1ZM88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WE07RT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YCK7VH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJE6Q6' => 'arhy', 'AT1G28240' => 'ath', 'AT1G34550' => 'ath', 'AT1G53040' => 'ath', 'AT2G02910' => 'ath', 'AT4G09630' => 'ath', 'AT4G38500' => 'ath', 'AT5G42660' => 'ath', 'AT5G46220' => 'ath', 'ATR0152G026' => 'atr', 'ATR0564G343' => 'atr', 'ATR0706G151' => 'atr', 'ATR0733G207' => 'atr', 'ATR0751G234' => 'atr', 'ATR0807G048' => 'atr', 'ATR1091G084' => 'atr', 'Atru.chr10.1229' => 'acertr', 'Atru.chr10.1230' => 'acertr', 'Atru.chr10.1874' => 'acertr', 'Atru.chr11.1808' => 'acertr', 'Atru.chr13.1795' => 'acertr', 'Atru.chr13.570' => 'acertr', 'Atru.chr2.2608' => 'acertr', 'Atru.chr2.2609' => 'acertr', 'Atru.chr5.3428' => 'acertr', 'Atru.chr8.1171' => 'acertr', 'AUR62004651' => 'cqu', 'AUR62008675' => 'cqu', 'AUR62010014' => 'cqu', 'AUR62013004' => 'cqu', 'AUR62014825' => 'cqu', 'AUR62015015' => 'cqu', 'AUR62015151' => 'cqu', 'AUR62017020' => 'cqu', 'AUR62019422' => 'cqu', 'AUR62023570' => 'cqu', 'AUR62025571' => 'cqu', 'AUR62029098' => 'cqu', 'AUR62033863' => 'cqu', 'AUR62034296' => 'cqu', 'AUR62040075' => 'cqu', 'BcaB02g07334' => 'bca', 'BcaB02g10575' => 'bca', 'BcaB03g12119' => 'bca', 'BcaB03g12120' => 'bca', 'BcaB03g13945' => 'bca', 'BcaB04g17123' => 'bca', 'BcaB04g17867' => 'bca', 'BcaB04g19839' => 'bca', 'BcaB07g30317' => 'bca', 'BcaB07g32432' => 'bca', 'BcaB07g33362' => 'bca', 'BcaB08g36611' => 'bca', 'BcaC01g00028' => 'bca', 'BcaC01g01356' => 'bca', 'BcaC01g02034' => 'bca', 'BcaC01g06051' => 'bca', 'BcaC03g16839' => 'bca', 'BcaC03g17176' => 'bca', 'BcaC05g26829' => 'bca', 'BcaC06g31490' => 'bca', 'BcaC06g35344' => 'bca', 'BcaC06g36570' => 'bca', 'BcaC07g37537' => 'bca', 'BcaC08g43491' => 'bca', 'BcaC08g43773' => 'bca', 'BcaNung00234' => 'bca', 'BcaNung01982' => 'bca', 'BcaNung03707' => 'bca', 'BcaNung06454' => 'bca', 'BolC2t10762H' => 'bol', 'BolC2t11191H' => 'bol', 'BolC3t14322H' => 'bol', 'BolC3t19747H' => 'bol', 'BolC3t21425H' => 'bol', 'BolC4t27800H' => 'bol', 'BolC5t31423H' => 'bol', 'BolC6t35951H' => 'bol', 'BolC6t36282H' => 'bol', 'BolC7t40678H' => 'bol', 'BolC7t40679H' => 'bol', 'BolC7t42222H' => 'bol', 'BolC7t43492H' => 'bol', 'BolC7t46785H' => 'bol', 'BolC8t47853H' => 'bol', 'BolC9t56805H' => 'bol', 'BraA02t08000Z' => 'bra', 'BraA02t08341Z' => 'bra', 'BraA03t10936Z' => 'bra', 'BraA03t15657Z' => 'bra', 'BraA04t18100Z' => 'bra', 'BraA05t20523Z' => 'bra', 'BraA06t23353Z' => 'bra', 'BraA06t27473Z' => 'bra', 'BraA06t27769Z' => 'bra', 'BraA07t28928Z' => 'bra', 'BraA08t32236Z' => 'bra', 'BraA08t32841Z' => 'bra', 'BraA08t34524Z' => 'bra', 'BraA09t38742Z' => 'bra', 'BraA09t39295Z' => 'bra', 'C02p47180' => 'bna', 'C02p50990' => 'bna', 'C03p19360' => 'bna', 'C03p74950' => 'bna', 'C03p91000' => 'bna', 'C04p63260' => 'bna', 'C05p27050' => 'bna', 'C06p08750' => 'bna', 'C06p11490' => 'bna', 'C07p02820' => 'bna', 'C07p17180' => 'bna', 'C07p29440' => 'bna', 'C07p63730' => 'bna', 'C09p39260' => 'bna', 'CAN.G1164.34' => 'can', 'CAN.G1164.39' => 'can', 'CAN.G1530.3' => 'can', 'CAN.G162.61' => 'can', 'CAN.G176.6' => 'can', 'CAN.G289.49' => 'can', 'CAN.G370.21' => 'can', 'CAN.G370.22' => 'can', 'CAN.G371.117' => 'can', 'CAN.G58.37' => 'can', 'CAN.G588.98' => 'can', 'CANSAT21G2266' => 'cansat', 'CANSAT25G2799' => 'cansat', 'CANSAT35G0862' => 'cansat', 'CANSAT35G1704' => 'cansat', 'CANSAT35G1760' => 'cansat', 'CANSAT56G3971' => 'cansat', 'CANSAT56G4116' => 'cansat', 'CANSAT80G1259' => 'cansat', 'CARHR027730' => 'chi', 'CARHR033880' => 'chi', 'CARHR043270' => 'chi', 'CARHR145330' => 'chi', 'CARHR145340' => 'chi', 'CARHR175570' => 'chi', 'CARHR181570' => 'chi', 'CARHR258470' => 'chi', 'CARHR260490' => 'chi', 'CARHR294220' => 'chi', 'Carub.0001s2668' => 'cru', 'Carub.0001s3257' => 'cru', 'Carub.0001s4220' => 'cru', 'Carub.0005s0179' => 'cru', 'Carub.0006s2807' => 'cru', 'Carub.0007s0039' => 'cru', 'Carub.0008s0169' => 'cru', 'Carub.0008s0636' => 'cru', 'Ca_00338_v3' => 'car', 'Ca_00542_v3' => 'car', 'Ca_01844_v3' => 'car', 'Ca_10611_v3' => 'car', 'Ca_13326_v3' => 'car', 'Ca_17944_v3' => 'car', 'Ca_18546_v3' => 'car', 'Ca_24219_v3' => 'car', 'Ca_29972_v3' => 'car', 'CBR_g3681' => 'cbr', 'CBR_g40021' => 'cbr', 'Cc01_g08140' => 'ccan', 'Cc02_g13410' => 'ccan', 'Cc02_g37480' => 'ccan', 'Cc05_g12030' => 'ccan', 'Cc09_g03370' => 'ccan', 'Cc09_g10300' => 'ccan', 'Cc10_g03530' => 'ccan', 'Cc10_g11380' => 'ccan', 'CDE01G0176' => 'cde', 'CDE02G0675' => 'cde', 'CDE02G0942' => 'cde', 'CDE02G1153' => 'cde', 'CDE02G4177' => 'cde', 'CDE04G2117' => 'cde', 'CDE04G2736' => 'cde', 'CDE08G1161' => 'cde', 'CDE09G1238' => 'cde', 'Cfa000467' => 'cfa', 'Cfa000947' => 'cfa', 'Cfa004969' => 'cfa', 'Cfa005284' => 'cfa', 'Cfa008993' => 'cfa', 'Cfa018187' => 'cfa', 'Cfa018454' => 'cfa', 'Cfa020585' => 'cfa', 'Ciclev10000424m.g' => 'ccl', 'Ciclev10003605m.g' => 'ccl', 'Ciclev10007828m.g' => 'ccl', 'Ciclev10014620m.g' => 'ccl', 'Ciclev10015169m.g' => 'ccl', 'Ciclev10018291m.g' => 'ccl', 'Ciclev10028256m.g' => 'ccl', 'Ciclev10033822m.g' => 'ccl', 'CiPaw.05G060300' => 'cil', 'CiPaw.05G085000' => 'cil', 'CiPaw.06G083700' => 'cil', 'CiPaw.06G120300' => 'cil', 'CiPaw.09G060500' => 'cil', 'CiPaw.09G123800' => 'cil', 'CiPaw.11G169700' => 'cil', 'CiPaw.12G118300' => 'cil', 'CiPaw.15G071000' => 'cil', 'CiPaw.15G081900' => 'cil', 'ClCG01G024610' => 'cla', 'ClCG03G006070' => 'cla', 'ClCG05G019250' => 'cla', 'ClCG09G009500' => 'cla', 'ClCG11G008200' => 'cla', 'ClCG11G018080' => 'cla', 'COL.COLO4_17373' => 'col', 'COL.COLO4_22994' => 'col', 'COL.COLO4_26389' => 'col', 'COL.COLO4_27170' => 'col', 'COL.COLO4_31074' => 'col', 'COL.COLO4_31465' => 'col', 'COL.COLO4_36438' => 'col', 'COL.COLO4_36439' => 'col', 'Cpa.g.c38781' => 'cpa', 'Cpa.g.sc128.12' => 'cpa', 'Cpa.g.sc166.7' => 'cpa', 'Cpa.g.sc166.8' => 'cpa', 'Cpa.g.sc20.111' => 'cpa', 'Cpa.g.sc27.31' => 'cpa', 'Cpa.g.sc64.36' => 'cpa', 'Cpa.g.sc64.37' => 'cpa', 'Cpa.g.sc66.49' => 'cpa', 'Cpa.g.sc80.64' => 'cpa', 'CsaV3_1G012320' => 'csa', 'CsaV3_2G008480' => 'csa', 'CsaV3_2G033450' => 'csa', 'CsaV3_3G044830' => 'csa', 'CsaV3_4G033710' => 'csa', 'CsaV3_6G051730' => 'csa', 'CsaV3_7G025350' => 'csa', 'CSS0001067' => 'camsi', 'CSS0005996' => 'camsi', 'CSS0006590' => 'camsi', 'CSS0009673' => 'camsi', 'CSS0010201' => 'camsi', 'CSS0010549' => 'camsi', 'CSS0011364' => 'camsi', 'CSS0014473' => 'camsi', 'CSS0014961' => 'camsi', 'CSS0020191' => 'camsi', 'CSS0021165' => 'camsi', 'CSS0022306' => 'camsi', 'CSS0030591' => 'camsi', 'CSS0030696' => 'camsi', 'CSS0032653' => 'camsi', 'CSS0037487' => 'camsi', 'CSS0041102' => 'camsi', 'CSS0041261' => 'camsi', 'CSS0046246' => 'camsi', 'CSS0049256' => 'camsi', 'DCAR_004075' => 'dca', 'DCAR_011538' => 'dca', 'DCAR_019553' => 'dca', 'DCAR_020952' => 'dca', 'DCAR_021739' => 'dca', 'DCAR_027407' => 'dca', 'DCAR_027913' => 'dca', 'DCAR_028066' => 'dca', 'Dinv05899' => 'din', 'Dinv07563' => 'din', 'Dinv08010' => 'din', 'Dinv14125' => 'din', 'Dinv20172' => 'din', 'Dinv30743' => 'din', 'Dinv31229' => 'din', 'Dinv34162' => 'din', 'Dinv36028' => 'din', 'Dinv39368' => 'din', 'Dinv40565' => 'din', 'Dinv41706' => 'din', 'Duzib052G0089' => 'dzi', 'Duzib116G0641' => 'dzi', 'Duzib132G0069' => 'dzi', 'Duzib132G1219' => 'dzi', 'Duzib147G0278' => 'dzi', 'Duzib160G0480' => 'dzi', 'Duzib170G0661' => 'dzi', 'Duzib177G0591' => 'dzi', 'Duzib187G1353' => 'dzi', 'Duzib192G0858' => 'dzi', 'Duzib192G0883' => 'dzi', 'Duzib213G0506' => 'dzi', 'Duzib235G0289' => 'dzi', 'Duzib251G0422' => 'dzi', 'ECA232G3898' => 'eca', 'ECA233G5950' => 'eca', 'ECA234G1699' => 'eca', 'ECA234G2421' => 'eca', 'ECA236G0426' => 'eca', 'ECA236G4331' => 'eca', 'ECA248G2573' => 'eca', 'EL10Ac1g00077' => 'bvu', 'EL10Ac1g01746' => 'bvu', 'EL10Ac2g03464' => 'bvu', 'EL10Ac4g08176' => 'bvu', 'EL10Ac7g17521' => 'bvu', 'EL10Ac8g20386' => 'bvu', 'EL10Ac9g21343' => 'bvu', 'EL10Ac9g22688' => 'bvu', 'Eucgr.B03434' => 'egr', 'Eucgr.D00618' => 'egr', 'Eucgr.E02395' => 'egr', 'Eucgr.F01129' => 'egr', 'Eucgr.F02622' => 'egr', 'Eucgr.F04207' => 'egr', 'FAN01G0570' => 'fan', 'FAN03G3351' => 'fan', 'FAN06G3702' => 'fan', 'FAN07G2149' => 'fan', 'FAN10G3758' => 'fan', 'FAN11G1170' => 'fan', 'FAN11G2050' => 'fan', 'FAN11G2724' => 'fan', 'FAN12G1700' => 'fan', 'FAN12G2028' => 'fan', 'FAN15G1160' => 'fan', 'FAN15G3063' => 'fan', 'FAN16G2540' => 'fan', 'FAN16G3077' => 'fan', 'FAN16G3624' => 'fan', 'FAN17G0221' => 'fan', 'FAN20G2492' => 'fan', 'FAN20G2905' => 'fan', 'FAN21G0548' => 'fan', 'FAN21G1300' => 'fan', 'FAN22G0077' => 'fan', 'FAN22G1315' => 'fan', 'FAN24G1280' => 'fan', 'FAN24G1445' => 'fan', 'FAN24G3527' => 'fan', 'FAN25G0464' => 'fan', 'FAN25G2885' => 'fan', 'FAN25G3270' => 'fan', 'FAN27G1101' => 'fan', 'FAN27G2846' => 'fan', 'FAN27G3524' => 'fan', 'FvH4_2g11770' => 'fve', 'FvH4_2g15630' => 'fve', 'FvH4_3g05570' => 'fve', 'FvH4_3g09110' => 'fve', 'FvH4_3g19940' => 'fve', 'FvH4_4g04821' => 'fve', 'FvH4_4g31480' => 'fve', 'FvH4_7g01740' => 'fve', 'Glyma.05G130400' => 'gma', 'Glyma.05G156400' => 'gma', 'Glyma.07G197000' => 'gma', 'Glyma.08G085151' => 'gma', 'Glyma.08G114500' => 'gma', 'Glyma.08G300400' => 'gma', 'Glyma.10G215800' => 'gma', 'Glyma.12G224400' => 'gma', 'Glyma.13G179300' => 'gma', 'Glyma.13G218151' => 'gma', 'Glyma.13G238800' => 'gma', 'Glyma.13G276900' => 'gma', 'Glyma.14G078200' => 'gma', 'Glyma.15G074500' => 'gma', 'Glyma.15G094100' => 'gma', 'Glyma.17G247200' => 'gma', 'Glyma.18G120100' => 'gma', 'Glyma.20G176000' => 'gma', 'Gohir.A01G063600' => 'ghi', 'Gohir.A01G170301' => 'ghi', 'Gohir.A02G060500' => 'ghi', 'Gohir.A05G133850' => 'ghi', 'Gohir.A05G161400' => 'ghi', 'Gohir.A06G012900' => 'ghi', 'Gohir.A06G035901' => 'ghi', 'Gohir.A06G127100' => 'ghi', 'Gohir.A06G210500' => 'ghi', 'Gohir.A08G008650' => 'ghi', 'Gohir.A09G072700' => 'ghi', 'Gohir.A09G088301' => 'ghi', 'Gohir.A10G040600' => 'ghi', 'Gohir.A12G036300' => 'ghi', 'Gohir.A12G143350' => 'ghi', 'Gohir.A12G165500' => 'ghi', 'Gohir.A13G145700' => 'ghi', 'Gohir.D01G050000' => 'ghi', 'Gohir.D01G051366' => 'ghi', 'Gohir.D01G161350' => 'ghi', 'Gohir.D02G065900' => 'ghi', 'Gohir.D05G164200' => 'ghi', 'Gohir.D05G355500' => 'ghi', 'Gohir.D06G010400' => 'ghi', 'Gohir.D06G111250' => 'ghi', 'Gohir.D06G132000' => 'ghi', 'Gohir.D06G210500' => 'ghi', 'Gohir.D07G165675' => 'ghi', 'Gohir.D08G062240' => 'ghi', 'Gohir.D08G086101' => 'ghi', 'Gohir.D08G138060' => 'ghi', 'Gohir.D09G072300' => 'ghi', 'Gohir.D10G041400' => 'ghi', 'Gohir.D11G191020' => 'ghi', 'Gohir.D11G212066' => 'ghi', 'Gohir.D12G036300' => 'ghi', 'Gohir.D12G168600' => 'ghi', 'Gohir.D13G150600' => 'ghi', 'Gorai.001G057300' => 'gra', 'Gorai.002G069900' => 'gra', 'Gorai.002G200000' => 'gra', 'Gorai.003G067600' => 'gra', 'Gorai.005G074800' => 'gra', 'Gorai.006G087300' => 'gra', 'Gorai.008G037500' => 'gra', 'Gorai.008G181400' => 'gra', 'Gorai.009G169400' => 'gra', 'Gorai.009G387900' => 'gra', 'Gorai.010G013300' => 'gra', 'Gorai.010G153800' => 'gra', 'Gorai.010G255800' => 'gra', 'Gorai.011G043700' => 'gra', 'Gorai.011G198900' => 'gra', 'Gorai.013G168400' => 'gra', 'GSVIVG01005212001' => 'vvi', 'GSVIVG01006163001' => 'vvi', 'GSVIVG01009625001' => 'vvi', 'GSVIVG01014338001' => 'vvi', 'GSVIVG01020005001' => 'vvi', 'GSVIVG01021450001' => 'vvi', 'GSVIVG01023975001' => 'vvi', 'GSVIVG01034490001' => 'vvi', 'HanXRQChr04g0112071' => 'han', 'HanXRQChr05g0131151' => 'han', 'HanXRQChr09g0262371' => 'han', 'HanXRQChr09g0268401' => 'han', 'HanXRQChr10g0279241' => 'han', 'HanXRQChr10g0297961' => 'han', 'HanXRQChr11g0326231' => 'han', 'HanXRQChr11g0328471' => 'han', 'HanXRQChr16g0507941' => 'han', 'HanXRQChr17g0560211' => 'han', 'Haze_02108' => 'cav', 'Haze_02428' => 'cav', 'Haze_05593' => 'cav', 'Haze_06448' => 'cav', 'Haze_09427' => 'cav', 'Haze_12022' => 'cav', 'Haze_17612' => 'cav', 'Haze_17928' => 'cav', 'Hma1.2p1_0032F.1_g019250' => 'hma', 'Hma1.2p1_0163F.1_g072690' => 'hma', 'Hma1.2p1_0265F.1_g106710' => 'hma', 'Hma1.2p1_0286F.1_g113970' => 'hma', 'Hma1.2p1_0363F.1_g136640' => 'hma', 'Hma1.2p1_0584F.1_g183470' => 'hma', 'Hma1.2p1_0885F.1_g232570' => 'hma', 'HPP92_006022' => 'vpl', 'HPP92_007320' => 'vpl', 'HPP92_011521' => 'vpl', 'HPP92_019387' => 'vpl', 'HPP92_024038' => 'vpl', 'Hund05891' => 'sun', 'Hund06450' => 'sun', 'Hund12053' => 'sun', 'Hund16800' => 'sun', 'Hund21222' => 'sun', 'Hund22896' => 'sun', 'Hund23746' => 'sun', 'Hund27083' => 'sun', 'Lalb_Chr02g0141831' => 'lal', 'Lalb_Chr02g0141841' => 'lal', 'Lalb_Chr05g0220411' => 'lal', 'Lalb_Chr06g0162081' => 'lal', 'Lalb_Chr09g0327651' => 'lal', 'Lalb_Chr13g0295051' => 'lal', 'Lalb_Chr15g0086801' => 'lal', 'Lalb_Chr16g0383781' => 'lal', 'Lalb_Chr16g0383791' => 'lal', 'Lalb_Chr18g0055441' => 'lal', 'Lalb_Chr18g0059611' => 'lal', 'Lalb_Chr20g0109661' => 'lal', 'Lalb_Chr20g0109831' => 'lal', 'Lalb_Chr20g0121871' => 'lal', 'Lalb_Chr22g0355361' => 'lal', 'Lalb_Chr25g0286371' => 'lal', 'Lj1A1187G43' => 'lonja', 'Lj1A1205T50' => 'lonja', 'Lj1A800G33' => 'lonja', 'Lj1C1187T7' => 'lonja', 'Lj1C843T11' => 'lonja', 'Lj1g0010940' => 'lja', 'Lj2A288T69' => 'lonja', 'Lj3g0024276' => 'lja', 'Lj4A47T76' => 'lonja', 'Lj4g0005805' => 'lja', 'Lj4g0006097' => 'lja', 'Lj4g0008528' => 'lja', 'Lj4g0024907' => 'lja', 'Lj5g0012472' => 'lja', 'Lj5g0018648' => 'lja', 'Lj6C789G1' => 'lonja', 'Lj6g0004000' => 'lja', 'Lj7A292G67' => 'lonja', 'Lj7A292T64' => 'lonja', 'Lj9A400T58' => 'lonja', 'Lsat_1_v5_gn_1_126181' => 'lsa', 'Lsat_1_v5_gn_4_123041' => 'lsa', 'Lsat_1_v5_gn_4_133620' => 'lsa', 'Lsat_1_v5_gn_4_53221' => 'lsa', 'Lsat_1_v5_gn_4_71961' => 'lsa', 'Lsat_1_v5_gn_7_105241' => 'lsa', 'Lsat_1_v5_gn_7_21361' => 'lsa', 'Lsat_1_v5_gn_7_28860' => 'lsa', 'Lsat_1_v5_gn_7_31260' => 'lsa', 'Lsat_1_v5_gn_8_52801' => 'lsa', 'Manes.02G191400' => 'mes', 'Manes.03G110100' => 'mes', 'Manes.04G071100' => 'mes', 'Manes.05G100500' => 'mes', 'Manes.05G164700' => 'mes', 'Manes.15G087000' => 'mes', 'Manes.15G121500' => 'mes', 'Manes.16G028300' => 'mes', 'Manes.17G046100' => 'mes', 'Manes.17G069800' => 'mes', 'Manes.18G100500' => 'mes', 'Mapoly0002s0109' => 'mpo', 'Mapoly0024s0007' => 'mpo', 'Mapoly0089s0032' => 'mpo', 'MBI04_g42241_MAGBIO' => 'mbi', 'MBI05_g11988_MAGBIO' => 'mbi', 'MBI05_g35452_MAGBIO' => 'mbi', 'MBI07_g30179_MAGBIO' => 'mbi', 'MBI07_g35859_MAGBIO' => 'mbi', 'MBI07_g35860_MAGBIO' => 'mbi', 'MBI07_g37166_MAGBIO' => 'mbi', 'MBI08_g18172_MAGBIO' => 'mbi', 'MBI09_g08441_MAGBIO' => 'mbi', 'MBI13_g01676_MAGBIO' => 'mbi', 'MBI14_g42955_MAGBIO' => 'mbi', 'MBI16_g13161_MAGBIO' => 'mbi', 'MBI17_g27204_MAGBIO' => 'mbi', 'MBI19_g21595_MAGBIO' => 'mbi', 'MD00G1148400' => 'mdo', 'MD02G1301200' => 'mdo', 'MD03G1227800' => 'mdo', 'MD05G1041100' => 'mdo', 'MD05G1124800' => 'mdo', 'MD05G1284000' => 'mdo', 'MD05G1338800' => 'mdo', 'MD05G1338900' => 'mdo', 'MD07G1022800' => 'mdo', 'MD10G1047500' => 'mdo', 'MD10G1127500' => 'mdo', 'MD10G1262300' => 'mdo', 'MD10G1293800' => 'mdo', 'MD16G1074300' => 'mdo', 'Medtr1g021670' => 'mtr', 'Medtr1g096320' => 'mtr', 'Medtr2g013690' => 'mtr', 'Medtr2g019450' => 'mtr', 'Medtr2g085170' => 'mtr', 'Medtr4g088785' => 'mtr', 'Medtr8g055930' => 'mtr', 'Medtr8g085850' => 'mtr', 'MELO3C002605.2' => 'cme', 'MELO3C003891.2' => 'cme', 'MELO3C004012.2' => 'cme', 'MELO3C007134.2' => 'cme', 'MELO3C008118.2' => 'cme', 'MELO3C016700.2' => 'cme', 'MELO3C024127.2' => 'cme', 'MELO3C033361.2' => 'cme', 'MELO3C033362.2' => 'cme', 'Migut.C00430' => 'egut', 'Migut.C01246' => 'egut', 'Migut.E00101' => 'egut', 'Migut.H01486' => 'egut', 'Migut.H01939' => 'egut', 'Migut.K00360' => 'egut', 'Migut.M00910' => 'egut', 'Migut.M01139' => 'egut', 'Migut.N02677' => 'egut', 'MSTRG.13252' => 'ama', 'MSTRG.14701' => 'ama', 'MSTRG.1521' => 'ama', 'MSTRG.15884' => 'ama', 'MSTRG.16242' => 'ama', 'MSTRG.22285' => 'ama', 'MSTRG.22444' => 'ama', 'MSTRG.2349' => 'ama', 'MSTRG.26308' => 'ama', 'MSTRG.28296' => 'ama', 'MSTRG.9895' => 'ama', 'Nitab4.5_0000110g0060' => 'nta', 'Nitab4.5_0000420g0130' => 'nta', 'Nitab4.5_0000422g0030' => 'nta', 'Nitab4.5_0000560g0180' => 'nta', 'Nitab4.5_0000703g0100' => 'nta', 'Nitab4.5_0000786g0200' => 'nta', 'Nitab4.5_0001336g0020' => 'nta', 'Nitab4.5_0001796g0030' => 'nta', 'Nitab4.5_0003348g0060' => 'nta', 'Nitab4.5_0003698g0040' => 'nta', 'Nitab4.5_0003942g0090' => 'nta', 'Nitab4.5_0004775g0070' => 'nta', 'Nitab4.5_0004864g0030' => 'nta', 'Nitab4.5_0005615g0020' => 'nta', 'Nitab4.5_0009288g0030' => 'nta', 'Nitab4.5_0009341g0010' => 'nta', 'Nitab4.5_0009535g0010' => 'nta', 'Nn1g03995' => 'nnu', 'Nn1g04100' => 'nnu', 'Nn1g06530' => 'nnu', 'Nn3g16404' => 'nnu', 'Nn3g17212' => 'nnu', 'Nn3g20776' => 'nnu', 'Nn3g21923' => 'nnu', 'Nn5g27737' => 'nnu', 'Nn5g29461' => 'nnu', 'Nn7g38355' => 'nnu', 'Nn8g39873' => 'nnu', 'Oeu000548.2' => 'oeu', 'Oeu004672.1' => 'oeu', 'Oeu015605.2' => 'oeu', 'Oeu016092.1' => 'oeu', 'Oeu017879.3' => 'oeu', 'Oeu024910.1' => 'oeu', 'Oeu028965.1' => 'oeu', 'Oeu031269.1' => 'oeu', 'Oeu031270.1' => 'oeu', 'Oeu032535.1' => 'oeu', 'Oeu034151.1' => 'oeu', 'Oeu034152.1' => 'oeu', 'Oeu034588.2' => 'oeu', 'Oeu050846.1' => 'oeu', 'Oeu050849.2' => 'oeu', 'Oeu051063.2' => 'oeu', 'Oeu052368.1' => 'oeu', 'Oeu052370.1' => 'oeu', 'Os01g0210400' => 'osa', 'Os01g0304300' => 'osa', 'Os01g0749100' => 'osa', 'Os02g0745800' => 'osa', 'Os03g0769050' => 'osa', 'Os05g0531500' => 'osa', 'Os06g0724300' => 'osa', 'Os11g0198100' => 'osa', 'Peaxi162Scf00069g01425' => 'pax', 'Peaxi162Scf00280g00811' => 'pax', 'Peaxi162Scf00310g00615' => 'pax', 'Peaxi162Scf00362g00542' => 'pax', 'Peaxi162Scf00461g00310' => 'pax', 'Peaxi162Scf00530g00118' => 'pax', 'Peaxi162Scf00541g00057' => 'pax', 'Peaxi162Scf00661g00017' => 'pax', 'Peaxi162Scf00926g00027' => 'pax', 'Peaxi162Scf01064g00263' => 'pax', 'Peaxi162Scf01211g00135' => 'pax', 'PGR004G2336' => 'pgr', 'PGR042G0327' => 'pgr', 'PGR042G1957' => 'pgr', 'PGR042G2003' => 'pgr', 'PGR042G3929' => 'pgr', 'PGR083G1137' => 'pgr', 'PGR083G1364' => 'pgr', 'PGSC0003DMG400003381' => 'stu', 'PGSC0003DMG400003417' => 'stu', 'PGSC0003DMG400008981' => 'stu', 'PGSC0003DMG400012417' => 'stu', 'PGSC0003DMG400012823' => 'stu', 'PGSC0003DMG400016885' => 'stu', 'PGSC0003DMG400022812' => 'stu', 'PGSC0003DMG400029726' => 'stu', 'PGSC0003DMG401009243' => 'stu', 'PGSC0003DMG401031505' => 'stu', 'PGSC0003DMG402031505' => 'stu', 'Phvul.001G017600' => 'pvu', 'Phvul.002G193500' => 'pvu', 'Phvul.002G228900' => 'pvu', 'Phvul.002G236800' => 'pvu', 'Phvul.003G049500' => 'pvu', 'Phvul.005G072000' => 'pvu', 'Phvul.006G164800' => 'pvu', 'Phvul.006G185100' => 'pvu', 'Phvul.007G090000' => 'pvu', 'Potri.001G399800' => 'ptr', 'Potri.002G149900' => 'ptr', 'Potri.004G044100' => 'ptr', 'Potri.004G177600' => 'ptr', 'Potri.009G138000' => 'ptr', 'Potri.010G094000' => 'ptr', 'Potri.011G053000' => 'ptr', 'Potri.011G119300' => 'ptr', 'Potri.013G113700' => 'ptr', 'Potri.018G107800' => 'ptr', 'Potri.019G084100' => 'ptr', 'Pp3c14_23720' => 'ppa', 'Pp3c16_6340' => 'ppa', 'Pp3c23_13420' => 'ppa', 'Pp3c24_2740' => 'ppa', 'Pp3c25_860' => 'ppa', 'Pp3c8_21750' => 'ppa', 'Prupe.1G273000' => 'ppe', 'Prupe.1G273700' => 'ppe', 'Prupe.1G274100' => 'ppe', 'Prupe.2G023300' => 'ppe', 'Prupe.4G048000' => 'ppe', 'Prupe.4G080400' => 'ppe', 'Prupe.4G181200' => 'ppe', 'Prupe.8G056900' => 'ppe', 'Prupe.8G168700' => 'ppe', 'Psat1g189080' => 'psa', 'Psat1g204760' => 'psa', 'Psat4g175560' => 'psa', 'Psat4g177720' => 'psa', 'Psat5g244240' => 'psa', 'Psat6g010720' => 'psa', 'Psat6g187200' => 'psa', 'Psat7g072040' => 'psa', 'PSO017G3501' => 'pso', 'PSO063G2148' => 'pso', 'PSO063G5608' => 'pso', 'PSO210G6392' => 'pso', 'PSO541G2319' => 'pso', 'PSO541G2836' => 'pso', 'PSO541G4012' => 'pso', 'PSO541G6253' => 'pso', 'PSO675G0580' => 'pso', 'PSO675G0856' => 'pso', 'PSO675G5635' => 'pso', 'PSO675G9157' => 'pso', 'PSO832G1660' => 'pso', 'PSO832G1969' => 'pso', 'QL02p007186' => 'qlo', 'QL02p033904' => 'qlo', 'QL03p064391' => 'qlo', 'QL05p040593' => 'qlo', 'QL05p058242' => 'qlo', 'QL08p021825' => 'qlo', 'QL11p004981' => 'qlo', 'RcHm_v2.0_Chr1g0318301' => 'rch', 'RcHm_v2.0_Chr4g0418501' => 'rch', 'RcHm_v2.0_Chr4g0439971' => 'rch', 'RcHm_v2.0_Chr5g0008541' => 'rch', 'RcHm_v2.0_Chr5g0014101' => 'rch', 'RcHm_v2.0_Chr5g0014131' => 'rch', 'RcHm_v2.0_Chr5g0033621' => 'rch', 'RcHm_v2.0_Chr6g0272041' => 'rch', 'RcHm_v2.0_Chr6g0278831' => 'rch', 'Rhsim02G0130400' => 'rsi', 'Rhsim02G0171100' => 'rsi', 'Rhsim05G0053000' => 'rsi', 'Rhsim05G0053100' => 'rsi', 'Rhsim06G0096500' => 'rsi', 'Rhsim06G0096600' => 'rsi', 'Rhsim06G0199100' => 'rsi', 'Rhsim12G0062300' => 'rsi', 'Rhsim12G0062800' => 'rsi', 'Sabra02G0118600' => 'sbr', 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'Solyc03g079860.2' => 'sly', 'Solyc04g079770.3' => 'sly', 'Solyc05g007430.4' => 'sly', 'Solyc07g063150.3' => 'sly', 'Solyc08g016620.3' => 'sly', 'Solyc09g057590.3' => 'sly', 'Solyc09g057600.1' => 'sly', 'Solyc10g009050.3' => 'sly', 'Solyc11g017420.2' => 'sly', 'Sopen01g053810' => 'spe', 'Sopen02g023040' => 'spe', 'Sopen03g002440' => 'spe', 'Sopen04g033350' => 'spe', 'Sopen05g003310' => 'spe', 'Sopen07g004050' => 'spe', 'Sopen07g031340' => 'spe', 'Sopen08g006990' => 'spe', 'Sopen10g004830' => 'spe', 'Sopen11g009370' => 'spe', 'Sp1g24450' => 'spa', 'Sp1g29670' => 'spa', 'Sp1g39600' => 'spa', 'Sp2g11080' => 'spa', 'Sp2g13970' => 'spa', 'Sp4g16130' => 'spa', 'Sp6g13080' => 'spa', 'Sp7g37270' => 'spa', 'TAR371G0065' => 'tar', 'TAR376G0340' => 'tar', 'TAR376G0435' => 'tar', 'TAR381G0002' => 'tar', 'TAR381G1236' => 'tar', 'TAR624G0055' => 'tar', 'TAR624G0324' => 'tar', 'TAR624G0696' => 'tar', 'TAR624G0906' => 'tar', 'TAR625G0107' => 'tar', 'TAR626G0015' => 'tar', 'TAR626G1356' => 'tar', 'TAR627G0888' => 'tar', 'TAR628G0399' => 'tar', 'TAR628G1327' => 'tar', 'TAR629G2831' => 'tar', 'TAR629G2874' => 'tar', 'TAR633G1432' => 'tar', 'TAR633G2771' => 'tar', 'THA.LOC104803394' => 'tha', 'THA.LOC104805153' => 'tha', 'THA.LOC104806784' => 'tha', 'THA.LOC104810473' => 'tha', 'THA.LOC104813100' => 'tha', 'THA.LOC104814215' => 'tha', 'THA.LOC104815554' => 'tha', 'THA.LOC104820544' => 'tha', 'THA.LOC104824754' => 'tha', 'THA.LOC104827717' => 'tha', 'Thecc.02G031400' => 'tca', 'Thecc.02G055900' => 'tca', 'Thecc.02G350800' => 'tca', 'Thecc.06G150900' => 'tca', 'Thecc.06G186600' => 'tca', 'Thecc.07G089600' => 'tca', 'Thecc.08G020400' => 'tca', 'Thecc.08G182100' => 'tca', 'Thhalv10000873m.g' => 'esa', 'Thhalv10004185m.g' => 'esa', 'Thhalv10006981m.g' => 'esa', 'Thhalv10007204m.g' => 'esa', 'Thhalv10011374m.g' => 'esa', 'Thhalv10013482m.g' => 'esa', 'Thhalv10017801m.g' => 'esa', 'Thhalv10024983m.g' => 'esa', 'TPR.G12072' => 'tpr', 'TPR.G15769' => 'tpr', 'TPR.G16504' => 'tpr', 'TPR.G16506' => 'tpr', 'TPR.G24345' => 'tpr', 'TPR.G26666' => 'tpr', 'TPR.G27320' => 'tpr', 'TPR.G31819' => 'tpr', 'TPR.G38879' => 'tpr', 'TPR.G39015' => 'tpr', 'TPR.G8819' => 'tpr', 'TWI09G0924' => 'twi', 'TWI12G0811' => 'twi', 'TWI12G1294' => 'twi', 'TWI31G0150' => 'twi', 'TWI36G1262' => 'twi', 'TWI38G1287' => 'twi', 'TWI38G1633' => 'twi', 'TWI38G1982' => 'twi', 'TWI39G0116' => 'twi', 'TWI60G1011' => 'twi', 'TWI63G0171' => 'twi', 'TWI73G0839' => 'twi', 'TWI79G1511' => 'twi', 'unitig_0.g915' => 'ugi', 'unitig_0.g916' => 'ugi', 'unitig_21.g20219' => 'ugi', 'unitig_21.g20416' => 'ugi', 'unitig_578.g16132' => 'ugi', 'unitig_578.g16718' => 'ugi', 'unitig_62.g23481' => 'ugi', 'unitig_744.g24535' => 'ugi', 'unitig_749.g13525' => 'ugi', 'vmacro01248' => 'vma', 'vmacro02290' => 'vma', 'vmacro10946' => 'vma', 'vmacro11865' => 'vma', 'vmacro12493' => 'vma', 'vmacro17322' => 'vma', 'vmacro21599' => 'vma', 'vmacro23041' => 'vma', 'VMungo0251G0004' => 'vmu', 'VMungo0251G2639' => 'vmu', 'VMungo0251G2967' => 'vmu', 'VMungo0540G0864' => 'vmu', 'VMungo0540G1569' => 'vmu', 'VMungo0647G0317' => 'vmu', 'VMungo0720G1373' => 'vmu', 'VMungo0720G1508' => 'vmu', 'VMungo1080G0485' => 'vmu', 'VMungo1215G3177' => 'vmu', 'Zm00001eb112600' => 'zma', 'Zm00001eb120220' => 'zma', 'Zm00001eb153240' => 'zma', 'Zm00001eb168880' => 'zma', 'Zm00001eb213920' => 'zma', 'Zm00001eb228280' => 'zma', 'Zm00001eb254580' => 'zma', 'Zm00001eb272180' => 'zma', 'Zm00001eb293190' => 'zma', 'Zm00001eb322930' => 'zma', 'Zm00001eb353360' => 'zma', 'Zm00001eb353390' => 'zma', 'Zm00001eb353430' => 'zma', 'Zm00001eb353440' => 'zma', 'Zm00001eb353780' => 'zma' ), 'gf_id' => 'HOM05D000499', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000499' ), 'data_identifier' => 'HOM05D000499', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000499', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1066', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p29780' => 'bna', 'A02p33180' => 'bna', 'A03p16470' => 'bna', 'A03p66010' => 'bna', 'A04p25970' => 'bna', 'A06p01270' => 'bna', 'A06p46080' => 'bna', 'A07p11400' => 'bna', 'A08p01840' => 'bna', 'A08p08230' => 'bna', 'A08p25740' => 'bna', 'A09p32070' => 'bna', 'A09p37830' => 'bna', 'A09p42840' => 'bna', 'A09p42850' => 'bna', 'Aa31LG10G2060' => 'aar', 'Aa31LG2G7410' => 'aar', 'Aa31LG6G10200' => 'aar', 'Aa31LG6G16680' => 'aar', 'Aa31LG6G8470' => 'aar', 'Aa31LG9G12730' => 'aar', 'Aa31LG9G13680' => 'aar', 'Aa31LG9G14920' => 'aar', 'Aa31LG9G6650' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4977' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5467' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3254' => 'aag', 'Actinidia02578' => 'ach', 'Actinidia07693' => 'ach', 'Actinidia08413' => 'ach', 'Actinidia08414' => 'ach', 'Actinidia15289' => 'ach', 'Actinidia19871' => 'ach', 'Actinidia21475' => 'ach', 'Actinidia22576' => 'ach', 'Actinidia28327' => 'ach', 'Actinidia32491' => 'ach', 'Actinidia39463' => 'ach', 'Actinidia39571' => 'ach', 'Ah.01g013750' => 'amhyb', 'Ah.01g023210' => 'amhyb', 'Ah.04g164850' => 'amhyb', 'Ah.05g178060' => 'amhyb', 'Ah.07g204270' => 'amhyb', 'Ah.07g208480' => 'amhyb', 'Ah.09g237410' => 'amhyb', 'Ah.14g089460' => 'amhyb', 'AL1G41790' => 'aly', 'AL1G49050' => 'aly', 'AL1G53810' => 'aly', 'AL1G61400' => 'aly', 'AL4G18580' => 'aly', 'AL5G12510' => 'aly', 'AL5G12540' => 'aly', 'AL6G43230' => 'aly', 'AL7G10370' => 'aly', 'AL7G19250' => 'aly', 'AL8G12240' => 'aly', 'AL8G18540' => 'aly', 'Aqoxy1G02409' => 'aox', 'Aqoxy2G03993' => 'aox', 'Aqoxy3G03357' => 'aox', 'Aqoxy4G00785' => 'aox', 'Aqoxy5G02598' => 'aox', 'Aqoxy6G00132' => 'aox', 'Aqoxy7G01776' => 'aox', 'Aqoxy7G02316' => 'aox', 'Aqoxy7G03973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.12AFKW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B8730' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27IQR1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3F75VG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3RE0GA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41TCQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.527VTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FIR39' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5W8UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DA38EV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ63HS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H1I32C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HC27T5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4M8AP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7N3CZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9UVDZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LS1NQA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT1D4B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SKC4TM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCFV76' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF9Q1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQWD9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1ZM88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WE07RT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YCK7VH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJE6Q6' => 'arhy', 'AT1G28240' => 'ath', 'AT1G34550' => 'ath', 'AT1G53040' => 'ath', 'AT2G02910' => 'ath', 'AT4G09630' => 'ath', 'AT4G38500' => 'ath', 'AT5G42660' => 'ath', 'AT5G46220' => 'ath', 'ATR0152G026' => 'atr', 'ATR0564G343' => 'atr', 'ATR0706G151' => 'atr', 'ATR0733G207' => 'atr', 'ATR0751G234' => 'atr', 'ATR0807G048' => 'atr', 'ATR1091G084' => 'atr', 'Atru.chr10.1229' => 'acertr', 'Atru.chr10.1230' => 'acertr', 'Atru.chr10.1874' => 'acertr', 'Atru.chr11.1808' => 'acertr', 'Atru.chr13.1795' => 'acertr', 'Atru.chr13.570' => 'acertr', 'Atru.chr2.2608' => 'acertr', 'Atru.chr2.2609' => 'acertr', 'Atru.chr5.3428' => 'acertr', 'Atru.chr8.1171' => 'acertr', 'AUR62004651' => 'cqu', 'AUR62008675' => 'cqu', 'AUR62010014' => 'cqu', 'AUR62013004' => 'cqu', 'AUR62014825' => 'cqu', 'AUR62015015' => 'cqu', 'AUR62015151' => 'cqu', 'AUR62017020' => 'cqu', 'AUR62019422' => 'cqu', 'AUR62023570' => 'cqu', 'AUR62025571' => 'cqu', 'AUR62029098' => 'cqu', 'AUR62033863' => 'cqu', 'AUR62034296' => 'cqu', 'AUR62040075' => 'cqu', 'BcaB02g07334' => 'bca', 'BcaB02g10575' => 'bca', 'BcaB03g12119' => 'bca', 'BcaB03g12120' => 'bca', 'BcaB03g13945' => 'bca', 'BcaB04g17123' => 'bca', 'BcaB04g17867' => 'bca', 'BcaB04g19839' => 'bca', 'BcaB07g30317' => 'bca', 'BcaB07g32432' => 'bca', 'BcaB07g33362' => 'bca', 'BcaB08g36611' => 'bca', 'BcaC01g00028' => 'bca', 'BcaC01g01356' => 'bca', 'BcaC01g02034' => 'bca', 'BcaC01g06051' => 'bca', 'BcaC03g16839' => 'bca', 'BcaC03g17176' => 'bca', 'BcaC05g26829' => 'bca', 'BcaC06g31490' => 'bca', 'BcaC06g35344' => 'bca', 'BcaC06g36570' => 'bca', 'BcaC07g37537' => 'bca', 'BcaC08g43491' => 'bca', 'BcaC08g43773' => 'bca', 'BcaNung00234' => 'bca', 'BcaNung01982' => 'bca', 'BcaNung03707' => 'bca', 'BcaNung06454' => 'bca', 'BolC2t10762H' => 'bol', 'BolC2t11191H' => 'bol', 'BolC3t14322H' => 'bol', 'BolC3t19747H' => 'bol', 'BolC3t21425H' => 'bol', 'BolC4t27800H' => 'bol', 'BolC5t31423H' => 'bol', 'BolC6t35951H' => 'bol', 'BolC6t36282H' => 'bol', 'BolC7t40678H' => 'bol', 'BolC7t40679H' => 'bol', 'BolC7t42222H' => 'bol', 'BolC7t43492H' => 'bol', 'BolC7t46785H' => 'bol', 'BolC8t47853H' => 'bol', 'BolC9t56805H' => 'bol', 'BraA02t08000Z' => 'bra', 'BraA02t08341Z' => 'bra', 'BraA03t10936Z' => 'bra', 'BraA03t15657Z' => 'bra', 'BraA04t18100Z' => 'bra', 'BraA05t20523Z' => 'bra', 'BraA06t23353Z' => 'bra', 'BraA06t27473Z' => 'bra', 'BraA06t27769Z' => 'bra', 'BraA07t28928Z' => 'bra', 'BraA08t32236Z' => 'bra', 'BraA08t32841Z' => 'bra', 'BraA08t34524Z' => 'bra', 'BraA09t38742Z' => 'bra', 'BraA09t39295Z' => 'bra', 'C02p47180' => 'bna', 'C02p50990' => 'bna', 'C03p19360' => 'bna', 'C03p74950' => 'bna', 'C03p91000' => 'bna', 'C04p63260' => 'bna', 'C05p27050' => 'bna', 'C06p08750' => 'bna', 'C06p11490' => 'bna', 'C07p02820' => 'bna', 'C07p17180' => 'bna', 'C07p29440' => 'bna', 'C07p63730' => 'bna', 'C09p39260' => 'bna', 'CAN.G1164.34' => 'can', 'CAN.G1164.39' => 'can', 'CAN.G1530.3' => 'can', 'CAN.G162.61' => 'can', 'CAN.G176.6' => 'can', 'CAN.G289.49' => 'can', 'CAN.G370.21' => 'can', 'CAN.G370.22' => 'can', 'CAN.G371.117' => 'can', 'CAN.G58.37' => 'can', 'CAN.G588.98' => 'can', 'CANSAT21G2266' => 'cansat', 'CANSAT25G2799' => 'cansat', 'CANSAT35G0862' => 'cansat', 'CANSAT35G1704' => 'cansat', 'CANSAT35G1760' => 'cansat', 'CANSAT56G3971' => 'cansat', 'CANSAT56G4116' => 'cansat', 'CANSAT80G1259' => 'cansat', 'CARHR027730' => 'chi', 'CARHR033880' => 'chi', 'CARHR043270' => 'chi', 'CARHR145330' => 'chi', 'CARHR145340' => 'chi', 'CARHR175570' => 'chi', 'CARHR181570' => 'chi', 'CARHR258470' => 'chi', 'CARHR260490' => 'chi', 'CARHR294220' => 'chi', 'Carub.0001s2668' => 'cru', 'Carub.0001s3257' => 'cru', 'Carub.0001s4220' => 'cru', 'Carub.0005s0179' => 'cru', 'Carub.0006s2807' => 'cru', 'Carub.0007s0039' => 'cru', 'Carub.0008s0169' => 'cru', 'Carub.0008s0636' => 'cru', 'Ca_00338_v3' => 'car', 'Ca_00542_v3' => 'car', 'Ca_01844_v3' => 'car', 'Ca_10611_v3' => 'car', 'Ca_13326_v3' => 'car', 'Ca_17944_v3' => 'car', 'Ca_18546_v3' => 'car', 'Ca_24219_v3' => 'car', 'Ca_29972_v3' => 'car', 'CBR_g3681' => 'cbr', 'CBR_g40021' => 'cbr', 'Cc01_g08140' => 'ccan', 'Cc02_g13410' => 'ccan', 'Cc02_g37480' => 'ccan', 'Cc05_g12030' => 'ccan', 'Cc09_g03370' => 'ccan', 'Cc09_g10300' => 'ccan', 'Cc10_g03530' => 'ccan', 'Cc10_g11380' => 'ccan', 'CDE01G0176' => 'cde', 'CDE02G0675' => 'cde', 'CDE02G0942' => 'cde', 'CDE02G1153' => 'cde', 'CDE02G4177' => 'cde', 'CDE04G2117' => 'cde', 'CDE04G2736' => 'cde', 'CDE08G1161' => 'cde', 'CDE09G1238' => 'cde', 'Cfa000467' => 'cfa', 'Cfa000947' => 'cfa', 'Cfa004969' => 'cfa', 'Cfa005284' => 'cfa', 'Cfa008993' => 'cfa', 'Cfa018187' => 'cfa', 'Cfa018454' => 'cfa', 'Cfa020585' => 'cfa', 'Ciclev10000424m.g' => 'ccl', 'Ciclev10003605m.g' => 'ccl', 'Ciclev10007828m.g' => 'ccl', 'Ciclev10014620m.g' => 'ccl', 'Ciclev10015169m.g' => 'ccl', 'Ciclev10018291m.g' => 'ccl', 'Ciclev10028256m.g' => 'ccl', 'Ciclev10033822m.g' => 'ccl', 'CiPaw.05G060300' => 'cil', 'CiPaw.05G085000' => 'cil', 'CiPaw.06G083700' => 'cil', 'CiPaw.06G120300' => 'cil', 'CiPaw.09G060500' => 'cil', 'CiPaw.09G123800' => 'cil', 'CiPaw.11G169700' => 'cil', 'CiPaw.12G118300' => 'cil', 'CiPaw.15G071000' => 'cil', 'CiPaw.15G081900' => 'cil', 'ClCG01G024610' => 'cla', 'ClCG03G006070' => 'cla', 'ClCG05G019250' => 'cla', 'ClCG09G009500' => 'cla', 'ClCG11G008200' => 'cla', 'ClCG11G018080' => 'cla', 'COL.COLO4_17373' => 'col', 'COL.COLO4_22994' => 'col', 'COL.COLO4_26389' => 'col', 'COL.COLO4_27170' => 'col', 'COL.COLO4_31074' => 'col', 'COL.COLO4_31465' => 'col', 'COL.COLO4_36438' => 'col', 'COL.COLO4_36439' => 'col', 'Cpa.g.c38781' => 'cpa', 'Cpa.g.sc128.12' => 'cpa', 'Cpa.g.sc166.7' => 'cpa', 'Cpa.g.sc166.8' => 'cpa', 'Cpa.g.sc20.111' => 'cpa', 'Cpa.g.sc27.31' => 'cpa', 'Cpa.g.sc64.36' => 'cpa', 'Cpa.g.sc64.37' => 'cpa', 'Cpa.g.sc66.49' => 'cpa', 'Cpa.g.sc80.64' => 'cpa', 'CsaV3_1G012320' => 'csa', 'CsaV3_2G008480' => 'csa', 'CsaV3_2G033450' => 'csa', 'CsaV3_3G044830' => 'csa', 'CsaV3_4G033710' => 'csa', 'CsaV3_6G051730' => 'csa', 'CsaV3_7G025350' => 'csa', 'CSS0001067' => 'camsi', 'CSS0005996' => 'camsi', 'CSS0006590' => 'camsi', 'CSS0009673' => 'camsi', 'CSS0010201' => 'camsi', 'CSS0010549' => 'camsi', 'CSS0011364' => 'camsi', 'CSS0014473' => 'camsi', 'CSS0014961' => 'camsi', 'CSS0020191' => 'camsi', 'CSS0021165' => 'camsi', 'CSS0022306' => 'camsi', 'CSS0030591' => 'camsi', 'CSS0030696' => 'camsi', 'CSS0032653' => 'camsi', 'CSS0037487' => 'camsi', 'CSS0041102' => 'camsi', 'CSS0041261' => 'camsi', 'CSS0046246' => 'camsi', 'CSS0049256' => 'camsi', 'DCAR_004075' => 'dca', 'DCAR_011538' => 'dca', 'DCAR_019553' => 'dca', 'DCAR_020952' => 'dca', 'DCAR_021739' => 'dca', 'DCAR_027407' => 'dca', 'DCAR_027913' => 'dca', 'DCAR_028066' => 'dca', 'Dinv05899' => 'din', 'Dinv07563' => 'din', 'Dinv08010' => 'din', 'Dinv14125' => 'din', 'Dinv20172' => 'din', 'Dinv30743' => 'din', 'Dinv31229' => 'din', 'Dinv34162' => 'din', 'Dinv36028' => 'din', 'Dinv39368' => 'din', 'Dinv40565' => 'din', 'Dinv41706' => 'din', 'Duzib052G0089' => 'dzi', 'Duzib116G0641' => 'dzi', 'Duzib132G0069' => 'dzi', 'Duzib132G1219' => 'dzi', 'Duzib147G0278' => 'dzi', 'Duzib160G0480' => 'dzi', 'Duzib170G0661' => 'dzi', 'Duzib177G0591' => 'dzi', 'Duzib187G1353' => 'dzi', 'Duzib192G0858' => 'dzi', 'Duzib192G0883' => 'dzi', 'Duzib213G0506' => 'dzi', 'Duzib235G0289' => 'dzi', 'Duzib251G0422' => 'dzi', 'ECA232G3898' => 'eca', 'ECA233G5950' => 'eca', 'ECA234G1699' => 'eca', 'ECA234G2421' => 'eca', 'ECA236G0426' => 'eca', 'ECA236G4331' => 'eca', 'ECA248G2573' => 'eca', 'EL10Ac1g00077' => 'bvu', 'EL10Ac1g01746' => 'bvu', 'EL10Ac2g03464' => 'bvu', 'EL10Ac4g08176' => 'bvu', 'EL10Ac7g17521' => 'bvu', 'EL10Ac8g20386' => 'bvu', 'EL10Ac9g21343' => 'bvu', 'EL10Ac9g22688' => 'bvu', 'Eucgr.B03434' => 'egr', 'Eucgr.D00618' => 'egr', 'Eucgr.E02395' => 'egr', 'Eucgr.F01129' => 'egr', 'Eucgr.F02622' => 'egr', 'Eucgr.F04207' => 'egr', 'FAN01G0570' => 'fan', 'FAN03G3351' => 'fan', 'FAN06G3702' => 'fan', 'FAN07G2149' => 'fan', 'FAN10G3758' => 'fan', 'FAN11G1170' => 'fan', 'FAN11G2050' => 'fan', 'FAN11G2724' => 'fan', 'FAN12G1700' => 'fan', 'FAN12G2028' => 'fan', 'FAN15G1160' => 'fan', 'FAN15G3063' => 'fan', 'FAN16G2540' => 'fan', 'FAN16G3077' => 'fan', 'FAN16G3624' => 'fan', 'FAN17G0221' => 'fan', 'FAN20G2492' => 'fan', 'FAN20G2905' => 'fan', 'FAN21G0548' => 'fan', 'FAN21G1300' => 'fan', 'FAN22G0077' => 'fan', 'FAN22G1315' => 'fan', 'FAN24G1280' => 'fan', 'FAN24G1445' => 'fan', 'FAN24G3527' => 'fan', 'FAN25G0464' => 'fan', 'FAN25G2885' => 'fan', 'FAN25G3270' => 'fan', 'FAN27G1101' => 'fan', 'FAN27G2846' => 'fan', 'FAN27G3524' => 'fan', 'FvH4_2g11770' => 'fve', 'FvH4_2g15630' => 'fve', 'FvH4_3g05570' => 'fve', 'FvH4_3g09110' => 'fve', 'FvH4_3g19940' => 'fve', 'FvH4_4g04821' => 'fve', 'FvH4_4g31480' => 'fve', 'FvH4_7g01740' => 'fve', 'Glyma.05G130400' => 'gma', 'Glyma.05G156400' => 'gma', 'Glyma.07G197000' => 'gma', 'Glyma.08G085151' => 'gma', 'Glyma.08G114500' => 'gma', 'Glyma.08G300400' => 'gma', 'Glyma.10G215800' => 'gma', 'Glyma.12G224400' => 'gma', 'Glyma.13G179300' => 'gma', 'Glyma.13G218151' => 'gma', 'Glyma.13G238800' => 'gma', 'Glyma.13G276900' => 'gma', 'Glyma.14G078200' => 'gma', 'Glyma.15G074500' => 'gma', 'Glyma.15G094100' => 'gma', 'Glyma.17G247200' => 'gma', 'Glyma.18G120100' => 'gma', 'Glyma.20G176000' => 'gma', 'Gohir.A01G063600' => 'ghi', 'Gohir.A01G170301' => 'ghi', 'Gohir.A02G060500' => 'ghi', 'Gohir.A05G133850' => 'ghi', 'Gohir.A05G161400' => 'ghi', 'Gohir.A06G012900' => 'ghi', 'Gohir.A06G035901' => 'ghi', 'Gohir.A06G127100' => 'ghi', 'Gohir.A06G210500' => 'ghi', 'Gohir.A08G008650' => 'ghi', 'Gohir.A09G072700' => 'ghi', 'Gohir.A09G088301' => 'ghi', 'Gohir.A10G040600' => 'ghi', 'Gohir.A12G036300' => 'ghi', 'Gohir.A12G143350' => 'ghi', 'Gohir.A12G165500' => 'ghi', 'Gohir.A13G145700' => 'ghi', 'Gohir.D01G050000' => 'ghi', 'Gohir.D01G051366' => 'ghi', 'Gohir.D01G161350' => 'ghi', 'Gohir.D02G065900' => 'ghi', 'Gohir.D05G164200' => 'ghi', 'Gohir.D05G355500' => 'ghi', 'Gohir.D06G010400' => 'ghi', 'Gohir.D06G111250' => 'ghi', 'Gohir.D06G132000' => 'ghi', 'Gohir.D06G210500' => 'ghi', 'Gohir.D07G165675' => 'ghi', 'Gohir.D08G062240' => 'ghi', 'Gohir.D08G086101' => 'ghi', 'Gohir.D08G138060' => 'ghi', 'Gohir.D09G072300' => 'ghi', 'Gohir.D10G041400' => 'ghi', 'Gohir.D11G191020' => 'ghi', 'Gohir.D11G212066' => 'ghi', 'Gohir.D12G036300' => 'ghi', 'Gohir.D12G168600' => 'ghi', 'Gohir.D13G150600' => 'ghi', 'Gorai.001G057300' => 'gra', 'Gorai.002G069900' => 'gra', 'Gorai.002G200000' => 'gra', 'Gorai.003G067600' => 'gra', 'Gorai.005G074800' => 'gra', 'Gorai.006G087300' => 'gra', 'Gorai.008G037500' => 'gra', 'Gorai.008G181400' => 'gra', 'Gorai.009G169400' => 'gra', 'Gorai.009G387900' => 'gra', 'Gorai.010G013300' => 'gra', 'Gorai.010G153800' => 'gra', 'Gorai.010G255800' => 'gra', 'Gorai.011G043700' => 'gra', 'Gorai.011G198900' => 'gra', 'Gorai.013G168400' => 'gra', 'GSVIVG01005212001' => 'vvi', 'GSVIVG01006163001' => 'vvi', 'GSVIVG01009625001' => 'vvi', 'GSVIVG01014338001' => 'vvi', 'GSVIVG01020005001' => 'vvi', 'GSVIVG01021450001' => 'vvi', 'GSVIVG01023975001' => 'vvi', 'GSVIVG01034490001' => 'vvi', 'HanXRQChr04g0112071' => 'han', 'HanXRQChr05g0131151' => 'han', 'HanXRQChr09g0262371' => 'han', 'HanXRQChr09g0268401' => 'han', 'HanXRQChr10g0279241' => 'han', 'HanXRQChr10g0297961' => 'han', 'HanXRQChr11g0326231' => 'han', 'HanXRQChr11g0328471' => 'han', 'HanXRQChr16g0507941' => 'han', 'HanXRQChr17g0560211' => 'han', 'Haze_02108' => 'cav', 'Haze_02428' => 'cav', 'Haze_05593' => 'cav', 'Haze_06448' => 'cav', 'Haze_09427' => 'cav', 'Haze_12022' => 'cav', 'Haze_17612' => 'cav', 'Haze_17928' => 'cav', 'Hma1.2p1_0032F.1_g019250' => 'hma', 'Hma1.2p1_0163F.1_g072690' => 'hma', 'Hma1.2p1_0265F.1_g106710' => 'hma', 'Hma1.2p1_0286F.1_g113970' => 'hma', 'Hma1.2p1_0363F.1_g136640' => 'hma', 'Hma1.2p1_0584F.1_g183470' => 'hma', 'Hma1.2p1_0885F.1_g232570' => 'hma', 'HPP92_006022' => 'vpl', 'HPP92_007320' => 'vpl', 'HPP92_011521' => 'vpl', 'HPP92_019387' => 'vpl', 'HPP92_024038' => 'vpl', 'Hund05891' => 'sun', 'Hund06450' => 'sun', 'Hund12053' => 'sun', 'Hund16800' => 'sun', 'Hund21222' => 'sun', 'Hund22896' => 'sun', 'Hund23746' => 'sun', 'Hund27083' => 'sun', 'Lalb_Chr02g0141831' => 'lal', 'Lalb_Chr02g0141841' => 'lal', 'Lalb_Chr05g0220411' => 'lal', 'Lalb_Chr06g0162081' => 'lal', 'Lalb_Chr09g0327651' => 'lal', 'Lalb_Chr13g0295051' => 'lal', 'Lalb_Chr15g0086801' => 'lal', 'Lalb_Chr16g0383781' => 'lal', 'Lalb_Chr16g0383791' => 'lal', 'Lalb_Chr18g0055441' => 'lal', 'Lalb_Chr18g0059611' => 'lal', 'Lalb_Chr20g0109661' => 'lal', 'Lalb_Chr20g0109831' => 'lal', 'Lalb_Chr20g0121871' => 'lal', 'Lalb_Chr22g0355361' => 'lal', 'Lalb_Chr25g0286371' => 'lal', 'Lj1A1187G43' => 'lonja', 'Lj1A1205T50' => 'lonja', 'Lj1A800G33' => 'lonja', 'Lj1C1187T7' => 'lonja', 'Lj1C843T11' => 'lonja', 'Lj1g0010940' => 'lja', 'Lj2A288T69' => 'lonja', 'Lj3g0024276' => 'lja', 'Lj4A47T76' => 'lonja', 'Lj4g0005805' => 'lja', 'Lj4g0006097' => 'lja', 'Lj4g0008528' => 'lja', 'Lj4g0024907' => 'lja', 'Lj5g0012472' => 'lja', 'Lj5g0018648' => 'lja', 'Lj6C789G1' => 'lonja', 'Lj6g0004000' => 'lja', 'Lj7A292G67' => 'lonja', 'Lj7A292T64' => 'lonja', 'Lj9A400T58' => 'lonja', 'Lsat_1_v5_gn_1_126181' => 'lsa', 'Lsat_1_v5_gn_4_123041' => 'lsa', 'Lsat_1_v5_gn_4_133620' => 'lsa', 'Lsat_1_v5_gn_4_53221' => 'lsa', 'Lsat_1_v5_gn_4_71961' => 'lsa', 'Lsat_1_v5_gn_7_105241' => 'lsa', 'Lsat_1_v5_gn_7_21361' => 'lsa', 'Lsat_1_v5_gn_7_28860' => 'lsa', 'Lsat_1_v5_gn_7_31260' => 'lsa', 'Lsat_1_v5_gn_8_52801' => 'lsa', 'Manes.02G191400' => 'mes', 'Manes.03G110100' => 'mes', 'Manes.04G071100' => 'mes', 'Manes.05G100500' => 'mes', 'Manes.05G164700' => 'mes', 'Manes.15G087000' => 'mes', 'Manes.15G121500' => 'mes', 'Manes.16G028300' => 'mes', 'Manes.17G046100' => 'mes', 'Manes.17G069800' => 'mes', 'Manes.18G100500' => 'mes', 'Mapoly0002s0109' => 'mpo', 'Mapoly0024s0007' => 'mpo', 'Mapoly0089s0032' => 'mpo', 'MBI04_g42241_MAGBIO' => 'mbi', 'MBI05_g11988_MAGBIO' => 'mbi', 'MBI05_g35452_MAGBIO' => 'mbi', 'MBI07_g30179_MAGBIO' => 'mbi', 'MBI07_g35859_MAGBIO' => 'mbi', 'MBI07_g35860_MAGBIO' => 'mbi', 'MBI07_g37166_MAGBIO' => 'mbi', 'MBI08_g18172_MAGBIO' => 'mbi', 'MBI09_g08441_MAGBIO' => 'mbi', 'MBI13_g01676_MAGBIO' => 'mbi', 'MBI14_g42955_MAGBIO' => 'mbi', 'MBI16_g13161_MAGBIO' => 'mbi', 'MBI17_g27204_MAGBIO' => 'mbi', 'MBI19_g21595_MAGBIO' => 'mbi', 'MD00G1148400' => 'mdo', 'MD02G1301200' => 'mdo', 'MD03G1227800' => 'mdo', 'MD05G1041100' => 'mdo', 'MD05G1124800' => 'mdo', 'MD05G1284000' => 'mdo', 'MD05G1338800' => 'mdo', 'MD05G1338900' => 'mdo', 'MD07G1022800' => 'mdo', 'MD10G1047500' => 'mdo', 'MD10G1127500' => 'mdo', 'MD10G1262300' => 'mdo', 'MD10G1293800' => 'mdo', 'MD16G1074300' => 'mdo', 'Medtr1g021670' => 'mtr', 'Medtr1g096320' => 'mtr', 'Medtr2g013690' => 'mtr', 'Medtr2g019450' => 'mtr', 'Medtr2g085170' => 'mtr', 'Medtr4g088785' => 'mtr', 'Medtr8g055930' => 'mtr', 'Medtr8g085850' => 'mtr', 'MELO3C002605.2' => 'cme', 'MELO3C003891.2' => 'cme', 'MELO3C004012.2' => 'cme', 'MELO3C007134.2' => 'cme', 'MELO3C008118.2' => 'cme', 'MELO3C016700.2' => 'cme', 'MELO3C024127.2' => 'cme', 'MELO3C033361.2' => 'cme', 'MELO3C033362.2' => 'cme', 'Migut.C00430' => 'egut', 'Migut.C01246' => 'egut', 'Migut.E00101' => 'egut', 'Migut.H01486' => 'egut', 'Migut.H01939' => 'egut', 'Migut.K00360' => 'egut', 'Migut.M00910' => 'egut', 'Migut.M01139' => 'egut', 'Migut.N02677' => 'egut', 'MSTRG.13252' => 'ama', 'MSTRG.14701' => 'ama', 'MSTRG.1521' => 'ama', 'MSTRG.15884' => 'ama', 'MSTRG.16242' => 'ama', 'MSTRG.22285' => 'ama', 'MSTRG.22444' => 'ama', 'MSTRG.2349' => 'ama', 'MSTRG.26308' => 'ama', 'MSTRG.28296' => 'ama', 'MSTRG.9895' => 'ama', 'Nitab4.5_0000110g0060' => 'nta', 'Nitab4.5_0000420g0130' => 'nta', 'Nitab4.5_0000422g0030' => 'nta', 'Nitab4.5_0000560g0180' => 'nta', 'Nitab4.5_0000703g0100' => 'nta', 'Nitab4.5_0000786g0200' => 'nta', 'Nitab4.5_0001336g0020' => 'nta', 'Nitab4.5_0001796g0030' => 'nta', 'Nitab4.5_0003348g0060' => 'nta', 'Nitab4.5_0003698g0040' => 'nta', 'Nitab4.5_0003942g0090' => 'nta', 'Nitab4.5_0004775g0070' => 'nta', 'Nitab4.5_0004864g0030' => 'nta', 'Nitab4.5_0005615g0020' => 'nta', 'Nitab4.5_0009288g0030' => 'nta', 'Nitab4.5_0009341g0010' => 'nta', 'Nitab4.5_0009535g0010' => 'nta', 'Nn1g03995' => 'nnu', 'Nn1g04100' => 'nnu', 'Nn1g06530' => 'nnu', 'Nn3g16404' => 'nnu', 'Nn3g17212' => 'nnu', 'Nn3g20776' => 'nnu', 'Nn3g21923' => 'nnu', 'Nn5g27737' => 'nnu', 'Nn5g29461' => 'nnu', 'Nn7g38355' => 'nnu', 'Nn8g39873' => 'nnu', 'Oeu000548.2' => 'oeu', 'Oeu004672.1' => 'oeu', 'Oeu015605.2' => 'oeu', 'Oeu016092.1' => 'oeu', 'Oeu017879.3' => 'oeu', 'Oeu024910.1' => 'oeu', 'Oeu028965.1' => 'oeu', 'Oeu031269.1' => 'oeu', 'Oeu031270.1' => 'oeu', 'Oeu032535.1' => 'oeu', 'Oeu034151.1' => 'oeu', 'Oeu034152.1' => 'oeu', 'Oeu034588.2' => 'oeu', 'Oeu050846.1' => 'oeu', 'Oeu050849.2' => 'oeu', 'Oeu051063.2' => 'oeu', 'Oeu052368.1' => 'oeu', 'Oeu052370.1' => 'oeu', 'Os01g0210400' => 'osa', 'Os01g0304300' => 'osa', 'Os01g0749100' => 'osa', 'Os02g0745800' => 'osa', 'Os03g0769050' => 'osa', 'Os05g0531500' => 'osa', 'Os06g0724300' => 'osa', 'Os11g0198100' => 'osa', 'Peaxi162Scf00069g01425' => 'pax', 'Peaxi162Scf00280g00811' => 'pax', 'Peaxi162Scf00310g00615' => 'pax', 'Peaxi162Scf00362g00542' => 'pax', 'Peaxi162Scf00461g00310' => 'pax', 'Peaxi162Scf00530g00118' => 'pax', 'Peaxi162Scf00541g00057' => 'pax', 'Peaxi162Scf00661g00017' => 'pax', 'Peaxi162Scf00926g00027' => 'pax', 'Peaxi162Scf01064g00263' => 'pax', 'Peaxi162Scf01211g00135' => 'pax', 'PGR004G2336' => 'pgr', 'PGR042G0327' => 'pgr', 'PGR042G1957' => 'pgr', 'PGR042G2003' => 'pgr', 'PGR042G3929' => 'pgr', 'PGR083G1137' => 'pgr', 'PGR083G1364' => 'pgr', 'PGSC0003DMG400003381' => 'stu', 'PGSC0003DMG400003417' => 'stu', 'PGSC0003DMG400008981' => 'stu', 'PGSC0003DMG400012417' => 'stu', 'PGSC0003DMG400012823' => 'stu', 'PGSC0003DMG400016885' => 'stu', 'PGSC0003DMG400022812' => 'stu', 'PGSC0003DMG400029726' => 'stu', 'PGSC0003DMG401009243' => 'stu', 'PGSC0003DMG401031505' => 'stu', 'PGSC0003DMG402031505' => 'stu', 'Phvul.001G017600' => 'pvu', 'Phvul.002G193500' => 'pvu', 'Phvul.002G228900' => 'pvu', 'Phvul.002G236800' => 'pvu', 'Phvul.003G049500' => 'pvu', 'Phvul.005G072000' => 'pvu', 'Phvul.006G164800' => 'pvu', 'Phvul.006G185100' => 'pvu', 'Phvul.007G090000' => 'pvu', 'Potri.001G399800' => 'ptr', 'Potri.002G149900' => 'ptr', 'Potri.004G044100' => 'ptr', 'Potri.004G177600' => 'ptr', 'Potri.009G138000' => 'ptr', 'Potri.010G094000' => 'ptr', 'Potri.011G053000' => 'ptr', 'Potri.011G119300' => 'ptr', 'Potri.013G113700' => 'ptr', 'Potri.018G107800' => 'ptr', 'Potri.019G084100' => 'ptr', 'Pp3c14_23720' => 'ppa', 'Pp3c16_6340' => 'ppa', 'Pp3c23_13420' => 'ppa', 'Pp3c24_2740' => 'ppa', 'Pp3c25_860' => 'ppa', 'Pp3c8_21750' => 'ppa', 'Prupe.1G273000' => 'ppe', 'Prupe.1G273700' => 'ppe', 'Prupe.1G274100' => 'ppe', 'Prupe.2G023300' => 'ppe', 'Prupe.4G048000' => 'ppe', 'Prupe.4G080400' => 'ppe', 'Prupe.4G181200' => 'ppe', 'Prupe.8G056900' => 'ppe', 'Prupe.8G168700' => 'ppe', 'Psat1g189080' => 'psa', 'Psat1g204760' => 'psa', 'Psat4g175560' => 'psa', 'Psat4g177720' => 'psa', 'Psat5g244240' => 'psa', 'Psat6g010720' => 'psa', 'Psat6g187200' => 'psa', 'Psat7g072040' => 'psa', 'PSO017G3501' => 'pso', 'PSO063G2148' => 'pso', 'PSO063G5608' => 'pso', 'PSO210G6392' => 'pso', 'PSO541G2319' => 'pso', 'PSO541G2836' => 'pso', 'PSO541G4012' => 'pso', 'PSO541G6253' => 'pso', 'PSO675G0580' => 'pso', 'PSO675G0856' => 'pso', 'PSO675G5635' => 'pso', 'PSO675G9157' => 'pso', 'PSO832G1660' => 'pso', 'PSO832G1969' => 'pso', 'QL02p007186' => 'qlo', 'QL02p033904' => 'qlo', 'QL03p064391' => 'qlo', 'QL05p040593' => 'qlo', 'QL05p058242' => 'qlo', 'QL08p021825' => 'qlo', 'QL11p004981' => 'qlo', 'RcHm_v2.0_Chr1g0318301' => 'rch', 'RcHm_v2.0_Chr4g0418501' => 'rch', 'RcHm_v2.0_Chr4g0439971' => 'rch', 'RcHm_v2.0_Chr5g0008541' => 'rch', 'RcHm_v2.0_Chr5g0014101' => 'rch', 'RcHm_v2.0_Chr5g0014131' => 'rch', 'RcHm_v2.0_Chr5g0033621' => 'rch', 'RcHm_v2.0_Chr6g0272041' => 'rch', 'RcHm_v2.0_Chr6g0278831' => 'rch', 'Rhsim02G0130400' => 'rsi', 'Rhsim02G0171100' => 'rsi', 'Rhsim05G0053000' => 'rsi', 'Rhsim05G0053100' => 'rsi', 'Rhsim06G0096500' => 'rsi', 'Rhsim06G0096600' => 'rsi', 'Rhsim06G0199100' => 'rsi', 'Rhsim12G0062300' => 'rsi', 'Rhsim12G0062800' => 'rsi', 'Sabra02G0118600' => 'sbr', 'Sabra04G0027300' => 'sbr', 'Sabra04G0119500' => 'sbr', 'Sabra08G0112500' => 'sbr', 'Sabra11G0036800' => 'sbr', 'Sabra11G0103800' => 'sbr', 'Sabra13G0096300' => 'sbr', 'Sabra16G0262300' => 'sbr', 'Sabra18G0091700' => 'sbr', 'Sabra19G0095400' => 'sbr', 'SalBow6G3080' => 'sbo', 'SalBow7G1157' => 'sbo', 'SalBow7G2123' => 'sbo', 'SalBow7G2285' => 'sbo', 'SalBow7G3537' => 'sbo', 'SalBow8G2947' => 'sbo', 'SalBow8G4463' => 'sbo', 'SalBow8G5466' => 'sbo', 'Sc01g0001750' => 'sci', 'Sc02g0006640' => 'sci', 'Sc02g0006670' => 'sci', 'Sc04g0008220' => 'sci', 'Sc05g0006190' => 'sci', 'Sc08g0002760' => 'sci', 'Sc17g0006170' => 'sci', 'Sc22g0002050' => 'sci', 'Sc23g0001190' => 'sci', 'Sc24g0000980' => 'sci', 'Sed0006245' => 'sed', 'Sed0007543' => 'sed', 'Sed0009411' => 'sed', 'Sed0010765' => 'sed', 'Sed0012944' => 'sed', 'Sed0014682' => 'sed', 'Sed0016174' => 'sed', 'Sed0016796' => 'sed', 'Sed0020317' => 'sed', 'Sed0021467' => 'sed', 'SEGI_01316' => 'sgi', 'SEGI_03374' => 'sgi', 'SEGI_16265' => 'sgi', 'SEGI_18569' => 'sgi', 'SEGI_20351' => 'sgi', 'SEGI_26395' => 'sgi', 'SEGI_29469' => 'sgi', 'SEGI_34771' => 'sgi', 'SEGI_36769' => 'sgi', 'SEGI_37139' => 'sgi', 'SGA_v2.0_scaffold100G29687' => 'sas', 'SGA_v2.0_scaffold118G32472' => 'sas', 'SGA_v2.0_scaffold14G07051' => 'sas', 'SGA_v2.0_scaffold183G39845' => 'sas', 'SGA_v2.0_scaffold1G00174' => 'sas', 'SGA_v2.0_scaffold22G09714' => 'sas', 'SGA_v2.0_scaffold333G48992' => 'sas', 'SGA_v2.0_scaffold46G17491' => 'sas', 'SGA_v2.0_scaffold49G18294' => 'sas', 'SGA_v2.0_scaffold63G21658' => 'sas', 'SHI01741' => 'shi', 'SHI05771' => 'shi', 'SHI18077' => 'shi', 'SHI20525' => 'shi', 'SHI20527' => 'shi', 'SHI20528' => 'shi', 'SMO172G0185' => 'smo', 'SMO198G0020' => 'smo', 'SMO351G0006' => 'smo', 'SMO356G0118' => 'smo', 'SMO358G0296' => 'smo', 'SMO367G0079' => 'smo', 'SMO367G1277' => 'smo', 'Solyc01g014220.3' => 'sly', 'Solyc01g111770.2' => 'sly', 'Solyc02g078180.3' => 'sly', 'Solyc03g006430.3' => 'sly', 'Solyc03g006456.1' => 'sly', 'Solyc03g079860.2' => 'sly', 'Solyc04g079770.3' => 'sly', 'Solyc05g007430.4' => 'sly', 'Solyc07g063150.3' => 'sly', 'Solyc08g016620.3' => 'sly', 'Solyc09g057590.3' => 'sly', 'Solyc09g057600.1' => 'sly', 'Solyc10g009050.3' => 'sly', 'Solyc11g017420.2' => 'sly', 'Sopen01g053810' => 'spe', 'Sopen02g023040' => 'spe', 'Sopen03g002440' => 'spe', 'Sopen04g033350' => 'spe', 'Sopen05g003310' => 'spe', 'Sopen07g004050' => 'spe', 'Sopen07g031340' => 'spe', 'Sopen08g006990' => 'spe', 'Sopen10g004830' => 'spe', 'Sopen11g009370' => 'spe', 'Sp1g24450' => 'spa', 'Sp1g29670' => 'spa', 'Sp1g39600' => 'spa', 'Sp2g11080' => 'spa', 'Sp2g13970' => 'spa', 'Sp4g16130' => 'spa', 'Sp6g13080' => 'spa', 'Sp7g37270' => 'spa', 'TAR371G0065' => 'tar', 'TAR376G0340' => 'tar', 'TAR376G0435' => 'tar', 'TAR381G0002' => 'tar', 'TAR381G1236' => 'tar', 'TAR624G0055' => 'tar', 'TAR624G0324' => 'tar', 'TAR624G0696' => 'tar', 'TAR624G0906' => 'tar', 'TAR625G0107' => 'tar', 'TAR626G0015' => 'tar', 'TAR626G1356' => 'tar', 'TAR627G0888' => 'tar', 'TAR628G0399' => 'tar', 'TAR628G1327' => 'tar', 'TAR629G2831' => 'tar', 'TAR629G2874' => 'tar', 'TAR633G1432' => 'tar', 'TAR633G2771' => 'tar', 'THA.LOC104803394' => 'tha', 'THA.LOC104805153' => 'tha', 'THA.LOC104806784' => 'tha', 'THA.LOC104810473' => 'tha', 'THA.LOC104813100' => 'tha', 'THA.LOC104814215' => 'tha', 'THA.LOC104815554' => 'tha', 'THA.LOC104820544' => 'tha', 'THA.LOC104824754' => 'tha', 'THA.LOC104827717' => 'tha', 'Thecc.02G031400' => 'tca', 'Thecc.02G055900' => 'tca', 'Thecc.02G350800' => 'tca', 'Thecc.06G150900' => 'tca', 'Thecc.06G186600' => 'tca', 'Thecc.07G089600' => 'tca', 'Thecc.08G020400' => 'tca', 'Thecc.08G182100' => 'tca', 'Thhalv10000873m.g' => 'esa', 'Thhalv10004185m.g' => 'esa', 'Thhalv10006981m.g' => 'esa', 'Thhalv10007204m.g' => 'esa', 'Thhalv10011374m.g' => 'esa', 'Thhalv10013482m.g' => 'esa', 'Thhalv10017801m.g' => 'esa', 'Thhalv10024983m.g' => 'esa', 'TPR.G12072' => 'tpr', 'TPR.G15769' => 'tpr', 'TPR.G16504' => 'tpr', 'TPR.G16506' => 'tpr', 'TPR.G24345' => 'tpr', 'TPR.G26666' => 'tpr', 'TPR.G27320' => 'tpr', 'TPR.G31819' => 'tpr', 'TPR.G38879' => 'tpr', 'TPR.G39015' => 'tpr', 'TPR.G8819' => 'tpr', 'TWI09G0924' => 'twi', 'TWI12G0811' => 'twi', 'TWI12G1294' => 'twi', 'TWI31G0150' => 'twi', 'TWI36G1262' => 'twi', 'TWI38G1287' => 'twi', 'TWI38G1633' => 'twi', 'TWI38G1982' => 'twi', 'TWI39G0116' => 'twi', 'TWI60G1011' => 'twi', 'TWI63G0171' => 'twi', 'TWI73G0839' => 'twi', 'TWI79G1511' => 'twi', 'unitig_0.g915' => 'ugi', 'unitig_0.g916' => 'ugi', 'unitig_21.g20219' => 'ugi', 'unitig_21.g20416' => 'ugi', 'unitig_578.g16132' => 'ugi', 'unitig_578.g16718' => 'ugi', 'unitig_62.g23481' => 'ugi', 'unitig_744.g24535' => 'ugi', 'unitig_749.g13525' => 'ugi', 'vmacro01248' => 'vma', 'vmacro02290' => 'vma', 'vmacro10946' => 'vma', 'vmacro11865' => 'vma', 'vmacro12493' => 'vma', 'vmacro17322' => 'vma', 'vmacro21599' => 'vma', 'vmacro23041' => 'vma', 'VMungo0251G0004' => 'vmu', 'VMungo0251G2639' => 'vmu', 'VMungo0251G2967' => 'vmu', 'VMungo0540G0864' => 'vmu', 'VMungo0540G1569' => 'vmu', 'VMungo0647G0317' => 'vmu', 'VMungo0720G1373' => 'vmu', 'VMungo0720G1508' => 'vmu', 'VMungo1080G0485' => 'vmu', 'VMungo1215G3177' => 'vmu', 'Zm00001eb112600' => 'zma', 'Zm00001eb120220' => 'zma', 'Zm00001eb153240' => 'zma', 'Zm00001eb168880' => 'zma', 'Zm00001eb213920' => 'zma', 'Zm00001eb228280' => 'zma', 'Zm00001eb254580' => 'zma', 'Zm00001eb272180' => 'zma', 'Zm00001eb293190' => 'zma', 'Zm00001eb322930' => 'zma', 'Zm00001eb353360' => 'zma', 'Zm00001eb353390' => 'zma', 'Zm00001eb353430' => 'zma', 'Zm00001eb353440' => 'zma', 'Zm00001eb353780' => 'zma' ) $gf_id = 'HOM05D000499' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000499' ) $data_identifier = 'HOM05D000499' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 29, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 12, 'amhyb' => (int) 8, 'aly' => (int) 12, 'aox' => (int) 9, 'arhy' => (int) 26, 'ath' => (int) 8, 'atr' => (int) 7, 'acertr' => (int) 10, 'cqu' => (int) 15, 'bca' => (int) 29, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 11, 'cansat' => (int) 8, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 9, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 8, 'cpa' => (int) 10, 'csa' => (int) 7, 'camsi' => (int) 20, 'dca' => (int) 8, 'din' => (int) 12, 'dzi' => (int) 14, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 6, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 38, 'gra' => (int) 16, 'vvi' => (int) 8, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 5, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 11, 'lja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 11, 'mpo' => (int) 3, 'mbi' => (int) 14, 'mdo' => (int) 14, 'mtr' => (int) 8, 'cme' => (int) 9, 'egut' => (int) 9, 'ama' => (int) 11, 'nta' => (int) 17, 'nnu' => (int) 11, 'oeu' => (int) 18, 'osa' => (int) 8, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 6, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 9, 'rsi' => (int) 9, 'sbr' => (int) 10, 'sbo' => (int) 8, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 10, 'sas' => (int) 10, 'shi' => (int) 6, 'smo' => (int) 7, 'sly' => (int) 14, 'spe' => (int) 10, 'spa' => (int) 8, 'tar' => (int) 19, 'tha' => (int) 10, 'tca' => (int) 8, 'esa' => (int) 8, 'tpr' => (int) 11, 'twi' => (int) 13, 'ugi' => (int) 9, 'vma' => (int) 8, 'vmu' => (int) 10, 'zma' => (int) 15 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb353780' $species_info = array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ) $local_species = 'mpo' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000499', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1066', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p29780' => 'bna', 'A02p33180' => 'bna', 'A03p16470' => 'bna', 'A03p66010' => 'bna', 'A04p25970' => 'bna', 'A06p01270' => 'bna', 'A06p46080' => 'bna', 'A07p11400' => 'bna', 'A08p01840' => 'bna', 'A08p08230' => 'bna', 'A08p25740' => 'bna', 'A09p32070' => 'bna', 'A09p37830' => 'bna', 'A09p42840' => 'bna', 'A09p42850' => 'bna', 'Aa31LG10G2060' => 'aar', 'Aa31LG2G7410' => 'aar', 'Aa31LG6G10200' => 'aar', 'Aa31LG6G16680' => 'aar', 'Aa31LG6G8470' => 'aar', 'Aa31LG9G12730' => 'aar', 'Aa31LG9G13680' => 'aar', 'Aa31LG9G14920' => 'aar', 'Aa31LG9G6650' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4977' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5467' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3254' => 'aag', 'Actinidia02578' => 'ach', 'Actinidia07693' => 'ach', 'Actinidia08413' => 'ach', 'Actinidia08414' => 'ach', 'Actinidia15289' => 'ach', 'Actinidia19871' => 'ach', 'Actinidia21475' => 'ach', 'Actinidia22576' => 'ach', 'Actinidia28327' => 'ach', 'Actinidia32491' => 'ach', 'Actinidia39463' => 'ach', 'Actinidia39571' => 'ach', 'Ah.01g013750' => 'amhyb', 'Ah.01g023210' => 'amhyb', 'Ah.04g164850' => 'amhyb', 'Ah.05g178060' => 'amhyb', 'Ah.07g204270' => 'amhyb', 'Ah.07g208480' => 'amhyb', 'Ah.09g237410' => 'amhyb', 'Ah.14g089460' => 'amhyb', 'AL1G41790' => 'aly', 'AL1G49050' => 'aly', 'AL1G53810' => 'aly', 'AL1G61400' => 'aly', 'AL4G18580' => 'aly', 'AL5G12510' => 'aly', 'AL5G12540' => 'aly', 'AL6G43230' => 'aly', 'AL7G10370' => 'aly', 'AL7G19250' => 'aly', 'AL8G12240' => 'aly', 'AL8G18540' => 'aly', 'Aqoxy1G02409' => 'aox', 'Aqoxy2G03993' => 'aox', 'Aqoxy3G03357' => 'aox', 'Aqoxy4G00785' => 'aox', 'Aqoxy5G02598' => 'aox', 'Aqoxy6G00132' => 'aox', 'Aqoxy7G01776' => 'aox', 'Aqoxy7G02316' => 'aox', 'Aqoxy7G03973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.12AFKW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B8730' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27IQR1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3F75VG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3RE0GA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41TCQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.527VTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FIR39' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5W8UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DA38EV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ63HS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H1I32C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HC27T5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4M8AP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7N3CZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9UVDZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LS1NQA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT1D4B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SKC4TM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCFV76' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF9Q1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQWD9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1ZM88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WE07RT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YCK7VH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJE6Q6' => 'arhy', 'AT1G28240' => 'ath', 'AT1G34550' => 'ath', 'AT1G53040' => 'ath', 'AT2G02910' => 'ath', 'AT4G09630' => 'ath', 'AT4G38500' => 'ath', 'AT5G42660' => 'ath', 'AT5G46220' => 'ath', 'ATR0152G026' => 'atr', 'ATR0564G343' => 'atr', 'ATR0706G151' => 'atr', 'ATR0733G207' => 'atr', 'ATR0751G234' => 'atr', 'ATR0807G048' => 'atr', 'ATR1091G084' => 'atr', 'Atru.chr10.1229' => 'acertr', 'Atru.chr10.1230' => 'acertr', 'Atru.chr10.1874' => 'acertr', 'Atru.chr11.1808' => 'acertr', 'Atru.chr13.1795' => 'acertr', 'Atru.chr13.570' => 'acertr', 'Atru.chr2.2608' => 'acertr', 'Atru.chr2.2609' => 'acertr', 'Atru.chr5.3428' => 'acertr', 'Atru.chr8.1171' => 'acertr', 'AUR62004651' => 'cqu', 'AUR62008675' => 'cqu', 'AUR62010014' => 'cqu', 'AUR62013004' => 'cqu', 'AUR62014825' => 'cqu', 'AUR62015015' => 'cqu', 'AUR62015151' => 'cqu', 'AUR62017020' => 'cqu', 'AUR62019422' => 'cqu', 'AUR62023570' => 'cqu', 'AUR62025571' => 'cqu', 'AUR62029098' => 'cqu', 'AUR62033863' => 'cqu', 'AUR62034296' => 'cqu', 'AUR62040075' => 'cqu', 'BcaB02g07334' => 'bca', 'BcaB02g10575' => 'bca', 'BcaB03g12119' => 'bca', 'BcaB03g12120' => 'bca', 'BcaB03g13945' => 'bca', 'BcaB04g17123' => 'bca', 'BcaB04g17867' => 'bca', 'BcaB04g19839' => 'bca', 'BcaB07g30317' => 'bca', 'BcaB07g32432' => 'bca', 'BcaB07g33362' => 'bca', 'BcaB08g36611' => 'bca', 'BcaC01g00028' => 'bca', 'BcaC01g01356' => 'bca', 'BcaC01g02034' => 'bca', 'BcaC01g06051' => 'bca', 'BcaC03g16839' => 'bca', 'BcaC03g17176' => 'bca', 'BcaC05g26829' => 'bca', 'BcaC06g31490' => 'bca', 'BcaC06g35344' => 'bca', 'BcaC06g36570' => 'bca', 'BcaC07g37537' => 'bca', 'BcaC08g43491' => 'bca', 'BcaC08g43773' => 'bca', 'BcaNung00234' => 'bca', 'BcaNung01982' => 'bca', 'BcaNung03707' => 'bca', 'BcaNung06454' => 'bca', 'BolC2t10762H' => 'bol', 'BolC2t11191H' => 'bol', 'BolC3t14322H' => 'bol', 'BolC3t19747H' => 'bol', 'BolC3t21425H' => 'bol', 'BolC4t27800H' => 'bol', 'BolC5t31423H' => 'bol', 'BolC6t35951H' => 'bol', 'BolC6t36282H' => 'bol', 'BolC7t40678H' => 'bol', 'BolC7t40679H' => 'bol', 'BolC7t42222H' => 'bol', 'BolC7t43492H' => 'bol', 'BolC7t46785H' => 'bol', 'BolC8t47853H' => 'bol', 'BolC9t56805H' => 'bol', 'BraA02t08000Z' => 'bra', 'BraA02t08341Z' => 'bra', 'BraA03t10936Z' => 'bra', 'BraA03t15657Z' => 'bra', 'BraA04t18100Z' => 'bra', 'BraA05t20523Z' => 'bra', 'BraA06t23353Z' => 'bra', 'BraA06t27473Z' => 'bra', 'BraA06t27769Z' => 'bra', 'BraA07t28928Z' => 'bra', 'BraA08t32236Z' => 'bra', 'BraA08t32841Z' => 'bra', 'BraA08t34524Z' => 'bra', 'BraA09t38742Z' => 'bra', 'BraA09t39295Z' => 'bra', 'C02p47180' => 'bna', 'C02p50990' => 'bna', 'C03p19360' => 'bna', 'C03p74950' => 'bna', 'C03p91000' => 'bna', 'C04p63260' => 'bna', 'C05p27050' => 'bna', 'C06p08750' => 'bna', 'C06p11490' => 'bna', 'C07p02820' => 'bna', 'C07p17180' => 'bna', 'C07p29440' => 'bna', 'C07p63730' => 'bna', 'C09p39260' => 'bna', 'CAN.G1164.34' => 'can', 'CAN.G1164.39' => 'can', 'CAN.G1530.3' => 'can', 'CAN.G162.61' => 'can', 'CAN.G176.6' => 'can', 'CAN.G289.49' => 'can', 'CAN.G370.21' => 'can', 'CAN.G370.22' => 'can', 'CAN.G371.117' => 'can', 'CAN.G58.37' => 'can', 'CAN.G588.98' => 'can', 'CANSAT21G2266' => 'cansat', 'CANSAT25G2799' => 'cansat', 'CANSAT35G0862' => 'cansat', 'CANSAT35G1704' => 'cansat', 'CANSAT35G1760' => 'cansat', 'CANSAT56G3971' => 'cansat', 'CANSAT56G4116' => 'cansat', 'CANSAT80G1259' => 'cansat', 'CARHR027730' => 'chi', 'CARHR033880' => 'chi', 'CARHR043270' => 'chi', 'CARHR145330' => 'chi', 'CARHR145340' => 'chi', 'CARHR175570' => 'chi', 'CARHR181570' => 'chi', 'CARHR258470' => 'chi', 'CARHR260490' => 'chi', 'CARHR294220' => 'chi', 'Carub.0001s2668' => 'cru', 'Carub.0001s3257' => 'cru', 'Carub.0001s4220' => 'cru', 'Carub.0005s0179' => 'cru', 'Carub.0006s2807' => 'cru', 'Carub.0007s0039' => 'cru', 'Carub.0008s0169' => 'cru', 'Carub.0008s0636' => 'cru', 'Ca_00338_v3' => 'car', 'Ca_00542_v3' => 'car', 'Ca_01844_v3' => 'car', 'Ca_10611_v3' => 'car', 'Ca_13326_v3' => 'car', 'Ca_17944_v3' => 'car', 'Ca_18546_v3' => 'car', 'Ca_24219_v3' => 'car', 'Ca_29972_v3' => 'car', 'CBR_g3681' => 'cbr', 'CBR_g40021' => 'cbr', 'Cc01_g08140' => 'ccan', 'Cc02_g13410' => 'ccan', 'Cc02_g37480' => 'ccan', 'Cc05_g12030' => 'ccan', 'Cc09_g03370' => 'ccan', 'Cc09_g10300' => 'ccan', 'Cc10_g03530' => 'ccan', 'Cc10_g11380' => 'ccan', 'CDE01G0176' => 'cde', 'CDE02G0675' => 'cde', 'CDE02G0942' => 'cde', 'CDE02G1153' => 'cde', 'CDE02G4177' => 'cde', 'CDE04G2117' => 'cde', 'CDE04G2736' => 'cde', 'CDE08G1161' => 'cde', 'CDE09G1238' => 'cde', 'Cfa000467' => 'cfa', 'Cfa000947' => 'cfa', 'Cfa004969' => 'cfa', 'Cfa005284' => 'cfa', 'Cfa008993' => 'cfa', 'Cfa018187' => 'cfa', 'Cfa018454' => 'cfa', 'Cfa020585' => 'cfa', 'Ciclev10000424m.g' => 'ccl', 'Ciclev10003605m.g' => 'ccl', 'Ciclev10007828m.g' => 'ccl', 'Ciclev10014620m.g' => 'ccl', 'Ciclev10015169m.g' => 'ccl', 'Ciclev10018291m.g' => 'ccl', 'Ciclev10028256m.g' => 'ccl', 'Ciclev10033822m.g' => 'ccl', 'CiPaw.05G060300' => 'cil', 'CiPaw.05G085000' => 'cil', 'CiPaw.06G083700' => 'cil', 'CiPaw.06G120300' => 'cil', 'CiPaw.09G060500' => 'cil', 'CiPaw.09G123800' => 'cil', 'CiPaw.11G169700' => 'cil', 'CiPaw.12G118300' => 'cil', 'CiPaw.15G071000' => 'cil', 'CiPaw.15G081900' => 'cil', 'ClCG01G024610' => 'cla', 'ClCG03G006070' => 'cla', 'ClCG05G019250' => 'cla', 'ClCG09G009500' => 'cla', 'ClCG11G008200' => 'cla', 'ClCG11G018080' => 'cla', 'COL.COLO4_17373' => 'col', 'COL.COLO4_22994' => 'col', 'COL.COLO4_26389' => 'col', 'COL.COLO4_27170' => 'col', 'COL.COLO4_31074' => 'col', 'COL.COLO4_31465' => 'col', 'COL.COLO4_36438' => 'col', 'COL.COLO4_36439' => 'col', 'Cpa.g.c38781' => 'cpa', 'Cpa.g.sc128.12' => 'cpa', 'Cpa.g.sc166.7' => 'cpa', 'Cpa.g.sc166.8' => 'cpa', 'Cpa.g.sc20.111' => 'cpa', 'Cpa.g.sc27.31' => 'cpa', 'Cpa.g.sc64.36' => 'cpa', 'Cpa.g.sc64.37' => 'cpa', 'Cpa.g.sc66.49' => 'cpa', 'Cpa.g.sc80.64' => 'cpa', 'CsaV3_1G012320' => 'csa', 'CsaV3_2G008480' => 'csa', 'CsaV3_2G033450' => 'csa', 'CsaV3_3G044830' => 'csa', 'CsaV3_4G033710' => 'csa', 'CsaV3_6G051730' => 'csa', 'CsaV3_7G025350' => 'csa', 'CSS0001067' => 'camsi', 'CSS0005996' => 'camsi', 'CSS0006590' => 'camsi', 'CSS0009673' => 'camsi', 'CSS0010201' => 'camsi', 'CSS0010549' => 'camsi', 'CSS0011364' => 'camsi', 'CSS0014473' => 'camsi', 'CSS0014961' => 'camsi', 'CSS0020191' => 'camsi', 'CSS0021165' => 'camsi', 'CSS0022306' => 'camsi', 'CSS0030591' => 'camsi', 'CSS0030696' => 'camsi', 'CSS0032653' => 'camsi', 'CSS0037487' => 'camsi', 'CSS0041102' => 'camsi', 'CSS0041261' => 'camsi', 'CSS0046246' => 'camsi', 'CSS0049256' => 'camsi', 'DCAR_004075' => 'dca', 'DCAR_011538' => 'dca', 'DCAR_019553' => 'dca', 'DCAR_020952' => 'dca', 'DCAR_021739' => 'dca', 'DCAR_027407' => 'dca', 'DCAR_027913' => 'dca', 'DCAR_028066' => 'dca', 'Dinv05899' => 'din', 'Dinv07563' => 'din', 'Dinv08010' => 'din', 'Dinv14125' => 'din', 'Dinv20172' => 'din', 'Dinv30743' => 'din', 'Dinv31229' => 'din', 'Dinv34162' => 'din', 'Dinv36028' => 'din', 'Dinv39368' => 'din', 'Dinv40565' => 'din', 'Dinv41706' => 'din', 'Duzib052G0089' => 'dzi', 'Duzib116G0641' => 'dzi', 'Duzib132G0069' => 'dzi', 'Duzib132G1219' => 'dzi', 'Duzib147G0278' => 'dzi', 'Duzib160G0480' => 'dzi', 'Duzib170G0661' => 'dzi', 'Duzib177G0591' => 'dzi', 'Duzib187G1353' => 'dzi', 'Duzib192G0858' => 'dzi', 'Duzib192G0883' => 'dzi', 'Duzib213G0506' => 'dzi', 'Duzib235G0289' => 'dzi', 'Duzib251G0422' => 'dzi', 'ECA232G3898' => 'eca', 'ECA233G5950' => 'eca', 'ECA234G1699' => 'eca', 'ECA234G2421' => 'eca', 'ECA236G0426' => 'eca', 'ECA236G4331' => 'eca', 'ECA248G2573' => 'eca', 'EL10Ac1g00077' => 'bvu', 'EL10Ac1g01746' => 'bvu', 'EL10Ac2g03464' => 'bvu', 'EL10Ac4g08176' => 'bvu', 'EL10Ac7g17521' => 'bvu', 'EL10Ac8g20386' => 'bvu', 'EL10Ac9g21343' => 'bvu', 'EL10Ac9g22688' => 'bvu', 'Eucgr.B03434' => 'egr', 'Eucgr.D00618' => 'egr', 'Eucgr.E02395' => 'egr', 'Eucgr.F01129' => 'egr', 'Eucgr.F02622' => 'egr', 'Eucgr.F04207' => 'egr', 'FAN01G0570' => 'fan', 'FAN03G3351' => 'fan', 'FAN06G3702' => 'fan', 'FAN07G2149' => 'fan', 'FAN10G3758' => 'fan', 'FAN11G1170' => 'fan', 'FAN11G2050' => 'fan', 'FAN11G2724' => 'fan', 'FAN12G1700' => 'fan', 'FAN12G2028' => 'fan', 'FAN15G1160' => 'fan', 'FAN15G3063' => 'fan', 'FAN16G2540' => 'fan', 'FAN16G3077' => 'fan', 'FAN16G3624' => 'fan', 'FAN17G0221' => 'fan', 'FAN20G2492' => 'fan', 'FAN20G2905' => 'fan', 'FAN21G0548' => 'fan', 'FAN21G1300' => 'fan', 'FAN22G0077' => 'fan', 'FAN22G1315' => 'fan', 'FAN24G1280' => 'fan', 'FAN24G1445' => 'fan', 'FAN24G3527' => 'fan', 'FAN25G0464' => 'fan', 'FAN25G2885' => 'fan', 'FAN25G3270' => 'fan', 'FAN27G1101' => 'fan', 'FAN27G2846' => 'fan', 'FAN27G3524' => 'fan', 'FvH4_2g11770' => 'fve', 'FvH4_2g15630' => 'fve', 'FvH4_3g05570' => 'fve', 'FvH4_3g09110' => 'fve', 'FvH4_3g19940' => 'fve', 'FvH4_4g04821' => 'fve', 'FvH4_4g31480' => 'fve', 'FvH4_7g01740' => 'fve', 'Glyma.05G130400' => 'gma', 'Glyma.05G156400' => 'gma', 'Glyma.07G197000' => 'gma', 'Glyma.08G085151' => 'gma', 'Glyma.08G114500' => 'gma', 'Glyma.08G300400' => 'gma', 'Glyma.10G215800' => 'gma', 'Glyma.12G224400' => 'gma', 'Glyma.13G179300' => 'gma', 'Glyma.13G218151' => 'gma', 'Glyma.13G238800' => 'gma', 'Glyma.13G276900' => 'gma', 'Glyma.14G078200' => 'gma', 'Glyma.15G074500' => 'gma', 'Glyma.15G094100' => 'gma', 'Glyma.17G247200' => 'gma', 'Glyma.18G120100' => 'gma', 'Glyma.20G176000' => 'gma', 'Gohir.A01G063600' => 'ghi', 'Gohir.A01G170301' => 'ghi', 'Gohir.A02G060500' => 'ghi', 'Gohir.A05G133850' => 'ghi', 'Gohir.A05G161400' => 'ghi', 'Gohir.A06G012900' => 'ghi', 'Gohir.A06G035901' => 'ghi', 'Gohir.A06G127100' => 'ghi', 'Gohir.A06G210500' => 'ghi', 'Gohir.A08G008650' => 'ghi', 'Gohir.A09G072700' => 'ghi', 'Gohir.A09G088301' => 'ghi', 'Gohir.A10G040600' => 'ghi', 'Gohir.A12G036300' => 'ghi', 'Gohir.A12G143350' => 'ghi', 'Gohir.A12G165500' => 'ghi', 'Gohir.A13G145700' => 'ghi', 'Gohir.D01G050000' => 'ghi', 'Gohir.D01G051366' => 'ghi', 'Gohir.D01G161350' => 'ghi', 'Gohir.D02G065900' => 'ghi', 'Gohir.D05G164200' => 'ghi', 'Gohir.D05G355500' => 'ghi', 'Gohir.D06G010400' => 'ghi', 'Gohir.D06G111250' => 'ghi', 'Gohir.D06G132000' => 'ghi', 'Gohir.D06G210500' => 'ghi', 'Gohir.D07G165675' => 'ghi', 'Gohir.D08G062240' => 'ghi', 'Gohir.D08G086101' => 'ghi', 'Gohir.D08G138060' => 'ghi', 'Gohir.D09G072300' => 'ghi', 'Gohir.D10G041400' => 'ghi', 'Gohir.D11G191020' => 'ghi', 'Gohir.D11G212066' => 'ghi', 'Gohir.D12G036300' => 'ghi', 'Gohir.D12G168600' => 'ghi', 'Gohir.D13G150600' => 'ghi', 'Gorai.001G057300' => 'gra', 'Gorai.002G069900' => 'gra', 'Gorai.002G200000' => 'gra', 'Gorai.003G067600' => 'gra', 'Gorai.005G074800' => 'gra', 'Gorai.006G087300' => 'gra', 'Gorai.008G037500' => 'gra', 'Gorai.008G181400' => 'gra', 'Gorai.009G169400' => 'gra', 'Gorai.009G387900' => 'gra', 'Gorai.010G013300' => 'gra', 'Gorai.010G153800' => 'gra', 'Gorai.010G255800' => 'gra', 'Gorai.011G043700' => 'gra', 'Gorai.011G198900' => 'gra', 'Gorai.013G168400' => 'gra', 'GSVIVG01005212001' => 'vvi', 'GSVIVG01006163001' => 'vvi', 'GSVIVG01009625001' => 'vvi', 'GSVIVG01014338001' => 'vvi', 'GSVIVG01020005001' => 'vvi', 'GSVIVG01021450001' => 'vvi', 'GSVIVG01023975001' => 'vvi', 'GSVIVG01034490001' => 'vvi', 'HanXRQChr04g0112071' => 'han', 'HanXRQChr05g0131151' => 'han', 'HanXRQChr09g0262371' => 'han', 'HanXRQChr09g0268401' => 'han', 'HanXRQChr10g0279241' => 'han', 'HanXRQChr10g0297961' => 'han', 'HanXRQChr11g0326231' => 'han', 'HanXRQChr11g0328471' => 'han', 'HanXRQChr16g0507941' => 'han', 'HanXRQChr17g0560211' => 'han', 'Haze_02108' => 'cav', 'Haze_02428' => 'cav', 'Haze_05593' => 'cav', 'Haze_06448' => 'cav', 'Haze_09427' => 'cav', 'Haze_12022' => 'cav', 'Haze_17612' => 'cav', 'Haze_17928' => 'cav', 'Hma1.2p1_0032F.1_g019250' => 'hma', 'Hma1.2p1_0163F.1_g072690' => 'hma', 'Hma1.2p1_0265F.1_g106710' => 'hma', 'Hma1.2p1_0286F.1_g113970' => 'hma', 'Hma1.2p1_0363F.1_g136640' => 'hma', 'Hma1.2p1_0584F.1_g183470' => 'hma', 'Hma1.2p1_0885F.1_g232570' => 'hma', 'HPP92_006022' => 'vpl', 'HPP92_007320' => 'vpl', 'HPP92_011521' => 'vpl', 'HPP92_019387' => 'vpl', 'HPP92_024038' => 'vpl', 'Hund05891' => 'sun', 'Hund06450' => 'sun', 'Hund12053' => 'sun', 'Hund16800' => 'sun', 'Hund21222' => 'sun', 'Hund22896' => 'sun', 'Hund23746' => 'sun', 'Hund27083' => 'sun', 'Lalb_Chr02g0141831' => 'lal', 'Lalb_Chr02g0141841' => 'lal', 'Lalb_Chr05g0220411' => 'lal', 'Lalb_Chr06g0162081' => 'lal', 'Lalb_Chr09g0327651' => 'lal', 'Lalb_Chr13g0295051' => 'lal', 'Lalb_Chr15g0086801' => 'lal', 'Lalb_Chr16g0383781' => 'lal', 'Lalb_Chr16g0383791' => 'lal', 'Lalb_Chr18g0055441' => 'lal', 'Lalb_Chr18g0059611' => 'lal', 'Lalb_Chr20g0109661' => 'lal', 'Lalb_Chr20g0109831' => 'lal', 'Lalb_Chr20g0121871' => 'lal', 'Lalb_Chr22g0355361' => 'lal', 'Lalb_Chr25g0286371' => 'lal', 'Lj1A1187G43' => 'lonja', 'Lj1A1205T50' => 'lonja', 'Lj1A800G33' => 'lonja', 'Lj1C1187T7' => 'lonja', 'Lj1C843T11' => 'lonja', 'Lj1g0010940' => 'lja', 'Lj2A288T69' => 'lonja', 'Lj3g0024276' => 'lja', 'Lj4A47T76' => 'lonja', 'Lj4g0005805' => 'lja', 'Lj4g0006097' => 'lja', 'Lj4g0008528' => 'lja', 'Lj4g0024907' => 'lja', 'Lj5g0012472' => 'lja', 'Lj5g0018648' => 'lja', 'Lj6C789G1' => 'lonja', 'Lj6g0004000' => 'lja', 'Lj7A292G67' => 'lonja', 'Lj7A292T64' => 'lonja', 'Lj9A400T58' => 'lonja', 'Lsat_1_v5_gn_1_126181' => 'lsa', 'Lsat_1_v5_gn_4_123041' => 'lsa', 'Lsat_1_v5_gn_4_133620' => 'lsa', 'Lsat_1_v5_gn_4_53221' => 'lsa', 'Lsat_1_v5_gn_4_71961' => 'lsa', 'Lsat_1_v5_gn_7_105241' => 'lsa', 'Lsat_1_v5_gn_7_21361' => 'lsa', 'Lsat_1_v5_gn_7_28860' => 'lsa', 'Lsat_1_v5_gn_7_31260' => 'lsa', 'Lsat_1_v5_gn_8_52801' => 'lsa', 'Manes.02G191400' => 'mes', 'Manes.03G110100' => 'mes', 'Manes.04G071100' => 'mes', 'Manes.05G100500' => 'mes', 'Manes.05G164700' => 'mes', 'Manes.15G087000' => 'mes', 'Manes.15G121500' => 'mes', 'Manes.16G028300' => 'mes', 'Manes.17G046100' => 'mes', 'Manes.17G069800' => 'mes', 'Manes.18G100500' => 'mes', 'Mapoly0002s0109' => 'mpo', 'Mapoly0024s0007' => 'mpo', 'Mapoly0089s0032' => 'mpo', 'MBI04_g42241_MAGBIO' => 'mbi', 'MBI05_g11988_MAGBIO' => 'mbi', 'MBI05_g35452_MAGBIO' => 'mbi', 'MBI07_g30179_MAGBIO' => 'mbi', 'MBI07_g35859_MAGBIO' => 'mbi', 'MBI07_g35860_MAGBIO' => 'mbi', 'MBI07_g37166_MAGBIO' => 'mbi', 'MBI08_g18172_MAGBIO' => 'mbi', 'MBI09_g08441_MAGBIO' => 'mbi', 'MBI13_g01676_MAGBIO' => 'mbi', 'MBI14_g42955_MAGBIO' => 'mbi', 'MBI16_g13161_MAGBIO' => 'mbi', 'MBI17_g27204_MAGBIO' => 'mbi', 'MBI19_g21595_MAGBIO' => 'mbi', 'MD00G1148400' => 'mdo', 'MD02G1301200' => 'mdo', 'MD03G1227800' => 'mdo', 'MD05G1041100' => 'mdo', 'MD05G1124800' => 'mdo', 'MD05G1284000' => 'mdo', 'MD05G1338800' => 'mdo', 'MD05G1338900' => 'mdo', 'MD07G1022800' => 'mdo', 'MD10G1047500' => 'mdo', 'MD10G1127500' => 'mdo', 'MD10G1262300' => 'mdo', 'MD10G1293800' => 'mdo', 'MD16G1074300' => 'mdo', 'Medtr1g021670' => 'mtr', 'Medtr1g096320' => 'mtr', 'Medtr2g013690' => 'mtr', 'Medtr2g019450' => 'mtr', 'Medtr2g085170' => 'mtr', 'Medtr4g088785' => 'mtr', 'Medtr8g055930' => 'mtr', 'Medtr8g085850' => 'mtr', 'MELO3C002605.2' => 'cme', 'MELO3C003891.2' => 'cme', 'MELO3C004012.2' => 'cme', 'MELO3C007134.2' => 'cme', 'MELO3C008118.2' => 'cme', 'MELO3C016700.2' => 'cme', 'MELO3C024127.2' => 'cme', 'MELO3C033361.2' => 'cme', 'MELO3C033362.2' => 'cme', 'Migut.C00430' => 'egut', 'Migut.C01246' => 'egut', 'Migut.E00101' => 'egut', 'Migut.H01486' => 'egut', 'Migut.H01939' => 'egut', 'Migut.K00360' => 'egut', 'Migut.M00910' => 'egut', 'Migut.M01139' => 'egut', 'Migut.N02677' => 'egut', 'MSTRG.13252' => 'ama', 'MSTRG.14701' => 'ama', 'MSTRG.1521' => 'ama', 'MSTRG.15884' => 'ama', 'MSTRG.16242' => 'ama', 'MSTRG.22285' => 'ama', 'MSTRG.22444' => 'ama', 'MSTRG.2349' => 'ama', 'MSTRG.26308' => 'ama', 'MSTRG.28296' => 'ama', 'MSTRG.9895' => 'ama', 'Nitab4.5_0000110g0060' => 'nta', 'Nitab4.5_0000420g0130' => 'nta', 'Nitab4.5_0000422g0030' => 'nta', 'Nitab4.5_0000560g0180' => 'nta', 'Nitab4.5_0000703g0100' => 'nta', 'Nitab4.5_0000786g0200' => 'nta', 'Nitab4.5_0001336g0020' => 'nta', 'Nitab4.5_0001796g0030' => 'nta', 'Nitab4.5_0003348g0060' => 'nta', 'Nitab4.5_0003698g0040' => 'nta', 'Nitab4.5_0003942g0090' => 'nta', 'Nitab4.5_0004775g0070' => 'nta', 'Nitab4.5_0004864g0030' => 'nta', 'Nitab4.5_0005615g0020' => 'nta', 'Nitab4.5_0009288g0030' => 'nta', 'Nitab4.5_0009341g0010' => 'nta', 'Nitab4.5_0009535g0010' => 'nta', 'Nn1g03995' => 'nnu', 'Nn1g04100' => 'nnu', 'Nn1g06530' => 'nnu', 'Nn3g16404' => 'nnu', 'Nn3g17212' => 'nnu', 'Nn3g20776' => 'nnu', 'Nn3g21923' => 'nnu', 'Nn5g27737' => 'nnu', 'Nn5g29461' => 'nnu', 'Nn7g38355' => 'nnu', 'Nn8g39873' => 'nnu', 'Oeu000548.2' => 'oeu', 'Oeu004672.1' => 'oeu', 'Oeu015605.2' => 'oeu', 'Oeu016092.1' => 'oeu', 'Oeu017879.3' => 'oeu', 'Oeu024910.1' => 'oeu', 'Oeu028965.1' => 'oeu', 'Oeu031269.1' => 'oeu', 'Oeu031270.1' => 'oeu', 'Oeu032535.1' => 'oeu', 'Oeu034151.1' => 'oeu', 'Oeu034152.1' => 'oeu', 'Oeu034588.2' => 'oeu', 'Oeu050846.1' => 'oeu', 'Oeu050849.2' => 'oeu', 'Oeu051063.2' => 'oeu', 'Oeu052368.1' => 'oeu', 'Oeu052370.1' => 'oeu', 'Os01g0210400' => 'osa', 'Os01g0304300' => 'osa', 'Os01g0749100' => 'osa', 'Os02g0745800' => 'osa', 'Os03g0769050' => 'osa', 'Os05g0531500' => 'osa', 'Os06g0724300' => 'osa', 'Os11g0198100' => 'osa', 'Peaxi162Scf00069g01425' => 'pax', 'Peaxi162Scf00280g00811' => 'pax', 'Peaxi162Scf00310g00615' => 'pax', 'Peaxi162Scf00362g00542' => 'pax', 'Peaxi162Scf00461g00310' => 'pax', 'Peaxi162Scf00530g00118' => 'pax', 'Peaxi162Scf00541g00057' => 'pax', 'Peaxi162Scf00661g00017' => 'pax', 'Peaxi162Scf00926g00027' => 'pax', 'Peaxi162Scf01064g00263' => 'pax', 'Peaxi162Scf01211g00135' => 'pax', 'PGR004G2336' => 'pgr', 'PGR042G0327' => 'pgr', 'PGR042G1957' => 'pgr', 'PGR042G2003' => 'pgr', 'PGR042G3929' => 'pgr', 'PGR083G1137' => 'pgr', 'PGR083G1364' => 'pgr', 'PGSC0003DMG400003381' => 'stu', 'PGSC0003DMG400003417' => 'stu', 'PGSC0003DMG400008981' => 'stu', 'PGSC0003DMG400012417' => 'stu', 'PGSC0003DMG400012823' => 'stu', 'PGSC0003DMG400016885' => 'stu', 'PGSC0003DMG400022812' => 'stu', 'PGSC0003DMG400029726' => 'stu', 'PGSC0003DMG401009243' => 'stu', 'PGSC0003DMG401031505' => 'stu', 'PGSC0003DMG402031505' => 'stu', 'Phvul.001G017600' => 'pvu', 'Phvul.002G193500' => 'pvu', 'Phvul.002G228900' => 'pvu', 'Phvul.002G236800' => 'pvu', 'Phvul.003G049500' => 'pvu', 'Phvul.005G072000' => 'pvu', 'Phvul.006G164800' => 'pvu', 'Phvul.006G185100' => 'pvu', 'Phvul.007G090000' => 'pvu', 'Potri.001G399800' => 'ptr', 'Potri.002G149900' => 'ptr', 'Potri.004G044100' => 'ptr', 'Potri.004G177600' => 'ptr', 'Potri.009G138000' => 'ptr', 'Potri.010G094000' => 'ptr', 'Potri.011G053000' => 'ptr', 'Potri.011G119300' => 'ptr', 'Potri.013G113700' => 'ptr', 'Potri.018G107800' => 'ptr', 'Potri.019G084100' => 'ptr', 'Pp3c14_23720' => 'ppa', 'Pp3c16_6340' => 'ppa', 'Pp3c23_13420' => 'ppa', 'Pp3c24_2740' => 'ppa', 'Pp3c25_860' => 'ppa', 'Pp3c8_21750' => 'ppa', 'Prupe.1G273000' => 'ppe', 'Prupe.1G273700' => 'ppe', 'Prupe.1G274100' => 'ppe', 'Prupe.2G023300' => 'ppe', 'Prupe.4G048000' => 'ppe', 'Prupe.4G080400' => 'ppe', 'Prupe.4G181200' => 'ppe', 'Prupe.8G056900' => 'ppe', 'Prupe.8G168700' => 'ppe', 'Psat1g189080' => 'psa', 'Psat1g204760' => 'psa', 'Psat4g175560' => 'psa', 'Psat4g177720' => 'psa', 'Psat5g244240' => 'psa', 'Psat6g010720' => 'psa', 'Psat6g187200' => 'psa', 'Psat7g072040' => 'psa', 'PSO017G3501' => 'pso', 'PSO063G2148' => 'pso', 'PSO063G5608' => 'pso', 'PSO210G6392' => 'pso', 'PSO541G2319' => 'pso', 'PSO541G2836' => 'pso', 'PSO541G4012' => 'pso', 'PSO541G6253' => 'pso', 'PSO675G0580' => 'pso', 'PSO675G0856' => 'pso', 'PSO675G5635' => 'pso', 'PSO675G9157' => 'pso', 'PSO832G1660' => 'pso', 'PSO832G1969' => 'pso', 'QL02p007186' => 'qlo', 'QL02p033904' => 'qlo', 'QL03p064391' => 'qlo', 'QL05p040593' => 'qlo', 'QL05p058242' => 'qlo', 'QL08p021825' => 'qlo', 'QL11p004981' => 'qlo', 'RcHm_v2.0_Chr1g0318301' => 'rch', 'RcHm_v2.0_Chr4g0418501' => 'rch', 'RcHm_v2.0_Chr4g0439971' => 'rch', 'RcHm_v2.0_Chr5g0008541' => 'rch', 'RcHm_v2.0_Chr5g0014101' => 'rch', 'RcHm_v2.0_Chr5g0014131' => 'rch', 'RcHm_v2.0_Chr5g0033621' => 'rch', 'RcHm_v2.0_Chr6g0272041' => 'rch', 'RcHm_v2.0_Chr6g0278831' => 'rch', 'Rhsim02G0130400' => 'rsi', 'Rhsim02G0171100' => 'rsi', 'Rhsim05G0053000' => 'rsi', 'Rhsim05G0053100' => 'rsi', 'Rhsim06G0096500' => 'rsi', 'Rhsim06G0096600' => 'rsi', 'Rhsim06G0199100' => 'rsi', 'Rhsim12G0062300' => 'rsi', 'Rhsim12G0062800' => 'rsi', 'Sabra02G0118600' => 'sbr', 'Sabra04G0027300' => 'sbr', 'Sabra04G0119500' => 'sbr', 'Sabra08G0112500' => 'sbr', 'Sabra11G0036800' => 'sbr', 'Sabra11G0103800' => 'sbr', 'Sabra13G0096300' => 'sbr', 'Sabra16G0262300' => 'sbr', 'Sabra18G0091700' => 'sbr', 'Sabra19G0095400' => 'sbr', 'SalBow6G3080' => 'sbo', 'SalBow7G1157' => 'sbo', 'SalBow7G2123' => 'sbo', 'SalBow7G2285' => 'sbo', 'SalBow7G3537' => 'sbo', 'SalBow8G2947' => 'sbo', 'SalBow8G4463' => 'sbo', 'SalBow8G5466' => 'sbo', 'Sc01g0001750' => 'sci', 'Sc02g0006640' => 'sci', 'Sc02g0006670' => 'sci', 'Sc04g0008220' => 'sci', 'Sc05g0006190' => 'sci', 'Sc08g0002760' => 'sci', 'Sc17g0006170' => 'sci', 'Sc22g0002050' => 'sci', 'Sc23g0001190' => 'sci', 'Sc24g0000980' => 'sci', 'Sed0006245' => 'sed', 'Sed0007543' => 'sed', 'Sed0009411' => 'sed', 'Sed0010765' => 'sed', 'Sed0012944' => 'sed', 'Sed0014682' => 'sed', 'Sed0016174' => 'sed', 'Sed0016796' => 'sed', 'Sed0020317' => 'sed', 'Sed0021467' => 'sed', 'SEGI_01316' => 'sgi', 'SEGI_03374' => 'sgi', 'SEGI_16265' => 'sgi', 'SEGI_18569' => 'sgi', 'SEGI_20351' => 'sgi', 'SEGI_26395' => 'sgi', 'SEGI_29469' => 'sgi', 'SEGI_34771' => 'sgi', 'SEGI_36769' => 'sgi', 'SEGI_37139' => 'sgi', 'SGA_v2.0_scaffold100G29687' => 'sas', 'SGA_v2.0_scaffold118G32472' => 'sas', 'SGA_v2.0_scaffold14G07051' => 'sas', 'SGA_v2.0_scaffold183G39845' => 'sas', 'SGA_v2.0_scaffold1G00174' => 'sas', 'SGA_v2.0_scaffold22G09714' => 'sas', 'SGA_v2.0_scaffold333G48992' => 'sas', 'SGA_v2.0_scaffold46G17491' => 'sas', 'SGA_v2.0_scaffold49G18294' => 'sas', 'SGA_v2.0_scaffold63G21658' => 'sas', 'SHI01741' => 'shi', 'SHI05771' => 'shi', 'SHI18077' => 'shi', 'SHI20525' => 'shi', 'SHI20527' => 'shi', 'SHI20528' => 'shi', 'SMO172G0185' => 'smo', 'SMO198G0020' => 'smo', 'SMO351G0006' => 'smo', 'SMO356G0118' => 'smo', 'SMO358G0296' => 'smo', 'SMO367G0079' => 'smo', 'SMO367G1277' => 'smo', 'Solyc01g014220.3' => 'sly', 'Solyc01g111770.2' => 'sly', 'Solyc02g078180.3' => 'sly', 'Solyc03g006430.3' => 'sly', 'Solyc03g006456.1' => 'sly', 'Solyc03g079860.2' => 'sly', 'Solyc04g079770.3' => 'sly', 'Solyc05g007430.4' => 'sly', 'Solyc07g063150.3' => 'sly', 'Solyc08g016620.3' => 'sly', 'Solyc09g057590.3' => 'sly', 'Solyc09g057600.1' => 'sly', 'Solyc10g009050.3' => 'sly', 'Solyc11g017420.2' => 'sly', 'Sopen01g053810' => 'spe', 'Sopen02g023040' => 'spe', 'Sopen03g002440' => 'spe', 'Sopen04g033350' => 'spe', 'Sopen05g003310' => 'spe', 'Sopen07g004050' => 'spe', 'Sopen07g031340' => 'spe', 'Sopen08g006990' => 'spe', 'Sopen10g004830' => 'spe', 'Sopen11g009370' => 'spe', 'Sp1g24450' => 'spa', 'Sp1g29670' => 'spa', 'Sp1g39600' => 'spa', 'Sp2g11080' => 'spa', 'Sp2g13970' => 'spa', 'Sp4g16130' => 'spa', 'Sp6g13080' => 'spa', 'Sp7g37270' => 'spa', 'TAR371G0065' => 'tar', 'TAR376G0340' => 'tar', 'TAR376G0435' => 'tar', 'TAR381G0002' => 'tar', 'TAR381G1236' => 'tar', 'TAR624G0055' => 'tar', 'TAR624G0324' => 'tar', 'TAR624G0696' => 'tar', 'TAR624G0906' => 'tar', 'TAR625G0107' => 'tar', 'TAR626G0015' => 'tar', 'TAR626G1356' => 'tar', 'TAR627G0888' => 'tar', 'TAR628G0399' => 'tar', 'TAR628G1327' => 'tar', 'TAR629G2831' => 'tar', 'TAR629G2874' => 'tar', 'TAR633G1432' => 'tar', 'TAR633G2771' => 'tar', 'THA.LOC104803394' => 'tha', 'THA.LOC104805153' => 'tha', 'THA.LOC104806784' => 'tha', 'THA.LOC104810473' => 'tha', 'THA.LOC104813100' => 'tha', 'THA.LOC104814215' => 'tha', 'THA.LOC104815554' => 'tha', 'THA.LOC104820544' => 'tha', 'THA.LOC104824754' => 'tha', 'THA.LOC104827717' => 'tha', 'Thecc.02G031400' => 'tca', 'Thecc.02G055900' => 'tca', 'Thecc.02G350800' => 'tca', 'Thecc.06G150900' => 'tca', 'Thecc.06G186600' => 'tca', 'Thecc.07G089600' => 'tca', 'Thecc.08G020400' => 'tca', 'Thecc.08G182100' => 'tca', 'Thhalv10000873m.g' => 'esa', 'Thhalv10004185m.g' => 'esa', 'Thhalv10006981m.g' => 'esa', 'Thhalv10007204m.g' => 'esa', 'Thhalv10011374m.g' => 'esa', 'Thhalv10013482m.g' => 'esa', 'Thhalv10017801m.g' => 'esa', 'Thhalv10024983m.g' => 'esa', 'TPR.G12072' => 'tpr', 'TPR.G15769' => 'tpr', 'TPR.G16504' => 'tpr', 'TPR.G16506' => 'tpr', 'TPR.G24345' => 'tpr', 'TPR.G26666' => 'tpr', 'TPR.G27320' => 'tpr', 'TPR.G31819' => 'tpr', 'TPR.G38879' => 'tpr', 'TPR.G39015' => 'tpr', 'TPR.G8819' => 'tpr', 'TWI09G0924' => 'twi', 'TWI12G0811' => 'twi', 'TWI12G1294' => 'twi', 'TWI31G0150' => 'twi', 'TWI36G1262' => 'twi', 'TWI38G1287' => 'twi', 'TWI38G1633' => 'twi', 'TWI38G1982' => 'twi', 'TWI39G0116' => 'twi', 'TWI60G1011' => 'twi', 'TWI63G0171' => 'twi', 'TWI73G0839' => 'twi', 'TWI79G1511' => 'twi', 'unitig_0.g915' => 'ugi', 'unitig_0.g916' => 'ugi', 'unitig_21.g20219' => 'ugi', 'unitig_21.g20416' => 'ugi', 'unitig_578.g16132' => 'ugi', 'unitig_578.g16718' => 'ugi', 'unitig_62.g23481' => 'ugi', 'unitig_744.g24535' => 'ugi', 'unitig_749.g13525' => 'ugi', 'vmacro01248' => 'vma', 'vmacro02290' => 'vma', 'vmacro10946' => 'vma', 'vmacro11865' => 'vma', 'vmacro12493' => 'vma', 'vmacro17322' => 'vma', 'vmacro21599' => 'vma', 'vmacro23041' => 'vma', 'VMungo0251G0004' => 'vmu', 'VMungo0251G2639' => 'vmu', 'VMungo0251G2967' => 'vmu', 'VMungo0540G0864' => 'vmu', 'VMungo0540G1569' => 'vmu', 'VMungo0647G0317' => 'vmu', 'VMungo0720G1373' => 'vmu', 'VMungo0720G1508' => 'vmu', 'VMungo1080G0485' => 'vmu', 'VMungo1215G3177' => 'vmu', 'Zm00001eb112600' => 'zma', 'Zm00001eb120220' => 'zma', 'Zm00001eb153240' => 'zma', 'Zm00001eb168880' => 'zma', 'Zm00001eb213920' => 'zma', 'Zm00001eb228280' => 'zma', 'Zm00001eb254580' => 'zma', 'Zm00001eb272180' => 'zma', 'Zm00001eb293190' => 'zma', 'Zm00001eb322930' => 'zma', 'Zm00001eb353360' => 'zma', 'Zm00001eb353390' => 'zma', 'Zm00001eb353430' => 'zma', 'Zm00001eb353440' => 'zma', 'Zm00001eb353780' => 'zma' ), 'gf_id' => 'HOM05D000499', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000499' ), 'data_identifier' => 'HOM05D000499', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000499', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1066', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p29780' => 'bna', 'A02p33180' => 'bna', 'A03p16470' => 'bna', 'A03p66010' => 'bna', 'A04p25970' => 'bna', 'A06p01270' => 'bna', 'A06p46080' => 'bna', 'A07p11400' => 'bna', 'A08p01840' => 'bna', 'A08p08230' => 'bna', 'A08p25740' => 'bna', 'A09p32070' => 'bna', 'A09p37830' => 'bna', 'A09p42840' => 'bna', 'A09p42850' => 'bna', 'Aa31LG10G2060' => 'aar', 'Aa31LG2G7410' => 'aar', 'Aa31LG6G10200' => 'aar', 'Aa31LG6G16680' => 'aar', 'Aa31LG6G8470' => 'aar', 'Aa31LG9G12730' => 'aar', 'Aa31LG9G13680' => 'aar', 'Aa31LG9G14920' => 'aar', 'Aa31LG9G6650' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4977' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5467' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3254' => 'aag', 'Actinidia02578' => 'ach', 'Actinidia07693' => 'ach', 'Actinidia08413' => 'ach', 'Actinidia08414' => 'ach', 'Actinidia15289' => 'ach', 'Actinidia19871' => 'ach', 'Actinidia21475' => 'ach', 'Actinidia22576' => 'ach', 'Actinidia28327' => 'ach', 'Actinidia32491' => 'ach', 'Actinidia39463' => 'ach', 'Actinidia39571' => 'ach', 'Ah.01g013750' => 'amhyb', 'Ah.01g023210' => 'amhyb', 'Ah.04g164850' => 'amhyb', 'Ah.05g178060' => 'amhyb', 'Ah.07g204270' => 'amhyb', 'Ah.07g208480' => 'amhyb', 'Ah.09g237410' => 'amhyb', 'Ah.14g089460' => 'amhyb', 'AL1G41790' => 'aly', 'AL1G49050' => 'aly', 'AL1G53810' => 'aly', 'AL1G61400' => 'aly', 'AL4G18580' => 'aly', 'AL5G12510' => 'aly', 'AL5G12540' => 'aly', 'AL6G43230' => 'aly', 'AL7G10370' => 'aly', 'AL7G19250' => 'aly', 'AL8G12240' => 'aly', 'AL8G18540' => 'aly', 'Aqoxy1G02409' => 'aox', 'Aqoxy2G03993' => 'aox', 'Aqoxy3G03357' => 'aox', 'Aqoxy4G00785' => 'aox', 'Aqoxy5G02598' => 'aox', 'Aqoxy6G00132' => 'aox', 'Aqoxy7G01776' => 'aox', 'Aqoxy7G02316' => 'aox', 'Aqoxy7G03973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.12AFKW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B8730' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27IQR1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3F75VG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3RE0GA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41TCQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.527VTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FIR39' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5W8UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DA38EV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ63HS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H1I32C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HC27T5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4M8AP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7N3CZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9UVDZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LS1NQA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT1D4B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SKC4TM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCFV76' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF9Q1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQWD9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1ZM88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WE07RT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YCK7VH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJE6Q6' => 'arhy', 'AT1G28240' => 'ath', 'AT1G34550' => 'ath', 'AT1G53040' => 'ath', 'AT2G02910' => 'ath', 'AT4G09630' => 'ath', 'AT4G38500' => 'ath', 'AT5G42660' => 'ath', 'AT5G46220' => 'ath', 'ATR0152G026' => 'atr', 'ATR0564G343' => 'atr', 'ATR0706G151' => 'atr', 'ATR0733G207' => 'atr', 'ATR0751G234' => 'atr', 'ATR0807G048' => 'atr', 'ATR1091G084' => 'atr', 'Atru.chr10.1229' => 'acertr', 'Atru.chr10.1230' => 'acertr', 'Atru.chr10.1874' => 'acertr', 'Atru.chr11.1808' => 'acertr', 'Atru.chr13.1795' => 'acertr', 'Atru.chr13.570' => 'acertr', 'Atru.chr2.2608' => 'acertr', 'Atru.chr2.2609' => 'acertr', 'Atru.chr5.3428' => 'acertr', 'Atru.chr8.1171' => 'acertr', 'AUR62004651' => 'cqu', 'AUR62008675' => 'cqu', 'AUR62010014' => 'cqu', 'AUR62013004' => 'cqu', 'AUR62014825' => 'cqu', 'AUR62015015' => 'cqu', 'AUR62015151' => 'cqu', 'AUR62017020' => 'cqu', 'AUR62019422' => 'cqu', 'AUR62023570' => 'cqu', 'AUR62025571' => 'cqu', 'AUR62029098' => 'cqu', 'AUR62033863' => 'cqu', 'AUR62034296' => 'cqu', 'AUR62040075' => 'cqu', 'BcaB02g07334' => 'bca', 'BcaB02g10575' => 'bca', 'BcaB03g12119' => 'bca', 'BcaB03g12120' => 'bca', 'BcaB03g13945' => 'bca', 'BcaB04g17123' => 'bca', 'BcaB04g17867' => 'bca', 'BcaB04g19839' => 'bca', 'BcaB07g30317' => 'bca', 'BcaB07g32432' => 'bca', 'BcaB07g33362' => 'bca', 'BcaB08g36611' => 'bca', 'BcaC01g00028' => 'bca', 'BcaC01g01356' => 'bca', 'BcaC01g02034' => 'bca', 'BcaC01g06051' => 'bca', 'BcaC03g16839' => 'bca', 'BcaC03g17176' => 'bca', 'BcaC05g26829' => 'bca', 'BcaC06g31490' => 'bca', 'BcaC06g35344' => 'bca', 'BcaC06g36570' => 'bca', 'BcaC07g37537' => 'bca', 'BcaC08g43491' => 'bca', 'BcaC08g43773' => 'bca', 'BcaNung00234' => 'bca', 'BcaNung01982' => 'bca', 'BcaNung03707' => 'bca', 'BcaNung06454' => 'bca', 'BolC2t10762H' => 'bol', 'BolC2t11191H' => 'bol', 'BolC3t14322H' => 'bol', 'BolC3t19747H' => 'bol', 'BolC3t21425H' => 'bol', 'BolC4t27800H' => 'bol', 'BolC5t31423H' => 'bol', 'BolC6t35951H' => 'bol', 'BolC6t36282H' => 'bol', 'BolC7t40678H' => 'bol', 'BolC7t40679H' => 'bol', 'BolC7t42222H' => 'bol', 'BolC7t43492H' => 'bol', 'BolC7t46785H' => 'bol', 'BolC8t47853H' => 'bol', 'BolC9t56805H' => 'bol', 'BraA02t08000Z' => 'bra', 'BraA02t08341Z' => 'bra', 'BraA03t10936Z' => 'bra', 'BraA03t15657Z' => 'bra', 'BraA04t18100Z' => 'bra', 'BraA05t20523Z' => 'bra', 'BraA06t23353Z' => 'bra', 'BraA06t27473Z' => 'bra', 'BraA06t27769Z' => 'bra', 'BraA07t28928Z' => 'bra', 'BraA08t32236Z' => 'bra', 'BraA08t32841Z' => 'bra', 'BraA08t34524Z' => 'bra', 'BraA09t38742Z' => 'bra', 'BraA09t39295Z' => 'bra', 'C02p47180' => 'bna', 'C02p50990' => 'bna', 'C03p19360' => 'bna', 'C03p74950' => 'bna', 'C03p91000' => 'bna', 'C04p63260' => 'bna', 'C05p27050' => 'bna', 'C06p08750' => 'bna', 'C06p11490' => 'bna', 'C07p02820' => 'bna', 'C07p17180' => 'bna', 'C07p29440' => 'bna', 'C07p63730' => 'bna', 'C09p39260' => 'bna', 'CAN.G1164.34' => 'can', 'CAN.G1164.39' => 'can', 'CAN.G1530.3' => 'can', 'CAN.G162.61' => 'can', 'CAN.G176.6' => 'can', 'CAN.G289.49' => 'can', 'CAN.G370.21' => 'can', 'CAN.G370.22' => 'can', 'CAN.G371.117' => 'can', 'CAN.G58.37' => 'can', 'CAN.G588.98' => 'can', 'CANSAT21G2266' => 'cansat', 'CANSAT25G2799' => 'cansat', 'CANSAT35G0862' => 'cansat', 'CANSAT35G1704' => 'cansat', 'CANSAT35G1760' => 'cansat', 'CANSAT56G3971' => 'cansat', 'CANSAT56G4116' => 'cansat', 'CANSAT80G1259' => 'cansat', 'CARHR027730' => 'chi', 'CARHR033880' => 'chi', 'CARHR043270' => 'chi', 'CARHR145330' => 'chi', 'CARHR145340' => 'chi', 'CARHR175570' => 'chi', 'CARHR181570' => 'chi', 'CARHR258470' => 'chi', 'CARHR260490' => 'chi', 'CARHR294220' => 'chi', 'Carub.0001s2668' => 'cru', 'Carub.0001s3257' => 'cru', 'Carub.0001s4220' => 'cru', 'Carub.0005s0179' => 'cru', 'Carub.0006s2807' => 'cru', 'Carub.0007s0039' => 'cru', 'Carub.0008s0169' => 'cru', 'Carub.0008s0636' => 'cru', 'Ca_00338_v3' => 'car', 'Ca_00542_v3' => 'car', 'Ca_01844_v3' => 'car', 'Ca_10611_v3' => 'car', 'Ca_13326_v3' => 'car', 'Ca_17944_v3' => 'car', 'Ca_18546_v3' => 'car', 'Ca_24219_v3' => 'car', 'Ca_29972_v3' => 'car', 'CBR_g3681' => 'cbr', 'CBR_g40021' => 'cbr', 'Cc01_g08140' => 'ccan', 'Cc02_g13410' => 'ccan', 'Cc02_g37480' => 'ccan', 'Cc05_g12030' => 'ccan', 'Cc09_g03370' => 'ccan', 'Cc09_g10300' => 'ccan', 'Cc10_g03530' => 'ccan', 'Cc10_g11380' => 'ccan', 'CDE01G0176' => 'cde', 'CDE02G0675' => 'cde', 'CDE02G0942' => 'cde', 'CDE02G1153' => 'cde', 'CDE02G4177' => 'cde', 'CDE04G2117' => 'cde', 'CDE04G2736' => 'cde', 'CDE08G1161' => 'cde', 'CDE09G1238' => 'cde', 'Cfa000467' => 'cfa', 'Cfa000947' => 'cfa', 'Cfa004969' => 'cfa', 'Cfa005284' => 'cfa', 'Cfa008993' => 'cfa', 'Cfa018187' => 'cfa', 'Cfa018454' => 'cfa', 'Cfa020585' => 'cfa', 'Ciclev10000424m.g' => 'ccl', 'Ciclev10003605m.g' => 'ccl', 'Ciclev10007828m.g' => 'ccl', 'Ciclev10014620m.g' => 'ccl', 'Ciclev10015169m.g' => 'ccl', 'Ciclev10018291m.g' => 'ccl', 'Ciclev10028256m.g' => 'ccl', 'Ciclev10033822m.g' => 'ccl', 'CiPaw.05G060300' => 'cil', 'CiPaw.05G085000' => 'cil', 'CiPaw.06G083700' => 'cil', 'CiPaw.06G120300' => 'cil', 'CiPaw.09G060500' => 'cil', 'CiPaw.09G123800' => 'cil', 'CiPaw.11G169700' => 'cil', 'CiPaw.12G118300' => 'cil', 'CiPaw.15G071000' => 'cil', 'CiPaw.15G081900' => 'cil', 'ClCG01G024610' => 'cla', 'ClCG03G006070' => 'cla', 'ClCG05G019250' => 'cla', 'ClCG09G009500' => 'cla', 'ClCG11G008200' => 'cla', 'ClCG11G018080' => 'cla', 'COL.COLO4_17373' => 'col', 'COL.COLO4_22994' => 'col', 'COL.COLO4_26389' => 'col', 'COL.COLO4_27170' => 'col', 'COL.COLO4_31074' => 'col', 'COL.COLO4_31465' => 'col', 'COL.COLO4_36438' => 'col', 'COL.COLO4_36439' => 'col', 'Cpa.g.c38781' => 'cpa', 'Cpa.g.sc128.12' => 'cpa', 'Cpa.g.sc166.7' => 'cpa', 'Cpa.g.sc166.8' => 'cpa', 'Cpa.g.sc20.111' => 'cpa', 'Cpa.g.sc27.31' => 'cpa', 'Cpa.g.sc64.36' => 'cpa', 'Cpa.g.sc64.37' => 'cpa', 'Cpa.g.sc66.49' => 'cpa', 'Cpa.g.sc80.64' => 'cpa', 'CsaV3_1G012320' => 'csa', 'CsaV3_2G008480' => 'csa', 'CsaV3_2G033450' => 'csa', 'CsaV3_3G044830' => 'csa', 'CsaV3_4G033710' => 'csa', 'CsaV3_6G051730' => 'csa', 'CsaV3_7G025350' => 'csa', 'CSS0001067' => 'camsi', 'CSS0005996' => 'camsi', 'CSS0006590' => 'camsi', 'CSS0009673' => 'camsi', 'CSS0010201' => 'camsi', 'CSS0010549' => 'camsi', 'CSS0011364' => 'camsi', 'CSS0014473' => 'camsi', 'CSS0014961' => 'camsi', 'CSS0020191' => 'camsi', 'CSS0021165' => 'camsi', 'CSS0022306' => 'camsi', 'CSS0030591' => 'camsi', 'CSS0030696' => 'camsi', 'CSS0032653' => 'camsi', 'CSS0037487' => 'camsi', 'CSS0041102' => 'camsi', 'CSS0041261' => 'camsi', 'CSS0046246' => 'camsi', 'CSS0049256' => 'camsi', 'DCAR_004075' => 'dca', 'DCAR_011538' => 'dca', 'DCAR_019553' => 'dca', 'DCAR_020952' => 'dca', 'DCAR_021739' => 'dca', 'DCAR_027407' => 'dca', 'DCAR_027913' => 'dca', 'DCAR_028066' => 'dca', 'Dinv05899' => 'din', 'Dinv07563' => 'din', 'Dinv08010' => 'din', 'Dinv14125' => 'din', 'Dinv20172' => 'din', 'Dinv30743' => 'din', 'Dinv31229' => 'din', 'Dinv34162' => 'din', 'Dinv36028' => 'din', 'Dinv39368' => 'din', 'Dinv40565' => 'din', 'Dinv41706' => 'din', 'Duzib052G0089' => 'dzi', 'Duzib116G0641' => 'dzi', 'Duzib132G0069' => 'dzi', 'Duzib132G1219' => 'dzi', 'Duzib147G0278' => 'dzi', 'Duzib160G0480' => 'dzi', 'Duzib170G0661' => 'dzi', 'Duzib177G0591' => 'dzi', 'Duzib187G1353' => 'dzi', 'Duzib192G0858' => 'dzi', 'Duzib192G0883' => 'dzi', 'Duzib213G0506' => 'dzi', 'Duzib235G0289' => 'dzi', 'Duzib251G0422' => 'dzi', 'ECA232G3898' => 'eca', 'ECA233G5950' => 'eca', 'ECA234G1699' => 'eca', 'ECA234G2421' => 'eca', 'ECA236G0426' => 'eca', 'ECA236G4331' => 'eca', 'ECA248G2573' => 'eca', 'EL10Ac1g00077' => 'bvu', 'EL10Ac1g01746' => 'bvu', 'EL10Ac2g03464' => 'bvu', 'EL10Ac4g08176' => 'bvu', 'EL10Ac7g17521' => 'bvu', 'EL10Ac8g20386' => 'bvu', 'EL10Ac9g21343' => 'bvu', 'EL10Ac9g22688' => 'bvu', 'Eucgr.B03434' => 'egr', 'Eucgr.D00618' => 'egr', 'Eucgr.E02395' => 'egr', 'Eucgr.F01129' => 'egr', 'Eucgr.F02622' => 'egr', 'Eucgr.F04207' => 'egr', 'FAN01G0570' => 'fan', 'FAN03G3351' => 'fan', 'FAN06G3702' => 'fan', 'FAN07G2149' => 'fan', 'FAN10G3758' => 'fan', 'FAN11G1170' => 'fan', 'FAN11G2050' => 'fan', 'FAN11G2724' => 'fan', 'FAN12G1700' => 'fan', 'FAN12G2028' => 'fan', 'FAN15G1160' => 'fan', 'FAN15G3063' => 'fan', 'FAN16G2540' => 'fan', 'FAN16G3077' => 'fan', 'FAN16G3624' => 'fan', 'FAN17G0221' => 'fan', 'FAN20G2492' => 'fan', 'FAN20G2905' => 'fan', 'FAN21G0548' => 'fan', 'FAN21G1300' => 'fan', 'FAN22G0077' => 'fan', 'FAN22G1315' => 'fan', 'FAN24G1280' => 'fan', 'FAN24G1445' => 'fan', 'FAN24G3527' => 'fan', 'FAN25G0464' => 'fan', 'FAN25G2885' => 'fan', 'FAN25G3270' => 'fan', 'FAN27G1101' => 'fan', 'FAN27G2846' => 'fan', 'FAN27G3524' => 'fan', 'FvH4_2g11770' => 'fve', 'FvH4_2g15630' => 'fve', 'FvH4_3g05570' => 'fve', 'FvH4_3g09110' => 'fve', 'FvH4_3g19940' => 'fve', 'FvH4_4g04821' => 'fve', 'FvH4_4g31480' => 'fve', 'FvH4_7g01740' => 'fve', 'Glyma.05G130400' => 'gma', 'Glyma.05G156400' => 'gma', 'Glyma.07G197000' => 'gma', 'Glyma.08G085151' => 'gma', 'Glyma.08G114500' => 'gma', 'Glyma.08G300400' => 'gma', 'Glyma.10G215800' => 'gma', 'Glyma.12G224400' => 'gma', 'Glyma.13G179300' => 'gma', 'Glyma.13G218151' => 'gma', 'Glyma.13G238800' => 'gma', 'Glyma.13G276900' => 'gma', 'Glyma.14G078200' => 'gma', 'Glyma.15G074500' => 'gma', 'Glyma.15G094100' => 'gma', 'Glyma.17G247200' => 'gma', 'Glyma.18G120100' => 'gma', 'Glyma.20G176000' => 'gma', 'Gohir.A01G063600' => 'ghi', 'Gohir.A01G170301' => 'ghi', 'Gohir.A02G060500' => 'ghi', 'Gohir.A05G133850' => 'ghi', 'Gohir.A05G161400' => 'ghi', 'Gohir.A06G012900' => 'ghi', 'Gohir.A06G035901' => 'ghi', 'Gohir.A06G127100' => 'ghi', 'Gohir.A06G210500' => 'ghi', 'Gohir.A08G008650' => 'ghi', 'Gohir.A09G072700' => 'ghi', 'Gohir.A09G088301' => 'ghi', 'Gohir.A10G040600' => 'ghi', 'Gohir.A12G036300' => 'ghi', 'Gohir.A12G143350' => 'ghi', 'Gohir.A12G165500' => 'ghi', 'Gohir.A13G145700' => 'ghi', 'Gohir.D01G050000' => 'ghi', 'Gohir.D01G051366' => 'ghi', 'Gohir.D01G161350' => 'ghi', 'Gohir.D02G065900' => 'ghi', 'Gohir.D05G164200' => 'ghi', 'Gohir.D05G355500' => 'ghi', 'Gohir.D06G010400' => 'ghi', 'Gohir.D06G111250' => 'ghi', 'Gohir.D06G132000' => 'ghi', 'Gohir.D06G210500' => 'ghi', 'Gohir.D07G165675' => 'ghi', 'Gohir.D08G062240' => 'ghi', 'Gohir.D08G086101' => 'ghi', 'Gohir.D08G138060' => 'ghi', 'Gohir.D09G072300' => 'ghi', 'Gohir.D10G041400' => 'ghi', 'Gohir.D11G191020' => 'ghi', 'Gohir.D11G212066' => 'ghi', 'Gohir.D12G036300' => 'ghi', 'Gohir.D12G168600' => 'ghi', 'Gohir.D13G150600' => 'ghi', 'Gorai.001G057300' => 'gra', 'Gorai.002G069900' => 'gra', 'Gorai.002G200000' => 'gra', 'Gorai.003G067600' => 'gra', 'Gorai.005G074800' => 'gra', 'Gorai.006G087300' => 'gra', 'Gorai.008G037500' => 'gra', 'Gorai.008G181400' => 'gra', 'Gorai.009G169400' => 'gra', 'Gorai.009G387900' => 'gra', 'Gorai.010G013300' => 'gra', 'Gorai.010G153800' => 'gra', 'Gorai.010G255800' => 'gra', 'Gorai.011G043700' => 'gra', 'Gorai.011G198900' => 'gra', 'Gorai.013G168400' => 'gra', 'GSVIVG01005212001' => 'vvi', 'GSVIVG01006163001' => 'vvi', 'GSVIVG01009625001' => 'vvi', 'GSVIVG01014338001' => 'vvi', 'GSVIVG01020005001' => 'vvi', 'GSVIVG01021450001' => 'vvi', 'GSVIVG01023975001' => 'vvi', 'GSVIVG01034490001' => 'vvi', 'HanXRQChr04g0112071' => 'han', 'HanXRQChr05g0131151' => 'han', 'HanXRQChr09g0262371' => 'han', 'HanXRQChr09g0268401' => 'han', 'HanXRQChr10g0279241' => 'han', 'HanXRQChr10g0297961' => 'han', 'HanXRQChr11g0326231' => 'han', 'HanXRQChr11g0328471' => 'han', 'HanXRQChr16g0507941' => 'han', 'HanXRQChr17g0560211' => 'han', 'Haze_02108' => 'cav', 'Haze_02428' => 'cav', 'Haze_05593' => 'cav', 'Haze_06448' => 'cav', 'Haze_09427' => 'cav', 'Haze_12022' => 'cav', 'Haze_17612' => 'cav', 'Haze_17928' => 'cav', 'Hma1.2p1_0032F.1_g019250' => 'hma', 'Hma1.2p1_0163F.1_g072690' => 'hma', 'Hma1.2p1_0265F.1_g106710' => 'hma', 'Hma1.2p1_0286F.1_g113970' => 'hma', 'Hma1.2p1_0363F.1_g136640' => 'hma', 'Hma1.2p1_0584F.1_g183470' => 'hma', 'Hma1.2p1_0885F.1_g232570' => 'hma', 'HPP92_006022' => 'vpl', 'HPP92_007320' => 'vpl', 'HPP92_011521' => 'vpl', 'HPP92_019387' => 'vpl', 'HPP92_024038' => 'vpl', 'Hund05891' => 'sun', 'Hund06450' => 'sun', 'Hund12053' => 'sun', 'Hund16800' => 'sun', 'Hund21222' => 'sun', 'Hund22896' => 'sun', 'Hund23746' => 'sun', 'Hund27083' => 'sun', 'Lalb_Chr02g0141831' => 'lal', 'Lalb_Chr02g0141841' => 'lal', 'Lalb_Chr05g0220411' => 'lal', 'Lalb_Chr06g0162081' => 'lal', 'Lalb_Chr09g0327651' => 'lal', 'Lalb_Chr13g0295051' => 'lal', 'Lalb_Chr15g0086801' => 'lal', 'Lalb_Chr16g0383781' => 'lal', 'Lalb_Chr16g0383791' => 'lal', 'Lalb_Chr18g0055441' => 'lal', 'Lalb_Chr18g0059611' => 'lal', 'Lalb_Chr20g0109661' => 'lal', 'Lalb_Chr20g0109831' => 'lal', 'Lalb_Chr20g0121871' => 'lal', 'Lalb_Chr22g0355361' => 'lal', 'Lalb_Chr25g0286371' => 'lal', 'Lj1A1187G43' => 'lonja', 'Lj1A1205T50' => 'lonja', 'Lj1A800G33' => 'lonja', 'Lj1C1187T7' => 'lonja', 'Lj1C843T11' => 'lonja', 'Lj1g0010940' => 'lja', 'Lj2A288T69' => 'lonja', 'Lj3g0024276' => 'lja', 'Lj4A47T76' => 'lonja', 'Lj4g0005805' => 'lja', 'Lj4g0006097' => 'lja', 'Lj4g0008528' => 'lja', 'Lj4g0024907' => 'lja', 'Lj5g0012472' => 'lja', 'Lj5g0018648' => 'lja', 'Lj6C789G1' => 'lonja', 'Lj6g0004000' => 'lja', 'Lj7A292G67' => 'lonja', 'Lj7A292T64' => 'lonja', 'Lj9A400T58' => 'lonja', 'Lsat_1_v5_gn_1_126181' => 'lsa', 'Lsat_1_v5_gn_4_123041' => 'lsa', 'Lsat_1_v5_gn_4_133620' => 'lsa', 'Lsat_1_v5_gn_4_53221' => 'lsa', 'Lsat_1_v5_gn_4_71961' => 'lsa', 'Lsat_1_v5_gn_7_105241' => 'lsa', 'Lsat_1_v5_gn_7_21361' => 'lsa', 'Lsat_1_v5_gn_7_28860' => 'lsa', 'Lsat_1_v5_gn_7_31260' => 'lsa', 'Lsat_1_v5_gn_8_52801' => 'lsa', 'Manes.02G191400' => 'mes', 'Manes.03G110100' => 'mes', 'Manes.04G071100' => 'mes', 'Manes.05G100500' => 'mes', 'Manes.05G164700' => 'mes', 'Manes.15G087000' => 'mes', 'Manes.15G121500' => 'mes', 'Manes.16G028300' => 'mes', 'Manes.17G046100' => 'mes', 'Manes.17G069800' => 'mes', 'Manes.18G100500' => 'mes', 'Mapoly0002s0109' => 'mpo', 'Mapoly0024s0007' => 'mpo', 'Mapoly0089s0032' => 'mpo', 'MBI04_g42241_MAGBIO' => 'mbi', 'MBI05_g11988_MAGBIO' => 'mbi', 'MBI05_g35452_MAGBIO' => 'mbi', 'MBI07_g30179_MAGBIO' => 'mbi', 'MBI07_g35859_MAGBIO' => 'mbi', 'MBI07_g35860_MAGBIO' => 'mbi', 'MBI07_g37166_MAGBIO' => 'mbi', 'MBI08_g18172_MAGBIO' => 'mbi', 'MBI09_g08441_MAGBIO' => 'mbi', 'MBI13_g01676_MAGBIO' => 'mbi', 'MBI14_g42955_MAGBIO' => 'mbi', 'MBI16_g13161_MAGBIO' => 'mbi', 'MBI17_g27204_MAGBIO' => 'mbi', 'MBI19_g21595_MAGBIO' => 'mbi', 'MD00G1148400' => 'mdo', 'MD02G1301200' => 'mdo', 'MD03G1227800' => 'mdo', 'MD05G1041100' => 'mdo', 'MD05G1124800' => 'mdo', 'MD05G1284000' => 'mdo', 'MD05G1338800' => 'mdo', 'MD05G1338900' => 'mdo', 'MD07G1022800' => 'mdo', 'MD10G1047500' => 'mdo', 'MD10G1127500' => 'mdo', 'MD10G1262300' => 'mdo', 'MD10G1293800' => 'mdo', 'MD16G1074300' => 'mdo', 'Medtr1g021670' => 'mtr', 'Medtr1g096320' => 'mtr', 'Medtr2g013690' => 'mtr', 'Medtr2g019450' => 'mtr', 'Medtr2g085170' => 'mtr', 'Medtr4g088785' => 'mtr', 'Medtr8g055930' => 'mtr', 'Medtr8g085850' => 'mtr', 'MELO3C002605.2' => 'cme', 'MELO3C003891.2' => 'cme', 'MELO3C004012.2' => 'cme', 'MELO3C007134.2' => 'cme', 'MELO3C008118.2' => 'cme', 'MELO3C016700.2' => 'cme', 'MELO3C024127.2' => 'cme', 'MELO3C033361.2' => 'cme', 'MELO3C033362.2' => 'cme', 'Migut.C00430' => 'egut', 'Migut.C01246' => 'egut', 'Migut.E00101' => 'egut', 'Migut.H01486' => 'egut', 'Migut.H01939' => 'egut', 'Migut.K00360' => 'egut', 'Migut.M00910' => 'egut', 'Migut.M01139' => 'egut', 'Migut.N02677' => 'egut', 'MSTRG.13252' => 'ama', 'MSTRG.14701' => 'ama', 'MSTRG.1521' => 'ama', 'MSTRG.15884' => 'ama', 'MSTRG.16242' => 'ama', 'MSTRG.22285' => 'ama', 'MSTRG.22444' => 'ama', 'MSTRG.2349' => 'ama', 'MSTRG.26308' => 'ama', 'MSTRG.28296' => 'ama', 'MSTRG.9895' => 'ama', 'Nitab4.5_0000110g0060' => 'nta', 'Nitab4.5_0000420g0130' => 'nta', 'Nitab4.5_0000422g0030' => 'nta', 'Nitab4.5_0000560g0180' => 'nta', 'Nitab4.5_0000703g0100' => 'nta', 'Nitab4.5_0000786g0200' => 'nta', 'Nitab4.5_0001336g0020' => 'nta', 'Nitab4.5_0001796g0030' => 'nta', 'Nitab4.5_0003348g0060' => 'nta', 'Nitab4.5_0003698g0040' => 'nta', 'Nitab4.5_0003942g0090' => 'nta', 'Nitab4.5_0004775g0070' => 'nta', 'Nitab4.5_0004864g0030' => 'nta', 'Nitab4.5_0005615g0020' => 'nta', 'Nitab4.5_0009288g0030' => 'nta', 'Nitab4.5_0009341g0010' => 'nta', 'Nitab4.5_0009535g0010' => 'nta', 'Nn1g03995' => 'nnu', 'Nn1g04100' => 'nnu', 'Nn1g06530' => 'nnu', 'Nn3g16404' => 'nnu', 'Nn3g17212' => 'nnu', 'Nn3g20776' => 'nnu', 'Nn3g21923' => 'nnu', 'Nn5g27737' => 'nnu', 'Nn5g29461' => 'nnu', 'Nn7g38355' => 'nnu', 'Nn8g39873' => 'nnu', 'Oeu000548.2' => 'oeu', 'Oeu004672.1' => 'oeu', 'Oeu015605.2' => 'oeu', 'Oeu016092.1' => 'oeu', 'Oeu017879.3' => 'oeu', 'Oeu024910.1' => 'oeu', 'Oeu028965.1' => 'oeu', 'Oeu031269.1' => 'oeu', 'Oeu031270.1' => 'oeu', 'Oeu032535.1' => 'oeu', 'Oeu034151.1' => 'oeu', 'Oeu034152.1' => 'oeu', 'Oeu034588.2' => 'oeu', 'Oeu050846.1' => 'oeu', 'Oeu050849.2' => 'oeu', 'Oeu051063.2' => 'oeu', 'Oeu052368.1' => 'oeu', 'Oeu052370.1' => 'oeu', 'Os01g0210400' => 'osa', 'Os01g0304300' => 'osa', 'Os01g0749100' => 'osa', 'Os02g0745800' => 'osa', 'Os03g0769050' => 'osa', 'Os05g0531500' => 'osa', 'Os06g0724300' => 'osa', 'Os11g0198100' => 'osa', 'Peaxi162Scf00069g01425' => 'pax', 'Peaxi162Scf00280g00811' => 'pax', 'Peaxi162Scf00310g00615' => 'pax', 'Peaxi162Scf00362g00542' => 'pax', 'Peaxi162Scf00461g00310' => 'pax', 'Peaxi162Scf00530g00118' => 'pax', 'Peaxi162Scf00541g00057' => 'pax', 'Peaxi162Scf00661g00017' => 'pax', 'Peaxi162Scf00926g00027' => 'pax', 'Peaxi162Scf01064g00263' => 'pax', 'Peaxi162Scf01211g00135' => 'pax', 'PGR004G2336' => 'pgr', 'PGR042G0327' => 'pgr', 'PGR042G1957' => 'pgr', 'PGR042G2003' => 'pgr', 'PGR042G3929' => 'pgr', 'PGR083G1137' => 'pgr', 'PGR083G1364' => 'pgr', 'PGSC0003DMG400003381' => 'stu', 'PGSC0003DMG400003417' => 'stu', 'PGSC0003DMG400008981' => 'stu', 'PGSC0003DMG400012417' => 'stu', 'PGSC0003DMG400012823' => 'stu', 'PGSC0003DMG400016885' => 'stu', 'PGSC0003DMG400022812' => 'stu', 'PGSC0003DMG400029726' => 'stu', 'PGSC0003DMG401009243' => 'stu', 'PGSC0003DMG401031505' => 'stu', 'PGSC0003DMG402031505' => 'stu', 'Phvul.001G017600' => 'pvu', 'Phvul.002G193500' => 'pvu', 'Phvul.002G228900' => 'pvu', 'Phvul.002G236800' => 'pvu', 'Phvul.003G049500' => 'pvu', 'Phvul.005G072000' => 'pvu', 'Phvul.006G164800' => 'pvu', 'Phvul.006G185100' => 'pvu', 'Phvul.007G090000' => 'pvu', 'Potri.001G399800' => 'ptr', 'Potri.002G149900' => 'ptr', 'Potri.004G044100' => 'ptr', 'Potri.004G177600' => 'ptr', 'Potri.009G138000' => 'ptr', 'Potri.010G094000' => 'ptr', 'Potri.011G053000' => 'ptr', 'Potri.011G119300' => 'ptr', 'Potri.013G113700' => 'ptr', 'Potri.018G107800' => 'ptr', 'Potri.019G084100' => 'ptr', 'Pp3c14_23720' => 'ppa', 'Pp3c16_6340' => 'ppa', 'Pp3c23_13420' => 'ppa', 'Pp3c24_2740' => 'ppa', 'Pp3c25_860' => 'ppa', 'Pp3c8_21750' => 'ppa', 'Prupe.1G273000' => 'ppe', 'Prupe.1G273700' => 'ppe', 'Prupe.1G274100' => 'ppe', 'Prupe.2G023300' => 'ppe', 'Prupe.4G048000' => 'ppe', 'Prupe.4G080400' => 'ppe', 'Prupe.4G181200' => 'ppe', 'Prupe.8G056900' => 'ppe', 'Prupe.8G168700' => 'ppe', 'Psat1g189080' => 'psa', 'Psat1g204760' => 'psa', 'Psat4g175560' => 'psa', 'Psat4g177720' => 'psa', 'Psat5g244240' => 'psa', 'Psat6g010720' => 'psa', 'Psat6g187200' => 'psa', 'Psat7g072040' => 'psa', 'PSO017G3501' => 'pso', 'PSO063G2148' => 'pso', 'PSO063G5608' => 'pso', 'PSO210G6392' => 'pso', 'PSO541G2319' => 'pso', 'PSO541G2836' => 'pso', 'PSO541G4012' => 'pso', 'PSO541G6253' => 'pso', 'PSO675G0580' => 'pso', 'PSO675G0856' => 'pso', 'PSO675G5635' => 'pso', 'PSO675G9157' => 'pso', 'PSO832G1660' => 'pso', 'PSO832G1969' => 'pso', 'QL02p007186' => 'qlo', 'QL02p033904' => 'qlo', 'QL03p064391' => 'qlo', 'QL05p040593' => 'qlo', 'QL05p058242' => 'qlo', 'QL08p021825' => 'qlo', 'QL11p004981' => 'qlo', 'RcHm_v2.0_Chr1g0318301' => 'rch', 'RcHm_v2.0_Chr4g0418501' => 'rch', 'RcHm_v2.0_Chr4g0439971' => 'rch', 'RcHm_v2.0_Chr5g0008541' => 'rch', 'RcHm_v2.0_Chr5g0014101' => 'rch', 'RcHm_v2.0_Chr5g0014131' => 'rch', 'RcHm_v2.0_Chr5g0033621' => 'rch', 'RcHm_v2.0_Chr6g0272041' => 'rch', 'RcHm_v2.0_Chr6g0278831' => 'rch', 'Rhsim02G0130400' => 'rsi', 'Rhsim02G0171100' => 'rsi', 'Rhsim05G0053000' => 'rsi', 'Rhsim05G0053100' => 'rsi', 'Rhsim06G0096500' => 'rsi', 'Rhsim06G0096600' => 'rsi', 'Rhsim06G0199100' => 'rsi', 'Rhsim12G0062300' => 'rsi', 'Rhsim12G0062800' => 'rsi', 'Sabra02G0118600' => 'sbr', 'Sabra04G0027300' => 'sbr', 'Sabra04G0119500' => 'sbr', 'Sabra08G0112500' => 'sbr', 'Sabra11G0036800' => 'sbr', 'Sabra11G0103800' => 'sbr', 'Sabra13G0096300' => 'sbr', 'Sabra16G0262300' => 'sbr', 'Sabra18G0091700' => 'sbr', 'Sabra19G0095400' => 'sbr', 'SalBow6G3080' => 'sbo', 'SalBow7G1157' => 'sbo', 'SalBow7G2123' => 'sbo', 'SalBow7G2285' => 'sbo', 'SalBow7G3537' => 'sbo', 'SalBow8G2947' => 'sbo', 'SalBow8G4463' => 'sbo', 'SalBow8G5466' => 'sbo', 'Sc01g0001750' => 'sci', 'Sc02g0006640' => 'sci', 'Sc02g0006670' => 'sci', 'Sc04g0008220' => 'sci', 'Sc05g0006190' => 'sci', 'Sc08g0002760' => 'sci', 'Sc17g0006170' => 'sci', 'Sc22g0002050' => 'sci', 'Sc23g0001190' => 'sci', 'Sc24g0000980' => 'sci', 'Sed0006245' => 'sed', 'Sed0007543' => 'sed', 'Sed0009411' => 'sed', 'Sed0010765' => 'sed', 'Sed0012944' => 'sed', 'Sed0014682' => 'sed', 'Sed0016174' => 'sed', 'Sed0016796' => 'sed', 'Sed0020317' => 'sed', 'Sed0021467' => 'sed', 'SEGI_01316' => 'sgi', 'SEGI_03374' => 'sgi', 'SEGI_16265' => 'sgi', 'SEGI_18569' => 'sgi', 'SEGI_20351' => 'sgi', 'SEGI_26395' => 'sgi', 'SEGI_29469' => 'sgi', 'SEGI_34771' => 'sgi', 'SEGI_36769' => 'sgi', 'SEGI_37139' => 'sgi', 'SGA_v2.0_scaffold100G29687' => 'sas', 'SGA_v2.0_scaffold118G32472' => 'sas', 'SGA_v2.0_scaffold14G07051' => 'sas', 'SGA_v2.0_scaffold183G39845' => 'sas', 'SGA_v2.0_scaffold1G00174' => 'sas', 'SGA_v2.0_scaffold22G09714' => 'sas', 'SGA_v2.0_scaffold333G48992' => 'sas', 'SGA_v2.0_scaffold46G17491' => 'sas', 'SGA_v2.0_scaffold49G18294' => 'sas', 'SGA_v2.0_scaffold63G21658' => 'sas', 'SHI01741' => 'shi', 'SHI05771' => 'shi', 'SHI18077' => 'shi', 'SHI20525' => 'shi', 'SHI20527' => 'shi', 'SHI20528' => 'shi', 'SMO172G0185' => 'smo', 'SMO198G0020' => 'smo', 'SMO351G0006' => 'smo', 'SMO356G0118' => 'smo', 'SMO358G0296' => 'smo', 'SMO367G0079' => 'smo', 'SMO367G1277' => 'smo', 'Solyc01g014220.3' => 'sly', 'Solyc01g111770.2' => 'sly', 'Solyc02g078180.3' => 'sly', 'Solyc03g006430.3' => 'sly', 'Solyc03g006456.1' => 'sly', 'Solyc03g079860.2' => 'sly', 'Solyc04g079770.3' => 'sly', 'Solyc05g007430.4' => 'sly', 'Solyc07g063150.3' => 'sly', 'Solyc08g016620.3' => 'sly', 'Solyc09g057590.3' => 'sly', 'Solyc09g057600.1' => 'sly', 'Solyc10g009050.3' => 'sly', 'Solyc11g017420.2' => 'sly', 'Sopen01g053810' => 'spe', 'Sopen02g023040' => 'spe', 'Sopen03g002440' => 'spe', 'Sopen04g033350' => 'spe', 'Sopen05g003310' => 'spe', 'Sopen07g004050' => 'spe', 'Sopen07g031340' => 'spe', 'Sopen08g006990' => 'spe', 'Sopen10g004830' => 'spe', 'Sopen11g009370' => 'spe', 'Sp1g24450' => 'spa', 'Sp1g29670' => 'spa', 'Sp1g39600' => 'spa', 'Sp2g11080' => 'spa', 'Sp2g13970' => 'spa', 'Sp4g16130' => 'spa', 'Sp6g13080' => 'spa', 'Sp7g37270' => 'spa', 'TAR371G0065' => 'tar', 'TAR376G0340' => 'tar', 'TAR376G0435' => 'tar', 'TAR381G0002' => 'tar', 'TAR381G1236' => 'tar', 'TAR624G0055' => 'tar', 'TAR624G0324' => 'tar', 'TAR624G0696' => 'tar', 'TAR624G0906' => 'tar', 'TAR625G0107' => 'tar', 'TAR626G0015' => 'tar', 'TAR626G1356' => 'tar', 'TAR627G0888' => 'tar', 'TAR628G0399' => 'tar', 'TAR628G1327' => 'tar', 'TAR629G2831' => 'tar', 'TAR629G2874' => 'tar', 'TAR633G1432' => 'tar', 'TAR633G2771' => 'tar', 'THA.LOC104803394' => 'tha', 'THA.LOC104805153' => 'tha', 'THA.LOC104806784' => 'tha', 'THA.LOC104810473' => 'tha', 'THA.LOC104813100' => 'tha', 'THA.LOC104814215' => 'tha', 'THA.LOC104815554' => 'tha', 'THA.LOC104820544' => 'tha', 'THA.LOC104824754' => 'tha', 'THA.LOC104827717' => 'tha', 'Thecc.02G031400' => 'tca', 'Thecc.02G055900' => 'tca', 'Thecc.02G350800' => 'tca', 'Thecc.06G150900' => 'tca', 'Thecc.06G186600' => 'tca', 'Thecc.07G089600' => 'tca', 'Thecc.08G020400' => 'tca', 'Thecc.08G182100' => 'tca', 'Thhalv10000873m.g' => 'esa', 'Thhalv10004185m.g' => 'esa', 'Thhalv10006981m.g' => 'esa', 'Thhalv10007204m.g' => 'esa', 'Thhalv10011374m.g' => 'esa', 'Thhalv10013482m.g' => 'esa', 'Thhalv10017801m.g' => 'esa', 'Thhalv10024983m.g' => 'esa', 'TPR.G12072' => 'tpr', 'TPR.G15769' => 'tpr', 'TPR.G16504' => 'tpr', 'TPR.G16506' => 'tpr', 'TPR.G24345' => 'tpr', 'TPR.G26666' => 'tpr', 'TPR.G27320' => 'tpr', 'TPR.G31819' => 'tpr', 'TPR.G38879' => 'tpr', 'TPR.G39015' => 'tpr', 'TPR.G8819' => 'tpr', 'TWI09G0924' => 'twi', 'TWI12G0811' => 'twi', 'TWI12G1294' => 'twi', 'TWI31G0150' => 'twi', 'TWI36G1262' => 'twi', 'TWI38G1287' => 'twi', 'TWI38G1633' => 'twi', 'TWI38G1982' => 'twi', 'TWI39G0116' => 'twi', 'TWI60G1011' => 'twi', 'TWI63G0171' => 'twi', 'TWI73G0839' => 'twi', 'TWI79G1511' => 'twi', 'unitig_0.g915' => 'ugi', 'unitig_0.g916' => 'ugi', 'unitig_21.g20219' => 'ugi', 'unitig_21.g20416' => 'ugi', 'unitig_578.g16132' => 'ugi', 'unitig_578.g16718' => 'ugi', 'unitig_62.g23481' => 'ugi', 'unitig_744.g24535' => 'ugi', 'unitig_749.g13525' => 'ugi', 'vmacro01248' => 'vma', 'vmacro02290' => 'vma', 'vmacro10946' => 'vma', 'vmacro11865' => 'vma', 'vmacro12493' => 'vma', 'vmacro17322' => 'vma', 'vmacro21599' => 'vma', 'vmacro23041' => 'vma', 'VMungo0251G0004' => 'vmu', 'VMungo0251G2639' => 'vmu', 'VMungo0251G2967' => 'vmu', 'VMungo0540G0864' => 'vmu', 'VMungo0540G1569' => 'vmu', 'VMungo0647G0317' => 'vmu', 'VMungo0720G1373' => 'vmu', 'VMungo0720G1508' => 'vmu', 'VMungo1080G0485' => 'vmu', 'VMungo1215G3177' => 'vmu', 'Zm00001eb112600' => 'zma', 'Zm00001eb120220' => 'zma', 'Zm00001eb153240' => 'zma', 'Zm00001eb168880' => 'zma', 'Zm00001eb213920' => 'zma', 'Zm00001eb228280' => 'zma', 'Zm00001eb254580' => 'zma', 'Zm00001eb272180' => 'zma', 'Zm00001eb293190' => 'zma', 'Zm00001eb322930' => 'zma', 'Zm00001eb353360' => 'zma', 'Zm00001eb353390' => 'zma', 'Zm00001eb353430' => 'zma', 'Zm00001eb353440' => 'zma', 'Zm00001eb353780' => 'zma' ) $gf_id = 'HOM05D000499' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000499' ) $data_identifier = 'HOM05D000499' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 29, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 12, 'amhyb' => (int) 8, 'aly' => (int) 12, 'aox' => (int) 9, 'arhy' => (int) 26, 'ath' => (int) 8, 'atr' => (int) 7, 'acertr' => (int) 10, 'cqu' => (int) 15, 'bca' => (int) 29, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 11, 'cansat' => (int) 8, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 9, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 8, 'cpa' => (int) 10, 'csa' => (int) 7, 'camsi' => (int) 20, 'dca' => (int) 8, 'din' => (int) 12, 'dzi' => (int) 14, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 6, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 38, 'gra' => (int) 16, 'vvi' => (int) 8, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 5, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 11, 'lja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 11, 'mpo' => (int) 3, 'mbi' => (int) 14, 'mdo' => (int) 14, 'mtr' => (int) 8, 'cme' => (int) 9, 'egut' => (int) 9, 'ama' => (int) 11, 'nta' => (int) 17, 'nnu' => (int) 11, 'oeu' => (int) 18, 'osa' => (int) 8, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 6, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 9, 'rsi' => (int) 9, 'sbr' => (int) 10, 'sbo' => (int) 8, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 10, 'sas' => (int) 10, 'shi' => (int) 6, 'smo' => (int) 7, 'sly' => (int) 14, 'spe' => (int) 10, 'spa' => (int) 8, 'tar' => (int) 19, 'tha' => (int) 10, 'tca' => (int) 8, 'esa' => (int) 8, 'tpr' => (int) 11, 'twi' => (int) 13, 'ugi' => (int) 9, 'vma' => (int) 8, 'vmu' => (int) 10, 'zma' => (int) 15 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb353780' $species_info = array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ) $local_species = 'mpo' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000499', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1066', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p29780' => 'bna', 'A02p33180' => 'bna', 'A03p16470' => 'bna', 'A03p66010' => 'bna', 'A04p25970' => 'bna', 'A06p01270' => 'bna', 'A06p46080' => 'bna', 'A07p11400' => 'bna', 'A08p01840' => 'bna', 'A08p08230' => 'bna', 'A08p25740' => 'bna', 'A09p32070' => 'bna', 'A09p37830' => 'bna', 'A09p42840' => 'bna', 'A09p42850' => 'bna', 'Aa31LG10G2060' => 'aar', 'Aa31LG2G7410' => 'aar', 'Aa31LG6G10200' => 'aar', 'Aa31LG6G16680' => 'aar', 'Aa31LG6G8470' => 'aar', 'Aa31LG9G12730' => 'aar', 'Aa31LG9G13680' => 'aar', 'Aa31LG9G14920' => 'aar', 'Aa31LG9G6650' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4977' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5467' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3254' => 'aag', 'Actinidia02578' => 'ach', 'Actinidia07693' => 'ach', 'Actinidia08413' => 'ach', 'Actinidia08414' => 'ach', 'Actinidia15289' => 'ach', 'Actinidia19871' => 'ach', 'Actinidia21475' => 'ach', 'Actinidia22576' => 'ach', 'Actinidia28327' => 'ach', 'Actinidia32491' => 'ach', 'Actinidia39463' => 'ach', 'Actinidia39571' => 'ach', 'Ah.01g013750' => 'amhyb', 'Ah.01g023210' => 'amhyb', 'Ah.04g164850' => 'amhyb', 'Ah.05g178060' => 'amhyb', 'Ah.07g204270' => 'amhyb', 'Ah.07g208480' => 'amhyb', 'Ah.09g237410' => 'amhyb', 'Ah.14g089460' => 'amhyb', 'AL1G41790' => 'aly', 'AL1G49050' => 'aly', 'AL1G53810' => 'aly', 'AL1G61400' => 'aly', 'AL4G18580' => 'aly', 'AL5G12510' => 'aly', 'AL5G12540' => 'aly', 'AL6G43230' => 'aly', 'AL7G10370' => 'aly', 'AL7G19250' => 'aly', 'AL8G12240' => 'aly', 'AL8G18540' => 'aly', 'Aqoxy1G02409' => 'aox', 'Aqoxy2G03993' => 'aox', 'Aqoxy3G03357' => 'aox', 'Aqoxy4G00785' => 'aox', 'Aqoxy5G02598' => 'aox', 'Aqoxy6G00132' => 'aox', 'Aqoxy7G01776' => 'aox', 'Aqoxy7G02316' => 'aox', 'Aqoxy7G03973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.12AFKW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B8730' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27IQR1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3F75VG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3RE0GA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41TCQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.527VTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FIR39' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5W8UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DA38EV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ63HS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H1I32C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HC27T5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4M8AP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7N3CZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9UVDZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LS1NQA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT1D4B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SKC4TM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCFV76' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF9Q1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQWD9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1ZM88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WE07RT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YCK7VH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJE6Q6' => 'arhy', 'AT1G28240' => 'ath', 'AT1G34550' => 'ath', 'AT1G53040' => 'ath', 'AT2G02910' => 'ath', 'AT4G09630' => 'ath', 'AT4G38500' => 'ath', 'AT5G42660' => 'ath', 'AT5G46220' => 'ath', 'ATR0152G026' => 'atr', 'ATR0564G343' => 'atr', 'ATR0706G151' => 'atr', 'ATR0733G207' => 'atr', 'ATR0751G234' => 'atr', 'ATR0807G048' => 'atr', 'ATR1091G084' => 'atr', 'Atru.chr10.1229' => 'acertr', 'Atru.chr10.1230' => 'acertr', 'Atru.chr10.1874' => 'acertr', 'Atru.chr11.1808' => 'acertr', 'Atru.chr13.1795' => 'acertr', 'Atru.chr13.570' => 'acertr', 'Atru.chr2.2608' => 'acertr', 'Atru.chr2.2609' => 'acertr', 'Atru.chr5.3428' => 'acertr', 'Atru.chr8.1171' => 'acertr', 'AUR62004651' => 'cqu', 'AUR62008675' => 'cqu', 'AUR62010014' => 'cqu', 'AUR62013004' => 'cqu', 'AUR62014825' => 'cqu', 'AUR62015015' => 'cqu', 'AUR62015151' => 'cqu', 'AUR62017020' => 'cqu', 'AUR62019422' => 'cqu', 'AUR62023570' => 'cqu', 'AUR62025571' => 'cqu', 'AUR62029098' => 'cqu', 'AUR62033863' => 'cqu', 'AUR62034296' => 'cqu', 'AUR62040075' => 'cqu', 'BcaB02g07334' => 'bca', 'BcaB02g10575' => 'bca', 'BcaB03g12119' => 'bca', 'BcaB03g12120' => 'bca', 'BcaB03g13945' => 'bca', 'BcaB04g17123' => 'bca', 'BcaB04g17867' => 'bca', 'BcaB04g19839' => 'bca', 'BcaB07g30317' => 'bca', 'BcaB07g32432' => 'bca', 'BcaB07g33362' => 'bca', 'BcaB08g36611' => 'bca', 'BcaC01g00028' => 'bca', 'BcaC01g01356' => 'bca', 'BcaC01g02034' => 'bca', 'BcaC01g06051' => 'bca', 'BcaC03g16839' => 'bca', 'BcaC03g17176' => 'bca', 'BcaC05g26829' => 'bca', 'BcaC06g31490' => 'bca', 'BcaC06g35344' => 'bca', 'BcaC06g36570' => 'bca', 'BcaC07g37537' => 'bca', 'BcaC08g43491' => 'bca', 'BcaC08g43773' => 'bca', 'BcaNung00234' => 'bca', 'BcaNung01982' => 'bca', 'BcaNung03707' => 'bca', 'BcaNung06454' => 'bca', 'BolC2t10762H' => 'bol', 'BolC2t11191H' => 'bol', 'BolC3t14322H' => 'bol', 'BolC3t19747H' => 'bol', 'BolC3t21425H' => 'bol', 'BolC4t27800H' => 'bol', 'BolC5t31423H' => 'bol', 'BolC6t35951H' => 'bol', 'BolC6t36282H' => 'bol', 'BolC7t40678H' => 'bol', 'BolC7t40679H' => 'bol', 'BolC7t42222H' => 'bol', 'BolC7t43492H' => 'bol', 'BolC7t46785H' => 'bol', 'BolC8t47853H' => 'bol', 'BolC9t56805H' => 'bol', 'BraA02t08000Z' => 'bra', 'BraA02t08341Z' => 'bra', 'BraA03t10936Z' => 'bra', 'BraA03t15657Z' => 'bra', 'BraA04t18100Z' => 'bra', 'BraA05t20523Z' => 'bra', 'BraA06t23353Z' => 'bra', 'BraA06t27473Z' => 'bra', 'BraA06t27769Z' => 'bra', 'BraA07t28928Z' => 'bra', 'BraA08t32236Z' => 'bra', 'BraA08t32841Z' => 'bra', 'BraA08t34524Z' => 'bra', 'BraA09t38742Z' => 'bra', 'BraA09t39295Z' => 'bra', 'C02p47180' => 'bna', 'C02p50990' => 'bna', 'C03p19360' => 'bna', 'C03p74950' => 'bna', 'C03p91000' => 'bna', 'C04p63260' => 'bna', 'C05p27050' => 'bna', 'C06p08750' => 'bna', 'C06p11490' => 'bna', 'C07p02820' => 'bna', 'C07p17180' => 'bna', 'C07p29440' => 'bna', 'C07p63730' => 'bna', 'C09p39260' => 'bna', 'CAN.G1164.34' => 'can', 'CAN.G1164.39' => 'can', 'CAN.G1530.3' => 'can', 'CAN.G162.61' => 'can', 'CAN.G176.6' => 'can', 'CAN.G289.49' => 'can', 'CAN.G370.21' => 'can', 'CAN.G370.22' => 'can', 'CAN.G371.117' => 'can', 'CAN.G58.37' => 'can', 'CAN.G588.98' => 'can', 'CANSAT21G2266' => 'cansat', 'CANSAT25G2799' => 'cansat', 'CANSAT35G0862' => 'cansat', 'CANSAT35G1704' => 'cansat', 'CANSAT35G1760' => 'cansat', 'CANSAT56G3971' => 'cansat', 'CANSAT56G4116' => 'cansat', 'CANSAT80G1259' => 'cansat', 'CARHR027730' => 'chi', 'CARHR033880' => 'chi', 'CARHR043270' => 'chi', 'CARHR145330' => 'chi', 'CARHR145340' => 'chi', 'CARHR175570' => 'chi', 'CARHR181570' => 'chi', 'CARHR258470' => 'chi', 'CARHR260490' => 'chi', 'CARHR294220' => 'chi', 'Carub.0001s2668' => 'cru', 'Carub.0001s3257' => 'cru', 'Carub.0001s4220' => 'cru', 'Carub.0005s0179' => 'cru', 'Carub.0006s2807' => 'cru', 'Carub.0007s0039' => 'cru', 'Carub.0008s0169' => 'cru', 'Carub.0008s0636' => 'cru', 'Ca_00338_v3' => 'car', 'Ca_00542_v3' => 'car', 'Ca_01844_v3' => 'car', 'Ca_10611_v3' => 'car', 'Ca_13326_v3' => 'car', 'Ca_17944_v3' => 'car', 'Ca_18546_v3' => 'car', 'Ca_24219_v3' => 'car', 'Ca_29972_v3' => 'car', 'CBR_g3681' => 'cbr', 'CBR_g40021' => 'cbr', 'Cc01_g08140' => 'ccan', 'Cc02_g13410' => 'ccan', 'Cc02_g37480' => 'ccan', 'Cc05_g12030' => 'ccan', 'Cc09_g03370' => 'ccan', 'Cc09_g10300' => 'ccan', 'Cc10_g03530' => 'ccan', 'Cc10_g11380' => 'ccan', 'CDE01G0176' => 'cde', 'CDE02G0675' => 'cde', 'CDE02G0942' => 'cde', 'CDE02G1153' => 'cde', 'CDE02G4177' => 'cde', 'CDE04G2117' => 'cde', 'CDE04G2736' => 'cde', 'CDE08G1161' => 'cde', 'CDE09G1238' => 'cde', 'Cfa000467' => 'cfa', 'Cfa000947' => 'cfa', 'Cfa004969' => 'cfa', 'Cfa005284' => 'cfa', 'Cfa008993' => 'cfa', 'Cfa018187' => 'cfa', 'Cfa018454' => 'cfa', 'Cfa020585' => 'cfa', 'Ciclev10000424m.g' => 'ccl', 'Ciclev10003605m.g' => 'ccl', 'Ciclev10007828m.g' => 'ccl', 'Ciclev10014620m.g' => 'ccl', 'Ciclev10015169m.g' => 'ccl', 'Ciclev10018291m.g' => 'ccl', 'Ciclev10028256m.g' => 'ccl', 'Ciclev10033822m.g' => 'ccl', 'CiPaw.05G060300' => 'cil', 'CiPaw.05G085000' => 'cil', 'CiPaw.06G083700' => 'cil', 'CiPaw.06G120300' => 'cil', 'CiPaw.09G060500' => 'cil', 'CiPaw.09G123800' => 'cil', 'CiPaw.11G169700' => 'cil', 'CiPaw.12G118300' => 'cil', 'CiPaw.15G071000' => 'cil', 'CiPaw.15G081900' => 'cil', 'ClCG01G024610' => 'cla', 'ClCG03G006070' => 'cla', 'ClCG05G019250' => 'cla', 'ClCG09G009500' => 'cla', 'ClCG11G008200' => 'cla', 'ClCG11G018080' => 'cla', 'COL.COLO4_17373' => 'col', 'COL.COLO4_22994' => 'col', 'COL.COLO4_26389' => 'col', 'COL.COLO4_27170' => 'col', 'COL.COLO4_31074' => 'col', 'COL.COLO4_31465' => 'col', 'COL.COLO4_36438' => 'col', 'COL.COLO4_36439' => 'col', 'Cpa.g.c38781' => 'cpa', 'Cpa.g.sc128.12' => 'cpa', 'Cpa.g.sc166.7' => 'cpa', 'Cpa.g.sc166.8' => 'cpa', 'Cpa.g.sc20.111' => 'cpa', 'Cpa.g.sc27.31' => 'cpa', 'Cpa.g.sc64.36' => 'cpa', 'Cpa.g.sc64.37' => 'cpa', 'Cpa.g.sc66.49' => 'cpa', 'Cpa.g.sc80.64' => 'cpa', 'CsaV3_1G012320' => 'csa', 'CsaV3_2G008480' => 'csa', 'CsaV3_2G033450' => 'csa', 'CsaV3_3G044830' => 'csa', 'CsaV3_4G033710' => 'csa', 'CsaV3_6G051730' => 'csa', 'CsaV3_7G025350' => 'csa', 'CSS0001067' => 'camsi', 'CSS0005996' => 'camsi', 'CSS0006590' => 'camsi', 'CSS0009673' => 'camsi', 'CSS0010201' => 'camsi', 'CSS0010549' => 'camsi', 'CSS0011364' => 'camsi', 'CSS0014473' => 'camsi', 'CSS0014961' => 'camsi', 'CSS0020191' => 'camsi', 'CSS0021165' => 'camsi', 'CSS0022306' => 'camsi', 'CSS0030591' => 'camsi', 'CSS0030696' => 'camsi', 'CSS0032653' => 'camsi', 'CSS0037487' => 'camsi', 'CSS0041102' => 'camsi', 'CSS0041261' => 'camsi', 'CSS0046246' => 'camsi', 'CSS0049256' => 'camsi', 'DCAR_004075' => 'dca', 'DCAR_011538' => 'dca', 'DCAR_019553' => 'dca', 'DCAR_020952' => 'dca', 'DCAR_021739' => 'dca', 'DCAR_027407' => 'dca', 'DCAR_027913' => 'dca', 'DCAR_028066' => 'dca', 'Dinv05899' => 'din', 'Dinv07563' => 'din', 'Dinv08010' => 'din', 'Dinv14125' => 'din', 'Dinv20172' => 'din', 'Dinv30743' => 'din', 'Dinv31229' => 'din', 'Dinv34162' => 'din', 'Dinv36028' => 'din', 'Dinv39368' => 'din', 'Dinv40565' => 'din', 'Dinv41706' => 'din', 'Duzib052G0089' => 'dzi', 'Duzib116G0641' => 'dzi', 'Duzib132G0069' => 'dzi', 'Duzib132G1219' => 'dzi', 'Duzib147G0278' => 'dzi', 'Duzib160G0480' => 'dzi', 'Duzib170G0661' => 'dzi', 'Duzib177G0591' => 'dzi', 'Duzib187G1353' => 'dzi', 'Duzib192G0858' => 'dzi', 'Duzib192G0883' => 'dzi', 'Duzib213G0506' => 'dzi', 'Duzib235G0289' => 'dzi', 'Duzib251G0422' => 'dzi', 'ECA232G3898' => 'eca', 'ECA233G5950' => 'eca', 'ECA234G1699' => 'eca', 'ECA234G2421' => 'eca', 'ECA236G0426' => 'eca', 'ECA236G4331' => 'eca', 'ECA248G2573' => 'eca', 'EL10Ac1g00077' => 'bvu', 'EL10Ac1g01746' => 'bvu', 'EL10Ac2g03464' => 'bvu', 'EL10Ac4g08176' => 'bvu', 'EL10Ac7g17521' => 'bvu', 'EL10Ac8g20386' => 'bvu', 'EL10Ac9g21343' => 'bvu', 'EL10Ac9g22688' => 'bvu', 'Eucgr.B03434' => 'egr', 'Eucgr.D00618' => 'egr', 'Eucgr.E02395' => 'egr', 'Eucgr.F01129' => 'egr', 'Eucgr.F02622' => 'egr', 'Eucgr.F04207' => 'egr', 'FAN01G0570' => 'fan', 'FAN03G3351' => 'fan', 'FAN06G3702' => 'fan', 'FAN07G2149' => 'fan', 'FAN10G3758' => 'fan', 'FAN11G1170' => 'fan', 'FAN11G2050' => 'fan', 'FAN11G2724' => 'fan', 'FAN12G1700' => 'fan', 'FAN12G2028' => 'fan', 'FAN15G1160' => 'fan', 'FAN15G3063' => 'fan', 'FAN16G2540' => 'fan', 'FAN16G3077' => 'fan', 'FAN16G3624' => 'fan', 'FAN17G0221' => 'fan', 'FAN20G2492' => 'fan', 'FAN20G2905' => 'fan', 'FAN21G0548' => 'fan', 'FAN21G1300' => 'fan', 'FAN22G0077' => 'fan', 'FAN22G1315' => 'fan', 'FAN24G1280' => 'fan', 'FAN24G1445' => 'fan', 'FAN24G3527' => 'fan', 'FAN25G0464' => 'fan', 'FAN25G2885' => 'fan', 'FAN25G3270' => 'fan', 'FAN27G1101' => 'fan', 'FAN27G2846' => 'fan', 'FAN27G3524' => 'fan', 'FvH4_2g11770' => 'fve', 'FvH4_2g15630' => 'fve', 'FvH4_3g05570' => 'fve', 'FvH4_3g09110' => 'fve', 'FvH4_3g19940' => 'fve', 'FvH4_4g04821' => 'fve', 'FvH4_4g31480' => 'fve', 'FvH4_7g01740' => 'fve', 'Glyma.05G130400' => 'gma', 'Glyma.05G156400' => 'gma', 'Glyma.07G197000' => 'gma', 'Glyma.08G085151' => 'gma', 'Glyma.08G114500' => 'gma', 'Glyma.08G300400' => 'gma', 'Glyma.10G215800' => 'gma', 'Glyma.12G224400' => 'gma', 'Glyma.13G179300' => 'gma', 'Glyma.13G218151' => 'gma', 'Glyma.13G238800' => 'gma', 'Glyma.13G276900' => 'gma', 'Glyma.14G078200' => 'gma', 'Glyma.15G074500' => 'gma', 'Glyma.15G094100' => 'gma', 'Glyma.17G247200' => 'gma', 'Glyma.18G120100' => 'gma', 'Glyma.20G176000' => 'gma', 'Gohir.A01G063600' => 'ghi', 'Gohir.A01G170301' => 'ghi', 'Gohir.A02G060500' => 'ghi', 'Gohir.A05G133850' => 'ghi', 'Gohir.A05G161400' => 'ghi', 'Gohir.A06G012900' => 'ghi', 'Gohir.A06G035901' => 'ghi', 'Gohir.A06G127100' => 'ghi', 'Gohir.A06G210500' => 'ghi', 'Gohir.A08G008650' => 'ghi', 'Gohir.A09G072700' => 'ghi', 'Gohir.A09G088301' => 'ghi', 'Gohir.A10G040600' => 'ghi', 'Gohir.A12G036300' => 'ghi', 'Gohir.A12G143350' => 'ghi', 'Gohir.A12G165500' => 'ghi', 'Gohir.A13G145700' => 'ghi', 'Gohir.D01G050000' => 'ghi', 'Gohir.D01G051366' => 'ghi', 'Gohir.D01G161350' => 'ghi', 'Gohir.D02G065900' => 'ghi', 'Gohir.D05G164200' => 'ghi', 'Gohir.D05G355500' => 'ghi', 'Gohir.D06G010400' => 'ghi', 'Gohir.D06G111250' => 'ghi', 'Gohir.D06G132000' => 'ghi', 'Gohir.D06G210500' => 'ghi', 'Gohir.D07G165675' => 'ghi', 'Gohir.D08G062240' => 'ghi', 'Gohir.D08G086101' => 'ghi', 'Gohir.D08G138060' => 'ghi', 'Gohir.D09G072300' => 'ghi', 'Gohir.D10G041400' => 'ghi', 'Gohir.D11G191020' => 'ghi', 'Gohir.D11G212066' => 'ghi', 'Gohir.D12G036300' => 'ghi', 'Gohir.D12G168600' => 'ghi', 'Gohir.D13G150600' => 'ghi', 'Gorai.001G057300' => 'gra', 'Gorai.002G069900' => 'gra', 'Gorai.002G200000' => 'gra', 'Gorai.003G067600' => 'gra', 'Gorai.005G074800' => 'gra', 'Gorai.006G087300' => 'gra', 'Gorai.008G037500' => 'gra', 'Gorai.008G181400' => 'gra', 'Gorai.009G169400' => 'gra', 'Gorai.009G387900' => 'gra', 'Gorai.010G013300' => 'gra', 'Gorai.010G153800' => 'gra', 'Gorai.010G255800' => 'gra', 'Gorai.011G043700' => 'gra', 'Gorai.011G198900' => 'gra', 'Gorai.013G168400' => 'gra', 'GSVIVG01005212001' => 'vvi', 'GSVIVG01006163001' => 'vvi', 'GSVIVG01009625001' => 'vvi', 'GSVIVG01014338001' => 'vvi', 'GSVIVG01020005001' => 'vvi', 'GSVIVG01021450001' => 'vvi', 'GSVIVG01023975001' => 'vvi', 'GSVIVG01034490001' => 'vvi', 'HanXRQChr04g0112071' => 'han', 'HanXRQChr05g0131151' => 'han', 'HanXRQChr09g0262371' => 'han', 'HanXRQChr09g0268401' => 'han', 'HanXRQChr10g0279241' => 'han', 'HanXRQChr10g0297961' => 'han', 'HanXRQChr11g0326231' => 'han', 'HanXRQChr11g0328471' => 'han', 'HanXRQChr16g0507941' => 'han', 'HanXRQChr17g0560211' => 'han', 'Haze_02108' => 'cav', 'Haze_02428' => 'cav', 'Haze_05593' => 'cav', 'Haze_06448' => 'cav', 'Haze_09427' => 'cav', 'Haze_12022' => 'cav', 'Haze_17612' => 'cav', 'Haze_17928' => 'cav', 'Hma1.2p1_0032F.1_g019250' => 'hma', 'Hma1.2p1_0163F.1_g072690' => 'hma', 'Hma1.2p1_0265F.1_g106710' => 'hma', 'Hma1.2p1_0286F.1_g113970' => 'hma', 'Hma1.2p1_0363F.1_g136640' => 'hma', 'Hma1.2p1_0584F.1_g183470' => 'hma', 'Hma1.2p1_0885F.1_g232570' => 'hma', 'HPP92_006022' => 'vpl', 'HPP92_007320' => 'vpl', 'HPP92_011521' => 'vpl', 'HPP92_019387' => 'vpl', 'HPP92_024038' => 'vpl', 'Hund05891' => 'sun', 'Hund06450' => 'sun', 'Hund12053' => 'sun', 'Hund16800' => 'sun', 'Hund21222' => 'sun', 'Hund22896' => 'sun', 'Hund23746' => 'sun', 'Hund27083' => 'sun', 'Lalb_Chr02g0141831' => 'lal', 'Lalb_Chr02g0141841' => 'lal', 'Lalb_Chr05g0220411' => 'lal', 'Lalb_Chr06g0162081' => 'lal', 'Lalb_Chr09g0327651' => 'lal', 'Lalb_Chr13g0295051' => 'lal', 'Lalb_Chr15g0086801' => 'lal', 'Lalb_Chr16g0383781' => 'lal', 'Lalb_Chr16g0383791' => 'lal', 'Lalb_Chr18g0055441' => 'lal', 'Lalb_Chr18g0059611' => 'lal', 'Lalb_Chr20g0109661' => 'lal', 'Lalb_Chr20g0109831' => 'lal', 'Lalb_Chr20g0121871' => 'lal', 'Lalb_Chr22g0355361' => 'lal', 'Lalb_Chr25g0286371' => 'lal', 'Lj1A1187G43' => 'lonja', 'Lj1A1205T50' => 'lonja', 'Lj1A800G33' => 'lonja', 'Lj1C1187T7' => 'lonja', 'Lj1C843T11' => 'lonja', 'Lj1g0010940' => 'lja', 'Lj2A288T69' => 'lonja', 'Lj3g0024276' => 'lja', 'Lj4A47T76' => 'lonja', 'Lj4g0005805' => 'lja', 'Lj4g0006097' => 'lja', 'Lj4g0008528' => 'lja', 'Lj4g0024907' => 'lja', 'Lj5g0012472' => 'lja', 'Lj5g0018648' => 'lja', 'Lj6C789G1' => 'lonja', 'Lj6g0004000' => 'lja', 'Lj7A292G67' => 'lonja', 'Lj7A292T64' => 'lonja', 'Lj9A400T58' => 'lonja', 'Lsat_1_v5_gn_1_126181' => 'lsa', 'Lsat_1_v5_gn_4_123041' => 'lsa', 'Lsat_1_v5_gn_4_133620' => 'lsa', 'Lsat_1_v5_gn_4_53221' => 'lsa', 'Lsat_1_v5_gn_4_71961' => 'lsa', 'Lsat_1_v5_gn_7_105241' => 'lsa', 'Lsat_1_v5_gn_7_21361' => 'lsa', 'Lsat_1_v5_gn_7_28860' => 'lsa', 'Lsat_1_v5_gn_7_31260' => 'lsa', 'Lsat_1_v5_gn_8_52801' => 'lsa', 'Manes.02G191400' => 'mes', 'Manes.03G110100' => 'mes', 'Manes.04G071100' => 'mes', 'Manes.05G100500' => 'mes', 'Manes.05G164700' => 'mes', 'Manes.15G087000' => 'mes', 'Manes.15G121500' => 'mes', 'Manes.16G028300' => 'mes', 'Manes.17G046100' => 'mes', 'Manes.17G069800' => 'mes', 'Manes.18G100500' => 'mes', 'Mapoly0002s0109' => 'mpo', 'Mapoly0024s0007' => 'mpo', 'Mapoly0089s0032' => 'mpo', 'MBI04_g42241_MAGBIO' => 'mbi', 'MBI05_g11988_MAGBIO' => 'mbi', 'MBI05_g35452_MAGBIO' => 'mbi', 'MBI07_g30179_MAGBIO' => 'mbi', 'MBI07_g35859_MAGBIO' => 'mbi', 'MBI07_g35860_MAGBIO' => 'mbi', 'MBI07_g37166_MAGBIO' => 'mbi', 'MBI08_g18172_MAGBIO' => 'mbi', 'MBI09_g08441_MAGBIO' => 'mbi', 'MBI13_g01676_MAGBIO' => 'mbi', 'MBI14_g42955_MAGBIO' => 'mbi', 'MBI16_g13161_MAGBIO' => 'mbi', 'MBI17_g27204_MAGBIO' => 'mbi', 'MBI19_g21595_MAGBIO' => 'mbi', 'MD00G1148400' => 'mdo', 'MD02G1301200' => 'mdo', 'MD03G1227800' => 'mdo', 'MD05G1041100' => 'mdo', 'MD05G1124800' => 'mdo', 'MD05G1284000' => 'mdo', 'MD05G1338800' => 'mdo', 'MD05G1338900' => 'mdo', 'MD07G1022800' => 'mdo', 'MD10G1047500' => 'mdo', 'MD10G1127500' => 'mdo', 'MD10G1262300' => 'mdo', 'MD10G1293800' => 'mdo', 'MD16G1074300' => 'mdo', 'Medtr1g021670' => 'mtr', 'Medtr1g096320' => 'mtr', 'Medtr2g013690' => 'mtr', 'Medtr2g019450' => 'mtr', 'Medtr2g085170' => 'mtr', 'Medtr4g088785' => 'mtr', 'Medtr8g055930' => 'mtr', 'Medtr8g085850' => 'mtr', 'MELO3C002605.2' => 'cme', 'MELO3C003891.2' => 'cme', 'MELO3C004012.2' => 'cme', 'MELO3C007134.2' => 'cme', 'MELO3C008118.2' => 'cme', 'MELO3C016700.2' => 'cme', 'MELO3C024127.2' => 'cme', 'MELO3C033361.2' => 'cme', 'MELO3C033362.2' => 'cme', 'Migut.C00430' => 'egut', 'Migut.C01246' => 'egut', 'Migut.E00101' => 'egut', 'Migut.H01486' => 'egut', 'Migut.H01939' => 'egut', 'Migut.K00360' => 'egut', 'Migut.M00910' => 'egut', 'Migut.M01139' => 'egut', 'Migut.N02677' => 'egut', 'MSTRG.13252' => 'ama', 'MSTRG.14701' => 'ama', 'MSTRG.1521' => 'ama', 'MSTRG.15884' => 'ama', 'MSTRG.16242' => 'ama', 'MSTRG.22285' => 'ama', 'MSTRG.22444' => 'ama', 'MSTRG.2349' => 'ama', 'MSTRG.26308' => 'ama', 'MSTRG.28296' => 'ama', 'MSTRG.9895' => 'ama', 'Nitab4.5_0000110g0060' => 'nta', 'Nitab4.5_0000420g0130' => 'nta', 'Nitab4.5_0000422g0030' => 'nta', 'Nitab4.5_0000560g0180' => 'nta', 'Nitab4.5_0000703g0100' => 'nta', 'Nitab4.5_0000786g0200' => 'nta', 'Nitab4.5_0001336g0020' => 'nta', 'Nitab4.5_0001796g0030' => 'nta', 'Nitab4.5_0003348g0060' => 'nta', 'Nitab4.5_0003698g0040' => 'nta', 'Nitab4.5_0003942g0090' => 'nta', 'Nitab4.5_0004775g0070' => 'nta', 'Nitab4.5_0004864g0030' => 'nta', 'Nitab4.5_0005615g0020' => 'nta', 'Nitab4.5_0009288g0030' => 'nta', 'Nitab4.5_0009341g0010' => 'nta', 'Nitab4.5_0009535g0010' => 'nta', 'Nn1g03995' => 'nnu', 'Nn1g04100' => 'nnu', 'Nn1g06530' => 'nnu', 'Nn3g16404' => 'nnu', 'Nn3g17212' => 'nnu', 'Nn3g20776' => 'nnu', 'Nn3g21923' => 'nnu', 'Nn5g27737' => 'nnu', 'Nn5g29461' => 'nnu', 'Nn7g38355' => 'nnu', 'Nn8g39873' => 'nnu', 'Oeu000548.2' => 'oeu', 'Oeu004672.1' => 'oeu', 'Oeu015605.2' => 'oeu', 'Oeu016092.1' => 'oeu', 'Oeu017879.3' => 'oeu', 'Oeu024910.1' => 'oeu', 'Oeu028965.1' => 'oeu', 'Oeu031269.1' => 'oeu', 'Oeu031270.1' => 'oeu', 'Oeu032535.1' => 'oeu', 'Oeu034151.1' => 'oeu', 'Oeu034152.1' => 'oeu', 'Oeu034588.2' => 'oeu', 'Oeu050846.1' => 'oeu', 'Oeu050849.2' => 'oeu', 'Oeu051063.2' => 'oeu', 'Oeu052368.1' => 'oeu', 'Oeu052370.1' => 'oeu', 'Os01g0210400' => 'osa', 'Os01g0304300' => 'osa', 'Os01g0749100' => 'osa', 'Os02g0745800' => 'osa', 'Os03g0769050' => 'osa', 'Os05g0531500' => 'osa', 'Os06g0724300' => 'osa', 'Os11g0198100' => 'osa', 'Peaxi162Scf00069g01425' => 'pax', 'Peaxi162Scf00280g00811' => 'pax', 'Peaxi162Scf00310g00615' => 'pax', 'Peaxi162Scf00362g00542' => 'pax', 'Peaxi162Scf00461g00310' => 'pax', 'Peaxi162Scf00530g00118' => 'pax', 'Peaxi162Scf00541g00057' => 'pax', 'Peaxi162Scf00661g00017' => 'pax', 'Peaxi162Scf00926g00027' => 'pax', 'Peaxi162Scf01064g00263' => 'pax', 'Peaxi162Scf01211g00135' => 'pax', 'PGR004G2336' => 'pgr', 'PGR042G0327' => 'pgr', 'PGR042G1957' => 'pgr', 'PGR042G2003' => 'pgr', 'PGR042G3929' => 'pgr', 'PGR083G1137' => 'pgr', 'PGR083G1364' => 'pgr', 'PGSC0003DMG400003381' => 'stu', 'PGSC0003DMG400003417' => 'stu', 'PGSC0003DMG400008981' => 'stu', 'PGSC0003DMG400012417' => 'stu', 'PGSC0003DMG400012823' => 'stu', 'PGSC0003DMG400016885' => 'stu', 'PGSC0003DMG400022812' => 'stu', 'PGSC0003DMG400029726' => 'stu', 'PGSC0003DMG401009243' => 'stu', 'PGSC0003DMG401031505' => 'stu', 'PGSC0003DMG402031505' => 'stu', 'Phvul.001G017600' => 'pvu', 'Phvul.002G193500' => 'pvu', 'Phvul.002G228900' => 'pvu', 'Phvul.002G236800' => 'pvu', 'Phvul.003G049500' => 'pvu', 'Phvul.005G072000' => 'pvu', 'Phvul.006G164800' => 'pvu', 'Phvul.006G185100' => 'pvu', 'Phvul.007G090000' => 'pvu', 'Potri.001G399800' => 'ptr', 'Potri.002G149900' => 'ptr', 'Potri.004G044100' => 'ptr', 'Potri.004G177600' => 'ptr', 'Potri.009G138000' => 'ptr', 'Potri.010G094000' => 'ptr', 'Potri.011G053000' => 'ptr', 'Potri.011G119300' => 'ptr', 'Potri.013G113700' => 'ptr', 'Potri.018G107800' => 'ptr', 'Potri.019G084100' => 'ptr', 'Pp3c14_23720' => 'ppa', 'Pp3c16_6340' => 'ppa', 'Pp3c23_13420' => 'ppa', 'Pp3c24_2740' => 'ppa', 'Pp3c25_860' => 'ppa', 'Pp3c8_21750' => 'ppa', 'Prupe.1G273000' => 'ppe', 'Prupe.1G273700' => 'ppe', 'Prupe.1G274100' => 'ppe', 'Prupe.2G023300' => 'ppe', 'Prupe.4G048000' => 'ppe', 'Prupe.4G080400' => 'ppe', 'Prupe.4G181200' => 'ppe', 'Prupe.8G056900' => 'ppe', 'Prupe.8G168700' => 'ppe', 'Psat1g189080' => 'psa', 'Psat1g204760' => 'psa', 'Psat4g175560' => 'psa', 'Psat4g177720' => 'psa', 'Psat5g244240' => 'psa', 'Psat6g010720' => 'psa', 'Psat6g187200' => 'psa', 'Psat7g072040' => 'psa', 'PSO017G3501' => 'pso', 'PSO063G2148' => 'pso', 'PSO063G5608' => 'pso', 'PSO210G6392' => 'pso', 'PSO541G2319' => 'pso', 'PSO541G2836' => 'pso', 'PSO541G4012' => 'pso', 'PSO541G6253' => 'pso', 'PSO675G0580' => 'pso', 'PSO675G0856' => 'pso', 'PSO675G5635' => 'pso', 'PSO675G9157' => 'pso', 'PSO832G1660' => 'pso', 'PSO832G1969' => 'pso', 'QL02p007186' => 'qlo', 'QL02p033904' => 'qlo', 'QL03p064391' => 'qlo', 'QL05p040593' => 'qlo', 'QL05p058242' => 'qlo', 'QL08p021825' => 'qlo', 'QL11p004981' => 'qlo', 'RcHm_v2.0_Chr1g0318301' => 'rch', 'RcHm_v2.0_Chr4g0418501' => 'rch', 'RcHm_v2.0_Chr4g0439971' => 'rch', 'RcHm_v2.0_Chr5g0008541' => 'rch', 'RcHm_v2.0_Chr5g0014101' => 'rch', 'RcHm_v2.0_Chr5g0014131' => 'rch', 'RcHm_v2.0_Chr5g0033621' => 'rch', 'RcHm_v2.0_Chr6g0272041' => 'rch', 'RcHm_v2.0_Chr6g0278831' => 'rch', 'Rhsim02G0130400' => 'rsi', 'Rhsim02G0171100' => 'rsi', 'Rhsim05G0053000' => 'rsi', 'Rhsim05G0053100' => 'rsi', 'Rhsim06G0096500' => 'rsi', 'Rhsim06G0096600' => 'rsi', 'Rhsim06G0199100' => 'rsi', 'Rhsim12G0062300' => 'rsi', 'Rhsim12G0062800' => 'rsi', 'Sabra02G0118600' => 'sbr', 'Sabra04G0027300' => 'sbr', 'Sabra04G0119500' => 'sbr', 'Sabra08G0112500' => 'sbr', 'Sabra11G0036800' => 'sbr', 'Sabra11G0103800' => 'sbr', 'Sabra13G0096300' => 'sbr', 'Sabra16G0262300' => 'sbr', 'Sabra18G0091700' => 'sbr', 'Sabra19G0095400' => 'sbr', 'SalBow6G3080' => 'sbo', 'SalBow7G1157' => 'sbo', 'SalBow7G2123' => 'sbo', 'SalBow7G2285' => 'sbo', 'SalBow7G3537' => 'sbo', 'SalBow8G2947' => 'sbo', 'SalBow8G4463' => 'sbo', 'SalBow8G5466' => 'sbo', 'Sc01g0001750' => 'sci', 'Sc02g0006640' => 'sci', 'Sc02g0006670' => 'sci', 'Sc04g0008220' => 'sci', 'Sc05g0006190' => 'sci', 'Sc08g0002760' => 'sci', 'Sc17g0006170' => 'sci', 'Sc22g0002050' => 'sci', 'Sc23g0001190' => 'sci', 'Sc24g0000980' => 'sci', 'Sed0006245' => 'sed', 'Sed0007543' => 'sed', 'Sed0009411' => 'sed', 'Sed0010765' => 'sed', 'Sed0012944' => 'sed', 'Sed0014682' => 'sed', 'Sed0016174' => 'sed', 'Sed0016796' => 'sed', 'Sed0020317' => 'sed', 'Sed0021467' => 'sed', 'SEGI_01316' => 'sgi', 'SEGI_03374' => 'sgi', 'SEGI_16265' => 'sgi', 'SEGI_18569' => 'sgi', 'SEGI_20351' => 'sgi', 'SEGI_26395' => 'sgi', 'SEGI_29469' => 'sgi', 'SEGI_34771' => 'sgi', 'SEGI_36769' => 'sgi', 'SEGI_37139' => 'sgi', 'SGA_v2.0_scaffold100G29687' => 'sas', 'SGA_v2.0_scaffold118G32472' => 'sas', 'SGA_v2.0_scaffold14G07051' => 'sas', 'SGA_v2.0_scaffold183G39845' => 'sas', 'SGA_v2.0_scaffold1G00174' => 'sas', 'SGA_v2.0_scaffold22G09714' => 'sas', 'SGA_v2.0_scaffold333G48992' => 'sas', 'SGA_v2.0_scaffold46G17491' => 'sas', 'SGA_v2.0_scaffold49G18294' => 'sas', 'SGA_v2.0_scaffold63G21658' => 'sas', 'SHI01741' => 'shi', 'SHI05771' => 'shi', 'SHI18077' => 'shi', 'SHI20525' => 'shi', 'SHI20527' => 'shi', 'SHI20528' => 'shi', 'SMO172G0185' => 'smo', 'SMO198G0020' => 'smo', 'SMO351G0006' => 'smo', 'SMO356G0118' => 'smo', 'SMO358G0296' => 'smo', 'SMO367G0079' => 'smo', 'SMO367G1277' => 'smo', 'Solyc01g014220.3' => 'sly', 'Solyc01g111770.2' => 'sly', 'Solyc02g078180.3' => 'sly', 'Solyc03g006430.3' => 'sly', 'Solyc03g006456.1' => 'sly', 'Solyc03g079860.2' => 'sly', 'Solyc04g079770.3' => 'sly', 'Solyc05g007430.4' => 'sly', 'Solyc07g063150.3' => 'sly', 'Solyc08g016620.3' => 'sly', 'Solyc09g057590.3' => 'sly', 'Solyc09g057600.1' => 'sly', 'Solyc10g009050.3' => 'sly', 'Solyc11g017420.2' => 'sly', 'Sopen01g053810' => 'spe', 'Sopen02g023040' => 'spe', 'Sopen03g002440' => 'spe', 'Sopen04g033350' => 'spe', 'Sopen05g003310' => 'spe', 'Sopen07g004050' => 'spe', 'Sopen07g031340' => 'spe', 'Sopen08g006990' => 'spe', 'Sopen10g004830' => 'spe', 'Sopen11g009370' => 'spe', 'Sp1g24450' => 'spa', 'Sp1g29670' => 'spa', 'Sp1g39600' => 'spa', 'Sp2g11080' => 'spa', 'Sp2g13970' => 'spa', 'Sp4g16130' => 'spa', 'Sp6g13080' => 'spa', 'Sp7g37270' => 'spa', 'TAR371G0065' => 'tar', 'TAR376G0340' => 'tar', 'TAR376G0435' => 'tar', 'TAR381G0002' => 'tar', 'TAR381G1236' => 'tar', 'TAR624G0055' => 'tar', 'TAR624G0324' => 'tar', 'TAR624G0696' => 'tar', 'TAR624G0906' => 'tar', 'TAR625G0107' => 'tar', 'TAR626G0015' => 'tar', 'TAR626G1356' => 'tar', 'TAR627G0888' => 'tar', 'TAR628G0399' => 'tar', 'TAR628G1327' => 'tar', 'TAR629G2831' => 'tar', 'TAR629G2874' => 'tar', 'TAR633G1432' => 'tar', 'TAR633G2771' => 'tar', 'THA.LOC104803394' => 'tha', 'THA.LOC104805153' => 'tha', 'THA.LOC104806784' => 'tha', 'THA.LOC104810473' => 'tha', 'THA.LOC104813100' => 'tha', 'THA.LOC104814215' => 'tha', 'THA.LOC104815554' => 'tha', 'THA.LOC104820544' => 'tha', 'THA.LOC104824754' => 'tha', 'THA.LOC104827717' => 'tha', 'Thecc.02G031400' => 'tca', 'Thecc.02G055900' => 'tca', 'Thecc.02G350800' => 'tca', 'Thecc.06G150900' => 'tca', 'Thecc.06G186600' => 'tca', 'Thecc.07G089600' => 'tca', 'Thecc.08G020400' => 'tca', 'Thecc.08G182100' => 'tca', 'Thhalv10000873m.g' => 'esa', 'Thhalv10004185m.g' => 'esa', 'Thhalv10006981m.g' => 'esa', 'Thhalv10007204m.g' => 'esa', 'Thhalv10011374m.g' => 'esa', 'Thhalv10013482m.g' => 'esa', 'Thhalv10017801m.g' => 'esa', 'Thhalv10024983m.g' => 'esa', 'TPR.G12072' => 'tpr', 'TPR.G15769' => 'tpr', 'TPR.G16504' => 'tpr', 'TPR.G16506' => 'tpr', 'TPR.G24345' => 'tpr', 'TPR.G26666' => 'tpr', 'TPR.G27320' => 'tpr', 'TPR.G31819' => 'tpr', 'TPR.G38879' => 'tpr', 'TPR.G39015' => 'tpr', 'TPR.G8819' => 'tpr', 'TWI09G0924' => 'twi', 'TWI12G0811' => 'twi', 'TWI12G1294' => 'twi', 'TWI31G0150' => 'twi', 'TWI36G1262' => 'twi', 'TWI38G1287' => 'twi', 'TWI38G1633' => 'twi', 'TWI38G1982' => 'twi', 'TWI39G0116' => 'twi', 'TWI60G1011' => 'twi', 'TWI63G0171' => 'twi', 'TWI73G0839' => 'twi', 'TWI79G1511' => 'twi', 'unitig_0.g915' => 'ugi', 'unitig_0.g916' => 'ugi', 'unitig_21.g20219' => 'ugi', 'unitig_21.g20416' => 'ugi', 'unitig_578.g16132' => 'ugi', 'unitig_578.g16718' => 'ugi', 'unitig_62.g23481' => 'ugi', 'unitig_744.g24535' => 'ugi', 'unitig_749.g13525' => 'ugi', 'vmacro01248' => 'vma', 'vmacro02290' => 'vma', 'vmacro10946' => 'vma', 'vmacro11865' => 'vma', 'vmacro12493' => 'vma', 'vmacro17322' => 'vma', 'vmacro21599' => 'vma', 'vmacro23041' => 'vma', 'VMungo0251G0004' => 'vmu', 'VMungo0251G2639' => 'vmu', 'VMungo0251G2967' => 'vmu', 'VMungo0540G0864' => 'vmu', 'VMungo0540G1569' => 'vmu', 'VMungo0647G0317' => 'vmu', 'VMungo0720G1373' => 'vmu', 'VMungo0720G1508' => 'vmu', 'VMungo1080G0485' => 'vmu', 'VMungo1215G3177' => 'vmu', 'Zm00001eb112600' => 'zma', 'Zm00001eb120220' => 'zma', 'Zm00001eb153240' => 'zma', 'Zm00001eb168880' => 'zma', 'Zm00001eb213920' => 'zma', 'Zm00001eb228280' => 'zma', 'Zm00001eb254580' => 'zma', 'Zm00001eb272180' => 'zma', 'Zm00001eb293190' => 'zma', 'Zm00001eb322930' => 'zma', 'Zm00001eb353360' => 'zma', 'Zm00001eb353390' => 'zma', 'Zm00001eb353430' => 'zma', 'Zm00001eb353440' => 'zma', 'Zm00001eb353780' => 'zma' ), 'gf_id' => 'HOM05D000499', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000499' ), 'data_identifier' => 'HOM05D000499', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000499', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1066', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p29780' => 'bna', 'A02p33180' => 'bna', 'A03p16470' => 'bna', 'A03p66010' => 'bna', 'A04p25970' => 'bna', 'A06p01270' => 'bna', 'A06p46080' => 'bna', 'A07p11400' => 'bna', 'A08p01840' => 'bna', 'A08p08230' => 'bna', 'A08p25740' => 'bna', 'A09p32070' => 'bna', 'A09p37830' => 'bna', 'A09p42840' => 'bna', 'A09p42850' => 'bna', 'Aa31LG10G2060' => 'aar', 'Aa31LG2G7410' => 'aar', 'Aa31LG6G10200' => 'aar', 'Aa31LG6G16680' => 'aar', 'Aa31LG6G8470' => 'aar', 'Aa31LG9G12730' => 'aar', 'Aa31LG9G13680' => 'aar', 'Aa31LG9G14920' => 'aar', 'Aa31LG9G6650' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4977' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5467' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3254' => 'aag', 'Actinidia02578' => 'ach', 'Actinidia07693' => 'ach', 'Actinidia08413' => 'ach', 'Actinidia08414' => 'ach', 'Actinidia15289' => 'ach', 'Actinidia19871' => 'ach', 'Actinidia21475' => 'ach', 'Actinidia22576' => 'ach', 'Actinidia28327' => 'ach', 'Actinidia32491' => 'ach', 'Actinidia39463' => 'ach', 'Actinidia39571' => 'ach', 'Ah.01g013750' => 'amhyb', 'Ah.01g023210' => 'amhyb', 'Ah.04g164850' => 'amhyb', 'Ah.05g178060' => 'amhyb', 'Ah.07g204270' => 'amhyb', 'Ah.07g208480' => 'amhyb', 'Ah.09g237410' => 'amhyb', 'Ah.14g089460' => 'amhyb', 'AL1G41790' => 'aly', 'AL1G49050' => 'aly', 'AL1G53810' => 'aly', 'AL1G61400' => 'aly', 'AL4G18580' => 'aly', 'AL5G12510' => 'aly', 'AL5G12540' => 'aly', 'AL6G43230' => 'aly', 'AL7G10370' => 'aly', 'AL7G19250' => 'aly', 'AL8G12240' => 'aly', 'AL8G18540' => 'aly', 'Aqoxy1G02409' => 'aox', 'Aqoxy2G03993' => 'aox', 'Aqoxy3G03357' => 'aox', 'Aqoxy4G00785' => 'aox', 'Aqoxy5G02598' => 'aox', 'Aqoxy6G00132' => 'aox', 'Aqoxy7G01776' => 'aox', 'Aqoxy7G02316' => 'aox', 'Aqoxy7G03973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.12AFKW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B8730' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27IQR1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3F75VG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3RE0GA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41TCQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.527VTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FIR39' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5W8UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DA38EV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ63HS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H1I32C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HC27T5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4M8AP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7N3CZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9UVDZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LS1NQA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT1D4B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SKC4TM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCFV76' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF9Q1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQWD9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1ZM88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WE07RT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YCK7VH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJE6Q6' => 'arhy', 'AT1G28240' => 'ath', 'AT1G34550' => 'ath', 'AT1G53040' => 'ath', 'AT2G02910' => 'ath', 'AT4G09630' => 'ath', 'AT4G38500' => 'ath', 'AT5G42660' => 'ath', 'AT5G46220' => 'ath', 'ATR0152G026' => 'atr', 'ATR0564G343' => 'atr', 'ATR0706G151' => 'atr', 'ATR0733G207' => 'atr', 'ATR0751G234' => 'atr', 'ATR0807G048' => 'atr', 'ATR1091G084' => 'atr', 'Atru.chr10.1229' => 'acertr', 'Atru.chr10.1230' => 'acertr', 'Atru.chr10.1874' => 'acertr', 'Atru.chr11.1808' => 'acertr', 'Atru.chr13.1795' => 'acertr', 'Atru.chr13.570' => 'acertr', 'Atru.chr2.2608' => 'acertr', 'Atru.chr2.2609' => 'acertr', 'Atru.chr5.3428' => 'acertr', 'Atru.chr8.1171' => 'acertr', 'AUR62004651' => 'cqu', 'AUR62008675' => 'cqu', 'AUR62010014' => 'cqu', 'AUR62013004' => 'cqu', 'AUR62014825' => 'cqu', 'AUR62015015' => 'cqu', 'AUR62015151' => 'cqu', 'AUR62017020' => 'cqu', 'AUR62019422' => 'cqu', 'AUR62023570' => 'cqu', 'AUR62025571' => 'cqu', 'AUR62029098' => 'cqu', 'AUR62033863' => 'cqu', 'AUR62034296' => 'cqu', 'AUR62040075' => 'cqu', 'BcaB02g07334' => 'bca', 'BcaB02g10575' => 'bca', 'BcaB03g12119' => 'bca', 'BcaB03g12120' => 'bca', 'BcaB03g13945' => 'bca', 'BcaB04g17123' => 'bca', 'BcaB04g17867' => 'bca', 'BcaB04g19839' => 'bca', 'BcaB07g30317' => 'bca', 'BcaB07g32432' => 'bca', 'BcaB07g33362' => 'bca', 'BcaB08g36611' => 'bca', 'BcaC01g00028' => 'bca', 'BcaC01g01356' => 'bca', 'BcaC01g02034' => 'bca', 'BcaC01g06051' => 'bca', 'BcaC03g16839' => 'bca', 'BcaC03g17176' => 'bca', 'BcaC05g26829' => 'bca', 'BcaC06g31490' => 'bca', 'BcaC06g35344' => 'bca', 'BcaC06g36570' => 'bca', 'BcaC07g37537' => 'bca', 'BcaC08g43491' => 'bca', 'BcaC08g43773' => 'bca', 'BcaNung00234' => 'bca', 'BcaNung01982' => 'bca', 'BcaNung03707' => 'bca', 'BcaNung06454' => 'bca', 'BolC2t10762H' => 'bol', 'BolC2t11191H' => 'bol', 'BolC3t14322H' => 'bol', 'BolC3t19747H' => 'bol', 'BolC3t21425H' => 'bol', 'BolC4t27800H' => 'bol', 'BolC5t31423H' => 'bol', 'BolC6t35951H' => 'bol', 'BolC6t36282H' => 'bol', 'BolC7t40678H' => 'bol', 'BolC7t40679H' => 'bol', 'BolC7t42222H' => 'bol', 'BolC7t43492H' => 'bol', 'BolC7t46785H' => 'bol', 'BolC8t47853H' => 'bol', 'BolC9t56805H' => 'bol', 'BraA02t08000Z' => 'bra', 'BraA02t08341Z' => 'bra', 'BraA03t10936Z' => 'bra', 'BraA03t15657Z' => 'bra', 'BraA04t18100Z' => 'bra', 'BraA05t20523Z' => 'bra', 'BraA06t23353Z' => 'bra', 'BraA06t27473Z' => 'bra', 'BraA06t27769Z' => 'bra', 'BraA07t28928Z' => 'bra', 'BraA08t32236Z' => 'bra', 'BraA08t32841Z' => 'bra', 'BraA08t34524Z' => 'bra', 'BraA09t38742Z' => 'bra', 'BraA09t39295Z' => 'bra', 'C02p47180' => 'bna', 'C02p50990' => 'bna', 'C03p19360' => 'bna', 'C03p74950' => 'bna', 'C03p91000' => 'bna', 'C04p63260' => 'bna', 'C05p27050' => 'bna', 'C06p08750' => 'bna', 'C06p11490' => 'bna', 'C07p02820' => 'bna', 'C07p17180' => 'bna', 'C07p29440' => 'bna', 'C07p63730' => 'bna', 'C09p39260' => 'bna', 'CAN.G1164.34' => 'can', 'CAN.G1164.39' => 'can', 'CAN.G1530.3' => 'can', 'CAN.G162.61' => 'can', 'CAN.G176.6' => 'can', 'CAN.G289.49' => 'can', 'CAN.G370.21' => 'can', 'CAN.G370.22' => 'can', 'CAN.G371.117' => 'can', 'CAN.G58.37' => 'can', 'CAN.G588.98' => 'can', 'CANSAT21G2266' => 'cansat', 'CANSAT25G2799' => 'cansat', 'CANSAT35G0862' => 'cansat', 'CANSAT35G1704' => 'cansat', 'CANSAT35G1760' => 'cansat', 'CANSAT56G3971' => 'cansat', 'CANSAT56G4116' => 'cansat', 'CANSAT80G1259' => 'cansat', 'CARHR027730' => 'chi', 'CARHR033880' => 'chi', 'CARHR043270' => 'chi', 'CARHR145330' => 'chi', 'CARHR145340' => 'chi', 'CARHR175570' => 'chi', 'CARHR181570' => 'chi', 'CARHR258470' => 'chi', 'CARHR260490' => 'chi', 'CARHR294220' => 'chi', 'Carub.0001s2668' => 'cru', 'Carub.0001s3257' => 'cru', 'Carub.0001s4220' => 'cru', 'Carub.0005s0179' => 'cru', 'Carub.0006s2807' => 'cru', 'Carub.0007s0039' => 'cru', 'Carub.0008s0169' => 'cru', 'Carub.0008s0636' => 'cru', 'Ca_00338_v3' => 'car', 'Ca_00542_v3' => 'car', 'Ca_01844_v3' => 'car', 'Ca_10611_v3' => 'car', 'Ca_13326_v3' => 'car', 'Ca_17944_v3' => 'car', 'Ca_18546_v3' => 'car', 'Ca_24219_v3' => 'car', 'Ca_29972_v3' => 'car', 'CBR_g3681' => 'cbr', 'CBR_g40021' => 'cbr', 'Cc01_g08140' => 'ccan', 'Cc02_g13410' => 'ccan', 'Cc02_g37480' => 'ccan', 'Cc05_g12030' => 'ccan', 'Cc09_g03370' => 'ccan', 'Cc09_g10300' => 'ccan', 'Cc10_g03530' => 'ccan', 'Cc10_g11380' => 'ccan', 'CDE01G0176' => 'cde', 'CDE02G0675' => 'cde', 'CDE02G0942' => 'cde', 'CDE02G1153' => 'cde', 'CDE02G4177' => 'cde', 'CDE04G2117' => 'cde', 'CDE04G2736' => 'cde', 'CDE08G1161' => 'cde', 'CDE09G1238' => 'cde', 'Cfa000467' => 'cfa', 'Cfa000947' => 'cfa', 'Cfa004969' => 'cfa', 'Cfa005284' => 'cfa', 'Cfa008993' => 'cfa', 'Cfa018187' => 'cfa', 'Cfa018454' => 'cfa', 'Cfa020585' => 'cfa', 'Ciclev10000424m.g' => 'ccl', 'Ciclev10003605m.g' => 'ccl', 'Ciclev10007828m.g' => 'ccl', 'Ciclev10014620m.g' => 'ccl', 'Ciclev10015169m.g' => 'ccl', 'Ciclev10018291m.g' => 'ccl', 'Ciclev10028256m.g' => 'ccl', 'Ciclev10033822m.g' => 'ccl', 'CiPaw.05G060300' => 'cil', 'CiPaw.05G085000' => 'cil', 'CiPaw.06G083700' => 'cil', 'CiPaw.06G120300' => 'cil', 'CiPaw.09G060500' => 'cil', 'CiPaw.09G123800' => 'cil', 'CiPaw.11G169700' => 'cil', 'CiPaw.12G118300' => 'cil', 'CiPaw.15G071000' => 'cil', 'CiPaw.15G081900' => 'cil', 'ClCG01G024610' => 'cla', 'ClCG03G006070' => 'cla', 'ClCG05G019250' => 'cla', 'ClCG09G009500' => 'cla', 'ClCG11G008200' => 'cla', 'ClCG11G018080' => 'cla', 'COL.COLO4_17373' => 'col', 'COL.COLO4_22994' => 'col', 'COL.COLO4_26389' => 'col', 'COL.COLO4_27170' => 'col', 'COL.COLO4_31074' => 'col', 'COL.COLO4_31465' => 'col', 'COL.COLO4_36438' => 'col', 'COL.COLO4_36439' => 'col', 'Cpa.g.c38781' => 'cpa', 'Cpa.g.sc128.12' => 'cpa', 'Cpa.g.sc166.7' => 'cpa', 'Cpa.g.sc166.8' => 'cpa', 'Cpa.g.sc20.111' => 'cpa', 'Cpa.g.sc27.31' => 'cpa', 'Cpa.g.sc64.36' => 'cpa', 'Cpa.g.sc64.37' => 'cpa', 'Cpa.g.sc66.49' => 'cpa', 'Cpa.g.sc80.64' => 'cpa', 'CsaV3_1G012320' => 'csa', 'CsaV3_2G008480' => 'csa', 'CsaV3_2G033450' => 'csa', 'CsaV3_3G044830' => 'csa', 'CsaV3_4G033710' => 'csa', 'CsaV3_6G051730' => 'csa', 'CsaV3_7G025350' => 'csa', 'CSS0001067' => 'camsi', 'CSS0005996' => 'camsi', 'CSS0006590' => 'camsi', 'CSS0009673' => 'camsi', 'CSS0010201' => 'camsi', 'CSS0010549' => 'camsi', 'CSS0011364' => 'camsi', 'CSS0014473' => 'camsi', 'CSS0014961' => 'camsi', 'CSS0020191' => 'camsi', 'CSS0021165' => 'camsi', 'CSS0022306' => 'camsi', 'CSS0030591' => 'camsi', 'CSS0030696' => 'camsi', 'CSS0032653' => 'camsi', 'CSS0037487' => 'camsi', 'CSS0041102' => 'camsi', 'CSS0041261' => 'camsi', 'CSS0046246' => 'camsi', 'CSS0049256' => 'camsi', 'DCAR_004075' => 'dca', 'DCAR_011538' => 'dca', 'DCAR_019553' => 'dca', 'DCAR_020952' => 'dca', 'DCAR_021739' => 'dca', 'DCAR_027407' => 'dca', 'DCAR_027913' => 'dca', 'DCAR_028066' => 'dca', 'Dinv05899' => 'din', 'Dinv07563' => 'din', 'Dinv08010' => 'din', 'Dinv14125' => 'din', 'Dinv20172' => 'din', 'Dinv30743' => 'din', 'Dinv31229' => 'din', 'Dinv34162' => 'din', 'Dinv36028' => 'din', 'Dinv39368' => 'din', 'Dinv40565' => 'din', 'Dinv41706' => 'din', 'Duzib052G0089' => 'dzi', 'Duzib116G0641' => 'dzi', 'Duzib132G0069' => 'dzi', 'Duzib132G1219' => 'dzi', 'Duzib147G0278' => 'dzi', 'Duzib160G0480' => 'dzi', 'Duzib170G0661' => 'dzi', 'Duzib177G0591' => 'dzi', 'Duzib187G1353' => 'dzi', 'Duzib192G0858' => 'dzi', 'Duzib192G0883' => 'dzi', 'Duzib213G0506' => 'dzi', 'Duzib235G0289' => 'dzi', 'Duzib251G0422' => 'dzi', 'ECA232G3898' => 'eca', 'ECA233G5950' => 'eca', 'ECA234G1699' => 'eca', 'ECA234G2421' => 'eca', 'ECA236G0426' => 'eca', 'ECA236G4331' => 'eca', 'ECA248G2573' => 'eca', 'EL10Ac1g00077' => 'bvu', 'EL10Ac1g01746' => 'bvu', 'EL10Ac2g03464' => 'bvu', 'EL10Ac4g08176' => 'bvu', 'EL10Ac7g17521' => 'bvu', 'EL10Ac8g20386' => 'bvu', 'EL10Ac9g21343' => 'bvu', 'EL10Ac9g22688' => 'bvu', 'Eucgr.B03434' => 'egr', 'Eucgr.D00618' => 'egr', 'Eucgr.E02395' => 'egr', 'Eucgr.F01129' => 'egr', 'Eucgr.F02622' => 'egr', 'Eucgr.F04207' => 'egr', 'FAN01G0570' => 'fan', 'FAN03G3351' => 'fan', 'FAN06G3702' => 'fan', 'FAN07G2149' => 'fan', 'FAN10G3758' => 'fan', 'FAN11G1170' => 'fan', 'FAN11G2050' => 'fan', 'FAN11G2724' => 'fan', 'FAN12G1700' => 'fan', 'FAN12G2028' => 'fan', 'FAN15G1160' => 'fan', 'FAN15G3063' => 'fan', 'FAN16G2540' => 'fan', 'FAN16G3077' => 'fan', 'FAN16G3624' => 'fan', 'FAN17G0221' => 'fan', 'FAN20G2492' => 'fan', 'FAN20G2905' => 'fan', 'FAN21G0548' => 'fan', 'FAN21G1300' => 'fan', 'FAN22G0077' => 'fan', 'FAN22G1315' => 'fan', 'FAN24G1280' => 'fan', 'FAN24G1445' => 'fan', 'FAN24G3527' => 'fan', 'FAN25G0464' => 'fan', 'FAN25G2885' => 'fan', 'FAN25G3270' => 'fan', 'FAN27G1101' => 'fan', 'FAN27G2846' => 'fan', 'FAN27G3524' => 'fan', 'FvH4_2g11770' => 'fve', 'FvH4_2g15630' => 'fve', 'FvH4_3g05570' => 'fve', 'FvH4_3g09110' => 'fve', 'FvH4_3g19940' => 'fve', 'FvH4_4g04821' => 'fve', 'FvH4_4g31480' => 'fve', 'FvH4_7g01740' => 'fve', 'Glyma.05G130400' => 'gma', 'Glyma.05G156400' => 'gma', 'Glyma.07G197000' => 'gma', 'Glyma.08G085151' => 'gma', 'Glyma.08G114500' => 'gma', 'Glyma.08G300400' => 'gma', 'Glyma.10G215800' => 'gma', 'Glyma.12G224400' => 'gma', 'Glyma.13G179300' => 'gma', 'Glyma.13G218151' => 'gma', 'Glyma.13G238800' => 'gma', 'Glyma.13G276900' => 'gma', 'Glyma.14G078200' => 'gma', 'Glyma.15G074500' => 'gma', 'Glyma.15G094100' => 'gma', 'Glyma.17G247200' => 'gma', 'Glyma.18G120100' => 'gma', 'Glyma.20G176000' => 'gma', 'Gohir.A01G063600' => 'ghi', 'Gohir.A01G170301' => 'ghi', 'Gohir.A02G060500' => 'ghi', 'Gohir.A05G133850' => 'ghi', 'Gohir.A05G161400' => 'ghi', 'Gohir.A06G012900' => 'ghi', 'Gohir.A06G035901' => 'ghi', 'Gohir.A06G127100' => 'ghi', 'Gohir.A06G210500' => 'ghi', 'Gohir.A08G008650' => 'ghi', 'Gohir.A09G072700' => 'ghi', 'Gohir.A09G088301' => 'ghi', 'Gohir.A10G040600' => 'ghi', 'Gohir.A12G036300' => 'ghi', 'Gohir.A12G143350' => 'ghi', 'Gohir.A12G165500' => 'ghi', 'Gohir.A13G145700' => 'ghi', 'Gohir.D01G050000' => 'ghi', 'Gohir.D01G051366' => 'ghi', 'Gohir.D01G161350' => 'ghi', 'Gohir.D02G065900' => 'ghi', 'Gohir.D05G164200' => 'ghi', 'Gohir.D05G355500' => 'ghi', 'Gohir.D06G010400' => 'ghi', 'Gohir.D06G111250' => 'ghi', 'Gohir.D06G132000' => 'ghi', 'Gohir.D06G210500' => 'ghi', 'Gohir.D07G165675' => 'ghi', 'Gohir.D08G062240' => 'ghi', 'Gohir.D08G086101' => 'ghi', 'Gohir.D08G138060' => 'ghi', 'Gohir.D09G072300' => 'ghi', 'Gohir.D10G041400' => 'ghi', 'Gohir.D11G191020' => 'ghi', 'Gohir.D11G212066' => 'ghi', 'Gohir.D12G036300' => 'ghi', 'Gohir.D12G168600' => 'ghi', 'Gohir.D13G150600' => 'ghi', 'Gorai.001G057300' => 'gra', 'Gorai.002G069900' => 'gra', 'Gorai.002G200000' => 'gra', 'Gorai.003G067600' => 'gra', 'Gorai.005G074800' => 'gra', 'Gorai.006G087300' => 'gra', 'Gorai.008G037500' => 'gra', 'Gorai.008G181400' => 'gra', 'Gorai.009G169400' => 'gra', 'Gorai.009G387900' => 'gra', 'Gorai.010G013300' => 'gra', 'Gorai.010G153800' => 'gra', 'Gorai.010G255800' => 'gra', 'Gorai.011G043700' => 'gra', 'Gorai.011G198900' => 'gra', 'Gorai.013G168400' => 'gra', 'GSVIVG01005212001' => 'vvi', 'GSVIVG01006163001' => 'vvi', 'GSVIVG01009625001' => 'vvi', 'GSVIVG01014338001' => 'vvi', 'GSVIVG01020005001' => 'vvi', 'GSVIVG01021450001' => 'vvi', 'GSVIVG01023975001' => 'vvi', 'GSVIVG01034490001' => 'vvi', 'HanXRQChr04g0112071' => 'han', 'HanXRQChr05g0131151' => 'han', 'HanXRQChr09g0262371' => 'han', 'HanXRQChr09g0268401' => 'han', 'HanXRQChr10g0279241' => 'han', 'HanXRQChr10g0297961' => 'han', 'HanXRQChr11g0326231' => 'han', 'HanXRQChr11g0328471' => 'han', 'HanXRQChr16g0507941' => 'han', 'HanXRQChr17g0560211' => 'han', 'Haze_02108' => 'cav', 'Haze_02428' => 'cav', 'Haze_05593' => 'cav', 'Haze_06448' => 'cav', 'Haze_09427' => 'cav', 'Haze_12022' => 'cav', 'Haze_17612' => 'cav', 'Haze_17928' => 'cav', 'Hma1.2p1_0032F.1_g019250' => 'hma', 'Hma1.2p1_0163F.1_g072690' => 'hma', 'Hma1.2p1_0265F.1_g106710' => 'hma', 'Hma1.2p1_0286F.1_g113970' => 'hma', 'Hma1.2p1_0363F.1_g136640' => 'hma', 'Hma1.2p1_0584F.1_g183470' => 'hma', 'Hma1.2p1_0885F.1_g232570' => 'hma', 'HPP92_006022' => 'vpl', 'HPP92_007320' => 'vpl', 'HPP92_011521' => 'vpl', 'HPP92_019387' => 'vpl', 'HPP92_024038' => 'vpl', 'Hund05891' => 'sun', 'Hund06450' => 'sun', 'Hund12053' => 'sun', 'Hund16800' => 'sun', 'Hund21222' => 'sun', 'Hund22896' => 'sun', 'Hund23746' => 'sun', 'Hund27083' => 'sun', 'Lalb_Chr02g0141831' => 'lal', 'Lalb_Chr02g0141841' => 'lal', 'Lalb_Chr05g0220411' => 'lal', 'Lalb_Chr06g0162081' => 'lal', 'Lalb_Chr09g0327651' => 'lal', 'Lalb_Chr13g0295051' => 'lal', 'Lalb_Chr15g0086801' => 'lal', 'Lalb_Chr16g0383781' => 'lal', 'Lalb_Chr16g0383791' => 'lal', 'Lalb_Chr18g0055441' => 'lal', 'Lalb_Chr18g0059611' => 'lal', 'Lalb_Chr20g0109661' => 'lal', 'Lalb_Chr20g0109831' => 'lal', 'Lalb_Chr20g0121871' => 'lal', 'Lalb_Chr22g0355361' => 'lal', 'Lalb_Chr25g0286371' => 'lal', 'Lj1A1187G43' => 'lonja', 'Lj1A1205T50' => 'lonja', 'Lj1A800G33' => 'lonja', 'Lj1C1187T7' => 'lonja', 'Lj1C843T11' => 'lonja', 'Lj1g0010940' => 'lja', 'Lj2A288T69' => 'lonja', 'Lj3g0024276' => 'lja', 'Lj4A47T76' => 'lonja', 'Lj4g0005805' => 'lja', 'Lj4g0006097' => 'lja', 'Lj4g0008528' => 'lja', 'Lj4g0024907' => 'lja', 'Lj5g0012472' => 'lja', 'Lj5g0018648' => 'lja', 'Lj6C789G1' => 'lonja', 'Lj6g0004000' => 'lja', 'Lj7A292G67' => 'lonja', 'Lj7A292T64' => 'lonja', 'Lj9A400T58' => 'lonja', 'Lsat_1_v5_gn_1_126181' => 'lsa', 'Lsat_1_v5_gn_4_123041' => 'lsa', 'Lsat_1_v5_gn_4_133620' => 'lsa', 'Lsat_1_v5_gn_4_53221' => 'lsa', 'Lsat_1_v5_gn_4_71961' => 'lsa', 'Lsat_1_v5_gn_7_105241' => 'lsa', 'Lsat_1_v5_gn_7_21361' => 'lsa', 'Lsat_1_v5_gn_7_28860' => 'lsa', 'Lsat_1_v5_gn_7_31260' => 'lsa', 'Lsat_1_v5_gn_8_52801' => 'lsa', 'Manes.02G191400' => 'mes', 'Manes.03G110100' => 'mes', 'Manes.04G071100' => 'mes', 'Manes.05G100500' => 'mes', 'Manes.05G164700' => 'mes', 'Manes.15G087000' => 'mes', 'Manes.15G121500' => 'mes', 'Manes.16G028300' => 'mes', 'Manes.17G046100' => 'mes', 'Manes.17G069800' => 'mes', 'Manes.18G100500' => 'mes', 'Mapoly0002s0109' => 'mpo', 'Mapoly0024s0007' => 'mpo', 'Mapoly0089s0032' => 'mpo', 'MBI04_g42241_MAGBIO' => 'mbi', 'MBI05_g11988_MAGBIO' => 'mbi', 'MBI05_g35452_MAGBIO' => 'mbi', 'MBI07_g30179_MAGBIO' => 'mbi', 'MBI07_g35859_MAGBIO' => 'mbi', 'MBI07_g35860_MAGBIO' => 'mbi', 'MBI07_g37166_MAGBIO' => 'mbi', 'MBI08_g18172_MAGBIO' => 'mbi', 'MBI09_g08441_MAGBIO' => 'mbi', 'MBI13_g01676_MAGBIO' => 'mbi', 'MBI14_g42955_MAGBIO' => 'mbi', 'MBI16_g13161_MAGBIO' => 'mbi', 'MBI17_g27204_MAGBIO' => 'mbi', 'MBI19_g21595_MAGBIO' => 'mbi', 'MD00G1148400' => 'mdo', 'MD02G1301200' => 'mdo', 'MD03G1227800' => 'mdo', 'MD05G1041100' => 'mdo', 'MD05G1124800' => 'mdo', 'MD05G1284000' => 'mdo', 'MD05G1338800' => 'mdo', 'MD05G1338900' => 'mdo', 'MD07G1022800' => 'mdo', 'MD10G1047500' => 'mdo', 'MD10G1127500' => 'mdo', 'MD10G1262300' => 'mdo', 'MD10G1293800' => 'mdo', 'MD16G1074300' => 'mdo', 'Medtr1g021670' => 'mtr', 'Medtr1g096320' => 'mtr', 'Medtr2g013690' => 'mtr', 'Medtr2g019450' => 'mtr', 'Medtr2g085170' => 'mtr', 'Medtr4g088785' => 'mtr', 'Medtr8g055930' => 'mtr', 'Medtr8g085850' => 'mtr', 'MELO3C002605.2' => 'cme', 'MELO3C003891.2' => 'cme', 'MELO3C004012.2' => 'cme', 'MELO3C007134.2' => 'cme', 'MELO3C008118.2' => 'cme', 'MELO3C016700.2' => 'cme', 'MELO3C024127.2' => 'cme', 'MELO3C033361.2' => 'cme', 'MELO3C033362.2' => 'cme', 'Migut.C00430' => 'egut', 'Migut.C01246' => 'egut', 'Migut.E00101' => 'egut', 'Migut.H01486' => 'egut', 'Migut.H01939' => 'egut', 'Migut.K00360' => 'egut', 'Migut.M00910' => 'egut', 'Migut.M01139' => 'egut', 'Migut.N02677' => 'egut', 'MSTRG.13252' => 'ama', 'MSTRG.14701' => 'ama', 'MSTRG.1521' => 'ama', 'MSTRG.15884' => 'ama', 'MSTRG.16242' => 'ama', 'MSTRG.22285' => 'ama', 'MSTRG.22444' => 'ama', 'MSTRG.2349' => 'ama', 'MSTRG.26308' => 'ama', 'MSTRG.28296' => 'ama', 'MSTRG.9895' => 'ama', 'Nitab4.5_0000110g0060' => 'nta', 'Nitab4.5_0000420g0130' => 'nta', 'Nitab4.5_0000422g0030' => 'nta', 'Nitab4.5_0000560g0180' => 'nta', 'Nitab4.5_0000703g0100' => 'nta', 'Nitab4.5_0000786g0200' => 'nta', 'Nitab4.5_0001336g0020' => 'nta', 'Nitab4.5_0001796g0030' => 'nta', 'Nitab4.5_0003348g0060' => 'nta', 'Nitab4.5_0003698g0040' => 'nta', 'Nitab4.5_0003942g0090' => 'nta', 'Nitab4.5_0004775g0070' => 'nta', 'Nitab4.5_0004864g0030' => 'nta', 'Nitab4.5_0005615g0020' => 'nta', 'Nitab4.5_0009288g0030' => 'nta', 'Nitab4.5_0009341g0010' => 'nta', 'Nitab4.5_0009535g0010' => 'nta', 'Nn1g03995' => 'nnu', 'Nn1g04100' => 'nnu', 'Nn1g06530' => 'nnu', 'Nn3g16404' => 'nnu', 'Nn3g17212' => 'nnu', 'Nn3g20776' => 'nnu', 'Nn3g21923' => 'nnu', 'Nn5g27737' => 'nnu', 'Nn5g29461' => 'nnu', 'Nn7g38355' => 'nnu', 'Nn8g39873' => 'nnu', 'Oeu000548.2' => 'oeu', 'Oeu004672.1' => 'oeu', 'Oeu015605.2' => 'oeu', 'Oeu016092.1' => 'oeu', 'Oeu017879.3' => 'oeu', 'Oeu024910.1' => 'oeu', 'Oeu028965.1' => 'oeu', 'Oeu031269.1' => 'oeu', 'Oeu031270.1' => 'oeu', 'Oeu032535.1' => 'oeu', 'Oeu034151.1' => 'oeu', 'Oeu034152.1' => 'oeu', 'Oeu034588.2' => 'oeu', 'Oeu050846.1' => 'oeu', 'Oeu050849.2' => 'oeu', 'Oeu051063.2' => 'oeu', 'Oeu052368.1' => 'oeu', 'Oeu052370.1' => 'oeu', 'Os01g0210400' => 'osa', 'Os01g0304300' => 'osa', 'Os01g0749100' => 'osa', 'Os02g0745800' => 'osa', 'Os03g0769050' => 'osa', 'Os05g0531500' => 'osa', 'Os06g0724300' => 'osa', 'Os11g0198100' => 'osa', 'Peaxi162Scf00069g01425' => 'pax', 'Peaxi162Scf00280g00811' => 'pax', 'Peaxi162Scf00310g00615' => 'pax', 'Peaxi162Scf00362g00542' => 'pax', 'Peaxi162Scf00461g00310' => 'pax', 'Peaxi162Scf00530g00118' => 'pax', 'Peaxi162Scf00541g00057' => 'pax', 'Peaxi162Scf00661g00017' => 'pax', 'Peaxi162Scf00926g00027' => 'pax', 'Peaxi162Scf01064g00263' => 'pax', 'Peaxi162Scf01211g00135' => 'pax', 'PGR004G2336' => 'pgr', 'PGR042G0327' => 'pgr', 'PGR042G1957' => 'pgr', 'PGR042G2003' => 'pgr', 'PGR042G3929' => 'pgr', 'PGR083G1137' => 'pgr', 'PGR083G1364' => 'pgr', 'PGSC0003DMG400003381' => 'stu', 'PGSC0003DMG400003417' => 'stu', 'PGSC0003DMG400008981' => 'stu', 'PGSC0003DMG400012417' => 'stu', 'PGSC0003DMG400012823' => 'stu', 'PGSC0003DMG400016885' => 'stu', 'PGSC0003DMG400022812' => 'stu', 'PGSC0003DMG400029726' => 'stu', 'PGSC0003DMG401009243' => 'stu', 'PGSC0003DMG401031505' => 'stu', 'PGSC0003DMG402031505' => 'stu', 'Phvul.001G017600' => 'pvu', 'Phvul.002G193500' => 'pvu', 'Phvul.002G228900' => 'pvu', 'Phvul.002G236800' => 'pvu', 'Phvul.003G049500' => 'pvu', 'Phvul.005G072000' => 'pvu', 'Phvul.006G164800' => 'pvu', 'Phvul.006G185100' => 'pvu', 'Phvul.007G090000' => 'pvu', 'Potri.001G399800' => 'ptr', 'Potri.002G149900' => 'ptr', 'Potri.004G044100' => 'ptr', 'Potri.004G177600' => 'ptr', 'Potri.009G138000' => 'ptr', 'Potri.010G094000' => 'ptr', 'Potri.011G053000' => 'ptr', 'Potri.011G119300' => 'ptr', 'Potri.013G113700' => 'ptr', 'Potri.018G107800' => 'ptr', 'Potri.019G084100' => 'ptr', 'Pp3c14_23720' => 'ppa', 'Pp3c16_6340' => 'ppa', 'Pp3c23_13420' => 'ppa', 'Pp3c24_2740' => 'ppa', 'Pp3c25_860' => 'ppa', 'Pp3c8_21750' => 'ppa', 'Prupe.1G273000' => 'ppe', 'Prupe.1G273700' => 'ppe', 'Prupe.1G274100' => 'ppe', 'Prupe.2G023300' => 'ppe', 'Prupe.4G048000' => 'ppe', 'Prupe.4G080400' => 'ppe', 'Prupe.4G181200' => 'ppe', 'Prupe.8G056900' => 'ppe', 'Prupe.8G168700' => 'ppe', 'Psat1g189080' => 'psa', 'Psat1g204760' => 'psa', 'Psat4g175560' => 'psa', 'Psat4g177720' => 'psa', 'Psat5g244240' => 'psa', 'Psat6g010720' => 'psa', 'Psat6g187200' => 'psa', 'Psat7g072040' => 'psa', 'PSO017G3501' => 'pso', 'PSO063G2148' => 'pso', 'PSO063G5608' => 'pso', 'PSO210G6392' => 'pso', 'PSO541G2319' => 'pso', 'PSO541G2836' => 'pso', 'PSO541G4012' => 'pso', 'PSO541G6253' => 'pso', 'PSO675G0580' => 'pso', 'PSO675G0856' => 'pso', 'PSO675G5635' => 'pso', 'PSO675G9157' => 'pso', 'PSO832G1660' => 'pso', 'PSO832G1969' => 'pso', 'QL02p007186' => 'qlo', 'QL02p033904' => 'qlo', 'QL03p064391' => 'qlo', 'QL05p040593' => 'qlo', 'QL05p058242' => 'qlo', 'QL08p021825' => 'qlo', 'QL11p004981' => 'qlo', 'RcHm_v2.0_Chr1g0318301' => 'rch', 'RcHm_v2.0_Chr4g0418501' => 'rch', 'RcHm_v2.0_Chr4g0439971' => 'rch', 'RcHm_v2.0_Chr5g0008541' => 'rch', 'RcHm_v2.0_Chr5g0014101' => 'rch', 'RcHm_v2.0_Chr5g0014131' => 'rch', 'RcHm_v2.0_Chr5g0033621' => 'rch', 'RcHm_v2.0_Chr6g0272041' => 'rch', 'RcHm_v2.0_Chr6g0278831' => 'rch', 'Rhsim02G0130400' => 'rsi', 'Rhsim02G0171100' => 'rsi', 'Rhsim05G0053000' => 'rsi', 'Rhsim05G0053100' => 'rsi', 'Rhsim06G0096500' => 'rsi', 'Rhsim06G0096600' => 'rsi', 'Rhsim06G0199100' => 'rsi', 'Rhsim12G0062300' => 'rsi', 'Rhsim12G0062800' => 'rsi', 'Sabra02G0118600' => 'sbr', 'Sabra04G0027300' => 'sbr', 'Sabra04G0119500' => 'sbr', 'Sabra08G0112500' => 'sbr', 'Sabra11G0036800' => 'sbr', 'Sabra11G0103800' => 'sbr', 'Sabra13G0096300' => 'sbr', 'Sabra16G0262300' => 'sbr', 'Sabra18G0091700' => 'sbr', 'Sabra19G0095400' => 'sbr', 'SalBow6G3080' => 'sbo', 'SalBow7G1157' => 'sbo', 'SalBow7G2123' => 'sbo', 'SalBow7G2285' => 'sbo', 'SalBow7G3537' => 'sbo', 'SalBow8G2947' => 'sbo', 'SalBow8G4463' => 'sbo', 'SalBow8G5466' => 'sbo', 'Sc01g0001750' => 'sci', 'Sc02g0006640' => 'sci', 'Sc02g0006670' => 'sci', 'Sc04g0008220' => 'sci', 'Sc05g0006190' => 'sci', 'Sc08g0002760' => 'sci', 'Sc17g0006170' => 'sci', 'Sc22g0002050' => 'sci', 'Sc23g0001190' => 'sci', 'Sc24g0000980' => 'sci', 'Sed0006245' => 'sed', 'Sed0007543' => 'sed', 'Sed0009411' => 'sed', 'Sed0010765' => 'sed', 'Sed0012944' => 'sed', 'Sed0014682' => 'sed', 'Sed0016174' => 'sed', 'Sed0016796' => 'sed', 'Sed0020317' => 'sed', 'Sed0021467' => 'sed', 'SEGI_01316' => 'sgi', 'SEGI_03374' => 'sgi', 'SEGI_16265' => 'sgi', 'SEGI_18569' => 'sgi', 'SEGI_20351' => 'sgi', 'SEGI_26395' => 'sgi', 'SEGI_29469' => 'sgi', 'SEGI_34771' => 'sgi', 'SEGI_36769' => 'sgi', 'SEGI_37139' => 'sgi', 'SGA_v2.0_scaffold100G29687' => 'sas', 'SGA_v2.0_scaffold118G32472' => 'sas', 'SGA_v2.0_scaffold14G07051' => 'sas', 'SGA_v2.0_scaffold183G39845' => 'sas', 'SGA_v2.0_scaffold1G00174' => 'sas', 'SGA_v2.0_scaffold22G09714' => 'sas', 'SGA_v2.0_scaffold333G48992' => 'sas', 'SGA_v2.0_scaffold46G17491' => 'sas', 'SGA_v2.0_scaffold49G18294' => 'sas', 'SGA_v2.0_scaffold63G21658' => 'sas', 'SHI01741' => 'shi', 'SHI05771' => 'shi', 'SHI18077' => 'shi', 'SHI20525' => 'shi', 'SHI20527' => 'shi', 'SHI20528' => 'shi', 'SMO172G0185' => 'smo', 'SMO198G0020' => 'smo', 'SMO351G0006' => 'smo', 'SMO356G0118' => 'smo', 'SMO358G0296' => 'smo', 'SMO367G0079' => 'smo', 'SMO367G1277' => 'smo', 'Solyc01g014220.3' => 'sly', 'Solyc01g111770.2' => 'sly', 'Solyc02g078180.3' => 'sly', 'Solyc03g006430.3' => 'sly', 'Solyc03g006456.1' => 'sly', 'Solyc03g079860.2' => 'sly', 'Solyc04g079770.3' => 'sly', 'Solyc05g007430.4' => 'sly', 'Solyc07g063150.3' => 'sly', 'Solyc08g016620.3' => 'sly', 'Solyc09g057590.3' => 'sly', 'Solyc09g057600.1' => 'sly', 'Solyc10g009050.3' => 'sly', 'Solyc11g017420.2' => 'sly', 'Sopen01g053810' => 'spe', 'Sopen02g023040' => 'spe', 'Sopen03g002440' => 'spe', 'Sopen04g033350' => 'spe', 'Sopen05g003310' => 'spe', 'Sopen07g004050' => 'spe', 'Sopen07g031340' => 'spe', 'Sopen08g006990' => 'spe', 'Sopen10g004830' => 'spe', 'Sopen11g009370' => 'spe', 'Sp1g24450' => 'spa', 'Sp1g29670' => 'spa', 'Sp1g39600' => 'spa', 'Sp2g11080' => 'spa', 'Sp2g13970' => 'spa', 'Sp4g16130' => 'spa', 'Sp6g13080' => 'spa', 'Sp7g37270' => 'spa', 'TAR371G0065' => 'tar', 'TAR376G0340' => 'tar', 'TAR376G0435' => 'tar', 'TAR381G0002' => 'tar', 'TAR381G1236' => 'tar', 'TAR624G0055' => 'tar', 'TAR624G0324' => 'tar', 'TAR624G0696' => 'tar', 'TAR624G0906' => 'tar', 'TAR625G0107' => 'tar', 'TAR626G0015' => 'tar', 'TAR626G1356' => 'tar', 'TAR627G0888' => 'tar', 'TAR628G0399' => 'tar', 'TAR628G1327' => 'tar', 'TAR629G2831' => 'tar', 'TAR629G2874' => 'tar', 'TAR633G1432' => 'tar', 'TAR633G2771' => 'tar', 'THA.LOC104803394' => 'tha', 'THA.LOC104805153' => 'tha', 'THA.LOC104806784' => 'tha', 'THA.LOC104810473' => 'tha', 'THA.LOC104813100' => 'tha', 'THA.LOC104814215' => 'tha', 'THA.LOC104815554' => 'tha', 'THA.LOC104820544' => 'tha', 'THA.LOC104824754' => 'tha', 'THA.LOC104827717' => 'tha', 'Thecc.02G031400' => 'tca', 'Thecc.02G055900' => 'tca', 'Thecc.02G350800' => 'tca', 'Thecc.06G150900' => 'tca', 'Thecc.06G186600' => 'tca', 'Thecc.07G089600' => 'tca', 'Thecc.08G020400' => 'tca', 'Thecc.08G182100' => 'tca', 'Thhalv10000873m.g' => 'esa', 'Thhalv10004185m.g' => 'esa', 'Thhalv10006981m.g' => 'esa', 'Thhalv10007204m.g' => 'esa', 'Thhalv10011374m.g' => 'esa', 'Thhalv10013482m.g' => 'esa', 'Thhalv10017801m.g' => 'esa', 'Thhalv10024983m.g' => 'esa', 'TPR.G12072' => 'tpr', 'TPR.G15769' => 'tpr', 'TPR.G16504' => 'tpr', 'TPR.G16506' => 'tpr', 'TPR.G24345' => 'tpr', 'TPR.G26666' => 'tpr', 'TPR.G27320' => 'tpr', 'TPR.G31819' => 'tpr', 'TPR.G38879' => 'tpr', 'TPR.G39015' => 'tpr', 'TPR.G8819' => 'tpr', 'TWI09G0924' => 'twi', 'TWI12G0811' => 'twi', 'TWI12G1294' => 'twi', 'TWI31G0150' => 'twi', 'TWI36G1262' => 'twi', 'TWI38G1287' => 'twi', 'TWI38G1633' => 'twi', 'TWI38G1982' => 'twi', 'TWI39G0116' => 'twi', 'TWI60G1011' => 'twi', 'TWI63G0171' => 'twi', 'TWI73G0839' => 'twi', 'TWI79G1511' => 'twi', 'unitig_0.g915' => 'ugi', 'unitig_0.g916' => 'ugi', 'unitig_21.g20219' => 'ugi', 'unitig_21.g20416' => 'ugi', 'unitig_578.g16132' => 'ugi', 'unitig_578.g16718' => 'ugi', 'unitig_62.g23481' => 'ugi', 'unitig_744.g24535' => 'ugi', 'unitig_749.g13525' => 'ugi', 'vmacro01248' => 'vma', 'vmacro02290' => 'vma', 'vmacro10946' => 'vma', 'vmacro11865' => 'vma', 'vmacro12493' => 'vma', 'vmacro17322' => 'vma', 'vmacro21599' => 'vma', 'vmacro23041' => 'vma', 'VMungo0251G0004' => 'vmu', 'VMungo0251G2639' => 'vmu', 'VMungo0251G2967' => 'vmu', 'VMungo0540G0864' => 'vmu', 'VMungo0540G1569' => 'vmu', 'VMungo0647G0317' => 'vmu', 'VMungo0720G1373' => 'vmu', 'VMungo0720G1508' => 'vmu', 'VMungo1080G0485' => 'vmu', 'VMungo1215G3177' => 'vmu', 'Zm00001eb112600' => 'zma', 'Zm00001eb120220' => 'zma', 'Zm00001eb153240' => 'zma', 'Zm00001eb168880' => 'zma', 'Zm00001eb213920' => 'zma', 'Zm00001eb228280' => 'zma', 'Zm00001eb254580' => 'zma', 'Zm00001eb272180' => 'zma', 'Zm00001eb293190' => 'zma', 'Zm00001eb322930' => 'zma', 'Zm00001eb353360' => 'zma', 'Zm00001eb353390' => 'zma', 'Zm00001eb353430' => 'zma', 'Zm00001eb353440' => 'zma', 'Zm00001eb353780' => 'zma' ) $gf_id = 'HOM05D000499' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000499' ) $data_identifier = 'HOM05D000499' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 29, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 12, 'amhyb' => (int) 8, 'aly' => (int) 12, 'aox' => (int) 9, 'arhy' => (int) 26, 'ath' => (int) 8, 'atr' => (int) 7, 'acertr' => (int) 10, 'cqu' => (int) 15, 'bca' => (int) 29, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 11, 'cansat' => (int) 8, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 9, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 8, 'cpa' => (int) 10, 'csa' => (int) 7, 'camsi' => (int) 20, 'dca' => (int) 8, 'din' => (int) 12, 'dzi' => (int) 14, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 6, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 38, 'gra' => (int) 16, 'vvi' => (int) 8, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 5, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 11, 'lja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 11, 'mpo' => (int) 3, 'mbi' => (int) 14, 'mdo' => (int) 14, 'mtr' => (int) 8, 'cme' => (int) 9, 'egut' => (int) 9, 'ama' => (int) 11, 'nta' => (int) 17, 'nnu' => (int) 11, 'oeu' => (int) 18, 'osa' => (int) 8, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 6, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 9, 'rsi' => (int) 9, 'sbr' => (int) 10, 'sbo' => (int) 8, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 10, 'sas' => (int) 10, 'shi' => (int) 6, 'smo' => (int) 7, 'sly' => (int) 14, 'spe' => (int) 10, 'spa' => (int) 8, 'tar' => (int) 19, 'tha' => (int) 10, 'tca' => (int) 8, 'esa' => (int) 8, 'tpr' => (int) 11, 'twi' => (int) 13, 'ugi' => (int) 9, 'vma' => (int) 8, 'vmu' => (int) 10, 'zma' => (int) 15 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb353780' $species_info = array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ) $local_species = 'mtr' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000499', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1066', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p29780' => 'bna', 'A02p33180' => 'bna', 'A03p16470' => 'bna', 'A03p66010' => 'bna', 'A04p25970' => 'bna', 'A06p01270' => 'bna', 'A06p46080' => 'bna', 'A07p11400' => 'bna', 'A08p01840' => 'bna', 'A08p08230' => 'bna', 'A08p25740' => 'bna', 'A09p32070' => 'bna', 'A09p37830' => 'bna', 'A09p42840' => 'bna', 'A09p42850' => 'bna', 'Aa31LG10G2060' => 'aar', 'Aa31LG2G7410' => 'aar', 'Aa31LG6G10200' => 'aar', 'Aa31LG6G16680' => 'aar', 'Aa31LG6G8470' => 'aar', 'Aa31LG9G12730' => 'aar', 'Aa31LG9G13680' => 'aar', 'Aa31LG9G14920' => 'aar', 'Aa31LG9G6650' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4977' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5467' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3254' => 'aag', 'Actinidia02578' => 'ach', 'Actinidia07693' => 'ach', 'Actinidia08413' => 'ach', 'Actinidia08414' => 'ach', 'Actinidia15289' => 'ach', 'Actinidia19871' => 'ach', 'Actinidia21475' => 'ach', 'Actinidia22576' => 'ach', 'Actinidia28327' => 'ach', 'Actinidia32491' => 'ach', 'Actinidia39463' => 'ach', 'Actinidia39571' => 'ach', 'Ah.01g013750' => 'amhyb', 'Ah.01g023210' => 'amhyb', 'Ah.04g164850' => 'amhyb', 'Ah.05g178060' => 'amhyb', 'Ah.07g204270' => 'amhyb', 'Ah.07g208480' => 'amhyb', 'Ah.09g237410' => 'amhyb', 'Ah.14g089460' => 'amhyb', 'AL1G41790' => 'aly', 'AL1G49050' => 'aly', 'AL1G53810' => 'aly', 'AL1G61400' => 'aly', 'AL4G18580' => 'aly', 'AL5G12510' => 'aly', 'AL5G12540' => 'aly', 'AL6G43230' => 'aly', 'AL7G10370' => 'aly', 'AL7G19250' => 'aly', 'AL8G12240' => 'aly', 'AL8G18540' => 'aly', 'Aqoxy1G02409' => 'aox', 'Aqoxy2G03993' => 'aox', 'Aqoxy3G03357' => 'aox', 'Aqoxy4G00785' => 'aox', 'Aqoxy5G02598' => 'aox', 'Aqoxy6G00132' => 'aox', 'Aqoxy7G01776' => 'aox', 'Aqoxy7G02316' => 'aox', 'Aqoxy7G03973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.12AFKW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B8730' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27IQR1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3F75VG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3RE0GA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41TCQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.527VTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FIR39' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5W8UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DA38EV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ63HS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H1I32C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HC27T5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4M8AP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7N3CZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9UVDZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LS1NQA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT1D4B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SKC4TM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCFV76' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF9Q1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQWD9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1ZM88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WE07RT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YCK7VH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJE6Q6' => 'arhy', 'AT1G28240' => 'ath', 'AT1G34550' => 'ath', 'AT1G53040' => 'ath', 'AT2G02910' => 'ath', 'AT4G09630' => 'ath', 'AT4G38500' => 'ath', 'AT5G42660' => 'ath', 'AT5G46220' => 'ath', 'ATR0152G026' => 'atr', 'ATR0564G343' => 'atr', 'ATR0706G151' => 'atr', 'ATR0733G207' => 'atr', 'ATR0751G234' => 'atr', 'ATR0807G048' => 'atr', 'ATR1091G084' => 'atr', 'Atru.chr10.1229' => 'acertr', 'Atru.chr10.1230' => 'acertr', 'Atru.chr10.1874' => 'acertr', 'Atru.chr11.1808' => 'acertr', 'Atru.chr13.1795' => 'acertr', 'Atru.chr13.570' => 'acertr', 'Atru.chr2.2608' => 'acertr', 'Atru.chr2.2609' => 'acertr', 'Atru.chr5.3428' => 'acertr', 'Atru.chr8.1171' => 'acertr', 'AUR62004651' => 'cqu', 'AUR62008675' => 'cqu', 'AUR62010014' => 'cqu', 'AUR62013004' => 'cqu', 'AUR62014825' => 'cqu', 'AUR62015015' => 'cqu', 'AUR62015151' => 'cqu', 'AUR62017020' => 'cqu', 'AUR62019422' => 'cqu', 'AUR62023570' => 'cqu', 'AUR62025571' => 'cqu', 'AUR62029098' => 'cqu', 'AUR62033863' => 'cqu', 'AUR62034296' => 'cqu', 'AUR62040075' => 'cqu', 'BcaB02g07334' => 'bca', 'BcaB02g10575' => 'bca', 'BcaB03g12119' => 'bca', 'BcaB03g12120' => 'bca', 'BcaB03g13945' => 'bca', 'BcaB04g17123' => 'bca', 'BcaB04g17867' => 'bca', 'BcaB04g19839' => 'bca', 'BcaB07g30317' => 'bca', 'BcaB07g32432' => 'bca', 'BcaB07g33362' => 'bca', 'BcaB08g36611' => 'bca', 'BcaC01g00028' => 'bca', 'BcaC01g01356' => 'bca', 'BcaC01g02034' => 'bca', 'BcaC01g06051' => 'bca', 'BcaC03g16839' => 'bca', 'BcaC03g17176' => 'bca', 'BcaC05g26829' => 'bca', 'BcaC06g31490' => 'bca', 'BcaC06g35344' => 'bca', 'BcaC06g36570' => 'bca', 'BcaC07g37537' => 'bca', 'BcaC08g43491' => 'bca', 'BcaC08g43773' => 'bca', 'BcaNung00234' => 'bca', 'BcaNung01982' => 'bca', 'BcaNung03707' => 'bca', 'BcaNung06454' => 'bca', 'BolC2t10762H' => 'bol', 'BolC2t11191H' => 'bol', 'BolC3t14322H' => 'bol', 'BolC3t19747H' => 'bol', 'BolC3t21425H' => 'bol', 'BolC4t27800H' => 'bol', 'BolC5t31423H' => 'bol', 'BolC6t35951H' => 'bol', 'BolC6t36282H' => 'bol', 'BolC7t40678H' => 'bol', 'BolC7t40679H' => 'bol', 'BolC7t42222H' => 'bol', 'BolC7t43492H' => 'bol', 'BolC7t46785H' => 'bol', 'BolC8t47853H' => 'bol', 'BolC9t56805H' => 'bol', 'BraA02t08000Z' => 'bra', 'BraA02t08341Z' => 'bra', 'BraA03t10936Z' => 'bra', 'BraA03t15657Z' => 'bra', 'BraA04t18100Z' => 'bra', 'BraA05t20523Z' => 'bra', 'BraA06t23353Z' => 'bra', 'BraA06t27473Z' => 'bra', 'BraA06t27769Z' => 'bra', 'BraA07t28928Z' => 'bra', 'BraA08t32236Z' => 'bra', 'BraA08t32841Z' => 'bra', 'BraA08t34524Z' => 'bra', 'BraA09t38742Z' => 'bra', 'BraA09t39295Z' => 'bra', 'C02p47180' => 'bna', 'C02p50990' => 'bna', 'C03p19360' => 'bna', 'C03p74950' => 'bna', 'C03p91000' => 'bna', 'C04p63260' => 'bna', 'C05p27050' => 'bna', 'C06p08750' => 'bna', 'C06p11490' => 'bna', 'C07p02820' => 'bna', 'C07p17180' => 'bna', 'C07p29440' => 'bna', 'C07p63730' => 'bna', 'C09p39260' => 'bna', 'CAN.G1164.34' => 'can', 'CAN.G1164.39' => 'can', 'CAN.G1530.3' => 'can', 'CAN.G162.61' => 'can', 'CAN.G176.6' => 'can', 'CAN.G289.49' => 'can', 'CAN.G370.21' => 'can', 'CAN.G370.22' => 'can', 'CAN.G371.117' => 'can', 'CAN.G58.37' => 'can', 'CAN.G588.98' => 'can', 'CANSAT21G2266' => 'cansat', 'CANSAT25G2799' => 'cansat', 'CANSAT35G0862' => 'cansat', 'CANSAT35G1704' => 'cansat', 'CANSAT35G1760' => 'cansat', 'CANSAT56G3971' => 'cansat', 'CANSAT56G4116' => 'cansat', 'CANSAT80G1259' => 'cansat', 'CARHR027730' => 'chi', 'CARHR033880' => 'chi', 'CARHR043270' => 'chi', 'CARHR145330' => 'chi', 'CARHR145340' => 'chi', 'CARHR175570' => 'chi', 'CARHR181570' => 'chi', 'CARHR258470' => 'chi', 'CARHR260490' => 'chi', 'CARHR294220' => 'chi', 'Carub.0001s2668' => 'cru', 'Carub.0001s3257' => 'cru', 'Carub.0001s4220' => 'cru', 'Carub.0005s0179' => 'cru', 'Carub.0006s2807' => 'cru', 'Carub.0007s0039' => 'cru', 'Carub.0008s0169' => 'cru', 'Carub.0008s0636' => 'cru', 'Ca_00338_v3' => 'car', 'Ca_00542_v3' => 'car', 'Ca_01844_v3' => 'car', 'Ca_10611_v3' => 'car', 'Ca_13326_v3' => 'car', 'Ca_17944_v3' => 'car', 'Ca_18546_v3' => 'car', 'Ca_24219_v3' => 'car', 'Ca_29972_v3' => 'car', 'CBR_g3681' => 'cbr', 'CBR_g40021' => 'cbr', 'Cc01_g08140' => 'ccan', 'Cc02_g13410' => 'ccan', 'Cc02_g37480' => 'ccan', 'Cc05_g12030' => 'ccan', 'Cc09_g03370' => 'ccan', 'Cc09_g10300' => 'ccan', 'Cc10_g03530' => 'ccan', 'Cc10_g11380' => 'ccan', 'CDE01G0176' => 'cde', 'CDE02G0675' => 'cde', 'CDE02G0942' => 'cde', 'CDE02G1153' => 'cde', 'CDE02G4177' => 'cde', 'CDE04G2117' => 'cde', 'CDE04G2736' => 'cde', 'CDE08G1161' => 'cde', 'CDE09G1238' => 'cde', 'Cfa000467' => 'cfa', 'Cfa000947' => 'cfa', 'Cfa004969' => 'cfa', 'Cfa005284' => 'cfa', 'Cfa008993' => 'cfa', 'Cfa018187' => 'cfa', 'Cfa018454' => 'cfa', 'Cfa020585' => 'cfa', 'Ciclev10000424m.g' => 'ccl', 'Ciclev10003605m.g' => 'ccl', 'Ciclev10007828m.g' => 'ccl', 'Ciclev10014620m.g' => 'ccl', 'Ciclev10015169m.g' => 'ccl', 'Ciclev10018291m.g' => 'ccl', 'Ciclev10028256m.g' => 'ccl', 'Ciclev10033822m.g' => 'ccl', 'CiPaw.05G060300' => 'cil', 'CiPaw.05G085000' => 'cil', 'CiPaw.06G083700' => 'cil', 'CiPaw.06G120300' => 'cil', 'CiPaw.09G060500' => 'cil', 'CiPaw.09G123800' => 'cil', 'CiPaw.11G169700' => 'cil', 'CiPaw.12G118300' => 'cil', 'CiPaw.15G071000' => 'cil', 'CiPaw.15G081900' => 'cil', 'ClCG01G024610' => 'cla', 'ClCG03G006070' => 'cla', 'ClCG05G019250' => 'cla', 'ClCG09G009500' => 'cla', 'ClCG11G008200' => 'cla', 'ClCG11G018080' => 'cla', 'COL.COLO4_17373' => 'col', 'COL.COLO4_22994' => 'col', 'COL.COLO4_26389' => 'col', 'COL.COLO4_27170' => 'col', 'COL.COLO4_31074' => 'col', 'COL.COLO4_31465' => 'col', 'COL.COLO4_36438' => 'col', 'COL.COLO4_36439' => 'col', 'Cpa.g.c38781' => 'cpa', 'Cpa.g.sc128.12' => 'cpa', 'Cpa.g.sc166.7' => 'cpa', 'Cpa.g.sc166.8' => 'cpa', 'Cpa.g.sc20.111' => 'cpa', 'Cpa.g.sc27.31' => 'cpa', 'Cpa.g.sc64.36' => 'cpa', 'Cpa.g.sc64.37' => 'cpa', 'Cpa.g.sc66.49' => 'cpa', 'Cpa.g.sc80.64' => 'cpa', 'CsaV3_1G012320' => 'csa', 'CsaV3_2G008480' => 'csa', 'CsaV3_2G033450' => 'csa', 'CsaV3_3G044830' => 'csa', 'CsaV3_4G033710' => 'csa', 'CsaV3_6G051730' => 'csa', 'CsaV3_7G025350' => 'csa', 'CSS0001067' => 'camsi', 'CSS0005996' => 'camsi', 'CSS0006590' => 'camsi', 'CSS0009673' => 'camsi', 'CSS0010201' => 'camsi', 'CSS0010549' => 'camsi', 'CSS0011364' => 'camsi', 'CSS0014473' => 'camsi', 'CSS0014961' => 'camsi', 'CSS0020191' => 'camsi', 'CSS0021165' => 'camsi', 'CSS0022306' => 'camsi', 'CSS0030591' => 'camsi', 'CSS0030696' => 'camsi', 'CSS0032653' => 'camsi', 'CSS0037487' => 'camsi', 'CSS0041102' => 'camsi', 'CSS0041261' => 'camsi', 'CSS0046246' => 'camsi', 'CSS0049256' => 'camsi', 'DCAR_004075' => 'dca', 'DCAR_011538' => 'dca', 'DCAR_019553' => 'dca', 'DCAR_020952' => 'dca', 'DCAR_021739' => 'dca', 'DCAR_027407' => 'dca', 'DCAR_027913' => 'dca', 'DCAR_028066' => 'dca', 'Dinv05899' => 'din', 'Dinv07563' => 'din', 'Dinv08010' => 'din', 'Dinv14125' => 'din', 'Dinv20172' => 'din', 'Dinv30743' => 'din', 'Dinv31229' => 'din', 'Dinv34162' => 'din', 'Dinv36028' => 'din', 'Dinv39368' => 'din', 'Dinv40565' => 'din', 'Dinv41706' => 'din', 'Duzib052G0089' => 'dzi', 'Duzib116G0641' => 'dzi', 'Duzib132G0069' => 'dzi', 'Duzib132G1219' => 'dzi', 'Duzib147G0278' => 'dzi', 'Duzib160G0480' => 'dzi', 'Duzib170G0661' => 'dzi', 'Duzib177G0591' => 'dzi', 'Duzib187G1353' => 'dzi', 'Duzib192G0858' => 'dzi', 'Duzib192G0883' => 'dzi', 'Duzib213G0506' => 'dzi', 'Duzib235G0289' => 'dzi', 'Duzib251G0422' => 'dzi', 'ECA232G3898' => 'eca', 'ECA233G5950' => 'eca', 'ECA234G1699' => 'eca', 'ECA234G2421' => 'eca', 'ECA236G0426' => 'eca', 'ECA236G4331' => 'eca', 'ECA248G2573' => 'eca', 'EL10Ac1g00077' => 'bvu', 'EL10Ac1g01746' => 'bvu', 'EL10Ac2g03464' => 'bvu', 'EL10Ac4g08176' => 'bvu', 'EL10Ac7g17521' => 'bvu', 'EL10Ac8g20386' => 'bvu', 'EL10Ac9g21343' => 'bvu', 'EL10Ac9g22688' => 'bvu', 'Eucgr.B03434' => 'egr', 'Eucgr.D00618' => 'egr', 'Eucgr.E02395' => 'egr', 'Eucgr.F01129' => 'egr', 'Eucgr.F02622' => 'egr', 'Eucgr.F04207' => 'egr', 'FAN01G0570' => 'fan', 'FAN03G3351' => 'fan', 'FAN06G3702' => 'fan', 'FAN07G2149' => 'fan', 'FAN10G3758' => 'fan', 'FAN11G1170' => 'fan', 'FAN11G2050' => 'fan', 'FAN11G2724' => 'fan', 'FAN12G1700' => 'fan', 'FAN12G2028' => 'fan', 'FAN15G1160' => 'fan', 'FAN15G3063' => 'fan', 'FAN16G2540' => 'fan', 'FAN16G3077' => 'fan', 'FAN16G3624' => 'fan', 'FAN17G0221' => 'fan', 'FAN20G2492' => 'fan', 'FAN20G2905' => 'fan', 'FAN21G0548' => 'fan', 'FAN21G1300' => 'fan', 'FAN22G0077' => 'fan', 'FAN22G1315' => 'fan', 'FAN24G1280' => 'fan', 'FAN24G1445' => 'fan', 'FAN24G3527' => 'fan', 'FAN25G0464' => 'fan', 'FAN25G2885' => 'fan', 'FAN25G3270' => 'fan', 'FAN27G1101' => 'fan', 'FAN27G2846' => 'fan', 'FAN27G3524' => 'fan', 'FvH4_2g11770' => 'fve', 'FvH4_2g15630' => 'fve', 'FvH4_3g05570' => 'fve', 'FvH4_3g09110' => 'fve', 'FvH4_3g19940' => 'fve', 'FvH4_4g04821' => 'fve', 'FvH4_4g31480' => 'fve', 'FvH4_7g01740' => 'fve', 'Glyma.05G130400' => 'gma', 'Glyma.05G156400' => 'gma', 'Glyma.07G197000' => 'gma', 'Glyma.08G085151' => 'gma', 'Glyma.08G114500' => 'gma', 'Glyma.08G300400' => 'gma', 'Glyma.10G215800' => 'gma', 'Glyma.12G224400' => 'gma', 'Glyma.13G179300' => 'gma', 'Glyma.13G218151' => 'gma', 'Glyma.13G238800' => 'gma', 'Glyma.13G276900' => 'gma', 'Glyma.14G078200' => 'gma', 'Glyma.15G074500' => 'gma', 'Glyma.15G094100' => 'gma', 'Glyma.17G247200' => 'gma', 'Glyma.18G120100' => 'gma', 'Glyma.20G176000' => 'gma', 'Gohir.A01G063600' => 'ghi', 'Gohir.A01G170301' => 'ghi', 'Gohir.A02G060500' => 'ghi', 'Gohir.A05G133850' => 'ghi', 'Gohir.A05G161400' => 'ghi', 'Gohir.A06G012900' => 'ghi', 'Gohir.A06G035901' => 'ghi', 'Gohir.A06G127100' => 'ghi', 'Gohir.A06G210500' => 'ghi', 'Gohir.A08G008650' => 'ghi', 'Gohir.A09G072700' => 'ghi', 'Gohir.A09G088301' => 'ghi', 'Gohir.A10G040600' => 'ghi', 'Gohir.A12G036300' => 'ghi', 'Gohir.A12G143350' => 'ghi', 'Gohir.A12G165500' => 'ghi', 'Gohir.A13G145700' => 'ghi', 'Gohir.D01G050000' => 'ghi', 'Gohir.D01G051366' => 'ghi', 'Gohir.D01G161350' => 'ghi', 'Gohir.D02G065900' => 'ghi', 'Gohir.D05G164200' => 'ghi', 'Gohir.D05G355500' => 'ghi', 'Gohir.D06G010400' => 'ghi', 'Gohir.D06G111250' => 'ghi', 'Gohir.D06G132000' => 'ghi', 'Gohir.D06G210500' => 'ghi', 'Gohir.D07G165675' => 'ghi', 'Gohir.D08G062240' => 'ghi', 'Gohir.D08G086101' => 'ghi', 'Gohir.D08G138060' => 'ghi', 'Gohir.D09G072300' => 'ghi', 'Gohir.D10G041400' => 'ghi', 'Gohir.D11G191020' => 'ghi', 'Gohir.D11G212066' => 'ghi', 'Gohir.D12G036300' => 'ghi', 'Gohir.D12G168600' => 'ghi', 'Gohir.D13G150600' => 'ghi', 'Gorai.001G057300' => 'gra', 'Gorai.002G069900' => 'gra', 'Gorai.002G200000' => 'gra', 'Gorai.003G067600' => 'gra', 'Gorai.005G074800' => 'gra', 'Gorai.006G087300' => 'gra', 'Gorai.008G037500' => 'gra', 'Gorai.008G181400' => 'gra', 'Gorai.009G169400' => 'gra', 'Gorai.009G387900' => 'gra', 'Gorai.010G013300' => 'gra', 'Gorai.010G153800' => 'gra', 'Gorai.010G255800' => 'gra', 'Gorai.011G043700' => 'gra', 'Gorai.011G198900' => 'gra', 'Gorai.013G168400' => 'gra', 'GSVIVG01005212001' => 'vvi', 'GSVIVG01006163001' => 'vvi', 'GSVIVG01009625001' => 'vvi', 'GSVIVG01014338001' => 'vvi', 'GSVIVG01020005001' => 'vvi', 'GSVIVG01021450001' => 'vvi', 'GSVIVG01023975001' => 'vvi', 'GSVIVG01034490001' => 'vvi', 'HanXRQChr04g0112071' => 'han', 'HanXRQChr05g0131151' => 'han', 'HanXRQChr09g0262371' => 'han', 'HanXRQChr09g0268401' => 'han', 'HanXRQChr10g0279241' => 'han', 'HanXRQChr10g0297961' => 'han', 'HanXRQChr11g0326231' => 'han', 'HanXRQChr11g0328471' => 'han', 'HanXRQChr16g0507941' => 'han', 'HanXRQChr17g0560211' => 'han', 'Haze_02108' => 'cav', 'Haze_02428' => 'cav', 'Haze_05593' => 'cav', 'Haze_06448' => 'cav', 'Haze_09427' => 'cav', 'Haze_12022' => 'cav', 'Haze_17612' => 'cav', 'Haze_17928' => 'cav', 'Hma1.2p1_0032F.1_g019250' => 'hma', 'Hma1.2p1_0163F.1_g072690' => 'hma', 'Hma1.2p1_0265F.1_g106710' => 'hma', 'Hma1.2p1_0286F.1_g113970' => 'hma', 'Hma1.2p1_0363F.1_g136640' => 'hma', 'Hma1.2p1_0584F.1_g183470' => 'hma', 'Hma1.2p1_0885F.1_g232570' => 'hma', 'HPP92_006022' => 'vpl', 'HPP92_007320' => 'vpl', 'HPP92_011521' => 'vpl', 'HPP92_019387' => 'vpl', 'HPP92_024038' => 'vpl', 'Hund05891' => 'sun', 'Hund06450' => 'sun', 'Hund12053' => 'sun', 'Hund16800' => 'sun', 'Hund21222' => 'sun', 'Hund22896' => 'sun', 'Hund23746' => 'sun', 'Hund27083' => 'sun', 'Lalb_Chr02g0141831' => 'lal', 'Lalb_Chr02g0141841' => 'lal', 'Lalb_Chr05g0220411' => 'lal', 'Lalb_Chr06g0162081' => 'lal', 'Lalb_Chr09g0327651' => 'lal', 'Lalb_Chr13g0295051' => 'lal', 'Lalb_Chr15g0086801' => 'lal', 'Lalb_Chr16g0383781' => 'lal', 'Lalb_Chr16g0383791' => 'lal', 'Lalb_Chr18g0055441' => 'lal', 'Lalb_Chr18g0059611' => 'lal', 'Lalb_Chr20g0109661' => 'lal', 'Lalb_Chr20g0109831' => 'lal', 'Lalb_Chr20g0121871' => 'lal', 'Lalb_Chr22g0355361' => 'lal', 'Lalb_Chr25g0286371' => 'lal', 'Lj1A1187G43' => 'lonja', 'Lj1A1205T50' => 'lonja', 'Lj1A800G33' => 'lonja', 'Lj1C1187T7' => 'lonja', 'Lj1C843T11' => 'lonja', 'Lj1g0010940' => 'lja', 'Lj2A288T69' => 'lonja', 'Lj3g0024276' => 'lja', 'Lj4A47T76' => 'lonja', 'Lj4g0005805' => 'lja', 'Lj4g0006097' => 'lja', 'Lj4g0008528' => 'lja', 'Lj4g0024907' => 'lja', 'Lj5g0012472' => 'lja', 'Lj5g0018648' => 'lja', 'Lj6C789G1' => 'lonja', 'Lj6g0004000' => 'lja', 'Lj7A292G67' => 'lonja', 'Lj7A292T64' => 'lonja', 'Lj9A400T58' => 'lonja', 'Lsat_1_v5_gn_1_126181' => 'lsa', 'Lsat_1_v5_gn_4_123041' => 'lsa', 'Lsat_1_v5_gn_4_133620' => 'lsa', 'Lsat_1_v5_gn_4_53221' => 'lsa', 'Lsat_1_v5_gn_4_71961' => 'lsa', 'Lsat_1_v5_gn_7_105241' => 'lsa', 'Lsat_1_v5_gn_7_21361' => 'lsa', 'Lsat_1_v5_gn_7_28860' => 'lsa', 'Lsat_1_v5_gn_7_31260' => 'lsa', 'Lsat_1_v5_gn_8_52801' => 'lsa', 'Manes.02G191400' => 'mes', 'Manes.03G110100' => 'mes', 'Manes.04G071100' => 'mes', 'Manes.05G100500' => 'mes', 'Manes.05G164700' => 'mes', 'Manes.15G087000' => 'mes', 'Manes.15G121500' => 'mes', 'Manes.16G028300' => 'mes', 'Manes.17G046100' => 'mes', 'Manes.17G069800' => 'mes', 'Manes.18G100500' => 'mes', 'Mapoly0002s0109' => 'mpo', 'Mapoly0024s0007' => 'mpo', 'Mapoly0089s0032' => 'mpo', 'MBI04_g42241_MAGBIO' => 'mbi', 'MBI05_g11988_MAGBIO' => 'mbi', 'MBI05_g35452_MAGBIO' => 'mbi', 'MBI07_g30179_MAGBIO' => 'mbi', 'MBI07_g35859_MAGBIO' => 'mbi', 'MBI07_g35860_MAGBIO' => 'mbi', 'MBI07_g37166_MAGBIO' => 'mbi', 'MBI08_g18172_MAGBIO' => 'mbi', 'MBI09_g08441_MAGBIO' => 'mbi', 'MBI13_g01676_MAGBIO' => 'mbi', 'MBI14_g42955_MAGBIO' => 'mbi', 'MBI16_g13161_MAGBIO' => 'mbi', 'MBI17_g27204_MAGBIO' => 'mbi', 'MBI19_g21595_MAGBIO' => 'mbi', 'MD00G1148400' => 'mdo', 'MD02G1301200' => 'mdo', 'MD03G1227800' => 'mdo', 'MD05G1041100' => 'mdo', 'MD05G1124800' => 'mdo', 'MD05G1284000' => 'mdo', 'MD05G1338800' => 'mdo', 'MD05G1338900' => 'mdo', 'MD07G1022800' => 'mdo', 'MD10G1047500' => 'mdo', 'MD10G1127500' => 'mdo', 'MD10G1262300' => 'mdo', 'MD10G1293800' => 'mdo', 'MD16G1074300' => 'mdo', 'Medtr1g021670' => 'mtr', 'Medtr1g096320' => 'mtr', 'Medtr2g013690' => 'mtr', 'Medtr2g019450' => 'mtr', 'Medtr2g085170' => 'mtr', 'Medtr4g088785' => 'mtr', 'Medtr8g055930' => 'mtr', 'Medtr8g085850' => 'mtr', 'MELO3C002605.2' => 'cme', 'MELO3C003891.2' => 'cme', 'MELO3C004012.2' => 'cme', 'MELO3C007134.2' => 'cme', 'MELO3C008118.2' => 'cme', 'MELO3C016700.2' => 'cme', 'MELO3C024127.2' => 'cme', 'MELO3C033361.2' => 'cme', 'MELO3C033362.2' => 'cme', 'Migut.C00430' => 'egut', 'Migut.C01246' => 'egut', 'Migut.E00101' => 'egut', 'Migut.H01486' => 'egut', 'Migut.H01939' => 'egut', 'Migut.K00360' => 'egut', 'Migut.M00910' => 'egut', 'Migut.M01139' => 'egut', 'Migut.N02677' => 'egut', 'MSTRG.13252' => 'ama', 'MSTRG.14701' => 'ama', 'MSTRG.1521' => 'ama', 'MSTRG.15884' => 'ama', 'MSTRG.16242' => 'ama', 'MSTRG.22285' => 'ama', 'MSTRG.22444' => 'ama', 'MSTRG.2349' => 'ama', 'MSTRG.26308' => 'ama', 'MSTRG.28296' => 'ama', 'MSTRG.9895' => 'ama', 'Nitab4.5_0000110g0060' => 'nta', 'Nitab4.5_0000420g0130' => 'nta', 'Nitab4.5_0000422g0030' => 'nta', 'Nitab4.5_0000560g0180' => 'nta', 'Nitab4.5_0000703g0100' => 'nta', 'Nitab4.5_0000786g0200' => 'nta', 'Nitab4.5_0001336g0020' => 'nta', 'Nitab4.5_0001796g0030' => 'nta', 'Nitab4.5_0003348g0060' => 'nta', 'Nitab4.5_0003698g0040' => 'nta', 'Nitab4.5_0003942g0090' => 'nta', 'Nitab4.5_0004775g0070' => 'nta', 'Nitab4.5_0004864g0030' => 'nta', 'Nitab4.5_0005615g0020' => 'nta', 'Nitab4.5_0009288g0030' => 'nta', 'Nitab4.5_0009341g0010' => 'nta', 'Nitab4.5_0009535g0010' => 'nta', 'Nn1g03995' => 'nnu', 'Nn1g04100' => 'nnu', 'Nn1g06530' => 'nnu', 'Nn3g16404' => 'nnu', 'Nn3g17212' => 'nnu', 'Nn3g20776' => 'nnu', 'Nn3g21923' => 'nnu', 'Nn5g27737' => 'nnu', 'Nn5g29461' => 'nnu', 'Nn7g38355' => 'nnu', 'Nn8g39873' => 'nnu', 'Oeu000548.2' => 'oeu', 'Oeu004672.1' => 'oeu', 'Oeu015605.2' => 'oeu', 'Oeu016092.1' => 'oeu', 'Oeu017879.3' => 'oeu', 'Oeu024910.1' => 'oeu', 'Oeu028965.1' => 'oeu', 'Oeu031269.1' => 'oeu', 'Oeu031270.1' => 'oeu', 'Oeu032535.1' => 'oeu', 'Oeu034151.1' => 'oeu', 'Oeu034152.1' => 'oeu', 'Oeu034588.2' => 'oeu', 'Oeu050846.1' => 'oeu', 'Oeu050849.2' => 'oeu', 'Oeu051063.2' => 'oeu', 'Oeu052368.1' => 'oeu', 'Oeu052370.1' => 'oeu', 'Os01g0210400' => 'osa', 'Os01g0304300' => 'osa', 'Os01g0749100' => 'osa', 'Os02g0745800' => 'osa', 'Os03g0769050' => 'osa', 'Os05g0531500' => 'osa', 'Os06g0724300' => 'osa', 'Os11g0198100' => 'osa', 'Peaxi162Scf00069g01425' => 'pax', 'Peaxi162Scf00280g00811' => 'pax', 'Peaxi162Scf00310g00615' => 'pax', 'Peaxi162Scf00362g00542' => 'pax', 'Peaxi162Scf00461g00310' => 'pax', 'Peaxi162Scf00530g00118' => 'pax', 'Peaxi162Scf00541g00057' => 'pax', 'Peaxi162Scf00661g00017' => 'pax', 'Peaxi162Scf00926g00027' => 'pax', 'Peaxi162Scf01064g00263' => 'pax', 'Peaxi162Scf01211g00135' => 'pax', 'PGR004G2336' => 'pgr', 'PGR042G0327' => 'pgr', 'PGR042G1957' => 'pgr', 'PGR042G2003' => 'pgr', 'PGR042G3929' => 'pgr', 'PGR083G1137' => 'pgr', 'PGR083G1364' => 'pgr', 'PGSC0003DMG400003381' => 'stu', 'PGSC0003DMG400003417' => 'stu', 'PGSC0003DMG400008981' => 'stu', 'PGSC0003DMG400012417' => 'stu', 'PGSC0003DMG400012823' => 'stu', 'PGSC0003DMG400016885' => 'stu', 'PGSC0003DMG400022812' => 'stu', 'PGSC0003DMG400029726' => 'stu', 'PGSC0003DMG401009243' => 'stu', 'PGSC0003DMG401031505' => 'stu', 'PGSC0003DMG402031505' => 'stu', 'Phvul.001G017600' => 'pvu', 'Phvul.002G193500' => 'pvu', 'Phvul.002G228900' => 'pvu', 'Phvul.002G236800' => 'pvu', 'Phvul.003G049500' => 'pvu', 'Phvul.005G072000' => 'pvu', 'Phvul.006G164800' => 'pvu', 'Phvul.006G185100' => 'pvu', 'Phvul.007G090000' => 'pvu', 'Potri.001G399800' => 'ptr', 'Potri.002G149900' => 'ptr', 'Potri.004G044100' => 'ptr', 'Potri.004G177600' => 'ptr', 'Potri.009G138000' => 'ptr', 'Potri.010G094000' => 'ptr', 'Potri.011G053000' => 'ptr', 'Potri.011G119300' => 'ptr', 'Potri.013G113700' => 'ptr', 'Potri.018G107800' => 'ptr', 'Potri.019G084100' => 'ptr', 'Pp3c14_23720' => 'ppa', 'Pp3c16_6340' => 'ppa', 'Pp3c23_13420' => 'ppa', 'Pp3c24_2740' => 'ppa', 'Pp3c25_860' => 'ppa', 'Pp3c8_21750' => 'ppa', 'Prupe.1G273000' => 'ppe', 'Prupe.1G273700' => 'ppe', 'Prupe.1G274100' => 'ppe', 'Prupe.2G023300' => 'ppe', 'Prupe.4G048000' => 'ppe', 'Prupe.4G080400' => 'ppe', 'Prupe.4G181200' => 'ppe', 'Prupe.8G056900' => 'ppe', 'Prupe.8G168700' => 'ppe', 'Psat1g189080' => 'psa', 'Psat1g204760' => 'psa', 'Psat4g175560' => 'psa', 'Psat4g177720' => 'psa', 'Psat5g244240' => 'psa', 'Psat6g010720' => 'psa', 'Psat6g187200' => 'psa', 'Psat7g072040' => 'psa', 'PSO017G3501' => 'pso', 'PSO063G2148' => 'pso', 'PSO063G5608' => 'pso', 'PSO210G6392' => 'pso', 'PSO541G2319' => 'pso', 'PSO541G2836' => 'pso', 'PSO541G4012' => 'pso', 'PSO541G6253' => 'pso', 'PSO675G0580' => 'pso', 'PSO675G0856' => 'pso', 'PSO675G5635' => 'pso', 'PSO675G9157' => 'pso', 'PSO832G1660' => 'pso', 'PSO832G1969' => 'pso', 'QL02p007186' => 'qlo', 'QL02p033904' => 'qlo', 'QL03p064391' => 'qlo', 'QL05p040593' => 'qlo', 'QL05p058242' => 'qlo', 'QL08p021825' => 'qlo', 'QL11p004981' => 'qlo', 'RcHm_v2.0_Chr1g0318301' => 'rch', 'RcHm_v2.0_Chr4g0418501' => 'rch', 'RcHm_v2.0_Chr4g0439971' => 'rch', 'RcHm_v2.0_Chr5g0008541' => 'rch', 'RcHm_v2.0_Chr5g0014101' => 'rch', 'RcHm_v2.0_Chr5g0014131' => 'rch', 'RcHm_v2.0_Chr5g0033621' => 'rch', 'RcHm_v2.0_Chr6g0272041' => 'rch', 'RcHm_v2.0_Chr6g0278831' => 'rch', 'Rhsim02G0130400' => 'rsi', 'Rhsim02G0171100' => 'rsi', 'Rhsim05G0053000' => 'rsi', 'Rhsim05G0053100' => 'rsi', 'Rhsim06G0096500' => 'rsi', 'Rhsim06G0096600' => 'rsi', 'Rhsim06G0199100' => 'rsi', 'Rhsim12G0062300' => 'rsi', 'Rhsim12G0062800' => 'rsi', 'Sabra02G0118600' => 'sbr', 'Sabra04G0027300' => 'sbr', 'Sabra04G0119500' => 'sbr', 'Sabra08G0112500' => 'sbr', 'Sabra11G0036800' => 'sbr', 'Sabra11G0103800' => 'sbr', 'Sabra13G0096300' => 'sbr', 'Sabra16G0262300' => 'sbr', 'Sabra18G0091700' => 'sbr', 'Sabra19G0095400' => 'sbr', 'SalBow6G3080' => 'sbo', 'SalBow7G1157' => 'sbo', 'SalBow7G2123' => 'sbo', 'SalBow7G2285' => 'sbo', 'SalBow7G3537' => 'sbo', 'SalBow8G2947' => 'sbo', 'SalBow8G4463' => 'sbo', 'SalBow8G5466' => 'sbo', 'Sc01g0001750' => 'sci', 'Sc02g0006640' => 'sci', 'Sc02g0006670' => 'sci', 'Sc04g0008220' => 'sci', 'Sc05g0006190' => 'sci', 'Sc08g0002760' => 'sci', 'Sc17g0006170' => 'sci', 'Sc22g0002050' => 'sci', 'Sc23g0001190' => 'sci', 'Sc24g0000980' => 'sci', 'Sed0006245' => 'sed', 'Sed0007543' => 'sed', 'Sed0009411' => 'sed', 'Sed0010765' => 'sed', 'Sed0012944' => 'sed', 'Sed0014682' => 'sed', 'Sed0016174' => 'sed', 'Sed0016796' => 'sed', 'Sed0020317' => 'sed', 'Sed0021467' => 'sed', 'SEGI_01316' => 'sgi', 'SEGI_03374' => 'sgi', 'SEGI_16265' => 'sgi', 'SEGI_18569' => 'sgi', 'SEGI_20351' => 'sgi', 'SEGI_26395' => 'sgi', 'SEGI_29469' => 'sgi', 'SEGI_34771' => 'sgi', 'SEGI_36769' => 'sgi', 'SEGI_37139' => 'sgi', 'SGA_v2.0_scaffold100G29687' => 'sas', 'SGA_v2.0_scaffold118G32472' => 'sas', 'SGA_v2.0_scaffold14G07051' => 'sas', 'SGA_v2.0_scaffold183G39845' => 'sas', 'SGA_v2.0_scaffold1G00174' => 'sas', 'SGA_v2.0_scaffold22G09714' => 'sas', 'SGA_v2.0_scaffold333G48992' => 'sas', 'SGA_v2.0_scaffold46G17491' => 'sas', 'SGA_v2.0_scaffold49G18294' => 'sas', 'SGA_v2.0_scaffold63G21658' => 'sas', 'SHI01741' => 'shi', 'SHI05771' => 'shi', 'SHI18077' => 'shi', 'SHI20525' => 'shi', 'SHI20527' => 'shi', 'SHI20528' => 'shi', 'SMO172G0185' => 'smo', 'SMO198G0020' => 'smo', 'SMO351G0006' => 'smo', 'SMO356G0118' => 'smo', 'SMO358G0296' => 'smo', 'SMO367G0079' => 'smo', 'SMO367G1277' => 'smo', 'Solyc01g014220.3' => 'sly', 'Solyc01g111770.2' => 'sly', 'Solyc02g078180.3' => 'sly', 'Solyc03g006430.3' => 'sly', 'Solyc03g006456.1' => 'sly', 'Solyc03g079860.2' => 'sly', 'Solyc04g079770.3' => 'sly', 'Solyc05g007430.4' => 'sly', 'Solyc07g063150.3' => 'sly', 'Solyc08g016620.3' => 'sly', 'Solyc09g057590.3' => 'sly', 'Solyc09g057600.1' => 'sly', 'Solyc10g009050.3' => 'sly', 'Solyc11g017420.2' => 'sly', 'Sopen01g053810' => 'spe', 'Sopen02g023040' => 'spe', 'Sopen03g002440' => 'spe', 'Sopen04g033350' => 'spe', 'Sopen05g003310' => 'spe', 'Sopen07g004050' => 'spe', 'Sopen07g031340' => 'spe', 'Sopen08g006990' => 'spe', 'Sopen10g004830' => 'spe', 'Sopen11g009370' => 'spe', 'Sp1g24450' => 'spa', 'Sp1g29670' => 'spa', 'Sp1g39600' => 'spa', 'Sp2g11080' => 'spa', 'Sp2g13970' => 'spa', 'Sp4g16130' => 'spa', 'Sp6g13080' => 'spa', 'Sp7g37270' => 'spa', 'TAR371G0065' => 'tar', 'TAR376G0340' => 'tar', 'TAR376G0435' => 'tar', 'TAR381G0002' => 'tar', 'TAR381G1236' => 'tar', 'TAR624G0055' => 'tar', 'TAR624G0324' => 'tar', 'TAR624G0696' => 'tar', 'TAR624G0906' => 'tar', 'TAR625G0107' => 'tar', 'TAR626G0015' => 'tar', 'TAR626G1356' => 'tar', 'TAR627G0888' => 'tar', 'TAR628G0399' => 'tar', 'TAR628G1327' => 'tar', 'TAR629G2831' => 'tar', 'TAR629G2874' => 'tar', 'TAR633G1432' => 'tar', 'TAR633G2771' => 'tar', 'THA.LOC104803394' => 'tha', 'THA.LOC104805153' => 'tha', 'THA.LOC104806784' => 'tha', 'THA.LOC104810473' => 'tha', 'THA.LOC104813100' => 'tha', 'THA.LOC104814215' => 'tha', 'THA.LOC104815554' => 'tha', 'THA.LOC104820544' => 'tha', 'THA.LOC104824754' => 'tha', 'THA.LOC104827717' => 'tha', 'Thecc.02G031400' => 'tca', 'Thecc.02G055900' => 'tca', 'Thecc.02G350800' => 'tca', 'Thecc.06G150900' => 'tca', 'Thecc.06G186600' => 'tca', 'Thecc.07G089600' => 'tca', 'Thecc.08G020400' => 'tca', 'Thecc.08G182100' => 'tca', 'Thhalv10000873m.g' => 'esa', 'Thhalv10004185m.g' => 'esa', 'Thhalv10006981m.g' => 'esa', 'Thhalv10007204m.g' => 'esa', 'Thhalv10011374m.g' => 'esa', 'Thhalv10013482m.g' => 'esa', 'Thhalv10017801m.g' => 'esa', 'Thhalv10024983m.g' => 'esa', 'TPR.G12072' => 'tpr', 'TPR.G15769' => 'tpr', 'TPR.G16504' => 'tpr', 'TPR.G16506' => 'tpr', 'TPR.G24345' => 'tpr', 'TPR.G26666' => 'tpr', 'TPR.G27320' => 'tpr', 'TPR.G31819' => 'tpr', 'TPR.G38879' => 'tpr', 'TPR.G39015' => 'tpr', 'TPR.G8819' => 'tpr', 'TWI09G0924' => 'twi', 'TWI12G0811' => 'twi', 'TWI12G1294' => 'twi', 'TWI31G0150' => 'twi', 'TWI36G1262' => 'twi', 'TWI38G1287' => 'twi', 'TWI38G1633' => 'twi', 'TWI38G1982' => 'twi', 'TWI39G0116' => 'twi', 'TWI60G1011' => 'twi', 'TWI63G0171' => 'twi', 'TWI73G0839' => 'twi', 'TWI79G1511' => 'twi', 'unitig_0.g915' => 'ugi', 'unitig_0.g916' => 'ugi', 'unitig_21.g20219' => 'ugi', 'unitig_21.g20416' => 'ugi', 'unitig_578.g16132' => 'ugi', 'unitig_578.g16718' => 'ugi', 'unitig_62.g23481' => 'ugi', 'unitig_744.g24535' => 'ugi', 'unitig_749.g13525' => 'ugi', 'vmacro01248' => 'vma', 'vmacro02290' => 'vma', 'vmacro10946' => 'vma', 'vmacro11865' => 'vma', 'vmacro12493' => 'vma', 'vmacro17322' => 'vma', 'vmacro21599' => 'vma', 'vmacro23041' => 'vma', 'VMungo0251G0004' => 'vmu', 'VMungo0251G2639' => 'vmu', 'VMungo0251G2967' => 'vmu', 'VMungo0540G0864' => 'vmu', 'VMungo0540G1569' => 'vmu', 'VMungo0647G0317' => 'vmu', 'VMungo0720G1373' => 'vmu', 'VMungo0720G1508' => 'vmu', 'VMungo1080G0485' => 'vmu', 'VMungo1215G3177' => 'vmu', 'Zm00001eb112600' => 'zma', 'Zm00001eb120220' => 'zma', 'Zm00001eb153240' => 'zma', 'Zm00001eb168880' => 'zma', 'Zm00001eb213920' => 'zma', 'Zm00001eb228280' => 'zma', 'Zm00001eb254580' => 'zma', 'Zm00001eb272180' => 'zma', 'Zm00001eb293190' => 'zma', 'Zm00001eb322930' => 'zma', 'Zm00001eb353360' => 'zma', 'Zm00001eb353390' => 'zma', 'Zm00001eb353430' => 'zma', 'Zm00001eb353440' => 'zma', 'Zm00001eb353780' => 'zma' ), 'gf_id' => 'HOM05D000499', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000499' ), 'data_identifier' => 'HOM05D000499', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000499', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1066', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p29780' => 'bna', 'A02p33180' => 'bna', 'A03p16470' => 'bna', 'A03p66010' => 'bna', 'A04p25970' => 'bna', 'A06p01270' => 'bna', 'A06p46080' => 'bna', 'A07p11400' => 'bna', 'A08p01840' => 'bna', 'A08p08230' => 'bna', 'A08p25740' => 'bna', 'A09p32070' => 'bna', 'A09p37830' => 'bna', 'A09p42840' => 'bna', 'A09p42850' => 'bna', 'Aa31LG10G2060' => 'aar', 'Aa31LG2G7410' => 'aar', 'Aa31LG6G10200' => 'aar', 'Aa31LG6G16680' => 'aar', 'Aa31LG6G8470' => 'aar', 'Aa31LG9G12730' => 'aar', 'Aa31LG9G13680' => 'aar', 'Aa31LG9G14920' => 'aar', 'Aa31LG9G6650' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4977' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5467' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3254' => 'aag', 'Actinidia02578' => 'ach', 'Actinidia07693' => 'ach', 'Actinidia08413' => 'ach', 'Actinidia08414' => 'ach', 'Actinidia15289' => 'ach', 'Actinidia19871' => 'ach', 'Actinidia21475' => 'ach', 'Actinidia22576' => 'ach', 'Actinidia28327' => 'ach', 'Actinidia32491' => 'ach', 'Actinidia39463' => 'ach', 'Actinidia39571' => 'ach', 'Ah.01g013750' => 'amhyb', 'Ah.01g023210' => 'amhyb', 'Ah.04g164850' => 'amhyb', 'Ah.05g178060' => 'amhyb', 'Ah.07g204270' => 'amhyb', 'Ah.07g208480' => 'amhyb', 'Ah.09g237410' => 'amhyb', 'Ah.14g089460' => 'amhyb', 'AL1G41790' => 'aly', 'AL1G49050' => 'aly', 'AL1G53810' => 'aly', 'AL1G61400' => 'aly', 'AL4G18580' => 'aly', 'AL5G12510' => 'aly', 'AL5G12540' => 'aly', 'AL6G43230' => 'aly', 'AL7G10370' => 'aly', 'AL7G19250' => 'aly', 'AL8G12240' => 'aly', 'AL8G18540' => 'aly', 'Aqoxy1G02409' => 'aox', 'Aqoxy2G03993' => 'aox', 'Aqoxy3G03357' => 'aox', 'Aqoxy4G00785' => 'aox', 'Aqoxy5G02598' => 'aox', 'Aqoxy6G00132' => 'aox', 'Aqoxy7G01776' => 'aox', 'Aqoxy7G02316' => 'aox', 'Aqoxy7G03973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.12AFKW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B8730' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27IQR1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3F75VG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3RE0GA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41TCQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.527VTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FIR39' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5W8UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DA38EV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ63HS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H1I32C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HC27T5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4M8AP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7N3CZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9UVDZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LS1NQA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT1D4B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SKC4TM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCFV76' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF9Q1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQWD9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1ZM88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WE07RT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YCK7VH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJE6Q6' => 'arhy', 'AT1G28240' => 'ath', 'AT1G34550' => 'ath', 'AT1G53040' => 'ath', 'AT2G02910' => 'ath', 'AT4G09630' => 'ath', 'AT4G38500' => 'ath', 'AT5G42660' => 'ath', 'AT5G46220' => 'ath', 'ATR0152G026' => 'atr', 'ATR0564G343' => 'atr', 'ATR0706G151' => 'atr', 'ATR0733G207' => 'atr', 'ATR0751G234' => 'atr', 'ATR0807G048' => 'atr', 'ATR1091G084' => 'atr', 'Atru.chr10.1229' => 'acertr', 'Atru.chr10.1230' => 'acertr', 'Atru.chr10.1874' => 'acertr', 'Atru.chr11.1808' => 'acertr', 'Atru.chr13.1795' => 'acertr', 'Atru.chr13.570' => 'acertr', 'Atru.chr2.2608' => 'acertr', 'Atru.chr2.2609' => 'acertr', 'Atru.chr5.3428' => 'acertr', 'Atru.chr8.1171' => 'acertr', 'AUR62004651' => 'cqu', 'AUR62008675' => 'cqu', 'AUR62010014' => 'cqu', 'AUR62013004' => 'cqu', 'AUR62014825' => 'cqu', 'AUR62015015' => 'cqu', 'AUR62015151' => 'cqu', 'AUR62017020' => 'cqu', 'AUR62019422' => 'cqu', 'AUR62023570' => 'cqu', 'AUR62025571' => 'cqu', 'AUR62029098' => 'cqu', 'AUR62033863' => 'cqu', 'AUR62034296' => 'cqu', 'AUR62040075' => 'cqu', 'BcaB02g07334' => 'bca', 'BcaB02g10575' => 'bca', 'BcaB03g12119' => 'bca', 'BcaB03g12120' => 'bca', 'BcaB03g13945' => 'bca', 'BcaB04g17123' => 'bca', 'BcaB04g17867' => 'bca', 'BcaB04g19839' => 'bca', 'BcaB07g30317' => 'bca', 'BcaB07g32432' => 'bca', 'BcaB07g33362' => 'bca', 'BcaB08g36611' => 'bca', 'BcaC01g00028' => 'bca', 'BcaC01g01356' => 'bca', 'BcaC01g02034' => 'bca', 'BcaC01g06051' => 'bca', 'BcaC03g16839' => 'bca', 'BcaC03g17176' => 'bca', 'BcaC05g26829' => 'bca', 'BcaC06g31490' => 'bca', 'BcaC06g35344' => 'bca', 'BcaC06g36570' => 'bca', 'BcaC07g37537' => 'bca', 'BcaC08g43491' => 'bca', 'BcaC08g43773' => 'bca', 'BcaNung00234' => 'bca', 'BcaNung01982' => 'bca', 'BcaNung03707' => 'bca', 'BcaNung06454' => 'bca', 'BolC2t10762H' => 'bol', 'BolC2t11191H' => 'bol', 'BolC3t14322H' => 'bol', 'BolC3t19747H' => 'bol', 'BolC3t21425H' => 'bol', 'BolC4t27800H' => 'bol', 'BolC5t31423H' => 'bol', 'BolC6t35951H' => 'bol', 'BolC6t36282H' => 'bol', 'BolC7t40678H' => 'bol', 'BolC7t40679H' => 'bol', 'BolC7t42222H' => 'bol', 'BolC7t43492H' => 'bol', 'BolC7t46785H' => 'bol', 'BolC8t47853H' => 'bol', 'BolC9t56805H' => 'bol', 'BraA02t08000Z' => 'bra', 'BraA02t08341Z' => 'bra', 'BraA03t10936Z' => 'bra', 'BraA03t15657Z' => 'bra', 'BraA04t18100Z' => 'bra', 'BraA05t20523Z' => 'bra', 'BraA06t23353Z' => 'bra', 'BraA06t27473Z' => 'bra', 'BraA06t27769Z' => 'bra', 'BraA07t28928Z' => 'bra', 'BraA08t32236Z' => 'bra', 'BraA08t32841Z' => 'bra', 'BraA08t34524Z' => 'bra', 'BraA09t38742Z' => 'bra', 'BraA09t39295Z' => 'bra', 'C02p47180' => 'bna', 'C02p50990' => 'bna', 'C03p19360' => 'bna', 'C03p74950' => 'bna', 'C03p91000' => 'bna', 'C04p63260' => 'bna', 'C05p27050' => 'bna', 'C06p08750' => 'bna', 'C06p11490' => 'bna', 'C07p02820' => 'bna', 'C07p17180' => 'bna', 'C07p29440' => 'bna', 'C07p63730' => 'bna', 'C09p39260' => 'bna', 'CAN.G1164.34' => 'can', 'CAN.G1164.39' => 'can', 'CAN.G1530.3' => 'can', 'CAN.G162.61' => 'can', 'CAN.G176.6' => 'can', 'CAN.G289.49' => 'can', 'CAN.G370.21' => 'can', 'CAN.G370.22' => 'can', 'CAN.G371.117' => 'can', 'CAN.G58.37' => 'can', 'CAN.G588.98' => 'can', 'CANSAT21G2266' => 'cansat', 'CANSAT25G2799' => 'cansat', 'CANSAT35G0862' => 'cansat', 'CANSAT35G1704' => 'cansat', 'CANSAT35G1760' => 'cansat', 'CANSAT56G3971' => 'cansat', 'CANSAT56G4116' => 'cansat', 'CANSAT80G1259' => 'cansat', 'CARHR027730' => 'chi', 'CARHR033880' => 'chi', 'CARHR043270' => 'chi', 'CARHR145330' => 'chi', 'CARHR145340' => 'chi', 'CARHR175570' => 'chi', 'CARHR181570' => 'chi', 'CARHR258470' => 'chi', 'CARHR260490' => 'chi', 'CARHR294220' => 'chi', 'Carub.0001s2668' => 'cru', 'Carub.0001s3257' => 'cru', 'Carub.0001s4220' => 'cru', 'Carub.0005s0179' => 'cru', 'Carub.0006s2807' => 'cru', 'Carub.0007s0039' => 'cru', 'Carub.0008s0169' => 'cru', 'Carub.0008s0636' => 'cru', 'Ca_00338_v3' => 'car', 'Ca_00542_v3' => 'car', 'Ca_01844_v3' => 'car', 'Ca_10611_v3' => 'car', 'Ca_13326_v3' => 'car', 'Ca_17944_v3' => 'car', 'Ca_18546_v3' => 'car', 'Ca_24219_v3' => 'car', 'Ca_29972_v3' => 'car', 'CBR_g3681' => 'cbr', 'CBR_g40021' => 'cbr', 'Cc01_g08140' => 'ccan', 'Cc02_g13410' => 'ccan', 'Cc02_g37480' => 'ccan', 'Cc05_g12030' => 'ccan', 'Cc09_g03370' => 'ccan', 'Cc09_g10300' => 'ccan', 'Cc10_g03530' => 'ccan', 'Cc10_g11380' => 'ccan', 'CDE01G0176' => 'cde', 'CDE02G0675' => 'cde', 'CDE02G0942' => 'cde', 'CDE02G1153' => 'cde', 'CDE02G4177' => 'cde', 'CDE04G2117' => 'cde', 'CDE04G2736' => 'cde', 'CDE08G1161' => 'cde', 'CDE09G1238' => 'cde', 'Cfa000467' => 'cfa', 'Cfa000947' => 'cfa', 'Cfa004969' => 'cfa', 'Cfa005284' => 'cfa', 'Cfa008993' => 'cfa', 'Cfa018187' => 'cfa', 'Cfa018454' => 'cfa', 'Cfa020585' => 'cfa', 'Ciclev10000424m.g' => 'ccl', 'Ciclev10003605m.g' => 'ccl', 'Ciclev10007828m.g' => 'ccl', 'Ciclev10014620m.g' => 'ccl', 'Ciclev10015169m.g' => 'ccl', 'Ciclev10018291m.g' => 'ccl', 'Ciclev10028256m.g' => 'ccl', 'Ciclev10033822m.g' => 'ccl', 'CiPaw.05G060300' => 'cil', 'CiPaw.05G085000' => 'cil', 'CiPaw.06G083700' => 'cil', 'CiPaw.06G120300' => 'cil', 'CiPaw.09G060500' => 'cil', 'CiPaw.09G123800' => 'cil', 'CiPaw.11G169700' => 'cil', 'CiPaw.12G118300' => 'cil', 'CiPaw.15G071000' => 'cil', 'CiPaw.15G081900' => 'cil', 'ClCG01G024610' => 'cla', 'ClCG03G006070' => 'cla', 'ClCG05G019250' => 'cla', 'ClCG09G009500' => 'cla', 'ClCG11G008200' => 'cla', 'ClCG11G018080' => 'cla', 'COL.COLO4_17373' => 'col', 'COL.COLO4_22994' => 'col', 'COL.COLO4_26389' => 'col', 'COL.COLO4_27170' => 'col', 'COL.COLO4_31074' => 'col', 'COL.COLO4_31465' => 'col', 'COL.COLO4_36438' => 'col', 'COL.COLO4_36439' => 'col', 'Cpa.g.c38781' => 'cpa', 'Cpa.g.sc128.12' => 'cpa', 'Cpa.g.sc166.7' => 'cpa', 'Cpa.g.sc166.8' => 'cpa', 'Cpa.g.sc20.111' => 'cpa', 'Cpa.g.sc27.31' => 'cpa', 'Cpa.g.sc64.36' => 'cpa', 'Cpa.g.sc64.37' => 'cpa', 'Cpa.g.sc66.49' => 'cpa', 'Cpa.g.sc80.64' => 'cpa', 'CsaV3_1G012320' => 'csa', 'CsaV3_2G008480' => 'csa', 'CsaV3_2G033450' => 'csa', 'CsaV3_3G044830' => 'csa', 'CsaV3_4G033710' => 'csa', 'CsaV3_6G051730' => 'csa', 'CsaV3_7G025350' => 'csa', 'CSS0001067' => 'camsi', 'CSS0005996' => 'camsi', 'CSS0006590' => 'camsi', 'CSS0009673' => 'camsi', 'CSS0010201' => 'camsi', 'CSS0010549' => 'camsi', 'CSS0011364' => 'camsi', 'CSS0014473' => 'camsi', 'CSS0014961' => 'camsi', 'CSS0020191' => 'camsi', 'CSS0021165' => 'camsi', 'CSS0022306' => 'camsi', 'CSS0030591' => 'camsi', 'CSS0030696' => 'camsi', 'CSS0032653' => 'camsi', 'CSS0037487' => 'camsi', 'CSS0041102' => 'camsi', 'CSS0041261' => 'camsi', 'CSS0046246' => 'camsi', 'CSS0049256' => 'camsi', 'DCAR_004075' => 'dca', 'DCAR_011538' => 'dca', 'DCAR_019553' => 'dca', 'DCAR_020952' => 'dca', 'DCAR_021739' => 'dca', 'DCAR_027407' => 'dca', 'DCAR_027913' => 'dca', 'DCAR_028066' => 'dca', 'Dinv05899' => 'din', 'Dinv07563' => 'din', 'Dinv08010' => 'din', 'Dinv14125' => 'din', 'Dinv20172' => 'din', 'Dinv30743' => 'din', 'Dinv31229' => 'din', 'Dinv34162' => 'din', 'Dinv36028' => 'din', 'Dinv39368' => 'din', 'Dinv40565' => 'din', 'Dinv41706' => 'din', 'Duzib052G0089' => 'dzi', 'Duzib116G0641' => 'dzi', 'Duzib132G0069' => 'dzi', 'Duzib132G1219' => 'dzi', 'Duzib147G0278' => 'dzi', 'Duzib160G0480' => 'dzi', 'Duzib170G0661' => 'dzi', 'Duzib177G0591' => 'dzi', 'Duzib187G1353' => 'dzi', 'Duzib192G0858' => 'dzi', 'Duzib192G0883' => 'dzi', 'Duzib213G0506' => 'dzi', 'Duzib235G0289' => 'dzi', 'Duzib251G0422' => 'dzi', 'ECA232G3898' => 'eca', 'ECA233G5950' => 'eca', 'ECA234G1699' => 'eca', 'ECA234G2421' => 'eca', 'ECA236G0426' => 'eca', 'ECA236G4331' => 'eca', 'ECA248G2573' => 'eca', 'EL10Ac1g00077' => 'bvu', 'EL10Ac1g01746' => 'bvu', 'EL10Ac2g03464' => 'bvu', 'EL10Ac4g08176' => 'bvu', 'EL10Ac7g17521' => 'bvu', 'EL10Ac8g20386' => 'bvu', 'EL10Ac9g21343' => 'bvu', 'EL10Ac9g22688' => 'bvu', 'Eucgr.B03434' => 'egr', 'Eucgr.D00618' => 'egr', 'Eucgr.E02395' => 'egr', 'Eucgr.F01129' => 'egr', 'Eucgr.F02622' => 'egr', 'Eucgr.F04207' => 'egr', 'FAN01G0570' => 'fan', 'FAN03G3351' => 'fan', 'FAN06G3702' => 'fan', 'FAN07G2149' => 'fan', 'FAN10G3758' => 'fan', 'FAN11G1170' => 'fan', 'FAN11G2050' => 'fan', 'FAN11G2724' => 'fan', 'FAN12G1700' => 'fan', 'FAN12G2028' => 'fan', 'FAN15G1160' => 'fan', 'FAN15G3063' => 'fan', 'FAN16G2540' => 'fan', 'FAN16G3077' => 'fan', 'FAN16G3624' => 'fan', 'FAN17G0221' => 'fan', 'FAN20G2492' => 'fan', 'FAN20G2905' => 'fan', 'FAN21G0548' => 'fan', 'FAN21G1300' => 'fan', 'FAN22G0077' => 'fan', 'FAN22G1315' => 'fan', 'FAN24G1280' => 'fan', 'FAN24G1445' => 'fan', 'FAN24G3527' => 'fan', 'FAN25G0464' => 'fan', 'FAN25G2885' => 'fan', 'FAN25G3270' => 'fan', 'FAN27G1101' => 'fan', 'FAN27G2846' => 'fan', 'FAN27G3524' => 'fan', 'FvH4_2g11770' => 'fve', 'FvH4_2g15630' => 'fve', 'FvH4_3g05570' => 'fve', 'FvH4_3g09110' => 'fve', 'FvH4_3g19940' => 'fve', 'FvH4_4g04821' => 'fve', 'FvH4_4g31480' => 'fve', 'FvH4_7g01740' => 'fve', 'Glyma.05G130400' => 'gma', 'Glyma.05G156400' => 'gma', 'Glyma.07G197000' => 'gma', 'Glyma.08G085151' => 'gma', 'Glyma.08G114500' => 'gma', 'Glyma.08G300400' => 'gma', 'Glyma.10G215800' => 'gma', 'Glyma.12G224400' => 'gma', 'Glyma.13G179300' => 'gma', 'Glyma.13G218151' => 'gma', 'Glyma.13G238800' => 'gma', 'Glyma.13G276900' => 'gma', 'Glyma.14G078200' => 'gma', 'Glyma.15G074500' => 'gma', 'Glyma.15G094100' => 'gma', 'Glyma.17G247200' => 'gma', 'Glyma.18G120100' => 'gma', 'Glyma.20G176000' => 'gma', 'Gohir.A01G063600' => 'ghi', 'Gohir.A01G170301' => 'ghi', 'Gohir.A02G060500' => 'ghi', 'Gohir.A05G133850' => 'ghi', 'Gohir.A05G161400' => 'ghi', 'Gohir.A06G012900' => 'ghi', 'Gohir.A06G035901' => 'ghi', 'Gohir.A06G127100' => 'ghi', 'Gohir.A06G210500' => 'ghi', 'Gohir.A08G008650' => 'ghi', 'Gohir.A09G072700' => 'ghi', 'Gohir.A09G088301' => 'ghi', 'Gohir.A10G040600' => 'ghi', 'Gohir.A12G036300' => 'ghi', 'Gohir.A12G143350' => 'ghi', 'Gohir.A12G165500' => 'ghi', 'Gohir.A13G145700' => 'ghi', 'Gohir.D01G050000' => 'ghi', 'Gohir.D01G051366' => 'ghi', 'Gohir.D01G161350' => 'ghi', 'Gohir.D02G065900' => 'ghi', 'Gohir.D05G164200' => 'ghi', 'Gohir.D05G355500' => 'ghi', 'Gohir.D06G010400' => 'ghi', 'Gohir.D06G111250' => 'ghi', 'Gohir.D06G132000' => 'ghi', 'Gohir.D06G210500' => 'ghi', 'Gohir.D07G165675' => 'ghi', 'Gohir.D08G062240' => 'ghi', 'Gohir.D08G086101' => 'ghi', 'Gohir.D08G138060' => 'ghi', 'Gohir.D09G072300' => 'ghi', 'Gohir.D10G041400' => 'ghi', 'Gohir.D11G191020' => 'ghi', 'Gohir.D11G212066' => 'ghi', 'Gohir.D12G036300' => 'ghi', 'Gohir.D12G168600' => 'ghi', 'Gohir.D13G150600' => 'ghi', 'Gorai.001G057300' => 'gra', 'Gorai.002G069900' => 'gra', 'Gorai.002G200000' => 'gra', 'Gorai.003G067600' => 'gra', 'Gorai.005G074800' => 'gra', 'Gorai.006G087300' => 'gra', 'Gorai.008G037500' => 'gra', 'Gorai.008G181400' => 'gra', 'Gorai.009G169400' => 'gra', 'Gorai.009G387900' => 'gra', 'Gorai.010G013300' => 'gra', 'Gorai.010G153800' => 'gra', 'Gorai.010G255800' => 'gra', 'Gorai.011G043700' => 'gra', 'Gorai.011G198900' => 'gra', 'Gorai.013G168400' => 'gra', 'GSVIVG01005212001' => 'vvi', 'GSVIVG01006163001' => 'vvi', 'GSVIVG01009625001' => 'vvi', 'GSVIVG01014338001' => 'vvi', 'GSVIVG01020005001' => 'vvi', 'GSVIVG01021450001' => 'vvi', 'GSVIVG01023975001' => 'vvi', 'GSVIVG01034490001' => 'vvi', 'HanXRQChr04g0112071' => 'han', 'HanXRQChr05g0131151' => 'han', 'HanXRQChr09g0262371' => 'han', 'HanXRQChr09g0268401' => 'han', 'HanXRQChr10g0279241' => 'han', 'HanXRQChr10g0297961' => 'han', 'HanXRQChr11g0326231' => 'han', 'HanXRQChr11g0328471' => 'han', 'HanXRQChr16g0507941' => 'han', 'HanXRQChr17g0560211' => 'han', 'Haze_02108' => 'cav', 'Haze_02428' => 'cav', 'Haze_05593' => 'cav', 'Haze_06448' => 'cav', 'Haze_09427' => 'cav', 'Haze_12022' => 'cav', 'Haze_17612' => 'cav', 'Haze_17928' => 'cav', 'Hma1.2p1_0032F.1_g019250' => 'hma', 'Hma1.2p1_0163F.1_g072690' => 'hma', 'Hma1.2p1_0265F.1_g106710' => 'hma', 'Hma1.2p1_0286F.1_g113970' => 'hma', 'Hma1.2p1_0363F.1_g136640' => 'hma', 'Hma1.2p1_0584F.1_g183470' => 'hma', 'Hma1.2p1_0885F.1_g232570' => 'hma', 'HPP92_006022' => 'vpl', 'HPP92_007320' => 'vpl', 'HPP92_011521' => 'vpl', 'HPP92_019387' => 'vpl', 'HPP92_024038' => 'vpl', 'Hund05891' => 'sun', 'Hund06450' => 'sun', 'Hund12053' => 'sun', 'Hund16800' => 'sun', 'Hund21222' => 'sun', 'Hund22896' => 'sun', 'Hund23746' => 'sun', 'Hund27083' => 'sun', 'Lalb_Chr02g0141831' => 'lal', 'Lalb_Chr02g0141841' => 'lal', 'Lalb_Chr05g0220411' => 'lal', 'Lalb_Chr06g0162081' => 'lal', 'Lalb_Chr09g0327651' => 'lal', 'Lalb_Chr13g0295051' => 'lal', 'Lalb_Chr15g0086801' => 'lal', 'Lalb_Chr16g0383781' => 'lal', 'Lalb_Chr16g0383791' => 'lal', 'Lalb_Chr18g0055441' => 'lal', 'Lalb_Chr18g0059611' => 'lal', 'Lalb_Chr20g0109661' => 'lal', 'Lalb_Chr20g0109831' => 'lal', 'Lalb_Chr20g0121871' => 'lal', 'Lalb_Chr22g0355361' => 'lal', 'Lalb_Chr25g0286371' => 'lal', 'Lj1A1187G43' => 'lonja', 'Lj1A1205T50' => 'lonja', 'Lj1A800G33' => 'lonja', 'Lj1C1187T7' => 'lonja', 'Lj1C843T11' => 'lonja', 'Lj1g0010940' => 'lja', 'Lj2A288T69' => 'lonja', 'Lj3g0024276' => 'lja', 'Lj4A47T76' => 'lonja', 'Lj4g0005805' => 'lja', 'Lj4g0006097' => 'lja', 'Lj4g0008528' => 'lja', 'Lj4g0024907' => 'lja', 'Lj5g0012472' => 'lja', 'Lj5g0018648' => 'lja', 'Lj6C789G1' => 'lonja', 'Lj6g0004000' => 'lja', 'Lj7A292G67' => 'lonja', 'Lj7A292T64' => 'lonja', 'Lj9A400T58' => 'lonja', 'Lsat_1_v5_gn_1_126181' => 'lsa', 'Lsat_1_v5_gn_4_123041' => 'lsa', 'Lsat_1_v5_gn_4_133620' => 'lsa', 'Lsat_1_v5_gn_4_53221' => 'lsa', 'Lsat_1_v5_gn_4_71961' => 'lsa', 'Lsat_1_v5_gn_7_105241' => 'lsa', 'Lsat_1_v5_gn_7_21361' => 'lsa', 'Lsat_1_v5_gn_7_28860' => 'lsa', 'Lsat_1_v5_gn_7_31260' => 'lsa', 'Lsat_1_v5_gn_8_52801' => 'lsa', 'Manes.02G191400' => 'mes', 'Manes.03G110100' => 'mes', 'Manes.04G071100' => 'mes', 'Manes.05G100500' => 'mes', 'Manes.05G164700' => 'mes', 'Manes.15G087000' => 'mes', 'Manes.15G121500' => 'mes', 'Manes.16G028300' => 'mes', 'Manes.17G046100' => 'mes', 'Manes.17G069800' => 'mes', 'Manes.18G100500' => 'mes', 'Mapoly0002s0109' => 'mpo', 'Mapoly0024s0007' => 'mpo', 'Mapoly0089s0032' => 'mpo', 'MBI04_g42241_MAGBIO' => 'mbi', 'MBI05_g11988_MAGBIO' => 'mbi', 'MBI05_g35452_MAGBIO' => 'mbi', 'MBI07_g30179_MAGBIO' => 'mbi', 'MBI07_g35859_MAGBIO' => 'mbi', 'MBI07_g35860_MAGBIO' => 'mbi', 'MBI07_g37166_MAGBIO' => 'mbi', 'MBI08_g18172_MAGBIO' => 'mbi', 'MBI09_g08441_MAGBIO' => 'mbi', 'MBI13_g01676_MAGBIO' => 'mbi', 'MBI14_g42955_MAGBIO' => 'mbi', 'MBI16_g13161_MAGBIO' => 'mbi', 'MBI17_g27204_MAGBIO' => 'mbi', 'MBI19_g21595_MAGBIO' => 'mbi', 'MD00G1148400' => 'mdo', 'MD02G1301200' => 'mdo', 'MD03G1227800' => 'mdo', 'MD05G1041100' => 'mdo', 'MD05G1124800' => 'mdo', 'MD05G1284000' => 'mdo', 'MD05G1338800' => 'mdo', 'MD05G1338900' => 'mdo', 'MD07G1022800' => 'mdo', 'MD10G1047500' => 'mdo', 'MD10G1127500' => 'mdo', 'MD10G1262300' => 'mdo', 'MD10G1293800' => 'mdo', 'MD16G1074300' => 'mdo', 'Medtr1g021670' => 'mtr', 'Medtr1g096320' => 'mtr', 'Medtr2g013690' => 'mtr', 'Medtr2g019450' => 'mtr', 'Medtr2g085170' => 'mtr', 'Medtr4g088785' => 'mtr', 'Medtr8g055930' => 'mtr', 'Medtr8g085850' => 'mtr', 'MELO3C002605.2' => 'cme', 'MELO3C003891.2' => 'cme', 'MELO3C004012.2' => 'cme', 'MELO3C007134.2' => 'cme', 'MELO3C008118.2' => 'cme', 'MELO3C016700.2' => 'cme', 'MELO3C024127.2' => 'cme', 'MELO3C033361.2' => 'cme', 'MELO3C033362.2' => 'cme', 'Migut.C00430' => 'egut', 'Migut.C01246' => 'egut', 'Migut.E00101' => 'egut', 'Migut.H01486' => 'egut', 'Migut.H01939' => 'egut', 'Migut.K00360' => 'egut', 'Migut.M00910' => 'egut', 'Migut.M01139' => 'egut', 'Migut.N02677' => 'egut', 'MSTRG.13252' => 'ama', 'MSTRG.14701' => 'ama', 'MSTRG.1521' => 'ama', 'MSTRG.15884' => 'ama', 'MSTRG.16242' => 'ama', 'MSTRG.22285' => 'ama', 'MSTRG.22444' => 'ama', 'MSTRG.2349' => 'ama', 'MSTRG.26308' => 'ama', 'MSTRG.28296' => 'ama', 'MSTRG.9895' => 'ama', 'Nitab4.5_0000110g0060' => 'nta', 'Nitab4.5_0000420g0130' => 'nta', 'Nitab4.5_0000422g0030' => 'nta', 'Nitab4.5_0000560g0180' => 'nta', 'Nitab4.5_0000703g0100' => 'nta', 'Nitab4.5_0000786g0200' => 'nta', 'Nitab4.5_0001336g0020' => 'nta', 'Nitab4.5_0001796g0030' => 'nta', 'Nitab4.5_0003348g0060' => 'nta', 'Nitab4.5_0003698g0040' => 'nta', 'Nitab4.5_0003942g0090' => 'nta', 'Nitab4.5_0004775g0070' => 'nta', 'Nitab4.5_0004864g0030' => 'nta', 'Nitab4.5_0005615g0020' => 'nta', 'Nitab4.5_0009288g0030' => 'nta', 'Nitab4.5_0009341g0010' => 'nta', 'Nitab4.5_0009535g0010' => 'nta', 'Nn1g03995' => 'nnu', 'Nn1g04100' => 'nnu', 'Nn1g06530' => 'nnu', 'Nn3g16404' => 'nnu', 'Nn3g17212' => 'nnu', 'Nn3g20776' => 'nnu', 'Nn3g21923' => 'nnu', 'Nn5g27737' => 'nnu', 'Nn5g29461' => 'nnu', 'Nn7g38355' => 'nnu', 'Nn8g39873' => 'nnu', 'Oeu000548.2' => 'oeu', 'Oeu004672.1' => 'oeu', 'Oeu015605.2' => 'oeu', 'Oeu016092.1' => 'oeu', 'Oeu017879.3' => 'oeu', 'Oeu024910.1' => 'oeu', 'Oeu028965.1' => 'oeu', 'Oeu031269.1' => 'oeu', 'Oeu031270.1' => 'oeu', 'Oeu032535.1' => 'oeu', 'Oeu034151.1' => 'oeu', 'Oeu034152.1' => 'oeu', 'Oeu034588.2' => 'oeu', 'Oeu050846.1' => 'oeu', 'Oeu050849.2' => 'oeu', 'Oeu051063.2' => 'oeu', 'Oeu052368.1' => 'oeu', 'Oeu052370.1' => 'oeu', 'Os01g0210400' => 'osa', 'Os01g0304300' => 'osa', 'Os01g0749100' => 'osa', 'Os02g0745800' => 'osa', 'Os03g0769050' => 'osa', 'Os05g0531500' => 'osa', 'Os06g0724300' => 'osa', 'Os11g0198100' => 'osa', 'Peaxi162Scf00069g01425' => 'pax', 'Peaxi162Scf00280g00811' => 'pax', 'Peaxi162Scf00310g00615' => 'pax', 'Peaxi162Scf00362g00542' => 'pax', 'Peaxi162Scf00461g00310' => 'pax', 'Peaxi162Scf00530g00118' => 'pax', 'Peaxi162Scf00541g00057' => 'pax', 'Peaxi162Scf00661g00017' => 'pax', 'Peaxi162Scf00926g00027' => 'pax', 'Peaxi162Scf01064g00263' => 'pax', 'Peaxi162Scf01211g00135' => 'pax', 'PGR004G2336' => 'pgr', 'PGR042G0327' => 'pgr', 'PGR042G1957' => 'pgr', 'PGR042G2003' => 'pgr', 'PGR042G3929' => 'pgr', 'PGR083G1137' => 'pgr', 'PGR083G1364' => 'pgr', 'PGSC0003DMG400003381' => 'stu', 'PGSC0003DMG400003417' => 'stu', 'PGSC0003DMG400008981' => 'stu', 'PGSC0003DMG400012417' => 'stu', 'PGSC0003DMG400012823' => 'stu', 'PGSC0003DMG400016885' => 'stu', 'PGSC0003DMG400022812' => 'stu', 'PGSC0003DMG400029726' => 'stu', 'PGSC0003DMG401009243' => 'stu', 'PGSC0003DMG401031505' => 'stu', 'PGSC0003DMG402031505' => 'stu', 'Phvul.001G017600' => 'pvu', 'Phvul.002G193500' => 'pvu', 'Phvul.002G228900' => 'pvu', 'Phvul.002G236800' => 'pvu', 'Phvul.003G049500' => 'pvu', 'Phvul.005G072000' => 'pvu', 'Phvul.006G164800' => 'pvu', 'Phvul.006G185100' => 'pvu', 'Phvul.007G090000' => 'pvu', 'Potri.001G399800' => 'ptr', 'Potri.002G149900' => 'ptr', 'Potri.004G044100' => 'ptr', 'Potri.004G177600' => 'ptr', 'Potri.009G138000' => 'ptr', 'Potri.010G094000' => 'ptr', 'Potri.011G053000' => 'ptr', 'Potri.011G119300' => 'ptr', 'Potri.013G113700' => 'ptr', 'Potri.018G107800' => 'ptr', 'Potri.019G084100' => 'ptr', 'Pp3c14_23720' => 'ppa', 'Pp3c16_6340' => 'ppa', 'Pp3c23_13420' => 'ppa', 'Pp3c24_2740' => 'ppa', 'Pp3c25_860' => 'ppa', 'Pp3c8_21750' => 'ppa', 'Prupe.1G273000' => 'ppe', 'Prupe.1G273700' => 'ppe', 'Prupe.1G274100' => 'ppe', 'Prupe.2G023300' => 'ppe', 'Prupe.4G048000' => 'ppe', 'Prupe.4G080400' => 'ppe', 'Prupe.4G181200' => 'ppe', 'Prupe.8G056900' => 'ppe', 'Prupe.8G168700' => 'ppe', 'Psat1g189080' => 'psa', 'Psat1g204760' => 'psa', 'Psat4g175560' => 'psa', 'Psat4g177720' => 'psa', 'Psat5g244240' => 'psa', 'Psat6g010720' => 'psa', 'Psat6g187200' => 'psa', 'Psat7g072040' => 'psa', 'PSO017G3501' => 'pso', 'PSO063G2148' => 'pso', 'PSO063G5608' => 'pso', 'PSO210G6392' => 'pso', 'PSO541G2319' => 'pso', 'PSO541G2836' => 'pso', 'PSO541G4012' => 'pso', 'PSO541G6253' => 'pso', 'PSO675G0580' => 'pso', 'PSO675G0856' => 'pso', 'PSO675G5635' => 'pso', 'PSO675G9157' => 'pso', 'PSO832G1660' => 'pso', 'PSO832G1969' => 'pso', 'QL02p007186' => 'qlo', 'QL02p033904' => 'qlo', 'QL03p064391' => 'qlo', 'QL05p040593' => 'qlo', 'QL05p058242' => 'qlo', 'QL08p021825' => 'qlo', 'QL11p004981' => 'qlo', 'RcHm_v2.0_Chr1g0318301' => 'rch', 'RcHm_v2.0_Chr4g0418501' => 'rch', 'RcHm_v2.0_Chr4g0439971' => 'rch', 'RcHm_v2.0_Chr5g0008541' => 'rch', 'RcHm_v2.0_Chr5g0014101' => 'rch', 'RcHm_v2.0_Chr5g0014131' => 'rch', 'RcHm_v2.0_Chr5g0033621' => 'rch', 'RcHm_v2.0_Chr6g0272041' => 'rch', 'RcHm_v2.0_Chr6g0278831' => 'rch', 'Rhsim02G0130400' => 'rsi', 'Rhsim02G0171100' => 'rsi', 'Rhsim05G0053000' => 'rsi', 'Rhsim05G0053100' => 'rsi', 'Rhsim06G0096500' => 'rsi', 'Rhsim06G0096600' => 'rsi', 'Rhsim06G0199100' => 'rsi', 'Rhsim12G0062300' => 'rsi', 'Rhsim12G0062800' => 'rsi', 'Sabra02G0118600' => 'sbr', 'Sabra04G0027300' => 'sbr', 'Sabra04G0119500' => 'sbr', 'Sabra08G0112500' => 'sbr', 'Sabra11G0036800' => 'sbr', 'Sabra11G0103800' => 'sbr', 'Sabra13G0096300' => 'sbr', 'Sabra16G0262300' => 'sbr', 'Sabra18G0091700' => 'sbr', 'Sabra19G0095400' => 'sbr', 'SalBow6G3080' => 'sbo', 'SalBow7G1157' => 'sbo', 'SalBow7G2123' => 'sbo', 'SalBow7G2285' => 'sbo', 'SalBow7G3537' => 'sbo', 'SalBow8G2947' => 'sbo', 'SalBow8G4463' => 'sbo', 'SalBow8G5466' => 'sbo', 'Sc01g0001750' => 'sci', 'Sc02g0006640' => 'sci', 'Sc02g0006670' => 'sci', 'Sc04g0008220' => 'sci', 'Sc05g0006190' => 'sci', 'Sc08g0002760' => 'sci', 'Sc17g0006170' => 'sci', 'Sc22g0002050' => 'sci', 'Sc23g0001190' => 'sci', 'Sc24g0000980' => 'sci', 'Sed0006245' => 'sed', 'Sed0007543' => 'sed', 'Sed0009411' => 'sed', 'Sed0010765' => 'sed', 'Sed0012944' => 'sed', 'Sed0014682' => 'sed', 'Sed0016174' => 'sed', 'Sed0016796' => 'sed', 'Sed0020317' => 'sed', 'Sed0021467' => 'sed', 'SEGI_01316' => 'sgi', 'SEGI_03374' => 'sgi', 'SEGI_16265' => 'sgi', 'SEGI_18569' => 'sgi', 'SEGI_20351' => 'sgi', 'SEGI_26395' => 'sgi', 'SEGI_29469' => 'sgi', 'SEGI_34771' => 'sgi', 'SEGI_36769' => 'sgi', 'SEGI_37139' => 'sgi', 'SGA_v2.0_scaffold100G29687' => 'sas', 'SGA_v2.0_scaffold118G32472' => 'sas', 'SGA_v2.0_scaffold14G07051' => 'sas', 'SGA_v2.0_scaffold183G39845' => 'sas', 'SGA_v2.0_scaffold1G00174' => 'sas', 'SGA_v2.0_scaffold22G09714' => 'sas', 'SGA_v2.0_scaffold333G48992' => 'sas', 'SGA_v2.0_scaffold46G17491' => 'sas', 'SGA_v2.0_scaffold49G18294' => 'sas', 'SGA_v2.0_scaffold63G21658' => 'sas', 'SHI01741' => 'shi', 'SHI05771' => 'shi', 'SHI18077' => 'shi', 'SHI20525' => 'shi', 'SHI20527' => 'shi', 'SHI20528' => 'shi', 'SMO172G0185' => 'smo', 'SMO198G0020' => 'smo', 'SMO351G0006' => 'smo', 'SMO356G0118' => 'smo', 'SMO358G0296' => 'smo', 'SMO367G0079' => 'smo', 'SMO367G1277' => 'smo', 'Solyc01g014220.3' => 'sly', 'Solyc01g111770.2' => 'sly', 'Solyc02g078180.3' => 'sly', 'Solyc03g006430.3' => 'sly', 'Solyc03g006456.1' => 'sly', 'Solyc03g079860.2' => 'sly', 'Solyc04g079770.3' => 'sly', 'Solyc05g007430.4' => 'sly', 'Solyc07g063150.3' => 'sly', 'Solyc08g016620.3' => 'sly', 'Solyc09g057590.3' => 'sly', 'Solyc09g057600.1' => 'sly', 'Solyc10g009050.3' => 'sly', 'Solyc11g017420.2' => 'sly', 'Sopen01g053810' => 'spe', 'Sopen02g023040' => 'spe', 'Sopen03g002440' => 'spe', 'Sopen04g033350' => 'spe', 'Sopen05g003310' => 'spe', 'Sopen07g004050' => 'spe', 'Sopen07g031340' => 'spe', 'Sopen08g006990' => 'spe', 'Sopen10g004830' => 'spe', 'Sopen11g009370' => 'spe', 'Sp1g24450' => 'spa', 'Sp1g29670' => 'spa', 'Sp1g39600' => 'spa', 'Sp2g11080' => 'spa', 'Sp2g13970' => 'spa', 'Sp4g16130' => 'spa', 'Sp6g13080' => 'spa', 'Sp7g37270' => 'spa', 'TAR371G0065' => 'tar', 'TAR376G0340' => 'tar', 'TAR376G0435' => 'tar', 'TAR381G0002' => 'tar', 'TAR381G1236' => 'tar', 'TAR624G0055' => 'tar', 'TAR624G0324' => 'tar', 'TAR624G0696' => 'tar', 'TAR624G0906' => 'tar', 'TAR625G0107' => 'tar', 'TAR626G0015' => 'tar', 'TAR626G1356' => 'tar', 'TAR627G0888' => 'tar', 'TAR628G0399' => 'tar', 'TAR628G1327' => 'tar', 'TAR629G2831' => 'tar', 'TAR629G2874' => 'tar', 'TAR633G1432' => 'tar', 'TAR633G2771' => 'tar', 'THA.LOC104803394' => 'tha', 'THA.LOC104805153' => 'tha', 'THA.LOC104806784' => 'tha', 'THA.LOC104810473' => 'tha', 'THA.LOC104813100' => 'tha', 'THA.LOC104814215' => 'tha', 'THA.LOC104815554' => 'tha', 'THA.LOC104820544' => 'tha', 'THA.LOC104824754' => 'tha', 'THA.LOC104827717' => 'tha', 'Thecc.02G031400' => 'tca', 'Thecc.02G055900' => 'tca', 'Thecc.02G350800' => 'tca', 'Thecc.06G150900' => 'tca', 'Thecc.06G186600' => 'tca', 'Thecc.07G089600' => 'tca', 'Thecc.08G020400' => 'tca', 'Thecc.08G182100' => 'tca', 'Thhalv10000873m.g' => 'esa', 'Thhalv10004185m.g' => 'esa', 'Thhalv10006981m.g' => 'esa', 'Thhalv10007204m.g' => 'esa', 'Thhalv10011374m.g' => 'esa', 'Thhalv10013482m.g' => 'esa', 'Thhalv10017801m.g' => 'esa', 'Thhalv10024983m.g' => 'esa', 'TPR.G12072' => 'tpr', 'TPR.G15769' => 'tpr', 'TPR.G16504' => 'tpr', 'TPR.G16506' => 'tpr', 'TPR.G24345' => 'tpr', 'TPR.G26666' => 'tpr', 'TPR.G27320' => 'tpr', 'TPR.G31819' => 'tpr', 'TPR.G38879' => 'tpr', 'TPR.G39015' => 'tpr', 'TPR.G8819' => 'tpr', 'TWI09G0924' => 'twi', 'TWI12G0811' => 'twi', 'TWI12G1294' => 'twi', 'TWI31G0150' => 'twi', 'TWI36G1262' => 'twi', 'TWI38G1287' => 'twi', 'TWI38G1633' => 'twi', 'TWI38G1982' => 'twi', 'TWI39G0116' => 'twi', 'TWI60G1011' => 'twi', 'TWI63G0171' => 'twi', 'TWI73G0839' => 'twi', 'TWI79G1511' => 'twi', 'unitig_0.g915' => 'ugi', 'unitig_0.g916' => 'ugi', 'unitig_21.g20219' => 'ugi', 'unitig_21.g20416' => 'ugi', 'unitig_578.g16132' => 'ugi', 'unitig_578.g16718' => 'ugi', 'unitig_62.g23481' => 'ugi', 'unitig_744.g24535' => 'ugi', 'unitig_749.g13525' => 'ugi', 'vmacro01248' => 'vma', 'vmacro02290' => 'vma', 'vmacro10946' => 'vma', 'vmacro11865' => 'vma', 'vmacro12493' => 'vma', 'vmacro17322' => 'vma', 'vmacro21599' => 'vma', 'vmacro23041' => 'vma', 'VMungo0251G0004' => 'vmu', 'VMungo0251G2639' => 'vmu', 'VMungo0251G2967' => 'vmu', 'VMungo0540G0864' => 'vmu', 'VMungo0540G1569' => 'vmu', 'VMungo0647G0317' => 'vmu', 'VMungo0720G1373' => 'vmu', 'VMungo0720G1508' => 'vmu', 'VMungo1080G0485' => 'vmu', 'VMungo1215G3177' => 'vmu', 'Zm00001eb112600' => 'zma', 'Zm00001eb120220' => 'zma', 'Zm00001eb153240' => 'zma', 'Zm00001eb168880' => 'zma', 'Zm00001eb213920' => 'zma', 'Zm00001eb228280' => 'zma', 'Zm00001eb254580' => 'zma', 'Zm00001eb272180' => 'zma', 'Zm00001eb293190' => 'zma', 'Zm00001eb322930' => 'zma', 'Zm00001eb353360' => 'zma', 'Zm00001eb353390' => 'zma', 'Zm00001eb353430' => 'zma', 'Zm00001eb353440' => 'zma', 'Zm00001eb353780' => 'zma' ) $gf_id = 'HOM05D000499' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000499' ) $data_identifier = 'HOM05D000499' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 29, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 12, 'amhyb' => (int) 8, 'aly' => (int) 12, 'aox' => (int) 9, 'arhy' => (int) 26, 'ath' => (int) 8, 'atr' => (int) 7, 'acertr' => (int) 10, 'cqu' => (int) 15, 'bca' => (int) 29, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 11, 'cansat' => (int) 8, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 9, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 8, 'cpa' => (int) 10, 'csa' => (int) 7, 'camsi' => (int) 20, 'dca' => (int) 8, 'din' => (int) 12, 'dzi' => (int) 14, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 6, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 38, 'gra' => (int) 16, 'vvi' => (int) 8, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 5, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 11, 'lja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 11, 'mpo' => (int) 3, 'mbi' => (int) 14, 'mdo' => (int) 14, 'mtr' => (int) 8, 'cme' => (int) 9, 'egut' => (int) 9, 'ama' => (int) 11, 'nta' => (int) 17, 'nnu' => (int) 11, 'oeu' => (int) 18, 'osa' => (int) 8, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 6, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 9, 'rsi' => (int) 9, 'sbr' => (int) 10, 'sbo' => (int) 8, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 10, 'sas' => (int) 10, 'shi' => (int) 6, 'smo' => (int) 7, 'sly' => (int) 14, 'spe' => (int) 10, 'spa' => (int) 8, 'tar' => (int) 19, 'tha' => (int) 10, 'tca' => (int) 8, 'esa' => (int) 8, 'tpr' => (int) 11, 'twi' => (int) 13, 'ugi' => (int) 9, 'vma' => (int) 8, 'vmu' => (int) 10, 'zma' => (int) 15 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb353780' $species_info = array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ) $local_species = 'mtr' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000499', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1066', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p29780' => 'bna', 'A02p33180' => 'bna', 'A03p16470' => 'bna', 'A03p66010' => 'bna', 'A04p25970' => 'bna', 'A06p01270' => 'bna', 'A06p46080' => 'bna', 'A07p11400' => 'bna', 'A08p01840' => 'bna', 'A08p08230' => 'bna', 'A08p25740' => 'bna', 'A09p32070' => 'bna', 'A09p37830' => 'bna', 'A09p42840' => 'bna', 'A09p42850' => 'bna', 'Aa31LG10G2060' => 'aar', 'Aa31LG2G7410' => 'aar', 'Aa31LG6G10200' => 'aar', 'Aa31LG6G16680' => 'aar', 'Aa31LG6G8470' => 'aar', 'Aa31LG9G12730' => 'aar', 'Aa31LG9G13680' => 'aar', 'Aa31LG9G14920' => 'aar', 'Aa31LG9G6650' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4977' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5467' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3254' => 'aag', 'Actinidia02578' => 'ach', 'Actinidia07693' => 'ach', 'Actinidia08413' => 'ach', 'Actinidia08414' => 'ach', 'Actinidia15289' => 'ach', 'Actinidia19871' => 'ach', 'Actinidia21475' => 'ach', 'Actinidia22576' => 'ach', 'Actinidia28327' => 'ach', 'Actinidia32491' => 'ach', 'Actinidia39463' => 'ach', 'Actinidia39571' => 'ach', 'Ah.01g013750' => 'amhyb', 'Ah.01g023210' => 'amhyb', 'Ah.04g164850' => 'amhyb', 'Ah.05g178060' => 'amhyb', 'Ah.07g204270' => 'amhyb', 'Ah.07g208480' => 'amhyb', 'Ah.09g237410' => 'amhyb', 'Ah.14g089460' => 'amhyb', 'AL1G41790' => 'aly', 'AL1G49050' => 'aly', 'AL1G53810' => 'aly', 'AL1G61400' => 'aly', 'AL4G18580' => 'aly', 'AL5G12510' => 'aly', 'AL5G12540' => 'aly', 'AL6G43230' => 'aly', 'AL7G10370' => 'aly', 'AL7G19250' => 'aly', 'AL8G12240' => 'aly', 'AL8G18540' => 'aly', 'Aqoxy1G02409' => 'aox', 'Aqoxy2G03993' => 'aox', 'Aqoxy3G03357' => 'aox', 'Aqoxy4G00785' => 'aox', 'Aqoxy5G02598' => 'aox', 'Aqoxy6G00132' => 'aox', 'Aqoxy7G01776' => 'aox', 'Aqoxy7G02316' => 'aox', 'Aqoxy7G03973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.12AFKW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B8730' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27IQR1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3F75VG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3RE0GA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41TCQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.527VTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FIR39' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5W8UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DA38EV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ63HS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H1I32C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HC27T5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4M8AP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7N3CZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9UVDZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LS1NQA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT1D4B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SKC4TM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCFV76' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF9Q1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQWD9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1ZM88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WE07RT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YCK7VH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJE6Q6' => 'arhy', 'AT1G28240' => 'ath', 'AT1G34550' => 'ath', 'AT1G53040' => 'ath', 'AT2G02910' => 'ath', 'AT4G09630' => 'ath', 'AT4G38500' => 'ath', 'AT5G42660' => 'ath', 'AT5G46220' => 'ath', 'ATR0152G026' => 'atr', 'ATR0564G343' => 'atr', 'ATR0706G151' => 'atr', 'ATR0733G207' => 'atr', 'ATR0751G234' => 'atr', 'ATR0807G048' => 'atr', 'ATR1091G084' => 'atr', 'Atru.chr10.1229' => 'acertr', 'Atru.chr10.1230' => 'acertr', 'Atru.chr10.1874' => 'acertr', 'Atru.chr11.1808' => 'acertr', 'Atru.chr13.1795' => 'acertr', 'Atru.chr13.570' => 'acertr', 'Atru.chr2.2608' => 'acertr', 'Atru.chr2.2609' => 'acertr', 'Atru.chr5.3428' => 'acertr', 'Atru.chr8.1171' => 'acertr', 'AUR62004651' => 'cqu', 'AUR62008675' => 'cqu', 'AUR62010014' => 'cqu', 'AUR62013004' => 'cqu', 'AUR62014825' => 'cqu', 'AUR62015015' => 'cqu', 'AUR62015151' => 'cqu', 'AUR62017020' => 'cqu', 'AUR62019422' => 'cqu', 'AUR62023570' => 'cqu', 'AUR62025571' => 'cqu', 'AUR62029098' => 'cqu', 'AUR62033863' => 'cqu', 'AUR62034296' => 'cqu', 'AUR62040075' => 'cqu', 'BcaB02g07334' => 'bca', 'BcaB02g10575' => 'bca', 'BcaB03g12119' => 'bca', 'BcaB03g12120' => 'bca', 'BcaB03g13945' => 'bca', 'BcaB04g17123' => 'bca', 'BcaB04g17867' => 'bca', 'BcaB04g19839' => 'bca', 'BcaB07g30317' => 'bca', 'BcaB07g32432' => 'bca', 'BcaB07g33362' => 'bca', 'BcaB08g36611' => 'bca', 'BcaC01g00028' => 'bca', 'BcaC01g01356' => 'bca', 'BcaC01g02034' => 'bca', 'BcaC01g06051' => 'bca', 'BcaC03g16839' => 'bca', 'BcaC03g17176' => 'bca', 'BcaC05g26829' => 'bca', 'BcaC06g31490' => 'bca', 'BcaC06g35344' => 'bca', 'BcaC06g36570' => 'bca', 'BcaC07g37537' => 'bca', 'BcaC08g43491' => 'bca', 'BcaC08g43773' => 'bca', 'BcaNung00234' => 'bca', 'BcaNung01982' => 'bca', 'BcaNung03707' => 'bca', 'BcaNung06454' => 'bca', 'BolC2t10762H' => 'bol', 'BolC2t11191H' => 'bol', 'BolC3t14322H' => 'bol', 'BolC3t19747H' => 'bol', 'BolC3t21425H' => 'bol', 'BolC4t27800H' => 'bol', 'BolC5t31423H' => 'bol', 'BolC6t35951H' => 'bol', 'BolC6t36282H' => 'bol', 'BolC7t40678H' => 'bol', 'BolC7t40679H' => 'bol', 'BolC7t42222H' => 'bol', 'BolC7t43492H' => 'bol', 'BolC7t46785H' => 'bol', 'BolC8t47853H' => 'bol', 'BolC9t56805H' => 'bol', 'BraA02t08000Z' => 'bra', 'BraA02t08341Z' => 'bra', 'BraA03t10936Z' => 'bra', 'BraA03t15657Z' => 'bra', 'BraA04t18100Z' => 'bra', 'BraA05t20523Z' => 'bra', 'BraA06t23353Z' => 'bra', 'BraA06t27473Z' => 'bra', 'BraA06t27769Z' => 'bra', 'BraA07t28928Z' => 'bra', 'BraA08t32236Z' => 'bra', 'BraA08t32841Z' => 'bra', 'BraA08t34524Z' => 'bra', 'BraA09t38742Z' => 'bra', 'BraA09t39295Z' => 'bra', 'C02p47180' => 'bna', 'C02p50990' => 'bna', 'C03p19360' => 'bna', 'C03p74950' => 'bna', 'C03p91000' => 'bna', 'C04p63260' => 'bna', 'C05p27050' => 'bna', 'C06p08750' => 'bna', 'C06p11490' => 'bna', 'C07p02820' => 'bna', 'C07p17180' => 'bna', 'C07p29440' => 'bna', 'C07p63730' => 'bna', 'C09p39260' => 'bna', 'CAN.G1164.34' => 'can', 'CAN.G1164.39' => 'can', 'CAN.G1530.3' => 'can', 'CAN.G162.61' => 'can', 'CAN.G176.6' => 'can', 'CAN.G289.49' => 'can', 'CAN.G370.21' => 'can', 'CAN.G370.22' => 'can', 'CAN.G371.117' => 'can', 'CAN.G58.37' => 'can', 'CAN.G588.98' => 'can', 'CANSAT21G2266' => 'cansat', 'CANSAT25G2799' => 'cansat', 'CANSAT35G0862' => 'cansat', 'CANSAT35G1704' => 'cansat', 'CANSAT35G1760' => 'cansat', 'CANSAT56G3971' => 'cansat', 'CANSAT56G4116' => 'cansat', 'CANSAT80G1259' => 'cansat', 'CARHR027730' => 'chi', 'CARHR033880' => 'chi', 'CARHR043270' => 'chi', 'CARHR145330' => 'chi', 'CARHR145340' => 'chi', 'CARHR175570' => 'chi', 'CARHR181570' => 'chi', 'CARHR258470' => 'chi', 'CARHR260490' => 'chi', 'CARHR294220' => 'chi', 'Carub.0001s2668' => 'cru', 'Carub.0001s3257' => 'cru', 'Carub.0001s4220' => 'cru', 'Carub.0005s0179' => 'cru', 'Carub.0006s2807' => 'cru', 'Carub.0007s0039' => 'cru', 'Carub.0008s0169' => 'cru', 'Carub.0008s0636' => 'cru', 'Ca_00338_v3' => 'car', 'Ca_00542_v3' => 'car', 'Ca_01844_v3' => 'car', 'Ca_10611_v3' => 'car', 'Ca_13326_v3' => 'car', 'Ca_17944_v3' => 'car', 'Ca_18546_v3' => 'car', 'Ca_24219_v3' => 'car', 'Ca_29972_v3' => 'car', 'CBR_g3681' => 'cbr', 'CBR_g40021' => 'cbr', 'Cc01_g08140' => 'ccan', 'Cc02_g13410' => 'ccan', 'Cc02_g37480' => 'ccan', 'Cc05_g12030' => 'ccan', 'Cc09_g03370' => 'ccan', 'Cc09_g10300' => 'ccan', 'Cc10_g03530' => 'ccan', 'Cc10_g11380' => 'ccan', 'CDE01G0176' => 'cde', 'CDE02G0675' => 'cde', 'CDE02G0942' => 'cde', 'CDE02G1153' => 'cde', 'CDE02G4177' => 'cde', 'CDE04G2117' => 'cde', 'CDE04G2736' => 'cde', 'CDE08G1161' => 'cde', 'CDE09G1238' => 'cde', 'Cfa000467' => 'cfa', 'Cfa000947' => 'cfa', 'Cfa004969' => 'cfa', 'Cfa005284' => 'cfa', 'Cfa008993' => 'cfa', 'Cfa018187' => 'cfa', 'Cfa018454' => 'cfa', 'Cfa020585' => 'cfa', 'Ciclev10000424m.g' => 'ccl', 'Ciclev10003605m.g' => 'ccl', 'Ciclev10007828m.g' => 'ccl', 'Ciclev10014620m.g' => 'ccl', 'Ciclev10015169m.g' => 'ccl', 'Ciclev10018291m.g' => 'ccl', 'Ciclev10028256m.g' => 'ccl', 'Ciclev10033822m.g' => 'ccl', 'CiPaw.05G060300' => 'cil', 'CiPaw.05G085000' => 'cil', 'CiPaw.06G083700' => 'cil', 'CiPaw.06G120300' => 'cil', 'CiPaw.09G060500' => 'cil', 'CiPaw.09G123800' => 'cil', 'CiPaw.11G169700' => 'cil', 'CiPaw.12G118300' => 'cil', 'CiPaw.15G071000' => 'cil', 'CiPaw.15G081900' => 'cil', 'ClCG01G024610' => 'cla', 'ClCG03G006070' => 'cla', 'ClCG05G019250' => 'cla', 'ClCG09G009500' => 'cla', 'ClCG11G008200' => 'cla', 'ClCG11G018080' => 'cla', 'COL.COLO4_17373' => 'col', 'COL.COLO4_22994' => 'col', 'COL.COLO4_26389' => 'col', 'COL.COLO4_27170' => 'col', 'COL.COLO4_31074' => 'col', 'COL.COLO4_31465' => 'col', 'COL.COLO4_36438' => 'col', 'COL.COLO4_36439' => 'col', 'Cpa.g.c38781' => 'cpa', 'Cpa.g.sc128.12' => 'cpa', 'Cpa.g.sc166.7' => 'cpa', 'Cpa.g.sc166.8' => 'cpa', 'Cpa.g.sc20.111' => 'cpa', 'Cpa.g.sc27.31' => 'cpa', 'Cpa.g.sc64.36' => 'cpa', 'Cpa.g.sc64.37' => 'cpa', 'Cpa.g.sc66.49' => 'cpa', 'Cpa.g.sc80.64' => 'cpa', 'CsaV3_1G012320' => 'csa', 'CsaV3_2G008480' => 'csa', 'CsaV3_2G033450' => 'csa', 'CsaV3_3G044830' => 'csa', 'CsaV3_4G033710' => 'csa', 'CsaV3_6G051730' => 'csa', 'CsaV3_7G025350' => 'csa', 'CSS0001067' => 'camsi', 'CSS0005996' => 'camsi', 'CSS0006590' => 'camsi', 'CSS0009673' => 'camsi', 'CSS0010201' => 'camsi', 'CSS0010549' => 'camsi', 'CSS0011364' => 'camsi', 'CSS0014473' => 'camsi', 'CSS0014961' => 'camsi', 'CSS0020191' => 'camsi', 'CSS0021165' => 'camsi', 'CSS0022306' => 'camsi', 'CSS0030591' => 'camsi', 'CSS0030696' => 'camsi', 'CSS0032653' => 'camsi', 'CSS0037487' => 'camsi', 'CSS0041102' => 'camsi', 'CSS0041261' => 'camsi', 'CSS0046246' => 'camsi', 'CSS0049256' => 'camsi', 'DCAR_004075' => 'dca', 'DCAR_011538' => 'dca', 'DCAR_019553' => 'dca', 'DCAR_020952' => 'dca', 'DCAR_021739' => 'dca', 'DCAR_027407' => 'dca', 'DCAR_027913' => 'dca', 'DCAR_028066' => 'dca', 'Dinv05899' => 'din', 'Dinv07563' => 'din', 'Dinv08010' => 'din', 'Dinv14125' => 'din', 'Dinv20172' => 'din', 'Dinv30743' => 'din', 'Dinv31229' => 'din', 'Dinv34162' => 'din', 'Dinv36028' => 'din', 'Dinv39368' => 'din', 'Dinv40565' => 'din', 'Dinv41706' => 'din', 'Duzib052G0089' => 'dzi', 'Duzib116G0641' => 'dzi', 'Duzib132G0069' => 'dzi', 'Duzib132G1219' => 'dzi', 'Duzib147G0278' => 'dzi', 'Duzib160G0480' => 'dzi', 'Duzib170G0661' => 'dzi', 'Duzib177G0591' => 'dzi', 'Duzib187G1353' => 'dzi', 'Duzib192G0858' => 'dzi', 'Duzib192G0883' => 'dzi', 'Duzib213G0506' => 'dzi', 'Duzib235G0289' => 'dzi', 'Duzib251G0422' => 'dzi', 'ECA232G3898' => 'eca', 'ECA233G5950' => 'eca', 'ECA234G1699' => 'eca', 'ECA234G2421' => 'eca', 'ECA236G0426' => 'eca', 'ECA236G4331' => 'eca', 'ECA248G2573' => 'eca', 'EL10Ac1g00077' => 'bvu', 'EL10Ac1g01746' => 'bvu', 'EL10Ac2g03464' => 'bvu', 'EL10Ac4g08176' => 'bvu', 'EL10Ac7g17521' => 'bvu', 'EL10Ac8g20386' => 'bvu', 'EL10Ac9g21343' => 'bvu', 'EL10Ac9g22688' => 'bvu', 'Eucgr.B03434' => 'egr', 'Eucgr.D00618' => 'egr', 'Eucgr.E02395' => 'egr', 'Eucgr.F01129' => 'egr', 'Eucgr.F02622' => 'egr', 'Eucgr.F04207' => 'egr', 'FAN01G0570' => 'fan', 'FAN03G3351' => 'fan', 'FAN06G3702' => 'fan', 'FAN07G2149' => 'fan', 'FAN10G3758' => 'fan', 'FAN11G1170' => 'fan', 'FAN11G2050' => 'fan', 'FAN11G2724' => 'fan', 'FAN12G1700' => 'fan', 'FAN12G2028' => 'fan', 'FAN15G1160' => 'fan', 'FAN15G3063' => 'fan', 'FAN16G2540' => 'fan', 'FAN16G3077' => 'fan', 'FAN16G3624' => 'fan', 'FAN17G0221' => 'fan', 'FAN20G2492' => 'fan', 'FAN20G2905' => 'fan', 'FAN21G0548' => 'fan', 'FAN21G1300' => 'fan', 'FAN22G0077' => 'fan', 'FAN22G1315' => 'fan', 'FAN24G1280' => 'fan', 'FAN24G1445' => 'fan', 'FAN24G3527' => 'fan', 'FAN25G0464' => 'fan', 'FAN25G2885' => 'fan', 'FAN25G3270' => 'fan', 'FAN27G1101' => 'fan', 'FAN27G2846' => 'fan', 'FAN27G3524' => 'fan', 'FvH4_2g11770' => 'fve', 'FvH4_2g15630' => 'fve', 'FvH4_3g05570' => 'fve', 'FvH4_3g09110' => 'fve', 'FvH4_3g19940' => 'fve', 'FvH4_4g04821' => 'fve', 'FvH4_4g31480' => 'fve', 'FvH4_7g01740' => 'fve', 'Glyma.05G130400' => 'gma', 'Glyma.05G156400' => 'gma', 'Glyma.07G197000' => 'gma', 'Glyma.08G085151' => 'gma', 'Glyma.08G114500' => 'gma', 'Glyma.08G300400' => 'gma', 'Glyma.10G215800' => 'gma', 'Glyma.12G224400' => 'gma', 'Glyma.13G179300' => 'gma', 'Glyma.13G218151' => 'gma', 'Glyma.13G238800' => 'gma', 'Glyma.13G276900' => 'gma', 'Glyma.14G078200' => 'gma', 'Glyma.15G074500' => 'gma', 'Glyma.15G094100' => 'gma', 'Glyma.17G247200' => 'gma', 'Glyma.18G120100' => 'gma', 'Glyma.20G176000' => 'gma', 'Gohir.A01G063600' => 'ghi', 'Gohir.A01G170301' => 'ghi', 'Gohir.A02G060500' => 'ghi', 'Gohir.A05G133850' => 'ghi', 'Gohir.A05G161400' => 'ghi', 'Gohir.A06G012900' => 'ghi', 'Gohir.A06G035901' => 'ghi', 'Gohir.A06G127100' => 'ghi', 'Gohir.A06G210500' => 'ghi', 'Gohir.A08G008650' => 'ghi', 'Gohir.A09G072700' => 'ghi', 'Gohir.A09G088301' => 'ghi', 'Gohir.A10G040600' => 'ghi', 'Gohir.A12G036300' => 'ghi', 'Gohir.A12G143350' => 'ghi', 'Gohir.A12G165500' => 'ghi', 'Gohir.A13G145700' => 'ghi', 'Gohir.D01G050000' => 'ghi', 'Gohir.D01G051366' => 'ghi', 'Gohir.D01G161350' => 'ghi', 'Gohir.D02G065900' => 'ghi', 'Gohir.D05G164200' => 'ghi', 'Gohir.D05G355500' => 'ghi', 'Gohir.D06G010400' => 'ghi', 'Gohir.D06G111250' => 'ghi', 'Gohir.D06G132000' => 'ghi', 'Gohir.D06G210500' => 'ghi', 'Gohir.D07G165675' => 'ghi', 'Gohir.D08G062240' => 'ghi', 'Gohir.D08G086101' => 'ghi', 'Gohir.D08G138060' => 'ghi', 'Gohir.D09G072300' => 'ghi', 'Gohir.D10G041400' => 'ghi', 'Gohir.D11G191020' => 'ghi', 'Gohir.D11G212066' => 'ghi', 'Gohir.D12G036300' => 'ghi', 'Gohir.D12G168600' => 'ghi', 'Gohir.D13G150600' => 'ghi', 'Gorai.001G057300' => 'gra', 'Gorai.002G069900' => 'gra', 'Gorai.002G200000' => 'gra', 'Gorai.003G067600' => 'gra', 'Gorai.005G074800' => 'gra', 'Gorai.006G087300' => 'gra', 'Gorai.008G037500' => 'gra', 'Gorai.008G181400' => 'gra', 'Gorai.009G169400' => 'gra', 'Gorai.009G387900' => 'gra', 'Gorai.010G013300' => 'gra', 'Gorai.010G153800' => 'gra', 'Gorai.010G255800' => 'gra', 'Gorai.011G043700' => 'gra', 'Gorai.011G198900' => 'gra', 'Gorai.013G168400' => 'gra', 'GSVIVG01005212001' => 'vvi', 'GSVIVG01006163001' => 'vvi', 'GSVIVG01009625001' => 'vvi', 'GSVIVG01014338001' => 'vvi', 'GSVIVG01020005001' => 'vvi', 'GSVIVG01021450001' => 'vvi', 'GSVIVG01023975001' => 'vvi', 'GSVIVG01034490001' => 'vvi', 'HanXRQChr04g0112071' => 'han', 'HanXRQChr05g0131151' => 'han', 'HanXRQChr09g0262371' => 'han', 'HanXRQChr09g0268401' => 'han', 'HanXRQChr10g0279241' => 'han', 'HanXRQChr10g0297961' => 'han', 'HanXRQChr11g0326231' => 'han', 'HanXRQChr11g0328471' => 'han', 'HanXRQChr16g0507941' => 'han', 'HanXRQChr17g0560211' => 'han', 'Haze_02108' => 'cav', 'Haze_02428' => 'cav', 'Haze_05593' => 'cav', 'Haze_06448' => 'cav', 'Haze_09427' => 'cav', 'Haze_12022' => 'cav', 'Haze_17612' => 'cav', 'Haze_17928' => 'cav', 'Hma1.2p1_0032F.1_g019250' => 'hma', 'Hma1.2p1_0163F.1_g072690' => 'hma', 'Hma1.2p1_0265F.1_g106710' => 'hma', 'Hma1.2p1_0286F.1_g113970' => 'hma', 'Hma1.2p1_0363F.1_g136640' => 'hma', 'Hma1.2p1_0584F.1_g183470' => 'hma', 'Hma1.2p1_0885F.1_g232570' => 'hma', 'HPP92_006022' => 'vpl', 'HPP92_007320' => 'vpl', 'HPP92_011521' => 'vpl', 'HPP92_019387' => 'vpl', 'HPP92_024038' => 'vpl', 'Hund05891' => 'sun', 'Hund06450' => 'sun', 'Hund12053' => 'sun', 'Hund16800' => 'sun', 'Hund21222' => 'sun', 'Hund22896' => 'sun', 'Hund23746' => 'sun', 'Hund27083' => 'sun', 'Lalb_Chr02g0141831' => 'lal', 'Lalb_Chr02g0141841' => 'lal', 'Lalb_Chr05g0220411' => 'lal', 'Lalb_Chr06g0162081' => 'lal', 'Lalb_Chr09g0327651' => 'lal', 'Lalb_Chr13g0295051' => 'lal', 'Lalb_Chr15g0086801' => 'lal', 'Lalb_Chr16g0383781' => 'lal', 'Lalb_Chr16g0383791' => 'lal', 'Lalb_Chr18g0055441' => 'lal', 'Lalb_Chr18g0059611' => 'lal', 'Lalb_Chr20g0109661' => 'lal', 'Lalb_Chr20g0109831' => 'lal', 'Lalb_Chr20g0121871' => 'lal', 'Lalb_Chr22g0355361' => 'lal', 'Lalb_Chr25g0286371' => 'lal', 'Lj1A1187G43' => 'lonja', 'Lj1A1205T50' => 'lonja', 'Lj1A800G33' => 'lonja', 'Lj1C1187T7' => 'lonja', 'Lj1C843T11' => 'lonja', 'Lj1g0010940' => 'lja', 'Lj2A288T69' => 'lonja', 'Lj3g0024276' => 'lja', 'Lj4A47T76' => 'lonja', 'Lj4g0005805' => 'lja', 'Lj4g0006097' => 'lja', 'Lj4g0008528' => 'lja', 'Lj4g0024907' => 'lja', 'Lj5g0012472' => 'lja', 'Lj5g0018648' => 'lja', 'Lj6C789G1' => 'lonja', 'Lj6g0004000' => 'lja', 'Lj7A292G67' => 'lonja', 'Lj7A292T64' => 'lonja', 'Lj9A400T58' => 'lonja', 'Lsat_1_v5_gn_1_126181' => 'lsa', 'Lsat_1_v5_gn_4_123041' => 'lsa', 'Lsat_1_v5_gn_4_133620' => 'lsa', 'Lsat_1_v5_gn_4_53221' => 'lsa', 'Lsat_1_v5_gn_4_71961' => 'lsa', 'Lsat_1_v5_gn_7_105241' => 'lsa', 'Lsat_1_v5_gn_7_21361' => 'lsa', 'Lsat_1_v5_gn_7_28860' => 'lsa', 'Lsat_1_v5_gn_7_31260' => 'lsa', 'Lsat_1_v5_gn_8_52801' => 'lsa', 'Manes.02G191400' => 'mes', 'Manes.03G110100' => 'mes', 'Manes.04G071100' => 'mes', 'Manes.05G100500' => 'mes', 'Manes.05G164700' => 'mes', 'Manes.15G087000' => 'mes', 'Manes.15G121500' => 'mes', 'Manes.16G028300' => 'mes', 'Manes.17G046100' => 'mes', 'Manes.17G069800' => 'mes', 'Manes.18G100500' => 'mes', 'Mapoly0002s0109' => 'mpo', 'Mapoly0024s0007' => 'mpo', 'Mapoly0089s0032' => 'mpo', 'MBI04_g42241_MAGBIO' => 'mbi', 'MBI05_g11988_MAGBIO' => 'mbi', 'MBI05_g35452_MAGBIO' => 'mbi', 'MBI07_g30179_MAGBIO' => 'mbi', 'MBI07_g35859_MAGBIO' => 'mbi', 'MBI07_g35860_MAGBIO' => 'mbi', 'MBI07_g37166_MAGBIO' => 'mbi', 'MBI08_g18172_MAGBIO' => 'mbi', 'MBI09_g08441_MAGBIO' => 'mbi', 'MBI13_g01676_MAGBIO' => 'mbi', 'MBI14_g42955_MAGBIO' => 'mbi', 'MBI16_g13161_MAGBIO' => 'mbi', 'MBI17_g27204_MAGBIO' => 'mbi', 'MBI19_g21595_MAGBIO' => 'mbi', 'MD00G1148400' => 'mdo', 'MD02G1301200' => 'mdo', 'MD03G1227800' => 'mdo', 'MD05G1041100' => 'mdo', 'MD05G1124800' => 'mdo', 'MD05G1284000' => 'mdo', 'MD05G1338800' => 'mdo', 'MD05G1338900' => 'mdo', 'MD07G1022800' => 'mdo', 'MD10G1047500' => 'mdo', 'MD10G1127500' => 'mdo', 'MD10G1262300' => 'mdo', 'MD10G1293800' => 'mdo', 'MD16G1074300' => 'mdo', 'Medtr1g021670' => 'mtr', 'Medtr1g096320' => 'mtr', 'Medtr2g013690' => 'mtr', 'Medtr2g019450' => 'mtr', 'Medtr2g085170' => 'mtr', 'Medtr4g088785' => 'mtr', 'Medtr8g055930' => 'mtr', 'Medtr8g085850' => 'mtr', 'MELO3C002605.2' => 'cme', 'MELO3C003891.2' => 'cme', 'MELO3C004012.2' => 'cme', 'MELO3C007134.2' => 'cme', 'MELO3C008118.2' => 'cme', 'MELO3C016700.2' => 'cme', 'MELO3C024127.2' => 'cme', 'MELO3C033361.2' => 'cme', 'MELO3C033362.2' => 'cme', 'Migut.C00430' => 'egut', 'Migut.C01246' => 'egut', 'Migut.E00101' => 'egut', 'Migut.H01486' => 'egut', 'Migut.H01939' => 'egut', 'Migut.K00360' => 'egut', 'Migut.M00910' => 'egut', 'Migut.M01139' => 'egut', 'Migut.N02677' => 'egut', 'MSTRG.13252' => 'ama', 'MSTRG.14701' => 'ama', 'MSTRG.1521' => 'ama', 'MSTRG.15884' => 'ama', 'MSTRG.16242' => 'ama', 'MSTRG.22285' => 'ama', 'MSTRG.22444' => 'ama', 'MSTRG.2349' => 'ama', 'MSTRG.26308' => 'ama', 'MSTRG.28296' => 'ama', 'MSTRG.9895' => 'ama', 'Nitab4.5_0000110g0060' => 'nta', 'Nitab4.5_0000420g0130' => 'nta', 'Nitab4.5_0000422g0030' => 'nta', 'Nitab4.5_0000560g0180' => 'nta', 'Nitab4.5_0000703g0100' => 'nta', 'Nitab4.5_0000786g0200' => 'nta', 'Nitab4.5_0001336g0020' => 'nta', 'Nitab4.5_0001796g0030' => 'nta', 'Nitab4.5_0003348g0060' => 'nta', 'Nitab4.5_0003698g0040' => 'nta', 'Nitab4.5_0003942g0090' => 'nta', 'Nitab4.5_0004775g0070' => 'nta', 'Nitab4.5_0004864g0030' => 'nta', 'Nitab4.5_0005615g0020' => 'nta', 'Nitab4.5_0009288g0030' => 'nta', 'Nitab4.5_0009341g0010' => 'nta', 'Nitab4.5_0009535g0010' => 'nta', 'Nn1g03995' => 'nnu', 'Nn1g04100' => 'nnu', 'Nn1g06530' => 'nnu', 'Nn3g16404' => 'nnu', 'Nn3g17212' => 'nnu', 'Nn3g20776' => 'nnu', 'Nn3g21923' => 'nnu', 'Nn5g27737' => 'nnu', 'Nn5g29461' => 'nnu', 'Nn7g38355' => 'nnu', 'Nn8g39873' => 'nnu', 'Oeu000548.2' => 'oeu', 'Oeu004672.1' => 'oeu', 'Oeu015605.2' => 'oeu', 'Oeu016092.1' => 'oeu', 'Oeu017879.3' => 'oeu', 'Oeu024910.1' => 'oeu', 'Oeu028965.1' => 'oeu', 'Oeu031269.1' => 'oeu', 'Oeu031270.1' => 'oeu', 'Oeu032535.1' => 'oeu', 'Oeu034151.1' => 'oeu', 'Oeu034152.1' => 'oeu', 'Oeu034588.2' => 'oeu', 'Oeu050846.1' => 'oeu', 'Oeu050849.2' => 'oeu', 'Oeu051063.2' => 'oeu', 'Oeu052368.1' => 'oeu', 'Oeu052370.1' => 'oeu', 'Os01g0210400' => 'osa', 'Os01g0304300' => 'osa', 'Os01g0749100' => 'osa', 'Os02g0745800' => 'osa', 'Os03g0769050' => 'osa', 'Os05g0531500' => 'osa', 'Os06g0724300' => 'osa', 'Os11g0198100' => 'osa', 'Peaxi162Scf00069g01425' => 'pax', 'Peaxi162Scf00280g00811' => 'pax', 'Peaxi162Scf00310g00615' => 'pax', 'Peaxi162Scf00362g00542' => 'pax', 'Peaxi162Scf00461g00310' => 'pax', 'Peaxi162Scf00530g00118' => 'pax', 'Peaxi162Scf00541g00057' => 'pax', 'Peaxi162Scf00661g00017' => 'pax', 'Peaxi162Scf00926g00027' => 'pax', 'Peaxi162Scf01064g00263' => 'pax', 'Peaxi162Scf01211g00135' => 'pax', 'PGR004G2336' => 'pgr', 'PGR042G0327' => 'pgr', 'PGR042G1957' => 'pgr', 'PGR042G2003' => 'pgr', 'PGR042G3929' => 'pgr', 'PGR083G1137' => 'pgr', 'PGR083G1364' => 'pgr', 'PGSC0003DMG400003381' => 'stu', 'PGSC0003DMG400003417' => 'stu', 'PGSC0003DMG400008981' => 'stu', 'PGSC0003DMG400012417' => 'stu', 'PGSC0003DMG400012823' => 'stu', 'PGSC0003DMG400016885' => 'stu', 'PGSC0003DMG400022812' => 'stu', 'PGSC0003DMG400029726' => 'stu', 'PGSC0003DMG401009243' => 'stu', 'PGSC0003DMG401031505' => 'stu', 'PGSC0003DMG402031505' => 'stu', 'Phvul.001G017600' => 'pvu', 'Phvul.002G193500' => 'pvu', 'Phvul.002G228900' => 'pvu', 'Phvul.002G236800' => 'pvu', 'Phvul.003G049500' => 'pvu', 'Phvul.005G072000' => 'pvu', 'Phvul.006G164800' => 'pvu', 'Phvul.006G185100' => 'pvu', 'Phvul.007G090000' => 'pvu', 'Potri.001G399800' => 'ptr', 'Potri.002G149900' => 'ptr', 'Potri.004G044100' => 'ptr', 'Potri.004G177600' => 'ptr', 'Potri.009G138000' => 'ptr', 'Potri.010G094000' => 'ptr', 'Potri.011G053000' => 'ptr', 'Potri.011G119300' => 'ptr', 'Potri.013G113700' => 'ptr', 'Potri.018G107800' => 'ptr', 'Potri.019G084100' => 'ptr', 'Pp3c14_23720' => 'ppa', 'Pp3c16_6340' => 'ppa', 'Pp3c23_13420' => 'ppa', 'Pp3c24_2740' => 'ppa', 'Pp3c25_860' => 'ppa', 'Pp3c8_21750' => 'ppa', 'Prupe.1G273000' => 'ppe', 'Prupe.1G273700' => 'ppe', 'Prupe.1G274100' => 'ppe', 'Prupe.2G023300' => 'ppe', 'Prupe.4G048000' => 'ppe', 'Prupe.4G080400' => 'ppe', 'Prupe.4G181200' => 'ppe', 'Prupe.8G056900' => 'ppe', 'Prupe.8G168700' => 'ppe', 'Psat1g189080' => 'psa', 'Psat1g204760' => 'psa', 'Psat4g175560' => 'psa', 'Psat4g177720' => 'psa', 'Psat5g244240' => 'psa', 'Psat6g010720' => 'psa', 'Psat6g187200' => 'psa', 'Psat7g072040' => 'psa', 'PSO017G3501' => 'pso', 'PSO063G2148' => 'pso', 'PSO063G5608' => 'pso', 'PSO210G6392' => 'pso', 'PSO541G2319' => 'pso', 'PSO541G2836' => 'pso', 'PSO541G4012' => 'pso', 'PSO541G6253' => 'pso', 'PSO675G0580' => 'pso', 'PSO675G0856' => 'pso', 'PSO675G5635' => 'pso', 'PSO675G9157' => 'pso', 'PSO832G1660' => 'pso', 'PSO832G1969' => 'pso', 'QL02p007186' => 'qlo', 'QL02p033904' => 'qlo', 'QL03p064391' => 'qlo', 'QL05p040593' => 'qlo', 'QL05p058242' => 'qlo', 'QL08p021825' => 'qlo', 'QL11p004981' => 'qlo', 'RcHm_v2.0_Chr1g0318301' => 'rch', 'RcHm_v2.0_Chr4g0418501' => 'rch', 'RcHm_v2.0_Chr4g0439971' => 'rch', 'RcHm_v2.0_Chr5g0008541' => 'rch', 'RcHm_v2.0_Chr5g0014101' => 'rch', 'RcHm_v2.0_Chr5g0014131' => 'rch', 'RcHm_v2.0_Chr5g0033621' => 'rch', 'RcHm_v2.0_Chr6g0272041' => 'rch', 'RcHm_v2.0_Chr6g0278831' => 'rch', 'Rhsim02G0130400' => 'rsi', 'Rhsim02G0171100' => 'rsi', 'Rhsim05G0053000' => 'rsi', 'Rhsim05G0053100' => 'rsi', 'Rhsim06G0096500' => 'rsi', 'Rhsim06G0096600' => 'rsi', 'Rhsim06G0199100' => 'rsi', 'Rhsim12G0062300' => 'rsi', 'Rhsim12G0062800' => 'rsi', 'Sabra02G0118600' => 'sbr', 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'Solyc03g079860.2' => 'sly', 'Solyc04g079770.3' => 'sly', 'Solyc05g007430.4' => 'sly', 'Solyc07g063150.3' => 'sly', 'Solyc08g016620.3' => 'sly', 'Solyc09g057590.3' => 'sly', 'Solyc09g057600.1' => 'sly', 'Solyc10g009050.3' => 'sly', 'Solyc11g017420.2' => 'sly', 'Sopen01g053810' => 'spe', 'Sopen02g023040' => 'spe', 'Sopen03g002440' => 'spe', 'Sopen04g033350' => 'spe', 'Sopen05g003310' => 'spe', 'Sopen07g004050' => 'spe', 'Sopen07g031340' => 'spe', 'Sopen08g006990' => 'spe', 'Sopen10g004830' => 'spe', 'Sopen11g009370' => 'spe', 'Sp1g24450' => 'spa', 'Sp1g29670' => 'spa', 'Sp1g39600' => 'spa', 'Sp2g11080' => 'spa', 'Sp2g13970' => 'spa', 'Sp4g16130' => 'spa', 'Sp6g13080' => 'spa', 'Sp7g37270' => 'spa', 'TAR371G0065' => 'tar', 'TAR376G0340' => 'tar', 'TAR376G0435' => 'tar', 'TAR381G0002' => 'tar', 'TAR381G1236' => 'tar', 'TAR624G0055' => 'tar', 'TAR624G0324' => 'tar', 'TAR624G0696' => 'tar', 'TAR624G0906' => 'tar', 'TAR625G0107' => 'tar', 'TAR626G0015' => 'tar', 'TAR626G1356' => 'tar', 'TAR627G0888' => 'tar', 'TAR628G0399' => 'tar', 'TAR628G1327' => 'tar', 'TAR629G2831' => 'tar', 'TAR629G2874' => 'tar', 'TAR633G1432' => 'tar', 'TAR633G2771' => 'tar', 'THA.LOC104803394' => 'tha', 'THA.LOC104805153' => 'tha', 'THA.LOC104806784' => 'tha', 'THA.LOC104810473' => 'tha', 'THA.LOC104813100' => 'tha', 'THA.LOC104814215' => 'tha', 'THA.LOC104815554' => 'tha', 'THA.LOC104820544' => 'tha', 'THA.LOC104824754' => 'tha', 'THA.LOC104827717' => 'tha', 'Thecc.02G031400' => 'tca', 'Thecc.02G055900' => 'tca', 'Thecc.02G350800' => 'tca', 'Thecc.06G150900' => 'tca', 'Thecc.06G186600' => 'tca', 'Thecc.07G089600' => 'tca', 'Thecc.08G020400' => 'tca', 'Thecc.08G182100' => 'tca', 'Thhalv10000873m.g' => 'esa', 'Thhalv10004185m.g' => 'esa', 'Thhalv10006981m.g' => 'esa', 'Thhalv10007204m.g' => 'esa', 'Thhalv10011374m.g' => 'esa', 'Thhalv10013482m.g' => 'esa', 'Thhalv10017801m.g' => 'esa', 'Thhalv10024983m.g' => 'esa', 'TPR.G12072' => 'tpr', 'TPR.G15769' => 'tpr', 'TPR.G16504' => 'tpr', 'TPR.G16506' => 'tpr', 'TPR.G24345' => 'tpr', 'TPR.G26666' => 'tpr', 'TPR.G27320' => 'tpr', 'TPR.G31819' => 'tpr', 'TPR.G38879' => 'tpr', 'TPR.G39015' => 'tpr', 'TPR.G8819' => 'tpr', 'TWI09G0924' => 'twi', 'TWI12G0811' => 'twi', 'TWI12G1294' => 'twi', 'TWI31G0150' => 'twi', 'TWI36G1262' => 'twi', 'TWI38G1287' => 'twi', 'TWI38G1633' => 'twi', 'TWI38G1982' => 'twi', 'TWI39G0116' => 'twi', 'TWI60G1011' => 'twi', 'TWI63G0171' => 'twi', 'TWI73G0839' => 'twi', 'TWI79G1511' => 'twi', 'unitig_0.g915' => 'ugi', 'unitig_0.g916' => 'ugi', 'unitig_21.g20219' => 'ugi', 'unitig_21.g20416' => 'ugi', 'unitig_578.g16132' => 'ugi', 'unitig_578.g16718' => 'ugi', 'unitig_62.g23481' => 'ugi', 'unitig_744.g24535' => 'ugi', 'unitig_749.g13525' => 'ugi', 'vmacro01248' => 'vma', 'vmacro02290' => 'vma', 'vmacro10946' => 'vma', 'vmacro11865' => 'vma', 'vmacro12493' => 'vma', 'vmacro17322' => 'vma', 'vmacro21599' => 'vma', 'vmacro23041' => 'vma', 'VMungo0251G0004' => 'vmu', 'VMungo0251G2639' => 'vmu', 'VMungo0251G2967' => 'vmu', 'VMungo0540G0864' => 'vmu', 'VMungo0540G1569' => 'vmu', 'VMungo0647G0317' => 'vmu', 'VMungo0720G1373' => 'vmu', 'VMungo0720G1508' => 'vmu', 'VMungo1080G0485' => 'vmu', 'VMungo1215G3177' => 'vmu', 'Zm00001eb112600' => 'zma', 'Zm00001eb120220' => 'zma', 'Zm00001eb153240' => 'zma', 'Zm00001eb168880' => 'zma', 'Zm00001eb213920' => 'zma', 'Zm00001eb228280' => 'zma', 'Zm00001eb254580' => 'zma', 'Zm00001eb272180' => 'zma', 'Zm00001eb293190' => 'zma', 'Zm00001eb322930' => 'zma', 'Zm00001eb353360' => 'zma', 'Zm00001eb353390' => 'zma', 'Zm00001eb353430' => 'zma', 'Zm00001eb353440' => 'zma', 'Zm00001eb353780' => 'zma' ), 'gf_id' => 'HOM05D000499', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000499' ), 'data_identifier' => 'HOM05D000499', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000499', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1066', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p29780' => 'bna', 'A02p33180' => 'bna', 'A03p16470' => 'bna', 'A03p66010' => 'bna', 'A04p25970' => 'bna', 'A06p01270' => 'bna', 'A06p46080' => 'bna', 'A07p11400' => 'bna', 'A08p01840' => 'bna', 'A08p08230' => 'bna', 'A08p25740' => 'bna', 'A09p32070' => 'bna', 'A09p37830' => 'bna', 'A09p42840' => 'bna', 'A09p42850' => 'bna', 'Aa31LG10G2060' => 'aar', 'Aa31LG2G7410' => 'aar', 'Aa31LG6G10200' => 'aar', 'Aa31LG6G16680' => 'aar', 'Aa31LG6G8470' => 'aar', 'Aa31LG9G12730' => 'aar', 'Aa31LG9G13680' => 'aar', 'Aa31LG9G14920' => 'aar', 'Aa31LG9G6650' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4977' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5467' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3254' => 'aag', 'Actinidia02578' => 'ach', 'Actinidia07693' => 'ach', 'Actinidia08413' => 'ach', 'Actinidia08414' => 'ach', 'Actinidia15289' => 'ach', 'Actinidia19871' => 'ach', 'Actinidia21475' => 'ach', 'Actinidia22576' => 'ach', 'Actinidia28327' => 'ach', 'Actinidia32491' => 'ach', 'Actinidia39463' => 'ach', 'Actinidia39571' => 'ach', 'Ah.01g013750' => 'amhyb', 'Ah.01g023210' => 'amhyb', 'Ah.04g164850' => 'amhyb', 'Ah.05g178060' => 'amhyb', 'Ah.07g204270' => 'amhyb', 'Ah.07g208480' => 'amhyb', 'Ah.09g237410' => 'amhyb', 'Ah.14g089460' => 'amhyb', 'AL1G41790' => 'aly', 'AL1G49050' => 'aly', 'AL1G53810' => 'aly', 'AL1G61400' => 'aly', 'AL4G18580' => 'aly', 'AL5G12510' => 'aly', 'AL5G12540' => 'aly', 'AL6G43230' => 'aly', 'AL7G10370' => 'aly', 'AL7G19250' => 'aly', 'AL8G12240' => 'aly', 'AL8G18540' => 'aly', 'Aqoxy1G02409' => 'aox', 'Aqoxy2G03993' => 'aox', 'Aqoxy3G03357' => 'aox', 'Aqoxy4G00785' => 'aox', 'Aqoxy5G02598' => 'aox', 'Aqoxy6G00132' => 'aox', 'Aqoxy7G01776' => 'aox', 'Aqoxy7G02316' => 'aox', 'Aqoxy7G03973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.12AFKW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B8730' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27IQR1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3F75VG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3RE0GA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41TCQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.527VTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FIR39' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5W8UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DA38EV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ63HS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H1I32C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HC27T5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4M8AP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7N3CZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9UVDZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LS1NQA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT1D4B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SKC4TM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCFV76' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF9Q1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQWD9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1ZM88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WE07RT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YCK7VH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJE6Q6' => 'arhy', 'AT1G28240' => 'ath', 'AT1G34550' => 'ath', 'AT1G53040' => 'ath', 'AT2G02910' => 'ath', 'AT4G09630' => 'ath', 'AT4G38500' => 'ath', 'AT5G42660' => 'ath', 'AT5G46220' => 'ath', 'ATR0152G026' => 'atr', 'ATR0564G343' => 'atr', 'ATR0706G151' => 'atr', 'ATR0733G207' => 'atr', 'ATR0751G234' => 'atr', 'ATR0807G048' => 'atr', 'ATR1091G084' => 'atr', 'Atru.chr10.1229' => 'acertr', 'Atru.chr10.1230' => 'acertr', 'Atru.chr10.1874' => 'acertr', 'Atru.chr11.1808' => 'acertr', 'Atru.chr13.1795' => 'acertr', 'Atru.chr13.570' => 'acertr', 'Atru.chr2.2608' => 'acertr', 'Atru.chr2.2609' => 'acertr', 'Atru.chr5.3428' => 'acertr', 'Atru.chr8.1171' => 'acertr', 'AUR62004651' => 'cqu', 'AUR62008675' => 'cqu', 'AUR62010014' => 'cqu', 'AUR62013004' => 'cqu', 'AUR62014825' => 'cqu', 'AUR62015015' => 'cqu', 'AUR62015151' => 'cqu', 'AUR62017020' => 'cqu', 'AUR62019422' => 'cqu', 'AUR62023570' => 'cqu', 'AUR62025571' => 'cqu', 'AUR62029098' => 'cqu', 'AUR62033863' => 'cqu', 'AUR62034296' => 'cqu', 'AUR62040075' => 'cqu', 'BcaB02g07334' => 'bca', 'BcaB02g10575' => 'bca', 'BcaB03g12119' => 'bca', 'BcaB03g12120' => 'bca', 'BcaB03g13945' => 'bca', 'BcaB04g17123' => 'bca', 'BcaB04g17867' => 'bca', 'BcaB04g19839' => 'bca', 'BcaB07g30317' => 'bca', 'BcaB07g32432' => 'bca', 'BcaB07g33362' => 'bca', 'BcaB08g36611' => 'bca', 'BcaC01g00028' => 'bca', 'BcaC01g01356' => 'bca', 'BcaC01g02034' => 'bca', 'BcaC01g06051' => 'bca', 'BcaC03g16839' => 'bca', 'BcaC03g17176' => 'bca', 'BcaC05g26829' => 'bca', 'BcaC06g31490' => 'bca', 'BcaC06g35344' => 'bca', 'BcaC06g36570' => 'bca', 'BcaC07g37537' => 'bca', 'BcaC08g43491' => 'bca', 'BcaC08g43773' => 'bca', 'BcaNung00234' => 'bca', 'BcaNung01982' => 'bca', 'BcaNung03707' => 'bca', 'BcaNung06454' => 'bca', 'BolC2t10762H' => 'bol', 'BolC2t11191H' => 'bol', 'BolC3t14322H' => 'bol', 'BolC3t19747H' => 'bol', 'BolC3t21425H' => 'bol', 'BolC4t27800H' => 'bol', 'BolC5t31423H' => 'bol', 'BolC6t35951H' => 'bol', 'BolC6t36282H' => 'bol', 'BolC7t40678H' => 'bol', 'BolC7t40679H' => 'bol', 'BolC7t42222H' => 'bol', 'BolC7t43492H' => 'bol', 'BolC7t46785H' => 'bol', 'BolC8t47853H' => 'bol', 'BolC9t56805H' => 'bol', 'BraA02t08000Z' => 'bra', 'BraA02t08341Z' => 'bra', 'BraA03t10936Z' => 'bra', 'BraA03t15657Z' => 'bra', 'BraA04t18100Z' => 'bra', 'BraA05t20523Z' => 'bra', 'BraA06t23353Z' => 'bra', 'BraA06t27473Z' => 'bra', 'BraA06t27769Z' => 'bra', 'BraA07t28928Z' => 'bra', 'BraA08t32236Z' => 'bra', 'BraA08t32841Z' => 'bra', 'BraA08t34524Z' => 'bra', 'BraA09t38742Z' => 'bra', 'BraA09t39295Z' => 'bra', 'C02p47180' => 'bna', 'C02p50990' => 'bna', 'C03p19360' => 'bna', 'C03p74950' => 'bna', 'C03p91000' => 'bna', 'C04p63260' => 'bna', 'C05p27050' => 'bna', 'C06p08750' => 'bna', 'C06p11490' => 'bna', 'C07p02820' => 'bna', 'C07p17180' => 'bna', 'C07p29440' => 'bna', 'C07p63730' => 'bna', 'C09p39260' => 'bna', 'CAN.G1164.34' => 'can', 'CAN.G1164.39' => 'can', 'CAN.G1530.3' => 'can', 'CAN.G162.61' => 'can', 'CAN.G176.6' => 'can', 'CAN.G289.49' => 'can', 'CAN.G370.21' => 'can', 'CAN.G370.22' => 'can', 'CAN.G371.117' => 'can', 'CAN.G58.37' => 'can', 'CAN.G588.98' => 'can', 'CANSAT21G2266' => 'cansat', 'CANSAT25G2799' => 'cansat', 'CANSAT35G0862' => 'cansat', 'CANSAT35G1704' => 'cansat', 'CANSAT35G1760' => 'cansat', 'CANSAT56G3971' => 'cansat', 'CANSAT56G4116' => 'cansat', 'CANSAT80G1259' => 'cansat', 'CARHR027730' => 'chi', 'CARHR033880' => 'chi', 'CARHR043270' => 'chi', 'CARHR145330' => 'chi', 'CARHR145340' => 'chi', 'CARHR175570' => 'chi', 'CARHR181570' => 'chi', 'CARHR258470' => 'chi', 'CARHR260490' => 'chi', 'CARHR294220' => 'chi', 'Carub.0001s2668' => 'cru', 'Carub.0001s3257' => 'cru', 'Carub.0001s4220' => 'cru', 'Carub.0005s0179' => 'cru', 'Carub.0006s2807' => 'cru', 'Carub.0007s0039' => 'cru', 'Carub.0008s0169' => 'cru', 'Carub.0008s0636' => 'cru', 'Ca_00338_v3' => 'car', 'Ca_00542_v3' => 'car', 'Ca_01844_v3' => 'car', 'Ca_10611_v3' => 'car', 'Ca_13326_v3' => 'car', 'Ca_17944_v3' => 'car', 'Ca_18546_v3' => 'car', 'Ca_24219_v3' => 'car', 'Ca_29972_v3' => 'car', 'CBR_g3681' => 'cbr', 'CBR_g40021' => 'cbr', 'Cc01_g08140' => 'ccan', 'Cc02_g13410' => 'ccan', 'Cc02_g37480' => 'ccan', 'Cc05_g12030' => 'ccan', 'Cc09_g03370' => 'ccan', 'Cc09_g10300' => 'ccan', 'Cc10_g03530' => 'ccan', 'Cc10_g11380' => 'ccan', 'CDE01G0176' => 'cde', 'CDE02G0675' => 'cde', 'CDE02G0942' => 'cde', 'CDE02G1153' => 'cde', 'CDE02G4177' => 'cde', 'CDE04G2117' => 'cde', 'CDE04G2736' => 'cde', 'CDE08G1161' => 'cde', 'CDE09G1238' => 'cde', 'Cfa000467' => 'cfa', 'Cfa000947' => 'cfa', 'Cfa004969' => 'cfa', 'Cfa005284' => 'cfa', 'Cfa008993' => 'cfa', 'Cfa018187' => 'cfa', 'Cfa018454' => 'cfa', 'Cfa020585' => 'cfa', 'Ciclev10000424m.g' => 'ccl', 'Ciclev10003605m.g' => 'ccl', 'Ciclev10007828m.g' => 'ccl', 'Ciclev10014620m.g' => 'ccl', 'Ciclev10015169m.g' => 'ccl', 'Ciclev10018291m.g' => 'ccl', 'Ciclev10028256m.g' => 'ccl', 'Ciclev10033822m.g' => 'ccl', 'CiPaw.05G060300' => 'cil', 'CiPaw.05G085000' => 'cil', 'CiPaw.06G083700' => 'cil', 'CiPaw.06G120300' => 'cil', 'CiPaw.09G060500' => 'cil', 'CiPaw.09G123800' => 'cil', 'CiPaw.11G169700' => 'cil', 'CiPaw.12G118300' => 'cil', 'CiPaw.15G071000' => 'cil', 'CiPaw.15G081900' => 'cil', 'ClCG01G024610' => 'cla', 'ClCG03G006070' => 'cla', 'ClCG05G019250' => 'cla', 'ClCG09G009500' => 'cla', 'ClCG11G008200' => 'cla', 'ClCG11G018080' => 'cla', 'COL.COLO4_17373' => 'col', 'COL.COLO4_22994' => 'col', 'COL.COLO4_26389' => 'col', 'COL.COLO4_27170' => 'col', 'COL.COLO4_31074' => 'col', 'COL.COLO4_31465' => 'col', 'COL.COLO4_36438' => 'col', 'COL.COLO4_36439' => 'col', 'Cpa.g.c38781' => 'cpa', 'Cpa.g.sc128.12' => 'cpa', 'Cpa.g.sc166.7' => 'cpa', 'Cpa.g.sc166.8' => 'cpa', 'Cpa.g.sc20.111' => 'cpa', 'Cpa.g.sc27.31' => 'cpa', 'Cpa.g.sc64.36' => 'cpa', 'Cpa.g.sc64.37' => 'cpa', 'Cpa.g.sc66.49' => 'cpa', 'Cpa.g.sc80.64' => 'cpa', 'CsaV3_1G012320' => 'csa', 'CsaV3_2G008480' => 'csa', 'CsaV3_2G033450' => 'csa', 'CsaV3_3G044830' => 'csa', 'CsaV3_4G033710' => 'csa', 'CsaV3_6G051730' => 'csa', 'CsaV3_7G025350' => 'csa', 'CSS0001067' => 'camsi', 'CSS0005996' => 'camsi', 'CSS0006590' => 'camsi', 'CSS0009673' => 'camsi', 'CSS0010201' => 'camsi', 'CSS0010549' => 'camsi', 'CSS0011364' => 'camsi', 'CSS0014473' => 'camsi', 'CSS0014961' => 'camsi', 'CSS0020191' => 'camsi', 'CSS0021165' => 'camsi', 'CSS0022306' => 'camsi', 'CSS0030591' => 'camsi', 'CSS0030696' => 'camsi', 'CSS0032653' => 'camsi', 'CSS0037487' => 'camsi', 'CSS0041102' => 'camsi', 'CSS0041261' => 'camsi', 'CSS0046246' => 'camsi', 'CSS0049256' => 'camsi', 'DCAR_004075' => 'dca', 'DCAR_011538' => 'dca', 'DCAR_019553' => 'dca', 'DCAR_020952' => 'dca', 'DCAR_021739' => 'dca', 'DCAR_027407' => 'dca', 'DCAR_027913' => 'dca', 'DCAR_028066' => 'dca', 'Dinv05899' => 'din', 'Dinv07563' => 'din', 'Dinv08010' => 'din', 'Dinv14125' => 'din', 'Dinv20172' => 'din', 'Dinv30743' => 'din', 'Dinv31229' => 'din', 'Dinv34162' => 'din', 'Dinv36028' => 'din', 'Dinv39368' => 'din', 'Dinv40565' => 'din', 'Dinv41706' => 'din', 'Duzib052G0089' => 'dzi', 'Duzib116G0641' => 'dzi', 'Duzib132G0069' => 'dzi', 'Duzib132G1219' => 'dzi', 'Duzib147G0278' => 'dzi', 'Duzib160G0480' => 'dzi', 'Duzib170G0661' => 'dzi', 'Duzib177G0591' => 'dzi', 'Duzib187G1353' => 'dzi', 'Duzib192G0858' => 'dzi', 'Duzib192G0883' => 'dzi', 'Duzib213G0506' => 'dzi', 'Duzib235G0289' => 'dzi', 'Duzib251G0422' => 'dzi', 'ECA232G3898' => 'eca', 'ECA233G5950' => 'eca', 'ECA234G1699' => 'eca', 'ECA234G2421' => 'eca', 'ECA236G0426' => 'eca', 'ECA236G4331' => 'eca', 'ECA248G2573' => 'eca', 'EL10Ac1g00077' => 'bvu', 'EL10Ac1g01746' => 'bvu', 'EL10Ac2g03464' => 'bvu', 'EL10Ac4g08176' => 'bvu', 'EL10Ac7g17521' => 'bvu', 'EL10Ac8g20386' => 'bvu', 'EL10Ac9g21343' => 'bvu', 'EL10Ac9g22688' => 'bvu', 'Eucgr.B03434' => 'egr', 'Eucgr.D00618' => 'egr', 'Eucgr.E02395' => 'egr', 'Eucgr.F01129' => 'egr', 'Eucgr.F02622' => 'egr', 'Eucgr.F04207' => 'egr', 'FAN01G0570' => 'fan', 'FAN03G3351' => 'fan', 'FAN06G3702' => 'fan', 'FAN07G2149' => 'fan', 'FAN10G3758' => 'fan', 'FAN11G1170' => 'fan', 'FAN11G2050' => 'fan', 'FAN11G2724' => 'fan', 'FAN12G1700' => 'fan', 'FAN12G2028' => 'fan', 'FAN15G1160' => 'fan', 'FAN15G3063' => 'fan', 'FAN16G2540' => 'fan', 'FAN16G3077' => 'fan', 'FAN16G3624' => 'fan', 'FAN17G0221' => 'fan', 'FAN20G2492' => 'fan', 'FAN20G2905' => 'fan', 'FAN21G0548' => 'fan', 'FAN21G1300' => 'fan', 'FAN22G0077' => 'fan', 'FAN22G1315' => 'fan', 'FAN24G1280' => 'fan', 'FAN24G1445' => 'fan', 'FAN24G3527' => 'fan', 'FAN25G0464' => 'fan', 'FAN25G2885' => 'fan', 'FAN25G3270' => 'fan', 'FAN27G1101' => 'fan', 'FAN27G2846' => 'fan', 'FAN27G3524' => 'fan', 'FvH4_2g11770' => 'fve', 'FvH4_2g15630' => 'fve', 'FvH4_3g05570' => 'fve', 'FvH4_3g09110' => 'fve', 'FvH4_3g19940' => 'fve', 'FvH4_4g04821' => 'fve', 'FvH4_4g31480' => 'fve', 'FvH4_7g01740' => 'fve', 'Glyma.05G130400' => 'gma', 'Glyma.05G156400' => 'gma', 'Glyma.07G197000' => 'gma', 'Glyma.08G085151' => 'gma', 'Glyma.08G114500' => 'gma', 'Glyma.08G300400' => 'gma', 'Glyma.10G215800' => 'gma', 'Glyma.12G224400' => 'gma', 'Glyma.13G179300' => 'gma', 'Glyma.13G218151' => 'gma', 'Glyma.13G238800' => 'gma', 'Glyma.13G276900' => 'gma', 'Glyma.14G078200' => 'gma', 'Glyma.15G074500' => 'gma', 'Glyma.15G094100' => 'gma', 'Glyma.17G247200' => 'gma', 'Glyma.18G120100' => 'gma', 'Glyma.20G176000' => 'gma', 'Gohir.A01G063600' => 'ghi', 'Gohir.A01G170301' => 'ghi', 'Gohir.A02G060500' => 'ghi', 'Gohir.A05G133850' => 'ghi', 'Gohir.A05G161400' => 'ghi', 'Gohir.A06G012900' => 'ghi', 'Gohir.A06G035901' => 'ghi', 'Gohir.A06G127100' => 'ghi', 'Gohir.A06G210500' => 'ghi', 'Gohir.A08G008650' => 'ghi', 'Gohir.A09G072700' => 'ghi', 'Gohir.A09G088301' => 'ghi', 'Gohir.A10G040600' => 'ghi', 'Gohir.A12G036300' => 'ghi', 'Gohir.A12G143350' => 'ghi', 'Gohir.A12G165500' => 'ghi', 'Gohir.A13G145700' => 'ghi', 'Gohir.D01G050000' => 'ghi', 'Gohir.D01G051366' => 'ghi', 'Gohir.D01G161350' => 'ghi', 'Gohir.D02G065900' => 'ghi', 'Gohir.D05G164200' => 'ghi', 'Gohir.D05G355500' => 'ghi', 'Gohir.D06G010400' => 'ghi', 'Gohir.D06G111250' => 'ghi', 'Gohir.D06G132000' => 'ghi', 'Gohir.D06G210500' => 'ghi', 'Gohir.D07G165675' => 'ghi', 'Gohir.D08G062240' => 'ghi', 'Gohir.D08G086101' => 'ghi', 'Gohir.D08G138060' => 'ghi', 'Gohir.D09G072300' => 'ghi', 'Gohir.D10G041400' => 'ghi', 'Gohir.D11G191020' => 'ghi', 'Gohir.D11G212066' => 'ghi', 'Gohir.D12G036300' => 'ghi', 'Gohir.D12G168600' => 'ghi', 'Gohir.D13G150600' => 'ghi', 'Gorai.001G057300' => 'gra', 'Gorai.002G069900' => 'gra', 'Gorai.002G200000' => 'gra', 'Gorai.003G067600' => 'gra', 'Gorai.005G074800' => 'gra', 'Gorai.006G087300' => 'gra', 'Gorai.008G037500' => 'gra', 'Gorai.008G181400' => 'gra', 'Gorai.009G169400' => 'gra', 'Gorai.009G387900' => 'gra', 'Gorai.010G013300' => 'gra', 'Gorai.010G153800' => 'gra', 'Gorai.010G255800' => 'gra', 'Gorai.011G043700' => 'gra', 'Gorai.011G198900' => 'gra', 'Gorai.013G168400' => 'gra', 'GSVIVG01005212001' => 'vvi', 'GSVIVG01006163001' => 'vvi', 'GSVIVG01009625001' => 'vvi', 'GSVIVG01014338001' => 'vvi', 'GSVIVG01020005001' => 'vvi', 'GSVIVG01021450001' => 'vvi', 'GSVIVG01023975001' => 'vvi', 'GSVIVG01034490001' => 'vvi', 'HanXRQChr04g0112071' => 'han', 'HanXRQChr05g0131151' => 'han', 'HanXRQChr09g0262371' => 'han', 'HanXRQChr09g0268401' => 'han', 'HanXRQChr10g0279241' => 'han', 'HanXRQChr10g0297961' => 'han', 'HanXRQChr11g0326231' => 'han', 'HanXRQChr11g0328471' => 'han', 'HanXRQChr16g0507941' => 'han', 'HanXRQChr17g0560211' => 'han', 'Haze_02108' => 'cav', 'Haze_02428' => 'cav', 'Haze_05593' => 'cav', 'Haze_06448' => 'cav', 'Haze_09427' => 'cav', 'Haze_12022' => 'cav', 'Haze_17612' => 'cav', 'Haze_17928' => 'cav', 'Hma1.2p1_0032F.1_g019250' => 'hma', 'Hma1.2p1_0163F.1_g072690' => 'hma', 'Hma1.2p1_0265F.1_g106710' => 'hma', 'Hma1.2p1_0286F.1_g113970' => 'hma', 'Hma1.2p1_0363F.1_g136640' => 'hma', 'Hma1.2p1_0584F.1_g183470' => 'hma', 'Hma1.2p1_0885F.1_g232570' => 'hma', 'HPP92_006022' => 'vpl', 'HPP92_007320' => 'vpl', 'HPP92_011521' => 'vpl', 'HPP92_019387' => 'vpl', 'HPP92_024038' => 'vpl', 'Hund05891' => 'sun', 'Hund06450' => 'sun', 'Hund12053' => 'sun', 'Hund16800' => 'sun', 'Hund21222' => 'sun', 'Hund22896' => 'sun', 'Hund23746' => 'sun', 'Hund27083' => 'sun', 'Lalb_Chr02g0141831' => 'lal', 'Lalb_Chr02g0141841' => 'lal', 'Lalb_Chr05g0220411' => 'lal', 'Lalb_Chr06g0162081' => 'lal', 'Lalb_Chr09g0327651' => 'lal', 'Lalb_Chr13g0295051' => 'lal', 'Lalb_Chr15g0086801' => 'lal', 'Lalb_Chr16g0383781' => 'lal', 'Lalb_Chr16g0383791' => 'lal', 'Lalb_Chr18g0055441' => 'lal', 'Lalb_Chr18g0059611' => 'lal', 'Lalb_Chr20g0109661' => 'lal', 'Lalb_Chr20g0109831' => 'lal', 'Lalb_Chr20g0121871' => 'lal', 'Lalb_Chr22g0355361' => 'lal', 'Lalb_Chr25g0286371' => 'lal', 'Lj1A1187G43' => 'lonja', 'Lj1A1205T50' => 'lonja', 'Lj1A800G33' => 'lonja', 'Lj1C1187T7' => 'lonja', 'Lj1C843T11' => 'lonja', 'Lj1g0010940' => 'lja', 'Lj2A288T69' => 'lonja', 'Lj3g0024276' => 'lja', 'Lj4A47T76' => 'lonja', 'Lj4g0005805' => 'lja', 'Lj4g0006097' => 'lja', 'Lj4g0008528' => 'lja', 'Lj4g0024907' => 'lja', 'Lj5g0012472' => 'lja', 'Lj5g0018648' => 'lja', 'Lj6C789G1' => 'lonja', 'Lj6g0004000' => 'lja', 'Lj7A292G67' => 'lonja', 'Lj7A292T64' => 'lonja', 'Lj9A400T58' => 'lonja', 'Lsat_1_v5_gn_1_126181' => 'lsa', 'Lsat_1_v5_gn_4_123041' => 'lsa', 'Lsat_1_v5_gn_4_133620' => 'lsa', 'Lsat_1_v5_gn_4_53221' => 'lsa', 'Lsat_1_v5_gn_4_71961' => 'lsa', 'Lsat_1_v5_gn_7_105241' => 'lsa', 'Lsat_1_v5_gn_7_21361' => 'lsa', 'Lsat_1_v5_gn_7_28860' => 'lsa', 'Lsat_1_v5_gn_7_31260' => 'lsa', 'Lsat_1_v5_gn_8_52801' => 'lsa', 'Manes.02G191400' => 'mes', 'Manes.03G110100' => 'mes', 'Manes.04G071100' => 'mes', 'Manes.05G100500' => 'mes', 'Manes.05G164700' => 'mes', 'Manes.15G087000' => 'mes', 'Manes.15G121500' => 'mes', 'Manes.16G028300' => 'mes', 'Manes.17G046100' => 'mes', 'Manes.17G069800' => 'mes', 'Manes.18G100500' => 'mes', 'Mapoly0002s0109' => 'mpo', 'Mapoly0024s0007' => 'mpo', 'Mapoly0089s0032' => 'mpo', 'MBI04_g42241_MAGBIO' => 'mbi', 'MBI05_g11988_MAGBIO' => 'mbi', 'MBI05_g35452_MAGBIO' => 'mbi', 'MBI07_g30179_MAGBIO' => 'mbi', 'MBI07_g35859_MAGBIO' => 'mbi', 'MBI07_g35860_MAGBIO' => 'mbi', 'MBI07_g37166_MAGBIO' => 'mbi', 'MBI08_g18172_MAGBIO' => 'mbi', 'MBI09_g08441_MAGBIO' => 'mbi', 'MBI13_g01676_MAGBIO' => 'mbi', 'MBI14_g42955_MAGBIO' => 'mbi', 'MBI16_g13161_MAGBIO' => 'mbi', 'MBI17_g27204_MAGBIO' => 'mbi', 'MBI19_g21595_MAGBIO' => 'mbi', 'MD00G1148400' => 'mdo', 'MD02G1301200' => 'mdo', 'MD03G1227800' => 'mdo', 'MD05G1041100' => 'mdo', 'MD05G1124800' => 'mdo', 'MD05G1284000' => 'mdo', 'MD05G1338800' => 'mdo', 'MD05G1338900' => 'mdo', 'MD07G1022800' => 'mdo', 'MD10G1047500' => 'mdo', 'MD10G1127500' => 'mdo', 'MD10G1262300' => 'mdo', 'MD10G1293800' => 'mdo', 'MD16G1074300' => 'mdo', 'Medtr1g021670' => 'mtr', 'Medtr1g096320' => 'mtr', 'Medtr2g013690' => 'mtr', 'Medtr2g019450' => 'mtr', 'Medtr2g085170' => 'mtr', 'Medtr4g088785' => 'mtr', 'Medtr8g055930' => 'mtr', 'Medtr8g085850' => 'mtr', 'MELO3C002605.2' => 'cme', 'MELO3C003891.2' => 'cme', 'MELO3C004012.2' => 'cme', 'MELO3C007134.2' => 'cme', 'MELO3C008118.2' => 'cme', 'MELO3C016700.2' => 'cme', 'MELO3C024127.2' => 'cme', 'MELO3C033361.2' => 'cme', 'MELO3C033362.2' => 'cme', 'Migut.C00430' => 'egut', 'Migut.C01246' => 'egut', 'Migut.E00101' => 'egut', 'Migut.H01486' => 'egut', 'Migut.H01939' => 'egut', 'Migut.K00360' => 'egut', 'Migut.M00910' => 'egut', 'Migut.M01139' => 'egut', 'Migut.N02677' => 'egut', 'MSTRG.13252' => 'ama', 'MSTRG.14701' => 'ama', 'MSTRG.1521' => 'ama', 'MSTRG.15884' => 'ama', 'MSTRG.16242' => 'ama', 'MSTRG.22285' => 'ama', 'MSTRG.22444' => 'ama', 'MSTRG.2349' => 'ama', 'MSTRG.26308' => 'ama', 'MSTRG.28296' => 'ama', 'MSTRG.9895' => 'ama', 'Nitab4.5_0000110g0060' => 'nta', 'Nitab4.5_0000420g0130' => 'nta', 'Nitab4.5_0000422g0030' => 'nta', 'Nitab4.5_0000560g0180' => 'nta', 'Nitab4.5_0000703g0100' => 'nta', 'Nitab4.5_0000786g0200' => 'nta', 'Nitab4.5_0001336g0020' => 'nta', 'Nitab4.5_0001796g0030' => 'nta', 'Nitab4.5_0003348g0060' => 'nta', 'Nitab4.5_0003698g0040' => 'nta', 'Nitab4.5_0003942g0090' => 'nta', 'Nitab4.5_0004775g0070' => 'nta', 'Nitab4.5_0004864g0030' => 'nta', 'Nitab4.5_0005615g0020' => 'nta', 'Nitab4.5_0009288g0030' => 'nta', 'Nitab4.5_0009341g0010' => 'nta', 'Nitab4.5_0009535g0010' => 'nta', 'Nn1g03995' => 'nnu', 'Nn1g04100' => 'nnu', 'Nn1g06530' => 'nnu', 'Nn3g16404' => 'nnu', 'Nn3g17212' => 'nnu', 'Nn3g20776' => 'nnu', 'Nn3g21923' => 'nnu', 'Nn5g27737' => 'nnu', 'Nn5g29461' => 'nnu', 'Nn7g38355' => 'nnu', 'Nn8g39873' => 'nnu', 'Oeu000548.2' => 'oeu', 'Oeu004672.1' => 'oeu', 'Oeu015605.2' => 'oeu', 'Oeu016092.1' => 'oeu', 'Oeu017879.3' => 'oeu', 'Oeu024910.1' => 'oeu', 'Oeu028965.1' => 'oeu', 'Oeu031269.1' => 'oeu', 'Oeu031270.1' => 'oeu', 'Oeu032535.1' => 'oeu', 'Oeu034151.1' => 'oeu', 'Oeu034152.1' => 'oeu', 'Oeu034588.2' => 'oeu', 'Oeu050846.1' => 'oeu', 'Oeu050849.2' => 'oeu', 'Oeu051063.2' => 'oeu', 'Oeu052368.1' => 'oeu', 'Oeu052370.1' => 'oeu', 'Os01g0210400' => 'osa', 'Os01g0304300' => 'osa', 'Os01g0749100' => 'osa', 'Os02g0745800' => 'osa', 'Os03g0769050' => 'osa', 'Os05g0531500' => 'osa', 'Os06g0724300' => 'osa', 'Os11g0198100' => 'osa', 'Peaxi162Scf00069g01425' => 'pax', 'Peaxi162Scf00280g00811' => 'pax', 'Peaxi162Scf00310g00615' => 'pax', 'Peaxi162Scf00362g00542' => 'pax', 'Peaxi162Scf00461g00310' => 'pax', 'Peaxi162Scf00530g00118' => 'pax', 'Peaxi162Scf00541g00057' => 'pax', 'Peaxi162Scf00661g00017' => 'pax', 'Peaxi162Scf00926g00027' => 'pax', 'Peaxi162Scf01064g00263' => 'pax', 'Peaxi162Scf01211g00135' => 'pax', 'PGR004G2336' => 'pgr', 'PGR042G0327' => 'pgr', 'PGR042G1957' => 'pgr', 'PGR042G2003' => 'pgr', 'PGR042G3929' => 'pgr', 'PGR083G1137' => 'pgr', 'PGR083G1364' => 'pgr', 'PGSC0003DMG400003381' => 'stu', 'PGSC0003DMG400003417' => 'stu', 'PGSC0003DMG400008981' => 'stu', 'PGSC0003DMG400012417' => 'stu', 'PGSC0003DMG400012823' => 'stu', 'PGSC0003DMG400016885' => 'stu', 'PGSC0003DMG400022812' => 'stu', 'PGSC0003DMG400029726' => 'stu', 'PGSC0003DMG401009243' => 'stu', 'PGSC0003DMG401031505' => 'stu', 'PGSC0003DMG402031505' => 'stu', 'Phvul.001G017600' => 'pvu', 'Phvul.002G193500' => 'pvu', 'Phvul.002G228900' => 'pvu', 'Phvul.002G236800' => 'pvu', 'Phvul.003G049500' => 'pvu', 'Phvul.005G072000' => 'pvu', 'Phvul.006G164800' => 'pvu', 'Phvul.006G185100' => 'pvu', 'Phvul.007G090000' => 'pvu', 'Potri.001G399800' => 'ptr', 'Potri.002G149900' => 'ptr', 'Potri.004G044100' => 'ptr', 'Potri.004G177600' => 'ptr', 'Potri.009G138000' => 'ptr', 'Potri.010G094000' => 'ptr', 'Potri.011G053000' => 'ptr', 'Potri.011G119300' => 'ptr', 'Potri.013G113700' => 'ptr', 'Potri.018G107800' => 'ptr', 'Potri.019G084100' => 'ptr', 'Pp3c14_23720' => 'ppa', 'Pp3c16_6340' => 'ppa', 'Pp3c23_13420' => 'ppa', 'Pp3c24_2740' => 'ppa', 'Pp3c25_860' => 'ppa', 'Pp3c8_21750' => 'ppa', 'Prupe.1G273000' => 'ppe', 'Prupe.1G273700' => 'ppe', 'Prupe.1G274100' => 'ppe', 'Prupe.2G023300' => 'ppe', 'Prupe.4G048000' => 'ppe', 'Prupe.4G080400' => 'ppe', 'Prupe.4G181200' => 'ppe', 'Prupe.8G056900' => 'ppe', 'Prupe.8G168700' => 'ppe', 'Psat1g189080' => 'psa', 'Psat1g204760' => 'psa', 'Psat4g175560' => 'psa', 'Psat4g177720' => 'psa', 'Psat5g244240' => 'psa', 'Psat6g010720' => 'psa', 'Psat6g187200' => 'psa', 'Psat7g072040' => 'psa', 'PSO017G3501' => 'pso', 'PSO063G2148' => 'pso', 'PSO063G5608' => 'pso', 'PSO210G6392' => 'pso', 'PSO541G2319' => 'pso', 'PSO541G2836' => 'pso', 'PSO541G4012' => 'pso', 'PSO541G6253' => 'pso', 'PSO675G0580' => 'pso', 'PSO675G0856' => 'pso', 'PSO675G5635' => 'pso', 'PSO675G9157' => 'pso', 'PSO832G1660' => 'pso', 'PSO832G1969' => 'pso', 'QL02p007186' => 'qlo', 'QL02p033904' => 'qlo', 'QL03p064391' => 'qlo', 'QL05p040593' => 'qlo', 'QL05p058242' => 'qlo', 'QL08p021825' => 'qlo', 'QL11p004981' => 'qlo', 'RcHm_v2.0_Chr1g0318301' => 'rch', 'RcHm_v2.0_Chr4g0418501' => 'rch', 'RcHm_v2.0_Chr4g0439971' => 'rch', 'RcHm_v2.0_Chr5g0008541' => 'rch', 'RcHm_v2.0_Chr5g0014101' => 'rch', 'RcHm_v2.0_Chr5g0014131' => 'rch', 'RcHm_v2.0_Chr5g0033621' => 'rch', 'RcHm_v2.0_Chr6g0272041' => 'rch', 'RcHm_v2.0_Chr6g0278831' => 'rch', 'Rhsim02G0130400' => 'rsi', 'Rhsim02G0171100' => 'rsi', 'Rhsim05G0053000' => 'rsi', 'Rhsim05G0053100' => 'rsi', 'Rhsim06G0096500' => 'rsi', 'Rhsim06G0096600' => 'rsi', 'Rhsim06G0199100' => 'rsi', 'Rhsim12G0062300' => 'rsi', 'Rhsim12G0062800' => 'rsi', 'Sabra02G0118600' => 'sbr', 'Sabra04G0027300' => 'sbr', 'Sabra04G0119500' => 'sbr', 'Sabra08G0112500' => 'sbr', 'Sabra11G0036800' => 'sbr', 'Sabra11G0103800' => 'sbr', 'Sabra13G0096300' => 'sbr', 'Sabra16G0262300' => 'sbr', 'Sabra18G0091700' => 'sbr', 'Sabra19G0095400' => 'sbr', 'SalBow6G3080' => 'sbo', 'SalBow7G1157' => 'sbo', 'SalBow7G2123' => 'sbo', 'SalBow7G2285' => 'sbo', 'SalBow7G3537' => 'sbo', 'SalBow8G2947' => 'sbo', 'SalBow8G4463' => 'sbo', 'SalBow8G5466' => 'sbo', 'Sc01g0001750' => 'sci', 'Sc02g0006640' => 'sci', 'Sc02g0006670' => 'sci', 'Sc04g0008220' => 'sci', 'Sc05g0006190' => 'sci', 'Sc08g0002760' => 'sci', 'Sc17g0006170' => 'sci', 'Sc22g0002050' => 'sci', 'Sc23g0001190' => 'sci', 'Sc24g0000980' => 'sci', 'Sed0006245' => 'sed', 'Sed0007543' => 'sed', 'Sed0009411' => 'sed', 'Sed0010765' => 'sed', 'Sed0012944' => 'sed', 'Sed0014682' => 'sed', 'Sed0016174' => 'sed', 'Sed0016796' => 'sed', 'Sed0020317' => 'sed', 'Sed0021467' => 'sed', 'SEGI_01316' => 'sgi', 'SEGI_03374' => 'sgi', 'SEGI_16265' => 'sgi', 'SEGI_18569' => 'sgi', 'SEGI_20351' => 'sgi', 'SEGI_26395' => 'sgi', 'SEGI_29469' => 'sgi', 'SEGI_34771' => 'sgi', 'SEGI_36769' => 'sgi', 'SEGI_37139' => 'sgi', 'SGA_v2.0_scaffold100G29687' => 'sas', 'SGA_v2.0_scaffold118G32472' => 'sas', 'SGA_v2.0_scaffold14G07051' => 'sas', 'SGA_v2.0_scaffold183G39845' => 'sas', 'SGA_v2.0_scaffold1G00174' => 'sas', 'SGA_v2.0_scaffold22G09714' => 'sas', 'SGA_v2.0_scaffold333G48992' => 'sas', 'SGA_v2.0_scaffold46G17491' => 'sas', 'SGA_v2.0_scaffold49G18294' => 'sas', 'SGA_v2.0_scaffold63G21658' => 'sas', 'SHI01741' => 'shi', 'SHI05771' => 'shi', 'SHI18077' => 'shi', 'SHI20525' => 'shi', 'SHI20527' => 'shi', 'SHI20528' => 'shi', 'SMO172G0185' => 'smo', 'SMO198G0020' => 'smo', 'SMO351G0006' => 'smo', 'SMO356G0118' => 'smo', 'SMO358G0296' => 'smo', 'SMO367G0079' => 'smo', 'SMO367G1277' => 'smo', 'Solyc01g014220.3' => 'sly', 'Solyc01g111770.2' => 'sly', 'Solyc02g078180.3' => 'sly', 'Solyc03g006430.3' => 'sly', 'Solyc03g006456.1' => 'sly', 'Solyc03g079860.2' => 'sly', 'Solyc04g079770.3' => 'sly', 'Solyc05g007430.4' => 'sly', 'Solyc07g063150.3' => 'sly', 'Solyc08g016620.3' => 'sly', 'Solyc09g057590.3' => 'sly', 'Solyc09g057600.1' => 'sly', 'Solyc10g009050.3' => 'sly', 'Solyc11g017420.2' => 'sly', 'Sopen01g053810' => 'spe', 'Sopen02g023040' => 'spe', 'Sopen03g002440' => 'spe', 'Sopen04g033350' => 'spe', 'Sopen05g003310' => 'spe', 'Sopen07g004050' => 'spe', 'Sopen07g031340' => 'spe', 'Sopen08g006990' => 'spe', 'Sopen10g004830' => 'spe', 'Sopen11g009370' => 'spe', 'Sp1g24450' => 'spa', 'Sp1g29670' => 'spa', 'Sp1g39600' => 'spa', 'Sp2g11080' => 'spa', 'Sp2g13970' => 'spa', 'Sp4g16130' => 'spa', 'Sp6g13080' => 'spa', 'Sp7g37270' => 'spa', 'TAR371G0065' => 'tar', 'TAR376G0340' => 'tar', 'TAR376G0435' => 'tar', 'TAR381G0002' => 'tar', 'TAR381G1236' => 'tar', 'TAR624G0055' => 'tar', 'TAR624G0324' => 'tar', 'TAR624G0696' => 'tar', 'TAR624G0906' => 'tar', 'TAR625G0107' => 'tar', 'TAR626G0015' => 'tar', 'TAR626G1356' => 'tar', 'TAR627G0888' => 'tar', 'TAR628G0399' => 'tar', 'TAR628G1327' => 'tar', 'TAR629G2831' => 'tar', 'TAR629G2874' => 'tar', 'TAR633G1432' => 'tar', 'TAR633G2771' => 'tar', 'THA.LOC104803394' => 'tha', 'THA.LOC104805153' => 'tha', 'THA.LOC104806784' => 'tha', 'THA.LOC104810473' => 'tha', 'THA.LOC104813100' => 'tha', 'THA.LOC104814215' => 'tha', 'THA.LOC104815554' => 'tha', 'THA.LOC104820544' => 'tha', 'THA.LOC104824754' => 'tha', 'THA.LOC104827717' => 'tha', 'Thecc.02G031400' => 'tca', 'Thecc.02G055900' => 'tca', 'Thecc.02G350800' => 'tca', 'Thecc.06G150900' => 'tca', 'Thecc.06G186600' => 'tca', 'Thecc.07G089600' => 'tca', 'Thecc.08G020400' => 'tca', 'Thecc.08G182100' => 'tca', 'Thhalv10000873m.g' => 'esa', 'Thhalv10004185m.g' => 'esa', 'Thhalv10006981m.g' => 'esa', 'Thhalv10007204m.g' => 'esa', 'Thhalv10011374m.g' => 'esa', 'Thhalv10013482m.g' => 'esa', 'Thhalv10017801m.g' => 'esa', 'Thhalv10024983m.g' => 'esa', 'TPR.G12072' => 'tpr', 'TPR.G15769' => 'tpr', 'TPR.G16504' => 'tpr', 'TPR.G16506' => 'tpr', 'TPR.G24345' => 'tpr', 'TPR.G26666' => 'tpr', 'TPR.G27320' => 'tpr', 'TPR.G31819' => 'tpr', 'TPR.G38879' => 'tpr', 'TPR.G39015' => 'tpr', 'TPR.G8819' => 'tpr', 'TWI09G0924' => 'twi', 'TWI12G0811' => 'twi', 'TWI12G1294' => 'twi', 'TWI31G0150' => 'twi', 'TWI36G1262' => 'twi', 'TWI38G1287' => 'twi', 'TWI38G1633' => 'twi', 'TWI38G1982' => 'twi', 'TWI39G0116' => 'twi', 'TWI60G1011' => 'twi', 'TWI63G0171' => 'twi', 'TWI73G0839' => 'twi', 'TWI79G1511' => 'twi', 'unitig_0.g915' => 'ugi', 'unitig_0.g916' => 'ugi', 'unitig_21.g20219' => 'ugi', 'unitig_21.g20416' => 'ugi', 'unitig_578.g16132' => 'ugi', 'unitig_578.g16718' => 'ugi', 'unitig_62.g23481' => 'ugi', 'unitig_744.g24535' => 'ugi', 'unitig_749.g13525' => 'ugi', 'vmacro01248' => 'vma', 'vmacro02290' => 'vma', 'vmacro10946' => 'vma', 'vmacro11865' => 'vma', 'vmacro12493' => 'vma', 'vmacro17322' => 'vma', 'vmacro21599' => 'vma', 'vmacro23041' => 'vma', 'VMungo0251G0004' => 'vmu', 'VMungo0251G2639' => 'vmu', 'VMungo0251G2967' => 'vmu', 'VMungo0540G0864' => 'vmu', 'VMungo0540G1569' => 'vmu', 'VMungo0647G0317' => 'vmu', 'VMungo0720G1373' => 'vmu', 'VMungo0720G1508' => 'vmu', 'VMungo1080G0485' => 'vmu', 'VMungo1215G3177' => 'vmu', 'Zm00001eb112600' => 'zma', 'Zm00001eb120220' => 'zma', 'Zm00001eb153240' => 'zma', 'Zm00001eb168880' => 'zma', 'Zm00001eb213920' => 'zma', 'Zm00001eb228280' => 'zma', 'Zm00001eb254580' => 'zma', 'Zm00001eb272180' => 'zma', 'Zm00001eb293190' => 'zma', 'Zm00001eb322930' => 'zma', 'Zm00001eb353360' => 'zma', 'Zm00001eb353390' => 'zma', 'Zm00001eb353430' => 'zma', 'Zm00001eb353440' => 'zma', 'Zm00001eb353780' => 'zma' ) $gf_id = 'HOM05D000499' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000499' ) $data_identifier = 'HOM05D000499' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 29, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 12, 'amhyb' => (int) 8, 'aly' => (int) 12, 'aox' => (int) 9, 'arhy' => (int) 26, 'ath' => (int) 8, 'atr' => (int) 7, 'acertr' => (int) 10, 'cqu' => (int) 15, 'bca' => (int) 29, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 11, 'cansat' => (int) 8, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 9, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 8, 'cpa' => (int) 10, 'csa' => (int) 7, 'camsi' => (int) 20, 'dca' => (int) 8, 'din' => (int) 12, 'dzi' => (int) 14, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 6, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 38, 'gra' => (int) 16, 'vvi' => (int) 8, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 5, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 11, 'lja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 11, 'mpo' => (int) 3, 'mbi' => (int) 14, 'mdo' => (int) 14, 'mtr' => (int) 8, 'cme' => (int) 9, 'egut' => (int) 9, 'ama' => (int) 11, 'nta' => (int) 17, 'nnu' => (int) 11, 'oeu' => (int) 18, 'osa' => (int) 8, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 6, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 9, 'rsi' => (int) 9, 'sbr' => (int) 10, 'sbo' => (int) 8, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 10, 'sas' => (int) 10, 'shi' => (int) 6, 'smo' => (int) 7, 'sly' => (int) 14, 'spe' => (int) 10, 'spa' => (int) 8, 'tar' => (int) 19, 'tha' => (int) 10, 'tca' => (int) 8, 'esa' => (int) 8, 'tpr' => (int) 11, 'twi' => (int) 13, 'ugi' => (int) 9, 'vma' => (int) 8, 'vmu' => (int) 10, 'zma' => (int) 15 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb353780' $species_info = array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ) $local_species = 'nnu' $disabled = '' $selected = '' $num_hits = (int) 0include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000499', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1066', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p29780' => 'bna', 'A02p33180' => 'bna', 'A03p16470' => 'bna', 'A03p66010' => 'bna', 'A04p25970' => 'bna', 'A06p01270' => 'bna', 'A06p46080' => 'bna', 'A07p11400' => 'bna', 'A08p01840' => 'bna', 'A08p08230' => 'bna', 'A08p25740' => 'bna', 'A09p32070' => 'bna', 'A09p37830' => 'bna', 'A09p42840' => 'bna', 'A09p42850' => 'bna', 'Aa31LG10G2060' => 'aar', 'Aa31LG2G7410' => 'aar', 'Aa31LG6G10200' => 'aar', 'Aa31LG6G16680' => 'aar', 'Aa31LG6G8470' => 'aar', 'Aa31LG9G12730' => 'aar', 'Aa31LG9G13680' => 'aar', 'Aa31LG9G14920' => 'aar', 'Aa31LG9G6650' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4977' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5467' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3254' => 'aag', 'Actinidia02578' => 'ach', 'Actinidia07693' => 'ach', 'Actinidia08413' => 'ach', 'Actinidia08414' => 'ach', 'Actinidia15289' => 'ach', 'Actinidia19871' => 'ach', 'Actinidia21475' => 'ach', 'Actinidia22576' => 'ach', 'Actinidia28327' => 'ach', 'Actinidia32491' => 'ach', 'Actinidia39463' => 'ach', 'Actinidia39571' => 'ach', 'Ah.01g013750' => 'amhyb', 'Ah.01g023210' => 'amhyb', 'Ah.04g164850' => 'amhyb', 'Ah.05g178060' => 'amhyb', 'Ah.07g204270' => 'amhyb', 'Ah.07g208480' => 'amhyb', 'Ah.09g237410' => 'amhyb', 'Ah.14g089460' => 'amhyb', 'AL1G41790' => 'aly', 'AL1G49050' => 'aly', 'AL1G53810' => 'aly', 'AL1G61400' => 'aly', 'AL4G18580' => 'aly', 'AL5G12510' => 'aly', 'AL5G12540' => 'aly', 'AL6G43230' => 'aly', 'AL7G10370' => 'aly', 'AL7G19250' => 'aly', 'AL8G12240' => 'aly', 'AL8G18540' => 'aly', 'Aqoxy1G02409' => 'aox', 'Aqoxy2G03993' => 'aox', 'Aqoxy3G03357' => 'aox', 'Aqoxy4G00785' => 'aox', 'Aqoxy5G02598' => 'aox', 'Aqoxy6G00132' => 'aox', 'Aqoxy7G01776' => 'aox', 'Aqoxy7G02316' => 'aox', 'Aqoxy7G03973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.12AFKW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B8730' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27IQR1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3F75VG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3RE0GA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41TCQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.527VTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FIR39' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5W8UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DA38EV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ63HS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H1I32C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HC27T5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4M8AP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7N3CZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9UVDZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LS1NQA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT1D4B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SKC4TM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCFV76' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF9Q1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQWD9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1ZM88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WE07RT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YCK7VH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJE6Q6' => 'arhy', 'AT1G28240' => 'ath', 'AT1G34550' => 'ath', 'AT1G53040' => 'ath', 'AT2G02910' => 'ath', 'AT4G09630' => 'ath', 'AT4G38500' => 'ath', 'AT5G42660' => 'ath', 'AT5G46220' => 'ath', 'ATR0152G026' => 'atr', 'ATR0564G343' => 'atr', 'ATR0706G151' => 'atr', 'ATR0733G207' => 'atr', 'ATR0751G234' => 'atr', 'ATR0807G048' => 'atr', 'ATR1091G084' => 'atr', 'Atru.chr10.1229' => 'acertr', 'Atru.chr10.1230' => 'acertr', 'Atru.chr10.1874' => 'acertr', 'Atru.chr11.1808' => 'acertr', 'Atru.chr13.1795' => 'acertr', 'Atru.chr13.570' => 'acertr', 'Atru.chr2.2608' => 'acertr', 'Atru.chr2.2609' => 'acertr', 'Atru.chr5.3428' => 'acertr', 'Atru.chr8.1171' => 'acertr', 'AUR62004651' => 'cqu', 'AUR62008675' => 'cqu', 'AUR62010014' => 'cqu', 'AUR62013004' => 'cqu', 'AUR62014825' => 'cqu', 'AUR62015015' => 'cqu', 'AUR62015151' => 'cqu', 'AUR62017020' => 'cqu', 'AUR62019422' => 'cqu', 'AUR62023570' => 'cqu', 'AUR62025571' => 'cqu', 'AUR62029098' => 'cqu', 'AUR62033863' => 'cqu', 'AUR62034296' => 'cqu', 'AUR62040075' => 'cqu', 'BcaB02g07334' => 'bca', 'BcaB02g10575' => 'bca', 'BcaB03g12119' => 'bca', 'BcaB03g12120' => 'bca', 'BcaB03g13945' => 'bca', 'BcaB04g17123' => 'bca', 'BcaB04g17867' => 'bca', 'BcaB04g19839' => 'bca', 'BcaB07g30317' => 'bca', 'BcaB07g32432' => 'bca', 'BcaB07g33362' => 'bca', 'BcaB08g36611' => 'bca', 'BcaC01g00028' => 'bca', 'BcaC01g01356' => 'bca', 'BcaC01g02034' => 'bca', 'BcaC01g06051' => 'bca', 'BcaC03g16839' => 'bca', 'BcaC03g17176' => 'bca', 'BcaC05g26829' => 'bca', 'BcaC06g31490' => 'bca', 'BcaC06g35344' => 'bca', 'BcaC06g36570' => 'bca', 'BcaC07g37537' => 'bca', 'BcaC08g43491' => 'bca', 'BcaC08g43773' => 'bca', 'BcaNung00234' => 'bca', 'BcaNung01982' => 'bca', 'BcaNung03707' => 'bca', 'BcaNung06454' => 'bca', 'BolC2t10762H' => 'bol', 'BolC2t11191H' => 'bol', 'BolC3t14322H' => 'bol', 'BolC3t19747H' => 'bol', 'BolC3t21425H' => 'bol', 'BolC4t27800H' => 'bol', 'BolC5t31423H' => 'bol', 'BolC6t35951H' => 'bol', 'BolC6t36282H' => 'bol', 'BolC7t40678H' => 'bol', 'BolC7t40679H' => 'bol', 'BolC7t42222H' => 'bol', 'BolC7t43492H' => 'bol', 'BolC7t46785H' => 'bol', 'BolC8t47853H' => 'bol', 'BolC9t56805H' => 'bol', 'BraA02t08000Z' => 'bra', 'BraA02t08341Z' => 'bra', 'BraA03t10936Z' => 'bra', 'BraA03t15657Z' => 'bra', 'BraA04t18100Z' => 'bra', 'BraA05t20523Z' => 'bra', 'BraA06t23353Z' => 'bra', 'BraA06t27473Z' => 'bra', 'BraA06t27769Z' => 'bra', 'BraA07t28928Z' => 'bra', 'BraA08t32236Z' => 'bra', 'BraA08t32841Z' => 'bra', 'BraA08t34524Z' => 'bra', 'BraA09t38742Z' => 'bra', 'BraA09t39295Z' => 'bra', 'C02p47180' => 'bna', 'C02p50990' => 'bna', 'C03p19360' => 'bna', 'C03p74950' => 'bna', 'C03p91000' => 'bna', 'C04p63260' => 'bna', 'C05p27050' => 'bna', 'C06p08750' => 'bna', 'C06p11490' => 'bna', 'C07p02820' => 'bna', 'C07p17180' => 'bna', 'C07p29440' => 'bna', 'C07p63730' => 'bna', 'C09p39260' => 'bna', 'CAN.G1164.34' => 'can', 'CAN.G1164.39' => 'can', 'CAN.G1530.3' => 'can', 'CAN.G162.61' => 'can', 'CAN.G176.6' => 'can', 'CAN.G289.49' => 'can', 'CAN.G370.21' => 'can', 'CAN.G370.22' => 'can', 'CAN.G371.117' => 'can', 'CAN.G58.37' => 'can', 'CAN.G588.98' => 'can', 'CANSAT21G2266' => 'cansat', 'CANSAT25G2799' => 'cansat', 'CANSAT35G0862' => 'cansat', 'CANSAT35G1704' => 'cansat', 'CANSAT35G1760' => 'cansat', 'CANSAT56G3971' => 'cansat', 'CANSAT56G4116' => 'cansat', 'CANSAT80G1259' => 'cansat', 'CARHR027730' => 'chi', 'CARHR033880' => 'chi', 'CARHR043270' => 'chi', 'CARHR145330' => 'chi', 'CARHR145340' => 'chi', 'CARHR175570' => 'chi', 'CARHR181570' => 'chi', 'CARHR258470' => 'chi', 'CARHR260490' => 'chi', 'CARHR294220' => 'chi', 'Carub.0001s2668' => 'cru', 'Carub.0001s3257' => 'cru', 'Carub.0001s4220' => 'cru', 'Carub.0005s0179' => 'cru', 'Carub.0006s2807' => 'cru', 'Carub.0007s0039' => 'cru', 'Carub.0008s0169' => 'cru', 'Carub.0008s0636' => 'cru', 'Ca_00338_v3' => 'car', 'Ca_00542_v3' => 'car', 'Ca_01844_v3' => 'car', 'Ca_10611_v3' => 'car', 'Ca_13326_v3' => 'car', 'Ca_17944_v3' => 'car', 'Ca_18546_v3' => 'car', 'Ca_24219_v3' => 'car', 'Ca_29972_v3' => 'car', 'CBR_g3681' => 'cbr', 'CBR_g40021' => 'cbr', 'Cc01_g08140' => 'ccan', 'Cc02_g13410' => 'ccan', 'Cc02_g37480' => 'ccan', 'Cc05_g12030' => 'ccan', 'Cc09_g03370' => 'ccan', 'Cc09_g10300' => 'ccan', 'Cc10_g03530' => 'ccan', 'Cc10_g11380' => 'ccan', 'CDE01G0176' => 'cde', 'CDE02G0675' => 'cde', 'CDE02G0942' => 'cde', 'CDE02G1153' => 'cde', 'CDE02G4177' => 'cde', 'CDE04G2117' => 'cde', 'CDE04G2736' => 'cde', 'CDE08G1161' => 'cde', 'CDE09G1238' => 'cde', 'Cfa000467' => 'cfa', 'Cfa000947' => 'cfa', 'Cfa004969' => 'cfa', 'Cfa005284' => 'cfa', 'Cfa008993' => 'cfa', 'Cfa018187' => 'cfa', 'Cfa018454' => 'cfa', 'Cfa020585' => 'cfa', 'Ciclev10000424m.g' => 'ccl', 'Ciclev10003605m.g' => 'ccl', 'Ciclev10007828m.g' => 'ccl', 'Ciclev10014620m.g' => 'ccl', 'Ciclev10015169m.g' => 'ccl', 'Ciclev10018291m.g' => 'ccl', 'Ciclev10028256m.g' => 'ccl', 'Ciclev10033822m.g' => 'ccl', 'CiPaw.05G060300' => 'cil', 'CiPaw.05G085000' => 'cil', 'CiPaw.06G083700' => 'cil', 'CiPaw.06G120300' => 'cil', 'CiPaw.09G060500' => 'cil', 'CiPaw.09G123800' => 'cil', 'CiPaw.11G169700' => 'cil', 'CiPaw.12G118300' => 'cil', 'CiPaw.15G071000' => 'cil', 'CiPaw.15G081900' => 'cil', 'ClCG01G024610' => 'cla', 'ClCG03G006070' => 'cla', 'ClCG05G019250' => 'cla', 'ClCG09G009500' => 'cla', 'ClCG11G008200' => 'cla', 'ClCG11G018080' => 'cla', 'COL.COLO4_17373' => 'col', 'COL.COLO4_22994' => 'col', 'COL.COLO4_26389' => 'col', 'COL.COLO4_27170' => 'col', 'COL.COLO4_31074' => 'col', 'COL.COLO4_31465' => 'col', 'COL.COLO4_36438' => 'col', 'COL.COLO4_36439' => 'col', 'Cpa.g.c38781' => 'cpa', 'Cpa.g.sc128.12' => 'cpa', 'Cpa.g.sc166.7' => 'cpa', 'Cpa.g.sc166.8' => 'cpa', 'Cpa.g.sc20.111' => 'cpa', 'Cpa.g.sc27.31' => 'cpa', 'Cpa.g.sc64.36' => 'cpa', 'Cpa.g.sc64.37' => 'cpa', 'Cpa.g.sc66.49' => 'cpa', 'Cpa.g.sc80.64' => 'cpa', 'CsaV3_1G012320' => 'csa', 'CsaV3_2G008480' => 'csa', 'CsaV3_2G033450' => 'csa', 'CsaV3_3G044830' => 'csa', 'CsaV3_4G033710' => 'csa', 'CsaV3_6G051730' => 'csa', 'CsaV3_7G025350' => 'csa', 'CSS0001067' => 'camsi', 'CSS0005996' => 'camsi', 'CSS0006590' => 'camsi', 'CSS0009673' => 'camsi', 'CSS0010201' => 'camsi', 'CSS0010549' => 'camsi', 'CSS0011364' => 'camsi', 'CSS0014473' => 'camsi', 'CSS0014961' => 'camsi', 'CSS0020191' => 'camsi', 'CSS0021165' => 'camsi', 'CSS0022306' => 'camsi', 'CSS0030591' => 'camsi', 'CSS0030696' => 'camsi', 'CSS0032653' => 'camsi', 'CSS0037487' => 'camsi', 'CSS0041102' => 'camsi', 'CSS0041261' => 'camsi', 'CSS0046246' => 'camsi', 'CSS0049256' => 'camsi', 'DCAR_004075' => 'dca', 'DCAR_011538' => 'dca', 'DCAR_019553' => 'dca', 'DCAR_020952' => 'dca', 'DCAR_021739' => 'dca', 'DCAR_027407' => 'dca', 'DCAR_027913' => 'dca', 'DCAR_028066' => 'dca', 'Dinv05899' => 'din', 'Dinv07563' => 'din', 'Dinv08010' => 'din', 'Dinv14125' => 'din', 'Dinv20172' => 'din', 'Dinv30743' => 'din', 'Dinv31229' => 'din', 'Dinv34162' => 'din', 'Dinv36028' => 'din', 'Dinv39368' => 'din', 'Dinv40565' => 'din', 'Dinv41706' => 'din', 'Duzib052G0089' => 'dzi', 'Duzib116G0641' => 'dzi', 'Duzib132G0069' => 'dzi', 'Duzib132G1219' => 'dzi', 'Duzib147G0278' => 'dzi', 'Duzib160G0480' => 'dzi', 'Duzib170G0661' => 'dzi', 'Duzib177G0591' => 'dzi', 'Duzib187G1353' => 'dzi', 'Duzib192G0858' => 'dzi', 'Duzib192G0883' => 'dzi', 'Duzib213G0506' => 'dzi', 'Duzib235G0289' => 'dzi', 'Duzib251G0422' => 'dzi', 'ECA232G3898' => 'eca', 'ECA233G5950' => 'eca', 'ECA234G1699' => 'eca', 'ECA234G2421' => 'eca', 'ECA236G0426' => 'eca', 'ECA236G4331' => 'eca', 'ECA248G2573' => 'eca', 'EL10Ac1g00077' => 'bvu', 'EL10Ac1g01746' => 'bvu', 'EL10Ac2g03464' => 'bvu', 'EL10Ac4g08176' => 'bvu', 'EL10Ac7g17521' => 'bvu', 'EL10Ac8g20386' => 'bvu', 'EL10Ac9g21343' => 'bvu', 'EL10Ac9g22688' => 'bvu', 'Eucgr.B03434' => 'egr', 'Eucgr.D00618' => 'egr', 'Eucgr.E02395' => 'egr', 'Eucgr.F01129' => 'egr', 'Eucgr.F02622' => 'egr', 'Eucgr.F04207' => 'egr', 'FAN01G0570' => 'fan', 'FAN03G3351' => 'fan', 'FAN06G3702' => 'fan', 'FAN07G2149' => 'fan', 'FAN10G3758' => 'fan', 'FAN11G1170' => 'fan', 'FAN11G2050' => 'fan', 'FAN11G2724' => 'fan', 'FAN12G1700' => 'fan', 'FAN12G2028' => 'fan', 'FAN15G1160' => 'fan', 'FAN15G3063' => 'fan', 'FAN16G2540' => 'fan', 'FAN16G3077' => 'fan', 'FAN16G3624' => 'fan', 'FAN17G0221' => 'fan', 'FAN20G2492' => 'fan', 'FAN20G2905' => 'fan', 'FAN21G0548' => 'fan', 'FAN21G1300' => 'fan', 'FAN22G0077' => 'fan', 'FAN22G1315' => 'fan', 'FAN24G1280' => 'fan', 'FAN24G1445' => 'fan', 'FAN24G3527' => 'fan', 'FAN25G0464' => 'fan', 'FAN25G2885' => 'fan', 'FAN25G3270' => 'fan', 'FAN27G1101' => 'fan', 'FAN27G2846' => 'fan', 'FAN27G3524' => 'fan', 'FvH4_2g11770' => 'fve', 'FvH4_2g15630' => 'fve', 'FvH4_3g05570' => 'fve', 'FvH4_3g09110' => 'fve', 'FvH4_3g19940' => 'fve', 'FvH4_4g04821' => 'fve', 'FvH4_4g31480' => 'fve', 'FvH4_7g01740' => 'fve', 'Glyma.05G130400' => 'gma', 'Glyma.05G156400' => 'gma', 'Glyma.07G197000' => 'gma', 'Glyma.08G085151' => 'gma', 'Glyma.08G114500' => 'gma', 'Glyma.08G300400' => 'gma', 'Glyma.10G215800' => 'gma', 'Glyma.12G224400' => 'gma', 'Glyma.13G179300' => 'gma', 'Glyma.13G218151' => 'gma', 'Glyma.13G238800' => 'gma', 'Glyma.13G276900' => 'gma', 'Glyma.14G078200' => 'gma', 'Glyma.15G074500' => 'gma', 'Glyma.15G094100' => 'gma', 'Glyma.17G247200' => 'gma', 'Glyma.18G120100' => 'gma', 'Glyma.20G176000' => 'gma', 'Gohir.A01G063600' => 'ghi', 'Gohir.A01G170301' => 'ghi', 'Gohir.A02G060500' => 'ghi', 'Gohir.A05G133850' => 'ghi', 'Gohir.A05G161400' => 'ghi', 'Gohir.A06G012900' => 'ghi', 'Gohir.A06G035901' => 'ghi', 'Gohir.A06G127100' => 'ghi', 'Gohir.A06G210500' => 'ghi', 'Gohir.A08G008650' => 'ghi', 'Gohir.A09G072700' => 'ghi', 'Gohir.A09G088301' => 'ghi', 'Gohir.A10G040600' => 'ghi', 'Gohir.A12G036300' => 'ghi', 'Gohir.A12G143350' => 'ghi', 'Gohir.A12G165500' => 'ghi', 'Gohir.A13G145700' => 'ghi', 'Gohir.D01G050000' => 'ghi', 'Gohir.D01G051366' => 'ghi', 'Gohir.D01G161350' => 'ghi', 'Gohir.D02G065900' => 'ghi', 'Gohir.D05G164200' => 'ghi', 'Gohir.D05G355500' => 'ghi', 'Gohir.D06G010400' => 'ghi', 'Gohir.D06G111250' => 'ghi', 'Gohir.D06G132000' => 'ghi', 'Gohir.D06G210500' => 'ghi', 'Gohir.D07G165675' => 'ghi', 'Gohir.D08G062240' => 'ghi', 'Gohir.D08G086101' => 'ghi', 'Gohir.D08G138060' => 'ghi', 'Gohir.D09G072300' => 'ghi', 'Gohir.D10G041400' => 'ghi', 'Gohir.D11G191020' => 'ghi', 'Gohir.D11G212066' => 'ghi', 'Gohir.D12G036300' => 'ghi', 'Gohir.D12G168600' => 'ghi', 'Gohir.D13G150600' => 'ghi', 'Gorai.001G057300' => 'gra', 'Gorai.002G069900' => 'gra', 'Gorai.002G200000' => 'gra', 'Gorai.003G067600' => 'gra', 'Gorai.005G074800' => 'gra', 'Gorai.006G087300' => 'gra', 'Gorai.008G037500' => 'gra', 'Gorai.008G181400' => 'gra', 'Gorai.009G169400' => 'gra', 'Gorai.009G387900' => 'gra', 'Gorai.010G013300' => 'gra', 'Gorai.010G153800' => 'gra', 'Gorai.010G255800' => 'gra', 'Gorai.011G043700' => 'gra', 'Gorai.011G198900' => 'gra', 'Gorai.013G168400' => 'gra', 'GSVIVG01005212001' => 'vvi', 'GSVIVG01006163001' => 'vvi', 'GSVIVG01009625001' => 'vvi', 'GSVIVG01014338001' => 'vvi', 'GSVIVG01020005001' => 'vvi', 'GSVIVG01021450001' => 'vvi', 'GSVIVG01023975001' => 'vvi', 'GSVIVG01034490001' => 'vvi', 'HanXRQChr04g0112071' => 'han', 'HanXRQChr05g0131151' => 'han', 'HanXRQChr09g0262371' => 'han', 'HanXRQChr09g0268401' => 'han', 'HanXRQChr10g0279241' => 'han', 'HanXRQChr10g0297961' => 'han', 'HanXRQChr11g0326231' => 'han', 'HanXRQChr11g0328471' => 'han', 'HanXRQChr16g0507941' => 'han', 'HanXRQChr17g0560211' => 'han', 'Haze_02108' => 'cav', 'Haze_02428' => 'cav', 'Haze_05593' => 'cav', 'Haze_06448' => 'cav', 'Haze_09427' => 'cav', 'Haze_12022' => 'cav', 'Haze_17612' => 'cav', 'Haze_17928' => 'cav', 'Hma1.2p1_0032F.1_g019250' => 'hma', 'Hma1.2p1_0163F.1_g072690' => 'hma', 'Hma1.2p1_0265F.1_g106710' => 'hma', 'Hma1.2p1_0286F.1_g113970' => 'hma', 'Hma1.2p1_0363F.1_g136640' => 'hma', 'Hma1.2p1_0584F.1_g183470' => 'hma', 'Hma1.2p1_0885F.1_g232570' => 'hma', 'HPP92_006022' => 'vpl', 'HPP92_007320' => 'vpl', 'HPP92_011521' => 'vpl', 'HPP92_019387' => 'vpl', 'HPP92_024038' => 'vpl', 'Hund05891' => 'sun', 'Hund06450' => 'sun', 'Hund12053' => 'sun', 'Hund16800' => 'sun', 'Hund21222' => 'sun', 'Hund22896' => 'sun', 'Hund23746' => 'sun', 'Hund27083' => 'sun', 'Lalb_Chr02g0141831' => 'lal', 'Lalb_Chr02g0141841' => 'lal', 'Lalb_Chr05g0220411' => 'lal', 'Lalb_Chr06g0162081' => 'lal', 'Lalb_Chr09g0327651' => 'lal', 'Lalb_Chr13g0295051' => 'lal', 'Lalb_Chr15g0086801' => 'lal', 'Lalb_Chr16g0383781' => 'lal', 'Lalb_Chr16g0383791' => 'lal', 'Lalb_Chr18g0055441' => 'lal', 'Lalb_Chr18g0059611' => 'lal', 'Lalb_Chr20g0109661' => 'lal', 'Lalb_Chr20g0109831' => 'lal', 'Lalb_Chr20g0121871' => 'lal', 'Lalb_Chr22g0355361' => 'lal', 'Lalb_Chr25g0286371' => 'lal', 'Lj1A1187G43' => 'lonja', 'Lj1A1205T50' => 'lonja', 'Lj1A800G33' => 'lonja', 'Lj1C1187T7' => 'lonja', 'Lj1C843T11' => 'lonja', 'Lj1g0010940' => 'lja', 'Lj2A288T69' => 'lonja', 'Lj3g0024276' => 'lja', 'Lj4A47T76' => 'lonja', 'Lj4g0005805' => 'lja', 'Lj4g0006097' => 'lja', 'Lj4g0008528' => 'lja', 'Lj4g0024907' => 'lja', 'Lj5g0012472' => 'lja', 'Lj5g0018648' => 'lja', 'Lj6C789G1' => 'lonja', 'Lj6g0004000' => 'lja', 'Lj7A292G67' => 'lonja', 'Lj7A292T64' => 'lonja', 'Lj9A400T58' => 'lonja', 'Lsat_1_v5_gn_1_126181' => 'lsa', 'Lsat_1_v5_gn_4_123041' => 'lsa', 'Lsat_1_v5_gn_4_133620' => 'lsa', 'Lsat_1_v5_gn_4_53221' => 'lsa', 'Lsat_1_v5_gn_4_71961' => 'lsa', 'Lsat_1_v5_gn_7_105241' => 'lsa', 'Lsat_1_v5_gn_7_21361' => 'lsa', 'Lsat_1_v5_gn_7_28860' => 'lsa', 'Lsat_1_v5_gn_7_31260' => 'lsa', 'Lsat_1_v5_gn_8_52801' => 'lsa', 'Manes.02G191400' => 'mes', 'Manes.03G110100' => 'mes', 'Manes.04G071100' => 'mes', 'Manes.05G100500' => 'mes', 'Manes.05G164700' => 'mes', 'Manes.15G087000' => 'mes', 'Manes.15G121500' => 'mes', 'Manes.16G028300' => 'mes', 'Manes.17G046100' => 'mes', 'Manes.17G069800' => 'mes', 'Manes.18G100500' => 'mes', 'Mapoly0002s0109' => 'mpo', 'Mapoly0024s0007' => 'mpo', 'Mapoly0089s0032' => 'mpo', 'MBI04_g42241_MAGBIO' => 'mbi', 'MBI05_g11988_MAGBIO' => 'mbi', 'MBI05_g35452_MAGBIO' => 'mbi', 'MBI07_g30179_MAGBIO' => 'mbi', 'MBI07_g35859_MAGBIO' => 'mbi', 'MBI07_g35860_MAGBIO' => 'mbi', 'MBI07_g37166_MAGBIO' => 'mbi', 'MBI08_g18172_MAGBIO' => 'mbi', 'MBI09_g08441_MAGBIO' => 'mbi', 'MBI13_g01676_MAGBIO' => 'mbi', 'MBI14_g42955_MAGBIO' => 'mbi', 'MBI16_g13161_MAGBIO' => 'mbi', 'MBI17_g27204_MAGBIO' => 'mbi', 'MBI19_g21595_MAGBIO' => 'mbi', 'MD00G1148400' => 'mdo', 'MD02G1301200' => 'mdo', 'MD03G1227800' => 'mdo', 'MD05G1041100' => 'mdo', 'MD05G1124800' => 'mdo', 'MD05G1284000' => 'mdo', 'MD05G1338800' => 'mdo', 'MD05G1338900' => 'mdo', 'MD07G1022800' => 'mdo', 'MD10G1047500' => 'mdo', 'MD10G1127500' => 'mdo', 'MD10G1262300' => 'mdo', 'MD10G1293800' => 'mdo', 'MD16G1074300' => 'mdo', 'Medtr1g021670' => 'mtr', 'Medtr1g096320' => 'mtr', 'Medtr2g013690' => 'mtr', 'Medtr2g019450' => 'mtr', 'Medtr2g085170' => 'mtr', 'Medtr4g088785' => 'mtr', 'Medtr8g055930' => 'mtr', 'Medtr8g085850' => 'mtr', 'MELO3C002605.2' => 'cme', 'MELO3C003891.2' => 'cme', 'MELO3C004012.2' => 'cme', 'MELO3C007134.2' => 'cme', 'MELO3C008118.2' => 'cme', 'MELO3C016700.2' => 'cme', 'MELO3C024127.2' => 'cme', 'MELO3C033361.2' => 'cme', 'MELO3C033362.2' => 'cme', 'Migut.C00430' => 'egut', 'Migut.C01246' => 'egut', 'Migut.E00101' => 'egut', 'Migut.H01486' => 'egut', 'Migut.H01939' => 'egut', 'Migut.K00360' => 'egut', 'Migut.M00910' => 'egut', 'Migut.M01139' => 'egut', 'Migut.N02677' => 'egut', 'MSTRG.13252' => 'ama', 'MSTRG.14701' => 'ama', 'MSTRG.1521' => 'ama', 'MSTRG.15884' => 'ama', 'MSTRG.16242' => 'ama', 'MSTRG.22285' => 'ama', 'MSTRG.22444' => 'ama', 'MSTRG.2349' => 'ama', 'MSTRG.26308' => 'ama', 'MSTRG.28296' => 'ama', 'MSTRG.9895' => 'ama', 'Nitab4.5_0000110g0060' => 'nta', 'Nitab4.5_0000420g0130' => 'nta', 'Nitab4.5_0000422g0030' => 'nta', 'Nitab4.5_0000560g0180' => 'nta', 'Nitab4.5_0000703g0100' => 'nta', 'Nitab4.5_0000786g0200' => 'nta', 'Nitab4.5_0001336g0020' => 'nta', 'Nitab4.5_0001796g0030' => 'nta', 'Nitab4.5_0003348g0060' => 'nta', 'Nitab4.5_0003698g0040' => 'nta', 'Nitab4.5_0003942g0090' => 'nta', 'Nitab4.5_0004775g0070' => 'nta', 'Nitab4.5_0004864g0030' => 'nta', 'Nitab4.5_0005615g0020' => 'nta', 'Nitab4.5_0009288g0030' => 'nta', 'Nitab4.5_0009341g0010' => 'nta', 'Nitab4.5_0009535g0010' => 'nta', 'Nn1g03995' => 'nnu', 'Nn1g04100' => 'nnu', 'Nn1g06530' => 'nnu', 'Nn3g16404' => 'nnu', 'Nn3g17212' => 'nnu', 'Nn3g20776' => 'nnu', 'Nn3g21923' => 'nnu', 'Nn5g27737' => 'nnu', 'Nn5g29461' => 'nnu', 'Nn7g38355' => 'nnu', 'Nn8g39873' => 'nnu', 'Oeu000548.2' => 'oeu', 'Oeu004672.1' => 'oeu', 'Oeu015605.2' => 'oeu', 'Oeu016092.1' => 'oeu', 'Oeu017879.3' => 'oeu', 'Oeu024910.1' => 'oeu', 'Oeu028965.1' => 'oeu', 'Oeu031269.1' => 'oeu', 'Oeu031270.1' => 'oeu', 'Oeu032535.1' => 'oeu', 'Oeu034151.1' => 'oeu', 'Oeu034152.1' => 'oeu', 'Oeu034588.2' => 'oeu', 'Oeu050846.1' => 'oeu', 'Oeu050849.2' => 'oeu', 'Oeu051063.2' => 'oeu', 'Oeu052368.1' => 'oeu', 'Oeu052370.1' => 'oeu', 'Os01g0210400' => 'osa', 'Os01g0304300' => 'osa', 'Os01g0749100' => 'osa', 'Os02g0745800' => 'osa', 'Os03g0769050' => 'osa', 'Os05g0531500' => 'osa', 'Os06g0724300' => 'osa', 'Os11g0198100' => 'osa', 'Peaxi162Scf00069g01425' => 'pax', 'Peaxi162Scf00280g00811' => 'pax', 'Peaxi162Scf00310g00615' => 'pax', 'Peaxi162Scf00362g00542' => 'pax', 'Peaxi162Scf00461g00310' => 'pax', 'Peaxi162Scf00530g00118' => 'pax', 'Peaxi162Scf00541g00057' => 'pax', 'Peaxi162Scf00661g00017' => 'pax', 'Peaxi162Scf00926g00027' => 'pax', 'Peaxi162Scf01064g00263' => 'pax', 'Peaxi162Scf01211g00135' => 'pax', 'PGR004G2336' => 'pgr', 'PGR042G0327' => 'pgr', 'PGR042G1957' => 'pgr', 'PGR042G2003' => 'pgr', 'PGR042G3929' => 'pgr', 'PGR083G1137' => 'pgr', 'PGR083G1364' => 'pgr', 'PGSC0003DMG400003381' => 'stu', 'PGSC0003DMG400003417' => 'stu', 'PGSC0003DMG400008981' => 'stu', 'PGSC0003DMG400012417' => 'stu', 'PGSC0003DMG400012823' => 'stu', 'PGSC0003DMG400016885' => 'stu', 'PGSC0003DMG400022812' => 'stu', 'PGSC0003DMG400029726' => 'stu', 'PGSC0003DMG401009243' => 'stu', 'PGSC0003DMG401031505' => 'stu', 'PGSC0003DMG402031505' => 'stu', 'Phvul.001G017600' => 'pvu', 'Phvul.002G193500' => 'pvu', 'Phvul.002G228900' => 'pvu', 'Phvul.002G236800' => 'pvu', 'Phvul.003G049500' => 'pvu', 'Phvul.005G072000' => 'pvu', 'Phvul.006G164800' => 'pvu', 'Phvul.006G185100' => 'pvu', 'Phvul.007G090000' => 'pvu', 'Potri.001G399800' => 'ptr', 'Potri.002G149900' => 'ptr', 'Potri.004G044100' => 'ptr', 'Potri.004G177600' => 'ptr', 'Potri.009G138000' => 'ptr', 'Potri.010G094000' => 'ptr', 'Potri.011G053000' => 'ptr', 'Potri.011G119300' => 'ptr', 'Potri.013G113700' => 'ptr', 'Potri.018G107800' => 'ptr', 'Potri.019G084100' => 'ptr', 'Pp3c14_23720' => 'ppa', 'Pp3c16_6340' => 'ppa', 'Pp3c23_13420' => 'ppa', 'Pp3c24_2740' => 'ppa', 'Pp3c25_860' => 'ppa', 'Pp3c8_21750' => 'ppa', 'Prupe.1G273000' => 'ppe', 'Prupe.1G273700' => 'ppe', 'Prupe.1G274100' => 'ppe', 'Prupe.2G023300' => 'ppe', 'Prupe.4G048000' => 'ppe', 'Prupe.4G080400' => 'ppe', 'Prupe.4G181200' => 'ppe', 'Prupe.8G056900' => 'ppe', 'Prupe.8G168700' => 'ppe', 'Psat1g189080' => 'psa', 'Psat1g204760' => 'psa', 'Psat4g175560' => 'psa', 'Psat4g177720' => 'psa', 'Psat5g244240' => 'psa', 'Psat6g010720' => 'psa', 'Psat6g187200' => 'psa', 'Psat7g072040' => 'psa', 'PSO017G3501' => 'pso', 'PSO063G2148' => 'pso', 'PSO063G5608' => 'pso', 'PSO210G6392' => 'pso', 'PSO541G2319' => 'pso', 'PSO541G2836' => 'pso', 'PSO541G4012' => 'pso', 'PSO541G6253' => 'pso', 'PSO675G0580' => 'pso', 'PSO675G0856' => 'pso', 'PSO675G5635' => 'pso', 'PSO675G9157' => 'pso', 'PSO832G1660' => 'pso', 'PSO832G1969' => 'pso', 'QL02p007186' => 'qlo', 'QL02p033904' => 'qlo', 'QL03p064391' => 'qlo', 'QL05p040593' => 'qlo', 'QL05p058242' => 'qlo', 'QL08p021825' => 'qlo', 'QL11p004981' => 'qlo', 'RcHm_v2.0_Chr1g0318301' => 'rch', 'RcHm_v2.0_Chr4g0418501' => 'rch', 'RcHm_v2.0_Chr4g0439971' => 'rch', 'RcHm_v2.0_Chr5g0008541' => 'rch', 'RcHm_v2.0_Chr5g0014101' => 'rch', 'RcHm_v2.0_Chr5g0014131' => 'rch', 'RcHm_v2.0_Chr5g0033621' => 'rch', 'RcHm_v2.0_Chr6g0272041' => 'rch', 'RcHm_v2.0_Chr6g0278831' => 'rch', 'Rhsim02G0130400' => 'rsi', 'Rhsim02G0171100' => 'rsi', 'Rhsim05G0053000' => 'rsi', 'Rhsim05G0053100' => 'rsi', 'Rhsim06G0096500' => 'rsi', 'Rhsim06G0096600' => 'rsi', 'Rhsim06G0199100' => 'rsi', 'Rhsim12G0062300' => 'rsi', 'Rhsim12G0062800' => 'rsi', 'Sabra02G0118600' => 'sbr', 'Sabra04G0027300' => 'sbr', 'Sabra04G0119500' => 'sbr', 'Sabra08G0112500' => 'sbr', 'Sabra11G0036800' => 'sbr', 'Sabra11G0103800' => 'sbr', 'Sabra13G0096300' => 'sbr', 'Sabra16G0262300' => 'sbr', 'Sabra18G0091700' => 'sbr', 'Sabra19G0095400' => 'sbr', 'SalBow6G3080' => 'sbo', 'SalBow7G1157' => 'sbo', 'SalBow7G2123' => 'sbo', 'SalBow7G2285' => 'sbo', 'SalBow7G3537' => 'sbo', 'SalBow8G2947' => 'sbo', 'SalBow8G4463' => 'sbo', 'SalBow8G5466' => 'sbo', 'Sc01g0001750' => 'sci', 'Sc02g0006640' => 'sci', 'Sc02g0006670' => 'sci', 'Sc04g0008220' => 'sci', 'Sc05g0006190' => 'sci', 'Sc08g0002760' => 'sci', 'Sc17g0006170' => 'sci', 'Sc22g0002050' => 'sci', 'Sc23g0001190' => 'sci', 'Sc24g0000980' => 'sci', 'Sed0006245' => 'sed', 'Sed0007543' => 'sed', 'Sed0009411' => 'sed', 'Sed0010765' => 'sed', 'Sed0012944' => 'sed', 'Sed0014682' => 'sed', 'Sed0016174' => 'sed', 'Sed0016796' => 'sed', 'Sed0020317' => 'sed', 'Sed0021467' => 'sed', 'SEGI_01316' => 'sgi', 'SEGI_03374' => 'sgi', 'SEGI_16265' => 'sgi', 'SEGI_18569' => 'sgi', 'SEGI_20351' => 'sgi', 'SEGI_26395' => 'sgi', 'SEGI_29469' => 'sgi', 'SEGI_34771' => 'sgi', 'SEGI_36769' => 'sgi', 'SEGI_37139' => 'sgi', 'SGA_v2.0_scaffold100G29687' => 'sas', 'SGA_v2.0_scaffold118G32472' => 'sas', 'SGA_v2.0_scaffold14G07051' => 'sas', 'SGA_v2.0_scaffold183G39845' => 'sas', 'SGA_v2.0_scaffold1G00174' => 'sas', 'SGA_v2.0_scaffold22G09714' => 'sas', 'SGA_v2.0_scaffold333G48992' => 'sas', 'SGA_v2.0_scaffold46G17491' => 'sas', 'SGA_v2.0_scaffold49G18294' => 'sas', 'SGA_v2.0_scaffold63G21658' => 'sas', 'SHI01741' => 'shi', 'SHI05771' => 'shi', 'SHI18077' => 'shi', 'SHI20525' => 'shi', 'SHI20527' => 'shi', 'SHI20528' => 'shi', 'SMO172G0185' => 'smo', 'SMO198G0020' => 'smo', 'SMO351G0006' => 'smo', 'SMO356G0118' => 'smo', 'SMO358G0296' => 'smo', 'SMO367G0079' => 'smo', 'SMO367G1277' => 'smo', 'Solyc01g014220.3' => 'sly', 'Solyc01g111770.2' => 'sly', 'Solyc02g078180.3' => 'sly', 'Solyc03g006430.3' => 'sly', 'Solyc03g006456.1' => 'sly', 'Solyc03g079860.2' => 'sly', 'Solyc04g079770.3' => 'sly', 'Solyc05g007430.4' => 'sly', 'Solyc07g063150.3' => 'sly', 'Solyc08g016620.3' => 'sly', 'Solyc09g057590.3' => 'sly', 'Solyc09g057600.1' => 'sly', 'Solyc10g009050.3' => 'sly', 'Solyc11g017420.2' => 'sly', 'Sopen01g053810' => 'spe', 'Sopen02g023040' => 'spe', 'Sopen03g002440' => 'spe', 'Sopen04g033350' => 'spe', 'Sopen05g003310' => 'spe', 'Sopen07g004050' => 'spe', 'Sopen07g031340' => 'spe', 'Sopen08g006990' => 'spe', 'Sopen10g004830' => 'spe', 'Sopen11g009370' => 'spe', 'Sp1g24450' => 'spa', 'Sp1g29670' => 'spa', 'Sp1g39600' => 'spa', 'Sp2g11080' => 'spa', 'Sp2g13970' => 'spa', 'Sp4g16130' => 'spa', 'Sp6g13080' => 'spa', 'Sp7g37270' => 'spa', 'TAR371G0065' => 'tar', 'TAR376G0340' => 'tar', 'TAR376G0435' => 'tar', 'TAR381G0002' => 'tar', 'TAR381G1236' => 'tar', 'TAR624G0055' => 'tar', 'TAR624G0324' => 'tar', 'TAR624G0696' => 'tar', 'TAR624G0906' => 'tar', 'TAR625G0107' => 'tar', 'TAR626G0015' => 'tar', 'TAR626G1356' => 'tar', 'TAR627G0888' => 'tar', 'TAR628G0399' => 'tar', 'TAR628G1327' => 'tar', 'TAR629G2831' => 'tar', 'TAR629G2874' => 'tar', 'TAR633G1432' => 'tar', 'TAR633G2771' => 'tar', 'THA.LOC104803394' => 'tha', 'THA.LOC104805153' => 'tha', 'THA.LOC104806784' => 'tha', 'THA.LOC104810473' => 'tha', 'THA.LOC104813100' => 'tha', 'THA.LOC104814215' => 'tha', 'THA.LOC104815554' => 'tha', 'THA.LOC104820544' => 'tha', 'THA.LOC104824754' => 'tha', 'THA.LOC104827717' => 'tha', 'Thecc.02G031400' => 'tca', 'Thecc.02G055900' => 'tca', 'Thecc.02G350800' => 'tca', 'Thecc.06G150900' => 'tca', 'Thecc.06G186600' => 'tca', 'Thecc.07G089600' => 'tca', 'Thecc.08G020400' => 'tca', 'Thecc.08G182100' => 'tca', 'Thhalv10000873m.g' => 'esa', 'Thhalv10004185m.g' => 'esa', 'Thhalv10006981m.g' => 'esa', 'Thhalv10007204m.g' => 'esa', 'Thhalv10011374m.g' => 'esa', 'Thhalv10013482m.g' => 'esa', 'Thhalv10017801m.g' => 'esa', 'Thhalv10024983m.g' => 'esa', 'TPR.G12072' => 'tpr', 'TPR.G15769' => 'tpr', 'TPR.G16504' => 'tpr', 'TPR.G16506' => 'tpr', 'TPR.G24345' => 'tpr', 'TPR.G26666' => 'tpr', 'TPR.G27320' => 'tpr', 'TPR.G31819' => 'tpr', 'TPR.G38879' => 'tpr', 'TPR.G39015' => 'tpr', 'TPR.G8819' => 'tpr', 'TWI09G0924' => 'twi', 'TWI12G0811' => 'twi', 'TWI12G1294' => 'twi', 'TWI31G0150' => 'twi', 'TWI36G1262' => 'twi', 'TWI38G1287' => 'twi', 'TWI38G1633' => 'twi', 'TWI38G1982' => 'twi', 'TWI39G0116' => 'twi', 'TWI60G1011' => 'twi', 'TWI63G0171' => 'twi', 'TWI73G0839' => 'twi', 'TWI79G1511' => 'twi', 'unitig_0.g915' => 'ugi', 'unitig_0.g916' => 'ugi', 'unitig_21.g20219' => 'ugi', 'unitig_21.g20416' => 'ugi', 'unitig_578.g16132' => 'ugi', 'unitig_578.g16718' => 'ugi', 'unitig_62.g23481' => 'ugi', 'unitig_744.g24535' => 'ugi', 'unitig_749.g13525' => 'ugi', 'vmacro01248' => 'vma', 'vmacro02290' => 'vma', 'vmacro10946' => 'vma', 'vmacro11865' => 'vma', 'vmacro12493' => 'vma', 'vmacro17322' => 'vma', 'vmacro21599' => 'vma', 'vmacro23041' => 'vma', 'VMungo0251G0004' => 'vmu', 'VMungo0251G2639' => 'vmu', 'VMungo0251G2967' => 'vmu', 'VMungo0540G0864' => 'vmu', 'VMungo0540G1569' => 'vmu', 'VMungo0647G0317' => 'vmu', 'VMungo0720G1373' => 'vmu', 'VMungo0720G1508' => 'vmu', 'VMungo1080G0485' => 'vmu', 'VMungo1215G3177' => 'vmu', 'Zm00001eb112600' => 'zma', 'Zm00001eb120220' => 'zma', 'Zm00001eb153240' => 'zma', 'Zm00001eb168880' => 'zma', 'Zm00001eb213920' => 'zma', 'Zm00001eb228280' => 'zma', 'Zm00001eb254580' => 'zma', 'Zm00001eb272180' => 'zma', 'Zm00001eb293190' => 'zma', 'Zm00001eb322930' => 'zma', 'Zm00001eb353360' => 'zma', 'Zm00001eb353390' => 'zma', 'Zm00001eb353430' => 'zma', 'Zm00001eb353440' => 'zma', 'Zm00001eb353780' => 'zma' ), 'gf_id' => 'HOM05D000499', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000499' ), 'data_identifier' => 'HOM05D000499', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000499', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1066', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p29780' => 'bna', 'A02p33180' => 'bna', 'A03p16470' => 'bna', 'A03p66010' => 'bna', 'A04p25970' => 'bna', 'A06p01270' => 'bna', 'A06p46080' => 'bna', 'A07p11400' => 'bna', 'A08p01840' => 'bna', 'A08p08230' => 'bna', 'A08p25740' => 'bna', 'A09p32070' => 'bna', 'A09p37830' => 'bna', 'A09p42840' => 'bna', 'A09p42850' => 'bna', 'Aa31LG10G2060' => 'aar', 'Aa31LG2G7410' => 'aar', 'Aa31LG6G10200' => 'aar', 'Aa31LG6G16680' => 'aar', 'Aa31LG6G8470' => 'aar', 'Aa31LG9G12730' => 'aar', 'Aa31LG9G13680' => 'aar', 'Aa31LG9G14920' => 'aar', 'Aa31LG9G6650' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4977' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5467' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3254' => 'aag', 'Actinidia02578' => 'ach', 'Actinidia07693' => 'ach', 'Actinidia08413' => 'ach', 'Actinidia08414' => 'ach', 'Actinidia15289' => 'ach', 'Actinidia19871' => 'ach', 'Actinidia21475' => 'ach', 'Actinidia22576' => 'ach', 'Actinidia28327' => 'ach', 'Actinidia32491' => 'ach', 'Actinidia39463' => 'ach', 'Actinidia39571' => 'ach', 'Ah.01g013750' => 'amhyb', 'Ah.01g023210' => 'amhyb', 'Ah.04g164850' => 'amhyb', 'Ah.05g178060' => 'amhyb', 'Ah.07g204270' => 'amhyb', 'Ah.07g208480' => 'amhyb', 'Ah.09g237410' => 'amhyb', 'Ah.14g089460' => 'amhyb', 'AL1G41790' => 'aly', 'AL1G49050' => 'aly', 'AL1G53810' => 'aly', 'AL1G61400' => 'aly', 'AL4G18580' => 'aly', 'AL5G12510' => 'aly', 'AL5G12540' => 'aly', 'AL6G43230' => 'aly', 'AL7G10370' => 'aly', 'AL7G19250' => 'aly', 'AL8G12240' => 'aly', 'AL8G18540' => 'aly', 'Aqoxy1G02409' => 'aox', 'Aqoxy2G03993' => 'aox', 'Aqoxy3G03357' => 'aox', 'Aqoxy4G00785' => 'aox', 'Aqoxy5G02598' => 'aox', 'Aqoxy6G00132' => 'aox', 'Aqoxy7G01776' => 'aox', 'Aqoxy7G02316' => 'aox', 'Aqoxy7G03973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.12AFKW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B8730' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27IQR1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3F75VG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3RE0GA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41TCQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.527VTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FIR39' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5W8UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DA38EV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ63HS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H1I32C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HC27T5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4M8AP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7N3CZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9UVDZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LS1NQA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT1D4B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SKC4TM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCFV76' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF9Q1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQWD9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1ZM88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WE07RT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YCK7VH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJE6Q6' => 'arhy', 'AT1G28240' => 'ath', 'AT1G34550' => 'ath', 'AT1G53040' => 'ath', 'AT2G02910' => 'ath', 'AT4G09630' => 'ath', 'AT4G38500' => 'ath', 'AT5G42660' => 'ath', 'AT5G46220' => 'ath', 'ATR0152G026' => 'atr', 'ATR0564G343' => 'atr', 'ATR0706G151' => 'atr', 'ATR0733G207' => 'atr', 'ATR0751G234' => 'atr', 'ATR0807G048' => 'atr', 'ATR1091G084' => 'atr', 'Atru.chr10.1229' => 'acertr', 'Atru.chr10.1230' => 'acertr', 'Atru.chr10.1874' => 'acertr', 'Atru.chr11.1808' => 'acertr', 'Atru.chr13.1795' => 'acertr', 'Atru.chr13.570' => 'acertr', 'Atru.chr2.2608' => 'acertr', 'Atru.chr2.2609' => 'acertr', 'Atru.chr5.3428' => 'acertr', 'Atru.chr8.1171' => 'acertr', 'AUR62004651' => 'cqu', 'AUR62008675' => 'cqu', 'AUR62010014' => 'cqu', 'AUR62013004' => 'cqu', 'AUR62014825' => 'cqu', 'AUR62015015' => 'cqu', 'AUR62015151' => 'cqu', 'AUR62017020' => 'cqu', 'AUR62019422' => 'cqu', 'AUR62023570' => 'cqu', 'AUR62025571' => 'cqu', 'AUR62029098' => 'cqu', 'AUR62033863' => 'cqu', 'AUR62034296' => 'cqu', 'AUR62040075' => 'cqu', 'BcaB02g07334' => 'bca', 'BcaB02g10575' => 'bca', 'BcaB03g12119' => 'bca', 'BcaB03g12120' => 'bca', 'BcaB03g13945' => 'bca', 'BcaB04g17123' => 'bca', 'BcaB04g17867' => 'bca', 'BcaB04g19839' => 'bca', 'BcaB07g30317' => 'bca', 'BcaB07g32432' => 'bca', 'BcaB07g33362' => 'bca', 'BcaB08g36611' => 'bca', 'BcaC01g00028' => 'bca', 'BcaC01g01356' => 'bca', 'BcaC01g02034' => 'bca', 'BcaC01g06051' => 'bca', 'BcaC03g16839' => 'bca', 'BcaC03g17176' => 'bca', 'BcaC05g26829' => 'bca', 'BcaC06g31490' => 'bca', 'BcaC06g35344' => 'bca', 'BcaC06g36570' => 'bca', 'BcaC07g37537' => 'bca', 'BcaC08g43491' => 'bca', 'BcaC08g43773' => 'bca', 'BcaNung00234' => 'bca', 'BcaNung01982' => 'bca', 'BcaNung03707' => 'bca', 'BcaNung06454' => 'bca', 'BolC2t10762H' => 'bol', 'BolC2t11191H' => 'bol', 'BolC3t14322H' => 'bol', 'BolC3t19747H' => 'bol', 'BolC3t21425H' => 'bol', 'BolC4t27800H' => 'bol', 'BolC5t31423H' => 'bol', 'BolC6t35951H' => 'bol', 'BolC6t36282H' => 'bol', 'BolC7t40678H' => 'bol', 'BolC7t40679H' => 'bol', 'BolC7t42222H' => 'bol', 'BolC7t43492H' => 'bol', 'BolC7t46785H' => 'bol', 'BolC8t47853H' => 'bol', 'BolC9t56805H' => 'bol', 'BraA02t08000Z' => 'bra', 'BraA02t08341Z' => 'bra', 'BraA03t10936Z' => 'bra', 'BraA03t15657Z' => 'bra', 'BraA04t18100Z' => 'bra', 'BraA05t20523Z' => 'bra', 'BraA06t23353Z' => 'bra', 'BraA06t27473Z' => 'bra', 'BraA06t27769Z' => 'bra', 'BraA07t28928Z' => 'bra', 'BraA08t32236Z' => 'bra', 'BraA08t32841Z' => 'bra', 'BraA08t34524Z' => 'bra', 'BraA09t38742Z' => 'bra', 'BraA09t39295Z' => 'bra', 'C02p47180' => 'bna', 'C02p50990' => 'bna', 'C03p19360' => 'bna', 'C03p74950' => 'bna', 'C03p91000' => 'bna', 'C04p63260' => 'bna', 'C05p27050' => 'bna', 'C06p08750' => 'bna', 'C06p11490' => 'bna', 'C07p02820' => 'bna', 'C07p17180' => 'bna', 'C07p29440' => 'bna', 'C07p63730' => 'bna', 'C09p39260' => 'bna', 'CAN.G1164.34' => 'can', 'CAN.G1164.39' => 'can', 'CAN.G1530.3' => 'can', 'CAN.G162.61' => 'can', 'CAN.G176.6' => 'can', 'CAN.G289.49' => 'can', 'CAN.G370.21' => 'can', 'CAN.G370.22' => 'can', 'CAN.G371.117' => 'can', 'CAN.G58.37' => 'can', 'CAN.G588.98' => 'can', 'CANSAT21G2266' => 'cansat', 'CANSAT25G2799' => 'cansat', 'CANSAT35G0862' => 'cansat', 'CANSAT35G1704' => 'cansat', 'CANSAT35G1760' => 'cansat', 'CANSAT56G3971' => 'cansat', 'CANSAT56G4116' => 'cansat', 'CANSAT80G1259' => 'cansat', 'CARHR027730' => 'chi', 'CARHR033880' => 'chi', 'CARHR043270' => 'chi', 'CARHR145330' => 'chi', 'CARHR145340' => 'chi', 'CARHR175570' => 'chi', 'CARHR181570' => 'chi', 'CARHR258470' => 'chi', 'CARHR260490' => 'chi', 'CARHR294220' => 'chi', 'Carub.0001s2668' => 'cru', 'Carub.0001s3257' => 'cru', 'Carub.0001s4220' => 'cru', 'Carub.0005s0179' => 'cru', 'Carub.0006s2807' => 'cru', 'Carub.0007s0039' => 'cru', 'Carub.0008s0169' => 'cru', 'Carub.0008s0636' => 'cru', 'Ca_00338_v3' => 'car', 'Ca_00542_v3' => 'car', 'Ca_01844_v3' => 'car', 'Ca_10611_v3' => 'car', 'Ca_13326_v3' => 'car', 'Ca_17944_v3' => 'car', 'Ca_18546_v3' => 'car', 'Ca_24219_v3' => 'car', 'Ca_29972_v3' => 'car', 'CBR_g3681' => 'cbr', 'CBR_g40021' => 'cbr', 'Cc01_g08140' => 'ccan', 'Cc02_g13410' => 'ccan', 'Cc02_g37480' => 'ccan', 'Cc05_g12030' => 'ccan', 'Cc09_g03370' => 'ccan', 'Cc09_g10300' => 'ccan', 'Cc10_g03530' => 'ccan', 'Cc10_g11380' => 'ccan', 'CDE01G0176' => 'cde', 'CDE02G0675' => 'cde', 'CDE02G0942' => 'cde', 'CDE02G1153' => 'cde', 'CDE02G4177' => 'cde', 'CDE04G2117' => 'cde', 'CDE04G2736' => 'cde', 'CDE08G1161' => 'cde', 'CDE09G1238' => 'cde', 'Cfa000467' => 'cfa', 'Cfa000947' => 'cfa', 'Cfa004969' => 'cfa', 'Cfa005284' => 'cfa', 'Cfa008993' => 'cfa', 'Cfa018187' => 'cfa', 'Cfa018454' => 'cfa', 'Cfa020585' => 'cfa', 'Ciclev10000424m.g' => 'ccl', 'Ciclev10003605m.g' => 'ccl', 'Ciclev10007828m.g' => 'ccl', 'Ciclev10014620m.g' => 'ccl', 'Ciclev10015169m.g' => 'ccl', 'Ciclev10018291m.g' => 'ccl', 'Ciclev10028256m.g' => 'ccl', 'Ciclev10033822m.g' => 'ccl', 'CiPaw.05G060300' => 'cil', 'CiPaw.05G085000' => 'cil', 'CiPaw.06G083700' => 'cil', 'CiPaw.06G120300' => 'cil', 'CiPaw.09G060500' => 'cil', 'CiPaw.09G123800' => 'cil', 'CiPaw.11G169700' => 'cil', 'CiPaw.12G118300' => 'cil', 'CiPaw.15G071000' => 'cil', 'CiPaw.15G081900' => 'cil', 'ClCG01G024610' => 'cla', 'ClCG03G006070' => 'cla', 'ClCG05G019250' => 'cla', 'ClCG09G009500' => 'cla', 'ClCG11G008200' => 'cla', 'ClCG11G018080' => 'cla', 'COL.COLO4_17373' => 'col', 'COL.COLO4_22994' => 'col', 'COL.COLO4_26389' => 'col', 'COL.COLO4_27170' => 'col', 'COL.COLO4_31074' => 'col', 'COL.COLO4_31465' => 'col', 'COL.COLO4_36438' => 'col', 'COL.COLO4_36439' => 'col', 'Cpa.g.c38781' => 'cpa', 'Cpa.g.sc128.12' => 'cpa', 'Cpa.g.sc166.7' => 'cpa', 'Cpa.g.sc166.8' => 'cpa', 'Cpa.g.sc20.111' => 'cpa', 'Cpa.g.sc27.31' => 'cpa', 'Cpa.g.sc64.36' => 'cpa', 'Cpa.g.sc64.37' => 'cpa', 'Cpa.g.sc66.49' => 'cpa', 'Cpa.g.sc80.64' => 'cpa', 'CsaV3_1G012320' => 'csa', 'CsaV3_2G008480' => 'csa', 'CsaV3_2G033450' => 'csa', 'CsaV3_3G044830' => 'csa', 'CsaV3_4G033710' => 'csa', 'CsaV3_6G051730' => 'csa', 'CsaV3_7G025350' => 'csa', 'CSS0001067' => 'camsi', 'CSS0005996' => 'camsi', 'CSS0006590' => 'camsi', 'CSS0009673' => 'camsi', 'CSS0010201' => 'camsi', 'CSS0010549' => 'camsi', 'CSS0011364' => 'camsi', 'CSS0014473' => 'camsi', 'CSS0014961' => 'camsi', 'CSS0020191' => 'camsi', 'CSS0021165' => 'camsi', 'CSS0022306' => 'camsi', 'CSS0030591' => 'camsi', 'CSS0030696' => 'camsi', 'CSS0032653' => 'camsi', 'CSS0037487' => 'camsi', 'CSS0041102' => 'camsi', 'CSS0041261' => 'camsi', 'CSS0046246' => 'camsi', 'CSS0049256' => 'camsi', 'DCAR_004075' => 'dca', 'DCAR_011538' => 'dca', 'DCAR_019553' => 'dca', 'DCAR_020952' => 'dca', 'DCAR_021739' => 'dca', 'DCAR_027407' => 'dca', 'DCAR_027913' => 'dca', 'DCAR_028066' => 'dca', 'Dinv05899' => 'din', 'Dinv07563' => 'din', 'Dinv08010' => 'din', 'Dinv14125' => 'din', 'Dinv20172' => 'din', 'Dinv30743' => 'din', 'Dinv31229' => 'din', 'Dinv34162' => 'din', 'Dinv36028' => 'din', 'Dinv39368' => 'din', 'Dinv40565' => 'din', 'Dinv41706' => 'din', 'Duzib052G0089' => 'dzi', 'Duzib116G0641' => 'dzi', 'Duzib132G0069' => 'dzi', 'Duzib132G1219' => 'dzi', 'Duzib147G0278' => 'dzi', 'Duzib160G0480' => 'dzi', 'Duzib170G0661' => 'dzi', 'Duzib177G0591' => 'dzi', 'Duzib187G1353' => 'dzi', 'Duzib192G0858' => 'dzi', 'Duzib192G0883' => 'dzi', 'Duzib213G0506' => 'dzi', 'Duzib235G0289' => 'dzi', 'Duzib251G0422' => 'dzi', 'ECA232G3898' => 'eca', 'ECA233G5950' => 'eca', 'ECA234G1699' => 'eca', 'ECA234G2421' => 'eca', 'ECA236G0426' => 'eca', 'ECA236G4331' => 'eca', 'ECA248G2573' => 'eca', 'EL10Ac1g00077' => 'bvu', 'EL10Ac1g01746' => 'bvu', 'EL10Ac2g03464' => 'bvu', 'EL10Ac4g08176' => 'bvu', 'EL10Ac7g17521' => 'bvu', 'EL10Ac8g20386' => 'bvu', 'EL10Ac9g21343' => 'bvu', 'EL10Ac9g22688' => 'bvu', 'Eucgr.B03434' => 'egr', 'Eucgr.D00618' => 'egr', 'Eucgr.E02395' => 'egr', 'Eucgr.F01129' => 'egr', 'Eucgr.F02622' => 'egr', 'Eucgr.F04207' => 'egr', 'FAN01G0570' => 'fan', 'FAN03G3351' => 'fan', 'FAN06G3702' => 'fan', 'FAN07G2149' => 'fan', 'FAN10G3758' => 'fan', 'FAN11G1170' => 'fan', 'FAN11G2050' => 'fan', 'FAN11G2724' => 'fan', 'FAN12G1700' => 'fan', 'FAN12G2028' => 'fan', 'FAN15G1160' => 'fan', 'FAN15G3063' => 'fan', 'FAN16G2540' => 'fan', 'FAN16G3077' => 'fan', 'FAN16G3624' => 'fan', 'FAN17G0221' => 'fan', 'FAN20G2492' => 'fan', 'FAN20G2905' => 'fan', 'FAN21G0548' => 'fan', 'FAN21G1300' => 'fan', 'FAN22G0077' => 'fan', 'FAN22G1315' => 'fan', 'FAN24G1280' => 'fan', 'FAN24G1445' => 'fan', 'FAN24G3527' => 'fan', 'FAN25G0464' => 'fan', 'FAN25G2885' => 'fan', 'FAN25G3270' => 'fan', 'FAN27G1101' => 'fan', 'FAN27G2846' => 'fan', 'FAN27G3524' => 'fan', 'FvH4_2g11770' => 'fve', 'FvH4_2g15630' => 'fve', 'FvH4_3g05570' => 'fve', 'FvH4_3g09110' => 'fve', 'FvH4_3g19940' => 'fve', 'FvH4_4g04821' => 'fve', 'FvH4_4g31480' => 'fve', 'FvH4_7g01740' => 'fve', 'Glyma.05G130400' => 'gma', 'Glyma.05G156400' => 'gma', 'Glyma.07G197000' => 'gma', 'Glyma.08G085151' => 'gma', 'Glyma.08G114500' => 'gma', 'Glyma.08G300400' => 'gma', 'Glyma.10G215800' => 'gma', 'Glyma.12G224400' => 'gma', 'Glyma.13G179300' => 'gma', 'Glyma.13G218151' => 'gma', 'Glyma.13G238800' => 'gma', 'Glyma.13G276900' => 'gma', 'Glyma.14G078200' => 'gma', 'Glyma.15G074500' => 'gma', 'Glyma.15G094100' => 'gma', 'Glyma.17G247200' => 'gma', 'Glyma.18G120100' => 'gma', 'Glyma.20G176000' => 'gma', 'Gohir.A01G063600' => 'ghi', 'Gohir.A01G170301' => 'ghi', 'Gohir.A02G060500' => 'ghi', 'Gohir.A05G133850' => 'ghi', 'Gohir.A05G161400' => 'ghi', 'Gohir.A06G012900' => 'ghi', 'Gohir.A06G035901' => 'ghi', 'Gohir.A06G127100' => 'ghi', 'Gohir.A06G210500' => 'ghi', 'Gohir.A08G008650' => 'ghi', 'Gohir.A09G072700' => 'ghi', 'Gohir.A09G088301' => 'ghi', 'Gohir.A10G040600' => 'ghi', 'Gohir.A12G036300' => 'ghi', 'Gohir.A12G143350' => 'ghi', 'Gohir.A12G165500' => 'ghi', 'Gohir.A13G145700' => 'ghi', 'Gohir.D01G050000' => 'ghi', 'Gohir.D01G051366' => 'ghi', 'Gohir.D01G161350' => 'ghi', 'Gohir.D02G065900' => 'ghi', 'Gohir.D05G164200' => 'ghi', 'Gohir.D05G355500' => 'ghi', 'Gohir.D06G010400' => 'ghi', 'Gohir.D06G111250' => 'ghi', 'Gohir.D06G132000' => 'ghi', 'Gohir.D06G210500' => 'ghi', 'Gohir.D07G165675' => 'ghi', 'Gohir.D08G062240' => 'ghi', 'Gohir.D08G086101' => 'ghi', 'Gohir.D08G138060' => 'ghi', 'Gohir.D09G072300' => 'ghi', 'Gohir.D10G041400' => 'ghi', 'Gohir.D11G191020' => 'ghi', 'Gohir.D11G212066' => 'ghi', 'Gohir.D12G036300' => 'ghi', 'Gohir.D12G168600' => 'ghi', 'Gohir.D13G150600' => 'ghi', 'Gorai.001G057300' => 'gra', 'Gorai.002G069900' => 'gra', 'Gorai.002G200000' => 'gra', 'Gorai.003G067600' => 'gra', 'Gorai.005G074800' => 'gra', 'Gorai.006G087300' => 'gra', 'Gorai.008G037500' => 'gra', 'Gorai.008G181400' => 'gra', 'Gorai.009G169400' => 'gra', 'Gorai.009G387900' => 'gra', 'Gorai.010G013300' => 'gra', 'Gorai.010G153800' => 'gra', 'Gorai.010G255800' => 'gra', 'Gorai.011G043700' => 'gra', 'Gorai.011G198900' => 'gra', 'Gorai.013G168400' => 'gra', 'GSVIVG01005212001' => 'vvi', 'GSVIVG01006163001' => 'vvi', 'GSVIVG01009625001' => 'vvi', 'GSVIVG01014338001' => 'vvi', 'GSVIVG01020005001' => 'vvi', 'GSVIVG01021450001' => 'vvi', 'GSVIVG01023975001' => 'vvi', 'GSVIVG01034490001' => 'vvi', 'HanXRQChr04g0112071' => 'han', 'HanXRQChr05g0131151' => 'han', 'HanXRQChr09g0262371' => 'han', 'HanXRQChr09g0268401' => 'han', 'HanXRQChr10g0279241' => 'han', 'HanXRQChr10g0297961' => 'han', 'HanXRQChr11g0326231' => 'han', 'HanXRQChr11g0328471' => 'han', 'HanXRQChr16g0507941' => 'han', 'HanXRQChr17g0560211' => 'han', 'Haze_02108' => 'cav', 'Haze_02428' => 'cav', 'Haze_05593' => 'cav', 'Haze_06448' => 'cav', 'Haze_09427' => 'cav', 'Haze_12022' => 'cav', 'Haze_17612' => 'cav', 'Haze_17928' => 'cav', 'Hma1.2p1_0032F.1_g019250' => 'hma', 'Hma1.2p1_0163F.1_g072690' => 'hma', 'Hma1.2p1_0265F.1_g106710' => 'hma', 'Hma1.2p1_0286F.1_g113970' => 'hma', 'Hma1.2p1_0363F.1_g136640' => 'hma', 'Hma1.2p1_0584F.1_g183470' => 'hma', 'Hma1.2p1_0885F.1_g232570' => 'hma', 'HPP92_006022' => 'vpl', 'HPP92_007320' => 'vpl', 'HPP92_011521' => 'vpl', 'HPP92_019387' => 'vpl', 'HPP92_024038' => 'vpl', 'Hund05891' => 'sun', 'Hund06450' => 'sun', 'Hund12053' => 'sun', 'Hund16800' => 'sun', 'Hund21222' => 'sun', 'Hund22896' => 'sun', 'Hund23746' => 'sun', 'Hund27083' => 'sun', 'Lalb_Chr02g0141831' => 'lal', 'Lalb_Chr02g0141841' => 'lal', 'Lalb_Chr05g0220411' => 'lal', 'Lalb_Chr06g0162081' => 'lal', 'Lalb_Chr09g0327651' => 'lal', 'Lalb_Chr13g0295051' => 'lal', 'Lalb_Chr15g0086801' => 'lal', 'Lalb_Chr16g0383781' => 'lal', 'Lalb_Chr16g0383791' => 'lal', 'Lalb_Chr18g0055441' => 'lal', 'Lalb_Chr18g0059611' => 'lal', 'Lalb_Chr20g0109661' => 'lal', 'Lalb_Chr20g0109831' => 'lal', 'Lalb_Chr20g0121871' => 'lal', 'Lalb_Chr22g0355361' => 'lal', 'Lalb_Chr25g0286371' => 'lal', 'Lj1A1187G43' => 'lonja', 'Lj1A1205T50' => 'lonja', 'Lj1A800G33' => 'lonja', 'Lj1C1187T7' => 'lonja', 'Lj1C843T11' => 'lonja', 'Lj1g0010940' => 'lja', 'Lj2A288T69' => 'lonja', 'Lj3g0024276' => 'lja', 'Lj4A47T76' => 'lonja', 'Lj4g0005805' => 'lja', 'Lj4g0006097' => 'lja', 'Lj4g0008528' => 'lja', 'Lj4g0024907' => 'lja', 'Lj5g0012472' => 'lja', 'Lj5g0018648' => 'lja', 'Lj6C789G1' => 'lonja', 'Lj6g0004000' => 'lja', 'Lj7A292G67' => 'lonja', 'Lj7A292T64' => 'lonja', 'Lj9A400T58' => 'lonja', 'Lsat_1_v5_gn_1_126181' => 'lsa', 'Lsat_1_v5_gn_4_123041' => 'lsa', 'Lsat_1_v5_gn_4_133620' => 'lsa', 'Lsat_1_v5_gn_4_53221' => 'lsa', 'Lsat_1_v5_gn_4_71961' => 'lsa', 'Lsat_1_v5_gn_7_105241' => 'lsa', 'Lsat_1_v5_gn_7_21361' => 'lsa', 'Lsat_1_v5_gn_7_28860' => 'lsa', 'Lsat_1_v5_gn_7_31260' => 'lsa', 'Lsat_1_v5_gn_8_52801' => 'lsa', 'Manes.02G191400' => 'mes', 'Manes.03G110100' => 'mes', 'Manes.04G071100' => 'mes', 'Manes.05G100500' => 'mes', 'Manes.05G164700' => 'mes', 'Manes.15G087000' => 'mes', 'Manes.15G121500' => 'mes', 'Manes.16G028300' => 'mes', 'Manes.17G046100' => 'mes', 'Manes.17G069800' => 'mes', 'Manes.18G100500' => 'mes', 'Mapoly0002s0109' => 'mpo', 'Mapoly0024s0007' => 'mpo', 'Mapoly0089s0032' => 'mpo', 'MBI04_g42241_MAGBIO' => 'mbi', 'MBI05_g11988_MAGBIO' => 'mbi', 'MBI05_g35452_MAGBIO' => 'mbi', 'MBI07_g30179_MAGBIO' => 'mbi', 'MBI07_g35859_MAGBIO' => 'mbi', 'MBI07_g35860_MAGBIO' => 'mbi', 'MBI07_g37166_MAGBIO' => 'mbi', 'MBI08_g18172_MAGBIO' => 'mbi', 'MBI09_g08441_MAGBIO' => 'mbi', 'MBI13_g01676_MAGBIO' => 'mbi', 'MBI14_g42955_MAGBIO' => 'mbi', 'MBI16_g13161_MAGBIO' => 'mbi', 'MBI17_g27204_MAGBIO' => 'mbi', 'MBI19_g21595_MAGBIO' => 'mbi', 'MD00G1148400' => 'mdo', 'MD02G1301200' => 'mdo', 'MD03G1227800' => 'mdo', 'MD05G1041100' => 'mdo', 'MD05G1124800' => 'mdo', 'MD05G1284000' => 'mdo', 'MD05G1338800' => 'mdo', 'MD05G1338900' => 'mdo', 'MD07G1022800' => 'mdo', 'MD10G1047500' => 'mdo', 'MD10G1127500' => 'mdo', 'MD10G1262300' => 'mdo', 'MD10G1293800' => 'mdo', 'MD16G1074300' => 'mdo', 'Medtr1g021670' => 'mtr', 'Medtr1g096320' => 'mtr', 'Medtr2g013690' => 'mtr', 'Medtr2g019450' => 'mtr', 'Medtr2g085170' => 'mtr', 'Medtr4g088785' => 'mtr', 'Medtr8g055930' => 'mtr', 'Medtr8g085850' => 'mtr', 'MELO3C002605.2' => 'cme', 'MELO3C003891.2' => 'cme', 'MELO3C004012.2' => 'cme', 'MELO3C007134.2' => 'cme', 'MELO3C008118.2' => 'cme', 'MELO3C016700.2' => 'cme', 'MELO3C024127.2' => 'cme', 'MELO3C033361.2' => 'cme', 'MELO3C033362.2' => 'cme', 'Migut.C00430' => 'egut', 'Migut.C01246' => 'egut', 'Migut.E00101' => 'egut', 'Migut.H01486' => 'egut', 'Migut.H01939' => 'egut', 'Migut.K00360' => 'egut', 'Migut.M00910' => 'egut', 'Migut.M01139' => 'egut', 'Migut.N02677' => 'egut', 'MSTRG.13252' => 'ama', 'MSTRG.14701' => 'ama', 'MSTRG.1521' => 'ama', 'MSTRG.15884' => 'ama', 'MSTRG.16242' => 'ama', 'MSTRG.22285' => 'ama', 'MSTRG.22444' => 'ama', 'MSTRG.2349' => 'ama', 'MSTRG.26308' => 'ama', 'MSTRG.28296' => 'ama', 'MSTRG.9895' => 'ama', 'Nitab4.5_0000110g0060' => 'nta', 'Nitab4.5_0000420g0130' => 'nta', 'Nitab4.5_0000422g0030' => 'nta', 'Nitab4.5_0000560g0180' => 'nta', 'Nitab4.5_0000703g0100' => 'nta', 'Nitab4.5_0000786g0200' => 'nta', 'Nitab4.5_0001336g0020' => 'nta', 'Nitab4.5_0001796g0030' => 'nta', 'Nitab4.5_0003348g0060' => 'nta', 'Nitab4.5_0003698g0040' => 'nta', 'Nitab4.5_0003942g0090' => 'nta', 'Nitab4.5_0004775g0070' => 'nta', 'Nitab4.5_0004864g0030' => 'nta', 'Nitab4.5_0005615g0020' => 'nta', 'Nitab4.5_0009288g0030' => 'nta', 'Nitab4.5_0009341g0010' => 'nta', 'Nitab4.5_0009535g0010' => 'nta', 'Nn1g03995' => 'nnu', 'Nn1g04100' => 'nnu', 'Nn1g06530' => 'nnu', 'Nn3g16404' => 'nnu', 'Nn3g17212' => 'nnu', 'Nn3g20776' => 'nnu', 'Nn3g21923' => 'nnu', 'Nn5g27737' => 'nnu', 'Nn5g29461' => 'nnu', 'Nn7g38355' => 'nnu', 'Nn8g39873' => 'nnu', 'Oeu000548.2' => 'oeu', 'Oeu004672.1' => 'oeu', 'Oeu015605.2' => 'oeu', 'Oeu016092.1' => 'oeu', 'Oeu017879.3' => 'oeu', 'Oeu024910.1' => 'oeu', 'Oeu028965.1' => 'oeu', 'Oeu031269.1' => 'oeu', 'Oeu031270.1' => 'oeu', 'Oeu032535.1' => 'oeu', 'Oeu034151.1' => 'oeu', 'Oeu034152.1' => 'oeu', 'Oeu034588.2' => 'oeu', 'Oeu050846.1' => 'oeu', 'Oeu050849.2' => 'oeu', 'Oeu051063.2' => 'oeu', 'Oeu052368.1' => 'oeu', 'Oeu052370.1' => 'oeu', 'Os01g0210400' => 'osa', 'Os01g0304300' => 'osa', 'Os01g0749100' => 'osa', 'Os02g0745800' => 'osa', 'Os03g0769050' => 'osa', 'Os05g0531500' => 'osa', 'Os06g0724300' => 'osa', 'Os11g0198100' => 'osa', 'Peaxi162Scf00069g01425' => 'pax', 'Peaxi162Scf00280g00811' => 'pax', 'Peaxi162Scf00310g00615' => 'pax', 'Peaxi162Scf00362g00542' => 'pax', 'Peaxi162Scf00461g00310' => 'pax', 'Peaxi162Scf00530g00118' => 'pax', 'Peaxi162Scf00541g00057' => 'pax', 'Peaxi162Scf00661g00017' => 'pax', 'Peaxi162Scf00926g00027' => 'pax', 'Peaxi162Scf01064g00263' => 'pax', 'Peaxi162Scf01211g00135' => 'pax', 'PGR004G2336' => 'pgr', 'PGR042G0327' => 'pgr', 'PGR042G1957' => 'pgr', 'PGR042G2003' => 'pgr', 'PGR042G3929' => 'pgr', 'PGR083G1137' => 'pgr', 'PGR083G1364' => 'pgr', 'PGSC0003DMG400003381' => 'stu', 'PGSC0003DMG400003417' => 'stu', 'PGSC0003DMG400008981' => 'stu', 'PGSC0003DMG400012417' => 'stu', 'PGSC0003DMG400012823' => 'stu', 'PGSC0003DMG400016885' => 'stu', 'PGSC0003DMG400022812' => 'stu', 'PGSC0003DMG400029726' => 'stu', 'PGSC0003DMG401009243' => 'stu', 'PGSC0003DMG401031505' => 'stu', 'PGSC0003DMG402031505' => 'stu', 'Phvul.001G017600' => 'pvu', 'Phvul.002G193500' => 'pvu', 'Phvul.002G228900' => 'pvu', 'Phvul.002G236800' => 'pvu', 'Phvul.003G049500' => 'pvu', 'Phvul.005G072000' => 'pvu', 'Phvul.006G164800' => 'pvu', 'Phvul.006G185100' => 'pvu', 'Phvul.007G090000' => 'pvu', 'Potri.001G399800' => 'ptr', 'Potri.002G149900' => 'ptr', 'Potri.004G044100' => 'ptr', 'Potri.004G177600' => 'ptr', 'Potri.009G138000' => 'ptr', 'Potri.010G094000' => 'ptr', 'Potri.011G053000' => 'ptr', 'Potri.011G119300' => 'ptr', 'Potri.013G113700' => 'ptr', 'Potri.018G107800' => 'ptr', 'Potri.019G084100' => 'ptr', 'Pp3c14_23720' => 'ppa', 'Pp3c16_6340' => 'ppa', 'Pp3c23_13420' => 'ppa', 'Pp3c24_2740' => 'ppa', 'Pp3c25_860' => 'ppa', 'Pp3c8_21750' => 'ppa', 'Prupe.1G273000' => 'ppe', 'Prupe.1G273700' => 'ppe', 'Prupe.1G274100' => 'ppe', 'Prupe.2G023300' => 'ppe', 'Prupe.4G048000' => 'ppe', 'Prupe.4G080400' => 'ppe', 'Prupe.4G181200' => 'ppe', 'Prupe.8G056900' => 'ppe', 'Prupe.8G168700' => 'ppe', 'Psat1g189080' => 'psa', 'Psat1g204760' => 'psa', 'Psat4g175560' => 'psa', 'Psat4g177720' => 'psa', 'Psat5g244240' => 'psa', 'Psat6g010720' => 'psa', 'Psat6g187200' => 'psa', 'Psat7g072040' => 'psa', 'PSO017G3501' => 'pso', 'PSO063G2148' => 'pso', 'PSO063G5608' => 'pso', 'PSO210G6392' => 'pso', 'PSO541G2319' => 'pso', 'PSO541G2836' => 'pso', 'PSO541G4012' => 'pso', 'PSO541G6253' => 'pso', 'PSO675G0580' => 'pso', 'PSO675G0856' => 'pso', 'PSO675G5635' => 'pso', 'PSO675G9157' => 'pso', 'PSO832G1660' => 'pso', 'PSO832G1969' => 'pso', 'QL02p007186' => 'qlo', 'QL02p033904' => 'qlo', 'QL03p064391' => 'qlo', 'QL05p040593' => 'qlo', 'QL05p058242' => 'qlo', 'QL08p021825' => 'qlo', 'QL11p004981' => 'qlo', 'RcHm_v2.0_Chr1g0318301' => 'rch', 'RcHm_v2.0_Chr4g0418501' => 'rch', 'RcHm_v2.0_Chr4g0439971' => 'rch', 'RcHm_v2.0_Chr5g0008541' => 'rch', 'RcHm_v2.0_Chr5g0014101' => 'rch', 'RcHm_v2.0_Chr5g0014131' => 'rch', 'RcHm_v2.0_Chr5g0033621' => 'rch', 'RcHm_v2.0_Chr6g0272041' => 'rch', 'RcHm_v2.0_Chr6g0278831' => 'rch', 'Rhsim02G0130400' => 'rsi', 'Rhsim02G0171100' => 'rsi', 'Rhsim05G0053000' => 'rsi', 'Rhsim05G0053100' => 'rsi', 'Rhsim06G0096500' => 'rsi', 'Rhsim06G0096600' => 'rsi', 'Rhsim06G0199100' => 'rsi', 'Rhsim12G0062300' => 'rsi', 'Rhsim12G0062800' => 'rsi', 'Sabra02G0118600' => 'sbr', 'Sabra04G0027300' => 'sbr', 'Sabra04G0119500' => 'sbr', 'Sabra08G0112500' => 'sbr', 'Sabra11G0036800' => 'sbr', 'Sabra11G0103800' => 'sbr', 'Sabra13G0096300' => 'sbr', 'Sabra16G0262300' => 'sbr', 'Sabra18G0091700' => 'sbr', 'Sabra19G0095400' => 'sbr', 'SalBow6G3080' => 'sbo', 'SalBow7G1157' => 'sbo', 'SalBow7G2123' => 'sbo', 'SalBow7G2285' => 'sbo', 'SalBow7G3537' => 'sbo', 'SalBow8G2947' => 'sbo', 'SalBow8G4463' => 'sbo', 'SalBow8G5466' => 'sbo', 'Sc01g0001750' => 'sci', 'Sc02g0006640' => 'sci', 'Sc02g0006670' => 'sci', 'Sc04g0008220' => 'sci', 'Sc05g0006190' => 'sci', 'Sc08g0002760' => 'sci', 'Sc17g0006170' => 'sci', 'Sc22g0002050' => 'sci', 'Sc23g0001190' => 'sci', 'Sc24g0000980' => 'sci', 'Sed0006245' => 'sed', 'Sed0007543' => 'sed', 'Sed0009411' => 'sed', 'Sed0010765' => 'sed', 'Sed0012944' => 'sed', 'Sed0014682' => 'sed', 'Sed0016174' => 'sed', 'Sed0016796' => 'sed', 'Sed0020317' => 'sed', 'Sed0021467' => 'sed', 'SEGI_01316' => 'sgi', 'SEGI_03374' => 'sgi', 'SEGI_16265' => 'sgi', 'SEGI_18569' => 'sgi', 'SEGI_20351' => 'sgi', 'SEGI_26395' => 'sgi', 'SEGI_29469' => 'sgi', 'SEGI_34771' => 'sgi', 'SEGI_36769' => 'sgi', 'SEGI_37139' => 'sgi', 'SGA_v2.0_scaffold100G29687' => 'sas', 'SGA_v2.0_scaffold118G32472' => 'sas', 'SGA_v2.0_scaffold14G07051' => 'sas', 'SGA_v2.0_scaffold183G39845' => 'sas', 'SGA_v2.0_scaffold1G00174' => 'sas', 'SGA_v2.0_scaffold22G09714' => 'sas', 'SGA_v2.0_scaffold333G48992' => 'sas', 'SGA_v2.0_scaffold46G17491' => 'sas', 'SGA_v2.0_scaffold49G18294' => 'sas', 'SGA_v2.0_scaffold63G21658' => 'sas', 'SHI01741' => 'shi', 'SHI05771' => 'shi', 'SHI18077' => 'shi', 'SHI20525' => 'shi', 'SHI20527' => 'shi', 'SHI20528' => 'shi', 'SMO172G0185' => 'smo', 'SMO198G0020' => 'smo', 'SMO351G0006' => 'smo', 'SMO356G0118' => 'smo', 'SMO358G0296' => 'smo', 'SMO367G0079' => 'smo', 'SMO367G1277' => 'smo', 'Solyc01g014220.3' => 'sly', 'Solyc01g111770.2' => 'sly', 'Solyc02g078180.3' => 'sly', 'Solyc03g006430.3' => 'sly', 'Solyc03g006456.1' => 'sly', 'Solyc03g079860.2' => 'sly', 'Solyc04g079770.3' => 'sly', 'Solyc05g007430.4' => 'sly', 'Solyc07g063150.3' => 'sly', 'Solyc08g016620.3' => 'sly', 'Solyc09g057590.3' => 'sly', 'Solyc09g057600.1' => 'sly', 'Solyc10g009050.3' => 'sly', 'Solyc11g017420.2' => 'sly', 'Sopen01g053810' => 'spe', 'Sopen02g023040' => 'spe', 'Sopen03g002440' => 'spe', 'Sopen04g033350' => 'spe', 'Sopen05g003310' => 'spe', 'Sopen07g004050' => 'spe', 'Sopen07g031340' => 'spe', 'Sopen08g006990' => 'spe', 'Sopen10g004830' => 'spe', 'Sopen11g009370' => 'spe', 'Sp1g24450' => 'spa', 'Sp1g29670' => 'spa', 'Sp1g39600' => 'spa', 'Sp2g11080' => 'spa', 'Sp2g13970' => 'spa', 'Sp4g16130' => 'spa', 'Sp6g13080' => 'spa', 'Sp7g37270' => 'spa', 'TAR371G0065' => 'tar', 'TAR376G0340' => 'tar', 'TAR376G0435' => 'tar', 'TAR381G0002' => 'tar', 'TAR381G1236' => 'tar', 'TAR624G0055' => 'tar', 'TAR624G0324' => 'tar', 'TAR624G0696' => 'tar', 'TAR624G0906' => 'tar', 'TAR625G0107' => 'tar', 'TAR626G0015' => 'tar', 'TAR626G1356' => 'tar', 'TAR627G0888' => 'tar', 'TAR628G0399' => 'tar', 'TAR628G1327' => 'tar', 'TAR629G2831' => 'tar', 'TAR629G2874' => 'tar', 'TAR633G1432' => 'tar', 'TAR633G2771' => 'tar', 'THA.LOC104803394' => 'tha', 'THA.LOC104805153' => 'tha', 'THA.LOC104806784' => 'tha', 'THA.LOC104810473' => 'tha', 'THA.LOC104813100' => 'tha', 'THA.LOC104814215' => 'tha', 'THA.LOC104815554' => 'tha', 'THA.LOC104820544' => 'tha', 'THA.LOC104824754' => 'tha', 'THA.LOC104827717' => 'tha', 'Thecc.02G031400' => 'tca', 'Thecc.02G055900' => 'tca', 'Thecc.02G350800' => 'tca', 'Thecc.06G150900' => 'tca', 'Thecc.06G186600' => 'tca', 'Thecc.07G089600' => 'tca', 'Thecc.08G020400' => 'tca', 'Thecc.08G182100' => 'tca', 'Thhalv10000873m.g' => 'esa', 'Thhalv10004185m.g' => 'esa', 'Thhalv10006981m.g' => 'esa', 'Thhalv10007204m.g' => 'esa', 'Thhalv10011374m.g' => 'esa', 'Thhalv10013482m.g' => 'esa', 'Thhalv10017801m.g' => 'esa', 'Thhalv10024983m.g' => 'esa', 'TPR.G12072' => 'tpr', 'TPR.G15769' => 'tpr', 'TPR.G16504' => 'tpr', 'TPR.G16506' => 'tpr', 'TPR.G24345' => 'tpr', 'TPR.G26666' => 'tpr', 'TPR.G27320' => 'tpr', 'TPR.G31819' => 'tpr', 'TPR.G38879' => 'tpr', 'TPR.G39015' => 'tpr', 'TPR.G8819' => 'tpr', 'TWI09G0924' => 'twi', 'TWI12G0811' => 'twi', 'TWI12G1294' => 'twi', 'TWI31G0150' => 'twi', 'TWI36G1262' => 'twi', 'TWI38G1287' => 'twi', 'TWI38G1633' => 'twi', 'TWI38G1982' => 'twi', 'TWI39G0116' => 'twi', 'TWI60G1011' => 'twi', 'TWI63G0171' => 'twi', 'TWI73G0839' => 'twi', 'TWI79G1511' => 'twi', 'unitig_0.g915' => 'ugi', 'unitig_0.g916' => 'ugi', 'unitig_21.g20219' => 'ugi', 'unitig_21.g20416' => 'ugi', 'unitig_578.g16132' => 'ugi', 'unitig_578.g16718' => 'ugi', 'unitig_62.g23481' => 'ugi', 'unitig_744.g24535' => 'ugi', 'unitig_749.g13525' => 'ugi', 'vmacro01248' => 'vma', 'vmacro02290' => 'vma', 'vmacro10946' => 'vma', 'vmacro11865' => 'vma', 'vmacro12493' => 'vma', 'vmacro17322' => 'vma', 'vmacro21599' => 'vma', 'vmacro23041' => 'vma', 'VMungo0251G0004' => 'vmu', 'VMungo0251G2639' => 'vmu', 'VMungo0251G2967' => 'vmu', 'VMungo0540G0864' => 'vmu', 'VMungo0540G1569' => 'vmu', 'VMungo0647G0317' => 'vmu', 'VMungo0720G1373' => 'vmu', 'VMungo0720G1508' => 'vmu', 'VMungo1080G0485' => 'vmu', 'VMungo1215G3177' => 'vmu', 'Zm00001eb112600' => 'zma', 'Zm00001eb120220' => 'zma', 'Zm00001eb153240' => 'zma', 'Zm00001eb168880' => 'zma', 'Zm00001eb213920' => 'zma', 'Zm00001eb228280' => 'zma', 'Zm00001eb254580' => 'zma', 'Zm00001eb272180' => 'zma', 'Zm00001eb293190' => 'zma', 'Zm00001eb322930' => 'zma', 'Zm00001eb353360' => 'zma', 'Zm00001eb353390' => 'zma', 'Zm00001eb353430' => 'zma', 'Zm00001eb353440' => 'zma', 'Zm00001eb353780' => 'zma' ) $gf_id = 'HOM05D000499' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000499' ) $data_identifier = 'HOM05D000499' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 29, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 12, 'amhyb' => (int) 8, 'aly' => (int) 12, 'aox' => (int) 9, 'arhy' => (int) 26, 'ath' => (int) 8, 'atr' => (int) 7, 'acertr' => (int) 10, 'cqu' => (int) 15, 'bca' => (int) 29, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 11, 'cansat' => (int) 8, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 9, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 8, 'cpa' => (int) 10, 'csa' => (int) 7, 'camsi' => (int) 20, 'dca' => (int) 8, 'din' => (int) 12, 'dzi' => (int) 14, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 6, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 38, 'gra' => (int) 16, 'vvi' => (int) 8, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 5, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 11, 'lja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 11, 'mpo' => (int) 3, 'mbi' => (int) 14, 'mdo' => (int) 14, 'mtr' => (int) 8, 'cme' => (int) 9, 'egut' => (int) 9, 'ama' => (int) 11, 'nta' => (int) 17, 'nnu' => (int) 11, 'oeu' => (int) 18, 'osa' => (int) 8, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 6, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 9, 'rsi' => (int) 9, 'sbr' => (int) 10, 'sbo' => (int) 8, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 10, 'sas' => (int) 10, 'shi' => (int) 6, 'smo' => (int) 7, 'sly' => (int) 14, 'spe' => (int) 10, 'spa' => (int) 8, 'tar' => (int) 19, 'tha' => (int) 10, 'tca' => (int) 8, 'esa' => (int) 8, 'tpr' => (int) 11, 'twi' => (int) 13, 'ugi' => (int) 9, 'vma' => (int) 8, 'vmu' => (int) 10, 'zma' => (int) 15 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb353780' $species_info = array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ) $local_species = 'nnu' $disabled = '' $selected = '' $num_hits = (int) 0
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000499', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1066', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p29780' => 'bna', 'A02p33180' => 'bna', 'A03p16470' => 'bna', 'A03p66010' => 'bna', 'A04p25970' => 'bna', 'A06p01270' => 'bna', 'A06p46080' => 'bna', 'A07p11400' => 'bna', 'A08p01840' => 'bna', 'A08p08230' => 'bna', 'A08p25740' => 'bna', 'A09p32070' => 'bna', 'A09p37830' => 'bna', 'A09p42840' => 'bna', 'A09p42850' => 'bna', 'Aa31LG10G2060' => 'aar', 'Aa31LG2G7410' => 'aar', 'Aa31LG6G10200' => 'aar', 'Aa31LG6G16680' => 'aar', 'Aa31LG6G8470' => 'aar', 'Aa31LG9G12730' => 'aar', 'Aa31LG9G13680' => 'aar', 'Aa31LG9G14920' => 'aar', 'Aa31LG9G6650' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4977' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5467' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3254' => 'aag', 'Actinidia02578' => 'ach', 'Actinidia07693' => 'ach', 'Actinidia08413' => 'ach', 'Actinidia08414' => 'ach', 'Actinidia15289' => 'ach', 'Actinidia19871' => 'ach', 'Actinidia21475' => 'ach', 'Actinidia22576' => 'ach', 'Actinidia28327' => 'ach', 'Actinidia32491' => 'ach', 'Actinidia39463' => 'ach', 'Actinidia39571' => 'ach', 'Ah.01g013750' => 'amhyb', 'Ah.01g023210' => 'amhyb', 'Ah.04g164850' => 'amhyb', 'Ah.05g178060' => 'amhyb', 'Ah.07g204270' => 'amhyb', 'Ah.07g208480' => 'amhyb', 'Ah.09g237410' => 'amhyb', 'Ah.14g089460' => 'amhyb', 'AL1G41790' => 'aly', 'AL1G49050' => 'aly', 'AL1G53810' => 'aly', 'AL1G61400' => 'aly', 'AL4G18580' => 'aly', 'AL5G12510' => 'aly', 'AL5G12540' => 'aly', 'AL6G43230' => 'aly', 'AL7G10370' => 'aly', 'AL7G19250' => 'aly', 'AL8G12240' => 'aly', 'AL8G18540' => 'aly', 'Aqoxy1G02409' => 'aox', 'Aqoxy2G03993' => 'aox', 'Aqoxy3G03357' => 'aox', 'Aqoxy4G00785' => 'aox', 'Aqoxy5G02598' => 'aox', 'Aqoxy6G00132' => 'aox', 'Aqoxy7G01776' => 'aox', 'Aqoxy7G02316' => 'aox', 'Aqoxy7G03973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.12AFKW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B8730' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27IQR1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3F75VG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3RE0GA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41TCQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.527VTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FIR39' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5W8UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DA38EV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ63HS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H1I32C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HC27T5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4M8AP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7N3CZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9UVDZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LS1NQA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT1D4B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SKC4TM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCFV76' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF9Q1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQWD9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1ZM88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WE07RT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YCK7VH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJE6Q6' => 'arhy', 'AT1G28240' => 'ath', 'AT1G34550' => 'ath', 'AT1G53040' => 'ath', 'AT2G02910' => 'ath', 'AT4G09630' => 'ath', 'AT4G38500' => 'ath', 'AT5G42660' => 'ath', 'AT5G46220' => 'ath', 'ATR0152G026' => 'atr', 'ATR0564G343' => 'atr', 'ATR0706G151' => 'atr', 'ATR0733G207' => 'atr', 'ATR0751G234' => 'atr', 'ATR0807G048' => 'atr', 'ATR1091G084' => 'atr', 'Atru.chr10.1229' => 'acertr', 'Atru.chr10.1230' => 'acertr', 'Atru.chr10.1874' => 'acertr', 'Atru.chr11.1808' => 'acertr', 'Atru.chr13.1795' => 'acertr', 'Atru.chr13.570' => 'acertr', 'Atru.chr2.2608' => 'acertr', 'Atru.chr2.2609' => 'acertr', 'Atru.chr5.3428' => 'acertr', 'Atru.chr8.1171' => 'acertr', 'AUR62004651' => 'cqu', 'AUR62008675' => 'cqu', 'AUR62010014' => 'cqu', 'AUR62013004' => 'cqu', 'AUR62014825' => 'cqu', 'AUR62015015' => 'cqu', 'AUR62015151' => 'cqu', 'AUR62017020' => 'cqu', 'AUR62019422' => 'cqu', 'AUR62023570' => 'cqu', 'AUR62025571' => 'cqu', 'AUR62029098' => 'cqu', 'AUR62033863' => 'cqu', 'AUR62034296' => 'cqu', 'AUR62040075' => 'cqu', 'BcaB02g07334' => 'bca', 'BcaB02g10575' => 'bca', 'BcaB03g12119' => 'bca', 'BcaB03g12120' => 'bca', 'BcaB03g13945' => 'bca', 'BcaB04g17123' => 'bca', 'BcaB04g17867' => 'bca', 'BcaB04g19839' => 'bca', 'BcaB07g30317' => 'bca', 'BcaB07g32432' => 'bca', 'BcaB07g33362' => 'bca', 'BcaB08g36611' => 'bca', 'BcaC01g00028' => 'bca', 'BcaC01g01356' => 'bca', 'BcaC01g02034' => 'bca', 'BcaC01g06051' => 'bca', 'BcaC03g16839' => 'bca', 'BcaC03g17176' => 'bca', 'BcaC05g26829' => 'bca', 'BcaC06g31490' => 'bca', 'BcaC06g35344' => 'bca', 'BcaC06g36570' => 'bca', 'BcaC07g37537' => 'bca', 'BcaC08g43491' => 'bca', 'BcaC08g43773' => 'bca', 'BcaNung00234' => 'bca', 'BcaNung01982' => 'bca', 'BcaNung03707' => 'bca', 'BcaNung06454' => 'bca', 'BolC2t10762H' => 'bol', 'BolC2t11191H' => 'bol', 'BolC3t14322H' => 'bol', 'BolC3t19747H' => 'bol', 'BolC3t21425H' => 'bol', 'BolC4t27800H' => 'bol', 'BolC5t31423H' => 'bol', 'BolC6t35951H' => 'bol', 'BolC6t36282H' => 'bol', 'BolC7t40678H' => 'bol', 'BolC7t40679H' => 'bol', 'BolC7t42222H' => 'bol', 'BolC7t43492H' => 'bol', 'BolC7t46785H' => 'bol', 'BolC8t47853H' => 'bol', 'BolC9t56805H' => 'bol', 'BraA02t08000Z' => 'bra', 'BraA02t08341Z' => 'bra', 'BraA03t10936Z' => 'bra', 'BraA03t15657Z' => 'bra', 'BraA04t18100Z' => 'bra', 'BraA05t20523Z' => 'bra', 'BraA06t23353Z' => 'bra', 'BraA06t27473Z' => 'bra', 'BraA06t27769Z' => 'bra', 'BraA07t28928Z' => 'bra', 'BraA08t32236Z' => 'bra', 'BraA08t32841Z' => 'bra', 'BraA08t34524Z' => 'bra', 'BraA09t38742Z' => 'bra', 'BraA09t39295Z' => 'bra', 'C02p47180' => 'bna', 'C02p50990' => 'bna', 'C03p19360' => 'bna', 'C03p74950' => 'bna', 'C03p91000' => 'bna', 'C04p63260' => 'bna', 'C05p27050' => 'bna', 'C06p08750' => 'bna', 'C06p11490' => 'bna', 'C07p02820' => 'bna', 'C07p17180' => 'bna', 'C07p29440' => 'bna', 'C07p63730' => 'bna', 'C09p39260' => 'bna', 'CAN.G1164.34' => 'can', 'CAN.G1164.39' => 'can', 'CAN.G1530.3' => 'can', 'CAN.G162.61' => 'can', 'CAN.G176.6' => 'can', 'CAN.G289.49' => 'can', 'CAN.G370.21' => 'can', 'CAN.G370.22' => 'can', 'CAN.G371.117' => 'can', 'CAN.G58.37' => 'can', 'CAN.G588.98' => 'can', 'CANSAT21G2266' => 'cansat', 'CANSAT25G2799' => 'cansat', 'CANSAT35G0862' => 'cansat', 'CANSAT35G1704' => 'cansat', 'CANSAT35G1760' => 'cansat', 'CANSAT56G3971' => 'cansat', 'CANSAT56G4116' => 'cansat', 'CANSAT80G1259' => 'cansat', 'CARHR027730' => 'chi', 'CARHR033880' => 'chi', 'CARHR043270' => 'chi', 'CARHR145330' => 'chi', 'CARHR145340' => 'chi', 'CARHR175570' => 'chi', 'CARHR181570' => 'chi', 'CARHR258470' => 'chi', 'CARHR260490' => 'chi', 'CARHR294220' => 'chi', 'Carub.0001s2668' => 'cru', 'Carub.0001s3257' => 'cru', 'Carub.0001s4220' => 'cru', 'Carub.0005s0179' => 'cru', 'Carub.0006s2807' => 'cru', 'Carub.0007s0039' => 'cru', 'Carub.0008s0169' => 'cru', 'Carub.0008s0636' => 'cru', 'Ca_00338_v3' => 'car', 'Ca_00542_v3' => 'car', 'Ca_01844_v3' => 'car', 'Ca_10611_v3' => 'car', 'Ca_13326_v3' => 'car', 'Ca_17944_v3' => 'car', 'Ca_18546_v3' => 'car', 'Ca_24219_v3' => 'car', 'Ca_29972_v3' => 'car', 'CBR_g3681' => 'cbr', 'CBR_g40021' => 'cbr', 'Cc01_g08140' => 'ccan', 'Cc02_g13410' => 'ccan', 'Cc02_g37480' => 'ccan', 'Cc05_g12030' => 'ccan', 'Cc09_g03370' => 'ccan', 'Cc09_g10300' => 'ccan', 'Cc10_g03530' => 'ccan', 'Cc10_g11380' => 'ccan', 'CDE01G0176' => 'cde', 'CDE02G0675' => 'cde', 'CDE02G0942' => 'cde', 'CDE02G1153' => 'cde', 'CDE02G4177' => 'cde', 'CDE04G2117' => 'cde', 'CDE04G2736' => 'cde', 'CDE08G1161' => 'cde', 'CDE09G1238' => 'cde', 'Cfa000467' => 'cfa', 'Cfa000947' => 'cfa', 'Cfa004969' => 'cfa', 'Cfa005284' => 'cfa', 'Cfa008993' => 'cfa', 'Cfa018187' => 'cfa', 'Cfa018454' => 'cfa', 'Cfa020585' => 'cfa', 'Ciclev10000424m.g' => 'ccl', 'Ciclev10003605m.g' => 'ccl', 'Ciclev10007828m.g' => 'ccl', 'Ciclev10014620m.g' => 'ccl', 'Ciclev10015169m.g' => 'ccl', 'Ciclev10018291m.g' => 'ccl', 'Ciclev10028256m.g' => 'ccl', 'Ciclev10033822m.g' => 'ccl', 'CiPaw.05G060300' => 'cil', 'CiPaw.05G085000' => 'cil', 'CiPaw.06G083700' => 'cil', 'CiPaw.06G120300' => 'cil', 'CiPaw.09G060500' => 'cil', 'CiPaw.09G123800' => 'cil', 'CiPaw.11G169700' => 'cil', 'CiPaw.12G118300' => 'cil', 'CiPaw.15G071000' => 'cil', 'CiPaw.15G081900' => 'cil', 'ClCG01G024610' => 'cla', 'ClCG03G006070' => 'cla', 'ClCG05G019250' => 'cla', 'ClCG09G009500' => 'cla', 'ClCG11G008200' => 'cla', 'ClCG11G018080' => 'cla', 'COL.COLO4_17373' => 'col', 'COL.COLO4_22994' => 'col', 'COL.COLO4_26389' => 'col', 'COL.COLO4_27170' => 'col', 'COL.COLO4_31074' => 'col', 'COL.COLO4_31465' => 'col', 'COL.COLO4_36438' => 'col', 'COL.COLO4_36439' => 'col', 'Cpa.g.c38781' => 'cpa', 'Cpa.g.sc128.12' => 'cpa', 'Cpa.g.sc166.7' => 'cpa', 'Cpa.g.sc166.8' => 'cpa', 'Cpa.g.sc20.111' => 'cpa', 'Cpa.g.sc27.31' => 'cpa', 'Cpa.g.sc64.36' => 'cpa', 'Cpa.g.sc64.37' => 'cpa', 'Cpa.g.sc66.49' => 'cpa', 'Cpa.g.sc80.64' => 'cpa', 'CsaV3_1G012320' => 'csa', 'CsaV3_2G008480' => 'csa', 'CsaV3_2G033450' => 'csa', 'CsaV3_3G044830' => 'csa', 'CsaV3_4G033710' => 'csa', 'CsaV3_6G051730' => 'csa', 'CsaV3_7G025350' => 'csa', 'CSS0001067' => 'camsi', 'CSS0005996' => 'camsi', 'CSS0006590' => 'camsi', 'CSS0009673' => 'camsi', 'CSS0010201' => 'camsi', 'CSS0010549' => 'camsi', 'CSS0011364' => 'camsi', 'CSS0014473' => 'camsi', 'CSS0014961' => 'camsi', 'CSS0020191' => 'camsi', 'CSS0021165' => 'camsi', 'CSS0022306' => 'camsi', 'CSS0030591' => 'camsi', 'CSS0030696' => 'camsi', 'CSS0032653' => 'camsi', 'CSS0037487' => 'camsi', 'CSS0041102' => 'camsi', 'CSS0041261' => 'camsi', 'CSS0046246' => 'camsi', 'CSS0049256' => 'camsi', 'DCAR_004075' => 'dca', 'DCAR_011538' => 'dca', 'DCAR_019553' => 'dca', 'DCAR_020952' => 'dca', 'DCAR_021739' => 'dca', 'DCAR_027407' => 'dca', 'DCAR_027913' => 'dca', 'DCAR_028066' => 'dca', 'Dinv05899' => 'din', 'Dinv07563' => 'din', 'Dinv08010' => 'din', 'Dinv14125' => 'din', 'Dinv20172' => 'din', 'Dinv30743' => 'din', 'Dinv31229' => 'din', 'Dinv34162' => 'din', 'Dinv36028' => 'din', 'Dinv39368' => 'din', 'Dinv40565' => 'din', 'Dinv41706' => 'din', 'Duzib052G0089' => 'dzi', 'Duzib116G0641' => 'dzi', 'Duzib132G0069' => 'dzi', 'Duzib132G1219' => 'dzi', 'Duzib147G0278' => 'dzi', 'Duzib160G0480' => 'dzi', 'Duzib170G0661' => 'dzi', 'Duzib177G0591' => 'dzi', 'Duzib187G1353' => 'dzi', 'Duzib192G0858' => 'dzi', 'Duzib192G0883' => 'dzi', 'Duzib213G0506' => 'dzi', 'Duzib235G0289' => 'dzi', 'Duzib251G0422' => 'dzi', 'ECA232G3898' => 'eca', 'ECA233G5950' => 'eca', 'ECA234G1699' => 'eca', 'ECA234G2421' => 'eca', 'ECA236G0426' => 'eca', 'ECA236G4331' => 'eca', 'ECA248G2573' => 'eca', 'EL10Ac1g00077' => 'bvu', 'EL10Ac1g01746' => 'bvu', 'EL10Ac2g03464' => 'bvu', 'EL10Ac4g08176' => 'bvu', 'EL10Ac7g17521' => 'bvu', 'EL10Ac8g20386' => 'bvu', 'EL10Ac9g21343' => 'bvu', 'EL10Ac9g22688' => 'bvu', 'Eucgr.B03434' => 'egr', 'Eucgr.D00618' => 'egr', 'Eucgr.E02395' => 'egr', 'Eucgr.F01129' => 'egr', 'Eucgr.F02622' => 'egr', 'Eucgr.F04207' => 'egr', 'FAN01G0570' => 'fan', 'FAN03G3351' => 'fan', 'FAN06G3702' => 'fan', 'FAN07G2149' => 'fan', 'FAN10G3758' => 'fan', 'FAN11G1170' => 'fan', 'FAN11G2050' => 'fan', 'FAN11G2724' => 'fan', 'FAN12G1700' => 'fan', 'FAN12G2028' => 'fan', 'FAN15G1160' => 'fan', 'FAN15G3063' => 'fan', 'FAN16G2540' => 'fan', 'FAN16G3077' => 'fan', 'FAN16G3624' => 'fan', 'FAN17G0221' => 'fan', 'FAN20G2492' => 'fan', 'FAN20G2905' => 'fan', 'FAN21G0548' => 'fan', 'FAN21G1300' => 'fan', 'FAN22G0077' => 'fan', 'FAN22G1315' => 'fan', 'FAN24G1280' => 'fan', 'FAN24G1445' => 'fan', 'FAN24G3527' => 'fan', 'FAN25G0464' => 'fan', 'FAN25G2885' => 'fan', 'FAN25G3270' => 'fan', 'FAN27G1101' => 'fan', 'FAN27G2846' => 'fan', 'FAN27G3524' => 'fan', 'FvH4_2g11770' => 'fve', 'FvH4_2g15630' => 'fve', 'FvH4_3g05570' => 'fve', 'FvH4_3g09110' => 'fve', 'FvH4_3g19940' => 'fve', 'FvH4_4g04821' => 'fve', 'FvH4_4g31480' => 'fve', 'FvH4_7g01740' => 'fve', 'Glyma.05G130400' => 'gma', 'Glyma.05G156400' => 'gma', 'Glyma.07G197000' => 'gma', 'Glyma.08G085151' => 'gma', 'Glyma.08G114500' => 'gma', 'Glyma.08G300400' => 'gma', 'Glyma.10G215800' => 'gma', 'Glyma.12G224400' => 'gma', 'Glyma.13G179300' => 'gma', 'Glyma.13G218151' => 'gma', 'Glyma.13G238800' => 'gma', 'Glyma.13G276900' => 'gma', 'Glyma.14G078200' => 'gma', 'Glyma.15G074500' => 'gma', 'Glyma.15G094100' => 'gma', 'Glyma.17G247200' => 'gma', 'Glyma.18G120100' => 'gma', 'Glyma.20G176000' => 'gma', 'Gohir.A01G063600' => 'ghi', 'Gohir.A01G170301' => 'ghi', 'Gohir.A02G060500' => 'ghi', 'Gohir.A05G133850' => 'ghi', 'Gohir.A05G161400' => 'ghi', 'Gohir.A06G012900' => 'ghi', 'Gohir.A06G035901' => 'ghi', 'Gohir.A06G127100' => 'ghi', 'Gohir.A06G210500' => 'ghi', 'Gohir.A08G008650' => 'ghi', 'Gohir.A09G072700' => 'ghi', 'Gohir.A09G088301' => 'ghi', 'Gohir.A10G040600' => 'ghi', 'Gohir.A12G036300' => 'ghi', 'Gohir.A12G143350' => 'ghi', 'Gohir.A12G165500' => 'ghi', 'Gohir.A13G145700' => 'ghi', 'Gohir.D01G050000' => 'ghi', 'Gohir.D01G051366' => 'ghi', 'Gohir.D01G161350' => 'ghi', 'Gohir.D02G065900' => 'ghi', 'Gohir.D05G164200' => 'ghi', 'Gohir.D05G355500' => 'ghi', 'Gohir.D06G010400' => 'ghi', 'Gohir.D06G111250' => 'ghi', 'Gohir.D06G132000' => 'ghi', 'Gohir.D06G210500' => 'ghi', 'Gohir.D07G165675' => 'ghi', 'Gohir.D08G062240' => 'ghi', 'Gohir.D08G086101' => 'ghi', 'Gohir.D08G138060' => 'ghi', 'Gohir.D09G072300' => 'ghi', 'Gohir.D10G041400' => 'ghi', 'Gohir.D11G191020' => 'ghi', 'Gohir.D11G212066' => 'ghi', 'Gohir.D12G036300' => 'ghi', 'Gohir.D12G168600' => 'ghi', 'Gohir.D13G150600' => 'ghi', 'Gorai.001G057300' => 'gra', 'Gorai.002G069900' => 'gra', 'Gorai.002G200000' => 'gra', 'Gorai.003G067600' => 'gra', 'Gorai.005G074800' => 'gra', 'Gorai.006G087300' => 'gra', 'Gorai.008G037500' => 'gra', 'Gorai.008G181400' => 'gra', 'Gorai.009G169400' => 'gra', 'Gorai.009G387900' => 'gra', 'Gorai.010G013300' => 'gra', 'Gorai.010G153800' => 'gra', 'Gorai.010G255800' => 'gra', 'Gorai.011G043700' => 'gra', 'Gorai.011G198900' => 'gra', 'Gorai.013G168400' => 'gra', 'GSVIVG01005212001' => 'vvi', 'GSVIVG01006163001' => 'vvi', 'GSVIVG01009625001' => 'vvi', 'GSVIVG01014338001' => 'vvi', 'GSVIVG01020005001' => 'vvi', 'GSVIVG01021450001' => 'vvi', 'GSVIVG01023975001' => 'vvi', 'GSVIVG01034490001' => 'vvi', 'HanXRQChr04g0112071' => 'han', 'HanXRQChr05g0131151' => 'han', 'HanXRQChr09g0262371' => 'han', 'HanXRQChr09g0268401' => 'han', 'HanXRQChr10g0279241' => 'han', 'HanXRQChr10g0297961' => 'han', 'HanXRQChr11g0326231' => 'han', 'HanXRQChr11g0328471' => 'han', 'HanXRQChr16g0507941' => 'han', 'HanXRQChr17g0560211' => 'han', 'Haze_02108' => 'cav', 'Haze_02428' => 'cav', 'Haze_05593' => 'cav', 'Haze_06448' => 'cav', 'Haze_09427' => 'cav', 'Haze_12022' => 'cav', 'Haze_17612' => 'cav', 'Haze_17928' => 'cav', 'Hma1.2p1_0032F.1_g019250' => 'hma', 'Hma1.2p1_0163F.1_g072690' => 'hma', 'Hma1.2p1_0265F.1_g106710' => 'hma', 'Hma1.2p1_0286F.1_g113970' => 'hma', 'Hma1.2p1_0363F.1_g136640' => 'hma', 'Hma1.2p1_0584F.1_g183470' => 'hma', 'Hma1.2p1_0885F.1_g232570' => 'hma', 'HPP92_006022' => 'vpl', 'HPP92_007320' => 'vpl', 'HPP92_011521' => 'vpl', 'HPP92_019387' => 'vpl', 'HPP92_024038' => 'vpl', 'Hund05891' => 'sun', 'Hund06450' => 'sun', 'Hund12053' => 'sun', 'Hund16800' => 'sun', 'Hund21222' => 'sun', 'Hund22896' => 'sun', 'Hund23746' => 'sun', 'Hund27083' => 'sun', 'Lalb_Chr02g0141831' => 'lal', 'Lalb_Chr02g0141841' => 'lal', 'Lalb_Chr05g0220411' => 'lal', 'Lalb_Chr06g0162081' => 'lal', 'Lalb_Chr09g0327651' => 'lal', 'Lalb_Chr13g0295051' => 'lal', 'Lalb_Chr15g0086801' => 'lal', 'Lalb_Chr16g0383781' => 'lal', 'Lalb_Chr16g0383791' => 'lal', 'Lalb_Chr18g0055441' => 'lal', 'Lalb_Chr18g0059611' => 'lal', 'Lalb_Chr20g0109661' => 'lal', 'Lalb_Chr20g0109831' => 'lal', 'Lalb_Chr20g0121871' => 'lal', 'Lalb_Chr22g0355361' => 'lal', 'Lalb_Chr25g0286371' => 'lal', 'Lj1A1187G43' => 'lonja', 'Lj1A1205T50' => 'lonja', 'Lj1A800G33' => 'lonja', 'Lj1C1187T7' => 'lonja', 'Lj1C843T11' => 'lonja', 'Lj1g0010940' => 'lja', 'Lj2A288T69' => 'lonja', 'Lj3g0024276' => 'lja', 'Lj4A47T76' => 'lonja', 'Lj4g0005805' => 'lja', 'Lj4g0006097' => 'lja', 'Lj4g0008528' => 'lja', 'Lj4g0024907' => 'lja', 'Lj5g0012472' => 'lja', 'Lj5g0018648' => 'lja', 'Lj6C789G1' => 'lonja', 'Lj6g0004000' => 'lja', 'Lj7A292G67' => 'lonja', 'Lj7A292T64' => 'lonja', 'Lj9A400T58' => 'lonja', 'Lsat_1_v5_gn_1_126181' => 'lsa', 'Lsat_1_v5_gn_4_123041' => 'lsa', 'Lsat_1_v5_gn_4_133620' => 'lsa', 'Lsat_1_v5_gn_4_53221' => 'lsa', 'Lsat_1_v5_gn_4_71961' => 'lsa', 'Lsat_1_v5_gn_7_105241' => 'lsa', 'Lsat_1_v5_gn_7_21361' => 'lsa', 'Lsat_1_v5_gn_7_28860' => 'lsa', 'Lsat_1_v5_gn_7_31260' => 'lsa', 'Lsat_1_v5_gn_8_52801' => 'lsa', 'Manes.02G191400' => 'mes', 'Manes.03G110100' => 'mes', 'Manes.04G071100' => 'mes', 'Manes.05G100500' => 'mes', 'Manes.05G164700' => 'mes', 'Manes.15G087000' => 'mes', 'Manes.15G121500' => 'mes', 'Manes.16G028300' => 'mes', 'Manes.17G046100' => 'mes', 'Manes.17G069800' => 'mes', 'Manes.18G100500' => 'mes', 'Mapoly0002s0109' => 'mpo', 'Mapoly0024s0007' => 'mpo', 'Mapoly0089s0032' => 'mpo', 'MBI04_g42241_MAGBIO' => 'mbi', 'MBI05_g11988_MAGBIO' => 'mbi', 'MBI05_g35452_MAGBIO' => 'mbi', 'MBI07_g30179_MAGBIO' => 'mbi', 'MBI07_g35859_MAGBIO' => 'mbi', 'MBI07_g35860_MAGBIO' => 'mbi', 'MBI07_g37166_MAGBIO' => 'mbi', 'MBI08_g18172_MAGBIO' => 'mbi', 'MBI09_g08441_MAGBIO' => 'mbi', 'MBI13_g01676_MAGBIO' => 'mbi', 'MBI14_g42955_MAGBIO' => 'mbi', 'MBI16_g13161_MAGBIO' => 'mbi', 'MBI17_g27204_MAGBIO' => 'mbi', 'MBI19_g21595_MAGBIO' => 'mbi', 'MD00G1148400' => 'mdo', 'MD02G1301200' => 'mdo', 'MD03G1227800' => 'mdo', 'MD05G1041100' => 'mdo', 'MD05G1124800' => 'mdo', 'MD05G1284000' => 'mdo', 'MD05G1338800' => 'mdo', 'MD05G1338900' => 'mdo', 'MD07G1022800' => 'mdo', 'MD10G1047500' => 'mdo', 'MD10G1127500' => 'mdo', 'MD10G1262300' => 'mdo', 'MD10G1293800' => 'mdo', 'MD16G1074300' => 'mdo', 'Medtr1g021670' => 'mtr', 'Medtr1g096320' => 'mtr', 'Medtr2g013690' => 'mtr', 'Medtr2g019450' => 'mtr', 'Medtr2g085170' => 'mtr', 'Medtr4g088785' => 'mtr', 'Medtr8g055930' => 'mtr', 'Medtr8g085850' => 'mtr', 'MELO3C002605.2' => 'cme', 'MELO3C003891.2' => 'cme', 'MELO3C004012.2' => 'cme', 'MELO3C007134.2' => 'cme', 'MELO3C008118.2' => 'cme', 'MELO3C016700.2' => 'cme', 'MELO3C024127.2' => 'cme', 'MELO3C033361.2' => 'cme', 'MELO3C033362.2' => 'cme', 'Migut.C00430' => 'egut', 'Migut.C01246' => 'egut', 'Migut.E00101' => 'egut', 'Migut.H01486' => 'egut', 'Migut.H01939' => 'egut', 'Migut.K00360' => 'egut', 'Migut.M00910' => 'egut', 'Migut.M01139' => 'egut', 'Migut.N02677' => 'egut', 'MSTRG.13252' => 'ama', 'MSTRG.14701' => 'ama', 'MSTRG.1521' => 'ama', 'MSTRG.15884' => 'ama', 'MSTRG.16242' => 'ama', 'MSTRG.22285' => 'ama', 'MSTRG.22444' => 'ama', 'MSTRG.2349' => 'ama', 'MSTRG.26308' => 'ama', 'MSTRG.28296' => 'ama', 'MSTRG.9895' => 'ama', 'Nitab4.5_0000110g0060' => 'nta', 'Nitab4.5_0000420g0130' => 'nta', 'Nitab4.5_0000422g0030' => 'nta', 'Nitab4.5_0000560g0180' => 'nta', 'Nitab4.5_0000703g0100' => 'nta', 'Nitab4.5_0000786g0200' => 'nta', 'Nitab4.5_0001336g0020' => 'nta', 'Nitab4.5_0001796g0030' => 'nta', 'Nitab4.5_0003348g0060' => 'nta', 'Nitab4.5_0003698g0040' => 'nta', 'Nitab4.5_0003942g0090' => 'nta', 'Nitab4.5_0004775g0070' => 'nta', 'Nitab4.5_0004864g0030' => 'nta', 'Nitab4.5_0005615g0020' => 'nta', 'Nitab4.5_0009288g0030' => 'nta', 'Nitab4.5_0009341g0010' => 'nta', 'Nitab4.5_0009535g0010' => 'nta', 'Nn1g03995' => 'nnu', 'Nn1g04100' => 'nnu', 'Nn1g06530' => 'nnu', 'Nn3g16404' => 'nnu', 'Nn3g17212' => 'nnu', 'Nn3g20776' => 'nnu', 'Nn3g21923' => 'nnu', 'Nn5g27737' => 'nnu', 'Nn5g29461' => 'nnu', 'Nn7g38355' => 'nnu', 'Nn8g39873' => 'nnu', 'Oeu000548.2' => 'oeu', 'Oeu004672.1' => 'oeu', 'Oeu015605.2' => 'oeu', 'Oeu016092.1' => 'oeu', 'Oeu017879.3' => 'oeu', 'Oeu024910.1' => 'oeu', 'Oeu028965.1' => 'oeu', 'Oeu031269.1' => 'oeu', 'Oeu031270.1' => 'oeu', 'Oeu032535.1' => 'oeu', 'Oeu034151.1' => 'oeu', 'Oeu034152.1' => 'oeu', 'Oeu034588.2' => 'oeu', 'Oeu050846.1' => 'oeu', 'Oeu050849.2' => 'oeu', 'Oeu051063.2' => 'oeu', 'Oeu052368.1' => 'oeu', 'Oeu052370.1' => 'oeu', 'Os01g0210400' => 'osa', 'Os01g0304300' => 'osa', 'Os01g0749100' => 'osa', 'Os02g0745800' => 'osa', 'Os03g0769050' => 'osa', 'Os05g0531500' => 'osa', 'Os06g0724300' => 'osa', 'Os11g0198100' => 'osa', 'Peaxi162Scf00069g01425' => 'pax', 'Peaxi162Scf00280g00811' => 'pax', 'Peaxi162Scf00310g00615' => 'pax', 'Peaxi162Scf00362g00542' => 'pax', 'Peaxi162Scf00461g00310' => 'pax', 'Peaxi162Scf00530g00118' => 'pax', 'Peaxi162Scf00541g00057' => 'pax', 'Peaxi162Scf00661g00017' => 'pax', 'Peaxi162Scf00926g00027' => 'pax', 'Peaxi162Scf01064g00263' => 'pax', 'Peaxi162Scf01211g00135' => 'pax', 'PGR004G2336' => 'pgr', 'PGR042G0327' => 'pgr', 'PGR042G1957' => 'pgr', 'PGR042G2003' => 'pgr', 'PGR042G3929' => 'pgr', 'PGR083G1137' => 'pgr', 'PGR083G1364' => 'pgr', 'PGSC0003DMG400003381' => 'stu', 'PGSC0003DMG400003417' => 'stu', 'PGSC0003DMG400008981' => 'stu', 'PGSC0003DMG400012417' => 'stu', 'PGSC0003DMG400012823' => 'stu', 'PGSC0003DMG400016885' => 'stu', 'PGSC0003DMG400022812' => 'stu', 'PGSC0003DMG400029726' => 'stu', 'PGSC0003DMG401009243' => 'stu', 'PGSC0003DMG401031505' => 'stu', 'PGSC0003DMG402031505' => 'stu', 'Phvul.001G017600' => 'pvu', 'Phvul.002G193500' => 'pvu', 'Phvul.002G228900' => 'pvu', 'Phvul.002G236800' => 'pvu', 'Phvul.003G049500' => 'pvu', 'Phvul.005G072000' => 'pvu', 'Phvul.006G164800' => 'pvu', 'Phvul.006G185100' => 'pvu', 'Phvul.007G090000' => 'pvu', 'Potri.001G399800' => 'ptr', 'Potri.002G149900' => 'ptr', 'Potri.004G044100' => 'ptr', 'Potri.004G177600' => 'ptr', 'Potri.009G138000' => 'ptr', 'Potri.010G094000' => 'ptr', 'Potri.011G053000' => 'ptr', 'Potri.011G119300' => 'ptr', 'Potri.013G113700' => 'ptr', 'Potri.018G107800' => 'ptr', 'Potri.019G084100' => 'ptr', 'Pp3c14_23720' => 'ppa', 'Pp3c16_6340' => 'ppa', 'Pp3c23_13420' => 'ppa', 'Pp3c24_2740' => 'ppa', 'Pp3c25_860' => 'ppa', 'Pp3c8_21750' => 'ppa', 'Prupe.1G273000' => 'ppe', 'Prupe.1G273700' => 'ppe', 'Prupe.1G274100' => 'ppe', 'Prupe.2G023300' => 'ppe', 'Prupe.4G048000' => 'ppe', 'Prupe.4G080400' => 'ppe', 'Prupe.4G181200' => 'ppe', 'Prupe.8G056900' => 'ppe', 'Prupe.8G168700' => 'ppe', 'Psat1g189080' => 'psa', 'Psat1g204760' => 'psa', 'Psat4g175560' => 'psa', 'Psat4g177720' => 'psa', 'Psat5g244240' => 'psa', 'Psat6g010720' => 'psa', 'Psat6g187200' => 'psa', 'Psat7g072040' => 'psa', 'PSO017G3501' => 'pso', 'PSO063G2148' => 'pso', 'PSO063G5608' => 'pso', 'PSO210G6392' => 'pso', 'PSO541G2319' => 'pso', 'PSO541G2836' => 'pso', 'PSO541G4012' => 'pso', 'PSO541G6253' => 'pso', 'PSO675G0580' => 'pso', 'PSO675G0856' => 'pso', 'PSO675G5635' => 'pso', 'PSO675G9157' => 'pso', 'PSO832G1660' => 'pso', 'PSO832G1969' => 'pso', 'QL02p007186' => 'qlo', 'QL02p033904' => 'qlo', 'QL03p064391' => 'qlo', 'QL05p040593' => 'qlo', 'QL05p058242' => 'qlo', 'QL08p021825' => 'qlo', 'QL11p004981' => 'qlo', 'RcHm_v2.0_Chr1g0318301' => 'rch', 'RcHm_v2.0_Chr4g0418501' => 'rch', 'RcHm_v2.0_Chr4g0439971' => 'rch', 'RcHm_v2.0_Chr5g0008541' => 'rch', 'RcHm_v2.0_Chr5g0014101' => 'rch', 'RcHm_v2.0_Chr5g0014131' => 'rch', 'RcHm_v2.0_Chr5g0033621' => 'rch', 'RcHm_v2.0_Chr6g0272041' => 'rch', 'RcHm_v2.0_Chr6g0278831' => 'rch', 'Rhsim02G0130400' => 'rsi', 'Rhsim02G0171100' => 'rsi', 'Rhsim05G0053000' => 'rsi', 'Rhsim05G0053100' => 'rsi', 'Rhsim06G0096500' => 'rsi', 'Rhsim06G0096600' => 'rsi', 'Rhsim06G0199100' => 'rsi', 'Rhsim12G0062300' => 'rsi', 'Rhsim12G0062800' => 'rsi', 'Sabra02G0118600' => 'sbr', 'Sabra04G0027300' => 'sbr', 'Sabra04G0119500' => 'sbr', 'Sabra08G0112500' => 'sbr', 'Sabra11G0036800' => 'sbr', 'Sabra11G0103800' => 'sbr', 'Sabra13G0096300' => 'sbr', 'Sabra16G0262300' => 'sbr', 'Sabra18G0091700' => 'sbr', 'Sabra19G0095400' => 'sbr', 'SalBow6G3080' => 'sbo', 'SalBow7G1157' => 'sbo', 'SalBow7G2123' => 'sbo', 'SalBow7G2285' => 'sbo', 'SalBow7G3537' => 'sbo', 'SalBow8G2947' => 'sbo', 'SalBow8G4463' => 'sbo', 'SalBow8G5466' => 'sbo', 'Sc01g0001750' => 'sci', 'Sc02g0006640' => 'sci', 'Sc02g0006670' => 'sci', 'Sc04g0008220' => 'sci', 'Sc05g0006190' => 'sci', 'Sc08g0002760' => 'sci', 'Sc17g0006170' => 'sci', 'Sc22g0002050' => 'sci', 'Sc23g0001190' => 'sci', 'Sc24g0000980' => 'sci', 'Sed0006245' => 'sed', 'Sed0007543' => 'sed', 'Sed0009411' => 'sed', 'Sed0010765' => 'sed', 'Sed0012944' => 'sed', 'Sed0014682' => 'sed', 'Sed0016174' => 'sed', 'Sed0016796' => 'sed', 'Sed0020317' => 'sed', 'Sed0021467' => 'sed', 'SEGI_01316' => 'sgi', 'SEGI_03374' => 'sgi', 'SEGI_16265' => 'sgi', 'SEGI_18569' => 'sgi', 'SEGI_20351' => 'sgi', 'SEGI_26395' => 'sgi', 'SEGI_29469' => 'sgi', 'SEGI_34771' => 'sgi', 'SEGI_36769' => 'sgi', 'SEGI_37139' => 'sgi', 'SGA_v2.0_scaffold100G29687' => 'sas', 'SGA_v2.0_scaffold118G32472' => 'sas', 'SGA_v2.0_scaffold14G07051' => 'sas', 'SGA_v2.0_scaffold183G39845' => 'sas', 'SGA_v2.0_scaffold1G00174' => 'sas', 'SGA_v2.0_scaffold22G09714' => 'sas', 'SGA_v2.0_scaffold333G48992' => 'sas', 'SGA_v2.0_scaffold46G17491' => 'sas', 'SGA_v2.0_scaffold49G18294' => 'sas', 'SGA_v2.0_scaffold63G21658' => 'sas', 'SHI01741' => 'shi', 'SHI05771' => 'shi', 'SHI18077' => 'shi', 'SHI20525' => 'shi', 'SHI20527' => 'shi', 'SHI20528' => 'shi', 'SMO172G0185' => 'smo', 'SMO198G0020' => 'smo', 'SMO351G0006' => 'smo', 'SMO356G0118' => 'smo', 'SMO358G0296' => 'smo', 'SMO367G0079' => 'smo', 'SMO367G1277' => 'smo', 'Solyc01g014220.3' => 'sly', 'Solyc01g111770.2' => 'sly', 'Solyc02g078180.3' => 'sly', 'Solyc03g006430.3' => 'sly', 'Solyc03g006456.1' => 'sly', 'Solyc03g079860.2' => 'sly', 'Solyc04g079770.3' => 'sly', 'Solyc05g007430.4' => 'sly', 'Solyc07g063150.3' => 'sly', 'Solyc08g016620.3' => 'sly', 'Solyc09g057590.3' => 'sly', 'Solyc09g057600.1' => 'sly', 'Solyc10g009050.3' => 'sly', 'Solyc11g017420.2' => 'sly', 'Sopen01g053810' => 'spe', 'Sopen02g023040' => 'spe', 'Sopen03g002440' => 'spe', 'Sopen04g033350' => 'spe', 'Sopen05g003310' => 'spe', 'Sopen07g004050' => 'spe', 'Sopen07g031340' => 'spe', 'Sopen08g006990' => 'spe', 'Sopen10g004830' => 'spe', 'Sopen11g009370' => 'spe', 'Sp1g24450' => 'spa', 'Sp1g29670' => 'spa', 'Sp1g39600' => 'spa', 'Sp2g11080' => 'spa', 'Sp2g13970' => 'spa', 'Sp4g16130' => 'spa', 'Sp6g13080' => 'spa', 'Sp7g37270' => 'spa', 'TAR371G0065' => 'tar', 'TAR376G0340' => 'tar', 'TAR376G0435' => 'tar', 'TAR381G0002' => 'tar', 'TAR381G1236' => 'tar', 'TAR624G0055' => 'tar', 'TAR624G0324' => 'tar', 'TAR624G0696' => 'tar', 'TAR624G0906' => 'tar', 'TAR625G0107' => 'tar', 'TAR626G0015' => 'tar', 'TAR626G1356' => 'tar', 'TAR627G0888' => 'tar', 'TAR628G0399' => 'tar', 'TAR628G1327' => 'tar', 'TAR629G2831' => 'tar', 'TAR629G2874' => 'tar', 'TAR633G1432' => 'tar', 'TAR633G2771' => 'tar', 'THA.LOC104803394' => 'tha', 'THA.LOC104805153' => 'tha', 'THA.LOC104806784' => 'tha', 'THA.LOC104810473' => 'tha', 'THA.LOC104813100' => 'tha', 'THA.LOC104814215' => 'tha', 'THA.LOC104815554' => 'tha', 'THA.LOC104820544' => 'tha', 'THA.LOC104824754' => 'tha', 'THA.LOC104827717' => 'tha', 'Thecc.02G031400' => 'tca', 'Thecc.02G055900' => 'tca', 'Thecc.02G350800' => 'tca', 'Thecc.06G150900' => 'tca', 'Thecc.06G186600' => 'tca', 'Thecc.07G089600' => 'tca', 'Thecc.08G020400' => 'tca', 'Thecc.08G182100' => 'tca', 'Thhalv10000873m.g' => 'esa', 'Thhalv10004185m.g' => 'esa', 'Thhalv10006981m.g' => 'esa', 'Thhalv10007204m.g' => 'esa', 'Thhalv10011374m.g' => 'esa', 'Thhalv10013482m.g' => 'esa', 'Thhalv10017801m.g' => 'esa', 'Thhalv10024983m.g' => 'esa', 'TPR.G12072' => 'tpr', 'TPR.G15769' => 'tpr', 'TPR.G16504' => 'tpr', 'TPR.G16506' => 'tpr', 'TPR.G24345' => 'tpr', 'TPR.G26666' => 'tpr', 'TPR.G27320' => 'tpr', 'TPR.G31819' => 'tpr', 'TPR.G38879' => 'tpr', 'TPR.G39015' => 'tpr', 'TPR.G8819' => 'tpr', 'TWI09G0924' => 'twi', 'TWI12G0811' => 'twi', 'TWI12G1294' => 'twi', 'TWI31G0150' => 'twi', 'TWI36G1262' => 'twi', 'TWI38G1287' => 'twi', 'TWI38G1633' => 'twi', 'TWI38G1982' => 'twi', 'TWI39G0116' => 'twi', 'TWI60G1011' => 'twi', 'TWI63G0171' => 'twi', 'TWI73G0839' => 'twi', 'TWI79G1511' => 'twi', 'unitig_0.g915' => 'ugi', 'unitig_0.g916' => 'ugi', 'unitig_21.g20219' => 'ugi', 'unitig_21.g20416' => 'ugi', 'unitig_578.g16132' => 'ugi', 'unitig_578.g16718' => 'ugi', 'unitig_62.g23481' => 'ugi', 'unitig_744.g24535' => 'ugi', 'unitig_749.g13525' => 'ugi', 'vmacro01248' => 'vma', 'vmacro02290' => 'vma', 'vmacro10946' => 'vma', 'vmacro11865' => 'vma', 'vmacro12493' => 'vma', 'vmacro17322' => 'vma', 'vmacro21599' => 'vma', 'vmacro23041' => 'vma', 'VMungo0251G0004' => 'vmu', 'VMungo0251G2639' => 'vmu', 'VMungo0251G2967' => 'vmu', 'VMungo0540G0864' => 'vmu', 'VMungo0540G1569' => 'vmu', 'VMungo0647G0317' => 'vmu', 'VMungo0720G1373' => 'vmu', 'VMungo0720G1508' => 'vmu', 'VMungo1080G0485' => 'vmu', 'VMungo1215G3177' => 'vmu', 'Zm00001eb112600' => 'zma', 'Zm00001eb120220' => 'zma', 'Zm00001eb153240' => 'zma', 'Zm00001eb168880' => 'zma', 'Zm00001eb213920' => 'zma', 'Zm00001eb228280' => 'zma', 'Zm00001eb254580' => 'zma', 'Zm00001eb272180' => 'zma', 'Zm00001eb293190' => 'zma', 'Zm00001eb322930' => 'zma', 'Zm00001eb353360' => 'zma', 'Zm00001eb353390' => 'zma', 'Zm00001eb353430' => 'zma', 'Zm00001eb353440' => 'zma', 'Zm00001eb353780' => 'zma' ), 'gf_id' => 'HOM05D000499', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000499' ), 'data_identifier' => 'HOM05D000499', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000499', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1066', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p29780' => 'bna', 'A02p33180' => 'bna', 'A03p16470' => 'bna', 'A03p66010' => 'bna', 'A04p25970' => 'bna', 'A06p01270' => 'bna', 'A06p46080' => 'bna', 'A07p11400' => 'bna', 'A08p01840' => 'bna', 'A08p08230' => 'bna', 'A08p25740' => 'bna', 'A09p32070' => 'bna', 'A09p37830' => 'bna', 'A09p42840' => 'bna', 'A09p42850' => 'bna', 'Aa31LG10G2060' => 'aar', 'Aa31LG2G7410' => 'aar', 'Aa31LG6G10200' => 'aar', 'Aa31LG6G16680' => 'aar', 'Aa31LG6G8470' => 'aar', 'Aa31LG9G12730' => 'aar', 'Aa31LG9G13680' => 'aar', 'Aa31LG9G14920' => 'aar', 'Aa31LG9G6650' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4977' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5467' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3254' => 'aag', 'Actinidia02578' => 'ach', 'Actinidia07693' => 'ach', 'Actinidia08413' => 'ach', 'Actinidia08414' => 'ach', 'Actinidia15289' => 'ach', 'Actinidia19871' => 'ach', 'Actinidia21475' => 'ach', 'Actinidia22576' => 'ach', 'Actinidia28327' => 'ach', 'Actinidia32491' => 'ach', 'Actinidia39463' => 'ach', 'Actinidia39571' => 'ach', 'Ah.01g013750' => 'amhyb', 'Ah.01g023210' => 'amhyb', 'Ah.04g164850' => 'amhyb', 'Ah.05g178060' => 'amhyb', 'Ah.07g204270' => 'amhyb', 'Ah.07g208480' => 'amhyb', 'Ah.09g237410' => 'amhyb', 'Ah.14g089460' => 'amhyb', 'AL1G41790' => 'aly', 'AL1G49050' => 'aly', 'AL1G53810' => 'aly', 'AL1G61400' => 'aly', 'AL4G18580' => 'aly', 'AL5G12510' => 'aly', 'AL5G12540' => 'aly', 'AL6G43230' => 'aly', 'AL7G10370' => 'aly', 'AL7G19250' => 'aly', 'AL8G12240' => 'aly', 'AL8G18540' => 'aly', 'Aqoxy1G02409' => 'aox', 'Aqoxy2G03993' => 'aox', 'Aqoxy3G03357' => 'aox', 'Aqoxy4G00785' => 'aox', 'Aqoxy5G02598' => 'aox', 'Aqoxy6G00132' => 'aox', 'Aqoxy7G01776' => 'aox', 'Aqoxy7G02316' => 'aox', 'Aqoxy7G03973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.12AFKW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B8730' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27IQR1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3F75VG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3RE0GA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41TCQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.527VTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FIR39' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5W8UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DA38EV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ63HS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H1I32C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HC27T5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4M8AP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7N3CZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9UVDZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LS1NQA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT1D4B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SKC4TM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCFV76' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF9Q1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQWD9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1ZM88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WE07RT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YCK7VH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJE6Q6' => 'arhy', 'AT1G28240' => 'ath', 'AT1G34550' => 'ath', 'AT1G53040' => 'ath', 'AT2G02910' => 'ath', 'AT4G09630' => 'ath', 'AT4G38500' => 'ath', 'AT5G42660' => 'ath', 'AT5G46220' => 'ath', 'ATR0152G026' => 'atr', 'ATR0564G343' => 'atr', 'ATR0706G151' => 'atr', 'ATR0733G207' => 'atr', 'ATR0751G234' => 'atr', 'ATR0807G048' => 'atr', 'ATR1091G084' => 'atr', 'Atru.chr10.1229' => 'acertr', 'Atru.chr10.1230' => 'acertr', 'Atru.chr10.1874' => 'acertr', 'Atru.chr11.1808' => 'acertr', 'Atru.chr13.1795' => 'acertr', 'Atru.chr13.570' => 'acertr', 'Atru.chr2.2608' => 'acertr', 'Atru.chr2.2609' => 'acertr', 'Atru.chr5.3428' => 'acertr', 'Atru.chr8.1171' => 'acertr', 'AUR62004651' => 'cqu', 'AUR62008675' => 'cqu', 'AUR62010014' => 'cqu', 'AUR62013004' => 'cqu', 'AUR62014825' => 'cqu', 'AUR62015015' => 'cqu', 'AUR62015151' => 'cqu', 'AUR62017020' => 'cqu', 'AUR62019422' => 'cqu', 'AUR62023570' => 'cqu', 'AUR62025571' => 'cqu', 'AUR62029098' => 'cqu', 'AUR62033863' => 'cqu', 'AUR62034296' => 'cqu', 'AUR62040075' => 'cqu', 'BcaB02g07334' => 'bca', 'BcaB02g10575' => 'bca', 'BcaB03g12119' => 'bca', 'BcaB03g12120' => 'bca', 'BcaB03g13945' => 'bca', 'BcaB04g17123' => 'bca', 'BcaB04g17867' => 'bca', 'BcaB04g19839' => 'bca', 'BcaB07g30317' => 'bca', 'BcaB07g32432' => 'bca', 'BcaB07g33362' => 'bca', 'BcaB08g36611' => 'bca', 'BcaC01g00028' => 'bca', 'BcaC01g01356' => 'bca', 'BcaC01g02034' => 'bca', 'BcaC01g06051' => 'bca', 'BcaC03g16839' => 'bca', 'BcaC03g17176' => 'bca', 'BcaC05g26829' => 'bca', 'BcaC06g31490' => 'bca', 'BcaC06g35344' => 'bca', 'BcaC06g36570' => 'bca', 'BcaC07g37537' => 'bca', 'BcaC08g43491' => 'bca', 'BcaC08g43773' => 'bca', 'BcaNung00234' => 'bca', 'BcaNung01982' => 'bca', 'BcaNung03707' => 'bca', 'BcaNung06454' => 'bca', 'BolC2t10762H' => 'bol', 'BolC2t11191H' => 'bol', 'BolC3t14322H' => 'bol', 'BolC3t19747H' => 'bol', 'BolC3t21425H' => 'bol', 'BolC4t27800H' => 'bol', 'BolC5t31423H' => 'bol', 'BolC6t35951H' => 'bol', 'BolC6t36282H' => 'bol', 'BolC7t40678H' => 'bol', 'BolC7t40679H' => 'bol', 'BolC7t42222H' => 'bol', 'BolC7t43492H' => 'bol', 'BolC7t46785H' => 'bol', 'BolC8t47853H' => 'bol', 'BolC9t56805H' => 'bol', 'BraA02t08000Z' => 'bra', 'BraA02t08341Z' => 'bra', 'BraA03t10936Z' => 'bra', 'BraA03t15657Z' => 'bra', 'BraA04t18100Z' => 'bra', 'BraA05t20523Z' => 'bra', 'BraA06t23353Z' => 'bra', 'BraA06t27473Z' => 'bra', 'BraA06t27769Z' => 'bra', 'BraA07t28928Z' => 'bra', 'BraA08t32236Z' => 'bra', 'BraA08t32841Z' => 'bra', 'BraA08t34524Z' => 'bra', 'BraA09t38742Z' => 'bra', 'BraA09t39295Z' => 'bra', 'C02p47180' => 'bna', 'C02p50990' => 'bna', 'C03p19360' => 'bna', 'C03p74950' => 'bna', 'C03p91000' => 'bna', 'C04p63260' => 'bna', 'C05p27050' => 'bna', 'C06p08750' => 'bna', 'C06p11490' => 'bna', 'C07p02820' => 'bna', 'C07p17180' => 'bna', 'C07p29440' => 'bna', 'C07p63730' => 'bna', 'C09p39260' => 'bna', 'CAN.G1164.34' => 'can', 'CAN.G1164.39' => 'can', 'CAN.G1530.3' => 'can', 'CAN.G162.61' => 'can', 'CAN.G176.6' => 'can', 'CAN.G289.49' => 'can', 'CAN.G370.21' => 'can', 'CAN.G370.22' => 'can', 'CAN.G371.117' => 'can', 'CAN.G58.37' => 'can', 'CAN.G588.98' => 'can', 'CANSAT21G2266' => 'cansat', 'CANSAT25G2799' => 'cansat', 'CANSAT35G0862' => 'cansat', 'CANSAT35G1704' => 'cansat', 'CANSAT35G1760' => 'cansat', 'CANSAT56G3971' => 'cansat', 'CANSAT56G4116' => 'cansat', 'CANSAT80G1259' => 'cansat', 'CARHR027730' => 'chi', 'CARHR033880' => 'chi', 'CARHR043270' => 'chi', 'CARHR145330' => 'chi', 'CARHR145340' => 'chi', 'CARHR175570' => 'chi', 'CARHR181570' => 'chi', 'CARHR258470' => 'chi', 'CARHR260490' => 'chi', 'CARHR294220' => 'chi', 'Carub.0001s2668' => 'cru', 'Carub.0001s3257' => 'cru', 'Carub.0001s4220' => 'cru', 'Carub.0005s0179' => 'cru', 'Carub.0006s2807' => 'cru', 'Carub.0007s0039' => 'cru', 'Carub.0008s0169' => 'cru', 'Carub.0008s0636' => 'cru', 'Ca_00338_v3' => 'car', 'Ca_00542_v3' => 'car', 'Ca_01844_v3' => 'car', 'Ca_10611_v3' => 'car', 'Ca_13326_v3' => 'car', 'Ca_17944_v3' => 'car', 'Ca_18546_v3' => 'car', 'Ca_24219_v3' => 'car', 'Ca_29972_v3' => 'car', 'CBR_g3681' => 'cbr', 'CBR_g40021' => 'cbr', 'Cc01_g08140' => 'ccan', 'Cc02_g13410' => 'ccan', 'Cc02_g37480' => 'ccan', 'Cc05_g12030' => 'ccan', 'Cc09_g03370' => 'ccan', 'Cc09_g10300' => 'ccan', 'Cc10_g03530' => 'ccan', 'Cc10_g11380' => 'ccan', 'CDE01G0176' => 'cde', 'CDE02G0675' => 'cde', 'CDE02G0942' => 'cde', 'CDE02G1153' => 'cde', 'CDE02G4177' => 'cde', 'CDE04G2117' => 'cde', 'CDE04G2736' => 'cde', 'CDE08G1161' => 'cde', 'CDE09G1238' => 'cde', 'Cfa000467' => 'cfa', 'Cfa000947' => 'cfa', 'Cfa004969' => 'cfa', 'Cfa005284' => 'cfa', 'Cfa008993' => 'cfa', 'Cfa018187' => 'cfa', 'Cfa018454' => 'cfa', 'Cfa020585' => 'cfa', 'Ciclev10000424m.g' => 'ccl', 'Ciclev10003605m.g' => 'ccl', 'Ciclev10007828m.g' => 'ccl', 'Ciclev10014620m.g' => 'ccl', 'Ciclev10015169m.g' => 'ccl', 'Ciclev10018291m.g' => 'ccl', 'Ciclev10028256m.g' => 'ccl', 'Ciclev10033822m.g' => 'ccl', 'CiPaw.05G060300' => 'cil', 'CiPaw.05G085000' => 'cil', 'CiPaw.06G083700' => 'cil', 'CiPaw.06G120300' => 'cil', 'CiPaw.09G060500' => 'cil', 'CiPaw.09G123800' => 'cil', 'CiPaw.11G169700' => 'cil', 'CiPaw.12G118300' => 'cil', 'CiPaw.15G071000' => 'cil', 'CiPaw.15G081900' => 'cil', 'ClCG01G024610' => 'cla', 'ClCG03G006070' => 'cla', 'ClCG05G019250' => 'cla', 'ClCG09G009500' => 'cla', 'ClCG11G008200' => 'cla', 'ClCG11G018080' => 'cla', 'COL.COLO4_17373' => 'col', 'COL.COLO4_22994' => 'col', 'COL.COLO4_26389' => 'col', 'COL.COLO4_27170' => 'col', 'COL.COLO4_31074' => 'col', 'COL.COLO4_31465' => 'col', 'COL.COLO4_36438' => 'col', 'COL.COLO4_36439' => 'col', 'Cpa.g.c38781' => 'cpa', 'Cpa.g.sc128.12' => 'cpa', 'Cpa.g.sc166.7' => 'cpa', 'Cpa.g.sc166.8' => 'cpa', 'Cpa.g.sc20.111' => 'cpa', 'Cpa.g.sc27.31' => 'cpa', 'Cpa.g.sc64.36' => 'cpa', 'Cpa.g.sc64.37' => 'cpa', 'Cpa.g.sc66.49' => 'cpa', 'Cpa.g.sc80.64' => 'cpa', 'CsaV3_1G012320' => 'csa', 'CsaV3_2G008480' => 'csa', 'CsaV3_2G033450' => 'csa', 'CsaV3_3G044830' => 'csa', 'CsaV3_4G033710' => 'csa', 'CsaV3_6G051730' => 'csa', 'CsaV3_7G025350' => 'csa', 'CSS0001067' => 'camsi', 'CSS0005996' => 'camsi', 'CSS0006590' => 'camsi', 'CSS0009673' => 'camsi', 'CSS0010201' => 'camsi', 'CSS0010549' => 'camsi', 'CSS0011364' => 'camsi', 'CSS0014473' => 'camsi', 'CSS0014961' => 'camsi', 'CSS0020191' => 'camsi', 'CSS0021165' => 'camsi', 'CSS0022306' => 'camsi', 'CSS0030591' => 'camsi', 'CSS0030696' => 'camsi', 'CSS0032653' => 'camsi', 'CSS0037487' => 'camsi', 'CSS0041102' => 'camsi', 'CSS0041261' => 'camsi', 'CSS0046246' => 'camsi', 'CSS0049256' => 'camsi', 'DCAR_004075' => 'dca', 'DCAR_011538' => 'dca', 'DCAR_019553' => 'dca', 'DCAR_020952' => 'dca', 'DCAR_021739' => 'dca', 'DCAR_027407' => 'dca', 'DCAR_027913' => 'dca', 'DCAR_028066' => 'dca', 'Dinv05899' => 'din', 'Dinv07563' => 'din', 'Dinv08010' => 'din', 'Dinv14125' => 'din', 'Dinv20172' => 'din', 'Dinv30743' => 'din', 'Dinv31229' => 'din', 'Dinv34162' => 'din', 'Dinv36028' => 'din', 'Dinv39368' => 'din', 'Dinv40565' => 'din', 'Dinv41706' => 'din', 'Duzib052G0089' => 'dzi', 'Duzib116G0641' => 'dzi', 'Duzib132G0069' => 'dzi', 'Duzib132G1219' => 'dzi', 'Duzib147G0278' => 'dzi', 'Duzib160G0480' => 'dzi', 'Duzib170G0661' => 'dzi', 'Duzib177G0591' => 'dzi', 'Duzib187G1353' => 'dzi', 'Duzib192G0858' => 'dzi', 'Duzib192G0883' => 'dzi', 'Duzib213G0506' => 'dzi', 'Duzib235G0289' => 'dzi', 'Duzib251G0422' => 'dzi', 'ECA232G3898' => 'eca', 'ECA233G5950' => 'eca', 'ECA234G1699' => 'eca', 'ECA234G2421' => 'eca', 'ECA236G0426' => 'eca', 'ECA236G4331' => 'eca', 'ECA248G2573' => 'eca', 'EL10Ac1g00077' => 'bvu', 'EL10Ac1g01746' => 'bvu', 'EL10Ac2g03464' => 'bvu', 'EL10Ac4g08176' => 'bvu', 'EL10Ac7g17521' => 'bvu', 'EL10Ac8g20386' => 'bvu', 'EL10Ac9g21343' => 'bvu', 'EL10Ac9g22688' => 'bvu', 'Eucgr.B03434' => 'egr', 'Eucgr.D00618' => 'egr', 'Eucgr.E02395' => 'egr', 'Eucgr.F01129' => 'egr', 'Eucgr.F02622' => 'egr', 'Eucgr.F04207' => 'egr', 'FAN01G0570' => 'fan', 'FAN03G3351' => 'fan', 'FAN06G3702' => 'fan', 'FAN07G2149' => 'fan', 'FAN10G3758' => 'fan', 'FAN11G1170' => 'fan', 'FAN11G2050' => 'fan', 'FAN11G2724' => 'fan', 'FAN12G1700' => 'fan', 'FAN12G2028' => 'fan', 'FAN15G1160' => 'fan', 'FAN15G3063' => 'fan', 'FAN16G2540' => 'fan', 'FAN16G3077' => 'fan', 'FAN16G3624' => 'fan', 'FAN17G0221' => 'fan', 'FAN20G2492' => 'fan', 'FAN20G2905' => 'fan', 'FAN21G0548' => 'fan', 'FAN21G1300' => 'fan', 'FAN22G0077' => 'fan', 'FAN22G1315' => 'fan', 'FAN24G1280' => 'fan', 'FAN24G1445' => 'fan', 'FAN24G3527' => 'fan', 'FAN25G0464' => 'fan', 'FAN25G2885' => 'fan', 'FAN25G3270' => 'fan', 'FAN27G1101' => 'fan', 'FAN27G2846' => 'fan', 'FAN27G3524' => 'fan', 'FvH4_2g11770' => 'fve', 'FvH4_2g15630' => 'fve', 'FvH4_3g05570' => 'fve', 'FvH4_3g09110' => 'fve', 'FvH4_3g19940' => 'fve', 'FvH4_4g04821' => 'fve', 'FvH4_4g31480' => 'fve', 'FvH4_7g01740' => 'fve', 'Glyma.05G130400' => 'gma', 'Glyma.05G156400' => 'gma', 'Glyma.07G197000' => 'gma', 'Glyma.08G085151' => 'gma', 'Glyma.08G114500' => 'gma', 'Glyma.08G300400' => 'gma', 'Glyma.10G215800' => 'gma', 'Glyma.12G224400' => 'gma', 'Glyma.13G179300' => 'gma', 'Glyma.13G218151' => 'gma', 'Glyma.13G238800' => 'gma', 'Glyma.13G276900' => 'gma', 'Glyma.14G078200' => 'gma', 'Glyma.15G074500' => 'gma', 'Glyma.15G094100' => 'gma', 'Glyma.17G247200' => 'gma', 'Glyma.18G120100' => 'gma', 'Glyma.20G176000' => 'gma', 'Gohir.A01G063600' => 'ghi', 'Gohir.A01G170301' => 'ghi', 'Gohir.A02G060500' => 'ghi', 'Gohir.A05G133850' => 'ghi', 'Gohir.A05G161400' => 'ghi', 'Gohir.A06G012900' => 'ghi', 'Gohir.A06G035901' => 'ghi', 'Gohir.A06G127100' => 'ghi', 'Gohir.A06G210500' => 'ghi', 'Gohir.A08G008650' => 'ghi', 'Gohir.A09G072700' => 'ghi', 'Gohir.A09G088301' => 'ghi', 'Gohir.A10G040600' => 'ghi', 'Gohir.A12G036300' => 'ghi', 'Gohir.A12G143350' => 'ghi', 'Gohir.A12G165500' => 'ghi', 'Gohir.A13G145700' => 'ghi', 'Gohir.D01G050000' => 'ghi', 'Gohir.D01G051366' => 'ghi', 'Gohir.D01G161350' => 'ghi', 'Gohir.D02G065900' => 'ghi', 'Gohir.D05G164200' => 'ghi', 'Gohir.D05G355500' => 'ghi', 'Gohir.D06G010400' => 'ghi', 'Gohir.D06G111250' => 'ghi', 'Gohir.D06G132000' => 'ghi', 'Gohir.D06G210500' => 'ghi', 'Gohir.D07G165675' => 'ghi', 'Gohir.D08G062240' => 'ghi', 'Gohir.D08G086101' => 'ghi', 'Gohir.D08G138060' => 'ghi', 'Gohir.D09G072300' => 'ghi', 'Gohir.D10G041400' => 'ghi', 'Gohir.D11G191020' => 'ghi', 'Gohir.D11G212066' => 'ghi', 'Gohir.D12G036300' => 'ghi', 'Gohir.D12G168600' => 'ghi', 'Gohir.D13G150600' => 'ghi', 'Gorai.001G057300' => 'gra', 'Gorai.002G069900' => 'gra', 'Gorai.002G200000' => 'gra', 'Gorai.003G067600' => 'gra', 'Gorai.005G074800' => 'gra', 'Gorai.006G087300' => 'gra', 'Gorai.008G037500' => 'gra', 'Gorai.008G181400' => 'gra', 'Gorai.009G169400' => 'gra', 'Gorai.009G387900' => 'gra', 'Gorai.010G013300' => 'gra', 'Gorai.010G153800' => 'gra', 'Gorai.010G255800' => 'gra', 'Gorai.011G043700' => 'gra', 'Gorai.011G198900' => 'gra', 'Gorai.013G168400' => 'gra', 'GSVIVG01005212001' => 'vvi', 'GSVIVG01006163001' => 'vvi', 'GSVIVG01009625001' => 'vvi', 'GSVIVG01014338001' => 'vvi', 'GSVIVG01020005001' => 'vvi', 'GSVIVG01021450001' => 'vvi', 'GSVIVG01023975001' => 'vvi', 'GSVIVG01034490001' => 'vvi', 'HanXRQChr04g0112071' => 'han', 'HanXRQChr05g0131151' => 'han', 'HanXRQChr09g0262371' => 'han', 'HanXRQChr09g0268401' => 'han', 'HanXRQChr10g0279241' => 'han', 'HanXRQChr10g0297961' => 'han', 'HanXRQChr11g0326231' => 'han', 'HanXRQChr11g0328471' => 'han', 'HanXRQChr16g0507941' => 'han', 'HanXRQChr17g0560211' => 'han', 'Haze_02108' => 'cav', 'Haze_02428' => 'cav', 'Haze_05593' => 'cav', 'Haze_06448' => 'cav', 'Haze_09427' => 'cav', 'Haze_12022' => 'cav', 'Haze_17612' => 'cav', 'Haze_17928' => 'cav', 'Hma1.2p1_0032F.1_g019250' => 'hma', 'Hma1.2p1_0163F.1_g072690' => 'hma', 'Hma1.2p1_0265F.1_g106710' => 'hma', 'Hma1.2p1_0286F.1_g113970' => 'hma', 'Hma1.2p1_0363F.1_g136640' => 'hma', 'Hma1.2p1_0584F.1_g183470' => 'hma', 'Hma1.2p1_0885F.1_g232570' => 'hma', 'HPP92_006022' => 'vpl', 'HPP92_007320' => 'vpl', 'HPP92_011521' => 'vpl', 'HPP92_019387' => 'vpl', 'HPP92_024038' => 'vpl', 'Hund05891' => 'sun', 'Hund06450' => 'sun', 'Hund12053' => 'sun', 'Hund16800' => 'sun', 'Hund21222' => 'sun', 'Hund22896' => 'sun', 'Hund23746' => 'sun', 'Hund27083' => 'sun', 'Lalb_Chr02g0141831' => 'lal', 'Lalb_Chr02g0141841' => 'lal', 'Lalb_Chr05g0220411' => 'lal', 'Lalb_Chr06g0162081' => 'lal', 'Lalb_Chr09g0327651' => 'lal', 'Lalb_Chr13g0295051' => 'lal', 'Lalb_Chr15g0086801' => 'lal', 'Lalb_Chr16g0383781' => 'lal', 'Lalb_Chr16g0383791' => 'lal', 'Lalb_Chr18g0055441' => 'lal', 'Lalb_Chr18g0059611' => 'lal', 'Lalb_Chr20g0109661' => 'lal', 'Lalb_Chr20g0109831' => 'lal', 'Lalb_Chr20g0121871' => 'lal', 'Lalb_Chr22g0355361' => 'lal', 'Lalb_Chr25g0286371' => 'lal', 'Lj1A1187G43' => 'lonja', 'Lj1A1205T50' => 'lonja', 'Lj1A800G33' => 'lonja', 'Lj1C1187T7' => 'lonja', 'Lj1C843T11' => 'lonja', 'Lj1g0010940' => 'lja', 'Lj2A288T69' => 'lonja', 'Lj3g0024276' => 'lja', 'Lj4A47T76' => 'lonja', 'Lj4g0005805' => 'lja', 'Lj4g0006097' => 'lja', 'Lj4g0008528' => 'lja', 'Lj4g0024907' => 'lja', 'Lj5g0012472' => 'lja', 'Lj5g0018648' => 'lja', 'Lj6C789G1' => 'lonja', 'Lj6g0004000' => 'lja', 'Lj7A292G67' => 'lonja', 'Lj7A292T64' => 'lonja', 'Lj9A400T58' => 'lonja', 'Lsat_1_v5_gn_1_126181' => 'lsa', 'Lsat_1_v5_gn_4_123041' => 'lsa', 'Lsat_1_v5_gn_4_133620' => 'lsa', 'Lsat_1_v5_gn_4_53221' => 'lsa', 'Lsat_1_v5_gn_4_71961' => 'lsa', 'Lsat_1_v5_gn_7_105241' => 'lsa', 'Lsat_1_v5_gn_7_21361' => 'lsa', 'Lsat_1_v5_gn_7_28860' => 'lsa', 'Lsat_1_v5_gn_7_31260' => 'lsa', 'Lsat_1_v5_gn_8_52801' => 'lsa', 'Manes.02G191400' => 'mes', 'Manes.03G110100' => 'mes', 'Manes.04G071100' => 'mes', 'Manes.05G100500' => 'mes', 'Manes.05G164700' => 'mes', 'Manes.15G087000' => 'mes', 'Manes.15G121500' => 'mes', 'Manes.16G028300' => 'mes', 'Manes.17G046100' => 'mes', 'Manes.17G069800' => 'mes', 'Manes.18G100500' => 'mes', 'Mapoly0002s0109' => 'mpo', 'Mapoly0024s0007' => 'mpo', 'Mapoly0089s0032' => 'mpo', 'MBI04_g42241_MAGBIO' => 'mbi', 'MBI05_g11988_MAGBIO' => 'mbi', 'MBI05_g35452_MAGBIO' => 'mbi', 'MBI07_g30179_MAGBIO' => 'mbi', 'MBI07_g35859_MAGBIO' => 'mbi', 'MBI07_g35860_MAGBIO' => 'mbi', 'MBI07_g37166_MAGBIO' => 'mbi', 'MBI08_g18172_MAGBIO' => 'mbi', 'MBI09_g08441_MAGBIO' => 'mbi', 'MBI13_g01676_MAGBIO' => 'mbi', 'MBI14_g42955_MAGBIO' => 'mbi', 'MBI16_g13161_MAGBIO' => 'mbi', 'MBI17_g27204_MAGBIO' => 'mbi', 'MBI19_g21595_MAGBIO' => 'mbi', 'MD00G1148400' => 'mdo', 'MD02G1301200' => 'mdo', 'MD03G1227800' => 'mdo', 'MD05G1041100' => 'mdo', 'MD05G1124800' => 'mdo', 'MD05G1284000' => 'mdo', 'MD05G1338800' => 'mdo', 'MD05G1338900' => 'mdo', 'MD07G1022800' => 'mdo', 'MD10G1047500' => 'mdo', 'MD10G1127500' => 'mdo', 'MD10G1262300' => 'mdo', 'MD10G1293800' => 'mdo', 'MD16G1074300' => 'mdo', 'Medtr1g021670' => 'mtr', 'Medtr1g096320' => 'mtr', 'Medtr2g013690' => 'mtr', 'Medtr2g019450' => 'mtr', 'Medtr2g085170' => 'mtr', 'Medtr4g088785' => 'mtr', 'Medtr8g055930' => 'mtr', 'Medtr8g085850' => 'mtr', 'MELO3C002605.2' => 'cme', 'MELO3C003891.2' => 'cme', 'MELO3C004012.2' => 'cme', 'MELO3C007134.2' => 'cme', 'MELO3C008118.2' => 'cme', 'MELO3C016700.2' => 'cme', 'MELO3C024127.2' => 'cme', 'MELO3C033361.2' => 'cme', 'MELO3C033362.2' => 'cme', 'Migut.C00430' => 'egut', 'Migut.C01246' => 'egut', 'Migut.E00101' => 'egut', 'Migut.H01486' => 'egut', 'Migut.H01939' => 'egut', 'Migut.K00360' => 'egut', 'Migut.M00910' => 'egut', 'Migut.M01139' => 'egut', 'Migut.N02677' => 'egut', 'MSTRG.13252' => 'ama', 'MSTRG.14701' => 'ama', 'MSTRG.1521' => 'ama', 'MSTRG.15884' => 'ama', 'MSTRG.16242' => 'ama', 'MSTRG.22285' => 'ama', 'MSTRG.22444' => 'ama', 'MSTRG.2349' => 'ama', 'MSTRG.26308' => 'ama', 'MSTRG.28296' => 'ama', 'MSTRG.9895' => 'ama', 'Nitab4.5_0000110g0060' => 'nta', 'Nitab4.5_0000420g0130' => 'nta', 'Nitab4.5_0000422g0030' => 'nta', 'Nitab4.5_0000560g0180' => 'nta', 'Nitab4.5_0000703g0100' => 'nta', 'Nitab4.5_0000786g0200' => 'nta', 'Nitab4.5_0001336g0020' => 'nta', 'Nitab4.5_0001796g0030' => 'nta', 'Nitab4.5_0003348g0060' => 'nta', 'Nitab4.5_0003698g0040' => 'nta', 'Nitab4.5_0003942g0090' => 'nta', 'Nitab4.5_0004775g0070' => 'nta', 'Nitab4.5_0004864g0030' => 'nta', 'Nitab4.5_0005615g0020' => 'nta', 'Nitab4.5_0009288g0030' => 'nta', 'Nitab4.5_0009341g0010' => 'nta', 'Nitab4.5_0009535g0010' => 'nta', 'Nn1g03995' => 'nnu', 'Nn1g04100' => 'nnu', 'Nn1g06530' => 'nnu', 'Nn3g16404' => 'nnu', 'Nn3g17212' => 'nnu', 'Nn3g20776' => 'nnu', 'Nn3g21923' => 'nnu', 'Nn5g27737' => 'nnu', 'Nn5g29461' => 'nnu', 'Nn7g38355' => 'nnu', 'Nn8g39873' => 'nnu', 'Oeu000548.2' => 'oeu', 'Oeu004672.1' => 'oeu', 'Oeu015605.2' => 'oeu', 'Oeu016092.1' => 'oeu', 'Oeu017879.3' => 'oeu', 'Oeu024910.1' => 'oeu', 'Oeu028965.1' => 'oeu', 'Oeu031269.1' => 'oeu', 'Oeu031270.1' => 'oeu', 'Oeu032535.1' => 'oeu', 'Oeu034151.1' => 'oeu', 'Oeu034152.1' => 'oeu', 'Oeu034588.2' => 'oeu', 'Oeu050846.1' => 'oeu', 'Oeu050849.2' => 'oeu', 'Oeu051063.2' => 'oeu', 'Oeu052368.1' => 'oeu', 'Oeu052370.1' => 'oeu', 'Os01g0210400' => 'osa', 'Os01g0304300' => 'osa', 'Os01g0749100' => 'osa', 'Os02g0745800' => 'osa', 'Os03g0769050' => 'osa', 'Os05g0531500' => 'osa', 'Os06g0724300' => 'osa', 'Os11g0198100' => 'osa', 'Peaxi162Scf00069g01425' => 'pax', 'Peaxi162Scf00280g00811' => 'pax', 'Peaxi162Scf00310g00615' => 'pax', 'Peaxi162Scf00362g00542' => 'pax', 'Peaxi162Scf00461g00310' => 'pax', 'Peaxi162Scf00530g00118' => 'pax', 'Peaxi162Scf00541g00057' => 'pax', 'Peaxi162Scf00661g00017' => 'pax', 'Peaxi162Scf00926g00027' => 'pax', 'Peaxi162Scf01064g00263' => 'pax', 'Peaxi162Scf01211g00135' => 'pax', 'PGR004G2336' => 'pgr', 'PGR042G0327' => 'pgr', 'PGR042G1957' => 'pgr', 'PGR042G2003' => 'pgr', 'PGR042G3929' => 'pgr', 'PGR083G1137' => 'pgr', 'PGR083G1364' => 'pgr', 'PGSC0003DMG400003381' => 'stu', 'PGSC0003DMG400003417' => 'stu', 'PGSC0003DMG400008981' => 'stu', 'PGSC0003DMG400012417' => 'stu', 'PGSC0003DMG400012823' => 'stu', 'PGSC0003DMG400016885' => 'stu', 'PGSC0003DMG400022812' => 'stu', 'PGSC0003DMG400029726' => 'stu', 'PGSC0003DMG401009243' => 'stu', 'PGSC0003DMG401031505' => 'stu', 'PGSC0003DMG402031505' => 'stu', 'Phvul.001G017600' => 'pvu', 'Phvul.002G193500' => 'pvu', 'Phvul.002G228900' => 'pvu', 'Phvul.002G236800' => 'pvu', 'Phvul.003G049500' => 'pvu', 'Phvul.005G072000' => 'pvu', 'Phvul.006G164800' => 'pvu', 'Phvul.006G185100' => 'pvu', 'Phvul.007G090000' => 'pvu', 'Potri.001G399800' => 'ptr', 'Potri.002G149900' => 'ptr', 'Potri.004G044100' => 'ptr', 'Potri.004G177600' => 'ptr', 'Potri.009G138000' => 'ptr', 'Potri.010G094000' => 'ptr', 'Potri.011G053000' => 'ptr', 'Potri.011G119300' => 'ptr', 'Potri.013G113700' => 'ptr', 'Potri.018G107800' => 'ptr', 'Potri.019G084100' => 'ptr', 'Pp3c14_23720' => 'ppa', 'Pp3c16_6340' => 'ppa', 'Pp3c23_13420' => 'ppa', 'Pp3c24_2740' => 'ppa', 'Pp3c25_860' => 'ppa', 'Pp3c8_21750' => 'ppa', 'Prupe.1G273000' => 'ppe', 'Prupe.1G273700' => 'ppe', 'Prupe.1G274100' => 'ppe', 'Prupe.2G023300' => 'ppe', 'Prupe.4G048000' => 'ppe', 'Prupe.4G080400' => 'ppe', 'Prupe.4G181200' => 'ppe', 'Prupe.8G056900' => 'ppe', 'Prupe.8G168700' => 'ppe', 'Psat1g189080' => 'psa', 'Psat1g204760' => 'psa', 'Psat4g175560' => 'psa', 'Psat4g177720' => 'psa', 'Psat5g244240' => 'psa', 'Psat6g010720' => 'psa', 'Psat6g187200' => 'psa', 'Psat7g072040' => 'psa', 'PSO017G3501' => 'pso', 'PSO063G2148' => 'pso', 'PSO063G5608' => 'pso', 'PSO210G6392' => 'pso', 'PSO541G2319' => 'pso', 'PSO541G2836' => 'pso', 'PSO541G4012' => 'pso', 'PSO541G6253' => 'pso', 'PSO675G0580' => 'pso', 'PSO675G0856' => 'pso', 'PSO675G5635' => 'pso', 'PSO675G9157' => 'pso', 'PSO832G1660' => 'pso', 'PSO832G1969' => 'pso', 'QL02p007186' => 'qlo', 'QL02p033904' => 'qlo', 'QL03p064391' => 'qlo', 'QL05p040593' => 'qlo', 'QL05p058242' => 'qlo', 'QL08p021825' => 'qlo', 'QL11p004981' => 'qlo', 'RcHm_v2.0_Chr1g0318301' => 'rch', 'RcHm_v2.0_Chr4g0418501' => 'rch', 'RcHm_v2.0_Chr4g0439971' => 'rch', 'RcHm_v2.0_Chr5g0008541' => 'rch', 'RcHm_v2.0_Chr5g0014101' => 'rch', 'RcHm_v2.0_Chr5g0014131' => 'rch', 'RcHm_v2.0_Chr5g0033621' => 'rch', 'RcHm_v2.0_Chr6g0272041' => 'rch', 'RcHm_v2.0_Chr6g0278831' => 'rch', 'Rhsim02G0130400' => 'rsi', 'Rhsim02G0171100' => 'rsi', 'Rhsim05G0053000' => 'rsi', 'Rhsim05G0053100' => 'rsi', 'Rhsim06G0096500' => 'rsi', 'Rhsim06G0096600' => 'rsi', 'Rhsim06G0199100' => 'rsi', 'Rhsim12G0062300' => 'rsi', 'Rhsim12G0062800' => 'rsi', 'Sabra02G0118600' => 'sbr', 'Sabra04G0027300' => 'sbr', 'Sabra04G0119500' => 'sbr', 'Sabra08G0112500' => 'sbr', 'Sabra11G0036800' => 'sbr', 'Sabra11G0103800' => 'sbr', 'Sabra13G0096300' => 'sbr', 'Sabra16G0262300' => 'sbr', 'Sabra18G0091700' => 'sbr', 'Sabra19G0095400' => 'sbr', 'SalBow6G3080' => 'sbo', 'SalBow7G1157' => 'sbo', 'SalBow7G2123' => 'sbo', 'SalBow7G2285' => 'sbo', 'SalBow7G3537' => 'sbo', 'SalBow8G2947' => 'sbo', 'SalBow8G4463' => 'sbo', 'SalBow8G5466' => 'sbo', 'Sc01g0001750' => 'sci', 'Sc02g0006640' => 'sci', 'Sc02g0006670' => 'sci', 'Sc04g0008220' => 'sci', 'Sc05g0006190' => 'sci', 'Sc08g0002760' => 'sci', 'Sc17g0006170' => 'sci', 'Sc22g0002050' => 'sci', 'Sc23g0001190' => 'sci', 'Sc24g0000980' => 'sci', 'Sed0006245' => 'sed', 'Sed0007543' => 'sed', 'Sed0009411' => 'sed', 'Sed0010765' => 'sed', 'Sed0012944' => 'sed', 'Sed0014682' => 'sed', 'Sed0016174' => 'sed', 'Sed0016796' => 'sed', 'Sed0020317' => 'sed', 'Sed0021467' => 'sed', 'SEGI_01316' => 'sgi', 'SEGI_03374' => 'sgi', 'SEGI_16265' => 'sgi', 'SEGI_18569' => 'sgi', 'SEGI_20351' => 'sgi', 'SEGI_26395' => 'sgi', 'SEGI_29469' => 'sgi', 'SEGI_34771' => 'sgi', 'SEGI_36769' => 'sgi', 'SEGI_37139' => 'sgi', 'SGA_v2.0_scaffold100G29687' => 'sas', 'SGA_v2.0_scaffold118G32472' => 'sas', 'SGA_v2.0_scaffold14G07051' => 'sas', 'SGA_v2.0_scaffold183G39845' => 'sas', 'SGA_v2.0_scaffold1G00174' => 'sas', 'SGA_v2.0_scaffold22G09714' => 'sas', 'SGA_v2.0_scaffold333G48992' => 'sas', 'SGA_v2.0_scaffold46G17491' => 'sas', 'SGA_v2.0_scaffold49G18294' => 'sas', 'SGA_v2.0_scaffold63G21658' => 'sas', 'SHI01741' => 'shi', 'SHI05771' => 'shi', 'SHI18077' => 'shi', 'SHI20525' => 'shi', 'SHI20527' => 'shi', 'SHI20528' => 'shi', 'SMO172G0185' => 'smo', 'SMO198G0020' => 'smo', 'SMO351G0006' => 'smo', 'SMO356G0118' => 'smo', 'SMO358G0296' => 'smo', 'SMO367G0079' => 'smo', 'SMO367G1277' => 'smo', 'Solyc01g014220.3' => 'sly', 'Solyc01g111770.2' => 'sly', 'Solyc02g078180.3' => 'sly', 'Solyc03g006430.3' => 'sly', 'Solyc03g006456.1' => 'sly', 'Solyc03g079860.2' => 'sly', 'Solyc04g079770.3' => 'sly', 'Solyc05g007430.4' => 'sly', 'Solyc07g063150.3' => 'sly', 'Solyc08g016620.3' => 'sly', 'Solyc09g057590.3' => 'sly', 'Solyc09g057600.1' => 'sly', 'Solyc10g009050.3' => 'sly', 'Solyc11g017420.2' => 'sly', 'Sopen01g053810' => 'spe', 'Sopen02g023040' => 'spe', 'Sopen03g002440' => 'spe', 'Sopen04g033350' => 'spe', 'Sopen05g003310' => 'spe', 'Sopen07g004050' => 'spe', 'Sopen07g031340' => 'spe', 'Sopen08g006990' => 'spe', 'Sopen10g004830' => 'spe', 'Sopen11g009370' => 'spe', 'Sp1g24450' => 'spa', 'Sp1g29670' => 'spa', 'Sp1g39600' => 'spa', 'Sp2g11080' => 'spa', 'Sp2g13970' => 'spa', 'Sp4g16130' => 'spa', 'Sp6g13080' => 'spa', 'Sp7g37270' => 'spa', 'TAR371G0065' => 'tar', 'TAR376G0340' => 'tar', 'TAR376G0435' => 'tar', 'TAR381G0002' => 'tar', 'TAR381G1236' => 'tar', 'TAR624G0055' => 'tar', 'TAR624G0324' => 'tar', 'TAR624G0696' => 'tar', 'TAR624G0906' => 'tar', 'TAR625G0107' => 'tar', 'TAR626G0015' => 'tar', 'TAR626G1356' => 'tar', 'TAR627G0888' => 'tar', 'TAR628G0399' => 'tar', 'TAR628G1327' => 'tar', 'TAR629G2831' => 'tar', 'TAR629G2874' => 'tar', 'TAR633G1432' => 'tar', 'TAR633G2771' => 'tar', 'THA.LOC104803394' => 'tha', 'THA.LOC104805153' => 'tha', 'THA.LOC104806784' => 'tha', 'THA.LOC104810473' => 'tha', 'THA.LOC104813100' => 'tha', 'THA.LOC104814215' => 'tha', 'THA.LOC104815554' => 'tha', 'THA.LOC104820544' => 'tha', 'THA.LOC104824754' => 'tha', 'THA.LOC104827717' => 'tha', 'Thecc.02G031400' => 'tca', 'Thecc.02G055900' => 'tca', 'Thecc.02G350800' => 'tca', 'Thecc.06G150900' => 'tca', 'Thecc.06G186600' => 'tca', 'Thecc.07G089600' => 'tca', 'Thecc.08G020400' => 'tca', 'Thecc.08G182100' => 'tca', 'Thhalv10000873m.g' => 'esa', 'Thhalv10004185m.g' => 'esa', 'Thhalv10006981m.g' => 'esa', 'Thhalv10007204m.g' => 'esa', 'Thhalv10011374m.g' => 'esa', 'Thhalv10013482m.g' => 'esa', 'Thhalv10017801m.g' => 'esa', 'Thhalv10024983m.g' => 'esa', 'TPR.G12072' => 'tpr', 'TPR.G15769' => 'tpr', 'TPR.G16504' => 'tpr', 'TPR.G16506' => 'tpr', 'TPR.G24345' => 'tpr', 'TPR.G26666' => 'tpr', 'TPR.G27320' => 'tpr', 'TPR.G31819' => 'tpr', 'TPR.G38879' => 'tpr', 'TPR.G39015' => 'tpr', 'TPR.G8819' => 'tpr', 'TWI09G0924' => 'twi', 'TWI12G0811' => 'twi', 'TWI12G1294' => 'twi', 'TWI31G0150' => 'twi', 'TWI36G1262' => 'twi', 'TWI38G1287' => 'twi', 'TWI38G1633' => 'twi', 'TWI38G1982' => 'twi', 'TWI39G0116' => 'twi', 'TWI60G1011' => 'twi', 'TWI63G0171' => 'twi', 'TWI73G0839' => 'twi', 'TWI79G1511' => 'twi', 'unitig_0.g915' => 'ugi', 'unitig_0.g916' => 'ugi', 'unitig_21.g20219' => 'ugi', 'unitig_21.g20416' => 'ugi', 'unitig_578.g16132' => 'ugi', 'unitig_578.g16718' => 'ugi', 'unitig_62.g23481' => 'ugi', 'unitig_744.g24535' => 'ugi', 'unitig_749.g13525' => 'ugi', 'vmacro01248' => 'vma', 'vmacro02290' => 'vma', 'vmacro10946' => 'vma', 'vmacro11865' => 'vma', 'vmacro12493' => 'vma', 'vmacro17322' => 'vma', 'vmacro21599' => 'vma', 'vmacro23041' => 'vma', 'VMungo0251G0004' => 'vmu', 'VMungo0251G2639' => 'vmu', 'VMungo0251G2967' => 'vmu', 'VMungo0540G0864' => 'vmu', 'VMungo0540G1569' => 'vmu', 'VMungo0647G0317' => 'vmu', 'VMungo0720G1373' => 'vmu', 'VMungo0720G1508' => 'vmu', 'VMungo1080G0485' => 'vmu', 'VMungo1215G3177' => 'vmu', 'Zm00001eb112600' => 'zma', 'Zm00001eb120220' => 'zma', 'Zm00001eb153240' => 'zma', 'Zm00001eb168880' => 'zma', 'Zm00001eb213920' => 'zma', 'Zm00001eb228280' => 'zma', 'Zm00001eb254580' => 'zma', 'Zm00001eb272180' => 'zma', 'Zm00001eb293190' => 'zma', 'Zm00001eb322930' => 'zma', 'Zm00001eb353360' => 'zma', 'Zm00001eb353390' => 'zma', 'Zm00001eb353430' => 'zma', 'Zm00001eb353440' => 'zma', 'Zm00001eb353780' => 'zma' ) $gf_id = 'HOM05D000499' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000499' ) $data_identifier = 'HOM05D000499' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 29, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 12, 'amhyb' => (int) 8, 'aly' => (int) 12, 'aox' => (int) 9, 'arhy' => (int) 26, 'ath' => (int) 8, 'atr' => (int) 7, 'acertr' => (int) 10, 'cqu' => (int) 15, 'bca' => (int) 29, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 11, 'cansat' => (int) 8, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 9, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 8, 'cpa' => (int) 10, 'csa' => (int) 7, 'camsi' => (int) 20, 'dca' => (int) 8, 'din' => (int) 12, 'dzi' => (int) 14, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 6, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 38, 'gra' => (int) 16, 'vvi' => (int) 8, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 5, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 11, 'lja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 11, 'mpo' => (int) 3, 'mbi' => (int) 14, 'mdo' => (int) 14, 'mtr' => (int) 8, 'cme' => (int) 9, 'egut' => (int) 9, 'ama' => (int) 11, 'nta' => (int) 17, 'nnu' => (int) 11, 'oeu' => (int) 18, 'osa' => (int) 8, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 6, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 9, 'rsi' => (int) 9, 'sbr' => (int) 10, 'sbo' => (int) 8, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 10, 'sas' => (int) 10, 'shi' => (int) 6, 'smo' => (int) 7, 'sly' => (int) 14, 'spe' => (int) 10, 'spa' => (int) 8, 'tar' => (int) 19, 'tha' => (int) 10, 'tca' => (int) 8, 'esa' => (int) 8, 'tpr' => (int) 11, 'twi' => (int) 13, 'ugi' => (int) 9, 'vma' => (int) 8, 'vmu' => (int) 10, 'zma' => (int) 15 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb353780' $species_info = array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ) $local_species = 'nta' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000499', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1066', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p29780' => 'bna', 'A02p33180' => 'bna', 'A03p16470' => 'bna', 'A03p66010' => 'bna', 'A04p25970' => 'bna', 'A06p01270' => 'bna', 'A06p46080' => 'bna', 'A07p11400' => 'bna', 'A08p01840' => 'bna', 'A08p08230' => 'bna', 'A08p25740' => 'bna', 'A09p32070' => 'bna', 'A09p37830' => 'bna', 'A09p42840' => 'bna', 'A09p42850' => 'bna', 'Aa31LG10G2060' => 'aar', 'Aa31LG2G7410' => 'aar', 'Aa31LG6G10200' => 'aar', 'Aa31LG6G16680' => 'aar', 'Aa31LG6G8470' => 'aar', 'Aa31LG9G12730' => 'aar', 'Aa31LG9G13680' => 'aar', 'Aa31LG9G14920' => 'aar', 'Aa31LG9G6650' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4977' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5467' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3254' => 'aag', 'Actinidia02578' => 'ach', 'Actinidia07693' => 'ach', 'Actinidia08413' => 'ach', 'Actinidia08414' => 'ach', 'Actinidia15289' => 'ach', 'Actinidia19871' => 'ach', 'Actinidia21475' => 'ach', 'Actinidia22576' => 'ach', 'Actinidia28327' => 'ach', 'Actinidia32491' => 'ach', 'Actinidia39463' => 'ach', 'Actinidia39571' => 'ach', 'Ah.01g013750' => 'amhyb', 'Ah.01g023210' => 'amhyb', 'Ah.04g164850' => 'amhyb', 'Ah.05g178060' => 'amhyb', 'Ah.07g204270' => 'amhyb', 'Ah.07g208480' => 'amhyb', 'Ah.09g237410' => 'amhyb', 'Ah.14g089460' => 'amhyb', 'AL1G41790' => 'aly', 'AL1G49050' => 'aly', 'AL1G53810' => 'aly', 'AL1G61400' => 'aly', 'AL4G18580' => 'aly', 'AL5G12510' => 'aly', 'AL5G12540' => 'aly', 'AL6G43230' => 'aly', 'AL7G10370' => 'aly', 'AL7G19250' => 'aly', 'AL8G12240' => 'aly', 'AL8G18540' => 'aly', 'Aqoxy1G02409' => 'aox', 'Aqoxy2G03993' => 'aox', 'Aqoxy3G03357' => 'aox', 'Aqoxy4G00785' => 'aox', 'Aqoxy5G02598' => 'aox', 'Aqoxy6G00132' => 'aox', 'Aqoxy7G01776' => 'aox', 'Aqoxy7G02316' => 'aox', 'Aqoxy7G03973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.12AFKW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B8730' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27IQR1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3F75VG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3RE0GA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41TCQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.527VTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FIR39' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5W8UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DA38EV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ63HS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H1I32C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HC27T5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4M8AP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7N3CZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9UVDZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LS1NQA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT1D4B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SKC4TM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCFV76' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF9Q1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQWD9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1ZM88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WE07RT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YCK7VH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJE6Q6' => 'arhy', 'AT1G28240' => 'ath', 'AT1G34550' => 'ath', 'AT1G53040' => 'ath', 'AT2G02910' => 'ath', 'AT4G09630' => 'ath', 'AT4G38500' => 'ath', 'AT5G42660' => 'ath', 'AT5G46220' => 'ath', 'ATR0152G026' => 'atr', 'ATR0564G343' => 'atr', 'ATR0706G151' => 'atr', 'ATR0733G207' => 'atr', 'ATR0751G234' => 'atr', 'ATR0807G048' => 'atr', 'ATR1091G084' => 'atr', 'Atru.chr10.1229' => 'acertr', 'Atru.chr10.1230' => 'acertr', 'Atru.chr10.1874' => 'acertr', 'Atru.chr11.1808' => 'acertr', 'Atru.chr13.1795' => 'acertr', 'Atru.chr13.570' => 'acertr', 'Atru.chr2.2608' => 'acertr', 'Atru.chr2.2609' => 'acertr', 'Atru.chr5.3428' => 'acertr', 'Atru.chr8.1171' => 'acertr', 'AUR62004651' => 'cqu', 'AUR62008675' => 'cqu', 'AUR62010014' => 'cqu', 'AUR62013004' => 'cqu', 'AUR62014825' => 'cqu', 'AUR62015015' => 'cqu', 'AUR62015151' => 'cqu', 'AUR62017020' => 'cqu', 'AUR62019422' => 'cqu', 'AUR62023570' => 'cqu', 'AUR62025571' => 'cqu', 'AUR62029098' => 'cqu', 'AUR62033863' => 'cqu', 'AUR62034296' => 'cqu', 'AUR62040075' => 'cqu', 'BcaB02g07334' => 'bca', 'BcaB02g10575' => 'bca', 'BcaB03g12119' => 'bca', 'BcaB03g12120' => 'bca', 'BcaB03g13945' => 'bca', 'BcaB04g17123' => 'bca', 'BcaB04g17867' => 'bca', 'BcaB04g19839' => 'bca', 'BcaB07g30317' => 'bca', 'BcaB07g32432' => 'bca', 'BcaB07g33362' => 'bca', 'BcaB08g36611' => 'bca', 'BcaC01g00028' => 'bca', 'BcaC01g01356' => 'bca', 'BcaC01g02034' => 'bca', 'BcaC01g06051' => 'bca', 'BcaC03g16839' => 'bca', 'BcaC03g17176' => 'bca', 'BcaC05g26829' => 'bca', 'BcaC06g31490' => 'bca', 'BcaC06g35344' => 'bca', 'BcaC06g36570' => 'bca', 'BcaC07g37537' => 'bca', 'BcaC08g43491' => 'bca', 'BcaC08g43773' => 'bca', 'BcaNung00234' => 'bca', 'BcaNung01982' => 'bca', 'BcaNung03707' => 'bca', 'BcaNung06454' => 'bca', 'BolC2t10762H' => 'bol', 'BolC2t11191H' => 'bol', 'BolC3t14322H' => 'bol', 'BolC3t19747H' => 'bol', 'BolC3t21425H' => 'bol', 'BolC4t27800H' => 'bol', 'BolC5t31423H' => 'bol', 'BolC6t35951H' => 'bol', 'BolC6t36282H' => 'bol', 'BolC7t40678H' => 'bol', 'BolC7t40679H' => 'bol', 'BolC7t42222H' => 'bol', 'BolC7t43492H' => 'bol', 'BolC7t46785H' => 'bol', 'BolC8t47853H' => 'bol', 'BolC9t56805H' => 'bol', 'BraA02t08000Z' => 'bra', 'BraA02t08341Z' => 'bra', 'BraA03t10936Z' => 'bra', 'BraA03t15657Z' => 'bra', 'BraA04t18100Z' => 'bra', 'BraA05t20523Z' => 'bra', 'BraA06t23353Z' => 'bra', 'BraA06t27473Z' => 'bra', 'BraA06t27769Z' => 'bra', 'BraA07t28928Z' => 'bra', 'BraA08t32236Z' => 'bra', 'BraA08t32841Z' => 'bra', 'BraA08t34524Z' => 'bra', 'BraA09t38742Z' => 'bra', 'BraA09t39295Z' => 'bra', 'C02p47180' => 'bna', 'C02p50990' => 'bna', 'C03p19360' => 'bna', 'C03p74950' => 'bna', 'C03p91000' => 'bna', 'C04p63260' => 'bna', 'C05p27050' => 'bna', 'C06p08750' => 'bna', 'C06p11490' => 'bna', 'C07p02820' => 'bna', 'C07p17180' => 'bna', 'C07p29440' => 'bna', 'C07p63730' => 'bna', 'C09p39260' => 'bna', 'CAN.G1164.34' => 'can', 'CAN.G1164.39' => 'can', 'CAN.G1530.3' => 'can', 'CAN.G162.61' => 'can', 'CAN.G176.6' => 'can', 'CAN.G289.49' => 'can', 'CAN.G370.21' => 'can', 'CAN.G370.22' => 'can', 'CAN.G371.117' => 'can', 'CAN.G58.37' => 'can', 'CAN.G588.98' => 'can', 'CANSAT21G2266' => 'cansat', 'CANSAT25G2799' => 'cansat', 'CANSAT35G0862' => 'cansat', 'CANSAT35G1704' => 'cansat', 'CANSAT35G1760' => 'cansat', 'CANSAT56G3971' => 'cansat', 'CANSAT56G4116' => 'cansat', 'CANSAT80G1259' => 'cansat', 'CARHR027730' => 'chi', 'CARHR033880' => 'chi', 'CARHR043270' => 'chi', 'CARHR145330' => 'chi', 'CARHR145340' => 'chi', 'CARHR175570' => 'chi', 'CARHR181570' => 'chi', 'CARHR258470' => 'chi', 'CARHR260490' => 'chi', 'CARHR294220' => 'chi', 'Carub.0001s2668' => 'cru', 'Carub.0001s3257' => 'cru', 'Carub.0001s4220' => 'cru', 'Carub.0005s0179' => 'cru', 'Carub.0006s2807' => 'cru', 'Carub.0007s0039' => 'cru', 'Carub.0008s0169' => 'cru', 'Carub.0008s0636' => 'cru', 'Ca_00338_v3' => 'car', 'Ca_00542_v3' => 'car', 'Ca_01844_v3' => 'car', 'Ca_10611_v3' => 'car', 'Ca_13326_v3' => 'car', 'Ca_17944_v3' => 'car', 'Ca_18546_v3' => 'car', 'Ca_24219_v3' => 'car', 'Ca_29972_v3' => 'car', 'CBR_g3681' => 'cbr', 'CBR_g40021' => 'cbr', 'Cc01_g08140' => 'ccan', 'Cc02_g13410' => 'ccan', 'Cc02_g37480' => 'ccan', 'Cc05_g12030' => 'ccan', 'Cc09_g03370' => 'ccan', 'Cc09_g10300' => 'ccan', 'Cc10_g03530' => 'ccan', 'Cc10_g11380' => 'ccan', 'CDE01G0176' => 'cde', 'CDE02G0675' => 'cde', 'CDE02G0942' => 'cde', 'CDE02G1153' => 'cde', 'CDE02G4177' => 'cde', 'CDE04G2117' => 'cde', 'CDE04G2736' => 'cde', 'CDE08G1161' => 'cde', 'CDE09G1238' => 'cde', 'Cfa000467' => 'cfa', 'Cfa000947' => 'cfa', 'Cfa004969' => 'cfa', 'Cfa005284' => 'cfa', 'Cfa008993' => 'cfa', 'Cfa018187' => 'cfa', 'Cfa018454' => 'cfa', 'Cfa020585' => 'cfa', 'Ciclev10000424m.g' => 'ccl', 'Ciclev10003605m.g' => 'ccl', 'Ciclev10007828m.g' => 'ccl', 'Ciclev10014620m.g' => 'ccl', 'Ciclev10015169m.g' => 'ccl', 'Ciclev10018291m.g' => 'ccl', 'Ciclev10028256m.g' => 'ccl', 'Ciclev10033822m.g' => 'ccl', 'CiPaw.05G060300' => 'cil', 'CiPaw.05G085000' => 'cil', 'CiPaw.06G083700' => 'cil', 'CiPaw.06G120300' => 'cil', 'CiPaw.09G060500' => 'cil', 'CiPaw.09G123800' => 'cil', 'CiPaw.11G169700' => 'cil', 'CiPaw.12G118300' => 'cil', 'CiPaw.15G071000' => 'cil', 'CiPaw.15G081900' => 'cil', 'ClCG01G024610' => 'cla', 'ClCG03G006070' => 'cla', 'ClCG05G019250' => 'cla', 'ClCG09G009500' => 'cla', 'ClCG11G008200' => 'cla', 'ClCG11G018080' => 'cla', 'COL.COLO4_17373' => 'col', 'COL.COLO4_22994' => 'col', 'COL.COLO4_26389' => 'col', 'COL.COLO4_27170' => 'col', 'COL.COLO4_31074' => 'col', 'COL.COLO4_31465' => 'col', 'COL.COLO4_36438' => 'col', 'COL.COLO4_36439' => 'col', 'Cpa.g.c38781' => 'cpa', 'Cpa.g.sc128.12' => 'cpa', 'Cpa.g.sc166.7' => 'cpa', 'Cpa.g.sc166.8' => 'cpa', 'Cpa.g.sc20.111' => 'cpa', 'Cpa.g.sc27.31' => 'cpa', 'Cpa.g.sc64.36' => 'cpa', 'Cpa.g.sc64.37' => 'cpa', 'Cpa.g.sc66.49' => 'cpa', 'Cpa.g.sc80.64' => 'cpa', 'CsaV3_1G012320' => 'csa', 'CsaV3_2G008480' => 'csa', 'CsaV3_2G033450' => 'csa', 'CsaV3_3G044830' => 'csa', 'CsaV3_4G033710' => 'csa', 'CsaV3_6G051730' => 'csa', 'CsaV3_7G025350' => 'csa', 'CSS0001067' => 'camsi', 'CSS0005996' => 'camsi', 'CSS0006590' => 'camsi', 'CSS0009673' => 'camsi', 'CSS0010201' => 'camsi', 'CSS0010549' => 'camsi', 'CSS0011364' => 'camsi', 'CSS0014473' => 'camsi', 'CSS0014961' => 'camsi', 'CSS0020191' => 'camsi', 'CSS0021165' => 'camsi', 'CSS0022306' => 'camsi', 'CSS0030591' => 'camsi', 'CSS0030696' => 'camsi', 'CSS0032653' => 'camsi', 'CSS0037487' => 'camsi', 'CSS0041102' => 'camsi', 'CSS0041261' => 'camsi', 'CSS0046246' => 'camsi', 'CSS0049256' => 'camsi', 'DCAR_004075' => 'dca', 'DCAR_011538' => 'dca', 'DCAR_019553' => 'dca', 'DCAR_020952' => 'dca', 'DCAR_021739' => 'dca', 'DCAR_027407' => 'dca', 'DCAR_027913' => 'dca', 'DCAR_028066' => 'dca', 'Dinv05899' => 'din', 'Dinv07563' => 'din', 'Dinv08010' => 'din', 'Dinv14125' => 'din', 'Dinv20172' => 'din', 'Dinv30743' => 'din', 'Dinv31229' => 'din', 'Dinv34162' => 'din', 'Dinv36028' => 'din', 'Dinv39368' => 'din', 'Dinv40565' => 'din', 'Dinv41706' => 'din', 'Duzib052G0089' => 'dzi', 'Duzib116G0641' => 'dzi', 'Duzib132G0069' => 'dzi', 'Duzib132G1219' => 'dzi', 'Duzib147G0278' => 'dzi', 'Duzib160G0480' => 'dzi', 'Duzib170G0661' => 'dzi', 'Duzib177G0591' => 'dzi', 'Duzib187G1353' => 'dzi', 'Duzib192G0858' => 'dzi', 'Duzib192G0883' => 'dzi', 'Duzib213G0506' => 'dzi', 'Duzib235G0289' => 'dzi', 'Duzib251G0422' => 'dzi', 'ECA232G3898' => 'eca', 'ECA233G5950' => 'eca', 'ECA234G1699' => 'eca', 'ECA234G2421' => 'eca', 'ECA236G0426' => 'eca', 'ECA236G4331' => 'eca', 'ECA248G2573' => 'eca', 'EL10Ac1g00077' => 'bvu', 'EL10Ac1g01746' => 'bvu', 'EL10Ac2g03464' => 'bvu', 'EL10Ac4g08176' => 'bvu', 'EL10Ac7g17521' => 'bvu', 'EL10Ac8g20386' => 'bvu', 'EL10Ac9g21343' => 'bvu', 'EL10Ac9g22688' => 'bvu', 'Eucgr.B03434' => 'egr', 'Eucgr.D00618' => 'egr', 'Eucgr.E02395' => 'egr', 'Eucgr.F01129' => 'egr', 'Eucgr.F02622' => 'egr', 'Eucgr.F04207' => 'egr', 'FAN01G0570' => 'fan', 'FAN03G3351' => 'fan', 'FAN06G3702' => 'fan', 'FAN07G2149' => 'fan', 'FAN10G3758' => 'fan', 'FAN11G1170' => 'fan', 'FAN11G2050' => 'fan', 'FAN11G2724' => 'fan', 'FAN12G1700' => 'fan', 'FAN12G2028' => 'fan', 'FAN15G1160' => 'fan', 'FAN15G3063' => 'fan', 'FAN16G2540' => 'fan', 'FAN16G3077' => 'fan', 'FAN16G3624' => 'fan', 'FAN17G0221' => 'fan', 'FAN20G2492' => 'fan', 'FAN20G2905' => 'fan', 'FAN21G0548' => 'fan', 'FAN21G1300' => 'fan', 'FAN22G0077' => 'fan', 'FAN22G1315' => 'fan', 'FAN24G1280' => 'fan', 'FAN24G1445' => 'fan', 'FAN24G3527' => 'fan', 'FAN25G0464' => 'fan', 'FAN25G2885' => 'fan', 'FAN25G3270' => 'fan', 'FAN27G1101' => 'fan', 'FAN27G2846' => 'fan', 'FAN27G3524' => 'fan', 'FvH4_2g11770' => 'fve', 'FvH4_2g15630' => 'fve', 'FvH4_3g05570' => 'fve', 'FvH4_3g09110' => 'fve', 'FvH4_3g19940' => 'fve', 'FvH4_4g04821' => 'fve', 'FvH4_4g31480' => 'fve', 'FvH4_7g01740' => 'fve', 'Glyma.05G130400' => 'gma', 'Glyma.05G156400' => 'gma', 'Glyma.07G197000' => 'gma', 'Glyma.08G085151' => 'gma', 'Glyma.08G114500' => 'gma', 'Glyma.08G300400' => 'gma', 'Glyma.10G215800' => 'gma', 'Glyma.12G224400' => 'gma', 'Glyma.13G179300' => 'gma', 'Glyma.13G218151' => 'gma', 'Glyma.13G238800' => 'gma', 'Glyma.13G276900' => 'gma', 'Glyma.14G078200' => 'gma', 'Glyma.15G074500' => 'gma', 'Glyma.15G094100' => 'gma', 'Glyma.17G247200' => 'gma', 'Glyma.18G120100' => 'gma', 'Glyma.20G176000' => 'gma', 'Gohir.A01G063600' => 'ghi', 'Gohir.A01G170301' => 'ghi', 'Gohir.A02G060500' => 'ghi', 'Gohir.A05G133850' => 'ghi', 'Gohir.A05G161400' => 'ghi', 'Gohir.A06G012900' => 'ghi', 'Gohir.A06G035901' => 'ghi', 'Gohir.A06G127100' => 'ghi', 'Gohir.A06G210500' => 'ghi', 'Gohir.A08G008650' => 'ghi', 'Gohir.A09G072700' => 'ghi', 'Gohir.A09G088301' => 'ghi', 'Gohir.A10G040600' => 'ghi', 'Gohir.A12G036300' => 'ghi', 'Gohir.A12G143350' => 'ghi', 'Gohir.A12G165500' => 'ghi', 'Gohir.A13G145700' => 'ghi', 'Gohir.D01G050000' => 'ghi', 'Gohir.D01G051366' => 'ghi', 'Gohir.D01G161350' => 'ghi', 'Gohir.D02G065900' => 'ghi', 'Gohir.D05G164200' => 'ghi', 'Gohir.D05G355500' => 'ghi', 'Gohir.D06G010400' => 'ghi', 'Gohir.D06G111250' => 'ghi', 'Gohir.D06G132000' => 'ghi', 'Gohir.D06G210500' => 'ghi', 'Gohir.D07G165675' => 'ghi', 'Gohir.D08G062240' => 'ghi', 'Gohir.D08G086101' => 'ghi', 'Gohir.D08G138060' => 'ghi', 'Gohir.D09G072300' => 'ghi', 'Gohir.D10G041400' => 'ghi', 'Gohir.D11G191020' => 'ghi', 'Gohir.D11G212066' => 'ghi', 'Gohir.D12G036300' => 'ghi', 'Gohir.D12G168600' => 'ghi', 'Gohir.D13G150600' => 'ghi', 'Gorai.001G057300' => 'gra', 'Gorai.002G069900' => 'gra', 'Gorai.002G200000' => 'gra', 'Gorai.003G067600' => 'gra', 'Gorai.005G074800' => 'gra', 'Gorai.006G087300' => 'gra', 'Gorai.008G037500' => 'gra', 'Gorai.008G181400' => 'gra', 'Gorai.009G169400' => 'gra', 'Gorai.009G387900' => 'gra', 'Gorai.010G013300' => 'gra', 'Gorai.010G153800' => 'gra', 'Gorai.010G255800' => 'gra', 'Gorai.011G043700' => 'gra', 'Gorai.011G198900' => 'gra', 'Gorai.013G168400' => 'gra', 'GSVIVG01005212001' => 'vvi', 'GSVIVG01006163001' => 'vvi', 'GSVIVG01009625001' => 'vvi', 'GSVIVG01014338001' => 'vvi', 'GSVIVG01020005001' => 'vvi', 'GSVIVG01021450001' => 'vvi', 'GSVIVG01023975001' => 'vvi', 'GSVIVG01034490001' => 'vvi', 'HanXRQChr04g0112071' => 'han', 'HanXRQChr05g0131151' => 'han', 'HanXRQChr09g0262371' => 'han', 'HanXRQChr09g0268401' => 'han', 'HanXRQChr10g0279241' => 'han', 'HanXRQChr10g0297961' => 'han', 'HanXRQChr11g0326231' => 'han', 'HanXRQChr11g0328471' => 'han', 'HanXRQChr16g0507941' => 'han', 'HanXRQChr17g0560211' => 'han', 'Haze_02108' => 'cav', 'Haze_02428' => 'cav', 'Haze_05593' => 'cav', 'Haze_06448' => 'cav', 'Haze_09427' => 'cav', 'Haze_12022' => 'cav', 'Haze_17612' => 'cav', 'Haze_17928' => 'cav', 'Hma1.2p1_0032F.1_g019250' => 'hma', 'Hma1.2p1_0163F.1_g072690' => 'hma', 'Hma1.2p1_0265F.1_g106710' => 'hma', 'Hma1.2p1_0286F.1_g113970' => 'hma', 'Hma1.2p1_0363F.1_g136640' => 'hma', 'Hma1.2p1_0584F.1_g183470' => 'hma', 'Hma1.2p1_0885F.1_g232570' => 'hma', 'HPP92_006022' => 'vpl', 'HPP92_007320' => 'vpl', 'HPP92_011521' => 'vpl', 'HPP92_019387' => 'vpl', 'HPP92_024038' => 'vpl', 'Hund05891' => 'sun', 'Hund06450' => 'sun', 'Hund12053' => 'sun', 'Hund16800' => 'sun', 'Hund21222' => 'sun', 'Hund22896' => 'sun', 'Hund23746' => 'sun', 'Hund27083' => 'sun', 'Lalb_Chr02g0141831' => 'lal', 'Lalb_Chr02g0141841' => 'lal', 'Lalb_Chr05g0220411' => 'lal', 'Lalb_Chr06g0162081' => 'lal', 'Lalb_Chr09g0327651' => 'lal', 'Lalb_Chr13g0295051' => 'lal', 'Lalb_Chr15g0086801' => 'lal', 'Lalb_Chr16g0383781' => 'lal', 'Lalb_Chr16g0383791' => 'lal', 'Lalb_Chr18g0055441' => 'lal', 'Lalb_Chr18g0059611' => 'lal', 'Lalb_Chr20g0109661' => 'lal', 'Lalb_Chr20g0109831' => 'lal', 'Lalb_Chr20g0121871' => 'lal', 'Lalb_Chr22g0355361' => 'lal', 'Lalb_Chr25g0286371' => 'lal', 'Lj1A1187G43' => 'lonja', 'Lj1A1205T50' => 'lonja', 'Lj1A800G33' => 'lonja', 'Lj1C1187T7' => 'lonja', 'Lj1C843T11' => 'lonja', 'Lj1g0010940' => 'lja', 'Lj2A288T69' => 'lonja', 'Lj3g0024276' => 'lja', 'Lj4A47T76' => 'lonja', 'Lj4g0005805' => 'lja', 'Lj4g0006097' => 'lja', 'Lj4g0008528' => 'lja', 'Lj4g0024907' => 'lja', 'Lj5g0012472' => 'lja', 'Lj5g0018648' => 'lja', 'Lj6C789G1' => 'lonja', 'Lj6g0004000' => 'lja', 'Lj7A292G67' => 'lonja', 'Lj7A292T64' => 'lonja', 'Lj9A400T58' => 'lonja', 'Lsat_1_v5_gn_1_126181' => 'lsa', 'Lsat_1_v5_gn_4_123041' => 'lsa', 'Lsat_1_v5_gn_4_133620' => 'lsa', 'Lsat_1_v5_gn_4_53221' => 'lsa', 'Lsat_1_v5_gn_4_71961' => 'lsa', 'Lsat_1_v5_gn_7_105241' => 'lsa', 'Lsat_1_v5_gn_7_21361' => 'lsa', 'Lsat_1_v5_gn_7_28860' => 'lsa', 'Lsat_1_v5_gn_7_31260' => 'lsa', 'Lsat_1_v5_gn_8_52801' => 'lsa', 'Manes.02G191400' => 'mes', 'Manes.03G110100' => 'mes', 'Manes.04G071100' => 'mes', 'Manes.05G100500' => 'mes', 'Manes.05G164700' => 'mes', 'Manes.15G087000' => 'mes', 'Manes.15G121500' => 'mes', 'Manes.16G028300' => 'mes', 'Manes.17G046100' => 'mes', 'Manes.17G069800' => 'mes', 'Manes.18G100500' => 'mes', 'Mapoly0002s0109' => 'mpo', 'Mapoly0024s0007' => 'mpo', 'Mapoly0089s0032' => 'mpo', 'MBI04_g42241_MAGBIO' => 'mbi', 'MBI05_g11988_MAGBIO' => 'mbi', 'MBI05_g35452_MAGBIO' => 'mbi', 'MBI07_g30179_MAGBIO' => 'mbi', 'MBI07_g35859_MAGBIO' => 'mbi', 'MBI07_g35860_MAGBIO' => 'mbi', 'MBI07_g37166_MAGBIO' => 'mbi', 'MBI08_g18172_MAGBIO' => 'mbi', 'MBI09_g08441_MAGBIO' => 'mbi', 'MBI13_g01676_MAGBIO' => 'mbi', 'MBI14_g42955_MAGBIO' => 'mbi', 'MBI16_g13161_MAGBIO' => 'mbi', 'MBI17_g27204_MAGBIO' => 'mbi', 'MBI19_g21595_MAGBIO' => 'mbi', 'MD00G1148400' => 'mdo', 'MD02G1301200' => 'mdo', 'MD03G1227800' => 'mdo', 'MD05G1041100' => 'mdo', 'MD05G1124800' => 'mdo', 'MD05G1284000' => 'mdo', 'MD05G1338800' => 'mdo', 'MD05G1338900' => 'mdo', 'MD07G1022800' => 'mdo', 'MD10G1047500' => 'mdo', 'MD10G1127500' => 'mdo', 'MD10G1262300' => 'mdo', 'MD10G1293800' => 'mdo', 'MD16G1074300' => 'mdo', 'Medtr1g021670' => 'mtr', 'Medtr1g096320' => 'mtr', 'Medtr2g013690' => 'mtr', 'Medtr2g019450' => 'mtr', 'Medtr2g085170' => 'mtr', 'Medtr4g088785' => 'mtr', 'Medtr8g055930' => 'mtr', 'Medtr8g085850' => 'mtr', 'MELO3C002605.2' => 'cme', 'MELO3C003891.2' => 'cme', 'MELO3C004012.2' => 'cme', 'MELO3C007134.2' => 'cme', 'MELO3C008118.2' => 'cme', 'MELO3C016700.2' => 'cme', 'MELO3C024127.2' => 'cme', 'MELO3C033361.2' => 'cme', 'MELO3C033362.2' => 'cme', 'Migut.C00430' => 'egut', 'Migut.C01246' => 'egut', 'Migut.E00101' => 'egut', 'Migut.H01486' => 'egut', 'Migut.H01939' => 'egut', 'Migut.K00360' => 'egut', 'Migut.M00910' => 'egut', 'Migut.M01139' => 'egut', 'Migut.N02677' => 'egut', 'MSTRG.13252' => 'ama', 'MSTRG.14701' => 'ama', 'MSTRG.1521' => 'ama', 'MSTRG.15884' => 'ama', 'MSTRG.16242' => 'ama', 'MSTRG.22285' => 'ama', 'MSTRG.22444' => 'ama', 'MSTRG.2349' => 'ama', 'MSTRG.26308' => 'ama', 'MSTRG.28296' => 'ama', 'MSTRG.9895' => 'ama', 'Nitab4.5_0000110g0060' => 'nta', 'Nitab4.5_0000420g0130' => 'nta', 'Nitab4.5_0000422g0030' => 'nta', 'Nitab4.5_0000560g0180' => 'nta', 'Nitab4.5_0000703g0100' => 'nta', 'Nitab4.5_0000786g0200' => 'nta', 'Nitab4.5_0001336g0020' => 'nta', 'Nitab4.5_0001796g0030' => 'nta', 'Nitab4.5_0003348g0060' => 'nta', 'Nitab4.5_0003698g0040' => 'nta', 'Nitab4.5_0003942g0090' => 'nta', 'Nitab4.5_0004775g0070' => 'nta', 'Nitab4.5_0004864g0030' => 'nta', 'Nitab4.5_0005615g0020' => 'nta', 'Nitab4.5_0009288g0030' => 'nta', 'Nitab4.5_0009341g0010' => 'nta', 'Nitab4.5_0009535g0010' => 'nta', 'Nn1g03995' => 'nnu', 'Nn1g04100' => 'nnu', 'Nn1g06530' => 'nnu', 'Nn3g16404' => 'nnu', 'Nn3g17212' => 'nnu', 'Nn3g20776' => 'nnu', 'Nn3g21923' => 'nnu', 'Nn5g27737' => 'nnu', 'Nn5g29461' => 'nnu', 'Nn7g38355' => 'nnu', 'Nn8g39873' => 'nnu', 'Oeu000548.2' => 'oeu', 'Oeu004672.1' => 'oeu', 'Oeu015605.2' => 'oeu', 'Oeu016092.1' => 'oeu', 'Oeu017879.3' => 'oeu', 'Oeu024910.1' => 'oeu', 'Oeu028965.1' => 'oeu', 'Oeu031269.1' => 'oeu', 'Oeu031270.1' => 'oeu', 'Oeu032535.1' => 'oeu', 'Oeu034151.1' => 'oeu', 'Oeu034152.1' => 'oeu', 'Oeu034588.2' => 'oeu', 'Oeu050846.1' => 'oeu', 'Oeu050849.2' => 'oeu', 'Oeu051063.2' => 'oeu', 'Oeu052368.1' => 'oeu', 'Oeu052370.1' => 'oeu', 'Os01g0210400' => 'osa', 'Os01g0304300' => 'osa', 'Os01g0749100' => 'osa', 'Os02g0745800' => 'osa', 'Os03g0769050' => 'osa', 'Os05g0531500' => 'osa', 'Os06g0724300' => 'osa', 'Os11g0198100' => 'osa', 'Peaxi162Scf00069g01425' => 'pax', 'Peaxi162Scf00280g00811' => 'pax', 'Peaxi162Scf00310g00615' => 'pax', 'Peaxi162Scf00362g00542' => 'pax', 'Peaxi162Scf00461g00310' => 'pax', 'Peaxi162Scf00530g00118' => 'pax', 'Peaxi162Scf00541g00057' => 'pax', 'Peaxi162Scf00661g00017' => 'pax', 'Peaxi162Scf00926g00027' => 'pax', 'Peaxi162Scf01064g00263' => 'pax', 'Peaxi162Scf01211g00135' => 'pax', 'PGR004G2336' => 'pgr', 'PGR042G0327' => 'pgr', 'PGR042G1957' => 'pgr', 'PGR042G2003' => 'pgr', 'PGR042G3929' => 'pgr', 'PGR083G1137' => 'pgr', 'PGR083G1364' => 'pgr', 'PGSC0003DMG400003381' => 'stu', 'PGSC0003DMG400003417' => 'stu', 'PGSC0003DMG400008981' => 'stu', 'PGSC0003DMG400012417' => 'stu', 'PGSC0003DMG400012823' => 'stu', 'PGSC0003DMG400016885' => 'stu', 'PGSC0003DMG400022812' => 'stu', 'PGSC0003DMG400029726' => 'stu', 'PGSC0003DMG401009243' => 'stu', 'PGSC0003DMG401031505' => 'stu', 'PGSC0003DMG402031505' => 'stu', 'Phvul.001G017600' => 'pvu', 'Phvul.002G193500' => 'pvu', 'Phvul.002G228900' => 'pvu', 'Phvul.002G236800' => 'pvu', 'Phvul.003G049500' => 'pvu', 'Phvul.005G072000' => 'pvu', 'Phvul.006G164800' => 'pvu', 'Phvul.006G185100' => 'pvu', 'Phvul.007G090000' => 'pvu', 'Potri.001G399800' => 'ptr', 'Potri.002G149900' => 'ptr', 'Potri.004G044100' => 'ptr', 'Potri.004G177600' => 'ptr', 'Potri.009G138000' => 'ptr', 'Potri.010G094000' => 'ptr', 'Potri.011G053000' => 'ptr', 'Potri.011G119300' => 'ptr', 'Potri.013G113700' => 'ptr', 'Potri.018G107800' => 'ptr', 'Potri.019G084100' => 'ptr', 'Pp3c14_23720' => 'ppa', 'Pp3c16_6340' => 'ppa', 'Pp3c23_13420' => 'ppa', 'Pp3c24_2740' => 'ppa', 'Pp3c25_860' => 'ppa', 'Pp3c8_21750' => 'ppa', 'Prupe.1G273000' => 'ppe', 'Prupe.1G273700' => 'ppe', 'Prupe.1G274100' => 'ppe', 'Prupe.2G023300' => 'ppe', 'Prupe.4G048000' => 'ppe', 'Prupe.4G080400' => 'ppe', 'Prupe.4G181200' => 'ppe', 'Prupe.8G056900' => 'ppe', 'Prupe.8G168700' => 'ppe', 'Psat1g189080' => 'psa', 'Psat1g204760' => 'psa', 'Psat4g175560' => 'psa', 'Psat4g177720' => 'psa', 'Psat5g244240' => 'psa', 'Psat6g010720' => 'psa', 'Psat6g187200' => 'psa', 'Psat7g072040' => 'psa', 'PSO017G3501' => 'pso', 'PSO063G2148' => 'pso', 'PSO063G5608' => 'pso', 'PSO210G6392' => 'pso', 'PSO541G2319' => 'pso', 'PSO541G2836' => 'pso', 'PSO541G4012' => 'pso', 'PSO541G6253' => 'pso', 'PSO675G0580' => 'pso', 'PSO675G0856' => 'pso', 'PSO675G5635' => 'pso', 'PSO675G9157' => 'pso', 'PSO832G1660' => 'pso', 'PSO832G1969' => 'pso', 'QL02p007186' => 'qlo', 'QL02p033904' => 'qlo', 'QL03p064391' => 'qlo', 'QL05p040593' => 'qlo', 'QL05p058242' => 'qlo', 'QL08p021825' => 'qlo', 'QL11p004981' => 'qlo', 'RcHm_v2.0_Chr1g0318301' => 'rch', 'RcHm_v2.0_Chr4g0418501' => 'rch', 'RcHm_v2.0_Chr4g0439971' => 'rch', 'RcHm_v2.0_Chr5g0008541' => 'rch', 'RcHm_v2.0_Chr5g0014101' => 'rch', 'RcHm_v2.0_Chr5g0014131' => 'rch', 'RcHm_v2.0_Chr5g0033621' => 'rch', 'RcHm_v2.0_Chr6g0272041' => 'rch', 'RcHm_v2.0_Chr6g0278831' => 'rch', 'Rhsim02G0130400' => 'rsi', 'Rhsim02G0171100' => 'rsi', 'Rhsim05G0053000' => 'rsi', 'Rhsim05G0053100' => 'rsi', 'Rhsim06G0096500' => 'rsi', 'Rhsim06G0096600' => 'rsi', 'Rhsim06G0199100' => 'rsi', 'Rhsim12G0062300' => 'rsi', 'Rhsim12G0062800' => 'rsi', 'Sabra02G0118600' => 'sbr', 'Sabra04G0027300' => 'sbr', 'Sabra04G0119500' => 'sbr', 'Sabra08G0112500' => 'sbr', 'Sabra11G0036800' => 'sbr', 'Sabra11G0103800' => 'sbr', 'Sabra13G0096300' => 'sbr', 'Sabra16G0262300' => 'sbr', 'Sabra18G0091700' => 'sbr', 'Sabra19G0095400' => 'sbr', 'SalBow6G3080' => 'sbo', 'SalBow7G1157' => 'sbo', 'SalBow7G2123' => 'sbo', 'SalBow7G2285' => 'sbo', 'SalBow7G3537' => 'sbo', 'SalBow8G2947' => 'sbo', 'SalBow8G4463' => 'sbo', 'SalBow8G5466' => 'sbo', 'Sc01g0001750' => 'sci', 'Sc02g0006640' => 'sci', 'Sc02g0006670' => 'sci', 'Sc04g0008220' => 'sci', 'Sc05g0006190' => 'sci', 'Sc08g0002760' => 'sci', 'Sc17g0006170' => 'sci', 'Sc22g0002050' => 'sci', 'Sc23g0001190' => 'sci', 'Sc24g0000980' => 'sci', 'Sed0006245' => 'sed', 'Sed0007543' => 'sed', 'Sed0009411' => 'sed', 'Sed0010765' => 'sed', 'Sed0012944' => 'sed', 'Sed0014682' => 'sed', 'Sed0016174' => 'sed', 'Sed0016796' => 'sed', 'Sed0020317' => 'sed', 'Sed0021467' => 'sed', 'SEGI_01316' => 'sgi', 'SEGI_03374' => 'sgi', 'SEGI_16265' => 'sgi', 'SEGI_18569' => 'sgi', 'SEGI_20351' => 'sgi', 'SEGI_26395' => 'sgi', 'SEGI_29469' => 'sgi', 'SEGI_34771' => 'sgi', 'SEGI_36769' => 'sgi', 'SEGI_37139' => 'sgi', 'SGA_v2.0_scaffold100G29687' => 'sas', 'SGA_v2.0_scaffold118G32472' => 'sas', 'SGA_v2.0_scaffold14G07051' => 'sas', 'SGA_v2.0_scaffold183G39845' => 'sas', 'SGA_v2.0_scaffold1G00174' => 'sas', 'SGA_v2.0_scaffold22G09714' => 'sas', 'SGA_v2.0_scaffold333G48992' => 'sas', 'SGA_v2.0_scaffold46G17491' => 'sas', 'SGA_v2.0_scaffold49G18294' => 'sas', 'SGA_v2.0_scaffold63G21658' => 'sas', 'SHI01741' => 'shi', 'SHI05771' => 'shi', 'SHI18077' => 'shi', 'SHI20525' => 'shi', 'SHI20527' => 'shi', 'SHI20528' => 'shi', 'SMO172G0185' => 'smo', 'SMO198G0020' => 'smo', 'SMO351G0006' => 'smo', 'SMO356G0118' => 'smo', 'SMO358G0296' => 'smo', 'SMO367G0079' => 'smo', 'SMO367G1277' => 'smo', 'Solyc01g014220.3' => 'sly', 'Solyc01g111770.2' => 'sly', 'Solyc02g078180.3' => 'sly', 'Solyc03g006430.3' => 'sly', 'Solyc03g006456.1' => 'sly', 'Solyc03g079860.2' => 'sly', 'Solyc04g079770.3' => 'sly', 'Solyc05g007430.4' => 'sly', 'Solyc07g063150.3' => 'sly', 'Solyc08g016620.3' => 'sly', 'Solyc09g057590.3' => 'sly', 'Solyc09g057600.1' => 'sly', 'Solyc10g009050.3' => 'sly', 'Solyc11g017420.2' => 'sly', 'Sopen01g053810' => 'spe', 'Sopen02g023040' => 'spe', 'Sopen03g002440' => 'spe', 'Sopen04g033350' => 'spe', 'Sopen05g003310' => 'spe', 'Sopen07g004050' => 'spe', 'Sopen07g031340' => 'spe', 'Sopen08g006990' => 'spe', 'Sopen10g004830' => 'spe', 'Sopen11g009370' => 'spe', 'Sp1g24450' => 'spa', 'Sp1g29670' => 'spa', 'Sp1g39600' => 'spa', 'Sp2g11080' => 'spa', 'Sp2g13970' => 'spa', 'Sp4g16130' => 'spa', 'Sp6g13080' => 'spa', 'Sp7g37270' => 'spa', 'TAR371G0065' => 'tar', 'TAR376G0340' => 'tar', 'TAR376G0435' => 'tar', 'TAR381G0002' => 'tar', 'TAR381G1236' => 'tar', 'TAR624G0055' => 'tar', 'TAR624G0324' => 'tar', 'TAR624G0696' => 'tar', 'TAR624G0906' => 'tar', 'TAR625G0107' => 'tar', 'TAR626G0015' => 'tar', 'TAR626G1356' => 'tar', 'TAR627G0888' => 'tar', 'TAR628G0399' => 'tar', 'TAR628G1327' => 'tar', 'TAR629G2831' => 'tar', 'TAR629G2874' => 'tar', 'TAR633G1432' => 'tar', 'TAR633G2771' => 'tar', 'THA.LOC104803394' => 'tha', 'THA.LOC104805153' => 'tha', 'THA.LOC104806784' => 'tha', 'THA.LOC104810473' => 'tha', 'THA.LOC104813100' => 'tha', 'THA.LOC104814215' => 'tha', 'THA.LOC104815554' => 'tha', 'THA.LOC104820544' => 'tha', 'THA.LOC104824754' => 'tha', 'THA.LOC104827717' => 'tha', 'Thecc.02G031400' => 'tca', 'Thecc.02G055900' => 'tca', 'Thecc.02G350800' => 'tca', 'Thecc.06G150900' => 'tca', 'Thecc.06G186600' => 'tca', 'Thecc.07G089600' => 'tca', 'Thecc.08G020400' => 'tca', 'Thecc.08G182100' => 'tca', 'Thhalv10000873m.g' => 'esa', 'Thhalv10004185m.g' => 'esa', 'Thhalv10006981m.g' => 'esa', 'Thhalv10007204m.g' => 'esa', 'Thhalv10011374m.g' => 'esa', 'Thhalv10013482m.g' => 'esa', 'Thhalv10017801m.g' => 'esa', 'Thhalv10024983m.g' => 'esa', 'TPR.G12072' => 'tpr', 'TPR.G15769' => 'tpr', 'TPR.G16504' => 'tpr', 'TPR.G16506' => 'tpr', 'TPR.G24345' => 'tpr', 'TPR.G26666' => 'tpr', 'TPR.G27320' => 'tpr', 'TPR.G31819' => 'tpr', 'TPR.G38879' => 'tpr', 'TPR.G39015' => 'tpr', 'TPR.G8819' => 'tpr', 'TWI09G0924' => 'twi', 'TWI12G0811' => 'twi', 'TWI12G1294' => 'twi', 'TWI31G0150' => 'twi', 'TWI36G1262' => 'twi', 'TWI38G1287' => 'twi', 'TWI38G1633' => 'twi', 'TWI38G1982' => 'twi', 'TWI39G0116' => 'twi', 'TWI60G1011' => 'twi', 'TWI63G0171' => 'twi', 'TWI73G0839' => 'twi', 'TWI79G1511' => 'twi', 'unitig_0.g915' => 'ugi', 'unitig_0.g916' => 'ugi', 'unitig_21.g20219' => 'ugi', 'unitig_21.g20416' => 'ugi', 'unitig_578.g16132' => 'ugi', 'unitig_578.g16718' => 'ugi', 'unitig_62.g23481' => 'ugi', 'unitig_744.g24535' => 'ugi', 'unitig_749.g13525' => 'ugi', 'vmacro01248' => 'vma', 'vmacro02290' => 'vma', 'vmacro10946' => 'vma', 'vmacro11865' => 'vma', 'vmacro12493' => 'vma', 'vmacro17322' => 'vma', 'vmacro21599' => 'vma', 'vmacro23041' => 'vma', 'VMungo0251G0004' => 'vmu', 'VMungo0251G2639' => 'vmu', 'VMungo0251G2967' => 'vmu', 'VMungo0540G0864' => 'vmu', 'VMungo0540G1569' => 'vmu', 'VMungo0647G0317' => 'vmu', 'VMungo0720G1373' => 'vmu', 'VMungo0720G1508' => 'vmu', 'VMungo1080G0485' => 'vmu', 'VMungo1215G3177' => 'vmu', 'Zm00001eb112600' => 'zma', 'Zm00001eb120220' => 'zma', 'Zm00001eb153240' => 'zma', 'Zm00001eb168880' => 'zma', 'Zm00001eb213920' => 'zma', 'Zm00001eb228280' => 'zma', 'Zm00001eb254580' => 'zma', 'Zm00001eb272180' => 'zma', 'Zm00001eb293190' => 'zma', 'Zm00001eb322930' => 'zma', 'Zm00001eb353360' => 'zma', 'Zm00001eb353390' => 'zma', 'Zm00001eb353430' => 'zma', 'Zm00001eb353440' => 'zma', 'Zm00001eb353780' => 'zma' ), 'gf_id' => 'HOM05D000499', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000499' ), 'data_identifier' => 'HOM05D000499', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000499', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1066', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p29780' => 'bna', 'A02p33180' => 'bna', 'A03p16470' => 'bna', 'A03p66010' => 'bna', 'A04p25970' => 'bna', 'A06p01270' => 'bna', 'A06p46080' => 'bna', 'A07p11400' => 'bna', 'A08p01840' => 'bna', 'A08p08230' => 'bna', 'A08p25740' => 'bna', 'A09p32070' => 'bna', 'A09p37830' => 'bna', 'A09p42840' => 'bna', 'A09p42850' => 'bna', 'Aa31LG10G2060' => 'aar', 'Aa31LG2G7410' => 'aar', 'Aa31LG6G10200' => 'aar', 'Aa31LG6G16680' => 'aar', 'Aa31LG6G8470' => 'aar', 'Aa31LG9G12730' => 'aar', 'Aa31LG9G13680' => 'aar', 'Aa31LG9G14920' => 'aar', 'Aa31LG9G6650' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4977' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5467' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3254' => 'aag', 'Actinidia02578' => 'ach', 'Actinidia07693' => 'ach', 'Actinidia08413' => 'ach', 'Actinidia08414' => 'ach', 'Actinidia15289' => 'ach', 'Actinidia19871' => 'ach', 'Actinidia21475' => 'ach', 'Actinidia22576' => 'ach', 'Actinidia28327' => 'ach', 'Actinidia32491' => 'ach', 'Actinidia39463' => 'ach', 'Actinidia39571' => 'ach', 'Ah.01g013750' => 'amhyb', 'Ah.01g023210' => 'amhyb', 'Ah.04g164850' => 'amhyb', 'Ah.05g178060' => 'amhyb', 'Ah.07g204270' => 'amhyb', 'Ah.07g208480' => 'amhyb', 'Ah.09g237410' => 'amhyb', 'Ah.14g089460' => 'amhyb', 'AL1G41790' => 'aly', 'AL1G49050' => 'aly', 'AL1G53810' => 'aly', 'AL1G61400' => 'aly', 'AL4G18580' => 'aly', 'AL5G12510' => 'aly', 'AL5G12540' => 'aly', 'AL6G43230' => 'aly', 'AL7G10370' => 'aly', 'AL7G19250' => 'aly', 'AL8G12240' => 'aly', 'AL8G18540' => 'aly', 'Aqoxy1G02409' => 'aox', 'Aqoxy2G03993' => 'aox', 'Aqoxy3G03357' => 'aox', 'Aqoxy4G00785' => 'aox', 'Aqoxy5G02598' => 'aox', 'Aqoxy6G00132' => 'aox', 'Aqoxy7G01776' => 'aox', 'Aqoxy7G02316' => 'aox', 'Aqoxy7G03973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.12AFKW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B8730' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27IQR1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3F75VG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3RE0GA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41TCQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.527VTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FIR39' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5W8UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DA38EV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ63HS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H1I32C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HC27T5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4M8AP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7N3CZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9UVDZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LS1NQA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT1D4B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SKC4TM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCFV76' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF9Q1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQWD9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1ZM88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WE07RT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YCK7VH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJE6Q6' => 'arhy', 'AT1G28240' => 'ath', 'AT1G34550' => 'ath', 'AT1G53040' => 'ath', 'AT2G02910' => 'ath', 'AT4G09630' => 'ath', 'AT4G38500' => 'ath', 'AT5G42660' => 'ath', 'AT5G46220' => 'ath', 'ATR0152G026' => 'atr', 'ATR0564G343' => 'atr', 'ATR0706G151' => 'atr', 'ATR0733G207' => 'atr', 'ATR0751G234' => 'atr', 'ATR0807G048' => 'atr', 'ATR1091G084' => 'atr', 'Atru.chr10.1229' => 'acertr', 'Atru.chr10.1230' => 'acertr', 'Atru.chr10.1874' => 'acertr', 'Atru.chr11.1808' => 'acertr', 'Atru.chr13.1795' => 'acertr', 'Atru.chr13.570' => 'acertr', 'Atru.chr2.2608' => 'acertr', 'Atru.chr2.2609' => 'acertr', 'Atru.chr5.3428' => 'acertr', 'Atru.chr8.1171' => 'acertr', 'AUR62004651' => 'cqu', 'AUR62008675' => 'cqu', 'AUR62010014' => 'cqu', 'AUR62013004' => 'cqu', 'AUR62014825' => 'cqu', 'AUR62015015' => 'cqu', 'AUR62015151' => 'cqu', 'AUR62017020' => 'cqu', 'AUR62019422' => 'cqu', 'AUR62023570' => 'cqu', 'AUR62025571' => 'cqu', 'AUR62029098' => 'cqu', 'AUR62033863' => 'cqu', 'AUR62034296' => 'cqu', 'AUR62040075' => 'cqu', 'BcaB02g07334' => 'bca', 'BcaB02g10575' => 'bca', 'BcaB03g12119' => 'bca', 'BcaB03g12120' => 'bca', 'BcaB03g13945' => 'bca', 'BcaB04g17123' => 'bca', 'BcaB04g17867' => 'bca', 'BcaB04g19839' => 'bca', 'BcaB07g30317' => 'bca', 'BcaB07g32432' => 'bca', 'BcaB07g33362' => 'bca', 'BcaB08g36611' => 'bca', 'BcaC01g00028' => 'bca', 'BcaC01g01356' => 'bca', 'BcaC01g02034' => 'bca', 'BcaC01g06051' => 'bca', 'BcaC03g16839' => 'bca', 'BcaC03g17176' => 'bca', 'BcaC05g26829' => 'bca', 'BcaC06g31490' => 'bca', 'BcaC06g35344' => 'bca', 'BcaC06g36570' => 'bca', 'BcaC07g37537' => 'bca', 'BcaC08g43491' => 'bca', 'BcaC08g43773' => 'bca', 'BcaNung00234' => 'bca', 'BcaNung01982' => 'bca', 'BcaNung03707' => 'bca', 'BcaNung06454' => 'bca', 'BolC2t10762H' => 'bol', 'BolC2t11191H' => 'bol', 'BolC3t14322H' => 'bol', 'BolC3t19747H' => 'bol', 'BolC3t21425H' => 'bol', 'BolC4t27800H' => 'bol', 'BolC5t31423H' => 'bol', 'BolC6t35951H' => 'bol', 'BolC6t36282H' => 'bol', 'BolC7t40678H' => 'bol', 'BolC7t40679H' => 'bol', 'BolC7t42222H' => 'bol', 'BolC7t43492H' => 'bol', 'BolC7t46785H' => 'bol', 'BolC8t47853H' => 'bol', 'BolC9t56805H' => 'bol', 'BraA02t08000Z' => 'bra', 'BraA02t08341Z' => 'bra', 'BraA03t10936Z' => 'bra', 'BraA03t15657Z' => 'bra', 'BraA04t18100Z' => 'bra', 'BraA05t20523Z' => 'bra', 'BraA06t23353Z' => 'bra', 'BraA06t27473Z' => 'bra', 'BraA06t27769Z' => 'bra', 'BraA07t28928Z' => 'bra', 'BraA08t32236Z' => 'bra', 'BraA08t32841Z' => 'bra', 'BraA08t34524Z' => 'bra', 'BraA09t38742Z' => 'bra', 'BraA09t39295Z' => 'bra', 'C02p47180' => 'bna', 'C02p50990' => 'bna', 'C03p19360' => 'bna', 'C03p74950' => 'bna', 'C03p91000' => 'bna', 'C04p63260' => 'bna', 'C05p27050' => 'bna', 'C06p08750' => 'bna', 'C06p11490' => 'bna', 'C07p02820' => 'bna', 'C07p17180' => 'bna', 'C07p29440' => 'bna', 'C07p63730' => 'bna', 'C09p39260' => 'bna', 'CAN.G1164.34' => 'can', 'CAN.G1164.39' => 'can', 'CAN.G1530.3' => 'can', 'CAN.G162.61' => 'can', 'CAN.G176.6' => 'can', 'CAN.G289.49' => 'can', 'CAN.G370.21' => 'can', 'CAN.G370.22' => 'can', 'CAN.G371.117' => 'can', 'CAN.G58.37' => 'can', 'CAN.G588.98' => 'can', 'CANSAT21G2266' => 'cansat', 'CANSAT25G2799' => 'cansat', 'CANSAT35G0862' => 'cansat', 'CANSAT35G1704' => 'cansat', 'CANSAT35G1760' => 'cansat', 'CANSAT56G3971' => 'cansat', 'CANSAT56G4116' => 'cansat', 'CANSAT80G1259' => 'cansat', 'CARHR027730' => 'chi', 'CARHR033880' => 'chi', 'CARHR043270' => 'chi', 'CARHR145330' => 'chi', 'CARHR145340' => 'chi', 'CARHR175570' => 'chi', 'CARHR181570' => 'chi', 'CARHR258470' => 'chi', 'CARHR260490' => 'chi', 'CARHR294220' => 'chi', 'Carub.0001s2668' => 'cru', 'Carub.0001s3257' => 'cru', 'Carub.0001s4220' => 'cru', 'Carub.0005s0179' => 'cru', 'Carub.0006s2807' => 'cru', 'Carub.0007s0039' => 'cru', 'Carub.0008s0169' => 'cru', 'Carub.0008s0636' => 'cru', 'Ca_00338_v3' => 'car', 'Ca_00542_v3' => 'car', 'Ca_01844_v3' => 'car', 'Ca_10611_v3' => 'car', 'Ca_13326_v3' => 'car', 'Ca_17944_v3' => 'car', 'Ca_18546_v3' => 'car', 'Ca_24219_v3' => 'car', 'Ca_29972_v3' => 'car', 'CBR_g3681' => 'cbr', 'CBR_g40021' => 'cbr', 'Cc01_g08140' => 'ccan', 'Cc02_g13410' => 'ccan', 'Cc02_g37480' => 'ccan', 'Cc05_g12030' => 'ccan', 'Cc09_g03370' => 'ccan', 'Cc09_g10300' => 'ccan', 'Cc10_g03530' => 'ccan', 'Cc10_g11380' => 'ccan', 'CDE01G0176' => 'cde', 'CDE02G0675' => 'cde', 'CDE02G0942' => 'cde', 'CDE02G1153' => 'cde', 'CDE02G4177' => 'cde', 'CDE04G2117' => 'cde', 'CDE04G2736' => 'cde', 'CDE08G1161' => 'cde', 'CDE09G1238' => 'cde', 'Cfa000467' => 'cfa', 'Cfa000947' => 'cfa', 'Cfa004969' => 'cfa', 'Cfa005284' => 'cfa', 'Cfa008993' => 'cfa', 'Cfa018187' => 'cfa', 'Cfa018454' => 'cfa', 'Cfa020585' => 'cfa', 'Ciclev10000424m.g' => 'ccl', 'Ciclev10003605m.g' => 'ccl', 'Ciclev10007828m.g' => 'ccl', 'Ciclev10014620m.g' => 'ccl', 'Ciclev10015169m.g' => 'ccl', 'Ciclev10018291m.g' => 'ccl', 'Ciclev10028256m.g' => 'ccl', 'Ciclev10033822m.g' => 'ccl', 'CiPaw.05G060300' => 'cil', 'CiPaw.05G085000' => 'cil', 'CiPaw.06G083700' => 'cil', 'CiPaw.06G120300' => 'cil', 'CiPaw.09G060500' => 'cil', 'CiPaw.09G123800' => 'cil', 'CiPaw.11G169700' => 'cil', 'CiPaw.12G118300' => 'cil', 'CiPaw.15G071000' => 'cil', 'CiPaw.15G081900' => 'cil', 'ClCG01G024610' => 'cla', 'ClCG03G006070' => 'cla', 'ClCG05G019250' => 'cla', 'ClCG09G009500' => 'cla', 'ClCG11G008200' => 'cla', 'ClCG11G018080' => 'cla', 'COL.COLO4_17373' => 'col', 'COL.COLO4_22994' => 'col', 'COL.COLO4_26389' => 'col', 'COL.COLO4_27170' => 'col', 'COL.COLO4_31074' => 'col', 'COL.COLO4_31465' => 'col', 'COL.COLO4_36438' => 'col', 'COL.COLO4_36439' => 'col', 'Cpa.g.c38781' => 'cpa', 'Cpa.g.sc128.12' => 'cpa', 'Cpa.g.sc166.7' => 'cpa', 'Cpa.g.sc166.8' => 'cpa', 'Cpa.g.sc20.111' => 'cpa', 'Cpa.g.sc27.31' => 'cpa', 'Cpa.g.sc64.36' => 'cpa', 'Cpa.g.sc64.37' => 'cpa', 'Cpa.g.sc66.49' => 'cpa', 'Cpa.g.sc80.64' => 'cpa', 'CsaV3_1G012320' => 'csa', 'CsaV3_2G008480' => 'csa', 'CsaV3_2G033450' => 'csa', 'CsaV3_3G044830' => 'csa', 'CsaV3_4G033710' => 'csa', 'CsaV3_6G051730' => 'csa', 'CsaV3_7G025350' => 'csa', 'CSS0001067' => 'camsi', 'CSS0005996' => 'camsi', 'CSS0006590' => 'camsi', 'CSS0009673' => 'camsi', 'CSS0010201' => 'camsi', 'CSS0010549' => 'camsi', 'CSS0011364' => 'camsi', 'CSS0014473' => 'camsi', 'CSS0014961' => 'camsi', 'CSS0020191' => 'camsi', 'CSS0021165' => 'camsi', 'CSS0022306' => 'camsi', 'CSS0030591' => 'camsi', 'CSS0030696' => 'camsi', 'CSS0032653' => 'camsi', 'CSS0037487' => 'camsi', 'CSS0041102' => 'camsi', 'CSS0041261' => 'camsi', 'CSS0046246' => 'camsi', 'CSS0049256' => 'camsi', 'DCAR_004075' => 'dca', 'DCAR_011538' => 'dca', 'DCAR_019553' => 'dca', 'DCAR_020952' => 'dca', 'DCAR_021739' => 'dca', 'DCAR_027407' => 'dca', 'DCAR_027913' => 'dca', 'DCAR_028066' => 'dca', 'Dinv05899' => 'din', 'Dinv07563' => 'din', 'Dinv08010' => 'din', 'Dinv14125' => 'din', 'Dinv20172' => 'din', 'Dinv30743' => 'din', 'Dinv31229' => 'din', 'Dinv34162' => 'din', 'Dinv36028' => 'din', 'Dinv39368' => 'din', 'Dinv40565' => 'din', 'Dinv41706' => 'din', 'Duzib052G0089' => 'dzi', 'Duzib116G0641' => 'dzi', 'Duzib132G0069' => 'dzi', 'Duzib132G1219' => 'dzi', 'Duzib147G0278' => 'dzi', 'Duzib160G0480' => 'dzi', 'Duzib170G0661' => 'dzi', 'Duzib177G0591' => 'dzi', 'Duzib187G1353' => 'dzi', 'Duzib192G0858' => 'dzi', 'Duzib192G0883' => 'dzi', 'Duzib213G0506' => 'dzi', 'Duzib235G0289' => 'dzi', 'Duzib251G0422' => 'dzi', 'ECA232G3898' => 'eca', 'ECA233G5950' => 'eca', 'ECA234G1699' => 'eca', 'ECA234G2421' => 'eca', 'ECA236G0426' => 'eca', 'ECA236G4331' => 'eca', 'ECA248G2573' => 'eca', 'EL10Ac1g00077' => 'bvu', 'EL10Ac1g01746' => 'bvu', 'EL10Ac2g03464' => 'bvu', 'EL10Ac4g08176' => 'bvu', 'EL10Ac7g17521' => 'bvu', 'EL10Ac8g20386' => 'bvu', 'EL10Ac9g21343' => 'bvu', 'EL10Ac9g22688' => 'bvu', 'Eucgr.B03434' => 'egr', 'Eucgr.D00618' => 'egr', 'Eucgr.E02395' => 'egr', 'Eucgr.F01129' => 'egr', 'Eucgr.F02622' => 'egr', 'Eucgr.F04207' => 'egr', 'FAN01G0570' => 'fan', 'FAN03G3351' => 'fan', 'FAN06G3702' => 'fan', 'FAN07G2149' => 'fan', 'FAN10G3758' => 'fan', 'FAN11G1170' => 'fan', 'FAN11G2050' => 'fan', 'FAN11G2724' => 'fan', 'FAN12G1700' => 'fan', 'FAN12G2028' => 'fan', 'FAN15G1160' => 'fan', 'FAN15G3063' => 'fan', 'FAN16G2540' => 'fan', 'FAN16G3077' => 'fan', 'FAN16G3624' => 'fan', 'FAN17G0221' => 'fan', 'FAN20G2492' => 'fan', 'FAN20G2905' => 'fan', 'FAN21G0548' => 'fan', 'FAN21G1300' => 'fan', 'FAN22G0077' => 'fan', 'FAN22G1315' => 'fan', 'FAN24G1280' => 'fan', 'FAN24G1445' => 'fan', 'FAN24G3527' => 'fan', 'FAN25G0464' => 'fan', 'FAN25G2885' => 'fan', 'FAN25G3270' => 'fan', 'FAN27G1101' => 'fan', 'FAN27G2846' => 'fan', 'FAN27G3524' => 'fan', 'FvH4_2g11770' => 'fve', 'FvH4_2g15630' => 'fve', 'FvH4_3g05570' => 'fve', 'FvH4_3g09110' => 'fve', 'FvH4_3g19940' => 'fve', 'FvH4_4g04821' => 'fve', 'FvH4_4g31480' => 'fve', 'FvH4_7g01740' => 'fve', 'Glyma.05G130400' => 'gma', 'Glyma.05G156400' => 'gma', 'Glyma.07G197000' => 'gma', 'Glyma.08G085151' => 'gma', 'Glyma.08G114500' => 'gma', 'Glyma.08G300400' => 'gma', 'Glyma.10G215800' => 'gma', 'Glyma.12G224400' => 'gma', 'Glyma.13G179300' => 'gma', 'Glyma.13G218151' => 'gma', 'Glyma.13G238800' => 'gma', 'Glyma.13G276900' => 'gma', 'Glyma.14G078200' => 'gma', 'Glyma.15G074500' => 'gma', 'Glyma.15G094100' => 'gma', 'Glyma.17G247200' => 'gma', 'Glyma.18G120100' => 'gma', 'Glyma.20G176000' => 'gma', 'Gohir.A01G063600' => 'ghi', 'Gohir.A01G170301' => 'ghi', 'Gohir.A02G060500' => 'ghi', 'Gohir.A05G133850' => 'ghi', 'Gohir.A05G161400' => 'ghi', 'Gohir.A06G012900' => 'ghi', 'Gohir.A06G035901' => 'ghi', 'Gohir.A06G127100' => 'ghi', 'Gohir.A06G210500' => 'ghi', 'Gohir.A08G008650' => 'ghi', 'Gohir.A09G072700' => 'ghi', 'Gohir.A09G088301' => 'ghi', 'Gohir.A10G040600' => 'ghi', 'Gohir.A12G036300' => 'ghi', 'Gohir.A12G143350' => 'ghi', 'Gohir.A12G165500' => 'ghi', 'Gohir.A13G145700' => 'ghi', 'Gohir.D01G050000' => 'ghi', 'Gohir.D01G051366' => 'ghi', 'Gohir.D01G161350' => 'ghi', 'Gohir.D02G065900' => 'ghi', 'Gohir.D05G164200' => 'ghi', 'Gohir.D05G355500' => 'ghi', 'Gohir.D06G010400' => 'ghi', 'Gohir.D06G111250' => 'ghi', 'Gohir.D06G132000' => 'ghi', 'Gohir.D06G210500' => 'ghi', 'Gohir.D07G165675' => 'ghi', 'Gohir.D08G062240' => 'ghi', 'Gohir.D08G086101' => 'ghi', 'Gohir.D08G138060' => 'ghi', 'Gohir.D09G072300' => 'ghi', 'Gohir.D10G041400' => 'ghi', 'Gohir.D11G191020' => 'ghi', 'Gohir.D11G212066' => 'ghi', 'Gohir.D12G036300' => 'ghi', 'Gohir.D12G168600' => 'ghi', 'Gohir.D13G150600' => 'ghi', 'Gorai.001G057300' => 'gra', 'Gorai.002G069900' => 'gra', 'Gorai.002G200000' => 'gra', 'Gorai.003G067600' => 'gra', 'Gorai.005G074800' => 'gra', 'Gorai.006G087300' => 'gra', 'Gorai.008G037500' => 'gra', 'Gorai.008G181400' => 'gra', 'Gorai.009G169400' => 'gra', 'Gorai.009G387900' => 'gra', 'Gorai.010G013300' => 'gra', 'Gorai.010G153800' => 'gra', 'Gorai.010G255800' => 'gra', 'Gorai.011G043700' => 'gra', 'Gorai.011G198900' => 'gra', 'Gorai.013G168400' => 'gra', 'GSVIVG01005212001' => 'vvi', 'GSVIVG01006163001' => 'vvi', 'GSVIVG01009625001' => 'vvi', 'GSVIVG01014338001' => 'vvi', 'GSVIVG01020005001' => 'vvi', 'GSVIVG01021450001' => 'vvi', 'GSVIVG01023975001' => 'vvi', 'GSVIVG01034490001' => 'vvi', 'HanXRQChr04g0112071' => 'han', 'HanXRQChr05g0131151' => 'han', 'HanXRQChr09g0262371' => 'han', 'HanXRQChr09g0268401' => 'han', 'HanXRQChr10g0279241' => 'han', 'HanXRQChr10g0297961' => 'han', 'HanXRQChr11g0326231' => 'han', 'HanXRQChr11g0328471' => 'han', 'HanXRQChr16g0507941' => 'han', 'HanXRQChr17g0560211' => 'han', 'Haze_02108' => 'cav', 'Haze_02428' => 'cav', 'Haze_05593' => 'cav', 'Haze_06448' => 'cav', 'Haze_09427' => 'cav', 'Haze_12022' => 'cav', 'Haze_17612' => 'cav', 'Haze_17928' => 'cav', 'Hma1.2p1_0032F.1_g019250' => 'hma', 'Hma1.2p1_0163F.1_g072690' => 'hma', 'Hma1.2p1_0265F.1_g106710' => 'hma', 'Hma1.2p1_0286F.1_g113970' => 'hma', 'Hma1.2p1_0363F.1_g136640' => 'hma', 'Hma1.2p1_0584F.1_g183470' => 'hma', 'Hma1.2p1_0885F.1_g232570' => 'hma', 'HPP92_006022' => 'vpl', 'HPP92_007320' => 'vpl', 'HPP92_011521' => 'vpl', 'HPP92_019387' => 'vpl', 'HPP92_024038' => 'vpl', 'Hund05891' => 'sun', 'Hund06450' => 'sun', 'Hund12053' => 'sun', 'Hund16800' => 'sun', 'Hund21222' => 'sun', 'Hund22896' => 'sun', 'Hund23746' => 'sun', 'Hund27083' => 'sun', 'Lalb_Chr02g0141831' => 'lal', 'Lalb_Chr02g0141841' => 'lal', 'Lalb_Chr05g0220411' => 'lal', 'Lalb_Chr06g0162081' => 'lal', 'Lalb_Chr09g0327651' => 'lal', 'Lalb_Chr13g0295051' => 'lal', 'Lalb_Chr15g0086801' => 'lal', 'Lalb_Chr16g0383781' => 'lal', 'Lalb_Chr16g0383791' => 'lal', 'Lalb_Chr18g0055441' => 'lal', 'Lalb_Chr18g0059611' => 'lal', 'Lalb_Chr20g0109661' => 'lal', 'Lalb_Chr20g0109831' => 'lal', 'Lalb_Chr20g0121871' => 'lal', 'Lalb_Chr22g0355361' => 'lal', 'Lalb_Chr25g0286371' => 'lal', 'Lj1A1187G43' => 'lonja', 'Lj1A1205T50' => 'lonja', 'Lj1A800G33' => 'lonja', 'Lj1C1187T7' => 'lonja', 'Lj1C843T11' => 'lonja', 'Lj1g0010940' => 'lja', 'Lj2A288T69' => 'lonja', 'Lj3g0024276' => 'lja', 'Lj4A47T76' => 'lonja', 'Lj4g0005805' => 'lja', 'Lj4g0006097' => 'lja', 'Lj4g0008528' => 'lja', 'Lj4g0024907' => 'lja', 'Lj5g0012472' => 'lja', 'Lj5g0018648' => 'lja', 'Lj6C789G1' => 'lonja', 'Lj6g0004000' => 'lja', 'Lj7A292G67' => 'lonja', 'Lj7A292T64' => 'lonja', 'Lj9A400T58' => 'lonja', 'Lsat_1_v5_gn_1_126181' => 'lsa', 'Lsat_1_v5_gn_4_123041' => 'lsa', 'Lsat_1_v5_gn_4_133620' => 'lsa', 'Lsat_1_v5_gn_4_53221' => 'lsa', 'Lsat_1_v5_gn_4_71961' => 'lsa', 'Lsat_1_v5_gn_7_105241' => 'lsa', 'Lsat_1_v5_gn_7_21361' => 'lsa', 'Lsat_1_v5_gn_7_28860' => 'lsa', 'Lsat_1_v5_gn_7_31260' => 'lsa', 'Lsat_1_v5_gn_8_52801' => 'lsa', 'Manes.02G191400' => 'mes', 'Manes.03G110100' => 'mes', 'Manes.04G071100' => 'mes', 'Manes.05G100500' => 'mes', 'Manes.05G164700' => 'mes', 'Manes.15G087000' => 'mes', 'Manes.15G121500' => 'mes', 'Manes.16G028300' => 'mes', 'Manes.17G046100' => 'mes', 'Manes.17G069800' => 'mes', 'Manes.18G100500' => 'mes', 'Mapoly0002s0109' => 'mpo', 'Mapoly0024s0007' => 'mpo', 'Mapoly0089s0032' => 'mpo', 'MBI04_g42241_MAGBIO' => 'mbi', 'MBI05_g11988_MAGBIO' => 'mbi', 'MBI05_g35452_MAGBIO' => 'mbi', 'MBI07_g30179_MAGBIO' => 'mbi', 'MBI07_g35859_MAGBIO' => 'mbi', 'MBI07_g35860_MAGBIO' => 'mbi', 'MBI07_g37166_MAGBIO' => 'mbi', 'MBI08_g18172_MAGBIO' => 'mbi', 'MBI09_g08441_MAGBIO' => 'mbi', 'MBI13_g01676_MAGBIO' => 'mbi', 'MBI14_g42955_MAGBIO' => 'mbi', 'MBI16_g13161_MAGBIO' => 'mbi', 'MBI17_g27204_MAGBIO' => 'mbi', 'MBI19_g21595_MAGBIO' => 'mbi', 'MD00G1148400' => 'mdo', 'MD02G1301200' => 'mdo', 'MD03G1227800' => 'mdo', 'MD05G1041100' => 'mdo', 'MD05G1124800' => 'mdo', 'MD05G1284000' => 'mdo', 'MD05G1338800' => 'mdo', 'MD05G1338900' => 'mdo', 'MD07G1022800' => 'mdo', 'MD10G1047500' => 'mdo', 'MD10G1127500' => 'mdo', 'MD10G1262300' => 'mdo', 'MD10G1293800' => 'mdo', 'MD16G1074300' => 'mdo', 'Medtr1g021670' => 'mtr', 'Medtr1g096320' => 'mtr', 'Medtr2g013690' => 'mtr', 'Medtr2g019450' => 'mtr', 'Medtr2g085170' => 'mtr', 'Medtr4g088785' => 'mtr', 'Medtr8g055930' => 'mtr', 'Medtr8g085850' => 'mtr', 'MELO3C002605.2' => 'cme', 'MELO3C003891.2' => 'cme', 'MELO3C004012.2' => 'cme', 'MELO3C007134.2' => 'cme', 'MELO3C008118.2' => 'cme', 'MELO3C016700.2' => 'cme', 'MELO3C024127.2' => 'cme', 'MELO3C033361.2' => 'cme', 'MELO3C033362.2' => 'cme', 'Migut.C00430' => 'egut', 'Migut.C01246' => 'egut', 'Migut.E00101' => 'egut', 'Migut.H01486' => 'egut', 'Migut.H01939' => 'egut', 'Migut.K00360' => 'egut', 'Migut.M00910' => 'egut', 'Migut.M01139' => 'egut', 'Migut.N02677' => 'egut', 'MSTRG.13252' => 'ama', 'MSTRG.14701' => 'ama', 'MSTRG.1521' => 'ama', 'MSTRG.15884' => 'ama', 'MSTRG.16242' => 'ama', 'MSTRG.22285' => 'ama', 'MSTRG.22444' => 'ama', 'MSTRG.2349' => 'ama', 'MSTRG.26308' => 'ama', 'MSTRG.28296' => 'ama', 'MSTRG.9895' => 'ama', 'Nitab4.5_0000110g0060' => 'nta', 'Nitab4.5_0000420g0130' => 'nta', 'Nitab4.5_0000422g0030' => 'nta', 'Nitab4.5_0000560g0180' => 'nta', 'Nitab4.5_0000703g0100' => 'nta', 'Nitab4.5_0000786g0200' => 'nta', 'Nitab4.5_0001336g0020' => 'nta', 'Nitab4.5_0001796g0030' => 'nta', 'Nitab4.5_0003348g0060' => 'nta', 'Nitab4.5_0003698g0040' => 'nta', 'Nitab4.5_0003942g0090' => 'nta', 'Nitab4.5_0004775g0070' => 'nta', 'Nitab4.5_0004864g0030' => 'nta', 'Nitab4.5_0005615g0020' => 'nta', 'Nitab4.5_0009288g0030' => 'nta', 'Nitab4.5_0009341g0010' => 'nta', 'Nitab4.5_0009535g0010' => 'nta', 'Nn1g03995' => 'nnu', 'Nn1g04100' => 'nnu', 'Nn1g06530' => 'nnu', 'Nn3g16404' => 'nnu', 'Nn3g17212' => 'nnu', 'Nn3g20776' => 'nnu', 'Nn3g21923' => 'nnu', 'Nn5g27737' => 'nnu', 'Nn5g29461' => 'nnu', 'Nn7g38355' => 'nnu', 'Nn8g39873' => 'nnu', 'Oeu000548.2' => 'oeu', 'Oeu004672.1' => 'oeu', 'Oeu015605.2' => 'oeu', 'Oeu016092.1' => 'oeu', 'Oeu017879.3' => 'oeu', 'Oeu024910.1' => 'oeu', 'Oeu028965.1' => 'oeu', 'Oeu031269.1' => 'oeu', 'Oeu031270.1' => 'oeu', 'Oeu032535.1' => 'oeu', 'Oeu034151.1' => 'oeu', 'Oeu034152.1' => 'oeu', 'Oeu034588.2' => 'oeu', 'Oeu050846.1' => 'oeu', 'Oeu050849.2' => 'oeu', 'Oeu051063.2' => 'oeu', 'Oeu052368.1' => 'oeu', 'Oeu052370.1' => 'oeu', 'Os01g0210400' => 'osa', 'Os01g0304300' => 'osa', 'Os01g0749100' => 'osa', 'Os02g0745800' => 'osa', 'Os03g0769050' => 'osa', 'Os05g0531500' => 'osa', 'Os06g0724300' => 'osa', 'Os11g0198100' => 'osa', 'Peaxi162Scf00069g01425' => 'pax', 'Peaxi162Scf00280g00811' => 'pax', 'Peaxi162Scf00310g00615' => 'pax', 'Peaxi162Scf00362g00542' => 'pax', 'Peaxi162Scf00461g00310' => 'pax', 'Peaxi162Scf00530g00118' => 'pax', 'Peaxi162Scf00541g00057' => 'pax', 'Peaxi162Scf00661g00017' => 'pax', 'Peaxi162Scf00926g00027' => 'pax', 'Peaxi162Scf01064g00263' => 'pax', 'Peaxi162Scf01211g00135' => 'pax', 'PGR004G2336' => 'pgr', 'PGR042G0327' => 'pgr', 'PGR042G1957' => 'pgr', 'PGR042G2003' => 'pgr', 'PGR042G3929' => 'pgr', 'PGR083G1137' => 'pgr', 'PGR083G1364' => 'pgr', 'PGSC0003DMG400003381' => 'stu', 'PGSC0003DMG400003417' => 'stu', 'PGSC0003DMG400008981' => 'stu', 'PGSC0003DMG400012417' => 'stu', 'PGSC0003DMG400012823' => 'stu', 'PGSC0003DMG400016885' => 'stu', 'PGSC0003DMG400022812' => 'stu', 'PGSC0003DMG400029726' => 'stu', 'PGSC0003DMG401009243' => 'stu', 'PGSC0003DMG401031505' => 'stu', 'PGSC0003DMG402031505' => 'stu', 'Phvul.001G017600' => 'pvu', 'Phvul.002G193500' => 'pvu', 'Phvul.002G228900' => 'pvu', 'Phvul.002G236800' => 'pvu', 'Phvul.003G049500' => 'pvu', 'Phvul.005G072000' => 'pvu', 'Phvul.006G164800' => 'pvu', 'Phvul.006G185100' => 'pvu', 'Phvul.007G090000' => 'pvu', 'Potri.001G399800' => 'ptr', 'Potri.002G149900' => 'ptr', 'Potri.004G044100' => 'ptr', 'Potri.004G177600' => 'ptr', 'Potri.009G138000' => 'ptr', 'Potri.010G094000' => 'ptr', 'Potri.011G053000' => 'ptr', 'Potri.011G119300' => 'ptr', 'Potri.013G113700' => 'ptr', 'Potri.018G107800' => 'ptr', 'Potri.019G084100' => 'ptr', 'Pp3c14_23720' => 'ppa', 'Pp3c16_6340' => 'ppa', 'Pp3c23_13420' => 'ppa', 'Pp3c24_2740' => 'ppa', 'Pp3c25_860' => 'ppa', 'Pp3c8_21750' => 'ppa', 'Prupe.1G273000' => 'ppe', 'Prupe.1G273700' => 'ppe', 'Prupe.1G274100' => 'ppe', 'Prupe.2G023300' => 'ppe', 'Prupe.4G048000' => 'ppe', 'Prupe.4G080400' => 'ppe', 'Prupe.4G181200' => 'ppe', 'Prupe.8G056900' => 'ppe', 'Prupe.8G168700' => 'ppe', 'Psat1g189080' => 'psa', 'Psat1g204760' => 'psa', 'Psat4g175560' => 'psa', 'Psat4g177720' => 'psa', 'Psat5g244240' => 'psa', 'Psat6g010720' => 'psa', 'Psat6g187200' => 'psa', 'Psat7g072040' => 'psa', 'PSO017G3501' => 'pso', 'PSO063G2148' => 'pso', 'PSO063G5608' => 'pso', 'PSO210G6392' => 'pso', 'PSO541G2319' => 'pso', 'PSO541G2836' => 'pso', 'PSO541G4012' => 'pso', 'PSO541G6253' => 'pso', 'PSO675G0580' => 'pso', 'PSO675G0856' => 'pso', 'PSO675G5635' => 'pso', 'PSO675G9157' => 'pso', 'PSO832G1660' => 'pso', 'PSO832G1969' => 'pso', 'QL02p007186' => 'qlo', 'QL02p033904' => 'qlo', 'QL03p064391' => 'qlo', 'QL05p040593' => 'qlo', 'QL05p058242' => 'qlo', 'QL08p021825' => 'qlo', 'QL11p004981' => 'qlo', 'RcHm_v2.0_Chr1g0318301' => 'rch', 'RcHm_v2.0_Chr4g0418501' => 'rch', 'RcHm_v2.0_Chr4g0439971' => 'rch', 'RcHm_v2.0_Chr5g0008541' => 'rch', 'RcHm_v2.0_Chr5g0014101' => 'rch', 'RcHm_v2.0_Chr5g0014131' => 'rch', 'RcHm_v2.0_Chr5g0033621' => 'rch', 'RcHm_v2.0_Chr6g0272041' => 'rch', 'RcHm_v2.0_Chr6g0278831' => 'rch', 'Rhsim02G0130400' => 'rsi', 'Rhsim02G0171100' => 'rsi', 'Rhsim05G0053000' => 'rsi', 'Rhsim05G0053100' => 'rsi', 'Rhsim06G0096500' => 'rsi', 'Rhsim06G0096600' => 'rsi', 'Rhsim06G0199100' => 'rsi', 'Rhsim12G0062300' => 'rsi', 'Rhsim12G0062800' => 'rsi', 'Sabra02G0118600' => 'sbr', 'Sabra04G0027300' => 'sbr', 'Sabra04G0119500' => 'sbr', 'Sabra08G0112500' => 'sbr', 'Sabra11G0036800' => 'sbr', 'Sabra11G0103800' => 'sbr', 'Sabra13G0096300' => 'sbr', 'Sabra16G0262300' => 'sbr', 'Sabra18G0091700' => 'sbr', 'Sabra19G0095400' => 'sbr', 'SalBow6G3080' => 'sbo', 'SalBow7G1157' => 'sbo', 'SalBow7G2123' => 'sbo', 'SalBow7G2285' => 'sbo', 'SalBow7G3537' => 'sbo', 'SalBow8G2947' => 'sbo', 'SalBow8G4463' => 'sbo', 'SalBow8G5466' => 'sbo', 'Sc01g0001750' => 'sci', 'Sc02g0006640' => 'sci', 'Sc02g0006670' => 'sci', 'Sc04g0008220' => 'sci', 'Sc05g0006190' => 'sci', 'Sc08g0002760' => 'sci', 'Sc17g0006170' => 'sci', 'Sc22g0002050' => 'sci', 'Sc23g0001190' => 'sci', 'Sc24g0000980' => 'sci', 'Sed0006245' => 'sed', 'Sed0007543' => 'sed', 'Sed0009411' => 'sed', 'Sed0010765' => 'sed', 'Sed0012944' => 'sed', 'Sed0014682' => 'sed', 'Sed0016174' => 'sed', 'Sed0016796' => 'sed', 'Sed0020317' => 'sed', 'Sed0021467' => 'sed', 'SEGI_01316' => 'sgi', 'SEGI_03374' => 'sgi', 'SEGI_16265' => 'sgi', 'SEGI_18569' => 'sgi', 'SEGI_20351' => 'sgi', 'SEGI_26395' => 'sgi', 'SEGI_29469' => 'sgi', 'SEGI_34771' => 'sgi', 'SEGI_36769' => 'sgi', 'SEGI_37139' => 'sgi', 'SGA_v2.0_scaffold100G29687' => 'sas', 'SGA_v2.0_scaffold118G32472' => 'sas', 'SGA_v2.0_scaffold14G07051' => 'sas', 'SGA_v2.0_scaffold183G39845' => 'sas', 'SGA_v2.0_scaffold1G00174' => 'sas', 'SGA_v2.0_scaffold22G09714' => 'sas', 'SGA_v2.0_scaffold333G48992' => 'sas', 'SGA_v2.0_scaffold46G17491' => 'sas', 'SGA_v2.0_scaffold49G18294' => 'sas', 'SGA_v2.0_scaffold63G21658' => 'sas', 'SHI01741' => 'shi', 'SHI05771' => 'shi', 'SHI18077' => 'shi', 'SHI20525' => 'shi', 'SHI20527' => 'shi', 'SHI20528' => 'shi', 'SMO172G0185' => 'smo', 'SMO198G0020' => 'smo', 'SMO351G0006' => 'smo', 'SMO356G0118' => 'smo', 'SMO358G0296' => 'smo', 'SMO367G0079' => 'smo', 'SMO367G1277' => 'smo', 'Solyc01g014220.3' => 'sly', 'Solyc01g111770.2' => 'sly', 'Solyc02g078180.3' => 'sly', 'Solyc03g006430.3' => 'sly', 'Solyc03g006456.1' => 'sly', 'Solyc03g079860.2' => 'sly', 'Solyc04g079770.3' => 'sly', 'Solyc05g007430.4' => 'sly', 'Solyc07g063150.3' => 'sly', 'Solyc08g016620.3' => 'sly', 'Solyc09g057590.3' => 'sly', 'Solyc09g057600.1' => 'sly', 'Solyc10g009050.3' => 'sly', 'Solyc11g017420.2' => 'sly', 'Sopen01g053810' => 'spe', 'Sopen02g023040' => 'spe', 'Sopen03g002440' => 'spe', 'Sopen04g033350' => 'spe', 'Sopen05g003310' => 'spe', 'Sopen07g004050' => 'spe', 'Sopen07g031340' => 'spe', 'Sopen08g006990' => 'spe', 'Sopen10g004830' => 'spe', 'Sopen11g009370' => 'spe', 'Sp1g24450' => 'spa', 'Sp1g29670' => 'spa', 'Sp1g39600' => 'spa', 'Sp2g11080' => 'spa', 'Sp2g13970' => 'spa', 'Sp4g16130' => 'spa', 'Sp6g13080' => 'spa', 'Sp7g37270' => 'spa', 'TAR371G0065' => 'tar', 'TAR376G0340' => 'tar', 'TAR376G0435' => 'tar', 'TAR381G0002' => 'tar', 'TAR381G1236' => 'tar', 'TAR624G0055' => 'tar', 'TAR624G0324' => 'tar', 'TAR624G0696' => 'tar', 'TAR624G0906' => 'tar', 'TAR625G0107' => 'tar', 'TAR626G0015' => 'tar', 'TAR626G1356' => 'tar', 'TAR627G0888' => 'tar', 'TAR628G0399' => 'tar', 'TAR628G1327' => 'tar', 'TAR629G2831' => 'tar', 'TAR629G2874' => 'tar', 'TAR633G1432' => 'tar', 'TAR633G2771' => 'tar', 'THA.LOC104803394' => 'tha', 'THA.LOC104805153' => 'tha', 'THA.LOC104806784' => 'tha', 'THA.LOC104810473' => 'tha', 'THA.LOC104813100' => 'tha', 'THA.LOC104814215' => 'tha', 'THA.LOC104815554' => 'tha', 'THA.LOC104820544' => 'tha', 'THA.LOC104824754' => 'tha', 'THA.LOC104827717' => 'tha', 'Thecc.02G031400' => 'tca', 'Thecc.02G055900' => 'tca', 'Thecc.02G350800' => 'tca', 'Thecc.06G150900' => 'tca', 'Thecc.06G186600' => 'tca', 'Thecc.07G089600' => 'tca', 'Thecc.08G020400' => 'tca', 'Thecc.08G182100' => 'tca', 'Thhalv10000873m.g' => 'esa', 'Thhalv10004185m.g' => 'esa', 'Thhalv10006981m.g' => 'esa', 'Thhalv10007204m.g' => 'esa', 'Thhalv10011374m.g' => 'esa', 'Thhalv10013482m.g' => 'esa', 'Thhalv10017801m.g' => 'esa', 'Thhalv10024983m.g' => 'esa', 'TPR.G12072' => 'tpr', 'TPR.G15769' => 'tpr', 'TPR.G16504' => 'tpr', 'TPR.G16506' => 'tpr', 'TPR.G24345' => 'tpr', 'TPR.G26666' => 'tpr', 'TPR.G27320' => 'tpr', 'TPR.G31819' => 'tpr', 'TPR.G38879' => 'tpr', 'TPR.G39015' => 'tpr', 'TPR.G8819' => 'tpr', 'TWI09G0924' => 'twi', 'TWI12G0811' => 'twi', 'TWI12G1294' => 'twi', 'TWI31G0150' => 'twi', 'TWI36G1262' => 'twi', 'TWI38G1287' => 'twi', 'TWI38G1633' => 'twi', 'TWI38G1982' => 'twi', 'TWI39G0116' => 'twi', 'TWI60G1011' => 'twi', 'TWI63G0171' => 'twi', 'TWI73G0839' => 'twi', 'TWI79G1511' => 'twi', 'unitig_0.g915' => 'ugi', 'unitig_0.g916' => 'ugi', 'unitig_21.g20219' => 'ugi', 'unitig_21.g20416' => 'ugi', 'unitig_578.g16132' => 'ugi', 'unitig_578.g16718' => 'ugi', 'unitig_62.g23481' => 'ugi', 'unitig_744.g24535' => 'ugi', 'unitig_749.g13525' => 'ugi', 'vmacro01248' => 'vma', 'vmacro02290' => 'vma', 'vmacro10946' => 'vma', 'vmacro11865' => 'vma', 'vmacro12493' => 'vma', 'vmacro17322' => 'vma', 'vmacro21599' => 'vma', 'vmacro23041' => 'vma', 'VMungo0251G0004' => 'vmu', 'VMungo0251G2639' => 'vmu', 'VMungo0251G2967' => 'vmu', 'VMungo0540G0864' => 'vmu', 'VMungo0540G1569' => 'vmu', 'VMungo0647G0317' => 'vmu', 'VMungo0720G1373' => 'vmu', 'VMungo0720G1508' => 'vmu', 'VMungo1080G0485' => 'vmu', 'VMungo1215G3177' => 'vmu', 'Zm00001eb112600' => 'zma', 'Zm00001eb120220' => 'zma', 'Zm00001eb153240' => 'zma', 'Zm00001eb168880' => 'zma', 'Zm00001eb213920' => 'zma', 'Zm00001eb228280' => 'zma', 'Zm00001eb254580' => 'zma', 'Zm00001eb272180' => 'zma', 'Zm00001eb293190' => 'zma', 'Zm00001eb322930' => 'zma', 'Zm00001eb353360' => 'zma', 'Zm00001eb353390' => 'zma', 'Zm00001eb353430' => 'zma', 'Zm00001eb353440' => 'zma', 'Zm00001eb353780' => 'zma' ) $gf_id = 'HOM05D000499' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000499' ) $data_identifier = 'HOM05D000499' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 29, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 12, 'amhyb' => (int) 8, 'aly' => (int) 12, 'aox' => (int) 9, 'arhy' => (int) 26, 'ath' => (int) 8, 'atr' => (int) 7, 'acertr' => (int) 10, 'cqu' => (int) 15, 'bca' => (int) 29, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 11, 'cansat' => (int) 8, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 9, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 8, 'cpa' => (int) 10, 'csa' => (int) 7, 'camsi' => (int) 20, 'dca' => (int) 8, 'din' => (int) 12, 'dzi' => (int) 14, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 6, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 38, 'gra' => (int) 16, 'vvi' => (int) 8, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 5, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 11, 'lja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 11, 'mpo' => (int) 3, 'mbi' => (int) 14, 'mdo' => (int) 14, 'mtr' => (int) 8, 'cme' => (int) 9, 'egut' => (int) 9, 'ama' => (int) 11, 'nta' => (int) 17, 'nnu' => (int) 11, 'oeu' => (int) 18, 'osa' => (int) 8, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 6, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 9, 'rsi' => (int) 9, 'sbr' => (int) 10, 'sbo' => (int) 8, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 10, 'sas' => (int) 10, 'shi' => (int) 6, 'smo' => (int) 7, 'sly' => (int) 14, 'spe' => (int) 10, 'spa' => (int) 8, 'tar' => (int) 19, 'tha' => (int) 10, 'tca' => (int) 8, 'esa' => (int) 8, 'tpr' => (int) 11, 'twi' => (int) 13, 'ugi' => (int) 9, 'vma' => (int) 8, 'vmu' => (int) 10, 'zma' => (int) 15 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb353780' $species_info = array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ) $local_species = 'nta' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000499', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1066', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p29780' => 'bna', 'A02p33180' => 'bna', 'A03p16470' => 'bna', 'A03p66010' => 'bna', 'A04p25970' => 'bna', 'A06p01270' => 'bna', 'A06p46080' => 'bna', 'A07p11400' => 'bna', 'A08p01840' => 'bna', 'A08p08230' => 'bna', 'A08p25740' => 'bna', 'A09p32070' => 'bna', 'A09p37830' => 'bna', 'A09p42840' => 'bna', 'A09p42850' => 'bna', 'Aa31LG10G2060' => 'aar', 'Aa31LG2G7410' => 'aar', 'Aa31LG6G10200' => 'aar', 'Aa31LG6G16680' => 'aar', 'Aa31LG6G8470' => 'aar', 'Aa31LG9G12730' => 'aar', 'Aa31LG9G13680' => 'aar', 'Aa31LG9G14920' => 'aar', 'Aa31LG9G6650' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4977' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5467' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3254' => 'aag', 'Actinidia02578' => 'ach', 'Actinidia07693' => 'ach', 'Actinidia08413' => 'ach', 'Actinidia08414' => 'ach', 'Actinidia15289' => 'ach', 'Actinidia19871' => 'ach', 'Actinidia21475' => 'ach', 'Actinidia22576' => 'ach', 'Actinidia28327' => 'ach', 'Actinidia32491' => 'ach', 'Actinidia39463' => 'ach', 'Actinidia39571' => 'ach', 'Ah.01g013750' => 'amhyb', 'Ah.01g023210' => 'amhyb', 'Ah.04g164850' => 'amhyb', 'Ah.05g178060' => 'amhyb', 'Ah.07g204270' => 'amhyb', 'Ah.07g208480' => 'amhyb', 'Ah.09g237410' => 'amhyb', 'Ah.14g089460' => 'amhyb', 'AL1G41790' => 'aly', 'AL1G49050' => 'aly', 'AL1G53810' => 'aly', 'AL1G61400' => 'aly', 'AL4G18580' => 'aly', 'AL5G12510' => 'aly', 'AL5G12540' => 'aly', 'AL6G43230' => 'aly', 'AL7G10370' => 'aly', 'AL7G19250' => 'aly', 'AL8G12240' => 'aly', 'AL8G18540' => 'aly', 'Aqoxy1G02409' => 'aox', 'Aqoxy2G03993' => 'aox', 'Aqoxy3G03357' => 'aox', 'Aqoxy4G00785' => 'aox', 'Aqoxy5G02598' => 'aox', 'Aqoxy6G00132' => 'aox', 'Aqoxy7G01776' => 'aox', 'Aqoxy7G02316' => 'aox', 'Aqoxy7G03973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.12AFKW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B8730' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27IQR1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3F75VG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3RE0GA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41TCQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.527VTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FIR39' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5W8UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DA38EV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ63HS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H1I32C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HC27T5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4M8AP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7N3CZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9UVDZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LS1NQA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT1D4B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SKC4TM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCFV76' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF9Q1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQWD9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1ZM88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WE07RT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YCK7VH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJE6Q6' => 'arhy', 'AT1G28240' => 'ath', 'AT1G34550' => 'ath', 'AT1G53040' => 'ath', 'AT2G02910' => 'ath', 'AT4G09630' => 'ath', 'AT4G38500' => 'ath', 'AT5G42660' => 'ath', 'AT5G46220' => 'ath', 'ATR0152G026' => 'atr', 'ATR0564G343' => 'atr', 'ATR0706G151' => 'atr', 'ATR0733G207' => 'atr', 'ATR0751G234' => 'atr', 'ATR0807G048' => 'atr', 'ATR1091G084' => 'atr', 'Atru.chr10.1229' => 'acertr', 'Atru.chr10.1230' => 'acertr', 'Atru.chr10.1874' => 'acertr', 'Atru.chr11.1808' => 'acertr', 'Atru.chr13.1795' => 'acertr', 'Atru.chr13.570' => 'acertr', 'Atru.chr2.2608' => 'acertr', 'Atru.chr2.2609' => 'acertr', 'Atru.chr5.3428' => 'acertr', 'Atru.chr8.1171' => 'acertr', 'AUR62004651' => 'cqu', 'AUR62008675' => 'cqu', 'AUR62010014' => 'cqu', 'AUR62013004' => 'cqu', 'AUR62014825' => 'cqu', 'AUR62015015' => 'cqu', 'AUR62015151' => 'cqu', 'AUR62017020' => 'cqu', 'AUR62019422' => 'cqu', 'AUR62023570' => 'cqu', 'AUR62025571' => 'cqu', 'AUR62029098' => 'cqu', 'AUR62033863' => 'cqu', 'AUR62034296' => 'cqu', 'AUR62040075' => 'cqu', 'BcaB02g07334' => 'bca', 'BcaB02g10575' => 'bca', 'BcaB03g12119' => 'bca', 'BcaB03g12120' => 'bca', 'BcaB03g13945' => 'bca', 'BcaB04g17123' => 'bca', 'BcaB04g17867' => 'bca', 'BcaB04g19839' => 'bca', 'BcaB07g30317' => 'bca', 'BcaB07g32432' => 'bca', 'BcaB07g33362' => 'bca', 'BcaB08g36611' => 'bca', 'BcaC01g00028' => 'bca', 'BcaC01g01356' => 'bca', 'BcaC01g02034' => 'bca', 'BcaC01g06051' => 'bca', 'BcaC03g16839' => 'bca', 'BcaC03g17176' => 'bca', 'BcaC05g26829' => 'bca', 'BcaC06g31490' => 'bca', 'BcaC06g35344' => 'bca', 'BcaC06g36570' => 'bca', 'BcaC07g37537' => 'bca', 'BcaC08g43491' => 'bca', 'BcaC08g43773' => 'bca', 'BcaNung00234' => 'bca', 'BcaNung01982' => 'bca', 'BcaNung03707' => 'bca', 'BcaNung06454' => 'bca', 'BolC2t10762H' => 'bol', 'BolC2t11191H' => 'bol', 'BolC3t14322H' => 'bol', 'BolC3t19747H' => 'bol', 'BolC3t21425H' => 'bol', 'BolC4t27800H' => 'bol', 'BolC5t31423H' => 'bol', 'BolC6t35951H' => 'bol', 'BolC6t36282H' => 'bol', 'BolC7t40678H' => 'bol', 'BolC7t40679H' => 'bol', 'BolC7t42222H' => 'bol', 'BolC7t43492H' => 'bol', 'BolC7t46785H' => 'bol', 'BolC8t47853H' => 'bol', 'BolC9t56805H' => 'bol', 'BraA02t08000Z' => 'bra', 'BraA02t08341Z' => 'bra', 'BraA03t10936Z' => 'bra', 'BraA03t15657Z' => 'bra', 'BraA04t18100Z' => 'bra', 'BraA05t20523Z' => 'bra', 'BraA06t23353Z' => 'bra', 'BraA06t27473Z' => 'bra', 'BraA06t27769Z' => 'bra', 'BraA07t28928Z' => 'bra', 'BraA08t32236Z' => 'bra', 'BraA08t32841Z' => 'bra', 'BraA08t34524Z' => 'bra', 'BraA09t38742Z' => 'bra', 'BraA09t39295Z' => 'bra', 'C02p47180' => 'bna', 'C02p50990' => 'bna', 'C03p19360' => 'bna', 'C03p74950' => 'bna', 'C03p91000' => 'bna', 'C04p63260' => 'bna', 'C05p27050' => 'bna', 'C06p08750' => 'bna', 'C06p11490' => 'bna', 'C07p02820' => 'bna', 'C07p17180' => 'bna', 'C07p29440' => 'bna', 'C07p63730' => 'bna', 'C09p39260' => 'bna', 'CAN.G1164.34' => 'can', 'CAN.G1164.39' => 'can', 'CAN.G1530.3' => 'can', 'CAN.G162.61' => 'can', 'CAN.G176.6' => 'can', 'CAN.G289.49' => 'can', 'CAN.G370.21' => 'can', 'CAN.G370.22' => 'can', 'CAN.G371.117' => 'can', 'CAN.G58.37' => 'can', 'CAN.G588.98' => 'can', 'CANSAT21G2266' => 'cansat', 'CANSAT25G2799' => 'cansat', 'CANSAT35G0862' => 'cansat', 'CANSAT35G1704' => 'cansat', 'CANSAT35G1760' => 'cansat', 'CANSAT56G3971' => 'cansat', 'CANSAT56G4116' => 'cansat', 'CANSAT80G1259' => 'cansat', 'CARHR027730' => 'chi', 'CARHR033880' => 'chi', 'CARHR043270' => 'chi', 'CARHR145330' => 'chi', 'CARHR145340' => 'chi', 'CARHR175570' => 'chi', 'CARHR181570' => 'chi', 'CARHR258470' => 'chi', 'CARHR260490' => 'chi', 'CARHR294220' => 'chi', 'Carub.0001s2668' => 'cru', 'Carub.0001s3257' => 'cru', 'Carub.0001s4220' => 'cru', 'Carub.0005s0179' => 'cru', 'Carub.0006s2807' => 'cru', 'Carub.0007s0039' => 'cru', 'Carub.0008s0169' => 'cru', 'Carub.0008s0636' => 'cru', 'Ca_00338_v3' => 'car', 'Ca_00542_v3' => 'car', 'Ca_01844_v3' => 'car', 'Ca_10611_v3' => 'car', 'Ca_13326_v3' => 'car', 'Ca_17944_v3' => 'car', 'Ca_18546_v3' => 'car', 'Ca_24219_v3' => 'car', 'Ca_29972_v3' => 'car', 'CBR_g3681' => 'cbr', 'CBR_g40021' => 'cbr', 'Cc01_g08140' => 'ccan', 'Cc02_g13410' => 'ccan', 'Cc02_g37480' => 'ccan', 'Cc05_g12030' => 'ccan', 'Cc09_g03370' => 'ccan', 'Cc09_g10300' => 'ccan', 'Cc10_g03530' => 'ccan', 'Cc10_g11380' => 'ccan', 'CDE01G0176' => 'cde', 'CDE02G0675' => 'cde', 'CDE02G0942' => 'cde', 'CDE02G1153' => 'cde', 'CDE02G4177' => 'cde', 'CDE04G2117' => 'cde', 'CDE04G2736' => 'cde', 'CDE08G1161' => 'cde', 'CDE09G1238' => 'cde', 'Cfa000467' => 'cfa', 'Cfa000947' => 'cfa', 'Cfa004969' => 'cfa', 'Cfa005284' => 'cfa', 'Cfa008993' => 'cfa', 'Cfa018187' => 'cfa', 'Cfa018454' => 'cfa', 'Cfa020585' => 'cfa', 'Ciclev10000424m.g' => 'ccl', 'Ciclev10003605m.g' => 'ccl', 'Ciclev10007828m.g' => 'ccl', 'Ciclev10014620m.g' => 'ccl', 'Ciclev10015169m.g' => 'ccl', 'Ciclev10018291m.g' => 'ccl', 'Ciclev10028256m.g' => 'ccl', 'Ciclev10033822m.g' => 'ccl', 'CiPaw.05G060300' => 'cil', 'CiPaw.05G085000' => 'cil', 'CiPaw.06G083700' => 'cil', 'CiPaw.06G120300' => 'cil', 'CiPaw.09G060500' => 'cil', 'CiPaw.09G123800' => 'cil', 'CiPaw.11G169700' => 'cil', 'CiPaw.12G118300' => 'cil', 'CiPaw.15G071000' => 'cil', 'CiPaw.15G081900' => 'cil', 'ClCG01G024610' => 'cla', 'ClCG03G006070' => 'cla', 'ClCG05G019250' => 'cla', 'ClCG09G009500' => 'cla', 'ClCG11G008200' => 'cla', 'ClCG11G018080' => 'cla', 'COL.COLO4_17373' => 'col', 'COL.COLO4_22994' => 'col', 'COL.COLO4_26389' => 'col', 'COL.COLO4_27170' => 'col', 'COL.COLO4_31074' => 'col', 'COL.COLO4_31465' => 'col', 'COL.COLO4_36438' => 'col', 'COL.COLO4_36439' => 'col', 'Cpa.g.c38781' => 'cpa', 'Cpa.g.sc128.12' => 'cpa', 'Cpa.g.sc166.7' => 'cpa', 'Cpa.g.sc166.8' => 'cpa', 'Cpa.g.sc20.111' => 'cpa', 'Cpa.g.sc27.31' => 'cpa', 'Cpa.g.sc64.36' => 'cpa', 'Cpa.g.sc64.37' => 'cpa', 'Cpa.g.sc66.49' => 'cpa', 'Cpa.g.sc80.64' => 'cpa', 'CsaV3_1G012320' => 'csa', 'CsaV3_2G008480' => 'csa', 'CsaV3_2G033450' => 'csa', 'CsaV3_3G044830' => 'csa', 'CsaV3_4G033710' => 'csa', 'CsaV3_6G051730' => 'csa', 'CsaV3_7G025350' => 'csa', 'CSS0001067' => 'camsi', 'CSS0005996' => 'camsi', 'CSS0006590' => 'camsi', 'CSS0009673' => 'camsi', 'CSS0010201' => 'camsi', 'CSS0010549' => 'camsi', 'CSS0011364' => 'camsi', 'CSS0014473' => 'camsi', 'CSS0014961' => 'camsi', 'CSS0020191' => 'camsi', 'CSS0021165' => 'camsi', 'CSS0022306' => 'camsi', 'CSS0030591' => 'camsi', 'CSS0030696' => 'camsi', 'CSS0032653' => 'camsi', 'CSS0037487' => 'camsi', 'CSS0041102' => 'camsi', 'CSS0041261' => 'camsi', 'CSS0046246' => 'camsi', 'CSS0049256' => 'camsi', 'DCAR_004075' => 'dca', 'DCAR_011538' => 'dca', 'DCAR_019553' => 'dca', 'DCAR_020952' => 'dca', 'DCAR_021739' => 'dca', 'DCAR_027407' => 'dca', 'DCAR_027913' => 'dca', 'DCAR_028066' => 'dca', 'Dinv05899' => 'din', 'Dinv07563' => 'din', 'Dinv08010' => 'din', 'Dinv14125' => 'din', 'Dinv20172' => 'din', 'Dinv30743' => 'din', 'Dinv31229' => 'din', 'Dinv34162' => 'din', 'Dinv36028' => 'din', 'Dinv39368' => 'din', 'Dinv40565' => 'din', 'Dinv41706' => 'din', 'Duzib052G0089' => 'dzi', 'Duzib116G0641' => 'dzi', 'Duzib132G0069' => 'dzi', 'Duzib132G1219' => 'dzi', 'Duzib147G0278' => 'dzi', 'Duzib160G0480' => 'dzi', 'Duzib170G0661' => 'dzi', 'Duzib177G0591' => 'dzi', 'Duzib187G1353' => 'dzi', 'Duzib192G0858' => 'dzi', 'Duzib192G0883' => 'dzi', 'Duzib213G0506' => 'dzi', 'Duzib235G0289' => 'dzi', 'Duzib251G0422' => 'dzi', 'ECA232G3898' => 'eca', 'ECA233G5950' => 'eca', 'ECA234G1699' => 'eca', 'ECA234G2421' => 'eca', 'ECA236G0426' => 'eca', 'ECA236G4331' => 'eca', 'ECA248G2573' => 'eca', 'EL10Ac1g00077' => 'bvu', 'EL10Ac1g01746' => 'bvu', 'EL10Ac2g03464' => 'bvu', 'EL10Ac4g08176' => 'bvu', 'EL10Ac7g17521' => 'bvu', 'EL10Ac8g20386' => 'bvu', 'EL10Ac9g21343' => 'bvu', 'EL10Ac9g22688' => 'bvu', 'Eucgr.B03434' => 'egr', 'Eucgr.D00618' => 'egr', 'Eucgr.E02395' => 'egr', 'Eucgr.F01129' => 'egr', 'Eucgr.F02622' => 'egr', 'Eucgr.F04207' => 'egr', 'FAN01G0570' => 'fan', 'FAN03G3351' => 'fan', 'FAN06G3702' => 'fan', 'FAN07G2149' => 'fan', 'FAN10G3758' => 'fan', 'FAN11G1170' => 'fan', 'FAN11G2050' => 'fan', 'FAN11G2724' => 'fan', 'FAN12G1700' => 'fan', 'FAN12G2028' => 'fan', 'FAN15G1160' => 'fan', 'FAN15G3063' => 'fan', 'FAN16G2540' => 'fan', 'FAN16G3077' => 'fan', 'FAN16G3624' => 'fan', 'FAN17G0221' => 'fan', 'FAN20G2492' => 'fan', 'FAN20G2905' => 'fan', 'FAN21G0548' => 'fan', 'FAN21G1300' => 'fan', 'FAN22G0077' => 'fan', 'FAN22G1315' => 'fan', 'FAN24G1280' => 'fan', 'FAN24G1445' => 'fan', 'FAN24G3527' => 'fan', 'FAN25G0464' => 'fan', 'FAN25G2885' => 'fan', 'FAN25G3270' => 'fan', 'FAN27G1101' => 'fan', 'FAN27G2846' => 'fan', 'FAN27G3524' => 'fan', 'FvH4_2g11770' => 'fve', 'FvH4_2g15630' => 'fve', 'FvH4_3g05570' => 'fve', 'FvH4_3g09110' => 'fve', 'FvH4_3g19940' => 'fve', 'FvH4_4g04821' => 'fve', 'FvH4_4g31480' => 'fve', 'FvH4_7g01740' => 'fve', 'Glyma.05G130400' => 'gma', 'Glyma.05G156400' => 'gma', 'Glyma.07G197000' => 'gma', 'Glyma.08G085151' => 'gma', 'Glyma.08G114500' => 'gma', 'Glyma.08G300400' => 'gma', 'Glyma.10G215800' => 'gma', 'Glyma.12G224400' => 'gma', 'Glyma.13G179300' => 'gma', 'Glyma.13G218151' => 'gma', 'Glyma.13G238800' => 'gma', 'Glyma.13G276900' => 'gma', 'Glyma.14G078200' => 'gma', 'Glyma.15G074500' => 'gma', 'Glyma.15G094100' => 'gma', 'Glyma.17G247200' => 'gma', 'Glyma.18G120100' => 'gma', 'Glyma.20G176000' => 'gma', 'Gohir.A01G063600' => 'ghi', 'Gohir.A01G170301' => 'ghi', 'Gohir.A02G060500' => 'ghi', 'Gohir.A05G133850' => 'ghi', 'Gohir.A05G161400' => 'ghi', 'Gohir.A06G012900' => 'ghi', 'Gohir.A06G035901' => 'ghi', 'Gohir.A06G127100' => 'ghi', 'Gohir.A06G210500' => 'ghi', 'Gohir.A08G008650' => 'ghi', 'Gohir.A09G072700' => 'ghi', 'Gohir.A09G088301' => 'ghi', 'Gohir.A10G040600' => 'ghi', 'Gohir.A12G036300' => 'ghi', 'Gohir.A12G143350' => 'ghi', 'Gohir.A12G165500' => 'ghi', 'Gohir.A13G145700' => 'ghi', 'Gohir.D01G050000' => 'ghi', 'Gohir.D01G051366' => 'ghi', 'Gohir.D01G161350' => 'ghi', 'Gohir.D02G065900' => 'ghi', 'Gohir.D05G164200' => 'ghi', 'Gohir.D05G355500' => 'ghi', 'Gohir.D06G010400' => 'ghi', 'Gohir.D06G111250' => 'ghi', 'Gohir.D06G132000' => 'ghi', 'Gohir.D06G210500' => 'ghi', 'Gohir.D07G165675' => 'ghi', 'Gohir.D08G062240' => 'ghi', 'Gohir.D08G086101' => 'ghi', 'Gohir.D08G138060' => 'ghi', 'Gohir.D09G072300' => 'ghi', 'Gohir.D10G041400' => 'ghi', 'Gohir.D11G191020' => 'ghi', 'Gohir.D11G212066' => 'ghi', 'Gohir.D12G036300' => 'ghi', 'Gohir.D12G168600' => 'ghi', 'Gohir.D13G150600' => 'ghi', 'Gorai.001G057300' => 'gra', 'Gorai.002G069900' => 'gra', 'Gorai.002G200000' => 'gra', 'Gorai.003G067600' => 'gra', 'Gorai.005G074800' => 'gra', 'Gorai.006G087300' => 'gra', 'Gorai.008G037500' => 'gra', 'Gorai.008G181400' => 'gra', 'Gorai.009G169400' => 'gra', 'Gorai.009G387900' => 'gra', 'Gorai.010G013300' => 'gra', 'Gorai.010G153800' => 'gra', 'Gorai.010G255800' => 'gra', 'Gorai.011G043700' => 'gra', 'Gorai.011G198900' => 'gra', 'Gorai.013G168400' => 'gra', 'GSVIVG01005212001' => 'vvi', 'GSVIVG01006163001' => 'vvi', 'GSVIVG01009625001' => 'vvi', 'GSVIVG01014338001' => 'vvi', 'GSVIVG01020005001' => 'vvi', 'GSVIVG01021450001' => 'vvi', 'GSVIVG01023975001' => 'vvi', 'GSVIVG01034490001' => 'vvi', 'HanXRQChr04g0112071' => 'han', 'HanXRQChr05g0131151' => 'han', 'HanXRQChr09g0262371' => 'han', 'HanXRQChr09g0268401' => 'han', 'HanXRQChr10g0279241' => 'han', 'HanXRQChr10g0297961' => 'han', 'HanXRQChr11g0326231' => 'han', 'HanXRQChr11g0328471' => 'han', 'HanXRQChr16g0507941' => 'han', 'HanXRQChr17g0560211' => 'han', 'Haze_02108' => 'cav', 'Haze_02428' => 'cav', 'Haze_05593' => 'cav', 'Haze_06448' => 'cav', 'Haze_09427' => 'cav', 'Haze_12022' => 'cav', 'Haze_17612' => 'cav', 'Haze_17928' => 'cav', 'Hma1.2p1_0032F.1_g019250' => 'hma', 'Hma1.2p1_0163F.1_g072690' => 'hma', 'Hma1.2p1_0265F.1_g106710' => 'hma', 'Hma1.2p1_0286F.1_g113970' => 'hma', 'Hma1.2p1_0363F.1_g136640' => 'hma', 'Hma1.2p1_0584F.1_g183470' => 'hma', 'Hma1.2p1_0885F.1_g232570' => 'hma', 'HPP92_006022' => 'vpl', 'HPP92_007320' => 'vpl', 'HPP92_011521' => 'vpl', 'HPP92_019387' => 'vpl', 'HPP92_024038' => 'vpl', 'Hund05891' => 'sun', 'Hund06450' => 'sun', 'Hund12053' => 'sun', 'Hund16800' => 'sun', 'Hund21222' => 'sun', 'Hund22896' => 'sun', 'Hund23746' => 'sun', 'Hund27083' => 'sun', 'Lalb_Chr02g0141831' => 'lal', 'Lalb_Chr02g0141841' => 'lal', 'Lalb_Chr05g0220411' => 'lal', 'Lalb_Chr06g0162081' => 'lal', 'Lalb_Chr09g0327651' => 'lal', 'Lalb_Chr13g0295051' => 'lal', 'Lalb_Chr15g0086801' => 'lal', 'Lalb_Chr16g0383781' => 'lal', 'Lalb_Chr16g0383791' => 'lal', 'Lalb_Chr18g0055441' => 'lal', 'Lalb_Chr18g0059611' => 'lal', 'Lalb_Chr20g0109661' => 'lal', 'Lalb_Chr20g0109831' => 'lal', 'Lalb_Chr20g0121871' => 'lal', 'Lalb_Chr22g0355361' => 'lal', 'Lalb_Chr25g0286371' => 'lal', 'Lj1A1187G43' => 'lonja', 'Lj1A1205T50' => 'lonja', 'Lj1A800G33' => 'lonja', 'Lj1C1187T7' => 'lonja', 'Lj1C843T11' => 'lonja', 'Lj1g0010940' => 'lja', 'Lj2A288T69' => 'lonja', 'Lj3g0024276' => 'lja', 'Lj4A47T76' => 'lonja', 'Lj4g0005805' => 'lja', 'Lj4g0006097' => 'lja', 'Lj4g0008528' => 'lja', 'Lj4g0024907' => 'lja', 'Lj5g0012472' => 'lja', 'Lj5g0018648' => 'lja', 'Lj6C789G1' => 'lonja', 'Lj6g0004000' => 'lja', 'Lj7A292G67' => 'lonja', 'Lj7A292T64' => 'lonja', 'Lj9A400T58' => 'lonja', 'Lsat_1_v5_gn_1_126181' => 'lsa', 'Lsat_1_v5_gn_4_123041' => 'lsa', 'Lsat_1_v5_gn_4_133620' => 'lsa', 'Lsat_1_v5_gn_4_53221' => 'lsa', 'Lsat_1_v5_gn_4_71961' => 'lsa', 'Lsat_1_v5_gn_7_105241' => 'lsa', 'Lsat_1_v5_gn_7_21361' => 'lsa', 'Lsat_1_v5_gn_7_28860' => 'lsa', 'Lsat_1_v5_gn_7_31260' => 'lsa', 'Lsat_1_v5_gn_8_52801' => 'lsa', 'Manes.02G191400' => 'mes', 'Manes.03G110100' => 'mes', 'Manes.04G071100' => 'mes', 'Manes.05G100500' => 'mes', 'Manes.05G164700' => 'mes', 'Manes.15G087000' => 'mes', 'Manes.15G121500' => 'mes', 'Manes.16G028300' => 'mes', 'Manes.17G046100' => 'mes', 'Manes.17G069800' => 'mes', 'Manes.18G100500' => 'mes', 'Mapoly0002s0109' => 'mpo', 'Mapoly0024s0007' => 'mpo', 'Mapoly0089s0032' => 'mpo', 'MBI04_g42241_MAGBIO' => 'mbi', 'MBI05_g11988_MAGBIO' => 'mbi', 'MBI05_g35452_MAGBIO' => 'mbi', 'MBI07_g30179_MAGBIO' => 'mbi', 'MBI07_g35859_MAGBIO' => 'mbi', 'MBI07_g35860_MAGBIO' => 'mbi', 'MBI07_g37166_MAGBIO' => 'mbi', 'MBI08_g18172_MAGBIO' => 'mbi', 'MBI09_g08441_MAGBIO' => 'mbi', 'MBI13_g01676_MAGBIO' => 'mbi', 'MBI14_g42955_MAGBIO' => 'mbi', 'MBI16_g13161_MAGBIO' => 'mbi', 'MBI17_g27204_MAGBIO' => 'mbi', 'MBI19_g21595_MAGBIO' => 'mbi', 'MD00G1148400' => 'mdo', 'MD02G1301200' => 'mdo', 'MD03G1227800' => 'mdo', 'MD05G1041100' => 'mdo', 'MD05G1124800' => 'mdo', 'MD05G1284000' => 'mdo', 'MD05G1338800' => 'mdo', 'MD05G1338900' => 'mdo', 'MD07G1022800' => 'mdo', 'MD10G1047500' => 'mdo', 'MD10G1127500' => 'mdo', 'MD10G1262300' => 'mdo', 'MD10G1293800' => 'mdo', 'MD16G1074300' => 'mdo', 'Medtr1g021670' => 'mtr', 'Medtr1g096320' => 'mtr', 'Medtr2g013690' => 'mtr', 'Medtr2g019450' => 'mtr', 'Medtr2g085170' => 'mtr', 'Medtr4g088785' => 'mtr', 'Medtr8g055930' => 'mtr', 'Medtr8g085850' => 'mtr', 'MELO3C002605.2' => 'cme', 'MELO3C003891.2' => 'cme', 'MELO3C004012.2' => 'cme', 'MELO3C007134.2' => 'cme', 'MELO3C008118.2' => 'cme', 'MELO3C016700.2' => 'cme', 'MELO3C024127.2' => 'cme', 'MELO3C033361.2' => 'cme', 'MELO3C033362.2' => 'cme', 'Migut.C00430' => 'egut', 'Migut.C01246' => 'egut', 'Migut.E00101' => 'egut', 'Migut.H01486' => 'egut', 'Migut.H01939' => 'egut', 'Migut.K00360' => 'egut', 'Migut.M00910' => 'egut', 'Migut.M01139' => 'egut', 'Migut.N02677' => 'egut', 'MSTRG.13252' => 'ama', 'MSTRG.14701' => 'ama', 'MSTRG.1521' => 'ama', 'MSTRG.15884' => 'ama', 'MSTRG.16242' => 'ama', 'MSTRG.22285' => 'ama', 'MSTRG.22444' => 'ama', 'MSTRG.2349' => 'ama', 'MSTRG.26308' => 'ama', 'MSTRG.28296' => 'ama', 'MSTRG.9895' => 'ama', 'Nitab4.5_0000110g0060' => 'nta', 'Nitab4.5_0000420g0130' => 'nta', 'Nitab4.5_0000422g0030' => 'nta', 'Nitab4.5_0000560g0180' => 'nta', 'Nitab4.5_0000703g0100' => 'nta', 'Nitab4.5_0000786g0200' => 'nta', 'Nitab4.5_0001336g0020' => 'nta', 'Nitab4.5_0001796g0030' => 'nta', 'Nitab4.5_0003348g0060' => 'nta', 'Nitab4.5_0003698g0040' => 'nta', 'Nitab4.5_0003942g0090' => 'nta', 'Nitab4.5_0004775g0070' => 'nta', 'Nitab4.5_0004864g0030' => 'nta', 'Nitab4.5_0005615g0020' => 'nta', 'Nitab4.5_0009288g0030' => 'nta', 'Nitab4.5_0009341g0010' => 'nta', 'Nitab4.5_0009535g0010' => 'nta', 'Nn1g03995' => 'nnu', 'Nn1g04100' => 'nnu', 'Nn1g06530' => 'nnu', 'Nn3g16404' => 'nnu', 'Nn3g17212' => 'nnu', 'Nn3g20776' => 'nnu', 'Nn3g21923' => 'nnu', 'Nn5g27737' => 'nnu', 'Nn5g29461' => 'nnu', 'Nn7g38355' => 'nnu', 'Nn8g39873' => 'nnu', 'Oeu000548.2' => 'oeu', 'Oeu004672.1' => 'oeu', 'Oeu015605.2' => 'oeu', 'Oeu016092.1' => 'oeu', 'Oeu017879.3' => 'oeu', 'Oeu024910.1' => 'oeu', 'Oeu028965.1' => 'oeu', 'Oeu031269.1' => 'oeu', 'Oeu031270.1' => 'oeu', 'Oeu032535.1' => 'oeu', 'Oeu034151.1' => 'oeu', 'Oeu034152.1' => 'oeu', 'Oeu034588.2' => 'oeu', 'Oeu050846.1' => 'oeu', 'Oeu050849.2' => 'oeu', 'Oeu051063.2' => 'oeu', 'Oeu052368.1' => 'oeu', 'Oeu052370.1' => 'oeu', 'Os01g0210400' => 'osa', 'Os01g0304300' => 'osa', 'Os01g0749100' => 'osa', 'Os02g0745800' => 'osa', 'Os03g0769050' => 'osa', 'Os05g0531500' => 'osa', 'Os06g0724300' => 'osa', 'Os11g0198100' => 'osa', 'Peaxi162Scf00069g01425' => 'pax', 'Peaxi162Scf00280g00811' => 'pax', 'Peaxi162Scf00310g00615' => 'pax', 'Peaxi162Scf00362g00542' => 'pax', 'Peaxi162Scf00461g00310' => 'pax', 'Peaxi162Scf00530g00118' => 'pax', 'Peaxi162Scf00541g00057' => 'pax', 'Peaxi162Scf00661g00017' => 'pax', 'Peaxi162Scf00926g00027' => 'pax', 'Peaxi162Scf01064g00263' => 'pax', 'Peaxi162Scf01211g00135' => 'pax', 'PGR004G2336' => 'pgr', 'PGR042G0327' => 'pgr', 'PGR042G1957' => 'pgr', 'PGR042G2003' => 'pgr', 'PGR042G3929' => 'pgr', 'PGR083G1137' => 'pgr', 'PGR083G1364' => 'pgr', 'PGSC0003DMG400003381' => 'stu', 'PGSC0003DMG400003417' => 'stu', 'PGSC0003DMG400008981' => 'stu', 'PGSC0003DMG400012417' => 'stu', 'PGSC0003DMG400012823' => 'stu', 'PGSC0003DMG400016885' => 'stu', 'PGSC0003DMG400022812' => 'stu', 'PGSC0003DMG400029726' => 'stu', 'PGSC0003DMG401009243' => 'stu', 'PGSC0003DMG401031505' => 'stu', 'PGSC0003DMG402031505' => 'stu', 'Phvul.001G017600' => 'pvu', 'Phvul.002G193500' => 'pvu', 'Phvul.002G228900' => 'pvu', 'Phvul.002G236800' => 'pvu', 'Phvul.003G049500' => 'pvu', 'Phvul.005G072000' => 'pvu', 'Phvul.006G164800' => 'pvu', 'Phvul.006G185100' => 'pvu', 'Phvul.007G090000' => 'pvu', 'Potri.001G399800' => 'ptr', 'Potri.002G149900' => 'ptr', 'Potri.004G044100' => 'ptr', 'Potri.004G177600' => 'ptr', 'Potri.009G138000' => 'ptr', 'Potri.010G094000' => 'ptr', 'Potri.011G053000' => 'ptr', 'Potri.011G119300' => 'ptr', 'Potri.013G113700' => 'ptr', 'Potri.018G107800' => 'ptr', 'Potri.019G084100' => 'ptr', 'Pp3c14_23720' => 'ppa', 'Pp3c16_6340' => 'ppa', 'Pp3c23_13420' => 'ppa', 'Pp3c24_2740' => 'ppa', 'Pp3c25_860' => 'ppa', 'Pp3c8_21750' => 'ppa', 'Prupe.1G273000' => 'ppe', 'Prupe.1G273700' => 'ppe', 'Prupe.1G274100' => 'ppe', 'Prupe.2G023300' => 'ppe', 'Prupe.4G048000' => 'ppe', 'Prupe.4G080400' => 'ppe', 'Prupe.4G181200' => 'ppe', 'Prupe.8G056900' => 'ppe', 'Prupe.8G168700' => 'ppe', 'Psat1g189080' => 'psa', 'Psat1g204760' => 'psa', 'Psat4g175560' => 'psa', 'Psat4g177720' => 'psa', 'Psat5g244240' => 'psa', 'Psat6g010720' => 'psa', 'Psat6g187200' => 'psa', 'Psat7g072040' => 'psa', 'PSO017G3501' => 'pso', 'PSO063G2148' => 'pso', 'PSO063G5608' => 'pso', 'PSO210G6392' => 'pso', 'PSO541G2319' => 'pso', 'PSO541G2836' => 'pso', 'PSO541G4012' => 'pso', 'PSO541G6253' => 'pso', 'PSO675G0580' => 'pso', 'PSO675G0856' => 'pso', 'PSO675G5635' => 'pso', 'PSO675G9157' => 'pso', 'PSO832G1660' => 'pso', 'PSO832G1969' => 'pso', 'QL02p007186' => 'qlo', 'QL02p033904' => 'qlo', 'QL03p064391' => 'qlo', 'QL05p040593' => 'qlo', 'QL05p058242' => 'qlo', 'QL08p021825' => 'qlo', 'QL11p004981' => 'qlo', 'RcHm_v2.0_Chr1g0318301' => 'rch', 'RcHm_v2.0_Chr4g0418501' => 'rch', 'RcHm_v2.0_Chr4g0439971' => 'rch', 'RcHm_v2.0_Chr5g0008541' => 'rch', 'RcHm_v2.0_Chr5g0014101' => 'rch', 'RcHm_v2.0_Chr5g0014131' => 'rch', 'RcHm_v2.0_Chr5g0033621' => 'rch', 'RcHm_v2.0_Chr6g0272041' => 'rch', 'RcHm_v2.0_Chr6g0278831' => 'rch', 'Rhsim02G0130400' => 'rsi', 'Rhsim02G0171100' => 'rsi', 'Rhsim05G0053000' => 'rsi', 'Rhsim05G0053100' => 'rsi', 'Rhsim06G0096500' => 'rsi', 'Rhsim06G0096600' => 'rsi', 'Rhsim06G0199100' => 'rsi', 'Rhsim12G0062300' => 'rsi', 'Rhsim12G0062800' => 'rsi', 'Sabra02G0118600' => 'sbr', 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'Solyc03g079860.2' => 'sly', 'Solyc04g079770.3' => 'sly', 'Solyc05g007430.4' => 'sly', 'Solyc07g063150.3' => 'sly', 'Solyc08g016620.3' => 'sly', 'Solyc09g057590.3' => 'sly', 'Solyc09g057600.1' => 'sly', 'Solyc10g009050.3' => 'sly', 'Solyc11g017420.2' => 'sly', 'Sopen01g053810' => 'spe', 'Sopen02g023040' => 'spe', 'Sopen03g002440' => 'spe', 'Sopen04g033350' => 'spe', 'Sopen05g003310' => 'spe', 'Sopen07g004050' => 'spe', 'Sopen07g031340' => 'spe', 'Sopen08g006990' => 'spe', 'Sopen10g004830' => 'spe', 'Sopen11g009370' => 'spe', 'Sp1g24450' => 'spa', 'Sp1g29670' => 'spa', 'Sp1g39600' => 'spa', 'Sp2g11080' => 'spa', 'Sp2g13970' => 'spa', 'Sp4g16130' => 'spa', 'Sp6g13080' => 'spa', 'Sp7g37270' => 'spa', 'TAR371G0065' => 'tar', 'TAR376G0340' => 'tar', 'TAR376G0435' => 'tar', 'TAR381G0002' => 'tar', 'TAR381G1236' => 'tar', 'TAR624G0055' => 'tar', 'TAR624G0324' => 'tar', 'TAR624G0696' => 'tar', 'TAR624G0906' => 'tar', 'TAR625G0107' => 'tar', 'TAR626G0015' => 'tar', 'TAR626G1356' => 'tar', 'TAR627G0888' => 'tar', 'TAR628G0399' => 'tar', 'TAR628G1327' => 'tar', 'TAR629G2831' => 'tar', 'TAR629G2874' => 'tar', 'TAR633G1432' => 'tar', 'TAR633G2771' => 'tar', 'THA.LOC104803394' => 'tha', 'THA.LOC104805153' => 'tha', 'THA.LOC104806784' => 'tha', 'THA.LOC104810473' => 'tha', 'THA.LOC104813100' => 'tha', 'THA.LOC104814215' => 'tha', 'THA.LOC104815554' => 'tha', 'THA.LOC104820544' => 'tha', 'THA.LOC104824754' => 'tha', 'THA.LOC104827717' => 'tha', 'Thecc.02G031400' => 'tca', 'Thecc.02G055900' => 'tca', 'Thecc.02G350800' => 'tca', 'Thecc.06G150900' => 'tca', 'Thecc.06G186600' => 'tca', 'Thecc.07G089600' => 'tca', 'Thecc.08G020400' => 'tca', 'Thecc.08G182100' => 'tca', 'Thhalv10000873m.g' => 'esa', 'Thhalv10004185m.g' => 'esa', 'Thhalv10006981m.g' => 'esa', 'Thhalv10007204m.g' => 'esa', 'Thhalv10011374m.g' => 'esa', 'Thhalv10013482m.g' => 'esa', 'Thhalv10017801m.g' => 'esa', 'Thhalv10024983m.g' => 'esa', 'TPR.G12072' => 'tpr', 'TPR.G15769' => 'tpr', 'TPR.G16504' => 'tpr', 'TPR.G16506' => 'tpr', 'TPR.G24345' => 'tpr', 'TPR.G26666' => 'tpr', 'TPR.G27320' => 'tpr', 'TPR.G31819' => 'tpr', 'TPR.G38879' => 'tpr', 'TPR.G39015' => 'tpr', 'TPR.G8819' => 'tpr', 'TWI09G0924' => 'twi', 'TWI12G0811' => 'twi', 'TWI12G1294' => 'twi', 'TWI31G0150' => 'twi', 'TWI36G1262' => 'twi', 'TWI38G1287' => 'twi', 'TWI38G1633' => 'twi', 'TWI38G1982' => 'twi', 'TWI39G0116' => 'twi', 'TWI60G1011' => 'twi', 'TWI63G0171' => 'twi', 'TWI73G0839' => 'twi', 'TWI79G1511' => 'twi', 'unitig_0.g915' => 'ugi', 'unitig_0.g916' => 'ugi', 'unitig_21.g20219' => 'ugi', 'unitig_21.g20416' => 'ugi', 'unitig_578.g16132' => 'ugi', 'unitig_578.g16718' => 'ugi', 'unitig_62.g23481' => 'ugi', 'unitig_744.g24535' => 'ugi', 'unitig_749.g13525' => 'ugi', 'vmacro01248' => 'vma', 'vmacro02290' => 'vma', 'vmacro10946' => 'vma', 'vmacro11865' => 'vma', 'vmacro12493' => 'vma', 'vmacro17322' => 'vma', 'vmacro21599' => 'vma', 'vmacro23041' => 'vma', 'VMungo0251G0004' => 'vmu', 'VMungo0251G2639' => 'vmu', 'VMungo0251G2967' => 'vmu', 'VMungo0540G0864' => 'vmu', 'VMungo0540G1569' => 'vmu', 'VMungo0647G0317' => 'vmu', 'VMungo0720G1373' => 'vmu', 'VMungo0720G1508' => 'vmu', 'VMungo1080G0485' => 'vmu', 'VMungo1215G3177' => 'vmu', 'Zm00001eb112600' => 'zma', 'Zm00001eb120220' => 'zma', 'Zm00001eb153240' => 'zma', 'Zm00001eb168880' => 'zma', 'Zm00001eb213920' => 'zma', 'Zm00001eb228280' => 'zma', 'Zm00001eb254580' => 'zma', 'Zm00001eb272180' => 'zma', 'Zm00001eb293190' => 'zma', 'Zm00001eb322930' => 'zma', 'Zm00001eb353360' => 'zma', 'Zm00001eb353390' => 'zma', 'Zm00001eb353430' => 'zma', 'Zm00001eb353440' => 'zma', 'Zm00001eb353780' => 'zma' ), 'gf_id' => 'HOM05D000499', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000499' ), 'data_identifier' => 'HOM05D000499', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000499', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1066', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p29780' => 'bna', 'A02p33180' => 'bna', 'A03p16470' => 'bna', 'A03p66010' => 'bna', 'A04p25970' => 'bna', 'A06p01270' => 'bna', 'A06p46080' => 'bna', 'A07p11400' => 'bna', 'A08p01840' => 'bna', 'A08p08230' => 'bna', 'A08p25740' => 'bna', 'A09p32070' => 'bna', 'A09p37830' => 'bna', 'A09p42840' => 'bna', 'A09p42850' => 'bna', 'Aa31LG10G2060' => 'aar', 'Aa31LG2G7410' => 'aar', 'Aa31LG6G10200' => 'aar', 'Aa31LG6G16680' => 'aar', 'Aa31LG6G8470' => 'aar', 'Aa31LG9G12730' => 'aar', 'Aa31LG9G13680' => 'aar', 'Aa31LG9G14920' => 'aar', 'Aa31LG9G6650' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4977' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5467' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3254' => 'aag', 'Actinidia02578' => 'ach', 'Actinidia07693' => 'ach', 'Actinidia08413' => 'ach', 'Actinidia08414' => 'ach', 'Actinidia15289' => 'ach', 'Actinidia19871' => 'ach', 'Actinidia21475' => 'ach', 'Actinidia22576' => 'ach', 'Actinidia28327' => 'ach', 'Actinidia32491' => 'ach', 'Actinidia39463' => 'ach', 'Actinidia39571' => 'ach', 'Ah.01g013750' => 'amhyb', 'Ah.01g023210' => 'amhyb', 'Ah.04g164850' => 'amhyb', 'Ah.05g178060' => 'amhyb', 'Ah.07g204270' => 'amhyb', 'Ah.07g208480' => 'amhyb', 'Ah.09g237410' => 'amhyb', 'Ah.14g089460' => 'amhyb', 'AL1G41790' => 'aly', 'AL1G49050' => 'aly', 'AL1G53810' => 'aly', 'AL1G61400' => 'aly', 'AL4G18580' => 'aly', 'AL5G12510' => 'aly', 'AL5G12540' => 'aly', 'AL6G43230' => 'aly', 'AL7G10370' => 'aly', 'AL7G19250' => 'aly', 'AL8G12240' => 'aly', 'AL8G18540' => 'aly', 'Aqoxy1G02409' => 'aox', 'Aqoxy2G03993' => 'aox', 'Aqoxy3G03357' => 'aox', 'Aqoxy4G00785' => 'aox', 'Aqoxy5G02598' => 'aox', 'Aqoxy6G00132' => 'aox', 'Aqoxy7G01776' => 'aox', 'Aqoxy7G02316' => 'aox', 'Aqoxy7G03973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.12AFKW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B8730' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27IQR1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3F75VG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3RE0GA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41TCQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.527VTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FIR39' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5W8UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DA38EV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ63HS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H1I32C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HC27T5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4M8AP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7N3CZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9UVDZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LS1NQA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT1D4B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SKC4TM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCFV76' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF9Q1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQWD9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1ZM88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WE07RT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YCK7VH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJE6Q6' => 'arhy', 'AT1G28240' => 'ath', 'AT1G34550' => 'ath', 'AT1G53040' => 'ath', 'AT2G02910' => 'ath', 'AT4G09630' => 'ath', 'AT4G38500' => 'ath', 'AT5G42660' => 'ath', 'AT5G46220' => 'ath', 'ATR0152G026' => 'atr', 'ATR0564G343' => 'atr', 'ATR0706G151' => 'atr', 'ATR0733G207' => 'atr', 'ATR0751G234' => 'atr', 'ATR0807G048' => 'atr', 'ATR1091G084' => 'atr', 'Atru.chr10.1229' => 'acertr', 'Atru.chr10.1230' => 'acertr', 'Atru.chr10.1874' => 'acertr', 'Atru.chr11.1808' => 'acertr', 'Atru.chr13.1795' => 'acertr', 'Atru.chr13.570' => 'acertr', 'Atru.chr2.2608' => 'acertr', 'Atru.chr2.2609' => 'acertr', 'Atru.chr5.3428' => 'acertr', 'Atru.chr8.1171' => 'acertr', 'AUR62004651' => 'cqu', 'AUR62008675' => 'cqu', 'AUR62010014' => 'cqu', 'AUR62013004' => 'cqu', 'AUR62014825' => 'cqu', 'AUR62015015' => 'cqu', 'AUR62015151' => 'cqu', 'AUR62017020' => 'cqu', 'AUR62019422' => 'cqu', 'AUR62023570' => 'cqu', 'AUR62025571' => 'cqu', 'AUR62029098' => 'cqu', 'AUR62033863' => 'cqu', 'AUR62034296' => 'cqu', 'AUR62040075' => 'cqu', 'BcaB02g07334' => 'bca', 'BcaB02g10575' => 'bca', 'BcaB03g12119' => 'bca', 'BcaB03g12120' => 'bca', 'BcaB03g13945' => 'bca', 'BcaB04g17123' => 'bca', 'BcaB04g17867' => 'bca', 'BcaB04g19839' => 'bca', 'BcaB07g30317' => 'bca', 'BcaB07g32432' => 'bca', 'BcaB07g33362' => 'bca', 'BcaB08g36611' => 'bca', 'BcaC01g00028' => 'bca', 'BcaC01g01356' => 'bca', 'BcaC01g02034' => 'bca', 'BcaC01g06051' => 'bca', 'BcaC03g16839' => 'bca', 'BcaC03g17176' => 'bca', 'BcaC05g26829' => 'bca', 'BcaC06g31490' => 'bca', 'BcaC06g35344' => 'bca', 'BcaC06g36570' => 'bca', 'BcaC07g37537' => 'bca', 'BcaC08g43491' => 'bca', 'BcaC08g43773' => 'bca', 'BcaNung00234' => 'bca', 'BcaNung01982' => 'bca', 'BcaNung03707' => 'bca', 'BcaNung06454' => 'bca', 'BolC2t10762H' => 'bol', 'BolC2t11191H' => 'bol', 'BolC3t14322H' => 'bol', 'BolC3t19747H' => 'bol', 'BolC3t21425H' => 'bol', 'BolC4t27800H' => 'bol', 'BolC5t31423H' => 'bol', 'BolC6t35951H' => 'bol', 'BolC6t36282H' => 'bol', 'BolC7t40678H' => 'bol', 'BolC7t40679H' => 'bol', 'BolC7t42222H' => 'bol', 'BolC7t43492H' => 'bol', 'BolC7t46785H' => 'bol', 'BolC8t47853H' => 'bol', 'BolC9t56805H' => 'bol', 'BraA02t08000Z' => 'bra', 'BraA02t08341Z' => 'bra', 'BraA03t10936Z' => 'bra', 'BraA03t15657Z' => 'bra', 'BraA04t18100Z' => 'bra', 'BraA05t20523Z' => 'bra', 'BraA06t23353Z' => 'bra', 'BraA06t27473Z' => 'bra', 'BraA06t27769Z' => 'bra', 'BraA07t28928Z' => 'bra', 'BraA08t32236Z' => 'bra', 'BraA08t32841Z' => 'bra', 'BraA08t34524Z' => 'bra', 'BraA09t38742Z' => 'bra', 'BraA09t39295Z' => 'bra', 'C02p47180' => 'bna', 'C02p50990' => 'bna', 'C03p19360' => 'bna', 'C03p74950' => 'bna', 'C03p91000' => 'bna', 'C04p63260' => 'bna', 'C05p27050' => 'bna', 'C06p08750' => 'bna', 'C06p11490' => 'bna', 'C07p02820' => 'bna', 'C07p17180' => 'bna', 'C07p29440' => 'bna', 'C07p63730' => 'bna', 'C09p39260' => 'bna', 'CAN.G1164.34' => 'can', 'CAN.G1164.39' => 'can', 'CAN.G1530.3' => 'can', 'CAN.G162.61' => 'can', 'CAN.G176.6' => 'can', 'CAN.G289.49' => 'can', 'CAN.G370.21' => 'can', 'CAN.G370.22' => 'can', 'CAN.G371.117' => 'can', 'CAN.G58.37' => 'can', 'CAN.G588.98' => 'can', 'CANSAT21G2266' => 'cansat', 'CANSAT25G2799' => 'cansat', 'CANSAT35G0862' => 'cansat', 'CANSAT35G1704' => 'cansat', 'CANSAT35G1760' => 'cansat', 'CANSAT56G3971' => 'cansat', 'CANSAT56G4116' => 'cansat', 'CANSAT80G1259' => 'cansat', 'CARHR027730' => 'chi', 'CARHR033880' => 'chi', 'CARHR043270' => 'chi', 'CARHR145330' => 'chi', 'CARHR145340' => 'chi', 'CARHR175570' => 'chi', 'CARHR181570' => 'chi', 'CARHR258470' => 'chi', 'CARHR260490' => 'chi', 'CARHR294220' => 'chi', 'Carub.0001s2668' => 'cru', 'Carub.0001s3257' => 'cru', 'Carub.0001s4220' => 'cru', 'Carub.0005s0179' => 'cru', 'Carub.0006s2807' => 'cru', 'Carub.0007s0039' => 'cru', 'Carub.0008s0169' => 'cru', 'Carub.0008s0636' => 'cru', 'Ca_00338_v3' => 'car', 'Ca_00542_v3' => 'car', 'Ca_01844_v3' => 'car', 'Ca_10611_v3' => 'car', 'Ca_13326_v3' => 'car', 'Ca_17944_v3' => 'car', 'Ca_18546_v3' => 'car', 'Ca_24219_v3' => 'car', 'Ca_29972_v3' => 'car', 'CBR_g3681' => 'cbr', 'CBR_g40021' => 'cbr', 'Cc01_g08140' => 'ccan', 'Cc02_g13410' => 'ccan', 'Cc02_g37480' => 'ccan', 'Cc05_g12030' => 'ccan', 'Cc09_g03370' => 'ccan', 'Cc09_g10300' => 'ccan', 'Cc10_g03530' => 'ccan', 'Cc10_g11380' => 'ccan', 'CDE01G0176' => 'cde', 'CDE02G0675' => 'cde', 'CDE02G0942' => 'cde', 'CDE02G1153' => 'cde', 'CDE02G4177' => 'cde', 'CDE04G2117' => 'cde', 'CDE04G2736' => 'cde', 'CDE08G1161' => 'cde', 'CDE09G1238' => 'cde', 'Cfa000467' => 'cfa', 'Cfa000947' => 'cfa', 'Cfa004969' => 'cfa', 'Cfa005284' => 'cfa', 'Cfa008993' => 'cfa', 'Cfa018187' => 'cfa', 'Cfa018454' => 'cfa', 'Cfa020585' => 'cfa', 'Ciclev10000424m.g' => 'ccl', 'Ciclev10003605m.g' => 'ccl', 'Ciclev10007828m.g' => 'ccl', 'Ciclev10014620m.g' => 'ccl', 'Ciclev10015169m.g' => 'ccl', 'Ciclev10018291m.g' => 'ccl', 'Ciclev10028256m.g' => 'ccl', 'Ciclev10033822m.g' => 'ccl', 'CiPaw.05G060300' => 'cil', 'CiPaw.05G085000' => 'cil', 'CiPaw.06G083700' => 'cil', 'CiPaw.06G120300' => 'cil', 'CiPaw.09G060500' => 'cil', 'CiPaw.09G123800' => 'cil', 'CiPaw.11G169700' => 'cil', 'CiPaw.12G118300' => 'cil', 'CiPaw.15G071000' => 'cil', 'CiPaw.15G081900' => 'cil', 'ClCG01G024610' => 'cla', 'ClCG03G006070' => 'cla', 'ClCG05G019250' => 'cla', 'ClCG09G009500' => 'cla', 'ClCG11G008200' => 'cla', 'ClCG11G018080' => 'cla', 'COL.COLO4_17373' => 'col', 'COL.COLO4_22994' => 'col', 'COL.COLO4_26389' => 'col', 'COL.COLO4_27170' => 'col', 'COL.COLO4_31074' => 'col', 'COL.COLO4_31465' => 'col', 'COL.COLO4_36438' => 'col', 'COL.COLO4_36439' => 'col', 'Cpa.g.c38781' => 'cpa', 'Cpa.g.sc128.12' => 'cpa', 'Cpa.g.sc166.7' => 'cpa', 'Cpa.g.sc166.8' => 'cpa', 'Cpa.g.sc20.111' => 'cpa', 'Cpa.g.sc27.31' => 'cpa', 'Cpa.g.sc64.36' => 'cpa', 'Cpa.g.sc64.37' => 'cpa', 'Cpa.g.sc66.49' => 'cpa', 'Cpa.g.sc80.64' => 'cpa', 'CsaV3_1G012320' => 'csa', 'CsaV3_2G008480' => 'csa', 'CsaV3_2G033450' => 'csa', 'CsaV3_3G044830' => 'csa', 'CsaV3_4G033710' => 'csa', 'CsaV3_6G051730' => 'csa', 'CsaV3_7G025350' => 'csa', 'CSS0001067' => 'camsi', 'CSS0005996' => 'camsi', 'CSS0006590' => 'camsi', 'CSS0009673' => 'camsi', 'CSS0010201' => 'camsi', 'CSS0010549' => 'camsi', 'CSS0011364' => 'camsi', 'CSS0014473' => 'camsi', 'CSS0014961' => 'camsi', 'CSS0020191' => 'camsi', 'CSS0021165' => 'camsi', 'CSS0022306' => 'camsi', 'CSS0030591' => 'camsi', 'CSS0030696' => 'camsi', 'CSS0032653' => 'camsi', 'CSS0037487' => 'camsi', 'CSS0041102' => 'camsi', 'CSS0041261' => 'camsi', 'CSS0046246' => 'camsi', 'CSS0049256' => 'camsi', 'DCAR_004075' => 'dca', 'DCAR_011538' => 'dca', 'DCAR_019553' => 'dca', 'DCAR_020952' => 'dca', 'DCAR_021739' => 'dca', 'DCAR_027407' => 'dca', 'DCAR_027913' => 'dca', 'DCAR_028066' => 'dca', 'Dinv05899' => 'din', 'Dinv07563' => 'din', 'Dinv08010' => 'din', 'Dinv14125' => 'din', 'Dinv20172' => 'din', 'Dinv30743' => 'din', 'Dinv31229' => 'din', 'Dinv34162' => 'din', 'Dinv36028' => 'din', 'Dinv39368' => 'din', 'Dinv40565' => 'din', 'Dinv41706' => 'din', 'Duzib052G0089' => 'dzi', 'Duzib116G0641' => 'dzi', 'Duzib132G0069' => 'dzi', 'Duzib132G1219' => 'dzi', 'Duzib147G0278' => 'dzi', 'Duzib160G0480' => 'dzi', 'Duzib170G0661' => 'dzi', 'Duzib177G0591' => 'dzi', 'Duzib187G1353' => 'dzi', 'Duzib192G0858' => 'dzi', 'Duzib192G0883' => 'dzi', 'Duzib213G0506' => 'dzi', 'Duzib235G0289' => 'dzi', 'Duzib251G0422' => 'dzi', 'ECA232G3898' => 'eca', 'ECA233G5950' => 'eca', 'ECA234G1699' => 'eca', 'ECA234G2421' => 'eca', 'ECA236G0426' => 'eca', 'ECA236G4331' => 'eca', 'ECA248G2573' => 'eca', 'EL10Ac1g00077' => 'bvu', 'EL10Ac1g01746' => 'bvu', 'EL10Ac2g03464' => 'bvu', 'EL10Ac4g08176' => 'bvu', 'EL10Ac7g17521' => 'bvu', 'EL10Ac8g20386' => 'bvu', 'EL10Ac9g21343' => 'bvu', 'EL10Ac9g22688' => 'bvu', 'Eucgr.B03434' => 'egr', 'Eucgr.D00618' => 'egr', 'Eucgr.E02395' => 'egr', 'Eucgr.F01129' => 'egr', 'Eucgr.F02622' => 'egr', 'Eucgr.F04207' => 'egr', 'FAN01G0570' => 'fan', 'FAN03G3351' => 'fan', 'FAN06G3702' => 'fan', 'FAN07G2149' => 'fan', 'FAN10G3758' => 'fan', 'FAN11G1170' => 'fan', 'FAN11G2050' => 'fan', 'FAN11G2724' => 'fan', 'FAN12G1700' => 'fan', 'FAN12G2028' => 'fan', 'FAN15G1160' => 'fan', 'FAN15G3063' => 'fan', 'FAN16G2540' => 'fan', 'FAN16G3077' => 'fan', 'FAN16G3624' => 'fan', 'FAN17G0221' => 'fan', 'FAN20G2492' => 'fan', 'FAN20G2905' => 'fan', 'FAN21G0548' => 'fan', 'FAN21G1300' => 'fan', 'FAN22G0077' => 'fan', 'FAN22G1315' => 'fan', 'FAN24G1280' => 'fan', 'FAN24G1445' => 'fan', 'FAN24G3527' => 'fan', 'FAN25G0464' => 'fan', 'FAN25G2885' => 'fan', 'FAN25G3270' => 'fan', 'FAN27G1101' => 'fan', 'FAN27G2846' => 'fan', 'FAN27G3524' => 'fan', 'FvH4_2g11770' => 'fve', 'FvH4_2g15630' => 'fve', 'FvH4_3g05570' => 'fve', 'FvH4_3g09110' => 'fve', 'FvH4_3g19940' => 'fve', 'FvH4_4g04821' => 'fve', 'FvH4_4g31480' => 'fve', 'FvH4_7g01740' => 'fve', 'Glyma.05G130400' => 'gma', 'Glyma.05G156400' => 'gma', 'Glyma.07G197000' => 'gma', 'Glyma.08G085151' => 'gma', 'Glyma.08G114500' => 'gma', 'Glyma.08G300400' => 'gma', 'Glyma.10G215800' => 'gma', 'Glyma.12G224400' => 'gma', 'Glyma.13G179300' => 'gma', 'Glyma.13G218151' => 'gma', 'Glyma.13G238800' => 'gma', 'Glyma.13G276900' => 'gma', 'Glyma.14G078200' => 'gma', 'Glyma.15G074500' => 'gma', 'Glyma.15G094100' => 'gma', 'Glyma.17G247200' => 'gma', 'Glyma.18G120100' => 'gma', 'Glyma.20G176000' => 'gma', 'Gohir.A01G063600' => 'ghi', 'Gohir.A01G170301' => 'ghi', 'Gohir.A02G060500' => 'ghi', 'Gohir.A05G133850' => 'ghi', 'Gohir.A05G161400' => 'ghi', 'Gohir.A06G012900' => 'ghi', 'Gohir.A06G035901' => 'ghi', 'Gohir.A06G127100' => 'ghi', 'Gohir.A06G210500' => 'ghi', 'Gohir.A08G008650' => 'ghi', 'Gohir.A09G072700' => 'ghi', 'Gohir.A09G088301' => 'ghi', 'Gohir.A10G040600' => 'ghi', 'Gohir.A12G036300' => 'ghi', 'Gohir.A12G143350' => 'ghi', 'Gohir.A12G165500' => 'ghi', 'Gohir.A13G145700' => 'ghi', 'Gohir.D01G050000' => 'ghi', 'Gohir.D01G051366' => 'ghi', 'Gohir.D01G161350' => 'ghi', 'Gohir.D02G065900' => 'ghi', 'Gohir.D05G164200' => 'ghi', 'Gohir.D05G355500' => 'ghi', 'Gohir.D06G010400' => 'ghi', 'Gohir.D06G111250' => 'ghi', 'Gohir.D06G132000' => 'ghi', 'Gohir.D06G210500' => 'ghi', 'Gohir.D07G165675' => 'ghi', 'Gohir.D08G062240' => 'ghi', 'Gohir.D08G086101' => 'ghi', 'Gohir.D08G138060' => 'ghi', 'Gohir.D09G072300' => 'ghi', 'Gohir.D10G041400' => 'ghi', 'Gohir.D11G191020' => 'ghi', 'Gohir.D11G212066' => 'ghi', 'Gohir.D12G036300' => 'ghi', 'Gohir.D12G168600' => 'ghi', 'Gohir.D13G150600' => 'ghi', 'Gorai.001G057300' => 'gra', 'Gorai.002G069900' => 'gra', 'Gorai.002G200000' => 'gra', 'Gorai.003G067600' => 'gra', 'Gorai.005G074800' => 'gra', 'Gorai.006G087300' => 'gra', 'Gorai.008G037500' => 'gra', 'Gorai.008G181400' => 'gra', 'Gorai.009G169400' => 'gra', 'Gorai.009G387900' => 'gra', 'Gorai.010G013300' => 'gra', 'Gorai.010G153800' => 'gra', 'Gorai.010G255800' => 'gra', 'Gorai.011G043700' => 'gra', 'Gorai.011G198900' => 'gra', 'Gorai.013G168400' => 'gra', 'GSVIVG01005212001' => 'vvi', 'GSVIVG01006163001' => 'vvi', 'GSVIVG01009625001' => 'vvi', 'GSVIVG01014338001' => 'vvi', 'GSVIVG01020005001' => 'vvi', 'GSVIVG01021450001' => 'vvi', 'GSVIVG01023975001' => 'vvi', 'GSVIVG01034490001' => 'vvi', 'HanXRQChr04g0112071' => 'han', 'HanXRQChr05g0131151' => 'han', 'HanXRQChr09g0262371' => 'han', 'HanXRQChr09g0268401' => 'han', 'HanXRQChr10g0279241' => 'han', 'HanXRQChr10g0297961' => 'han', 'HanXRQChr11g0326231' => 'han', 'HanXRQChr11g0328471' => 'han', 'HanXRQChr16g0507941' => 'han', 'HanXRQChr17g0560211' => 'han', 'Haze_02108' => 'cav', 'Haze_02428' => 'cav', 'Haze_05593' => 'cav', 'Haze_06448' => 'cav', 'Haze_09427' => 'cav', 'Haze_12022' => 'cav', 'Haze_17612' => 'cav', 'Haze_17928' => 'cav', 'Hma1.2p1_0032F.1_g019250' => 'hma', 'Hma1.2p1_0163F.1_g072690' => 'hma', 'Hma1.2p1_0265F.1_g106710' => 'hma', 'Hma1.2p1_0286F.1_g113970' => 'hma', 'Hma1.2p1_0363F.1_g136640' => 'hma', 'Hma1.2p1_0584F.1_g183470' => 'hma', 'Hma1.2p1_0885F.1_g232570' => 'hma', 'HPP92_006022' => 'vpl', 'HPP92_007320' => 'vpl', 'HPP92_011521' => 'vpl', 'HPP92_019387' => 'vpl', 'HPP92_024038' => 'vpl', 'Hund05891' => 'sun', 'Hund06450' => 'sun', 'Hund12053' => 'sun', 'Hund16800' => 'sun', 'Hund21222' => 'sun', 'Hund22896' => 'sun', 'Hund23746' => 'sun', 'Hund27083' => 'sun', 'Lalb_Chr02g0141831' => 'lal', 'Lalb_Chr02g0141841' => 'lal', 'Lalb_Chr05g0220411' => 'lal', 'Lalb_Chr06g0162081' => 'lal', 'Lalb_Chr09g0327651' => 'lal', 'Lalb_Chr13g0295051' => 'lal', 'Lalb_Chr15g0086801' => 'lal', 'Lalb_Chr16g0383781' => 'lal', 'Lalb_Chr16g0383791' => 'lal', 'Lalb_Chr18g0055441' => 'lal', 'Lalb_Chr18g0059611' => 'lal', 'Lalb_Chr20g0109661' => 'lal', 'Lalb_Chr20g0109831' => 'lal', 'Lalb_Chr20g0121871' => 'lal', 'Lalb_Chr22g0355361' => 'lal', 'Lalb_Chr25g0286371' => 'lal', 'Lj1A1187G43' => 'lonja', 'Lj1A1205T50' => 'lonja', 'Lj1A800G33' => 'lonja', 'Lj1C1187T7' => 'lonja', 'Lj1C843T11' => 'lonja', 'Lj1g0010940' => 'lja', 'Lj2A288T69' => 'lonja', 'Lj3g0024276' => 'lja', 'Lj4A47T76' => 'lonja', 'Lj4g0005805' => 'lja', 'Lj4g0006097' => 'lja', 'Lj4g0008528' => 'lja', 'Lj4g0024907' => 'lja', 'Lj5g0012472' => 'lja', 'Lj5g0018648' => 'lja', 'Lj6C789G1' => 'lonja', 'Lj6g0004000' => 'lja', 'Lj7A292G67' => 'lonja', 'Lj7A292T64' => 'lonja', 'Lj9A400T58' => 'lonja', 'Lsat_1_v5_gn_1_126181' => 'lsa', 'Lsat_1_v5_gn_4_123041' => 'lsa', 'Lsat_1_v5_gn_4_133620' => 'lsa', 'Lsat_1_v5_gn_4_53221' => 'lsa', 'Lsat_1_v5_gn_4_71961' => 'lsa', 'Lsat_1_v5_gn_7_105241' => 'lsa', 'Lsat_1_v5_gn_7_21361' => 'lsa', 'Lsat_1_v5_gn_7_28860' => 'lsa', 'Lsat_1_v5_gn_7_31260' => 'lsa', 'Lsat_1_v5_gn_8_52801' => 'lsa', 'Manes.02G191400' => 'mes', 'Manes.03G110100' => 'mes', 'Manes.04G071100' => 'mes', 'Manes.05G100500' => 'mes', 'Manes.05G164700' => 'mes', 'Manes.15G087000' => 'mes', 'Manes.15G121500' => 'mes', 'Manes.16G028300' => 'mes', 'Manes.17G046100' => 'mes', 'Manes.17G069800' => 'mes', 'Manes.18G100500' => 'mes', 'Mapoly0002s0109' => 'mpo', 'Mapoly0024s0007' => 'mpo', 'Mapoly0089s0032' => 'mpo', 'MBI04_g42241_MAGBIO' => 'mbi', 'MBI05_g11988_MAGBIO' => 'mbi', 'MBI05_g35452_MAGBIO' => 'mbi', 'MBI07_g30179_MAGBIO' => 'mbi', 'MBI07_g35859_MAGBIO' => 'mbi', 'MBI07_g35860_MAGBIO' => 'mbi', 'MBI07_g37166_MAGBIO' => 'mbi', 'MBI08_g18172_MAGBIO' => 'mbi', 'MBI09_g08441_MAGBIO' => 'mbi', 'MBI13_g01676_MAGBIO' => 'mbi', 'MBI14_g42955_MAGBIO' => 'mbi', 'MBI16_g13161_MAGBIO' => 'mbi', 'MBI17_g27204_MAGBIO' => 'mbi', 'MBI19_g21595_MAGBIO' => 'mbi', 'MD00G1148400' => 'mdo', 'MD02G1301200' => 'mdo', 'MD03G1227800' => 'mdo', 'MD05G1041100' => 'mdo', 'MD05G1124800' => 'mdo', 'MD05G1284000' => 'mdo', 'MD05G1338800' => 'mdo', 'MD05G1338900' => 'mdo', 'MD07G1022800' => 'mdo', 'MD10G1047500' => 'mdo', 'MD10G1127500' => 'mdo', 'MD10G1262300' => 'mdo', 'MD10G1293800' => 'mdo', 'MD16G1074300' => 'mdo', 'Medtr1g021670' => 'mtr', 'Medtr1g096320' => 'mtr', 'Medtr2g013690' => 'mtr', 'Medtr2g019450' => 'mtr', 'Medtr2g085170' => 'mtr', 'Medtr4g088785' => 'mtr', 'Medtr8g055930' => 'mtr', 'Medtr8g085850' => 'mtr', 'MELO3C002605.2' => 'cme', 'MELO3C003891.2' => 'cme', 'MELO3C004012.2' => 'cme', 'MELO3C007134.2' => 'cme', 'MELO3C008118.2' => 'cme', 'MELO3C016700.2' => 'cme', 'MELO3C024127.2' => 'cme', 'MELO3C033361.2' => 'cme', 'MELO3C033362.2' => 'cme', 'Migut.C00430' => 'egut', 'Migut.C01246' => 'egut', 'Migut.E00101' => 'egut', 'Migut.H01486' => 'egut', 'Migut.H01939' => 'egut', 'Migut.K00360' => 'egut', 'Migut.M00910' => 'egut', 'Migut.M01139' => 'egut', 'Migut.N02677' => 'egut', 'MSTRG.13252' => 'ama', 'MSTRG.14701' => 'ama', 'MSTRG.1521' => 'ama', 'MSTRG.15884' => 'ama', 'MSTRG.16242' => 'ama', 'MSTRG.22285' => 'ama', 'MSTRG.22444' => 'ama', 'MSTRG.2349' => 'ama', 'MSTRG.26308' => 'ama', 'MSTRG.28296' => 'ama', 'MSTRG.9895' => 'ama', 'Nitab4.5_0000110g0060' => 'nta', 'Nitab4.5_0000420g0130' => 'nta', 'Nitab4.5_0000422g0030' => 'nta', 'Nitab4.5_0000560g0180' => 'nta', 'Nitab4.5_0000703g0100' => 'nta', 'Nitab4.5_0000786g0200' => 'nta', 'Nitab4.5_0001336g0020' => 'nta', 'Nitab4.5_0001796g0030' => 'nta', 'Nitab4.5_0003348g0060' => 'nta', 'Nitab4.5_0003698g0040' => 'nta', 'Nitab4.5_0003942g0090' => 'nta', 'Nitab4.5_0004775g0070' => 'nta', 'Nitab4.5_0004864g0030' => 'nta', 'Nitab4.5_0005615g0020' => 'nta', 'Nitab4.5_0009288g0030' => 'nta', 'Nitab4.5_0009341g0010' => 'nta', 'Nitab4.5_0009535g0010' => 'nta', 'Nn1g03995' => 'nnu', 'Nn1g04100' => 'nnu', 'Nn1g06530' => 'nnu', 'Nn3g16404' => 'nnu', 'Nn3g17212' => 'nnu', 'Nn3g20776' => 'nnu', 'Nn3g21923' => 'nnu', 'Nn5g27737' => 'nnu', 'Nn5g29461' => 'nnu', 'Nn7g38355' => 'nnu', 'Nn8g39873' => 'nnu', 'Oeu000548.2' => 'oeu', 'Oeu004672.1' => 'oeu', 'Oeu015605.2' => 'oeu', 'Oeu016092.1' => 'oeu', 'Oeu017879.3' => 'oeu', 'Oeu024910.1' => 'oeu', 'Oeu028965.1' => 'oeu', 'Oeu031269.1' => 'oeu', 'Oeu031270.1' => 'oeu', 'Oeu032535.1' => 'oeu', 'Oeu034151.1' => 'oeu', 'Oeu034152.1' => 'oeu', 'Oeu034588.2' => 'oeu', 'Oeu050846.1' => 'oeu', 'Oeu050849.2' => 'oeu', 'Oeu051063.2' => 'oeu', 'Oeu052368.1' => 'oeu', 'Oeu052370.1' => 'oeu', 'Os01g0210400' => 'osa', 'Os01g0304300' => 'osa', 'Os01g0749100' => 'osa', 'Os02g0745800' => 'osa', 'Os03g0769050' => 'osa', 'Os05g0531500' => 'osa', 'Os06g0724300' => 'osa', 'Os11g0198100' => 'osa', 'Peaxi162Scf00069g01425' => 'pax', 'Peaxi162Scf00280g00811' => 'pax', 'Peaxi162Scf00310g00615' => 'pax', 'Peaxi162Scf00362g00542' => 'pax', 'Peaxi162Scf00461g00310' => 'pax', 'Peaxi162Scf00530g00118' => 'pax', 'Peaxi162Scf00541g00057' => 'pax', 'Peaxi162Scf00661g00017' => 'pax', 'Peaxi162Scf00926g00027' => 'pax', 'Peaxi162Scf01064g00263' => 'pax', 'Peaxi162Scf01211g00135' => 'pax', 'PGR004G2336' => 'pgr', 'PGR042G0327' => 'pgr', 'PGR042G1957' => 'pgr', 'PGR042G2003' => 'pgr', 'PGR042G3929' => 'pgr', 'PGR083G1137' => 'pgr', 'PGR083G1364' => 'pgr', 'PGSC0003DMG400003381' => 'stu', 'PGSC0003DMG400003417' => 'stu', 'PGSC0003DMG400008981' => 'stu', 'PGSC0003DMG400012417' => 'stu', 'PGSC0003DMG400012823' => 'stu', 'PGSC0003DMG400016885' => 'stu', 'PGSC0003DMG400022812' => 'stu', 'PGSC0003DMG400029726' => 'stu', 'PGSC0003DMG401009243' => 'stu', 'PGSC0003DMG401031505' => 'stu', 'PGSC0003DMG402031505' => 'stu', 'Phvul.001G017600' => 'pvu', 'Phvul.002G193500' => 'pvu', 'Phvul.002G228900' => 'pvu', 'Phvul.002G236800' => 'pvu', 'Phvul.003G049500' => 'pvu', 'Phvul.005G072000' => 'pvu', 'Phvul.006G164800' => 'pvu', 'Phvul.006G185100' => 'pvu', 'Phvul.007G090000' => 'pvu', 'Potri.001G399800' => 'ptr', 'Potri.002G149900' => 'ptr', 'Potri.004G044100' => 'ptr', 'Potri.004G177600' => 'ptr', 'Potri.009G138000' => 'ptr', 'Potri.010G094000' => 'ptr', 'Potri.011G053000' => 'ptr', 'Potri.011G119300' => 'ptr', 'Potri.013G113700' => 'ptr', 'Potri.018G107800' => 'ptr', 'Potri.019G084100' => 'ptr', 'Pp3c14_23720' => 'ppa', 'Pp3c16_6340' => 'ppa', 'Pp3c23_13420' => 'ppa', 'Pp3c24_2740' => 'ppa', 'Pp3c25_860' => 'ppa', 'Pp3c8_21750' => 'ppa', 'Prupe.1G273000' => 'ppe', 'Prupe.1G273700' => 'ppe', 'Prupe.1G274100' => 'ppe', 'Prupe.2G023300' => 'ppe', 'Prupe.4G048000' => 'ppe', 'Prupe.4G080400' => 'ppe', 'Prupe.4G181200' => 'ppe', 'Prupe.8G056900' => 'ppe', 'Prupe.8G168700' => 'ppe', 'Psat1g189080' => 'psa', 'Psat1g204760' => 'psa', 'Psat4g175560' => 'psa', 'Psat4g177720' => 'psa', 'Psat5g244240' => 'psa', 'Psat6g010720' => 'psa', 'Psat6g187200' => 'psa', 'Psat7g072040' => 'psa', 'PSO017G3501' => 'pso', 'PSO063G2148' => 'pso', 'PSO063G5608' => 'pso', 'PSO210G6392' => 'pso', 'PSO541G2319' => 'pso', 'PSO541G2836' => 'pso', 'PSO541G4012' => 'pso', 'PSO541G6253' => 'pso', 'PSO675G0580' => 'pso', 'PSO675G0856' => 'pso', 'PSO675G5635' => 'pso', 'PSO675G9157' => 'pso', 'PSO832G1660' => 'pso', 'PSO832G1969' => 'pso', 'QL02p007186' => 'qlo', 'QL02p033904' => 'qlo', 'QL03p064391' => 'qlo', 'QL05p040593' => 'qlo', 'QL05p058242' => 'qlo', 'QL08p021825' => 'qlo', 'QL11p004981' => 'qlo', 'RcHm_v2.0_Chr1g0318301' => 'rch', 'RcHm_v2.0_Chr4g0418501' => 'rch', 'RcHm_v2.0_Chr4g0439971' => 'rch', 'RcHm_v2.0_Chr5g0008541' => 'rch', 'RcHm_v2.0_Chr5g0014101' => 'rch', 'RcHm_v2.0_Chr5g0014131' => 'rch', 'RcHm_v2.0_Chr5g0033621' => 'rch', 'RcHm_v2.0_Chr6g0272041' => 'rch', 'RcHm_v2.0_Chr6g0278831' => 'rch', 'Rhsim02G0130400' => 'rsi', 'Rhsim02G0171100' => 'rsi', 'Rhsim05G0053000' => 'rsi', 'Rhsim05G0053100' => 'rsi', 'Rhsim06G0096500' => 'rsi', 'Rhsim06G0096600' => 'rsi', 'Rhsim06G0199100' => 'rsi', 'Rhsim12G0062300' => 'rsi', 'Rhsim12G0062800' => 'rsi', 'Sabra02G0118600' => 'sbr', 'Sabra04G0027300' => 'sbr', 'Sabra04G0119500' => 'sbr', 'Sabra08G0112500' => 'sbr', 'Sabra11G0036800' => 'sbr', 'Sabra11G0103800' => 'sbr', 'Sabra13G0096300' => 'sbr', 'Sabra16G0262300' => 'sbr', 'Sabra18G0091700' => 'sbr', 'Sabra19G0095400' => 'sbr', 'SalBow6G3080' => 'sbo', 'SalBow7G1157' => 'sbo', 'SalBow7G2123' => 'sbo', 'SalBow7G2285' => 'sbo', 'SalBow7G3537' => 'sbo', 'SalBow8G2947' => 'sbo', 'SalBow8G4463' => 'sbo', 'SalBow8G5466' => 'sbo', 'Sc01g0001750' => 'sci', 'Sc02g0006640' => 'sci', 'Sc02g0006670' => 'sci', 'Sc04g0008220' => 'sci', 'Sc05g0006190' => 'sci', 'Sc08g0002760' => 'sci', 'Sc17g0006170' => 'sci', 'Sc22g0002050' => 'sci', 'Sc23g0001190' => 'sci', 'Sc24g0000980' => 'sci', 'Sed0006245' => 'sed', 'Sed0007543' => 'sed', 'Sed0009411' => 'sed', 'Sed0010765' => 'sed', 'Sed0012944' => 'sed', 'Sed0014682' => 'sed', 'Sed0016174' => 'sed', 'Sed0016796' => 'sed', 'Sed0020317' => 'sed', 'Sed0021467' => 'sed', 'SEGI_01316' => 'sgi', 'SEGI_03374' => 'sgi', 'SEGI_16265' => 'sgi', 'SEGI_18569' => 'sgi', 'SEGI_20351' => 'sgi', 'SEGI_26395' => 'sgi', 'SEGI_29469' => 'sgi', 'SEGI_34771' => 'sgi', 'SEGI_36769' => 'sgi', 'SEGI_37139' => 'sgi', 'SGA_v2.0_scaffold100G29687' => 'sas', 'SGA_v2.0_scaffold118G32472' => 'sas', 'SGA_v2.0_scaffold14G07051' => 'sas', 'SGA_v2.0_scaffold183G39845' => 'sas', 'SGA_v2.0_scaffold1G00174' => 'sas', 'SGA_v2.0_scaffold22G09714' => 'sas', 'SGA_v2.0_scaffold333G48992' => 'sas', 'SGA_v2.0_scaffold46G17491' => 'sas', 'SGA_v2.0_scaffold49G18294' => 'sas', 'SGA_v2.0_scaffold63G21658' => 'sas', 'SHI01741' => 'shi', 'SHI05771' => 'shi', 'SHI18077' => 'shi', 'SHI20525' => 'shi', 'SHI20527' => 'shi', 'SHI20528' => 'shi', 'SMO172G0185' => 'smo', 'SMO198G0020' => 'smo', 'SMO351G0006' => 'smo', 'SMO356G0118' => 'smo', 'SMO358G0296' => 'smo', 'SMO367G0079' => 'smo', 'SMO367G1277' => 'smo', 'Solyc01g014220.3' => 'sly', 'Solyc01g111770.2' => 'sly', 'Solyc02g078180.3' => 'sly', 'Solyc03g006430.3' => 'sly', 'Solyc03g006456.1' => 'sly', 'Solyc03g079860.2' => 'sly', 'Solyc04g079770.3' => 'sly', 'Solyc05g007430.4' => 'sly', 'Solyc07g063150.3' => 'sly', 'Solyc08g016620.3' => 'sly', 'Solyc09g057590.3' => 'sly', 'Solyc09g057600.1' => 'sly', 'Solyc10g009050.3' => 'sly', 'Solyc11g017420.2' => 'sly', 'Sopen01g053810' => 'spe', 'Sopen02g023040' => 'spe', 'Sopen03g002440' => 'spe', 'Sopen04g033350' => 'spe', 'Sopen05g003310' => 'spe', 'Sopen07g004050' => 'spe', 'Sopen07g031340' => 'spe', 'Sopen08g006990' => 'spe', 'Sopen10g004830' => 'spe', 'Sopen11g009370' => 'spe', 'Sp1g24450' => 'spa', 'Sp1g29670' => 'spa', 'Sp1g39600' => 'spa', 'Sp2g11080' => 'spa', 'Sp2g13970' => 'spa', 'Sp4g16130' => 'spa', 'Sp6g13080' => 'spa', 'Sp7g37270' => 'spa', 'TAR371G0065' => 'tar', 'TAR376G0340' => 'tar', 'TAR376G0435' => 'tar', 'TAR381G0002' => 'tar', 'TAR381G1236' => 'tar', 'TAR624G0055' => 'tar', 'TAR624G0324' => 'tar', 'TAR624G0696' => 'tar', 'TAR624G0906' => 'tar', 'TAR625G0107' => 'tar', 'TAR626G0015' => 'tar', 'TAR626G1356' => 'tar', 'TAR627G0888' => 'tar', 'TAR628G0399' => 'tar', 'TAR628G1327' => 'tar', 'TAR629G2831' => 'tar', 'TAR629G2874' => 'tar', 'TAR633G1432' => 'tar', 'TAR633G2771' => 'tar', 'THA.LOC104803394' => 'tha', 'THA.LOC104805153' => 'tha', 'THA.LOC104806784' => 'tha', 'THA.LOC104810473' => 'tha', 'THA.LOC104813100' => 'tha', 'THA.LOC104814215' => 'tha', 'THA.LOC104815554' => 'tha', 'THA.LOC104820544' => 'tha', 'THA.LOC104824754' => 'tha', 'THA.LOC104827717' => 'tha', 'Thecc.02G031400' => 'tca', 'Thecc.02G055900' => 'tca', 'Thecc.02G350800' => 'tca', 'Thecc.06G150900' => 'tca', 'Thecc.06G186600' => 'tca', 'Thecc.07G089600' => 'tca', 'Thecc.08G020400' => 'tca', 'Thecc.08G182100' => 'tca', 'Thhalv10000873m.g' => 'esa', 'Thhalv10004185m.g' => 'esa', 'Thhalv10006981m.g' => 'esa', 'Thhalv10007204m.g' => 'esa', 'Thhalv10011374m.g' => 'esa', 'Thhalv10013482m.g' => 'esa', 'Thhalv10017801m.g' => 'esa', 'Thhalv10024983m.g' => 'esa', 'TPR.G12072' => 'tpr', 'TPR.G15769' => 'tpr', 'TPR.G16504' => 'tpr', 'TPR.G16506' => 'tpr', 'TPR.G24345' => 'tpr', 'TPR.G26666' => 'tpr', 'TPR.G27320' => 'tpr', 'TPR.G31819' => 'tpr', 'TPR.G38879' => 'tpr', 'TPR.G39015' => 'tpr', 'TPR.G8819' => 'tpr', 'TWI09G0924' => 'twi', 'TWI12G0811' => 'twi', 'TWI12G1294' => 'twi', 'TWI31G0150' => 'twi', 'TWI36G1262' => 'twi', 'TWI38G1287' => 'twi', 'TWI38G1633' => 'twi', 'TWI38G1982' => 'twi', 'TWI39G0116' => 'twi', 'TWI60G1011' => 'twi', 'TWI63G0171' => 'twi', 'TWI73G0839' => 'twi', 'TWI79G1511' => 'twi', 'unitig_0.g915' => 'ugi', 'unitig_0.g916' => 'ugi', 'unitig_21.g20219' => 'ugi', 'unitig_21.g20416' => 'ugi', 'unitig_578.g16132' => 'ugi', 'unitig_578.g16718' => 'ugi', 'unitig_62.g23481' => 'ugi', 'unitig_744.g24535' => 'ugi', 'unitig_749.g13525' => 'ugi', 'vmacro01248' => 'vma', 'vmacro02290' => 'vma', 'vmacro10946' => 'vma', 'vmacro11865' => 'vma', 'vmacro12493' => 'vma', 'vmacro17322' => 'vma', 'vmacro21599' => 'vma', 'vmacro23041' => 'vma', 'VMungo0251G0004' => 'vmu', 'VMungo0251G2639' => 'vmu', 'VMungo0251G2967' => 'vmu', 'VMungo0540G0864' => 'vmu', 'VMungo0540G1569' => 'vmu', 'VMungo0647G0317' => 'vmu', 'VMungo0720G1373' => 'vmu', 'VMungo0720G1508' => 'vmu', 'VMungo1080G0485' => 'vmu', 'VMungo1215G3177' => 'vmu', 'Zm00001eb112600' => 'zma', 'Zm00001eb120220' => 'zma', 'Zm00001eb153240' => 'zma', 'Zm00001eb168880' => 'zma', 'Zm00001eb213920' => 'zma', 'Zm00001eb228280' => 'zma', 'Zm00001eb254580' => 'zma', 'Zm00001eb272180' => 'zma', 'Zm00001eb293190' => 'zma', 'Zm00001eb322930' => 'zma', 'Zm00001eb353360' => 'zma', 'Zm00001eb353390' => 'zma', 'Zm00001eb353430' => 'zma', 'Zm00001eb353440' => 'zma', 'Zm00001eb353780' => 'zma' ) $gf_id = 'HOM05D000499' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000499' ) $data_identifier = 'HOM05D000499' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 29, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 12, 'amhyb' => (int) 8, 'aly' => (int) 12, 'aox' => (int) 9, 'arhy' => (int) 26, 'ath' => (int) 8, 'atr' => (int) 7, 'acertr' => (int) 10, 'cqu' => (int) 15, 'bca' => (int) 29, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 11, 'cansat' => (int) 8, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 9, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 8, 'cpa' => (int) 10, 'csa' => (int) 7, 'camsi' => (int) 20, 'dca' => (int) 8, 'din' => (int) 12, 'dzi' => (int) 14, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 6, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 38, 'gra' => (int) 16, 'vvi' => (int) 8, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 5, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 11, 'lja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 11, 'mpo' => (int) 3, 'mbi' => (int) 14, 'mdo' => (int) 14, 'mtr' => (int) 8, 'cme' => (int) 9, 'egut' => (int) 9, 'ama' => (int) 11, 'nta' => (int) 17, 'nnu' => (int) 11, 'oeu' => (int) 18, 'osa' => (int) 8, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 6, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 9, 'rsi' => (int) 9, 'sbr' => (int) 10, 'sbo' => (int) 8, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 10, 'sas' => (int) 10, 'shi' => (int) 6, 'smo' => (int) 7, 'sly' => (int) 14, 'spe' => (int) 10, 'spa' => (int) 8, 'tar' => (int) 19, 'tha' => (int) 10, 'tca' => (int) 8, 'esa' => (int) 8, 'tpr' => (int) 11, 'twi' => (int) 13, 'ugi' => (int) 9, 'vma' => (int) 8, 'vmu' => (int) 10, 'zma' => (int) 15 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb353780' $species_info = array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ) $local_species = 'oeu' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000499', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1066', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p29780' => 'bna', 'A02p33180' => 'bna', 'A03p16470' => 'bna', 'A03p66010' => 'bna', 'A04p25970' => 'bna', 'A06p01270' => 'bna', 'A06p46080' => 'bna', 'A07p11400' => 'bna', 'A08p01840' => 'bna', 'A08p08230' => 'bna', 'A08p25740' => 'bna', 'A09p32070' => 'bna', 'A09p37830' => 'bna', 'A09p42840' => 'bna', 'A09p42850' => 'bna', 'Aa31LG10G2060' => 'aar', 'Aa31LG2G7410' => 'aar', 'Aa31LG6G10200' => 'aar', 'Aa31LG6G16680' => 'aar', 'Aa31LG6G8470' => 'aar', 'Aa31LG9G12730' => 'aar', 'Aa31LG9G13680' => 'aar', 'Aa31LG9G14920' => 'aar', 'Aa31LG9G6650' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4977' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5467' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3254' => 'aag', 'Actinidia02578' => 'ach', 'Actinidia07693' => 'ach', 'Actinidia08413' => 'ach', 'Actinidia08414' => 'ach', 'Actinidia15289' => 'ach', 'Actinidia19871' => 'ach', 'Actinidia21475' => 'ach', 'Actinidia22576' => 'ach', 'Actinidia28327' => 'ach', 'Actinidia32491' => 'ach', 'Actinidia39463' => 'ach', 'Actinidia39571' => 'ach', 'Ah.01g013750' => 'amhyb', 'Ah.01g023210' => 'amhyb', 'Ah.04g164850' => 'amhyb', 'Ah.05g178060' => 'amhyb', 'Ah.07g204270' => 'amhyb', 'Ah.07g208480' => 'amhyb', 'Ah.09g237410' => 'amhyb', 'Ah.14g089460' => 'amhyb', 'AL1G41790' => 'aly', 'AL1G49050' => 'aly', 'AL1G53810' => 'aly', 'AL1G61400' => 'aly', 'AL4G18580' => 'aly', 'AL5G12510' => 'aly', 'AL5G12540' => 'aly', 'AL6G43230' => 'aly', 'AL7G10370' => 'aly', 'AL7G19250' => 'aly', 'AL8G12240' => 'aly', 'AL8G18540' => 'aly', 'Aqoxy1G02409' => 'aox', 'Aqoxy2G03993' => 'aox', 'Aqoxy3G03357' => 'aox', 'Aqoxy4G00785' => 'aox', 'Aqoxy5G02598' => 'aox', 'Aqoxy6G00132' => 'aox', 'Aqoxy7G01776' => 'aox', 'Aqoxy7G02316' => 'aox', 'Aqoxy7G03973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.12AFKW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B8730' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27IQR1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3F75VG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3RE0GA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41TCQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.527VTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FIR39' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5W8UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DA38EV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ63HS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H1I32C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HC27T5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4M8AP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7N3CZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9UVDZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LS1NQA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT1D4B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SKC4TM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCFV76' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF9Q1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQWD9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1ZM88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WE07RT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YCK7VH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJE6Q6' => 'arhy', 'AT1G28240' => 'ath', 'AT1G34550' => 'ath', 'AT1G53040' => 'ath', 'AT2G02910' => 'ath', 'AT4G09630' => 'ath', 'AT4G38500' => 'ath', 'AT5G42660' => 'ath', 'AT5G46220' => 'ath', 'ATR0152G026' => 'atr', 'ATR0564G343' => 'atr', 'ATR0706G151' => 'atr', 'ATR0733G207' => 'atr', 'ATR0751G234' => 'atr', 'ATR0807G048' => 'atr', 'ATR1091G084' => 'atr', 'Atru.chr10.1229' => 'acertr', 'Atru.chr10.1230' => 'acertr', 'Atru.chr10.1874' => 'acertr', 'Atru.chr11.1808' => 'acertr', 'Atru.chr13.1795' => 'acertr', 'Atru.chr13.570' => 'acertr', 'Atru.chr2.2608' => 'acertr', 'Atru.chr2.2609' => 'acertr', 'Atru.chr5.3428' => 'acertr', 'Atru.chr8.1171' => 'acertr', 'AUR62004651' => 'cqu', 'AUR62008675' => 'cqu', 'AUR62010014' => 'cqu', 'AUR62013004' => 'cqu', 'AUR62014825' => 'cqu', 'AUR62015015' => 'cqu', 'AUR62015151' => 'cqu', 'AUR62017020' => 'cqu', 'AUR62019422' => 'cqu', 'AUR62023570' => 'cqu', 'AUR62025571' => 'cqu', 'AUR62029098' => 'cqu', 'AUR62033863' => 'cqu', 'AUR62034296' => 'cqu', 'AUR62040075' => 'cqu', 'BcaB02g07334' => 'bca', 'BcaB02g10575' => 'bca', 'BcaB03g12119' => 'bca', 'BcaB03g12120' => 'bca', 'BcaB03g13945' => 'bca', 'BcaB04g17123' => 'bca', 'BcaB04g17867' => 'bca', 'BcaB04g19839' => 'bca', 'BcaB07g30317' => 'bca', 'BcaB07g32432' => 'bca', 'BcaB07g33362' => 'bca', 'BcaB08g36611' => 'bca', 'BcaC01g00028' => 'bca', 'BcaC01g01356' => 'bca', 'BcaC01g02034' => 'bca', 'BcaC01g06051' => 'bca', 'BcaC03g16839' => 'bca', 'BcaC03g17176' => 'bca', 'BcaC05g26829' => 'bca', 'BcaC06g31490' => 'bca', 'BcaC06g35344' => 'bca', 'BcaC06g36570' => 'bca', 'BcaC07g37537' => 'bca', 'BcaC08g43491' => 'bca', 'BcaC08g43773' => 'bca', 'BcaNung00234' => 'bca', 'BcaNung01982' => 'bca', 'BcaNung03707' => 'bca', 'BcaNung06454' => 'bca', 'BolC2t10762H' => 'bol', 'BolC2t11191H' => 'bol', 'BolC3t14322H' => 'bol', 'BolC3t19747H' => 'bol', 'BolC3t21425H' => 'bol', 'BolC4t27800H' => 'bol', 'BolC5t31423H' => 'bol', 'BolC6t35951H' => 'bol', 'BolC6t36282H' => 'bol', 'BolC7t40678H' => 'bol', 'BolC7t40679H' => 'bol', 'BolC7t42222H' => 'bol', 'BolC7t43492H' => 'bol', 'BolC7t46785H' => 'bol', 'BolC8t47853H' => 'bol', 'BolC9t56805H' => 'bol', 'BraA02t08000Z' => 'bra', 'BraA02t08341Z' => 'bra', 'BraA03t10936Z' => 'bra', 'BraA03t15657Z' => 'bra', 'BraA04t18100Z' => 'bra', 'BraA05t20523Z' => 'bra', 'BraA06t23353Z' => 'bra', 'BraA06t27473Z' => 'bra', 'BraA06t27769Z' => 'bra', 'BraA07t28928Z' => 'bra', 'BraA08t32236Z' => 'bra', 'BraA08t32841Z' => 'bra', 'BraA08t34524Z' => 'bra', 'BraA09t38742Z' => 'bra', 'BraA09t39295Z' => 'bra', 'C02p47180' => 'bna', 'C02p50990' => 'bna', 'C03p19360' => 'bna', 'C03p74950' => 'bna', 'C03p91000' => 'bna', 'C04p63260' => 'bna', 'C05p27050' => 'bna', 'C06p08750' => 'bna', 'C06p11490' => 'bna', 'C07p02820' => 'bna', 'C07p17180' => 'bna', 'C07p29440' => 'bna', 'C07p63730' => 'bna', 'C09p39260' => 'bna', 'CAN.G1164.34' => 'can', 'CAN.G1164.39' => 'can', 'CAN.G1530.3' => 'can', 'CAN.G162.61' => 'can', 'CAN.G176.6' => 'can', 'CAN.G289.49' => 'can', 'CAN.G370.21' => 'can', 'CAN.G370.22' => 'can', 'CAN.G371.117' => 'can', 'CAN.G58.37' => 'can', 'CAN.G588.98' => 'can', 'CANSAT21G2266' => 'cansat', 'CANSAT25G2799' => 'cansat', 'CANSAT35G0862' => 'cansat', 'CANSAT35G1704' => 'cansat', 'CANSAT35G1760' => 'cansat', 'CANSAT56G3971' => 'cansat', 'CANSAT56G4116' => 'cansat', 'CANSAT80G1259' => 'cansat', 'CARHR027730' => 'chi', 'CARHR033880' => 'chi', 'CARHR043270' => 'chi', 'CARHR145330' => 'chi', 'CARHR145340' => 'chi', 'CARHR175570' => 'chi', 'CARHR181570' => 'chi', 'CARHR258470' => 'chi', 'CARHR260490' => 'chi', 'CARHR294220' => 'chi', 'Carub.0001s2668' => 'cru', 'Carub.0001s3257' => 'cru', 'Carub.0001s4220' => 'cru', 'Carub.0005s0179' => 'cru', 'Carub.0006s2807' => 'cru', 'Carub.0007s0039' => 'cru', 'Carub.0008s0169' => 'cru', 'Carub.0008s0636' => 'cru', 'Ca_00338_v3' => 'car', 'Ca_00542_v3' => 'car', 'Ca_01844_v3' => 'car', 'Ca_10611_v3' => 'car', 'Ca_13326_v3' => 'car', 'Ca_17944_v3' => 'car', 'Ca_18546_v3' => 'car', 'Ca_24219_v3' => 'car', 'Ca_29972_v3' => 'car', 'CBR_g3681' => 'cbr', 'CBR_g40021' => 'cbr', 'Cc01_g08140' => 'ccan', 'Cc02_g13410' => 'ccan', 'Cc02_g37480' => 'ccan', 'Cc05_g12030' => 'ccan', 'Cc09_g03370' => 'ccan', 'Cc09_g10300' => 'ccan', 'Cc10_g03530' => 'ccan', 'Cc10_g11380' => 'ccan', 'CDE01G0176' => 'cde', 'CDE02G0675' => 'cde', 'CDE02G0942' => 'cde', 'CDE02G1153' => 'cde', 'CDE02G4177' => 'cde', 'CDE04G2117' => 'cde', 'CDE04G2736' => 'cde', 'CDE08G1161' => 'cde', 'CDE09G1238' => 'cde', 'Cfa000467' => 'cfa', 'Cfa000947' => 'cfa', 'Cfa004969' => 'cfa', 'Cfa005284' => 'cfa', 'Cfa008993' => 'cfa', 'Cfa018187' => 'cfa', 'Cfa018454' => 'cfa', 'Cfa020585' => 'cfa', 'Ciclev10000424m.g' => 'ccl', 'Ciclev10003605m.g' => 'ccl', 'Ciclev10007828m.g' => 'ccl', 'Ciclev10014620m.g' => 'ccl', 'Ciclev10015169m.g' => 'ccl', 'Ciclev10018291m.g' => 'ccl', 'Ciclev10028256m.g' => 'ccl', 'Ciclev10033822m.g' => 'ccl', 'CiPaw.05G060300' => 'cil', 'CiPaw.05G085000' => 'cil', 'CiPaw.06G083700' => 'cil', 'CiPaw.06G120300' => 'cil', 'CiPaw.09G060500' => 'cil', 'CiPaw.09G123800' => 'cil', 'CiPaw.11G169700' => 'cil', 'CiPaw.12G118300' => 'cil', 'CiPaw.15G071000' => 'cil', 'CiPaw.15G081900' => 'cil', 'ClCG01G024610' => 'cla', 'ClCG03G006070' => 'cla', 'ClCG05G019250' => 'cla', 'ClCG09G009500' => 'cla', 'ClCG11G008200' => 'cla', 'ClCG11G018080' => 'cla', 'COL.COLO4_17373' => 'col', 'COL.COLO4_22994' => 'col', 'COL.COLO4_26389' => 'col', 'COL.COLO4_27170' => 'col', 'COL.COLO4_31074' => 'col', 'COL.COLO4_31465' => 'col', 'COL.COLO4_36438' => 'col', 'COL.COLO4_36439' => 'col', 'Cpa.g.c38781' => 'cpa', 'Cpa.g.sc128.12' => 'cpa', 'Cpa.g.sc166.7' => 'cpa', 'Cpa.g.sc166.8' => 'cpa', 'Cpa.g.sc20.111' => 'cpa', 'Cpa.g.sc27.31' => 'cpa', 'Cpa.g.sc64.36' => 'cpa', 'Cpa.g.sc64.37' => 'cpa', 'Cpa.g.sc66.49' => 'cpa', 'Cpa.g.sc80.64' => 'cpa', 'CsaV3_1G012320' => 'csa', 'CsaV3_2G008480' => 'csa', 'CsaV3_2G033450' => 'csa', 'CsaV3_3G044830' => 'csa', 'CsaV3_4G033710' => 'csa', 'CsaV3_6G051730' => 'csa', 'CsaV3_7G025350' => 'csa', 'CSS0001067' => 'camsi', 'CSS0005996' => 'camsi', 'CSS0006590' => 'camsi', 'CSS0009673' => 'camsi', 'CSS0010201' => 'camsi', 'CSS0010549' => 'camsi', 'CSS0011364' => 'camsi', 'CSS0014473' => 'camsi', 'CSS0014961' => 'camsi', 'CSS0020191' => 'camsi', 'CSS0021165' => 'camsi', 'CSS0022306' => 'camsi', 'CSS0030591' => 'camsi', 'CSS0030696' => 'camsi', 'CSS0032653' => 'camsi', 'CSS0037487' => 'camsi', 'CSS0041102' => 'camsi', 'CSS0041261' => 'camsi', 'CSS0046246' => 'camsi', 'CSS0049256' => 'camsi', 'DCAR_004075' => 'dca', 'DCAR_011538' => 'dca', 'DCAR_019553' => 'dca', 'DCAR_020952' => 'dca', 'DCAR_021739' => 'dca', 'DCAR_027407' => 'dca', 'DCAR_027913' => 'dca', 'DCAR_028066' => 'dca', 'Dinv05899' => 'din', 'Dinv07563' => 'din', 'Dinv08010' => 'din', 'Dinv14125' => 'din', 'Dinv20172' => 'din', 'Dinv30743' => 'din', 'Dinv31229' => 'din', 'Dinv34162' => 'din', 'Dinv36028' => 'din', 'Dinv39368' => 'din', 'Dinv40565' => 'din', 'Dinv41706' => 'din', 'Duzib052G0089' => 'dzi', 'Duzib116G0641' => 'dzi', 'Duzib132G0069' => 'dzi', 'Duzib132G1219' => 'dzi', 'Duzib147G0278' => 'dzi', 'Duzib160G0480' => 'dzi', 'Duzib170G0661' => 'dzi', 'Duzib177G0591' => 'dzi', 'Duzib187G1353' => 'dzi', 'Duzib192G0858' => 'dzi', 'Duzib192G0883' => 'dzi', 'Duzib213G0506' => 'dzi', 'Duzib235G0289' => 'dzi', 'Duzib251G0422' => 'dzi', 'ECA232G3898' => 'eca', 'ECA233G5950' => 'eca', 'ECA234G1699' => 'eca', 'ECA234G2421' => 'eca', 'ECA236G0426' => 'eca', 'ECA236G4331' => 'eca', 'ECA248G2573' => 'eca', 'EL10Ac1g00077' => 'bvu', 'EL10Ac1g01746' => 'bvu', 'EL10Ac2g03464' => 'bvu', 'EL10Ac4g08176' => 'bvu', 'EL10Ac7g17521' => 'bvu', 'EL10Ac8g20386' => 'bvu', 'EL10Ac9g21343' => 'bvu', 'EL10Ac9g22688' => 'bvu', 'Eucgr.B03434' => 'egr', 'Eucgr.D00618' => 'egr', 'Eucgr.E02395' => 'egr', 'Eucgr.F01129' => 'egr', 'Eucgr.F02622' => 'egr', 'Eucgr.F04207' => 'egr', 'FAN01G0570' => 'fan', 'FAN03G3351' => 'fan', 'FAN06G3702' => 'fan', 'FAN07G2149' => 'fan', 'FAN10G3758' => 'fan', 'FAN11G1170' => 'fan', 'FAN11G2050' => 'fan', 'FAN11G2724' => 'fan', 'FAN12G1700' => 'fan', 'FAN12G2028' => 'fan', 'FAN15G1160' => 'fan', 'FAN15G3063' => 'fan', 'FAN16G2540' => 'fan', 'FAN16G3077' => 'fan', 'FAN16G3624' => 'fan', 'FAN17G0221' => 'fan', 'FAN20G2492' => 'fan', 'FAN20G2905' => 'fan', 'FAN21G0548' => 'fan', 'FAN21G1300' => 'fan', 'FAN22G0077' => 'fan', 'FAN22G1315' => 'fan', 'FAN24G1280' => 'fan', 'FAN24G1445' => 'fan', 'FAN24G3527' => 'fan', 'FAN25G0464' => 'fan', 'FAN25G2885' => 'fan', 'FAN25G3270' => 'fan', 'FAN27G1101' => 'fan', 'FAN27G2846' => 'fan', 'FAN27G3524' => 'fan', 'FvH4_2g11770' => 'fve', 'FvH4_2g15630' => 'fve', 'FvH4_3g05570' => 'fve', 'FvH4_3g09110' => 'fve', 'FvH4_3g19940' => 'fve', 'FvH4_4g04821' => 'fve', 'FvH4_4g31480' => 'fve', 'FvH4_7g01740' => 'fve', 'Glyma.05G130400' => 'gma', 'Glyma.05G156400' => 'gma', 'Glyma.07G197000' => 'gma', 'Glyma.08G085151' => 'gma', 'Glyma.08G114500' => 'gma', 'Glyma.08G300400' => 'gma', 'Glyma.10G215800' => 'gma', 'Glyma.12G224400' => 'gma', 'Glyma.13G179300' => 'gma', 'Glyma.13G218151' => 'gma', 'Glyma.13G238800' => 'gma', 'Glyma.13G276900' => 'gma', 'Glyma.14G078200' => 'gma', 'Glyma.15G074500' => 'gma', 'Glyma.15G094100' => 'gma', 'Glyma.17G247200' => 'gma', 'Glyma.18G120100' => 'gma', 'Glyma.20G176000' => 'gma', 'Gohir.A01G063600' => 'ghi', 'Gohir.A01G170301' => 'ghi', 'Gohir.A02G060500' => 'ghi', 'Gohir.A05G133850' => 'ghi', 'Gohir.A05G161400' => 'ghi', 'Gohir.A06G012900' => 'ghi', 'Gohir.A06G035901' => 'ghi', 'Gohir.A06G127100' => 'ghi', 'Gohir.A06G210500' => 'ghi', 'Gohir.A08G008650' => 'ghi', 'Gohir.A09G072700' => 'ghi', 'Gohir.A09G088301' => 'ghi', 'Gohir.A10G040600' => 'ghi', 'Gohir.A12G036300' => 'ghi', 'Gohir.A12G143350' => 'ghi', 'Gohir.A12G165500' => 'ghi', 'Gohir.A13G145700' => 'ghi', 'Gohir.D01G050000' => 'ghi', 'Gohir.D01G051366' => 'ghi', 'Gohir.D01G161350' => 'ghi', 'Gohir.D02G065900' => 'ghi', 'Gohir.D05G164200' => 'ghi', 'Gohir.D05G355500' => 'ghi', 'Gohir.D06G010400' => 'ghi', 'Gohir.D06G111250' => 'ghi', 'Gohir.D06G132000' => 'ghi', 'Gohir.D06G210500' => 'ghi', 'Gohir.D07G165675' => 'ghi', 'Gohir.D08G062240' => 'ghi', 'Gohir.D08G086101' => 'ghi', 'Gohir.D08G138060' => 'ghi', 'Gohir.D09G072300' => 'ghi', 'Gohir.D10G041400' => 'ghi', 'Gohir.D11G191020' => 'ghi', 'Gohir.D11G212066' => 'ghi', 'Gohir.D12G036300' => 'ghi', 'Gohir.D12G168600' => 'ghi', 'Gohir.D13G150600' => 'ghi', 'Gorai.001G057300' => 'gra', 'Gorai.002G069900' => 'gra', 'Gorai.002G200000' => 'gra', 'Gorai.003G067600' => 'gra', 'Gorai.005G074800' => 'gra', 'Gorai.006G087300' => 'gra', 'Gorai.008G037500' => 'gra', 'Gorai.008G181400' => 'gra', 'Gorai.009G169400' => 'gra', 'Gorai.009G387900' => 'gra', 'Gorai.010G013300' => 'gra', 'Gorai.010G153800' => 'gra', 'Gorai.010G255800' => 'gra', 'Gorai.011G043700' => 'gra', 'Gorai.011G198900' => 'gra', 'Gorai.013G168400' => 'gra', 'GSVIVG01005212001' => 'vvi', 'GSVIVG01006163001' => 'vvi', 'GSVIVG01009625001' => 'vvi', 'GSVIVG01014338001' => 'vvi', 'GSVIVG01020005001' => 'vvi', 'GSVIVG01021450001' => 'vvi', 'GSVIVG01023975001' => 'vvi', 'GSVIVG01034490001' => 'vvi', 'HanXRQChr04g0112071' => 'han', 'HanXRQChr05g0131151' => 'han', 'HanXRQChr09g0262371' => 'han', 'HanXRQChr09g0268401' => 'han', 'HanXRQChr10g0279241' => 'han', 'HanXRQChr10g0297961' => 'han', 'HanXRQChr11g0326231' => 'han', 'HanXRQChr11g0328471' => 'han', 'HanXRQChr16g0507941' => 'han', 'HanXRQChr17g0560211' => 'han', 'Haze_02108' => 'cav', 'Haze_02428' => 'cav', 'Haze_05593' => 'cav', 'Haze_06448' => 'cav', 'Haze_09427' => 'cav', 'Haze_12022' => 'cav', 'Haze_17612' => 'cav', 'Haze_17928' => 'cav', 'Hma1.2p1_0032F.1_g019250' => 'hma', 'Hma1.2p1_0163F.1_g072690' => 'hma', 'Hma1.2p1_0265F.1_g106710' => 'hma', 'Hma1.2p1_0286F.1_g113970' => 'hma', 'Hma1.2p1_0363F.1_g136640' => 'hma', 'Hma1.2p1_0584F.1_g183470' => 'hma', 'Hma1.2p1_0885F.1_g232570' => 'hma', 'HPP92_006022' => 'vpl', 'HPP92_007320' => 'vpl', 'HPP92_011521' => 'vpl', 'HPP92_019387' => 'vpl', 'HPP92_024038' => 'vpl', 'Hund05891' => 'sun', 'Hund06450' => 'sun', 'Hund12053' => 'sun', 'Hund16800' => 'sun', 'Hund21222' => 'sun', 'Hund22896' => 'sun', 'Hund23746' => 'sun', 'Hund27083' => 'sun', 'Lalb_Chr02g0141831' => 'lal', 'Lalb_Chr02g0141841' => 'lal', 'Lalb_Chr05g0220411' => 'lal', 'Lalb_Chr06g0162081' => 'lal', 'Lalb_Chr09g0327651' => 'lal', 'Lalb_Chr13g0295051' => 'lal', 'Lalb_Chr15g0086801' => 'lal', 'Lalb_Chr16g0383781' => 'lal', 'Lalb_Chr16g0383791' => 'lal', 'Lalb_Chr18g0055441' => 'lal', 'Lalb_Chr18g0059611' => 'lal', 'Lalb_Chr20g0109661' => 'lal', 'Lalb_Chr20g0109831' => 'lal', 'Lalb_Chr20g0121871' => 'lal', 'Lalb_Chr22g0355361' => 'lal', 'Lalb_Chr25g0286371' => 'lal', 'Lj1A1187G43' => 'lonja', 'Lj1A1205T50' => 'lonja', 'Lj1A800G33' => 'lonja', 'Lj1C1187T7' => 'lonja', 'Lj1C843T11' => 'lonja', 'Lj1g0010940' => 'lja', 'Lj2A288T69' => 'lonja', 'Lj3g0024276' => 'lja', 'Lj4A47T76' => 'lonja', 'Lj4g0005805' => 'lja', 'Lj4g0006097' => 'lja', 'Lj4g0008528' => 'lja', 'Lj4g0024907' => 'lja', 'Lj5g0012472' => 'lja', 'Lj5g0018648' => 'lja', 'Lj6C789G1' => 'lonja', 'Lj6g0004000' => 'lja', 'Lj7A292G67' => 'lonja', 'Lj7A292T64' => 'lonja', 'Lj9A400T58' => 'lonja', 'Lsat_1_v5_gn_1_126181' => 'lsa', 'Lsat_1_v5_gn_4_123041' => 'lsa', 'Lsat_1_v5_gn_4_133620' => 'lsa', 'Lsat_1_v5_gn_4_53221' => 'lsa', 'Lsat_1_v5_gn_4_71961' => 'lsa', 'Lsat_1_v5_gn_7_105241' => 'lsa', 'Lsat_1_v5_gn_7_21361' => 'lsa', 'Lsat_1_v5_gn_7_28860' => 'lsa', 'Lsat_1_v5_gn_7_31260' => 'lsa', 'Lsat_1_v5_gn_8_52801' => 'lsa', 'Manes.02G191400' => 'mes', 'Manes.03G110100' => 'mes', 'Manes.04G071100' => 'mes', 'Manes.05G100500' => 'mes', 'Manes.05G164700' => 'mes', 'Manes.15G087000' => 'mes', 'Manes.15G121500' => 'mes', 'Manes.16G028300' => 'mes', 'Manes.17G046100' => 'mes', 'Manes.17G069800' => 'mes', 'Manes.18G100500' => 'mes', 'Mapoly0002s0109' => 'mpo', 'Mapoly0024s0007' => 'mpo', 'Mapoly0089s0032' => 'mpo', 'MBI04_g42241_MAGBIO' => 'mbi', 'MBI05_g11988_MAGBIO' => 'mbi', 'MBI05_g35452_MAGBIO' => 'mbi', 'MBI07_g30179_MAGBIO' => 'mbi', 'MBI07_g35859_MAGBIO' => 'mbi', 'MBI07_g35860_MAGBIO' => 'mbi', 'MBI07_g37166_MAGBIO' => 'mbi', 'MBI08_g18172_MAGBIO' => 'mbi', 'MBI09_g08441_MAGBIO' => 'mbi', 'MBI13_g01676_MAGBIO' => 'mbi', 'MBI14_g42955_MAGBIO' => 'mbi', 'MBI16_g13161_MAGBIO' => 'mbi', 'MBI17_g27204_MAGBIO' => 'mbi', 'MBI19_g21595_MAGBIO' => 'mbi', 'MD00G1148400' => 'mdo', 'MD02G1301200' => 'mdo', 'MD03G1227800' => 'mdo', 'MD05G1041100' => 'mdo', 'MD05G1124800' => 'mdo', 'MD05G1284000' => 'mdo', 'MD05G1338800' => 'mdo', 'MD05G1338900' => 'mdo', 'MD07G1022800' => 'mdo', 'MD10G1047500' => 'mdo', 'MD10G1127500' => 'mdo', 'MD10G1262300' => 'mdo', 'MD10G1293800' => 'mdo', 'MD16G1074300' => 'mdo', 'Medtr1g021670' => 'mtr', 'Medtr1g096320' => 'mtr', 'Medtr2g013690' => 'mtr', 'Medtr2g019450' => 'mtr', 'Medtr2g085170' => 'mtr', 'Medtr4g088785' => 'mtr', 'Medtr8g055930' => 'mtr', 'Medtr8g085850' => 'mtr', 'MELO3C002605.2' => 'cme', 'MELO3C003891.2' => 'cme', 'MELO3C004012.2' => 'cme', 'MELO3C007134.2' => 'cme', 'MELO3C008118.2' => 'cme', 'MELO3C016700.2' => 'cme', 'MELO3C024127.2' => 'cme', 'MELO3C033361.2' => 'cme', 'MELO3C033362.2' => 'cme', 'Migut.C00430' => 'egut', 'Migut.C01246' => 'egut', 'Migut.E00101' => 'egut', 'Migut.H01486' => 'egut', 'Migut.H01939' => 'egut', 'Migut.K00360' => 'egut', 'Migut.M00910' => 'egut', 'Migut.M01139' => 'egut', 'Migut.N02677' => 'egut', 'MSTRG.13252' => 'ama', 'MSTRG.14701' => 'ama', 'MSTRG.1521' => 'ama', 'MSTRG.15884' => 'ama', 'MSTRG.16242' => 'ama', 'MSTRG.22285' => 'ama', 'MSTRG.22444' => 'ama', 'MSTRG.2349' => 'ama', 'MSTRG.26308' => 'ama', 'MSTRG.28296' => 'ama', 'MSTRG.9895' => 'ama', 'Nitab4.5_0000110g0060' => 'nta', 'Nitab4.5_0000420g0130' => 'nta', 'Nitab4.5_0000422g0030' => 'nta', 'Nitab4.5_0000560g0180' => 'nta', 'Nitab4.5_0000703g0100' => 'nta', 'Nitab4.5_0000786g0200' => 'nta', 'Nitab4.5_0001336g0020' => 'nta', 'Nitab4.5_0001796g0030' => 'nta', 'Nitab4.5_0003348g0060' => 'nta', 'Nitab4.5_0003698g0040' => 'nta', 'Nitab4.5_0003942g0090' => 'nta', 'Nitab4.5_0004775g0070' => 'nta', 'Nitab4.5_0004864g0030' => 'nta', 'Nitab4.5_0005615g0020' => 'nta', 'Nitab4.5_0009288g0030' => 'nta', 'Nitab4.5_0009341g0010' => 'nta', 'Nitab4.5_0009535g0010' => 'nta', 'Nn1g03995' => 'nnu', 'Nn1g04100' => 'nnu', 'Nn1g06530' => 'nnu', 'Nn3g16404' => 'nnu', 'Nn3g17212' => 'nnu', 'Nn3g20776' => 'nnu', 'Nn3g21923' => 'nnu', 'Nn5g27737' => 'nnu', 'Nn5g29461' => 'nnu', 'Nn7g38355' => 'nnu', 'Nn8g39873' => 'nnu', 'Oeu000548.2' => 'oeu', 'Oeu004672.1' => 'oeu', 'Oeu015605.2' => 'oeu', 'Oeu016092.1' => 'oeu', 'Oeu017879.3' => 'oeu', 'Oeu024910.1' => 'oeu', 'Oeu028965.1' => 'oeu', 'Oeu031269.1' => 'oeu', 'Oeu031270.1' => 'oeu', 'Oeu032535.1' => 'oeu', 'Oeu034151.1' => 'oeu', 'Oeu034152.1' => 'oeu', 'Oeu034588.2' => 'oeu', 'Oeu050846.1' => 'oeu', 'Oeu050849.2' => 'oeu', 'Oeu051063.2' => 'oeu', 'Oeu052368.1' => 'oeu', 'Oeu052370.1' => 'oeu', 'Os01g0210400' => 'osa', 'Os01g0304300' => 'osa', 'Os01g0749100' => 'osa', 'Os02g0745800' => 'osa', 'Os03g0769050' => 'osa', 'Os05g0531500' => 'osa', 'Os06g0724300' => 'osa', 'Os11g0198100' => 'osa', 'Peaxi162Scf00069g01425' => 'pax', 'Peaxi162Scf00280g00811' => 'pax', 'Peaxi162Scf00310g00615' => 'pax', 'Peaxi162Scf00362g00542' => 'pax', 'Peaxi162Scf00461g00310' => 'pax', 'Peaxi162Scf00530g00118' => 'pax', 'Peaxi162Scf00541g00057' => 'pax', 'Peaxi162Scf00661g00017' => 'pax', 'Peaxi162Scf00926g00027' => 'pax', 'Peaxi162Scf01064g00263' => 'pax', 'Peaxi162Scf01211g00135' => 'pax', 'PGR004G2336' => 'pgr', 'PGR042G0327' => 'pgr', 'PGR042G1957' => 'pgr', 'PGR042G2003' => 'pgr', 'PGR042G3929' => 'pgr', 'PGR083G1137' => 'pgr', 'PGR083G1364' => 'pgr', 'PGSC0003DMG400003381' => 'stu', 'PGSC0003DMG400003417' => 'stu', 'PGSC0003DMG400008981' => 'stu', 'PGSC0003DMG400012417' => 'stu', 'PGSC0003DMG400012823' => 'stu', 'PGSC0003DMG400016885' => 'stu', 'PGSC0003DMG400022812' => 'stu', 'PGSC0003DMG400029726' => 'stu', 'PGSC0003DMG401009243' => 'stu', 'PGSC0003DMG401031505' => 'stu', 'PGSC0003DMG402031505' => 'stu', 'Phvul.001G017600' => 'pvu', 'Phvul.002G193500' => 'pvu', 'Phvul.002G228900' => 'pvu', 'Phvul.002G236800' => 'pvu', 'Phvul.003G049500' => 'pvu', 'Phvul.005G072000' => 'pvu', 'Phvul.006G164800' => 'pvu', 'Phvul.006G185100' => 'pvu', 'Phvul.007G090000' => 'pvu', 'Potri.001G399800' => 'ptr', 'Potri.002G149900' => 'ptr', 'Potri.004G044100' => 'ptr', 'Potri.004G177600' => 'ptr', 'Potri.009G138000' => 'ptr', 'Potri.010G094000' => 'ptr', 'Potri.011G053000' => 'ptr', 'Potri.011G119300' => 'ptr', 'Potri.013G113700' => 'ptr', 'Potri.018G107800' => 'ptr', 'Potri.019G084100' => 'ptr', 'Pp3c14_23720' => 'ppa', 'Pp3c16_6340' => 'ppa', 'Pp3c23_13420' => 'ppa', 'Pp3c24_2740' => 'ppa', 'Pp3c25_860' => 'ppa', 'Pp3c8_21750' => 'ppa', 'Prupe.1G273000' => 'ppe', 'Prupe.1G273700' => 'ppe', 'Prupe.1G274100' => 'ppe', 'Prupe.2G023300' => 'ppe', 'Prupe.4G048000' => 'ppe', 'Prupe.4G080400' => 'ppe', 'Prupe.4G181200' => 'ppe', 'Prupe.8G056900' => 'ppe', 'Prupe.8G168700' => 'ppe', 'Psat1g189080' => 'psa', 'Psat1g204760' => 'psa', 'Psat4g175560' => 'psa', 'Psat4g177720' => 'psa', 'Psat5g244240' => 'psa', 'Psat6g010720' => 'psa', 'Psat6g187200' => 'psa', 'Psat7g072040' => 'psa', 'PSO017G3501' => 'pso', 'PSO063G2148' => 'pso', 'PSO063G5608' => 'pso', 'PSO210G6392' => 'pso', 'PSO541G2319' => 'pso', 'PSO541G2836' => 'pso', 'PSO541G4012' => 'pso', 'PSO541G6253' => 'pso', 'PSO675G0580' => 'pso', 'PSO675G0856' => 'pso', 'PSO675G5635' => 'pso', 'PSO675G9157' => 'pso', 'PSO832G1660' => 'pso', 'PSO832G1969' => 'pso', 'QL02p007186' => 'qlo', 'QL02p033904' => 'qlo', 'QL03p064391' => 'qlo', 'QL05p040593' => 'qlo', 'QL05p058242' => 'qlo', 'QL08p021825' => 'qlo', 'QL11p004981' => 'qlo', 'RcHm_v2.0_Chr1g0318301' => 'rch', 'RcHm_v2.0_Chr4g0418501' => 'rch', 'RcHm_v2.0_Chr4g0439971' => 'rch', 'RcHm_v2.0_Chr5g0008541' => 'rch', 'RcHm_v2.0_Chr5g0014101' => 'rch', 'RcHm_v2.0_Chr5g0014131' => 'rch', 'RcHm_v2.0_Chr5g0033621' => 'rch', 'RcHm_v2.0_Chr6g0272041' => 'rch', 'RcHm_v2.0_Chr6g0278831' => 'rch', 'Rhsim02G0130400' => 'rsi', 'Rhsim02G0171100' => 'rsi', 'Rhsim05G0053000' => 'rsi', 'Rhsim05G0053100' => 'rsi', 'Rhsim06G0096500' => 'rsi', 'Rhsim06G0096600' => 'rsi', 'Rhsim06G0199100' => 'rsi', 'Rhsim12G0062300' => 'rsi', 'Rhsim12G0062800' => 'rsi', 'Sabra02G0118600' => 'sbr', 'Sabra04G0027300' => 'sbr', 'Sabra04G0119500' => 'sbr', 'Sabra08G0112500' => 'sbr', 'Sabra11G0036800' => 'sbr', 'Sabra11G0103800' => 'sbr', 'Sabra13G0096300' => 'sbr', 'Sabra16G0262300' => 'sbr', 'Sabra18G0091700' => 'sbr', 'Sabra19G0095400' => 'sbr', 'SalBow6G3080' => 'sbo', 'SalBow7G1157' => 'sbo', 'SalBow7G2123' => 'sbo', 'SalBow7G2285' => 'sbo', 'SalBow7G3537' => 'sbo', 'SalBow8G2947' => 'sbo', 'SalBow8G4463' => 'sbo', 'SalBow8G5466' => 'sbo', 'Sc01g0001750' => 'sci', 'Sc02g0006640' => 'sci', 'Sc02g0006670' => 'sci', 'Sc04g0008220' => 'sci', 'Sc05g0006190' => 'sci', 'Sc08g0002760' => 'sci', 'Sc17g0006170' => 'sci', 'Sc22g0002050' => 'sci', 'Sc23g0001190' => 'sci', 'Sc24g0000980' => 'sci', 'Sed0006245' => 'sed', 'Sed0007543' => 'sed', 'Sed0009411' => 'sed', 'Sed0010765' => 'sed', 'Sed0012944' => 'sed', 'Sed0014682' => 'sed', 'Sed0016174' => 'sed', 'Sed0016796' => 'sed', 'Sed0020317' => 'sed', 'Sed0021467' => 'sed', 'SEGI_01316' => 'sgi', 'SEGI_03374' => 'sgi', 'SEGI_16265' => 'sgi', 'SEGI_18569' => 'sgi', 'SEGI_20351' => 'sgi', 'SEGI_26395' => 'sgi', 'SEGI_29469' => 'sgi', 'SEGI_34771' => 'sgi', 'SEGI_36769' => 'sgi', 'SEGI_37139' => 'sgi', 'SGA_v2.0_scaffold100G29687' => 'sas', 'SGA_v2.0_scaffold118G32472' => 'sas', 'SGA_v2.0_scaffold14G07051' => 'sas', 'SGA_v2.0_scaffold183G39845' => 'sas', 'SGA_v2.0_scaffold1G00174' => 'sas', 'SGA_v2.0_scaffold22G09714' => 'sas', 'SGA_v2.0_scaffold333G48992' => 'sas', 'SGA_v2.0_scaffold46G17491' => 'sas', 'SGA_v2.0_scaffold49G18294' => 'sas', 'SGA_v2.0_scaffold63G21658' => 'sas', 'SHI01741' => 'shi', 'SHI05771' => 'shi', 'SHI18077' => 'shi', 'SHI20525' => 'shi', 'SHI20527' => 'shi', 'SHI20528' => 'shi', 'SMO172G0185' => 'smo', 'SMO198G0020' => 'smo', 'SMO351G0006' => 'smo', 'SMO356G0118' => 'smo', 'SMO358G0296' => 'smo', 'SMO367G0079' => 'smo', 'SMO367G1277' => 'smo', 'Solyc01g014220.3' => 'sly', 'Solyc01g111770.2' => 'sly', 'Solyc02g078180.3' => 'sly', 'Solyc03g006430.3' => 'sly', 'Solyc03g006456.1' => 'sly', 'Solyc03g079860.2' => 'sly', 'Solyc04g079770.3' => 'sly', 'Solyc05g007430.4' => 'sly', 'Solyc07g063150.3' => 'sly', 'Solyc08g016620.3' => 'sly', 'Solyc09g057590.3' => 'sly', 'Solyc09g057600.1' => 'sly', 'Solyc10g009050.3' => 'sly', 'Solyc11g017420.2' => 'sly', 'Sopen01g053810' => 'spe', 'Sopen02g023040' => 'spe', 'Sopen03g002440' => 'spe', 'Sopen04g033350' => 'spe', 'Sopen05g003310' => 'spe', 'Sopen07g004050' => 'spe', 'Sopen07g031340' => 'spe', 'Sopen08g006990' => 'spe', 'Sopen10g004830' => 'spe', 'Sopen11g009370' => 'spe', 'Sp1g24450' => 'spa', 'Sp1g29670' => 'spa', 'Sp1g39600' => 'spa', 'Sp2g11080' => 'spa', 'Sp2g13970' => 'spa', 'Sp4g16130' => 'spa', 'Sp6g13080' => 'spa', 'Sp7g37270' => 'spa', 'TAR371G0065' => 'tar', 'TAR376G0340' => 'tar', 'TAR376G0435' => 'tar', 'TAR381G0002' => 'tar', 'TAR381G1236' => 'tar', 'TAR624G0055' => 'tar', 'TAR624G0324' => 'tar', 'TAR624G0696' => 'tar', 'TAR624G0906' => 'tar', 'TAR625G0107' => 'tar', 'TAR626G0015' => 'tar', 'TAR626G1356' => 'tar', 'TAR627G0888' => 'tar', 'TAR628G0399' => 'tar', 'TAR628G1327' => 'tar', 'TAR629G2831' => 'tar', 'TAR629G2874' => 'tar', 'TAR633G1432' => 'tar', 'TAR633G2771' => 'tar', 'THA.LOC104803394' => 'tha', 'THA.LOC104805153' => 'tha', 'THA.LOC104806784' => 'tha', 'THA.LOC104810473' => 'tha', 'THA.LOC104813100' => 'tha', 'THA.LOC104814215' => 'tha', 'THA.LOC104815554' => 'tha', 'THA.LOC104820544' => 'tha', 'THA.LOC104824754' => 'tha', 'THA.LOC104827717' => 'tha', 'Thecc.02G031400' => 'tca', 'Thecc.02G055900' => 'tca', 'Thecc.02G350800' => 'tca', 'Thecc.06G150900' => 'tca', 'Thecc.06G186600' => 'tca', 'Thecc.07G089600' => 'tca', 'Thecc.08G020400' => 'tca', 'Thecc.08G182100' => 'tca', 'Thhalv10000873m.g' => 'esa', 'Thhalv10004185m.g' => 'esa', 'Thhalv10006981m.g' => 'esa', 'Thhalv10007204m.g' => 'esa', 'Thhalv10011374m.g' => 'esa', 'Thhalv10013482m.g' => 'esa', 'Thhalv10017801m.g' => 'esa', 'Thhalv10024983m.g' => 'esa', 'TPR.G12072' => 'tpr', 'TPR.G15769' => 'tpr', 'TPR.G16504' => 'tpr', 'TPR.G16506' => 'tpr', 'TPR.G24345' => 'tpr', 'TPR.G26666' => 'tpr', 'TPR.G27320' => 'tpr', 'TPR.G31819' => 'tpr', 'TPR.G38879' => 'tpr', 'TPR.G39015' => 'tpr', 'TPR.G8819' => 'tpr', 'TWI09G0924' => 'twi', 'TWI12G0811' => 'twi', 'TWI12G1294' => 'twi', 'TWI31G0150' => 'twi', 'TWI36G1262' => 'twi', 'TWI38G1287' => 'twi', 'TWI38G1633' => 'twi', 'TWI38G1982' => 'twi', 'TWI39G0116' => 'twi', 'TWI60G1011' => 'twi', 'TWI63G0171' => 'twi', 'TWI73G0839' => 'twi', 'TWI79G1511' => 'twi', 'unitig_0.g915' => 'ugi', 'unitig_0.g916' => 'ugi', 'unitig_21.g20219' => 'ugi', 'unitig_21.g20416' => 'ugi', 'unitig_578.g16132' => 'ugi', 'unitig_578.g16718' => 'ugi', 'unitig_62.g23481' => 'ugi', 'unitig_744.g24535' => 'ugi', 'unitig_749.g13525' => 'ugi', 'vmacro01248' => 'vma', 'vmacro02290' => 'vma', 'vmacro10946' => 'vma', 'vmacro11865' => 'vma', 'vmacro12493' => 'vma', 'vmacro17322' => 'vma', 'vmacro21599' => 'vma', 'vmacro23041' => 'vma', 'VMungo0251G0004' => 'vmu', 'VMungo0251G2639' => 'vmu', 'VMungo0251G2967' => 'vmu', 'VMungo0540G0864' => 'vmu', 'VMungo0540G1569' => 'vmu', 'VMungo0647G0317' => 'vmu', 'VMungo0720G1373' => 'vmu', 'VMungo0720G1508' => 'vmu', 'VMungo1080G0485' => 'vmu', 'VMungo1215G3177' => 'vmu', 'Zm00001eb112600' => 'zma', 'Zm00001eb120220' => 'zma', 'Zm00001eb153240' => 'zma', 'Zm00001eb168880' => 'zma', 'Zm00001eb213920' => 'zma', 'Zm00001eb228280' => 'zma', 'Zm00001eb254580' => 'zma', 'Zm00001eb272180' => 'zma', 'Zm00001eb293190' => 'zma', 'Zm00001eb322930' => 'zma', 'Zm00001eb353360' => 'zma', 'Zm00001eb353390' => 'zma', 'Zm00001eb353430' => 'zma', 'Zm00001eb353440' => 'zma', 'Zm00001eb353780' => 'zma' ), 'gf_id' => 'HOM05D000499', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000499' ), 'data_identifier' => 'HOM05D000499', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000499', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1066', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p29780' => 'bna', 'A02p33180' => 'bna', 'A03p16470' => 'bna', 'A03p66010' => 'bna', 'A04p25970' => 'bna', 'A06p01270' => 'bna', 'A06p46080' => 'bna', 'A07p11400' => 'bna', 'A08p01840' => 'bna', 'A08p08230' => 'bna', 'A08p25740' => 'bna', 'A09p32070' => 'bna', 'A09p37830' => 'bna', 'A09p42840' => 'bna', 'A09p42850' => 'bna', 'Aa31LG10G2060' => 'aar', 'Aa31LG2G7410' => 'aar', 'Aa31LG6G10200' => 'aar', 'Aa31LG6G16680' => 'aar', 'Aa31LG6G8470' => 'aar', 'Aa31LG9G12730' => 'aar', 'Aa31LG9G13680' => 'aar', 'Aa31LG9G14920' => 'aar', 'Aa31LG9G6650' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4977' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5467' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3254' => 'aag', 'Actinidia02578' => 'ach', 'Actinidia07693' => 'ach', 'Actinidia08413' => 'ach', 'Actinidia08414' => 'ach', 'Actinidia15289' => 'ach', 'Actinidia19871' => 'ach', 'Actinidia21475' => 'ach', 'Actinidia22576' => 'ach', 'Actinidia28327' => 'ach', 'Actinidia32491' => 'ach', 'Actinidia39463' => 'ach', 'Actinidia39571' => 'ach', 'Ah.01g013750' => 'amhyb', 'Ah.01g023210' => 'amhyb', 'Ah.04g164850' => 'amhyb', 'Ah.05g178060' => 'amhyb', 'Ah.07g204270' => 'amhyb', 'Ah.07g208480' => 'amhyb', 'Ah.09g237410' => 'amhyb', 'Ah.14g089460' => 'amhyb', 'AL1G41790' => 'aly', 'AL1G49050' => 'aly', 'AL1G53810' => 'aly', 'AL1G61400' => 'aly', 'AL4G18580' => 'aly', 'AL5G12510' => 'aly', 'AL5G12540' => 'aly', 'AL6G43230' => 'aly', 'AL7G10370' => 'aly', 'AL7G19250' => 'aly', 'AL8G12240' => 'aly', 'AL8G18540' => 'aly', 'Aqoxy1G02409' => 'aox', 'Aqoxy2G03993' => 'aox', 'Aqoxy3G03357' => 'aox', 'Aqoxy4G00785' => 'aox', 'Aqoxy5G02598' => 'aox', 'Aqoxy6G00132' => 'aox', 'Aqoxy7G01776' => 'aox', 'Aqoxy7G02316' => 'aox', 'Aqoxy7G03973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.12AFKW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B8730' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27IQR1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3F75VG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3RE0GA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41TCQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.527VTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FIR39' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5W8UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DA38EV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ63HS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H1I32C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HC27T5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4M8AP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7N3CZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9UVDZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LS1NQA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT1D4B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SKC4TM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCFV76' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF9Q1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQWD9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1ZM88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WE07RT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YCK7VH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJE6Q6' => 'arhy', 'AT1G28240' => 'ath', 'AT1G34550' => 'ath', 'AT1G53040' => 'ath', 'AT2G02910' => 'ath', 'AT4G09630' => 'ath', 'AT4G38500' => 'ath', 'AT5G42660' => 'ath', 'AT5G46220' => 'ath', 'ATR0152G026' => 'atr', 'ATR0564G343' => 'atr', 'ATR0706G151' => 'atr', 'ATR0733G207' => 'atr', 'ATR0751G234' => 'atr', 'ATR0807G048' => 'atr', 'ATR1091G084' => 'atr', 'Atru.chr10.1229' => 'acertr', 'Atru.chr10.1230' => 'acertr', 'Atru.chr10.1874' => 'acertr', 'Atru.chr11.1808' => 'acertr', 'Atru.chr13.1795' => 'acertr', 'Atru.chr13.570' => 'acertr', 'Atru.chr2.2608' => 'acertr', 'Atru.chr2.2609' => 'acertr', 'Atru.chr5.3428' => 'acertr', 'Atru.chr8.1171' => 'acertr', 'AUR62004651' => 'cqu', 'AUR62008675' => 'cqu', 'AUR62010014' => 'cqu', 'AUR62013004' => 'cqu', 'AUR62014825' => 'cqu', 'AUR62015015' => 'cqu', 'AUR62015151' => 'cqu', 'AUR62017020' => 'cqu', 'AUR62019422' => 'cqu', 'AUR62023570' => 'cqu', 'AUR62025571' => 'cqu', 'AUR62029098' => 'cqu', 'AUR62033863' => 'cqu', 'AUR62034296' => 'cqu', 'AUR62040075' => 'cqu', 'BcaB02g07334' => 'bca', 'BcaB02g10575' => 'bca', 'BcaB03g12119' => 'bca', 'BcaB03g12120' => 'bca', 'BcaB03g13945' => 'bca', 'BcaB04g17123' => 'bca', 'BcaB04g17867' => 'bca', 'BcaB04g19839' => 'bca', 'BcaB07g30317' => 'bca', 'BcaB07g32432' => 'bca', 'BcaB07g33362' => 'bca', 'BcaB08g36611' => 'bca', 'BcaC01g00028' => 'bca', 'BcaC01g01356' => 'bca', 'BcaC01g02034' => 'bca', 'BcaC01g06051' => 'bca', 'BcaC03g16839' => 'bca', 'BcaC03g17176' => 'bca', 'BcaC05g26829' => 'bca', 'BcaC06g31490' => 'bca', 'BcaC06g35344' => 'bca', 'BcaC06g36570' => 'bca', 'BcaC07g37537' => 'bca', 'BcaC08g43491' => 'bca', 'BcaC08g43773' => 'bca', 'BcaNung00234' => 'bca', 'BcaNung01982' => 'bca', 'BcaNung03707' => 'bca', 'BcaNung06454' => 'bca', 'BolC2t10762H' => 'bol', 'BolC2t11191H' => 'bol', 'BolC3t14322H' => 'bol', 'BolC3t19747H' => 'bol', 'BolC3t21425H' => 'bol', 'BolC4t27800H' => 'bol', 'BolC5t31423H' => 'bol', 'BolC6t35951H' => 'bol', 'BolC6t36282H' => 'bol', 'BolC7t40678H' => 'bol', 'BolC7t40679H' => 'bol', 'BolC7t42222H' => 'bol', 'BolC7t43492H' => 'bol', 'BolC7t46785H' => 'bol', 'BolC8t47853H' => 'bol', 'BolC9t56805H' => 'bol', 'BraA02t08000Z' => 'bra', 'BraA02t08341Z' => 'bra', 'BraA03t10936Z' => 'bra', 'BraA03t15657Z' => 'bra', 'BraA04t18100Z' => 'bra', 'BraA05t20523Z' => 'bra', 'BraA06t23353Z' => 'bra', 'BraA06t27473Z' => 'bra', 'BraA06t27769Z' => 'bra', 'BraA07t28928Z' => 'bra', 'BraA08t32236Z' => 'bra', 'BraA08t32841Z' => 'bra', 'BraA08t34524Z' => 'bra', 'BraA09t38742Z' => 'bra', 'BraA09t39295Z' => 'bra', 'C02p47180' => 'bna', 'C02p50990' => 'bna', 'C03p19360' => 'bna', 'C03p74950' => 'bna', 'C03p91000' => 'bna', 'C04p63260' => 'bna', 'C05p27050' => 'bna', 'C06p08750' => 'bna', 'C06p11490' => 'bna', 'C07p02820' => 'bna', 'C07p17180' => 'bna', 'C07p29440' => 'bna', 'C07p63730' => 'bna', 'C09p39260' => 'bna', 'CAN.G1164.34' => 'can', 'CAN.G1164.39' => 'can', 'CAN.G1530.3' => 'can', 'CAN.G162.61' => 'can', 'CAN.G176.6' => 'can', 'CAN.G289.49' => 'can', 'CAN.G370.21' => 'can', 'CAN.G370.22' => 'can', 'CAN.G371.117' => 'can', 'CAN.G58.37' => 'can', 'CAN.G588.98' => 'can', 'CANSAT21G2266' => 'cansat', 'CANSAT25G2799' => 'cansat', 'CANSAT35G0862' => 'cansat', 'CANSAT35G1704' => 'cansat', 'CANSAT35G1760' => 'cansat', 'CANSAT56G3971' => 'cansat', 'CANSAT56G4116' => 'cansat', 'CANSAT80G1259' => 'cansat', 'CARHR027730' => 'chi', 'CARHR033880' => 'chi', 'CARHR043270' => 'chi', 'CARHR145330' => 'chi', 'CARHR145340' => 'chi', 'CARHR175570' => 'chi', 'CARHR181570' => 'chi', 'CARHR258470' => 'chi', 'CARHR260490' => 'chi', 'CARHR294220' => 'chi', 'Carub.0001s2668' => 'cru', 'Carub.0001s3257' => 'cru', 'Carub.0001s4220' => 'cru', 'Carub.0005s0179' => 'cru', 'Carub.0006s2807' => 'cru', 'Carub.0007s0039' => 'cru', 'Carub.0008s0169' => 'cru', 'Carub.0008s0636' => 'cru', 'Ca_00338_v3' => 'car', 'Ca_00542_v3' => 'car', 'Ca_01844_v3' => 'car', 'Ca_10611_v3' => 'car', 'Ca_13326_v3' => 'car', 'Ca_17944_v3' => 'car', 'Ca_18546_v3' => 'car', 'Ca_24219_v3' => 'car', 'Ca_29972_v3' => 'car', 'CBR_g3681' => 'cbr', 'CBR_g40021' => 'cbr', 'Cc01_g08140' => 'ccan', 'Cc02_g13410' => 'ccan', 'Cc02_g37480' => 'ccan', 'Cc05_g12030' => 'ccan', 'Cc09_g03370' => 'ccan', 'Cc09_g10300' => 'ccan', 'Cc10_g03530' => 'ccan', 'Cc10_g11380' => 'ccan', 'CDE01G0176' => 'cde', 'CDE02G0675' => 'cde', 'CDE02G0942' => 'cde', 'CDE02G1153' => 'cde', 'CDE02G4177' => 'cde', 'CDE04G2117' => 'cde', 'CDE04G2736' => 'cde', 'CDE08G1161' => 'cde', 'CDE09G1238' => 'cde', 'Cfa000467' => 'cfa', 'Cfa000947' => 'cfa', 'Cfa004969' => 'cfa', 'Cfa005284' => 'cfa', 'Cfa008993' => 'cfa', 'Cfa018187' => 'cfa', 'Cfa018454' => 'cfa', 'Cfa020585' => 'cfa', 'Ciclev10000424m.g' => 'ccl', 'Ciclev10003605m.g' => 'ccl', 'Ciclev10007828m.g' => 'ccl', 'Ciclev10014620m.g' => 'ccl', 'Ciclev10015169m.g' => 'ccl', 'Ciclev10018291m.g' => 'ccl', 'Ciclev10028256m.g' => 'ccl', 'Ciclev10033822m.g' => 'ccl', 'CiPaw.05G060300' => 'cil', 'CiPaw.05G085000' => 'cil', 'CiPaw.06G083700' => 'cil', 'CiPaw.06G120300' => 'cil', 'CiPaw.09G060500' => 'cil', 'CiPaw.09G123800' => 'cil', 'CiPaw.11G169700' => 'cil', 'CiPaw.12G118300' => 'cil', 'CiPaw.15G071000' => 'cil', 'CiPaw.15G081900' => 'cil', 'ClCG01G024610' => 'cla', 'ClCG03G006070' => 'cla', 'ClCG05G019250' => 'cla', 'ClCG09G009500' => 'cla', 'ClCG11G008200' => 'cla', 'ClCG11G018080' => 'cla', 'COL.COLO4_17373' => 'col', 'COL.COLO4_22994' => 'col', 'COL.COLO4_26389' => 'col', 'COL.COLO4_27170' => 'col', 'COL.COLO4_31074' => 'col', 'COL.COLO4_31465' => 'col', 'COL.COLO4_36438' => 'col', 'COL.COLO4_36439' => 'col', 'Cpa.g.c38781' => 'cpa', 'Cpa.g.sc128.12' => 'cpa', 'Cpa.g.sc166.7' => 'cpa', 'Cpa.g.sc166.8' => 'cpa', 'Cpa.g.sc20.111' => 'cpa', 'Cpa.g.sc27.31' => 'cpa', 'Cpa.g.sc64.36' => 'cpa', 'Cpa.g.sc64.37' => 'cpa', 'Cpa.g.sc66.49' => 'cpa', 'Cpa.g.sc80.64' => 'cpa', 'CsaV3_1G012320' => 'csa', 'CsaV3_2G008480' => 'csa', 'CsaV3_2G033450' => 'csa', 'CsaV3_3G044830' => 'csa', 'CsaV3_4G033710' => 'csa', 'CsaV3_6G051730' => 'csa', 'CsaV3_7G025350' => 'csa', 'CSS0001067' => 'camsi', 'CSS0005996' => 'camsi', 'CSS0006590' => 'camsi', 'CSS0009673' => 'camsi', 'CSS0010201' => 'camsi', 'CSS0010549' => 'camsi', 'CSS0011364' => 'camsi', 'CSS0014473' => 'camsi', 'CSS0014961' => 'camsi', 'CSS0020191' => 'camsi', 'CSS0021165' => 'camsi', 'CSS0022306' => 'camsi', 'CSS0030591' => 'camsi', 'CSS0030696' => 'camsi', 'CSS0032653' => 'camsi', 'CSS0037487' => 'camsi', 'CSS0041102' => 'camsi', 'CSS0041261' => 'camsi', 'CSS0046246' => 'camsi', 'CSS0049256' => 'camsi', 'DCAR_004075' => 'dca', 'DCAR_011538' => 'dca', 'DCAR_019553' => 'dca', 'DCAR_020952' => 'dca', 'DCAR_021739' => 'dca', 'DCAR_027407' => 'dca', 'DCAR_027913' => 'dca', 'DCAR_028066' => 'dca', 'Dinv05899' => 'din', 'Dinv07563' => 'din', 'Dinv08010' => 'din', 'Dinv14125' => 'din', 'Dinv20172' => 'din', 'Dinv30743' => 'din', 'Dinv31229' => 'din', 'Dinv34162' => 'din', 'Dinv36028' => 'din', 'Dinv39368' => 'din', 'Dinv40565' => 'din', 'Dinv41706' => 'din', 'Duzib052G0089' => 'dzi', 'Duzib116G0641' => 'dzi', 'Duzib132G0069' => 'dzi', 'Duzib132G1219' => 'dzi', 'Duzib147G0278' => 'dzi', 'Duzib160G0480' => 'dzi', 'Duzib170G0661' => 'dzi', 'Duzib177G0591' => 'dzi', 'Duzib187G1353' => 'dzi', 'Duzib192G0858' => 'dzi', 'Duzib192G0883' => 'dzi', 'Duzib213G0506' => 'dzi', 'Duzib235G0289' => 'dzi', 'Duzib251G0422' => 'dzi', 'ECA232G3898' => 'eca', 'ECA233G5950' => 'eca', 'ECA234G1699' => 'eca', 'ECA234G2421' => 'eca', 'ECA236G0426' => 'eca', 'ECA236G4331' => 'eca', 'ECA248G2573' => 'eca', 'EL10Ac1g00077' => 'bvu', 'EL10Ac1g01746' => 'bvu', 'EL10Ac2g03464' => 'bvu', 'EL10Ac4g08176' => 'bvu', 'EL10Ac7g17521' => 'bvu', 'EL10Ac8g20386' => 'bvu', 'EL10Ac9g21343' => 'bvu', 'EL10Ac9g22688' => 'bvu', 'Eucgr.B03434' => 'egr', 'Eucgr.D00618' => 'egr', 'Eucgr.E02395' => 'egr', 'Eucgr.F01129' => 'egr', 'Eucgr.F02622' => 'egr', 'Eucgr.F04207' => 'egr', 'FAN01G0570' => 'fan', 'FAN03G3351' => 'fan', 'FAN06G3702' => 'fan', 'FAN07G2149' => 'fan', 'FAN10G3758' => 'fan', 'FAN11G1170' => 'fan', 'FAN11G2050' => 'fan', 'FAN11G2724' => 'fan', 'FAN12G1700' => 'fan', 'FAN12G2028' => 'fan', 'FAN15G1160' => 'fan', 'FAN15G3063' => 'fan', 'FAN16G2540' => 'fan', 'FAN16G3077' => 'fan', 'FAN16G3624' => 'fan', 'FAN17G0221' => 'fan', 'FAN20G2492' => 'fan', 'FAN20G2905' => 'fan', 'FAN21G0548' => 'fan', 'FAN21G1300' => 'fan', 'FAN22G0077' => 'fan', 'FAN22G1315' => 'fan', 'FAN24G1280' => 'fan', 'FAN24G1445' => 'fan', 'FAN24G3527' => 'fan', 'FAN25G0464' => 'fan', 'FAN25G2885' => 'fan', 'FAN25G3270' => 'fan', 'FAN27G1101' => 'fan', 'FAN27G2846' => 'fan', 'FAN27G3524' => 'fan', 'FvH4_2g11770' => 'fve', 'FvH4_2g15630' => 'fve', 'FvH4_3g05570' => 'fve', 'FvH4_3g09110' => 'fve', 'FvH4_3g19940' => 'fve', 'FvH4_4g04821' => 'fve', 'FvH4_4g31480' => 'fve', 'FvH4_7g01740' => 'fve', 'Glyma.05G130400' => 'gma', 'Glyma.05G156400' => 'gma', 'Glyma.07G197000' => 'gma', 'Glyma.08G085151' => 'gma', 'Glyma.08G114500' => 'gma', 'Glyma.08G300400' => 'gma', 'Glyma.10G215800' => 'gma', 'Glyma.12G224400' => 'gma', 'Glyma.13G179300' => 'gma', 'Glyma.13G218151' => 'gma', 'Glyma.13G238800' => 'gma', 'Glyma.13G276900' => 'gma', 'Glyma.14G078200' => 'gma', 'Glyma.15G074500' => 'gma', 'Glyma.15G094100' => 'gma', 'Glyma.17G247200' => 'gma', 'Glyma.18G120100' => 'gma', 'Glyma.20G176000' => 'gma', 'Gohir.A01G063600' => 'ghi', 'Gohir.A01G170301' => 'ghi', 'Gohir.A02G060500' => 'ghi', 'Gohir.A05G133850' => 'ghi', 'Gohir.A05G161400' => 'ghi', 'Gohir.A06G012900' => 'ghi', 'Gohir.A06G035901' => 'ghi', 'Gohir.A06G127100' => 'ghi', 'Gohir.A06G210500' => 'ghi', 'Gohir.A08G008650' => 'ghi', 'Gohir.A09G072700' => 'ghi', 'Gohir.A09G088301' => 'ghi', 'Gohir.A10G040600' => 'ghi', 'Gohir.A12G036300' => 'ghi', 'Gohir.A12G143350' => 'ghi', 'Gohir.A12G165500' => 'ghi', 'Gohir.A13G145700' => 'ghi', 'Gohir.D01G050000' => 'ghi', 'Gohir.D01G051366' => 'ghi', 'Gohir.D01G161350' => 'ghi', 'Gohir.D02G065900' => 'ghi', 'Gohir.D05G164200' => 'ghi', 'Gohir.D05G355500' => 'ghi', 'Gohir.D06G010400' => 'ghi', 'Gohir.D06G111250' => 'ghi', 'Gohir.D06G132000' => 'ghi', 'Gohir.D06G210500' => 'ghi', 'Gohir.D07G165675' => 'ghi', 'Gohir.D08G062240' => 'ghi', 'Gohir.D08G086101' => 'ghi', 'Gohir.D08G138060' => 'ghi', 'Gohir.D09G072300' => 'ghi', 'Gohir.D10G041400' => 'ghi', 'Gohir.D11G191020' => 'ghi', 'Gohir.D11G212066' => 'ghi', 'Gohir.D12G036300' => 'ghi', 'Gohir.D12G168600' => 'ghi', 'Gohir.D13G150600' => 'ghi', 'Gorai.001G057300' => 'gra', 'Gorai.002G069900' => 'gra', 'Gorai.002G200000' => 'gra', 'Gorai.003G067600' => 'gra', 'Gorai.005G074800' => 'gra', 'Gorai.006G087300' => 'gra', 'Gorai.008G037500' => 'gra', 'Gorai.008G181400' => 'gra', 'Gorai.009G169400' => 'gra', 'Gorai.009G387900' => 'gra', 'Gorai.010G013300' => 'gra', 'Gorai.010G153800' => 'gra', 'Gorai.010G255800' => 'gra', 'Gorai.011G043700' => 'gra', 'Gorai.011G198900' => 'gra', 'Gorai.013G168400' => 'gra', 'GSVIVG01005212001' => 'vvi', 'GSVIVG01006163001' => 'vvi', 'GSVIVG01009625001' => 'vvi', 'GSVIVG01014338001' => 'vvi', 'GSVIVG01020005001' => 'vvi', 'GSVIVG01021450001' => 'vvi', 'GSVIVG01023975001' => 'vvi', 'GSVIVG01034490001' => 'vvi', 'HanXRQChr04g0112071' => 'han', 'HanXRQChr05g0131151' => 'han', 'HanXRQChr09g0262371' => 'han', 'HanXRQChr09g0268401' => 'han', 'HanXRQChr10g0279241' => 'han', 'HanXRQChr10g0297961' => 'han', 'HanXRQChr11g0326231' => 'han', 'HanXRQChr11g0328471' => 'han', 'HanXRQChr16g0507941' => 'han', 'HanXRQChr17g0560211' => 'han', 'Haze_02108' => 'cav', 'Haze_02428' => 'cav', 'Haze_05593' => 'cav', 'Haze_06448' => 'cav', 'Haze_09427' => 'cav', 'Haze_12022' => 'cav', 'Haze_17612' => 'cav', 'Haze_17928' => 'cav', 'Hma1.2p1_0032F.1_g019250' => 'hma', 'Hma1.2p1_0163F.1_g072690' => 'hma', 'Hma1.2p1_0265F.1_g106710' => 'hma', 'Hma1.2p1_0286F.1_g113970' => 'hma', 'Hma1.2p1_0363F.1_g136640' => 'hma', 'Hma1.2p1_0584F.1_g183470' => 'hma', 'Hma1.2p1_0885F.1_g232570' => 'hma', 'HPP92_006022' => 'vpl', 'HPP92_007320' => 'vpl', 'HPP92_011521' => 'vpl', 'HPP92_019387' => 'vpl', 'HPP92_024038' => 'vpl', 'Hund05891' => 'sun', 'Hund06450' => 'sun', 'Hund12053' => 'sun', 'Hund16800' => 'sun', 'Hund21222' => 'sun', 'Hund22896' => 'sun', 'Hund23746' => 'sun', 'Hund27083' => 'sun', 'Lalb_Chr02g0141831' => 'lal', 'Lalb_Chr02g0141841' => 'lal', 'Lalb_Chr05g0220411' => 'lal', 'Lalb_Chr06g0162081' => 'lal', 'Lalb_Chr09g0327651' => 'lal', 'Lalb_Chr13g0295051' => 'lal', 'Lalb_Chr15g0086801' => 'lal', 'Lalb_Chr16g0383781' => 'lal', 'Lalb_Chr16g0383791' => 'lal', 'Lalb_Chr18g0055441' => 'lal', 'Lalb_Chr18g0059611' => 'lal', 'Lalb_Chr20g0109661' => 'lal', 'Lalb_Chr20g0109831' => 'lal', 'Lalb_Chr20g0121871' => 'lal', 'Lalb_Chr22g0355361' => 'lal', 'Lalb_Chr25g0286371' => 'lal', 'Lj1A1187G43' => 'lonja', 'Lj1A1205T50' => 'lonja', 'Lj1A800G33' => 'lonja', 'Lj1C1187T7' => 'lonja', 'Lj1C843T11' => 'lonja', 'Lj1g0010940' => 'lja', 'Lj2A288T69' => 'lonja', 'Lj3g0024276' => 'lja', 'Lj4A47T76' => 'lonja', 'Lj4g0005805' => 'lja', 'Lj4g0006097' => 'lja', 'Lj4g0008528' => 'lja', 'Lj4g0024907' => 'lja', 'Lj5g0012472' => 'lja', 'Lj5g0018648' => 'lja', 'Lj6C789G1' => 'lonja', 'Lj6g0004000' => 'lja', 'Lj7A292G67' => 'lonja', 'Lj7A292T64' => 'lonja', 'Lj9A400T58' => 'lonja', 'Lsat_1_v5_gn_1_126181' => 'lsa', 'Lsat_1_v5_gn_4_123041' => 'lsa', 'Lsat_1_v5_gn_4_133620' => 'lsa', 'Lsat_1_v5_gn_4_53221' => 'lsa', 'Lsat_1_v5_gn_4_71961' => 'lsa', 'Lsat_1_v5_gn_7_105241' => 'lsa', 'Lsat_1_v5_gn_7_21361' => 'lsa', 'Lsat_1_v5_gn_7_28860' => 'lsa', 'Lsat_1_v5_gn_7_31260' => 'lsa', 'Lsat_1_v5_gn_8_52801' => 'lsa', 'Manes.02G191400' => 'mes', 'Manes.03G110100' => 'mes', 'Manes.04G071100' => 'mes', 'Manes.05G100500' => 'mes', 'Manes.05G164700' => 'mes', 'Manes.15G087000' => 'mes', 'Manes.15G121500' => 'mes', 'Manes.16G028300' => 'mes', 'Manes.17G046100' => 'mes', 'Manes.17G069800' => 'mes', 'Manes.18G100500' => 'mes', 'Mapoly0002s0109' => 'mpo', 'Mapoly0024s0007' => 'mpo', 'Mapoly0089s0032' => 'mpo', 'MBI04_g42241_MAGBIO' => 'mbi', 'MBI05_g11988_MAGBIO' => 'mbi', 'MBI05_g35452_MAGBIO' => 'mbi', 'MBI07_g30179_MAGBIO' => 'mbi', 'MBI07_g35859_MAGBIO' => 'mbi', 'MBI07_g35860_MAGBIO' => 'mbi', 'MBI07_g37166_MAGBIO' => 'mbi', 'MBI08_g18172_MAGBIO' => 'mbi', 'MBI09_g08441_MAGBIO' => 'mbi', 'MBI13_g01676_MAGBIO' => 'mbi', 'MBI14_g42955_MAGBIO' => 'mbi', 'MBI16_g13161_MAGBIO' => 'mbi', 'MBI17_g27204_MAGBIO' => 'mbi', 'MBI19_g21595_MAGBIO' => 'mbi', 'MD00G1148400' => 'mdo', 'MD02G1301200' => 'mdo', 'MD03G1227800' => 'mdo', 'MD05G1041100' => 'mdo', 'MD05G1124800' => 'mdo', 'MD05G1284000' => 'mdo', 'MD05G1338800' => 'mdo', 'MD05G1338900' => 'mdo', 'MD07G1022800' => 'mdo', 'MD10G1047500' => 'mdo', 'MD10G1127500' => 'mdo', 'MD10G1262300' => 'mdo', 'MD10G1293800' => 'mdo', 'MD16G1074300' => 'mdo', 'Medtr1g021670' => 'mtr', 'Medtr1g096320' => 'mtr', 'Medtr2g013690' => 'mtr', 'Medtr2g019450' => 'mtr', 'Medtr2g085170' => 'mtr', 'Medtr4g088785' => 'mtr', 'Medtr8g055930' => 'mtr', 'Medtr8g085850' => 'mtr', 'MELO3C002605.2' => 'cme', 'MELO3C003891.2' => 'cme', 'MELO3C004012.2' => 'cme', 'MELO3C007134.2' => 'cme', 'MELO3C008118.2' => 'cme', 'MELO3C016700.2' => 'cme', 'MELO3C024127.2' => 'cme', 'MELO3C033361.2' => 'cme', 'MELO3C033362.2' => 'cme', 'Migut.C00430' => 'egut', 'Migut.C01246' => 'egut', 'Migut.E00101' => 'egut', 'Migut.H01486' => 'egut', 'Migut.H01939' => 'egut', 'Migut.K00360' => 'egut', 'Migut.M00910' => 'egut', 'Migut.M01139' => 'egut', 'Migut.N02677' => 'egut', 'MSTRG.13252' => 'ama', 'MSTRG.14701' => 'ama', 'MSTRG.1521' => 'ama', 'MSTRG.15884' => 'ama', 'MSTRG.16242' => 'ama', 'MSTRG.22285' => 'ama', 'MSTRG.22444' => 'ama', 'MSTRG.2349' => 'ama', 'MSTRG.26308' => 'ama', 'MSTRG.28296' => 'ama', 'MSTRG.9895' => 'ama', 'Nitab4.5_0000110g0060' => 'nta', 'Nitab4.5_0000420g0130' => 'nta', 'Nitab4.5_0000422g0030' => 'nta', 'Nitab4.5_0000560g0180' => 'nta', 'Nitab4.5_0000703g0100' => 'nta', 'Nitab4.5_0000786g0200' => 'nta', 'Nitab4.5_0001336g0020' => 'nta', 'Nitab4.5_0001796g0030' => 'nta', 'Nitab4.5_0003348g0060' => 'nta', 'Nitab4.5_0003698g0040' => 'nta', 'Nitab4.5_0003942g0090' => 'nta', 'Nitab4.5_0004775g0070' => 'nta', 'Nitab4.5_0004864g0030' => 'nta', 'Nitab4.5_0005615g0020' => 'nta', 'Nitab4.5_0009288g0030' => 'nta', 'Nitab4.5_0009341g0010' => 'nta', 'Nitab4.5_0009535g0010' => 'nta', 'Nn1g03995' => 'nnu', 'Nn1g04100' => 'nnu', 'Nn1g06530' => 'nnu', 'Nn3g16404' => 'nnu', 'Nn3g17212' => 'nnu', 'Nn3g20776' => 'nnu', 'Nn3g21923' => 'nnu', 'Nn5g27737' => 'nnu', 'Nn5g29461' => 'nnu', 'Nn7g38355' => 'nnu', 'Nn8g39873' => 'nnu', 'Oeu000548.2' => 'oeu', 'Oeu004672.1' => 'oeu', 'Oeu015605.2' => 'oeu', 'Oeu016092.1' => 'oeu', 'Oeu017879.3' => 'oeu', 'Oeu024910.1' => 'oeu', 'Oeu028965.1' => 'oeu', 'Oeu031269.1' => 'oeu', 'Oeu031270.1' => 'oeu', 'Oeu032535.1' => 'oeu', 'Oeu034151.1' => 'oeu', 'Oeu034152.1' => 'oeu', 'Oeu034588.2' => 'oeu', 'Oeu050846.1' => 'oeu', 'Oeu050849.2' => 'oeu', 'Oeu051063.2' => 'oeu', 'Oeu052368.1' => 'oeu', 'Oeu052370.1' => 'oeu', 'Os01g0210400' => 'osa', 'Os01g0304300' => 'osa', 'Os01g0749100' => 'osa', 'Os02g0745800' => 'osa', 'Os03g0769050' => 'osa', 'Os05g0531500' => 'osa', 'Os06g0724300' => 'osa', 'Os11g0198100' => 'osa', 'Peaxi162Scf00069g01425' => 'pax', 'Peaxi162Scf00280g00811' => 'pax', 'Peaxi162Scf00310g00615' => 'pax', 'Peaxi162Scf00362g00542' => 'pax', 'Peaxi162Scf00461g00310' => 'pax', 'Peaxi162Scf00530g00118' => 'pax', 'Peaxi162Scf00541g00057' => 'pax', 'Peaxi162Scf00661g00017' => 'pax', 'Peaxi162Scf00926g00027' => 'pax', 'Peaxi162Scf01064g00263' => 'pax', 'Peaxi162Scf01211g00135' => 'pax', 'PGR004G2336' => 'pgr', 'PGR042G0327' => 'pgr', 'PGR042G1957' => 'pgr', 'PGR042G2003' => 'pgr', 'PGR042G3929' => 'pgr', 'PGR083G1137' => 'pgr', 'PGR083G1364' => 'pgr', 'PGSC0003DMG400003381' => 'stu', 'PGSC0003DMG400003417' => 'stu', 'PGSC0003DMG400008981' => 'stu', 'PGSC0003DMG400012417' => 'stu', 'PGSC0003DMG400012823' => 'stu', 'PGSC0003DMG400016885' => 'stu', 'PGSC0003DMG400022812' => 'stu', 'PGSC0003DMG400029726' => 'stu', 'PGSC0003DMG401009243' => 'stu', 'PGSC0003DMG401031505' => 'stu', 'PGSC0003DMG402031505' => 'stu', 'Phvul.001G017600' => 'pvu', 'Phvul.002G193500' => 'pvu', 'Phvul.002G228900' => 'pvu', 'Phvul.002G236800' => 'pvu', 'Phvul.003G049500' => 'pvu', 'Phvul.005G072000' => 'pvu', 'Phvul.006G164800' => 'pvu', 'Phvul.006G185100' => 'pvu', 'Phvul.007G090000' => 'pvu', 'Potri.001G399800' => 'ptr', 'Potri.002G149900' => 'ptr', 'Potri.004G044100' => 'ptr', 'Potri.004G177600' => 'ptr', 'Potri.009G138000' => 'ptr', 'Potri.010G094000' => 'ptr', 'Potri.011G053000' => 'ptr', 'Potri.011G119300' => 'ptr', 'Potri.013G113700' => 'ptr', 'Potri.018G107800' => 'ptr', 'Potri.019G084100' => 'ptr', 'Pp3c14_23720' => 'ppa', 'Pp3c16_6340' => 'ppa', 'Pp3c23_13420' => 'ppa', 'Pp3c24_2740' => 'ppa', 'Pp3c25_860' => 'ppa', 'Pp3c8_21750' => 'ppa', 'Prupe.1G273000' => 'ppe', 'Prupe.1G273700' => 'ppe', 'Prupe.1G274100' => 'ppe', 'Prupe.2G023300' => 'ppe', 'Prupe.4G048000' => 'ppe', 'Prupe.4G080400' => 'ppe', 'Prupe.4G181200' => 'ppe', 'Prupe.8G056900' => 'ppe', 'Prupe.8G168700' => 'ppe', 'Psat1g189080' => 'psa', 'Psat1g204760' => 'psa', 'Psat4g175560' => 'psa', 'Psat4g177720' => 'psa', 'Psat5g244240' => 'psa', 'Psat6g010720' => 'psa', 'Psat6g187200' => 'psa', 'Psat7g072040' => 'psa', 'PSO017G3501' => 'pso', 'PSO063G2148' => 'pso', 'PSO063G5608' => 'pso', 'PSO210G6392' => 'pso', 'PSO541G2319' => 'pso', 'PSO541G2836' => 'pso', 'PSO541G4012' => 'pso', 'PSO541G6253' => 'pso', 'PSO675G0580' => 'pso', 'PSO675G0856' => 'pso', 'PSO675G5635' => 'pso', 'PSO675G9157' => 'pso', 'PSO832G1660' => 'pso', 'PSO832G1969' => 'pso', 'QL02p007186' => 'qlo', 'QL02p033904' => 'qlo', 'QL03p064391' => 'qlo', 'QL05p040593' => 'qlo', 'QL05p058242' => 'qlo', 'QL08p021825' => 'qlo', 'QL11p004981' => 'qlo', 'RcHm_v2.0_Chr1g0318301' => 'rch', 'RcHm_v2.0_Chr4g0418501' => 'rch', 'RcHm_v2.0_Chr4g0439971' => 'rch', 'RcHm_v2.0_Chr5g0008541' => 'rch', 'RcHm_v2.0_Chr5g0014101' => 'rch', 'RcHm_v2.0_Chr5g0014131' => 'rch', 'RcHm_v2.0_Chr5g0033621' => 'rch', 'RcHm_v2.0_Chr6g0272041' => 'rch', 'RcHm_v2.0_Chr6g0278831' => 'rch', 'Rhsim02G0130400' => 'rsi', 'Rhsim02G0171100' => 'rsi', 'Rhsim05G0053000' => 'rsi', 'Rhsim05G0053100' => 'rsi', 'Rhsim06G0096500' => 'rsi', 'Rhsim06G0096600' => 'rsi', 'Rhsim06G0199100' => 'rsi', 'Rhsim12G0062300' => 'rsi', 'Rhsim12G0062800' => 'rsi', 'Sabra02G0118600' => 'sbr', 'Sabra04G0027300' => 'sbr', 'Sabra04G0119500' => 'sbr', 'Sabra08G0112500' => 'sbr', 'Sabra11G0036800' => 'sbr', 'Sabra11G0103800' => 'sbr', 'Sabra13G0096300' => 'sbr', 'Sabra16G0262300' => 'sbr', 'Sabra18G0091700' => 'sbr', 'Sabra19G0095400' => 'sbr', 'SalBow6G3080' => 'sbo', 'SalBow7G1157' => 'sbo', 'SalBow7G2123' => 'sbo', 'SalBow7G2285' => 'sbo', 'SalBow7G3537' => 'sbo', 'SalBow8G2947' => 'sbo', 'SalBow8G4463' => 'sbo', 'SalBow8G5466' => 'sbo', 'Sc01g0001750' => 'sci', 'Sc02g0006640' => 'sci', 'Sc02g0006670' => 'sci', 'Sc04g0008220' => 'sci', 'Sc05g0006190' => 'sci', 'Sc08g0002760' => 'sci', 'Sc17g0006170' => 'sci', 'Sc22g0002050' => 'sci', 'Sc23g0001190' => 'sci', 'Sc24g0000980' => 'sci', 'Sed0006245' => 'sed', 'Sed0007543' => 'sed', 'Sed0009411' => 'sed', 'Sed0010765' => 'sed', 'Sed0012944' => 'sed', 'Sed0014682' => 'sed', 'Sed0016174' => 'sed', 'Sed0016796' => 'sed', 'Sed0020317' => 'sed', 'Sed0021467' => 'sed', 'SEGI_01316' => 'sgi', 'SEGI_03374' => 'sgi', 'SEGI_16265' => 'sgi', 'SEGI_18569' => 'sgi', 'SEGI_20351' => 'sgi', 'SEGI_26395' => 'sgi', 'SEGI_29469' => 'sgi', 'SEGI_34771' => 'sgi', 'SEGI_36769' => 'sgi', 'SEGI_37139' => 'sgi', 'SGA_v2.0_scaffold100G29687' => 'sas', 'SGA_v2.0_scaffold118G32472' => 'sas', 'SGA_v2.0_scaffold14G07051' => 'sas', 'SGA_v2.0_scaffold183G39845' => 'sas', 'SGA_v2.0_scaffold1G00174' => 'sas', 'SGA_v2.0_scaffold22G09714' => 'sas', 'SGA_v2.0_scaffold333G48992' => 'sas', 'SGA_v2.0_scaffold46G17491' => 'sas', 'SGA_v2.0_scaffold49G18294' => 'sas', 'SGA_v2.0_scaffold63G21658' => 'sas', 'SHI01741' => 'shi', 'SHI05771' => 'shi', 'SHI18077' => 'shi', 'SHI20525' => 'shi', 'SHI20527' => 'shi', 'SHI20528' => 'shi', 'SMO172G0185' => 'smo', 'SMO198G0020' => 'smo', 'SMO351G0006' => 'smo', 'SMO356G0118' => 'smo', 'SMO358G0296' => 'smo', 'SMO367G0079' => 'smo', 'SMO367G1277' => 'smo', 'Solyc01g014220.3' => 'sly', 'Solyc01g111770.2' => 'sly', 'Solyc02g078180.3' => 'sly', 'Solyc03g006430.3' => 'sly', 'Solyc03g006456.1' => 'sly', 'Solyc03g079860.2' => 'sly', 'Solyc04g079770.3' => 'sly', 'Solyc05g007430.4' => 'sly', 'Solyc07g063150.3' => 'sly', 'Solyc08g016620.3' => 'sly', 'Solyc09g057590.3' => 'sly', 'Solyc09g057600.1' => 'sly', 'Solyc10g009050.3' => 'sly', 'Solyc11g017420.2' => 'sly', 'Sopen01g053810' => 'spe', 'Sopen02g023040' => 'spe', 'Sopen03g002440' => 'spe', 'Sopen04g033350' => 'spe', 'Sopen05g003310' => 'spe', 'Sopen07g004050' => 'spe', 'Sopen07g031340' => 'spe', 'Sopen08g006990' => 'spe', 'Sopen10g004830' => 'spe', 'Sopen11g009370' => 'spe', 'Sp1g24450' => 'spa', 'Sp1g29670' => 'spa', 'Sp1g39600' => 'spa', 'Sp2g11080' => 'spa', 'Sp2g13970' => 'spa', 'Sp4g16130' => 'spa', 'Sp6g13080' => 'spa', 'Sp7g37270' => 'spa', 'TAR371G0065' => 'tar', 'TAR376G0340' => 'tar', 'TAR376G0435' => 'tar', 'TAR381G0002' => 'tar', 'TAR381G1236' => 'tar', 'TAR624G0055' => 'tar', 'TAR624G0324' => 'tar', 'TAR624G0696' => 'tar', 'TAR624G0906' => 'tar', 'TAR625G0107' => 'tar', 'TAR626G0015' => 'tar', 'TAR626G1356' => 'tar', 'TAR627G0888' => 'tar', 'TAR628G0399' => 'tar', 'TAR628G1327' => 'tar', 'TAR629G2831' => 'tar', 'TAR629G2874' => 'tar', 'TAR633G1432' => 'tar', 'TAR633G2771' => 'tar', 'THA.LOC104803394' => 'tha', 'THA.LOC104805153' => 'tha', 'THA.LOC104806784' => 'tha', 'THA.LOC104810473' => 'tha', 'THA.LOC104813100' => 'tha', 'THA.LOC104814215' => 'tha', 'THA.LOC104815554' => 'tha', 'THA.LOC104820544' => 'tha', 'THA.LOC104824754' => 'tha', 'THA.LOC104827717' => 'tha', 'Thecc.02G031400' => 'tca', 'Thecc.02G055900' => 'tca', 'Thecc.02G350800' => 'tca', 'Thecc.06G150900' => 'tca', 'Thecc.06G186600' => 'tca', 'Thecc.07G089600' => 'tca', 'Thecc.08G020400' => 'tca', 'Thecc.08G182100' => 'tca', 'Thhalv10000873m.g' => 'esa', 'Thhalv10004185m.g' => 'esa', 'Thhalv10006981m.g' => 'esa', 'Thhalv10007204m.g' => 'esa', 'Thhalv10011374m.g' => 'esa', 'Thhalv10013482m.g' => 'esa', 'Thhalv10017801m.g' => 'esa', 'Thhalv10024983m.g' => 'esa', 'TPR.G12072' => 'tpr', 'TPR.G15769' => 'tpr', 'TPR.G16504' => 'tpr', 'TPR.G16506' => 'tpr', 'TPR.G24345' => 'tpr', 'TPR.G26666' => 'tpr', 'TPR.G27320' => 'tpr', 'TPR.G31819' => 'tpr', 'TPR.G38879' => 'tpr', 'TPR.G39015' => 'tpr', 'TPR.G8819' => 'tpr', 'TWI09G0924' => 'twi', 'TWI12G0811' => 'twi', 'TWI12G1294' => 'twi', 'TWI31G0150' => 'twi', 'TWI36G1262' => 'twi', 'TWI38G1287' => 'twi', 'TWI38G1633' => 'twi', 'TWI38G1982' => 'twi', 'TWI39G0116' => 'twi', 'TWI60G1011' => 'twi', 'TWI63G0171' => 'twi', 'TWI73G0839' => 'twi', 'TWI79G1511' => 'twi', 'unitig_0.g915' => 'ugi', 'unitig_0.g916' => 'ugi', 'unitig_21.g20219' => 'ugi', 'unitig_21.g20416' => 'ugi', 'unitig_578.g16132' => 'ugi', 'unitig_578.g16718' => 'ugi', 'unitig_62.g23481' => 'ugi', 'unitig_744.g24535' => 'ugi', 'unitig_749.g13525' => 'ugi', 'vmacro01248' => 'vma', 'vmacro02290' => 'vma', 'vmacro10946' => 'vma', 'vmacro11865' => 'vma', 'vmacro12493' => 'vma', 'vmacro17322' => 'vma', 'vmacro21599' => 'vma', 'vmacro23041' => 'vma', 'VMungo0251G0004' => 'vmu', 'VMungo0251G2639' => 'vmu', 'VMungo0251G2967' => 'vmu', 'VMungo0540G0864' => 'vmu', 'VMungo0540G1569' => 'vmu', 'VMungo0647G0317' => 'vmu', 'VMungo0720G1373' => 'vmu', 'VMungo0720G1508' => 'vmu', 'VMungo1080G0485' => 'vmu', 'VMungo1215G3177' => 'vmu', 'Zm00001eb112600' => 'zma', 'Zm00001eb120220' => 'zma', 'Zm00001eb153240' => 'zma', 'Zm00001eb168880' => 'zma', 'Zm00001eb213920' => 'zma', 'Zm00001eb228280' => 'zma', 'Zm00001eb254580' => 'zma', 'Zm00001eb272180' => 'zma', 'Zm00001eb293190' => 'zma', 'Zm00001eb322930' => 'zma', 'Zm00001eb353360' => 'zma', 'Zm00001eb353390' => 'zma', 'Zm00001eb353430' => 'zma', 'Zm00001eb353440' => 'zma', 'Zm00001eb353780' => 'zma' ) $gf_id = 'HOM05D000499' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000499' ) $data_identifier = 'HOM05D000499' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 29, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 12, 'amhyb' => (int) 8, 'aly' => (int) 12, 'aox' => (int) 9, 'arhy' => (int) 26, 'ath' => (int) 8, 'atr' => (int) 7, 'acertr' => (int) 10, 'cqu' => (int) 15, 'bca' => (int) 29, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 11, 'cansat' => (int) 8, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 9, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 8, 'cpa' => (int) 10, 'csa' => (int) 7, 'camsi' => (int) 20, 'dca' => (int) 8, 'din' => (int) 12, 'dzi' => (int) 14, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 6, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 38, 'gra' => (int) 16, 'vvi' => (int) 8, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 5, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 11, 'lja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 11, 'mpo' => (int) 3, 'mbi' => (int) 14, 'mdo' => (int) 14, 'mtr' => (int) 8, 'cme' => (int) 9, 'egut' => (int) 9, 'ama' => (int) 11, 'nta' => (int) 17, 'nnu' => (int) 11, 'oeu' => (int) 18, 'osa' => (int) 8, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 6, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 9, 'rsi' => (int) 9, 'sbr' => (int) 10, 'sbo' => (int) 8, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 10, 'sas' => (int) 10, 'shi' => (int) 6, 'smo' => (int) 7, 'sly' => (int) 14, 'spe' => (int) 10, 'spa' => (int) 8, 'tar' => (int) 19, 'tha' => (int) 10, 'tca' => (int) 8, 'esa' => (int) 8, 'tpr' => (int) 11, 'twi' => (int) 13, 'ugi' => (int) 9, 'vma' => (int) 8, 'vmu' => (int) 10, 'zma' => (int) 15 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb353780' $species_info = array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ) $local_species = 'oeu' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000499', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1066', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p29780' => 'bna', 'A02p33180' => 'bna', 'A03p16470' => 'bna', 'A03p66010' => 'bna', 'A04p25970' => 'bna', 'A06p01270' => 'bna', 'A06p46080' => 'bna', 'A07p11400' => 'bna', 'A08p01840' => 'bna', 'A08p08230' => 'bna', 'A08p25740' => 'bna', 'A09p32070' => 'bna', 'A09p37830' => 'bna', 'A09p42840' => 'bna', 'A09p42850' => 'bna', 'Aa31LG10G2060' => 'aar', 'Aa31LG2G7410' => 'aar', 'Aa31LG6G10200' => 'aar', 'Aa31LG6G16680' => 'aar', 'Aa31LG6G8470' => 'aar', 'Aa31LG9G12730' => 'aar', 'Aa31LG9G13680' => 'aar', 'Aa31LG9G14920' => 'aar', 'Aa31LG9G6650' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4977' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5467' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3254' => 'aag', 'Actinidia02578' => 'ach', 'Actinidia07693' => 'ach', 'Actinidia08413' => 'ach', 'Actinidia08414' => 'ach', 'Actinidia15289' => 'ach', 'Actinidia19871' => 'ach', 'Actinidia21475' => 'ach', 'Actinidia22576' => 'ach', 'Actinidia28327' => 'ach', 'Actinidia32491' => 'ach', 'Actinidia39463' => 'ach', 'Actinidia39571' => 'ach', 'Ah.01g013750' => 'amhyb', 'Ah.01g023210' => 'amhyb', 'Ah.04g164850' => 'amhyb', 'Ah.05g178060' => 'amhyb', 'Ah.07g204270' => 'amhyb', 'Ah.07g208480' => 'amhyb', 'Ah.09g237410' => 'amhyb', 'Ah.14g089460' => 'amhyb', 'AL1G41790' => 'aly', 'AL1G49050' => 'aly', 'AL1G53810' => 'aly', 'AL1G61400' => 'aly', 'AL4G18580' => 'aly', 'AL5G12510' => 'aly', 'AL5G12540' => 'aly', 'AL6G43230' => 'aly', 'AL7G10370' => 'aly', 'AL7G19250' => 'aly', 'AL8G12240' => 'aly', 'AL8G18540' => 'aly', 'Aqoxy1G02409' => 'aox', 'Aqoxy2G03993' => 'aox', 'Aqoxy3G03357' => 'aox', 'Aqoxy4G00785' => 'aox', 'Aqoxy5G02598' => 'aox', 'Aqoxy6G00132' => 'aox', 'Aqoxy7G01776' => 'aox', 'Aqoxy7G02316' => 'aox', 'Aqoxy7G03973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.12AFKW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B8730' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27IQR1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3F75VG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3RE0GA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41TCQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.527VTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FIR39' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5W8UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DA38EV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ63HS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H1I32C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HC27T5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4M8AP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7N3CZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9UVDZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LS1NQA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT1D4B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SKC4TM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCFV76' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF9Q1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQWD9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1ZM88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WE07RT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YCK7VH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJE6Q6' => 'arhy', 'AT1G28240' => 'ath', 'AT1G34550' => 'ath', 'AT1G53040' => 'ath', 'AT2G02910' => 'ath', 'AT4G09630' => 'ath', 'AT4G38500' => 'ath', 'AT5G42660' => 'ath', 'AT5G46220' => 'ath', 'ATR0152G026' => 'atr', 'ATR0564G343' => 'atr', 'ATR0706G151' => 'atr', 'ATR0733G207' => 'atr', 'ATR0751G234' => 'atr', 'ATR0807G048' => 'atr', 'ATR1091G084' => 'atr', 'Atru.chr10.1229' => 'acertr', 'Atru.chr10.1230' => 'acertr', 'Atru.chr10.1874' => 'acertr', 'Atru.chr11.1808' => 'acertr', 'Atru.chr13.1795' => 'acertr', 'Atru.chr13.570' => 'acertr', 'Atru.chr2.2608' => 'acertr', 'Atru.chr2.2609' => 'acertr', 'Atru.chr5.3428' => 'acertr', 'Atru.chr8.1171' => 'acertr', 'AUR62004651' => 'cqu', 'AUR62008675' => 'cqu', 'AUR62010014' => 'cqu', 'AUR62013004' => 'cqu', 'AUR62014825' => 'cqu', 'AUR62015015' => 'cqu', 'AUR62015151' => 'cqu', 'AUR62017020' => 'cqu', 'AUR62019422' => 'cqu', 'AUR62023570' => 'cqu', 'AUR62025571' => 'cqu', 'AUR62029098' => 'cqu', 'AUR62033863' => 'cqu', 'AUR62034296' => 'cqu', 'AUR62040075' => 'cqu', 'BcaB02g07334' => 'bca', 'BcaB02g10575' => 'bca', 'BcaB03g12119' => 'bca', 'BcaB03g12120' => 'bca', 'BcaB03g13945' => 'bca', 'BcaB04g17123' => 'bca', 'BcaB04g17867' => 'bca', 'BcaB04g19839' => 'bca', 'BcaB07g30317' => 'bca', 'BcaB07g32432' => 'bca', 'BcaB07g33362' => 'bca', 'BcaB08g36611' => 'bca', 'BcaC01g00028' => 'bca', 'BcaC01g01356' => 'bca', 'BcaC01g02034' => 'bca', 'BcaC01g06051' => 'bca', 'BcaC03g16839' => 'bca', 'BcaC03g17176' => 'bca', 'BcaC05g26829' => 'bca', 'BcaC06g31490' => 'bca', 'BcaC06g35344' => 'bca', 'BcaC06g36570' => 'bca', 'BcaC07g37537' => 'bca', 'BcaC08g43491' => 'bca', 'BcaC08g43773' => 'bca', 'BcaNung00234' => 'bca', 'BcaNung01982' => 'bca', 'BcaNung03707' => 'bca', 'BcaNung06454' => 'bca', 'BolC2t10762H' => 'bol', 'BolC2t11191H' => 'bol', 'BolC3t14322H' => 'bol', 'BolC3t19747H' => 'bol', 'BolC3t21425H' => 'bol', 'BolC4t27800H' => 'bol', 'BolC5t31423H' => 'bol', 'BolC6t35951H' => 'bol', 'BolC6t36282H' => 'bol', 'BolC7t40678H' => 'bol', 'BolC7t40679H' => 'bol', 'BolC7t42222H' => 'bol', 'BolC7t43492H' => 'bol', 'BolC7t46785H' => 'bol', 'BolC8t47853H' => 'bol', 'BolC9t56805H' => 'bol', 'BraA02t08000Z' => 'bra', 'BraA02t08341Z' => 'bra', 'BraA03t10936Z' => 'bra', 'BraA03t15657Z' => 'bra', 'BraA04t18100Z' => 'bra', 'BraA05t20523Z' => 'bra', 'BraA06t23353Z' => 'bra', 'BraA06t27473Z' => 'bra', 'BraA06t27769Z' => 'bra', 'BraA07t28928Z' => 'bra', 'BraA08t32236Z' => 'bra', 'BraA08t32841Z' => 'bra', 'BraA08t34524Z' => 'bra', 'BraA09t38742Z' => 'bra', 'BraA09t39295Z' => 'bra', 'C02p47180' => 'bna', 'C02p50990' => 'bna', 'C03p19360' => 'bna', 'C03p74950' => 'bna', 'C03p91000' => 'bna', 'C04p63260' => 'bna', 'C05p27050' => 'bna', 'C06p08750' => 'bna', 'C06p11490' => 'bna', 'C07p02820' => 'bna', 'C07p17180' => 'bna', 'C07p29440' => 'bna', 'C07p63730' => 'bna', 'C09p39260' => 'bna', 'CAN.G1164.34' => 'can', 'CAN.G1164.39' => 'can', 'CAN.G1530.3' => 'can', 'CAN.G162.61' => 'can', 'CAN.G176.6' => 'can', 'CAN.G289.49' => 'can', 'CAN.G370.21' => 'can', 'CAN.G370.22' => 'can', 'CAN.G371.117' => 'can', 'CAN.G58.37' => 'can', 'CAN.G588.98' => 'can', 'CANSAT21G2266' => 'cansat', 'CANSAT25G2799' => 'cansat', 'CANSAT35G0862' => 'cansat', 'CANSAT35G1704' => 'cansat', 'CANSAT35G1760' => 'cansat', 'CANSAT56G3971' => 'cansat', 'CANSAT56G4116' => 'cansat', 'CANSAT80G1259' => 'cansat', 'CARHR027730' => 'chi', 'CARHR033880' => 'chi', 'CARHR043270' => 'chi', 'CARHR145330' => 'chi', 'CARHR145340' => 'chi', 'CARHR175570' => 'chi', 'CARHR181570' => 'chi', 'CARHR258470' => 'chi', 'CARHR260490' => 'chi', 'CARHR294220' => 'chi', 'Carub.0001s2668' => 'cru', 'Carub.0001s3257' => 'cru', 'Carub.0001s4220' => 'cru', 'Carub.0005s0179' => 'cru', 'Carub.0006s2807' => 'cru', 'Carub.0007s0039' => 'cru', 'Carub.0008s0169' => 'cru', 'Carub.0008s0636' => 'cru', 'Ca_00338_v3' => 'car', 'Ca_00542_v3' => 'car', 'Ca_01844_v3' => 'car', 'Ca_10611_v3' => 'car', 'Ca_13326_v3' => 'car', 'Ca_17944_v3' => 'car', 'Ca_18546_v3' => 'car', 'Ca_24219_v3' => 'car', 'Ca_29972_v3' => 'car', 'CBR_g3681' => 'cbr', 'CBR_g40021' => 'cbr', 'Cc01_g08140' => 'ccan', 'Cc02_g13410' => 'ccan', 'Cc02_g37480' => 'ccan', 'Cc05_g12030' => 'ccan', 'Cc09_g03370' => 'ccan', 'Cc09_g10300' => 'ccan', 'Cc10_g03530' => 'ccan', 'Cc10_g11380' => 'ccan', 'CDE01G0176' => 'cde', 'CDE02G0675' => 'cde', 'CDE02G0942' => 'cde', 'CDE02G1153' => 'cde', 'CDE02G4177' => 'cde', 'CDE04G2117' => 'cde', 'CDE04G2736' => 'cde', 'CDE08G1161' => 'cde', 'CDE09G1238' => 'cde', 'Cfa000467' => 'cfa', 'Cfa000947' => 'cfa', 'Cfa004969' => 'cfa', 'Cfa005284' => 'cfa', 'Cfa008993' => 'cfa', 'Cfa018187' => 'cfa', 'Cfa018454' => 'cfa', 'Cfa020585' => 'cfa', 'Ciclev10000424m.g' => 'ccl', 'Ciclev10003605m.g' => 'ccl', 'Ciclev10007828m.g' => 'ccl', 'Ciclev10014620m.g' => 'ccl', 'Ciclev10015169m.g' => 'ccl', 'Ciclev10018291m.g' => 'ccl', 'Ciclev10028256m.g' => 'ccl', 'Ciclev10033822m.g' => 'ccl', 'CiPaw.05G060300' => 'cil', 'CiPaw.05G085000' => 'cil', 'CiPaw.06G083700' => 'cil', 'CiPaw.06G120300' => 'cil', 'CiPaw.09G060500' => 'cil', 'CiPaw.09G123800' => 'cil', 'CiPaw.11G169700' => 'cil', 'CiPaw.12G118300' => 'cil', 'CiPaw.15G071000' => 'cil', 'CiPaw.15G081900' => 'cil', 'ClCG01G024610' => 'cla', 'ClCG03G006070' => 'cla', 'ClCG05G019250' => 'cla', 'ClCG09G009500' => 'cla', 'ClCG11G008200' => 'cla', 'ClCG11G018080' => 'cla', 'COL.COLO4_17373' => 'col', 'COL.COLO4_22994' => 'col', 'COL.COLO4_26389' => 'col', 'COL.COLO4_27170' => 'col', 'COL.COLO4_31074' => 'col', 'COL.COLO4_31465' => 'col', 'COL.COLO4_36438' => 'col', 'COL.COLO4_36439' => 'col', 'Cpa.g.c38781' => 'cpa', 'Cpa.g.sc128.12' => 'cpa', 'Cpa.g.sc166.7' => 'cpa', 'Cpa.g.sc166.8' => 'cpa', 'Cpa.g.sc20.111' => 'cpa', 'Cpa.g.sc27.31' => 'cpa', 'Cpa.g.sc64.36' => 'cpa', 'Cpa.g.sc64.37' => 'cpa', 'Cpa.g.sc66.49' => 'cpa', 'Cpa.g.sc80.64' => 'cpa', 'CsaV3_1G012320' => 'csa', 'CsaV3_2G008480' => 'csa', 'CsaV3_2G033450' => 'csa', 'CsaV3_3G044830' => 'csa', 'CsaV3_4G033710' => 'csa', 'CsaV3_6G051730' => 'csa', 'CsaV3_7G025350' => 'csa', 'CSS0001067' => 'camsi', 'CSS0005996' => 'camsi', 'CSS0006590' => 'camsi', 'CSS0009673' => 'camsi', 'CSS0010201' => 'camsi', 'CSS0010549' => 'camsi', 'CSS0011364' => 'camsi', 'CSS0014473' => 'camsi', 'CSS0014961' => 'camsi', 'CSS0020191' => 'camsi', 'CSS0021165' => 'camsi', 'CSS0022306' => 'camsi', 'CSS0030591' => 'camsi', 'CSS0030696' => 'camsi', 'CSS0032653' => 'camsi', 'CSS0037487' => 'camsi', 'CSS0041102' => 'camsi', 'CSS0041261' => 'camsi', 'CSS0046246' => 'camsi', 'CSS0049256' => 'camsi', 'DCAR_004075' => 'dca', 'DCAR_011538' => 'dca', 'DCAR_019553' => 'dca', 'DCAR_020952' => 'dca', 'DCAR_021739' => 'dca', 'DCAR_027407' => 'dca', 'DCAR_027913' => 'dca', 'DCAR_028066' => 'dca', 'Dinv05899' => 'din', 'Dinv07563' => 'din', 'Dinv08010' => 'din', 'Dinv14125' => 'din', 'Dinv20172' => 'din', 'Dinv30743' => 'din', 'Dinv31229' => 'din', 'Dinv34162' => 'din', 'Dinv36028' => 'din', 'Dinv39368' => 'din', 'Dinv40565' => 'din', 'Dinv41706' => 'din', 'Duzib052G0089' => 'dzi', 'Duzib116G0641' => 'dzi', 'Duzib132G0069' => 'dzi', 'Duzib132G1219' => 'dzi', 'Duzib147G0278' => 'dzi', 'Duzib160G0480' => 'dzi', 'Duzib170G0661' => 'dzi', 'Duzib177G0591' => 'dzi', 'Duzib187G1353' => 'dzi', 'Duzib192G0858' => 'dzi', 'Duzib192G0883' => 'dzi', 'Duzib213G0506' => 'dzi', 'Duzib235G0289' => 'dzi', 'Duzib251G0422' => 'dzi', 'ECA232G3898' => 'eca', 'ECA233G5950' => 'eca', 'ECA234G1699' => 'eca', 'ECA234G2421' => 'eca', 'ECA236G0426' => 'eca', 'ECA236G4331' => 'eca', 'ECA248G2573' => 'eca', 'EL10Ac1g00077' => 'bvu', 'EL10Ac1g01746' => 'bvu', 'EL10Ac2g03464' => 'bvu', 'EL10Ac4g08176' => 'bvu', 'EL10Ac7g17521' => 'bvu', 'EL10Ac8g20386' => 'bvu', 'EL10Ac9g21343' => 'bvu', 'EL10Ac9g22688' => 'bvu', 'Eucgr.B03434' => 'egr', 'Eucgr.D00618' => 'egr', 'Eucgr.E02395' => 'egr', 'Eucgr.F01129' => 'egr', 'Eucgr.F02622' => 'egr', 'Eucgr.F04207' => 'egr', 'FAN01G0570' => 'fan', 'FAN03G3351' => 'fan', 'FAN06G3702' => 'fan', 'FAN07G2149' => 'fan', 'FAN10G3758' => 'fan', 'FAN11G1170' => 'fan', 'FAN11G2050' => 'fan', 'FAN11G2724' => 'fan', 'FAN12G1700' => 'fan', 'FAN12G2028' => 'fan', 'FAN15G1160' => 'fan', 'FAN15G3063' => 'fan', 'FAN16G2540' => 'fan', 'FAN16G3077' => 'fan', 'FAN16G3624' => 'fan', 'FAN17G0221' => 'fan', 'FAN20G2492' => 'fan', 'FAN20G2905' => 'fan', 'FAN21G0548' => 'fan', 'FAN21G1300' => 'fan', 'FAN22G0077' => 'fan', 'FAN22G1315' => 'fan', 'FAN24G1280' => 'fan', 'FAN24G1445' => 'fan', 'FAN24G3527' => 'fan', 'FAN25G0464' => 'fan', 'FAN25G2885' => 'fan', 'FAN25G3270' => 'fan', 'FAN27G1101' => 'fan', 'FAN27G2846' => 'fan', 'FAN27G3524' => 'fan', 'FvH4_2g11770' => 'fve', 'FvH4_2g15630' => 'fve', 'FvH4_3g05570' => 'fve', 'FvH4_3g09110' => 'fve', 'FvH4_3g19940' => 'fve', 'FvH4_4g04821' => 'fve', 'FvH4_4g31480' => 'fve', 'FvH4_7g01740' => 'fve', 'Glyma.05G130400' => 'gma', 'Glyma.05G156400' => 'gma', 'Glyma.07G197000' => 'gma', 'Glyma.08G085151' => 'gma', 'Glyma.08G114500' => 'gma', 'Glyma.08G300400' => 'gma', 'Glyma.10G215800' => 'gma', 'Glyma.12G224400' => 'gma', 'Glyma.13G179300' => 'gma', 'Glyma.13G218151' => 'gma', 'Glyma.13G238800' => 'gma', 'Glyma.13G276900' => 'gma', 'Glyma.14G078200' => 'gma', 'Glyma.15G074500' => 'gma', 'Glyma.15G094100' => 'gma', 'Glyma.17G247200' => 'gma', 'Glyma.18G120100' => 'gma', 'Glyma.20G176000' => 'gma', 'Gohir.A01G063600' => 'ghi', 'Gohir.A01G170301' => 'ghi', 'Gohir.A02G060500' => 'ghi', 'Gohir.A05G133850' => 'ghi', 'Gohir.A05G161400' => 'ghi', 'Gohir.A06G012900' => 'ghi', 'Gohir.A06G035901' => 'ghi', 'Gohir.A06G127100' => 'ghi', 'Gohir.A06G210500' => 'ghi', 'Gohir.A08G008650' => 'ghi', 'Gohir.A09G072700' => 'ghi', 'Gohir.A09G088301' => 'ghi', 'Gohir.A10G040600' => 'ghi', 'Gohir.A12G036300' => 'ghi', 'Gohir.A12G143350' => 'ghi', 'Gohir.A12G165500' => 'ghi', 'Gohir.A13G145700' => 'ghi', 'Gohir.D01G050000' => 'ghi', 'Gohir.D01G051366' => 'ghi', 'Gohir.D01G161350' => 'ghi', 'Gohir.D02G065900' => 'ghi', 'Gohir.D05G164200' => 'ghi', 'Gohir.D05G355500' => 'ghi', 'Gohir.D06G010400' => 'ghi', 'Gohir.D06G111250' => 'ghi', 'Gohir.D06G132000' => 'ghi', 'Gohir.D06G210500' => 'ghi', 'Gohir.D07G165675' => 'ghi', 'Gohir.D08G062240' => 'ghi', 'Gohir.D08G086101' => 'ghi', 'Gohir.D08G138060' => 'ghi', 'Gohir.D09G072300' => 'ghi', 'Gohir.D10G041400' => 'ghi', 'Gohir.D11G191020' => 'ghi', 'Gohir.D11G212066' => 'ghi', 'Gohir.D12G036300' => 'ghi', 'Gohir.D12G168600' => 'ghi', 'Gohir.D13G150600' => 'ghi', 'Gorai.001G057300' => 'gra', 'Gorai.002G069900' => 'gra', 'Gorai.002G200000' => 'gra', 'Gorai.003G067600' => 'gra', 'Gorai.005G074800' => 'gra', 'Gorai.006G087300' => 'gra', 'Gorai.008G037500' => 'gra', 'Gorai.008G181400' => 'gra', 'Gorai.009G169400' => 'gra', 'Gorai.009G387900' => 'gra', 'Gorai.010G013300' => 'gra', 'Gorai.010G153800' => 'gra', 'Gorai.010G255800' => 'gra', 'Gorai.011G043700' => 'gra', 'Gorai.011G198900' => 'gra', 'Gorai.013G168400' => 'gra', 'GSVIVG01005212001' => 'vvi', 'GSVIVG01006163001' => 'vvi', 'GSVIVG01009625001' => 'vvi', 'GSVIVG01014338001' => 'vvi', 'GSVIVG01020005001' => 'vvi', 'GSVIVG01021450001' => 'vvi', 'GSVIVG01023975001' => 'vvi', 'GSVIVG01034490001' => 'vvi', 'HanXRQChr04g0112071' => 'han', 'HanXRQChr05g0131151' => 'han', 'HanXRQChr09g0262371' => 'han', 'HanXRQChr09g0268401' => 'han', 'HanXRQChr10g0279241' => 'han', 'HanXRQChr10g0297961' => 'han', 'HanXRQChr11g0326231' => 'han', 'HanXRQChr11g0328471' => 'han', 'HanXRQChr16g0507941' => 'han', 'HanXRQChr17g0560211' => 'han', 'Haze_02108' => 'cav', 'Haze_02428' => 'cav', 'Haze_05593' => 'cav', 'Haze_06448' => 'cav', 'Haze_09427' => 'cav', 'Haze_12022' => 'cav', 'Haze_17612' => 'cav', 'Haze_17928' => 'cav', 'Hma1.2p1_0032F.1_g019250' => 'hma', 'Hma1.2p1_0163F.1_g072690' => 'hma', 'Hma1.2p1_0265F.1_g106710' => 'hma', 'Hma1.2p1_0286F.1_g113970' => 'hma', 'Hma1.2p1_0363F.1_g136640' => 'hma', 'Hma1.2p1_0584F.1_g183470' => 'hma', 'Hma1.2p1_0885F.1_g232570' => 'hma', 'HPP92_006022' => 'vpl', 'HPP92_007320' => 'vpl', 'HPP92_011521' => 'vpl', 'HPP92_019387' => 'vpl', 'HPP92_024038' => 'vpl', 'Hund05891' => 'sun', 'Hund06450' => 'sun', 'Hund12053' => 'sun', 'Hund16800' => 'sun', 'Hund21222' => 'sun', 'Hund22896' => 'sun', 'Hund23746' => 'sun', 'Hund27083' => 'sun', 'Lalb_Chr02g0141831' => 'lal', 'Lalb_Chr02g0141841' => 'lal', 'Lalb_Chr05g0220411' => 'lal', 'Lalb_Chr06g0162081' => 'lal', 'Lalb_Chr09g0327651' => 'lal', 'Lalb_Chr13g0295051' => 'lal', 'Lalb_Chr15g0086801' => 'lal', 'Lalb_Chr16g0383781' => 'lal', 'Lalb_Chr16g0383791' => 'lal', 'Lalb_Chr18g0055441' => 'lal', 'Lalb_Chr18g0059611' => 'lal', 'Lalb_Chr20g0109661' => 'lal', 'Lalb_Chr20g0109831' => 'lal', 'Lalb_Chr20g0121871' => 'lal', 'Lalb_Chr22g0355361' => 'lal', 'Lalb_Chr25g0286371' => 'lal', 'Lj1A1187G43' => 'lonja', 'Lj1A1205T50' => 'lonja', 'Lj1A800G33' => 'lonja', 'Lj1C1187T7' => 'lonja', 'Lj1C843T11' => 'lonja', 'Lj1g0010940' => 'lja', 'Lj2A288T69' => 'lonja', 'Lj3g0024276' => 'lja', 'Lj4A47T76' => 'lonja', 'Lj4g0005805' => 'lja', 'Lj4g0006097' => 'lja', 'Lj4g0008528' => 'lja', 'Lj4g0024907' => 'lja', 'Lj5g0012472' => 'lja', 'Lj5g0018648' => 'lja', 'Lj6C789G1' => 'lonja', 'Lj6g0004000' => 'lja', 'Lj7A292G67' => 'lonja', 'Lj7A292T64' => 'lonja', 'Lj9A400T58' => 'lonja', 'Lsat_1_v5_gn_1_126181' => 'lsa', 'Lsat_1_v5_gn_4_123041' => 'lsa', 'Lsat_1_v5_gn_4_133620' => 'lsa', 'Lsat_1_v5_gn_4_53221' => 'lsa', 'Lsat_1_v5_gn_4_71961' => 'lsa', 'Lsat_1_v5_gn_7_105241' => 'lsa', 'Lsat_1_v5_gn_7_21361' => 'lsa', 'Lsat_1_v5_gn_7_28860' => 'lsa', 'Lsat_1_v5_gn_7_31260' => 'lsa', 'Lsat_1_v5_gn_8_52801' => 'lsa', 'Manes.02G191400' => 'mes', 'Manes.03G110100' => 'mes', 'Manes.04G071100' => 'mes', 'Manes.05G100500' => 'mes', 'Manes.05G164700' => 'mes', 'Manes.15G087000' => 'mes', 'Manes.15G121500' => 'mes', 'Manes.16G028300' => 'mes', 'Manes.17G046100' => 'mes', 'Manes.17G069800' => 'mes', 'Manes.18G100500' => 'mes', 'Mapoly0002s0109' => 'mpo', 'Mapoly0024s0007' => 'mpo', 'Mapoly0089s0032' => 'mpo', 'MBI04_g42241_MAGBIO' => 'mbi', 'MBI05_g11988_MAGBIO' => 'mbi', 'MBI05_g35452_MAGBIO' => 'mbi', 'MBI07_g30179_MAGBIO' => 'mbi', 'MBI07_g35859_MAGBIO' => 'mbi', 'MBI07_g35860_MAGBIO' => 'mbi', 'MBI07_g37166_MAGBIO' => 'mbi', 'MBI08_g18172_MAGBIO' => 'mbi', 'MBI09_g08441_MAGBIO' => 'mbi', 'MBI13_g01676_MAGBIO' => 'mbi', 'MBI14_g42955_MAGBIO' => 'mbi', 'MBI16_g13161_MAGBIO' => 'mbi', 'MBI17_g27204_MAGBIO' => 'mbi', 'MBI19_g21595_MAGBIO' => 'mbi', 'MD00G1148400' => 'mdo', 'MD02G1301200' => 'mdo', 'MD03G1227800' => 'mdo', 'MD05G1041100' => 'mdo', 'MD05G1124800' => 'mdo', 'MD05G1284000' => 'mdo', 'MD05G1338800' => 'mdo', 'MD05G1338900' => 'mdo', 'MD07G1022800' => 'mdo', 'MD10G1047500' => 'mdo', 'MD10G1127500' => 'mdo', 'MD10G1262300' => 'mdo', 'MD10G1293800' => 'mdo', 'MD16G1074300' => 'mdo', 'Medtr1g021670' => 'mtr', 'Medtr1g096320' => 'mtr', 'Medtr2g013690' => 'mtr', 'Medtr2g019450' => 'mtr', 'Medtr2g085170' => 'mtr', 'Medtr4g088785' => 'mtr', 'Medtr8g055930' => 'mtr', 'Medtr8g085850' => 'mtr', 'MELO3C002605.2' => 'cme', 'MELO3C003891.2' => 'cme', 'MELO3C004012.2' => 'cme', 'MELO3C007134.2' => 'cme', 'MELO3C008118.2' => 'cme', 'MELO3C016700.2' => 'cme', 'MELO3C024127.2' => 'cme', 'MELO3C033361.2' => 'cme', 'MELO3C033362.2' => 'cme', 'Migut.C00430' => 'egut', 'Migut.C01246' => 'egut', 'Migut.E00101' => 'egut', 'Migut.H01486' => 'egut', 'Migut.H01939' => 'egut', 'Migut.K00360' => 'egut', 'Migut.M00910' => 'egut', 'Migut.M01139' => 'egut', 'Migut.N02677' => 'egut', 'MSTRG.13252' => 'ama', 'MSTRG.14701' => 'ama', 'MSTRG.1521' => 'ama', 'MSTRG.15884' => 'ama', 'MSTRG.16242' => 'ama', 'MSTRG.22285' => 'ama', 'MSTRG.22444' => 'ama', 'MSTRG.2349' => 'ama', 'MSTRG.26308' => 'ama', 'MSTRG.28296' => 'ama', 'MSTRG.9895' => 'ama', 'Nitab4.5_0000110g0060' => 'nta', 'Nitab4.5_0000420g0130' => 'nta', 'Nitab4.5_0000422g0030' => 'nta', 'Nitab4.5_0000560g0180' => 'nta', 'Nitab4.5_0000703g0100' => 'nta', 'Nitab4.5_0000786g0200' => 'nta', 'Nitab4.5_0001336g0020' => 'nta', 'Nitab4.5_0001796g0030' => 'nta', 'Nitab4.5_0003348g0060' => 'nta', 'Nitab4.5_0003698g0040' => 'nta', 'Nitab4.5_0003942g0090' => 'nta', 'Nitab4.5_0004775g0070' => 'nta', 'Nitab4.5_0004864g0030' => 'nta', 'Nitab4.5_0005615g0020' => 'nta', 'Nitab4.5_0009288g0030' => 'nta', 'Nitab4.5_0009341g0010' => 'nta', 'Nitab4.5_0009535g0010' => 'nta', 'Nn1g03995' => 'nnu', 'Nn1g04100' => 'nnu', 'Nn1g06530' => 'nnu', 'Nn3g16404' => 'nnu', 'Nn3g17212' => 'nnu', 'Nn3g20776' => 'nnu', 'Nn3g21923' => 'nnu', 'Nn5g27737' => 'nnu', 'Nn5g29461' => 'nnu', 'Nn7g38355' => 'nnu', 'Nn8g39873' => 'nnu', 'Oeu000548.2' => 'oeu', 'Oeu004672.1' => 'oeu', 'Oeu015605.2' => 'oeu', 'Oeu016092.1' => 'oeu', 'Oeu017879.3' => 'oeu', 'Oeu024910.1' => 'oeu', 'Oeu028965.1' => 'oeu', 'Oeu031269.1' => 'oeu', 'Oeu031270.1' => 'oeu', 'Oeu032535.1' => 'oeu', 'Oeu034151.1' => 'oeu', 'Oeu034152.1' => 'oeu', 'Oeu034588.2' => 'oeu', 'Oeu050846.1' => 'oeu', 'Oeu050849.2' => 'oeu', 'Oeu051063.2' => 'oeu', 'Oeu052368.1' => 'oeu', 'Oeu052370.1' => 'oeu', 'Os01g0210400' => 'osa', 'Os01g0304300' => 'osa', 'Os01g0749100' => 'osa', 'Os02g0745800' => 'osa', 'Os03g0769050' => 'osa', 'Os05g0531500' => 'osa', 'Os06g0724300' => 'osa', 'Os11g0198100' => 'osa', 'Peaxi162Scf00069g01425' => 'pax', 'Peaxi162Scf00280g00811' => 'pax', 'Peaxi162Scf00310g00615' => 'pax', 'Peaxi162Scf00362g00542' => 'pax', 'Peaxi162Scf00461g00310' => 'pax', 'Peaxi162Scf00530g00118' => 'pax', 'Peaxi162Scf00541g00057' => 'pax', 'Peaxi162Scf00661g00017' => 'pax', 'Peaxi162Scf00926g00027' => 'pax', 'Peaxi162Scf01064g00263' => 'pax', 'Peaxi162Scf01211g00135' => 'pax', 'PGR004G2336' => 'pgr', 'PGR042G0327' => 'pgr', 'PGR042G1957' => 'pgr', 'PGR042G2003' => 'pgr', 'PGR042G3929' => 'pgr', 'PGR083G1137' => 'pgr', 'PGR083G1364' => 'pgr', 'PGSC0003DMG400003381' => 'stu', 'PGSC0003DMG400003417' => 'stu', 'PGSC0003DMG400008981' => 'stu', 'PGSC0003DMG400012417' => 'stu', 'PGSC0003DMG400012823' => 'stu', 'PGSC0003DMG400016885' => 'stu', 'PGSC0003DMG400022812' => 'stu', 'PGSC0003DMG400029726' => 'stu', 'PGSC0003DMG401009243' => 'stu', 'PGSC0003DMG401031505' => 'stu', 'PGSC0003DMG402031505' => 'stu', 'Phvul.001G017600' => 'pvu', 'Phvul.002G193500' => 'pvu', 'Phvul.002G228900' => 'pvu', 'Phvul.002G236800' => 'pvu', 'Phvul.003G049500' => 'pvu', 'Phvul.005G072000' => 'pvu', 'Phvul.006G164800' => 'pvu', 'Phvul.006G185100' => 'pvu', 'Phvul.007G090000' => 'pvu', 'Potri.001G399800' => 'ptr', 'Potri.002G149900' => 'ptr', 'Potri.004G044100' => 'ptr', 'Potri.004G177600' => 'ptr', 'Potri.009G138000' => 'ptr', 'Potri.010G094000' => 'ptr', 'Potri.011G053000' => 'ptr', 'Potri.011G119300' => 'ptr', 'Potri.013G113700' => 'ptr', 'Potri.018G107800' => 'ptr', 'Potri.019G084100' => 'ptr', 'Pp3c14_23720' => 'ppa', 'Pp3c16_6340' => 'ppa', 'Pp3c23_13420' => 'ppa', 'Pp3c24_2740' => 'ppa', 'Pp3c25_860' => 'ppa', 'Pp3c8_21750' => 'ppa', 'Prupe.1G273000' => 'ppe', 'Prupe.1G273700' => 'ppe', 'Prupe.1G274100' => 'ppe', 'Prupe.2G023300' => 'ppe', 'Prupe.4G048000' => 'ppe', 'Prupe.4G080400' => 'ppe', 'Prupe.4G181200' => 'ppe', 'Prupe.8G056900' => 'ppe', 'Prupe.8G168700' => 'ppe', 'Psat1g189080' => 'psa', 'Psat1g204760' => 'psa', 'Psat4g175560' => 'psa', 'Psat4g177720' => 'psa', 'Psat5g244240' => 'psa', 'Psat6g010720' => 'psa', 'Psat6g187200' => 'psa', 'Psat7g072040' => 'psa', 'PSO017G3501' => 'pso', 'PSO063G2148' => 'pso', 'PSO063G5608' => 'pso', 'PSO210G6392' => 'pso', 'PSO541G2319' => 'pso', 'PSO541G2836' => 'pso', 'PSO541G4012' => 'pso', 'PSO541G6253' => 'pso', 'PSO675G0580' => 'pso', 'PSO675G0856' => 'pso', 'PSO675G5635' => 'pso', 'PSO675G9157' => 'pso', 'PSO832G1660' => 'pso', 'PSO832G1969' => 'pso', 'QL02p007186' => 'qlo', 'QL02p033904' => 'qlo', 'QL03p064391' => 'qlo', 'QL05p040593' => 'qlo', 'QL05p058242' => 'qlo', 'QL08p021825' => 'qlo', 'QL11p004981' => 'qlo', 'RcHm_v2.0_Chr1g0318301' => 'rch', 'RcHm_v2.0_Chr4g0418501' => 'rch', 'RcHm_v2.0_Chr4g0439971' => 'rch', 'RcHm_v2.0_Chr5g0008541' => 'rch', 'RcHm_v2.0_Chr5g0014101' => 'rch', 'RcHm_v2.0_Chr5g0014131' => 'rch', 'RcHm_v2.0_Chr5g0033621' => 'rch', 'RcHm_v2.0_Chr6g0272041' => 'rch', 'RcHm_v2.0_Chr6g0278831' => 'rch', 'Rhsim02G0130400' => 'rsi', 'Rhsim02G0171100' => 'rsi', 'Rhsim05G0053000' => 'rsi', 'Rhsim05G0053100' => 'rsi', 'Rhsim06G0096500' => 'rsi', 'Rhsim06G0096600' => 'rsi', 'Rhsim06G0199100' => 'rsi', 'Rhsim12G0062300' => 'rsi', 'Rhsim12G0062800' => 'rsi', 'Sabra02G0118600' => 'sbr', 'Sabra04G0027300' => 'sbr', 'Sabra04G0119500' => 'sbr', 'Sabra08G0112500' => 'sbr', 'Sabra11G0036800' => 'sbr', 'Sabra11G0103800' => 'sbr', 'Sabra13G0096300' => 'sbr', 'Sabra16G0262300' => 'sbr', 'Sabra18G0091700' => 'sbr', 'Sabra19G0095400' => 'sbr', 'SalBow6G3080' => 'sbo', 'SalBow7G1157' => 'sbo', 'SalBow7G2123' => 'sbo', 'SalBow7G2285' => 'sbo', 'SalBow7G3537' => 'sbo', 'SalBow8G2947' => 'sbo', 'SalBow8G4463' => 'sbo', 'SalBow8G5466' => 'sbo', 'Sc01g0001750' => 'sci', 'Sc02g0006640' => 'sci', 'Sc02g0006670' => 'sci', 'Sc04g0008220' => 'sci', 'Sc05g0006190' => 'sci', 'Sc08g0002760' => 'sci', 'Sc17g0006170' => 'sci', 'Sc22g0002050' => 'sci', 'Sc23g0001190' => 'sci', 'Sc24g0000980' => 'sci', 'Sed0006245' => 'sed', 'Sed0007543' => 'sed', 'Sed0009411' => 'sed', 'Sed0010765' => 'sed', 'Sed0012944' => 'sed', 'Sed0014682' => 'sed', 'Sed0016174' => 'sed', 'Sed0016796' => 'sed', 'Sed0020317' => 'sed', 'Sed0021467' => 'sed', 'SEGI_01316' => 'sgi', 'SEGI_03374' => 'sgi', 'SEGI_16265' => 'sgi', 'SEGI_18569' => 'sgi', 'SEGI_20351' => 'sgi', 'SEGI_26395' => 'sgi', 'SEGI_29469' => 'sgi', 'SEGI_34771' => 'sgi', 'SEGI_36769' => 'sgi', 'SEGI_37139' => 'sgi', 'SGA_v2.0_scaffold100G29687' => 'sas', 'SGA_v2.0_scaffold118G32472' => 'sas', 'SGA_v2.0_scaffold14G07051' => 'sas', 'SGA_v2.0_scaffold183G39845' => 'sas', 'SGA_v2.0_scaffold1G00174' => 'sas', 'SGA_v2.0_scaffold22G09714' => 'sas', 'SGA_v2.0_scaffold333G48992' => 'sas', 'SGA_v2.0_scaffold46G17491' => 'sas', 'SGA_v2.0_scaffold49G18294' => 'sas', 'SGA_v2.0_scaffold63G21658' => 'sas', 'SHI01741' => 'shi', 'SHI05771' => 'shi', 'SHI18077' => 'shi', 'SHI20525' => 'shi', 'SHI20527' => 'shi', 'SHI20528' => 'shi', 'SMO172G0185' => 'smo', 'SMO198G0020' => 'smo', 'SMO351G0006' => 'smo', 'SMO356G0118' => 'smo', 'SMO358G0296' => 'smo', 'SMO367G0079' => 'smo', 'SMO367G1277' => 'smo', 'Solyc01g014220.3' => 'sly', 'Solyc01g111770.2' => 'sly', 'Solyc02g078180.3' => 'sly', 'Solyc03g006430.3' => 'sly', 'Solyc03g006456.1' => 'sly', 'Solyc03g079860.2' => 'sly', 'Solyc04g079770.3' => 'sly', 'Solyc05g007430.4' => 'sly', 'Solyc07g063150.3' => 'sly', 'Solyc08g016620.3' => 'sly', 'Solyc09g057590.3' => 'sly', 'Solyc09g057600.1' => 'sly', 'Solyc10g009050.3' => 'sly', 'Solyc11g017420.2' => 'sly', 'Sopen01g053810' => 'spe', 'Sopen02g023040' => 'spe', 'Sopen03g002440' => 'spe', 'Sopen04g033350' => 'spe', 'Sopen05g003310' => 'spe', 'Sopen07g004050' => 'spe', 'Sopen07g031340' => 'spe', 'Sopen08g006990' => 'spe', 'Sopen10g004830' => 'spe', 'Sopen11g009370' => 'spe', 'Sp1g24450' => 'spa', 'Sp1g29670' => 'spa', 'Sp1g39600' => 'spa', 'Sp2g11080' => 'spa', 'Sp2g13970' => 'spa', 'Sp4g16130' => 'spa', 'Sp6g13080' => 'spa', 'Sp7g37270' => 'spa', 'TAR371G0065' => 'tar', 'TAR376G0340' => 'tar', 'TAR376G0435' => 'tar', 'TAR381G0002' => 'tar', 'TAR381G1236' => 'tar', 'TAR624G0055' => 'tar', 'TAR624G0324' => 'tar', 'TAR624G0696' => 'tar', 'TAR624G0906' => 'tar', 'TAR625G0107' => 'tar', 'TAR626G0015' => 'tar', 'TAR626G1356' => 'tar', 'TAR627G0888' => 'tar', 'TAR628G0399' => 'tar', 'TAR628G1327' => 'tar', 'TAR629G2831' => 'tar', 'TAR629G2874' => 'tar', 'TAR633G1432' => 'tar', 'TAR633G2771' => 'tar', 'THA.LOC104803394' => 'tha', 'THA.LOC104805153' => 'tha', 'THA.LOC104806784' => 'tha', 'THA.LOC104810473' => 'tha', 'THA.LOC104813100' => 'tha', 'THA.LOC104814215' => 'tha', 'THA.LOC104815554' => 'tha', 'THA.LOC104820544' => 'tha', 'THA.LOC104824754' => 'tha', 'THA.LOC104827717' => 'tha', 'Thecc.02G031400' => 'tca', 'Thecc.02G055900' => 'tca', 'Thecc.02G350800' => 'tca', 'Thecc.06G150900' => 'tca', 'Thecc.06G186600' => 'tca', 'Thecc.07G089600' => 'tca', 'Thecc.08G020400' => 'tca', 'Thecc.08G182100' => 'tca', 'Thhalv10000873m.g' => 'esa', 'Thhalv10004185m.g' => 'esa', 'Thhalv10006981m.g' => 'esa', 'Thhalv10007204m.g' => 'esa', 'Thhalv10011374m.g' => 'esa', 'Thhalv10013482m.g' => 'esa', 'Thhalv10017801m.g' => 'esa', 'Thhalv10024983m.g' => 'esa', 'TPR.G12072' => 'tpr', 'TPR.G15769' => 'tpr', 'TPR.G16504' => 'tpr', 'TPR.G16506' => 'tpr', 'TPR.G24345' => 'tpr', 'TPR.G26666' => 'tpr', 'TPR.G27320' => 'tpr', 'TPR.G31819' => 'tpr', 'TPR.G38879' => 'tpr', 'TPR.G39015' => 'tpr', 'TPR.G8819' => 'tpr', 'TWI09G0924' => 'twi', 'TWI12G0811' => 'twi', 'TWI12G1294' => 'twi', 'TWI31G0150' => 'twi', 'TWI36G1262' => 'twi', 'TWI38G1287' => 'twi', 'TWI38G1633' => 'twi', 'TWI38G1982' => 'twi', 'TWI39G0116' => 'twi', 'TWI60G1011' => 'twi', 'TWI63G0171' => 'twi', 'TWI73G0839' => 'twi', 'TWI79G1511' => 'twi', 'unitig_0.g915' => 'ugi', 'unitig_0.g916' => 'ugi', 'unitig_21.g20219' => 'ugi', 'unitig_21.g20416' => 'ugi', 'unitig_578.g16132' => 'ugi', 'unitig_578.g16718' => 'ugi', 'unitig_62.g23481' => 'ugi', 'unitig_744.g24535' => 'ugi', 'unitig_749.g13525' => 'ugi', 'vmacro01248' => 'vma', 'vmacro02290' => 'vma', 'vmacro10946' => 'vma', 'vmacro11865' => 'vma', 'vmacro12493' => 'vma', 'vmacro17322' => 'vma', 'vmacro21599' => 'vma', 'vmacro23041' => 'vma', 'VMungo0251G0004' => 'vmu', 'VMungo0251G2639' => 'vmu', 'VMungo0251G2967' => 'vmu', 'VMungo0540G0864' => 'vmu', 'VMungo0540G1569' => 'vmu', 'VMungo0647G0317' => 'vmu', 'VMungo0720G1373' => 'vmu', 'VMungo0720G1508' => 'vmu', 'VMungo1080G0485' => 'vmu', 'VMungo1215G3177' => 'vmu', 'Zm00001eb112600' => 'zma', 'Zm00001eb120220' => 'zma', 'Zm00001eb153240' => 'zma', 'Zm00001eb168880' => 'zma', 'Zm00001eb213920' => 'zma', 'Zm00001eb228280' => 'zma', 'Zm00001eb254580' => 'zma', 'Zm00001eb272180' => 'zma', 'Zm00001eb293190' => 'zma', 'Zm00001eb322930' => 'zma', 'Zm00001eb353360' => 'zma', 'Zm00001eb353390' => 'zma', 'Zm00001eb353430' => 'zma', 'Zm00001eb353440' => 'zma', 'Zm00001eb353780' => 'zma' ), 'gf_id' => 'HOM05D000499', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000499' ), 'data_identifier' => 'HOM05D000499', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000499', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1066', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p29780' => 'bna', 'A02p33180' => 'bna', 'A03p16470' => 'bna', 'A03p66010' => 'bna', 'A04p25970' => 'bna', 'A06p01270' => 'bna', 'A06p46080' => 'bna', 'A07p11400' => 'bna', 'A08p01840' => 'bna', 'A08p08230' => 'bna', 'A08p25740' => 'bna', 'A09p32070' => 'bna', 'A09p37830' => 'bna', 'A09p42840' => 'bna', 'A09p42850' => 'bna', 'Aa31LG10G2060' => 'aar', 'Aa31LG2G7410' => 'aar', 'Aa31LG6G10200' => 'aar', 'Aa31LG6G16680' => 'aar', 'Aa31LG6G8470' => 'aar', 'Aa31LG9G12730' => 'aar', 'Aa31LG9G13680' => 'aar', 'Aa31LG9G14920' => 'aar', 'Aa31LG9G6650' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4977' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5467' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3254' => 'aag', 'Actinidia02578' => 'ach', 'Actinidia07693' => 'ach', 'Actinidia08413' => 'ach', 'Actinidia08414' => 'ach', 'Actinidia15289' => 'ach', 'Actinidia19871' => 'ach', 'Actinidia21475' => 'ach', 'Actinidia22576' => 'ach', 'Actinidia28327' => 'ach', 'Actinidia32491' => 'ach', 'Actinidia39463' => 'ach', 'Actinidia39571' => 'ach', 'Ah.01g013750' => 'amhyb', 'Ah.01g023210' => 'amhyb', 'Ah.04g164850' => 'amhyb', 'Ah.05g178060' => 'amhyb', 'Ah.07g204270' => 'amhyb', 'Ah.07g208480' => 'amhyb', 'Ah.09g237410' => 'amhyb', 'Ah.14g089460' => 'amhyb', 'AL1G41790' => 'aly', 'AL1G49050' => 'aly', 'AL1G53810' => 'aly', 'AL1G61400' => 'aly', 'AL4G18580' => 'aly', 'AL5G12510' => 'aly', 'AL5G12540' => 'aly', 'AL6G43230' => 'aly', 'AL7G10370' => 'aly', 'AL7G19250' => 'aly', 'AL8G12240' => 'aly', 'AL8G18540' => 'aly', 'Aqoxy1G02409' => 'aox', 'Aqoxy2G03993' => 'aox', 'Aqoxy3G03357' => 'aox', 'Aqoxy4G00785' => 'aox', 'Aqoxy5G02598' => 'aox', 'Aqoxy6G00132' => 'aox', 'Aqoxy7G01776' => 'aox', 'Aqoxy7G02316' => 'aox', 'Aqoxy7G03973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.12AFKW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B8730' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27IQR1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3F75VG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3RE0GA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41TCQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.527VTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FIR39' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5W8UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DA38EV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ63HS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H1I32C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HC27T5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4M8AP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7N3CZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9UVDZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LS1NQA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT1D4B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SKC4TM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCFV76' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF9Q1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQWD9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1ZM88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WE07RT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YCK7VH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJE6Q6' => 'arhy', 'AT1G28240' => 'ath', 'AT1G34550' => 'ath', 'AT1G53040' => 'ath', 'AT2G02910' => 'ath', 'AT4G09630' => 'ath', 'AT4G38500' => 'ath', 'AT5G42660' => 'ath', 'AT5G46220' => 'ath', 'ATR0152G026' => 'atr', 'ATR0564G343' => 'atr', 'ATR0706G151' => 'atr', 'ATR0733G207' => 'atr', 'ATR0751G234' => 'atr', 'ATR0807G048' => 'atr', 'ATR1091G084' => 'atr', 'Atru.chr10.1229' => 'acertr', 'Atru.chr10.1230' => 'acertr', 'Atru.chr10.1874' => 'acertr', 'Atru.chr11.1808' => 'acertr', 'Atru.chr13.1795' => 'acertr', 'Atru.chr13.570' => 'acertr', 'Atru.chr2.2608' => 'acertr', 'Atru.chr2.2609' => 'acertr', 'Atru.chr5.3428' => 'acertr', 'Atru.chr8.1171' => 'acertr', 'AUR62004651' => 'cqu', 'AUR62008675' => 'cqu', 'AUR62010014' => 'cqu', 'AUR62013004' => 'cqu', 'AUR62014825' => 'cqu', 'AUR62015015' => 'cqu', 'AUR62015151' => 'cqu', 'AUR62017020' => 'cqu', 'AUR62019422' => 'cqu', 'AUR62023570' => 'cqu', 'AUR62025571' => 'cqu', 'AUR62029098' => 'cqu', 'AUR62033863' => 'cqu', 'AUR62034296' => 'cqu', 'AUR62040075' => 'cqu', 'BcaB02g07334' => 'bca', 'BcaB02g10575' => 'bca', 'BcaB03g12119' => 'bca', 'BcaB03g12120' => 'bca', 'BcaB03g13945' => 'bca', 'BcaB04g17123' => 'bca', 'BcaB04g17867' => 'bca', 'BcaB04g19839' => 'bca', 'BcaB07g30317' => 'bca', 'BcaB07g32432' => 'bca', 'BcaB07g33362' => 'bca', 'BcaB08g36611' => 'bca', 'BcaC01g00028' => 'bca', 'BcaC01g01356' => 'bca', 'BcaC01g02034' => 'bca', 'BcaC01g06051' => 'bca', 'BcaC03g16839' => 'bca', 'BcaC03g17176' => 'bca', 'BcaC05g26829' => 'bca', 'BcaC06g31490' => 'bca', 'BcaC06g35344' => 'bca', 'BcaC06g36570' => 'bca', 'BcaC07g37537' => 'bca', 'BcaC08g43491' => 'bca', 'BcaC08g43773' => 'bca', 'BcaNung00234' => 'bca', 'BcaNung01982' => 'bca', 'BcaNung03707' => 'bca', 'BcaNung06454' => 'bca', 'BolC2t10762H' => 'bol', 'BolC2t11191H' => 'bol', 'BolC3t14322H' => 'bol', 'BolC3t19747H' => 'bol', 'BolC3t21425H' => 'bol', 'BolC4t27800H' => 'bol', 'BolC5t31423H' => 'bol', 'BolC6t35951H' => 'bol', 'BolC6t36282H' => 'bol', 'BolC7t40678H' => 'bol', 'BolC7t40679H' => 'bol', 'BolC7t42222H' => 'bol', 'BolC7t43492H' => 'bol', 'BolC7t46785H' => 'bol', 'BolC8t47853H' => 'bol', 'BolC9t56805H' => 'bol', 'BraA02t08000Z' => 'bra', 'BraA02t08341Z' => 'bra', 'BraA03t10936Z' => 'bra', 'BraA03t15657Z' => 'bra', 'BraA04t18100Z' => 'bra', 'BraA05t20523Z' => 'bra', 'BraA06t23353Z' => 'bra', 'BraA06t27473Z' => 'bra', 'BraA06t27769Z' => 'bra', 'BraA07t28928Z' => 'bra', 'BraA08t32236Z' => 'bra', 'BraA08t32841Z' => 'bra', 'BraA08t34524Z' => 'bra', 'BraA09t38742Z' => 'bra', 'BraA09t39295Z' => 'bra', 'C02p47180' => 'bna', 'C02p50990' => 'bna', 'C03p19360' => 'bna', 'C03p74950' => 'bna', 'C03p91000' => 'bna', 'C04p63260' => 'bna', 'C05p27050' => 'bna', 'C06p08750' => 'bna', 'C06p11490' => 'bna', 'C07p02820' => 'bna', 'C07p17180' => 'bna', 'C07p29440' => 'bna', 'C07p63730' => 'bna', 'C09p39260' => 'bna', 'CAN.G1164.34' => 'can', 'CAN.G1164.39' => 'can', 'CAN.G1530.3' => 'can', 'CAN.G162.61' => 'can', 'CAN.G176.6' => 'can', 'CAN.G289.49' => 'can', 'CAN.G370.21' => 'can', 'CAN.G370.22' => 'can', 'CAN.G371.117' => 'can', 'CAN.G58.37' => 'can', 'CAN.G588.98' => 'can', 'CANSAT21G2266' => 'cansat', 'CANSAT25G2799' => 'cansat', 'CANSAT35G0862' => 'cansat', 'CANSAT35G1704' => 'cansat', 'CANSAT35G1760' => 'cansat', 'CANSAT56G3971' => 'cansat', 'CANSAT56G4116' => 'cansat', 'CANSAT80G1259' => 'cansat', 'CARHR027730' => 'chi', 'CARHR033880' => 'chi', 'CARHR043270' => 'chi', 'CARHR145330' => 'chi', 'CARHR145340' => 'chi', 'CARHR175570' => 'chi', 'CARHR181570' => 'chi', 'CARHR258470' => 'chi', 'CARHR260490' => 'chi', 'CARHR294220' => 'chi', 'Carub.0001s2668' => 'cru', 'Carub.0001s3257' => 'cru', 'Carub.0001s4220' => 'cru', 'Carub.0005s0179' => 'cru', 'Carub.0006s2807' => 'cru', 'Carub.0007s0039' => 'cru', 'Carub.0008s0169' => 'cru', 'Carub.0008s0636' => 'cru', 'Ca_00338_v3' => 'car', 'Ca_00542_v3' => 'car', 'Ca_01844_v3' => 'car', 'Ca_10611_v3' => 'car', 'Ca_13326_v3' => 'car', 'Ca_17944_v3' => 'car', 'Ca_18546_v3' => 'car', 'Ca_24219_v3' => 'car', 'Ca_29972_v3' => 'car', 'CBR_g3681' => 'cbr', 'CBR_g40021' => 'cbr', 'Cc01_g08140' => 'ccan', 'Cc02_g13410' => 'ccan', 'Cc02_g37480' => 'ccan', 'Cc05_g12030' => 'ccan', 'Cc09_g03370' => 'ccan', 'Cc09_g10300' => 'ccan', 'Cc10_g03530' => 'ccan', 'Cc10_g11380' => 'ccan', 'CDE01G0176' => 'cde', 'CDE02G0675' => 'cde', 'CDE02G0942' => 'cde', 'CDE02G1153' => 'cde', 'CDE02G4177' => 'cde', 'CDE04G2117' => 'cde', 'CDE04G2736' => 'cde', 'CDE08G1161' => 'cde', 'CDE09G1238' => 'cde', 'Cfa000467' => 'cfa', 'Cfa000947' => 'cfa', 'Cfa004969' => 'cfa', 'Cfa005284' => 'cfa', 'Cfa008993' => 'cfa', 'Cfa018187' => 'cfa', 'Cfa018454' => 'cfa', 'Cfa020585' => 'cfa', 'Ciclev10000424m.g' => 'ccl', 'Ciclev10003605m.g' => 'ccl', 'Ciclev10007828m.g' => 'ccl', 'Ciclev10014620m.g' => 'ccl', 'Ciclev10015169m.g' => 'ccl', 'Ciclev10018291m.g' => 'ccl', 'Ciclev10028256m.g' => 'ccl', 'Ciclev10033822m.g' => 'ccl', 'CiPaw.05G060300' => 'cil', 'CiPaw.05G085000' => 'cil', 'CiPaw.06G083700' => 'cil', 'CiPaw.06G120300' => 'cil', 'CiPaw.09G060500' => 'cil', 'CiPaw.09G123800' => 'cil', 'CiPaw.11G169700' => 'cil', 'CiPaw.12G118300' => 'cil', 'CiPaw.15G071000' => 'cil', 'CiPaw.15G081900' => 'cil', 'ClCG01G024610' => 'cla', 'ClCG03G006070' => 'cla', 'ClCG05G019250' => 'cla', 'ClCG09G009500' => 'cla', 'ClCG11G008200' => 'cla', 'ClCG11G018080' => 'cla', 'COL.COLO4_17373' => 'col', 'COL.COLO4_22994' => 'col', 'COL.COLO4_26389' => 'col', 'COL.COLO4_27170' => 'col', 'COL.COLO4_31074' => 'col', 'COL.COLO4_31465' => 'col', 'COL.COLO4_36438' => 'col', 'COL.COLO4_36439' => 'col', 'Cpa.g.c38781' => 'cpa', 'Cpa.g.sc128.12' => 'cpa', 'Cpa.g.sc166.7' => 'cpa', 'Cpa.g.sc166.8' => 'cpa', 'Cpa.g.sc20.111' => 'cpa', 'Cpa.g.sc27.31' => 'cpa', 'Cpa.g.sc64.36' => 'cpa', 'Cpa.g.sc64.37' => 'cpa', 'Cpa.g.sc66.49' => 'cpa', 'Cpa.g.sc80.64' => 'cpa', 'CsaV3_1G012320' => 'csa', 'CsaV3_2G008480' => 'csa', 'CsaV3_2G033450' => 'csa', 'CsaV3_3G044830' => 'csa', 'CsaV3_4G033710' => 'csa', 'CsaV3_6G051730' => 'csa', 'CsaV3_7G025350' => 'csa', 'CSS0001067' => 'camsi', 'CSS0005996' => 'camsi', 'CSS0006590' => 'camsi', 'CSS0009673' => 'camsi', 'CSS0010201' => 'camsi', 'CSS0010549' => 'camsi', 'CSS0011364' => 'camsi', 'CSS0014473' => 'camsi', 'CSS0014961' => 'camsi', 'CSS0020191' => 'camsi', 'CSS0021165' => 'camsi', 'CSS0022306' => 'camsi', 'CSS0030591' => 'camsi', 'CSS0030696' => 'camsi', 'CSS0032653' => 'camsi', 'CSS0037487' => 'camsi', 'CSS0041102' => 'camsi', 'CSS0041261' => 'camsi', 'CSS0046246' => 'camsi', 'CSS0049256' => 'camsi', 'DCAR_004075' => 'dca', 'DCAR_011538' => 'dca', 'DCAR_019553' => 'dca', 'DCAR_020952' => 'dca', 'DCAR_021739' => 'dca', 'DCAR_027407' => 'dca', 'DCAR_027913' => 'dca', 'DCAR_028066' => 'dca', 'Dinv05899' => 'din', 'Dinv07563' => 'din', 'Dinv08010' => 'din', 'Dinv14125' => 'din', 'Dinv20172' => 'din', 'Dinv30743' => 'din', 'Dinv31229' => 'din', 'Dinv34162' => 'din', 'Dinv36028' => 'din', 'Dinv39368' => 'din', 'Dinv40565' => 'din', 'Dinv41706' => 'din', 'Duzib052G0089' => 'dzi', 'Duzib116G0641' => 'dzi', 'Duzib132G0069' => 'dzi', 'Duzib132G1219' => 'dzi', 'Duzib147G0278' => 'dzi', 'Duzib160G0480' => 'dzi', 'Duzib170G0661' => 'dzi', 'Duzib177G0591' => 'dzi', 'Duzib187G1353' => 'dzi', 'Duzib192G0858' => 'dzi', 'Duzib192G0883' => 'dzi', 'Duzib213G0506' => 'dzi', 'Duzib235G0289' => 'dzi', 'Duzib251G0422' => 'dzi', 'ECA232G3898' => 'eca', 'ECA233G5950' => 'eca', 'ECA234G1699' => 'eca', 'ECA234G2421' => 'eca', 'ECA236G0426' => 'eca', 'ECA236G4331' => 'eca', 'ECA248G2573' => 'eca', 'EL10Ac1g00077' => 'bvu', 'EL10Ac1g01746' => 'bvu', 'EL10Ac2g03464' => 'bvu', 'EL10Ac4g08176' => 'bvu', 'EL10Ac7g17521' => 'bvu', 'EL10Ac8g20386' => 'bvu', 'EL10Ac9g21343' => 'bvu', 'EL10Ac9g22688' => 'bvu', 'Eucgr.B03434' => 'egr', 'Eucgr.D00618' => 'egr', 'Eucgr.E02395' => 'egr', 'Eucgr.F01129' => 'egr', 'Eucgr.F02622' => 'egr', 'Eucgr.F04207' => 'egr', 'FAN01G0570' => 'fan', 'FAN03G3351' => 'fan', 'FAN06G3702' => 'fan', 'FAN07G2149' => 'fan', 'FAN10G3758' => 'fan', 'FAN11G1170' => 'fan', 'FAN11G2050' => 'fan', 'FAN11G2724' => 'fan', 'FAN12G1700' => 'fan', 'FAN12G2028' => 'fan', 'FAN15G1160' => 'fan', 'FAN15G3063' => 'fan', 'FAN16G2540' => 'fan', 'FAN16G3077' => 'fan', 'FAN16G3624' => 'fan', 'FAN17G0221' => 'fan', 'FAN20G2492' => 'fan', 'FAN20G2905' => 'fan', 'FAN21G0548' => 'fan', 'FAN21G1300' => 'fan', 'FAN22G0077' => 'fan', 'FAN22G1315' => 'fan', 'FAN24G1280' => 'fan', 'FAN24G1445' => 'fan', 'FAN24G3527' => 'fan', 'FAN25G0464' => 'fan', 'FAN25G2885' => 'fan', 'FAN25G3270' => 'fan', 'FAN27G1101' => 'fan', 'FAN27G2846' => 'fan', 'FAN27G3524' => 'fan', 'FvH4_2g11770' => 'fve', 'FvH4_2g15630' => 'fve', 'FvH4_3g05570' => 'fve', 'FvH4_3g09110' => 'fve', 'FvH4_3g19940' => 'fve', 'FvH4_4g04821' => 'fve', 'FvH4_4g31480' => 'fve', 'FvH4_7g01740' => 'fve', 'Glyma.05G130400' => 'gma', 'Glyma.05G156400' => 'gma', 'Glyma.07G197000' => 'gma', 'Glyma.08G085151' => 'gma', 'Glyma.08G114500' => 'gma', 'Glyma.08G300400' => 'gma', 'Glyma.10G215800' => 'gma', 'Glyma.12G224400' => 'gma', 'Glyma.13G179300' => 'gma', 'Glyma.13G218151' => 'gma', 'Glyma.13G238800' => 'gma', 'Glyma.13G276900' => 'gma', 'Glyma.14G078200' => 'gma', 'Glyma.15G074500' => 'gma', 'Glyma.15G094100' => 'gma', 'Glyma.17G247200' => 'gma', 'Glyma.18G120100' => 'gma', 'Glyma.20G176000' => 'gma', 'Gohir.A01G063600' => 'ghi', 'Gohir.A01G170301' => 'ghi', 'Gohir.A02G060500' => 'ghi', 'Gohir.A05G133850' => 'ghi', 'Gohir.A05G161400' => 'ghi', 'Gohir.A06G012900' => 'ghi', 'Gohir.A06G035901' => 'ghi', 'Gohir.A06G127100' => 'ghi', 'Gohir.A06G210500' => 'ghi', 'Gohir.A08G008650' => 'ghi', 'Gohir.A09G072700' => 'ghi', 'Gohir.A09G088301' => 'ghi', 'Gohir.A10G040600' => 'ghi', 'Gohir.A12G036300' => 'ghi', 'Gohir.A12G143350' => 'ghi', 'Gohir.A12G165500' => 'ghi', 'Gohir.A13G145700' => 'ghi', 'Gohir.D01G050000' => 'ghi', 'Gohir.D01G051366' => 'ghi', 'Gohir.D01G161350' => 'ghi', 'Gohir.D02G065900' => 'ghi', 'Gohir.D05G164200' => 'ghi', 'Gohir.D05G355500' => 'ghi', 'Gohir.D06G010400' => 'ghi', 'Gohir.D06G111250' => 'ghi', 'Gohir.D06G132000' => 'ghi', 'Gohir.D06G210500' => 'ghi', 'Gohir.D07G165675' => 'ghi', 'Gohir.D08G062240' => 'ghi', 'Gohir.D08G086101' => 'ghi', 'Gohir.D08G138060' => 'ghi', 'Gohir.D09G072300' => 'ghi', 'Gohir.D10G041400' => 'ghi', 'Gohir.D11G191020' => 'ghi', 'Gohir.D11G212066' => 'ghi', 'Gohir.D12G036300' => 'ghi', 'Gohir.D12G168600' => 'ghi', 'Gohir.D13G150600' => 'ghi', 'Gorai.001G057300' => 'gra', 'Gorai.002G069900' => 'gra', 'Gorai.002G200000' => 'gra', 'Gorai.003G067600' => 'gra', 'Gorai.005G074800' => 'gra', 'Gorai.006G087300' => 'gra', 'Gorai.008G037500' => 'gra', 'Gorai.008G181400' => 'gra', 'Gorai.009G169400' => 'gra', 'Gorai.009G387900' => 'gra', 'Gorai.010G013300' => 'gra', 'Gorai.010G153800' => 'gra', 'Gorai.010G255800' => 'gra', 'Gorai.011G043700' => 'gra', 'Gorai.011G198900' => 'gra', 'Gorai.013G168400' => 'gra', 'GSVIVG01005212001' => 'vvi', 'GSVIVG01006163001' => 'vvi', 'GSVIVG01009625001' => 'vvi', 'GSVIVG01014338001' => 'vvi', 'GSVIVG01020005001' => 'vvi', 'GSVIVG01021450001' => 'vvi', 'GSVIVG01023975001' => 'vvi', 'GSVIVG01034490001' => 'vvi', 'HanXRQChr04g0112071' => 'han', 'HanXRQChr05g0131151' => 'han', 'HanXRQChr09g0262371' => 'han', 'HanXRQChr09g0268401' => 'han', 'HanXRQChr10g0279241' => 'han', 'HanXRQChr10g0297961' => 'han', 'HanXRQChr11g0326231' => 'han', 'HanXRQChr11g0328471' => 'han', 'HanXRQChr16g0507941' => 'han', 'HanXRQChr17g0560211' => 'han', 'Haze_02108' => 'cav', 'Haze_02428' => 'cav', 'Haze_05593' => 'cav', 'Haze_06448' => 'cav', 'Haze_09427' => 'cav', 'Haze_12022' => 'cav', 'Haze_17612' => 'cav', 'Haze_17928' => 'cav', 'Hma1.2p1_0032F.1_g019250' => 'hma', 'Hma1.2p1_0163F.1_g072690' => 'hma', 'Hma1.2p1_0265F.1_g106710' => 'hma', 'Hma1.2p1_0286F.1_g113970' => 'hma', 'Hma1.2p1_0363F.1_g136640' => 'hma', 'Hma1.2p1_0584F.1_g183470' => 'hma', 'Hma1.2p1_0885F.1_g232570' => 'hma', 'HPP92_006022' => 'vpl', 'HPP92_007320' => 'vpl', 'HPP92_011521' => 'vpl', 'HPP92_019387' => 'vpl', 'HPP92_024038' => 'vpl', 'Hund05891' => 'sun', 'Hund06450' => 'sun', 'Hund12053' => 'sun', 'Hund16800' => 'sun', 'Hund21222' => 'sun', 'Hund22896' => 'sun', 'Hund23746' => 'sun', 'Hund27083' => 'sun', 'Lalb_Chr02g0141831' => 'lal', 'Lalb_Chr02g0141841' => 'lal', 'Lalb_Chr05g0220411' => 'lal', 'Lalb_Chr06g0162081' => 'lal', 'Lalb_Chr09g0327651' => 'lal', 'Lalb_Chr13g0295051' => 'lal', 'Lalb_Chr15g0086801' => 'lal', 'Lalb_Chr16g0383781' => 'lal', 'Lalb_Chr16g0383791' => 'lal', 'Lalb_Chr18g0055441' => 'lal', 'Lalb_Chr18g0059611' => 'lal', 'Lalb_Chr20g0109661' => 'lal', 'Lalb_Chr20g0109831' => 'lal', 'Lalb_Chr20g0121871' => 'lal', 'Lalb_Chr22g0355361' => 'lal', 'Lalb_Chr25g0286371' => 'lal', 'Lj1A1187G43' => 'lonja', 'Lj1A1205T50' => 'lonja', 'Lj1A800G33' => 'lonja', 'Lj1C1187T7' => 'lonja', 'Lj1C843T11' => 'lonja', 'Lj1g0010940' => 'lja', 'Lj2A288T69' => 'lonja', 'Lj3g0024276' => 'lja', 'Lj4A47T76' => 'lonja', 'Lj4g0005805' => 'lja', 'Lj4g0006097' => 'lja', 'Lj4g0008528' => 'lja', 'Lj4g0024907' => 'lja', 'Lj5g0012472' => 'lja', 'Lj5g0018648' => 'lja', 'Lj6C789G1' => 'lonja', 'Lj6g0004000' => 'lja', 'Lj7A292G67' => 'lonja', 'Lj7A292T64' => 'lonja', 'Lj9A400T58' => 'lonja', 'Lsat_1_v5_gn_1_126181' => 'lsa', 'Lsat_1_v5_gn_4_123041' => 'lsa', 'Lsat_1_v5_gn_4_133620' => 'lsa', 'Lsat_1_v5_gn_4_53221' => 'lsa', 'Lsat_1_v5_gn_4_71961' => 'lsa', 'Lsat_1_v5_gn_7_105241' => 'lsa', 'Lsat_1_v5_gn_7_21361' => 'lsa', 'Lsat_1_v5_gn_7_28860' => 'lsa', 'Lsat_1_v5_gn_7_31260' => 'lsa', 'Lsat_1_v5_gn_8_52801' => 'lsa', 'Manes.02G191400' => 'mes', 'Manes.03G110100' => 'mes', 'Manes.04G071100' => 'mes', 'Manes.05G100500' => 'mes', 'Manes.05G164700' => 'mes', 'Manes.15G087000' => 'mes', 'Manes.15G121500' => 'mes', 'Manes.16G028300' => 'mes', 'Manes.17G046100' => 'mes', 'Manes.17G069800' => 'mes', 'Manes.18G100500' => 'mes', 'Mapoly0002s0109' => 'mpo', 'Mapoly0024s0007' => 'mpo', 'Mapoly0089s0032' => 'mpo', 'MBI04_g42241_MAGBIO' => 'mbi', 'MBI05_g11988_MAGBIO' => 'mbi', 'MBI05_g35452_MAGBIO' => 'mbi', 'MBI07_g30179_MAGBIO' => 'mbi', 'MBI07_g35859_MAGBIO' => 'mbi', 'MBI07_g35860_MAGBIO' => 'mbi', 'MBI07_g37166_MAGBIO' => 'mbi', 'MBI08_g18172_MAGBIO' => 'mbi', 'MBI09_g08441_MAGBIO' => 'mbi', 'MBI13_g01676_MAGBIO' => 'mbi', 'MBI14_g42955_MAGBIO' => 'mbi', 'MBI16_g13161_MAGBIO' => 'mbi', 'MBI17_g27204_MAGBIO' => 'mbi', 'MBI19_g21595_MAGBIO' => 'mbi', 'MD00G1148400' => 'mdo', 'MD02G1301200' => 'mdo', 'MD03G1227800' => 'mdo', 'MD05G1041100' => 'mdo', 'MD05G1124800' => 'mdo', 'MD05G1284000' => 'mdo', 'MD05G1338800' => 'mdo', 'MD05G1338900' => 'mdo', 'MD07G1022800' => 'mdo', 'MD10G1047500' => 'mdo', 'MD10G1127500' => 'mdo', 'MD10G1262300' => 'mdo', 'MD10G1293800' => 'mdo', 'MD16G1074300' => 'mdo', 'Medtr1g021670' => 'mtr', 'Medtr1g096320' => 'mtr', 'Medtr2g013690' => 'mtr', 'Medtr2g019450' => 'mtr', 'Medtr2g085170' => 'mtr', 'Medtr4g088785' => 'mtr', 'Medtr8g055930' => 'mtr', 'Medtr8g085850' => 'mtr', 'MELO3C002605.2' => 'cme', 'MELO3C003891.2' => 'cme', 'MELO3C004012.2' => 'cme', 'MELO3C007134.2' => 'cme', 'MELO3C008118.2' => 'cme', 'MELO3C016700.2' => 'cme', 'MELO3C024127.2' => 'cme', 'MELO3C033361.2' => 'cme', 'MELO3C033362.2' => 'cme', 'Migut.C00430' => 'egut', 'Migut.C01246' => 'egut', 'Migut.E00101' => 'egut', 'Migut.H01486' => 'egut', 'Migut.H01939' => 'egut', 'Migut.K00360' => 'egut', 'Migut.M00910' => 'egut', 'Migut.M01139' => 'egut', 'Migut.N02677' => 'egut', 'MSTRG.13252' => 'ama', 'MSTRG.14701' => 'ama', 'MSTRG.1521' => 'ama', 'MSTRG.15884' => 'ama', 'MSTRG.16242' => 'ama', 'MSTRG.22285' => 'ama', 'MSTRG.22444' => 'ama', 'MSTRG.2349' => 'ama', 'MSTRG.26308' => 'ama', 'MSTRG.28296' => 'ama', 'MSTRG.9895' => 'ama', 'Nitab4.5_0000110g0060' => 'nta', 'Nitab4.5_0000420g0130' => 'nta', 'Nitab4.5_0000422g0030' => 'nta', 'Nitab4.5_0000560g0180' => 'nta', 'Nitab4.5_0000703g0100' => 'nta', 'Nitab4.5_0000786g0200' => 'nta', 'Nitab4.5_0001336g0020' => 'nta', 'Nitab4.5_0001796g0030' => 'nta', 'Nitab4.5_0003348g0060' => 'nta', 'Nitab4.5_0003698g0040' => 'nta', 'Nitab4.5_0003942g0090' => 'nta', 'Nitab4.5_0004775g0070' => 'nta', 'Nitab4.5_0004864g0030' => 'nta', 'Nitab4.5_0005615g0020' => 'nta', 'Nitab4.5_0009288g0030' => 'nta', 'Nitab4.5_0009341g0010' => 'nta', 'Nitab4.5_0009535g0010' => 'nta', 'Nn1g03995' => 'nnu', 'Nn1g04100' => 'nnu', 'Nn1g06530' => 'nnu', 'Nn3g16404' => 'nnu', 'Nn3g17212' => 'nnu', 'Nn3g20776' => 'nnu', 'Nn3g21923' => 'nnu', 'Nn5g27737' => 'nnu', 'Nn5g29461' => 'nnu', 'Nn7g38355' => 'nnu', 'Nn8g39873' => 'nnu', 'Oeu000548.2' => 'oeu', 'Oeu004672.1' => 'oeu', 'Oeu015605.2' => 'oeu', 'Oeu016092.1' => 'oeu', 'Oeu017879.3' => 'oeu', 'Oeu024910.1' => 'oeu', 'Oeu028965.1' => 'oeu', 'Oeu031269.1' => 'oeu', 'Oeu031270.1' => 'oeu', 'Oeu032535.1' => 'oeu', 'Oeu034151.1' => 'oeu', 'Oeu034152.1' => 'oeu', 'Oeu034588.2' => 'oeu', 'Oeu050846.1' => 'oeu', 'Oeu050849.2' => 'oeu', 'Oeu051063.2' => 'oeu', 'Oeu052368.1' => 'oeu', 'Oeu052370.1' => 'oeu', 'Os01g0210400' => 'osa', 'Os01g0304300' => 'osa', 'Os01g0749100' => 'osa', 'Os02g0745800' => 'osa', 'Os03g0769050' => 'osa', 'Os05g0531500' => 'osa', 'Os06g0724300' => 'osa', 'Os11g0198100' => 'osa', 'Peaxi162Scf00069g01425' => 'pax', 'Peaxi162Scf00280g00811' => 'pax', 'Peaxi162Scf00310g00615' => 'pax', 'Peaxi162Scf00362g00542' => 'pax', 'Peaxi162Scf00461g00310' => 'pax', 'Peaxi162Scf00530g00118' => 'pax', 'Peaxi162Scf00541g00057' => 'pax', 'Peaxi162Scf00661g00017' => 'pax', 'Peaxi162Scf00926g00027' => 'pax', 'Peaxi162Scf01064g00263' => 'pax', 'Peaxi162Scf01211g00135' => 'pax', 'PGR004G2336' => 'pgr', 'PGR042G0327' => 'pgr', 'PGR042G1957' => 'pgr', 'PGR042G2003' => 'pgr', 'PGR042G3929' => 'pgr', 'PGR083G1137' => 'pgr', 'PGR083G1364' => 'pgr', 'PGSC0003DMG400003381' => 'stu', 'PGSC0003DMG400003417' => 'stu', 'PGSC0003DMG400008981' => 'stu', 'PGSC0003DMG400012417' => 'stu', 'PGSC0003DMG400012823' => 'stu', 'PGSC0003DMG400016885' => 'stu', 'PGSC0003DMG400022812' => 'stu', 'PGSC0003DMG400029726' => 'stu', 'PGSC0003DMG401009243' => 'stu', 'PGSC0003DMG401031505' => 'stu', 'PGSC0003DMG402031505' => 'stu', 'Phvul.001G017600' => 'pvu', 'Phvul.002G193500' => 'pvu', 'Phvul.002G228900' => 'pvu', 'Phvul.002G236800' => 'pvu', 'Phvul.003G049500' => 'pvu', 'Phvul.005G072000' => 'pvu', 'Phvul.006G164800' => 'pvu', 'Phvul.006G185100' => 'pvu', 'Phvul.007G090000' => 'pvu', 'Potri.001G399800' => 'ptr', 'Potri.002G149900' => 'ptr', 'Potri.004G044100' => 'ptr', 'Potri.004G177600' => 'ptr', 'Potri.009G138000' => 'ptr', 'Potri.010G094000' => 'ptr', 'Potri.011G053000' => 'ptr', 'Potri.011G119300' => 'ptr', 'Potri.013G113700' => 'ptr', 'Potri.018G107800' => 'ptr', 'Potri.019G084100' => 'ptr', 'Pp3c14_23720' => 'ppa', 'Pp3c16_6340' => 'ppa', 'Pp3c23_13420' => 'ppa', 'Pp3c24_2740' => 'ppa', 'Pp3c25_860' => 'ppa', 'Pp3c8_21750' => 'ppa', 'Prupe.1G273000' => 'ppe', 'Prupe.1G273700' => 'ppe', 'Prupe.1G274100' => 'ppe', 'Prupe.2G023300' => 'ppe', 'Prupe.4G048000' => 'ppe', 'Prupe.4G080400' => 'ppe', 'Prupe.4G181200' => 'ppe', 'Prupe.8G056900' => 'ppe', 'Prupe.8G168700' => 'ppe', 'Psat1g189080' => 'psa', 'Psat1g204760' => 'psa', 'Psat4g175560' => 'psa', 'Psat4g177720' => 'psa', 'Psat5g244240' => 'psa', 'Psat6g010720' => 'psa', 'Psat6g187200' => 'psa', 'Psat7g072040' => 'psa', 'PSO017G3501' => 'pso', 'PSO063G2148' => 'pso', 'PSO063G5608' => 'pso', 'PSO210G6392' => 'pso', 'PSO541G2319' => 'pso', 'PSO541G2836' => 'pso', 'PSO541G4012' => 'pso', 'PSO541G6253' => 'pso', 'PSO675G0580' => 'pso', 'PSO675G0856' => 'pso', 'PSO675G5635' => 'pso', 'PSO675G9157' => 'pso', 'PSO832G1660' => 'pso', 'PSO832G1969' => 'pso', 'QL02p007186' => 'qlo', 'QL02p033904' => 'qlo', 'QL03p064391' => 'qlo', 'QL05p040593' => 'qlo', 'QL05p058242' => 'qlo', 'QL08p021825' => 'qlo', 'QL11p004981' => 'qlo', 'RcHm_v2.0_Chr1g0318301' => 'rch', 'RcHm_v2.0_Chr4g0418501' => 'rch', 'RcHm_v2.0_Chr4g0439971' => 'rch', 'RcHm_v2.0_Chr5g0008541' => 'rch', 'RcHm_v2.0_Chr5g0014101' => 'rch', 'RcHm_v2.0_Chr5g0014131' => 'rch', 'RcHm_v2.0_Chr5g0033621' => 'rch', 'RcHm_v2.0_Chr6g0272041' => 'rch', 'RcHm_v2.0_Chr6g0278831' => 'rch', 'Rhsim02G0130400' => 'rsi', 'Rhsim02G0171100' => 'rsi', 'Rhsim05G0053000' => 'rsi', 'Rhsim05G0053100' => 'rsi', 'Rhsim06G0096500' => 'rsi', 'Rhsim06G0096600' => 'rsi', 'Rhsim06G0199100' => 'rsi', 'Rhsim12G0062300' => 'rsi', 'Rhsim12G0062800' => 'rsi', 'Sabra02G0118600' => 'sbr', 'Sabra04G0027300' => 'sbr', 'Sabra04G0119500' => 'sbr', 'Sabra08G0112500' => 'sbr', 'Sabra11G0036800' => 'sbr', 'Sabra11G0103800' => 'sbr', 'Sabra13G0096300' => 'sbr', 'Sabra16G0262300' => 'sbr', 'Sabra18G0091700' => 'sbr', 'Sabra19G0095400' => 'sbr', 'SalBow6G3080' => 'sbo', 'SalBow7G1157' => 'sbo', 'SalBow7G2123' => 'sbo', 'SalBow7G2285' => 'sbo', 'SalBow7G3537' => 'sbo', 'SalBow8G2947' => 'sbo', 'SalBow8G4463' => 'sbo', 'SalBow8G5466' => 'sbo', 'Sc01g0001750' => 'sci', 'Sc02g0006640' => 'sci', 'Sc02g0006670' => 'sci', 'Sc04g0008220' => 'sci', 'Sc05g0006190' => 'sci', 'Sc08g0002760' => 'sci', 'Sc17g0006170' => 'sci', 'Sc22g0002050' => 'sci', 'Sc23g0001190' => 'sci', 'Sc24g0000980' => 'sci', 'Sed0006245' => 'sed', 'Sed0007543' => 'sed', 'Sed0009411' => 'sed', 'Sed0010765' => 'sed', 'Sed0012944' => 'sed', 'Sed0014682' => 'sed', 'Sed0016174' => 'sed', 'Sed0016796' => 'sed', 'Sed0020317' => 'sed', 'Sed0021467' => 'sed', 'SEGI_01316' => 'sgi', 'SEGI_03374' => 'sgi', 'SEGI_16265' => 'sgi', 'SEGI_18569' => 'sgi', 'SEGI_20351' => 'sgi', 'SEGI_26395' => 'sgi', 'SEGI_29469' => 'sgi', 'SEGI_34771' => 'sgi', 'SEGI_36769' => 'sgi', 'SEGI_37139' => 'sgi', 'SGA_v2.0_scaffold100G29687' => 'sas', 'SGA_v2.0_scaffold118G32472' => 'sas', 'SGA_v2.0_scaffold14G07051' => 'sas', 'SGA_v2.0_scaffold183G39845' => 'sas', 'SGA_v2.0_scaffold1G00174' => 'sas', 'SGA_v2.0_scaffold22G09714' => 'sas', 'SGA_v2.0_scaffold333G48992' => 'sas', 'SGA_v2.0_scaffold46G17491' => 'sas', 'SGA_v2.0_scaffold49G18294' => 'sas', 'SGA_v2.0_scaffold63G21658' => 'sas', 'SHI01741' => 'shi', 'SHI05771' => 'shi', 'SHI18077' => 'shi', 'SHI20525' => 'shi', 'SHI20527' => 'shi', 'SHI20528' => 'shi', 'SMO172G0185' => 'smo', 'SMO198G0020' => 'smo', 'SMO351G0006' => 'smo', 'SMO356G0118' => 'smo', 'SMO358G0296' => 'smo', 'SMO367G0079' => 'smo', 'SMO367G1277' => 'smo', 'Solyc01g014220.3' => 'sly', 'Solyc01g111770.2' => 'sly', 'Solyc02g078180.3' => 'sly', 'Solyc03g006430.3' => 'sly', 'Solyc03g006456.1' => 'sly', 'Solyc03g079860.2' => 'sly', 'Solyc04g079770.3' => 'sly', 'Solyc05g007430.4' => 'sly', 'Solyc07g063150.3' => 'sly', 'Solyc08g016620.3' => 'sly', 'Solyc09g057590.3' => 'sly', 'Solyc09g057600.1' => 'sly', 'Solyc10g009050.3' => 'sly', 'Solyc11g017420.2' => 'sly', 'Sopen01g053810' => 'spe', 'Sopen02g023040' => 'spe', 'Sopen03g002440' => 'spe', 'Sopen04g033350' => 'spe', 'Sopen05g003310' => 'spe', 'Sopen07g004050' => 'spe', 'Sopen07g031340' => 'spe', 'Sopen08g006990' => 'spe', 'Sopen10g004830' => 'spe', 'Sopen11g009370' => 'spe', 'Sp1g24450' => 'spa', 'Sp1g29670' => 'spa', 'Sp1g39600' => 'spa', 'Sp2g11080' => 'spa', 'Sp2g13970' => 'spa', 'Sp4g16130' => 'spa', 'Sp6g13080' => 'spa', 'Sp7g37270' => 'spa', 'TAR371G0065' => 'tar', 'TAR376G0340' => 'tar', 'TAR376G0435' => 'tar', 'TAR381G0002' => 'tar', 'TAR381G1236' => 'tar', 'TAR624G0055' => 'tar', 'TAR624G0324' => 'tar', 'TAR624G0696' => 'tar', 'TAR624G0906' => 'tar', 'TAR625G0107' => 'tar', 'TAR626G0015' => 'tar', 'TAR626G1356' => 'tar', 'TAR627G0888' => 'tar', 'TAR628G0399' => 'tar', 'TAR628G1327' => 'tar', 'TAR629G2831' => 'tar', 'TAR629G2874' => 'tar', 'TAR633G1432' => 'tar', 'TAR633G2771' => 'tar', 'THA.LOC104803394' => 'tha', 'THA.LOC104805153' => 'tha', 'THA.LOC104806784' => 'tha', 'THA.LOC104810473' => 'tha', 'THA.LOC104813100' => 'tha', 'THA.LOC104814215' => 'tha', 'THA.LOC104815554' => 'tha', 'THA.LOC104820544' => 'tha', 'THA.LOC104824754' => 'tha', 'THA.LOC104827717' => 'tha', 'Thecc.02G031400' => 'tca', 'Thecc.02G055900' => 'tca', 'Thecc.02G350800' => 'tca', 'Thecc.06G150900' => 'tca', 'Thecc.06G186600' => 'tca', 'Thecc.07G089600' => 'tca', 'Thecc.08G020400' => 'tca', 'Thecc.08G182100' => 'tca', 'Thhalv10000873m.g' => 'esa', 'Thhalv10004185m.g' => 'esa', 'Thhalv10006981m.g' => 'esa', 'Thhalv10007204m.g' => 'esa', 'Thhalv10011374m.g' => 'esa', 'Thhalv10013482m.g' => 'esa', 'Thhalv10017801m.g' => 'esa', 'Thhalv10024983m.g' => 'esa', 'TPR.G12072' => 'tpr', 'TPR.G15769' => 'tpr', 'TPR.G16504' => 'tpr', 'TPR.G16506' => 'tpr', 'TPR.G24345' => 'tpr', 'TPR.G26666' => 'tpr', 'TPR.G27320' => 'tpr', 'TPR.G31819' => 'tpr', 'TPR.G38879' => 'tpr', 'TPR.G39015' => 'tpr', 'TPR.G8819' => 'tpr', 'TWI09G0924' => 'twi', 'TWI12G0811' => 'twi', 'TWI12G1294' => 'twi', 'TWI31G0150' => 'twi', 'TWI36G1262' => 'twi', 'TWI38G1287' => 'twi', 'TWI38G1633' => 'twi', 'TWI38G1982' => 'twi', 'TWI39G0116' => 'twi', 'TWI60G1011' => 'twi', 'TWI63G0171' => 'twi', 'TWI73G0839' => 'twi', 'TWI79G1511' => 'twi', 'unitig_0.g915' => 'ugi', 'unitig_0.g916' => 'ugi', 'unitig_21.g20219' => 'ugi', 'unitig_21.g20416' => 'ugi', 'unitig_578.g16132' => 'ugi', 'unitig_578.g16718' => 'ugi', 'unitig_62.g23481' => 'ugi', 'unitig_744.g24535' => 'ugi', 'unitig_749.g13525' => 'ugi', 'vmacro01248' => 'vma', 'vmacro02290' => 'vma', 'vmacro10946' => 'vma', 'vmacro11865' => 'vma', 'vmacro12493' => 'vma', 'vmacro17322' => 'vma', 'vmacro21599' => 'vma', 'vmacro23041' => 'vma', 'VMungo0251G0004' => 'vmu', 'VMungo0251G2639' => 'vmu', 'VMungo0251G2967' => 'vmu', 'VMungo0540G0864' => 'vmu', 'VMungo0540G1569' => 'vmu', 'VMungo0647G0317' => 'vmu', 'VMungo0720G1373' => 'vmu', 'VMungo0720G1508' => 'vmu', 'VMungo1080G0485' => 'vmu', 'VMungo1215G3177' => 'vmu', 'Zm00001eb112600' => 'zma', 'Zm00001eb120220' => 'zma', 'Zm00001eb153240' => 'zma', 'Zm00001eb168880' => 'zma', 'Zm00001eb213920' => 'zma', 'Zm00001eb228280' => 'zma', 'Zm00001eb254580' => 'zma', 'Zm00001eb272180' => 'zma', 'Zm00001eb293190' => 'zma', 'Zm00001eb322930' => 'zma', 'Zm00001eb353360' => 'zma', 'Zm00001eb353390' => 'zma', 'Zm00001eb353430' => 'zma', 'Zm00001eb353440' => 'zma', 'Zm00001eb353780' => 'zma' ) $gf_id = 'HOM05D000499' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000499' ) $data_identifier = 'HOM05D000499' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 29, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 12, 'amhyb' => (int) 8, 'aly' => (int) 12, 'aox' => (int) 9, 'arhy' => (int) 26, 'ath' => (int) 8, 'atr' => (int) 7, 'acertr' => (int) 10, 'cqu' => (int) 15, 'bca' => (int) 29, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 11, 'cansat' => (int) 8, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 9, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 8, 'cpa' => (int) 10, 'csa' => (int) 7, 'camsi' => (int) 20, 'dca' => (int) 8, 'din' => (int) 12, 'dzi' => (int) 14, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 6, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 38, 'gra' => (int) 16, 'vvi' => (int) 8, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 5, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 11, 'lja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 11, 'mpo' => (int) 3, 'mbi' => (int) 14, 'mdo' => (int) 14, 'mtr' => (int) 8, 'cme' => (int) 9, 'egut' => (int) 9, 'ama' => (int) 11, 'nta' => (int) 17, 'nnu' => (int) 11, 'oeu' => (int) 18, 'osa' => (int) 8, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 6, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 9, 'rsi' => (int) 9, 'sbr' => (int) 10, 'sbo' => (int) 8, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 10, 'sas' => (int) 10, 'shi' => (int) 6, 'smo' => (int) 7, 'sly' => (int) 14, 'spe' => (int) 10, 'spa' => (int) 8, 'tar' => (int) 19, 'tha' => (int) 10, 'tca' => (int) 8, 'esa' => (int) 8, 'tpr' => (int) 11, 'twi' => (int) 13, 'ugi' => (int) 9, 'vma' => (int) 8, 'vmu' => (int) 10, 'zma' => (int) 15 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb353780' $species_info = array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ) $local_species = 'osa' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000499', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1066', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p29780' => 'bna', 'A02p33180' => 'bna', 'A03p16470' => 'bna', 'A03p66010' => 'bna', 'A04p25970' => 'bna', 'A06p01270' => 'bna', 'A06p46080' => 'bna', 'A07p11400' => 'bna', 'A08p01840' => 'bna', 'A08p08230' => 'bna', 'A08p25740' => 'bna', 'A09p32070' => 'bna', 'A09p37830' => 'bna', 'A09p42840' => 'bna', 'A09p42850' => 'bna', 'Aa31LG10G2060' => 'aar', 'Aa31LG2G7410' => 'aar', 'Aa31LG6G10200' => 'aar', 'Aa31LG6G16680' => 'aar', 'Aa31LG6G8470' => 'aar', 'Aa31LG9G12730' => 'aar', 'Aa31LG9G13680' => 'aar', 'Aa31LG9G14920' => 'aar', 'Aa31LG9G6650' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4977' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5467' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3254' => 'aag', 'Actinidia02578' => 'ach', 'Actinidia07693' => 'ach', 'Actinidia08413' => 'ach', 'Actinidia08414' => 'ach', 'Actinidia15289' => 'ach', 'Actinidia19871' => 'ach', 'Actinidia21475' => 'ach', 'Actinidia22576' => 'ach', 'Actinidia28327' => 'ach', 'Actinidia32491' => 'ach', 'Actinidia39463' => 'ach', 'Actinidia39571' => 'ach', 'Ah.01g013750' => 'amhyb', 'Ah.01g023210' => 'amhyb', 'Ah.04g164850' => 'amhyb', 'Ah.05g178060' => 'amhyb', 'Ah.07g204270' => 'amhyb', 'Ah.07g208480' => 'amhyb', 'Ah.09g237410' => 'amhyb', 'Ah.14g089460' => 'amhyb', 'AL1G41790' => 'aly', 'AL1G49050' => 'aly', 'AL1G53810' => 'aly', 'AL1G61400' => 'aly', 'AL4G18580' => 'aly', 'AL5G12510' => 'aly', 'AL5G12540' => 'aly', 'AL6G43230' => 'aly', 'AL7G10370' => 'aly', 'AL7G19250' => 'aly', 'AL8G12240' => 'aly', 'AL8G18540' => 'aly', 'Aqoxy1G02409' => 'aox', 'Aqoxy2G03993' => 'aox', 'Aqoxy3G03357' => 'aox', 'Aqoxy4G00785' => 'aox', 'Aqoxy5G02598' => 'aox', 'Aqoxy6G00132' => 'aox', 'Aqoxy7G01776' => 'aox', 'Aqoxy7G02316' => 'aox', 'Aqoxy7G03973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.12AFKW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B8730' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27IQR1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3F75VG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3RE0GA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41TCQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.527VTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FIR39' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5W8UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DA38EV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ63HS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H1I32C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HC27T5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4M8AP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7N3CZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9UVDZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LS1NQA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT1D4B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SKC4TM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCFV76' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF9Q1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQWD9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1ZM88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WE07RT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YCK7VH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJE6Q6' => 'arhy', 'AT1G28240' => 'ath', 'AT1G34550' => 'ath', 'AT1G53040' => 'ath', 'AT2G02910' => 'ath', 'AT4G09630' => 'ath', 'AT4G38500' => 'ath', 'AT5G42660' => 'ath', 'AT5G46220' => 'ath', 'ATR0152G026' => 'atr', 'ATR0564G343' => 'atr', 'ATR0706G151' => 'atr', 'ATR0733G207' => 'atr', 'ATR0751G234' => 'atr', 'ATR0807G048' => 'atr', 'ATR1091G084' => 'atr', 'Atru.chr10.1229' => 'acertr', 'Atru.chr10.1230' => 'acertr', 'Atru.chr10.1874' => 'acertr', 'Atru.chr11.1808' => 'acertr', 'Atru.chr13.1795' => 'acertr', 'Atru.chr13.570' => 'acertr', 'Atru.chr2.2608' => 'acertr', 'Atru.chr2.2609' => 'acertr', 'Atru.chr5.3428' => 'acertr', 'Atru.chr8.1171' => 'acertr', 'AUR62004651' => 'cqu', 'AUR62008675' => 'cqu', 'AUR62010014' => 'cqu', 'AUR62013004' => 'cqu', 'AUR62014825' => 'cqu', 'AUR62015015' => 'cqu', 'AUR62015151' => 'cqu', 'AUR62017020' => 'cqu', 'AUR62019422' => 'cqu', 'AUR62023570' => 'cqu', 'AUR62025571' => 'cqu', 'AUR62029098' => 'cqu', 'AUR62033863' => 'cqu', 'AUR62034296' => 'cqu', 'AUR62040075' => 'cqu', 'BcaB02g07334' => 'bca', 'BcaB02g10575' => 'bca', 'BcaB03g12119' => 'bca', 'BcaB03g12120' => 'bca', 'BcaB03g13945' => 'bca', 'BcaB04g17123' => 'bca', 'BcaB04g17867' => 'bca', 'BcaB04g19839' => 'bca', 'BcaB07g30317' => 'bca', 'BcaB07g32432' => 'bca', 'BcaB07g33362' => 'bca', 'BcaB08g36611' => 'bca', 'BcaC01g00028' => 'bca', 'BcaC01g01356' => 'bca', 'BcaC01g02034' => 'bca', 'BcaC01g06051' => 'bca', 'BcaC03g16839' => 'bca', 'BcaC03g17176' => 'bca', 'BcaC05g26829' => 'bca', 'BcaC06g31490' => 'bca', 'BcaC06g35344' => 'bca', 'BcaC06g36570' => 'bca', 'BcaC07g37537' => 'bca', 'BcaC08g43491' => 'bca', 'BcaC08g43773' => 'bca', 'BcaNung00234' => 'bca', 'BcaNung01982' => 'bca', 'BcaNung03707' => 'bca', 'BcaNung06454' => 'bca', 'BolC2t10762H' => 'bol', 'BolC2t11191H' => 'bol', 'BolC3t14322H' => 'bol', 'BolC3t19747H' => 'bol', 'BolC3t21425H' => 'bol', 'BolC4t27800H' => 'bol', 'BolC5t31423H' => 'bol', 'BolC6t35951H' => 'bol', 'BolC6t36282H' => 'bol', 'BolC7t40678H' => 'bol', 'BolC7t40679H' => 'bol', 'BolC7t42222H' => 'bol', 'BolC7t43492H' => 'bol', 'BolC7t46785H' => 'bol', 'BolC8t47853H' => 'bol', 'BolC9t56805H' => 'bol', 'BraA02t08000Z' => 'bra', 'BraA02t08341Z' => 'bra', 'BraA03t10936Z' => 'bra', 'BraA03t15657Z' => 'bra', 'BraA04t18100Z' => 'bra', 'BraA05t20523Z' => 'bra', 'BraA06t23353Z' => 'bra', 'BraA06t27473Z' => 'bra', 'BraA06t27769Z' => 'bra', 'BraA07t28928Z' => 'bra', 'BraA08t32236Z' => 'bra', 'BraA08t32841Z' => 'bra', 'BraA08t34524Z' => 'bra', 'BraA09t38742Z' => 'bra', 'BraA09t39295Z' => 'bra', 'C02p47180' => 'bna', 'C02p50990' => 'bna', 'C03p19360' => 'bna', 'C03p74950' => 'bna', 'C03p91000' => 'bna', 'C04p63260' => 'bna', 'C05p27050' => 'bna', 'C06p08750' => 'bna', 'C06p11490' => 'bna', 'C07p02820' => 'bna', 'C07p17180' => 'bna', 'C07p29440' => 'bna', 'C07p63730' => 'bna', 'C09p39260' => 'bna', 'CAN.G1164.34' => 'can', 'CAN.G1164.39' => 'can', 'CAN.G1530.3' => 'can', 'CAN.G162.61' => 'can', 'CAN.G176.6' => 'can', 'CAN.G289.49' => 'can', 'CAN.G370.21' => 'can', 'CAN.G370.22' => 'can', 'CAN.G371.117' => 'can', 'CAN.G58.37' => 'can', 'CAN.G588.98' => 'can', 'CANSAT21G2266' => 'cansat', 'CANSAT25G2799' => 'cansat', 'CANSAT35G0862' => 'cansat', 'CANSAT35G1704' => 'cansat', 'CANSAT35G1760' => 'cansat', 'CANSAT56G3971' => 'cansat', 'CANSAT56G4116' => 'cansat', 'CANSAT80G1259' => 'cansat', 'CARHR027730' => 'chi', 'CARHR033880' => 'chi', 'CARHR043270' => 'chi', 'CARHR145330' => 'chi', 'CARHR145340' => 'chi', 'CARHR175570' => 'chi', 'CARHR181570' => 'chi', 'CARHR258470' => 'chi', 'CARHR260490' => 'chi', 'CARHR294220' => 'chi', 'Carub.0001s2668' => 'cru', 'Carub.0001s3257' => 'cru', 'Carub.0001s4220' => 'cru', 'Carub.0005s0179' => 'cru', 'Carub.0006s2807' => 'cru', 'Carub.0007s0039' => 'cru', 'Carub.0008s0169' => 'cru', 'Carub.0008s0636' => 'cru', 'Ca_00338_v3' => 'car', 'Ca_00542_v3' => 'car', 'Ca_01844_v3' => 'car', 'Ca_10611_v3' => 'car', 'Ca_13326_v3' => 'car', 'Ca_17944_v3' => 'car', 'Ca_18546_v3' => 'car', 'Ca_24219_v3' => 'car', 'Ca_29972_v3' => 'car', 'CBR_g3681' => 'cbr', 'CBR_g40021' => 'cbr', 'Cc01_g08140' => 'ccan', 'Cc02_g13410' => 'ccan', 'Cc02_g37480' => 'ccan', 'Cc05_g12030' => 'ccan', 'Cc09_g03370' => 'ccan', 'Cc09_g10300' => 'ccan', 'Cc10_g03530' => 'ccan', 'Cc10_g11380' => 'ccan', 'CDE01G0176' => 'cde', 'CDE02G0675' => 'cde', 'CDE02G0942' => 'cde', 'CDE02G1153' => 'cde', 'CDE02G4177' => 'cde', 'CDE04G2117' => 'cde', 'CDE04G2736' => 'cde', 'CDE08G1161' => 'cde', 'CDE09G1238' => 'cde', 'Cfa000467' => 'cfa', 'Cfa000947' => 'cfa', 'Cfa004969' => 'cfa', 'Cfa005284' => 'cfa', 'Cfa008993' => 'cfa', 'Cfa018187' => 'cfa', 'Cfa018454' => 'cfa', 'Cfa020585' => 'cfa', 'Ciclev10000424m.g' => 'ccl', 'Ciclev10003605m.g' => 'ccl', 'Ciclev10007828m.g' => 'ccl', 'Ciclev10014620m.g' => 'ccl', 'Ciclev10015169m.g' => 'ccl', 'Ciclev10018291m.g' => 'ccl', 'Ciclev10028256m.g' => 'ccl', 'Ciclev10033822m.g' => 'ccl', 'CiPaw.05G060300' => 'cil', 'CiPaw.05G085000' => 'cil', 'CiPaw.06G083700' => 'cil', 'CiPaw.06G120300' => 'cil', 'CiPaw.09G060500' => 'cil', 'CiPaw.09G123800' => 'cil', 'CiPaw.11G169700' => 'cil', 'CiPaw.12G118300' => 'cil', 'CiPaw.15G071000' => 'cil', 'CiPaw.15G081900' => 'cil', 'ClCG01G024610' => 'cla', 'ClCG03G006070' => 'cla', 'ClCG05G019250' => 'cla', 'ClCG09G009500' => 'cla', 'ClCG11G008200' => 'cla', 'ClCG11G018080' => 'cla', 'COL.COLO4_17373' => 'col', 'COL.COLO4_22994' => 'col', 'COL.COLO4_26389' => 'col', 'COL.COLO4_27170' => 'col', 'COL.COLO4_31074' => 'col', 'COL.COLO4_31465' => 'col', 'COL.COLO4_36438' => 'col', 'COL.COLO4_36439' => 'col', 'Cpa.g.c38781' => 'cpa', 'Cpa.g.sc128.12' => 'cpa', 'Cpa.g.sc166.7' => 'cpa', 'Cpa.g.sc166.8' => 'cpa', 'Cpa.g.sc20.111' => 'cpa', 'Cpa.g.sc27.31' => 'cpa', 'Cpa.g.sc64.36' => 'cpa', 'Cpa.g.sc64.37' => 'cpa', 'Cpa.g.sc66.49' => 'cpa', 'Cpa.g.sc80.64' => 'cpa', 'CsaV3_1G012320' => 'csa', 'CsaV3_2G008480' => 'csa', 'CsaV3_2G033450' => 'csa', 'CsaV3_3G044830' => 'csa', 'CsaV3_4G033710' => 'csa', 'CsaV3_6G051730' => 'csa', 'CsaV3_7G025350' => 'csa', 'CSS0001067' => 'camsi', 'CSS0005996' => 'camsi', 'CSS0006590' => 'camsi', 'CSS0009673' => 'camsi', 'CSS0010201' => 'camsi', 'CSS0010549' => 'camsi', 'CSS0011364' => 'camsi', 'CSS0014473' => 'camsi', 'CSS0014961' => 'camsi', 'CSS0020191' => 'camsi', 'CSS0021165' => 'camsi', 'CSS0022306' => 'camsi', 'CSS0030591' => 'camsi', 'CSS0030696' => 'camsi', 'CSS0032653' => 'camsi', 'CSS0037487' => 'camsi', 'CSS0041102' => 'camsi', 'CSS0041261' => 'camsi', 'CSS0046246' => 'camsi', 'CSS0049256' => 'camsi', 'DCAR_004075' => 'dca', 'DCAR_011538' => 'dca', 'DCAR_019553' => 'dca', 'DCAR_020952' => 'dca', 'DCAR_021739' => 'dca', 'DCAR_027407' => 'dca', 'DCAR_027913' => 'dca', 'DCAR_028066' => 'dca', 'Dinv05899' => 'din', 'Dinv07563' => 'din', 'Dinv08010' => 'din', 'Dinv14125' => 'din', 'Dinv20172' => 'din', 'Dinv30743' => 'din', 'Dinv31229' => 'din', 'Dinv34162' => 'din', 'Dinv36028' => 'din', 'Dinv39368' => 'din', 'Dinv40565' => 'din', 'Dinv41706' => 'din', 'Duzib052G0089' => 'dzi', 'Duzib116G0641' => 'dzi', 'Duzib132G0069' => 'dzi', 'Duzib132G1219' => 'dzi', 'Duzib147G0278' => 'dzi', 'Duzib160G0480' => 'dzi', 'Duzib170G0661' => 'dzi', 'Duzib177G0591' => 'dzi', 'Duzib187G1353' => 'dzi', 'Duzib192G0858' => 'dzi', 'Duzib192G0883' => 'dzi', 'Duzib213G0506' => 'dzi', 'Duzib235G0289' => 'dzi', 'Duzib251G0422' => 'dzi', 'ECA232G3898' => 'eca', 'ECA233G5950' => 'eca', 'ECA234G1699' => 'eca', 'ECA234G2421' => 'eca', 'ECA236G0426' => 'eca', 'ECA236G4331' => 'eca', 'ECA248G2573' => 'eca', 'EL10Ac1g00077' => 'bvu', 'EL10Ac1g01746' => 'bvu', 'EL10Ac2g03464' => 'bvu', 'EL10Ac4g08176' => 'bvu', 'EL10Ac7g17521' => 'bvu', 'EL10Ac8g20386' => 'bvu', 'EL10Ac9g21343' => 'bvu', 'EL10Ac9g22688' => 'bvu', 'Eucgr.B03434' => 'egr', 'Eucgr.D00618' => 'egr', 'Eucgr.E02395' => 'egr', 'Eucgr.F01129' => 'egr', 'Eucgr.F02622' => 'egr', 'Eucgr.F04207' => 'egr', 'FAN01G0570' => 'fan', 'FAN03G3351' => 'fan', 'FAN06G3702' => 'fan', 'FAN07G2149' => 'fan', 'FAN10G3758' => 'fan', 'FAN11G1170' => 'fan', 'FAN11G2050' => 'fan', 'FAN11G2724' => 'fan', 'FAN12G1700' => 'fan', 'FAN12G2028' => 'fan', 'FAN15G1160' => 'fan', 'FAN15G3063' => 'fan', 'FAN16G2540' => 'fan', 'FAN16G3077' => 'fan', 'FAN16G3624' => 'fan', 'FAN17G0221' => 'fan', 'FAN20G2492' => 'fan', 'FAN20G2905' => 'fan', 'FAN21G0548' => 'fan', 'FAN21G1300' => 'fan', 'FAN22G0077' => 'fan', 'FAN22G1315' => 'fan', 'FAN24G1280' => 'fan', 'FAN24G1445' => 'fan', 'FAN24G3527' => 'fan', 'FAN25G0464' => 'fan', 'FAN25G2885' => 'fan', 'FAN25G3270' => 'fan', 'FAN27G1101' => 'fan', 'FAN27G2846' => 'fan', 'FAN27G3524' => 'fan', 'FvH4_2g11770' => 'fve', 'FvH4_2g15630' => 'fve', 'FvH4_3g05570' => 'fve', 'FvH4_3g09110' => 'fve', 'FvH4_3g19940' => 'fve', 'FvH4_4g04821' => 'fve', 'FvH4_4g31480' => 'fve', 'FvH4_7g01740' => 'fve', 'Glyma.05G130400' => 'gma', 'Glyma.05G156400' => 'gma', 'Glyma.07G197000' => 'gma', 'Glyma.08G085151' => 'gma', 'Glyma.08G114500' => 'gma', 'Glyma.08G300400' => 'gma', 'Glyma.10G215800' => 'gma', 'Glyma.12G224400' => 'gma', 'Glyma.13G179300' => 'gma', 'Glyma.13G218151' => 'gma', 'Glyma.13G238800' => 'gma', 'Glyma.13G276900' => 'gma', 'Glyma.14G078200' => 'gma', 'Glyma.15G074500' => 'gma', 'Glyma.15G094100' => 'gma', 'Glyma.17G247200' => 'gma', 'Glyma.18G120100' => 'gma', 'Glyma.20G176000' => 'gma', 'Gohir.A01G063600' => 'ghi', 'Gohir.A01G170301' => 'ghi', 'Gohir.A02G060500' => 'ghi', 'Gohir.A05G133850' => 'ghi', 'Gohir.A05G161400' => 'ghi', 'Gohir.A06G012900' => 'ghi', 'Gohir.A06G035901' => 'ghi', 'Gohir.A06G127100' => 'ghi', 'Gohir.A06G210500' => 'ghi', 'Gohir.A08G008650' => 'ghi', 'Gohir.A09G072700' => 'ghi', 'Gohir.A09G088301' => 'ghi', 'Gohir.A10G040600' => 'ghi', 'Gohir.A12G036300' => 'ghi', 'Gohir.A12G143350' => 'ghi', 'Gohir.A12G165500' => 'ghi', 'Gohir.A13G145700' => 'ghi', 'Gohir.D01G050000' => 'ghi', 'Gohir.D01G051366' => 'ghi', 'Gohir.D01G161350' => 'ghi', 'Gohir.D02G065900' => 'ghi', 'Gohir.D05G164200' => 'ghi', 'Gohir.D05G355500' => 'ghi', 'Gohir.D06G010400' => 'ghi', 'Gohir.D06G111250' => 'ghi', 'Gohir.D06G132000' => 'ghi', 'Gohir.D06G210500' => 'ghi', 'Gohir.D07G165675' => 'ghi', 'Gohir.D08G062240' => 'ghi', 'Gohir.D08G086101' => 'ghi', 'Gohir.D08G138060' => 'ghi', 'Gohir.D09G072300' => 'ghi', 'Gohir.D10G041400' => 'ghi', 'Gohir.D11G191020' => 'ghi', 'Gohir.D11G212066' => 'ghi', 'Gohir.D12G036300' => 'ghi', 'Gohir.D12G168600' => 'ghi', 'Gohir.D13G150600' => 'ghi', 'Gorai.001G057300' => 'gra', 'Gorai.002G069900' => 'gra', 'Gorai.002G200000' => 'gra', 'Gorai.003G067600' => 'gra', 'Gorai.005G074800' => 'gra', 'Gorai.006G087300' => 'gra', 'Gorai.008G037500' => 'gra', 'Gorai.008G181400' => 'gra', 'Gorai.009G169400' => 'gra', 'Gorai.009G387900' => 'gra', 'Gorai.010G013300' => 'gra', 'Gorai.010G153800' => 'gra', 'Gorai.010G255800' => 'gra', 'Gorai.011G043700' => 'gra', 'Gorai.011G198900' => 'gra', 'Gorai.013G168400' => 'gra', 'GSVIVG01005212001' => 'vvi', 'GSVIVG01006163001' => 'vvi', 'GSVIVG01009625001' => 'vvi', 'GSVIVG01014338001' => 'vvi', 'GSVIVG01020005001' => 'vvi', 'GSVIVG01021450001' => 'vvi', 'GSVIVG01023975001' => 'vvi', 'GSVIVG01034490001' => 'vvi', 'HanXRQChr04g0112071' => 'han', 'HanXRQChr05g0131151' => 'han', 'HanXRQChr09g0262371' => 'han', 'HanXRQChr09g0268401' => 'han', 'HanXRQChr10g0279241' => 'han', 'HanXRQChr10g0297961' => 'han', 'HanXRQChr11g0326231' => 'han', 'HanXRQChr11g0328471' => 'han', 'HanXRQChr16g0507941' => 'han', 'HanXRQChr17g0560211' => 'han', 'Haze_02108' => 'cav', 'Haze_02428' => 'cav', 'Haze_05593' => 'cav', 'Haze_06448' => 'cav', 'Haze_09427' => 'cav', 'Haze_12022' => 'cav', 'Haze_17612' => 'cav', 'Haze_17928' => 'cav', 'Hma1.2p1_0032F.1_g019250' => 'hma', 'Hma1.2p1_0163F.1_g072690' => 'hma', 'Hma1.2p1_0265F.1_g106710' => 'hma', 'Hma1.2p1_0286F.1_g113970' => 'hma', 'Hma1.2p1_0363F.1_g136640' => 'hma', 'Hma1.2p1_0584F.1_g183470' => 'hma', 'Hma1.2p1_0885F.1_g232570' => 'hma', 'HPP92_006022' => 'vpl', 'HPP92_007320' => 'vpl', 'HPP92_011521' => 'vpl', 'HPP92_019387' => 'vpl', 'HPP92_024038' => 'vpl', 'Hund05891' => 'sun', 'Hund06450' => 'sun', 'Hund12053' => 'sun', 'Hund16800' => 'sun', 'Hund21222' => 'sun', 'Hund22896' => 'sun', 'Hund23746' => 'sun', 'Hund27083' => 'sun', 'Lalb_Chr02g0141831' => 'lal', 'Lalb_Chr02g0141841' => 'lal', 'Lalb_Chr05g0220411' => 'lal', 'Lalb_Chr06g0162081' => 'lal', 'Lalb_Chr09g0327651' => 'lal', 'Lalb_Chr13g0295051' => 'lal', 'Lalb_Chr15g0086801' => 'lal', 'Lalb_Chr16g0383781' => 'lal', 'Lalb_Chr16g0383791' => 'lal', 'Lalb_Chr18g0055441' => 'lal', 'Lalb_Chr18g0059611' => 'lal', 'Lalb_Chr20g0109661' => 'lal', 'Lalb_Chr20g0109831' => 'lal', 'Lalb_Chr20g0121871' => 'lal', 'Lalb_Chr22g0355361' => 'lal', 'Lalb_Chr25g0286371' => 'lal', 'Lj1A1187G43' => 'lonja', 'Lj1A1205T50' => 'lonja', 'Lj1A800G33' => 'lonja', 'Lj1C1187T7' => 'lonja', 'Lj1C843T11' => 'lonja', 'Lj1g0010940' => 'lja', 'Lj2A288T69' => 'lonja', 'Lj3g0024276' => 'lja', 'Lj4A47T76' => 'lonja', 'Lj4g0005805' => 'lja', 'Lj4g0006097' => 'lja', 'Lj4g0008528' => 'lja', 'Lj4g0024907' => 'lja', 'Lj5g0012472' => 'lja', 'Lj5g0018648' => 'lja', 'Lj6C789G1' => 'lonja', 'Lj6g0004000' => 'lja', 'Lj7A292G67' => 'lonja', 'Lj7A292T64' => 'lonja', 'Lj9A400T58' => 'lonja', 'Lsat_1_v5_gn_1_126181' => 'lsa', 'Lsat_1_v5_gn_4_123041' => 'lsa', 'Lsat_1_v5_gn_4_133620' => 'lsa', 'Lsat_1_v5_gn_4_53221' => 'lsa', 'Lsat_1_v5_gn_4_71961' => 'lsa', 'Lsat_1_v5_gn_7_105241' => 'lsa', 'Lsat_1_v5_gn_7_21361' => 'lsa', 'Lsat_1_v5_gn_7_28860' => 'lsa', 'Lsat_1_v5_gn_7_31260' => 'lsa', 'Lsat_1_v5_gn_8_52801' => 'lsa', 'Manes.02G191400' => 'mes', 'Manes.03G110100' => 'mes', 'Manes.04G071100' => 'mes', 'Manes.05G100500' => 'mes', 'Manes.05G164700' => 'mes', 'Manes.15G087000' => 'mes', 'Manes.15G121500' => 'mes', 'Manes.16G028300' => 'mes', 'Manes.17G046100' => 'mes', 'Manes.17G069800' => 'mes', 'Manes.18G100500' => 'mes', 'Mapoly0002s0109' => 'mpo', 'Mapoly0024s0007' => 'mpo', 'Mapoly0089s0032' => 'mpo', 'MBI04_g42241_MAGBIO' => 'mbi', 'MBI05_g11988_MAGBIO' => 'mbi', 'MBI05_g35452_MAGBIO' => 'mbi', 'MBI07_g30179_MAGBIO' => 'mbi', 'MBI07_g35859_MAGBIO' => 'mbi', 'MBI07_g35860_MAGBIO' => 'mbi', 'MBI07_g37166_MAGBIO' => 'mbi', 'MBI08_g18172_MAGBIO' => 'mbi', 'MBI09_g08441_MAGBIO' => 'mbi', 'MBI13_g01676_MAGBIO' => 'mbi', 'MBI14_g42955_MAGBIO' => 'mbi', 'MBI16_g13161_MAGBIO' => 'mbi', 'MBI17_g27204_MAGBIO' => 'mbi', 'MBI19_g21595_MAGBIO' => 'mbi', 'MD00G1148400' => 'mdo', 'MD02G1301200' => 'mdo', 'MD03G1227800' => 'mdo', 'MD05G1041100' => 'mdo', 'MD05G1124800' => 'mdo', 'MD05G1284000' => 'mdo', 'MD05G1338800' => 'mdo', 'MD05G1338900' => 'mdo', 'MD07G1022800' => 'mdo', 'MD10G1047500' => 'mdo', 'MD10G1127500' => 'mdo', 'MD10G1262300' => 'mdo', 'MD10G1293800' => 'mdo', 'MD16G1074300' => 'mdo', 'Medtr1g021670' => 'mtr', 'Medtr1g096320' => 'mtr', 'Medtr2g013690' => 'mtr', 'Medtr2g019450' => 'mtr', 'Medtr2g085170' => 'mtr', 'Medtr4g088785' => 'mtr', 'Medtr8g055930' => 'mtr', 'Medtr8g085850' => 'mtr', 'MELO3C002605.2' => 'cme', 'MELO3C003891.2' => 'cme', 'MELO3C004012.2' => 'cme', 'MELO3C007134.2' => 'cme', 'MELO3C008118.2' => 'cme', 'MELO3C016700.2' => 'cme', 'MELO3C024127.2' => 'cme', 'MELO3C033361.2' => 'cme', 'MELO3C033362.2' => 'cme', 'Migut.C00430' => 'egut', 'Migut.C01246' => 'egut', 'Migut.E00101' => 'egut', 'Migut.H01486' => 'egut', 'Migut.H01939' => 'egut', 'Migut.K00360' => 'egut', 'Migut.M00910' => 'egut', 'Migut.M01139' => 'egut', 'Migut.N02677' => 'egut', 'MSTRG.13252' => 'ama', 'MSTRG.14701' => 'ama', 'MSTRG.1521' => 'ama', 'MSTRG.15884' => 'ama', 'MSTRG.16242' => 'ama', 'MSTRG.22285' => 'ama', 'MSTRG.22444' => 'ama', 'MSTRG.2349' => 'ama', 'MSTRG.26308' => 'ama', 'MSTRG.28296' => 'ama', 'MSTRG.9895' => 'ama', 'Nitab4.5_0000110g0060' => 'nta', 'Nitab4.5_0000420g0130' => 'nta', 'Nitab4.5_0000422g0030' => 'nta', 'Nitab4.5_0000560g0180' => 'nta', 'Nitab4.5_0000703g0100' => 'nta', 'Nitab4.5_0000786g0200' => 'nta', 'Nitab4.5_0001336g0020' => 'nta', 'Nitab4.5_0001796g0030' => 'nta', 'Nitab4.5_0003348g0060' => 'nta', 'Nitab4.5_0003698g0040' => 'nta', 'Nitab4.5_0003942g0090' => 'nta', 'Nitab4.5_0004775g0070' => 'nta', 'Nitab4.5_0004864g0030' => 'nta', 'Nitab4.5_0005615g0020' => 'nta', 'Nitab4.5_0009288g0030' => 'nta', 'Nitab4.5_0009341g0010' => 'nta', 'Nitab4.5_0009535g0010' => 'nta', 'Nn1g03995' => 'nnu', 'Nn1g04100' => 'nnu', 'Nn1g06530' => 'nnu', 'Nn3g16404' => 'nnu', 'Nn3g17212' => 'nnu', 'Nn3g20776' => 'nnu', 'Nn3g21923' => 'nnu', 'Nn5g27737' => 'nnu', 'Nn5g29461' => 'nnu', 'Nn7g38355' => 'nnu', 'Nn8g39873' => 'nnu', 'Oeu000548.2' => 'oeu', 'Oeu004672.1' => 'oeu', 'Oeu015605.2' => 'oeu', 'Oeu016092.1' => 'oeu', 'Oeu017879.3' => 'oeu', 'Oeu024910.1' => 'oeu', 'Oeu028965.1' => 'oeu', 'Oeu031269.1' => 'oeu', 'Oeu031270.1' => 'oeu', 'Oeu032535.1' => 'oeu', 'Oeu034151.1' => 'oeu', 'Oeu034152.1' => 'oeu', 'Oeu034588.2' => 'oeu', 'Oeu050846.1' => 'oeu', 'Oeu050849.2' => 'oeu', 'Oeu051063.2' => 'oeu', 'Oeu052368.1' => 'oeu', 'Oeu052370.1' => 'oeu', 'Os01g0210400' => 'osa', 'Os01g0304300' => 'osa', 'Os01g0749100' => 'osa', 'Os02g0745800' => 'osa', 'Os03g0769050' => 'osa', 'Os05g0531500' => 'osa', 'Os06g0724300' => 'osa', 'Os11g0198100' => 'osa', 'Peaxi162Scf00069g01425' => 'pax', 'Peaxi162Scf00280g00811' => 'pax', 'Peaxi162Scf00310g00615' => 'pax', 'Peaxi162Scf00362g00542' => 'pax', 'Peaxi162Scf00461g00310' => 'pax', 'Peaxi162Scf00530g00118' => 'pax', 'Peaxi162Scf00541g00057' => 'pax', 'Peaxi162Scf00661g00017' => 'pax', 'Peaxi162Scf00926g00027' => 'pax', 'Peaxi162Scf01064g00263' => 'pax', 'Peaxi162Scf01211g00135' => 'pax', 'PGR004G2336' => 'pgr', 'PGR042G0327' => 'pgr', 'PGR042G1957' => 'pgr', 'PGR042G2003' => 'pgr', 'PGR042G3929' => 'pgr', 'PGR083G1137' => 'pgr', 'PGR083G1364' => 'pgr', 'PGSC0003DMG400003381' => 'stu', 'PGSC0003DMG400003417' => 'stu', 'PGSC0003DMG400008981' => 'stu', 'PGSC0003DMG400012417' => 'stu', 'PGSC0003DMG400012823' => 'stu', 'PGSC0003DMG400016885' => 'stu', 'PGSC0003DMG400022812' => 'stu', 'PGSC0003DMG400029726' => 'stu', 'PGSC0003DMG401009243' => 'stu', 'PGSC0003DMG401031505' => 'stu', 'PGSC0003DMG402031505' => 'stu', 'Phvul.001G017600' => 'pvu', 'Phvul.002G193500' => 'pvu', 'Phvul.002G228900' => 'pvu', 'Phvul.002G236800' => 'pvu', 'Phvul.003G049500' => 'pvu', 'Phvul.005G072000' => 'pvu', 'Phvul.006G164800' => 'pvu', 'Phvul.006G185100' => 'pvu', 'Phvul.007G090000' => 'pvu', 'Potri.001G399800' => 'ptr', 'Potri.002G149900' => 'ptr', 'Potri.004G044100' => 'ptr', 'Potri.004G177600' => 'ptr', 'Potri.009G138000' => 'ptr', 'Potri.010G094000' => 'ptr', 'Potri.011G053000' => 'ptr', 'Potri.011G119300' => 'ptr', 'Potri.013G113700' => 'ptr', 'Potri.018G107800' => 'ptr', 'Potri.019G084100' => 'ptr', 'Pp3c14_23720' => 'ppa', 'Pp3c16_6340' => 'ppa', 'Pp3c23_13420' => 'ppa', 'Pp3c24_2740' => 'ppa', 'Pp3c25_860' => 'ppa', 'Pp3c8_21750' => 'ppa', 'Prupe.1G273000' => 'ppe', 'Prupe.1G273700' => 'ppe', 'Prupe.1G274100' => 'ppe', 'Prupe.2G023300' => 'ppe', 'Prupe.4G048000' => 'ppe', 'Prupe.4G080400' => 'ppe', 'Prupe.4G181200' => 'ppe', 'Prupe.8G056900' => 'ppe', 'Prupe.8G168700' => 'ppe', 'Psat1g189080' => 'psa', 'Psat1g204760' => 'psa', 'Psat4g175560' => 'psa', 'Psat4g177720' => 'psa', 'Psat5g244240' => 'psa', 'Psat6g010720' => 'psa', 'Psat6g187200' => 'psa', 'Psat7g072040' => 'psa', 'PSO017G3501' => 'pso', 'PSO063G2148' => 'pso', 'PSO063G5608' => 'pso', 'PSO210G6392' => 'pso', 'PSO541G2319' => 'pso', 'PSO541G2836' => 'pso', 'PSO541G4012' => 'pso', 'PSO541G6253' => 'pso', 'PSO675G0580' => 'pso', 'PSO675G0856' => 'pso', 'PSO675G5635' => 'pso', 'PSO675G9157' => 'pso', 'PSO832G1660' => 'pso', 'PSO832G1969' => 'pso', 'QL02p007186' => 'qlo', 'QL02p033904' => 'qlo', 'QL03p064391' => 'qlo', 'QL05p040593' => 'qlo', 'QL05p058242' => 'qlo', 'QL08p021825' => 'qlo', 'QL11p004981' => 'qlo', 'RcHm_v2.0_Chr1g0318301' => 'rch', 'RcHm_v2.0_Chr4g0418501' => 'rch', 'RcHm_v2.0_Chr4g0439971' => 'rch', 'RcHm_v2.0_Chr5g0008541' => 'rch', 'RcHm_v2.0_Chr5g0014101' => 'rch', 'RcHm_v2.0_Chr5g0014131' => 'rch', 'RcHm_v2.0_Chr5g0033621' => 'rch', 'RcHm_v2.0_Chr6g0272041' => 'rch', 'RcHm_v2.0_Chr6g0278831' => 'rch', 'Rhsim02G0130400' => 'rsi', 'Rhsim02G0171100' => 'rsi', 'Rhsim05G0053000' => 'rsi', 'Rhsim05G0053100' => 'rsi', 'Rhsim06G0096500' => 'rsi', 'Rhsim06G0096600' => 'rsi', 'Rhsim06G0199100' => 'rsi', 'Rhsim12G0062300' => 'rsi', 'Rhsim12G0062800' => 'rsi', 'Sabra02G0118600' => 'sbr', 'Sabra04G0027300' => 'sbr', 'Sabra04G0119500' => 'sbr', 'Sabra08G0112500' => 'sbr', 'Sabra11G0036800' => 'sbr', 'Sabra11G0103800' => 'sbr', 'Sabra13G0096300' => 'sbr', 'Sabra16G0262300' => 'sbr', 'Sabra18G0091700' => 'sbr', 'Sabra19G0095400' => 'sbr', 'SalBow6G3080' => 'sbo', 'SalBow7G1157' => 'sbo', 'SalBow7G2123' => 'sbo', 'SalBow7G2285' => 'sbo', 'SalBow7G3537' => 'sbo', 'SalBow8G2947' => 'sbo', 'SalBow8G4463' => 'sbo', 'SalBow8G5466' => 'sbo', 'Sc01g0001750' => 'sci', 'Sc02g0006640' => 'sci', 'Sc02g0006670' => 'sci', 'Sc04g0008220' => 'sci', 'Sc05g0006190' => 'sci', 'Sc08g0002760' => 'sci', 'Sc17g0006170' => 'sci', 'Sc22g0002050' => 'sci', 'Sc23g0001190' => 'sci', 'Sc24g0000980' => 'sci', 'Sed0006245' => 'sed', 'Sed0007543' => 'sed', 'Sed0009411' => 'sed', 'Sed0010765' => 'sed', 'Sed0012944' => 'sed', 'Sed0014682' => 'sed', 'Sed0016174' => 'sed', 'Sed0016796' => 'sed', 'Sed0020317' => 'sed', 'Sed0021467' => 'sed', 'SEGI_01316' => 'sgi', 'SEGI_03374' => 'sgi', 'SEGI_16265' => 'sgi', 'SEGI_18569' => 'sgi', 'SEGI_20351' => 'sgi', 'SEGI_26395' => 'sgi', 'SEGI_29469' => 'sgi', 'SEGI_34771' => 'sgi', 'SEGI_36769' => 'sgi', 'SEGI_37139' => 'sgi', 'SGA_v2.0_scaffold100G29687' => 'sas', 'SGA_v2.0_scaffold118G32472' => 'sas', 'SGA_v2.0_scaffold14G07051' => 'sas', 'SGA_v2.0_scaffold183G39845' => 'sas', 'SGA_v2.0_scaffold1G00174' => 'sas', 'SGA_v2.0_scaffold22G09714' => 'sas', 'SGA_v2.0_scaffold333G48992' => 'sas', 'SGA_v2.0_scaffold46G17491' => 'sas', 'SGA_v2.0_scaffold49G18294' => 'sas', 'SGA_v2.0_scaffold63G21658' => 'sas', 'SHI01741' => 'shi', 'SHI05771' => 'shi', 'SHI18077' => 'shi', 'SHI20525' => 'shi', 'SHI20527' => 'shi', 'SHI20528' => 'shi', 'SMO172G0185' => 'smo', 'SMO198G0020' => 'smo', 'SMO351G0006' => 'smo', 'SMO356G0118' => 'smo', 'SMO358G0296' => 'smo', 'SMO367G0079' => 'smo', 'SMO367G1277' => 'smo', 'Solyc01g014220.3' => 'sly', 'Solyc01g111770.2' => 'sly', 'Solyc02g078180.3' => 'sly', 'Solyc03g006430.3' => 'sly', 'Solyc03g006456.1' => 'sly', 'Solyc03g079860.2' => 'sly', 'Solyc04g079770.3' => 'sly', 'Solyc05g007430.4' => 'sly', 'Solyc07g063150.3' => 'sly', 'Solyc08g016620.3' => 'sly', 'Solyc09g057590.3' => 'sly', 'Solyc09g057600.1' => 'sly', 'Solyc10g009050.3' => 'sly', 'Solyc11g017420.2' => 'sly', 'Sopen01g053810' => 'spe', 'Sopen02g023040' => 'spe', 'Sopen03g002440' => 'spe', 'Sopen04g033350' => 'spe', 'Sopen05g003310' => 'spe', 'Sopen07g004050' => 'spe', 'Sopen07g031340' => 'spe', 'Sopen08g006990' => 'spe', 'Sopen10g004830' => 'spe', 'Sopen11g009370' => 'spe', 'Sp1g24450' => 'spa', 'Sp1g29670' => 'spa', 'Sp1g39600' => 'spa', 'Sp2g11080' => 'spa', 'Sp2g13970' => 'spa', 'Sp4g16130' => 'spa', 'Sp6g13080' => 'spa', 'Sp7g37270' => 'spa', 'TAR371G0065' => 'tar', 'TAR376G0340' => 'tar', 'TAR376G0435' => 'tar', 'TAR381G0002' => 'tar', 'TAR381G1236' => 'tar', 'TAR624G0055' => 'tar', 'TAR624G0324' => 'tar', 'TAR624G0696' => 'tar', 'TAR624G0906' => 'tar', 'TAR625G0107' => 'tar', 'TAR626G0015' => 'tar', 'TAR626G1356' => 'tar', 'TAR627G0888' => 'tar', 'TAR628G0399' => 'tar', 'TAR628G1327' => 'tar', 'TAR629G2831' => 'tar', 'TAR629G2874' => 'tar', 'TAR633G1432' => 'tar', 'TAR633G2771' => 'tar', 'THA.LOC104803394' => 'tha', 'THA.LOC104805153' => 'tha', 'THA.LOC104806784' => 'tha', 'THA.LOC104810473' => 'tha', 'THA.LOC104813100' => 'tha', 'THA.LOC104814215' => 'tha', 'THA.LOC104815554' => 'tha', 'THA.LOC104820544' => 'tha', 'THA.LOC104824754' => 'tha', 'THA.LOC104827717' => 'tha', 'Thecc.02G031400' => 'tca', 'Thecc.02G055900' => 'tca', 'Thecc.02G350800' => 'tca', 'Thecc.06G150900' => 'tca', 'Thecc.06G186600' => 'tca', 'Thecc.07G089600' => 'tca', 'Thecc.08G020400' => 'tca', 'Thecc.08G182100' => 'tca', 'Thhalv10000873m.g' => 'esa', 'Thhalv10004185m.g' => 'esa', 'Thhalv10006981m.g' => 'esa', 'Thhalv10007204m.g' => 'esa', 'Thhalv10011374m.g' => 'esa', 'Thhalv10013482m.g' => 'esa', 'Thhalv10017801m.g' => 'esa', 'Thhalv10024983m.g' => 'esa', 'TPR.G12072' => 'tpr', 'TPR.G15769' => 'tpr', 'TPR.G16504' => 'tpr', 'TPR.G16506' => 'tpr', 'TPR.G24345' => 'tpr', 'TPR.G26666' => 'tpr', 'TPR.G27320' => 'tpr', 'TPR.G31819' => 'tpr', 'TPR.G38879' => 'tpr', 'TPR.G39015' => 'tpr', 'TPR.G8819' => 'tpr', 'TWI09G0924' => 'twi', 'TWI12G0811' => 'twi', 'TWI12G1294' => 'twi', 'TWI31G0150' => 'twi', 'TWI36G1262' => 'twi', 'TWI38G1287' => 'twi', 'TWI38G1633' => 'twi', 'TWI38G1982' => 'twi', 'TWI39G0116' => 'twi', 'TWI60G1011' => 'twi', 'TWI63G0171' => 'twi', 'TWI73G0839' => 'twi', 'TWI79G1511' => 'twi', 'unitig_0.g915' => 'ugi', 'unitig_0.g916' => 'ugi', 'unitig_21.g20219' => 'ugi', 'unitig_21.g20416' => 'ugi', 'unitig_578.g16132' => 'ugi', 'unitig_578.g16718' => 'ugi', 'unitig_62.g23481' => 'ugi', 'unitig_744.g24535' => 'ugi', 'unitig_749.g13525' => 'ugi', 'vmacro01248' => 'vma', 'vmacro02290' => 'vma', 'vmacro10946' => 'vma', 'vmacro11865' => 'vma', 'vmacro12493' => 'vma', 'vmacro17322' => 'vma', 'vmacro21599' => 'vma', 'vmacro23041' => 'vma', 'VMungo0251G0004' => 'vmu', 'VMungo0251G2639' => 'vmu', 'VMungo0251G2967' => 'vmu', 'VMungo0540G0864' => 'vmu', 'VMungo0540G1569' => 'vmu', 'VMungo0647G0317' => 'vmu', 'VMungo0720G1373' => 'vmu', 'VMungo0720G1508' => 'vmu', 'VMungo1080G0485' => 'vmu', 'VMungo1215G3177' => 'vmu', 'Zm00001eb112600' => 'zma', 'Zm00001eb120220' => 'zma', 'Zm00001eb153240' => 'zma', 'Zm00001eb168880' => 'zma', 'Zm00001eb213920' => 'zma', 'Zm00001eb228280' => 'zma', 'Zm00001eb254580' => 'zma', 'Zm00001eb272180' => 'zma', 'Zm00001eb293190' => 'zma', 'Zm00001eb322930' => 'zma', 'Zm00001eb353360' => 'zma', 'Zm00001eb353390' => 'zma', 'Zm00001eb353430' => 'zma', 'Zm00001eb353440' => 'zma', 'Zm00001eb353780' => 'zma' ), 'gf_id' => 'HOM05D000499', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000499' ), 'data_identifier' => 'HOM05D000499', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000499', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1066', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p29780' => 'bna', 'A02p33180' => 'bna', 'A03p16470' => 'bna', 'A03p66010' => 'bna', 'A04p25970' => 'bna', 'A06p01270' => 'bna', 'A06p46080' => 'bna', 'A07p11400' => 'bna', 'A08p01840' => 'bna', 'A08p08230' => 'bna', 'A08p25740' => 'bna', 'A09p32070' => 'bna', 'A09p37830' => 'bna', 'A09p42840' => 'bna', 'A09p42850' => 'bna', 'Aa31LG10G2060' => 'aar', 'Aa31LG2G7410' => 'aar', 'Aa31LG6G10200' => 'aar', 'Aa31LG6G16680' => 'aar', 'Aa31LG6G8470' => 'aar', 'Aa31LG9G12730' => 'aar', 'Aa31LG9G13680' => 'aar', 'Aa31LG9G14920' => 'aar', 'Aa31LG9G6650' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4977' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5467' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3254' => 'aag', 'Actinidia02578' => 'ach', 'Actinidia07693' => 'ach', 'Actinidia08413' => 'ach', 'Actinidia08414' => 'ach', 'Actinidia15289' => 'ach', 'Actinidia19871' => 'ach', 'Actinidia21475' => 'ach', 'Actinidia22576' => 'ach', 'Actinidia28327' => 'ach', 'Actinidia32491' => 'ach', 'Actinidia39463' => 'ach', 'Actinidia39571' => 'ach', 'Ah.01g013750' => 'amhyb', 'Ah.01g023210' => 'amhyb', 'Ah.04g164850' => 'amhyb', 'Ah.05g178060' => 'amhyb', 'Ah.07g204270' => 'amhyb', 'Ah.07g208480' => 'amhyb', 'Ah.09g237410' => 'amhyb', 'Ah.14g089460' => 'amhyb', 'AL1G41790' => 'aly', 'AL1G49050' => 'aly', 'AL1G53810' => 'aly', 'AL1G61400' => 'aly', 'AL4G18580' => 'aly', 'AL5G12510' => 'aly', 'AL5G12540' => 'aly', 'AL6G43230' => 'aly', 'AL7G10370' => 'aly', 'AL7G19250' => 'aly', 'AL8G12240' => 'aly', 'AL8G18540' => 'aly', 'Aqoxy1G02409' => 'aox', 'Aqoxy2G03993' => 'aox', 'Aqoxy3G03357' => 'aox', 'Aqoxy4G00785' => 'aox', 'Aqoxy5G02598' => 'aox', 'Aqoxy6G00132' => 'aox', 'Aqoxy7G01776' => 'aox', 'Aqoxy7G02316' => 'aox', 'Aqoxy7G03973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.12AFKW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B8730' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27IQR1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3F75VG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3RE0GA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41TCQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.527VTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FIR39' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5W8UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DA38EV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ63HS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H1I32C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HC27T5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4M8AP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7N3CZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9UVDZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LS1NQA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT1D4B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SKC4TM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCFV76' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF9Q1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQWD9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1ZM88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WE07RT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YCK7VH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJE6Q6' => 'arhy', 'AT1G28240' => 'ath', 'AT1G34550' => 'ath', 'AT1G53040' => 'ath', 'AT2G02910' => 'ath', 'AT4G09630' => 'ath', 'AT4G38500' => 'ath', 'AT5G42660' => 'ath', 'AT5G46220' => 'ath', 'ATR0152G026' => 'atr', 'ATR0564G343' => 'atr', 'ATR0706G151' => 'atr', 'ATR0733G207' => 'atr', 'ATR0751G234' => 'atr', 'ATR0807G048' => 'atr', 'ATR1091G084' => 'atr', 'Atru.chr10.1229' => 'acertr', 'Atru.chr10.1230' => 'acertr', 'Atru.chr10.1874' => 'acertr', 'Atru.chr11.1808' => 'acertr', 'Atru.chr13.1795' => 'acertr', 'Atru.chr13.570' => 'acertr', 'Atru.chr2.2608' => 'acertr', 'Atru.chr2.2609' => 'acertr', 'Atru.chr5.3428' => 'acertr', 'Atru.chr8.1171' => 'acertr', 'AUR62004651' => 'cqu', 'AUR62008675' => 'cqu', 'AUR62010014' => 'cqu', 'AUR62013004' => 'cqu', 'AUR62014825' => 'cqu', 'AUR62015015' => 'cqu', 'AUR62015151' => 'cqu', 'AUR62017020' => 'cqu', 'AUR62019422' => 'cqu', 'AUR62023570' => 'cqu', 'AUR62025571' => 'cqu', 'AUR62029098' => 'cqu', 'AUR62033863' => 'cqu', 'AUR62034296' => 'cqu', 'AUR62040075' => 'cqu', 'BcaB02g07334' => 'bca', 'BcaB02g10575' => 'bca', 'BcaB03g12119' => 'bca', 'BcaB03g12120' => 'bca', 'BcaB03g13945' => 'bca', 'BcaB04g17123' => 'bca', 'BcaB04g17867' => 'bca', 'BcaB04g19839' => 'bca', 'BcaB07g30317' => 'bca', 'BcaB07g32432' => 'bca', 'BcaB07g33362' => 'bca', 'BcaB08g36611' => 'bca', 'BcaC01g00028' => 'bca', 'BcaC01g01356' => 'bca', 'BcaC01g02034' => 'bca', 'BcaC01g06051' => 'bca', 'BcaC03g16839' => 'bca', 'BcaC03g17176' => 'bca', 'BcaC05g26829' => 'bca', 'BcaC06g31490' => 'bca', 'BcaC06g35344' => 'bca', 'BcaC06g36570' => 'bca', 'BcaC07g37537' => 'bca', 'BcaC08g43491' => 'bca', 'BcaC08g43773' => 'bca', 'BcaNung00234' => 'bca', 'BcaNung01982' => 'bca', 'BcaNung03707' => 'bca', 'BcaNung06454' => 'bca', 'BolC2t10762H' => 'bol', 'BolC2t11191H' => 'bol', 'BolC3t14322H' => 'bol', 'BolC3t19747H' => 'bol', 'BolC3t21425H' => 'bol', 'BolC4t27800H' => 'bol', 'BolC5t31423H' => 'bol', 'BolC6t35951H' => 'bol', 'BolC6t36282H' => 'bol', 'BolC7t40678H' => 'bol', 'BolC7t40679H' => 'bol', 'BolC7t42222H' => 'bol', 'BolC7t43492H' => 'bol', 'BolC7t46785H' => 'bol', 'BolC8t47853H' => 'bol', 'BolC9t56805H' => 'bol', 'BraA02t08000Z' => 'bra', 'BraA02t08341Z' => 'bra', 'BraA03t10936Z' => 'bra', 'BraA03t15657Z' => 'bra', 'BraA04t18100Z' => 'bra', 'BraA05t20523Z' => 'bra', 'BraA06t23353Z' => 'bra', 'BraA06t27473Z' => 'bra', 'BraA06t27769Z' => 'bra', 'BraA07t28928Z' => 'bra', 'BraA08t32236Z' => 'bra', 'BraA08t32841Z' => 'bra', 'BraA08t34524Z' => 'bra', 'BraA09t38742Z' => 'bra', 'BraA09t39295Z' => 'bra', 'C02p47180' => 'bna', 'C02p50990' => 'bna', 'C03p19360' => 'bna', 'C03p74950' => 'bna', 'C03p91000' => 'bna', 'C04p63260' => 'bna', 'C05p27050' => 'bna', 'C06p08750' => 'bna', 'C06p11490' => 'bna', 'C07p02820' => 'bna', 'C07p17180' => 'bna', 'C07p29440' => 'bna', 'C07p63730' => 'bna', 'C09p39260' => 'bna', 'CAN.G1164.34' => 'can', 'CAN.G1164.39' => 'can', 'CAN.G1530.3' => 'can', 'CAN.G162.61' => 'can', 'CAN.G176.6' => 'can', 'CAN.G289.49' => 'can', 'CAN.G370.21' => 'can', 'CAN.G370.22' => 'can', 'CAN.G371.117' => 'can', 'CAN.G58.37' => 'can', 'CAN.G588.98' => 'can', 'CANSAT21G2266' => 'cansat', 'CANSAT25G2799' => 'cansat', 'CANSAT35G0862' => 'cansat', 'CANSAT35G1704' => 'cansat', 'CANSAT35G1760' => 'cansat', 'CANSAT56G3971' => 'cansat', 'CANSAT56G4116' => 'cansat', 'CANSAT80G1259' => 'cansat', 'CARHR027730' => 'chi', 'CARHR033880' => 'chi', 'CARHR043270' => 'chi', 'CARHR145330' => 'chi', 'CARHR145340' => 'chi', 'CARHR175570' => 'chi', 'CARHR181570' => 'chi', 'CARHR258470' => 'chi', 'CARHR260490' => 'chi', 'CARHR294220' => 'chi', 'Carub.0001s2668' => 'cru', 'Carub.0001s3257' => 'cru', 'Carub.0001s4220' => 'cru', 'Carub.0005s0179' => 'cru', 'Carub.0006s2807' => 'cru', 'Carub.0007s0039' => 'cru', 'Carub.0008s0169' => 'cru', 'Carub.0008s0636' => 'cru', 'Ca_00338_v3' => 'car', 'Ca_00542_v3' => 'car', 'Ca_01844_v3' => 'car', 'Ca_10611_v3' => 'car', 'Ca_13326_v3' => 'car', 'Ca_17944_v3' => 'car', 'Ca_18546_v3' => 'car', 'Ca_24219_v3' => 'car', 'Ca_29972_v3' => 'car', 'CBR_g3681' => 'cbr', 'CBR_g40021' => 'cbr', 'Cc01_g08140' => 'ccan', 'Cc02_g13410' => 'ccan', 'Cc02_g37480' => 'ccan', 'Cc05_g12030' => 'ccan', 'Cc09_g03370' => 'ccan', 'Cc09_g10300' => 'ccan', 'Cc10_g03530' => 'ccan', 'Cc10_g11380' => 'ccan', 'CDE01G0176' => 'cde', 'CDE02G0675' => 'cde', 'CDE02G0942' => 'cde', 'CDE02G1153' => 'cde', 'CDE02G4177' => 'cde', 'CDE04G2117' => 'cde', 'CDE04G2736' => 'cde', 'CDE08G1161' => 'cde', 'CDE09G1238' => 'cde', 'Cfa000467' => 'cfa', 'Cfa000947' => 'cfa', 'Cfa004969' => 'cfa', 'Cfa005284' => 'cfa', 'Cfa008993' => 'cfa', 'Cfa018187' => 'cfa', 'Cfa018454' => 'cfa', 'Cfa020585' => 'cfa', 'Ciclev10000424m.g' => 'ccl', 'Ciclev10003605m.g' => 'ccl', 'Ciclev10007828m.g' => 'ccl', 'Ciclev10014620m.g' => 'ccl', 'Ciclev10015169m.g' => 'ccl', 'Ciclev10018291m.g' => 'ccl', 'Ciclev10028256m.g' => 'ccl', 'Ciclev10033822m.g' => 'ccl', 'CiPaw.05G060300' => 'cil', 'CiPaw.05G085000' => 'cil', 'CiPaw.06G083700' => 'cil', 'CiPaw.06G120300' => 'cil', 'CiPaw.09G060500' => 'cil', 'CiPaw.09G123800' => 'cil', 'CiPaw.11G169700' => 'cil', 'CiPaw.12G118300' => 'cil', 'CiPaw.15G071000' => 'cil', 'CiPaw.15G081900' => 'cil', 'ClCG01G024610' => 'cla', 'ClCG03G006070' => 'cla', 'ClCG05G019250' => 'cla', 'ClCG09G009500' => 'cla', 'ClCG11G008200' => 'cla', 'ClCG11G018080' => 'cla', 'COL.COLO4_17373' => 'col', 'COL.COLO4_22994' => 'col', 'COL.COLO4_26389' => 'col', 'COL.COLO4_27170' => 'col', 'COL.COLO4_31074' => 'col', 'COL.COLO4_31465' => 'col', 'COL.COLO4_36438' => 'col', 'COL.COLO4_36439' => 'col', 'Cpa.g.c38781' => 'cpa', 'Cpa.g.sc128.12' => 'cpa', 'Cpa.g.sc166.7' => 'cpa', 'Cpa.g.sc166.8' => 'cpa', 'Cpa.g.sc20.111' => 'cpa', 'Cpa.g.sc27.31' => 'cpa', 'Cpa.g.sc64.36' => 'cpa', 'Cpa.g.sc64.37' => 'cpa', 'Cpa.g.sc66.49' => 'cpa', 'Cpa.g.sc80.64' => 'cpa', 'CsaV3_1G012320' => 'csa', 'CsaV3_2G008480' => 'csa', 'CsaV3_2G033450' => 'csa', 'CsaV3_3G044830' => 'csa', 'CsaV3_4G033710' => 'csa', 'CsaV3_6G051730' => 'csa', 'CsaV3_7G025350' => 'csa', 'CSS0001067' => 'camsi', 'CSS0005996' => 'camsi', 'CSS0006590' => 'camsi', 'CSS0009673' => 'camsi', 'CSS0010201' => 'camsi', 'CSS0010549' => 'camsi', 'CSS0011364' => 'camsi', 'CSS0014473' => 'camsi', 'CSS0014961' => 'camsi', 'CSS0020191' => 'camsi', 'CSS0021165' => 'camsi', 'CSS0022306' => 'camsi', 'CSS0030591' => 'camsi', 'CSS0030696' => 'camsi', 'CSS0032653' => 'camsi', 'CSS0037487' => 'camsi', 'CSS0041102' => 'camsi', 'CSS0041261' => 'camsi', 'CSS0046246' => 'camsi', 'CSS0049256' => 'camsi', 'DCAR_004075' => 'dca', 'DCAR_011538' => 'dca', 'DCAR_019553' => 'dca', 'DCAR_020952' => 'dca', 'DCAR_021739' => 'dca', 'DCAR_027407' => 'dca', 'DCAR_027913' => 'dca', 'DCAR_028066' => 'dca', 'Dinv05899' => 'din', 'Dinv07563' => 'din', 'Dinv08010' => 'din', 'Dinv14125' => 'din', 'Dinv20172' => 'din', 'Dinv30743' => 'din', 'Dinv31229' => 'din', 'Dinv34162' => 'din', 'Dinv36028' => 'din', 'Dinv39368' => 'din', 'Dinv40565' => 'din', 'Dinv41706' => 'din', 'Duzib052G0089' => 'dzi', 'Duzib116G0641' => 'dzi', 'Duzib132G0069' => 'dzi', 'Duzib132G1219' => 'dzi', 'Duzib147G0278' => 'dzi', 'Duzib160G0480' => 'dzi', 'Duzib170G0661' => 'dzi', 'Duzib177G0591' => 'dzi', 'Duzib187G1353' => 'dzi', 'Duzib192G0858' => 'dzi', 'Duzib192G0883' => 'dzi', 'Duzib213G0506' => 'dzi', 'Duzib235G0289' => 'dzi', 'Duzib251G0422' => 'dzi', 'ECA232G3898' => 'eca', 'ECA233G5950' => 'eca', 'ECA234G1699' => 'eca', 'ECA234G2421' => 'eca', 'ECA236G0426' => 'eca', 'ECA236G4331' => 'eca', 'ECA248G2573' => 'eca', 'EL10Ac1g00077' => 'bvu', 'EL10Ac1g01746' => 'bvu', 'EL10Ac2g03464' => 'bvu', 'EL10Ac4g08176' => 'bvu', 'EL10Ac7g17521' => 'bvu', 'EL10Ac8g20386' => 'bvu', 'EL10Ac9g21343' => 'bvu', 'EL10Ac9g22688' => 'bvu', 'Eucgr.B03434' => 'egr', 'Eucgr.D00618' => 'egr', 'Eucgr.E02395' => 'egr', 'Eucgr.F01129' => 'egr', 'Eucgr.F02622' => 'egr', 'Eucgr.F04207' => 'egr', 'FAN01G0570' => 'fan', 'FAN03G3351' => 'fan', 'FAN06G3702' => 'fan', 'FAN07G2149' => 'fan', 'FAN10G3758' => 'fan', 'FAN11G1170' => 'fan', 'FAN11G2050' => 'fan', 'FAN11G2724' => 'fan', 'FAN12G1700' => 'fan', 'FAN12G2028' => 'fan', 'FAN15G1160' => 'fan', 'FAN15G3063' => 'fan', 'FAN16G2540' => 'fan', 'FAN16G3077' => 'fan', 'FAN16G3624' => 'fan', 'FAN17G0221' => 'fan', 'FAN20G2492' => 'fan', 'FAN20G2905' => 'fan', 'FAN21G0548' => 'fan', 'FAN21G1300' => 'fan', 'FAN22G0077' => 'fan', 'FAN22G1315' => 'fan', 'FAN24G1280' => 'fan', 'FAN24G1445' => 'fan', 'FAN24G3527' => 'fan', 'FAN25G0464' => 'fan', 'FAN25G2885' => 'fan', 'FAN25G3270' => 'fan', 'FAN27G1101' => 'fan', 'FAN27G2846' => 'fan', 'FAN27G3524' => 'fan', 'FvH4_2g11770' => 'fve', 'FvH4_2g15630' => 'fve', 'FvH4_3g05570' => 'fve', 'FvH4_3g09110' => 'fve', 'FvH4_3g19940' => 'fve', 'FvH4_4g04821' => 'fve', 'FvH4_4g31480' => 'fve', 'FvH4_7g01740' => 'fve', 'Glyma.05G130400' => 'gma', 'Glyma.05G156400' => 'gma', 'Glyma.07G197000' => 'gma', 'Glyma.08G085151' => 'gma', 'Glyma.08G114500' => 'gma', 'Glyma.08G300400' => 'gma', 'Glyma.10G215800' => 'gma', 'Glyma.12G224400' => 'gma', 'Glyma.13G179300' => 'gma', 'Glyma.13G218151' => 'gma', 'Glyma.13G238800' => 'gma', 'Glyma.13G276900' => 'gma', 'Glyma.14G078200' => 'gma', 'Glyma.15G074500' => 'gma', 'Glyma.15G094100' => 'gma', 'Glyma.17G247200' => 'gma', 'Glyma.18G120100' => 'gma', 'Glyma.20G176000' => 'gma', 'Gohir.A01G063600' => 'ghi', 'Gohir.A01G170301' => 'ghi', 'Gohir.A02G060500' => 'ghi', 'Gohir.A05G133850' => 'ghi', 'Gohir.A05G161400' => 'ghi', 'Gohir.A06G012900' => 'ghi', 'Gohir.A06G035901' => 'ghi', 'Gohir.A06G127100' => 'ghi', 'Gohir.A06G210500' => 'ghi', 'Gohir.A08G008650' => 'ghi', 'Gohir.A09G072700' => 'ghi', 'Gohir.A09G088301' => 'ghi', 'Gohir.A10G040600' => 'ghi', 'Gohir.A12G036300' => 'ghi', 'Gohir.A12G143350' => 'ghi', 'Gohir.A12G165500' => 'ghi', 'Gohir.A13G145700' => 'ghi', 'Gohir.D01G050000' => 'ghi', 'Gohir.D01G051366' => 'ghi', 'Gohir.D01G161350' => 'ghi', 'Gohir.D02G065900' => 'ghi', 'Gohir.D05G164200' => 'ghi', 'Gohir.D05G355500' => 'ghi', 'Gohir.D06G010400' => 'ghi', 'Gohir.D06G111250' => 'ghi', 'Gohir.D06G132000' => 'ghi', 'Gohir.D06G210500' => 'ghi', 'Gohir.D07G165675' => 'ghi', 'Gohir.D08G062240' => 'ghi', 'Gohir.D08G086101' => 'ghi', 'Gohir.D08G138060' => 'ghi', 'Gohir.D09G072300' => 'ghi', 'Gohir.D10G041400' => 'ghi', 'Gohir.D11G191020' => 'ghi', 'Gohir.D11G212066' => 'ghi', 'Gohir.D12G036300' => 'ghi', 'Gohir.D12G168600' => 'ghi', 'Gohir.D13G150600' => 'ghi', 'Gorai.001G057300' => 'gra', 'Gorai.002G069900' => 'gra', 'Gorai.002G200000' => 'gra', 'Gorai.003G067600' => 'gra', 'Gorai.005G074800' => 'gra', 'Gorai.006G087300' => 'gra', 'Gorai.008G037500' => 'gra', 'Gorai.008G181400' => 'gra', 'Gorai.009G169400' => 'gra', 'Gorai.009G387900' => 'gra', 'Gorai.010G013300' => 'gra', 'Gorai.010G153800' => 'gra', 'Gorai.010G255800' => 'gra', 'Gorai.011G043700' => 'gra', 'Gorai.011G198900' => 'gra', 'Gorai.013G168400' => 'gra', 'GSVIVG01005212001' => 'vvi', 'GSVIVG01006163001' => 'vvi', 'GSVIVG01009625001' => 'vvi', 'GSVIVG01014338001' => 'vvi', 'GSVIVG01020005001' => 'vvi', 'GSVIVG01021450001' => 'vvi', 'GSVIVG01023975001' => 'vvi', 'GSVIVG01034490001' => 'vvi', 'HanXRQChr04g0112071' => 'han', 'HanXRQChr05g0131151' => 'han', 'HanXRQChr09g0262371' => 'han', 'HanXRQChr09g0268401' => 'han', 'HanXRQChr10g0279241' => 'han', 'HanXRQChr10g0297961' => 'han', 'HanXRQChr11g0326231' => 'han', 'HanXRQChr11g0328471' => 'han', 'HanXRQChr16g0507941' => 'han', 'HanXRQChr17g0560211' => 'han', 'Haze_02108' => 'cav', 'Haze_02428' => 'cav', 'Haze_05593' => 'cav', 'Haze_06448' => 'cav', 'Haze_09427' => 'cav', 'Haze_12022' => 'cav', 'Haze_17612' => 'cav', 'Haze_17928' => 'cav', 'Hma1.2p1_0032F.1_g019250' => 'hma', 'Hma1.2p1_0163F.1_g072690' => 'hma', 'Hma1.2p1_0265F.1_g106710' => 'hma', 'Hma1.2p1_0286F.1_g113970' => 'hma', 'Hma1.2p1_0363F.1_g136640' => 'hma', 'Hma1.2p1_0584F.1_g183470' => 'hma', 'Hma1.2p1_0885F.1_g232570' => 'hma', 'HPP92_006022' => 'vpl', 'HPP92_007320' => 'vpl', 'HPP92_011521' => 'vpl', 'HPP92_019387' => 'vpl', 'HPP92_024038' => 'vpl', 'Hund05891' => 'sun', 'Hund06450' => 'sun', 'Hund12053' => 'sun', 'Hund16800' => 'sun', 'Hund21222' => 'sun', 'Hund22896' => 'sun', 'Hund23746' => 'sun', 'Hund27083' => 'sun', 'Lalb_Chr02g0141831' => 'lal', 'Lalb_Chr02g0141841' => 'lal', 'Lalb_Chr05g0220411' => 'lal', 'Lalb_Chr06g0162081' => 'lal', 'Lalb_Chr09g0327651' => 'lal', 'Lalb_Chr13g0295051' => 'lal', 'Lalb_Chr15g0086801' => 'lal', 'Lalb_Chr16g0383781' => 'lal', 'Lalb_Chr16g0383791' => 'lal', 'Lalb_Chr18g0055441' => 'lal', 'Lalb_Chr18g0059611' => 'lal', 'Lalb_Chr20g0109661' => 'lal', 'Lalb_Chr20g0109831' => 'lal', 'Lalb_Chr20g0121871' => 'lal', 'Lalb_Chr22g0355361' => 'lal', 'Lalb_Chr25g0286371' => 'lal', 'Lj1A1187G43' => 'lonja', 'Lj1A1205T50' => 'lonja', 'Lj1A800G33' => 'lonja', 'Lj1C1187T7' => 'lonja', 'Lj1C843T11' => 'lonja', 'Lj1g0010940' => 'lja', 'Lj2A288T69' => 'lonja', 'Lj3g0024276' => 'lja', 'Lj4A47T76' => 'lonja', 'Lj4g0005805' => 'lja', 'Lj4g0006097' => 'lja', 'Lj4g0008528' => 'lja', 'Lj4g0024907' => 'lja', 'Lj5g0012472' => 'lja', 'Lj5g0018648' => 'lja', 'Lj6C789G1' => 'lonja', 'Lj6g0004000' => 'lja', 'Lj7A292G67' => 'lonja', 'Lj7A292T64' => 'lonja', 'Lj9A400T58' => 'lonja', 'Lsat_1_v5_gn_1_126181' => 'lsa', 'Lsat_1_v5_gn_4_123041' => 'lsa', 'Lsat_1_v5_gn_4_133620' => 'lsa', 'Lsat_1_v5_gn_4_53221' => 'lsa', 'Lsat_1_v5_gn_4_71961' => 'lsa', 'Lsat_1_v5_gn_7_105241' => 'lsa', 'Lsat_1_v5_gn_7_21361' => 'lsa', 'Lsat_1_v5_gn_7_28860' => 'lsa', 'Lsat_1_v5_gn_7_31260' => 'lsa', 'Lsat_1_v5_gn_8_52801' => 'lsa', 'Manes.02G191400' => 'mes', 'Manes.03G110100' => 'mes', 'Manes.04G071100' => 'mes', 'Manes.05G100500' => 'mes', 'Manes.05G164700' => 'mes', 'Manes.15G087000' => 'mes', 'Manes.15G121500' => 'mes', 'Manes.16G028300' => 'mes', 'Manes.17G046100' => 'mes', 'Manes.17G069800' => 'mes', 'Manes.18G100500' => 'mes', 'Mapoly0002s0109' => 'mpo', 'Mapoly0024s0007' => 'mpo', 'Mapoly0089s0032' => 'mpo', 'MBI04_g42241_MAGBIO' => 'mbi', 'MBI05_g11988_MAGBIO' => 'mbi', 'MBI05_g35452_MAGBIO' => 'mbi', 'MBI07_g30179_MAGBIO' => 'mbi', 'MBI07_g35859_MAGBIO' => 'mbi', 'MBI07_g35860_MAGBIO' => 'mbi', 'MBI07_g37166_MAGBIO' => 'mbi', 'MBI08_g18172_MAGBIO' => 'mbi', 'MBI09_g08441_MAGBIO' => 'mbi', 'MBI13_g01676_MAGBIO' => 'mbi', 'MBI14_g42955_MAGBIO' => 'mbi', 'MBI16_g13161_MAGBIO' => 'mbi', 'MBI17_g27204_MAGBIO' => 'mbi', 'MBI19_g21595_MAGBIO' => 'mbi', 'MD00G1148400' => 'mdo', 'MD02G1301200' => 'mdo', 'MD03G1227800' => 'mdo', 'MD05G1041100' => 'mdo', 'MD05G1124800' => 'mdo', 'MD05G1284000' => 'mdo', 'MD05G1338800' => 'mdo', 'MD05G1338900' => 'mdo', 'MD07G1022800' => 'mdo', 'MD10G1047500' => 'mdo', 'MD10G1127500' => 'mdo', 'MD10G1262300' => 'mdo', 'MD10G1293800' => 'mdo', 'MD16G1074300' => 'mdo', 'Medtr1g021670' => 'mtr', 'Medtr1g096320' => 'mtr', 'Medtr2g013690' => 'mtr', 'Medtr2g019450' => 'mtr', 'Medtr2g085170' => 'mtr', 'Medtr4g088785' => 'mtr', 'Medtr8g055930' => 'mtr', 'Medtr8g085850' => 'mtr', 'MELO3C002605.2' => 'cme', 'MELO3C003891.2' => 'cme', 'MELO3C004012.2' => 'cme', 'MELO3C007134.2' => 'cme', 'MELO3C008118.2' => 'cme', 'MELO3C016700.2' => 'cme', 'MELO3C024127.2' => 'cme', 'MELO3C033361.2' => 'cme', 'MELO3C033362.2' => 'cme', 'Migut.C00430' => 'egut', 'Migut.C01246' => 'egut', 'Migut.E00101' => 'egut', 'Migut.H01486' => 'egut', 'Migut.H01939' => 'egut', 'Migut.K00360' => 'egut', 'Migut.M00910' => 'egut', 'Migut.M01139' => 'egut', 'Migut.N02677' => 'egut', 'MSTRG.13252' => 'ama', 'MSTRG.14701' => 'ama', 'MSTRG.1521' => 'ama', 'MSTRG.15884' => 'ama', 'MSTRG.16242' => 'ama', 'MSTRG.22285' => 'ama', 'MSTRG.22444' => 'ama', 'MSTRG.2349' => 'ama', 'MSTRG.26308' => 'ama', 'MSTRG.28296' => 'ama', 'MSTRG.9895' => 'ama', 'Nitab4.5_0000110g0060' => 'nta', 'Nitab4.5_0000420g0130' => 'nta', 'Nitab4.5_0000422g0030' => 'nta', 'Nitab4.5_0000560g0180' => 'nta', 'Nitab4.5_0000703g0100' => 'nta', 'Nitab4.5_0000786g0200' => 'nta', 'Nitab4.5_0001336g0020' => 'nta', 'Nitab4.5_0001796g0030' => 'nta', 'Nitab4.5_0003348g0060' => 'nta', 'Nitab4.5_0003698g0040' => 'nta', 'Nitab4.5_0003942g0090' => 'nta', 'Nitab4.5_0004775g0070' => 'nta', 'Nitab4.5_0004864g0030' => 'nta', 'Nitab4.5_0005615g0020' => 'nta', 'Nitab4.5_0009288g0030' => 'nta', 'Nitab4.5_0009341g0010' => 'nta', 'Nitab4.5_0009535g0010' => 'nta', 'Nn1g03995' => 'nnu', 'Nn1g04100' => 'nnu', 'Nn1g06530' => 'nnu', 'Nn3g16404' => 'nnu', 'Nn3g17212' => 'nnu', 'Nn3g20776' => 'nnu', 'Nn3g21923' => 'nnu', 'Nn5g27737' => 'nnu', 'Nn5g29461' => 'nnu', 'Nn7g38355' => 'nnu', 'Nn8g39873' => 'nnu', 'Oeu000548.2' => 'oeu', 'Oeu004672.1' => 'oeu', 'Oeu015605.2' => 'oeu', 'Oeu016092.1' => 'oeu', 'Oeu017879.3' => 'oeu', 'Oeu024910.1' => 'oeu', 'Oeu028965.1' => 'oeu', 'Oeu031269.1' => 'oeu', 'Oeu031270.1' => 'oeu', 'Oeu032535.1' => 'oeu', 'Oeu034151.1' => 'oeu', 'Oeu034152.1' => 'oeu', 'Oeu034588.2' => 'oeu', 'Oeu050846.1' => 'oeu', 'Oeu050849.2' => 'oeu', 'Oeu051063.2' => 'oeu', 'Oeu052368.1' => 'oeu', 'Oeu052370.1' => 'oeu', 'Os01g0210400' => 'osa', 'Os01g0304300' => 'osa', 'Os01g0749100' => 'osa', 'Os02g0745800' => 'osa', 'Os03g0769050' => 'osa', 'Os05g0531500' => 'osa', 'Os06g0724300' => 'osa', 'Os11g0198100' => 'osa', 'Peaxi162Scf00069g01425' => 'pax', 'Peaxi162Scf00280g00811' => 'pax', 'Peaxi162Scf00310g00615' => 'pax', 'Peaxi162Scf00362g00542' => 'pax', 'Peaxi162Scf00461g00310' => 'pax', 'Peaxi162Scf00530g00118' => 'pax', 'Peaxi162Scf00541g00057' => 'pax', 'Peaxi162Scf00661g00017' => 'pax', 'Peaxi162Scf00926g00027' => 'pax', 'Peaxi162Scf01064g00263' => 'pax', 'Peaxi162Scf01211g00135' => 'pax', 'PGR004G2336' => 'pgr', 'PGR042G0327' => 'pgr', 'PGR042G1957' => 'pgr', 'PGR042G2003' => 'pgr', 'PGR042G3929' => 'pgr', 'PGR083G1137' => 'pgr', 'PGR083G1364' => 'pgr', 'PGSC0003DMG400003381' => 'stu', 'PGSC0003DMG400003417' => 'stu', 'PGSC0003DMG400008981' => 'stu', 'PGSC0003DMG400012417' => 'stu', 'PGSC0003DMG400012823' => 'stu', 'PGSC0003DMG400016885' => 'stu', 'PGSC0003DMG400022812' => 'stu', 'PGSC0003DMG400029726' => 'stu', 'PGSC0003DMG401009243' => 'stu', 'PGSC0003DMG401031505' => 'stu', 'PGSC0003DMG402031505' => 'stu', 'Phvul.001G017600' => 'pvu', 'Phvul.002G193500' => 'pvu', 'Phvul.002G228900' => 'pvu', 'Phvul.002G236800' => 'pvu', 'Phvul.003G049500' => 'pvu', 'Phvul.005G072000' => 'pvu', 'Phvul.006G164800' => 'pvu', 'Phvul.006G185100' => 'pvu', 'Phvul.007G090000' => 'pvu', 'Potri.001G399800' => 'ptr', 'Potri.002G149900' => 'ptr', 'Potri.004G044100' => 'ptr', 'Potri.004G177600' => 'ptr', 'Potri.009G138000' => 'ptr', 'Potri.010G094000' => 'ptr', 'Potri.011G053000' => 'ptr', 'Potri.011G119300' => 'ptr', 'Potri.013G113700' => 'ptr', 'Potri.018G107800' => 'ptr', 'Potri.019G084100' => 'ptr', 'Pp3c14_23720' => 'ppa', 'Pp3c16_6340' => 'ppa', 'Pp3c23_13420' => 'ppa', 'Pp3c24_2740' => 'ppa', 'Pp3c25_860' => 'ppa', 'Pp3c8_21750' => 'ppa', 'Prupe.1G273000' => 'ppe', 'Prupe.1G273700' => 'ppe', 'Prupe.1G274100' => 'ppe', 'Prupe.2G023300' => 'ppe', 'Prupe.4G048000' => 'ppe', 'Prupe.4G080400' => 'ppe', 'Prupe.4G181200' => 'ppe', 'Prupe.8G056900' => 'ppe', 'Prupe.8G168700' => 'ppe', 'Psat1g189080' => 'psa', 'Psat1g204760' => 'psa', 'Psat4g175560' => 'psa', 'Psat4g177720' => 'psa', 'Psat5g244240' => 'psa', 'Psat6g010720' => 'psa', 'Psat6g187200' => 'psa', 'Psat7g072040' => 'psa', 'PSO017G3501' => 'pso', 'PSO063G2148' => 'pso', 'PSO063G5608' => 'pso', 'PSO210G6392' => 'pso', 'PSO541G2319' => 'pso', 'PSO541G2836' => 'pso', 'PSO541G4012' => 'pso', 'PSO541G6253' => 'pso', 'PSO675G0580' => 'pso', 'PSO675G0856' => 'pso', 'PSO675G5635' => 'pso', 'PSO675G9157' => 'pso', 'PSO832G1660' => 'pso', 'PSO832G1969' => 'pso', 'QL02p007186' => 'qlo', 'QL02p033904' => 'qlo', 'QL03p064391' => 'qlo', 'QL05p040593' => 'qlo', 'QL05p058242' => 'qlo', 'QL08p021825' => 'qlo', 'QL11p004981' => 'qlo', 'RcHm_v2.0_Chr1g0318301' => 'rch', 'RcHm_v2.0_Chr4g0418501' => 'rch', 'RcHm_v2.0_Chr4g0439971' => 'rch', 'RcHm_v2.0_Chr5g0008541' => 'rch', 'RcHm_v2.0_Chr5g0014101' => 'rch', 'RcHm_v2.0_Chr5g0014131' => 'rch', 'RcHm_v2.0_Chr5g0033621' => 'rch', 'RcHm_v2.0_Chr6g0272041' => 'rch', 'RcHm_v2.0_Chr6g0278831' => 'rch', 'Rhsim02G0130400' => 'rsi', 'Rhsim02G0171100' => 'rsi', 'Rhsim05G0053000' => 'rsi', 'Rhsim05G0053100' => 'rsi', 'Rhsim06G0096500' => 'rsi', 'Rhsim06G0096600' => 'rsi', 'Rhsim06G0199100' => 'rsi', 'Rhsim12G0062300' => 'rsi', 'Rhsim12G0062800' => 'rsi', 'Sabra02G0118600' => 'sbr', 'Sabra04G0027300' => 'sbr', 'Sabra04G0119500' => 'sbr', 'Sabra08G0112500' => 'sbr', 'Sabra11G0036800' => 'sbr', 'Sabra11G0103800' => 'sbr', 'Sabra13G0096300' => 'sbr', 'Sabra16G0262300' => 'sbr', 'Sabra18G0091700' => 'sbr', 'Sabra19G0095400' => 'sbr', 'SalBow6G3080' => 'sbo', 'SalBow7G1157' => 'sbo', 'SalBow7G2123' => 'sbo', 'SalBow7G2285' => 'sbo', 'SalBow7G3537' => 'sbo', 'SalBow8G2947' => 'sbo', 'SalBow8G4463' => 'sbo', 'SalBow8G5466' => 'sbo', 'Sc01g0001750' => 'sci', 'Sc02g0006640' => 'sci', 'Sc02g0006670' => 'sci', 'Sc04g0008220' => 'sci', 'Sc05g0006190' => 'sci', 'Sc08g0002760' => 'sci', 'Sc17g0006170' => 'sci', 'Sc22g0002050' => 'sci', 'Sc23g0001190' => 'sci', 'Sc24g0000980' => 'sci', 'Sed0006245' => 'sed', 'Sed0007543' => 'sed', 'Sed0009411' => 'sed', 'Sed0010765' => 'sed', 'Sed0012944' => 'sed', 'Sed0014682' => 'sed', 'Sed0016174' => 'sed', 'Sed0016796' => 'sed', 'Sed0020317' => 'sed', 'Sed0021467' => 'sed', 'SEGI_01316' => 'sgi', 'SEGI_03374' => 'sgi', 'SEGI_16265' => 'sgi', 'SEGI_18569' => 'sgi', 'SEGI_20351' => 'sgi', 'SEGI_26395' => 'sgi', 'SEGI_29469' => 'sgi', 'SEGI_34771' => 'sgi', 'SEGI_36769' => 'sgi', 'SEGI_37139' => 'sgi', 'SGA_v2.0_scaffold100G29687' => 'sas', 'SGA_v2.0_scaffold118G32472' => 'sas', 'SGA_v2.0_scaffold14G07051' => 'sas', 'SGA_v2.0_scaffold183G39845' => 'sas', 'SGA_v2.0_scaffold1G00174' => 'sas', 'SGA_v2.0_scaffold22G09714' => 'sas', 'SGA_v2.0_scaffold333G48992' => 'sas', 'SGA_v2.0_scaffold46G17491' => 'sas', 'SGA_v2.0_scaffold49G18294' => 'sas', 'SGA_v2.0_scaffold63G21658' => 'sas', 'SHI01741' => 'shi', 'SHI05771' => 'shi', 'SHI18077' => 'shi', 'SHI20525' => 'shi', 'SHI20527' => 'shi', 'SHI20528' => 'shi', 'SMO172G0185' => 'smo', 'SMO198G0020' => 'smo', 'SMO351G0006' => 'smo', 'SMO356G0118' => 'smo', 'SMO358G0296' => 'smo', 'SMO367G0079' => 'smo', 'SMO367G1277' => 'smo', 'Solyc01g014220.3' => 'sly', 'Solyc01g111770.2' => 'sly', 'Solyc02g078180.3' => 'sly', 'Solyc03g006430.3' => 'sly', 'Solyc03g006456.1' => 'sly', 'Solyc03g079860.2' => 'sly', 'Solyc04g079770.3' => 'sly', 'Solyc05g007430.4' => 'sly', 'Solyc07g063150.3' => 'sly', 'Solyc08g016620.3' => 'sly', 'Solyc09g057590.3' => 'sly', 'Solyc09g057600.1' => 'sly', 'Solyc10g009050.3' => 'sly', 'Solyc11g017420.2' => 'sly', 'Sopen01g053810' => 'spe', 'Sopen02g023040' => 'spe', 'Sopen03g002440' => 'spe', 'Sopen04g033350' => 'spe', 'Sopen05g003310' => 'spe', 'Sopen07g004050' => 'spe', 'Sopen07g031340' => 'spe', 'Sopen08g006990' => 'spe', 'Sopen10g004830' => 'spe', 'Sopen11g009370' => 'spe', 'Sp1g24450' => 'spa', 'Sp1g29670' => 'spa', 'Sp1g39600' => 'spa', 'Sp2g11080' => 'spa', 'Sp2g13970' => 'spa', 'Sp4g16130' => 'spa', 'Sp6g13080' => 'spa', 'Sp7g37270' => 'spa', 'TAR371G0065' => 'tar', 'TAR376G0340' => 'tar', 'TAR376G0435' => 'tar', 'TAR381G0002' => 'tar', 'TAR381G1236' => 'tar', 'TAR624G0055' => 'tar', 'TAR624G0324' => 'tar', 'TAR624G0696' => 'tar', 'TAR624G0906' => 'tar', 'TAR625G0107' => 'tar', 'TAR626G0015' => 'tar', 'TAR626G1356' => 'tar', 'TAR627G0888' => 'tar', 'TAR628G0399' => 'tar', 'TAR628G1327' => 'tar', 'TAR629G2831' => 'tar', 'TAR629G2874' => 'tar', 'TAR633G1432' => 'tar', 'TAR633G2771' => 'tar', 'THA.LOC104803394' => 'tha', 'THA.LOC104805153' => 'tha', 'THA.LOC104806784' => 'tha', 'THA.LOC104810473' => 'tha', 'THA.LOC104813100' => 'tha', 'THA.LOC104814215' => 'tha', 'THA.LOC104815554' => 'tha', 'THA.LOC104820544' => 'tha', 'THA.LOC104824754' => 'tha', 'THA.LOC104827717' => 'tha', 'Thecc.02G031400' => 'tca', 'Thecc.02G055900' => 'tca', 'Thecc.02G350800' => 'tca', 'Thecc.06G150900' => 'tca', 'Thecc.06G186600' => 'tca', 'Thecc.07G089600' => 'tca', 'Thecc.08G020400' => 'tca', 'Thecc.08G182100' => 'tca', 'Thhalv10000873m.g' => 'esa', 'Thhalv10004185m.g' => 'esa', 'Thhalv10006981m.g' => 'esa', 'Thhalv10007204m.g' => 'esa', 'Thhalv10011374m.g' => 'esa', 'Thhalv10013482m.g' => 'esa', 'Thhalv10017801m.g' => 'esa', 'Thhalv10024983m.g' => 'esa', 'TPR.G12072' => 'tpr', 'TPR.G15769' => 'tpr', 'TPR.G16504' => 'tpr', 'TPR.G16506' => 'tpr', 'TPR.G24345' => 'tpr', 'TPR.G26666' => 'tpr', 'TPR.G27320' => 'tpr', 'TPR.G31819' => 'tpr', 'TPR.G38879' => 'tpr', 'TPR.G39015' => 'tpr', 'TPR.G8819' => 'tpr', 'TWI09G0924' => 'twi', 'TWI12G0811' => 'twi', 'TWI12G1294' => 'twi', 'TWI31G0150' => 'twi', 'TWI36G1262' => 'twi', 'TWI38G1287' => 'twi', 'TWI38G1633' => 'twi', 'TWI38G1982' => 'twi', 'TWI39G0116' => 'twi', 'TWI60G1011' => 'twi', 'TWI63G0171' => 'twi', 'TWI73G0839' => 'twi', 'TWI79G1511' => 'twi', 'unitig_0.g915' => 'ugi', 'unitig_0.g916' => 'ugi', 'unitig_21.g20219' => 'ugi', 'unitig_21.g20416' => 'ugi', 'unitig_578.g16132' => 'ugi', 'unitig_578.g16718' => 'ugi', 'unitig_62.g23481' => 'ugi', 'unitig_744.g24535' => 'ugi', 'unitig_749.g13525' => 'ugi', 'vmacro01248' => 'vma', 'vmacro02290' => 'vma', 'vmacro10946' => 'vma', 'vmacro11865' => 'vma', 'vmacro12493' => 'vma', 'vmacro17322' => 'vma', 'vmacro21599' => 'vma', 'vmacro23041' => 'vma', 'VMungo0251G0004' => 'vmu', 'VMungo0251G2639' => 'vmu', 'VMungo0251G2967' => 'vmu', 'VMungo0540G0864' => 'vmu', 'VMungo0540G1569' => 'vmu', 'VMungo0647G0317' => 'vmu', 'VMungo0720G1373' => 'vmu', 'VMungo0720G1508' => 'vmu', 'VMungo1080G0485' => 'vmu', 'VMungo1215G3177' => 'vmu', 'Zm00001eb112600' => 'zma', 'Zm00001eb120220' => 'zma', 'Zm00001eb153240' => 'zma', 'Zm00001eb168880' => 'zma', 'Zm00001eb213920' => 'zma', 'Zm00001eb228280' => 'zma', 'Zm00001eb254580' => 'zma', 'Zm00001eb272180' => 'zma', 'Zm00001eb293190' => 'zma', 'Zm00001eb322930' => 'zma', 'Zm00001eb353360' => 'zma', 'Zm00001eb353390' => 'zma', 'Zm00001eb353430' => 'zma', 'Zm00001eb353440' => 'zma', 'Zm00001eb353780' => 'zma' ) $gf_id = 'HOM05D000499' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000499' ) $data_identifier = 'HOM05D000499' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 29, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 12, 'amhyb' => (int) 8, 'aly' => (int) 12, 'aox' => (int) 9, 'arhy' => (int) 26, 'ath' => (int) 8, 'atr' => (int) 7, 'acertr' => (int) 10, 'cqu' => (int) 15, 'bca' => (int) 29, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 11, 'cansat' => (int) 8, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 9, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 8, 'cpa' => (int) 10, 'csa' => (int) 7, 'camsi' => (int) 20, 'dca' => (int) 8, 'din' => (int) 12, 'dzi' => (int) 14, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 6, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 38, 'gra' => (int) 16, 'vvi' => (int) 8, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 5, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 11, 'lja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 11, 'mpo' => (int) 3, 'mbi' => (int) 14, 'mdo' => (int) 14, 'mtr' => (int) 8, 'cme' => (int) 9, 'egut' => (int) 9, 'ama' => (int) 11, 'nta' => (int) 17, 'nnu' => (int) 11, 'oeu' => (int) 18, 'osa' => (int) 8, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 6, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 9, 'rsi' => (int) 9, 'sbr' => (int) 10, 'sbo' => (int) 8, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 10, 'sas' => (int) 10, 'shi' => (int) 6, 'smo' => (int) 7, 'sly' => (int) 14, 'spe' => (int) 10, 'spa' => (int) 8, 'tar' => (int) 19, 'tha' => (int) 10, 'tca' => (int) 8, 'esa' => (int) 8, 'tpr' => (int) 11, 'twi' => (int) 13, 'ugi' => (int) 9, 'vma' => (int) 8, 'vmu' => (int) 10, 'zma' => (int) 15 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb353780' $species_info = array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ) $local_species = 'osa' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000499', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1066', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p29780' => 'bna', 'A02p33180' => 'bna', 'A03p16470' => 'bna', 'A03p66010' => 'bna', 'A04p25970' => 'bna', 'A06p01270' => 'bna', 'A06p46080' => 'bna', 'A07p11400' => 'bna', 'A08p01840' => 'bna', 'A08p08230' => 'bna', 'A08p25740' => 'bna', 'A09p32070' => 'bna', 'A09p37830' => 'bna', 'A09p42840' => 'bna', 'A09p42850' => 'bna', 'Aa31LG10G2060' => 'aar', 'Aa31LG2G7410' => 'aar', 'Aa31LG6G10200' => 'aar', 'Aa31LG6G16680' => 'aar', 'Aa31LG6G8470' => 'aar', 'Aa31LG9G12730' => 'aar', 'Aa31LG9G13680' => 'aar', 'Aa31LG9G14920' => 'aar', 'Aa31LG9G6650' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4977' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5467' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3254' => 'aag', 'Actinidia02578' => 'ach', 'Actinidia07693' => 'ach', 'Actinidia08413' => 'ach', 'Actinidia08414' => 'ach', 'Actinidia15289' => 'ach', 'Actinidia19871' => 'ach', 'Actinidia21475' => 'ach', 'Actinidia22576' => 'ach', 'Actinidia28327' => 'ach', 'Actinidia32491' => 'ach', 'Actinidia39463' => 'ach', 'Actinidia39571' => 'ach', 'Ah.01g013750' => 'amhyb', 'Ah.01g023210' => 'amhyb', 'Ah.04g164850' => 'amhyb', 'Ah.05g178060' => 'amhyb', 'Ah.07g204270' => 'amhyb', 'Ah.07g208480' => 'amhyb', 'Ah.09g237410' => 'amhyb', 'Ah.14g089460' => 'amhyb', 'AL1G41790' => 'aly', 'AL1G49050' => 'aly', 'AL1G53810' => 'aly', 'AL1G61400' => 'aly', 'AL4G18580' => 'aly', 'AL5G12510' => 'aly', 'AL5G12540' => 'aly', 'AL6G43230' => 'aly', 'AL7G10370' => 'aly', 'AL7G19250' => 'aly', 'AL8G12240' => 'aly', 'AL8G18540' => 'aly', 'Aqoxy1G02409' => 'aox', 'Aqoxy2G03993' => 'aox', 'Aqoxy3G03357' => 'aox', 'Aqoxy4G00785' => 'aox', 'Aqoxy5G02598' => 'aox', 'Aqoxy6G00132' => 'aox', 'Aqoxy7G01776' => 'aox', 'Aqoxy7G02316' => 'aox', 'Aqoxy7G03973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.12AFKW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B8730' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27IQR1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3F75VG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3RE0GA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41TCQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.527VTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FIR39' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5W8UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DA38EV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ63HS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H1I32C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HC27T5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4M8AP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7N3CZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9UVDZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LS1NQA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT1D4B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SKC4TM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCFV76' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF9Q1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQWD9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1ZM88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WE07RT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YCK7VH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJE6Q6' => 'arhy', 'AT1G28240' => 'ath', 'AT1G34550' => 'ath', 'AT1G53040' => 'ath', 'AT2G02910' => 'ath', 'AT4G09630' => 'ath', 'AT4G38500' => 'ath', 'AT5G42660' => 'ath', 'AT5G46220' => 'ath', 'ATR0152G026' => 'atr', 'ATR0564G343' => 'atr', 'ATR0706G151' => 'atr', 'ATR0733G207' => 'atr', 'ATR0751G234' => 'atr', 'ATR0807G048' => 'atr', 'ATR1091G084' => 'atr', 'Atru.chr10.1229' => 'acertr', 'Atru.chr10.1230' => 'acertr', 'Atru.chr10.1874' => 'acertr', 'Atru.chr11.1808' => 'acertr', 'Atru.chr13.1795' => 'acertr', 'Atru.chr13.570' => 'acertr', 'Atru.chr2.2608' => 'acertr', 'Atru.chr2.2609' => 'acertr', 'Atru.chr5.3428' => 'acertr', 'Atru.chr8.1171' => 'acertr', 'AUR62004651' => 'cqu', 'AUR62008675' => 'cqu', 'AUR62010014' => 'cqu', 'AUR62013004' => 'cqu', 'AUR62014825' => 'cqu', 'AUR62015015' => 'cqu', 'AUR62015151' => 'cqu', 'AUR62017020' => 'cqu', 'AUR62019422' => 'cqu', 'AUR62023570' => 'cqu', 'AUR62025571' => 'cqu', 'AUR62029098' => 'cqu', 'AUR62033863' => 'cqu', 'AUR62034296' => 'cqu', 'AUR62040075' => 'cqu', 'BcaB02g07334' => 'bca', 'BcaB02g10575' => 'bca', 'BcaB03g12119' => 'bca', 'BcaB03g12120' => 'bca', 'BcaB03g13945' => 'bca', 'BcaB04g17123' => 'bca', 'BcaB04g17867' => 'bca', 'BcaB04g19839' => 'bca', 'BcaB07g30317' => 'bca', 'BcaB07g32432' => 'bca', 'BcaB07g33362' => 'bca', 'BcaB08g36611' => 'bca', 'BcaC01g00028' => 'bca', 'BcaC01g01356' => 'bca', 'BcaC01g02034' => 'bca', 'BcaC01g06051' => 'bca', 'BcaC03g16839' => 'bca', 'BcaC03g17176' => 'bca', 'BcaC05g26829' => 'bca', 'BcaC06g31490' => 'bca', 'BcaC06g35344' => 'bca', 'BcaC06g36570' => 'bca', 'BcaC07g37537' => 'bca', 'BcaC08g43491' => 'bca', 'BcaC08g43773' => 'bca', 'BcaNung00234' => 'bca', 'BcaNung01982' => 'bca', 'BcaNung03707' => 'bca', 'BcaNung06454' => 'bca', 'BolC2t10762H' => 'bol', 'BolC2t11191H' => 'bol', 'BolC3t14322H' => 'bol', 'BolC3t19747H' => 'bol', 'BolC3t21425H' => 'bol', 'BolC4t27800H' => 'bol', 'BolC5t31423H' => 'bol', 'BolC6t35951H' => 'bol', 'BolC6t36282H' => 'bol', 'BolC7t40678H' => 'bol', 'BolC7t40679H' => 'bol', 'BolC7t42222H' => 'bol', 'BolC7t43492H' => 'bol', 'BolC7t46785H' => 'bol', 'BolC8t47853H' => 'bol', 'BolC9t56805H' => 'bol', 'BraA02t08000Z' => 'bra', 'BraA02t08341Z' => 'bra', 'BraA03t10936Z' => 'bra', 'BraA03t15657Z' => 'bra', 'BraA04t18100Z' => 'bra', 'BraA05t20523Z' => 'bra', 'BraA06t23353Z' => 'bra', 'BraA06t27473Z' => 'bra', 'BraA06t27769Z' => 'bra', 'BraA07t28928Z' => 'bra', 'BraA08t32236Z' => 'bra', 'BraA08t32841Z' => 'bra', 'BraA08t34524Z' => 'bra', 'BraA09t38742Z' => 'bra', 'BraA09t39295Z' => 'bra', 'C02p47180' => 'bna', 'C02p50990' => 'bna', 'C03p19360' => 'bna', 'C03p74950' => 'bna', 'C03p91000' => 'bna', 'C04p63260' => 'bna', 'C05p27050' => 'bna', 'C06p08750' => 'bna', 'C06p11490' => 'bna', 'C07p02820' => 'bna', 'C07p17180' => 'bna', 'C07p29440' => 'bna', 'C07p63730' => 'bna', 'C09p39260' => 'bna', 'CAN.G1164.34' => 'can', 'CAN.G1164.39' => 'can', 'CAN.G1530.3' => 'can', 'CAN.G162.61' => 'can', 'CAN.G176.6' => 'can', 'CAN.G289.49' => 'can', 'CAN.G370.21' => 'can', 'CAN.G370.22' => 'can', 'CAN.G371.117' => 'can', 'CAN.G58.37' => 'can', 'CAN.G588.98' => 'can', 'CANSAT21G2266' => 'cansat', 'CANSAT25G2799' => 'cansat', 'CANSAT35G0862' => 'cansat', 'CANSAT35G1704' => 'cansat', 'CANSAT35G1760' => 'cansat', 'CANSAT56G3971' => 'cansat', 'CANSAT56G4116' => 'cansat', 'CANSAT80G1259' => 'cansat', 'CARHR027730' => 'chi', 'CARHR033880' => 'chi', 'CARHR043270' => 'chi', 'CARHR145330' => 'chi', 'CARHR145340' => 'chi', 'CARHR175570' => 'chi', 'CARHR181570' => 'chi', 'CARHR258470' => 'chi', 'CARHR260490' => 'chi', 'CARHR294220' => 'chi', 'Carub.0001s2668' => 'cru', 'Carub.0001s3257' => 'cru', 'Carub.0001s4220' => 'cru', 'Carub.0005s0179' => 'cru', 'Carub.0006s2807' => 'cru', 'Carub.0007s0039' => 'cru', 'Carub.0008s0169' => 'cru', 'Carub.0008s0636' => 'cru', 'Ca_00338_v3' => 'car', 'Ca_00542_v3' => 'car', 'Ca_01844_v3' => 'car', 'Ca_10611_v3' => 'car', 'Ca_13326_v3' => 'car', 'Ca_17944_v3' => 'car', 'Ca_18546_v3' => 'car', 'Ca_24219_v3' => 'car', 'Ca_29972_v3' => 'car', 'CBR_g3681' => 'cbr', 'CBR_g40021' => 'cbr', 'Cc01_g08140' => 'ccan', 'Cc02_g13410' => 'ccan', 'Cc02_g37480' => 'ccan', 'Cc05_g12030' => 'ccan', 'Cc09_g03370' => 'ccan', 'Cc09_g10300' => 'ccan', 'Cc10_g03530' => 'ccan', 'Cc10_g11380' => 'ccan', 'CDE01G0176' => 'cde', 'CDE02G0675' => 'cde', 'CDE02G0942' => 'cde', 'CDE02G1153' => 'cde', 'CDE02G4177' => 'cde', 'CDE04G2117' => 'cde', 'CDE04G2736' => 'cde', 'CDE08G1161' => 'cde', 'CDE09G1238' => 'cde', 'Cfa000467' => 'cfa', 'Cfa000947' => 'cfa', 'Cfa004969' => 'cfa', 'Cfa005284' => 'cfa', 'Cfa008993' => 'cfa', 'Cfa018187' => 'cfa', 'Cfa018454' => 'cfa', 'Cfa020585' => 'cfa', 'Ciclev10000424m.g' => 'ccl', 'Ciclev10003605m.g' => 'ccl', 'Ciclev10007828m.g' => 'ccl', 'Ciclev10014620m.g' => 'ccl', 'Ciclev10015169m.g' => 'ccl', 'Ciclev10018291m.g' => 'ccl', 'Ciclev10028256m.g' => 'ccl', 'Ciclev10033822m.g' => 'ccl', 'CiPaw.05G060300' => 'cil', 'CiPaw.05G085000' => 'cil', 'CiPaw.06G083700' => 'cil', 'CiPaw.06G120300' => 'cil', 'CiPaw.09G060500' => 'cil', 'CiPaw.09G123800' => 'cil', 'CiPaw.11G169700' => 'cil', 'CiPaw.12G118300' => 'cil', 'CiPaw.15G071000' => 'cil', 'CiPaw.15G081900' => 'cil', 'ClCG01G024610' => 'cla', 'ClCG03G006070' => 'cla', 'ClCG05G019250' => 'cla', 'ClCG09G009500' => 'cla', 'ClCG11G008200' => 'cla', 'ClCG11G018080' => 'cla', 'COL.COLO4_17373' => 'col', 'COL.COLO4_22994' => 'col', 'COL.COLO4_26389' => 'col', 'COL.COLO4_27170' => 'col', 'COL.COLO4_31074' => 'col', 'COL.COLO4_31465' => 'col', 'COL.COLO4_36438' => 'col', 'COL.COLO4_36439' => 'col', 'Cpa.g.c38781' => 'cpa', 'Cpa.g.sc128.12' => 'cpa', 'Cpa.g.sc166.7' => 'cpa', 'Cpa.g.sc166.8' => 'cpa', 'Cpa.g.sc20.111' => 'cpa', 'Cpa.g.sc27.31' => 'cpa', 'Cpa.g.sc64.36' => 'cpa', 'Cpa.g.sc64.37' => 'cpa', 'Cpa.g.sc66.49' => 'cpa', 'Cpa.g.sc80.64' => 'cpa', 'CsaV3_1G012320' => 'csa', 'CsaV3_2G008480' => 'csa', 'CsaV3_2G033450' => 'csa', 'CsaV3_3G044830' => 'csa', 'CsaV3_4G033710' => 'csa', 'CsaV3_6G051730' => 'csa', 'CsaV3_7G025350' => 'csa', 'CSS0001067' => 'camsi', 'CSS0005996' => 'camsi', 'CSS0006590' => 'camsi', 'CSS0009673' => 'camsi', 'CSS0010201' => 'camsi', 'CSS0010549' => 'camsi', 'CSS0011364' => 'camsi', 'CSS0014473' => 'camsi', 'CSS0014961' => 'camsi', 'CSS0020191' => 'camsi', 'CSS0021165' => 'camsi', 'CSS0022306' => 'camsi', 'CSS0030591' => 'camsi', 'CSS0030696' => 'camsi', 'CSS0032653' => 'camsi', 'CSS0037487' => 'camsi', 'CSS0041102' => 'camsi', 'CSS0041261' => 'camsi', 'CSS0046246' => 'camsi', 'CSS0049256' => 'camsi', 'DCAR_004075' => 'dca', 'DCAR_011538' => 'dca', 'DCAR_019553' => 'dca', 'DCAR_020952' => 'dca', 'DCAR_021739' => 'dca', 'DCAR_027407' => 'dca', 'DCAR_027913' => 'dca', 'DCAR_028066' => 'dca', 'Dinv05899' => 'din', 'Dinv07563' => 'din', 'Dinv08010' => 'din', 'Dinv14125' => 'din', 'Dinv20172' => 'din', 'Dinv30743' => 'din', 'Dinv31229' => 'din', 'Dinv34162' => 'din', 'Dinv36028' => 'din', 'Dinv39368' => 'din', 'Dinv40565' => 'din', 'Dinv41706' => 'din', 'Duzib052G0089' => 'dzi', 'Duzib116G0641' => 'dzi', 'Duzib132G0069' => 'dzi', 'Duzib132G1219' => 'dzi', 'Duzib147G0278' => 'dzi', 'Duzib160G0480' => 'dzi', 'Duzib170G0661' => 'dzi', 'Duzib177G0591' => 'dzi', 'Duzib187G1353' => 'dzi', 'Duzib192G0858' => 'dzi', 'Duzib192G0883' => 'dzi', 'Duzib213G0506' => 'dzi', 'Duzib235G0289' => 'dzi', 'Duzib251G0422' => 'dzi', 'ECA232G3898' => 'eca', 'ECA233G5950' => 'eca', 'ECA234G1699' => 'eca', 'ECA234G2421' => 'eca', 'ECA236G0426' => 'eca', 'ECA236G4331' => 'eca', 'ECA248G2573' => 'eca', 'EL10Ac1g00077' => 'bvu', 'EL10Ac1g01746' => 'bvu', 'EL10Ac2g03464' => 'bvu', 'EL10Ac4g08176' => 'bvu', 'EL10Ac7g17521' => 'bvu', 'EL10Ac8g20386' => 'bvu', 'EL10Ac9g21343' => 'bvu', 'EL10Ac9g22688' => 'bvu', 'Eucgr.B03434' => 'egr', 'Eucgr.D00618' => 'egr', 'Eucgr.E02395' => 'egr', 'Eucgr.F01129' => 'egr', 'Eucgr.F02622' => 'egr', 'Eucgr.F04207' => 'egr', 'FAN01G0570' => 'fan', 'FAN03G3351' => 'fan', 'FAN06G3702' => 'fan', 'FAN07G2149' => 'fan', 'FAN10G3758' => 'fan', 'FAN11G1170' => 'fan', 'FAN11G2050' => 'fan', 'FAN11G2724' => 'fan', 'FAN12G1700' => 'fan', 'FAN12G2028' => 'fan', 'FAN15G1160' => 'fan', 'FAN15G3063' => 'fan', 'FAN16G2540' => 'fan', 'FAN16G3077' => 'fan', 'FAN16G3624' => 'fan', 'FAN17G0221' => 'fan', 'FAN20G2492' => 'fan', 'FAN20G2905' => 'fan', 'FAN21G0548' => 'fan', 'FAN21G1300' => 'fan', 'FAN22G0077' => 'fan', 'FAN22G1315' => 'fan', 'FAN24G1280' => 'fan', 'FAN24G1445' => 'fan', 'FAN24G3527' => 'fan', 'FAN25G0464' => 'fan', 'FAN25G2885' => 'fan', 'FAN25G3270' => 'fan', 'FAN27G1101' => 'fan', 'FAN27G2846' => 'fan', 'FAN27G3524' => 'fan', 'FvH4_2g11770' => 'fve', 'FvH4_2g15630' => 'fve', 'FvH4_3g05570' => 'fve', 'FvH4_3g09110' => 'fve', 'FvH4_3g19940' => 'fve', 'FvH4_4g04821' => 'fve', 'FvH4_4g31480' => 'fve', 'FvH4_7g01740' => 'fve', 'Glyma.05G130400' => 'gma', 'Glyma.05G156400' => 'gma', 'Glyma.07G197000' => 'gma', 'Glyma.08G085151' => 'gma', 'Glyma.08G114500' => 'gma', 'Glyma.08G300400' => 'gma', 'Glyma.10G215800' => 'gma', 'Glyma.12G224400' => 'gma', 'Glyma.13G179300' => 'gma', 'Glyma.13G218151' => 'gma', 'Glyma.13G238800' => 'gma', 'Glyma.13G276900' => 'gma', 'Glyma.14G078200' => 'gma', 'Glyma.15G074500' => 'gma', 'Glyma.15G094100' => 'gma', 'Glyma.17G247200' => 'gma', 'Glyma.18G120100' => 'gma', 'Glyma.20G176000' => 'gma', 'Gohir.A01G063600' => 'ghi', 'Gohir.A01G170301' => 'ghi', 'Gohir.A02G060500' => 'ghi', 'Gohir.A05G133850' => 'ghi', 'Gohir.A05G161400' => 'ghi', 'Gohir.A06G012900' => 'ghi', 'Gohir.A06G035901' => 'ghi', 'Gohir.A06G127100' => 'ghi', 'Gohir.A06G210500' => 'ghi', 'Gohir.A08G008650' => 'ghi', 'Gohir.A09G072700' => 'ghi', 'Gohir.A09G088301' => 'ghi', 'Gohir.A10G040600' => 'ghi', 'Gohir.A12G036300' => 'ghi', 'Gohir.A12G143350' => 'ghi', 'Gohir.A12G165500' => 'ghi', 'Gohir.A13G145700' => 'ghi', 'Gohir.D01G050000' => 'ghi', 'Gohir.D01G051366' => 'ghi', 'Gohir.D01G161350' => 'ghi', 'Gohir.D02G065900' => 'ghi', 'Gohir.D05G164200' => 'ghi', 'Gohir.D05G355500' => 'ghi', 'Gohir.D06G010400' => 'ghi', 'Gohir.D06G111250' => 'ghi', 'Gohir.D06G132000' => 'ghi', 'Gohir.D06G210500' => 'ghi', 'Gohir.D07G165675' => 'ghi', 'Gohir.D08G062240' => 'ghi', 'Gohir.D08G086101' => 'ghi', 'Gohir.D08G138060' => 'ghi', 'Gohir.D09G072300' => 'ghi', 'Gohir.D10G041400' => 'ghi', 'Gohir.D11G191020' => 'ghi', 'Gohir.D11G212066' => 'ghi', 'Gohir.D12G036300' => 'ghi', 'Gohir.D12G168600' => 'ghi', 'Gohir.D13G150600' => 'ghi', 'Gorai.001G057300' => 'gra', 'Gorai.002G069900' => 'gra', 'Gorai.002G200000' => 'gra', 'Gorai.003G067600' => 'gra', 'Gorai.005G074800' => 'gra', 'Gorai.006G087300' => 'gra', 'Gorai.008G037500' => 'gra', 'Gorai.008G181400' => 'gra', 'Gorai.009G169400' => 'gra', 'Gorai.009G387900' => 'gra', 'Gorai.010G013300' => 'gra', 'Gorai.010G153800' => 'gra', 'Gorai.010G255800' => 'gra', 'Gorai.011G043700' => 'gra', 'Gorai.011G198900' => 'gra', 'Gorai.013G168400' => 'gra', 'GSVIVG01005212001' => 'vvi', 'GSVIVG01006163001' => 'vvi', 'GSVIVG01009625001' => 'vvi', 'GSVIVG01014338001' => 'vvi', 'GSVIVG01020005001' => 'vvi', 'GSVIVG01021450001' => 'vvi', 'GSVIVG01023975001' => 'vvi', 'GSVIVG01034490001' => 'vvi', 'HanXRQChr04g0112071' => 'han', 'HanXRQChr05g0131151' => 'han', 'HanXRQChr09g0262371' => 'han', 'HanXRQChr09g0268401' => 'han', 'HanXRQChr10g0279241' => 'han', 'HanXRQChr10g0297961' => 'han', 'HanXRQChr11g0326231' => 'han', 'HanXRQChr11g0328471' => 'han', 'HanXRQChr16g0507941' => 'han', 'HanXRQChr17g0560211' => 'han', 'Haze_02108' => 'cav', 'Haze_02428' => 'cav', 'Haze_05593' => 'cav', 'Haze_06448' => 'cav', 'Haze_09427' => 'cav', 'Haze_12022' => 'cav', 'Haze_17612' => 'cav', 'Haze_17928' => 'cav', 'Hma1.2p1_0032F.1_g019250' => 'hma', 'Hma1.2p1_0163F.1_g072690' => 'hma', 'Hma1.2p1_0265F.1_g106710' => 'hma', 'Hma1.2p1_0286F.1_g113970' => 'hma', 'Hma1.2p1_0363F.1_g136640' => 'hma', 'Hma1.2p1_0584F.1_g183470' => 'hma', 'Hma1.2p1_0885F.1_g232570' => 'hma', 'HPP92_006022' => 'vpl', 'HPP92_007320' => 'vpl', 'HPP92_011521' => 'vpl', 'HPP92_019387' => 'vpl', 'HPP92_024038' => 'vpl', 'Hund05891' => 'sun', 'Hund06450' => 'sun', 'Hund12053' => 'sun', 'Hund16800' => 'sun', 'Hund21222' => 'sun', 'Hund22896' => 'sun', 'Hund23746' => 'sun', 'Hund27083' => 'sun', 'Lalb_Chr02g0141831' => 'lal', 'Lalb_Chr02g0141841' => 'lal', 'Lalb_Chr05g0220411' => 'lal', 'Lalb_Chr06g0162081' => 'lal', 'Lalb_Chr09g0327651' => 'lal', 'Lalb_Chr13g0295051' => 'lal', 'Lalb_Chr15g0086801' => 'lal', 'Lalb_Chr16g0383781' => 'lal', 'Lalb_Chr16g0383791' => 'lal', 'Lalb_Chr18g0055441' => 'lal', 'Lalb_Chr18g0059611' => 'lal', 'Lalb_Chr20g0109661' => 'lal', 'Lalb_Chr20g0109831' => 'lal', 'Lalb_Chr20g0121871' => 'lal', 'Lalb_Chr22g0355361' => 'lal', 'Lalb_Chr25g0286371' => 'lal', 'Lj1A1187G43' => 'lonja', 'Lj1A1205T50' => 'lonja', 'Lj1A800G33' => 'lonja', 'Lj1C1187T7' => 'lonja', 'Lj1C843T11' => 'lonja', 'Lj1g0010940' => 'lja', 'Lj2A288T69' => 'lonja', 'Lj3g0024276' => 'lja', 'Lj4A47T76' => 'lonja', 'Lj4g0005805' => 'lja', 'Lj4g0006097' => 'lja', 'Lj4g0008528' => 'lja', 'Lj4g0024907' => 'lja', 'Lj5g0012472' => 'lja', 'Lj5g0018648' => 'lja', 'Lj6C789G1' => 'lonja', 'Lj6g0004000' => 'lja', 'Lj7A292G67' => 'lonja', 'Lj7A292T64' => 'lonja', 'Lj9A400T58' => 'lonja', 'Lsat_1_v5_gn_1_126181' => 'lsa', 'Lsat_1_v5_gn_4_123041' => 'lsa', 'Lsat_1_v5_gn_4_133620' => 'lsa', 'Lsat_1_v5_gn_4_53221' => 'lsa', 'Lsat_1_v5_gn_4_71961' => 'lsa', 'Lsat_1_v5_gn_7_105241' => 'lsa', 'Lsat_1_v5_gn_7_21361' => 'lsa', 'Lsat_1_v5_gn_7_28860' => 'lsa', 'Lsat_1_v5_gn_7_31260' => 'lsa', 'Lsat_1_v5_gn_8_52801' => 'lsa', 'Manes.02G191400' => 'mes', 'Manes.03G110100' => 'mes', 'Manes.04G071100' => 'mes', 'Manes.05G100500' => 'mes', 'Manes.05G164700' => 'mes', 'Manes.15G087000' => 'mes', 'Manes.15G121500' => 'mes', 'Manes.16G028300' => 'mes', 'Manes.17G046100' => 'mes', 'Manes.17G069800' => 'mes', 'Manes.18G100500' => 'mes', 'Mapoly0002s0109' => 'mpo', 'Mapoly0024s0007' => 'mpo', 'Mapoly0089s0032' => 'mpo', 'MBI04_g42241_MAGBIO' => 'mbi', 'MBI05_g11988_MAGBIO' => 'mbi', 'MBI05_g35452_MAGBIO' => 'mbi', 'MBI07_g30179_MAGBIO' => 'mbi', 'MBI07_g35859_MAGBIO' => 'mbi', 'MBI07_g35860_MAGBIO' => 'mbi', 'MBI07_g37166_MAGBIO' => 'mbi', 'MBI08_g18172_MAGBIO' => 'mbi', 'MBI09_g08441_MAGBIO' => 'mbi', 'MBI13_g01676_MAGBIO' => 'mbi', 'MBI14_g42955_MAGBIO' => 'mbi', 'MBI16_g13161_MAGBIO' => 'mbi', 'MBI17_g27204_MAGBIO' => 'mbi', 'MBI19_g21595_MAGBIO' => 'mbi', 'MD00G1148400' => 'mdo', 'MD02G1301200' => 'mdo', 'MD03G1227800' => 'mdo', 'MD05G1041100' => 'mdo', 'MD05G1124800' => 'mdo', 'MD05G1284000' => 'mdo', 'MD05G1338800' => 'mdo', 'MD05G1338900' => 'mdo', 'MD07G1022800' => 'mdo', 'MD10G1047500' => 'mdo', 'MD10G1127500' => 'mdo', 'MD10G1262300' => 'mdo', 'MD10G1293800' => 'mdo', 'MD16G1074300' => 'mdo', 'Medtr1g021670' => 'mtr', 'Medtr1g096320' => 'mtr', 'Medtr2g013690' => 'mtr', 'Medtr2g019450' => 'mtr', 'Medtr2g085170' => 'mtr', 'Medtr4g088785' => 'mtr', 'Medtr8g055930' => 'mtr', 'Medtr8g085850' => 'mtr', 'MELO3C002605.2' => 'cme', 'MELO3C003891.2' => 'cme', 'MELO3C004012.2' => 'cme', 'MELO3C007134.2' => 'cme', 'MELO3C008118.2' => 'cme', 'MELO3C016700.2' => 'cme', 'MELO3C024127.2' => 'cme', 'MELO3C033361.2' => 'cme', 'MELO3C033362.2' => 'cme', 'Migut.C00430' => 'egut', 'Migut.C01246' => 'egut', 'Migut.E00101' => 'egut', 'Migut.H01486' => 'egut', 'Migut.H01939' => 'egut', 'Migut.K00360' => 'egut', 'Migut.M00910' => 'egut', 'Migut.M01139' => 'egut', 'Migut.N02677' => 'egut', 'MSTRG.13252' => 'ama', 'MSTRG.14701' => 'ama', 'MSTRG.1521' => 'ama', 'MSTRG.15884' => 'ama', 'MSTRG.16242' => 'ama', 'MSTRG.22285' => 'ama', 'MSTRG.22444' => 'ama', 'MSTRG.2349' => 'ama', 'MSTRG.26308' => 'ama', 'MSTRG.28296' => 'ama', 'MSTRG.9895' => 'ama', 'Nitab4.5_0000110g0060' => 'nta', 'Nitab4.5_0000420g0130' => 'nta', 'Nitab4.5_0000422g0030' => 'nta', 'Nitab4.5_0000560g0180' => 'nta', 'Nitab4.5_0000703g0100' => 'nta', 'Nitab4.5_0000786g0200' => 'nta', 'Nitab4.5_0001336g0020' => 'nta', 'Nitab4.5_0001796g0030' => 'nta', 'Nitab4.5_0003348g0060' => 'nta', 'Nitab4.5_0003698g0040' => 'nta', 'Nitab4.5_0003942g0090' => 'nta', 'Nitab4.5_0004775g0070' => 'nta', 'Nitab4.5_0004864g0030' => 'nta', 'Nitab4.5_0005615g0020' => 'nta', 'Nitab4.5_0009288g0030' => 'nta', 'Nitab4.5_0009341g0010' => 'nta', 'Nitab4.5_0009535g0010' => 'nta', 'Nn1g03995' => 'nnu', 'Nn1g04100' => 'nnu', 'Nn1g06530' => 'nnu', 'Nn3g16404' => 'nnu', 'Nn3g17212' => 'nnu', 'Nn3g20776' => 'nnu', 'Nn3g21923' => 'nnu', 'Nn5g27737' => 'nnu', 'Nn5g29461' => 'nnu', 'Nn7g38355' => 'nnu', 'Nn8g39873' => 'nnu', 'Oeu000548.2' => 'oeu', 'Oeu004672.1' => 'oeu', 'Oeu015605.2' => 'oeu', 'Oeu016092.1' => 'oeu', 'Oeu017879.3' => 'oeu', 'Oeu024910.1' => 'oeu', 'Oeu028965.1' => 'oeu', 'Oeu031269.1' => 'oeu', 'Oeu031270.1' => 'oeu', 'Oeu032535.1' => 'oeu', 'Oeu034151.1' => 'oeu', 'Oeu034152.1' => 'oeu', 'Oeu034588.2' => 'oeu', 'Oeu050846.1' => 'oeu', 'Oeu050849.2' => 'oeu', 'Oeu051063.2' => 'oeu', 'Oeu052368.1' => 'oeu', 'Oeu052370.1' => 'oeu', 'Os01g0210400' => 'osa', 'Os01g0304300' => 'osa', 'Os01g0749100' => 'osa', 'Os02g0745800' => 'osa', 'Os03g0769050' => 'osa', 'Os05g0531500' => 'osa', 'Os06g0724300' => 'osa', 'Os11g0198100' => 'osa', 'Peaxi162Scf00069g01425' => 'pax', 'Peaxi162Scf00280g00811' => 'pax', 'Peaxi162Scf00310g00615' => 'pax', 'Peaxi162Scf00362g00542' => 'pax', 'Peaxi162Scf00461g00310' => 'pax', 'Peaxi162Scf00530g00118' => 'pax', 'Peaxi162Scf00541g00057' => 'pax', 'Peaxi162Scf00661g00017' => 'pax', 'Peaxi162Scf00926g00027' => 'pax', 'Peaxi162Scf01064g00263' => 'pax', 'Peaxi162Scf01211g00135' => 'pax', 'PGR004G2336' => 'pgr', 'PGR042G0327' => 'pgr', 'PGR042G1957' => 'pgr', 'PGR042G2003' => 'pgr', 'PGR042G3929' => 'pgr', 'PGR083G1137' => 'pgr', 'PGR083G1364' => 'pgr', 'PGSC0003DMG400003381' => 'stu', 'PGSC0003DMG400003417' => 'stu', 'PGSC0003DMG400008981' => 'stu', 'PGSC0003DMG400012417' => 'stu', 'PGSC0003DMG400012823' => 'stu', 'PGSC0003DMG400016885' => 'stu', 'PGSC0003DMG400022812' => 'stu', 'PGSC0003DMG400029726' => 'stu', 'PGSC0003DMG401009243' => 'stu', 'PGSC0003DMG401031505' => 'stu', 'PGSC0003DMG402031505' => 'stu', 'Phvul.001G017600' => 'pvu', 'Phvul.002G193500' => 'pvu', 'Phvul.002G228900' => 'pvu', 'Phvul.002G236800' => 'pvu', 'Phvul.003G049500' => 'pvu', 'Phvul.005G072000' => 'pvu', 'Phvul.006G164800' => 'pvu', 'Phvul.006G185100' => 'pvu', 'Phvul.007G090000' => 'pvu', 'Potri.001G399800' => 'ptr', 'Potri.002G149900' => 'ptr', 'Potri.004G044100' => 'ptr', 'Potri.004G177600' => 'ptr', 'Potri.009G138000' => 'ptr', 'Potri.010G094000' => 'ptr', 'Potri.011G053000' => 'ptr', 'Potri.011G119300' => 'ptr', 'Potri.013G113700' => 'ptr', 'Potri.018G107800' => 'ptr', 'Potri.019G084100' => 'ptr', 'Pp3c14_23720' => 'ppa', 'Pp3c16_6340' => 'ppa', 'Pp3c23_13420' => 'ppa', 'Pp3c24_2740' => 'ppa', 'Pp3c25_860' => 'ppa', 'Pp3c8_21750' => 'ppa', 'Prupe.1G273000' => 'ppe', 'Prupe.1G273700' => 'ppe', 'Prupe.1G274100' => 'ppe', 'Prupe.2G023300' => 'ppe', 'Prupe.4G048000' => 'ppe', 'Prupe.4G080400' => 'ppe', 'Prupe.4G181200' => 'ppe', 'Prupe.8G056900' => 'ppe', 'Prupe.8G168700' => 'ppe', 'Psat1g189080' => 'psa', 'Psat1g204760' => 'psa', 'Psat4g175560' => 'psa', 'Psat4g177720' => 'psa', 'Psat5g244240' => 'psa', 'Psat6g010720' => 'psa', 'Psat6g187200' => 'psa', 'Psat7g072040' => 'psa', 'PSO017G3501' => 'pso', 'PSO063G2148' => 'pso', 'PSO063G5608' => 'pso', 'PSO210G6392' => 'pso', 'PSO541G2319' => 'pso', 'PSO541G2836' => 'pso', 'PSO541G4012' => 'pso', 'PSO541G6253' => 'pso', 'PSO675G0580' => 'pso', 'PSO675G0856' => 'pso', 'PSO675G5635' => 'pso', 'PSO675G9157' => 'pso', 'PSO832G1660' => 'pso', 'PSO832G1969' => 'pso', 'QL02p007186' => 'qlo', 'QL02p033904' => 'qlo', 'QL03p064391' => 'qlo', 'QL05p040593' => 'qlo', 'QL05p058242' => 'qlo', 'QL08p021825' => 'qlo', 'QL11p004981' => 'qlo', 'RcHm_v2.0_Chr1g0318301' => 'rch', 'RcHm_v2.0_Chr4g0418501' => 'rch', 'RcHm_v2.0_Chr4g0439971' => 'rch', 'RcHm_v2.0_Chr5g0008541' => 'rch', 'RcHm_v2.0_Chr5g0014101' => 'rch', 'RcHm_v2.0_Chr5g0014131' => 'rch', 'RcHm_v2.0_Chr5g0033621' => 'rch', 'RcHm_v2.0_Chr6g0272041' => 'rch', 'RcHm_v2.0_Chr6g0278831' => 'rch', 'Rhsim02G0130400' => 'rsi', 'Rhsim02G0171100' => 'rsi', 'Rhsim05G0053000' => 'rsi', 'Rhsim05G0053100' => 'rsi', 'Rhsim06G0096500' => 'rsi', 'Rhsim06G0096600' => 'rsi', 'Rhsim06G0199100' => 'rsi', 'Rhsim12G0062300' => 'rsi', 'Rhsim12G0062800' => 'rsi', 'Sabra02G0118600' => 'sbr', 'Sabra04G0027300' => 'sbr', 'Sabra04G0119500' => 'sbr', 'Sabra08G0112500' => 'sbr', 'Sabra11G0036800' => 'sbr', 'Sabra11G0103800' => 'sbr', 'Sabra13G0096300' => 'sbr', 'Sabra16G0262300' => 'sbr', 'Sabra18G0091700' => 'sbr', 'Sabra19G0095400' => 'sbr', 'SalBow6G3080' => 'sbo', 'SalBow7G1157' => 'sbo', 'SalBow7G2123' => 'sbo', 'SalBow7G2285' => 'sbo', 'SalBow7G3537' => 'sbo', 'SalBow8G2947' => 'sbo', 'SalBow8G4463' => 'sbo', 'SalBow8G5466' => 'sbo', 'Sc01g0001750' => 'sci', 'Sc02g0006640' => 'sci', 'Sc02g0006670' => 'sci', 'Sc04g0008220' => 'sci', 'Sc05g0006190' => 'sci', 'Sc08g0002760' => 'sci', 'Sc17g0006170' => 'sci', 'Sc22g0002050' => 'sci', 'Sc23g0001190' => 'sci', 'Sc24g0000980' => 'sci', 'Sed0006245' => 'sed', 'Sed0007543' => 'sed', 'Sed0009411' => 'sed', 'Sed0010765' => 'sed', 'Sed0012944' => 'sed', 'Sed0014682' => 'sed', 'Sed0016174' => 'sed', 'Sed0016796' => 'sed', 'Sed0020317' => 'sed', 'Sed0021467' => 'sed', 'SEGI_01316' => 'sgi', 'SEGI_03374' => 'sgi', 'SEGI_16265' => 'sgi', 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'Solyc03g079860.2' => 'sly', 'Solyc04g079770.3' => 'sly', 'Solyc05g007430.4' => 'sly', 'Solyc07g063150.3' => 'sly', 'Solyc08g016620.3' => 'sly', 'Solyc09g057590.3' => 'sly', 'Solyc09g057600.1' => 'sly', 'Solyc10g009050.3' => 'sly', 'Solyc11g017420.2' => 'sly', 'Sopen01g053810' => 'spe', 'Sopen02g023040' => 'spe', 'Sopen03g002440' => 'spe', 'Sopen04g033350' => 'spe', 'Sopen05g003310' => 'spe', 'Sopen07g004050' => 'spe', 'Sopen07g031340' => 'spe', 'Sopen08g006990' => 'spe', 'Sopen10g004830' => 'spe', 'Sopen11g009370' => 'spe', 'Sp1g24450' => 'spa', 'Sp1g29670' => 'spa', 'Sp1g39600' => 'spa', 'Sp2g11080' => 'spa', 'Sp2g13970' => 'spa', 'Sp4g16130' => 'spa', 'Sp6g13080' => 'spa', 'Sp7g37270' => 'spa', 'TAR371G0065' => 'tar', 'TAR376G0340' => 'tar', 'TAR376G0435' => 'tar', 'TAR381G0002' => 'tar', 'TAR381G1236' => 'tar', 'TAR624G0055' => 'tar', 'TAR624G0324' => 'tar', 'TAR624G0696' => 'tar', 'TAR624G0906' => 'tar', 'TAR625G0107' => 'tar', 'TAR626G0015' => 'tar', 'TAR626G1356' => 'tar', 'TAR627G0888' => 'tar', 'TAR628G0399' => 'tar', 'TAR628G1327' => 'tar', 'TAR629G2831' => 'tar', 'TAR629G2874' => 'tar', 'TAR633G1432' => 'tar', 'TAR633G2771' => 'tar', 'THA.LOC104803394' => 'tha', 'THA.LOC104805153' => 'tha', 'THA.LOC104806784' => 'tha', 'THA.LOC104810473' => 'tha', 'THA.LOC104813100' => 'tha', 'THA.LOC104814215' => 'tha', 'THA.LOC104815554' => 'tha', 'THA.LOC104820544' => 'tha', 'THA.LOC104824754' => 'tha', 'THA.LOC104827717' => 'tha', 'Thecc.02G031400' => 'tca', 'Thecc.02G055900' => 'tca', 'Thecc.02G350800' => 'tca', 'Thecc.06G150900' => 'tca', 'Thecc.06G186600' => 'tca', 'Thecc.07G089600' => 'tca', 'Thecc.08G020400' => 'tca', 'Thecc.08G182100' => 'tca', 'Thhalv10000873m.g' => 'esa', 'Thhalv10004185m.g' => 'esa', 'Thhalv10006981m.g' => 'esa', 'Thhalv10007204m.g' => 'esa', 'Thhalv10011374m.g' => 'esa', 'Thhalv10013482m.g' => 'esa', 'Thhalv10017801m.g' => 'esa', 'Thhalv10024983m.g' => 'esa', 'TPR.G12072' => 'tpr', 'TPR.G15769' => 'tpr', 'TPR.G16504' => 'tpr', 'TPR.G16506' => 'tpr', 'TPR.G24345' => 'tpr', 'TPR.G26666' => 'tpr', 'TPR.G27320' => 'tpr', 'TPR.G31819' => 'tpr', 'TPR.G38879' => 'tpr', 'TPR.G39015' => 'tpr', 'TPR.G8819' => 'tpr', 'TWI09G0924' => 'twi', 'TWI12G0811' => 'twi', 'TWI12G1294' => 'twi', 'TWI31G0150' => 'twi', 'TWI36G1262' => 'twi', 'TWI38G1287' => 'twi', 'TWI38G1633' => 'twi', 'TWI38G1982' => 'twi', 'TWI39G0116' => 'twi', 'TWI60G1011' => 'twi', 'TWI63G0171' => 'twi', 'TWI73G0839' => 'twi', 'TWI79G1511' => 'twi', 'unitig_0.g915' => 'ugi', 'unitig_0.g916' => 'ugi', 'unitig_21.g20219' => 'ugi', 'unitig_21.g20416' => 'ugi', 'unitig_578.g16132' => 'ugi', 'unitig_578.g16718' => 'ugi', 'unitig_62.g23481' => 'ugi', 'unitig_744.g24535' => 'ugi', 'unitig_749.g13525' => 'ugi', 'vmacro01248' => 'vma', 'vmacro02290' => 'vma', 'vmacro10946' => 'vma', 'vmacro11865' => 'vma', 'vmacro12493' => 'vma', 'vmacro17322' => 'vma', 'vmacro21599' => 'vma', 'vmacro23041' => 'vma', 'VMungo0251G0004' => 'vmu', 'VMungo0251G2639' => 'vmu', 'VMungo0251G2967' => 'vmu', 'VMungo0540G0864' => 'vmu', 'VMungo0540G1569' => 'vmu', 'VMungo0647G0317' => 'vmu', 'VMungo0720G1373' => 'vmu', 'VMungo0720G1508' => 'vmu', 'VMungo1080G0485' => 'vmu', 'VMungo1215G3177' => 'vmu', 'Zm00001eb112600' => 'zma', 'Zm00001eb120220' => 'zma', 'Zm00001eb153240' => 'zma', 'Zm00001eb168880' => 'zma', 'Zm00001eb213920' => 'zma', 'Zm00001eb228280' => 'zma', 'Zm00001eb254580' => 'zma', 'Zm00001eb272180' => 'zma', 'Zm00001eb293190' => 'zma', 'Zm00001eb322930' => 'zma', 'Zm00001eb353360' => 'zma', 'Zm00001eb353390' => 'zma', 'Zm00001eb353430' => 'zma', 'Zm00001eb353440' => 'zma', 'Zm00001eb353780' => 'zma' ), 'gf_id' => 'HOM05D000499', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000499' ), 'data_identifier' => 'HOM05D000499', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000499', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1066', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p29780' => 'bna', 'A02p33180' => 'bna', 'A03p16470' => 'bna', 'A03p66010' => 'bna', 'A04p25970' => 'bna', 'A06p01270' => 'bna', 'A06p46080' => 'bna', 'A07p11400' => 'bna', 'A08p01840' => 'bna', 'A08p08230' => 'bna', 'A08p25740' => 'bna', 'A09p32070' => 'bna', 'A09p37830' => 'bna', 'A09p42840' => 'bna', 'A09p42850' => 'bna', 'Aa31LG10G2060' => 'aar', 'Aa31LG2G7410' => 'aar', 'Aa31LG6G10200' => 'aar', 'Aa31LG6G16680' => 'aar', 'Aa31LG6G8470' => 'aar', 'Aa31LG9G12730' => 'aar', 'Aa31LG9G13680' => 'aar', 'Aa31LG9G14920' => 'aar', 'Aa31LG9G6650' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4977' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5467' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3254' => 'aag', 'Actinidia02578' => 'ach', 'Actinidia07693' => 'ach', 'Actinidia08413' => 'ach', 'Actinidia08414' => 'ach', 'Actinidia15289' => 'ach', 'Actinidia19871' => 'ach', 'Actinidia21475' => 'ach', 'Actinidia22576' => 'ach', 'Actinidia28327' => 'ach', 'Actinidia32491' => 'ach', 'Actinidia39463' => 'ach', 'Actinidia39571' => 'ach', 'Ah.01g013750' => 'amhyb', 'Ah.01g023210' => 'amhyb', 'Ah.04g164850' => 'amhyb', 'Ah.05g178060' => 'amhyb', 'Ah.07g204270' => 'amhyb', 'Ah.07g208480' => 'amhyb', 'Ah.09g237410' => 'amhyb', 'Ah.14g089460' => 'amhyb', 'AL1G41790' => 'aly', 'AL1G49050' => 'aly', 'AL1G53810' => 'aly', 'AL1G61400' => 'aly', 'AL4G18580' => 'aly', 'AL5G12510' => 'aly', 'AL5G12540' => 'aly', 'AL6G43230' => 'aly', 'AL7G10370' => 'aly', 'AL7G19250' => 'aly', 'AL8G12240' => 'aly', 'AL8G18540' => 'aly', 'Aqoxy1G02409' => 'aox', 'Aqoxy2G03993' => 'aox', 'Aqoxy3G03357' => 'aox', 'Aqoxy4G00785' => 'aox', 'Aqoxy5G02598' => 'aox', 'Aqoxy6G00132' => 'aox', 'Aqoxy7G01776' => 'aox', 'Aqoxy7G02316' => 'aox', 'Aqoxy7G03973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.12AFKW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B8730' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27IQR1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3F75VG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3RE0GA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41TCQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.527VTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FIR39' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5W8UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DA38EV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ63HS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H1I32C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HC27T5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4M8AP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7N3CZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9UVDZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LS1NQA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT1D4B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SKC4TM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCFV76' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF9Q1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQWD9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1ZM88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WE07RT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YCK7VH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJE6Q6' => 'arhy', 'AT1G28240' => 'ath', 'AT1G34550' => 'ath', 'AT1G53040' => 'ath', 'AT2G02910' => 'ath', 'AT4G09630' => 'ath', 'AT4G38500' => 'ath', 'AT5G42660' => 'ath', 'AT5G46220' => 'ath', 'ATR0152G026' => 'atr', 'ATR0564G343' => 'atr', 'ATR0706G151' => 'atr', 'ATR0733G207' => 'atr', 'ATR0751G234' => 'atr', 'ATR0807G048' => 'atr', 'ATR1091G084' => 'atr', 'Atru.chr10.1229' => 'acertr', 'Atru.chr10.1230' => 'acertr', 'Atru.chr10.1874' => 'acertr', 'Atru.chr11.1808' => 'acertr', 'Atru.chr13.1795' => 'acertr', 'Atru.chr13.570' => 'acertr', 'Atru.chr2.2608' => 'acertr', 'Atru.chr2.2609' => 'acertr', 'Atru.chr5.3428' => 'acertr', 'Atru.chr8.1171' => 'acertr', 'AUR62004651' => 'cqu', 'AUR62008675' => 'cqu', 'AUR62010014' => 'cqu', 'AUR62013004' => 'cqu', 'AUR62014825' => 'cqu', 'AUR62015015' => 'cqu', 'AUR62015151' => 'cqu', 'AUR62017020' => 'cqu', 'AUR62019422' => 'cqu', 'AUR62023570' => 'cqu', 'AUR62025571' => 'cqu', 'AUR62029098' => 'cqu', 'AUR62033863' => 'cqu', 'AUR62034296' => 'cqu', 'AUR62040075' => 'cqu', 'BcaB02g07334' => 'bca', 'BcaB02g10575' => 'bca', 'BcaB03g12119' => 'bca', 'BcaB03g12120' => 'bca', 'BcaB03g13945' => 'bca', 'BcaB04g17123' => 'bca', 'BcaB04g17867' => 'bca', 'BcaB04g19839' => 'bca', 'BcaB07g30317' => 'bca', 'BcaB07g32432' => 'bca', 'BcaB07g33362' => 'bca', 'BcaB08g36611' => 'bca', 'BcaC01g00028' => 'bca', 'BcaC01g01356' => 'bca', 'BcaC01g02034' => 'bca', 'BcaC01g06051' => 'bca', 'BcaC03g16839' => 'bca', 'BcaC03g17176' => 'bca', 'BcaC05g26829' => 'bca', 'BcaC06g31490' => 'bca', 'BcaC06g35344' => 'bca', 'BcaC06g36570' => 'bca', 'BcaC07g37537' => 'bca', 'BcaC08g43491' => 'bca', 'BcaC08g43773' => 'bca', 'BcaNung00234' => 'bca', 'BcaNung01982' => 'bca', 'BcaNung03707' => 'bca', 'BcaNung06454' => 'bca', 'BolC2t10762H' => 'bol', 'BolC2t11191H' => 'bol', 'BolC3t14322H' => 'bol', 'BolC3t19747H' => 'bol', 'BolC3t21425H' => 'bol', 'BolC4t27800H' => 'bol', 'BolC5t31423H' => 'bol', 'BolC6t35951H' => 'bol', 'BolC6t36282H' => 'bol', 'BolC7t40678H' => 'bol', 'BolC7t40679H' => 'bol', 'BolC7t42222H' => 'bol', 'BolC7t43492H' => 'bol', 'BolC7t46785H' => 'bol', 'BolC8t47853H' => 'bol', 'BolC9t56805H' => 'bol', 'BraA02t08000Z' => 'bra', 'BraA02t08341Z' => 'bra', 'BraA03t10936Z' => 'bra', 'BraA03t15657Z' => 'bra', 'BraA04t18100Z' => 'bra', 'BraA05t20523Z' => 'bra', 'BraA06t23353Z' => 'bra', 'BraA06t27473Z' => 'bra', 'BraA06t27769Z' => 'bra', 'BraA07t28928Z' => 'bra', 'BraA08t32236Z' => 'bra', 'BraA08t32841Z' => 'bra', 'BraA08t34524Z' => 'bra', 'BraA09t38742Z' => 'bra', 'BraA09t39295Z' => 'bra', 'C02p47180' => 'bna', 'C02p50990' => 'bna', 'C03p19360' => 'bna', 'C03p74950' => 'bna', 'C03p91000' => 'bna', 'C04p63260' => 'bna', 'C05p27050' => 'bna', 'C06p08750' => 'bna', 'C06p11490' => 'bna', 'C07p02820' => 'bna', 'C07p17180' => 'bna', 'C07p29440' => 'bna', 'C07p63730' => 'bna', 'C09p39260' => 'bna', 'CAN.G1164.34' => 'can', 'CAN.G1164.39' => 'can', 'CAN.G1530.3' => 'can', 'CAN.G162.61' => 'can', 'CAN.G176.6' => 'can', 'CAN.G289.49' => 'can', 'CAN.G370.21' => 'can', 'CAN.G370.22' => 'can', 'CAN.G371.117' => 'can', 'CAN.G58.37' => 'can', 'CAN.G588.98' => 'can', 'CANSAT21G2266' => 'cansat', 'CANSAT25G2799' => 'cansat', 'CANSAT35G0862' => 'cansat', 'CANSAT35G1704' => 'cansat', 'CANSAT35G1760' => 'cansat', 'CANSAT56G3971' => 'cansat', 'CANSAT56G4116' => 'cansat', 'CANSAT80G1259' => 'cansat', 'CARHR027730' => 'chi', 'CARHR033880' => 'chi', 'CARHR043270' => 'chi', 'CARHR145330' => 'chi', 'CARHR145340' => 'chi', 'CARHR175570' => 'chi', 'CARHR181570' => 'chi', 'CARHR258470' => 'chi', 'CARHR260490' => 'chi', 'CARHR294220' => 'chi', 'Carub.0001s2668' => 'cru', 'Carub.0001s3257' => 'cru', 'Carub.0001s4220' => 'cru', 'Carub.0005s0179' => 'cru', 'Carub.0006s2807' => 'cru', 'Carub.0007s0039' => 'cru', 'Carub.0008s0169' => 'cru', 'Carub.0008s0636' => 'cru', 'Ca_00338_v3' => 'car', 'Ca_00542_v3' => 'car', 'Ca_01844_v3' => 'car', 'Ca_10611_v3' => 'car', 'Ca_13326_v3' => 'car', 'Ca_17944_v3' => 'car', 'Ca_18546_v3' => 'car', 'Ca_24219_v3' => 'car', 'Ca_29972_v3' => 'car', 'CBR_g3681' => 'cbr', 'CBR_g40021' => 'cbr', 'Cc01_g08140' => 'ccan', 'Cc02_g13410' => 'ccan', 'Cc02_g37480' => 'ccan', 'Cc05_g12030' => 'ccan', 'Cc09_g03370' => 'ccan', 'Cc09_g10300' => 'ccan', 'Cc10_g03530' => 'ccan', 'Cc10_g11380' => 'ccan', 'CDE01G0176' => 'cde', 'CDE02G0675' => 'cde', 'CDE02G0942' => 'cde', 'CDE02G1153' => 'cde', 'CDE02G4177' => 'cde', 'CDE04G2117' => 'cde', 'CDE04G2736' => 'cde', 'CDE08G1161' => 'cde', 'CDE09G1238' => 'cde', 'Cfa000467' => 'cfa', 'Cfa000947' => 'cfa', 'Cfa004969' => 'cfa', 'Cfa005284' => 'cfa', 'Cfa008993' => 'cfa', 'Cfa018187' => 'cfa', 'Cfa018454' => 'cfa', 'Cfa020585' => 'cfa', 'Ciclev10000424m.g' => 'ccl', 'Ciclev10003605m.g' => 'ccl', 'Ciclev10007828m.g' => 'ccl', 'Ciclev10014620m.g' => 'ccl', 'Ciclev10015169m.g' => 'ccl', 'Ciclev10018291m.g' => 'ccl', 'Ciclev10028256m.g' => 'ccl', 'Ciclev10033822m.g' => 'ccl', 'CiPaw.05G060300' => 'cil', 'CiPaw.05G085000' => 'cil', 'CiPaw.06G083700' => 'cil', 'CiPaw.06G120300' => 'cil', 'CiPaw.09G060500' => 'cil', 'CiPaw.09G123800' => 'cil', 'CiPaw.11G169700' => 'cil', 'CiPaw.12G118300' => 'cil', 'CiPaw.15G071000' => 'cil', 'CiPaw.15G081900' => 'cil', 'ClCG01G024610' => 'cla', 'ClCG03G006070' => 'cla', 'ClCG05G019250' => 'cla', 'ClCG09G009500' => 'cla', 'ClCG11G008200' => 'cla', 'ClCG11G018080' => 'cla', 'COL.COLO4_17373' => 'col', 'COL.COLO4_22994' => 'col', 'COL.COLO4_26389' => 'col', 'COL.COLO4_27170' => 'col', 'COL.COLO4_31074' => 'col', 'COL.COLO4_31465' => 'col', 'COL.COLO4_36438' => 'col', 'COL.COLO4_36439' => 'col', 'Cpa.g.c38781' => 'cpa', 'Cpa.g.sc128.12' => 'cpa', 'Cpa.g.sc166.7' => 'cpa', 'Cpa.g.sc166.8' => 'cpa', 'Cpa.g.sc20.111' => 'cpa', 'Cpa.g.sc27.31' => 'cpa', 'Cpa.g.sc64.36' => 'cpa', 'Cpa.g.sc64.37' => 'cpa', 'Cpa.g.sc66.49' => 'cpa', 'Cpa.g.sc80.64' => 'cpa', 'CsaV3_1G012320' => 'csa', 'CsaV3_2G008480' => 'csa', 'CsaV3_2G033450' => 'csa', 'CsaV3_3G044830' => 'csa', 'CsaV3_4G033710' => 'csa', 'CsaV3_6G051730' => 'csa', 'CsaV3_7G025350' => 'csa', 'CSS0001067' => 'camsi', 'CSS0005996' => 'camsi', 'CSS0006590' => 'camsi', 'CSS0009673' => 'camsi', 'CSS0010201' => 'camsi', 'CSS0010549' => 'camsi', 'CSS0011364' => 'camsi', 'CSS0014473' => 'camsi', 'CSS0014961' => 'camsi', 'CSS0020191' => 'camsi', 'CSS0021165' => 'camsi', 'CSS0022306' => 'camsi', 'CSS0030591' => 'camsi', 'CSS0030696' => 'camsi', 'CSS0032653' => 'camsi', 'CSS0037487' => 'camsi', 'CSS0041102' => 'camsi', 'CSS0041261' => 'camsi', 'CSS0046246' => 'camsi', 'CSS0049256' => 'camsi', 'DCAR_004075' => 'dca', 'DCAR_011538' => 'dca', 'DCAR_019553' => 'dca', 'DCAR_020952' => 'dca', 'DCAR_021739' => 'dca', 'DCAR_027407' => 'dca', 'DCAR_027913' => 'dca', 'DCAR_028066' => 'dca', 'Dinv05899' => 'din', 'Dinv07563' => 'din', 'Dinv08010' => 'din', 'Dinv14125' => 'din', 'Dinv20172' => 'din', 'Dinv30743' => 'din', 'Dinv31229' => 'din', 'Dinv34162' => 'din', 'Dinv36028' => 'din', 'Dinv39368' => 'din', 'Dinv40565' => 'din', 'Dinv41706' => 'din', 'Duzib052G0089' => 'dzi', 'Duzib116G0641' => 'dzi', 'Duzib132G0069' => 'dzi', 'Duzib132G1219' => 'dzi', 'Duzib147G0278' => 'dzi', 'Duzib160G0480' => 'dzi', 'Duzib170G0661' => 'dzi', 'Duzib177G0591' => 'dzi', 'Duzib187G1353' => 'dzi', 'Duzib192G0858' => 'dzi', 'Duzib192G0883' => 'dzi', 'Duzib213G0506' => 'dzi', 'Duzib235G0289' => 'dzi', 'Duzib251G0422' => 'dzi', 'ECA232G3898' => 'eca', 'ECA233G5950' => 'eca', 'ECA234G1699' => 'eca', 'ECA234G2421' => 'eca', 'ECA236G0426' => 'eca', 'ECA236G4331' => 'eca', 'ECA248G2573' => 'eca', 'EL10Ac1g00077' => 'bvu', 'EL10Ac1g01746' => 'bvu', 'EL10Ac2g03464' => 'bvu', 'EL10Ac4g08176' => 'bvu', 'EL10Ac7g17521' => 'bvu', 'EL10Ac8g20386' => 'bvu', 'EL10Ac9g21343' => 'bvu', 'EL10Ac9g22688' => 'bvu', 'Eucgr.B03434' => 'egr', 'Eucgr.D00618' => 'egr', 'Eucgr.E02395' => 'egr', 'Eucgr.F01129' => 'egr', 'Eucgr.F02622' => 'egr', 'Eucgr.F04207' => 'egr', 'FAN01G0570' => 'fan', 'FAN03G3351' => 'fan', 'FAN06G3702' => 'fan', 'FAN07G2149' => 'fan', 'FAN10G3758' => 'fan', 'FAN11G1170' => 'fan', 'FAN11G2050' => 'fan', 'FAN11G2724' => 'fan', 'FAN12G1700' => 'fan', 'FAN12G2028' => 'fan', 'FAN15G1160' => 'fan', 'FAN15G3063' => 'fan', 'FAN16G2540' => 'fan', 'FAN16G3077' => 'fan', 'FAN16G3624' => 'fan', 'FAN17G0221' => 'fan', 'FAN20G2492' => 'fan', 'FAN20G2905' => 'fan', 'FAN21G0548' => 'fan', 'FAN21G1300' => 'fan', 'FAN22G0077' => 'fan', 'FAN22G1315' => 'fan', 'FAN24G1280' => 'fan', 'FAN24G1445' => 'fan', 'FAN24G3527' => 'fan', 'FAN25G0464' => 'fan', 'FAN25G2885' => 'fan', 'FAN25G3270' => 'fan', 'FAN27G1101' => 'fan', 'FAN27G2846' => 'fan', 'FAN27G3524' => 'fan', 'FvH4_2g11770' => 'fve', 'FvH4_2g15630' => 'fve', 'FvH4_3g05570' => 'fve', 'FvH4_3g09110' => 'fve', 'FvH4_3g19940' => 'fve', 'FvH4_4g04821' => 'fve', 'FvH4_4g31480' => 'fve', 'FvH4_7g01740' => 'fve', 'Glyma.05G130400' => 'gma', 'Glyma.05G156400' => 'gma', 'Glyma.07G197000' => 'gma', 'Glyma.08G085151' => 'gma', 'Glyma.08G114500' => 'gma', 'Glyma.08G300400' => 'gma', 'Glyma.10G215800' => 'gma', 'Glyma.12G224400' => 'gma', 'Glyma.13G179300' => 'gma', 'Glyma.13G218151' => 'gma', 'Glyma.13G238800' => 'gma', 'Glyma.13G276900' => 'gma', 'Glyma.14G078200' => 'gma', 'Glyma.15G074500' => 'gma', 'Glyma.15G094100' => 'gma', 'Glyma.17G247200' => 'gma', 'Glyma.18G120100' => 'gma', 'Glyma.20G176000' => 'gma', 'Gohir.A01G063600' => 'ghi', 'Gohir.A01G170301' => 'ghi', 'Gohir.A02G060500' => 'ghi', 'Gohir.A05G133850' => 'ghi', 'Gohir.A05G161400' => 'ghi', 'Gohir.A06G012900' => 'ghi', 'Gohir.A06G035901' => 'ghi', 'Gohir.A06G127100' => 'ghi', 'Gohir.A06G210500' => 'ghi', 'Gohir.A08G008650' => 'ghi', 'Gohir.A09G072700' => 'ghi', 'Gohir.A09G088301' => 'ghi', 'Gohir.A10G040600' => 'ghi', 'Gohir.A12G036300' => 'ghi', 'Gohir.A12G143350' => 'ghi', 'Gohir.A12G165500' => 'ghi', 'Gohir.A13G145700' => 'ghi', 'Gohir.D01G050000' => 'ghi', 'Gohir.D01G051366' => 'ghi', 'Gohir.D01G161350' => 'ghi', 'Gohir.D02G065900' => 'ghi', 'Gohir.D05G164200' => 'ghi', 'Gohir.D05G355500' => 'ghi', 'Gohir.D06G010400' => 'ghi', 'Gohir.D06G111250' => 'ghi', 'Gohir.D06G132000' => 'ghi', 'Gohir.D06G210500' => 'ghi', 'Gohir.D07G165675' => 'ghi', 'Gohir.D08G062240' => 'ghi', 'Gohir.D08G086101' => 'ghi', 'Gohir.D08G138060' => 'ghi', 'Gohir.D09G072300' => 'ghi', 'Gohir.D10G041400' => 'ghi', 'Gohir.D11G191020' => 'ghi', 'Gohir.D11G212066' => 'ghi', 'Gohir.D12G036300' => 'ghi', 'Gohir.D12G168600' => 'ghi', 'Gohir.D13G150600' => 'ghi', 'Gorai.001G057300' => 'gra', 'Gorai.002G069900' => 'gra', 'Gorai.002G200000' => 'gra', 'Gorai.003G067600' => 'gra', 'Gorai.005G074800' => 'gra', 'Gorai.006G087300' => 'gra', 'Gorai.008G037500' => 'gra', 'Gorai.008G181400' => 'gra', 'Gorai.009G169400' => 'gra', 'Gorai.009G387900' => 'gra', 'Gorai.010G013300' => 'gra', 'Gorai.010G153800' => 'gra', 'Gorai.010G255800' => 'gra', 'Gorai.011G043700' => 'gra', 'Gorai.011G198900' => 'gra', 'Gorai.013G168400' => 'gra', 'GSVIVG01005212001' => 'vvi', 'GSVIVG01006163001' => 'vvi', 'GSVIVG01009625001' => 'vvi', 'GSVIVG01014338001' => 'vvi', 'GSVIVG01020005001' => 'vvi', 'GSVIVG01021450001' => 'vvi', 'GSVIVG01023975001' => 'vvi', 'GSVIVG01034490001' => 'vvi', 'HanXRQChr04g0112071' => 'han', 'HanXRQChr05g0131151' => 'han', 'HanXRQChr09g0262371' => 'han', 'HanXRQChr09g0268401' => 'han', 'HanXRQChr10g0279241' => 'han', 'HanXRQChr10g0297961' => 'han', 'HanXRQChr11g0326231' => 'han', 'HanXRQChr11g0328471' => 'han', 'HanXRQChr16g0507941' => 'han', 'HanXRQChr17g0560211' => 'han', 'Haze_02108' => 'cav', 'Haze_02428' => 'cav', 'Haze_05593' => 'cav', 'Haze_06448' => 'cav', 'Haze_09427' => 'cav', 'Haze_12022' => 'cav', 'Haze_17612' => 'cav', 'Haze_17928' => 'cav', 'Hma1.2p1_0032F.1_g019250' => 'hma', 'Hma1.2p1_0163F.1_g072690' => 'hma', 'Hma1.2p1_0265F.1_g106710' => 'hma', 'Hma1.2p1_0286F.1_g113970' => 'hma', 'Hma1.2p1_0363F.1_g136640' => 'hma', 'Hma1.2p1_0584F.1_g183470' => 'hma', 'Hma1.2p1_0885F.1_g232570' => 'hma', 'HPP92_006022' => 'vpl', 'HPP92_007320' => 'vpl', 'HPP92_011521' => 'vpl', 'HPP92_019387' => 'vpl', 'HPP92_024038' => 'vpl', 'Hund05891' => 'sun', 'Hund06450' => 'sun', 'Hund12053' => 'sun', 'Hund16800' => 'sun', 'Hund21222' => 'sun', 'Hund22896' => 'sun', 'Hund23746' => 'sun', 'Hund27083' => 'sun', 'Lalb_Chr02g0141831' => 'lal', 'Lalb_Chr02g0141841' => 'lal', 'Lalb_Chr05g0220411' => 'lal', 'Lalb_Chr06g0162081' => 'lal', 'Lalb_Chr09g0327651' => 'lal', 'Lalb_Chr13g0295051' => 'lal', 'Lalb_Chr15g0086801' => 'lal', 'Lalb_Chr16g0383781' => 'lal', 'Lalb_Chr16g0383791' => 'lal', 'Lalb_Chr18g0055441' => 'lal', 'Lalb_Chr18g0059611' => 'lal', 'Lalb_Chr20g0109661' => 'lal', 'Lalb_Chr20g0109831' => 'lal', 'Lalb_Chr20g0121871' => 'lal', 'Lalb_Chr22g0355361' => 'lal', 'Lalb_Chr25g0286371' => 'lal', 'Lj1A1187G43' => 'lonja', 'Lj1A1205T50' => 'lonja', 'Lj1A800G33' => 'lonja', 'Lj1C1187T7' => 'lonja', 'Lj1C843T11' => 'lonja', 'Lj1g0010940' => 'lja', 'Lj2A288T69' => 'lonja', 'Lj3g0024276' => 'lja', 'Lj4A47T76' => 'lonja', 'Lj4g0005805' => 'lja', 'Lj4g0006097' => 'lja', 'Lj4g0008528' => 'lja', 'Lj4g0024907' => 'lja', 'Lj5g0012472' => 'lja', 'Lj5g0018648' => 'lja', 'Lj6C789G1' => 'lonja', 'Lj6g0004000' => 'lja', 'Lj7A292G67' => 'lonja', 'Lj7A292T64' => 'lonja', 'Lj9A400T58' => 'lonja', 'Lsat_1_v5_gn_1_126181' => 'lsa', 'Lsat_1_v5_gn_4_123041' => 'lsa', 'Lsat_1_v5_gn_4_133620' => 'lsa', 'Lsat_1_v5_gn_4_53221' => 'lsa', 'Lsat_1_v5_gn_4_71961' => 'lsa', 'Lsat_1_v5_gn_7_105241' => 'lsa', 'Lsat_1_v5_gn_7_21361' => 'lsa', 'Lsat_1_v5_gn_7_28860' => 'lsa', 'Lsat_1_v5_gn_7_31260' => 'lsa', 'Lsat_1_v5_gn_8_52801' => 'lsa', 'Manes.02G191400' => 'mes', 'Manes.03G110100' => 'mes', 'Manes.04G071100' => 'mes', 'Manes.05G100500' => 'mes', 'Manes.05G164700' => 'mes', 'Manes.15G087000' => 'mes', 'Manes.15G121500' => 'mes', 'Manes.16G028300' => 'mes', 'Manes.17G046100' => 'mes', 'Manes.17G069800' => 'mes', 'Manes.18G100500' => 'mes', 'Mapoly0002s0109' => 'mpo', 'Mapoly0024s0007' => 'mpo', 'Mapoly0089s0032' => 'mpo', 'MBI04_g42241_MAGBIO' => 'mbi', 'MBI05_g11988_MAGBIO' => 'mbi', 'MBI05_g35452_MAGBIO' => 'mbi', 'MBI07_g30179_MAGBIO' => 'mbi', 'MBI07_g35859_MAGBIO' => 'mbi', 'MBI07_g35860_MAGBIO' => 'mbi', 'MBI07_g37166_MAGBIO' => 'mbi', 'MBI08_g18172_MAGBIO' => 'mbi', 'MBI09_g08441_MAGBIO' => 'mbi', 'MBI13_g01676_MAGBIO' => 'mbi', 'MBI14_g42955_MAGBIO' => 'mbi', 'MBI16_g13161_MAGBIO' => 'mbi', 'MBI17_g27204_MAGBIO' => 'mbi', 'MBI19_g21595_MAGBIO' => 'mbi', 'MD00G1148400' => 'mdo', 'MD02G1301200' => 'mdo', 'MD03G1227800' => 'mdo', 'MD05G1041100' => 'mdo', 'MD05G1124800' => 'mdo', 'MD05G1284000' => 'mdo', 'MD05G1338800' => 'mdo', 'MD05G1338900' => 'mdo', 'MD07G1022800' => 'mdo', 'MD10G1047500' => 'mdo', 'MD10G1127500' => 'mdo', 'MD10G1262300' => 'mdo', 'MD10G1293800' => 'mdo', 'MD16G1074300' => 'mdo', 'Medtr1g021670' => 'mtr', 'Medtr1g096320' => 'mtr', 'Medtr2g013690' => 'mtr', 'Medtr2g019450' => 'mtr', 'Medtr2g085170' => 'mtr', 'Medtr4g088785' => 'mtr', 'Medtr8g055930' => 'mtr', 'Medtr8g085850' => 'mtr', 'MELO3C002605.2' => 'cme', 'MELO3C003891.2' => 'cme', 'MELO3C004012.2' => 'cme', 'MELO3C007134.2' => 'cme', 'MELO3C008118.2' => 'cme', 'MELO3C016700.2' => 'cme', 'MELO3C024127.2' => 'cme', 'MELO3C033361.2' => 'cme', 'MELO3C033362.2' => 'cme', 'Migut.C00430' => 'egut', 'Migut.C01246' => 'egut', 'Migut.E00101' => 'egut', 'Migut.H01486' => 'egut', 'Migut.H01939' => 'egut', 'Migut.K00360' => 'egut', 'Migut.M00910' => 'egut', 'Migut.M01139' => 'egut', 'Migut.N02677' => 'egut', 'MSTRG.13252' => 'ama', 'MSTRG.14701' => 'ama', 'MSTRG.1521' => 'ama', 'MSTRG.15884' => 'ama', 'MSTRG.16242' => 'ama', 'MSTRG.22285' => 'ama', 'MSTRG.22444' => 'ama', 'MSTRG.2349' => 'ama', 'MSTRG.26308' => 'ama', 'MSTRG.28296' => 'ama', 'MSTRG.9895' => 'ama', 'Nitab4.5_0000110g0060' => 'nta', 'Nitab4.5_0000420g0130' => 'nta', 'Nitab4.5_0000422g0030' => 'nta', 'Nitab4.5_0000560g0180' => 'nta', 'Nitab4.5_0000703g0100' => 'nta', 'Nitab4.5_0000786g0200' => 'nta', 'Nitab4.5_0001336g0020' => 'nta', 'Nitab4.5_0001796g0030' => 'nta', 'Nitab4.5_0003348g0060' => 'nta', 'Nitab4.5_0003698g0040' => 'nta', 'Nitab4.5_0003942g0090' => 'nta', 'Nitab4.5_0004775g0070' => 'nta', 'Nitab4.5_0004864g0030' => 'nta', 'Nitab4.5_0005615g0020' => 'nta', 'Nitab4.5_0009288g0030' => 'nta', 'Nitab4.5_0009341g0010' => 'nta', 'Nitab4.5_0009535g0010' => 'nta', 'Nn1g03995' => 'nnu', 'Nn1g04100' => 'nnu', 'Nn1g06530' => 'nnu', 'Nn3g16404' => 'nnu', 'Nn3g17212' => 'nnu', 'Nn3g20776' => 'nnu', 'Nn3g21923' => 'nnu', 'Nn5g27737' => 'nnu', 'Nn5g29461' => 'nnu', 'Nn7g38355' => 'nnu', 'Nn8g39873' => 'nnu', 'Oeu000548.2' => 'oeu', 'Oeu004672.1' => 'oeu', 'Oeu015605.2' => 'oeu', 'Oeu016092.1' => 'oeu', 'Oeu017879.3' => 'oeu', 'Oeu024910.1' => 'oeu', 'Oeu028965.1' => 'oeu', 'Oeu031269.1' => 'oeu', 'Oeu031270.1' => 'oeu', 'Oeu032535.1' => 'oeu', 'Oeu034151.1' => 'oeu', 'Oeu034152.1' => 'oeu', 'Oeu034588.2' => 'oeu', 'Oeu050846.1' => 'oeu', 'Oeu050849.2' => 'oeu', 'Oeu051063.2' => 'oeu', 'Oeu052368.1' => 'oeu', 'Oeu052370.1' => 'oeu', 'Os01g0210400' => 'osa', 'Os01g0304300' => 'osa', 'Os01g0749100' => 'osa', 'Os02g0745800' => 'osa', 'Os03g0769050' => 'osa', 'Os05g0531500' => 'osa', 'Os06g0724300' => 'osa', 'Os11g0198100' => 'osa', 'Peaxi162Scf00069g01425' => 'pax', 'Peaxi162Scf00280g00811' => 'pax', 'Peaxi162Scf00310g00615' => 'pax', 'Peaxi162Scf00362g00542' => 'pax', 'Peaxi162Scf00461g00310' => 'pax', 'Peaxi162Scf00530g00118' => 'pax', 'Peaxi162Scf00541g00057' => 'pax', 'Peaxi162Scf00661g00017' => 'pax', 'Peaxi162Scf00926g00027' => 'pax', 'Peaxi162Scf01064g00263' => 'pax', 'Peaxi162Scf01211g00135' => 'pax', 'PGR004G2336' => 'pgr', 'PGR042G0327' => 'pgr', 'PGR042G1957' => 'pgr', 'PGR042G2003' => 'pgr', 'PGR042G3929' => 'pgr', 'PGR083G1137' => 'pgr', 'PGR083G1364' => 'pgr', 'PGSC0003DMG400003381' => 'stu', 'PGSC0003DMG400003417' => 'stu', 'PGSC0003DMG400008981' => 'stu', 'PGSC0003DMG400012417' => 'stu', 'PGSC0003DMG400012823' => 'stu', 'PGSC0003DMG400016885' => 'stu', 'PGSC0003DMG400022812' => 'stu', 'PGSC0003DMG400029726' => 'stu', 'PGSC0003DMG401009243' => 'stu', 'PGSC0003DMG401031505' => 'stu', 'PGSC0003DMG402031505' => 'stu', 'Phvul.001G017600' => 'pvu', 'Phvul.002G193500' => 'pvu', 'Phvul.002G228900' => 'pvu', 'Phvul.002G236800' => 'pvu', 'Phvul.003G049500' => 'pvu', 'Phvul.005G072000' => 'pvu', 'Phvul.006G164800' => 'pvu', 'Phvul.006G185100' => 'pvu', 'Phvul.007G090000' => 'pvu', 'Potri.001G399800' => 'ptr', 'Potri.002G149900' => 'ptr', 'Potri.004G044100' => 'ptr', 'Potri.004G177600' => 'ptr', 'Potri.009G138000' => 'ptr', 'Potri.010G094000' => 'ptr', 'Potri.011G053000' => 'ptr', 'Potri.011G119300' => 'ptr', 'Potri.013G113700' => 'ptr', 'Potri.018G107800' => 'ptr', 'Potri.019G084100' => 'ptr', 'Pp3c14_23720' => 'ppa', 'Pp3c16_6340' => 'ppa', 'Pp3c23_13420' => 'ppa', 'Pp3c24_2740' => 'ppa', 'Pp3c25_860' => 'ppa', 'Pp3c8_21750' => 'ppa', 'Prupe.1G273000' => 'ppe', 'Prupe.1G273700' => 'ppe', 'Prupe.1G274100' => 'ppe', 'Prupe.2G023300' => 'ppe', 'Prupe.4G048000' => 'ppe', 'Prupe.4G080400' => 'ppe', 'Prupe.4G181200' => 'ppe', 'Prupe.8G056900' => 'ppe', 'Prupe.8G168700' => 'ppe', 'Psat1g189080' => 'psa', 'Psat1g204760' => 'psa', 'Psat4g175560' => 'psa', 'Psat4g177720' => 'psa', 'Psat5g244240' => 'psa', 'Psat6g010720' => 'psa', 'Psat6g187200' => 'psa', 'Psat7g072040' => 'psa', 'PSO017G3501' => 'pso', 'PSO063G2148' => 'pso', 'PSO063G5608' => 'pso', 'PSO210G6392' => 'pso', 'PSO541G2319' => 'pso', 'PSO541G2836' => 'pso', 'PSO541G4012' => 'pso', 'PSO541G6253' => 'pso', 'PSO675G0580' => 'pso', 'PSO675G0856' => 'pso', 'PSO675G5635' => 'pso', 'PSO675G9157' => 'pso', 'PSO832G1660' => 'pso', 'PSO832G1969' => 'pso', 'QL02p007186' => 'qlo', 'QL02p033904' => 'qlo', 'QL03p064391' => 'qlo', 'QL05p040593' => 'qlo', 'QL05p058242' => 'qlo', 'QL08p021825' => 'qlo', 'QL11p004981' => 'qlo', 'RcHm_v2.0_Chr1g0318301' => 'rch', 'RcHm_v2.0_Chr4g0418501' => 'rch', 'RcHm_v2.0_Chr4g0439971' => 'rch', 'RcHm_v2.0_Chr5g0008541' => 'rch', 'RcHm_v2.0_Chr5g0014101' => 'rch', 'RcHm_v2.0_Chr5g0014131' => 'rch', 'RcHm_v2.0_Chr5g0033621' => 'rch', 'RcHm_v2.0_Chr6g0272041' => 'rch', 'RcHm_v2.0_Chr6g0278831' => 'rch', 'Rhsim02G0130400' => 'rsi', 'Rhsim02G0171100' => 'rsi', 'Rhsim05G0053000' => 'rsi', 'Rhsim05G0053100' => 'rsi', 'Rhsim06G0096500' => 'rsi', 'Rhsim06G0096600' => 'rsi', 'Rhsim06G0199100' => 'rsi', 'Rhsim12G0062300' => 'rsi', 'Rhsim12G0062800' => 'rsi', 'Sabra02G0118600' => 'sbr', 'Sabra04G0027300' => 'sbr', 'Sabra04G0119500' => 'sbr', 'Sabra08G0112500' => 'sbr', 'Sabra11G0036800' => 'sbr', 'Sabra11G0103800' => 'sbr', 'Sabra13G0096300' => 'sbr', 'Sabra16G0262300' => 'sbr', 'Sabra18G0091700' => 'sbr', 'Sabra19G0095400' => 'sbr', 'SalBow6G3080' => 'sbo', 'SalBow7G1157' => 'sbo', 'SalBow7G2123' => 'sbo', 'SalBow7G2285' => 'sbo', 'SalBow7G3537' => 'sbo', 'SalBow8G2947' => 'sbo', 'SalBow8G4463' => 'sbo', 'SalBow8G5466' => 'sbo', 'Sc01g0001750' => 'sci', 'Sc02g0006640' => 'sci', 'Sc02g0006670' => 'sci', 'Sc04g0008220' => 'sci', 'Sc05g0006190' => 'sci', 'Sc08g0002760' => 'sci', 'Sc17g0006170' => 'sci', 'Sc22g0002050' => 'sci', 'Sc23g0001190' => 'sci', 'Sc24g0000980' => 'sci', 'Sed0006245' => 'sed', 'Sed0007543' => 'sed', 'Sed0009411' => 'sed', 'Sed0010765' => 'sed', 'Sed0012944' => 'sed', 'Sed0014682' => 'sed', 'Sed0016174' => 'sed', 'Sed0016796' => 'sed', 'Sed0020317' => 'sed', 'Sed0021467' => 'sed', 'SEGI_01316' => 'sgi', 'SEGI_03374' => 'sgi', 'SEGI_16265' => 'sgi', 'SEGI_18569' => 'sgi', 'SEGI_20351' => 'sgi', 'SEGI_26395' => 'sgi', 'SEGI_29469' => 'sgi', 'SEGI_34771' => 'sgi', 'SEGI_36769' => 'sgi', 'SEGI_37139' => 'sgi', 'SGA_v2.0_scaffold100G29687' => 'sas', 'SGA_v2.0_scaffold118G32472' => 'sas', 'SGA_v2.0_scaffold14G07051' => 'sas', 'SGA_v2.0_scaffold183G39845' => 'sas', 'SGA_v2.0_scaffold1G00174' => 'sas', 'SGA_v2.0_scaffold22G09714' => 'sas', 'SGA_v2.0_scaffold333G48992' => 'sas', 'SGA_v2.0_scaffold46G17491' => 'sas', 'SGA_v2.0_scaffold49G18294' => 'sas', 'SGA_v2.0_scaffold63G21658' => 'sas', 'SHI01741' => 'shi', 'SHI05771' => 'shi', 'SHI18077' => 'shi', 'SHI20525' => 'shi', 'SHI20527' => 'shi', 'SHI20528' => 'shi', 'SMO172G0185' => 'smo', 'SMO198G0020' => 'smo', 'SMO351G0006' => 'smo', 'SMO356G0118' => 'smo', 'SMO358G0296' => 'smo', 'SMO367G0079' => 'smo', 'SMO367G1277' => 'smo', 'Solyc01g014220.3' => 'sly', 'Solyc01g111770.2' => 'sly', 'Solyc02g078180.3' => 'sly', 'Solyc03g006430.3' => 'sly', 'Solyc03g006456.1' => 'sly', 'Solyc03g079860.2' => 'sly', 'Solyc04g079770.3' => 'sly', 'Solyc05g007430.4' => 'sly', 'Solyc07g063150.3' => 'sly', 'Solyc08g016620.3' => 'sly', 'Solyc09g057590.3' => 'sly', 'Solyc09g057600.1' => 'sly', 'Solyc10g009050.3' => 'sly', 'Solyc11g017420.2' => 'sly', 'Sopen01g053810' => 'spe', 'Sopen02g023040' => 'spe', 'Sopen03g002440' => 'spe', 'Sopen04g033350' => 'spe', 'Sopen05g003310' => 'spe', 'Sopen07g004050' => 'spe', 'Sopen07g031340' => 'spe', 'Sopen08g006990' => 'spe', 'Sopen10g004830' => 'spe', 'Sopen11g009370' => 'spe', 'Sp1g24450' => 'spa', 'Sp1g29670' => 'spa', 'Sp1g39600' => 'spa', 'Sp2g11080' => 'spa', 'Sp2g13970' => 'spa', 'Sp4g16130' => 'spa', 'Sp6g13080' => 'spa', 'Sp7g37270' => 'spa', 'TAR371G0065' => 'tar', 'TAR376G0340' => 'tar', 'TAR376G0435' => 'tar', 'TAR381G0002' => 'tar', 'TAR381G1236' => 'tar', 'TAR624G0055' => 'tar', 'TAR624G0324' => 'tar', 'TAR624G0696' => 'tar', 'TAR624G0906' => 'tar', 'TAR625G0107' => 'tar', 'TAR626G0015' => 'tar', 'TAR626G1356' => 'tar', 'TAR627G0888' => 'tar', 'TAR628G0399' => 'tar', 'TAR628G1327' => 'tar', 'TAR629G2831' => 'tar', 'TAR629G2874' => 'tar', 'TAR633G1432' => 'tar', 'TAR633G2771' => 'tar', 'THA.LOC104803394' => 'tha', 'THA.LOC104805153' => 'tha', 'THA.LOC104806784' => 'tha', 'THA.LOC104810473' => 'tha', 'THA.LOC104813100' => 'tha', 'THA.LOC104814215' => 'tha', 'THA.LOC104815554' => 'tha', 'THA.LOC104820544' => 'tha', 'THA.LOC104824754' => 'tha', 'THA.LOC104827717' => 'tha', 'Thecc.02G031400' => 'tca', 'Thecc.02G055900' => 'tca', 'Thecc.02G350800' => 'tca', 'Thecc.06G150900' => 'tca', 'Thecc.06G186600' => 'tca', 'Thecc.07G089600' => 'tca', 'Thecc.08G020400' => 'tca', 'Thecc.08G182100' => 'tca', 'Thhalv10000873m.g' => 'esa', 'Thhalv10004185m.g' => 'esa', 'Thhalv10006981m.g' => 'esa', 'Thhalv10007204m.g' => 'esa', 'Thhalv10011374m.g' => 'esa', 'Thhalv10013482m.g' => 'esa', 'Thhalv10017801m.g' => 'esa', 'Thhalv10024983m.g' => 'esa', 'TPR.G12072' => 'tpr', 'TPR.G15769' => 'tpr', 'TPR.G16504' => 'tpr', 'TPR.G16506' => 'tpr', 'TPR.G24345' => 'tpr', 'TPR.G26666' => 'tpr', 'TPR.G27320' => 'tpr', 'TPR.G31819' => 'tpr', 'TPR.G38879' => 'tpr', 'TPR.G39015' => 'tpr', 'TPR.G8819' => 'tpr', 'TWI09G0924' => 'twi', 'TWI12G0811' => 'twi', 'TWI12G1294' => 'twi', 'TWI31G0150' => 'twi', 'TWI36G1262' => 'twi', 'TWI38G1287' => 'twi', 'TWI38G1633' => 'twi', 'TWI38G1982' => 'twi', 'TWI39G0116' => 'twi', 'TWI60G1011' => 'twi', 'TWI63G0171' => 'twi', 'TWI73G0839' => 'twi', 'TWI79G1511' => 'twi', 'unitig_0.g915' => 'ugi', 'unitig_0.g916' => 'ugi', 'unitig_21.g20219' => 'ugi', 'unitig_21.g20416' => 'ugi', 'unitig_578.g16132' => 'ugi', 'unitig_578.g16718' => 'ugi', 'unitig_62.g23481' => 'ugi', 'unitig_744.g24535' => 'ugi', 'unitig_749.g13525' => 'ugi', 'vmacro01248' => 'vma', 'vmacro02290' => 'vma', 'vmacro10946' => 'vma', 'vmacro11865' => 'vma', 'vmacro12493' => 'vma', 'vmacro17322' => 'vma', 'vmacro21599' => 'vma', 'vmacro23041' => 'vma', 'VMungo0251G0004' => 'vmu', 'VMungo0251G2639' => 'vmu', 'VMungo0251G2967' => 'vmu', 'VMungo0540G0864' => 'vmu', 'VMungo0540G1569' => 'vmu', 'VMungo0647G0317' => 'vmu', 'VMungo0720G1373' => 'vmu', 'VMungo0720G1508' => 'vmu', 'VMungo1080G0485' => 'vmu', 'VMungo1215G3177' => 'vmu', 'Zm00001eb112600' => 'zma', 'Zm00001eb120220' => 'zma', 'Zm00001eb153240' => 'zma', 'Zm00001eb168880' => 'zma', 'Zm00001eb213920' => 'zma', 'Zm00001eb228280' => 'zma', 'Zm00001eb254580' => 'zma', 'Zm00001eb272180' => 'zma', 'Zm00001eb293190' => 'zma', 'Zm00001eb322930' => 'zma', 'Zm00001eb353360' => 'zma', 'Zm00001eb353390' => 'zma', 'Zm00001eb353430' => 'zma', 'Zm00001eb353440' => 'zma', 'Zm00001eb353780' => 'zma' ) $gf_id = 'HOM05D000499' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000499' ) $data_identifier = 'HOM05D000499' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 29, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 12, 'amhyb' => (int) 8, 'aly' => (int) 12, 'aox' => (int) 9, 'arhy' => (int) 26, 'ath' => (int) 8, 'atr' => (int) 7, 'acertr' => (int) 10, 'cqu' => (int) 15, 'bca' => (int) 29, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 11, 'cansat' => (int) 8, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 9, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 8, 'cpa' => (int) 10, 'csa' => (int) 7, 'camsi' => (int) 20, 'dca' => (int) 8, 'din' => (int) 12, 'dzi' => (int) 14, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 6, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 38, 'gra' => (int) 16, 'vvi' => (int) 8, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 5, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 11, 'lja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 11, 'mpo' => (int) 3, 'mbi' => (int) 14, 'mdo' => (int) 14, 'mtr' => (int) 8, 'cme' => (int) 9, 'egut' => (int) 9, 'ama' => (int) 11, 'nta' => (int) 17, 'nnu' => (int) 11, 'oeu' => (int) 18, 'osa' => (int) 8, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 6, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 9, 'rsi' => (int) 9, 'sbr' => (int) 10, 'sbo' => (int) 8, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 10, 'sas' => (int) 10, 'shi' => (int) 6, 'smo' => (int) 7, 'sly' => (int) 14, 'spe' => (int) 10, 'spa' => (int) 8, 'tar' => (int) 19, 'tha' => (int) 10, 'tca' => (int) 8, 'esa' => (int) 8, 'tpr' => (int) 11, 'twi' => (int) 13, 'ugi' => (int) 9, 'vma' => (int) 8, 'vmu' => (int) 10, 'zma' => (int) 15 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb353780' $species_info = array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ) $local_species = 'pso' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000499', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1066', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p29780' => 'bna', 'A02p33180' => 'bna', 'A03p16470' => 'bna', 'A03p66010' => 'bna', 'A04p25970' => 'bna', 'A06p01270' => 'bna', 'A06p46080' => 'bna', 'A07p11400' => 'bna', 'A08p01840' => 'bna', 'A08p08230' => 'bna', 'A08p25740' => 'bna', 'A09p32070' => 'bna', 'A09p37830' => 'bna', 'A09p42840' => 'bna', 'A09p42850' => 'bna', 'Aa31LG10G2060' => 'aar', 'Aa31LG2G7410' => 'aar', 'Aa31LG6G10200' => 'aar', 'Aa31LG6G16680' => 'aar', 'Aa31LG6G8470' => 'aar', 'Aa31LG9G12730' => 'aar', 'Aa31LG9G13680' => 'aar', 'Aa31LG9G14920' => 'aar', 'Aa31LG9G6650' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4977' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5467' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3254' => 'aag', 'Actinidia02578' => 'ach', 'Actinidia07693' => 'ach', 'Actinidia08413' => 'ach', 'Actinidia08414' => 'ach', 'Actinidia15289' => 'ach', 'Actinidia19871' => 'ach', 'Actinidia21475' => 'ach', 'Actinidia22576' => 'ach', 'Actinidia28327' => 'ach', 'Actinidia32491' => 'ach', 'Actinidia39463' => 'ach', 'Actinidia39571' => 'ach', 'Ah.01g013750' => 'amhyb', 'Ah.01g023210' => 'amhyb', 'Ah.04g164850' => 'amhyb', 'Ah.05g178060' => 'amhyb', 'Ah.07g204270' => 'amhyb', 'Ah.07g208480' => 'amhyb', 'Ah.09g237410' => 'amhyb', 'Ah.14g089460' => 'amhyb', 'AL1G41790' => 'aly', 'AL1G49050' => 'aly', 'AL1G53810' => 'aly', 'AL1G61400' => 'aly', 'AL4G18580' => 'aly', 'AL5G12510' => 'aly', 'AL5G12540' => 'aly', 'AL6G43230' => 'aly', 'AL7G10370' => 'aly', 'AL7G19250' => 'aly', 'AL8G12240' => 'aly', 'AL8G18540' => 'aly', 'Aqoxy1G02409' => 'aox', 'Aqoxy2G03993' => 'aox', 'Aqoxy3G03357' => 'aox', 'Aqoxy4G00785' => 'aox', 'Aqoxy5G02598' => 'aox', 'Aqoxy6G00132' => 'aox', 'Aqoxy7G01776' => 'aox', 'Aqoxy7G02316' => 'aox', 'Aqoxy7G03973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.12AFKW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B8730' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27IQR1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3F75VG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3RE0GA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41TCQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.527VTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FIR39' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5W8UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DA38EV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ63HS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H1I32C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HC27T5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4M8AP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7N3CZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9UVDZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LS1NQA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT1D4B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SKC4TM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCFV76' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF9Q1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQWD9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1ZM88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WE07RT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YCK7VH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJE6Q6' => 'arhy', 'AT1G28240' => 'ath', 'AT1G34550' => 'ath', 'AT1G53040' => 'ath', 'AT2G02910' => 'ath', 'AT4G09630' => 'ath', 'AT4G38500' => 'ath', 'AT5G42660' => 'ath', 'AT5G46220' => 'ath', 'ATR0152G026' => 'atr', 'ATR0564G343' => 'atr', 'ATR0706G151' => 'atr', 'ATR0733G207' => 'atr', 'ATR0751G234' => 'atr', 'ATR0807G048' => 'atr', 'ATR1091G084' => 'atr', 'Atru.chr10.1229' => 'acertr', 'Atru.chr10.1230' => 'acertr', 'Atru.chr10.1874' => 'acertr', 'Atru.chr11.1808' => 'acertr', 'Atru.chr13.1795' => 'acertr', 'Atru.chr13.570' => 'acertr', 'Atru.chr2.2608' => 'acertr', 'Atru.chr2.2609' => 'acertr', 'Atru.chr5.3428' => 'acertr', 'Atru.chr8.1171' => 'acertr', 'AUR62004651' => 'cqu', 'AUR62008675' => 'cqu', 'AUR62010014' => 'cqu', 'AUR62013004' => 'cqu', 'AUR62014825' => 'cqu', 'AUR62015015' => 'cqu', 'AUR62015151' => 'cqu', 'AUR62017020' => 'cqu', 'AUR62019422' => 'cqu', 'AUR62023570' => 'cqu', 'AUR62025571' => 'cqu', 'AUR62029098' => 'cqu', 'AUR62033863' => 'cqu', 'AUR62034296' => 'cqu', 'AUR62040075' => 'cqu', 'BcaB02g07334' => 'bca', 'BcaB02g10575' => 'bca', 'BcaB03g12119' => 'bca', 'BcaB03g12120' => 'bca', 'BcaB03g13945' => 'bca', 'BcaB04g17123' => 'bca', 'BcaB04g17867' => 'bca', 'BcaB04g19839' => 'bca', 'BcaB07g30317' => 'bca', 'BcaB07g32432' => 'bca', 'BcaB07g33362' => 'bca', 'BcaB08g36611' => 'bca', 'BcaC01g00028' => 'bca', 'BcaC01g01356' => 'bca', 'BcaC01g02034' => 'bca', 'BcaC01g06051' => 'bca', 'BcaC03g16839' => 'bca', 'BcaC03g17176' => 'bca', 'BcaC05g26829' => 'bca', 'BcaC06g31490' => 'bca', 'BcaC06g35344' => 'bca', 'BcaC06g36570' => 'bca', 'BcaC07g37537' => 'bca', 'BcaC08g43491' => 'bca', 'BcaC08g43773' => 'bca', 'BcaNung00234' => 'bca', 'BcaNung01982' => 'bca', 'BcaNung03707' => 'bca', 'BcaNung06454' => 'bca', 'BolC2t10762H' => 'bol', 'BolC2t11191H' => 'bol', 'BolC3t14322H' => 'bol', 'BolC3t19747H' => 'bol', 'BolC3t21425H' => 'bol', 'BolC4t27800H' => 'bol', 'BolC5t31423H' => 'bol', 'BolC6t35951H' => 'bol', 'BolC6t36282H' => 'bol', 'BolC7t40678H' => 'bol', 'BolC7t40679H' => 'bol', 'BolC7t42222H' => 'bol', 'BolC7t43492H' => 'bol', 'BolC7t46785H' => 'bol', 'BolC8t47853H' => 'bol', 'BolC9t56805H' => 'bol', 'BraA02t08000Z' => 'bra', 'BraA02t08341Z' => 'bra', 'BraA03t10936Z' => 'bra', 'BraA03t15657Z' => 'bra', 'BraA04t18100Z' => 'bra', 'BraA05t20523Z' => 'bra', 'BraA06t23353Z' => 'bra', 'BraA06t27473Z' => 'bra', 'BraA06t27769Z' => 'bra', 'BraA07t28928Z' => 'bra', 'BraA08t32236Z' => 'bra', 'BraA08t32841Z' => 'bra', 'BraA08t34524Z' => 'bra', 'BraA09t38742Z' => 'bra', 'BraA09t39295Z' => 'bra', 'C02p47180' => 'bna', 'C02p50990' => 'bna', 'C03p19360' => 'bna', 'C03p74950' => 'bna', 'C03p91000' => 'bna', 'C04p63260' => 'bna', 'C05p27050' => 'bna', 'C06p08750' => 'bna', 'C06p11490' => 'bna', 'C07p02820' => 'bna', 'C07p17180' => 'bna', 'C07p29440' => 'bna', 'C07p63730' => 'bna', 'C09p39260' => 'bna', 'CAN.G1164.34' => 'can', 'CAN.G1164.39' => 'can', 'CAN.G1530.3' => 'can', 'CAN.G162.61' => 'can', 'CAN.G176.6' => 'can', 'CAN.G289.49' => 'can', 'CAN.G370.21' => 'can', 'CAN.G370.22' => 'can', 'CAN.G371.117' => 'can', 'CAN.G58.37' => 'can', 'CAN.G588.98' => 'can', 'CANSAT21G2266' => 'cansat', 'CANSAT25G2799' => 'cansat', 'CANSAT35G0862' => 'cansat', 'CANSAT35G1704' => 'cansat', 'CANSAT35G1760' => 'cansat', 'CANSAT56G3971' => 'cansat', 'CANSAT56G4116' => 'cansat', 'CANSAT80G1259' => 'cansat', 'CARHR027730' => 'chi', 'CARHR033880' => 'chi', 'CARHR043270' => 'chi', 'CARHR145330' => 'chi', 'CARHR145340' => 'chi', 'CARHR175570' => 'chi', 'CARHR181570' => 'chi', 'CARHR258470' => 'chi', 'CARHR260490' => 'chi', 'CARHR294220' => 'chi', 'Carub.0001s2668' => 'cru', 'Carub.0001s3257' => 'cru', 'Carub.0001s4220' => 'cru', 'Carub.0005s0179' => 'cru', 'Carub.0006s2807' => 'cru', 'Carub.0007s0039' => 'cru', 'Carub.0008s0169' => 'cru', 'Carub.0008s0636' => 'cru', 'Ca_00338_v3' => 'car', 'Ca_00542_v3' => 'car', 'Ca_01844_v3' => 'car', 'Ca_10611_v3' => 'car', 'Ca_13326_v3' => 'car', 'Ca_17944_v3' => 'car', 'Ca_18546_v3' => 'car', 'Ca_24219_v3' => 'car', 'Ca_29972_v3' => 'car', 'CBR_g3681' => 'cbr', 'CBR_g40021' => 'cbr', 'Cc01_g08140' => 'ccan', 'Cc02_g13410' => 'ccan', 'Cc02_g37480' => 'ccan', 'Cc05_g12030' => 'ccan', 'Cc09_g03370' => 'ccan', 'Cc09_g10300' => 'ccan', 'Cc10_g03530' => 'ccan', 'Cc10_g11380' => 'ccan', 'CDE01G0176' => 'cde', 'CDE02G0675' => 'cde', 'CDE02G0942' => 'cde', 'CDE02G1153' => 'cde', 'CDE02G4177' => 'cde', 'CDE04G2117' => 'cde', 'CDE04G2736' => 'cde', 'CDE08G1161' => 'cde', 'CDE09G1238' => 'cde', 'Cfa000467' => 'cfa', 'Cfa000947' => 'cfa', 'Cfa004969' => 'cfa', 'Cfa005284' => 'cfa', 'Cfa008993' => 'cfa', 'Cfa018187' => 'cfa', 'Cfa018454' => 'cfa', 'Cfa020585' => 'cfa', 'Ciclev10000424m.g' => 'ccl', 'Ciclev10003605m.g' => 'ccl', 'Ciclev10007828m.g' => 'ccl', 'Ciclev10014620m.g' => 'ccl', 'Ciclev10015169m.g' => 'ccl', 'Ciclev10018291m.g' => 'ccl', 'Ciclev10028256m.g' => 'ccl', 'Ciclev10033822m.g' => 'ccl', 'CiPaw.05G060300' => 'cil', 'CiPaw.05G085000' => 'cil', 'CiPaw.06G083700' => 'cil', 'CiPaw.06G120300' => 'cil', 'CiPaw.09G060500' => 'cil', 'CiPaw.09G123800' => 'cil', 'CiPaw.11G169700' => 'cil', 'CiPaw.12G118300' => 'cil', 'CiPaw.15G071000' => 'cil', 'CiPaw.15G081900' => 'cil', 'ClCG01G024610' => 'cla', 'ClCG03G006070' => 'cla', 'ClCG05G019250' => 'cla', 'ClCG09G009500' => 'cla', 'ClCG11G008200' => 'cla', 'ClCG11G018080' => 'cla', 'COL.COLO4_17373' => 'col', 'COL.COLO4_22994' => 'col', 'COL.COLO4_26389' => 'col', 'COL.COLO4_27170' => 'col', 'COL.COLO4_31074' => 'col', 'COL.COLO4_31465' => 'col', 'COL.COLO4_36438' => 'col', 'COL.COLO4_36439' => 'col', 'Cpa.g.c38781' => 'cpa', 'Cpa.g.sc128.12' => 'cpa', 'Cpa.g.sc166.7' => 'cpa', 'Cpa.g.sc166.8' => 'cpa', 'Cpa.g.sc20.111' => 'cpa', 'Cpa.g.sc27.31' => 'cpa', 'Cpa.g.sc64.36' => 'cpa', 'Cpa.g.sc64.37' => 'cpa', 'Cpa.g.sc66.49' => 'cpa', 'Cpa.g.sc80.64' => 'cpa', 'CsaV3_1G012320' => 'csa', 'CsaV3_2G008480' => 'csa', 'CsaV3_2G033450' => 'csa', 'CsaV3_3G044830' => 'csa', 'CsaV3_4G033710' => 'csa', 'CsaV3_6G051730' => 'csa', 'CsaV3_7G025350' => 'csa', 'CSS0001067' => 'camsi', 'CSS0005996' => 'camsi', 'CSS0006590' => 'camsi', 'CSS0009673' => 'camsi', 'CSS0010201' => 'camsi', 'CSS0010549' => 'camsi', 'CSS0011364' => 'camsi', 'CSS0014473' => 'camsi', 'CSS0014961' => 'camsi', 'CSS0020191' => 'camsi', 'CSS0021165' => 'camsi', 'CSS0022306' => 'camsi', 'CSS0030591' => 'camsi', 'CSS0030696' => 'camsi', 'CSS0032653' => 'camsi', 'CSS0037487' => 'camsi', 'CSS0041102' => 'camsi', 'CSS0041261' => 'camsi', 'CSS0046246' => 'camsi', 'CSS0049256' => 'camsi', 'DCAR_004075' => 'dca', 'DCAR_011538' => 'dca', 'DCAR_019553' => 'dca', 'DCAR_020952' => 'dca', 'DCAR_021739' => 'dca', 'DCAR_027407' => 'dca', 'DCAR_027913' => 'dca', 'DCAR_028066' => 'dca', 'Dinv05899' => 'din', 'Dinv07563' => 'din', 'Dinv08010' => 'din', 'Dinv14125' => 'din', 'Dinv20172' => 'din', 'Dinv30743' => 'din', 'Dinv31229' => 'din', 'Dinv34162' => 'din', 'Dinv36028' => 'din', 'Dinv39368' => 'din', 'Dinv40565' => 'din', 'Dinv41706' => 'din', 'Duzib052G0089' => 'dzi', 'Duzib116G0641' => 'dzi', 'Duzib132G0069' => 'dzi', 'Duzib132G1219' => 'dzi', 'Duzib147G0278' => 'dzi', 'Duzib160G0480' => 'dzi', 'Duzib170G0661' => 'dzi', 'Duzib177G0591' => 'dzi', 'Duzib187G1353' => 'dzi', 'Duzib192G0858' => 'dzi', 'Duzib192G0883' => 'dzi', 'Duzib213G0506' => 'dzi', 'Duzib235G0289' => 'dzi', 'Duzib251G0422' => 'dzi', 'ECA232G3898' => 'eca', 'ECA233G5950' => 'eca', 'ECA234G1699' => 'eca', 'ECA234G2421' => 'eca', 'ECA236G0426' => 'eca', 'ECA236G4331' => 'eca', 'ECA248G2573' => 'eca', 'EL10Ac1g00077' => 'bvu', 'EL10Ac1g01746' => 'bvu', 'EL10Ac2g03464' => 'bvu', 'EL10Ac4g08176' => 'bvu', 'EL10Ac7g17521' => 'bvu', 'EL10Ac8g20386' => 'bvu', 'EL10Ac9g21343' => 'bvu', 'EL10Ac9g22688' => 'bvu', 'Eucgr.B03434' => 'egr', 'Eucgr.D00618' => 'egr', 'Eucgr.E02395' => 'egr', 'Eucgr.F01129' => 'egr', 'Eucgr.F02622' => 'egr', 'Eucgr.F04207' => 'egr', 'FAN01G0570' => 'fan', 'FAN03G3351' => 'fan', 'FAN06G3702' => 'fan', 'FAN07G2149' => 'fan', 'FAN10G3758' => 'fan', 'FAN11G1170' => 'fan', 'FAN11G2050' => 'fan', 'FAN11G2724' => 'fan', 'FAN12G1700' => 'fan', 'FAN12G2028' => 'fan', 'FAN15G1160' => 'fan', 'FAN15G3063' => 'fan', 'FAN16G2540' => 'fan', 'FAN16G3077' => 'fan', 'FAN16G3624' => 'fan', 'FAN17G0221' => 'fan', 'FAN20G2492' => 'fan', 'FAN20G2905' => 'fan', 'FAN21G0548' => 'fan', 'FAN21G1300' => 'fan', 'FAN22G0077' => 'fan', 'FAN22G1315' => 'fan', 'FAN24G1280' => 'fan', 'FAN24G1445' => 'fan', 'FAN24G3527' => 'fan', 'FAN25G0464' => 'fan', 'FAN25G2885' => 'fan', 'FAN25G3270' => 'fan', 'FAN27G1101' => 'fan', 'FAN27G2846' => 'fan', 'FAN27G3524' => 'fan', 'FvH4_2g11770' => 'fve', 'FvH4_2g15630' => 'fve', 'FvH4_3g05570' => 'fve', 'FvH4_3g09110' => 'fve', 'FvH4_3g19940' => 'fve', 'FvH4_4g04821' => 'fve', 'FvH4_4g31480' => 'fve', 'FvH4_7g01740' => 'fve', 'Glyma.05G130400' => 'gma', 'Glyma.05G156400' => 'gma', 'Glyma.07G197000' => 'gma', 'Glyma.08G085151' => 'gma', 'Glyma.08G114500' => 'gma', 'Glyma.08G300400' => 'gma', 'Glyma.10G215800' => 'gma', 'Glyma.12G224400' => 'gma', 'Glyma.13G179300' => 'gma', 'Glyma.13G218151' => 'gma', 'Glyma.13G238800' => 'gma', 'Glyma.13G276900' => 'gma', 'Glyma.14G078200' => 'gma', 'Glyma.15G074500' => 'gma', 'Glyma.15G094100' => 'gma', 'Glyma.17G247200' => 'gma', 'Glyma.18G120100' => 'gma', 'Glyma.20G176000' => 'gma', 'Gohir.A01G063600' => 'ghi', 'Gohir.A01G170301' => 'ghi', 'Gohir.A02G060500' => 'ghi', 'Gohir.A05G133850' => 'ghi', 'Gohir.A05G161400' => 'ghi', 'Gohir.A06G012900' => 'ghi', 'Gohir.A06G035901' => 'ghi', 'Gohir.A06G127100' => 'ghi', 'Gohir.A06G210500' => 'ghi', 'Gohir.A08G008650' => 'ghi', 'Gohir.A09G072700' => 'ghi', 'Gohir.A09G088301' => 'ghi', 'Gohir.A10G040600' => 'ghi', 'Gohir.A12G036300' => 'ghi', 'Gohir.A12G143350' => 'ghi', 'Gohir.A12G165500' => 'ghi', 'Gohir.A13G145700' => 'ghi', 'Gohir.D01G050000' => 'ghi', 'Gohir.D01G051366' => 'ghi', 'Gohir.D01G161350' => 'ghi', 'Gohir.D02G065900' => 'ghi', 'Gohir.D05G164200' => 'ghi', 'Gohir.D05G355500' => 'ghi', 'Gohir.D06G010400' => 'ghi', 'Gohir.D06G111250' => 'ghi', 'Gohir.D06G132000' => 'ghi', 'Gohir.D06G210500' => 'ghi', 'Gohir.D07G165675' => 'ghi', 'Gohir.D08G062240' => 'ghi', 'Gohir.D08G086101' => 'ghi', 'Gohir.D08G138060' => 'ghi', 'Gohir.D09G072300' => 'ghi', 'Gohir.D10G041400' => 'ghi', 'Gohir.D11G191020' => 'ghi', 'Gohir.D11G212066' => 'ghi', 'Gohir.D12G036300' => 'ghi', 'Gohir.D12G168600' => 'ghi', 'Gohir.D13G150600' => 'ghi', 'Gorai.001G057300' => 'gra', 'Gorai.002G069900' => 'gra', 'Gorai.002G200000' => 'gra', 'Gorai.003G067600' => 'gra', 'Gorai.005G074800' => 'gra', 'Gorai.006G087300' => 'gra', 'Gorai.008G037500' => 'gra', 'Gorai.008G181400' => 'gra', 'Gorai.009G169400' => 'gra', 'Gorai.009G387900' => 'gra', 'Gorai.010G013300' => 'gra', 'Gorai.010G153800' => 'gra', 'Gorai.010G255800' => 'gra', 'Gorai.011G043700' => 'gra', 'Gorai.011G198900' => 'gra', 'Gorai.013G168400' => 'gra', 'GSVIVG01005212001' => 'vvi', 'GSVIVG01006163001' => 'vvi', 'GSVIVG01009625001' => 'vvi', 'GSVIVG01014338001' => 'vvi', 'GSVIVG01020005001' => 'vvi', 'GSVIVG01021450001' => 'vvi', 'GSVIVG01023975001' => 'vvi', 'GSVIVG01034490001' => 'vvi', 'HanXRQChr04g0112071' => 'han', 'HanXRQChr05g0131151' => 'han', 'HanXRQChr09g0262371' => 'han', 'HanXRQChr09g0268401' => 'han', 'HanXRQChr10g0279241' => 'han', 'HanXRQChr10g0297961' => 'han', 'HanXRQChr11g0326231' => 'han', 'HanXRQChr11g0328471' => 'han', 'HanXRQChr16g0507941' => 'han', 'HanXRQChr17g0560211' => 'han', 'Haze_02108' => 'cav', 'Haze_02428' => 'cav', 'Haze_05593' => 'cav', 'Haze_06448' => 'cav', 'Haze_09427' => 'cav', 'Haze_12022' => 'cav', 'Haze_17612' => 'cav', 'Haze_17928' => 'cav', 'Hma1.2p1_0032F.1_g019250' => 'hma', 'Hma1.2p1_0163F.1_g072690' => 'hma', 'Hma1.2p1_0265F.1_g106710' => 'hma', 'Hma1.2p1_0286F.1_g113970' => 'hma', 'Hma1.2p1_0363F.1_g136640' => 'hma', 'Hma1.2p1_0584F.1_g183470' => 'hma', 'Hma1.2p1_0885F.1_g232570' => 'hma', 'HPP92_006022' => 'vpl', 'HPP92_007320' => 'vpl', 'HPP92_011521' => 'vpl', 'HPP92_019387' => 'vpl', 'HPP92_024038' => 'vpl', 'Hund05891' => 'sun', 'Hund06450' => 'sun', 'Hund12053' => 'sun', 'Hund16800' => 'sun', 'Hund21222' => 'sun', 'Hund22896' => 'sun', 'Hund23746' => 'sun', 'Hund27083' => 'sun', 'Lalb_Chr02g0141831' => 'lal', 'Lalb_Chr02g0141841' => 'lal', 'Lalb_Chr05g0220411' => 'lal', 'Lalb_Chr06g0162081' => 'lal', 'Lalb_Chr09g0327651' => 'lal', 'Lalb_Chr13g0295051' => 'lal', 'Lalb_Chr15g0086801' => 'lal', 'Lalb_Chr16g0383781' => 'lal', 'Lalb_Chr16g0383791' => 'lal', 'Lalb_Chr18g0055441' => 'lal', 'Lalb_Chr18g0059611' => 'lal', 'Lalb_Chr20g0109661' => 'lal', 'Lalb_Chr20g0109831' => 'lal', 'Lalb_Chr20g0121871' => 'lal', 'Lalb_Chr22g0355361' => 'lal', 'Lalb_Chr25g0286371' => 'lal', 'Lj1A1187G43' => 'lonja', 'Lj1A1205T50' => 'lonja', 'Lj1A800G33' => 'lonja', 'Lj1C1187T7' => 'lonja', 'Lj1C843T11' => 'lonja', 'Lj1g0010940' => 'lja', 'Lj2A288T69' => 'lonja', 'Lj3g0024276' => 'lja', 'Lj4A47T76' => 'lonja', 'Lj4g0005805' => 'lja', 'Lj4g0006097' => 'lja', 'Lj4g0008528' => 'lja', 'Lj4g0024907' => 'lja', 'Lj5g0012472' => 'lja', 'Lj5g0018648' => 'lja', 'Lj6C789G1' => 'lonja', 'Lj6g0004000' => 'lja', 'Lj7A292G67' => 'lonja', 'Lj7A292T64' => 'lonja', 'Lj9A400T58' => 'lonja', 'Lsat_1_v5_gn_1_126181' => 'lsa', 'Lsat_1_v5_gn_4_123041' => 'lsa', 'Lsat_1_v5_gn_4_133620' => 'lsa', 'Lsat_1_v5_gn_4_53221' => 'lsa', 'Lsat_1_v5_gn_4_71961' => 'lsa', 'Lsat_1_v5_gn_7_105241' => 'lsa', 'Lsat_1_v5_gn_7_21361' => 'lsa', 'Lsat_1_v5_gn_7_28860' => 'lsa', 'Lsat_1_v5_gn_7_31260' => 'lsa', 'Lsat_1_v5_gn_8_52801' => 'lsa', 'Manes.02G191400' => 'mes', 'Manes.03G110100' => 'mes', 'Manes.04G071100' => 'mes', 'Manes.05G100500' => 'mes', 'Manes.05G164700' => 'mes', 'Manes.15G087000' => 'mes', 'Manes.15G121500' => 'mes', 'Manes.16G028300' => 'mes', 'Manes.17G046100' => 'mes', 'Manes.17G069800' => 'mes', 'Manes.18G100500' => 'mes', 'Mapoly0002s0109' => 'mpo', 'Mapoly0024s0007' => 'mpo', 'Mapoly0089s0032' => 'mpo', 'MBI04_g42241_MAGBIO' => 'mbi', 'MBI05_g11988_MAGBIO' => 'mbi', 'MBI05_g35452_MAGBIO' => 'mbi', 'MBI07_g30179_MAGBIO' => 'mbi', 'MBI07_g35859_MAGBIO' => 'mbi', 'MBI07_g35860_MAGBIO' => 'mbi', 'MBI07_g37166_MAGBIO' => 'mbi', 'MBI08_g18172_MAGBIO' => 'mbi', 'MBI09_g08441_MAGBIO' => 'mbi', 'MBI13_g01676_MAGBIO' => 'mbi', 'MBI14_g42955_MAGBIO' => 'mbi', 'MBI16_g13161_MAGBIO' => 'mbi', 'MBI17_g27204_MAGBIO' => 'mbi', 'MBI19_g21595_MAGBIO' => 'mbi', 'MD00G1148400' => 'mdo', 'MD02G1301200' => 'mdo', 'MD03G1227800' => 'mdo', 'MD05G1041100' => 'mdo', 'MD05G1124800' => 'mdo', 'MD05G1284000' => 'mdo', 'MD05G1338800' => 'mdo', 'MD05G1338900' => 'mdo', 'MD07G1022800' => 'mdo', 'MD10G1047500' => 'mdo', 'MD10G1127500' => 'mdo', 'MD10G1262300' => 'mdo', 'MD10G1293800' => 'mdo', 'MD16G1074300' => 'mdo', 'Medtr1g021670' => 'mtr', 'Medtr1g096320' => 'mtr', 'Medtr2g013690' => 'mtr', 'Medtr2g019450' => 'mtr', 'Medtr2g085170' => 'mtr', 'Medtr4g088785' => 'mtr', 'Medtr8g055930' => 'mtr', 'Medtr8g085850' => 'mtr', 'MELO3C002605.2' => 'cme', 'MELO3C003891.2' => 'cme', 'MELO3C004012.2' => 'cme', 'MELO3C007134.2' => 'cme', 'MELO3C008118.2' => 'cme', 'MELO3C016700.2' => 'cme', 'MELO3C024127.2' => 'cme', 'MELO3C033361.2' => 'cme', 'MELO3C033362.2' => 'cme', 'Migut.C00430' => 'egut', 'Migut.C01246' => 'egut', 'Migut.E00101' => 'egut', 'Migut.H01486' => 'egut', 'Migut.H01939' => 'egut', 'Migut.K00360' => 'egut', 'Migut.M00910' => 'egut', 'Migut.M01139' => 'egut', 'Migut.N02677' => 'egut', 'MSTRG.13252' => 'ama', 'MSTRG.14701' => 'ama', 'MSTRG.1521' => 'ama', 'MSTRG.15884' => 'ama', 'MSTRG.16242' => 'ama', 'MSTRG.22285' => 'ama', 'MSTRG.22444' => 'ama', 'MSTRG.2349' => 'ama', 'MSTRG.26308' => 'ama', 'MSTRG.28296' => 'ama', 'MSTRG.9895' => 'ama', 'Nitab4.5_0000110g0060' => 'nta', 'Nitab4.5_0000420g0130' => 'nta', 'Nitab4.5_0000422g0030' => 'nta', 'Nitab4.5_0000560g0180' => 'nta', 'Nitab4.5_0000703g0100' => 'nta', 'Nitab4.5_0000786g0200' => 'nta', 'Nitab4.5_0001336g0020' => 'nta', 'Nitab4.5_0001796g0030' => 'nta', 'Nitab4.5_0003348g0060' => 'nta', 'Nitab4.5_0003698g0040' => 'nta', 'Nitab4.5_0003942g0090' => 'nta', 'Nitab4.5_0004775g0070' => 'nta', 'Nitab4.5_0004864g0030' => 'nta', 'Nitab4.5_0005615g0020' => 'nta', 'Nitab4.5_0009288g0030' => 'nta', 'Nitab4.5_0009341g0010' => 'nta', 'Nitab4.5_0009535g0010' => 'nta', 'Nn1g03995' => 'nnu', 'Nn1g04100' => 'nnu', 'Nn1g06530' => 'nnu', 'Nn3g16404' => 'nnu', 'Nn3g17212' => 'nnu', 'Nn3g20776' => 'nnu', 'Nn3g21923' => 'nnu', 'Nn5g27737' => 'nnu', 'Nn5g29461' => 'nnu', 'Nn7g38355' => 'nnu', 'Nn8g39873' => 'nnu', 'Oeu000548.2' => 'oeu', 'Oeu004672.1' => 'oeu', 'Oeu015605.2' => 'oeu', 'Oeu016092.1' => 'oeu', 'Oeu017879.3' => 'oeu', 'Oeu024910.1' => 'oeu', 'Oeu028965.1' => 'oeu', 'Oeu031269.1' => 'oeu', 'Oeu031270.1' => 'oeu', 'Oeu032535.1' => 'oeu', 'Oeu034151.1' => 'oeu', 'Oeu034152.1' => 'oeu', 'Oeu034588.2' => 'oeu', 'Oeu050846.1' => 'oeu', 'Oeu050849.2' => 'oeu', 'Oeu051063.2' => 'oeu', 'Oeu052368.1' => 'oeu', 'Oeu052370.1' => 'oeu', 'Os01g0210400' => 'osa', 'Os01g0304300' => 'osa', 'Os01g0749100' => 'osa', 'Os02g0745800' => 'osa', 'Os03g0769050' => 'osa', 'Os05g0531500' => 'osa', 'Os06g0724300' => 'osa', 'Os11g0198100' => 'osa', 'Peaxi162Scf00069g01425' => 'pax', 'Peaxi162Scf00280g00811' => 'pax', 'Peaxi162Scf00310g00615' => 'pax', 'Peaxi162Scf00362g00542' => 'pax', 'Peaxi162Scf00461g00310' => 'pax', 'Peaxi162Scf00530g00118' => 'pax', 'Peaxi162Scf00541g00057' => 'pax', 'Peaxi162Scf00661g00017' => 'pax', 'Peaxi162Scf00926g00027' => 'pax', 'Peaxi162Scf01064g00263' => 'pax', 'Peaxi162Scf01211g00135' => 'pax', 'PGR004G2336' => 'pgr', 'PGR042G0327' => 'pgr', 'PGR042G1957' => 'pgr', 'PGR042G2003' => 'pgr', 'PGR042G3929' => 'pgr', 'PGR083G1137' => 'pgr', 'PGR083G1364' => 'pgr', 'PGSC0003DMG400003381' => 'stu', 'PGSC0003DMG400003417' => 'stu', 'PGSC0003DMG400008981' => 'stu', 'PGSC0003DMG400012417' => 'stu', 'PGSC0003DMG400012823' => 'stu', 'PGSC0003DMG400016885' => 'stu', 'PGSC0003DMG400022812' => 'stu', 'PGSC0003DMG400029726' => 'stu', 'PGSC0003DMG401009243' => 'stu', 'PGSC0003DMG401031505' => 'stu', 'PGSC0003DMG402031505' => 'stu', 'Phvul.001G017600' => 'pvu', 'Phvul.002G193500' => 'pvu', 'Phvul.002G228900' => 'pvu', 'Phvul.002G236800' => 'pvu', 'Phvul.003G049500' => 'pvu', 'Phvul.005G072000' => 'pvu', 'Phvul.006G164800' => 'pvu', 'Phvul.006G185100' => 'pvu', 'Phvul.007G090000' => 'pvu', 'Potri.001G399800' => 'ptr', 'Potri.002G149900' => 'ptr', 'Potri.004G044100' => 'ptr', 'Potri.004G177600' => 'ptr', 'Potri.009G138000' => 'ptr', 'Potri.010G094000' => 'ptr', 'Potri.011G053000' => 'ptr', 'Potri.011G119300' => 'ptr', 'Potri.013G113700' => 'ptr', 'Potri.018G107800' => 'ptr', 'Potri.019G084100' => 'ptr', 'Pp3c14_23720' => 'ppa', 'Pp3c16_6340' => 'ppa', 'Pp3c23_13420' => 'ppa', 'Pp3c24_2740' => 'ppa', 'Pp3c25_860' => 'ppa', 'Pp3c8_21750' => 'ppa', 'Prupe.1G273000' => 'ppe', 'Prupe.1G273700' => 'ppe', 'Prupe.1G274100' => 'ppe', 'Prupe.2G023300' => 'ppe', 'Prupe.4G048000' => 'ppe', 'Prupe.4G080400' => 'ppe', 'Prupe.4G181200' => 'ppe', 'Prupe.8G056900' => 'ppe', 'Prupe.8G168700' => 'ppe', 'Psat1g189080' => 'psa', 'Psat1g204760' => 'psa', 'Psat4g175560' => 'psa', 'Psat4g177720' => 'psa', 'Psat5g244240' => 'psa', 'Psat6g010720' => 'psa', 'Psat6g187200' => 'psa', 'Psat7g072040' => 'psa', 'PSO017G3501' => 'pso', 'PSO063G2148' => 'pso', 'PSO063G5608' => 'pso', 'PSO210G6392' => 'pso', 'PSO541G2319' => 'pso', 'PSO541G2836' => 'pso', 'PSO541G4012' => 'pso', 'PSO541G6253' => 'pso', 'PSO675G0580' => 'pso', 'PSO675G0856' => 'pso', 'PSO675G5635' => 'pso', 'PSO675G9157' => 'pso', 'PSO832G1660' => 'pso', 'PSO832G1969' => 'pso', 'QL02p007186' => 'qlo', 'QL02p033904' => 'qlo', 'QL03p064391' => 'qlo', 'QL05p040593' => 'qlo', 'QL05p058242' => 'qlo', 'QL08p021825' => 'qlo', 'QL11p004981' => 'qlo', 'RcHm_v2.0_Chr1g0318301' => 'rch', 'RcHm_v2.0_Chr4g0418501' => 'rch', 'RcHm_v2.0_Chr4g0439971' => 'rch', 'RcHm_v2.0_Chr5g0008541' => 'rch', 'RcHm_v2.0_Chr5g0014101' => 'rch', 'RcHm_v2.0_Chr5g0014131' => 'rch', 'RcHm_v2.0_Chr5g0033621' => 'rch', 'RcHm_v2.0_Chr6g0272041' => 'rch', 'RcHm_v2.0_Chr6g0278831' => 'rch', 'Rhsim02G0130400' => 'rsi', 'Rhsim02G0171100' => 'rsi', 'Rhsim05G0053000' => 'rsi', 'Rhsim05G0053100' => 'rsi', 'Rhsim06G0096500' => 'rsi', 'Rhsim06G0096600' => 'rsi', 'Rhsim06G0199100' => 'rsi', 'Rhsim12G0062300' => 'rsi', 'Rhsim12G0062800' => 'rsi', 'Sabra02G0118600' => 'sbr', 'Sabra04G0027300' => 'sbr', 'Sabra04G0119500' => 'sbr', 'Sabra08G0112500' => 'sbr', 'Sabra11G0036800' => 'sbr', 'Sabra11G0103800' => 'sbr', 'Sabra13G0096300' => 'sbr', 'Sabra16G0262300' => 'sbr', 'Sabra18G0091700' => 'sbr', 'Sabra19G0095400' => 'sbr', 'SalBow6G3080' => 'sbo', 'SalBow7G1157' => 'sbo', 'SalBow7G2123' => 'sbo', 'SalBow7G2285' => 'sbo', 'SalBow7G3537' => 'sbo', 'SalBow8G2947' => 'sbo', 'SalBow8G4463' => 'sbo', 'SalBow8G5466' => 'sbo', 'Sc01g0001750' => 'sci', 'Sc02g0006640' => 'sci', 'Sc02g0006670' => 'sci', 'Sc04g0008220' => 'sci', 'Sc05g0006190' => 'sci', 'Sc08g0002760' => 'sci', 'Sc17g0006170' => 'sci', 'Sc22g0002050' => 'sci', 'Sc23g0001190' => 'sci', 'Sc24g0000980' => 'sci', 'Sed0006245' => 'sed', 'Sed0007543' => 'sed', 'Sed0009411' => 'sed', 'Sed0010765' => 'sed', 'Sed0012944' => 'sed', 'Sed0014682' => 'sed', 'Sed0016174' => 'sed', 'Sed0016796' => 'sed', 'Sed0020317' => 'sed', 'Sed0021467' => 'sed', 'SEGI_01316' => 'sgi', 'SEGI_03374' => 'sgi', 'SEGI_16265' => 'sgi', 'SEGI_18569' => 'sgi', 'SEGI_20351' => 'sgi', 'SEGI_26395' => 'sgi', 'SEGI_29469' => 'sgi', 'SEGI_34771' => 'sgi', 'SEGI_36769' => 'sgi', 'SEGI_37139' => 'sgi', 'SGA_v2.0_scaffold100G29687' => 'sas', 'SGA_v2.0_scaffold118G32472' => 'sas', 'SGA_v2.0_scaffold14G07051' => 'sas', 'SGA_v2.0_scaffold183G39845' => 'sas', 'SGA_v2.0_scaffold1G00174' => 'sas', 'SGA_v2.0_scaffold22G09714' => 'sas', 'SGA_v2.0_scaffold333G48992' => 'sas', 'SGA_v2.0_scaffold46G17491' => 'sas', 'SGA_v2.0_scaffold49G18294' => 'sas', 'SGA_v2.0_scaffold63G21658' => 'sas', 'SHI01741' => 'shi', 'SHI05771' => 'shi', 'SHI18077' => 'shi', 'SHI20525' => 'shi', 'SHI20527' => 'shi', 'SHI20528' => 'shi', 'SMO172G0185' => 'smo', 'SMO198G0020' => 'smo', 'SMO351G0006' => 'smo', 'SMO356G0118' => 'smo', 'SMO358G0296' => 'smo', 'SMO367G0079' => 'smo', 'SMO367G1277' => 'smo', 'Solyc01g014220.3' => 'sly', 'Solyc01g111770.2' => 'sly', 'Solyc02g078180.3' => 'sly', 'Solyc03g006430.3' => 'sly', 'Solyc03g006456.1' => 'sly', 'Solyc03g079860.2' => 'sly', 'Solyc04g079770.3' => 'sly', 'Solyc05g007430.4' => 'sly', 'Solyc07g063150.3' => 'sly', 'Solyc08g016620.3' => 'sly', 'Solyc09g057590.3' => 'sly', 'Solyc09g057600.1' => 'sly', 'Solyc10g009050.3' => 'sly', 'Solyc11g017420.2' => 'sly', 'Sopen01g053810' => 'spe', 'Sopen02g023040' => 'spe', 'Sopen03g002440' => 'spe', 'Sopen04g033350' => 'spe', 'Sopen05g003310' => 'spe', 'Sopen07g004050' => 'spe', 'Sopen07g031340' => 'spe', 'Sopen08g006990' => 'spe', 'Sopen10g004830' => 'spe', 'Sopen11g009370' => 'spe', 'Sp1g24450' => 'spa', 'Sp1g29670' => 'spa', 'Sp1g39600' => 'spa', 'Sp2g11080' => 'spa', 'Sp2g13970' => 'spa', 'Sp4g16130' => 'spa', 'Sp6g13080' => 'spa', 'Sp7g37270' => 'spa', 'TAR371G0065' => 'tar', 'TAR376G0340' => 'tar', 'TAR376G0435' => 'tar', 'TAR381G0002' => 'tar', 'TAR381G1236' => 'tar', 'TAR624G0055' => 'tar', 'TAR624G0324' => 'tar', 'TAR624G0696' => 'tar', 'TAR624G0906' => 'tar', 'TAR625G0107' => 'tar', 'TAR626G0015' => 'tar', 'TAR626G1356' => 'tar', 'TAR627G0888' => 'tar', 'TAR628G0399' => 'tar', 'TAR628G1327' => 'tar', 'TAR629G2831' => 'tar', 'TAR629G2874' => 'tar', 'TAR633G1432' => 'tar', 'TAR633G2771' => 'tar', 'THA.LOC104803394' => 'tha', 'THA.LOC104805153' => 'tha', 'THA.LOC104806784' => 'tha', 'THA.LOC104810473' => 'tha', 'THA.LOC104813100' => 'tha', 'THA.LOC104814215' => 'tha', 'THA.LOC104815554' => 'tha', 'THA.LOC104820544' => 'tha', 'THA.LOC104824754' => 'tha', 'THA.LOC104827717' => 'tha', 'Thecc.02G031400' => 'tca', 'Thecc.02G055900' => 'tca', 'Thecc.02G350800' => 'tca', 'Thecc.06G150900' => 'tca', 'Thecc.06G186600' => 'tca', 'Thecc.07G089600' => 'tca', 'Thecc.08G020400' => 'tca', 'Thecc.08G182100' => 'tca', 'Thhalv10000873m.g' => 'esa', 'Thhalv10004185m.g' => 'esa', 'Thhalv10006981m.g' => 'esa', 'Thhalv10007204m.g' => 'esa', 'Thhalv10011374m.g' => 'esa', 'Thhalv10013482m.g' => 'esa', 'Thhalv10017801m.g' => 'esa', 'Thhalv10024983m.g' => 'esa', 'TPR.G12072' => 'tpr', 'TPR.G15769' => 'tpr', 'TPR.G16504' => 'tpr', 'TPR.G16506' => 'tpr', 'TPR.G24345' => 'tpr', 'TPR.G26666' => 'tpr', 'TPR.G27320' => 'tpr', 'TPR.G31819' => 'tpr', 'TPR.G38879' => 'tpr', 'TPR.G39015' => 'tpr', 'TPR.G8819' => 'tpr', 'TWI09G0924' => 'twi', 'TWI12G0811' => 'twi', 'TWI12G1294' => 'twi', 'TWI31G0150' => 'twi', 'TWI36G1262' => 'twi', 'TWI38G1287' => 'twi', 'TWI38G1633' => 'twi', 'TWI38G1982' => 'twi', 'TWI39G0116' => 'twi', 'TWI60G1011' => 'twi', 'TWI63G0171' => 'twi', 'TWI73G0839' => 'twi', 'TWI79G1511' => 'twi', 'unitig_0.g915' => 'ugi', 'unitig_0.g916' => 'ugi', 'unitig_21.g20219' => 'ugi', 'unitig_21.g20416' => 'ugi', 'unitig_578.g16132' => 'ugi', 'unitig_578.g16718' => 'ugi', 'unitig_62.g23481' => 'ugi', 'unitig_744.g24535' => 'ugi', 'unitig_749.g13525' => 'ugi', 'vmacro01248' => 'vma', 'vmacro02290' => 'vma', 'vmacro10946' => 'vma', 'vmacro11865' => 'vma', 'vmacro12493' => 'vma', 'vmacro17322' => 'vma', 'vmacro21599' => 'vma', 'vmacro23041' => 'vma', 'VMungo0251G0004' => 'vmu', 'VMungo0251G2639' => 'vmu', 'VMungo0251G2967' => 'vmu', 'VMungo0540G0864' => 'vmu', 'VMungo0540G1569' => 'vmu', 'VMungo0647G0317' => 'vmu', 'VMungo0720G1373' => 'vmu', 'VMungo0720G1508' => 'vmu', 'VMungo1080G0485' => 'vmu', 'VMungo1215G3177' => 'vmu', 'Zm00001eb112600' => 'zma', 'Zm00001eb120220' => 'zma', 'Zm00001eb153240' => 'zma', 'Zm00001eb168880' => 'zma', 'Zm00001eb213920' => 'zma', 'Zm00001eb228280' => 'zma', 'Zm00001eb254580' => 'zma', 'Zm00001eb272180' => 'zma', 'Zm00001eb293190' => 'zma', 'Zm00001eb322930' => 'zma', 'Zm00001eb353360' => 'zma', 'Zm00001eb353390' => 'zma', 'Zm00001eb353430' => 'zma', 'Zm00001eb353440' => 'zma', 'Zm00001eb353780' => 'zma' ), 'gf_id' => 'HOM05D000499', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000499' ), 'data_identifier' => 'HOM05D000499', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000499', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1066', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p29780' => 'bna', 'A02p33180' => 'bna', 'A03p16470' => 'bna', 'A03p66010' => 'bna', 'A04p25970' => 'bna', 'A06p01270' => 'bna', 'A06p46080' => 'bna', 'A07p11400' => 'bna', 'A08p01840' => 'bna', 'A08p08230' => 'bna', 'A08p25740' => 'bna', 'A09p32070' => 'bna', 'A09p37830' => 'bna', 'A09p42840' => 'bna', 'A09p42850' => 'bna', 'Aa31LG10G2060' => 'aar', 'Aa31LG2G7410' => 'aar', 'Aa31LG6G10200' => 'aar', 'Aa31LG6G16680' => 'aar', 'Aa31LG6G8470' => 'aar', 'Aa31LG9G12730' => 'aar', 'Aa31LG9G13680' => 'aar', 'Aa31LG9G14920' => 'aar', 'Aa31LG9G6650' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4977' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5467' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3254' => 'aag', 'Actinidia02578' => 'ach', 'Actinidia07693' => 'ach', 'Actinidia08413' => 'ach', 'Actinidia08414' => 'ach', 'Actinidia15289' => 'ach', 'Actinidia19871' => 'ach', 'Actinidia21475' => 'ach', 'Actinidia22576' => 'ach', 'Actinidia28327' => 'ach', 'Actinidia32491' => 'ach', 'Actinidia39463' => 'ach', 'Actinidia39571' => 'ach', 'Ah.01g013750' => 'amhyb', 'Ah.01g023210' => 'amhyb', 'Ah.04g164850' => 'amhyb', 'Ah.05g178060' => 'amhyb', 'Ah.07g204270' => 'amhyb', 'Ah.07g208480' => 'amhyb', 'Ah.09g237410' => 'amhyb', 'Ah.14g089460' => 'amhyb', 'AL1G41790' => 'aly', 'AL1G49050' => 'aly', 'AL1G53810' => 'aly', 'AL1G61400' => 'aly', 'AL4G18580' => 'aly', 'AL5G12510' => 'aly', 'AL5G12540' => 'aly', 'AL6G43230' => 'aly', 'AL7G10370' => 'aly', 'AL7G19250' => 'aly', 'AL8G12240' => 'aly', 'AL8G18540' => 'aly', 'Aqoxy1G02409' => 'aox', 'Aqoxy2G03993' => 'aox', 'Aqoxy3G03357' => 'aox', 'Aqoxy4G00785' => 'aox', 'Aqoxy5G02598' => 'aox', 'Aqoxy6G00132' => 'aox', 'Aqoxy7G01776' => 'aox', 'Aqoxy7G02316' => 'aox', 'Aqoxy7G03973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.12AFKW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B8730' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27IQR1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3F75VG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3RE0GA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41TCQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.527VTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FIR39' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5W8UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DA38EV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ63HS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H1I32C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HC27T5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4M8AP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7N3CZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9UVDZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LS1NQA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT1D4B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SKC4TM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCFV76' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF9Q1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQWD9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1ZM88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WE07RT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YCK7VH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJE6Q6' => 'arhy', 'AT1G28240' => 'ath', 'AT1G34550' => 'ath', 'AT1G53040' => 'ath', 'AT2G02910' => 'ath', 'AT4G09630' => 'ath', 'AT4G38500' => 'ath', 'AT5G42660' => 'ath', 'AT5G46220' => 'ath', 'ATR0152G026' => 'atr', 'ATR0564G343' => 'atr', 'ATR0706G151' => 'atr', 'ATR0733G207' => 'atr', 'ATR0751G234' => 'atr', 'ATR0807G048' => 'atr', 'ATR1091G084' => 'atr', 'Atru.chr10.1229' => 'acertr', 'Atru.chr10.1230' => 'acertr', 'Atru.chr10.1874' => 'acertr', 'Atru.chr11.1808' => 'acertr', 'Atru.chr13.1795' => 'acertr', 'Atru.chr13.570' => 'acertr', 'Atru.chr2.2608' => 'acertr', 'Atru.chr2.2609' => 'acertr', 'Atru.chr5.3428' => 'acertr', 'Atru.chr8.1171' => 'acertr', 'AUR62004651' => 'cqu', 'AUR62008675' => 'cqu', 'AUR62010014' => 'cqu', 'AUR62013004' => 'cqu', 'AUR62014825' => 'cqu', 'AUR62015015' => 'cqu', 'AUR62015151' => 'cqu', 'AUR62017020' => 'cqu', 'AUR62019422' => 'cqu', 'AUR62023570' => 'cqu', 'AUR62025571' => 'cqu', 'AUR62029098' => 'cqu', 'AUR62033863' => 'cqu', 'AUR62034296' => 'cqu', 'AUR62040075' => 'cqu', 'BcaB02g07334' => 'bca', 'BcaB02g10575' => 'bca', 'BcaB03g12119' => 'bca', 'BcaB03g12120' => 'bca', 'BcaB03g13945' => 'bca', 'BcaB04g17123' => 'bca', 'BcaB04g17867' => 'bca', 'BcaB04g19839' => 'bca', 'BcaB07g30317' => 'bca', 'BcaB07g32432' => 'bca', 'BcaB07g33362' => 'bca', 'BcaB08g36611' => 'bca', 'BcaC01g00028' => 'bca', 'BcaC01g01356' => 'bca', 'BcaC01g02034' => 'bca', 'BcaC01g06051' => 'bca', 'BcaC03g16839' => 'bca', 'BcaC03g17176' => 'bca', 'BcaC05g26829' => 'bca', 'BcaC06g31490' => 'bca', 'BcaC06g35344' => 'bca', 'BcaC06g36570' => 'bca', 'BcaC07g37537' => 'bca', 'BcaC08g43491' => 'bca', 'BcaC08g43773' => 'bca', 'BcaNung00234' => 'bca', 'BcaNung01982' => 'bca', 'BcaNung03707' => 'bca', 'BcaNung06454' => 'bca', 'BolC2t10762H' => 'bol', 'BolC2t11191H' => 'bol', 'BolC3t14322H' => 'bol', 'BolC3t19747H' => 'bol', 'BolC3t21425H' => 'bol', 'BolC4t27800H' => 'bol', 'BolC5t31423H' => 'bol', 'BolC6t35951H' => 'bol', 'BolC6t36282H' => 'bol', 'BolC7t40678H' => 'bol', 'BolC7t40679H' => 'bol', 'BolC7t42222H' => 'bol', 'BolC7t43492H' => 'bol', 'BolC7t46785H' => 'bol', 'BolC8t47853H' => 'bol', 'BolC9t56805H' => 'bol', 'BraA02t08000Z' => 'bra', 'BraA02t08341Z' => 'bra', 'BraA03t10936Z' => 'bra', 'BraA03t15657Z' => 'bra', 'BraA04t18100Z' => 'bra', 'BraA05t20523Z' => 'bra', 'BraA06t23353Z' => 'bra', 'BraA06t27473Z' => 'bra', 'BraA06t27769Z' => 'bra', 'BraA07t28928Z' => 'bra', 'BraA08t32236Z' => 'bra', 'BraA08t32841Z' => 'bra', 'BraA08t34524Z' => 'bra', 'BraA09t38742Z' => 'bra', 'BraA09t39295Z' => 'bra', 'C02p47180' => 'bna', 'C02p50990' => 'bna', 'C03p19360' => 'bna', 'C03p74950' => 'bna', 'C03p91000' => 'bna', 'C04p63260' => 'bna', 'C05p27050' => 'bna', 'C06p08750' => 'bna', 'C06p11490' => 'bna', 'C07p02820' => 'bna', 'C07p17180' => 'bna', 'C07p29440' => 'bna', 'C07p63730' => 'bna', 'C09p39260' => 'bna', 'CAN.G1164.34' => 'can', 'CAN.G1164.39' => 'can', 'CAN.G1530.3' => 'can', 'CAN.G162.61' => 'can', 'CAN.G176.6' => 'can', 'CAN.G289.49' => 'can', 'CAN.G370.21' => 'can', 'CAN.G370.22' => 'can', 'CAN.G371.117' => 'can', 'CAN.G58.37' => 'can', 'CAN.G588.98' => 'can', 'CANSAT21G2266' => 'cansat', 'CANSAT25G2799' => 'cansat', 'CANSAT35G0862' => 'cansat', 'CANSAT35G1704' => 'cansat', 'CANSAT35G1760' => 'cansat', 'CANSAT56G3971' => 'cansat', 'CANSAT56G4116' => 'cansat', 'CANSAT80G1259' => 'cansat', 'CARHR027730' => 'chi', 'CARHR033880' => 'chi', 'CARHR043270' => 'chi', 'CARHR145330' => 'chi', 'CARHR145340' => 'chi', 'CARHR175570' => 'chi', 'CARHR181570' => 'chi', 'CARHR258470' => 'chi', 'CARHR260490' => 'chi', 'CARHR294220' => 'chi', 'Carub.0001s2668' => 'cru', 'Carub.0001s3257' => 'cru', 'Carub.0001s4220' => 'cru', 'Carub.0005s0179' => 'cru', 'Carub.0006s2807' => 'cru', 'Carub.0007s0039' => 'cru', 'Carub.0008s0169' => 'cru', 'Carub.0008s0636' => 'cru', 'Ca_00338_v3' => 'car', 'Ca_00542_v3' => 'car', 'Ca_01844_v3' => 'car', 'Ca_10611_v3' => 'car', 'Ca_13326_v3' => 'car', 'Ca_17944_v3' => 'car', 'Ca_18546_v3' => 'car', 'Ca_24219_v3' => 'car', 'Ca_29972_v3' => 'car', 'CBR_g3681' => 'cbr', 'CBR_g40021' => 'cbr', 'Cc01_g08140' => 'ccan', 'Cc02_g13410' => 'ccan', 'Cc02_g37480' => 'ccan', 'Cc05_g12030' => 'ccan', 'Cc09_g03370' => 'ccan', 'Cc09_g10300' => 'ccan', 'Cc10_g03530' => 'ccan', 'Cc10_g11380' => 'ccan', 'CDE01G0176' => 'cde', 'CDE02G0675' => 'cde', 'CDE02G0942' => 'cde', 'CDE02G1153' => 'cde', 'CDE02G4177' => 'cde', 'CDE04G2117' => 'cde', 'CDE04G2736' => 'cde', 'CDE08G1161' => 'cde', 'CDE09G1238' => 'cde', 'Cfa000467' => 'cfa', 'Cfa000947' => 'cfa', 'Cfa004969' => 'cfa', 'Cfa005284' => 'cfa', 'Cfa008993' => 'cfa', 'Cfa018187' => 'cfa', 'Cfa018454' => 'cfa', 'Cfa020585' => 'cfa', 'Ciclev10000424m.g' => 'ccl', 'Ciclev10003605m.g' => 'ccl', 'Ciclev10007828m.g' => 'ccl', 'Ciclev10014620m.g' => 'ccl', 'Ciclev10015169m.g' => 'ccl', 'Ciclev10018291m.g' => 'ccl', 'Ciclev10028256m.g' => 'ccl', 'Ciclev10033822m.g' => 'ccl', 'CiPaw.05G060300' => 'cil', 'CiPaw.05G085000' => 'cil', 'CiPaw.06G083700' => 'cil', 'CiPaw.06G120300' => 'cil', 'CiPaw.09G060500' => 'cil', 'CiPaw.09G123800' => 'cil', 'CiPaw.11G169700' => 'cil', 'CiPaw.12G118300' => 'cil', 'CiPaw.15G071000' => 'cil', 'CiPaw.15G081900' => 'cil', 'ClCG01G024610' => 'cla', 'ClCG03G006070' => 'cla', 'ClCG05G019250' => 'cla', 'ClCG09G009500' => 'cla', 'ClCG11G008200' => 'cla', 'ClCG11G018080' => 'cla', 'COL.COLO4_17373' => 'col', 'COL.COLO4_22994' => 'col', 'COL.COLO4_26389' => 'col', 'COL.COLO4_27170' => 'col', 'COL.COLO4_31074' => 'col', 'COL.COLO4_31465' => 'col', 'COL.COLO4_36438' => 'col', 'COL.COLO4_36439' => 'col', 'Cpa.g.c38781' => 'cpa', 'Cpa.g.sc128.12' => 'cpa', 'Cpa.g.sc166.7' => 'cpa', 'Cpa.g.sc166.8' => 'cpa', 'Cpa.g.sc20.111' => 'cpa', 'Cpa.g.sc27.31' => 'cpa', 'Cpa.g.sc64.36' => 'cpa', 'Cpa.g.sc64.37' => 'cpa', 'Cpa.g.sc66.49' => 'cpa', 'Cpa.g.sc80.64' => 'cpa', 'CsaV3_1G012320' => 'csa', 'CsaV3_2G008480' => 'csa', 'CsaV3_2G033450' => 'csa', 'CsaV3_3G044830' => 'csa', 'CsaV3_4G033710' => 'csa', 'CsaV3_6G051730' => 'csa', 'CsaV3_7G025350' => 'csa', 'CSS0001067' => 'camsi', 'CSS0005996' => 'camsi', 'CSS0006590' => 'camsi', 'CSS0009673' => 'camsi', 'CSS0010201' => 'camsi', 'CSS0010549' => 'camsi', 'CSS0011364' => 'camsi', 'CSS0014473' => 'camsi', 'CSS0014961' => 'camsi', 'CSS0020191' => 'camsi', 'CSS0021165' => 'camsi', 'CSS0022306' => 'camsi', 'CSS0030591' => 'camsi', 'CSS0030696' => 'camsi', 'CSS0032653' => 'camsi', 'CSS0037487' => 'camsi', 'CSS0041102' => 'camsi', 'CSS0041261' => 'camsi', 'CSS0046246' => 'camsi', 'CSS0049256' => 'camsi', 'DCAR_004075' => 'dca', 'DCAR_011538' => 'dca', 'DCAR_019553' => 'dca', 'DCAR_020952' => 'dca', 'DCAR_021739' => 'dca', 'DCAR_027407' => 'dca', 'DCAR_027913' => 'dca', 'DCAR_028066' => 'dca', 'Dinv05899' => 'din', 'Dinv07563' => 'din', 'Dinv08010' => 'din', 'Dinv14125' => 'din', 'Dinv20172' => 'din', 'Dinv30743' => 'din', 'Dinv31229' => 'din', 'Dinv34162' => 'din', 'Dinv36028' => 'din', 'Dinv39368' => 'din', 'Dinv40565' => 'din', 'Dinv41706' => 'din', 'Duzib052G0089' => 'dzi', 'Duzib116G0641' => 'dzi', 'Duzib132G0069' => 'dzi', 'Duzib132G1219' => 'dzi', 'Duzib147G0278' => 'dzi', 'Duzib160G0480' => 'dzi', 'Duzib170G0661' => 'dzi', 'Duzib177G0591' => 'dzi', 'Duzib187G1353' => 'dzi', 'Duzib192G0858' => 'dzi', 'Duzib192G0883' => 'dzi', 'Duzib213G0506' => 'dzi', 'Duzib235G0289' => 'dzi', 'Duzib251G0422' => 'dzi', 'ECA232G3898' => 'eca', 'ECA233G5950' => 'eca', 'ECA234G1699' => 'eca', 'ECA234G2421' => 'eca', 'ECA236G0426' => 'eca', 'ECA236G4331' => 'eca', 'ECA248G2573' => 'eca', 'EL10Ac1g00077' => 'bvu', 'EL10Ac1g01746' => 'bvu', 'EL10Ac2g03464' => 'bvu', 'EL10Ac4g08176' => 'bvu', 'EL10Ac7g17521' => 'bvu', 'EL10Ac8g20386' => 'bvu', 'EL10Ac9g21343' => 'bvu', 'EL10Ac9g22688' => 'bvu', 'Eucgr.B03434' => 'egr', 'Eucgr.D00618' => 'egr', 'Eucgr.E02395' => 'egr', 'Eucgr.F01129' => 'egr', 'Eucgr.F02622' => 'egr', 'Eucgr.F04207' => 'egr', 'FAN01G0570' => 'fan', 'FAN03G3351' => 'fan', 'FAN06G3702' => 'fan', 'FAN07G2149' => 'fan', 'FAN10G3758' => 'fan', 'FAN11G1170' => 'fan', 'FAN11G2050' => 'fan', 'FAN11G2724' => 'fan', 'FAN12G1700' => 'fan', 'FAN12G2028' => 'fan', 'FAN15G1160' => 'fan', 'FAN15G3063' => 'fan', 'FAN16G2540' => 'fan', 'FAN16G3077' => 'fan', 'FAN16G3624' => 'fan', 'FAN17G0221' => 'fan', 'FAN20G2492' => 'fan', 'FAN20G2905' => 'fan', 'FAN21G0548' => 'fan', 'FAN21G1300' => 'fan', 'FAN22G0077' => 'fan', 'FAN22G1315' => 'fan', 'FAN24G1280' => 'fan', 'FAN24G1445' => 'fan', 'FAN24G3527' => 'fan', 'FAN25G0464' => 'fan', 'FAN25G2885' => 'fan', 'FAN25G3270' => 'fan', 'FAN27G1101' => 'fan', 'FAN27G2846' => 'fan', 'FAN27G3524' => 'fan', 'FvH4_2g11770' => 'fve', 'FvH4_2g15630' => 'fve', 'FvH4_3g05570' => 'fve', 'FvH4_3g09110' => 'fve', 'FvH4_3g19940' => 'fve', 'FvH4_4g04821' => 'fve', 'FvH4_4g31480' => 'fve', 'FvH4_7g01740' => 'fve', 'Glyma.05G130400' => 'gma', 'Glyma.05G156400' => 'gma', 'Glyma.07G197000' => 'gma', 'Glyma.08G085151' => 'gma', 'Glyma.08G114500' => 'gma', 'Glyma.08G300400' => 'gma', 'Glyma.10G215800' => 'gma', 'Glyma.12G224400' => 'gma', 'Glyma.13G179300' => 'gma', 'Glyma.13G218151' => 'gma', 'Glyma.13G238800' => 'gma', 'Glyma.13G276900' => 'gma', 'Glyma.14G078200' => 'gma', 'Glyma.15G074500' => 'gma', 'Glyma.15G094100' => 'gma', 'Glyma.17G247200' => 'gma', 'Glyma.18G120100' => 'gma', 'Glyma.20G176000' => 'gma', 'Gohir.A01G063600' => 'ghi', 'Gohir.A01G170301' => 'ghi', 'Gohir.A02G060500' => 'ghi', 'Gohir.A05G133850' => 'ghi', 'Gohir.A05G161400' => 'ghi', 'Gohir.A06G012900' => 'ghi', 'Gohir.A06G035901' => 'ghi', 'Gohir.A06G127100' => 'ghi', 'Gohir.A06G210500' => 'ghi', 'Gohir.A08G008650' => 'ghi', 'Gohir.A09G072700' => 'ghi', 'Gohir.A09G088301' => 'ghi', 'Gohir.A10G040600' => 'ghi', 'Gohir.A12G036300' => 'ghi', 'Gohir.A12G143350' => 'ghi', 'Gohir.A12G165500' => 'ghi', 'Gohir.A13G145700' => 'ghi', 'Gohir.D01G050000' => 'ghi', 'Gohir.D01G051366' => 'ghi', 'Gohir.D01G161350' => 'ghi', 'Gohir.D02G065900' => 'ghi', 'Gohir.D05G164200' => 'ghi', 'Gohir.D05G355500' => 'ghi', 'Gohir.D06G010400' => 'ghi', 'Gohir.D06G111250' => 'ghi', 'Gohir.D06G132000' => 'ghi', 'Gohir.D06G210500' => 'ghi', 'Gohir.D07G165675' => 'ghi', 'Gohir.D08G062240' => 'ghi', 'Gohir.D08G086101' => 'ghi', 'Gohir.D08G138060' => 'ghi', 'Gohir.D09G072300' => 'ghi', 'Gohir.D10G041400' => 'ghi', 'Gohir.D11G191020' => 'ghi', 'Gohir.D11G212066' => 'ghi', 'Gohir.D12G036300' => 'ghi', 'Gohir.D12G168600' => 'ghi', 'Gohir.D13G150600' => 'ghi', 'Gorai.001G057300' => 'gra', 'Gorai.002G069900' => 'gra', 'Gorai.002G200000' => 'gra', 'Gorai.003G067600' => 'gra', 'Gorai.005G074800' => 'gra', 'Gorai.006G087300' => 'gra', 'Gorai.008G037500' => 'gra', 'Gorai.008G181400' => 'gra', 'Gorai.009G169400' => 'gra', 'Gorai.009G387900' => 'gra', 'Gorai.010G013300' => 'gra', 'Gorai.010G153800' => 'gra', 'Gorai.010G255800' => 'gra', 'Gorai.011G043700' => 'gra', 'Gorai.011G198900' => 'gra', 'Gorai.013G168400' => 'gra', 'GSVIVG01005212001' => 'vvi', 'GSVIVG01006163001' => 'vvi', 'GSVIVG01009625001' => 'vvi', 'GSVIVG01014338001' => 'vvi', 'GSVIVG01020005001' => 'vvi', 'GSVIVG01021450001' => 'vvi', 'GSVIVG01023975001' => 'vvi', 'GSVIVG01034490001' => 'vvi', 'HanXRQChr04g0112071' => 'han', 'HanXRQChr05g0131151' => 'han', 'HanXRQChr09g0262371' => 'han', 'HanXRQChr09g0268401' => 'han', 'HanXRQChr10g0279241' => 'han', 'HanXRQChr10g0297961' => 'han', 'HanXRQChr11g0326231' => 'han', 'HanXRQChr11g0328471' => 'han', 'HanXRQChr16g0507941' => 'han', 'HanXRQChr17g0560211' => 'han', 'Haze_02108' => 'cav', 'Haze_02428' => 'cav', 'Haze_05593' => 'cav', 'Haze_06448' => 'cav', 'Haze_09427' => 'cav', 'Haze_12022' => 'cav', 'Haze_17612' => 'cav', 'Haze_17928' => 'cav', 'Hma1.2p1_0032F.1_g019250' => 'hma', 'Hma1.2p1_0163F.1_g072690' => 'hma', 'Hma1.2p1_0265F.1_g106710' => 'hma', 'Hma1.2p1_0286F.1_g113970' => 'hma', 'Hma1.2p1_0363F.1_g136640' => 'hma', 'Hma1.2p1_0584F.1_g183470' => 'hma', 'Hma1.2p1_0885F.1_g232570' => 'hma', 'HPP92_006022' => 'vpl', 'HPP92_007320' => 'vpl', 'HPP92_011521' => 'vpl', 'HPP92_019387' => 'vpl', 'HPP92_024038' => 'vpl', 'Hund05891' => 'sun', 'Hund06450' => 'sun', 'Hund12053' => 'sun', 'Hund16800' => 'sun', 'Hund21222' => 'sun', 'Hund22896' => 'sun', 'Hund23746' => 'sun', 'Hund27083' => 'sun', 'Lalb_Chr02g0141831' => 'lal', 'Lalb_Chr02g0141841' => 'lal', 'Lalb_Chr05g0220411' => 'lal', 'Lalb_Chr06g0162081' => 'lal', 'Lalb_Chr09g0327651' => 'lal', 'Lalb_Chr13g0295051' => 'lal', 'Lalb_Chr15g0086801' => 'lal', 'Lalb_Chr16g0383781' => 'lal', 'Lalb_Chr16g0383791' => 'lal', 'Lalb_Chr18g0055441' => 'lal', 'Lalb_Chr18g0059611' => 'lal', 'Lalb_Chr20g0109661' => 'lal', 'Lalb_Chr20g0109831' => 'lal', 'Lalb_Chr20g0121871' => 'lal', 'Lalb_Chr22g0355361' => 'lal', 'Lalb_Chr25g0286371' => 'lal', 'Lj1A1187G43' => 'lonja', 'Lj1A1205T50' => 'lonja', 'Lj1A800G33' => 'lonja', 'Lj1C1187T7' => 'lonja', 'Lj1C843T11' => 'lonja', 'Lj1g0010940' => 'lja', 'Lj2A288T69' => 'lonja', 'Lj3g0024276' => 'lja', 'Lj4A47T76' => 'lonja', 'Lj4g0005805' => 'lja', 'Lj4g0006097' => 'lja', 'Lj4g0008528' => 'lja', 'Lj4g0024907' => 'lja', 'Lj5g0012472' => 'lja', 'Lj5g0018648' => 'lja', 'Lj6C789G1' => 'lonja', 'Lj6g0004000' => 'lja', 'Lj7A292G67' => 'lonja', 'Lj7A292T64' => 'lonja', 'Lj9A400T58' => 'lonja', 'Lsat_1_v5_gn_1_126181' => 'lsa', 'Lsat_1_v5_gn_4_123041' => 'lsa', 'Lsat_1_v5_gn_4_133620' => 'lsa', 'Lsat_1_v5_gn_4_53221' => 'lsa', 'Lsat_1_v5_gn_4_71961' => 'lsa', 'Lsat_1_v5_gn_7_105241' => 'lsa', 'Lsat_1_v5_gn_7_21361' => 'lsa', 'Lsat_1_v5_gn_7_28860' => 'lsa', 'Lsat_1_v5_gn_7_31260' => 'lsa', 'Lsat_1_v5_gn_8_52801' => 'lsa', 'Manes.02G191400' => 'mes', 'Manes.03G110100' => 'mes', 'Manes.04G071100' => 'mes', 'Manes.05G100500' => 'mes', 'Manes.05G164700' => 'mes', 'Manes.15G087000' => 'mes', 'Manes.15G121500' => 'mes', 'Manes.16G028300' => 'mes', 'Manes.17G046100' => 'mes', 'Manes.17G069800' => 'mes', 'Manes.18G100500' => 'mes', 'Mapoly0002s0109' => 'mpo', 'Mapoly0024s0007' => 'mpo', 'Mapoly0089s0032' => 'mpo', 'MBI04_g42241_MAGBIO' => 'mbi', 'MBI05_g11988_MAGBIO' => 'mbi', 'MBI05_g35452_MAGBIO' => 'mbi', 'MBI07_g30179_MAGBIO' => 'mbi', 'MBI07_g35859_MAGBIO' => 'mbi', 'MBI07_g35860_MAGBIO' => 'mbi', 'MBI07_g37166_MAGBIO' => 'mbi', 'MBI08_g18172_MAGBIO' => 'mbi', 'MBI09_g08441_MAGBIO' => 'mbi', 'MBI13_g01676_MAGBIO' => 'mbi', 'MBI14_g42955_MAGBIO' => 'mbi', 'MBI16_g13161_MAGBIO' => 'mbi', 'MBI17_g27204_MAGBIO' => 'mbi', 'MBI19_g21595_MAGBIO' => 'mbi', 'MD00G1148400' => 'mdo', 'MD02G1301200' => 'mdo', 'MD03G1227800' => 'mdo', 'MD05G1041100' => 'mdo', 'MD05G1124800' => 'mdo', 'MD05G1284000' => 'mdo', 'MD05G1338800' => 'mdo', 'MD05G1338900' => 'mdo', 'MD07G1022800' => 'mdo', 'MD10G1047500' => 'mdo', 'MD10G1127500' => 'mdo', 'MD10G1262300' => 'mdo', 'MD10G1293800' => 'mdo', 'MD16G1074300' => 'mdo', 'Medtr1g021670' => 'mtr', 'Medtr1g096320' => 'mtr', 'Medtr2g013690' => 'mtr', 'Medtr2g019450' => 'mtr', 'Medtr2g085170' => 'mtr', 'Medtr4g088785' => 'mtr', 'Medtr8g055930' => 'mtr', 'Medtr8g085850' => 'mtr', 'MELO3C002605.2' => 'cme', 'MELO3C003891.2' => 'cme', 'MELO3C004012.2' => 'cme', 'MELO3C007134.2' => 'cme', 'MELO3C008118.2' => 'cme', 'MELO3C016700.2' => 'cme', 'MELO3C024127.2' => 'cme', 'MELO3C033361.2' => 'cme', 'MELO3C033362.2' => 'cme', 'Migut.C00430' => 'egut', 'Migut.C01246' => 'egut', 'Migut.E00101' => 'egut', 'Migut.H01486' => 'egut', 'Migut.H01939' => 'egut', 'Migut.K00360' => 'egut', 'Migut.M00910' => 'egut', 'Migut.M01139' => 'egut', 'Migut.N02677' => 'egut', 'MSTRG.13252' => 'ama', 'MSTRG.14701' => 'ama', 'MSTRG.1521' => 'ama', 'MSTRG.15884' => 'ama', 'MSTRG.16242' => 'ama', 'MSTRG.22285' => 'ama', 'MSTRG.22444' => 'ama', 'MSTRG.2349' => 'ama', 'MSTRG.26308' => 'ama', 'MSTRG.28296' => 'ama', 'MSTRG.9895' => 'ama', 'Nitab4.5_0000110g0060' => 'nta', 'Nitab4.5_0000420g0130' => 'nta', 'Nitab4.5_0000422g0030' => 'nta', 'Nitab4.5_0000560g0180' => 'nta', 'Nitab4.5_0000703g0100' => 'nta', 'Nitab4.5_0000786g0200' => 'nta', 'Nitab4.5_0001336g0020' => 'nta', 'Nitab4.5_0001796g0030' => 'nta', 'Nitab4.5_0003348g0060' => 'nta', 'Nitab4.5_0003698g0040' => 'nta', 'Nitab4.5_0003942g0090' => 'nta', 'Nitab4.5_0004775g0070' => 'nta', 'Nitab4.5_0004864g0030' => 'nta', 'Nitab4.5_0005615g0020' => 'nta', 'Nitab4.5_0009288g0030' => 'nta', 'Nitab4.5_0009341g0010' => 'nta', 'Nitab4.5_0009535g0010' => 'nta', 'Nn1g03995' => 'nnu', 'Nn1g04100' => 'nnu', 'Nn1g06530' => 'nnu', 'Nn3g16404' => 'nnu', 'Nn3g17212' => 'nnu', 'Nn3g20776' => 'nnu', 'Nn3g21923' => 'nnu', 'Nn5g27737' => 'nnu', 'Nn5g29461' => 'nnu', 'Nn7g38355' => 'nnu', 'Nn8g39873' => 'nnu', 'Oeu000548.2' => 'oeu', 'Oeu004672.1' => 'oeu', 'Oeu015605.2' => 'oeu', 'Oeu016092.1' => 'oeu', 'Oeu017879.3' => 'oeu', 'Oeu024910.1' => 'oeu', 'Oeu028965.1' => 'oeu', 'Oeu031269.1' => 'oeu', 'Oeu031270.1' => 'oeu', 'Oeu032535.1' => 'oeu', 'Oeu034151.1' => 'oeu', 'Oeu034152.1' => 'oeu', 'Oeu034588.2' => 'oeu', 'Oeu050846.1' => 'oeu', 'Oeu050849.2' => 'oeu', 'Oeu051063.2' => 'oeu', 'Oeu052368.1' => 'oeu', 'Oeu052370.1' => 'oeu', 'Os01g0210400' => 'osa', 'Os01g0304300' => 'osa', 'Os01g0749100' => 'osa', 'Os02g0745800' => 'osa', 'Os03g0769050' => 'osa', 'Os05g0531500' => 'osa', 'Os06g0724300' => 'osa', 'Os11g0198100' => 'osa', 'Peaxi162Scf00069g01425' => 'pax', 'Peaxi162Scf00280g00811' => 'pax', 'Peaxi162Scf00310g00615' => 'pax', 'Peaxi162Scf00362g00542' => 'pax', 'Peaxi162Scf00461g00310' => 'pax', 'Peaxi162Scf00530g00118' => 'pax', 'Peaxi162Scf00541g00057' => 'pax', 'Peaxi162Scf00661g00017' => 'pax', 'Peaxi162Scf00926g00027' => 'pax', 'Peaxi162Scf01064g00263' => 'pax', 'Peaxi162Scf01211g00135' => 'pax', 'PGR004G2336' => 'pgr', 'PGR042G0327' => 'pgr', 'PGR042G1957' => 'pgr', 'PGR042G2003' => 'pgr', 'PGR042G3929' => 'pgr', 'PGR083G1137' => 'pgr', 'PGR083G1364' => 'pgr', 'PGSC0003DMG400003381' => 'stu', 'PGSC0003DMG400003417' => 'stu', 'PGSC0003DMG400008981' => 'stu', 'PGSC0003DMG400012417' => 'stu', 'PGSC0003DMG400012823' => 'stu', 'PGSC0003DMG400016885' => 'stu', 'PGSC0003DMG400022812' => 'stu', 'PGSC0003DMG400029726' => 'stu', 'PGSC0003DMG401009243' => 'stu', 'PGSC0003DMG401031505' => 'stu', 'PGSC0003DMG402031505' => 'stu', 'Phvul.001G017600' => 'pvu', 'Phvul.002G193500' => 'pvu', 'Phvul.002G228900' => 'pvu', 'Phvul.002G236800' => 'pvu', 'Phvul.003G049500' => 'pvu', 'Phvul.005G072000' => 'pvu', 'Phvul.006G164800' => 'pvu', 'Phvul.006G185100' => 'pvu', 'Phvul.007G090000' => 'pvu', 'Potri.001G399800' => 'ptr', 'Potri.002G149900' => 'ptr', 'Potri.004G044100' => 'ptr', 'Potri.004G177600' => 'ptr', 'Potri.009G138000' => 'ptr', 'Potri.010G094000' => 'ptr', 'Potri.011G053000' => 'ptr', 'Potri.011G119300' => 'ptr', 'Potri.013G113700' => 'ptr', 'Potri.018G107800' => 'ptr', 'Potri.019G084100' => 'ptr', 'Pp3c14_23720' => 'ppa', 'Pp3c16_6340' => 'ppa', 'Pp3c23_13420' => 'ppa', 'Pp3c24_2740' => 'ppa', 'Pp3c25_860' => 'ppa', 'Pp3c8_21750' => 'ppa', 'Prupe.1G273000' => 'ppe', 'Prupe.1G273700' => 'ppe', 'Prupe.1G274100' => 'ppe', 'Prupe.2G023300' => 'ppe', 'Prupe.4G048000' => 'ppe', 'Prupe.4G080400' => 'ppe', 'Prupe.4G181200' => 'ppe', 'Prupe.8G056900' => 'ppe', 'Prupe.8G168700' => 'ppe', 'Psat1g189080' => 'psa', 'Psat1g204760' => 'psa', 'Psat4g175560' => 'psa', 'Psat4g177720' => 'psa', 'Psat5g244240' => 'psa', 'Psat6g010720' => 'psa', 'Psat6g187200' => 'psa', 'Psat7g072040' => 'psa', 'PSO017G3501' => 'pso', 'PSO063G2148' => 'pso', 'PSO063G5608' => 'pso', 'PSO210G6392' => 'pso', 'PSO541G2319' => 'pso', 'PSO541G2836' => 'pso', 'PSO541G4012' => 'pso', 'PSO541G6253' => 'pso', 'PSO675G0580' => 'pso', 'PSO675G0856' => 'pso', 'PSO675G5635' => 'pso', 'PSO675G9157' => 'pso', 'PSO832G1660' => 'pso', 'PSO832G1969' => 'pso', 'QL02p007186' => 'qlo', 'QL02p033904' => 'qlo', 'QL03p064391' => 'qlo', 'QL05p040593' => 'qlo', 'QL05p058242' => 'qlo', 'QL08p021825' => 'qlo', 'QL11p004981' => 'qlo', 'RcHm_v2.0_Chr1g0318301' => 'rch', 'RcHm_v2.0_Chr4g0418501' => 'rch', 'RcHm_v2.0_Chr4g0439971' => 'rch', 'RcHm_v2.0_Chr5g0008541' => 'rch', 'RcHm_v2.0_Chr5g0014101' => 'rch', 'RcHm_v2.0_Chr5g0014131' => 'rch', 'RcHm_v2.0_Chr5g0033621' => 'rch', 'RcHm_v2.0_Chr6g0272041' => 'rch', 'RcHm_v2.0_Chr6g0278831' => 'rch', 'Rhsim02G0130400' => 'rsi', 'Rhsim02G0171100' => 'rsi', 'Rhsim05G0053000' => 'rsi', 'Rhsim05G0053100' => 'rsi', 'Rhsim06G0096500' => 'rsi', 'Rhsim06G0096600' => 'rsi', 'Rhsim06G0199100' => 'rsi', 'Rhsim12G0062300' => 'rsi', 'Rhsim12G0062800' => 'rsi', 'Sabra02G0118600' => 'sbr', 'Sabra04G0027300' => 'sbr', 'Sabra04G0119500' => 'sbr', 'Sabra08G0112500' => 'sbr', 'Sabra11G0036800' => 'sbr', 'Sabra11G0103800' => 'sbr', 'Sabra13G0096300' => 'sbr', 'Sabra16G0262300' => 'sbr', 'Sabra18G0091700' => 'sbr', 'Sabra19G0095400' => 'sbr', 'SalBow6G3080' => 'sbo', 'SalBow7G1157' => 'sbo', 'SalBow7G2123' => 'sbo', 'SalBow7G2285' => 'sbo', 'SalBow7G3537' => 'sbo', 'SalBow8G2947' => 'sbo', 'SalBow8G4463' => 'sbo', 'SalBow8G5466' => 'sbo', 'Sc01g0001750' => 'sci', 'Sc02g0006640' => 'sci', 'Sc02g0006670' => 'sci', 'Sc04g0008220' => 'sci', 'Sc05g0006190' => 'sci', 'Sc08g0002760' => 'sci', 'Sc17g0006170' => 'sci', 'Sc22g0002050' => 'sci', 'Sc23g0001190' => 'sci', 'Sc24g0000980' => 'sci', 'Sed0006245' => 'sed', 'Sed0007543' => 'sed', 'Sed0009411' => 'sed', 'Sed0010765' => 'sed', 'Sed0012944' => 'sed', 'Sed0014682' => 'sed', 'Sed0016174' => 'sed', 'Sed0016796' => 'sed', 'Sed0020317' => 'sed', 'Sed0021467' => 'sed', 'SEGI_01316' => 'sgi', 'SEGI_03374' => 'sgi', 'SEGI_16265' => 'sgi', 'SEGI_18569' => 'sgi', 'SEGI_20351' => 'sgi', 'SEGI_26395' => 'sgi', 'SEGI_29469' => 'sgi', 'SEGI_34771' => 'sgi', 'SEGI_36769' => 'sgi', 'SEGI_37139' => 'sgi', 'SGA_v2.0_scaffold100G29687' => 'sas', 'SGA_v2.0_scaffold118G32472' => 'sas', 'SGA_v2.0_scaffold14G07051' => 'sas', 'SGA_v2.0_scaffold183G39845' => 'sas', 'SGA_v2.0_scaffold1G00174' => 'sas', 'SGA_v2.0_scaffold22G09714' => 'sas', 'SGA_v2.0_scaffold333G48992' => 'sas', 'SGA_v2.0_scaffold46G17491' => 'sas', 'SGA_v2.0_scaffold49G18294' => 'sas', 'SGA_v2.0_scaffold63G21658' => 'sas', 'SHI01741' => 'shi', 'SHI05771' => 'shi', 'SHI18077' => 'shi', 'SHI20525' => 'shi', 'SHI20527' => 'shi', 'SHI20528' => 'shi', 'SMO172G0185' => 'smo', 'SMO198G0020' => 'smo', 'SMO351G0006' => 'smo', 'SMO356G0118' => 'smo', 'SMO358G0296' => 'smo', 'SMO367G0079' => 'smo', 'SMO367G1277' => 'smo', 'Solyc01g014220.3' => 'sly', 'Solyc01g111770.2' => 'sly', 'Solyc02g078180.3' => 'sly', 'Solyc03g006430.3' => 'sly', 'Solyc03g006456.1' => 'sly', 'Solyc03g079860.2' => 'sly', 'Solyc04g079770.3' => 'sly', 'Solyc05g007430.4' => 'sly', 'Solyc07g063150.3' => 'sly', 'Solyc08g016620.3' => 'sly', 'Solyc09g057590.3' => 'sly', 'Solyc09g057600.1' => 'sly', 'Solyc10g009050.3' => 'sly', 'Solyc11g017420.2' => 'sly', 'Sopen01g053810' => 'spe', 'Sopen02g023040' => 'spe', 'Sopen03g002440' => 'spe', 'Sopen04g033350' => 'spe', 'Sopen05g003310' => 'spe', 'Sopen07g004050' => 'spe', 'Sopen07g031340' => 'spe', 'Sopen08g006990' => 'spe', 'Sopen10g004830' => 'spe', 'Sopen11g009370' => 'spe', 'Sp1g24450' => 'spa', 'Sp1g29670' => 'spa', 'Sp1g39600' => 'spa', 'Sp2g11080' => 'spa', 'Sp2g13970' => 'spa', 'Sp4g16130' => 'spa', 'Sp6g13080' => 'spa', 'Sp7g37270' => 'spa', 'TAR371G0065' => 'tar', 'TAR376G0340' => 'tar', 'TAR376G0435' => 'tar', 'TAR381G0002' => 'tar', 'TAR381G1236' => 'tar', 'TAR624G0055' => 'tar', 'TAR624G0324' => 'tar', 'TAR624G0696' => 'tar', 'TAR624G0906' => 'tar', 'TAR625G0107' => 'tar', 'TAR626G0015' => 'tar', 'TAR626G1356' => 'tar', 'TAR627G0888' => 'tar', 'TAR628G0399' => 'tar', 'TAR628G1327' => 'tar', 'TAR629G2831' => 'tar', 'TAR629G2874' => 'tar', 'TAR633G1432' => 'tar', 'TAR633G2771' => 'tar', 'THA.LOC104803394' => 'tha', 'THA.LOC104805153' => 'tha', 'THA.LOC104806784' => 'tha', 'THA.LOC104810473' => 'tha', 'THA.LOC104813100' => 'tha', 'THA.LOC104814215' => 'tha', 'THA.LOC104815554' => 'tha', 'THA.LOC104820544' => 'tha', 'THA.LOC104824754' => 'tha', 'THA.LOC104827717' => 'tha', 'Thecc.02G031400' => 'tca', 'Thecc.02G055900' => 'tca', 'Thecc.02G350800' => 'tca', 'Thecc.06G150900' => 'tca', 'Thecc.06G186600' => 'tca', 'Thecc.07G089600' => 'tca', 'Thecc.08G020400' => 'tca', 'Thecc.08G182100' => 'tca', 'Thhalv10000873m.g' => 'esa', 'Thhalv10004185m.g' => 'esa', 'Thhalv10006981m.g' => 'esa', 'Thhalv10007204m.g' => 'esa', 'Thhalv10011374m.g' => 'esa', 'Thhalv10013482m.g' => 'esa', 'Thhalv10017801m.g' => 'esa', 'Thhalv10024983m.g' => 'esa', 'TPR.G12072' => 'tpr', 'TPR.G15769' => 'tpr', 'TPR.G16504' => 'tpr', 'TPR.G16506' => 'tpr', 'TPR.G24345' => 'tpr', 'TPR.G26666' => 'tpr', 'TPR.G27320' => 'tpr', 'TPR.G31819' => 'tpr', 'TPR.G38879' => 'tpr', 'TPR.G39015' => 'tpr', 'TPR.G8819' => 'tpr', 'TWI09G0924' => 'twi', 'TWI12G0811' => 'twi', 'TWI12G1294' => 'twi', 'TWI31G0150' => 'twi', 'TWI36G1262' => 'twi', 'TWI38G1287' => 'twi', 'TWI38G1633' => 'twi', 'TWI38G1982' => 'twi', 'TWI39G0116' => 'twi', 'TWI60G1011' => 'twi', 'TWI63G0171' => 'twi', 'TWI73G0839' => 'twi', 'TWI79G1511' => 'twi', 'unitig_0.g915' => 'ugi', 'unitig_0.g916' => 'ugi', 'unitig_21.g20219' => 'ugi', 'unitig_21.g20416' => 'ugi', 'unitig_578.g16132' => 'ugi', 'unitig_578.g16718' => 'ugi', 'unitig_62.g23481' => 'ugi', 'unitig_744.g24535' => 'ugi', 'unitig_749.g13525' => 'ugi', 'vmacro01248' => 'vma', 'vmacro02290' => 'vma', 'vmacro10946' => 'vma', 'vmacro11865' => 'vma', 'vmacro12493' => 'vma', 'vmacro17322' => 'vma', 'vmacro21599' => 'vma', 'vmacro23041' => 'vma', 'VMungo0251G0004' => 'vmu', 'VMungo0251G2639' => 'vmu', 'VMungo0251G2967' => 'vmu', 'VMungo0540G0864' => 'vmu', 'VMungo0540G1569' => 'vmu', 'VMungo0647G0317' => 'vmu', 'VMungo0720G1373' => 'vmu', 'VMungo0720G1508' => 'vmu', 'VMungo1080G0485' => 'vmu', 'VMungo1215G3177' => 'vmu', 'Zm00001eb112600' => 'zma', 'Zm00001eb120220' => 'zma', 'Zm00001eb153240' => 'zma', 'Zm00001eb168880' => 'zma', 'Zm00001eb213920' => 'zma', 'Zm00001eb228280' => 'zma', 'Zm00001eb254580' => 'zma', 'Zm00001eb272180' => 'zma', 'Zm00001eb293190' => 'zma', 'Zm00001eb322930' => 'zma', 'Zm00001eb353360' => 'zma', 'Zm00001eb353390' => 'zma', 'Zm00001eb353430' => 'zma', 'Zm00001eb353440' => 'zma', 'Zm00001eb353780' => 'zma' ) $gf_id = 'HOM05D000499' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000499' ) $data_identifier = 'HOM05D000499' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 29, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 12, 'amhyb' => (int) 8, 'aly' => (int) 12, 'aox' => (int) 9, 'arhy' => (int) 26, 'ath' => (int) 8, 'atr' => (int) 7, 'acertr' => (int) 10, 'cqu' => (int) 15, 'bca' => (int) 29, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 11, 'cansat' => (int) 8, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 9, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 8, 'cpa' => (int) 10, 'csa' => (int) 7, 'camsi' => (int) 20, 'dca' => (int) 8, 'din' => (int) 12, 'dzi' => (int) 14, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 6, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 38, 'gra' => (int) 16, 'vvi' => (int) 8, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 5, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 11, 'lja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 11, 'mpo' => (int) 3, 'mbi' => (int) 14, 'mdo' => (int) 14, 'mtr' => (int) 8, 'cme' => (int) 9, 'egut' => (int) 9, 'ama' => (int) 11, 'nta' => (int) 17, 'nnu' => (int) 11, 'oeu' => (int) 18, 'osa' => (int) 8, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 6, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 9, 'rsi' => (int) 9, 'sbr' => (int) 10, 'sbo' => (int) 8, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 10, 'sas' => (int) 10, 'shi' => (int) 6, 'smo' => (int) 7, 'sly' => (int) 14, 'spe' => (int) 10, 'spa' => (int) 8, 'tar' => (int) 19, 'tha' => (int) 10, 'tca' => (int) 8, 'esa' => (int) 8, 'tpr' => (int) 11, 'twi' => (int) 13, 'ugi' => (int) 9, 'vma' => (int) 8, 'vmu' => (int) 10, 'zma' => (int) 15 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb353780' $species_info = array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ) $local_species = 'pso' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000499', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1066', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p29780' => 'bna', 'A02p33180' => 'bna', 'A03p16470' => 'bna', 'A03p66010' => 'bna', 'A04p25970' => 'bna', 'A06p01270' => 'bna', 'A06p46080' => 'bna', 'A07p11400' => 'bna', 'A08p01840' => 'bna', 'A08p08230' => 'bna', 'A08p25740' => 'bna', 'A09p32070' => 'bna', 'A09p37830' => 'bna', 'A09p42840' => 'bna', 'A09p42850' => 'bna', 'Aa31LG10G2060' => 'aar', 'Aa31LG2G7410' => 'aar', 'Aa31LG6G10200' => 'aar', 'Aa31LG6G16680' => 'aar', 'Aa31LG6G8470' => 'aar', 'Aa31LG9G12730' => 'aar', 'Aa31LG9G13680' => 'aar', 'Aa31LG9G14920' => 'aar', 'Aa31LG9G6650' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4977' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5467' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3254' => 'aag', 'Actinidia02578' => 'ach', 'Actinidia07693' => 'ach', 'Actinidia08413' => 'ach', 'Actinidia08414' => 'ach', 'Actinidia15289' => 'ach', 'Actinidia19871' => 'ach', 'Actinidia21475' => 'ach', 'Actinidia22576' => 'ach', 'Actinidia28327' => 'ach', 'Actinidia32491' => 'ach', 'Actinidia39463' => 'ach', 'Actinidia39571' => 'ach', 'Ah.01g013750' => 'amhyb', 'Ah.01g023210' => 'amhyb', 'Ah.04g164850' => 'amhyb', 'Ah.05g178060' => 'amhyb', 'Ah.07g204270' => 'amhyb', 'Ah.07g208480' => 'amhyb', 'Ah.09g237410' => 'amhyb', 'Ah.14g089460' => 'amhyb', 'AL1G41790' => 'aly', 'AL1G49050' => 'aly', 'AL1G53810' => 'aly', 'AL1G61400' => 'aly', 'AL4G18580' => 'aly', 'AL5G12510' => 'aly', 'AL5G12540' => 'aly', 'AL6G43230' => 'aly', 'AL7G10370' => 'aly', 'AL7G19250' => 'aly', 'AL8G12240' => 'aly', 'AL8G18540' => 'aly', 'Aqoxy1G02409' => 'aox', 'Aqoxy2G03993' => 'aox', 'Aqoxy3G03357' => 'aox', 'Aqoxy4G00785' => 'aox', 'Aqoxy5G02598' => 'aox', 'Aqoxy6G00132' => 'aox', 'Aqoxy7G01776' => 'aox', 'Aqoxy7G02316' => 'aox', 'Aqoxy7G03973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.12AFKW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B8730' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27IQR1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3F75VG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3RE0GA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41TCQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.527VTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FIR39' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5W8UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DA38EV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ63HS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H1I32C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HC27T5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4M8AP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7N3CZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9UVDZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LS1NQA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT1D4B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SKC4TM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCFV76' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF9Q1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQWD9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1ZM88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WE07RT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YCK7VH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJE6Q6' => 'arhy', 'AT1G28240' => 'ath', 'AT1G34550' => 'ath', 'AT1G53040' => 'ath', 'AT2G02910' => 'ath', 'AT4G09630' => 'ath', 'AT4G38500' => 'ath', 'AT5G42660' => 'ath', 'AT5G46220' => 'ath', 'ATR0152G026' => 'atr', 'ATR0564G343' => 'atr', 'ATR0706G151' => 'atr', 'ATR0733G207' => 'atr', 'ATR0751G234' => 'atr', 'ATR0807G048' => 'atr', 'ATR1091G084' => 'atr', 'Atru.chr10.1229' => 'acertr', 'Atru.chr10.1230' => 'acertr', 'Atru.chr10.1874' => 'acertr', 'Atru.chr11.1808' => 'acertr', 'Atru.chr13.1795' => 'acertr', 'Atru.chr13.570' => 'acertr', 'Atru.chr2.2608' => 'acertr', 'Atru.chr2.2609' => 'acertr', 'Atru.chr5.3428' => 'acertr', 'Atru.chr8.1171' => 'acertr', 'AUR62004651' => 'cqu', 'AUR62008675' => 'cqu', 'AUR62010014' => 'cqu', 'AUR62013004' => 'cqu', 'AUR62014825' => 'cqu', 'AUR62015015' => 'cqu', 'AUR62015151' => 'cqu', 'AUR62017020' => 'cqu', 'AUR62019422' => 'cqu', 'AUR62023570' => 'cqu', 'AUR62025571' => 'cqu', 'AUR62029098' => 'cqu', 'AUR62033863' => 'cqu', 'AUR62034296' => 'cqu', 'AUR62040075' => 'cqu', 'BcaB02g07334' => 'bca', 'BcaB02g10575' => 'bca', 'BcaB03g12119' => 'bca', 'BcaB03g12120' => 'bca', 'BcaB03g13945' => 'bca', 'BcaB04g17123' => 'bca', 'BcaB04g17867' => 'bca', 'BcaB04g19839' => 'bca', 'BcaB07g30317' => 'bca', 'BcaB07g32432' => 'bca', 'BcaB07g33362' => 'bca', 'BcaB08g36611' => 'bca', 'BcaC01g00028' => 'bca', 'BcaC01g01356' => 'bca', 'BcaC01g02034' => 'bca', 'BcaC01g06051' => 'bca', 'BcaC03g16839' => 'bca', 'BcaC03g17176' => 'bca', 'BcaC05g26829' => 'bca', 'BcaC06g31490' => 'bca', 'BcaC06g35344' => 'bca', 'BcaC06g36570' => 'bca', 'BcaC07g37537' => 'bca', 'BcaC08g43491' => 'bca', 'BcaC08g43773' => 'bca', 'BcaNung00234' => 'bca', 'BcaNung01982' => 'bca', 'BcaNung03707' => 'bca', 'BcaNung06454' => 'bca', 'BolC2t10762H' => 'bol', 'BolC2t11191H' => 'bol', 'BolC3t14322H' => 'bol', 'BolC3t19747H' => 'bol', 'BolC3t21425H' => 'bol', 'BolC4t27800H' => 'bol', 'BolC5t31423H' => 'bol', 'BolC6t35951H' => 'bol', 'BolC6t36282H' => 'bol', 'BolC7t40678H' => 'bol', 'BolC7t40679H' => 'bol', 'BolC7t42222H' => 'bol', 'BolC7t43492H' => 'bol', 'BolC7t46785H' => 'bol', 'BolC8t47853H' => 'bol', 'BolC9t56805H' => 'bol', 'BraA02t08000Z' => 'bra', 'BraA02t08341Z' => 'bra', 'BraA03t10936Z' => 'bra', 'BraA03t15657Z' => 'bra', 'BraA04t18100Z' => 'bra', 'BraA05t20523Z' => 'bra', 'BraA06t23353Z' => 'bra', 'BraA06t27473Z' => 'bra', 'BraA06t27769Z' => 'bra', 'BraA07t28928Z' => 'bra', 'BraA08t32236Z' => 'bra', 'BraA08t32841Z' => 'bra', 'BraA08t34524Z' => 'bra', 'BraA09t38742Z' => 'bra', 'BraA09t39295Z' => 'bra', 'C02p47180' => 'bna', 'C02p50990' => 'bna', 'C03p19360' => 'bna', 'C03p74950' => 'bna', 'C03p91000' => 'bna', 'C04p63260' => 'bna', 'C05p27050' => 'bna', 'C06p08750' => 'bna', 'C06p11490' => 'bna', 'C07p02820' => 'bna', 'C07p17180' => 'bna', 'C07p29440' => 'bna', 'C07p63730' => 'bna', 'C09p39260' => 'bna', 'CAN.G1164.34' => 'can', 'CAN.G1164.39' => 'can', 'CAN.G1530.3' => 'can', 'CAN.G162.61' => 'can', 'CAN.G176.6' => 'can', 'CAN.G289.49' => 'can', 'CAN.G370.21' => 'can', 'CAN.G370.22' => 'can', 'CAN.G371.117' => 'can', 'CAN.G58.37' => 'can', 'CAN.G588.98' => 'can', 'CANSAT21G2266' => 'cansat', 'CANSAT25G2799' => 'cansat', 'CANSAT35G0862' => 'cansat', 'CANSAT35G1704' => 'cansat', 'CANSAT35G1760' => 'cansat', 'CANSAT56G3971' => 'cansat', 'CANSAT56G4116' => 'cansat', 'CANSAT80G1259' => 'cansat', 'CARHR027730' => 'chi', 'CARHR033880' => 'chi', 'CARHR043270' => 'chi', 'CARHR145330' => 'chi', 'CARHR145340' => 'chi', 'CARHR175570' => 'chi', 'CARHR181570' => 'chi', 'CARHR258470' => 'chi', 'CARHR260490' => 'chi', 'CARHR294220' => 'chi', 'Carub.0001s2668' => 'cru', 'Carub.0001s3257' => 'cru', 'Carub.0001s4220' => 'cru', 'Carub.0005s0179' => 'cru', 'Carub.0006s2807' => 'cru', 'Carub.0007s0039' => 'cru', 'Carub.0008s0169' => 'cru', 'Carub.0008s0636' => 'cru', 'Ca_00338_v3' => 'car', 'Ca_00542_v3' => 'car', 'Ca_01844_v3' => 'car', 'Ca_10611_v3' => 'car', 'Ca_13326_v3' => 'car', 'Ca_17944_v3' => 'car', 'Ca_18546_v3' => 'car', 'Ca_24219_v3' => 'car', 'Ca_29972_v3' => 'car', 'CBR_g3681' => 'cbr', 'CBR_g40021' => 'cbr', 'Cc01_g08140' => 'ccan', 'Cc02_g13410' => 'ccan', 'Cc02_g37480' => 'ccan', 'Cc05_g12030' => 'ccan', 'Cc09_g03370' => 'ccan', 'Cc09_g10300' => 'ccan', 'Cc10_g03530' => 'ccan', 'Cc10_g11380' => 'ccan', 'CDE01G0176' => 'cde', 'CDE02G0675' => 'cde', 'CDE02G0942' => 'cde', 'CDE02G1153' => 'cde', 'CDE02G4177' => 'cde', 'CDE04G2117' => 'cde', 'CDE04G2736' => 'cde', 'CDE08G1161' => 'cde', 'CDE09G1238' => 'cde', 'Cfa000467' => 'cfa', 'Cfa000947' => 'cfa', 'Cfa004969' => 'cfa', 'Cfa005284' => 'cfa', 'Cfa008993' => 'cfa', 'Cfa018187' => 'cfa', 'Cfa018454' => 'cfa', 'Cfa020585' => 'cfa', 'Ciclev10000424m.g' => 'ccl', 'Ciclev10003605m.g' => 'ccl', 'Ciclev10007828m.g' => 'ccl', 'Ciclev10014620m.g' => 'ccl', 'Ciclev10015169m.g' => 'ccl', 'Ciclev10018291m.g' => 'ccl', 'Ciclev10028256m.g' => 'ccl', 'Ciclev10033822m.g' => 'ccl', 'CiPaw.05G060300' => 'cil', 'CiPaw.05G085000' => 'cil', 'CiPaw.06G083700' => 'cil', 'CiPaw.06G120300' => 'cil', 'CiPaw.09G060500' => 'cil', 'CiPaw.09G123800' => 'cil', 'CiPaw.11G169700' => 'cil', 'CiPaw.12G118300' => 'cil', 'CiPaw.15G071000' => 'cil', 'CiPaw.15G081900' => 'cil', 'ClCG01G024610' => 'cla', 'ClCG03G006070' => 'cla', 'ClCG05G019250' => 'cla', 'ClCG09G009500' => 'cla', 'ClCG11G008200' => 'cla', 'ClCG11G018080' => 'cla', 'COL.COLO4_17373' => 'col', 'COL.COLO4_22994' => 'col', 'COL.COLO4_26389' => 'col', 'COL.COLO4_27170' => 'col', 'COL.COLO4_31074' => 'col', 'COL.COLO4_31465' => 'col', 'COL.COLO4_36438' => 'col', 'COL.COLO4_36439' => 'col', 'Cpa.g.c38781' => 'cpa', 'Cpa.g.sc128.12' => 'cpa', 'Cpa.g.sc166.7' => 'cpa', 'Cpa.g.sc166.8' => 'cpa', 'Cpa.g.sc20.111' => 'cpa', 'Cpa.g.sc27.31' => 'cpa', 'Cpa.g.sc64.36' => 'cpa', 'Cpa.g.sc64.37' => 'cpa', 'Cpa.g.sc66.49' => 'cpa', 'Cpa.g.sc80.64' => 'cpa', 'CsaV3_1G012320' => 'csa', 'CsaV3_2G008480' => 'csa', 'CsaV3_2G033450' => 'csa', 'CsaV3_3G044830' => 'csa', 'CsaV3_4G033710' => 'csa', 'CsaV3_6G051730' => 'csa', 'CsaV3_7G025350' => 'csa', 'CSS0001067' => 'camsi', 'CSS0005996' => 'camsi', 'CSS0006590' => 'camsi', 'CSS0009673' => 'camsi', 'CSS0010201' => 'camsi', 'CSS0010549' => 'camsi', 'CSS0011364' => 'camsi', 'CSS0014473' => 'camsi', 'CSS0014961' => 'camsi', 'CSS0020191' => 'camsi', 'CSS0021165' => 'camsi', 'CSS0022306' => 'camsi', 'CSS0030591' => 'camsi', 'CSS0030696' => 'camsi', 'CSS0032653' => 'camsi', 'CSS0037487' => 'camsi', 'CSS0041102' => 'camsi', 'CSS0041261' => 'camsi', 'CSS0046246' => 'camsi', 'CSS0049256' => 'camsi', 'DCAR_004075' => 'dca', 'DCAR_011538' => 'dca', 'DCAR_019553' => 'dca', 'DCAR_020952' => 'dca', 'DCAR_021739' => 'dca', 'DCAR_027407' => 'dca', 'DCAR_027913' => 'dca', 'DCAR_028066' => 'dca', 'Dinv05899' => 'din', 'Dinv07563' => 'din', 'Dinv08010' => 'din', 'Dinv14125' => 'din', 'Dinv20172' => 'din', 'Dinv30743' => 'din', 'Dinv31229' => 'din', 'Dinv34162' => 'din', 'Dinv36028' => 'din', 'Dinv39368' => 'din', 'Dinv40565' => 'din', 'Dinv41706' => 'din', 'Duzib052G0089' => 'dzi', 'Duzib116G0641' => 'dzi', 'Duzib132G0069' => 'dzi', 'Duzib132G1219' => 'dzi', 'Duzib147G0278' => 'dzi', 'Duzib160G0480' => 'dzi', 'Duzib170G0661' => 'dzi', 'Duzib177G0591' => 'dzi', 'Duzib187G1353' => 'dzi', 'Duzib192G0858' => 'dzi', 'Duzib192G0883' => 'dzi', 'Duzib213G0506' => 'dzi', 'Duzib235G0289' => 'dzi', 'Duzib251G0422' => 'dzi', 'ECA232G3898' => 'eca', 'ECA233G5950' => 'eca', 'ECA234G1699' => 'eca', 'ECA234G2421' => 'eca', 'ECA236G0426' => 'eca', 'ECA236G4331' => 'eca', 'ECA248G2573' => 'eca', 'EL10Ac1g00077' => 'bvu', 'EL10Ac1g01746' => 'bvu', 'EL10Ac2g03464' => 'bvu', 'EL10Ac4g08176' => 'bvu', 'EL10Ac7g17521' => 'bvu', 'EL10Ac8g20386' => 'bvu', 'EL10Ac9g21343' => 'bvu', 'EL10Ac9g22688' => 'bvu', 'Eucgr.B03434' => 'egr', 'Eucgr.D00618' => 'egr', 'Eucgr.E02395' => 'egr', 'Eucgr.F01129' => 'egr', 'Eucgr.F02622' => 'egr', 'Eucgr.F04207' => 'egr', 'FAN01G0570' => 'fan', 'FAN03G3351' => 'fan', 'FAN06G3702' => 'fan', 'FAN07G2149' => 'fan', 'FAN10G3758' => 'fan', 'FAN11G1170' => 'fan', 'FAN11G2050' => 'fan', 'FAN11G2724' => 'fan', 'FAN12G1700' => 'fan', 'FAN12G2028' => 'fan', 'FAN15G1160' => 'fan', 'FAN15G3063' => 'fan', 'FAN16G2540' => 'fan', 'FAN16G3077' => 'fan', 'FAN16G3624' => 'fan', 'FAN17G0221' => 'fan', 'FAN20G2492' => 'fan', 'FAN20G2905' => 'fan', 'FAN21G0548' => 'fan', 'FAN21G1300' => 'fan', 'FAN22G0077' => 'fan', 'FAN22G1315' => 'fan', 'FAN24G1280' => 'fan', 'FAN24G1445' => 'fan', 'FAN24G3527' => 'fan', 'FAN25G0464' => 'fan', 'FAN25G2885' => 'fan', 'FAN25G3270' => 'fan', 'FAN27G1101' => 'fan', 'FAN27G2846' => 'fan', 'FAN27G3524' => 'fan', 'FvH4_2g11770' => 'fve', 'FvH4_2g15630' => 'fve', 'FvH4_3g05570' => 'fve', 'FvH4_3g09110' => 'fve', 'FvH4_3g19940' => 'fve', 'FvH4_4g04821' => 'fve', 'FvH4_4g31480' => 'fve', 'FvH4_7g01740' => 'fve', 'Glyma.05G130400' => 'gma', 'Glyma.05G156400' => 'gma', 'Glyma.07G197000' => 'gma', 'Glyma.08G085151' => 'gma', 'Glyma.08G114500' => 'gma', 'Glyma.08G300400' => 'gma', 'Glyma.10G215800' => 'gma', 'Glyma.12G224400' => 'gma', 'Glyma.13G179300' => 'gma', 'Glyma.13G218151' => 'gma', 'Glyma.13G238800' => 'gma', 'Glyma.13G276900' => 'gma', 'Glyma.14G078200' => 'gma', 'Glyma.15G074500' => 'gma', 'Glyma.15G094100' => 'gma', 'Glyma.17G247200' => 'gma', 'Glyma.18G120100' => 'gma', 'Glyma.20G176000' => 'gma', 'Gohir.A01G063600' => 'ghi', 'Gohir.A01G170301' => 'ghi', 'Gohir.A02G060500' => 'ghi', 'Gohir.A05G133850' => 'ghi', 'Gohir.A05G161400' => 'ghi', 'Gohir.A06G012900' => 'ghi', 'Gohir.A06G035901' => 'ghi', 'Gohir.A06G127100' => 'ghi', 'Gohir.A06G210500' => 'ghi', 'Gohir.A08G008650' => 'ghi', 'Gohir.A09G072700' => 'ghi', 'Gohir.A09G088301' => 'ghi', 'Gohir.A10G040600' => 'ghi', 'Gohir.A12G036300' => 'ghi', 'Gohir.A12G143350' => 'ghi', 'Gohir.A12G165500' => 'ghi', 'Gohir.A13G145700' => 'ghi', 'Gohir.D01G050000' => 'ghi', 'Gohir.D01G051366' => 'ghi', 'Gohir.D01G161350' => 'ghi', 'Gohir.D02G065900' => 'ghi', 'Gohir.D05G164200' => 'ghi', 'Gohir.D05G355500' => 'ghi', 'Gohir.D06G010400' => 'ghi', 'Gohir.D06G111250' => 'ghi', 'Gohir.D06G132000' => 'ghi', 'Gohir.D06G210500' => 'ghi', 'Gohir.D07G165675' => 'ghi', 'Gohir.D08G062240' => 'ghi', 'Gohir.D08G086101' => 'ghi', 'Gohir.D08G138060' => 'ghi', 'Gohir.D09G072300' => 'ghi', 'Gohir.D10G041400' => 'ghi', 'Gohir.D11G191020' => 'ghi', 'Gohir.D11G212066' => 'ghi', 'Gohir.D12G036300' => 'ghi', 'Gohir.D12G168600' => 'ghi', 'Gohir.D13G150600' => 'ghi', 'Gorai.001G057300' => 'gra', 'Gorai.002G069900' => 'gra', 'Gorai.002G200000' => 'gra', 'Gorai.003G067600' => 'gra', 'Gorai.005G074800' => 'gra', 'Gorai.006G087300' => 'gra', 'Gorai.008G037500' => 'gra', 'Gorai.008G181400' => 'gra', 'Gorai.009G169400' => 'gra', 'Gorai.009G387900' => 'gra', 'Gorai.010G013300' => 'gra', 'Gorai.010G153800' => 'gra', 'Gorai.010G255800' => 'gra', 'Gorai.011G043700' => 'gra', 'Gorai.011G198900' => 'gra', 'Gorai.013G168400' => 'gra', 'GSVIVG01005212001' => 'vvi', 'GSVIVG01006163001' => 'vvi', 'GSVIVG01009625001' => 'vvi', 'GSVIVG01014338001' => 'vvi', 'GSVIVG01020005001' => 'vvi', 'GSVIVG01021450001' => 'vvi', 'GSVIVG01023975001' => 'vvi', 'GSVIVG01034490001' => 'vvi', 'HanXRQChr04g0112071' => 'han', 'HanXRQChr05g0131151' => 'han', 'HanXRQChr09g0262371' => 'han', 'HanXRQChr09g0268401' => 'han', 'HanXRQChr10g0279241' => 'han', 'HanXRQChr10g0297961' => 'han', 'HanXRQChr11g0326231' => 'han', 'HanXRQChr11g0328471' => 'han', 'HanXRQChr16g0507941' => 'han', 'HanXRQChr17g0560211' => 'han', 'Haze_02108' => 'cav', 'Haze_02428' => 'cav', 'Haze_05593' => 'cav', 'Haze_06448' => 'cav', 'Haze_09427' => 'cav', 'Haze_12022' => 'cav', 'Haze_17612' => 'cav', 'Haze_17928' => 'cav', 'Hma1.2p1_0032F.1_g019250' => 'hma', 'Hma1.2p1_0163F.1_g072690' => 'hma', 'Hma1.2p1_0265F.1_g106710' => 'hma', 'Hma1.2p1_0286F.1_g113970' => 'hma', 'Hma1.2p1_0363F.1_g136640' => 'hma', 'Hma1.2p1_0584F.1_g183470' => 'hma', 'Hma1.2p1_0885F.1_g232570' => 'hma', 'HPP92_006022' => 'vpl', 'HPP92_007320' => 'vpl', 'HPP92_011521' => 'vpl', 'HPP92_019387' => 'vpl', 'HPP92_024038' => 'vpl', 'Hund05891' => 'sun', 'Hund06450' => 'sun', 'Hund12053' => 'sun', 'Hund16800' => 'sun', 'Hund21222' => 'sun', 'Hund22896' => 'sun', 'Hund23746' => 'sun', 'Hund27083' => 'sun', 'Lalb_Chr02g0141831' => 'lal', 'Lalb_Chr02g0141841' => 'lal', 'Lalb_Chr05g0220411' => 'lal', 'Lalb_Chr06g0162081' => 'lal', 'Lalb_Chr09g0327651' => 'lal', 'Lalb_Chr13g0295051' => 'lal', 'Lalb_Chr15g0086801' => 'lal', 'Lalb_Chr16g0383781' => 'lal', 'Lalb_Chr16g0383791' => 'lal', 'Lalb_Chr18g0055441' => 'lal', 'Lalb_Chr18g0059611' => 'lal', 'Lalb_Chr20g0109661' => 'lal', 'Lalb_Chr20g0109831' => 'lal', 'Lalb_Chr20g0121871' => 'lal', 'Lalb_Chr22g0355361' => 'lal', 'Lalb_Chr25g0286371' => 'lal', 'Lj1A1187G43' => 'lonja', 'Lj1A1205T50' => 'lonja', 'Lj1A800G33' => 'lonja', 'Lj1C1187T7' => 'lonja', 'Lj1C843T11' => 'lonja', 'Lj1g0010940' => 'lja', 'Lj2A288T69' => 'lonja', 'Lj3g0024276' => 'lja', 'Lj4A47T76' => 'lonja', 'Lj4g0005805' => 'lja', 'Lj4g0006097' => 'lja', 'Lj4g0008528' => 'lja', 'Lj4g0024907' => 'lja', 'Lj5g0012472' => 'lja', 'Lj5g0018648' => 'lja', 'Lj6C789G1' => 'lonja', 'Lj6g0004000' => 'lja', 'Lj7A292G67' => 'lonja', 'Lj7A292T64' => 'lonja', 'Lj9A400T58' => 'lonja', 'Lsat_1_v5_gn_1_126181' => 'lsa', 'Lsat_1_v5_gn_4_123041' => 'lsa', 'Lsat_1_v5_gn_4_133620' => 'lsa', 'Lsat_1_v5_gn_4_53221' => 'lsa', 'Lsat_1_v5_gn_4_71961' => 'lsa', 'Lsat_1_v5_gn_7_105241' => 'lsa', 'Lsat_1_v5_gn_7_21361' => 'lsa', 'Lsat_1_v5_gn_7_28860' => 'lsa', 'Lsat_1_v5_gn_7_31260' => 'lsa', 'Lsat_1_v5_gn_8_52801' => 'lsa', 'Manes.02G191400' => 'mes', 'Manes.03G110100' => 'mes', 'Manes.04G071100' => 'mes', 'Manes.05G100500' => 'mes', 'Manes.05G164700' => 'mes', 'Manes.15G087000' => 'mes', 'Manes.15G121500' => 'mes', 'Manes.16G028300' => 'mes', 'Manes.17G046100' => 'mes', 'Manes.17G069800' => 'mes', 'Manes.18G100500' => 'mes', 'Mapoly0002s0109' => 'mpo', 'Mapoly0024s0007' => 'mpo', 'Mapoly0089s0032' => 'mpo', 'MBI04_g42241_MAGBIO' => 'mbi', 'MBI05_g11988_MAGBIO' => 'mbi', 'MBI05_g35452_MAGBIO' => 'mbi', 'MBI07_g30179_MAGBIO' => 'mbi', 'MBI07_g35859_MAGBIO' => 'mbi', 'MBI07_g35860_MAGBIO' => 'mbi', 'MBI07_g37166_MAGBIO' => 'mbi', 'MBI08_g18172_MAGBIO' => 'mbi', 'MBI09_g08441_MAGBIO' => 'mbi', 'MBI13_g01676_MAGBIO' => 'mbi', 'MBI14_g42955_MAGBIO' => 'mbi', 'MBI16_g13161_MAGBIO' => 'mbi', 'MBI17_g27204_MAGBIO' => 'mbi', 'MBI19_g21595_MAGBIO' => 'mbi', 'MD00G1148400' => 'mdo', 'MD02G1301200' => 'mdo', 'MD03G1227800' => 'mdo', 'MD05G1041100' => 'mdo', 'MD05G1124800' => 'mdo', 'MD05G1284000' => 'mdo', 'MD05G1338800' => 'mdo', 'MD05G1338900' => 'mdo', 'MD07G1022800' => 'mdo', 'MD10G1047500' => 'mdo', 'MD10G1127500' => 'mdo', 'MD10G1262300' => 'mdo', 'MD10G1293800' => 'mdo', 'MD16G1074300' => 'mdo', 'Medtr1g021670' => 'mtr', 'Medtr1g096320' => 'mtr', 'Medtr2g013690' => 'mtr', 'Medtr2g019450' => 'mtr', 'Medtr2g085170' => 'mtr', 'Medtr4g088785' => 'mtr', 'Medtr8g055930' => 'mtr', 'Medtr8g085850' => 'mtr', 'MELO3C002605.2' => 'cme', 'MELO3C003891.2' => 'cme', 'MELO3C004012.2' => 'cme', 'MELO3C007134.2' => 'cme', 'MELO3C008118.2' => 'cme', 'MELO3C016700.2' => 'cme', 'MELO3C024127.2' => 'cme', 'MELO3C033361.2' => 'cme', 'MELO3C033362.2' => 'cme', 'Migut.C00430' => 'egut', 'Migut.C01246' => 'egut', 'Migut.E00101' => 'egut', 'Migut.H01486' => 'egut', 'Migut.H01939' => 'egut', 'Migut.K00360' => 'egut', 'Migut.M00910' => 'egut', 'Migut.M01139' => 'egut', 'Migut.N02677' => 'egut', 'MSTRG.13252' => 'ama', 'MSTRG.14701' => 'ama', 'MSTRG.1521' => 'ama', 'MSTRG.15884' => 'ama', 'MSTRG.16242' => 'ama', 'MSTRG.22285' => 'ama', 'MSTRG.22444' => 'ama', 'MSTRG.2349' => 'ama', 'MSTRG.26308' => 'ama', 'MSTRG.28296' => 'ama', 'MSTRG.9895' => 'ama', 'Nitab4.5_0000110g0060' => 'nta', 'Nitab4.5_0000420g0130' => 'nta', 'Nitab4.5_0000422g0030' => 'nta', 'Nitab4.5_0000560g0180' => 'nta', 'Nitab4.5_0000703g0100' => 'nta', 'Nitab4.5_0000786g0200' => 'nta', 'Nitab4.5_0001336g0020' => 'nta', 'Nitab4.5_0001796g0030' => 'nta', 'Nitab4.5_0003348g0060' => 'nta', 'Nitab4.5_0003698g0040' => 'nta', 'Nitab4.5_0003942g0090' => 'nta', 'Nitab4.5_0004775g0070' => 'nta', 'Nitab4.5_0004864g0030' => 'nta', 'Nitab4.5_0005615g0020' => 'nta', 'Nitab4.5_0009288g0030' => 'nta', 'Nitab4.5_0009341g0010' => 'nta', 'Nitab4.5_0009535g0010' => 'nta', 'Nn1g03995' => 'nnu', 'Nn1g04100' => 'nnu', 'Nn1g06530' => 'nnu', 'Nn3g16404' => 'nnu', 'Nn3g17212' => 'nnu', 'Nn3g20776' => 'nnu', 'Nn3g21923' => 'nnu', 'Nn5g27737' => 'nnu', 'Nn5g29461' => 'nnu', 'Nn7g38355' => 'nnu', 'Nn8g39873' => 'nnu', 'Oeu000548.2' => 'oeu', 'Oeu004672.1' => 'oeu', 'Oeu015605.2' => 'oeu', 'Oeu016092.1' => 'oeu', 'Oeu017879.3' => 'oeu', 'Oeu024910.1' => 'oeu', 'Oeu028965.1' => 'oeu', 'Oeu031269.1' => 'oeu', 'Oeu031270.1' => 'oeu', 'Oeu032535.1' => 'oeu', 'Oeu034151.1' => 'oeu', 'Oeu034152.1' => 'oeu', 'Oeu034588.2' => 'oeu', 'Oeu050846.1' => 'oeu', 'Oeu050849.2' => 'oeu', 'Oeu051063.2' => 'oeu', 'Oeu052368.1' => 'oeu', 'Oeu052370.1' => 'oeu', 'Os01g0210400' => 'osa', 'Os01g0304300' => 'osa', 'Os01g0749100' => 'osa', 'Os02g0745800' => 'osa', 'Os03g0769050' => 'osa', 'Os05g0531500' => 'osa', 'Os06g0724300' => 'osa', 'Os11g0198100' => 'osa', 'Peaxi162Scf00069g01425' => 'pax', 'Peaxi162Scf00280g00811' => 'pax', 'Peaxi162Scf00310g00615' => 'pax', 'Peaxi162Scf00362g00542' => 'pax', 'Peaxi162Scf00461g00310' => 'pax', 'Peaxi162Scf00530g00118' => 'pax', 'Peaxi162Scf00541g00057' => 'pax', 'Peaxi162Scf00661g00017' => 'pax', 'Peaxi162Scf00926g00027' => 'pax', 'Peaxi162Scf01064g00263' => 'pax', 'Peaxi162Scf01211g00135' => 'pax', 'PGR004G2336' => 'pgr', 'PGR042G0327' => 'pgr', 'PGR042G1957' => 'pgr', 'PGR042G2003' => 'pgr', 'PGR042G3929' => 'pgr', 'PGR083G1137' => 'pgr', 'PGR083G1364' => 'pgr', 'PGSC0003DMG400003381' => 'stu', 'PGSC0003DMG400003417' => 'stu', 'PGSC0003DMG400008981' => 'stu', 'PGSC0003DMG400012417' => 'stu', 'PGSC0003DMG400012823' => 'stu', 'PGSC0003DMG400016885' => 'stu', 'PGSC0003DMG400022812' => 'stu', 'PGSC0003DMG400029726' => 'stu', 'PGSC0003DMG401009243' => 'stu', 'PGSC0003DMG401031505' => 'stu', 'PGSC0003DMG402031505' => 'stu', 'Phvul.001G017600' => 'pvu', 'Phvul.002G193500' => 'pvu', 'Phvul.002G228900' => 'pvu', 'Phvul.002G236800' => 'pvu', 'Phvul.003G049500' => 'pvu', 'Phvul.005G072000' => 'pvu', 'Phvul.006G164800' => 'pvu', 'Phvul.006G185100' => 'pvu', 'Phvul.007G090000' => 'pvu', 'Potri.001G399800' => 'ptr', 'Potri.002G149900' => 'ptr', 'Potri.004G044100' => 'ptr', 'Potri.004G177600' => 'ptr', 'Potri.009G138000' => 'ptr', 'Potri.010G094000' => 'ptr', 'Potri.011G053000' => 'ptr', 'Potri.011G119300' => 'ptr', 'Potri.013G113700' => 'ptr', 'Potri.018G107800' => 'ptr', 'Potri.019G084100' => 'ptr', 'Pp3c14_23720' => 'ppa', 'Pp3c16_6340' => 'ppa', 'Pp3c23_13420' => 'ppa', 'Pp3c24_2740' => 'ppa', 'Pp3c25_860' => 'ppa', 'Pp3c8_21750' => 'ppa', 'Prupe.1G273000' => 'ppe', 'Prupe.1G273700' => 'ppe', 'Prupe.1G274100' => 'ppe', 'Prupe.2G023300' => 'ppe', 'Prupe.4G048000' => 'ppe', 'Prupe.4G080400' => 'ppe', 'Prupe.4G181200' => 'ppe', 'Prupe.8G056900' => 'ppe', 'Prupe.8G168700' => 'ppe', 'Psat1g189080' => 'psa', 'Psat1g204760' => 'psa', 'Psat4g175560' => 'psa', 'Psat4g177720' => 'psa', 'Psat5g244240' => 'psa', 'Psat6g010720' => 'psa', 'Psat6g187200' => 'psa', 'Psat7g072040' => 'psa', 'PSO017G3501' => 'pso', 'PSO063G2148' => 'pso', 'PSO063G5608' => 'pso', 'PSO210G6392' => 'pso', 'PSO541G2319' => 'pso', 'PSO541G2836' => 'pso', 'PSO541G4012' => 'pso', 'PSO541G6253' => 'pso', 'PSO675G0580' => 'pso', 'PSO675G0856' => 'pso', 'PSO675G5635' => 'pso', 'PSO675G9157' => 'pso', 'PSO832G1660' => 'pso', 'PSO832G1969' => 'pso', 'QL02p007186' => 'qlo', 'QL02p033904' => 'qlo', 'QL03p064391' => 'qlo', 'QL05p040593' => 'qlo', 'QL05p058242' => 'qlo', 'QL08p021825' => 'qlo', 'QL11p004981' => 'qlo', 'RcHm_v2.0_Chr1g0318301' => 'rch', 'RcHm_v2.0_Chr4g0418501' => 'rch', 'RcHm_v2.0_Chr4g0439971' => 'rch', 'RcHm_v2.0_Chr5g0008541' => 'rch', 'RcHm_v2.0_Chr5g0014101' => 'rch', 'RcHm_v2.0_Chr5g0014131' => 'rch', 'RcHm_v2.0_Chr5g0033621' => 'rch', 'RcHm_v2.0_Chr6g0272041' => 'rch', 'RcHm_v2.0_Chr6g0278831' => 'rch', 'Rhsim02G0130400' => 'rsi', 'Rhsim02G0171100' => 'rsi', 'Rhsim05G0053000' => 'rsi', 'Rhsim05G0053100' => 'rsi', 'Rhsim06G0096500' => 'rsi', 'Rhsim06G0096600' => 'rsi', 'Rhsim06G0199100' => 'rsi', 'Rhsim12G0062300' => 'rsi', 'Rhsim12G0062800' => 'rsi', 'Sabra02G0118600' => 'sbr', 'Sabra04G0027300' => 'sbr', 'Sabra04G0119500' => 'sbr', 'Sabra08G0112500' => 'sbr', 'Sabra11G0036800' => 'sbr', 'Sabra11G0103800' => 'sbr', 'Sabra13G0096300' => 'sbr', 'Sabra16G0262300' => 'sbr', 'Sabra18G0091700' => 'sbr', 'Sabra19G0095400' => 'sbr', 'SalBow6G3080' => 'sbo', 'SalBow7G1157' => 'sbo', 'SalBow7G2123' => 'sbo', 'SalBow7G2285' => 'sbo', 'SalBow7G3537' => 'sbo', 'SalBow8G2947' => 'sbo', 'SalBow8G4463' => 'sbo', 'SalBow8G5466' => 'sbo', 'Sc01g0001750' => 'sci', 'Sc02g0006640' => 'sci', 'Sc02g0006670' => 'sci', 'Sc04g0008220' => 'sci', 'Sc05g0006190' => 'sci', 'Sc08g0002760' => 'sci', 'Sc17g0006170' => 'sci', 'Sc22g0002050' => 'sci', 'Sc23g0001190' => 'sci', 'Sc24g0000980' => 'sci', 'Sed0006245' => 'sed', 'Sed0007543' => 'sed', 'Sed0009411' => 'sed', 'Sed0010765' => 'sed', 'Sed0012944' => 'sed', 'Sed0014682' => 'sed', 'Sed0016174' => 'sed', 'Sed0016796' => 'sed', 'Sed0020317' => 'sed', 'Sed0021467' => 'sed', 'SEGI_01316' => 'sgi', 'SEGI_03374' => 'sgi', 'SEGI_16265' => 'sgi', 'SEGI_18569' => 'sgi', 'SEGI_20351' => 'sgi', 'SEGI_26395' => 'sgi', 'SEGI_29469' => 'sgi', 'SEGI_34771' => 'sgi', 'SEGI_36769' => 'sgi', 'SEGI_37139' => 'sgi', 'SGA_v2.0_scaffold100G29687' => 'sas', 'SGA_v2.0_scaffold118G32472' => 'sas', 'SGA_v2.0_scaffold14G07051' => 'sas', 'SGA_v2.0_scaffold183G39845' => 'sas', 'SGA_v2.0_scaffold1G00174' => 'sas', 'SGA_v2.0_scaffold22G09714' => 'sas', 'SGA_v2.0_scaffold333G48992' => 'sas', 'SGA_v2.0_scaffold46G17491' => 'sas', 'SGA_v2.0_scaffold49G18294' => 'sas', 'SGA_v2.0_scaffold63G21658' => 'sas', 'SHI01741' => 'shi', 'SHI05771' => 'shi', 'SHI18077' => 'shi', 'SHI20525' => 'shi', 'SHI20527' => 'shi', 'SHI20528' => 'shi', 'SMO172G0185' => 'smo', 'SMO198G0020' => 'smo', 'SMO351G0006' => 'smo', 'SMO356G0118' => 'smo', 'SMO358G0296' => 'smo', 'SMO367G0079' => 'smo', 'SMO367G1277' => 'smo', 'Solyc01g014220.3' => 'sly', 'Solyc01g111770.2' => 'sly', 'Solyc02g078180.3' => 'sly', 'Solyc03g006430.3' => 'sly', 'Solyc03g006456.1' => 'sly', 'Solyc03g079860.2' => 'sly', 'Solyc04g079770.3' => 'sly', 'Solyc05g007430.4' => 'sly', 'Solyc07g063150.3' => 'sly', 'Solyc08g016620.3' => 'sly', 'Solyc09g057590.3' => 'sly', 'Solyc09g057600.1' => 'sly', 'Solyc10g009050.3' => 'sly', 'Solyc11g017420.2' => 'sly', 'Sopen01g053810' => 'spe', 'Sopen02g023040' => 'spe', 'Sopen03g002440' => 'spe', 'Sopen04g033350' => 'spe', 'Sopen05g003310' => 'spe', 'Sopen07g004050' => 'spe', 'Sopen07g031340' => 'spe', 'Sopen08g006990' => 'spe', 'Sopen10g004830' => 'spe', 'Sopen11g009370' => 'spe', 'Sp1g24450' => 'spa', 'Sp1g29670' => 'spa', 'Sp1g39600' => 'spa', 'Sp2g11080' => 'spa', 'Sp2g13970' => 'spa', 'Sp4g16130' => 'spa', 'Sp6g13080' => 'spa', 'Sp7g37270' => 'spa', 'TAR371G0065' => 'tar', 'TAR376G0340' => 'tar', 'TAR376G0435' => 'tar', 'TAR381G0002' => 'tar', 'TAR381G1236' => 'tar', 'TAR624G0055' => 'tar', 'TAR624G0324' => 'tar', 'TAR624G0696' => 'tar', 'TAR624G0906' => 'tar', 'TAR625G0107' => 'tar', 'TAR626G0015' => 'tar', 'TAR626G1356' => 'tar', 'TAR627G0888' => 'tar', 'TAR628G0399' => 'tar', 'TAR628G1327' => 'tar', 'TAR629G2831' => 'tar', 'TAR629G2874' => 'tar', 'TAR633G1432' => 'tar', 'TAR633G2771' => 'tar', 'THA.LOC104803394' => 'tha', 'THA.LOC104805153' => 'tha', 'THA.LOC104806784' => 'tha', 'THA.LOC104810473' => 'tha', 'THA.LOC104813100' => 'tha', 'THA.LOC104814215' => 'tha', 'THA.LOC104815554' => 'tha', 'THA.LOC104820544' => 'tha', 'THA.LOC104824754' => 'tha', 'THA.LOC104827717' => 'tha', 'Thecc.02G031400' => 'tca', 'Thecc.02G055900' => 'tca', 'Thecc.02G350800' => 'tca', 'Thecc.06G150900' => 'tca', 'Thecc.06G186600' => 'tca', 'Thecc.07G089600' => 'tca', 'Thecc.08G020400' => 'tca', 'Thecc.08G182100' => 'tca', 'Thhalv10000873m.g' => 'esa', 'Thhalv10004185m.g' => 'esa', 'Thhalv10006981m.g' => 'esa', 'Thhalv10007204m.g' => 'esa', 'Thhalv10011374m.g' => 'esa', 'Thhalv10013482m.g' => 'esa', 'Thhalv10017801m.g' => 'esa', 'Thhalv10024983m.g' => 'esa', 'TPR.G12072' => 'tpr', 'TPR.G15769' => 'tpr', 'TPR.G16504' => 'tpr', 'TPR.G16506' => 'tpr', 'TPR.G24345' => 'tpr', 'TPR.G26666' => 'tpr', 'TPR.G27320' => 'tpr', 'TPR.G31819' => 'tpr', 'TPR.G38879' => 'tpr', 'TPR.G39015' => 'tpr', 'TPR.G8819' => 'tpr', 'TWI09G0924' => 'twi', 'TWI12G0811' => 'twi', 'TWI12G1294' => 'twi', 'TWI31G0150' => 'twi', 'TWI36G1262' => 'twi', 'TWI38G1287' => 'twi', 'TWI38G1633' => 'twi', 'TWI38G1982' => 'twi', 'TWI39G0116' => 'twi', 'TWI60G1011' => 'twi', 'TWI63G0171' => 'twi', 'TWI73G0839' => 'twi', 'TWI79G1511' => 'twi', 'unitig_0.g915' => 'ugi', 'unitig_0.g916' => 'ugi', 'unitig_21.g20219' => 'ugi', 'unitig_21.g20416' => 'ugi', 'unitig_578.g16132' => 'ugi', 'unitig_578.g16718' => 'ugi', 'unitig_62.g23481' => 'ugi', 'unitig_744.g24535' => 'ugi', 'unitig_749.g13525' => 'ugi', 'vmacro01248' => 'vma', 'vmacro02290' => 'vma', 'vmacro10946' => 'vma', 'vmacro11865' => 'vma', 'vmacro12493' => 'vma', 'vmacro17322' => 'vma', 'vmacro21599' => 'vma', 'vmacro23041' => 'vma', 'VMungo0251G0004' => 'vmu', 'VMungo0251G2639' => 'vmu', 'VMungo0251G2967' => 'vmu', 'VMungo0540G0864' => 'vmu', 'VMungo0540G1569' => 'vmu', 'VMungo0647G0317' => 'vmu', 'VMungo0720G1373' => 'vmu', 'VMungo0720G1508' => 'vmu', 'VMungo1080G0485' => 'vmu', 'VMungo1215G3177' => 'vmu', 'Zm00001eb112600' => 'zma', 'Zm00001eb120220' => 'zma', 'Zm00001eb153240' => 'zma', 'Zm00001eb168880' => 'zma', 'Zm00001eb213920' => 'zma', 'Zm00001eb228280' => 'zma', 'Zm00001eb254580' => 'zma', 'Zm00001eb272180' => 'zma', 'Zm00001eb293190' => 'zma', 'Zm00001eb322930' => 'zma', 'Zm00001eb353360' => 'zma', 'Zm00001eb353390' => 'zma', 'Zm00001eb353430' => 'zma', 'Zm00001eb353440' => 'zma', 'Zm00001eb353780' => 'zma' ), 'gf_id' => 'HOM05D000499', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000499' ), 'data_identifier' => 'HOM05D000499', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000499', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1066', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p29780' => 'bna', 'A02p33180' => 'bna', 'A03p16470' => 'bna', 'A03p66010' => 'bna', 'A04p25970' => 'bna', 'A06p01270' => 'bna', 'A06p46080' => 'bna', 'A07p11400' => 'bna', 'A08p01840' => 'bna', 'A08p08230' => 'bna', 'A08p25740' => 'bna', 'A09p32070' => 'bna', 'A09p37830' => 'bna', 'A09p42840' => 'bna', 'A09p42850' => 'bna', 'Aa31LG10G2060' => 'aar', 'Aa31LG2G7410' => 'aar', 'Aa31LG6G10200' => 'aar', 'Aa31LG6G16680' => 'aar', 'Aa31LG6G8470' => 'aar', 'Aa31LG9G12730' => 'aar', 'Aa31LG9G13680' => 'aar', 'Aa31LG9G14920' => 'aar', 'Aa31LG9G6650' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4977' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5467' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3254' => 'aag', 'Actinidia02578' => 'ach', 'Actinidia07693' => 'ach', 'Actinidia08413' => 'ach', 'Actinidia08414' => 'ach', 'Actinidia15289' => 'ach', 'Actinidia19871' => 'ach', 'Actinidia21475' => 'ach', 'Actinidia22576' => 'ach', 'Actinidia28327' => 'ach', 'Actinidia32491' => 'ach', 'Actinidia39463' => 'ach', 'Actinidia39571' => 'ach', 'Ah.01g013750' => 'amhyb', 'Ah.01g023210' => 'amhyb', 'Ah.04g164850' => 'amhyb', 'Ah.05g178060' => 'amhyb', 'Ah.07g204270' => 'amhyb', 'Ah.07g208480' => 'amhyb', 'Ah.09g237410' => 'amhyb', 'Ah.14g089460' => 'amhyb', 'AL1G41790' => 'aly', 'AL1G49050' => 'aly', 'AL1G53810' => 'aly', 'AL1G61400' => 'aly', 'AL4G18580' => 'aly', 'AL5G12510' => 'aly', 'AL5G12540' => 'aly', 'AL6G43230' => 'aly', 'AL7G10370' => 'aly', 'AL7G19250' => 'aly', 'AL8G12240' => 'aly', 'AL8G18540' => 'aly', 'Aqoxy1G02409' => 'aox', 'Aqoxy2G03993' => 'aox', 'Aqoxy3G03357' => 'aox', 'Aqoxy4G00785' => 'aox', 'Aqoxy5G02598' => 'aox', 'Aqoxy6G00132' => 'aox', 'Aqoxy7G01776' => 'aox', 'Aqoxy7G02316' => 'aox', 'Aqoxy7G03973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.12AFKW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B8730' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27IQR1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3F75VG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3RE0GA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41TCQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.527VTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FIR39' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5W8UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DA38EV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ63HS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H1I32C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HC27T5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4M8AP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7N3CZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9UVDZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LS1NQA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT1D4B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SKC4TM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCFV76' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF9Q1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQWD9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1ZM88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WE07RT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YCK7VH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJE6Q6' => 'arhy', 'AT1G28240' => 'ath', 'AT1G34550' => 'ath', 'AT1G53040' => 'ath', 'AT2G02910' => 'ath', 'AT4G09630' => 'ath', 'AT4G38500' => 'ath', 'AT5G42660' => 'ath', 'AT5G46220' => 'ath', 'ATR0152G026' => 'atr', 'ATR0564G343' => 'atr', 'ATR0706G151' => 'atr', 'ATR0733G207' => 'atr', 'ATR0751G234' => 'atr', 'ATR0807G048' => 'atr', 'ATR1091G084' => 'atr', 'Atru.chr10.1229' => 'acertr', 'Atru.chr10.1230' => 'acertr', 'Atru.chr10.1874' => 'acertr', 'Atru.chr11.1808' => 'acertr', 'Atru.chr13.1795' => 'acertr', 'Atru.chr13.570' => 'acertr', 'Atru.chr2.2608' => 'acertr', 'Atru.chr2.2609' => 'acertr', 'Atru.chr5.3428' => 'acertr', 'Atru.chr8.1171' => 'acertr', 'AUR62004651' => 'cqu', 'AUR62008675' => 'cqu', 'AUR62010014' => 'cqu', 'AUR62013004' => 'cqu', 'AUR62014825' => 'cqu', 'AUR62015015' => 'cqu', 'AUR62015151' => 'cqu', 'AUR62017020' => 'cqu', 'AUR62019422' => 'cqu', 'AUR62023570' => 'cqu', 'AUR62025571' => 'cqu', 'AUR62029098' => 'cqu', 'AUR62033863' => 'cqu', 'AUR62034296' => 'cqu', 'AUR62040075' => 'cqu', 'BcaB02g07334' => 'bca', 'BcaB02g10575' => 'bca', 'BcaB03g12119' => 'bca', 'BcaB03g12120' => 'bca', 'BcaB03g13945' => 'bca', 'BcaB04g17123' => 'bca', 'BcaB04g17867' => 'bca', 'BcaB04g19839' => 'bca', 'BcaB07g30317' => 'bca', 'BcaB07g32432' => 'bca', 'BcaB07g33362' => 'bca', 'BcaB08g36611' => 'bca', 'BcaC01g00028' => 'bca', 'BcaC01g01356' => 'bca', 'BcaC01g02034' => 'bca', 'BcaC01g06051' => 'bca', 'BcaC03g16839' => 'bca', 'BcaC03g17176' => 'bca', 'BcaC05g26829' => 'bca', 'BcaC06g31490' => 'bca', 'BcaC06g35344' => 'bca', 'BcaC06g36570' => 'bca', 'BcaC07g37537' => 'bca', 'BcaC08g43491' => 'bca', 'BcaC08g43773' => 'bca', 'BcaNung00234' => 'bca', 'BcaNung01982' => 'bca', 'BcaNung03707' => 'bca', 'BcaNung06454' => 'bca', 'BolC2t10762H' => 'bol', 'BolC2t11191H' => 'bol', 'BolC3t14322H' => 'bol', 'BolC3t19747H' => 'bol', 'BolC3t21425H' => 'bol', 'BolC4t27800H' => 'bol', 'BolC5t31423H' => 'bol', 'BolC6t35951H' => 'bol', 'BolC6t36282H' => 'bol', 'BolC7t40678H' => 'bol', 'BolC7t40679H' => 'bol', 'BolC7t42222H' => 'bol', 'BolC7t43492H' => 'bol', 'BolC7t46785H' => 'bol', 'BolC8t47853H' => 'bol', 'BolC9t56805H' => 'bol', 'BraA02t08000Z' => 'bra', 'BraA02t08341Z' => 'bra', 'BraA03t10936Z' => 'bra', 'BraA03t15657Z' => 'bra', 'BraA04t18100Z' => 'bra', 'BraA05t20523Z' => 'bra', 'BraA06t23353Z' => 'bra', 'BraA06t27473Z' => 'bra', 'BraA06t27769Z' => 'bra', 'BraA07t28928Z' => 'bra', 'BraA08t32236Z' => 'bra', 'BraA08t32841Z' => 'bra', 'BraA08t34524Z' => 'bra', 'BraA09t38742Z' => 'bra', 'BraA09t39295Z' => 'bra', 'C02p47180' => 'bna', 'C02p50990' => 'bna', 'C03p19360' => 'bna', 'C03p74950' => 'bna', 'C03p91000' => 'bna', 'C04p63260' => 'bna', 'C05p27050' => 'bna', 'C06p08750' => 'bna', 'C06p11490' => 'bna', 'C07p02820' => 'bna', 'C07p17180' => 'bna', 'C07p29440' => 'bna', 'C07p63730' => 'bna', 'C09p39260' => 'bna', 'CAN.G1164.34' => 'can', 'CAN.G1164.39' => 'can', 'CAN.G1530.3' => 'can', 'CAN.G162.61' => 'can', 'CAN.G176.6' => 'can', 'CAN.G289.49' => 'can', 'CAN.G370.21' => 'can', 'CAN.G370.22' => 'can', 'CAN.G371.117' => 'can', 'CAN.G58.37' => 'can', 'CAN.G588.98' => 'can', 'CANSAT21G2266' => 'cansat', 'CANSAT25G2799' => 'cansat', 'CANSAT35G0862' => 'cansat', 'CANSAT35G1704' => 'cansat', 'CANSAT35G1760' => 'cansat', 'CANSAT56G3971' => 'cansat', 'CANSAT56G4116' => 'cansat', 'CANSAT80G1259' => 'cansat', 'CARHR027730' => 'chi', 'CARHR033880' => 'chi', 'CARHR043270' => 'chi', 'CARHR145330' => 'chi', 'CARHR145340' => 'chi', 'CARHR175570' => 'chi', 'CARHR181570' => 'chi', 'CARHR258470' => 'chi', 'CARHR260490' => 'chi', 'CARHR294220' => 'chi', 'Carub.0001s2668' => 'cru', 'Carub.0001s3257' => 'cru', 'Carub.0001s4220' => 'cru', 'Carub.0005s0179' => 'cru', 'Carub.0006s2807' => 'cru', 'Carub.0007s0039' => 'cru', 'Carub.0008s0169' => 'cru', 'Carub.0008s0636' => 'cru', 'Ca_00338_v3' => 'car', 'Ca_00542_v3' => 'car', 'Ca_01844_v3' => 'car', 'Ca_10611_v3' => 'car', 'Ca_13326_v3' => 'car', 'Ca_17944_v3' => 'car', 'Ca_18546_v3' => 'car', 'Ca_24219_v3' => 'car', 'Ca_29972_v3' => 'car', 'CBR_g3681' => 'cbr', 'CBR_g40021' => 'cbr', 'Cc01_g08140' => 'ccan', 'Cc02_g13410' => 'ccan', 'Cc02_g37480' => 'ccan', 'Cc05_g12030' => 'ccan', 'Cc09_g03370' => 'ccan', 'Cc09_g10300' => 'ccan', 'Cc10_g03530' => 'ccan', 'Cc10_g11380' => 'ccan', 'CDE01G0176' => 'cde', 'CDE02G0675' => 'cde', 'CDE02G0942' => 'cde', 'CDE02G1153' => 'cde', 'CDE02G4177' => 'cde', 'CDE04G2117' => 'cde', 'CDE04G2736' => 'cde', 'CDE08G1161' => 'cde', 'CDE09G1238' => 'cde', 'Cfa000467' => 'cfa', 'Cfa000947' => 'cfa', 'Cfa004969' => 'cfa', 'Cfa005284' => 'cfa', 'Cfa008993' => 'cfa', 'Cfa018187' => 'cfa', 'Cfa018454' => 'cfa', 'Cfa020585' => 'cfa', 'Ciclev10000424m.g' => 'ccl', 'Ciclev10003605m.g' => 'ccl', 'Ciclev10007828m.g' => 'ccl', 'Ciclev10014620m.g' => 'ccl', 'Ciclev10015169m.g' => 'ccl', 'Ciclev10018291m.g' => 'ccl', 'Ciclev10028256m.g' => 'ccl', 'Ciclev10033822m.g' => 'ccl', 'CiPaw.05G060300' => 'cil', 'CiPaw.05G085000' => 'cil', 'CiPaw.06G083700' => 'cil', 'CiPaw.06G120300' => 'cil', 'CiPaw.09G060500' => 'cil', 'CiPaw.09G123800' => 'cil', 'CiPaw.11G169700' => 'cil', 'CiPaw.12G118300' => 'cil', 'CiPaw.15G071000' => 'cil', 'CiPaw.15G081900' => 'cil', 'ClCG01G024610' => 'cla', 'ClCG03G006070' => 'cla', 'ClCG05G019250' => 'cla', 'ClCG09G009500' => 'cla', 'ClCG11G008200' => 'cla', 'ClCG11G018080' => 'cla', 'COL.COLO4_17373' => 'col', 'COL.COLO4_22994' => 'col', 'COL.COLO4_26389' => 'col', 'COL.COLO4_27170' => 'col', 'COL.COLO4_31074' => 'col', 'COL.COLO4_31465' => 'col', 'COL.COLO4_36438' => 'col', 'COL.COLO4_36439' => 'col', 'Cpa.g.c38781' => 'cpa', 'Cpa.g.sc128.12' => 'cpa', 'Cpa.g.sc166.7' => 'cpa', 'Cpa.g.sc166.8' => 'cpa', 'Cpa.g.sc20.111' => 'cpa', 'Cpa.g.sc27.31' => 'cpa', 'Cpa.g.sc64.36' => 'cpa', 'Cpa.g.sc64.37' => 'cpa', 'Cpa.g.sc66.49' => 'cpa', 'Cpa.g.sc80.64' => 'cpa', 'CsaV3_1G012320' => 'csa', 'CsaV3_2G008480' => 'csa', 'CsaV3_2G033450' => 'csa', 'CsaV3_3G044830' => 'csa', 'CsaV3_4G033710' => 'csa', 'CsaV3_6G051730' => 'csa', 'CsaV3_7G025350' => 'csa', 'CSS0001067' => 'camsi', 'CSS0005996' => 'camsi', 'CSS0006590' => 'camsi', 'CSS0009673' => 'camsi', 'CSS0010201' => 'camsi', 'CSS0010549' => 'camsi', 'CSS0011364' => 'camsi', 'CSS0014473' => 'camsi', 'CSS0014961' => 'camsi', 'CSS0020191' => 'camsi', 'CSS0021165' => 'camsi', 'CSS0022306' => 'camsi', 'CSS0030591' => 'camsi', 'CSS0030696' => 'camsi', 'CSS0032653' => 'camsi', 'CSS0037487' => 'camsi', 'CSS0041102' => 'camsi', 'CSS0041261' => 'camsi', 'CSS0046246' => 'camsi', 'CSS0049256' => 'camsi', 'DCAR_004075' => 'dca', 'DCAR_011538' => 'dca', 'DCAR_019553' => 'dca', 'DCAR_020952' => 'dca', 'DCAR_021739' => 'dca', 'DCAR_027407' => 'dca', 'DCAR_027913' => 'dca', 'DCAR_028066' => 'dca', 'Dinv05899' => 'din', 'Dinv07563' => 'din', 'Dinv08010' => 'din', 'Dinv14125' => 'din', 'Dinv20172' => 'din', 'Dinv30743' => 'din', 'Dinv31229' => 'din', 'Dinv34162' => 'din', 'Dinv36028' => 'din', 'Dinv39368' => 'din', 'Dinv40565' => 'din', 'Dinv41706' => 'din', 'Duzib052G0089' => 'dzi', 'Duzib116G0641' => 'dzi', 'Duzib132G0069' => 'dzi', 'Duzib132G1219' => 'dzi', 'Duzib147G0278' => 'dzi', 'Duzib160G0480' => 'dzi', 'Duzib170G0661' => 'dzi', 'Duzib177G0591' => 'dzi', 'Duzib187G1353' => 'dzi', 'Duzib192G0858' => 'dzi', 'Duzib192G0883' => 'dzi', 'Duzib213G0506' => 'dzi', 'Duzib235G0289' => 'dzi', 'Duzib251G0422' => 'dzi', 'ECA232G3898' => 'eca', 'ECA233G5950' => 'eca', 'ECA234G1699' => 'eca', 'ECA234G2421' => 'eca', 'ECA236G0426' => 'eca', 'ECA236G4331' => 'eca', 'ECA248G2573' => 'eca', 'EL10Ac1g00077' => 'bvu', 'EL10Ac1g01746' => 'bvu', 'EL10Ac2g03464' => 'bvu', 'EL10Ac4g08176' => 'bvu', 'EL10Ac7g17521' => 'bvu', 'EL10Ac8g20386' => 'bvu', 'EL10Ac9g21343' => 'bvu', 'EL10Ac9g22688' => 'bvu', 'Eucgr.B03434' => 'egr', 'Eucgr.D00618' => 'egr', 'Eucgr.E02395' => 'egr', 'Eucgr.F01129' => 'egr', 'Eucgr.F02622' => 'egr', 'Eucgr.F04207' => 'egr', 'FAN01G0570' => 'fan', 'FAN03G3351' => 'fan', 'FAN06G3702' => 'fan', 'FAN07G2149' => 'fan', 'FAN10G3758' => 'fan', 'FAN11G1170' => 'fan', 'FAN11G2050' => 'fan', 'FAN11G2724' => 'fan', 'FAN12G1700' => 'fan', 'FAN12G2028' => 'fan', 'FAN15G1160' => 'fan', 'FAN15G3063' => 'fan', 'FAN16G2540' => 'fan', 'FAN16G3077' => 'fan', 'FAN16G3624' => 'fan', 'FAN17G0221' => 'fan', 'FAN20G2492' => 'fan', 'FAN20G2905' => 'fan', 'FAN21G0548' => 'fan', 'FAN21G1300' => 'fan', 'FAN22G0077' => 'fan', 'FAN22G1315' => 'fan', 'FAN24G1280' => 'fan', 'FAN24G1445' => 'fan', 'FAN24G3527' => 'fan', 'FAN25G0464' => 'fan', 'FAN25G2885' => 'fan', 'FAN25G3270' => 'fan', 'FAN27G1101' => 'fan', 'FAN27G2846' => 'fan', 'FAN27G3524' => 'fan', 'FvH4_2g11770' => 'fve', 'FvH4_2g15630' => 'fve', 'FvH4_3g05570' => 'fve', 'FvH4_3g09110' => 'fve', 'FvH4_3g19940' => 'fve', 'FvH4_4g04821' => 'fve', 'FvH4_4g31480' => 'fve', 'FvH4_7g01740' => 'fve', 'Glyma.05G130400' => 'gma', 'Glyma.05G156400' => 'gma', 'Glyma.07G197000' => 'gma', 'Glyma.08G085151' => 'gma', 'Glyma.08G114500' => 'gma', 'Glyma.08G300400' => 'gma', 'Glyma.10G215800' => 'gma', 'Glyma.12G224400' => 'gma', 'Glyma.13G179300' => 'gma', 'Glyma.13G218151' => 'gma', 'Glyma.13G238800' => 'gma', 'Glyma.13G276900' => 'gma', 'Glyma.14G078200' => 'gma', 'Glyma.15G074500' => 'gma', 'Glyma.15G094100' => 'gma', 'Glyma.17G247200' => 'gma', 'Glyma.18G120100' => 'gma', 'Glyma.20G176000' => 'gma', 'Gohir.A01G063600' => 'ghi', 'Gohir.A01G170301' => 'ghi', 'Gohir.A02G060500' => 'ghi', 'Gohir.A05G133850' => 'ghi', 'Gohir.A05G161400' => 'ghi', 'Gohir.A06G012900' => 'ghi', 'Gohir.A06G035901' => 'ghi', 'Gohir.A06G127100' => 'ghi', 'Gohir.A06G210500' => 'ghi', 'Gohir.A08G008650' => 'ghi', 'Gohir.A09G072700' => 'ghi', 'Gohir.A09G088301' => 'ghi', 'Gohir.A10G040600' => 'ghi', 'Gohir.A12G036300' => 'ghi', 'Gohir.A12G143350' => 'ghi', 'Gohir.A12G165500' => 'ghi', 'Gohir.A13G145700' => 'ghi', 'Gohir.D01G050000' => 'ghi', 'Gohir.D01G051366' => 'ghi', 'Gohir.D01G161350' => 'ghi', 'Gohir.D02G065900' => 'ghi', 'Gohir.D05G164200' => 'ghi', 'Gohir.D05G355500' => 'ghi', 'Gohir.D06G010400' => 'ghi', 'Gohir.D06G111250' => 'ghi', 'Gohir.D06G132000' => 'ghi', 'Gohir.D06G210500' => 'ghi', 'Gohir.D07G165675' => 'ghi', 'Gohir.D08G062240' => 'ghi', 'Gohir.D08G086101' => 'ghi', 'Gohir.D08G138060' => 'ghi', 'Gohir.D09G072300' => 'ghi', 'Gohir.D10G041400' => 'ghi', 'Gohir.D11G191020' => 'ghi', 'Gohir.D11G212066' => 'ghi', 'Gohir.D12G036300' => 'ghi', 'Gohir.D12G168600' => 'ghi', 'Gohir.D13G150600' => 'ghi', 'Gorai.001G057300' => 'gra', 'Gorai.002G069900' => 'gra', 'Gorai.002G200000' => 'gra', 'Gorai.003G067600' => 'gra', 'Gorai.005G074800' => 'gra', 'Gorai.006G087300' => 'gra', 'Gorai.008G037500' => 'gra', 'Gorai.008G181400' => 'gra', 'Gorai.009G169400' => 'gra', 'Gorai.009G387900' => 'gra', 'Gorai.010G013300' => 'gra', 'Gorai.010G153800' => 'gra', 'Gorai.010G255800' => 'gra', 'Gorai.011G043700' => 'gra', 'Gorai.011G198900' => 'gra', 'Gorai.013G168400' => 'gra', 'GSVIVG01005212001' => 'vvi', 'GSVIVG01006163001' => 'vvi', 'GSVIVG01009625001' => 'vvi', 'GSVIVG01014338001' => 'vvi', 'GSVIVG01020005001' => 'vvi', 'GSVIVG01021450001' => 'vvi', 'GSVIVG01023975001' => 'vvi', 'GSVIVG01034490001' => 'vvi', 'HanXRQChr04g0112071' => 'han', 'HanXRQChr05g0131151' => 'han', 'HanXRQChr09g0262371' => 'han', 'HanXRQChr09g0268401' => 'han', 'HanXRQChr10g0279241' => 'han', 'HanXRQChr10g0297961' => 'han', 'HanXRQChr11g0326231' => 'han', 'HanXRQChr11g0328471' => 'han', 'HanXRQChr16g0507941' => 'han', 'HanXRQChr17g0560211' => 'han', 'Haze_02108' => 'cav', 'Haze_02428' => 'cav', 'Haze_05593' => 'cav', 'Haze_06448' => 'cav', 'Haze_09427' => 'cav', 'Haze_12022' => 'cav', 'Haze_17612' => 'cav', 'Haze_17928' => 'cav', 'Hma1.2p1_0032F.1_g019250' => 'hma', 'Hma1.2p1_0163F.1_g072690' => 'hma', 'Hma1.2p1_0265F.1_g106710' => 'hma', 'Hma1.2p1_0286F.1_g113970' => 'hma', 'Hma1.2p1_0363F.1_g136640' => 'hma', 'Hma1.2p1_0584F.1_g183470' => 'hma', 'Hma1.2p1_0885F.1_g232570' => 'hma', 'HPP92_006022' => 'vpl', 'HPP92_007320' => 'vpl', 'HPP92_011521' => 'vpl', 'HPP92_019387' => 'vpl', 'HPP92_024038' => 'vpl', 'Hund05891' => 'sun', 'Hund06450' => 'sun', 'Hund12053' => 'sun', 'Hund16800' => 'sun', 'Hund21222' => 'sun', 'Hund22896' => 'sun', 'Hund23746' => 'sun', 'Hund27083' => 'sun', 'Lalb_Chr02g0141831' => 'lal', 'Lalb_Chr02g0141841' => 'lal', 'Lalb_Chr05g0220411' => 'lal', 'Lalb_Chr06g0162081' => 'lal', 'Lalb_Chr09g0327651' => 'lal', 'Lalb_Chr13g0295051' => 'lal', 'Lalb_Chr15g0086801' => 'lal', 'Lalb_Chr16g0383781' => 'lal', 'Lalb_Chr16g0383791' => 'lal', 'Lalb_Chr18g0055441' => 'lal', 'Lalb_Chr18g0059611' => 'lal', 'Lalb_Chr20g0109661' => 'lal', 'Lalb_Chr20g0109831' => 'lal', 'Lalb_Chr20g0121871' => 'lal', 'Lalb_Chr22g0355361' => 'lal', 'Lalb_Chr25g0286371' => 'lal', 'Lj1A1187G43' => 'lonja', 'Lj1A1205T50' => 'lonja', 'Lj1A800G33' => 'lonja', 'Lj1C1187T7' => 'lonja', 'Lj1C843T11' => 'lonja', 'Lj1g0010940' => 'lja', 'Lj2A288T69' => 'lonja', 'Lj3g0024276' => 'lja', 'Lj4A47T76' => 'lonja', 'Lj4g0005805' => 'lja', 'Lj4g0006097' => 'lja', 'Lj4g0008528' => 'lja', 'Lj4g0024907' => 'lja', 'Lj5g0012472' => 'lja', 'Lj5g0018648' => 'lja', 'Lj6C789G1' => 'lonja', 'Lj6g0004000' => 'lja', 'Lj7A292G67' => 'lonja', 'Lj7A292T64' => 'lonja', 'Lj9A400T58' => 'lonja', 'Lsat_1_v5_gn_1_126181' => 'lsa', 'Lsat_1_v5_gn_4_123041' => 'lsa', 'Lsat_1_v5_gn_4_133620' => 'lsa', 'Lsat_1_v5_gn_4_53221' => 'lsa', 'Lsat_1_v5_gn_4_71961' => 'lsa', 'Lsat_1_v5_gn_7_105241' => 'lsa', 'Lsat_1_v5_gn_7_21361' => 'lsa', 'Lsat_1_v5_gn_7_28860' => 'lsa', 'Lsat_1_v5_gn_7_31260' => 'lsa', 'Lsat_1_v5_gn_8_52801' => 'lsa', 'Manes.02G191400' => 'mes', 'Manes.03G110100' => 'mes', 'Manes.04G071100' => 'mes', 'Manes.05G100500' => 'mes', 'Manes.05G164700' => 'mes', 'Manes.15G087000' => 'mes', 'Manes.15G121500' => 'mes', 'Manes.16G028300' => 'mes', 'Manes.17G046100' => 'mes', 'Manes.17G069800' => 'mes', 'Manes.18G100500' => 'mes', 'Mapoly0002s0109' => 'mpo', 'Mapoly0024s0007' => 'mpo', 'Mapoly0089s0032' => 'mpo', 'MBI04_g42241_MAGBIO' => 'mbi', 'MBI05_g11988_MAGBIO' => 'mbi', 'MBI05_g35452_MAGBIO' => 'mbi', 'MBI07_g30179_MAGBIO' => 'mbi', 'MBI07_g35859_MAGBIO' => 'mbi', 'MBI07_g35860_MAGBIO' => 'mbi', 'MBI07_g37166_MAGBIO' => 'mbi', 'MBI08_g18172_MAGBIO' => 'mbi', 'MBI09_g08441_MAGBIO' => 'mbi', 'MBI13_g01676_MAGBIO' => 'mbi', 'MBI14_g42955_MAGBIO' => 'mbi', 'MBI16_g13161_MAGBIO' => 'mbi', 'MBI17_g27204_MAGBIO' => 'mbi', 'MBI19_g21595_MAGBIO' => 'mbi', 'MD00G1148400' => 'mdo', 'MD02G1301200' => 'mdo', 'MD03G1227800' => 'mdo', 'MD05G1041100' => 'mdo', 'MD05G1124800' => 'mdo', 'MD05G1284000' => 'mdo', 'MD05G1338800' => 'mdo', 'MD05G1338900' => 'mdo', 'MD07G1022800' => 'mdo', 'MD10G1047500' => 'mdo', 'MD10G1127500' => 'mdo', 'MD10G1262300' => 'mdo', 'MD10G1293800' => 'mdo', 'MD16G1074300' => 'mdo', 'Medtr1g021670' => 'mtr', 'Medtr1g096320' => 'mtr', 'Medtr2g013690' => 'mtr', 'Medtr2g019450' => 'mtr', 'Medtr2g085170' => 'mtr', 'Medtr4g088785' => 'mtr', 'Medtr8g055930' => 'mtr', 'Medtr8g085850' => 'mtr', 'MELO3C002605.2' => 'cme', 'MELO3C003891.2' => 'cme', 'MELO3C004012.2' => 'cme', 'MELO3C007134.2' => 'cme', 'MELO3C008118.2' => 'cme', 'MELO3C016700.2' => 'cme', 'MELO3C024127.2' => 'cme', 'MELO3C033361.2' => 'cme', 'MELO3C033362.2' => 'cme', 'Migut.C00430' => 'egut', 'Migut.C01246' => 'egut', 'Migut.E00101' => 'egut', 'Migut.H01486' => 'egut', 'Migut.H01939' => 'egut', 'Migut.K00360' => 'egut', 'Migut.M00910' => 'egut', 'Migut.M01139' => 'egut', 'Migut.N02677' => 'egut', 'MSTRG.13252' => 'ama', 'MSTRG.14701' => 'ama', 'MSTRG.1521' => 'ama', 'MSTRG.15884' => 'ama', 'MSTRG.16242' => 'ama', 'MSTRG.22285' => 'ama', 'MSTRG.22444' => 'ama', 'MSTRG.2349' => 'ama', 'MSTRG.26308' => 'ama', 'MSTRG.28296' => 'ama', 'MSTRG.9895' => 'ama', 'Nitab4.5_0000110g0060' => 'nta', 'Nitab4.5_0000420g0130' => 'nta', 'Nitab4.5_0000422g0030' => 'nta', 'Nitab4.5_0000560g0180' => 'nta', 'Nitab4.5_0000703g0100' => 'nta', 'Nitab4.5_0000786g0200' => 'nta', 'Nitab4.5_0001336g0020' => 'nta', 'Nitab4.5_0001796g0030' => 'nta', 'Nitab4.5_0003348g0060' => 'nta', 'Nitab4.5_0003698g0040' => 'nta', 'Nitab4.5_0003942g0090' => 'nta', 'Nitab4.5_0004775g0070' => 'nta', 'Nitab4.5_0004864g0030' => 'nta', 'Nitab4.5_0005615g0020' => 'nta', 'Nitab4.5_0009288g0030' => 'nta', 'Nitab4.5_0009341g0010' => 'nta', 'Nitab4.5_0009535g0010' => 'nta', 'Nn1g03995' => 'nnu', 'Nn1g04100' => 'nnu', 'Nn1g06530' => 'nnu', 'Nn3g16404' => 'nnu', 'Nn3g17212' => 'nnu', 'Nn3g20776' => 'nnu', 'Nn3g21923' => 'nnu', 'Nn5g27737' => 'nnu', 'Nn5g29461' => 'nnu', 'Nn7g38355' => 'nnu', 'Nn8g39873' => 'nnu', 'Oeu000548.2' => 'oeu', 'Oeu004672.1' => 'oeu', 'Oeu015605.2' => 'oeu', 'Oeu016092.1' => 'oeu', 'Oeu017879.3' => 'oeu', 'Oeu024910.1' => 'oeu', 'Oeu028965.1' => 'oeu', 'Oeu031269.1' => 'oeu', 'Oeu031270.1' => 'oeu', 'Oeu032535.1' => 'oeu', 'Oeu034151.1' => 'oeu', 'Oeu034152.1' => 'oeu', 'Oeu034588.2' => 'oeu', 'Oeu050846.1' => 'oeu', 'Oeu050849.2' => 'oeu', 'Oeu051063.2' => 'oeu', 'Oeu052368.1' => 'oeu', 'Oeu052370.1' => 'oeu', 'Os01g0210400' => 'osa', 'Os01g0304300' => 'osa', 'Os01g0749100' => 'osa', 'Os02g0745800' => 'osa', 'Os03g0769050' => 'osa', 'Os05g0531500' => 'osa', 'Os06g0724300' => 'osa', 'Os11g0198100' => 'osa', 'Peaxi162Scf00069g01425' => 'pax', 'Peaxi162Scf00280g00811' => 'pax', 'Peaxi162Scf00310g00615' => 'pax', 'Peaxi162Scf00362g00542' => 'pax', 'Peaxi162Scf00461g00310' => 'pax', 'Peaxi162Scf00530g00118' => 'pax', 'Peaxi162Scf00541g00057' => 'pax', 'Peaxi162Scf00661g00017' => 'pax', 'Peaxi162Scf00926g00027' => 'pax', 'Peaxi162Scf01064g00263' => 'pax', 'Peaxi162Scf01211g00135' => 'pax', 'PGR004G2336' => 'pgr', 'PGR042G0327' => 'pgr', 'PGR042G1957' => 'pgr', 'PGR042G2003' => 'pgr', 'PGR042G3929' => 'pgr', 'PGR083G1137' => 'pgr', 'PGR083G1364' => 'pgr', 'PGSC0003DMG400003381' => 'stu', 'PGSC0003DMG400003417' => 'stu', 'PGSC0003DMG400008981' => 'stu', 'PGSC0003DMG400012417' => 'stu', 'PGSC0003DMG400012823' => 'stu', 'PGSC0003DMG400016885' => 'stu', 'PGSC0003DMG400022812' => 'stu', 'PGSC0003DMG400029726' => 'stu', 'PGSC0003DMG401009243' => 'stu', 'PGSC0003DMG401031505' => 'stu', 'PGSC0003DMG402031505' => 'stu', 'Phvul.001G017600' => 'pvu', 'Phvul.002G193500' => 'pvu', 'Phvul.002G228900' => 'pvu', 'Phvul.002G236800' => 'pvu', 'Phvul.003G049500' => 'pvu', 'Phvul.005G072000' => 'pvu', 'Phvul.006G164800' => 'pvu', 'Phvul.006G185100' => 'pvu', 'Phvul.007G090000' => 'pvu', 'Potri.001G399800' => 'ptr', 'Potri.002G149900' => 'ptr', 'Potri.004G044100' => 'ptr', 'Potri.004G177600' => 'ptr', 'Potri.009G138000' => 'ptr', 'Potri.010G094000' => 'ptr', 'Potri.011G053000' => 'ptr', 'Potri.011G119300' => 'ptr', 'Potri.013G113700' => 'ptr', 'Potri.018G107800' => 'ptr', 'Potri.019G084100' => 'ptr', 'Pp3c14_23720' => 'ppa', 'Pp3c16_6340' => 'ppa', 'Pp3c23_13420' => 'ppa', 'Pp3c24_2740' => 'ppa', 'Pp3c25_860' => 'ppa', 'Pp3c8_21750' => 'ppa', 'Prupe.1G273000' => 'ppe', 'Prupe.1G273700' => 'ppe', 'Prupe.1G274100' => 'ppe', 'Prupe.2G023300' => 'ppe', 'Prupe.4G048000' => 'ppe', 'Prupe.4G080400' => 'ppe', 'Prupe.4G181200' => 'ppe', 'Prupe.8G056900' => 'ppe', 'Prupe.8G168700' => 'ppe', 'Psat1g189080' => 'psa', 'Psat1g204760' => 'psa', 'Psat4g175560' => 'psa', 'Psat4g177720' => 'psa', 'Psat5g244240' => 'psa', 'Psat6g010720' => 'psa', 'Psat6g187200' => 'psa', 'Psat7g072040' => 'psa', 'PSO017G3501' => 'pso', 'PSO063G2148' => 'pso', 'PSO063G5608' => 'pso', 'PSO210G6392' => 'pso', 'PSO541G2319' => 'pso', 'PSO541G2836' => 'pso', 'PSO541G4012' => 'pso', 'PSO541G6253' => 'pso', 'PSO675G0580' => 'pso', 'PSO675G0856' => 'pso', 'PSO675G5635' => 'pso', 'PSO675G9157' => 'pso', 'PSO832G1660' => 'pso', 'PSO832G1969' => 'pso', 'QL02p007186' => 'qlo', 'QL02p033904' => 'qlo', 'QL03p064391' => 'qlo', 'QL05p040593' => 'qlo', 'QL05p058242' => 'qlo', 'QL08p021825' => 'qlo', 'QL11p004981' => 'qlo', 'RcHm_v2.0_Chr1g0318301' => 'rch', 'RcHm_v2.0_Chr4g0418501' => 'rch', 'RcHm_v2.0_Chr4g0439971' => 'rch', 'RcHm_v2.0_Chr5g0008541' => 'rch', 'RcHm_v2.0_Chr5g0014101' => 'rch', 'RcHm_v2.0_Chr5g0014131' => 'rch', 'RcHm_v2.0_Chr5g0033621' => 'rch', 'RcHm_v2.0_Chr6g0272041' => 'rch', 'RcHm_v2.0_Chr6g0278831' => 'rch', 'Rhsim02G0130400' => 'rsi', 'Rhsim02G0171100' => 'rsi', 'Rhsim05G0053000' => 'rsi', 'Rhsim05G0053100' => 'rsi', 'Rhsim06G0096500' => 'rsi', 'Rhsim06G0096600' => 'rsi', 'Rhsim06G0199100' => 'rsi', 'Rhsim12G0062300' => 'rsi', 'Rhsim12G0062800' => 'rsi', 'Sabra02G0118600' => 'sbr', 'Sabra04G0027300' => 'sbr', 'Sabra04G0119500' => 'sbr', 'Sabra08G0112500' => 'sbr', 'Sabra11G0036800' => 'sbr', 'Sabra11G0103800' => 'sbr', 'Sabra13G0096300' => 'sbr', 'Sabra16G0262300' => 'sbr', 'Sabra18G0091700' => 'sbr', 'Sabra19G0095400' => 'sbr', 'SalBow6G3080' => 'sbo', 'SalBow7G1157' => 'sbo', 'SalBow7G2123' => 'sbo', 'SalBow7G2285' => 'sbo', 'SalBow7G3537' => 'sbo', 'SalBow8G2947' => 'sbo', 'SalBow8G4463' => 'sbo', 'SalBow8G5466' => 'sbo', 'Sc01g0001750' => 'sci', 'Sc02g0006640' => 'sci', 'Sc02g0006670' => 'sci', 'Sc04g0008220' => 'sci', 'Sc05g0006190' => 'sci', 'Sc08g0002760' => 'sci', 'Sc17g0006170' => 'sci', 'Sc22g0002050' => 'sci', 'Sc23g0001190' => 'sci', 'Sc24g0000980' => 'sci', 'Sed0006245' => 'sed', 'Sed0007543' => 'sed', 'Sed0009411' => 'sed', 'Sed0010765' => 'sed', 'Sed0012944' => 'sed', 'Sed0014682' => 'sed', 'Sed0016174' => 'sed', 'Sed0016796' => 'sed', 'Sed0020317' => 'sed', 'Sed0021467' => 'sed', 'SEGI_01316' => 'sgi', 'SEGI_03374' => 'sgi', 'SEGI_16265' => 'sgi', 'SEGI_18569' => 'sgi', 'SEGI_20351' => 'sgi', 'SEGI_26395' => 'sgi', 'SEGI_29469' => 'sgi', 'SEGI_34771' => 'sgi', 'SEGI_36769' => 'sgi', 'SEGI_37139' => 'sgi', 'SGA_v2.0_scaffold100G29687' => 'sas', 'SGA_v2.0_scaffold118G32472' => 'sas', 'SGA_v2.0_scaffold14G07051' => 'sas', 'SGA_v2.0_scaffold183G39845' => 'sas', 'SGA_v2.0_scaffold1G00174' => 'sas', 'SGA_v2.0_scaffold22G09714' => 'sas', 'SGA_v2.0_scaffold333G48992' => 'sas', 'SGA_v2.0_scaffold46G17491' => 'sas', 'SGA_v2.0_scaffold49G18294' => 'sas', 'SGA_v2.0_scaffold63G21658' => 'sas', 'SHI01741' => 'shi', 'SHI05771' => 'shi', 'SHI18077' => 'shi', 'SHI20525' => 'shi', 'SHI20527' => 'shi', 'SHI20528' => 'shi', 'SMO172G0185' => 'smo', 'SMO198G0020' => 'smo', 'SMO351G0006' => 'smo', 'SMO356G0118' => 'smo', 'SMO358G0296' => 'smo', 'SMO367G0079' => 'smo', 'SMO367G1277' => 'smo', 'Solyc01g014220.3' => 'sly', 'Solyc01g111770.2' => 'sly', 'Solyc02g078180.3' => 'sly', 'Solyc03g006430.3' => 'sly', 'Solyc03g006456.1' => 'sly', 'Solyc03g079860.2' => 'sly', 'Solyc04g079770.3' => 'sly', 'Solyc05g007430.4' => 'sly', 'Solyc07g063150.3' => 'sly', 'Solyc08g016620.3' => 'sly', 'Solyc09g057590.3' => 'sly', 'Solyc09g057600.1' => 'sly', 'Solyc10g009050.3' => 'sly', 'Solyc11g017420.2' => 'sly', 'Sopen01g053810' => 'spe', 'Sopen02g023040' => 'spe', 'Sopen03g002440' => 'spe', 'Sopen04g033350' => 'spe', 'Sopen05g003310' => 'spe', 'Sopen07g004050' => 'spe', 'Sopen07g031340' => 'spe', 'Sopen08g006990' => 'spe', 'Sopen10g004830' => 'spe', 'Sopen11g009370' => 'spe', 'Sp1g24450' => 'spa', 'Sp1g29670' => 'spa', 'Sp1g39600' => 'spa', 'Sp2g11080' => 'spa', 'Sp2g13970' => 'spa', 'Sp4g16130' => 'spa', 'Sp6g13080' => 'spa', 'Sp7g37270' => 'spa', 'TAR371G0065' => 'tar', 'TAR376G0340' => 'tar', 'TAR376G0435' => 'tar', 'TAR381G0002' => 'tar', 'TAR381G1236' => 'tar', 'TAR624G0055' => 'tar', 'TAR624G0324' => 'tar', 'TAR624G0696' => 'tar', 'TAR624G0906' => 'tar', 'TAR625G0107' => 'tar', 'TAR626G0015' => 'tar', 'TAR626G1356' => 'tar', 'TAR627G0888' => 'tar', 'TAR628G0399' => 'tar', 'TAR628G1327' => 'tar', 'TAR629G2831' => 'tar', 'TAR629G2874' => 'tar', 'TAR633G1432' => 'tar', 'TAR633G2771' => 'tar', 'THA.LOC104803394' => 'tha', 'THA.LOC104805153' => 'tha', 'THA.LOC104806784' => 'tha', 'THA.LOC104810473' => 'tha', 'THA.LOC104813100' => 'tha', 'THA.LOC104814215' => 'tha', 'THA.LOC104815554' => 'tha', 'THA.LOC104820544' => 'tha', 'THA.LOC104824754' => 'tha', 'THA.LOC104827717' => 'tha', 'Thecc.02G031400' => 'tca', 'Thecc.02G055900' => 'tca', 'Thecc.02G350800' => 'tca', 'Thecc.06G150900' => 'tca', 'Thecc.06G186600' => 'tca', 'Thecc.07G089600' => 'tca', 'Thecc.08G020400' => 'tca', 'Thecc.08G182100' => 'tca', 'Thhalv10000873m.g' => 'esa', 'Thhalv10004185m.g' => 'esa', 'Thhalv10006981m.g' => 'esa', 'Thhalv10007204m.g' => 'esa', 'Thhalv10011374m.g' => 'esa', 'Thhalv10013482m.g' => 'esa', 'Thhalv10017801m.g' => 'esa', 'Thhalv10024983m.g' => 'esa', 'TPR.G12072' => 'tpr', 'TPR.G15769' => 'tpr', 'TPR.G16504' => 'tpr', 'TPR.G16506' => 'tpr', 'TPR.G24345' => 'tpr', 'TPR.G26666' => 'tpr', 'TPR.G27320' => 'tpr', 'TPR.G31819' => 'tpr', 'TPR.G38879' => 'tpr', 'TPR.G39015' => 'tpr', 'TPR.G8819' => 'tpr', 'TWI09G0924' => 'twi', 'TWI12G0811' => 'twi', 'TWI12G1294' => 'twi', 'TWI31G0150' => 'twi', 'TWI36G1262' => 'twi', 'TWI38G1287' => 'twi', 'TWI38G1633' => 'twi', 'TWI38G1982' => 'twi', 'TWI39G0116' => 'twi', 'TWI60G1011' => 'twi', 'TWI63G0171' => 'twi', 'TWI73G0839' => 'twi', 'TWI79G1511' => 'twi', 'unitig_0.g915' => 'ugi', 'unitig_0.g916' => 'ugi', 'unitig_21.g20219' => 'ugi', 'unitig_21.g20416' => 'ugi', 'unitig_578.g16132' => 'ugi', 'unitig_578.g16718' => 'ugi', 'unitig_62.g23481' => 'ugi', 'unitig_744.g24535' => 'ugi', 'unitig_749.g13525' => 'ugi', 'vmacro01248' => 'vma', 'vmacro02290' => 'vma', 'vmacro10946' => 'vma', 'vmacro11865' => 'vma', 'vmacro12493' => 'vma', 'vmacro17322' => 'vma', 'vmacro21599' => 'vma', 'vmacro23041' => 'vma', 'VMungo0251G0004' => 'vmu', 'VMungo0251G2639' => 'vmu', 'VMungo0251G2967' => 'vmu', 'VMungo0540G0864' => 'vmu', 'VMungo0540G1569' => 'vmu', 'VMungo0647G0317' => 'vmu', 'VMungo0720G1373' => 'vmu', 'VMungo0720G1508' => 'vmu', 'VMungo1080G0485' => 'vmu', 'VMungo1215G3177' => 'vmu', 'Zm00001eb112600' => 'zma', 'Zm00001eb120220' => 'zma', 'Zm00001eb153240' => 'zma', 'Zm00001eb168880' => 'zma', 'Zm00001eb213920' => 'zma', 'Zm00001eb228280' => 'zma', 'Zm00001eb254580' => 'zma', 'Zm00001eb272180' => 'zma', 'Zm00001eb293190' => 'zma', 'Zm00001eb322930' => 'zma', 'Zm00001eb353360' => 'zma', 'Zm00001eb353390' => 'zma', 'Zm00001eb353430' => 'zma', 'Zm00001eb353440' => 'zma', 'Zm00001eb353780' => 'zma' ) $gf_id = 'HOM05D000499' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000499' ) $data_identifier = 'HOM05D000499' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 29, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 12, 'amhyb' => (int) 8, 'aly' => (int) 12, 'aox' => (int) 9, 'arhy' => (int) 26, 'ath' => (int) 8, 'atr' => (int) 7, 'acertr' => (int) 10, 'cqu' => (int) 15, 'bca' => (int) 29, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 11, 'cansat' => (int) 8, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 9, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 8, 'cpa' => (int) 10, 'csa' => (int) 7, 'camsi' => (int) 20, 'dca' => (int) 8, 'din' => (int) 12, 'dzi' => (int) 14, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 6, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 38, 'gra' => (int) 16, 'vvi' => (int) 8, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 5, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 11, 'lja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 11, 'mpo' => (int) 3, 'mbi' => (int) 14, 'mdo' => (int) 14, 'mtr' => (int) 8, 'cme' => (int) 9, 'egut' => (int) 9, 'ama' => (int) 11, 'nta' => (int) 17, 'nnu' => (int) 11, 'oeu' => (int) 18, 'osa' => (int) 8, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 6, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 9, 'rsi' => (int) 9, 'sbr' => (int) 10, 'sbo' => (int) 8, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 10, 'sas' => (int) 10, 'shi' => (int) 6, 'smo' => (int) 7, 'sly' => (int) 14, 'spe' => (int) 10, 'spa' => (int) 8, 'tar' => (int) 19, 'tha' => (int) 10, 'tca' => (int) 8, 'esa' => (int) 8, 'tpr' => (int) 11, 'twi' => (int) 13, 'ugi' => (int) 9, 'vma' => (int) 8, 'vmu' => (int) 10, 'zma' => (int) 15 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb353780' $species_info = array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ) $local_species = 'pax' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000499', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1066', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p29780' => 'bna', 'A02p33180' => 'bna', 'A03p16470' => 'bna', 'A03p66010' => 'bna', 'A04p25970' => 'bna', 'A06p01270' => 'bna', 'A06p46080' => 'bna', 'A07p11400' => 'bna', 'A08p01840' => 'bna', 'A08p08230' => 'bna', 'A08p25740' => 'bna', 'A09p32070' => 'bna', 'A09p37830' => 'bna', 'A09p42840' => 'bna', 'A09p42850' => 'bna', 'Aa31LG10G2060' => 'aar', 'Aa31LG2G7410' => 'aar', 'Aa31LG6G10200' => 'aar', 'Aa31LG6G16680' => 'aar', 'Aa31LG6G8470' => 'aar', 'Aa31LG9G12730' => 'aar', 'Aa31LG9G13680' => 'aar', 'Aa31LG9G14920' => 'aar', 'Aa31LG9G6650' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4977' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5467' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3254' => 'aag', 'Actinidia02578' => 'ach', 'Actinidia07693' => 'ach', 'Actinidia08413' => 'ach', 'Actinidia08414' => 'ach', 'Actinidia15289' => 'ach', 'Actinidia19871' => 'ach', 'Actinidia21475' => 'ach', 'Actinidia22576' => 'ach', 'Actinidia28327' => 'ach', 'Actinidia32491' => 'ach', 'Actinidia39463' => 'ach', 'Actinidia39571' => 'ach', 'Ah.01g013750' => 'amhyb', 'Ah.01g023210' => 'amhyb', 'Ah.04g164850' => 'amhyb', 'Ah.05g178060' => 'amhyb', 'Ah.07g204270' => 'amhyb', 'Ah.07g208480' => 'amhyb', 'Ah.09g237410' => 'amhyb', 'Ah.14g089460' => 'amhyb', 'AL1G41790' => 'aly', 'AL1G49050' => 'aly', 'AL1G53810' => 'aly', 'AL1G61400' => 'aly', 'AL4G18580' => 'aly', 'AL5G12510' => 'aly', 'AL5G12540' => 'aly', 'AL6G43230' => 'aly', 'AL7G10370' => 'aly', 'AL7G19250' => 'aly', 'AL8G12240' => 'aly', 'AL8G18540' => 'aly', 'Aqoxy1G02409' => 'aox', 'Aqoxy2G03993' => 'aox', 'Aqoxy3G03357' => 'aox', 'Aqoxy4G00785' => 'aox', 'Aqoxy5G02598' => 'aox', 'Aqoxy6G00132' => 'aox', 'Aqoxy7G01776' => 'aox', 'Aqoxy7G02316' => 'aox', 'Aqoxy7G03973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.12AFKW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B8730' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27IQR1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3F75VG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3RE0GA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41TCQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.527VTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FIR39' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5W8UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DA38EV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ63HS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H1I32C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HC27T5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4M8AP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7N3CZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9UVDZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LS1NQA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT1D4B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SKC4TM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCFV76' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF9Q1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQWD9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1ZM88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WE07RT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YCK7VH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJE6Q6' => 'arhy', 'AT1G28240' => 'ath', 'AT1G34550' => 'ath', 'AT1G53040' => 'ath', 'AT2G02910' => 'ath', 'AT4G09630' => 'ath', 'AT4G38500' => 'ath', 'AT5G42660' => 'ath', 'AT5G46220' => 'ath', 'ATR0152G026' => 'atr', 'ATR0564G343' => 'atr', 'ATR0706G151' => 'atr', 'ATR0733G207' => 'atr', 'ATR0751G234' => 'atr', 'ATR0807G048' => 'atr', 'ATR1091G084' => 'atr', 'Atru.chr10.1229' => 'acertr', 'Atru.chr10.1230' => 'acertr', 'Atru.chr10.1874' => 'acertr', 'Atru.chr11.1808' => 'acertr', 'Atru.chr13.1795' => 'acertr', 'Atru.chr13.570' => 'acertr', 'Atru.chr2.2608' => 'acertr', 'Atru.chr2.2609' => 'acertr', 'Atru.chr5.3428' => 'acertr', 'Atru.chr8.1171' => 'acertr', 'AUR62004651' => 'cqu', 'AUR62008675' => 'cqu', 'AUR62010014' => 'cqu', 'AUR62013004' => 'cqu', 'AUR62014825' => 'cqu', 'AUR62015015' => 'cqu', 'AUR62015151' => 'cqu', 'AUR62017020' => 'cqu', 'AUR62019422' => 'cqu', 'AUR62023570' => 'cqu', 'AUR62025571' => 'cqu', 'AUR62029098' => 'cqu', 'AUR62033863' => 'cqu', 'AUR62034296' => 'cqu', 'AUR62040075' => 'cqu', 'BcaB02g07334' => 'bca', 'BcaB02g10575' => 'bca', 'BcaB03g12119' => 'bca', 'BcaB03g12120' => 'bca', 'BcaB03g13945' => 'bca', 'BcaB04g17123' => 'bca', 'BcaB04g17867' => 'bca', 'BcaB04g19839' => 'bca', 'BcaB07g30317' => 'bca', 'BcaB07g32432' => 'bca', 'BcaB07g33362' => 'bca', 'BcaB08g36611' => 'bca', 'BcaC01g00028' => 'bca', 'BcaC01g01356' => 'bca', 'BcaC01g02034' => 'bca', 'BcaC01g06051' => 'bca', 'BcaC03g16839' => 'bca', 'BcaC03g17176' => 'bca', 'BcaC05g26829' => 'bca', 'BcaC06g31490' => 'bca', 'BcaC06g35344' => 'bca', 'BcaC06g36570' => 'bca', 'BcaC07g37537' => 'bca', 'BcaC08g43491' => 'bca', 'BcaC08g43773' => 'bca', 'BcaNung00234' => 'bca', 'BcaNung01982' => 'bca', 'BcaNung03707' => 'bca', 'BcaNung06454' => 'bca', 'BolC2t10762H' => 'bol', 'BolC2t11191H' => 'bol', 'BolC3t14322H' => 'bol', 'BolC3t19747H' => 'bol', 'BolC3t21425H' => 'bol', 'BolC4t27800H' => 'bol', 'BolC5t31423H' => 'bol', 'BolC6t35951H' => 'bol', 'BolC6t36282H' => 'bol', 'BolC7t40678H' => 'bol', 'BolC7t40679H' => 'bol', 'BolC7t42222H' => 'bol', 'BolC7t43492H' => 'bol', 'BolC7t46785H' => 'bol', 'BolC8t47853H' => 'bol', 'BolC9t56805H' => 'bol', 'BraA02t08000Z' => 'bra', 'BraA02t08341Z' => 'bra', 'BraA03t10936Z' => 'bra', 'BraA03t15657Z' => 'bra', 'BraA04t18100Z' => 'bra', 'BraA05t20523Z' => 'bra', 'BraA06t23353Z' => 'bra', 'BraA06t27473Z' => 'bra', 'BraA06t27769Z' => 'bra', 'BraA07t28928Z' => 'bra', 'BraA08t32236Z' => 'bra', 'BraA08t32841Z' => 'bra', 'BraA08t34524Z' => 'bra', 'BraA09t38742Z' => 'bra', 'BraA09t39295Z' => 'bra', 'C02p47180' => 'bna', 'C02p50990' => 'bna', 'C03p19360' => 'bna', 'C03p74950' => 'bna', 'C03p91000' => 'bna', 'C04p63260' => 'bna', 'C05p27050' => 'bna', 'C06p08750' => 'bna', 'C06p11490' => 'bna', 'C07p02820' => 'bna', 'C07p17180' => 'bna', 'C07p29440' => 'bna', 'C07p63730' => 'bna', 'C09p39260' => 'bna', 'CAN.G1164.34' => 'can', 'CAN.G1164.39' => 'can', 'CAN.G1530.3' => 'can', 'CAN.G162.61' => 'can', 'CAN.G176.6' => 'can', 'CAN.G289.49' => 'can', 'CAN.G370.21' => 'can', 'CAN.G370.22' => 'can', 'CAN.G371.117' => 'can', 'CAN.G58.37' => 'can', 'CAN.G588.98' => 'can', 'CANSAT21G2266' => 'cansat', 'CANSAT25G2799' => 'cansat', 'CANSAT35G0862' => 'cansat', 'CANSAT35G1704' => 'cansat', 'CANSAT35G1760' => 'cansat', 'CANSAT56G3971' => 'cansat', 'CANSAT56G4116' => 'cansat', 'CANSAT80G1259' => 'cansat', 'CARHR027730' => 'chi', 'CARHR033880' => 'chi', 'CARHR043270' => 'chi', 'CARHR145330' => 'chi', 'CARHR145340' => 'chi', 'CARHR175570' => 'chi', 'CARHR181570' => 'chi', 'CARHR258470' => 'chi', 'CARHR260490' => 'chi', 'CARHR294220' => 'chi', 'Carub.0001s2668' => 'cru', 'Carub.0001s3257' => 'cru', 'Carub.0001s4220' => 'cru', 'Carub.0005s0179' => 'cru', 'Carub.0006s2807' => 'cru', 'Carub.0007s0039' => 'cru', 'Carub.0008s0169' => 'cru', 'Carub.0008s0636' => 'cru', 'Ca_00338_v3' => 'car', 'Ca_00542_v3' => 'car', 'Ca_01844_v3' => 'car', 'Ca_10611_v3' => 'car', 'Ca_13326_v3' => 'car', 'Ca_17944_v3' => 'car', 'Ca_18546_v3' => 'car', 'Ca_24219_v3' => 'car', 'Ca_29972_v3' => 'car', 'CBR_g3681' => 'cbr', 'CBR_g40021' => 'cbr', 'Cc01_g08140' => 'ccan', 'Cc02_g13410' => 'ccan', 'Cc02_g37480' => 'ccan', 'Cc05_g12030' => 'ccan', 'Cc09_g03370' => 'ccan', 'Cc09_g10300' => 'ccan', 'Cc10_g03530' => 'ccan', 'Cc10_g11380' => 'ccan', 'CDE01G0176' => 'cde', 'CDE02G0675' => 'cde', 'CDE02G0942' => 'cde', 'CDE02G1153' => 'cde', 'CDE02G4177' => 'cde', 'CDE04G2117' => 'cde', 'CDE04G2736' => 'cde', 'CDE08G1161' => 'cde', 'CDE09G1238' => 'cde', 'Cfa000467' => 'cfa', 'Cfa000947' => 'cfa', 'Cfa004969' => 'cfa', 'Cfa005284' => 'cfa', 'Cfa008993' => 'cfa', 'Cfa018187' => 'cfa', 'Cfa018454' => 'cfa', 'Cfa020585' => 'cfa', 'Ciclev10000424m.g' => 'ccl', 'Ciclev10003605m.g' => 'ccl', 'Ciclev10007828m.g' => 'ccl', 'Ciclev10014620m.g' => 'ccl', 'Ciclev10015169m.g' => 'ccl', 'Ciclev10018291m.g' => 'ccl', 'Ciclev10028256m.g' => 'ccl', 'Ciclev10033822m.g' => 'ccl', 'CiPaw.05G060300' => 'cil', 'CiPaw.05G085000' => 'cil', 'CiPaw.06G083700' => 'cil', 'CiPaw.06G120300' => 'cil', 'CiPaw.09G060500' => 'cil', 'CiPaw.09G123800' => 'cil', 'CiPaw.11G169700' => 'cil', 'CiPaw.12G118300' => 'cil', 'CiPaw.15G071000' => 'cil', 'CiPaw.15G081900' => 'cil', 'ClCG01G024610' => 'cla', 'ClCG03G006070' => 'cla', 'ClCG05G019250' => 'cla', 'ClCG09G009500' => 'cla', 'ClCG11G008200' => 'cla', 'ClCG11G018080' => 'cla', 'COL.COLO4_17373' => 'col', 'COL.COLO4_22994' => 'col', 'COL.COLO4_26389' => 'col', 'COL.COLO4_27170' => 'col', 'COL.COLO4_31074' => 'col', 'COL.COLO4_31465' => 'col', 'COL.COLO4_36438' => 'col', 'COL.COLO4_36439' => 'col', 'Cpa.g.c38781' => 'cpa', 'Cpa.g.sc128.12' => 'cpa', 'Cpa.g.sc166.7' => 'cpa', 'Cpa.g.sc166.8' => 'cpa', 'Cpa.g.sc20.111' => 'cpa', 'Cpa.g.sc27.31' => 'cpa', 'Cpa.g.sc64.36' => 'cpa', 'Cpa.g.sc64.37' => 'cpa', 'Cpa.g.sc66.49' => 'cpa', 'Cpa.g.sc80.64' => 'cpa', 'CsaV3_1G012320' => 'csa', 'CsaV3_2G008480' => 'csa', 'CsaV3_2G033450' => 'csa', 'CsaV3_3G044830' => 'csa', 'CsaV3_4G033710' => 'csa', 'CsaV3_6G051730' => 'csa', 'CsaV3_7G025350' => 'csa', 'CSS0001067' => 'camsi', 'CSS0005996' => 'camsi', 'CSS0006590' => 'camsi', 'CSS0009673' => 'camsi', 'CSS0010201' => 'camsi', 'CSS0010549' => 'camsi', 'CSS0011364' => 'camsi', 'CSS0014473' => 'camsi', 'CSS0014961' => 'camsi', 'CSS0020191' => 'camsi', 'CSS0021165' => 'camsi', 'CSS0022306' => 'camsi', 'CSS0030591' => 'camsi', 'CSS0030696' => 'camsi', 'CSS0032653' => 'camsi', 'CSS0037487' => 'camsi', 'CSS0041102' => 'camsi', 'CSS0041261' => 'camsi', 'CSS0046246' => 'camsi', 'CSS0049256' => 'camsi', 'DCAR_004075' => 'dca', 'DCAR_011538' => 'dca', 'DCAR_019553' => 'dca', 'DCAR_020952' => 'dca', 'DCAR_021739' => 'dca', 'DCAR_027407' => 'dca', 'DCAR_027913' => 'dca', 'DCAR_028066' => 'dca', 'Dinv05899' => 'din', 'Dinv07563' => 'din', 'Dinv08010' => 'din', 'Dinv14125' => 'din', 'Dinv20172' => 'din', 'Dinv30743' => 'din', 'Dinv31229' => 'din', 'Dinv34162' => 'din', 'Dinv36028' => 'din', 'Dinv39368' => 'din', 'Dinv40565' => 'din', 'Dinv41706' => 'din', 'Duzib052G0089' => 'dzi', 'Duzib116G0641' => 'dzi', 'Duzib132G0069' => 'dzi', 'Duzib132G1219' => 'dzi', 'Duzib147G0278' => 'dzi', 'Duzib160G0480' => 'dzi', 'Duzib170G0661' => 'dzi', 'Duzib177G0591' => 'dzi', 'Duzib187G1353' => 'dzi', 'Duzib192G0858' => 'dzi', 'Duzib192G0883' => 'dzi', 'Duzib213G0506' => 'dzi', 'Duzib235G0289' => 'dzi', 'Duzib251G0422' => 'dzi', 'ECA232G3898' => 'eca', 'ECA233G5950' => 'eca', 'ECA234G1699' => 'eca', 'ECA234G2421' => 'eca', 'ECA236G0426' => 'eca', 'ECA236G4331' => 'eca', 'ECA248G2573' => 'eca', 'EL10Ac1g00077' => 'bvu', 'EL10Ac1g01746' => 'bvu', 'EL10Ac2g03464' => 'bvu', 'EL10Ac4g08176' => 'bvu', 'EL10Ac7g17521' => 'bvu', 'EL10Ac8g20386' => 'bvu', 'EL10Ac9g21343' => 'bvu', 'EL10Ac9g22688' => 'bvu', 'Eucgr.B03434' => 'egr', 'Eucgr.D00618' => 'egr', 'Eucgr.E02395' => 'egr', 'Eucgr.F01129' => 'egr', 'Eucgr.F02622' => 'egr', 'Eucgr.F04207' => 'egr', 'FAN01G0570' => 'fan', 'FAN03G3351' => 'fan', 'FAN06G3702' => 'fan', 'FAN07G2149' => 'fan', 'FAN10G3758' => 'fan', 'FAN11G1170' => 'fan', 'FAN11G2050' => 'fan', 'FAN11G2724' => 'fan', 'FAN12G1700' => 'fan', 'FAN12G2028' => 'fan', 'FAN15G1160' => 'fan', 'FAN15G3063' => 'fan', 'FAN16G2540' => 'fan', 'FAN16G3077' => 'fan', 'FAN16G3624' => 'fan', 'FAN17G0221' => 'fan', 'FAN20G2492' => 'fan', 'FAN20G2905' => 'fan', 'FAN21G0548' => 'fan', 'FAN21G1300' => 'fan', 'FAN22G0077' => 'fan', 'FAN22G1315' => 'fan', 'FAN24G1280' => 'fan', 'FAN24G1445' => 'fan', 'FAN24G3527' => 'fan', 'FAN25G0464' => 'fan', 'FAN25G2885' => 'fan', 'FAN25G3270' => 'fan', 'FAN27G1101' => 'fan', 'FAN27G2846' => 'fan', 'FAN27G3524' => 'fan', 'FvH4_2g11770' => 'fve', 'FvH4_2g15630' => 'fve', 'FvH4_3g05570' => 'fve', 'FvH4_3g09110' => 'fve', 'FvH4_3g19940' => 'fve', 'FvH4_4g04821' => 'fve', 'FvH4_4g31480' => 'fve', 'FvH4_7g01740' => 'fve', 'Glyma.05G130400' => 'gma', 'Glyma.05G156400' => 'gma', 'Glyma.07G197000' => 'gma', 'Glyma.08G085151' => 'gma', 'Glyma.08G114500' => 'gma', 'Glyma.08G300400' => 'gma', 'Glyma.10G215800' => 'gma', 'Glyma.12G224400' => 'gma', 'Glyma.13G179300' => 'gma', 'Glyma.13G218151' => 'gma', 'Glyma.13G238800' => 'gma', 'Glyma.13G276900' => 'gma', 'Glyma.14G078200' => 'gma', 'Glyma.15G074500' => 'gma', 'Glyma.15G094100' => 'gma', 'Glyma.17G247200' => 'gma', 'Glyma.18G120100' => 'gma', 'Glyma.20G176000' => 'gma', 'Gohir.A01G063600' => 'ghi', 'Gohir.A01G170301' => 'ghi', 'Gohir.A02G060500' => 'ghi', 'Gohir.A05G133850' => 'ghi', 'Gohir.A05G161400' => 'ghi', 'Gohir.A06G012900' => 'ghi', 'Gohir.A06G035901' => 'ghi', 'Gohir.A06G127100' => 'ghi', 'Gohir.A06G210500' => 'ghi', 'Gohir.A08G008650' => 'ghi', 'Gohir.A09G072700' => 'ghi', 'Gohir.A09G088301' => 'ghi', 'Gohir.A10G040600' => 'ghi', 'Gohir.A12G036300' => 'ghi', 'Gohir.A12G143350' => 'ghi', 'Gohir.A12G165500' => 'ghi', 'Gohir.A13G145700' => 'ghi', 'Gohir.D01G050000' => 'ghi', 'Gohir.D01G051366' => 'ghi', 'Gohir.D01G161350' => 'ghi', 'Gohir.D02G065900' => 'ghi', 'Gohir.D05G164200' => 'ghi', 'Gohir.D05G355500' => 'ghi', 'Gohir.D06G010400' => 'ghi', 'Gohir.D06G111250' => 'ghi', 'Gohir.D06G132000' => 'ghi', 'Gohir.D06G210500' => 'ghi', 'Gohir.D07G165675' => 'ghi', 'Gohir.D08G062240' => 'ghi', 'Gohir.D08G086101' => 'ghi', 'Gohir.D08G138060' => 'ghi', 'Gohir.D09G072300' => 'ghi', 'Gohir.D10G041400' => 'ghi', 'Gohir.D11G191020' => 'ghi', 'Gohir.D11G212066' => 'ghi', 'Gohir.D12G036300' => 'ghi', 'Gohir.D12G168600' => 'ghi', 'Gohir.D13G150600' => 'ghi', 'Gorai.001G057300' => 'gra', 'Gorai.002G069900' => 'gra', 'Gorai.002G200000' => 'gra', 'Gorai.003G067600' => 'gra', 'Gorai.005G074800' => 'gra', 'Gorai.006G087300' => 'gra', 'Gorai.008G037500' => 'gra', 'Gorai.008G181400' => 'gra', 'Gorai.009G169400' => 'gra', 'Gorai.009G387900' => 'gra', 'Gorai.010G013300' => 'gra', 'Gorai.010G153800' => 'gra', 'Gorai.010G255800' => 'gra', 'Gorai.011G043700' => 'gra', 'Gorai.011G198900' => 'gra', 'Gorai.013G168400' => 'gra', 'GSVIVG01005212001' => 'vvi', 'GSVIVG01006163001' => 'vvi', 'GSVIVG01009625001' => 'vvi', 'GSVIVG01014338001' => 'vvi', 'GSVIVG01020005001' => 'vvi', 'GSVIVG01021450001' => 'vvi', 'GSVIVG01023975001' => 'vvi', 'GSVIVG01034490001' => 'vvi', 'HanXRQChr04g0112071' => 'han', 'HanXRQChr05g0131151' => 'han', 'HanXRQChr09g0262371' => 'han', 'HanXRQChr09g0268401' => 'han', 'HanXRQChr10g0279241' => 'han', 'HanXRQChr10g0297961' => 'han', 'HanXRQChr11g0326231' => 'han', 'HanXRQChr11g0328471' => 'han', 'HanXRQChr16g0507941' => 'han', 'HanXRQChr17g0560211' => 'han', 'Haze_02108' => 'cav', 'Haze_02428' => 'cav', 'Haze_05593' => 'cav', 'Haze_06448' => 'cav', 'Haze_09427' => 'cav', 'Haze_12022' => 'cav', 'Haze_17612' => 'cav', 'Haze_17928' => 'cav', 'Hma1.2p1_0032F.1_g019250' => 'hma', 'Hma1.2p1_0163F.1_g072690' => 'hma', 'Hma1.2p1_0265F.1_g106710' => 'hma', 'Hma1.2p1_0286F.1_g113970' => 'hma', 'Hma1.2p1_0363F.1_g136640' => 'hma', 'Hma1.2p1_0584F.1_g183470' => 'hma', 'Hma1.2p1_0885F.1_g232570' => 'hma', 'HPP92_006022' => 'vpl', 'HPP92_007320' => 'vpl', 'HPP92_011521' => 'vpl', 'HPP92_019387' => 'vpl', 'HPP92_024038' => 'vpl', 'Hund05891' => 'sun', 'Hund06450' => 'sun', 'Hund12053' => 'sun', 'Hund16800' => 'sun', 'Hund21222' => 'sun', 'Hund22896' => 'sun', 'Hund23746' => 'sun', 'Hund27083' => 'sun', 'Lalb_Chr02g0141831' => 'lal', 'Lalb_Chr02g0141841' => 'lal', 'Lalb_Chr05g0220411' => 'lal', 'Lalb_Chr06g0162081' => 'lal', 'Lalb_Chr09g0327651' => 'lal', 'Lalb_Chr13g0295051' => 'lal', 'Lalb_Chr15g0086801' => 'lal', 'Lalb_Chr16g0383781' => 'lal', 'Lalb_Chr16g0383791' => 'lal', 'Lalb_Chr18g0055441' => 'lal', 'Lalb_Chr18g0059611' => 'lal', 'Lalb_Chr20g0109661' => 'lal', 'Lalb_Chr20g0109831' => 'lal', 'Lalb_Chr20g0121871' => 'lal', 'Lalb_Chr22g0355361' => 'lal', 'Lalb_Chr25g0286371' => 'lal', 'Lj1A1187G43' => 'lonja', 'Lj1A1205T50' => 'lonja', 'Lj1A800G33' => 'lonja', 'Lj1C1187T7' => 'lonja', 'Lj1C843T11' => 'lonja', 'Lj1g0010940' => 'lja', 'Lj2A288T69' => 'lonja', 'Lj3g0024276' => 'lja', 'Lj4A47T76' => 'lonja', 'Lj4g0005805' => 'lja', 'Lj4g0006097' => 'lja', 'Lj4g0008528' => 'lja', 'Lj4g0024907' => 'lja', 'Lj5g0012472' => 'lja', 'Lj5g0018648' => 'lja', 'Lj6C789G1' => 'lonja', 'Lj6g0004000' => 'lja', 'Lj7A292G67' => 'lonja', 'Lj7A292T64' => 'lonja', 'Lj9A400T58' => 'lonja', 'Lsat_1_v5_gn_1_126181' => 'lsa', 'Lsat_1_v5_gn_4_123041' => 'lsa', 'Lsat_1_v5_gn_4_133620' => 'lsa', 'Lsat_1_v5_gn_4_53221' => 'lsa', 'Lsat_1_v5_gn_4_71961' => 'lsa', 'Lsat_1_v5_gn_7_105241' => 'lsa', 'Lsat_1_v5_gn_7_21361' => 'lsa', 'Lsat_1_v5_gn_7_28860' => 'lsa', 'Lsat_1_v5_gn_7_31260' => 'lsa', 'Lsat_1_v5_gn_8_52801' => 'lsa', 'Manes.02G191400' => 'mes', 'Manes.03G110100' => 'mes', 'Manes.04G071100' => 'mes', 'Manes.05G100500' => 'mes', 'Manes.05G164700' => 'mes', 'Manes.15G087000' => 'mes', 'Manes.15G121500' => 'mes', 'Manes.16G028300' => 'mes', 'Manes.17G046100' => 'mes', 'Manes.17G069800' => 'mes', 'Manes.18G100500' => 'mes', 'Mapoly0002s0109' => 'mpo', 'Mapoly0024s0007' => 'mpo', 'Mapoly0089s0032' => 'mpo', 'MBI04_g42241_MAGBIO' => 'mbi', 'MBI05_g11988_MAGBIO' => 'mbi', 'MBI05_g35452_MAGBIO' => 'mbi', 'MBI07_g30179_MAGBIO' => 'mbi', 'MBI07_g35859_MAGBIO' => 'mbi', 'MBI07_g35860_MAGBIO' => 'mbi', 'MBI07_g37166_MAGBIO' => 'mbi', 'MBI08_g18172_MAGBIO' => 'mbi', 'MBI09_g08441_MAGBIO' => 'mbi', 'MBI13_g01676_MAGBIO' => 'mbi', 'MBI14_g42955_MAGBIO' => 'mbi', 'MBI16_g13161_MAGBIO' => 'mbi', 'MBI17_g27204_MAGBIO' => 'mbi', 'MBI19_g21595_MAGBIO' => 'mbi', 'MD00G1148400' => 'mdo', 'MD02G1301200' => 'mdo', 'MD03G1227800' => 'mdo', 'MD05G1041100' => 'mdo', 'MD05G1124800' => 'mdo', 'MD05G1284000' => 'mdo', 'MD05G1338800' => 'mdo', 'MD05G1338900' => 'mdo', 'MD07G1022800' => 'mdo', 'MD10G1047500' => 'mdo', 'MD10G1127500' => 'mdo', 'MD10G1262300' => 'mdo', 'MD10G1293800' => 'mdo', 'MD16G1074300' => 'mdo', 'Medtr1g021670' => 'mtr', 'Medtr1g096320' => 'mtr', 'Medtr2g013690' => 'mtr', 'Medtr2g019450' => 'mtr', 'Medtr2g085170' => 'mtr', 'Medtr4g088785' => 'mtr', 'Medtr8g055930' => 'mtr', 'Medtr8g085850' => 'mtr', 'MELO3C002605.2' => 'cme', 'MELO3C003891.2' => 'cme', 'MELO3C004012.2' => 'cme', 'MELO3C007134.2' => 'cme', 'MELO3C008118.2' => 'cme', 'MELO3C016700.2' => 'cme', 'MELO3C024127.2' => 'cme', 'MELO3C033361.2' => 'cme', 'MELO3C033362.2' => 'cme', 'Migut.C00430' => 'egut', 'Migut.C01246' => 'egut', 'Migut.E00101' => 'egut', 'Migut.H01486' => 'egut', 'Migut.H01939' => 'egut', 'Migut.K00360' => 'egut', 'Migut.M00910' => 'egut', 'Migut.M01139' => 'egut', 'Migut.N02677' => 'egut', 'MSTRG.13252' => 'ama', 'MSTRG.14701' => 'ama', 'MSTRG.1521' => 'ama', 'MSTRG.15884' => 'ama', 'MSTRG.16242' => 'ama', 'MSTRG.22285' => 'ama', 'MSTRG.22444' => 'ama', 'MSTRG.2349' => 'ama', 'MSTRG.26308' => 'ama', 'MSTRG.28296' => 'ama', 'MSTRG.9895' => 'ama', 'Nitab4.5_0000110g0060' => 'nta', 'Nitab4.5_0000420g0130' => 'nta', 'Nitab4.5_0000422g0030' => 'nta', 'Nitab4.5_0000560g0180' => 'nta', 'Nitab4.5_0000703g0100' => 'nta', 'Nitab4.5_0000786g0200' => 'nta', 'Nitab4.5_0001336g0020' => 'nta', 'Nitab4.5_0001796g0030' => 'nta', 'Nitab4.5_0003348g0060' => 'nta', 'Nitab4.5_0003698g0040' => 'nta', 'Nitab4.5_0003942g0090' => 'nta', 'Nitab4.5_0004775g0070' => 'nta', 'Nitab4.5_0004864g0030' => 'nta', 'Nitab4.5_0005615g0020' => 'nta', 'Nitab4.5_0009288g0030' => 'nta', 'Nitab4.5_0009341g0010' => 'nta', 'Nitab4.5_0009535g0010' => 'nta', 'Nn1g03995' => 'nnu', 'Nn1g04100' => 'nnu', 'Nn1g06530' => 'nnu', 'Nn3g16404' => 'nnu', 'Nn3g17212' => 'nnu', 'Nn3g20776' => 'nnu', 'Nn3g21923' => 'nnu', 'Nn5g27737' => 'nnu', 'Nn5g29461' => 'nnu', 'Nn7g38355' => 'nnu', 'Nn8g39873' => 'nnu', 'Oeu000548.2' => 'oeu', 'Oeu004672.1' => 'oeu', 'Oeu015605.2' => 'oeu', 'Oeu016092.1' => 'oeu', 'Oeu017879.3' => 'oeu', 'Oeu024910.1' => 'oeu', 'Oeu028965.1' => 'oeu', 'Oeu031269.1' => 'oeu', 'Oeu031270.1' => 'oeu', 'Oeu032535.1' => 'oeu', 'Oeu034151.1' => 'oeu', 'Oeu034152.1' => 'oeu', 'Oeu034588.2' => 'oeu', 'Oeu050846.1' => 'oeu', 'Oeu050849.2' => 'oeu', 'Oeu051063.2' => 'oeu', 'Oeu052368.1' => 'oeu', 'Oeu052370.1' => 'oeu', 'Os01g0210400' => 'osa', 'Os01g0304300' => 'osa', 'Os01g0749100' => 'osa', 'Os02g0745800' => 'osa', 'Os03g0769050' => 'osa', 'Os05g0531500' => 'osa', 'Os06g0724300' => 'osa', 'Os11g0198100' => 'osa', 'Peaxi162Scf00069g01425' => 'pax', 'Peaxi162Scf00280g00811' => 'pax', 'Peaxi162Scf00310g00615' => 'pax', 'Peaxi162Scf00362g00542' => 'pax', 'Peaxi162Scf00461g00310' => 'pax', 'Peaxi162Scf00530g00118' => 'pax', 'Peaxi162Scf00541g00057' => 'pax', 'Peaxi162Scf00661g00017' => 'pax', 'Peaxi162Scf00926g00027' => 'pax', 'Peaxi162Scf01064g00263' => 'pax', 'Peaxi162Scf01211g00135' => 'pax', 'PGR004G2336' => 'pgr', 'PGR042G0327' => 'pgr', 'PGR042G1957' => 'pgr', 'PGR042G2003' => 'pgr', 'PGR042G3929' => 'pgr', 'PGR083G1137' => 'pgr', 'PGR083G1364' => 'pgr', 'PGSC0003DMG400003381' => 'stu', 'PGSC0003DMG400003417' => 'stu', 'PGSC0003DMG400008981' => 'stu', 'PGSC0003DMG400012417' => 'stu', 'PGSC0003DMG400012823' => 'stu', 'PGSC0003DMG400016885' => 'stu', 'PGSC0003DMG400022812' => 'stu', 'PGSC0003DMG400029726' => 'stu', 'PGSC0003DMG401009243' => 'stu', 'PGSC0003DMG401031505' => 'stu', 'PGSC0003DMG402031505' => 'stu', 'Phvul.001G017600' => 'pvu', 'Phvul.002G193500' => 'pvu', 'Phvul.002G228900' => 'pvu', 'Phvul.002G236800' => 'pvu', 'Phvul.003G049500' => 'pvu', 'Phvul.005G072000' => 'pvu', 'Phvul.006G164800' => 'pvu', 'Phvul.006G185100' => 'pvu', 'Phvul.007G090000' => 'pvu', 'Potri.001G399800' => 'ptr', 'Potri.002G149900' => 'ptr', 'Potri.004G044100' => 'ptr', 'Potri.004G177600' => 'ptr', 'Potri.009G138000' => 'ptr', 'Potri.010G094000' => 'ptr', 'Potri.011G053000' => 'ptr', 'Potri.011G119300' => 'ptr', 'Potri.013G113700' => 'ptr', 'Potri.018G107800' => 'ptr', 'Potri.019G084100' => 'ptr', 'Pp3c14_23720' => 'ppa', 'Pp3c16_6340' => 'ppa', 'Pp3c23_13420' => 'ppa', 'Pp3c24_2740' => 'ppa', 'Pp3c25_860' => 'ppa', 'Pp3c8_21750' => 'ppa', 'Prupe.1G273000' => 'ppe', 'Prupe.1G273700' => 'ppe', 'Prupe.1G274100' => 'ppe', 'Prupe.2G023300' => 'ppe', 'Prupe.4G048000' => 'ppe', 'Prupe.4G080400' => 'ppe', 'Prupe.4G181200' => 'ppe', 'Prupe.8G056900' => 'ppe', 'Prupe.8G168700' => 'ppe', 'Psat1g189080' => 'psa', 'Psat1g204760' => 'psa', 'Psat4g175560' => 'psa', 'Psat4g177720' => 'psa', 'Psat5g244240' => 'psa', 'Psat6g010720' => 'psa', 'Psat6g187200' => 'psa', 'Psat7g072040' => 'psa', 'PSO017G3501' => 'pso', 'PSO063G2148' => 'pso', 'PSO063G5608' => 'pso', 'PSO210G6392' => 'pso', 'PSO541G2319' => 'pso', 'PSO541G2836' => 'pso', 'PSO541G4012' => 'pso', 'PSO541G6253' => 'pso', 'PSO675G0580' => 'pso', 'PSO675G0856' => 'pso', 'PSO675G5635' => 'pso', 'PSO675G9157' => 'pso', 'PSO832G1660' => 'pso', 'PSO832G1969' => 'pso', 'QL02p007186' => 'qlo', 'QL02p033904' => 'qlo', 'QL03p064391' => 'qlo', 'QL05p040593' => 'qlo', 'QL05p058242' => 'qlo', 'QL08p021825' => 'qlo', 'QL11p004981' => 'qlo', 'RcHm_v2.0_Chr1g0318301' => 'rch', 'RcHm_v2.0_Chr4g0418501' => 'rch', 'RcHm_v2.0_Chr4g0439971' => 'rch', 'RcHm_v2.0_Chr5g0008541' => 'rch', 'RcHm_v2.0_Chr5g0014101' => 'rch', 'RcHm_v2.0_Chr5g0014131' => 'rch', 'RcHm_v2.0_Chr5g0033621' => 'rch', 'RcHm_v2.0_Chr6g0272041' => 'rch', 'RcHm_v2.0_Chr6g0278831' => 'rch', 'Rhsim02G0130400' => 'rsi', 'Rhsim02G0171100' => 'rsi', 'Rhsim05G0053000' => 'rsi', 'Rhsim05G0053100' => 'rsi', 'Rhsim06G0096500' => 'rsi', 'Rhsim06G0096600' => 'rsi', 'Rhsim06G0199100' => 'rsi', 'Rhsim12G0062300' => 'rsi', 'Rhsim12G0062800' => 'rsi', 'Sabra02G0118600' => 'sbr', 'Sabra04G0027300' => 'sbr', 'Sabra04G0119500' => 'sbr', 'Sabra08G0112500' => 'sbr', 'Sabra11G0036800' => 'sbr', 'Sabra11G0103800' => 'sbr', 'Sabra13G0096300' => 'sbr', 'Sabra16G0262300' => 'sbr', 'Sabra18G0091700' => 'sbr', 'Sabra19G0095400' => 'sbr', 'SalBow6G3080' => 'sbo', 'SalBow7G1157' => 'sbo', 'SalBow7G2123' => 'sbo', 'SalBow7G2285' => 'sbo', 'SalBow7G3537' => 'sbo', 'SalBow8G2947' => 'sbo', 'SalBow8G4463' => 'sbo', 'SalBow8G5466' => 'sbo', 'Sc01g0001750' => 'sci', 'Sc02g0006640' => 'sci', 'Sc02g0006670' => 'sci', 'Sc04g0008220' => 'sci', 'Sc05g0006190' => 'sci', 'Sc08g0002760' => 'sci', 'Sc17g0006170' => 'sci', 'Sc22g0002050' => 'sci', 'Sc23g0001190' => 'sci', 'Sc24g0000980' => 'sci', 'Sed0006245' => 'sed', 'Sed0007543' => 'sed', 'Sed0009411' => 'sed', 'Sed0010765' => 'sed', 'Sed0012944' => 'sed', 'Sed0014682' => 'sed', 'Sed0016174' => 'sed', 'Sed0016796' => 'sed', 'Sed0020317' => 'sed', 'Sed0021467' => 'sed', 'SEGI_01316' => 'sgi', 'SEGI_03374' => 'sgi', 'SEGI_16265' => 'sgi', 'SEGI_18569' => 'sgi', 'SEGI_20351' => 'sgi', 'SEGI_26395' => 'sgi', 'SEGI_29469' => 'sgi', 'SEGI_34771' => 'sgi', 'SEGI_36769' => 'sgi', 'SEGI_37139' => 'sgi', 'SGA_v2.0_scaffold100G29687' => 'sas', 'SGA_v2.0_scaffold118G32472' => 'sas', 'SGA_v2.0_scaffold14G07051' => 'sas', 'SGA_v2.0_scaffold183G39845' => 'sas', 'SGA_v2.0_scaffold1G00174' => 'sas', 'SGA_v2.0_scaffold22G09714' => 'sas', 'SGA_v2.0_scaffold333G48992' => 'sas', 'SGA_v2.0_scaffold46G17491' => 'sas', 'SGA_v2.0_scaffold49G18294' => 'sas', 'SGA_v2.0_scaffold63G21658' => 'sas', 'SHI01741' => 'shi', 'SHI05771' => 'shi', 'SHI18077' => 'shi', 'SHI20525' => 'shi', 'SHI20527' => 'shi', 'SHI20528' => 'shi', 'SMO172G0185' => 'smo', 'SMO198G0020' => 'smo', 'SMO351G0006' => 'smo', 'SMO356G0118' => 'smo', 'SMO358G0296' => 'smo', 'SMO367G0079' => 'smo', 'SMO367G1277' => 'smo', 'Solyc01g014220.3' => 'sly', 'Solyc01g111770.2' => 'sly', 'Solyc02g078180.3' => 'sly', 'Solyc03g006430.3' => 'sly', 'Solyc03g006456.1' => 'sly', 'Solyc03g079860.2' => 'sly', 'Solyc04g079770.3' => 'sly', 'Solyc05g007430.4' => 'sly', 'Solyc07g063150.3' => 'sly', 'Solyc08g016620.3' => 'sly', 'Solyc09g057590.3' => 'sly', 'Solyc09g057600.1' => 'sly', 'Solyc10g009050.3' => 'sly', 'Solyc11g017420.2' => 'sly', 'Sopen01g053810' => 'spe', 'Sopen02g023040' => 'spe', 'Sopen03g002440' => 'spe', 'Sopen04g033350' => 'spe', 'Sopen05g003310' => 'spe', 'Sopen07g004050' => 'spe', 'Sopen07g031340' => 'spe', 'Sopen08g006990' => 'spe', 'Sopen10g004830' => 'spe', 'Sopen11g009370' => 'spe', 'Sp1g24450' => 'spa', 'Sp1g29670' => 'spa', 'Sp1g39600' => 'spa', 'Sp2g11080' => 'spa', 'Sp2g13970' => 'spa', 'Sp4g16130' => 'spa', 'Sp6g13080' => 'spa', 'Sp7g37270' => 'spa', 'TAR371G0065' => 'tar', 'TAR376G0340' => 'tar', 'TAR376G0435' => 'tar', 'TAR381G0002' => 'tar', 'TAR381G1236' => 'tar', 'TAR624G0055' => 'tar', 'TAR624G0324' => 'tar', 'TAR624G0696' => 'tar', 'TAR624G0906' => 'tar', 'TAR625G0107' => 'tar', 'TAR626G0015' => 'tar', 'TAR626G1356' => 'tar', 'TAR627G0888' => 'tar', 'TAR628G0399' => 'tar', 'TAR628G1327' => 'tar', 'TAR629G2831' => 'tar', 'TAR629G2874' => 'tar', 'TAR633G1432' => 'tar', 'TAR633G2771' => 'tar', 'THA.LOC104803394' => 'tha', 'THA.LOC104805153' => 'tha', 'THA.LOC104806784' => 'tha', 'THA.LOC104810473' => 'tha', 'THA.LOC104813100' => 'tha', 'THA.LOC104814215' => 'tha', 'THA.LOC104815554' => 'tha', 'THA.LOC104820544' => 'tha', 'THA.LOC104824754' => 'tha', 'THA.LOC104827717' => 'tha', 'Thecc.02G031400' => 'tca', 'Thecc.02G055900' => 'tca', 'Thecc.02G350800' => 'tca', 'Thecc.06G150900' => 'tca', 'Thecc.06G186600' => 'tca', 'Thecc.07G089600' => 'tca', 'Thecc.08G020400' => 'tca', 'Thecc.08G182100' => 'tca', 'Thhalv10000873m.g' => 'esa', 'Thhalv10004185m.g' => 'esa', 'Thhalv10006981m.g' => 'esa', 'Thhalv10007204m.g' => 'esa', 'Thhalv10011374m.g' => 'esa', 'Thhalv10013482m.g' => 'esa', 'Thhalv10017801m.g' => 'esa', 'Thhalv10024983m.g' => 'esa', 'TPR.G12072' => 'tpr', 'TPR.G15769' => 'tpr', 'TPR.G16504' => 'tpr', 'TPR.G16506' => 'tpr', 'TPR.G24345' => 'tpr', 'TPR.G26666' => 'tpr', 'TPR.G27320' => 'tpr', 'TPR.G31819' => 'tpr', 'TPR.G38879' => 'tpr', 'TPR.G39015' => 'tpr', 'TPR.G8819' => 'tpr', 'TWI09G0924' => 'twi', 'TWI12G0811' => 'twi', 'TWI12G1294' => 'twi', 'TWI31G0150' => 'twi', 'TWI36G1262' => 'twi', 'TWI38G1287' => 'twi', 'TWI38G1633' => 'twi', 'TWI38G1982' => 'twi', 'TWI39G0116' => 'twi', 'TWI60G1011' => 'twi', 'TWI63G0171' => 'twi', 'TWI73G0839' => 'twi', 'TWI79G1511' => 'twi', 'unitig_0.g915' => 'ugi', 'unitig_0.g916' => 'ugi', 'unitig_21.g20219' => 'ugi', 'unitig_21.g20416' => 'ugi', 'unitig_578.g16132' => 'ugi', 'unitig_578.g16718' => 'ugi', 'unitig_62.g23481' => 'ugi', 'unitig_744.g24535' => 'ugi', 'unitig_749.g13525' => 'ugi', 'vmacro01248' => 'vma', 'vmacro02290' => 'vma', 'vmacro10946' => 'vma', 'vmacro11865' => 'vma', 'vmacro12493' => 'vma', 'vmacro17322' => 'vma', 'vmacro21599' => 'vma', 'vmacro23041' => 'vma', 'VMungo0251G0004' => 'vmu', 'VMungo0251G2639' => 'vmu', 'VMungo0251G2967' => 'vmu', 'VMungo0540G0864' => 'vmu', 'VMungo0540G1569' => 'vmu', 'VMungo0647G0317' => 'vmu', 'VMungo0720G1373' => 'vmu', 'VMungo0720G1508' => 'vmu', 'VMungo1080G0485' => 'vmu', 'VMungo1215G3177' => 'vmu', 'Zm00001eb112600' => 'zma', 'Zm00001eb120220' => 'zma', 'Zm00001eb153240' => 'zma', 'Zm00001eb168880' => 'zma', 'Zm00001eb213920' => 'zma', 'Zm00001eb228280' => 'zma', 'Zm00001eb254580' => 'zma', 'Zm00001eb272180' => 'zma', 'Zm00001eb293190' => 'zma', 'Zm00001eb322930' => 'zma', 'Zm00001eb353360' => 'zma', 'Zm00001eb353390' => 'zma', 'Zm00001eb353430' => 'zma', 'Zm00001eb353440' => 'zma', 'Zm00001eb353780' => 'zma' ), 'gf_id' => 'HOM05D000499', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000499' ), 'data_identifier' => 'HOM05D000499', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000499', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1066', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p29780' => 'bna', 'A02p33180' => 'bna', 'A03p16470' => 'bna', 'A03p66010' => 'bna', 'A04p25970' => 'bna', 'A06p01270' => 'bna', 'A06p46080' => 'bna', 'A07p11400' => 'bna', 'A08p01840' => 'bna', 'A08p08230' => 'bna', 'A08p25740' => 'bna', 'A09p32070' => 'bna', 'A09p37830' => 'bna', 'A09p42840' => 'bna', 'A09p42850' => 'bna', 'Aa31LG10G2060' => 'aar', 'Aa31LG2G7410' => 'aar', 'Aa31LG6G10200' => 'aar', 'Aa31LG6G16680' => 'aar', 'Aa31LG6G8470' => 'aar', 'Aa31LG9G12730' => 'aar', 'Aa31LG9G13680' => 'aar', 'Aa31LG9G14920' => 'aar', 'Aa31LG9G6650' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4977' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5467' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3254' => 'aag', 'Actinidia02578' => 'ach', 'Actinidia07693' => 'ach', 'Actinidia08413' => 'ach', 'Actinidia08414' => 'ach', 'Actinidia15289' => 'ach', 'Actinidia19871' => 'ach', 'Actinidia21475' => 'ach', 'Actinidia22576' => 'ach', 'Actinidia28327' => 'ach', 'Actinidia32491' => 'ach', 'Actinidia39463' => 'ach', 'Actinidia39571' => 'ach', 'Ah.01g013750' => 'amhyb', 'Ah.01g023210' => 'amhyb', 'Ah.04g164850' => 'amhyb', 'Ah.05g178060' => 'amhyb', 'Ah.07g204270' => 'amhyb', 'Ah.07g208480' => 'amhyb', 'Ah.09g237410' => 'amhyb', 'Ah.14g089460' => 'amhyb', 'AL1G41790' => 'aly', 'AL1G49050' => 'aly', 'AL1G53810' => 'aly', 'AL1G61400' => 'aly', 'AL4G18580' => 'aly', 'AL5G12510' => 'aly', 'AL5G12540' => 'aly', 'AL6G43230' => 'aly', 'AL7G10370' => 'aly', 'AL7G19250' => 'aly', 'AL8G12240' => 'aly', 'AL8G18540' => 'aly', 'Aqoxy1G02409' => 'aox', 'Aqoxy2G03993' => 'aox', 'Aqoxy3G03357' => 'aox', 'Aqoxy4G00785' => 'aox', 'Aqoxy5G02598' => 'aox', 'Aqoxy6G00132' => 'aox', 'Aqoxy7G01776' => 'aox', 'Aqoxy7G02316' => 'aox', 'Aqoxy7G03973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.12AFKW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B8730' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27IQR1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3F75VG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3RE0GA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41TCQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.527VTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FIR39' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5W8UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DA38EV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ63HS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H1I32C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HC27T5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4M8AP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7N3CZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9UVDZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LS1NQA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT1D4B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SKC4TM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCFV76' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF9Q1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQWD9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1ZM88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WE07RT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YCK7VH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJE6Q6' => 'arhy', 'AT1G28240' => 'ath', 'AT1G34550' => 'ath', 'AT1G53040' => 'ath', 'AT2G02910' => 'ath', 'AT4G09630' => 'ath', 'AT4G38500' => 'ath', 'AT5G42660' => 'ath', 'AT5G46220' => 'ath', 'ATR0152G026' => 'atr', 'ATR0564G343' => 'atr', 'ATR0706G151' => 'atr', 'ATR0733G207' => 'atr', 'ATR0751G234' => 'atr', 'ATR0807G048' => 'atr', 'ATR1091G084' => 'atr', 'Atru.chr10.1229' => 'acertr', 'Atru.chr10.1230' => 'acertr', 'Atru.chr10.1874' => 'acertr', 'Atru.chr11.1808' => 'acertr', 'Atru.chr13.1795' => 'acertr', 'Atru.chr13.570' => 'acertr', 'Atru.chr2.2608' => 'acertr', 'Atru.chr2.2609' => 'acertr', 'Atru.chr5.3428' => 'acertr', 'Atru.chr8.1171' => 'acertr', 'AUR62004651' => 'cqu', 'AUR62008675' => 'cqu', 'AUR62010014' => 'cqu', 'AUR62013004' => 'cqu', 'AUR62014825' => 'cqu', 'AUR62015015' => 'cqu', 'AUR62015151' => 'cqu', 'AUR62017020' => 'cqu', 'AUR62019422' => 'cqu', 'AUR62023570' => 'cqu', 'AUR62025571' => 'cqu', 'AUR62029098' => 'cqu', 'AUR62033863' => 'cqu', 'AUR62034296' => 'cqu', 'AUR62040075' => 'cqu', 'BcaB02g07334' => 'bca', 'BcaB02g10575' => 'bca', 'BcaB03g12119' => 'bca', 'BcaB03g12120' => 'bca', 'BcaB03g13945' => 'bca', 'BcaB04g17123' => 'bca', 'BcaB04g17867' => 'bca', 'BcaB04g19839' => 'bca', 'BcaB07g30317' => 'bca', 'BcaB07g32432' => 'bca', 'BcaB07g33362' => 'bca', 'BcaB08g36611' => 'bca', 'BcaC01g00028' => 'bca', 'BcaC01g01356' => 'bca', 'BcaC01g02034' => 'bca', 'BcaC01g06051' => 'bca', 'BcaC03g16839' => 'bca', 'BcaC03g17176' => 'bca', 'BcaC05g26829' => 'bca', 'BcaC06g31490' => 'bca', 'BcaC06g35344' => 'bca', 'BcaC06g36570' => 'bca', 'BcaC07g37537' => 'bca', 'BcaC08g43491' => 'bca', 'BcaC08g43773' => 'bca', 'BcaNung00234' => 'bca', 'BcaNung01982' => 'bca', 'BcaNung03707' => 'bca', 'BcaNung06454' => 'bca', 'BolC2t10762H' => 'bol', 'BolC2t11191H' => 'bol', 'BolC3t14322H' => 'bol', 'BolC3t19747H' => 'bol', 'BolC3t21425H' => 'bol', 'BolC4t27800H' => 'bol', 'BolC5t31423H' => 'bol', 'BolC6t35951H' => 'bol', 'BolC6t36282H' => 'bol', 'BolC7t40678H' => 'bol', 'BolC7t40679H' => 'bol', 'BolC7t42222H' => 'bol', 'BolC7t43492H' => 'bol', 'BolC7t46785H' => 'bol', 'BolC8t47853H' => 'bol', 'BolC9t56805H' => 'bol', 'BraA02t08000Z' => 'bra', 'BraA02t08341Z' => 'bra', 'BraA03t10936Z' => 'bra', 'BraA03t15657Z' => 'bra', 'BraA04t18100Z' => 'bra', 'BraA05t20523Z' => 'bra', 'BraA06t23353Z' => 'bra', 'BraA06t27473Z' => 'bra', 'BraA06t27769Z' => 'bra', 'BraA07t28928Z' => 'bra', 'BraA08t32236Z' => 'bra', 'BraA08t32841Z' => 'bra', 'BraA08t34524Z' => 'bra', 'BraA09t38742Z' => 'bra', 'BraA09t39295Z' => 'bra', 'C02p47180' => 'bna', 'C02p50990' => 'bna', 'C03p19360' => 'bna', 'C03p74950' => 'bna', 'C03p91000' => 'bna', 'C04p63260' => 'bna', 'C05p27050' => 'bna', 'C06p08750' => 'bna', 'C06p11490' => 'bna', 'C07p02820' => 'bna', 'C07p17180' => 'bna', 'C07p29440' => 'bna', 'C07p63730' => 'bna', 'C09p39260' => 'bna', 'CAN.G1164.34' => 'can', 'CAN.G1164.39' => 'can', 'CAN.G1530.3' => 'can', 'CAN.G162.61' => 'can', 'CAN.G176.6' => 'can', 'CAN.G289.49' => 'can', 'CAN.G370.21' => 'can', 'CAN.G370.22' => 'can', 'CAN.G371.117' => 'can', 'CAN.G58.37' => 'can', 'CAN.G588.98' => 'can', 'CANSAT21G2266' => 'cansat', 'CANSAT25G2799' => 'cansat', 'CANSAT35G0862' => 'cansat', 'CANSAT35G1704' => 'cansat', 'CANSAT35G1760' => 'cansat', 'CANSAT56G3971' => 'cansat', 'CANSAT56G4116' => 'cansat', 'CANSAT80G1259' => 'cansat', 'CARHR027730' => 'chi', 'CARHR033880' => 'chi', 'CARHR043270' => 'chi', 'CARHR145330' => 'chi', 'CARHR145340' => 'chi', 'CARHR175570' => 'chi', 'CARHR181570' => 'chi', 'CARHR258470' => 'chi', 'CARHR260490' => 'chi', 'CARHR294220' => 'chi', 'Carub.0001s2668' => 'cru', 'Carub.0001s3257' => 'cru', 'Carub.0001s4220' => 'cru', 'Carub.0005s0179' => 'cru', 'Carub.0006s2807' => 'cru', 'Carub.0007s0039' => 'cru', 'Carub.0008s0169' => 'cru', 'Carub.0008s0636' => 'cru', 'Ca_00338_v3' => 'car', 'Ca_00542_v3' => 'car', 'Ca_01844_v3' => 'car', 'Ca_10611_v3' => 'car', 'Ca_13326_v3' => 'car', 'Ca_17944_v3' => 'car', 'Ca_18546_v3' => 'car', 'Ca_24219_v3' => 'car', 'Ca_29972_v3' => 'car', 'CBR_g3681' => 'cbr', 'CBR_g40021' => 'cbr', 'Cc01_g08140' => 'ccan', 'Cc02_g13410' => 'ccan', 'Cc02_g37480' => 'ccan', 'Cc05_g12030' => 'ccan', 'Cc09_g03370' => 'ccan', 'Cc09_g10300' => 'ccan', 'Cc10_g03530' => 'ccan', 'Cc10_g11380' => 'ccan', 'CDE01G0176' => 'cde', 'CDE02G0675' => 'cde', 'CDE02G0942' => 'cde', 'CDE02G1153' => 'cde', 'CDE02G4177' => 'cde', 'CDE04G2117' => 'cde', 'CDE04G2736' => 'cde', 'CDE08G1161' => 'cde', 'CDE09G1238' => 'cde', 'Cfa000467' => 'cfa', 'Cfa000947' => 'cfa', 'Cfa004969' => 'cfa', 'Cfa005284' => 'cfa', 'Cfa008993' => 'cfa', 'Cfa018187' => 'cfa', 'Cfa018454' => 'cfa', 'Cfa020585' => 'cfa', 'Ciclev10000424m.g' => 'ccl', 'Ciclev10003605m.g' => 'ccl', 'Ciclev10007828m.g' => 'ccl', 'Ciclev10014620m.g' => 'ccl', 'Ciclev10015169m.g' => 'ccl', 'Ciclev10018291m.g' => 'ccl', 'Ciclev10028256m.g' => 'ccl', 'Ciclev10033822m.g' => 'ccl', 'CiPaw.05G060300' => 'cil', 'CiPaw.05G085000' => 'cil', 'CiPaw.06G083700' => 'cil', 'CiPaw.06G120300' => 'cil', 'CiPaw.09G060500' => 'cil', 'CiPaw.09G123800' => 'cil', 'CiPaw.11G169700' => 'cil', 'CiPaw.12G118300' => 'cil', 'CiPaw.15G071000' => 'cil', 'CiPaw.15G081900' => 'cil', 'ClCG01G024610' => 'cla', 'ClCG03G006070' => 'cla', 'ClCG05G019250' => 'cla', 'ClCG09G009500' => 'cla', 'ClCG11G008200' => 'cla', 'ClCG11G018080' => 'cla', 'COL.COLO4_17373' => 'col', 'COL.COLO4_22994' => 'col', 'COL.COLO4_26389' => 'col', 'COL.COLO4_27170' => 'col', 'COL.COLO4_31074' => 'col', 'COL.COLO4_31465' => 'col', 'COL.COLO4_36438' => 'col', 'COL.COLO4_36439' => 'col', 'Cpa.g.c38781' => 'cpa', 'Cpa.g.sc128.12' => 'cpa', 'Cpa.g.sc166.7' => 'cpa', 'Cpa.g.sc166.8' => 'cpa', 'Cpa.g.sc20.111' => 'cpa', 'Cpa.g.sc27.31' => 'cpa', 'Cpa.g.sc64.36' => 'cpa', 'Cpa.g.sc64.37' => 'cpa', 'Cpa.g.sc66.49' => 'cpa', 'Cpa.g.sc80.64' => 'cpa', 'CsaV3_1G012320' => 'csa', 'CsaV3_2G008480' => 'csa', 'CsaV3_2G033450' => 'csa', 'CsaV3_3G044830' => 'csa', 'CsaV3_4G033710' => 'csa', 'CsaV3_6G051730' => 'csa', 'CsaV3_7G025350' => 'csa', 'CSS0001067' => 'camsi', 'CSS0005996' => 'camsi', 'CSS0006590' => 'camsi', 'CSS0009673' => 'camsi', 'CSS0010201' => 'camsi', 'CSS0010549' => 'camsi', 'CSS0011364' => 'camsi', 'CSS0014473' => 'camsi', 'CSS0014961' => 'camsi', 'CSS0020191' => 'camsi', 'CSS0021165' => 'camsi', 'CSS0022306' => 'camsi', 'CSS0030591' => 'camsi', 'CSS0030696' => 'camsi', 'CSS0032653' => 'camsi', 'CSS0037487' => 'camsi', 'CSS0041102' => 'camsi', 'CSS0041261' => 'camsi', 'CSS0046246' => 'camsi', 'CSS0049256' => 'camsi', 'DCAR_004075' => 'dca', 'DCAR_011538' => 'dca', 'DCAR_019553' => 'dca', 'DCAR_020952' => 'dca', 'DCAR_021739' => 'dca', 'DCAR_027407' => 'dca', 'DCAR_027913' => 'dca', 'DCAR_028066' => 'dca', 'Dinv05899' => 'din', 'Dinv07563' => 'din', 'Dinv08010' => 'din', 'Dinv14125' => 'din', 'Dinv20172' => 'din', 'Dinv30743' => 'din', 'Dinv31229' => 'din', 'Dinv34162' => 'din', 'Dinv36028' => 'din', 'Dinv39368' => 'din', 'Dinv40565' => 'din', 'Dinv41706' => 'din', 'Duzib052G0089' => 'dzi', 'Duzib116G0641' => 'dzi', 'Duzib132G0069' => 'dzi', 'Duzib132G1219' => 'dzi', 'Duzib147G0278' => 'dzi', 'Duzib160G0480' => 'dzi', 'Duzib170G0661' => 'dzi', 'Duzib177G0591' => 'dzi', 'Duzib187G1353' => 'dzi', 'Duzib192G0858' => 'dzi', 'Duzib192G0883' => 'dzi', 'Duzib213G0506' => 'dzi', 'Duzib235G0289' => 'dzi', 'Duzib251G0422' => 'dzi', 'ECA232G3898' => 'eca', 'ECA233G5950' => 'eca', 'ECA234G1699' => 'eca', 'ECA234G2421' => 'eca', 'ECA236G0426' => 'eca', 'ECA236G4331' => 'eca', 'ECA248G2573' => 'eca', 'EL10Ac1g00077' => 'bvu', 'EL10Ac1g01746' => 'bvu', 'EL10Ac2g03464' => 'bvu', 'EL10Ac4g08176' => 'bvu', 'EL10Ac7g17521' => 'bvu', 'EL10Ac8g20386' => 'bvu', 'EL10Ac9g21343' => 'bvu', 'EL10Ac9g22688' => 'bvu', 'Eucgr.B03434' => 'egr', 'Eucgr.D00618' => 'egr', 'Eucgr.E02395' => 'egr', 'Eucgr.F01129' => 'egr', 'Eucgr.F02622' => 'egr', 'Eucgr.F04207' => 'egr', 'FAN01G0570' => 'fan', 'FAN03G3351' => 'fan', 'FAN06G3702' => 'fan', 'FAN07G2149' => 'fan', 'FAN10G3758' => 'fan', 'FAN11G1170' => 'fan', 'FAN11G2050' => 'fan', 'FAN11G2724' => 'fan', 'FAN12G1700' => 'fan', 'FAN12G2028' => 'fan', 'FAN15G1160' => 'fan', 'FAN15G3063' => 'fan', 'FAN16G2540' => 'fan', 'FAN16G3077' => 'fan', 'FAN16G3624' => 'fan', 'FAN17G0221' => 'fan', 'FAN20G2492' => 'fan', 'FAN20G2905' => 'fan', 'FAN21G0548' => 'fan', 'FAN21G1300' => 'fan', 'FAN22G0077' => 'fan', 'FAN22G1315' => 'fan', 'FAN24G1280' => 'fan', 'FAN24G1445' => 'fan', 'FAN24G3527' => 'fan', 'FAN25G0464' => 'fan', 'FAN25G2885' => 'fan', 'FAN25G3270' => 'fan', 'FAN27G1101' => 'fan', 'FAN27G2846' => 'fan', 'FAN27G3524' => 'fan', 'FvH4_2g11770' => 'fve', 'FvH4_2g15630' => 'fve', 'FvH4_3g05570' => 'fve', 'FvH4_3g09110' => 'fve', 'FvH4_3g19940' => 'fve', 'FvH4_4g04821' => 'fve', 'FvH4_4g31480' => 'fve', 'FvH4_7g01740' => 'fve', 'Glyma.05G130400' => 'gma', 'Glyma.05G156400' => 'gma', 'Glyma.07G197000' => 'gma', 'Glyma.08G085151' => 'gma', 'Glyma.08G114500' => 'gma', 'Glyma.08G300400' => 'gma', 'Glyma.10G215800' => 'gma', 'Glyma.12G224400' => 'gma', 'Glyma.13G179300' => 'gma', 'Glyma.13G218151' => 'gma', 'Glyma.13G238800' => 'gma', 'Glyma.13G276900' => 'gma', 'Glyma.14G078200' => 'gma', 'Glyma.15G074500' => 'gma', 'Glyma.15G094100' => 'gma', 'Glyma.17G247200' => 'gma', 'Glyma.18G120100' => 'gma', 'Glyma.20G176000' => 'gma', 'Gohir.A01G063600' => 'ghi', 'Gohir.A01G170301' => 'ghi', 'Gohir.A02G060500' => 'ghi', 'Gohir.A05G133850' => 'ghi', 'Gohir.A05G161400' => 'ghi', 'Gohir.A06G012900' => 'ghi', 'Gohir.A06G035901' => 'ghi', 'Gohir.A06G127100' => 'ghi', 'Gohir.A06G210500' => 'ghi', 'Gohir.A08G008650' => 'ghi', 'Gohir.A09G072700' => 'ghi', 'Gohir.A09G088301' => 'ghi', 'Gohir.A10G040600' => 'ghi', 'Gohir.A12G036300' => 'ghi', 'Gohir.A12G143350' => 'ghi', 'Gohir.A12G165500' => 'ghi', 'Gohir.A13G145700' => 'ghi', 'Gohir.D01G050000' => 'ghi', 'Gohir.D01G051366' => 'ghi', 'Gohir.D01G161350' => 'ghi', 'Gohir.D02G065900' => 'ghi', 'Gohir.D05G164200' => 'ghi', 'Gohir.D05G355500' => 'ghi', 'Gohir.D06G010400' => 'ghi', 'Gohir.D06G111250' => 'ghi', 'Gohir.D06G132000' => 'ghi', 'Gohir.D06G210500' => 'ghi', 'Gohir.D07G165675' => 'ghi', 'Gohir.D08G062240' => 'ghi', 'Gohir.D08G086101' => 'ghi', 'Gohir.D08G138060' => 'ghi', 'Gohir.D09G072300' => 'ghi', 'Gohir.D10G041400' => 'ghi', 'Gohir.D11G191020' => 'ghi', 'Gohir.D11G212066' => 'ghi', 'Gohir.D12G036300' => 'ghi', 'Gohir.D12G168600' => 'ghi', 'Gohir.D13G150600' => 'ghi', 'Gorai.001G057300' => 'gra', 'Gorai.002G069900' => 'gra', 'Gorai.002G200000' => 'gra', 'Gorai.003G067600' => 'gra', 'Gorai.005G074800' => 'gra', 'Gorai.006G087300' => 'gra', 'Gorai.008G037500' => 'gra', 'Gorai.008G181400' => 'gra', 'Gorai.009G169400' => 'gra', 'Gorai.009G387900' => 'gra', 'Gorai.010G013300' => 'gra', 'Gorai.010G153800' => 'gra', 'Gorai.010G255800' => 'gra', 'Gorai.011G043700' => 'gra', 'Gorai.011G198900' => 'gra', 'Gorai.013G168400' => 'gra', 'GSVIVG01005212001' => 'vvi', 'GSVIVG01006163001' => 'vvi', 'GSVIVG01009625001' => 'vvi', 'GSVIVG01014338001' => 'vvi', 'GSVIVG01020005001' => 'vvi', 'GSVIVG01021450001' => 'vvi', 'GSVIVG01023975001' => 'vvi', 'GSVIVG01034490001' => 'vvi', 'HanXRQChr04g0112071' => 'han', 'HanXRQChr05g0131151' => 'han', 'HanXRQChr09g0262371' => 'han', 'HanXRQChr09g0268401' => 'han', 'HanXRQChr10g0279241' => 'han', 'HanXRQChr10g0297961' => 'han', 'HanXRQChr11g0326231' => 'han', 'HanXRQChr11g0328471' => 'han', 'HanXRQChr16g0507941' => 'han', 'HanXRQChr17g0560211' => 'han', 'Haze_02108' => 'cav', 'Haze_02428' => 'cav', 'Haze_05593' => 'cav', 'Haze_06448' => 'cav', 'Haze_09427' => 'cav', 'Haze_12022' => 'cav', 'Haze_17612' => 'cav', 'Haze_17928' => 'cav', 'Hma1.2p1_0032F.1_g019250' => 'hma', 'Hma1.2p1_0163F.1_g072690' => 'hma', 'Hma1.2p1_0265F.1_g106710' => 'hma', 'Hma1.2p1_0286F.1_g113970' => 'hma', 'Hma1.2p1_0363F.1_g136640' => 'hma', 'Hma1.2p1_0584F.1_g183470' => 'hma', 'Hma1.2p1_0885F.1_g232570' => 'hma', 'HPP92_006022' => 'vpl', 'HPP92_007320' => 'vpl', 'HPP92_011521' => 'vpl', 'HPP92_019387' => 'vpl', 'HPP92_024038' => 'vpl', 'Hund05891' => 'sun', 'Hund06450' => 'sun', 'Hund12053' => 'sun', 'Hund16800' => 'sun', 'Hund21222' => 'sun', 'Hund22896' => 'sun', 'Hund23746' => 'sun', 'Hund27083' => 'sun', 'Lalb_Chr02g0141831' => 'lal', 'Lalb_Chr02g0141841' => 'lal', 'Lalb_Chr05g0220411' => 'lal', 'Lalb_Chr06g0162081' => 'lal', 'Lalb_Chr09g0327651' => 'lal', 'Lalb_Chr13g0295051' => 'lal', 'Lalb_Chr15g0086801' => 'lal', 'Lalb_Chr16g0383781' => 'lal', 'Lalb_Chr16g0383791' => 'lal', 'Lalb_Chr18g0055441' => 'lal', 'Lalb_Chr18g0059611' => 'lal', 'Lalb_Chr20g0109661' => 'lal', 'Lalb_Chr20g0109831' => 'lal', 'Lalb_Chr20g0121871' => 'lal', 'Lalb_Chr22g0355361' => 'lal', 'Lalb_Chr25g0286371' => 'lal', 'Lj1A1187G43' => 'lonja', 'Lj1A1205T50' => 'lonja', 'Lj1A800G33' => 'lonja', 'Lj1C1187T7' => 'lonja', 'Lj1C843T11' => 'lonja', 'Lj1g0010940' => 'lja', 'Lj2A288T69' => 'lonja', 'Lj3g0024276' => 'lja', 'Lj4A47T76' => 'lonja', 'Lj4g0005805' => 'lja', 'Lj4g0006097' => 'lja', 'Lj4g0008528' => 'lja', 'Lj4g0024907' => 'lja', 'Lj5g0012472' => 'lja', 'Lj5g0018648' => 'lja', 'Lj6C789G1' => 'lonja', 'Lj6g0004000' => 'lja', 'Lj7A292G67' => 'lonja', 'Lj7A292T64' => 'lonja', 'Lj9A400T58' => 'lonja', 'Lsat_1_v5_gn_1_126181' => 'lsa', 'Lsat_1_v5_gn_4_123041' => 'lsa', 'Lsat_1_v5_gn_4_133620' => 'lsa', 'Lsat_1_v5_gn_4_53221' => 'lsa', 'Lsat_1_v5_gn_4_71961' => 'lsa', 'Lsat_1_v5_gn_7_105241' => 'lsa', 'Lsat_1_v5_gn_7_21361' => 'lsa', 'Lsat_1_v5_gn_7_28860' => 'lsa', 'Lsat_1_v5_gn_7_31260' => 'lsa', 'Lsat_1_v5_gn_8_52801' => 'lsa', 'Manes.02G191400' => 'mes', 'Manes.03G110100' => 'mes', 'Manes.04G071100' => 'mes', 'Manes.05G100500' => 'mes', 'Manes.05G164700' => 'mes', 'Manes.15G087000' => 'mes', 'Manes.15G121500' => 'mes', 'Manes.16G028300' => 'mes', 'Manes.17G046100' => 'mes', 'Manes.17G069800' => 'mes', 'Manes.18G100500' => 'mes', 'Mapoly0002s0109' => 'mpo', 'Mapoly0024s0007' => 'mpo', 'Mapoly0089s0032' => 'mpo', 'MBI04_g42241_MAGBIO' => 'mbi', 'MBI05_g11988_MAGBIO' => 'mbi', 'MBI05_g35452_MAGBIO' => 'mbi', 'MBI07_g30179_MAGBIO' => 'mbi', 'MBI07_g35859_MAGBIO' => 'mbi', 'MBI07_g35860_MAGBIO' => 'mbi', 'MBI07_g37166_MAGBIO' => 'mbi', 'MBI08_g18172_MAGBIO' => 'mbi', 'MBI09_g08441_MAGBIO' => 'mbi', 'MBI13_g01676_MAGBIO' => 'mbi', 'MBI14_g42955_MAGBIO' => 'mbi', 'MBI16_g13161_MAGBIO' => 'mbi', 'MBI17_g27204_MAGBIO' => 'mbi', 'MBI19_g21595_MAGBIO' => 'mbi', 'MD00G1148400' => 'mdo', 'MD02G1301200' => 'mdo', 'MD03G1227800' => 'mdo', 'MD05G1041100' => 'mdo', 'MD05G1124800' => 'mdo', 'MD05G1284000' => 'mdo', 'MD05G1338800' => 'mdo', 'MD05G1338900' => 'mdo', 'MD07G1022800' => 'mdo', 'MD10G1047500' => 'mdo', 'MD10G1127500' => 'mdo', 'MD10G1262300' => 'mdo', 'MD10G1293800' => 'mdo', 'MD16G1074300' => 'mdo', 'Medtr1g021670' => 'mtr', 'Medtr1g096320' => 'mtr', 'Medtr2g013690' => 'mtr', 'Medtr2g019450' => 'mtr', 'Medtr2g085170' => 'mtr', 'Medtr4g088785' => 'mtr', 'Medtr8g055930' => 'mtr', 'Medtr8g085850' => 'mtr', 'MELO3C002605.2' => 'cme', 'MELO3C003891.2' => 'cme', 'MELO3C004012.2' => 'cme', 'MELO3C007134.2' => 'cme', 'MELO3C008118.2' => 'cme', 'MELO3C016700.2' => 'cme', 'MELO3C024127.2' => 'cme', 'MELO3C033361.2' => 'cme', 'MELO3C033362.2' => 'cme', 'Migut.C00430' => 'egut', 'Migut.C01246' => 'egut', 'Migut.E00101' => 'egut', 'Migut.H01486' => 'egut', 'Migut.H01939' => 'egut', 'Migut.K00360' => 'egut', 'Migut.M00910' => 'egut', 'Migut.M01139' => 'egut', 'Migut.N02677' => 'egut', 'MSTRG.13252' => 'ama', 'MSTRG.14701' => 'ama', 'MSTRG.1521' => 'ama', 'MSTRG.15884' => 'ama', 'MSTRG.16242' => 'ama', 'MSTRG.22285' => 'ama', 'MSTRG.22444' => 'ama', 'MSTRG.2349' => 'ama', 'MSTRG.26308' => 'ama', 'MSTRG.28296' => 'ama', 'MSTRG.9895' => 'ama', 'Nitab4.5_0000110g0060' => 'nta', 'Nitab4.5_0000420g0130' => 'nta', 'Nitab4.5_0000422g0030' => 'nta', 'Nitab4.5_0000560g0180' => 'nta', 'Nitab4.5_0000703g0100' => 'nta', 'Nitab4.5_0000786g0200' => 'nta', 'Nitab4.5_0001336g0020' => 'nta', 'Nitab4.5_0001796g0030' => 'nta', 'Nitab4.5_0003348g0060' => 'nta', 'Nitab4.5_0003698g0040' => 'nta', 'Nitab4.5_0003942g0090' => 'nta', 'Nitab4.5_0004775g0070' => 'nta', 'Nitab4.5_0004864g0030' => 'nta', 'Nitab4.5_0005615g0020' => 'nta', 'Nitab4.5_0009288g0030' => 'nta', 'Nitab4.5_0009341g0010' => 'nta', 'Nitab4.5_0009535g0010' => 'nta', 'Nn1g03995' => 'nnu', 'Nn1g04100' => 'nnu', 'Nn1g06530' => 'nnu', 'Nn3g16404' => 'nnu', 'Nn3g17212' => 'nnu', 'Nn3g20776' => 'nnu', 'Nn3g21923' => 'nnu', 'Nn5g27737' => 'nnu', 'Nn5g29461' => 'nnu', 'Nn7g38355' => 'nnu', 'Nn8g39873' => 'nnu', 'Oeu000548.2' => 'oeu', 'Oeu004672.1' => 'oeu', 'Oeu015605.2' => 'oeu', 'Oeu016092.1' => 'oeu', 'Oeu017879.3' => 'oeu', 'Oeu024910.1' => 'oeu', 'Oeu028965.1' => 'oeu', 'Oeu031269.1' => 'oeu', 'Oeu031270.1' => 'oeu', 'Oeu032535.1' => 'oeu', 'Oeu034151.1' => 'oeu', 'Oeu034152.1' => 'oeu', 'Oeu034588.2' => 'oeu', 'Oeu050846.1' => 'oeu', 'Oeu050849.2' => 'oeu', 'Oeu051063.2' => 'oeu', 'Oeu052368.1' => 'oeu', 'Oeu052370.1' => 'oeu', 'Os01g0210400' => 'osa', 'Os01g0304300' => 'osa', 'Os01g0749100' => 'osa', 'Os02g0745800' => 'osa', 'Os03g0769050' => 'osa', 'Os05g0531500' => 'osa', 'Os06g0724300' => 'osa', 'Os11g0198100' => 'osa', 'Peaxi162Scf00069g01425' => 'pax', 'Peaxi162Scf00280g00811' => 'pax', 'Peaxi162Scf00310g00615' => 'pax', 'Peaxi162Scf00362g00542' => 'pax', 'Peaxi162Scf00461g00310' => 'pax', 'Peaxi162Scf00530g00118' => 'pax', 'Peaxi162Scf00541g00057' => 'pax', 'Peaxi162Scf00661g00017' => 'pax', 'Peaxi162Scf00926g00027' => 'pax', 'Peaxi162Scf01064g00263' => 'pax', 'Peaxi162Scf01211g00135' => 'pax', 'PGR004G2336' => 'pgr', 'PGR042G0327' => 'pgr', 'PGR042G1957' => 'pgr', 'PGR042G2003' => 'pgr', 'PGR042G3929' => 'pgr', 'PGR083G1137' => 'pgr', 'PGR083G1364' => 'pgr', 'PGSC0003DMG400003381' => 'stu', 'PGSC0003DMG400003417' => 'stu', 'PGSC0003DMG400008981' => 'stu', 'PGSC0003DMG400012417' => 'stu', 'PGSC0003DMG400012823' => 'stu', 'PGSC0003DMG400016885' => 'stu', 'PGSC0003DMG400022812' => 'stu', 'PGSC0003DMG400029726' => 'stu', 'PGSC0003DMG401009243' => 'stu', 'PGSC0003DMG401031505' => 'stu', 'PGSC0003DMG402031505' => 'stu', 'Phvul.001G017600' => 'pvu', 'Phvul.002G193500' => 'pvu', 'Phvul.002G228900' => 'pvu', 'Phvul.002G236800' => 'pvu', 'Phvul.003G049500' => 'pvu', 'Phvul.005G072000' => 'pvu', 'Phvul.006G164800' => 'pvu', 'Phvul.006G185100' => 'pvu', 'Phvul.007G090000' => 'pvu', 'Potri.001G399800' => 'ptr', 'Potri.002G149900' => 'ptr', 'Potri.004G044100' => 'ptr', 'Potri.004G177600' => 'ptr', 'Potri.009G138000' => 'ptr', 'Potri.010G094000' => 'ptr', 'Potri.011G053000' => 'ptr', 'Potri.011G119300' => 'ptr', 'Potri.013G113700' => 'ptr', 'Potri.018G107800' => 'ptr', 'Potri.019G084100' => 'ptr', 'Pp3c14_23720' => 'ppa', 'Pp3c16_6340' => 'ppa', 'Pp3c23_13420' => 'ppa', 'Pp3c24_2740' => 'ppa', 'Pp3c25_860' => 'ppa', 'Pp3c8_21750' => 'ppa', 'Prupe.1G273000' => 'ppe', 'Prupe.1G273700' => 'ppe', 'Prupe.1G274100' => 'ppe', 'Prupe.2G023300' => 'ppe', 'Prupe.4G048000' => 'ppe', 'Prupe.4G080400' => 'ppe', 'Prupe.4G181200' => 'ppe', 'Prupe.8G056900' => 'ppe', 'Prupe.8G168700' => 'ppe', 'Psat1g189080' => 'psa', 'Psat1g204760' => 'psa', 'Psat4g175560' => 'psa', 'Psat4g177720' => 'psa', 'Psat5g244240' => 'psa', 'Psat6g010720' => 'psa', 'Psat6g187200' => 'psa', 'Psat7g072040' => 'psa', 'PSO017G3501' => 'pso', 'PSO063G2148' => 'pso', 'PSO063G5608' => 'pso', 'PSO210G6392' => 'pso', 'PSO541G2319' => 'pso', 'PSO541G2836' => 'pso', 'PSO541G4012' => 'pso', 'PSO541G6253' => 'pso', 'PSO675G0580' => 'pso', 'PSO675G0856' => 'pso', 'PSO675G5635' => 'pso', 'PSO675G9157' => 'pso', 'PSO832G1660' => 'pso', 'PSO832G1969' => 'pso', 'QL02p007186' => 'qlo', 'QL02p033904' => 'qlo', 'QL03p064391' => 'qlo', 'QL05p040593' => 'qlo', 'QL05p058242' => 'qlo', 'QL08p021825' => 'qlo', 'QL11p004981' => 'qlo', 'RcHm_v2.0_Chr1g0318301' => 'rch', 'RcHm_v2.0_Chr4g0418501' => 'rch', 'RcHm_v2.0_Chr4g0439971' => 'rch', 'RcHm_v2.0_Chr5g0008541' => 'rch', 'RcHm_v2.0_Chr5g0014101' => 'rch', 'RcHm_v2.0_Chr5g0014131' => 'rch', 'RcHm_v2.0_Chr5g0033621' => 'rch', 'RcHm_v2.0_Chr6g0272041' => 'rch', 'RcHm_v2.0_Chr6g0278831' => 'rch', 'Rhsim02G0130400' => 'rsi', 'Rhsim02G0171100' => 'rsi', 'Rhsim05G0053000' => 'rsi', 'Rhsim05G0053100' => 'rsi', 'Rhsim06G0096500' => 'rsi', 'Rhsim06G0096600' => 'rsi', 'Rhsim06G0199100' => 'rsi', 'Rhsim12G0062300' => 'rsi', 'Rhsim12G0062800' => 'rsi', 'Sabra02G0118600' => 'sbr', 'Sabra04G0027300' => 'sbr', 'Sabra04G0119500' => 'sbr', 'Sabra08G0112500' => 'sbr', 'Sabra11G0036800' => 'sbr', 'Sabra11G0103800' => 'sbr', 'Sabra13G0096300' => 'sbr', 'Sabra16G0262300' => 'sbr', 'Sabra18G0091700' => 'sbr', 'Sabra19G0095400' => 'sbr', 'SalBow6G3080' => 'sbo', 'SalBow7G1157' => 'sbo', 'SalBow7G2123' => 'sbo', 'SalBow7G2285' => 'sbo', 'SalBow7G3537' => 'sbo', 'SalBow8G2947' => 'sbo', 'SalBow8G4463' => 'sbo', 'SalBow8G5466' => 'sbo', 'Sc01g0001750' => 'sci', 'Sc02g0006640' => 'sci', 'Sc02g0006670' => 'sci', 'Sc04g0008220' => 'sci', 'Sc05g0006190' => 'sci', 'Sc08g0002760' => 'sci', 'Sc17g0006170' => 'sci', 'Sc22g0002050' => 'sci', 'Sc23g0001190' => 'sci', 'Sc24g0000980' => 'sci', 'Sed0006245' => 'sed', 'Sed0007543' => 'sed', 'Sed0009411' => 'sed', 'Sed0010765' => 'sed', 'Sed0012944' => 'sed', 'Sed0014682' => 'sed', 'Sed0016174' => 'sed', 'Sed0016796' => 'sed', 'Sed0020317' => 'sed', 'Sed0021467' => 'sed', 'SEGI_01316' => 'sgi', 'SEGI_03374' => 'sgi', 'SEGI_16265' => 'sgi', 'SEGI_18569' => 'sgi', 'SEGI_20351' => 'sgi', 'SEGI_26395' => 'sgi', 'SEGI_29469' => 'sgi', 'SEGI_34771' => 'sgi', 'SEGI_36769' => 'sgi', 'SEGI_37139' => 'sgi', 'SGA_v2.0_scaffold100G29687' => 'sas', 'SGA_v2.0_scaffold118G32472' => 'sas', 'SGA_v2.0_scaffold14G07051' => 'sas', 'SGA_v2.0_scaffold183G39845' => 'sas', 'SGA_v2.0_scaffold1G00174' => 'sas', 'SGA_v2.0_scaffold22G09714' => 'sas', 'SGA_v2.0_scaffold333G48992' => 'sas', 'SGA_v2.0_scaffold46G17491' => 'sas', 'SGA_v2.0_scaffold49G18294' => 'sas', 'SGA_v2.0_scaffold63G21658' => 'sas', 'SHI01741' => 'shi', 'SHI05771' => 'shi', 'SHI18077' => 'shi', 'SHI20525' => 'shi', 'SHI20527' => 'shi', 'SHI20528' => 'shi', 'SMO172G0185' => 'smo', 'SMO198G0020' => 'smo', 'SMO351G0006' => 'smo', 'SMO356G0118' => 'smo', 'SMO358G0296' => 'smo', 'SMO367G0079' => 'smo', 'SMO367G1277' => 'smo', 'Solyc01g014220.3' => 'sly', 'Solyc01g111770.2' => 'sly', 'Solyc02g078180.3' => 'sly', 'Solyc03g006430.3' => 'sly', 'Solyc03g006456.1' => 'sly', 'Solyc03g079860.2' => 'sly', 'Solyc04g079770.3' => 'sly', 'Solyc05g007430.4' => 'sly', 'Solyc07g063150.3' => 'sly', 'Solyc08g016620.3' => 'sly', 'Solyc09g057590.3' => 'sly', 'Solyc09g057600.1' => 'sly', 'Solyc10g009050.3' => 'sly', 'Solyc11g017420.2' => 'sly', 'Sopen01g053810' => 'spe', 'Sopen02g023040' => 'spe', 'Sopen03g002440' => 'spe', 'Sopen04g033350' => 'spe', 'Sopen05g003310' => 'spe', 'Sopen07g004050' => 'spe', 'Sopen07g031340' => 'spe', 'Sopen08g006990' => 'spe', 'Sopen10g004830' => 'spe', 'Sopen11g009370' => 'spe', 'Sp1g24450' => 'spa', 'Sp1g29670' => 'spa', 'Sp1g39600' => 'spa', 'Sp2g11080' => 'spa', 'Sp2g13970' => 'spa', 'Sp4g16130' => 'spa', 'Sp6g13080' => 'spa', 'Sp7g37270' => 'spa', 'TAR371G0065' => 'tar', 'TAR376G0340' => 'tar', 'TAR376G0435' => 'tar', 'TAR381G0002' => 'tar', 'TAR381G1236' => 'tar', 'TAR624G0055' => 'tar', 'TAR624G0324' => 'tar', 'TAR624G0696' => 'tar', 'TAR624G0906' => 'tar', 'TAR625G0107' => 'tar', 'TAR626G0015' => 'tar', 'TAR626G1356' => 'tar', 'TAR627G0888' => 'tar', 'TAR628G0399' => 'tar', 'TAR628G1327' => 'tar', 'TAR629G2831' => 'tar', 'TAR629G2874' => 'tar', 'TAR633G1432' => 'tar', 'TAR633G2771' => 'tar', 'THA.LOC104803394' => 'tha', 'THA.LOC104805153' => 'tha', 'THA.LOC104806784' => 'tha', 'THA.LOC104810473' => 'tha', 'THA.LOC104813100' => 'tha', 'THA.LOC104814215' => 'tha', 'THA.LOC104815554' => 'tha', 'THA.LOC104820544' => 'tha', 'THA.LOC104824754' => 'tha', 'THA.LOC104827717' => 'tha', 'Thecc.02G031400' => 'tca', 'Thecc.02G055900' => 'tca', 'Thecc.02G350800' => 'tca', 'Thecc.06G150900' => 'tca', 'Thecc.06G186600' => 'tca', 'Thecc.07G089600' => 'tca', 'Thecc.08G020400' => 'tca', 'Thecc.08G182100' => 'tca', 'Thhalv10000873m.g' => 'esa', 'Thhalv10004185m.g' => 'esa', 'Thhalv10006981m.g' => 'esa', 'Thhalv10007204m.g' => 'esa', 'Thhalv10011374m.g' => 'esa', 'Thhalv10013482m.g' => 'esa', 'Thhalv10017801m.g' => 'esa', 'Thhalv10024983m.g' => 'esa', 'TPR.G12072' => 'tpr', 'TPR.G15769' => 'tpr', 'TPR.G16504' => 'tpr', 'TPR.G16506' => 'tpr', 'TPR.G24345' => 'tpr', 'TPR.G26666' => 'tpr', 'TPR.G27320' => 'tpr', 'TPR.G31819' => 'tpr', 'TPR.G38879' => 'tpr', 'TPR.G39015' => 'tpr', 'TPR.G8819' => 'tpr', 'TWI09G0924' => 'twi', 'TWI12G0811' => 'twi', 'TWI12G1294' => 'twi', 'TWI31G0150' => 'twi', 'TWI36G1262' => 'twi', 'TWI38G1287' => 'twi', 'TWI38G1633' => 'twi', 'TWI38G1982' => 'twi', 'TWI39G0116' => 'twi', 'TWI60G1011' => 'twi', 'TWI63G0171' => 'twi', 'TWI73G0839' => 'twi', 'TWI79G1511' => 'twi', 'unitig_0.g915' => 'ugi', 'unitig_0.g916' => 'ugi', 'unitig_21.g20219' => 'ugi', 'unitig_21.g20416' => 'ugi', 'unitig_578.g16132' => 'ugi', 'unitig_578.g16718' => 'ugi', 'unitig_62.g23481' => 'ugi', 'unitig_744.g24535' => 'ugi', 'unitig_749.g13525' => 'ugi', 'vmacro01248' => 'vma', 'vmacro02290' => 'vma', 'vmacro10946' => 'vma', 'vmacro11865' => 'vma', 'vmacro12493' => 'vma', 'vmacro17322' => 'vma', 'vmacro21599' => 'vma', 'vmacro23041' => 'vma', 'VMungo0251G0004' => 'vmu', 'VMungo0251G2639' => 'vmu', 'VMungo0251G2967' => 'vmu', 'VMungo0540G0864' => 'vmu', 'VMungo0540G1569' => 'vmu', 'VMungo0647G0317' => 'vmu', 'VMungo0720G1373' => 'vmu', 'VMungo0720G1508' => 'vmu', 'VMungo1080G0485' => 'vmu', 'VMungo1215G3177' => 'vmu', 'Zm00001eb112600' => 'zma', 'Zm00001eb120220' => 'zma', 'Zm00001eb153240' => 'zma', 'Zm00001eb168880' => 'zma', 'Zm00001eb213920' => 'zma', 'Zm00001eb228280' => 'zma', 'Zm00001eb254580' => 'zma', 'Zm00001eb272180' => 'zma', 'Zm00001eb293190' => 'zma', 'Zm00001eb322930' => 'zma', 'Zm00001eb353360' => 'zma', 'Zm00001eb353390' => 'zma', 'Zm00001eb353430' => 'zma', 'Zm00001eb353440' => 'zma', 'Zm00001eb353780' => 'zma' ) $gf_id = 'HOM05D000499' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000499' ) $data_identifier = 'HOM05D000499' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 29, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 12, 'amhyb' => (int) 8, 'aly' => (int) 12, 'aox' => (int) 9, 'arhy' => (int) 26, 'ath' => (int) 8, 'atr' => (int) 7, 'acertr' => (int) 10, 'cqu' => (int) 15, 'bca' => (int) 29, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 11, 'cansat' => (int) 8, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 9, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 8, 'cpa' => (int) 10, 'csa' => (int) 7, 'camsi' => (int) 20, 'dca' => (int) 8, 'din' => (int) 12, 'dzi' => (int) 14, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 6, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 38, 'gra' => (int) 16, 'vvi' => (int) 8, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 5, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 11, 'lja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 11, 'mpo' => (int) 3, 'mbi' => (int) 14, 'mdo' => (int) 14, 'mtr' => (int) 8, 'cme' => (int) 9, 'egut' => (int) 9, 'ama' => (int) 11, 'nta' => (int) 17, 'nnu' => (int) 11, 'oeu' => (int) 18, 'osa' => (int) 8, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 6, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 9, 'rsi' => (int) 9, 'sbr' => (int) 10, 'sbo' => (int) 8, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 10, 'sas' => (int) 10, 'shi' => (int) 6, 'smo' => (int) 7, 'sly' => (int) 14, 'spe' => (int) 10, 'spa' => (int) 8, 'tar' => (int) 19, 'tha' => (int) 10, 'tca' => (int) 8, 'esa' => (int) 8, 'tpr' => (int) 11, 'twi' => (int) 13, 'ugi' => (int) 9, 'vma' => (int) 8, 'vmu' => (int) 10, 'zma' => (int) 15 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb353780' $species_info = array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ) $local_species = 'pax' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000499', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1066', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p29780' => 'bna', 'A02p33180' => 'bna', 'A03p16470' => 'bna', 'A03p66010' => 'bna', 'A04p25970' => 'bna', 'A06p01270' => 'bna', 'A06p46080' => 'bna', 'A07p11400' => 'bna', 'A08p01840' => 'bna', 'A08p08230' => 'bna', 'A08p25740' => 'bna', 'A09p32070' => 'bna', 'A09p37830' => 'bna', 'A09p42840' => 'bna', 'A09p42850' => 'bna', 'Aa31LG10G2060' => 'aar', 'Aa31LG2G7410' => 'aar', 'Aa31LG6G10200' => 'aar', 'Aa31LG6G16680' => 'aar', 'Aa31LG6G8470' => 'aar', 'Aa31LG9G12730' => 'aar', 'Aa31LG9G13680' => 'aar', 'Aa31LG9G14920' => 'aar', 'Aa31LG9G6650' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4977' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5467' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3254' => 'aag', 'Actinidia02578' => 'ach', 'Actinidia07693' => 'ach', 'Actinidia08413' => 'ach', 'Actinidia08414' => 'ach', 'Actinidia15289' => 'ach', 'Actinidia19871' => 'ach', 'Actinidia21475' => 'ach', 'Actinidia22576' => 'ach', 'Actinidia28327' => 'ach', 'Actinidia32491' => 'ach', 'Actinidia39463' => 'ach', 'Actinidia39571' => 'ach', 'Ah.01g013750' => 'amhyb', 'Ah.01g023210' => 'amhyb', 'Ah.04g164850' => 'amhyb', 'Ah.05g178060' => 'amhyb', 'Ah.07g204270' => 'amhyb', 'Ah.07g208480' => 'amhyb', 'Ah.09g237410' => 'amhyb', 'Ah.14g089460' => 'amhyb', 'AL1G41790' => 'aly', 'AL1G49050' => 'aly', 'AL1G53810' => 'aly', 'AL1G61400' => 'aly', 'AL4G18580' => 'aly', 'AL5G12510' => 'aly', 'AL5G12540' => 'aly', 'AL6G43230' => 'aly', 'AL7G10370' => 'aly', 'AL7G19250' => 'aly', 'AL8G12240' => 'aly', 'AL8G18540' => 'aly', 'Aqoxy1G02409' => 'aox', 'Aqoxy2G03993' => 'aox', 'Aqoxy3G03357' => 'aox', 'Aqoxy4G00785' => 'aox', 'Aqoxy5G02598' => 'aox', 'Aqoxy6G00132' => 'aox', 'Aqoxy7G01776' => 'aox', 'Aqoxy7G02316' => 'aox', 'Aqoxy7G03973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.12AFKW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B8730' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27IQR1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3F75VG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3RE0GA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41TCQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.527VTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FIR39' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5W8UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DA38EV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ63HS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H1I32C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HC27T5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4M8AP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7N3CZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9UVDZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LS1NQA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT1D4B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SKC4TM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCFV76' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF9Q1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQWD9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1ZM88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WE07RT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YCK7VH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJE6Q6' => 'arhy', 'AT1G28240' => 'ath', 'AT1G34550' => 'ath', 'AT1G53040' => 'ath', 'AT2G02910' => 'ath', 'AT4G09630' => 'ath', 'AT4G38500' => 'ath', 'AT5G42660' => 'ath', 'AT5G46220' => 'ath', 'ATR0152G026' => 'atr', 'ATR0564G343' => 'atr', 'ATR0706G151' => 'atr', 'ATR0733G207' => 'atr', 'ATR0751G234' => 'atr', 'ATR0807G048' => 'atr', 'ATR1091G084' => 'atr', 'Atru.chr10.1229' => 'acertr', 'Atru.chr10.1230' => 'acertr', 'Atru.chr10.1874' => 'acertr', 'Atru.chr11.1808' => 'acertr', 'Atru.chr13.1795' => 'acertr', 'Atru.chr13.570' => 'acertr', 'Atru.chr2.2608' => 'acertr', 'Atru.chr2.2609' => 'acertr', 'Atru.chr5.3428' => 'acertr', 'Atru.chr8.1171' => 'acertr', 'AUR62004651' => 'cqu', 'AUR62008675' => 'cqu', 'AUR62010014' => 'cqu', 'AUR62013004' => 'cqu', 'AUR62014825' => 'cqu', 'AUR62015015' => 'cqu', 'AUR62015151' => 'cqu', 'AUR62017020' => 'cqu', 'AUR62019422' => 'cqu', 'AUR62023570' => 'cqu', 'AUR62025571' => 'cqu', 'AUR62029098' => 'cqu', 'AUR62033863' => 'cqu', 'AUR62034296' => 'cqu', 'AUR62040075' => 'cqu', 'BcaB02g07334' => 'bca', 'BcaB02g10575' => 'bca', 'BcaB03g12119' => 'bca', 'BcaB03g12120' => 'bca', 'BcaB03g13945' => 'bca', 'BcaB04g17123' => 'bca', 'BcaB04g17867' => 'bca', 'BcaB04g19839' => 'bca', 'BcaB07g30317' => 'bca', 'BcaB07g32432' => 'bca', 'BcaB07g33362' => 'bca', 'BcaB08g36611' => 'bca', 'BcaC01g00028' => 'bca', 'BcaC01g01356' => 'bca', 'BcaC01g02034' => 'bca', 'BcaC01g06051' => 'bca', 'BcaC03g16839' => 'bca', 'BcaC03g17176' => 'bca', 'BcaC05g26829' => 'bca', 'BcaC06g31490' => 'bca', 'BcaC06g35344' => 'bca', 'BcaC06g36570' => 'bca', 'BcaC07g37537' => 'bca', 'BcaC08g43491' => 'bca', 'BcaC08g43773' => 'bca', 'BcaNung00234' => 'bca', 'BcaNung01982' => 'bca', 'BcaNung03707' => 'bca', 'BcaNung06454' => 'bca', 'BolC2t10762H' => 'bol', 'BolC2t11191H' => 'bol', 'BolC3t14322H' => 'bol', 'BolC3t19747H' => 'bol', 'BolC3t21425H' => 'bol', 'BolC4t27800H' => 'bol', 'BolC5t31423H' => 'bol', 'BolC6t35951H' => 'bol', 'BolC6t36282H' => 'bol', 'BolC7t40678H' => 'bol', 'BolC7t40679H' => 'bol', 'BolC7t42222H' => 'bol', 'BolC7t43492H' => 'bol', 'BolC7t46785H' => 'bol', 'BolC8t47853H' => 'bol', 'BolC9t56805H' => 'bol', 'BraA02t08000Z' => 'bra', 'BraA02t08341Z' => 'bra', 'BraA03t10936Z' => 'bra', 'BraA03t15657Z' => 'bra', 'BraA04t18100Z' => 'bra', 'BraA05t20523Z' => 'bra', 'BraA06t23353Z' => 'bra', 'BraA06t27473Z' => 'bra', 'BraA06t27769Z' => 'bra', 'BraA07t28928Z' => 'bra', 'BraA08t32236Z' => 'bra', 'BraA08t32841Z' => 'bra', 'BraA08t34524Z' => 'bra', 'BraA09t38742Z' => 'bra', 'BraA09t39295Z' => 'bra', 'C02p47180' => 'bna', 'C02p50990' => 'bna', 'C03p19360' => 'bna', 'C03p74950' => 'bna', 'C03p91000' => 'bna', 'C04p63260' => 'bna', 'C05p27050' => 'bna', 'C06p08750' => 'bna', 'C06p11490' => 'bna', 'C07p02820' => 'bna', 'C07p17180' => 'bna', 'C07p29440' => 'bna', 'C07p63730' => 'bna', 'C09p39260' => 'bna', 'CAN.G1164.34' => 'can', 'CAN.G1164.39' => 'can', 'CAN.G1530.3' => 'can', 'CAN.G162.61' => 'can', 'CAN.G176.6' => 'can', 'CAN.G289.49' => 'can', 'CAN.G370.21' => 'can', 'CAN.G370.22' => 'can', 'CAN.G371.117' => 'can', 'CAN.G58.37' => 'can', 'CAN.G588.98' => 'can', 'CANSAT21G2266' => 'cansat', 'CANSAT25G2799' => 'cansat', 'CANSAT35G0862' => 'cansat', 'CANSAT35G1704' => 'cansat', 'CANSAT35G1760' => 'cansat', 'CANSAT56G3971' => 'cansat', 'CANSAT56G4116' => 'cansat', 'CANSAT80G1259' => 'cansat', 'CARHR027730' => 'chi', 'CARHR033880' => 'chi', 'CARHR043270' => 'chi', 'CARHR145330' => 'chi', 'CARHR145340' => 'chi', 'CARHR175570' => 'chi', 'CARHR181570' => 'chi', 'CARHR258470' => 'chi', 'CARHR260490' => 'chi', 'CARHR294220' => 'chi', 'Carub.0001s2668' => 'cru', 'Carub.0001s3257' => 'cru', 'Carub.0001s4220' => 'cru', 'Carub.0005s0179' => 'cru', 'Carub.0006s2807' => 'cru', 'Carub.0007s0039' => 'cru', 'Carub.0008s0169' => 'cru', 'Carub.0008s0636' => 'cru', 'Ca_00338_v3' => 'car', 'Ca_00542_v3' => 'car', 'Ca_01844_v3' => 'car', 'Ca_10611_v3' => 'car', 'Ca_13326_v3' => 'car', 'Ca_17944_v3' => 'car', 'Ca_18546_v3' => 'car', 'Ca_24219_v3' => 'car', 'Ca_29972_v3' => 'car', 'CBR_g3681' => 'cbr', 'CBR_g40021' => 'cbr', 'Cc01_g08140' => 'ccan', 'Cc02_g13410' => 'ccan', 'Cc02_g37480' => 'ccan', 'Cc05_g12030' => 'ccan', 'Cc09_g03370' => 'ccan', 'Cc09_g10300' => 'ccan', 'Cc10_g03530' => 'ccan', 'Cc10_g11380' => 'ccan', 'CDE01G0176' => 'cde', 'CDE02G0675' => 'cde', 'CDE02G0942' => 'cde', 'CDE02G1153' => 'cde', 'CDE02G4177' => 'cde', 'CDE04G2117' => 'cde', 'CDE04G2736' => 'cde', 'CDE08G1161' => 'cde', 'CDE09G1238' => 'cde', 'Cfa000467' => 'cfa', 'Cfa000947' => 'cfa', 'Cfa004969' => 'cfa', 'Cfa005284' => 'cfa', 'Cfa008993' => 'cfa', 'Cfa018187' => 'cfa', 'Cfa018454' => 'cfa', 'Cfa020585' => 'cfa', 'Ciclev10000424m.g' => 'ccl', 'Ciclev10003605m.g' => 'ccl', 'Ciclev10007828m.g' => 'ccl', 'Ciclev10014620m.g' => 'ccl', 'Ciclev10015169m.g' => 'ccl', 'Ciclev10018291m.g' => 'ccl', 'Ciclev10028256m.g' => 'ccl', 'Ciclev10033822m.g' => 'ccl', 'CiPaw.05G060300' => 'cil', 'CiPaw.05G085000' => 'cil', 'CiPaw.06G083700' => 'cil', 'CiPaw.06G120300' => 'cil', 'CiPaw.09G060500' => 'cil', 'CiPaw.09G123800' => 'cil', 'CiPaw.11G169700' => 'cil', 'CiPaw.12G118300' => 'cil', 'CiPaw.15G071000' => 'cil', 'CiPaw.15G081900' => 'cil', 'ClCG01G024610' => 'cla', 'ClCG03G006070' => 'cla', 'ClCG05G019250' => 'cla', 'ClCG09G009500' => 'cla', 'ClCG11G008200' => 'cla', 'ClCG11G018080' => 'cla', 'COL.COLO4_17373' => 'col', 'COL.COLO4_22994' => 'col', 'COL.COLO4_26389' => 'col', 'COL.COLO4_27170' => 'col', 'COL.COLO4_31074' => 'col', 'COL.COLO4_31465' => 'col', 'COL.COLO4_36438' => 'col', 'COL.COLO4_36439' => 'col', 'Cpa.g.c38781' => 'cpa', 'Cpa.g.sc128.12' => 'cpa', 'Cpa.g.sc166.7' => 'cpa', 'Cpa.g.sc166.8' => 'cpa', 'Cpa.g.sc20.111' => 'cpa', 'Cpa.g.sc27.31' => 'cpa', 'Cpa.g.sc64.36' => 'cpa', 'Cpa.g.sc64.37' => 'cpa', 'Cpa.g.sc66.49' => 'cpa', 'Cpa.g.sc80.64' => 'cpa', 'CsaV3_1G012320' => 'csa', 'CsaV3_2G008480' => 'csa', 'CsaV3_2G033450' => 'csa', 'CsaV3_3G044830' => 'csa', 'CsaV3_4G033710' => 'csa', 'CsaV3_6G051730' => 'csa', 'CsaV3_7G025350' => 'csa', 'CSS0001067' => 'camsi', 'CSS0005996' => 'camsi', 'CSS0006590' => 'camsi', 'CSS0009673' => 'camsi', 'CSS0010201' => 'camsi', 'CSS0010549' => 'camsi', 'CSS0011364' => 'camsi', 'CSS0014473' => 'camsi', 'CSS0014961' => 'camsi', 'CSS0020191' => 'camsi', 'CSS0021165' => 'camsi', 'CSS0022306' => 'camsi', 'CSS0030591' => 'camsi', 'CSS0030696' => 'camsi', 'CSS0032653' => 'camsi', 'CSS0037487' => 'camsi', 'CSS0041102' => 'camsi', 'CSS0041261' => 'camsi', 'CSS0046246' => 'camsi', 'CSS0049256' => 'camsi', 'DCAR_004075' => 'dca', 'DCAR_011538' => 'dca', 'DCAR_019553' => 'dca', 'DCAR_020952' => 'dca', 'DCAR_021739' => 'dca', 'DCAR_027407' => 'dca', 'DCAR_027913' => 'dca', 'DCAR_028066' => 'dca', 'Dinv05899' => 'din', 'Dinv07563' => 'din', 'Dinv08010' => 'din', 'Dinv14125' => 'din', 'Dinv20172' => 'din', 'Dinv30743' => 'din', 'Dinv31229' => 'din', 'Dinv34162' => 'din', 'Dinv36028' => 'din', 'Dinv39368' => 'din', 'Dinv40565' => 'din', 'Dinv41706' => 'din', 'Duzib052G0089' => 'dzi', 'Duzib116G0641' => 'dzi', 'Duzib132G0069' => 'dzi', 'Duzib132G1219' => 'dzi', 'Duzib147G0278' => 'dzi', 'Duzib160G0480' => 'dzi', 'Duzib170G0661' => 'dzi', 'Duzib177G0591' => 'dzi', 'Duzib187G1353' => 'dzi', 'Duzib192G0858' => 'dzi', 'Duzib192G0883' => 'dzi', 'Duzib213G0506' => 'dzi', 'Duzib235G0289' => 'dzi', 'Duzib251G0422' => 'dzi', 'ECA232G3898' => 'eca', 'ECA233G5950' => 'eca', 'ECA234G1699' => 'eca', 'ECA234G2421' => 'eca', 'ECA236G0426' => 'eca', 'ECA236G4331' => 'eca', 'ECA248G2573' => 'eca', 'EL10Ac1g00077' => 'bvu', 'EL10Ac1g01746' => 'bvu', 'EL10Ac2g03464' => 'bvu', 'EL10Ac4g08176' => 'bvu', 'EL10Ac7g17521' => 'bvu', 'EL10Ac8g20386' => 'bvu', 'EL10Ac9g21343' => 'bvu', 'EL10Ac9g22688' => 'bvu', 'Eucgr.B03434' => 'egr', 'Eucgr.D00618' => 'egr', 'Eucgr.E02395' => 'egr', 'Eucgr.F01129' => 'egr', 'Eucgr.F02622' => 'egr', 'Eucgr.F04207' => 'egr', 'FAN01G0570' => 'fan', 'FAN03G3351' => 'fan', 'FAN06G3702' => 'fan', 'FAN07G2149' => 'fan', 'FAN10G3758' => 'fan', 'FAN11G1170' => 'fan', 'FAN11G2050' => 'fan', 'FAN11G2724' => 'fan', 'FAN12G1700' => 'fan', 'FAN12G2028' => 'fan', 'FAN15G1160' => 'fan', 'FAN15G3063' => 'fan', 'FAN16G2540' => 'fan', 'FAN16G3077' => 'fan', 'FAN16G3624' => 'fan', 'FAN17G0221' => 'fan', 'FAN20G2492' => 'fan', 'FAN20G2905' => 'fan', 'FAN21G0548' => 'fan', 'FAN21G1300' => 'fan', 'FAN22G0077' => 'fan', 'FAN22G1315' => 'fan', 'FAN24G1280' => 'fan', 'FAN24G1445' => 'fan', 'FAN24G3527' => 'fan', 'FAN25G0464' => 'fan', 'FAN25G2885' => 'fan', 'FAN25G3270' => 'fan', 'FAN27G1101' => 'fan', 'FAN27G2846' => 'fan', 'FAN27G3524' => 'fan', 'FvH4_2g11770' => 'fve', 'FvH4_2g15630' => 'fve', 'FvH4_3g05570' => 'fve', 'FvH4_3g09110' => 'fve', 'FvH4_3g19940' => 'fve', 'FvH4_4g04821' => 'fve', 'FvH4_4g31480' => 'fve', 'FvH4_7g01740' => 'fve', 'Glyma.05G130400' => 'gma', 'Glyma.05G156400' => 'gma', 'Glyma.07G197000' => 'gma', 'Glyma.08G085151' => 'gma', 'Glyma.08G114500' => 'gma', 'Glyma.08G300400' => 'gma', 'Glyma.10G215800' => 'gma', 'Glyma.12G224400' => 'gma', 'Glyma.13G179300' => 'gma', 'Glyma.13G218151' => 'gma', 'Glyma.13G238800' => 'gma', 'Glyma.13G276900' => 'gma', 'Glyma.14G078200' => 'gma', 'Glyma.15G074500' => 'gma', 'Glyma.15G094100' => 'gma', 'Glyma.17G247200' => 'gma', 'Glyma.18G120100' => 'gma', 'Glyma.20G176000' => 'gma', 'Gohir.A01G063600' => 'ghi', 'Gohir.A01G170301' => 'ghi', 'Gohir.A02G060500' => 'ghi', 'Gohir.A05G133850' => 'ghi', 'Gohir.A05G161400' => 'ghi', 'Gohir.A06G012900' => 'ghi', 'Gohir.A06G035901' => 'ghi', 'Gohir.A06G127100' => 'ghi', 'Gohir.A06G210500' => 'ghi', 'Gohir.A08G008650' => 'ghi', 'Gohir.A09G072700' => 'ghi', 'Gohir.A09G088301' => 'ghi', 'Gohir.A10G040600' => 'ghi', 'Gohir.A12G036300' => 'ghi', 'Gohir.A12G143350' => 'ghi', 'Gohir.A12G165500' => 'ghi', 'Gohir.A13G145700' => 'ghi', 'Gohir.D01G050000' => 'ghi', 'Gohir.D01G051366' => 'ghi', 'Gohir.D01G161350' => 'ghi', 'Gohir.D02G065900' => 'ghi', 'Gohir.D05G164200' => 'ghi', 'Gohir.D05G355500' => 'ghi', 'Gohir.D06G010400' => 'ghi', 'Gohir.D06G111250' => 'ghi', 'Gohir.D06G132000' => 'ghi', 'Gohir.D06G210500' => 'ghi', 'Gohir.D07G165675' => 'ghi', 'Gohir.D08G062240' => 'ghi', 'Gohir.D08G086101' => 'ghi', 'Gohir.D08G138060' => 'ghi', 'Gohir.D09G072300' => 'ghi', 'Gohir.D10G041400' => 'ghi', 'Gohir.D11G191020' => 'ghi', 'Gohir.D11G212066' => 'ghi', 'Gohir.D12G036300' => 'ghi', 'Gohir.D12G168600' => 'ghi', 'Gohir.D13G150600' => 'ghi', 'Gorai.001G057300' => 'gra', 'Gorai.002G069900' => 'gra', 'Gorai.002G200000' => 'gra', 'Gorai.003G067600' => 'gra', 'Gorai.005G074800' => 'gra', 'Gorai.006G087300' => 'gra', 'Gorai.008G037500' => 'gra', 'Gorai.008G181400' => 'gra', 'Gorai.009G169400' => 'gra', 'Gorai.009G387900' => 'gra', 'Gorai.010G013300' => 'gra', 'Gorai.010G153800' => 'gra', 'Gorai.010G255800' => 'gra', 'Gorai.011G043700' => 'gra', 'Gorai.011G198900' => 'gra', 'Gorai.013G168400' => 'gra', 'GSVIVG01005212001' => 'vvi', 'GSVIVG01006163001' => 'vvi', 'GSVIVG01009625001' => 'vvi', 'GSVIVG01014338001' => 'vvi', 'GSVIVG01020005001' => 'vvi', 'GSVIVG01021450001' => 'vvi', 'GSVIVG01023975001' => 'vvi', 'GSVIVG01034490001' => 'vvi', 'HanXRQChr04g0112071' => 'han', 'HanXRQChr05g0131151' => 'han', 'HanXRQChr09g0262371' => 'han', 'HanXRQChr09g0268401' => 'han', 'HanXRQChr10g0279241' => 'han', 'HanXRQChr10g0297961' => 'han', 'HanXRQChr11g0326231' => 'han', 'HanXRQChr11g0328471' => 'han', 'HanXRQChr16g0507941' => 'han', 'HanXRQChr17g0560211' => 'han', 'Haze_02108' => 'cav', 'Haze_02428' => 'cav', 'Haze_05593' => 'cav', 'Haze_06448' => 'cav', 'Haze_09427' => 'cav', 'Haze_12022' => 'cav', 'Haze_17612' => 'cav', 'Haze_17928' => 'cav', 'Hma1.2p1_0032F.1_g019250' => 'hma', 'Hma1.2p1_0163F.1_g072690' => 'hma', 'Hma1.2p1_0265F.1_g106710' => 'hma', 'Hma1.2p1_0286F.1_g113970' => 'hma', 'Hma1.2p1_0363F.1_g136640' => 'hma', 'Hma1.2p1_0584F.1_g183470' => 'hma', 'Hma1.2p1_0885F.1_g232570' => 'hma', 'HPP92_006022' => 'vpl', 'HPP92_007320' => 'vpl', 'HPP92_011521' => 'vpl', 'HPP92_019387' => 'vpl', 'HPP92_024038' => 'vpl', 'Hund05891' => 'sun', 'Hund06450' => 'sun', 'Hund12053' => 'sun', 'Hund16800' => 'sun', 'Hund21222' => 'sun', 'Hund22896' => 'sun', 'Hund23746' => 'sun', 'Hund27083' => 'sun', 'Lalb_Chr02g0141831' => 'lal', 'Lalb_Chr02g0141841' => 'lal', 'Lalb_Chr05g0220411' => 'lal', 'Lalb_Chr06g0162081' => 'lal', 'Lalb_Chr09g0327651' => 'lal', 'Lalb_Chr13g0295051' => 'lal', 'Lalb_Chr15g0086801' => 'lal', 'Lalb_Chr16g0383781' => 'lal', 'Lalb_Chr16g0383791' => 'lal', 'Lalb_Chr18g0055441' => 'lal', 'Lalb_Chr18g0059611' => 'lal', 'Lalb_Chr20g0109661' => 'lal', 'Lalb_Chr20g0109831' => 'lal', 'Lalb_Chr20g0121871' => 'lal', 'Lalb_Chr22g0355361' => 'lal', 'Lalb_Chr25g0286371' => 'lal', 'Lj1A1187G43' => 'lonja', 'Lj1A1205T50' => 'lonja', 'Lj1A800G33' => 'lonja', 'Lj1C1187T7' => 'lonja', 'Lj1C843T11' => 'lonja', 'Lj1g0010940' => 'lja', 'Lj2A288T69' => 'lonja', 'Lj3g0024276' => 'lja', 'Lj4A47T76' => 'lonja', 'Lj4g0005805' => 'lja', 'Lj4g0006097' => 'lja', 'Lj4g0008528' => 'lja', 'Lj4g0024907' => 'lja', 'Lj5g0012472' => 'lja', 'Lj5g0018648' => 'lja', 'Lj6C789G1' => 'lonja', 'Lj6g0004000' => 'lja', 'Lj7A292G67' => 'lonja', 'Lj7A292T64' => 'lonja', 'Lj9A400T58' => 'lonja', 'Lsat_1_v5_gn_1_126181' => 'lsa', 'Lsat_1_v5_gn_4_123041' => 'lsa', 'Lsat_1_v5_gn_4_133620' => 'lsa', 'Lsat_1_v5_gn_4_53221' => 'lsa', 'Lsat_1_v5_gn_4_71961' => 'lsa', 'Lsat_1_v5_gn_7_105241' => 'lsa', 'Lsat_1_v5_gn_7_21361' => 'lsa', 'Lsat_1_v5_gn_7_28860' => 'lsa', 'Lsat_1_v5_gn_7_31260' => 'lsa', 'Lsat_1_v5_gn_8_52801' => 'lsa', 'Manes.02G191400' => 'mes', 'Manes.03G110100' => 'mes', 'Manes.04G071100' => 'mes', 'Manes.05G100500' => 'mes', 'Manes.05G164700' => 'mes', 'Manes.15G087000' => 'mes', 'Manes.15G121500' => 'mes', 'Manes.16G028300' => 'mes', 'Manes.17G046100' => 'mes', 'Manes.17G069800' => 'mes', 'Manes.18G100500' => 'mes', 'Mapoly0002s0109' => 'mpo', 'Mapoly0024s0007' => 'mpo', 'Mapoly0089s0032' => 'mpo', 'MBI04_g42241_MAGBIO' => 'mbi', 'MBI05_g11988_MAGBIO' => 'mbi', 'MBI05_g35452_MAGBIO' => 'mbi', 'MBI07_g30179_MAGBIO' => 'mbi', 'MBI07_g35859_MAGBIO' => 'mbi', 'MBI07_g35860_MAGBIO' => 'mbi', 'MBI07_g37166_MAGBIO' => 'mbi', 'MBI08_g18172_MAGBIO' => 'mbi', 'MBI09_g08441_MAGBIO' => 'mbi', 'MBI13_g01676_MAGBIO' => 'mbi', 'MBI14_g42955_MAGBIO' => 'mbi', 'MBI16_g13161_MAGBIO' => 'mbi', 'MBI17_g27204_MAGBIO' => 'mbi', 'MBI19_g21595_MAGBIO' => 'mbi', 'MD00G1148400' => 'mdo', 'MD02G1301200' => 'mdo', 'MD03G1227800' => 'mdo', 'MD05G1041100' => 'mdo', 'MD05G1124800' => 'mdo', 'MD05G1284000' => 'mdo', 'MD05G1338800' => 'mdo', 'MD05G1338900' => 'mdo', 'MD07G1022800' => 'mdo', 'MD10G1047500' => 'mdo', 'MD10G1127500' => 'mdo', 'MD10G1262300' => 'mdo', 'MD10G1293800' => 'mdo', 'MD16G1074300' => 'mdo', 'Medtr1g021670' => 'mtr', 'Medtr1g096320' => 'mtr', 'Medtr2g013690' => 'mtr', 'Medtr2g019450' => 'mtr', 'Medtr2g085170' => 'mtr', 'Medtr4g088785' => 'mtr', 'Medtr8g055930' => 'mtr', 'Medtr8g085850' => 'mtr', 'MELO3C002605.2' => 'cme', 'MELO3C003891.2' => 'cme', 'MELO3C004012.2' => 'cme', 'MELO3C007134.2' => 'cme', 'MELO3C008118.2' => 'cme', 'MELO3C016700.2' => 'cme', 'MELO3C024127.2' => 'cme', 'MELO3C033361.2' => 'cme', 'MELO3C033362.2' => 'cme', 'Migut.C00430' => 'egut', 'Migut.C01246' => 'egut', 'Migut.E00101' => 'egut', 'Migut.H01486' => 'egut', 'Migut.H01939' => 'egut', 'Migut.K00360' => 'egut', 'Migut.M00910' => 'egut', 'Migut.M01139' => 'egut', 'Migut.N02677' => 'egut', 'MSTRG.13252' => 'ama', 'MSTRG.14701' => 'ama', 'MSTRG.1521' => 'ama', 'MSTRG.15884' => 'ama', 'MSTRG.16242' => 'ama', 'MSTRG.22285' => 'ama', 'MSTRG.22444' => 'ama', 'MSTRG.2349' => 'ama', 'MSTRG.26308' => 'ama', 'MSTRG.28296' => 'ama', 'MSTRG.9895' => 'ama', 'Nitab4.5_0000110g0060' => 'nta', 'Nitab4.5_0000420g0130' => 'nta', 'Nitab4.5_0000422g0030' => 'nta', 'Nitab4.5_0000560g0180' => 'nta', 'Nitab4.5_0000703g0100' => 'nta', 'Nitab4.5_0000786g0200' => 'nta', 'Nitab4.5_0001336g0020' => 'nta', 'Nitab4.5_0001796g0030' => 'nta', 'Nitab4.5_0003348g0060' => 'nta', 'Nitab4.5_0003698g0040' => 'nta', 'Nitab4.5_0003942g0090' => 'nta', 'Nitab4.5_0004775g0070' => 'nta', 'Nitab4.5_0004864g0030' => 'nta', 'Nitab4.5_0005615g0020' => 'nta', 'Nitab4.5_0009288g0030' => 'nta', 'Nitab4.5_0009341g0010' => 'nta', 'Nitab4.5_0009535g0010' => 'nta', 'Nn1g03995' => 'nnu', 'Nn1g04100' => 'nnu', 'Nn1g06530' => 'nnu', 'Nn3g16404' => 'nnu', 'Nn3g17212' => 'nnu', 'Nn3g20776' => 'nnu', 'Nn3g21923' => 'nnu', 'Nn5g27737' => 'nnu', 'Nn5g29461' => 'nnu', 'Nn7g38355' => 'nnu', 'Nn8g39873' => 'nnu', 'Oeu000548.2' => 'oeu', 'Oeu004672.1' => 'oeu', 'Oeu015605.2' => 'oeu', 'Oeu016092.1' => 'oeu', 'Oeu017879.3' => 'oeu', 'Oeu024910.1' => 'oeu', 'Oeu028965.1' => 'oeu', 'Oeu031269.1' => 'oeu', 'Oeu031270.1' => 'oeu', 'Oeu032535.1' => 'oeu', 'Oeu034151.1' => 'oeu', 'Oeu034152.1' => 'oeu', 'Oeu034588.2' => 'oeu', 'Oeu050846.1' => 'oeu', 'Oeu050849.2' => 'oeu', 'Oeu051063.2' => 'oeu', 'Oeu052368.1' => 'oeu', 'Oeu052370.1' => 'oeu', 'Os01g0210400' => 'osa', 'Os01g0304300' => 'osa', 'Os01g0749100' => 'osa', 'Os02g0745800' => 'osa', 'Os03g0769050' => 'osa', 'Os05g0531500' => 'osa', 'Os06g0724300' => 'osa', 'Os11g0198100' => 'osa', 'Peaxi162Scf00069g01425' => 'pax', 'Peaxi162Scf00280g00811' => 'pax', 'Peaxi162Scf00310g00615' => 'pax', 'Peaxi162Scf00362g00542' => 'pax', 'Peaxi162Scf00461g00310' => 'pax', 'Peaxi162Scf00530g00118' => 'pax', 'Peaxi162Scf00541g00057' => 'pax', 'Peaxi162Scf00661g00017' => 'pax', 'Peaxi162Scf00926g00027' => 'pax', 'Peaxi162Scf01064g00263' => 'pax', 'Peaxi162Scf01211g00135' => 'pax', 'PGR004G2336' => 'pgr', 'PGR042G0327' => 'pgr', 'PGR042G1957' => 'pgr', 'PGR042G2003' => 'pgr', 'PGR042G3929' => 'pgr', 'PGR083G1137' => 'pgr', 'PGR083G1364' => 'pgr', 'PGSC0003DMG400003381' => 'stu', 'PGSC0003DMG400003417' => 'stu', 'PGSC0003DMG400008981' => 'stu', 'PGSC0003DMG400012417' => 'stu', 'PGSC0003DMG400012823' => 'stu', 'PGSC0003DMG400016885' => 'stu', 'PGSC0003DMG400022812' => 'stu', 'PGSC0003DMG400029726' => 'stu', 'PGSC0003DMG401009243' => 'stu', 'PGSC0003DMG401031505' => 'stu', 'PGSC0003DMG402031505' => 'stu', 'Phvul.001G017600' => 'pvu', 'Phvul.002G193500' => 'pvu', 'Phvul.002G228900' => 'pvu', 'Phvul.002G236800' => 'pvu', 'Phvul.003G049500' => 'pvu', 'Phvul.005G072000' => 'pvu', 'Phvul.006G164800' => 'pvu', 'Phvul.006G185100' => 'pvu', 'Phvul.007G090000' => 'pvu', 'Potri.001G399800' => 'ptr', 'Potri.002G149900' => 'ptr', 'Potri.004G044100' => 'ptr', 'Potri.004G177600' => 'ptr', 'Potri.009G138000' => 'ptr', 'Potri.010G094000' => 'ptr', 'Potri.011G053000' => 'ptr', 'Potri.011G119300' => 'ptr', 'Potri.013G113700' => 'ptr', 'Potri.018G107800' => 'ptr', 'Potri.019G084100' => 'ptr', 'Pp3c14_23720' => 'ppa', 'Pp3c16_6340' => 'ppa', 'Pp3c23_13420' => 'ppa', 'Pp3c24_2740' => 'ppa', 'Pp3c25_860' => 'ppa', 'Pp3c8_21750' => 'ppa', 'Prupe.1G273000' => 'ppe', 'Prupe.1G273700' => 'ppe', 'Prupe.1G274100' => 'ppe', 'Prupe.2G023300' => 'ppe', 'Prupe.4G048000' => 'ppe', 'Prupe.4G080400' => 'ppe', 'Prupe.4G181200' => 'ppe', 'Prupe.8G056900' => 'ppe', 'Prupe.8G168700' => 'ppe', 'Psat1g189080' => 'psa', 'Psat1g204760' => 'psa', 'Psat4g175560' => 'psa', 'Psat4g177720' => 'psa', 'Psat5g244240' => 'psa', 'Psat6g010720' => 'psa', 'Psat6g187200' => 'psa', 'Psat7g072040' => 'psa', 'PSO017G3501' => 'pso', 'PSO063G2148' => 'pso', 'PSO063G5608' => 'pso', 'PSO210G6392' => 'pso', 'PSO541G2319' => 'pso', 'PSO541G2836' => 'pso', 'PSO541G4012' => 'pso', 'PSO541G6253' => 'pso', 'PSO675G0580' => 'pso', 'PSO675G0856' => 'pso', 'PSO675G5635' => 'pso', 'PSO675G9157' => 'pso', 'PSO832G1660' => 'pso', 'PSO832G1969' => 'pso', 'QL02p007186' => 'qlo', 'QL02p033904' => 'qlo', 'QL03p064391' => 'qlo', 'QL05p040593' => 'qlo', 'QL05p058242' => 'qlo', 'QL08p021825' => 'qlo', 'QL11p004981' => 'qlo', 'RcHm_v2.0_Chr1g0318301' => 'rch', 'RcHm_v2.0_Chr4g0418501' => 'rch', 'RcHm_v2.0_Chr4g0439971' => 'rch', 'RcHm_v2.0_Chr5g0008541' => 'rch', 'RcHm_v2.0_Chr5g0014101' => 'rch', 'RcHm_v2.0_Chr5g0014131' => 'rch', 'RcHm_v2.0_Chr5g0033621' => 'rch', 'RcHm_v2.0_Chr6g0272041' => 'rch', 'RcHm_v2.0_Chr6g0278831' => 'rch', 'Rhsim02G0130400' => 'rsi', 'Rhsim02G0171100' => 'rsi', 'Rhsim05G0053000' => 'rsi', 'Rhsim05G0053100' => 'rsi', 'Rhsim06G0096500' => 'rsi', 'Rhsim06G0096600' => 'rsi', 'Rhsim06G0199100' => 'rsi', 'Rhsim12G0062300' => 'rsi', 'Rhsim12G0062800' => 'rsi', 'Sabra02G0118600' => 'sbr', 'Sabra04G0027300' => 'sbr', 'Sabra04G0119500' => 'sbr', 'Sabra08G0112500' => 'sbr', 'Sabra11G0036800' => 'sbr', 'Sabra11G0103800' => 'sbr', 'Sabra13G0096300' => 'sbr', 'Sabra16G0262300' => 'sbr', 'Sabra18G0091700' => 'sbr', 'Sabra19G0095400' => 'sbr', 'SalBow6G3080' => 'sbo', 'SalBow7G1157' => 'sbo', 'SalBow7G2123' => 'sbo', 'SalBow7G2285' => 'sbo', 'SalBow7G3537' => 'sbo', 'SalBow8G2947' => 'sbo', 'SalBow8G4463' => 'sbo', 'SalBow8G5466' => 'sbo', 'Sc01g0001750' => 'sci', 'Sc02g0006640' => 'sci', 'Sc02g0006670' => 'sci', 'Sc04g0008220' => 'sci', 'Sc05g0006190' => 'sci', 'Sc08g0002760' => 'sci', 'Sc17g0006170' => 'sci', 'Sc22g0002050' => 'sci', 'Sc23g0001190' => 'sci', 'Sc24g0000980' => 'sci', 'Sed0006245' => 'sed', 'Sed0007543' => 'sed', 'Sed0009411' => 'sed', 'Sed0010765' => 'sed', 'Sed0012944' => 'sed', 'Sed0014682' => 'sed', 'Sed0016174' => 'sed', 'Sed0016796' => 'sed', 'Sed0020317' => 'sed', 'Sed0021467' => 'sed', 'SEGI_01316' => 'sgi', 'SEGI_03374' => 'sgi', 'SEGI_16265' => 'sgi', 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'Solyc03g079860.2' => 'sly', 'Solyc04g079770.3' => 'sly', 'Solyc05g007430.4' => 'sly', 'Solyc07g063150.3' => 'sly', 'Solyc08g016620.3' => 'sly', 'Solyc09g057590.3' => 'sly', 'Solyc09g057600.1' => 'sly', 'Solyc10g009050.3' => 'sly', 'Solyc11g017420.2' => 'sly', 'Sopen01g053810' => 'spe', 'Sopen02g023040' => 'spe', 'Sopen03g002440' => 'spe', 'Sopen04g033350' => 'spe', 'Sopen05g003310' => 'spe', 'Sopen07g004050' => 'spe', 'Sopen07g031340' => 'spe', 'Sopen08g006990' => 'spe', 'Sopen10g004830' => 'spe', 'Sopen11g009370' => 'spe', 'Sp1g24450' => 'spa', 'Sp1g29670' => 'spa', 'Sp1g39600' => 'spa', 'Sp2g11080' => 'spa', 'Sp2g13970' => 'spa', 'Sp4g16130' => 'spa', 'Sp6g13080' => 'spa', 'Sp7g37270' => 'spa', 'TAR371G0065' => 'tar', 'TAR376G0340' => 'tar', 'TAR376G0435' => 'tar', 'TAR381G0002' => 'tar', 'TAR381G1236' => 'tar', 'TAR624G0055' => 'tar', 'TAR624G0324' => 'tar', 'TAR624G0696' => 'tar', 'TAR624G0906' => 'tar', 'TAR625G0107' => 'tar', 'TAR626G0015' => 'tar', 'TAR626G1356' => 'tar', 'TAR627G0888' => 'tar', 'TAR628G0399' => 'tar', 'TAR628G1327' => 'tar', 'TAR629G2831' => 'tar', 'TAR629G2874' => 'tar', 'TAR633G1432' => 'tar', 'TAR633G2771' => 'tar', 'THA.LOC104803394' => 'tha', 'THA.LOC104805153' => 'tha', 'THA.LOC104806784' => 'tha', 'THA.LOC104810473' => 'tha', 'THA.LOC104813100' => 'tha', 'THA.LOC104814215' => 'tha', 'THA.LOC104815554' => 'tha', 'THA.LOC104820544' => 'tha', 'THA.LOC104824754' => 'tha', 'THA.LOC104827717' => 'tha', 'Thecc.02G031400' => 'tca', 'Thecc.02G055900' => 'tca', 'Thecc.02G350800' => 'tca', 'Thecc.06G150900' => 'tca', 'Thecc.06G186600' => 'tca', 'Thecc.07G089600' => 'tca', 'Thecc.08G020400' => 'tca', 'Thecc.08G182100' => 'tca', 'Thhalv10000873m.g' => 'esa', 'Thhalv10004185m.g' => 'esa', 'Thhalv10006981m.g' => 'esa', 'Thhalv10007204m.g' => 'esa', 'Thhalv10011374m.g' => 'esa', 'Thhalv10013482m.g' => 'esa', 'Thhalv10017801m.g' => 'esa', 'Thhalv10024983m.g' => 'esa', 'TPR.G12072' => 'tpr', 'TPR.G15769' => 'tpr', 'TPR.G16504' => 'tpr', 'TPR.G16506' => 'tpr', 'TPR.G24345' => 'tpr', 'TPR.G26666' => 'tpr', 'TPR.G27320' => 'tpr', 'TPR.G31819' => 'tpr', 'TPR.G38879' => 'tpr', 'TPR.G39015' => 'tpr', 'TPR.G8819' => 'tpr', 'TWI09G0924' => 'twi', 'TWI12G0811' => 'twi', 'TWI12G1294' => 'twi', 'TWI31G0150' => 'twi', 'TWI36G1262' => 'twi', 'TWI38G1287' => 'twi', 'TWI38G1633' => 'twi', 'TWI38G1982' => 'twi', 'TWI39G0116' => 'twi', 'TWI60G1011' => 'twi', 'TWI63G0171' => 'twi', 'TWI73G0839' => 'twi', 'TWI79G1511' => 'twi', 'unitig_0.g915' => 'ugi', 'unitig_0.g916' => 'ugi', 'unitig_21.g20219' => 'ugi', 'unitig_21.g20416' => 'ugi', 'unitig_578.g16132' => 'ugi', 'unitig_578.g16718' => 'ugi', 'unitig_62.g23481' => 'ugi', 'unitig_744.g24535' => 'ugi', 'unitig_749.g13525' => 'ugi', 'vmacro01248' => 'vma', 'vmacro02290' => 'vma', 'vmacro10946' => 'vma', 'vmacro11865' => 'vma', 'vmacro12493' => 'vma', 'vmacro17322' => 'vma', 'vmacro21599' => 'vma', 'vmacro23041' => 'vma', 'VMungo0251G0004' => 'vmu', 'VMungo0251G2639' => 'vmu', 'VMungo0251G2967' => 'vmu', 'VMungo0540G0864' => 'vmu', 'VMungo0540G1569' => 'vmu', 'VMungo0647G0317' => 'vmu', 'VMungo0720G1373' => 'vmu', 'VMungo0720G1508' => 'vmu', 'VMungo1080G0485' => 'vmu', 'VMungo1215G3177' => 'vmu', 'Zm00001eb112600' => 'zma', 'Zm00001eb120220' => 'zma', 'Zm00001eb153240' => 'zma', 'Zm00001eb168880' => 'zma', 'Zm00001eb213920' => 'zma', 'Zm00001eb228280' => 'zma', 'Zm00001eb254580' => 'zma', 'Zm00001eb272180' => 'zma', 'Zm00001eb293190' => 'zma', 'Zm00001eb322930' => 'zma', 'Zm00001eb353360' => 'zma', 'Zm00001eb353390' => 'zma', 'Zm00001eb353430' => 'zma', 'Zm00001eb353440' => 'zma', 'Zm00001eb353780' => 'zma' ), 'gf_id' => 'HOM05D000499', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000499' ), 'data_identifier' => 'HOM05D000499', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000499', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1066', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p29780' => 'bna', 'A02p33180' => 'bna', 'A03p16470' => 'bna', 'A03p66010' => 'bna', 'A04p25970' => 'bna', 'A06p01270' => 'bna', 'A06p46080' => 'bna', 'A07p11400' => 'bna', 'A08p01840' => 'bna', 'A08p08230' => 'bna', 'A08p25740' => 'bna', 'A09p32070' => 'bna', 'A09p37830' => 'bna', 'A09p42840' => 'bna', 'A09p42850' => 'bna', 'Aa31LG10G2060' => 'aar', 'Aa31LG2G7410' => 'aar', 'Aa31LG6G10200' => 'aar', 'Aa31LG6G16680' => 'aar', 'Aa31LG6G8470' => 'aar', 'Aa31LG9G12730' => 'aar', 'Aa31LG9G13680' => 'aar', 'Aa31LG9G14920' => 'aar', 'Aa31LG9G6650' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4977' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5467' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3254' => 'aag', 'Actinidia02578' => 'ach', 'Actinidia07693' => 'ach', 'Actinidia08413' => 'ach', 'Actinidia08414' => 'ach', 'Actinidia15289' => 'ach', 'Actinidia19871' => 'ach', 'Actinidia21475' => 'ach', 'Actinidia22576' => 'ach', 'Actinidia28327' => 'ach', 'Actinidia32491' => 'ach', 'Actinidia39463' => 'ach', 'Actinidia39571' => 'ach', 'Ah.01g013750' => 'amhyb', 'Ah.01g023210' => 'amhyb', 'Ah.04g164850' => 'amhyb', 'Ah.05g178060' => 'amhyb', 'Ah.07g204270' => 'amhyb', 'Ah.07g208480' => 'amhyb', 'Ah.09g237410' => 'amhyb', 'Ah.14g089460' => 'amhyb', 'AL1G41790' => 'aly', 'AL1G49050' => 'aly', 'AL1G53810' => 'aly', 'AL1G61400' => 'aly', 'AL4G18580' => 'aly', 'AL5G12510' => 'aly', 'AL5G12540' => 'aly', 'AL6G43230' => 'aly', 'AL7G10370' => 'aly', 'AL7G19250' => 'aly', 'AL8G12240' => 'aly', 'AL8G18540' => 'aly', 'Aqoxy1G02409' => 'aox', 'Aqoxy2G03993' => 'aox', 'Aqoxy3G03357' => 'aox', 'Aqoxy4G00785' => 'aox', 'Aqoxy5G02598' => 'aox', 'Aqoxy6G00132' => 'aox', 'Aqoxy7G01776' => 'aox', 'Aqoxy7G02316' => 'aox', 'Aqoxy7G03973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.12AFKW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B8730' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27IQR1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3F75VG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3RE0GA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41TCQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.527VTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FIR39' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5W8UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DA38EV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ63HS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H1I32C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HC27T5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4M8AP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7N3CZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9UVDZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LS1NQA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT1D4B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SKC4TM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCFV76' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF9Q1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQWD9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1ZM88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WE07RT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YCK7VH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJE6Q6' => 'arhy', 'AT1G28240' => 'ath', 'AT1G34550' => 'ath', 'AT1G53040' => 'ath', 'AT2G02910' => 'ath', 'AT4G09630' => 'ath', 'AT4G38500' => 'ath', 'AT5G42660' => 'ath', 'AT5G46220' => 'ath', 'ATR0152G026' => 'atr', 'ATR0564G343' => 'atr', 'ATR0706G151' => 'atr', 'ATR0733G207' => 'atr', 'ATR0751G234' => 'atr', 'ATR0807G048' => 'atr', 'ATR1091G084' => 'atr', 'Atru.chr10.1229' => 'acertr', 'Atru.chr10.1230' => 'acertr', 'Atru.chr10.1874' => 'acertr', 'Atru.chr11.1808' => 'acertr', 'Atru.chr13.1795' => 'acertr', 'Atru.chr13.570' => 'acertr', 'Atru.chr2.2608' => 'acertr', 'Atru.chr2.2609' => 'acertr', 'Atru.chr5.3428' => 'acertr', 'Atru.chr8.1171' => 'acertr', 'AUR62004651' => 'cqu', 'AUR62008675' => 'cqu', 'AUR62010014' => 'cqu', 'AUR62013004' => 'cqu', 'AUR62014825' => 'cqu', 'AUR62015015' => 'cqu', 'AUR62015151' => 'cqu', 'AUR62017020' => 'cqu', 'AUR62019422' => 'cqu', 'AUR62023570' => 'cqu', 'AUR62025571' => 'cqu', 'AUR62029098' => 'cqu', 'AUR62033863' => 'cqu', 'AUR62034296' => 'cqu', 'AUR62040075' => 'cqu', 'BcaB02g07334' => 'bca', 'BcaB02g10575' => 'bca', 'BcaB03g12119' => 'bca', 'BcaB03g12120' => 'bca', 'BcaB03g13945' => 'bca', 'BcaB04g17123' => 'bca', 'BcaB04g17867' => 'bca', 'BcaB04g19839' => 'bca', 'BcaB07g30317' => 'bca', 'BcaB07g32432' => 'bca', 'BcaB07g33362' => 'bca', 'BcaB08g36611' => 'bca', 'BcaC01g00028' => 'bca', 'BcaC01g01356' => 'bca', 'BcaC01g02034' => 'bca', 'BcaC01g06051' => 'bca', 'BcaC03g16839' => 'bca', 'BcaC03g17176' => 'bca', 'BcaC05g26829' => 'bca', 'BcaC06g31490' => 'bca', 'BcaC06g35344' => 'bca', 'BcaC06g36570' => 'bca', 'BcaC07g37537' => 'bca', 'BcaC08g43491' => 'bca', 'BcaC08g43773' => 'bca', 'BcaNung00234' => 'bca', 'BcaNung01982' => 'bca', 'BcaNung03707' => 'bca', 'BcaNung06454' => 'bca', 'BolC2t10762H' => 'bol', 'BolC2t11191H' => 'bol', 'BolC3t14322H' => 'bol', 'BolC3t19747H' => 'bol', 'BolC3t21425H' => 'bol', 'BolC4t27800H' => 'bol', 'BolC5t31423H' => 'bol', 'BolC6t35951H' => 'bol', 'BolC6t36282H' => 'bol', 'BolC7t40678H' => 'bol', 'BolC7t40679H' => 'bol', 'BolC7t42222H' => 'bol', 'BolC7t43492H' => 'bol', 'BolC7t46785H' => 'bol', 'BolC8t47853H' => 'bol', 'BolC9t56805H' => 'bol', 'BraA02t08000Z' => 'bra', 'BraA02t08341Z' => 'bra', 'BraA03t10936Z' => 'bra', 'BraA03t15657Z' => 'bra', 'BraA04t18100Z' => 'bra', 'BraA05t20523Z' => 'bra', 'BraA06t23353Z' => 'bra', 'BraA06t27473Z' => 'bra', 'BraA06t27769Z' => 'bra', 'BraA07t28928Z' => 'bra', 'BraA08t32236Z' => 'bra', 'BraA08t32841Z' => 'bra', 'BraA08t34524Z' => 'bra', 'BraA09t38742Z' => 'bra', 'BraA09t39295Z' => 'bra', 'C02p47180' => 'bna', 'C02p50990' => 'bna', 'C03p19360' => 'bna', 'C03p74950' => 'bna', 'C03p91000' => 'bna', 'C04p63260' => 'bna', 'C05p27050' => 'bna', 'C06p08750' => 'bna', 'C06p11490' => 'bna', 'C07p02820' => 'bna', 'C07p17180' => 'bna', 'C07p29440' => 'bna', 'C07p63730' => 'bna', 'C09p39260' => 'bna', 'CAN.G1164.34' => 'can', 'CAN.G1164.39' => 'can', 'CAN.G1530.3' => 'can', 'CAN.G162.61' => 'can', 'CAN.G176.6' => 'can', 'CAN.G289.49' => 'can', 'CAN.G370.21' => 'can', 'CAN.G370.22' => 'can', 'CAN.G371.117' => 'can', 'CAN.G58.37' => 'can', 'CAN.G588.98' => 'can', 'CANSAT21G2266' => 'cansat', 'CANSAT25G2799' => 'cansat', 'CANSAT35G0862' => 'cansat', 'CANSAT35G1704' => 'cansat', 'CANSAT35G1760' => 'cansat', 'CANSAT56G3971' => 'cansat', 'CANSAT56G4116' => 'cansat', 'CANSAT80G1259' => 'cansat', 'CARHR027730' => 'chi', 'CARHR033880' => 'chi', 'CARHR043270' => 'chi', 'CARHR145330' => 'chi', 'CARHR145340' => 'chi', 'CARHR175570' => 'chi', 'CARHR181570' => 'chi', 'CARHR258470' => 'chi', 'CARHR260490' => 'chi', 'CARHR294220' => 'chi', 'Carub.0001s2668' => 'cru', 'Carub.0001s3257' => 'cru', 'Carub.0001s4220' => 'cru', 'Carub.0005s0179' => 'cru', 'Carub.0006s2807' => 'cru', 'Carub.0007s0039' => 'cru', 'Carub.0008s0169' => 'cru', 'Carub.0008s0636' => 'cru', 'Ca_00338_v3' => 'car', 'Ca_00542_v3' => 'car', 'Ca_01844_v3' => 'car', 'Ca_10611_v3' => 'car', 'Ca_13326_v3' => 'car', 'Ca_17944_v3' => 'car', 'Ca_18546_v3' => 'car', 'Ca_24219_v3' => 'car', 'Ca_29972_v3' => 'car', 'CBR_g3681' => 'cbr', 'CBR_g40021' => 'cbr', 'Cc01_g08140' => 'ccan', 'Cc02_g13410' => 'ccan', 'Cc02_g37480' => 'ccan', 'Cc05_g12030' => 'ccan', 'Cc09_g03370' => 'ccan', 'Cc09_g10300' => 'ccan', 'Cc10_g03530' => 'ccan', 'Cc10_g11380' => 'ccan', 'CDE01G0176' => 'cde', 'CDE02G0675' => 'cde', 'CDE02G0942' => 'cde', 'CDE02G1153' => 'cde', 'CDE02G4177' => 'cde', 'CDE04G2117' => 'cde', 'CDE04G2736' => 'cde', 'CDE08G1161' => 'cde', 'CDE09G1238' => 'cde', 'Cfa000467' => 'cfa', 'Cfa000947' => 'cfa', 'Cfa004969' => 'cfa', 'Cfa005284' => 'cfa', 'Cfa008993' => 'cfa', 'Cfa018187' => 'cfa', 'Cfa018454' => 'cfa', 'Cfa020585' => 'cfa', 'Ciclev10000424m.g' => 'ccl', 'Ciclev10003605m.g' => 'ccl', 'Ciclev10007828m.g' => 'ccl', 'Ciclev10014620m.g' => 'ccl', 'Ciclev10015169m.g' => 'ccl', 'Ciclev10018291m.g' => 'ccl', 'Ciclev10028256m.g' => 'ccl', 'Ciclev10033822m.g' => 'ccl', 'CiPaw.05G060300' => 'cil', 'CiPaw.05G085000' => 'cil', 'CiPaw.06G083700' => 'cil', 'CiPaw.06G120300' => 'cil', 'CiPaw.09G060500' => 'cil', 'CiPaw.09G123800' => 'cil', 'CiPaw.11G169700' => 'cil', 'CiPaw.12G118300' => 'cil', 'CiPaw.15G071000' => 'cil', 'CiPaw.15G081900' => 'cil', 'ClCG01G024610' => 'cla', 'ClCG03G006070' => 'cla', 'ClCG05G019250' => 'cla', 'ClCG09G009500' => 'cla', 'ClCG11G008200' => 'cla', 'ClCG11G018080' => 'cla', 'COL.COLO4_17373' => 'col', 'COL.COLO4_22994' => 'col', 'COL.COLO4_26389' => 'col', 'COL.COLO4_27170' => 'col', 'COL.COLO4_31074' => 'col', 'COL.COLO4_31465' => 'col', 'COL.COLO4_36438' => 'col', 'COL.COLO4_36439' => 'col', 'Cpa.g.c38781' => 'cpa', 'Cpa.g.sc128.12' => 'cpa', 'Cpa.g.sc166.7' => 'cpa', 'Cpa.g.sc166.8' => 'cpa', 'Cpa.g.sc20.111' => 'cpa', 'Cpa.g.sc27.31' => 'cpa', 'Cpa.g.sc64.36' => 'cpa', 'Cpa.g.sc64.37' => 'cpa', 'Cpa.g.sc66.49' => 'cpa', 'Cpa.g.sc80.64' => 'cpa', 'CsaV3_1G012320' => 'csa', 'CsaV3_2G008480' => 'csa', 'CsaV3_2G033450' => 'csa', 'CsaV3_3G044830' => 'csa', 'CsaV3_4G033710' => 'csa', 'CsaV3_6G051730' => 'csa', 'CsaV3_7G025350' => 'csa', 'CSS0001067' => 'camsi', 'CSS0005996' => 'camsi', 'CSS0006590' => 'camsi', 'CSS0009673' => 'camsi', 'CSS0010201' => 'camsi', 'CSS0010549' => 'camsi', 'CSS0011364' => 'camsi', 'CSS0014473' => 'camsi', 'CSS0014961' => 'camsi', 'CSS0020191' => 'camsi', 'CSS0021165' => 'camsi', 'CSS0022306' => 'camsi', 'CSS0030591' => 'camsi', 'CSS0030696' => 'camsi', 'CSS0032653' => 'camsi', 'CSS0037487' => 'camsi', 'CSS0041102' => 'camsi', 'CSS0041261' => 'camsi', 'CSS0046246' => 'camsi', 'CSS0049256' => 'camsi', 'DCAR_004075' => 'dca', 'DCAR_011538' => 'dca', 'DCAR_019553' => 'dca', 'DCAR_020952' => 'dca', 'DCAR_021739' => 'dca', 'DCAR_027407' => 'dca', 'DCAR_027913' => 'dca', 'DCAR_028066' => 'dca', 'Dinv05899' => 'din', 'Dinv07563' => 'din', 'Dinv08010' => 'din', 'Dinv14125' => 'din', 'Dinv20172' => 'din', 'Dinv30743' => 'din', 'Dinv31229' => 'din', 'Dinv34162' => 'din', 'Dinv36028' => 'din', 'Dinv39368' => 'din', 'Dinv40565' => 'din', 'Dinv41706' => 'din', 'Duzib052G0089' => 'dzi', 'Duzib116G0641' => 'dzi', 'Duzib132G0069' => 'dzi', 'Duzib132G1219' => 'dzi', 'Duzib147G0278' => 'dzi', 'Duzib160G0480' => 'dzi', 'Duzib170G0661' => 'dzi', 'Duzib177G0591' => 'dzi', 'Duzib187G1353' => 'dzi', 'Duzib192G0858' => 'dzi', 'Duzib192G0883' => 'dzi', 'Duzib213G0506' => 'dzi', 'Duzib235G0289' => 'dzi', 'Duzib251G0422' => 'dzi', 'ECA232G3898' => 'eca', 'ECA233G5950' => 'eca', 'ECA234G1699' => 'eca', 'ECA234G2421' => 'eca', 'ECA236G0426' => 'eca', 'ECA236G4331' => 'eca', 'ECA248G2573' => 'eca', 'EL10Ac1g00077' => 'bvu', 'EL10Ac1g01746' => 'bvu', 'EL10Ac2g03464' => 'bvu', 'EL10Ac4g08176' => 'bvu', 'EL10Ac7g17521' => 'bvu', 'EL10Ac8g20386' => 'bvu', 'EL10Ac9g21343' => 'bvu', 'EL10Ac9g22688' => 'bvu', 'Eucgr.B03434' => 'egr', 'Eucgr.D00618' => 'egr', 'Eucgr.E02395' => 'egr', 'Eucgr.F01129' => 'egr', 'Eucgr.F02622' => 'egr', 'Eucgr.F04207' => 'egr', 'FAN01G0570' => 'fan', 'FAN03G3351' => 'fan', 'FAN06G3702' => 'fan', 'FAN07G2149' => 'fan', 'FAN10G3758' => 'fan', 'FAN11G1170' => 'fan', 'FAN11G2050' => 'fan', 'FAN11G2724' => 'fan', 'FAN12G1700' => 'fan', 'FAN12G2028' => 'fan', 'FAN15G1160' => 'fan', 'FAN15G3063' => 'fan', 'FAN16G2540' => 'fan', 'FAN16G3077' => 'fan', 'FAN16G3624' => 'fan', 'FAN17G0221' => 'fan', 'FAN20G2492' => 'fan', 'FAN20G2905' => 'fan', 'FAN21G0548' => 'fan', 'FAN21G1300' => 'fan', 'FAN22G0077' => 'fan', 'FAN22G1315' => 'fan', 'FAN24G1280' => 'fan', 'FAN24G1445' => 'fan', 'FAN24G3527' => 'fan', 'FAN25G0464' => 'fan', 'FAN25G2885' => 'fan', 'FAN25G3270' => 'fan', 'FAN27G1101' => 'fan', 'FAN27G2846' => 'fan', 'FAN27G3524' => 'fan', 'FvH4_2g11770' => 'fve', 'FvH4_2g15630' => 'fve', 'FvH4_3g05570' => 'fve', 'FvH4_3g09110' => 'fve', 'FvH4_3g19940' => 'fve', 'FvH4_4g04821' => 'fve', 'FvH4_4g31480' => 'fve', 'FvH4_7g01740' => 'fve', 'Glyma.05G130400' => 'gma', 'Glyma.05G156400' => 'gma', 'Glyma.07G197000' => 'gma', 'Glyma.08G085151' => 'gma', 'Glyma.08G114500' => 'gma', 'Glyma.08G300400' => 'gma', 'Glyma.10G215800' => 'gma', 'Glyma.12G224400' => 'gma', 'Glyma.13G179300' => 'gma', 'Glyma.13G218151' => 'gma', 'Glyma.13G238800' => 'gma', 'Glyma.13G276900' => 'gma', 'Glyma.14G078200' => 'gma', 'Glyma.15G074500' => 'gma', 'Glyma.15G094100' => 'gma', 'Glyma.17G247200' => 'gma', 'Glyma.18G120100' => 'gma', 'Glyma.20G176000' => 'gma', 'Gohir.A01G063600' => 'ghi', 'Gohir.A01G170301' => 'ghi', 'Gohir.A02G060500' => 'ghi', 'Gohir.A05G133850' => 'ghi', 'Gohir.A05G161400' => 'ghi', 'Gohir.A06G012900' => 'ghi', 'Gohir.A06G035901' => 'ghi', 'Gohir.A06G127100' => 'ghi', 'Gohir.A06G210500' => 'ghi', 'Gohir.A08G008650' => 'ghi', 'Gohir.A09G072700' => 'ghi', 'Gohir.A09G088301' => 'ghi', 'Gohir.A10G040600' => 'ghi', 'Gohir.A12G036300' => 'ghi', 'Gohir.A12G143350' => 'ghi', 'Gohir.A12G165500' => 'ghi', 'Gohir.A13G145700' => 'ghi', 'Gohir.D01G050000' => 'ghi', 'Gohir.D01G051366' => 'ghi', 'Gohir.D01G161350' => 'ghi', 'Gohir.D02G065900' => 'ghi', 'Gohir.D05G164200' => 'ghi', 'Gohir.D05G355500' => 'ghi', 'Gohir.D06G010400' => 'ghi', 'Gohir.D06G111250' => 'ghi', 'Gohir.D06G132000' => 'ghi', 'Gohir.D06G210500' => 'ghi', 'Gohir.D07G165675' => 'ghi', 'Gohir.D08G062240' => 'ghi', 'Gohir.D08G086101' => 'ghi', 'Gohir.D08G138060' => 'ghi', 'Gohir.D09G072300' => 'ghi', 'Gohir.D10G041400' => 'ghi', 'Gohir.D11G191020' => 'ghi', 'Gohir.D11G212066' => 'ghi', 'Gohir.D12G036300' => 'ghi', 'Gohir.D12G168600' => 'ghi', 'Gohir.D13G150600' => 'ghi', 'Gorai.001G057300' => 'gra', 'Gorai.002G069900' => 'gra', 'Gorai.002G200000' => 'gra', 'Gorai.003G067600' => 'gra', 'Gorai.005G074800' => 'gra', 'Gorai.006G087300' => 'gra', 'Gorai.008G037500' => 'gra', 'Gorai.008G181400' => 'gra', 'Gorai.009G169400' => 'gra', 'Gorai.009G387900' => 'gra', 'Gorai.010G013300' => 'gra', 'Gorai.010G153800' => 'gra', 'Gorai.010G255800' => 'gra', 'Gorai.011G043700' => 'gra', 'Gorai.011G198900' => 'gra', 'Gorai.013G168400' => 'gra', 'GSVIVG01005212001' => 'vvi', 'GSVIVG01006163001' => 'vvi', 'GSVIVG01009625001' => 'vvi', 'GSVIVG01014338001' => 'vvi', 'GSVIVG01020005001' => 'vvi', 'GSVIVG01021450001' => 'vvi', 'GSVIVG01023975001' => 'vvi', 'GSVIVG01034490001' => 'vvi', 'HanXRQChr04g0112071' => 'han', 'HanXRQChr05g0131151' => 'han', 'HanXRQChr09g0262371' => 'han', 'HanXRQChr09g0268401' => 'han', 'HanXRQChr10g0279241' => 'han', 'HanXRQChr10g0297961' => 'han', 'HanXRQChr11g0326231' => 'han', 'HanXRQChr11g0328471' => 'han', 'HanXRQChr16g0507941' => 'han', 'HanXRQChr17g0560211' => 'han', 'Haze_02108' => 'cav', 'Haze_02428' => 'cav', 'Haze_05593' => 'cav', 'Haze_06448' => 'cav', 'Haze_09427' => 'cav', 'Haze_12022' => 'cav', 'Haze_17612' => 'cav', 'Haze_17928' => 'cav', 'Hma1.2p1_0032F.1_g019250' => 'hma', 'Hma1.2p1_0163F.1_g072690' => 'hma', 'Hma1.2p1_0265F.1_g106710' => 'hma', 'Hma1.2p1_0286F.1_g113970' => 'hma', 'Hma1.2p1_0363F.1_g136640' => 'hma', 'Hma1.2p1_0584F.1_g183470' => 'hma', 'Hma1.2p1_0885F.1_g232570' => 'hma', 'HPP92_006022' => 'vpl', 'HPP92_007320' => 'vpl', 'HPP92_011521' => 'vpl', 'HPP92_019387' => 'vpl', 'HPP92_024038' => 'vpl', 'Hund05891' => 'sun', 'Hund06450' => 'sun', 'Hund12053' => 'sun', 'Hund16800' => 'sun', 'Hund21222' => 'sun', 'Hund22896' => 'sun', 'Hund23746' => 'sun', 'Hund27083' => 'sun', 'Lalb_Chr02g0141831' => 'lal', 'Lalb_Chr02g0141841' => 'lal', 'Lalb_Chr05g0220411' => 'lal', 'Lalb_Chr06g0162081' => 'lal', 'Lalb_Chr09g0327651' => 'lal', 'Lalb_Chr13g0295051' => 'lal', 'Lalb_Chr15g0086801' => 'lal', 'Lalb_Chr16g0383781' => 'lal', 'Lalb_Chr16g0383791' => 'lal', 'Lalb_Chr18g0055441' => 'lal', 'Lalb_Chr18g0059611' => 'lal', 'Lalb_Chr20g0109661' => 'lal', 'Lalb_Chr20g0109831' => 'lal', 'Lalb_Chr20g0121871' => 'lal', 'Lalb_Chr22g0355361' => 'lal', 'Lalb_Chr25g0286371' => 'lal', 'Lj1A1187G43' => 'lonja', 'Lj1A1205T50' => 'lonja', 'Lj1A800G33' => 'lonja', 'Lj1C1187T7' => 'lonja', 'Lj1C843T11' => 'lonja', 'Lj1g0010940' => 'lja', 'Lj2A288T69' => 'lonja', 'Lj3g0024276' => 'lja', 'Lj4A47T76' => 'lonja', 'Lj4g0005805' => 'lja', 'Lj4g0006097' => 'lja', 'Lj4g0008528' => 'lja', 'Lj4g0024907' => 'lja', 'Lj5g0012472' => 'lja', 'Lj5g0018648' => 'lja', 'Lj6C789G1' => 'lonja', 'Lj6g0004000' => 'lja', 'Lj7A292G67' => 'lonja', 'Lj7A292T64' => 'lonja', 'Lj9A400T58' => 'lonja', 'Lsat_1_v5_gn_1_126181' => 'lsa', 'Lsat_1_v5_gn_4_123041' => 'lsa', 'Lsat_1_v5_gn_4_133620' => 'lsa', 'Lsat_1_v5_gn_4_53221' => 'lsa', 'Lsat_1_v5_gn_4_71961' => 'lsa', 'Lsat_1_v5_gn_7_105241' => 'lsa', 'Lsat_1_v5_gn_7_21361' => 'lsa', 'Lsat_1_v5_gn_7_28860' => 'lsa', 'Lsat_1_v5_gn_7_31260' => 'lsa', 'Lsat_1_v5_gn_8_52801' => 'lsa', 'Manes.02G191400' => 'mes', 'Manes.03G110100' => 'mes', 'Manes.04G071100' => 'mes', 'Manes.05G100500' => 'mes', 'Manes.05G164700' => 'mes', 'Manes.15G087000' => 'mes', 'Manes.15G121500' => 'mes', 'Manes.16G028300' => 'mes', 'Manes.17G046100' => 'mes', 'Manes.17G069800' => 'mes', 'Manes.18G100500' => 'mes', 'Mapoly0002s0109' => 'mpo', 'Mapoly0024s0007' => 'mpo', 'Mapoly0089s0032' => 'mpo', 'MBI04_g42241_MAGBIO' => 'mbi', 'MBI05_g11988_MAGBIO' => 'mbi', 'MBI05_g35452_MAGBIO' => 'mbi', 'MBI07_g30179_MAGBIO' => 'mbi', 'MBI07_g35859_MAGBIO' => 'mbi', 'MBI07_g35860_MAGBIO' => 'mbi', 'MBI07_g37166_MAGBIO' => 'mbi', 'MBI08_g18172_MAGBIO' => 'mbi', 'MBI09_g08441_MAGBIO' => 'mbi', 'MBI13_g01676_MAGBIO' => 'mbi', 'MBI14_g42955_MAGBIO' => 'mbi', 'MBI16_g13161_MAGBIO' => 'mbi', 'MBI17_g27204_MAGBIO' => 'mbi', 'MBI19_g21595_MAGBIO' => 'mbi', 'MD00G1148400' => 'mdo', 'MD02G1301200' => 'mdo', 'MD03G1227800' => 'mdo', 'MD05G1041100' => 'mdo', 'MD05G1124800' => 'mdo', 'MD05G1284000' => 'mdo', 'MD05G1338800' => 'mdo', 'MD05G1338900' => 'mdo', 'MD07G1022800' => 'mdo', 'MD10G1047500' => 'mdo', 'MD10G1127500' => 'mdo', 'MD10G1262300' => 'mdo', 'MD10G1293800' => 'mdo', 'MD16G1074300' => 'mdo', 'Medtr1g021670' => 'mtr', 'Medtr1g096320' => 'mtr', 'Medtr2g013690' => 'mtr', 'Medtr2g019450' => 'mtr', 'Medtr2g085170' => 'mtr', 'Medtr4g088785' => 'mtr', 'Medtr8g055930' => 'mtr', 'Medtr8g085850' => 'mtr', 'MELO3C002605.2' => 'cme', 'MELO3C003891.2' => 'cme', 'MELO3C004012.2' => 'cme', 'MELO3C007134.2' => 'cme', 'MELO3C008118.2' => 'cme', 'MELO3C016700.2' => 'cme', 'MELO3C024127.2' => 'cme', 'MELO3C033361.2' => 'cme', 'MELO3C033362.2' => 'cme', 'Migut.C00430' => 'egut', 'Migut.C01246' => 'egut', 'Migut.E00101' => 'egut', 'Migut.H01486' => 'egut', 'Migut.H01939' => 'egut', 'Migut.K00360' => 'egut', 'Migut.M00910' => 'egut', 'Migut.M01139' => 'egut', 'Migut.N02677' => 'egut', 'MSTRG.13252' => 'ama', 'MSTRG.14701' => 'ama', 'MSTRG.1521' => 'ama', 'MSTRG.15884' => 'ama', 'MSTRG.16242' => 'ama', 'MSTRG.22285' => 'ama', 'MSTRG.22444' => 'ama', 'MSTRG.2349' => 'ama', 'MSTRG.26308' => 'ama', 'MSTRG.28296' => 'ama', 'MSTRG.9895' => 'ama', 'Nitab4.5_0000110g0060' => 'nta', 'Nitab4.5_0000420g0130' => 'nta', 'Nitab4.5_0000422g0030' => 'nta', 'Nitab4.5_0000560g0180' => 'nta', 'Nitab4.5_0000703g0100' => 'nta', 'Nitab4.5_0000786g0200' => 'nta', 'Nitab4.5_0001336g0020' => 'nta', 'Nitab4.5_0001796g0030' => 'nta', 'Nitab4.5_0003348g0060' => 'nta', 'Nitab4.5_0003698g0040' => 'nta', 'Nitab4.5_0003942g0090' => 'nta', 'Nitab4.5_0004775g0070' => 'nta', 'Nitab4.5_0004864g0030' => 'nta', 'Nitab4.5_0005615g0020' => 'nta', 'Nitab4.5_0009288g0030' => 'nta', 'Nitab4.5_0009341g0010' => 'nta', 'Nitab4.5_0009535g0010' => 'nta', 'Nn1g03995' => 'nnu', 'Nn1g04100' => 'nnu', 'Nn1g06530' => 'nnu', 'Nn3g16404' => 'nnu', 'Nn3g17212' => 'nnu', 'Nn3g20776' => 'nnu', 'Nn3g21923' => 'nnu', 'Nn5g27737' => 'nnu', 'Nn5g29461' => 'nnu', 'Nn7g38355' => 'nnu', 'Nn8g39873' => 'nnu', 'Oeu000548.2' => 'oeu', 'Oeu004672.1' => 'oeu', 'Oeu015605.2' => 'oeu', 'Oeu016092.1' => 'oeu', 'Oeu017879.3' => 'oeu', 'Oeu024910.1' => 'oeu', 'Oeu028965.1' => 'oeu', 'Oeu031269.1' => 'oeu', 'Oeu031270.1' => 'oeu', 'Oeu032535.1' => 'oeu', 'Oeu034151.1' => 'oeu', 'Oeu034152.1' => 'oeu', 'Oeu034588.2' => 'oeu', 'Oeu050846.1' => 'oeu', 'Oeu050849.2' => 'oeu', 'Oeu051063.2' => 'oeu', 'Oeu052368.1' => 'oeu', 'Oeu052370.1' => 'oeu', 'Os01g0210400' => 'osa', 'Os01g0304300' => 'osa', 'Os01g0749100' => 'osa', 'Os02g0745800' => 'osa', 'Os03g0769050' => 'osa', 'Os05g0531500' => 'osa', 'Os06g0724300' => 'osa', 'Os11g0198100' => 'osa', 'Peaxi162Scf00069g01425' => 'pax', 'Peaxi162Scf00280g00811' => 'pax', 'Peaxi162Scf00310g00615' => 'pax', 'Peaxi162Scf00362g00542' => 'pax', 'Peaxi162Scf00461g00310' => 'pax', 'Peaxi162Scf00530g00118' => 'pax', 'Peaxi162Scf00541g00057' => 'pax', 'Peaxi162Scf00661g00017' => 'pax', 'Peaxi162Scf00926g00027' => 'pax', 'Peaxi162Scf01064g00263' => 'pax', 'Peaxi162Scf01211g00135' => 'pax', 'PGR004G2336' => 'pgr', 'PGR042G0327' => 'pgr', 'PGR042G1957' => 'pgr', 'PGR042G2003' => 'pgr', 'PGR042G3929' => 'pgr', 'PGR083G1137' => 'pgr', 'PGR083G1364' => 'pgr', 'PGSC0003DMG400003381' => 'stu', 'PGSC0003DMG400003417' => 'stu', 'PGSC0003DMG400008981' => 'stu', 'PGSC0003DMG400012417' => 'stu', 'PGSC0003DMG400012823' => 'stu', 'PGSC0003DMG400016885' => 'stu', 'PGSC0003DMG400022812' => 'stu', 'PGSC0003DMG400029726' => 'stu', 'PGSC0003DMG401009243' => 'stu', 'PGSC0003DMG401031505' => 'stu', 'PGSC0003DMG402031505' => 'stu', 'Phvul.001G017600' => 'pvu', 'Phvul.002G193500' => 'pvu', 'Phvul.002G228900' => 'pvu', 'Phvul.002G236800' => 'pvu', 'Phvul.003G049500' => 'pvu', 'Phvul.005G072000' => 'pvu', 'Phvul.006G164800' => 'pvu', 'Phvul.006G185100' => 'pvu', 'Phvul.007G090000' => 'pvu', 'Potri.001G399800' => 'ptr', 'Potri.002G149900' => 'ptr', 'Potri.004G044100' => 'ptr', 'Potri.004G177600' => 'ptr', 'Potri.009G138000' => 'ptr', 'Potri.010G094000' => 'ptr', 'Potri.011G053000' => 'ptr', 'Potri.011G119300' => 'ptr', 'Potri.013G113700' => 'ptr', 'Potri.018G107800' => 'ptr', 'Potri.019G084100' => 'ptr', 'Pp3c14_23720' => 'ppa', 'Pp3c16_6340' => 'ppa', 'Pp3c23_13420' => 'ppa', 'Pp3c24_2740' => 'ppa', 'Pp3c25_860' => 'ppa', 'Pp3c8_21750' => 'ppa', 'Prupe.1G273000' => 'ppe', 'Prupe.1G273700' => 'ppe', 'Prupe.1G274100' => 'ppe', 'Prupe.2G023300' => 'ppe', 'Prupe.4G048000' => 'ppe', 'Prupe.4G080400' => 'ppe', 'Prupe.4G181200' => 'ppe', 'Prupe.8G056900' => 'ppe', 'Prupe.8G168700' => 'ppe', 'Psat1g189080' => 'psa', 'Psat1g204760' => 'psa', 'Psat4g175560' => 'psa', 'Psat4g177720' => 'psa', 'Psat5g244240' => 'psa', 'Psat6g010720' => 'psa', 'Psat6g187200' => 'psa', 'Psat7g072040' => 'psa', 'PSO017G3501' => 'pso', 'PSO063G2148' => 'pso', 'PSO063G5608' => 'pso', 'PSO210G6392' => 'pso', 'PSO541G2319' => 'pso', 'PSO541G2836' => 'pso', 'PSO541G4012' => 'pso', 'PSO541G6253' => 'pso', 'PSO675G0580' => 'pso', 'PSO675G0856' => 'pso', 'PSO675G5635' => 'pso', 'PSO675G9157' => 'pso', 'PSO832G1660' => 'pso', 'PSO832G1969' => 'pso', 'QL02p007186' => 'qlo', 'QL02p033904' => 'qlo', 'QL03p064391' => 'qlo', 'QL05p040593' => 'qlo', 'QL05p058242' => 'qlo', 'QL08p021825' => 'qlo', 'QL11p004981' => 'qlo', 'RcHm_v2.0_Chr1g0318301' => 'rch', 'RcHm_v2.0_Chr4g0418501' => 'rch', 'RcHm_v2.0_Chr4g0439971' => 'rch', 'RcHm_v2.0_Chr5g0008541' => 'rch', 'RcHm_v2.0_Chr5g0014101' => 'rch', 'RcHm_v2.0_Chr5g0014131' => 'rch', 'RcHm_v2.0_Chr5g0033621' => 'rch', 'RcHm_v2.0_Chr6g0272041' => 'rch', 'RcHm_v2.0_Chr6g0278831' => 'rch', 'Rhsim02G0130400' => 'rsi', 'Rhsim02G0171100' => 'rsi', 'Rhsim05G0053000' => 'rsi', 'Rhsim05G0053100' => 'rsi', 'Rhsim06G0096500' => 'rsi', 'Rhsim06G0096600' => 'rsi', 'Rhsim06G0199100' => 'rsi', 'Rhsim12G0062300' => 'rsi', 'Rhsim12G0062800' => 'rsi', 'Sabra02G0118600' => 'sbr', 'Sabra04G0027300' => 'sbr', 'Sabra04G0119500' => 'sbr', 'Sabra08G0112500' => 'sbr', 'Sabra11G0036800' => 'sbr', 'Sabra11G0103800' => 'sbr', 'Sabra13G0096300' => 'sbr', 'Sabra16G0262300' => 'sbr', 'Sabra18G0091700' => 'sbr', 'Sabra19G0095400' => 'sbr', 'SalBow6G3080' => 'sbo', 'SalBow7G1157' => 'sbo', 'SalBow7G2123' => 'sbo', 'SalBow7G2285' => 'sbo', 'SalBow7G3537' => 'sbo', 'SalBow8G2947' => 'sbo', 'SalBow8G4463' => 'sbo', 'SalBow8G5466' => 'sbo', 'Sc01g0001750' => 'sci', 'Sc02g0006640' => 'sci', 'Sc02g0006670' => 'sci', 'Sc04g0008220' => 'sci', 'Sc05g0006190' => 'sci', 'Sc08g0002760' => 'sci', 'Sc17g0006170' => 'sci', 'Sc22g0002050' => 'sci', 'Sc23g0001190' => 'sci', 'Sc24g0000980' => 'sci', 'Sed0006245' => 'sed', 'Sed0007543' => 'sed', 'Sed0009411' => 'sed', 'Sed0010765' => 'sed', 'Sed0012944' => 'sed', 'Sed0014682' => 'sed', 'Sed0016174' => 'sed', 'Sed0016796' => 'sed', 'Sed0020317' => 'sed', 'Sed0021467' => 'sed', 'SEGI_01316' => 'sgi', 'SEGI_03374' => 'sgi', 'SEGI_16265' => 'sgi', 'SEGI_18569' => 'sgi', 'SEGI_20351' => 'sgi', 'SEGI_26395' => 'sgi', 'SEGI_29469' => 'sgi', 'SEGI_34771' => 'sgi', 'SEGI_36769' => 'sgi', 'SEGI_37139' => 'sgi', 'SGA_v2.0_scaffold100G29687' => 'sas', 'SGA_v2.0_scaffold118G32472' => 'sas', 'SGA_v2.0_scaffold14G07051' => 'sas', 'SGA_v2.0_scaffold183G39845' => 'sas', 'SGA_v2.0_scaffold1G00174' => 'sas', 'SGA_v2.0_scaffold22G09714' => 'sas', 'SGA_v2.0_scaffold333G48992' => 'sas', 'SGA_v2.0_scaffold46G17491' => 'sas', 'SGA_v2.0_scaffold49G18294' => 'sas', 'SGA_v2.0_scaffold63G21658' => 'sas', 'SHI01741' => 'shi', 'SHI05771' => 'shi', 'SHI18077' => 'shi', 'SHI20525' => 'shi', 'SHI20527' => 'shi', 'SHI20528' => 'shi', 'SMO172G0185' => 'smo', 'SMO198G0020' => 'smo', 'SMO351G0006' => 'smo', 'SMO356G0118' => 'smo', 'SMO358G0296' => 'smo', 'SMO367G0079' => 'smo', 'SMO367G1277' => 'smo', 'Solyc01g014220.3' => 'sly', 'Solyc01g111770.2' => 'sly', 'Solyc02g078180.3' => 'sly', 'Solyc03g006430.3' => 'sly', 'Solyc03g006456.1' => 'sly', 'Solyc03g079860.2' => 'sly', 'Solyc04g079770.3' => 'sly', 'Solyc05g007430.4' => 'sly', 'Solyc07g063150.3' => 'sly', 'Solyc08g016620.3' => 'sly', 'Solyc09g057590.3' => 'sly', 'Solyc09g057600.1' => 'sly', 'Solyc10g009050.3' => 'sly', 'Solyc11g017420.2' => 'sly', 'Sopen01g053810' => 'spe', 'Sopen02g023040' => 'spe', 'Sopen03g002440' => 'spe', 'Sopen04g033350' => 'spe', 'Sopen05g003310' => 'spe', 'Sopen07g004050' => 'spe', 'Sopen07g031340' => 'spe', 'Sopen08g006990' => 'spe', 'Sopen10g004830' => 'spe', 'Sopen11g009370' => 'spe', 'Sp1g24450' => 'spa', 'Sp1g29670' => 'spa', 'Sp1g39600' => 'spa', 'Sp2g11080' => 'spa', 'Sp2g13970' => 'spa', 'Sp4g16130' => 'spa', 'Sp6g13080' => 'spa', 'Sp7g37270' => 'spa', 'TAR371G0065' => 'tar', 'TAR376G0340' => 'tar', 'TAR376G0435' => 'tar', 'TAR381G0002' => 'tar', 'TAR381G1236' => 'tar', 'TAR624G0055' => 'tar', 'TAR624G0324' => 'tar', 'TAR624G0696' => 'tar', 'TAR624G0906' => 'tar', 'TAR625G0107' => 'tar', 'TAR626G0015' => 'tar', 'TAR626G1356' => 'tar', 'TAR627G0888' => 'tar', 'TAR628G0399' => 'tar', 'TAR628G1327' => 'tar', 'TAR629G2831' => 'tar', 'TAR629G2874' => 'tar', 'TAR633G1432' => 'tar', 'TAR633G2771' => 'tar', 'THA.LOC104803394' => 'tha', 'THA.LOC104805153' => 'tha', 'THA.LOC104806784' => 'tha', 'THA.LOC104810473' => 'tha', 'THA.LOC104813100' => 'tha', 'THA.LOC104814215' => 'tha', 'THA.LOC104815554' => 'tha', 'THA.LOC104820544' => 'tha', 'THA.LOC104824754' => 'tha', 'THA.LOC104827717' => 'tha', 'Thecc.02G031400' => 'tca', 'Thecc.02G055900' => 'tca', 'Thecc.02G350800' => 'tca', 'Thecc.06G150900' => 'tca', 'Thecc.06G186600' => 'tca', 'Thecc.07G089600' => 'tca', 'Thecc.08G020400' => 'tca', 'Thecc.08G182100' => 'tca', 'Thhalv10000873m.g' => 'esa', 'Thhalv10004185m.g' => 'esa', 'Thhalv10006981m.g' => 'esa', 'Thhalv10007204m.g' => 'esa', 'Thhalv10011374m.g' => 'esa', 'Thhalv10013482m.g' => 'esa', 'Thhalv10017801m.g' => 'esa', 'Thhalv10024983m.g' => 'esa', 'TPR.G12072' => 'tpr', 'TPR.G15769' => 'tpr', 'TPR.G16504' => 'tpr', 'TPR.G16506' => 'tpr', 'TPR.G24345' => 'tpr', 'TPR.G26666' => 'tpr', 'TPR.G27320' => 'tpr', 'TPR.G31819' => 'tpr', 'TPR.G38879' => 'tpr', 'TPR.G39015' => 'tpr', 'TPR.G8819' => 'tpr', 'TWI09G0924' => 'twi', 'TWI12G0811' => 'twi', 'TWI12G1294' => 'twi', 'TWI31G0150' => 'twi', 'TWI36G1262' => 'twi', 'TWI38G1287' => 'twi', 'TWI38G1633' => 'twi', 'TWI38G1982' => 'twi', 'TWI39G0116' => 'twi', 'TWI60G1011' => 'twi', 'TWI63G0171' => 'twi', 'TWI73G0839' => 'twi', 'TWI79G1511' => 'twi', 'unitig_0.g915' => 'ugi', 'unitig_0.g916' => 'ugi', 'unitig_21.g20219' => 'ugi', 'unitig_21.g20416' => 'ugi', 'unitig_578.g16132' => 'ugi', 'unitig_578.g16718' => 'ugi', 'unitig_62.g23481' => 'ugi', 'unitig_744.g24535' => 'ugi', 'unitig_749.g13525' => 'ugi', 'vmacro01248' => 'vma', 'vmacro02290' => 'vma', 'vmacro10946' => 'vma', 'vmacro11865' => 'vma', 'vmacro12493' => 'vma', 'vmacro17322' => 'vma', 'vmacro21599' => 'vma', 'vmacro23041' => 'vma', 'VMungo0251G0004' => 'vmu', 'VMungo0251G2639' => 'vmu', 'VMungo0251G2967' => 'vmu', 'VMungo0540G0864' => 'vmu', 'VMungo0540G1569' => 'vmu', 'VMungo0647G0317' => 'vmu', 'VMungo0720G1373' => 'vmu', 'VMungo0720G1508' => 'vmu', 'VMungo1080G0485' => 'vmu', 'VMungo1215G3177' => 'vmu', 'Zm00001eb112600' => 'zma', 'Zm00001eb120220' => 'zma', 'Zm00001eb153240' => 'zma', 'Zm00001eb168880' => 'zma', 'Zm00001eb213920' => 'zma', 'Zm00001eb228280' => 'zma', 'Zm00001eb254580' => 'zma', 'Zm00001eb272180' => 'zma', 'Zm00001eb293190' => 'zma', 'Zm00001eb322930' => 'zma', 'Zm00001eb353360' => 'zma', 'Zm00001eb353390' => 'zma', 'Zm00001eb353430' => 'zma', 'Zm00001eb353440' => 'zma', 'Zm00001eb353780' => 'zma' ) $gf_id = 'HOM05D000499' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000499' ) $data_identifier = 'HOM05D000499' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 29, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 12, 'amhyb' => (int) 8, 'aly' => (int) 12, 'aox' => (int) 9, 'arhy' => (int) 26, 'ath' => (int) 8, 'atr' => (int) 7, 'acertr' => (int) 10, 'cqu' => (int) 15, 'bca' => (int) 29, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 11, 'cansat' => (int) 8, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 9, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 8, 'cpa' => (int) 10, 'csa' => (int) 7, 'camsi' => (int) 20, 'dca' => (int) 8, 'din' => (int) 12, 'dzi' => (int) 14, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 6, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 38, 'gra' => (int) 16, 'vvi' => (int) 8, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 5, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 11, 'lja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 11, 'mpo' => (int) 3, 'mbi' => (int) 14, 'mdo' => (int) 14, 'mtr' => (int) 8, 'cme' => (int) 9, 'egut' => (int) 9, 'ama' => (int) 11, 'nta' => (int) 17, 'nnu' => (int) 11, 'oeu' => (int) 18, 'osa' => (int) 8, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 6, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 9, 'rsi' => (int) 9, 'sbr' => (int) 10, 'sbo' => (int) 8, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 10, 'sas' => (int) 10, 'shi' => (int) 6, 'smo' => (int) 7, 'sly' => (int) 14, 'spe' => (int) 10, 'spa' => (int) 8, 'tar' => (int) 19, 'tha' => (int) 10, 'tca' => (int) 8, 'esa' => (int) 8, 'tpr' => (int) 11, 'twi' => (int) 13, 'ugi' => (int) 9, 'vma' => (int) 8, 'vmu' => (int) 10, 'zma' => (int) 15 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb353780' $species_info = array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ) $local_species = 'pvu' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000499', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1066', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p29780' => 'bna', 'A02p33180' => 'bna', 'A03p16470' => 'bna', 'A03p66010' => 'bna', 'A04p25970' => 'bna', 'A06p01270' => 'bna', 'A06p46080' => 'bna', 'A07p11400' => 'bna', 'A08p01840' => 'bna', 'A08p08230' => 'bna', 'A08p25740' => 'bna', 'A09p32070' => 'bna', 'A09p37830' => 'bna', 'A09p42840' => 'bna', 'A09p42850' => 'bna', 'Aa31LG10G2060' => 'aar', 'Aa31LG2G7410' => 'aar', 'Aa31LG6G10200' => 'aar', 'Aa31LG6G16680' => 'aar', 'Aa31LG6G8470' => 'aar', 'Aa31LG9G12730' => 'aar', 'Aa31LG9G13680' => 'aar', 'Aa31LG9G14920' => 'aar', 'Aa31LG9G6650' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4977' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5467' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3254' => 'aag', 'Actinidia02578' => 'ach', 'Actinidia07693' => 'ach', 'Actinidia08413' => 'ach', 'Actinidia08414' => 'ach', 'Actinidia15289' => 'ach', 'Actinidia19871' => 'ach', 'Actinidia21475' => 'ach', 'Actinidia22576' => 'ach', 'Actinidia28327' => 'ach', 'Actinidia32491' => 'ach', 'Actinidia39463' => 'ach', 'Actinidia39571' => 'ach', 'Ah.01g013750' => 'amhyb', 'Ah.01g023210' => 'amhyb', 'Ah.04g164850' => 'amhyb', 'Ah.05g178060' => 'amhyb', 'Ah.07g204270' => 'amhyb', 'Ah.07g208480' => 'amhyb', 'Ah.09g237410' => 'amhyb', 'Ah.14g089460' => 'amhyb', 'AL1G41790' => 'aly', 'AL1G49050' => 'aly', 'AL1G53810' => 'aly', 'AL1G61400' => 'aly', 'AL4G18580' => 'aly', 'AL5G12510' => 'aly', 'AL5G12540' => 'aly', 'AL6G43230' => 'aly', 'AL7G10370' => 'aly', 'AL7G19250' => 'aly', 'AL8G12240' => 'aly', 'AL8G18540' => 'aly', 'Aqoxy1G02409' => 'aox', 'Aqoxy2G03993' => 'aox', 'Aqoxy3G03357' => 'aox', 'Aqoxy4G00785' => 'aox', 'Aqoxy5G02598' => 'aox', 'Aqoxy6G00132' => 'aox', 'Aqoxy7G01776' => 'aox', 'Aqoxy7G02316' => 'aox', 'Aqoxy7G03973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.12AFKW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B8730' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27IQR1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3F75VG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3RE0GA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41TCQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.527VTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FIR39' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5W8UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DA38EV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ63HS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H1I32C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HC27T5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4M8AP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7N3CZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9UVDZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LS1NQA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT1D4B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SKC4TM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCFV76' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF9Q1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQWD9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1ZM88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WE07RT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YCK7VH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJE6Q6' => 'arhy', 'AT1G28240' => 'ath', 'AT1G34550' => 'ath', 'AT1G53040' => 'ath', 'AT2G02910' => 'ath', 'AT4G09630' => 'ath', 'AT4G38500' => 'ath', 'AT5G42660' => 'ath', 'AT5G46220' => 'ath', 'ATR0152G026' => 'atr', 'ATR0564G343' => 'atr', 'ATR0706G151' => 'atr', 'ATR0733G207' => 'atr', 'ATR0751G234' => 'atr', 'ATR0807G048' => 'atr', 'ATR1091G084' => 'atr', 'Atru.chr10.1229' => 'acertr', 'Atru.chr10.1230' => 'acertr', 'Atru.chr10.1874' => 'acertr', 'Atru.chr11.1808' => 'acertr', 'Atru.chr13.1795' => 'acertr', 'Atru.chr13.570' => 'acertr', 'Atru.chr2.2608' => 'acertr', 'Atru.chr2.2609' => 'acertr', 'Atru.chr5.3428' => 'acertr', 'Atru.chr8.1171' => 'acertr', 'AUR62004651' => 'cqu', 'AUR62008675' => 'cqu', 'AUR62010014' => 'cqu', 'AUR62013004' => 'cqu', 'AUR62014825' => 'cqu', 'AUR62015015' => 'cqu', 'AUR62015151' => 'cqu', 'AUR62017020' => 'cqu', 'AUR62019422' => 'cqu', 'AUR62023570' => 'cqu', 'AUR62025571' => 'cqu', 'AUR62029098' => 'cqu', 'AUR62033863' => 'cqu', 'AUR62034296' => 'cqu', 'AUR62040075' => 'cqu', 'BcaB02g07334' => 'bca', 'BcaB02g10575' => 'bca', 'BcaB03g12119' => 'bca', 'BcaB03g12120' => 'bca', 'BcaB03g13945' => 'bca', 'BcaB04g17123' => 'bca', 'BcaB04g17867' => 'bca', 'BcaB04g19839' => 'bca', 'BcaB07g30317' => 'bca', 'BcaB07g32432' => 'bca', 'BcaB07g33362' => 'bca', 'BcaB08g36611' => 'bca', 'BcaC01g00028' => 'bca', 'BcaC01g01356' => 'bca', 'BcaC01g02034' => 'bca', 'BcaC01g06051' => 'bca', 'BcaC03g16839' => 'bca', 'BcaC03g17176' => 'bca', 'BcaC05g26829' => 'bca', 'BcaC06g31490' => 'bca', 'BcaC06g35344' => 'bca', 'BcaC06g36570' => 'bca', 'BcaC07g37537' => 'bca', 'BcaC08g43491' => 'bca', 'BcaC08g43773' => 'bca', 'BcaNung00234' => 'bca', 'BcaNung01982' => 'bca', 'BcaNung03707' => 'bca', 'BcaNung06454' => 'bca', 'BolC2t10762H' => 'bol', 'BolC2t11191H' => 'bol', 'BolC3t14322H' => 'bol', 'BolC3t19747H' => 'bol', 'BolC3t21425H' => 'bol', 'BolC4t27800H' => 'bol', 'BolC5t31423H' => 'bol', 'BolC6t35951H' => 'bol', 'BolC6t36282H' => 'bol', 'BolC7t40678H' => 'bol', 'BolC7t40679H' => 'bol', 'BolC7t42222H' => 'bol', 'BolC7t43492H' => 'bol', 'BolC7t46785H' => 'bol', 'BolC8t47853H' => 'bol', 'BolC9t56805H' => 'bol', 'BraA02t08000Z' => 'bra', 'BraA02t08341Z' => 'bra', 'BraA03t10936Z' => 'bra', 'BraA03t15657Z' => 'bra', 'BraA04t18100Z' => 'bra', 'BraA05t20523Z' => 'bra', 'BraA06t23353Z' => 'bra', 'BraA06t27473Z' => 'bra', 'BraA06t27769Z' => 'bra', 'BraA07t28928Z' => 'bra', 'BraA08t32236Z' => 'bra', 'BraA08t32841Z' => 'bra', 'BraA08t34524Z' => 'bra', 'BraA09t38742Z' => 'bra', 'BraA09t39295Z' => 'bra', 'C02p47180' => 'bna', 'C02p50990' => 'bna', 'C03p19360' => 'bna', 'C03p74950' => 'bna', 'C03p91000' => 'bna', 'C04p63260' => 'bna', 'C05p27050' => 'bna', 'C06p08750' => 'bna', 'C06p11490' => 'bna', 'C07p02820' => 'bna', 'C07p17180' => 'bna', 'C07p29440' => 'bna', 'C07p63730' => 'bna', 'C09p39260' => 'bna', 'CAN.G1164.34' => 'can', 'CAN.G1164.39' => 'can', 'CAN.G1530.3' => 'can', 'CAN.G162.61' => 'can', 'CAN.G176.6' => 'can', 'CAN.G289.49' => 'can', 'CAN.G370.21' => 'can', 'CAN.G370.22' => 'can', 'CAN.G371.117' => 'can', 'CAN.G58.37' => 'can', 'CAN.G588.98' => 'can', 'CANSAT21G2266' => 'cansat', 'CANSAT25G2799' => 'cansat', 'CANSAT35G0862' => 'cansat', 'CANSAT35G1704' => 'cansat', 'CANSAT35G1760' => 'cansat', 'CANSAT56G3971' => 'cansat', 'CANSAT56G4116' => 'cansat', 'CANSAT80G1259' => 'cansat', 'CARHR027730' => 'chi', 'CARHR033880' => 'chi', 'CARHR043270' => 'chi', 'CARHR145330' => 'chi', 'CARHR145340' => 'chi', 'CARHR175570' => 'chi', 'CARHR181570' => 'chi', 'CARHR258470' => 'chi', 'CARHR260490' => 'chi', 'CARHR294220' => 'chi', 'Carub.0001s2668' => 'cru', 'Carub.0001s3257' => 'cru', 'Carub.0001s4220' => 'cru', 'Carub.0005s0179' => 'cru', 'Carub.0006s2807' => 'cru', 'Carub.0007s0039' => 'cru', 'Carub.0008s0169' => 'cru', 'Carub.0008s0636' => 'cru', 'Ca_00338_v3' => 'car', 'Ca_00542_v3' => 'car', 'Ca_01844_v3' => 'car', 'Ca_10611_v3' => 'car', 'Ca_13326_v3' => 'car', 'Ca_17944_v3' => 'car', 'Ca_18546_v3' => 'car', 'Ca_24219_v3' => 'car', 'Ca_29972_v3' => 'car', 'CBR_g3681' => 'cbr', 'CBR_g40021' => 'cbr', 'Cc01_g08140' => 'ccan', 'Cc02_g13410' => 'ccan', 'Cc02_g37480' => 'ccan', 'Cc05_g12030' => 'ccan', 'Cc09_g03370' => 'ccan', 'Cc09_g10300' => 'ccan', 'Cc10_g03530' => 'ccan', 'Cc10_g11380' => 'ccan', 'CDE01G0176' => 'cde', 'CDE02G0675' => 'cde', 'CDE02G0942' => 'cde', 'CDE02G1153' => 'cde', 'CDE02G4177' => 'cde', 'CDE04G2117' => 'cde', 'CDE04G2736' => 'cde', 'CDE08G1161' => 'cde', 'CDE09G1238' => 'cde', 'Cfa000467' => 'cfa', 'Cfa000947' => 'cfa', 'Cfa004969' => 'cfa', 'Cfa005284' => 'cfa', 'Cfa008993' => 'cfa', 'Cfa018187' => 'cfa', 'Cfa018454' => 'cfa', 'Cfa020585' => 'cfa', 'Ciclev10000424m.g' => 'ccl', 'Ciclev10003605m.g' => 'ccl', 'Ciclev10007828m.g' => 'ccl', 'Ciclev10014620m.g' => 'ccl', 'Ciclev10015169m.g' => 'ccl', 'Ciclev10018291m.g' => 'ccl', 'Ciclev10028256m.g' => 'ccl', 'Ciclev10033822m.g' => 'ccl', 'CiPaw.05G060300' => 'cil', 'CiPaw.05G085000' => 'cil', 'CiPaw.06G083700' => 'cil', 'CiPaw.06G120300' => 'cil', 'CiPaw.09G060500' => 'cil', 'CiPaw.09G123800' => 'cil', 'CiPaw.11G169700' => 'cil', 'CiPaw.12G118300' => 'cil', 'CiPaw.15G071000' => 'cil', 'CiPaw.15G081900' => 'cil', 'ClCG01G024610' => 'cla', 'ClCG03G006070' => 'cla', 'ClCG05G019250' => 'cla', 'ClCG09G009500' => 'cla', 'ClCG11G008200' => 'cla', 'ClCG11G018080' => 'cla', 'COL.COLO4_17373' => 'col', 'COL.COLO4_22994' => 'col', 'COL.COLO4_26389' => 'col', 'COL.COLO4_27170' => 'col', 'COL.COLO4_31074' => 'col', 'COL.COLO4_31465' => 'col', 'COL.COLO4_36438' => 'col', 'COL.COLO4_36439' => 'col', 'Cpa.g.c38781' => 'cpa', 'Cpa.g.sc128.12' => 'cpa', 'Cpa.g.sc166.7' => 'cpa', 'Cpa.g.sc166.8' => 'cpa', 'Cpa.g.sc20.111' => 'cpa', 'Cpa.g.sc27.31' => 'cpa', 'Cpa.g.sc64.36' => 'cpa', 'Cpa.g.sc64.37' => 'cpa', 'Cpa.g.sc66.49' => 'cpa', 'Cpa.g.sc80.64' => 'cpa', 'CsaV3_1G012320' => 'csa', 'CsaV3_2G008480' => 'csa', 'CsaV3_2G033450' => 'csa', 'CsaV3_3G044830' => 'csa', 'CsaV3_4G033710' => 'csa', 'CsaV3_6G051730' => 'csa', 'CsaV3_7G025350' => 'csa', 'CSS0001067' => 'camsi', 'CSS0005996' => 'camsi', 'CSS0006590' => 'camsi', 'CSS0009673' => 'camsi', 'CSS0010201' => 'camsi', 'CSS0010549' => 'camsi', 'CSS0011364' => 'camsi', 'CSS0014473' => 'camsi', 'CSS0014961' => 'camsi', 'CSS0020191' => 'camsi', 'CSS0021165' => 'camsi', 'CSS0022306' => 'camsi', 'CSS0030591' => 'camsi', 'CSS0030696' => 'camsi', 'CSS0032653' => 'camsi', 'CSS0037487' => 'camsi', 'CSS0041102' => 'camsi', 'CSS0041261' => 'camsi', 'CSS0046246' => 'camsi', 'CSS0049256' => 'camsi', 'DCAR_004075' => 'dca', 'DCAR_011538' => 'dca', 'DCAR_019553' => 'dca', 'DCAR_020952' => 'dca', 'DCAR_021739' => 'dca', 'DCAR_027407' => 'dca', 'DCAR_027913' => 'dca', 'DCAR_028066' => 'dca', 'Dinv05899' => 'din', 'Dinv07563' => 'din', 'Dinv08010' => 'din', 'Dinv14125' => 'din', 'Dinv20172' => 'din', 'Dinv30743' => 'din', 'Dinv31229' => 'din', 'Dinv34162' => 'din', 'Dinv36028' => 'din', 'Dinv39368' => 'din', 'Dinv40565' => 'din', 'Dinv41706' => 'din', 'Duzib052G0089' => 'dzi', 'Duzib116G0641' => 'dzi', 'Duzib132G0069' => 'dzi', 'Duzib132G1219' => 'dzi', 'Duzib147G0278' => 'dzi', 'Duzib160G0480' => 'dzi', 'Duzib170G0661' => 'dzi', 'Duzib177G0591' => 'dzi', 'Duzib187G1353' => 'dzi', 'Duzib192G0858' => 'dzi', 'Duzib192G0883' => 'dzi', 'Duzib213G0506' => 'dzi', 'Duzib235G0289' => 'dzi', 'Duzib251G0422' => 'dzi', 'ECA232G3898' => 'eca', 'ECA233G5950' => 'eca', 'ECA234G1699' => 'eca', 'ECA234G2421' => 'eca', 'ECA236G0426' => 'eca', 'ECA236G4331' => 'eca', 'ECA248G2573' => 'eca', 'EL10Ac1g00077' => 'bvu', 'EL10Ac1g01746' => 'bvu', 'EL10Ac2g03464' => 'bvu', 'EL10Ac4g08176' => 'bvu', 'EL10Ac7g17521' => 'bvu', 'EL10Ac8g20386' => 'bvu', 'EL10Ac9g21343' => 'bvu', 'EL10Ac9g22688' => 'bvu', 'Eucgr.B03434' => 'egr', 'Eucgr.D00618' => 'egr', 'Eucgr.E02395' => 'egr', 'Eucgr.F01129' => 'egr', 'Eucgr.F02622' => 'egr', 'Eucgr.F04207' => 'egr', 'FAN01G0570' => 'fan', 'FAN03G3351' => 'fan', 'FAN06G3702' => 'fan', 'FAN07G2149' => 'fan', 'FAN10G3758' => 'fan', 'FAN11G1170' => 'fan', 'FAN11G2050' => 'fan', 'FAN11G2724' => 'fan', 'FAN12G1700' => 'fan', 'FAN12G2028' => 'fan', 'FAN15G1160' => 'fan', 'FAN15G3063' => 'fan', 'FAN16G2540' => 'fan', 'FAN16G3077' => 'fan', 'FAN16G3624' => 'fan', 'FAN17G0221' => 'fan', 'FAN20G2492' => 'fan', 'FAN20G2905' => 'fan', 'FAN21G0548' => 'fan', 'FAN21G1300' => 'fan', 'FAN22G0077' => 'fan', 'FAN22G1315' => 'fan', 'FAN24G1280' => 'fan', 'FAN24G1445' => 'fan', 'FAN24G3527' => 'fan', 'FAN25G0464' => 'fan', 'FAN25G2885' => 'fan', 'FAN25G3270' => 'fan', 'FAN27G1101' => 'fan', 'FAN27G2846' => 'fan', 'FAN27G3524' => 'fan', 'FvH4_2g11770' => 'fve', 'FvH4_2g15630' => 'fve', 'FvH4_3g05570' => 'fve', 'FvH4_3g09110' => 'fve', 'FvH4_3g19940' => 'fve', 'FvH4_4g04821' => 'fve', 'FvH4_4g31480' => 'fve', 'FvH4_7g01740' => 'fve', 'Glyma.05G130400' => 'gma', 'Glyma.05G156400' => 'gma', 'Glyma.07G197000' => 'gma', 'Glyma.08G085151' => 'gma', 'Glyma.08G114500' => 'gma', 'Glyma.08G300400' => 'gma', 'Glyma.10G215800' => 'gma', 'Glyma.12G224400' => 'gma', 'Glyma.13G179300' => 'gma', 'Glyma.13G218151' => 'gma', 'Glyma.13G238800' => 'gma', 'Glyma.13G276900' => 'gma', 'Glyma.14G078200' => 'gma', 'Glyma.15G074500' => 'gma', 'Glyma.15G094100' => 'gma', 'Glyma.17G247200' => 'gma', 'Glyma.18G120100' => 'gma', 'Glyma.20G176000' => 'gma', 'Gohir.A01G063600' => 'ghi', 'Gohir.A01G170301' => 'ghi', 'Gohir.A02G060500' => 'ghi', 'Gohir.A05G133850' => 'ghi', 'Gohir.A05G161400' => 'ghi', 'Gohir.A06G012900' => 'ghi', 'Gohir.A06G035901' => 'ghi', 'Gohir.A06G127100' => 'ghi', 'Gohir.A06G210500' => 'ghi', 'Gohir.A08G008650' => 'ghi', 'Gohir.A09G072700' => 'ghi', 'Gohir.A09G088301' => 'ghi', 'Gohir.A10G040600' => 'ghi', 'Gohir.A12G036300' => 'ghi', 'Gohir.A12G143350' => 'ghi', 'Gohir.A12G165500' => 'ghi', 'Gohir.A13G145700' => 'ghi', 'Gohir.D01G050000' => 'ghi', 'Gohir.D01G051366' => 'ghi', 'Gohir.D01G161350' => 'ghi', 'Gohir.D02G065900' => 'ghi', 'Gohir.D05G164200' => 'ghi', 'Gohir.D05G355500' => 'ghi', 'Gohir.D06G010400' => 'ghi', 'Gohir.D06G111250' => 'ghi', 'Gohir.D06G132000' => 'ghi', 'Gohir.D06G210500' => 'ghi', 'Gohir.D07G165675' => 'ghi', 'Gohir.D08G062240' => 'ghi', 'Gohir.D08G086101' => 'ghi', 'Gohir.D08G138060' => 'ghi', 'Gohir.D09G072300' => 'ghi', 'Gohir.D10G041400' => 'ghi', 'Gohir.D11G191020' => 'ghi', 'Gohir.D11G212066' => 'ghi', 'Gohir.D12G036300' => 'ghi', 'Gohir.D12G168600' => 'ghi', 'Gohir.D13G150600' => 'ghi', 'Gorai.001G057300' => 'gra', 'Gorai.002G069900' => 'gra', 'Gorai.002G200000' => 'gra', 'Gorai.003G067600' => 'gra', 'Gorai.005G074800' => 'gra', 'Gorai.006G087300' => 'gra', 'Gorai.008G037500' => 'gra', 'Gorai.008G181400' => 'gra', 'Gorai.009G169400' => 'gra', 'Gorai.009G387900' => 'gra', 'Gorai.010G013300' => 'gra', 'Gorai.010G153800' => 'gra', 'Gorai.010G255800' => 'gra', 'Gorai.011G043700' => 'gra', 'Gorai.011G198900' => 'gra', 'Gorai.013G168400' => 'gra', 'GSVIVG01005212001' => 'vvi', 'GSVIVG01006163001' => 'vvi', 'GSVIVG01009625001' => 'vvi', 'GSVIVG01014338001' => 'vvi', 'GSVIVG01020005001' => 'vvi', 'GSVIVG01021450001' => 'vvi', 'GSVIVG01023975001' => 'vvi', 'GSVIVG01034490001' => 'vvi', 'HanXRQChr04g0112071' => 'han', 'HanXRQChr05g0131151' => 'han', 'HanXRQChr09g0262371' => 'han', 'HanXRQChr09g0268401' => 'han', 'HanXRQChr10g0279241' => 'han', 'HanXRQChr10g0297961' => 'han', 'HanXRQChr11g0326231' => 'han', 'HanXRQChr11g0328471' => 'han', 'HanXRQChr16g0507941' => 'han', 'HanXRQChr17g0560211' => 'han', 'Haze_02108' => 'cav', 'Haze_02428' => 'cav', 'Haze_05593' => 'cav', 'Haze_06448' => 'cav', 'Haze_09427' => 'cav', 'Haze_12022' => 'cav', 'Haze_17612' => 'cav', 'Haze_17928' => 'cav', 'Hma1.2p1_0032F.1_g019250' => 'hma', 'Hma1.2p1_0163F.1_g072690' => 'hma', 'Hma1.2p1_0265F.1_g106710' => 'hma', 'Hma1.2p1_0286F.1_g113970' => 'hma', 'Hma1.2p1_0363F.1_g136640' => 'hma', 'Hma1.2p1_0584F.1_g183470' => 'hma', 'Hma1.2p1_0885F.1_g232570' => 'hma', 'HPP92_006022' => 'vpl', 'HPP92_007320' => 'vpl', 'HPP92_011521' => 'vpl', 'HPP92_019387' => 'vpl', 'HPP92_024038' => 'vpl', 'Hund05891' => 'sun', 'Hund06450' => 'sun', 'Hund12053' => 'sun', 'Hund16800' => 'sun', 'Hund21222' => 'sun', 'Hund22896' => 'sun', 'Hund23746' => 'sun', 'Hund27083' => 'sun', 'Lalb_Chr02g0141831' => 'lal', 'Lalb_Chr02g0141841' => 'lal', 'Lalb_Chr05g0220411' => 'lal', 'Lalb_Chr06g0162081' => 'lal', 'Lalb_Chr09g0327651' => 'lal', 'Lalb_Chr13g0295051' => 'lal', 'Lalb_Chr15g0086801' => 'lal', 'Lalb_Chr16g0383781' => 'lal', 'Lalb_Chr16g0383791' => 'lal', 'Lalb_Chr18g0055441' => 'lal', 'Lalb_Chr18g0059611' => 'lal', 'Lalb_Chr20g0109661' => 'lal', 'Lalb_Chr20g0109831' => 'lal', 'Lalb_Chr20g0121871' => 'lal', 'Lalb_Chr22g0355361' => 'lal', 'Lalb_Chr25g0286371' => 'lal', 'Lj1A1187G43' => 'lonja', 'Lj1A1205T50' => 'lonja', 'Lj1A800G33' => 'lonja', 'Lj1C1187T7' => 'lonja', 'Lj1C843T11' => 'lonja', 'Lj1g0010940' => 'lja', 'Lj2A288T69' => 'lonja', 'Lj3g0024276' => 'lja', 'Lj4A47T76' => 'lonja', 'Lj4g0005805' => 'lja', 'Lj4g0006097' => 'lja', 'Lj4g0008528' => 'lja', 'Lj4g0024907' => 'lja', 'Lj5g0012472' => 'lja', 'Lj5g0018648' => 'lja', 'Lj6C789G1' => 'lonja', 'Lj6g0004000' => 'lja', 'Lj7A292G67' => 'lonja', 'Lj7A292T64' => 'lonja', 'Lj9A400T58' => 'lonja', 'Lsat_1_v5_gn_1_126181' => 'lsa', 'Lsat_1_v5_gn_4_123041' => 'lsa', 'Lsat_1_v5_gn_4_133620' => 'lsa', 'Lsat_1_v5_gn_4_53221' => 'lsa', 'Lsat_1_v5_gn_4_71961' => 'lsa', 'Lsat_1_v5_gn_7_105241' => 'lsa', 'Lsat_1_v5_gn_7_21361' => 'lsa', 'Lsat_1_v5_gn_7_28860' => 'lsa', 'Lsat_1_v5_gn_7_31260' => 'lsa', 'Lsat_1_v5_gn_8_52801' => 'lsa', 'Manes.02G191400' => 'mes', 'Manes.03G110100' => 'mes', 'Manes.04G071100' => 'mes', 'Manes.05G100500' => 'mes', 'Manes.05G164700' => 'mes', 'Manes.15G087000' => 'mes', 'Manes.15G121500' => 'mes', 'Manes.16G028300' => 'mes', 'Manes.17G046100' => 'mes', 'Manes.17G069800' => 'mes', 'Manes.18G100500' => 'mes', 'Mapoly0002s0109' => 'mpo', 'Mapoly0024s0007' => 'mpo', 'Mapoly0089s0032' => 'mpo', 'MBI04_g42241_MAGBIO' => 'mbi', 'MBI05_g11988_MAGBIO' => 'mbi', 'MBI05_g35452_MAGBIO' => 'mbi', 'MBI07_g30179_MAGBIO' => 'mbi', 'MBI07_g35859_MAGBIO' => 'mbi', 'MBI07_g35860_MAGBIO' => 'mbi', 'MBI07_g37166_MAGBIO' => 'mbi', 'MBI08_g18172_MAGBIO' => 'mbi', 'MBI09_g08441_MAGBIO' => 'mbi', 'MBI13_g01676_MAGBIO' => 'mbi', 'MBI14_g42955_MAGBIO' => 'mbi', 'MBI16_g13161_MAGBIO' => 'mbi', 'MBI17_g27204_MAGBIO' => 'mbi', 'MBI19_g21595_MAGBIO' => 'mbi', 'MD00G1148400' => 'mdo', 'MD02G1301200' => 'mdo', 'MD03G1227800' => 'mdo', 'MD05G1041100' => 'mdo', 'MD05G1124800' => 'mdo', 'MD05G1284000' => 'mdo', 'MD05G1338800' => 'mdo', 'MD05G1338900' => 'mdo', 'MD07G1022800' => 'mdo', 'MD10G1047500' => 'mdo', 'MD10G1127500' => 'mdo', 'MD10G1262300' => 'mdo', 'MD10G1293800' => 'mdo', 'MD16G1074300' => 'mdo', 'Medtr1g021670' => 'mtr', 'Medtr1g096320' => 'mtr', 'Medtr2g013690' => 'mtr', 'Medtr2g019450' => 'mtr', 'Medtr2g085170' => 'mtr', 'Medtr4g088785' => 'mtr', 'Medtr8g055930' => 'mtr', 'Medtr8g085850' => 'mtr', 'MELO3C002605.2' => 'cme', 'MELO3C003891.2' => 'cme', 'MELO3C004012.2' => 'cme', 'MELO3C007134.2' => 'cme', 'MELO3C008118.2' => 'cme', 'MELO3C016700.2' => 'cme', 'MELO3C024127.2' => 'cme', 'MELO3C033361.2' => 'cme', 'MELO3C033362.2' => 'cme', 'Migut.C00430' => 'egut', 'Migut.C01246' => 'egut', 'Migut.E00101' => 'egut', 'Migut.H01486' => 'egut', 'Migut.H01939' => 'egut', 'Migut.K00360' => 'egut', 'Migut.M00910' => 'egut', 'Migut.M01139' => 'egut', 'Migut.N02677' => 'egut', 'MSTRG.13252' => 'ama', 'MSTRG.14701' => 'ama', 'MSTRG.1521' => 'ama', 'MSTRG.15884' => 'ama', 'MSTRG.16242' => 'ama', 'MSTRG.22285' => 'ama', 'MSTRG.22444' => 'ama', 'MSTRG.2349' => 'ama', 'MSTRG.26308' => 'ama', 'MSTRG.28296' => 'ama', 'MSTRG.9895' => 'ama', 'Nitab4.5_0000110g0060' => 'nta', 'Nitab4.5_0000420g0130' => 'nta', 'Nitab4.5_0000422g0030' => 'nta', 'Nitab4.5_0000560g0180' => 'nta', 'Nitab4.5_0000703g0100' => 'nta', 'Nitab4.5_0000786g0200' => 'nta', 'Nitab4.5_0001336g0020' => 'nta', 'Nitab4.5_0001796g0030' => 'nta', 'Nitab4.5_0003348g0060' => 'nta', 'Nitab4.5_0003698g0040' => 'nta', 'Nitab4.5_0003942g0090' => 'nta', 'Nitab4.5_0004775g0070' => 'nta', 'Nitab4.5_0004864g0030' => 'nta', 'Nitab4.5_0005615g0020' => 'nta', 'Nitab4.5_0009288g0030' => 'nta', 'Nitab4.5_0009341g0010' => 'nta', 'Nitab4.5_0009535g0010' => 'nta', 'Nn1g03995' => 'nnu', 'Nn1g04100' => 'nnu', 'Nn1g06530' => 'nnu', 'Nn3g16404' => 'nnu', 'Nn3g17212' => 'nnu', 'Nn3g20776' => 'nnu', 'Nn3g21923' => 'nnu', 'Nn5g27737' => 'nnu', 'Nn5g29461' => 'nnu', 'Nn7g38355' => 'nnu', 'Nn8g39873' => 'nnu', 'Oeu000548.2' => 'oeu', 'Oeu004672.1' => 'oeu', 'Oeu015605.2' => 'oeu', 'Oeu016092.1' => 'oeu', 'Oeu017879.3' => 'oeu', 'Oeu024910.1' => 'oeu', 'Oeu028965.1' => 'oeu', 'Oeu031269.1' => 'oeu', 'Oeu031270.1' => 'oeu', 'Oeu032535.1' => 'oeu', 'Oeu034151.1' => 'oeu', 'Oeu034152.1' => 'oeu', 'Oeu034588.2' => 'oeu', 'Oeu050846.1' => 'oeu', 'Oeu050849.2' => 'oeu', 'Oeu051063.2' => 'oeu', 'Oeu052368.1' => 'oeu', 'Oeu052370.1' => 'oeu', 'Os01g0210400' => 'osa', 'Os01g0304300' => 'osa', 'Os01g0749100' => 'osa', 'Os02g0745800' => 'osa', 'Os03g0769050' => 'osa', 'Os05g0531500' => 'osa', 'Os06g0724300' => 'osa', 'Os11g0198100' => 'osa', 'Peaxi162Scf00069g01425' => 'pax', 'Peaxi162Scf00280g00811' => 'pax', 'Peaxi162Scf00310g00615' => 'pax', 'Peaxi162Scf00362g00542' => 'pax', 'Peaxi162Scf00461g00310' => 'pax', 'Peaxi162Scf00530g00118' => 'pax', 'Peaxi162Scf00541g00057' => 'pax', 'Peaxi162Scf00661g00017' => 'pax', 'Peaxi162Scf00926g00027' => 'pax', 'Peaxi162Scf01064g00263' => 'pax', 'Peaxi162Scf01211g00135' => 'pax', 'PGR004G2336' => 'pgr', 'PGR042G0327' => 'pgr', 'PGR042G1957' => 'pgr', 'PGR042G2003' => 'pgr', 'PGR042G3929' => 'pgr', 'PGR083G1137' => 'pgr', 'PGR083G1364' => 'pgr', 'PGSC0003DMG400003381' => 'stu', 'PGSC0003DMG400003417' => 'stu', 'PGSC0003DMG400008981' => 'stu', 'PGSC0003DMG400012417' => 'stu', 'PGSC0003DMG400012823' => 'stu', 'PGSC0003DMG400016885' => 'stu', 'PGSC0003DMG400022812' => 'stu', 'PGSC0003DMG400029726' => 'stu', 'PGSC0003DMG401009243' => 'stu', 'PGSC0003DMG401031505' => 'stu', 'PGSC0003DMG402031505' => 'stu', 'Phvul.001G017600' => 'pvu', 'Phvul.002G193500' => 'pvu', 'Phvul.002G228900' => 'pvu', 'Phvul.002G236800' => 'pvu', 'Phvul.003G049500' => 'pvu', 'Phvul.005G072000' => 'pvu', 'Phvul.006G164800' => 'pvu', 'Phvul.006G185100' => 'pvu', 'Phvul.007G090000' => 'pvu', 'Potri.001G399800' => 'ptr', 'Potri.002G149900' => 'ptr', 'Potri.004G044100' => 'ptr', 'Potri.004G177600' => 'ptr', 'Potri.009G138000' => 'ptr', 'Potri.010G094000' => 'ptr', 'Potri.011G053000' => 'ptr', 'Potri.011G119300' => 'ptr', 'Potri.013G113700' => 'ptr', 'Potri.018G107800' => 'ptr', 'Potri.019G084100' => 'ptr', 'Pp3c14_23720' => 'ppa', 'Pp3c16_6340' => 'ppa', 'Pp3c23_13420' => 'ppa', 'Pp3c24_2740' => 'ppa', 'Pp3c25_860' => 'ppa', 'Pp3c8_21750' => 'ppa', 'Prupe.1G273000' => 'ppe', 'Prupe.1G273700' => 'ppe', 'Prupe.1G274100' => 'ppe', 'Prupe.2G023300' => 'ppe', 'Prupe.4G048000' => 'ppe', 'Prupe.4G080400' => 'ppe', 'Prupe.4G181200' => 'ppe', 'Prupe.8G056900' => 'ppe', 'Prupe.8G168700' => 'ppe', 'Psat1g189080' => 'psa', 'Psat1g204760' => 'psa', 'Psat4g175560' => 'psa', 'Psat4g177720' => 'psa', 'Psat5g244240' => 'psa', 'Psat6g010720' => 'psa', 'Psat6g187200' => 'psa', 'Psat7g072040' => 'psa', 'PSO017G3501' => 'pso', 'PSO063G2148' => 'pso', 'PSO063G5608' => 'pso', 'PSO210G6392' => 'pso', 'PSO541G2319' => 'pso', 'PSO541G2836' => 'pso', 'PSO541G4012' => 'pso', 'PSO541G6253' => 'pso', 'PSO675G0580' => 'pso', 'PSO675G0856' => 'pso', 'PSO675G5635' => 'pso', 'PSO675G9157' => 'pso', 'PSO832G1660' => 'pso', 'PSO832G1969' => 'pso', 'QL02p007186' => 'qlo', 'QL02p033904' => 'qlo', 'QL03p064391' => 'qlo', 'QL05p040593' => 'qlo', 'QL05p058242' => 'qlo', 'QL08p021825' => 'qlo', 'QL11p004981' => 'qlo', 'RcHm_v2.0_Chr1g0318301' => 'rch', 'RcHm_v2.0_Chr4g0418501' => 'rch', 'RcHm_v2.0_Chr4g0439971' => 'rch', 'RcHm_v2.0_Chr5g0008541' => 'rch', 'RcHm_v2.0_Chr5g0014101' => 'rch', 'RcHm_v2.0_Chr5g0014131' => 'rch', 'RcHm_v2.0_Chr5g0033621' => 'rch', 'RcHm_v2.0_Chr6g0272041' => 'rch', 'RcHm_v2.0_Chr6g0278831' => 'rch', 'Rhsim02G0130400' => 'rsi', 'Rhsim02G0171100' => 'rsi', 'Rhsim05G0053000' => 'rsi', 'Rhsim05G0053100' => 'rsi', 'Rhsim06G0096500' => 'rsi', 'Rhsim06G0096600' => 'rsi', 'Rhsim06G0199100' => 'rsi', 'Rhsim12G0062300' => 'rsi', 'Rhsim12G0062800' => 'rsi', 'Sabra02G0118600' => 'sbr', 'Sabra04G0027300' => 'sbr', 'Sabra04G0119500' => 'sbr', 'Sabra08G0112500' => 'sbr', 'Sabra11G0036800' => 'sbr', 'Sabra11G0103800' => 'sbr', 'Sabra13G0096300' => 'sbr', 'Sabra16G0262300' => 'sbr', 'Sabra18G0091700' => 'sbr', 'Sabra19G0095400' => 'sbr', 'SalBow6G3080' => 'sbo', 'SalBow7G1157' => 'sbo', 'SalBow7G2123' => 'sbo', 'SalBow7G2285' => 'sbo', 'SalBow7G3537' => 'sbo', 'SalBow8G2947' => 'sbo', 'SalBow8G4463' => 'sbo', 'SalBow8G5466' => 'sbo', 'Sc01g0001750' => 'sci', 'Sc02g0006640' => 'sci', 'Sc02g0006670' => 'sci', 'Sc04g0008220' => 'sci', 'Sc05g0006190' => 'sci', 'Sc08g0002760' => 'sci', 'Sc17g0006170' => 'sci', 'Sc22g0002050' => 'sci', 'Sc23g0001190' => 'sci', 'Sc24g0000980' => 'sci', 'Sed0006245' => 'sed', 'Sed0007543' => 'sed', 'Sed0009411' => 'sed', 'Sed0010765' => 'sed', 'Sed0012944' => 'sed', 'Sed0014682' => 'sed', 'Sed0016174' => 'sed', 'Sed0016796' => 'sed', 'Sed0020317' => 'sed', 'Sed0021467' => 'sed', 'SEGI_01316' => 'sgi', 'SEGI_03374' => 'sgi', 'SEGI_16265' => 'sgi', 'SEGI_18569' => 'sgi', 'SEGI_20351' => 'sgi', 'SEGI_26395' => 'sgi', 'SEGI_29469' => 'sgi', 'SEGI_34771' => 'sgi', 'SEGI_36769' => 'sgi', 'SEGI_37139' => 'sgi', 'SGA_v2.0_scaffold100G29687' => 'sas', 'SGA_v2.0_scaffold118G32472' => 'sas', 'SGA_v2.0_scaffold14G07051' => 'sas', 'SGA_v2.0_scaffold183G39845' => 'sas', 'SGA_v2.0_scaffold1G00174' => 'sas', 'SGA_v2.0_scaffold22G09714' => 'sas', 'SGA_v2.0_scaffold333G48992' => 'sas', 'SGA_v2.0_scaffold46G17491' => 'sas', 'SGA_v2.0_scaffold49G18294' => 'sas', 'SGA_v2.0_scaffold63G21658' => 'sas', 'SHI01741' => 'shi', 'SHI05771' => 'shi', 'SHI18077' => 'shi', 'SHI20525' => 'shi', 'SHI20527' => 'shi', 'SHI20528' => 'shi', 'SMO172G0185' => 'smo', 'SMO198G0020' => 'smo', 'SMO351G0006' => 'smo', 'SMO356G0118' => 'smo', 'SMO358G0296' => 'smo', 'SMO367G0079' => 'smo', 'SMO367G1277' => 'smo', 'Solyc01g014220.3' => 'sly', 'Solyc01g111770.2' => 'sly', 'Solyc02g078180.3' => 'sly', 'Solyc03g006430.3' => 'sly', 'Solyc03g006456.1' => 'sly', 'Solyc03g079860.2' => 'sly', 'Solyc04g079770.3' => 'sly', 'Solyc05g007430.4' => 'sly', 'Solyc07g063150.3' => 'sly', 'Solyc08g016620.3' => 'sly', 'Solyc09g057590.3' => 'sly', 'Solyc09g057600.1' => 'sly', 'Solyc10g009050.3' => 'sly', 'Solyc11g017420.2' => 'sly', 'Sopen01g053810' => 'spe', 'Sopen02g023040' => 'spe', 'Sopen03g002440' => 'spe', 'Sopen04g033350' => 'spe', 'Sopen05g003310' => 'spe', 'Sopen07g004050' => 'spe', 'Sopen07g031340' => 'spe', 'Sopen08g006990' => 'spe', 'Sopen10g004830' => 'spe', 'Sopen11g009370' => 'spe', 'Sp1g24450' => 'spa', 'Sp1g29670' => 'spa', 'Sp1g39600' => 'spa', 'Sp2g11080' => 'spa', 'Sp2g13970' => 'spa', 'Sp4g16130' => 'spa', 'Sp6g13080' => 'spa', 'Sp7g37270' => 'spa', 'TAR371G0065' => 'tar', 'TAR376G0340' => 'tar', 'TAR376G0435' => 'tar', 'TAR381G0002' => 'tar', 'TAR381G1236' => 'tar', 'TAR624G0055' => 'tar', 'TAR624G0324' => 'tar', 'TAR624G0696' => 'tar', 'TAR624G0906' => 'tar', 'TAR625G0107' => 'tar', 'TAR626G0015' => 'tar', 'TAR626G1356' => 'tar', 'TAR627G0888' => 'tar', 'TAR628G0399' => 'tar', 'TAR628G1327' => 'tar', 'TAR629G2831' => 'tar', 'TAR629G2874' => 'tar', 'TAR633G1432' => 'tar', 'TAR633G2771' => 'tar', 'THA.LOC104803394' => 'tha', 'THA.LOC104805153' => 'tha', 'THA.LOC104806784' => 'tha', 'THA.LOC104810473' => 'tha', 'THA.LOC104813100' => 'tha', 'THA.LOC104814215' => 'tha', 'THA.LOC104815554' => 'tha', 'THA.LOC104820544' => 'tha', 'THA.LOC104824754' => 'tha', 'THA.LOC104827717' => 'tha', 'Thecc.02G031400' => 'tca', 'Thecc.02G055900' => 'tca', 'Thecc.02G350800' => 'tca', 'Thecc.06G150900' => 'tca', 'Thecc.06G186600' => 'tca', 'Thecc.07G089600' => 'tca', 'Thecc.08G020400' => 'tca', 'Thecc.08G182100' => 'tca', 'Thhalv10000873m.g' => 'esa', 'Thhalv10004185m.g' => 'esa', 'Thhalv10006981m.g' => 'esa', 'Thhalv10007204m.g' => 'esa', 'Thhalv10011374m.g' => 'esa', 'Thhalv10013482m.g' => 'esa', 'Thhalv10017801m.g' => 'esa', 'Thhalv10024983m.g' => 'esa', 'TPR.G12072' => 'tpr', 'TPR.G15769' => 'tpr', 'TPR.G16504' => 'tpr', 'TPR.G16506' => 'tpr', 'TPR.G24345' => 'tpr', 'TPR.G26666' => 'tpr', 'TPR.G27320' => 'tpr', 'TPR.G31819' => 'tpr', 'TPR.G38879' => 'tpr', 'TPR.G39015' => 'tpr', 'TPR.G8819' => 'tpr', 'TWI09G0924' => 'twi', 'TWI12G0811' => 'twi', 'TWI12G1294' => 'twi', 'TWI31G0150' => 'twi', 'TWI36G1262' => 'twi', 'TWI38G1287' => 'twi', 'TWI38G1633' => 'twi', 'TWI38G1982' => 'twi', 'TWI39G0116' => 'twi', 'TWI60G1011' => 'twi', 'TWI63G0171' => 'twi', 'TWI73G0839' => 'twi', 'TWI79G1511' => 'twi', 'unitig_0.g915' => 'ugi', 'unitig_0.g916' => 'ugi', 'unitig_21.g20219' => 'ugi', 'unitig_21.g20416' => 'ugi', 'unitig_578.g16132' => 'ugi', 'unitig_578.g16718' => 'ugi', 'unitig_62.g23481' => 'ugi', 'unitig_744.g24535' => 'ugi', 'unitig_749.g13525' => 'ugi', 'vmacro01248' => 'vma', 'vmacro02290' => 'vma', 'vmacro10946' => 'vma', 'vmacro11865' => 'vma', 'vmacro12493' => 'vma', 'vmacro17322' => 'vma', 'vmacro21599' => 'vma', 'vmacro23041' => 'vma', 'VMungo0251G0004' => 'vmu', 'VMungo0251G2639' => 'vmu', 'VMungo0251G2967' => 'vmu', 'VMungo0540G0864' => 'vmu', 'VMungo0540G1569' => 'vmu', 'VMungo0647G0317' => 'vmu', 'VMungo0720G1373' => 'vmu', 'VMungo0720G1508' => 'vmu', 'VMungo1080G0485' => 'vmu', 'VMungo1215G3177' => 'vmu', 'Zm00001eb112600' => 'zma', 'Zm00001eb120220' => 'zma', 'Zm00001eb153240' => 'zma', 'Zm00001eb168880' => 'zma', 'Zm00001eb213920' => 'zma', 'Zm00001eb228280' => 'zma', 'Zm00001eb254580' => 'zma', 'Zm00001eb272180' => 'zma', 'Zm00001eb293190' => 'zma', 'Zm00001eb322930' => 'zma', 'Zm00001eb353360' => 'zma', 'Zm00001eb353390' => 'zma', 'Zm00001eb353430' => 'zma', 'Zm00001eb353440' => 'zma', 'Zm00001eb353780' => 'zma' ), 'gf_id' => 'HOM05D000499', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000499' ), 'data_identifier' => 'HOM05D000499', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000499', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1066', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p29780' => 'bna', 'A02p33180' => 'bna', 'A03p16470' => 'bna', 'A03p66010' => 'bna', 'A04p25970' => 'bna', 'A06p01270' => 'bna', 'A06p46080' => 'bna', 'A07p11400' => 'bna', 'A08p01840' => 'bna', 'A08p08230' => 'bna', 'A08p25740' => 'bna', 'A09p32070' => 'bna', 'A09p37830' => 'bna', 'A09p42840' => 'bna', 'A09p42850' => 'bna', 'Aa31LG10G2060' => 'aar', 'Aa31LG2G7410' => 'aar', 'Aa31LG6G10200' => 'aar', 'Aa31LG6G16680' => 'aar', 'Aa31LG6G8470' => 'aar', 'Aa31LG9G12730' => 'aar', 'Aa31LG9G13680' => 'aar', 'Aa31LG9G14920' => 'aar', 'Aa31LG9G6650' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4977' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5467' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3254' => 'aag', 'Actinidia02578' => 'ach', 'Actinidia07693' => 'ach', 'Actinidia08413' => 'ach', 'Actinidia08414' => 'ach', 'Actinidia15289' => 'ach', 'Actinidia19871' => 'ach', 'Actinidia21475' => 'ach', 'Actinidia22576' => 'ach', 'Actinidia28327' => 'ach', 'Actinidia32491' => 'ach', 'Actinidia39463' => 'ach', 'Actinidia39571' => 'ach', 'Ah.01g013750' => 'amhyb', 'Ah.01g023210' => 'amhyb', 'Ah.04g164850' => 'amhyb', 'Ah.05g178060' => 'amhyb', 'Ah.07g204270' => 'amhyb', 'Ah.07g208480' => 'amhyb', 'Ah.09g237410' => 'amhyb', 'Ah.14g089460' => 'amhyb', 'AL1G41790' => 'aly', 'AL1G49050' => 'aly', 'AL1G53810' => 'aly', 'AL1G61400' => 'aly', 'AL4G18580' => 'aly', 'AL5G12510' => 'aly', 'AL5G12540' => 'aly', 'AL6G43230' => 'aly', 'AL7G10370' => 'aly', 'AL7G19250' => 'aly', 'AL8G12240' => 'aly', 'AL8G18540' => 'aly', 'Aqoxy1G02409' => 'aox', 'Aqoxy2G03993' => 'aox', 'Aqoxy3G03357' => 'aox', 'Aqoxy4G00785' => 'aox', 'Aqoxy5G02598' => 'aox', 'Aqoxy6G00132' => 'aox', 'Aqoxy7G01776' => 'aox', 'Aqoxy7G02316' => 'aox', 'Aqoxy7G03973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.12AFKW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B8730' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27IQR1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3F75VG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3RE0GA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41TCQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.527VTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FIR39' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5W8UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DA38EV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ63HS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H1I32C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HC27T5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4M8AP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7N3CZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9UVDZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LS1NQA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT1D4B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SKC4TM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCFV76' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF9Q1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQWD9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1ZM88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WE07RT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YCK7VH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJE6Q6' => 'arhy', 'AT1G28240' => 'ath', 'AT1G34550' => 'ath', 'AT1G53040' => 'ath', 'AT2G02910' => 'ath', 'AT4G09630' => 'ath', 'AT4G38500' => 'ath', 'AT5G42660' => 'ath', 'AT5G46220' => 'ath', 'ATR0152G026' => 'atr', 'ATR0564G343' => 'atr', 'ATR0706G151' => 'atr', 'ATR0733G207' => 'atr', 'ATR0751G234' => 'atr', 'ATR0807G048' => 'atr', 'ATR1091G084' => 'atr', 'Atru.chr10.1229' => 'acertr', 'Atru.chr10.1230' => 'acertr', 'Atru.chr10.1874' => 'acertr', 'Atru.chr11.1808' => 'acertr', 'Atru.chr13.1795' => 'acertr', 'Atru.chr13.570' => 'acertr', 'Atru.chr2.2608' => 'acertr', 'Atru.chr2.2609' => 'acertr', 'Atru.chr5.3428' => 'acertr', 'Atru.chr8.1171' => 'acertr', 'AUR62004651' => 'cqu', 'AUR62008675' => 'cqu', 'AUR62010014' => 'cqu', 'AUR62013004' => 'cqu', 'AUR62014825' => 'cqu', 'AUR62015015' => 'cqu', 'AUR62015151' => 'cqu', 'AUR62017020' => 'cqu', 'AUR62019422' => 'cqu', 'AUR62023570' => 'cqu', 'AUR62025571' => 'cqu', 'AUR62029098' => 'cqu', 'AUR62033863' => 'cqu', 'AUR62034296' => 'cqu', 'AUR62040075' => 'cqu', 'BcaB02g07334' => 'bca', 'BcaB02g10575' => 'bca', 'BcaB03g12119' => 'bca', 'BcaB03g12120' => 'bca', 'BcaB03g13945' => 'bca', 'BcaB04g17123' => 'bca', 'BcaB04g17867' => 'bca', 'BcaB04g19839' => 'bca', 'BcaB07g30317' => 'bca', 'BcaB07g32432' => 'bca', 'BcaB07g33362' => 'bca', 'BcaB08g36611' => 'bca', 'BcaC01g00028' => 'bca', 'BcaC01g01356' => 'bca', 'BcaC01g02034' => 'bca', 'BcaC01g06051' => 'bca', 'BcaC03g16839' => 'bca', 'BcaC03g17176' => 'bca', 'BcaC05g26829' => 'bca', 'BcaC06g31490' => 'bca', 'BcaC06g35344' => 'bca', 'BcaC06g36570' => 'bca', 'BcaC07g37537' => 'bca', 'BcaC08g43491' => 'bca', 'BcaC08g43773' => 'bca', 'BcaNung00234' => 'bca', 'BcaNung01982' => 'bca', 'BcaNung03707' => 'bca', 'BcaNung06454' => 'bca', 'BolC2t10762H' => 'bol', 'BolC2t11191H' => 'bol', 'BolC3t14322H' => 'bol', 'BolC3t19747H' => 'bol', 'BolC3t21425H' => 'bol', 'BolC4t27800H' => 'bol', 'BolC5t31423H' => 'bol', 'BolC6t35951H' => 'bol', 'BolC6t36282H' => 'bol', 'BolC7t40678H' => 'bol', 'BolC7t40679H' => 'bol', 'BolC7t42222H' => 'bol', 'BolC7t43492H' => 'bol', 'BolC7t46785H' => 'bol', 'BolC8t47853H' => 'bol', 'BolC9t56805H' => 'bol', 'BraA02t08000Z' => 'bra', 'BraA02t08341Z' => 'bra', 'BraA03t10936Z' => 'bra', 'BraA03t15657Z' => 'bra', 'BraA04t18100Z' => 'bra', 'BraA05t20523Z' => 'bra', 'BraA06t23353Z' => 'bra', 'BraA06t27473Z' => 'bra', 'BraA06t27769Z' => 'bra', 'BraA07t28928Z' => 'bra', 'BraA08t32236Z' => 'bra', 'BraA08t32841Z' => 'bra', 'BraA08t34524Z' => 'bra', 'BraA09t38742Z' => 'bra', 'BraA09t39295Z' => 'bra', 'C02p47180' => 'bna', 'C02p50990' => 'bna', 'C03p19360' => 'bna', 'C03p74950' => 'bna', 'C03p91000' => 'bna', 'C04p63260' => 'bna', 'C05p27050' => 'bna', 'C06p08750' => 'bna', 'C06p11490' => 'bna', 'C07p02820' => 'bna', 'C07p17180' => 'bna', 'C07p29440' => 'bna', 'C07p63730' => 'bna', 'C09p39260' => 'bna', 'CAN.G1164.34' => 'can', 'CAN.G1164.39' => 'can', 'CAN.G1530.3' => 'can', 'CAN.G162.61' => 'can', 'CAN.G176.6' => 'can', 'CAN.G289.49' => 'can', 'CAN.G370.21' => 'can', 'CAN.G370.22' => 'can', 'CAN.G371.117' => 'can', 'CAN.G58.37' => 'can', 'CAN.G588.98' => 'can', 'CANSAT21G2266' => 'cansat', 'CANSAT25G2799' => 'cansat', 'CANSAT35G0862' => 'cansat', 'CANSAT35G1704' => 'cansat', 'CANSAT35G1760' => 'cansat', 'CANSAT56G3971' => 'cansat', 'CANSAT56G4116' => 'cansat', 'CANSAT80G1259' => 'cansat', 'CARHR027730' => 'chi', 'CARHR033880' => 'chi', 'CARHR043270' => 'chi', 'CARHR145330' => 'chi', 'CARHR145340' => 'chi', 'CARHR175570' => 'chi', 'CARHR181570' => 'chi', 'CARHR258470' => 'chi', 'CARHR260490' => 'chi', 'CARHR294220' => 'chi', 'Carub.0001s2668' => 'cru', 'Carub.0001s3257' => 'cru', 'Carub.0001s4220' => 'cru', 'Carub.0005s0179' => 'cru', 'Carub.0006s2807' => 'cru', 'Carub.0007s0039' => 'cru', 'Carub.0008s0169' => 'cru', 'Carub.0008s0636' => 'cru', 'Ca_00338_v3' => 'car', 'Ca_00542_v3' => 'car', 'Ca_01844_v3' => 'car', 'Ca_10611_v3' => 'car', 'Ca_13326_v3' => 'car', 'Ca_17944_v3' => 'car', 'Ca_18546_v3' => 'car', 'Ca_24219_v3' => 'car', 'Ca_29972_v3' => 'car', 'CBR_g3681' => 'cbr', 'CBR_g40021' => 'cbr', 'Cc01_g08140' => 'ccan', 'Cc02_g13410' => 'ccan', 'Cc02_g37480' => 'ccan', 'Cc05_g12030' => 'ccan', 'Cc09_g03370' => 'ccan', 'Cc09_g10300' => 'ccan', 'Cc10_g03530' => 'ccan', 'Cc10_g11380' => 'ccan', 'CDE01G0176' => 'cde', 'CDE02G0675' => 'cde', 'CDE02G0942' => 'cde', 'CDE02G1153' => 'cde', 'CDE02G4177' => 'cde', 'CDE04G2117' => 'cde', 'CDE04G2736' => 'cde', 'CDE08G1161' => 'cde', 'CDE09G1238' => 'cde', 'Cfa000467' => 'cfa', 'Cfa000947' => 'cfa', 'Cfa004969' => 'cfa', 'Cfa005284' => 'cfa', 'Cfa008993' => 'cfa', 'Cfa018187' => 'cfa', 'Cfa018454' => 'cfa', 'Cfa020585' => 'cfa', 'Ciclev10000424m.g' => 'ccl', 'Ciclev10003605m.g' => 'ccl', 'Ciclev10007828m.g' => 'ccl', 'Ciclev10014620m.g' => 'ccl', 'Ciclev10015169m.g' => 'ccl', 'Ciclev10018291m.g' => 'ccl', 'Ciclev10028256m.g' => 'ccl', 'Ciclev10033822m.g' => 'ccl', 'CiPaw.05G060300' => 'cil', 'CiPaw.05G085000' => 'cil', 'CiPaw.06G083700' => 'cil', 'CiPaw.06G120300' => 'cil', 'CiPaw.09G060500' => 'cil', 'CiPaw.09G123800' => 'cil', 'CiPaw.11G169700' => 'cil', 'CiPaw.12G118300' => 'cil', 'CiPaw.15G071000' => 'cil', 'CiPaw.15G081900' => 'cil', 'ClCG01G024610' => 'cla', 'ClCG03G006070' => 'cla', 'ClCG05G019250' => 'cla', 'ClCG09G009500' => 'cla', 'ClCG11G008200' => 'cla', 'ClCG11G018080' => 'cla', 'COL.COLO4_17373' => 'col', 'COL.COLO4_22994' => 'col', 'COL.COLO4_26389' => 'col', 'COL.COLO4_27170' => 'col', 'COL.COLO4_31074' => 'col', 'COL.COLO4_31465' => 'col', 'COL.COLO4_36438' => 'col', 'COL.COLO4_36439' => 'col', 'Cpa.g.c38781' => 'cpa', 'Cpa.g.sc128.12' => 'cpa', 'Cpa.g.sc166.7' => 'cpa', 'Cpa.g.sc166.8' => 'cpa', 'Cpa.g.sc20.111' => 'cpa', 'Cpa.g.sc27.31' => 'cpa', 'Cpa.g.sc64.36' => 'cpa', 'Cpa.g.sc64.37' => 'cpa', 'Cpa.g.sc66.49' => 'cpa', 'Cpa.g.sc80.64' => 'cpa', 'CsaV3_1G012320' => 'csa', 'CsaV3_2G008480' => 'csa', 'CsaV3_2G033450' => 'csa', 'CsaV3_3G044830' => 'csa', 'CsaV3_4G033710' => 'csa', 'CsaV3_6G051730' => 'csa', 'CsaV3_7G025350' => 'csa', 'CSS0001067' => 'camsi', 'CSS0005996' => 'camsi', 'CSS0006590' => 'camsi', 'CSS0009673' => 'camsi', 'CSS0010201' => 'camsi', 'CSS0010549' => 'camsi', 'CSS0011364' => 'camsi', 'CSS0014473' => 'camsi', 'CSS0014961' => 'camsi', 'CSS0020191' => 'camsi', 'CSS0021165' => 'camsi', 'CSS0022306' => 'camsi', 'CSS0030591' => 'camsi', 'CSS0030696' => 'camsi', 'CSS0032653' => 'camsi', 'CSS0037487' => 'camsi', 'CSS0041102' => 'camsi', 'CSS0041261' => 'camsi', 'CSS0046246' => 'camsi', 'CSS0049256' => 'camsi', 'DCAR_004075' => 'dca', 'DCAR_011538' => 'dca', 'DCAR_019553' => 'dca', 'DCAR_020952' => 'dca', 'DCAR_021739' => 'dca', 'DCAR_027407' => 'dca', 'DCAR_027913' => 'dca', 'DCAR_028066' => 'dca', 'Dinv05899' => 'din', 'Dinv07563' => 'din', 'Dinv08010' => 'din', 'Dinv14125' => 'din', 'Dinv20172' => 'din', 'Dinv30743' => 'din', 'Dinv31229' => 'din', 'Dinv34162' => 'din', 'Dinv36028' => 'din', 'Dinv39368' => 'din', 'Dinv40565' => 'din', 'Dinv41706' => 'din', 'Duzib052G0089' => 'dzi', 'Duzib116G0641' => 'dzi', 'Duzib132G0069' => 'dzi', 'Duzib132G1219' => 'dzi', 'Duzib147G0278' => 'dzi', 'Duzib160G0480' => 'dzi', 'Duzib170G0661' => 'dzi', 'Duzib177G0591' => 'dzi', 'Duzib187G1353' => 'dzi', 'Duzib192G0858' => 'dzi', 'Duzib192G0883' => 'dzi', 'Duzib213G0506' => 'dzi', 'Duzib235G0289' => 'dzi', 'Duzib251G0422' => 'dzi', 'ECA232G3898' => 'eca', 'ECA233G5950' => 'eca', 'ECA234G1699' => 'eca', 'ECA234G2421' => 'eca', 'ECA236G0426' => 'eca', 'ECA236G4331' => 'eca', 'ECA248G2573' => 'eca', 'EL10Ac1g00077' => 'bvu', 'EL10Ac1g01746' => 'bvu', 'EL10Ac2g03464' => 'bvu', 'EL10Ac4g08176' => 'bvu', 'EL10Ac7g17521' => 'bvu', 'EL10Ac8g20386' => 'bvu', 'EL10Ac9g21343' => 'bvu', 'EL10Ac9g22688' => 'bvu', 'Eucgr.B03434' => 'egr', 'Eucgr.D00618' => 'egr', 'Eucgr.E02395' => 'egr', 'Eucgr.F01129' => 'egr', 'Eucgr.F02622' => 'egr', 'Eucgr.F04207' => 'egr', 'FAN01G0570' => 'fan', 'FAN03G3351' => 'fan', 'FAN06G3702' => 'fan', 'FAN07G2149' => 'fan', 'FAN10G3758' => 'fan', 'FAN11G1170' => 'fan', 'FAN11G2050' => 'fan', 'FAN11G2724' => 'fan', 'FAN12G1700' => 'fan', 'FAN12G2028' => 'fan', 'FAN15G1160' => 'fan', 'FAN15G3063' => 'fan', 'FAN16G2540' => 'fan', 'FAN16G3077' => 'fan', 'FAN16G3624' => 'fan', 'FAN17G0221' => 'fan', 'FAN20G2492' => 'fan', 'FAN20G2905' => 'fan', 'FAN21G0548' => 'fan', 'FAN21G1300' => 'fan', 'FAN22G0077' => 'fan', 'FAN22G1315' => 'fan', 'FAN24G1280' => 'fan', 'FAN24G1445' => 'fan', 'FAN24G3527' => 'fan', 'FAN25G0464' => 'fan', 'FAN25G2885' => 'fan', 'FAN25G3270' => 'fan', 'FAN27G1101' => 'fan', 'FAN27G2846' => 'fan', 'FAN27G3524' => 'fan', 'FvH4_2g11770' => 'fve', 'FvH4_2g15630' => 'fve', 'FvH4_3g05570' => 'fve', 'FvH4_3g09110' => 'fve', 'FvH4_3g19940' => 'fve', 'FvH4_4g04821' => 'fve', 'FvH4_4g31480' => 'fve', 'FvH4_7g01740' => 'fve', 'Glyma.05G130400' => 'gma', 'Glyma.05G156400' => 'gma', 'Glyma.07G197000' => 'gma', 'Glyma.08G085151' => 'gma', 'Glyma.08G114500' => 'gma', 'Glyma.08G300400' => 'gma', 'Glyma.10G215800' => 'gma', 'Glyma.12G224400' => 'gma', 'Glyma.13G179300' => 'gma', 'Glyma.13G218151' => 'gma', 'Glyma.13G238800' => 'gma', 'Glyma.13G276900' => 'gma', 'Glyma.14G078200' => 'gma', 'Glyma.15G074500' => 'gma', 'Glyma.15G094100' => 'gma', 'Glyma.17G247200' => 'gma', 'Glyma.18G120100' => 'gma', 'Glyma.20G176000' => 'gma', 'Gohir.A01G063600' => 'ghi', 'Gohir.A01G170301' => 'ghi', 'Gohir.A02G060500' => 'ghi', 'Gohir.A05G133850' => 'ghi', 'Gohir.A05G161400' => 'ghi', 'Gohir.A06G012900' => 'ghi', 'Gohir.A06G035901' => 'ghi', 'Gohir.A06G127100' => 'ghi', 'Gohir.A06G210500' => 'ghi', 'Gohir.A08G008650' => 'ghi', 'Gohir.A09G072700' => 'ghi', 'Gohir.A09G088301' => 'ghi', 'Gohir.A10G040600' => 'ghi', 'Gohir.A12G036300' => 'ghi', 'Gohir.A12G143350' => 'ghi', 'Gohir.A12G165500' => 'ghi', 'Gohir.A13G145700' => 'ghi', 'Gohir.D01G050000' => 'ghi', 'Gohir.D01G051366' => 'ghi', 'Gohir.D01G161350' => 'ghi', 'Gohir.D02G065900' => 'ghi', 'Gohir.D05G164200' => 'ghi', 'Gohir.D05G355500' => 'ghi', 'Gohir.D06G010400' => 'ghi', 'Gohir.D06G111250' => 'ghi', 'Gohir.D06G132000' => 'ghi', 'Gohir.D06G210500' => 'ghi', 'Gohir.D07G165675' => 'ghi', 'Gohir.D08G062240' => 'ghi', 'Gohir.D08G086101' => 'ghi', 'Gohir.D08G138060' => 'ghi', 'Gohir.D09G072300' => 'ghi', 'Gohir.D10G041400' => 'ghi', 'Gohir.D11G191020' => 'ghi', 'Gohir.D11G212066' => 'ghi', 'Gohir.D12G036300' => 'ghi', 'Gohir.D12G168600' => 'ghi', 'Gohir.D13G150600' => 'ghi', 'Gorai.001G057300' => 'gra', 'Gorai.002G069900' => 'gra', 'Gorai.002G200000' => 'gra', 'Gorai.003G067600' => 'gra', 'Gorai.005G074800' => 'gra', 'Gorai.006G087300' => 'gra', 'Gorai.008G037500' => 'gra', 'Gorai.008G181400' => 'gra', 'Gorai.009G169400' => 'gra', 'Gorai.009G387900' => 'gra', 'Gorai.010G013300' => 'gra', 'Gorai.010G153800' => 'gra', 'Gorai.010G255800' => 'gra', 'Gorai.011G043700' => 'gra', 'Gorai.011G198900' => 'gra', 'Gorai.013G168400' => 'gra', 'GSVIVG01005212001' => 'vvi', 'GSVIVG01006163001' => 'vvi', 'GSVIVG01009625001' => 'vvi', 'GSVIVG01014338001' => 'vvi', 'GSVIVG01020005001' => 'vvi', 'GSVIVG01021450001' => 'vvi', 'GSVIVG01023975001' => 'vvi', 'GSVIVG01034490001' => 'vvi', 'HanXRQChr04g0112071' => 'han', 'HanXRQChr05g0131151' => 'han', 'HanXRQChr09g0262371' => 'han', 'HanXRQChr09g0268401' => 'han', 'HanXRQChr10g0279241' => 'han', 'HanXRQChr10g0297961' => 'han', 'HanXRQChr11g0326231' => 'han', 'HanXRQChr11g0328471' => 'han', 'HanXRQChr16g0507941' => 'han', 'HanXRQChr17g0560211' => 'han', 'Haze_02108' => 'cav', 'Haze_02428' => 'cav', 'Haze_05593' => 'cav', 'Haze_06448' => 'cav', 'Haze_09427' => 'cav', 'Haze_12022' => 'cav', 'Haze_17612' => 'cav', 'Haze_17928' => 'cav', 'Hma1.2p1_0032F.1_g019250' => 'hma', 'Hma1.2p1_0163F.1_g072690' => 'hma', 'Hma1.2p1_0265F.1_g106710' => 'hma', 'Hma1.2p1_0286F.1_g113970' => 'hma', 'Hma1.2p1_0363F.1_g136640' => 'hma', 'Hma1.2p1_0584F.1_g183470' => 'hma', 'Hma1.2p1_0885F.1_g232570' => 'hma', 'HPP92_006022' => 'vpl', 'HPP92_007320' => 'vpl', 'HPP92_011521' => 'vpl', 'HPP92_019387' => 'vpl', 'HPP92_024038' => 'vpl', 'Hund05891' => 'sun', 'Hund06450' => 'sun', 'Hund12053' => 'sun', 'Hund16800' => 'sun', 'Hund21222' => 'sun', 'Hund22896' => 'sun', 'Hund23746' => 'sun', 'Hund27083' => 'sun', 'Lalb_Chr02g0141831' => 'lal', 'Lalb_Chr02g0141841' => 'lal', 'Lalb_Chr05g0220411' => 'lal', 'Lalb_Chr06g0162081' => 'lal', 'Lalb_Chr09g0327651' => 'lal', 'Lalb_Chr13g0295051' => 'lal', 'Lalb_Chr15g0086801' => 'lal', 'Lalb_Chr16g0383781' => 'lal', 'Lalb_Chr16g0383791' => 'lal', 'Lalb_Chr18g0055441' => 'lal', 'Lalb_Chr18g0059611' => 'lal', 'Lalb_Chr20g0109661' => 'lal', 'Lalb_Chr20g0109831' => 'lal', 'Lalb_Chr20g0121871' => 'lal', 'Lalb_Chr22g0355361' => 'lal', 'Lalb_Chr25g0286371' => 'lal', 'Lj1A1187G43' => 'lonja', 'Lj1A1205T50' => 'lonja', 'Lj1A800G33' => 'lonja', 'Lj1C1187T7' => 'lonja', 'Lj1C843T11' => 'lonja', 'Lj1g0010940' => 'lja', 'Lj2A288T69' => 'lonja', 'Lj3g0024276' => 'lja', 'Lj4A47T76' => 'lonja', 'Lj4g0005805' => 'lja', 'Lj4g0006097' => 'lja', 'Lj4g0008528' => 'lja', 'Lj4g0024907' => 'lja', 'Lj5g0012472' => 'lja', 'Lj5g0018648' => 'lja', 'Lj6C789G1' => 'lonja', 'Lj6g0004000' => 'lja', 'Lj7A292G67' => 'lonja', 'Lj7A292T64' => 'lonja', 'Lj9A400T58' => 'lonja', 'Lsat_1_v5_gn_1_126181' => 'lsa', 'Lsat_1_v5_gn_4_123041' => 'lsa', 'Lsat_1_v5_gn_4_133620' => 'lsa', 'Lsat_1_v5_gn_4_53221' => 'lsa', 'Lsat_1_v5_gn_4_71961' => 'lsa', 'Lsat_1_v5_gn_7_105241' => 'lsa', 'Lsat_1_v5_gn_7_21361' => 'lsa', 'Lsat_1_v5_gn_7_28860' => 'lsa', 'Lsat_1_v5_gn_7_31260' => 'lsa', 'Lsat_1_v5_gn_8_52801' => 'lsa', 'Manes.02G191400' => 'mes', 'Manes.03G110100' => 'mes', 'Manes.04G071100' => 'mes', 'Manes.05G100500' => 'mes', 'Manes.05G164700' => 'mes', 'Manes.15G087000' => 'mes', 'Manes.15G121500' => 'mes', 'Manes.16G028300' => 'mes', 'Manes.17G046100' => 'mes', 'Manes.17G069800' => 'mes', 'Manes.18G100500' => 'mes', 'Mapoly0002s0109' => 'mpo', 'Mapoly0024s0007' => 'mpo', 'Mapoly0089s0032' => 'mpo', 'MBI04_g42241_MAGBIO' => 'mbi', 'MBI05_g11988_MAGBIO' => 'mbi', 'MBI05_g35452_MAGBIO' => 'mbi', 'MBI07_g30179_MAGBIO' => 'mbi', 'MBI07_g35859_MAGBIO' => 'mbi', 'MBI07_g35860_MAGBIO' => 'mbi', 'MBI07_g37166_MAGBIO' => 'mbi', 'MBI08_g18172_MAGBIO' => 'mbi', 'MBI09_g08441_MAGBIO' => 'mbi', 'MBI13_g01676_MAGBIO' => 'mbi', 'MBI14_g42955_MAGBIO' => 'mbi', 'MBI16_g13161_MAGBIO' => 'mbi', 'MBI17_g27204_MAGBIO' => 'mbi', 'MBI19_g21595_MAGBIO' => 'mbi', 'MD00G1148400' => 'mdo', 'MD02G1301200' => 'mdo', 'MD03G1227800' => 'mdo', 'MD05G1041100' => 'mdo', 'MD05G1124800' => 'mdo', 'MD05G1284000' => 'mdo', 'MD05G1338800' => 'mdo', 'MD05G1338900' => 'mdo', 'MD07G1022800' => 'mdo', 'MD10G1047500' => 'mdo', 'MD10G1127500' => 'mdo', 'MD10G1262300' => 'mdo', 'MD10G1293800' => 'mdo', 'MD16G1074300' => 'mdo', 'Medtr1g021670' => 'mtr', 'Medtr1g096320' => 'mtr', 'Medtr2g013690' => 'mtr', 'Medtr2g019450' => 'mtr', 'Medtr2g085170' => 'mtr', 'Medtr4g088785' => 'mtr', 'Medtr8g055930' => 'mtr', 'Medtr8g085850' => 'mtr', 'MELO3C002605.2' => 'cme', 'MELO3C003891.2' => 'cme', 'MELO3C004012.2' => 'cme', 'MELO3C007134.2' => 'cme', 'MELO3C008118.2' => 'cme', 'MELO3C016700.2' => 'cme', 'MELO3C024127.2' => 'cme', 'MELO3C033361.2' => 'cme', 'MELO3C033362.2' => 'cme', 'Migut.C00430' => 'egut', 'Migut.C01246' => 'egut', 'Migut.E00101' => 'egut', 'Migut.H01486' => 'egut', 'Migut.H01939' => 'egut', 'Migut.K00360' => 'egut', 'Migut.M00910' => 'egut', 'Migut.M01139' => 'egut', 'Migut.N02677' => 'egut', 'MSTRG.13252' => 'ama', 'MSTRG.14701' => 'ama', 'MSTRG.1521' => 'ama', 'MSTRG.15884' => 'ama', 'MSTRG.16242' => 'ama', 'MSTRG.22285' => 'ama', 'MSTRG.22444' => 'ama', 'MSTRG.2349' => 'ama', 'MSTRG.26308' => 'ama', 'MSTRG.28296' => 'ama', 'MSTRG.9895' => 'ama', 'Nitab4.5_0000110g0060' => 'nta', 'Nitab4.5_0000420g0130' => 'nta', 'Nitab4.5_0000422g0030' => 'nta', 'Nitab4.5_0000560g0180' => 'nta', 'Nitab4.5_0000703g0100' => 'nta', 'Nitab4.5_0000786g0200' => 'nta', 'Nitab4.5_0001336g0020' => 'nta', 'Nitab4.5_0001796g0030' => 'nta', 'Nitab4.5_0003348g0060' => 'nta', 'Nitab4.5_0003698g0040' => 'nta', 'Nitab4.5_0003942g0090' => 'nta', 'Nitab4.5_0004775g0070' => 'nta', 'Nitab4.5_0004864g0030' => 'nta', 'Nitab4.5_0005615g0020' => 'nta', 'Nitab4.5_0009288g0030' => 'nta', 'Nitab4.5_0009341g0010' => 'nta', 'Nitab4.5_0009535g0010' => 'nta', 'Nn1g03995' => 'nnu', 'Nn1g04100' => 'nnu', 'Nn1g06530' => 'nnu', 'Nn3g16404' => 'nnu', 'Nn3g17212' => 'nnu', 'Nn3g20776' => 'nnu', 'Nn3g21923' => 'nnu', 'Nn5g27737' => 'nnu', 'Nn5g29461' => 'nnu', 'Nn7g38355' => 'nnu', 'Nn8g39873' => 'nnu', 'Oeu000548.2' => 'oeu', 'Oeu004672.1' => 'oeu', 'Oeu015605.2' => 'oeu', 'Oeu016092.1' => 'oeu', 'Oeu017879.3' => 'oeu', 'Oeu024910.1' => 'oeu', 'Oeu028965.1' => 'oeu', 'Oeu031269.1' => 'oeu', 'Oeu031270.1' => 'oeu', 'Oeu032535.1' => 'oeu', 'Oeu034151.1' => 'oeu', 'Oeu034152.1' => 'oeu', 'Oeu034588.2' => 'oeu', 'Oeu050846.1' => 'oeu', 'Oeu050849.2' => 'oeu', 'Oeu051063.2' => 'oeu', 'Oeu052368.1' => 'oeu', 'Oeu052370.1' => 'oeu', 'Os01g0210400' => 'osa', 'Os01g0304300' => 'osa', 'Os01g0749100' => 'osa', 'Os02g0745800' => 'osa', 'Os03g0769050' => 'osa', 'Os05g0531500' => 'osa', 'Os06g0724300' => 'osa', 'Os11g0198100' => 'osa', 'Peaxi162Scf00069g01425' => 'pax', 'Peaxi162Scf00280g00811' => 'pax', 'Peaxi162Scf00310g00615' => 'pax', 'Peaxi162Scf00362g00542' => 'pax', 'Peaxi162Scf00461g00310' => 'pax', 'Peaxi162Scf00530g00118' => 'pax', 'Peaxi162Scf00541g00057' => 'pax', 'Peaxi162Scf00661g00017' => 'pax', 'Peaxi162Scf00926g00027' => 'pax', 'Peaxi162Scf01064g00263' => 'pax', 'Peaxi162Scf01211g00135' => 'pax', 'PGR004G2336' => 'pgr', 'PGR042G0327' => 'pgr', 'PGR042G1957' => 'pgr', 'PGR042G2003' => 'pgr', 'PGR042G3929' => 'pgr', 'PGR083G1137' => 'pgr', 'PGR083G1364' => 'pgr', 'PGSC0003DMG400003381' => 'stu', 'PGSC0003DMG400003417' => 'stu', 'PGSC0003DMG400008981' => 'stu', 'PGSC0003DMG400012417' => 'stu', 'PGSC0003DMG400012823' => 'stu', 'PGSC0003DMG400016885' => 'stu', 'PGSC0003DMG400022812' => 'stu', 'PGSC0003DMG400029726' => 'stu', 'PGSC0003DMG401009243' => 'stu', 'PGSC0003DMG401031505' => 'stu', 'PGSC0003DMG402031505' => 'stu', 'Phvul.001G017600' => 'pvu', 'Phvul.002G193500' => 'pvu', 'Phvul.002G228900' => 'pvu', 'Phvul.002G236800' => 'pvu', 'Phvul.003G049500' => 'pvu', 'Phvul.005G072000' => 'pvu', 'Phvul.006G164800' => 'pvu', 'Phvul.006G185100' => 'pvu', 'Phvul.007G090000' => 'pvu', 'Potri.001G399800' => 'ptr', 'Potri.002G149900' => 'ptr', 'Potri.004G044100' => 'ptr', 'Potri.004G177600' => 'ptr', 'Potri.009G138000' => 'ptr', 'Potri.010G094000' => 'ptr', 'Potri.011G053000' => 'ptr', 'Potri.011G119300' => 'ptr', 'Potri.013G113700' => 'ptr', 'Potri.018G107800' => 'ptr', 'Potri.019G084100' => 'ptr', 'Pp3c14_23720' => 'ppa', 'Pp3c16_6340' => 'ppa', 'Pp3c23_13420' => 'ppa', 'Pp3c24_2740' => 'ppa', 'Pp3c25_860' => 'ppa', 'Pp3c8_21750' => 'ppa', 'Prupe.1G273000' => 'ppe', 'Prupe.1G273700' => 'ppe', 'Prupe.1G274100' => 'ppe', 'Prupe.2G023300' => 'ppe', 'Prupe.4G048000' => 'ppe', 'Prupe.4G080400' => 'ppe', 'Prupe.4G181200' => 'ppe', 'Prupe.8G056900' => 'ppe', 'Prupe.8G168700' => 'ppe', 'Psat1g189080' => 'psa', 'Psat1g204760' => 'psa', 'Psat4g175560' => 'psa', 'Psat4g177720' => 'psa', 'Psat5g244240' => 'psa', 'Psat6g010720' => 'psa', 'Psat6g187200' => 'psa', 'Psat7g072040' => 'psa', 'PSO017G3501' => 'pso', 'PSO063G2148' => 'pso', 'PSO063G5608' => 'pso', 'PSO210G6392' => 'pso', 'PSO541G2319' => 'pso', 'PSO541G2836' => 'pso', 'PSO541G4012' => 'pso', 'PSO541G6253' => 'pso', 'PSO675G0580' => 'pso', 'PSO675G0856' => 'pso', 'PSO675G5635' => 'pso', 'PSO675G9157' => 'pso', 'PSO832G1660' => 'pso', 'PSO832G1969' => 'pso', 'QL02p007186' => 'qlo', 'QL02p033904' => 'qlo', 'QL03p064391' => 'qlo', 'QL05p040593' => 'qlo', 'QL05p058242' => 'qlo', 'QL08p021825' => 'qlo', 'QL11p004981' => 'qlo', 'RcHm_v2.0_Chr1g0318301' => 'rch', 'RcHm_v2.0_Chr4g0418501' => 'rch', 'RcHm_v2.0_Chr4g0439971' => 'rch', 'RcHm_v2.0_Chr5g0008541' => 'rch', 'RcHm_v2.0_Chr5g0014101' => 'rch', 'RcHm_v2.0_Chr5g0014131' => 'rch', 'RcHm_v2.0_Chr5g0033621' => 'rch', 'RcHm_v2.0_Chr6g0272041' => 'rch', 'RcHm_v2.0_Chr6g0278831' => 'rch', 'Rhsim02G0130400' => 'rsi', 'Rhsim02G0171100' => 'rsi', 'Rhsim05G0053000' => 'rsi', 'Rhsim05G0053100' => 'rsi', 'Rhsim06G0096500' => 'rsi', 'Rhsim06G0096600' => 'rsi', 'Rhsim06G0199100' => 'rsi', 'Rhsim12G0062300' => 'rsi', 'Rhsim12G0062800' => 'rsi', 'Sabra02G0118600' => 'sbr', 'Sabra04G0027300' => 'sbr', 'Sabra04G0119500' => 'sbr', 'Sabra08G0112500' => 'sbr', 'Sabra11G0036800' => 'sbr', 'Sabra11G0103800' => 'sbr', 'Sabra13G0096300' => 'sbr', 'Sabra16G0262300' => 'sbr', 'Sabra18G0091700' => 'sbr', 'Sabra19G0095400' => 'sbr', 'SalBow6G3080' => 'sbo', 'SalBow7G1157' => 'sbo', 'SalBow7G2123' => 'sbo', 'SalBow7G2285' => 'sbo', 'SalBow7G3537' => 'sbo', 'SalBow8G2947' => 'sbo', 'SalBow8G4463' => 'sbo', 'SalBow8G5466' => 'sbo', 'Sc01g0001750' => 'sci', 'Sc02g0006640' => 'sci', 'Sc02g0006670' => 'sci', 'Sc04g0008220' => 'sci', 'Sc05g0006190' => 'sci', 'Sc08g0002760' => 'sci', 'Sc17g0006170' => 'sci', 'Sc22g0002050' => 'sci', 'Sc23g0001190' => 'sci', 'Sc24g0000980' => 'sci', 'Sed0006245' => 'sed', 'Sed0007543' => 'sed', 'Sed0009411' => 'sed', 'Sed0010765' => 'sed', 'Sed0012944' => 'sed', 'Sed0014682' => 'sed', 'Sed0016174' => 'sed', 'Sed0016796' => 'sed', 'Sed0020317' => 'sed', 'Sed0021467' => 'sed', 'SEGI_01316' => 'sgi', 'SEGI_03374' => 'sgi', 'SEGI_16265' => 'sgi', 'SEGI_18569' => 'sgi', 'SEGI_20351' => 'sgi', 'SEGI_26395' => 'sgi', 'SEGI_29469' => 'sgi', 'SEGI_34771' => 'sgi', 'SEGI_36769' => 'sgi', 'SEGI_37139' => 'sgi', 'SGA_v2.0_scaffold100G29687' => 'sas', 'SGA_v2.0_scaffold118G32472' => 'sas', 'SGA_v2.0_scaffold14G07051' => 'sas', 'SGA_v2.0_scaffold183G39845' => 'sas', 'SGA_v2.0_scaffold1G00174' => 'sas', 'SGA_v2.0_scaffold22G09714' => 'sas', 'SGA_v2.0_scaffold333G48992' => 'sas', 'SGA_v2.0_scaffold46G17491' => 'sas', 'SGA_v2.0_scaffold49G18294' => 'sas', 'SGA_v2.0_scaffold63G21658' => 'sas', 'SHI01741' => 'shi', 'SHI05771' => 'shi', 'SHI18077' => 'shi', 'SHI20525' => 'shi', 'SHI20527' => 'shi', 'SHI20528' => 'shi', 'SMO172G0185' => 'smo', 'SMO198G0020' => 'smo', 'SMO351G0006' => 'smo', 'SMO356G0118' => 'smo', 'SMO358G0296' => 'smo', 'SMO367G0079' => 'smo', 'SMO367G1277' => 'smo', 'Solyc01g014220.3' => 'sly', 'Solyc01g111770.2' => 'sly', 'Solyc02g078180.3' => 'sly', 'Solyc03g006430.3' => 'sly', 'Solyc03g006456.1' => 'sly', 'Solyc03g079860.2' => 'sly', 'Solyc04g079770.3' => 'sly', 'Solyc05g007430.4' => 'sly', 'Solyc07g063150.3' => 'sly', 'Solyc08g016620.3' => 'sly', 'Solyc09g057590.3' => 'sly', 'Solyc09g057600.1' => 'sly', 'Solyc10g009050.3' => 'sly', 'Solyc11g017420.2' => 'sly', 'Sopen01g053810' => 'spe', 'Sopen02g023040' => 'spe', 'Sopen03g002440' => 'spe', 'Sopen04g033350' => 'spe', 'Sopen05g003310' => 'spe', 'Sopen07g004050' => 'spe', 'Sopen07g031340' => 'spe', 'Sopen08g006990' => 'spe', 'Sopen10g004830' => 'spe', 'Sopen11g009370' => 'spe', 'Sp1g24450' => 'spa', 'Sp1g29670' => 'spa', 'Sp1g39600' => 'spa', 'Sp2g11080' => 'spa', 'Sp2g13970' => 'spa', 'Sp4g16130' => 'spa', 'Sp6g13080' => 'spa', 'Sp7g37270' => 'spa', 'TAR371G0065' => 'tar', 'TAR376G0340' => 'tar', 'TAR376G0435' => 'tar', 'TAR381G0002' => 'tar', 'TAR381G1236' => 'tar', 'TAR624G0055' => 'tar', 'TAR624G0324' => 'tar', 'TAR624G0696' => 'tar', 'TAR624G0906' => 'tar', 'TAR625G0107' => 'tar', 'TAR626G0015' => 'tar', 'TAR626G1356' => 'tar', 'TAR627G0888' => 'tar', 'TAR628G0399' => 'tar', 'TAR628G1327' => 'tar', 'TAR629G2831' => 'tar', 'TAR629G2874' => 'tar', 'TAR633G1432' => 'tar', 'TAR633G2771' => 'tar', 'THA.LOC104803394' => 'tha', 'THA.LOC104805153' => 'tha', 'THA.LOC104806784' => 'tha', 'THA.LOC104810473' => 'tha', 'THA.LOC104813100' => 'tha', 'THA.LOC104814215' => 'tha', 'THA.LOC104815554' => 'tha', 'THA.LOC104820544' => 'tha', 'THA.LOC104824754' => 'tha', 'THA.LOC104827717' => 'tha', 'Thecc.02G031400' => 'tca', 'Thecc.02G055900' => 'tca', 'Thecc.02G350800' => 'tca', 'Thecc.06G150900' => 'tca', 'Thecc.06G186600' => 'tca', 'Thecc.07G089600' => 'tca', 'Thecc.08G020400' => 'tca', 'Thecc.08G182100' => 'tca', 'Thhalv10000873m.g' => 'esa', 'Thhalv10004185m.g' => 'esa', 'Thhalv10006981m.g' => 'esa', 'Thhalv10007204m.g' => 'esa', 'Thhalv10011374m.g' => 'esa', 'Thhalv10013482m.g' => 'esa', 'Thhalv10017801m.g' => 'esa', 'Thhalv10024983m.g' => 'esa', 'TPR.G12072' => 'tpr', 'TPR.G15769' => 'tpr', 'TPR.G16504' => 'tpr', 'TPR.G16506' => 'tpr', 'TPR.G24345' => 'tpr', 'TPR.G26666' => 'tpr', 'TPR.G27320' => 'tpr', 'TPR.G31819' => 'tpr', 'TPR.G38879' => 'tpr', 'TPR.G39015' => 'tpr', 'TPR.G8819' => 'tpr', 'TWI09G0924' => 'twi', 'TWI12G0811' => 'twi', 'TWI12G1294' => 'twi', 'TWI31G0150' => 'twi', 'TWI36G1262' => 'twi', 'TWI38G1287' => 'twi', 'TWI38G1633' => 'twi', 'TWI38G1982' => 'twi', 'TWI39G0116' => 'twi', 'TWI60G1011' => 'twi', 'TWI63G0171' => 'twi', 'TWI73G0839' => 'twi', 'TWI79G1511' => 'twi', 'unitig_0.g915' => 'ugi', 'unitig_0.g916' => 'ugi', 'unitig_21.g20219' => 'ugi', 'unitig_21.g20416' => 'ugi', 'unitig_578.g16132' => 'ugi', 'unitig_578.g16718' => 'ugi', 'unitig_62.g23481' => 'ugi', 'unitig_744.g24535' => 'ugi', 'unitig_749.g13525' => 'ugi', 'vmacro01248' => 'vma', 'vmacro02290' => 'vma', 'vmacro10946' => 'vma', 'vmacro11865' => 'vma', 'vmacro12493' => 'vma', 'vmacro17322' => 'vma', 'vmacro21599' => 'vma', 'vmacro23041' => 'vma', 'VMungo0251G0004' => 'vmu', 'VMungo0251G2639' => 'vmu', 'VMungo0251G2967' => 'vmu', 'VMungo0540G0864' => 'vmu', 'VMungo0540G1569' => 'vmu', 'VMungo0647G0317' => 'vmu', 'VMungo0720G1373' => 'vmu', 'VMungo0720G1508' => 'vmu', 'VMungo1080G0485' => 'vmu', 'VMungo1215G3177' => 'vmu', 'Zm00001eb112600' => 'zma', 'Zm00001eb120220' => 'zma', 'Zm00001eb153240' => 'zma', 'Zm00001eb168880' => 'zma', 'Zm00001eb213920' => 'zma', 'Zm00001eb228280' => 'zma', 'Zm00001eb254580' => 'zma', 'Zm00001eb272180' => 'zma', 'Zm00001eb293190' => 'zma', 'Zm00001eb322930' => 'zma', 'Zm00001eb353360' => 'zma', 'Zm00001eb353390' => 'zma', 'Zm00001eb353430' => 'zma', 'Zm00001eb353440' => 'zma', 'Zm00001eb353780' => 'zma' ) $gf_id = 'HOM05D000499' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000499' ) $data_identifier = 'HOM05D000499' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 29, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 12, 'amhyb' => (int) 8, 'aly' => (int) 12, 'aox' => (int) 9, 'arhy' => (int) 26, 'ath' => (int) 8, 'atr' => (int) 7, 'acertr' => (int) 10, 'cqu' => (int) 15, 'bca' => (int) 29, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 11, 'cansat' => (int) 8, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 9, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 8, 'cpa' => (int) 10, 'csa' => (int) 7, 'camsi' => (int) 20, 'dca' => (int) 8, 'din' => (int) 12, 'dzi' => (int) 14, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 6, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 38, 'gra' => (int) 16, 'vvi' => (int) 8, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 5, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 11, 'lja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 11, 'mpo' => (int) 3, 'mbi' => (int) 14, 'mdo' => (int) 14, 'mtr' => (int) 8, 'cme' => (int) 9, 'egut' => (int) 9, 'ama' => (int) 11, 'nta' => (int) 17, 'nnu' => (int) 11, 'oeu' => (int) 18, 'osa' => (int) 8, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 6, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 9, 'rsi' => (int) 9, 'sbr' => (int) 10, 'sbo' => (int) 8, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 10, 'sas' => (int) 10, 'shi' => (int) 6, 'smo' => (int) 7, 'sly' => (int) 14, 'spe' => (int) 10, 'spa' => (int) 8, 'tar' => (int) 19, 'tha' => (int) 10, 'tca' => (int) 8, 'esa' => (int) 8, 'tpr' => (int) 11, 'twi' => (int) 13, 'ugi' => (int) 9, 'vma' => (int) 8, 'vmu' => (int) 10, 'zma' => (int) 15 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb353780' $species_info = array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ) $local_species = 'pvu' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000499', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1066', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p29780' => 'bna', 'A02p33180' => 'bna', 'A03p16470' => 'bna', 'A03p66010' => 'bna', 'A04p25970' => 'bna', 'A06p01270' => 'bna', 'A06p46080' => 'bna', 'A07p11400' => 'bna', 'A08p01840' => 'bna', 'A08p08230' => 'bna', 'A08p25740' => 'bna', 'A09p32070' => 'bna', 'A09p37830' => 'bna', 'A09p42840' => 'bna', 'A09p42850' => 'bna', 'Aa31LG10G2060' => 'aar', 'Aa31LG2G7410' => 'aar', 'Aa31LG6G10200' => 'aar', 'Aa31LG6G16680' => 'aar', 'Aa31LG6G8470' => 'aar', 'Aa31LG9G12730' => 'aar', 'Aa31LG9G13680' => 'aar', 'Aa31LG9G14920' => 'aar', 'Aa31LG9G6650' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4977' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5467' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3254' => 'aag', 'Actinidia02578' => 'ach', 'Actinidia07693' => 'ach', 'Actinidia08413' => 'ach', 'Actinidia08414' => 'ach', 'Actinidia15289' => 'ach', 'Actinidia19871' => 'ach', 'Actinidia21475' => 'ach', 'Actinidia22576' => 'ach', 'Actinidia28327' => 'ach', 'Actinidia32491' => 'ach', 'Actinidia39463' => 'ach', 'Actinidia39571' => 'ach', 'Ah.01g013750' => 'amhyb', 'Ah.01g023210' => 'amhyb', 'Ah.04g164850' => 'amhyb', 'Ah.05g178060' => 'amhyb', 'Ah.07g204270' => 'amhyb', 'Ah.07g208480' => 'amhyb', 'Ah.09g237410' => 'amhyb', 'Ah.14g089460' => 'amhyb', 'AL1G41790' => 'aly', 'AL1G49050' => 'aly', 'AL1G53810' => 'aly', 'AL1G61400' => 'aly', 'AL4G18580' => 'aly', 'AL5G12510' => 'aly', 'AL5G12540' => 'aly', 'AL6G43230' => 'aly', 'AL7G10370' => 'aly', 'AL7G19250' => 'aly', 'AL8G12240' => 'aly', 'AL8G18540' => 'aly', 'Aqoxy1G02409' => 'aox', 'Aqoxy2G03993' => 'aox', 'Aqoxy3G03357' => 'aox', 'Aqoxy4G00785' => 'aox', 'Aqoxy5G02598' => 'aox', 'Aqoxy6G00132' => 'aox', 'Aqoxy7G01776' => 'aox', 'Aqoxy7G02316' => 'aox', 'Aqoxy7G03973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.12AFKW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B8730' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27IQR1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3F75VG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3RE0GA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41TCQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.527VTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FIR39' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5W8UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DA38EV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ63HS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H1I32C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HC27T5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4M8AP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7N3CZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9UVDZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LS1NQA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT1D4B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SKC4TM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCFV76' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF9Q1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQWD9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1ZM88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WE07RT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YCK7VH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJE6Q6' => 'arhy', 'AT1G28240' => 'ath', 'AT1G34550' => 'ath', 'AT1G53040' => 'ath', 'AT2G02910' => 'ath', 'AT4G09630' => 'ath', 'AT4G38500' => 'ath', 'AT5G42660' => 'ath', 'AT5G46220' => 'ath', 'ATR0152G026' => 'atr', 'ATR0564G343' => 'atr', 'ATR0706G151' => 'atr', 'ATR0733G207' => 'atr', 'ATR0751G234' => 'atr', 'ATR0807G048' => 'atr', 'ATR1091G084' => 'atr', 'Atru.chr10.1229' => 'acertr', 'Atru.chr10.1230' => 'acertr', 'Atru.chr10.1874' => 'acertr', 'Atru.chr11.1808' => 'acertr', 'Atru.chr13.1795' => 'acertr', 'Atru.chr13.570' => 'acertr', 'Atru.chr2.2608' => 'acertr', 'Atru.chr2.2609' => 'acertr', 'Atru.chr5.3428' => 'acertr', 'Atru.chr8.1171' => 'acertr', 'AUR62004651' => 'cqu', 'AUR62008675' => 'cqu', 'AUR62010014' => 'cqu', 'AUR62013004' => 'cqu', 'AUR62014825' => 'cqu', 'AUR62015015' => 'cqu', 'AUR62015151' => 'cqu', 'AUR62017020' => 'cqu', 'AUR62019422' => 'cqu', 'AUR62023570' => 'cqu', 'AUR62025571' => 'cqu', 'AUR62029098' => 'cqu', 'AUR62033863' => 'cqu', 'AUR62034296' => 'cqu', 'AUR62040075' => 'cqu', 'BcaB02g07334' => 'bca', 'BcaB02g10575' => 'bca', 'BcaB03g12119' => 'bca', 'BcaB03g12120' => 'bca', 'BcaB03g13945' => 'bca', 'BcaB04g17123' => 'bca', 'BcaB04g17867' => 'bca', 'BcaB04g19839' => 'bca', 'BcaB07g30317' => 'bca', 'BcaB07g32432' => 'bca', 'BcaB07g33362' => 'bca', 'BcaB08g36611' => 'bca', 'BcaC01g00028' => 'bca', 'BcaC01g01356' => 'bca', 'BcaC01g02034' => 'bca', 'BcaC01g06051' => 'bca', 'BcaC03g16839' => 'bca', 'BcaC03g17176' => 'bca', 'BcaC05g26829' => 'bca', 'BcaC06g31490' => 'bca', 'BcaC06g35344' => 'bca', 'BcaC06g36570' => 'bca', 'BcaC07g37537' => 'bca', 'BcaC08g43491' => 'bca', 'BcaC08g43773' => 'bca', 'BcaNung00234' => 'bca', 'BcaNung01982' => 'bca', 'BcaNung03707' => 'bca', 'BcaNung06454' => 'bca', 'BolC2t10762H' => 'bol', 'BolC2t11191H' => 'bol', 'BolC3t14322H' => 'bol', 'BolC3t19747H' => 'bol', 'BolC3t21425H' => 'bol', 'BolC4t27800H' => 'bol', 'BolC5t31423H' => 'bol', 'BolC6t35951H' => 'bol', 'BolC6t36282H' => 'bol', 'BolC7t40678H' => 'bol', 'BolC7t40679H' => 'bol', 'BolC7t42222H' => 'bol', 'BolC7t43492H' => 'bol', 'BolC7t46785H' => 'bol', 'BolC8t47853H' => 'bol', 'BolC9t56805H' => 'bol', 'BraA02t08000Z' => 'bra', 'BraA02t08341Z' => 'bra', 'BraA03t10936Z' => 'bra', 'BraA03t15657Z' => 'bra', 'BraA04t18100Z' => 'bra', 'BraA05t20523Z' => 'bra', 'BraA06t23353Z' => 'bra', 'BraA06t27473Z' => 'bra', 'BraA06t27769Z' => 'bra', 'BraA07t28928Z' => 'bra', 'BraA08t32236Z' => 'bra', 'BraA08t32841Z' => 'bra', 'BraA08t34524Z' => 'bra', 'BraA09t38742Z' => 'bra', 'BraA09t39295Z' => 'bra', 'C02p47180' => 'bna', 'C02p50990' => 'bna', 'C03p19360' => 'bna', 'C03p74950' => 'bna', 'C03p91000' => 'bna', 'C04p63260' => 'bna', 'C05p27050' => 'bna', 'C06p08750' => 'bna', 'C06p11490' => 'bna', 'C07p02820' => 'bna', 'C07p17180' => 'bna', 'C07p29440' => 'bna', 'C07p63730' => 'bna', 'C09p39260' => 'bna', 'CAN.G1164.34' => 'can', 'CAN.G1164.39' => 'can', 'CAN.G1530.3' => 'can', 'CAN.G162.61' => 'can', 'CAN.G176.6' => 'can', 'CAN.G289.49' => 'can', 'CAN.G370.21' => 'can', 'CAN.G370.22' => 'can', 'CAN.G371.117' => 'can', 'CAN.G58.37' => 'can', 'CAN.G588.98' => 'can', 'CANSAT21G2266' => 'cansat', 'CANSAT25G2799' => 'cansat', 'CANSAT35G0862' => 'cansat', 'CANSAT35G1704' => 'cansat', 'CANSAT35G1760' => 'cansat', 'CANSAT56G3971' => 'cansat', 'CANSAT56G4116' => 'cansat', 'CANSAT80G1259' => 'cansat', 'CARHR027730' => 'chi', 'CARHR033880' => 'chi', 'CARHR043270' => 'chi', 'CARHR145330' => 'chi', 'CARHR145340' => 'chi', 'CARHR175570' => 'chi', 'CARHR181570' => 'chi', 'CARHR258470' => 'chi', 'CARHR260490' => 'chi', 'CARHR294220' => 'chi', 'Carub.0001s2668' => 'cru', 'Carub.0001s3257' => 'cru', 'Carub.0001s4220' => 'cru', 'Carub.0005s0179' => 'cru', 'Carub.0006s2807' => 'cru', 'Carub.0007s0039' => 'cru', 'Carub.0008s0169' => 'cru', 'Carub.0008s0636' => 'cru', 'Ca_00338_v3' => 'car', 'Ca_00542_v3' => 'car', 'Ca_01844_v3' => 'car', 'Ca_10611_v3' => 'car', 'Ca_13326_v3' => 'car', 'Ca_17944_v3' => 'car', 'Ca_18546_v3' => 'car', 'Ca_24219_v3' => 'car', 'Ca_29972_v3' => 'car', 'CBR_g3681' => 'cbr', 'CBR_g40021' => 'cbr', 'Cc01_g08140' => 'ccan', 'Cc02_g13410' => 'ccan', 'Cc02_g37480' => 'ccan', 'Cc05_g12030' => 'ccan', 'Cc09_g03370' => 'ccan', 'Cc09_g10300' => 'ccan', 'Cc10_g03530' => 'ccan', 'Cc10_g11380' => 'ccan', 'CDE01G0176' => 'cde', 'CDE02G0675' => 'cde', 'CDE02G0942' => 'cde', 'CDE02G1153' => 'cde', 'CDE02G4177' => 'cde', 'CDE04G2117' => 'cde', 'CDE04G2736' => 'cde', 'CDE08G1161' => 'cde', 'CDE09G1238' => 'cde', 'Cfa000467' => 'cfa', 'Cfa000947' => 'cfa', 'Cfa004969' => 'cfa', 'Cfa005284' => 'cfa', 'Cfa008993' => 'cfa', 'Cfa018187' => 'cfa', 'Cfa018454' => 'cfa', 'Cfa020585' => 'cfa', 'Ciclev10000424m.g' => 'ccl', 'Ciclev10003605m.g' => 'ccl', 'Ciclev10007828m.g' => 'ccl', 'Ciclev10014620m.g' => 'ccl', 'Ciclev10015169m.g' => 'ccl', 'Ciclev10018291m.g' => 'ccl', 'Ciclev10028256m.g' => 'ccl', 'Ciclev10033822m.g' => 'ccl', 'CiPaw.05G060300' => 'cil', 'CiPaw.05G085000' => 'cil', 'CiPaw.06G083700' => 'cil', 'CiPaw.06G120300' => 'cil', 'CiPaw.09G060500' => 'cil', 'CiPaw.09G123800' => 'cil', 'CiPaw.11G169700' => 'cil', 'CiPaw.12G118300' => 'cil', 'CiPaw.15G071000' => 'cil', 'CiPaw.15G081900' => 'cil', 'ClCG01G024610' => 'cla', 'ClCG03G006070' => 'cla', 'ClCG05G019250' => 'cla', 'ClCG09G009500' => 'cla', 'ClCG11G008200' => 'cla', 'ClCG11G018080' => 'cla', 'COL.COLO4_17373' => 'col', 'COL.COLO4_22994' => 'col', 'COL.COLO4_26389' => 'col', 'COL.COLO4_27170' => 'col', 'COL.COLO4_31074' => 'col', 'COL.COLO4_31465' => 'col', 'COL.COLO4_36438' => 'col', 'COL.COLO4_36439' => 'col', 'Cpa.g.c38781' => 'cpa', 'Cpa.g.sc128.12' => 'cpa', 'Cpa.g.sc166.7' => 'cpa', 'Cpa.g.sc166.8' => 'cpa', 'Cpa.g.sc20.111' => 'cpa', 'Cpa.g.sc27.31' => 'cpa', 'Cpa.g.sc64.36' => 'cpa', 'Cpa.g.sc64.37' => 'cpa', 'Cpa.g.sc66.49' => 'cpa', 'Cpa.g.sc80.64' => 'cpa', 'CsaV3_1G012320' => 'csa', 'CsaV3_2G008480' => 'csa', 'CsaV3_2G033450' => 'csa', 'CsaV3_3G044830' => 'csa', 'CsaV3_4G033710' => 'csa', 'CsaV3_6G051730' => 'csa', 'CsaV3_7G025350' => 'csa', 'CSS0001067' => 'camsi', 'CSS0005996' => 'camsi', 'CSS0006590' => 'camsi', 'CSS0009673' => 'camsi', 'CSS0010201' => 'camsi', 'CSS0010549' => 'camsi', 'CSS0011364' => 'camsi', 'CSS0014473' => 'camsi', 'CSS0014961' => 'camsi', 'CSS0020191' => 'camsi', 'CSS0021165' => 'camsi', 'CSS0022306' => 'camsi', 'CSS0030591' => 'camsi', 'CSS0030696' => 'camsi', 'CSS0032653' => 'camsi', 'CSS0037487' => 'camsi', 'CSS0041102' => 'camsi', 'CSS0041261' => 'camsi', 'CSS0046246' => 'camsi', 'CSS0049256' => 'camsi', 'DCAR_004075' => 'dca', 'DCAR_011538' => 'dca', 'DCAR_019553' => 'dca', 'DCAR_020952' => 'dca', 'DCAR_021739' => 'dca', 'DCAR_027407' => 'dca', 'DCAR_027913' => 'dca', 'DCAR_028066' => 'dca', 'Dinv05899' => 'din', 'Dinv07563' => 'din', 'Dinv08010' => 'din', 'Dinv14125' => 'din', 'Dinv20172' => 'din', 'Dinv30743' => 'din', 'Dinv31229' => 'din', 'Dinv34162' => 'din', 'Dinv36028' => 'din', 'Dinv39368' => 'din', 'Dinv40565' => 'din', 'Dinv41706' => 'din', 'Duzib052G0089' => 'dzi', 'Duzib116G0641' => 'dzi', 'Duzib132G0069' => 'dzi', 'Duzib132G1219' => 'dzi', 'Duzib147G0278' => 'dzi', 'Duzib160G0480' => 'dzi', 'Duzib170G0661' => 'dzi', 'Duzib177G0591' => 'dzi', 'Duzib187G1353' => 'dzi', 'Duzib192G0858' => 'dzi', 'Duzib192G0883' => 'dzi', 'Duzib213G0506' => 'dzi', 'Duzib235G0289' => 'dzi', 'Duzib251G0422' => 'dzi', 'ECA232G3898' => 'eca', 'ECA233G5950' => 'eca', 'ECA234G1699' => 'eca', 'ECA234G2421' => 'eca', 'ECA236G0426' => 'eca', 'ECA236G4331' => 'eca', 'ECA248G2573' => 'eca', 'EL10Ac1g00077' => 'bvu', 'EL10Ac1g01746' => 'bvu', 'EL10Ac2g03464' => 'bvu', 'EL10Ac4g08176' => 'bvu', 'EL10Ac7g17521' => 'bvu', 'EL10Ac8g20386' => 'bvu', 'EL10Ac9g21343' => 'bvu', 'EL10Ac9g22688' => 'bvu', 'Eucgr.B03434' => 'egr', 'Eucgr.D00618' => 'egr', 'Eucgr.E02395' => 'egr', 'Eucgr.F01129' => 'egr', 'Eucgr.F02622' => 'egr', 'Eucgr.F04207' => 'egr', 'FAN01G0570' => 'fan', 'FAN03G3351' => 'fan', 'FAN06G3702' => 'fan', 'FAN07G2149' => 'fan', 'FAN10G3758' => 'fan', 'FAN11G1170' => 'fan', 'FAN11G2050' => 'fan', 'FAN11G2724' => 'fan', 'FAN12G1700' => 'fan', 'FAN12G2028' => 'fan', 'FAN15G1160' => 'fan', 'FAN15G3063' => 'fan', 'FAN16G2540' => 'fan', 'FAN16G3077' => 'fan', 'FAN16G3624' => 'fan', 'FAN17G0221' => 'fan', 'FAN20G2492' => 'fan', 'FAN20G2905' => 'fan', 'FAN21G0548' => 'fan', 'FAN21G1300' => 'fan', 'FAN22G0077' => 'fan', 'FAN22G1315' => 'fan', 'FAN24G1280' => 'fan', 'FAN24G1445' => 'fan', 'FAN24G3527' => 'fan', 'FAN25G0464' => 'fan', 'FAN25G2885' => 'fan', 'FAN25G3270' => 'fan', 'FAN27G1101' => 'fan', 'FAN27G2846' => 'fan', 'FAN27G3524' => 'fan', 'FvH4_2g11770' => 'fve', 'FvH4_2g15630' => 'fve', 'FvH4_3g05570' => 'fve', 'FvH4_3g09110' => 'fve', 'FvH4_3g19940' => 'fve', 'FvH4_4g04821' => 'fve', 'FvH4_4g31480' => 'fve', 'FvH4_7g01740' => 'fve', 'Glyma.05G130400' => 'gma', 'Glyma.05G156400' => 'gma', 'Glyma.07G197000' => 'gma', 'Glyma.08G085151' => 'gma', 'Glyma.08G114500' => 'gma', 'Glyma.08G300400' => 'gma', 'Glyma.10G215800' => 'gma', 'Glyma.12G224400' => 'gma', 'Glyma.13G179300' => 'gma', 'Glyma.13G218151' => 'gma', 'Glyma.13G238800' => 'gma', 'Glyma.13G276900' => 'gma', 'Glyma.14G078200' => 'gma', 'Glyma.15G074500' => 'gma', 'Glyma.15G094100' => 'gma', 'Glyma.17G247200' => 'gma', 'Glyma.18G120100' => 'gma', 'Glyma.20G176000' => 'gma', 'Gohir.A01G063600' => 'ghi', 'Gohir.A01G170301' => 'ghi', 'Gohir.A02G060500' => 'ghi', 'Gohir.A05G133850' => 'ghi', 'Gohir.A05G161400' => 'ghi', 'Gohir.A06G012900' => 'ghi', 'Gohir.A06G035901' => 'ghi', 'Gohir.A06G127100' => 'ghi', 'Gohir.A06G210500' => 'ghi', 'Gohir.A08G008650' => 'ghi', 'Gohir.A09G072700' => 'ghi', 'Gohir.A09G088301' => 'ghi', 'Gohir.A10G040600' => 'ghi', 'Gohir.A12G036300' => 'ghi', 'Gohir.A12G143350' => 'ghi', 'Gohir.A12G165500' => 'ghi', 'Gohir.A13G145700' => 'ghi', 'Gohir.D01G050000' => 'ghi', 'Gohir.D01G051366' => 'ghi', 'Gohir.D01G161350' => 'ghi', 'Gohir.D02G065900' => 'ghi', 'Gohir.D05G164200' => 'ghi', 'Gohir.D05G355500' => 'ghi', 'Gohir.D06G010400' => 'ghi', 'Gohir.D06G111250' => 'ghi', 'Gohir.D06G132000' => 'ghi', 'Gohir.D06G210500' => 'ghi', 'Gohir.D07G165675' => 'ghi', 'Gohir.D08G062240' => 'ghi', 'Gohir.D08G086101' => 'ghi', 'Gohir.D08G138060' => 'ghi', 'Gohir.D09G072300' => 'ghi', 'Gohir.D10G041400' => 'ghi', 'Gohir.D11G191020' => 'ghi', 'Gohir.D11G212066' => 'ghi', 'Gohir.D12G036300' => 'ghi', 'Gohir.D12G168600' => 'ghi', 'Gohir.D13G150600' => 'ghi', 'Gorai.001G057300' => 'gra', 'Gorai.002G069900' => 'gra', 'Gorai.002G200000' => 'gra', 'Gorai.003G067600' => 'gra', 'Gorai.005G074800' => 'gra', 'Gorai.006G087300' => 'gra', 'Gorai.008G037500' => 'gra', 'Gorai.008G181400' => 'gra', 'Gorai.009G169400' => 'gra', 'Gorai.009G387900' => 'gra', 'Gorai.010G013300' => 'gra', 'Gorai.010G153800' => 'gra', 'Gorai.010G255800' => 'gra', 'Gorai.011G043700' => 'gra', 'Gorai.011G198900' => 'gra', 'Gorai.013G168400' => 'gra', 'GSVIVG01005212001' => 'vvi', 'GSVIVG01006163001' => 'vvi', 'GSVIVG01009625001' => 'vvi', 'GSVIVG01014338001' => 'vvi', 'GSVIVG01020005001' => 'vvi', 'GSVIVG01021450001' => 'vvi', 'GSVIVG01023975001' => 'vvi', 'GSVIVG01034490001' => 'vvi', 'HanXRQChr04g0112071' => 'han', 'HanXRQChr05g0131151' => 'han', 'HanXRQChr09g0262371' => 'han', 'HanXRQChr09g0268401' => 'han', 'HanXRQChr10g0279241' => 'han', 'HanXRQChr10g0297961' => 'han', 'HanXRQChr11g0326231' => 'han', 'HanXRQChr11g0328471' => 'han', 'HanXRQChr16g0507941' => 'han', 'HanXRQChr17g0560211' => 'han', 'Haze_02108' => 'cav', 'Haze_02428' => 'cav', 'Haze_05593' => 'cav', 'Haze_06448' => 'cav', 'Haze_09427' => 'cav', 'Haze_12022' => 'cav', 'Haze_17612' => 'cav', 'Haze_17928' => 'cav', 'Hma1.2p1_0032F.1_g019250' => 'hma', 'Hma1.2p1_0163F.1_g072690' => 'hma', 'Hma1.2p1_0265F.1_g106710' => 'hma', 'Hma1.2p1_0286F.1_g113970' => 'hma', 'Hma1.2p1_0363F.1_g136640' => 'hma', 'Hma1.2p1_0584F.1_g183470' => 'hma', 'Hma1.2p1_0885F.1_g232570' => 'hma', 'HPP92_006022' => 'vpl', 'HPP92_007320' => 'vpl', 'HPP92_011521' => 'vpl', 'HPP92_019387' => 'vpl', 'HPP92_024038' => 'vpl', 'Hund05891' => 'sun', 'Hund06450' => 'sun', 'Hund12053' => 'sun', 'Hund16800' => 'sun', 'Hund21222' => 'sun', 'Hund22896' => 'sun', 'Hund23746' => 'sun', 'Hund27083' => 'sun', 'Lalb_Chr02g0141831' => 'lal', 'Lalb_Chr02g0141841' => 'lal', 'Lalb_Chr05g0220411' => 'lal', 'Lalb_Chr06g0162081' => 'lal', 'Lalb_Chr09g0327651' => 'lal', 'Lalb_Chr13g0295051' => 'lal', 'Lalb_Chr15g0086801' => 'lal', 'Lalb_Chr16g0383781' => 'lal', 'Lalb_Chr16g0383791' => 'lal', 'Lalb_Chr18g0055441' => 'lal', 'Lalb_Chr18g0059611' => 'lal', 'Lalb_Chr20g0109661' => 'lal', 'Lalb_Chr20g0109831' => 'lal', 'Lalb_Chr20g0121871' => 'lal', 'Lalb_Chr22g0355361' => 'lal', 'Lalb_Chr25g0286371' => 'lal', 'Lj1A1187G43' => 'lonja', 'Lj1A1205T50' => 'lonja', 'Lj1A800G33' => 'lonja', 'Lj1C1187T7' => 'lonja', 'Lj1C843T11' => 'lonja', 'Lj1g0010940' => 'lja', 'Lj2A288T69' => 'lonja', 'Lj3g0024276' => 'lja', 'Lj4A47T76' => 'lonja', 'Lj4g0005805' => 'lja', 'Lj4g0006097' => 'lja', 'Lj4g0008528' => 'lja', 'Lj4g0024907' => 'lja', 'Lj5g0012472' => 'lja', 'Lj5g0018648' => 'lja', 'Lj6C789G1' => 'lonja', 'Lj6g0004000' => 'lja', 'Lj7A292G67' => 'lonja', 'Lj7A292T64' => 'lonja', 'Lj9A400T58' => 'lonja', 'Lsat_1_v5_gn_1_126181' => 'lsa', 'Lsat_1_v5_gn_4_123041' => 'lsa', 'Lsat_1_v5_gn_4_133620' => 'lsa', 'Lsat_1_v5_gn_4_53221' => 'lsa', 'Lsat_1_v5_gn_4_71961' => 'lsa', 'Lsat_1_v5_gn_7_105241' => 'lsa', 'Lsat_1_v5_gn_7_21361' => 'lsa', 'Lsat_1_v5_gn_7_28860' => 'lsa', 'Lsat_1_v5_gn_7_31260' => 'lsa', 'Lsat_1_v5_gn_8_52801' => 'lsa', 'Manes.02G191400' => 'mes', 'Manes.03G110100' => 'mes', 'Manes.04G071100' => 'mes', 'Manes.05G100500' => 'mes', 'Manes.05G164700' => 'mes', 'Manes.15G087000' => 'mes', 'Manes.15G121500' => 'mes', 'Manes.16G028300' => 'mes', 'Manes.17G046100' => 'mes', 'Manes.17G069800' => 'mes', 'Manes.18G100500' => 'mes', 'Mapoly0002s0109' => 'mpo', 'Mapoly0024s0007' => 'mpo', 'Mapoly0089s0032' => 'mpo', 'MBI04_g42241_MAGBIO' => 'mbi', 'MBI05_g11988_MAGBIO' => 'mbi', 'MBI05_g35452_MAGBIO' => 'mbi', 'MBI07_g30179_MAGBIO' => 'mbi', 'MBI07_g35859_MAGBIO' => 'mbi', 'MBI07_g35860_MAGBIO' => 'mbi', 'MBI07_g37166_MAGBIO' => 'mbi', 'MBI08_g18172_MAGBIO' => 'mbi', 'MBI09_g08441_MAGBIO' => 'mbi', 'MBI13_g01676_MAGBIO' => 'mbi', 'MBI14_g42955_MAGBIO' => 'mbi', 'MBI16_g13161_MAGBIO' => 'mbi', 'MBI17_g27204_MAGBIO' => 'mbi', 'MBI19_g21595_MAGBIO' => 'mbi', 'MD00G1148400' => 'mdo', 'MD02G1301200' => 'mdo', 'MD03G1227800' => 'mdo', 'MD05G1041100' => 'mdo', 'MD05G1124800' => 'mdo', 'MD05G1284000' => 'mdo', 'MD05G1338800' => 'mdo', 'MD05G1338900' => 'mdo', 'MD07G1022800' => 'mdo', 'MD10G1047500' => 'mdo', 'MD10G1127500' => 'mdo', 'MD10G1262300' => 'mdo', 'MD10G1293800' => 'mdo', 'MD16G1074300' => 'mdo', 'Medtr1g021670' => 'mtr', 'Medtr1g096320' => 'mtr', 'Medtr2g013690' => 'mtr', 'Medtr2g019450' => 'mtr', 'Medtr2g085170' => 'mtr', 'Medtr4g088785' => 'mtr', 'Medtr8g055930' => 'mtr', 'Medtr8g085850' => 'mtr', 'MELO3C002605.2' => 'cme', 'MELO3C003891.2' => 'cme', 'MELO3C004012.2' => 'cme', 'MELO3C007134.2' => 'cme', 'MELO3C008118.2' => 'cme', 'MELO3C016700.2' => 'cme', 'MELO3C024127.2' => 'cme', 'MELO3C033361.2' => 'cme', 'MELO3C033362.2' => 'cme', 'Migut.C00430' => 'egut', 'Migut.C01246' => 'egut', 'Migut.E00101' => 'egut', 'Migut.H01486' => 'egut', 'Migut.H01939' => 'egut', 'Migut.K00360' => 'egut', 'Migut.M00910' => 'egut', 'Migut.M01139' => 'egut', 'Migut.N02677' => 'egut', 'MSTRG.13252' => 'ama', 'MSTRG.14701' => 'ama', 'MSTRG.1521' => 'ama', 'MSTRG.15884' => 'ama', 'MSTRG.16242' => 'ama', 'MSTRG.22285' => 'ama', 'MSTRG.22444' => 'ama', 'MSTRG.2349' => 'ama', 'MSTRG.26308' => 'ama', 'MSTRG.28296' => 'ama', 'MSTRG.9895' => 'ama', 'Nitab4.5_0000110g0060' => 'nta', 'Nitab4.5_0000420g0130' => 'nta', 'Nitab4.5_0000422g0030' => 'nta', 'Nitab4.5_0000560g0180' => 'nta', 'Nitab4.5_0000703g0100' => 'nta', 'Nitab4.5_0000786g0200' => 'nta', 'Nitab4.5_0001336g0020' => 'nta', 'Nitab4.5_0001796g0030' => 'nta', 'Nitab4.5_0003348g0060' => 'nta', 'Nitab4.5_0003698g0040' => 'nta', 'Nitab4.5_0003942g0090' => 'nta', 'Nitab4.5_0004775g0070' => 'nta', 'Nitab4.5_0004864g0030' => 'nta', 'Nitab4.5_0005615g0020' => 'nta', 'Nitab4.5_0009288g0030' => 'nta', 'Nitab4.5_0009341g0010' => 'nta', 'Nitab4.5_0009535g0010' => 'nta', 'Nn1g03995' => 'nnu', 'Nn1g04100' => 'nnu', 'Nn1g06530' => 'nnu', 'Nn3g16404' => 'nnu', 'Nn3g17212' => 'nnu', 'Nn3g20776' => 'nnu', 'Nn3g21923' => 'nnu', 'Nn5g27737' => 'nnu', 'Nn5g29461' => 'nnu', 'Nn7g38355' => 'nnu', 'Nn8g39873' => 'nnu', 'Oeu000548.2' => 'oeu', 'Oeu004672.1' => 'oeu', 'Oeu015605.2' => 'oeu', 'Oeu016092.1' => 'oeu', 'Oeu017879.3' => 'oeu', 'Oeu024910.1' => 'oeu', 'Oeu028965.1' => 'oeu', 'Oeu031269.1' => 'oeu', 'Oeu031270.1' => 'oeu', 'Oeu032535.1' => 'oeu', 'Oeu034151.1' => 'oeu', 'Oeu034152.1' => 'oeu', 'Oeu034588.2' => 'oeu', 'Oeu050846.1' => 'oeu', 'Oeu050849.2' => 'oeu', 'Oeu051063.2' => 'oeu', 'Oeu052368.1' => 'oeu', 'Oeu052370.1' => 'oeu', 'Os01g0210400' => 'osa', 'Os01g0304300' => 'osa', 'Os01g0749100' => 'osa', 'Os02g0745800' => 'osa', 'Os03g0769050' => 'osa', 'Os05g0531500' => 'osa', 'Os06g0724300' => 'osa', 'Os11g0198100' => 'osa', 'Peaxi162Scf00069g01425' => 'pax', 'Peaxi162Scf00280g00811' => 'pax', 'Peaxi162Scf00310g00615' => 'pax', 'Peaxi162Scf00362g00542' => 'pax', 'Peaxi162Scf00461g00310' => 'pax', 'Peaxi162Scf00530g00118' => 'pax', 'Peaxi162Scf00541g00057' => 'pax', 'Peaxi162Scf00661g00017' => 'pax', 'Peaxi162Scf00926g00027' => 'pax', 'Peaxi162Scf01064g00263' => 'pax', 'Peaxi162Scf01211g00135' => 'pax', 'PGR004G2336' => 'pgr', 'PGR042G0327' => 'pgr', 'PGR042G1957' => 'pgr', 'PGR042G2003' => 'pgr', 'PGR042G3929' => 'pgr', 'PGR083G1137' => 'pgr', 'PGR083G1364' => 'pgr', 'PGSC0003DMG400003381' => 'stu', 'PGSC0003DMG400003417' => 'stu', 'PGSC0003DMG400008981' => 'stu', 'PGSC0003DMG400012417' => 'stu', 'PGSC0003DMG400012823' => 'stu', 'PGSC0003DMG400016885' => 'stu', 'PGSC0003DMG400022812' => 'stu', 'PGSC0003DMG400029726' => 'stu', 'PGSC0003DMG401009243' => 'stu', 'PGSC0003DMG401031505' => 'stu', 'PGSC0003DMG402031505' => 'stu', 'Phvul.001G017600' => 'pvu', 'Phvul.002G193500' => 'pvu', 'Phvul.002G228900' => 'pvu', 'Phvul.002G236800' => 'pvu', 'Phvul.003G049500' => 'pvu', 'Phvul.005G072000' => 'pvu', 'Phvul.006G164800' => 'pvu', 'Phvul.006G185100' => 'pvu', 'Phvul.007G090000' => 'pvu', 'Potri.001G399800' => 'ptr', 'Potri.002G149900' => 'ptr', 'Potri.004G044100' => 'ptr', 'Potri.004G177600' => 'ptr', 'Potri.009G138000' => 'ptr', 'Potri.010G094000' => 'ptr', 'Potri.011G053000' => 'ptr', 'Potri.011G119300' => 'ptr', 'Potri.013G113700' => 'ptr', 'Potri.018G107800' => 'ptr', 'Potri.019G084100' => 'ptr', 'Pp3c14_23720' => 'ppa', 'Pp3c16_6340' => 'ppa', 'Pp3c23_13420' => 'ppa', 'Pp3c24_2740' => 'ppa', 'Pp3c25_860' => 'ppa', 'Pp3c8_21750' => 'ppa', 'Prupe.1G273000' => 'ppe', 'Prupe.1G273700' => 'ppe', 'Prupe.1G274100' => 'ppe', 'Prupe.2G023300' => 'ppe', 'Prupe.4G048000' => 'ppe', 'Prupe.4G080400' => 'ppe', 'Prupe.4G181200' => 'ppe', 'Prupe.8G056900' => 'ppe', 'Prupe.8G168700' => 'ppe', 'Psat1g189080' => 'psa', 'Psat1g204760' => 'psa', 'Psat4g175560' => 'psa', 'Psat4g177720' => 'psa', 'Psat5g244240' => 'psa', 'Psat6g010720' => 'psa', 'Psat6g187200' => 'psa', 'Psat7g072040' => 'psa', 'PSO017G3501' => 'pso', 'PSO063G2148' => 'pso', 'PSO063G5608' => 'pso', 'PSO210G6392' => 'pso', 'PSO541G2319' => 'pso', 'PSO541G2836' => 'pso', 'PSO541G4012' => 'pso', 'PSO541G6253' => 'pso', 'PSO675G0580' => 'pso', 'PSO675G0856' => 'pso', 'PSO675G5635' => 'pso', 'PSO675G9157' => 'pso', 'PSO832G1660' => 'pso', 'PSO832G1969' => 'pso', 'QL02p007186' => 'qlo', 'QL02p033904' => 'qlo', 'QL03p064391' => 'qlo', 'QL05p040593' => 'qlo', 'QL05p058242' => 'qlo', 'QL08p021825' => 'qlo', 'QL11p004981' => 'qlo', 'RcHm_v2.0_Chr1g0318301' => 'rch', 'RcHm_v2.0_Chr4g0418501' => 'rch', 'RcHm_v2.0_Chr4g0439971' => 'rch', 'RcHm_v2.0_Chr5g0008541' => 'rch', 'RcHm_v2.0_Chr5g0014101' => 'rch', 'RcHm_v2.0_Chr5g0014131' => 'rch', 'RcHm_v2.0_Chr5g0033621' => 'rch', 'RcHm_v2.0_Chr6g0272041' => 'rch', 'RcHm_v2.0_Chr6g0278831' => 'rch', 'Rhsim02G0130400' => 'rsi', 'Rhsim02G0171100' => 'rsi', 'Rhsim05G0053000' => 'rsi', 'Rhsim05G0053100' => 'rsi', 'Rhsim06G0096500' => 'rsi', 'Rhsim06G0096600' => 'rsi', 'Rhsim06G0199100' => 'rsi', 'Rhsim12G0062300' => 'rsi', 'Rhsim12G0062800' => 'rsi', 'Sabra02G0118600' => 'sbr', 'Sabra04G0027300' => 'sbr', 'Sabra04G0119500' => 'sbr', 'Sabra08G0112500' => 'sbr', 'Sabra11G0036800' => 'sbr', 'Sabra11G0103800' => 'sbr', 'Sabra13G0096300' => 'sbr', 'Sabra16G0262300' => 'sbr', 'Sabra18G0091700' => 'sbr', 'Sabra19G0095400' => 'sbr', 'SalBow6G3080' => 'sbo', 'SalBow7G1157' => 'sbo', 'SalBow7G2123' => 'sbo', 'SalBow7G2285' => 'sbo', 'SalBow7G3537' => 'sbo', 'SalBow8G2947' => 'sbo', 'SalBow8G4463' => 'sbo', 'SalBow8G5466' => 'sbo', 'Sc01g0001750' => 'sci', 'Sc02g0006640' => 'sci', 'Sc02g0006670' => 'sci', 'Sc04g0008220' => 'sci', 'Sc05g0006190' => 'sci', 'Sc08g0002760' => 'sci', 'Sc17g0006170' => 'sci', 'Sc22g0002050' => 'sci', 'Sc23g0001190' => 'sci', 'Sc24g0000980' => 'sci', 'Sed0006245' => 'sed', 'Sed0007543' => 'sed', 'Sed0009411' => 'sed', 'Sed0010765' => 'sed', 'Sed0012944' => 'sed', 'Sed0014682' => 'sed', 'Sed0016174' => 'sed', 'Sed0016796' => 'sed', 'Sed0020317' => 'sed', 'Sed0021467' => 'sed', 'SEGI_01316' => 'sgi', 'SEGI_03374' => 'sgi', 'SEGI_16265' => 'sgi', 'SEGI_18569' => 'sgi', 'SEGI_20351' => 'sgi', 'SEGI_26395' => 'sgi', 'SEGI_29469' => 'sgi', 'SEGI_34771' => 'sgi', 'SEGI_36769' => 'sgi', 'SEGI_37139' => 'sgi', 'SGA_v2.0_scaffold100G29687' => 'sas', 'SGA_v2.0_scaffold118G32472' => 'sas', 'SGA_v2.0_scaffold14G07051' => 'sas', 'SGA_v2.0_scaffold183G39845' => 'sas', 'SGA_v2.0_scaffold1G00174' => 'sas', 'SGA_v2.0_scaffold22G09714' => 'sas', 'SGA_v2.0_scaffold333G48992' => 'sas', 'SGA_v2.0_scaffold46G17491' => 'sas', 'SGA_v2.0_scaffold49G18294' => 'sas', 'SGA_v2.0_scaffold63G21658' => 'sas', 'SHI01741' => 'shi', 'SHI05771' => 'shi', 'SHI18077' => 'shi', 'SHI20525' => 'shi', 'SHI20527' => 'shi', 'SHI20528' => 'shi', 'SMO172G0185' => 'smo', 'SMO198G0020' => 'smo', 'SMO351G0006' => 'smo', 'SMO356G0118' => 'smo', 'SMO358G0296' => 'smo', 'SMO367G0079' => 'smo', 'SMO367G1277' => 'smo', 'Solyc01g014220.3' => 'sly', 'Solyc01g111770.2' => 'sly', 'Solyc02g078180.3' => 'sly', 'Solyc03g006430.3' => 'sly', 'Solyc03g006456.1' => 'sly', 'Solyc03g079860.2' => 'sly', 'Solyc04g079770.3' => 'sly', 'Solyc05g007430.4' => 'sly', 'Solyc07g063150.3' => 'sly', 'Solyc08g016620.3' => 'sly', 'Solyc09g057590.3' => 'sly', 'Solyc09g057600.1' => 'sly', 'Solyc10g009050.3' => 'sly', 'Solyc11g017420.2' => 'sly', 'Sopen01g053810' => 'spe', 'Sopen02g023040' => 'spe', 'Sopen03g002440' => 'spe', 'Sopen04g033350' => 'spe', 'Sopen05g003310' => 'spe', 'Sopen07g004050' => 'spe', 'Sopen07g031340' => 'spe', 'Sopen08g006990' => 'spe', 'Sopen10g004830' => 'spe', 'Sopen11g009370' => 'spe', 'Sp1g24450' => 'spa', 'Sp1g29670' => 'spa', 'Sp1g39600' => 'spa', 'Sp2g11080' => 'spa', 'Sp2g13970' => 'spa', 'Sp4g16130' => 'spa', 'Sp6g13080' => 'spa', 'Sp7g37270' => 'spa', 'TAR371G0065' => 'tar', 'TAR376G0340' => 'tar', 'TAR376G0435' => 'tar', 'TAR381G0002' => 'tar', 'TAR381G1236' => 'tar', 'TAR624G0055' => 'tar', 'TAR624G0324' => 'tar', 'TAR624G0696' => 'tar', 'TAR624G0906' => 'tar', 'TAR625G0107' => 'tar', 'TAR626G0015' => 'tar', 'TAR626G1356' => 'tar', 'TAR627G0888' => 'tar', 'TAR628G0399' => 'tar', 'TAR628G1327' => 'tar', 'TAR629G2831' => 'tar', 'TAR629G2874' => 'tar', 'TAR633G1432' => 'tar', 'TAR633G2771' => 'tar', 'THA.LOC104803394' => 'tha', 'THA.LOC104805153' => 'tha', 'THA.LOC104806784' => 'tha', 'THA.LOC104810473' => 'tha', 'THA.LOC104813100' => 'tha', 'THA.LOC104814215' => 'tha', 'THA.LOC104815554' => 'tha', 'THA.LOC104820544' => 'tha', 'THA.LOC104824754' => 'tha', 'THA.LOC104827717' => 'tha', 'Thecc.02G031400' => 'tca', 'Thecc.02G055900' => 'tca', 'Thecc.02G350800' => 'tca', 'Thecc.06G150900' => 'tca', 'Thecc.06G186600' => 'tca', 'Thecc.07G089600' => 'tca', 'Thecc.08G020400' => 'tca', 'Thecc.08G182100' => 'tca', 'Thhalv10000873m.g' => 'esa', 'Thhalv10004185m.g' => 'esa', 'Thhalv10006981m.g' => 'esa', 'Thhalv10007204m.g' => 'esa', 'Thhalv10011374m.g' => 'esa', 'Thhalv10013482m.g' => 'esa', 'Thhalv10017801m.g' => 'esa', 'Thhalv10024983m.g' => 'esa', 'TPR.G12072' => 'tpr', 'TPR.G15769' => 'tpr', 'TPR.G16504' => 'tpr', 'TPR.G16506' => 'tpr', 'TPR.G24345' => 'tpr', 'TPR.G26666' => 'tpr', 'TPR.G27320' => 'tpr', 'TPR.G31819' => 'tpr', 'TPR.G38879' => 'tpr', 'TPR.G39015' => 'tpr', 'TPR.G8819' => 'tpr', 'TWI09G0924' => 'twi', 'TWI12G0811' => 'twi', 'TWI12G1294' => 'twi', 'TWI31G0150' => 'twi', 'TWI36G1262' => 'twi', 'TWI38G1287' => 'twi', 'TWI38G1633' => 'twi', 'TWI38G1982' => 'twi', 'TWI39G0116' => 'twi', 'TWI60G1011' => 'twi', 'TWI63G0171' => 'twi', 'TWI73G0839' => 'twi', 'TWI79G1511' => 'twi', 'unitig_0.g915' => 'ugi', 'unitig_0.g916' => 'ugi', 'unitig_21.g20219' => 'ugi', 'unitig_21.g20416' => 'ugi', 'unitig_578.g16132' => 'ugi', 'unitig_578.g16718' => 'ugi', 'unitig_62.g23481' => 'ugi', 'unitig_744.g24535' => 'ugi', 'unitig_749.g13525' => 'ugi', 'vmacro01248' => 'vma', 'vmacro02290' => 'vma', 'vmacro10946' => 'vma', 'vmacro11865' => 'vma', 'vmacro12493' => 'vma', 'vmacro17322' => 'vma', 'vmacro21599' => 'vma', 'vmacro23041' => 'vma', 'VMungo0251G0004' => 'vmu', 'VMungo0251G2639' => 'vmu', 'VMungo0251G2967' => 'vmu', 'VMungo0540G0864' => 'vmu', 'VMungo0540G1569' => 'vmu', 'VMungo0647G0317' => 'vmu', 'VMungo0720G1373' => 'vmu', 'VMungo0720G1508' => 'vmu', 'VMungo1080G0485' => 'vmu', 'VMungo1215G3177' => 'vmu', 'Zm00001eb112600' => 'zma', 'Zm00001eb120220' => 'zma', 'Zm00001eb153240' => 'zma', 'Zm00001eb168880' => 'zma', 'Zm00001eb213920' => 'zma', 'Zm00001eb228280' => 'zma', 'Zm00001eb254580' => 'zma', 'Zm00001eb272180' => 'zma', 'Zm00001eb293190' => 'zma', 'Zm00001eb322930' => 'zma', 'Zm00001eb353360' => 'zma', 'Zm00001eb353390' => 'zma', 'Zm00001eb353430' => 'zma', 'Zm00001eb353440' => 'zma', 'Zm00001eb353780' => 'zma' ), 'gf_id' => 'HOM05D000499', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000499' ), 'data_identifier' => 'HOM05D000499', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000499', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1066', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p29780' => 'bna', 'A02p33180' => 'bna', 'A03p16470' => 'bna', 'A03p66010' => 'bna', 'A04p25970' => 'bna', 'A06p01270' => 'bna', 'A06p46080' => 'bna', 'A07p11400' => 'bna', 'A08p01840' => 'bna', 'A08p08230' => 'bna', 'A08p25740' => 'bna', 'A09p32070' => 'bna', 'A09p37830' => 'bna', 'A09p42840' => 'bna', 'A09p42850' => 'bna', 'Aa31LG10G2060' => 'aar', 'Aa31LG2G7410' => 'aar', 'Aa31LG6G10200' => 'aar', 'Aa31LG6G16680' => 'aar', 'Aa31LG6G8470' => 'aar', 'Aa31LG9G12730' => 'aar', 'Aa31LG9G13680' => 'aar', 'Aa31LG9G14920' => 'aar', 'Aa31LG9G6650' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4977' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5467' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3254' => 'aag', 'Actinidia02578' => 'ach', 'Actinidia07693' => 'ach', 'Actinidia08413' => 'ach', 'Actinidia08414' => 'ach', 'Actinidia15289' => 'ach', 'Actinidia19871' => 'ach', 'Actinidia21475' => 'ach', 'Actinidia22576' => 'ach', 'Actinidia28327' => 'ach', 'Actinidia32491' => 'ach', 'Actinidia39463' => 'ach', 'Actinidia39571' => 'ach', 'Ah.01g013750' => 'amhyb', 'Ah.01g023210' => 'amhyb', 'Ah.04g164850' => 'amhyb', 'Ah.05g178060' => 'amhyb', 'Ah.07g204270' => 'amhyb', 'Ah.07g208480' => 'amhyb', 'Ah.09g237410' => 'amhyb', 'Ah.14g089460' => 'amhyb', 'AL1G41790' => 'aly', 'AL1G49050' => 'aly', 'AL1G53810' => 'aly', 'AL1G61400' => 'aly', 'AL4G18580' => 'aly', 'AL5G12510' => 'aly', 'AL5G12540' => 'aly', 'AL6G43230' => 'aly', 'AL7G10370' => 'aly', 'AL7G19250' => 'aly', 'AL8G12240' => 'aly', 'AL8G18540' => 'aly', 'Aqoxy1G02409' => 'aox', 'Aqoxy2G03993' => 'aox', 'Aqoxy3G03357' => 'aox', 'Aqoxy4G00785' => 'aox', 'Aqoxy5G02598' => 'aox', 'Aqoxy6G00132' => 'aox', 'Aqoxy7G01776' => 'aox', 'Aqoxy7G02316' => 'aox', 'Aqoxy7G03973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.12AFKW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B8730' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27IQR1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3F75VG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3RE0GA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41TCQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.527VTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FIR39' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5W8UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DA38EV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ63HS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H1I32C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HC27T5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4M8AP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7N3CZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9UVDZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LS1NQA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT1D4B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SKC4TM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCFV76' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF9Q1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQWD9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1ZM88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WE07RT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YCK7VH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJE6Q6' => 'arhy', 'AT1G28240' => 'ath', 'AT1G34550' => 'ath', 'AT1G53040' => 'ath', 'AT2G02910' => 'ath', 'AT4G09630' => 'ath', 'AT4G38500' => 'ath', 'AT5G42660' => 'ath', 'AT5G46220' => 'ath', 'ATR0152G026' => 'atr', 'ATR0564G343' => 'atr', 'ATR0706G151' => 'atr', 'ATR0733G207' => 'atr', 'ATR0751G234' => 'atr', 'ATR0807G048' => 'atr', 'ATR1091G084' => 'atr', 'Atru.chr10.1229' => 'acertr', 'Atru.chr10.1230' => 'acertr', 'Atru.chr10.1874' => 'acertr', 'Atru.chr11.1808' => 'acertr', 'Atru.chr13.1795' => 'acertr', 'Atru.chr13.570' => 'acertr', 'Atru.chr2.2608' => 'acertr', 'Atru.chr2.2609' => 'acertr', 'Atru.chr5.3428' => 'acertr', 'Atru.chr8.1171' => 'acertr', 'AUR62004651' => 'cqu', 'AUR62008675' => 'cqu', 'AUR62010014' => 'cqu', 'AUR62013004' => 'cqu', 'AUR62014825' => 'cqu', 'AUR62015015' => 'cqu', 'AUR62015151' => 'cqu', 'AUR62017020' => 'cqu', 'AUR62019422' => 'cqu', 'AUR62023570' => 'cqu', 'AUR62025571' => 'cqu', 'AUR62029098' => 'cqu', 'AUR62033863' => 'cqu', 'AUR62034296' => 'cqu', 'AUR62040075' => 'cqu', 'BcaB02g07334' => 'bca', 'BcaB02g10575' => 'bca', 'BcaB03g12119' => 'bca', 'BcaB03g12120' => 'bca', 'BcaB03g13945' => 'bca', 'BcaB04g17123' => 'bca', 'BcaB04g17867' => 'bca', 'BcaB04g19839' => 'bca', 'BcaB07g30317' => 'bca', 'BcaB07g32432' => 'bca', 'BcaB07g33362' => 'bca', 'BcaB08g36611' => 'bca', 'BcaC01g00028' => 'bca', 'BcaC01g01356' => 'bca', 'BcaC01g02034' => 'bca', 'BcaC01g06051' => 'bca', 'BcaC03g16839' => 'bca', 'BcaC03g17176' => 'bca', 'BcaC05g26829' => 'bca', 'BcaC06g31490' => 'bca', 'BcaC06g35344' => 'bca', 'BcaC06g36570' => 'bca', 'BcaC07g37537' => 'bca', 'BcaC08g43491' => 'bca', 'BcaC08g43773' => 'bca', 'BcaNung00234' => 'bca', 'BcaNung01982' => 'bca', 'BcaNung03707' => 'bca', 'BcaNung06454' => 'bca', 'BolC2t10762H' => 'bol', 'BolC2t11191H' => 'bol', 'BolC3t14322H' => 'bol', 'BolC3t19747H' => 'bol', 'BolC3t21425H' => 'bol', 'BolC4t27800H' => 'bol', 'BolC5t31423H' => 'bol', 'BolC6t35951H' => 'bol', 'BolC6t36282H' => 'bol', 'BolC7t40678H' => 'bol', 'BolC7t40679H' => 'bol', 'BolC7t42222H' => 'bol', 'BolC7t43492H' => 'bol', 'BolC7t46785H' => 'bol', 'BolC8t47853H' => 'bol', 'BolC9t56805H' => 'bol', 'BraA02t08000Z' => 'bra', 'BraA02t08341Z' => 'bra', 'BraA03t10936Z' => 'bra', 'BraA03t15657Z' => 'bra', 'BraA04t18100Z' => 'bra', 'BraA05t20523Z' => 'bra', 'BraA06t23353Z' => 'bra', 'BraA06t27473Z' => 'bra', 'BraA06t27769Z' => 'bra', 'BraA07t28928Z' => 'bra', 'BraA08t32236Z' => 'bra', 'BraA08t32841Z' => 'bra', 'BraA08t34524Z' => 'bra', 'BraA09t38742Z' => 'bra', 'BraA09t39295Z' => 'bra', 'C02p47180' => 'bna', 'C02p50990' => 'bna', 'C03p19360' => 'bna', 'C03p74950' => 'bna', 'C03p91000' => 'bna', 'C04p63260' => 'bna', 'C05p27050' => 'bna', 'C06p08750' => 'bna', 'C06p11490' => 'bna', 'C07p02820' => 'bna', 'C07p17180' => 'bna', 'C07p29440' => 'bna', 'C07p63730' => 'bna', 'C09p39260' => 'bna', 'CAN.G1164.34' => 'can', 'CAN.G1164.39' => 'can', 'CAN.G1530.3' => 'can', 'CAN.G162.61' => 'can', 'CAN.G176.6' => 'can', 'CAN.G289.49' => 'can', 'CAN.G370.21' => 'can', 'CAN.G370.22' => 'can', 'CAN.G371.117' => 'can', 'CAN.G58.37' => 'can', 'CAN.G588.98' => 'can', 'CANSAT21G2266' => 'cansat', 'CANSAT25G2799' => 'cansat', 'CANSAT35G0862' => 'cansat', 'CANSAT35G1704' => 'cansat', 'CANSAT35G1760' => 'cansat', 'CANSAT56G3971' => 'cansat', 'CANSAT56G4116' => 'cansat', 'CANSAT80G1259' => 'cansat', 'CARHR027730' => 'chi', 'CARHR033880' => 'chi', 'CARHR043270' => 'chi', 'CARHR145330' => 'chi', 'CARHR145340' => 'chi', 'CARHR175570' => 'chi', 'CARHR181570' => 'chi', 'CARHR258470' => 'chi', 'CARHR260490' => 'chi', 'CARHR294220' => 'chi', 'Carub.0001s2668' => 'cru', 'Carub.0001s3257' => 'cru', 'Carub.0001s4220' => 'cru', 'Carub.0005s0179' => 'cru', 'Carub.0006s2807' => 'cru', 'Carub.0007s0039' => 'cru', 'Carub.0008s0169' => 'cru', 'Carub.0008s0636' => 'cru', 'Ca_00338_v3' => 'car', 'Ca_00542_v3' => 'car', 'Ca_01844_v3' => 'car', 'Ca_10611_v3' => 'car', 'Ca_13326_v3' => 'car', 'Ca_17944_v3' => 'car', 'Ca_18546_v3' => 'car', 'Ca_24219_v3' => 'car', 'Ca_29972_v3' => 'car', 'CBR_g3681' => 'cbr', 'CBR_g40021' => 'cbr', 'Cc01_g08140' => 'ccan', 'Cc02_g13410' => 'ccan', 'Cc02_g37480' => 'ccan', 'Cc05_g12030' => 'ccan', 'Cc09_g03370' => 'ccan', 'Cc09_g10300' => 'ccan', 'Cc10_g03530' => 'ccan', 'Cc10_g11380' => 'ccan', 'CDE01G0176' => 'cde', 'CDE02G0675' => 'cde', 'CDE02G0942' => 'cde', 'CDE02G1153' => 'cde', 'CDE02G4177' => 'cde', 'CDE04G2117' => 'cde', 'CDE04G2736' => 'cde', 'CDE08G1161' => 'cde', 'CDE09G1238' => 'cde', 'Cfa000467' => 'cfa', 'Cfa000947' => 'cfa', 'Cfa004969' => 'cfa', 'Cfa005284' => 'cfa', 'Cfa008993' => 'cfa', 'Cfa018187' => 'cfa', 'Cfa018454' => 'cfa', 'Cfa020585' => 'cfa', 'Ciclev10000424m.g' => 'ccl', 'Ciclev10003605m.g' => 'ccl', 'Ciclev10007828m.g' => 'ccl', 'Ciclev10014620m.g' => 'ccl', 'Ciclev10015169m.g' => 'ccl', 'Ciclev10018291m.g' => 'ccl', 'Ciclev10028256m.g' => 'ccl', 'Ciclev10033822m.g' => 'ccl', 'CiPaw.05G060300' => 'cil', 'CiPaw.05G085000' => 'cil', 'CiPaw.06G083700' => 'cil', 'CiPaw.06G120300' => 'cil', 'CiPaw.09G060500' => 'cil', 'CiPaw.09G123800' => 'cil', 'CiPaw.11G169700' => 'cil', 'CiPaw.12G118300' => 'cil', 'CiPaw.15G071000' => 'cil', 'CiPaw.15G081900' => 'cil', 'ClCG01G024610' => 'cla', 'ClCG03G006070' => 'cla', 'ClCG05G019250' => 'cla', 'ClCG09G009500' => 'cla', 'ClCG11G008200' => 'cla', 'ClCG11G018080' => 'cla', 'COL.COLO4_17373' => 'col', 'COL.COLO4_22994' => 'col', 'COL.COLO4_26389' => 'col', 'COL.COLO4_27170' => 'col', 'COL.COLO4_31074' => 'col', 'COL.COLO4_31465' => 'col', 'COL.COLO4_36438' => 'col', 'COL.COLO4_36439' => 'col', 'Cpa.g.c38781' => 'cpa', 'Cpa.g.sc128.12' => 'cpa', 'Cpa.g.sc166.7' => 'cpa', 'Cpa.g.sc166.8' => 'cpa', 'Cpa.g.sc20.111' => 'cpa', 'Cpa.g.sc27.31' => 'cpa', 'Cpa.g.sc64.36' => 'cpa', 'Cpa.g.sc64.37' => 'cpa', 'Cpa.g.sc66.49' => 'cpa', 'Cpa.g.sc80.64' => 'cpa', 'CsaV3_1G012320' => 'csa', 'CsaV3_2G008480' => 'csa', 'CsaV3_2G033450' => 'csa', 'CsaV3_3G044830' => 'csa', 'CsaV3_4G033710' => 'csa', 'CsaV3_6G051730' => 'csa', 'CsaV3_7G025350' => 'csa', 'CSS0001067' => 'camsi', 'CSS0005996' => 'camsi', 'CSS0006590' => 'camsi', 'CSS0009673' => 'camsi', 'CSS0010201' => 'camsi', 'CSS0010549' => 'camsi', 'CSS0011364' => 'camsi', 'CSS0014473' => 'camsi', 'CSS0014961' => 'camsi', 'CSS0020191' => 'camsi', 'CSS0021165' => 'camsi', 'CSS0022306' => 'camsi', 'CSS0030591' => 'camsi', 'CSS0030696' => 'camsi', 'CSS0032653' => 'camsi', 'CSS0037487' => 'camsi', 'CSS0041102' => 'camsi', 'CSS0041261' => 'camsi', 'CSS0046246' => 'camsi', 'CSS0049256' => 'camsi', 'DCAR_004075' => 'dca', 'DCAR_011538' => 'dca', 'DCAR_019553' => 'dca', 'DCAR_020952' => 'dca', 'DCAR_021739' => 'dca', 'DCAR_027407' => 'dca', 'DCAR_027913' => 'dca', 'DCAR_028066' => 'dca', 'Dinv05899' => 'din', 'Dinv07563' => 'din', 'Dinv08010' => 'din', 'Dinv14125' => 'din', 'Dinv20172' => 'din', 'Dinv30743' => 'din', 'Dinv31229' => 'din', 'Dinv34162' => 'din', 'Dinv36028' => 'din', 'Dinv39368' => 'din', 'Dinv40565' => 'din', 'Dinv41706' => 'din', 'Duzib052G0089' => 'dzi', 'Duzib116G0641' => 'dzi', 'Duzib132G0069' => 'dzi', 'Duzib132G1219' => 'dzi', 'Duzib147G0278' => 'dzi', 'Duzib160G0480' => 'dzi', 'Duzib170G0661' => 'dzi', 'Duzib177G0591' => 'dzi', 'Duzib187G1353' => 'dzi', 'Duzib192G0858' => 'dzi', 'Duzib192G0883' => 'dzi', 'Duzib213G0506' => 'dzi', 'Duzib235G0289' => 'dzi', 'Duzib251G0422' => 'dzi', 'ECA232G3898' => 'eca', 'ECA233G5950' => 'eca', 'ECA234G1699' => 'eca', 'ECA234G2421' => 'eca', 'ECA236G0426' => 'eca', 'ECA236G4331' => 'eca', 'ECA248G2573' => 'eca', 'EL10Ac1g00077' => 'bvu', 'EL10Ac1g01746' => 'bvu', 'EL10Ac2g03464' => 'bvu', 'EL10Ac4g08176' => 'bvu', 'EL10Ac7g17521' => 'bvu', 'EL10Ac8g20386' => 'bvu', 'EL10Ac9g21343' => 'bvu', 'EL10Ac9g22688' => 'bvu', 'Eucgr.B03434' => 'egr', 'Eucgr.D00618' => 'egr', 'Eucgr.E02395' => 'egr', 'Eucgr.F01129' => 'egr', 'Eucgr.F02622' => 'egr', 'Eucgr.F04207' => 'egr', 'FAN01G0570' => 'fan', 'FAN03G3351' => 'fan', 'FAN06G3702' => 'fan', 'FAN07G2149' => 'fan', 'FAN10G3758' => 'fan', 'FAN11G1170' => 'fan', 'FAN11G2050' => 'fan', 'FAN11G2724' => 'fan', 'FAN12G1700' => 'fan', 'FAN12G2028' => 'fan', 'FAN15G1160' => 'fan', 'FAN15G3063' => 'fan', 'FAN16G2540' => 'fan', 'FAN16G3077' => 'fan', 'FAN16G3624' => 'fan', 'FAN17G0221' => 'fan', 'FAN20G2492' => 'fan', 'FAN20G2905' => 'fan', 'FAN21G0548' => 'fan', 'FAN21G1300' => 'fan', 'FAN22G0077' => 'fan', 'FAN22G1315' => 'fan', 'FAN24G1280' => 'fan', 'FAN24G1445' => 'fan', 'FAN24G3527' => 'fan', 'FAN25G0464' => 'fan', 'FAN25G2885' => 'fan', 'FAN25G3270' => 'fan', 'FAN27G1101' => 'fan', 'FAN27G2846' => 'fan', 'FAN27G3524' => 'fan', 'FvH4_2g11770' => 'fve', 'FvH4_2g15630' => 'fve', 'FvH4_3g05570' => 'fve', 'FvH4_3g09110' => 'fve', 'FvH4_3g19940' => 'fve', 'FvH4_4g04821' => 'fve', 'FvH4_4g31480' => 'fve', 'FvH4_7g01740' => 'fve', 'Glyma.05G130400' => 'gma', 'Glyma.05G156400' => 'gma', 'Glyma.07G197000' => 'gma', 'Glyma.08G085151' => 'gma', 'Glyma.08G114500' => 'gma', 'Glyma.08G300400' => 'gma', 'Glyma.10G215800' => 'gma', 'Glyma.12G224400' => 'gma', 'Glyma.13G179300' => 'gma', 'Glyma.13G218151' => 'gma', 'Glyma.13G238800' => 'gma', 'Glyma.13G276900' => 'gma', 'Glyma.14G078200' => 'gma', 'Glyma.15G074500' => 'gma', 'Glyma.15G094100' => 'gma', 'Glyma.17G247200' => 'gma', 'Glyma.18G120100' => 'gma', 'Glyma.20G176000' => 'gma', 'Gohir.A01G063600' => 'ghi', 'Gohir.A01G170301' => 'ghi', 'Gohir.A02G060500' => 'ghi', 'Gohir.A05G133850' => 'ghi', 'Gohir.A05G161400' => 'ghi', 'Gohir.A06G012900' => 'ghi', 'Gohir.A06G035901' => 'ghi', 'Gohir.A06G127100' => 'ghi', 'Gohir.A06G210500' => 'ghi', 'Gohir.A08G008650' => 'ghi', 'Gohir.A09G072700' => 'ghi', 'Gohir.A09G088301' => 'ghi', 'Gohir.A10G040600' => 'ghi', 'Gohir.A12G036300' => 'ghi', 'Gohir.A12G143350' => 'ghi', 'Gohir.A12G165500' => 'ghi', 'Gohir.A13G145700' => 'ghi', 'Gohir.D01G050000' => 'ghi', 'Gohir.D01G051366' => 'ghi', 'Gohir.D01G161350' => 'ghi', 'Gohir.D02G065900' => 'ghi', 'Gohir.D05G164200' => 'ghi', 'Gohir.D05G355500' => 'ghi', 'Gohir.D06G010400' => 'ghi', 'Gohir.D06G111250' => 'ghi', 'Gohir.D06G132000' => 'ghi', 'Gohir.D06G210500' => 'ghi', 'Gohir.D07G165675' => 'ghi', 'Gohir.D08G062240' => 'ghi', 'Gohir.D08G086101' => 'ghi', 'Gohir.D08G138060' => 'ghi', 'Gohir.D09G072300' => 'ghi', 'Gohir.D10G041400' => 'ghi', 'Gohir.D11G191020' => 'ghi', 'Gohir.D11G212066' => 'ghi', 'Gohir.D12G036300' => 'ghi', 'Gohir.D12G168600' => 'ghi', 'Gohir.D13G150600' => 'ghi', 'Gorai.001G057300' => 'gra', 'Gorai.002G069900' => 'gra', 'Gorai.002G200000' => 'gra', 'Gorai.003G067600' => 'gra', 'Gorai.005G074800' => 'gra', 'Gorai.006G087300' => 'gra', 'Gorai.008G037500' => 'gra', 'Gorai.008G181400' => 'gra', 'Gorai.009G169400' => 'gra', 'Gorai.009G387900' => 'gra', 'Gorai.010G013300' => 'gra', 'Gorai.010G153800' => 'gra', 'Gorai.010G255800' => 'gra', 'Gorai.011G043700' => 'gra', 'Gorai.011G198900' => 'gra', 'Gorai.013G168400' => 'gra', 'GSVIVG01005212001' => 'vvi', 'GSVIVG01006163001' => 'vvi', 'GSVIVG01009625001' => 'vvi', 'GSVIVG01014338001' => 'vvi', 'GSVIVG01020005001' => 'vvi', 'GSVIVG01021450001' => 'vvi', 'GSVIVG01023975001' => 'vvi', 'GSVIVG01034490001' => 'vvi', 'HanXRQChr04g0112071' => 'han', 'HanXRQChr05g0131151' => 'han', 'HanXRQChr09g0262371' => 'han', 'HanXRQChr09g0268401' => 'han', 'HanXRQChr10g0279241' => 'han', 'HanXRQChr10g0297961' => 'han', 'HanXRQChr11g0326231' => 'han', 'HanXRQChr11g0328471' => 'han', 'HanXRQChr16g0507941' => 'han', 'HanXRQChr17g0560211' => 'han', 'Haze_02108' => 'cav', 'Haze_02428' => 'cav', 'Haze_05593' => 'cav', 'Haze_06448' => 'cav', 'Haze_09427' => 'cav', 'Haze_12022' => 'cav', 'Haze_17612' => 'cav', 'Haze_17928' => 'cav', 'Hma1.2p1_0032F.1_g019250' => 'hma', 'Hma1.2p1_0163F.1_g072690' => 'hma', 'Hma1.2p1_0265F.1_g106710' => 'hma', 'Hma1.2p1_0286F.1_g113970' => 'hma', 'Hma1.2p1_0363F.1_g136640' => 'hma', 'Hma1.2p1_0584F.1_g183470' => 'hma', 'Hma1.2p1_0885F.1_g232570' => 'hma', 'HPP92_006022' => 'vpl', 'HPP92_007320' => 'vpl', 'HPP92_011521' => 'vpl', 'HPP92_019387' => 'vpl', 'HPP92_024038' => 'vpl', 'Hund05891' => 'sun', 'Hund06450' => 'sun', 'Hund12053' => 'sun', 'Hund16800' => 'sun', 'Hund21222' => 'sun', 'Hund22896' => 'sun', 'Hund23746' => 'sun', 'Hund27083' => 'sun', 'Lalb_Chr02g0141831' => 'lal', 'Lalb_Chr02g0141841' => 'lal', 'Lalb_Chr05g0220411' => 'lal', 'Lalb_Chr06g0162081' => 'lal', 'Lalb_Chr09g0327651' => 'lal', 'Lalb_Chr13g0295051' => 'lal', 'Lalb_Chr15g0086801' => 'lal', 'Lalb_Chr16g0383781' => 'lal', 'Lalb_Chr16g0383791' => 'lal', 'Lalb_Chr18g0055441' => 'lal', 'Lalb_Chr18g0059611' => 'lal', 'Lalb_Chr20g0109661' => 'lal', 'Lalb_Chr20g0109831' => 'lal', 'Lalb_Chr20g0121871' => 'lal', 'Lalb_Chr22g0355361' => 'lal', 'Lalb_Chr25g0286371' => 'lal', 'Lj1A1187G43' => 'lonja', 'Lj1A1205T50' => 'lonja', 'Lj1A800G33' => 'lonja', 'Lj1C1187T7' => 'lonja', 'Lj1C843T11' => 'lonja', 'Lj1g0010940' => 'lja', 'Lj2A288T69' => 'lonja', 'Lj3g0024276' => 'lja', 'Lj4A47T76' => 'lonja', 'Lj4g0005805' => 'lja', 'Lj4g0006097' => 'lja', 'Lj4g0008528' => 'lja', 'Lj4g0024907' => 'lja', 'Lj5g0012472' => 'lja', 'Lj5g0018648' => 'lja', 'Lj6C789G1' => 'lonja', 'Lj6g0004000' => 'lja', 'Lj7A292G67' => 'lonja', 'Lj7A292T64' => 'lonja', 'Lj9A400T58' => 'lonja', 'Lsat_1_v5_gn_1_126181' => 'lsa', 'Lsat_1_v5_gn_4_123041' => 'lsa', 'Lsat_1_v5_gn_4_133620' => 'lsa', 'Lsat_1_v5_gn_4_53221' => 'lsa', 'Lsat_1_v5_gn_4_71961' => 'lsa', 'Lsat_1_v5_gn_7_105241' => 'lsa', 'Lsat_1_v5_gn_7_21361' => 'lsa', 'Lsat_1_v5_gn_7_28860' => 'lsa', 'Lsat_1_v5_gn_7_31260' => 'lsa', 'Lsat_1_v5_gn_8_52801' => 'lsa', 'Manes.02G191400' => 'mes', 'Manes.03G110100' => 'mes', 'Manes.04G071100' => 'mes', 'Manes.05G100500' => 'mes', 'Manes.05G164700' => 'mes', 'Manes.15G087000' => 'mes', 'Manes.15G121500' => 'mes', 'Manes.16G028300' => 'mes', 'Manes.17G046100' => 'mes', 'Manes.17G069800' => 'mes', 'Manes.18G100500' => 'mes', 'Mapoly0002s0109' => 'mpo', 'Mapoly0024s0007' => 'mpo', 'Mapoly0089s0032' => 'mpo', 'MBI04_g42241_MAGBIO' => 'mbi', 'MBI05_g11988_MAGBIO' => 'mbi', 'MBI05_g35452_MAGBIO' => 'mbi', 'MBI07_g30179_MAGBIO' => 'mbi', 'MBI07_g35859_MAGBIO' => 'mbi', 'MBI07_g35860_MAGBIO' => 'mbi', 'MBI07_g37166_MAGBIO' => 'mbi', 'MBI08_g18172_MAGBIO' => 'mbi', 'MBI09_g08441_MAGBIO' => 'mbi', 'MBI13_g01676_MAGBIO' => 'mbi', 'MBI14_g42955_MAGBIO' => 'mbi', 'MBI16_g13161_MAGBIO' => 'mbi', 'MBI17_g27204_MAGBIO' => 'mbi', 'MBI19_g21595_MAGBIO' => 'mbi', 'MD00G1148400' => 'mdo', 'MD02G1301200' => 'mdo', 'MD03G1227800' => 'mdo', 'MD05G1041100' => 'mdo', 'MD05G1124800' => 'mdo', 'MD05G1284000' => 'mdo', 'MD05G1338800' => 'mdo', 'MD05G1338900' => 'mdo', 'MD07G1022800' => 'mdo', 'MD10G1047500' => 'mdo', 'MD10G1127500' => 'mdo', 'MD10G1262300' => 'mdo', 'MD10G1293800' => 'mdo', 'MD16G1074300' => 'mdo', 'Medtr1g021670' => 'mtr', 'Medtr1g096320' => 'mtr', 'Medtr2g013690' => 'mtr', 'Medtr2g019450' => 'mtr', 'Medtr2g085170' => 'mtr', 'Medtr4g088785' => 'mtr', 'Medtr8g055930' => 'mtr', 'Medtr8g085850' => 'mtr', 'MELO3C002605.2' => 'cme', 'MELO3C003891.2' => 'cme', 'MELO3C004012.2' => 'cme', 'MELO3C007134.2' => 'cme', 'MELO3C008118.2' => 'cme', 'MELO3C016700.2' => 'cme', 'MELO3C024127.2' => 'cme', 'MELO3C033361.2' => 'cme', 'MELO3C033362.2' => 'cme', 'Migut.C00430' => 'egut', 'Migut.C01246' => 'egut', 'Migut.E00101' => 'egut', 'Migut.H01486' => 'egut', 'Migut.H01939' => 'egut', 'Migut.K00360' => 'egut', 'Migut.M00910' => 'egut', 'Migut.M01139' => 'egut', 'Migut.N02677' => 'egut', 'MSTRG.13252' => 'ama', 'MSTRG.14701' => 'ama', 'MSTRG.1521' => 'ama', 'MSTRG.15884' => 'ama', 'MSTRG.16242' => 'ama', 'MSTRG.22285' => 'ama', 'MSTRG.22444' => 'ama', 'MSTRG.2349' => 'ama', 'MSTRG.26308' => 'ama', 'MSTRG.28296' => 'ama', 'MSTRG.9895' => 'ama', 'Nitab4.5_0000110g0060' => 'nta', 'Nitab4.5_0000420g0130' => 'nta', 'Nitab4.5_0000422g0030' => 'nta', 'Nitab4.5_0000560g0180' => 'nta', 'Nitab4.5_0000703g0100' => 'nta', 'Nitab4.5_0000786g0200' => 'nta', 'Nitab4.5_0001336g0020' => 'nta', 'Nitab4.5_0001796g0030' => 'nta', 'Nitab4.5_0003348g0060' => 'nta', 'Nitab4.5_0003698g0040' => 'nta', 'Nitab4.5_0003942g0090' => 'nta', 'Nitab4.5_0004775g0070' => 'nta', 'Nitab4.5_0004864g0030' => 'nta', 'Nitab4.5_0005615g0020' => 'nta', 'Nitab4.5_0009288g0030' => 'nta', 'Nitab4.5_0009341g0010' => 'nta', 'Nitab4.5_0009535g0010' => 'nta', 'Nn1g03995' => 'nnu', 'Nn1g04100' => 'nnu', 'Nn1g06530' => 'nnu', 'Nn3g16404' => 'nnu', 'Nn3g17212' => 'nnu', 'Nn3g20776' => 'nnu', 'Nn3g21923' => 'nnu', 'Nn5g27737' => 'nnu', 'Nn5g29461' => 'nnu', 'Nn7g38355' => 'nnu', 'Nn8g39873' => 'nnu', 'Oeu000548.2' => 'oeu', 'Oeu004672.1' => 'oeu', 'Oeu015605.2' => 'oeu', 'Oeu016092.1' => 'oeu', 'Oeu017879.3' => 'oeu', 'Oeu024910.1' => 'oeu', 'Oeu028965.1' => 'oeu', 'Oeu031269.1' => 'oeu', 'Oeu031270.1' => 'oeu', 'Oeu032535.1' => 'oeu', 'Oeu034151.1' => 'oeu', 'Oeu034152.1' => 'oeu', 'Oeu034588.2' => 'oeu', 'Oeu050846.1' => 'oeu', 'Oeu050849.2' => 'oeu', 'Oeu051063.2' => 'oeu', 'Oeu052368.1' => 'oeu', 'Oeu052370.1' => 'oeu', 'Os01g0210400' => 'osa', 'Os01g0304300' => 'osa', 'Os01g0749100' => 'osa', 'Os02g0745800' => 'osa', 'Os03g0769050' => 'osa', 'Os05g0531500' => 'osa', 'Os06g0724300' => 'osa', 'Os11g0198100' => 'osa', 'Peaxi162Scf00069g01425' => 'pax', 'Peaxi162Scf00280g00811' => 'pax', 'Peaxi162Scf00310g00615' => 'pax', 'Peaxi162Scf00362g00542' => 'pax', 'Peaxi162Scf00461g00310' => 'pax', 'Peaxi162Scf00530g00118' => 'pax', 'Peaxi162Scf00541g00057' => 'pax', 'Peaxi162Scf00661g00017' => 'pax', 'Peaxi162Scf00926g00027' => 'pax', 'Peaxi162Scf01064g00263' => 'pax', 'Peaxi162Scf01211g00135' => 'pax', 'PGR004G2336' => 'pgr', 'PGR042G0327' => 'pgr', 'PGR042G1957' => 'pgr', 'PGR042G2003' => 'pgr', 'PGR042G3929' => 'pgr', 'PGR083G1137' => 'pgr', 'PGR083G1364' => 'pgr', 'PGSC0003DMG400003381' => 'stu', 'PGSC0003DMG400003417' => 'stu', 'PGSC0003DMG400008981' => 'stu', 'PGSC0003DMG400012417' => 'stu', 'PGSC0003DMG400012823' => 'stu', 'PGSC0003DMG400016885' => 'stu', 'PGSC0003DMG400022812' => 'stu', 'PGSC0003DMG400029726' => 'stu', 'PGSC0003DMG401009243' => 'stu', 'PGSC0003DMG401031505' => 'stu', 'PGSC0003DMG402031505' => 'stu', 'Phvul.001G017600' => 'pvu', 'Phvul.002G193500' => 'pvu', 'Phvul.002G228900' => 'pvu', 'Phvul.002G236800' => 'pvu', 'Phvul.003G049500' => 'pvu', 'Phvul.005G072000' => 'pvu', 'Phvul.006G164800' => 'pvu', 'Phvul.006G185100' => 'pvu', 'Phvul.007G090000' => 'pvu', 'Potri.001G399800' => 'ptr', 'Potri.002G149900' => 'ptr', 'Potri.004G044100' => 'ptr', 'Potri.004G177600' => 'ptr', 'Potri.009G138000' => 'ptr', 'Potri.010G094000' => 'ptr', 'Potri.011G053000' => 'ptr', 'Potri.011G119300' => 'ptr', 'Potri.013G113700' => 'ptr', 'Potri.018G107800' => 'ptr', 'Potri.019G084100' => 'ptr', 'Pp3c14_23720' => 'ppa', 'Pp3c16_6340' => 'ppa', 'Pp3c23_13420' => 'ppa', 'Pp3c24_2740' => 'ppa', 'Pp3c25_860' => 'ppa', 'Pp3c8_21750' => 'ppa', 'Prupe.1G273000' => 'ppe', 'Prupe.1G273700' => 'ppe', 'Prupe.1G274100' => 'ppe', 'Prupe.2G023300' => 'ppe', 'Prupe.4G048000' => 'ppe', 'Prupe.4G080400' => 'ppe', 'Prupe.4G181200' => 'ppe', 'Prupe.8G056900' => 'ppe', 'Prupe.8G168700' => 'ppe', 'Psat1g189080' => 'psa', 'Psat1g204760' => 'psa', 'Psat4g175560' => 'psa', 'Psat4g177720' => 'psa', 'Psat5g244240' => 'psa', 'Psat6g010720' => 'psa', 'Psat6g187200' => 'psa', 'Psat7g072040' => 'psa', 'PSO017G3501' => 'pso', 'PSO063G2148' => 'pso', 'PSO063G5608' => 'pso', 'PSO210G6392' => 'pso', 'PSO541G2319' => 'pso', 'PSO541G2836' => 'pso', 'PSO541G4012' => 'pso', 'PSO541G6253' => 'pso', 'PSO675G0580' => 'pso', 'PSO675G0856' => 'pso', 'PSO675G5635' => 'pso', 'PSO675G9157' => 'pso', 'PSO832G1660' => 'pso', 'PSO832G1969' => 'pso', 'QL02p007186' => 'qlo', 'QL02p033904' => 'qlo', 'QL03p064391' => 'qlo', 'QL05p040593' => 'qlo', 'QL05p058242' => 'qlo', 'QL08p021825' => 'qlo', 'QL11p004981' => 'qlo', 'RcHm_v2.0_Chr1g0318301' => 'rch', 'RcHm_v2.0_Chr4g0418501' => 'rch', 'RcHm_v2.0_Chr4g0439971' => 'rch', 'RcHm_v2.0_Chr5g0008541' => 'rch', 'RcHm_v2.0_Chr5g0014101' => 'rch', 'RcHm_v2.0_Chr5g0014131' => 'rch', 'RcHm_v2.0_Chr5g0033621' => 'rch', 'RcHm_v2.0_Chr6g0272041' => 'rch', 'RcHm_v2.0_Chr6g0278831' => 'rch', 'Rhsim02G0130400' => 'rsi', 'Rhsim02G0171100' => 'rsi', 'Rhsim05G0053000' => 'rsi', 'Rhsim05G0053100' => 'rsi', 'Rhsim06G0096500' => 'rsi', 'Rhsim06G0096600' => 'rsi', 'Rhsim06G0199100' => 'rsi', 'Rhsim12G0062300' => 'rsi', 'Rhsim12G0062800' => 'rsi', 'Sabra02G0118600' => 'sbr', 'Sabra04G0027300' => 'sbr', 'Sabra04G0119500' => 'sbr', 'Sabra08G0112500' => 'sbr', 'Sabra11G0036800' => 'sbr', 'Sabra11G0103800' => 'sbr', 'Sabra13G0096300' => 'sbr', 'Sabra16G0262300' => 'sbr', 'Sabra18G0091700' => 'sbr', 'Sabra19G0095400' => 'sbr', 'SalBow6G3080' => 'sbo', 'SalBow7G1157' => 'sbo', 'SalBow7G2123' => 'sbo', 'SalBow7G2285' => 'sbo', 'SalBow7G3537' => 'sbo', 'SalBow8G2947' => 'sbo', 'SalBow8G4463' => 'sbo', 'SalBow8G5466' => 'sbo', 'Sc01g0001750' => 'sci', 'Sc02g0006640' => 'sci', 'Sc02g0006670' => 'sci', 'Sc04g0008220' => 'sci', 'Sc05g0006190' => 'sci', 'Sc08g0002760' => 'sci', 'Sc17g0006170' => 'sci', 'Sc22g0002050' => 'sci', 'Sc23g0001190' => 'sci', 'Sc24g0000980' => 'sci', 'Sed0006245' => 'sed', 'Sed0007543' => 'sed', 'Sed0009411' => 'sed', 'Sed0010765' => 'sed', 'Sed0012944' => 'sed', 'Sed0014682' => 'sed', 'Sed0016174' => 'sed', 'Sed0016796' => 'sed', 'Sed0020317' => 'sed', 'Sed0021467' => 'sed', 'SEGI_01316' => 'sgi', 'SEGI_03374' => 'sgi', 'SEGI_16265' => 'sgi', 'SEGI_18569' => 'sgi', 'SEGI_20351' => 'sgi', 'SEGI_26395' => 'sgi', 'SEGI_29469' => 'sgi', 'SEGI_34771' => 'sgi', 'SEGI_36769' => 'sgi', 'SEGI_37139' => 'sgi', 'SGA_v2.0_scaffold100G29687' => 'sas', 'SGA_v2.0_scaffold118G32472' => 'sas', 'SGA_v2.0_scaffold14G07051' => 'sas', 'SGA_v2.0_scaffold183G39845' => 'sas', 'SGA_v2.0_scaffold1G00174' => 'sas', 'SGA_v2.0_scaffold22G09714' => 'sas', 'SGA_v2.0_scaffold333G48992' => 'sas', 'SGA_v2.0_scaffold46G17491' => 'sas', 'SGA_v2.0_scaffold49G18294' => 'sas', 'SGA_v2.0_scaffold63G21658' => 'sas', 'SHI01741' => 'shi', 'SHI05771' => 'shi', 'SHI18077' => 'shi', 'SHI20525' => 'shi', 'SHI20527' => 'shi', 'SHI20528' => 'shi', 'SMO172G0185' => 'smo', 'SMO198G0020' => 'smo', 'SMO351G0006' => 'smo', 'SMO356G0118' => 'smo', 'SMO358G0296' => 'smo', 'SMO367G0079' => 'smo', 'SMO367G1277' => 'smo', 'Solyc01g014220.3' => 'sly', 'Solyc01g111770.2' => 'sly', 'Solyc02g078180.3' => 'sly', 'Solyc03g006430.3' => 'sly', 'Solyc03g006456.1' => 'sly', 'Solyc03g079860.2' => 'sly', 'Solyc04g079770.3' => 'sly', 'Solyc05g007430.4' => 'sly', 'Solyc07g063150.3' => 'sly', 'Solyc08g016620.3' => 'sly', 'Solyc09g057590.3' => 'sly', 'Solyc09g057600.1' => 'sly', 'Solyc10g009050.3' => 'sly', 'Solyc11g017420.2' => 'sly', 'Sopen01g053810' => 'spe', 'Sopen02g023040' => 'spe', 'Sopen03g002440' => 'spe', 'Sopen04g033350' => 'spe', 'Sopen05g003310' => 'spe', 'Sopen07g004050' => 'spe', 'Sopen07g031340' => 'spe', 'Sopen08g006990' => 'spe', 'Sopen10g004830' => 'spe', 'Sopen11g009370' => 'spe', 'Sp1g24450' => 'spa', 'Sp1g29670' => 'spa', 'Sp1g39600' => 'spa', 'Sp2g11080' => 'spa', 'Sp2g13970' => 'spa', 'Sp4g16130' => 'spa', 'Sp6g13080' => 'spa', 'Sp7g37270' => 'spa', 'TAR371G0065' => 'tar', 'TAR376G0340' => 'tar', 'TAR376G0435' => 'tar', 'TAR381G0002' => 'tar', 'TAR381G1236' => 'tar', 'TAR624G0055' => 'tar', 'TAR624G0324' => 'tar', 'TAR624G0696' => 'tar', 'TAR624G0906' => 'tar', 'TAR625G0107' => 'tar', 'TAR626G0015' => 'tar', 'TAR626G1356' => 'tar', 'TAR627G0888' => 'tar', 'TAR628G0399' => 'tar', 'TAR628G1327' => 'tar', 'TAR629G2831' => 'tar', 'TAR629G2874' => 'tar', 'TAR633G1432' => 'tar', 'TAR633G2771' => 'tar', 'THA.LOC104803394' => 'tha', 'THA.LOC104805153' => 'tha', 'THA.LOC104806784' => 'tha', 'THA.LOC104810473' => 'tha', 'THA.LOC104813100' => 'tha', 'THA.LOC104814215' => 'tha', 'THA.LOC104815554' => 'tha', 'THA.LOC104820544' => 'tha', 'THA.LOC104824754' => 'tha', 'THA.LOC104827717' => 'tha', 'Thecc.02G031400' => 'tca', 'Thecc.02G055900' => 'tca', 'Thecc.02G350800' => 'tca', 'Thecc.06G150900' => 'tca', 'Thecc.06G186600' => 'tca', 'Thecc.07G089600' => 'tca', 'Thecc.08G020400' => 'tca', 'Thecc.08G182100' => 'tca', 'Thhalv10000873m.g' => 'esa', 'Thhalv10004185m.g' => 'esa', 'Thhalv10006981m.g' => 'esa', 'Thhalv10007204m.g' => 'esa', 'Thhalv10011374m.g' => 'esa', 'Thhalv10013482m.g' => 'esa', 'Thhalv10017801m.g' => 'esa', 'Thhalv10024983m.g' => 'esa', 'TPR.G12072' => 'tpr', 'TPR.G15769' => 'tpr', 'TPR.G16504' => 'tpr', 'TPR.G16506' => 'tpr', 'TPR.G24345' => 'tpr', 'TPR.G26666' => 'tpr', 'TPR.G27320' => 'tpr', 'TPR.G31819' => 'tpr', 'TPR.G38879' => 'tpr', 'TPR.G39015' => 'tpr', 'TPR.G8819' => 'tpr', 'TWI09G0924' => 'twi', 'TWI12G0811' => 'twi', 'TWI12G1294' => 'twi', 'TWI31G0150' => 'twi', 'TWI36G1262' => 'twi', 'TWI38G1287' => 'twi', 'TWI38G1633' => 'twi', 'TWI38G1982' => 'twi', 'TWI39G0116' => 'twi', 'TWI60G1011' => 'twi', 'TWI63G0171' => 'twi', 'TWI73G0839' => 'twi', 'TWI79G1511' => 'twi', 'unitig_0.g915' => 'ugi', 'unitig_0.g916' => 'ugi', 'unitig_21.g20219' => 'ugi', 'unitig_21.g20416' => 'ugi', 'unitig_578.g16132' => 'ugi', 'unitig_578.g16718' => 'ugi', 'unitig_62.g23481' => 'ugi', 'unitig_744.g24535' => 'ugi', 'unitig_749.g13525' => 'ugi', 'vmacro01248' => 'vma', 'vmacro02290' => 'vma', 'vmacro10946' => 'vma', 'vmacro11865' => 'vma', 'vmacro12493' => 'vma', 'vmacro17322' => 'vma', 'vmacro21599' => 'vma', 'vmacro23041' => 'vma', 'VMungo0251G0004' => 'vmu', 'VMungo0251G2639' => 'vmu', 'VMungo0251G2967' => 'vmu', 'VMungo0540G0864' => 'vmu', 'VMungo0540G1569' => 'vmu', 'VMungo0647G0317' => 'vmu', 'VMungo0720G1373' => 'vmu', 'VMungo0720G1508' => 'vmu', 'VMungo1080G0485' => 'vmu', 'VMungo1215G3177' => 'vmu', 'Zm00001eb112600' => 'zma', 'Zm00001eb120220' => 'zma', 'Zm00001eb153240' => 'zma', 'Zm00001eb168880' => 'zma', 'Zm00001eb213920' => 'zma', 'Zm00001eb228280' => 'zma', 'Zm00001eb254580' => 'zma', 'Zm00001eb272180' => 'zma', 'Zm00001eb293190' => 'zma', 'Zm00001eb322930' => 'zma', 'Zm00001eb353360' => 'zma', 'Zm00001eb353390' => 'zma', 'Zm00001eb353430' => 'zma', 'Zm00001eb353440' => 'zma', 'Zm00001eb353780' => 'zma' ) $gf_id = 'HOM05D000499' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000499' ) $data_identifier = 'HOM05D000499' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 29, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 12, 'amhyb' => (int) 8, 'aly' => (int) 12, 'aox' => (int) 9, 'arhy' => (int) 26, 'ath' => (int) 8, 'atr' => (int) 7, 'acertr' => (int) 10, 'cqu' => (int) 15, 'bca' => (int) 29, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 11, 'cansat' => (int) 8, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 9, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 8, 'cpa' => (int) 10, 'csa' => (int) 7, 'camsi' => (int) 20, 'dca' => (int) 8, 'din' => (int) 12, 'dzi' => (int) 14, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 6, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 38, 'gra' => (int) 16, 'vvi' => (int) 8, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 5, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 11, 'lja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 11, 'mpo' => (int) 3, 'mbi' => (int) 14, 'mdo' => (int) 14, 'mtr' => (int) 8, 'cme' => (int) 9, 'egut' => (int) 9, 'ama' => (int) 11, 'nta' => (int) 17, 'nnu' => (int) 11, 'oeu' => (int) 18, 'osa' => (int) 8, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 6, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 9, 'rsi' => (int) 9, 'sbr' => (int) 10, 'sbo' => (int) 8, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 10, 'sas' => (int) 10, 'shi' => (int) 6, 'smo' => (int) 7, 'sly' => (int) 14, 'spe' => (int) 10, 'spa' => (int) 8, 'tar' => (int) 19, 'tha' => (int) 10, 'tca' => (int) 8, 'esa' => (int) 8, 'tpr' => (int) 11, 'twi' => (int) 13, 'ugi' => (int) 9, 'vma' => (int) 8, 'vmu' => (int) 10, 'zma' => (int) 15 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb353780' $species_info = array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ) $local_species = 'ppa' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000499', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1066', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p29780' => 'bna', 'A02p33180' => 'bna', 'A03p16470' => 'bna', 'A03p66010' => 'bna', 'A04p25970' => 'bna', 'A06p01270' => 'bna', 'A06p46080' => 'bna', 'A07p11400' => 'bna', 'A08p01840' => 'bna', 'A08p08230' => 'bna', 'A08p25740' => 'bna', 'A09p32070' => 'bna', 'A09p37830' => 'bna', 'A09p42840' => 'bna', 'A09p42850' => 'bna', 'Aa31LG10G2060' => 'aar', 'Aa31LG2G7410' => 'aar', 'Aa31LG6G10200' => 'aar', 'Aa31LG6G16680' => 'aar', 'Aa31LG6G8470' => 'aar', 'Aa31LG9G12730' => 'aar', 'Aa31LG9G13680' => 'aar', 'Aa31LG9G14920' => 'aar', 'Aa31LG9G6650' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4977' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5467' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3254' => 'aag', 'Actinidia02578' => 'ach', 'Actinidia07693' => 'ach', 'Actinidia08413' => 'ach', 'Actinidia08414' => 'ach', 'Actinidia15289' => 'ach', 'Actinidia19871' => 'ach', 'Actinidia21475' => 'ach', 'Actinidia22576' => 'ach', 'Actinidia28327' => 'ach', 'Actinidia32491' => 'ach', 'Actinidia39463' => 'ach', 'Actinidia39571' => 'ach', 'Ah.01g013750' => 'amhyb', 'Ah.01g023210' => 'amhyb', 'Ah.04g164850' => 'amhyb', 'Ah.05g178060' => 'amhyb', 'Ah.07g204270' => 'amhyb', 'Ah.07g208480' => 'amhyb', 'Ah.09g237410' => 'amhyb', 'Ah.14g089460' => 'amhyb', 'AL1G41790' => 'aly', 'AL1G49050' => 'aly', 'AL1G53810' => 'aly', 'AL1G61400' => 'aly', 'AL4G18580' => 'aly', 'AL5G12510' => 'aly', 'AL5G12540' => 'aly', 'AL6G43230' => 'aly', 'AL7G10370' => 'aly', 'AL7G19250' => 'aly', 'AL8G12240' => 'aly', 'AL8G18540' => 'aly', 'Aqoxy1G02409' => 'aox', 'Aqoxy2G03993' => 'aox', 'Aqoxy3G03357' => 'aox', 'Aqoxy4G00785' => 'aox', 'Aqoxy5G02598' => 'aox', 'Aqoxy6G00132' => 'aox', 'Aqoxy7G01776' => 'aox', 'Aqoxy7G02316' => 'aox', 'Aqoxy7G03973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.12AFKW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B8730' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27IQR1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3F75VG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3RE0GA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41TCQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.527VTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FIR39' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5W8UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DA38EV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ63HS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H1I32C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HC27T5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4M8AP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7N3CZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9UVDZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LS1NQA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT1D4B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SKC4TM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCFV76' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF9Q1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQWD9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1ZM88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WE07RT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YCK7VH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJE6Q6' => 'arhy', 'AT1G28240' => 'ath', 'AT1G34550' => 'ath', 'AT1G53040' => 'ath', 'AT2G02910' => 'ath', 'AT4G09630' => 'ath', 'AT4G38500' => 'ath', 'AT5G42660' => 'ath', 'AT5G46220' => 'ath', 'ATR0152G026' => 'atr', 'ATR0564G343' => 'atr', 'ATR0706G151' => 'atr', 'ATR0733G207' => 'atr', 'ATR0751G234' => 'atr', 'ATR0807G048' => 'atr', 'ATR1091G084' => 'atr', 'Atru.chr10.1229' => 'acertr', 'Atru.chr10.1230' => 'acertr', 'Atru.chr10.1874' => 'acertr', 'Atru.chr11.1808' => 'acertr', 'Atru.chr13.1795' => 'acertr', 'Atru.chr13.570' => 'acertr', 'Atru.chr2.2608' => 'acertr', 'Atru.chr2.2609' => 'acertr', 'Atru.chr5.3428' => 'acertr', 'Atru.chr8.1171' => 'acertr', 'AUR62004651' => 'cqu', 'AUR62008675' => 'cqu', 'AUR62010014' => 'cqu', 'AUR62013004' => 'cqu', 'AUR62014825' => 'cqu', 'AUR62015015' => 'cqu', 'AUR62015151' => 'cqu', 'AUR62017020' => 'cqu', 'AUR62019422' => 'cqu', 'AUR62023570' => 'cqu', 'AUR62025571' => 'cqu', 'AUR62029098' => 'cqu', 'AUR62033863' => 'cqu', 'AUR62034296' => 'cqu', 'AUR62040075' => 'cqu', 'BcaB02g07334' => 'bca', 'BcaB02g10575' => 'bca', 'BcaB03g12119' => 'bca', 'BcaB03g12120' => 'bca', 'BcaB03g13945' => 'bca', 'BcaB04g17123' => 'bca', 'BcaB04g17867' => 'bca', 'BcaB04g19839' => 'bca', 'BcaB07g30317' => 'bca', 'BcaB07g32432' => 'bca', 'BcaB07g33362' => 'bca', 'BcaB08g36611' => 'bca', 'BcaC01g00028' => 'bca', 'BcaC01g01356' => 'bca', 'BcaC01g02034' => 'bca', 'BcaC01g06051' => 'bca', 'BcaC03g16839' => 'bca', 'BcaC03g17176' => 'bca', 'BcaC05g26829' => 'bca', 'BcaC06g31490' => 'bca', 'BcaC06g35344' => 'bca', 'BcaC06g36570' => 'bca', 'BcaC07g37537' => 'bca', 'BcaC08g43491' => 'bca', 'BcaC08g43773' => 'bca', 'BcaNung00234' => 'bca', 'BcaNung01982' => 'bca', 'BcaNung03707' => 'bca', 'BcaNung06454' => 'bca', 'BolC2t10762H' => 'bol', 'BolC2t11191H' => 'bol', 'BolC3t14322H' => 'bol', 'BolC3t19747H' => 'bol', 'BolC3t21425H' => 'bol', 'BolC4t27800H' => 'bol', 'BolC5t31423H' => 'bol', 'BolC6t35951H' => 'bol', 'BolC6t36282H' => 'bol', 'BolC7t40678H' => 'bol', 'BolC7t40679H' => 'bol', 'BolC7t42222H' => 'bol', 'BolC7t43492H' => 'bol', 'BolC7t46785H' => 'bol', 'BolC8t47853H' => 'bol', 'BolC9t56805H' => 'bol', 'BraA02t08000Z' => 'bra', 'BraA02t08341Z' => 'bra', 'BraA03t10936Z' => 'bra', 'BraA03t15657Z' => 'bra', 'BraA04t18100Z' => 'bra', 'BraA05t20523Z' => 'bra', 'BraA06t23353Z' => 'bra', 'BraA06t27473Z' => 'bra', 'BraA06t27769Z' => 'bra', 'BraA07t28928Z' => 'bra', 'BraA08t32236Z' => 'bra', 'BraA08t32841Z' => 'bra', 'BraA08t34524Z' => 'bra', 'BraA09t38742Z' => 'bra', 'BraA09t39295Z' => 'bra', 'C02p47180' => 'bna', 'C02p50990' => 'bna', 'C03p19360' => 'bna', 'C03p74950' => 'bna', 'C03p91000' => 'bna', 'C04p63260' => 'bna', 'C05p27050' => 'bna', 'C06p08750' => 'bna', 'C06p11490' => 'bna', 'C07p02820' => 'bna', 'C07p17180' => 'bna', 'C07p29440' => 'bna', 'C07p63730' => 'bna', 'C09p39260' => 'bna', 'CAN.G1164.34' => 'can', 'CAN.G1164.39' => 'can', 'CAN.G1530.3' => 'can', 'CAN.G162.61' => 'can', 'CAN.G176.6' => 'can', 'CAN.G289.49' => 'can', 'CAN.G370.21' => 'can', 'CAN.G370.22' => 'can', 'CAN.G371.117' => 'can', 'CAN.G58.37' => 'can', 'CAN.G588.98' => 'can', 'CANSAT21G2266' => 'cansat', 'CANSAT25G2799' => 'cansat', 'CANSAT35G0862' => 'cansat', 'CANSAT35G1704' => 'cansat', 'CANSAT35G1760' => 'cansat', 'CANSAT56G3971' => 'cansat', 'CANSAT56G4116' => 'cansat', 'CANSAT80G1259' => 'cansat', 'CARHR027730' => 'chi', 'CARHR033880' => 'chi', 'CARHR043270' => 'chi', 'CARHR145330' => 'chi', 'CARHR145340' => 'chi', 'CARHR175570' => 'chi', 'CARHR181570' => 'chi', 'CARHR258470' => 'chi', 'CARHR260490' => 'chi', 'CARHR294220' => 'chi', 'Carub.0001s2668' => 'cru', 'Carub.0001s3257' => 'cru', 'Carub.0001s4220' => 'cru', 'Carub.0005s0179' => 'cru', 'Carub.0006s2807' => 'cru', 'Carub.0007s0039' => 'cru', 'Carub.0008s0169' => 'cru', 'Carub.0008s0636' => 'cru', 'Ca_00338_v3' => 'car', 'Ca_00542_v3' => 'car', 'Ca_01844_v3' => 'car', 'Ca_10611_v3' => 'car', 'Ca_13326_v3' => 'car', 'Ca_17944_v3' => 'car', 'Ca_18546_v3' => 'car', 'Ca_24219_v3' => 'car', 'Ca_29972_v3' => 'car', 'CBR_g3681' => 'cbr', 'CBR_g40021' => 'cbr', 'Cc01_g08140' => 'ccan', 'Cc02_g13410' => 'ccan', 'Cc02_g37480' => 'ccan', 'Cc05_g12030' => 'ccan', 'Cc09_g03370' => 'ccan', 'Cc09_g10300' => 'ccan', 'Cc10_g03530' => 'ccan', 'Cc10_g11380' => 'ccan', 'CDE01G0176' => 'cde', 'CDE02G0675' => 'cde', 'CDE02G0942' => 'cde', 'CDE02G1153' => 'cde', 'CDE02G4177' => 'cde', 'CDE04G2117' => 'cde', 'CDE04G2736' => 'cde', 'CDE08G1161' => 'cde', 'CDE09G1238' => 'cde', 'Cfa000467' => 'cfa', 'Cfa000947' => 'cfa', 'Cfa004969' => 'cfa', 'Cfa005284' => 'cfa', 'Cfa008993' => 'cfa', 'Cfa018187' => 'cfa', 'Cfa018454' => 'cfa', 'Cfa020585' => 'cfa', 'Ciclev10000424m.g' => 'ccl', 'Ciclev10003605m.g' => 'ccl', 'Ciclev10007828m.g' => 'ccl', 'Ciclev10014620m.g' => 'ccl', 'Ciclev10015169m.g' => 'ccl', 'Ciclev10018291m.g' => 'ccl', 'Ciclev10028256m.g' => 'ccl', 'Ciclev10033822m.g' => 'ccl', 'CiPaw.05G060300' => 'cil', 'CiPaw.05G085000' => 'cil', 'CiPaw.06G083700' => 'cil', 'CiPaw.06G120300' => 'cil', 'CiPaw.09G060500' => 'cil', 'CiPaw.09G123800' => 'cil', 'CiPaw.11G169700' => 'cil', 'CiPaw.12G118300' => 'cil', 'CiPaw.15G071000' => 'cil', 'CiPaw.15G081900' => 'cil', 'ClCG01G024610' => 'cla', 'ClCG03G006070' => 'cla', 'ClCG05G019250' => 'cla', 'ClCG09G009500' => 'cla', 'ClCG11G008200' => 'cla', 'ClCG11G018080' => 'cla', 'COL.COLO4_17373' => 'col', 'COL.COLO4_22994' => 'col', 'COL.COLO4_26389' => 'col', 'COL.COLO4_27170' => 'col', 'COL.COLO4_31074' => 'col', 'COL.COLO4_31465' => 'col', 'COL.COLO4_36438' => 'col', 'COL.COLO4_36439' => 'col', 'Cpa.g.c38781' => 'cpa', 'Cpa.g.sc128.12' => 'cpa', 'Cpa.g.sc166.7' => 'cpa', 'Cpa.g.sc166.8' => 'cpa', 'Cpa.g.sc20.111' => 'cpa', 'Cpa.g.sc27.31' => 'cpa', 'Cpa.g.sc64.36' => 'cpa', 'Cpa.g.sc64.37' => 'cpa', 'Cpa.g.sc66.49' => 'cpa', 'Cpa.g.sc80.64' => 'cpa', 'CsaV3_1G012320' => 'csa', 'CsaV3_2G008480' => 'csa', 'CsaV3_2G033450' => 'csa', 'CsaV3_3G044830' => 'csa', 'CsaV3_4G033710' => 'csa', 'CsaV3_6G051730' => 'csa', 'CsaV3_7G025350' => 'csa', 'CSS0001067' => 'camsi', 'CSS0005996' => 'camsi', 'CSS0006590' => 'camsi', 'CSS0009673' => 'camsi', 'CSS0010201' => 'camsi', 'CSS0010549' => 'camsi', 'CSS0011364' => 'camsi', 'CSS0014473' => 'camsi', 'CSS0014961' => 'camsi', 'CSS0020191' => 'camsi', 'CSS0021165' => 'camsi', 'CSS0022306' => 'camsi', 'CSS0030591' => 'camsi', 'CSS0030696' => 'camsi', 'CSS0032653' => 'camsi', 'CSS0037487' => 'camsi', 'CSS0041102' => 'camsi', 'CSS0041261' => 'camsi', 'CSS0046246' => 'camsi', 'CSS0049256' => 'camsi', 'DCAR_004075' => 'dca', 'DCAR_011538' => 'dca', 'DCAR_019553' => 'dca', 'DCAR_020952' => 'dca', 'DCAR_021739' => 'dca', 'DCAR_027407' => 'dca', 'DCAR_027913' => 'dca', 'DCAR_028066' => 'dca', 'Dinv05899' => 'din', 'Dinv07563' => 'din', 'Dinv08010' => 'din', 'Dinv14125' => 'din', 'Dinv20172' => 'din', 'Dinv30743' => 'din', 'Dinv31229' => 'din', 'Dinv34162' => 'din', 'Dinv36028' => 'din', 'Dinv39368' => 'din', 'Dinv40565' => 'din', 'Dinv41706' => 'din', 'Duzib052G0089' => 'dzi', 'Duzib116G0641' => 'dzi', 'Duzib132G0069' => 'dzi', 'Duzib132G1219' => 'dzi', 'Duzib147G0278' => 'dzi', 'Duzib160G0480' => 'dzi', 'Duzib170G0661' => 'dzi', 'Duzib177G0591' => 'dzi', 'Duzib187G1353' => 'dzi', 'Duzib192G0858' => 'dzi', 'Duzib192G0883' => 'dzi', 'Duzib213G0506' => 'dzi', 'Duzib235G0289' => 'dzi', 'Duzib251G0422' => 'dzi', 'ECA232G3898' => 'eca', 'ECA233G5950' => 'eca', 'ECA234G1699' => 'eca', 'ECA234G2421' => 'eca', 'ECA236G0426' => 'eca', 'ECA236G4331' => 'eca', 'ECA248G2573' => 'eca', 'EL10Ac1g00077' => 'bvu', 'EL10Ac1g01746' => 'bvu', 'EL10Ac2g03464' => 'bvu', 'EL10Ac4g08176' => 'bvu', 'EL10Ac7g17521' => 'bvu', 'EL10Ac8g20386' => 'bvu', 'EL10Ac9g21343' => 'bvu', 'EL10Ac9g22688' => 'bvu', 'Eucgr.B03434' => 'egr', 'Eucgr.D00618' => 'egr', 'Eucgr.E02395' => 'egr', 'Eucgr.F01129' => 'egr', 'Eucgr.F02622' => 'egr', 'Eucgr.F04207' => 'egr', 'FAN01G0570' => 'fan', 'FAN03G3351' => 'fan', 'FAN06G3702' => 'fan', 'FAN07G2149' => 'fan', 'FAN10G3758' => 'fan', 'FAN11G1170' => 'fan', 'FAN11G2050' => 'fan', 'FAN11G2724' => 'fan', 'FAN12G1700' => 'fan', 'FAN12G2028' => 'fan', 'FAN15G1160' => 'fan', 'FAN15G3063' => 'fan', 'FAN16G2540' => 'fan', 'FAN16G3077' => 'fan', 'FAN16G3624' => 'fan', 'FAN17G0221' => 'fan', 'FAN20G2492' => 'fan', 'FAN20G2905' => 'fan', 'FAN21G0548' => 'fan', 'FAN21G1300' => 'fan', 'FAN22G0077' => 'fan', 'FAN22G1315' => 'fan', 'FAN24G1280' => 'fan', 'FAN24G1445' => 'fan', 'FAN24G3527' => 'fan', 'FAN25G0464' => 'fan', 'FAN25G2885' => 'fan', 'FAN25G3270' => 'fan', 'FAN27G1101' => 'fan', 'FAN27G2846' => 'fan', 'FAN27G3524' => 'fan', 'FvH4_2g11770' => 'fve', 'FvH4_2g15630' => 'fve', 'FvH4_3g05570' => 'fve', 'FvH4_3g09110' => 'fve', 'FvH4_3g19940' => 'fve', 'FvH4_4g04821' => 'fve', 'FvH4_4g31480' => 'fve', 'FvH4_7g01740' => 'fve', 'Glyma.05G130400' => 'gma', 'Glyma.05G156400' => 'gma', 'Glyma.07G197000' => 'gma', 'Glyma.08G085151' => 'gma', 'Glyma.08G114500' => 'gma', 'Glyma.08G300400' => 'gma', 'Glyma.10G215800' => 'gma', 'Glyma.12G224400' => 'gma', 'Glyma.13G179300' => 'gma', 'Glyma.13G218151' => 'gma', 'Glyma.13G238800' => 'gma', 'Glyma.13G276900' => 'gma', 'Glyma.14G078200' => 'gma', 'Glyma.15G074500' => 'gma', 'Glyma.15G094100' => 'gma', 'Glyma.17G247200' => 'gma', 'Glyma.18G120100' => 'gma', 'Glyma.20G176000' => 'gma', 'Gohir.A01G063600' => 'ghi', 'Gohir.A01G170301' => 'ghi', 'Gohir.A02G060500' => 'ghi', 'Gohir.A05G133850' => 'ghi', 'Gohir.A05G161400' => 'ghi', 'Gohir.A06G012900' => 'ghi', 'Gohir.A06G035901' => 'ghi', 'Gohir.A06G127100' => 'ghi', 'Gohir.A06G210500' => 'ghi', 'Gohir.A08G008650' => 'ghi', 'Gohir.A09G072700' => 'ghi', 'Gohir.A09G088301' => 'ghi', 'Gohir.A10G040600' => 'ghi', 'Gohir.A12G036300' => 'ghi', 'Gohir.A12G143350' => 'ghi', 'Gohir.A12G165500' => 'ghi', 'Gohir.A13G145700' => 'ghi', 'Gohir.D01G050000' => 'ghi', 'Gohir.D01G051366' => 'ghi', 'Gohir.D01G161350' => 'ghi', 'Gohir.D02G065900' => 'ghi', 'Gohir.D05G164200' => 'ghi', 'Gohir.D05G355500' => 'ghi', 'Gohir.D06G010400' => 'ghi', 'Gohir.D06G111250' => 'ghi', 'Gohir.D06G132000' => 'ghi', 'Gohir.D06G210500' => 'ghi', 'Gohir.D07G165675' => 'ghi', 'Gohir.D08G062240' => 'ghi', 'Gohir.D08G086101' => 'ghi', 'Gohir.D08G138060' => 'ghi', 'Gohir.D09G072300' => 'ghi', 'Gohir.D10G041400' => 'ghi', 'Gohir.D11G191020' => 'ghi', 'Gohir.D11G212066' => 'ghi', 'Gohir.D12G036300' => 'ghi', 'Gohir.D12G168600' => 'ghi', 'Gohir.D13G150600' => 'ghi', 'Gorai.001G057300' => 'gra', 'Gorai.002G069900' => 'gra', 'Gorai.002G200000' => 'gra', 'Gorai.003G067600' => 'gra', 'Gorai.005G074800' => 'gra', 'Gorai.006G087300' => 'gra', 'Gorai.008G037500' => 'gra', 'Gorai.008G181400' => 'gra', 'Gorai.009G169400' => 'gra', 'Gorai.009G387900' => 'gra', 'Gorai.010G013300' => 'gra', 'Gorai.010G153800' => 'gra', 'Gorai.010G255800' => 'gra', 'Gorai.011G043700' => 'gra', 'Gorai.011G198900' => 'gra', 'Gorai.013G168400' => 'gra', 'GSVIVG01005212001' => 'vvi', 'GSVIVG01006163001' => 'vvi', 'GSVIVG01009625001' => 'vvi', 'GSVIVG01014338001' => 'vvi', 'GSVIVG01020005001' => 'vvi', 'GSVIVG01021450001' => 'vvi', 'GSVIVG01023975001' => 'vvi', 'GSVIVG01034490001' => 'vvi', 'HanXRQChr04g0112071' => 'han', 'HanXRQChr05g0131151' => 'han', 'HanXRQChr09g0262371' => 'han', 'HanXRQChr09g0268401' => 'han', 'HanXRQChr10g0279241' => 'han', 'HanXRQChr10g0297961' => 'han', 'HanXRQChr11g0326231' => 'han', 'HanXRQChr11g0328471' => 'han', 'HanXRQChr16g0507941' => 'han', 'HanXRQChr17g0560211' => 'han', 'Haze_02108' => 'cav', 'Haze_02428' => 'cav', 'Haze_05593' => 'cav', 'Haze_06448' => 'cav', 'Haze_09427' => 'cav', 'Haze_12022' => 'cav', 'Haze_17612' => 'cav', 'Haze_17928' => 'cav', 'Hma1.2p1_0032F.1_g019250' => 'hma', 'Hma1.2p1_0163F.1_g072690' => 'hma', 'Hma1.2p1_0265F.1_g106710' => 'hma', 'Hma1.2p1_0286F.1_g113970' => 'hma', 'Hma1.2p1_0363F.1_g136640' => 'hma', 'Hma1.2p1_0584F.1_g183470' => 'hma', 'Hma1.2p1_0885F.1_g232570' => 'hma', 'HPP92_006022' => 'vpl', 'HPP92_007320' => 'vpl', 'HPP92_011521' => 'vpl', 'HPP92_019387' => 'vpl', 'HPP92_024038' => 'vpl', 'Hund05891' => 'sun', 'Hund06450' => 'sun', 'Hund12053' => 'sun', 'Hund16800' => 'sun', 'Hund21222' => 'sun', 'Hund22896' => 'sun', 'Hund23746' => 'sun', 'Hund27083' => 'sun', 'Lalb_Chr02g0141831' => 'lal', 'Lalb_Chr02g0141841' => 'lal', 'Lalb_Chr05g0220411' => 'lal', 'Lalb_Chr06g0162081' => 'lal', 'Lalb_Chr09g0327651' => 'lal', 'Lalb_Chr13g0295051' => 'lal', 'Lalb_Chr15g0086801' => 'lal', 'Lalb_Chr16g0383781' => 'lal', 'Lalb_Chr16g0383791' => 'lal', 'Lalb_Chr18g0055441' => 'lal', 'Lalb_Chr18g0059611' => 'lal', 'Lalb_Chr20g0109661' => 'lal', 'Lalb_Chr20g0109831' => 'lal', 'Lalb_Chr20g0121871' => 'lal', 'Lalb_Chr22g0355361' => 'lal', 'Lalb_Chr25g0286371' => 'lal', 'Lj1A1187G43' => 'lonja', 'Lj1A1205T50' => 'lonja', 'Lj1A800G33' => 'lonja', 'Lj1C1187T7' => 'lonja', 'Lj1C843T11' => 'lonja', 'Lj1g0010940' => 'lja', 'Lj2A288T69' => 'lonja', 'Lj3g0024276' => 'lja', 'Lj4A47T76' => 'lonja', 'Lj4g0005805' => 'lja', 'Lj4g0006097' => 'lja', 'Lj4g0008528' => 'lja', 'Lj4g0024907' => 'lja', 'Lj5g0012472' => 'lja', 'Lj5g0018648' => 'lja', 'Lj6C789G1' => 'lonja', 'Lj6g0004000' => 'lja', 'Lj7A292G67' => 'lonja', 'Lj7A292T64' => 'lonja', 'Lj9A400T58' => 'lonja', 'Lsat_1_v5_gn_1_126181' => 'lsa', 'Lsat_1_v5_gn_4_123041' => 'lsa', 'Lsat_1_v5_gn_4_133620' => 'lsa', 'Lsat_1_v5_gn_4_53221' => 'lsa', 'Lsat_1_v5_gn_4_71961' => 'lsa', 'Lsat_1_v5_gn_7_105241' => 'lsa', 'Lsat_1_v5_gn_7_21361' => 'lsa', 'Lsat_1_v5_gn_7_28860' => 'lsa', 'Lsat_1_v5_gn_7_31260' => 'lsa', 'Lsat_1_v5_gn_8_52801' => 'lsa', 'Manes.02G191400' => 'mes', 'Manes.03G110100' => 'mes', 'Manes.04G071100' => 'mes', 'Manes.05G100500' => 'mes', 'Manes.05G164700' => 'mes', 'Manes.15G087000' => 'mes', 'Manes.15G121500' => 'mes', 'Manes.16G028300' => 'mes', 'Manes.17G046100' => 'mes', 'Manes.17G069800' => 'mes', 'Manes.18G100500' => 'mes', 'Mapoly0002s0109' => 'mpo', 'Mapoly0024s0007' => 'mpo', 'Mapoly0089s0032' => 'mpo', 'MBI04_g42241_MAGBIO' => 'mbi', 'MBI05_g11988_MAGBIO' => 'mbi', 'MBI05_g35452_MAGBIO' => 'mbi', 'MBI07_g30179_MAGBIO' => 'mbi', 'MBI07_g35859_MAGBIO' => 'mbi', 'MBI07_g35860_MAGBIO' => 'mbi', 'MBI07_g37166_MAGBIO' => 'mbi', 'MBI08_g18172_MAGBIO' => 'mbi', 'MBI09_g08441_MAGBIO' => 'mbi', 'MBI13_g01676_MAGBIO' => 'mbi', 'MBI14_g42955_MAGBIO' => 'mbi', 'MBI16_g13161_MAGBIO' => 'mbi', 'MBI17_g27204_MAGBIO' => 'mbi', 'MBI19_g21595_MAGBIO' => 'mbi', 'MD00G1148400' => 'mdo', 'MD02G1301200' => 'mdo', 'MD03G1227800' => 'mdo', 'MD05G1041100' => 'mdo', 'MD05G1124800' => 'mdo', 'MD05G1284000' => 'mdo', 'MD05G1338800' => 'mdo', 'MD05G1338900' => 'mdo', 'MD07G1022800' => 'mdo', 'MD10G1047500' => 'mdo', 'MD10G1127500' => 'mdo', 'MD10G1262300' => 'mdo', 'MD10G1293800' => 'mdo', 'MD16G1074300' => 'mdo', 'Medtr1g021670' => 'mtr', 'Medtr1g096320' => 'mtr', 'Medtr2g013690' => 'mtr', 'Medtr2g019450' => 'mtr', 'Medtr2g085170' => 'mtr', 'Medtr4g088785' => 'mtr', 'Medtr8g055930' => 'mtr', 'Medtr8g085850' => 'mtr', 'MELO3C002605.2' => 'cme', 'MELO3C003891.2' => 'cme', 'MELO3C004012.2' => 'cme', 'MELO3C007134.2' => 'cme', 'MELO3C008118.2' => 'cme', 'MELO3C016700.2' => 'cme', 'MELO3C024127.2' => 'cme', 'MELO3C033361.2' => 'cme', 'MELO3C033362.2' => 'cme', 'Migut.C00430' => 'egut', 'Migut.C01246' => 'egut', 'Migut.E00101' => 'egut', 'Migut.H01486' => 'egut', 'Migut.H01939' => 'egut', 'Migut.K00360' => 'egut', 'Migut.M00910' => 'egut', 'Migut.M01139' => 'egut', 'Migut.N02677' => 'egut', 'MSTRG.13252' => 'ama', 'MSTRG.14701' => 'ama', 'MSTRG.1521' => 'ama', 'MSTRG.15884' => 'ama', 'MSTRG.16242' => 'ama', 'MSTRG.22285' => 'ama', 'MSTRG.22444' => 'ama', 'MSTRG.2349' => 'ama', 'MSTRG.26308' => 'ama', 'MSTRG.28296' => 'ama', 'MSTRG.9895' => 'ama', 'Nitab4.5_0000110g0060' => 'nta', 'Nitab4.5_0000420g0130' => 'nta', 'Nitab4.5_0000422g0030' => 'nta', 'Nitab4.5_0000560g0180' => 'nta', 'Nitab4.5_0000703g0100' => 'nta', 'Nitab4.5_0000786g0200' => 'nta', 'Nitab4.5_0001336g0020' => 'nta', 'Nitab4.5_0001796g0030' => 'nta', 'Nitab4.5_0003348g0060' => 'nta', 'Nitab4.5_0003698g0040' => 'nta', 'Nitab4.5_0003942g0090' => 'nta', 'Nitab4.5_0004775g0070' => 'nta', 'Nitab4.5_0004864g0030' => 'nta', 'Nitab4.5_0005615g0020' => 'nta', 'Nitab4.5_0009288g0030' => 'nta', 'Nitab4.5_0009341g0010' => 'nta', 'Nitab4.5_0009535g0010' => 'nta', 'Nn1g03995' => 'nnu', 'Nn1g04100' => 'nnu', 'Nn1g06530' => 'nnu', 'Nn3g16404' => 'nnu', 'Nn3g17212' => 'nnu', 'Nn3g20776' => 'nnu', 'Nn3g21923' => 'nnu', 'Nn5g27737' => 'nnu', 'Nn5g29461' => 'nnu', 'Nn7g38355' => 'nnu', 'Nn8g39873' => 'nnu', 'Oeu000548.2' => 'oeu', 'Oeu004672.1' => 'oeu', 'Oeu015605.2' => 'oeu', 'Oeu016092.1' => 'oeu', 'Oeu017879.3' => 'oeu', 'Oeu024910.1' => 'oeu', 'Oeu028965.1' => 'oeu', 'Oeu031269.1' => 'oeu', 'Oeu031270.1' => 'oeu', 'Oeu032535.1' => 'oeu', 'Oeu034151.1' => 'oeu', 'Oeu034152.1' => 'oeu', 'Oeu034588.2' => 'oeu', 'Oeu050846.1' => 'oeu', 'Oeu050849.2' => 'oeu', 'Oeu051063.2' => 'oeu', 'Oeu052368.1' => 'oeu', 'Oeu052370.1' => 'oeu', 'Os01g0210400' => 'osa', 'Os01g0304300' => 'osa', 'Os01g0749100' => 'osa', 'Os02g0745800' => 'osa', 'Os03g0769050' => 'osa', 'Os05g0531500' => 'osa', 'Os06g0724300' => 'osa', 'Os11g0198100' => 'osa', 'Peaxi162Scf00069g01425' => 'pax', 'Peaxi162Scf00280g00811' => 'pax', 'Peaxi162Scf00310g00615' => 'pax', 'Peaxi162Scf00362g00542' => 'pax', 'Peaxi162Scf00461g00310' => 'pax', 'Peaxi162Scf00530g00118' => 'pax', 'Peaxi162Scf00541g00057' => 'pax', 'Peaxi162Scf00661g00017' => 'pax', 'Peaxi162Scf00926g00027' => 'pax', 'Peaxi162Scf01064g00263' => 'pax', 'Peaxi162Scf01211g00135' => 'pax', 'PGR004G2336' => 'pgr', 'PGR042G0327' => 'pgr', 'PGR042G1957' => 'pgr', 'PGR042G2003' => 'pgr', 'PGR042G3929' => 'pgr', 'PGR083G1137' => 'pgr', 'PGR083G1364' => 'pgr', 'PGSC0003DMG400003381' => 'stu', 'PGSC0003DMG400003417' => 'stu', 'PGSC0003DMG400008981' => 'stu', 'PGSC0003DMG400012417' => 'stu', 'PGSC0003DMG400012823' => 'stu', 'PGSC0003DMG400016885' => 'stu', 'PGSC0003DMG400022812' => 'stu', 'PGSC0003DMG400029726' => 'stu', 'PGSC0003DMG401009243' => 'stu', 'PGSC0003DMG401031505' => 'stu', 'PGSC0003DMG402031505' => 'stu', 'Phvul.001G017600' => 'pvu', 'Phvul.002G193500' => 'pvu', 'Phvul.002G228900' => 'pvu', 'Phvul.002G236800' => 'pvu', 'Phvul.003G049500' => 'pvu', 'Phvul.005G072000' => 'pvu', 'Phvul.006G164800' => 'pvu', 'Phvul.006G185100' => 'pvu', 'Phvul.007G090000' => 'pvu', 'Potri.001G399800' => 'ptr', 'Potri.002G149900' => 'ptr', 'Potri.004G044100' => 'ptr', 'Potri.004G177600' => 'ptr', 'Potri.009G138000' => 'ptr', 'Potri.010G094000' => 'ptr', 'Potri.011G053000' => 'ptr', 'Potri.011G119300' => 'ptr', 'Potri.013G113700' => 'ptr', 'Potri.018G107800' => 'ptr', 'Potri.019G084100' => 'ptr', 'Pp3c14_23720' => 'ppa', 'Pp3c16_6340' => 'ppa', 'Pp3c23_13420' => 'ppa', 'Pp3c24_2740' => 'ppa', 'Pp3c25_860' => 'ppa', 'Pp3c8_21750' => 'ppa', 'Prupe.1G273000' => 'ppe', 'Prupe.1G273700' => 'ppe', 'Prupe.1G274100' => 'ppe', 'Prupe.2G023300' => 'ppe', 'Prupe.4G048000' => 'ppe', 'Prupe.4G080400' => 'ppe', 'Prupe.4G181200' => 'ppe', 'Prupe.8G056900' => 'ppe', 'Prupe.8G168700' => 'ppe', 'Psat1g189080' => 'psa', 'Psat1g204760' => 'psa', 'Psat4g175560' => 'psa', 'Psat4g177720' => 'psa', 'Psat5g244240' => 'psa', 'Psat6g010720' => 'psa', 'Psat6g187200' => 'psa', 'Psat7g072040' => 'psa', 'PSO017G3501' => 'pso', 'PSO063G2148' => 'pso', 'PSO063G5608' => 'pso', 'PSO210G6392' => 'pso', 'PSO541G2319' => 'pso', 'PSO541G2836' => 'pso', 'PSO541G4012' => 'pso', 'PSO541G6253' => 'pso', 'PSO675G0580' => 'pso', 'PSO675G0856' => 'pso', 'PSO675G5635' => 'pso', 'PSO675G9157' => 'pso', 'PSO832G1660' => 'pso', 'PSO832G1969' => 'pso', 'QL02p007186' => 'qlo', 'QL02p033904' => 'qlo', 'QL03p064391' => 'qlo', 'QL05p040593' => 'qlo', 'QL05p058242' => 'qlo', 'QL08p021825' => 'qlo', 'QL11p004981' => 'qlo', 'RcHm_v2.0_Chr1g0318301' => 'rch', 'RcHm_v2.0_Chr4g0418501' => 'rch', 'RcHm_v2.0_Chr4g0439971' => 'rch', 'RcHm_v2.0_Chr5g0008541' => 'rch', 'RcHm_v2.0_Chr5g0014101' => 'rch', 'RcHm_v2.0_Chr5g0014131' => 'rch', 'RcHm_v2.0_Chr5g0033621' => 'rch', 'RcHm_v2.0_Chr6g0272041' => 'rch', 'RcHm_v2.0_Chr6g0278831' => 'rch', 'Rhsim02G0130400' => 'rsi', 'Rhsim02G0171100' => 'rsi', 'Rhsim05G0053000' => 'rsi', 'Rhsim05G0053100' => 'rsi', 'Rhsim06G0096500' => 'rsi', 'Rhsim06G0096600' => 'rsi', 'Rhsim06G0199100' => 'rsi', 'Rhsim12G0062300' => 'rsi', 'Rhsim12G0062800' => 'rsi', 'Sabra02G0118600' => 'sbr', 'Sabra04G0027300' => 'sbr', 'Sabra04G0119500' => 'sbr', 'Sabra08G0112500' => 'sbr', 'Sabra11G0036800' => 'sbr', 'Sabra11G0103800' => 'sbr', 'Sabra13G0096300' => 'sbr', 'Sabra16G0262300' => 'sbr', 'Sabra18G0091700' => 'sbr', 'Sabra19G0095400' => 'sbr', 'SalBow6G3080' => 'sbo', 'SalBow7G1157' => 'sbo', 'SalBow7G2123' => 'sbo', 'SalBow7G2285' => 'sbo', 'SalBow7G3537' => 'sbo', 'SalBow8G2947' => 'sbo', 'SalBow8G4463' => 'sbo', 'SalBow8G5466' => 'sbo', 'Sc01g0001750' => 'sci', 'Sc02g0006640' => 'sci', 'Sc02g0006670' => 'sci', 'Sc04g0008220' => 'sci', 'Sc05g0006190' => 'sci', 'Sc08g0002760' => 'sci', 'Sc17g0006170' => 'sci', 'Sc22g0002050' => 'sci', 'Sc23g0001190' => 'sci', 'Sc24g0000980' => 'sci', 'Sed0006245' => 'sed', 'Sed0007543' => 'sed', 'Sed0009411' => 'sed', 'Sed0010765' => 'sed', 'Sed0012944' => 'sed', 'Sed0014682' => 'sed', 'Sed0016174' => 'sed', 'Sed0016796' => 'sed', 'Sed0020317' => 'sed', 'Sed0021467' => 'sed', 'SEGI_01316' => 'sgi', 'SEGI_03374' => 'sgi', 'SEGI_16265' => 'sgi', 'SEGI_18569' => 'sgi', 'SEGI_20351' => 'sgi', 'SEGI_26395' => 'sgi', 'SEGI_29469' => 'sgi', 'SEGI_34771' => 'sgi', 'SEGI_36769' => 'sgi', 'SEGI_37139' => 'sgi', 'SGA_v2.0_scaffold100G29687' => 'sas', 'SGA_v2.0_scaffold118G32472' => 'sas', 'SGA_v2.0_scaffold14G07051' => 'sas', 'SGA_v2.0_scaffold183G39845' => 'sas', 'SGA_v2.0_scaffold1G00174' => 'sas', 'SGA_v2.0_scaffold22G09714' => 'sas', 'SGA_v2.0_scaffold333G48992' => 'sas', 'SGA_v2.0_scaffold46G17491' => 'sas', 'SGA_v2.0_scaffold49G18294' => 'sas', 'SGA_v2.0_scaffold63G21658' => 'sas', 'SHI01741' => 'shi', 'SHI05771' => 'shi', 'SHI18077' => 'shi', 'SHI20525' => 'shi', 'SHI20527' => 'shi', 'SHI20528' => 'shi', 'SMO172G0185' => 'smo', 'SMO198G0020' => 'smo', 'SMO351G0006' => 'smo', 'SMO356G0118' => 'smo', 'SMO358G0296' => 'smo', 'SMO367G0079' => 'smo', 'SMO367G1277' => 'smo', 'Solyc01g014220.3' => 'sly', 'Solyc01g111770.2' => 'sly', 'Solyc02g078180.3' => 'sly', 'Solyc03g006430.3' => 'sly', 'Solyc03g006456.1' => 'sly', 'Solyc03g079860.2' => 'sly', 'Solyc04g079770.3' => 'sly', 'Solyc05g007430.4' => 'sly', 'Solyc07g063150.3' => 'sly', 'Solyc08g016620.3' => 'sly', 'Solyc09g057590.3' => 'sly', 'Solyc09g057600.1' => 'sly', 'Solyc10g009050.3' => 'sly', 'Solyc11g017420.2' => 'sly', 'Sopen01g053810' => 'spe', 'Sopen02g023040' => 'spe', 'Sopen03g002440' => 'spe', 'Sopen04g033350' => 'spe', 'Sopen05g003310' => 'spe', 'Sopen07g004050' => 'spe', 'Sopen07g031340' => 'spe', 'Sopen08g006990' => 'spe', 'Sopen10g004830' => 'spe', 'Sopen11g009370' => 'spe', 'Sp1g24450' => 'spa', 'Sp1g29670' => 'spa', 'Sp1g39600' => 'spa', 'Sp2g11080' => 'spa', 'Sp2g13970' => 'spa', 'Sp4g16130' => 'spa', 'Sp6g13080' => 'spa', 'Sp7g37270' => 'spa', 'TAR371G0065' => 'tar', 'TAR376G0340' => 'tar', 'TAR376G0435' => 'tar', 'TAR381G0002' => 'tar', 'TAR381G1236' => 'tar', 'TAR624G0055' => 'tar', 'TAR624G0324' => 'tar', 'TAR624G0696' => 'tar', 'TAR624G0906' => 'tar', 'TAR625G0107' => 'tar', 'TAR626G0015' => 'tar', 'TAR626G1356' => 'tar', 'TAR627G0888' => 'tar', 'TAR628G0399' => 'tar', 'TAR628G1327' => 'tar', 'TAR629G2831' => 'tar', 'TAR629G2874' => 'tar', 'TAR633G1432' => 'tar', 'TAR633G2771' => 'tar', 'THA.LOC104803394' => 'tha', 'THA.LOC104805153' => 'tha', 'THA.LOC104806784' => 'tha', 'THA.LOC104810473' => 'tha', 'THA.LOC104813100' => 'tha', 'THA.LOC104814215' => 'tha', 'THA.LOC104815554' => 'tha', 'THA.LOC104820544' => 'tha', 'THA.LOC104824754' => 'tha', 'THA.LOC104827717' => 'tha', 'Thecc.02G031400' => 'tca', 'Thecc.02G055900' => 'tca', 'Thecc.02G350800' => 'tca', 'Thecc.06G150900' => 'tca', 'Thecc.06G186600' => 'tca', 'Thecc.07G089600' => 'tca', 'Thecc.08G020400' => 'tca', 'Thecc.08G182100' => 'tca', 'Thhalv10000873m.g' => 'esa', 'Thhalv10004185m.g' => 'esa', 'Thhalv10006981m.g' => 'esa', 'Thhalv10007204m.g' => 'esa', 'Thhalv10011374m.g' => 'esa', 'Thhalv10013482m.g' => 'esa', 'Thhalv10017801m.g' => 'esa', 'Thhalv10024983m.g' => 'esa', 'TPR.G12072' => 'tpr', 'TPR.G15769' => 'tpr', 'TPR.G16504' => 'tpr', 'TPR.G16506' => 'tpr', 'TPR.G24345' => 'tpr', 'TPR.G26666' => 'tpr', 'TPR.G27320' => 'tpr', 'TPR.G31819' => 'tpr', 'TPR.G38879' => 'tpr', 'TPR.G39015' => 'tpr', 'TPR.G8819' => 'tpr', 'TWI09G0924' => 'twi', 'TWI12G0811' => 'twi', 'TWI12G1294' => 'twi', 'TWI31G0150' => 'twi', 'TWI36G1262' => 'twi', 'TWI38G1287' => 'twi', 'TWI38G1633' => 'twi', 'TWI38G1982' => 'twi', 'TWI39G0116' => 'twi', 'TWI60G1011' => 'twi', 'TWI63G0171' => 'twi', 'TWI73G0839' => 'twi', 'TWI79G1511' => 'twi', 'unitig_0.g915' => 'ugi', 'unitig_0.g916' => 'ugi', 'unitig_21.g20219' => 'ugi', 'unitig_21.g20416' => 'ugi', 'unitig_578.g16132' => 'ugi', 'unitig_578.g16718' => 'ugi', 'unitig_62.g23481' => 'ugi', 'unitig_744.g24535' => 'ugi', 'unitig_749.g13525' => 'ugi', 'vmacro01248' => 'vma', 'vmacro02290' => 'vma', 'vmacro10946' => 'vma', 'vmacro11865' => 'vma', 'vmacro12493' => 'vma', 'vmacro17322' => 'vma', 'vmacro21599' => 'vma', 'vmacro23041' => 'vma', 'VMungo0251G0004' => 'vmu', 'VMungo0251G2639' => 'vmu', 'VMungo0251G2967' => 'vmu', 'VMungo0540G0864' => 'vmu', 'VMungo0540G1569' => 'vmu', 'VMungo0647G0317' => 'vmu', 'VMungo0720G1373' => 'vmu', 'VMungo0720G1508' => 'vmu', 'VMungo1080G0485' => 'vmu', 'VMungo1215G3177' => 'vmu', 'Zm00001eb112600' => 'zma', 'Zm00001eb120220' => 'zma', 'Zm00001eb153240' => 'zma', 'Zm00001eb168880' => 'zma', 'Zm00001eb213920' => 'zma', 'Zm00001eb228280' => 'zma', 'Zm00001eb254580' => 'zma', 'Zm00001eb272180' => 'zma', 'Zm00001eb293190' => 'zma', 'Zm00001eb322930' => 'zma', 'Zm00001eb353360' => 'zma', 'Zm00001eb353390' => 'zma', 'Zm00001eb353430' => 'zma', 'Zm00001eb353440' => 'zma', 'Zm00001eb353780' => 'zma' ), 'gf_id' => 'HOM05D000499', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000499' ), 'data_identifier' => 'HOM05D000499', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000499', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1066', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p29780' => 'bna', 'A02p33180' => 'bna', 'A03p16470' => 'bna', 'A03p66010' => 'bna', 'A04p25970' => 'bna', 'A06p01270' => 'bna', 'A06p46080' => 'bna', 'A07p11400' => 'bna', 'A08p01840' => 'bna', 'A08p08230' => 'bna', 'A08p25740' => 'bna', 'A09p32070' => 'bna', 'A09p37830' => 'bna', 'A09p42840' => 'bna', 'A09p42850' => 'bna', 'Aa31LG10G2060' => 'aar', 'Aa31LG2G7410' => 'aar', 'Aa31LG6G10200' => 'aar', 'Aa31LG6G16680' => 'aar', 'Aa31LG6G8470' => 'aar', 'Aa31LG9G12730' => 'aar', 'Aa31LG9G13680' => 'aar', 'Aa31LG9G14920' => 'aar', 'Aa31LG9G6650' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4977' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5467' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3254' => 'aag', 'Actinidia02578' => 'ach', 'Actinidia07693' => 'ach', 'Actinidia08413' => 'ach', 'Actinidia08414' => 'ach', 'Actinidia15289' => 'ach', 'Actinidia19871' => 'ach', 'Actinidia21475' => 'ach', 'Actinidia22576' => 'ach', 'Actinidia28327' => 'ach', 'Actinidia32491' => 'ach', 'Actinidia39463' => 'ach', 'Actinidia39571' => 'ach', 'Ah.01g013750' => 'amhyb', 'Ah.01g023210' => 'amhyb', 'Ah.04g164850' => 'amhyb', 'Ah.05g178060' => 'amhyb', 'Ah.07g204270' => 'amhyb', 'Ah.07g208480' => 'amhyb', 'Ah.09g237410' => 'amhyb', 'Ah.14g089460' => 'amhyb', 'AL1G41790' => 'aly', 'AL1G49050' => 'aly', 'AL1G53810' => 'aly', 'AL1G61400' => 'aly', 'AL4G18580' => 'aly', 'AL5G12510' => 'aly', 'AL5G12540' => 'aly', 'AL6G43230' => 'aly', 'AL7G10370' => 'aly', 'AL7G19250' => 'aly', 'AL8G12240' => 'aly', 'AL8G18540' => 'aly', 'Aqoxy1G02409' => 'aox', 'Aqoxy2G03993' => 'aox', 'Aqoxy3G03357' => 'aox', 'Aqoxy4G00785' => 'aox', 'Aqoxy5G02598' => 'aox', 'Aqoxy6G00132' => 'aox', 'Aqoxy7G01776' => 'aox', 'Aqoxy7G02316' => 'aox', 'Aqoxy7G03973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.12AFKW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B8730' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27IQR1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3F75VG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3RE0GA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41TCQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.527VTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FIR39' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5W8UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DA38EV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ63HS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H1I32C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HC27T5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4M8AP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7N3CZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9UVDZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LS1NQA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT1D4B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SKC4TM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCFV76' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF9Q1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQWD9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1ZM88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WE07RT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YCK7VH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJE6Q6' => 'arhy', 'AT1G28240' => 'ath', 'AT1G34550' => 'ath', 'AT1G53040' => 'ath', 'AT2G02910' => 'ath', 'AT4G09630' => 'ath', 'AT4G38500' => 'ath', 'AT5G42660' => 'ath', 'AT5G46220' => 'ath', 'ATR0152G026' => 'atr', 'ATR0564G343' => 'atr', 'ATR0706G151' => 'atr', 'ATR0733G207' => 'atr', 'ATR0751G234' => 'atr', 'ATR0807G048' => 'atr', 'ATR1091G084' => 'atr', 'Atru.chr10.1229' => 'acertr', 'Atru.chr10.1230' => 'acertr', 'Atru.chr10.1874' => 'acertr', 'Atru.chr11.1808' => 'acertr', 'Atru.chr13.1795' => 'acertr', 'Atru.chr13.570' => 'acertr', 'Atru.chr2.2608' => 'acertr', 'Atru.chr2.2609' => 'acertr', 'Atru.chr5.3428' => 'acertr', 'Atru.chr8.1171' => 'acertr', 'AUR62004651' => 'cqu', 'AUR62008675' => 'cqu', 'AUR62010014' => 'cqu', 'AUR62013004' => 'cqu', 'AUR62014825' => 'cqu', 'AUR62015015' => 'cqu', 'AUR62015151' => 'cqu', 'AUR62017020' => 'cqu', 'AUR62019422' => 'cqu', 'AUR62023570' => 'cqu', 'AUR62025571' => 'cqu', 'AUR62029098' => 'cqu', 'AUR62033863' => 'cqu', 'AUR62034296' => 'cqu', 'AUR62040075' => 'cqu', 'BcaB02g07334' => 'bca', 'BcaB02g10575' => 'bca', 'BcaB03g12119' => 'bca', 'BcaB03g12120' => 'bca', 'BcaB03g13945' => 'bca', 'BcaB04g17123' => 'bca', 'BcaB04g17867' => 'bca', 'BcaB04g19839' => 'bca', 'BcaB07g30317' => 'bca', 'BcaB07g32432' => 'bca', 'BcaB07g33362' => 'bca', 'BcaB08g36611' => 'bca', 'BcaC01g00028' => 'bca', 'BcaC01g01356' => 'bca', 'BcaC01g02034' => 'bca', 'BcaC01g06051' => 'bca', 'BcaC03g16839' => 'bca', 'BcaC03g17176' => 'bca', 'BcaC05g26829' => 'bca', 'BcaC06g31490' => 'bca', 'BcaC06g35344' => 'bca', 'BcaC06g36570' => 'bca', 'BcaC07g37537' => 'bca', 'BcaC08g43491' => 'bca', 'BcaC08g43773' => 'bca', 'BcaNung00234' => 'bca', 'BcaNung01982' => 'bca', 'BcaNung03707' => 'bca', 'BcaNung06454' => 'bca', 'BolC2t10762H' => 'bol', 'BolC2t11191H' => 'bol', 'BolC3t14322H' => 'bol', 'BolC3t19747H' => 'bol', 'BolC3t21425H' => 'bol', 'BolC4t27800H' => 'bol', 'BolC5t31423H' => 'bol', 'BolC6t35951H' => 'bol', 'BolC6t36282H' => 'bol', 'BolC7t40678H' => 'bol', 'BolC7t40679H' => 'bol', 'BolC7t42222H' => 'bol', 'BolC7t43492H' => 'bol', 'BolC7t46785H' => 'bol', 'BolC8t47853H' => 'bol', 'BolC9t56805H' => 'bol', 'BraA02t08000Z' => 'bra', 'BraA02t08341Z' => 'bra', 'BraA03t10936Z' => 'bra', 'BraA03t15657Z' => 'bra', 'BraA04t18100Z' => 'bra', 'BraA05t20523Z' => 'bra', 'BraA06t23353Z' => 'bra', 'BraA06t27473Z' => 'bra', 'BraA06t27769Z' => 'bra', 'BraA07t28928Z' => 'bra', 'BraA08t32236Z' => 'bra', 'BraA08t32841Z' => 'bra', 'BraA08t34524Z' => 'bra', 'BraA09t38742Z' => 'bra', 'BraA09t39295Z' => 'bra', 'C02p47180' => 'bna', 'C02p50990' => 'bna', 'C03p19360' => 'bna', 'C03p74950' => 'bna', 'C03p91000' => 'bna', 'C04p63260' => 'bna', 'C05p27050' => 'bna', 'C06p08750' => 'bna', 'C06p11490' => 'bna', 'C07p02820' => 'bna', 'C07p17180' => 'bna', 'C07p29440' => 'bna', 'C07p63730' => 'bna', 'C09p39260' => 'bna', 'CAN.G1164.34' => 'can', 'CAN.G1164.39' => 'can', 'CAN.G1530.3' => 'can', 'CAN.G162.61' => 'can', 'CAN.G176.6' => 'can', 'CAN.G289.49' => 'can', 'CAN.G370.21' => 'can', 'CAN.G370.22' => 'can', 'CAN.G371.117' => 'can', 'CAN.G58.37' => 'can', 'CAN.G588.98' => 'can', 'CANSAT21G2266' => 'cansat', 'CANSAT25G2799' => 'cansat', 'CANSAT35G0862' => 'cansat', 'CANSAT35G1704' => 'cansat', 'CANSAT35G1760' => 'cansat', 'CANSAT56G3971' => 'cansat', 'CANSAT56G4116' => 'cansat', 'CANSAT80G1259' => 'cansat', 'CARHR027730' => 'chi', 'CARHR033880' => 'chi', 'CARHR043270' => 'chi', 'CARHR145330' => 'chi', 'CARHR145340' => 'chi', 'CARHR175570' => 'chi', 'CARHR181570' => 'chi', 'CARHR258470' => 'chi', 'CARHR260490' => 'chi', 'CARHR294220' => 'chi', 'Carub.0001s2668' => 'cru', 'Carub.0001s3257' => 'cru', 'Carub.0001s4220' => 'cru', 'Carub.0005s0179' => 'cru', 'Carub.0006s2807' => 'cru', 'Carub.0007s0039' => 'cru', 'Carub.0008s0169' => 'cru', 'Carub.0008s0636' => 'cru', 'Ca_00338_v3' => 'car', 'Ca_00542_v3' => 'car', 'Ca_01844_v3' => 'car', 'Ca_10611_v3' => 'car', 'Ca_13326_v3' => 'car', 'Ca_17944_v3' => 'car', 'Ca_18546_v3' => 'car', 'Ca_24219_v3' => 'car', 'Ca_29972_v3' => 'car', 'CBR_g3681' => 'cbr', 'CBR_g40021' => 'cbr', 'Cc01_g08140' => 'ccan', 'Cc02_g13410' => 'ccan', 'Cc02_g37480' => 'ccan', 'Cc05_g12030' => 'ccan', 'Cc09_g03370' => 'ccan', 'Cc09_g10300' => 'ccan', 'Cc10_g03530' => 'ccan', 'Cc10_g11380' => 'ccan', 'CDE01G0176' => 'cde', 'CDE02G0675' => 'cde', 'CDE02G0942' => 'cde', 'CDE02G1153' => 'cde', 'CDE02G4177' => 'cde', 'CDE04G2117' => 'cde', 'CDE04G2736' => 'cde', 'CDE08G1161' => 'cde', 'CDE09G1238' => 'cde', 'Cfa000467' => 'cfa', 'Cfa000947' => 'cfa', 'Cfa004969' => 'cfa', 'Cfa005284' => 'cfa', 'Cfa008993' => 'cfa', 'Cfa018187' => 'cfa', 'Cfa018454' => 'cfa', 'Cfa020585' => 'cfa', 'Ciclev10000424m.g' => 'ccl', 'Ciclev10003605m.g' => 'ccl', 'Ciclev10007828m.g' => 'ccl', 'Ciclev10014620m.g' => 'ccl', 'Ciclev10015169m.g' => 'ccl', 'Ciclev10018291m.g' => 'ccl', 'Ciclev10028256m.g' => 'ccl', 'Ciclev10033822m.g' => 'ccl', 'CiPaw.05G060300' => 'cil', 'CiPaw.05G085000' => 'cil', 'CiPaw.06G083700' => 'cil', 'CiPaw.06G120300' => 'cil', 'CiPaw.09G060500' => 'cil', 'CiPaw.09G123800' => 'cil', 'CiPaw.11G169700' => 'cil', 'CiPaw.12G118300' => 'cil', 'CiPaw.15G071000' => 'cil', 'CiPaw.15G081900' => 'cil', 'ClCG01G024610' => 'cla', 'ClCG03G006070' => 'cla', 'ClCG05G019250' => 'cla', 'ClCG09G009500' => 'cla', 'ClCG11G008200' => 'cla', 'ClCG11G018080' => 'cla', 'COL.COLO4_17373' => 'col', 'COL.COLO4_22994' => 'col', 'COL.COLO4_26389' => 'col', 'COL.COLO4_27170' => 'col', 'COL.COLO4_31074' => 'col', 'COL.COLO4_31465' => 'col', 'COL.COLO4_36438' => 'col', 'COL.COLO4_36439' => 'col', 'Cpa.g.c38781' => 'cpa', 'Cpa.g.sc128.12' => 'cpa', 'Cpa.g.sc166.7' => 'cpa', 'Cpa.g.sc166.8' => 'cpa', 'Cpa.g.sc20.111' => 'cpa', 'Cpa.g.sc27.31' => 'cpa', 'Cpa.g.sc64.36' => 'cpa', 'Cpa.g.sc64.37' => 'cpa', 'Cpa.g.sc66.49' => 'cpa', 'Cpa.g.sc80.64' => 'cpa', 'CsaV3_1G012320' => 'csa', 'CsaV3_2G008480' => 'csa', 'CsaV3_2G033450' => 'csa', 'CsaV3_3G044830' => 'csa', 'CsaV3_4G033710' => 'csa', 'CsaV3_6G051730' => 'csa', 'CsaV3_7G025350' => 'csa', 'CSS0001067' => 'camsi', 'CSS0005996' => 'camsi', 'CSS0006590' => 'camsi', 'CSS0009673' => 'camsi', 'CSS0010201' => 'camsi', 'CSS0010549' => 'camsi', 'CSS0011364' => 'camsi', 'CSS0014473' => 'camsi', 'CSS0014961' => 'camsi', 'CSS0020191' => 'camsi', 'CSS0021165' => 'camsi', 'CSS0022306' => 'camsi', 'CSS0030591' => 'camsi', 'CSS0030696' => 'camsi', 'CSS0032653' => 'camsi', 'CSS0037487' => 'camsi', 'CSS0041102' => 'camsi', 'CSS0041261' => 'camsi', 'CSS0046246' => 'camsi', 'CSS0049256' => 'camsi', 'DCAR_004075' => 'dca', 'DCAR_011538' => 'dca', 'DCAR_019553' => 'dca', 'DCAR_020952' => 'dca', 'DCAR_021739' => 'dca', 'DCAR_027407' => 'dca', 'DCAR_027913' => 'dca', 'DCAR_028066' => 'dca', 'Dinv05899' => 'din', 'Dinv07563' => 'din', 'Dinv08010' => 'din', 'Dinv14125' => 'din', 'Dinv20172' => 'din', 'Dinv30743' => 'din', 'Dinv31229' => 'din', 'Dinv34162' => 'din', 'Dinv36028' => 'din', 'Dinv39368' => 'din', 'Dinv40565' => 'din', 'Dinv41706' => 'din', 'Duzib052G0089' => 'dzi', 'Duzib116G0641' => 'dzi', 'Duzib132G0069' => 'dzi', 'Duzib132G1219' => 'dzi', 'Duzib147G0278' => 'dzi', 'Duzib160G0480' => 'dzi', 'Duzib170G0661' => 'dzi', 'Duzib177G0591' => 'dzi', 'Duzib187G1353' => 'dzi', 'Duzib192G0858' => 'dzi', 'Duzib192G0883' => 'dzi', 'Duzib213G0506' => 'dzi', 'Duzib235G0289' => 'dzi', 'Duzib251G0422' => 'dzi', 'ECA232G3898' => 'eca', 'ECA233G5950' => 'eca', 'ECA234G1699' => 'eca', 'ECA234G2421' => 'eca', 'ECA236G0426' => 'eca', 'ECA236G4331' => 'eca', 'ECA248G2573' => 'eca', 'EL10Ac1g00077' => 'bvu', 'EL10Ac1g01746' => 'bvu', 'EL10Ac2g03464' => 'bvu', 'EL10Ac4g08176' => 'bvu', 'EL10Ac7g17521' => 'bvu', 'EL10Ac8g20386' => 'bvu', 'EL10Ac9g21343' => 'bvu', 'EL10Ac9g22688' => 'bvu', 'Eucgr.B03434' => 'egr', 'Eucgr.D00618' => 'egr', 'Eucgr.E02395' => 'egr', 'Eucgr.F01129' => 'egr', 'Eucgr.F02622' => 'egr', 'Eucgr.F04207' => 'egr', 'FAN01G0570' => 'fan', 'FAN03G3351' => 'fan', 'FAN06G3702' => 'fan', 'FAN07G2149' => 'fan', 'FAN10G3758' => 'fan', 'FAN11G1170' => 'fan', 'FAN11G2050' => 'fan', 'FAN11G2724' => 'fan', 'FAN12G1700' => 'fan', 'FAN12G2028' => 'fan', 'FAN15G1160' => 'fan', 'FAN15G3063' => 'fan', 'FAN16G2540' => 'fan', 'FAN16G3077' => 'fan', 'FAN16G3624' => 'fan', 'FAN17G0221' => 'fan', 'FAN20G2492' => 'fan', 'FAN20G2905' => 'fan', 'FAN21G0548' => 'fan', 'FAN21G1300' => 'fan', 'FAN22G0077' => 'fan', 'FAN22G1315' => 'fan', 'FAN24G1280' => 'fan', 'FAN24G1445' => 'fan', 'FAN24G3527' => 'fan', 'FAN25G0464' => 'fan', 'FAN25G2885' => 'fan', 'FAN25G3270' => 'fan', 'FAN27G1101' => 'fan', 'FAN27G2846' => 'fan', 'FAN27G3524' => 'fan', 'FvH4_2g11770' => 'fve', 'FvH4_2g15630' => 'fve', 'FvH4_3g05570' => 'fve', 'FvH4_3g09110' => 'fve', 'FvH4_3g19940' => 'fve', 'FvH4_4g04821' => 'fve', 'FvH4_4g31480' => 'fve', 'FvH4_7g01740' => 'fve', 'Glyma.05G130400' => 'gma', 'Glyma.05G156400' => 'gma', 'Glyma.07G197000' => 'gma', 'Glyma.08G085151' => 'gma', 'Glyma.08G114500' => 'gma', 'Glyma.08G300400' => 'gma', 'Glyma.10G215800' => 'gma', 'Glyma.12G224400' => 'gma', 'Glyma.13G179300' => 'gma', 'Glyma.13G218151' => 'gma', 'Glyma.13G238800' => 'gma', 'Glyma.13G276900' => 'gma', 'Glyma.14G078200' => 'gma', 'Glyma.15G074500' => 'gma', 'Glyma.15G094100' => 'gma', 'Glyma.17G247200' => 'gma', 'Glyma.18G120100' => 'gma', 'Glyma.20G176000' => 'gma', 'Gohir.A01G063600' => 'ghi', 'Gohir.A01G170301' => 'ghi', 'Gohir.A02G060500' => 'ghi', 'Gohir.A05G133850' => 'ghi', 'Gohir.A05G161400' => 'ghi', 'Gohir.A06G012900' => 'ghi', 'Gohir.A06G035901' => 'ghi', 'Gohir.A06G127100' => 'ghi', 'Gohir.A06G210500' => 'ghi', 'Gohir.A08G008650' => 'ghi', 'Gohir.A09G072700' => 'ghi', 'Gohir.A09G088301' => 'ghi', 'Gohir.A10G040600' => 'ghi', 'Gohir.A12G036300' => 'ghi', 'Gohir.A12G143350' => 'ghi', 'Gohir.A12G165500' => 'ghi', 'Gohir.A13G145700' => 'ghi', 'Gohir.D01G050000' => 'ghi', 'Gohir.D01G051366' => 'ghi', 'Gohir.D01G161350' => 'ghi', 'Gohir.D02G065900' => 'ghi', 'Gohir.D05G164200' => 'ghi', 'Gohir.D05G355500' => 'ghi', 'Gohir.D06G010400' => 'ghi', 'Gohir.D06G111250' => 'ghi', 'Gohir.D06G132000' => 'ghi', 'Gohir.D06G210500' => 'ghi', 'Gohir.D07G165675' => 'ghi', 'Gohir.D08G062240' => 'ghi', 'Gohir.D08G086101' => 'ghi', 'Gohir.D08G138060' => 'ghi', 'Gohir.D09G072300' => 'ghi', 'Gohir.D10G041400' => 'ghi', 'Gohir.D11G191020' => 'ghi', 'Gohir.D11G212066' => 'ghi', 'Gohir.D12G036300' => 'ghi', 'Gohir.D12G168600' => 'ghi', 'Gohir.D13G150600' => 'ghi', 'Gorai.001G057300' => 'gra', 'Gorai.002G069900' => 'gra', 'Gorai.002G200000' => 'gra', 'Gorai.003G067600' => 'gra', 'Gorai.005G074800' => 'gra', 'Gorai.006G087300' => 'gra', 'Gorai.008G037500' => 'gra', 'Gorai.008G181400' => 'gra', 'Gorai.009G169400' => 'gra', 'Gorai.009G387900' => 'gra', 'Gorai.010G013300' => 'gra', 'Gorai.010G153800' => 'gra', 'Gorai.010G255800' => 'gra', 'Gorai.011G043700' => 'gra', 'Gorai.011G198900' => 'gra', 'Gorai.013G168400' => 'gra', 'GSVIVG01005212001' => 'vvi', 'GSVIVG01006163001' => 'vvi', 'GSVIVG01009625001' => 'vvi', 'GSVIVG01014338001' => 'vvi', 'GSVIVG01020005001' => 'vvi', 'GSVIVG01021450001' => 'vvi', 'GSVIVG01023975001' => 'vvi', 'GSVIVG01034490001' => 'vvi', 'HanXRQChr04g0112071' => 'han', 'HanXRQChr05g0131151' => 'han', 'HanXRQChr09g0262371' => 'han', 'HanXRQChr09g0268401' => 'han', 'HanXRQChr10g0279241' => 'han', 'HanXRQChr10g0297961' => 'han', 'HanXRQChr11g0326231' => 'han', 'HanXRQChr11g0328471' => 'han', 'HanXRQChr16g0507941' => 'han', 'HanXRQChr17g0560211' => 'han', 'Haze_02108' => 'cav', 'Haze_02428' => 'cav', 'Haze_05593' => 'cav', 'Haze_06448' => 'cav', 'Haze_09427' => 'cav', 'Haze_12022' => 'cav', 'Haze_17612' => 'cav', 'Haze_17928' => 'cav', 'Hma1.2p1_0032F.1_g019250' => 'hma', 'Hma1.2p1_0163F.1_g072690' => 'hma', 'Hma1.2p1_0265F.1_g106710' => 'hma', 'Hma1.2p1_0286F.1_g113970' => 'hma', 'Hma1.2p1_0363F.1_g136640' => 'hma', 'Hma1.2p1_0584F.1_g183470' => 'hma', 'Hma1.2p1_0885F.1_g232570' => 'hma', 'HPP92_006022' => 'vpl', 'HPP92_007320' => 'vpl', 'HPP92_011521' => 'vpl', 'HPP92_019387' => 'vpl', 'HPP92_024038' => 'vpl', 'Hund05891' => 'sun', 'Hund06450' => 'sun', 'Hund12053' => 'sun', 'Hund16800' => 'sun', 'Hund21222' => 'sun', 'Hund22896' => 'sun', 'Hund23746' => 'sun', 'Hund27083' => 'sun', 'Lalb_Chr02g0141831' => 'lal', 'Lalb_Chr02g0141841' => 'lal', 'Lalb_Chr05g0220411' => 'lal', 'Lalb_Chr06g0162081' => 'lal', 'Lalb_Chr09g0327651' => 'lal', 'Lalb_Chr13g0295051' => 'lal', 'Lalb_Chr15g0086801' => 'lal', 'Lalb_Chr16g0383781' => 'lal', 'Lalb_Chr16g0383791' => 'lal', 'Lalb_Chr18g0055441' => 'lal', 'Lalb_Chr18g0059611' => 'lal', 'Lalb_Chr20g0109661' => 'lal', 'Lalb_Chr20g0109831' => 'lal', 'Lalb_Chr20g0121871' => 'lal', 'Lalb_Chr22g0355361' => 'lal', 'Lalb_Chr25g0286371' => 'lal', 'Lj1A1187G43' => 'lonja', 'Lj1A1205T50' => 'lonja', 'Lj1A800G33' => 'lonja', 'Lj1C1187T7' => 'lonja', 'Lj1C843T11' => 'lonja', 'Lj1g0010940' => 'lja', 'Lj2A288T69' => 'lonja', 'Lj3g0024276' => 'lja', 'Lj4A47T76' => 'lonja', 'Lj4g0005805' => 'lja', 'Lj4g0006097' => 'lja', 'Lj4g0008528' => 'lja', 'Lj4g0024907' => 'lja', 'Lj5g0012472' => 'lja', 'Lj5g0018648' => 'lja', 'Lj6C789G1' => 'lonja', 'Lj6g0004000' => 'lja', 'Lj7A292G67' => 'lonja', 'Lj7A292T64' => 'lonja', 'Lj9A400T58' => 'lonja', 'Lsat_1_v5_gn_1_126181' => 'lsa', 'Lsat_1_v5_gn_4_123041' => 'lsa', 'Lsat_1_v5_gn_4_133620' => 'lsa', 'Lsat_1_v5_gn_4_53221' => 'lsa', 'Lsat_1_v5_gn_4_71961' => 'lsa', 'Lsat_1_v5_gn_7_105241' => 'lsa', 'Lsat_1_v5_gn_7_21361' => 'lsa', 'Lsat_1_v5_gn_7_28860' => 'lsa', 'Lsat_1_v5_gn_7_31260' => 'lsa', 'Lsat_1_v5_gn_8_52801' => 'lsa', 'Manes.02G191400' => 'mes', 'Manes.03G110100' => 'mes', 'Manes.04G071100' => 'mes', 'Manes.05G100500' => 'mes', 'Manes.05G164700' => 'mes', 'Manes.15G087000' => 'mes', 'Manes.15G121500' => 'mes', 'Manes.16G028300' => 'mes', 'Manes.17G046100' => 'mes', 'Manes.17G069800' => 'mes', 'Manes.18G100500' => 'mes', 'Mapoly0002s0109' => 'mpo', 'Mapoly0024s0007' => 'mpo', 'Mapoly0089s0032' => 'mpo', 'MBI04_g42241_MAGBIO' => 'mbi', 'MBI05_g11988_MAGBIO' => 'mbi', 'MBI05_g35452_MAGBIO' => 'mbi', 'MBI07_g30179_MAGBIO' => 'mbi', 'MBI07_g35859_MAGBIO' => 'mbi', 'MBI07_g35860_MAGBIO' => 'mbi', 'MBI07_g37166_MAGBIO' => 'mbi', 'MBI08_g18172_MAGBIO' => 'mbi', 'MBI09_g08441_MAGBIO' => 'mbi', 'MBI13_g01676_MAGBIO' => 'mbi', 'MBI14_g42955_MAGBIO' => 'mbi', 'MBI16_g13161_MAGBIO' => 'mbi', 'MBI17_g27204_MAGBIO' => 'mbi', 'MBI19_g21595_MAGBIO' => 'mbi', 'MD00G1148400' => 'mdo', 'MD02G1301200' => 'mdo', 'MD03G1227800' => 'mdo', 'MD05G1041100' => 'mdo', 'MD05G1124800' => 'mdo', 'MD05G1284000' => 'mdo', 'MD05G1338800' => 'mdo', 'MD05G1338900' => 'mdo', 'MD07G1022800' => 'mdo', 'MD10G1047500' => 'mdo', 'MD10G1127500' => 'mdo', 'MD10G1262300' => 'mdo', 'MD10G1293800' => 'mdo', 'MD16G1074300' => 'mdo', 'Medtr1g021670' => 'mtr', 'Medtr1g096320' => 'mtr', 'Medtr2g013690' => 'mtr', 'Medtr2g019450' => 'mtr', 'Medtr2g085170' => 'mtr', 'Medtr4g088785' => 'mtr', 'Medtr8g055930' => 'mtr', 'Medtr8g085850' => 'mtr', 'MELO3C002605.2' => 'cme', 'MELO3C003891.2' => 'cme', 'MELO3C004012.2' => 'cme', 'MELO3C007134.2' => 'cme', 'MELO3C008118.2' => 'cme', 'MELO3C016700.2' => 'cme', 'MELO3C024127.2' => 'cme', 'MELO3C033361.2' => 'cme', 'MELO3C033362.2' => 'cme', 'Migut.C00430' => 'egut', 'Migut.C01246' => 'egut', 'Migut.E00101' => 'egut', 'Migut.H01486' => 'egut', 'Migut.H01939' => 'egut', 'Migut.K00360' => 'egut', 'Migut.M00910' => 'egut', 'Migut.M01139' => 'egut', 'Migut.N02677' => 'egut', 'MSTRG.13252' => 'ama', 'MSTRG.14701' => 'ama', 'MSTRG.1521' => 'ama', 'MSTRG.15884' => 'ama', 'MSTRG.16242' => 'ama', 'MSTRG.22285' => 'ama', 'MSTRG.22444' => 'ama', 'MSTRG.2349' => 'ama', 'MSTRG.26308' => 'ama', 'MSTRG.28296' => 'ama', 'MSTRG.9895' => 'ama', 'Nitab4.5_0000110g0060' => 'nta', 'Nitab4.5_0000420g0130' => 'nta', 'Nitab4.5_0000422g0030' => 'nta', 'Nitab4.5_0000560g0180' => 'nta', 'Nitab4.5_0000703g0100' => 'nta', 'Nitab4.5_0000786g0200' => 'nta', 'Nitab4.5_0001336g0020' => 'nta', 'Nitab4.5_0001796g0030' => 'nta', 'Nitab4.5_0003348g0060' => 'nta', 'Nitab4.5_0003698g0040' => 'nta', 'Nitab4.5_0003942g0090' => 'nta', 'Nitab4.5_0004775g0070' => 'nta', 'Nitab4.5_0004864g0030' => 'nta', 'Nitab4.5_0005615g0020' => 'nta', 'Nitab4.5_0009288g0030' => 'nta', 'Nitab4.5_0009341g0010' => 'nta', 'Nitab4.5_0009535g0010' => 'nta', 'Nn1g03995' => 'nnu', 'Nn1g04100' => 'nnu', 'Nn1g06530' => 'nnu', 'Nn3g16404' => 'nnu', 'Nn3g17212' => 'nnu', 'Nn3g20776' => 'nnu', 'Nn3g21923' => 'nnu', 'Nn5g27737' => 'nnu', 'Nn5g29461' => 'nnu', 'Nn7g38355' => 'nnu', 'Nn8g39873' => 'nnu', 'Oeu000548.2' => 'oeu', 'Oeu004672.1' => 'oeu', 'Oeu015605.2' => 'oeu', 'Oeu016092.1' => 'oeu', 'Oeu017879.3' => 'oeu', 'Oeu024910.1' => 'oeu', 'Oeu028965.1' => 'oeu', 'Oeu031269.1' => 'oeu', 'Oeu031270.1' => 'oeu', 'Oeu032535.1' => 'oeu', 'Oeu034151.1' => 'oeu', 'Oeu034152.1' => 'oeu', 'Oeu034588.2' => 'oeu', 'Oeu050846.1' => 'oeu', 'Oeu050849.2' => 'oeu', 'Oeu051063.2' => 'oeu', 'Oeu052368.1' => 'oeu', 'Oeu052370.1' => 'oeu', 'Os01g0210400' => 'osa', 'Os01g0304300' => 'osa', 'Os01g0749100' => 'osa', 'Os02g0745800' => 'osa', 'Os03g0769050' => 'osa', 'Os05g0531500' => 'osa', 'Os06g0724300' => 'osa', 'Os11g0198100' => 'osa', 'Peaxi162Scf00069g01425' => 'pax', 'Peaxi162Scf00280g00811' => 'pax', 'Peaxi162Scf00310g00615' => 'pax', 'Peaxi162Scf00362g00542' => 'pax', 'Peaxi162Scf00461g00310' => 'pax', 'Peaxi162Scf00530g00118' => 'pax', 'Peaxi162Scf00541g00057' => 'pax', 'Peaxi162Scf00661g00017' => 'pax', 'Peaxi162Scf00926g00027' => 'pax', 'Peaxi162Scf01064g00263' => 'pax', 'Peaxi162Scf01211g00135' => 'pax', 'PGR004G2336' => 'pgr', 'PGR042G0327' => 'pgr', 'PGR042G1957' => 'pgr', 'PGR042G2003' => 'pgr', 'PGR042G3929' => 'pgr', 'PGR083G1137' => 'pgr', 'PGR083G1364' => 'pgr', 'PGSC0003DMG400003381' => 'stu', 'PGSC0003DMG400003417' => 'stu', 'PGSC0003DMG400008981' => 'stu', 'PGSC0003DMG400012417' => 'stu', 'PGSC0003DMG400012823' => 'stu', 'PGSC0003DMG400016885' => 'stu', 'PGSC0003DMG400022812' => 'stu', 'PGSC0003DMG400029726' => 'stu', 'PGSC0003DMG401009243' => 'stu', 'PGSC0003DMG401031505' => 'stu', 'PGSC0003DMG402031505' => 'stu', 'Phvul.001G017600' => 'pvu', 'Phvul.002G193500' => 'pvu', 'Phvul.002G228900' => 'pvu', 'Phvul.002G236800' => 'pvu', 'Phvul.003G049500' => 'pvu', 'Phvul.005G072000' => 'pvu', 'Phvul.006G164800' => 'pvu', 'Phvul.006G185100' => 'pvu', 'Phvul.007G090000' => 'pvu', 'Potri.001G399800' => 'ptr', 'Potri.002G149900' => 'ptr', 'Potri.004G044100' => 'ptr', 'Potri.004G177600' => 'ptr', 'Potri.009G138000' => 'ptr', 'Potri.010G094000' => 'ptr', 'Potri.011G053000' => 'ptr', 'Potri.011G119300' => 'ptr', 'Potri.013G113700' => 'ptr', 'Potri.018G107800' => 'ptr', 'Potri.019G084100' => 'ptr', 'Pp3c14_23720' => 'ppa', 'Pp3c16_6340' => 'ppa', 'Pp3c23_13420' => 'ppa', 'Pp3c24_2740' => 'ppa', 'Pp3c25_860' => 'ppa', 'Pp3c8_21750' => 'ppa', 'Prupe.1G273000' => 'ppe', 'Prupe.1G273700' => 'ppe', 'Prupe.1G274100' => 'ppe', 'Prupe.2G023300' => 'ppe', 'Prupe.4G048000' => 'ppe', 'Prupe.4G080400' => 'ppe', 'Prupe.4G181200' => 'ppe', 'Prupe.8G056900' => 'ppe', 'Prupe.8G168700' => 'ppe', 'Psat1g189080' => 'psa', 'Psat1g204760' => 'psa', 'Psat4g175560' => 'psa', 'Psat4g177720' => 'psa', 'Psat5g244240' => 'psa', 'Psat6g010720' => 'psa', 'Psat6g187200' => 'psa', 'Psat7g072040' => 'psa', 'PSO017G3501' => 'pso', 'PSO063G2148' => 'pso', 'PSO063G5608' => 'pso', 'PSO210G6392' => 'pso', 'PSO541G2319' => 'pso', 'PSO541G2836' => 'pso', 'PSO541G4012' => 'pso', 'PSO541G6253' => 'pso', 'PSO675G0580' => 'pso', 'PSO675G0856' => 'pso', 'PSO675G5635' => 'pso', 'PSO675G9157' => 'pso', 'PSO832G1660' => 'pso', 'PSO832G1969' => 'pso', 'QL02p007186' => 'qlo', 'QL02p033904' => 'qlo', 'QL03p064391' => 'qlo', 'QL05p040593' => 'qlo', 'QL05p058242' => 'qlo', 'QL08p021825' => 'qlo', 'QL11p004981' => 'qlo', 'RcHm_v2.0_Chr1g0318301' => 'rch', 'RcHm_v2.0_Chr4g0418501' => 'rch', 'RcHm_v2.0_Chr4g0439971' => 'rch', 'RcHm_v2.0_Chr5g0008541' => 'rch', 'RcHm_v2.0_Chr5g0014101' => 'rch', 'RcHm_v2.0_Chr5g0014131' => 'rch', 'RcHm_v2.0_Chr5g0033621' => 'rch', 'RcHm_v2.0_Chr6g0272041' => 'rch', 'RcHm_v2.0_Chr6g0278831' => 'rch', 'Rhsim02G0130400' => 'rsi', 'Rhsim02G0171100' => 'rsi', 'Rhsim05G0053000' => 'rsi', 'Rhsim05G0053100' => 'rsi', 'Rhsim06G0096500' => 'rsi', 'Rhsim06G0096600' => 'rsi', 'Rhsim06G0199100' => 'rsi', 'Rhsim12G0062300' => 'rsi', 'Rhsim12G0062800' => 'rsi', 'Sabra02G0118600' => 'sbr', 'Sabra04G0027300' => 'sbr', 'Sabra04G0119500' => 'sbr', 'Sabra08G0112500' => 'sbr', 'Sabra11G0036800' => 'sbr', 'Sabra11G0103800' => 'sbr', 'Sabra13G0096300' => 'sbr', 'Sabra16G0262300' => 'sbr', 'Sabra18G0091700' => 'sbr', 'Sabra19G0095400' => 'sbr', 'SalBow6G3080' => 'sbo', 'SalBow7G1157' => 'sbo', 'SalBow7G2123' => 'sbo', 'SalBow7G2285' => 'sbo', 'SalBow7G3537' => 'sbo', 'SalBow8G2947' => 'sbo', 'SalBow8G4463' => 'sbo', 'SalBow8G5466' => 'sbo', 'Sc01g0001750' => 'sci', 'Sc02g0006640' => 'sci', 'Sc02g0006670' => 'sci', 'Sc04g0008220' => 'sci', 'Sc05g0006190' => 'sci', 'Sc08g0002760' => 'sci', 'Sc17g0006170' => 'sci', 'Sc22g0002050' => 'sci', 'Sc23g0001190' => 'sci', 'Sc24g0000980' => 'sci', 'Sed0006245' => 'sed', 'Sed0007543' => 'sed', 'Sed0009411' => 'sed', 'Sed0010765' => 'sed', 'Sed0012944' => 'sed', 'Sed0014682' => 'sed', 'Sed0016174' => 'sed', 'Sed0016796' => 'sed', 'Sed0020317' => 'sed', 'Sed0021467' => 'sed', 'SEGI_01316' => 'sgi', 'SEGI_03374' => 'sgi', 'SEGI_16265' => 'sgi', 'SEGI_18569' => 'sgi', 'SEGI_20351' => 'sgi', 'SEGI_26395' => 'sgi', 'SEGI_29469' => 'sgi', 'SEGI_34771' => 'sgi', 'SEGI_36769' => 'sgi', 'SEGI_37139' => 'sgi', 'SGA_v2.0_scaffold100G29687' => 'sas', 'SGA_v2.0_scaffold118G32472' => 'sas', 'SGA_v2.0_scaffold14G07051' => 'sas', 'SGA_v2.0_scaffold183G39845' => 'sas', 'SGA_v2.0_scaffold1G00174' => 'sas', 'SGA_v2.0_scaffold22G09714' => 'sas', 'SGA_v2.0_scaffold333G48992' => 'sas', 'SGA_v2.0_scaffold46G17491' => 'sas', 'SGA_v2.0_scaffold49G18294' => 'sas', 'SGA_v2.0_scaffold63G21658' => 'sas', 'SHI01741' => 'shi', 'SHI05771' => 'shi', 'SHI18077' => 'shi', 'SHI20525' => 'shi', 'SHI20527' => 'shi', 'SHI20528' => 'shi', 'SMO172G0185' => 'smo', 'SMO198G0020' => 'smo', 'SMO351G0006' => 'smo', 'SMO356G0118' => 'smo', 'SMO358G0296' => 'smo', 'SMO367G0079' => 'smo', 'SMO367G1277' => 'smo', 'Solyc01g014220.3' => 'sly', 'Solyc01g111770.2' => 'sly', 'Solyc02g078180.3' => 'sly', 'Solyc03g006430.3' => 'sly', 'Solyc03g006456.1' => 'sly', 'Solyc03g079860.2' => 'sly', 'Solyc04g079770.3' => 'sly', 'Solyc05g007430.4' => 'sly', 'Solyc07g063150.3' => 'sly', 'Solyc08g016620.3' => 'sly', 'Solyc09g057590.3' => 'sly', 'Solyc09g057600.1' => 'sly', 'Solyc10g009050.3' => 'sly', 'Solyc11g017420.2' => 'sly', 'Sopen01g053810' => 'spe', 'Sopen02g023040' => 'spe', 'Sopen03g002440' => 'spe', 'Sopen04g033350' => 'spe', 'Sopen05g003310' => 'spe', 'Sopen07g004050' => 'spe', 'Sopen07g031340' => 'spe', 'Sopen08g006990' => 'spe', 'Sopen10g004830' => 'spe', 'Sopen11g009370' => 'spe', 'Sp1g24450' => 'spa', 'Sp1g29670' => 'spa', 'Sp1g39600' => 'spa', 'Sp2g11080' => 'spa', 'Sp2g13970' => 'spa', 'Sp4g16130' => 'spa', 'Sp6g13080' => 'spa', 'Sp7g37270' => 'spa', 'TAR371G0065' => 'tar', 'TAR376G0340' => 'tar', 'TAR376G0435' => 'tar', 'TAR381G0002' => 'tar', 'TAR381G1236' => 'tar', 'TAR624G0055' => 'tar', 'TAR624G0324' => 'tar', 'TAR624G0696' => 'tar', 'TAR624G0906' => 'tar', 'TAR625G0107' => 'tar', 'TAR626G0015' => 'tar', 'TAR626G1356' => 'tar', 'TAR627G0888' => 'tar', 'TAR628G0399' => 'tar', 'TAR628G1327' => 'tar', 'TAR629G2831' => 'tar', 'TAR629G2874' => 'tar', 'TAR633G1432' => 'tar', 'TAR633G2771' => 'tar', 'THA.LOC104803394' => 'tha', 'THA.LOC104805153' => 'tha', 'THA.LOC104806784' => 'tha', 'THA.LOC104810473' => 'tha', 'THA.LOC104813100' => 'tha', 'THA.LOC104814215' => 'tha', 'THA.LOC104815554' => 'tha', 'THA.LOC104820544' => 'tha', 'THA.LOC104824754' => 'tha', 'THA.LOC104827717' => 'tha', 'Thecc.02G031400' => 'tca', 'Thecc.02G055900' => 'tca', 'Thecc.02G350800' => 'tca', 'Thecc.06G150900' => 'tca', 'Thecc.06G186600' => 'tca', 'Thecc.07G089600' => 'tca', 'Thecc.08G020400' => 'tca', 'Thecc.08G182100' => 'tca', 'Thhalv10000873m.g' => 'esa', 'Thhalv10004185m.g' => 'esa', 'Thhalv10006981m.g' => 'esa', 'Thhalv10007204m.g' => 'esa', 'Thhalv10011374m.g' => 'esa', 'Thhalv10013482m.g' => 'esa', 'Thhalv10017801m.g' => 'esa', 'Thhalv10024983m.g' => 'esa', 'TPR.G12072' => 'tpr', 'TPR.G15769' => 'tpr', 'TPR.G16504' => 'tpr', 'TPR.G16506' => 'tpr', 'TPR.G24345' => 'tpr', 'TPR.G26666' => 'tpr', 'TPR.G27320' => 'tpr', 'TPR.G31819' => 'tpr', 'TPR.G38879' => 'tpr', 'TPR.G39015' => 'tpr', 'TPR.G8819' => 'tpr', 'TWI09G0924' => 'twi', 'TWI12G0811' => 'twi', 'TWI12G1294' => 'twi', 'TWI31G0150' => 'twi', 'TWI36G1262' => 'twi', 'TWI38G1287' => 'twi', 'TWI38G1633' => 'twi', 'TWI38G1982' => 'twi', 'TWI39G0116' => 'twi', 'TWI60G1011' => 'twi', 'TWI63G0171' => 'twi', 'TWI73G0839' => 'twi', 'TWI79G1511' => 'twi', 'unitig_0.g915' => 'ugi', 'unitig_0.g916' => 'ugi', 'unitig_21.g20219' => 'ugi', 'unitig_21.g20416' => 'ugi', 'unitig_578.g16132' => 'ugi', 'unitig_578.g16718' => 'ugi', 'unitig_62.g23481' => 'ugi', 'unitig_744.g24535' => 'ugi', 'unitig_749.g13525' => 'ugi', 'vmacro01248' => 'vma', 'vmacro02290' => 'vma', 'vmacro10946' => 'vma', 'vmacro11865' => 'vma', 'vmacro12493' => 'vma', 'vmacro17322' => 'vma', 'vmacro21599' => 'vma', 'vmacro23041' => 'vma', 'VMungo0251G0004' => 'vmu', 'VMungo0251G2639' => 'vmu', 'VMungo0251G2967' => 'vmu', 'VMungo0540G0864' => 'vmu', 'VMungo0540G1569' => 'vmu', 'VMungo0647G0317' => 'vmu', 'VMungo0720G1373' => 'vmu', 'VMungo0720G1508' => 'vmu', 'VMungo1080G0485' => 'vmu', 'VMungo1215G3177' => 'vmu', 'Zm00001eb112600' => 'zma', 'Zm00001eb120220' => 'zma', 'Zm00001eb153240' => 'zma', 'Zm00001eb168880' => 'zma', 'Zm00001eb213920' => 'zma', 'Zm00001eb228280' => 'zma', 'Zm00001eb254580' => 'zma', 'Zm00001eb272180' => 'zma', 'Zm00001eb293190' => 'zma', 'Zm00001eb322930' => 'zma', 'Zm00001eb353360' => 'zma', 'Zm00001eb353390' => 'zma', 'Zm00001eb353430' => 'zma', 'Zm00001eb353440' => 'zma', 'Zm00001eb353780' => 'zma' ) $gf_id = 'HOM05D000499' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000499' ) $data_identifier = 'HOM05D000499' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 29, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 12, 'amhyb' => (int) 8, 'aly' => (int) 12, 'aox' => (int) 9, 'arhy' => (int) 26, 'ath' => (int) 8, 'atr' => (int) 7, 'acertr' => (int) 10, 'cqu' => (int) 15, 'bca' => (int) 29, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 11, 'cansat' => (int) 8, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 9, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 8, 'cpa' => (int) 10, 'csa' => (int) 7, 'camsi' => (int) 20, 'dca' => (int) 8, 'din' => (int) 12, 'dzi' => (int) 14, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 6, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 38, 'gra' => (int) 16, 'vvi' => (int) 8, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 5, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 11, 'lja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 11, 'mpo' => (int) 3, 'mbi' => (int) 14, 'mdo' => (int) 14, 'mtr' => (int) 8, 'cme' => (int) 9, 'egut' => (int) 9, 'ama' => (int) 11, 'nta' => (int) 17, 'nnu' => (int) 11, 'oeu' => (int) 18, 'osa' => (int) 8, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 6, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 9, 'rsi' => (int) 9, 'sbr' => (int) 10, 'sbo' => (int) 8, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 10, 'sas' => (int) 10, 'shi' => (int) 6, 'smo' => (int) 7, 'sly' => (int) 14, 'spe' => (int) 10, 'spa' => (int) 8, 'tar' => (int) 19, 'tha' => (int) 10, 'tca' => (int) 8, 'esa' => (int) 8, 'tpr' => (int) 11, 'twi' => (int) 13, 'ugi' => (int) 9, 'vma' => (int) 8, 'vmu' => (int) 10, 'zma' => (int) 15 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb353780' $species_info = array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ) $local_species = 'ppa' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000499', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1066', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p29780' => 'bna', 'A02p33180' => 'bna', 'A03p16470' => 'bna', 'A03p66010' => 'bna', 'A04p25970' => 'bna', 'A06p01270' => 'bna', 'A06p46080' => 'bna', 'A07p11400' => 'bna', 'A08p01840' => 'bna', 'A08p08230' => 'bna', 'A08p25740' => 'bna', 'A09p32070' => 'bna', 'A09p37830' => 'bna', 'A09p42840' => 'bna', 'A09p42850' => 'bna', 'Aa31LG10G2060' => 'aar', 'Aa31LG2G7410' => 'aar', 'Aa31LG6G10200' => 'aar', 'Aa31LG6G16680' => 'aar', 'Aa31LG6G8470' => 'aar', 'Aa31LG9G12730' => 'aar', 'Aa31LG9G13680' => 'aar', 'Aa31LG9G14920' => 'aar', 'Aa31LG9G6650' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4977' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5467' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3254' => 'aag', 'Actinidia02578' => 'ach', 'Actinidia07693' => 'ach', 'Actinidia08413' => 'ach', 'Actinidia08414' => 'ach', 'Actinidia15289' => 'ach', 'Actinidia19871' => 'ach', 'Actinidia21475' => 'ach', 'Actinidia22576' => 'ach', 'Actinidia28327' => 'ach', 'Actinidia32491' => 'ach', 'Actinidia39463' => 'ach', 'Actinidia39571' => 'ach', 'Ah.01g013750' => 'amhyb', 'Ah.01g023210' => 'amhyb', 'Ah.04g164850' => 'amhyb', 'Ah.05g178060' => 'amhyb', 'Ah.07g204270' => 'amhyb', 'Ah.07g208480' => 'amhyb', 'Ah.09g237410' => 'amhyb', 'Ah.14g089460' => 'amhyb', 'AL1G41790' => 'aly', 'AL1G49050' => 'aly', 'AL1G53810' => 'aly', 'AL1G61400' => 'aly', 'AL4G18580' => 'aly', 'AL5G12510' => 'aly', 'AL5G12540' => 'aly', 'AL6G43230' => 'aly', 'AL7G10370' => 'aly', 'AL7G19250' => 'aly', 'AL8G12240' => 'aly', 'AL8G18540' => 'aly', 'Aqoxy1G02409' => 'aox', 'Aqoxy2G03993' => 'aox', 'Aqoxy3G03357' => 'aox', 'Aqoxy4G00785' => 'aox', 'Aqoxy5G02598' => 'aox', 'Aqoxy6G00132' => 'aox', 'Aqoxy7G01776' => 'aox', 'Aqoxy7G02316' => 'aox', 'Aqoxy7G03973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.12AFKW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B8730' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27IQR1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3F75VG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3RE0GA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41TCQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.527VTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FIR39' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5W8UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DA38EV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ63HS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H1I32C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HC27T5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4M8AP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7N3CZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9UVDZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LS1NQA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT1D4B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SKC4TM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCFV76' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF9Q1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQWD9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1ZM88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WE07RT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YCK7VH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJE6Q6' => 'arhy', 'AT1G28240' => 'ath', 'AT1G34550' => 'ath', 'AT1G53040' => 'ath', 'AT2G02910' => 'ath', 'AT4G09630' => 'ath', 'AT4G38500' => 'ath', 'AT5G42660' => 'ath', 'AT5G46220' => 'ath', 'ATR0152G026' => 'atr', 'ATR0564G343' => 'atr', 'ATR0706G151' => 'atr', 'ATR0733G207' => 'atr', 'ATR0751G234' => 'atr', 'ATR0807G048' => 'atr', 'ATR1091G084' => 'atr', 'Atru.chr10.1229' => 'acertr', 'Atru.chr10.1230' => 'acertr', 'Atru.chr10.1874' => 'acertr', 'Atru.chr11.1808' => 'acertr', 'Atru.chr13.1795' => 'acertr', 'Atru.chr13.570' => 'acertr', 'Atru.chr2.2608' => 'acertr', 'Atru.chr2.2609' => 'acertr', 'Atru.chr5.3428' => 'acertr', 'Atru.chr8.1171' => 'acertr', 'AUR62004651' => 'cqu', 'AUR62008675' => 'cqu', 'AUR62010014' => 'cqu', 'AUR62013004' => 'cqu', 'AUR62014825' => 'cqu', 'AUR62015015' => 'cqu', 'AUR62015151' => 'cqu', 'AUR62017020' => 'cqu', 'AUR62019422' => 'cqu', 'AUR62023570' => 'cqu', 'AUR62025571' => 'cqu', 'AUR62029098' => 'cqu', 'AUR62033863' => 'cqu', 'AUR62034296' => 'cqu', 'AUR62040075' => 'cqu', 'BcaB02g07334' => 'bca', 'BcaB02g10575' => 'bca', 'BcaB03g12119' => 'bca', 'BcaB03g12120' => 'bca', 'BcaB03g13945' => 'bca', 'BcaB04g17123' => 'bca', 'BcaB04g17867' => 'bca', 'BcaB04g19839' => 'bca', 'BcaB07g30317' => 'bca', 'BcaB07g32432' => 'bca', 'BcaB07g33362' => 'bca', 'BcaB08g36611' => 'bca', 'BcaC01g00028' => 'bca', 'BcaC01g01356' => 'bca', 'BcaC01g02034' => 'bca', 'BcaC01g06051' => 'bca', 'BcaC03g16839' => 'bca', 'BcaC03g17176' => 'bca', 'BcaC05g26829' => 'bca', 'BcaC06g31490' => 'bca', 'BcaC06g35344' => 'bca', 'BcaC06g36570' => 'bca', 'BcaC07g37537' => 'bca', 'BcaC08g43491' => 'bca', 'BcaC08g43773' => 'bca', 'BcaNung00234' => 'bca', 'BcaNung01982' => 'bca', 'BcaNung03707' => 'bca', 'BcaNung06454' => 'bca', 'BolC2t10762H' => 'bol', 'BolC2t11191H' => 'bol', 'BolC3t14322H' => 'bol', 'BolC3t19747H' => 'bol', 'BolC3t21425H' => 'bol', 'BolC4t27800H' => 'bol', 'BolC5t31423H' => 'bol', 'BolC6t35951H' => 'bol', 'BolC6t36282H' => 'bol', 'BolC7t40678H' => 'bol', 'BolC7t40679H' => 'bol', 'BolC7t42222H' => 'bol', 'BolC7t43492H' => 'bol', 'BolC7t46785H' => 'bol', 'BolC8t47853H' => 'bol', 'BolC9t56805H' => 'bol', 'BraA02t08000Z' => 'bra', 'BraA02t08341Z' => 'bra', 'BraA03t10936Z' => 'bra', 'BraA03t15657Z' => 'bra', 'BraA04t18100Z' => 'bra', 'BraA05t20523Z' => 'bra', 'BraA06t23353Z' => 'bra', 'BraA06t27473Z' => 'bra', 'BraA06t27769Z' => 'bra', 'BraA07t28928Z' => 'bra', 'BraA08t32236Z' => 'bra', 'BraA08t32841Z' => 'bra', 'BraA08t34524Z' => 'bra', 'BraA09t38742Z' => 'bra', 'BraA09t39295Z' => 'bra', 'C02p47180' => 'bna', 'C02p50990' => 'bna', 'C03p19360' => 'bna', 'C03p74950' => 'bna', 'C03p91000' => 'bna', 'C04p63260' => 'bna', 'C05p27050' => 'bna', 'C06p08750' => 'bna', 'C06p11490' => 'bna', 'C07p02820' => 'bna', 'C07p17180' => 'bna', 'C07p29440' => 'bna', 'C07p63730' => 'bna', 'C09p39260' => 'bna', 'CAN.G1164.34' => 'can', 'CAN.G1164.39' => 'can', 'CAN.G1530.3' => 'can', 'CAN.G162.61' => 'can', 'CAN.G176.6' => 'can', 'CAN.G289.49' => 'can', 'CAN.G370.21' => 'can', 'CAN.G370.22' => 'can', 'CAN.G371.117' => 'can', 'CAN.G58.37' => 'can', 'CAN.G588.98' => 'can', 'CANSAT21G2266' => 'cansat', 'CANSAT25G2799' => 'cansat', 'CANSAT35G0862' => 'cansat', 'CANSAT35G1704' => 'cansat', 'CANSAT35G1760' => 'cansat', 'CANSAT56G3971' => 'cansat', 'CANSAT56G4116' => 'cansat', 'CANSAT80G1259' => 'cansat', 'CARHR027730' => 'chi', 'CARHR033880' => 'chi', 'CARHR043270' => 'chi', 'CARHR145330' => 'chi', 'CARHR145340' => 'chi', 'CARHR175570' => 'chi', 'CARHR181570' => 'chi', 'CARHR258470' => 'chi', 'CARHR260490' => 'chi', 'CARHR294220' => 'chi', 'Carub.0001s2668' => 'cru', 'Carub.0001s3257' => 'cru', 'Carub.0001s4220' => 'cru', 'Carub.0005s0179' => 'cru', 'Carub.0006s2807' => 'cru', 'Carub.0007s0039' => 'cru', 'Carub.0008s0169' => 'cru', 'Carub.0008s0636' => 'cru', 'Ca_00338_v3' => 'car', 'Ca_00542_v3' => 'car', 'Ca_01844_v3' => 'car', 'Ca_10611_v3' => 'car', 'Ca_13326_v3' => 'car', 'Ca_17944_v3' => 'car', 'Ca_18546_v3' => 'car', 'Ca_24219_v3' => 'car', 'Ca_29972_v3' => 'car', 'CBR_g3681' => 'cbr', 'CBR_g40021' => 'cbr', 'Cc01_g08140' => 'ccan', 'Cc02_g13410' => 'ccan', 'Cc02_g37480' => 'ccan', 'Cc05_g12030' => 'ccan', 'Cc09_g03370' => 'ccan', 'Cc09_g10300' => 'ccan', 'Cc10_g03530' => 'ccan', 'Cc10_g11380' => 'ccan', 'CDE01G0176' => 'cde', 'CDE02G0675' => 'cde', 'CDE02G0942' => 'cde', 'CDE02G1153' => 'cde', 'CDE02G4177' => 'cde', 'CDE04G2117' => 'cde', 'CDE04G2736' => 'cde', 'CDE08G1161' => 'cde', 'CDE09G1238' => 'cde', 'Cfa000467' => 'cfa', 'Cfa000947' => 'cfa', 'Cfa004969' => 'cfa', 'Cfa005284' => 'cfa', 'Cfa008993' => 'cfa', 'Cfa018187' => 'cfa', 'Cfa018454' => 'cfa', 'Cfa020585' => 'cfa', 'Ciclev10000424m.g' => 'ccl', 'Ciclev10003605m.g' => 'ccl', 'Ciclev10007828m.g' => 'ccl', 'Ciclev10014620m.g' => 'ccl', 'Ciclev10015169m.g' => 'ccl', 'Ciclev10018291m.g' => 'ccl', 'Ciclev10028256m.g' => 'ccl', 'Ciclev10033822m.g' => 'ccl', 'CiPaw.05G060300' => 'cil', 'CiPaw.05G085000' => 'cil', 'CiPaw.06G083700' => 'cil', 'CiPaw.06G120300' => 'cil', 'CiPaw.09G060500' => 'cil', 'CiPaw.09G123800' => 'cil', 'CiPaw.11G169700' => 'cil', 'CiPaw.12G118300' => 'cil', 'CiPaw.15G071000' => 'cil', 'CiPaw.15G081900' => 'cil', 'ClCG01G024610' => 'cla', 'ClCG03G006070' => 'cla', 'ClCG05G019250' => 'cla', 'ClCG09G009500' => 'cla', 'ClCG11G008200' => 'cla', 'ClCG11G018080' => 'cla', 'COL.COLO4_17373' => 'col', 'COL.COLO4_22994' => 'col', 'COL.COLO4_26389' => 'col', 'COL.COLO4_27170' => 'col', 'COL.COLO4_31074' => 'col', 'COL.COLO4_31465' => 'col', 'COL.COLO4_36438' => 'col', 'COL.COLO4_36439' => 'col', 'Cpa.g.c38781' => 'cpa', 'Cpa.g.sc128.12' => 'cpa', 'Cpa.g.sc166.7' => 'cpa', 'Cpa.g.sc166.8' => 'cpa', 'Cpa.g.sc20.111' => 'cpa', 'Cpa.g.sc27.31' => 'cpa', 'Cpa.g.sc64.36' => 'cpa', 'Cpa.g.sc64.37' => 'cpa', 'Cpa.g.sc66.49' => 'cpa', 'Cpa.g.sc80.64' => 'cpa', 'CsaV3_1G012320' => 'csa', 'CsaV3_2G008480' => 'csa', 'CsaV3_2G033450' => 'csa', 'CsaV3_3G044830' => 'csa', 'CsaV3_4G033710' => 'csa', 'CsaV3_6G051730' => 'csa', 'CsaV3_7G025350' => 'csa', 'CSS0001067' => 'camsi', 'CSS0005996' => 'camsi', 'CSS0006590' => 'camsi', 'CSS0009673' => 'camsi', 'CSS0010201' => 'camsi', 'CSS0010549' => 'camsi', 'CSS0011364' => 'camsi', 'CSS0014473' => 'camsi', 'CSS0014961' => 'camsi', 'CSS0020191' => 'camsi', 'CSS0021165' => 'camsi', 'CSS0022306' => 'camsi', 'CSS0030591' => 'camsi', 'CSS0030696' => 'camsi', 'CSS0032653' => 'camsi', 'CSS0037487' => 'camsi', 'CSS0041102' => 'camsi', 'CSS0041261' => 'camsi', 'CSS0046246' => 'camsi', 'CSS0049256' => 'camsi', 'DCAR_004075' => 'dca', 'DCAR_011538' => 'dca', 'DCAR_019553' => 'dca', 'DCAR_020952' => 'dca', 'DCAR_021739' => 'dca', 'DCAR_027407' => 'dca', 'DCAR_027913' => 'dca', 'DCAR_028066' => 'dca', 'Dinv05899' => 'din', 'Dinv07563' => 'din', 'Dinv08010' => 'din', 'Dinv14125' => 'din', 'Dinv20172' => 'din', 'Dinv30743' => 'din', 'Dinv31229' => 'din', 'Dinv34162' => 'din', 'Dinv36028' => 'din', 'Dinv39368' => 'din', 'Dinv40565' => 'din', 'Dinv41706' => 'din', 'Duzib052G0089' => 'dzi', 'Duzib116G0641' => 'dzi', 'Duzib132G0069' => 'dzi', 'Duzib132G1219' => 'dzi', 'Duzib147G0278' => 'dzi', 'Duzib160G0480' => 'dzi', 'Duzib170G0661' => 'dzi', 'Duzib177G0591' => 'dzi', 'Duzib187G1353' => 'dzi', 'Duzib192G0858' => 'dzi', 'Duzib192G0883' => 'dzi', 'Duzib213G0506' => 'dzi', 'Duzib235G0289' => 'dzi', 'Duzib251G0422' => 'dzi', 'ECA232G3898' => 'eca', 'ECA233G5950' => 'eca', 'ECA234G1699' => 'eca', 'ECA234G2421' => 'eca', 'ECA236G0426' => 'eca', 'ECA236G4331' => 'eca', 'ECA248G2573' => 'eca', 'EL10Ac1g00077' => 'bvu', 'EL10Ac1g01746' => 'bvu', 'EL10Ac2g03464' => 'bvu', 'EL10Ac4g08176' => 'bvu', 'EL10Ac7g17521' => 'bvu', 'EL10Ac8g20386' => 'bvu', 'EL10Ac9g21343' => 'bvu', 'EL10Ac9g22688' => 'bvu', 'Eucgr.B03434' => 'egr', 'Eucgr.D00618' => 'egr', 'Eucgr.E02395' => 'egr', 'Eucgr.F01129' => 'egr', 'Eucgr.F02622' => 'egr', 'Eucgr.F04207' => 'egr', 'FAN01G0570' => 'fan', 'FAN03G3351' => 'fan', 'FAN06G3702' => 'fan', 'FAN07G2149' => 'fan', 'FAN10G3758' => 'fan', 'FAN11G1170' => 'fan', 'FAN11G2050' => 'fan', 'FAN11G2724' => 'fan', 'FAN12G1700' => 'fan', 'FAN12G2028' => 'fan', 'FAN15G1160' => 'fan', 'FAN15G3063' => 'fan', 'FAN16G2540' => 'fan', 'FAN16G3077' => 'fan', 'FAN16G3624' => 'fan', 'FAN17G0221' => 'fan', 'FAN20G2492' => 'fan', 'FAN20G2905' => 'fan', 'FAN21G0548' => 'fan', 'FAN21G1300' => 'fan', 'FAN22G0077' => 'fan', 'FAN22G1315' => 'fan', 'FAN24G1280' => 'fan', 'FAN24G1445' => 'fan', 'FAN24G3527' => 'fan', 'FAN25G0464' => 'fan', 'FAN25G2885' => 'fan', 'FAN25G3270' => 'fan', 'FAN27G1101' => 'fan', 'FAN27G2846' => 'fan', 'FAN27G3524' => 'fan', 'FvH4_2g11770' => 'fve', 'FvH4_2g15630' => 'fve', 'FvH4_3g05570' => 'fve', 'FvH4_3g09110' => 'fve', 'FvH4_3g19940' => 'fve', 'FvH4_4g04821' => 'fve', 'FvH4_4g31480' => 'fve', 'FvH4_7g01740' => 'fve', 'Glyma.05G130400' => 'gma', 'Glyma.05G156400' => 'gma', 'Glyma.07G197000' => 'gma', 'Glyma.08G085151' => 'gma', 'Glyma.08G114500' => 'gma', 'Glyma.08G300400' => 'gma', 'Glyma.10G215800' => 'gma', 'Glyma.12G224400' => 'gma', 'Glyma.13G179300' => 'gma', 'Glyma.13G218151' => 'gma', 'Glyma.13G238800' => 'gma', 'Glyma.13G276900' => 'gma', 'Glyma.14G078200' => 'gma', 'Glyma.15G074500' => 'gma', 'Glyma.15G094100' => 'gma', 'Glyma.17G247200' => 'gma', 'Glyma.18G120100' => 'gma', 'Glyma.20G176000' => 'gma', 'Gohir.A01G063600' => 'ghi', 'Gohir.A01G170301' => 'ghi', 'Gohir.A02G060500' => 'ghi', 'Gohir.A05G133850' => 'ghi', 'Gohir.A05G161400' => 'ghi', 'Gohir.A06G012900' => 'ghi', 'Gohir.A06G035901' => 'ghi', 'Gohir.A06G127100' => 'ghi', 'Gohir.A06G210500' => 'ghi', 'Gohir.A08G008650' => 'ghi', 'Gohir.A09G072700' => 'ghi', 'Gohir.A09G088301' => 'ghi', 'Gohir.A10G040600' => 'ghi', 'Gohir.A12G036300' => 'ghi', 'Gohir.A12G143350' => 'ghi', 'Gohir.A12G165500' => 'ghi', 'Gohir.A13G145700' => 'ghi', 'Gohir.D01G050000' => 'ghi', 'Gohir.D01G051366' => 'ghi', 'Gohir.D01G161350' => 'ghi', 'Gohir.D02G065900' => 'ghi', 'Gohir.D05G164200' => 'ghi', 'Gohir.D05G355500' => 'ghi', 'Gohir.D06G010400' => 'ghi', 'Gohir.D06G111250' => 'ghi', 'Gohir.D06G132000' => 'ghi', 'Gohir.D06G210500' => 'ghi', 'Gohir.D07G165675' => 'ghi', 'Gohir.D08G062240' => 'ghi', 'Gohir.D08G086101' => 'ghi', 'Gohir.D08G138060' => 'ghi', 'Gohir.D09G072300' => 'ghi', 'Gohir.D10G041400' => 'ghi', 'Gohir.D11G191020' => 'ghi', 'Gohir.D11G212066' => 'ghi', 'Gohir.D12G036300' => 'ghi', 'Gohir.D12G168600' => 'ghi', 'Gohir.D13G150600' => 'ghi', 'Gorai.001G057300' => 'gra', 'Gorai.002G069900' => 'gra', 'Gorai.002G200000' => 'gra', 'Gorai.003G067600' => 'gra', 'Gorai.005G074800' => 'gra', 'Gorai.006G087300' => 'gra', 'Gorai.008G037500' => 'gra', 'Gorai.008G181400' => 'gra', 'Gorai.009G169400' => 'gra', 'Gorai.009G387900' => 'gra', 'Gorai.010G013300' => 'gra', 'Gorai.010G153800' => 'gra', 'Gorai.010G255800' => 'gra', 'Gorai.011G043700' => 'gra', 'Gorai.011G198900' => 'gra', 'Gorai.013G168400' => 'gra', 'GSVIVG01005212001' => 'vvi', 'GSVIVG01006163001' => 'vvi', 'GSVIVG01009625001' => 'vvi', 'GSVIVG01014338001' => 'vvi', 'GSVIVG01020005001' => 'vvi', 'GSVIVG01021450001' => 'vvi', 'GSVIVG01023975001' => 'vvi', 'GSVIVG01034490001' => 'vvi', 'HanXRQChr04g0112071' => 'han', 'HanXRQChr05g0131151' => 'han', 'HanXRQChr09g0262371' => 'han', 'HanXRQChr09g0268401' => 'han', 'HanXRQChr10g0279241' => 'han', 'HanXRQChr10g0297961' => 'han', 'HanXRQChr11g0326231' => 'han', 'HanXRQChr11g0328471' => 'han', 'HanXRQChr16g0507941' => 'han', 'HanXRQChr17g0560211' => 'han', 'Haze_02108' => 'cav', 'Haze_02428' => 'cav', 'Haze_05593' => 'cav', 'Haze_06448' => 'cav', 'Haze_09427' => 'cav', 'Haze_12022' => 'cav', 'Haze_17612' => 'cav', 'Haze_17928' => 'cav', 'Hma1.2p1_0032F.1_g019250' => 'hma', 'Hma1.2p1_0163F.1_g072690' => 'hma', 'Hma1.2p1_0265F.1_g106710' => 'hma', 'Hma1.2p1_0286F.1_g113970' => 'hma', 'Hma1.2p1_0363F.1_g136640' => 'hma', 'Hma1.2p1_0584F.1_g183470' => 'hma', 'Hma1.2p1_0885F.1_g232570' => 'hma', 'HPP92_006022' => 'vpl', 'HPP92_007320' => 'vpl', 'HPP92_011521' => 'vpl', 'HPP92_019387' => 'vpl', 'HPP92_024038' => 'vpl', 'Hund05891' => 'sun', 'Hund06450' => 'sun', 'Hund12053' => 'sun', 'Hund16800' => 'sun', 'Hund21222' => 'sun', 'Hund22896' => 'sun', 'Hund23746' => 'sun', 'Hund27083' => 'sun', 'Lalb_Chr02g0141831' => 'lal', 'Lalb_Chr02g0141841' => 'lal', 'Lalb_Chr05g0220411' => 'lal', 'Lalb_Chr06g0162081' => 'lal', 'Lalb_Chr09g0327651' => 'lal', 'Lalb_Chr13g0295051' => 'lal', 'Lalb_Chr15g0086801' => 'lal', 'Lalb_Chr16g0383781' => 'lal', 'Lalb_Chr16g0383791' => 'lal', 'Lalb_Chr18g0055441' => 'lal', 'Lalb_Chr18g0059611' => 'lal', 'Lalb_Chr20g0109661' => 'lal', 'Lalb_Chr20g0109831' => 'lal', 'Lalb_Chr20g0121871' => 'lal', 'Lalb_Chr22g0355361' => 'lal', 'Lalb_Chr25g0286371' => 'lal', 'Lj1A1187G43' => 'lonja', 'Lj1A1205T50' => 'lonja', 'Lj1A800G33' => 'lonja', 'Lj1C1187T7' => 'lonja', 'Lj1C843T11' => 'lonja', 'Lj1g0010940' => 'lja', 'Lj2A288T69' => 'lonja', 'Lj3g0024276' => 'lja', 'Lj4A47T76' => 'lonja', 'Lj4g0005805' => 'lja', 'Lj4g0006097' => 'lja', 'Lj4g0008528' => 'lja', 'Lj4g0024907' => 'lja', 'Lj5g0012472' => 'lja', 'Lj5g0018648' => 'lja', 'Lj6C789G1' => 'lonja', 'Lj6g0004000' => 'lja', 'Lj7A292G67' => 'lonja', 'Lj7A292T64' => 'lonja', 'Lj9A400T58' => 'lonja', 'Lsat_1_v5_gn_1_126181' => 'lsa', 'Lsat_1_v5_gn_4_123041' => 'lsa', 'Lsat_1_v5_gn_4_133620' => 'lsa', 'Lsat_1_v5_gn_4_53221' => 'lsa', 'Lsat_1_v5_gn_4_71961' => 'lsa', 'Lsat_1_v5_gn_7_105241' => 'lsa', 'Lsat_1_v5_gn_7_21361' => 'lsa', 'Lsat_1_v5_gn_7_28860' => 'lsa', 'Lsat_1_v5_gn_7_31260' => 'lsa', 'Lsat_1_v5_gn_8_52801' => 'lsa', 'Manes.02G191400' => 'mes', 'Manes.03G110100' => 'mes', 'Manes.04G071100' => 'mes', 'Manes.05G100500' => 'mes', 'Manes.05G164700' => 'mes', 'Manes.15G087000' => 'mes', 'Manes.15G121500' => 'mes', 'Manes.16G028300' => 'mes', 'Manes.17G046100' => 'mes', 'Manes.17G069800' => 'mes', 'Manes.18G100500' => 'mes', 'Mapoly0002s0109' => 'mpo', 'Mapoly0024s0007' => 'mpo', 'Mapoly0089s0032' => 'mpo', 'MBI04_g42241_MAGBIO' => 'mbi', 'MBI05_g11988_MAGBIO' => 'mbi', 'MBI05_g35452_MAGBIO' => 'mbi', 'MBI07_g30179_MAGBIO' => 'mbi', 'MBI07_g35859_MAGBIO' => 'mbi', 'MBI07_g35860_MAGBIO' => 'mbi', 'MBI07_g37166_MAGBIO' => 'mbi', 'MBI08_g18172_MAGBIO' => 'mbi', 'MBI09_g08441_MAGBIO' => 'mbi', 'MBI13_g01676_MAGBIO' => 'mbi', 'MBI14_g42955_MAGBIO' => 'mbi', 'MBI16_g13161_MAGBIO' => 'mbi', 'MBI17_g27204_MAGBIO' => 'mbi', 'MBI19_g21595_MAGBIO' => 'mbi', 'MD00G1148400' => 'mdo', 'MD02G1301200' => 'mdo', 'MD03G1227800' => 'mdo', 'MD05G1041100' => 'mdo', 'MD05G1124800' => 'mdo', 'MD05G1284000' => 'mdo', 'MD05G1338800' => 'mdo', 'MD05G1338900' => 'mdo', 'MD07G1022800' => 'mdo', 'MD10G1047500' => 'mdo', 'MD10G1127500' => 'mdo', 'MD10G1262300' => 'mdo', 'MD10G1293800' => 'mdo', 'MD16G1074300' => 'mdo', 'Medtr1g021670' => 'mtr', 'Medtr1g096320' => 'mtr', 'Medtr2g013690' => 'mtr', 'Medtr2g019450' => 'mtr', 'Medtr2g085170' => 'mtr', 'Medtr4g088785' => 'mtr', 'Medtr8g055930' => 'mtr', 'Medtr8g085850' => 'mtr', 'MELO3C002605.2' => 'cme', 'MELO3C003891.2' => 'cme', 'MELO3C004012.2' => 'cme', 'MELO3C007134.2' => 'cme', 'MELO3C008118.2' => 'cme', 'MELO3C016700.2' => 'cme', 'MELO3C024127.2' => 'cme', 'MELO3C033361.2' => 'cme', 'MELO3C033362.2' => 'cme', 'Migut.C00430' => 'egut', 'Migut.C01246' => 'egut', 'Migut.E00101' => 'egut', 'Migut.H01486' => 'egut', 'Migut.H01939' => 'egut', 'Migut.K00360' => 'egut', 'Migut.M00910' => 'egut', 'Migut.M01139' => 'egut', 'Migut.N02677' => 'egut', 'MSTRG.13252' => 'ama', 'MSTRG.14701' => 'ama', 'MSTRG.1521' => 'ama', 'MSTRG.15884' => 'ama', 'MSTRG.16242' => 'ama', 'MSTRG.22285' => 'ama', 'MSTRG.22444' => 'ama', 'MSTRG.2349' => 'ama', 'MSTRG.26308' => 'ama', 'MSTRG.28296' => 'ama', 'MSTRG.9895' => 'ama', 'Nitab4.5_0000110g0060' => 'nta', 'Nitab4.5_0000420g0130' => 'nta', 'Nitab4.5_0000422g0030' => 'nta', 'Nitab4.5_0000560g0180' => 'nta', 'Nitab4.5_0000703g0100' => 'nta', 'Nitab4.5_0000786g0200' => 'nta', 'Nitab4.5_0001336g0020' => 'nta', 'Nitab4.5_0001796g0030' => 'nta', 'Nitab4.5_0003348g0060' => 'nta', 'Nitab4.5_0003698g0040' => 'nta', 'Nitab4.5_0003942g0090' => 'nta', 'Nitab4.5_0004775g0070' => 'nta', 'Nitab4.5_0004864g0030' => 'nta', 'Nitab4.5_0005615g0020' => 'nta', 'Nitab4.5_0009288g0030' => 'nta', 'Nitab4.5_0009341g0010' => 'nta', 'Nitab4.5_0009535g0010' => 'nta', 'Nn1g03995' => 'nnu', 'Nn1g04100' => 'nnu', 'Nn1g06530' => 'nnu', 'Nn3g16404' => 'nnu', 'Nn3g17212' => 'nnu', 'Nn3g20776' => 'nnu', 'Nn3g21923' => 'nnu', 'Nn5g27737' => 'nnu', 'Nn5g29461' => 'nnu', 'Nn7g38355' => 'nnu', 'Nn8g39873' => 'nnu', 'Oeu000548.2' => 'oeu', 'Oeu004672.1' => 'oeu', 'Oeu015605.2' => 'oeu', 'Oeu016092.1' => 'oeu', 'Oeu017879.3' => 'oeu', 'Oeu024910.1' => 'oeu', 'Oeu028965.1' => 'oeu', 'Oeu031269.1' => 'oeu', 'Oeu031270.1' => 'oeu', 'Oeu032535.1' => 'oeu', 'Oeu034151.1' => 'oeu', 'Oeu034152.1' => 'oeu', 'Oeu034588.2' => 'oeu', 'Oeu050846.1' => 'oeu', 'Oeu050849.2' => 'oeu', 'Oeu051063.2' => 'oeu', 'Oeu052368.1' => 'oeu', 'Oeu052370.1' => 'oeu', 'Os01g0210400' => 'osa', 'Os01g0304300' => 'osa', 'Os01g0749100' => 'osa', 'Os02g0745800' => 'osa', 'Os03g0769050' => 'osa', 'Os05g0531500' => 'osa', 'Os06g0724300' => 'osa', 'Os11g0198100' => 'osa', 'Peaxi162Scf00069g01425' => 'pax', 'Peaxi162Scf00280g00811' => 'pax', 'Peaxi162Scf00310g00615' => 'pax', 'Peaxi162Scf00362g00542' => 'pax', 'Peaxi162Scf00461g00310' => 'pax', 'Peaxi162Scf00530g00118' => 'pax', 'Peaxi162Scf00541g00057' => 'pax', 'Peaxi162Scf00661g00017' => 'pax', 'Peaxi162Scf00926g00027' => 'pax', 'Peaxi162Scf01064g00263' => 'pax', 'Peaxi162Scf01211g00135' => 'pax', 'PGR004G2336' => 'pgr', 'PGR042G0327' => 'pgr', 'PGR042G1957' => 'pgr', 'PGR042G2003' => 'pgr', 'PGR042G3929' => 'pgr', 'PGR083G1137' => 'pgr', 'PGR083G1364' => 'pgr', 'PGSC0003DMG400003381' => 'stu', 'PGSC0003DMG400003417' => 'stu', 'PGSC0003DMG400008981' => 'stu', 'PGSC0003DMG400012417' => 'stu', 'PGSC0003DMG400012823' => 'stu', 'PGSC0003DMG400016885' => 'stu', 'PGSC0003DMG400022812' => 'stu', 'PGSC0003DMG400029726' => 'stu', 'PGSC0003DMG401009243' => 'stu', 'PGSC0003DMG401031505' => 'stu', 'PGSC0003DMG402031505' => 'stu', 'Phvul.001G017600' => 'pvu', 'Phvul.002G193500' => 'pvu', 'Phvul.002G228900' => 'pvu', 'Phvul.002G236800' => 'pvu', 'Phvul.003G049500' => 'pvu', 'Phvul.005G072000' => 'pvu', 'Phvul.006G164800' => 'pvu', 'Phvul.006G185100' => 'pvu', 'Phvul.007G090000' => 'pvu', 'Potri.001G399800' => 'ptr', 'Potri.002G149900' => 'ptr', 'Potri.004G044100' => 'ptr', 'Potri.004G177600' => 'ptr', 'Potri.009G138000' => 'ptr', 'Potri.010G094000' => 'ptr', 'Potri.011G053000' => 'ptr', 'Potri.011G119300' => 'ptr', 'Potri.013G113700' => 'ptr', 'Potri.018G107800' => 'ptr', 'Potri.019G084100' => 'ptr', 'Pp3c14_23720' => 'ppa', 'Pp3c16_6340' => 'ppa', 'Pp3c23_13420' => 'ppa', 'Pp3c24_2740' => 'ppa', 'Pp3c25_860' => 'ppa', 'Pp3c8_21750' => 'ppa', 'Prupe.1G273000' => 'ppe', 'Prupe.1G273700' => 'ppe', 'Prupe.1G274100' => 'ppe', 'Prupe.2G023300' => 'ppe', 'Prupe.4G048000' => 'ppe', 'Prupe.4G080400' => 'ppe', 'Prupe.4G181200' => 'ppe', 'Prupe.8G056900' => 'ppe', 'Prupe.8G168700' => 'ppe', 'Psat1g189080' => 'psa', 'Psat1g204760' => 'psa', 'Psat4g175560' => 'psa', 'Psat4g177720' => 'psa', 'Psat5g244240' => 'psa', 'Psat6g010720' => 'psa', 'Psat6g187200' => 'psa', 'Psat7g072040' => 'psa', 'PSO017G3501' => 'pso', 'PSO063G2148' => 'pso', 'PSO063G5608' => 'pso', 'PSO210G6392' => 'pso', 'PSO541G2319' => 'pso', 'PSO541G2836' => 'pso', 'PSO541G4012' => 'pso', 'PSO541G6253' => 'pso', 'PSO675G0580' => 'pso', 'PSO675G0856' => 'pso', 'PSO675G5635' => 'pso', 'PSO675G9157' => 'pso', 'PSO832G1660' => 'pso', 'PSO832G1969' => 'pso', 'QL02p007186' => 'qlo', 'QL02p033904' => 'qlo', 'QL03p064391' => 'qlo', 'QL05p040593' => 'qlo', 'QL05p058242' => 'qlo', 'QL08p021825' => 'qlo', 'QL11p004981' => 'qlo', 'RcHm_v2.0_Chr1g0318301' => 'rch', 'RcHm_v2.0_Chr4g0418501' => 'rch', 'RcHm_v2.0_Chr4g0439971' => 'rch', 'RcHm_v2.0_Chr5g0008541' => 'rch', 'RcHm_v2.0_Chr5g0014101' => 'rch', 'RcHm_v2.0_Chr5g0014131' => 'rch', 'RcHm_v2.0_Chr5g0033621' => 'rch', 'RcHm_v2.0_Chr6g0272041' => 'rch', 'RcHm_v2.0_Chr6g0278831' => 'rch', 'Rhsim02G0130400' => 'rsi', 'Rhsim02G0171100' => 'rsi', 'Rhsim05G0053000' => 'rsi', 'Rhsim05G0053100' => 'rsi', 'Rhsim06G0096500' => 'rsi', 'Rhsim06G0096600' => 'rsi', 'Rhsim06G0199100' => 'rsi', 'Rhsim12G0062300' => 'rsi', 'Rhsim12G0062800' => 'rsi', 'Sabra02G0118600' => 'sbr', 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'Solyc03g079860.2' => 'sly', 'Solyc04g079770.3' => 'sly', 'Solyc05g007430.4' => 'sly', 'Solyc07g063150.3' => 'sly', 'Solyc08g016620.3' => 'sly', 'Solyc09g057590.3' => 'sly', 'Solyc09g057600.1' => 'sly', 'Solyc10g009050.3' => 'sly', 'Solyc11g017420.2' => 'sly', 'Sopen01g053810' => 'spe', 'Sopen02g023040' => 'spe', 'Sopen03g002440' => 'spe', 'Sopen04g033350' => 'spe', 'Sopen05g003310' => 'spe', 'Sopen07g004050' => 'spe', 'Sopen07g031340' => 'spe', 'Sopen08g006990' => 'spe', 'Sopen10g004830' => 'spe', 'Sopen11g009370' => 'spe', 'Sp1g24450' => 'spa', 'Sp1g29670' => 'spa', 'Sp1g39600' => 'spa', 'Sp2g11080' => 'spa', 'Sp2g13970' => 'spa', 'Sp4g16130' => 'spa', 'Sp6g13080' => 'spa', 'Sp7g37270' => 'spa', 'TAR371G0065' => 'tar', 'TAR376G0340' => 'tar', 'TAR376G0435' => 'tar', 'TAR381G0002' => 'tar', 'TAR381G1236' => 'tar', 'TAR624G0055' => 'tar', 'TAR624G0324' => 'tar', 'TAR624G0696' => 'tar', 'TAR624G0906' => 'tar', 'TAR625G0107' => 'tar', 'TAR626G0015' => 'tar', 'TAR626G1356' => 'tar', 'TAR627G0888' => 'tar', 'TAR628G0399' => 'tar', 'TAR628G1327' => 'tar', 'TAR629G2831' => 'tar', 'TAR629G2874' => 'tar', 'TAR633G1432' => 'tar', 'TAR633G2771' => 'tar', 'THA.LOC104803394' => 'tha', 'THA.LOC104805153' => 'tha', 'THA.LOC104806784' => 'tha', 'THA.LOC104810473' => 'tha', 'THA.LOC104813100' => 'tha', 'THA.LOC104814215' => 'tha', 'THA.LOC104815554' => 'tha', 'THA.LOC104820544' => 'tha', 'THA.LOC104824754' => 'tha', 'THA.LOC104827717' => 'tha', 'Thecc.02G031400' => 'tca', 'Thecc.02G055900' => 'tca', 'Thecc.02G350800' => 'tca', 'Thecc.06G150900' => 'tca', 'Thecc.06G186600' => 'tca', 'Thecc.07G089600' => 'tca', 'Thecc.08G020400' => 'tca', 'Thecc.08G182100' => 'tca', 'Thhalv10000873m.g' => 'esa', 'Thhalv10004185m.g' => 'esa', 'Thhalv10006981m.g' => 'esa', 'Thhalv10007204m.g' => 'esa', 'Thhalv10011374m.g' => 'esa', 'Thhalv10013482m.g' => 'esa', 'Thhalv10017801m.g' => 'esa', 'Thhalv10024983m.g' => 'esa', 'TPR.G12072' => 'tpr', 'TPR.G15769' => 'tpr', 'TPR.G16504' => 'tpr', 'TPR.G16506' => 'tpr', 'TPR.G24345' => 'tpr', 'TPR.G26666' => 'tpr', 'TPR.G27320' => 'tpr', 'TPR.G31819' => 'tpr', 'TPR.G38879' => 'tpr', 'TPR.G39015' => 'tpr', 'TPR.G8819' => 'tpr', 'TWI09G0924' => 'twi', 'TWI12G0811' => 'twi', 'TWI12G1294' => 'twi', 'TWI31G0150' => 'twi', 'TWI36G1262' => 'twi', 'TWI38G1287' => 'twi', 'TWI38G1633' => 'twi', 'TWI38G1982' => 'twi', 'TWI39G0116' => 'twi', 'TWI60G1011' => 'twi', 'TWI63G0171' => 'twi', 'TWI73G0839' => 'twi', 'TWI79G1511' => 'twi', 'unitig_0.g915' => 'ugi', 'unitig_0.g916' => 'ugi', 'unitig_21.g20219' => 'ugi', 'unitig_21.g20416' => 'ugi', 'unitig_578.g16132' => 'ugi', 'unitig_578.g16718' => 'ugi', 'unitig_62.g23481' => 'ugi', 'unitig_744.g24535' => 'ugi', 'unitig_749.g13525' => 'ugi', 'vmacro01248' => 'vma', 'vmacro02290' => 'vma', 'vmacro10946' => 'vma', 'vmacro11865' => 'vma', 'vmacro12493' => 'vma', 'vmacro17322' => 'vma', 'vmacro21599' => 'vma', 'vmacro23041' => 'vma', 'VMungo0251G0004' => 'vmu', 'VMungo0251G2639' => 'vmu', 'VMungo0251G2967' => 'vmu', 'VMungo0540G0864' => 'vmu', 'VMungo0540G1569' => 'vmu', 'VMungo0647G0317' => 'vmu', 'VMungo0720G1373' => 'vmu', 'VMungo0720G1508' => 'vmu', 'VMungo1080G0485' => 'vmu', 'VMungo1215G3177' => 'vmu', 'Zm00001eb112600' => 'zma', 'Zm00001eb120220' => 'zma', 'Zm00001eb153240' => 'zma', 'Zm00001eb168880' => 'zma', 'Zm00001eb213920' => 'zma', 'Zm00001eb228280' => 'zma', 'Zm00001eb254580' => 'zma', 'Zm00001eb272180' => 'zma', 'Zm00001eb293190' => 'zma', 'Zm00001eb322930' => 'zma', 'Zm00001eb353360' => 'zma', 'Zm00001eb353390' => 'zma', 'Zm00001eb353430' => 'zma', 'Zm00001eb353440' => 'zma', 'Zm00001eb353780' => 'zma' ), 'gf_id' => 'HOM05D000499', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000499' ), 'data_identifier' => 'HOM05D000499', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000499', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1066', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p29780' => 'bna', 'A02p33180' => 'bna', 'A03p16470' => 'bna', 'A03p66010' => 'bna', 'A04p25970' => 'bna', 'A06p01270' => 'bna', 'A06p46080' => 'bna', 'A07p11400' => 'bna', 'A08p01840' => 'bna', 'A08p08230' => 'bna', 'A08p25740' => 'bna', 'A09p32070' => 'bna', 'A09p37830' => 'bna', 'A09p42840' => 'bna', 'A09p42850' => 'bna', 'Aa31LG10G2060' => 'aar', 'Aa31LG2G7410' => 'aar', 'Aa31LG6G10200' => 'aar', 'Aa31LG6G16680' => 'aar', 'Aa31LG6G8470' => 'aar', 'Aa31LG9G12730' => 'aar', 'Aa31LG9G13680' => 'aar', 'Aa31LG9G14920' => 'aar', 'Aa31LG9G6650' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4977' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5467' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3254' => 'aag', 'Actinidia02578' => 'ach', 'Actinidia07693' => 'ach', 'Actinidia08413' => 'ach', 'Actinidia08414' => 'ach', 'Actinidia15289' => 'ach', 'Actinidia19871' => 'ach', 'Actinidia21475' => 'ach', 'Actinidia22576' => 'ach', 'Actinidia28327' => 'ach', 'Actinidia32491' => 'ach', 'Actinidia39463' => 'ach', 'Actinidia39571' => 'ach', 'Ah.01g013750' => 'amhyb', 'Ah.01g023210' => 'amhyb', 'Ah.04g164850' => 'amhyb', 'Ah.05g178060' => 'amhyb', 'Ah.07g204270' => 'amhyb', 'Ah.07g208480' => 'amhyb', 'Ah.09g237410' => 'amhyb', 'Ah.14g089460' => 'amhyb', 'AL1G41790' => 'aly', 'AL1G49050' => 'aly', 'AL1G53810' => 'aly', 'AL1G61400' => 'aly', 'AL4G18580' => 'aly', 'AL5G12510' => 'aly', 'AL5G12540' => 'aly', 'AL6G43230' => 'aly', 'AL7G10370' => 'aly', 'AL7G19250' => 'aly', 'AL8G12240' => 'aly', 'AL8G18540' => 'aly', 'Aqoxy1G02409' => 'aox', 'Aqoxy2G03993' => 'aox', 'Aqoxy3G03357' => 'aox', 'Aqoxy4G00785' => 'aox', 'Aqoxy5G02598' => 'aox', 'Aqoxy6G00132' => 'aox', 'Aqoxy7G01776' => 'aox', 'Aqoxy7G02316' => 'aox', 'Aqoxy7G03973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.12AFKW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B8730' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27IQR1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3F75VG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3RE0GA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41TCQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.527VTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FIR39' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5W8UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DA38EV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ63HS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H1I32C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HC27T5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4M8AP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7N3CZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9UVDZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LS1NQA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT1D4B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SKC4TM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCFV76' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF9Q1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQWD9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1ZM88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WE07RT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YCK7VH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJE6Q6' => 'arhy', 'AT1G28240' => 'ath', 'AT1G34550' => 'ath', 'AT1G53040' => 'ath', 'AT2G02910' => 'ath', 'AT4G09630' => 'ath', 'AT4G38500' => 'ath', 'AT5G42660' => 'ath', 'AT5G46220' => 'ath', 'ATR0152G026' => 'atr', 'ATR0564G343' => 'atr', 'ATR0706G151' => 'atr', 'ATR0733G207' => 'atr', 'ATR0751G234' => 'atr', 'ATR0807G048' => 'atr', 'ATR1091G084' => 'atr', 'Atru.chr10.1229' => 'acertr', 'Atru.chr10.1230' => 'acertr', 'Atru.chr10.1874' => 'acertr', 'Atru.chr11.1808' => 'acertr', 'Atru.chr13.1795' => 'acertr', 'Atru.chr13.570' => 'acertr', 'Atru.chr2.2608' => 'acertr', 'Atru.chr2.2609' => 'acertr', 'Atru.chr5.3428' => 'acertr', 'Atru.chr8.1171' => 'acertr', 'AUR62004651' => 'cqu', 'AUR62008675' => 'cqu', 'AUR62010014' => 'cqu', 'AUR62013004' => 'cqu', 'AUR62014825' => 'cqu', 'AUR62015015' => 'cqu', 'AUR62015151' => 'cqu', 'AUR62017020' => 'cqu', 'AUR62019422' => 'cqu', 'AUR62023570' => 'cqu', 'AUR62025571' => 'cqu', 'AUR62029098' => 'cqu', 'AUR62033863' => 'cqu', 'AUR62034296' => 'cqu', 'AUR62040075' => 'cqu', 'BcaB02g07334' => 'bca', 'BcaB02g10575' => 'bca', 'BcaB03g12119' => 'bca', 'BcaB03g12120' => 'bca', 'BcaB03g13945' => 'bca', 'BcaB04g17123' => 'bca', 'BcaB04g17867' => 'bca', 'BcaB04g19839' => 'bca', 'BcaB07g30317' => 'bca', 'BcaB07g32432' => 'bca', 'BcaB07g33362' => 'bca', 'BcaB08g36611' => 'bca', 'BcaC01g00028' => 'bca', 'BcaC01g01356' => 'bca', 'BcaC01g02034' => 'bca', 'BcaC01g06051' => 'bca', 'BcaC03g16839' => 'bca', 'BcaC03g17176' => 'bca', 'BcaC05g26829' => 'bca', 'BcaC06g31490' => 'bca', 'BcaC06g35344' => 'bca', 'BcaC06g36570' => 'bca', 'BcaC07g37537' => 'bca', 'BcaC08g43491' => 'bca', 'BcaC08g43773' => 'bca', 'BcaNung00234' => 'bca', 'BcaNung01982' => 'bca', 'BcaNung03707' => 'bca', 'BcaNung06454' => 'bca', 'BolC2t10762H' => 'bol', 'BolC2t11191H' => 'bol', 'BolC3t14322H' => 'bol', 'BolC3t19747H' => 'bol', 'BolC3t21425H' => 'bol', 'BolC4t27800H' => 'bol', 'BolC5t31423H' => 'bol', 'BolC6t35951H' => 'bol', 'BolC6t36282H' => 'bol', 'BolC7t40678H' => 'bol', 'BolC7t40679H' => 'bol', 'BolC7t42222H' => 'bol', 'BolC7t43492H' => 'bol', 'BolC7t46785H' => 'bol', 'BolC8t47853H' => 'bol', 'BolC9t56805H' => 'bol', 'BraA02t08000Z' => 'bra', 'BraA02t08341Z' => 'bra', 'BraA03t10936Z' => 'bra', 'BraA03t15657Z' => 'bra', 'BraA04t18100Z' => 'bra', 'BraA05t20523Z' => 'bra', 'BraA06t23353Z' => 'bra', 'BraA06t27473Z' => 'bra', 'BraA06t27769Z' => 'bra', 'BraA07t28928Z' => 'bra', 'BraA08t32236Z' => 'bra', 'BraA08t32841Z' => 'bra', 'BraA08t34524Z' => 'bra', 'BraA09t38742Z' => 'bra', 'BraA09t39295Z' => 'bra', 'C02p47180' => 'bna', 'C02p50990' => 'bna', 'C03p19360' => 'bna', 'C03p74950' => 'bna', 'C03p91000' => 'bna', 'C04p63260' => 'bna', 'C05p27050' => 'bna', 'C06p08750' => 'bna', 'C06p11490' => 'bna', 'C07p02820' => 'bna', 'C07p17180' => 'bna', 'C07p29440' => 'bna', 'C07p63730' => 'bna', 'C09p39260' => 'bna', 'CAN.G1164.34' => 'can', 'CAN.G1164.39' => 'can', 'CAN.G1530.3' => 'can', 'CAN.G162.61' => 'can', 'CAN.G176.6' => 'can', 'CAN.G289.49' => 'can', 'CAN.G370.21' => 'can', 'CAN.G370.22' => 'can', 'CAN.G371.117' => 'can', 'CAN.G58.37' => 'can', 'CAN.G588.98' => 'can', 'CANSAT21G2266' => 'cansat', 'CANSAT25G2799' => 'cansat', 'CANSAT35G0862' => 'cansat', 'CANSAT35G1704' => 'cansat', 'CANSAT35G1760' => 'cansat', 'CANSAT56G3971' => 'cansat', 'CANSAT56G4116' => 'cansat', 'CANSAT80G1259' => 'cansat', 'CARHR027730' => 'chi', 'CARHR033880' => 'chi', 'CARHR043270' => 'chi', 'CARHR145330' => 'chi', 'CARHR145340' => 'chi', 'CARHR175570' => 'chi', 'CARHR181570' => 'chi', 'CARHR258470' => 'chi', 'CARHR260490' => 'chi', 'CARHR294220' => 'chi', 'Carub.0001s2668' => 'cru', 'Carub.0001s3257' => 'cru', 'Carub.0001s4220' => 'cru', 'Carub.0005s0179' => 'cru', 'Carub.0006s2807' => 'cru', 'Carub.0007s0039' => 'cru', 'Carub.0008s0169' => 'cru', 'Carub.0008s0636' => 'cru', 'Ca_00338_v3' => 'car', 'Ca_00542_v3' => 'car', 'Ca_01844_v3' => 'car', 'Ca_10611_v3' => 'car', 'Ca_13326_v3' => 'car', 'Ca_17944_v3' => 'car', 'Ca_18546_v3' => 'car', 'Ca_24219_v3' => 'car', 'Ca_29972_v3' => 'car', 'CBR_g3681' => 'cbr', 'CBR_g40021' => 'cbr', 'Cc01_g08140' => 'ccan', 'Cc02_g13410' => 'ccan', 'Cc02_g37480' => 'ccan', 'Cc05_g12030' => 'ccan', 'Cc09_g03370' => 'ccan', 'Cc09_g10300' => 'ccan', 'Cc10_g03530' => 'ccan', 'Cc10_g11380' => 'ccan', 'CDE01G0176' => 'cde', 'CDE02G0675' => 'cde', 'CDE02G0942' => 'cde', 'CDE02G1153' => 'cde', 'CDE02G4177' => 'cde', 'CDE04G2117' => 'cde', 'CDE04G2736' => 'cde', 'CDE08G1161' => 'cde', 'CDE09G1238' => 'cde', 'Cfa000467' => 'cfa', 'Cfa000947' => 'cfa', 'Cfa004969' => 'cfa', 'Cfa005284' => 'cfa', 'Cfa008993' => 'cfa', 'Cfa018187' => 'cfa', 'Cfa018454' => 'cfa', 'Cfa020585' => 'cfa', 'Ciclev10000424m.g' => 'ccl', 'Ciclev10003605m.g' => 'ccl', 'Ciclev10007828m.g' => 'ccl', 'Ciclev10014620m.g' => 'ccl', 'Ciclev10015169m.g' => 'ccl', 'Ciclev10018291m.g' => 'ccl', 'Ciclev10028256m.g' => 'ccl', 'Ciclev10033822m.g' => 'ccl', 'CiPaw.05G060300' => 'cil', 'CiPaw.05G085000' => 'cil', 'CiPaw.06G083700' => 'cil', 'CiPaw.06G120300' => 'cil', 'CiPaw.09G060500' => 'cil', 'CiPaw.09G123800' => 'cil', 'CiPaw.11G169700' => 'cil', 'CiPaw.12G118300' => 'cil', 'CiPaw.15G071000' => 'cil', 'CiPaw.15G081900' => 'cil', 'ClCG01G024610' => 'cla', 'ClCG03G006070' => 'cla', 'ClCG05G019250' => 'cla', 'ClCG09G009500' => 'cla', 'ClCG11G008200' => 'cla', 'ClCG11G018080' => 'cla', 'COL.COLO4_17373' => 'col', 'COL.COLO4_22994' => 'col', 'COL.COLO4_26389' => 'col', 'COL.COLO4_27170' => 'col', 'COL.COLO4_31074' => 'col', 'COL.COLO4_31465' => 'col', 'COL.COLO4_36438' => 'col', 'COL.COLO4_36439' => 'col', 'Cpa.g.c38781' => 'cpa', 'Cpa.g.sc128.12' => 'cpa', 'Cpa.g.sc166.7' => 'cpa', 'Cpa.g.sc166.8' => 'cpa', 'Cpa.g.sc20.111' => 'cpa', 'Cpa.g.sc27.31' => 'cpa', 'Cpa.g.sc64.36' => 'cpa', 'Cpa.g.sc64.37' => 'cpa', 'Cpa.g.sc66.49' => 'cpa', 'Cpa.g.sc80.64' => 'cpa', 'CsaV3_1G012320' => 'csa', 'CsaV3_2G008480' => 'csa', 'CsaV3_2G033450' => 'csa', 'CsaV3_3G044830' => 'csa', 'CsaV3_4G033710' => 'csa', 'CsaV3_6G051730' => 'csa', 'CsaV3_7G025350' => 'csa', 'CSS0001067' => 'camsi', 'CSS0005996' => 'camsi', 'CSS0006590' => 'camsi', 'CSS0009673' => 'camsi', 'CSS0010201' => 'camsi', 'CSS0010549' => 'camsi', 'CSS0011364' => 'camsi', 'CSS0014473' => 'camsi', 'CSS0014961' => 'camsi', 'CSS0020191' => 'camsi', 'CSS0021165' => 'camsi', 'CSS0022306' => 'camsi', 'CSS0030591' => 'camsi', 'CSS0030696' => 'camsi', 'CSS0032653' => 'camsi', 'CSS0037487' => 'camsi', 'CSS0041102' => 'camsi', 'CSS0041261' => 'camsi', 'CSS0046246' => 'camsi', 'CSS0049256' => 'camsi', 'DCAR_004075' => 'dca', 'DCAR_011538' => 'dca', 'DCAR_019553' => 'dca', 'DCAR_020952' => 'dca', 'DCAR_021739' => 'dca', 'DCAR_027407' => 'dca', 'DCAR_027913' => 'dca', 'DCAR_028066' => 'dca', 'Dinv05899' => 'din', 'Dinv07563' => 'din', 'Dinv08010' => 'din', 'Dinv14125' => 'din', 'Dinv20172' => 'din', 'Dinv30743' => 'din', 'Dinv31229' => 'din', 'Dinv34162' => 'din', 'Dinv36028' => 'din', 'Dinv39368' => 'din', 'Dinv40565' => 'din', 'Dinv41706' => 'din', 'Duzib052G0089' => 'dzi', 'Duzib116G0641' => 'dzi', 'Duzib132G0069' => 'dzi', 'Duzib132G1219' => 'dzi', 'Duzib147G0278' => 'dzi', 'Duzib160G0480' => 'dzi', 'Duzib170G0661' => 'dzi', 'Duzib177G0591' => 'dzi', 'Duzib187G1353' => 'dzi', 'Duzib192G0858' => 'dzi', 'Duzib192G0883' => 'dzi', 'Duzib213G0506' => 'dzi', 'Duzib235G0289' => 'dzi', 'Duzib251G0422' => 'dzi', 'ECA232G3898' => 'eca', 'ECA233G5950' => 'eca', 'ECA234G1699' => 'eca', 'ECA234G2421' => 'eca', 'ECA236G0426' => 'eca', 'ECA236G4331' => 'eca', 'ECA248G2573' => 'eca', 'EL10Ac1g00077' => 'bvu', 'EL10Ac1g01746' => 'bvu', 'EL10Ac2g03464' => 'bvu', 'EL10Ac4g08176' => 'bvu', 'EL10Ac7g17521' => 'bvu', 'EL10Ac8g20386' => 'bvu', 'EL10Ac9g21343' => 'bvu', 'EL10Ac9g22688' => 'bvu', 'Eucgr.B03434' => 'egr', 'Eucgr.D00618' => 'egr', 'Eucgr.E02395' => 'egr', 'Eucgr.F01129' => 'egr', 'Eucgr.F02622' => 'egr', 'Eucgr.F04207' => 'egr', 'FAN01G0570' => 'fan', 'FAN03G3351' => 'fan', 'FAN06G3702' => 'fan', 'FAN07G2149' => 'fan', 'FAN10G3758' => 'fan', 'FAN11G1170' => 'fan', 'FAN11G2050' => 'fan', 'FAN11G2724' => 'fan', 'FAN12G1700' => 'fan', 'FAN12G2028' => 'fan', 'FAN15G1160' => 'fan', 'FAN15G3063' => 'fan', 'FAN16G2540' => 'fan', 'FAN16G3077' => 'fan', 'FAN16G3624' => 'fan', 'FAN17G0221' => 'fan', 'FAN20G2492' => 'fan', 'FAN20G2905' => 'fan', 'FAN21G0548' => 'fan', 'FAN21G1300' => 'fan', 'FAN22G0077' => 'fan', 'FAN22G1315' => 'fan', 'FAN24G1280' => 'fan', 'FAN24G1445' => 'fan', 'FAN24G3527' => 'fan', 'FAN25G0464' => 'fan', 'FAN25G2885' => 'fan', 'FAN25G3270' => 'fan', 'FAN27G1101' => 'fan', 'FAN27G2846' => 'fan', 'FAN27G3524' => 'fan', 'FvH4_2g11770' => 'fve', 'FvH4_2g15630' => 'fve', 'FvH4_3g05570' => 'fve', 'FvH4_3g09110' => 'fve', 'FvH4_3g19940' => 'fve', 'FvH4_4g04821' => 'fve', 'FvH4_4g31480' => 'fve', 'FvH4_7g01740' => 'fve', 'Glyma.05G130400' => 'gma', 'Glyma.05G156400' => 'gma', 'Glyma.07G197000' => 'gma', 'Glyma.08G085151' => 'gma', 'Glyma.08G114500' => 'gma', 'Glyma.08G300400' => 'gma', 'Glyma.10G215800' => 'gma', 'Glyma.12G224400' => 'gma', 'Glyma.13G179300' => 'gma', 'Glyma.13G218151' => 'gma', 'Glyma.13G238800' => 'gma', 'Glyma.13G276900' => 'gma', 'Glyma.14G078200' => 'gma', 'Glyma.15G074500' => 'gma', 'Glyma.15G094100' => 'gma', 'Glyma.17G247200' => 'gma', 'Glyma.18G120100' => 'gma', 'Glyma.20G176000' => 'gma', 'Gohir.A01G063600' => 'ghi', 'Gohir.A01G170301' => 'ghi', 'Gohir.A02G060500' => 'ghi', 'Gohir.A05G133850' => 'ghi', 'Gohir.A05G161400' => 'ghi', 'Gohir.A06G012900' => 'ghi', 'Gohir.A06G035901' => 'ghi', 'Gohir.A06G127100' => 'ghi', 'Gohir.A06G210500' => 'ghi', 'Gohir.A08G008650' => 'ghi', 'Gohir.A09G072700' => 'ghi', 'Gohir.A09G088301' => 'ghi', 'Gohir.A10G040600' => 'ghi', 'Gohir.A12G036300' => 'ghi', 'Gohir.A12G143350' => 'ghi', 'Gohir.A12G165500' => 'ghi', 'Gohir.A13G145700' => 'ghi', 'Gohir.D01G050000' => 'ghi', 'Gohir.D01G051366' => 'ghi', 'Gohir.D01G161350' => 'ghi', 'Gohir.D02G065900' => 'ghi', 'Gohir.D05G164200' => 'ghi', 'Gohir.D05G355500' => 'ghi', 'Gohir.D06G010400' => 'ghi', 'Gohir.D06G111250' => 'ghi', 'Gohir.D06G132000' => 'ghi', 'Gohir.D06G210500' => 'ghi', 'Gohir.D07G165675' => 'ghi', 'Gohir.D08G062240' => 'ghi', 'Gohir.D08G086101' => 'ghi', 'Gohir.D08G138060' => 'ghi', 'Gohir.D09G072300' => 'ghi', 'Gohir.D10G041400' => 'ghi', 'Gohir.D11G191020' => 'ghi', 'Gohir.D11G212066' => 'ghi', 'Gohir.D12G036300' => 'ghi', 'Gohir.D12G168600' => 'ghi', 'Gohir.D13G150600' => 'ghi', 'Gorai.001G057300' => 'gra', 'Gorai.002G069900' => 'gra', 'Gorai.002G200000' => 'gra', 'Gorai.003G067600' => 'gra', 'Gorai.005G074800' => 'gra', 'Gorai.006G087300' => 'gra', 'Gorai.008G037500' => 'gra', 'Gorai.008G181400' => 'gra', 'Gorai.009G169400' => 'gra', 'Gorai.009G387900' => 'gra', 'Gorai.010G013300' => 'gra', 'Gorai.010G153800' => 'gra', 'Gorai.010G255800' => 'gra', 'Gorai.011G043700' => 'gra', 'Gorai.011G198900' => 'gra', 'Gorai.013G168400' => 'gra', 'GSVIVG01005212001' => 'vvi', 'GSVIVG01006163001' => 'vvi', 'GSVIVG01009625001' => 'vvi', 'GSVIVG01014338001' => 'vvi', 'GSVIVG01020005001' => 'vvi', 'GSVIVG01021450001' => 'vvi', 'GSVIVG01023975001' => 'vvi', 'GSVIVG01034490001' => 'vvi', 'HanXRQChr04g0112071' => 'han', 'HanXRQChr05g0131151' => 'han', 'HanXRQChr09g0262371' => 'han', 'HanXRQChr09g0268401' => 'han', 'HanXRQChr10g0279241' => 'han', 'HanXRQChr10g0297961' => 'han', 'HanXRQChr11g0326231' => 'han', 'HanXRQChr11g0328471' => 'han', 'HanXRQChr16g0507941' => 'han', 'HanXRQChr17g0560211' => 'han', 'Haze_02108' => 'cav', 'Haze_02428' => 'cav', 'Haze_05593' => 'cav', 'Haze_06448' => 'cav', 'Haze_09427' => 'cav', 'Haze_12022' => 'cav', 'Haze_17612' => 'cav', 'Haze_17928' => 'cav', 'Hma1.2p1_0032F.1_g019250' => 'hma', 'Hma1.2p1_0163F.1_g072690' => 'hma', 'Hma1.2p1_0265F.1_g106710' => 'hma', 'Hma1.2p1_0286F.1_g113970' => 'hma', 'Hma1.2p1_0363F.1_g136640' => 'hma', 'Hma1.2p1_0584F.1_g183470' => 'hma', 'Hma1.2p1_0885F.1_g232570' => 'hma', 'HPP92_006022' => 'vpl', 'HPP92_007320' => 'vpl', 'HPP92_011521' => 'vpl', 'HPP92_019387' => 'vpl', 'HPP92_024038' => 'vpl', 'Hund05891' => 'sun', 'Hund06450' => 'sun', 'Hund12053' => 'sun', 'Hund16800' => 'sun', 'Hund21222' => 'sun', 'Hund22896' => 'sun', 'Hund23746' => 'sun', 'Hund27083' => 'sun', 'Lalb_Chr02g0141831' => 'lal', 'Lalb_Chr02g0141841' => 'lal', 'Lalb_Chr05g0220411' => 'lal', 'Lalb_Chr06g0162081' => 'lal', 'Lalb_Chr09g0327651' => 'lal', 'Lalb_Chr13g0295051' => 'lal', 'Lalb_Chr15g0086801' => 'lal', 'Lalb_Chr16g0383781' => 'lal', 'Lalb_Chr16g0383791' => 'lal', 'Lalb_Chr18g0055441' => 'lal', 'Lalb_Chr18g0059611' => 'lal', 'Lalb_Chr20g0109661' => 'lal', 'Lalb_Chr20g0109831' => 'lal', 'Lalb_Chr20g0121871' => 'lal', 'Lalb_Chr22g0355361' => 'lal', 'Lalb_Chr25g0286371' => 'lal', 'Lj1A1187G43' => 'lonja', 'Lj1A1205T50' => 'lonja', 'Lj1A800G33' => 'lonja', 'Lj1C1187T7' => 'lonja', 'Lj1C843T11' => 'lonja', 'Lj1g0010940' => 'lja', 'Lj2A288T69' => 'lonja', 'Lj3g0024276' => 'lja', 'Lj4A47T76' => 'lonja', 'Lj4g0005805' => 'lja', 'Lj4g0006097' => 'lja', 'Lj4g0008528' => 'lja', 'Lj4g0024907' => 'lja', 'Lj5g0012472' => 'lja', 'Lj5g0018648' => 'lja', 'Lj6C789G1' => 'lonja', 'Lj6g0004000' => 'lja', 'Lj7A292G67' => 'lonja', 'Lj7A292T64' => 'lonja', 'Lj9A400T58' => 'lonja', 'Lsat_1_v5_gn_1_126181' => 'lsa', 'Lsat_1_v5_gn_4_123041' => 'lsa', 'Lsat_1_v5_gn_4_133620' => 'lsa', 'Lsat_1_v5_gn_4_53221' => 'lsa', 'Lsat_1_v5_gn_4_71961' => 'lsa', 'Lsat_1_v5_gn_7_105241' => 'lsa', 'Lsat_1_v5_gn_7_21361' => 'lsa', 'Lsat_1_v5_gn_7_28860' => 'lsa', 'Lsat_1_v5_gn_7_31260' => 'lsa', 'Lsat_1_v5_gn_8_52801' => 'lsa', 'Manes.02G191400' => 'mes', 'Manes.03G110100' => 'mes', 'Manes.04G071100' => 'mes', 'Manes.05G100500' => 'mes', 'Manes.05G164700' => 'mes', 'Manes.15G087000' => 'mes', 'Manes.15G121500' => 'mes', 'Manes.16G028300' => 'mes', 'Manes.17G046100' => 'mes', 'Manes.17G069800' => 'mes', 'Manes.18G100500' => 'mes', 'Mapoly0002s0109' => 'mpo', 'Mapoly0024s0007' => 'mpo', 'Mapoly0089s0032' => 'mpo', 'MBI04_g42241_MAGBIO' => 'mbi', 'MBI05_g11988_MAGBIO' => 'mbi', 'MBI05_g35452_MAGBIO' => 'mbi', 'MBI07_g30179_MAGBIO' => 'mbi', 'MBI07_g35859_MAGBIO' => 'mbi', 'MBI07_g35860_MAGBIO' => 'mbi', 'MBI07_g37166_MAGBIO' => 'mbi', 'MBI08_g18172_MAGBIO' => 'mbi', 'MBI09_g08441_MAGBIO' => 'mbi', 'MBI13_g01676_MAGBIO' => 'mbi', 'MBI14_g42955_MAGBIO' => 'mbi', 'MBI16_g13161_MAGBIO' => 'mbi', 'MBI17_g27204_MAGBIO' => 'mbi', 'MBI19_g21595_MAGBIO' => 'mbi', 'MD00G1148400' => 'mdo', 'MD02G1301200' => 'mdo', 'MD03G1227800' => 'mdo', 'MD05G1041100' => 'mdo', 'MD05G1124800' => 'mdo', 'MD05G1284000' => 'mdo', 'MD05G1338800' => 'mdo', 'MD05G1338900' => 'mdo', 'MD07G1022800' => 'mdo', 'MD10G1047500' => 'mdo', 'MD10G1127500' => 'mdo', 'MD10G1262300' => 'mdo', 'MD10G1293800' => 'mdo', 'MD16G1074300' => 'mdo', 'Medtr1g021670' => 'mtr', 'Medtr1g096320' => 'mtr', 'Medtr2g013690' => 'mtr', 'Medtr2g019450' => 'mtr', 'Medtr2g085170' => 'mtr', 'Medtr4g088785' => 'mtr', 'Medtr8g055930' => 'mtr', 'Medtr8g085850' => 'mtr', 'MELO3C002605.2' => 'cme', 'MELO3C003891.2' => 'cme', 'MELO3C004012.2' => 'cme', 'MELO3C007134.2' => 'cme', 'MELO3C008118.2' => 'cme', 'MELO3C016700.2' => 'cme', 'MELO3C024127.2' => 'cme', 'MELO3C033361.2' => 'cme', 'MELO3C033362.2' => 'cme', 'Migut.C00430' => 'egut', 'Migut.C01246' => 'egut', 'Migut.E00101' => 'egut', 'Migut.H01486' => 'egut', 'Migut.H01939' => 'egut', 'Migut.K00360' => 'egut', 'Migut.M00910' => 'egut', 'Migut.M01139' => 'egut', 'Migut.N02677' => 'egut', 'MSTRG.13252' => 'ama', 'MSTRG.14701' => 'ama', 'MSTRG.1521' => 'ama', 'MSTRG.15884' => 'ama', 'MSTRG.16242' => 'ama', 'MSTRG.22285' => 'ama', 'MSTRG.22444' => 'ama', 'MSTRG.2349' => 'ama', 'MSTRG.26308' => 'ama', 'MSTRG.28296' => 'ama', 'MSTRG.9895' => 'ama', 'Nitab4.5_0000110g0060' => 'nta', 'Nitab4.5_0000420g0130' => 'nta', 'Nitab4.5_0000422g0030' => 'nta', 'Nitab4.5_0000560g0180' => 'nta', 'Nitab4.5_0000703g0100' => 'nta', 'Nitab4.5_0000786g0200' => 'nta', 'Nitab4.5_0001336g0020' => 'nta', 'Nitab4.5_0001796g0030' => 'nta', 'Nitab4.5_0003348g0060' => 'nta', 'Nitab4.5_0003698g0040' => 'nta', 'Nitab4.5_0003942g0090' => 'nta', 'Nitab4.5_0004775g0070' => 'nta', 'Nitab4.5_0004864g0030' => 'nta', 'Nitab4.5_0005615g0020' => 'nta', 'Nitab4.5_0009288g0030' => 'nta', 'Nitab4.5_0009341g0010' => 'nta', 'Nitab4.5_0009535g0010' => 'nta', 'Nn1g03995' => 'nnu', 'Nn1g04100' => 'nnu', 'Nn1g06530' => 'nnu', 'Nn3g16404' => 'nnu', 'Nn3g17212' => 'nnu', 'Nn3g20776' => 'nnu', 'Nn3g21923' => 'nnu', 'Nn5g27737' => 'nnu', 'Nn5g29461' => 'nnu', 'Nn7g38355' => 'nnu', 'Nn8g39873' => 'nnu', 'Oeu000548.2' => 'oeu', 'Oeu004672.1' => 'oeu', 'Oeu015605.2' => 'oeu', 'Oeu016092.1' => 'oeu', 'Oeu017879.3' => 'oeu', 'Oeu024910.1' => 'oeu', 'Oeu028965.1' => 'oeu', 'Oeu031269.1' => 'oeu', 'Oeu031270.1' => 'oeu', 'Oeu032535.1' => 'oeu', 'Oeu034151.1' => 'oeu', 'Oeu034152.1' => 'oeu', 'Oeu034588.2' => 'oeu', 'Oeu050846.1' => 'oeu', 'Oeu050849.2' => 'oeu', 'Oeu051063.2' => 'oeu', 'Oeu052368.1' => 'oeu', 'Oeu052370.1' => 'oeu', 'Os01g0210400' => 'osa', 'Os01g0304300' => 'osa', 'Os01g0749100' => 'osa', 'Os02g0745800' => 'osa', 'Os03g0769050' => 'osa', 'Os05g0531500' => 'osa', 'Os06g0724300' => 'osa', 'Os11g0198100' => 'osa', 'Peaxi162Scf00069g01425' => 'pax', 'Peaxi162Scf00280g00811' => 'pax', 'Peaxi162Scf00310g00615' => 'pax', 'Peaxi162Scf00362g00542' => 'pax', 'Peaxi162Scf00461g00310' => 'pax', 'Peaxi162Scf00530g00118' => 'pax', 'Peaxi162Scf00541g00057' => 'pax', 'Peaxi162Scf00661g00017' => 'pax', 'Peaxi162Scf00926g00027' => 'pax', 'Peaxi162Scf01064g00263' => 'pax', 'Peaxi162Scf01211g00135' => 'pax', 'PGR004G2336' => 'pgr', 'PGR042G0327' => 'pgr', 'PGR042G1957' => 'pgr', 'PGR042G2003' => 'pgr', 'PGR042G3929' => 'pgr', 'PGR083G1137' => 'pgr', 'PGR083G1364' => 'pgr', 'PGSC0003DMG400003381' => 'stu', 'PGSC0003DMG400003417' => 'stu', 'PGSC0003DMG400008981' => 'stu', 'PGSC0003DMG400012417' => 'stu', 'PGSC0003DMG400012823' => 'stu', 'PGSC0003DMG400016885' => 'stu', 'PGSC0003DMG400022812' => 'stu', 'PGSC0003DMG400029726' => 'stu', 'PGSC0003DMG401009243' => 'stu', 'PGSC0003DMG401031505' => 'stu', 'PGSC0003DMG402031505' => 'stu', 'Phvul.001G017600' => 'pvu', 'Phvul.002G193500' => 'pvu', 'Phvul.002G228900' => 'pvu', 'Phvul.002G236800' => 'pvu', 'Phvul.003G049500' => 'pvu', 'Phvul.005G072000' => 'pvu', 'Phvul.006G164800' => 'pvu', 'Phvul.006G185100' => 'pvu', 'Phvul.007G090000' => 'pvu', 'Potri.001G399800' => 'ptr', 'Potri.002G149900' => 'ptr', 'Potri.004G044100' => 'ptr', 'Potri.004G177600' => 'ptr', 'Potri.009G138000' => 'ptr', 'Potri.010G094000' => 'ptr', 'Potri.011G053000' => 'ptr', 'Potri.011G119300' => 'ptr', 'Potri.013G113700' => 'ptr', 'Potri.018G107800' => 'ptr', 'Potri.019G084100' => 'ptr', 'Pp3c14_23720' => 'ppa', 'Pp3c16_6340' => 'ppa', 'Pp3c23_13420' => 'ppa', 'Pp3c24_2740' => 'ppa', 'Pp3c25_860' => 'ppa', 'Pp3c8_21750' => 'ppa', 'Prupe.1G273000' => 'ppe', 'Prupe.1G273700' => 'ppe', 'Prupe.1G274100' => 'ppe', 'Prupe.2G023300' => 'ppe', 'Prupe.4G048000' => 'ppe', 'Prupe.4G080400' => 'ppe', 'Prupe.4G181200' => 'ppe', 'Prupe.8G056900' => 'ppe', 'Prupe.8G168700' => 'ppe', 'Psat1g189080' => 'psa', 'Psat1g204760' => 'psa', 'Psat4g175560' => 'psa', 'Psat4g177720' => 'psa', 'Psat5g244240' => 'psa', 'Psat6g010720' => 'psa', 'Psat6g187200' => 'psa', 'Psat7g072040' => 'psa', 'PSO017G3501' => 'pso', 'PSO063G2148' => 'pso', 'PSO063G5608' => 'pso', 'PSO210G6392' => 'pso', 'PSO541G2319' => 'pso', 'PSO541G2836' => 'pso', 'PSO541G4012' => 'pso', 'PSO541G6253' => 'pso', 'PSO675G0580' => 'pso', 'PSO675G0856' => 'pso', 'PSO675G5635' => 'pso', 'PSO675G9157' => 'pso', 'PSO832G1660' => 'pso', 'PSO832G1969' => 'pso', 'QL02p007186' => 'qlo', 'QL02p033904' => 'qlo', 'QL03p064391' => 'qlo', 'QL05p040593' => 'qlo', 'QL05p058242' => 'qlo', 'QL08p021825' => 'qlo', 'QL11p004981' => 'qlo', 'RcHm_v2.0_Chr1g0318301' => 'rch', 'RcHm_v2.0_Chr4g0418501' => 'rch', 'RcHm_v2.0_Chr4g0439971' => 'rch', 'RcHm_v2.0_Chr5g0008541' => 'rch', 'RcHm_v2.0_Chr5g0014101' => 'rch', 'RcHm_v2.0_Chr5g0014131' => 'rch', 'RcHm_v2.0_Chr5g0033621' => 'rch', 'RcHm_v2.0_Chr6g0272041' => 'rch', 'RcHm_v2.0_Chr6g0278831' => 'rch', 'Rhsim02G0130400' => 'rsi', 'Rhsim02G0171100' => 'rsi', 'Rhsim05G0053000' => 'rsi', 'Rhsim05G0053100' => 'rsi', 'Rhsim06G0096500' => 'rsi', 'Rhsim06G0096600' => 'rsi', 'Rhsim06G0199100' => 'rsi', 'Rhsim12G0062300' => 'rsi', 'Rhsim12G0062800' => 'rsi', 'Sabra02G0118600' => 'sbr', 'Sabra04G0027300' => 'sbr', 'Sabra04G0119500' => 'sbr', 'Sabra08G0112500' => 'sbr', 'Sabra11G0036800' => 'sbr', 'Sabra11G0103800' => 'sbr', 'Sabra13G0096300' => 'sbr', 'Sabra16G0262300' => 'sbr', 'Sabra18G0091700' => 'sbr', 'Sabra19G0095400' => 'sbr', 'SalBow6G3080' => 'sbo', 'SalBow7G1157' => 'sbo', 'SalBow7G2123' => 'sbo', 'SalBow7G2285' => 'sbo', 'SalBow7G3537' => 'sbo', 'SalBow8G2947' => 'sbo', 'SalBow8G4463' => 'sbo', 'SalBow8G5466' => 'sbo', 'Sc01g0001750' => 'sci', 'Sc02g0006640' => 'sci', 'Sc02g0006670' => 'sci', 'Sc04g0008220' => 'sci', 'Sc05g0006190' => 'sci', 'Sc08g0002760' => 'sci', 'Sc17g0006170' => 'sci', 'Sc22g0002050' => 'sci', 'Sc23g0001190' => 'sci', 'Sc24g0000980' => 'sci', 'Sed0006245' => 'sed', 'Sed0007543' => 'sed', 'Sed0009411' => 'sed', 'Sed0010765' => 'sed', 'Sed0012944' => 'sed', 'Sed0014682' => 'sed', 'Sed0016174' => 'sed', 'Sed0016796' => 'sed', 'Sed0020317' => 'sed', 'Sed0021467' => 'sed', 'SEGI_01316' => 'sgi', 'SEGI_03374' => 'sgi', 'SEGI_16265' => 'sgi', 'SEGI_18569' => 'sgi', 'SEGI_20351' => 'sgi', 'SEGI_26395' => 'sgi', 'SEGI_29469' => 'sgi', 'SEGI_34771' => 'sgi', 'SEGI_36769' => 'sgi', 'SEGI_37139' => 'sgi', 'SGA_v2.0_scaffold100G29687' => 'sas', 'SGA_v2.0_scaffold118G32472' => 'sas', 'SGA_v2.0_scaffold14G07051' => 'sas', 'SGA_v2.0_scaffold183G39845' => 'sas', 'SGA_v2.0_scaffold1G00174' => 'sas', 'SGA_v2.0_scaffold22G09714' => 'sas', 'SGA_v2.0_scaffold333G48992' => 'sas', 'SGA_v2.0_scaffold46G17491' => 'sas', 'SGA_v2.0_scaffold49G18294' => 'sas', 'SGA_v2.0_scaffold63G21658' => 'sas', 'SHI01741' => 'shi', 'SHI05771' => 'shi', 'SHI18077' => 'shi', 'SHI20525' => 'shi', 'SHI20527' => 'shi', 'SHI20528' => 'shi', 'SMO172G0185' => 'smo', 'SMO198G0020' => 'smo', 'SMO351G0006' => 'smo', 'SMO356G0118' => 'smo', 'SMO358G0296' => 'smo', 'SMO367G0079' => 'smo', 'SMO367G1277' => 'smo', 'Solyc01g014220.3' => 'sly', 'Solyc01g111770.2' => 'sly', 'Solyc02g078180.3' => 'sly', 'Solyc03g006430.3' => 'sly', 'Solyc03g006456.1' => 'sly', 'Solyc03g079860.2' => 'sly', 'Solyc04g079770.3' => 'sly', 'Solyc05g007430.4' => 'sly', 'Solyc07g063150.3' => 'sly', 'Solyc08g016620.3' => 'sly', 'Solyc09g057590.3' => 'sly', 'Solyc09g057600.1' => 'sly', 'Solyc10g009050.3' => 'sly', 'Solyc11g017420.2' => 'sly', 'Sopen01g053810' => 'spe', 'Sopen02g023040' => 'spe', 'Sopen03g002440' => 'spe', 'Sopen04g033350' => 'spe', 'Sopen05g003310' => 'spe', 'Sopen07g004050' => 'spe', 'Sopen07g031340' => 'spe', 'Sopen08g006990' => 'spe', 'Sopen10g004830' => 'spe', 'Sopen11g009370' => 'spe', 'Sp1g24450' => 'spa', 'Sp1g29670' => 'spa', 'Sp1g39600' => 'spa', 'Sp2g11080' => 'spa', 'Sp2g13970' => 'spa', 'Sp4g16130' => 'spa', 'Sp6g13080' => 'spa', 'Sp7g37270' => 'spa', 'TAR371G0065' => 'tar', 'TAR376G0340' => 'tar', 'TAR376G0435' => 'tar', 'TAR381G0002' => 'tar', 'TAR381G1236' => 'tar', 'TAR624G0055' => 'tar', 'TAR624G0324' => 'tar', 'TAR624G0696' => 'tar', 'TAR624G0906' => 'tar', 'TAR625G0107' => 'tar', 'TAR626G0015' => 'tar', 'TAR626G1356' => 'tar', 'TAR627G0888' => 'tar', 'TAR628G0399' => 'tar', 'TAR628G1327' => 'tar', 'TAR629G2831' => 'tar', 'TAR629G2874' => 'tar', 'TAR633G1432' => 'tar', 'TAR633G2771' => 'tar', 'THA.LOC104803394' => 'tha', 'THA.LOC104805153' => 'tha', 'THA.LOC104806784' => 'tha', 'THA.LOC104810473' => 'tha', 'THA.LOC104813100' => 'tha', 'THA.LOC104814215' => 'tha', 'THA.LOC104815554' => 'tha', 'THA.LOC104820544' => 'tha', 'THA.LOC104824754' => 'tha', 'THA.LOC104827717' => 'tha', 'Thecc.02G031400' => 'tca', 'Thecc.02G055900' => 'tca', 'Thecc.02G350800' => 'tca', 'Thecc.06G150900' => 'tca', 'Thecc.06G186600' => 'tca', 'Thecc.07G089600' => 'tca', 'Thecc.08G020400' => 'tca', 'Thecc.08G182100' => 'tca', 'Thhalv10000873m.g' => 'esa', 'Thhalv10004185m.g' => 'esa', 'Thhalv10006981m.g' => 'esa', 'Thhalv10007204m.g' => 'esa', 'Thhalv10011374m.g' => 'esa', 'Thhalv10013482m.g' => 'esa', 'Thhalv10017801m.g' => 'esa', 'Thhalv10024983m.g' => 'esa', 'TPR.G12072' => 'tpr', 'TPR.G15769' => 'tpr', 'TPR.G16504' => 'tpr', 'TPR.G16506' => 'tpr', 'TPR.G24345' => 'tpr', 'TPR.G26666' => 'tpr', 'TPR.G27320' => 'tpr', 'TPR.G31819' => 'tpr', 'TPR.G38879' => 'tpr', 'TPR.G39015' => 'tpr', 'TPR.G8819' => 'tpr', 'TWI09G0924' => 'twi', 'TWI12G0811' => 'twi', 'TWI12G1294' => 'twi', 'TWI31G0150' => 'twi', 'TWI36G1262' => 'twi', 'TWI38G1287' => 'twi', 'TWI38G1633' => 'twi', 'TWI38G1982' => 'twi', 'TWI39G0116' => 'twi', 'TWI60G1011' => 'twi', 'TWI63G0171' => 'twi', 'TWI73G0839' => 'twi', 'TWI79G1511' => 'twi', 'unitig_0.g915' => 'ugi', 'unitig_0.g916' => 'ugi', 'unitig_21.g20219' => 'ugi', 'unitig_21.g20416' => 'ugi', 'unitig_578.g16132' => 'ugi', 'unitig_578.g16718' => 'ugi', 'unitig_62.g23481' => 'ugi', 'unitig_744.g24535' => 'ugi', 'unitig_749.g13525' => 'ugi', 'vmacro01248' => 'vma', 'vmacro02290' => 'vma', 'vmacro10946' => 'vma', 'vmacro11865' => 'vma', 'vmacro12493' => 'vma', 'vmacro17322' => 'vma', 'vmacro21599' => 'vma', 'vmacro23041' => 'vma', 'VMungo0251G0004' => 'vmu', 'VMungo0251G2639' => 'vmu', 'VMungo0251G2967' => 'vmu', 'VMungo0540G0864' => 'vmu', 'VMungo0540G1569' => 'vmu', 'VMungo0647G0317' => 'vmu', 'VMungo0720G1373' => 'vmu', 'VMungo0720G1508' => 'vmu', 'VMungo1080G0485' => 'vmu', 'VMungo1215G3177' => 'vmu', 'Zm00001eb112600' => 'zma', 'Zm00001eb120220' => 'zma', 'Zm00001eb153240' => 'zma', 'Zm00001eb168880' => 'zma', 'Zm00001eb213920' => 'zma', 'Zm00001eb228280' => 'zma', 'Zm00001eb254580' => 'zma', 'Zm00001eb272180' => 'zma', 'Zm00001eb293190' => 'zma', 'Zm00001eb322930' => 'zma', 'Zm00001eb353360' => 'zma', 'Zm00001eb353390' => 'zma', 'Zm00001eb353430' => 'zma', 'Zm00001eb353440' => 'zma', 'Zm00001eb353780' => 'zma' ) $gf_id = 'HOM05D000499' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000499' ) $data_identifier = 'HOM05D000499' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 29, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 12, 'amhyb' => (int) 8, 'aly' => (int) 12, 'aox' => (int) 9, 'arhy' => (int) 26, 'ath' => (int) 8, 'atr' => (int) 7, 'acertr' => (int) 10, 'cqu' => (int) 15, 'bca' => (int) 29, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 11, 'cansat' => (int) 8, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 9, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 8, 'cpa' => (int) 10, 'csa' => (int) 7, 'camsi' => (int) 20, 'dca' => (int) 8, 'din' => (int) 12, 'dzi' => (int) 14, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 6, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 38, 'gra' => (int) 16, 'vvi' => (int) 8, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 5, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 11, 'lja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 11, 'mpo' => (int) 3, 'mbi' => (int) 14, 'mdo' => (int) 14, 'mtr' => (int) 8, 'cme' => (int) 9, 'egut' => (int) 9, 'ama' => (int) 11, 'nta' => (int) 17, 'nnu' => (int) 11, 'oeu' => (int) 18, 'osa' => (int) 8, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 6, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 9, 'rsi' => (int) 9, 'sbr' => (int) 10, 'sbo' => (int) 8, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 10, 'sas' => (int) 10, 'shi' => (int) 6, 'smo' => (int) 7, 'sly' => (int) 14, 'spe' => (int) 10, 'spa' => (int) 8, 'tar' => (int) 19, 'tha' => (int) 10, 'tca' => (int) 8, 'esa' => (int) 8, 'tpr' => (int) 11, 'twi' => (int) 13, 'ugi' => (int) 9, 'vma' => (int) 8, 'vmu' => (int) 10, 'zma' => (int) 15 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb353780' $species_info = array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ) $local_species = 'psa' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000499', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1066', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p29780' => 'bna', 'A02p33180' => 'bna', 'A03p16470' => 'bna', 'A03p66010' => 'bna', 'A04p25970' => 'bna', 'A06p01270' => 'bna', 'A06p46080' => 'bna', 'A07p11400' => 'bna', 'A08p01840' => 'bna', 'A08p08230' => 'bna', 'A08p25740' => 'bna', 'A09p32070' => 'bna', 'A09p37830' => 'bna', 'A09p42840' => 'bna', 'A09p42850' => 'bna', 'Aa31LG10G2060' => 'aar', 'Aa31LG2G7410' => 'aar', 'Aa31LG6G10200' => 'aar', 'Aa31LG6G16680' => 'aar', 'Aa31LG6G8470' => 'aar', 'Aa31LG9G12730' => 'aar', 'Aa31LG9G13680' => 'aar', 'Aa31LG9G14920' => 'aar', 'Aa31LG9G6650' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4977' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5467' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3254' => 'aag', 'Actinidia02578' => 'ach', 'Actinidia07693' => 'ach', 'Actinidia08413' => 'ach', 'Actinidia08414' => 'ach', 'Actinidia15289' => 'ach', 'Actinidia19871' => 'ach', 'Actinidia21475' => 'ach', 'Actinidia22576' => 'ach', 'Actinidia28327' => 'ach', 'Actinidia32491' => 'ach', 'Actinidia39463' => 'ach', 'Actinidia39571' => 'ach', 'Ah.01g013750' => 'amhyb', 'Ah.01g023210' => 'amhyb', 'Ah.04g164850' => 'amhyb', 'Ah.05g178060' => 'amhyb', 'Ah.07g204270' => 'amhyb', 'Ah.07g208480' => 'amhyb', 'Ah.09g237410' => 'amhyb', 'Ah.14g089460' => 'amhyb', 'AL1G41790' => 'aly', 'AL1G49050' => 'aly', 'AL1G53810' => 'aly', 'AL1G61400' => 'aly', 'AL4G18580' => 'aly', 'AL5G12510' => 'aly', 'AL5G12540' => 'aly', 'AL6G43230' => 'aly', 'AL7G10370' => 'aly', 'AL7G19250' => 'aly', 'AL8G12240' => 'aly', 'AL8G18540' => 'aly', 'Aqoxy1G02409' => 'aox', 'Aqoxy2G03993' => 'aox', 'Aqoxy3G03357' => 'aox', 'Aqoxy4G00785' => 'aox', 'Aqoxy5G02598' => 'aox', 'Aqoxy6G00132' => 'aox', 'Aqoxy7G01776' => 'aox', 'Aqoxy7G02316' => 'aox', 'Aqoxy7G03973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.12AFKW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B8730' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27IQR1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3F75VG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3RE0GA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41TCQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.527VTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FIR39' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5W8UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DA38EV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ63HS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H1I32C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HC27T5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4M8AP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7N3CZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9UVDZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LS1NQA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT1D4B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SKC4TM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCFV76' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF9Q1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQWD9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1ZM88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WE07RT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YCK7VH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJE6Q6' => 'arhy', 'AT1G28240' => 'ath', 'AT1G34550' => 'ath', 'AT1G53040' => 'ath', 'AT2G02910' => 'ath', 'AT4G09630' => 'ath', 'AT4G38500' => 'ath', 'AT5G42660' => 'ath', 'AT5G46220' => 'ath', 'ATR0152G026' => 'atr', 'ATR0564G343' => 'atr', 'ATR0706G151' => 'atr', 'ATR0733G207' => 'atr', 'ATR0751G234' => 'atr', 'ATR0807G048' => 'atr', 'ATR1091G084' => 'atr', 'Atru.chr10.1229' => 'acertr', 'Atru.chr10.1230' => 'acertr', 'Atru.chr10.1874' => 'acertr', 'Atru.chr11.1808' => 'acertr', 'Atru.chr13.1795' => 'acertr', 'Atru.chr13.570' => 'acertr', 'Atru.chr2.2608' => 'acertr', 'Atru.chr2.2609' => 'acertr', 'Atru.chr5.3428' => 'acertr', 'Atru.chr8.1171' => 'acertr', 'AUR62004651' => 'cqu', 'AUR62008675' => 'cqu', 'AUR62010014' => 'cqu', 'AUR62013004' => 'cqu', 'AUR62014825' => 'cqu', 'AUR62015015' => 'cqu', 'AUR62015151' => 'cqu', 'AUR62017020' => 'cqu', 'AUR62019422' => 'cqu', 'AUR62023570' => 'cqu', 'AUR62025571' => 'cqu', 'AUR62029098' => 'cqu', 'AUR62033863' => 'cqu', 'AUR62034296' => 'cqu', 'AUR62040075' => 'cqu', 'BcaB02g07334' => 'bca', 'BcaB02g10575' => 'bca', 'BcaB03g12119' => 'bca', 'BcaB03g12120' => 'bca', 'BcaB03g13945' => 'bca', 'BcaB04g17123' => 'bca', 'BcaB04g17867' => 'bca', 'BcaB04g19839' => 'bca', 'BcaB07g30317' => 'bca', 'BcaB07g32432' => 'bca', 'BcaB07g33362' => 'bca', 'BcaB08g36611' => 'bca', 'BcaC01g00028' => 'bca', 'BcaC01g01356' => 'bca', 'BcaC01g02034' => 'bca', 'BcaC01g06051' => 'bca', 'BcaC03g16839' => 'bca', 'BcaC03g17176' => 'bca', 'BcaC05g26829' => 'bca', 'BcaC06g31490' => 'bca', 'BcaC06g35344' => 'bca', 'BcaC06g36570' => 'bca', 'BcaC07g37537' => 'bca', 'BcaC08g43491' => 'bca', 'BcaC08g43773' => 'bca', 'BcaNung00234' => 'bca', 'BcaNung01982' => 'bca', 'BcaNung03707' => 'bca', 'BcaNung06454' => 'bca', 'BolC2t10762H' => 'bol', 'BolC2t11191H' => 'bol', 'BolC3t14322H' => 'bol', 'BolC3t19747H' => 'bol', 'BolC3t21425H' => 'bol', 'BolC4t27800H' => 'bol', 'BolC5t31423H' => 'bol', 'BolC6t35951H' => 'bol', 'BolC6t36282H' => 'bol', 'BolC7t40678H' => 'bol', 'BolC7t40679H' => 'bol', 'BolC7t42222H' => 'bol', 'BolC7t43492H' => 'bol', 'BolC7t46785H' => 'bol', 'BolC8t47853H' => 'bol', 'BolC9t56805H' => 'bol', 'BraA02t08000Z' => 'bra', 'BraA02t08341Z' => 'bra', 'BraA03t10936Z' => 'bra', 'BraA03t15657Z' => 'bra', 'BraA04t18100Z' => 'bra', 'BraA05t20523Z' => 'bra', 'BraA06t23353Z' => 'bra', 'BraA06t27473Z' => 'bra', 'BraA06t27769Z' => 'bra', 'BraA07t28928Z' => 'bra', 'BraA08t32236Z' => 'bra', 'BraA08t32841Z' => 'bra', 'BraA08t34524Z' => 'bra', 'BraA09t38742Z' => 'bra', 'BraA09t39295Z' => 'bra', 'C02p47180' => 'bna', 'C02p50990' => 'bna', 'C03p19360' => 'bna', 'C03p74950' => 'bna', 'C03p91000' => 'bna', 'C04p63260' => 'bna', 'C05p27050' => 'bna', 'C06p08750' => 'bna', 'C06p11490' => 'bna', 'C07p02820' => 'bna', 'C07p17180' => 'bna', 'C07p29440' => 'bna', 'C07p63730' => 'bna', 'C09p39260' => 'bna', 'CAN.G1164.34' => 'can', 'CAN.G1164.39' => 'can', 'CAN.G1530.3' => 'can', 'CAN.G162.61' => 'can', 'CAN.G176.6' => 'can', 'CAN.G289.49' => 'can', 'CAN.G370.21' => 'can', 'CAN.G370.22' => 'can', 'CAN.G371.117' => 'can', 'CAN.G58.37' => 'can', 'CAN.G588.98' => 'can', 'CANSAT21G2266' => 'cansat', 'CANSAT25G2799' => 'cansat', 'CANSAT35G0862' => 'cansat', 'CANSAT35G1704' => 'cansat', 'CANSAT35G1760' => 'cansat', 'CANSAT56G3971' => 'cansat', 'CANSAT56G4116' => 'cansat', 'CANSAT80G1259' => 'cansat', 'CARHR027730' => 'chi', 'CARHR033880' => 'chi', 'CARHR043270' => 'chi', 'CARHR145330' => 'chi', 'CARHR145340' => 'chi', 'CARHR175570' => 'chi', 'CARHR181570' => 'chi', 'CARHR258470' => 'chi', 'CARHR260490' => 'chi', 'CARHR294220' => 'chi', 'Carub.0001s2668' => 'cru', 'Carub.0001s3257' => 'cru', 'Carub.0001s4220' => 'cru', 'Carub.0005s0179' => 'cru', 'Carub.0006s2807' => 'cru', 'Carub.0007s0039' => 'cru', 'Carub.0008s0169' => 'cru', 'Carub.0008s0636' => 'cru', 'Ca_00338_v3' => 'car', 'Ca_00542_v3' => 'car', 'Ca_01844_v3' => 'car', 'Ca_10611_v3' => 'car', 'Ca_13326_v3' => 'car', 'Ca_17944_v3' => 'car', 'Ca_18546_v3' => 'car', 'Ca_24219_v3' => 'car', 'Ca_29972_v3' => 'car', 'CBR_g3681' => 'cbr', 'CBR_g40021' => 'cbr', 'Cc01_g08140' => 'ccan', 'Cc02_g13410' => 'ccan', 'Cc02_g37480' => 'ccan', 'Cc05_g12030' => 'ccan', 'Cc09_g03370' => 'ccan', 'Cc09_g10300' => 'ccan', 'Cc10_g03530' => 'ccan', 'Cc10_g11380' => 'ccan', 'CDE01G0176' => 'cde', 'CDE02G0675' => 'cde', 'CDE02G0942' => 'cde', 'CDE02G1153' => 'cde', 'CDE02G4177' => 'cde', 'CDE04G2117' => 'cde', 'CDE04G2736' => 'cde', 'CDE08G1161' => 'cde', 'CDE09G1238' => 'cde', 'Cfa000467' => 'cfa', 'Cfa000947' => 'cfa', 'Cfa004969' => 'cfa', 'Cfa005284' => 'cfa', 'Cfa008993' => 'cfa', 'Cfa018187' => 'cfa', 'Cfa018454' => 'cfa', 'Cfa020585' => 'cfa', 'Ciclev10000424m.g' => 'ccl', 'Ciclev10003605m.g' => 'ccl', 'Ciclev10007828m.g' => 'ccl', 'Ciclev10014620m.g' => 'ccl', 'Ciclev10015169m.g' => 'ccl', 'Ciclev10018291m.g' => 'ccl', 'Ciclev10028256m.g' => 'ccl', 'Ciclev10033822m.g' => 'ccl', 'CiPaw.05G060300' => 'cil', 'CiPaw.05G085000' => 'cil', 'CiPaw.06G083700' => 'cil', 'CiPaw.06G120300' => 'cil', 'CiPaw.09G060500' => 'cil', 'CiPaw.09G123800' => 'cil', 'CiPaw.11G169700' => 'cil', 'CiPaw.12G118300' => 'cil', 'CiPaw.15G071000' => 'cil', 'CiPaw.15G081900' => 'cil', 'ClCG01G024610' => 'cla', 'ClCG03G006070' => 'cla', 'ClCG05G019250' => 'cla', 'ClCG09G009500' => 'cla', 'ClCG11G008200' => 'cla', 'ClCG11G018080' => 'cla', 'COL.COLO4_17373' => 'col', 'COL.COLO4_22994' => 'col', 'COL.COLO4_26389' => 'col', 'COL.COLO4_27170' => 'col', 'COL.COLO4_31074' => 'col', 'COL.COLO4_31465' => 'col', 'COL.COLO4_36438' => 'col', 'COL.COLO4_36439' => 'col', 'Cpa.g.c38781' => 'cpa', 'Cpa.g.sc128.12' => 'cpa', 'Cpa.g.sc166.7' => 'cpa', 'Cpa.g.sc166.8' => 'cpa', 'Cpa.g.sc20.111' => 'cpa', 'Cpa.g.sc27.31' => 'cpa', 'Cpa.g.sc64.36' => 'cpa', 'Cpa.g.sc64.37' => 'cpa', 'Cpa.g.sc66.49' => 'cpa', 'Cpa.g.sc80.64' => 'cpa', 'CsaV3_1G012320' => 'csa', 'CsaV3_2G008480' => 'csa', 'CsaV3_2G033450' => 'csa', 'CsaV3_3G044830' => 'csa', 'CsaV3_4G033710' => 'csa', 'CsaV3_6G051730' => 'csa', 'CsaV3_7G025350' => 'csa', 'CSS0001067' => 'camsi', 'CSS0005996' => 'camsi', 'CSS0006590' => 'camsi', 'CSS0009673' => 'camsi', 'CSS0010201' => 'camsi', 'CSS0010549' => 'camsi', 'CSS0011364' => 'camsi', 'CSS0014473' => 'camsi', 'CSS0014961' => 'camsi', 'CSS0020191' => 'camsi', 'CSS0021165' => 'camsi', 'CSS0022306' => 'camsi', 'CSS0030591' => 'camsi', 'CSS0030696' => 'camsi', 'CSS0032653' => 'camsi', 'CSS0037487' => 'camsi', 'CSS0041102' => 'camsi', 'CSS0041261' => 'camsi', 'CSS0046246' => 'camsi', 'CSS0049256' => 'camsi', 'DCAR_004075' => 'dca', 'DCAR_011538' => 'dca', 'DCAR_019553' => 'dca', 'DCAR_020952' => 'dca', 'DCAR_021739' => 'dca', 'DCAR_027407' => 'dca', 'DCAR_027913' => 'dca', 'DCAR_028066' => 'dca', 'Dinv05899' => 'din', 'Dinv07563' => 'din', 'Dinv08010' => 'din', 'Dinv14125' => 'din', 'Dinv20172' => 'din', 'Dinv30743' => 'din', 'Dinv31229' => 'din', 'Dinv34162' => 'din', 'Dinv36028' => 'din', 'Dinv39368' => 'din', 'Dinv40565' => 'din', 'Dinv41706' => 'din', 'Duzib052G0089' => 'dzi', 'Duzib116G0641' => 'dzi', 'Duzib132G0069' => 'dzi', 'Duzib132G1219' => 'dzi', 'Duzib147G0278' => 'dzi', 'Duzib160G0480' => 'dzi', 'Duzib170G0661' => 'dzi', 'Duzib177G0591' => 'dzi', 'Duzib187G1353' => 'dzi', 'Duzib192G0858' => 'dzi', 'Duzib192G0883' => 'dzi', 'Duzib213G0506' => 'dzi', 'Duzib235G0289' => 'dzi', 'Duzib251G0422' => 'dzi', 'ECA232G3898' => 'eca', 'ECA233G5950' => 'eca', 'ECA234G1699' => 'eca', 'ECA234G2421' => 'eca', 'ECA236G0426' => 'eca', 'ECA236G4331' => 'eca', 'ECA248G2573' => 'eca', 'EL10Ac1g00077' => 'bvu', 'EL10Ac1g01746' => 'bvu', 'EL10Ac2g03464' => 'bvu', 'EL10Ac4g08176' => 'bvu', 'EL10Ac7g17521' => 'bvu', 'EL10Ac8g20386' => 'bvu', 'EL10Ac9g21343' => 'bvu', 'EL10Ac9g22688' => 'bvu', 'Eucgr.B03434' => 'egr', 'Eucgr.D00618' => 'egr', 'Eucgr.E02395' => 'egr', 'Eucgr.F01129' => 'egr', 'Eucgr.F02622' => 'egr', 'Eucgr.F04207' => 'egr', 'FAN01G0570' => 'fan', 'FAN03G3351' => 'fan', 'FAN06G3702' => 'fan', 'FAN07G2149' => 'fan', 'FAN10G3758' => 'fan', 'FAN11G1170' => 'fan', 'FAN11G2050' => 'fan', 'FAN11G2724' => 'fan', 'FAN12G1700' => 'fan', 'FAN12G2028' => 'fan', 'FAN15G1160' => 'fan', 'FAN15G3063' => 'fan', 'FAN16G2540' => 'fan', 'FAN16G3077' => 'fan', 'FAN16G3624' => 'fan', 'FAN17G0221' => 'fan', 'FAN20G2492' => 'fan', 'FAN20G2905' => 'fan', 'FAN21G0548' => 'fan', 'FAN21G1300' => 'fan', 'FAN22G0077' => 'fan', 'FAN22G1315' => 'fan', 'FAN24G1280' => 'fan', 'FAN24G1445' => 'fan', 'FAN24G3527' => 'fan', 'FAN25G0464' => 'fan', 'FAN25G2885' => 'fan', 'FAN25G3270' => 'fan', 'FAN27G1101' => 'fan', 'FAN27G2846' => 'fan', 'FAN27G3524' => 'fan', 'FvH4_2g11770' => 'fve', 'FvH4_2g15630' => 'fve', 'FvH4_3g05570' => 'fve', 'FvH4_3g09110' => 'fve', 'FvH4_3g19940' => 'fve', 'FvH4_4g04821' => 'fve', 'FvH4_4g31480' => 'fve', 'FvH4_7g01740' => 'fve', 'Glyma.05G130400' => 'gma', 'Glyma.05G156400' => 'gma', 'Glyma.07G197000' => 'gma', 'Glyma.08G085151' => 'gma', 'Glyma.08G114500' => 'gma', 'Glyma.08G300400' => 'gma', 'Glyma.10G215800' => 'gma', 'Glyma.12G224400' => 'gma', 'Glyma.13G179300' => 'gma', 'Glyma.13G218151' => 'gma', 'Glyma.13G238800' => 'gma', 'Glyma.13G276900' => 'gma', 'Glyma.14G078200' => 'gma', 'Glyma.15G074500' => 'gma', 'Glyma.15G094100' => 'gma', 'Glyma.17G247200' => 'gma', 'Glyma.18G120100' => 'gma', 'Glyma.20G176000' => 'gma', 'Gohir.A01G063600' => 'ghi', 'Gohir.A01G170301' => 'ghi', 'Gohir.A02G060500' => 'ghi', 'Gohir.A05G133850' => 'ghi', 'Gohir.A05G161400' => 'ghi', 'Gohir.A06G012900' => 'ghi', 'Gohir.A06G035901' => 'ghi', 'Gohir.A06G127100' => 'ghi', 'Gohir.A06G210500' => 'ghi', 'Gohir.A08G008650' => 'ghi', 'Gohir.A09G072700' => 'ghi', 'Gohir.A09G088301' => 'ghi', 'Gohir.A10G040600' => 'ghi', 'Gohir.A12G036300' => 'ghi', 'Gohir.A12G143350' => 'ghi', 'Gohir.A12G165500' => 'ghi', 'Gohir.A13G145700' => 'ghi', 'Gohir.D01G050000' => 'ghi', 'Gohir.D01G051366' => 'ghi', 'Gohir.D01G161350' => 'ghi', 'Gohir.D02G065900' => 'ghi', 'Gohir.D05G164200' => 'ghi', 'Gohir.D05G355500' => 'ghi', 'Gohir.D06G010400' => 'ghi', 'Gohir.D06G111250' => 'ghi', 'Gohir.D06G132000' => 'ghi', 'Gohir.D06G210500' => 'ghi', 'Gohir.D07G165675' => 'ghi', 'Gohir.D08G062240' => 'ghi', 'Gohir.D08G086101' => 'ghi', 'Gohir.D08G138060' => 'ghi', 'Gohir.D09G072300' => 'ghi', 'Gohir.D10G041400' => 'ghi', 'Gohir.D11G191020' => 'ghi', 'Gohir.D11G212066' => 'ghi', 'Gohir.D12G036300' => 'ghi', 'Gohir.D12G168600' => 'ghi', 'Gohir.D13G150600' => 'ghi', 'Gorai.001G057300' => 'gra', 'Gorai.002G069900' => 'gra', 'Gorai.002G200000' => 'gra', 'Gorai.003G067600' => 'gra', 'Gorai.005G074800' => 'gra', 'Gorai.006G087300' => 'gra', 'Gorai.008G037500' => 'gra', 'Gorai.008G181400' => 'gra', 'Gorai.009G169400' => 'gra', 'Gorai.009G387900' => 'gra', 'Gorai.010G013300' => 'gra', 'Gorai.010G153800' => 'gra', 'Gorai.010G255800' => 'gra', 'Gorai.011G043700' => 'gra', 'Gorai.011G198900' => 'gra', 'Gorai.013G168400' => 'gra', 'GSVIVG01005212001' => 'vvi', 'GSVIVG01006163001' => 'vvi', 'GSVIVG01009625001' => 'vvi', 'GSVIVG01014338001' => 'vvi', 'GSVIVG01020005001' => 'vvi', 'GSVIVG01021450001' => 'vvi', 'GSVIVG01023975001' => 'vvi', 'GSVIVG01034490001' => 'vvi', 'HanXRQChr04g0112071' => 'han', 'HanXRQChr05g0131151' => 'han', 'HanXRQChr09g0262371' => 'han', 'HanXRQChr09g0268401' => 'han', 'HanXRQChr10g0279241' => 'han', 'HanXRQChr10g0297961' => 'han', 'HanXRQChr11g0326231' => 'han', 'HanXRQChr11g0328471' => 'han', 'HanXRQChr16g0507941' => 'han', 'HanXRQChr17g0560211' => 'han', 'Haze_02108' => 'cav', 'Haze_02428' => 'cav', 'Haze_05593' => 'cav', 'Haze_06448' => 'cav', 'Haze_09427' => 'cav', 'Haze_12022' => 'cav', 'Haze_17612' => 'cav', 'Haze_17928' => 'cav', 'Hma1.2p1_0032F.1_g019250' => 'hma', 'Hma1.2p1_0163F.1_g072690' => 'hma', 'Hma1.2p1_0265F.1_g106710' => 'hma', 'Hma1.2p1_0286F.1_g113970' => 'hma', 'Hma1.2p1_0363F.1_g136640' => 'hma', 'Hma1.2p1_0584F.1_g183470' => 'hma', 'Hma1.2p1_0885F.1_g232570' => 'hma', 'HPP92_006022' => 'vpl', 'HPP92_007320' => 'vpl', 'HPP92_011521' => 'vpl', 'HPP92_019387' => 'vpl', 'HPP92_024038' => 'vpl', 'Hund05891' => 'sun', 'Hund06450' => 'sun', 'Hund12053' => 'sun', 'Hund16800' => 'sun', 'Hund21222' => 'sun', 'Hund22896' => 'sun', 'Hund23746' => 'sun', 'Hund27083' => 'sun', 'Lalb_Chr02g0141831' => 'lal', 'Lalb_Chr02g0141841' => 'lal', 'Lalb_Chr05g0220411' => 'lal', 'Lalb_Chr06g0162081' => 'lal', 'Lalb_Chr09g0327651' => 'lal', 'Lalb_Chr13g0295051' => 'lal', 'Lalb_Chr15g0086801' => 'lal', 'Lalb_Chr16g0383781' => 'lal', 'Lalb_Chr16g0383791' => 'lal', 'Lalb_Chr18g0055441' => 'lal', 'Lalb_Chr18g0059611' => 'lal', 'Lalb_Chr20g0109661' => 'lal', 'Lalb_Chr20g0109831' => 'lal', 'Lalb_Chr20g0121871' => 'lal', 'Lalb_Chr22g0355361' => 'lal', 'Lalb_Chr25g0286371' => 'lal', 'Lj1A1187G43' => 'lonja', 'Lj1A1205T50' => 'lonja', 'Lj1A800G33' => 'lonja', 'Lj1C1187T7' => 'lonja', 'Lj1C843T11' => 'lonja', 'Lj1g0010940' => 'lja', 'Lj2A288T69' => 'lonja', 'Lj3g0024276' => 'lja', 'Lj4A47T76' => 'lonja', 'Lj4g0005805' => 'lja', 'Lj4g0006097' => 'lja', 'Lj4g0008528' => 'lja', 'Lj4g0024907' => 'lja', 'Lj5g0012472' => 'lja', 'Lj5g0018648' => 'lja', 'Lj6C789G1' => 'lonja', 'Lj6g0004000' => 'lja', 'Lj7A292G67' => 'lonja', 'Lj7A292T64' => 'lonja', 'Lj9A400T58' => 'lonja', 'Lsat_1_v5_gn_1_126181' => 'lsa', 'Lsat_1_v5_gn_4_123041' => 'lsa', 'Lsat_1_v5_gn_4_133620' => 'lsa', 'Lsat_1_v5_gn_4_53221' => 'lsa', 'Lsat_1_v5_gn_4_71961' => 'lsa', 'Lsat_1_v5_gn_7_105241' => 'lsa', 'Lsat_1_v5_gn_7_21361' => 'lsa', 'Lsat_1_v5_gn_7_28860' => 'lsa', 'Lsat_1_v5_gn_7_31260' => 'lsa', 'Lsat_1_v5_gn_8_52801' => 'lsa', 'Manes.02G191400' => 'mes', 'Manes.03G110100' => 'mes', 'Manes.04G071100' => 'mes', 'Manes.05G100500' => 'mes', 'Manes.05G164700' => 'mes', 'Manes.15G087000' => 'mes', 'Manes.15G121500' => 'mes', 'Manes.16G028300' => 'mes', 'Manes.17G046100' => 'mes', 'Manes.17G069800' => 'mes', 'Manes.18G100500' => 'mes', 'Mapoly0002s0109' => 'mpo', 'Mapoly0024s0007' => 'mpo', 'Mapoly0089s0032' => 'mpo', 'MBI04_g42241_MAGBIO' => 'mbi', 'MBI05_g11988_MAGBIO' => 'mbi', 'MBI05_g35452_MAGBIO' => 'mbi', 'MBI07_g30179_MAGBIO' => 'mbi', 'MBI07_g35859_MAGBIO' => 'mbi', 'MBI07_g35860_MAGBIO' => 'mbi', 'MBI07_g37166_MAGBIO' => 'mbi', 'MBI08_g18172_MAGBIO' => 'mbi', 'MBI09_g08441_MAGBIO' => 'mbi', 'MBI13_g01676_MAGBIO' => 'mbi', 'MBI14_g42955_MAGBIO' => 'mbi', 'MBI16_g13161_MAGBIO' => 'mbi', 'MBI17_g27204_MAGBIO' => 'mbi', 'MBI19_g21595_MAGBIO' => 'mbi', 'MD00G1148400' => 'mdo', 'MD02G1301200' => 'mdo', 'MD03G1227800' => 'mdo', 'MD05G1041100' => 'mdo', 'MD05G1124800' => 'mdo', 'MD05G1284000' => 'mdo', 'MD05G1338800' => 'mdo', 'MD05G1338900' => 'mdo', 'MD07G1022800' => 'mdo', 'MD10G1047500' => 'mdo', 'MD10G1127500' => 'mdo', 'MD10G1262300' => 'mdo', 'MD10G1293800' => 'mdo', 'MD16G1074300' => 'mdo', 'Medtr1g021670' => 'mtr', 'Medtr1g096320' => 'mtr', 'Medtr2g013690' => 'mtr', 'Medtr2g019450' => 'mtr', 'Medtr2g085170' => 'mtr', 'Medtr4g088785' => 'mtr', 'Medtr8g055930' => 'mtr', 'Medtr8g085850' => 'mtr', 'MELO3C002605.2' => 'cme', 'MELO3C003891.2' => 'cme', 'MELO3C004012.2' => 'cme', 'MELO3C007134.2' => 'cme', 'MELO3C008118.2' => 'cme', 'MELO3C016700.2' => 'cme', 'MELO3C024127.2' => 'cme', 'MELO3C033361.2' => 'cme', 'MELO3C033362.2' => 'cme', 'Migut.C00430' => 'egut', 'Migut.C01246' => 'egut', 'Migut.E00101' => 'egut', 'Migut.H01486' => 'egut', 'Migut.H01939' => 'egut', 'Migut.K00360' => 'egut', 'Migut.M00910' => 'egut', 'Migut.M01139' => 'egut', 'Migut.N02677' => 'egut', 'MSTRG.13252' => 'ama', 'MSTRG.14701' => 'ama', 'MSTRG.1521' => 'ama', 'MSTRG.15884' => 'ama', 'MSTRG.16242' => 'ama', 'MSTRG.22285' => 'ama', 'MSTRG.22444' => 'ama', 'MSTRG.2349' => 'ama', 'MSTRG.26308' => 'ama', 'MSTRG.28296' => 'ama', 'MSTRG.9895' => 'ama', 'Nitab4.5_0000110g0060' => 'nta', 'Nitab4.5_0000420g0130' => 'nta', 'Nitab4.5_0000422g0030' => 'nta', 'Nitab4.5_0000560g0180' => 'nta', 'Nitab4.5_0000703g0100' => 'nta', 'Nitab4.5_0000786g0200' => 'nta', 'Nitab4.5_0001336g0020' => 'nta', 'Nitab4.5_0001796g0030' => 'nta', 'Nitab4.5_0003348g0060' => 'nta', 'Nitab4.5_0003698g0040' => 'nta', 'Nitab4.5_0003942g0090' => 'nta', 'Nitab4.5_0004775g0070' => 'nta', 'Nitab4.5_0004864g0030' => 'nta', 'Nitab4.5_0005615g0020' => 'nta', 'Nitab4.5_0009288g0030' => 'nta', 'Nitab4.5_0009341g0010' => 'nta', 'Nitab4.5_0009535g0010' => 'nta', 'Nn1g03995' => 'nnu', 'Nn1g04100' => 'nnu', 'Nn1g06530' => 'nnu', 'Nn3g16404' => 'nnu', 'Nn3g17212' => 'nnu', 'Nn3g20776' => 'nnu', 'Nn3g21923' => 'nnu', 'Nn5g27737' => 'nnu', 'Nn5g29461' => 'nnu', 'Nn7g38355' => 'nnu', 'Nn8g39873' => 'nnu', 'Oeu000548.2' => 'oeu', 'Oeu004672.1' => 'oeu', 'Oeu015605.2' => 'oeu', 'Oeu016092.1' => 'oeu', 'Oeu017879.3' => 'oeu', 'Oeu024910.1' => 'oeu', 'Oeu028965.1' => 'oeu', 'Oeu031269.1' => 'oeu', 'Oeu031270.1' => 'oeu', 'Oeu032535.1' => 'oeu', 'Oeu034151.1' => 'oeu', 'Oeu034152.1' => 'oeu', 'Oeu034588.2' => 'oeu', 'Oeu050846.1' => 'oeu', 'Oeu050849.2' => 'oeu', 'Oeu051063.2' => 'oeu', 'Oeu052368.1' => 'oeu', 'Oeu052370.1' => 'oeu', 'Os01g0210400' => 'osa', 'Os01g0304300' => 'osa', 'Os01g0749100' => 'osa', 'Os02g0745800' => 'osa', 'Os03g0769050' => 'osa', 'Os05g0531500' => 'osa', 'Os06g0724300' => 'osa', 'Os11g0198100' => 'osa', 'Peaxi162Scf00069g01425' => 'pax', 'Peaxi162Scf00280g00811' => 'pax', 'Peaxi162Scf00310g00615' => 'pax', 'Peaxi162Scf00362g00542' => 'pax', 'Peaxi162Scf00461g00310' => 'pax', 'Peaxi162Scf00530g00118' => 'pax', 'Peaxi162Scf00541g00057' => 'pax', 'Peaxi162Scf00661g00017' => 'pax', 'Peaxi162Scf00926g00027' => 'pax', 'Peaxi162Scf01064g00263' => 'pax', 'Peaxi162Scf01211g00135' => 'pax', 'PGR004G2336' => 'pgr', 'PGR042G0327' => 'pgr', 'PGR042G1957' => 'pgr', 'PGR042G2003' => 'pgr', 'PGR042G3929' => 'pgr', 'PGR083G1137' => 'pgr', 'PGR083G1364' => 'pgr', 'PGSC0003DMG400003381' => 'stu', 'PGSC0003DMG400003417' => 'stu', 'PGSC0003DMG400008981' => 'stu', 'PGSC0003DMG400012417' => 'stu', 'PGSC0003DMG400012823' => 'stu', 'PGSC0003DMG400016885' => 'stu', 'PGSC0003DMG400022812' => 'stu', 'PGSC0003DMG400029726' => 'stu', 'PGSC0003DMG401009243' => 'stu', 'PGSC0003DMG401031505' => 'stu', 'PGSC0003DMG402031505' => 'stu', 'Phvul.001G017600' => 'pvu', 'Phvul.002G193500' => 'pvu', 'Phvul.002G228900' => 'pvu', 'Phvul.002G236800' => 'pvu', 'Phvul.003G049500' => 'pvu', 'Phvul.005G072000' => 'pvu', 'Phvul.006G164800' => 'pvu', 'Phvul.006G185100' => 'pvu', 'Phvul.007G090000' => 'pvu', 'Potri.001G399800' => 'ptr', 'Potri.002G149900' => 'ptr', 'Potri.004G044100' => 'ptr', 'Potri.004G177600' => 'ptr', 'Potri.009G138000' => 'ptr', 'Potri.010G094000' => 'ptr', 'Potri.011G053000' => 'ptr', 'Potri.011G119300' => 'ptr', 'Potri.013G113700' => 'ptr', 'Potri.018G107800' => 'ptr', 'Potri.019G084100' => 'ptr', 'Pp3c14_23720' => 'ppa', 'Pp3c16_6340' => 'ppa', 'Pp3c23_13420' => 'ppa', 'Pp3c24_2740' => 'ppa', 'Pp3c25_860' => 'ppa', 'Pp3c8_21750' => 'ppa', 'Prupe.1G273000' => 'ppe', 'Prupe.1G273700' => 'ppe', 'Prupe.1G274100' => 'ppe', 'Prupe.2G023300' => 'ppe', 'Prupe.4G048000' => 'ppe', 'Prupe.4G080400' => 'ppe', 'Prupe.4G181200' => 'ppe', 'Prupe.8G056900' => 'ppe', 'Prupe.8G168700' => 'ppe', 'Psat1g189080' => 'psa', 'Psat1g204760' => 'psa', 'Psat4g175560' => 'psa', 'Psat4g177720' => 'psa', 'Psat5g244240' => 'psa', 'Psat6g010720' => 'psa', 'Psat6g187200' => 'psa', 'Psat7g072040' => 'psa', 'PSO017G3501' => 'pso', 'PSO063G2148' => 'pso', 'PSO063G5608' => 'pso', 'PSO210G6392' => 'pso', 'PSO541G2319' => 'pso', 'PSO541G2836' => 'pso', 'PSO541G4012' => 'pso', 'PSO541G6253' => 'pso', 'PSO675G0580' => 'pso', 'PSO675G0856' => 'pso', 'PSO675G5635' => 'pso', 'PSO675G9157' => 'pso', 'PSO832G1660' => 'pso', 'PSO832G1969' => 'pso', 'QL02p007186' => 'qlo', 'QL02p033904' => 'qlo', 'QL03p064391' => 'qlo', 'QL05p040593' => 'qlo', 'QL05p058242' => 'qlo', 'QL08p021825' => 'qlo', 'QL11p004981' => 'qlo', 'RcHm_v2.0_Chr1g0318301' => 'rch', 'RcHm_v2.0_Chr4g0418501' => 'rch', 'RcHm_v2.0_Chr4g0439971' => 'rch', 'RcHm_v2.0_Chr5g0008541' => 'rch', 'RcHm_v2.0_Chr5g0014101' => 'rch', 'RcHm_v2.0_Chr5g0014131' => 'rch', 'RcHm_v2.0_Chr5g0033621' => 'rch', 'RcHm_v2.0_Chr6g0272041' => 'rch', 'RcHm_v2.0_Chr6g0278831' => 'rch', 'Rhsim02G0130400' => 'rsi', 'Rhsim02G0171100' => 'rsi', 'Rhsim05G0053000' => 'rsi', 'Rhsim05G0053100' => 'rsi', 'Rhsim06G0096500' => 'rsi', 'Rhsim06G0096600' => 'rsi', 'Rhsim06G0199100' => 'rsi', 'Rhsim12G0062300' => 'rsi', 'Rhsim12G0062800' => 'rsi', 'Sabra02G0118600' => 'sbr', 'Sabra04G0027300' => 'sbr', 'Sabra04G0119500' => 'sbr', 'Sabra08G0112500' => 'sbr', 'Sabra11G0036800' => 'sbr', 'Sabra11G0103800' => 'sbr', 'Sabra13G0096300' => 'sbr', 'Sabra16G0262300' => 'sbr', 'Sabra18G0091700' => 'sbr', 'Sabra19G0095400' => 'sbr', 'SalBow6G3080' => 'sbo', 'SalBow7G1157' => 'sbo', 'SalBow7G2123' => 'sbo', 'SalBow7G2285' => 'sbo', 'SalBow7G3537' => 'sbo', 'SalBow8G2947' => 'sbo', 'SalBow8G4463' => 'sbo', 'SalBow8G5466' => 'sbo', 'Sc01g0001750' => 'sci', 'Sc02g0006640' => 'sci', 'Sc02g0006670' => 'sci', 'Sc04g0008220' => 'sci', 'Sc05g0006190' => 'sci', 'Sc08g0002760' => 'sci', 'Sc17g0006170' => 'sci', 'Sc22g0002050' => 'sci', 'Sc23g0001190' => 'sci', 'Sc24g0000980' => 'sci', 'Sed0006245' => 'sed', 'Sed0007543' => 'sed', 'Sed0009411' => 'sed', 'Sed0010765' => 'sed', 'Sed0012944' => 'sed', 'Sed0014682' => 'sed', 'Sed0016174' => 'sed', 'Sed0016796' => 'sed', 'Sed0020317' => 'sed', 'Sed0021467' => 'sed', 'SEGI_01316' => 'sgi', 'SEGI_03374' => 'sgi', 'SEGI_16265' => 'sgi', 'SEGI_18569' => 'sgi', 'SEGI_20351' => 'sgi', 'SEGI_26395' => 'sgi', 'SEGI_29469' => 'sgi', 'SEGI_34771' => 'sgi', 'SEGI_36769' => 'sgi', 'SEGI_37139' => 'sgi', 'SGA_v2.0_scaffold100G29687' => 'sas', 'SGA_v2.0_scaffold118G32472' => 'sas', 'SGA_v2.0_scaffold14G07051' => 'sas', 'SGA_v2.0_scaffold183G39845' => 'sas', 'SGA_v2.0_scaffold1G00174' => 'sas', 'SGA_v2.0_scaffold22G09714' => 'sas', 'SGA_v2.0_scaffold333G48992' => 'sas', 'SGA_v2.0_scaffold46G17491' => 'sas', 'SGA_v2.0_scaffold49G18294' => 'sas', 'SGA_v2.0_scaffold63G21658' => 'sas', 'SHI01741' => 'shi', 'SHI05771' => 'shi', 'SHI18077' => 'shi', 'SHI20525' => 'shi', 'SHI20527' => 'shi', 'SHI20528' => 'shi', 'SMO172G0185' => 'smo', 'SMO198G0020' => 'smo', 'SMO351G0006' => 'smo', 'SMO356G0118' => 'smo', 'SMO358G0296' => 'smo', 'SMO367G0079' => 'smo', 'SMO367G1277' => 'smo', 'Solyc01g014220.3' => 'sly', 'Solyc01g111770.2' => 'sly', 'Solyc02g078180.3' => 'sly', 'Solyc03g006430.3' => 'sly', 'Solyc03g006456.1' => 'sly', 'Solyc03g079860.2' => 'sly', 'Solyc04g079770.3' => 'sly', 'Solyc05g007430.4' => 'sly', 'Solyc07g063150.3' => 'sly', 'Solyc08g016620.3' => 'sly', 'Solyc09g057590.3' => 'sly', 'Solyc09g057600.1' => 'sly', 'Solyc10g009050.3' => 'sly', 'Solyc11g017420.2' => 'sly', 'Sopen01g053810' => 'spe', 'Sopen02g023040' => 'spe', 'Sopen03g002440' => 'spe', 'Sopen04g033350' => 'spe', 'Sopen05g003310' => 'spe', 'Sopen07g004050' => 'spe', 'Sopen07g031340' => 'spe', 'Sopen08g006990' => 'spe', 'Sopen10g004830' => 'spe', 'Sopen11g009370' => 'spe', 'Sp1g24450' => 'spa', 'Sp1g29670' => 'spa', 'Sp1g39600' => 'spa', 'Sp2g11080' => 'spa', 'Sp2g13970' => 'spa', 'Sp4g16130' => 'spa', 'Sp6g13080' => 'spa', 'Sp7g37270' => 'spa', 'TAR371G0065' => 'tar', 'TAR376G0340' => 'tar', 'TAR376G0435' => 'tar', 'TAR381G0002' => 'tar', 'TAR381G1236' => 'tar', 'TAR624G0055' => 'tar', 'TAR624G0324' => 'tar', 'TAR624G0696' => 'tar', 'TAR624G0906' => 'tar', 'TAR625G0107' => 'tar', 'TAR626G0015' => 'tar', 'TAR626G1356' => 'tar', 'TAR627G0888' => 'tar', 'TAR628G0399' => 'tar', 'TAR628G1327' => 'tar', 'TAR629G2831' => 'tar', 'TAR629G2874' => 'tar', 'TAR633G1432' => 'tar', 'TAR633G2771' => 'tar', 'THA.LOC104803394' => 'tha', 'THA.LOC104805153' => 'tha', 'THA.LOC104806784' => 'tha', 'THA.LOC104810473' => 'tha', 'THA.LOC104813100' => 'tha', 'THA.LOC104814215' => 'tha', 'THA.LOC104815554' => 'tha', 'THA.LOC104820544' => 'tha', 'THA.LOC104824754' => 'tha', 'THA.LOC104827717' => 'tha', 'Thecc.02G031400' => 'tca', 'Thecc.02G055900' => 'tca', 'Thecc.02G350800' => 'tca', 'Thecc.06G150900' => 'tca', 'Thecc.06G186600' => 'tca', 'Thecc.07G089600' => 'tca', 'Thecc.08G020400' => 'tca', 'Thecc.08G182100' => 'tca', 'Thhalv10000873m.g' => 'esa', 'Thhalv10004185m.g' => 'esa', 'Thhalv10006981m.g' => 'esa', 'Thhalv10007204m.g' => 'esa', 'Thhalv10011374m.g' => 'esa', 'Thhalv10013482m.g' => 'esa', 'Thhalv10017801m.g' => 'esa', 'Thhalv10024983m.g' => 'esa', 'TPR.G12072' => 'tpr', 'TPR.G15769' => 'tpr', 'TPR.G16504' => 'tpr', 'TPR.G16506' => 'tpr', 'TPR.G24345' => 'tpr', 'TPR.G26666' => 'tpr', 'TPR.G27320' => 'tpr', 'TPR.G31819' => 'tpr', 'TPR.G38879' => 'tpr', 'TPR.G39015' => 'tpr', 'TPR.G8819' => 'tpr', 'TWI09G0924' => 'twi', 'TWI12G0811' => 'twi', 'TWI12G1294' => 'twi', 'TWI31G0150' => 'twi', 'TWI36G1262' => 'twi', 'TWI38G1287' => 'twi', 'TWI38G1633' => 'twi', 'TWI38G1982' => 'twi', 'TWI39G0116' => 'twi', 'TWI60G1011' => 'twi', 'TWI63G0171' => 'twi', 'TWI73G0839' => 'twi', 'TWI79G1511' => 'twi', 'unitig_0.g915' => 'ugi', 'unitig_0.g916' => 'ugi', 'unitig_21.g20219' => 'ugi', 'unitig_21.g20416' => 'ugi', 'unitig_578.g16132' => 'ugi', 'unitig_578.g16718' => 'ugi', 'unitig_62.g23481' => 'ugi', 'unitig_744.g24535' => 'ugi', 'unitig_749.g13525' => 'ugi', 'vmacro01248' => 'vma', 'vmacro02290' => 'vma', 'vmacro10946' => 'vma', 'vmacro11865' => 'vma', 'vmacro12493' => 'vma', 'vmacro17322' => 'vma', 'vmacro21599' => 'vma', 'vmacro23041' => 'vma', 'VMungo0251G0004' => 'vmu', 'VMungo0251G2639' => 'vmu', 'VMungo0251G2967' => 'vmu', 'VMungo0540G0864' => 'vmu', 'VMungo0540G1569' => 'vmu', 'VMungo0647G0317' => 'vmu', 'VMungo0720G1373' => 'vmu', 'VMungo0720G1508' => 'vmu', 'VMungo1080G0485' => 'vmu', 'VMungo1215G3177' => 'vmu', 'Zm00001eb112600' => 'zma', 'Zm00001eb120220' => 'zma', 'Zm00001eb153240' => 'zma', 'Zm00001eb168880' => 'zma', 'Zm00001eb213920' => 'zma', 'Zm00001eb228280' => 'zma', 'Zm00001eb254580' => 'zma', 'Zm00001eb272180' => 'zma', 'Zm00001eb293190' => 'zma', 'Zm00001eb322930' => 'zma', 'Zm00001eb353360' => 'zma', 'Zm00001eb353390' => 'zma', 'Zm00001eb353430' => 'zma', 'Zm00001eb353440' => 'zma', 'Zm00001eb353780' => 'zma' ), 'gf_id' => 'HOM05D000499', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000499' ), 'data_identifier' => 'HOM05D000499', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000499', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1066', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p29780' => 'bna', 'A02p33180' => 'bna', 'A03p16470' => 'bna', 'A03p66010' => 'bna', 'A04p25970' => 'bna', 'A06p01270' => 'bna', 'A06p46080' => 'bna', 'A07p11400' => 'bna', 'A08p01840' => 'bna', 'A08p08230' => 'bna', 'A08p25740' => 'bna', 'A09p32070' => 'bna', 'A09p37830' => 'bna', 'A09p42840' => 'bna', 'A09p42850' => 'bna', 'Aa31LG10G2060' => 'aar', 'Aa31LG2G7410' => 'aar', 'Aa31LG6G10200' => 'aar', 'Aa31LG6G16680' => 'aar', 'Aa31LG6G8470' => 'aar', 'Aa31LG9G12730' => 'aar', 'Aa31LG9G13680' => 'aar', 'Aa31LG9G14920' => 'aar', 'Aa31LG9G6650' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4977' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5467' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3254' => 'aag', 'Actinidia02578' => 'ach', 'Actinidia07693' => 'ach', 'Actinidia08413' => 'ach', 'Actinidia08414' => 'ach', 'Actinidia15289' => 'ach', 'Actinidia19871' => 'ach', 'Actinidia21475' => 'ach', 'Actinidia22576' => 'ach', 'Actinidia28327' => 'ach', 'Actinidia32491' => 'ach', 'Actinidia39463' => 'ach', 'Actinidia39571' => 'ach', 'Ah.01g013750' => 'amhyb', 'Ah.01g023210' => 'amhyb', 'Ah.04g164850' => 'amhyb', 'Ah.05g178060' => 'amhyb', 'Ah.07g204270' => 'amhyb', 'Ah.07g208480' => 'amhyb', 'Ah.09g237410' => 'amhyb', 'Ah.14g089460' => 'amhyb', 'AL1G41790' => 'aly', 'AL1G49050' => 'aly', 'AL1G53810' => 'aly', 'AL1G61400' => 'aly', 'AL4G18580' => 'aly', 'AL5G12510' => 'aly', 'AL5G12540' => 'aly', 'AL6G43230' => 'aly', 'AL7G10370' => 'aly', 'AL7G19250' => 'aly', 'AL8G12240' => 'aly', 'AL8G18540' => 'aly', 'Aqoxy1G02409' => 'aox', 'Aqoxy2G03993' => 'aox', 'Aqoxy3G03357' => 'aox', 'Aqoxy4G00785' => 'aox', 'Aqoxy5G02598' => 'aox', 'Aqoxy6G00132' => 'aox', 'Aqoxy7G01776' => 'aox', 'Aqoxy7G02316' => 'aox', 'Aqoxy7G03973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.12AFKW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B8730' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27IQR1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3F75VG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3RE0GA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41TCQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.527VTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FIR39' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5W8UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DA38EV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ63HS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H1I32C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HC27T5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4M8AP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7N3CZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9UVDZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LS1NQA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT1D4B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SKC4TM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCFV76' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF9Q1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQWD9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1ZM88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WE07RT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YCK7VH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJE6Q6' => 'arhy', 'AT1G28240' => 'ath', 'AT1G34550' => 'ath', 'AT1G53040' => 'ath', 'AT2G02910' => 'ath', 'AT4G09630' => 'ath', 'AT4G38500' => 'ath', 'AT5G42660' => 'ath', 'AT5G46220' => 'ath', 'ATR0152G026' => 'atr', 'ATR0564G343' => 'atr', 'ATR0706G151' => 'atr', 'ATR0733G207' => 'atr', 'ATR0751G234' => 'atr', 'ATR0807G048' => 'atr', 'ATR1091G084' => 'atr', 'Atru.chr10.1229' => 'acertr', 'Atru.chr10.1230' => 'acertr', 'Atru.chr10.1874' => 'acertr', 'Atru.chr11.1808' => 'acertr', 'Atru.chr13.1795' => 'acertr', 'Atru.chr13.570' => 'acertr', 'Atru.chr2.2608' => 'acertr', 'Atru.chr2.2609' => 'acertr', 'Atru.chr5.3428' => 'acertr', 'Atru.chr8.1171' => 'acertr', 'AUR62004651' => 'cqu', 'AUR62008675' => 'cqu', 'AUR62010014' => 'cqu', 'AUR62013004' => 'cqu', 'AUR62014825' => 'cqu', 'AUR62015015' => 'cqu', 'AUR62015151' => 'cqu', 'AUR62017020' => 'cqu', 'AUR62019422' => 'cqu', 'AUR62023570' => 'cqu', 'AUR62025571' => 'cqu', 'AUR62029098' => 'cqu', 'AUR62033863' => 'cqu', 'AUR62034296' => 'cqu', 'AUR62040075' => 'cqu', 'BcaB02g07334' => 'bca', 'BcaB02g10575' => 'bca', 'BcaB03g12119' => 'bca', 'BcaB03g12120' => 'bca', 'BcaB03g13945' => 'bca', 'BcaB04g17123' => 'bca', 'BcaB04g17867' => 'bca', 'BcaB04g19839' => 'bca', 'BcaB07g30317' => 'bca', 'BcaB07g32432' => 'bca', 'BcaB07g33362' => 'bca', 'BcaB08g36611' => 'bca', 'BcaC01g00028' => 'bca', 'BcaC01g01356' => 'bca', 'BcaC01g02034' => 'bca', 'BcaC01g06051' => 'bca', 'BcaC03g16839' => 'bca', 'BcaC03g17176' => 'bca', 'BcaC05g26829' => 'bca', 'BcaC06g31490' => 'bca', 'BcaC06g35344' => 'bca', 'BcaC06g36570' => 'bca', 'BcaC07g37537' => 'bca', 'BcaC08g43491' => 'bca', 'BcaC08g43773' => 'bca', 'BcaNung00234' => 'bca', 'BcaNung01982' => 'bca', 'BcaNung03707' => 'bca', 'BcaNung06454' => 'bca', 'BolC2t10762H' => 'bol', 'BolC2t11191H' => 'bol', 'BolC3t14322H' => 'bol', 'BolC3t19747H' => 'bol', 'BolC3t21425H' => 'bol', 'BolC4t27800H' => 'bol', 'BolC5t31423H' => 'bol', 'BolC6t35951H' => 'bol', 'BolC6t36282H' => 'bol', 'BolC7t40678H' => 'bol', 'BolC7t40679H' => 'bol', 'BolC7t42222H' => 'bol', 'BolC7t43492H' => 'bol', 'BolC7t46785H' => 'bol', 'BolC8t47853H' => 'bol', 'BolC9t56805H' => 'bol', 'BraA02t08000Z' => 'bra', 'BraA02t08341Z' => 'bra', 'BraA03t10936Z' => 'bra', 'BraA03t15657Z' => 'bra', 'BraA04t18100Z' => 'bra', 'BraA05t20523Z' => 'bra', 'BraA06t23353Z' => 'bra', 'BraA06t27473Z' => 'bra', 'BraA06t27769Z' => 'bra', 'BraA07t28928Z' => 'bra', 'BraA08t32236Z' => 'bra', 'BraA08t32841Z' => 'bra', 'BraA08t34524Z' => 'bra', 'BraA09t38742Z' => 'bra', 'BraA09t39295Z' => 'bra', 'C02p47180' => 'bna', 'C02p50990' => 'bna', 'C03p19360' => 'bna', 'C03p74950' => 'bna', 'C03p91000' => 'bna', 'C04p63260' => 'bna', 'C05p27050' => 'bna', 'C06p08750' => 'bna', 'C06p11490' => 'bna', 'C07p02820' => 'bna', 'C07p17180' => 'bna', 'C07p29440' => 'bna', 'C07p63730' => 'bna', 'C09p39260' => 'bna', 'CAN.G1164.34' => 'can', 'CAN.G1164.39' => 'can', 'CAN.G1530.3' => 'can', 'CAN.G162.61' => 'can', 'CAN.G176.6' => 'can', 'CAN.G289.49' => 'can', 'CAN.G370.21' => 'can', 'CAN.G370.22' => 'can', 'CAN.G371.117' => 'can', 'CAN.G58.37' => 'can', 'CAN.G588.98' => 'can', 'CANSAT21G2266' => 'cansat', 'CANSAT25G2799' => 'cansat', 'CANSAT35G0862' => 'cansat', 'CANSAT35G1704' => 'cansat', 'CANSAT35G1760' => 'cansat', 'CANSAT56G3971' => 'cansat', 'CANSAT56G4116' => 'cansat', 'CANSAT80G1259' => 'cansat', 'CARHR027730' => 'chi', 'CARHR033880' => 'chi', 'CARHR043270' => 'chi', 'CARHR145330' => 'chi', 'CARHR145340' => 'chi', 'CARHR175570' => 'chi', 'CARHR181570' => 'chi', 'CARHR258470' => 'chi', 'CARHR260490' => 'chi', 'CARHR294220' => 'chi', 'Carub.0001s2668' => 'cru', 'Carub.0001s3257' => 'cru', 'Carub.0001s4220' => 'cru', 'Carub.0005s0179' => 'cru', 'Carub.0006s2807' => 'cru', 'Carub.0007s0039' => 'cru', 'Carub.0008s0169' => 'cru', 'Carub.0008s0636' => 'cru', 'Ca_00338_v3' => 'car', 'Ca_00542_v3' => 'car', 'Ca_01844_v3' => 'car', 'Ca_10611_v3' => 'car', 'Ca_13326_v3' => 'car', 'Ca_17944_v3' => 'car', 'Ca_18546_v3' => 'car', 'Ca_24219_v3' => 'car', 'Ca_29972_v3' => 'car', 'CBR_g3681' => 'cbr', 'CBR_g40021' => 'cbr', 'Cc01_g08140' => 'ccan', 'Cc02_g13410' => 'ccan', 'Cc02_g37480' => 'ccan', 'Cc05_g12030' => 'ccan', 'Cc09_g03370' => 'ccan', 'Cc09_g10300' => 'ccan', 'Cc10_g03530' => 'ccan', 'Cc10_g11380' => 'ccan', 'CDE01G0176' => 'cde', 'CDE02G0675' => 'cde', 'CDE02G0942' => 'cde', 'CDE02G1153' => 'cde', 'CDE02G4177' => 'cde', 'CDE04G2117' => 'cde', 'CDE04G2736' => 'cde', 'CDE08G1161' => 'cde', 'CDE09G1238' => 'cde', 'Cfa000467' => 'cfa', 'Cfa000947' => 'cfa', 'Cfa004969' => 'cfa', 'Cfa005284' => 'cfa', 'Cfa008993' => 'cfa', 'Cfa018187' => 'cfa', 'Cfa018454' => 'cfa', 'Cfa020585' => 'cfa', 'Ciclev10000424m.g' => 'ccl', 'Ciclev10003605m.g' => 'ccl', 'Ciclev10007828m.g' => 'ccl', 'Ciclev10014620m.g' => 'ccl', 'Ciclev10015169m.g' => 'ccl', 'Ciclev10018291m.g' => 'ccl', 'Ciclev10028256m.g' => 'ccl', 'Ciclev10033822m.g' => 'ccl', 'CiPaw.05G060300' => 'cil', 'CiPaw.05G085000' => 'cil', 'CiPaw.06G083700' => 'cil', 'CiPaw.06G120300' => 'cil', 'CiPaw.09G060500' => 'cil', 'CiPaw.09G123800' => 'cil', 'CiPaw.11G169700' => 'cil', 'CiPaw.12G118300' => 'cil', 'CiPaw.15G071000' => 'cil', 'CiPaw.15G081900' => 'cil', 'ClCG01G024610' => 'cla', 'ClCG03G006070' => 'cla', 'ClCG05G019250' => 'cla', 'ClCG09G009500' => 'cla', 'ClCG11G008200' => 'cla', 'ClCG11G018080' => 'cla', 'COL.COLO4_17373' => 'col', 'COL.COLO4_22994' => 'col', 'COL.COLO4_26389' => 'col', 'COL.COLO4_27170' => 'col', 'COL.COLO4_31074' => 'col', 'COL.COLO4_31465' => 'col', 'COL.COLO4_36438' => 'col', 'COL.COLO4_36439' => 'col', 'Cpa.g.c38781' => 'cpa', 'Cpa.g.sc128.12' => 'cpa', 'Cpa.g.sc166.7' => 'cpa', 'Cpa.g.sc166.8' => 'cpa', 'Cpa.g.sc20.111' => 'cpa', 'Cpa.g.sc27.31' => 'cpa', 'Cpa.g.sc64.36' => 'cpa', 'Cpa.g.sc64.37' => 'cpa', 'Cpa.g.sc66.49' => 'cpa', 'Cpa.g.sc80.64' => 'cpa', 'CsaV3_1G012320' => 'csa', 'CsaV3_2G008480' => 'csa', 'CsaV3_2G033450' => 'csa', 'CsaV3_3G044830' => 'csa', 'CsaV3_4G033710' => 'csa', 'CsaV3_6G051730' => 'csa', 'CsaV3_7G025350' => 'csa', 'CSS0001067' => 'camsi', 'CSS0005996' => 'camsi', 'CSS0006590' => 'camsi', 'CSS0009673' => 'camsi', 'CSS0010201' => 'camsi', 'CSS0010549' => 'camsi', 'CSS0011364' => 'camsi', 'CSS0014473' => 'camsi', 'CSS0014961' => 'camsi', 'CSS0020191' => 'camsi', 'CSS0021165' => 'camsi', 'CSS0022306' => 'camsi', 'CSS0030591' => 'camsi', 'CSS0030696' => 'camsi', 'CSS0032653' => 'camsi', 'CSS0037487' => 'camsi', 'CSS0041102' => 'camsi', 'CSS0041261' => 'camsi', 'CSS0046246' => 'camsi', 'CSS0049256' => 'camsi', 'DCAR_004075' => 'dca', 'DCAR_011538' => 'dca', 'DCAR_019553' => 'dca', 'DCAR_020952' => 'dca', 'DCAR_021739' => 'dca', 'DCAR_027407' => 'dca', 'DCAR_027913' => 'dca', 'DCAR_028066' => 'dca', 'Dinv05899' => 'din', 'Dinv07563' => 'din', 'Dinv08010' => 'din', 'Dinv14125' => 'din', 'Dinv20172' => 'din', 'Dinv30743' => 'din', 'Dinv31229' => 'din', 'Dinv34162' => 'din', 'Dinv36028' => 'din', 'Dinv39368' => 'din', 'Dinv40565' => 'din', 'Dinv41706' => 'din', 'Duzib052G0089' => 'dzi', 'Duzib116G0641' => 'dzi', 'Duzib132G0069' => 'dzi', 'Duzib132G1219' => 'dzi', 'Duzib147G0278' => 'dzi', 'Duzib160G0480' => 'dzi', 'Duzib170G0661' => 'dzi', 'Duzib177G0591' => 'dzi', 'Duzib187G1353' => 'dzi', 'Duzib192G0858' => 'dzi', 'Duzib192G0883' => 'dzi', 'Duzib213G0506' => 'dzi', 'Duzib235G0289' => 'dzi', 'Duzib251G0422' => 'dzi', 'ECA232G3898' => 'eca', 'ECA233G5950' => 'eca', 'ECA234G1699' => 'eca', 'ECA234G2421' => 'eca', 'ECA236G0426' => 'eca', 'ECA236G4331' => 'eca', 'ECA248G2573' => 'eca', 'EL10Ac1g00077' => 'bvu', 'EL10Ac1g01746' => 'bvu', 'EL10Ac2g03464' => 'bvu', 'EL10Ac4g08176' => 'bvu', 'EL10Ac7g17521' => 'bvu', 'EL10Ac8g20386' => 'bvu', 'EL10Ac9g21343' => 'bvu', 'EL10Ac9g22688' => 'bvu', 'Eucgr.B03434' => 'egr', 'Eucgr.D00618' => 'egr', 'Eucgr.E02395' => 'egr', 'Eucgr.F01129' => 'egr', 'Eucgr.F02622' => 'egr', 'Eucgr.F04207' => 'egr', 'FAN01G0570' => 'fan', 'FAN03G3351' => 'fan', 'FAN06G3702' => 'fan', 'FAN07G2149' => 'fan', 'FAN10G3758' => 'fan', 'FAN11G1170' => 'fan', 'FAN11G2050' => 'fan', 'FAN11G2724' => 'fan', 'FAN12G1700' => 'fan', 'FAN12G2028' => 'fan', 'FAN15G1160' => 'fan', 'FAN15G3063' => 'fan', 'FAN16G2540' => 'fan', 'FAN16G3077' => 'fan', 'FAN16G3624' => 'fan', 'FAN17G0221' => 'fan', 'FAN20G2492' => 'fan', 'FAN20G2905' => 'fan', 'FAN21G0548' => 'fan', 'FAN21G1300' => 'fan', 'FAN22G0077' => 'fan', 'FAN22G1315' => 'fan', 'FAN24G1280' => 'fan', 'FAN24G1445' => 'fan', 'FAN24G3527' => 'fan', 'FAN25G0464' => 'fan', 'FAN25G2885' => 'fan', 'FAN25G3270' => 'fan', 'FAN27G1101' => 'fan', 'FAN27G2846' => 'fan', 'FAN27G3524' => 'fan', 'FvH4_2g11770' => 'fve', 'FvH4_2g15630' => 'fve', 'FvH4_3g05570' => 'fve', 'FvH4_3g09110' => 'fve', 'FvH4_3g19940' => 'fve', 'FvH4_4g04821' => 'fve', 'FvH4_4g31480' => 'fve', 'FvH4_7g01740' => 'fve', 'Glyma.05G130400' => 'gma', 'Glyma.05G156400' => 'gma', 'Glyma.07G197000' => 'gma', 'Glyma.08G085151' => 'gma', 'Glyma.08G114500' => 'gma', 'Glyma.08G300400' => 'gma', 'Glyma.10G215800' => 'gma', 'Glyma.12G224400' => 'gma', 'Glyma.13G179300' => 'gma', 'Glyma.13G218151' => 'gma', 'Glyma.13G238800' => 'gma', 'Glyma.13G276900' => 'gma', 'Glyma.14G078200' => 'gma', 'Glyma.15G074500' => 'gma', 'Glyma.15G094100' => 'gma', 'Glyma.17G247200' => 'gma', 'Glyma.18G120100' => 'gma', 'Glyma.20G176000' => 'gma', 'Gohir.A01G063600' => 'ghi', 'Gohir.A01G170301' => 'ghi', 'Gohir.A02G060500' => 'ghi', 'Gohir.A05G133850' => 'ghi', 'Gohir.A05G161400' => 'ghi', 'Gohir.A06G012900' => 'ghi', 'Gohir.A06G035901' => 'ghi', 'Gohir.A06G127100' => 'ghi', 'Gohir.A06G210500' => 'ghi', 'Gohir.A08G008650' => 'ghi', 'Gohir.A09G072700' => 'ghi', 'Gohir.A09G088301' => 'ghi', 'Gohir.A10G040600' => 'ghi', 'Gohir.A12G036300' => 'ghi', 'Gohir.A12G143350' => 'ghi', 'Gohir.A12G165500' => 'ghi', 'Gohir.A13G145700' => 'ghi', 'Gohir.D01G050000' => 'ghi', 'Gohir.D01G051366' => 'ghi', 'Gohir.D01G161350' => 'ghi', 'Gohir.D02G065900' => 'ghi', 'Gohir.D05G164200' => 'ghi', 'Gohir.D05G355500' => 'ghi', 'Gohir.D06G010400' => 'ghi', 'Gohir.D06G111250' => 'ghi', 'Gohir.D06G132000' => 'ghi', 'Gohir.D06G210500' => 'ghi', 'Gohir.D07G165675' => 'ghi', 'Gohir.D08G062240' => 'ghi', 'Gohir.D08G086101' => 'ghi', 'Gohir.D08G138060' => 'ghi', 'Gohir.D09G072300' => 'ghi', 'Gohir.D10G041400' => 'ghi', 'Gohir.D11G191020' => 'ghi', 'Gohir.D11G212066' => 'ghi', 'Gohir.D12G036300' => 'ghi', 'Gohir.D12G168600' => 'ghi', 'Gohir.D13G150600' => 'ghi', 'Gorai.001G057300' => 'gra', 'Gorai.002G069900' => 'gra', 'Gorai.002G200000' => 'gra', 'Gorai.003G067600' => 'gra', 'Gorai.005G074800' => 'gra', 'Gorai.006G087300' => 'gra', 'Gorai.008G037500' => 'gra', 'Gorai.008G181400' => 'gra', 'Gorai.009G169400' => 'gra', 'Gorai.009G387900' => 'gra', 'Gorai.010G013300' => 'gra', 'Gorai.010G153800' => 'gra', 'Gorai.010G255800' => 'gra', 'Gorai.011G043700' => 'gra', 'Gorai.011G198900' => 'gra', 'Gorai.013G168400' => 'gra', 'GSVIVG01005212001' => 'vvi', 'GSVIVG01006163001' => 'vvi', 'GSVIVG01009625001' => 'vvi', 'GSVIVG01014338001' => 'vvi', 'GSVIVG01020005001' => 'vvi', 'GSVIVG01021450001' => 'vvi', 'GSVIVG01023975001' => 'vvi', 'GSVIVG01034490001' => 'vvi', 'HanXRQChr04g0112071' => 'han', 'HanXRQChr05g0131151' => 'han', 'HanXRQChr09g0262371' => 'han', 'HanXRQChr09g0268401' => 'han', 'HanXRQChr10g0279241' => 'han', 'HanXRQChr10g0297961' => 'han', 'HanXRQChr11g0326231' => 'han', 'HanXRQChr11g0328471' => 'han', 'HanXRQChr16g0507941' => 'han', 'HanXRQChr17g0560211' => 'han', 'Haze_02108' => 'cav', 'Haze_02428' => 'cav', 'Haze_05593' => 'cav', 'Haze_06448' => 'cav', 'Haze_09427' => 'cav', 'Haze_12022' => 'cav', 'Haze_17612' => 'cav', 'Haze_17928' => 'cav', 'Hma1.2p1_0032F.1_g019250' => 'hma', 'Hma1.2p1_0163F.1_g072690' => 'hma', 'Hma1.2p1_0265F.1_g106710' => 'hma', 'Hma1.2p1_0286F.1_g113970' => 'hma', 'Hma1.2p1_0363F.1_g136640' => 'hma', 'Hma1.2p1_0584F.1_g183470' => 'hma', 'Hma1.2p1_0885F.1_g232570' => 'hma', 'HPP92_006022' => 'vpl', 'HPP92_007320' => 'vpl', 'HPP92_011521' => 'vpl', 'HPP92_019387' => 'vpl', 'HPP92_024038' => 'vpl', 'Hund05891' => 'sun', 'Hund06450' => 'sun', 'Hund12053' => 'sun', 'Hund16800' => 'sun', 'Hund21222' => 'sun', 'Hund22896' => 'sun', 'Hund23746' => 'sun', 'Hund27083' => 'sun', 'Lalb_Chr02g0141831' => 'lal', 'Lalb_Chr02g0141841' => 'lal', 'Lalb_Chr05g0220411' => 'lal', 'Lalb_Chr06g0162081' => 'lal', 'Lalb_Chr09g0327651' => 'lal', 'Lalb_Chr13g0295051' => 'lal', 'Lalb_Chr15g0086801' => 'lal', 'Lalb_Chr16g0383781' => 'lal', 'Lalb_Chr16g0383791' => 'lal', 'Lalb_Chr18g0055441' => 'lal', 'Lalb_Chr18g0059611' => 'lal', 'Lalb_Chr20g0109661' => 'lal', 'Lalb_Chr20g0109831' => 'lal', 'Lalb_Chr20g0121871' => 'lal', 'Lalb_Chr22g0355361' => 'lal', 'Lalb_Chr25g0286371' => 'lal', 'Lj1A1187G43' => 'lonja', 'Lj1A1205T50' => 'lonja', 'Lj1A800G33' => 'lonja', 'Lj1C1187T7' => 'lonja', 'Lj1C843T11' => 'lonja', 'Lj1g0010940' => 'lja', 'Lj2A288T69' => 'lonja', 'Lj3g0024276' => 'lja', 'Lj4A47T76' => 'lonja', 'Lj4g0005805' => 'lja', 'Lj4g0006097' => 'lja', 'Lj4g0008528' => 'lja', 'Lj4g0024907' => 'lja', 'Lj5g0012472' => 'lja', 'Lj5g0018648' => 'lja', 'Lj6C789G1' => 'lonja', 'Lj6g0004000' => 'lja', 'Lj7A292G67' => 'lonja', 'Lj7A292T64' => 'lonja', 'Lj9A400T58' => 'lonja', 'Lsat_1_v5_gn_1_126181' => 'lsa', 'Lsat_1_v5_gn_4_123041' => 'lsa', 'Lsat_1_v5_gn_4_133620' => 'lsa', 'Lsat_1_v5_gn_4_53221' => 'lsa', 'Lsat_1_v5_gn_4_71961' => 'lsa', 'Lsat_1_v5_gn_7_105241' => 'lsa', 'Lsat_1_v5_gn_7_21361' => 'lsa', 'Lsat_1_v5_gn_7_28860' => 'lsa', 'Lsat_1_v5_gn_7_31260' => 'lsa', 'Lsat_1_v5_gn_8_52801' => 'lsa', 'Manes.02G191400' => 'mes', 'Manes.03G110100' => 'mes', 'Manes.04G071100' => 'mes', 'Manes.05G100500' => 'mes', 'Manes.05G164700' => 'mes', 'Manes.15G087000' => 'mes', 'Manes.15G121500' => 'mes', 'Manes.16G028300' => 'mes', 'Manes.17G046100' => 'mes', 'Manes.17G069800' => 'mes', 'Manes.18G100500' => 'mes', 'Mapoly0002s0109' => 'mpo', 'Mapoly0024s0007' => 'mpo', 'Mapoly0089s0032' => 'mpo', 'MBI04_g42241_MAGBIO' => 'mbi', 'MBI05_g11988_MAGBIO' => 'mbi', 'MBI05_g35452_MAGBIO' => 'mbi', 'MBI07_g30179_MAGBIO' => 'mbi', 'MBI07_g35859_MAGBIO' => 'mbi', 'MBI07_g35860_MAGBIO' => 'mbi', 'MBI07_g37166_MAGBIO' => 'mbi', 'MBI08_g18172_MAGBIO' => 'mbi', 'MBI09_g08441_MAGBIO' => 'mbi', 'MBI13_g01676_MAGBIO' => 'mbi', 'MBI14_g42955_MAGBIO' => 'mbi', 'MBI16_g13161_MAGBIO' => 'mbi', 'MBI17_g27204_MAGBIO' => 'mbi', 'MBI19_g21595_MAGBIO' => 'mbi', 'MD00G1148400' => 'mdo', 'MD02G1301200' => 'mdo', 'MD03G1227800' => 'mdo', 'MD05G1041100' => 'mdo', 'MD05G1124800' => 'mdo', 'MD05G1284000' => 'mdo', 'MD05G1338800' => 'mdo', 'MD05G1338900' => 'mdo', 'MD07G1022800' => 'mdo', 'MD10G1047500' => 'mdo', 'MD10G1127500' => 'mdo', 'MD10G1262300' => 'mdo', 'MD10G1293800' => 'mdo', 'MD16G1074300' => 'mdo', 'Medtr1g021670' => 'mtr', 'Medtr1g096320' => 'mtr', 'Medtr2g013690' => 'mtr', 'Medtr2g019450' => 'mtr', 'Medtr2g085170' => 'mtr', 'Medtr4g088785' => 'mtr', 'Medtr8g055930' => 'mtr', 'Medtr8g085850' => 'mtr', 'MELO3C002605.2' => 'cme', 'MELO3C003891.2' => 'cme', 'MELO3C004012.2' => 'cme', 'MELO3C007134.2' => 'cme', 'MELO3C008118.2' => 'cme', 'MELO3C016700.2' => 'cme', 'MELO3C024127.2' => 'cme', 'MELO3C033361.2' => 'cme', 'MELO3C033362.2' => 'cme', 'Migut.C00430' => 'egut', 'Migut.C01246' => 'egut', 'Migut.E00101' => 'egut', 'Migut.H01486' => 'egut', 'Migut.H01939' => 'egut', 'Migut.K00360' => 'egut', 'Migut.M00910' => 'egut', 'Migut.M01139' => 'egut', 'Migut.N02677' => 'egut', 'MSTRG.13252' => 'ama', 'MSTRG.14701' => 'ama', 'MSTRG.1521' => 'ama', 'MSTRG.15884' => 'ama', 'MSTRG.16242' => 'ama', 'MSTRG.22285' => 'ama', 'MSTRG.22444' => 'ama', 'MSTRG.2349' => 'ama', 'MSTRG.26308' => 'ama', 'MSTRG.28296' => 'ama', 'MSTRG.9895' => 'ama', 'Nitab4.5_0000110g0060' => 'nta', 'Nitab4.5_0000420g0130' => 'nta', 'Nitab4.5_0000422g0030' => 'nta', 'Nitab4.5_0000560g0180' => 'nta', 'Nitab4.5_0000703g0100' => 'nta', 'Nitab4.5_0000786g0200' => 'nta', 'Nitab4.5_0001336g0020' => 'nta', 'Nitab4.5_0001796g0030' => 'nta', 'Nitab4.5_0003348g0060' => 'nta', 'Nitab4.5_0003698g0040' => 'nta', 'Nitab4.5_0003942g0090' => 'nta', 'Nitab4.5_0004775g0070' => 'nta', 'Nitab4.5_0004864g0030' => 'nta', 'Nitab4.5_0005615g0020' => 'nta', 'Nitab4.5_0009288g0030' => 'nta', 'Nitab4.5_0009341g0010' => 'nta', 'Nitab4.5_0009535g0010' => 'nta', 'Nn1g03995' => 'nnu', 'Nn1g04100' => 'nnu', 'Nn1g06530' => 'nnu', 'Nn3g16404' => 'nnu', 'Nn3g17212' => 'nnu', 'Nn3g20776' => 'nnu', 'Nn3g21923' => 'nnu', 'Nn5g27737' => 'nnu', 'Nn5g29461' => 'nnu', 'Nn7g38355' => 'nnu', 'Nn8g39873' => 'nnu', 'Oeu000548.2' => 'oeu', 'Oeu004672.1' => 'oeu', 'Oeu015605.2' => 'oeu', 'Oeu016092.1' => 'oeu', 'Oeu017879.3' => 'oeu', 'Oeu024910.1' => 'oeu', 'Oeu028965.1' => 'oeu', 'Oeu031269.1' => 'oeu', 'Oeu031270.1' => 'oeu', 'Oeu032535.1' => 'oeu', 'Oeu034151.1' => 'oeu', 'Oeu034152.1' => 'oeu', 'Oeu034588.2' => 'oeu', 'Oeu050846.1' => 'oeu', 'Oeu050849.2' => 'oeu', 'Oeu051063.2' => 'oeu', 'Oeu052368.1' => 'oeu', 'Oeu052370.1' => 'oeu', 'Os01g0210400' => 'osa', 'Os01g0304300' => 'osa', 'Os01g0749100' => 'osa', 'Os02g0745800' => 'osa', 'Os03g0769050' => 'osa', 'Os05g0531500' => 'osa', 'Os06g0724300' => 'osa', 'Os11g0198100' => 'osa', 'Peaxi162Scf00069g01425' => 'pax', 'Peaxi162Scf00280g00811' => 'pax', 'Peaxi162Scf00310g00615' => 'pax', 'Peaxi162Scf00362g00542' => 'pax', 'Peaxi162Scf00461g00310' => 'pax', 'Peaxi162Scf00530g00118' => 'pax', 'Peaxi162Scf00541g00057' => 'pax', 'Peaxi162Scf00661g00017' => 'pax', 'Peaxi162Scf00926g00027' => 'pax', 'Peaxi162Scf01064g00263' => 'pax', 'Peaxi162Scf01211g00135' => 'pax', 'PGR004G2336' => 'pgr', 'PGR042G0327' => 'pgr', 'PGR042G1957' => 'pgr', 'PGR042G2003' => 'pgr', 'PGR042G3929' => 'pgr', 'PGR083G1137' => 'pgr', 'PGR083G1364' => 'pgr', 'PGSC0003DMG400003381' => 'stu', 'PGSC0003DMG400003417' => 'stu', 'PGSC0003DMG400008981' => 'stu', 'PGSC0003DMG400012417' => 'stu', 'PGSC0003DMG400012823' => 'stu', 'PGSC0003DMG400016885' => 'stu', 'PGSC0003DMG400022812' => 'stu', 'PGSC0003DMG400029726' => 'stu', 'PGSC0003DMG401009243' => 'stu', 'PGSC0003DMG401031505' => 'stu', 'PGSC0003DMG402031505' => 'stu', 'Phvul.001G017600' => 'pvu', 'Phvul.002G193500' => 'pvu', 'Phvul.002G228900' => 'pvu', 'Phvul.002G236800' => 'pvu', 'Phvul.003G049500' => 'pvu', 'Phvul.005G072000' => 'pvu', 'Phvul.006G164800' => 'pvu', 'Phvul.006G185100' => 'pvu', 'Phvul.007G090000' => 'pvu', 'Potri.001G399800' => 'ptr', 'Potri.002G149900' => 'ptr', 'Potri.004G044100' => 'ptr', 'Potri.004G177600' => 'ptr', 'Potri.009G138000' => 'ptr', 'Potri.010G094000' => 'ptr', 'Potri.011G053000' => 'ptr', 'Potri.011G119300' => 'ptr', 'Potri.013G113700' => 'ptr', 'Potri.018G107800' => 'ptr', 'Potri.019G084100' => 'ptr', 'Pp3c14_23720' => 'ppa', 'Pp3c16_6340' => 'ppa', 'Pp3c23_13420' => 'ppa', 'Pp3c24_2740' => 'ppa', 'Pp3c25_860' => 'ppa', 'Pp3c8_21750' => 'ppa', 'Prupe.1G273000' => 'ppe', 'Prupe.1G273700' => 'ppe', 'Prupe.1G274100' => 'ppe', 'Prupe.2G023300' => 'ppe', 'Prupe.4G048000' => 'ppe', 'Prupe.4G080400' => 'ppe', 'Prupe.4G181200' => 'ppe', 'Prupe.8G056900' => 'ppe', 'Prupe.8G168700' => 'ppe', 'Psat1g189080' => 'psa', 'Psat1g204760' => 'psa', 'Psat4g175560' => 'psa', 'Psat4g177720' => 'psa', 'Psat5g244240' => 'psa', 'Psat6g010720' => 'psa', 'Psat6g187200' => 'psa', 'Psat7g072040' => 'psa', 'PSO017G3501' => 'pso', 'PSO063G2148' => 'pso', 'PSO063G5608' => 'pso', 'PSO210G6392' => 'pso', 'PSO541G2319' => 'pso', 'PSO541G2836' => 'pso', 'PSO541G4012' => 'pso', 'PSO541G6253' => 'pso', 'PSO675G0580' => 'pso', 'PSO675G0856' => 'pso', 'PSO675G5635' => 'pso', 'PSO675G9157' => 'pso', 'PSO832G1660' => 'pso', 'PSO832G1969' => 'pso', 'QL02p007186' => 'qlo', 'QL02p033904' => 'qlo', 'QL03p064391' => 'qlo', 'QL05p040593' => 'qlo', 'QL05p058242' => 'qlo', 'QL08p021825' => 'qlo', 'QL11p004981' => 'qlo', 'RcHm_v2.0_Chr1g0318301' => 'rch', 'RcHm_v2.0_Chr4g0418501' => 'rch', 'RcHm_v2.0_Chr4g0439971' => 'rch', 'RcHm_v2.0_Chr5g0008541' => 'rch', 'RcHm_v2.0_Chr5g0014101' => 'rch', 'RcHm_v2.0_Chr5g0014131' => 'rch', 'RcHm_v2.0_Chr5g0033621' => 'rch', 'RcHm_v2.0_Chr6g0272041' => 'rch', 'RcHm_v2.0_Chr6g0278831' => 'rch', 'Rhsim02G0130400' => 'rsi', 'Rhsim02G0171100' => 'rsi', 'Rhsim05G0053000' => 'rsi', 'Rhsim05G0053100' => 'rsi', 'Rhsim06G0096500' => 'rsi', 'Rhsim06G0096600' => 'rsi', 'Rhsim06G0199100' => 'rsi', 'Rhsim12G0062300' => 'rsi', 'Rhsim12G0062800' => 'rsi', 'Sabra02G0118600' => 'sbr', 'Sabra04G0027300' => 'sbr', 'Sabra04G0119500' => 'sbr', 'Sabra08G0112500' => 'sbr', 'Sabra11G0036800' => 'sbr', 'Sabra11G0103800' => 'sbr', 'Sabra13G0096300' => 'sbr', 'Sabra16G0262300' => 'sbr', 'Sabra18G0091700' => 'sbr', 'Sabra19G0095400' => 'sbr', 'SalBow6G3080' => 'sbo', 'SalBow7G1157' => 'sbo', 'SalBow7G2123' => 'sbo', 'SalBow7G2285' => 'sbo', 'SalBow7G3537' => 'sbo', 'SalBow8G2947' => 'sbo', 'SalBow8G4463' => 'sbo', 'SalBow8G5466' => 'sbo', 'Sc01g0001750' => 'sci', 'Sc02g0006640' => 'sci', 'Sc02g0006670' => 'sci', 'Sc04g0008220' => 'sci', 'Sc05g0006190' => 'sci', 'Sc08g0002760' => 'sci', 'Sc17g0006170' => 'sci', 'Sc22g0002050' => 'sci', 'Sc23g0001190' => 'sci', 'Sc24g0000980' => 'sci', 'Sed0006245' => 'sed', 'Sed0007543' => 'sed', 'Sed0009411' => 'sed', 'Sed0010765' => 'sed', 'Sed0012944' => 'sed', 'Sed0014682' => 'sed', 'Sed0016174' => 'sed', 'Sed0016796' => 'sed', 'Sed0020317' => 'sed', 'Sed0021467' => 'sed', 'SEGI_01316' => 'sgi', 'SEGI_03374' => 'sgi', 'SEGI_16265' => 'sgi', 'SEGI_18569' => 'sgi', 'SEGI_20351' => 'sgi', 'SEGI_26395' => 'sgi', 'SEGI_29469' => 'sgi', 'SEGI_34771' => 'sgi', 'SEGI_36769' => 'sgi', 'SEGI_37139' => 'sgi', 'SGA_v2.0_scaffold100G29687' => 'sas', 'SGA_v2.0_scaffold118G32472' => 'sas', 'SGA_v2.0_scaffold14G07051' => 'sas', 'SGA_v2.0_scaffold183G39845' => 'sas', 'SGA_v2.0_scaffold1G00174' => 'sas', 'SGA_v2.0_scaffold22G09714' => 'sas', 'SGA_v2.0_scaffold333G48992' => 'sas', 'SGA_v2.0_scaffold46G17491' => 'sas', 'SGA_v2.0_scaffold49G18294' => 'sas', 'SGA_v2.0_scaffold63G21658' => 'sas', 'SHI01741' => 'shi', 'SHI05771' => 'shi', 'SHI18077' => 'shi', 'SHI20525' => 'shi', 'SHI20527' => 'shi', 'SHI20528' => 'shi', 'SMO172G0185' => 'smo', 'SMO198G0020' => 'smo', 'SMO351G0006' => 'smo', 'SMO356G0118' => 'smo', 'SMO358G0296' => 'smo', 'SMO367G0079' => 'smo', 'SMO367G1277' => 'smo', 'Solyc01g014220.3' => 'sly', 'Solyc01g111770.2' => 'sly', 'Solyc02g078180.3' => 'sly', 'Solyc03g006430.3' => 'sly', 'Solyc03g006456.1' => 'sly', 'Solyc03g079860.2' => 'sly', 'Solyc04g079770.3' => 'sly', 'Solyc05g007430.4' => 'sly', 'Solyc07g063150.3' => 'sly', 'Solyc08g016620.3' => 'sly', 'Solyc09g057590.3' => 'sly', 'Solyc09g057600.1' => 'sly', 'Solyc10g009050.3' => 'sly', 'Solyc11g017420.2' => 'sly', 'Sopen01g053810' => 'spe', 'Sopen02g023040' => 'spe', 'Sopen03g002440' => 'spe', 'Sopen04g033350' => 'spe', 'Sopen05g003310' => 'spe', 'Sopen07g004050' => 'spe', 'Sopen07g031340' => 'spe', 'Sopen08g006990' => 'spe', 'Sopen10g004830' => 'spe', 'Sopen11g009370' => 'spe', 'Sp1g24450' => 'spa', 'Sp1g29670' => 'spa', 'Sp1g39600' => 'spa', 'Sp2g11080' => 'spa', 'Sp2g13970' => 'spa', 'Sp4g16130' => 'spa', 'Sp6g13080' => 'spa', 'Sp7g37270' => 'spa', 'TAR371G0065' => 'tar', 'TAR376G0340' => 'tar', 'TAR376G0435' => 'tar', 'TAR381G0002' => 'tar', 'TAR381G1236' => 'tar', 'TAR624G0055' => 'tar', 'TAR624G0324' => 'tar', 'TAR624G0696' => 'tar', 'TAR624G0906' => 'tar', 'TAR625G0107' => 'tar', 'TAR626G0015' => 'tar', 'TAR626G1356' => 'tar', 'TAR627G0888' => 'tar', 'TAR628G0399' => 'tar', 'TAR628G1327' => 'tar', 'TAR629G2831' => 'tar', 'TAR629G2874' => 'tar', 'TAR633G1432' => 'tar', 'TAR633G2771' => 'tar', 'THA.LOC104803394' => 'tha', 'THA.LOC104805153' => 'tha', 'THA.LOC104806784' => 'tha', 'THA.LOC104810473' => 'tha', 'THA.LOC104813100' => 'tha', 'THA.LOC104814215' => 'tha', 'THA.LOC104815554' => 'tha', 'THA.LOC104820544' => 'tha', 'THA.LOC104824754' => 'tha', 'THA.LOC104827717' => 'tha', 'Thecc.02G031400' => 'tca', 'Thecc.02G055900' => 'tca', 'Thecc.02G350800' => 'tca', 'Thecc.06G150900' => 'tca', 'Thecc.06G186600' => 'tca', 'Thecc.07G089600' => 'tca', 'Thecc.08G020400' => 'tca', 'Thecc.08G182100' => 'tca', 'Thhalv10000873m.g' => 'esa', 'Thhalv10004185m.g' => 'esa', 'Thhalv10006981m.g' => 'esa', 'Thhalv10007204m.g' => 'esa', 'Thhalv10011374m.g' => 'esa', 'Thhalv10013482m.g' => 'esa', 'Thhalv10017801m.g' => 'esa', 'Thhalv10024983m.g' => 'esa', 'TPR.G12072' => 'tpr', 'TPR.G15769' => 'tpr', 'TPR.G16504' => 'tpr', 'TPR.G16506' => 'tpr', 'TPR.G24345' => 'tpr', 'TPR.G26666' => 'tpr', 'TPR.G27320' => 'tpr', 'TPR.G31819' => 'tpr', 'TPR.G38879' => 'tpr', 'TPR.G39015' => 'tpr', 'TPR.G8819' => 'tpr', 'TWI09G0924' => 'twi', 'TWI12G0811' => 'twi', 'TWI12G1294' => 'twi', 'TWI31G0150' => 'twi', 'TWI36G1262' => 'twi', 'TWI38G1287' => 'twi', 'TWI38G1633' => 'twi', 'TWI38G1982' => 'twi', 'TWI39G0116' => 'twi', 'TWI60G1011' => 'twi', 'TWI63G0171' => 'twi', 'TWI73G0839' => 'twi', 'TWI79G1511' => 'twi', 'unitig_0.g915' => 'ugi', 'unitig_0.g916' => 'ugi', 'unitig_21.g20219' => 'ugi', 'unitig_21.g20416' => 'ugi', 'unitig_578.g16132' => 'ugi', 'unitig_578.g16718' => 'ugi', 'unitig_62.g23481' => 'ugi', 'unitig_744.g24535' => 'ugi', 'unitig_749.g13525' => 'ugi', 'vmacro01248' => 'vma', 'vmacro02290' => 'vma', 'vmacro10946' => 'vma', 'vmacro11865' => 'vma', 'vmacro12493' => 'vma', 'vmacro17322' => 'vma', 'vmacro21599' => 'vma', 'vmacro23041' => 'vma', 'VMungo0251G0004' => 'vmu', 'VMungo0251G2639' => 'vmu', 'VMungo0251G2967' => 'vmu', 'VMungo0540G0864' => 'vmu', 'VMungo0540G1569' => 'vmu', 'VMungo0647G0317' => 'vmu', 'VMungo0720G1373' => 'vmu', 'VMungo0720G1508' => 'vmu', 'VMungo1080G0485' => 'vmu', 'VMungo1215G3177' => 'vmu', 'Zm00001eb112600' => 'zma', 'Zm00001eb120220' => 'zma', 'Zm00001eb153240' => 'zma', 'Zm00001eb168880' => 'zma', 'Zm00001eb213920' => 'zma', 'Zm00001eb228280' => 'zma', 'Zm00001eb254580' => 'zma', 'Zm00001eb272180' => 'zma', 'Zm00001eb293190' => 'zma', 'Zm00001eb322930' => 'zma', 'Zm00001eb353360' => 'zma', 'Zm00001eb353390' => 'zma', 'Zm00001eb353430' => 'zma', 'Zm00001eb353440' => 'zma', 'Zm00001eb353780' => 'zma' ) $gf_id = 'HOM05D000499' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000499' ) $data_identifier = 'HOM05D000499' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 29, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 12, 'amhyb' => (int) 8, 'aly' => (int) 12, 'aox' => (int) 9, 'arhy' => (int) 26, 'ath' => (int) 8, 'atr' => (int) 7, 'acertr' => (int) 10, 'cqu' => (int) 15, 'bca' => (int) 29, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 11, 'cansat' => (int) 8, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 9, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 8, 'cpa' => (int) 10, 'csa' => (int) 7, 'camsi' => (int) 20, 'dca' => (int) 8, 'din' => (int) 12, 'dzi' => (int) 14, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 6, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 38, 'gra' => (int) 16, 'vvi' => (int) 8, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 5, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 11, 'lja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 11, 'mpo' => (int) 3, 'mbi' => (int) 14, 'mdo' => (int) 14, 'mtr' => (int) 8, 'cme' => (int) 9, 'egut' => (int) 9, 'ama' => (int) 11, 'nta' => (int) 17, 'nnu' => (int) 11, 'oeu' => (int) 18, 'osa' => (int) 8, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 6, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 9, 'rsi' => (int) 9, 'sbr' => (int) 10, 'sbo' => (int) 8, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 10, 'sas' => (int) 10, 'shi' => (int) 6, 'smo' => (int) 7, 'sly' => (int) 14, 'spe' => (int) 10, 'spa' => (int) 8, 'tar' => (int) 19, 'tha' => (int) 10, 'tca' => (int) 8, 'esa' => (int) 8, 'tpr' => (int) 11, 'twi' => (int) 13, 'ugi' => (int) 9, 'vma' => (int) 8, 'vmu' => (int) 10, 'zma' => (int) 15 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb353780' $species_info = array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ) $local_species = 'psa' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000499', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1066', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p29780' => 'bna', 'A02p33180' => 'bna', 'A03p16470' => 'bna', 'A03p66010' => 'bna', 'A04p25970' => 'bna', 'A06p01270' => 'bna', 'A06p46080' => 'bna', 'A07p11400' => 'bna', 'A08p01840' => 'bna', 'A08p08230' => 'bna', 'A08p25740' => 'bna', 'A09p32070' => 'bna', 'A09p37830' => 'bna', 'A09p42840' => 'bna', 'A09p42850' => 'bna', 'Aa31LG10G2060' => 'aar', 'Aa31LG2G7410' => 'aar', 'Aa31LG6G10200' => 'aar', 'Aa31LG6G16680' => 'aar', 'Aa31LG6G8470' => 'aar', 'Aa31LG9G12730' => 'aar', 'Aa31LG9G13680' => 'aar', 'Aa31LG9G14920' => 'aar', 'Aa31LG9G6650' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4977' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5467' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3254' => 'aag', 'Actinidia02578' => 'ach', 'Actinidia07693' => 'ach', 'Actinidia08413' => 'ach', 'Actinidia08414' => 'ach', 'Actinidia15289' => 'ach', 'Actinidia19871' => 'ach', 'Actinidia21475' => 'ach', 'Actinidia22576' => 'ach', 'Actinidia28327' => 'ach', 'Actinidia32491' => 'ach', 'Actinidia39463' => 'ach', 'Actinidia39571' => 'ach', 'Ah.01g013750' => 'amhyb', 'Ah.01g023210' => 'amhyb', 'Ah.04g164850' => 'amhyb', 'Ah.05g178060' => 'amhyb', 'Ah.07g204270' => 'amhyb', 'Ah.07g208480' => 'amhyb', 'Ah.09g237410' => 'amhyb', 'Ah.14g089460' => 'amhyb', 'AL1G41790' => 'aly', 'AL1G49050' => 'aly', 'AL1G53810' => 'aly', 'AL1G61400' => 'aly', 'AL4G18580' => 'aly', 'AL5G12510' => 'aly', 'AL5G12540' => 'aly', 'AL6G43230' => 'aly', 'AL7G10370' => 'aly', 'AL7G19250' => 'aly', 'AL8G12240' => 'aly', 'AL8G18540' => 'aly', 'Aqoxy1G02409' => 'aox', 'Aqoxy2G03993' => 'aox', 'Aqoxy3G03357' => 'aox', 'Aqoxy4G00785' => 'aox', 'Aqoxy5G02598' => 'aox', 'Aqoxy6G00132' => 'aox', 'Aqoxy7G01776' => 'aox', 'Aqoxy7G02316' => 'aox', 'Aqoxy7G03973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.12AFKW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B8730' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27IQR1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3F75VG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3RE0GA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41TCQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.527VTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FIR39' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5W8UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DA38EV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ63HS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H1I32C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HC27T5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4M8AP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7N3CZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9UVDZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LS1NQA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT1D4B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SKC4TM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCFV76' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF9Q1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQWD9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1ZM88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WE07RT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YCK7VH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJE6Q6' => 'arhy', 'AT1G28240' => 'ath', 'AT1G34550' => 'ath', 'AT1G53040' => 'ath', 'AT2G02910' => 'ath', 'AT4G09630' => 'ath', 'AT4G38500' => 'ath', 'AT5G42660' => 'ath', 'AT5G46220' => 'ath', 'ATR0152G026' => 'atr', 'ATR0564G343' => 'atr', 'ATR0706G151' => 'atr', 'ATR0733G207' => 'atr', 'ATR0751G234' => 'atr', 'ATR0807G048' => 'atr', 'ATR1091G084' => 'atr', 'Atru.chr10.1229' => 'acertr', 'Atru.chr10.1230' => 'acertr', 'Atru.chr10.1874' => 'acertr', 'Atru.chr11.1808' => 'acertr', 'Atru.chr13.1795' => 'acertr', 'Atru.chr13.570' => 'acertr', 'Atru.chr2.2608' => 'acertr', 'Atru.chr2.2609' => 'acertr', 'Atru.chr5.3428' => 'acertr', 'Atru.chr8.1171' => 'acertr', 'AUR62004651' => 'cqu', 'AUR62008675' => 'cqu', 'AUR62010014' => 'cqu', 'AUR62013004' => 'cqu', 'AUR62014825' => 'cqu', 'AUR62015015' => 'cqu', 'AUR62015151' => 'cqu', 'AUR62017020' => 'cqu', 'AUR62019422' => 'cqu', 'AUR62023570' => 'cqu', 'AUR62025571' => 'cqu', 'AUR62029098' => 'cqu', 'AUR62033863' => 'cqu', 'AUR62034296' => 'cqu', 'AUR62040075' => 'cqu', 'BcaB02g07334' => 'bca', 'BcaB02g10575' => 'bca', 'BcaB03g12119' => 'bca', 'BcaB03g12120' => 'bca', 'BcaB03g13945' => 'bca', 'BcaB04g17123' => 'bca', 'BcaB04g17867' => 'bca', 'BcaB04g19839' => 'bca', 'BcaB07g30317' => 'bca', 'BcaB07g32432' => 'bca', 'BcaB07g33362' => 'bca', 'BcaB08g36611' => 'bca', 'BcaC01g00028' => 'bca', 'BcaC01g01356' => 'bca', 'BcaC01g02034' => 'bca', 'BcaC01g06051' => 'bca', 'BcaC03g16839' => 'bca', 'BcaC03g17176' => 'bca', 'BcaC05g26829' => 'bca', 'BcaC06g31490' => 'bca', 'BcaC06g35344' => 'bca', 'BcaC06g36570' => 'bca', 'BcaC07g37537' => 'bca', 'BcaC08g43491' => 'bca', 'BcaC08g43773' => 'bca', 'BcaNung00234' => 'bca', 'BcaNung01982' => 'bca', 'BcaNung03707' => 'bca', 'BcaNung06454' => 'bca', 'BolC2t10762H' => 'bol', 'BolC2t11191H' => 'bol', 'BolC3t14322H' => 'bol', 'BolC3t19747H' => 'bol', 'BolC3t21425H' => 'bol', 'BolC4t27800H' => 'bol', 'BolC5t31423H' => 'bol', 'BolC6t35951H' => 'bol', 'BolC6t36282H' => 'bol', 'BolC7t40678H' => 'bol', 'BolC7t40679H' => 'bol', 'BolC7t42222H' => 'bol', 'BolC7t43492H' => 'bol', 'BolC7t46785H' => 'bol', 'BolC8t47853H' => 'bol', 'BolC9t56805H' => 'bol', 'BraA02t08000Z' => 'bra', 'BraA02t08341Z' => 'bra', 'BraA03t10936Z' => 'bra', 'BraA03t15657Z' => 'bra', 'BraA04t18100Z' => 'bra', 'BraA05t20523Z' => 'bra', 'BraA06t23353Z' => 'bra', 'BraA06t27473Z' => 'bra', 'BraA06t27769Z' => 'bra', 'BraA07t28928Z' => 'bra', 'BraA08t32236Z' => 'bra', 'BraA08t32841Z' => 'bra', 'BraA08t34524Z' => 'bra', 'BraA09t38742Z' => 'bra', 'BraA09t39295Z' => 'bra', 'C02p47180' => 'bna', 'C02p50990' => 'bna', 'C03p19360' => 'bna', 'C03p74950' => 'bna', 'C03p91000' => 'bna', 'C04p63260' => 'bna', 'C05p27050' => 'bna', 'C06p08750' => 'bna', 'C06p11490' => 'bna', 'C07p02820' => 'bna', 'C07p17180' => 'bna', 'C07p29440' => 'bna', 'C07p63730' => 'bna', 'C09p39260' => 'bna', 'CAN.G1164.34' => 'can', 'CAN.G1164.39' => 'can', 'CAN.G1530.3' => 'can', 'CAN.G162.61' => 'can', 'CAN.G176.6' => 'can', 'CAN.G289.49' => 'can', 'CAN.G370.21' => 'can', 'CAN.G370.22' => 'can', 'CAN.G371.117' => 'can', 'CAN.G58.37' => 'can', 'CAN.G588.98' => 'can', 'CANSAT21G2266' => 'cansat', 'CANSAT25G2799' => 'cansat', 'CANSAT35G0862' => 'cansat', 'CANSAT35G1704' => 'cansat', 'CANSAT35G1760' => 'cansat', 'CANSAT56G3971' => 'cansat', 'CANSAT56G4116' => 'cansat', 'CANSAT80G1259' => 'cansat', 'CARHR027730' => 'chi', 'CARHR033880' => 'chi', 'CARHR043270' => 'chi', 'CARHR145330' => 'chi', 'CARHR145340' => 'chi', 'CARHR175570' => 'chi', 'CARHR181570' => 'chi', 'CARHR258470' => 'chi', 'CARHR260490' => 'chi', 'CARHR294220' => 'chi', 'Carub.0001s2668' => 'cru', 'Carub.0001s3257' => 'cru', 'Carub.0001s4220' => 'cru', 'Carub.0005s0179' => 'cru', 'Carub.0006s2807' => 'cru', 'Carub.0007s0039' => 'cru', 'Carub.0008s0169' => 'cru', 'Carub.0008s0636' => 'cru', 'Ca_00338_v3' => 'car', 'Ca_00542_v3' => 'car', 'Ca_01844_v3' => 'car', 'Ca_10611_v3' => 'car', 'Ca_13326_v3' => 'car', 'Ca_17944_v3' => 'car', 'Ca_18546_v3' => 'car', 'Ca_24219_v3' => 'car', 'Ca_29972_v3' => 'car', 'CBR_g3681' => 'cbr', 'CBR_g40021' => 'cbr', 'Cc01_g08140' => 'ccan', 'Cc02_g13410' => 'ccan', 'Cc02_g37480' => 'ccan', 'Cc05_g12030' => 'ccan', 'Cc09_g03370' => 'ccan', 'Cc09_g10300' => 'ccan', 'Cc10_g03530' => 'ccan', 'Cc10_g11380' => 'ccan', 'CDE01G0176' => 'cde', 'CDE02G0675' => 'cde', 'CDE02G0942' => 'cde', 'CDE02G1153' => 'cde', 'CDE02G4177' => 'cde', 'CDE04G2117' => 'cde', 'CDE04G2736' => 'cde', 'CDE08G1161' => 'cde', 'CDE09G1238' => 'cde', 'Cfa000467' => 'cfa', 'Cfa000947' => 'cfa', 'Cfa004969' => 'cfa', 'Cfa005284' => 'cfa', 'Cfa008993' => 'cfa', 'Cfa018187' => 'cfa', 'Cfa018454' => 'cfa', 'Cfa020585' => 'cfa', 'Ciclev10000424m.g' => 'ccl', 'Ciclev10003605m.g' => 'ccl', 'Ciclev10007828m.g' => 'ccl', 'Ciclev10014620m.g' => 'ccl', 'Ciclev10015169m.g' => 'ccl', 'Ciclev10018291m.g' => 'ccl', 'Ciclev10028256m.g' => 'ccl', 'Ciclev10033822m.g' => 'ccl', 'CiPaw.05G060300' => 'cil', 'CiPaw.05G085000' => 'cil', 'CiPaw.06G083700' => 'cil', 'CiPaw.06G120300' => 'cil', 'CiPaw.09G060500' => 'cil', 'CiPaw.09G123800' => 'cil', 'CiPaw.11G169700' => 'cil', 'CiPaw.12G118300' => 'cil', 'CiPaw.15G071000' => 'cil', 'CiPaw.15G081900' => 'cil', 'ClCG01G024610' => 'cla', 'ClCG03G006070' => 'cla', 'ClCG05G019250' => 'cla', 'ClCG09G009500' => 'cla', 'ClCG11G008200' => 'cla', 'ClCG11G018080' => 'cla', 'COL.COLO4_17373' => 'col', 'COL.COLO4_22994' => 'col', 'COL.COLO4_26389' => 'col', 'COL.COLO4_27170' => 'col', 'COL.COLO4_31074' => 'col', 'COL.COLO4_31465' => 'col', 'COL.COLO4_36438' => 'col', 'COL.COLO4_36439' => 'col', 'Cpa.g.c38781' => 'cpa', 'Cpa.g.sc128.12' => 'cpa', 'Cpa.g.sc166.7' => 'cpa', 'Cpa.g.sc166.8' => 'cpa', 'Cpa.g.sc20.111' => 'cpa', 'Cpa.g.sc27.31' => 'cpa', 'Cpa.g.sc64.36' => 'cpa', 'Cpa.g.sc64.37' => 'cpa', 'Cpa.g.sc66.49' => 'cpa', 'Cpa.g.sc80.64' => 'cpa', 'CsaV3_1G012320' => 'csa', 'CsaV3_2G008480' => 'csa', 'CsaV3_2G033450' => 'csa', 'CsaV3_3G044830' => 'csa', 'CsaV3_4G033710' => 'csa', 'CsaV3_6G051730' => 'csa', 'CsaV3_7G025350' => 'csa', 'CSS0001067' => 'camsi', 'CSS0005996' => 'camsi', 'CSS0006590' => 'camsi', 'CSS0009673' => 'camsi', 'CSS0010201' => 'camsi', 'CSS0010549' => 'camsi', 'CSS0011364' => 'camsi', 'CSS0014473' => 'camsi', 'CSS0014961' => 'camsi', 'CSS0020191' => 'camsi', 'CSS0021165' => 'camsi', 'CSS0022306' => 'camsi', 'CSS0030591' => 'camsi', 'CSS0030696' => 'camsi', 'CSS0032653' => 'camsi', 'CSS0037487' => 'camsi', 'CSS0041102' => 'camsi', 'CSS0041261' => 'camsi', 'CSS0046246' => 'camsi', 'CSS0049256' => 'camsi', 'DCAR_004075' => 'dca', 'DCAR_011538' => 'dca', 'DCAR_019553' => 'dca', 'DCAR_020952' => 'dca', 'DCAR_021739' => 'dca', 'DCAR_027407' => 'dca', 'DCAR_027913' => 'dca', 'DCAR_028066' => 'dca', 'Dinv05899' => 'din', 'Dinv07563' => 'din', 'Dinv08010' => 'din', 'Dinv14125' => 'din', 'Dinv20172' => 'din', 'Dinv30743' => 'din', 'Dinv31229' => 'din', 'Dinv34162' => 'din', 'Dinv36028' => 'din', 'Dinv39368' => 'din', 'Dinv40565' => 'din', 'Dinv41706' => 'din', 'Duzib052G0089' => 'dzi', 'Duzib116G0641' => 'dzi', 'Duzib132G0069' => 'dzi', 'Duzib132G1219' => 'dzi', 'Duzib147G0278' => 'dzi', 'Duzib160G0480' => 'dzi', 'Duzib170G0661' => 'dzi', 'Duzib177G0591' => 'dzi', 'Duzib187G1353' => 'dzi', 'Duzib192G0858' => 'dzi', 'Duzib192G0883' => 'dzi', 'Duzib213G0506' => 'dzi', 'Duzib235G0289' => 'dzi', 'Duzib251G0422' => 'dzi', 'ECA232G3898' => 'eca', 'ECA233G5950' => 'eca', 'ECA234G1699' => 'eca', 'ECA234G2421' => 'eca', 'ECA236G0426' => 'eca', 'ECA236G4331' => 'eca', 'ECA248G2573' => 'eca', 'EL10Ac1g00077' => 'bvu', 'EL10Ac1g01746' => 'bvu', 'EL10Ac2g03464' => 'bvu', 'EL10Ac4g08176' => 'bvu', 'EL10Ac7g17521' => 'bvu', 'EL10Ac8g20386' => 'bvu', 'EL10Ac9g21343' => 'bvu', 'EL10Ac9g22688' => 'bvu', 'Eucgr.B03434' => 'egr', 'Eucgr.D00618' => 'egr', 'Eucgr.E02395' => 'egr', 'Eucgr.F01129' => 'egr', 'Eucgr.F02622' => 'egr', 'Eucgr.F04207' => 'egr', 'FAN01G0570' => 'fan', 'FAN03G3351' => 'fan', 'FAN06G3702' => 'fan', 'FAN07G2149' => 'fan', 'FAN10G3758' => 'fan', 'FAN11G1170' => 'fan', 'FAN11G2050' => 'fan', 'FAN11G2724' => 'fan', 'FAN12G1700' => 'fan', 'FAN12G2028' => 'fan', 'FAN15G1160' => 'fan', 'FAN15G3063' => 'fan', 'FAN16G2540' => 'fan', 'FAN16G3077' => 'fan', 'FAN16G3624' => 'fan', 'FAN17G0221' => 'fan', 'FAN20G2492' => 'fan', 'FAN20G2905' => 'fan', 'FAN21G0548' => 'fan', 'FAN21G1300' => 'fan', 'FAN22G0077' => 'fan', 'FAN22G1315' => 'fan', 'FAN24G1280' => 'fan', 'FAN24G1445' => 'fan', 'FAN24G3527' => 'fan', 'FAN25G0464' => 'fan', 'FAN25G2885' => 'fan', 'FAN25G3270' => 'fan', 'FAN27G1101' => 'fan', 'FAN27G2846' => 'fan', 'FAN27G3524' => 'fan', 'FvH4_2g11770' => 'fve', 'FvH4_2g15630' => 'fve', 'FvH4_3g05570' => 'fve', 'FvH4_3g09110' => 'fve', 'FvH4_3g19940' => 'fve', 'FvH4_4g04821' => 'fve', 'FvH4_4g31480' => 'fve', 'FvH4_7g01740' => 'fve', 'Glyma.05G130400' => 'gma', 'Glyma.05G156400' => 'gma', 'Glyma.07G197000' => 'gma', 'Glyma.08G085151' => 'gma', 'Glyma.08G114500' => 'gma', 'Glyma.08G300400' => 'gma', 'Glyma.10G215800' => 'gma', 'Glyma.12G224400' => 'gma', 'Glyma.13G179300' => 'gma', 'Glyma.13G218151' => 'gma', 'Glyma.13G238800' => 'gma', 'Glyma.13G276900' => 'gma', 'Glyma.14G078200' => 'gma', 'Glyma.15G074500' => 'gma', 'Glyma.15G094100' => 'gma', 'Glyma.17G247200' => 'gma', 'Glyma.18G120100' => 'gma', 'Glyma.20G176000' => 'gma', 'Gohir.A01G063600' => 'ghi', 'Gohir.A01G170301' => 'ghi', 'Gohir.A02G060500' => 'ghi', 'Gohir.A05G133850' => 'ghi', 'Gohir.A05G161400' => 'ghi', 'Gohir.A06G012900' => 'ghi', 'Gohir.A06G035901' => 'ghi', 'Gohir.A06G127100' => 'ghi', 'Gohir.A06G210500' => 'ghi', 'Gohir.A08G008650' => 'ghi', 'Gohir.A09G072700' => 'ghi', 'Gohir.A09G088301' => 'ghi', 'Gohir.A10G040600' => 'ghi', 'Gohir.A12G036300' => 'ghi', 'Gohir.A12G143350' => 'ghi', 'Gohir.A12G165500' => 'ghi', 'Gohir.A13G145700' => 'ghi', 'Gohir.D01G050000' => 'ghi', 'Gohir.D01G051366' => 'ghi', 'Gohir.D01G161350' => 'ghi', 'Gohir.D02G065900' => 'ghi', 'Gohir.D05G164200' => 'ghi', 'Gohir.D05G355500' => 'ghi', 'Gohir.D06G010400' => 'ghi', 'Gohir.D06G111250' => 'ghi', 'Gohir.D06G132000' => 'ghi', 'Gohir.D06G210500' => 'ghi', 'Gohir.D07G165675' => 'ghi', 'Gohir.D08G062240' => 'ghi', 'Gohir.D08G086101' => 'ghi', 'Gohir.D08G138060' => 'ghi', 'Gohir.D09G072300' => 'ghi', 'Gohir.D10G041400' => 'ghi', 'Gohir.D11G191020' => 'ghi', 'Gohir.D11G212066' => 'ghi', 'Gohir.D12G036300' => 'ghi', 'Gohir.D12G168600' => 'ghi', 'Gohir.D13G150600' => 'ghi', 'Gorai.001G057300' => 'gra', 'Gorai.002G069900' => 'gra', 'Gorai.002G200000' => 'gra', 'Gorai.003G067600' => 'gra', 'Gorai.005G074800' => 'gra', 'Gorai.006G087300' => 'gra', 'Gorai.008G037500' => 'gra', 'Gorai.008G181400' => 'gra', 'Gorai.009G169400' => 'gra', 'Gorai.009G387900' => 'gra', 'Gorai.010G013300' => 'gra', 'Gorai.010G153800' => 'gra', 'Gorai.010G255800' => 'gra', 'Gorai.011G043700' => 'gra', 'Gorai.011G198900' => 'gra', 'Gorai.013G168400' => 'gra', 'GSVIVG01005212001' => 'vvi', 'GSVIVG01006163001' => 'vvi', 'GSVIVG01009625001' => 'vvi', 'GSVIVG01014338001' => 'vvi', 'GSVIVG01020005001' => 'vvi', 'GSVIVG01021450001' => 'vvi', 'GSVIVG01023975001' => 'vvi', 'GSVIVG01034490001' => 'vvi', 'HanXRQChr04g0112071' => 'han', 'HanXRQChr05g0131151' => 'han', 'HanXRQChr09g0262371' => 'han', 'HanXRQChr09g0268401' => 'han', 'HanXRQChr10g0279241' => 'han', 'HanXRQChr10g0297961' => 'han', 'HanXRQChr11g0326231' => 'han', 'HanXRQChr11g0328471' => 'han', 'HanXRQChr16g0507941' => 'han', 'HanXRQChr17g0560211' => 'han', 'Haze_02108' => 'cav', 'Haze_02428' => 'cav', 'Haze_05593' => 'cav', 'Haze_06448' => 'cav', 'Haze_09427' => 'cav', 'Haze_12022' => 'cav', 'Haze_17612' => 'cav', 'Haze_17928' => 'cav', 'Hma1.2p1_0032F.1_g019250' => 'hma', 'Hma1.2p1_0163F.1_g072690' => 'hma', 'Hma1.2p1_0265F.1_g106710' => 'hma', 'Hma1.2p1_0286F.1_g113970' => 'hma', 'Hma1.2p1_0363F.1_g136640' => 'hma', 'Hma1.2p1_0584F.1_g183470' => 'hma', 'Hma1.2p1_0885F.1_g232570' => 'hma', 'HPP92_006022' => 'vpl', 'HPP92_007320' => 'vpl', 'HPP92_011521' => 'vpl', 'HPP92_019387' => 'vpl', 'HPP92_024038' => 'vpl', 'Hund05891' => 'sun', 'Hund06450' => 'sun', 'Hund12053' => 'sun', 'Hund16800' => 'sun', 'Hund21222' => 'sun', 'Hund22896' => 'sun', 'Hund23746' => 'sun', 'Hund27083' => 'sun', 'Lalb_Chr02g0141831' => 'lal', 'Lalb_Chr02g0141841' => 'lal', 'Lalb_Chr05g0220411' => 'lal', 'Lalb_Chr06g0162081' => 'lal', 'Lalb_Chr09g0327651' => 'lal', 'Lalb_Chr13g0295051' => 'lal', 'Lalb_Chr15g0086801' => 'lal', 'Lalb_Chr16g0383781' => 'lal', 'Lalb_Chr16g0383791' => 'lal', 'Lalb_Chr18g0055441' => 'lal', 'Lalb_Chr18g0059611' => 'lal', 'Lalb_Chr20g0109661' => 'lal', 'Lalb_Chr20g0109831' => 'lal', 'Lalb_Chr20g0121871' => 'lal', 'Lalb_Chr22g0355361' => 'lal', 'Lalb_Chr25g0286371' => 'lal', 'Lj1A1187G43' => 'lonja', 'Lj1A1205T50' => 'lonja', 'Lj1A800G33' => 'lonja', 'Lj1C1187T7' => 'lonja', 'Lj1C843T11' => 'lonja', 'Lj1g0010940' => 'lja', 'Lj2A288T69' => 'lonja', 'Lj3g0024276' => 'lja', 'Lj4A47T76' => 'lonja', 'Lj4g0005805' => 'lja', 'Lj4g0006097' => 'lja', 'Lj4g0008528' => 'lja', 'Lj4g0024907' => 'lja', 'Lj5g0012472' => 'lja', 'Lj5g0018648' => 'lja', 'Lj6C789G1' => 'lonja', 'Lj6g0004000' => 'lja', 'Lj7A292G67' => 'lonja', 'Lj7A292T64' => 'lonja', 'Lj9A400T58' => 'lonja', 'Lsat_1_v5_gn_1_126181' => 'lsa', 'Lsat_1_v5_gn_4_123041' => 'lsa', 'Lsat_1_v5_gn_4_133620' => 'lsa', 'Lsat_1_v5_gn_4_53221' => 'lsa', 'Lsat_1_v5_gn_4_71961' => 'lsa', 'Lsat_1_v5_gn_7_105241' => 'lsa', 'Lsat_1_v5_gn_7_21361' => 'lsa', 'Lsat_1_v5_gn_7_28860' => 'lsa', 'Lsat_1_v5_gn_7_31260' => 'lsa', 'Lsat_1_v5_gn_8_52801' => 'lsa', 'Manes.02G191400' => 'mes', 'Manes.03G110100' => 'mes', 'Manes.04G071100' => 'mes', 'Manes.05G100500' => 'mes', 'Manes.05G164700' => 'mes', 'Manes.15G087000' => 'mes', 'Manes.15G121500' => 'mes', 'Manes.16G028300' => 'mes', 'Manes.17G046100' => 'mes', 'Manes.17G069800' => 'mes', 'Manes.18G100500' => 'mes', 'Mapoly0002s0109' => 'mpo', 'Mapoly0024s0007' => 'mpo', 'Mapoly0089s0032' => 'mpo', 'MBI04_g42241_MAGBIO' => 'mbi', 'MBI05_g11988_MAGBIO' => 'mbi', 'MBI05_g35452_MAGBIO' => 'mbi', 'MBI07_g30179_MAGBIO' => 'mbi', 'MBI07_g35859_MAGBIO' => 'mbi', 'MBI07_g35860_MAGBIO' => 'mbi', 'MBI07_g37166_MAGBIO' => 'mbi', 'MBI08_g18172_MAGBIO' => 'mbi', 'MBI09_g08441_MAGBIO' => 'mbi', 'MBI13_g01676_MAGBIO' => 'mbi', 'MBI14_g42955_MAGBIO' => 'mbi', 'MBI16_g13161_MAGBIO' => 'mbi', 'MBI17_g27204_MAGBIO' => 'mbi', 'MBI19_g21595_MAGBIO' => 'mbi', 'MD00G1148400' => 'mdo', 'MD02G1301200' => 'mdo', 'MD03G1227800' => 'mdo', 'MD05G1041100' => 'mdo', 'MD05G1124800' => 'mdo', 'MD05G1284000' => 'mdo', 'MD05G1338800' => 'mdo', 'MD05G1338900' => 'mdo', 'MD07G1022800' => 'mdo', 'MD10G1047500' => 'mdo', 'MD10G1127500' => 'mdo', 'MD10G1262300' => 'mdo', 'MD10G1293800' => 'mdo', 'MD16G1074300' => 'mdo', 'Medtr1g021670' => 'mtr', 'Medtr1g096320' => 'mtr', 'Medtr2g013690' => 'mtr', 'Medtr2g019450' => 'mtr', 'Medtr2g085170' => 'mtr', 'Medtr4g088785' => 'mtr', 'Medtr8g055930' => 'mtr', 'Medtr8g085850' => 'mtr', 'MELO3C002605.2' => 'cme', 'MELO3C003891.2' => 'cme', 'MELO3C004012.2' => 'cme', 'MELO3C007134.2' => 'cme', 'MELO3C008118.2' => 'cme', 'MELO3C016700.2' => 'cme', 'MELO3C024127.2' => 'cme', 'MELO3C033361.2' => 'cme', 'MELO3C033362.2' => 'cme', 'Migut.C00430' => 'egut', 'Migut.C01246' => 'egut', 'Migut.E00101' => 'egut', 'Migut.H01486' => 'egut', 'Migut.H01939' => 'egut', 'Migut.K00360' => 'egut', 'Migut.M00910' => 'egut', 'Migut.M01139' => 'egut', 'Migut.N02677' => 'egut', 'MSTRG.13252' => 'ama', 'MSTRG.14701' => 'ama', 'MSTRG.1521' => 'ama', 'MSTRG.15884' => 'ama', 'MSTRG.16242' => 'ama', 'MSTRG.22285' => 'ama', 'MSTRG.22444' => 'ama', 'MSTRG.2349' => 'ama', 'MSTRG.26308' => 'ama', 'MSTRG.28296' => 'ama', 'MSTRG.9895' => 'ama', 'Nitab4.5_0000110g0060' => 'nta', 'Nitab4.5_0000420g0130' => 'nta', 'Nitab4.5_0000422g0030' => 'nta', 'Nitab4.5_0000560g0180' => 'nta', 'Nitab4.5_0000703g0100' => 'nta', 'Nitab4.5_0000786g0200' => 'nta', 'Nitab4.5_0001336g0020' => 'nta', 'Nitab4.5_0001796g0030' => 'nta', 'Nitab4.5_0003348g0060' => 'nta', 'Nitab4.5_0003698g0040' => 'nta', 'Nitab4.5_0003942g0090' => 'nta', 'Nitab4.5_0004775g0070' => 'nta', 'Nitab4.5_0004864g0030' => 'nta', 'Nitab4.5_0005615g0020' => 'nta', 'Nitab4.5_0009288g0030' => 'nta', 'Nitab4.5_0009341g0010' => 'nta', 'Nitab4.5_0009535g0010' => 'nta', 'Nn1g03995' => 'nnu', 'Nn1g04100' => 'nnu', 'Nn1g06530' => 'nnu', 'Nn3g16404' => 'nnu', 'Nn3g17212' => 'nnu', 'Nn3g20776' => 'nnu', 'Nn3g21923' => 'nnu', 'Nn5g27737' => 'nnu', 'Nn5g29461' => 'nnu', 'Nn7g38355' => 'nnu', 'Nn8g39873' => 'nnu', 'Oeu000548.2' => 'oeu', 'Oeu004672.1' => 'oeu', 'Oeu015605.2' => 'oeu', 'Oeu016092.1' => 'oeu', 'Oeu017879.3' => 'oeu', 'Oeu024910.1' => 'oeu', 'Oeu028965.1' => 'oeu', 'Oeu031269.1' => 'oeu', 'Oeu031270.1' => 'oeu', 'Oeu032535.1' => 'oeu', 'Oeu034151.1' => 'oeu', 'Oeu034152.1' => 'oeu', 'Oeu034588.2' => 'oeu', 'Oeu050846.1' => 'oeu', 'Oeu050849.2' => 'oeu', 'Oeu051063.2' => 'oeu', 'Oeu052368.1' => 'oeu', 'Oeu052370.1' => 'oeu', 'Os01g0210400' => 'osa', 'Os01g0304300' => 'osa', 'Os01g0749100' => 'osa', 'Os02g0745800' => 'osa', 'Os03g0769050' => 'osa', 'Os05g0531500' => 'osa', 'Os06g0724300' => 'osa', 'Os11g0198100' => 'osa', 'Peaxi162Scf00069g01425' => 'pax', 'Peaxi162Scf00280g00811' => 'pax', 'Peaxi162Scf00310g00615' => 'pax', 'Peaxi162Scf00362g00542' => 'pax', 'Peaxi162Scf00461g00310' => 'pax', 'Peaxi162Scf00530g00118' => 'pax', 'Peaxi162Scf00541g00057' => 'pax', 'Peaxi162Scf00661g00017' => 'pax', 'Peaxi162Scf00926g00027' => 'pax', 'Peaxi162Scf01064g00263' => 'pax', 'Peaxi162Scf01211g00135' => 'pax', 'PGR004G2336' => 'pgr', 'PGR042G0327' => 'pgr', 'PGR042G1957' => 'pgr', 'PGR042G2003' => 'pgr', 'PGR042G3929' => 'pgr', 'PGR083G1137' => 'pgr', 'PGR083G1364' => 'pgr', 'PGSC0003DMG400003381' => 'stu', 'PGSC0003DMG400003417' => 'stu', 'PGSC0003DMG400008981' => 'stu', 'PGSC0003DMG400012417' => 'stu', 'PGSC0003DMG400012823' => 'stu', 'PGSC0003DMG400016885' => 'stu', 'PGSC0003DMG400022812' => 'stu', 'PGSC0003DMG400029726' => 'stu', 'PGSC0003DMG401009243' => 'stu', 'PGSC0003DMG401031505' => 'stu', 'PGSC0003DMG402031505' => 'stu', 'Phvul.001G017600' => 'pvu', 'Phvul.002G193500' => 'pvu', 'Phvul.002G228900' => 'pvu', 'Phvul.002G236800' => 'pvu', 'Phvul.003G049500' => 'pvu', 'Phvul.005G072000' => 'pvu', 'Phvul.006G164800' => 'pvu', 'Phvul.006G185100' => 'pvu', 'Phvul.007G090000' => 'pvu', 'Potri.001G399800' => 'ptr', 'Potri.002G149900' => 'ptr', 'Potri.004G044100' => 'ptr', 'Potri.004G177600' => 'ptr', 'Potri.009G138000' => 'ptr', 'Potri.010G094000' => 'ptr', 'Potri.011G053000' => 'ptr', 'Potri.011G119300' => 'ptr', 'Potri.013G113700' => 'ptr', 'Potri.018G107800' => 'ptr', 'Potri.019G084100' => 'ptr', 'Pp3c14_23720' => 'ppa', 'Pp3c16_6340' => 'ppa', 'Pp3c23_13420' => 'ppa', 'Pp3c24_2740' => 'ppa', 'Pp3c25_860' => 'ppa', 'Pp3c8_21750' => 'ppa', 'Prupe.1G273000' => 'ppe', 'Prupe.1G273700' => 'ppe', 'Prupe.1G274100' => 'ppe', 'Prupe.2G023300' => 'ppe', 'Prupe.4G048000' => 'ppe', 'Prupe.4G080400' => 'ppe', 'Prupe.4G181200' => 'ppe', 'Prupe.8G056900' => 'ppe', 'Prupe.8G168700' => 'ppe', 'Psat1g189080' => 'psa', 'Psat1g204760' => 'psa', 'Psat4g175560' => 'psa', 'Psat4g177720' => 'psa', 'Psat5g244240' => 'psa', 'Psat6g010720' => 'psa', 'Psat6g187200' => 'psa', 'Psat7g072040' => 'psa', 'PSO017G3501' => 'pso', 'PSO063G2148' => 'pso', 'PSO063G5608' => 'pso', 'PSO210G6392' => 'pso', 'PSO541G2319' => 'pso', 'PSO541G2836' => 'pso', 'PSO541G4012' => 'pso', 'PSO541G6253' => 'pso', 'PSO675G0580' => 'pso', 'PSO675G0856' => 'pso', 'PSO675G5635' => 'pso', 'PSO675G9157' => 'pso', 'PSO832G1660' => 'pso', 'PSO832G1969' => 'pso', 'QL02p007186' => 'qlo', 'QL02p033904' => 'qlo', 'QL03p064391' => 'qlo', 'QL05p040593' => 'qlo', 'QL05p058242' => 'qlo', 'QL08p021825' => 'qlo', 'QL11p004981' => 'qlo', 'RcHm_v2.0_Chr1g0318301' => 'rch', 'RcHm_v2.0_Chr4g0418501' => 'rch', 'RcHm_v2.0_Chr4g0439971' => 'rch', 'RcHm_v2.0_Chr5g0008541' => 'rch', 'RcHm_v2.0_Chr5g0014101' => 'rch', 'RcHm_v2.0_Chr5g0014131' => 'rch', 'RcHm_v2.0_Chr5g0033621' => 'rch', 'RcHm_v2.0_Chr6g0272041' => 'rch', 'RcHm_v2.0_Chr6g0278831' => 'rch', 'Rhsim02G0130400' => 'rsi', 'Rhsim02G0171100' => 'rsi', 'Rhsim05G0053000' => 'rsi', 'Rhsim05G0053100' => 'rsi', 'Rhsim06G0096500' => 'rsi', 'Rhsim06G0096600' => 'rsi', 'Rhsim06G0199100' => 'rsi', 'Rhsim12G0062300' => 'rsi', 'Rhsim12G0062800' => 'rsi', 'Sabra02G0118600' => 'sbr', 'Sabra04G0027300' => 'sbr', 'Sabra04G0119500' => 'sbr', 'Sabra08G0112500' => 'sbr', 'Sabra11G0036800' => 'sbr', 'Sabra11G0103800' => 'sbr', 'Sabra13G0096300' => 'sbr', 'Sabra16G0262300' => 'sbr', 'Sabra18G0091700' => 'sbr', 'Sabra19G0095400' => 'sbr', 'SalBow6G3080' => 'sbo', 'SalBow7G1157' => 'sbo', 'SalBow7G2123' => 'sbo', 'SalBow7G2285' => 'sbo', 'SalBow7G3537' => 'sbo', 'SalBow8G2947' => 'sbo', 'SalBow8G4463' => 'sbo', 'SalBow8G5466' => 'sbo', 'Sc01g0001750' => 'sci', 'Sc02g0006640' => 'sci', 'Sc02g0006670' => 'sci', 'Sc04g0008220' => 'sci', 'Sc05g0006190' => 'sci', 'Sc08g0002760' => 'sci', 'Sc17g0006170' => 'sci', 'Sc22g0002050' => 'sci', 'Sc23g0001190' => 'sci', 'Sc24g0000980' => 'sci', 'Sed0006245' => 'sed', 'Sed0007543' => 'sed', 'Sed0009411' => 'sed', 'Sed0010765' => 'sed', 'Sed0012944' => 'sed', 'Sed0014682' => 'sed', 'Sed0016174' => 'sed', 'Sed0016796' => 'sed', 'Sed0020317' => 'sed', 'Sed0021467' => 'sed', 'SEGI_01316' => 'sgi', 'SEGI_03374' => 'sgi', 'SEGI_16265' => 'sgi', 'SEGI_18569' => 'sgi', 'SEGI_20351' => 'sgi', 'SEGI_26395' => 'sgi', 'SEGI_29469' => 'sgi', 'SEGI_34771' => 'sgi', 'SEGI_36769' => 'sgi', 'SEGI_37139' => 'sgi', 'SGA_v2.0_scaffold100G29687' => 'sas', 'SGA_v2.0_scaffold118G32472' => 'sas', 'SGA_v2.0_scaffold14G07051' => 'sas', 'SGA_v2.0_scaffold183G39845' => 'sas', 'SGA_v2.0_scaffold1G00174' => 'sas', 'SGA_v2.0_scaffold22G09714' => 'sas', 'SGA_v2.0_scaffold333G48992' => 'sas', 'SGA_v2.0_scaffold46G17491' => 'sas', 'SGA_v2.0_scaffold49G18294' => 'sas', 'SGA_v2.0_scaffold63G21658' => 'sas', 'SHI01741' => 'shi', 'SHI05771' => 'shi', 'SHI18077' => 'shi', 'SHI20525' => 'shi', 'SHI20527' => 'shi', 'SHI20528' => 'shi', 'SMO172G0185' => 'smo', 'SMO198G0020' => 'smo', 'SMO351G0006' => 'smo', 'SMO356G0118' => 'smo', 'SMO358G0296' => 'smo', 'SMO367G0079' => 'smo', 'SMO367G1277' => 'smo', 'Solyc01g014220.3' => 'sly', 'Solyc01g111770.2' => 'sly', 'Solyc02g078180.3' => 'sly', 'Solyc03g006430.3' => 'sly', 'Solyc03g006456.1' => 'sly', 'Solyc03g079860.2' => 'sly', 'Solyc04g079770.3' => 'sly', 'Solyc05g007430.4' => 'sly', 'Solyc07g063150.3' => 'sly', 'Solyc08g016620.3' => 'sly', 'Solyc09g057590.3' => 'sly', 'Solyc09g057600.1' => 'sly', 'Solyc10g009050.3' => 'sly', 'Solyc11g017420.2' => 'sly', 'Sopen01g053810' => 'spe', 'Sopen02g023040' => 'spe', 'Sopen03g002440' => 'spe', 'Sopen04g033350' => 'spe', 'Sopen05g003310' => 'spe', 'Sopen07g004050' => 'spe', 'Sopen07g031340' => 'spe', 'Sopen08g006990' => 'spe', 'Sopen10g004830' => 'spe', 'Sopen11g009370' => 'spe', 'Sp1g24450' => 'spa', 'Sp1g29670' => 'spa', 'Sp1g39600' => 'spa', 'Sp2g11080' => 'spa', 'Sp2g13970' => 'spa', 'Sp4g16130' => 'spa', 'Sp6g13080' => 'spa', 'Sp7g37270' => 'spa', 'TAR371G0065' => 'tar', 'TAR376G0340' => 'tar', 'TAR376G0435' => 'tar', 'TAR381G0002' => 'tar', 'TAR381G1236' => 'tar', 'TAR624G0055' => 'tar', 'TAR624G0324' => 'tar', 'TAR624G0696' => 'tar', 'TAR624G0906' => 'tar', 'TAR625G0107' => 'tar', 'TAR626G0015' => 'tar', 'TAR626G1356' => 'tar', 'TAR627G0888' => 'tar', 'TAR628G0399' => 'tar', 'TAR628G1327' => 'tar', 'TAR629G2831' => 'tar', 'TAR629G2874' => 'tar', 'TAR633G1432' => 'tar', 'TAR633G2771' => 'tar', 'THA.LOC104803394' => 'tha', 'THA.LOC104805153' => 'tha', 'THA.LOC104806784' => 'tha', 'THA.LOC104810473' => 'tha', 'THA.LOC104813100' => 'tha', 'THA.LOC104814215' => 'tha', 'THA.LOC104815554' => 'tha', 'THA.LOC104820544' => 'tha', 'THA.LOC104824754' => 'tha', 'THA.LOC104827717' => 'tha', 'Thecc.02G031400' => 'tca', 'Thecc.02G055900' => 'tca', 'Thecc.02G350800' => 'tca', 'Thecc.06G150900' => 'tca', 'Thecc.06G186600' => 'tca', 'Thecc.07G089600' => 'tca', 'Thecc.08G020400' => 'tca', 'Thecc.08G182100' => 'tca', 'Thhalv10000873m.g' => 'esa', 'Thhalv10004185m.g' => 'esa', 'Thhalv10006981m.g' => 'esa', 'Thhalv10007204m.g' => 'esa', 'Thhalv10011374m.g' => 'esa', 'Thhalv10013482m.g' => 'esa', 'Thhalv10017801m.g' => 'esa', 'Thhalv10024983m.g' => 'esa', 'TPR.G12072' => 'tpr', 'TPR.G15769' => 'tpr', 'TPR.G16504' => 'tpr', 'TPR.G16506' => 'tpr', 'TPR.G24345' => 'tpr', 'TPR.G26666' => 'tpr', 'TPR.G27320' => 'tpr', 'TPR.G31819' => 'tpr', 'TPR.G38879' => 'tpr', 'TPR.G39015' => 'tpr', 'TPR.G8819' => 'tpr', 'TWI09G0924' => 'twi', 'TWI12G0811' => 'twi', 'TWI12G1294' => 'twi', 'TWI31G0150' => 'twi', 'TWI36G1262' => 'twi', 'TWI38G1287' => 'twi', 'TWI38G1633' => 'twi', 'TWI38G1982' => 'twi', 'TWI39G0116' => 'twi', 'TWI60G1011' => 'twi', 'TWI63G0171' => 'twi', 'TWI73G0839' => 'twi', 'TWI79G1511' => 'twi', 'unitig_0.g915' => 'ugi', 'unitig_0.g916' => 'ugi', 'unitig_21.g20219' => 'ugi', 'unitig_21.g20416' => 'ugi', 'unitig_578.g16132' => 'ugi', 'unitig_578.g16718' => 'ugi', 'unitig_62.g23481' => 'ugi', 'unitig_744.g24535' => 'ugi', 'unitig_749.g13525' => 'ugi', 'vmacro01248' => 'vma', 'vmacro02290' => 'vma', 'vmacro10946' => 'vma', 'vmacro11865' => 'vma', 'vmacro12493' => 'vma', 'vmacro17322' => 'vma', 'vmacro21599' => 'vma', 'vmacro23041' => 'vma', 'VMungo0251G0004' => 'vmu', 'VMungo0251G2639' => 'vmu', 'VMungo0251G2967' => 'vmu', 'VMungo0540G0864' => 'vmu', 'VMungo0540G1569' => 'vmu', 'VMungo0647G0317' => 'vmu', 'VMungo0720G1373' => 'vmu', 'VMungo0720G1508' => 'vmu', 'VMungo1080G0485' => 'vmu', 'VMungo1215G3177' => 'vmu', 'Zm00001eb112600' => 'zma', 'Zm00001eb120220' => 'zma', 'Zm00001eb153240' => 'zma', 'Zm00001eb168880' => 'zma', 'Zm00001eb213920' => 'zma', 'Zm00001eb228280' => 'zma', 'Zm00001eb254580' => 'zma', 'Zm00001eb272180' => 'zma', 'Zm00001eb293190' => 'zma', 'Zm00001eb322930' => 'zma', 'Zm00001eb353360' => 'zma', 'Zm00001eb353390' => 'zma', 'Zm00001eb353430' => 'zma', 'Zm00001eb353440' => 'zma', 'Zm00001eb353780' => 'zma' ), 'gf_id' => 'HOM05D000499', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000499' ), 'data_identifier' => 'HOM05D000499', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000499', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1066', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p29780' => 'bna', 'A02p33180' => 'bna', 'A03p16470' => 'bna', 'A03p66010' => 'bna', 'A04p25970' => 'bna', 'A06p01270' => 'bna', 'A06p46080' => 'bna', 'A07p11400' => 'bna', 'A08p01840' => 'bna', 'A08p08230' => 'bna', 'A08p25740' => 'bna', 'A09p32070' => 'bna', 'A09p37830' => 'bna', 'A09p42840' => 'bna', 'A09p42850' => 'bna', 'Aa31LG10G2060' => 'aar', 'Aa31LG2G7410' => 'aar', 'Aa31LG6G10200' => 'aar', 'Aa31LG6G16680' => 'aar', 'Aa31LG6G8470' => 'aar', 'Aa31LG9G12730' => 'aar', 'Aa31LG9G13680' => 'aar', 'Aa31LG9G14920' => 'aar', 'Aa31LG9G6650' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4977' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5467' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3254' => 'aag', 'Actinidia02578' => 'ach', 'Actinidia07693' => 'ach', 'Actinidia08413' => 'ach', 'Actinidia08414' => 'ach', 'Actinidia15289' => 'ach', 'Actinidia19871' => 'ach', 'Actinidia21475' => 'ach', 'Actinidia22576' => 'ach', 'Actinidia28327' => 'ach', 'Actinidia32491' => 'ach', 'Actinidia39463' => 'ach', 'Actinidia39571' => 'ach', 'Ah.01g013750' => 'amhyb', 'Ah.01g023210' => 'amhyb', 'Ah.04g164850' => 'amhyb', 'Ah.05g178060' => 'amhyb', 'Ah.07g204270' => 'amhyb', 'Ah.07g208480' => 'amhyb', 'Ah.09g237410' => 'amhyb', 'Ah.14g089460' => 'amhyb', 'AL1G41790' => 'aly', 'AL1G49050' => 'aly', 'AL1G53810' => 'aly', 'AL1G61400' => 'aly', 'AL4G18580' => 'aly', 'AL5G12510' => 'aly', 'AL5G12540' => 'aly', 'AL6G43230' => 'aly', 'AL7G10370' => 'aly', 'AL7G19250' => 'aly', 'AL8G12240' => 'aly', 'AL8G18540' => 'aly', 'Aqoxy1G02409' => 'aox', 'Aqoxy2G03993' => 'aox', 'Aqoxy3G03357' => 'aox', 'Aqoxy4G00785' => 'aox', 'Aqoxy5G02598' => 'aox', 'Aqoxy6G00132' => 'aox', 'Aqoxy7G01776' => 'aox', 'Aqoxy7G02316' => 'aox', 'Aqoxy7G03973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.12AFKW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B8730' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27IQR1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3F75VG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3RE0GA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41TCQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.527VTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FIR39' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5W8UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DA38EV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ63HS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H1I32C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HC27T5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4M8AP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7N3CZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9UVDZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LS1NQA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT1D4B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SKC4TM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCFV76' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF9Q1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQWD9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1ZM88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WE07RT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YCK7VH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJE6Q6' => 'arhy', 'AT1G28240' => 'ath', 'AT1G34550' => 'ath', 'AT1G53040' => 'ath', 'AT2G02910' => 'ath', 'AT4G09630' => 'ath', 'AT4G38500' => 'ath', 'AT5G42660' => 'ath', 'AT5G46220' => 'ath', 'ATR0152G026' => 'atr', 'ATR0564G343' => 'atr', 'ATR0706G151' => 'atr', 'ATR0733G207' => 'atr', 'ATR0751G234' => 'atr', 'ATR0807G048' => 'atr', 'ATR1091G084' => 'atr', 'Atru.chr10.1229' => 'acertr', 'Atru.chr10.1230' => 'acertr', 'Atru.chr10.1874' => 'acertr', 'Atru.chr11.1808' => 'acertr', 'Atru.chr13.1795' => 'acertr', 'Atru.chr13.570' => 'acertr', 'Atru.chr2.2608' => 'acertr', 'Atru.chr2.2609' => 'acertr', 'Atru.chr5.3428' => 'acertr', 'Atru.chr8.1171' => 'acertr', 'AUR62004651' => 'cqu', 'AUR62008675' => 'cqu', 'AUR62010014' => 'cqu', 'AUR62013004' => 'cqu', 'AUR62014825' => 'cqu', 'AUR62015015' => 'cqu', 'AUR62015151' => 'cqu', 'AUR62017020' => 'cqu', 'AUR62019422' => 'cqu', 'AUR62023570' => 'cqu', 'AUR62025571' => 'cqu', 'AUR62029098' => 'cqu', 'AUR62033863' => 'cqu', 'AUR62034296' => 'cqu', 'AUR62040075' => 'cqu', 'BcaB02g07334' => 'bca', 'BcaB02g10575' => 'bca', 'BcaB03g12119' => 'bca', 'BcaB03g12120' => 'bca', 'BcaB03g13945' => 'bca', 'BcaB04g17123' => 'bca', 'BcaB04g17867' => 'bca', 'BcaB04g19839' => 'bca', 'BcaB07g30317' => 'bca', 'BcaB07g32432' => 'bca', 'BcaB07g33362' => 'bca', 'BcaB08g36611' => 'bca', 'BcaC01g00028' => 'bca', 'BcaC01g01356' => 'bca', 'BcaC01g02034' => 'bca', 'BcaC01g06051' => 'bca', 'BcaC03g16839' => 'bca', 'BcaC03g17176' => 'bca', 'BcaC05g26829' => 'bca', 'BcaC06g31490' => 'bca', 'BcaC06g35344' => 'bca', 'BcaC06g36570' => 'bca', 'BcaC07g37537' => 'bca', 'BcaC08g43491' => 'bca', 'BcaC08g43773' => 'bca', 'BcaNung00234' => 'bca', 'BcaNung01982' => 'bca', 'BcaNung03707' => 'bca', 'BcaNung06454' => 'bca', 'BolC2t10762H' => 'bol', 'BolC2t11191H' => 'bol', 'BolC3t14322H' => 'bol', 'BolC3t19747H' => 'bol', 'BolC3t21425H' => 'bol', 'BolC4t27800H' => 'bol', 'BolC5t31423H' => 'bol', 'BolC6t35951H' => 'bol', 'BolC6t36282H' => 'bol', 'BolC7t40678H' => 'bol', 'BolC7t40679H' => 'bol', 'BolC7t42222H' => 'bol', 'BolC7t43492H' => 'bol', 'BolC7t46785H' => 'bol', 'BolC8t47853H' => 'bol', 'BolC9t56805H' => 'bol', 'BraA02t08000Z' => 'bra', 'BraA02t08341Z' => 'bra', 'BraA03t10936Z' => 'bra', 'BraA03t15657Z' => 'bra', 'BraA04t18100Z' => 'bra', 'BraA05t20523Z' => 'bra', 'BraA06t23353Z' => 'bra', 'BraA06t27473Z' => 'bra', 'BraA06t27769Z' => 'bra', 'BraA07t28928Z' => 'bra', 'BraA08t32236Z' => 'bra', 'BraA08t32841Z' => 'bra', 'BraA08t34524Z' => 'bra', 'BraA09t38742Z' => 'bra', 'BraA09t39295Z' => 'bra', 'C02p47180' => 'bna', 'C02p50990' => 'bna', 'C03p19360' => 'bna', 'C03p74950' => 'bna', 'C03p91000' => 'bna', 'C04p63260' => 'bna', 'C05p27050' => 'bna', 'C06p08750' => 'bna', 'C06p11490' => 'bna', 'C07p02820' => 'bna', 'C07p17180' => 'bna', 'C07p29440' => 'bna', 'C07p63730' => 'bna', 'C09p39260' => 'bna', 'CAN.G1164.34' => 'can', 'CAN.G1164.39' => 'can', 'CAN.G1530.3' => 'can', 'CAN.G162.61' => 'can', 'CAN.G176.6' => 'can', 'CAN.G289.49' => 'can', 'CAN.G370.21' => 'can', 'CAN.G370.22' => 'can', 'CAN.G371.117' => 'can', 'CAN.G58.37' => 'can', 'CAN.G588.98' => 'can', 'CANSAT21G2266' => 'cansat', 'CANSAT25G2799' => 'cansat', 'CANSAT35G0862' => 'cansat', 'CANSAT35G1704' => 'cansat', 'CANSAT35G1760' => 'cansat', 'CANSAT56G3971' => 'cansat', 'CANSAT56G4116' => 'cansat', 'CANSAT80G1259' => 'cansat', 'CARHR027730' => 'chi', 'CARHR033880' => 'chi', 'CARHR043270' => 'chi', 'CARHR145330' => 'chi', 'CARHR145340' => 'chi', 'CARHR175570' => 'chi', 'CARHR181570' => 'chi', 'CARHR258470' => 'chi', 'CARHR260490' => 'chi', 'CARHR294220' => 'chi', 'Carub.0001s2668' => 'cru', 'Carub.0001s3257' => 'cru', 'Carub.0001s4220' => 'cru', 'Carub.0005s0179' => 'cru', 'Carub.0006s2807' => 'cru', 'Carub.0007s0039' => 'cru', 'Carub.0008s0169' => 'cru', 'Carub.0008s0636' => 'cru', 'Ca_00338_v3' => 'car', 'Ca_00542_v3' => 'car', 'Ca_01844_v3' => 'car', 'Ca_10611_v3' => 'car', 'Ca_13326_v3' => 'car', 'Ca_17944_v3' => 'car', 'Ca_18546_v3' => 'car', 'Ca_24219_v3' => 'car', 'Ca_29972_v3' => 'car', 'CBR_g3681' => 'cbr', 'CBR_g40021' => 'cbr', 'Cc01_g08140' => 'ccan', 'Cc02_g13410' => 'ccan', 'Cc02_g37480' => 'ccan', 'Cc05_g12030' => 'ccan', 'Cc09_g03370' => 'ccan', 'Cc09_g10300' => 'ccan', 'Cc10_g03530' => 'ccan', 'Cc10_g11380' => 'ccan', 'CDE01G0176' => 'cde', 'CDE02G0675' => 'cde', 'CDE02G0942' => 'cde', 'CDE02G1153' => 'cde', 'CDE02G4177' => 'cde', 'CDE04G2117' => 'cde', 'CDE04G2736' => 'cde', 'CDE08G1161' => 'cde', 'CDE09G1238' => 'cde', 'Cfa000467' => 'cfa', 'Cfa000947' => 'cfa', 'Cfa004969' => 'cfa', 'Cfa005284' => 'cfa', 'Cfa008993' => 'cfa', 'Cfa018187' => 'cfa', 'Cfa018454' => 'cfa', 'Cfa020585' => 'cfa', 'Ciclev10000424m.g' => 'ccl', 'Ciclev10003605m.g' => 'ccl', 'Ciclev10007828m.g' => 'ccl', 'Ciclev10014620m.g' => 'ccl', 'Ciclev10015169m.g' => 'ccl', 'Ciclev10018291m.g' => 'ccl', 'Ciclev10028256m.g' => 'ccl', 'Ciclev10033822m.g' => 'ccl', 'CiPaw.05G060300' => 'cil', 'CiPaw.05G085000' => 'cil', 'CiPaw.06G083700' => 'cil', 'CiPaw.06G120300' => 'cil', 'CiPaw.09G060500' => 'cil', 'CiPaw.09G123800' => 'cil', 'CiPaw.11G169700' => 'cil', 'CiPaw.12G118300' => 'cil', 'CiPaw.15G071000' => 'cil', 'CiPaw.15G081900' => 'cil', 'ClCG01G024610' => 'cla', 'ClCG03G006070' => 'cla', 'ClCG05G019250' => 'cla', 'ClCG09G009500' => 'cla', 'ClCG11G008200' => 'cla', 'ClCG11G018080' => 'cla', 'COL.COLO4_17373' => 'col', 'COL.COLO4_22994' => 'col', 'COL.COLO4_26389' => 'col', 'COL.COLO4_27170' => 'col', 'COL.COLO4_31074' => 'col', 'COL.COLO4_31465' => 'col', 'COL.COLO4_36438' => 'col', 'COL.COLO4_36439' => 'col', 'Cpa.g.c38781' => 'cpa', 'Cpa.g.sc128.12' => 'cpa', 'Cpa.g.sc166.7' => 'cpa', 'Cpa.g.sc166.8' => 'cpa', 'Cpa.g.sc20.111' => 'cpa', 'Cpa.g.sc27.31' => 'cpa', 'Cpa.g.sc64.36' => 'cpa', 'Cpa.g.sc64.37' => 'cpa', 'Cpa.g.sc66.49' => 'cpa', 'Cpa.g.sc80.64' => 'cpa', 'CsaV3_1G012320' => 'csa', 'CsaV3_2G008480' => 'csa', 'CsaV3_2G033450' => 'csa', 'CsaV3_3G044830' => 'csa', 'CsaV3_4G033710' => 'csa', 'CsaV3_6G051730' => 'csa', 'CsaV3_7G025350' => 'csa', 'CSS0001067' => 'camsi', 'CSS0005996' => 'camsi', 'CSS0006590' => 'camsi', 'CSS0009673' => 'camsi', 'CSS0010201' => 'camsi', 'CSS0010549' => 'camsi', 'CSS0011364' => 'camsi', 'CSS0014473' => 'camsi', 'CSS0014961' => 'camsi', 'CSS0020191' => 'camsi', 'CSS0021165' => 'camsi', 'CSS0022306' => 'camsi', 'CSS0030591' => 'camsi', 'CSS0030696' => 'camsi', 'CSS0032653' => 'camsi', 'CSS0037487' => 'camsi', 'CSS0041102' => 'camsi', 'CSS0041261' => 'camsi', 'CSS0046246' => 'camsi', 'CSS0049256' => 'camsi', 'DCAR_004075' => 'dca', 'DCAR_011538' => 'dca', 'DCAR_019553' => 'dca', 'DCAR_020952' => 'dca', 'DCAR_021739' => 'dca', 'DCAR_027407' => 'dca', 'DCAR_027913' => 'dca', 'DCAR_028066' => 'dca', 'Dinv05899' => 'din', 'Dinv07563' => 'din', 'Dinv08010' => 'din', 'Dinv14125' => 'din', 'Dinv20172' => 'din', 'Dinv30743' => 'din', 'Dinv31229' => 'din', 'Dinv34162' => 'din', 'Dinv36028' => 'din', 'Dinv39368' => 'din', 'Dinv40565' => 'din', 'Dinv41706' => 'din', 'Duzib052G0089' => 'dzi', 'Duzib116G0641' => 'dzi', 'Duzib132G0069' => 'dzi', 'Duzib132G1219' => 'dzi', 'Duzib147G0278' => 'dzi', 'Duzib160G0480' => 'dzi', 'Duzib170G0661' => 'dzi', 'Duzib177G0591' => 'dzi', 'Duzib187G1353' => 'dzi', 'Duzib192G0858' => 'dzi', 'Duzib192G0883' => 'dzi', 'Duzib213G0506' => 'dzi', 'Duzib235G0289' => 'dzi', 'Duzib251G0422' => 'dzi', 'ECA232G3898' => 'eca', 'ECA233G5950' => 'eca', 'ECA234G1699' => 'eca', 'ECA234G2421' => 'eca', 'ECA236G0426' => 'eca', 'ECA236G4331' => 'eca', 'ECA248G2573' => 'eca', 'EL10Ac1g00077' => 'bvu', 'EL10Ac1g01746' => 'bvu', 'EL10Ac2g03464' => 'bvu', 'EL10Ac4g08176' => 'bvu', 'EL10Ac7g17521' => 'bvu', 'EL10Ac8g20386' => 'bvu', 'EL10Ac9g21343' => 'bvu', 'EL10Ac9g22688' => 'bvu', 'Eucgr.B03434' => 'egr', 'Eucgr.D00618' => 'egr', 'Eucgr.E02395' => 'egr', 'Eucgr.F01129' => 'egr', 'Eucgr.F02622' => 'egr', 'Eucgr.F04207' => 'egr', 'FAN01G0570' => 'fan', 'FAN03G3351' => 'fan', 'FAN06G3702' => 'fan', 'FAN07G2149' => 'fan', 'FAN10G3758' => 'fan', 'FAN11G1170' => 'fan', 'FAN11G2050' => 'fan', 'FAN11G2724' => 'fan', 'FAN12G1700' => 'fan', 'FAN12G2028' => 'fan', 'FAN15G1160' => 'fan', 'FAN15G3063' => 'fan', 'FAN16G2540' => 'fan', 'FAN16G3077' => 'fan', 'FAN16G3624' => 'fan', 'FAN17G0221' => 'fan', 'FAN20G2492' => 'fan', 'FAN20G2905' => 'fan', 'FAN21G0548' => 'fan', 'FAN21G1300' => 'fan', 'FAN22G0077' => 'fan', 'FAN22G1315' => 'fan', 'FAN24G1280' => 'fan', 'FAN24G1445' => 'fan', 'FAN24G3527' => 'fan', 'FAN25G0464' => 'fan', 'FAN25G2885' => 'fan', 'FAN25G3270' => 'fan', 'FAN27G1101' => 'fan', 'FAN27G2846' => 'fan', 'FAN27G3524' => 'fan', 'FvH4_2g11770' => 'fve', 'FvH4_2g15630' => 'fve', 'FvH4_3g05570' => 'fve', 'FvH4_3g09110' => 'fve', 'FvH4_3g19940' => 'fve', 'FvH4_4g04821' => 'fve', 'FvH4_4g31480' => 'fve', 'FvH4_7g01740' => 'fve', 'Glyma.05G130400' => 'gma', 'Glyma.05G156400' => 'gma', 'Glyma.07G197000' => 'gma', 'Glyma.08G085151' => 'gma', 'Glyma.08G114500' => 'gma', 'Glyma.08G300400' => 'gma', 'Glyma.10G215800' => 'gma', 'Glyma.12G224400' => 'gma', 'Glyma.13G179300' => 'gma', 'Glyma.13G218151' => 'gma', 'Glyma.13G238800' => 'gma', 'Glyma.13G276900' => 'gma', 'Glyma.14G078200' => 'gma', 'Glyma.15G074500' => 'gma', 'Glyma.15G094100' => 'gma', 'Glyma.17G247200' => 'gma', 'Glyma.18G120100' => 'gma', 'Glyma.20G176000' => 'gma', 'Gohir.A01G063600' => 'ghi', 'Gohir.A01G170301' => 'ghi', 'Gohir.A02G060500' => 'ghi', 'Gohir.A05G133850' => 'ghi', 'Gohir.A05G161400' => 'ghi', 'Gohir.A06G012900' => 'ghi', 'Gohir.A06G035901' => 'ghi', 'Gohir.A06G127100' => 'ghi', 'Gohir.A06G210500' => 'ghi', 'Gohir.A08G008650' => 'ghi', 'Gohir.A09G072700' => 'ghi', 'Gohir.A09G088301' => 'ghi', 'Gohir.A10G040600' => 'ghi', 'Gohir.A12G036300' => 'ghi', 'Gohir.A12G143350' => 'ghi', 'Gohir.A12G165500' => 'ghi', 'Gohir.A13G145700' => 'ghi', 'Gohir.D01G050000' => 'ghi', 'Gohir.D01G051366' => 'ghi', 'Gohir.D01G161350' => 'ghi', 'Gohir.D02G065900' => 'ghi', 'Gohir.D05G164200' => 'ghi', 'Gohir.D05G355500' => 'ghi', 'Gohir.D06G010400' => 'ghi', 'Gohir.D06G111250' => 'ghi', 'Gohir.D06G132000' => 'ghi', 'Gohir.D06G210500' => 'ghi', 'Gohir.D07G165675' => 'ghi', 'Gohir.D08G062240' => 'ghi', 'Gohir.D08G086101' => 'ghi', 'Gohir.D08G138060' => 'ghi', 'Gohir.D09G072300' => 'ghi', 'Gohir.D10G041400' => 'ghi', 'Gohir.D11G191020' => 'ghi', 'Gohir.D11G212066' => 'ghi', 'Gohir.D12G036300' => 'ghi', 'Gohir.D12G168600' => 'ghi', 'Gohir.D13G150600' => 'ghi', 'Gorai.001G057300' => 'gra', 'Gorai.002G069900' => 'gra', 'Gorai.002G200000' => 'gra', 'Gorai.003G067600' => 'gra', 'Gorai.005G074800' => 'gra', 'Gorai.006G087300' => 'gra', 'Gorai.008G037500' => 'gra', 'Gorai.008G181400' => 'gra', 'Gorai.009G169400' => 'gra', 'Gorai.009G387900' => 'gra', 'Gorai.010G013300' => 'gra', 'Gorai.010G153800' => 'gra', 'Gorai.010G255800' => 'gra', 'Gorai.011G043700' => 'gra', 'Gorai.011G198900' => 'gra', 'Gorai.013G168400' => 'gra', 'GSVIVG01005212001' => 'vvi', 'GSVIVG01006163001' => 'vvi', 'GSVIVG01009625001' => 'vvi', 'GSVIVG01014338001' => 'vvi', 'GSVIVG01020005001' => 'vvi', 'GSVIVG01021450001' => 'vvi', 'GSVIVG01023975001' => 'vvi', 'GSVIVG01034490001' => 'vvi', 'HanXRQChr04g0112071' => 'han', 'HanXRQChr05g0131151' => 'han', 'HanXRQChr09g0262371' => 'han', 'HanXRQChr09g0268401' => 'han', 'HanXRQChr10g0279241' => 'han', 'HanXRQChr10g0297961' => 'han', 'HanXRQChr11g0326231' => 'han', 'HanXRQChr11g0328471' => 'han', 'HanXRQChr16g0507941' => 'han', 'HanXRQChr17g0560211' => 'han', 'Haze_02108' => 'cav', 'Haze_02428' => 'cav', 'Haze_05593' => 'cav', 'Haze_06448' => 'cav', 'Haze_09427' => 'cav', 'Haze_12022' => 'cav', 'Haze_17612' => 'cav', 'Haze_17928' => 'cav', 'Hma1.2p1_0032F.1_g019250' => 'hma', 'Hma1.2p1_0163F.1_g072690' => 'hma', 'Hma1.2p1_0265F.1_g106710' => 'hma', 'Hma1.2p1_0286F.1_g113970' => 'hma', 'Hma1.2p1_0363F.1_g136640' => 'hma', 'Hma1.2p1_0584F.1_g183470' => 'hma', 'Hma1.2p1_0885F.1_g232570' => 'hma', 'HPP92_006022' => 'vpl', 'HPP92_007320' => 'vpl', 'HPP92_011521' => 'vpl', 'HPP92_019387' => 'vpl', 'HPP92_024038' => 'vpl', 'Hund05891' => 'sun', 'Hund06450' => 'sun', 'Hund12053' => 'sun', 'Hund16800' => 'sun', 'Hund21222' => 'sun', 'Hund22896' => 'sun', 'Hund23746' => 'sun', 'Hund27083' => 'sun', 'Lalb_Chr02g0141831' => 'lal', 'Lalb_Chr02g0141841' => 'lal', 'Lalb_Chr05g0220411' => 'lal', 'Lalb_Chr06g0162081' => 'lal', 'Lalb_Chr09g0327651' => 'lal', 'Lalb_Chr13g0295051' => 'lal', 'Lalb_Chr15g0086801' => 'lal', 'Lalb_Chr16g0383781' => 'lal', 'Lalb_Chr16g0383791' => 'lal', 'Lalb_Chr18g0055441' => 'lal', 'Lalb_Chr18g0059611' => 'lal', 'Lalb_Chr20g0109661' => 'lal', 'Lalb_Chr20g0109831' => 'lal', 'Lalb_Chr20g0121871' => 'lal', 'Lalb_Chr22g0355361' => 'lal', 'Lalb_Chr25g0286371' => 'lal', 'Lj1A1187G43' => 'lonja', 'Lj1A1205T50' => 'lonja', 'Lj1A800G33' => 'lonja', 'Lj1C1187T7' => 'lonja', 'Lj1C843T11' => 'lonja', 'Lj1g0010940' => 'lja', 'Lj2A288T69' => 'lonja', 'Lj3g0024276' => 'lja', 'Lj4A47T76' => 'lonja', 'Lj4g0005805' => 'lja', 'Lj4g0006097' => 'lja', 'Lj4g0008528' => 'lja', 'Lj4g0024907' => 'lja', 'Lj5g0012472' => 'lja', 'Lj5g0018648' => 'lja', 'Lj6C789G1' => 'lonja', 'Lj6g0004000' => 'lja', 'Lj7A292G67' => 'lonja', 'Lj7A292T64' => 'lonja', 'Lj9A400T58' => 'lonja', 'Lsat_1_v5_gn_1_126181' => 'lsa', 'Lsat_1_v5_gn_4_123041' => 'lsa', 'Lsat_1_v5_gn_4_133620' => 'lsa', 'Lsat_1_v5_gn_4_53221' => 'lsa', 'Lsat_1_v5_gn_4_71961' => 'lsa', 'Lsat_1_v5_gn_7_105241' => 'lsa', 'Lsat_1_v5_gn_7_21361' => 'lsa', 'Lsat_1_v5_gn_7_28860' => 'lsa', 'Lsat_1_v5_gn_7_31260' => 'lsa', 'Lsat_1_v5_gn_8_52801' => 'lsa', 'Manes.02G191400' => 'mes', 'Manes.03G110100' => 'mes', 'Manes.04G071100' => 'mes', 'Manes.05G100500' => 'mes', 'Manes.05G164700' => 'mes', 'Manes.15G087000' => 'mes', 'Manes.15G121500' => 'mes', 'Manes.16G028300' => 'mes', 'Manes.17G046100' => 'mes', 'Manes.17G069800' => 'mes', 'Manes.18G100500' => 'mes', 'Mapoly0002s0109' => 'mpo', 'Mapoly0024s0007' => 'mpo', 'Mapoly0089s0032' => 'mpo', 'MBI04_g42241_MAGBIO' => 'mbi', 'MBI05_g11988_MAGBIO' => 'mbi', 'MBI05_g35452_MAGBIO' => 'mbi', 'MBI07_g30179_MAGBIO' => 'mbi', 'MBI07_g35859_MAGBIO' => 'mbi', 'MBI07_g35860_MAGBIO' => 'mbi', 'MBI07_g37166_MAGBIO' => 'mbi', 'MBI08_g18172_MAGBIO' => 'mbi', 'MBI09_g08441_MAGBIO' => 'mbi', 'MBI13_g01676_MAGBIO' => 'mbi', 'MBI14_g42955_MAGBIO' => 'mbi', 'MBI16_g13161_MAGBIO' => 'mbi', 'MBI17_g27204_MAGBIO' => 'mbi', 'MBI19_g21595_MAGBIO' => 'mbi', 'MD00G1148400' => 'mdo', 'MD02G1301200' => 'mdo', 'MD03G1227800' => 'mdo', 'MD05G1041100' => 'mdo', 'MD05G1124800' => 'mdo', 'MD05G1284000' => 'mdo', 'MD05G1338800' => 'mdo', 'MD05G1338900' => 'mdo', 'MD07G1022800' => 'mdo', 'MD10G1047500' => 'mdo', 'MD10G1127500' => 'mdo', 'MD10G1262300' => 'mdo', 'MD10G1293800' => 'mdo', 'MD16G1074300' => 'mdo', 'Medtr1g021670' => 'mtr', 'Medtr1g096320' => 'mtr', 'Medtr2g013690' => 'mtr', 'Medtr2g019450' => 'mtr', 'Medtr2g085170' => 'mtr', 'Medtr4g088785' => 'mtr', 'Medtr8g055930' => 'mtr', 'Medtr8g085850' => 'mtr', 'MELO3C002605.2' => 'cme', 'MELO3C003891.2' => 'cme', 'MELO3C004012.2' => 'cme', 'MELO3C007134.2' => 'cme', 'MELO3C008118.2' => 'cme', 'MELO3C016700.2' => 'cme', 'MELO3C024127.2' => 'cme', 'MELO3C033361.2' => 'cme', 'MELO3C033362.2' => 'cme', 'Migut.C00430' => 'egut', 'Migut.C01246' => 'egut', 'Migut.E00101' => 'egut', 'Migut.H01486' => 'egut', 'Migut.H01939' => 'egut', 'Migut.K00360' => 'egut', 'Migut.M00910' => 'egut', 'Migut.M01139' => 'egut', 'Migut.N02677' => 'egut', 'MSTRG.13252' => 'ama', 'MSTRG.14701' => 'ama', 'MSTRG.1521' => 'ama', 'MSTRG.15884' => 'ama', 'MSTRG.16242' => 'ama', 'MSTRG.22285' => 'ama', 'MSTRG.22444' => 'ama', 'MSTRG.2349' => 'ama', 'MSTRG.26308' => 'ama', 'MSTRG.28296' => 'ama', 'MSTRG.9895' => 'ama', 'Nitab4.5_0000110g0060' => 'nta', 'Nitab4.5_0000420g0130' => 'nta', 'Nitab4.5_0000422g0030' => 'nta', 'Nitab4.5_0000560g0180' => 'nta', 'Nitab4.5_0000703g0100' => 'nta', 'Nitab4.5_0000786g0200' => 'nta', 'Nitab4.5_0001336g0020' => 'nta', 'Nitab4.5_0001796g0030' => 'nta', 'Nitab4.5_0003348g0060' => 'nta', 'Nitab4.5_0003698g0040' => 'nta', 'Nitab4.5_0003942g0090' => 'nta', 'Nitab4.5_0004775g0070' => 'nta', 'Nitab4.5_0004864g0030' => 'nta', 'Nitab4.5_0005615g0020' => 'nta', 'Nitab4.5_0009288g0030' => 'nta', 'Nitab4.5_0009341g0010' => 'nta', 'Nitab4.5_0009535g0010' => 'nta', 'Nn1g03995' => 'nnu', 'Nn1g04100' => 'nnu', 'Nn1g06530' => 'nnu', 'Nn3g16404' => 'nnu', 'Nn3g17212' => 'nnu', 'Nn3g20776' => 'nnu', 'Nn3g21923' => 'nnu', 'Nn5g27737' => 'nnu', 'Nn5g29461' => 'nnu', 'Nn7g38355' => 'nnu', 'Nn8g39873' => 'nnu', 'Oeu000548.2' => 'oeu', 'Oeu004672.1' => 'oeu', 'Oeu015605.2' => 'oeu', 'Oeu016092.1' => 'oeu', 'Oeu017879.3' => 'oeu', 'Oeu024910.1' => 'oeu', 'Oeu028965.1' => 'oeu', 'Oeu031269.1' => 'oeu', 'Oeu031270.1' => 'oeu', 'Oeu032535.1' => 'oeu', 'Oeu034151.1' => 'oeu', 'Oeu034152.1' => 'oeu', 'Oeu034588.2' => 'oeu', 'Oeu050846.1' => 'oeu', 'Oeu050849.2' => 'oeu', 'Oeu051063.2' => 'oeu', 'Oeu052368.1' => 'oeu', 'Oeu052370.1' => 'oeu', 'Os01g0210400' => 'osa', 'Os01g0304300' => 'osa', 'Os01g0749100' => 'osa', 'Os02g0745800' => 'osa', 'Os03g0769050' => 'osa', 'Os05g0531500' => 'osa', 'Os06g0724300' => 'osa', 'Os11g0198100' => 'osa', 'Peaxi162Scf00069g01425' => 'pax', 'Peaxi162Scf00280g00811' => 'pax', 'Peaxi162Scf00310g00615' => 'pax', 'Peaxi162Scf00362g00542' => 'pax', 'Peaxi162Scf00461g00310' => 'pax', 'Peaxi162Scf00530g00118' => 'pax', 'Peaxi162Scf00541g00057' => 'pax', 'Peaxi162Scf00661g00017' => 'pax', 'Peaxi162Scf00926g00027' => 'pax', 'Peaxi162Scf01064g00263' => 'pax', 'Peaxi162Scf01211g00135' => 'pax', 'PGR004G2336' => 'pgr', 'PGR042G0327' => 'pgr', 'PGR042G1957' => 'pgr', 'PGR042G2003' => 'pgr', 'PGR042G3929' => 'pgr', 'PGR083G1137' => 'pgr', 'PGR083G1364' => 'pgr', 'PGSC0003DMG400003381' => 'stu', 'PGSC0003DMG400003417' => 'stu', 'PGSC0003DMG400008981' => 'stu', 'PGSC0003DMG400012417' => 'stu', 'PGSC0003DMG400012823' => 'stu', 'PGSC0003DMG400016885' => 'stu', 'PGSC0003DMG400022812' => 'stu', 'PGSC0003DMG400029726' => 'stu', 'PGSC0003DMG401009243' => 'stu', 'PGSC0003DMG401031505' => 'stu', 'PGSC0003DMG402031505' => 'stu', 'Phvul.001G017600' => 'pvu', 'Phvul.002G193500' => 'pvu', 'Phvul.002G228900' => 'pvu', 'Phvul.002G236800' => 'pvu', 'Phvul.003G049500' => 'pvu', 'Phvul.005G072000' => 'pvu', 'Phvul.006G164800' => 'pvu', 'Phvul.006G185100' => 'pvu', 'Phvul.007G090000' => 'pvu', 'Potri.001G399800' => 'ptr', 'Potri.002G149900' => 'ptr', 'Potri.004G044100' => 'ptr', 'Potri.004G177600' => 'ptr', 'Potri.009G138000' => 'ptr', 'Potri.010G094000' => 'ptr', 'Potri.011G053000' => 'ptr', 'Potri.011G119300' => 'ptr', 'Potri.013G113700' => 'ptr', 'Potri.018G107800' => 'ptr', 'Potri.019G084100' => 'ptr', 'Pp3c14_23720' => 'ppa', 'Pp3c16_6340' => 'ppa', 'Pp3c23_13420' => 'ppa', 'Pp3c24_2740' => 'ppa', 'Pp3c25_860' => 'ppa', 'Pp3c8_21750' => 'ppa', 'Prupe.1G273000' => 'ppe', 'Prupe.1G273700' => 'ppe', 'Prupe.1G274100' => 'ppe', 'Prupe.2G023300' => 'ppe', 'Prupe.4G048000' => 'ppe', 'Prupe.4G080400' => 'ppe', 'Prupe.4G181200' => 'ppe', 'Prupe.8G056900' => 'ppe', 'Prupe.8G168700' => 'ppe', 'Psat1g189080' => 'psa', 'Psat1g204760' => 'psa', 'Psat4g175560' => 'psa', 'Psat4g177720' => 'psa', 'Psat5g244240' => 'psa', 'Psat6g010720' => 'psa', 'Psat6g187200' => 'psa', 'Psat7g072040' => 'psa', 'PSO017G3501' => 'pso', 'PSO063G2148' => 'pso', 'PSO063G5608' => 'pso', 'PSO210G6392' => 'pso', 'PSO541G2319' => 'pso', 'PSO541G2836' => 'pso', 'PSO541G4012' => 'pso', 'PSO541G6253' => 'pso', 'PSO675G0580' => 'pso', 'PSO675G0856' => 'pso', 'PSO675G5635' => 'pso', 'PSO675G9157' => 'pso', 'PSO832G1660' => 'pso', 'PSO832G1969' => 'pso', 'QL02p007186' => 'qlo', 'QL02p033904' => 'qlo', 'QL03p064391' => 'qlo', 'QL05p040593' => 'qlo', 'QL05p058242' => 'qlo', 'QL08p021825' => 'qlo', 'QL11p004981' => 'qlo', 'RcHm_v2.0_Chr1g0318301' => 'rch', 'RcHm_v2.0_Chr4g0418501' => 'rch', 'RcHm_v2.0_Chr4g0439971' => 'rch', 'RcHm_v2.0_Chr5g0008541' => 'rch', 'RcHm_v2.0_Chr5g0014101' => 'rch', 'RcHm_v2.0_Chr5g0014131' => 'rch', 'RcHm_v2.0_Chr5g0033621' => 'rch', 'RcHm_v2.0_Chr6g0272041' => 'rch', 'RcHm_v2.0_Chr6g0278831' => 'rch', 'Rhsim02G0130400' => 'rsi', 'Rhsim02G0171100' => 'rsi', 'Rhsim05G0053000' => 'rsi', 'Rhsim05G0053100' => 'rsi', 'Rhsim06G0096500' => 'rsi', 'Rhsim06G0096600' => 'rsi', 'Rhsim06G0199100' => 'rsi', 'Rhsim12G0062300' => 'rsi', 'Rhsim12G0062800' => 'rsi', 'Sabra02G0118600' => 'sbr', 'Sabra04G0027300' => 'sbr', 'Sabra04G0119500' => 'sbr', 'Sabra08G0112500' => 'sbr', 'Sabra11G0036800' => 'sbr', 'Sabra11G0103800' => 'sbr', 'Sabra13G0096300' => 'sbr', 'Sabra16G0262300' => 'sbr', 'Sabra18G0091700' => 'sbr', 'Sabra19G0095400' => 'sbr', 'SalBow6G3080' => 'sbo', 'SalBow7G1157' => 'sbo', 'SalBow7G2123' => 'sbo', 'SalBow7G2285' => 'sbo', 'SalBow7G3537' => 'sbo', 'SalBow8G2947' => 'sbo', 'SalBow8G4463' => 'sbo', 'SalBow8G5466' => 'sbo', 'Sc01g0001750' => 'sci', 'Sc02g0006640' => 'sci', 'Sc02g0006670' => 'sci', 'Sc04g0008220' => 'sci', 'Sc05g0006190' => 'sci', 'Sc08g0002760' => 'sci', 'Sc17g0006170' => 'sci', 'Sc22g0002050' => 'sci', 'Sc23g0001190' => 'sci', 'Sc24g0000980' => 'sci', 'Sed0006245' => 'sed', 'Sed0007543' => 'sed', 'Sed0009411' => 'sed', 'Sed0010765' => 'sed', 'Sed0012944' => 'sed', 'Sed0014682' => 'sed', 'Sed0016174' => 'sed', 'Sed0016796' => 'sed', 'Sed0020317' => 'sed', 'Sed0021467' => 'sed', 'SEGI_01316' => 'sgi', 'SEGI_03374' => 'sgi', 'SEGI_16265' => 'sgi', 'SEGI_18569' => 'sgi', 'SEGI_20351' => 'sgi', 'SEGI_26395' => 'sgi', 'SEGI_29469' => 'sgi', 'SEGI_34771' => 'sgi', 'SEGI_36769' => 'sgi', 'SEGI_37139' => 'sgi', 'SGA_v2.0_scaffold100G29687' => 'sas', 'SGA_v2.0_scaffold118G32472' => 'sas', 'SGA_v2.0_scaffold14G07051' => 'sas', 'SGA_v2.0_scaffold183G39845' => 'sas', 'SGA_v2.0_scaffold1G00174' => 'sas', 'SGA_v2.0_scaffold22G09714' => 'sas', 'SGA_v2.0_scaffold333G48992' => 'sas', 'SGA_v2.0_scaffold46G17491' => 'sas', 'SGA_v2.0_scaffold49G18294' => 'sas', 'SGA_v2.0_scaffold63G21658' => 'sas', 'SHI01741' => 'shi', 'SHI05771' => 'shi', 'SHI18077' => 'shi', 'SHI20525' => 'shi', 'SHI20527' => 'shi', 'SHI20528' => 'shi', 'SMO172G0185' => 'smo', 'SMO198G0020' => 'smo', 'SMO351G0006' => 'smo', 'SMO356G0118' => 'smo', 'SMO358G0296' => 'smo', 'SMO367G0079' => 'smo', 'SMO367G1277' => 'smo', 'Solyc01g014220.3' => 'sly', 'Solyc01g111770.2' => 'sly', 'Solyc02g078180.3' => 'sly', 'Solyc03g006430.3' => 'sly', 'Solyc03g006456.1' => 'sly', 'Solyc03g079860.2' => 'sly', 'Solyc04g079770.3' => 'sly', 'Solyc05g007430.4' => 'sly', 'Solyc07g063150.3' => 'sly', 'Solyc08g016620.3' => 'sly', 'Solyc09g057590.3' => 'sly', 'Solyc09g057600.1' => 'sly', 'Solyc10g009050.3' => 'sly', 'Solyc11g017420.2' => 'sly', 'Sopen01g053810' => 'spe', 'Sopen02g023040' => 'spe', 'Sopen03g002440' => 'spe', 'Sopen04g033350' => 'spe', 'Sopen05g003310' => 'spe', 'Sopen07g004050' => 'spe', 'Sopen07g031340' => 'spe', 'Sopen08g006990' => 'spe', 'Sopen10g004830' => 'spe', 'Sopen11g009370' => 'spe', 'Sp1g24450' => 'spa', 'Sp1g29670' => 'spa', 'Sp1g39600' => 'spa', 'Sp2g11080' => 'spa', 'Sp2g13970' => 'spa', 'Sp4g16130' => 'spa', 'Sp6g13080' => 'spa', 'Sp7g37270' => 'spa', 'TAR371G0065' => 'tar', 'TAR376G0340' => 'tar', 'TAR376G0435' => 'tar', 'TAR381G0002' => 'tar', 'TAR381G1236' => 'tar', 'TAR624G0055' => 'tar', 'TAR624G0324' => 'tar', 'TAR624G0696' => 'tar', 'TAR624G0906' => 'tar', 'TAR625G0107' => 'tar', 'TAR626G0015' => 'tar', 'TAR626G1356' => 'tar', 'TAR627G0888' => 'tar', 'TAR628G0399' => 'tar', 'TAR628G1327' => 'tar', 'TAR629G2831' => 'tar', 'TAR629G2874' => 'tar', 'TAR633G1432' => 'tar', 'TAR633G2771' => 'tar', 'THA.LOC104803394' => 'tha', 'THA.LOC104805153' => 'tha', 'THA.LOC104806784' => 'tha', 'THA.LOC104810473' => 'tha', 'THA.LOC104813100' => 'tha', 'THA.LOC104814215' => 'tha', 'THA.LOC104815554' => 'tha', 'THA.LOC104820544' => 'tha', 'THA.LOC104824754' => 'tha', 'THA.LOC104827717' => 'tha', 'Thecc.02G031400' => 'tca', 'Thecc.02G055900' => 'tca', 'Thecc.02G350800' => 'tca', 'Thecc.06G150900' => 'tca', 'Thecc.06G186600' => 'tca', 'Thecc.07G089600' => 'tca', 'Thecc.08G020400' => 'tca', 'Thecc.08G182100' => 'tca', 'Thhalv10000873m.g' => 'esa', 'Thhalv10004185m.g' => 'esa', 'Thhalv10006981m.g' => 'esa', 'Thhalv10007204m.g' => 'esa', 'Thhalv10011374m.g' => 'esa', 'Thhalv10013482m.g' => 'esa', 'Thhalv10017801m.g' => 'esa', 'Thhalv10024983m.g' => 'esa', 'TPR.G12072' => 'tpr', 'TPR.G15769' => 'tpr', 'TPR.G16504' => 'tpr', 'TPR.G16506' => 'tpr', 'TPR.G24345' => 'tpr', 'TPR.G26666' => 'tpr', 'TPR.G27320' => 'tpr', 'TPR.G31819' => 'tpr', 'TPR.G38879' => 'tpr', 'TPR.G39015' => 'tpr', 'TPR.G8819' => 'tpr', 'TWI09G0924' => 'twi', 'TWI12G0811' => 'twi', 'TWI12G1294' => 'twi', 'TWI31G0150' => 'twi', 'TWI36G1262' => 'twi', 'TWI38G1287' => 'twi', 'TWI38G1633' => 'twi', 'TWI38G1982' => 'twi', 'TWI39G0116' => 'twi', 'TWI60G1011' => 'twi', 'TWI63G0171' => 'twi', 'TWI73G0839' => 'twi', 'TWI79G1511' => 'twi', 'unitig_0.g915' => 'ugi', 'unitig_0.g916' => 'ugi', 'unitig_21.g20219' => 'ugi', 'unitig_21.g20416' => 'ugi', 'unitig_578.g16132' => 'ugi', 'unitig_578.g16718' => 'ugi', 'unitig_62.g23481' => 'ugi', 'unitig_744.g24535' => 'ugi', 'unitig_749.g13525' => 'ugi', 'vmacro01248' => 'vma', 'vmacro02290' => 'vma', 'vmacro10946' => 'vma', 'vmacro11865' => 'vma', 'vmacro12493' => 'vma', 'vmacro17322' => 'vma', 'vmacro21599' => 'vma', 'vmacro23041' => 'vma', 'VMungo0251G0004' => 'vmu', 'VMungo0251G2639' => 'vmu', 'VMungo0251G2967' => 'vmu', 'VMungo0540G0864' => 'vmu', 'VMungo0540G1569' => 'vmu', 'VMungo0647G0317' => 'vmu', 'VMungo0720G1373' => 'vmu', 'VMungo0720G1508' => 'vmu', 'VMungo1080G0485' => 'vmu', 'VMungo1215G3177' => 'vmu', 'Zm00001eb112600' => 'zma', 'Zm00001eb120220' => 'zma', 'Zm00001eb153240' => 'zma', 'Zm00001eb168880' => 'zma', 'Zm00001eb213920' => 'zma', 'Zm00001eb228280' => 'zma', 'Zm00001eb254580' => 'zma', 'Zm00001eb272180' => 'zma', 'Zm00001eb293190' => 'zma', 'Zm00001eb322930' => 'zma', 'Zm00001eb353360' => 'zma', 'Zm00001eb353390' => 'zma', 'Zm00001eb353430' => 'zma', 'Zm00001eb353440' => 'zma', 'Zm00001eb353780' => 'zma' ) $gf_id = 'HOM05D000499' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000499' ) $data_identifier = 'HOM05D000499' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 29, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 12, 'amhyb' => (int) 8, 'aly' => (int) 12, 'aox' => (int) 9, 'arhy' => (int) 26, 'ath' => (int) 8, 'atr' => (int) 7, 'acertr' => (int) 10, 'cqu' => (int) 15, 'bca' => (int) 29, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 11, 'cansat' => (int) 8, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 9, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 8, 'cpa' => (int) 10, 'csa' => (int) 7, 'camsi' => (int) 20, 'dca' => (int) 8, 'din' => (int) 12, 'dzi' => (int) 14, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 6, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 38, 'gra' => (int) 16, 'vvi' => (int) 8, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 5, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 11, 'lja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 11, 'mpo' => (int) 3, 'mbi' => (int) 14, 'mdo' => (int) 14, 'mtr' => (int) 8, 'cme' => (int) 9, 'egut' => (int) 9, 'ama' => (int) 11, 'nta' => (int) 17, 'nnu' => (int) 11, 'oeu' => (int) 18, 'osa' => (int) 8, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 6, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 9, 'rsi' => (int) 9, 'sbr' => (int) 10, 'sbo' => (int) 8, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 10, 'sas' => (int) 10, 'shi' => (int) 6, 'smo' => (int) 7, 'sly' => (int) 14, 'spe' => (int) 10, 'spa' => (int) 8, 'tar' => (int) 19, 'tha' => (int) 10, 'tca' => (int) 8, 'esa' => (int) 8, 'tpr' => (int) 11, 'twi' => (int) 13, 'ugi' => (int) 9, 'vma' => (int) 8, 'vmu' => (int) 10, 'zma' => (int) 15 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb353780' $species_info = array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ) $local_species = 'ptr' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000499', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1066', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p29780' => 'bna', 'A02p33180' => 'bna', 'A03p16470' => 'bna', 'A03p66010' => 'bna', 'A04p25970' => 'bna', 'A06p01270' => 'bna', 'A06p46080' => 'bna', 'A07p11400' => 'bna', 'A08p01840' => 'bna', 'A08p08230' => 'bna', 'A08p25740' => 'bna', 'A09p32070' => 'bna', 'A09p37830' => 'bna', 'A09p42840' => 'bna', 'A09p42850' => 'bna', 'Aa31LG10G2060' => 'aar', 'Aa31LG2G7410' => 'aar', 'Aa31LG6G10200' => 'aar', 'Aa31LG6G16680' => 'aar', 'Aa31LG6G8470' => 'aar', 'Aa31LG9G12730' => 'aar', 'Aa31LG9G13680' => 'aar', 'Aa31LG9G14920' => 'aar', 'Aa31LG9G6650' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4977' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5467' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3254' => 'aag', 'Actinidia02578' => 'ach', 'Actinidia07693' => 'ach', 'Actinidia08413' => 'ach', 'Actinidia08414' => 'ach', 'Actinidia15289' => 'ach', 'Actinidia19871' => 'ach', 'Actinidia21475' => 'ach', 'Actinidia22576' => 'ach', 'Actinidia28327' => 'ach', 'Actinidia32491' => 'ach', 'Actinidia39463' => 'ach', 'Actinidia39571' => 'ach', 'Ah.01g013750' => 'amhyb', 'Ah.01g023210' => 'amhyb', 'Ah.04g164850' => 'amhyb', 'Ah.05g178060' => 'amhyb', 'Ah.07g204270' => 'amhyb', 'Ah.07g208480' => 'amhyb', 'Ah.09g237410' => 'amhyb', 'Ah.14g089460' => 'amhyb', 'AL1G41790' => 'aly', 'AL1G49050' => 'aly', 'AL1G53810' => 'aly', 'AL1G61400' => 'aly', 'AL4G18580' => 'aly', 'AL5G12510' => 'aly', 'AL5G12540' => 'aly', 'AL6G43230' => 'aly', 'AL7G10370' => 'aly', 'AL7G19250' => 'aly', 'AL8G12240' => 'aly', 'AL8G18540' => 'aly', 'Aqoxy1G02409' => 'aox', 'Aqoxy2G03993' => 'aox', 'Aqoxy3G03357' => 'aox', 'Aqoxy4G00785' => 'aox', 'Aqoxy5G02598' => 'aox', 'Aqoxy6G00132' => 'aox', 'Aqoxy7G01776' => 'aox', 'Aqoxy7G02316' => 'aox', 'Aqoxy7G03973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.12AFKW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B8730' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27IQR1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3F75VG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3RE0GA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41TCQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.527VTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FIR39' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5W8UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DA38EV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ63HS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H1I32C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HC27T5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4M8AP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7N3CZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9UVDZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LS1NQA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT1D4B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SKC4TM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCFV76' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF9Q1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQWD9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1ZM88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WE07RT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YCK7VH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJE6Q6' => 'arhy', 'AT1G28240' => 'ath', 'AT1G34550' => 'ath', 'AT1G53040' => 'ath', 'AT2G02910' => 'ath', 'AT4G09630' => 'ath', 'AT4G38500' => 'ath', 'AT5G42660' => 'ath', 'AT5G46220' => 'ath', 'ATR0152G026' => 'atr', 'ATR0564G343' => 'atr', 'ATR0706G151' => 'atr', 'ATR0733G207' => 'atr', 'ATR0751G234' => 'atr', 'ATR0807G048' => 'atr', 'ATR1091G084' => 'atr', 'Atru.chr10.1229' => 'acertr', 'Atru.chr10.1230' => 'acertr', 'Atru.chr10.1874' => 'acertr', 'Atru.chr11.1808' => 'acertr', 'Atru.chr13.1795' => 'acertr', 'Atru.chr13.570' => 'acertr', 'Atru.chr2.2608' => 'acertr', 'Atru.chr2.2609' => 'acertr', 'Atru.chr5.3428' => 'acertr', 'Atru.chr8.1171' => 'acertr', 'AUR62004651' => 'cqu', 'AUR62008675' => 'cqu', 'AUR62010014' => 'cqu', 'AUR62013004' => 'cqu', 'AUR62014825' => 'cqu', 'AUR62015015' => 'cqu', 'AUR62015151' => 'cqu', 'AUR62017020' => 'cqu', 'AUR62019422' => 'cqu', 'AUR62023570' => 'cqu', 'AUR62025571' => 'cqu', 'AUR62029098' => 'cqu', 'AUR62033863' => 'cqu', 'AUR62034296' => 'cqu', 'AUR62040075' => 'cqu', 'BcaB02g07334' => 'bca', 'BcaB02g10575' => 'bca', 'BcaB03g12119' => 'bca', 'BcaB03g12120' => 'bca', 'BcaB03g13945' => 'bca', 'BcaB04g17123' => 'bca', 'BcaB04g17867' => 'bca', 'BcaB04g19839' => 'bca', 'BcaB07g30317' => 'bca', 'BcaB07g32432' => 'bca', 'BcaB07g33362' => 'bca', 'BcaB08g36611' => 'bca', 'BcaC01g00028' => 'bca', 'BcaC01g01356' => 'bca', 'BcaC01g02034' => 'bca', 'BcaC01g06051' => 'bca', 'BcaC03g16839' => 'bca', 'BcaC03g17176' => 'bca', 'BcaC05g26829' => 'bca', 'BcaC06g31490' => 'bca', 'BcaC06g35344' => 'bca', 'BcaC06g36570' => 'bca', 'BcaC07g37537' => 'bca', 'BcaC08g43491' => 'bca', 'BcaC08g43773' => 'bca', 'BcaNung00234' => 'bca', 'BcaNung01982' => 'bca', 'BcaNung03707' => 'bca', 'BcaNung06454' => 'bca', 'BolC2t10762H' => 'bol', 'BolC2t11191H' => 'bol', 'BolC3t14322H' => 'bol', 'BolC3t19747H' => 'bol', 'BolC3t21425H' => 'bol', 'BolC4t27800H' => 'bol', 'BolC5t31423H' => 'bol', 'BolC6t35951H' => 'bol', 'BolC6t36282H' => 'bol', 'BolC7t40678H' => 'bol', 'BolC7t40679H' => 'bol', 'BolC7t42222H' => 'bol', 'BolC7t43492H' => 'bol', 'BolC7t46785H' => 'bol', 'BolC8t47853H' => 'bol', 'BolC9t56805H' => 'bol', 'BraA02t08000Z' => 'bra', 'BraA02t08341Z' => 'bra', 'BraA03t10936Z' => 'bra', 'BraA03t15657Z' => 'bra', 'BraA04t18100Z' => 'bra', 'BraA05t20523Z' => 'bra', 'BraA06t23353Z' => 'bra', 'BraA06t27473Z' => 'bra', 'BraA06t27769Z' => 'bra', 'BraA07t28928Z' => 'bra', 'BraA08t32236Z' => 'bra', 'BraA08t32841Z' => 'bra', 'BraA08t34524Z' => 'bra', 'BraA09t38742Z' => 'bra', 'BraA09t39295Z' => 'bra', 'C02p47180' => 'bna', 'C02p50990' => 'bna', 'C03p19360' => 'bna', 'C03p74950' => 'bna', 'C03p91000' => 'bna', 'C04p63260' => 'bna', 'C05p27050' => 'bna', 'C06p08750' => 'bna', 'C06p11490' => 'bna', 'C07p02820' => 'bna', 'C07p17180' => 'bna', 'C07p29440' => 'bna', 'C07p63730' => 'bna', 'C09p39260' => 'bna', 'CAN.G1164.34' => 'can', 'CAN.G1164.39' => 'can', 'CAN.G1530.3' => 'can', 'CAN.G162.61' => 'can', 'CAN.G176.6' => 'can', 'CAN.G289.49' => 'can', 'CAN.G370.21' => 'can', 'CAN.G370.22' => 'can', 'CAN.G371.117' => 'can', 'CAN.G58.37' => 'can', 'CAN.G588.98' => 'can', 'CANSAT21G2266' => 'cansat', 'CANSAT25G2799' => 'cansat', 'CANSAT35G0862' => 'cansat', 'CANSAT35G1704' => 'cansat', 'CANSAT35G1760' => 'cansat', 'CANSAT56G3971' => 'cansat', 'CANSAT56G4116' => 'cansat', 'CANSAT80G1259' => 'cansat', 'CARHR027730' => 'chi', 'CARHR033880' => 'chi', 'CARHR043270' => 'chi', 'CARHR145330' => 'chi', 'CARHR145340' => 'chi', 'CARHR175570' => 'chi', 'CARHR181570' => 'chi', 'CARHR258470' => 'chi', 'CARHR260490' => 'chi', 'CARHR294220' => 'chi', 'Carub.0001s2668' => 'cru', 'Carub.0001s3257' => 'cru', 'Carub.0001s4220' => 'cru', 'Carub.0005s0179' => 'cru', 'Carub.0006s2807' => 'cru', 'Carub.0007s0039' => 'cru', 'Carub.0008s0169' => 'cru', 'Carub.0008s0636' => 'cru', 'Ca_00338_v3' => 'car', 'Ca_00542_v3' => 'car', 'Ca_01844_v3' => 'car', 'Ca_10611_v3' => 'car', 'Ca_13326_v3' => 'car', 'Ca_17944_v3' => 'car', 'Ca_18546_v3' => 'car', 'Ca_24219_v3' => 'car', 'Ca_29972_v3' => 'car', 'CBR_g3681' => 'cbr', 'CBR_g40021' => 'cbr', 'Cc01_g08140' => 'ccan', 'Cc02_g13410' => 'ccan', 'Cc02_g37480' => 'ccan', 'Cc05_g12030' => 'ccan', 'Cc09_g03370' => 'ccan', 'Cc09_g10300' => 'ccan', 'Cc10_g03530' => 'ccan', 'Cc10_g11380' => 'ccan', 'CDE01G0176' => 'cde', 'CDE02G0675' => 'cde', 'CDE02G0942' => 'cde', 'CDE02G1153' => 'cde', 'CDE02G4177' => 'cde', 'CDE04G2117' => 'cde', 'CDE04G2736' => 'cde', 'CDE08G1161' => 'cde', 'CDE09G1238' => 'cde', 'Cfa000467' => 'cfa', 'Cfa000947' => 'cfa', 'Cfa004969' => 'cfa', 'Cfa005284' => 'cfa', 'Cfa008993' => 'cfa', 'Cfa018187' => 'cfa', 'Cfa018454' => 'cfa', 'Cfa020585' => 'cfa', 'Ciclev10000424m.g' => 'ccl', 'Ciclev10003605m.g' => 'ccl', 'Ciclev10007828m.g' => 'ccl', 'Ciclev10014620m.g' => 'ccl', 'Ciclev10015169m.g' => 'ccl', 'Ciclev10018291m.g' => 'ccl', 'Ciclev10028256m.g' => 'ccl', 'Ciclev10033822m.g' => 'ccl', 'CiPaw.05G060300' => 'cil', 'CiPaw.05G085000' => 'cil', 'CiPaw.06G083700' => 'cil', 'CiPaw.06G120300' => 'cil', 'CiPaw.09G060500' => 'cil', 'CiPaw.09G123800' => 'cil', 'CiPaw.11G169700' => 'cil', 'CiPaw.12G118300' => 'cil', 'CiPaw.15G071000' => 'cil', 'CiPaw.15G081900' => 'cil', 'ClCG01G024610' => 'cla', 'ClCG03G006070' => 'cla', 'ClCG05G019250' => 'cla', 'ClCG09G009500' => 'cla', 'ClCG11G008200' => 'cla', 'ClCG11G018080' => 'cla', 'COL.COLO4_17373' => 'col', 'COL.COLO4_22994' => 'col', 'COL.COLO4_26389' => 'col', 'COL.COLO4_27170' => 'col', 'COL.COLO4_31074' => 'col', 'COL.COLO4_31465' => 'col', 'COL.COLO4_36438' => 'col', 'COL.COLO4_36439' => 'col', 'Cpa.g.c38781' => 'cpa', 'Cpa.g.sc128.12' => 'cpa', 'Cpa.g.sc166.7' => 'cpa', 'Cpa.g.sc166.8' => 'cpa', 'Cpa.g.sc20.111' => 'cpa', 'Cpa.g.sc27.31' => 'cpa', 'Cpa.g.sc64.36' => 'cpa', 'Cpa.g.sc64.37' => 'cpa', 'Cpa.g.sc66.49' => 'cpa', 'Cpa.g.sc80.64' => 'cpa', 'CsaV3_1G012320' => 'csa', 'CsaV3_2G008480' => 'csa', 'CsaV3_2G033450' => 'csa', 'CsaV3_3G044830' => 'csa', 'CsaV3_4G033710' => 'csa', 'CsaV3_6G051730' => 'csa', 'CsaV3_7G025350' => 'csa', 'CSS0001067' => 'camsi', 'CSS0005996' => 'camsi', 'CSS0006590' => 'camsi', 'CSS0009673' => 'camsi', 'CSS0010201' => 'camsi', 'CSS0010549' => 'camsi', 'CSS0011364' => 'camsi', 'CSS0014473' => 'camsi', 'CSS0014961' => 'camsi', 'CSS0020191' => 'camsi', 'CSS0021165' => 'camsi', 'CSS0022306' => 'camsi', 'CSS0030591' => 'camsi', 'CSS0030696' => 'camsi', 'CSS0032653' => 'camsi', 'CSS0037487' => 'camsi', 'CSS0041102' => 'camsi', 'CSS0041261' => 'camsi', 'CSS0046246' => 'camsi', 'CSS0049256' => 'camsi', 'DCAR_004075' => 'dca', 'DCAR_011538' => 'dca', 'DCAR_019553' => 'dca', 'DCAR_020952' => 'dca', 'DCAR_021739' => 'dca', 'DCAR_027407' => 'dca', 'DCAR_027913' => 'dca', 'DCAR_028066' => 'dca', 'Dinv05899' => 'din', 'Dinv07563' => 'din', 'Dinv08010' => 'din', 'Dinv14125' => 'din', 'Dinv20172' => 'din', 'Dinv30743' => 'din', 'Dinv31229' => 'din', 'Dinv34162' => 'din', 'Dinv36028' => 'din', 'Dinv39368' => 'din', 'Dinv40565' => 'din', 'Dinv41706' => 'din', 'Duzib052G0089' => 'dzi', 'Duzib116G0641' => 'dzi', 'Duzib132G0069' => 'dzi', 'Duzib132G1219' => 'dzi', 'Duzib147G0278' => 'dzi', 'Duzib160G0480' => 'dzi', 'Duzib170G0661' => 'dzi', 'Duzib177G0591' => 'dzi', 'Duzib187G1353' => 'dzi', 'Duzib192G0858' => 'dzi', 'Duzib192G0883' => 'dzi', 'Duzib213G0506' => 'dzi', 'Duzib235G0289' => 'dzi', 'Duzib251G0422' => 'dzi', 'ECA232G3898' => 'eca', 'ECA233G5950' => 'eca', 'ECA234G1699' => 'eca', 'ECA234G2421' => 'eca', 'ECA236G0426' => 'eca', 'ECA236G4331' => 'eca', 'ECA248G2573' => 'eca', 'EL10Ac1g00077' => 'bvu', 'EL10Ac1g01746' => 'bvu', 'EL10Ac2g03464' => 'bvu', 'EL10Ac4g08176' => 'bvu', 'EL10Ac7g17521' => 'bvu', 'EL10Ac8g20386' => 'bvu', 'EL10Ac9g21343' => 'bvu', 'EL10Ac9g22688' => 'bvu', 'Eucgr.B03434' => 'egr', 'Eucgr.D00618' => 'egr', 'Eucgr.E02395' => 'egr', 'Eucgr.F01129' => 'egr', 'Eucgr.F02622' => 'egr', 'Eucgr.F04207' => 'egr', 'FAN01G0570' => 'fan', 'FAN03G3351' => 'fan', 'FAN06G3702' => 'fan', 'FAN07G2149' => 'fan', 'FAN10G3758' => 'fan', 'FAN11G1170' => 'fan', 'FAN11G2050' => 'fan', 'FAN11G2724' => 'fan', 'FAN12G1700' => 'fan', 'FAN12G2028' => 'fan', 'FAN15G1160' => 'fan', 'FAN15G3063' => 'fan', 'FAN16G2540' => 'fan', 'FAN16G3077' => 'fan', 'FAN16G3624' => 'fan', 'FAN17G0221' => 'fan', 'FAN20G2492' => 'fan', 'FAN20G2905' => 'fan', 'FAN21G0548' => 'fan', 'FAN21G1300' => 'fan', 'FAN22G0077' => 'fan', 'FAN22G1315' => 'fan', 'FAN24G1280' => 'fan', 'FAN24G1445' => 'fan', 'FAN24G3527' => 'fan', 'FAN25G0464' => 'fan', 'FAN25G2885' => 'fan', 'FAN25G3270' => 'fan', 'FAN27G1101' => 'fan', 'FAN27G2846' => 'fan', 'FAN27G3524' => 'fan', 'FvH4_2g11770' => 'fve', 'FvH4_2g15630' => 'fve', 'FvH4_3g05570' => 'fve', 'FvH4_3g09110' => 'fve', 'FvH4_3g19940' => 'fve', 'FvH4_4g04821' => 'fve', 'FvH4_4g31480' => 'fve', 'FvH4_7g01740' => 'fve', 'Glyma.05G130400' => 'gma', 'Glyma.05G156400' => 'gma', 'Glyma.07G197000' => 'gma', 'Glyma.08G085151' => 'gma', 'Glyma.08G114500' => 'gma', 'Glyma.08G300400' => 'gma', 'Glyma.10G215800' => 'gma', 'Glyma.12G224400' => 'gma', 'Glyma.13G179300' => 'gma', 'Glyma.13G218151' => 'gma', 'Glyma.13G238800' => 'gma', 'Glyma.13G276900' => 'gma', 'Glyma.14G078200' => 'gma', 'Glyma.15G074500' => 'gma', 'Glyma.15G094100' => 'gma', 'Glyma.17G247200' => 'gma', 'Glyma.18G120100' => 'gma', 'Glyma.20G176000' => 'gma', 'Gohir.A01G063600' => 'ghi', 'Gohir.A01G170301' => 'ghi', 'Gohir.A02G060500' => 'ghi', 'Gohir.A05G133850' => 'ghi', 'Gohir.A05G161400' => 'ghi', 'Gohir.A06G012900' => 'ghi', 'Gohir.A06G035901' => 'ghi', 'Gohir.A06G127100' => 'ghi', 'Gohir.A06G210500' => 'ghi', 'Gohir.A08G008650' => 'ghi', 'Gohir.A09G072700' => 'ghi', 'Gohir.A09G088301' => 'ghi', 'Gohir.A10G040600' => 'ghi', 'Gohir.A12G036300' => 'ghi', 'Gohir.A12G143350' => 'ghi', 'Gohir.A12G165500' => 'ghi', 'Gohir.A13G145700' => 'ghi', 'Gohir.D01G050000' => 'ghi', 'Gohir.D01G051366' => 'ghi', 'Gohir.D01G161350' => 'ghi', 'Gohir.D02G065900' => 'ghi', 'Gohir.D05G164200' => 'ghi', 'Gohir.D05G355500' => 'ghi', 'Gohir.D06G010400' => 'ghi', 'Gohir.D06G111250' => 'ghi', 'Gohir.D06G132000' => 'ghi', 'Gohir.D06G210500' => 'ghi', 'Gohir.D07G165675' => 'ghi', 'Gohir.D08G062240' => 'ghi', 'Gohir.D08G086101' => 'ghi', 'Gohir.D08G138060' => 'ghi', 'Gohir.D09G072300' => 'ghi', 'Gohir.D10G041400' => 'ghi', 'Gohir.D11G191020' => 'ghi', 'Gohir.D11G212066' => 'ghi', 'Gohir.D12G036300' => 'ghi', 'Gohir.D12G168600' => 'ghi', 'Gohir.D13G150600' => 'ghi', 'Gorai.001G057300' => 'gra', 'Gorai.002G069900' => 'gra', 'Gorai.002G200000' => 'gra', 'Gorai.003G067600' => 'gra', 'Gorai.005G074800' => 'gra', 'Gorai.006G087300' => 'gra', 'Gorai.008G037500' => 'gra', 'Gorai.008G181400' => 'gra', 'Gorai.009G169400' => 'gra', 'Gorai.009G387900' => 'gra', 'Gorai.010G013300' => 'gra', 'Gorai.010G153800' => 'gra', 'Gorai.010G255800' => 'gra', 'Gorai.011G043700' => 'gra', 'Gorai.011G198900' => 'gra', 'Gorai.013G168400' => 'gra', 'GSVIVG01005212001' => 'vvi', 'GSVIVG01006163001' => 'vvi', 'GSVIVG01009625001' => 'vvi', 'GSVIVG01014338001' => 'vvi', 'GSVIVG01020005001' => 'vvi', 'GSVIVG01021450001' => 'vvi', 'GSVIVG01023975001' => 'vvi', 'GSVIVG01034490001' => 'vvi', 'HanXRQChr04g0112071' => 'han', 'HanXRQChr05g0131151' => 'han', 'HanXRQChr09g0262371' => 'han', 'HanXRQChr09g0268401' => 'han', 'HanXRQChr10g0279241' => 'han', 'HanXRQChr10g0297961' => 'han', 'HanXRQChr11g0326231' => 'han', 'HanXRQChr11g0328471' => 'han', 'HanXRQChr16g0507941' => 'han', 'HanXRQChr17g0560211' => 'han', 'Haze_02108' => 'cav', 'Haze_02428' => 'cav', 'Haze_05593' => 'cav', 'Haze_06448' => 'cav', 'Haze_09427' => 'cav', 'Haze_12022' => 'cav', 'Haze_17612' => 'cav', 'Haze_17928' => 'cav', 'Hma1.2p1_0032F.1_g019250' => 'hma', 'Hma1.2p1_0163F.1_g072690' => 'hma', 'Hma1.2p1_0265F.1_g106710' => 'hma', 'Hma1.2p1_0286F.1_g113970' => 'hma', 'Hma1.2p1_0363F.1_g136640' => 'hma', 'Hma1.2p1_0584F.1_g183470' => 'hma', 'Hma1.2p1_0885F.1_g232570' => 'hma', 'HPP92_006022' => 'vpl', 'HPP92_007320' => 'vpl', 'HPP92_011521' => 'vpl', 'HPP92_019387' => 'vpl', 'HPP92_024038' => 'vpl', 'Hund05891' => 'sun', 'Hund06450' => 'sun', 'Hund12053' => 'sun', 'Hund16800' => 'sun', 'Hund21222' => 'sun', 'Hund22896' => 'sun', 'Hund23746' => 'sun', 'Hund27083' => 'sun', 'Lalb_Chr02g0141831' => 'lal', 'Lalb_Chr02g0141841' => 'lal', 'Lalb_Chr05g0220411' => 'lal', 'Lalb_Chr06g0162081' => 'lal', 'Lalb_Chr09g0327651' => 'lal', 'Lalb_Chr13g0295051' => 'lal', 'Lalb_Chr15g0086801' => 'lal', 'Lalb_Chr16g0383781' => 'lal', 'Lalb_Chr16g0383791' => 'lal', 'Lalb_Chr18g0055441' => 'lal', 'Lalb_Chr18g0059611' => 'lal', 'Lalb_Chr20g0109661' => 'lal', 'Lalb_Chr20g0109831' => 'lal', 'Lalb_Chr20g0121871' => 'lal', 'Lalb_Chr22g0355361' => 'lal', 'Lalb_Chr25g0286371' => 'lal', 'Lj1A1187G43' => 'lonja', 'Lj1A1205T50' => 'lonja', 'Lj1A800G33' => 'lonja', 'Lj1C1187T7' => 'lonja', 'Lj1C843T11' => 'lonja', 'Lj1g0010940' => 'lja', 'Lj2A288T69' => 'lonja', 'Lj3g0024276' => 'lja', 'Lj4A47T76' => 'lonja', 'Lj4g0005805' => 'lja', 'Lj4g0006097' => 'lja', 'Lj4g0008528' => 'lja', 'Lj4g0024907' => 'lja', 'Lj5g0012472' => 'lja', 'Lj5g0018648' => 'lja', 'Lj6C789G1' => 'lonja', 'Lj6g0004000' => 'lja', 'Lj7A292G67' => 'lonja', 'Lj7A292T64' => 'lonja', 'Lj9A400T58' => 'lonja', 'Lsat_1_v5_gn_1_126181' => 'lsa', 'Lsat_1_v5_gn_4_123041' => 'lsa', 'Lsat_1_v5_gn_4_133620' => 'lsa', 'Lsat_1_v5_gn_4_53221' => 'lsa', 'Lsat_1_v5_gn_4_71961' => 'lsa', 'Lsat_1_v5_gn_7_105241' => 'lsa', 'Lsat_1_v5_gn_7_21361' => 'lsa', 'Lsat_1_v5_gn_7_28860' => 'lsa', 'Lsat_1_v5_gn_7_31260' => 'lsa', 'Lsat_1_v5_gn_8_52801' => 'lsa', 'Manes.02G191400' => 'mes', 'Manes.03G110100' => 'mes', 'Manes.04G071100' => 'mes', 'Manes.05G100500' => 'mes', 'Manes.05G164700' => 'mes', 'Manes.15G087000' => 'mes', 'Manes.15G121500' => 'mes', 'Manes.16G028300' => 'mes', 'Manes.17G046100' => 'mes', 'Manes.17G069800' => 'mes', 'Manes.18G100500' => 'mes', 'Mapoly0002s0109' => 'mpo', 'Mapoly0024s0007' => 'mpo', 'Mapoly0089s0032' => 'mpo', 'MBI04_g42241_MAGBIO' => 'mbi', 'MBI05_g11988_MAGBIO' => 'mbi', 'MBI05_g35452_MAGBIO' => 'mbi', 'MBI07_g30179_MAGBIO' => 'mbi', 'MBI07_g35859_MAGBIO' => 'mbi', 'MBI07_g35860_MAGBIO' => 'mbi', 'MBI07_g37166_MAGBIO' => 'mbi', 'MBI08_g18172_MAGBIO' => 'mbi', 'MBI09_g08441_MAGBIO' => 'mbi', 'MBI13_g01676_MAGBIO' => 'mbi', 'MBI14_g42955_MAGBIO' => 'mbi', 'MBI16_g13161_MAGBIO' => 'mbi', 'MBI17_g27204_MAGBIO' => 'mbi', 'MBI19_g21595_MAGBIO' => 'mbi', 'MD00G1148400' => 'mdo', 'MD02G1301200' => 'mdo', 'MD03G1227800' => 'mdo', 'MD05G1041100' => 'mdo', 'MD05G1124800' => 'mdo', 'MD05G1284000' => 'mdo', 'MD05G1338800' => 'mdo', 'MD05G1338900' => 'mdo', 'MD07G1022800' => 'mdo', 'MD10G1047500' => 'mdo', 'MD10G1127500' => 'mdo', 'MD10G1262300' => 'mdo', 'MD10G1293800' => 'mdo', 'MD16G1074300' => 'mdo', 'Medtr1g021670' => 'mtr', 'Medtr1g096320' => 'mtr', 'Medtr2g013690' => 'mtr', 'Medtr2g019450' => 'mtr', 'Medtr2g085170' => 'mtr', 'Medtr4g088785' => 'mtr', 'Medtr8g055930' => 'mtr', 'Medtr8g085850' => 'mtr', 'MELO3C002605.2' => 'cme', 'MELO3C003891.2' => 'cme', 'MELO3C004012.2' => 'cme', 'MELO3C007134.2' => 'cme', 'MELO3C008118.2' => 'cme', 'MELO3C016700.2' => 'cme', 'MELO3C024127.2' => 'cme', 'MELO3C033361.2' => 'cme', 'MELO3C033362.2' => 'cme', 'Migut.C00430' => 'egut', 'Migut.C01246' => 'egut', 'Migut.E00101' => 'egut', 'Migut.H01486' => 'egut', 'Migut.H01939' => 'egut', 'Migut.K00360' => 'egut', 'Migut.M00910' => 'egut', 'Migut.M01139' => 'egut', 'Migut.N02677' => 'egut', 'MSTRG.13252' => 'ama', 'MSTRG.14701' => 'ama', 'MSTRG.1521' => 'ama', 'MSTRG.15884' => 'ama', 'MSTRG.16242' => 'ama', 'MSTRG.22285' => 'ama', 'MSTRG.22444' => 'ama', 'MSTRG.2349' => 'ama', 'MSTRG.26308' => 'ama', 'MSTRG.28296' => 'ama', 'MSTRG.9895' => 'ama', 'Nitab4.5_0000110g0060' => 'nta', 'Nitab4.5_0000420g0130' => 'nta', 'Nitab4.5_0000422g0030' => 'nta', 'Nitab4.5_0000560g0180' => 'nta', 'Nitab4.5_0000703g0100' => 'nta', 'Nitab4.5_0000786g0200' => 'nta', 'Nitab4.5_0001336g0020' => 'nta', 'Nitab4.5_0001796g0030' => 'nta', 'Nitab4.5_0003348g0060' => 'nta', 'Nitab4.5_0003698g0040' => 'nta', 'Nitab4.5_0003942g0090' => 'nta', 'Nitab4.5_0004775g0070' => 'nta', 'Nitab4.5_0004864g0030' => 'nta', 'Nitab4.5_0005615g0020' => 'nta', 'Nitab4.5_0009288g0030' => 'nta', 'Nitab4.5_0009341g0010' => 'nta', 'Nitab4.5_0009535g0010' => 'nta', 'Nn1g03995' => 'nnu', 'Nn1g04100' => 'nnu', 'Nn1g06530' => 'nnu', 'Nn3g16404' => 'nnu', 'Nn3g17212' => 'nnu', 'Nn3g20776' => 'nnu', 'Nn3g21923' => 'nnu', 'Nn5g27737' => 'nnu', 'Nn5g29461' => 'nnu', 'Nn7g38355' => 'nnu', 'Nn8g39873' => 'nnu', 'Oeu000548.2' => 'oeu', 'Oeu004672.1' => 'oeu', 'Oeu015605.2' => 'oeu', 'Oeu016092.1' => 'oeu', 'Oeu017879.3' => 'oeu', 'Oeu024910.1' => 'oeu', 'Oeu028965.1' => 'oeu', 'Oeu031269.1' => 'oeu', 'Oeu031270.1' => 'oeu', 'Oeu032535.1' => 'oeu', 'Oeu034151.1' => 'oeu', 'Oeu034152.1' => 'oeu', 'Oeu034588.2' => 'oeu', 'Oeu050846.1' => 'oeu', 'Oeu050849.2' => 'oeu', 'Oeu051063.2' => 'oeu', 'Oeu052368.1' => 'oeu', 'Oeu052370.1' => 'oeu', 'Os01g0210400' => 'osa', 'Os01g0304300' => 'osa', 'Os01g0749100' => 'osa', 'Os02g0745800' => 'osa', 'Os03g0769050' => 'osa', 'Os05g0531500' => 'osa', 'Os06g0724300' => 'osa', 'Os11g0198100' => 'osa', 'Peaxi162Scf00069g01425' => 'pax', 'Peaxi162Scf00280g00811' => 'pax', 'Peaxi162Scf00310g00615' => 'pax', 'Peaxi162Scf00362g00542' => 'pax', 'Peaxi162Scf00461g00310' => 'pax', 'Peaxi162Scf00530g00118' => 'pax', 'Peaxi162Scf00541g00057' => 'pax', 'Peaxi162Scf00661g00017' => 'pax', 'Peaxi162Scf00926g00027' => 'pax', 'Peaxi162Scf01064g00263' => 'pax', 'Peaxi162Scf01211g00135' => 'pax', 'PGR004G2336' => 'pgr', 'PGR042G0327' => 'pgr', 'PGR042G1957' => 'pgr', 'PGR042G2003' => 'pgr', 'PGR042G3929' => 'pgr', 'PGR083G1137' => 'pgr', 'PGR083G1364' => 'pgr', 'PGSC0003DMG400003381' => 'stu', 'PGSC0003DMG400003417' => 'stu', 'PGSC0003DMG400008981' => 'stu', 'PGSC0003DMG400012417' => 'stu', 'PGSC0003DMG400012823' => 'stu', 'PGSC0003DMG400016885' => 'stu', 'PGSC0003DMG400022812' => 'stu', 'PGSC0003DMG400029726' => 'stu', 'PGSC0003DMG401009243' => 'stu', 'PGSC0003DMG401031505' => 'stu', 'PGSC0003DMG402031505' => 'stu', 'Phvul.001G017600' => 'pvu', 'Phvul.002G193500' => 'pvu', 'Phvul.002G228900' => 'pvu', 'Phvul.002G236800' => 'pvu', 'Phvul.003G049500' => 'pvu', 'Phvul.005G072000' => 'pvu', 'Phvul.006G164800' => 'pvu', 'Phvul.006G185100' => 'pvu', 'Phvul.007G090000' => 'pvu', 'Potri.001G399800' => 'ptr', 'Potri.002G149900' => 'ptr', 'Potri.004G044100' => 'ptr', 'Potri.004G177600' => 'ptr', 'Potri.009G138000' => 'ptr', 'Potri.010G094000' => 'ptr', 'Potri.011G053000' => 'ptr', 'Potri.011G119300' => 'ptr', 'Potri.013G113700' => 'ptr', 'Potri.018G107800' => 'ptr', 'Potri.019G084100' => 'ptr', 'Pp3c14_23720' => 'ppa', 'Pp3c16_6340' => 'ppa', 'Pp3c23_13420' => 'ppa', 'Pp3c24_2740' => 'ppa', 'Pp3c25_860' => 'ppa', 'Pp3c8_21750' => 'ppa', 'Prupe.1G273000' => 'ppe', 'Prupe.1G273700' => 'ppe', 'Prupe.1G274100' => 'ppe', 'Prupe.2G023300' => 'ppe', 'Prupe.4G048000' => 'ppe', 'Prupe.4G080400' => 'ppe', 'Prupe.4G181200' => 'ppe', 'Prupe.8G056900' => 'ppe', 'Prupe.8G168700' => 'ppe', 'Psat1g189080' => 'psa', 'Psat1g204760' => 'psa', 'Psat4g175560' => 'psa', 'Psat4g177720' => 'psa', 'Psat5g244240' => 'psa', 'Psat6g010720' => 'psa', 'Psat6g187200' => 'psa', 'Psat7g072040' => 'psa', 'PSO017G3501' => 'pso', 'PSO063G2148' => 'pso', 'PSO063G5608' => 'pso', 'PSO210G6392' => 'pso', 'PSO541G2319' => 'pso', 'PSO541G2836' => 'pso', 'PSO541G4012' => 'pso', 'PSO541G6253' => 'pso', 'PSO675G0580' => 'pso', 'PSO675G0856' => 'pso', 'PSO675G5635' => 'pso', 'PSO675G9157' => 'pso', 'PSO832G1660' => 'pso', 'PSO832G1969' => 'pso', 'QL02p007186' => 'qlo', 'QL02p033904' => 'qlo', 'QL03p064391' => 'qlo', 'QL05p040593' => 'qlo', 'QL05p058242' => 'qlo', 'QL08p021825' => 'qlo', 'QL11p004981' => 'qlo', 'RcHm_v2.0_Chr1g0318301' => 'rch', 'RcHm_v2.0_Chr4g0418501' => 'rch', 'RcHm_v2.0_Chr4g0439971' => 'rch', 'RcHm_v2.0_Chr5g0008541' => 'rch', 'RcHm_v2.0_Chr5g0014101' => 'rch', 'RcHm_v2.0_Chr5g0014131' => 'rch', 'RcHm_v2.0_Chr5g0033621' => 'rch', 'RcHm_v2.0_Chr6g0272041' => 'rch', 'RcHm_v2.0_Chr6g0278831' => 'rch', 'Rhsim02G0130400' => 'rsi', 'Rhsim02G0171100' => 'rsi', 'Rhsim05G0053000' => 'rsi', 'Rhsim05G0053100' => 'rsi', 'Rhsim06G0096500' => 'rsi', 'Rhsim06G0096600' => 'rsi', 'Rhsim06G0199100' => 'rsi', 'Rhsim12G0062300' => 'rsi', 'Rhsim12G0062800' => 'rsi', 'Sabra02G0118600' => 'sbr', 'Sabra04G0027300' => 'sbr', 'Sabra04G0119500' => 'sbr', 'Sabra08G0112500' => 'sbr', 'Sabra11G0036800' => 'sbr', 'Sabra11G0103800' => 'sbr', 'Sabra13G0096300' => 'sbr', 'Sabra16G0262300' => 'sbr', 'Sabra18G0091700' => 'sbr', 'Sabra19G0095400' => 'sbr', 'SalBow6G3080' => 'sbo', 'SalBow7G1157' => 'sbo', 'SalBow7G2123' => 'sbo', 'SalBow7G2285' => 'sbo', 'SalBow7G3537' => 'sbo', 'SalBow8G2947' => 'sbo', 'SalBow8G4463' => 'sbo', 'SalBow8G5466' => 'sbo', 'Sc01g0001750' => 'sci', 'Sc02g0006640' => 'sci', 'Sc02g0006670' => 'sci', 'Sc04g0008220' => 'sci', 'Sc05g0006190' => 'sci', 'Sc08g0002760' => 'sci', 'Sc17g0006170' => 'sci', 'Sc22g0002050' => 'sci', 'Sc23g0001190' => 'sci', 'Sc24g0000980' => 'sci', 'Sed0006245' => 'sed', 'Sed0007543' => 'sed', 'Sed0009411' => 'sed', 'Sed0010765' => 'sed', 'Sed0012944' => 'sed', 'Sed0014682' => 'sed', 'Sed0016174' => 'sed', 'Sed0016796' => 'sed', 'Sed0020317' => 'sed', 'Sed0021467' => 'sed', 'SEGI_01316' => 'sgi', 'SEGI_03374' => 'sgi', 'SEGI_16265' => 'sgi', 'SEGI_18569' => 'sgi', 'SEGI_20351' => 'sgi', 'SEGI_26395' => 'sgi', 'SEGI_29469' => 'sgi', 'SEGI_34771' => 'sgi', 'SEGI_36769' => 'sgi', 'SEGI_37139' => 'sgi', 'SGA_v2.0_scaffold100G29687' => 'sas', 'SGA_v2.0_scaffold118G32472' => 'sas', 'SGA_v2.0_scaffold14G07051' => 'sas', 'SGA_v2.0_scaffold183G39845' => 'sas', 'SGA_v2.0_scaffold1G00174' => 'sas', 'SGA_v2.0_scaffold22G09714' => 'sas', 'SGA_v2.0_scaffold333G48992' => 'sas', 'SGA_v2.0_scaffold46G17491' => 'sas', 'SGA_v2.0_scaffold49G18294' => 'sas', 'SGA_v2.0_scaffold63G21658' => 'sas', 'SHI01741' => 'shi', 'SHI05771' => 'shi', 'SHI18077' => 'shi', 'SHI20525' => 'shi', 'SHI20527' => 'shi', 'SHI20528' => 'shi', 'SMO172G0185' => 'smo', 'SMO198G0020' => 'smo', 'SMO351G0006' => 'smo', 'SMO356G0118' => 'smo', 'SMO358G0296' => 'smo', 'SMO367G0079' => 'smo', 'SMO367G1277' => 'smo', 'Solyc01g014220.3' => 'sly', 'Solyc01g111770.2' => 'sly', 'Solyc02g078180.3' => 'sly', 'Solyc03g006430.3' => 'sly', 'Solyc03g006456.1' => 'sly', 'Solyc03g079860.2' => 'sly', 'Solyc04g079770.3' => 'sly', 'Solyc05g007430.4' => 'sly', 'Solyc07g063150.3' => 'sly', 'Solyc08g016620.3' => 'sly', 'Solyc09g057590.3' => 'sly', 'Solyc09g057600.1' => 'sly', 'Solyc10g009050.3' => 'sly', 'Solyc11g017420.2' => 'sly', 'Sopen01g053810' => 'spe', 'Sopen02g023040' => 'spe', 'Sopen03g002440' => 'spe', 'Sopen04g033350' => 'spe', 'Sopen05g003310' => 'spe', 'Sopen07g004050' => 'spe', 'Sopen07g031340' => 'spe', 'Sopen08g006990' => 'spe', 'Sopen10g004830' => 'spe', 'Sopen11g009370' => 'spe', 'Sp1g24450' => 'spa', 'Sp1g29670' => 'spa', 'Sp1g39600' => 'spa', 'Sp2g11080' => 'spa', 'Sp2g13970' => 'spa', 'Sp4g16130' => 'spa', 'Sp6g13080' => 'spa', 'Sp7g37270' => 'spa', 'TAR371G0065' => 'tar', 'TAR376G0340' => 'tar', 'TAR376G0435' => 'tar', 'TAR381G0002' => 'tar', 'TAR381G1236' => 'tar', 'TAR624G0055' => 'tar', 'TAR624G0324' => 'tar', 'TAR624G0696' => 'tar', 'TAR624G0906' => 'tar', 'TAR625G0107' => 'tar', 'TAR626G0015' => 'tar', 'TAR626G1356' => 'tar', 'TAR627G0888' => 'tar', 'TAR628G0399' => 'tar', 'TAR628G1327' => 'tar', 'TAR629G2831' => 'tar', 'TAR629G2874' => 'tar', 'TAR633G1432' => 'tar', 'TAR633G2771' => 'tar', 'THA.LOC104803394' => 'tha', 'THA.LOC104805153' => 'tha', 'THA.LOC104806784' => 'tha', 'THA.LOC104810473' => 'tha', 'THA.LOC104813100' => 'tha', 'THA.LOC104814215' => 'tha', 'THA.LOC104815554' => 'tha', 'THA.LOC104820544' => 'tha', 'THA.LOC104824754' => 'tha', 'THA.LOC104827717' => 'tha', 'Thecc.02G031400' => 'tca', 'Thecc.02G055900' => 'tca', 'Thecc.02G350800' => 'tca', 'Thecc.06G150900' => 'tca', 'Thecc.06G186600' => 'tca', 'Thecc.07G089600' => 'tca', 'Thecc.08G020400' => 'tca', 'Thecc.08G182100' => 'tca', 'Thhalv10000873m.g' => 'esa', 'Thhalv10004185m.g' => 'esa', 'Thhalv10006981m.g' => 'esa', 'Thhalv10007204m.g' => 'esa', 'Thhalv10011374m.g' => 'esa', 'Thhalv10013482m.g' => 'esa', 'Thhalv10017801m.g' => 'esa', 'Thhalv10024983m.g' => 'esa', 'TPR.G12072' => 'tpr', 'TPR.G15769' => 'tpr', 'TPR.G16504' => 'tpr', 'TPR.G16506' => 'tpr', 'TPR.G24345' => 'tpr', 'TPR.G26666' => 'tpr', 'TPR.G27320' => 'tpr', 'TPR.G31819' => 'tpr', 'TPR.G38879' => 'tpr', 'TPR.G39015' => 'tpr', 'TPR.G8819' => 'tpr', 'TWI09G0924' => 'twi', 'TWI12G0811' => 'twi', 'TWI12G1294' => 'twi', 'TWI31G0150' => 'twi', 'TWI36G1262' => 'twi', 'TWI38G1287' => 'twi', 'TWI38G1633' => 'twi', 'TWI38G1982' => 'twi', 'TWI39G0116' => 'twi', 'TWI60G1011' => 'twi', 'TWI63G0171' => 'twi', 'TWI73G0839' => 'twi', 'TWI79G1511' => 'twi', 'unitig_0.g915' => 'ugi', 'unitig_0.g916' => 'ugi', 'unitig_21.g20219' => 'ugi', 'unitig_21.g20416' => 'ugi', 'unitig_578.g16132' => 'ugi', 'unitig_578.g16718' => 'ugi', 'unitig_62.g23481' => 'ugi', 'unitig_744.g24535' => 'ugi', 'unitig_749.g13525' => 'ugi', 'vmacro01248' => 'vma', 'vmacro02290' => 'vma', 'vmacro10946' => 'vma', 'vmacro11865' => 'vma', 'vmacro12493' => 'vma', 'vmacro17322' => 'vma', 'vmacro21599' => 'vma', 'vmacro23041' => 'vma', 'VMungo0251G0004' => 'vmu', 'VMungo0251G2639' => 'vmu', 'VMungo0251G2967' => 'vmu', 'VMungo0540G0864' => 'vmu', 'VMungo0540G1569' => 'vmu', 'VMungo0647G0317' => 'vmu', 'VMungo0720G1373' => 'vmu', 'VMungo0720G1508' => 'vmu', 'VMungo1080G0485' => 'vmu', 'VMungo1215G3177' => 'vmu', 'Zm00001eb112600' => 'zma', 'Zm00001eb120220' => 'zma', 'Zm00001eb153240' => 'zma', 'Zm00001eb168880' => 'zma', 'Zm00001eb213920' => 'zma', 'Zm00001eb228280' => 'zma', 'Zm00001eb254580' => 'zma', 'Zm00001eb272180' => 'zma', 'Zm00001eb293190' => 'zma', 'Zm00001eb322930' => 'zma', 'Zm00001eb353360' => 'zma', 'Zm00001eb353390' => 'zma', 'Zm00001eb353430' => 'zma', 'Zm00001eb353440' => 'zma', 'Zm00001eb353780' => 'zma' ), 'gf_id' => 'HOM05D000499', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000499' ), 'data_identifier' => 'HOM05D000499', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000499', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1066', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p29780' => 'bna', 'A02p33180' => 'bna', 'A03p16470' => 'bna', 'A03p66010' => 'bna', 'A04p25970' => 'bna', 'A06p01270' => 'bna', 'A06p46080' => 'bna', 'A07p11400' => 'bna', 'A08p01840' => 'bna', 'A08p08230' => 'bna', 'A08p25740' => 'bna', 'A09p32070' => 'bna', 'A09p37830' => 'bna', 'A09p42840' => 'bna', 'A09p42850' => 'bna', 'Aa31LG10G2060' => 'aar', 'Aa31LG2G7410' => 'aar', 'Aa31LG6G10200' => 'aar', 'Aa31LG6G16680' => 'aar', 'Aa31LG6G8470' => 'aar', 'Aa31LG9G12730' => 'aar', 'Aa31LG9G13680' => 'aar', 'Aa31LG9G14920' => 'aar', 'Aa31LG9G6650' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4977' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5467' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3254' => 'aag', 'Actinidia02578' => 'ach', 'Actinidia07693' => 'ach', 'Actinidia08413' => 'ach', 'Actinidia08414' => 'ach', 'Actinidia15289' => 'ach', 'Actinidia19871' => 'ach', 'Actinidia21475' => 'ach', 'Actinidia22576' => 'ach', 'Actinidia28327' => 'ach', 'Actinidia32491' => 'ach', 'Actinidia39463' => 'ach', 'Actinidia39571' => 'ach', 'Ah.01g013750' => 'amhyb', 'Ah.01g023210' => 'amhyb', 'Ah.04g164850' => 'amhyb', 'Ah.05g178060' => 'amhyb', 'Ah.07g204270' => 'amhyb', 'Ah.07g208480' => 'amhyb', 'Ah.09g237410' => 'amhyb', 'Ah.14g089460' => 'amhyb', 'AL1G41790' => 'aly', 'AL1G49050' => 'aly', 'AL1G53810' => 'aly', 'AL1G61400' => 'aly', 'AL4G18580' => 'aly', 'AL5G12510' => 'aly', 'AL5G12540' => 'aly', 'AL6G43230' => 'aly', 'AL7G10370' => 'aly', 'AL7G19250' => 'aly', 'AL8G12240' => 'aly', 'AL8G18540' => 'aly', 'Aqoxy1G02409' => 'aox', 'Aqoxy2G03993' => 'aox', 'Aqoxy3G03357' => 'aox', 'Aqoxy4G00785' => 'aox', 'Aqoxy5G02598' => 'aox', 'Aqoxy6G00132' => 'aox', 'Aqoxy7G01776' => 'aox', 'Aqoxy7G02316' => 'aox', 'Aqoxy7G03973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.12AFKW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B8730' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27IQR1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3F75VG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3RE0GA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41TCQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.527VTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FIR39' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5W8UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DA38EV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ63HS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H1I32C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HC27T5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4M8AP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7N3CZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9UVDZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LS1NQA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT1D4B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SKC4TM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCFV76' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF9Q1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQWD9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1ZM88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WE07RT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YCK7VH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJE6Q6' => 'arhy', 'AT1G28240' => 'ath', 'AT1G34550' => 'ath', 'AT1G53040' => 'ath', 'AT2G02910' => 'ath', 'AT4G09630' => 'ath', 'AT4G38500' => 'ath', 'AT5G42660' => 'ath', 'AT5G46220' => 'ath', 'ATR0152G026' => 'atr', 'ATR0564G343' => 'atr', 'ATR0706G151' => 'atr', 'ATR0733G207' => 'atr', 'ATR0751G234' => 'atr', 'ATR0807G048' => 'atr', 'ATR1091G084' => 'atr', 'Atru.chr10.1229' => 'acertr', 'Atru.chr10.1230' => 'acertr', 'Atru.chr10.1874' => 'acertr', 'Atru.chr11.1808' => 'acertr', 'Atru.chr13.1795' => 'acertr', 'Atru.chr13.570' => 'acertr', 'Atru.chr2.2608' => 'acertr', 'Atru.chr2.2609' => 'acertr', 'Atru.chr5.3428' => 'acertr', 'Atru.chr8.1171' => 'acertr', 'AUR62004651' => 'cqu', 'AUR62008675' => 'cqu', 'AUR62010014' => 'cqu', 'AUR62013004' => 'cqu', 'AUR62014825' => 'cqu', 'AUR62015015' => 'cqu', 'AUR62015151' => 'cqu', 'AUR62017020' => 'cqu', 'AUR62019422' => 'cqu', 'AUR62023570' => 'cqu', 'AUR62025571' => 'cqu', 'AUR62029098' => 'cqu', 'AUR62033863' => 'cqu', 'AUR62034296' => 'cqu', 'AUR62040075' => 'cqu', 'BcaB02g07334' => 'bca', 'BcaB02g10575' => 'bca', 'BcaB03g12119' => 'bca', 'BcaB03g12120' => 'bca', 'BcaB03g13945' => 'bca', 'BcaB04g17123' => 'bca', 'BcaB04g17867' => 'bca', 'BcaB04g19839' => 'bca', 'BcaB07g30317' => 'bca', 'BcaB07g32432' => 'bca', 'BcaB07g33362' => 'bca', 'BcaB08g36611' => 'bca', 'BcaC01g00028' => 'bca', 'BcaC01g01356' => 'bca', 'BcaC01g02034' => 'bca', 'BcaC01g06051' => 'bca', 'BcaC03g16839' => 'bca', 'BcaC03g17176' => 'bca', 'BcaC05g26829' => 'bca', 'BcaC06g31490' => 'bca', 'BcaC06g35344' => 'bca', 'BcaC06g36570' => 'bca', 'BcaC07g37537' => 'bca', 'BcaC08g43491' => 'bca', 'BcaC08g43773' => 'bca', 'BcaNung00234' => 'bca', 'BcaNung01982' => 'bca', 'BcaNung03707' => 'bca', 'BcaNung06454' => 'bca', 'BolC2t10762H' => 'bol', 'BolC2t11191H' => 'bol', 'BolC3t14322H' => 'bol', 'BolC3t19747H' => 'bol', 'BolC3t21425H' => 'bol', 'BolC4t27800H' => 'bol', 'BolC5t31423H' => 'bol', 'BolC6t35951H' => 'bol', 'BolC6t36282H' => 'bol', 'BolC7t40678H' => 'bol', 'BolC7t40679H' => 'bol', 'BolC7t42222H' => 'bol', 'BolC7t43492H' => 'bol', 'BolC7t46785H' => 'bol', 'BolC8t47853H' => 'bol', 'BolC9t56805H' => 'bol', 'BraA02t08000Z' => 'bra', 'BraA02t08341Z' => 'bra', 'BraA03t10936Z' => 'bra', 'BraA03t15657Z' => 'bra', 'BraA04t18100Z' => 'bra', 'BraA05t20523Z' => 'bra', 'BraA06t23353Z' => 'bra', 'BraA06t27473Z' => 'bra', 'BraA06t27769Z' => 'bra', 'BraA07t28928Z' => 'bra', 'BraA08t32236Z' => 'bra', 'BraA08t32841Z' => 'bra', 'BraA08t34524Z' => 'bra', 'BraA09t38742Z' => 'bra', 'BraA09t39295Z' => 'bra', 'C02p47180' => 'bna', 'C02p50990' => 'bna', 'C03p19360' => 'bna', 'C03p74950' => 'bna', 'C03p91000' => 'bna', 'C04p63260' => 'bna', 'C05p27050' => 'bna', 'C06p08750' => 'bna', 'C06p11490' => 'bna', 'C07p02820' => 'bna', 'C07p17180' => 'bna', 'C07p29440' => 'bna', 'C07p63730' => 'bna', 'C09p39260' => 'bna', 'CAN.G1164.34' => 'can', 'CAN.G1164.39' => 'can', 'CAN.G1530.3' => 'can', 'CAN.G162.61' => 'can', 'CAN.G176.6' => 'can', 'CAN.G289.49' => 'can', 'CAN.G370.21' => 'can', 'CAN.G370.22' => 'can', 'CAN.G371.117' => 'can', 'CAN.G58.37' => 'can', 'CAN.G588.98' => 'can', 'CANSAT21G2266' => 'cansat', 'CANSAT25G2799' => 'cansat', 'CANSAT35G0862' => 'cansat', 'CANSAT35G1704' => 'cansat', 'CANSAT35G1760' => 'cansat', 'CANSAT56G3971' => 'cansat', 'CANSAT56G4116' => 'cansat', 'CANSAT80G1259' => 'cansat', 'CARHR027730' => 'chi', 'CARHR033880' => 'chi', 'CARHR043270' => 'chi', 'CARHR145330' => 'chi', 'CARHR145340' => 'chi', 'CARHR175570' => 'chi', 'CARHR181570' => 'chi', 'CARHR258470' => 'chi', 'CARHR260490' => 'chi', 'CARHR294220' => 'chi', 'Carub.0001s2668' => 'cru', 'Carub.0001s3257' => 'cru', 'Carub.0001s4220' => 'cru', 'Carub.0005s0179' => 'cru', 'Carub.0006s2807' => 'cru', 'Carub.0007s0039' => 'cru', 'Carub.0008s0169' => 'cru', 'Carub.0008s0636' => 'cru', 'Ca_00338_v3' => 'car', 'Ca_00542_v3' => 'car', 'Ca_01844_v3' => 'car', 'Ca_10611_v3' => 'car', 'Ca_13326_v3' => 'car', 'Ca_17944_v3' => 'car', 'Ca_18546_v3' => 'car', 'Ca_24219_v3' => 'car', 'Ca_29972_v3' => 'car', 'CBR_g3681' => 'cbr', 'CBR_g40021' => 'cbr', 'Cc01_g08140' => 'ccan', 'Cc02_g13410' => 'ccan', 'Cc02_g37480' => 'ccan', 'Cc05_g12030' => 'ccan', 'Cc09_g03370' => 'ccan', 'Cc09_g10300' => 'ccan', 'Cc10_g03530' => 'ccan', 'Cc10_g11380' => 'ccan', 'CDE01G0176' => 'cde', 'CDE02G0675' => 'cde', 'CDE02G0942' => 'cde', 'CDE02G1153' => 'cde', 'CDE02G4177' => 'cde', 'CDE04G2117' => 'cde', 'CDE04G2736' => 'cde', 'CDE08G1161' => 'cde', 'CDE09G1238' => 'cde', 'Cfa000467' => 'cfa', 'Cfa000947' => 'cfa', 'Cfa004969' => 'cfa', 'Cfa005284' => 'cfa', 'Cfa008993' => 'cfa', 'Cfa018187' => 'cfa', 'Cfa018454' => 'cfa', 'Cfa020585' => 'cfa', 'Ciclev10000424m.g' => 'ccl', 'Ciclev10003605m.g' => 'ccl', 'Ciclev10007828m.g' => 'ccl', 'Ciclev10014620m.g' => 'ccl', 'Ciclev10015169m.g' => 'ccl', 'Ciclev10018291m.g' => 'ccl', 'Ciclev10028256m.g' => 'ccl', 'Ciclev10033822m.g' => 'ccl', 'CiPaw.05G060300' => 'cil', 'CiPaw.05G085000' => 'cil', 'CiPaw.06G083700' => 'cil', 'CiPaw.06G120300' => 'cil', 'CiPaw.09G060500' => 'cil', 'CiPaw.09G123800' => 'cil', 'CiPaw.11G169700' => 'cil', 'CiPaw.12G118300' => 'cil', 'CiPaw.15G071000' => 'cil', 'CiPaw.15G081900' => 'cil', 'ClCG01G024610' => 'cla', 'ClCG03G006070' => 'cla', 'ClCG05G019250' => 'cla', 'ClCG09G009500' => 'cla', 'ClCG11G008200' => 'cla', 'ClCG11G018080' => 'cla', 'COL.COLO4_17373' => 'col', 'COL.COLO4_22994' => 'col', 'COL.COLO4_26389' => 'col', 'COL.COLO4_27170' => 'col', 'COL.COLO4_31074' => 'col', 'COL.COLO4_31465' => 'col', 'COL.COLO4_36438' => 'col', 'COL.COLO4_36439' => 'col', 'Cpa.g.c38781' => 'cpa', 'Cpa.g.sc128.12' => 'cpa', 'Cpa.g.sc166.7' => 'cpa', 'Cpa.g.sc166.8' => 'cpa', 'Cpa.g.sc20.111' => 'cpa', 'Cpa.g.sc27.31' => 'cpa', 'Cpa.g.sc64.36' => 'cpa', 'Cpa.g.sc64.37' => 'cpa', 'Cpa.g.sc66.49' => 'cpa', 'Cpa.g.sc80.64' => 'cpa', 'CsaV3_1G012320' => 'csa', 'CsaV3_2G008480' => 'csa', 'CsaV3_2G033450' => 'csa', 'CsaV3_3G044830' => 'csa', 'CsaV3_4G033710' => 'csa', 'CsaV3_6G051730' => 'csa', 'CsaV3_7G025350' => 'csa', 'CSS0001067' => 'camsi', 'CSS0005996' => 'camsi', 'CSS0006590' => 'camsi', 'CSS0009673' => 'camsi', 'CSS0010201' => 'camsi', 'CSS0010549' => 'camsi', 'CSS0011364' => 'camsi', 'CSS0014473' => 'camsi', 'CSS0014961' => 'camsi', 'CSS0020191' => 'camsi', 'CSS0021165' => 'camsi', 'CSS0022306' => 'camsi', 'CSS0030591' => 'camsi', 'CSS0030696' => 'camsi', 'CSS0032653' => 'camsi', 'CSS0037487' => 'camsi', 'CSS0041102' => 'camsi', 'CSS0041261' => 'camsi', 'CSS0046246' => 'camsi', 'CSS0049256' => 'camsi', 'DCAR_004075' => 'dca', 'DCAR_011538' => 'dca', 'DCAR_019553' => 'dca', 'DCAR_020952' => 'dca', 'DCAR_021739' => 'dca', 'DCAR_027407' => 'dca', 'DCAR_027913' => 'dca', 'DCAR_028066' => 'dca', 'Dinv05899' => 'din', 'Dinv07563' => 'din', 'Dinv08010' => 'din', 'Dinv14125' => 'din', 'Dinv20172' => 'din', 'Dinv30743' => 'din', 'Dinv31229' => 'din', 'Dinv34162' => 'din', 'Dinv36028' => 'din', 'Dinv39368' => 'din', 'Dinv40565' => 'din', 'Dinv41706' => 'din', 'Duzib052G0089' => 'dzi', 'Duzib116G0641' => 'dzi', 'Duzib132G0069' => 'dzi', 'Duzib132G1219' => 'dzi', 'Duzib147G0278' => 'dzi', 'Duzib160G0480' => 'dzi', 'Duzib170G0661' => 'dzi', 'Duzib177G0591' => 'dzi', 'Duzib187G1353' => 'dzi', 'Duzib192G0858' => 'dzi', 'Duzib192G0883' => 'dzi', 'Duzib213G0506' => 'dzi', 'Duzib235G0289' => 'dzi', 'Duzib251G0422' => 'dzi', 'ECA232G3898' => 'eca', 'ECA233G5950' => 'eca', 'ECA234G1699' => 'eca', 'ECA234G2421' => 'eca', 'ECA236G0426' => 'eca', 'ECA236G4331' => 'eca', 'ECA248G2573' => 'eca', 'EL10Ac1g00077' => 'bvu', 'EL10Ac1g01746' => 'bvu', 'EL10Ac2g03464' => 'bvu', 'EL10Ac4g08176' => 'bvu', 'EL10Ac7g17521' => 'bvu', 'EL10Ac8g20386' => 'bvu', 'EL10Ac9g21343' => 'bvu', 'EL10Ac9g22688' => 'bvu', 'Eucgr.B03434' => 'egr', 'Eucgr.D00618' => 'egr', 'Eucgr.E02395' => 'egr', 'Eucgr.F01129' => 'egr', 'Eucgr.F02622' => 'egr', 'Eucgr.F04207' => 'egr', 'FAN01G0570' => 'fan', 'FAN03G3351' => 'fan', 'FAN06G3702' => 'fan', 'FAN07G2149' => 'fan', 'FAN10G3758' => 'fan', 'FAN11G1170' => 'fan', 'FAN11G2050' => 'fan', 'FAN11G2724' => 'fan', 'FAN12G1700' => 'fan', 'FAN12G2028' => 'fan', 'FAN15G1160' => 'fan', 'FAN15G3063' => 'fan', 'FAN16G2540' => 'fan', 'FAN16G3077' => 'fan', 'FAN16G3624' => 'fan', 'FAN17G0221' => 'fan', 'FAN20G2492' => 'fan', 'FAN20G2905' => 'fan', 'FAN21G0548' => 'fan', 'FAN21G1300' => 'fan', 'FAN22G0077' => 'fan', 'FAN22G1315' => 'fan', 'FAN24G1280' => 'fan', 'FAN24G1445' => 'fan', 'FAN24G3527' => 'fan', 'FAN25G0464' => 'fan', 'FAN25G2885' => 'fan', 'FAN25G3270' => 'fan', 'FAN27G1101' => 'fan', 'FAN27G2846' => 'fan', 'FAN27G3524' => 'fan', 'FvH4_2g11770' => 'fve', 'FvH4_2g15630' => 'fve', 'FvH4_3g05570' => 'fve', 'FvH4_3g09110' => 'fve', 'FvH4_3g19940' => 'fve', 'FvH4_4g04821' => 'fve', 'FvH4_4g31480' => 'fve', 'FvH4_7g01740' => 'fve', 'Glyma.05G130400' => 'gma', 'Glyma.05G156400' => 'gma', 'Glyma.07G197000' => 'gma', 'Glyma.08G085151' => 'gma', 'Glyma.08G114500' => 'gma', 'Glyma.08G300400' => 'gma', 'Glyma.10G215800' => 'gma', 'Glyma.12G224400' => 'gma', 'Glyma.13G179300' => 'gma', 'Glyma.13G218151' => 'gma', 'Glyma.13G238800' => 'gma', 'Glyma.13G276900' => 'gma', 'Glyma.14G078200' => 'gma', 'Glyma.15G074500' => 'gma', 'Glyma.15G094100' => 'gma', 'Glyma.17G247200' => 'gma', 'Glyma.18G120100' => 'gma', 'Glyma.20G176000' => 'gma', 'Gohir.A01G063600' => 'ghi', 'Gohir.A01G170301' => 'ghi', 'Gohir.A02G060500' => 'ghi', 'Gohir.A05G133850' => 'ghi', 'Gohir.A05G161400' => 'ghi', 'Gohir.A06G012900' => 'ghi', 'Gohir.A06G035901' => 'ghi', 'Gohir.A06G127100' => 'ghi', 'Gohir.A06G210500' => 'ghi', 'Gohir.A08G008650' => 'ghi', 'Gohir.A09G072700' => 'ghi', 'Gohir.A09G088301' => 'ghi', 'Gohir.A10G040600' => 'ghi', 'Gohir.A12G036300' => 'ghi', 'Gohir.A12G143350' => 'ghi', 'Gohir.A12G165500' => 'ghi', 'Gohir.A13G145700' => 'ghi', 'Gohir.D01G050000' => 'ghi', 'Gohir.D01G051366' => 'ghi', 'Gohir.D01G161350' => 'ghi', 'Gohir.D02G065900' => 'ghi', 'Gohir.D05G164200' => 'ghi', 'Gohir.D05G355500' => 'ghi', 'Gohir.D06G010400' => 'ghi', 'Gohir.D06G111250' => 'ghi', 'Gohir.D06G132000' => 'ghi', 'Gohir.D06G210500' => 'ghi', 'Gohir.D07G165675' => 'ghi', 'Gohir.D08G062240' => 'ghi', 'Gohir.D08G086101' => 'ghi', 'Gohir.D08G138060' => 'ghi', 'Gohir.D09G072300' => 'ghi', 'Gohir.D10G041400' => 'ghi', 'Gohir.D11G191020' => 'ghi', 'Gohir.D11G212066' => 'ghi', 'Gohir.D12G036300' => 'ghi', 'Gohir.D12G168600' => 'ghi', 'Gohir.D13G150600' => 'ghi', 'Gorai.001G057300' => 'gra', 'Gorai.002G069900' => 'gra', 'Gorai.002G200000' => 'gra', 'Gorai.003G067600' => 'gra', 'Gorai.005G074800' => 'gra', 'Gorai.006G087300' => 'gra', 'Gorai.008G037500' => 'gra', 'Gorai.008G181400' => 'gra', 'Gorai.009G169400' => 'gra', 'Gorai.009G387900' => 'gra', 'Gorai.010G013300' => 'gra', 'Gorai.010G153800' => 'gra', 'Gorai.010G255800' => 'gra', 'Gorai.011G043700' => 'gra', 'Gorai.011G198900' => 'gra', 'Gorai.013G168400' => 'gra', 'GSVIVG01005212001' => 'vvi', 'GSVIVG01006163001' => 'vvi', 'GSVIVG01009625001' => 'vvi', 'GSVIVG01014338001' => 'vvi', 'GSVIVG01020005001' => 'vvi', 'GSVIVG01021450001' => 'vvi', 'GSVIVG01023975001' => 'vvi', 'GSVIVG01034490001' => 'vvi', 'HanXRQChr04g0112071' => 'han', 'HanXRQChr05g0131151' => 'han', 'HanXRQChr09g0262371' => 'han', 'HanXRQChr09g0268401' => 'han', 'HanXRQChr10g0279241' => 'han', 'HanXRQChr10g0297961' => 'han', 'HanXRQChr11g0326231' => 'han', 'HanXRQChr11g0328471' => 'han', 'HanXRQChr16g0507941' => 'han', 'HanXRQChr17g0560211' => 'han', 'Haze_02108' => 'cav', 'Haze_02428' => 'cav', 'Haze_05593' => 'cav', 'Haze_06448' => 'cav', 'Haze_09427' => 'cav', 'Haze_12022' => 'cav', 'Haze_17612' => 'cav', 'Haze_17928' => 'cav', 'Hma1.2p1_0032F.1_g019250' => 'hma', 'Hma1.2p1_0163F.1_g072690' => 'hma', 'Hma1.2p1_0265F.1_g106710' => 'hma', 'Hma1.2p1_0286F.1_g113970' => 'hma', 'Hma1.2p1_0363F.1_g136640' => 'hma', 'Hma1.2p1_0584F.1_g183470' => 'hma', 'Hma1.2p1_0885F.1_g232570' => 'hma', 'HPP92_006022' => 'vpl', 'HPP92_007320' => 'vpl', 'HPP92_011521' => 'vpl', 'HPP92_019387' => 'vpl', 'HPP92_024038' => 'vpl', 'Hund05891' => 'sun', 'Hund06450' => 'sun', 'Hund12053' => 'sun', 'Hund16800' => 'sun', 'Hund21222' => 'sun', 'Hund22896' => 'sun', 'Hund23746' => 'sun', 'Hund27083' => 'sun', 'Lalb_Chr02g0141831' => 'lal', 'Lalb_Chr02g0141841' => 'lal', 'Lalb_Chr05g0220411' => 'lal', 'Lalb_Chr06g0162081' => 'lal', 'Lalb_Chr09g0327651' => 'lal', 'Lalb_Chr13g0295051' => 'lal', 'Lalb_Chr15g0086801' => 'lal', 'Lalb_Chr16g0383781' => 'lal', 'Lalb_Chr16g0383791' => 'lal', 'Lalb_Chr18g0055441' => 'lal', 'Lalb_Chr18g0059611' => 'lal', 'Lalb_Chr20g0109661' => 'lal', 'Lalb_Chr20g0109831' => 'lal', 'Lalb_Chr20g0121871' => 'lal', 'Lalb_Chr22g0355361' => 'lal', 'Lalb_Chr25g0286371' => 'lal', 'Lj1A1187G43' => 'lonja', 'Lj1A1205T50' => 'lonja', 'Lj1A800G33' => 'lonja', 'Lj1C1187T7' => 'lonja', 'Lj1C843T11' => 'lonja', 'Lj1g0010940' => 'lja', 'Lj2A288T69' => 'lonja', 'Lj3g0024276' => 'lja', 'Lj4A47T76' => 'lonja', 'Lj4g0005805' => 'lja', 'Lj4g0006097' => 'lja', 'Lj4g0008528' => 'lja', 'Lj4g0024907' => 'lja', 'Lj5g0012472' => 'lja', 'Lj5g0018648' => 'lja', 'Lj6C789G1' => 'lonja', 'Lj6g0004000' => 'lja', 'Lj7A292G67' => 'lonja', 'Lj7A292T64' => 'lonja', 'Lj9A400T58' => 'lonja', 'Lsat_1_v5_gn_1_126181' => 'lsa', 'Lsat_1_v5_gn_4_123041' => 'lsa', 'Lsat_1_v5_gn_4_133620' => 'lsa', 'Lsat_1_v5_gn_4_53221' => 'lsa', 'Lsat_1_v5_gn_4_71961' => 'lsa', 'Lsat_1_v5_gn_7_105241' => 'lsa', 'Lsat_1_v5_gn_7_21361' => 'lsa', 'Lsat_1_v5_gn_7_28860' => 'lsa', 'Lsat_1_v5_gn_7_31260' => 'lsa', 'Lsat_1_v5_gn_8_52801' => 'lsa', 'Manes.02G191400' => 'mes', 'Manes.03G110100' => 'mes', 'Manes.04G071100' => 'mes', 'Manes.05G100500' => 'mes', 'Manes.05G164700' => 'mes', 'Manes.15G087000' => 'mes', 'Manes.15G121500' => 'mes', 'Manes.16G028300' => 'mes', 'Manes.17G046100' => 'mes', 'Manes.17G069800' => 'mes', 'Manes.18G100500' => 'mes', 'Mapoly0002s0109' => 'mpo', 'Mapoly0024s0007' => 'mpo', 'Mapoly0089s0032' => 'mpo', 'MBI04_g42241_MAGBIO' => 'mbi', 'MBI05_g11988_MAGBIO' => 'mbi', 'MBI05_g35452_MAGBIO' => 'mbi', 'MBI07_g30179_MAGBIO' => 'mbi', 'MBI07_g35859_MAGBIO' => 'mbi', 'MBI07_g35860_MAGBIO' => 'mbi', 'MBI07_g37166_MAGBIO' => 'mbi', 'MBI08_g18172_MAGBIO' => 'mbi', 'MBI09_g08441_MAGBIO' => 'mbi', 'MBI13_g01676_MAGBIO' => 'mbi', 'MBI14_g42955_MAGBIO' => 'mbi', 'MBI16_g13161_MAGBIO' => 'mbi', 'MBI17_g27204_MAGBIO' => 'mbi', 'MBI19_g21595_MAGBIO' => 'mbi', 'MD00G1148400' => 'mdo', 'MD02G1301200' => 'mdo', 'MD03G1227800' => 'mdo', 'MD05G1041100' => 'mdo', 'MD05G1124800' => 'mdo', 'MD05G1284000' => 'mdo', 'MD05G1338800' => 'mdo', 'MD05G1338900' => 'mdo', 'MD07G1022800' => 'mdo', 'MD10G1047500' => 'mdo', 'MD10G1127500' => 'mdo', 'MD10G1262300' => 'mdo', 'MD10G1293800' => 'mdo', 'MD16G1074300' => 'mdo', 'Medtr1g021670' => 'mtr', 'Medtr1g096320' => 'mtr', 'Medtr2g013690' => 'mtr', 'Medtr2g019450' => 'mtr', 'Medtr2g085170' => 'mtr', 'Medtr4g088785' => 'mtr', 'Medtr8g055930' => 'mtr', 'Medtr8g085850' => 'mtr', 'MELO3C002605.2' => 'cme', 'MELO3C003891.2' => 'cme', 'MELO3C004012.2' => 'cme', 'MELO3C007134.2' => 'cme', 'MELO3C008118.2' => 'cme', 'MELO3C016700.2' => 'cme', 'MELO3C024127.2' => 'cme', 'MELO3C033361.2' => 'cme', 'MELO3C033362.2' => 'cme', 'Migut.C00430' => 'egut', 'Migut.C01246' => 'egut', 'Migut.E00101' => 'egut', 'Migut.H01486' => 'egut', 'Migut.H01939' => 'egut', 'Migut.K00360' => 'egut', 'Migut.M00910' => 'egut', 'Migut.M01139' => 'egut', 'Migut.N02677' => 'egut', 'MSTRG.13252' => 'ama', 'MSTRG.14701' => 'ama', 'MSTRG.1521' => 'ama', 'MSTRG.15884' => 'ama', 'MSTRG.16242' => 'ama', 'MSTRG.22285' => 'ama', 'MSTRG.22444' => 'ama', 'MSTRG.2349' => 'ama', 'MSTRG.26308' => 'ama', 'MSTRG.28296' => 'ama', 'MSTRG.9895' => 'ama', 'Nitab4.5_0000110g0060' => 'nta', 'Nitab4.5_0000420g0130' => 'nta', 'Nitab4.5_0000422g0030' => 'nta', 'Nitab4.5_0000560g0180' => 'nta', 'Nitab4.5_0000703g0100' => 'nta', 'Nitab4.5_0000786g0200' => 'nta', 'Nitab4.5_0001336g0020' => 'nta', 'Nitab4.5_0001796g0030' => 'nta', 'Nitab4.5_0003348g0060' => 'nta', 'Nitab4.5_0003698g0040' => 'nta', 'Nitab4.5_0003942g0090' => 'nta', 'Nitab4.5_0004775g0070' => 'nta', 'Nitab4.5_0004864g0030' => 'nta', 'Nitab4.5_0005615g0020' => 'nta', 'Nitab4.5_0009288g0030' => 'nta', 'Nitab4.5_0009341g0010' => 'nta', 'Nitab4.5_0009535g0010' => 'nta', 'Nn1g03995' => 'nnu', 'Nn1g04100' => 'nnu', 'Nn1g06530' => 'nnu', 'Nn3g16404' => 'nnu', 'Nn3g17212' => 'nnu', 'Nn3g20776' => 'nnu', 'Nn3g21923' => 'nnu', 'Nn5g27737' => 'nnu', 'Nn5g29461' => 'nnu', 'Nn7g38355' => 'nnu', 'Nn8g39873' => 'nnu', 'Oeu000548.2' => 'oeu', 'Oeu004672.1' => 'oeu', 'Oeu015605.2' => 'oeu', 'Oeu016092.1' => 'oeu', 'Oeu017879.3' => 'oeu', 'Oeu024910.1' => 'oeu', 'Oeu028965.1' => 'oeu', 'Oeu031269.1' => 'oeu', 'Oeu031270.1' => 'oeu', 'Oeu032535.1' => 'oeu', 'Oeu034151.1' => 'oeu', 'Oeu034152.1' => 'oeu', 'Oeu034588.2' => 'oeu', 'Oeu050846.1' => 'oeu', 'Oeu050849.2' => 'oeu', 'Oeu051063.2' => 'oeu', 'Oeu052368.1' => 'oeu', 'Oeu052370.1' => 'oeu', 'Os01g0210400' => 'osa', 'Os01g0304300' => 'osa', 'Os01g0749100' => 'osa', 'Os02g0745800' => 'osa', 'Os03g0769050' => 'osa', 'Os05g0531500' => 'osa', 'Os06g0724300' => 'osa', 'Os11g0198100' => 'osa', 'Peaxi162Scf00069g01425' => 'pax', 'Peaxi162Scf00280g00811' => 'pax', 'Peaxi162Scf00310g00615' => 'pax', 'Peaxi162Scf00362g00542' => 'pax', 'Peaxi162Scf00461g00310' => 'pax', 'Peaxi162Scf00530g00118' => 'pax', 'Peaxi162Scf00541g00057' => 'pax', 'Peaxi162Scf00661g00017' => 'pax', 'Peaxi162Scf00926g00027' => 'pax', 'Peaxi162Scf01064g00263' => 'pax', 'Peaxi162Scf01211g00135' => 'pax', 'PGR004G2336' => 'pgr', 'PGR042G0327' => 'pgr', 'PGR042G1957' => 'pgr', 'PGR042G2003' => 'pgr', 'PGR042G3929' => 'pgr', 'PGR083G1137' => 'pgr', 'PGR083G1364' => 'pgr', 'PGSC0003DMG400003381' => 'stu', 'PGSC0003DMG400003417' => 'stu', 'PGSC0003DMG400008981' => 'stu', 'PGSC0003DMG400012417' => 'stu', 'PGSC0003DMG400012823' => 'stu', 'PGSC0003DMG400016885' => 'stu', 'PGSC0003DMG400022812' => 'stu', 'PGSC0003DMG400029726' => 'stu', 'PGSC0003DMG401009243' => 'stu', 'PGSC0003DMG401031505' => 'stu', 'PGSC0003DMG402031505' => 'stu', 'Phvul.001G017600' => 'pvu', 'Phvul.002G193500' => 'pvu', 'Phvul.002G228900' => 'pvu', 'Phvul.002G236800' => 'pvu', 'Phvul.003G049500' => 'pvu', 'Phvul.005G072000' => 'pvu', 'Phvul.006G164800' => 'pvu', 'Phvul.006G185100' => 'pvu', 'Phvul.007G090000' => 'pvu', 'Potri.001G399800' => 'ptr', 'Potri.002G149900' => 'ptr', 'Potri.004G044100' => 'ptr', 'Potri.004G177600' => 'ptr', 'Potri.009G138000' => 'ptr', 'Potri.010G094000' => 'ptr', 'Potri.011G053000' => 'ptr', 'Potri.011G119300' => 'ptr', 'Potri.013G113700' => 'ptr', 'Potri.018G107800' => 'ptr', 'Potri.019G084100' => 'ptr', 'Pp3c14_23720' => 'ppa', 'Pp3c16_6340' => 'ppa', 'Pp3c23_13420' => 'ppa', 'Pp3c24_2740' => 'ppa', 'Pp3c25_860' => 'ppa', 'Pp3c8_21750' => 'ppa', 'Prupe.1G273000' => 'ppe', 'Prupe.1G273700' => 'ppe', 'Prupe.1G274100' => 'ppe', 'Prupe.2G023300' => 'ppe', 'Prupe.4G048000' => 'ppe', 'Prupe.4G080400' => 'ppe', 'Prupe.4G181200' => 'ppe', 'Prupe.8G056900' => 'ppe', 'Prupe.8G168700' => 'ppe', 'Psat1g189080' => 'psa', 'Psat1g204760' => 'psa', 'Psat4g175560' => 'psa', 'Psat4g177720' => 'psa', 'Psat5g244240' => 'psa', 'Psat6g010720' => 'psa', 'Psat6g187200' => 'psa', 'Psat7g072040' => 'psa', 'PSO017G3501' => 'pso', 'PSO063G2148' => 'pso', 'PSO063G5608' => 'pso', 'PSO210G6392' => 'pso', 'PSO541G2319' => 'pso', 'PSO541G2836' => 'pso', 'PSO541G4012' => 'pso', 'PSO541G6253' => 'pso', 'PSO675G0580' => 'pso', 'PSO675G0856' => 'pso', 'PSO675G5635' => 'pso', 'PSO675G9157' => 'pso', 'PSO832G1660' => 'pso', 'PSO832G1969' => 'pso', 'QL02p007186' => 'qlo', 'QL02p033904' => 'qlo', 'QL03p064391' => 'qlo', 'QL05p040593' => 'qlo', 'QL05p058242' => 'qlo', 'QL08p021825' => 'qlo', 'QL11p004981' => 'qlo', 'RcHm_v2.0_Chr1g0318301' => 'rch', 'RcHm_v2.0_Chr4g0418501' => 'rch', 'RcHm_v2.0_Chr4g0439971' => 'rch', 'RcHm_v2.0_Chr5g0008541' => 'rch', 'RcHm_v2.0_Chr5g0014101' => 'rch', 'RcHm_v2.0_Chr5g0014131' => 'rch', 'RcHm_v2.0_Chr5g0033621' => 'rch', 'RcHm_v2.0_Chr6g0272041' => 'rch', 'RcHm_v2.0_Chr6g0278831' => 'rch', 'Rhsim02G0130400' => 'rsi', 'Rhsim02G0171100' => 'rsi', 'Rhsim05G0053000' => 'rsi', 'Rhsim05G0053100' => 'rsi', 'Rhsim06G0096500' => 'rsi', 'Rhsim06G0096600' => 'rsi', 'Rhsim06G0199100' => 'rsi', 'Rhsim12G0062300' => 'rsi', 'Rhsim12G0062800' => 'rsi', 'Sabra02G0118600' => 'sbr', 'Sabra04G0027300' => 'sbr', 'Sabra04G0119500' => 'sbr', 'Sabra08G0112500' => 'sbr', 'Sabra11G0036800' => 'sbr', 'Sabra11G0103800' => 'sbr', 'Sabra13G0096300' => 'sbr', 'Sabra16G0262300' => 'sbr', 'Sabra18G0091700' => 'sbr', 'Sabra19G0095400' => 'sbr', 'SalBow6G3080' => 'sbo', 'SalBow7G1157' => 'sbo', 'SalBow7G2123' => 'sbo', 'SalBow7G2285' => 'sbo', 'SalBow7G3537' => 'sbo', 'SalBow8G2947' => 'sbo', 'SalBow8G4463' => 'sbo', 'SalBow8G5466' => 'sbo', 'Sc01g0001750' => 'sci', 'Sc02g0006640' => 'sci', 'Sc02g0006670' => 'sci', 'Sc04g0008220' => 'sci', 'Sc05g0006190' => 'sci', 'Sc08g0002760' => 'sci', 'Sc17g0006170' => 'sci', 'Sc22g0002050' => 'sci', 'Sc23g0001190' => 'sci', 'Sc24g0000980' => 'sci', 'Sed0006245' => 'sed', 'Sed0007543' => 'sed', 'Sed0009411' => 'sed', 'Sed0010765' => 'sed', 'Sed0012944' => 'sed', 'Sed0014682' => 'sed', 'Sed0016174' => 'sed', 'Sed0016796' => 'sed', 'Sed0020317' => 'sed', 'Sed0021467' => 'sed', 'SEGI_01316' => 'sgi', 'SEGI_03374' => 'sgi', 'SEGI_16265' => 'sgi', 'SEGI_18569' => 'sgi', 'SEGI_20351' => 'sgi', 'SEGI_26395' => 'sgi', 'SEGI_29469' => 'sgi', 'SEGI_34771' => 'sgi', 'SEGI_36769' => 'sgi', 'SEGI_37139' => 'sgi', 'SGA_v2.0_scaffold100G29687' => 'sas', 'SGA_v2.0_scaffold118G32472' => 'sas', 'SGA_v2.0_scaffold14G07051' => 'sas', 'SGA_v2.0_scaffold183G39845' => 'sas', 'SGA_v2.0_scaffold1G00174' => 'sas', 'SGA_v2.0_scaffold22G09714' => 'sas', 'SGA_v2.0_scaffold333G48992' => 'sas', 'SGA_v2.0_scaffold46G17491' => 'sas', 'SGA_v2.0_scaffold49G18294' => 'sas', 'SGA_v2.0_scaffold63G21658' => 'sas', 'SHI01741' => 'shi', 'SHI05771' => 'shi', 'SHI18077' => 'shi', 'SHI20525' => 'shi', 'SHI20527' => 'shi', 'SHI20528' => 'shi', 'SMO172G0185' => 'smo', 'SMO198G0020' => 'smo', 'SMO351G0006' => 'smo', 'SMO356G0118' => 'smo', 'SMO358G0296' => 'smo', 'SMO367G0079' => 'smo', 'SMO367G1277' => 'smo', 'Solyc01g014220.3' => 'sly', 'Solyc01g111770.2' => 'sly', 'Solyc02g078180.3' => 'sly', 'Solyc03g006430.3' => 'sly', 'Solyc03g006456.1' => 'sly', 'Solyc03g079860.2' => 'sly', 'Solyc04g079770.3' => 'sly', 'Solyc05g007430.4' => 'sly', 'Solyc07g063150.3' => 'sly', 'Solyc08g016620.3' => 'sly', 'Solyc09g057590.3' => 'sly', 'Solyc09g057600.1' => 'sly', 'Solyc10g009050.3' => 'sly', 'Solyc11g017420.2' => 'sly', 'Sopen01g053810' => 'spe', 'Sopen02g023040' => 'spe', 'Sopen03g002440' => 'spe', 'Sopen04g033350' => 'spe', 'Sopen05g003310' => 'spe', 'Sopen07g004050' => 'spe', 'Sopen07g031340' => 'spe', 'Sopen08g006990' => 'spe', 'Sopen10g004830' => 'spe', 'Sopen11g009370' => 'spe', 'Sp1g24450' => 'spa', 'Sp1g29670' => 'spa', 'Sp1g39600' => 'spa', 'Sp2g11080' => 'spa', 'Sp2g13970' => 'spa', 'Sp4g16130' => 'spa', 'Sp6g13080' => 'spa', 'Sp7g37270' => 'spa', 'TAR371G0065' => 'tar', 'TAR376G0340' => 'tar', 'TAR376G0435' => 'tar', 'TAR381G0002' => 'tar', 'TAR381G1236' => 'tar', 'TAR624G0055' => 'tar', 'TAR624G0324' => 'tar', 'TAR624G0696' => 'tar', 'TAR624G0906' => 'tar', 'TAR625G0107' => 'tar', 'TAR626G0015' => 'tar', 'TAR626G1356' => 'tar', 'TAR627G0888' => 'tar', 'TAR628G0399' => 'tar', 'TAR628G1327' => 'tar', 'TAR629G2831' => 'tar', 'TAR629G2874' => 'tar', 'TAR633G1432' => 'tar', 'TAR633G2771' => 'tar', 'THA.LOC104803394' => 'tha', 'THA.LOC104805153' => 'tha', 'THA.LOC104806784' => 'tha', 'THA.LOC104810473' => 'tha', 'THA.LOC104813100' => 'tha', 'THA.LOC104814215' => 'tha', 'THA.LOC104815554' => 'tha', 'THA.LOC104820544' => 'tha', 'THA.LOC104824754' => 'tha', 'THA.LOC104827717' => 'tha', 'Thecc.02G031400' => 'tca', 'Thecc.02G055900' => 'tca', 'Thecc.02G350800' => 'tca', 'Thecc.06G150900' => 'tca', 'Thecc.06G186600' => 'tca', 'Thecc.07G089600' => 'tca', 'Thecc.08G020400' => 'tca', 'Thecc.08G182100' => 'tca', 'Thhalv10000873m.g' => 'esa', 'Thhalv10004185m.g' => 'esa', 'Thhalv10006981m.g' => 'esa', 'Thhalv10007204m.g' => 'esa', 'Thhalv10011374m.g' => 'esa', 'Thhalv10013482m.g' => 'esa', 'Thhalv10017801m.g' => 'esa', 'Thhalv10024983m.g' => 'esa', 'TPR.G12072' => 'tpr', 'TPR.G15769' => 'tpr', 'TPR.G16504' => 'tpr', 'TPR.G16506' => 'tpr', 'TPR.G24345' => 'tpr', 'TPR.G26666' => 'tpr', 'TPR.G27320' => 'tpr', 'TPR.G31819' => 'tpr', 'TPR.G38879' => 'tpr', 'TPR.G39015' => 'tpr', 'TPR.G8819' => 'tpr', 'TWI09G0924' => 'twi', 'TWI12G0811' => 'twi', 'TWI12G1294' => 'twi', 'TWI31G0150' => 'twi', 'TWI36G1262' => 'twi', 'TWI38G1287' => 'twi', 'TWI38G1633' => 'twi', 'TWI38G1982' => 'twi', 'TWI39G0116' => 'twi', 'TWI60G1011' => 'twi', 'TWI63G0171' => 'twi', 'TWI73G0839' => 'twi', 'TWI79G1511' => 'twi', 'unitig_0.g915' => 'ugi', 'unitig_0.g916' => 'ugi', 'unitig_21.g20219' => 'ugi', 'unitig_21.g20416' => 'ugi', 'unitig_578.g16132' => 'ugi', 'unitig_578.g16718' => 'ugi', 'unitig_62.g23481' => 'ugi', 'unitig_744.g24535' => 'ugi', 'unitig_749.g13525' => 'ugi', 'vmacro01248' => 'vma', 'vmacro02290' => 'vma', 'vmacro10946' => 'vma', 'vmacro11865' => 'vma', 'vmacro12493' => 'vma', 'vmacro17322' => 'vma', 'vmacro21599' => 'vma', 'vmacro23041' => 'vma', 'VMungo0251G0004' => 'vmu', 'VMungo0251G2639' => 'vmu', 'VMungo0251G2967' => 'vmu', 'VMungo0540G0864' => 'vmu', 'VMungo0540G1569' => 'vmu', 'VMungo0647G0317' => 'vmu', 'VMungo0720G1373' => 'vmu', 'VMungo0720G1508' => 'vmu', 'VMungo1080G0485' => 'vmu', 'VMungo1215G3177' => 'vmu', 'Zm00001eb112600' => 'zma', 'Zm00001eb120220' => 'zma', 'Zm00001eb153240' => 'zma', 'Zm00001eb168880' => 'zma', 'Zm00001eb213920' => 'zma', 'Zm00001eb228280' => 'zma', 'Zm00001eb254580' => 'zma', 'Zm00001eb272180' => 'zma', 'Zm00001eb293190' => 'zma', 'Zm00001eb322930' => 'zma', 'Zm00001eb353360' => 'zma', 'Zm00001eb353390' => 'zma', 'Zm00001eb353430' => 'zma', 'Zm00001eb353440' => 'zma', 'Zm00001eb353780' => 'zma' ) $gf_id = 'HOM05D000499' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000499' ) $data_identifier = 'HOM05D000499' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 29, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 12, 'amhyb' => (int) 8, 'aly' => (int) 12, 'aox' => (int) 9, 'arhy' => (int) 26, 'ath' => (int) 8, 'atr' => (int) 7, 'acertr' => (int) 10, 'cqu' => (int) 15, 'bca' => (int) 29, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 11, 'cansat' => (int) 8, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 9, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 8, 'cpa' => (int) 10, 'csa' => (int) 7, 'camsi' => (int) 20, 'dca' => (int) 8, 'din' => (int) 12, 'dzi' => (int) 14, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 6, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 38, 'gra' => (int) 16, 'vvi' => (int) 8, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 5, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 11, 'lja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 11, 'mpo' => (int) 3, 'mbi' => (int) 14, 'mdo' => (int) 14, 'mtr' => (int) 8, 'cme' => (int) 9, 'egut' => (int) 9, 'ama' => (int) 11, 'nta' => (int) 17, 'nnu' => (int) 11, 'oeu' => (int) 18, 'osa' => (int) 8, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 6, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 9, 'rsi' => (int) 9, 'sbr' => (int) 10, 'sbo' => (int) 8, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 10, 'sas' => (int) 10, 'shi' => (int) 6, 'smo' => (int) 7, 'sly' => (int) 14, 'spe' => (int) 10, 'spa' => (int) 8, 'tar' => (int) 19, 'tha' => (int) 10, 'tca' => (int) 8, 'esa' => (int) 8, 'tpr' => (int) 11, 'twi' => (int) 13, 'ugi' => (int) 9, 'vma' => (int) 8, 'vmu' => (int) 10, 'zma' => (int) 15 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb353780' $species_info = array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ) $local_species = 'ptr' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000499', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1066', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p29780' => 'bna', 'A02p33180' => 'bna', 'A03p16470' => 'bna', 'A03p66010' => 'bna', 'A04p25970' => 'bna', 'A06p01270' => 'bna', 'A06p46080' => 'bna', 'A07p11400' => 'bna', 'A08p01840' => 'bna', 'A08p08230' => 'bna', 'A08p25740' => 'bna', 'A09p32070' => 'bna', 'A09p37830' => 'bna', 'A09p42840' => 'bna', 'A09p42850' => 'bna', 'Aa31LG10G2060' => 'aar', 'Aa31LG2G7410' => 'aar', 'Aa31LG6G10200' => 'aar', 'Aa31LG6G16680' => 'aar', 'Aa31LG6G8470' => 'aar', 'Aa31LG9G12730' => 'aar', 'Aa31LG9G13680' => 'aar', 'Aa31LG9G14920' => 'aar', 'Aa31LG9G6650' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4977' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5467' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3254' => 'aag', 'Actinidia02578' => 'ach', 'Actinidia07693' => 'ach', 'Actinidia08413' => 'ach', 'Actinidia08414' => 'ach', 'Actinidia15289' => 'ach', 'Actinidia19871' => 'ach', 'Actinidia21475' => 'ach', 'Actinidia22576' => 'ach', 'Actinidia28327' => 'ach', 'Actinidia32491' => 'ach', 'Actinidia39463' => 'ach', 'Actinidia39571' => 'ach', 'Ah.01g013750' => 'amhyb', 'Ah.01g023210' => 'amhyb', 'Ah.04g164850' => 'amhyb', 'Ah.05g178060' => 'amhyb', 'Ah.07g204270' => 'amhyb', 'Ah.07g208480' => 'amhyb', 'Ah.09g237410' => 'amhyb', 'Ah.14g089460' => 'amhyb', 'AL1G41790' => 'aly', 'AL1G49050' => 'aly', 'AL1G53810' => 'aly', 'AL1G61400' => 'aly', 'AL4G18580' => 'aly', 'AL5G12510' => 'aly', 'AL5G12540' => 'aly', 'AL6G43230' => 'aly', 'AL7G10370' => 'aly', 'AL7G19250' => 'aly', 'AL8G12240' => 'aly', 'AL8G18540' => 'aly', 'Aqoxy1G02409' => 'aox', 'Aqoxy2G03993' => 'aox', 'Aqoxy3G03357' => 'aox', 'Aqoxy4G00785' => 'aox', 'Aqoxy5G02598' => 'aox', 'Aqoxy6G00132' => 'aox', 'Aqoxy7G01776' => 'aox', 'Aqoxy7G02316' => 'aox', 'Aqoxy7G03973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.12AFKW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B8730' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27IQR1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3F75VG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3RE0GA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41TCQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.527VTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FIR39' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5W8UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DA38EV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ63HS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H1I32C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HC27T5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4M8AP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7N3CZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9UVDZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LS1NQA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT1D4B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SKC4TM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCFV76' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF9Q1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQWD9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1ZM88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WE07RT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YCK7VH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJE6Q6' => 'arhy', 'AT1G28240' => 'ath', 'AT1G34550' => 'ath', 'AT1G53040' => 'ath', 'AT2G02910' => 'ath', 'AT4G09630' => 'ath', 'AT4G38500' => 'ath', 'AT5G42660' => 'ath', 'AT5G46220' => 'ath', 'ATR0152G026' => 'atr', 'ATR0564G343' => 'atr', 'ATR0706G151' => 'atr', 'ATR0733G207' => 'atr', 'ATR0751G234' => 'atr', 'ATR0807G048' => 'atr', 'ATR1091G084' => 'atr', 'Atru.chr10.1229' => 'acertr', 'Atru.chr10.1230' => 'acertr', 'Atru.chr10.1874' => 'acertr', 'Atru.chr11.1808' => 'acertr', 'Atru.chr13.1795' => 'acertr', 'Atru.chr13.570' => 'acertr', 'Atru.chr2.2608' => 'acertr', 'Atru.chr2.2609' => 'acertr', 'Atru.chr5.3428' => 'acertr', 'Atru.chr8.1171' => 'acertr', 'AUR62004651' => 'cqu', 'AUR62008675' => 'cqu', 'AUR62010014' => 'cqu', 'AUR62013004' => 'cqu', 'AUR62014825' => 'cqu', 'AUR62015015' => 'cqu', 'AUR62015151' => 'cqu', 'AUR62017020' => 'cqu', 'AUR62019422' => 'cqu', 'AUR62023570' => 'cqu', 'AUR62025571' => 'cqu', 'AUR62029098' => 'cqu', 'AUR62033863' => 'cqu', 'AUR62034296' => 'cqu', 'AUR62040075' => 'cqu', 'BcaB02g07334' => 'bca', 'BcaB02g10575' => 'bca', 'BcaB03g12119' => 'bca', 'BcaB03g12120' => 'bca', 'BcaB03g13945' => 'bca', 'BcaB04g17123' => 'bca', 'BcaB04g17867' => 'bca', 'BcaB04g19839' => 'bca', 'BcaB07g30317' => 'bca', 'BcaB07g32432' => 'bca', 'BcaB07g33362' => 'bca', 'BcaB08g36611' => 'bca', 'BcaC01g00028' => 'bca', 'BcaC01g01356' => 'bca', 'BcaC01g02034' => 'bca', 'BcaC01g06051' => 'bca', 'BcaC03g16839' => 'bca', 'BcaC03g17176' => 'bca', 'BcaC05g26829' => 'bca', 'BcaC06g31490' => 'bca', 'BcaC06g35344' => 'bca', 'BcaC06g36570' => 'bca', 'BcaC07g37537' => 'bca', 'BcaC08g43491' => 'bca', 'BcaC08g43773' => 'bca', 'BcaNung00234' => 'bca', 'BcaNung01982' => 'bca', 'BcaNung03707' => 'bca', 'BcaNung06454' => 'bca', 'BolC2t10762H' => 'bol', 'BolC2t11191H' => 'bol', 'BolC3t14322H' => 'bol', 'BolC3t19747H' => 'bol', 'BolC3t21425H' => 'bol', 'BolC4t27800H' => 'bol', 'BolC5t31423H' => 'bol', 'BolC6t35951H' => 'bol', 'BolC6t36282H' => 'bol', 'BolC7t40678H' => 'bol', 'BolC7t40679H' => 'bol', 'BolC7t42222H' => 'bol', 'BolC7t43492H' => 'bol', 'BolC7t46785H' => 'bol', 'BolC8t47853H' => 'bol', 'BolC9t56805H' => 'bol', 'BraA02t08000Z' => 'bra', 'BraA02t08341Z' => 'bra', 'BraA03t10936Z' => 'bra', 'BraA03t15657Z' => 'bra', 'BraA04t18100Z' => 'bra', 'BraA05t20523Z' => 'bra', 'BraA06t23353Z' => 'bra', 'BraA06t27473Z' => 'bra', 'BraA06t27769Z' => 'bra', 'BraA07t28928Z' => 'bra', 'BraA08t32236Z' => 'bra', 'BraA08t32841Z' => 'bra', 'BraA08t34524Z' => 'bra', 'BraA09t38742Z' => 'bra', 'BraA09t39295Z' => 'bra', 'C02p47180' => 'bna', 'C02p50990' => 'bna', 'C03p19360' => 'bna', 'C03p74950' => 'bna', 'C03p91000' => 'bna', 'C04p63260' => 'bna', 'C05p27050' => 'bna', 'C06p08750' => 'bna', 'C06p11490' => 'bna', 'C07p02820' => 'bna', 'C07p17180' => 'bna', 'C07p29440' => 'bna', 'C07p63730' => 'bna', 'C09p39260' => 'bna', 'CAN.G1164.34' => 'can', 'CAN.G1164.39' => 'can', 'CAN.G1530.3' => 'can', 'CAN.G162.61' => 'can', 'CAN.G176.6' => 'can', 'CAN.G289.49' => 'can', 'CAN.G370.21' => 'can', 'CAN.G370.22' => 'can', 'CAN.G371.117' => 'can', 'CAN.G58.37' => 'can', 'CAN.G588.98' => 'can', 'CANSAT21G2266' => 'cansat', 'CANSAT25G2799' => 'cansat', 'CANSAT35G0862' => 'cansat', 'CANSAT35G1704' => 'cansat', 'CANSAT35G1760' => 'cansat', 'CANSAT56G3971' => 'cansat', 'CANSAT56G4116' => 'cansat', 'CANSAT80G1259' => 'cansat', 'CARHR027730' => 'chi', 'CARHR033880' => 'chi', 'CARHR043270' => 'chi', 'CARHR145330' => 'chi', 'CARHR145340' => 'chi', 'CARHR175570' => 'chi', 'CARHR181570' => 'chi', 'CARHR258470' => 'chi', 'CARHR260490' => 'chi', 'CARHR294220' => 'chi', 'Carub.0001s2668' => 'cru', 'Carub.0001s3257' => 'cru', 'Carub.0001s4220' => 'cru', 'Carub.0005s0179' => 'cru', 'Carub.0006s2807' => 'cru', 'Carub.0007s0039' => 'cru', 'Carub.0008s0169' => 'cru', 'Carub.0008s0636' => 'cru', 'Ca_00338_v3' => 'car', 'Ca_00542_v3' => 'car', 'Ca_01844_v3' => 'car', 'Ca_10611_v3' => 'car', 'Ca_13326_v3' => 'car', 'Ca_17944_v3' => 'car', 'Ca_18546_v3' => 'car', 'Ca_24219_v3' => 'car', 'Ca_29972_v3' => 'car', 'CBR_g3681' => 'cbr', 'CBR_g40021' => 'cbr', 'Cc01_g08140' => 'ccan', 'Cc02_g13410' => 'ccan', 'Cc02_g37480' => 'ccan', 'Cc05_g12030' => 'ccan', 'Cc09_g03370' => 'ccan', 'Cc09_g10300' => 'ccan', 'Cc10_g03530' => 'ccan', 'Cc10_g11380' => 'ccan', 'CDE01G0176' => 'cde', 'CDE02G0675' => 'cde', 'CDE02G0942' => 'cde', 'CDE02G1153' => 'cde', 'CDE02G4177' => 'cde', 'CDE04G2117' => 'cde', 'CDE04G2736' => 'cde', 'CDE08G1161' => 'cde', 'CDE09G1238' => 'cde', 'Cfa000467' => 'cfa', 'Cfa000947' => 'cfa', 'Cfa004969' => 'cfa', 'Cfa005284' => 'cfa', 'Cfa008993' => 'cfa', 'Cfa018187' => 'cfa', 'Cfa018454' => 'cfa', 'Cfa020585' => 'cfa', 'Ciclev10000424m.g' => 'ccl', 'Ciclev10003605m.g' => 'ccl', 'Ciclev10007828m.g' => 'ccl', 'Ciclev10014620m.g' => 'ccl', 'Ciclev10015169m.g' => 'ccl', 'Ciclev10018291m.g' => 'ccl', 'Ciclev10028256m.g' => 'ccl', 'Ciclev10033822m.g' => 'ccl', 'CiPaw.05G060300' => 'cil', 'CiPaw.05G085000' => 'cil', 'CiPaw.06G083700' => 'cil', 'CiPaw.06G120300' => 'cil', 'CiPaw.09G060500' => 'cil', 'CiPaw.09G123800' => 'cil', 'CiPaw.11G169700' => 'cil', 'CiPaw.12G118300' => 'cil', 'CiPaw.15G071000' => 'cil', 'CiPaw.15G081900' => 'cil', 'ClCG01G024610' => 'cla', 'ClCG03G006070' => 'cla', 'ClCG05G019250' => 'cla', 'ClCG09G009500' => 'cla', 'ClCG11G008200' => 'cla', 'ClCG11G018080' => 'cla', 'COL.COLO4_17373' => 'col', 'COL.COLO4_22994' => 'col', 'COL.COLO4_26389' => 'col', 'COL.COLO4_27170' => 'col', 'COL.COLO4_31074' => 'col', 'COL.COLO4_31465' => 'col', 'COL.COLO4_36438' => 'col', 'COL.COLO4_36439' => 'col', 'Cpa.g.c38781' => 'cpa', 'Cpa.g.sc128.12' => 'cpa', 'Cpa.g.sc166.7' => 'cpa', 'Cpa.g.sc166.8' => 'cpa', 'Cpa.g.sc20.111' => 'cpa', 'Cpa.g.sc27.31' => 'cpa', 'Cpa.g.sc64.36' => 'cpa', 'Cpa.g.sc64.37' => 'cpa', 'Cpa.g.sc66.49' => 'cpa', 'Cpa.g.sc80.64' => 'cpa', 'CsaV3_1G012320' => 'csa', 'CsaV3_2G008480' => 'csa', 'CsaV3_2G033450' => 'csa', 'CsaV3_3G044830' => 'csa', 'CsaV3_4G033710' => 'csa', 'CsaV3_6G051730' => 'csa', 'CsaV3_7G025350' => 'csa', 'CSS0001067' => 'camsi', 'CSS0005996' => 'camsi', 'CSS0006590' => 'camsi', 'CSS0009673' => 'camsi', 'CSS0010201' => 'camsi', 'CSS0010549' => 'camsi', 'CSS0011364' => 'camsi', 'CSS0014473' => 'camsi', 'CSS0014961' => 'camsi', 'CSS0020191' => 'camsi', 'CSS0021165' => 'camsi', 'CSS0022306' => 'camsi', 'CSS0030591' => 'camsi', 'CSS0030696' => 'camsi', 'CSS0032653' => 'camsi', 'CSS0037487' => 'camsi', 'CSS0041102' => 'camsi', 'CSS0041261' => 'camsi', 'CSS0046246' => 'camsi', 'CSS0049256' => 'camsi', 'DCAR_004075' => 'dca', 'DCAR_011538' => 'dca', 'DCAR_019553' => 'dca', 'DCAR_020952' => 'dca', 'DCAR_021739' => 'dca', 'DCAR_027407' => 'dca', 'DCAR_027913' => 'dca', 'DCAR_028066' => 'dca', 'Dinv05899' => 'din', 'Dinv07563' => 'din', 'Dinv08010' => 'din', 'Dinv14125' => 'din', 'Dinv20172' => 'din', 'Dinv30743' => 'din', 'Dinv31229' => 'din', 'Dinv34162' => 'din', 'Dinv36028' => 'din', 'Dinv39368' => 'din', 'Dinv40565' => 'din', 'Dinv41706' => 'din', 'Duzib052G0089' => 'dzi', 'Duzib116G0641' => 'dzi', 'Duzib132G0069' => 'dzi', 'Duzib132G1219' => 'dzi', 'Duzib147G0278' => 'dzi', 'Duzib160G0480' => 'dzi', 'Duzib170G0661' => 'dzi', 'Duzib177G0591' => 'dzi', 'Duzib187G1353' => 'dzi', 'Duzib192G0858' => 'dzi', 'Duzib192G0883' => 'dzi', 'Duzib213G0506' => 'dzi', 'Duzib235G0289' => 'dzi', 'Duzib251G0422' => 'dzi', 'ECA232G3898' => 'eca', 'ECA233G5950' => 'eca', 'ECA234G1699' => 'eca', 'ECA234G2421' => 'eca', 'ECA236G0426' => 'eca', 'ECA236G4331' => 'eca', 'ECA248G2573' => 'eca', 'EL10Ac1g00077' => 'bvu', 'EL10Ac1g01746' => 'bvu', 'EL10Ac2g03464' => 'bvu', 'EL10Ac4g08176' => 'bvu', 'EL10Ac7g17521' => 'bvu', 'EL10Ac8g20386' => 'bvu', 'EL10Ac9g21343' => 'bvu', 'EL10Ac9g22688' => 'bvu', 'Eucgr.B03434' => 'egr', 'Eucgr.D00618' => 'egr', 'Eucgr.E02395' => 'egr', 'Eucgr.F01129' => 'egr', 'Eucgr.F02622' => 'egr', 'Eucgr.F04207' => 'egr', 'FAN01G0570' => 'fan', 'FAN03G3351' => 'fan', 'FAN06G3702' => 'fan', 'FAN07G2149' => 'fan', 'FAN10G3758' => 'fan', 'FAN11G1170' => 'fan', 'FAN11G2050' => 'fan', 'FAN11G2724' => 'fan', 'FAN12G1700' => 'fan', 'FAN12G2028' => 'fan', 'FAN15G1160' => 'fan', 'FAN15G3063' => 'fan', 'FAN16G2540' => 'fan', 'FAN16G3077' => 'fan', 'FAN16G3624' => 'fan', 'FAN17G0221' => 'fan', 'FAN20G2492' => 'fan', 'FAN20G2905' => 'fan', 'FAN21G0548' => 'fan', 'FAN21G1300' => 'fan', 'FAN22G0077' => 'fan', 'FAN22G1315' => 'fan', 'FAN24G1280' => 'fan', 'FAN24G1445' => 'fan', 'FAN24G3527' => 'fan', 'FAN25G0464' => 'fan', 'FAN25G2885' => 'fan', 'FAN25G3270' => 'fan', 'FAN27G1101' => 'fan', 'FAN27G2846' => 'fan', 'FAN27G3524' => 'fan', 'FvH4_2g11770' => 'fve', 'FvH4_2g15630' => 'fve', 'FvH4_3g05570' => 'fve', 'FvH4_3g09110' => 'fve', 'FvH4_3g19940' => 'fve', 'FvH4_4g04821' => 'fve', 'FvH4_4g31480' => 'fve', 'FvH4_7g01740' => 'fve', 'Glyma.05G130400' => 'gma', 'Glyma.05G156400' => 'gma', 'Glyma.07G197000' => 'gma', 'Glyma.08G085151' => 'gma', 'Glyma.08G114500' => 'gma', 'Glyma.08G300400' => 'gma', 'Glyma.10G215800' => 'gma', 'Glyma.12G224400' => 'gma', 'Glyma.13G179300' => 'gma', 'Glyma.13G218151' => 'gma', 'Glyma.13G238800' => 'gma', 'Glyma.13G276900' => 'gma', 'Glyma.14G078200' => 'gma', 'Glyma.15G074500' => 'gma', 'Glyma.15G094100' => 'gma', 'Glyma.17G247200' => 'gma', 'Glyma.18G120100' => 'gma', 'Glyma.20G176000' => 'gma', 'Gohir.A01G063600' => 'ghi', 'Gohir.A01G170301' => 'ghi', 'Gohir.A02G060500' => 'ghi', 'Gohir.A05G133850' => 'ghi', 'Gohir.A05G161400' => 'ghi', 'Gohir.A06G012900' => 'ghi', 'Gohir.A06G035901' => 'ghi', 'Gohir.A06G127100' => 'ghi', 'Gohir.A06G210500' => 'ghi', 'Gohir.A08G008650' => 'ghi', 'Gohir.A09G072700' => 'ghi', 'Gohir.A09G088301' => 'ghi', 'Gohir.A10G040600' => 'ghi', 'Gohir.A12G036300' => 'ghi', 'Gohir.A12G143350' => 'ghi', 'Gohir.A12G165500' => 'ghi', 'Gohir.A13G145700' => 'ghi', 'Gohir.D01G050000' => 'ghi', 'Gohir.D01G051366' => 'ghi', 'Gohir.D01G161350' => 'ghi', 'Gohir.D02G065900' => 'ghi', 'Gohir.D05G164200' => 'ghi', 'Gohir.D05G355500' => 'ghi', 'Gohir.D06G010400' => 'ghi', 'Gohir.D06G111250' => 'ghi', 'Gohir.D06G132000' => 'ghi', 'Gohir.D06G210500' => 'ghi', 'Gohir.D07G165675' => 'ghi', 'Gohir.D08G062240' => 'ghi', 'Gohir.D08G086101' => 'ghi', 'Gohir.D08G138060' => 'ghi', 'Gohir.D09G072300' => 'ghi', 'Gohir.D10G041400' => 'ghi', 'Gohir.D11G191020' => 'ghi', 'Gohir.D11G212066' => 'ghi', 'Gohir.D12G036300' => 'ghi', 'Gohir.D12G168600' => 'ghi', 'Gohir.D13G150600' => 'ghi', 'Gorai.001G057300' => 'gra', 'Gorai.002G069900' => 'gra', 'Gorai.002G200000' => 'gra', 'Gorai.003G067600' => 'gra', 'Gorai.005G074800' => 'gra', 'Gorai.006G087300' => 'gra', 'Gorai.008G037500' => 'gra', 'Gorai.008G181400' => 'gra', 'Gorai.009G169400' => 'gra', 'Gorai.009G387900' => 'gra', 'Gorai.010G013300' => 'gra', 'Gorai.010G153800' => 'gra', 'Gorai.010G255800' => 'gra', 'Gorai.011G043700' => 'gra', 'Gorai.011G198900' => 'gra', 'Gorai.013G168400' => 'gra', 'GSVIVG01005212001' => 'vvi', 'GSVIVG01006163001' => 'vvi', 'GSVIVG01009625001' => 'vvi', 'GSVIVG01014338001' => 'vvi', 'GSVIVG01020005001' => 'vvi', 'GSVIVG01021450001' => 'vvi', 'GSVIVG01023975001' => 'vvi', 'GSVIVG01034490001' => 'vvi', 'HanXRQChr04g0112071' => 'han', 'HanXRQChr05g0131151' => 'han', 'HanXRQChr09g0262371' => 'han', 'HanXRQChr09g0268401' => 'han', 'HanXRQChr10g0279241' => 'han', 'HanXRQChr10g0297961' => 'han', 'HanXRQChr11g0326231' => 'han', 'HanXRQChr11g0328471' => 'han', 'HanXRQChr16g0507941' => 'han', 'HanXRQChr17g0560211' => 'han', 'Haze_02108' => 'cav', 'Haze_02428' => 'cav', 'Haze_05593' => 'cav', 'Haze_06448' => 'cav', 'Haze_09427' => 'cav', 'Haze_12022' => 'cav', 'Haze_17612' => 'cav', 'Haze_17928' => 'cav', 'Hma1.2p1_0032F.1_g019250' => 'hma', 'Hma1.2p1_0163F.1_g072690' => 'hma', 'Hma1.2p1_0265F.1_g106710' => 'hma', 'Hma1.2p1_0286F.1_g113970' => 'hma', 'Hma1.2p1_0363F.1_g136640' => 'hma', 'Hma1.2p1_0584F.1_g183470' => 'hma', 'Hma1.2p1_0885F.1_g232570' => 'hma', 'HPP92_006022' => 'vpl', 'HPP92_007320' => 'vpl', 'HPP92_011521' => 'vpl', 'HPP92_019387' => 'vpl', 'HPP92_024038' => 'vpl', 'Hund05891' => 'sun', 'Hund06450' => 'sun', 'Hund12053' => 'sun', 'Hund16800' => 'sun', 'Hund21222' => 'sun', 'Hund22896' => 'sun', 'Hund23746' => 'sun', 'Hund27083' => 'sun', 'Lalb_Chr02g0141831' => 'lal', 'Lalb_Chr02g0141841' => 'lal', 'Lalb_Chr05g0220411' => 'lal', 'Lalb_Chr06g0162081' => 'lal', 'Lalb_Chr09g0327651' => 'lal', 'Lalb_Chr13g0295051' => 'lal', 'Lalb_Chr15g0086801' => 'lal', 'Lalb_Chr16g0383781' => 'lal', 'Lalb_Chr16g0383791' => 'lal', 'Lalb_Chr18g0055441' => 'lal', 'Lalb_Chr18g0059611' => 'lal', 'Lalb_Chr20g0109661' => 'lal', 'Lalb_Chr20g0109831' => 'lal', 'Lalb_Chr20g0121871' => 'lal', 'Lalb_Chr22g0355361' => 'lal', 'Lalb_Chr25g0286371' => 'lal', 'Lj1A1187G43' => 'lonja', 'Lj1A1205T50' => 'lonja', 'Lj1A800G33' => 'lonja', 'Lj1C1187T7' => 'lonja', 'Lj1C843T11' => 'lonja', 'Lj1g0010940' => 'lja', 'Lj2A288T69' => 'lonja', 'Lj3g0024276' => 'lja', 'Lj4A47T76' => 'lonja', 'Lj4g0005805' => 'lja', 'Lj4g0006097' => 'lja', 'Lj4g0008528' => 'lja', 'Lj4g0024907' => 'lja', 'Lj5g0012472' => 'lja', 'Lj5g0018648' => 'lja', 'Lj6C789G1' => 'lonja', 'Lj6g0004000' => 'lja', 'Lj7A292G67' => 'lonja', 'Lj7A292T64' => 'lonja', 'Lj9A400T58' => 'lonja', 'Lsat_1_v5_gn_1_126181' => 'lsa', 'Lsat_1_v5_gn_4_123041' => 'lsa', 'Lsat_1_v5_gn_4_133620' => 'lsa', 'Lsat_1_v5_gn_4_53221' => 'lsa', 'Lsat_1_v5_gn_4_71961' => 'lsa', 'Lsat_1_v5_gn_7_105241' => 'lsa', 'Lsat_1_v5_gn_7_21361' => 'lsa', 'Lsat_1_v5_gn_7_28860' => 'lsa', 'Lsat_1_v5_gn_7_31260' => 'lsa', 'Lsat_1_v5_gn_8_52801' => 'lsa', 'Manes.02G191400' => 'mes', 'Manes.03G110100' => 'mes', 'Manes.04G071100' => 'mes', 'Manes.05G100500' => 'mes', 'Manes.05G164700' => 'mes', 'Manes.15G087000' => 'mes', 'Manes.15G121500' => 'mes', 'Manes.16G028300' => 'mes', 'Manes.17G046100' => 'mes', 'Manes.17G069800' => 'mes', 'Manes.18G100500' => 'mes', 'Mapoly0002s0109' => 'mpo', 'Mapoly0024s0007' => 'mpo', 'Mapoly0089s0032' => 'mpo', 'MBI04_g42241_MAGBIO' => 'mbi', 'MBI05_g11988_MAGBIO' => 'mbi', 'MBI05_g35452_MAGBIO' => 'mbi', 'MBI07_g30179_MAGBIO' => 'mbi', 'MBI07_g35859_MAGBIO' => 'mbi', 'MBI07_g35860_MAGBIO' => 'mbi', 'MBI07_g37166_MAGBIO' => 'mbi', 'MBI08_g18172_MAGBIO' => 'mbi', 'MBI09_g08441_MAGBIO' => 'mbi', 'MBI13_g01676_MAGBIO' => 'mbi', 'MBI14_g42955_MAGBIO' => 'mbi', 'MBI16_g13161_MAGBIO' => 'mbi', 'MBI17_g27204_MAGBIO' => 'mbi', 'MBI19_g21595_MAGBIO' => 'mbi', 'MD00G1148400' => 'mdo', 'MD02G1301200' => 'mdo', 'MD03G1227800' => 'mdo', 'MD05G1041100' => 'mdo', 'MD05G1124800' => 'mdo', 'MD05G1284000' => 'mdo', 'MD05G1338800' => 'mdo', 'MD05G1338900' => 'mdo', 'MD07G1022800' => 'mdo', 'MD10G1047500' => 'mdo', 'MD10G1127500' => 'mdo', 'MD10G1262300' => 'mdo', 'MD10G1293800' => 'mdo', 'MD16G1074300' => 'mdo', 'Medtr1g021670' => 'mtr', 'Medtr1g096320' => 'mtr', 'Medtr2g013690' => 'mtr', 'Medtr2g019450' => 'mtr', 'Medtr2g085170' => 'mtr', 'Medtr4g088785' => 'mtr', 'Medtr8g055930' => 'mtr', 'Medtr8g085850' => 'mtr', 'MELO3C002605.2' => 'cme', 'MELO3C003891.2' => 'cme', 'MELO3C004012.2' => 'cme', 'MELO3C007134.2' => 'cme', 'MELO3C008118.2' => 'cme', 'MELO3C016700.2' => 'cme', 'MELO3C024127.2' => 'cme', 'MELO3C033361.2' => 'cme', 'MELO3C033362.2' => 'cme', 'Migut.C00430' => 'egut', 'Migut.C01246' => 'egut', 'Migut.E00101' => 'egut', 'Migut.H01486' => 'egut', 'Migut.H01939' => 'egut', 'Migut.K00360' => 'egut', 'Migut.M00910' => 'egut', 'Migut.M01139' => 'egut', 'Migut.N02677' => 'egut', 'MSTRG.13252' => 'ama', 'MSTRG.14701' => 'ama', 'MSTRG.1521' => 'ama', 'MSTRG.15884' => 'ama', 'MSTRG.16242' => 'ama', 'MSTRG.22285' => 'ama', 'MSTRG.22444' => 'ama', 'MSTRG.2349' => 'ama', 'MSTRG.26308' => 'ama', 'MSTRG.28296' => 'ama', 'MSTRG.9895' => 'ama', 'Nitab4.5_0000110g0060' => 'nta', 'Nitab4.5_0000420g0130' => 'nta', 'Nitab4.5_0000422g0030' => 'nta', 'Nitab4.5_0000560g0180' => 'nta', 'Nitab4.5_0000703g0100' => 'nta', 'Nitab4.5_0000786g0200' => 'nta', 'Nitab4.5_0001336g0020' => 'nta', 'Nitab4.5_0001796g0030' => 'nta', 'Nitab4.5_0003348g0060' => 'nta', 'Nitab4.5_0003698g0040' => 'nta', 'Nitab4.5_0003942g0090' => 'nta', 'Nitab4.5_0004775g0070' => 'nta', 'Nitab4.5_0004864g0030' => 'nta', 'Nitab4.5_0005615g0020' => 'nta', 'Nitab4.5_0009288g0030' => 'nta', 'Nitab4.5_0009341g0010' => 'nta', 'Nitab4.5_0009535g0010' => 'nta', 'Nn1g03995' => 'nnu', 'Nn1g04100' => 'nnu', 'Nn1g06530' => 'nnu', 'Nn3g16404' => 'nnu', 'Nn3g17212' => 'nnu', 'Nn3g20776' => 'nnu', 'Nn3g21923' => 'nnu', 'Nn5g27737' => 'nnu', 'Nn5g29461' => 'nnu', 'Nn7g38355' => 'nnu', 'Nn8g39873' => 'nnu', 'Oeu000548.2' => 'oeu', 'Oeu004672.1' => 'oeu', 'Oeu015605.2' => 'oeu', 'Oeu016092.1' => 'oeu', 'Oeu017879.3' => 'oeu', 'Oeu024910.1' => 'oeu', 'Oeu028965.1' => 'oeu', 'Oeu031269.1' => 'oeu', 'Oeu031270.1' => 'oeu', 'Oeu032535.1' => 'oeu', 'Oeu034151.1' => 'oeu', 'Oeu034152.1' => 'oeu', 'Oeu034588.2' => 'oeu', 'Oeu050846.1' => 'oeu', 'Oeu050849.2' => 'oeu', 'Oeu051063.2' => 'oeu', 'Oeu052368.1' => 'oeu', 'Oeu052370.1' => 'oeu', 'Os01g0210400' => 'osa', 'Os01g0304300' => 'osa', 'Os01g0749100' => 'osa', 'Os02g0745800' => 'osa', 'Os03g0769050' => 'osa', 'Os05g0531500' => 'osa', 'Os06g0724300' => 'osa', 'Os11g0198100' => 'osa', 'Peaxi162Scf00069g01425' => 'pax', 'Peaxi162Scf00280g00811' => 'pax', 'Peaxi162Scf00310g00615' => 'pax', 'Peaxi162Scf00362g00542' => 'pax', 'Peaxi162Scf00461g00310' => 'pax', 'Peaxi162Scf00530g00118' => 'pax', 'Peaxi162Scf00541g00057' => 'pax', 'Peaxi162Scf00661g00017' => 'pax', 'Peaxi162Scf00926g00027' => 'pax', 'Peaxi162Scf01064g00263' => 'pax', 'Peaxi162Scf01211g00135' => 'pax', 'PGR004G2336' => 'pgr', 'PGR042G0327' => 'pgr', 'PGR042G1957' => 'pgr', 'PGR042G2003' => 'pgr', 'PGR042G3929' => 'pgr', 'PGR083G1137' => 'pgr', 'PGR083G1364' => 'pgr', 'PGSC0003DMG400003381' => 'stu', 'PGSC0003DMG400003417' => 'stu', 'PGSC0003DMG400008981' => 'stu', 'PGSC0003DMG400012417' => 'stu', 'PGSC0003DMG400012823' => 'stu', 'PGSC0003DMG400016885' => 'stu', 'PGSC0003DMG400022812' => 'stu', 'PGSC0003DMG400029726' => 'stu', 'PGSC0003DMG401009243' => 'stu', 'PGSC0003DMG401031505' => 'stu', 'PGSC0003DMG402031505' => 'stu', 'Phvul.001G017600' => 'pvu', 'Phvul.002G193500' => 'pvu', 'Phvul.002G228900' => 'pvu', 'Phvul.002G236800' => 'pvu', 'Phvul.003G049500' => 'pvu', 'Phvul.005G072000' => 'pvu', 'Phvul.006G164800' => 'pvu', 'Phvul.006G185100' => 'pvu', 'Phvul.007G090000' => 'pvu', 'Potri.001G399800' => 'ptr', 'Potri.002G149900' => 'ptr', 'Potri.004G044100' => 'ptr', 'Potri.004G177600' => 'ptr', 'Potri.009G138000' => 'ptr', 'Potri.010G094000' => 'ptr', 'Potri.011G053000' => 'ptr', 'Potri.011G119300' => 'ptr', 'Potri.013G113700' => 'ptr', 'Potri.018G107800' => 'ptr', 'Potri.019G084100' => 'ptr', 'Pp3c14_23720' => 'ppa', 'Pp3c16_6340' => 'ppa', 'Pp3c23_13420' => 'ppa', 'Pp3c24_2740' => 'ppa', 'Pp3c25_860' => 'ppa', 'Pp3c8_21750' => 'ppa', 'Prupe.1G273000' => 'ppe', 'Prupe.1G273700' => 'ppe', 'Prupe.1G274100' => 'ppe', 'Prupe.2G023300' => 'ppe', 'Prupe.4G048000' => 'ppe', 'Prupe.4G080400' => 'ppe', 'Prupe.4G181200' => 'ppe', 'Prupe.8G056900' => 'ppe', 'Prupe.8G168700' => 'ppe', 'Psat1g189080' => 'psa', 'Psat1g204760' => 'psa', 'Psat4g175560' => 'psa', 'Psat4g177720' => 'psa', 'Psat5g244240' => 'psa', 'Psat6g010720' => 'psa', 'Psat6g187200' => 'psa', 'Psat7g072040' => 'psa', 'PSO017G3501' => 'pso', 'PSO063G2148' => 'pso', 'PSO063G5608' => 'pso', 'PSO210G6392' => 'pso', 'PSO541G2319' => 'pso', 'PSO541G2836' => 'pso', 'PSO541G4012' => 'pso', 'PSO541G6253' => 'pso', 'PSO675G0580' => 'pso', 'PSO675G0856' => 'pso', 'PSO675G5635' => 'pso', 'PSO675G9157' => 'pso', 'PSO832G1660' => 'pso', 'PSO832G1969' => 'pso', 'QL02p007186' => 'qlo', 'QL02p033904' => 'qlo', 'QL03p064391' => 'qlo', 'QL05p040593' => 'qlo', 'QL05p058242' => 'qlo', 'QL08p021825' => 'qlo', 'QL11p004981' => 'qlo', 'RcHm_v2.0_Chr1g0318301' => 'rch', 'RcHm_v2.0_Chr4g0418501' => 'rch', 'RcHm_v2.0_Chr4g0439971' => 'rch', 'RcHm_v2.0_Chr5g0008541' => 'rch', 'RcHm_v2.0_Chr5g0014101' => 'rch', 'RcHm_v2.0_Chr5g0014131' => 'rch', 'RcHm_v2.0_Chr5g0033621' => 'rch', 'RcHm_v2.0_Chr6g0272041' => 'rch', 'RcHm_v2.0_Chr6g0278831' => 'rch', 'Rhsim02G0130400' => 'rsi', 'Rhsim02G0171100' => 'rsi', 'Rhsim05G0053000' => 'rsi', 'Rhsim05G0053100' => 'rsi', 'Rhsim06G0096500' => 'rsi', 'Rhsim06G0096600' => 'rsi', 'Rhsim06G0199100' => 'rsi', 'Rhsim12G0062300' => 'rsi', 'Rhsim12G0062800' => 'rsi', 'Sabra02G0118600' => 'sbr', 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'Solyc03g079860.2' => 'sly', 'Solyc04g079770.3' => 'sly', 'Solyc05g007430.4' => 'sly', 'Solyc07g063150.3' => 'sly', 'Solyc08g016620.3' => 'sly', 'Solyc09g057590.3' => 'sly', 'Solyc09g057600.1' => 'sly', 'Solyc10g009050.3' => 'sly', 'Solyc11g017420.2' => 'sly', 'Sopen01g053810' => 'spe', 'Sopen02g023040' => 'spe', 'Sopen03g002440' => 'spe', 'Sopen04g033350' => 'spe', 'Sopen05g003310' => 'spe', 'Sopen07g004050' => 'spe', 'Sopen07g031340' => 'spe', 'Sopen08g006990' => 'spe', 'Sopen10g004830' => 'spe', 'Sopen11g009370' => 'spe', 'Sp1g24450' => 'spa', 'Sp1g29670' => 'spa', 'Sp1g39600' => 'spa', 'Sp2g11080' => 'spa', 'Sp2g13970' => 'spa', 'Sp4g16130' => 'spa', 'Sp6g13080' => 'spa', 'Sp7g37270' => 'spa', 'TAR371G0065' => 'tar', 'TAR376G0340' => 'tar', 'TAR376G0435' => 'tar', 'TAR381G0002' => 'tar', 'TAR381G1236' => 'tar', 'TAR624G0055' => 'tar', 'TAR624G0324' => 'tar', 'TAR624G0696' => 'tar', 'TAR624G0906' => 'tar', 'TAR625G0107' => 'tar', 'TAR626G0015' => 'tar', 'TAR626G1356' => 'tar', 'TAR627G0888' => 'tar', 'TAR628G0399' => 'tar', 'TAR628G1327' => 'tar', 'TAR629G2831' => 'tar', 'TAR629G2874' => 'tar', 'TAR633G1432' => 'tar', 'TAR633G2771' => 'tar', 'THA.LOC104803394' => 'tha', 'THA.LOC104805153' => 'tha', 'THA.LOC104806784' => 'tha', 'THA.LOC104810473' => 'tha', 'THA.LOC104813100' => 'tha', 'THA.LOC104814215' => 'tha', 'THA.LOC104815554' => 'tha', 'THA.LOC104820544' => 'tha', 'THA.LOC104824754' => 'tha', 'THA.LOC104827717' => 'tha', 'Thecc.02G031400' => 'tca', 'Thecc.02G055900' => 'tca', 'Thecc.02G350800' => 'tca', 'Thecc.06G150900' => 'tca', 'Thecc.06G186600' => 'tca', 'Thecc.07G089600' => 'tca', 'Thecc.08G020400' => 'tca', 'Thecc.08G182100' => 'tca', 'Thhalv10000873m.g' => 'esa', 'Thhalv10004185m.g' => 'esa', 'Thhalv10006981m.g' => 'esa', 'Thhalv10007204m.g' => 'esa', 'Thhalv10011374m.g' => 'esa', 'Thhalv10013482m.g' => 'esa', 'Thhalv10017801m.g' => 'esa', 'Thhalv10024983m.g' => 'esa', 'TPR.G12072' => 'tpr', 'TPR.G15769' => 'tpr', 'TPR.G16504' => 'tpr', 'TPR.G16506' => 'tpr', 'TPR.G24345' => 'tpr', 'TPR.G26666' => 'tpr', 'TPR.G27320' => 'tpr', 'TPR.G31819' => 'tpr', 'TPR.G38879' => 'tpr', 'TPR.G39015' => 'tpr', 'TPR.G8819' => 'tpr', 'TWI09G0924' => 'twi', 'TWI12G0811' => 'twi', 'TWI12G1294' => 'twi', 'TWI31G0150' => 'twi', 'TWI36G1262' => 'twi', 'TWI38G1287' => 'twi', 'TWI38G1633' => 'twi', 'TWI38G1982' => 'twi', 'TWI39G0116' => 'twi', 'TWI60G1011' => 'twi', 'TWI63G0171' => 'twi', 'TWI73G0839' => 'twi', 'TWI79G1511' => 'twi', 'unitig_0.g915' => 'ugi', 'unitig_0.g916' => 'ugi', 'unitig_21.g20219' => 'ugi', 'unitig_21.g20416' => 'ugi', 'unitig_578.g16132' => 'ugi', 'unitig_578.g16718' => 'ugi', 'unitig_62.g23481' => 'ugi', 'unitig_744.g24535' => 'ugi', 'unitig_749.g13525' => 'ugi', 'vmacro01248' => 'vma', 'vmacro02290' => 'vma', 'vmacro10946' => 'vma', 'vmacro11865' => 'vma', 'vmacro12493' => 'vma', 'vmacro17322' => 'vma', 'vmacro21599' => 'vma', 'vmacro23041' => 'vma', 'VMungo0251G0004' => 'vmu', 'VMungo0251G2639' => 'vmu', 'VMungo0251G2967' => 'vmu', 'VMungo0540G0864' => 'vmu', 'VMungo0540G1569' => 'vmu', 'VMungo0647G0317' => 'vmu', 'VMungo0720G1373' => 'vmu', 'VMungo0720G1508' => 'vmu', 'VMungo1080G0485' => 'vmu', 'VMungo1215G3177' => 'vmu', 'Zm00001eb112600' => 'zma', 'Zm00001eb120220' => 'zma', 'Zm00001eb153240' => 'zma', 'Zm00001eb168880' => 'zma', 'Zm00001eb213920' => 'zma', 'Zm00001eb228280' => 'zma', 'Zm00001eb254580' => 'zma', 'Zm00001eb272180' => 'zma', 'Zm00001eb293190' => 'zma', 'Zm00001eb322930' => 'zma', 'Zm00001eb353360' => 'zma', 'Zm00001eb353390' => 'zma', 'Zm00001eb353430' => 'zma', 'Zm00001eb353440' => 'zma', 'Zm00001eb353780' => 'zma' ), 'gf_id' => 'HOM05D000499', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000499' ), 'data_identifier' => 'HOM05D000499', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000499', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1066', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p29780' => 'bna', 'A02p33180' => 'bna', 'A03p16470' => 'bna', 'A03p66010' => 'bna', 'A04p25970' => 'bna', 'A06p01270' => 'bna', 'A06p46080' => 'bna', 'A07p11400' => 'bna', 'A08p01840' => 'bna', 'A08p08230' => 'bna', 'A08p25740' => 'bna', 'A09p32070' => 'bna', 'A09p37830' => 'bna', 'A09p42840' => 'bna', 'A09p42850' => 'bna', 'Aa31LG10G2060' => 'aar', 'Aa31LG2G7410' => 'aar', 'Aa31LG6G10200' => 'aar', 'Aa31LG6G16680' => 'aar', 'Aa31LG6G8470' => 'aar', 'Aa31LG9G12730' => 'aar', 'Aa31LG9G13680' => 'aar', 'Aa31LG9G14920' => 'aar', 'Aa31LG9G6650' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4977' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5467' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3254' => 'aag', 'Actinidia02578' => 'ach', 'Actinidia07693' => 'ach', 'Actinidia08413' => 'ach', 'Actinidia08414' => 'ach', 'Actinidia15289' => 'ach', 'Actinidia19871' => 'ach', 'Actinidia21475' => 'ach', 'Actinidia22576' => 'ach', 'Actinidia28327' => 'ach', 'Actinidia32491' => 'ach', 'Actinidia39463' => 'ach', 'Actinidia39571' => 'ach', 'Ah.01g013750' => 'amhyb', 'Ah.01g023210' => 'amhyb', 'Ah.04g164850' => 'amhyb', 'Ah.05g178060' => 'amhyb', 'Ah.07g204270' => 'amhyb', 'Ah.07g208480' => 'amhyb', 'Ah.09g237410' => 'amhyb', 'Ah.14g089460' => 'amhyb', 'AL1G41790' => 'aly', 'AL1G49050' => 'aly', 'AL1G53810' => 'aly', 'AL1G61400' => 'aly', 'AL4G18580' => 'aly', 'AL5G12510' => 'aly', 'AL5G12540' => 'aly', 'AL6G43230' => 'aly', 'AL7G10370' => 'aly', 'AL7G19250' => 'aly', 'AL8G12240' => 'aly', 'AL8G18540' => 'aly', 'Aqoxy1G02409' => 'aox', 'Aqoxy2G03993' => 'aox', 'Aqoxy3G03357' => 'aox', 'Aqoxy4G00785' => 'aox', 'Aqoxy5G02598' => 'aox', 'Aqoxy6G00132' => 'aox', 'Aqoxy7G01776' => 'aox', 'Aqoxy7G02316' => 'aox', 'Aqoxy7G03973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.12AFKW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B8730' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27IQR1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3F75VG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3RE0GA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41TCQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.527VTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FIR39' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5W8UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DA38EV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ63HS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H1I32C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HC27T5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4M8AP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7N3CZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9UVDZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LS1NQA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT1D4B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SKC4TM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCFV76' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF9Q1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQWD9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1ZM88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WE07RT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YCK7VH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJE6Q6' => 'arhy', 'AT1G28240' => 'ath', 'AT1G34550' => 'ath', 'AT1G53040' => 'ath', 'AT2G02910' => 'ath', 'AT4G09630' => 'ath', 'AT4G38500' => 'ath', 'AT5G42660' => 'ath', 'AT5G46220' => 'ath', 'ATR0152G026' => 'atr', 'ATR0564G343' => 'atr', 'ATR0706G151' => 'atr', 'ATR0733G207' => 'atr', 'ATR0751G234' => 'atr', 'ATR0807G048' => 'atr', 'ATR1091G084' => 'atr', 'Atru.chr10.1229' => 'acertr', 'Atru.chr10.1230' => 'acertr', 'Atru.chr10.1874' => 'acertr', 'Atru.chr11.1808' => 'acertr', 'Atru.chr13.1795' => 'acertr', 'Atru.chr13.570' => 'acertr', 'Atru.chr2.2608' => 'acertr', 'Atru.chr2.2609' => 'acertr', 'Atru.chr5.3428' => 'acertr', 'Atru.chr8.1171' => 'acertr', 'AUR62004651' => 'cqu', 'AUR62008675' => 'cqu', 'AUR62010014' => 'cqu', 'AUR62013004' => 'cqu', 'AUR62014825' => 'cqu', 'AUR62015015' => 'cqu', 'AUR62015151' => 'cqu', 'AUR62017020' => 'cqu', 'AUR62019422' => 'cqu', 'AUR62023570' => 'cqu', 'AUR62025571' => 'cqu', 'AUR62029098' => 'cqu', 'AUR62033863' => 'cqu', 'AUR62034296' => 'cqu', 'AUR62040075' => 'cqu', 'BcaB02g07334' => 'bca', 'BcaB02g10575' => 'bca', 'BcaB03g12119' => 'bca', 'BcaB03g12120' => 'bca', 'BcaB03g13945' => 'bca', 'BcaB04g17123' => 'bca', 'BcaB04g17867' => 'bca', 'BcaB04g19839' => 'bca', 'BcaB07g30317' => 'bca', 'BcaB07g32432' => 'bca', 'BcaB07g33362' => 'bca', 'BcaB08g36611' => 'bca', 'BcaC01g00028' => 'bca', 'BcaC01g01356' => 'bca', 'BcaC01g02034' => 'bca', 'BcaC01g06051' => 'bca', 'BcaC03g16839' => 'bca', 'BcaC03g17176' => 'bca', 'BcaC05g26829' => 'bca', 'BcaC06g31490' => 'bca', 'BcaC06g35344' => 'bca', 'BcaC06g36570' => 'bca', 'BcaC07g37537' => 'bca', 'BcaC08g43491' => 'bca', 'BcaC08g43773' => 'bca', 'BcaNung00234' => 'bca', 'BcaNung01982' => 'bca', 'BcaNung03707' => 'bca', 'BcaNung06454' => 'bca', 'BolC2t10762H' => 'bol', 'BolC2t11191H' => 'bol', 'BolC3t14322H' => 'bol', 'BolC3t19747H' => 'bol', 'BolC3t21425H' => 'bol', 'BolC4t27800H' => 'bol', 'BolC5t31423H' => 'bol', 'BolC6t35951H' => 'bol', 'BolC6t36282H' => 'bol', 'BolC7t40678H' => 'bol', 'BolC7t40679H' => 'bol', 'BolC7t42222H' => 'bol', 'BolC7t43492H' => 'bol', 'BolC7t46785H' => 'bol', 'BolC8t47853H' => 'bol', 'BolC9t56805H' => 'bol', 'BraA02t08000Z' => 'bra', 'BraA02t08341Z' => 'bra', 'BraA03t10936Z' => 'bra', 'BraA03t15657Z' => 'bra', 'BraA04t18100Z' => 'bra', 'BraA05t20523Z' => 'bra', 'BraA06t23353Z' => 'bra', 'BraA06t27473Z' => 'bra', 'BraA06t27769Z' => 'bra', 'BraA07t28928Z' => 'bra', 'BraA08t32236Z' => 'bra', 'BraA08t32841Z' => 'bra', 'BraA08t34524Z' => 'bra', 'BraA09t38742Z' => 'bra', 'BraA09t39295Z' => 'bra', 'C02p47180' => 'bna', 'C02p50990' => 'bna', 'C03p19360' => 'bna', 'C03p74950' => 'bna', 'C03p91000' => 'bna', 'C04p63260' => 'bna', 'C05p27050' => 'bna', 'C06p08750' => 'bna', 'C06p11490' => 'bna', 'C07p02820' => 'bna', 'C07p17180' => 'bna', 'C07p29440' => 'bna', 'C07p63730' => 'bna', 'C09p39260' => 'bna', 'CAN.G1164.34' => 'can', 'CAN.G1164.39' => 'can', 'CAN.G1530.3' => 'can', 'CAN.G162.61' => 'can', 'CAN.G176.6' => 'can', 'CAN.G289.49' => 'can', 'CAN.G370.21' => 'can', 'CAN.G370.22' => 'can', 'CAN.G371.117' => 'can', 'CAN.G58.37' => 'can', 'CAN.G588.98' => 'can', 'CANSAT21G2266' => 'cansat', 'CANSAT25G2799' => 'cansat', 'CANSAT35G0862' => 'cansat', 'CANSAT35G1704' => 'cansat', 'CANSAT35G1760' => 'cansat', 'CANSAT56G3971' => 'cansat', 'CANSAT56G4116' => 'cansat', 'CANSAT80G1259' => 'cansat', 'CARHR027730' => 'chi', 'CARHR033880' => 'chi', 'CARHR043270' => 'chi', 'CARHR145330' => 'chi', 'CARHR145340' => 'chi', 'CARHR175570' => 'chi', 'CARHR181570' => 'chi', 'CARHR258470' => 'chi', 'CARHR260490' => 'chi', 'CARHR294220' => 'chi', 'Carub.0001s2668' => 'cru', 'Carub.0001s3257' => 'cru', 'Carub.0001s4220' => 'cru', 'Carub.0005s0179' => 'cru', 'Carub.0006s2807' => 'cru', 'Carub.0007s0039' => 'cru', 'Carub.0008s0169' => 'cru', 'Carub.0008s0636' => 'cru', 'Ca_00338_v3' => 'car', 'Ca_00542_v3' => 'car', 'Ca_01844_v3' => 'car', 'Ca_10611_v3' => 'car', 'Ca_13326_v3' => 'car', 'Ca_17944_v3' => 'car', 'Ca_18546_v3' => 'car', 'Ca_24219_v3' => 'car', 'Ca_29972_v3' => 'car', 'CBR_g3681' => 'cbr', 'CBR_g40021' => 'cbr', 'Cc01_g08140' => 'ccan', 'Cc02_g13410' => 'ccan', 'Cc02_g37480' => 'ccan', 'Cc05_g12030' => 'ccan', 'Cc09_g03370' => 'ccan', 'Cc09_g10300' => 'ccan', 'Cc10_g03530' => 'ccan', 'Cc10_g11380' => 'ccan', 'CDE01G0176' => 'cde', 'CDE02G0675' => 'cde', 'CDE02G0942' => 'cde', 'CDE02G1153' => 'cde', 'CDE02G4177' => 'cde', 'CDE04G2117' => 'cde', 'CDE04G2736' => 'cde', 'CDE08G1161' => 'cde', 'CDE09G1238' => 'cde', 'Cfa000467' => 'cfa', 'Cfa000947' => 'cfa', 'Cfa004969' => 'cfa', 'Cfa005284' => 'cfa', 'Cfa008993' => 'cfa', 'Cfa018187' => 'cfa', 'Cfa018454' => 'cfa', 'Cfa020585' => 'cfa', 'Ciclev10000424m.g' => 'ccl', 'Ciclev10003605m.g' => 'ccl', 'Ciclev10007828m.g' => 'ccl', 'Ciclev10014620m.g' => 'ccl', 'Ciclev10015169m.g' => 'ccl', 'Ciclev10018291m.g' => 'ccl', 'Ciclev10028256m.g' => 'ccl', 'Ciclev10033822m.g' => 'ccl', 'CiPaw.05G060300' => 'cil', 'CiPaw.05G085000' => 'cil', 'CiPaw.06G083700' => 'cil', 'CiPaw.06G120300' => 'cil', 'CiPaw.09G060500' => 'cil', 'CiPaw.09G123800' => 'cil', 'CiPaw.11G169700' => 'cil', 'CiPaw.12G118300' => 'cil', 'CiPaw.15G071000' => 'cil', 'CiPaw.15G081900' => 'cil', 'ClCG01G024610' => 'cla', 'ClCG03G006070' => 'cla', 'ClCG05G019250' => 'cla', 'ClCG09G009500' => 'cla', 'ClCG11G008200' => 'cla', 'ClCG11G018080' => 'cla', 'COL.COLO4_17373' => 'col', 'COL.COLO4_22994' => 'col', 'COL.COLO4_26389' => 'col', 'COL.COLO4_27170' => 'col', 'COL.COLO4_31074' => 'col', 'COL.COLO4_31465' => 'col', 'COL.COLO4_36438' => 'col', 'COL.COLO4_36439' => 'col', 'Cpa.g.c38781' => 'cpa', 'Cpa.g.sc128.12' => 'cpa', 'Cpa.g.sc166.7' => 'cpa', 'Cpa.g.sc166.8' => 'cpa', 'Cpa.g.sc20.111' => 'cpa', 'Cpa.g.sc27.31' => 'cpa', 'Cpa.g.sc64.36' => 'cpa', 'Cpa.g.sc64.37' => 'cpa', 'Cpa.g.sc66.49' => 'cpa', 'Cpa.g.sc80.64' => 'cpa', 'CsaV3_1G012320' => 'csa', 'CsaV3_2G008480' => 'csa', 'CsaV3_2G033450' => 'csa', 'CsaV3_3G044830' => 'csa', 'CsaV3_4G033710' => 'csa', 'CsaV3_6G051730' => 'csa', 'CsaV3_7G025350' => 'csa', 'CSS0001067' => 'camsi', 'CSS0005996' => 'camsi', 'CSS0006590' => 'camsi', 'CSS0009673' => 'camsi', 'CSS0010201' => 'camsi', 'CSS0010549' => 'camsi', 'CSS0011364' => 'camsi', 'CSS0014473' => 'camsi', 'CSS0014961' => 'camsi', 'CSS0020191' => 'camsi', 'CSS0021165' => 'camsi', 'CSS0022306' => 'camsi', 'CSS0030591' => 'camsi', 'CSS0030696' => 'camsi', 'CSS0032653' => 'camsi', 'CSS0037487' => 'camsi', 'CSS0041102' => 'camsi', 'CSS0041261' => 'camsi', 'CSS0046246' => 'camsi', 'CSS0049256' => 'camsi', 'DCAR_004075' => 'dca', 'DCAR_011538' => 'dca', 'DCAR_019553' => 'dca', 'DCAR_020952' => 'dca', 'DCAR_021739' => 'dca', 'DCAR_027407' => 'dca', 'DCAR_027913' => 'dca', 'DCAR_028066' => 'dca', 'Dinv05899' => 'din', 'Dinv07563' => 'din', 'Dinv08010' => 'din', 'Dinv14125' => 'din', 'Dinv20172' => 'din', 'Dinv30743' => 'din', 'Dinv31229' => 'din', 'Dinv34162' => 'din', 'Dinv36028' => 'din', 'Dinv39368' => 'din', 'Dinv40565' => 'din', 'Dinv41706' => 'din', 'Duzib052G0089' => 'dzi', 'Duzib116G0641' => 'dzi', 'Duzib132G0069' => 'dzi', 'Duzib132G1219' => 'dzi', 'Duzib147G0278' => 'dzi', 'Duzib160G0480' => 'dzi', 'Duzib170G0661' => 'dzi', 'Duzib177G0591' => 'dzi', 'Duzib187G1353' => 'dzi', 'Duzib192G0858' => 'dzi', 'Duzib192G0883' => 'dzi', 'Duzib213G0506' => 'dzi', 'Duzib235G0289' => 'dzi', 'Duzib251G0422' => 'dzi', 'ECA232G3898' => 'eca', 'ECA233G5950' => 'eca', 'ECA234G1699' => 'eca', 'ECA234G2421' => 'eca', 'ECA236G0426' => 'eca', 'ECA236G4331' => 'eca', 'ECA248G2573' => 'eca', 'EL10Ac1g00077' => 'bvu', 'EL10Ac1g01746' => 'bvu', 'EL10Ac2g03464' => 'bvu', 'EL10Ac4g08176' => 'bvu', 'EL10Ac7g17521' => 'bvu', 'EL10Ac8g20386' => 'bvu', 'EL10Ac9g21343' => 'bvu', 'EL10Ac9g22688' => 'bvu', 'Eucgr.B03434' => 'egr', 'Eucgr.D00618' => 'egr', 'Eucgr.E02395' => 'egr', 'Eucgr.F01129' => 'egr', 'Eucgr.F02622' => 'egr', 'Eucgr.F04207' => 'egr', 'FAN01G0570' => 'fan', 'FAN03G3351' => 'fan', 'FAN06G3702' => 'fan', 'FAN07G2149' => 'fan', 'FAN10G3758' => 'fan', 'FAN11G1170' => 'fan', 'FAN11G2050' => 'fan', 'FAN11G2724' => 'fan', 'FAN12G1700' => 'fan', 'FAN12G2028' => 'fan', 'FAN15G1160' => 'fan', 'FAN15G3063' => 'fan', 'FAN16G2540' => 'fan', 'FAN16G3077' => 'fan', 'FAN16G3624' => 'fan', 'FAN17G0221' => 'fan', 'FAN20G2492' => 'fan', 'FAN20G2905' => 'fan', 'FAN21G0548' => 'fan', 'FAN21G1300' => 'fan', 'FAN22G0077' => 'fan', 'FAN22G1315' => 'fan', 'FAN24G1280' => 'fan', 'FAN24G1445' => 'fan', 'FAN24G3527' => 'fan', 'FAN25G0464' => 'fan', 'FAN25G2885' => 'fan', 'FAN25G3270' => 'fan', 'FAN27G1101' => 'fan', 'FAN27G2846' => 'fan', 'FAN27G3524' => 'fan', 'FvH4_2g11770' => 'fve', 'FvH4_2g15630' => 'fve', 'FvH4_3g05570' => 'fve', 'FvH4_3g09110' => 'fve', 'FvH4_3g19940' => 'fve', 'FvH4_4g04821' => 'fve', 'FvH4_4g31480' => 'fve', 'FvH4_7g01740' => 'fve', 'Glyma.05G130400' => 'gma', 'Glyma.05G156400' => 'gma', 'Glyma.07G197000' => 'gma', 'Glyma.08G085151' => 'gma', 'Glyma.08G114500' => 'gma', 'Glyma.08G300400' => 'gma', 'Glyma.10G215800' => 'gma', 'Glyma.12G224400' => 'gma', 'Glyma.13G179300' => 'gma', 'Glyma.13G218151' => 'gma', 'Glyma.13G238800' => 'gma', 'Glyma.13G276900' => 'gma', 'Glyma.14G078200' => 'gma', 'Glyma.15G074500' => 'gma', 'Glyma.15G094100' => 'gma', 'Glyma.17G247200' => 'gma', 'Glyma.18G120100' => 'gma', 'Glyma.20G176000' => 'gma', 'Gohir.A01G063600' => 'ghi', 'Gohir.A01G170301' => 'ghi', 'Gohir.A02G060500' => 'ghi', 'Gohir.A05G133850' => 'ghi', 'Gohir.A05G161400' => 'ghi', 'Gohir.A06G012900' => 'ghi', 'Gohir.A06G035901' => 'ghi', 'Gohir.A06G127100' => 'ghi', 'Gohir.A06G210500' => 'ghi', 'Gohir.A08G008650' => 'ghi', 'Gohir.A09G072700' => 'ghi', 'Gohir.A09G088301' => 'ghi', 'Gohir.A10G040600' => 'ghi', 'Gohir.A12G036300' => 'ghi', 'Gohir.A12G143350' => 'ghi', 'Gohir.A12G165500' => 'ghi', 'Gohir.A13G145700' => 'ghi', 'Gohir.D01G050000' => 'ghi', 'Gohir.D01G051366' => 'ghi', 'Gohir.D01G161350' => 'ghi', 'Gohir.D02G065900' => 'ghi', 'Gohir.D05G164200' => 'ghi', 'Gohir.D05G355500' => 'ghi', 'Gohir.D06G010400' => 'ghi', 'Gohir.D06G111250' => 'ghi', 'Gohir.D06G132000' => 'ghi', 'Gohir.D06G210500' => 'ghi', 'Gohir.D07G165675' => 'ghi', 'Gohir.D08G062240' => 'ghi', 'Gohir.D08G086101' => 'ghi', 'Gohir.D08G138060' => 'ghi', 'Gohir.D09G072300' => 'ghi', 'Gohir.D10G041400' => 'ghi', 'Gohir.D11G191020' => 'ghi', 'Gohir.D11G212066' => 'ghi', 'Gohir.D12G036300' => 'ghi', 'Gohir.D12G168600' => 'ghi', 'Gohir.D13G150600' => 'ghi', 'Gorai.001G057300' => 'gra', 'Gorai.002G069900' => 'gra', 'Gorai.002G200000' => 'gra', 'Gorai.003G067600' => 'gra', 'Gorai.005G074800' => 'gra', 'Gorai.006G087300' => 'gra', 'Gorai.008G037500' => 'gra', 'Gorai.008G181400' => 'gra', 'Gorai.009G169400' => 'gra', 'Gorai.009G387900' => 'gra', 'Gorai.010G013300' => 'gra', 'Gorai.010G153800' => 'gra', 'Gorai.010G255800' => 'gra', 'Gorai.011G043700' => 'gra', 'Gorai.011G198900' => 'gra', 'Gorai.013G168400' => 'gra', 'GSVIVG01005212001' => 'vvi', 'GSVIVG01006163001' => 'vvi', 'GSVIVG01009625001' => 'vvi', 'GSVIVG01014338001' => 'vvi', 'GSVIVG01020005001' => 'vvi', 'GSVIVG01021450001' => 'vvi', 'GSVIVG01023975001' => 'vvi', 'GSVIVG01034490001' => 'vvi', 'HanXRQChr04g0112071' => 'han', 'HanXRQChr05g0131151' => 'han', 'HanXRQChr09g0262371' => 'han', 'HanXRQChr09g0268401' => 'han', 'HanXRQChr10g0279241' => 'han', 'HanXRQChr10g0297961' => 'han', 'HanXRQChr11g0326231' => 'han', 'HanXRQChr11g0328471' => 'han', 'HanXRQChr16g0507941' => 'han', 'HanXRQChr17g0560211' => 'han', 'Haze_02108' => 'cav', 'Haze_02428' => 'cav', 'Haze_05593' => 'cav', 'Haze_06448' => 'cav', 'Haze_09427' => 'cav', 'Haze_12022' => 'cav', 'Haze_17612' => 'cav', 'Haze_17928' => 'cav', 'Hma1.2p1_0032F.1_g019250' => 'hma', 'Hma1.2p1_0163F.1_g072690' => 'hma', 'Hma1.2p1_0265F.1_g106710' => 'hma', 'Hma1.2p1_0286F.1_g113970' => 'hma', 'Hma1.2p1_0363F.1_g136640' => 'hma', 'Hma1.2p1_0584F.1_g183470' => 'hma', 'Hma1.2p1_0885F.1_g232570' => 'hma', 'HPP92_006022' => 'vpl', 'HPP92_007320' => 'vpl', 'HPP92_011521' => 'vpl', 'HPP92_019387' => 'vpl', 'HPP92_024038' => 'vpl', 'Hund05891' => 'sun', 'Hund06450' => 'sun', 'Hund12053' => 'sun', 'Hund16800' => 'sun', 'Hund21222' => 'sun', 'Hund22896' => 'sun', 'Hund23746' => 'sun', 'Hund27083' => 'sun', 'Lalb_Chr02g0141831' => 'lal', 'Lalb_Chr02g0141841' => 'lal', 'Lalb_Chr05g0220411' => 'lal', 'Lalb_Chr06g0162081' => 'lal', 'Lalb_Chr09g0327651' => 'lal', 'Lalb_Chr13g0295051' => 'lal', 'Lalb_Chr15g0086801' => 'lal', 'Lalb_Chr16g0383781' => 'lal', 'Lalb_Chr16g0383791' => 'lal', 'Lalb_Chr18g0055441' => 'lal', 'Lalb_Chr18g0059611' => 'lal', 'Lalb_Chr20g0109661' => 'lal', 'Lalb_Chr20g0109831' => 'lal', 'Lalb_Chr20g0121871' => 'lal', 'Lalb_Chr22g0355361' => 'lal', 'Lalb_Chr25g0286371' => 'lal', 'Lj1A1187G43' => 'lonja', 'Lj1A1205T50' => 'lonja', 'Lj1A800G33' => 'lonja', 'Lj1C1187T7' => 'lonja', 'Lj1C843T11' => 'lonja', 'Lj1g0010940' => 'lja', 'Lj2A288T69' => 'lonja', 'Lj3g0024276' => 'lja', 'Lj4A47T76' => 'lonja', 'Lj4g0005805' => 'lja', 'Lj4g0006097' => 'lja', 'Lj4g0008528' => 'lja', 'Lj4g0024907' => 'lja', 'Lj5g0012472' => 'lja', 'Lj5g0018648' => 'lja', 'Lj6C789G1' => 'lonja', 'Lj6g0004000' => 'lja', 'Lj7A292G67' => 'lonja', 'Lj7A292T64' => 'lonja', 'Lj9A400T58' => 'lonja', 'Lsat_1_v5_gn_1_126181' => 'lsa', 'Lsat_1_v5_gn_4_123041' => 'lsa', 'Lsat_1_v5_gn_4_133620' => 'lsa', 'Lsat_1_v5_gn_4_53221' => 'lsa', 'Lsat_1_v5_gn_4_71961' => 'lsa', 'Lsat_1_v5_gn_7_105241' => 'lsa', 'Lsat_1_v5_gn_7_21361' => 'lsa', 'Lsat_1_v5_gn_7_28860' => 'lsa', 'Lsat_1_v5_gn_7_31260' => 'lsa', 'Lsat_1_v5_gn_8_52801' => 'lsa', 'Manes.02G191400' => 'mes', 'Manes.03G110100' => 'mes', 'Manes.04G071100' => 'mes', 'Manes.05G100500' => 'mes', 'Manes.05G164700' => 'mes', 'Manes.15G087000' => 'mes', 'Manes.15G121500' => 'mes', 'Manes.16G028300' => 'mes', 'Manes.17G046100' => 'mes', 'Manes.17G069800' => 'mes', 'Manes.18G100500' => 'mes', 'Mapoly0002s0109' => 'mpo', 'Mapoly0024s0007' => 'mpo', 'Mapoly0089s0032' => 'mpo', 'MBI04_g42241_MAGBIO' => 'mbi', 'MBI05_g11988_MAGBIO' => 'mbi', 'MBI05_g35452_MAGBIO' => 'mbi', 'MBI07_g30179_MAGBIO' => 'mbi', 'MBI07_g35859_MAGBIO' => 'mbi', 'MBI07_g35860_MAGBIO' => 'mbi', 'MBI07_g37166_MAGBIO' => 'mbi', 'MBI08_g18172_MAGBIO' => 'mbi', 'MBI09_g08441_MAGBIO' => 'mbi', 'MBI13_g01676_MAGBIO' => 'mbi', 'MBI14_g42955_MAGBIO' => 'mbi', 'MBI16_g13161_MAGBIO' => 'mbi', 'MBI17_g27204_MAGBIO' => 'mbi', 'MBI19_g21595_MAGBIO' => 'mbi', 'MD00G1148400' => 'mdo', 'MD02G1301200' => 'mdo', 'MD03G1227800' => 'mdo', 'MD05G1041100' => 'mdo', 'MD05G1124800' => 'mdo', 'MD05G1284000' => 'mdo', 'MD05G1338800' => 'mdo', 'MD05G1338900' => 'mdo', 'MD07G1022800' => 'mdo', 'MD10G1047500' => 'mdo', 'MD10G1127500' => 'mdo', 'MD10G1262300' => 'mdo', 'MD10G1293800' => 'mdo', 'MD16G1074300' => 'mdo', 'Medtr1g021670' => 'mtr', 'Medtr1g096320' => 'mtr', 'Medtr2g013690' => 'mtr', 'Medtr2g019450' => 'mtr', 'Medtr2g085170' => 'mtr', 'Medtr4g088785' => 'mtr', 'Medtr8g055930' => 'mtr', 'Medtr8g085850' => 'mtr', 'MELO3C002605.2' => 'cme', 'MELO3C003891.2' => 'cme', 'MELO3C004012.2' => 'cme', 'MELO3C007134.2' => 'cme', 'MELO3C008118.2' => 'cme', 'MELO3C016700.2' => 'cme', 'MELO3C024127.2' => 'cme', 'MELO3C033361.2' => 'cme', 'MELO3C033362.2' => 'cme', 'Migut.C00430' => 'egut', 'Migut.C01246' => 'egut', 'Migut.E00101' => 'egut', 'Migut.H01486' => 'egut', 'Migut.H01939' => 'egut', 'Migut.K00360' => 'egut', 'Migut.M00910' => 'egut', 'Migut.M01139' => 'egut', 'Migut.N02677' => 'egut', 'MSTRG.13252' => 'ama', 'MSTRG.14701' => 'ama', 'MSTRG.1521' => 'ama', 'MSTRG.15884' => 'ama', 'MSTRG.16242' => 'ama', 'MSTRG.22285' => 'ama', 'MSTRG.22444' => 'ama', 'MSTRG.2349' => 'ama', 'MSTRG.26308' => 'ama', 'MSTRG.28296' => 'ama', 'MSTRG.9895' => 'ama', 'Nitab4.5_0000110g0060' => 'nta', 'Nitab4.5_0000420g0130' => 'nta', 'Nitab4.5_0000422g0030' => 'nta', 'Nitab4.5_0000560g0180' => 'nta', 'Nitab4.5_0000703g0100' => 'nta', 'Nitab4.5_0000786g0200' => 'nta', 'Nitab4.5_0001336g0020' => 'nta', 'Nitab4.5_0001796g0030' => 'nta', 'Nitab4.5_0003348g0060' => 'nta', 'Nitab4.5_0003698g0040' => 'nta', 'Nitab4.5_0003942g0090' => 'nta', 'Nitab4.5_0004775g0070' => 'nta', 'Nitab4.5_0004864g0030' => 'nta', 'Nitab4.5_0005615g0020' => 'nta', 'Nitab4.5_0009288g0030' => 'nta', 'Nitab4.5_0009341g0010' => 'nta', 'Nitab4.5_0009535g0010' => 'nta', 'Nn1g03995' => 'nnu', 'Nn1g04100' => 'nnu', 'Nn1g06530' => 'nnu', 'Nn3g16404' => 'nnu', 'Nn3g17212' => 'nnu', 'Nn3g20776' => 'nnu', 'Nn3g21923' => 'nnu', 'Nn5g27737' => 'nnu', 'Nn5g29461' => 'nnu', 'Nn7g38355' => 'nnu', 'Nn8g39873' => 'nnu', 'Oeu000548.2' => 'oeu', 'Oeu004672.1' => 'oeu', 'Oeu015605.2' => 'oeu', 'Oeu016092.1' => 'oeu', 'Oeu017879.3' => 'oeu', 'Oeu024910.1' => 'oeu', 'Oeu028965.1' => 'oeu', 'Oeu031269.1' => 'oeu', 'Oeu031270.1' => 'oeu', 'Oeu032535.1' => 'oeu', 'Oeu034151.1' => 'oeu', 'Oeu034152.1' => 'oeu', 'Oeu034588.2' => 'oeu', 'Oeu050846.1' => 'oeu', 'Oeu050849.2' => 'oeu', 'Oeu051063.2' => 'oeu', 'Oeu052368.1' => 'oeu', 'Oeu052370.1' => 'oeu', 'Os01g0210400' => 'osa', 'Os01g0304300' => 'osa', 'Os01g0749100' => 'osa', 'Os02g0745800' => 'osa', 'Os03g0769050' => 'osa', 'Os05g0531500' => 'osa', 'Os06g0724300' => 'osa', 'Os11g0198100' => 'osa', 'Peaxi162Scf00069g01425' => 'pax', 'Peaxi162Scf00280g00811' => 'pax', 'Peaxi162Scf00310g00615' => 'pax', 'Peaxi162Scf00362g00542' => 'pax', 'Peaxi162Scf00461g00310' => 'pax', 'Peaxi162Scf00530g00118' => 'pax', 'Peaxi162Scf00541g00057' => 'pax', 'Peaxi162Scf00661g00017' => 'pax', 'Peaxi162Scf00926g00027' => 'pax', 'Peaxi162Scf01064g00263' => 'pax', 'Peaxi162Scf01211g00135' => 'pax', 'PGR004G2336' => 'pgr', 'PGR042G0327' => 'pgr', 'PGR042G1957' => 'pgr', 'PGR042G2003' => 'pgr', 'PGR042G3929' => 'pgr', 'PGR083G1137' => 'pgr', 'PGR083G1364' => 'pgr', 'PGSC0003DMG400003381' => 'stu', 'PGSC0003DMG400003417' => 'stu', 'PGSC0003DMG400008981' => 'stu', 'PGSC0003DMG400012417' => 'stu', 'PGSC0003DMG400012823' => 'stu', 'PGSC0003DMG400016885' => 'stu', 'PGSC0003DMG400022812' => 'stu', 'PGSC0003DMG400029726' => 'stu', 'PGSC0003DMG401009243' => 'stu', 'PGSC0003DMG401031505' => 'stu', 'PGSC0003DMG402031505' => 'stu', 'Phvul.001G017600' => 'pvu', 'Phvul.002G193500' => 'pvu', 'Phvul.002G228900' => 'pvu', 'Phvul.002G236800' => 'pvu', 'Phvul.003G049500' => 'pvu', 'Phvul.005G072000' => 'pvu', 'Phvul.006G164800' => 'pvu', 'Phvul.006G185100' => 'pvu', 'Phvul.007G090000' => 'pvu', 'Potri.001G399800' => 'ptr', 'Potri.002G149900' => 'ptr', 'Potri.004G044100' => 'ptr', 'Potri.004G177600' => 'ptr', 'Potri.009G138000' => 'ptr', 'Potri.010G094000' => 'ptr', 'Potri.011G053000' => 'ptr', 'Potri.011G119300' => 'ptr', 'Potri.013G113700' => 'ptr', 'Potri.018G107800' => 'ptr', 'Potri.019G084100' => 'ptr', 'Pp3c14_23720' => 'ppa', 'Pp3c16_6340' => 'ppa', 'Pp3c23_13420' => 'ppa', 'Pp3c24_2740' => 'ppa', 'Pp3c25_860' => 'ppa', 'Pp3c8_21750' => 'ppa', 'Prupe.1G273000' => 'ppe', 'Prupe.1G273700' => 'ppe', 'Prupe.1G274100' => 'ppe', 'Prupe.2G023300' => 'ppe', 'Prupe.4G048000' => 'ppe', 'Prupe.4G080400' => 'ppe', 'Prupe.4G181200' => 'ppe', 'Prupe.8G056900' => 'ppe', 'Prupe.8G168700' => 'ppe', 'Psat1g189080' => 'psa', 'Psat1g204760' => 'psa', 'Psat4g175560' => 'psa', 'Psat4g177720' => 'psa', 'Psat5g244240' => 'psa', 'Psat6g010720' => 'psa', 'Psat6g187200' => 'psa', 'Psat7g072040' => 'psa', 'PSO017G3501' => 'pso', 'PSO063G2148' => 'pso', 'PSO063G5608' => 'pso', 'PSO210G6392' => 'pso', 'PSO541G2319' => 'pso', 'PSO541G2836' => 'pso', 'PSO541G4012' => 'pso', 'PSO541G6253' => 'pso', 'PSO675G0580' => 'pso', 'PSO675G0856' => 'pso', 'PSO675G5635' => 'pso', 'PSO675G9157' => 'pso', 'PSO832G1660' => 'pso', 'PSO832G1969' => 'pso', 'QL02p007186' => 'qlo', 'QL02p033904' => 'qlo', 'QL03p064391' => 'qlo', 'QL05p040593' => 'qlo', 'QL05p058242' => 'qlo', 'QL08p021825' => 'qlo', 'QL11p004981' => 'qlo', 'RcHm_v2.0_Chr1g0318301' => 'rch', 'RcHm_v2.0_Chr4g0418501' => 'rch', 'RcHm_v2.0_Chr4g0439971' => 'rch', 'RcHm_v2.0_Chr5g0008541' => 'rch', 'RcHm_v2.0_Chr5g0014101' => 'rch', 'RcHm_v2.0_Chr5g0014131' => 'rch', 'RcHm_v2.0_Chr5g0033621' => 'rch', 'RcHm_v2.0_Chr6g0272041' => 'rch', 'RcHm_v2.0_Chr6g0278831' => 'rch', 'Rhsim02G0130400' => 'rsi', 'Rhsim02G0171100' => 'rsi', 'Rhsim05G0053000' => 'rsi', 'Rhsim05G0053100' => 'rsi', 'Rhsim06G0096500' => 'rsi', 'Rhsim06G0096600' => 'rsi', 'Rhsim06G0199100' => 'rsi', 'Rhsim12G0062300' => 'rsi', 'Rhsim12G0062800' => 'rsi', 'Sabra02G0118600' => 'sbr', 'Sabra04G0027300' => 'sbr', 'Sabra04G0119500' => 'sbr', 'Sabra08G0112500' => 'sbr', 'Sabra11G0036800' => 'sbr', 'Sabra11G0103800' => 'sbr', 'Sabra13G0096300' => 'sbr', 'Sabra16G0262300' => 'sbr', 'Sabra18G0091700' => 'sbr', 'Sabra19G0095400' => 'sbr', 'SalBow6G3080' => 'sbo', 'SalBow7G1157' => 'sbo', 'SalBow7G2123' => 'sbo', 'SalBow7G2285' => 'sbo', 'SalBow7G3537' => 'sbo', 'SalBow8G2947' => 'sbo', 'SalBow8G4463' => 'sbo', 'SalBow8G5466' => 'sbo', 'Sc01g0001750' => 'sci', 'Sc02g0006640' => 'sci', 'Sc02g0006670' => 'sci', 'Sc04g0008220' => 'sci', 'Sc05g0006190' => 'sci', 'Sc08g0002760' => 'sci', 'Sc17g0006170' => 'sci', 'Sc22g0002050' => 'sci', 'Sc23g0001190' => 'sci', 'Sc24g0000980' => 'sci', 'Sed0006245' => 'sed', 'Sed0007543' => 'sed', 'Sed0009411' => 'sed', 'Sed0010765' => 'sed', 'Sed0012944' => 'sed', 'Sed0014682' => 'sed', 'Sed0016174' => 'sed', 'Sed0016796' => 'sed', 'Sed0020317' => 'sed', 'Sed0021467' => 'sed', 'SEGI_01316' => 'sgi', 'SEGI_03374' => 'sgi', 'SEGI_16265' => 'sgi', 'SEGI_18569' => 'sgi', 'SEGI_20351' => 'sgi', 'SEGI_26395' => 'sgi', 'SEGI_29469' => 'sgi', 'SEGI_34771' => 'sgi', 'SEGI_36769' => 'sgi', 'SEGI_37139' => 'sgi', 'SGA_v2.0_scaffold100G29687' => 'sas', 'SGA_v2.0_scaffold118G32472' => 'sas', 'SGA_v2.0_scaffold14G07051' => 'sas', 'SGA_v2.0_scaffold183G39845' => 'sas', 'SGA_v2.0_scaffold1G00174' => 'sas', 'SGA_v2.0_scaffold22G09714' => 'sas', 'SGA_v2.0_scaffold333G48992' => 'sas', 'SGA_v2.0_scaffold46G17491' => 'sas', 'SGA_v2.0_scaffold49G18294' => 'sas', 'SGA_v2.0_scaffold63G21658' => 'sas', 'SHI01741' => 'shi', 'SHI05771' => 'shi', 'SHI18077' => 'shi', 'SHI20525' => 'shi', 'SHI20527' => 'shi', 'SHI20528' => 'shi', 'SMO172G0185' => 'smo', 'SMO198G0020' => 'smo', 'SMO351G0006' => 'smo', 'SMO356G0118' => 'smo', 'SMO358G0296' => 'smo', 'SMO367G0079' => 'smo', 'SMO367G1277' => 'smo', 'Solyc01g014220.3' => 'sly', 'Solyc01g111770.2' => 'sly', 'Solyc02g078180.3' => 'sly', 'Solyc03g006430.3' => 'sly', 'Solyc03g006456.1' => 'sly', 'Solyc03g079860.2' => 'sly', 'Solyc04g079770.3' => 'sly', 'Solyc05g007430.4' => 'sly', 'Solyc07g063150.3' => 'sly', 'Solyc08g016620.3' => 'sly', 'Solyc09g057590.3' => 'sly', 'Solyc09g057600.1' => 'sly', 'Solyc10g009050.3' => 'sly', 'Solyc11g017420.2' => 'sly', 'Sopen01g053810' => 'spe', 'Sopen02g023040' => 'spe', 'Sopen03g002440' => 'spe', 'Sopen04g033350' => 'spe', 'Sopen05g003310' => 'spe', 'Sopen07g004050' => 'spe', 'Sopen07g031340' => 'spe', 'Sopen08g006990' => 'spe', 'Sopen10g004830' => 'spe', 'Sopen11g009370' => 'spe', 'Sp1g24450' => 'spa', 'Sp1g29670' => 'spa', 'Sp1g39600' => 'spa', 'Sp2g11080' => 'spa', 'Sp2g13970' => 'spa', 'Sp4g16130' => 'spa', 'Sp6g13080' => 'spa', 'Sp7g37270' => 'spa', 'TAR371G0065' => 'tar', 'TAR376G0340' => 'tar', 'TAR376G0435' => 'tar', 'TAR381G0002' => 'tar', 'TAR381G1236' => 'tar', 'TAR624G0055' => 'tar', 'TAR624G0324' => 'tar', 'TAR624G0696' => 'tar', 'TAR624G0906' => 'tar', 'TAR625G0107' => 'tar', 'TAR626G0015' => 'tar', 'TAR626G1356' => 'tar', 'TAR627G0888' => 'tar', 'TAR628G0399' => 'tar', 'TAR628G1327' => 'tar', 'TAR629G2831' => 'tar', 'TAR629G2874' => 'tar', 'TAR633G1432' => 'tar', 'TAR633G2771' => 'tar', 'THA.LOC104803394' => 'tha', 'THA.LOC104805153' => 'tha', 'THA.LOC104806784' => 'tha', 'THA.LOC104810473' => 'tha', 'THA.LOC104813100' => 'tha', 'THA.LOC104814215' => 'tha', 'THA.LOC104815554' => 'tha', 'THA.LOC104820544' => 'tha', 'THA.LOC104824754' => 'tha', 'THA.LOC104827717' => 'tha', 'Thecc.02G031400' => 'tca', 'Thecc.02G055900' => 'tca', 'Thecc.02G350800' => 'tca', 'Thecc.06G150900' => 'tca', 'Thecc.06G186600' => 'tca', 'Thecc.07G089600' => 'tca', 'Thecc.08G020400' => 'tca', 'Thecc.08G182100' => 'tca', 'Thhalv10000873m.g' => 'esa', 'Thhalv10004185m.g' => 'esa', 'Thhalv10006981m.g' => 'esa', 'Thhalv10007204m.g' => 'esa', 'Thhalv10011374m.g' => 'esa', 'Thhalv10013482m.g' => 'esa', 'Thhalv10017801m.g' => 'esa', 'Thhalv10024983m.g' => 'esa', 'TPR.G12072' => 'tpr', 'TPR.G15769' => 'tpr', 'TPR.G16504' => 'tpr', 'TPR.G16506' => 'tpr', 'TPR.G24345' => 'tpr', 'TPR.G26666' => 'tpr', 'TPR.G27320' => 'tpr', 'TPR.G31819' => 'tpr', 'TPR.G38879' => 'tpr', 'TPR.G39015' => 'tpr', 'TPR.G8819' => 'tpr', 'TWI09G0924' => 'twi', 'TWI12G0811' => 'twi', 'TWI12G1294' => 'twi', 'TWI31G0150' => 'twi', 'TWI36G1262' => 'twi', 'TWI38G1287' => 'twi', 'TWI38G1633' => 'twi', 'TWI38G1982' => 'twi', 'TWI39G0116' => 'twi', 'TWI60G1011' => 'twi', 'TWI63G0171' => 'twi', 'TWI73G0839' => 'twi', 'TWI79G1511' => 'twi', 'unitig_0.g915' => 'ugi', 'unitig_0.g916' => 'ugi', 'unitig_21.g20219' => 'ugi', 'unitig_21.g20416' => 'ugi', 'unitig_578.g16132' => 'ugi', 'unitig_578.g16718' => 'ugi', 'unitig_62.g23481' => 'ugi', 'unitig_744.g24535' => 'ugi', 'unitig_749.g13525' => 'ugi', 'vmacro01248' => 'vma', 'vmacro02290' => 'vma', 'vmacro10946' => 'vma', 'vmacro11865' => 'vma', 'vmacro12493' => 'vma', 'vmacro17322' => 'vma', 'vmacro21599' => 'vma', 'vmacro23041' => 'vma', 'VMungo0251G0004' => 'vmu', 'VMungo0251G2639' => 'vmu', 'VMungo0251G2967' => 'vmu', 'VMungo0540G0864' => 'vmu', 'VMungo0540G1569' => 'vmu', 'VMungo0647G0317' => 'vmu', 'VMungo0720G1373' => 'vmu', 'VMungo0720G1508' => 'vmu', 'VMungo1080G0485' => 'vmu', 'VMungo1215G3177' => 'vmu', 'Zm00001eb112600' => 'zma', 'Zm00001eb120220' => 'zma', 'Zm00001eb153240' => 'zma', 'Zm00001eb168880' => 'zma', 'Zm00001eb213920' => 'zma', 'Zm00001eb228280' => 'zma', 'Zm00001eb254580' => 'zma', 'Zm00001eb272180' => 'zma', 'Zm00001eb293190' => 'zma', 'Zm00001eb322930' => 'zma', 'Zm00001eb353360' => 'zma', 'Zm00001eb353390' => 'zma', 'Zm00001eb353430' => 'zma', 'Zm00001eb353440' => 'zma', 'Zm00001eb353780' => 'zma' ) $gf_id = 'HOM05D000499' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000499' ) $data_identifier = 'HOM05D000499' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 29, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 12, 'amhyb' => (int) 8, 'aly' => (int) 12, 'aox' => (int) 9, 'arhy' => (int) 26, 'ath' => (int) 8, 'atr' => (int) 7, 'acertr' => (int) 10, 'cqu' => (int) 15, 'bca' => (int) 29, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 11, 'cansat' => (int) 8, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 9, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 8, 'cpa' => (int) 10, 'csa' => (int) 7, 'camsi' => (int) 20, 'dca' => (int) 8, 'din' => (int) 12, 'dzi' => (int) 14, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 6, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 38, 'gra' => (int) 16, 'vvi' => (int) 8, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 5, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 11, 'lja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 11, 'mpo' => (int) 3, 'mbi' => (int) 14, 'mdo' => (int) 14, 'mtr' => (int) 8, 'cme' => (int) 9, 'egut' => (int) 9, 'ama' => (int) 11, 'nta' => (int) 17, 'nnu' => (int) 11, 'oeu' => (int) 18, 'osa' => (int) 8, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 6, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 9, 'rsi' => (int) 9, 'sbr' => (int) 10, 'sbo' => (int) 8, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 10, 'sas' => (int) 10, 'shi' => (int) 6, 'smo' => (int) 7, 'sly' => (int) 14, 'spe' => (int) 10, 'spa' => (int) 8, 'tar' => (int) 19, 'tha' => (int) 10, 'tca' => (int) 8, 'esa' => (int) 8, 'tpr' => (int) 11, 'twi' => (int) 13, 'ugi' => (int) 9, 'vma' => (int) 8, 'vmu' => (int) 10, 'zma' => (int) 15 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb353780' $species_info = array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ) $local_species = 'ppe' $disabled = '' $selected = '' $num_hits = (int) 0include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000499', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1066', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p29780' => 'bna', 'A02p33180' => 'bna', 'A03p16470' => 'bna', 'A03p66010' => 'bna', 'A04p25970' => 'bna', 'A06p01270' => 'bna', 'A06p46080' => 'bna', 'A07p11400' => 'bna', 'A08p01840' => 'bna', 'A08p08230' => 'bna', 'A08p25740' => 'bna', 'A09p32070' => 'bna', 'A09p37830' => 'bna', 'A09p42840' => 'bna', 'A09p42850' => 'bna', 'Aa31LG10G2060' => 'aar', 'Aa31LG2G7410' => 'aar', 'Aa31LG6G10200' => 'aar', 'Aa31LG6G16680' => 'aar', 'Aa31LG6G8470' => 'aar', 'Aa31LG9G12730' => 'aar', 'Aa31LG9G13680' => 'aar', 'Aa31LG9G14920' => 'aar', 'Aa31LG9G6650' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4977' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5467' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3254' => 'aag', 'Actinidia02578' => 'ach', 'Actinidia07693' => 'ach', 'Actinidia08413' => 'ach', 'Actinidia08414' => 'ach', 'Actinidia15289' => 'ach', 'Actinidia19871' => 'ach', 'Actinidia21475' => 'ach', 'Actinidia22576' => 'ach', 'Actinidia28327' => 'ach', 'Actinidia32491' => 'ach', 'Actinidia39463' => 'ach', 'Actinidia39571' => 'ach', 'Ah.01g013750' => 'amhyb', 'Ah.01g023210' => 'amhyb', 'Ah.04g164850' => 'amhyb', 'Ah.05g178060' => 'amhyb', 'Ah.07g204270' => 'amhyb', 'Ah.07g208480' => 'amhyb', 'Ah.09g237410' => 'amhyb', 'Ah.14g089460' => 'amhyb', 'AL1G41790' => 'aly', 'AL1G49050' => 'aly', 'AL1G53810' => 'aly', 'AL1G61400' => 'aly', 'AL4G18580' => 'aly', 'AL5G12510' => 'aly', 'AL5G12540' => 'aly', 'AL6G43230' => 'aly', 'AL7G10370' => 'aly', 'AL7G19250' => 'aly', 'AL8G12240' => 'aly', 'AL8G18540' => 'aly', 'Aqoxy1G02409' => 'aox', 'Aqoxy2G03993' => 'aox', 'Aqoxy3G03357' => 'aox', 'Aqoxy4G00785' => 'aox', 'Aqoxy5G02598' => 'aox', 'Aqoxy6G00132' => 'aox', 'Aqoxy7G01776' => 'aox', 'Aqoxy7G02316' => 'aox', 'Aqoxy7G03973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.12AFKW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B8730' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27IQR1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3F75VG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3RE0GA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41TCQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.527VTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FIR39' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5W8UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DA38EV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ63HS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H1I32C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HC27T5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4M8AP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7N3CZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9UVDZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LS1NQA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT1D4B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SKC4TM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCFV76' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF9Q1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQWD9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1ZM88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WE07RT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YCK7VH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJE6Q6' => 'arhy', 'AT1G28240' => 'ath', 'AT1G34550' => 'ath', 'AT1G53040' => 'ath', 'AT2G02910' => 'ath', 'AT4G09630' => 'ath', 'AT4G38500' => 'ath', 'AT5G42660' => 'ath', 'AT5G46220' => 'ath', 'ATR0152G026' => 'atr', 'ATR0564G343' => 'atr', 'ATR0706G151' => 'atr', 'ATR0733G207' => 'atr', 'ATR0751G234' => 'atr', 'ATR0807G048' => 'atr', 'ATR1091G084' => 'atr', 'Atru.chr10.1229' => 'acertr', 'Atru.chr10.1230' => 'acertr', 'Atru.chr10.1874' => 'acertr', 'Atru.chr11.1808' => 'acertr', 'Atru.chr13.1795' => 'acertr', 'Atru.chr13.570' => 'acertr', 'Atru.chr2.2608' => 'acertr', 'Atru.chr2.2609' => 'acertr', 'Atru.chr5.3428' => 'acertr', 'Atru.chr8.1171' => 'acertr', 'AUR62004651' => 'cqu', 'AUR62008675' => 'cqu', 'AUR62010014' => 'cqu', 'AUR62013004' => 'cqu', 'AUR62014825' => 'cqu', 'AUR62015015' => 'cqu', 'AUR62015151' => 'cqu', 'AUR62017020' => 'cqu', 'AUR62019422' => 'cqu', 'AUR62023570' => 'cqu', 'AUR62025571' => 'cqu', 'AUR62029098' => 'cqu', 'AUR62033863' => 'cqu', 'AUR62034296' => 'cqu', 'AUR62040075' => 'cqu', 'BcaB02g07334' => 'bca', 'BcaB02g10575' => 'bca', 'BcaB03g12119' => 'bca', 'BcaB03g12120' => 'bca', 'BcaB03g13945' => 'bca', 'BcaB04g17123' => 'bca', 'BcaB04g17867' => 'bca', 'BcaB04g19839' => 'bca', 'BcaB07g30317' => 'bca', 'BcaB07g32432' => 'bca', 'BcaB07g33362' => 'bca', 'BcaB08g36611' => 'bca', 'BcaC01g00028' => 'bca', 'BcaC01g01356' => 'bca', 'BcaC01g02034' => 'bca', 'BcaC01g06051' => 'bca', 'BcaC03g16839' => 'bca', 'BcaC03g17176' => 'bca', 'BcaC05g26829' => 'bca', 'BcaC06g31490' => 'bca', 'BcaC06g35344' => 'bca', 'BcaC06g36570' => 'bca', 'BcaC07g37537' => 'bca', 'BcaC08g43491' => 'bca', 'BcaC08g43773' => 'bca', 'BcaNung00234' => 'bca', 'BcaNung01982' => 'bca', 'BcaNung03707' => 'bca', 'BcaNung06454' => 'bca', 'BolC2t10762H' => 'bol', 'BolC2t11191H' => 'bol', 'BolC3t14322H' => 'bol', 'BolC3t19747H' => 'bol', 'BolC3t21425H' => 'bol', 'BolC4t27800H' => 'bol', 'BolC5t31423H' => 'bol', 'BolC6t35951H' => 'bol', 'BolC6t36282H' => 'bol', 'BolC7t40678H' => 'bol', 'BolC7t40679H' => 'bol', 'BolC7t42222H' => 'bol', 'BolC7t43492H' => 'bol', 'BolC7t46785H' => 'bol', 'BolC8t47853H' => 'bol', 'BolC9t56805H' => 'bol', 'BraA02t08000Z' => 'bra', 'BraA02t08341Z' => 'bra', 'BraA03t10936Z' => 'bra', 'BraA03t15657Z' => 'bra', 'BraA04t18100Z' => 'bra', 'BraA05t20523Z' => 'bra', 'BraA06t23353Z' => 'bra', 'BraA06t27473Z' => 'bra', 'BraA06t27769Z' => 'bra', 'BraA07t28928Z' => 'bra', 'BraA08t32236Z' => 'bra', 'BraA08t32841Z' => 'bra', 'BraA08t34524Z' => 'bra', 'BraA09t38742Z' => 'bra', 'BraA09t39295Z' => 'bra', 'C02p47180' => 'bna', 'C02p50990' => 'bna', 'C03p19360' => 'bna', 'C03p74950' => 'bna', 'C03p91000' => 'bna', 'C04p63260' => 'bna', 'C05p27050' => 'bna', 'C06p08750' => 'bna', 'C06p11490' => 'bna', 'C07p02820' => 'bna', 'C07p17180' => 'bna', 'C07p29440' => 'bna', 'C07p63730' => 'bna', 'C09p39260' => 'bna', 'CAN.G1164.34' => 'can', 'CAN.G1164.39' => 'can', 'CAN.G1530.3' => 'can', 'CAN.G162.61' => 'can', 'CAN.G176.6' => 'can', 'CAN.G289.49' => 'can', 'CAN.G370.21' => 'can', 'CAN.G370.22' => 'can', 'CAN.G371.117' => 'can', 'CAN.G58.37' => 'can', 'CAN.G588.98' => 'can', 'CANSAT21G2266' => 'cansat', 'CANSAT25G2799' => 'cansat', 'CANSAT35G0862' => 'cansat', 'CANSAT35G1704' => 'cansat', 'CANSAT35G1760' => 'cansat', 'CANSAT56G3971' => 'cansat', 'CANSAT56G4116' => 'cansat', 'CANSAT80G1259' => 'cansat', 'CARHR027730' => 'chi', 'CARHR033880' => 'chi', 'CARHR043270' => 'chi', 'CARHR145330' => 'chi', 'CARHR145340' => 'chi', 'CARHR175570' => 'chi', 'CARHR181570' => 'chi', 'CARHR258470' => 'chi', 'CARHR260490' => 'chi', 'CARHR294220' => 'chi', 'Carub.0001s2668' => 'cru', 'Carub.0001s3257' => 'cru', 'Carub.0001s4220' => 'cru', 'Carub.0005s0179' => 'cru', 'Carub.0006s2807' => 'cru', 'Carub.0007s0039' => 'cru', 'Carub.0008s0169' => 'cru', 'Carub.0008s0636' => 'cru', 'Ca_00338_v3' => 'car', 'Ca_00542_v3' => 'car', 'Ca_01844_v3' => 'car', 'Ca_10611_v3' => 'car', 'Ca_13326_v3' => 'car', 'Ca_17944_v3' => 'car', 'Ca_18546_v3' => 'car', 'Ca_24219_v3' => 'car', 'Ca_29972_v3' => 'car', 'CBR_g3681' => 'cbr', 'CBR_g40021' => 'cbr', 'Cc01_g08140' => 'ccan', 'Cc02_g13410' => 'ccan', 'Cc02_g37480' => 'ccan', 'Cc05_g12030' => 'ccan', 'Cc09_g03370' => 'ccan', 'Cc09_g10300' => 'ccan', 'Cc10_g03530' => 'ccan', 'Cc10_g11380' => 'ccan', 'CDE01G0176' => 'cde', 'CDE02G0675' => 'cde', 'CDE02G0942' => 'cde', 'CDE02G1153' => 'cde', 'CDE02G4177' => 'cde', 'CDE04G2117' => 'cde', 'CDE04G2736' => 'cde', 'CDE08G1161' => 'cde', 'CDE09G1238' => 'cde', 'Cfa000467' => 'cfa', 'Cfa000947' => 'cfa', 'Cfa004969' => 'cfa', 'Cfa005284' => 'cfa', 'Cfa008993' => 'cfa', 'Cfa018187' => 'cfa', 'Cfa018454' => 'cfa', 'Cfa020585' => 'cfa', 'Ciclev10000424m.g' => 'ccl', 'Ciclev10003605m.g' => 'ccl', 'Ciclev10007828m.g' => 'ccl', 'Ciclev10014620m.g' => 'ccl', 'Ciclev10015169m.g' => 'ccl', 'Ciclev10018291m.g' => 'ccl', 'Ciclev10028256m.g' => 'ccl', 'Ciclev10033822m.g' => 'ccl', 'CiPaw.05G060300' => 'cil', 'CiPaw.05G085000' => 'cil', 'CiPaw.06G083700' => 'cil', 'CiPaw.06G120300' => 'cil', 'CiPaw.09G060500' => 'cil', 'CiPaw.09G123800' => 'cil', 'CiPaw.11G169700' => 'cil', 'CiPaw.12G118300' => 'cil', 'CiPaw.15G071000' => 'cil', 'CiPaw.15G081900' => 'cil', 'ClCG01G024610' => 'cla', 'ClCG03G006070' => 'cla', 'ClCG05G019250' => 'cla', 'ClCG09G009500' => 'cla', 'ClCG11G008200' => 'cla', 'ClCG11G018080' => 'cla', 'COL.COLO4_17373' => 'col', 'COL.COLO4_22994' => 'col', 'COL.COLO4_26389' => 'col', 'COL.COLO4_27170' => 'col', 'COL.COLO4_31074' => 'col', 'COL.COLO4_31465' => 'col', 'COL.COLO4_36438' => 'col', 'COL.COLO4_36439' => 'col', 'Cpa.g.c38781' => 'cpa', 'Cpa.g.sc128.12' => 'cpa', 'Cpa.g.sc166.7' => 'cpa', 'Cpa.g.sc166.8' => 'cpa', 'Cpa.g.sc20.111' => 'cpa', 'Cpa.g.sc27.31' => 'cpa', 'Cpa.g.sc64.36' => 'cpa', 'Cpa.g.sc64.37' => 'cpa', 'Cpa.g.sc66.49' => 'cpa', 'Cpa.g.sc80.64' => 'cpa', 'CsaV3_1G012320' => 'csa', 'CsaV3_2G008480' => 'csa', 'CsaV3_2G033450' => 'csa', 'CsaV3_3G044830' => 'csa', 'CsaV3_4G033710' => 'csa', 'CsaV3_6G051730' => 'csa', 'CsaV3_7G025350' => 'csa', 'CSS0001067' => 'camsi', 'CSS0005996' => 'camsi', 'CSS0006590' => 'camsi', 'CSS0009673' => 'camsi', 'CSS0010201' => 'camsi', 'CSS0010549' => 'camsi', 'CSS0011364' => 'camsi', 'CSS0014473' => 'camsi', 'CSS0014961' => 'camsi', 'CSS0020191' => 'camsi', 'CSS0021165' => 'camsi', 'CSS0022306' => 'camsi', 'CSS0030591' => 'camsi', 'CSS0030696' => 'camsi', 'CSS0032653' => 'camsi', 'CSS0037487' => 'camsi', 'CSS0041102' => 'camsi', 'CSS0041261' => 'camsi', 'CSS0046246' => 'camsi', 'CSS0049256' => 'camsi', 'DCAR_004075' => 'dca', 'DCAR_011538' => 'dca', 'DCAR_019553' => 'dca', 'DCAR_020952' => 'dca', 'DCAR_021739' => 'dca', 'DCAR_027407' => 'dca', 'DCAR_027913' => 'dca', 'DCAR_028066' => 'dca', 'Dinv05899' => 'din', 'Dinv07563' => 'din', 'Dinv08010' => 'din', 'Dinv14125' => 'din', 'Dinv20172' => 'din', 'Dinv30743' => 'din', 'Dinv31229' => 'din', 'Dinv34162' => 'din', 'Dinv36028' => 'din', 'Dinv39368' => 'din', 'Dinv40565' => 'din', 'Dinv41706' => 'din', 'Duzib052G0089' => 'dzi', 'Duzib116G0641' => 'dzi', 'Duzib132G0069' => 'dzi', 'Duzib132G1219' => 'dzi', 'Duzib147G0278' => 'dzi', 'Duzib160G0480' => 'dzi', 'Duzib170G0661' => 'dzi', 'Duzib177G0591' => 'dzi', 'Duzib187G1353' => 'dzi', 'Duzib192G0858' => 'dzi', 'Duzib192G0883' => 'dzi', 'Duzib213G0506' => 'dzi', 'Duzib235G0289' => 'dzi', 'Duzib251G0422' => 'dzi', 'ECA232G3898' => 'eca', 'ECA233G5950' => 'eca', 'ECA234G1699' => 'eca', 'ECA234G2421' => 'eca', 'ECA236G0426' => 'eca', 'ECA236G4331' => 'eca', 'ECA248G2573' => 'eca', 'EL10Ac1g00077' => 'bvu', 'EL10Ac1g01746' => 'bvu', 'EL10Ac2g03464' => 'bvu', 'EL10Ac4g08176' => 'bvu', 'EL10Ac7g17521' => 'bvu', 'EL10Ac8g20386' => 'bvu', 'EL10Ac9g21343' => 'bvu', 'EL10Ac9g22688' => 'bvu', 'Eucgr.B03434' => 'egr', 'Eucgr.D00618' => 'egr', 'Eucgr.E02395' => 'egr', 'Eucgr.F01129' => 'egr', 'Eucgr.F02622' => 'egr', 'Eucgr.F04207' => 'egr', 'FAN01G0570' => 'fan', 'FAN03G3351' => 'fan', 'FAN06G3702' => 'fan', 'FAN07G2149' => 'fan', 'FAN10G3758' => 'fan', 'FAN11G1170' => 'fan', 'FAN11G2050' => 'fan', 'FAN11G2724' => 'fan', 'FAN12G1700' => 'fan', 'FAN12G2028' => 'fan', 'FAN15G1160' => 'fan', 'FAN15G3063' => 'fan', 'FAN16G2540' => 'fan', 'FAN16G3077' => 'fan', 'FAN16G3624' => 'fan', 'FAN17G0221' => 'fan', 'FAN20G2492' => 'fan', 'FAN20G2905' => 'fan', 'FAN21G0548' => 'fan', 'FAN21G1300' => 'fan', 'FAN22G0077' => 'fan', 'FAN22G1315' => 'fan', 'FAN24G1280' => 'fan', 'FAN24G1445' => 'fan', 'FAN24G3527' => 'fan', 'FAN25G0464' => 'fan', 'FAN25G2885' => 'fan', 'FAN25G3270' => 'fan', 'FAN27G1101' => 'fan', 'FAN27G2846' => 'fan', 'FAN27G3524' => 'fan', 'FvH4_2g11770' => 'fve', 'FvH4_2g15630' => 'fve', 'FvH4_3g05570' => 'fve', 'FvH4_3g09110' => 'fve', 'FvH4_3g19940' => 'fve', 'FvH4_4g04821' => 'fve', 'FvH4_4g31480' => 'fve', 'FvH4_7g01740' => 'fve', 'Glyma.05G130400' => 'gma', 'Glyma.05G156400' => 'gma', 'Glyma.07G197000' => 'gma', 'Glyma.08G085151' => 'gma', 'Glyma.08G114500' => 'gma', 'Glyma.08G300400' => 'gma', 'Glyma.10G215800' => 'gma', 'Glyma.12G224400' => 'gma', 'Glyma.13G179300' => 'gma', 'Glyma.13G218151' => 'gma', 'Glyma.13G238800' => 'gma', 'Glyma.13G276900' => 'gma', 'Glyma.14G078200' => 'gma', 'Glyma.15G074500' => 'gma', 'Glyma.15G094100' => 'gma', 'Glyma.17G247200' => 'gma', 'Glyma.18G120100' => 'gma', 'Glyma.20G176000' => 'gma', 'Gohir.A01G063600' => 'ghi', 'Gohir.A01G170301' => 'ghi', 'Gohir.A02G060500' => 'ghi', 'Gohir.A05G133850' => 'ghi', 'Gohir.A05G161400' => 'ghi', 'Gohir.A06G012900' => 'ghi', 'Gohir.A06G035901' => 'ghi', 'Gohir.A06G127100' => 'ghi', 'Gohir.A06G210500' => 'ghi', 'Gohir.A08G008650' => 'ghi', 'Gohir.A09G072700' => 'ghi', 'Gohir.A09G088301' => 'ghi', 'Gohir.A10G040600' => 'ghi', 'Gohir.A12G036300' => 'ghi', 'Gohir.A12G143350' => 'ghi', 'Gohir.A12G165500' => 'ghi', 'Gohir.A13G145700' => 'ghi', 'Gohir.D01G050000' => 'ghi', 'Gohir.D01G051366' => 'ghi', 'Gohir.D01G161350' => 'ghi', 'Gohir.D02G065900' => 'ghi', 'Gohir.D05G164200' => 'ghi', 'Gohir.D05G355500' => 'ghi', 'Gohir.D06G010400' => 'ghi', 'Gohir.D06G111250' => 'ghi', 'Gohir.D06G132000' => 'ghi', 'Gohir.D06G210500' => 'ghi', 'Gohir.D07G165675' => 'ghi', 'Gohir.D08G062240' => 'ghi', 'Gohir.D08G086101' => 'ghi', 'Gohir.D08G138060' => 'ghi', 'Gohir.D09G072300' => 'ghi', 'Gohir.D10G041400' => 'ghi', 'Gohir.D11G191020' => 'ghi', 'Gohir.D11G212066' => 'ghi', 'Gohir.D12G036300' => 'ghi', 'Gohir.D12G168600' => 'ghi', 'Gohir.D13G150600' => 'ghi', 'Gorai.001G057300' => 'gra', 'Gorai.002G069900' => 'gra', 'Gorai.002G200000' => 'gra', 'Gorai.003G067600' => 'gra', 'Gorai.005G074800' => 'gra', 'Gorai.006G087300' => 'gra', 'Gorai.008G037500' => 'gra', 'Gorai.008G181400' => 'gra', 'Gorai.009G169400' => 'gra', 'Gorai.009G387900' => 'gra', 'Gorai.010G013300' => 'gra', 'Gorai.010G153800' => 'gra', 'Gorai.010G255800' => 'gra', 'Gorai.011G043700' => 'gra', 'Gorai.011G198900' => 'gra', 'Gorai.013G168400' => 'gra', 'GSVIVG01005212001' => 'vvi', 'GSVIVG01006163001' => 'vvi', 'GSVIVG01009625001' => 'vvi', 'GSVIVG01014338001' => 'vvi', 'GSVIVG01020005001' => 'vvi', 'GSVIVG01021450001' => 'vvi', 'GSVIVG01023975001' => 'vvi', 'GSVIVG01034490001' => 'vvi', 'HanXRQChr04g0112071' => 'han', 'HanXRQChr05g0131151' => 'han', 'HanXRQChr09g0262371' => 'han', 'HanXRQChr09g0268401' => 'han', 'HanXRQChr10g0279241' => 'han', 'HanXRQChr10g0297961' => 'han', 'HanXRQChr11g0326231' => 'han', 'HanXRQChr11g0328471' => 'han', 'HanXRQChr16g0507941' => 'han', 'HanXRQChr17g0560211' => 'han', 'Haze_02108' => 'cav', 'Haze_02428' => 'cav', 'Haze_05593' => 'cav', 'Haze_06448' => 'cav', 'Haze_09427' => 'cav', 'Haze_12022' => 'cav', 'Haze_17612' => 'cav', 'Haze_17928' => 'cav', 'Hma1.2p1_0032F.1_g019250' => 'hma', 'Hma1.2p1_0163F.1_g072690' => 'hma', 'Hma1.2p1_0265F.1_g106710' => 'hma', 'Hma1.2p1_0286F.1_g113970' => 'hma', 'Hma1.2p1_0363F.1_g136640' => 'hma', 'Hma1.2p1_0584F.1_g183470' => 'hma', 'Hma1.2p1_0885F.1_g232570' => 'hma', 'HPP92_006022' => 'vpl', 'HPP92_007320' => 'vpl', 'HPP92_011521' => 'vpl', 'HPP92_019387' => 'vpl', 'HPP92_024038' => 'vpl', 'Hund05891' => 'sun', 'Hund06450' => 'sun', 'Hund12053' => 'sun', 'Hund16800' => 'sun', 'Hund21222' => 'sun', 'Hund22896' => 'sun', 'Hund23746' => 'sun', 'Hund27083' => 'sun', 'Lalb_Chr02g0141831' => 'lal', 'Lalb_Chr02g0141841' => 'lal', 'Lalb_Chr05g0220411' => 'lal', 'Lalb_Chr06g0162081' => 'lal', 'Lalb_Chr09g0327651' => 'lal', 'Lalb_Chr13g0295051' => 'lal', 'Lalb_Chr15g0086801' => 'lal', 'Lalb_Chr16g0383781' => 'lal', 'Lalb_Chr16g0383791' => 'lal', 'Lalb_Chr18g0055441' => 'lal', 'Lalb_Chr18g0059611' => 'lal', 'Lalb_Chr20g0109661' => 'lal', 'Lalb_Chr20g0109831' => 'lal', 'Lalb_Chr20g0121871' => 'lal', 'Lalb_Chr22g0355361' => 'lal', 'Lalb_Chr25g0286371' => 'lal', 'Lj1A1187G43' => 'lonja', 'Lj1A1205T50' => 'lonja', 'Lj1A800G33' => 'lonja', 'Lj1C1187T7' => 'lonja', 'Lj1C843T11' => 'lonja', 'Lj1g0010940' => 'lja', 'Lj2A288T69' => 'lonja', 'Lj3g0024276' => 'lja', 'Lj4A47T76' => 'lonja', 'Lj4g0005805' => 'lja', 'Lj4g0006097' => 'lja', 'Lj4g0008528' => 'lja', 'Lj4g0024907' => 'lja', 'Lj5g0012472' => 'lja', 'Lj5g0018648' => 'lja', 'Lj6C789G1' => 'lonja', 'Lj6g0004000' => 'lja', 'Lj7A292G67' => 'lonja', 'Lj7A292T64' => 'lonja', 'Lj9A400T58' => 'lonja', 'Lsat_1_v5_gn_1_126181' => 'lsa', 'Lsat_1_v5_gn_4_123041' => 'lsa', 'Lsat_1_v5_gn_4_133620' => 'lsa', 'Lsat_1_v5_gn_4_53221' => 'lsa', 'Lsat_1_v5_gn_4_71961' => 'lsa', 'Lsat_1_v5_gn_7_105241' => 'lsa', 'Lsat_1_v5_gn_7_21361' => 'lsa', 'Lsat_1_v5_gn_7_28860' => 'lsa', 'Lsat_1_v5_gn_7_31260' => 'lsa', 'Lsat_1_v5_gn_8_52801' => 'lsa', 'Manes.02G191400' => 'mes', 'Manes.03G110100' => 'mes', 'Manes.04G071100' => 'mes', 'Manes.05G100500' => 'mes', 'Manes.05G164700' => 'mes', 'Manes.15G087000' => 'mes', 'Manes.15G121500' => 'mes', 'Manes.16G028300' => 'mes', 'Manes.17G046100' => 'mes', 'Manes.17G069800' => 'mes', 'Manes.18G100500' => 'mes', 'Mapoly0002s0109' => 'mpo', 'Mapoly0024s0007' => 'mpo', 'Mapoly0089s0032' => 'mpo', 'MBI04_g42241_MAGBIO' => 'mbi', 'MBI05_g11988_MAGBIO' => 'mbi', 'MBI05_g35452_MAGBIO' => 'mbi', 'MBI07_g30179_MAGBIO' => 'mbi', 'MBI07_g35859_MAGBIO' => 'mbi', 'MBI07_g35860_MAGBIO' => 'mbi', 'MBI07_g37166_MAGBIO' => 'mbi', 'MBI08_g18172_MAGBIO' => 'mbi', 'MBI09_g08441_MAGBIO' => 'mbi', 'MBI13_g01676_MAGBIO' => 'mbi', 'MBI14_g42955_MAGBIO' => 'mbi', 'MBI16_g13161_MAGBIO' => 'mbi', 'MBI17_g27204_MAGBIO' => 'mbi', 'MBI19_g21595_MAGBIO' => 'mbi', 'MD00G1148400' => 'mdo', 'MD02G1301200' => 'mdo', 'MD03G1227800' => 'mdo', 'MD05G1041100' => 'mdo', 'MD05G1124800' => 'mdo', 'MD05G1284000' => 'mdo', 'MD05G1338800' => 'mdo', 'MD05G1338900' => 'mdo', 'MD07G1022800' => 'mdo', 'MD10G1047500' => 'mdo', 'MD10G1127500' => 'mdo', 'MD10G1262300' => 'mdo', 'MD10G1293800' => 'mdo', 'MD16G1074300' => 'mdo', 'Medtr1g021670' => 'mtr', 'Medtr1g096320' => 'mtr', 'Medtr2g013690' => 'mtr', 'Medtr2g019450' => 'mtr', 'Medtr2g085170' => 'mtr', 'Medtr4g088785' => 'mtr', 'Medtr8g055930' => 'mtr', 'Medtr8g085850' => 'mtr', 'MELO3C002605.2' => 'cme', 'MELO3C003891.2' => 'cme', 'MELO3C004012.2' => 'cme', 'MELO3C007134.2' => 'cme', 'MELO3C008118.2' => 'cme', 'MELO3C016700.2' => 'cme', 'MELO3C024127.2' => 'cme', 'MELO3C033361.2' => 'cme', 'MELO3C033362.2' => 'cme', 'Migut.C00430' => 'egut', 'Migut.C01246' => 'egut', 'Migut.E00101' => 'egut', 'Migut.H01486' => 'egut', 'Migut.H01939' => 'egut', 'Migut.K00360' => 'egut', 'Migut.M00910' => 'egut', 'Migut.M01139' => 'egut', 'Migut.N02677' => 'egut', 'MSTRG.13252' => 'ama', 'MSTRG.14701' => 'ama', 'MSTRG.1521' => 'ama', 'MSTRG.15884' => 'ama', 'MSTRG.16242' => 'ama', 'MSTRG.22285' => 'ama', 'MSTRG.22444' => 'ama', 'MSTRG.2349' => 'ama', 'MSTRG.26308' => 'ama', 'MSTRG.28296' => 'ama', 'MSTRG.9895' => 'ama', 'Nitab4.5_0000110g0060' => 'nta', 'Nitab4.5_0000420g0130' => 'nta', 'Nitab4.5_0000422g0030' => 'nta', 'Nitab4.5_0000560g0180' => 'nta', 'Nitab4.5_0000703g0100' => 'nta', 'Nitab4.5_0000786g0200' => 'nta', 'Nitab4.5_0001336g0020' => 'nta', 'Nitab4.5_0001796g0030' => 'nta', 'Nitab4.5_0003348g0060' => 'nta', 'Nitab4.5_0003698g0040' => 'nta', 'Nitab4.5_0003942g0090' => 'nta', 'Nitab4.5_0004775g0070' => 'nta', 'Nitab4.5_0004864g0030' => 'nta', 'Nitab4.5_0005615g0020' => 'nta', 'Nitab4.5_0009288g0030' => 'nta', 'Nitab4.5_0009341g0010' => 'nta', 'Nitab4.5_0009535g0010' => 'nta', 'Nn1g03995' => 'nnu', 'Nn1g04100' => 'nnu', 'Nn1g06530' => 'nnu', 'Nn3g16404' => 'nnu', 'Nn3g17212' => 'nnu', 'Nn3g20776' => 'nnu', 'Nn3g21923' => 'nnu', 'Nn5g27737' => 'nnu', 'Nn5g29461' => 'nnu', 'Nn7g38355' => 'nnu', 'Nn8g39873' => 'nnu', 'Oeu000548.2' => 'oeu', 'Oeu004672.1' => 'oeu', 'Oeu015605.2' => 'oeu', 'Oeu016092.1' => 'oeu', 'Oeu017879.3' => 'oeu', 'Oeu024910.1' => 'oeu', 'Oeu028965.1' => 'oeu', 'Oeu031269.1' => 'oeu', 'Oeu031270.1' => 'oeu', 'Oeu032535.1' => 'oeu', 'Oeu034151.1' => 'oeu', 'Oeu034152.1' => 'oeu', 'Oeu034588.2' => 'oeu', 'Oeu050846.1' => 'oeu', 'Oeu050849.2' => 'oeu', 'Oeu051063.2' => 'oeu', 'Oeu052368.1' => 'oeu', 'Oeu052370.1' => 'oeu', 'Os01g0210400' => 'osa', 'Os01g0304300' => 'osa', 'Os01g0749100' => 'osa', 'Os02g0745800' => 'osa', 'Os03g0769050' => 'osa', 'Os05g0531500' => 'osa', 'Os06g0724300' => 'osa', 'Os11g0198100' => 'osa', 'Peaxi162Scf00069g01425' => 'pax', 'Peaxi162Scf00280g00811' => 'pax', 'Peaxi162Scf00310g00615' => 'pax', 'Peaxi162Scf00362g00542' => 'pax', 'Peaxi162Scf00461g00310' => 'pax', 'Peaxi162Scf00530g00118' => 'pax', 'Peaxi162Scf00541g00057' => 'pax', 'Peaxi162Scf00661g00017' => 'pax', 'Peaxi162Scf00926g00027' => 'pax', 'Peaxi162Scf01064g00263' => 'pax', 'Peaxi162Scf01211g00135' => 'pax', 'PGR004G2336' => 'pgr', 'PGR042G0327' => 'pgr', 'PGR042G1957' => 'pgr', 'PGR042G2003' => 'pgr', 'PGR042G3929' => 'pgr', 'PGR083G1137' => 'pgr', 'PGR083G1364' => 'pgr', 'PGSC0003DMG400003381' => 'stu', 'PGSC0003DMG400003417' => 'stu', 'PGSC0003DMG400008981' => 'stu', 'PGSC0003DMG400012417' => 'stu', 'PGSC0003DMG400012823' => 'stu', 'PGSC0003DMG400016885' => 'stu', 'PGSC0003DMG400022812' => 'stu', 'PGSC0003DMG400029726' => 'stu', 'PGSC0003DMG401009243' => 'stu', 'PGSC0003DMG401031505' => 'stu', 'PGSC0003DMG402031505' => 'stu', 'Phvul.001G017600' => 'pvu', 'Phvul.002G193500' => 'pvu', 'Phvul.002G228900' => 'pvu', 'Phvul.002G236800' => 'pvu', 'Phvul.003G049500' => 'pvu', 'Phvul.005G072000' => 'pvu', 'Phvul.006G164800' => 'pvu', 'Phvul.006G185100' => 'pvu', 'Phvul.007G090000' => 'pvu', 'Potri.001G399800' => 'ptr', 'Potri.002G149900' => 'ptr', 'Potri.004G044100' => 'ptr', 'Potri.004G177600' => 'ptr', 'Potri.009G138000' => 'ptr', 'Potri.010G094000' => 'ptr', 'Potri.011G053000' => 'ptr', 'Potri.011G119300' => 'ptr', 'Potri.013G113700' => 'ptr', 'Potri.018G107800' => 'ptr', 'Potri.019G084100' => 'ptr', 'Pp3c14_23720' => 'ppa', 'Pp3c16_6340' => 'ppa', 'Pp3c23_13420' => 'ppa', 'Pp3c24_2740' => 'ppa', 'Pp3c25_860' => 'ppa', 'Pp3c8_21750' => 'ppa', 'Prupe.1G273000' => 'ppe', 'Prupe.1G273700' => 'ppe', 'Prupe.1G274100' => 'ppe', 'Prupe.2G023300' => 'ppe', 'Prupe.4G048000' => 'ppe', 'Prupe.4G080400' => 'ppe', 'Prupe.4G181200' => 'ppe', 'Prupe.8G056900' => 'ppe', 'Prupe.8G168700' => 'ppe', 'Psat1g189080' => 'psa', 'Psat1g204760' => 'psa', 'Psat4g175560' => 'psa', 'Psat4g177720' => 'psa', 'Psat5g244240' => 'psa', 'Psat6g010720' => 'psa', 'Psat6g187200' => 'psa', 'Psat7g072040' => 'psa', 'PSO017G3501' => 'pso', 'PSO063G2148' => 'pso', 'PSO063G5608' => 'pso', 'PSO210G6392' => 'pso', 'PSO541G2319' => 'pso', 'PSO541G2836' => 'pso', 'PSO541G4012' => 'pso', 'PSO541G6253' => 'pso', 'PSO675G0580' => 'pso', 'PSO675G0856' => 'pso', 'PSO675G5635' => 'pso', 'PSO675G9157' => 'pso', 'PSO832G1660' => 'pso', 'PSO832G1969' => 'pso', 'QL02p007186' => 'qlo', 'QL02p033904' => 'qlo', 'QL03p064391' => 'qlo', 'QL05p040593' => 'qlo', 'QL05p058242' => 'qlo', 'QL08p021825' => 'qlo', 'QL11p004981' => 'qlo', 'RcHm_v2.0_Chr1g0318301' => 'rch', 'RcHm_v2.0_Chr4g0418501' => 'rch', 'RcHm_v2.0_Chr4g0439971' => 'rch', 'RcHm_v2.0_Chr5g0008541' => 'rch', 'RcHm_v2.0_Chr5g0014101' => 'rch', 'RcHm_v2.0_Chr5g0014131' => 'rch', 'RcHm_v2.0_Chr5g0033621' => 'rch', 'RcHm_v2.0_Chr6g0272041' => 'rch', 'RcHm_v2.0_Chr6g0278831' => 'rch', 'Rhsim02G0130400' => 'rsi', 'Rhsim02G0171100' => 'rsi', 'Rhsim05G0053000' => 'rsi', 'Rhsim05G0053100' => 'rsi', 'Rhsim06G0096500' => 'rsi', 'Rhsim06G0096600' => 'rsi', 'Rhsim06G0199100' => 'rsi', 'Rhsim12G0062300' => 'rsi', 'Rhsim12G0062800' => 'rsi', 'Sabra02G0118600' => 'sbr', 'Sabra04G0027300' => 'sbr', 'Sabra04G0119500' => 'sbr', 'Sabra08G0112500' => 'sbr', 'Sabra11G0036800' => 'sbr', 'Sabra11G0103800' => 'sbr', 'Sabra13G0096300' => 'sbr', 'Sabra16G0262300' => 'sbr', 'Sabra18G0091700' => 'sbr', 'Sabra19G0095400' => 'sbr', 'SalBow6G3080' => 'sbo', 'SalBow7G1157' => 'sbo', 'SalBow7G2123' => 'sbo', 'SalBow7G2285' => 'sbo', 'SalBow7G3537' => 'sbo', 'SalBow8G2947' => 'sbo', 'SalBow8G4463' => 'sbo', 'SalBow8G5466' => 'sbo', 'Sc01g0001750' => 'sci', 'Sc02g0006640' => 'sci', 'Sc02g0006670' => 'sci', 'Sc04g0008220' => 'sci', 'Sc05g0006190' => 'sci', 'Sc08g0002760' => 'sci', 'Sc17g0006170' => 'sci', 'Sc22g0002050' => 'sci', 'Sc23g0001190' => 'sci', 'Sc24g0000980' => 'sci', 'Sed0006245' => 'sed', 'Sed0007543' => 'sed', 'Sed0009411' => 'sed', 'Sed0010765' => 'sed', 'Sed0012944' => 'sed', 'Sed0014682' => 'sed', 'Sed0016174' => 'sed', 'Sed0016796' => 'sed', 'Sed0020317' => 'sed', 'Sed0021467' => 'sed', 'SEGI_01316' => 'sgi', 'SEGI_03374' => 'sgi', 'SEGI_16265' => 'sgi', 'SEGI_18569' => 'sgi', 'SEGI_20351' => 'sgi', 'SEGI_26395' => 'sgi', 'SEGI_29469' => 'sgi', 'SEGI_34771' => 'sgi', 'SEGI_36769' => 'sgi', 'SEGI_37139' => 'sgi', 'SGA_v2.0_scaffold100G29687' => 'sas', 'SGA_v2.0_scaffold118G32472' => 'sas', 'SGA_v2.0_scaffold14G07051' => 'sas', 'SGA_v2.0_scaffold183G39845' => 'sas', 'SGA_v2.0_scaffold1G00174' => 'sas', 'SGA_v2.0_scaffold22G09714' => 'sas', 'SGA_v2.0_scaffold333G48992' => 'sas', 'SGA_v2.0_scaffold46G17491' => 'sas', 'SGA_v2.0_scaffold49G18294' => 'sas', 'SGA_v2.0_scaffold63G21658' => 'sas', 'SHI01741' => 'shi', 'SHI05771' => 'shi', 'SHI18077' => 'shi', 'SHI20525' => 'shi', 'SHI20527' => 'shi', 'SHI20528' => 'shi', 'SMO172G0185' => 'smo', 'SMO198G0020' => 'smo', 'SMO351G0006' => 'smo', 'SMO356G0118' => 'smo', 'SMO358G0296' => 'smo', 'SMO367G0079' => 'smo', 'SMO367G1277' => 'smo', 'Solyc01g014220.3' => 'sly', 'Solyc01g111770.2' => 'sly', 'Solyc02g078180.3' => 'sly', 'Solyc03g006430.3' => 'sly', 'Solyc03g006456.1' => 'sly', 'Solyc03g079860.2' => 'sly', 'Solyc04g079770.3' => 'sly', 'Solyc05g007430.4' => 'sly', 'Solyc07g063150.3' => 'sly', 'Solyc08g016620.3' => 'sly', 'Solyc09g057590.3' => 'sly', 'Solyc09g057600.1' => 'sly', 'Solyc10g009050.3' => 'sly', 'Solyc11g017420.2' => 'sly', 'Sopen01g053810' => 'spe', 'Sopen02g023040' => 'spe', 'Sopen03g002440' => 'spe', 'Sopen04g033350' => 'spe', 'Sopen05g003310' => 'spe', 'Sopen07g004050' => 'spe', 'Sopen07g031340' => 'spe', 'Sopen08g006990' => 'spe', 'Sopen10g004830' => 'spe', 'Sopen11g009370' => 'spe', 'Sp1g24450' => 'spa', 'Sp1g29670' => 'spa', 'Sp1g39600' => 'spa', 'Sp2g11080' => 'spa', 'Sp2g13970' => 'spa', 'Sp4g16130' => 'spa', 'Sp6g13080' => 'spa', 'Sp7g37270' => 'spa', 'TAR371G0065' => 'tar', 'TAR376G0340' => 'tar', 'TAR376G0435' => 'tar', 'TAR381G0002' => 'tar', 'TAR381G1236' => 'tar', 'TAR624G0055' => 'tar', 'TAR624G0324' => 'tar', 'TAR624G0696' => 'tar', 'TAR624G0906' => 'tar', 'TAR625G0107' => 'tar', 'TAR626G0015' => 'tar', 'TAR626G1356' => 'tar', 'TAR627G0888' => 'tar', 'TAR628G0399' => 'tar', 'TAR628G1327' => 'tar', 'TAR629G2831' => 'tar', 'TAR629G2874' => 'tar', 'TAR633G1432' => 'tar', 'TAR633G2771' => 'tar', 'THA.LOC104803394' => 'tha', 'THA.LOC104805153' => 'tha', 'THA.LOC104806784' => 'tha', 'THA.LOC104810473' => 'tha', 'THA.LOC104813100' => 'tha', 'THA.LOC104814215' => 'tha', 'THA.LOC104815554' => 'tha', 'THA.LOC104820544' => 'tha', 'THA.LOC104824754' => 'tha', 'THA.LOC104827717' => 'tha', 'Thecc.02G031400' => 'tca', 'Thecc.02G055900' => 'tca', 'Thecc.02G350800' => 'tca', 'Thecc.06G150900' => 'tca', 'Thecc.06G186600' => 'tca', 'Thecc.07G089600' => 'tca', 'Thecc.08G020400' => 'tca', 'Thecc.08G182100' => 'tca', 'Thhalv10000873m.g' => 'esa', 'Thhalv10004185m.g' => 'esa', 'Thhalv10006981m.g' => 'esa', 'Thhalv10007204m.g' => 'esa', 'Thhalv10011374m.g' => 'esa', 'Thhalv10013482m.g' => 'esa', 'Thhalv10017801m.g' => 'esa', 'Thhalv10024983m.g' => 'esa', 'TPR.G12072' => 'tpr', 'TPR.G15769' => 'tpr', 'TPR.G16504' => 'tpr', 'TPR.G16506' => 'tpr', 'TPR.G24345' => 'tpr', 'TPR.G26666' => 'tpr', 'TPR.G27320' => 'tpr', 'TPR.G31819' => 'tpr', 'TPR.G38879' => 'tpr', 'TPR.G39015' => 'tpr', 'TPR.G8819' => 'tpr', 'TWI09G0924' => 'twi', 'TWI12G0811' => 'twi', 'TWI12G1294' => 'twi', 'TWI31G0150' => 'twi', 'TWI36G1262' => 'twi', 'TWI38G1287' => 'twi', 'TWI38G1633' => 'twi', 'TWI38G1982' => 'twi', 'TWI39G0116' => 'twi', 'TWI60G1011' => 'twi', 'TWI63G0171' => 'twi', 'TWI73G0839' => 'twi', 'TWI79G1511' => 'twi', 'unitig_0.g915' => 'ugi', 'unitig_0.g916' => 'ugi', 'unitig_21.g20219' => 'ugi', 'unitig_21.g20416' => 'ugi', 'unitig_578.g16132' => 'ugi', 'unitig_578.g16718' => 'ugi', 'unitig_62.g23481' => 'ugi', 'unitig_744.g24535' => 'ugi', 'unitig_749.g13525' => 'ugi', 'vmacro01248' => 'vma', 'vmacro02290' => 'vma', 'vmacro10946' => 'vma', 'vmacro11865' => 'vma', 'vmacro12493' => 'vma', 'vmacro17322' => 'vma', 'vmacro21599' => 'vma', 'vmacro23041' => 'vma', 'VMungo0251G0004' => 'vmu', 'VMungo0251G2639' => 'vmu', 'VMungo0251G2967' => 'vmu', 'VMungo0540G0864' => 'vmu', 'VMungo0540G1569' => 'vmu', 'VMungo0647G0317' => 'vmu', 'VMungo0720G1373' => 'vmu', 'VMungo0720G1508' => 'vmu', 'VMungo1080G0485' => 'vmu', 'VMungo1215G3177' => 'vmu', 'Zm00001eb112600' => 'zma', 'Zm00001eb120220' => 'zma', 'Zm00001eb153240' => 'zma', 'Zm00001eb168880' => 'zma', 'Zm00001eb213920' => 'zma', 'Zm00001eb228280' => 'zma', 'Zm00001eb254580' => 'zma', 'Zm00001eb272180' => 'zma', 'Zm00001eb293190' => 'zma', 'Zm00001eb322930' => 'zma', 'Zm00001eb353360' => 'zma', 'Zm00001eb353390' => 'zma', 'Zm00001eb353430' => 'zma', 'Zm00001eb353440' => 'zma', 'Zm00001eb353780' => 'zma' ), 'gf_id' => 'HOM05D000499', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000499' ), 'data_identifier' => 'HOM05D000499', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000499', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1066', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p29780' => 'bna', 'A02p33180' => 'bna', 'A03p16470' => 'bna', 'A03p66010' => 'bna', 'A04p25970' => 'bna', 'A06p01270' => 'bna', 'A06p46080' => 'bna', 'A07p11400' => 'bna', 'A08p01840' => 'bna', 'A08p08230' => 'bna', 'A08p25740' => 'bna', 'A09p32070' => 'bna', 'A09p37830' => 'bna', 'A09p42840' => 'bna', 'A09p42850' => 'bna', 'Aa31LG10G2060' => 'aar', 'Aa31LG2G7410' => 'aar', 'Aa31LG6G10200' => 'aar', 'Aa31LG6G16680' => 'aar', 'Aa31LG6G8470' => 'aar', 'Aa31LG9G12730' => 'aar', 'Aa31LG9G13680' => 'aar', 'Aa31LG9G14920' => 'aar', 'Aa31LG9G6650' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4977' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5467' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3254' => 'aag', 'Actinidia02578' => 'ach', 'Actinidia07693' => 'ach', 'Actinidia08413' => 'ach', 'Actinidia08414' => 'ach', 'Actinidia15289' => 'ach', 'Actinidia19871' => 'ach', 'Actinidia21475' => 'ach', 'Actinidia22576' => 'ach', 'Actinidia28327' => 'ach', 'Actinidia32491' => 'ach', 'Actinidia39463' => 'ach', 'Actinidia39571' => 'ach', 'Ah.01g013750' => 'amhyb', 'Ah.01g023210' => 'amhyb', 'Ah.04g164850' => 'amhyb', 'Ah.05g178060' => 'amhyb', 'Ah.07g204270' => 'amhyb', 'Ah.07g208480' => 'amhyb', 'Ah.09g237410' => 'amhyb', 'Ah.14g089460' => 'amhyb', 'AL1G41790' => 'aly', 'AL1G49050' => 'aly', 'AL1G53810' => 'aly', 'AL1G61400' => 'aly', 'AL4G18580' => 'aly', 'AL5G12510' => 'aly', 'AL5G12540' => 'aly', 'AL6G43230' => 'aly', 'AL7G10370' => 'aly', 'AL7G19250' => 'aly', 'AL8G12240' => 'aly', 'AL8G18540' => 'aly', 'Aqoxy1G02409' => 'aox', 'Aqoxy2G03993' => 'aox', 'Aqoxy3G03357' => 'aox', 'Aqoxy4G00785' => 'aox', 'Aqoxy5G02598' => 'aox', 'Aqoxy6G00132' => 'aox', 'Aqoxy7G01776' => 'aox', 'Aqoxy7G02316' => 'aox', 'Aqoxy7G03973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.12AFKW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B8730' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27IQR1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3F75VG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3RE0GA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41TCQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.527VTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FIR39' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5W8UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DA38EV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ63HS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H1I32C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HC27T5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4M8AP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7N3CZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9UVDZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LS1NQA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT1D4B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SKC4TM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCFV76' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF9Q1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQWD9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1ZM88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WE07RT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YCK7VH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJE6Q6' => 'arhy', 'AT1G28240' => 'ath', 'AT1G34550' => 'ath', 'AT1G53040' => 'ath', 'AT2G02910' => 'ath', 'AT4G09630' => 'ath', 'AT4G38500' => 'ath', 'AT5G42660' => 'ath', 'AT5G46220' => 'ath', 'ATR0152G026' => 'atr', 'ATR0564G343' => 'atr', 'ATR0706G151' => 'atr', 'ATR0733G207' => 'atr', 'ATR0751G234' => 'atr', 'ATR0807G048' => 'atr', 'ATR1091G084' => 'atr', 'Atru.chr10.1229' => 'acertr', 'Atru.chr10.1230' => 'acertr', 'Atru.chr10.1874' => 'acertr', 'Atru.chr11.1808' => 'acertr', 'Atru.chr13.1795' => 'acertr', 'Atru.chr13.570' => 'acertr', 'Atru.chr2.2608' => 'acertr', 'Atru.chr2.2609' => 'acertr', 'Atru.chr5.3428' => 'acertr', 'Atru.chr8.1171' => 'acertr', 'AUR62004651' => 'cqu', 'AUR62008675' => 'cqu', 'AUR62010014' => 'cqu', 'AUR62013004' => 'cqu', 'AUR62014825' => 'cqu', 'AUR62015015' => 'cqu', 'AUR62015151' => 'cqu', 'AUR62017020' => 'cqu', 'AUR62019422' => 'cqu', 'AUR62023570' => 'cqu', 'AUR62025571' => 'cqu', 'AUR62029098' => 'cqu', 'AUR62033863' => 'cqu', 'AUR62034296' => 'cqu', 'AUR62040075' => 'cqu', 'BcaB02g07334' => 'bca', 'BcaB02g10575' => 'bca', 'BcaB03g12119' => 'bca', 'BcaB03g12120' => 'bca', 'BcaB03g13945' => 'bca', 'BcaB04g17123' => 'bca', 'BcaB04g17867' => 'bca', 'BcaB04g19839' => 'bca', 'BcaB07g30317' => 'bca', 'BcaB07g32432' => 'bca', 'BcaB07g33362' => 'bca', 'BcaB08g36611' => 'bca', 'BcaC01g00028' => 'bca', 'BcaC01g01356' => 'bca', 'BcaC01g02034' => 'bca', 'BcaC01g06051' => 'bca', 'BcaC03g16839' => 'bca', 'BcaC03g17176' => 'bca', 'BcaC05g26829' => 'bca', 'BcaC06g31490' => 'bca', 'BcaC06g35344' => 'bca', 'BcaC06g36570' => 'bca', 'BcaC07g37537' => 'bca', 'BcaC08g43491' => 'bca', 'BcaC08g43773' => 'bca', 'BcaNung00234' => 'bca', 'BcaNung01982' => 'bca', 'BcaNung03707' => 'bca', 'BcaNung06454' => 'bca', 'BolC2t10762H' => 'bol', 'BolC2t11191H' => 'bol', 'BolC3t14322H' => 'bol', 'BolC3t19747H' => 'bol', 'BolC3t21425H' => 'bol', 'BolC4t27800H' => 'bol', 'BolC5t31423H' => 'bol', 'BolC6t35951H' => 'bol', 'BolC6t36282H' => 'bol', 'BolC7t40678H' => 'bol', 'BolC7t40679H' => 'bol', 'BolC7t42222H' => 'bol', 'BolC7t43492H' => 'bol', 'BolC7t46785H' => 'bol', 'BolC8t47853H' => 'bol', 'BolC9t56805H' => 'bol', 'BraA02t08000Z' => 'bra', 'BraA02t08341Z' => 'bra', 'BraA03t10936Z' => 'bra', 'BraA03t15657Z' => 'bra', 'BraA04t18100Z' => 'bra', 'BraA05t20523Z' => 'bra', 'BraA06t23353Z' => 'bra', 'BraA06t27473Z' => 'bra', 'BraA06t27769Z' => 'bra', 'BraA07t28928Z' => 'bra', 'BraA08t32236Z' => 'bra', 'BraA08t32841Z' => 'bra', 'BraA08t34524Z' => 'bra', 'BraA09t38742Z' => 'bra', 'BraA09t39295Z' => 'bra', 'C02p47180' => 'bna', 'C02p50990' => 'bna', 'C03p19360' => 'bna', 'C03p74950' => 'bna', 'C03p91000' => 'bna', 'C04p63260' => 'bna', 'C05p27050' => 'bna', 'C06p08750' => 'bna', 'C06p11490' => 'bna', 'C07p02820' => 'bna', 'C07p17180' => 'bna', 'C07p29440' => 'bna', 'C07p63730' => 'bna', 'C09p39260' => 'bna', 'CAN.G1164.34' => 'can', 'CAN.G1164.39' => 'can', 'CAN.G1530.3' => 'can', 'CAN.G162.61' => 'can', 'CAN.G176.6' => 'can', 'CAN.G289.49' => 'can', 'CAN.G370.21' => 'can', 'CAN.G370.22' => 'can', 'CAN.G371.117' => 'can', 'CAN.G58.37' => 'can', 'CAN.G588.98' => 'can', 'CANSAT21G2266' => 'cansat', 'CANSAT25G2799' => 'cansat', 'CANSAT35G0862' => 'cansat', 'CANSAT35G1704' => 'cansat', 'CANSAT35G1760' => 'cansat', 'CANSAT56G3971' => 'cansat', 'CANSAT56G4116' => 'cansat', 'CANSAT80G1259' => 'cansat', 'CARHR027730' => 'chi', 'CARHR033880' => 'chi', 'CARHR043270' => 'chi', 'CARHR145330' => 'chi', 'CARHR145340' => 'chi', 'CARHR175570' => 'chi', 'CARHR181570' => 'chi', 'CARHR258470' => 'chi', 'CARHR260490' => 'chi', 'CARHR294220' => 'chi', 'Carub.0001s2668' => 'cru', 'Carub.0001s3257' => 'cru', 'Carub.0001s4220' => 'cru', 'Carub.0005s0179' => 'cru', 'Carub.0006s2807' => 'cru', 'Carub.0007s0039' => 'cru', 'Carub.0008s0169' => 'cru', 'Carub.0008s0636' => 'cru', 'Ca_00338_v3' => 'car', 'Ca_00542_v3' => 'car', 'Ca_01844_v3' => 'car', 'Ca_10611_v3' => 'car', 'Ca_13326_v3' => 'car', 'Ca_17944_v3' => 'car', 'Ca_18546_v3' => 'car', 'Ca_24219_v3' => 'car', 'Ca_29972_v3' => 'car', 'CBR_g3681' => 'cbr', 'CBR_g40021' => 'cbr', 'Cc01_g08140' => 'ccan', 'Cc02_g13410' => 'ccan', 'Cc02_g37480' => 'ccan', 'Cc05_g12030' => 'ccan', 'Cc09_g03370' => 'ccan', 'Cc09_g10300' => 'ccan', 'Cc10_g03530' => 'ccan', 'Cc10_g11380' => 'ccan', 'CDE01G0176' => 'cde', 'CDE02G0675' => 'cde', 'CDE02G0942' => 'cde', 'CDE02G1153' => 'cde', 'CDE02G4177' => 'cde', 'CDE04G2117' => 'cde', 'CDE04G2736' => 'cde', 'CDE08G1161' => 'cde', 'CDE09G1238' => 'cde', 'Cfa000467' => 'cfa', 'Cfa000947' => 'cfa', 'Cfa004969' => 'cfa', 'Cfa005284' => 'cfa', 'Cfa008993' => 'cfa', 'Cfa018187' => 'cfa', 'Cfa018454' => 'cfa', 'Cfa020585' => 'cfa', 'Ciclev10000424m.g' => 'ccl', 'Ciclev10003605m.g' => 'ccl', 'Ciclev10007828m.g' => 'ccl', 'Ciclev10014620m.g' => 'ccl', 'Ciclev10015169m.g' => 'ccl', 'Ciclev10018291m.g' => 'ccl', 'Ciclev10028256m.g' => 'ccl', 'Ciclev10033822m.g' => 'ccl', 'CiPaw.05G060300' => 'cil', 'CiPaw.05G085000' => 'cil', 'CiPaw.06G083700' => 'cil', 'CiPaw.06G120300' => 'cil', 'CiPaw.09G060500' => 'cil', 'CiPaw.09G123800' => 'cil', 'CiPaw.11G169700' => 'cil', 'CiPaw.12G118300' => 'cil', 'CiPaw.15G071000' => 'cil', 'CiPaw.15G081900' => 'cil', 'ClCG01G024610' => 'cla', 'ClCG03G006070' => 'cla', 'ClCG05G019250' => 'cla', 'ClCG09G009500' => 'cla', 'ClCG11G008200' => 'cla', 'ClCG11G018080' => 'cla', 'COL.COLO4_17373' => 'col', 'COL.COLO4_22994' => 'col', 'COL.COLO4_26389' => 'col', 'COL.COLO4_27170' => 'col', 'COL.COLO4_31074' => 'col', 'COL.COLO4_31465' => 'col', 'COL.COLO4_36438' => 'col', 'COL.COLO4_36439' => 'col', 'Cpa.g.c38781' => 'cpa', 'Cpa.g.sc128.12' => 'cpa', 'Cpa.g.sc166.7' => 'cpa', 'Cpa.g.sc166.8' => 'cpa', 'Cpa.g.sc20.111' => 'cpa', 'Cpa.g.sc27.31' => 'cpa', 'Cpa.g.sc64.36' => 'cpa', 'Cpa.g.sc64.37' => 'cpa', 'Cpa.g.sc66.49' => 'cpa', 'Cpa.g.sc80.64' => 'cpa', 'CsaV3_1G012320' => 'csa', 'CsaV3_2G008480' => 'csa', 'CsaV3_2G033450' => 'csa', 'CsaV3_3G044830' => 'csa', 'CsaV3_4G033710' => 'csa', 'CsaV3_6G051730' => 'csa', 'CsaV3_7G025350' => 'csa', 'CSS0001067' => 'camsi', 'CSS0005996' => 'camsi', 'CSS0006590' => 'camsi', 'CSS0009673' => 'camsi', 'CSS0010201' => 'camsi', 'CSS0010549' => 'camsi', 'CSS0011364' => 'camsi', 'CSS0014473' => 'camsi', 'CSS0014961' => 'camsi', 'CSS0020191' => 'camsi', 'CSS0021165' => 'camsi', 'CSS0022306' => 'camsi', 'CSS0030591' => 'camsi', 'CSS0030696' => 'camsi', 'CSS0032653' => 'camsi', 'CSS0037487' => 'camsi', 'CSS0041102' => 'camsi', 'CSS0041261' => 'camsi', 'CSS0046246' => 'camsi', 'CSS0049256' => 'camsi', 'DCAR_004075' => 'dca', 'DCAR_011538' => 'dca', 'DCAR_019553' => 'dca', 'DCAR_020952' => 'dca', 'DCAR_021739' => 'dca', 'DCAR_027407' => 'dca', 'DCAR_027913' => 'dca', 'DCAR_028066' => 'dca', 'Dinv05899' => 'din', 'Dinv07563' => 'din', 'Dinv08010' => 'din', 'Dinv14125' => 'din', 'Dinv20172' => 'din', 'Dinv30743' => 'din', 'Dinv31229' => 'din', 'Dinv34162' => 'din', 'Dinv36028' => 'din', 'Dinv39368' => 'din', 'Dinv40565' => 'din', 'Dinv41706' => 'din', 'Duzib052G0089' => 'dzi', 'Duzib116G0641' => 'dzi', 'Duzib132G0069' => 'dzi', 'Duzib132G1219' => 'dzi', 'Duzib147G0278' => 'dzi', 'Duzib160G0480' => 'dzi', 'Duzib170G0661' => 'dzi', 'Duzib177G0591' => 'dzi', 'Duzib187G1353' => 'dzi', 'Duzib192G0858' => 'dzi', 'Duzib192G0883' => 'dzi', 'Duzib213G0506' => 'dzi', 'Duzib235G0289' => 'dzi', 'Duzib251G0422' => 'dzi', 'ECA232G3898' => 'eca', 'ECA233G5950' => 'eca', 'ECA234G1699' => 'eca', 'ECA234G2421' => 'eca', 'ECA236G0426' => 'eca', 'ECA236G4331' => 'eca', 'ECA248G2573' => 'eca', 'EL10Ac1g00077' => 'bvu', 'EL10Ac1g01746' => 'bvu', 'EL10Ac2g03464' => 'bvu', 'EL10Ac4g08176' => 'bvu', 'EL10Ac7g17521' => 'bvu', 'EL10Ac8g20386' => 'bvu', 'EL10Ac9g21343' => 'bvu', 'EL10Ac9g22688' => 'bvu', 'Eucgr.B03434' => 'egr', 'Eucgr.D00618' => 'egr', 'Eucgr.E02395' => 'egr', 'Eucgr.F01129' => 'egr', 'Eucgr.F02622' => 'egr', 'Eucgr.F04207' => 'egr', 'FAN01G0570' => 'fan', 'FAN03G3351' => 'fan', 'FAN06G3702' => 'fan', 'FAN07G2149' => 'fan', 'FAN10G3758' => 'fan', 'FAN11G1170' => 'fan', 'FAN11G2050' => 'fan', 'FAN11G2724' => 'fan', 'FAN12G1700' => 'fan', 'FAN12G2028' => 'fan', 'FAN15G1160' => 'fan', 'FAN15G3063' => 'fan', 'FAN16G2540' => 'fan', 'FAN16G3077' => 'fan', 'FAN16G3624' => 'fan', 'FAN17G0221' => 'fan', 'FAN20G2492' => 'fan', 'FAN20G2905' => 'fan', 'FAN21G0548' => 'fan', 'FAN21G1300' => 'fan', 'FAN22G0077' => 'fan', 'FAN22G1315' => 'fan', 'FAN24G1280' => 'fan', 'FAN24G1445' => 'fan', 'FAN24G3527' => 'fan', 'FAN25G0464' => 'fan', 'FAN25G2885' => 'fan', 'FAN25G3270' => 'fan', 'FAN27G1101' => 'fan', 'FAN27G2846' => 'fan', 'FAN27G3524' => 'fan', 'FvH4_2g11770' => 'fve', 'FvH4_2g15630' => 'fve', 'FvH4_3g05570' => 'fve', 'FvH4_3g09110' => 'fve', 'FvH4_3g19940' => 'fve', 'FvH4_4g04821' => 'fve', 'FvH4_4g31480' => 'fve', 'FvH4_7g01740' => 'fve', 'Glyma.05G130400' => 'gma', 'Glyma.05G156400' => 'gma', 'Glyma.07G197000' => 'gma', 'Glyma.08G085151' => 'gma', 'Glyma.08G114500' => 'gma', 'Glyma.08G300400' => 'gma', 'Glyma.10G215800' => 'gma', 'Glyma.12G224400' => 'gma', 'Glyma.13G179300' => 'gma', 'Glyma.13G218151' => 'gma', 'Glyma.13G238800' => 'gma', 'Glyma.13G276900' => 'gma', 'Glyma.14G078200' => 'gma', 'Glyma.15G074500' => 'gma', 'Glyma.15G094100' => 'gma', 'Glyma.17G247200' => 'gma', 'Glyma.18G120100' => 'gma', 'Glyma.20G176000' => 'gma', 'Gohir.A01G063600' => 'ghi', 'Gohir.A01G170301' => 'ghi', 'Gohir.A02G060500' => 'ghi', 'Gohir.A05G133850' => 'ghi', 'Gohir.A05G161400' => 'ghi', 'Gohir.A06G012900' => 'ghi', 'Gohir.A06G035901' => 'ghi', 'Gohir.A06G127100' => 'ghi', 'Gohir.A06G210500' => 'ghi', 'Gohir.A08G008650' => 'ghi', 'Gohir.A09G072700' => 'ghi', 'Gohir.A09G088301' => 'ghi', 'Gohir.A10G040600' => 'ghi', 'Gohir.A12G036300' => 'ghi', 'Gohir.A12G143350' => 'ghi', 'Gohir.A12G165500' => 'ghi', 'Gohir.A13G145700' => 'ghi', 'Gohir.D01G050000' => 'ghi', 'Gohir.D01G051366' => 'ghi', 'Gohir.D01G161350' => 'ghi', 'Gohir.D02G065900' => 'ghi', 'Gohir.D05G164200' => 'ghi', 'Gohir.D05G355500' => 'ghi', 'Gohir.D06G010400' => 'ghi', 'Gohir.D06G111250' => 'ghi', 'Gohir.D06G132000' => 'ghi', 'Gohir.D06G210500' => 'ghi', 'Gohir.D07G165675' => 'ghi', 'Gohir.D08G062240' => 'ghi', 'Gohir.D08G086101' => 'ghi', 'Gohir.D08G138060' => 'ghi', 'Gohir.D09G072300' => 'ghi', 'Gohir.D10G041400' => 'ghi', 'Gohir.D11G191020' => 'ghi', 'Gohir.D11G212066' => 'ghi', 'Gohir.D12G036300' => 'ghi', 'Gohir.D12G168600' => 'ghi', 'Gohir.D13G150600' => 'ghi', 'Gorai.001G057300' => 'gra', 'Gorai.002G069900' => 'gra', 'Gorai.002G200000' => 'gra', 'Gorai.003G067600' => 'gra', 'Gorai.005G074800' => 'gra', 'Gorai.006G087300' => 'gra', 'Gorai.008G037500' => 'gra', 'Gorai.008G181400' => 'gra', 'Gorai.009G169400' => 'gra', 'Gorai.009G387900' => 'gra', 'Gorai.010G013300' => 'gra', 'Gorai.010G153800' => 'gra', 'Gorai.010G255800' => 'gra', 'Gorai.011G043700' => 'gra', 'Gorai.011G198900' => 'gra', 'Gorai.013G168400' => 'gra', 'GSVIVG01005212001' => 'vvi', 'GSVIVG01006163001' => 'vvi', 'GSVIVG01009625001' => 'vvi', 'GSVIVG01014338001' => 'vvi', 'GSVIVG01020005001' => 'vvi', 'GSVIVG01021450001' => 'vvi', 'GSVIVG01023975001' => 'vvi', 'GSVIVG01034490001' => 'vvi', 'HanXRQChr04g0112071' => 'han', 'HanXRQChr05g0131151' => 'han', 'HanXRQChr09g0262371' => 'han', 'HanXRQChr09g0268401' => 'han', 'HanXRQChr10g0279241' => 'han', 'HanXRQChr10g0297961' => 'han', 'HanXRQChr11g0326231' => 'han', 'HanXRQChr11g0328471' => 'han', 'HanXRQChr16g0507941' => 'han', 'HanXRQChr17g0560211' => 'han', 'Haze_02108' => 'cav', 'Haze_02428' => 'cav', 'Haze_05593' => 'cav', 'Haze_06448' => 'cav', 'Haze_09427' => 'cav', 'Haze_12022' => 'cav', 'Haze_17612' => 'cav', 'Haze_17928' => 'cav', 'Hma1.2p1_0032F.1_g019250' => 'hma', 'Hma1.2p1_0163F.1_g072690' => 'hma', 'Hma1.2p1_0265F.1_g106710' => 'hma', 'Hma1.2p1_0286F.1_g113970' => 'hma', 'Hma1.2p1_0363F.1_g136640' => 'hma', 'Hma1.2p1_0584F.1_g183470' => 'hma', 'Hma1.2p1_0885F.1_g232570' => 'hma', 'HPP92_006022' => 'vpl', 'HPP92_007320' => 'vpl', 'HPP92_011521' => 'vpl', 'HPP92_019387' => 'vpl', 'HPP92_024038' => 'vpl', 'Hund05891' => 'sun', 'Hund06450' => 'sun', 'Hund12053' => 'sun', 'Hund16800' => 'sun', 'Hund21222' => 'sun', 'Hund22896' => 'sun', 'Hund23746' => 'sun', 'Hund27083' => 'sun', 'Lalb_Chr02g0141831' => 'lal', 'Lalb_Chr02g0141841' => 'lal', 'Lalb_Chr05g0220411' => 'lal', 'Lalb_Chr06g0162081' => 'lal', 'Lalb_Chr09g0327651' => 'lal', 'Lalb_Chr13g0295051' => 'lal', 'Lalb_Chr15g0086801' => 'lal', 'Lalb_Chr16g0383781' => 'lal', 'Lalb_Chr16g0383791' => 'lal', 'Lalb_Chr18g0055441' => 'lal', 'Lalb_Chr18g0059611' => 'lal', 'Lalb_Chr20g0109661' => 'lal', 'Lalb_Chr20g0109831' => 'lal', 'Lalb_Chr20g0121871' => 'lal', 'Lalb_Chr22g0355361' => 'lal', 'Lalb_Chr25g0286371' => 'lal', 'Lj1A1187G43' => 'lonja', 'Lj1A1205T50' => 'lonja', 'Lj1A800G33' => 'lonja', 'Lj1C1187T7' => 'lonja', 'Lj1C843T11' => 'lonja', 'Lj1g0010940' => 'lja', 'Lj2A288T69' => 'lonja', 'Lj3g0024276' => 'lja', 'Lj4A47T76' => 'lonja', 'Lj4g0005805' => 'lja', 'Lj4g0006097' => 'lja', 'Lj4g0008528' => 'lja', 'Lj4g0024907' => 'lja', 'Lj5g0012472' => 'lja', 'Lj5g0018648' => 'lja', 'Lj6C789G1' => 'lonja', 'Lj6g0004000' => 'lja', 'Lj7A292G67' => 'lonja', 'Lj7A292T64' => 'lonja', 'Lj9A400T58' => 'lonja', 'Lsat_1_v5_gn_1_126181' => 'lsa', 'Lsat_1_v5_gn_4_123041' => 'lsa', 'Lsat_1_v5_gn_4_133620' => 'lsa', 'Lsat_1_v5_gn_4_53221' => 'lsa', 'Lsat_1_v5_gn_4_71961' => 'lsa', 'Lsat_1_v5_gn_7_105241' => 'lsa', 'Lsat_1_v5_gn_7_21361' => 'lsa', 'Lsat_1_v5_gn_7_28860' => 'lsa', 'Lsat_1_v5_gn_7_31260' => 'lsa', 'Lsat_1_v5_gn_8_52801' => 'lsa', 'Manes.02G191400' => 'mes', 'Manes.03G110100' => 'mes', 'Manes.04G071100' => 'mes', 'Manes.05G100500' => 'mes', 'Manes.05G164700' => 'mes', 'Manes.15G087000' => 'mes', 'Manes.15G121500' => 'mes', 'Manes.16G028300' => 'mes', 'Manes.17G046100' => 'mes', 'Manes.17G069800' => 'mes', 'Manes.18G100500' => 'mes', 'Mapoly0002s0109' => 'mpo', 'Mapoly0024s0007' => 'mpo', 'Mapoly0089s0032' => 'mpo', 'MBI04_g42241_MAGBIO' => 'mbi', 'MBI05_g11988_MAGBIO' => 'mbi', 'MBI05_g35452_MAGBIO' => 'mbi', 'MBI07_g30179_MAGBIO' => 'mbi', 'MBI07_g35859_MAGBIO' => 'mbi', 'MBI07_g35860_MAGBIO' => 'mbi', 'MBI07_g37166_MAGBIO' => 'mbi', 'MBI08_g18172_MAGBIO' => 'mbi', 'MBI09_g08441_MAGBIO' => 'mbi', 'MBI13_g01676_MAGBIO' => 'mbi', 'MBI14_g42955_MAGBIO' => 'mbi', 'MBI16_g13161_MAGBIO' => 'mbi', 'MBI17_g27204_MAGBIO' => 'mbi', 'MBI19_g21595_MAGBIO' => 'mbi', 'MD00G1148400' => 'mdo', 'MD02G1301200' => 'mdo', 'MD03G1227800' => 'mdo', 'MD05G1041100' => 'mdo', 'MD05G1124800' => 'mdo', 'MD05G1284000' => 'mdo', 'MD05G1338800' => 'mdo', 'MD05G1338900' => 'mdo', 'MD07G1022800' => 'mdo', 'MD10G1047500' => 'mdo', 'MD10G1127500' => 'mdo', 'MD10G1262300' => 'mdo', 'MD10G1293800' => 'mdo', 'MD16G1074300' => 'mdo', 'Medtr1g021670' => 'mtr', 'Medtr1g096320' => 'mtr', 'Medtr2g013690' => 'mtr', 'Medtr2g019450' => 'mtr', 'Medtr2g085170' => 'mtr', 'Medtr4g088785' => 'mtr', 'Medtr8g055930' => 'mtr', 'Medtr8g085850' => 'mtr', 'MELO3C002605.2' => 'cme', 'MELO3C003891.2' => 'cme', 'MELO3C004012.2' => 'cme', 'MELO3C007134.2' => 'cme', 'MELO3C008118.2' => 'cme', 'MELO3C016700.2' => 'cme', 'MELO3C024127.2' => 'cme', 'MELO3C033361.2' => 'cme', 'MELO3C033362.2' => 'cme', 'Migut.C00430' => 'egut', 'Migut.C01246' => 'egut', 'Migut.E00101' => 'egut', 'Migut.H01486' => 'egut', 'Migut.H01939' => 'egut', 'Migut.K00360' => 'egut', 'Migut.M00910' => 'egut', 'Migut.M01139' => 'egut', 'Migut.N02677' => 'egut', 'MSTRG.13252' => 'ama', 'MSTRG.14701' => 'ama', 'MSTRG.1521' => 'ama', 'MSTRG.15884' => 'ama', 'MSTRG.16242' => 'ama', 'MSTRG.22285' => 'ama', 'MSTRG.22444' => 'ama', 'MSTRG.2349' => 'ama', 'MSTRG.26308' => 'ama', 'MSTRG.28296' => 'ama', 'MSTRG.9895' => 'ama', 'Nitab4.5_0000110g0060' => 'nta', 'Nitab4.5_0000420g0130' => 'nta', 'Nitab4.5_0000422g0030' => 'nta', 'Nitab4.5_0000560g0180' => 'nta', 'Nitab4.5_0000703g0100' => 'nta', 'Nitab4.5_0000786g0200' => 'nta', 'Nitab4.5_0001336g0020' => 'nta', 'Nitab4.5_0001796g0030' => 'nta', 'Nitab4.5_0003348g0060' => 'nta', 'Nitab4.5_0003698g0040' => 'nta', 'Nitab4.5_0003942g0090' => 'nta', 'Nitab4.5_0004775g0070' => 'nta', 'Nitab4.5_0004864g0030' => 'nta', 'Nitab4.5_0005615g0020' => 'nta', 'Nitab4.5_0009288g0030' => 'nta', 'Nitab4.5_0009341g0010' => 'nta', 'Nitab4.5_0009535g0010' => 'nta', 'Nn1g03995' => 'nnu', 'Nn1g04100' => 'nnu', 'Nn1g06530' => 'nnu', 'Nn3g16404' => 'nnu', 'Nn3g17212' => 'nnu', 'Nn3g20776' => 'nnu', 'Nn3g21923' => 'nnu', 'Nn5g27737' => 'nnu', 'Nn5g29461' => 'nnu', 'Nn7g38355' => 'nnu', 'Nn8g39873' => 'nnu', 'Oeu000548.2' => 'oeu', 'Oeu004672.1' => 'oeu', 'Oeu015605.2' => 'oeu', 'Oeu016092.1' => 'oeu', 'Oeu017879.3' => 'oeu', 'Oeu024910.1' => 'oeu', 'Oeu028965.1' => 'oeu', 'Oeu031269.1' => 'oeu', 'Oeu031270.1' => 'oeu', 'Oeu032535.1' => 'oeu', 'Oeu034151.1' => 'oeu', 'Oeu034152.1' => 'oeu', 'Oeu034588.2' => 'oeu', 'Oeu050846.1' => 'oeu', 'Oeu050849.2' => 'oeu', 'Oeu051063.2' => 'oeu', 'Oeu052368.1' => 'oeu', 'Oeu052370.1' => 'oeu', 'Os01g0210400' => 'osa', 'Os01g0304300' => 'osa', 'Os01g0749100' => 'osa', 'Os02g0745800' => 'osa', 'Os03g0769050' => 'osa', 'Os05g0531500' => 'osa', 'Os06g0724300' => 'osa', 'Os11g0198100' => 'osa', 'Peaxi162Scf00069g01425' => 'pax', 'Peaxi162Scf00280g00811' => 'pax', 'Peaxi162Scf00310g00615' => 'pax', 'Peaxi162Scf00362g00542' => 'pax', 'Peaxi162Scf00461g00310' => 'pax', 'Peaxi162Scf00530g00118' => 'pax', 'Peaxi162Scf00541g00057' => 'pax', 'Peaxi162Scf00661g00017' => 'pax', 'Peaxi162Scf00926g00027' => 'pax', 'Peaxi162Scf01064g00263' => 'pax', 'Peaxi162Scf01211g00135' => 'pax', 'PGR004G2336' => 'pgr', 'PGR042G0327' => 'pgr', 'PGR042G1957' => 'pgr', 'PGR042G2003' => 'pgr', 'PGR042G3929' => 'pgr', 'PGR083G1137' => 'pgr', 'PGR083G1364' => 'pgr', 'PGSC0003DMG400003381' => 'stu', 'PGSC0003DMG400003417' => 'stu', 'PGSC0003DMG400008981' => 'stu', 'PGSC0003DMG400012417' => 'stu', 'PGSC0003DMG400012823' => 'stu', 'PGSC0003DMG400016885' => 'stu', 'PGSC0003DMG400022812' => 'stu', 'PGSC0003DMG400029726' => 'stu', 'PGSC0003DMG401009243' => 'stu', 'PGSC0003DMG401031505' => 'stu', 'PGSC0003DMG402031505' => 'stu', 'Phvul.001G017600' => 'pvu', 'Phvul.002G193500' => 'pvu', 'Phvul.002G228900' => 'pvu', 'Phvul.002G236800' => 'pvu', 'Phvul.003G049500' => 'pvu', 'Phvul.005G072000' => 'pvu', 'Phvul.006G164800' => 'pvu', 'Phvul.006G185100' => 'pvu', 'Phvul.007G090000' => 'pvu', 'Potri.001G399800' => 'ptr', 'Potri.002G149900' => 'ptr', 'Potri.004G044100' => 'ptr', 'Potri.004G177600' => 'ptr', 'Potri.009G138000' => 'ptr', 'Potri.010G094000' => 'ptr', 'Potri.011G053000' => 'ptr', 'Potri.011G119300' => 'ptr', 'Potri.013G113700' => 'ptr', 'Potri.018G107800' => 'ptr', 'Potri.019G084100' => 'ptr', 'Pp3c14_23720' => 'ppa', 'Pp3c16_6340' => 'ppa', 'Pp3c23_13420' => 'ppa', 'Pp3c24_2740' => 'ppa', 'Pp3c25_860' => 'ppa', 'Pp3c8_21750' => 'ppa', 'Prupe.1G273000' => 'ppe', 'Prupe.1G273700' => 'ppe', 'Prupe.1G274100' => 'ppe', 'Prupe.2G023300' => 'ppe', 'Prupe.4G048000' => 'ppe', 'Prupe.4G080400' => 'ppe', 'Prupe.4G181200' => 'ppe', 'Prupe.8G056900' => 'ppe', 'Prupe.8G168700' => 'ppe', 'Psat1g189080' => 'psa', 'Psat1g204760' => 'psa', 'Psat4g175560' => 'psa', 'Psat4g177720' => 'psa', 'Psat5g244240' => 'psa', 'Psat6g010720' => 'psa', 'Psat6g187200' => 'psa', 'Psat7g072040' => 'psa', 'PSO017G3501' => 'pso', 'PSO063G2148' => 'pso', 'PSO063G5608' => 'pso', 'PSO210G6392' => 'pso', 'PSO541G2319' => 'pso', 'PSO541G2836' => 'pso', 'PSO541G4012' => 'pso', 'PSO541G6253' => 'pso', 'PSO675G0580' => 'pso', 'PSO675G0856' => 'pso', 'PSO675G5635' => 'pso', 'PSO675G9157' => 'pso', 'PSO832G1660' => 'pso', 'PSO832G1969' => 'pso', 'QL02p007186' => 'qlo', 'QL02p033904' => 'qlo', 'QL03p064391' => 'qlo', 'QL05p040593' => 'qlo', 'QL05p058242' => 'qlo', 'QL08p021825' => 'qlo', 'QL11p004981' => 'qlo', 'RcHm_v2.0_Chr1g0318301' => 'rch', 'RcHm_v2.0_Chr4g0418501' => 'rch', 'RcHm_v2.0_Chr4g0439971' => 'rch', 'RcHm_v2.0_Chr5g0008541' => 'rch', 'RcHm_v2.0_Chr5g0014101' => 'rch', 'RcHm_v2.0_Chr5g0014131' => 'rch', 'RcHm_v2.0_Chr5g0033621' => 'rch', 'RcHm_v2.0_Chr6g0272041' => 'rch', 'RcHm_v2.0_Chr6g0278831' => 'rch', 'Rhsim02G0130400' => 'rsi', 'Rhsim02G0171100' => 'rsi', 'Rhsim05G0053000' => 'rsi', 'Rhsim05G0053100' => 'rsi', 'Rhsim06G0096500' => 'rsi', 'Rhsim06G0096600' => 'rsi', 'Rhsim06G0199100' => 'rsi', 'Rhsim12G0062300' => 'rsi', 'Rhsim12G0062800' => 'rsi', 'Sabra02G0118600' => 'sbr', 'Sabra04G0027300' => 'sbr', 'Sabra04G0119500' => 'sbr', 'Sabra08G0112500' => 'sbr', 'Sabra11G0036800' => 'sbr', 'Sabra11G0103800' => 'sbr', 'Sabra13G0096300' => 'sbr', 'Sabra16G0262300' => 'sbr', 'Sabra18G0091700' => 'sbr', 'Sabra19G0095400' => 'sbr', 'SalBow6G3080' => 'sbo', 'SalBow7G1157' => 'sbo', 'SalBow7G2123' => 'sbo', 'SalBow7G2285' => 'sbo', 'SalBow7G3537' => 'sbo', 'SalBow8G2947' => 'sbo', 'SalBow8G4463' => 'sbo', 'SalBow8G5466' => 'sbo', 'Sc01g0001750' => 'sci', 'Sc02g0006640' => 'sci', 'Sc02g0006670' => 'sci', 'Sc04g0008220' => 'sci', 'Sc05g0006190' => 'sci', 'Sc08g0002760' => 'sci', 'Sc17g0006170' => 'sci', 'Sc22g0002050' => 'sci', 'Sc23g0001190' => 'sci', 'Sc24g0000980' => 'sci', 'Sed0006245' => 'sed', 'Sed0007543' => 'sed', 'Sed0009411' => 'sed', 'Sed0010765' => 'sed', 'Sed0012944' => 'sed', 'Sed0014682' => 'sed', 'Sed0016174' => 'sed', 'Sed0016796' => 'sed', 'Sed0020317' => 'sed', 'Sed0021467' => 'sed', 'SEGI_01316' => 'sgi', 'SEGI_03374' => 'sgi', 'SEGI_16265' => 'sgi', 'SEGI_18569' => 'sgi', 'SEGI_20351' => 'sgi', 'SEGI_26395' => 'sgi', 'SEGI_29469' => 'sgi', 'SEGI_34771' => 'sgi', 'SEGI_36769' => 'sgi', 'SEGI_37139' => 'sgi', 'SGA_v2.0_scaffold100G29687' => 'sas', 'SGA_v2.0_scaffold118G32472' => 'sas', 'SGA_v2.0_scaffold14G07051' => 'sas', 'SGA_v2.0_scaffold183G39845' => 'sas', 'SGA_v2.0_scaffold1G00174' => 'sas', 'SGA_v2.0_scaffold22G09714' => 'sas', 'SGA_v2.0_scaffold333G48992' => 'sas', 'SGA_v2.0_scaffold46G17491' => 'sas', 'SGA_v2.0_scaffold49G18294' => 'sas', 'SGA_v2.0_scaffold63G21658' => 'sas', 'SHI01741' => 'shi', 'SHI05771' => 'shi', 'SHI18077' => 'shi', 'SHI20525' => 'shi', 'SHI20527' => 'shi', 'SHI20528' => 'shi', 'SMO172G0185' => 'smo', 'SMO198G0020' => 'smo', 'SMO351G0006' => 'smo', 'SMO356G0118' => 'smo', 'SMO358G0296' => 'smo', 'SMO367G0079' => 'smo', 'SMO367G1277' => 'smo', 'Solyc01g014220.3' => 'sly', 'Solyc01g111770.2' => 'sly', 'Solyc02g078180.3' => 'sly', 'Solyc03g006430.3' => 'sly', 'Solyc03g006456.1' => 'sly', 'Solyc03g079860.2' => 'sly', 'Solyc04g079770.3' => 'sly', 'Solyc05g007430.4' => 'sly', 'Solyc07g063150.3' => 'sly', 'Solyc08g016620.3' => 'sly', 'Solyc09g057590.3' => 'sly', 'Solyc09g057600.1' => 'sly', 'Solyc10g009050.3' => 'sly', 'Solyc11g017420.2' => 'sly', 'Sopen01g053810' => 'spe', 'Sopen02g023040' => 'spe', 'Sopen03g002440' => 'spe', 'Sopen04g033350' => 'spe', 'Sopen05g003310' => 'spe', 'Sopen07g004050' => 'spe', 'Sopen07g031340' => 'spe', 'Sopen08g006990' => 'spe', 'Sopen10g004830' => 'spe', 'Sopen11g009370' => 'spe', 'Sp1g24450' => 'spa', 'Sp1g29670' => 'spa', 'Sp1g39600' => 'spa', 'Sp2g11080' => 'spa', 'Sp2g13970' => 'spa', 'Sp4g16130' => 'spa', 'Sp6g13080' => 'spa', 'Sp7g37270' => 'spa', 'TAR371G0065' => 'tar', 'TAR376G0340' => 'tar', 'TAR376G0435' => 'tar', 'TAR381G0002' => 'tar', 'TAR381G1236' => 'tar', 'TAR624G0055' => 'tar', 'TAR624G0324' => 'tar', 'TAR624G0696' => 'tar', 'TAR624G0906' => 'tar', 'TAR625G0107' => 'tar', 'TAR626G0015' => 'tar', 'TAR626G1356' => 'tar', 'TAR627G0888' => 'tar', 'TAR628G0399' => 'tar', 'TAR628G1327' => 'tar', 'TAR629G2831' => 'tar', 'TAR629G2874' => 'tar', 'TAR633G1432' => 'tar', 'TAR633G2771' => 'tar', 'THA.LOC104803394' => 'tha', 'THA.LOC104805153' => 'tha', 'THA.LOC104806784' => 'tha', 'THA.LOC104810473' => 'tha', 'THA.LOC104813100' => 'tha', 'THA.LOC104814215' => 'tha', 'THA.LOC104815554' => 'tha', 'THA.LOC104820544' => 'tha', 'THA.LOC104824754' => 'tha', 'THA.LOC104827717' => 'tha', 'Thecc.02G031400' => 'tca', 'Thecc.02G055900' => 'tca', 'Thecc.02G350800' => 'tca', 'Thecc.06G150900' => 'tca', 'Thecc.06G186600' => 'tca', 'Thecc.07G089600' => 'tca', 'Thecc.08G020400' => 'tca', 'Thecc.08G182100' => 'tca', 'Thhalv10000873m.g' => 'esa', 'Thhalv10004185m.g' => 'esa', 'Thhalv10006981m.g' => 'esa', 'Thhalv10007204m.g' => 'esa', 'Thhalv10011374m.g' => 'esa', 'Thhalv10013482m.g' => 'esa', 'Thhalv10017801m.g' => 'esa', 'Thhalv10024983m.g' => 'esa', 'TPR.G12072' => 'tpr', 'TPR.G15769' => 'tpr', 'TPR.G16504' => 'tpr', 'TPR.G16506' => 'tpr', 'TPR.G24345' => 'tpr', 'TPR.G26666' => 'tpr', 'TPR.G27320' => 'tpr', 'TPR.G31819' => 'tpr', 'TPR.G38879' => 'tpr', 'TPR.G39015' => 'tpr', 'TPR.G8819' => 'tpr', 'TWI09G0924' => 'twi', 'TWI12G0811' => 'twi', 'TWI12G1294' => 'twi', 'TWI31G0150' => 'twi', 'TWI36G1262' => 'twi', 'TWI38G1287' => 'twi', 'TWI38G1633' => 'twi', 'TWI38G1982' => 'twi', 'TWI39G0116' => 'twi', 'TWI60G1011' => 'twi', 'TWI63G0171' => 'twi', 'TWI73G0839' => 'twi', 'TWI79G1511' => 'twi', 'unitig_0.g915' => 'ugi', 'unitig_0.g916' => 'ugi', 'unitig_21.g20219' => 'ugi', 'unitig_21.g20416' => 'ugi', 'unitig_578.g16132' => 'ugi', 'unitig_578.g16718' => 'ugi', 'unitig_62.g23481' => 'ugi', 'unitig_744.g24535' => 'ugi', 'unitig_749.g13525' => 'ugi', 'vmacro01248' => 'vma', 'vmacro02290' => 'vma', 'vmacro10946' => 'vma', 'vmacro11865' => 'vma', 'vmacro12493' => 'vma', 'vmacro17322' => 'vma', 'vmacro21599' => 'vma', 'vmacro23041' => 'vma', 'VMungo0251G0004' => 'vmu', 'VMungo0251G2639' => 'vmu', 'VMungo0251G2967' => 'vmu', 'VMungo0540G0864' => 'vmu', 'VMungo0540G1569' => 'vmu', 'VMungo0647G0317' => 'vmu', 'VMungo0720G1373' => 'vmu', 'VMungo0720G1508' => 'vmu', 'VMungo1080G0485' => 'vmu', 'VMungo1215G3177' => 'vmu', 'Zm00001eb112600' => 'zma', 'Zm00001eb120220' => 'zma', 'Zm00001eb153240' => 'zma', 'Zm00001eb168880' => 'zma', 'Zm00001eb213920' => 'zma', 'Zm00001eb228280' => 'zma', 'Zm00001eb254580' => 'zma', 'Zm00001eb272180' => 'zma', 'Zm00001eb293190' => 'zma', 'Zm00001eb322930' => 'zma', 'Zm00001eb353360' => 'zma', 'Zm00001eb353390' => 'zma', 'Zm00001eb353430' => 'zma', 'Zm00001eb353440' => 'zma', 'Zm00001eb353780' => 'zma' ) $gf_id = 'HOM05D000499' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000499' ) $data_identifier = 'HOM05D000499' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 29, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 12, 'amhyb' => (int) 8, 'aly' => (int) 12, 'aox' => (int) 9, 'arhy' => (int) 26, 'ath' => (int) 8, 'atr' => (int) 7, 'acertr' => (int) 10, 'cqu' => (int) 15, 'bca' => (int) 29, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 11, 'cansat' => (int) 8, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 9, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 8, 'cpa' => (int) 10, 'csa' => (int) 7, 'camsi' => (int) 20, 'dca' => (int) 8, 'din' => (int) 12, 'dzi' => (int) 14, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 6, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 38, 'gra' => (int) 16, 'vvi' => (int) 8, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 5, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 11, 'lja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 11, 'mpo' => (int) 3, 'mbi' => (int) 14, 'mdo' => (int) 14, 'mtr' => (int) 8, 'cme' => (int) 9, 'egut' => (int) 9, 'ama' => (int) 11, 'nta' => (int) 17, 'nnu' => (int) 11, 'oeu' => (int) 18, 'osa' => (int) 8, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 6, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 9, 'rsi' => (int) 9, 'sbr' => (int) 10, 'sbo' => (int) 8, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 10, 'sas' => (int) 10, 'shi' => (int) 6, 'smo' => (int) 7, 'sly' => (int) 14, 'spe' => (int) 10, 'spa' => (int) 8, 'tar' => (int) 19, 'tha' => (int) 10, 'tca' => (int) 8, 'esa' => (int) 8, 'tpr' => (int) 11, 'twi' => (int) 13, 'ugi' => (int) 9, 'vma' => (int) 8, 'vmu' => (int) 10, 'zma' => (int) 15 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb353780' $species_info = array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ) $local_species = 'ppe' $disabled = '' $selected = '' $num_hits = (int) 0
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000499', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1066', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p29780' => 'bna', 'A02p33180' => 'bna', 'A03p16470' => 'bna', 'A03p66010' => 'bna', 'A04p25970' => 'bna', 'A06p01270' => 'bna', 'A06p46080' => 'bna', 'A07p11400' => 'bna', 'A08p01840' => 'bna', 'A08p08230' => 'bna', 'A08p25740' => 'bna', 'A09p32070' => 'bna', 'A09p37830' => 'bna', 'A09p42840' => 'bna', 'A09p42850' => 'bna', 'Aa31LG10G2060' => 'aar', 'Aa31LG2G7410' => 'aar', 'Aa31LG6G10200' => 'aar', 'Aa31LG6G16680' => 'aar', 'Aa31LG6G8470' => 'aar', 'Aa31LG9G12730' => 'aar', 'Aa31LG9G13680' => 'aar', 'Aa31LG9G14920' => 'aar', 'Aa31LG9G6650' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4977' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5467' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3254' => 'aag', 'Actinidia02578' => 'ach', 'Actinidia07693' => 'ach', 'Actinidia08413' => 'ach', 'Actinidia08414' => 'ach', 'Actinidia15289' => 'ach', 'Actinidia19871' => 'ach', 'Actinidia21475' => 'ach', 'Actinidia22576' => 'ach', 'Actinidia28327' => 'ach', 'Actinidia32491' => 'ach', 'Actinidia39463' => 'ach', 'Actinidia39571' => 'ach', 'Ah.01g013750' => 'amhyb', 'Ah.01g023210' => 'amhyb', 'Ah.04g164850' => 'amhyb', 'Ah.05g178060' => 'amhyb', 'Ah.07g204270' => 'amhyb', 'Ah.07g208480' => 'amhyb', 'Ah.09g237410' => 'amhyb', 'Ah.14g089460' => 'amhyb', 'AL1G41790' => 'aly', 'AL1G49050' => 'aly', 'AL1G53810' => 'aly', 'AL1G61400' => 'aly', 'AL4G18580' => 'aly', 'AL5G12510' => 'aly', 'AL5G12540' => 'aly', 'AL6G43230' => 'aly', 'AL7G10370' => 'aly', 'AL7G19250' => 'aly', 'AL8G12240' => 'aly', 'AL8G18540' => 'aly', 'Aqoxy1G02409' => 'aox', 'Aqoxy2G03993' => 'aox', 'Aqoxy3G03357' => 'aox', 'Aqoxy4G00785' => 'aox', 'Aqoxy5G02598' => 'aox', 'Aqoxy6G00132' => 'aox', 'Aqoxy7G01776' => 'aox', 'Aqoxy7G02316' => 'aox', 'Aqoxy7G03973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.12AFKW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B8730' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27IQR1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3F75VG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3RE0GA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41TCQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.527VTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FIR39' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5W8UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DA38EV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ63HS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H1I32C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HC27T5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4M8AP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7N3CZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9UVDZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LS1NQA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT1D4B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SKC4TM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCFV76' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF9Q1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQWD9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1ZM88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WE07RT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YCK7VH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJE6Q6' => 'arhy', 'AT1G28240' => 'ath', 'AT1G34550' => 'ath', 'AT1G53040' => 'ath', 'AT2G02910' => 'ath', 'AT4G09630' => 'ath', 'AT4G38500' => 'ath', 'AT5G42660' => 'ath', 'AT5G46220' => 'ath', 'ATR0152G026' => 'atr', 'ATR0564G343' => 'atr', 'ATR0706G151' => 'atr', 'ATR0733G207' => 'atr', 'ATR0751G234' => 'atr', 'ATR0807G048' => 'atr', 'ATR1091G084' => 'atr', 'Atru.chr10.1229' => 'acertr', 'Atru.chr10.1230' => 'acertr', 'Atru.chr10.1874' => 'acertr', 'Atru.chr11.1808' => 'acertr', 'Atru.chr13.1795' => 'acertr', 'Atru.chr13.570' => 'acertr', 'Atru.chr2.2608' => 'acertr', 'Atru.chr2.2609' => 'acertr', 'Atru.chr5.3428' => 'acertr', 'Atru.chr8.1171' => 'acertr', 'AUR62004651' => 'cqu', 'AUR62008675' => 'cqu', 'AUR62010014' => 'cqu', 'AUR62013004' => 'cqu', 'AUR62014825' => 'cqu', 'AUR62015015' => 'cqu', 'AUR62015151' => 'cqu', 'AUR62017020' => 'cqu', 'AUR62019422' => 'cqu', 'AUR62023570' => 'cqu', 'AUR62025571' => 'cqu', 'AUR62029098' => 'cqu', 'AUR62033863' => 'cqu', 'AUR62034296' => 'cqu', 'AUR62040075' => 'cqu', 'BcaB02g07334' => 'bca', 'BcaB02g10575' => 'bca', 'BcaB03g12119' => 'bca', 'BcaB03g12120' => 'bca', 'BcaB03g13945' => 'bca', 'BcaB04g17123' => 'bca', 'BcaB04g17867' => 'bca', 'BcaB04g19839' => 'bca', 'BcaB07g30317' => 'bca', 'BcaB07g32432' => 'bca', 'BcaB07g33362' => 'bca', 'BcaB08g36611' => 'bca', 'BcaC01g00028' => 'bca', 'BcaC01g01356' => 'bca', 'BcaC01g02034' => 'bca', 'BcaC01g06051' => 'bca', 'BcaC03g16839' => 'bca', 'BcaC03g17176' => 'bca', 'BcaC05g26829' => 'bca', 'BcaC06g31490' => 'bca', 'BcaC06g35344' => 'bca', 'BcaC06g36570' => 'bca', 'BcaC07g37537' => 'bca', 'BcaC08g43491' => 'bca', 'BcaC08g43773' => 'bca', 'BcaNung00234' => 'bca', 'BcaNung01982' => 'bca', 'BcaNung03707' => 'bca', 'BcaNung06454' => 'bca', 'BolC2t10762H' => 'bol', 'BolC2t11191H' => 'bol', 'BolC3t14322H' => 'bol', 'BolC3t19747H' => 'bol', 'BolC3t21425H' => 'bol', 'BolC4t27800H' => 'bol', 'BolC5t31423H' => 'bol', 'BolC6t35951H' => 'bol', 'BolC6t36282H' => 'bol', 'BolC7t40678H' => 'bol', 'BolC7t40679H' => 'bol', 'BolC7t42222H' => 'bol', 'BolC7t43492H' => 'bol', 'BolC7t46785H' => 'bol', 'BolC8t47853H' => 'bol', 'BolC9t56805H' => 'bol', 'BraA02t08000Z' => 'bra', 'BraA02t08341Z' => 'bra', 'BraA03t10936Z' => 'bra', 'BraA03t15657Z' => 'bra', 'BraA04t18100Z' => 'bra', 'BraA05t20523Z' => 'bra', 'BraA06t23353Z' => 'bra', 'BraA06t27473Z' => 'bra', 'BraA06t27769Z' => 'bra', 'BraA07t28928Z' => 'bra', 'BraA08t32236Z' => 'bra', 'BraA08t32841Z' => 'bra', 'BraA08t34524Z' => 'bra', 'BraA09t38742Z' => 'bra', 'BraA09t39295Z' => 'bra', 'C02p47180' => 'bna', 'C02p50990' => 'bna', 'C03p19360' => 'bna', 'C03p74950' => 'bna', 'C03p91000' => 'bna', 'C04p63260' => 'bna', 'C05p27050' => 'bna', 'C06p08750' => 'bna', 'C06p11490' => 'bna', 'C07p02820' => 'bna', 'C07p17180' => 'bna', 'C07p29440' => 'bna', 'C07p63730' => 'bna', 'C09p39260' => 'bna', 'CAN.G1164.34' => 'can', 'CAN.G1164.39' => 'can', 'CAN.G1530.3' => 'can', 'CAN.G162.61' => 'can', 'CAN.G176.6' => 'can', 'CAN.G289.49' => 'can', 'CAN.G370.21' => 'can', 'CAN.G370.22' => 'can', 'CAN.G371.117' => 'can', 'CAN.G58.37' => 'can', 'CAN.G588.98' => 'can', 'CANSAT21G2266' => 'cansat', 'CANSAT25G2799' => 'cansat', 'CANSAT35G0862' => 'cansat', 'CANSAT35G1704' => 'cansat', 'CANSAT35G1760' => 'cansat', 'CANSAT56G3971' => 'cansat', 'CANSAT56G4116' => 'cansat', 'CANSAT80G1259' => 'cansat', 'CARHR027730' => 'chi', 'CARHR033880' => 'chi', 'CARHR043270' => 'chi', 'CARHR145330' => 'chi', 'CARHR145340' => 'chi', 'CARHR175570' => 'chi', 'CARHR181570' => 'chi', 'CARHR258470' => 'chi', 'CARHR260490' => 'chi', 'CARHR294220' => 'chi', 'Carub.0001s2668' => 'cru', 'Carub.0001s3257' => 'cru', 'Carub.0001s4220' => 'cru', 'Carub.0005s0179' => 'cru', 'Carub.0006s2807' => 'cru', 'Carub.0007s0039' => 'cru', 'Carub.0008s0169' => 'cru', 'Carub.0008s0636' => 'cru', 'Ca_00338_v3' => 'car', 'Ca_00542_v3' => 'car', 'Ca_01844_v3' => 'car', 'Ca_10611_v3' => 'car', 'Ca_13326_v3' => 'car', 'Ca_17944_v3' => 'car', 'Ca_18546_v3' => 'car', 'Ca_24219_v3' => 'car', 'Ca_29972_v3' => 'car', 'CBR_g3681' => 'cbr', 'CBR_g40021' => 'cbr', 'Cc01_g08140' => 'ccan', 'Cc02_g13410' => 'ccan', 'Cc02_g37480' => 'ccan', 'Cc05_g12030' => 'ccan', 'Cc09_g03370' => 'ccan', 'Cc09_g10300' => 'ccan', 'Cc10_g03530' => 'ccan', 'Cc10_g11380' => 'ccan', 'CDE01G0176' => 'cde', 'CDE02G0675' => 'cde', 'CDE02G0942' => 'cde', 'CDE02G1153' => 'cde', 'CDE02G4177' => 'cde', 'CDE04G2117' => 'cde', 'CDE04G2736' => 'cde', 'CDE08G1161' => 'cde', 'CDE09G1238' => 'cde', 'Cfa000467' => 'cfa', 'Cfa000947' => 'cfa', 'Cfa004969' => 'cfa', 'Cfa005284' => 'cfa', 'Cfa008993' => 'cfa', 'Cfa018187' => 'cfa', 'Cfa018454' => 'cfa', 'Cfa020585' => 'cfa', 'Ciclev10000424m.g' => 'ccl', 'Ciclev10003605m.g' => 'ccl', 'Ciclev10007828m.g' => 'ccl', 'Ciclev10014620m.g' => 'ccl', 'Ciclev10015169m.g' => 'ccl', 'Ciclev10018291m.g' => 'ccl', 'Ciclev10028256m.g' => 'ccl', 'Ciclev10033822m.g' => 'ccl', 'CiPaw.05G060300' => 'cil', 'CiPaw.05G085000' => 'cil', 'CiPaw.06G083700' => 'cil', 'CiPaw.06G120300' => 'cil', 'CiPaw.09G060500' => 'cil', 'CiPaw.09G123800' => 'cil', 'CiPaw.11G169700' => 'cil', 'CiPaw.12G118300' => 'cil', 'CiPaw.15G071000' => 'cil', 'CiPaw.15G081900' => 'cil', 'ClCG01G024610' => 'cla', 'ClCG03G006070' => 'cla', 'ClCG05G019250' => 'cla', 'ClCG09G009500' => 'cla', 'ClCG11G008200' => 'cla', 'ClCG11G018080' => 'cla', 'COL.COLO4_17373' => 'col', 'COL.COLO4_22994' => 'col', 'COL.COLO4_26389' => 'col', 'COL.COLO4_27170' => 'col', 'COL.COLO4_31074' => 'col', 'COL.COLO4_31465' => 'col', 'COL.COLO4_36438' => 'col', 'COL.COLO4_36439' => 'col', 'Cpa.g.c38781' => 'cpa', 'Cpa.g.sc128.12' => 'cpa', 'Cpa.g.sc166.7' => 'cpa', 'Cpa.g.sc166.8' => 'cpa', 'Cpa.g.sc20.111' => 'cpa', 'Cpa.g.sc27.31' => 'cpa', 'Cpa.g.sc64.36' => 'cpa', 'Cpa.g.sc64.37' => 'cpa', 'Cpa.g.sc66.49' => 'cpa', 'Cpa.g.sc80.64' => 'cpa', 'CsaV3_1G012320' => 'csa', 'CsaV3_2G008480' => 'csa', 'CsaV3_2G033450' => 'csa', 'CsaV3_3G044830' => 'csa', 'CsaV3_4G033710' => 'csa', 'CsaV3_6G051730' => 'csa', 'CsaV3_7G025350' => 'csa', 'CSS0001067' => 'camsi', 'CSS0005996' => 'camsi', 'CSS0006590' => 'camsi', 'CSS0009673' => 'camsi', 'CSS0010201' => 'camsi', 'CSS0010549' => 'camsi', 'CSS0011364' => 'camsi', 'CSS0014473' => 'camsi', 'CSS0014961' => 'camsi', 'CSS0020191' => 'camsi', 'CSS0021165' => 'camsi', 'CSS0022306' => 'camsi', 'CSS0030591' => 'camsi', 'CSS0030696' => 'camsi', 'CSS0032653' => 'camsi', 'CSS0037487' => 'camsi', 'CSS0041102' => 'camsi', 'CSS0041261' => 'camsi', 'CSS0046246' => 'camsi', 'CSS0049256' => 'camsi', 'DCAR_004075' => 'dca', 'DCAR_011538' => 'dca', 'DCAR_019553' => 'dca', 'DCAR_020952' => 'dca', 'DCAR_021739' => 'dca', 'DCAR_027407' => 'dca', 'DCAR_027913' => 'dca', 'DCAR_028066' => 'dca', 'Dinv05899' => 'din', 'Dinv07563' => 'din', 'Dinv08010' => 'din', 'Dinv14125' => 'din', 'Dinv20172' => 'din', 'Dinv30743' => 'din', 'Dinv31229' => 'din', 'Dinv34162' => 'din', 'Dinv36028' => 'din', 'Dinv39368' => 'din', 'Dinv40565' => 'din', 'Dinv41706' => 'din', 'Duzib052G0089' => 'dzi', 'Duzib116G0641' => 'dzi', 'Duzib132G0069' => 'dzi', 'Duzib132G1219' => 'dzi', 'Duzib147G0278' => 'dzi', 'Duzib160G0480' => 'dzi', 'Duzib170G0661' => 'dzi', 'Duzib177G0591' => 'dzi', 'Duzib187G1353' => 'dzi', 'Duzib192G0858' => 'dzi', 'Duzib192G0883' => 'dzi', 'Duzib213G0506' => 'dzi', 'Duzib235G0289' => 'dzi', 'Duzib251G0422' => 'dzi', 'ECA232G3898' => 'eca', 'ECA233G5950' => 'eca', 'ECA234G1699' => 'eca', 'ECA234G2421' => 'eca', 'ECA236G0426' => 'eca', 'ECA236G4331' => 'eca', 'ECA248G2573' => 'eca', 'EL10Ac1g00077' => 'bvu', 'EL10Ac1g01746' => 'bvu', 'EL10Ac2g03464' => 'bvu', 'EL10Ac4g08176' => 'bvu', 'EL10Ac7g17521' => 'bvu', 'EL10Ac8g20386' => 'bvu', 'EL10Ac9g21343' => 'bvu', 'EL10Ac9g22688' => 'bvu', 'Eucgr.B03434' => 'egr', 'Eucgr.D00618' => 'egr', 'Eucgr.E02395' => 'egr', 'Eucgr.F01129' => 'egr', 'Eucgr.F02622' => 'egr', 'Eucgr.F04207' => 'egr', 'FAN01G0570' => 'fan', 'FAN03G3351' => 'fan', 'FAN06G3702' => 'fan', 'FAN07G2149' => 'fan', 'FAN10G3758' => 'fan', 'FAN11G1170' => 'fan', 'FAN11G2050' => 'fan', 'FAN11G2724' => 'fan', 'FAN12G1700' => 'fan', 'FAN12G2028' => 'fan', 'FAN15G1160' => 'fan', 'FAN15G3063' => 'fan', 'FAN16G2540' => 'fan', 'FAN16G3077' => 'fan', 'FAN16G3624' => 'fan', 'FAN17G0221' => 'fan', 'FAN20G2492' => 'fan', 'FAN20G2905' => 'fan', 'FAN21G0548' => 'fan', 'FAN21G1300' => 'fan', 'FAN22G0077' => 'fan', 'FAN22G1315' => 'fan', 'FAN24G1280' => 'fan', 'FAN24G1445' => 'fan', 'FAN24G3527' => 'fan', 'FAN25G0464' => 'fan', 'FAN25G2885' => 'fan', 'FAN25G3270' => 'fan', 'FAN27G1101' => 'fan', 'FAN27G2846' => 'fan', 'FAN27G3524' => 'fan', 'FvH4_2g11770' => 'fve', 'FvH4_2g15630' => 'fve', 'FvH4_3g05570' => 'fve', 'FvH4_3g09110' => 'fve', 'FvH4_3g19940' => 'fve', 'FvH4_4g04821' => 'fve', 'FvH4_4g31480' => 'fve', 'FvH4_7g01740' => 'fve', 'Glyma.05G130400' => 'gma', 'Glyma.05G156400' => 'gma', 'Glyma.07G197000' => 'gma', 'Glyma.08G085151' => 'gma', 'Glyma.08G114500' => 'gma', 'Glyma.08G300400' => 'gma', 'Glyma.10G215800' => 'gma', 'Glyma.12G224400' => 'gma', 'Glyma.13G179300' => 'gma', 'Glyma.13G218151' => 'gma', 'Glyma.13G238800' => 'gma', 'Glyma.13G276900' => 'gma', 'Glyma.14G078200' => 'gma', 'Glyma.15G074500' => 'gma', 'Glyma.15G094100' => 'gma', 'Glyma.17G247200' => 'gma', 'Glyma.18G120100' => 'gma', 'Glyma.20G176000' => 'gma', 'Gohir.A01G063600' => 'ghi', 'Gohir.A01G170301' => 'ghi', 'Gohir.A02G060500' => 'ghi', 'Gohir.A05G133850' => 'ghi', 'Gohir.A05G161400' => 'ghi', 'Gohir.A06G012900' => 'ghi', 'Gohir.A06G035901' => 'ghi', 'Gohir.A06G127100' => 'ghi', 'Gohir.A06G210500' => 'ghi', 'Gohir.A08G008650' => 'ghi', 'Gohir.A09G072700' => 'ghi', 'Gohir.A09G088301' => 'ghi', 'Gohir.A10G040600' => 'ghi', 'Gohir.A12G036300' => 'ghi', 'Gohir.A12G143350' => 'ghi', 'Gohir.A12G165500' => 'ghi', 'Gohir.A13G145700' => 'ghi', 'Gohir.D01G050000' => 'ghi', 'Gohir.D01G051366' => 'ghi', 'Gohir.D01G161350' => 'ghi', 'Gohir.D02G065900' => 'ghi', 'Gohir.D05G164200' => 'ghi', 'Gohir.D05G355500' => 'ghi', 'Gohir.D06G010400' => 'ghi', 'Gohir.D06G111250' => 'ghi', 'Gohir.D06G132000' => 'ghi', 'Gohir.D06G210500' => 'ghi', 'Gohir.D07G165675' => 'ghi', 'Gohir.D08G062240' => 'ghi', 'Gohir.D08G086101' => 'ghi', 'Gohir.D08G138060' => 'ghi', 'Gohir.D09G072300' => 'ghi', 'Gohir.D10G041400' => 'ghi', 'Gohir.D11G191020' => 'ghi', 'Gohir.D11G212066' => 'ghi', 'Gohir.D12G036300' => 'ghi', 'Gohir.D12G168600' => 'ghi', 'Gohir.D13G150600' => 'ghi', 'Gorai.001G057300' => 'gra', 'Gorai.002G069900' => 'gra', 'Gorai.002G200000' => 'gra', 'Gorai.003G067600' => 'gra', 'Gorai.005G074800' => 'gra', 'Gorai.006G087300' => 'gra', 'Gorai.008G037500' => 'gra', 'Gorai.008G181400' => 'gra', 'Gorai.009G169400' => 'gra', 'Gorai.009G387900' => 'gra', 'Gorai.010G013300' => 'gra', 'Gorai.010G153800' => 'gra', 'Gorai.010G255800' => 'gra', 'Gorai.011G043700' => 'gra', 'Gorai.011G198900' => 'gra', 'Gorai.013G168400' => 'gra', 'GSVIVG01005212001' => 'vvi', 'GSVIVG01006163001' => 'vvi', 'GSVIVG01009625001' => 'vvi', 'GSVIVG01014338001' => 'vvi', 'GSVIVG01020005001' => 'vvi', 'GSVIVG01021450001' => 'vvi', 'GSVIVG01023975001' => 'vvi', 'GSVIVG01034490001' => 'vvi', 'HanXRQChr04g0112071' => 'han', 'HanXRQChr05g0131151' => 'han', 'HanXRQChr09g0262371' => 'han', 'HanXRQChr09g0268401' => 'han', 'HanXRQChr10g0279241' => 'han', 'HanXRQChr10g0297961' => 'han', 'HanXRQChr11g0326231' => 'han', 'HanXRQChr11g0328471' => 'han', 'HanXRQChr16g0507941' => 'han', 'HanXRQChr17g0560211' => 'han', 'Haze_02108' => 'cav', 'Haze_02428' => 'cav', 'Haze_05593' => 'cav', 'Haze_06448' => 'cav', 'Haze_09427' => 'cav', 'Haze_12022' => 'cav', 'Haze_17612' => 'cav', 'Haze_17928' => 'cav', 'Hma1.2p1_0032F.1_g019250' => 'hma', 'Hma1.2p1_0163F.1_g072690' => 'hma', 'Hma1.2p1_0265F.1_g106710' => 'hma', 'Hma1.2p1_0286F.1_g113970' => 'hma', 'Hma1.2p1_0363F.1_g136640' => 'hma', 'Hma1.2p1_0584F.1_g183470' => 'hma', 'Hma1.2p1_0885F.1_g232570' => 'hma', 'HPP92_006022' => 'vpl', 'HPP92_007320' => 'vpl', 'HPP92_011521' => 'vpl', 'HPP92_019387' => 'vpl', 'HPP92_024038' => 'vpl', 'Hund05891' => 'sun', 'Hund06450' => 'sun', 'Hund12053' => 'sun', 'Hund16800' => 'sun', 'Hund21222' => 'sun', 'Hund22896' => 'sun', 'Hund23746' => 'sun', 'Hund27083' => 'sun', 'Lalb_Chr02g0141831' => 'lal', 'Lalb_Chr02g0141841' => 'lal', 'Lalb_Chr05g0220411' => 'lal', 'Lalb_Chr06g0162081' => 'lal', 'Lalb_Chr09g0327651' => 'lal', 'Lalb_Chr13g0295051' => 'lal', 'Lalb_Chr15g0086801' => 'lal', 'Lalb_Chr16g0383781' => 'lal', 'Lalb_Chr16g0383791' => 'lal', 'Lalb_Chr18g0055441' => 'lal', 'Lalb_Chr18g0059611' => 'lal', 'Lalb_Chr20g0109661' => 'lal', 'Lalb_Chr20g0109831' => 'lal', 'Lalb_Chr20g0121871' => 'lal', 'Lalb_Chr22g0355361' => 'lal', 'Lalb_Chr25g0286371' => 'lal', 'Lj1A1187G43' => 'lonja', 'Lj1A1205T50' => 'lonja', 'Lj1A800G33' => 'lonja', 'Lj1C1187T7' => 'lonja', 'Lj1C843T11' => 'lonja', 'Lj1g0010940' => 'lja', 'Lj2A288T69' => 'lonja', 'Lj3g0024276' => 'lja', 'Lj4A47T76' => 'lonja', 'Lj4g0005805' => 'lja', 'Lj4g0006097' => 'lja', 'Lj4g0008528' => 'lja', 'Lj4g0024907' => 'lja', 'Lj5g0012472' => 'lja', 'Lj5g0018648' => 'lja', 'Lj6C789G1' => 'lonja', 'Lj6g0004000' => 'lja', 'Lj7A292G67' => 'lonja', 'Lj7A292T64' => 'lonja', 'Lj9A400T58' => 'lonja', 'Lsat_1_v5_gn_1_126181' => 'lsa', 'Lsat_1_v5_gn_4_123041' => 'lsa', 'Lsat_1_v5_gn_4_133620' => 'lsa', 'Lsat_1_v5_gn_4_53221' => 'lsa', 'Lsat_1_v5_gn_4_71961' => 'lsa', 'Lsat_1_v5_gn_7_105241' => 'lsa', 'Lsat_1_v5_gn_7_21361' => 'lsa', 'Lsat_1_v5_gn_7_28860' => 'lsa', 'Lsat_1_v5_gn_7_31260' => 'lsa', 'Lsat_1_v5_gn_8_52801' => 'lsa', 'Manes.02G191400' => 'mes', 'Manes.03G110100' => 'mes', 'Manes.04G071100' => 'mes', 'Manes.05G100500' => 'mes', 'Manes.05G164700' => 'mes', 'Manes.15G087000' => 'mes', 'Manes.15G121500' => 'mes', 'Manes.16G028300' => 'mes', 'Manes.17G046100' => 'mes', 'Manes.17G069800' => 'mes', 'Manes.18G100500' => 'mes', 'Mapoly0002s0109' => 'mpo', 'Mapoly0024s0007' => 'mpo', 'Mapoly0089s0032' => 'mpo', 'MBI04_g42241_MAGBIO' => 'mbi', 'MBI05_g11988_MAGBIO' => 'mbi', 'MBI05_g35452_MAGBIO' => 'mbi', 'MBI07_g30179_MAGBIO' => 'mbi', 'MBI07_g35859_MAGBIO' => 'mbi', 'MBI07_g35860_MAGBIO' => 'mbi', 'MBI07_g37166_MAGBIO' => 'mbi', 'MBI08_g18172_MAGBIO' => 'mbi', 'MBI09_g08441_MAGBIO' => 'mbi', 'MBI13_g01676_MAGBIO' => 'mbi', 'MBI14_g42955_MAGBIO' => 'mbi', 'MBI16_g13161_MAGBIO' => 'mbi', 'MBI17_g27204_MAGBIO' => 'mbi', 'MBI19_g21595_MAGBIO' => 'mbi', 'MD00G1148400' => 'mdo', 'MD02G1301200' => 'mdo', 'MD03G1227800' => 'mdo', 'MD05G1041100' => 'mdo', 'MD05G1124800' => 'mdo', 'MD05G1284000' => 'mdo', 'MD05G1338800' => 'mdo', 'MD05G1338900' => 'mdo', 'MD07G1022800' => 'mdo', 'MD10G1047500' => 'mdo', 'MD10G1127500' => 'mdo', 'MD10G1262300' => 'mdo', 'MD10G1293800' => 'mdo', 'MD16G1074300' => 'mdo', 'Medtr1g021670' => 'mtr', 'Medtr1g096320' => 'mtr', 'Medtr2g013690' => 'mtr', 'Medtr2g019450' => 'mtr', 'Medtr2g085170' => 'mtr', 'Medtr4g088785' => 'mtr', 'Medtr8g055930' => 'mtr', 'Medtr8g085850' => 'mtr', 'MELO3C002605.2' => 'cme', 'MELO3C003891.2' => 'cme', 'MELO3C004012.2' => 'cme', 'MELO3C007134.2' => 'cme', 'MELO3C008118.2' => 'cme', 'MELO3C016700.2' => 'cme', 'MELO3C024127.2' => 'cme', 'MELO3C033361.2' => 'cme', 'MELO3C033362.2' => 'cme', 'Migut.C00430' => 'egut', 'Migut.C01246' => 'egut', 'Migut.E00101' => 'egut', 'Migut.H01486' => 'egut', 'Migut.H01939' => 'egut', 'Migut.K00360' => 'egut', 'Migut.M00910' => 'egut', 'Migut.M01139' => 'egut', 'Migut.N02677' => 'egut', 'MSTRG.13252' => 'ama', 'MSTRG.14701' => 'ama', 'MSTRG.1521' => 'ama', 'MSTRG.15884' => 'ama', 'MSTRG.16242' => 'ama', 'MSTRG.22285' => 'ama', 'MSTRG.22444' => 'ama', 'MSTRG.2349' => 'ama', 'MSTRG.26308' => 'ama', 'MSTRG.28296' => 'ama', 'MSTRG.9895' => 'ama', 'Nitab4.5_0000110g0060' => 'nta', 'Nitab4.5_0000420g0130' => 'nta', 'Nitab4.5_0000422g0030' => 'nta', 'Nitab4.5_0000560g0180' => 'nta', 'Nitab4.5_0000703g0100' => 'nta', 'Nitab4.5_0000786g0200' => 'nta', 'Nitab4.5_0001336g0020' => 'nta', 'Nitab4.5_0001796g0030' => 'nta', 'Nitab4.5_0003348g0060' => 'nta', 'Nitab4.5_0003698g0040' => 'nta', 'Nitab4.5_0003942g0090' => 'nta', 'Nitab4.5_0004775g0070' => 'nta', 'Nitab4.5_0004864g0030' => 'nta', 'Nitab4.5_0005615g0020' => 'nta', 'Nitab4.5_0009288g0030' => 'nta', 'Nitab4.5_0009341g0010' => 'nta', 'Nitab4.5_0009535g0010' => 'nta', 'Nn1g03995' => 'nnu', 'Nn1g04100' => 'nnu', 'Nn1g06530' => 'nnu', 'Nn3g16404' => 'nnu', 'Nn3g17212' => 'nnu', 'Nn3g20776' => 'nnu', 'Nn3g21923' => 'nnu', 'Nn5g27737' => 'nnu', 'Nn5g29461' => 'nnu', 'Nn7g38355' => 'nnu', 'Nn8g39873' => 'nnu', 'Oeu000548.2' => 'oeu', 'Oeu004672.1' => 'oeu', 'Oeu015605.2' => 'oeu', 'Oeu016092.1' => 'oeu', 'Oeu017879.3' => 'oeu', 'Oeu024910.1' => 'oeu', 'Oeu028965.1' => 'oeu', 'Oeu031269.1' => 'oeu', 'Oeu031270.1' => 'oeu', 'Oeu032535.1' => 'oeu', 'Oeu034151.1' => 'oeu', 'Oeu034152.1' => 'oeu', 'Oeu034588.2' => 'oeu', 'Oeu050846.1' => 'oeu', 'Oeu050849.2' => 'oeu', 'Oeu051063.2' => 'oeu', 'Oeu052368.1' => 'oeu', 'Oeu052370.1' => 'oeu', 'Os01g0210400' => 'osa', 'Os01g0304300' => 'osa', 'Os01g0749100' => 'osa', 'Os02g0745800' => 'osa', 'Os03g0769050' => 'osa', 'Os05g0531500' => 'osa', 'Os06g0724300' => 'osa', 'Os11g0198100' => 'osa', 'Peaxi162Scf00069g01425' => 'pax', 'Peaxi162Scf00280g00811' => 'pax', 'Peaxi162Scf00310g00615' => 'pax', 'Peaxi162Scf00362g00542' => 'pax', 'Peaxi162Scf00461g00310' => 'pax', 'Peaxi162Scf00530g00118' => 'pax', 'Peaxi162Scf00541g00057' => 'pax', 'Peaxi162Scf00661g00017' => 'pax', 'Peaxi162Scf00926g00027' => 'pax', 'Peaxi162Scf01064g00263' => 'pax', 'Peaxi162Scf01211g00135' => 'pax', 'PGR004G2336' => 'pgr', 'PGR042G0327' => 'pgr', 'PGR042G1957' => 'pgr', 'PGR042G2003' => 'pgr', 'PGR042G3929' => 'pgr', 'PGR083G1137' => 'pgr', 'PGR083G1364' => 'pgr', 'PGSC0003DMG400003381' => 'stu', 'PGSC0003DMG400003417' => 'stu', 'PGSC0003DMG400008981' => 'stu', 'PGSC0003DMG400012417' => 'stu', 'PGSC0003DMG400012823' => 'stu', 'PGSC0003DMG400016885' => 'stu', 'PGSC0003DMG400022812' => 'stu', 'PGSC0003DMG400029726' => 'stu', 'PGSC0003DMG401009243' => 'stu', 'PGSC0003DMG401031505' => 'stu', 'PGSC0003DMG402031505' => 'stu', 'Phvul.001G017600' => 'pvu', 'Phvul.002G193500' => 'pvu', 'Phvul.002G228900' => 'pvu', 'Phvul.002G236800' => 'pvu', 'Phvul.003G049500' => 'pvu', 'Phvul.005G072000' => 'pvu', 'Phvul.006G164800' => 'pvu', 'Phvul.006G185100' => 'pvu', 'Phvul.007G090000' => 'pvu', 'Potri.001G399800' => 'ptr', 'Potri.002G149900' => 'ptr', 'Potri.004G044100' => 'ptr', 'Potri.004G177600' => 'ptr', 'Potri.009G138000' => 'ptr', 'Potri.010G094000' => 'ptr', 'Potri.011G053000' => 'ptr', 'Potri.011G119300' => 'ptr', 'Potri.013G113700' => 'ptr', 'Potri.018G107800' => 'ptr', 'Potri.019G084100' => 'ptr', 'Pp3c14_23720' => 'ppa', 'Pp3c16_6340' => 'ppa', 'Pp3c23_13420' => 'ppa', 'Pp3c24_2740' => 'ppa', 'Pp3c25_860' => 'ppa', 'Pp3c8_21750' => 'ppa', 'Prupe.1G273000' => 'ppe', 'Prupe.1G273700' => 'ppe', 'Prupe.1G274100' => 'ppe', 'Prupe.2G023300' => 'ppe', 'Prupe.4G048000' => 'ppe', 'Prupe.4G080400' => 'ppe', 'Prupe.4G181200' => 'ppe', 'Prupe.8G056900' => 'ppe', 'Prupe.8G168700' => 'ppe', 'Psat1g189080' => 'psa', 'Psat1g204760' => 'psa', 'Psat4g175560' => 'psa', 'Psat4g177720' => 'psa', 'Psat5g244240' => 'psa', 'Psat6g010720' => 'psa', 'Psat6g187200' => 'psa', 'Psat7g072040' => 'psa', 'PSO017G3501' => 'pso', 'PSO063G2148' => 'pso', 'PSO063G5608' => 'pso', 'PSO210G6392' => 'pso', 'PSO541G2319' => 'pso', 'PSO541G2836' => 'pso', 'PSO541G4012' => 'pso', 'PSO541G6253' => 'pso', 'PSO675G0580' => 'pso', 'PSO675G0856' => 'pso', 'PSO675G5635' => 'pso', 'PSO675G9157' => 'pso', 'PSO832G1660' => 'pso', 'PSO832G1969' => 'pso', 'QL02p007186' => 'qlo', 'QL02p033904' => 'qlo', 'QL03p064391' => 'qlo', 'QL05p040593' => 'qlo', 'QL05p058242' => 'qlo', 'QL08p021825' => 'qlo', 'QL11p004981' => 'qlo', 'RcHm_v2.0_Chr1g0318301' => 'rch', 'RcHm_v2.0_Chr4g0418501' => 'rch', 'RcHm_v2.0_Chr4g0439971' => 'rch', 'RcHm_v2.0_Chr5g0008541' => 'rch', 'RcHm_v2.0_Chr5g0014101' => 'rch', 'RcHm_v2.0_Chr5g0014131' => 'rch', 'RcHm_v2.0_Chr5g0033621' => 'rch', 'RcHm_v2.0_Chr6g0272041' => 'rch', 'RcHm_v2.0_Chr6g0278831' => 'rch', 'Rhsim02G0130400' => 'rsi', 'Rhsim02G0171100' => 'rsi', 'Rhsim05G0053000' => 'rsi', 'Rhsim05G0053100' => 'rsi', 'Rhsim06G0096500' => 'rsi', 'Rhsim06G0096600' => 'rsi', 'Rhsim06G0199100' => 'rsi', 'Rhsim12G0062300' => 'rsi', 'Rhsim12G0062800' => 'rsi', 'Sabra02G0118600' => 'sbr', 'Sabra04G0027300' => 'sbr', 'Sabra04G0119500' => 'sbr', 'Sabra08G0112500' => 'sbr', 'Sabra11G0036800' => 'sbr', 'Sabra11G0103800' => 'sbr', 'Sabra13G0096300' => 'sbr', 'Sabra16G0262300' => 'sbr', 'Sabra18G0091700' => 'sbr', 'Sabra19G0095400' => 'sbr', 'SalBow6G3080' => 'sbo', 'SalBow7G1157' => 'sbo', 'SalBow7G2123' => 'sbo', 'SalBow7G2285' => 'sbo', 'SalBow7G3537' => 'sbo', 'SalBow8G2947' => 'sbo', 'SalBow8G4463' => 'sbo', 'SalBow8G5466' => 'sbo', 'Sc01g0001750' => 'sci', 'Sc02g0006640' => 'sci', 'Sc02g0006670' => 'sci', 'Sc04g0008220' => 'sci', 'Sc05g0006190' => 'sci', 'Sc08g0002760' => 'sci', 'Sc17g0006170' => 'sci', 'Sc22g0002050' => 'sci', 'Sc23g0001190' => 'sci', 'Sc24g0000980' => 'sci', 'Sed0006245' => 'sed', 'Sed0007543' => 'sed', 'Sed0009411' => 'sed', 'Sed0010765' => 'sed', 'Sed0012944' => 'sed', 'Sed0014682' => 'sed', 'Sed0016174' => 'sed', 'Sed0016796' => 'sed', 'Sed0020317' => 'sed', 'Sed0021467' => 'sed', 'SEGI_01316' => 'sgi', 'SEGI_03374' => 'sgi', 'SEGI_16265' => 'sgi', 'SEGI_18569' => 'sgi', 'SEGI_20351' => 'sgi', 'SEGI_26395' => 'sgi', 'SEGI_29469' => 'sgi', 'SEGI_34771' => 'sgi', 'SEGI_36769' => 'sgi', 'SEGI_37139' => 'sgi', 'SGA_v2.0_scaffold100G29687' => 'sas', 'SGA_v2.0_scaffold118G32472' => 'sas', 'SGA_v2.0_scaffold14G07051' => 'sas', 'SGA_v2.0_scaffold183G39845' => 'sas', 'SGA_v2.0_scaffold1G00174' => 'sas', 'SGA_v2.0_scaffold22G09714' => 'sas', 'SGA_v2.0_scaffold333G48992' => 'sas', 'SGA_v2.0_scaffold46G17491' => 'sas', 'SGA_v2.0_scaffold49G18294' => 'sas', 'SGA_v2.0_scaffold63G21658' => 'sas', 'SHI01741' => 'shi', 'SHI05771' => 'shi', 'SHI18077' => 'shi', 'SHI20525' => 'shi', 'SHI20527' => 'shi', 'SHI20528' => 'shi', 'SMO172G0185' => 'smo', 'SMO198G0020' => 'smo', 'SMO351G0006' => 'smo', 'SMO356G0118' => 'smo', 'SMO358G0296' => 'smo', 'SMO367G0079' => 'smo', 'SMO367G1277' => 'smo', 'Solyc01g014220.3' => 'sly', 'Solyc01g111770.2' => 'sly', 'Solyc02g078180.3' => 'sly', 'Solyc03g006430.3' => 'sly', 'Solyc03g006456.1' => 'sly', 'Solyc03g079860.2' => 'sly', 'Solyc04g079770.3' => 'sly', 'Solyc05g007430.4' => 'sly', 'Solyc07g063150.3' => 'sly', 'Solyc08g016620.3' => 'sly', 'Solyc09g057590.3' => 'sly', 'Solyc09g057600.1' => 'sly', 'Solyc10g009050.3' => 'sly', 'Solyc11g017420.2' => 'sly', 'Sopen01g053810' => 'spe', 'Sopen02g023040' => 'spe', 'Sopen03g002440' => 'spe', 'Sopen04g033350' => 'spe', 'Sopen05g003310' => 'spe', 'Sopen07g004050' => 'spe', 'Sopen07g031340' => 'spe', 'Sopen08g006990' => 'spe', 'Sopen10g004830' => 'spe', 'Sopen11g009370' => 'spe', 'Sp1g24450' => 'spa', 'Sp1g29670' => 'spa', 'Sp1g39600' => 'spa', 'Sp2g11080' => 'spa', 'Sp2g13970' => 'spa', 'Sp4g16130' => 'spa', 'Sp6g13080' => 'spa', 'Sp7g37270' => 'spa', 'TAR371G0065' => 'tar', 'TAR376G0340' => 'tar', 'TAR376G0435' => 'tar', 'TAR381G0002' => 'tar', 'TAR381G1236' => 'tar', 'TAR624G0055' => 'tar', 'TAR624G0324' => 'tar', 'TAR624G0696' => 'tar', 'TAR624G0906' => 'tar', 'TAR625G0107' => 'tar', 'TAR626G0015' => 'tar', 'TAR626G1356' => 'tar', 'TAR627G0888' => 'tar', 'TAR628G0399' => 'tar', 'TAR628G1327' => 'tar', 'TAR629G2831' => 'tar', 'TAR629G2874' => 'tar', 'TAR633G1432' => 'tar', 'TAR633G2771' => 'tar', 'THA.LOC104803394' => 'tha', 'THA.LOC104805153' => 'tha', 'THA.LOC104806784' => 'tha', 'THA.LOC104810473' => 'tha', 'THA.LOC104813100' => 'tha', 'THA.LOC104814215' => 'tha', 'THA.LOC104815554' => 'tha', 'THA.LOC104820544' => 'tha', 'THA.LOC104824754' => 'tha', 'THA.LOC104827717' => 'tha', 'Thecc.02G031400' => 'tca', 'Thecc.02G055900' => 'tca', 'Thecc.02G350800' => 'tca', 'Thecc.06G150900' => 'tca', 'Thecc.06G186600' => 'tca', 'Thecc.07G089600' => 'tca', 'Thecc.08G020400' => 'tca', 'Thecc.08G182100' => 'tca', 'Thhalv10000873m.g' => 'esa', 'Thhalv10004185m.g' => 'esa', 'Thhalv10006981m.g' => 'esa', 'Thhalv10007204m.g' => 'esa', 'Thhalv10011374m.g' => 'esa', 'Thhalv10013482m.g' => 'esa', 'Thhalv10017801m.g' => 'esa', 'Thhalv10024983m.g' => 'esa', 'TPR.G12072' => 'tpr', 'TPR.G15769' => 'tpr', 'TPR.G16504' => 'tpr', 'TPR.G16506' => 'tpr', 'TPR.G24345' => 'tpr', 'TPR.G26666' => 'tpr', 'TPR.G27320' => 'tpr', 'TPR.G31819' => 'tpr', 'TPR.G38879' => 'tpr', 'TPR.G39015' => 'tpr', 'TPR.G8819' => 'tpr', 'TWI09G0924' => 'twi', 'TWI12G0811' => 'twi', 'TWI12G1294' => 'twi', 'TWI31G0150' => 'twi', 'TWI36G1262' => 'twi', 'TWI38G1287' => 'twi', 'TWI38G1633' => 'twi', 'TWI38G1982' => 'twi', 'TWI39G0116' => 'twi', 'TWI60G1011' => 'twi', 'TWI63G0171' => 'twi', 'TWI73G0839' => 'twi', 'TWI79G1511' => 'twi', 'unitig_0.g915' => 'ugi', 'unitig_0.g916' => 'ugi', 'unitig_21.g20219' => 'ugi', 'unitig_21.g20416' => 'ugi', 'unitig_578.g16132' => 'ugi', 'unitig_578.g16718' => 'ugi', 'unitig_62.g23481' => 'ugi', 'unitig_744.g24535' => 'ugi', 'unitig_749.g13525' => 'ugi', 'vmacro01248' => 'vma', 'vmacro02290' => 'vma', 'vmacro10946' => 'vma', 'vmacro11865' => 'vma', 'vmacro12493' => 'vma', 'vmacro17322' => 'vma', 'vmacro21599' => 'vma', 'vmacro23041' => 'vma', 'VMungo0251G0004' => 'vmu', 'VMungo0251G2639' => 'vmu', 'VMungo0251G2967' => 'vmu', 'VMungo0540G0864' => 'vmu', 'VMungo0540G1569' => 'vmu', 'VMungo0647G0317' => 'vmu', 'VMungo0720G1373' => 'vmu', 'VMungo0720G1508' => 'vmu', 'VMungo1080G0485' => 'vmu', 'VMungo1215G3177' => 'vmu', 'Zm00001eb112600' => 'zma', 'Zm00001eb120220' => 'zma', 'Zm00001eb153240' => 'zma', 'Zm00001eb168880' => 'zma', 'Zm00001eb213920' => 'zma', 'Zm00001eb228280' => 'zma', 'Zm00001eb254580' => 'zma', 'Zm00001eb272180' => 'zma', 'Zm00001eb293190' => 'zma', 'Zm00001eb322930' => 'zma', 'Zm00001eb353360' => 'zma', 'Zm00001eb353390' => 'zma', 'Zm00001eb353430' => 'zma', 'Zm00001eb353440' => 'zma', 'Zm00001eb353780' => 'zma' ), 'gf_id' => 'HOM05D000499', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000499' ), 'data_identifier' => 'HOM05D000499', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000499', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1066', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p29780' => 'bna', 'A02p33180' => 'bna', 'A03p16470' => 'bna', 'A03p66010' => 'bna', 'A04p25970' => 'bna', 'A06p01270' => 'bna', 'A06p46080' => 'bna', 'A07p11400' => 'bna', 'A08p01840' => 'bna', 'A08p08230' => 'bna', 'A08p25740' => 'bna', 'A09p32070' => 'bna', 'A09p37830' => 'bna', 'A09p42840' => 'bna', 'A09p42850' => 'bna', 'Aa31LG10G2060' => 'aar', 'Aa31LG2G7410' => 'aar', 'Aa31LG6G10200' => 'aar', 'Aa31LG6G16680' => 'aar', 'Aa31LG6G8470' => 'aar', 'Aa31LG9G12730' => 'aar', 'Aa31LG9G13680' => 'aar', 'Aa31LG9G14920' => 'aar', 'Aa31LG9G6650' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4977' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5467' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3254' => 'aag', 'Actinidia02578' => 'ach', 'Actinidia07693' => 'ach', 'Actinidia08413' => 'ach', 'Actinidia08414' => 'ach', 'Actinidia15289' => 'ach', 'Actinidia19871' => 'ach', 'Actinidia21475' => 'ach', 'Actinidia22576' => 'ach', 'Actinidia28327' => 'ach', 'Actinidia32491' => 'ach', 'Actinidia39463' => 'ach', 'Actinidia39571' => 'ach', 'Ah.01g013750' => 'amhyb', 'Ah.01g023210' => 'amhyb', 'Ah.04g164850' => 'amhyb', 'Ah.05g178060' => 'amhyb', 'Ah.07g204270' => 'amhyb', 'Ah.07g208480' => 'amhyb', 'Ah.09g237410' => 'amhyb', 'Ah.14g089460' => 'amhyb', 'AL1G41790' => 'aly', 'AL1G49050' => 'aly', 'AL1G53810' => 'aly', 'AL1G61400' => 'aly', 'AL4G18580' => 'aly', 'AL5G12510' => 'aly', 'AL5G12540' => 'aly', 'AL6G43230' => 'aly', 'AL7G10370' => 'aly', 'AL7G19250' => 'aly', 'AL8G12240' => 'aly', 'AL8G18540' => 'aly', 'Aqoxy1G02409' => 'aox', 'Aqoxy2G03993' => 'aox', 'Aqoxy3G03357' => 'aox', 'Aqoxy4G00785' => 'aox', 'Aqoxy5G02598' => 'aox', 'Aqoxy6G00132' => 'aox', 'Aqoxy7G01776' => 'aox', 'Aqoxy7G02316' => 'aox', 'Aqoxy7G03973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.12AFKW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B8730' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27IQR1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3F75VG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3RE0GA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41TCQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.527VTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FIR39' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5W8UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DA38EV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ63HS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H1I32C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HC27T5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4M8AP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7N3CZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9UVDZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LS1NQA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT1D4B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SKC4TM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCFV76' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF9Q1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQWD9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1ZM88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WE07RT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YCK7VH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJE6Q6' => 'arhy', 'AT1G28240' => 'ath', 'AT1G34550' => 'ath', 'AT1G53040' => 'ath', 'AT2G02910' => 'ath', 'AT4G09630' => 'ath', 'AT4G38500' => 'ath', 'AT5G42660' => 'ath', 'AT5G46220' => 'ath', 'ATR0152G026' => 'atr', 'ATR0564G343' => 'atr', 'ATR0706G151' => 'atr', 'ATR0733G207' => 'atr', 'ATR0751G234' => 'atr', 'ATR0807G048' => 'atr', 'ATR1091G084' => 'atr', 'Atru.chr10.1229' => 'acertr', 'Atru.chr10.1230' => 'acertr', 'Atru.chr10.1874' => 'acertr', 'Atru.chr11.1808' => 'acertr', 'Atru.chr13.1795' => 'acertr', 'Atru.chr13.570' => 'acertr', 'Atru.chr2.2608' => 'acertr', 'Atru.chr2.2609' => 'acertr', 'Atru.chr5.3428' => 'acertr', 'Atru.chr8.1171' => 'acertr', 'AUR62004651' => 'cqu', 'AUR62008675' => 'cqu', 'AUR62010014' => 'cqu', 'AUR62013004' => 'cqu', 'AUR62014825' => 'cqu', 'AUR62015015' => 'cqu', 'AUR62015151' => 'cqu', 'AUR62017020' => 'cqu', 'AUR62019422' => 'cqu', 'AUR62023570' => 'cqu', 'AUR62025571' => 'cqu', 'AUR62029098' => 'cqu', 'AUR62033863' => 'cqu', 'AUR62034296' => 'cqu', 'AUR62040075' => 'cqu', 'BcaB02g07334' => 'bca', 'BcaB02g10575' => 'bca', 'BcaB03g12119' => 'bca', 'BcaB03g12120' => 'bca', 'BcaB03g13945' => 'bca', 'BcaB04g17123' => 'bca', 'BcaB04g17867' => 'bca', 'BcaB04g19839' => 'bca', 'BcaB07g30317' => 'bca', 'BcaB07g32432' => 'bca', 'BcaB07g33362' => 'bca', 'BcaB08g36611' => 'bca', 'BcaC01g00028' => 'bca', 'BcaC01g01356' => 'bca', 'BcaC01g02034' => 'bca', 'BcaC01g06051' => 'bca', 'BcaC03g16839' => 'bca', 'BcaC03g17176' => 'bca', 'BcaC05g26829' => 'bca', 'BcaC06g31490' => 'bca', 'BcaC06g35344' => 'bca', 'BcaC06g36570' => 'bca', 'BcaC07g37537' => 'bca', 'BcaC08g43491' => 'bca', 'BcaC08g43773' => 'bca', 'BcaNung00234' => 'bca', 'BcaNung01982' => 'bca', 'BcaNung03707' => 'bca', 'BcaNung06454' => 'bca', 'BolC2t10762H' => 'bol', 'BolC2t11191H' => 'bol', 'BolC3t14322H' => 'bol', 'BolC3t19747H' => 'bol', 'BolC3t21425H' => 'bol', 'BolC4t27800H' => 'bol', 'BolC5t31423H' => 'bol', 'BolC6t35951H' => 'bol', 'BolC6t36282H' => 'bol', 'BolC7t40678H' => 'bol', 'BolC7t40679H' => 'bol', 'BolC7t42222H' => 'bol', 'BolC7t43492H' => 'bol', 'BolC7t46785H' => 'bol', 'BolC8t47853H' => 'bol', 'BolC9t56805H' => 'bol', 'BraA02t08000Z' => 'bra', 'BraA02t08341Z' => 'bra', 'BraA03t10936Z' => 'bra', 'BraA03t15657Z' => 'bra', 'BraA04t18100Z' => 'bra', 'BraA05t20523Z' => 'bra', 'BraA06t23353Z' => 'bra', 'BraA06t27473Z' => 'bra', 'BraA06t27769Z' => 'bra', 'BraA07t28928Z' => 'bra', 'BraA08t32236Z' => 'bra', 'BraA08t32841Z' => 'bra', 'BraA08t34524Z' => 'bra', 'BraA09t38742Z' => 'bra', 'BraA09t39295Z' => 'bra', 'C02p47180' => 'bna', 'C02p50990' => 'bna', 'C03p19360' => 'bna', 'C03p74950' => 'bna', 'C03p91000' => 'bna', 'C04p63260' => 'bna', 'C05p27050' => 'bna', 'C06p08750' => 'bna', 'C06p11490' => 'bna', 'C07p02820' => 'bna', 'C07p17180' => 'bna', 'C07p29440' => 'bna', 'C07p63730' => 'bna', 'C09p39260' => 'bna', 'CAN.G1164.34' => 'can', 'CAN.G1164.39' => 'can', 'CAN.G1530.3' => 'can', 'CAN.G162.61' => 'can', 'CAN.G176.6' => 'can', 'CAN.G289.49' => 'can', 'CAN.G370.21' => 'can', 'CAN.G370.22' => 'can', 'CAN.G371.117' => 'can', 'CAN.G58.37' => 'can', 'CAN.G588.98' => 'can', 'CANSAT21G2266' => 'cansat', 'CANSAT25G2799' => 'cansat', 'CANSAT35G0862' => 'cansat', 'CANSAT35G1704' => 'cansat', 'CANSAT35G1760' => 'cansat', 'CANSAT56G3971' => 'cansat', 'CANSAT56G4116' => 'cansat', 'CANSAT80G1259' => 'cansat', 'CARHR027730' => 'chi', 'CARHR033880' => 'chi', 'CARHR043270' => 'chi', 'CARHR145330' => 'chi', 'CARHR145340' => 'chi', 'CARHR175570' => 'chi', 'CARHR181570' => 'chi', 'CARHR258470' => 'chi', 'CARHR260490' => 'chi', 'CARHR294220' => 'chi', 'Carub.0001s2668' => 'cru', 'Carub.0001s3257' => 'cru', 'Carub.0001s4220' => 'cru', 'Carub.0005s0179' => 'cru', 'Carub.0006s2807' => 'cru', 'Carub.0007s0039' => 'cru', 'Carub.0008s0169' => 'cru', 'Carub.0008s0636' => 'cru', 'Ca_00338_v3' => 'car', 'Ca_00542_v3' => 'car', 'Ca_01844_v3' => 'car', 'Ca_10611_v3' => 'car', 'Ca_13326_v3' => 'car', 'Ca_17944_v3' => 'car', 'Ca_18546_v3' => 'car', 'Ca_24219_v3' => 'car', 'Ca_29972_v3' => 'car', 'CBR_g3681' => 'cbr', 'CBR_g40021' => 'cbr', 'Cc01_g08140' => 'ccan', 'Cc02_g13410' => 'ccan', 'Cc02_g37480' => 'ccan', 'Cc05_g12030' => 'ccan', 'Cc09_g03370' => 'ccan', 'Cc09_g10300' => 'ccan', 'Cc10_g03530' => 'ccan', 'Cc10_g11380' => 'ccan', 'CDE01G0176' => 'cde', 'CDE02G0675' => 'cde', 'CDE02G0942' => 'cde', 'CDE02G1153' => 'cde', 'CDE02G4177' => 'cde', 'CDE04G2117' => 'cde', 'CDE04G2736' => 'cde', 'CDE08G1161' => 'cde', 'CDE09G1238' => 'cde', 'Cfa000467' => 'cfa', 'Cfa000947' => 'cfa', 'Cfa004969' => 'cfa', 'Cfa005284' => 'cfa', 'Cfa008993' => 'cfa', 'Cfa018187' => 'cfa', 'Cfa018454' => 'cfa', 'Cfa020585' => 'cfa', 'Ciclev10000424m.g' => 'ccl', 'Ciclev10003605m.g' => 'ccl', 'Ciclev10007828m.g' => 'ccl', 'Ciclev10014620m.g' => 'ccl', 'Ciclev10015169m.g' => 'ccl', 'Ciclev10018291m.g' => 'ccl', 'Ciclev10028256m.g' => 'ccl', 'Ciclev10033822m.g' => 'ccl', 'CiPaw.05G060300' => 'cil', 'CiPaw.05G085000' => 'cil', 'CiPaw.06G083700' => 'cil', 'CiPaw.06G120300' => 'cil', 'CiPaw.09G060500' => 'cil', 'CiPaw.09G123800' => 'cil', 'CiPaw.11G169700' => 'cil', 'CiPaw.12G118300' => 'cil', 'CiPaw.15G071000' => 'cil', 'CiPaw.15G081900' => 'cil', 'ClCG01G024610' => 'cla', 'ClCG03G006070' => 'cla', 'ClCG05G019250' => 'cla', 'ClCG09G009500' => 'cla', 'ClCG11G008200' => 'cla', 'ClCG11G018080' => 'cla', 'COL.COLO4_17373' => 'col', 'COL.COLO4_22994' => 'col', 'COL.COLO4_26389' => 'col', 'COL.COLO4_27170' => 'col', 'COL.COLO4_31074' => 'col', 'COL.COLO4_31465' => 'col', 'COL.COLO4_36438' => 'col', 'COL.COLO4_36439' => 'col', 'Cpa.g.c38781' => 'cpa', 'Cpa.g.sc128.12' => 'cpa', 'Cpa.g.sc166.7' => 'cpa', 'Cpa.g.sc166.8' => 'cpa', 'Cpa.g.sc20.111' => 'cpa', 'Cpa.g.sc27.31' => 'cpa', 'Cpa.g.sc64.36' => 'cpa', 'Cpa.g.sc64.37' => 'cpa', 'Cpa.g.sc66.49' => 'cpa', 'Cpa.g.sc80.64' => 'cpa', 'CsaV3_1G012320' => 'csa', 'CsaV3_2G008480' => 'csa', 'CsaV3_2G033450' => 'csa', 'CsaV3_3G044830' => 'csa', 'CsaV3_4G033710' => 'csa', 'CsaV3_6G051730' => 'csa', 'CsaV3_7G025350' => 'csa', 'CSS0001067' => 'camsi', 'CSS0005996' => 'camsi', 'CSS0006590' => 'camsi', 'CSS0009673' => 'camsi', 'CSS0010201' => 'camsi', 'CSS0010549' => 'camsi', 'CSS0011364' => 'camsi', 'CSS0014473' => 'camsi', 'CSS0014961' => 'camsi', 'CSS0020191' => 'camsi', 'CSS0021165' => 'camsi', 'CSS0022306' => 'camsi', 'CSS0030591' => 'camsi', 'CSS0030696' => 'camsi', 'CSS0032653' => 'camsi', 'CSS0037487' => 'camsi', 'CSS0041102' => 'camsi', 'CSS0041261' => 'camsi', 'CSS0046246' => 'camsi', 'CSS0049256' => 'camsi', 'DCAR_004075' => 'dca', 'DCAR_011538' => 'dca', 'DCAR_019553' => 'dca', 'DCAR_020952' => 'dca', 'DCAR_021739' => 'dca', 'DCAR_027407' => 'dca', 'DCAR_027913' => 'dca', 'DCAR_028066' => 'dca', 'Dinv05899' => 'din', 'Dinv07563' => 'din', 'Dinv08010' => 'din', 'Dinv14125' => 'din', 'Dinv20172' => 'din', 'Dinv30743' => 'din', 'Dinv31229' => 'din', 'Dinv34162' => 'din', 'Dinv36028' => 'din', 'Dinv39368' => 'din', 'Dinv40565' => 'din', 'Dinv41706' => 'din', 'Duzib052G0089' => 'dzi', 'Duzib116G0641' => 'dzi', 'Duzib132G0069' => 'dzi', 'Duzib132G1219' => 'dzi', 'Duzib147G0278' => 'dzi', 'Duzib160G0480' => 'dzi', 'Duzib170G0661' => 'dzi', 'Duzib177G0591' => 'dzi', 'Duzib187G1353' => 'dzi', 'Duzib192G0858' => 'dzi', 'Duzib192G0883' => 'dzi', 'Duzib213G0506' => 'dzi', 'Duzib235G0289' => 'dzi', 'Duzib251G0422' => 'dzi', 'ECA232G3898' => 'eca', 'ECA233G5950' => 'eca', 'ECA234G1699' => 'eca', 'ECA234G2421' => 'eca', 'ECA236G0426' => 'eca', 'ECA236G4331' => 'eca', 'ECA248G2573' => 'eca', 'EL10Ac1g00077' => 'bvu', 'EL10Ac1g01746' => 'bvu', 'EL10Ac2g03464' => 'bvu', 'EL10Ac4g08176' => 'bvu', 'EL10Ac7g17521' => 'bvu', 'EL10Ac8g20386' => 'bvu', 'EL10Ac9g21343' => 'bvu', 'EL10Ac9g22688' => 'bvu', 'Eucgr.B03434' => 'egr', 'Eucgr.D00618' => 'egr', 'Eucgr.E02395' => 'egr', 'Eucgr.F01129' => 'egr', 'Eucgr.F02622' => 'egr', 'Eucgr.F04207' => 'egr', 'FAN01G0570' => 'fan', 'FAN03G3351' => 'fan', 'FAN06G3702' => 'fan', 'FAN07G2149' => 'fan', 'FAN10G3758' => 'fan', 'FAN11G1170' => 'fan', 'FAN11G2050' => 'fan', 'FAN11G2724' => 'fan', 'FAN12G1700' => 'fan', 'FAN12G2028' => 'fan', 'FAN15G1160' => 'fan', 'FAN15G3063' => 'fan', 'FAN16G2540' => 'fan', 'FAN16G3077' => 'fan', 'FAN16G3624' => 'fan', 'FAN17G0221' => 'fan', 'FAN20G2492' => 'fan', 'FAN20G2905' => 'fan', 'FAN21G0548' => 'fan', 'FAN21G1300' => 'fan', 'FAN22G0077' => 'fan', 'FAN22G1315' => 'fan', 'FAN24G1280' => 'fan', 'FAN24G1445' => 'fan', 'FAN24G3527' => 'fan', 'FAN25G0464' => 'fan', 'FAN25G2885' => 'fan', 'FAN25G3270' => 'fan', 'FAN27G1101' => 'fan', 'FAN27G2846' => 'fan', 'FAN27G3524' => 'fan', 'FvH4_2g11770' => 'fve', 'FvH4_2g15630' => 'fve', 'FvH4_3g05570' => 'fve', 'FvH4_3g09110' => 'fve', 'FvH4_3g19940' => 'fve', 'FvH4_4g04821' => 'fve', 'FvH4_4g31480' => 'fve', 'FvH4_7g01740' => 'fve', 'Glyma.05G130400' => 'gma', 'Glyma.05G156400' => 'gma', 'Glyma.07G197000' => 'gma', 'Glyma.08G085151' => 'gma', 'Glyma.08G114500' => 'gma', 'Glyma.08G300400' => 'gma', 'Glyma.10G215800' => 'gma', 'Glyma.12G224400' => 'gma', 'Glyma.13G179300' => 'gma', 'Glyma.13G218151' => 'gma', 'Glyma.13G238800' => 'gma', 'Glyma.13G276900' => 'gma', 'Glyma.14G078200' => 'gma', 'Glyma.15G074500' => 'gma', 'Glyma.15G094100' => 'gma', 'Glyma.17G247200' => 'gma', 'Glyma.18G120100' => 'gma', 'Glyma.20G176000' => 'gma', 'Gohir.A01G063600' => 'ghi', 'Gohir.A01G170301' => 'ghi', 'Gohir.A02G060500' => 'ghi', 'Gohir.A05G133850' => 'ghi', 'Gohir.A05G161400' => 'ghi', 'Gohir.A06G012900' => 'ghi', 'Gohir.A06G035901' => 'ghi', 'Gohir.A06G127100' => 'ghi', 'Gohir.A06G210500' => 'ghi', 'Gohir.A08G008650' => 'ghi', 'Gohir.A09G072700' => 'ghi', 'Gohir.A09G088301' => 'ghi', 'Gohir.A10G040600' => 'ghi', 'Gohir.A12G036300' => 'ghi', 'Gohir.A12G143350' => 'ghi', 'Gohir.A12G165500' => 'ghi', 'Gohir.A13G145700' => 'ghi', 'Gohir.D01G050000' => 'ghi', 'Gohir.D01G051366' => 'ghi', 'Gohir.D01G161350' => 'ghi', 'Gohir.D02G065900' => 'ghi', 'Gohir.D05G164200' => 'ghi', 'Gohir.D05G355500' => 'ghi', 'Gohir.D06G010400' => 'ghi', 'Gohir.D06G111250' => 'ghi', 'Gohir.D06G132000' => 'ghi', 'Gohir.D06G210500' => 'ghi', 'Gohir.D07G165675' => 'ghi', 'Gohir.D08G062240' => 'ghi', 'Gohir.D08G086101' => 'ghi', 'Gohir.D08G138060' => 'ghi', 'Gohir.D09G072300' => 'ghi', 'Gohir.D10G041400' => 'ghi', 'Gohir.D11G191020' => 'ghi', 'Gohir.D11G212066' => 'ghi', 'Gohir.D12G036300' => 'ghi', 'Gohir.D12G168600' => 'ghi', 'Gohir.D13G150600' => 'ghi', 'Gorai.001G057300' => 'gra', 'Gorai.002G069900' => 'gra', 'Gorai.002G200000' => 'gra', 'Gorai.003G067600' => 'gra', 'Gorai.005G074800' => 'gra', 'Gorai.006G087300' => 'gra', 'Gorai.008G037500' => 'gra', 'Gorai.008G181400' => 'gra', 'Gorai.009G169400' => 'gra', 'Gorai.009G387900' => 'gra', 'Gorai.010G013300' => 'gra', 'Gorai.010G153800' => 'gra', 'Gorai.010G255800' => 'gra', 'Gorai.011G043700' => 'gra', 'Gorai.011G198900' => 'gra', 'Gorai.013G168400' => 'gra', 'GSVIVG01005212001' => 'vvi', 'GSVIVG01006163001' => 'vvi', 'GSVIVG01009625001' => 'vvi', 'GSVIVG01014338001' => 'vvi', 'GSVIVG01020005001' => 'vvi', 'GSVIVG01021450001' => 'vvi', 'GSVIVG01023975001' => 'vvi', 'GSVIVG01034490001' => 'vvi', 'HanXRQChr04g0112071' => 'han', 'HanXRQChr05g0131151' => 'han', 'HanXRQChr09g0262371' => 'han', 'HanXRQChr09g0268401' => 'han', 'HanXRQChr10g0279241' => 'han', 'HanXRQChr10g0297961' => 'han', 'HanXRQChr11g0326231' => 'han', 'HanXRQChr11g0328471' => 'han', 'HanXRQChr16g0507941' => 'han', 'HanXRQChr17g0560211' => 'han', 'Haze_02108' => 'cav', 'Haze_02428' => 'cav', 'Haze_05593' => 'cav', 'Haze_06448' => 'cav', 'Haze_09427' => 'cav', 'Haze_12022' => 'cav', 'Haze_17612' => 'cav', 'Haze_17928' => 'cav', 'Hma1.2p1_0032F.1_g019250' => 'hma', 'Hma1.2p1_0163F.1_g072690' => 'hma', 'Hma1.2p1_0265F.1_g106710' => 'hma', 'Hma1.2p1_0286F.1_g113970' => 'hma', 'Hma1.2p1_0363F.1_g136640' => 'hma', 'Hma1.2p1_0584F.1_g183470' => 'hma', 'Hma1.2p1_0885F.1_g232570' => 'hma', 'HPP92_006022' => 'vpl', 'HPP92_007320' => 'vpl', 'HPP92_011521' => 'vpl', 'HPP92_019387' => 'vpl', 'HPP92_024038' => 'vpl', 'Hund05891' => 'sun', 'Hund06450' => 'sun', 'Hund12053' => 'sun', 'Hund16800' => 'sun', 'Hund21222' => 'sun', 'Hund22896' => 'sun', 'Hund23746' => 'sun', 'Hund27083' => 'sun', 'Lalb_Chr02g0141831' => 'lal', 'Lalb_Chr02g0141841' => 'lal', 'Lalb_Chr05g0220411' => 'lal', 'Lalb_Chr06g0162081' => 'lal', 'Lalb_Chr09g0327651' => 'lal', 'Lalb_Chr13g0295051' => 'lal', 'Lalb_Chr15g0086801' => 'lal', 'Lalb_Chr16g0383781' => 'lal', 'Lalb_Chr16g0383791' => 'lal', 'Lalb_Chr18g0055441' => 'lal', 'Lalb_Chr18g0059611' => 'lal', 'Lalb_Chr20g0109661' => 'lal', 'Lalb_Chr20g0109831' => 'lal', 'Lalb_Chr20g0121871' => 'lal', 'Lalb_Chr22g0355361' => 'lal', 'Lalb_Chr25g0286371' => 'lal', 'Lj1A1187G43' => 'lonja', 'Lj1A1205T50' => 'lonja', 'Lj1A800G33' => 'lonja', 'Lj1C1187T7' => 'lonja', 'Lj1C843T11' => 'lonja', 'Lj1g0010940' => 'lja', 'Lj2A288T69' => 'lonja', 'Lj3g0024276' => 'lja', 'Lj4A47T76' => 'lonja', 'Lj4g0005805' => 'lja', 'Lj4g0006097' => 'lja', 'Lj4g0008528' => 'lja', 'Lj4g0024907' => 'lja', 'Lj5g0012472' => 'lja', 'Lj5g0018648' => 'lja', 'Lj6C789G1' => 'lonja', 'Lj6g0004000' => 'lja', 'Lj7A292G67' => 'lonja', 'Lj7A292T64' => 'lonja', 'Lj9A400T58' => 'lonja', 'Lsat_1_v5_gn_1_126181' => 'lsa', 'Lsat_1_v5_gn_4_123041' => 'lsa', 'Lsat_1_v5_gn_4_133620' => 'lsa', 'Lsat_1_v5_gn_4_53221' => 'lsa', 'Lsat_1_v5_gn_4_71961' => 'lsa', 'Lsat_1_v5_gn_7_105241' => 'lsa', 'Lsat_1_v5_gn_7_21361' => 'lsa', 'Lsat_1_v5_gn_7_28860' => 'lsa', 'Lsat_1_v5_gn_7_31260' => 'lsa', 'Lsat_1_v5_gn_8_52801' => 'lsa', 'Manes.02G191400' => 'mes', 'Manes.03G110100' => 'mes', 'Manes.04G071100' => 'mes', 'Manes.05G100500' => 'mes', 'Manes.05G164700' => 'mes', 'Manes.15G087000' => 'mes', 'Manes.15G121500' => 'mes', 'Manes.16G028300' => 'mes', 'Manes.17G046100' => 'mes', 'Manes.17G069800' => 'mes', 'Manes.18G100500' => 'mes', 'Mapoly0002s0109' => 'mpo', 'Mapoly0024s0007' => 'mpo', 'Mapoly0089s0032' => 'mpo', 'MBI04_g42241_MAGBIO' => 'mbi', 'MBI05_g11988_MAGBIO' => 'mbi', 'MBI05_g35452_MAGBIO' => 'mbi', 'MBI07_g30179_MAGBIO' => 'mbi', 'MBI07_g35859_MAGBIO' => 'mbi', 'MBI07_g35860_MAGBIO' => 'mbi', 'MBI07_g37166_MAGBIO' => 'mbi', 'MBI08_g18172_MAGBIO' => 'mbi', 'MBI09_g08441_MAGBIO' => 'mbi', 'MBI13_g01676_MAGBIO' => 'mbi', 'MBI14_g42955_MAGBIO' => 'mbi', 'MBI16_g13161_MAGBIO' => 'mbi', 'MBI17_g27204_MAGBIO' => 'mbi', 'MBI19_g21595_MAGBIO' => 'mbi', 'MD00G1148400' => 'mdo', 'MD02G1301200' => 'mdo', 'MD03G1227800' => 'mdo', 'MD05G1041100' => 'mdo', 'MD05G1124800' => 'mdo', 'MD05G1284000' => 'mdo', 'MD05G1338800' => 'mdo', 'MD05G1338900' => 'mdo', 'MD07G1022800' => 'mdo', 'MD10G1047500' => 'mdo', 'MD10G1127500' => 'mdo', 'MD10G1262300' => 'mdo', 'MD10G1293800' => 'mdo', 'MD16G1074300' => 'mdo', 'Medtr1g021670' => 'mtr', 'Medtr1g096320' => 'mtr', 'Medtr2g013690' => 'mtr', 'Medtr2g019450' => 'mtr', 'Medtr2g085170' => 'mtr', 'Medtr4g088785' => 'mtr', 'Medtr8g055930' => 'mtr', 'Medtr8g085850' => 'mtr', 'MELO3C002605.2' => 'cme', 'MELO3C003891.2' => 'cme', 'MELO3C004012.2' => 'cme', 'MELO3C007134.2' => 'cme', 'MELO3C008118.2' => 'cme', 'MELO3C016700.2' => 'cme', 'MELO3C024127.2' => 'cme', 'MELO3C033361.2' => 'cme', 'MELO3C033362.2' => 'cme', 'Migut.C00430' => 'egut', 'Migut.C01246' => 'egut', 'Migut.E00101' => 'egut', 'Migut.H01486' => 'egut', 'Migut.H01939' => 'egut', 'Migut.K00360' => 'egut', 'Migut.M00910' => 'egut', 'Migut.M01139' => 'egut', 'Migut.N02677' => 'egut', 'MSTRG.13252' => 'ama', 'MSTRG.14701' => 'ama', 'MSTRG.1521' => 'ama', 'MSTRG.15884' => 'ama', 'MSTRG.16242' => 'ama', 'MSTRG.22285' => 'ama', 'MSTRG.22444' => 'ama', 'MSTRG.2349' => 'ama', 'MSTRG.26308' => 'ama', 'MSTRG.28296' => 'ama', 'MSTRG.9895' => 'ama', 'Nitab4.5_0000110g0060' => 'nta', 'Nitab4.5_0000420g0130' => 'nta', 'Nitab4.5_0000422g0030' => 'nta', 'Nitab4.5_0000560g0180' => 'nta', 'Nitab4.5_0000703g0100' => 'nta', 'Nitab4.5_0000786g0200' => 'nta', 'Nitab4.5_0001336g0020' => 'nta', 'Nitab4.5_0001796g0030' => 'nta', 'Nitab4.5_0003348g0060' => 'nta', 'Nitab4.5_0003698g0040' => 'nta', 'Nitab4.5_0003942g0090' => 'nta', 'Nitab4.5_0004775g0070' => 'nta', 'Nitab4.5_0004864g0030' => 'nta', 'Nitab4.5_0005615g0020' => 'nta', 'Nitab4.5_0009288g0030' => 'nta', 'Nitab4.5_0009341g0010' => 'nta', 'Nitab4.5_0009535g0010' => 'nta', 'Nn1g03995' => 'nnu', 'Nn1g04100' => 'nnu', 'Nn1g06530' => 'nnu', 'Nn3g16404' => 'nnu', 'Nn3g17212' => 'nnu', 'Nn3g20776' => 'nnu', 'Nn3g21923' => 'nnu', 'Nn5g27737' => 'nnu', 'Nn5g29461' => 'nnu', 'Nn7g38355' => 'nnu', 'Nn8g39873' => 'nnu', 'Oeu000548.2' => 'oeu', 'Oeu004672.1' => 'oeu', 'Oeu015605.2' => 'oeu', 'Oeu016092.1' => 'oeu', 'Oeu017879.3' => 'oeu', 'Oeu024910.1' => 'oeu', 'Oeu028965.1' => 'oeu', 'Oeu031269.1' => 'oeu', 'Oeu031270.1' => 'oeu', 'Oeu032535.1' => 'oeu', 'Oeu034151.1' => 'oeu', 'Oeu034152.1' => 'oeu', 'Oeu034588.2' => 'oeu', 'Oeu050846.1' => 'oeu', 'Oeu050849.2' => 'oeu', 'Oeu051063.2' => 'oeu', 'Oeu052368.1' => 'oeu', 'Oeu052370.1' => 'oeu', 'Os01g0210400' => 'osa', 'Os01g0304300' => 'osa', 'Os01g0749100' => 'osa', 'Os02g0745800' => 'osa', 'Os03g0769050' => 'osa', 'Os05g0531500' => 'osa', 'Os06g0724300' => 'osa', 'Os11g0198100' => 'osa', 'Peaxi162Scf00069g01425' => 'pax', 'Peaxi162Scf00280g00811' => 'pax', 'Peaxi162Scf00310g00615' => 'pax', 'Peaxi162Scf00362g00542' => 'pax', 'Peaxi162Scf00461g00310' => 'pax', 'Peaxi162Scf00530g00118' => 'pax', 'Peaxi162Scf00541g00057' => 'pax', 'Peaxi162Scf00661g00017' => 'pax', 'Peaxi162Scf00926g00027' => 'pax', 'Peaxi162Scf01064g00263' => 'pax', 'Peaxi162Scf01211g00135' => 'pax', 'PGR004G2336' => 'pgr', 'PGR042G0327' => 'pgr', 'PGR042G1957' => 'pgr', 'PGR042G2003' => 'pgr', 'PGR042G3929' => 'pgr', 'PGR083G1137' => 'pgr', 'PGR083G1364' => 'pgr', 'PGSC0003DMG400003381' => 'stu', 'PGSC0003DMG400003417' => 'stu', 'PGSC0003DMG400008981' => 'stu', 'PGSC0003DMG400012417' => 'stu', 'PGSC0003DMG400012823' => 'stu', 'PGSC0003DMG400016885' => 'stu', 'PGSC0003DMG400022812' => 'stu', 'PGSC0003DMG400029726' => 'stu', 'PGSC0003DMG401009243' => 'stu', 'PGSC0003DMG401031505' => 'stu', 'PGSC0003DMG402031505' => 'stu', 'Phvul.001G017600' => 'pvu', 'Phvul.002G193500' => 'pvu', 'Phvul.002G228900' => 'pvu', 'Phvul.002G236800' => 'pvu', 'Phvul.003G049500' => 'pvu', 'Phvul.005G072000' => 'pvu', 'Phvul.006G164800' => 'pvu', 'Phvul.006G185100' => 'pvu', 'Phvul.007G090000' => 'pvu', 'Potri.001G399800' => 'ptr', 'Potri.002G149900' => 'ptr', 'Potri.004G044100' => 'ptr', 'Potri.004G177600' => 'ptr', 'Potri.009G138000' => 'ptr', 'Potri.010G094000' => 'ptr', 'Potri.011G053000' => 'ptr', 'Potri.011G119300' => 'ptr', 'Potri.013G113700' => 'ptr', 'Potri.018G107800' => 'ptr', 'Potri.019G084100' => 'ptr', 'Pp3c14_23720' => 'ppa', 'Pp3c16_6340' => 'ppa', 'Pp3c23_13420' => 'ppa', 'Pp3c24_2740' => 'ppa', 'Pp3c25_860' => 'ppa', 'Pp3c8_21750' => 'ppa', 'Prupe.1G273000' => 'ppe', 'Prupe.1G273700' => 'ppe', 'Prupe.1G274100' => 'ppe', 'Prupe.2G023300' => 'ppe', 'Prupe.4G048000' => 'ppe', 'Prupe.4G080400' => 'ppe', 'Prupe.4G181200' => 'ppe', 'Prupe.8G056900' => 'ppe', 'Prupe.8G168700' => 'ppe', 'Psat1g189080' => 'psa', 'Psat1g204760' => 'psa', 'Psat4g175560' => 'psa', 'Psat4g177720' => 'psa', 'Psat5g244240' => 'psa', 'Psat6g010720' => 'psa', 'Psat6g187200' => 'psa', 'Psat7g072040' => 'psa', 'PSO017G3501' => 'pso', 'PSO063G2148' => 'pso', 'PSO063G5608' => 'pso', 'PSO210G6392' => 'pso', 'PSO541G2319' => 'pso', 'PSO541G2836' => 'pso', 'PSO541G4012' => 'pso', 'PSO541G6253' => 'pso', 'PSO675G0580' => 'pso', 'PSO675G0856' => 'pso', 'PSO675G5635' => 'pso', 'PSO675G9157' => 'pso', 'PSO832G1660' => 'pso', 'PSO832G1969' => 'pso', 'QL02p007186' => 'qlo', 'QL02p033904' => 'qlo', 'QL03p064391' => 'qlo', 'QL05p040593' => 'qlo', 'QL05p058242' => 'qlo', 'QL08p021825' => 'qlo', 'QL11p004981' => 'qlo', 'RcHm_v2.0_Chr1g0318301' => 'rch', 'RcHm_v2.0_Chr4g0418501' => 'rch', 'RcHm_v2.0_Chr4g0439971' => 'rch', 'RcHm_v2.0_Chr5g0008541' => 'rch', 'RcHm_v2.0_Chr5g0014101' => 'rch', 'RcHm_v2.0_Chr5g0014131' => 'rch', 'RcHm_v2.0_Chr5g0033621' => 'rch', 'RcHm_v2.0_Chr6g0272041' => 'rch', 'RcHm_v2.0_Chr6g0278831' => 'rch', 'Rhsim02G0130400' => 'rsi', 'Rhsim02G0171100' => 'rsi', 'Rhsim05G0053000' => 'rsi', 'Rhsim05G0053100' => 'rsi', 'Rhsim06G0096500' => 'rsi', 'Rhsim06G0096600' => 'rsi', 'Rhsim06G0199100' => 'rsi', 'Rhsim12G0062300' => 'rsi', 'Rhsim12G0062800' => 'rsi', 'Sabra02G0118600' => 'sbr', 'Sabra04G0027300' => 'sbr', 'Sabra04G0119500' => 'sbr', 'Sabra08G0112500' => 'sbr', 'Sabra11G0036800' => 'sbr', 'Sabra11G0103800' => 'sbr', 'Sabra13G0096300' => 'sbr', 'Sabra16G0262300' => 'sbr', 'Sabra18G0091700' => 'sbr', 'Sabra19G0095400' => 'sbr', 'SalBow6G3080' => 'sbo', 'SalBow7G1157' => 'sbo', 'SalBow7G2123' => 'sbo', 'SalBow7G2285' => 'sbo', 'SalBow7G3537' => 'sbo', 'SalBow8G2947' => 'sbo', 'SalBow8G4463' => 'sbo', 'SalBow8G5466' => 'sbo', 'Sc01g0001750' => 'sci', 'Sc02g0006640' => 'sci', 'Sc02g0006670' => 'sci', 'Sc04g0008220' => 'sci', 'Sc05g0006190' => 'sci', 'Sc08g0002760' => 'sci', 'Sc17g0006170' => 'sci', 'Sc22g0002050' => 'sci', 'Sc23g0001190' => 'sci', 'Sc24g0000980' => 'sci', 'Sed0006245' => 'sed', 'Sed0007543' => 'sed', 'Sed0009411' => 'sed', 'Sed0010765' => 'sed', 'Sed0012944' => 'sed', 'Sed0014682' => 'sed', 'Sed0016174' => 'sed', 'Sed0016796' => 'sed', 'Sed0020317' => 'sed', 'Sed0021467' => 'sed', 'SEGI_01316' => 'sgi', 'SEGI_03374' => 'sgi', 'SEGI_16265' => 'sgi', 'SEGI_18569' => 'sgi', 'SEGI_20351' => 'sgi', 'SEGI_26395' => 'sgi', 'SEGI_29469' => 'sgi', 'SEGI_34771' => 'sgi', 'SEGI_36769' => 'sgi', 'SEGI_37139' => 'sgi', 'SGA_v2.0_scaffold100G29687' => 'sas', 'SGA_v2.0_scaffold118G32472' => 'sas', 'SGA_v2.0_scaffold14G07051' => 'sas', 'SGA_v2.0_scaffold183G39845' => 'sas', 'SGA_v2.0_scaffold1G00174' => 'sas', 'SGA_v2.0_scaffold22G09714' => 'sas', 'SGA_v2.0_scaffold333G48992' => 'sas', 'SGA_v2.0_scaffold46G17491' => 'sas', 'SGA_v2.0_scaffold49G18294' => 'sas', 'SGA_v2.0_scaffold63G21658' => 'sas', 'SHI01741' => 'shi', 'SHI05771' => 'shi', 'SHI18077' => 'shi', 'SHI20525' => 'shi', 'SHI20527' => 'shi', 'SHI20528' => 'shi', 'SMO172G0185' => 'smo', 'SMO198G0020' => 'smo', 'SMO351G0006' => 'smo', 'SMO356G0118' => 'smo', 'SMO358G0296' => 'smo', 'SMO367G0079' => 'smo', 'SMO367G1277' => 'smo', 'Solyc01g014220.3' => 'sly', 'Solyc01g111770.2' => 'sly', 'Solyc02g078180.3' => 'sly', 'Solyc03g006430.3' => 'sly', 'Solyc03g006456.1' => 'sly', 'Solyc03g079860.2' => 'sly', 'Solyc04g079770.3' => 'sly', 'Solyc05g007430.4' => 'sly', 'Solyc07g063150.3' => 'sly', 'Solyc08g016620.3' => 'sly', 'Solyc09g057590.3' => 'sly', 'Solyc09g057600.1' => 'sly', 'Solyc10g009050.3' => 'sly', 'Solyc11g017420.2' => 'sly', 'Sopen01g053810' => 'spe', 'Sopen02g023040' => 'spe', 'Sopen03g002440' => 'spe', 'Sopen04g033350' => 'spe', 'Sopen05g003310' => 'spe', 'Sopen07g004050' => 'spe', 'Sopen07g031340' => 'spe', 'Sopen08g006990' => 'spe', 'Sopen10g004830' => 'spe', 'Sopen11g009370' => 'spe', 'Sp1g24450' => 'spa', 'Sp1g29670' => 'spa', 'Sp1g39600' => 'spa', 'Sp2g11080' => 'spa', 'Sp2g13970' => 'spa', 'Sp4g16130' => 'spa', 'Sp6g13080' => 'spa', 'Sp7g37270' => 'spa', 'TAR371G0065' => 'tar', 'TAR376G0340' => 'tar', 'TAR376G0435' => 'tar', 'TAR381G0002' => 'tar', 'TAR381G1236' => 'tar', 'TAR624G0055' => 'tar', 'TAR624G0324' => 'tar', 'TAR624G0696' => 'tar', 'TAR624G0906' => 'tar', 'TAR625G0107' => 'tar', 'TAR626G0015' => 'tar', 'TAR626G1356' => 'tar', 'TAR627G0888' => 'tar', 'TAR628G0399' => 'tar', 'TAR628G1327' => 'tar', 'TAR629G2831' => 'tar', 'TAR629G2874' => 'tar', 'TAR633G1432' => 'tar', 'TAR633G2771' => 'tar', 'THA.LOC104803394' => 'tha', 'THA.LOC104805153' => 'tha', 'THA.LOC104806784' => 'tha', 'THA.LOC104810473' => 'tha', 'THA.LOC104813100' => 'tha', 'THA.LOC104814215' => 'tha', 'THA.LOC104815554' => 'tha', 'THA.LOC104820544' => 'tha', 'THA.LOC104824754' => 'tha', 'THA.LOC104827717' => 'tha', 'Thecc.02G031400' => 'tca', 'Thecc.02G055900' => 'tca', 'Thecc.02G350800' => 'tca', 'Thecc.06G150900' => 'tca', 'Thecc.06G186600' => 'tca', 'Thecc.07G089600' => 'tca', 'Thecc.08G020400' => 'tca', 'Thecc.08G182100' => 'tca', 'Thhalv10000873m.g' => 'esa', 'Thhalv10004185m.g' => 'esa', 'Thhalv10006981m.g' => 'esa', 'Thhalv10007204m.g' => 'esa', 'Thhalv10011374m.g' => 'esa', 'Thhalv10013482m.g' => 'esa', 'Thhalv10017801m.g' => 'esa', 'Thhalv10024983m.g' => 'esa', 'TPR.G12072' => 'tpr', 'TPR.G15769' => 'tpr', 'TPR.G16504' => 'tpr', 'TPR.G16506' => 'tpr', 'TPR.G24345' => 'tpr', 'TPR.G26666' => 'tpr', 'TPR.G27320' => 'tpr', 'TPR.G31819' => 'tpr', 'TPR.G38879' => 'tpr', 'TPR.G39015' => 'tpr', 'TPR.G8819' => 'tpr', 'TWI09G0924' => 'twi', 'TWI12G0811' => 'twi', 'TWI12G1294' => 'twi', 'TWI31G0150' => 'twi', 'TWI36G1262' => 'twi', 'TWI38G1287' => 'twi', 'TWI38G1633' => 'twi', 'TWI38G1982' => 'twi', 'TWI39G0116' => 'twi', 'TWI60G1011' => 'twi', 'TWI63G0171' => 'twi', 'TWI73G0839' => 'twi', 'TWI79G1511' => 'twi', 'unitig_0.g915' => 'ugi', 'unitig_0.g916' => 'ugi', 'unitig_21.g20219' => 'ugi', 'unitig_21.g20416' => 'ugi', 'unitig_578.g16132' => 'ugi', 'unitig_578.g16718' => 'ugi', 'unitig_62.g23481' => 'ugi', 'unitig_744.g24535' => 'ugi', 'unitig_749.g13525' => 'ugi', 'vmacro01248' => 'vma', 'vmacro02290' => 'vma', 'vmacro10946' => 'vma', 'vmacro11865' => 'vma', 'vmacro12493' => 'vma', 'vmacro17322' => 'vma', 'vmacro21599' => 'vma', 'vmacro23041' => 'vma', 'VMungo0251G0004' => 'vmu', 'VMungo0251G2639' => 'vmu', 'VMungo0251G2967' => 'vmu', 'VMungo0540G0864' => 'vmu', 'VMungo0540G1569' => 'vmu', 'VMungo0647G0317' => 'vmu', 'VMungo0720G1373' => 'vmu', 'VMungo0720G1508' => 'vmu', 'VMungo1080G0485' => 'vmu', 'VMungo1215G3177' => 'vmu', 'Zm00001eb112600' => 'zma', 'Zm00001eb120220' => 'zma', 'Zm00001eb153240' => 'zma', 'Zm00001eb168880' => 'zma', 'Zm00001eb213920' => 'zma', 'Zm00001eb228280' => 'zma', 'Zm00001eb254580' => 'zma', 'Zm00001eb272180' => 'zma', 'Zm00001eb293190' => 'zma', 'Zm00001eb322930' => 'zma', 'Zm00001eb353360' => 'zma', 'Zm00001eb353390' => 'zma', 'Zm00001eb353430' => 'zma', 'Zm00001eb353440' => 'zma', 'Zm00001eb353780' => 'zma' ) $gf_id = 'HOM05D000499' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000499' ) $data_identifier = 'HOM05D000499' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 29, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 12, 'amhyb' => (int) 8, 'aly' => (int) 12, 'aox' => (int) 9, 'arhy' => (int) 26, 'ath' => (int) 8, 'atr' => (int) 7, 'acertr' => (int) 10, 'cqu' => (int) 15, 'bca' => (int) 29, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 11, 'cansat' => (int) 8, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 9, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 8, 'cpa' => (int) 10, 'csa' => (int) 7, 'camsi' => (int) 20, 'dca' => (int) 8, 'din' => (int) 12, 'dzi' => (int) 14, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 6, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 38, 'gra' => (int) 16, 'vvi' => (int) 8, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 5, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 11, 'lja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 11, 'mpo' => (int) 3, 'mbi' => (int) 14, 'mdo' => (int) 14, 'mtr' => (int) 8, 'cme' => (int) 9, 'egut' => (int) 9, 'ama' => (int) 11, 'nta' => (int) 17, 'nnu' => (int) 11, 'oeu' => (int) 18, 'osa' => (int) 8, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 6, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 9, 'rsi' => (int) 9, 'sbr' => (int) 10, 'sbo' => (int) 8, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 10, 'sas' => (int) 10, 'shi' => (int) 6, 'smo' => (int) 7, 'sly' => (int) 14, 'spe' => (int) 10, 'spa' => (int) 8, 'tar' => (int) 19, 'tha' => (int) 10, 'tca' => (int) 8, 'esa' => (int) 8, 'tpr' => (int) 11, 'twi' => (int) 13, 'ugi' => (int) 9, 'vma' => (int) 8, 'vmu' => (int) 10, 'zma' => (int) 15 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb353780' $species_info = array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ) $local_species = 'pgr' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000499', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1066', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p29780' => 'bna', 'A02p33180' => 'bna', 'A03p16470' => 'bna', 'A03p66010' => 'bna', 'A04p25970' => 'bna', 'A06p01270' => 'bna', 'A06p46080' => 'bna', 'A07p11400' => 'bna', 'A08p01840' => 'bna', 'A08p08230' => 'bna', 'A08p25740' => 'bna', 'A09p32070' => 'bna', 'A09p37830' => 'bna', 'A09p42840' => 'bna', 'A09p42850' => 'bna', 'Aa31LG10G2060' => 'aar', 'Aa31LG2G7410' => 'aar', 'Aa31LG6G10200' => 'aar', 'Aa31LG6G16680' => 'aar', 'Aa31LG6G8470' => 'aar', 'Aa31LG9G12730' => 'aar', 'Aa31LG9G13680' => 'aar', 'Aa31LG9G14920' => 'aar', 'Aa31LG9G6650' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4977' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5467' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3254' => 'aag', 'Actinidia02578' => 'ach', 'Actinidia07693' => 'ach', 'Actinidia08413' => 'ach', 'Actinidia08414' => 'ach', 'Actinidia15289' => 'ach', 'Actinidia19871' => 'ach', 'Actinidia21475' => 'ach', 'Actinidia22576' => 'ach', 'Actinidia28327' => 'ach', 'Actinidia32491' => 'ach', 'Actinidia39463' => 'ach', 'Actinidia39571' => 'ach', 'Ah.01g013750' => 'amhyb', 'Ah.01g023210' => 'amhyb', 'Ah.04g164850' => 'amhyb', 'Ah.05g178060' => 'amhyb', 'Ah.07g204270' => 'amhyb', 'Ah.07g208480' => 'amhyb', 'Ah.09g237410' => 'amhyb', 'Ah.14g089460' => 'amhyb', 'AL1G41790' => 'aly', 'AL1G49050' => 'aly', 'AL1G53810' => 'aly', 'AL1G61400' => 'aly', 'AL4G18580' => 'aly', 'AL5G12510' => 'aly', 'AL5G12540' => 'aly', 'AL6G43230' => 'aly', 'AL7G10370' => 'aly', 'AL7G19250' => 'aly', 'AL8G12240' => 'aly', 'AL8G18540' => 'aly', 'Aqoxy1G02409' => 'aox', 'Aqoxy2G03993' => 'aox', 'Aqoxy3G03357' => 'aox', 'Aqoxy4G00785' => 'aox', 'Aqoxy5G02598' => 'aox', 'Aqoxy6G00132' => 'aox', 'Aqoxy7G01776' => 'aox', 'Aqoxy7G02316' => 'aox', 'Aqoxy7G03973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.12AFKW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B8730' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27IQR1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3F75VG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3RE0GA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41TCQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.527VTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FIR39' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5W8UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DA38EV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ63HS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H1I32C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HC27T5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4M8AP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7N3CZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9UVDZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LS1NQA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT1D4B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SKC4TM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCFV76' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF9Q1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQWD9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1ZM88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WE07RT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YCK7VH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJE6Q6' => 'arhy', 'AT1G28240' => 'ath', 'AT1G34550' => 'ath', 'AT1G53040' => 'ath', 'AT2G02910' => 'ath', 'AT4G09630' => 'ath', 'AT4G38500' => 'ath', 'AT5G42660' => 'ath', 'AT5G46220' => 'ath', 'ATR0152G026' => 'atr', 'ATR0564G343' => 'atr', 'ATR0706G151' => 'atr', 'ATR0733G207' => 'atr', 'ATR0751G234' => 'atr', 'ATR0807G048' => 'atr', 'ATR1091G084' => 'atr', 'Atru.chr10.1229' => 'acertr', 'Atru.chr10.1230' => 'acertr', 'Atru.chr10.1874' => 'acertr', 'Atru.chr11.1808' => 'acertr', 'Atru.chr13.1795' => 'acertr', 'Atru.chr13.570' => 'acertr', 'Atru.chr2.2608' => 'acertr', 'Atru.chr2.2609' => 'acertr', 'Atru.chr5.3428' => 'acertr', 'Atru.chr8.1171' => 'acertr', 'AUR62004651' => 'cqu', 'AUR62008675' => 'cqu', 'AUR62010014' => 'cqu', 'AUR62013004' => 'cqu', 'AUR62014825' => 'cqu', 'AUR62015015' => 'cqu', 'AUR62015151' => 'cqu', 'AUR62017020' => 'cqu', 'AUR62019422' => 'cqu', 'AUR62023570' => 'cqu', 'AUR62025571' => 'cqu', 'AUR62029098' => 'cqu', 'AUR62033863' => 'cqu', 'AUR62034296' => 'cqu', 'AUR62040075' => 'cqu', 'BcaB02g07334' => 'bca', 'BcaB02g10575' => 'bca', 'BcaB03g12119' => 'bca', 'BcaB03g12120' => 'bca', 'BcaB03g13945' => 'bca', 'BcaB04g17123' => 'bca', 'BcaB04g17867' => 'bca', 'BcaB04g19839' => 'bca', 'BcaB07g30317' => 'bca', 'BcaB07g32432' => 'bca', 'BcaB07g33362' => 'bca', 'BcaB08g36611' => 'bca', 'BcaC01g00028' => 'bca', 'BcaC01g01356' => 'bca', 'BcaC01g02034' => 'bca', 'BcaC01g06051' => 'bca', 'BcaC03g16839' => 'bca', 'BcaC03g17176' => 'bca', 'BcaC05g26829' => 'bca', 'BcaC06g31490' => 'bca', 'BcaC06g35344' => 'bca', 'BcaC06g36570' => 'bca', 'BcaC07g37537' => 'bca', 'BcaC08g43491' => 'bca', 'BcaC08g43773' => 'bca', 'BcaNung00234' => 'bca', 'BcaNung01982' => 'bca', 'BcaNung03707' => 'bca', 'BcaNung06454' => 'bca', 'BolC2t10762H' => 'bol', 'BolC2t11191H' => 'bol', 'BolC3t14322H' => 'bol', 'BolC3t19747H' => 'bol', 'BolC3t21425H' => 'bol', 'BolC4t27800H' => 'bol', 'BolC5t31423H' => 'bol', 'BolC6t35951H' => 'bol', 'BolC6t36282H' => 'bol', 'BolC7t40678H' => 'bol', 'BolC7t40679H' => 'bol', 'BolC7t42222H' => 'bol', 'BolC7t43492H' => 'bol', 'BolC7t46785H' => 'bol', 'BolC8t47853H' => 'bol', 'BolC9t56805H' => 'bol', 'BraA02t08000Z' => 'bra', 'BraA02t08341Z' => 'bra', 'BraA03t10936Z' => 'bra', 'BraA03t15657Z' => 'bra', 'BraA04t18100Z' => 'bra', 'BraA05t20523Z' => 'bra', 'BraA06t23353Z' => 'bra', 'BraA06t27473Z' => 'bra', 'BraA06t27769Z' => 'bra', 'BraA07t28928Z' => 'bra', 'BraA08t32236Z' => 'bra', 'BraA08t32841Z' => 'bra', 'BraA08t34524Z' => 'bra', 'BraA09t38742Z' => 'bra', 'BraA09t39295Z' => 'bra', 'C02p47180' => 'bna', 'C02p50990' => 'bna', 'C03p19360' => 'bna', 'C03p74950' => 'bna', 'C03p91000' => 'bna', 'C04p63260' => 'bna', 'C05p27050' => 'bna', 'C06p08750' => 'bna', 'C06p11490' => 'bna', 'C07p02820' => 'bna', 'C07p17180' => 'bna', 'C07p29440' => 'bna', 'C07p63730' => 'bna', 'C09p39260' => 'bna', 'CAN.G1164.34' => 'can', 'CAN.G1164.39' => 'can', 'CAN.G1530.3' => 'can', 'CAN.G162.61' => 'can', 'CAN.G176.6' => 'can', 'CAN.G289.49' => 'can', 'CAN.G370.21' => 'can', 'CAN.G370.22' => 'can', 'CAN.G371.117' => 'can', 'CAN.G58.37' => 'can', 'CAN.G588.98' => 'can', 'CANSAT21G2266' => 'cansat', 'CANSAT25G2799' => 'cansat', 'CANSAT35G0862' => 'cansat', 'CANSAT35G1704' => 'cansat', 'CANSAT35G1760' => 'cansat', 'CANSAT56G3971' => 'cansat', 'CANSAT56G4116' => 'cansat', 'CANSAT80G1259' => 'cansat', 'CARHR027730' => 'chi', 'CARHR033880' => 'chi', 'CARHR043270' => 'chi', 'CARHR145330' => 'chi', 'CARHR145340' => 'chi', 'CARHR175570' => 'chi', 'CARHR181570' => 'chi', 'CARHR258470' => 'chi', 'CARHR260490' => 'chi', 'CARHR294220' => 'chi', 'Carub.0001s2668' => 'cru', 'Carub.0001s3257' => 'cru', 'Carub.0001s4220' => 'cru', 'Carub.0005s0179' => 'cru', 'Carub.0006s2807' => 'cru', 'Carub.0007s0039' => 'cru', 'Carub.0008s0169' => 'cru', 'Carub.0008s0636' => 'cru', 'Ca_00338_v3' => 'car', 'Ca_00542_v3' => 'car', 'Ca_01844_v3' => 'car', 'Ca_10611_v3' => 'car', 'Ca_13326_v3' => 'car', 'Ca_17944_v3' => 'car', 'Ca_18546_v3' => 'car', 'Ca_24219_v3' => 'car', 'Ca_29972_v3' => 'car', 'CBR_g3681' => 'cbr', 'CBR_g40021' => 'cbr', 'Cc01_g08140' => 'ccan', 'Cc02_g13410' => 'ccan', 'Cc02_g37480' => 'ccan', 'Cc05_g12030' => 'ccan', 'Cc09_g03370' => 'ccan', 'Cc09_g10300' => 'ccan', 'Cc10_g03530' => 'ccan', 'Cc10_g11380' => 'ccan', 'CDE01G0176' => 'cde', 'CDE02G0675' => 'cde', 'CDE02G0942' => 'cde', 'CDE02G1153' => 'cde', 'CDE02G4177' => 'cde', 'CDE04G2117' => 'cde', 'CDE04G2736' => 'cde', 'CDE08G1161' => 'cde', 'CDE09G1238' => 'cde', 'Cfa000467' => 'cfa', 'Cfa000947' => 'cfa', 'Cfa004969' => 'cfa', 'Cfa005284' => 'cfa', 'Cfa008993' => 'cfa', 'Cfa018187' => 'cfa', 'Cfa018454' => 'cfa', 'Cfa020585' => 'cfa', 'Ciclev10000424m.g' => 'ccl', 'Ciclev10003605m.g' => 'ccl', 'Ciclev10007828m.g' => 'ccl', 'Ciclev10014620m.g' => 'ccl', 'Ciclev10015169m.g' => 'ccl', 'Ciclev10018291m.g' => 'ccl', 'Ciclev10028256m.g' => 'ccl', 'Ciclev10033822m.g' => 'ccl', 'CiPaw.05G060300' => 'cil', 'CiPaw.05G085000' => 'cil', 'CiPaw.06G083700' => 'cil', 'CiPaw.06G120300' => 'cil', 'CiPaw.09G060500' => 'cil', 'CiPaw.09G123800' => 'cil', 'CiPaw.11G169700' => 'cil', 'CiPaw.12G118300' => 'cil', 'CiPaw.15G071000' => 'cil', 'CiPaw.15G081900' => 'cil', 'ClCG01G024610' => 'cla', 'ClCG03G006070' => 'cla', 'ClCG05G019250' => 'cla', 'ClCG09G009500' => 'cla', 'ClCG11G008200' => 'cla', 'ClCG11G018080' => 'cla', 'COL.COLO4_17373' => 'col', 'COL.COLO4_22994' => 'col', 'COL.COLO4_26389' => 'col', 'COL.COLO4_27170' => 'col', 'COL.COLO4_31074' => 'col', 'COL.COLO4_31465' => 'col', 'COL.COLO4_36438' => 'col', 'COL.COLO4_36439' => 'col', 'Cpa.g.c38781' => 'cpa', 'Cpa.g.sc128.12' => 'cpa', 'Cpa.g.sc166.7' => 'cpa', 'Cpa.g.sc166.8' => 'cpa', 'Cpa.g.sc20.111' => 'cpa', 'Cpa.g.sc27.31' => 'cpa', 'Cpa.g.sc64.36' => 'cpa', 'Cpa.g.sc64.37' => 'cpa', 'Cpa.g.sc66.49' => 'cpa', 'Cpa.g.sc80.64' => 'cpa', 'CsaV3_1G012320' => 'csa', 'CsaV3_2G008480' => 'csa', 'CsaV3_2G033450' => 'csa', 'CsaV3_3G044830' => 'csa', 'CsaV3_4G033710' => 'csa', 'CsaV3_6G051730' => 'csa', 'CsaV3_7G025350' => 'csa', 'CSS0001067' => 'camsi', 'CSS0005996' => 'camsi', 'CSS0006590' => 'camsi', 'CSS0009673' => 'camsi', 'CSS0010201' => 'camsi', 'CSS0010549' => 'camsi', 'CSS0011364' => 'camsi', 'CSS0014473' => 'camsi', 'CSS0014961' => 'camsi', 'CSS0020191' => 'camsi', 'CSS0021165' => 'camsi', 'CSS0022306' => 'camsi', 'CSS0030591' => 'camsi', 'CSS0030696' => 'camsi', 'CSS0032653' => 'camsi', 'CSS0037487' => 'camsi', 'CSS0041102' => 'camsi', 'CSS0041261' => 'camsi', 'CSS0046246' => 'camsi', 'CSS0049256' => 'camsi', 'DCAR_004075' => 'dca', 'DCAR_011538' => 'dca', 'DCAR_019553' => 'dca', 'DCAR_020952' => 'dca', 'DCAR_021739' => 'dca', 'DCAR_027407' => 'dca', 'DCAR_027913' => 'dca', 'DCAR_028066' => 'dca', 'Dinv05899' => 'din', 'Dinv07563' => 'din', 'Dinv08010' => 'din', 'Dinv14125' => 'din', 'Dinv20172' => 'din', 'Dinv30743' => 'din', 'Dinv31229' => 'din', 'Dinv34162' => 'din', 'Dinv36028' => 'din', 'Dinv39368' => 'din', 'Dinv40565' => 'din', 'Dinv41706' => 'din', 'Duzib052G0089' => 'dzi', 'Duzib116G0641' => 'dzi', 'Duzib132G0069' => 'dzi', 'Duzib132G1219' => 'dzi', 'Duzib147G0278' => 'dzi', 'Duzib160G0480' => 'dzi', 'Duzib170G0661' => 'dzi', 'Duzib177G0591' => 'dzi', 'Duzib187G1353' => 'dzi', 'Duzib192G0858' => 'dzi', 'Duzib192G0883' => 'dzi', 'Duzib213G0506' => 'dzi', 'Duzib235G0289' => 'dzi', 'Duzib251G0422' => 'dzi', 'ECA232G3898' => 'eca', 'ECA233G5950' => 'eca', 'ECA234G1699' => 'eca', 'ECA234G2421' => 'eca', 'ECA236G0426' => 'eca', 'ECA236G4331' => 'eca', 'ECA248G2573' => 'eca', 'EL10Ac1g00077' => 'bvu', 'EL10Ac1g01746' => 'bvu', 'EL10Ac2g03464' => 'bvu', 'EL10Ac4g08176' => 'bvu', 'EL10Ac7g17521' => 'bvu', 'EL10Ac8g20386' => 'bvu', 'EL10Ac9g21343' => 'bvu', 'EL10Ac9g22688' => 'bvu', 'Eucgr.B03434' => 'egr', 'Eucgr.D00618' => 'egr', 'Eucgr.E02395' => 'egr', 'Eucgr.F01129' => 'egr', 'Eucgr.F02622' => 'egr', 'Eucgr.F04207' => 'egr', 'FAN01G0570' => 'fan', 'FAN03G3351' => 'fan', 'FAN06G3702' => 'fan', 'FAN07G2149' => 'fan', 'FAN10G3758' => 'fan', 'FAN11G1170' => 'fan', 'FAN11G2050' => 'fan', 'FAN11G2724' => 'fan', 'FAN12G1700' => 'fan', 'FAN12G2028' => 'fan', 'FAN15G1160' => 'fan', 'FAN15G3063' => 'fan', 'FAN16G2540' => 'fan', 'FAN16G3077' => 'fan', 'FAN16G3624' => 'fan', 'FAN17G0221' => 'fan', 'FAN20G2492' => 'fan', 'FAN20G2905' => 'fan', 'FAN21G0548' => 'fan', 'FAN21G1300' => 'fan', 'FAN22G0077' => 'fan', 'FAN22G1315' => 'fan', 'FAN24G1280' => 'fan', 'FAN24G1445' => 'fan', 'FAN24G3527' => 'fan', 'FAN25G0464' => 'fan', 'FAN25G2885' => 'fan', 'FAN25G3270' => 'fan', 'FAN27G1101' => 'fan', 'FAN27G2846' => 'fan', 'FAN27G3524' => 'fan', 'FvH4_2g11770' => 'fve', 'FvH4_2g15630' => 'fve', 'FvH4_3g05570' => 'fve', 'FvH4_3g09110' => 'fve', 'FvH4_3g19940' => 'fve', 'FvH4_4g04821' => 'fve', 'FvH4_4g31480' => 'fve', 'FvH4_7g01740' => 'fve', 'Glyma.05G130400' => 'gma', 'Glyma.05G156400' => 'gma', 'Glyma.07G197000' => 'gma', 'Glyma.08G085151' => 'gma', 'Glyma.08G114500' => 'gma', 'Glyma.08G300400' => 'gma', 'Glyma.10G215800' => 'gma', 'Glyma.12G224400' => 'gma', 'Glyma.13G179300' => 'gma', 'Glyma.13G218151' => 'gma', 'Glyma.13G238800' => 'gma', 'Glyma.13G276900' => 'gma', 'Glyma.14G078200' => 'gma', 'Glyma.15G074500' => 'gma', 'Glyma.15G094100' => 'gma', 'Glyma.17G247200' => 'gma', 'Glyma.18G120100' => 'gma', 'Glyma.20G176000' => 'gma', 'Gohir.A01G063600' => 'ghi', 'Gohir.A01G170301' => 'ghi', 'Gohir.A02G060500' => 'ghi', 'Gohir.A05G133850' => 'ghi', 'Gohir.A05G161400' => 'ghi', 'Gohir.A06G012900' => 'ghi', 'Gohir.A06G035901' => 'ghi', 'Gohir.A06G127100' => 'ghi', 'Gohir.A06G210500' => 'ghi', 'Gohir.A08G008650' => 'ghi', 'Gohir.A09G072700' => 'ghi', 'Gohir.A09G088301' => 'ghi', 'Gohir.A10G040600' => 'ghi', 'Gohir.A12G036300' => 'ghi', 'Gohir.A12G143350' => 'ghi', 'Gohir.A12G165500' => 'ghi', 'Gohir.A13G145700' => 'ghi', 'Gohir.D01G050000' => 'ghi', 'Gohir.D01G051366' => 'ghi', 'Gohir.D01G161350' => 'ghi', 'Gohir.D02G065900' => 'ghi', 'Gohir.D05G164200' => 'ghi', 'Gohir.D05G355500' => 'ghi', 'Gohir.D06G010400' => 'ghi', 'Gohir.D06G111250' => 'ghi', 'Gohir.D06G132000' => 'ghi', 'Gohir.D06G210500' => 'ghi', 'Gohir.D07G165675' => 'ghi', 'Gohir.D08G062240' => 'ghi', 'Gohir.D08G086101' => 'ghi', 'Gohir.D08G138060' => 'ghi', 'Gohir.D09G072300' => 'ghi', 'Gohir.D10G041400' => 'ghi', 'Gohir.D11G191020' => 'ghi', 'Gohir.D11G212066' => 'ghi', 'Gohir.D12G036300' => 'ghi', 'Gohir.D12G168600' => 'ghi', 'Gohir.D13G150600' => 'ghi', 'Gorai.001G057300' => 'gra', 'Gorai.002G069900' => 'gra', 'Gorai.002G200000' => 'gra', 'Gorai.003G067600' => 'gra', 'Gorai.005G074800' => 'gra', 'Gorai.006G087300' => 'gra', 'Gorai.008G037500' => 'gra', 'Gorai.008G181400' => 'gra', 'Gorai.009G169400' => 'gra', 'Gorai.009G387900' => 'gra', 'Gorai.010G013300' => 'gra', 'Gorai.010G153800' => 'gra', 'Gorai.010G255800' => 'gra', 'Gorai.011G043700' => 'gra', 'Gorai.011G198900' => 'gra', 'Gorai.013G168400' => 'gra', 'GSVIVG01005212001' => 'vvi', 'GSVIVG01006163001' => 'vvi', 'GSVIVG01009625001' => 'vvi', 'GSVIVG01014338001' => 'vvi', 'GSVIVG01020005001' => 'vvi', 'GSVIVG01021450001' => 'vvi', 'GSVIVG01023975001' => 'vvi', 'GSVIVG01034490001' => 'vvi', 'HanXRQChr04g0112071' => 'han', 'HanXRQChr05g0131151' => 'han', 'HanXRQChr09g0262371' => 'han', 'HanXRQChr09g0268401' => 'han', 'HanXRQChr10g0279241' => 'han', 'HanXRQChr10g0297961' => 'han', 'HanXRQChr11g0326231' => 'han', 'HanXRQChr11g0328471' => 'han', 'HanXRQChr16g0507941' => 'han', 'HanXRQChr17g0560211' => 'han', 'Haze_02108' => 'cav', 'Haze_02428' => 'cav', 'Haze_05593' => 'cav', 'Haze_06448' => 'cav', 'Haze_09427' => 'cav', 'Haze_12022' => 'cav', 'Haze_17612' => 'cav', 'Haze_17928' => 'cav', 'Hma1.2p1_0032F.1_g019250' => 'hma', 'Hma1.2p1_0163F.1_g072690' => 'hma', 'Hma1.2p1_0265F.1_g106710' => 'hma', 'Hma1.2p1_0286F.1_g113970' => 'hma', 'Hma1.2p1_0363F.1_g136640' => 'hma', 'Hma1.2p1_0584F.1_g183470' => 'hma', 'Hma1.2p1_0885F.1_g232570' => 'hma', 'HPP92_006022' => 'vpl', 'HPP92_007320' => 'vpl', 'HPP92_011521' => 'vpl', 'HPP92_019387' => 'vpl', 'HPP92_024038' => 'vpl', 'Hund05891' => 'sun', 'Hund06450' => 'sun', 'Hund12053' => 'sun', 'Hund16800' => 'sun', 'Hund21222' => 'sun', 'Hund22896' => 'sun', 'Hund23746' => 'sun', 'Hund27083' => 'sun', 'Lalb_Chr02g0141831' => 'lal', 'Lalb_Chr02g0141841' => 'lal', 'Lalb_Chr05g0220411' => 'lal', 'Lalb_Chr06g0162081' => 'lal', 'Lalb_Chr09g0327651' => 'lal', 'Lalb_Chr13g0295051' => 'lal', 'Lalb_Chr15g0086801' => 'lal', 'Lalb_Chr16g0383781' => 'lal', 'Lalb_Chr16g0383791' => 'lal', 'Lalb_Chr18g0055441' => 'lal', 'Lalb_Chr18g0059611' => 'lal', 'Lalb_Chr20g0109661' => 'lal', 'Lalb_Chr20g0109831' => 'lal', 'Lalb_Chr20g0121871' => 'lal', 'Lalb_Chr22g0355361' => 'lal', 'Lalb_Chr25g0286371' => 'lal', 'Lj1A1187G43' => 'lonja', 'Lj1A1205T50' => 'lonja', 'Lj1A800G33' => 'lonja', 'Lj1C1187T7' => 'lonja', 'Lj1C843T11' => 'lonja', 'Lj1g0010940' => 'lja', 'Lj2A288T69' => 'lonja', 'Lj3g0024276' => 'lja', 'Lj4A47T76' => 'lonja', 'Lj4g0005805' => 'lja', 'Lj4g0006097' => 'lja', 'Lj4g0008528' => 'lja', 'Lj4g0024907' => 'lja', 'Lj5g0012472' => 'lja', 'Lj5g0018648' => 'lja', 'Lj6C789G1' => 'lonja', 'Lj6g0004000' => 'lja', 'Lj7A292G67' => 'lonja', 'Lj7A292T64' => 'lonja', 'Lj9A400T58' => 'lonja', 'Lsat_1_v5_gn_1_126181' => 'lsa', 'Lsat_1_v5_gn_4_123041' => 'lsa', 'Lsat_1_v5_gn_4_133620' => 'lsa', 'Lsat_1_v5_gn_4_53221' => 'lsa', 'Lsat_1_v5_gn_4_71961' => 'lsa', 'Lsat_1_v5_gn_7_105241' => 'lsa', 'Lsat_1_v5_gn_7_21361' => 'lsa', 'Lsat_1_v5_gn_7_28860' => 'lsa', 'Lsat_1_v5_gn_7_31260' => 'lsa', 'Lsat_1_v5_gn_8_52801' => 'lsa', 'Manes.02G191400' => 'mes', 'Manes.03G110100' => 'mes', 'Manes.04G071100' => 'mes', 'Manes.05G100500' => 'mes', 'Manes.05G164700' => 'mes', 'Manes.15G087000' => 'mes', 'Manes.15G121500' => 'mes', 'Manes.16G028300' => 'mes', 'Manes.17G046100' => 'mes', 'Manes.17G069800' => 'mes', 'Manes.18G100500' => 'mes', 'Mapoly0002s0109' => 'mpo', 'Mapoly0024s0007' => 'mpo', 'Mapoly0089s0032' => 'mpo', 'MBI04_g42241_MAGBIO' => 'mbi', 'MBI05_g11988_MAGBIO' => 'mbi', 'MBI05_g35452_MAGBIO' => 'mbi', 'MBI07_g30179_MAGBIO' => 'mbi', 'MBI07_g35859_MAGBIO' => 'mbi', 'MBI07_g35860_MAGBIO' => 'mbi', 'MBI07_g37166_MAGBIO' => 'mbi', 'MBI08_g18172_MAGBIO' => 'mbi', 'MBI09_g08441_MAGBIO' => 'mbi', 'MBI13_g01676_MAGBIO' => 'mbi', 'MBI14_g42955_MAGBIO' => 'mbi', 'MBI16_g13161_MAGBIO' => 'mbi', 'MBI17_g27204_MAGBIO' => 'mbi', 'MBI19_g21595_MAGBIO' => 'mbi', 'MD00G1148400' => 'mdo', 'MD02G1301200' => 'mdo', 'MD03G1227800' => 'mdo', 'MD05G1041100' => 'mdo', 'MD05G1124800' => 'mdo', 'MD05G1284000' => 'mdo', 'MD05G1338800' => 'mdo', 'MD05G1338900' => 'mdo', 'MD07G1022800' => 'mdo', 'MD10G1047500' => 'mdo', 'MD10G1127500' => 'mdo', 'MD10G1262300' => 'mdo', 'MD10G1293800' => 'mdo', 'MD16G1074300' => 'mdo', 'Medtr1g021670' => 'mtr', 'Medtr1g096320' => 'mtr', 'Medtr2g013690' => 'mtr', 'Medtr2g019450' => 'mtr', 'Medtr2g085170' => 'mtr', 'Medtr4g088785' => 'mtr', 'Medtr8g055930' => 'mtr', 'Medtr8g085850' => 'mtr', 'MELO3C002605.2' => 'cme', 'MELO3C003891.2' => 'cme', 'MELO3C004012.2' => 'cme', 'MELO3C007134.2' => 'cme', 'MELO3C008118.2' => 'cme', 'MELO3C016700.2' => 'cme', 'MELO3C024127.2' => 'cme', 'MELO3C033361.2' => 'cme', 'MELO3C033362.2' => 'cme', 'Migut.C00430' => 'egut', 'Migut.C01246' => 'egut', 'Migut.E00101' => 'egut', 'Migut.H01486' => 'egut', 'Migut.H01939' => 'egut', 'Migut.K00360' => 'egut', 'Migut.M00910' => 'egut', 'Migut.M01139' => 'egut', 'Migut.N02677' => 'egut', 'MSTRG.13252' => 'ama', 'MSTRG.14701' => 'ama', 'MSTRG.1521' => 'ama', 'MSTRG.15884' => 'ama', 'MSTRG.16242' => 'ama', 'MSTRG.22285' => 'ama', 'MSTRG.22444' => 'ama', 'MSTRG.2349' => 'ama', 'MSTRG.26308' => 'ama', 'MSTRG.28296' => 'ama', 'MSTRG.9895' => 'ama', 'Nitab4.5_0000110g0060' => 'nta', 'Nitab4.5_0000420g0130' => 'nta', 'Nitab4.5_0000422g0030' => 'nta', 'Nitab4.5_0000560g0180' => 'nta', 'Nitab4.5_0000703g0100' => 'nta', 'Nitab4.5_0000786g0200' => 'nta', 'Nitab4.5_0001336g0020' => 'nta', 'Nitab4.5_0001796g0030' => 'nta', 'Nitab4.5_0003348g0060' => 'nta', 'Nitab4.5_0003698g0040' => 'nta', 'Nitab4.5_0003942g0090' => 'nta', 'Nitab4.5_0004775g0070' => 'nta', 'Nitab4.5_0004864g0030' => 'nta', 'Nitab4.5_0005615g0020' => 'nta', 'Nitab4.5_0009288g0030' => 'nta', 'Nitab4.5_0009341g0010' => 'nta', 'Nitab4.5_0009535g0010' => 'nta', 'Nn1g03995' => 'nnu', 'Nn1g04100' => 'nnu', 'Nn1g06530' => 'nnu', 'Nn3g16404' => 'nnu', 'Nn3g17212' => 'nnu', 'Nn3g20776' => 'nnu', 'Nn3g21923' => 'nnu', 'Nn5g27737' => 'nnu', 'Nn5g29461' => 'nnu', 'Nn7g38355' => 'nnu', 'Nn8g39873' => 'nnu', 'Oeu000548.2' => 'oeu', 'Oeu004672.1' => 'oeu', 'Oeu015605.2' => 'oeu', 'Oeu016092.1' => 'oeu', 'Oeu017879.3' => 'oeu', 'Oeu024910.1' => 'oeu', 'Oeu028965.1' => 'oeu', 'Oeu031269.1' => 'oeu', 'Oeu031270.1' => 'oeu', 'Oeu032535.1' => 'oeu', 'Oeu034151.1' => 'oeu', 'Oeu034152.1' => 'oeu', 'Oeu034588.2' => 'oeu', 'Oeu050846.1' => 'oeu', 'Oeu050849.2' => 'oeu', 'Oeu051063.2' => 'oeu', 'Oeu052368.1' => 'oeu', 'Oeu052370.1' => 'oeu', 'Os01g0210400' => 'osa', 'Os01g0304300' => 'osa', 'Os01g0749100' => 'osa', 'Os02g0745800' => 'osa', 'Os03g0769050' => 'osa', 'Os05g0531500' => 'osa', 'Os06g0724300' => 'osa', 'Os11g0198100' => 'osa', 'Peaxi162Scf00069g01425' => 'pax', 'Peaxi162Scf00280g00811' => 'pax', 'Peaxi162Scf00310g00615' => 'pax', 'Peaxi162Scf00362g00542' => 'pax', 'Peaxi162Scf00461g00310' => 'pax', 'Peaxi162Scf00530g00118' => 'pax', 'Peaxi162Scf00541g00057' => 'pax', 'Peaxi162Scf00661g00017' => 'pax', 'Peaxi162Scf00926g00027' => 'pax', 'Peaxi162Scf01064g00263' => 'pax', 'Peaxi162Scf01211g00135' => 'pax', 'PGR004G2336' => 'pgr', 'PGR042G0327' => 'pgr', 'PGR042G1957' => 'pgr', 'PGR042G2003' => 'pgr', 'PGR042G3929' => 'pgr', 'PGR083G1137' => 'pgr', 'PGR083G1364' => 'pgr', 'PGSC0003DMG400003381' => 'stu', 'PGSC0003DMG400003417' => 'stu', 'PGSC0003DMG400008981' => 'stu', 'PGSC0003DMG400012417' => 'stu', 'PGSC0003DMG400012823' => 'stu', 'PGSC0003DMG400016885' => 'stu', 'PGSC0003DMG400022812' => 'stu', 'PGSC0003DMG400029726' => 'stu', 'PGSC0003DMG401009243' => 'stu', 'PGSC0003DMG401031505' => 'stu', 'PGSC0003DMG402031505' => 'stu', 'Phvul.001G017600' => 'pvu', 'Phvul.002G193500' => 'pvu', 'Phvul.002G228900' => 'pvu', 'Phvul.002G236800' => 'pvu', 'Phvul.003G049500' => 'pvu', 'Phvul.005G072000' => 'pvu', 'Phvul.006G164800' => 'pvu', 'Phvul.006G185100' => 'pvu', 'Phvul.007G090000' => 'pvu', 'Potri.001G399800' => 'ptr', 'Potri.002G149900' => 'ptr', 'Potri.004G044100' => 'ptr', 'Potri.004G177600' => 'ptr', 'Potri.009G138000' => 'ptr', 'Potri.010G094000' => 'ptr', 'Potri.011G053000' => 'ptr', 'Potri.011G119300' => 'ptr', 'Potri.013G113700' => 'ptr', 'Potri.018G107800' => 'ptr', 'Potri.019G084100' => 'ptr', 'Pp3c14_23720' => 'ppa', 'Pp3c16_6340' => 'ppa', 'Pp3c23_13420' => 'ppa', 'Pp3c24_2740' => 'ppa', 'Pp3c25_860' => 'ppa', 'Pp3c8_21750' => 'ppa', 'Prupe.1G273000' => 'ppe', 'Prupe.1G273700' => 'ppe', 'Prupe.1G274100' => 'ppe', 'Prupe.2G023300' => 'ppe', 'Prupe.4G048000' => 'ppe', 'Prupe.4G080400' => 'ppe', 'Prupe.4G181200' => 'ppe', 'Prupe.8G056900' => 'ppe', 'Prupe.8G168700' => 'ppe', 'Psat1g189080' => 'psa', 'Psat1g204760' => 'psa', 'Psat4g175560' => 'psa', 'Psat4g177720' => 'psa', 'Psat5g244240' => 'psa', 'Psat6g010720' => 'psa', 'Psat6g187200' => 'psa', 'Psat7g072040' => 'psa', 'PSO017G3501' => 'pso', 'PSO063G2148' => 'pso', 'PSO063G5608' => 'pso', 'PSO210G6392' => 'pso', 'PSO541G2319' => 'pso', 'PSO541G2836' => 'pso', 'PSO541G4012' => 'pso', 'PSO541G6253' => 'pso', 'PSO675G0580' => 'pso', 'PSO675G0856' => 'pso', 'PSO675G5635' => 'pso', 'PSO675G9157' => 'pso', 'PSO832G1660' => 'pso', 'PSO832G1969' => 'pso', 'QL02p007186' => 'qlo', 'QL02p033904' => 'qlo', 'QL03p064391' => 'qlo', 'QL05p040593' => 'qlo', 'QL05p058242' => 'qlo', 'QL08p021825' => 'qlo', 'QL11p004981' => 'qlo', 'RcHm_v2.0_Chr1g0318301' => 'rch', 'RcHm_v2.0_Chr4g0418501' => 'rch', 'RcHm_v2.0_Chr4g0439971' => 'rch', 'RcHm_v2.0_Chr5g0008541' => 'rch', 'RcHm_v2.0_Chr5g0014101' => 'rch', 'RcHm_v2.0_Chr5g0014131' => 'rch', 'RcHm_v2.0_Chr5g0033621' => 'rch', 'RcHm_v2.0_Chr6g0272041' => 'rch', 'RcHm_v2.0_Chr6g0278831' => 'rch', 'Rhsim02G0130400' => 'rsi', 'Rhsim02G0171100' => 'rsi', 'Rhsim05G0053000' => 'rsi', 'Rhsim05G0053100' => 'rsi', 'Rhsim06G0096500' => 'rsi', 'Rhsim06G0096600' => 'rsi', 'Rhsim06G0199100' => 'rsi', 'Rhsim12G0062300' => 'rsi', 'Rhsim12G0062800' => 'rsi', 'Sabra02G0118600' => 'sbr', 'Sabra04G0027300' => 'sbr', 'Sabra04G0119500' => 'sbr', 'Sabra08G0112500' => 'sbr', 'Sabra11G0036800' => 'sbr', 'Sabra11G0103800' => 'sbr', 'Sabra13G0096300' => 'sbr', 'Sabra16G0262300' => 'sbr', 'Sabra18G0091700' => 'sbr', 'Sabra19G0095400' => 'sbr', 'SalBow6G3080' => 'sbo', 'SalBow7G1157' => 'sbo', 'SalBow7G2123' => 'sbo', 'SalBow7G2285' => 'sbo', 'SalBow7G3537' => 'sbo', 'SalBow8G2947' => 'sbo', 'SalBow8G4463' => 'sbo', 'SalBow8G5466' => 'sbo', 'Sc01g0001750' => 'sci', 'Sc02g0006640' => 'sci', 'Sc02g0006670' => 'sci', 'Sc04g0008220' => 'sci', 'Sc05g0006190' => 'sci', 'Sc08g0002760' => 'sci', 'Sc17g0006170' => 'sci', 'Sc22g0002050' => 'sci', 'Sc23g0001190' => 'sci', 'Sc24g0000980' => 'sci', 'Sed0006245' => 'sed', 'Sed0007543' => 'sed', 'Sed0009411' => 'sed', 'Sed0010765' => 'sed', 'Sed0012944' => 'sed', 'Sed0014682' => 'sed', 'Sed0016174' => 'sed', 'Sed0016796' => 'sed', 'Sed0020317' => 'sed', 'Sed0021467' => 'sed', 'SEGI_01316' => 'sgi', 'SEGI_03374' => 'sgi', 'SEGI_16265' => 'sgi', 'SEGI_18569' => 'sgi', 'SEGI_20351' => 'sgi', 'SEGI_26395' => 'sgi', 'SEGI_29469' => 'sgi', 'SEGI_34771' => 'sgi', 'SEGI_36769' => 'sgi', 'SEGI_37139' => 'sgi', 'SGA_v2.0_scaffold100G29687' => 'sas', 'SGA_v2.0_scaffold118G32472' => 'sas', 'SGA_v2.0_scaffold14G07051' => 'sas', 'SGA_v2.0_scaffold183G39845' => 'sas', 'SGA_v2.0_scaffold1G00174' => 'sas', 'SGA_v2.0_scaffold22G09714' => 'sas', 'SGA_v2.0_scaffold333G48992' => 'sas', 'SGA_v2.0_scaffold46G17491' => 'sas', 'SGA_v2.0_scaffold49G18294' => 'sas', 'SGA_v2.0_scaffold63G21658' => 'sas', 'SHI01741' => 'shi', 'SHI05771' => 'shi', 'SHI18077' => 'shi', 'SHI20525' => 'shi', 'SHI20527' => 'shi', 'SHI20528' => 'shi', 'SMO172G0185' => 'smo', 'SMO198G0020' => 'smo', 'SMO351G0006' => 'smo', 'SMO356G0118' => 'smo', 'SMO358G0296' => 'smo', 'SMO367G0079' => 'smo', 'SMO367G1277' => 'smo', 'Solyc01g014220.3' => 'sly', 'Solyc01g111770.2' => 'sly', 'Solyc02g078180.3' => 'sly', 'Solyc03g006430.3' => 'sly', 'Solyc03g006456.1' => 'sly', 'Solyc03g079860.2' => 'sly', 'Solyc04g079770.3' => 'sly', 'Solyc05g007430.4' => 'sly', 'Solyc07g063150.3' => 'sly', 'Solyc08g016620.3' => 'sly', 'Solyc09g057590.3' => 'sly', 'Solyc09g057600.1' => 'sly', 'Solyc10g009050.3' => 'sly', 'Solyc11g017420.2' => 'sly', 'Sopen01g053810' => 'spe', 'Sopen02g023040' => 'spe', 'Sopen03g002440' => 'spe', 'Sopen04g033350' => 'spe', 'Sopen05g003310' => 'spe', 'Sopen07g004050' => 'spe', 'Sopen07g031340' => 'spe', 'Sopen08g006990' => 'spe', 'Sopen10g004830' => 'spe', 'Sopen11g009370' => 'spe', 'Sp1g24450' => 'spa', 'Sp1g29670' => 'spa', 'Sp1g39600' => 'spa', 'Sp2g11080' => 'spa', 'Sp2g13970' => 'spa', 'Sp4g16130' => 'spa', 'Sp6g13080' => 'spa', 'Sp7g37270' => 'spa', 'TAR371G0065' => 'tar', 'TAR376G0340' => 'tar', 'TAR376G0435' => 'tar', 'TAR381G0002' => 'tar', 'TAR381G1236' => 'tar', 'TAR624G0055' => 'tar', 'TAR624G0324' => 'tar', 'TAR624G0696' => 'tar', 'TAR624G0906' => 'tar', 'TAR625G0107' => 'tar', 'TAR626G0015' => 'tar', 'TAR626G1356' => 'tar', 'TAR627G0888' => 'tar', 'TAR628G0399' => 'tar', 'TAR628G1327' => 'tar', 'TAR629G2831' => 'tar', 'TAR629G2874' => 'tar', 'TAR633G1432' => 'tar', 'TAR633G2771' => 'tar', 'THA.LOC104803394' => 'tha', 'THA.LOC104805153' => 'tha', 'THA.LOC104806784' => 'tha', 'THA.LOC104810473' => 'tha', 'THA.LOC104813100' => 'tha', 'THA.LOC104814215' => 'tha', 'THA.LOC104815554' => 'tha', 'THA.LOC104820544' => 'tha', 'THA.LOC104824754' => 'tha', 'THA.LOC104827717' => 'tha', 'Thecc.02G031400' => 'tca', 'Thecc.02G055900' => 'tca', 'Thecc.02G350800' => 'tca', 'Thecc.06G150900' => 'tca', 'Thecc.06G186600' => 'tca', 'Thecc.07G089600' => 'tca', 'Thecc.08G020400' => 'tca', 'Thecc.08G182100' => 'tca', 'Thhalv10000873m.g' => 'esa', 'Thhalv10004185m.g' => 'esa', 'Thhalv10006981m.g' => 'esa', 'Thhalv10007204m.g' => 'esa', 'Thhalv10011374m.g' => 'esa', 'Thhalv10013482m.g' => 'esa', 'Thhalv10017801m.g' => 'esa', 'Thhalv10024983m.g' => 'esa', 'TPR.G12072' => 'tpr', 'TPR.G15769' => 'tpr', 'TPR.G16504' => 'tpr', 'TPR.G16506' => 'tpr', 'TPR.G24345' => 'tpr', 'TPR.G26666' => 'tpr', 'TPR.G27320' => 'tpr', 'TPR.G31819' => 'tpr', 'TPR.G38879' => 'tpr', 'TPR.G39015' => 'tpr', 'TPR.G8819' => 'tpr', 'TWI09G0924' => 'twi', 'TWI12G0811' => 'twi', 'TWI12G1294' => 'twi', 'TWI31G0150' => 'twi', 'TWI36G1262' => 'twi', 'TWI38G1287' => 'twi', 'TWI38G1633' => 'twi', 'TWI38G1982' => 'twi', 'TWI39G0116' => 'twi', 'TWI60G1011' => 'twi', 'TWI63G0171' => 'twi', 'TWI73G0839' => 'twi', 'TWI79G1511' => 'twi', 'unitig_0.g915' => 'ugi', 'unitig_0.g916' => 'ugi', 'unitig_21.g20219' => 'ugi', 'unitig_21.g20416' => 'ugi', 'unitig_578.g16132' => 'ugi', 'unitig_578.g16718' => 'ugi', 'unitig_62.g23481' => 'ugi', 'unitig_744.g24535' => 'ugi', 'unitig_749.g13525' => 'ugi', 'vmacro01248' => 'vma', 'vmacro02290' => 'vma', 'vmacro10946' => 'vma', 'vmacro11865' => 'vma', 'vmacro12493' => 'vma', 'vmacro17322' => 'vma', 'vmacro21599' => 'vma', 'vmacro23041' => 'vma', 'VMungo0251G0004' => 'vmu', 'VMungo0251G2639' => 'vmu', 'VMungo0251G2967' => 'vmu', 'VMungo0540G0864' => 'vmu', 'VMungo0540G1569' => 'vmu', 'VMungo0647G0317' => 'vmu', 'VMungo0720G1373' => 'vmu', 'VMungo0720G1508' => 'vmu', 'VMungo1080G0485' => 'vmu', 'VMungo1215G3177' => 'vmu', 'Zm00001eb112600' => 'zma', 'Zm00001eb120220' => 'zma', 'Zm00001eb153240' => 'zma', 'Zm00001eb168880' => 'zma', 'Zm00001eb213920' => 'zma', 'Zm00001eb228280' => 'zma', 'Zm00001eb254580' => 'zma', 'Zm00001eb272180' => 'zma', 'Zm00001eb293190' => 'zma', 'Zm00001eb322930' => 'zma', 'Zm00001eb353360' => 'zma', 'Zm00001eb353390' => 'zma', 'Zm00001eb353430' => 'zma', 'Zm00001eb353440' => 'zma', 'Zm00001eb353780' => 'zma' ), 'gf_id' => 'HOM05D000499', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000499' ), 'data_identifier' => 'HOM05D000499', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000499', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1066', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p29780' => 'bna', 'A02p33180' => 'bna', 'A03p16470' => 'bna', 'A03p66010' => 'bna', 'A04p25970' => 'bna', 'A06p01270' => 'bna', 'A06p46080' => 'bna', 'A07p11400' => 'bna', 'A08p01840' => 'bna', 'A08p08230' => 'bna', 'A08p25740' => 'bna', 'A09p32070' => 'bna', 'A09p37830' => 'bna', 'A09p42840' => 'bna', 'A09p42850' => 'bna', 'Aa31LG10G2060' => 'aar', 'Aa31LG2G7410' => 'aar', 'Aa31LG6G10200' => 'aar', 'Aa31LG6G16680' => 'aar', 'Aa31LG6G8470' => 'aar', 'Aa31LG9G12730' => 'aar', 'Aa31LG9G13680' => 'aar', 'Aa31LG9G14920' => 'aar', 'Aa31LG9G6650' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4977' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5467' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3254' => 'aag', 'Actinidia02578' => 'ach', 'Actinidia07693' => 'ach', 'Actinidia08413' => 'ach', 'Actinidia08414' => 'ach', 'Actinidia15289' => 'ach', 'Actinidia19871' => 'ach', 'Actinidia21475' => 'ach', 'Actinidia22576' => 'ach', 'Actinidia28327' => 'ach', 'Actinidia32491' => 'ach', 'Actinidia39463' => 'ach', 'Actinidia39571' => 'ach', 'Ah.01g013750' => 'amhyb', 'Ah.01g023210' => 'amhyb', 'Ah.04g164850' => 'amhyb', 'Ah.05g178060' => 'amhyb', 'Ah.07g204270' => 'amhyb', 'Ah.07g208480' => 'amhyb', 'Ah.09g237410' => 'amhyb', 'Ah.14g089460' => 'amhyb', 'AL1G41790' => 'aly', 'AL1G49050' => 'aly', 'AL1G53810' => 'aly', 'AL1G61400' => 'aly', 'AL4G18580' => 'aly', 'AL5G12510' => 'aly', 'AL5G12540' => 'aly', 'AL6G43230' => 'aly', 'AL7G10370' => 'aly', 'AL7G19250' => 'aly', 'AL8G12240' => 'aly', 'AL8G18540' => 'aly', 'Aqoxy1G02409' => 'aox', 'Aqoxy2G03993' => 'aox', 'Aqoxy3G03357' => 'aox', 'Aqoxy4G00785' => 'aox', 'Aqoxy5G02598' => 'aox', 'Aqoxy6G00132' => 'aox', 'Aqoxy7G01776' => 'aox', 'Aqoxy7G02316' => 'aox', 'Aqoxy7G03973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.12AFKW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B8730' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27IQR1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3F75VG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3RE0GA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41TCQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.527VTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FIR39' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5W8UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DA38EV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ63HS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H1I32C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HC27T5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4M8AP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7N3CZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9UVDZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LS1NQA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT1D4B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SKC4TM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCFV76' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF9Q1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQWD9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1ZM88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WE07RT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YCK7VH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJE6Q6' => 'arhy', 'AT1G28240' => 'ath', 'AT1G34550' => 'ath', 'AT1G53040' => 'ath', 'AT2G02910' => 'ath', 'AT4G09630' => 'ath', 'AT4G38500' => 'ath', 'AT5G42660' => 'ath', 'AT5G46220' => 'ath', 'ATR0152G026' => 'atr', 'ATR0564G343' => 'atr', 'ATR0706G151' => 'atr', 'ATR0733G207' => 'atr', 'ATR0751G234' => 'atr', 'ATR0807G048' => 'atr', 'ATR1091G084' => 'atr', 'Atru.chr10.1229' => 'acertr', 'Atru.chr10.1230' => 'acertr', 'Atru.chr10.1874' => 'acertr', 'Atru.chr11.1808' => 'acertr', 'Atru.chr13.1795' => 'acertr', 'Atru.chr13.570' => 'acertr', 'Atru.chr2.2608' => 'acertr', 'Atru.chr2.2609' => 'acertr', 'Atru.chr5.3428' => 'acertr', 'Atru.chr8.1171' => 'acertr', 'AUR62004651' => 'cqu', 'AUR62008675' => 'cqu', 'AUR62010014' => 'cqu', 'AUR62013004' => 'cqu', 'AUR62014825' => 'cqu', 'AUR62015015' => 'cqu', 'AUR62015151' => 'cqu', 'AUR62017020' => 'cqu', 'AUR62019422' => 'cqu', 'AUR62023570' => 'cqu', 'AUR62025571' => 'cqu', 'AUR62029098' => 'cqu', 'AUR62033863' => 'cqu', 'AUR62034296' => 'cqu', 'AUR62040075' => 'cqu', 'BcaB02g07334' => 'bca', 'BcaB02g10575' => 'bca', 'BcaB03g12119' => 'bca', 'BcaB03g12120' => 'bca', 'BcaB03g13945' => 'bca', 'BcaB04g17123' => 'bca', 'BcaB04g17867' => 'bca', 'BcaB04g19839' => 'bca', 'BcaB07g30317' => 'bca', 'BcaB07g32432' => 'bca', 'BcaB07g33362' => 'bca', 'BcaB08g36611' => 'bca', 'BcaC01g00028' => 'bca', 'BcaC01g01356' => 'bca', 'BcaC01g02034' => 'bca', 'BcaC01g06051' => 'bca', 'BcaC03g16839' => 'bca', 'BcaC03g17176' => 'bca', 'BcaC05g26829' => 'bca', 'BcaC06g31490' => 'bca', 'BcaC06g35344' => 'bca', 'BcaC06g36570' => 'bca', 'BcaC07g37537' => 'bca', 'BcaC08g43491' => 'bca', 'BcaC08g43773' => 'bca', 'BcaNung00234' => 'bca', 'BcaNung01982' => 'bca', 'BcaNung03707' => 'bca', 'BcaNung06454' => 'bca', 'BolC2t10762H' => 'bol', 'BolC2t11191H' => 'bol', 'BolC3t14322H' => 'bol', 'BolC3t19747H' => 'bol', 'BolC3t21425H' => 'bol', 'BolC4t27800H' => 'bol', 'BolC5t31423H' => 'bol', 'BolC6t35951H' => 'bol', 'BolC6t36282H' => 'bol', 'BolC7t40678H' => 'bol', 'BolC7t40679H' => 'bol', 'BolC7t42222H' => 'bol', 'BolC7t43492H' => 'bol', 'BolC7t46785H' => 'bol', 'BolC8t47853H' => 'bol', 'BolC9t56805H' => 'bol', 'BraA02t08000Z' => 'bra', 'BraA02t08341Z' => 'bra', 'BraA03t10936Z' => 'bra', 'BraA03t15657Z' => 'bra', 'BraA04t18100Z' => 'bra', 'BraA05t20523Z' => 'bra', 'BraA06t23353Z' => 'bra', 'BraA06t27473Z' => 'bra', 'BraA06t27769Z' => 'bra', 'BraA07t28928Z' => 'bra', 'BraA08t32236Z' => 'bra', 'BraA08t32841Z' => 'bra', 'BraA08t34524Z' => 'bra', 'BraA09t38742Z' => 'bra', 'BraA09t39295Z' => 'bra', 'C02p47180' => 'bna', 'C02p50990' => 'bna', 'C03p19360' => 'bna', 'C03p74950' => 'bna', 'C03p91000' => 'bna', 'C04p63260' => 'bna', 'C05p27050' => 'bna', 'C06p08750' => 'bna', 'C06p11490' => 'bna', 'C07p02820' => 'bna', 'C07p17180' => 'bna', 'C07p29440' => 'bna', 'C07p63730' => 'bna', 'C09p39260' => 'bna', 'CAN.G1164.34' => 'can', 'CAN.G1164.39' => 'can', 'CAN.G1530.3' => 'can', 'CAN.G162.61' => 'can', 'CAN.G176.6' => 'can', 'CAN.G289.49' => 'can', 'CAN.G370.21' => 'can', 'CAN.G370.22' => 'can', 'CAN.G371.117' => 'can', 'CAN.G58.37' => 'can', 'CAN.G588.98' => 'can', 'CANSAT21G2266' => 'cansat', 'CANSAT25G2799' => 'cansat', 'CANSAT35G0862' => 'cansat', 'CANSAT35G1704' => 'cansat', 'CANSAT35G1760' => 'cansat', 'CANSAT56G3971' => 'cansat', 'CANSAT56G4116' => 'cansat', 'CANSAT80G1259' => 'cansat', 'CARHR027730' => 'chi', 'CARHR033880' => 'chi', 'CARHR043270' => 'chi', 'CARHR145330' => 'chi', 'CARHR145340' => 'chi', 'CARHR175570' => 'chi', 'CARHR181570' => 'chi', 'CARHR258470' => 'chi', 'CARHR260490' => 'chi', 'CARHR294220' => 'chi', 'Carub.0001s2668' => 'cru', 'Carub.0001s3257' => 'cru', 'Carub.0001s4220' => 'cru', 'Carub.0005s0179' => 'cru', 'Carub.0006s2807' => 'cru', 'Carub.0007s0039' => 'cru', 'Carub.0008s0169' => 'cru', 'Carub.0008s0636' => 'cru', 'Ca_00338_v3' => 'car', 'Ca_00542_v3' => 'car', 'Ca_01844_v3' => 'car', 'Ca_10611_v3' => 'car', 'Ca_13326_v3' => 'car', 'Ca_17944_v3' => 'car', 'Ca_18546_v3' => 'car', 'Ca_24219_v3' => 'car', 'Ca_29972_v3' => 'car', 'CBR_g3681' => 'cbr', 'CBR_g40021' => 'cbr', 'Cc01_g08140' => 'ccan', 'Cc02_g13410' => 'ccan', 'Cc02_g37480' => 'ccan', 'Cc05_g12030' => 'ccan', 'Cc09_g03370' => 'ccan', 'Cc09_g10300' => 'ccan', 'Cc10_g03530' => 'ccan', 'Cc10_g11380' => 'ccan', 'CDE01G0176' => 'cde', 'CDE02G0675' => 'cde', 'CDE02G0942' => 'cde', 'CDE02G1153' => 'cde', 'CDE02G4177' => 'cde', 'CDE04G2117' => 'cde', 'CDE04G2736' => 'cde', 'CDE08G1161' => 'cde', 'CDE09G1238' => 'cde', 'Cfa000467' => 'cfa', 'Cfa000947' => 'cfa', 'Cfa004969' => 'cfa', 'Cfa005284' => 'cfa', 'Cfa008993' => 'cfa', 'Cfa018187' => 'cfa', 'Cfa018454' => 'cfa', 'Cfa020585' => 'cfa', 'Ciclev10000424m.g' => 'ccl', 'Ciclev10003605m.g' => 'ccl', 'Ciclev10007828m.g' => 'ccl', 'Ciclev10014620m.g' => 'ccl', 'Ciclev10015169m.g' => 'ccl', 'Ciclev10018291m.g' => 'ccl', 'Ciclev10028256m.g' => 'ccl', 'Ciclev10033822m.g' => 'ccl', 'CiPaw.05G060300' => 'cil', 'CiPaw.05G085000' => 'cil', 'CiPaw.06G083700' => 'cil', 'CiPaw.06G120300' => 'cil', 'CiPaw.09G060500' => 'cil', 'CiPaw.09G123800' => 'cil', 'CiPaw.11G169700' => 'cil', 'CiPaw.12G118300' => 'cil', 'CiPaw.15G071000' => 'cil', 'CiPaw.15G081900' => 'cil', 'ClCG01G024610' => 'cla', 'ClCG03G006070' => 'cla', 'ClCG05G019250' => 'cla', 'ClCG09G009500' => 'cla', 'ClCG11G008200' => 'cla', 'ClCG11G018080' => 'cla', 'COL.COLO4_17373' => 'col', 'COL.COLO4_22994' => 'col', 'COL.COLO4_26389' => 'col', 'COL.COLO4_27170' => 'col', 'COL.COLO4_31074' => 'col', 'COL.COLO4_31465' => 'col', 'COL.COLO4_36438' => 'col', 'COL.COLO4_36439' => 'col', 'Cpa.g.c38781' => 'cpa', 'Cpa.g.sc128.12' => 'cpa', 'Cpa.g.sc166.7' => 'cpa', 'Cpa.g.sc166.8' => 'cpa', 'Cpa.g.sc20.111' => 'cpa', 'Cpa.g.sc27.31' => 'cpa', 'Cpa.g.sc64.36' => 'cpa', 'Cpa.g.sc64.37' => 'cpa', 'Cpa.g.sc66.49' => 'cpa', 'Cpa.g.sc80.64' => 'cpa', 'CsaV3_1G012320' => 'csa', 'CsaV3_2G008480' => 'csa', 'CsaV3_2G033450' => 'csa', 'CsaV3_3G044830' => 'csa', 'CsaV3_4G033710' => 'csa', 'CsaV3_6G051730' => 'csa', 'CsaV3_7G025350' => 'csa', 'CSS0001067' => 'camsi', 'CSS0005996' => 'camsi', 'CSS0006590' => 'camsi', 'CSS0009673' => 'camsi', 'CSS0010201' => 'camsi', 'CSS0010549' => 'camsi', 'CSS0011364' => 'camsi', 'CSS0014473' => 'camsi', 'CSS0014961' => 'camsi', 'CSS0020191' => 'camsi', 'CSS0021165' => 'camsi', 'CSS0022306' => 'camsi', 'CSS0030591' => 'camsi', 'CSS0030696' => 'camsi', 'CSS0032653' => 'camsi', 'CSS0037487' => 'camsi', 'CSS0041102' => 'camsi', 'CSS0041261' => 'camsi', 'CSS0046246' => 'camsi', 'CSS0049256' => 'camsi', 'DCAR_004075' => 'dca', 'DCAR_011538' => 'dca', 'DCAR_019553' => 'dca', 'DCAR_020952' => 'dca', 'DCAR_021739' => 'dca', 'DCAR_027407' => 'dca', 'DCAR_027913' => 'dca', 'DCAR_028066' => 'dca', 'Dinv05899' => 'din', 'Dinv07563' => 'din', 'Dinv08010' => 'din', 'Dinv14125' => 'din', 'Dinv20172' => 'din', 'Dinv30743' => 'din', 'Dinv31229' => 'din', 'Dinv34162' => 'din', 'Dinv36028' => 'din', 'Dinv39368' => 'din', 'Dinv40565' => 'din', 'Dinv41706' => 'din', 'Duzib052G0089' => 'dzi', 'Duzib116G0641' => 'dzi', 'Duzib132G0069' => 'dzi', 'Duzib132G1219' => 'dzi', 'Duzib147G0278' => 'dzi', 'Duzib160G0480' => 'dzi', 'Duzib170G0661' => 'dzi', 'Duzib177G0591' => 'dzi', 'Duzib187G1353' => 'dzi', 'Duzib192G0858' => 'dzi', 'Duzib192G0883' => 'dzi', 'Duzib213G0506' => 'dzi', 'Duzib235G0289' => 'dzi', 'Duzib251G0422' => 'dzi', 'ECA232G3898' => 'eca', 'ECA233G5950' => 'eca', 'ECA234G1699' => 'eca', 'ECA234G2421' => 'eca', 'ECA236G0426' => 'eca', 'ECA236G4331' => 'eca', 'ECA248G2573' => 'eca', 'EL10Ac1g00077' => 'bvu', 'EL10Ac1g01746' => 'bvu', 'EL10Ac2g03464' => 'bvu', 'EL10Ac4g08176' => 'bvu', 'EL10Ac7g17521' => 'bvu', 'EL10Ac8g20386' => 'bvu', 'EL10Ac9g21343' => 'bvu', 'EL10Ac9g22688' => 'bvu', 'Eucgr.B03434' => 'egr', 'Eucgr.D00618' => 'egr', 'Eucgr.E02395' => 'egr', 'Eucgr.F01129' => 'egr', 'Eucgr.F02622' => 'egr', 'Eucgr.F04207' => 'egr', 'FAN01G0570' => 'fan', 'FAN03G3351' => 'fan', 'FAN06G3702' => 'fan', 'FAN07G2149' => 'fan', 'FAN10G3758' => 'fan', 'FAN11G1170' => 'fan', 'FAN11G2050' => 'fan', 'FAN11G2724' => 'fan', 'FAN12G1700' => 'fan', 'FAN12G2028' => 'fan', 'FAN15G1160' => 'fan', 'FAN15G3063' => 'fan', 'FAN16G2540' => 'fan', 'FAN16G3077' => 'fan', 'FAN16G3624' => 'fan', 'FAN17G0221' => 'fan', 'FAN20G2492' => 'fan', 'FAN20G2905' => 'fan', 'FAN21G0548' => 'fan', 'FAN21G1300' => 'fan', 'FAN22G0077' => 'fan', 'FAN22G1315' => 'fan', 'FAN24G1280' => 'fan', 'FAN24G1445' => 'fan', 'FAN24G3527' => 'fan', 'FAN25G0464' => 'fan', 'FAN25G2885' => 'fan', 'FAN25G3270' => 'fan', 'FAN27G1101' => 'fan', 'FAN27G2846' => 'fan', 'FAN27G3524' => 'fan', 'FvH4_2g11770' => 'fve', 'FvH4_2g15630' => 'fve', 'FvH4_3g05570' => 'fve', 'FvH4_3g09110' => 'fve', 'FvH4_3g19940' => 'fve', 'FvH4_4g04821' => 'fve', 'FvH4_4g31480' => 'fve', 'FvH4_7g01740' => 'fve', 'Glyma.05G130400' => 'gma', 'Glyma.05G156400' => 'gma', 'Glyma.07G197000' => 'gma', 'Glyma.08G085151' => 'gma', 'Glyma.08G114500' => 'gma', 'Glyma.08G300400' => 'gma', 'Glyma.10G215800' => 'gma', 'Glyma.12G224400' => 'gma', 'Glyma.13G179300' => 'gma', 'Glyma.13G218151' => 'gma', 'Glyma.13G238800' => 'gma', 'Glyma.13G276900' => 'gma', 'Glyma.14G078200' => 'gma', 'Glyma.15G074500' => 'gma', 'Glyma.15G094100' => 'gma', 'Glyma.17G247200' => 'gma', 'Glyma.18G120100' => 'gma', 'Glyma.20G176000' => 'gma', 'Gohir.A01G063600' => 'ghi', 'Gohir.A01G170301' => 'ghi', 'Gohir.A02G060500' => 'ghi', 'Gohir.A05G133850' => 'ghi', 'Gohir.A05G161400' => 'ghi', 'Gohir.A06G012900' => 'ghi', 'Gohir.A06G035901' => 'ghi', 'Gohir.A06G127100' => 'ghi', 'Gohir.A06G210500' => 'ghi', 'Gohir.A08G008650' => 'ghi', 'Gohir.A09G072700' => 'ghi', 'Gohir.A09G088301' => 'ghi', 'Gohir.A10G040600' => 'ghi', 'Gohir.A12G036300' => 'ghi', 'Gohir.A12G143350' => 'ghi', 'Gohir.A12G165500' => 'ghi', 'Gohir.A13G145700' => 'ghi', 'Gohir.D01G050000' => 'ghi', 'Gohir.D01G051366' => 'ghi', 'Gohir.D01G161350' => 'ghi', 'Gohir.D02G065900' => 'ghi', 'Gohir.D05G164200' => 'ghi', 'Gohir.D05G355500' => 'ghi', 'Gohir.D06G010400' => 'ghi', 'Gohir.D06G111250' => 'ghi', 'Gohir.D06G132000' => 'ghi', 'Gohir.D06G210500' => 'ghi', 'Gohir.D07G165675' => 'ghi', 'Gohir.D08G062240' => 'ghi', 'Gohir.D08G086101' => 'ghi', 'Gohir.D08G138060' => 'ghi', 'Gohir.D09G072300' => 'ghi', 'Gohir.D10G041400' => 'ghi', 'Gohir.D11G191020' => 'ghi', 'Gohir.D11G212066' => 'ghi', 'Gohir.D12G036300' => 'ghi', 'Gohir.D12G168600' => 'ghi', 'Gohir.D13G150600' => 'ghi', 'Gorai.001G057300' => 'gra', 'Gorai.002G069900' => 'gra', 'Gorai.002G200000' => 'gra', 'Gorai.003G067600' => 'gra', 'Gorai.005G074800' => 'gra', 'Gorai.006G087300' => 'gra', 'Gorai.008G037500' => 'gra', 'Gorai.008G181400' => 'gra', 'Gorai.009G169400' => 'gra', 'Gorai.009G387900' => 'gra', 'Gorai.010G013300' => 'gra', 'Gorai.010G153800' => 'gra', 'Gorai.010G255800' => 'gra', 'Gorai.011G043700' => 'gra', 'Gorai.011G198900' => 'gra', 'Gorai.013G168400' => 'gra', 'GSVIVG01005212001' => 'vvi', 'GSVIVG01006163001' => 'vvi', 'GSVIVG01009625001' => 'vvi', 'GSVIVG01014338001' => 'vvi', 'GSVIVG01020005001' => 'vvi', 'GSVIVG01021450001' => 'vvi', 'GSVIVG01023975001' => 'vvi', 'GSVIVG01034490001' => 'vvi', 'HanXRQChr04g0112071' => 'han', 'HanXRQChr05g0131151' => 'han', 'HanXRQChr09g0262371' => 'han', 'HanXRQChr09g0268401' => 'han', 'HanXRQChr10g0279241' => 'han', 'HanXRQChr10g0297961' => 'han', 'HanXRQChr11g0326231' => 'han', 'HanXRQChr11g0328471' => 'han', 'HanXRQChr16g0507941' => 'han', 'HanXRQChr17g0560211' => 'han', 'Haze_02108' => 'cav', 'Haze_02428' => 'cav', 'Haze_05593' => 'cav', 'Haze_06448' => 'cav', 'Haze_09427' => 'cav', 'Haze_12022' => 'cav', 'Haze_17612' => 'cav', 'Haze_17928' => 'cav', 'Hma1.2p1_0032F.1_g019250' => 'hma', 'Hma1.2p1_0163F.1_g072690' => 'hma', 'Hma1.2p1_0265F.1_g106710' => 'hma', 'Hma1.2p1_0286F.1_g113970' => 'hma', 'Hma1.2p1_0363F.1_g136640' => 'hma', 'Hma1.2p1_0584F.1_g183470' => 'hma', 'Hma1.2p1_0885F.1_g232570' => 'hma', 'HPP92_006022' => 'vpl', 'HPP92_007320' => 'vpl', 'HPP92_011521' => 'vpl', 'HPP92_019387' => 'vpl', 'HPP92_024038' => 'vpl', 'Hund05891' => 'sun', 'Hund06450' => 'sun', 'Hund12053' => 'sun', 'Hund16800' => 'sun', 'Hund21222' => 'sun', 'Hund22896' => 'sun', 'Hund23746' => 'sun', 'Hund27083' => 'sun', 'Lalb_Chr02g0141831' => 'lal', 'Lalb_Chr02g0141841' => 'lal', 'Lalb_Chr05g0220411' => 'lal', 'Lalb_Chr06g0162081' => 'lal', 'Lalb_Chr09g0327651' => 'lal', 'Lalb_Chr13g0295051' => 'lal', 'Lalb_Chr15g0086801' => 'lal', 'Lalb_Chr16g0383781' => 'lal', 'Lalb_Chr16g0383791' => 'lal', 'Lalb_Chr18g0055441' => 'lal', 'Lalb_Chr18g0059611' => 'lal', 'Lalb_Chr20g0109661' => 'lal', 'Lalb_Chr20g0109831' => 'lal', 'Lalb_Chr20g0121871' => 'lal', 'Lalb_Chr22g0355361' => 'lal', 'Lalb_Chr25g0286371' => 'lal', 'Lj1A1187G43' => 'lonja', 'Lj1A1205T50' => 'lonja', 'Lj1A800G33' => 'lonja', 'Lj1C1187T7' => 'lonja', 'Lj1C843T11' => 'lonja', 'Lj1g0010940' => 'lja', 'Lj2A288T69' => 'lonja', 'Lj3g0024276' => 'lja', 'Lj4A47T76' => 'lonja', 'Lj4g0005805' => 'lja', 'Lj4g0006097' => 'lja', 'Lj4g0008528' => 'lja', 'Lj4g0024907' => 'lja', 'Lj5g0012472' => 'lja', 'Lj5g0018648' => 'lja', 'Lj6C789G1' => 'lonja', 'Lj6g0004000' => 'lja', 'Lj7A292G67' => 'lonja', 'Lj7A292T64' => 'lonja', 'Lj9A400T58' => 'lonja', 'Lsat_1_v5_gn_1_126181' => 'lsa', 'Lsat_1_v5_gn_4_123041' => 'lsa', 'Lsat_1_v5_gn_4_133620' => 'lsa', 'Lsat_1_v5_gn_4_53221' => 'lsa', 'Lsat_1_v5_gn_4_71961' => 'lsa', 'Lsat_1_v5_gn_7_105241' => 'lsa', 'Lsat_1_v5_gn_7_21361' => 'lsa', 'Lsat_1_v5_gn_7_28860' => 'lsa', 'Lsat_1_v5_gn_7_31260' => 'lsa', 'Lsat_1_v5_gn_8_52801' => 'lsa', 'Manes.02G191400' => 'mes', 'Manes.03G110100' => 'mes', 'Manes.04G071100' => 'mes', 'Manes.05G100500' => 'mes', 'Manes.05G164700' => 'mes', 'Manes.15G087000' => 'mes', 'Manes.15G121500' => 'mes', 'Manes.16G028300' => 'mes', 'Manes.17G046100' => 'mes', 'Manes.17G069800' => 'mes', 'Manes.18G100500' => 'mes', 'Mapoly0002s0109' => 'mpo', 'Mapoly0024s0007' => 'mpo', 'Mapoly0089s0032' => 'mpo', 'MBI04_g42241_MAGBIO' => 'mbi', 'MBI05_g11988_MAGBIO' => 'mbi', 'MBI05_g35452_MAGBIO' => 'mbi', 'MBI07_g30179_MAGBIO' => 'mbi', 'MBI07_g35859_MAGBIO' => 'mbi', 'MBI07_g35860_MAGBIO' => 'mbi', 'MBI07_g37166_MAGBIO' => 'mbi', 'MBI08_g18172_MAGBIO' => 'mbi', 'MBI09_g08441_MAGBIO' => 'mbi', 'MBI13_g01676_MAGBIO' => 'mbi', 'MBI14_g42955_MAGBIO' => 'mbi', 'MBI16_g13161_MAGBIO' => 'mbi', 'MBI17_g27204_MAGBIO' => 'mbi', 'MBI19_g21595_MAGBIO' => 'mbi', 'MD00G1148400' => 'mdo', 'MD02G1301200' => 'mdo', 'MD03G1227800' => 'mdo', 'MD05G1041100' => 'mdo', 'MD05G1124800' => 'mdo', 'MD05G1284000' => 'mdo', 'MD05G1338800' => 'mdo', 'MD05G1338900' => 'mdo', 'MD07G1022800' => 'mdo', 'MD10G1047500' => 'mdo', 'MD10G1127500' => 'mdo', 'MD10G1262300' => 'mdo', 'MD10G1293800' => 'mdo', 'MD16G1074300' => 'mdo', 'Medtr1g021670' => 'mtr', 'Medtr1g096320' => 'mtr', 'Medtr2g013690' => 'mtr', 'Medtr2g019450' => 'mtr', 'Medtr2g085170' => 'mtr', 'Medtr4g088785' => 'mtr', 'Medtr8g055930' => 'mtr', 'Medtr8g085850' => 'mtr', 'MELO3C002605.2' => 'cme', 'MELO3C003891.2' => 'cme', 'MELO3C004012.2' => 'cme', 'MELO3C007134.2' => 'cme', 'MELO3C008118.2' => 'cme', 'MELO3C016700.2' => 'cme', 'MELO3C024127.2' => 'cme', 'MELO3C033361.2' => 'cme', 'MELO3C033362.2' => 'cme', 'Migut.C00430' => 'egut', 'Migut.C01246' => 'egut', 'Migut.E00101' => 'egut', 'Migut.H01486' => 'egut', 'Migut.H01939' => 'egut', 'Migut.K00360' => 'egut', 'Migut.M00910' => 'egut', 'Migut.M01139' => 'egut', 'Migut.N02677' => 'egut', 'MSTRG.13252' => 'ama', 'MSTRG.14701' => 'ama', 'MSTRG.1521' => 'ama', 'MSTRG.15884' => 'ama', 'MSTRG.16242' => 'ama', 'MSTRG.22285' => 'ama', 'MSTRG.22444' => 'ama', 'MSTRG.2349' => 'ama', 'MSTRG.26308' => 'ama', 'MSTRG.28296' => 'ama', 'MSTRG.9895' => 'ama', 'Nitab4.5_0000110g0060' => 'nta', 'Nitab4.5_0000420g0130' => 'nta', 'Nitab4.5_0000422g0030' => 'nta', 'Nitab4.5_0000560g0180' => 'nta', 'Nitab4.5_0000703g0100' => 'nta', 'Nitab4.5_0000786g0200' => 'nta', 'Nitab4.5_0001336g0020' => 'nta', 'Nitab4.5_0001796g0030' => 'nta', 'Nitab4.5_0003348g0060' => 'nta', 'Nitab4.5_0003698g0040' => 'nta', 'Nitab4.5_0003942g0090' => 'nta', 'Nitab4.5_0004775g0070' => 'nta', 'Nitab4.5_0004864g0030' => 'nta', 'Nitab4.5_0005615g0020' => 'nta', 'Nitab4.5_0009288g0030' => 'nta', 'Nitab4.5_0009341g0010' => 'nta', 'Nitab4.5_0009535g0010' => 'nta', 'Nn1g03995' => 'nnu', 'Nn1g04100' => 'nnu', 'Nn1g06530' => 'nnu', 'Nn3g16404' => 'nnu', 'Nn3g17212' => 'nnu', 'Nn3g20776' => 'nnu', 'Nn3g21923' => 'nnu', 'Nn5g27737' => 'nnu', 'Nn5g29461' => 'nnu', 'Nn7g38355' => 'nnu', 'Nn8g39873' => 'nnu', 'Oeu000548.2' => 'oeu', 'Oeu004672.1' => 'oeu', 'Oeu015605.2' => 'oeu', 'Oeu016092.1' => 'oeu', 'Oeu017879.3' => 'oeu', 'Oeu024910.1' => 'oeu', 'Oeu028965.1' => 'oeu', 'Oeu031269.1' => 'oeu', 'Oeu031270.1' => 'oeu', 'Oeu032535.1' => 'oeu', 'Oeu034151.1' => 'oeu', 'Oeu034152.1' => 'oeu', 'Oeu034588.2' => 'oeu', 'Oeu050846.1' => 'oeu', 'Oeu050849.2' => 'oeu', 'Oeu051063.2' => 'oeu', 'Oeu052368.1' => 'oeu', 'Oeu052370.1' => 'oeu', 'Os01g0210400' => 'osa', 'Os01g0304300' => 'osa', 'Os01g0749100' => 'osa', 'Os02g0745800' => 'osa', 'Os03g0769050' => 'osa', 'Os05g0531500' => 'osa', 'Os06g0724300' => 'osa', 'Os11g0198100' => 'osa', 'Peaxi162Scf00069g01425' => 'pax', 'Peaxi162Scf00280g00811' => 'pax', 'Peaxi162Scf00310g00615' => 'pax', 'Peaxi162Scf00362g00542' => 'pax', 'Peaxi162Scf00461g00310' => 'pax', 'Peaxi162Scf00530g00118' => 'pax', 'Peaxi162Scf00541g00057' => 'pax', 'Peaxi162Scf00661g00017' => 'pax', 'Peaxi162Scf00926g00027' => 'pax', 'Peaxi162Scf01064g00263' => 'pax', 'Peaxi162Scf01211g00135' => 'pax', 'PGR004G2336' => 'pgr', 'PGR042G0327' => 'pgr', 'PGR042G1957' => 'pgr', 'PGR042G2003' => 'pgr', 'PGR042G3929' => 'pgr', 'PGR083G1137' => 'pgr', 'PGR083G1364' => 'pgr', 'PGSC0003DMG400003381' => 'stu', 'PGSC0003DMG400003417' => 'stu', 'PGSC0003DMG400008981' => 'stu', 'PGSC0003DMG400012417' => 'stu', 'PGSC0003DMG400012823' => 'stu', 'PGSC0003DMG400016885' => 'stu', 'PGSC0003DMG400022812' => 'stu', 'PGSC0003DMG400029726' => 'stu', 'PGSC0003DMG401009243' => 'stu', 'PGSC0003DMG401031505' => 'stu', 'PGSC0003DMG402031505' => 'stu', 'Phvul.001G017600' => 'pvu', 'Phvul.002G193500' => 'pvu', 'Phvul.002G228900' => 'pvu', 'Phvul.002G236800' => 'pvu', 'Phvul.003G049500' => 'pvu', 'Phvul.005G072000' => 'pvu', 'Phvul.006G164800' => 'pvu', 'Phvul.006G185100' => 'pvu', 'Phvul.007G090000' => 'pvu', 'Potri.001G399800' => 'ptr', 'Potri.002G149900' => 'ptr', 'Potri.004G044100' => 'ptr', 'Potri.004G177600' => 'ptr', 'Potri.009G138000' => 'ptr', 'Potri.010G094000' => 'ptr', 'Potri.011G053000' => 'ptr', 'Potri.011G119300' => 'ptr', 'Potri.013G113700' => 'ptr', 'Potri.018G107800' => 'ptr', 'Potri.019G084100' => 'ptr', 'Pp3c14_23720' => 'ppa', 'Pp3c16_6340' => 'ppa', 'Pp3c23_13420' => 'ppa', 'Pp3c24_2740' => 'ppa', 'Pp3c25_860' => 'ppa', 'Pp3c8_21750' => 'ppa', 'Prupe.1G273000' => 'ppe', 'Prupe.1G273700' => 'ppe', 'Prupe.1G274100' => 'ppe', 'Prupe.2G023300' => 'ppe', 'Prupe.4G048000' => 'ppe', 'Prupe.4G080400' => 'ppe', 'Prupe.4G181200' => 'ppe', 'Prupe.8G056900' => 'ppe', 'Prupe.8G168700' => 'ppe', 'Psat1g189080' => 'psa', 'Psat1g204760' => 'psa', 'Psat4g175560' => 'psa', 'Psat4g177720' => 'psa', 'Psat5g244240' => 'psa', 'Psat6g010720' => 'psa', 'Psat6g187200' => 'psa', 'Psat7g072040' => 'psa', 'PSO017G3501' => 'pso', 'PSO063G2148' => 'pso', 'PSO063G5608' => 'pso', 'PSO210G6392' => 'pso', 'PSO541G2319' => 'pso', 'PSO541G2836' => 'pso', 'PSO541G4012' => 'pso', 'PSO541G6253' => 'pso', 'PSO675G0580' => 'pso', 'PSO675G0856' => 'pso', 'PSO675G5635' => 'pso', 'PSO675G9157' => 'pso', 'PSO832G1660' => 'pso', 'PSO832G1969' => 'pso', 'QL02p007186' => 'qlo', 'QL02p033904' => 'qlo', 'QL03p064391' => 'qlo', 'QL05p040593' => 'qlo', 'QL05p058242' => 'qlo', 'QL08p021825' => 'qlo', 'QL11p004981' => 'qlo', 'RcHm_v2.0_Chr1g0318301' => 'rch', 'RcHm_v2.0_Chr4g0418501' => 'rch', 'RcHm_v2.0_Chr4g0439971' => 'rch', 'RcHm_v2.0_Chr5g0008541' => 'rch', 'RcHm_v2.0_Chr5g0014101' => 'rch', 'RcHm_v2.0_Chr5g0014131' => 'rch', 'RcHm_v2.0_Chr5g0033621' => 'rch', 'RcHm_v2.0_Chr6g0272041' => 'rch', 'RcHm_v2.0_Chr6g0278831' => 'rch', 'Rhsim02G0130400' => 'rsi', 'Rhsim02G0171100' => 'rsi', 'Rhsim05G0053000' => 'rsi', 'Rhsim05G0053100' => 'rsi', 'Rhsim06G0096500' => 'rsi', 'Rhsim06G0096600' => 'rsi', 'Rhsim06G0199100' => 'rsi', 'Rhsim12G0062300' => 'rsi', 'Rhsim12G0062800' => 'rsi', 'Sabra02G0118600' => 'sbr', 'Sabra04G0027300' => 'sbr', 'Sabra04G0119500' => 'sbr', 'Sabra08G0112500' => 'sbr', 'Sabra11G0036800' => 'sbr', 'Sabra11G0103800' => 'sbr', 'Sabra13G0096300' => 'sbr', 'Sabra16G0262300' => 'sbr', 'Sabra18G0091700' => 'sbr', 'Sabra19G0095400' => 'sbr', 'SalBow6G3080' => 'sbo', 'SalBow7G1157' => 'sbo', 'SalBow7G2123' => 'sbo', 'SalBow7G2285' => 'sbo', 'SalBow7G3537' => 'sbo', 'SalBow8G2947' => 'sbo', 'SalBow8G4463' => 'sbo', 'SalBow8G5466' => 'sbo', 'Sc01g0001750' => 'sci', 'Sc02g0006640' => 'sci', 'Sc02g0006670' => 'sci', 'Sc04g0008220' => 'sci', 'Sc05g0006190' => 'sci', 'Sc08g0002760' => 'sci', 'Sc17g0006170' => 'sci', 'Sc22g0002050' => 'sci', 'Sc23g0001190' => 'sci', 'Sc24g0000980' => 'sci', 'Sed0006245' => 'sed', 'Sed0007543' => 'sed', 'Sed0009411' => 'sed', 'Sed0010765' => 'sed', 'Sed0012944' => 'sed', 'Sed0014682' => 'sed', 'Sed0016174' => 'sed', 'Sed0016796' => 'sed', 'Sed0020317' => 'sed', 'Sed0021467' => 'sed', 'SEGI_01316' => 'sgi', 'SEGI_03374' => 'sgi', 'SEGI_16265' => 'sgi', 'SEGI_18569' => 'sgi', 'SEGI_20351' => 'sgi', 'SEGI_26395' => 'sgi', 'SEGI_29469' => 'sgi', 'SEGI_34771' => 'sgi', 'SEGI_36769' => 'sgi', 'SEGI_37139' => 'sgi', 'SGA_v2.0_scaffold100G29687' => 'sas', 'SGA_v2.0_scaffold118G32472' => 'sas', 'SGA_v2.0_scaffold14G07051' => 'sas', 'SGA_v2.0_scaffold183G39845' => 'sas', 'SGA_v2.0_scaffold1G00174' => 'sas', 'SGA_v2.0_scaffold22G09714' => 'sas', 'SGA_v2.0_scaffold333G48992' => 'sas', 'SGA_v2.0_scaffold46G17491' => 'sas', 'SGA_v2.0_scaffold49G18294' => 'sas', 'SGA_v2.0_scaffold63G21658' => 'sas', 'SHI01741' => 'shi', 'SHI05771' => 'shi', 'SHI18077' => 'shi', 'SHI20525' => 'shi', 'SHI20527' => 'shi', 'SHI20528' => 'shi', 'SMO172G0185' => 'smo', 'SMO198G0020' => 'smo', 'SMO351G0006' => 'smo', 'SMO356G0118' => 'smo', 'SMO358G0296' => 'smo', 'SMO367G0079' => 'smo', 'SMO367G1277' => 'smo', 'Solyc01g014220.3' => 'sly', 'Solyc01g111770.2' => 'sly', 'Solyc02g078180.3' => 'sly', 'Solyc03g006430.3' => 'sly', 'Solyc03g006456.1' => 'sly', 'Solyc03g079860.2' => 'sly', 'Solyc04g079770.3' => 'sly', 'Solyc05g007430.4' => 'sly', 'Solyc07g063150.3' => 'sly', 'Solyc08g016620.3' => 'sly', 'Solyc09g057590.3' => 'sly', 'Solyc09g057600.1' => 'sly', 'Solyc10g009050.3' => 'sly', 'Solyc11g017420.2' => 'sly', 'Sopen01g053810' => 'spe', 'Sopen02g023040' => 'spe', 'Sopen03g002440' => 'spe', 'Sopen04g033350' => 'spe', 'Sopen05g003310' => 'spe', 'Sopen07g004050' => 'spe', 'Sopen07g031340' => 'spe', 'Sopen08g006990' => 'spe', 'Sopen10g004830' => 'spe', 'Sopen11g009370' => 'spe', 'Sp1g24450' => 'spa', 'Sp1g29670' => 'spa', 'Sp1g39600' => 'spa', 'Sp2g11080' => 'spa', 'Sp2g13970' => 'spa', 'Sp4g16130' => 'spa', 'Sp6g13080' => 'spa', 'Sp7g37270' => 'spa', 'TAR371G0065' => 'tar', 'TAR376G0340' => 'tar', 'TAR376G0435' => 'tar', 'TAR381G0002' => 'tar', 'TAR381G1236' => 'tar', 'TAR624G0055' => 'tar', 'TAR624G0324' => 'tar', 'TAR624G0696' => 'tar', 'TAR624G0906' => 'tar', 'TAR625G0107' => 'tar', 'TAR626G0015' => 'tar', 'TAR626G1356' => 'tar', 'TAR627G0888' => 'tar', 'TAR628G0399' => 'tar', 'TAR628G1327' => 'tar', 'TAR629G2831' => 'tar', 'TAR629G2874' => 'tar', 'TAR633G1432' => 'tar', 'TAR633G2771' => 'tar', 'THA.LOC104803394' => 'tha', 'THA.LOC104805153' => 'tha', 'THA.LOC104806784' => 'tha', 'THA.LOC104810473' => 'tha', 'THA.LOC104813100' => 'tha', 'THA.LOC104814215' => 'tha', 'THA.LOC104815554' => 'tha', 'THA.LOC104820544' => 'tha', 'THA.LOC104824754' => 'tha', 'THA.LOC104827717' => 'tha', 'Thecc.02G031400' => 'tca', 'Thecc.02G055900' => 'tca', 'Thecc.02G350800' => 'tca', 'Thecc.06G150900' => 'tca', 'Thecc.06G186600' => 'tca', 'Thecc.07G089600' => 'tca', 'Thecc.08G020400' => 'tca', 'Thecc.08G182100' => 'tca', 'Thhalv10000873m.g' => 'esa', 'Thhalv10004185m.g' => 'esa', 'Thhalv10006981m.g' => 'esa', 'Thhalv10007204m.g' => 'esa', 'Thhalv10011374m.g' => 'esa', 'Thhalv10013482m.g' => 'esa', 'Thhalv10017801m.g' => 'esa', 'Thhalv10024983m.g' => 'esa', 'TPR.G12072' => 'tpr', 'TPR.G15769' => 'tpr', 'TPR.G16504' => 'tpr', 'TPR.G16506' => 'tpr', 'TPR.G24345' => 'tpr', 'TPR.G26666' => 'tpr', 'TPR.G27320' => 'tpr', 'TPR.G31819' => 'tpr', 'TPR.G38879' => 'tpr', 'TPR.G39015' => 'tpr', 'TPR.G8819' => 'tpr', 'TWI09G0924' => 'twi', 'TWI12G0811' => 'twi', 'TWI12G1294' => 'twi', 'TWI31G0150' => 'twi', 'TWI36G1262' => 'twi', 'TWI38G1287' => 'twi', 'TWI38G1633' => 'twi', 'TWI38G1982' => 'twi', 'TWI39G0116' => 'twi', 'TWI60G1011' => 'twi', 'TWI63G0171' => 'twi', 'TWI73G0839' => 'twi', 'TWI79G1511' => 'twi', 'unitig_0.g915' => 'ugi', 'unitig_0.g916' => 'ugi', 'unitig_21.g20219' => 'ugi', 'unitig_21.g20416' => 'ugi', 'unitig_578.g16132' => 'ugi', 'unitig_578.g16718' => 'ugi', 'unitig_62.g23481' => 'ugi', 'unitig_744.g24535' => 'ugi', 'unitig_749.g13525' => 'ugi', 'vmacro01248' => 'vma', 'vmacro02290' => 'vma', 'vmacro10946' => 'vma', 'vmacro11865' => 'vma', 'vmacro12493' => 'vma', 'vmacro17322' => 'vma', 'vmacro21599' => 'vma', 'vmacro23041' => 'vma', 'VMungo0251G0004' => 'vmu', 'VMungo0251G2639' => 'vmu', 'VMungo0251G2967' => 'vmu', 'VMungo0540G0864' => 'vmu', 'VMungo0540G1569' => 'vmu', 'VMungo0647G0317' => 'vmu', 'VMungo0720G1373' => 'vmu', 'VMungo0720G1508' => 'vmu', 'VMungo1080G0485' => 'vmu', 'VMungo1215G3177' => 'vmu', 'Zm00001eb112600' => 'zma', 'Zm00001eb120220' => 'zma', 'Zm00001eb153240' => 'zma', 'Zm00001eb168880' => 'zma', 'Zm00001eb213920' => 'zma', 'Zm00001eb228280' => 'zma', 'Zm00001eb254580' => 'zma', 'Zm00001eb272180' => 'zma', 'Zm00001eb293190' => 'zma', 'Zm00001eb322930' => 'zma', 'Zm00001eb353360' => 'zma', 'Zm00001eb353390' => 'zma', 'Zm00001eb353430' => 'zma', 'Zm00001eb353440' => 'zma', 'Zm00001eb353780' => 'zma' ) $gf_id = 'HOM05D000499' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000499' ) $data_identifier = 'HOM05D000499' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 29, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 12, 'amhyb' => (int) 8, 'aly' => (int) 12, 'aox' => (int) 9, 'arhy' => (int) 26, 'ath' => (int) 8, 'atr' => (int) 7, 'acertr' => (int) 10, 'cqu' => (int) 15, 'bca' => (int) 29, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 11, 'cansat' => (int) 8, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 9, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 8, 'cpa' => (int) 10, 'csa' => (int) 7, 'camsi' => (int) 20, 'dca' => (int) 8, 'din' => (int) 12, 'dzi' => (int) 14, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 6, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 38, 'gra' => (int) 16, 'vvi' => (int) 8, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 5, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 11, 'lja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 11, 'mpo' => (int) 3, 'mbi' => (int) 14, 'mdo' => (int) 14, 'mtr' => (int) 8, 'cme' => (int) 9, 'egut' => (int) 9, 'ama' => (int) 11, 'nta' => (int) 17, 'nnu' => (int) 11, 'oeu' => (int) 18, 'osa' => (int) 8, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 6, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 9, 'rsi' => (int) 9, 'sbr' => (int) 10, 'sbo' => (int) 8, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 10, 'sas' => (int) 10, 'shi' => (int) 6, 'smo' => (int) 7, 'sly' => (int) 14, 'spe' => (int) 10, 'spa' => (int) 8, 'tar' => (int) 19, 'tha' => (int) 10, 'tca' => (int) 8, 'esa' => (int) 8, 'tpr' => (int) 11, 'twi' => (int) 13, 'ugi' => (int) 9, 'vma' => (int) 8, 'vmu' => (int) 10, 'zma' => (int) 15 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb353780' $species_info = array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ) $local_species = 'pgr' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000499', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1066', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p29780' => 'bna', 'A02p33180' => 'bna', 'A03p16470' => 'bna', 'A03p66010' => 'bna', 'A04p25970' => 'bna', 'A06p01270' => 'bna', 'A06p46080' => 'bna', 'A07p11400' => 'bna', 'A08p01840' => 'bna', 'A08p08230' => 'bna', 'A08p25740' => 'bna', 'A09p32070' => 'bna', 'A09p37830' => 'bna', 'A09p42840' => 'bna', 'A09p42850' => 'bna', 'Aa31LG10G2060' => 'aar', 'Aa31LG2G7410' => 'aar', 'Aa31LG6G10200' => 'aar', 'Aa31LG6G16680' => 'aar', 'Aa31LG6G8470' => 'aar', 'Aa31LG9G12730' => 'aar', 'Aa31LG9G13680' => 'aar', 'Aa31LG9G14920' => 'aar', 'Aa31LG9G6650' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4977' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5467' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3254' => 'aag', 'Actinidia02578' => 'ach', 'Actinidia07693' => 'ach', 'Actinidia08413' => 'ach', 'Actinidia08414' => 'ach', 'Actinidia15289' => 'ach', 'Actinidia19871' => 'ach', 'Actinidia21475' => 'ach', 'Actinidia22576' => 'ach', 'Actinidia28327' => 'ach', 'Actinidia32491' => 'ach', 'Actinidia39463' => 'ach', 'Actinidia39571' => 'ach', 'Ah.01g013750' => 'amhyb', 'Ah.01g023210' => 'amhyb', 'Ah.04g164850' => 'amhyb', 'Ah.05g178060' => 'amhyb', 'Ah.07g204270' => 'amhyb', 'Ah.07g208480' => 'amhyb', 'Ah.09g237410' => 'amhyb', 'Ah.14g089460' => 'amhyb', 'AL1G41790' => 'aly', 'AL1G49050' => 'aly', 'AL1G53810' => 'aly', 'AL1G61400' => 'aly', 'AL4G18580' => 'aly', 'AL5G12510' => 'aly', 'AL5G12540' => 'aly', 'AL6G43230' => 'aly', 'AL7G10370' => 'aly', 'AL7G19250' => 'aly', 'AL8G12240' => 'aly', 'AL8G18540' => 'aly', 'Aqoxy1G02409' => 'aox', 'Aqoxy2G03993' => 'aox', 'Aqoxy3G03357' => 'aox', 'Aqoxy4G00785' => 'aox', 'Aqoxy5G02598' => 'aox', 'Aqoxy6G00132' => 'aox', 'Aqoxy7G01776' => 'aox', 'Aqoxy7G02316' => 'aox', 'Aqoxy7G03973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.12AFKW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B8730' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27IQR1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3F75VG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3RE0GA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41TCQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.527VTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FIR39' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5W8UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DA38EV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ63HS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H1I32C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HC27T5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4M8AP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7N3CZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9UVDZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LS1NQA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT1D4B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SKC4TM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCFV76' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF9Q1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQWD9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1ZM88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WE07RT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YCK7VH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJE6Q6' => 'arhy', 'AT1G28240' => 'ath', 'AT1G34550' => 'ath', 'AT1G53040' => 'ath', 'AT2G02910' => 'ath', 'AT4G09630' => 'ath', 'AT4G38500' => 'ath', 'AT5G42660' => 'ath', 'AT5G46220' => 'ath', 'ATR0152G026' => 'atr', 'ATR0564G343' => 'atr', 'ATR0706G151' => 'atr', 'ATR0733G207' => 'atr', 'ATR0751G234' => 'atr', 'ATR0807G048' => 'atr', 'ATR1091G084' => 'atr', 'Atru.chr10.1229' => 'acertr', 'Atru.chr10.1230' => 'acertr', 'Atru.chr10.1874' => 'acertr', 'Atru.chr11.1808' => 'acertr', 'Atru.chr13.1795' => 'acertr', 'Atru.chr13.570' => 'acertr', 'Atru.chr2.2608' => 'acertr', 'Atru.chr2.2609' => 'acertr', 'Atru.chr5.3428' => 'acertr', 'Atru.chr8.1171' => 'acertr', 'AUR62004651' => 'cqu', 'AUR62008675' => 'cqu', 'AUR62010014' => 'cqu', 'AUR62013004' => 'cqu', 'AUR62014825' => 'cqu', 'AUR62015015' => 'cqu', 'AUR62015151' => 'cqu', 'AUR62017020' => 'cqu', 'AUR62019422' => 'cqu', 'AUR62023570' => 'cqu', 'AUR62025571' => 'cqu', 'AUR62029098' => 'cqu', 'AUR62033863' => 'cqu', 'AUR62034296' => 'cqu', 'AUR62040075' => 'cqu', 'BcaB02g07334' => 'bca', 'BcaB02g10575' => 'bca', 'BcaB03g12119' => 'bca', 'BcaB03g12120' => 'bca', 'BcaB03g13945' => 'bca', 'BcaB04g17123' => 'bca', 'BcaB04g17867' => 'bca', 'BcaB04g19839' => 'bca', 'BcaB07g30317' => 'bca', 'BcaB07g32432' => 'bca', 'BcaB07g33362' => 'bca', 'BcaB08g36611' => 'bca', 'BcaC01g00028' => 'bca', 'BcaC01g01356' => 'bca', 'BcaC01g02034' => 'bca', 'BcaC01g06051' => 'bca', 'BcaC03g16839' => 'bca', 'BcaC03g17176' => 'bca', 'BcaC05g26829' => 'bca', 'BcaC06g31490' => 'bca', 'BcaC06g35344' => 'bca', 'BcaC06g36570' => 'bca', 'BcaC07g37537' => 'bca', 'BcaC08g43491' => 'bca', 'BcaC08g43773' => 'bca', 'BcaNung00234' => 'bca', 'BcaNung01982' => 'bca', 'BcaNung03707' => 'bca', 'BcaNung06454' => 'bca', 'BolC2t10762H' => 'bol', 'BolC2t11191H' => 'bol', 'BolC3t14322H' => 'bol', 'BolC3t19747H' => 'bol', 'BolC3t21425H' => 'bol', 'BolC4t27800H' => 'bol', 'BolC5t31423H' => 'bol', 'BolC6t35951H' => 'bol', 'BolC6t36282H' => 'bol', 'BolC7t40678H' => 'bol', 'BolC7t40679H' => 'bol', 'BolC7t42222H' => 'bol', 'BolC7t43492H' => 'bol', 'BolC7t46785H' => 'bol', 'BolC8t47853H' => 'bol', 'BolC9t56805H' => 'bol', 'BraA02t08000Z' => 'bra', 'BraA02t08341Z' => 'bra', 'BraA03t10936Z' => 'bra', 'BraA03t15657Z' => 'bra', 'BraA04t18100Z' => 'bra', 'BraA05t20523Z' => 'bra', 'BraA06t23353Z' => 'bra', 'BraA06t27473Z' => 'bra', 'BraA06t27769Z' => 'bra', 'BraA07t28928Z' => 'bra', 'BraA08t32236Z' => 'bra', 'BraA08t32841Z' => 'bra', 'BraA08t34524Z' => 'bra', 'BraA09t38742Z' => 'bra', 'BraA09t39295Z' => 'bra', 'C02p47180' => 'bna', 'C02p50990' => 'bna', 'C03p19360' => 'bna', 'C03p74950' => 'bna', 'C03p91000' => 'bna', 'C04p63260' => 'bna', 'C05p27050' => 'bna', 'C06p08750' => 'bna', 'C06p11490' => 'bna', 'C07p02820' => 'bna', 'C07p17180' => 'bna', 'C07p29440' => 'bna', 'C07p63730' => 'bna', 'C09p39260' => 'bna', 'CAN.G1164.34' => 'can', 'CAN.G1164.39' => 'can', 'CAN.G1530.3' => 'can', 'CAN.G162.61' => 'can', 'CAN.G176.6' => 'can', 'CAN.G289.49' => 'can', 'CAN.G370.21' => 'can', 'CAN.G370.22' => 'can', 'CAN.G371.117' => 'can', 'CAN.G58.37' => 'can', 'CAN.G588.98' => 'can', 'CANSAT21G2266' => 'cansat', 'CANSAT25G2799' => 'cansat', 'CANSAT35G0862' => 'cansat', 'CANSAT35G1704' => 'cansat', 'CANSAT35G1760' => 'cansat', 'CANSAT56G3971' => 'cansat', 'CANSAT56G4116' => 'cansat', 'CANSAT80G1259' => 'cansat', 'CARHR027730' => 'chi', 'CARHR033880' => 'chi', 'CARHR043270' => 'chi', 'CARHR145330' => 'chi', 'CARHR145340' => 'chi', 'CARHR175570' => 'chi', 'CARHR181570' => 'chi', 'CARHR258470' => 'chi', 'CARHR260490' => 'chi', 'CARHR294220' => 'chi', 'Carub.0001s2668' => 'cru', 'Carub.0001s3257' => 'cru', 'Carub.0001s4220' => 'cru', 'Carub.0005s0179' => 'cru', 'Carub.0006s2807' => 'cru', 'Carub.0007s0039' => 'cru', 'Carub.0008s0169' => 'cru', 'Carub.0008s0636' => 'cru', 'Ca_00338_v3' => 'car', 'Ca_00542_v3' => 'car', 'Ca_01844_v3' => 'car', 'Ca_10611_v3' => 'car', 'Ca_13326_v3' => 'car', 'Ca_17944_v3' => 'car', 'Ca_18546_v3' => 'car', 'Ca_24219_v3' => 'car', 'Ca_29972_v3' => 'car', 'CBR_g3681' => 'cbr', 'CBR_g40021' => 'cbr', 'Cc01_g08140' => 'ccan', 'Cc02_g13410' => 'ccan', 'Cc02_g37480' => 'ccan', 'Cc05_g12030' => 'ccan', 'Cc09_g03370' => 'ccan', 'Cc09_g10300' => 'ccan', 'Cc10_g03530' => 'ccan', 'Cc10_g11380' => 'ccan', 'CDE01G0176' => 'cde', 'CDE02G0675' => 'cde', 'CDE02G0942' => 'cde', 'CDE02G1153' => 'cde', 'CDE02G4177' => 'cde', 'CDE04G2117' => 'cde', 'CDE04G2736' => 'cde', 'CDE08G1161' => 'cde', 'CDE09G1238' => 'cde', 'Cfa000467' => 'cfa', 'Cfa000947' => 'cfa', 'Cfa004969' => 'cfa', 'Cfa005284' => 'cfa', 'Cfa008993' => 'cfa', 'Cfa018187' => 'cfa', 'Cfa018454' => 'cfa', 'Cfa020585' => 'cfa', 'Ciclev10000424m.g' => 'ccl', 'Ciclev10003605m.g' => 'ccl', 'Ciclev10007828m.g' => 'ccl', 'Ciclev10014620m.g' => 'ccl', 'Ciclev10015169m.g' => 'ccl', 'Ciclev10018291m.g' => 'ccl', 'Ciclev10028256m.g' => 'ccl', 'Ciclev10033822m.g' => 'ccl', 'CiPaw.05G060300' => 'cil', 'CiPaw.05G085000' => 'cil', 'CiPaw.06G083700' => 'cil', 'CiPaw.06G120300' => 'cil', 'CiPaw.09G060500' => 'cil', 'CiPaw.09G123800' => 'cil', 'CiPaw.11G169700' => 'cil', 'CiPaw.12G118300' => 'cil', 'CiPaw.15G071000' => 'cil', 'CiPaw.15G081900' => 'cil', 'ClCG01G024610' => 'cla', 'ClCG03G006070' => 'cla', 'ClCG05G019250' => 'cla', 'ClCG09G009500' => 'cla', 'ClCG11G008200' => 'cla', 'ClCG11G018080' => 'cla', 'COL.COLO4_17373' => 'col', 'COL.COLO4_22994' => 'col', 'COL.COLO4_26389' => 'col', 'COL.COLO4_27170' => 'col', 'COL.COLO4_31074' => 'col', 'COL.COLO4_31465' => 'col', 'COL.COLO4_36438' => 'col', 'COL.COLO4_36439' => 'col', 'Cpa.g.c38781' => 'cpa', 'Cpa.g.sc128.12' => 'cpa', 'Cpa.g.sc166.7' => 'cpa', 'Cpa.g.sc166.8' => 'cpa', 'Cpa.g.sc20.111' => 'cpa', 'Cpa.g.sc27.31' => 'cpa', 'Cpa.g.sc64.36' => 'cpa', 'Cpa.g.sc64.37' => 'cpa', 'Cpa.g.sc66.49' => 'cpa', 'Cpa.g.sc80.64' => 'cpa', 'CsaV3_1G012320' => 'csa', 'CsaV3_2G008480' => 'csa', 'CsaV3_2G033450' => 'csa', 'CsaV3_3G044830' => 'csa', 'CsaV3_4G033710' => 'csa', 'CsaV3_6G051730' => 'csa', 'CsaV3_7G025350' => 'csa', 'CSS0001067' => 'camsi', 'CSS0005996' => 'camsi', 'CSS0006590' => 'camsi', 'CSS0009673' => 'camsi', 'CSS0010201' => 'camsi', 'CSS0010549' => 'camsi', 'CSS0011364' => 'camsi', 'CSS0014473' => 'camsi', 'CSS0014961' => 'camsi', 'CSS0020191' => 'camsi', 'CSS0021165' => 'camsi', 'CSS0022306' => 'camsi', 'CSS0030591' => 'camsi', 'CSS0030696' => 'camsi', 'CSS0032653' => 'camsi', 'CSS0037487' => 'camsi', 'CSS0041102' => 'camsi', 'CSS0041261' => 'camsi', 'CSS0046246' => 'camsi', 'CSS0049256' => 'camsi', 'DCAR_004075' => 'dca', 'DCAR_011538' => 'dca', 'DCAR_019553' => 'dca', 'DCAR_020952' => 'dca', 'DCAR_021739' => 'dca', 'DCAR_027407' => 'dca', 'DCAR_027913' => 'dca', 'DCAR_028066' => 'dca', 'Dinv05899' => 'din', 'Dinv07563' => 'din', 'Dinv08010' => 'din', 'Dinv14125' => 'din', 'Dinv20172' => 'din', 'Dinv30743' => 'din', 'Dinv31229' => 'din', 'Dinv34162' => 'din', 'Dinv36028' => 'din', 'Dinv39368' => 'din', 'Dinv40565' => 'din', 'Dinv41706' => 'din', 'Duzib052G0089' => 'dzi', 'Duzib116G0641' => 'dzi', 'Duzib132G0069' => 'dzi', 'Duzib132G1219' => 'dzi', 'Duzib147G0278' => 'dzi', 'Duzib160G0480' => 'dzi', 'Duzib170G0661' => 'dzi', 'Duzib177G0591' => 'dzi', 'Duzib187G1353' => 'dzi', 'Duzib192G0858' => 'dzi', 'Duzib192G0883' => 'dzi', 'Duzib213G0506' => 'dzi', 'Duzib235G0289' => 'dzi', 'Duzib251G0422' => 'dzi', 'ECA232G3898' => 'eca', 'ECA233G5950' => 'eca', 'ECA234G1699' => 'eca', 'ECA234G2421' => 'eca', 'ECA236G0426' => 'eca', 'ECA236G4331' => 'eca', 'ECA248G2573' => 'eca', 'EL10Ac1g00077' => 'bvu', 'EL10Ac1g01746' => 'bvu', 'EL10Ac2g03464' => 'bvu', 'EL10Ac4g08176' => 'bvu', 'EL10Ac7g17521' => 'bvu', 'EL10Ac8g20386' => 'bvu', 'EL10Ac9g21343' => 'bvu', 'EL10Ac9g22688' => 'bvu', 'Eucgr.B03434' => 'egr', 'Eucgr.D00618' => 'egr', 'Eucgr.E02395' => 'egr', 'Eucgr.F01129' => 'egr', 'Eucgr.F02622' => 'egr', 'Eucgr.F04207' => 'egr', 'FAN01G0570' => 'fan', 'FAN03G3351' => 'fan', 'FAN06G3702' => 'fan', 'FAN07G2149' => 'fan', 'FAN10G3758' => 'fan', 'FAN11G1170' => 'fan', 'FAN11G2050' => 'fan', 'FAN11G2724' => 'fan', 'FAN12G1700' => 'fan', 'FAN12G2028' => 'fan', 'FAN15G1160' => 'fan', 'FAN15G3063' => 'fan', 'FAN16G2540' => 'fan', 'FAN16G3077' => 'fan', 'FAN16G3624' => 'fan', 'FAN17G0221' => 'fan', 'FAN20G2492' => 'fan', 'FAN20G2905' => 'fan', 'FAN21G0548' => 'fan', 'FAN21G1300' => 'fan', 'FAN22G0077' => 'fan', 'FAN22G1315' => 'fan', 'FAN24G1280' => 'fan', 'FAN24G1445' => 'fan', 'FAN24G3527' => 'fan', 'FAN25G0464' => 'fan', 'FAN25G2885' => 'fan', 'FAN25G3270' => 'fan', 'FAN27G1101' => 'fan', 'FAN27G2846' => 'fan', 'FAN27G3524' => 'fan', 'FvH4_2g11770' => 'fve', 'FvH4_2g15630' => 'fve', 'FvH4_3g05570' => 'fve', 'FvH4_3g09110' => 'fve', 'FvH4_3g19940' => 'fve', 'FvH4_4g04821' => 'fve', 'FvH4_4g31480' => 'fve', 'FvH4_7g01740' => 'fve', 'Glyma.05G130400' => 'gma', 'Glyma.05G156400' => 'gma', 'Glyma.07G197000' => 'gma', 'Glyma.08G085151' => 'gma', 'Glyma.08G114500' => 'gma', 'Glyma.08G300400' => 'gma', 'Glyma.10G215800' => 'gma', 'Glyma.12G224400' => 'gma', 'Glyma.13G179300' => 'gma', 'Glyma.13G218151' => 'gma', 'Glyma.13G238800' => 'gma', 'Glyma.13G276900' => 'gma', 'Glyma.14G078200' => 'gma', 'Glyma.15G074500' => 'gma', 'Glyma.15G094100' => 'gma', 'Glyma.17G247200' => 'gma', 'Glyma.18G120100' => 'gma', 'Glyma.20G176000' => 'gma', 'Gohir.A01G063600' => 'ghi', 'Gohir.A01G170301' => 'ghi', 'Gohir.A02G060500' => 'ghi', 'Gohir.A05G133850' => 'ghi', 'Gohir.A05G161400' => 'ghi', 'Gohir.A06G012900' => 'ghi', 'Gohir.A06G035901' => 'ghi', 'Gohir.A06G127100' => 'ghi', 'Gohir.A06G210500' => 'ghi', 'Gohir.A08G008650' => 'ghi', 'Gohir.A09G072700' => 'ghi', 'Gohir.A09G088301' => 'ghi', 'Gohir.A10G040600' => 'ghi', 'Gohir.A12G036300' => 'ghi', 'Gohir.A12G143350' => 'ghi', 'Gohir.A12G165500' => 'ghi', 'Gohir.A13G145700' => 'ghi', 'Gohir.D01G050000' => 'ghi', 'Gohir.D01G051366' => 'ghi', 'Gohir.D01G161350' => 'ghi', 'Gohir.D02G065900' => 'ghi', 'Gohir.D05G164200' => 'ghi', 'Gohir.D05G355500' => 'ghi', 'Gohir.D06G010400' => 'ghi', 'Gohir.D06G111250' => 'ghi', 'Gohir.D06G132000' => 'ghi', 'Gohir.D06G210500' => 'ghi', 'Gohir.D07G165675' => 'ghi', 'Gohir.D08G062240' => 'ghi', 'Gohir.D08G086101' => 'ghi', 'Gohir.D08G138060' => 'ghi', 'Gohir.D09G072300' => 'ghi', 'Gohir.D10G041400' => 'ghi', 'Gohir.D11G191020' => 'ghi', 'Gohir.D11G212066' => 'ghi', 'Gohir.D12G036300' => 'ghi', 'Gohir.D12G168600' => 'ghi', 'Gohir.D13G150600' => 'ghi', 'Gorai.001G057300' => 'gra', 'Gorai.002G069900' => 'gra', 'Gorai.002G200000' => 'gra', 'Gorai.003G067600' => 'gra', 'Gorai.005G074800' => 'gra', 'Gorai.006G087300' => 'gra', 'Gorai.008G037500' => 'gra', 'Gorai.008G181400' => 'gra', 'Gorai.009G169400' => 'gra', 'Gorai.009G387900' => 'gra', 'Gorai.010G013300' => 'gra', 'Gorai.010G153800' => 'gra', 'Gorai.010G255800' => 'gra', 'Gorai.011G043700' => 'gra', 'Gorai.011G198900' => 'gra', 'Gorai.013G168400' => 'gra', 'GSVIVG01005212001' => 'vvi', 'GSVIVG01006163001' => 'vvi', 'GSVIVG01009625001' => 'vvi', 'GSVIVG01014338001' => 'vvi', 'GSVIVG01020005001' => 'vvi', 'GSVIVG01021450001' => 'vvi', 'GSVIVG01023975001' => 'vvi', 'GSVIVG01034490001' => 'vvi', 'HanXRQChr04g0112071' => 'han', 'HanXRQChr05g0131151' => 'han', 'HanXRQChr09g0262371' => 'han', 'HanXRQChr09g0268401' => 'han', 'HanXRQChr10g0279241' => 'han', 'HanXRQChr10g0297961' => 'han', 'HanXRQChr11g0326231' => 'han', 'HanXRQChr11g0328471' => 'han', 'HanXRQChr16g0507941' => 'han', 'HanXRQChr17g0560211' => 'han', 'Haze_02108' => 'cav', 'Haze_02428' => 'cav', 'Haze_05593' => 'cav', 'Haze_06448' => 'cav', 'Haze_09427' => 'cav', 'Haze_12022' => 'cav', 'Haze_17612' => 'cav', 'Haze_17928' => 'cav', 'Hma1.2p1_0032F.1_g019250' => 'hma', 'Hma1.2p1_0163F.1_g072690' => 'hma', 'Hma1.2p1_0265F.1_g106710' => 'hma', 'Hma1.2p1_0286F.1_g113970' => 'hma', 'Hma1.2p1_0363F.1_g136640' => 'hma', 'Hma1.2p1_0584F.1_g183470' => 'hma', 'Hma1.2p1_0885F.1_g232570' => 'hma', 'HPP92_006022' => 'vpl', 'HPP92_007320' => 'vpl', 'HPP92_011521' => 'vpl', 'HPP92_019387' => 'vpl', 'HPP92_024038' => 'vpl', 'Hund05891' => 'sun', 'Hund06450' => 'sun', 'Hund12053' => 'sun', 'Hund16800' => 'sun', 'Hund21222' => 'sun', 'Hund22896' => 'sun', 'Hund23746' => 'sun', 'Hund27083' => 'sun', 'Lalb_Chr02g0141831' => 'lal', 'Lalb_Chr02g0141841' => 'lal', 'Lalb_Chr05g0220411' => 'lal', 'Lalb_Chr06g0162081' => 'lal', 'Lalb_Chr09g0327651' => 'lal', 'Lalb_Chr13g0295051' => 'lal', 'Lalb_Chr15g0086801' => 'lal', 'Lalb_Chr16g0383781' => 'lal', 'Lalb_Chr16g0383791' => 'lal', 'Lalb_Chr18g0055441' => 'lal', 'Lalb_Chr18g0059611' => 'lal', 'Lalb_Chr20g0109661' => 'lal', 'Lalb_Chr20g0109831' => 'lal', 'Lalb_Chr20g0121871' => 'lal', 'Lalb_Chr22g0355361' => 'lal', 'Lalb_Chr25g0286371' => 'lal', 'Lj1A1187G43' => 'lonja', 'Lj1A1205T50' => 'lonja', 'Lj1A800G33' => 'lonja', 'Lj1C1187T7' => 'lonja', 'Lj1C843T11' => 'lonja', 'Lj1g0010940' => 'lja', 'Lj2A288T69' => 'lonja', 'Lj3g0024276' => 'lja', 'Lj4A47T76' => 'lonja', 'Lj4g0005805' => 'lja', 'Lj4g0006097' => 'lja', 'Lj4g0008528' => 'lja', 'Lj4g0024907' => 'lja', 'Lj5g0012472' => 'lja', 'Lj5g0018648' => 'lja', 'Lj6C789G1' => 'lonja', 'Lj6g0004000' => 'lja', 'Lj7A292G67' => 'lonja', 'Lj7A292T64' => 'lonja', 'Lj9A400T58' => 'lonja', 'Lsat_1_v5_gn_1_126181' => 'lsa', 'Lsat_1_v5_gn_4_123041' => 'lsa', 'Lsat_1_v5_gn_4_133620' => 'lsa', 'Lsat_1_v5_gn_4_53221' => 'lsa', 'Lsat_1_v5_gn_4_71961' => 'lsa', 'Lsat_1_v5_gn_7_105241' => 'lsa', 'Lsat_1_v5_gn_7_21361' => 'lsa', 'Lsat_1_v5_gn_7_28860' => 'lsa', 'Lsat_1_v5_gn_7_31260' => 'lsa', 'Lsat_1_v5_gn_8_52801' => 'lsa', 'Manes.02G191400' => 'mes', 'Manes.03G110100' => 'mes', 'Manes.04G071100' => 'mes', 'Manes.05G100500' => 'mes', 'Manes.05G164700' => 'mes', 'Manes.15G087000' => 'mes', 'Manes.15G121500' => 'mes', 'Manes.16G028300' => 'mes', 'Manes.17G046100' => 'mes', 'Manes.17G069800' => 'mes', 'Manes.18G100500' => 'mes', 'Mapoly0002s0109' => 'mpo', 'Mapoly0024s0007' => 'mpo', 'Mapoly0089s0032' => 'mpo', 'MBI04_g42241_MAGBIO' => 'mbi', 'MBI05_g11988_MAGBIO' => 'mbi', 'MBI05_g35452_MAGBIO' => 'mbi', 'MBI07_g30179_MAGBIO' => 'mbi', 'MBI07_g35859_MAGBIO' => 'mbi', 'MBI07_g35860_MAGBIO' => 'mbi', 'MBI07_g37166_MAGBIO' => 'mbi', 'MBI08_g18172_MAGBIO' => 'mbi', 'MBI09_g08441_MAGBIO' => 'mbi', 'MBI13_g01676_MAGBIO' => 'mbi', 'MBI14_g42955_MAGBIO' => 'mbi', 'MBI16_g13161_MAGBIO' => 'mbi', 'MBI17_g27204_MAGBIO' => 'mbi', 'MBI19_g21595_MAGBIO' => 'mbi', 'MD00G1148400' => 'mdo', 'MD02G1301200' => 'mdo', 'MD03G1227800' => 'mdo', 'MD05G1041100' => 'mdo', 'MD05G1124800' => 'mdo', 'MD05G1284000' => 'mdo', 'MD05G1338800' => 'mdo', 'MD05G1338900' => 'mdo', 'MD07G1022800' => 'mdo', 'MD10G1047500' => 'mdo', 'MD10G1127500' => 'mdo', 'MD10G1262300' => 'mdo', 'MD10G1293800' => 'mdo', 'MD16G1074300' => 'mdo', 'Medtr1g021670' => 'mtr', 'Medtr1g096320' => 'mtr', 'Medtr2g013690' => 'mtr', 'Medtr2g019450' => 'mtr', 'Medtr2g085170' => 'mtr', 'Medtr4g088785' => 'mtr', 'Medtr8g055930' => 'mtr', 'Medtr8g085850' => 'mtr', 'MELO3C002605.2' => 'cme', 'MELO3C003891.2' => 'cme', 'MELO3C004012.2' => 'cme', 'MELO3C007134.2' => 'cme', 'MELO3C008118.2' => 'cme', 'MELO3C016700.2' => 'cme', 'MELO3C024127.2' => 'cme', 'MELO3C033361.2' => 'cme', 'MELO3C033362.2' => 'cme', 'Migut.C00430' => 'egut', 'Migut.C01246' => 'egut', 'Migut.E00101' => 'egut', 'Migut.H01486' => 'egut', 'Migut.H01939' => 'egut', 'Migut.K00360' => 'egut', 'Migut.M00910' => 'egut', 'Migut.M01139' => 'egut', 'Migut.N02677' => 'egut', 'MSTRG.13252' => 'ama', 'MSTRG.14701' => 'ama', 'MSTRG.1521' => 'ama', 'MSTRG.15884' => 'ama', 'MSTRG.16242' => 'ama', 'MSTRG.22285' => 'ama', 'MSTRG.22444' => 'ama', 'MSTRG.2349' => 'ama', 'MSTRG.26308' => 'ama', 'MSTRG.28296' => 'ama', 'MSTRG.9895' => 'ama', 'Nitab4.5_0000110g0060' => 'nta', 'Nitab4.5_0000420g0130' => 'nta', 'Nitab4.5_0000422g0030' => 'nta', 'Nitab4.5_0000560g0180' => 'nta', 'Nitab4.5_0000703g0100' => 'nta', 'Nitab4.5_0000786g0200' => 'nta', 'Nitab4.5_0001336g0020' => 'nta', 'Nitab4.5_0001796g0030' => 'nta', 'Nitab4.5_0003348g0060' => 'nta', 'Nitab4.5_0003698g0040' => 'nta', 'Nitab4.5_0003942g0090' => 'nta', 'Nitab4.5_0004775g0070' => 'nta', 'Nitab4.5_0004864g0030' => 'nta', 'Nitab4.5_0005615g0020' => 'nta', 'Nitab4.5_0009288g0030' => 'nta', 'Nitab4.5_0009341g0010' => 'nta', 'Nitab4.5_0009535g0010' => 'nta', 'Nn1g03995' => 'nnu', 'Nn1g04100' => 'nnu', 'Nn1g06530' => 'nnu', 'Nn3g16404' => 'nnu', 'Nn3g17212' => 'nnu', 'Nn3g20776' => 'nnu', 'Nn3g21923' => 'nnu', 'Nn5g27737' => 'nnu', 'Nn5g29461' => 'nnu', 'Nn7g38355' => 'nnu', 'Nn8g39873' => 'nnu', 'Oeu000548.2' => 'oeu', 'Oeu004672.1' => 'oeu', 'Oeu015605.2' => 'oeu', 'Oeu016092.1' => 'oeu', 'Oeu017879.3' => 'oeu', 'Oeu024910.1' => 'oeu', 'Oeu028965.1' => 'oeu', 'Oeu031269.1' => 'oeu', 'Oeu031270.1' => 'oeu', 'Oeu032535.1' => 'oeu', 'Oeu034151.1' => 'oeu', 'Oeu034152.1' => 'oeu', 'Oeu034588.2' => 'oeu', 'Oeu050846.1' => 'oeu', 'Oeu050849.2' => 'oeu', 'Oeu051063.2' => 'oeu', 'Oeu052368.1' => 'oeu', 'Oeu052370.1' => 'oeu', 'Os01g0210400' => 'osa', 'Os01g0304300' => 'osa', 'Os01g0749100' => 'osa', 'Os02g0745800' => 'osa', 'Os03g0769050' => 'osa', 'Os05g0531500' => 'osa', 'Os06g0724300' => 'osa', 'Os11g0198100' => 'osa', 'Peaxi162Scf00069g01425' => 'pax', 'Peaxi162Scf00280g00811' => 'pax', 'Peaxi162Scf00310g00615' => 'pax', 'Peaxi162Scf00362g00542' => 'pax', 'Peaxi162Scf00461g00310' => 'pax', 'Peaxi162Scf00530g00118' => 'pax', 'Peaxi162Scf00541g00057' => 'pax', 'Peaxi162Scf00661g00017' => 'pax', 'Peaxi162Scf00926g00027' => 'pax', 'Peaxi162Scf01064g00263' => 'pax', 'Peaxi162Scf01211g00135' => 'pax', 'PGR004G2336' => 'pgr', 'PGR042G0327' => 'pgr', 'PGR042G1957' => 'pgr', 'PGR042G2003' => 'pgr', 'PGR042G3929' => 'pgr', 'PGR083G1137' => 'pgr', 'PGR083G1364' => 'pgr', 'PGSC0003DMG400003381' => 'stu', 'PGSC0003DMG400003417' => 'stu', 'PGSC0003DMG400008981' => 'stu', 'PGSC0003DMG400012417' => 'stu', 'PGSC0003DMG400012823' => 'stu', 'PGSC0003DMG400016885' => 'stu', 'PGSC0003DMG400022812' => 'stu', 'PGSC0003DMG400029726' => 'stu', 'PGSC0003DMG401009243' => 'stu', 'PGSC0003DMG401031505' => 'stu', 'PGSC0003DMG402031505' => 'stu', 'Phvul.001G017600' => 'pvu', 'Phvul.002G193500' => 'pvu', 'Phvul.002G228900' => 'pvu', 'Phvul.002G236800' => 'pvu', 'Phvul.003G049500' => 'pvu', 'Phvul.005G072000' => 'pvu', 'Phvul.006G164800' => 'pvu', 'Phvul.006G185100' => 'pvu', 'Phvul.007G090000' => 'pvu', 'Potri.001G399800' => 'ptr', 'Potri.002G149900' => 'ptr', 'Potri.004G044100' => 'ptr', 'Potri.004G177600' => 'ptr', 'Potri.009G138000' => 'ptr', 'Potri.010G094000' => 'ptr', 'Potri.011G053000' => 'ptr', 'Potri.011G119300' => 'ptr', 'Potri.013G113700' => 'ptr', 'Potri.018G107800' => 'ptr', 'Potri.019G084100' => 'ptr', 'Pp3c14_23720' => 'ppa', 'Pp3c16_6340' => 'ppa', 'Pp3c23_13420' => 'ppa', 'Pp3c24_2740' => 'ppa', 'Pp3c25_860' => 'ppa', 'Pp3c8_21750' => 'ppa', 'Prupe.1G273000' => 'ppe', 'Prupe.1G273700' => 'ppe', 'Prupe.1G274100' => 'ppe', 'Prupe.2G023300' => 'ppe', 'Prupe.4G048000' => 'ppe', 'Prupe.4G080400' => 'ppe', 'Prupe.4G181200' => 'ppe', 'Prupe.8G056900' => 'ppe', 'Prupe.8G168700' => 'ppe', 'Psat1g189080' => 'psa', 'Psat1g204760' => 'psa', 'Psat4g175560' => 'psa', 'Psat4g177720' => 'psa', 'Psat5g244240' => 'psa', 'Psat6g010720' => 'psa', 'Psat6g187200' => 'psa', 'Psat7g072040' => 'psa', 'PSO017G3501' => 'pso', 'PSO063G2148' => 'pso', 'PSO063G5608' => 'pso', 'PSO210G6392' => 'pso', 'PSO541G2319' => 'pso', 'PSO541G2836' => 'pso', 'PSO541G4012' => 'pso', 'PSO541G6253' => 'pso', 'PSO675G0580' => 'pso', 'PSO675G0856' => 'pso', 'PSO675G5635' => 'pso', 'PSO675G9157' => 'pso', 'PSO832G1660' => 'pso', 'PSO832G1969' => 'pso', 'QL02p007186' => 'qlo', 'QL02p033904' => 'qlo', 'QL03p064391' => 'qlo', 'QL05p040593' => 'qlo', 'QL05p058242' => 'qlo', 'QL08p021825' => 'qlo', 'QL11p004981' => 'qlo', 'RcHm_v2.0_Chr1g0318301' => 'rch', 'RcHm_v2.0_Chr4g0418501' => 'rch', 'RcHm_v2.0_Chr4g0439971' => 'rch', 'RcHm_v2.0_Chr5g0008541' => 'rch', 'RcHm_v2.0_Chr5g0014101' => 'rch', 'RcHm_v2.0_Chr5g0014131' => 'rch', 'RcHm_v2.0_Chr5g0033621' => 'rch', 'RcHm_v2.0_Chr6g0272041' => 'rch', 'RcHm_v2.0_Chr6g0278831' => 'rch', 'Rhsim02G0130400' => 'rsi', 'Rhsim02G0171100' => 'rsi', 'Rhsim05G0053000' => 'rsi', 'Rhsim05G0053100' => 'rsi', 'Rhsim06G0096500' => 'rsi', 'Rhsim06G0096600' => 'rsi', 'Rhsim06G0199100' => 'rsi', 'Rhsim12G0062300' => 'rsi', 'Rhsim12G0062800' => 'rsi', 'Sabra02G0118600' => 'sbr', 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'Solyc03g079860.2' => 'sly', 'Solyc04g079770.3' => 'sly', 'Solyc05g007430.4' => 'sly', 'Solyc07g063150.3' => 'sly', 'Solyc08g016620.3' => 'sly', 'Solyc09g057590.3' => 'sly', 'Solyc09g057600.1' => 'sly', 'Solyc10g009050.3' => 'sly', 'Solyc11g017420.2' => 'sly', 'Sopen01g053810' => 'spe', 'Sopen02g023040' => 'spe', 'Sopen03g002440' => 'spe', 'Sopen04g033350' => 'spe', 'Sopen05g003310' => 'spe', 'Sopen07g004050' => 'spe', 'Sopen07g031340' => 'spe', 'Sopen08g006990' => 'spe', 'Sopen10g004830' => 'spe', 'Sopen11g009370' => 'spe', 'Sp1g24450' => 'spa', 'Sp1g29670' => 'spa', 'Sp1g39600' => 'spa', 'Sp2g11080' => 'spa', 'Sp2g13970' => 'spa', 'Sp4g16130' => 'spa', 'Sp6g13080' => 'spa', 'Sp7g37270' => 'spa', 'TAR371G0065' => 'tar', 'TAR376G0340' => 'tar', 'TAR376G0435' => 'tar', 'TAR381G0002' => 'tar', 'TAR381G1236' => 'tar', 'TAR624G0055' => 'tar', 'TAR624G0324' => 'tar', 'TAR624G0696' => 'tar', 'TAR624G0906' => 'tar', 'TAR625G0107' => 'tar', 'TAR626G0015' => 'tar', 'TAR626G1356' => 'tar', 'TAR627G0888' => 'tar', 'TAR628G0399' => 'tar', 'TAR628G1327' => 'tar', 'TAR629G2831' => 'tar', 'TAR629G2874' => 'tar', 'TAR633G1432' => 'tar', 'TAR633G2771' => 'tar', 'THA.LOC104803394' => 'tha', 'THA.LOC104805153' => 'tha', 'THA.LOC104806784' => 'tha', 'THA.LOC104810473' => 'tha', 'THA.LOC104813100' => 'tha', 'THA.LOC104814215' => 'tha', 'THA.LOC104815554' => 'tha', 'THA.LOC104820544' => 'tha', 'THA.LOC104824754' => 'tha', 'THA.LOC104827717' => 'tha', 'Thecc.02G031400' => 'tca', 'Thecc.02G055900' => 'tca', 'Thecc.02G350800' => 'tca', 'Thecc.06G150900' => 'tca', 'Thecc.06G186600' => 'tca', 'Thecc.07G089600' => 'tca', 'Thecc.08G020400' => 'tca', 'Thecc.08G182100' => 'tca', 'Thhalv10000873m.g' => 'esa', 'Thhalv10004185m.g' => 'esa', 'Thhalv10006981m.g' => 'esa', 'Thhalv10007204m.g' => 'esa', 'Thhalv10011374m.g' => 'esa', 'Thhalv10013482m.g' => 'esa', 'Thhalv10017801m.g' => 'esa', 'Thhalv10024983m.g' => 'esa', 'TPR.G12072' => 'tpr', 'TPR.G15769' => 'tpr', 'TPR.G16504' => 'tpr', 'TPR.G16506' => 'tpr', 'TPR.G24345' => 'tpr', 'TPR.G26666' => 'tpr', 'TPR.G27320' => 'tpr', 'TPR.G31819' => 'tpr', 'TPR.G38879' => 'tpr', 'TPR.G39015' => 'tpr', 'TPR.G8819' => 'tpr', 'TWI09G0924' => 'twi', 'TWI12G0811' => 'twi', 'TWI12G1294' => 'twi', 'TWI31G0150' => 'twi', 'TWI36G1262' => 'twi', 'TWI38G1287' => 'twi', 'TWI38G1633' => 'twi', 'TWI38G1982' => 'twi', 'TWI39G0116' => 'twi', 'TWI60G1011' => 'twi', 'TWI63G0171' => 'twi', 'TWI73G0839' => 'twi', 'TWI79G1511' => 'twi', 'unitig_0.g915' => 'ugi', 'unitig_0.g916' => 'ugi', 'unitig_21.g20219' => 'ugi', 'unitig_21.g20416' => 'ugi', 'unitig_578.g16132' => 'ugi', 'unitig_578.g16718' => 'ugi', 'unitig_62.g23481' => 'ugi', 'unitig_744.g24535' => 'ugi', 'unitig_749.g13525' => 'ugi', 'vmacro01248' => 'vma', 'vmacro02290' => 'vma', 'vmacro10946' => 'vma', 'vmacro11865' => 'vma', 'vmacro12493' => 'vma', 'vmacro17322' => 'vma', 'vmacro21599' => 'vma', 'vmacro23041' => 'vma', 'VMungo0251G0004' => 'vmu', 'VMungo0251G2639' => 'vmu', 'VMungo0251G2967' => 'vmu', 'VMungo0540G0864' => 'vmu', 'VMungo0540G1569' => 'vmu', 'VMungo0647G0317' => 'vmu', 'VMungo0720G1373' => 'vmu', 'VMungo0720G1508' => 'vmu', 'VMungo1080G0485' => 'vmu', 'VMungo1215G3177' => 'vmu', 'Zm00001eb112600' => 'zma', 'Zm00001eb120220' => 'zma', 'Zm00001eb153240' => 'zma', 'Zm00001eb168880' => 'zma', 'Zm00001eb213920' => 'zma', 'Zm00001eb228280' => 'zma', 'Zm00001eb254580' => 'zma', 'Zm00001eb272180' => 'zma', 'Zm00001eb293190' => 'zma', 'Zm00001eb322930' => 'zma', 'Zm00001eb353360' => 'zma', 'Zm00001eb353390' => 'zma', 'Zm00001eb353430' => 'zma', 'Zm00001eb353440' => 'zma', 'Zm00001eb353780' => 'zma' ), 'gf_id' => 'HOM05D000499', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000499' ), 'data_identifier' => 'HOM05D000499', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000499', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1066', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p29780' => 'bna', 'A02p33180' => 'bna', 'A03p16470' => 'bna', 'A03p66010' => 'bna', 'A04p25970' => 'bna', 'A06p01270' => 'bna', 'A06p46080' => 'bna', 'A07p11400' => 'bna', 'A08p01840' => 'bna', 'A08p08230' => 'bna', 'A08p25740' => 'bna', 'A09p32070' => 'bna', 'A09p37830' => 'bna', 'A09p42840' => 'bna', 'A09p42850' => 'bna', 'Aa31LG10G2060' => 'aar', 'Aa31LG2G7410' => 'aar', 'Aa31LG6G10200' => 'aar', 'Aa31LG6G16680' => 'aar', 'Aa31LG6G8470' => 'aar', 'Aa31LG9G12730' => 'aar', 'Aa31LG9G13680' => 'aar', 'Aa31LG9G14920' => 'aar', 'Aa31LG9G6650' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4977' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5467' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3254' => 'aag', 'Actinidia02578' => 'ach', 'Actinidia07693' => 'ach', 'Actinidia08413' => 'ach', 'Actinidia08414' => 'ach', 'Actinidia15289' => 'ach', 'Actinidia19871' => 'ach', 'Actinidia21475' => 'ach', 'Actinidia22576' => 'ach', 'Actinidia28327' => 'ach', 'Actinidia32491' => 'ach', 'Actinidia39463' => 'ach', 'Actinidia39571' => 'ach', 'Ah.01g013750' => 'amhyb', 'Ah.01g023210' => 'amhyb', 'Ah.04g164850' => 'amhyb', 'Ah.05g178060' => 'amhyb', 'Ah.07g204270' => 'amhyb', 'Ah.07g208480' => 'amhyb', 'Ah.09g237410' => 'amhyb', 'Ah.14g089460' => 'amhyb', 'AL1G41790' => 'aly', 'AL1G49050' => 'aly', 'AL1G53810' => 'aly', 'AL1G61400' => 'aly', 'AL4G18580' => 'aly', 'AL5G12510' => 'aly', 'AL5G12540' => 'aly', 'AL6G43230' => 'aly', 'AL7G10370' => 'aly', 'AL7G19250' => 'aly', 'AL8G12240' => 'aly', 'AL8G18540' => 'aly', 'Aqoxy1G02409' => 'aox', 'Aqoxy2G03993' => 'aox', 'Aqoxy3G03357' => 'aox', 'Aqoxy4G00785' => 'aox', 'Aqoxy5G02598' => 'aox', 'Aqoxy6G00132' => 'aox', 'Aqoxy7G01776' => 'aox', 'Aqoxy7G02316' => 'aox', 'Aqoxy7G03973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.12AFKW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B8730' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27IQR1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3F75VG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3RE0GA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41TCQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.527VTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FIR39' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5W8UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DA38EV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ63HS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H1I32C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HC27T5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4M8AP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7N3CZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9UVDZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LS1NQA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT1D4B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SKC4TM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCFV76' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF9Q1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQWD9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1ZM88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WE07RT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YCK7VH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJE6Q6' => 'arhy', 'AT1G28240' => 'ath', 'AT1G34550' => 'ath', 'AT1G53040' => 'ath', 'AT2G02910' => 'ath', 'AT4G09630' => 'ath', 'AT4G38500' => 'ath', 'AT5G42660' => 'ath', 'AT5G46220' => 'ath', 'ATR0152G026' => 'atr', 'ATR0564G343' => 'atr', 'ATR0706G151' => 'atr', 'ATR0733G207' => 'atr', 'ATR0751G234' => 'atr', 'ATR0807G048' => 'atr', 'ATR1091G084' => 'atr', 'Atru.chr10.1229' => 'acertr', 'Atru.chr10.1230' => 'acertr', 'Atru.chr10.1874' => 'acertr', 'Atru.chr11.1808' => 'acertr', 'Atru.chr13.1795' => 'acertr', 'Atru.chr13.570' => 'acertr', 'Atru.chr2.2608' => 'acertr', 'Atru.chr2.2609' => 'acertr', 'Atru.chr5.3428' => 'acertr', 'Atru.chr8.1171' => 'acertr', 'AUR62004651' => 'cqu', 'AUR62008675' => 'cqu', 'AUR62010014' => 'cqu', 'AUR62013004' => 'cqu', 'AUR62014825' => 'cqu', 'AUR62015015' => 'cqu', 'AUR62015151' => 'cqu', 'AUR62017020' => 'cqu', 'AUR62019422' => 'cqu', 'AUR62023570' => 'cqu', 'AUR62025571' => 'cqu', 'AUR62029098' => 'cqu', 'AUR62033863' => 'cqu', 'AUR62034296' => 'cqu', 'AUR62040075' => 'cqu', 'BcaB02g07334' => 'bca', 'BcaB02g10575' => 'bca', 'BcaB03g12119' => 'bca', 'BcaB03g12120' => 'bca', 'BcaB03g13945' => 'bca', 'BcaB04g17123' => 'bca', 'BcaB04g17867' => 'bca', 'BcaB04g19839' => 'bca', 'BcaB07g30317' => 'bca', 'BcaB07g32432' => 'bca', 'BcaB07g33362' => 'bca', 'BcaB08g36611' => 'bca', 'BcaC01g00028' => 'bca', 'BcaC01g01356' => 'bca', 'BcaC01g02034' => 'bca', 'BcaC01g06051' => 'bca', 'BcaC03g16839' => 'bca', 'BcaC03g17176' => 'bca', 'BcaC05g26829' => 'bca', 'BcaC06g31490' => 'bca', 'BcaC06g35344' => 'bca', 'BcaC06g36570' => 'bca', 'BcaC07g37537' => 'bca', 'BcaC08g43491' => 'bca', 'BcaC08g43773' => 'bca', 'BcaNung00234' => 'bca', 'BcaNung01982' => 'bca', 'BcaNung03707' => 'bca', 'BcaNung06454' => 'bca', 'BolC2t10762H' => 'bol', 'BolC2t11191H' => 'bol', 'BolC3t14322H' => 'bol', 'BolC3t19747H' => 'bol', 'BolC3t21425H' => 'bol', 'BolC4t27800H' => 'bol', 'BolC5t31423H' => 'bol', 'BolC6t35951H' => 'bol', 'BolC6t36282H' => 'bol', 'BolC7t40678H' => 'bol', 'BolC7t40679H' => 'bol', 'BolC7t42222H' => 'bol', 'BolC7t43492H' => 'bol', 'BolC7t46785H' => 'bol', 'BolC8t47853H' => 'bol', 'BolC9t56805H' => 'bol', 'BraA02t08000Z' => 'bra', 'BraA02t08341Z' => 'bra', 'BraA03t10936Z' => 'bra', 'BraA03t15657Z' => 'bra', 'BraA04t18100Z' => 'bra', 'BraA05t20523Z' => 'bra', 'BraA06t23353Z' => 'bra', 'BraA06t27473Z' => 'bra', 'BraA06t27769Z' => 'bra', 'BraA07t28928Z' => 'bra', 'BraA08t32236Z' => 'bra', 'BraA08t32841Z' => 'bra', 'BraA08t34524Z' => 'bra', 'BraA09t38742Z' => 'bra', 'BraA09t39295Z' => 'bra', 'C02p47180' => 'bna', 'C02p50990' => 'bna', 'C03p19360' => 'bna', 'C03p74950' => 'bna', 'C03p91000' => 'bna', 'C04p63260' => 'bna', 'C05p27050' => 'bna', 'C06p08750' => 'bna', 'C06p11490' => 'bna', 'C07p02820' => 'bna', 'C07p17180' => 'bna', 'C07p29440' => 'bna', 'C07p63730' => 'bna', 'C09p39260' => 'bna', 'CAN.G1164.34' => 'can', 'CAN.G1164.39' => 'can', 'CAN.G1530.3' => 'can', 'CAN.G162.61' => 'can', 'CAN.G176.6' => 'can', 'CAN.G289.49' => 'can', 'CAN.G370.21' => 'can', 'CAN.G370.22' => 'can', 'CAN.G371.117' => 'can', 'CAN.G58.37' => 'can', 'CAN.G588.98' => 'can', 'CANSAT21G2266' => 'cansat', 'CANSAT25G2799' => 'cansat', 'CANSAT35G0862' => 'cansat', 'CANSAT35G1704' => 'cansat', 'CANSAT35G1760' => 'cansat', 'CANSAT56G3971' => 'cansat', 'CANSAT56G4116' => 'cansat', 'CANSAT80G1259' => 'cansat', 'CARHR027730' => 'chi', 'CARHR033880' => 'chi', 'CARHR043270' => 'chi', 'CARHR145330' => 'chi', 'CARHR145340' => 'chi', 'CARHR175570' => 'chi', 'CARHR181570' => 'chi', 'CARHR258470' => 'chi', 'CARHR260490' => 'chi', 'CARHR294220' => 'chi', 'Carub.0001s2668' => 'cru', 'Carub.0001s3257' => 'cru', 'Carub.0001s4220' => 'cru', 'Carub.0005s0179' => 'cru', 'Carub.0006s2807' => 'cru', 'Carub.0007s0039' => 'cru', 'Carub.0008s0169' => 'cru', 'Carub.0008s0636' => 'cru', 'Ca_00338_v3' => 'car', 'Ca_00542_v3' => 'car', 'Ca_01844_v3' => 'car', 'Ca_10611_v3' => 'car', 'Ca_13326_v3' => 'car', 'Ca_17944_v3' => 'car', 'Ca_18546_v3' => 'car', 'Ca_24219_v3' => 'car', 'Ca_29972_v3' => 'car', 'CBR_g3681' => 'cbr', 'CBR_g40021' => 'cbr', 'Cc01_g08140' => 'ccan', 'Cc02_g13410' => 'ccan', 'Cc02_g37480' => 'ccan', 'Cc05_g12030' => 'ccan', 'Cc09_g03370' => 'ccan', 'Cc09_g10300' => 'ccan', 'Cc10_g03530' => 'ccan', 'Cc10_g11380' => 'ccan', 'CDE01G0176' => 'cde', 'CDE02G0675' => 'cde', 'CDE02G0942' => 'cde', 'CDE02G1153' => 'cde', 'CDE02G4177' => 'cde', 'CDE04G2117' => 'cde', 'CDE04G2736' => 'cde', 'CDE08G1161' => 'cde', 'CDE09G1238' => 'cde', 'Cfa000467' => 'cfa', 'Cfa000947' => 'cfa', 'Cfa004969' => 'cfa', 'Cfa005284' => 'cfa', 'Cfa008993' => 'cfa', 'Cfa018187' => 'cfa', 'Cfa018454' => 'cfa', 'Cfa020585' => 'cfa', 'Ciclev10000424m.g' => 'ccl', 'Ciclev10003605m.g' => 'ccl', 'Ciclev10007828m.g' => 'ccl', 'Ciclev10014620m.g' => 'ccl', 'Ciclev10015169m.g' => 'ccl', 'Ciclev10018291m.g' => 'ccl', 'Ciclev10028256m.g' => 'ccl', 'Ciclev10033822m.g' => 'ccl', 'CiPaw.05G060300' => 'cil', 'CiPaw.05G085000' => 'cil', 'CiPaw.06G083700' => 'cil', 'CiPaw.06G120300' => 'cil', 'CiPaw.09G060500' => 'cil', 'CiPaw.09G123800' => 'cil', 'CiPaw.11G169700' => 'cil', 'CiPaw.12G118300' => 'cil', 'CiPaw.15G071000' => 'cil', 'CiPaw.15G081900' => 'cil', 'ClCG01G024610' => 'cla', 'ClCG03G006070' => 'cla', 'ClCG05G019250' => 'cla', 'ClCG09G009500' => 'cla', 'ClCG11G008200' => 'cla', 'ClCG11G018080' => 'cla', 'COL.COLO4_17373' => 'col', 'COL.COLO4_22994' => 'col', 'COL.COLO4_26389' => 'col', 'COL.COLO4_27170' => 'col', 'COL.COLO4_31074' => 'col', 'COL.COLO4_31465' => 'col', 'COL.COLO4_36438' => 'col', 'COL.COLO4_36439' => 'col', 'Cpa.g.c38781' => 'cpa', 'Cpa.g.sc128.12' => 'cpa', 'Cpa.g.sc166.7' => 'cpa', 'Cpa.g.sc166.8' => 'cpa', 'Cpa.g.sc20.111' => 'cpa', 'Cpa.g.sc27.31' => 'cpa', 'Cpa.g.sc64.36' => 'cpa', 'Cpa.g.sc64.37' => 'cpa', 'Cpa.g.sc66.49' => 'cpa', 'Cpa.g.sc80.64' => 'cpa', 'CsaV3_1G012320' => 'csa', 'CsaV3_2G008480' => 'csa', 'CsaV3_2G033450' => 'csa', 'CsaV3_3G044830' => 'csa', 'CsaV3_4G033710' => 'csa', 'CsaV3_6G051730' => 'csa', 'CsaV3_7G025350' => 'csa', 'CSS0001067' => 'camsi', 'CSS0005996' => 'camsi', 'CSS0006590' => 'camsi', 'CSS0009673' => 'camsi', 'CSS0010201' => 'camsi', 'CSS0010549' => 'camsi', 'CSS0011364' => 'camsi', 'CSS0014473' => 'camsi', 'CSS0014961' => 'camsi', 'CSS0020191' => 'camsi', 'CSS0021165' => 'camsi', 'CSS0022306' => 'camsi', 'CSS0030591' => 'camsi', 'CSS0030696' => 'camsi', 'CSS0032653' => 'camsi', 'CSS0037487' => 'camsi', 'CSS0041102' => 'camsi', 'CSS0041261' => 'camsi', 'CSS0046246' => 'camsi', 'CSS0049256' => 'camsi', 'DCAR_004075' => 'dca', 'DCAR_011538' => 'dca', 'DCAR_019553' => 'dca', 'DCAR_020952' => 'dca', 'DCAR_021739' => 'dca', 'DCAR_027407' => 'dca', 'DCAR_027913' => 'dca', 'DCAR_028066' => 'dca', 'Dinv05899' => 'din', 'Dinv07563' => 'din', 'Dinv08010' => 'din', 'Dinv14125' => 'din', 'Dinv20172' => 'din', 'Dinv30743' => 'din', 'Dinv31229' => 'din', 'Dinv34162' => 'din', 'Dinv36028' => 'din', 'Dinv39368' => 'din', 'Dinv40565' => 'din', 'Dinv41706' => 'din', 'Duzib052G0089' => 'dzi', 'Duzib116G0641' => 'dzi', 'Duzib132G0069' => 'dzi', 'Duzib132G1219' => 'dzi', 'Duzib147G0278' => 'dzi', 'Duzib160G0480' => 'dzi', 'Duzib170G0661' => 'dzi', 'Duzib177G0591' => 'dzi', 'Duzib187G1353' => 'dzi', 'Duzib192G0858' => 'dzi', 'Duzib192G0883' => 'dzi', 'Duzib213G0506' => 'dzi', 'Duzib235G0289' => 'dzi', 'Duzib251G0422' => 'dzi', 'ECA232G3898' => 'eca', 'ECA233G5950' => 'eca', 'ECA234G1699' => 'eca', 'ECA234G2421' => 'eca', 'ECA236G0426' => 'eca', 'ECA236G4331' => 'eca', 'ECA248G2573' => 'eca', 'EL10Ac1g00077' => 'bvu', 'EL10Ac1g01746' => 'bvu', 'EL10Ac2g03464' => 'bvu', 'EL10Ac4g08176' => 'bvu', 'EL10Ac7g17521' => 'bvu', 'EL10Ac8g20386' => 'bvu', 'EL10Ac9g21343' => 'bvu', 'EL10Ac9g22688' => 'bvu', 'Eucgr.B03434' => 'egr', 'Eucgr.D00618' => 'egr', 'Eucgr.E02395' => 'egr', 'Eucgr.F01129' => 'egr', 'Eucgr.F02622' => 'egr', 'Eucgr.F04207' => 'egr', 'FAN01G0570' => 'fan', 'FAN03G3351' => 'fan', 'FAN06G3702' => 'fan', 'FAN07G2149' => 'fan', 'FAN10G3758' => 'fan', 'FAN11G1170' => 'fan', 'FAN11G2050' => 'fan', 'FAN11G2724' => 'fan', 'FAN12G1700' => 'fan', 'FAN12G2028' => 'fan', 'FAN15G1160' => 'fan', 'FAN15G3063' => 'fan', 'FAN16G2540' => 'fan', 'FAN16G3077' => 'fan', 'FAN16G3624' => 'fan', 'FAN17G0221' => 'fan', 'FAN20G2492' => 'fan', 'FAN20G2905' => 'fan', 'FAN21G0548' => 'fan', 'FAN21G1300' => 'fan', 'FAN22G0077' => 'fan', 'FAN22G1315' => 'fan', 'FAN24G1280' => 'fan', 'FAN24G1445' => 'fan', 'FAN24G3527' => 'fan', 'FAN25G0464' => 'fan', 'FAN25G2885' => 'fan', 'FAN25G3270' => 'fan', 'FAN27G1101' => 'fan', 'FAN27G2846' => 'fan', 'FAN27G3524' => 'fan', 'FvH4_2g11770' => 'fve', 'FvH4_2g15630' => 'fve', 'FvH4_3g05570' => 'fve', 'FvH4_3g09110' => 'fve', 'FvH4_3g19940' => 'fve', 'FvH4_4g04821' => 'fve', 'FvH4_4g31480' => 'fve', 'FvH4_7g01740' => 'fve', 'Glyma.05G130400' => 'gma', 'Glyma.05G156400' => 'gma', 'Glyma.07G197000' => 'gma', 'Glyma.08G085151' => 'gma', 'Glyma.08G114500' => 'gma', 'Glyma.08G300400' => 'gma', 'Glyma.10G215800' => 'gma', 'Glyma.12G224400' => 'gma', 'Glyma.13G179300' => 'gma', 'Glyma.13G218151' => 'gma', 'Glyma.13G238800' => 'gma', 'Glyma.13G276900' => 'gma', 'Glyma.14G078200' => 'gma', 'Glyma.15G074500' => 'gma', 'Glyma.15G094100' => 'gma', 'Glyma.17G247200' => 'gma', 'Glyma.18G120100' => 'gma', 'Glyma.20G176000' => 'gma', 'Gohir.A01G063600' => 'ghi', 'Gohir.A01G170301' => 'ghi', 'Gohir.A02G060500' => 'ghi', 'Gohir.A05G133850' => 'ghi', 'Gohir.A05G161400' => 'ghi', 'Gohir.A06G012900' => 'ghi', 'Gohir.A06G035901' => 'ghi', 'Gohir.A06G127100' => 'ghi', 'Gohir.A06G210500' => 'ghi', 'Gohir.A08G008650' => 'ghi', 'Gohir.A09G072700' => 'ghi', 'Gohir.A09G088301' => 'ghi', 'Gohir.A10G040600' => 'ghi', 'Gohir.A12G036300' => 'ghi', 'Gohir.A12G143350' => 'ghi', 'Gohir.A12G165500' => 'ghi', 'Gohir.A13G145700' => 'ghi', 'Gohir.D01G050000' => 'ghi', 'Gohir.D01G051366' => 'ghi', 'Gohir.D01G161350' => 'ghi', 'Gohir.D02G065900' => 'ghi', 'Gohir.D05G164200' => 'ghi', 'Gohir.D05G355500' => 'ghi', 'Gohir.D06G010400' => 'ghi', 'Gohir.D06G111250' => 'ghi', 'Gohir.D06G132000' => 'ghi', 'Gohir.D06G210500' => 'ghi', 'Gohir.D07G165675' => 'ghi', 'Gohir.D08G062240' => 'ghi', 'Gohir.D08G086101' => 'ghi', 'Gohir.D08G138060' => 'ghi', 'Gohir.D09G072300' => 'ghi', 'Gohir.D10G041400' => 'ghi', 'Gohir.D11G191020' => 'ghi', 'Gohir.D11G212066' => 'ghi', 'Gohir.D12G036300' => 'ghi', 'Gohir.D12G168600' => 'ghi', 'Gohir.D13G150600' => 'ghi', 'Gorai.001G057300' => 'gra', 'Gorai.002G069900' => 'gra', 'Gorai.002G200000' => 'gra', 'Gorai.003G067600' => 'gra', 'Gorai.005G074800' => 'gra', 'Gorai.006G087300' => 'gra', 'Gorai.008G037500' => 'gra', 'Gorai.008G181400' => 'gra', 'Gorai.009G169400' => 'gra', 'Gorai.009G387900' => 'gra', 'Gorai.010G013300' => 'gra', 'Gorai.010G153800' => 'gra', 'Gorai.010G255800' => 'gra', 'Gorai.011G043700' => 'gra', 'Gorai.011G198900' => 'gra', 'Gorai.013G168400' => 'gra', 'GSVIVG01005212001' => 'vvi', 'GSVIVG01006163001' => 'vvi', 'GSVIVG01009625001' => 'vvi', 'GSVIVG01014338001' => 'vvi', 'GSVIVG01020005001' => 'vvi', 'GSVIVG01021450001' => 'vvi', 'GSVIVG01023975001' => 'vvi', 'GSVIVG01034490001' => 'vvi', 'HanXRQChr04g0112071' => 'han', 'HanXRQChr05g0131151' => 'han', 'HanXRQChr09g0262371' => 'han', 'HanXRQChr09g0268401' => 'han', 'HanXRQChr10g0279241' => 'han', 'HanXRQChr10g0297961' => 'han', 'HanXRQChr11g0326231' => 'han', 'HanXRQChr11g0328471' => 'han', 'HanXRQChr16g0507941' => 'han', 'HanXRQChr17g0560211' => 'han', 'Haze_02108' => 'cav', 'Haze_02428' => 'cav', 'Haze_05593' => 'cav', 'Haze_06448' => 'cav', 'Haze_09427' => 'cav', 'Haze_12022' => 'cav', 'Haze_17612' => 'cav', 'Haze_17928' => 'cav', 'Hma1.2p1_0032F.1_g019250' => 'hma', 'Hma1.2p1_0163F.1_g072690' => 'hma', 'Hma1.2p1_0265F.1_g106710' => 'hma', 'Hma1.2p1_0286F.1_g113970' => 'hma', 'Hma1.2p1_0363F.1_g136640' => 'hma', 'Hma1.2p1_0584F.1_g183470' => 'hma', 'Hma1.2p1_0885F.1_g232570' => 'hma', 'HPP92_006022' => 'vpl', 'HPP92_007320' => 'vpl', 'HPP92_011521' => 'vpl', 'HPP92_019387' => 'vpl', 'HPP92_024038' => 'vpl', 'Hund05891' => 'sun', 'Hund06450' => 'sun', 'Hund12053' => 'sun', 'Hund16800' => 'sun', 'Hund21222' => 'sun', 'Hund22896' => 'sun', 'Hund23746' => 'sun', 'Hund27083' => 'sun', 'Lalb_Chr02g0141831' => 'lal', 'Lalb_Chr02g0141841' => 'lal', 'Lalb_Chr05g0220411' => 'lal', 'Lalb_Chr06g0162081' => 'lal', 'Lalb_Chr09g0327651' => 'lal', 'Lalb_Chr13g0295051' => 'lal', 'Lalb_Chr15g0086801' => 'lal', 'Lalb_Chr16g0383781' => 'lal', 'Lalb_Chr16g0383791' => 'lal', 'Lalb_Chr18g0055441' => 'lal', 'Lalb_Chr18g0059611' => 'lal', 'Lalb_Chr20g0109661' => 'lal', 'Lalb_Chr20g0109831' => 'lal', 'Lalb_Chr20g0121871' => 'lal', 'Lalb_Chr22g0355361' => 'lal', 'Lalb_Chr25g0286371' => 'lal', 'Lj1A1187G43' => 'lonja', 'Lj1A1205T50' => 'lonja', 'Lj1A800G33' => 'lonja', 'Lj1C1187T7' => 'lonja', 'Lj1C843T11' => 'lonja', 'Lj1g0010940' => 'lja', 'Lj2A288T69' => 'lonja', 'Lj3g0024276' => 'lja', 'Lj4A47T76' => 'lonja', 'Lj4g0005805' => 'lja', 'Lj4g0006097' => 'lja', 'Lj4g0008528' => 'lja', 'Lj4g0024907' => 'lja', 'Lj5g0012472' => 'lja', 'Lj5g0018648' => 'lja', 'Lj6C789G1' => 'lonja', 'Lj6g0004000' => 'lja', 'Lj7A292G67' => 'lonja', 'Lj7A292T64' => 'lonja', 'Lj9A400T58' => 'lonja', 'Lsat_1_v5_gn_1_126181' => 'lsa', 'Lsat_1_v5_gn_4_123041' => 'lsa', 'Lsat_1_v5_gn_4_133620' => 'lsa', 'Lsat_1_v5_gn_4_53221' => 'lsa', 'Lsat_1_v5_gn_4_71961' => 'lsa', 'Lsat_1_v5_gn_7_105241' => 'lsa', 'Lsat_1_v5_gn_7_21361' => 'lsa', 'Lsat_1_v5_gn_7_28860' => 'lsa', 'Lsat_1_v5_gn_7_31260' => 'lsa', 'Lsat_1_v5_gn_8_52801' => 'lsa', 'Manes.02G191400' => 'mes', 'Manes.03G110100' => 'mes', 'Manes.04G071100' => 'mes', 'Manes.05G100500' => 'mes', 'Manes.05G164700' => 'mes', 'Manes.15G087000' => 'mes', 'Manes.15G121500' => 'mes', 'Manes.16G028300' => 'mes', 'Manes.17G046100' => 'mes', 'Manes.17G069800' => 'mes', 'Manes.18G100500' => 'mes', 'Mapoly0002s0109' => 'mpo', 'Mapoly0024s0007' => 'mpo', 'Mapoly0089s0032' => 'mpo', 'MBI04_g42241_MAGBIO' => 'mbi', 'MBI05_g11988_MAGBIO' => 'mbi', 'MBI05_g35452_MAGBIO' => 'mbi', 'MBI07_g30179_MAGBIO' => 'mbi', 'MBI07_g35859_MAGBIO' => 'mbi', 'MBI07_g35860_MAGBIO' => 'mbi', 'MBI07_g37166_MAGBIO' => 'mbi', 'MBI08_g18172_MAGBIO' => 'mbi', 'MBI09_g08441_MAGBIO' => 'mbi', 'MBI13_g01676_MAGBIO' => 'mbi', 'MBI14_g42955_MAGBIO' => 'mbi', 'MBI16_g13161_MAGBIO' => 'mbi', 'MBI17_g27204_MAGBIO' => 'mbi', 'MBI19_g21595_MAGBIO' => 'mbi', 'MD00G1148400' => 'mdo', 'MD02G1301200' => 'mdo', 'MD03G1227800' => 'mdo', 'MD05G1041100' => 'mdo', 'MD05G1124800' => 'mdo', 'MD05G1284000' => 'mdo', 'MD05G1338800' => 'mdo', 'MD05G1338900' => 'mdo', 'MD07G1022800' => 'mdo', 'MD10G1047500' => 'mdo', 'MD10G1127500' => 'mdo', 'MD10G1262300' => 'mdo', 'MD10G1293800' => 'mdo', 'MD16G1074300' => 'mdo', 'Medtr1g021670' => 'mtr', 'Medtr1g096320' => 'mtr', 'Medtr2g013690' => 'mtr', 'Medtr2g019450' => 'mtr', 'Medtr2g085170' => 'mtr', 'Medtr4g088785' => 'mtr', 'Medtr8g055930' => 'mtr', 'Medtr8g085850' => 'mtr', 'MELO3C002605.2' => 'cme', 'MELO3C003891.2' => 'cme', 'MELO3C004012.2' => 'cme', 'MELO3C007134.2' => 'cme', 'MELO3C008118.2' => 'cme', 'MELO3C016700.2' => 'cme', 'MELO3C024127.2' => 'cme', 'MELO3C033361.2' => 'cme', 'MELO3C033362.2' => 'cme', 'Migut.C00430' => 'egut', 'Migut.C01246' => 'egut', 'Migut.E00101' => 'egut', 'Migut.H01486' => 'egut', 'Migut.H01939' => 'egut', 'Migut.K00360' => 'egut', 'Migut.M00910' => 'egut', 'Migut.M01139' => 'egut', 'Migut.N02677' => 'egut', 'MSTRG.13252' => 'ama', 'MSTRG.14701' => 'ama', 'MSTRG.1521' => 'ama', 'MSTRG.15884' => 'ama', 'MSTRG.16242' => 'ama', 'MSTRG.22285' => 'ama', 'MSTRG.22444' => 'ama', 'MSTRG.2349' => 'ama', 'MSTRG.26308' => 'ama', 'MSTRG.28296' => 'ama', 'MSTRG.9895' => 'ama', 'Nitab4.5_0000110g0060' => 'nta', 'Nitab4.5_0000420g0130' => 'nta', 'Nitab4.5_0000422g0030' => 'nta', 'Nitab4.5_0000560g0180' => 'nta', 'Nitab4.5_0000703g0100' => 'nta', 'Nitab4.5_0000786g0200' => 'nta', 'Nitab4.5_0001336g0020' => 'nta', 'Nitab4.5_0001796g0030' => 'nta', 'Nitab4.5_0003348g0060' => 'nta', 'Nitab4.5_0003698g0040' => 'nta', 'Nitab4.5_0003942g0090' => 'nta', 'Nitab4.5_0004775g0070' => 'nta', 'Nitab4.5_0004864g0030' => 'nta', 'Nitab4.5_0005615g0020' => 'nta', 'Nitab4.5_0009288g0030' => 'nta', 'Nitab4.5_0009341g0010' => 'nta', 'Nitab4.5_0009535g0010' => 'nta', 'Nn1g03995' => 'nnu', 'Nn1g04100' => 'nnu', 'Nn1g06530' => 'nnu', 'Nn3g16404' => 'nnu', 'Nn3g17212' => 'nnu', 'Nn3g20776' => 'nnu', 'Nn3g21923' => 'nnu', 'Nn5g27737' => 'nnu', 'Nn5g29461' => 'nnu', 'Nn7g38355' => 'nnu', 'Nn8g39873' => 'nnu', 'Oeu000548.2' => 'oeu', 'Oeu004672.1' => 'oeu', 'Oeu015605.2' => 'oeu', 'Oeu016092.1' => 'oeu', 'Oeu017879.3' => 'oeu', 'Oeu024910.1' => 'oeu', 'Oeu028965.1' => 'oeu', 'Oeu031269.1' => 'oeu', 'Oeu031270.1' => 'oeu', 'Oeu032535.1' => 'oeu', 'Oeu034151.1' => 'oeu', 'Oeu034152.1' => 'oeu', 'Oeu034588.2' => 'oeu', 'Oeu050846.1' => 'oeu', 'Oeu050849.2' => 'oeu', 'Oeu051063.2' => 'oeu', 'Oeu052368.1' => 'oeu', 'Oeu052370.1' => 'oeu', 'Os01g0210400' => 'osa', 'Os01g0304300' => 'osa', 'Os01g0749100' => 'osa', 'Os02g0745800' => 'osa', 'Os03g0769050' => 'osa', 'Os05g0531500' => 'osa', 'Os06g0724300' => 'osa', 'Os11g0198100' => 'osa', 'Peaxi162Scf00069g01425' => 'pax', 'Peaxi162Scf00280g00811' => 'pax', 'Peaxi162Scf00310g00615' => 'pax', 'Peaxi162Scf00362g00542' => 'pax', 'Peaxi162Scf00461g00310' => 'pax', 'Peaxi162Scf00530g00118' => 'pax', 'Peaxi162Scf00541g00057' => 'pax', 'Peaxi162Scf00661g00017' => 'pax', 'Peaxi162Scf00926g00027' => 'pax', 'Peaxi162Scf01064g00263' => 'pax', 'Peaxi162Scf01211g00135' => 'pax', 'PGR004G2336' => 'pgr', 'PGR042G0327' => 'pgr', 'PGR042G1957' => 'pgr', 'PGR042G2003' => 'pgr', 'PGR042G3929' => 'pgr', 'PGR083G1137' => 'pgr', 'PGR083G1364' => 'pgr', 'PGSC0003DMG400003381' => 'stu', 'PGSC0003DMG400003417' => 'stu', 'PGSC0003DMG400008981' => 'stu', 'PGSC0003DMG400012417' => 'stu', 'PGSC0003DMG400012823' => 'stu', 'PGSC0003DMG400016885' => 'stu', 'PGSC0003DMG400022812' => 'stu', 'PGSC0003DMG400029726' => 'stu', 'PGSC0003DMG401009243' => 'stu', 'PGSC0003DMG401031505' => 'stu', 'PGSC0003DMG402031505' => 'stu', 'Phvul.001G017600' => 'pvu', 'Phvul.002G193500' => 'pvu', 'Phvul.002G228900' => 'pvu', 'Phvul.002G236800' => 'pvu', 'Phvul.003G049500' => 'pvu', 'Phvul.005G072000' => 'pvu', 'Phvul.006G164800' => 'pvu', 'Phvul.006G185100' => 'pvu', 'Phvul.007G090000' => 'pvu', 'Potri.001G399800' => 'ptr', 'Potri.002G149900' => 'ptr', 'Potri.004G044100' => 'ptr', 'Potri.004G177600' => 'ptr', 'Potri.009G138000' => 'ptr', 'Potri.010G094000' => 'ptr', 'Potri.011G053000' => 'ptr', 'Potri.011G119300' => 'ptr', 'Potri.013G113700' => 'ptr', 'Potri.018G107800' => 'ptr', 'Potri.019G084100' => 'ptr', 'Pp3c14_23720' => 'ppa', 'Pp3c16_6340' => 'ppa', 'Pp3c23_13420' => 'ppa', 'Pp3c24_2740' => 'ppa', 'Pp3c25_860' => 'ppa', 'Pp3c8_21750' => 'ppa', 'Prupe.1G273000' => 'ppe', 'Prupe.1G273700' => 'ppe', 'Prupe.1G274100' => 'ppe', 'Prupe.2G023300' => 'ppe', 'Prupe.4G048000' => 'ppe', 'Prupe.4G080400' => 'ppe', 'Prupe.4G181200' => 'ppe', 'Prupe.8G056900' => 'ppe', 'Prupe.8G168700' => 'ppe', 'Psat1g189080' => 'psa', 'Psat1g204760' => 'psa', 'Psat4g175560' => 'psa', 'Psat4g177720' => 'psa', 'Psat5g244240' => 'psa', 'Psat6g010720' => 'psa', 'Psat6g187200' => 'psa', 'Psat7g072040' => 'psa', 'PSO017G3501' => 'pso', 'PSO063G2148' => 'pso', 'PSO063G5608' => 'pso', 'PSO210G6392' => 'pso', 'PSO541G2319' => 'pso', 'PSO541G2836' => 'pso', 'PSO541G4012' => 'pso', 'PSO541G6253' => 'pso', 'PSO675G0580' => 'pso', 'PSO675G0856' => 'pso', 'PSO675G5635' => 'pso', 'PSO675G9157' => 'pso', 'PSO832G1660' => 'pso', 'PSO832G1969' => 'pso', 'QL02p007186' => 'qlo', 'QL02p033904' => 'qlo', 'QL03p064391' => 'qlo', 'QL05p040593' => 'qlo', 'QL05p058242' => 'qlo', 'QL08p021825' => 'qlo', 'QL11p004981' => 'qlo', 'RcHm_v2.0_Chr1g0318301' => 'rch', 'RcHm_v2.0_Chr4g0418501' => 'rch', 'RcHm_v2.0_Chr4g0439971' => 'rch', 'RcHm_v2.0_Chr5g0008541' => 'rch', 'RcHm_v2.0_Chr5g0014101' => 'rch', 'RcHm_v2.0_Chr5g0014131' => 'rch', 'RcHm_v2.0_Chr5g0033621' => 'rch', 'RcHm_v2.0_Chr6g0272041' => 'rch', 'RcHm_v2.0_Chr6g0278831' => 'rch', 'Rhsim02G0130400' => 'rsi', 'Rhsim02G0171100' => 'rsi', 'Rhsim05G0053000' => 'rsi', 'Rhsim05G0053100' => 'rsi', 'Rhsim06G0096500' => 'rsi', 'Rhsim06G0096600' => 'rsi', 'Rhsim06G0199100' => 'rsi', 'Rhsim12G0062300' => 'rsi', 'Rhsim12G0062800' => 'rsi', 'Sabra02G0118600' => 'sbr', 'Sabra04G0027300' => 'sbr', 'Sabra04G0119500' => 'sbr', 'Sabra08G0112500' => 'sbr', 'Sabra11G0036800' => 'sbr', 'Sabra11G0103800' => 'sbr', 'Sabra13G0096300' => 'sbr', 'Sabra16G0262300' => 'sbr', 'Sabra18G0091700' => 'sbr', 'Sabra19G0095400' => 'sbr', 'SalBow6G3080' => 'sbo', 'SalBow7G1157' => 'sbo', 'SalBow7G2123' => 'sbo', 'SalBow7G2285' => 'sbo', 'SalBow7G3537' => 'sbo', 'SalBow8G2947' => 'sbo', 'SalBow8G4463' => 'sbo', 'SalBow8G5466' => 'sbo', 'Sc01g0001750' => 'sci', 'Sc02g0006640' => 'sci', 'Sc02g0006670' => 'sci', 'Sc04g0008220' => 'sci', 'Sc05g0006190' => 'sci', 'Sc08g0002760' => 'sci', 'Sc17g0006170' => 'sci', 'Sc22g0002050' => 'sci', 'Sc23g0001190' => 'sci', 'Sc24g0000980' => 'sci', 'Sed0006245' => 'sed', 'Sed0007543' => 'sed', 'Sed0009411' => 'sed', 'Sed0010765' => 'sed', 'Sed0012944' => 'sed', 'Sed0014682' => 'sed', 'Sed0016174' => 'sed', 'Sed0016796' => 'sed', 'Sed0020317' => 'sed', 'Sed0021467' => 'sed', 'SEGI_01316' => 'sgi', 'SEGI_03374' => 'sgi', 'SEGI_16265' => 'sgi', 'SEGI_18569' => 'sgi', 'SEGI_20351' => 'sgi', 'SEGI_26395' => 'sgi', 'SEGI_29469' => 'sgi', 'SEGI_34771' => 'sgi', 'SEGI_36769' => 'sgi', 'SEGI_37139' => 'sgi', 'SGA_v2.0_scaffold100G29687' => 'sas', 'SGA_v2.0_scaffold118G32472' => 'sas', 'SGA_v2.0_scaffold14G07051' => 'sas', 'SGA_v2.0_scaffold183G39845' => 'sas', 'SGA_v2.0_scaffold1G00174' => 'sas', 'SGA_v2.0_scaffold22G09714' => 'sas', 'SGA_v2.0_scaffold333G48992' => 'sas', 'SGA_v2.0_scaffold46G17491' => 'sas', 'SGA_v2.0_scaffold49G18294' => 'sas', 'SGA_v2.0_scaffold63G21658' => 'sas', 'SHI01741' => 'shi', 'SHI05771' => 'shi', 'SHI18077' => 'shi', 'SHI20525' => 'shi', 'SHI20527' => 'shi', 'SHI20528' => 'shi', 'SMO172G0185' => 'smo', 'SMO198G0020' => 'smo', 'SMO351G0006' => 'smo', 'SMO356G0118' => 'smo', 'SMO358G0296' => 'smo', 'SMO367G0079' => 'smo', 'SMO367G1277' => 'smo', 'Solyc01g014220.3' => 'sly', 'Solyc01g111770.2' => 'sly', 'Solyc02g078180.3' => 'sly', 'Solyc03g006430.3' => 'sly', 'Solyc03g006456.1' => 'sly', 'Solyc03g079860.2' => 'sly', 'Solyc04g079770.3' => 'sly', 'Solyc05g007430.4' => 'sly', 'Solyc07g063150.3' => 'sly', 'Solyc08g016620.3' => 'sly', 'Solyc09g057590.3' => 'sly', 'Solyc09g057600.1' => 'sly', 'Solyc10g009050.3' => 'sly', 'Solyc11g017420.2' => 'sly', 'Sopen01g053810' => 'spe', 'Sopen02g023040' => 'spe', 'Sopen03g002440' => 'spe', 'Sopen04g033350' => 'spe', 'Sopen05g003310' => 'spe', 'Sopen07g004050' => 'spe', 'Sopen07g031340' => 'spe', 'Sopen08g006990' => 'spe', 'Sopen10g004830' => 'spe', 'Sopen11g009370' => 'spe', 'Sp1g24450' => 'spa', 'Sp1g29670' => 'spa', 'Sp1g39600' => 'spa', 'Sp2g11080' => 'spa', 'Sp2g13970' => 'spa', 'Sp4g16130' => 'spa', 'Sp6g13080' => 'spa', 'Sp7g37270' => 'spa', 'TAR371G0065' => 'tar', 'TAR376G0340' => 'tar', 'TAR376G0435' => 'tar', 'TAR381G0002' => 'tar', 'TAR381G1236' => 'tar', 'TAR624G0055' => 'tar', 'TAR624G0324' => 'tar', 'TAR624G0696' => 'tar', 'TAR624G0906' => 'tar', 'TAR625G0107' => 'tar', 'TAR626G0015' => 'tar', 'TAR626G1356' => 'tar', 'TAR627G0888' => 'tar', 'TAR628G0399' => 'tar', 'TAR628G1327' => 'tar', 'TAR629G2831' => 'tar', 'TAR629G2874' => 'tar', 'TAR633G1432' => 'tar', 'TAR633G2771' => 'tar', 'THA.LOC104803394' => 'tha', 'THA.LOC104805153' => 'tha', 'THA.LOC104806784' => 'tha', 'THA.LOC104810473' => 'tha', 'THA.LOC104813100' => 'tha', 'THA.LOC104814215' => 'tha', 'THA.LOC104815554' => 'tha', 'THA.LOC104820544' => 'tha', 'THA.LOC104824754' => 'tha', 'THA.LOC104827717' => 'tha', 'Thecc.02G031400' => 'tca', 'Thecc.02G055900' => 'tca', 'Thecc.02G350800' => 'tca', 'Thecc.06G150900' => 'tca', 'Thecc.06G186600' => 'tca', 'Thecc.07G089600' => 'tca', 'Thecc.08G020400' => 'tca', 'Thecc.08G182100' => 'tca', 'Thhalv10000873m.g' => 'esa', 'Thhalv10004185m.g' => 'esa', 'Thhalv10006981m.g' => 'esa', 'Thhalv10007204m.g' => 'esa', 'Thhalv10011374m.g' => 'esa', 'Thhalv10013482m.g' => 'esa', 'Thhalv10017801m.g' => 'esa', 'Thhalv10024983m.g' => 'esa', 'TPR.G12072' => 'tpr', 'TPR.G15769' => 'tpr', 'TPR.G16504' => 'tpr', 'TPR.G16506' => 'tpr', 'TPR.G24345' => 'tpr', 'TPR.G26666' => 'tpr', 'TPR.G27320' => 'tpr', 'TPR.G31819' => 'tpr', 'TPR.G38879' => 'tpr', 'TPR.G39015' => 'tpr', 'TPR.G8819' => 'tpr', 'TWI09G0924' => 'twi', 'TWI12G0811' => 'twi', 'TWI12G1294' => 'twi', 'TWI31G0150' => 'twi', 'TWI36G1262' => 'twi', 'TWI38G1287' => 'twi', 'TWI38G1633' => 'twi', 'TWI38G1982' => 'twi', 'TWI39G0116' => 'twi', 'TWI60G1011' => 'twi', 'TWI63G0171' => 'twi', 'TWI73G0839' => 'twi', 'TWI79G1511' => 'twi', 'unitig_0.g915' => 'ugi', 'unitig_0.g916' => 'ugi', 'unitig_21.g20219' => 'ugi', 'unitig_21.g20416' => 'ugi', 'unitig_578.g16132' => 'ugi', 'unitig_578.g16718' => 'ugi', 'unitig_62.g23481' => 'ugi', 'unitig_744.g24535' => 'ugi', 'unitig_749.g13525' => 'ugi', 'vmacro01248' => 'vma', 'vmacro02290' => 'vma', 'vmacro10946' => 'vma', 'vmacro11865' => 'vma', 'vmacro12493' => 'vma', 'vmacro17322' => 'vma', 'vmacro21599' => 'vma', 'vmacro23041' => 'vma', 'VMungo0251G0004' => 'vmu', 'VMungo0251G2639' => 'vmu', 'VMungo0251G2967' => 'vmu', 'VMungo0540G0864' => 'vmu', 'VMungo0540G1569' => 'vmu', 'VMungo0647G0317' => 'vmu', 'VMungo0720G1373' => 'vmu', 'VMungo0720G1508' => 'vmu', 'VMungo1080G0485' => 'vmu', 'VMungo1215G3177' => 'vmu', 'Zm00001eb112600' => 'zma', 'Zm00001eb120220' => 'zma', 'Zm00001eb153240' => 'zma', 'Zm00001eb168880' => 'zma', 'Zm00001eb213920' => 'zma', 'Zm00001eb228280' => 'zma', 'Zm00001eb254580' => 'zma', 'Zm00001eb272180' => 'zma', 'Zm00001eb293190' => 'zma', 'Zm00001eb322930' => 'zma', 'Zm00001eb353360' => 'zma', 'Zm00001eb353390' => 'zma', 'Zm00001eb353430' => 'zma', 'Zm00001eb353440' => 'zma', 'Zm00001eb353780' => 'zma' ) $gf_id = 'HOM05D000499' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000499' ) $data_identifier = 'HOM05D000499' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 29, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 12, 'amhyb' => (int) 8, 'aly' => (int) 12, 'aox' => (int) 9, 'arhy' => (int) 26, 'ath' => (int) 8, 'atr' => (int) 7, 'acertr' => (int) 10, 'cqu' => (int) 15, 'bca' => (int) 29, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 11, 'cansat' => (int) 8, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 9, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 8, 'cpa' => (int) 10, 'csa' => (int) 7, 'camsi' => (int) 20, 'dca' => (int) 8, 'din' => (int) 12, 'dzi' => (int) 14, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 6, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 38, 'gra' => (int) 16, 'vvi' => (int) 8, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 5, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 11, 'lja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 11, 'mpo' => (int) 3, 'mbi' => (int) 14, 'mdo' => (int) 14, 'mtr' => (int) 8, 'cme' => (int) 9, 'egut' => (int) 9, 'ama' => (int) 11, 'nta' => (int) 17, 'nnu' => (int) 11, 'oeu' => (int) 18, 'osa' => (int) 8, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 6, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 9, 'rsi' => (int) 9, 'sbr' => (int) 10, 'sbo' => (int) 8, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 10, 'sas' => (int) 10, 'shi' => (int) 6, 'smo' => (int) 7, 'sly' => (int) 14, 'spe' => (int) 10, 'spa' => (int) 8, 'tar' => (int) 19, 'tha' => (int) 10, 'tca' => (int) 8, 'esa' => (int) 8, 'tpr' => (int) 11, 'twi' => (int) 13, 'ugi' => (int) 9, 'vma' => (int) 8, 'vmu' => (int) 10, 'zma' => (int) 15 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb353780' $species_info = array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ) $local_species = 'qlo' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000499', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1066', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p29780' => 'bna', 'A02p33180' => 'bna', 'A03p16470' => 'bna', 'A03p66010' => 'bna', 'A04p25970' => 'bna', 'A06p01270' => 'bna', 'A06p46080' => 'bna', 'A07p11400' => 'bna', 'A08p01840' => 'bna', 'A08p08230' => 'bna', 'A08p25740' => 'bna', 'A09p32070' => 'bna', 'A09p37830' => 'bna', 'A09p42840' => 'bna', 'A09p42850' => 'bna', 'Aa31LG10G2060' => 'aar', 'Aa31LG2G7410' => 'aar', 'Aa31LG6G10200' => 'aar', 'Aa31LG6G16680' => 'aar', 'Aa31LG6G8470' => 'aar', 'Aa31LG9G12730' => 'aar', 'Aa31LG9G13680' => 'aar', 'Aa31LG9G14920' => 'aar', 'Aa31LG9G6650' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4977' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5467' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3254' => 'aag', 'Actinidia02578' => 'ach', 'Actinidia07693' => 'ach', 'Actinidia08413' => 'ach', 'Actinidia08414' => 'ach', 'Actinidia15289' => 'ach', 'Actinidia19871' => 'ach', 'Actinidia21475' => 'ach', 'Actinidia22576' => 'ach', 'Actinidia28327' => 'ach', 'Actinidia32491' => 'ach', 'Actinidia39463' => 'ach', 'Actinidia39571' => 'ach', 'Ah.01g013750' => 'amhyb', 'Ah.01g023210' => 'amhyb', 'Ah.04g164850' => 'amhyb', 'Ah.05g178060' => 'amhyb', 'Ah.07g204270' => 'amhyb', 'Ah.07g208480' => 'amhyb', 'Ah.09g237410' => 'amhyb', 'Ah.14g089460' => 'amhyb', 'AL1G41790' => 'aly', 'AL1G49050' => 'aly', 'AL1G53810' => 'aly', 'AL1G61400' => 'aly', 'AL4G18580' => 'aly', 'AL5G12510' => 'aly', 'AL5G12540' => 'aly', 'AL6G43230' => 'aly', 'AL7G10370' => 'aly', 'AL7G19250' => 'aly', 'AL8G12240' => 'aly', 'AL8G18540' => 'aly', 'Aqoxy1G02409' => 'aox', 'Aqoxy2G03993' => 'aox', 'Aqoxy3G03357' => 'aox', 'Aqoxy4G00785' => 'aox', 'Aqoxy5G02598' => 'aox', 'Aqoxy6G00132' => 'aox', 'Aqoxy7G01776' => 'aox', 'Aqoxy7G02316' => 'aox', 'Aqoxy7G03973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.12AFKW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B8730' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27IQR1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3F75VG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3RE0GA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41TCQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.527VTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FIR39' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5W8UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DA38EV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ63HS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H1I32C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HC27T5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4M8AP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7N3CZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9UVDZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LS1NQA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT1D4B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SKC4TM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCFV76' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF9Q1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQWD9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1ZM88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WE07RT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YCK7VH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJE6Q6' => 'arhy', 'AT1G28240' => 'ath', 'AT1G34550' => 'ath', 'AT1G53040' => 'ath', 'AT2G02910' => 'ath', 'AT4G09630' => 'ath', 'AT4G38500' => 'ath', 'AT5G42660' => 'ath', 'AT5G46220' => 'ath', 'ATR0152G026' => 'atr', 'ATR0564G343' => 'atr', 'ATR0706G151' => 'atr', 'ATR0733G207' => 'atr', 'ATR0751G234' => 'atr', 'ATR0807G048' => 'atr', 'ATR1091G084' => 'atr', 'Atru.chr10.1229' => 'acertr', 'Atru.chr10.1230' => 'acertr', 'Atru.chr10.1874' => 'acertr', 'Atru.chr11.1808' => 'acertr', 'Atru.chr13.1795' => 'acertr', 'Atru.chr13.570' => 'acertr', 'Atru.chr2.2608' => 'acertr', 'Atru.chr2.2609' => 'acertr', 'Atru.chr5.3428' => 'acertr', 'Atru.chr8.1171' => 'acertr', 'AUR62004651' => 'cqu', 'AUR62008675' => 'cqu', 'AUR62010014' => 'cqu', 'AUR62013004' => 'cqu', 'AUR62014825' => 'cqu', 'AUR62015015' => 'cqu', 'AUR62015151' => 'cqu', 'AUR62017020' => 'cqu', 'AUR62019422' => 'cqu', 'AUR62023570' => 'cqu', 'AUR62025571' => 'cqu', 'AUR62029098' => 'cqu', 'AUR62033863' => 'cqu', 'AUR62034296' => 'cqu', 'AUR62040075' => 'cqu', 'BcaB02g07334' => 'bca', 'BcaB02g10575' => 'bca', 'BcaB03g12119' => 'bca', 'BcaB03g12120' => 'bca', 'BcaB03g13945' => 'bca', 'BcaB04g17123' => 'bca', 'BcaB04g17867' => 'bca', 'BcaB04g19839' => 'bca', 'BcaB07g30317' => 'bca', 'BcaB07g32432' => 'bca', 'BcaB07g33362' => 'bca', 'BcaB08g36611' => 'bca', 'BcaC01g00028' => 'bca', 'BcaC01g01356' => 'bca', 'BcaC01g02034' => 'bca', 'BcaC01g06051' => 'bca', 'BcaC03g16839' => 'bca', 'BcaC03g17176' => 'bca', 'BcaC05g26829' => 'bca', 'BcaC06g31490' => 'bca', 'BcaC06g35344' => 'bca', 'BcaC06g36570' => 'bca', 'BcaC07g37537' => 'bca', 'BcaC08g43491' => 'bca', 'BcaC08g43773' => 'bca', 'BcaNung00234' => 'bca', 'BcaNung01982' => 'bca', 'BcaNung03707' => 'bca', 'BcaNung06454' => 'bca', 'BolC2t10762H' => 'bol', 'BolC2t11191H' => 'bol', 'BolC3t14322H' => 'bol', 'BolC3t19747H' => 'bol', 'BolC3t21425H' => 'bol', 'BolC4t27800H' => 'bol', 'BolC5t31423H' => 'bol', 'BolC6t35951H' => 'bol', 'BolC6t36282H' => 'bol', 'BolC7t40678H' => 'bol', 'BolC7t40679H' => 'bol', 'BolC7t42222H' => 'bol', 'BolC7t43492H' => 'bol', 'BolC7t46785H' => 'bol', 'BolC8t47853H' => 'bol', 'BolC9t56805H' => 'bol', 'BraA02t08000Z' => 'bra', 'BraA02t08341Z' => 'bra', 'BraA03t10936Z' => 'bra', 'BraA03t15657Z' => 'bra', 'BraA04t18100Z' => 'bra', 'BraA05t20523Z' => 'bra', 'BraA06t23353Z' => 'bra', 'BraA06t27473Z' => 'bra', 'BraA06t27769Z' => 'bra', 'BraA07t28928Z' => 'bra', 'BraA08t32236Z' => 'bra', 'BraA08t32841Z' => 'bra', 'BraA08t34524Z' => 'bra', 'BraA09t38742Z' => 'bra', 'BraA09t39295Z' => 'bra', 'C02p47180' => 'bna', 'C02p50990' => 'bna', 'C03p19360' => 'bna', 'C03p74950' => 'bna', 'C03p91000' => 'bna', 'C04p63260' => 'bna', 'C05p27050' => 'bna', 'C06p08750' => 'bna', 'C06p11490' => 'bna', 'C07p02820' => 'bna', 'C07p17180' => 'bna', 'C07p29440' => 'bna', 'C07p63730' => 'bna', 'C09p39260' => 'bna', 'CAN.G1164.34' => 'can', 'CAN.G1164.39' => 'can', 'CAN.G1530.3' => 'can', 'CAN.G162.61' => 'can', 'CAN.G176.6' => 'can', 'CAN.G289.49' => 'can', 'CAN.G370.21' => 'can', 'CAN.G370.22' => 'can', 'CAN.G371.117' => 'can', 'CAN.G58.37' => 'can', 'CAN.G588.98' => 'can', 'CANSAT21G2266' => 'cansat', 'CANSAT25G2799' => 'cansat', 'CANSAT35G0862' => 'cansat', 'CANSAT35G1704' => 'cansat', 'CANSAT35G1760' => 'cansat', 'CANSAT56G3971' => 'cansat', 'CANSAT56G4116' => 'cansat', 'CANSAT80G1259' => 'cansat', 'CARHR027730' => 'chi', 'CARHR033880' => 'chi', 'CARHR043270' => 'chi', 'CARHR145330' => 'chi', 'CARHR145340' => 'chi', 'CARHR175570' => 'chi', 'CARHR181570' => 'chi', 'CARHR258470' => 'chi', 'CARHR260490' => 'chi', 'CARHR294220' => 'chi', 'Carub.0001s2668' => 'cru', 'Carub.0001s3257' => 'cru', 'Carub.0001s4220' => 'cru', 'Carub.0005s0179' => 'cru', 'Carub.0006s2807' => 'cru', 'Carub.0007s0039' => 'cru', 'Carub.0008s0169' => 'cru', 'Carub.0008s0636' => 'cru', 'Ca_00338_v3' => 'car', 'Ca_00542_v3' => 'car', 'Ca_01844_v3' => 'car', 'Ca_10611_v3' => 'car', 'Ca_13326_v3' => 'car', 'Ca_17944_v3' => 'car', 'Ca_18546_v3' => 'car', 'Ca_24219_v3' => 'car', 'Ca_29972_v3' => 'car', 'CBR_g3681' => 'cbr', 'CBR_g40021' => 'cbr', 'Cc01_g08140' => 'ccan', 'Cc02_g13410' => 'ccan', 'Cc02_g37480' => 'ccan', 'Cc05_g12030' => 'ccan', 'Cc09_g03370' => 'ccan', 'Cc09_g10300' => 'ccan', 'Cc10_g03530' => 'ccan', 'Cc10_g11380' => 'ccan', 'CDE01G0176' => 'cde', 'CDE02G0675' => 'cde', 'CDE02G0942' => 'cde', 'CDE02G1153' => 'cde', 'CDE02G4177' => 'cde', 'CDE04G2117' => 'cde', 'CDE04G2736' => 'cde', 'CDE08G1161' => 'cde', 'CDE09G1238' => 'cde', 'Cfa000467' => 'cfa', 'Cfa000947' => 'cfa', 'Cfa004969' => 'cfa', 'Cfa005284' => 'cfa', 'Cfa008993' => 'cfa', 'Cfa018187' => 'cfa', 'Cfa018454' => 'cfa', 'Cfa020585' => 'cfa', 'Ciclev10000424m.g' => 'ccl', 'Ciclev10003605m.g' => 'ccl', 'Ciclev10007828m.g' => 'ccl', 'Ciclev10014620m.g' => 'ccl', 'Ciclev10015169m.g' => 'ccl', 'Ciclev10018291m.g' => 'ccl', 'Ciclev10028256m.g' => 'ccl', 'Ciclev10033822m.g' => 'ccl', 'CiPaw.05G060300' => 'cil', 'CiPaw.05G085000' => 'cil', 'CiPaw.06G083700' => 'cil', 'CiPaw.06G120300' => 'cil', 'CiPaw.09G060500' => 'cil', 'CiPaw.09G123800' => 'cil', 'CiPaw.11G169700' => 'cil', 'CiPaw.12G118300' => 'cil', 'CiPaw.15G071000' => 'cil', 'CiPaw.15G081900' => 'cil', 'ClCG01G024610' => 'cla', 'ClCG03G006070' => 'cla', 'ClCG05G019250' => 'cla', 'ClCG09G009500' => 'cla', 'ClCG11G008200' => 'cla', 'ClCG11G018080' => 'cla', 'COL.COLO4_17373' => 'col', 'COL.COLO4_22994' => 'col', 'COL.COLO4_26389' => 'col', 'COL.COLO4_27170' => 'col', 'COL.COLO4_31074' => 'col', 'COL.COLO4_31465' => 'col', 'COL.COLO4_36438' => 'col', 'COL.COLO4_36439' => 'col', 'Cpa.g.c38781' => 'cpa', 'Cpa.g.sc128.12' => 'cpa', 'Cpa.g.sc166.7' => 'cpa', 'Cpa.g.sc166.8' => 'cpa', 'Cpa.g.sc20.111' => 'cpa', 'Cpa.g.sc27.31' => 'cpa', 'Cpa.g.sc64.36' => 'cpa', 'Cpa.g.sc64.37' => 'cpa', 'Cpa.g.sc66.49' => 'cpa', 'Cpa.g.sc80.64' => 'cpa', 'CsaV3_1G012320' => 'csa', 'CsaV3_2G008480' => 'csa', 'CsaV3_2G033450' => 'csa', 'CsaV3_3G044830' => 'csa', 'CsaV3_4G033710' => 'csa', 'CsaV3_6G051730' => 'csa', 'CsaV3_7G025350' => 'csa', 'CSS0001067' => 'camsi', 'CSS0005996' => 'camsi', 'CSS0006590' => 'camsi', 'CSS0009673' => 'camsi', 'CSS0010201' => 'camsi', 'CSS0010549' => 'camsi', 'CSS0011364' => 'camsi', 'CSS0014473' => 'camsi', 'CSS0014961' => 'camsi', 'CSS0020191' => 'camsi', 'CSS0021165' => 'camsi', 'CSS0022306' => 'camsi', 'CSS0030591' => 'camsi', 'CSS0030696' => 'camsi', 'CSS0032653' => 'camsi', 'CSS0037487' => 'camsi', 'CSS0041102' => 'camsi', 'CSS0041261' => 'camsi', 'CSS0046246' => 'camsi', 'CSS0049256' => 'camsi', 'DCAR_004075' => 'dca', 'DCAR_011538' => 'dca', 'DCAR_019553' => 'dca', 'DCAR_020952' => 'dca', 'DCAR_021739' => 'dca', 'DCAR_027407' => 'dca', 'DCAR_027913' => 'dca', 'DCAR_028066' => 'dca', 'Dinv05899' => 'din', 'Dinv07563' => 'din', 'Dinv08010' => 'din', 'Dinv14125' => 'din', 'Dinv20172' => 'din', 'Dinv30743' => 'din', 'Dinv31229' => 'din', 'Dinv34162' => 'din', 'Dinv36028' => 'din', 'Dinv39368' => 'din', 'Dinv40565' => 'din', 'Dinv41706' => 'din', 'Duzib052G0089' => 'dzi', 'Duzib116G0641' => 'dzi', 'Duzib132G0069' => 'dzi', 'Duzib132G1219' => 'dzi', 'Duzib147G0278' => 'dzi', 'Duzib160G0480' => 'dzi', 'Duzib170G0661' => 'dzi', 'Duzib177G0591' => 'dzi', 'Duzib187G1353' => 'dzi', 'Duzib192G0858' => 'dzi', 'Duzib192G0883' => 'dzi', 'Duzib213G0506' => 'dzi', 'Duzib235G0289' => 'dzi', 'Duzib251G0422' => 'dzi', 'ECA232G3898' => 'eca', 'ECA233G5950' => 'eca', 'ECA234G1699' => 'eca', 'ECA234G2421' => 'eca', 'ECA236G0426' => 'eca', 'ECA236G4331' => 'eca', 'ECA248G2573' => 'eca', 'EL10Ac1g00077' => 'bvu', 'EL10Ac1g01746' => 'bvu', 'EL10Ac2g03464' => 'bvu', 'EL10Ac4g08176' => 'bvu', 'EL10Ac7g17521' => 'bvu', 'EL10Ac8g20386' => 'bvu', 'EL10Ac9g21343' => 'bvu', 'EL10Ac9g22688' => 'bvu', 'Eucgr.B03434' => 'egr', 'Eucgr.D00618' => 'egr', 'Eucgr.E02395' => 'egr', 'Eucgr.F01129' => 'egr', 'Eucgr.F02622' => 'egr', 'Eucgr.F04207' => 'egr', 'FAN01G0570' => 'fan', 'FAN03G3351' => 'fan', 'FAN06G3702' => 'fan', 'FAN07G2149' => 'fan', 'FAN10G3758' => 'fan', 'FAN11G1170' => 'fan', 'FAN11G2050' => 'fan', 'FAN11G2724' => 'fan', 'FAN12G1700' => 'fan', 'FAN12G2028' => 'fan', 'FAN15G1160' => 'fan', 'FAN15G3063' => 'fan', 'FAN16G2540' => 'fan', 'FAN16G3077' => 'fan', 'FAN16G3624' => 'fan', 'FAN17G0221' => 'fan', 'FAN20G2492' => 'fan', 'FAN20G2905' => 'fan', 'FAN21G0548' => 'fan', 'FAN21G1300' => 'fan', 'FAN22G0077' => 'fan', 'FAN22G1315' => 'fan', 'FAN24G1280' => 'fan', 'FAN24G1445' => 'fan', 'FAN24G3527' => 'fan', 'FAN25G0464' => 'fan', 'FAN25G2885' => 'fan', 'FAN25G3270' => 'fan', 'FAN27G1101' => 'fan', 'FAN27G2846' => 'fan', 'FAN27G3524' => 'fan', 'FvH4_2g11770' => 'fve', 'FvH4_2g15630' => 'fve', 'FvH4_3g05570' => 'fve', 'FvH4_3g09110' => 'fve', 'FvH4_3g19940' => 'fve', 'FvH4_4g04821' => 'fve', 'FvH4_4g31480' => 'fve', 'FvH4_7g01740' => 'fve', 'Glyma.05G130400' => 'gma', 'Glyma.05G156400' => 'gma', 'Glyma.07G197000' => 'gma', 'Glyma.08G085151' => 'gma', 'Glyma.08G114500' => 'gma', 'Glyma.08G300400' => 'gma', 'Glyma.10G215800' => 'gma', 'Glyma.12G224400' => 'gma', 'Glyma.13G179300' => 'gma', 'Glyma.13G218151' => 'gma', 'Glyma.13G238800' => 'gma', 'Glyma.13G276900' => 'gma', 'Glyma.14G078200' => 'gma', 'Glyma.15G074500' => 'gma', 'Glyma.15G094100' => 'gma', 'Glyma.17G247200' => 'gma', 'Glyma.18G120100' => 'gma', 'Glyma.20G176000' => 'gma', 'Gohir.A01G063600' => 'ghi', 'Gohir.A01G170301' => 'ghi', 'Gohir.A02G060500' => 'ghi', 'Gohir.A05G133850' => 'ghi', 'Gohir.A05G161400' => 'ghi', 'Gohir.A06G012900' => 'ghi', 'Gohir.A06G035901' => 'ghi', 'Gohir.A06G127100' => 'ghi', 'Gohir.A06G210500' => 'ghi', 'Gohir.A08G008650' => 'ghi', 'Gohir.A09G072700' => 'ghi', 'Gohir.A09G088301' => 'ghi', 'Gohir.A10G040600' => 'ghi', 'Gohir.A12G036300' => 'ghi', 'Gohir.A12G143350' => 'ghi', 'Gohir.A12G165500' => 'ghi', 'Gohir.A13G145700' => 'ghi', 'Gohir.D01G050000' => 'ghi', 'Gohir.D01G051366' => 'ghi', 'Gohir.D01G161350' => 'ghi', 'Gohir.D02G065900' => 'ghi', 'Gohir.D05G164200' => 'ghi', 'Gohir.D05G355500' => 'ghi', 'Gohir.D06G010400' => 'ghi', 'Gohir.D06G111250' => 'ghi', 'Gohir.D06G132000' => 'ghi', 'Gohir.D06G210500' => 'ghi', 'Gohir.D07G165675' => 'ghi', 'Gohir.D08G062240' => 'ghi', 'Gohir.D08G086101' => 'ghi', 'Gohir.D08G138060' => 'ghi', 'Gohir.D09G072300' => 'ghi', 'Gohir.D10G041400' => 'ghi', 'Gohir.D11G191020' => 'ghi', 'Gohir.D11G212066' => 'ghi', 'Gohir.D12G036300' => 'ghi', 'Gohir.D12G168600' => 'ghi', 'Gohir.D13G150600' => 'ghi', 'Gorai.001G057300' => 'gra', 'Gorai.002G069900' => 'gra', 'Gorai.002G200000' => 'gra', 'Gorai.003G067600' => 'gra', 'Gorai.005G074800' => 'gra', 'Gorai.006G087300' => 'gra', 'Gorai.008G037500' => 'gra', 'Gorai.008G181400' => 'gra', 'Gorai.009G169400' => 'gra', 'Gorai.009G387900' => 'gra', 'Gorai.010G013300' => 'gra', 'Gorai.010G153800' => 'gra', 'Gorai.010G255800' => 'gra', 'Gorai.011G043700' => 'gra', 'Gorai.011G198900' => 'gra', 'Gorai.013G168400' => 'gra', 'GSVIVG01005212001' => 'vvi', 'GSVIVG01006163001' => 'vvi', 'GSVIVG01009625001' => 'vvi', 'GSVIVG01014338001' => 'vvi', 'GSVIVG01020005001' => 'vvi', 'GSVIVG01021450001' => 'vvi', 'GSVIVG01023975001' => 'vvi', 'GSVIVG01034490001' => 'vvi', 'HanXRQChr04g0112071' => 'han', 'HanXRQChr05g0131151' => 'han', 'HanXRQChr09g0262371' => 'han', 'HanXRQChr09g0268401' => 'han', 'HanXRQChr10g0279241' => 'han', 'HanXRQChr10g0297961' => 'han', 'HanXRQChr11g0326231' => 'han', 'HanXRQChr11g0328471' => 'han', 'HanXRQChr16g0507941' => 'han', 'HanXRQChr17g0560211' => 'han', 'Haze_02108' => 'cav', 'Haze_02428' => 'cav', 'Haze_05593' => 'cav', 'Haze_06448' => 'cav', 'Haze_09427' => 'cav', 'Haze_12022' => 'cav', 'Haze_17612' => 'cav', 'Haze_17928' => 'cav', 'Hma1.2p1_0032F.1_g019250' => 'hma', 'Hma1.2p1_0163F.1_g072690' => 'hma', 'Hma1.2p1_0265F.1_g106710' => 'hma', 'Hma1.2p1_0286F.1_g113970' => 'hma', 'Hma1.2p1_0363F.1_g136640' => 'hma', 'Hma1.2p1_0584F.1_g183470' => 'hma', 'Hma1.2p1_0885F.1_g232570' => 'hma', 'HPP92_006022' => 'vpl', 'HPP92_007320' => 'vpl', 'HPP92_011521' => 'vpl', 'HPP92_019387' => 'vpl', 'HPP92_024038' => 'vpl', 'Hund05891' => 'sun', 'Hund06450' => 'sun', 'Hund12053' => 'sun', 'Hund16800' => 'sun', 'Hund21222' => 'sun', 'Hund22896' => 'sun', 'Hund23746' => 'sun', 'Hund27083' => 'sun', 'Lalb_Chr02g0141831' => 'lal', 'Lalb_Chr02g0141841' => 'lal', 'Lalb_Chr05g0220411' => 'lal', 'Lalb_Chr06g0162081' => 'lal', 'Lalb_Chr09g0327651' => 'lal', 'Lalb_Chr13g0295051' => 'lal', 'Lalb_Chr15g0086801' => 'lal', 'Lalb_Chr16g0383781' => 'lal', 'Lalb_Chr16g0383791' => 'lal', 'Lalb_Chr18g0055441' => 'lal', 'Lalb_Chr18g0059611' => 'lal', 'Lalb_Chr20g0109661' => 'lal', 'Lalb_Chr20g0109831' => 'lal', 'Lalb_Chr20g0121871' => 'lal', 'Lalb_Chr22g0355361' => 'lal', 'Lalb_Chr25g0286371' => 'lal', 'Lj1A1187G43' => 'lonja', 'Lj1A1205T50' => 'lonja', 'Lj1A800G33' => 'lonja', 'Lj1C1187T7' => 'lonja', 'Lj1C843T11' => 'lonja', 'Lj1g0010940' => 'lja', 'Lj2A288T69' => 'lonja', 'Lj3g0024276' => 'lja', 'Lj4A47T76' => 'lonja', 'Lj4g0005805' => 'lja', 'Lj4g0006097' => 'lja', 'Lj4g0008528' => 'lja', 'Lj4g0024907' => 'lja', 'Lj5g0012472' => 'lja', 'Lj5g0018648' => 'lja', 'Lj6C789G1' => 'lonja', 'Lj6g0004000' => 'lja', 'Lj7A292G67' => 'lonja', 'Lj7A292T64' => 'lonja', 'Lj9A400T58' => 'lonja', 'Lsat_1_v5_gn_1_126181' => 'lsa', 'Lsat_1_v5_gn_4_123041' => 'lsa', 'Lsat_1_v5_gn_4_133620' => 'lsa', 'Lsat_1_v5_gn_4_53221' => 'lsa', 'Lsat_1_v5_gn_4_71961' => 'lsa', 'Lsat_1_v5_gn_7_105241' => 'lsa', 'Lsat_1_v5_gn_7_21361' => 'lsa', 'Lsat_1_v5_gn_7_28860' => 'lsa', 'Lsat_1_v5_gn_7_31260' => 'lsa', 'Lsat_1_v5_gn_8_52801' => 'lsa', 'Manes.02G191400' => 'mes', 'Manes.03G110100' => 'mes', 'Manes.04G071100' => 'mes', 'Manes.05G100500' => 'mes', 'Manes.05G164700' => 'mes', 'Manes.15G087000' => 'mes', 'Manes.15G121500' => 'mes', 'Manes.16G028300' => 'mes', 'Manes.17G046100' => 'mes', 'Manes.17G069800' => 'mes', 'Manes.18G100500' => 'mes', 'Mapoly0002s0109' => 'mpo', 'Mapoly0024s0007' => 'mpo', 'Mapoly0089s0032' => 'mpo', 'MBI04_g42241_MAGBIO' => 'mbi', 'MBI05_g11988_MAGBIO' => 'mbi', 'MBI05_g35452_MAGBIO' => 'mbi', 'MBI07_g30179_MAGBIO' => 'mbi', 'MBI07_g35859_MAGBIO' => 'mbi', 'MBI07_g35860_MAGBIO' => 'mbi', 'MBI07_g37166_MAGBIO' => 'mbi', 'MBI08_g18172_MAGBIO' => 'mbi', 'MBI09_g08441_MAGBIO' => 'mbi', 'MBI13_g01676_MAGBIO' => 'mbi', 'MBI14_g42955_MAGBIO' => 'mbi', 'MBI16_g13161_MAGBIO' => 'mbi', 'MBI17_g27204_MAGBIO' => 'mbi', 'MBI19_g21595_MAGBIO' => 'mbi', 'MD00G1148400' => 'mdo', 'MD02G1301200' => 'mdo', 'MD03G1227800' => 'mdo', 'MD05G1041100' => 'mdo', 'MD05G1124800' => 'mdo', 'MD05G1284000' => 'mdo', 'MD05G1338800' => 'mdo', 'MD05G1338900' => 'mdo', 'MD07G1022800' => 'mdo', 'MD10G1047500' => 'mdo', 'MD10G1127500' => 'mdo', 'MD10G1262300' => 'mdo', 'MD10G1293800' => 'mdo', 'MD16G1074300' => 'mdo', 'Medtr1g021670' => 'mtr', 'Medtr1g096320' => 'mtr', 'Medtr2g013690' => 'mtr', 'Medtr2g019450' => 'mtr', 'Medtr2g085170' => 'mtr', 'Medtr4g088785' => 'mtr', 'Medtr8g055930' => 'mtr', 'Medtr8g085850' => 'mtr', 'MELO3C002605.2' => 'cme', 'MELO3C003891.2' => 'cme', 'MELO3C004012.2' => 'cme', 'MELO3C007134.2' => 'cme', 'MELO3C008118.2' => 'cme', 'MELO3C016700.2' => 'cme', 'MELO3C024127.2' => 'cme', 'MELO3C033361.2' => 'cme', 'MELO3C033362.2' => 'cme', 'Migut.C00430' => 'egut', 'Migut.C01246' => 'egut', 'Migut.E00101' => 'egut', 'Migut.H01486' => 'egut', 'Migut.H01939' => 'egut', 'Migut.K00360' => 'egut', 'Migut.M00910' => 'egut', 'Migut.M01139' => 'egut', 'Migut.N02677' => 'egut', 'MSTRG.13252' => 'ama', 'MSTRG.14701' => 'ama', 'MSTRG.1521' => 'ama', 'MSTRG.15884' => 'ama', 'MSTRG.16242' => 'ama', 'MSTRG.22285' => 'ama', 'MSTRG.22444' => 'ama', 'MSTRG.2349' => 'ama', 'MSTRG.26308' => 'ama', 'MSTRG.28296' => 'ama', 'MSTRG.9895' => 'ama', 'Nitab4.5_0000110g0060' => 'nta', 'Nitab4.5_0000420g0130' => 'nta', 'Nitab4.5_0000422g0030' => 'nta', 'Nitab4.5_0000560g0180' => 'nta', 'Nitab4.5_0000703g0100' => 'nta', 'Nitab4.5_0000786g0200' => 'nta', 'Nitab4.5_0001336g0020' => 'nta', 'Nitab4.5_0001796g0030' => 'nta', 'Nitab4.5_0003348g0060' => 'nta', 'Nitab4.5_0003698g0040' => 'nta', 'Nitab4.5_0003942g0090' => 'nta', 'Nitab4.5_0004775g0070' => 'nta', 'Nitab4.5_0004864g0030' => 'nta', 'Nitab4.5_0005615g0020' => 'nta', 'Nitab4.5_0009288g0030' => 'nta', 'Nitab4.5_0009341g0010' => 'nta', 'Nitab4.5_0009535g0010' => 'nta', 'Nn1g03995' => 'nnu', 'Nn1g04100' => 'nnu', 'Nn1g06530' => 'nnu', 'Nn3g16404' => 'nnu', 'Nn3g17212' => 'nnu', 'Nn3g20776' => 'nnu', 'Nn3g21923' => 'nnu', 'Nn5g27737' => 'nnu', 'Nn5g29461' => 'nnu', 'Nn7g38355' => 'nnu', 'Nn8g39873' => 'nnu', 'Oeu000548.2' => 'oeu', 'Oeu004672.1' => 'oeu', 'Oeu015605.2' => 'oeu', 'Oeu016092.1' => 'oeu', 'Oeu017879.3' => 'oeu', 'Oeu024910.1' => 'oeu', 'Oeu028965.1' => 'oeu', 'Oeu031269.1' => 'oeu', 'Oeu031270.1' => 'oeu', 'Oeu032535.1' => 'oeu', 'Oeu034151.1' => 'oeu', 'Oeu034152.1' => 'oeu', 'Oeu034588.2' => 'oeu', 'Oeu050846.1' => 'oeu', 'Oeu050849.2' => 'oeu', 'Oeu051063.2' => 'oeu', 'Oeu052368.1' => 'oeu', 'Oeu052370.1' => 'oeu', 'Os01g0210400' => 'osa', 'Os01g0304300' => 'osa', 'Os01g0749100' => 'osa', 'Os02g0745800' => 'osa', 'Os03g0769050' => 'osa', 'Os05g0531500' => 'osa', 'Os06g0724300' => 'osa', 'Os11g0198100' => 'osa', 'Peaxi162Scf00069g01425' => 'pax', 'Peaxi162Scf00280g00811' => 'pax', 'Peaxi162Scf00310g00615' => 'pax', 'Peaxi162Scf00362g00542' => 'pax', 'Peaxi162Scf00461g00310' => 'pax', 'Peaxi162Scf00530g00118' => 'pax', 'Peaxi162Scf00541g00057' => 'pax', 'Peaxi162Scf00661g00017' => 'pax', 'Peaxi162Scf00926g00027' => 'pax', 'Peaxi162Scf01064g00263' => 'pax', 'Peaxi162Scf01211g00135' => 'pax', 'PGR004G2336' => 'pgr', 'PGR042G0327' => 'pgr', 'PGR042G1957' => 'pgr', 'PGR042G2003' => 'pgr', 'PGR042G3929' => 'pgr', 'PGR083G1137' => 'pgr', 'PGR083G1364' => 'pgr', 'PGSC0003DMG400003381' => 'stu', 'PGSC0003DMG400003417' => 'stu', 'PGSC0003DMG400008981' => 'stu', 'PGSC0003DMG400012417' => 'stu', 'PGSC0003DMG400012823' => 'stu', 'PGSC0003DMG400016885' => 'stu', 'PGSC0003DMG400022812' => 'stu', 'PGSC0003DMG400029726' => 'stu', 'PGSC0003DMG401009243' => 'stu', 'PGSC0003DMG401031505' => 'stu', 'PGSC0003DMG402031505' => 'stu', 'Phvul.001G017600' => 'pvu', 'Phvul.002G193500' => 'pvu', 'Phvul.002G228900' => 'pvu', 'Phvul.002G236800' => 'pvu', 'Phvul.003G049500' => 'pvu', 'Phvul.005G072000' => 'pvu', 'Phvul.006G164800' => 'pvu', 'Phvul.006G185100' => 'pvu', 'Phvul.007G090000' => 'pvu', 'Potri.001G399800' => 'ptr', 'Potri.002G149900' => 'ptr', 'Potri.004G044100' => 'ptr', 'Potri.004G177600' => 'ptr', 'Potri.009G138000' => 'ptr', 'Potri.010G094000' => 'ptr', 'Potri.011G053000' => 'ptr', 'Potri.011G119300' => 'ptr', 'Potri.013G113700' => 'ptr', 'Potri.018G107800' => 'ptr', 'Potri.019G084100' => 'ptr', 'Pp3c14_23720' => 'ppa', 'Pp3c16_6340' => 'ppa', 'Pp3c23_13420' => 'ppa', 'Pp3c24_2740' => 'ppa', 'Pp3c25_860' => 'ppa', 'Pp3c8_21750' => 'ppa', 'Prupe.1G273000' => 'ppe', 'Prupe.1G273700' => 'ppe', 'Prupe.1G274100' => 'ppe', 'Prupe.2G023300' => 'ppe', 'Prupe.4G048000' => 'ppe', 'Prupe.4G080400' => 'ppe', 'Prupe.4G181200' => 'ppe', 'Prupe.8G056900' => 'ppe', 'Prupe.8G168700' => 'ppe', 'Psat1g189080' => 'psa', 'Psat1g204760' => 'psa', 'Psat4g175560' => 'psa', 'Psat4g177720' => 'psa', 'Psat5g244240' => 'psa', 'Psat6g010720' => 'psa', 'Psat6g187200' => 'psa', 'Psat7g072040' => 'psa', 'PSO017G3501' => 'pso', 'PSO063G2148' => 'pso', 'PSO063G5608' => 'pso', 'PSO210G6392' => 'pso', 'PSO541G2319' => 'pso', 'PSO541G2836' => 'pso', 'PSO541G4012' => 'pso', 'PSO541G6253' => 'pso', 'PSO675G0580' => 'pso', 'PSO675G0856' => 'pso', 'PSO675G5635' => 'pso', 'PSO675G9157' => 'pso', 'PSO832G1660' => 'pso', 'PSO832G1969' => 'pso', 'QL02p007186' => 'qlo', 'QL02p033904' => 'qlo', 'QL03p064391' => 'qlo', 'QL05p040593' => 'qlo', 'QL05p058242' => 'qlo', 'QL08p021825' => 'qlo', 'QL11p004981' => 'qlo', 'RcHm_v2.0_Chr1g0318301' => 'rch', 'RcHm_v2.0_Chr4g0418501' => 'rch', 'RcHm_v2.0_Chr4g0439971' => 'rch', 'RcHm_v2.0_Chr5g0008541' => 'rch', 'RcHm_v2.0_Chr5g0014101' => 'rch', 'RcHm_v2.0_Chr5g0014131' => 'rch', 'RcHm_v2.0_Chr5g0033621' => 'rch', 'RcHm_v2.0_Chr6g0272041' => 'rch', 'RcHm_v2.0_Chr6g0278831' => 'rch', 'Rhsim02G0130400' => 'rsi', 'Rhsim02G0171100' => 'rsi', 'Rhsim05G0053000' => 'rsi', 'Rhsim05G0053100' => 'rsi', 'Rhsim06G0096500' => 'rsi', 'Rhsim06G0096600' => 'rsi', 'Rhsim06G0199100' => 'rsi', 'Rhsim12G0062300' => 'rsi', 'Rhsim12G0062800' => 'rsi', 'Sabra02G0118600' => 'sbr', 'Sabra04G0027300' => 'sbr', 'Sabra04G0119500' => 'sbr', 'Sabra08G0112500' => 'sbr', 'Sabra11G0036800' => 'sbr', 'Sabra11G0103800' => 'sbr', 'Sabra13G0096300' => 'sbr', 'Sabra16G0262300' => 'sbr', 'Sabra18G0091700' => 'sbr', 'Sabra19G0095400' => 'sbr', 'SalBow6G3080' => 'sbo', 'SalBow7G1157' => 'sbo', 'SalBow7G2123' => 'sbo', 'SalBow7G2285' => 'sbo', 'SalBow7G3537' => 'sbo', 'SalBow8G2947' => 'sbo', 'SalBow8G4463' => 'sbo', 'SalBow8G5466' => 'sbo', 'Sc01g0001750' => 'sci', 'Sc02g0006640' => 'sci', 'Sc02g0006670' => 'sci', 'Sc04g0008220' => 'sci', 'Sc05g0006190' => 'sci', 'Sc08g0002760' => 'sci', 'Sc17g0006170' => 'sci', 'Sc22g0002050' => 'sci', 'Sc23g0001190' => 'sci', 'Sc24g0000980' => 'sci', 'Sed0006245' => 'sed', 'Sed0007543' => 'sed', 'Sed0009411' => 'sed', 'Sed0010765' => 'sed', 'Sed0012944' => 'sed', 'Sed0014682' => 'sed', 'Sed0016174' => 'sed', 'Sed0016796' => 'sed', 'Sed0020317' => 'sed', 'Sed0021467' => 'sed', 'SEGI_01316' => 'sgi', 'SEGI_03374' => 'sgi', 'SEGI_16265' => 'sgi', 'SEGI_18569' => 'sgi', 'SEGI_20351' => 'sgi', 'SEGI_26395' => 'sgi', 'SEGI_29469' => 'sgi', 'SEGI_34771' => 'sgi', 'SEGI_36769' => 'sgi', 'SEGI_37139' => 'sgi', 'SGA_v2.0_scaffold100G29687' => 'sas', 'SGA_v2.0_scaffold118G32472' => 'sas', 'SGA_v2.0_scaffold14G07051' => 'sas', 'SGA_v2.0_scaffold183G39845' => 'sas', 'SGA_v2.0_scaffold1G00174' => 'sas', 'SGA_v2.0_scaffold22G09714' => 'sas', 'SGA_v2.0_scaffold333G48992' => 'sas', 'SGA_v2.0_scaffold46G17491' => 'sas', 'SGA_v2.0_scaffold49G18294' => 'sas', 'SGA_v2.0_scaffold63G21658' => 'sas', 'SHI01741' => 'shi', 'SHI05771' => 'shi', 'SHI18077' => 'shi', 'SHI20525' => 'shi', 'SHI20527' => 'shi', 'SHI20528' => 'shi', 'SMO172G0185' => 'smo', 'SMO198G0020' => 'smo', 'SMO351G0006' => 'smo', 'SMO356G0118' => 'smo', 'SMO358G0296' => 'smo', 'SMO367G0079' => 'smo', 'SMO367G1277' => 'smo', 'Solyc01g014220.3' => 'sly', 'Solyc01g111770.2' => 'sly', 'Solyc02g078180.3' => 'sly', 'Solyc03g006430.3' => 'sly', 'Solyc03g006456.1' => 'sly', 'Solyc03g079860.2' => 'sly', 'Solyc04g079770.3' => 'sly', 'Solyc05g007430.4' => 'sly', 'Solyc07g063150.3' => 'sly', 'Solyc08g016620.3' => 'sly', 'Solyc09g057590.3' => 'sly', 'Solyc09g057600.1' => 'sly', 'Solyc10g009050.3' => 'sly', 'Solyc11g017420.2' => 'sly', 'Sopen01g053810' => 'spe', 'Sopen02g023040' => 'spe', 'Sopen03g002440' => 'spe', 'Sopen04g033350' => 'spe', 'Sopen05g003310' => 'spe', 'Sopen07g004050' => 'spe', 'Sopen07g031340' => 'spe', 'Sopen08g006990' => 'spe', 'Sopen10g004830' => 'spe', 'Sopen11g009370' => 'spe', 'Sp1g24450' => 'spa', 'Sp1g29670' => 'spa', 'Sp1g39600' => 'spa', 'Sp2g11080' => 'spa', 'Sp2g13970' => 'spa', 'Sp4g16130' => 'spa', 'Sp6g13080' => 'spa', 'Sp7g37270' => 'spa', 'TAR371G0065' => 'tar', 'TAR376G0340' => 'tar', 'TAR376G0435' => 'tar', 'TAR381G0002' => 'tar', 'TAR381G1236' => 'tar', 'TAR624G0055' => 'tar', 'TAR624G0324' => 'tar', 'TAR624G0696' => 'tar', 'TAR624G0906' => 'tar', 'TAR625G0107' => 'tar', 'TAR626G0015' => 'tar', 'TAR626G1356' => 'tar', 'TAR627G0888' => 'tar', 'TAR628G0399' => 'tar', 'TAR628G1327' => 'tar', 'TAR629G2831' => 'tar', 'TAR629G2874' => 'tar', 'TAR633G1432' => 'tar', 'TAR633G2771' => 'tar', 'THA.LOC104803394' => 'tha', 'THA.LOC104805153' => 'tha', 'THA.LOC104806784' => 'tha', 'THA.LOC104810473' => 'tha', 'THA.LOC104813100' => 'tha', 'THA.LOC104814215' => 'tha', 'THA.LOC104815554' => 'tha', 'THA.LOC104820544' => 'tha', 'THA.LOC104824754' => 'tha', 'THA.LOC104827717' => 'tha', 'Thecc.02G031400' => 'tca', 'Thecc.02G055900' => 'tca', 'Thecc.02G350800' => 'tca', 'Thecc.06G150900' => 'tca', 'Thecc.06G186600' => 'tca', 'Thecc.07G089600' => 'tca', 'Thecc.08G020400' => 'tca', 'Thecc.08G182100' => 'tca', 'Thhalv10000873m.g' => 'esa', 'Thhalv10004185m.g' => 'esa', 'Thhalv10006981m.g' => 'esa', 'Thhalv10007204m.g' => 'esa', 'Thhalv10011374m.g' => 'esa', 'Thhalv10013482m.g' => 'esa', 'Thhalv10017801m.g' => 'esa', 'Thhalv10024983m.g' => 'esa', 'TPR.G12072' => 'tpr', 'TPR.G15769' => 'tpr', 'TPR.G16504' => 'tpr', 'TPR.G16506' => 'tpr', 'TPR.G24345' => 'tpr', 'TPR.G26666' => 'tpr', 'TPR.G27320' => 'tpr', 'TPR.G31819' => 'tpr', 'TPR.G38879' => 'tpr', 'TPR.G39015' => 'tpr', 'TPR.G8819' => 'tpr', 'TWI09G0924' => 'twi', 'TWI12G0811' => 'twi', 'TWI12G1294' => 'twi', 'TWI31G0150' => 'twi', 'TWI36G1262' => 'twi', 'TWI38G1287' => 'twi', 'TWI38G1633' => 'twi', 'TWI38G1982' => 'twi', 'TWI39G0116' => 'twi', 'TWI60G1011' => 'twi', 'TWI63G0171' => 'twi', 'TWI73G0839' => 'twi', 'TWI79G1511' => 'twi', 'unitig_0.g915' => 'ugi', 'unitig_0.g916' => 'ugi', 'unitig_21.g20219' => 'ugi', 'unitig_21.g20416' => 'ugi', 'unitig_578.g16132' => 'ugi', 'unitig_578.g16718' => 'ugi', 'unitig_62.g23481' => 'ugi', 'unitig_744.g24535' => 'ugi', 'unitig_749.g13525' => 'ugi', 'vmacro01248' => 'vma', 'vmacro02290' => 'vma', 'vmacro10946' => 'vma', 'vmacro11865' => 'vma', 'vmacro12493' => 'vma', 'vmacro17322' => 'vma', 'vmacro21599' => 'vma', 'vmacro23041' => 'vma', 'VMungo0251G0004' => 'vmu', 'VMungo0251G2639' => 'vmu', 'VMungo0251G2967' => 'vmu', 'VMungo0540G0864' => 'vmu', 'VMungo0540G1569' => 'vmu', 'VMungo0647G0317' => 'vmu', 'VMungo0720G1373' => 'vmu', 'VMungo0720G1508' => 'vmu', 'VMungo1080G0485' => 'vmu', 'VMungo1215G3177' => 'vmu', 'Zm00001eb112600' => 'zma', 'Zm00001eb120220' => 'zma', 'Zm00001eb153240' => 'zma', 'Zm00001eb168880' => 'zma', 'Zm00001eb213920' => 'zma', 'Zm00001eb228280' => 'zma', 'Zm00001eb254580' => 'zma', 'Zm00001eb272180' => 'zma', 'Zm00001eb293190' => 'zma', 'Zm00001eb322930' => 'zma', 'Zm00001eb353360' => 'zma', 'Zm00001eb353390' => 'zma', 'Zm00001eb353430' => 'zma', 'Zm00001eb353440' => 'zma', 'Zm00001eb353780' => 'zma' ), 'gf_id' => 'HOM05D000499', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000499' ), 'data_identifier' => 'HOM05D000499', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000499', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1066', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p29780' => 'bna', 'A02p33180' => 'bna', 'A03p16470' => 'bna', 'A03p66010' => 'bna', 'A04p25970' => 'bna', 'A06p01270' => 'bna', 'A06p46080' => 'bna', 'A07p11400' => 'bna', 'A08p01840' => 'bna', 'A08p08230' => 'bna', 'A08p25740' => 'bna', 'A09p32070' => 'bna', 'A09p37830' => 'bna', 'A09p42840' => 'bna', 'A09p42850' => 'bna', 'Aa31LG10G2060' => 'aar', 'Aa31LG2G7410' => 'aar', 'Aa31LG6G10200' => 'aar', 'Aa31LG6G16680' => 'aar', 'Aa31LG6G8470' => 'aar', 'Aa31LG9G12730' => 'aar', 'Aa31LG9G13680' => 'aar', 'Aa31LG9G14920' => 'aar', 'Aa31LG9G6650' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4977' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5467' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3254' => 'aag', 'Actinidia02578' => 'ach', 'Actinidia07693' => 'ach', 'Actinidia08413' => 'ach', 'Actinidia08414' => 'ach', 'Actinidia15289' => 'ach', 'Actinidia19871' => 'ach', 'Actinidia21475' => 'ach', 'Actinidia22576' => 'ach', 'Actinidia28327' => 'ach', 'Actinidia32491' => 'ach', 'Actinidia39463' => 'ach', 'Actinidia39571' => 'ach', 'Ah.01g013750' => 'amhyb', 'Ah.01g023210' => 'amhyb', 'Ah.04g164850' => 'amhyb', 'Ah.05g178060' => 'amhyb', 'Ah.07g204270' => 'amhyb', 'Ah.07g208480' => 'amhyb', 'Ah.09g237410' => 'amhyb', 'Ah.14g089460' => 'amhyb', 'AL1G41790' => 'aly', 'AL1G49050' => 'aly', 'AL1G53810' => 'aly', 'AL1G61400' => 'aly', 'AL4G18580' => 'aly', 'AL5G12510' => 'aly', 'AL5G12540' => 'aly', 'AL6G43230' => 'aly', 'AL7G10370' => 'aly', 'AL7G19250' => 'aly', 'AL8G12240' => 'aly', 'AL8G18540' => 'aly', 'Aqoxy1G02409' => 'aox', 'Aqoxy2G03993' => 'aox', 'Aqoxy3G03357' => 'aox', 'Aqoxy4G00785' => 'aox', 'Aqoxy5G02598' => 'aox', 'Aqoxy6G00132' => 'aox', 'Aqoxy7G01776' => 'aox', 'Aqoxy7G02316' => 'aox', 'Aqoxy7G03973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.12AFKW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B8730' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27IQR1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3F75VG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3RE0GA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41TCQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.527VTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FIR39' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5W8UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DA38EV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ63HS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H1I32C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HC27T5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4M8AP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7N3CZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9UVDZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LS1NQA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT1D4B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SKC4TM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCFV76' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF9Q1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQWD9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1ZM88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WE07RT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YCK7VH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJE6Q6' => 'arhy', 'AT1G28240' => 'ath', 'AT1G34550' => 'ath', 'AT1G53040' => 'ath', 'AT2G02910' => 'ath', 'AT4G09630' => 'ath', 'AT4G38500' => 'ath', 'AT5G42660' => 'ath', 'AT5G46220' => 'ath', 'ATR0152G026' => 'atr', 'ATR0564G343' => 'atr', 'ATR0706G151' => 'atr', 'ATR0733G207' => 'atr', 'ATR0751G234' => 'atr', 'ATR0807G048' => 'atr', 'ATR1091G084' => 'atr', 'Atru.chr10.1229' => 'acertr', 'Atru.chr10.1230' => 'acertr', 'Atru.chr10.1874' => 'acertr', 'Atru.chr11.1808' => 'acertr', 'Atru.chr13.1795' => 'acertr', 'Atru.chr13.570' => 'acertr', 'Atru.chr2.2608' => 'acertr', 'Atru.chr2.2609' => 'acertr', 'Atru.chr5.3428' => 'acertr', 'Atru.chr8.1171' => 'acertr', 'AUR62004651' => 'cqu', 'AUR62008675' => 'cqu', 'AUR62010014' => 'cqu', 'AUR62013004' => 'cqu', 'AUR62014825' => 'cqu', 'AUR62015015' => 'cqu', 'AUR62015151' => 'cqu', 'AUR62017020' => 'cqu', 'AUR62019422' => 'cqu', 'AUR62023570' => 'cqu', 'AUR62025571' => 'cqu', 'AUR62029098' => 'cqu', 'AUR62033863' => 'cqu', 'AUR62034296' => 'cqu', 'AUR62040075' => 'cqu', 'BcaB02g07334' => 'bca', 'BcaB02g10575' => 'bca', 'BcaB03g12119' => 'bca', 'BcaB03g12120' => 'bca', 'BcaB03g13945' => 'bca', 'BcaB04g17123' => 'bca', 'BcaB04g17867' => 'bca', 'BcaB04g19839' => 'bca', 'BcaB07g30317' => 'bca', 'BcaB07g32432' => 'bca', 'BcaB07g33362' => 'bca', 'BcaB08g36611' => 'bca', 'BcaC01g00028' => 'bca', 'BcaC01g01356' => 'bca', 'BcaC01g02034' => 'bca', 'BcaC01g06051' => 'bca', 'BcaC03g16839' => 'bca', 'BcaC03g17176' => 'bca', 'BcaC05g26829' => 'bca', 'BcaC06g31490' => 'bca', 'BcaC06g35344' => 'bca', 'BcaC06g36570' => 'bca', 'BcaC07g37537' => 'bca', 'BcaC08g43491' => 'bca', 'BcaC08g43773' => 'bca', 'BcaNung00234' => 'bca', 'BcaNung01982' => 'bca', 'BcaNung03707' => 'bca', 'BcaNung06454' => 'bca', 'BolC2t10762H' => 'bol', 'BolC2t11191H' => 'bol', 'BolC3t14322H' => 'bol', 'BolC3t19747H' => 'bol', 'BolC3t21425H' => 'bol', 'BolC4t27800H' => 'bol', 'BolC5t31423H' => 'bol', 'BolC6t35951H' => 'bol', 'BolC6t36282H' => 'bol', 'BolC7t40678H' => 'bol', 'BolC7t40679H' => 'bol', 'BolC7t42222H' => 'bol', 'BolC7t43492H' => 'bol', 'BolC7t46785H' => 'bol', 'BolC8t47853H' => 'bol', 'BolC9t56805H' => 'bol', 'BraA02t08000Z' => 'bra', 'BraA02t08341Z' => 'bra', 'BraA03t10936Z' => 'bra', 'BraA03t15657Z' => 'bra', 'BraA04t18100Z' => 'bra', 'BraA05t20523Z' => 'bra', 'BraA06t23353Z' => 'bra', 'BraA06t27473Z' => 'bra', 'BraA06t27769Z' => 'bra', 'BraA07t28928Z' => 'bra', 'BraA08t32236Z' => 'bra', 'BraA08t32841Z' => 'bra', 'BraA08t34524Z' => 'bra', 'BraA09t38742Z' => 'bra', 'BraA09t39295Z' => 'bra', 'C02p47180' => 'bna', 'C02p50990' => 'bna', 'C03p19360' => 'bna', 'C03p74950' => 'bna', 'C03p91000' => 'bna', 'C04p63260' => 'bna', 'C05p27050' => 'bna', 'C06p08750' => 'bna', 'C06p11490' => 'bna', 'C07p02820' => 'bna', 'C07p17180' => 'bna', 'C07p29440' => 'bna', 'C07p63730' => 'bna', 'C09p39260' => 'bna', 'CAN.G1164.34' => 'can', 'CAN.G1164.39' => 'can', 'CAN.G1530.3' => 'can', 'CAN.G162.61' => 'can', 'CAN.G176.6' => 'can', 'CAN.G289.49' => 'can', 'CAN.G370.21' => 'can', 'CAN.G370.22' => 'can', 'CAN.G371.117' => 'can', 'CAN.G58.37' => 'can', 'CAN.G588.98' => 'can', 'CANSAT21G2266' => 'cansat', 'CANSAT25G2799' => 'cansat', 'CANSAT35G0862' => 'cansat', 'CANSAT35G1704' => 'cansat', 'CANSAT35G1760' => 'cansat', 'CANSAT56G3971' => 'cansat', 'CANSAT56G4116' => 'cansat', 'CANSAT80G1259' => 'cansat', 'CARHR027730' => 'chi', 'CARHR033880' => 'chi', 'CARHR043270' => 'chi', 'CARHR145330' => 'chi', 'CARHR145340' => 'chi', 'CARHR175570' => 'chi', 'CARHR181570' => 'chi', 'CARHR258470' => 'chi', 'CARHR260490' => 'chi', 'CARHR294220' => 'chi', 'Carub.0001s2668' => 'cru', 'Carub.0001s3257' => 'cru', 'Carub.0001s4220' => 'cru', 'Carub.0005s0179' => 'cru', 'Carub.0006s2807' => 'cru', 'Carub.0007s0039' => 'cru', 'Carub.0008s0169' => 'cru', 'Carub.0008s0636' => 'cru', 'Ca_00338_v3' => 'car', 'Ca_00542_v3' => 'car', 'Ca_01844_v3' => 'car', 'Ca_10611_v3' => 'car', 'Ca_13326_v3' => 'car', 'Ca_17944_v3' => 'car', 'Ca_18546_v3' => 'car', 'Ca_24219_v3' => 'car', 'Ca_29972_v3' => 'car', 'CBR_g3681' => 'cbr', 'CBR_g40021' => 'cbr', 'Cc01_g08140' => 'ccan', 'Cc02_g13410' => 'ccan', 'Cc02_g37480' => 'ccan', 'Cc05_g12030' => 'ccan', 'Cc09_g03370' => 'ccan', 'Cc09_g10300' => 'ccan', 'Cc10_g03530' => 'ccan', 'Cc10_g11380' => 'ccan', 'CDE01G0176' => 'cde', 'CDE02G0675' => 'cde', 'CDE02G0942' => 'cde', 'CDE02G1153' => 'cde', 'CDE02G4177' => 'cde', 'CDE04G2117' => 'cde', 'CDE04G2736' => 'cde', 'CDE08G1161' => 'cde', 'CDE09G1238' => 'cde', 'Cfa000467' => 'cfa', 'Cfa000947' => 'cfa', 'Cfa004969' => 'cfa', 'Cfa005284' => 'cfa', 'Cfa008993' => 'cfa', 'Cfa018187' => 'cfa', 'Cfa018454' => 'cfa', 'Cfa020585' => 'cfa', 'Ciclev10000424m.g' => 'ccl', 'Ciclev10003605m.g' => 'ccl', 'Ciclev10007828m.g' => 'ccl', 'Ciclev10014620m.g' => 'ccl', 'Ciclev10015169m.g' => 'ccl', 'Ciclev10018291m.g' => 'ccl', 'Ciclev10028256m.g' => 'ccl', 'Ciclev10033822m.g' => 'ccl', 'CiPaw.05G060300' => 'cil', 'CiPaw.05G085000' => 'cil', 'CiPaw.06G083700' => 'cil', 'CiPaw.06G120300' => 'cil', 'CiPaw.09G060500' => 'cil', 'CiPaw.09G123800' => 'cil', 'CiPaw.11G169700' => 'cil', 'CiPaw.12G118300' => 'cil', 'CiPaw.15G071000' => 'cil', 'CiPaw.15G081900' => 'cil', 'ClCG01G024610' => 'cla', 'ClCG03G006070' => 'cla', 'ClCG05G019250' => 'cla', 'ClCG09G009500' => 'cla', 'ClCG11G008200' => 'cla', 'ClCG11G018080' => 'cla', 'COL.COLO4_17373' => 'col', 'COL.COLO4_22994' => 'col', 'COL.COLO4_26389' => 'col', 'COL.COLO4_27170' => 'col', 'COL.COLO4_31074' => 'col', 'COL.COLO4_31465' => 'col', 'COL.COLO4_36438' => 'col', 'COL.COLO4_36439' => 'col', 'Cpa.g.c38781' => 'cpa', 'Cpa.g.sc128.12' => 'cpa', 'Cpa.g.sc166.7' => 'cpa', 'Cpa.g.sc166.8' => 'cpa', 'Cpa.g.sc20.111' => 'cpa', 'Cpa.g.sc27.31' => 'cpa', 'Cpa.g.sc64.36' => 'cpa', 'Cpa.g.sc64.37' => 'cpa', 'Cpa.g.sc66.49' => 'cpa', 'Cpa.g.sc80.64' => 'cpa', 'CsaV3_1G012320' => 'csa', 'CsaV3_2G008480' => 'csa', 'CsaV3_2G033450' => 'csa', 'CsaV3_3G044830' => 'csa', 'CsaV3_4G033710' => 'csa', 'CsaV3_6G051730' => 'csa', 'CsaV3_7G025350' => 'csa', 'CSS0001067' => 'camsi', 'CSS0005996' => 'camsi', 'CSS0006590' => 'camsi', 'CSS0009673' => 'camsi', 'CSS0010201' => 'camsi', 'CSS0010549' => 'camsi', 'CSS0011364' => 'camsi', 'CSS0014473' => 'camsi', 'CSS0014961' => 'camsi', 'CSS0020191' => 'camsi', 'CSS0021165' => 'camsi', 'CSS0022306' => 'camsi', 'CSS0030591' => 'camsi', 'CSS0030696' => 'camsi', 'CSS0032653' => 'camsi', 'CSS0037487' => 'camsi', 'CSS0041102' => 'camsi', 'CSS0041261' => 'camsi', 'CSS0046246' => 'camsi', 'CSS0049256' => 'camsi', 'DCAR_004075' => 'dca', 'DCAR_011538' => 'dca', 'DCAR_019553' => 'dca', 'DCAR_020952' => 'dca', 'DCAR_021739' => 'dca', 'DCAR_027407' => 'dca', 'DCAR_027913' => 'dca', 'DCAR_028066' => 'dca', 'Dinv05899' => 'din', 'Dinv07563' => 'din', 'Dinv08010' => 'din', 'Dinv14125' => 'din', 'Dinv20172' => 'din', 'Dinv30743' => 'din', 'Dinv31229' => 'din', 'Dinv34162' => 'din', 'Dinv36028' => 'din', 'Dinv39368' => 'din', 'Dinv40565' => 'din', 'Dinv41706' => 'din', 'Duzib052G0089' => 'dzi', 'Duzib116G0641' => 'dzi', 'Duzib132G0069' => 'dzi', 'Duzib132G1219' => 'dzi', 'Duzib147G0278' => 'dzi', 'Duzib160G0480' => 'dzi', 'Duzib170G0661' => 'dzi', 'Duzib177G0591' => 'dzi', 'Duzib187G1353' => 'dzi', 'Duzib192G0858' => 'dzi', 'Duzib192G0883' => 'dzi', 'Duzib213G0506' => 'dzi', 'Duzib235G0289' => 'dzi', 'Duzib251G0422' => 'dzi', 'ECA232G3898' => 'eca', 'ECA233G5950' => 'eca', 'ECA234G1699' => 'eca', 'ECA234G2421' => 'eca', 'ECA236G0426' => 'eca', 'ECA236G4331' => 'eca', 'ECA248G2573' => 'eca', 'EL10Ac1g00077' => 'bvu', 'EL10Ac1g01746' => 'bvu', 'EL10Ac2g03464' => 'bvu', 'EL10Ac4g08176' => 'bvu', 'EL10Ac7g17521' => 'bvu', 'EL10Ac8g20386' => 'bvu', 'EL10Ac9g21343' => 'bvu', 'EL10Ac9g22688' => 'bvu', 'Eucgr.B03434' => 'egr', 'Eucgr.D00618' => 'egr', 'Eucgr.E02395' => 'egr', 'Eucgr.F01129' => 'egr', 'Eucgr.F02622' => 'egr', 'Eucgr.F04207' => 'egr', 'FAN01G0570' => 'fan', 'FAN03G3351' => 'fan', 'FAN06G3702' => 'fan', 'FAN07G2149' => 'fan', 'FAN10G3758' => 'fan', 'FAN11G1170' => 'fan', 'FAN11G2050' => 'fan', 'FAN11G2724' => 'fan', 'FAN12G1700' => 'fan', 'FAN12G2028' => 'fan', 'FAN15G1160' => 'fan', 'FAN15G3063' => 'fan', 'FAN16G2540' => 'fan', 'FAN16G3077' => 'fan', 'FAN16G3624' => 'fan', 'FAN17G0221' => 'fan', 'FAN20G2492' => 'fan', 'FAN20G2905' => 'fan', 'FAN21G0548' => 'fan', 'FAN21G1300' => 'fan', 'FAN22G0077' => 'fan', 'FAN22G1315' => 'fan', 'FAN24G1280' => 'fan', 'FAN24G1445' => 'fan', 'FAN24G3527' => 'fan', 'FAN25G0464' => 'fan', 'FAN25G2885' => 'fan', 'FAN25G3270' => 'fan', 'FAN27G1101' => 'fan', 'FAN27G2846' => 'fan', 'FAN27G3524' => 'fan', 'FvH4_2g11770' => 'fve', 'FvH4_2g15630' => 'fve', 'FvH4_3g05570' => 'fve', 'FvH4_3g09110' => 'fve', 'FvH4_3g19940' => 'fve', 'FvH4_4g04821' => 'fve', 'FvH4_4g31480' => 'fve', 'FvH4_7g01740' => 'fve', 'Glyma.05G130400' => 'gma', 'Glyma.05G156400' => 'gma', 'Glyma.07G197000' => 'gma', 'Glyma.08G085151' => 'gma', 'Glyma.08G114500' => 'gma', 'Glyma.08G300400' => 'gma', 'Glyma.10G215800' => 'gma', 'Glyma.12G224400' => 'gma', 'Glyma.13G179300' => 'gma', 'Glyma.13G218151' => 'gma', 'Glyma.13G238800' => 'gma', 'Glyma.13G276900' => 'gma', 'Glyma.14G078200' => 'gma', 'Glyma.15G074500' => 'gma', 'Glyma.15G094100' => 'gma', 'Glyma.17G247200' => 'gma', 'Glyma.18G120100' => 'gma', 'Glyma.20G176000' => 'gma', 'Gohir.A01G063600' => 'ghi', 'Gohir.A01G170301' => 'ghi', 'Gohir.A02G060500' => 'ghi', 'Gohir.A05G133850' => 'ghi', 'Gohir.A05G161400' => 'ghi', 'Gohir.A06G012900' => 'ghi', 'Gohir.A06G035901' => 'ghi', 'Gohir.A06G127100' => 'ghi', 'Gohir.A06G210500' => 'ghi', 'Gohir.A08G008650' => 'ghi', 'Gohir.A09G072700' => 'ghi', 'Gohir.A09G088301' => 'ghi', 'Gohir.A10G040600' => 'ghi', 'Gohir.A12G036300' => 'ghi', 'Gohir.A12G143350' => 'ghi', 'Gohir.A12G165500' => 'ghi', 'Gohir.A13G145700' => 'ghi', 'Gohir.D01G050000' => 'ghi', 'Gohir.D01G051366' => 'ghi', 'Gohir.D01G161350' => 'ghi', 'Gohir.D02G065900' => 'ghi', 'Gohir.D05G164200' => 'ghi', 'Gohir.D05G355500' => 'ghi', 'Gohir.D06G010400' => 'ghi', 'Gohir.D06G111250' => 'ghi', 'Gohir.D06G132000' => 'ghi', 'Gohir.D06G210500' => 'ghi', 'Gohir.D07G165675' => 'ghi', 'Gohir.D08G062240' => 'ghi', 'Gohir.D08G086101' => 'ghi', 'Gohir.D08G138060' => 'ghi', 'Gohir.D09G072300' => 'ghi', 'Gohir.D10G041400' => 'ghi', 'Gohir.D11G191020' => 'ghi', 'Gohir.D11G212066' => 'ghi', 'Gohir.D12G036300' => 'ghi', 'Gohir.D12G168600' => 'ghi', 'Gohir.D13G150600' => 'ghi', 'Gorai.001G057300' => 'gra', 'Gorai.002G069900' => 'gra', 'Gorai.002G200000' => 'gra', 'Gorai.003G067600' => 'gra', 'Gorai.005G074800' => 'gra', 'Gorai.006G087300' => 'gra', 'Gorai.008G037500' => 'gra', 'Gorai.008G181400' => 'gra', 'Gorai.009G169400' => 'gra', 'Gorai.009G387900' => 'gra', 'Gorai.010G013300' => 'gra', 'Gorai.010G153800' => 'gra', 'Gorai.010G255800' => 'gra', 'Gorai.011G043700' => 'gra', 'Gorai.011G198900' => 'gra', 'Gorai.013G168400' => 'gra', 'GSVIVG01005212001' => 'vvi', 'GSVIVG01006163001' => 'vvi', 'GSVIVG01009625001' => 'vvi', 'GSVIVG01014338001' => 'vvi', 'GSVIVG01020005001' => 'vvi', 'GSVIVG01021450001' => 'vvi', 'GSVIVG01023975001' => 'vvi', 'GSVIVG01034490001' => 'vvi', 'HanXRQChr04g0112071' => 'han', 'HanXRQChr05g0131151' => 'han', 'HanXRQChr09g0262371' => 'han', 'HanXRQChr09g0268401' => 'han', 'HanXRQChr10g0279241' => 'han', 'HanXRQChr10g0297961' => 'han', 'HanXRQChr11g0326231' => 'han', 'HanXRQChr11g0328471' => 'han', 'HanXRQChr16g0507941' => 'han', 'HanXRQChr17g0560211' => 'han', 'Haze_02108' => 'cav', 'Haze_02428' => 'cav', 'Haze_05593' => 'cav', 'Haze_06448' => 'cav', 'Haze_09427' => 'cav', 'Haze_12022' => 'cav', 'Haze_17612' => 'cav', 'Haze_17928' => 'cav', 'Hma1.2p1_0032F.1_g019250' => 'hma', 'Hma1.2p1_0163F.1_g072690' => 'hma', 'Hma1.2p1_0265F.1_g106710' => 'hma', 'Hma1.2p1_0286F.1_g113970' => 'hma', 'Hma1.2p1_0363F.1_g136640' => 'hma', 'Hma1.2p1_0584F.1_g183470' => 'hma', 'Hma1.2p1_0885F.1_g232570' => 'hma', 'HPP92_006022' => 'vpl', 'HPP92_007320' => 'vpl', 'HPP92_011521' => 'vpl', 'HPP92_019387' => 'vpl', 'HPP92_024038' => 'vpl', 'Hund05891' => 'sun', 'Hund06450' => 'sun', 'Hund12053' => 'sun', 'Hund16800' => 'sun', 'Hund21222' => 'sun', 'Hund22896' => 'sun', 'Hund23746' => 'sun', 'Hund27083' => 'sun', 'Lalb_Chr02g0141831' => 'lal', 'Lalb_Chr02g0141841' => 'lal', 'Lalb_Chr05g0220411' => 'lal', 'Lalb_Chr06g0162081' => 'lal', 'Lalb_Chr09g0327651' => 'lal', 'Lalb_Chr13g0295051' => 'lal', 'Lalb_Chr15g0086801' => 'lal', 'Lalb_Chr16g0383781' => 'lal', 'Lalb_Chr16g0383791' => 'lal', 'Lalb_Chr18g0055441' => 'lal', 'Lalb_Chr18g0059611' => 'lal', 'Lalb_Chr20g0109661' => 'lal', 'Lalb_Chr20g0109831' => 'lal', 'Lalb_Chr20g0121871' => 'lal', 'Lalb_Chr22g0355361' => 'lal', 'Lalb_Chr25g0286371' => 'lal', 'Lj1A1187G43' => 'lonja', 'Lj1A1205T50' => 'lonja', 'Lj1A800G33' => 'lonja', 'Lj1C1187T7' => 'lonja', 'Lj1C843T11' => 'lonja', 'Lj1g0010940' => 'lja', 'Lj2A288T69' => 'lonja', 'Lj3g0024276' => 'lja', 'Lj4A47T76' => 'lonja', 'Lj4g0005805' => 'lja', 'Lj4g0006097' => 'lja', 'Lj4g0008528' => 'lja', 'Lj4g0024907' => 'lja', 'Lj5g0012472' => 'lja', 'Lj5g0018648' => 'lja', 'Lj6C789G1' => 'lonja', 'Lj6g0004000' => 'lja', 'Lj7A292G67' => 'lonja', 'Lj7A292T64' => 'lonja', 'Lj9A400T58' => 'lonja', 'Lsat_1_v5_gn_1_126181' => 'lsa', 'Lsat_1_v5_gn_4_123041' => 'lsa', 'Lsat_1_v5_gn_4_133620' => 'lsa', 'Lsat_1_v5_gn_4_53221' => 'lsa', 'Lsat_1_v5_gn_4_71961' => 'lsa', 'Lsat_1_v5_gn_7_105241' => 'lsa', 'Lsat_1_v5_gn_7_21361' => 'lsa', 'Lsat_1_v5_gn_7_28860' => 'lsa', 'Lsat_1_v5_gn_7_31260' => 'lsa', 'Lsat_1_v5_gn_8_52801' => 'lsa', 'Manes.02G191400' => 'mes', 'Manes.03G110100' => 'mes', 'Manes.04G071100' => 'mes', 'Manes.05G100500' => 'mes', 'Manes.05G164700' => 'mes', 'Manes.15G087000' => 'mes', 'Manes.15G121500' => 'mes', 'Manes.16G028300' => 'mes', 'Manes.17G046100' => 'mes', 'Manes.17G069800' => 'mes', 'Manes.18G100500' => 'mes', 'Mapoly0002s0109' => 'mpo', 'Mapoly0024s0007' => 'mpo', 'Mapoly0089s0032' => 'mpo', 'MBI04_g42241_MAGBIO' => 'mbi', 'MBI05_g11988_MAGBIO' => 'mbi', 'MBI05_g35452_MAGBIO' => 'mbi', 'MBI07_g30179_MAGBIO' => 'mbi', 'MBI07_g35859_MAGBIO' => 'mbi', 'MBI07_g35860_MAGBIO' => 'mbi', 'MBI07_g37166_MAGBIO' => 'mbi', 'MBI08_g18172_MAGBIO' => 'mbi', 'MBI09_g08441_MAGBIO' => 'mbi', 'MBI13_g01676_MAGBIO' => 'mbi', 'MBI14_g42955_MAGBIO' => 'mbi', 'MBI16_g13161_MAGBIO' => 'mbi', 'MBI17_g27204_MAGBIO' => 'mbi', 'MBI19_g21595_MAGBIO' => 'mbi', 'MD00G1148400' => 'mdo', 'MD02G1301200' => 'mdo', 'MD03G1227800' => 'mdo', 'MD05G1041100' => 'mdo', 'MD05G1124800' => 'mdo', 'MD05G1284000' => 'mdo', 'MD05G1338800' => 'mdo', 'MD05G1338900' => 'mdo', 'MD07G1022800' => 'mdo', 'MD10G1047500' => 'mdo', 'MD10G1127500' => 'mdo', 'MD10G1262300' => 'mdo', 'MD10G1293800' => 'mdo', 'MD16G1074300' => 'mdo', 'Medtr1g021670' => 'mtr', 'Medtr1g096320' => 'mtr', 'Medtr2g013690' => 'mtr', 'Medtr2g019450' => 'mtr', 'Medtr2g085170' => 'mtr', 'Medtr4g088785' => 'mtr', 'Medtr8g055930' => 'mtr', 'Medtr8g085850' => 'mtr', 'MELO3C002605.2' => 'cme', 'MELO3C003891.2' => 'cme', 'MELO3C004012.2' => 'cme', 'MELO3C007134.2' => 'cme', 'MELO3C008118.2' => 'cme', 'MELO3C016700.2' => 'cme', 'MELO3C024127.2' => 'cme', 'MELO3C033361.2' => 'cme', 'MELO3C033362.2' => 'cme', 'Migut.C00430' => 'egut', 'Migut.C01246' => 'egut', 'Migut.E00101' => 'egut', 'Migut.H01486' => 'egut', 'Migut.H01939' => 'egut', 'Migut.K00360' => 'egut', 'Migut.M00910' => 'egut', 'Migut.M01139' => 'egut', 'Migut.N02677' => 'egut', 'MSTRG.13252' => 'ama', 'MSTRG.14701' => 'ama', 'MSTRG.1521' => 'ama', 'MSTRG.15884' => 'ama', 'MSTRG.16242' => 'ama', 'MSTRG.22285' => 'ama', 'MSTRG.22444' => 'ama', 'MSTRG.2349' => 'ama', 'MSTRG.26308' => 'ama', 'MSTRG.28296' => 'ama', 'MSTRG.9895' => 'ama', 'Nitab4.5_0000110g0060' => 'nta', 'Nitab4.5_0000420g0130' => 'nta', 'Nitab4.5_0000422g0030' => 'nta', 'Nitab4.5_0000560g0180' => 'nta', 'Nitab4.5_0000703g0100' => 'nta', 'Nitab4.5_0000786g0200' => 'nta', 'Nitab4.5_0001336g0020' => 'nta', 'Nitab4.5_0001796g0030' => 'nta', 'Nitab4.5_0003348g0060' => 'nta', 'Nitab4.5_0003698g0040' => 'nta', 'Nitab4.5_0003942g0090' => 'nta', 'Nitab4.5_0004775g0070' => 'nta', 'Nitab4.5_0004864g0030' => 'nta', 'Nitab4.5_0005615g0020' => 'nta', 'Nitab4.5_0009288g0030' => 'nta', 'Nitab4.5_0009341g0010' => 'nta', 'Nitab4.5_0009535g0010' => 'nta', 'Nn1g03995' => 'nnu', 'Nn1g04100' => 'nnu', 'Nn1g06530' => 'nnu', 'Nn3g16404' => 'nnu', 'Nn3g17212' => 'nnu', 'Nn3g20776' => 'nnu', 'Nn3g21923' => 'nnu', 'Nn5g27737' => 'nnu', 'Nn5g29461' => 'nnu', 'Nn7g38355' => 'nnu', 'Nn8g39873' => 'nnu', 'Oeu000548.2' => 'oeu', 'Oeu004672.1' => 'oeu', 'Oeu015605.2' => 'oeu', 'Oeu016092.1' => 'oeu', 'Oeu017879.3' => 'oeu', 'Oeu024910.1' => 'oeu', 'Oeu028965.1' => 'oeu', 'Oeu031269.1' => 'oeu', 'Oeu031270.1' => 'oeu', 'Oeu032535.1' => 'oeu', 'Oeu034151.1' => 'oeu', 'Oeu034152.1' => 'oeu', 'Oeu034588.2' => 'oeu', 'Oeu050846.1' => 'oeu', 'Oeu050849.2' => 'oeu', 'Oeu051063.2' => 'oeu', 'Oeu052368.1' => 'oeu', 'Oeu052370.1' => 'oeu', 'Os01g0210400' => 'osa', 'Os01g0304300' => 'osa', 'Os01g0749100' => 'osa', 'Os02g0745800' => 'osa', 'Os03g0769050' => 'osa', 'Os05g0531500' => 'osa', 'Os06g0724300' => 'osa', 'Os11g0198100' => 'osa', 'Peaxi162Scf00069g01425' => 'pax', 'Peaxi162Scf00280g00811' => 'pax', 'Peaxi162Scf00310g00615' => 'pax', 'Peaxi162Scf00362g00542' => 'pax', 'Peaxi162Scf00461g00310' => 'pax', 'Peaxi162Scf00530g00118' => 'pax', 'Peaxi162Scf00541g00057' => 'pax', 'Peaxi162Scf00661g00017' => 'pax', 'Peaxi162Scf00926g00027' => 'pax', 'Peaxi162Scf01064g00263' => 'pax', 'Peaxi162Scf01211g00135' => 'pax', 'PGR004G2336' => 'pgr', 'PGR042G0327' => 'pgr', 'PGR042G1957' => 'pgr', 'PGR042G2003' => 'pgr', 'PGR042G3929' => 'pgr', 'PGR083G1137' => 'pgr', 'PGR083G1364' => 'pgr', 'PGSC0003DMG400003381' => 'stu', 'PGSC0003DMG400003417' => 'stu', 'PGSC0003DMG400008981' => 'stu', 'PGSC0003DMG400012417' => 'stu', 'PGSC0003DMG400012823' => 'stu', 'PGSC0003DMG400016885' => 'stu', 'PGSC0003DMG400022812' => 'stu', 'PGSC0003DMG400029726' => 'stu', 'PGSC0003DMG401009243' => 'stu', 'PGSC0003DMG401031505' => 'stu', 'PGSC0003DMG402031505' => 'stu', 'Phvul.001G017600' => 'pvu', 'Phvul.002G193500' => 'pvu', 'Phvul.002G228900' => 'pvu', 'Phvul.002G236800' => 'pvu', 'Phvul.003G049500' => 'pvu', 'Phvul.005G072000' => 'pvu', 'Phvul.006G164800' => 'pvu', 'Phvul.006G185100' => 'pvu', 'Phvul.007G090000' => 'pvu', 'Potri.001G399800' => 'ptr', 'Potri.002G149900' => 'ptr', 'Potri.004G044100' => 'ptr', 'Potri.004G177600' => 'ptr', 'Potri.009G138000' => 'ptr', 'Potri.010G094000' => 'ptr', 'Potri.011G053000' => 'ptr', 'Potri.011G119300' => 'ptr', 'Potri.013G113700' => 'ptr', 'Potri.018G107800' => 'ptr', 'Potri.019G084100' => 'ptr', 'Pp3c14_23720' => 'ppa', 'Pp3c16_6340' => 'ppa', 'Pp3c23_13420' => 'ppa', 'Pp3c24_2740' => 'ppa', 'Pp3c25_860' => 'ppa', 'Pp3c8_21750' => 'ppa', 'Prupe.1G273000' => 'ppe', 'Prupe.1G273700' => 'ppe', 'Prupe.1G274100' => 'ppe', 'Prupe.2G023300' => 'ppe', 'Prupe.4G048000' => 'ppe', 'Prupe.4G080400' => 'ppe', 'Prupe.4G181200' => 'ppe', 'Prupe.8G056900' => 'ppe', 'Prupe.8G168700' => 'ppe', 'Psat1g189080' => 'psa', 'Psat1g204760' => 'psa', 'Psat4g175560' => 'psa', 'Psat4g177720' => 'psa', 'Psat5g244240' => 'psa', 'Psat6g010720' => 'psa', 'Psat6g187200' => 'psa', 'Psat7g072040' => 'psa', 'PSO017G3501' => 'pso', 'PSO063G2148' => 'pso', 'PSO063G5608' => 'pso', 'PSO210G6392' => 'pso', 'PSO541G2319' => 'pso', 'PSO541G2836' => 'pso', 'PSO541G4012' => 'pso', 'PSO541G6253' => 'pso', 'PSO675G0580' => 'pso', 'PSO675G0856' => 'pso', 'PSO675G5635' => 'pso', 'PSO675G9157' => 'pso', 'PSO832G1660' => 'pso', 'PSO832G1969' => 'pso', 'QL02p007186' => 'qlo', 'QL02p033904' => 'qlo', 'QL03p064391' => 'qlo', 'QL05p040593' => 'qlo', 'QL05p058242' => 'qlo', 'QL08p021825' => 'qlo', 'QL11p004981' => 'qlo', 'RcHm_v2.0_Chr1g0318301' => 'rch', 'RcHm_v2.0_Chr4g0418501' => 'rch', 'RcHm_v2.0_Chr4g0439971' => 'rch', 'RcHm_v2.0_Chr5g0008541' => 'rch', 'RcHm_v2.0_Chr5g0014101' => 'rch', 'RcHm_v2.0_Chr5g0014131' => 'rch', 'RcHm_v2.0_Chr5g0033621' => 'rch', 'RcHm_v2.0_Chr6g0272041' => 'rch', 'RcHm_v2.0_Chr6g0278831' => 'rch', 'Rhsim02G0130400' => 'rsi', 'Rhsim02G0171100' => 'rsi', 'Rhsim05G0053000' => 'rsi', 'Rhsim05G0053100' => 'rsi', 'Rhsim06G0096500' => 'rsi', 'Rhsim06G0096600' => 'rsi', 'Rhsim06G0199100' => 'rsi', 'Rhsim12G0062300' => 'rsi', 'Rhsim12G0062800' => 'rsi', 'Sabra02G0118600' => 'sbr', 'Sabra04G0027300' => 'sbr', 'Sabra04G0119500' => 'sbr', 'Sabra08G0112500' => 'sbr', 'Sabra11G0036800' => 'sbr', 'Sabra11G0103800' => 'sbr', 'Sabra13G0096300' => 'sbr', 'Sabra16G0262300' => 'sbr', 'Sabra18G0091700' => 'sbr', 'Sabra19G0095400' => 'sbr', 'SalBow6G3080' => 'sbo', 'SalBow7G1157' => 'sbo', 'SalBow7G2123' => 'sbo', 'SalBow7G2285' => 'sbo', 'SalBow7G3537' => 'sbo', 'SalBow8G2947' => 'sbo', 'SalBow8G4463' => 'sbo', 'SalBow8G5466' => 'sbo', 'Sc01g0001750' => 'sci', 'Sc02g0006640' => 'sci', 'Sc02g0006670' => 'sci', 'Sc04g0008220' => 'sci', 'Sc05g0006190' => 'sci', 'Sc08g0002760' => 'sci', 'Sc17g0006170' => 'sci', 'Sc22g0002050' => 'sci', 'Sc23g0001190' => 'sci', 'Sc24g0000980' => 'sci', 'Sed0006245' => 'sed', 'Sed0007543' => 'sed', 'Sed0009411' => 'sed', 'Sed0010765' => 'sed', 'Sed0012944' => 'sed', 'Sed0014682' => 'sed', 'Sed0016174' => 'sed', 'Sed0016796' => 'sed', 'Sed0020317' => 'sed', 'Sed0021467' => 'sed', 'SEGI_01316' => 'sgi', 'SEGI_03374' => 'sgi', 'SEGI_16265' => 'sgi', 'SEGI_18569' => 'sgi', 'SEGI_20351' => 'sgi', 'SEGI_26395' => 'sgi', 'SEGI_29469' => 'sgi', 'SEGI_34771' => 'sgi', 'SEGI_36769' => 'sgi', 'SEGI_37139' => 'sgi', 'SGA_v2.0_scaffold100G29687' => 'sas', 'SGA_v2.0_scaffold118G32472' => 'sas', 'SGA_v2.0_scaffold14G07051' => 'sas', 'SGA_v2.0_scaffold183G39845' => 'sas', 'SGA_v2.0_scaffold1G00174' => 'sas', 'SGA_v2.0_scaffold22G09714' => 'sas', 'SGA_v2.0_scaffold333G48992' => 'sas', 'SGA_v2.0_scaffold46G17491' => 'sas', 'SGA_v2.0_scaffold49G18294' => 'sas', 'SGA_v2.0_scaffold63G21658' => 'sas', 'SHI01741' => 'shi', 'SHI05771' => 'shi', 'SHI18077' => 'shi', 'SHI20525' => 'shi', 'SHI20527' => 'shi', 'SHI20528' => 'shi', 'SMO172G0185' => 'smo', 'SMO198G0020' => 'smo', 'SMO351G0006' => 'smo', 'SMO356G0118' => 'smo', 'SMO358G0296' => 'smo', 'SMO367G0079' => 'smo', 'SMO367G1277' => 'smo', 'Solyc01g014220.3' => 'sly', 'Solyc01g111770.2' => 'sly', 'Solyc02g078180.3' => 'sly', 'Solyc03g006430.3' => 'sly', 'Solyc03g006456.1' => 'sly', 'Solyc03g079860.2' => 'sly', 'Solyc04g079770.3' => 'sly', 'Solyc05g007430.4' => 'sly', 'Solyc07g063150.3' => 'sly', 'Solyc08g016620.3' => 'sly', 'Solyc09g057590.3' => 'sly', 'Solyc09g057600.1' => 'sly', 'Solyc10g009050.3' => 'sly', 'Solyc11g017420.2' => 'sly', 'Sopen01g053810' => 'spe', 'Sopen02g023040' => 'spe', 'Sopen03g002440' => 'spe', 'Sopen04g033350' => 'spe', 'Sopen05g003310' => 'spe', 'Sopen07g004050' => 'spe', 'Sopen07g031340' => 'spe', 'Sopen08g006990' => 'spe', 'Sopen10g004830' => 'spe', 'Sopen11g009370' => 'spe', 'Sp1g24450' => 'spa', 'Sp1g29670' => 'spa', 'Sp1g39600' => 'spa', 'Sp2g11080' => 'spa', 'Sp2g13970' => 'spa', 'Sp4g16130' => 'spa', 'Sp6g13080' => 'spa', 'Sp7g37270' => 'spa', 'TAR371G0065' => 'tar', 'TAR376G0340' => 'tar', 'TAR376G0435' => 'tar', 'TAR381G0002' => 'tar', 'TAR381G1236' => 'tar', 'TAR624G0055' => 'tar', 'TAR624G0324' => 'tar', 'TAR624G0696' => 'tar', 'TAR624G0906' => 'tar', 'TAR625G0107' => 'tar', 'TAR626G0015' => 'tar', 'TAR626G1356' => 'tar', 'TAR627G0888' => 'tar', 'TAR628G0399' => 'tar', 'TAR628G1327' => 'tar', 'TAR629G2831' => 'tar', 'TAR629G2874' => 'tar', 'TAR633G1432' => 'tar', 'TAR633G2771' => 'tar', 'THA.LOC104803394' => 'tha', 'THA.LOC104805153' => 'tha', 'THA.LOC104806784' => 'tha', 'THA.LOC104810473' => 'tha', 'THA.LOC104813100' => 'tha', 'THA.LOC104814215' => 'tha', 'THA.LOC104815554' => 'tha', 'THA.LOC104820544' => 'tha', 'THA.LOC104824754' => 'tha', 'THA.LOC104827717' => 'tha', 'Thecc.02G031400' => 'tca', 'Thecc.02G055900' => 'tca', 'Thecc.02G350800' => 'tca', 'Thecc.06G150900' => 'tca', 'Thecc.06G186600' => 'tca', 'Thecc.07G089600' => 'tca', 'Thecc.08G020400' => 'tca', 'Thecc.08G182100' => 'tca', 'Thhalv10000873m.g' => 'esa', 'Thhalv10004185m.g' => 'esa', 'Thhalv10006981m.g' => 'esa', 'Thhalv10007204m.g' => 'esa', 'Thhalv10011374m.g' => 'esa', 'Thhalv10013482m.g' => 'esa', 'Thhalv10017801m.g' => 'esa', 'Thhalv10024983m.g' => 'esa', 'TPR.G12072' => 'tpr', 'TPR.G15769' => 'tpr', 'TPR.G16504' => 'tpr', 'TPR.G16506' => 'tpr', 'TPR.G24345' => 'tpr', 'TPR.G26666' => 'tpr', 'TPR.G27320' => 'tpr', 'TPR.G31819' => 'tpr', 'TPR.G38879' => 'tpr', 'TPR.G39015' => 'tpr', 'TPR.G8819' => 'tpr', 'TWI09G0924' => 'twi', 'TWI12G0811' => 'twi', 'TWI12G1294' => 'twi', 'TWI31G0150' => 'twi', 'TWI36G1262' => 'twi', 'TWI38G1287' => 'twi', 'TWI38G1633' => 'twi', 'TWI38G1982' => 'twi', 'TWI39G0116' => 'twi', 'TWI60G1011' => 'twi', 'TWI63G0171' => 'twi', 'TWI73G0839' => 'twi', 'TWI79G1511' => 'twi', 'unitig_0.g915' => 'ugi', 'unitig_0.g916' => 'ugi', 'unitig_21.g20219' => 'ugi', 'unitig_21.g20416' => 'ugi', 'unitig_578.g16132' => 'ugi', 'unitig_578.g16718' => 'ugi', 'unitig_62.g23481' => 'ugi', 'unitig_744.g24535' => 'ugi', 'unitig_749.g13525' => 'ugi', 'vmacro01248' => 'vma', 'vmacro02290' => 'vma', 'vmacro10946' => 'vma', 'vmacro11865' => 'vma', 'vmacro12493' => 'vma', 'vmacro17322' => 'vma', 'vmacro21599' => 'vma', 'vmacro23041' => 'vma', 'VMungo0251G0004' => 'vmu', 'VMungo0251G2639' => 'vmu', 'VMungo0251G2967' => 'vmu', 'VMungo0540G0864' => 'vmu', 'VMungo0540G1569' => 'vmu', 'VMungo0647G0317' => 'vmu', 'VMungo0720G1373' => 'vmu', 'VMungo0720G1508' => 'vmu', 'VMungo1080G0485' => 'vmu', 'VMungo1215G3177' => 'vmu', 'Zm00001eb112600' => 'zma', 'Zm00001eb120220' => 'zma', 'Zm00001eb153240' => 'zma', 'Zm00001eb168880' => 'zma', 'Zm00001eb213920' => 'zma', 'Zm00001eb228280' => 'zma', 'Zm00001eb254580' => 'zma', 'Zm00001eb272180' => 'zma', 'Zm00001eb293190' => 'zma', 'Zm00001eb322930' => 'zma', 'Zm00001eb353360' => 'zma', 'Zm00001eb353390' => 'zma', 'Zm00001eb353430' => 'zma', 'Zm00001eb353440' => 'zma', 'Zm00001eb353780' => 'zma' ) $gf_id = 'HOM05D000499' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000499' ) $data_identifier = 'HOM05D000499' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 29, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 12, 'amhyb' => (int) 8, 'aly' => (int) 12, 'aox' => (int) 9, 'arhy' => (int) 26, 'ath' => (int) 8, 'atr' => (int) 7, 'acertr' => (int) 10, 'cqu' => (int) 15, 'bca' => (int) 29, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 11, 'cansat' => (int) 8, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 9, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 8, 'cpa' => (int) 10, 'csa' => (int) 7, 'camsi' => (int) 20, 'dca' => (int) 8, 'din' => (int) 12, 'dzi' => (int) 14, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 6, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 38, 'gra' => (int) 16, 'vvi' => (int) 8, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 5, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 11, 'lja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 11, 'mpo' => (int) 3, 'mbi' => (int) 14, 'mdo' => (int) 14, 'mtr' => (int) 8, 'cme' => (int) 9, 'egut' => (int) 9, 'ama' => (int) 11, 'nta' => (int) 17, 'nnu' => (int) 11, 'oeu' => (int) 18, 'osa' => (int) 8, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 6, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 9, 'rsi' => (int) 9, 'sbr' => (int) 10, 'sbo' => (int) 8, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 10, 'sas' => (int) 10, 'shi' => (int) 6, 'smo' => (int) 7, 'sly' => (int) 14, 'spe' => (int) 10, 'spa' => (int) 8, 'tar' => (int) 19, 'tha' => (int) 10, 'tca' => (int) 8, 'esa' => (int) 8, 'tpr' => (int) 11, 'twi' => (int) 13, 'ugi' => (int) 9, 'vma' => (int) 8, 'vmu' => (int) 10, 'zma' => (int) 15 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb353780' $species_info = array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ) $local_species = 'qlo' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000499', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1066', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p29780' => 'bna', 'A02p33180' => 'bna', 'A03p16470' => 'bna', 'A03p66010' => 'bna', 'A04p25970' => 'bna', 'A06p01270' => 'bna', 'A06p46080' => 'bna', 'A07p11400' => 'bna', 'A08p01840' => 'bna', 'A08p08230' => 'bna', 'A08p25740' => 'bna', 'A09p32070' => 'bna', 'A09p37830' => 'bna', 'A09p42840' => 'bna', 'A09p42850' => 'bna', 'Aa31LG10G2060' => 'aar', 'Aa31LG2G7410' => 'aar', 'Aa31LG6G10200' => 'aar', 'Aa31LG6G16680' => 'aar', 'Aa31LG6G8470' => 'aar', 'Aa31LG9G12730' => 'aar', 'Aa31LG9G13680' => 'aar', 'Aa31LG9G14920' => 'aar', 'Aa31LG9G6650' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4977' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5467' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3254' => 'aag', 'Actinidia02578' => 'ach', 'Actinidia07693' => 'ach', 'Actinidia08413' => 'ach', 'Actinidia08414' => 'ach', 'Actinidia15289' => 'ach', 'Actinidia19871' => 'ach', 'Actinidia21475' => 'ach', 'Actinidia22576' => 'ach', 'Actinidia28327' => 'ach', 'Actinidia32491' => 'ach', 'Actinidia39463' => 'ach', 'Actinidia39571' => 'ach', 'Ah.01g013750' => 'amhyb', 'Ah.01g023210' => 'amhyb', 'Ah.04g164850' => 'amhyb', 'Ah.05g178060' => 'amhyb', 'Ah.07g204270' => 'amhyb', 'Ah.07g208480' => 'amhyb', 'Ah.09g237410' => 'amhyb', 'Ah.14g089460' => 'amhyb', 'AL1G41790' => 'aly', 'AL1G49050' => 'aly', 'AL1G53810' => 'aly', 'AL1G61400' => 'aly', 'AL4G18580' => 'aly', 'AL5G12510' => 'aly', 'AL5G12540' => 'aly', 'AL6G43230' => 'aly', 'AL7G10370' => 'aly', 'AL7G19250' => 'aly', 'AL8G12240' => 'aly', 'AL8G18540' => 'aly', 'Aqoxy1G02409' => 'aox', 'Aqoxy2G03993' => 'aox', 'Aqoxy3G03357' => 'aox', 'Aqoxy4G00785' => 'aox', 'Aqoxy5G02598' => 'aox', 'Aqoxy6G00132' => 'aox', 'Aqoxy7G01776' => 'aox', 'Aqoxy7G02316' => 'aox', 'Aqoxy7G03973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.12AFKW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B8730' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27IQR1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3F75VG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3RE0GA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41TCQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.527VTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FIR39' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5W8UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DA38EV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ63HS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H1I32C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HC27T5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4M8AP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7N3CZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9UVDZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LS1NQA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT1D4B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SKC4TM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCFV76' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF9Q1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQWD9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1ZM88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WE07RT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YCK7VH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJE6Q6' => 'arhy', 'AT1G28240' => 'ath', 'AT1G34550' => 'ath', 'AT1G53040' => 'ath', 'AT2G02910' => 'ath', 'AT4G09630' => 'ath', 'AT4G38500' => 'ath', 'AT5G42660' => 'ath', 'AT5G46220' => 'ath', 'ATR0152G026' => 'atr', 'ATR0564G343' => 'atr', 'ATR0706G151' => 'atr', 'ATR0733G207' => 'atr', 'ATR0751G234' => 'atr', 'ATR0807G048' => 'atr', 'ATR1091G084' => 'atr', 'Atru.chr10.1229' => 'acertr', 'Atru.chr10.1230' => 'acertr', 'Atru.chr10.1874' => 'acertr', 'Atru.chr11.1808' => 'acertr', 'Atru.chr13.1795' => 'acertr', 'Atru.chr13.570' => 'acertr', 'Atru.chr2.2608' => 'acertr', 'Atru.chr2.2609' => 'acertr', 'Atru.chr5.3428' => 'acertr', 'Atru.chr8.1171' => 'acertr', 'AUR62004651' => 'cqu', 'AUR62008675' => 'cqu', 'AUR62010014' => 'cqu', 'AUR62013004' => 'cqu', 'AUR62014825' => 'cqu', 'AUR62015015' => 'cqu', 'AUR62015151' => 'cqu', 'AUR62017020' => 'cqu', 'AUR62019422' => 'cqu', 'AUR62023570' => 'cqu', 'AUR62025571' => 'cqu', 'AUR62029098' => 'cqu', 'AUR62033863' => 'cqu', 'AUR62034296' => 'cqu', 'AUR62040075' => 'cqu', 'BcaB02g07334' => 'bca', 'BcaB02g10575' => 'bca', 'BcaB03g12119' => 'bca', 'BcaB03g12120' => 'bca', 'BcaB03g13945' => 'bca', 'BcaB04g17123' => 'bca', 'BcaB04g17867' => 'bca', 'BcaB04g19839' => 'bca', 'BcaB07g30317' => 'bca', 'BcaB07g32432' => 'bca', 'BcaB07g33362' => 'bca', 'BcaB08g36611' => 'bca', 'BcaC01g00028' => 'bca', 'BcaC01g01356' => 'bca', 'BcaC01g02034' => 'bca', 'BcaC01g06051' => 'bca', 'BcaC03g16839' => 'bca', 'BcaC03g17176' => 'bca', 'BcaC05g26829' => 'bca', 'BcaC06g31490' => 'bca', 'BcaC06g35344' => 'bca', 'BcaC06g36570' => 'bca', 'BcaC07g37537' => 'bca', 'BcaC08g43491' => 'bca', 'BcaC08g43773' => 'bca', 'BcaNung00234' => 'bca', 'BcaNung01982' => 'bca', 'BcaNung03707' => 'bca', 'BcaNung06454' => 'bca', 'BolC2t10762H' => 'bol', 'BolC2t11191H' => 'bol', 'BolC3t14322H' => 'bol', 'BolC3t19747H' => 'bol', 'BolC3t21425H' => 'bol', 'BolC4t27800H' => 'bol', 'BolC5t31423H' => 'bol', 'BolC6t35951H' => 'bol', 'BolC6t36282H' => 'bol', 'BolC7t40678H' => 'bol', 'BolC7t40679H' => 'bol', 'BolC7t42222H' => 'bol', 'BolC7t43492H' => 'bol', 'BolC7t46785H' => 'bol', 'BolC8t47853H' => 'bol', 'BolC9t56805H' => 'bol', 'BraA02t08000Z' => 'bra', 'BraA02t08341Z' => 'bra', 'BraA03t10936Z' => 'bra', 'BraA03t15657Z' => 'bra', 'BraA04t18100Z' => 'bra', 'BraA05t20523Z' => 'bra', 'BraA06t23353Z' => 'bra', 'BraA06t27473Z' => 'bra', 'BraA06t27769Z' => 'bra', 'BraA07t28928Z' => 'bra', 'BraA08t32236Z' => 'bra', 'BraA08t32841Z' => 'bra', 'BraA08t34524Z' => 'bra', 'BraA09t38742Z' => 'bra', 'BraA09t39295Z' => 'bra', 'C02p47180' => 'bna', 'C02p50990' => 'bna', 'C03p19360' => 'bna', 'C03p74950' => 'bna', 'C03p91000' => 'bna', 'C04p63260' => 'bna', 'C05p27050' => 'bna', 'C06p08750' => 'bna', 'C06p11490' => 'bna', 'C07p02820' => 'bna', 'C07p17180' => 'bna', 'C07p29440' => 'bna', 'C07p63730' => 'bna', 'C09p39260' => 'bna', 'CAN.G1164.34' => 'can', 'CAN.G1164.39' => 'can', 'CAN.G1530.3' => 'can', 'CAN.G162.61' => 'can', 'CAN.G176.6' => 'can', 'CAN.G289.49' => 'can', 'CAN.G370.21' => 'can', 'CAN.G370.22' => 'can', 'CAN.G371.117' => 'can', 'CAN.G58.37' => 'can', 'CAN.G588.98' => 'can', 'CANSAT21G2266' => 'cansat', 'CANSAT25G2799' => 'cansat', 'CANSAT35G0862' => 'cansat', 'CANSAT35G1704' => 'cansat', 'CANSAT35G1760' => 'cansat', 'CANSAT56G3971' => 'cansat', 'CANSAT56G4116' => 'cansat', 'CANSAT80G1259' => 'cansat', 'CARHR027730' => 'chi', 'CARHR033880' => 'chi', 'CARHR043270' => 'chi', 'CARHR145330' => 'chi', 'CARHR145340' => 'chi', 'CARHR175570' => 'chi', 'CARHR181570' => 'chi', 'CARHR258470' => 'chi', 'CARHR260490' => 'chi', 'CARHR294220' => 'chi', 'Carub.0001s2668' => 'cru', 'Carub.0001s3257' => 'cru', 'Carub.0001s4220' => 'cru', 'Carub.0005s0179' => 'cru', 'Carub.0006s2807' => 'cru', 'Carub.0007s0039' => 'cru', 'Carub.0008s0169' => 'cru', 'Carub.0008s0636' => 'cru', 'Ca_00338_v3' => 'car', 'Ca_00542_v3' => 'car', 'Ca_01844_v3' => 'car', 'Ca_10611_v3' => 'car', 'Ca_13326_v3' => 'car', 'Ca_17944_v3' => 'car', 'Ca_18546_v3' => 'car', 'Ca_24219_v3' => 'car', 'Ca_29972_v3' => 'car', 'CBR_g3681' => 'cbr', 'CBR_g40021' => 'cbr', 'Cc01_g08140' => 'ccan', 'Cc02_g13410' => 'ccan', 'Cc02_g37480' => 'ccan', 'Cc05_g12030' => 'ccan', 'Cc09_g03370' => 'ccan', 'Cc09_g10300' => 'ccan', 'Cc10_g03530' => 'ccan', 'Cc10_g11380' => 'ccan', 'CDE01G0176' => 'cde', 'CDE02G0675' => 'cde', 'CDE02G0942' => 'cde', 'CDE02G1153' => 'cde', 'CDE02G4177' => 'cde', 'CDE04G2117' => 'cde', 'CDE04G2736' => 'cde', 'CDE08G1161' => 'cde', 'CDE09G1238' => 'cde', 'Cfa000467' => 'cfa', 'Cfa000947' => 'cfa', 'Cfa004969' => 'cfa', 'Cfa005284' => 'cfa', 'Cfa008993' => 'cfa', 'Cfa018187' => 'cfa', 'Cfa018454' => 'cfa', 'Cfa020585' => 'cfa', 'Ciclev10000424m.g' => 'ccl', 'Ciclev10003605m.g' => 'ccl', 'Ciclev10007828m.g' => 'ccl', 'Ciclev10014620m.g' => 'ccl', 'Ciclev10015169m.g' => 'ccl', 'Ciclev10018291m.g' => 'ccl', 'Ciclev10028256m.g' => 'ccl', 'Ciclev10033822m.g' => 'ccl', 'CiPaw.05G060300' => 'cil', 'CiPaw.05G085000' => 'cil', 'CiPaw.06G083700' => 'cil', 'CiPaw.06G120300' => 'cil', 'CiPaw.09G060500' => 'cil', 'CiPaw.09G123800' => 'cil', 'CiPaw.11G169700' => 'cil', 'CiPaw.12G118300' => 'cil', 'CiPaw.15G071000' => 'cil', 'CiPaw.15G081900' => 'cil', 'ClCG01G024610' => 'cla', 'ClCG03G006070' => 'cla', 'ClCG05G019250' => 'cla', 'ClCG09G009500' => 'cla', 'ClCG11G008200' => 'cla', 'ClCG11G018080' => 'cla', 'COL.COLO4_17373' => 'col', 'COL.COLO4_22994' => 'col', 'COL.COLO4_26389' => 'col', 'COL.COLO4_27170' => 'col', 'COL.COLO4_31074' => 'col', 'COL.COLO4_31465' => 'col', 'COL.COLO4_36438' => 'col', 'COL.COLO4_36439' => 'col', 'Cpa.g.c38781' => 'cpa', 'Cpa.g.sc128.12' => 'cpa', 'Cpa.g.sc166.7' => 'cpa', 'Cpa.g.sc166.8' => 'cpa', 'Cpa.g.sc20.111' => 'cpa', 'Cpa.g.sc27.31' => 'cpa', 'Cpa.g.sc64.36' => 'cpa', 'Cpa.g.sc64.37' => 'cpa', 'Cpa.g.sc66.49' => 'cpa', 'Cpa.g.sc80.64' => 'cpa', 'CsaV3_1G012320' => 'csa', 'CsaV3_2G008480' => 'csa', 'CsaV3_2G033450' => 'csa', 'CsaV3_3G044830' => 'csa', 'CsaV3_4G033710' => 'csa', 'CsaV3_6G051730' => 'csa', 'CsaV3_7G025350' => 'csa', 'CSS0001067' => 'camsi', 'CSS0005996' => 'camsi', 'CSS0006590' => 'camsi', 'CSS0009673' => 'camsi', 'CSS0010201' => 'camsi', 'CSS0010549' => 'camsi', 'CSS0011364' => 'camsi', 'CSS0014473' => 'camsi', 'CSS0014961' => 'camsi', 'CSS0020191' => 'camsi', 'CSS0021165' => 'camsi', 'CSS0022306' => 'camsi', 'CSS0030591' => 'camsi', 'CSS0030696' => 'camsi', 'CSS0032653' => 'camsi', 'CSS0037487' => 'camsi', 'CSS0041102' => 'camsi', 'CSS0041261' => 'camsi', 'CSS0046246' => 'camsi', 'CSS0049256' => 'camsi', 'DCAR_004075' => 'dca', 'DCAR_011538' => 'dca', 'DCAR_019553' => 'dca', 'DCAR_020952' => 'dca', 'DCAR_021739' => 'dca', 'DCAR_027407' => 'dca', 'DCAR_027913' => 'dca', 'DCAR_028066' => 'dca', 'Dinv05899' => 'din', 'Dinv07563' => 'din', 'Dinv08010' => 'din', 'Dinv14125' => 'din', 'Dinv20172' => 'din', 'Dinv30743' => 'din', 'Dinv31229' => 'din', 'Dinv34162' => 'din', 'Dinv36028' => 'din', 'Dinv39368' => 'din', 'Dinv40565' => 'din', 'Dinv41706' => 'din', 'Duzib052G0089' => 'dzi', 'Duzib116G0641' => 'dzi', 'Duzib132G0069' => 'dzi', 'Duzib132G1219' => 'dzi', 'Duzib147G0278' => 'dzi', 'Duzib160G0480' => 'dzi', 'Duzib170G0661' => 'dzi', 'Duzib177G0591' => 'dzi', 'Duzib187G1353' => 'dzi', 'Duzib192G0858' => 'dzi', 'Duzib192G0883' => 'dzi', 'Duzib213G0506' => 'dzi', 'Duzib235G0289' => 'dzi', 'Duzib251G0422' => 'dzi', 'ECA232G3898' => 'eca', 'ECA233G5950' => 'eca', 'ECA234G1699' => 'eca', 'ECA234G2421' => 'eca', 'ECA236G0426' => 'eca', 'ECA236G4331' => 'eca', 'ECA248G2573' => 'eca', 'EL10Ac1g00077' => 'bvu', 'EL10Ac1g01746' => 'bvu', 'EL10Ac2g03464' => 'bvu', 'EL10Ac4g08176' => 'bvu', 'EL10Ac7g17521' => 'bvu', 'EL10Ac8g20386' => 'bvu', 'EL10Ac9g21343' => 'bvu', 'EL10Ac9g22688' => 'bvu', 'Eucgr.B03434' => 'egr', 'Eucgr.D00618' => 'egr', 'Eucgr.E02395' => 'egr', 'Eucgr.F01129' => 'egr', 'Eucgr.F02622' => 'egr', 'Eucgr.F04207' => 'egr', 'FAN01G0570' => 'fan', 'FAN03G3351' => 'fan', 'FAN06G3702' => 'fan', 'FAN07G2149' => 'fan', 'FAN10G3758' => 'fan', 'FAN11G1170' => 'fan', 'FAN11G2050' => 'fan', 'FAN11G2724' => 'fan', 'FAN12G1700' => 'fan', 'FAN12G2028' => 'fan', 'FAN15G1160' => 'fan', 'FAN15G3063' => 'fan', 'FAN16G2540' => 'fan', 'FAN16G3077' => 'fan', 'FAN16G3624' => 'fan', 'FAN17G0221' => 'fan', 'FAN20G2492' => 'fan', 'FAN20G2905' => 'fan', 'FAN21G0548' => 'fan', 'FAN21G1300' => 'fan', 'FAN22G0077' => 'fan', 'FAN22G1315' => 'fan', 'FAN24G1280' => 'fan', 'FAN24G1445' => 'fan', 'FAN24G3527' => 'fan', 'FAN25G0464' => 'fan', 'FAN25G2885' => 'fan', 'FAN25G3270' => 'fan', 'FAN27G1101' => 'fan', 'FAN27G2846' => 'fan', 'FAN27G3524' => 'fan', 'FvH4_2g11770' => 'fve', 'FvH4_2g15630' => 'fve', 'FvH4_3g05570' => 'fve', 'FvH4_3g09110' => 'fve', 'FvH4_3g19940' => 'fve', 'FvH4_4g04821' => 'fve', 'FvH4_4g31480' => 'fve', 'FvH4_7g01740' => 'fve', 'Glyma.05G130400' => 'gma', 'Glyma.05G156400' => 'gma', 'Glyma.07G197000' => 'gma', 'Glyma.08G085151' => 'gma', 'Glyma.08G114500' => 'gma', 'Glyma.08G300400' => 'gma', 'Glyma.10G215800' => 'gma', 'Glyma.12G224400' => 'gma', 'Glyma.13G179300' => 'gma', 'Glyma.13G218151' => 'gma', 'Glyma.13G238800' => 'gma', 'Glyma.13G276900' => 'gma', 'Glyma.14G078200' => 'gma', 'Glyma.15G074500' => 'gma', 'Glyma.15G094100' => 'gma', 'Glyma.17G247200' => 'gma', 'Glyma.18G120100' => 'gma', 'Glyma.20G176000' => 'gma', 'Gohir.A01G063600' => 'ghi', 'Gohir.A01G170301' => 'ghi', 'Gohir.A02G060500' => 'ghi', 'Gohir.A05G133850' => 'ghi', 'Gohir.A05G161400' => 'ghi', 'Gohir.A06G012900' => 'ghi', 'Gohir.A06G035901' => 'ghi', 'Gohir.A06G127100' => 'ghi', 'Gohir.A06G210500' => 'ghi', 'Gohir.A08G008650' => 'ghi', 'Gohir.A09G072700' => 'ghi', 'Gohir.A09G088301' => 'ghi', 'Gohir.A10G040600' => 'ghi', 'Gohir.A12G036300' => 'ghi', 'Gohir.A12G143350' => 'ghi', 'Gohir.A12G165500' => 'ghi', 'Gohir.A13G145700' => 'ghi', 'Gohir.D01G050000' => 'ghi', 'Gohir.D01G051366' => 'ghi', 'Gohir.D01G161350' => 'ghi', 'Gohir.D02G065900' => 'ghi', 'Gohir.D05G164200' => 'ghi', 'Gohir.D05G355500' => 'ghi', 'Gohir.D06G010400' => 'ghi', 'Gohir.D06G111250' => 'ghi', 'Gohir.D06G132000' => 'ghi', 'Gohir.D06G210500' => 'ghi', 'Gohir.D07G165675' => 'ghi', 'Gohir.D08G062240' => 'ghi', 'Gohir.D08G086101' => 'ghi', 'Gohir.D08G138060' => 'ghi', 'Gohir.D09G072300' => 'ghi', 'Gohir.D10G041400' => 'ghi', 'Gohir.D11G191020' => 'ghi', 'Gohir.D11G212066' => 'ghi', 'Gohir.D12G036300' => 'ghi', 'Gohir.D12G168600' => 'ghi', 'Gohir.D13G150600' => 'ghi', 'Gorai.001G057300' => 'gra', 'Gorai.002G069900' => 'gra', 'Gorai.002G200000' => 'gra', 'Gorai.003G067600' => 'gra', 'Gorai.005G074800' => 'gra', 'Gorai.006G087300' => 'gra', 'Gorai.008G037500' => 'gra', 'Gorai.008G181400' => 'gra', 'Gorai.009G169400' => 'gra', 'Gorai.009G387900' => 'gra', 'Gorai.010G013300' => 'gra', 'Gorai.010G153800' => 'gra', 'Gorai.010G255800' => 'gra', 'Gorai.011G043700' => 'gra', 'Gorai.011G198900' => 'gra', 'Gorai.013G168400' => 'gra', 'GSVIVG01005212001' => 'vvi', 'GSVIVG01006163001' => 'vvi', 'GSVIVG01009625001' => 'vvi', 'GSVIVG01014338001' => 'vvi', 'GSVIVG01020005001' => 'vvi', 'GSVIVG01021450001' => 'vvi', 'GSVIVG01023975001' => 'vvi', 'GSVIVG01034490001' => 'vvi', 'HanXRQChr04g0112071' => 'han', 'HanXRQChr05g0131151' => 'han', 'HanXRQChr09g0262371' => 'han', 'HanXRQChr09g0268401' => 'han', 'HanXRQChr10g0279241' => 'han', 'HanXRQChr10g0297961' => 'han', 'HanXRQChr11g0326231' => 'han', 'HanXRQChr11g0328471' => 'han', 'HanXRQChr16g0507941' => 'han', 'HanXRQChr17g0560211' => 'han', 'Haze_02108' => 'cav', 'Haze_02428' => 'cav', 'Haze_05593' => 'cav', 'Haze_06448' => 'cav', 'Haze_09427' => 'cav', 'Haze_12022' => 'cav', 'Haze_17612' => 'cav', 'Haze_17928' => 'cav', 'Hma1.2p1_0032F.1_g019250' => 'hma', 'Hma1.2p1_0163F.1_g072690' => 'hma', 'Hma1.2p1_0265F.1_g106710' => 'hma', 'Hma1.2p1_0286F.1_g113970' => 'hma', 'Hma1.2p1_0363F.1_g136640' => 'hma', 'Hma1.2p1_0584F.1_g183470' => 'hma', 'Hma1.2p1_0885F.1_g232570' => 'hma', 'HPP92_006022' => 'vpl', 'HPP92_007320' => 'vpl', 'HPP92_011521' => 'vpl', 'HPP92_019387' => 'vpl', 'HPP92_024038' => 'vpl', 'Hund05891' => 'sun', 'Hund06450' => 'sun', 'Hund12053' => 'sun', 'Hund16800' => 'sun', 'Hund21222' => 'sun', 'Hund22896' => 'sun', 'Hund23746' => 'sun', 'Hund27083' => 'sun', 'Lalb_Chr02g0141831' => 'lal', 'Lalb_Chr02g0141841' => 'lal', 'Lalb_Chr05g0220411' => 'lal', 'Lalb_Chr06g0162081' => 'lal', 'Lalb_Chr09g0327651' => 'lal', 'Lalb_Chr13g0295051' => 'lal', 'Lalb_Chr15g0086801' => 'lal', 'Lalb_Chr16g0383781' => 'lal', 'Lalb_Chr16g0383791' => 'lal', 'Lalb_Chr18g0055441' => 'lal', 'Lalb_Chr18g0059611' => 'lal', 'Lalb_Chr20g0109661' => 'lal', 'Lalb_Chr20g0109831' => 'lal', 'Lalb_Chr20g0121871' => 'lal', 'Lalb_Chr22g0355361' => 'lal', 'Lalb_Chr25g0286371' => 'lal', 'Lj1A1187G43' => 'lonja', 'Lj1A1205T50' => 'lonja', 'Lj1A800G33' => 'lonja', 'Lj1C1187T7' => 'lonja', 'Lj1C843T11' => 'lonja', 'Lj1g0010940' => 'lja', 'Lj2A288T69' => 'lonja', 'Lj3g0024276' => 'lja', 'Lj4A47T76' => 'lonja', 'Lj4g0005805' => 'lja', 'Lj4g0006097' => 'lja', 'Lj4g0008528' => 'lja', 'Lj4g0024907' => 'lja', 'Lj5g0012472' => 'lja', 'Lj5g0018648' => 'lja', 'Lj6C789G1' => 'lonja', 'Lj6g0004000' => 'lja', 'Lj7A292G67' => 'lonja', 'Lj7A292T64' => 'lonja', 'Lj9A400T58' => 'lonja', 'Lsat_1_v5_gn_1_126181' => 'lsa', 'Lsat_1_v5_gn_4_123041' => 'lsa', 'Lsat_1_v5_gn_4_133620' => 'lsa', 'Lsat_1_v5_gn_4_53221' => 'lsa', 'Lsat_1_v5_gn_4_71961' => 'lsa', 'Lsat_1_v5_gn_7_105241' => 'lsa', 'Lsat_1_v5_gn_7_21361' => 'lsa', 'Lsat_1_v5_gn_7_28860' => 'lsa', 'Lsat_1_v5_gn_7_31260' => 'lsa', 'Lsat_1_v5_gn_8_52801' => 'lsa', 'Manes.02G191400' => 'mes', 'Manes.03G110100' => 'mes', 'Manes.04G071100' => 'mes', 'Manes.05G100500' => 'mes', 'Manes.05G164700' => 'mes', 'Manes.15G087000' => 'mes', 'Manes.15G121500' => 'mes', 'Manes.16G028300' => 'mes', 'Manes.17G046100' => 'mes', 'Manes.17G069800' => 'mes', 'Manes.18G100500' => 'mes', 'Mapoly0002s0109' => 'mpo', 'Mapoly0024s0007' => 'mpo', 'Mapoly0089s0032' => 'mpo', 'MBI04_g42241_MAGBIO' => 'mbi', 'MBI05_g11988_MAGBIO' => 'mbi', 'MBI05_g35452_MAGBIO' => 'mbi', 'MBI07_g30179_MAGBIO' => 'mbi', 'MBI07_g35859_MAGBIO' => 'mbi', 'MBI07_g35860_MAGBIO' => 'mbi', 'MBI07_g37166_MAGBIO' => 'mbi', 'MBI08_g18172_MAGBIO' => 'mbi', 'MBI09_g08441_MAGBIO' => 'mbi', 'MBI13_g01676_MAGBIO' => 'mbi', 'MBI14_g42955_MAGBIO' => 'mbi', 'MBI16_g13161_MAGBIO' => 'mbi', 'MBI17_g27204_MAGBIO' => 'mbi', 'MBI19_g21595_MAGBIO' => 'mbi', 'MD00G1148400' => 'mdo', 'MD02G1301200' => 'mdo', 'MD03G1227800' => 'mdo', 'MD05G1041100' => 'mdo', 'MD05G1124800' => 'mdo', 'MD05G1284000' => 'mdo', 'MD05G1338800' => 'mdo', 'MD05G1338900' => 'mdo', 'MD07G1022800' => 'mdo', 'MD10G1047500' => 'mdo', 'MD10G1127500' => 'mdo', 'MD10G1262300' => 'mdo', 'MD10G1293800' => 'mdo', 'MD16G1074300' => 'mdo', 'Medtr1g021670' => 'mtr', 'Medtr1g096320' => 'mtr', 'Medtr2g013690' => 'mtr', 'Medtr2g019450' => 'mtr', 'Medtr2g085170' => 'mtr', 'Medtr4g088785' => 'mtr', 'Medtr8g055930' => 'mtr', 'Medtr8g085850' => 'mtr', 'MELO3C002605.2' => 'cme', 'MELO3C003891.2' => 'cme', 'MELO3C004012.2' => 'cme', 'MELO3C007134.2' => 'cme', 'MELO3C008118.2' => 'cme', 'MELO3C016700.2' => 'cme', 'MELO3C024127.2' => 'cme', 'MELO3C033361.2' => 'cme', 'MELO3C033362.2' => 'cme', 'Migut.C00430' => 'egut', 'Migut.C01246' => 'egut', 'Migut.E00101' => 'egut', 'Migut.H01486' => 'egut', 'Migut.H01939' => 'egut', 'Migut.K00360' => 'egut', 'Migut.M00910' => 'egut', 'Migut.M01139' => 'egut', 'Migut.N02677' => 'egut', 'MSTRG.13252' => 'ama', 'MSTRG.14701' => 'ama', 'MSTRG.1521' => 'ama', 'MSTRG.15884' => 'ama', 'MSTRG.16242' => 'ama', 'MSTRG.22285' => 'ama', 'MSTRG.22444' => 'ama', 'MSTRG.2349' => 'ama', 'MSTRG.26308' => 'ama', 'MSTRG.28296' => 'ama', 'MSTRG.9895' => 'ama', 'Nitab4.5_0000110g0060' => 'nta', 'Nitab4.5_0000420g0130' => 'nta', 'Nitab4.5_0000422g0030' => 'nta', 'Nitab4.5_0000560g0180' => 'nta', 'Nitab4.5_0000703g0100' => 'nta', 'Nitab4.5_0000786g0200' => 'nta', 'Nitab4.5_0001336g0020' => 'nta', 'Nitab4.5_0001796g0030' => 'nta', 'Nitab4.5_0003348g0060' => 'nta', 'Nitab4.5_0003698g0040' => 'nta', 'Nitab4.5_0003942g0090' => 'nta', 'Nitab4.5_0004775g0070' => 'nta', 'Nitab4.5_0004864g0030' => 'nta', 'Nitab4.5_0005615g0020' => 'nta', 'Nitab4.5_0009288g0030' => 'nta', 'Nitab4.5_0009341g0010' => 'nta', 'Nitab4.5_0009535g0010' => 'nta', 'Nn1g03995' => 'nnu', 'Nn1g04100' => 'nnu', 'Nn1g06530' => 'nnu', 'Nn3g16404' => 'nnu', 'Nn3g17212' => 'nnu', 'Nn3g20776' => 'nnu', 'Nn3g21923' => 'nnu', 'Nn5g27737' => 'nnu', 'Nn5g29461' => 'nnu', 'Nn7g38355' => 'nnu', 'Nn8g39873' => 'nnu', 'Oeu000548.2' => 'oeu', 'Oeu004672.1' => 'oeu', 'Oeu015605.2' => 'oeu', 'Oeu016092.1' => 'oeu', 'Oeu017879.3' => 'oeu', 'Oeu024910.1' => 'oeu', 'Oeu028965.1' => 'oeu', 'Oeu031269.1' => 'oeu', 'Oeu031270.1' => 'oeu', 'Oeu032535.1' => 'oeu', 'Oeu034151.1' => 'oeu', 'Oeu034152.1' => 'oeu', 'Oeu034588.2' => 'oeu', 'Oeu050846.1' => 'oeu', 'Oeu050849.2' => 'oeu', 'Oeu051063.2' => 'oeu', 'Oeu052368.1' => 'oeu', 'Oeu052370.1' => 'oeu', 'Os01g0210400' => 'osa', 'Os01g0304300' => 'osa', 'Os01g0749100' => 'osa', 'Os02g0745800' => 'osa', 'Os03g0769050' => 'osa', 'Os05g0531500' => 'osa', 'Os06g0724300' => 'osa', 'Os11g0198100' => 'osa', 'Peaxi162Scf00069g01425' => 'pax', 'Peaxi162Scf00280g00811' => 'pax', 'Peaxi162Scf00310g00615' => 'pax', 'Peaxi162Scf00362g00542' => 'pax', 'Peaxi162Scf00461g00310' => 'pax', 'Peaxi162Scf00530g00118' => 'pax', 'Peaxi162Scf00541g00057' => 'pax', 'Peaxi162Scf00661g00017' => 'pax', 'Peaxi162Scf00926g00027' => 'pax', 'Peaxi162Scf01064g00263' => 'pax', 'Peaxi162Scf01211g00135' => 'pax', 'PGR004G2336' => 'pgr', 'PGR042G0327' => 'pgr', 'PGR042G1957' => 'pgr', 'PGR042G2003' => 'pgr', 'PGR042G3929' => 'pgr', 'PGR083G1137' => 'pgr', 'PGR083G1364' => 'pgr', 'PGSC0003DMG400003381' => 'stu', 'PGSC0003DMG400003417' => 'stu', 'PGSC0003DMG400008981' => 'stu', 'PGSC0003DMG400012417' => 'stu', 'PGSC0003DMG400012823' => 'stu', 'PGSC0003DMG400016885' => 'stu', 'PGSC0003DMG400022812' => 'stu', 'PGSC0003DMG400029726' => 'stu', 'PGSC0003DMG401009243' => 'stu', 'PGSC0003DMG401031505' => 'stu', 'PGSC0003DMG402031505' => 'stu', 'Phvul.001G017600' => 'pvu', 'Phvul.002G193500' => 'pvu', 'Phvul.002G228900' => 'pvu', 'Phvul.002G236800' => 'pvu', 'Phvul.003G049500' => 'pvu', 'Phvul.005G072000' => 'pvu', 'Phvul.006G164800' => 'pvu', 'Phvul.006G185100' => 'pvu', 'Phvul.007G090000' => 'pvu', 'Potri.001G399800' => 'ptr', 'Potri.002G149900' => 'ptr', 'Potri.004G044100' => 'ptr', 'Potri.004G177600' => 'ptr', 'Potri.009G138000' => 'ptr', 'Potri.010G094000' => 'ptr', 'Potri.011G053000' => 'ptr', 'Potri.011G119300' => 'ptr', 'Potri.013G113700' => 'ptr', 'Potri.018G107800' => 'ptr', 'Potri.019G084100' => 'ptr', 'Pp3c14_23720' => 'ppa', 'Pp3c16_6340' => 'ppa', 'Pp3c23_13420' => 'ppa', 'Pp3c24_2740' => 'ppa', 'Pp3c25_860' => 'ppa', 'Pp3c8_21750' => 'ppa', 'Prupe.1G273000' => 'ppe', 'Prupe.1G273700' => 'ppe', 'Prupe.1G274100' => 'ppe', 'Prupe.2G023300' => 'ppe', 'Prupe.4G048000' => 'ppe', 'Prupe.4G080400' => 'ppe', 'Prupe.4G181200' => 'ppe', 'Prupe.8G056900' => 'ppe', 'Prupe.8G168700' => 'ppe', 'Psat1g189080' => 'psa', 'Psat1g204760' => 'psa', 'Psat4g175560' => 'psa', 'Psat4g177720' => 'psa', 'Psat5g244240' => 'psa', 'Psat6g010720' => 'psa', 'Psat6g187200' => 'psa', 'Psat7g072040' => 'psa', 'PSO017G3501' => 'pso', 'PSO063G2148' => 'pso', 'PSO063G5608' => 'pso', 'PSO210G6392' => 'pso', 'PSO541G2319' => 'pso', 'PSO541G2836' => 'pso', 'PSO541G4012' => 'pso', 'PSO541G6253' => 'pso', 'PSO675G0580' => 'pso', 'PSO675G0856' => 'pso', 'PSO675G5635' => 'pso', 'PSO675G9157' => 'pso', 'PSO832G1660' => 'pso', 'PSO832G1969' => 'pso', 'QL02p007186' => 'qlo', 'QL02p033904' => 'qlo', 'QL03p064391' => 'qlo', 'QL05p040593' => 'qlo', 'QL05p058242' => 'qlo', 'QL08p021825' => 'qlo', 'QL11p004981' => 'qlo', 'RcHm_v2.0_Chr1g0318301' => 'rch', 'RcHm_v2.0_Chr4g0418501' => 'rch', 'RcHm_v2.0_Chr4g0439971' => 'rch', 'RcHm_v2.0_Chr5g0008541' => 'rch', 'RcHm_v2.0_Chr5g0014101' => 'rch', 'RcHm_v2.0_Chr5g0014131' => 'rch', 'RcHm_v2.0_Chr5g0033621' => 'rch', 'RcHm_v2.0_Chr6g0272041' => 'rch', 'RcHm_v2.0_Chr6g0278831' => 'rch', 'Rhsim02G0130400' => 'rsi', 'Rhsim02G0171100' => 'rsi', 'Rhsim05G0053000' => 'rsi', 'Rhsim05G0053100' => 'rsi', 'Rhsim06G0096500' => 'rsi', 'Rhsim06G0096600' => 'rsi', 'Rhsim06G0199100' => 'rsi', 'Rhsim12G0062300' => 'rsi', 'Rhsim12G0062800' => 'rsi', 'Sabra02G0118600' => 'sbr', 'Sabra04G0027300' => 'sbr', 'Sabra04G0119500' => 'sbr', 'Sabra08G0112500' => 'sbr', 'Sabra11G0036800' => 'sbr', 'Sabra11G0103800' => 'sbr', 'Sabra13G0096300' => 'sbr', 'Sabra16G0262300' => 'sbr', 'Sabra18G0091700' => 'sbr', 'Sabra19G0095400' => 'sbr', 'SalBow6G3080' => 'sbo', 'SalBow7G1157' => 'sbo', 'SalBow7G2123' => 'sbo', 'SalBow7G2285' => 'sbo', 'SalBow7G3537' => 'sbo', 'SalBow8G2947' => 'sbo', 'SalBow8G4463' => 'sbo', 'SalBow8G5466' => 'sbo', 'Sc01g0001750' => 'sci', 'Sc02g0006640' => 'sci', 'Sc02g0006670' => 'sci', 'Sc04g0008220' => 'sci', 'Sc05g0006190' => 'sci', 'Sc08g0002760' => 'sci', 'Sc17g0006170' => 'sci', 'Sc22g0002050' => 'sci', 'Sc23g0001190' => 'sci', 'Sc24g0000980' => 'sci', 'Sed0006245' => 'sed', 'Sed0007543' => 'sed', 'Sed0009411' => 'sed', 'Sed0010765' => 'sed', 'Sed0012944' => 'sed', 'Sed0014682' => 'sed', 'Sed0016174' => 'sed', 'Sed0016796' => 'sed', 'Sed0020317' => 'sed', 'Sed0021467' => 'sed', 'SEGI_01316' => 'sgi', 'SEGI_03374' => 'sgi', 'SEGI_16265' => 'sgi', 'SEGI_18569' => 'sgi', 'SEGI_20351' => 'sgi', 'SEGI_26395' => 'sgi', 'SEGI_29469' => 'sgi', 'SEGI_34771' => 'sgi', 'SEGI_36769' => 'sgi', 'SEGI_37139' => 'sgi', 'SGA_v2.0_scaffold100G29687' => 'sas', 'SGA_v2.0_scaffold118G32472' => 'sas', 'SGA_v2.0_scaffold14G07051' => 'sas', 'SGA_v2.0_scaffold183G39845' => 'sas', 'SGA_v2.0_scaffold1G00174' => 'sas', 'SGA_v2.0_scaffold22G09714' => 'sas', 'SGA_v2.0_scaffold333G48992' => 'sas', 'SGA_v2.0_scaffold46G17491' => 'sas', 'SGA_v2.0_scaffold49G18294' => 'sas', 'SGA_v2.0_scaffold63G21658' => 'sas', 'SHI01741' => 'shi', 'SHI05771' => 'shi', 'SHI18077' => 'shi', 'SHI20525' => 'shi', 'SHI20527' => 'shi', 'SHI20528' => 'shi', 'SMO172G0185' => 'smo', 'SMO198G0020' => 'smo', 'SMO351G0006' => 'smo', 'SMO356G0118' => 'smo', 'SMO358G0296' => 'smo', 'SMO367G0079' => 'smo', 'SMO367G1277' => 'smo', 'Solyc01g014220.3' => 'sly', 'Solyc01g111770.2' => 'sly', 'Solyc02g078180.3' => 'sly', 'Solyc03g006430.3' => 'sly', 'Solyc03g006456.1' => 'sly', 'Solyc03g079860.2' => 'sly', 'Solyc04g079770.3' => 'sly', 'Solyc05g007430.4' => 'sly', 'Solyc07g063150.3' => 'sly', 'Solyc08g016620.3' => 'sly', 'Solyc09g057590.3' => 'sly', 'Solyc09g057600.1' => 'sly', 'Solyc10g009050.3' => 'sly', 'Solyc11g017420.2' => 'sly', 'Sopen01g053810' => 'spe', 'Sopen02g023040' => 'spe', 'Sopen03g002440' => 'spe', 'Sopen04g033350' => 'spe', 'Sopen05g003310' => 'spe', 'Sopen07g004050' => 'spe', 'Sopen07g031340' => 'spe', 'Sopen08g006990' => 'spe', 'Sopen10g004830' => 'spe', 'Sopen11g009370' => 'spe', 'Sp1g24450' => 'spa', 'Sp1g29670' => 'spa', 'Sp1g39600' => 'spa', 'Sp2g11080' => 'spa', 'Sp2g13970' => 'spa', 'Sp4g16130' => 'spa', 'Sp6g13080' => 'spa', 'Sp7g37270' => 'spa', 'TAR371G0065' => 'tar', 'TAR376G0340' => 'tar', 'TAR376G0435' => 'tar', 'TAR381G0002' => 'tar', 'TAR381G1236' => 'tar', 'TAR624G0055' => 'tar', 'TAR624G0324' => 'tar', 'TAR624G0696' => 'tar', 'TAR624G0906' => 'tar', 'TAR625G0107' => 'tar', 'TAR626G0015' => 'tar', 'TAR626G1356' => 'tar', 'TAR627G0888' => 'tar', 'TAR628G0399' => 'tar', 'TAR628G1327' => 'tar', 'TAR629G2831' => 'tar', 'TAR629G2874' => 'tar', 'TAR633G1432' => 'tar', 'TAR633G2771' => 'tar', 'THA.LOC104803394' => 'tha', 'THA.LOC104805153' => 'tha', 'THA.LOC104806784' => 'tha', 'THA.LOC104810473' => 'tha', 'THA.LOC104813100' => 'tha', 'THA.LOC104814215' => 'tha', 'THA.LOC104815554' => 'tha', 'THA.LOC104820544' => 'tha', 'THA.LOC104824754' => 'tha', 'THA.LOC104827717' => 'tha', 'Thecc.02G031400' => 'tca', 'Thecc.02G055900' => 'tca', 'Thecc.02G350800' => 'tca', 'Thecc.06G150900' => 'tca', 'Thecc.06G186600' => 'tca', 'Thecc.07G089600' => 'tca', 'Thecc.08G020400' => 'tca', 'Thecc.08G182100' => 'tca', 'Thhalv10000873m.g' => 'esa', 'Thhalv10004185m.g' => 'esa', 'Thhalv10006981m.g' => 'esa', 'Thhalv10007204m.g' => 'esa', 'Thhalv10011374m.g' => 'esa', 'Thhalv10013482m.g' => 'esa', 'Thhalv10017801m.g' => 'esa', 'Thhalv10024983m.g' => 'esa', 'TPR.G12072' => 'tpr', 'TPR.G15769' => 'tpr', 'TPR.G16504' => 'tpr', 'TPR.G16506' => 'tpr', 'TPR.G24345' => 'tpr', 'TPR.G26666' => 'tpr', 'TPR.G27320' => 'tpr', 'TPR.G31819' => 'tpr', 'TPR.G38879' => 'tpr', 'TPR.G39015' => 'tpr', 'TPR.G8819' => 'tpr', 'TWI09G0924' => 'twi', 'TWI12G0811' => 'twi', 'TWI12G1294' => 'twi', 'TWI31G0150' => 'twi', 'TWI36G1262' => 'twi', 'TWI38G1287' => 'twi', 'TWI38G1633' => 'twi', 'TWI38G1982' => 'twi', 'TWI39G0116' => 'twi', 'TWI60G1011' => 'twi', 'TWI63G0171' => 'twi', 'TWI73G0839' => 'twi', 'TWI79G1511' => 'twi', 'unitig_0.g915' => 'ugi', 'unitig_0.g916' => 'ugi', 'unitig_21.g20219' => 'ugi', 'unitig_21.g20416' => 'ugi', 'unitig_578.g16132' => 'ugi', 'unitig_578.g16718' => 'ugi', 'unitig_62.g23481' => 'ugi', 'unitig_744.g24535' => 'ugi', 'unitig_749.g13525' => 'ugi', 'vmacro01248' => 'vma', 'vmacro02290' => 'vma', 'vmacro10946' => 'vma', 'vmacro11865' => 'vma', 'vmacro12493' => 'vma', 'vmacro17322' => 'vma', 'vmacro21599' => 'vma', 'vmacro23041' => 'vma', 'VMungo0251G0004' => 'vmu', 'VMungo0251G2639' => 'vmu', 'VMungo0251G2967' => 'vmu', 'VMungo0540G0864' => 'vmu', 'VMungo0540G1569' => 'vmu', 'VMungo0647G0317' => 'vmu', 'VMungo0720G1373' => 'vmu', 'VMungo0720G1508' => 'vmu', 'VMungo1080G0485' => 'vmu', 'VMungo1215G3177' => 'vmu', 'Zm00001eb112600' => 'zma', 'Zm00001eb120220' => 'zma', 'Zm00001eb153240' => 'zma', 'Zm00001eb168880' => 'zma', 'Zm00001eb213920' => 'zma', 'Zm00001eb228280' => 'zma', 'Zm00001eb254580' => 'zma', 'Zm00001eb272180' => 'zma', 'Zm00001eb293190' => 'zma', 'Zm00001eb322930' => 'zma', 'Zm00001eb353360' => 'zma', 'Zm00001eb353390' => 'zma', 'Zm00001eb353430' => 'zma', 'Zm00001eb353440' => 'zma', 'Zm00001eb353780' => 'zma' ), 'gf_id' => 'HOM05D000499', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000499' ), 'data_identifier' => 'HOM05D000499', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000499', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1066', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p29780' => 'bna', 'A02p33180' => 'bna', 'A03p16470' => 'bna', 'A03p66010' => 'bna', 'A04p25970' => 'bna', 'A06p01270' => 'bna', 'A06p46080' => 'bna', 'A07p11400' => 'bna', 'A08p01840' => 'bna', 'A08p08230' => 'bna', 'A08p25740' => 'bna', 'A09p32070' => 'bna', 'A09p37830' => 'bna', 'A09p42840' => 'bna', 'A09p42850' => 'bna', 'Aa31LG10G2060' => 'aar', 'Aa31LG2G7410' => 'aar', 'Aa31LG6G10200' => 'aar', 'Aa31LG6G16680' => 'aar', 'Aa31LG6G8470' => 'aar', 'Aa31LG9G12730' => 'aar', 'Aa31LG9G13680' => 'aar', 'Aa31LG9G14920' => 'aar', 'Aa31LG9G6650' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4977' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5467' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3254' => 'aag', 'Actinidia02578' => 'ach', 'Actinidia07693' => 'ach', 'Actinidia08413' => 'ach', 'Actinidia08414' => 'ach', 'Actinidia15289' => 'ach', 'Actinidia19871' => 'ach', 'Actinidia21475' => 'ach', 'Actinidia22576' => 'ach', 'Actinidia28327' => 'ach', 'Actinidia32491' => 'ach', 'Actinidia39463' => 'ach', 'Actinidia39571' => 'ach', 'Ah.01g013750' => 'amhyb', 'Ah.01g023210' => 'amhyb', 'Ah.04g164850' => 'amhyb', 'Ah.05g178060' => 'amhyb', 'Ah.07g204270' => 'amhyb', 'Ah.07g208480' => 'amhyb', 'Ah.09g237410' => 'amhyb', 'Ah.14g089460' => 'amhyb', 'AL1G41790' => 'aly', 'AL1G49050' => 'aly', 'AL1G53810' => 'aly', 'AL1G61400' => 'aly', 'AL4G18580' => 'aly', 'AL5G12510' => 'aly', 'AL5G12540' => 'aly', 'AL6G43230' => 'aly', 'AL7G10370' => 'aly', 'AL7G19250' => 'aly', 'AL8G12240' => 'aly', 'AL8G18540' => 'aly', 'Aqoxy1G02409' => 'aox', 'Aqoxy2G03993' => 'aox', 'Aqoxy3G03357' => 'aox', 'Aqoxy4G00785' => 'aox', 'Aqoxy5G02598' => 'aox', 'Aqoxy6G00132' => 'aox', 'Aqoxy7G01776' => 'aox', 'Aqoxy7G02316' => 'aox', 'Aqoxy7G03973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.12AFKW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B8730' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27IQR1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3F75VG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3RE0GA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41TCQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.527VTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FIR39' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5W8UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DA38EV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ63HS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H1I32C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HC27T5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4M8AP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7N3CZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9UVDZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LS1NQA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT1D4B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SKC4TM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCFV76' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF9Q1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQWD9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1ZM88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WE07RT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YCK7VH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJE6Q6' => 'arhy', 'AT1G28240' => 'ath', 'AT1G34550' => 'ath', 'AT1G53040' => 'ath', 'AT2G02910' => 'ath', 'AT4G09630' => 'ath', 'AT4G38500' => 'ath', 'AT5G42660' => 'ath', 'AT5G46220' => 'ath', 'ATR0152G026' => 'atr', 'ATR0564G343' => 'atr', 'ATR0706G151' => 'atr', 'ATR0733G207' => 'atr', 'ATR0751G234' => 'atr', 'ATR0807G048' => 'atr', 'ATR1091G084' => 'atr', 'Atru.chr10.1229' => 'acertr', 'Atru.chr10.1230' => 'acertr', 'Atru.chr10.1874' => 'acertr', 'Atru.chr11.1808' => 'acertr', 'Atru.chr13.1795' => 'acertr', 'Atru.chr13.570' => 'acertr', 'Atru.chr2.2608' => 'acertr', 'Atru.chr2.2609' => 'acertr', 'Atru.chr5.3428' => 'acertr', 'Atru.chr8.1171' => 'acertr', 'AUR62004651' => 'cqu', 'AUR62008675' => 'cqu', 'AUR62010014' => 'cqu', 'AUR62013004' => 'cqu', 'AUR62014825' => 'cqu', 'AUR62015015' => 'cqu', 'AUR62015151' => 'cqu', 'AUR62017020' => 'cqu', 'AUR62019422' => 'cqu', 'AUR62023570' => 'cqu', 'AUR62025571' => 'cqu', 'AUR62029098' => 'cqu', 'AUR62033863' => 'cqu', 'AUR62034296' => 'cqu', 'AUR62040075' => 'cqu', 'BcaB02g07334' => 'bca', 'BcaB02g10575' => 'bca', 'BcaB03g12119' => 'bca', 'BcaB03g12120' => 'bca', 'BcaB03g13945' => 'bca', 'BcaB04g17123' => 'bca', 'BcaB04g17867' => 'bca', 'BcaB04g19839' => 'bca', 'BcaB07g30317' => 'bca', 'BcaB07g32432' => 'bca', 'BcaB07g33362' => 'bca', 'BcaB08g36611' => 'bca', 'BcaC01g00028' => 'bca', 'BcaC01g01356' => 'bca', 'BcaC01g02034' => 'bca', 'BcaC01g06051' => 'bca', 'BcaC03g16839' => 'bca', 'BcaC03g17176' => 'bca', 'BcaC05g26829' => 'bca', 'BcaC06g31490' => 'bca', 'BcaC06g35344' => 'bca', 'BcaC06g36570' => 'bca', 'BcaC07g37537' => 'bca', 'BcaC08g43491' => 'bca', 'BcaC08g43773' => 'bca', 'BcaNung00234' => 'bca', 'BcaNung01982' => 'bca', 'BcaNung03707' => 'bca', 'BcaNung06454' => 'bca', 'BolC2t10762H' => 'bol', 'BolC2t11191H' => 'bol', 'BolC3t14322H' => 'bol', 'BolC3t19747H' => 'bol', 'BolC3t21425H' => 'bol', 'BolC4t27800H' => 'bol', 'BolC5t31423H' => 'bol', 'BolC6t35951H' => 'bol', 'BolC6t36282H' => 'bol', 'BolC7t40678H' => 'bol', 'BolC7t40679H' => 'bol', 'BolC7t42222H' => 'bol', 'BolC7t43492H' => 'bol', 'BolC7t46785H' => 'bol', 'BolC8t47853H' => 'bol', 'BolC9t56805H' => 'bol', 'BraA02t08000Z' => 'bra', 'BraA02t08341Z' => 'bra', 'BraA03t10936Z' => 'bra', 'BraA03t15657Z' => 'bra', 'BraA04t18100Z' => 'bra', 'BraA05t20523Z' => 'bra', 'BraA06t23353Z' => 'bra', 'BraA06t27473Z' => 'bra', 'BraA06t27769Z' => 'bra', 'BraA07t28928Z' => 'bra', 'BraA08t32236Z' => 'bra', 'BraA08t32841Z' => 'bra', 'BraA08t34524Z' => 'bra', 'BraA09t38742Z' => 'bra', 'BraA09t39295Z' => 'bra', 'C02p47180' => 'bna', 'C02p50990' => 'bna', 'C03p19360' => 'bna', 'C03p74950' => 'bna', 'C03p91000' => 'bna', 'C04p63260' => 'bna', 'C05p27050' => 'bna', 'C06p08750' => 'bna', 'C06p11490' => 'bna', 'C07p02820' => 'bna', 'C07p17180' => 'bna', 'C07p29440' => 'bna', 'C07p63730' => 'bna', 'C09p39260' => 'bna', 'CAN.G1164.34' => 'can', 'CAN.G1164.39' => 'can', 'CAN.G1530.3' => 'can', 'CAN.G162.61' => 'can', 'CAN.G176.6' => 'can', 'CAN.G289.49' => 'can', 'CAN.G370.21' => 'can', 'CAN.G370.22' => 'can', 'CAN.G371.117' => 'can', 'CAN.G58.37' => 'can', 'CAN.G588.98' => 'can', 'CANSAT21G2266' => 'cansat', 'CANSAT25G2799' => 'cansat', 'CANSAT35G0862' => 'cansat', 'CANSAT35G1704' => 'cansat', 'CANSAT35G1760' => 'cansat', 'CANSAT56G3971' => 'cansat', 'CANSAT56G4116' => 'cansat', 'CANSAT80G1259' => 'cansat', 'CARHR027730' => 'chi', 'CARHR033880' => 'chi', 'CARHR043270' => 'chi', 'CARHR145330' => 'chi', 'CARHR145340' => 'chi', 'CARHR175570' => 'chi', 'CARHR181570' => 'chi', 'CARHR258470' => 'chi', 'CARHR260490' => 'chi', 'CARHR294220' => 'chi', 'Carub.0001s2668' => 'cru', 'Carub.0001s3257' => 'cru', 'Carub.0001s4220' => 'cru', 'Carub.0005s0179' => 'cru', 'Carub.0006s2807' => 'cru', 'Carub.0007s0039' => 'cru', 'Carub.0008s0169' => 'cru', 'Carub.0008s0636' => 'cru', 'Ca_00338_v3' => 'car', 'Ca_00542_v3' => 'car', 'Ca_01844_v3' => 'car', 'Ca_10611_v3' => 'car', 'Ca_13326_v3' => 'car', 'Ca_17944_v3' => 'car', 'Ca_18546_v3' => 'car', 'Ca_24219_v3' => 'car', 'Ca_29972_v3' => 'car', 'CBR_g3681' => 'cbr', 'CBR_g40021' => 'cbr', 'Cc01_g08140' => 'ccan', 'Cc02_g13410' => 'ccan', 'Cc02_g37480' => 'ccan', 'Cc05_g12030' => 'ccan', 'Cc09_g03370' => 'ccan', 'Cc09_g10300' => 'ccan', 'Cc10_g03530' => 'ccan', 'Cc10_g11380' => 'ccan', 'CDE01G0176' => 'cde', 'CDE02G0675' => 'cde', 'CDE02G0942' => 'cde', 'CDE02G1153' => 'cde', 'CDE02G4177' => 'cde', 'CDE04G2117' => 'cde', 'CDE04G2736' => 'cde', 'CDE08G1161' => 'cde', 'CDE09G1238' => 'cde', 'Cfa000467' => 'cfa', 'Cfa000947' => 'cfa', 'Cfa004969' => 'cfa', 'Cfa005284' => 'cfa', 'Cfa008993' => 'cfa', 'Cfa018187' => 'cfa', 'Cfa018454' => 'cfa', 'Cfa020585' => 'cfa', 'Ciclev10000424m.g' => 'ccl', 'Ciclev10003605m.g' => 'ccl', 'Ciclev10007828m.g' => 'ccl', 'Ciclev10014620m.g' => 'ccl', 'Ciclev10015169m.g' => 'ccl', 'Ciclev10018291m.g' => 'ccl', 'Ciclev10028256m.g' => 'ccl', 'Ciclev10033822m.g' => 'ccl', 'CiPaw.05G060300' => 'cil', 'CiPaw.05G085000' => 'cil', 'CiPaw.06G083700' => 'cil', 'CiPaw.06G120300' => 'cil', 'CiPaw.09G060500' => 'cil', 'CiPaw.09G123800' => 'cil', 'CiPaw.11G169700' => 'cil', 'CiPaw.12G118300' => 'cil', 'CiPaw.15G071000' => 'cil', 'CiPaw.15G081900' => 'cil', 'ClCG01G024610' => 'cla', 'ClCG03G006070' => 'cla', 'ClCG05G019250' => 'cla', 'ClCG09G009500' => 'cla', 'ClCG11G008200' => 'cla', 'ClCG11G018080' => 'cla', 'COL.COLO4_17373' => 'col', 'COL.COLO4_22994' => 'col', 'COL.COLO4_26389' => 'col', 'COL.COLO4_27170' => 'col', 'COL.COLO4_31074' => 'col', 'COL.COLO4_31465' => 'col', 'COL.COLO4_36438' => 'col', 'COL.COLO4_36439' => 'col', 'Cpa.g.c38781' => 'cpa', 'Cpa.g.sc128.12' => 'cpa', 'Cpa.g.sc166.7' => 'cpa', 'Cpa.g.sc166.8' => 'cpa', 'Cpa.g.sc20.111' => 'cpa', 'Cpa.g.sc27.31' => 'cpa', 'Cpa.g.sc64.36' => 'cpa', 'Cpa.g.sc64.37' => 'cpa', 'Cpa.g.sc66.49' => 'cpa', 'Cpa.g.sc80.64' => 'cpa', 'CsaV3_1G012320' => 'csa', 'CsaV3_2G008480' => 'csa', 'CsaV3_2G033450' => 'csa', 'CsaV3_3G044830' => 'csa', 'CsaV3_4G033710' => 'csa', 'CsaV3_6G051730' => 'csa', 'CsaV3_7G025350' => 'csa', 'CSS0001067' => 'camsi', 'CSS0005996' => 'camsi', 'CSS0006590' => 'camsi', 'CSS0009673' => 'camsi', 'CSS0010201' => 'camsi', 'CSS0010549' => 'camsi', 'CSS0011364' => 'camsi', 'CSS0014473' => 'camsi', 'CSS0014961' => 'camsi', 'CSS0020191' => 'camsi', 'CSS0021165' => 'camsi', 'CSS0022306' => 'camsi', 'CSS0030591' => 'camsi', 'CSS0030696' => 'camsi', 'CSS0032653' => 'camsi', 'CSS0037487' => 'camsi', 'CSS0041102' => 'camsi', 'CSS0041261' => 'camsi', 'CSS0046246' => 'camsi', 'CSS0049256' => 'camsi', 'DCAR_004075' => 'dca', 'DCAR_011538' => 'dca', 'DCAR_019553' => 'dca', 'DCAR_020952' => 'dca', 'DCAR_021739' => 'dca', 'DCAR_027407' => 'dca', 'DCAR_027913' => 'dca', 'DCAR_028066' => 'dca', 'Dinv05899' => 'din', 'Dinv07563' => 'din', 'Dinv08010' => 'din', 'Dinv14125' => 'din', 'Dinv20172' => 'din', 'Dinv30743' => 'din', 'Dinv31229' => 'din', 'Dinv34162' => 'din', 'Dinv36028' => 'din', 'Dinv39368' => 'din', 'Dinv40565' => 'din', 'Dinv41706' => 'din', 'Duzib052G0089' => 'dzi', 'Duzib116G0641' => 'dzi', 'Duzib132G0069' => 'dzi', 'Duzib132G1219' => 'dzi', 'Duzib147G0278' => 'dzi', 'Duzib160G0480' => 'dzi', 'Duzib170G0661' => 'dzi', 'Duzib177G0591' => 'dzi', 'Duzib187G1353' => 'dzi', 'Duzib192G0858' => 'dzi', 'Duzib192G0883' => 'dzi', 'Duzib213G0506' => 'dzi', 'Duzib235G0289' => 'dzi', 'Duzib251G0422' => 'dzi', 'ECA232G3898' => 'eca', 'ECA233G5950' => 'eca', 'ECA234G1699' => 'eca', 'ECA234G2421' => 'eca', 'ECA236G0426' => 'eca', 'ECA236G4331' => 'eca', 'ECA248G2573' => 'eca', 'EL10Ac1g00077' => 'bvu', 'EL10Ac1g01746' => 'bvu', 'EL10Ac2g03464' => 'bvu', 'EL10Ac4g08176' => 'bvu', 'EL10Ac7g17521' => 'bvu', 'EL10Ac8g20386' => 'bvu', 'EL10Ac9g21343' => 'bvu', 'EL10Ac9g22688' => 'bvu', 'Eucgr.B03434' => 'egr', 'Eucgr.D00618' => 'egr', 'Eucgr.E02395' => 'egr', 'Eucgr.F01129' => 'egr', 'Eucgr.F02622' => 'egr', 'Eucgr.F04207' => 'egr', 'FAN01G0570' => 'fan', 'FAN03G3351' => 'fan', 'FAN06G3702' => 'fan', 'FAN07G2149' => 'fan', 'FAN10G3758' => 'fan', 'FAN11G1170' => 'fan', 'FAN11G2050' => 'fan', 'FAN11G2724' => 'fan', 'FAN12G1700' => 'fan', 'FAN12G2028' => 'fan', 'FAN15G1160' => 'fan', 'FAN15G3063' => 'fan', 'FAN16G2540' => 'fan', 'FAN16G3077' => 'fan', 'FAN16G3624' => 'fan', 'FAN17G0221' => 'fan', 'FAN20G2492' => 'fan', 'FAN20G2905' => 'fan', 'FAN21G0548' => 'fan', 'FAN21G1300' => 'fan', 'FAN22G0077' => 'fan', 'FAN22G1315' => 'fan', 'FAN24G1280' => 'fan', 'FAN24G1445' => 'fan', 'FAN24G3527' => 'fan', 'FAN25G0464' => 'fan', 'FAN25G2885' => 'fan', 'FAN25G3270' => 'fan', 'FAN27G1101' => 'fan', 'FAN27G2846' => 'fan', 'FAN27G3524' => 'fan', 'FvH4_2g11770' => 'fve', 'FvH4_2g15630' => 'fve', 'FvH4_3g05570' => 'fve', 'FvH4_3g09110' => 'fve', 'FvH4_3g19940' => 'fve', 'FvH4_4g04821' => 'fve', 'FvH4_4g31480' => 'fve', 'FvH4_7g01740' => 'fve', 'Glyma.05G130400' => 'gma', 'Glyma.05G156400' => 'gma', 'Glyma.07G197000' => 'gma', 'Glyma.08G085151' => 'gma', 'Glyma.08G114500' => 'gma', 'Glyma.08G300400' => 'gma', 'Glyma.10G215800' => 'gma', 'Glyma.12G224400' => 'gma', 'Glyma.13G179300' => 'gma', 'Glyma.13G218151' => 'gma', 'Glyma.13G238800' => 'gma', 'Glyma.13G276900' => 'gma', 'Glyma.14G078200' => 'gma', 'Glyma.15G074500' => 'gma', 'Glyma.15G094100' => 'gma', 'Glyma.17G247200' => 'gma', 'Glyma.18G120100' => 'gma', 'Glyma.20G176000' => 'gma', 'Gohir.A01G063600' => 'ghi', 'Gohir.A01G170301' => 'ghi', 'Gohir.A02G060500' => 'ghi', 'Gohir.A05G133850' => 'ghi', 'Gohir.A05G161400' => 'ghi', 'Gohir.A06G012900' => 'ghi', 'Gohir.A06G035901' => 'ghi', 'Gohir.A06G127100' => 'ghi', 'Gohir.A06G210500' => 'ghi', 'Gohir.A08G008650' => 'ghi', 'Gohir.A09G072700' => 'ghi', 'Gohir.A09G088301' => 'ghi', 'Gohir.A10G040600' => 'ghi', 'Gohir.A12G036300' => 'ghi', 'Gohir.A12G143350' => 'ghi', 'Gohir.A12G165500' => 'ghi', 'Gohir.A13G145700' => 'ghi', 'Gohir.D01G050000' => 'ghi', 'Gohir.D01G051366' => 'ghi', 'Gohir.D01G161350' => 'ghi', 'Gohir.D02G065900' => 'ghi', 'Gohir.D05G164200' => 'ghi', 'Gohir.D05G355500' => 'ghi', 'Gohir.D06G010400' => 'ghi', 'Gohir.D06G111250' => 'ghi', 'Gohir.D06G132000' => 'ghi', 'Gohir.D06G210500' => 'ghi', 'Gohir.D07G165675' => 'ghi', 'Gohir.D08G062240' => 'ghi', 'Gohir.D08G086101' => 'ghi', 'Gohir.D08G138060' => 'ghi', 'Gohir.D09G072300' => 'ghi', 'Gohir.D10G041400' => 'ghi', 'Gohir.D11G191020' => 'ghi', 'Gohir.D11G212066' => 'ghi', 'Gohir.D12G036300' => 'ghi', 'Gohir.D12G168600' => 'ghi', 'Gohir.D13G150600' => 'ghi', 'Gorai.001G057300' => 'gra', 'Gorai.002G069900' => 'gra', 'Gorai.002G200000' => 'gra', 'Gorai.003G067600' => 'gra', 'Gorai.005G074800' => 'gra', 'Gorai.006G087300' => 'gra', 'Gorai.008G037500' => 'gra', 'Gorai.008G181400' => 'gra', 'Gorai.009G169400' => 'gra', 'Gorai.009G387900' => 'gra', 'Gorai.010G013300' => 'gra', 'Gorai.010G153800' => 'gra', 'Gorai.010G255800' => 'gra', 'Gorai.011G043700' => 'gra', 'Gorai.011G198900' => 'gra', 'Gorai.013G168400' => 'gra', 'GSVIVG01005212001' => 'vvi', 'GSVIVG01006163001' => 'vvi', 'GSVIVG01009625001' => 'vvi', 'GSVIVG01014338001' => 'vvi', 'GSVIVG01020005001' => 'vvi', 'GSVIVG01021450001' => 'vvi', 'GSVIVG01023975001' => 'vvi', 'GSVIVG01034490001' => 'vvi', 'HanXRQChr04g0112071' => 'han', 'HanXRQChr05g0131151' => 'han', 'HanXRQChr09g0262371' => 'han', 'HanXRQChr09g0268401' => 'han', 'HanXRQChr10g0279241' => 'han', 'HanXRQChr10g0297961' => 'han', 'HanXRQChr11g0326231' => 'han', 'HanXRQChr11g0328471' => 'han', 'HanXRQChr16g0507941' => 'han', 'HanXRQChr17g0560211' => 'han', 'Haze_02108' => 'cav', 'Haze_02428' => 'cav', 'Haze_05593' => 'cav', 'Haze_06448' => 'cav', 'Haze_09427' => 'cav', 'Haze_12022' => 'cav', 'Haze_17612' => 'cav', 'Haze_17928' => 'cav', 'Hma1.2p1_0032F.1_g019250' => 'hma', 'Hma1.2p1_0163F.1_g072690' => 'hma', 'Hma1.2p1_0265F.1_g106710' => 'hma', 'Hma1.2p1_0286F.1_g113970' => 'hma', 'Hma1.2p1_0363F.1_g136640' => 'hma', 'Hma1.2p1_0584F.1_g183470' => 'hma', 'Hma1.2p1_0885F.1_g232570' => 'hma', 'HPP92_006022' => 'vpl', 'HPP92_007320' => 'vpl', 'HPP92_011521' => 'vpl', 'HPP92_019387' => 'vpl', 'HPP92_024038' => 'vpl', 'Hund05891' => 'sun', 'Hund06450' => 'sun', 'Hund12053' => 'sun', 'Hund16800' => 'sun', 'Hund21222' => 'sun', 'Hund22896' => 'sun', 'Hund23746' => 'sun', 'Hund27083' => 'sun', 'Lalb_Chr02g0141831' => 'lal', 'Lalb_Chr02g0141841' => 'lal', 'Lalb_Chr05g0220411' => 'lal', 'Lalb_Chr06g0162081' => 'lal', 'Lalb_Chr09g0327651' => 'lal', 'Lalb_Chr13g0295051' => 'lal', 'Lalb_Chr15g0086801' => 'lal', 'Lalb_Chr16g0383781' => 'lal', 'Lalb_Chr16g0383791' => 'lal', 'Lalb_Chr18g0055441' => 'lal', 'Lalb_Chr18g0059611' => 'lal', 'Lalb_Chr20g0109661' => 'lal', 'Lalb_Chr20g0109831' => 'lal', 'Lalb_Chr20g0121871' => 'lal', 'Lalb_Chr22g0355361' => 'lal', 'Lalb_Chr25g0286371' => 'lal', 'Lj1A1187G43' => 'lonja', 'Lj1A1205T50' => 'lonja', 'Lj1A800G33' => 'lonja', 'Lj1C1187T7' => 'lonja', 'Lj1C843T11' => 'lonja', 'Lj1g0010940' => 'lja', 'Lj2A288T69' => 'lonja', 'Lj3g0024276' => 'lja', 'Lj4A47T76' => 'lonja', 'Lj4g0005805' => 'lja', 'Lj4g0006097' => 'lja', 'Lj4g0008528' => 'lja', 'Lj4g0024907' => 'lja', 'Lj5g0012472' => 'lja', 'Lj5g0018648' => 'lja', 'Lj6C789G1' => 'lonja', 'Lj6g0004000' => 'lja', 'Lj7A292G67' => 'lonja', 'Lj7A292T64' => 'lonja', 'Lj9A400T58' => 'lonja', 'Lsat_1_v5_gn_1_126181' => 'lsa', 'Lsat_1_v5_gn_4_123041' => 'lsa', 'Lsat_1_v5_gn_4_133620' => 'lsa', 'Lsat_1_v5_gn_4_53221' => 'lsa', 'Lsat_1_v5_gn_4_71961' => 'lsa', 'Lsat_1_v5_gn_7_105241' => 'lsa', 'Lsat_1_v5_gn_7_21361' => 'lsa', 'Lsat_1_v5_gn_7_28860' => 'lsa', 'Lsat_1_v5_gn_7_31260' => 'lsa', 'Lsat_1_v5_gn_8_52801' => 'lsa', 'Manes.02G191400' => 'mes', 'Manes.03G110100' => 'mes', 'Manes.04G071100' => 'mes', 'Manes.05G100500' => 'mes', 'Manes.05G164700' => 'mes', 'Manes.15G087000' => 'mes', 'Manes.15G121500' => 'mes', 'Manes.16G028300' => 'mes', 'Manes.17G046100' => 'mes', 'Manes.17G069800' => 'mes', 'Manes.18G100500' => 'mes', 'Mapoly0002s0109' => 'mpo', 'Mapoly0024s0007' => 'mpo', 'Mapoly0089s0032' => 'mpo', 'MBI04_g42241_MAGBIO' => 'mbi', 'MBI05_g11988_MAGBIO' => 'mbi', 'MBI05_g35452_MAGBIO' => 'mbi', 'MBI07_g30179_MAGBIO' => 'mbi', 'MBI07_g35859_MAGBIO' => 'mbi', 'MBI07_g35860_MAGBIO' => 'mbi', 'MBI07_g37166_MAGBIO' => 'mbi', 'MBI08_g18172_MAGBIO' => 'mbi', 'MBI09_g08441_MAGBIO' => 'mbi', 'MBI13_g01676_MAGBIO' => 'mbi', 'MBI14_g42955_MAGBIO' => 'mbi', 'MBI16_g13161_MAGBIO' => 'mbi', 'MBI17_g27204_MAGBIO' => 'mbi', 'MBI19_g21595_MAGBIO' => 'mbi', 'MD00G1148400' => 'mdo', 'MD02G1301200' => 'mdo', 'MD03G1227800' => 'mdo', 'MD05G1041100' => 'mdo', 'MD05G1124800' => 'mdo', 'MD05G1284000' => 'mdo', 'MD05G1338800' => 'mdo', 'MD05G1338900' => 'mdo', 'MD07G1022800' => 'mdo', 'MD10G1047500' => 'mdo', 'MD10G1127500' => 'mdo', 'MD10G1262300' => 'mdo', 'MD10G1293800' => 'mdo', 'MD16G1074300' => 'mdo', 'Medtr1g021670' => 'mtr', 'Medtr1g096320' => 'mtr', 'Medtr2g013690' => 'mtr', 'Medtr2g019450' => 'mtr', 'Medtr2g085170' => 'mtr', 'Medtr4g088785' => 'mtr', 'Medtr8g055930' => 'mtr', 'Medtr8g085850' => 'mtr', 'MELO3C002605.2' => 'cme', 'MELO3C003891.2' => 'cme', 'MELO3C004012.2' => 'cme', 'MELO3C007134.2' => 'cme', 'MELO3C008118.2' => 'cme', 'MELO3C016700.2' => 'cme', 'MELO3C024127.2' => 'cme', 'MELO3C033361.2' => 'cme', 'MELO3C033362.2' => 'cme', 'Migut.C00430' => 'egut', 'Migut.C01246' => 'egut', 'Migut.E00101' => 'egut', 'Migut.H01486' => 'egut', 'Migut.H01939' => 'egut', 'Migut.K00360' => 'egut', 'Migut.M00910' => 'egut', 'Migut.M01139' => 'egut', 'Migut.N02677' => 'egut', 'MSTRG.13252' => 'ama', 'MSTRG.14701' => 'ama', 'MSTRG.1521' => 'ama', 'MSTRG.15884' => 'ama', 'MSTRG.16242' => 'ama', 'MSTRG.22285' => 'ama', 'MSTRG.22444' => 'ama', 'MSTRG.2349' => 'ama', 'MSTRG.26308' => 'ama', 'MSTRG.28296' => 'ama', 'MSTRG.9895' => 'ama', 'Nitab4.5_0000110g0060' => 'nta', 'Nitab4.5_0000420g0130' => 'nta', 'Nitab4.5_0000422g0030' => 'nta', 'Nitab4.5_0000560g0180' => 'nta', 'Nitab4.5_0000703g0100' => 'nta', 'Nitab4.5_0000786g0200' => 'nta', 'Nitab4.5_0001336g0020' => 'nta', 'Nitab4.5_0001796g0030' => 'nta', 'Nitab4.5_0003348g0060' => 'nta', 'Nitab4.5_0003698g0040' => 'nta', 'Nitab4.5_0003942g0090' => 'nta', 'Nitab4.5_0004775g0070' => 'nta', 'Nitab4.5_0004864g0030' => 'nta', 'Nitab4.5_0005615g0020' => 'nta', 'Nitab4.5_0009288g0030' => 'nta', 'Nitab4.5_0009341g0010' => 'nta', 'Nitab4.5_0009535g0010' => 'nta', 'Nn1g03995' => 'nnu', 'Nn1g04100' => 'nnu', 'Nn1g06530' => 'nnu', 'Nn3g16404' => 'nnu', 'Nn3g17212' => 'nnu', 'Nn3g20776' => 'nnu', 'Nn3g21923' => 'nnu', 'Nn5g27737' => 'nnu', 'Nn5g29461' => 'nnu', 'Nn7g38355' => 'nnu', 'Nn8g39873' => 'nnu', 'Oeu000548.2' => 'oeu', 'Oeu004672.1' => 'oeu', 'Oeu015605.2' => 'oeu', 'Oeu016092.1' => 'oeu', 'Oeu017879.3' => 'oeu', 'Oeu024910.1' => 'oeu', 'Oeu028965.1' => 'oeu', 'Oeu031269.1' => 'oeu', 'Oeu031270.1' => 'oeu', 'Oeu032535.1' => 'oeu', 'Oeu034151.1' => 'oeu', 'Oeu034152.1' => 'oeu', 'Oeu034588.2' => 'oeu', 'Oeu050846.1' => 'oeu', 'Oeu050849.2' => 'oeu', 'Oeu051063.2' => 'oeu', 'Oeu052368.1' => 'oeu', 'Oeu052370.1' => 'oeu', 'Os01g0210400' => 'osa', 'Os01g0304300' => 'osa', 'Os01g0749100' => 'osa', 'Os02g0745800' => 'osa', 'Os03g0769050' => 'osa', 'Os05g0531500' => 'osa', 'Os06g0724300' => 'osa', 'Os11g0198100' => 'osa', 'Peaxi162Scf00069g01425' => 'pax', 'Peaxi162Scf00280g00811' => 'pax', 'Peaxi162Scf00310g00615' => 'pax', 'Peaxi162Scf00362g00542' => 'pax', 'Peaxi162Scf00461g00310' => 'pax', 'Peaxi162Scf00530g00118' => 'pax', 'Peaxi162Scf00541g00057' => 'pax', 'Peaxi162Scf00661g00017' => 'pax', 'Peaxi162Scf00926g00027' => 'pax', 'Peaxi162Scf01064g00263' => 'pax', 'Peaxi162Scf01211g00135' => 'pax', 'PGR004G2336' => 'pgr', 'PGR042G0327' => 'pgr', 'PGR042G1957' => 'pgr', 'PGR042G2003' => 'pgr', 'PGR042G3929' => 'pgr', 'PGR083G1137' => 'pgr', 'PGR083G1364' => 'pgr', 'PGSC0003DMG400003381' => 'stu', 'PGSC0003DMG400003417' => 'stu', 'PGSC0003DMG400008981' => 'stu', 'PGSC0003DMG400012417' => 'stu', 'PGSC0003DMG400012823' => 'stu', 'PGSC0003DMG400016885' => 'stu', 'PGSC0003DMG400022812' => 'stu', 'PGSC0003DMG400029726' => 'stu', 'PGSC0003DMG401009243' => 'stu', 'PGSC0003DMG401031505' => 'stu', 'PGSC0003DMG402031505' => 'stu', 'Phvul.001G017600' => 'pvu', 'Phvul.002G193500' => 'pvu', 'Phvul.002G228900' => 'pvu', 'Phvul.002G236800' => 'pvu', 'Phvul.003G049500' => 'pvu', 'Phvul.005G072000' => 'pvu', 'Phvul.006G164800' => 'pvu', 'Phvul.006G185100' => 'pvu', 'Phvul.007G090000' => 'pvu', 'Potri.001G399800' => 'ptr', 'Potri.002G149900' => 'ptr', 'Potri.004G044100' => 'ptr', 'Potri.004G177600' => 'ptr', 'Potri.009G138000' => 'ptr', 'Potri.010G094000' => 'ptr', 'Potri.011G053000' => 'ptr', 'Potri.011G119300' => 'ptr', 'Potri.013G113700' => 'ptr', 'Potri.018G107800' => 'ptr', 'Potri.019G084100' => 'ptr', 'Pp3c14_23720' => 'ppa', 'Pp3c16_6340' => 'ppa', 'Pp3c23_13420' => 'ppa', 'Pp3c24_2740' => 'ppa', 'Pp3c25_860' => 'ppa', 'Pp3c8_21750' => 'ppa', 'Prupe.1G273000' => 'ppe', 'Prupe.1G273700' => 'ppe', 'Prupe.1G274100' => 'ppe', 'Prupe.2G023300' => 'ppe', 'Prupe.4G048000' => 'ppe', 'Prupe.4G080400' => 'ppe', 'Prupe.4G181200' => 'ppe', 'Prupe.8G056900' => 'ppe', 'Prupe.8G168700' => 'ppe', 'Psat1g189080' => 'psa', 'Psat1g204760' => 'psa', 'Psat4g175560' => 'psa', 'Psat4g177720' => 'psa', 'Psat5g244240' => 'psa', 'Psat6g010720' => 'psa', 'Psat6g187200' => 'psa', 'Psat7g072040' => 'psa', 'PSO017G3501' => 'pso', 'PSO063G2148' => 'pso', 'PSO063G5608' => 'pso', 'PSO210G6392' => 'pso', 'PSO541G2319' => 'pso', 'PSO541G2836' => 'pso', 'PSO541G4012' => 'pso', 'PSO541G6253' => 'pso', 'PSO675G0580' => 'pso', 'PSO675G0856' => 'pso', 'PSO675G5635' => 'pso', 'PSO675G9157' => 'pso', 'PSO832G1660' => 'pso', 'PSO832G1969' => 'pso', 'QL02p007186' => 'qlo', 'QL02p033904' => 'qlo', 'QL03p064391' => 'qlo', 'QL05p040593' => 'qlo', 'QL05p058242' => 'qlo', 'QL08p021825' => 'qlo', 'QL11p004981' => 'qlo', 'RcHm_v2.0_Chr1g0318301' => 'rch', 'RcHm_v2.0_Chr4g0418501' => 'rch', 'RcHm_v2.0_Chr4g0439971' => 'rch', 'RcHm_v2.0_Chr5g0008541' => 'rch', 'RcHm_v2.0_Chr5g0014101' => 'rch', 'RcHm_v2.0_Chr5g0014131' => 'rch', 'RcHm_v2.0_Chr5g0033621' => 'rch', 'RcHm_v2.0_Chr6g0272041' => 'rch', 'RcHm_v2.0_Chr6g0278831' => 'rch', 'Rhsim02G0130400' => 'rsi', 'Rhsim02G0171100' => 'rsi', 'Rhsim05G0053000' => 'rsi', 'Rhsim05G0053100' => 'rsi', 'Rhsim06G0096500' => 'rsi', 'Rhsim06G0096600' => 'rsi', 'Rhsim06G0199100' => 'rsi', 'Rhsim12G0062300' => 'rsi', 'Rhsim12G0062800' => 'rsi', 'Sabra02G0118600' => 'sbr', 'Sabra04G0027300' => 'sbr', 'Sabra04G0119500' => 'sbr', 'Sabra08G0112500' => 'sbr', 'Sabra11G0036800' => 'sbr', 'Sabra11G0103800' => 'sbr', 'Sabra13G0096300' => 'sbr', 'Sabra16G0262300' => 'sbr', 'Sabra18G0091700' => 'sbr', 'Sabra19G0095400' => 'sbr', 'SalBow6G3080' => 'sbo', 'SalBow7G1157' => 'sbo', 'SalBow7G2123' => 'sbo', 'SalBow7G2285' => 'sbo', 'SalBow7G3537' => 'sbo', 'SalBow8G2947' => 'sbo', 'SalBow8G4463' => 'sbo', 'SalBow8G5466' => 'sbo', 'Sc01g0001750' => 'sci', 'Sc02g0006640' => 'sci', 'Sc02g0006670' => 'sci', 'Sc04g0008220' => 'sci', 'Sc05g0006190' => 'sci', 'Sc08g0002760' => 'sci', 'Sc17g0006170' => 'sci', 'Sc22g0002050' => 'sci', 'Sc23g0001190' => 'sci', 'Sc24g0000980' => 'sci', 'Sed0006245' => 'sed', 'Sed0007543' => 'sed', 'Sed0009411' => 'sed', 'Sed0010765' => 'sed', 'Sed0012944' => 'sed', 'Sed0014682' => 'sed', 'Sed0016174' => 'sed', 'Sed0016796' => 'sed', 'Sed0020317' => 'sed', 'Sed0021467' => 'sed', 'SEGI_01316' => 'sgi', 'SEGI_03374' => 'sgi', 'SEGI_16265' => 'sgi', 'SEGI_18569' => 'sgi', 'SEGI_20351' => 'sgi', 'SEGI_26395' => 'sgi', 'SEGI_29469' => 'sgi', 'SEGI_34771' => 'sgi', 'SEGI_36769' => 'sgi', 'SEGI_37139' => 'sgi', 'SGA_v2.0_scaffold100G29687' => 'sas', 'SGA_v2.0_scaffold118G32472' => 'sas', 'SGA_v2.0_scaffold14G07051' => 'sas', 'SGA_v2.0_scaffold183G39845' => 'sas', 'SGA_v2.0_scaffold1G00174' => 'sas', 'SGA_v2.0_scaffold22G09714' => 'sas', 'SGA_v2.0_scaffold333G48992' => 'sas', 'SGA_v2.0_scaffold46G17491' => 'sas', 'SGA_v2.0_scaffold49G18294' => 'sas', 'SGA_v2.0_scaffold63G21658' => 'sas', 'SHI01741' => 'shi', 'SHI05771' => 'shi', 'SHI18077' => 'shi', 'SHI20525' => 'shi', 'SHI20527' => 'shi', 'SHI20528' => 'shi', 'SMO172G0185' => 'smo', 'SMO198G0020' => 'smo', 'SMO351G0006' => 'smo', 'SMO356G0118' => 'smo', 'SMO358G0296' => 'smo', 'SMO367G0079' => 'smo', 'SMO367G1277' => 'smo', 'Solyc01g014220.3' => 'sly', 'Solyc01g111770.2' => 'sly', 'Solyc02g078180.3' => 'sly', 'Solyc03g006430.3' => 'sly', 'Solyc03g006456.1' => 'sly', 'Solyc03g079860.2' => 'sly', 'Solyc04g079770.3' => 'sly', 'Solyc05g007430.4' => 'sly', 'Solyc07g063150.3' => 'sly', 'Solyc08g016620.3' => 'sly', 'Solyc09g057590.3' => 'sly', 'Solyc09g057600.1' => 'sly', 'Solyc10g009050.3' => 'sly', 'Solyc11g017420.2' => 'sly', 'Sopen01g053810' => 'spe', 'Sopen02g023040' => 'spe', 'Sopen03g002440' => 'spe', 'Sopen04g033350' => 'spe', 'Sopen05g003310' => 'spe', 'Sopen07g004050' => 'spe', 'Sopen07g031340' => 'spe', 'Sopen08g006990' => 'spe', 'Sopen10g004830' => 'spe', 'Sopen11g009370' => 'spe', 'Sp1g24450' => 'spa', 'Sp1g29670' => 'spa', 'Sp1g39600' => 'spa', 'Sp2g11080' => 'spa', 'Sp2g13970' => 'spa', 'Sp4g16130' => 'spa', 'Sp6g13080' => 'spa', 'Sp7g37270' => 'spa', 'TAR371G0065' => 'tar', 'TAR376G0340' => 'tar', 'TAR376G0435' => 'tar', 'TAR381G0002' => 'tar', 'TAR381G1236' => 'tar', 'TAR624G0055' => 'tar', 'TAR624G0324' => 'tar', 'TAR624G0696' => 'tar', 'TAR624G0906' => 'tar', 'TAR625G0107' => 'tar', 'TAR626G0015' => 'tar', 'TAR626G1356' => 'tar', 'TAR627G0888' => 'tar', 'TAR628G0399' => 'tar', 'TAR628G1327' => 'tar', 'TAR629G2831' => 'tar', 'TAR629G2874' => 'tar', 'TAR633G1432' => 'tar', 'TAR633G2771' => 'tar', 'THA.LOC104803394' => 'tha', 'THA.LOC104805153' => 'tha', 'THA.LOC104806784' => 'tha', 'THA.LOC104810473' => 'tha', 'THA.LOC104813100' => 'tha', 'THA.LOC104814215' => 'tha', 'THA.LOC104815554' => 'tha', 'THA.LOC104820544' => 'tha', 'THA.LOC104824754' => 'tha', 'THA.LOC104827717' => 'tha', 'Thecc.02G031400' => 'tca', 'Thecc.02G055900' => 'tca', 'Thecc.02G350800' => 'tca', 'Thecc.06G150900' => 'tca', 'Thecc.06G186600' => 'tca', 'Thecc.07G089600' => 'tca', 'Thecc.08G020400' => 'tca', 'Thecc.08G182100' => 'tca', 'Thhalv10000873m.g' => 'esa', 'Thhalv10004185m.g' => 'esa', 'Thhalv10006981m.g' => 'esa', 'Thhalv10007204m.g' => 'esa', 'Thhalv10011374m.g' => 'esa', 'Thhalv10013482m.g' => 'esa', 'Thhalv10017801m.g' => 'esa', 'Thhalv10024983m.g' => 'esa', 'TPR.G12072' => 'tpr', 'TPR.G15769' => 'tpr', 'TPR.G16504' => 'tpr', 'TPR.G16506' => 'tpr', 'TPR.G24345' => 'tpr', 'TPR.G26666' => 'tpr', 'TPR.G27320' => 'tpr', 'TPR.G31819' => 'tpr', 'TPR.G38879' => 'tpr', 'TPR.G39015' => 'tpr', 'TPR.G8819' => 'tpr', 'TWI09G0924' => 'twi', 'TWI12G0811' => 'twi', 'TWI12G1294' => 'twi', 'TWI31G0150' => 'twi', 'TWI36G1262' => 'twi', 'TWI38G1287' => 'twi', 'TWI38G1633' => 'twi', 'TWI38G1982' => 'twi', 'TWI39G0116' => 'twi', 'TWI60G1011' => 'twi', 'TWI63G0171' => 'twi', 'TWI73G0839' => 'twi', 'TWI79G1511' => 'twi', 'unitig_0.g915' => 'ugi', 'unitig_0.g916' => 'ugi', 'unitig_21.g20219' => 'ugi', 'unitig_21.g20416' => 'ugi', 'unitig_578.g16132' => 'ugi', 'unitig_578.g16718' => 'ugi', 'unitig_62.g23481' => 'ugi', 'unitig_744.g24535' => 'ugi', 'unitig_749.g13525' => 'ugi', 'vmacro01248' => 'vma', 'vmacro02290' => 'vma', 'vmacro10946' => 'vma', 'vmacro11865' => 'vma', 'vmacro12493' => 'vma', 'vmacro17322' => 'vma', 'vmacro21599' => 'vma', 'vmacro23041' => 'vma', 'VMungo0251G0004' => 'vmu', 'VMungo0251G2639' => 'vmu', 'VMungo0251G2967' => 'vmu', 'VMungo0540G0864' => 'vmu', 'VMungo0540G1569' => 'vmu', 'VMungo0647G0317' => 'vmu', 'VMungo0720G1373' => 'vmu', 'VMungo0720G1508' => 'vmu', 'VMungo1080G0485' => 'vmu', 'VMungo1215G3177' => 'vmu', 'Zm00001eb112600' => 'zma', 'Zm00001eb120220' => 'zma', 'Zm00001eb153240' => 'zma', 'Zm00001eb168880' => 'zma', 'Zm00001eb213920' => 'zma', 'Zm00001eb228280' => 'zma', 'Zm00001eb254580' => 'zma', 'Zm00001eb272180' => 'zma', 'Zm00001eb293190' => 'zma', 'Zm00001eb322930' => 'zma', 'Zm00001eb353360' => 'zma', 'Zm00001eb353390' => 'zma', 'Zm00001eb353430' => 'zma', 'Zm00001eb353440' => 'zma', 'Zm00001eb353780' => 'zma' ) $gf_id = 'HOM05D000499' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000499' ) $data_identifier = 'HOM05D000499' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 29, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 12, 'amhyb' => (int) 8, 'aly' => (int) 12, 'aox' => (int) 9, 'arhy' => (int) 26, 'ath' => (int) 8, 'atr' => (int) 7, 'acertr' => (int) 10, 'cqu' => (int) 15, 'bca' => (int) 29, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 11, 'cansat' => (int) 8, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 9, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 8, 'cpa' => (int) 10, 'csa' => (int) 7, 'camsi' => (int) 20, 'dca' => (int) 8, 'din' => (int) 12, 'dzi' => (int) 14, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 6, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 38, 'gra' => (int) 16, 'vvi' => (int) 8, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 5, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 11, 'lja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 11, 'mpo' => (int) 3, 'mbi' => (int) 14, 'mdo' => (int) 14, 'mtr' => (int) 8, 'cme' => (int) 9, 'egut' => (int) 9, 'ama' => (int) 11, 'nta' => (int) 17, 'nnu' => (int) 11, 'oeu' => (int) 18, 'osa' => (int) 8, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 6, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 9, 'rsi' => (int) 9, 'sbr' => (int) 10, 'sbo' => (int) 8, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 10, 'sas' => (int) 10, 'shi' => (int) 6, 'smo' => (int) 7, 'sly' => (int) 14, 'spe' => (int) 10, 'spa' => (int) 8, 'tar' => (int) 19, 'tha' => (int) 10, 'tca' => (int) 8, 'esa' => (int) 8, 'tpr' => (int) 11, 'twi' => (int) 13, 'ugi' => (int) 9, 'vma' => (int) 8, 'vmu' => (int) 10, 'zma' => (int) 15 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb353780' $species_info = array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ) $local_species = 'rsi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000499', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1066', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p29780' => 'bna', 'A02p33180' => 'bna', 'A03p16470' => 'bna', 'A03p66010' => 'bna', 'A04p25970' => 'bna', 'A06p01270' => 'bna', 'A06p46080' => 'bna', 'A07p11400' => 'bna', 'A08p01840' => 'bna', 'A08p08230' => 'bna', 'A08p25740' => 'bna', 'A09p32070' => 'bna', 'A09p37830' => 'bna', 'A09p42840' => 'bna', 'A09p42850' => 'bna', 'Aa31LG10G2060' => 'aar', 'Aa31LG2G7410' => 'aar', 'Aa31LG6G10200' => 'aar', 'Aa31LG6G16680' => 'aar', 'Aa31LG6G8470' => 'aar', 'Aa31LG9G12730' => 'aar', 'Aa31LG9G13680' => 'aar', 'Aa31LG9G14920' => 'aar', 'Aa31LG9G6650' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4977' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5467' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3254' => 'aag', 'Actinidia02578' => 'ach', 'Actinidia07693' => 'ach', 'Actinidia08413' => 'ach', 'Actinidia08414' => 'ach', 'Actinidia15289' => 'ach', 'Actinidia19871' => 'ach', 'Actinidia21475' => 'ach', 'Actinidia22576' => 'ach', 'Actinidia28327' => 'ach', 'Actinidia32491' => 'ach', 'Actinidia39463' => 'ach', 'Actinidia39571' => 'ach', 'Ah.01g013750' => 'amhyb', 'Ah.01g023210' => 'amhyb', 'Ah.04g164850' => 'amhyb', 'Ah.05g178060' => 'amhyb', 'Ah.07g204270' => 'amhyb', 'Ah.07g208480' => 'amhyb', 'Ah.09g237410' => 'amhyb', 'Ah.14g089460' => 'amhyb', 'AL1G41790' => 'aly', 'AL1G49050' => 'aly', 'AL1G53810' => 'aly', 'AL1G61400' => 'aly', 'AL4G18580' => 'aly', 'AL5G12510' => 'aly', 'AL5G12540' => 'aly', 'AL6G43230' => 'aly', 'AL7G10370' => 'aly', 'AL7G19250' => 'aly', 'AL8G12240' => 'aly', 'AL8G18540' => 'aly', 'Aqoxy1G02409' => 'aox', 'Aqoxy2G03993' => 'aox', 'Aqoxy3G03357' => 'aox', 'Aqoxy4G00785' => 'aox', 'Aqoxy5G02598' => 'aox', 'Aqoxy6G00132' => 'aox', 'Aqoxy7G01776' => 'aox', 'Aqoxy7G02316' => 'aox', 'Aqoxy7G03973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.12AFKW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B8730' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27IQR1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3F75VG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3RE0GA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41TCQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.527VTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FIR39' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5W8UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DA38EV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ63HS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H1I32C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HC27T5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4M8AP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7N3CZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9UVDZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LS1NQA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT1D4B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SKC4TM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCFV76' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF9Q1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQWD9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1ZM88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WE07RT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YCK7VH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJE6Q6' => 'arhy', 'AT1G28240' => 'ath', 'AT1G34550' => 'ath', 'AT1G53040' => 'ath', 'AT2G02910' => 'ath', 'AT4G09630' => 'ath', 'AT4G38500' => 'ath', 'AT5G42660' => 'ath', 'AT5G46220' => 'ath', 'ATR0152G026' => 'atr', 'ATR0564G343' => 'atr', 'ATR0706G151' => 'atr', 'ATR0733G207' => 'atr', 'ATR0751G234' => 'atr', 'ATR0807G048' => 'atr', 'ATR1091G084' => 'atr', 'Atru.chr10.1229' => 'acertr', 'Atru.chr10.1230' => 'acertr', 'Atru.chr10.1874' => 'acertr', 'Atru.chr11.1808' => 'acertr', 'Atru.chr13.1795' => 'acertr', 'Atru.chr13.570' => 'acertr', 'Atru.chr2.2608' => 'acertr', 'Atru.chr2.2609' => 'acertr', 'Atru.chr5.3428' => 'acertr', 'Atru.chr8.1171' => 'acertr', 'AUR62004651' => 'cqu', 'AUR62008675' => 'cqu', 'AUR62010014' => 'cqu', 'AUR62013004' => 'cqu', 'AUR62014825' => 'cqu', 'AUR62015015' => 'cqu', 'AUR62015151' => 'cqu', 'AUR62017020' => 'cqu', 'AUR62019422' => 'cqu', 'AUR62023570' => 'cqu', 'AUR62025571' => 'cqu', 'AUR62029098' => 'cqu', 'AUR62033863' => 'cqu', 'AUR62034296' => 'cqu', 'AUR62040075' => 'cqu', 'BcaB02g07334' => 'bca', 'BcaB02g10575' => 'bca', 'BcaB03g12119' => 'bca', 'BcaB03g12120' => 'bca', 'BcaB03g13945' => 'bca', 'BcaB04g17123' => 'bca', 'BcaB04g17867' => 'bca', 'BcaB04g19839' => 'bca', 'BcaB07g30317' => 'bca', 'BcaB07g32432' => 'bca', 'BcaB07g33362' => 'bca', 'BcaB08g36611' => 'bca', 'BcaC01g00028' => 'bca', 'BcaC01g01356' => 'bca', 'BcaC01g02034' => 'bca', 'BcaC01g06051' => 'bca', 'BcaC03g16839' => 'bca', 'BcaC03g17176' => 'bca', 'BcaC05g26829' => 'bca', 'BcaC06g31490' => 'bca', 'BcaC06g35344' => 'bca', 'BcaC06g36570' => 'bca', 'BcaC07g37537' => 'bca', 'BcaC08g43491' => 'bca', 'BcaC08g43773' => 'bca', 'BcaNung00234' => 'bca', 'BcaNung01982' => 'bca', 'BcaNung03707' => 'bca', 'BcaNung06454' => 'bca', 'BolC2t10762H' => 'bol', 'BolC2t11191H' => 'bol', 'BolC3t14322H' => 'bol', 'BolC3t19747H' => 'bol', 'BolC3t21425H' => 'bol', 'BolC4t27800H' => 'bol', 'BolC5t31423H' => 'bol', 'BolC6t35951H' => 'bol', 'BolC6t36282H' => 'bol', 'BolC7t40678H' => 'bol', 'BolC7t40679H' => 'bol', 'BolC7t42222H' => 'bol', 'BolC7t43492H' => 'bol', 'BolC7t46785H' => 'bol', 'BolC8t47853H' => 'bol', 'BolC9t56805H' => 'bol', 'BraA02t08000Z' => 'bra', 'BraA02t08341Z' => 'bra', 'BraA03t10936Z' => 'bra', 'BraA03t15657Z' => 'bra', 'BraA04t18100Z' => 'bra', 'BraA05t20523Z' => 'bra', 'BraA06t23353Z' => 'bra', 'BraA06t27473Z' => 'bra', 'BraA06t27769Z' => 'bra', 'BraA07t28928Z' => 'bra', 'BraA08t32236Z' => 'bra', 'BraA08t32841Z' => 'bra', 'BraA08t34524Z' => 'bra', 'BraA09t38742Z' => 'bra', 'BraA09t39295Z' => 'bra', 'C02p47180' => 'bna', 'C02p50990' => 'bna', 'C03p19360' => 'bna', 'C03p74950' => 'bna', 'C03p91000' => 'bna', 'C04p63260' => 'bna', 'C05p27050' => 'bna', 'C06p08750' => 'bna', 'C06p11490' => 'bna', 'C07p02820' => 'bna', 'C07p17180' => 'bna', 'C07p29440' => 'bna', 'C07p63730' => 'bna', 'C09p39260' => 'bna', 'CAN.G1164.34' => 'can', 'CAN.G1164.39' => 'can', 'CAN.G1530.3' => 'can', 'CAN.G162.61' => 'can', 'CAN.G176.6' => 'can', 'CAN.G289.49' => 'can', 'CAN.G370.21' => 'can', 'CAN.G370.22' => 'can', 'CAN.G371.117' => 'can', 'CAN.G58.37' => 'can', 'CAN.G588.98' => 'can', 'CANSAT21G2266' => 'cansat', 'CANSAT25G2799' => 'cansat', 'CANSAT35G0862' => 'cansat', 'CANSAT35G1704' => 'cansat', 'CANSAT35G1760' => 'cansat', 'CANSAT56G3971' => 'cansat', 'CANSAT56G4116' => 'cansat', 'CANSAT80G1259' => 'cansat', 'CARHR027730' => 'chi', 'CARHR033880' => 'chi', 'CARHR043270' => 'chi', 'CARHR145330' => 'chi', 'CARHR145340' => 'chi', 'CARHR175570' => 'chi', 'CARHR181570' => 'chi', 'CARHR258470' => 'chi', 'CARHR260490' => 'chi', 'CARHR294220' => 'chi', 'Carub.0001s2668' => 'cru', 'Carub.0001s3257' => 'cru', 'Carub.0001s4220' => 'cru', 'Carub.0005s0179' => 'cru', 'Carub.0006s2807' => 'cru', 'Carub.0007s0039' => 'cru', 'Carub.0008s0169' => 'cru', 'Carub.0008s0636' => 'cru', 'Ca_00338_v3' => 'car', 'Ca_00542_v3' => 'car', 'Ca_01844_v3' => 'car', 'Ca_10611_v3' => 'car', 'Ca_13326_v3' => 'car', 'Ca_17944_v3' => 'car', 'Ca_18546_v3' => 'car', 'Ca_24219_v3' => 'car', 'Ca_29972_v3' => 'car', 'CBR_g3681' => 'cbr', 'CBR_g40021' => 'cbr', 'Cc01_g08140' => 'ccan', 'Cc02_g13410' => 'ccan', 'Cc02_g37480' => 'ccan', 'Cc05_g12030' => 'ccan', 'Cc09_g03370' => 'ccan', 'Cc09_g10300' => 'ccan', 'Cc10_g03530' => 'ccan', 'Cc10_g11380' => 'ccan', 'CDE01G0176' => 'cde', 'CDE02G0675' => 'cde', 'CDE02G0942' => 'cde', 'CDE02G1153' => 'cde', 'CDE02G4177' => 'cde', 'CDE04G2117' => 'cde', 'CDE04G2736' => 'cde', 'CDE08G1161' => 'cde', 'CDE09G1238' => 'cde', 'Cfa000467' => 'cfa', 'Cfa000947' => 'cfa', 'Cfa004969' => 'cfa', 'Cfa005284' => 'cfa', 'Cfa008993' => 'cfa', 'Cfa018187' => 'cfa', 'Cfa018454' => 'cfa', 'Cfa020585' => 'cfa', 'Ciclev10000424m.g' => 'ccl', 'Ciclev10003605m.g' => 'ccl', 'Ciclev10007828m.g' => 'ccl', 'Ciclev10014620m.g' => 'ccl', 'Ciclev10015169m.g' => 'ccl', 'Ciclev10018291m.g' => 'ccl', 'Ciclev10028256m.g' => 'ccl', 'Ciclev10033822m.g' => 'ccl', 'CiPaw.05G060300' => 'cil', 'CiPaw.05G085000' => 'cil', 'CiPaw.06G083700' => 'cil', 'CiPaw.06G120300' => 'cil', 'CiPaw.09G060500' => 'cil', 'CiPaw.09G123800' => 'cil', 'CiPaw.11G169700' => 'cil', 'CiPaw.12G118300' => 'cil', 'CiPaw.15G071000' => 'cil', 'CiPaw.15G081900' => 'cil', 'ClCG01G024610' => 'cla', 'ClCG03G006070' => 'cla', 'ClCG05G019250' => 'cla', 'ClCG09G009500' => 'cla', 'ClCG11G008200' => 'cla', 'ClCG11G018080' => 'cla', 'COL.COLO4_17373' => 'col', 'COL.COLO4_22994' => 'col', 'COL.COLO4_26389' => 'col', 'COL.COLO4_27170' => 'col', 'COL.COLO4_31074' => 'col', 'COL.COLO4_31465' => 'col', 'COL.COLO4_36438' => 'col', 'COL.COLO4_36439' => 'col', 'Cpa.g.c38781' => 'cpa', 'Cpa.g.sc128.12' => 'cpa', 'Cpa.g.sc166.7' => 'cpa', 'Cpa.g.sc166.8' => 'cpa', 'Cpa.g.sc20.111' => 'cpa', 'Cpa.g.sc27.31' => 'cpa', 'Cpa.g.sc64.36' => 'cpa', 'Cpa.g.sc64.37' => 'cpa', 'Cpa.g.sc66.49' => 'cpa', 'Cpa.g.sc80.64' => 'cpa', 'CsaV3_1G012320' => 'csa', 'CsaV3_2G008480' => 'csa', 'CsaV3_2G033450' => 'csa', 'CsaV3_3G044830' => 'csa', 'CsaV3_4G033710' => 'csa', 'CsaV3_6G051730' => 'csa', 'CsaV3_7G025350' => 'csa', 'CSS0001067' => 'camsi', 'CSS0005996' => 'camsi', 'CSS0006590' => 'camsi', 'CSS0009673' => 'camsi', 'CSS0010201' => 'camsi', 'CSS0010549' => 'camsi', 'CSS0011364' => 'camsi', 'CSS0014473' => 'camsi', 'CSS0014961' => 'camsi', 'CSS0020191' => 'camsi', 'CSS0021165' => 'camsi', 'CSS0022306' => 'camsi', 'CSS0030591' => 'camsi', 'CSS0030696' => 'camsi', 'CSS0032653' => 'camsi', 'CSS0037487' => 'camsi', 'CSS0041102' => 'camsi', 'CSS0041261' => 'camsi', 'CSS0046246' => 'camsi', 'CSS0049256' => 'camsi', 'DCAR_004075' => 'dca', 'DCAR_011538' => 'dca', 'DCAR_019553' => 'dca', 'DCAR_020952' => 'dca', 'DCAR_021739' => 'dca', 'DCAR_027407' => 'dca', 'DCAR_027913' => 'dca', 'DCAR_028066' => 'dca', 'Dinv05899' => 'din', 'Dinv07563' => 'din', 'Dinv08010' => 'din', 'Dinv14125' => 'din', 'Dinv20172' => 'din', 'Dinv30743' => 'din', 'Dinv31229' => 'din', 'Dinv34162' => 'din', 'Dinv36028' => 'din', 'Dinv39368' => 'din', 'Dinv40565' => 'din', 'Dinv41706' => 'din', 'Duzib052G0089' => 'dzi', 'Duzib116G0641' => 'dzi', 'Duzib132G0069' => 'dzi', 'Duzib132G1219' => 'dzi', 'Duzib147G0278' => 'dzi', 'Duzib160G0480' => 'dzi', 'Duzib170G0661' => 'dzi', 'Duzib177G0591' => 'dzi', 'Duzib187G1353' => 'dzi', 'Duzib192G0858' => 'dzi', 'Duzib192G0883' => 'dzi', 'Duzib213G0506' => 'dzi', 'Duzib235G0289' => 'dzi', 'Duzib251G0422' => 'dzi', 'ECA232G3898' => 'eca', 'ECA233G5950' => 'eca', 'ECA234G1699' => 'eca', 'ECA234G2421' => 'eca', 'ECA236G0426' => 'eca', 'ECA236G4331' => 'eca', 'ECA248G2573' => 'eca', 'EL10Ac1g00077' => 'bvu', 'EL10Ac1g01746' => 'bvu', 'EL10Ac2g03464' => 'bvu', 'EL10Ac4g08176' => 'bvu', 'EL10Ac7g17521' => 'bvu', 'EL10Ac8g20386' => 'bvu', 'EL10Ac9g21343' => 'bvu', 'EL10Ac9g22688' => 'bvu', 'Eucgr.B03434' => 'egr', 'Eucgr.D00618' => 'egr', 'Eucgr.E02395' => 'egr', 'Eucgr.F01129' => 'egr', 'Eucgr.F02622' => 'egr', 'Eucgr.F04207' => 'egr', 'FAN01G0570' => 'fan', 'FAN03G3351' => 'fan', 'FAN06G3702' => 'fan', 'FAN07G2149' => 'fan', 'FAN10G3758' => 'fan', 'FAN11G1170' => 'fan', 'FAN11G2050' => 'fan', 'FAN11G2724' => 'fan', 'FAN12G1700' => 'fan', 'FAN12G2028' => 'fan', 'FAN15G1160' => 'fan', 'FAN15G3063' => 'fan', 'FAN16G2540' => 'fan', 'FAN16G3077' => 'fan', 'FAN16G3624' => 'fan', 'FAN17G0221' => 'fan', 'FAN20G2492' => 'fan', 'FAN20G2905' => 'fan', 'FAN21G0548' => 'fan', 'FAN21G1300' => 'fan', 'FAN22G0077' => 'fan', 'FAN22G1315' => 'fan', 'FAN24G1280' => 'fan', 'FAN24G1445' => 'fan', 'FAN24G3527' => 'fan', 'FAN25G0464' => 'fan', 'FAN25G2885' => 'fan', 'FAN25G3270' => 'fan', 'FAN27G1101' => 'fan', 'FAN27G2846' => 'fan', 'FAN27G3524' => 'fan', 'FvH4_2g11770' => 'fve', 'FvH4_2g15630' => 'fve', 'FvH4_3g05570' => 'fve', 'FvH4_3g09110' => 'fve', 'FvH4_3g19940' => 'fve', 'FvH4_4g04821' => 'fve', 'FvH4_4g31480' => 'fve', 'FvH4_7g01740' => 'fve', 'Glyma.05G130400' => 'gma', 'Glyma.05G156400' => 'gma', 'Glyma.07G197000' => 'gma', 'Glyma.08G085151' => 'gma', 'Glyma.08G114500' => 'gma', 'Glyma.08G300400' => 'gma', 'Glyma.10G215800' => 'gma', 'Glyma.12G224400' => 'gma', 'Glyma.13G179300' => 'gma', 'Glyma.13G218151' => 'gma', 'Glyma.13G238800' => 'gma', 'Glyma.13G276900' => 'gma', 'Glyma.14G078200' => 'gma', 'Glyma.15G074500' => 'gma', 'Glyma.15G094100' => 'gma', 'Glyma.17G247200' => 'gma', 'Glyma.18G120100' => 'gma', 'Glyma.20G176000' => 'gma', 'Gohir.A01G063600' => 'ghi', 'Gohir.A01G170301' => 'ghi', 'Gohir.A02G060500' => 'ghi', 'Gohir.A05G133850' => 'ghi', 'Gohir.A05G161400' => 'ghi', 'Gohir.A06G012900' => 'ghi', 'Gohir.A06G035901' => 'ghi', 'Gohir.A06G127100' => 'ghi', 'Gohir.A06G210500' => 'ghi', 'Gohir.A08G008650' => 'ghi', 'Gohir.A09G072700' => 'ghi', 'Gohir.A09G088301' => 'ghi', 'Gohir.A10G040600' => 'ghi', 'Gohir.A12G036300' => 'ghi', 'Gohir.A12G143350' => 'ghi', 'Gohir.A12G165500' => 'ghi', 'Gohir.A13G145700' => 'ghi', 'Gohir.D01G050000' => 'ghi', 'Gohir.D01G051366' => 'ghi', 'Gohir.D01G161350' => 'ghi', 'Gohir.D02G065900' => 'ghi', 'Gohir.D05G164200' => 'ghi', 'Gohir.D05G355500' => 'ghi', 'Gohir.D06G010400' => 'ghi', 'Gohir.D06G111250' => 'ghi', 'Gohir.D06G132000' => 'ghi', 'Gohir.D06G210500' => 'ghi', 'Gohir.D07G165675' => 'ghi', 'Gohir.D08G062240' => 'ghi', 'Gohir.D08G086101' => 'ghi', 'Gohir.D08G138060' => 'ghi', 'Gohir.D09G072300' => 'ghi', 'Gohir.D10G041400' => 'ghi', 'Gohir.D11G191020' => 'ghi', 'Gohir.D11G212066' => 'ghi', 'Gohir.D12G036300' => 'ghi', 'Gohir.D12G168600' => 'ghi', 'Gohir.D13G150600' => 'ghi', 'Gorai.001G057300' => 'gra', 'Gorai.002G069900' => 'gra', 'Gorai.002G200000' => 'gra', 'Gorai.003G067600' => 'gra', 'Gorai.005G074800' => 'gra', 'Gorai.006G087300' => 'gra', 'Gorai.008G037500' => 'gra', 'Gorai.008G181400' => 'gra', 'Gorai.009G169400' => 'gra', 'Gorai.009G387900' => 'gra', 'Gorai.010G013300' => 'gra', 'Gorai.010G153800' => 'gra', 'Gorai.010G255800' => 'gra', 'Gorai.011G043700' => 'gra', 'Gorai.011G198900' => 'gra', 'Gorai.013G168400' => 'gra', 'GSVIVG01005212001' => 'vvi', 'GSVIVG01006163001' => 'vvi', 'GSVIVG01009625001' => 'vvi', 'GSVIVG01014338001' => 'vvi', 'GSVIVG01020005001' => 'vvi', 'GSVIVG01021450001' => 'vvi', 'GSVIVG01023975001' => 'vvi', 'GSVIVG01034490001' => 'vvi', 'HanXRQChr04g0112071' => 'han', 'HanXRQChr05g0131151' => 'han', 'HanXRQChr09g0262371' => 'han', 'HanXRQChr09g0268401' => 'han', 'HanXRQChr10g0279241' => 'han', 'HanXRQChr10g0297961' => 'han', 'HanXRQChr11g0326231' => 'han', 'HanXRQChr11g0328471' => 'han', 'HanXRQChr16g0507941' => 'han', 'HanXRQChr17g0560211' => 'han', 'Haze_02108' => 'cav', 'Haze_02428' => 'cav', 'Haze_05593' => 'cav', 'Haze_06448' => 'cav', 'Haze_09427' => 'cav', 'Haze_12022' => 'cav', 'Haze_17612' => 'cav', 'Haze_17928' => 'cav', 'Hma1.2p1_0032F.1_g019250' => 'hma', 'Hma1.2p1_0163F.1_g072690' => 'hma', 'Hma1.2p1_0265F.1_g106710' => 'hma', 'Hma1.2p1_0286F.1_g113970' => 'hma', 'Hma1.2p1_0363F.1_g136640' => 'hma', 'Hma1.2p1_0584F.1_g183470' => 'hma', 'Hma1.2p1_0885F.1_g232570' => 'hma', 'HPP92_006022' => 'vpl', 'HPP92_007320' => 'vpl', 'HPP92_011521' => 'vpl', 'HPP92_019387' => 'vpl', 'HPP92_024038' => 'vpl', 'Hund05891' => 'sun', 'Hund06450' => 'sun', 'Hund12053' => 'sun', 'Hund16800' => 'sun', 'Hund21222' => 'sun', 'Hund22896' => 'sun', 'Hund23746' => 'sun', 'Hund27083' => 'sun', 'Lalb_Chr02g0141831' => 'lal', 'Lalb_Chr02g0141841' => 'lal', 'Lalb_Chr05g0220411' => 'lal', 'Lalb_Chr06g0162081' => 'lal', 'Lalb_Chr09g0327651' => 'lal', 'Lalb_Chr13g0295051' => 'lal', 'Lalb_Chr15g0086801' => 'lal', 'Lalb_Chr16g0383781' => 'lal', 'Lalb_Chr16g0383791' => 'lal', 'Lalb_Chr18g0055441' => 'lal', 'Lalb_Chr18g0059611' => 'lal', 'Lalb_Chr20g0109661' => 'lal', 'Lalb_Chr20g0109831' => 'lal', 'Lalb_Chr20g0121871' => 'lal', 'Lalb_Chr22g0355361' => 'lal', 'Lalb_Chr25g0286371' => 'lal', 'Lj1A1187G43' => 'lonja', 'Lj1A1205T50' => 'lonja', 'Lj1A800G33' => 'lonja', 'Lj1C1187T7' => 'lonja', 'Lj1C843T11' => 'lonja', 'Lj1g0010940' => 'lja', 'Lj2A288T69' => 'lonja', 'Lj3g0024276' => 'lja', 'Lj4A47T76' => 'lonja', 'Lj4g0005805' => 'lja', 'Lj4g0006097' => 'lja', 'Lj4g0008528' => 'lja', 'Lj4g0024907' => 'lja', 'Lj5g0012472' => 'lja', 'Lj5g0018648' => 'lja', 'Lj6C789G1' => 'lonja', 'Lj6g0004000' => 'lja', 'Lj7A292G67' => 'lonja', 'Lj7A292T64' => 'lonja', 'Lj9A400T58' => 'lonja', 'Lsat_1_v5_gn_1_126181' => 'lsa', 'Lsat_1_v5_gn_4_123041' => 'lsa', 'Lsat_1_v5_gn_4_133620' => 'lsa', 'Lsat_1_v5_gn_4_53221' => 'lsa', 'Lsat_1_v5_gn_4_71961' => 'lsa', 'Lsat_1_v5_gn_7_105241' => 'lsa', 'Lsat_1_v5_gn_7_21361' => 'lsa', 'Lsat_1_v5_gn_7_28860' => 'lsa', 'Lsat_1_v5_gn_7_31260' => 'lsa', 'Lsat_1_v5_gn_8_52801' => 'lsa', 'Manes.02G191400' => 'mes', 'Manes.03G110100' => 'mes', 'Manes.04G071100' => 'mes', 'Manes.05G100500' => 'mes', 'Manes.05G164700' => 'mes', 'Manes.15G087000' => 'mes', 'Manes.15G121500' => 'mes', 'Manes.16G028300' => 'mes', 'Manes.17G046100' => 'mes', 'Manes.17G069800' => 'mes', 'Manes.18G100500' => 'mes', 'Mapoly0002s0109' => 'mpo', 'Mapoly0024s0007' => 'mpo', 'Mapoly0089s0032' => 'mpo', 'MBI04_g42241_MAGBIO' => 'mbi', 'MBI05_g11988_MAGBIO' => 'mbi', 'MBI05_g35452_MAGBIO' => 'mbi', 'MBI07_g30179_MAGBIO' => 'mbi', 'MBI07_g35859_MAGBIO' => 'mbi', 'MBI07_g35860_MAGBIO' => 'mbi', 'MBI07_g37166_MAGBIO' => 'mbi', 'MBI08_g18172_MAGBIO' => 'mbi', 'MBI09_g08441_MAGBIO' => 'mbi', 'MBI13_g01676_MAGBIO' => 'mbi', 'MBI14_g42955_MAGBIO' => 'mbi', 'MBI16_g13161_MAGBIO' => 'mbi', 'MBI17_g27204_MAGBIO' => 'mbi', 'MBI19_g21595_MAGBIO' => 'mbi', 'MD00G1148400' => 'mdo', 'MD02G1301200' => 'mdo', 'MD03G1227800' => 'mdo', 'MD05G1041100' => 'mdo', 'MD05G1124800' => 'mdo', 'MD05G1284000' => 'mdo', 'MD05G1338800' => 'mdo', 'MD05G1338900' => 'mdo', 'MD07G1022800' => 'mdo', 'MD10G1047500' => 'mdo', 'MD10G1127500' => 'mdo', 'MD10G1262300' => 'mdo', 'MD10G1293800' => 'mdo', 'MD16G1074300' => 'mdo', 'Medtr1g021670' => 'mtr', 'Medtr1g096320' => 'mtr', 'Medtr2g013690' => 'mtr', 'Medtr2g019450' => 'mtr', 'Medtr2g085170' => 'mtr', 'Medtr4g088785' => 'mtr', 'Medtr8g055930' => 'mtr', 'Medtr8g085850' => 'mtr', 'MELO3C002605.2' => 'cme', 'MELO3C003891.2' => 'cme', 'MELO3C004012.2' => 'cme', 'MELO3C007134.2' => 'cme', 'MELO3C008118.2' => 'cme', 'MELO3C016700.2' => 'cme', 'MELO3C024127.2' => 'cme', 'MELO3C033361.2' => 'cme', 'MELO3C033362.2' => 'cme', 'Migut.C00430' => 'egut', 'Migut.C01246' => 'egut', 'Migut.E00101' => 'egut', 'Migut.H01486' => 'egut', 'Migut.H01939' => 'egut', 'Migut.K00360' => 'egut', 'Migut.M00910' => 'egut', 'Migut.M01139' => 'egut', 'Migut.N02677' => 'egut', 'MSTRG.13252' => 'ama', 'MSTRG.14701' => 'ama', 'MSTRG.1521' => 'ama', 'MSTRG.15884' => 'ama', 'MSTRG.16242' => 'ama', 'MSTRG.22285' => 'ama', 'MSTRG.22444' => 'ama', 'MSTRG.2349' => 'ama', 'MSTRG.26308' => 'ama', 'MSTRG.28296' => 'ama', 'MSTRG.9895' => 'ama', 'Nitab4.5_0000110g0060' => 'nta', 'Nitab4.5_0000420g0130' => 'nta', 'Nitab4.5_0000422g0030' => 'nta', 'Nitab4.5_0000560g0180' => 'nta', 'Nitab4.5_0000703g0100' => 'nta', 'Nitab4.5_0000786g0200' => 'nta', 'Nitab4.5_0001336g0020' => 'nta', 'Nitab4.5_0001796g0030' => 'nta', 'Nitab4.5_0003348g0060' => 'nta', 'Nitab4.5_0003698g0040' => 'nta', 'Nitab4.5_0003942g0090' => 'nta', 'Nitab4.5_0004775g0070' => 'nta', 'Nitab4.5_0004864g0030' => 'nta', 'Nitab4.5_0005615g0020' => 'nta', 'Nitab4.5_0009288g0030' => 'nta', 'Nitab4.5_0009341g0010' => 'nta', 'Nitab4.5_0009535g0010' => 'nta', 'Nn1g03995' => 'nnu', 'Nn1g04100' => 'nnu', 'Nn1g06530' => 'nnu', 'Nn3g16404' => 'nnu', 'Nn3g17212' => 'nnu', 'Nn3g20776' => 'nnu', 'Nn3g21923' => 'nnu', 'Nn5g27737' => 'nnu', 'Nn5g29461' => 'nnu', 'Nn7g38355' => 'nnu', 'Nn8g39873' => 'nnu', 'Oeu000548.2' => 'oeu', 'Oeu004672.1' => 'oeu', 'Oeu015605.2' => 'oeu', 'Oeu016092.1' => 'oeu', 'Oeu017879.3' => 'oeu', 'Oeu024910.1' => 'oeu', 'Oeu028965.1' => 'oeu', 'Oeu031269.1' => 'oeu', 'Oeu031270.1' => 'oeu', 'Oeu032535.1' => 'oeu', 'Oeu034151.1' => 'oeu', 'Oeu034152.1' => 'oeu', 'Oeu034588.2' => 'oeu', 'Oeu050846.1' => 'oeu', 'Oeu050849.2' => 'oeu', 'Oeu051063.2' => 'oeu', 'Oeu052368.1' => 'oeu', 'Oeu052370.1' => 'oeu', 'Os01g0210400' => 'osa', 'Os01g0304300' => 'osa', 'Os01g0749100' => 'osa', 'Os02g0745800' => 'osa', 'Os03g0769050' => 'osa', 'Os05g0531500' => 'osa', 'Os06g0724300' => 'osa', 'Os11g0198100' => 'osa', 'Peaxi162Scf00069g01425' => 'pax', 'Peaxi162Scf00280g00811' => 'pax', 'Peaxi162Scf00310g00615' => 'pax', 'Peaxi162Scf00362g00542' => 'pax', 'Peaxi162Scf00461g00310' => 'pax', 'Peaxi162Scf00530g00118' => 'pax', 'Peaxi162Scf00541g00057' => 'pax', 'Peaxi162Scf00661g00017' => 'pax', 'Peaxi162Scf00926g00027' => 'pax', 'Peaxi162Scf01064g00263' => 'pax', 'Peaxi162Scf01211g00135' => 'pax', 'PGR004G2336' => 'pgr', 'PGR042G0327' => 'pgr', 'PGR042G1957' => 'pgr', 'PGR042G2003' => 'pgr', 'PGR042G3929' => 'pgr', 'PGR083G1137' => 'pgr', 'PGR083G1364' => 'pgr', 'PGSC0003DMG400003381' => 'stu', 'PGSC0003DMG400003417' => 'stu', 'PGSC0003DMG400008981' => 'stu', 'PGSC0003DMG400012417' => 'stu', 'PGSC0003DMG400012823' => 'stu', 'PGSC0003DMG400016885' => 'stu', 'PGSC0003DMG400022812' => 'stu', 'PGSC0003DMG400029726' => 'stu', 'PGSC0003DMG401009243' => 'stu', 'PGSC0003DMG401031505' => 'stu', 'PGSC0003DMG402031505' => 'stu', 'Phvul.001G017600' => 'pvu', 'Phvul.002G193500' => 'pvu', 'Phvul.002G228900' => 'pvu', 'Phvul.002G236800' => 'pvu', 'Phvul.003G049500' => 'pvu', 'Phvul.005G072000' => 'pvu', 'Phvul.006G164800' => 'pvu', 'Phvul.006G185100' => 'pvu', 'Phvul.007G090000' => 'pvu', 'Potri.001G399800' => 'ptr', 'Potri.002G149900' => 'ptr', 'Potri.004G044100' => 'ptr', 'Potri.004G177600' => 'ptr', 'Potri.009G138000' => 'ptr', 'Potri.010G094000' => 'ptr', 'Potri.011G053000' => 'ptr', 'Potri.011G119300' => 'ptr', 'Potri.013G113700' => 'ptr', 'Potri.018G107800' => 'ptr', 'Potri.019G084100' => 'ptr', 'Pp3c14_23720' => 'ppa', 'Pp3c16_6340' => 'ppa', 'Pp3c23_13420' => 'ppa', 'Pp3c24_2740' => 'ppa', 'Pp3c25_860' => 'ppa', 'Pp3c8_21750' => 'ppa', 'Prupe.1G273000' => 'ppe', 'Prupe.1G273700' => 'ppe', 'Prupe.1G274100' => 'ppe', 'Prupe.2G023300' => 'ppe', 'Prupe.4G048000' => 'ppe', 'Prupe.4G080400' => 'ppe', 'Prupe.4G181200' => 'ppe', 'Prupe.8G056900' => 'ppe', 'Prupe.8G168700' => 'ppe', 'Psat1g189080' => 'psa', 'Psat1g204760' => 'psa', 'Psat4g175560' => 'psa', 'Psat4g177720' => 'psa', 'Psat5g244240' => 'psa', 'Psat6g010720' => 'psa', 'Psat6g187200' => 'psa', 'Psat7g072040' => 'psa', 'PSO017G3501' => 'pso', 'PSO063G2148' => 'pso', 'PSO063G5608' => 'pso', 'PSO210G6392' => 'pso', 'PSO541G2319' => 'pso', 'PSO541G2836' => 'pso', 'PSO541G4012' => 'pso', 'PSO541G6253' => 'pso', 'PSO675G0580' => 'pso', 'PSO675G0856' => 'pso', 'PSO675G5635' => 'pso', 'PSO675G9157' => 'pso', 'PSO832G1660' => 'pso', 'PSO832G1969' => 'pso', 'QL02p007186' => 'qlo', 'QL02p033904' => 'qlo', 'QL03p064391' => 'qlo', 'QL05p040593' => 'qlo', 'QL05p058242' => 'qlo', 'QL08p021825' => 'qlo', 'QL11p004981' => 'qlo', 'RcHm_v2.0_Chr1g0318301' => 'rch', 'RcHm_v2.0_Chr4g0418501' => 'rch', 'RcHm_v2.0_Chr4g0439971' => 'rch', 'RcHm_v2.0_Chr5g0008541' => 'rch', 'RcHm_v2.0_Chr5g0014101' => 'rch', 'RcHm_v2.0_Chr5g0014131' => 'rch', 'RcHm_v2.0_Chr5g0033621' => 'rch', 'RcHm_v2.0_Chr6g0272041' => 'rch', 'RcHm_v2.0_Chr6g0278831' => 'rch', 'Rhsim02G0130400' => 'rsi', 'Rhsim02G0171100' => 'rsi', 'Rhsim05G0053000' => 'rsi', 'Rhsim05G0053100' => 'rsi', 'Rhsim06G0096500' => 'rsi', 'Rhsim06G0096600' => 'rsi', 'Rhsim06G0199100' => 'rsi', 'Rhsim12G0062300' => 'rsi', 'Rhsim12G0062800' => 'rsi', 'Sabra02G0118600' => 'sbr', 'Sabra04G0027300' => 'sbr', 'Sabra04G0119500' => 'sbr', 'Sabra08G0112500' => 'sbr', 'Sabra11G0036800' => 'sbr', 'Sabra11G0103800' => 'sbr', 'Sabra13G0096300' => 'sbr', 'Sabra16G0262300' => 'sbr', 'Sabra18G0091700' => 'sbr', 'Sabra19G0095400' => 'sbr', 'SalBow6G3080' => 'sbo', 'SalBow7G1157' => 'sbo', 'SalBow7G2123' => 'sbo', 'SalBow7G2285' => 'sbo', 'SalBow7G3537' => 'sbo', 'SalBow8G2947' => 'sbo', 'SalBow8G4463' => 'sbo', 'SalBow8G5466' => 'sbo', 'Sc01g0001750' => 'sci', 'Sc02g0006640' => 'sci', 'Sc02g0006670' => 'sci', 'Sc04g0008220' => 'sci', 'Sc05g0006190' => 'sci', 'Sc08g0002760' => 'sci', 'Sc17g0006170' => 'sci', 'Sc22g0002050' => 'sci', 'Sc23g0001190' => 'sci', 'Sc24g0000980' => 'sci', 'Sed0006245' => 'sed', 'Sed0007543' => 'sed', 'Sed0009411' => 'sed', 'Sed0010765' => 'sed', 'Sed0012944' => 'sed', 'Sed0014682' => 'sed', 'Sed0016174' => 'sed', 'Sed0016796' => 'sed', 'Sed0020317' => 'sed', 'Sed0021467' => 'sed', 'SEGI_01316' => 'sgi', 'SEGI_03374' => 'sgi', 'SEGI_16265' => 'sgi', 'SEGI_18569' => 'sgi', 'SEGI_20351' => 'sgi', 'SEGI_26395' => 'sgi', 'SEGI_29469' => 'sgi', 'SEGI_34771' => 'sgi', 'SEGI_36769' => 'sgi', 'SEGI_37139' => 'sgi', 'SGA_v2.0_scaffold100G29687' => 'sas', 'SGA_v2.0_scaffold118G32472' => 'sas', 'SGA_v2.0_scaffold14G07051' => 'sas', 'SGA_v2.0_scaffold183G39845' => 'sas', 'SGA_v2.0_scaffold1G00174' => 'sas', 'SGA_v2.0_scaffold22G09714' => 'sas', 'SGA_v2.0_scaffold333G48992' => 'sas', 'SGA_v2.0_scaffold46G17491' => 'sas', 'SGA_v2.0_scaffold49G18294' => 'sas', 'SGA_v2.0_scaffold63G21658' => 'sas', 'SHI01741' => 'shi', 'SHI05771' => 'shi', 'SHI18077' => 'shi', 'SHI20525' => 'shi', 'SHI20527' => 'shi', 'SHI20528' => 'shi', 'SMO172G0185' => 'smo', 'SMO198G0020' => 'smo', 'SMO351G0006' => 'smo', 'SMO356G0118' => 'smo', 'SMO358G0296' => 'smo', 'SMO367G0079' => 'smo', 'SMO367G1277' => 'smo', 'Solyc01g014220.3' => 'sly', 'Solyc01g111770.2' => 'sly', 'Solyc02g078180.3' => 'sly', 'Solyc03g006430.3' => 'sly', 'Solyc03g006456.1' => 'sly', 'Solyc03g079860.2' => 'sly', 'Solyc04g079770.3' => 'sly', 'Solyc05g007430.4' => 'sly', 'Solyc07g063150.3' => 'sly', 'Solyc08g016620.3' => 'sly', 'Solyc09g057590.3' => 'sly', 'Solyc09g057600.1' => 'sly', 'Solyc10g009050.3' => 'sly', 'Solyc11g017420.2' => 'sly', 'Sopen01g053810' => 'spe', 'Sopen02g023040' => 'spe', 'Sopen03g002440' => 'spe', 'Sopen04g033350' => 'spe', 'Sopen05g003310' => 'spe', 'Sopen07g004050' => 'spe', 'Sopen07g031340' => 'spe', 'Sopen08g006990' => 'spe', 'Sopen10g004830' => 'spe', 'Sopen11g009370' => 'spe', 'Sp1g24450' => 'spa', 'Sp1g29670' => 'spa', 'Sp1g39600' => 'spa', 'Sp2g11080' => 'spa', 'Sp2g13970' => 'spa', 'Sp4g16130' => 'spa', 'Sp6g13080' => 'spa', 'Sp7g37270' => 'spa', 'TAR371G0065' => 'tar', 'TAR376G0340' => 'tar', 'TAR376G0435' => 'tar', 'TAR381G0002' => 'tar', 'TAR381G1236' => 'tar', 'TAR624G0055' => 'tar', 'TAR624G0324' => 'tar', 'TAR624G0696' => 'tar', 'TAR624G0906' => 'tar', 'TAR625G0107' => 'tar', 'TAR626G0015' => 'tar', 'TAR626G1356' => 'tar', 'TAR627G0888' => 'tar', 'TAR628G0399' => 'tar', 'TAR628G1327' => 'tar', 'TAR629G2831' => 'tar', 'TAR629G2874' => 'tar', 'TAR633G1432' => 'tar', 'TAR633G2771' => 'tar', 'THA.LOC104803394' => 'tha', 'THA.LOC104805153' => 'tha', 'THA.LOC104806784' => 'tha', 'THA.LOC104810473' => 'tha', 'THA.LOC104813100' => 'tha', 'THA.LOC104814215' => 'tha', 'THA.LOC104815554' => 'tha', 'THA.LOC104820544' => 'tha', 'THA.LOC104824754' => 'tha', 'THA.LOC104827717' => 'tha', 'Thecc.02G031400' => 'tca', 'Thecc.02G055900' => 'tca', 'Thecc.02G350800' => 'tca', 'Thecc.06G150900' => 'tca', 'Thecc.06G186600' => 'tca', 'Thecc.07G089600' => 'tca', 'Thecc.08G020400' => 'tca', 'Thecc.08G182100' => 'tca', 'Thhalv10000873m.g' => 'esa', 'Thhalv10004185m.g' => 'esa', 'Thhalv10006981m.g' => 'esa', 'Thhalv10007204m.g' => 'esa', 'Thhalv10011374m.g' => 'esa', 'Thhalv10013482m.g' => 'esa', 'Thhalv10017801m.g' => 'esa', 'Thhalv10024983m.g' => 'esa', 'TPR.G12072' => 'tpr', 'TPR.G15769' => 'tpr', 'TPR.G16504' => 'tpr', 'TPR.G16506' => 'tpr', 'TPR.G24345' => 'tpr', 'TPR.G26666' => 'tpr', 'TPR.G27320' => 'tpr', 'TPR.G31819' => 'tpr', 'TPR.G38879' => 'tpr', 'TPR.G39015' => 'tpr', 'TPR.G8819' => 'tpr', 'TWI09G0924' => 'twi', 'TWI12G0811' => 'twi', 'TWI12G1294' => 'twi', 'TWI31G0150' => 'twi', 'TWI36G1262' => 'twi', 'TWI38G1287' => 'twi', 'TWI38G1633' => 'twi', 'TWI38G1982' => 'twi', 'TWI39G0116' => 'twi', 'TWI60G1011' => 'twi', 'TWI63G0171' => 'twi', 'TWI73G0839' => 'twi', 'TWI79G1511' => 'twi', 'unitig_0.g915' => 'ugi', 'unitig_0.g916' => 'ugi', 'unitig_21.g20219' => 'ugi', 'unitig_21.g20416' => 'ugi', 'unitig_578.g16132' => 'ugi', 'unitig_578.g16718' => 'ugi', 'unitig_62.g23481' => 'ugi', 'unitig_744.g24535' => 'ugi', 'unitig_749.g13525' => 'ugi', 'vmacro01248' => 'vma', 'vmacro02290' => 'vma', 'vmacro10946' => 'vma', 'vmacro11865' => 'vma', 'vmacro12493' => 'vma', 'vmacro17322' => 'vma', 'vmacro21599' => 'vma', 'vmacro23041' => 'vma', 'VMungo0251G0004' => 'vmu', 'VMungo0251G2639' => 'vmu', 'VMungo0251G2967' => 'vmu', 'VMungo0540G0864' => 'vmu', 'VMungo0540G1569' => 'vmu', 'VMungo0647G0317' => 'vmu', 'VMungo0720G1373' => 'vmu', 'VMungo0720G1508' => 'vmu', 'VMungo1080G0485' => 'vmu', 'VMungo1215G3177' => 'vmu', 'Zm00001eb112600' => 'zma', 'Zm00001eb120220' => 'zma', 'Zm00001eb153240' => 'zma', 'Zm00001eb168880' => 'zma', 'Zm00001eb213920' => 'zma', 'Zm00001eb228280' => 'zma', 'Zm00001eb254580' => 'zma', 'Zm00001eb272180' => 'zma', 'Zm00001eb293190' => 'zma', 'Zm00001eb322930' => 'zma', 'Zm00001eb353360' => 'zma', 'Zm00001eb353390' => 'zma', 'Zm00001eb353430' => 'zma', 'Zm00001eb353440' => 'zma', 'Zm00001eb353780' => 'zma' ), 'gf_id' => 'HOM05D000499', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000499' ), 'data_identifier' => 'HOM05D000499', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000499', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1066', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p29780' => 'bna', 'A02p33180' => 'bna', 'A03p16470' => 'bna', 'A03p66010' => 'bna', 'A04p25970' => 'bna', 'A06p01270' => 'bna', 'A06p46080' => 'bna', 'A07p11400' => 'bna', 'A08p01840' => 'bna', 'A08p08230' => 'bna', 'A08p25740' => 'bna', 'A09p32070' => 'bna', 'A09p37830' => 'bna', 'A09p42840' => 'bna', 'A09p42850' => 'bna', 'Aa31LG10G2060' => 'aar', 'Aa31LG2G7410' => 'aar', 'Aa31LG6G10200' => 'aar', 'Aa31LG6G16680' => 'aar', 'Aa31LG6G8470' => 'aar', 'Aa31LG9G12730' => 'aar', 'Aa31LG9G13680' => 'aar', 'Aa31LG9G14920' => 'aar', 'Aa31LG9G6650' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4977' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5467' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3254' => 'aag', 'Actinidia02578' => 'ach', 'Actinidia07693' => 'ach', 'Actinidia08413' => 'ach', 'Actinidia08414' => 'ach', 'Actinidia15289' => 'ach', 'Actinidia19871' => 'ach', 'Actinidia21475' => 'ach', 'Actinidia22576' => 'ach', 'Actinidia28327' => 'ach', 'Actinidia32491' => 'ach', 'Actinidia39463' => 'ach', 'Actinidia39571' => 'ach', 'Ah.01g013750' => 'amhyb', 'Ah.01g023210' => 'amhyb', 'Ah.04g164850' => 'amhyb', 'Ah.05g178060' => 'amhyb', 'Ah.07g204270' => 'amhyb', 'Ah.07g208480' => 'amhyb', 'Ah.09g237410' => 'amhyb', 'Ah.14g089460' => 'amhyb', 'AL1G41790' => 'aly', 'AL1G49050' => 'aly', 'AL1G53810' => 'aly', 'AL1G61400' => 'aly', 'AL4G18580' => 'aly', 'AL5G12510' => 'aly', 'AL5G12540' => 'aly', 'AL6G43230' => 'aly', 'AL7G10370' => 'aly', 'AL7G19250' => 'aly', 'AL8G12240' => 'aly', 'AL8G18540' => 'aly', 'Aqoxy1G02409' => 'aox', 'Aqoxy2G03993' => 'aox', 'Aqoxy3G03357' => 'aox', 'Aqoxy4G00785' => 'aox', 'Aqoxy5G02598' => 'aox', 'Aqoxy6G00132' => 'aox', 'Aqoxy7G01776' => 'aox', 'Aqoxy7G02316' => 'aox', 'Aqoxy7G03973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.12AFKW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B8730' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27IQR1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3F75VG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3RE0GA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41TCQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.527VTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FIR39' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5W8UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DA38EV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ63HS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H1I32C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HC27T5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4M8AP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7N3CZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9UVDZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LS1NQA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT1D4B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SKC4TM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCFV76' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF9Q1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQWD9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1ZM88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WE07RT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YCK7VH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJE6Q6' => 'arhy', 'AT1G28240' => 'ath', 'AT1G34550' => 'ath', 'AT1G53040' => 'ath', 'AT2G02910' => 'ath', 'AT4G09630' => 'ath', 'AT4G38500' => 'ath', 'AT5G42660' => 'ath', 'AT5G46220' => 'ath', 'ATR0152G026' => 'atr', 'ATR0564G343' => 'atr', 'ATR0706G151' => 'atr', 'ATR0733G207' => 'atr', 'ATR0751G234' => 'atr', 'ATR0807G048' => 'atr', 'ATR1091G084' => 'atr', 'Atru.chr10.1229' => 'acertr', 'Atru.chr10.1230' => 'acertr', 'Atru.chr10.1874' => 'acertr', 'Atru.chr11.1808' => 'acertr', 'Atru.chr13.1795' => 'acertr', 'Atru.chr13.570' => 'acertr', 'Atru.chr2.2608' => 'acertr', 'Atru.chr2.2609' => 'acertr', 'Atru.chr5.3428' => 'acertr', 'Atru.chr8.1171' => 'acertr', 'AUR62004651' => 'cqu', 'AUR62008675' => 'cqu', 'AUR62010014' => 'cqu', 'AUR62013004' => 'cqu', 'AUR62014825' => 'cqu', 'AUR62015015' => 'cqu', 'AUR62015151' => 'cqu', 'AUR62017020' => 'cqu', 'AUR62019422' => 'cqu', 'AUR62023570' => 'cqu', 'AUR62025571' => 'cqu', 'AUR62029098' => 'cqu', 'AUR62033863' => 'cqu', 'AUR62034296' => 'cqu', 'AUR62040075' => 'cqu', 'BcaB02g07334' => 'bca', 'BcaB02g10575' => 'bca', 'BcaB03g12119' => 'bca', 'BcaB03g12120' => 'bca', 'BcaB03g13945' => 'bca', 'BcaB04g17123' => 'bca', 'BcaB04g17867' => 'bca', 'BcaB04g19839' => 'bca', 'BcaB07g30317' => 'bca', 'BcaB07g32432' => 'bca', 'BcaB07g33362' => 'bca', 'BcaB08g36611' => 'bca', 'BcaC01g00028' => 'bca', 'BcaC01g01356' => 'bca', 'BcaC01g02034' => 'bca', 'BcaC01g06051' => 'bca', 'BcaC03g16839' => 'bca', 'BcaC03g17176' => 'bca', 'BcaC05g26829' => 'bca', 'BcaC06g31490' => 'bca', 'BcaC06g35344' => 'bca', 'BcaC06g36570' => 'bca', 'BcaC07g37537' => 'bca', 'BcaC08g43491' => 'bca', 'BcaC08g43773' => 'bca', 'BcaNung00234' => 'bca', 'BcaNung01982' => 'bca', 'BcaNung03707' => 'bca', 'BcaNung06454' => 'bca', 'BolC2t10762H' => 'bol', 'BolC2t11191H' => 'bol', 'BolC3t14322H' => 'bol', 'BolC3t19747H' => 'bol', 'BolC3t21425H' => 'bol', 'BolC4t27800H' => 'bol', 'BolC5t31423H' => 'bol', 'BolC6t35951H' => 'bol', 'BolC6t36282H' => 'bol', 'BolC7t40678H' => 'bol', 'BolC7t40679H' => 'bol', 'BolC7t42222H' => 'bol', 'BolC7t43492H' => 'bol', 'BolC7t46785H' => 'bol', 'BolC8t47853H' => 'bol', 'BolC9t56805H' => 'bol', 'BraA02t08000Z' => 'bra', 'BraA02t08341Z' => 'bra', 'BraA03t10936Z' => 'bra', 'BraA03t15657Z' => 'bra', 'BraA04t18100Z' => 'bra', 'BraA05t20523Z' => 'bra', 'BraA06t23353Z' => 'bra', 'BraA06t27473Z' => 'bra', 'BraA06t27769Z' => 'bra', 'BraA07t28928Z' => 'bra', 'BraA08t32236Z' => 'bra', 'BraA08t32841Z' => 'bra', 'BraA08t34524Z' => 'bra', 'BraA09t38742Z' => 'bra', 'BraA09t39295Z' => 'bra', 'C02p47180' => 'bna', 'C02p50990' => 'bna', 'C03p19360' => 'bna', 'C03p74950' => 'bna', 'C03p91000' => 'bna', 'C04p63260' => 'bna', 'C05p27050' => 'bna', 'C06p08750' => 'bna', 'C06p11490' => 'bna', 'C07p02820' => 'bna', 'C07p17180' => 'bna', 'C07p29440' => 'bna', 'C07p63730' => 'bna', 'C09p39260' => 'bna', 'CAN.G1164.34' => 'can', 'CAN.G1164.39' => 'can', 'CAN.G1530.3' => 'can', 'CAN.G162.61' => 'can', 'CAN.G176.6' => 'can', 'CAN.G289.49' => 'can', 'CAN.G370.21' => 'can', 'CAN.G370.22' => 'can', 'CAN.G371.117' => 'can', 'CAN.G58.37' => 'can', 'CAN.G588.98' => 'can', 'CANSAT21G2266' => 'cansat', 'CANSAT25G2799' => 'cansat', 'CANSAT35G0862' => 'cansat', 'CANSAT35G1704' => 'cansat', 'CANSAT35G1760' => 'cansat', 'CANSAT56G3971' => 'cansat', 'CANSAT56G4116' => 'cansat', 'CANSAT80G1259' => 'cansat', 'CARHR027730' => 'chi', 'CARHR033880' => 'chi', 'CARHR043270' => 'chi', 'CARHR145330' => 'chi', 'CARHR145340' => 'chi', 'CARHR175570' => 'chi', 'CARHR181570' => 'chi', 'CARHR258470' => 'chi', 'CARHR260490' => 'chi', 'CARHR294220' => 'chi', 'Carub.0001s2668' => 'cru', 'Carub.0001s3257' => 'cru', 'Carub.0001s4220' => 'cru', 'Carub.0005s0179' => 'cru', 'Carub.0006s2807' => 'cru', 'Carub.0007s0039' => 'cru', 'Carub.0008s0169' => 'cru', 'Carub.0008s0636' => 'cru', 'Ca_00338_v3' => 'car', 'Ca_00542_v3' => 'car', 'Ca_01844_v3' => 'car', 'Ca_10611_v3' => 'car', 'Ca_13326_v3' => 'car', 'Ca_17944_v3' => 'car', 'Ca_18546_v3' => 'car', 'Ca_24219_v3' => 'car', 'Ca_29972_v3' => 'car', 'CBR_g3681' => 'cbr', 'CBR_g40021' => 'cbr', 'Cc01_g08140' => 'ccan', 'Cc02_g13410' => 'ccan', 'Cc02_g37480' => 'ccan', 'Cc05_g12030' => 'ccan', 'Cc09_g03370' => 'ccan', 'Cc09_g10300' => 'ccan', 'Cc10_g03530' => 'ccan', 'Cc10_g11380' => 'ccan', 'CDE01G0176' => 'cde', 'CDE02G0675' => 'cde', 'CDE02G0942' => 'cde', 'CDE02G1153' => 'cde', 'CDE02G4177' => 'cde', 'CDE04G2117' => 'cde', 'CDE04G2736' => 'cde', 'CDE08G1161' => 'cde', 'CDE09G1238' => 'cde', 'Cfa000467' => 'cfa', 'Cfa000947' => 'cfa', 'Cfa004969' => 'cfa', 'Cfa005284' => 'cfa', 'Cfa008993' => 'cfa', 'Cfa018187' => 'cfa', 'Cfa018454' => 'cfa', 'Cfa020585' => 'cfa', 'Ciclev10000424m.g' => 'ccl', 'Ciclev10003605m.g' => 'ccl', 'Ciclev10007828m.g' => 'ccl', 'Ciclev10014620m.g' => 'ccl', 'Ciclev10015169m.g' => 'ccl', 'Ciclev10018291m.g' => 'ccl', 'Ciclev10028256m.g' => 'ccl', 'Ciclev10033822m.g' => 'ccl', 'CiPaw.05G060300' => 'cil', 'CiPaw.05G085000' => 'cil', 'CiPaw.06G083700' => 'cil', 'CiPaw.06G120300' => 'cil', 'CiPaw.09G060500' => 'cil', 'CiPaw.09G123800' => 'cil', 'CiPaw.11G169700' => 'cil', 'CiPaw.12G118300' => 'cil', 'CiPaw.15G071000' => 'cil', 'CiPaw.15G081900' => 'cil', 'ClCG01G024610' => 'cla', 'ClCG03G006070' => 'cla', 'ClCG05G019250' => 'cla', 'ClCG09G009500' => 'cla', 'ClCG11G008200' => 'cla', 'ClCG11G018080' => 'cla', 'COL.COLO4_17373' => 'col', 'COL.COLO4_22994' => 'col', 'COL.COLO4_26389' => 'col', 'COL.COLO4_27170' => 'col', 'COL.COLO4_31074' => 'col', 'COL.COLO4_31465' => 'col', 'COL.COLO4_36438' => 'col', 'COL.COLO4_36439' => 'col', 'Cpa.g.c38781' => 'cpa', 'Cpa.g.sc128.12' => 'cpa', 'Cpa.g.sc166.7' => 'cpa', 'Cpa.g.sc166.8' => 'cpa', 'Cpa.g.sc20.111' => 'cpa', 'Cpa.g.sc27.31' => 'cpa', 'Cpa.g.sc64.36' => 'cpa', 'Cpa.g.sc64.37' => 'cpa', 'Cpa.g.sc66.49' => 'cpa', 'Cpa.g.sc80.64' => 'cpa', 'CsaV3_1G012320' => 'csa', 'CsaV3_2G008480' => 'csa', 'CsaV3_2G033450' => 'csa', 'CsaV3_3G044830' => 'csa', 'CsaV3_4G033710' => 'csa', 'CsaV3_6G051730' => 'csa', 'CsaV3_7G025350' => 'csa', 'CSS0001067' => 'camsi', 'CSS0005996' => 'camsi', 'CSS0006590' => 'camsi', 'CSS0009673' => 'camsi', 'CSS0010201' => 'camsi', 'CSS0010549' => 'camsi', 'CSS0011364' => 'camsi', 'CSS0014473' => 'camsi', 'CSS0014961' => 'camsi', 'CSS0020191' => 'camsi', 'CSS0021165' => 'camsi', 'CSS0022306' => 'camsi', 'CSS0030591' => 'camsi', 'CSS0030696' => 'camsi', 'CSS0032653' => 'camsi', 'CSS0037487' => 'camsi', 'CSS0041102' => 'camsi', 'CSS0041261' => 'camsi', 'CSS0046246' => 'camsi', 'CSS0049256' => 'camsi', 'DCAR_004075' => 'dca', 'DCAR_011538' => 'dca', 'DCAR_019553' => 'dca', 'DCAR_020952' => 'dca', 'DCAR_021739' => 'dca', 'DCAR_027407' => 'dca', 'DCAR_027913' => 'dca', 'DCAR_028066' => 'dca', 'Dinv05899' => 'din', 'Dinv07563' => 'din', 'Dinv08010' => 'din', 'Dinv14125' => 'din', 'Dinv20172' => 'din', 'Dinv30743' => 'din', 'Dinv31229' => 'din', 'Dinv34162' => 'din', 'Dinv36028' => 'din', 'Dinv39368' => 'din', 'Dinv40565' => 'din', 'Dinv41706' => 'din', 'Duzib052G0089' => 'dzi', 'Duzib116G0641' => 'dzi', 'Duzib132G0069' => 'dzi', 'Duzib132G1219' => 'dzi', 'Duzib147G0278' => 'dzi', 'Duzib160G0480' => 'dzi', 'Duzib170G0661' => 'dzi', 'Duzib177G0591' => 'dzi', 'Duzib187G1353' => 'dzi', 'Duzib192G0858' => 'dzi', 'Duzib192G0883' => 'dzi', 'Duzib213G0506' => 'dzi', 'Duzib235G0289' => 'dzi', 'Duzib251G0422' => 'dzi', 'ECA232G3898' => 'eca', 'ECA233G5950' => 'eca', 'ECA234G1699' => 'eca', 'ECA234G2421' => 'eca', 'ECA236G0426' => 'eca', 'ECA236G4331' => 'eca', 'ECA248G2573' => 'eca', 'EL10Ac1g00077' => 'bvu', 'EL10Ac1g01746' => 'bvu', 'EL10Ac2g03464' => 'bvu', 'EL10Ac4g08176' => 'bvu', 'EL10Ac7g17521' => 'bvu', 'EL10Ac8g20386' => 'bvu', 'EL10Ac9g21343' => 'bvu', 'EL10Ac9g22688' => 'bvu', 'Eucgr.B03434' => 'egr', 'Eucgr.D00618' => 'egr', 'Eucgr.E02395' => 'egr', 'Eucgr.F01129' => 'egr', 'Eucgr.F02622' => 'egr', 'Eucgr.F04207' => 'egr', 'FAN01G0570' => 'fan', 'FAN03G3351' => 'fan', 'FAN06G3702' => 'fan', 'FAN07G2149' => 'fan', 'FAN10G3758' => 'fan', 'FAN11G1170' => 'fan', 'FAN11G2050' => 'fan', 'FAN11G2724' => 'fan', 'FAN12G1700' => 'fan', 'FAN12G2028' => 'fan', 'FAN15G1160' => 'fan', 'FAN15G3063' => 'fan', 'FAN16G2540' => 'fan', 'FAN16G3077' => 'fan', 'FAN16G3624' => 'fan', 'FAN17G0221' => 'fan', 'FAN20G2492' => 'fan', 'FAN20G2905' => 'fan', 'FAN21G0548' => 'fan', 'FAN21G1300' => 'fan', 'FAN22G0077' => 'fan', 'FAN22G1315' => 'fan', 'FAN24G1280' => 'fan', 'FAN24G1445' => 'fan', 'FAN24G3527' => 'fan', 'FAN25G0464' => 'fan', 'FAN25G2885' => 'fan', 'FAN25G3270' => 'fan', 'FAN27G1101' => 'fan', 'FAN27G2846' => 'fan', 'FAN27G3524' => 'fan', 'FvH4_2g11770' => 'fve', 'FvH4_2g15630' => 'fve', 'FvH4_3g05570' => 'fve', 'FvH4_3g09110' => 'fve', 'FvH4_3g19940' => 'fve', 'FvH4_4g04821' => 'fve', 'FvH4_4g31480' => 'fve', 'FvH4_7g01740' => 'fve', 'Glyma.05G130400' => 'gma', 'Glyma.05G156400' => 'gma', 'Glyma.07G197000' => 'gma', 'Glyma.08G085151' => 'gma', 'Glyma.08G114500' => 'gma', 'Glyma.08G300400' => 'gma', 'Glyma.10G215800' => 'gma', 'Glyma.12G224400' => 'gma', 'Glyma.13G179300' => 'gma', 'Glyma.13G218151' => 'gma', 'Glyma.13G238800' => 'gma', 'Glyma.13G276900' => 'gma', 'Glyma.14G078200' => 'gma', 'Glyma.15G074500' => 'gma', 'Glyma.15G094100' => 'gma', 'Glyma.17G247200' => 'gma', 'Glyma.18G120100' => 'gma', 'Glyma.20G176000' => 'gma', 'Gohir.A01G063600' => 'ghi', 'Gohir.A01G170301' => 'ghi', 'Gohir.A02G060500' => 'ghi', 'Gohir.A05G133850' => 'ghi', 'Gohir.A05G161400' => 'ghi', 'Gohir.A06G012900' => 'ghi', 'Gohir.A06G035901' => 'ghi', 'Gohir.A06G127100' => 'ghi', 'Gohir.A06G210500' => 'ghi', 'Gohir.A08G008650' => 'ghi', 'Gohir.A09G072700' => 'ghi', 'Gohir.A09G088301' => 'ghi', 'Gohir.A10G040600' => 'ghi', 'Gohir.A12G036300' => 'ghi', 'Gohir.A12G143350' => 'ghi', 'Gohir.A12G165500' => 'ghi', 'Gohir.A13G145700' => 'ghi', 'Gohir.D01G050000' => 'ghi', 'Gohir.D01G051366' => 'ghi', 'Gohir.D01G161350' => 'ghi', 'Gohir.D02G065900' => 'ghi', 'Gohir.D05G164200' => 'ghi', 'Gohir.D05G355500' => 'ghi', 'Gohir.D06G010400' => 'ghi', 'Gohir.D06G111250' => 'ghi', 'Gohir.D06G132000' => 'ghi', 'Gohir.D06G210500' => 'ghi', 'Gohir.D07G165675' => 'ghi', 'Gohir.D08G062240' => 'ghi', 'Gohir.D08G086101' => 'ghi', 'Gohir.D08G138060' => 'ghi', 'Gohir.D09G072300' => 'ghi', 'Gohir.D10G041400' => 'ghi', 'Gohir.D11G191020' => 'ghi', 'Gohir.D11G212066' => 'ghi', 'Gohir.D12G036300' => 'ghi', 'Gohir.D12G168600' => 'ghi', 'Gohir.D13G150600' => 'ghi', 'Gorai.001G057300' => 'gra', 'Gorai.002G069900' => 'gra', 'Gorai.002G200000' => 'gra', 'Gorai.003G067600' => 'gra', 'Gorai.005G074800' => 'gra', 'Gorai.006G087300' => 'gra', 'Gorai.008G037500' => 'gra', 'Gorai.008G181400' => 'gra', 'Gorai.009G169400' => 'gra', 'Gorai.009G387900' => 'gra', 'Gorai.010G013300' => 'gra', 'Gorai.010G153800' => 'gra', 'Gorai.010G255800' => 'gra', 'Gorai.011G043700' => 'gra', 'Gorai.011G198900' => 'gra', 'Gorai.013G168400' => 'gra', 'GSVIVG01005212001' => 'vvi', 'GSVIVG01006163001' => 'vvi', 'GSVIVG01009625001' => 'vvi', 'GSVIVG01014338001' => 'vvi', 'GSVIVG01020005001' => 'vvi', 'GSVIVG01021450001' => 'vvi', 'GSVIVG01023975001' => 'vvi', 'GSVIVG01034490001' => 'vvi', 'HanXRQChr04g0112071' => 'han', 'HanXRQChr05g0131151' => 'han', 'HanXRQChr09g0262371' => 'han', 'HanXRQChr09g0268401' => 'han', 'HanXRQChr10g0279241' => 'han', 'HanXRQChr10g0297961' => 'han', 'HanXRQChr11g0326231' => 'han', 'HanXRQChr11g0328471' => 'han', 'HanXRQChr16g0507941' => 'han', 'HanXRQChr17g0560211' => 'han', 'Haze_02108' => 'cav', 'Haze_02428' => 'cav', 'Haze_05593' => 'cav', 'Haze_06448' => 'cav', 'Haze_09427' => 'cav', 'Haze_12022' => 'cav', 'Haze_17612' => 'cav', 'Haze_17928' => 'cav', 'Hma1.2p1_0032F.1_g019250' => 'hma', 'Hma1.2p1_0163F.1_g072690' => 'hma', 'Hma1.2p1_0265F.1_g106710' => 'hma', 'Hma1.2p1_0286F.1_g113970' => 'hma', 'Hma1.2p1_0363F.1_g136640' => 'hma', 'Hma1.2p1_0584F.1_g183470' => 'hma', 'Hma1.2p1_0885F.1_g232570' => 'hma', 'HPP92_006022' => 'vpl', 'HPP92_007320' => 'vpl', 'HPP92_011521' => 'vpl', 'HPP92_019387' => 'vpl', 'HPP92_024038' => 'vpl', 'Hund05891' => 'sun', 'Hund06450' => 'sun', 'Hund12053' => 'sun', 'Hund16800' => 'sun', 'Hund21222' => 'sun', 'Hund22896' => 'sun', 'Hund23746' => 'sun', 'Hund27083' => 'sun', 'Lalb_Chr02g0141831' => 'lal', 'Lalb_Chr02g0141841' => 'lal', 'Lalb_Chr05g0220411' => 'lal', 'Lalb_Chr06g0162081' => 'lal', 'Lalb_Chr09g0327651' => 'lal', 'Lalb_Chr13g0295051' => 'lal', 'Lalb_Chr15g0086801' => 'lal', 'Lalb_Chr16g0383781' => 'lal', 'Lalb_Chr16g0383791' => 'lal', 'Lalb_Chr18g0055441' => 'lal', 'Lalb_Chr18g0059611' => 'lal', 'Lalb_Chr20g0109661' => 'lal', 'Lalb_Chr20g0109831' => 'lal', 'Lalb_Chr20g0121871' => 'lal', 'Lalb_Chr22g0355361' => 'lal', 'Lalb_Chr25g0286371' => 'lal', 'Lj1A1187G43' => 'lonja', 'Lj1A1205T50' => 'lonja', 'Lj1A800G33' => 'lonja', 'Lj1C1187T7' => 'lonja', 'Lj1C843T11' => 'lonja', 'Lj1g0010940' => 'lja', 'Lj2A288T69' => 'lonja', 'Lj3g0024276' => 'lja', 'Lj4A47T76' => 'lonja', 'Lj4g0005805' => 'lja', 'Lj4g0006097' => 'lja', 'Lj4g0008528' => 'lja', 'Lj4g0024907' => 'lja', 'Lj5g0012472' => 'lja', 'Lj5g0018648' => 'lja', 'Lj6C789G1' => 'lonja', 'Lj6g0004000' => 'lja', 'Lj7A292G67' => 'lonja', 'Lj7A292T64' => 'lonja', 'Lj9A400T58' => 'lonja', 'Lsat_1_v5_gn_1_126181' => 'lsa', 'Lsat_1_v5_gn_4_123041' => 'lsa', 'Lsat_1_v5_gn_4_133620' => 'lsa', 'Lsat_1_v5_gn_4_53221' => 'lsa', 'Lsat_1_v5_gn_4_71961' => 'lsa', 'Lsat_1_v5_gn_7_105241' => 'lsa', 'Lsat_1_v5_gn_7_21361' => 'lsa', 'Lsat_1_v5_gn_7_28860' => 'lsa', 'Lsat_1_v5_gn_7_31260' => 'lsa', 'Lsat_1_v5_gn_8_52801' => 'lsa', 'Manes.02G191400' => 'mes', 'Manes.03G110100' => 'mes', 'Manes.04G071100' => 'mes', 'Manes.05G100500' => 'mes', 'Manes.05G164700' => 'mes', 'Manes.15G087000' => 'mes', 'Manes.15G121500' => 'mes', 'Manes.16G028300' => 'mes', 'Manes.17G046100' => 'mes', 'Manes.17G069800' => 'mes', 'Manes.18G100500' => 'mes', 'Mapoly0002s0109' => 'mpo', 'Mapoly0024s0007' => 'mpo', 'Mapoly0089s0032' => 'mpo', 'MBI04_g42241_MAGBIO' => 'mbi', 'MBI05_g11988_MAGBIO' => 'mbi', 'MBI05_g35452_MAGBIO' => 'mbi', 'MBI07_g30179_MAGBIO' => 'mbi', 'MBI07_g35859_MAGBIO' => 'mbi', 'MBI07_g35860_MAGBIO' => 'mbi', 'MBI07_g37166_MAGBIO' => 'mbi', 'MBI08_g18172_MAGBIO' => 'mbi', 'MBI09_g08441_MAGBIO' => 'mbi', 'MBI13_g01676_MAGBIO' => 'mbi', 'MBI14_g42955_MAGBIO' => 'mbi', 'MBI16_g13161_MAGBIO' => 'mbi', 'MBI17_g27204_MAGBIO' => 'mbi', 'MBI19_g21595_MAGBIO' => 'mbi', 'MD00G1148400' => 'mdo', 'MD02G1301200' => 'mdo', 'MD03G1227800' => 'mdo', 'MD05G1041100' => 'mdo', 'MD05G1124800' => 'mdo', 'MD05G1284000' => 'mdo', 'MD05G1338800' => 'mdo', 'MD05G1338900' => 'mdo', 'MD07G1022800' => 'mdo', 'MD10G1047500' => 'mdo', 'MD10G1127500' => 'mdo', 'MD10G1262300' => 'mdo', 'MD10G1293800' => 'mdo', 'MD16G1074300' => 'mdo', 'Medtr1g021670' => 'mtr', 'Medtr1g096320' => 'mtr', 'Medtr2g013690' => 'mtr', 'Medtr2g019450' => 'mtr', 'Medtr2g085170' => 'mtr', 'Medtr4g088785' => 'mtr', 'Medtr8g055930' => 'mtr', 'Medtr8g085850' => 'mtr', 'MELO3C002605.2' => 'cme', 'MELO3C003891.2' => 'cme', 'MELO3C004012.2' => 'cme', 'MELO3C007134.2' => 'cme', 'MELO3C008118.2' => 'cme', 'MELO3C016700.2' => 'cme', 'MELO3C024127.2' => 'cme', 'MELO3C033361.2' => 'cme', 'MELO3C033362.2' => 'cme', 'Migut.C00430' => 'egut', 'Migut.C01246' => 'egut', 'Migut.E00101' => 'egut', 'Migut.H01486' => 'egut', 'Migut.H01939' => 'egut', 'Migut.K00360' => 'egut', 'Migut.M00910' => 'egut', 'Migut.M01139' => 'egut', 'Migut.N02677' => 'egut', 'MSTRG.13252' => 'ama', 'MSTRG.14701' => 'ama', 'MSTRG.1521' => 'ama', 'MSTRG.15884' => 'ama', 'MSTRG.16242' => 'ama', 'MSTRG.22285' => 'ama', 'MSTRG.22444' => 'ama', 'MSTRG.2349' => 'ama', 'MSTRG.26308' => 'ama', 'MSTRG.28296' => 'ama', 'MSTRG.9895' => 'ama', 'Nitab4.5_0000110g0060' => 'nta', 'Nitab4.5_0000420g0130' => 'nta', 'Nitab4.5_0000422g0030' => 'nta', 'Nitab4.5_0000560g0180' => 'nta', 'Nitab4.5_0000703g0100' => 'nta', 'Nitab4.5_0000786g0200' => 'nta', 'Nitab4.5_0001336g0020' => 'nta', 'Nitab4.5_0001796g0030' => 'nta', 'Nitab4.5_0003348g0060' => 'nta', 'Nitab4.5_0003698g0040' => 'nta', 'Nitab4.5_0003942g0090' => 'nta', 'Nitab4.5_0004775g0070' => 'nta', 'Nitab4.5_0004864g0030' => 'nta', 'Nitab4.5_0005615g0020' => 'nta', 'Nitab4.5_0009288g0030' => 'nta', 'Nitab4.5_0009341g0010' => 'nta', 'Nitab4.5_0009535g0010' => 'nta', 'Nn1g03995' => 'nnu', 'Nn1g04100' => 'nnu', 'Nn1g06530' => 'nnu', 'Nn3g16404' => 'nnu', 'Nn3g17212' => 'nnu', 'Nn3g20776' => 'nnu', 'Nn3g21923' => 'nnu', 'Nn5g27737' => 'nnu', 'Nn5g29461' => 'nnu', 'Nn7g38355' => 'nnu', 'Nn8g39873' => 'nnu', 'Oeu000548.2' => 'oeu', 'Oeu004672.1' => 'oeu', 'Oeu015605.2' => 'oeu', 'Oeu016092.1' => 'oeu', 'Oeu017879.3' => 'oeu', 'Oeu024910.1' => 'oeu', 'Oeu028965.1' => 'oeu', 'Oeu031269.1' => 'oeu', 'Oeu031270.1' => 'oeu', 'Oeu032535.1' => 'oeu', 'Oeu034151.1' => 'oeu', 'Oeu034152.1' => 'oeu', 'Oeu034588.2' => 'oeu', 'Oeu050846.1' => 'oeu', 'Oeu050849.2' => 'oeu', 'Oeu051063.2' => 'oeu', 'Oeu052368.1' => 'oeu', 'Oeu052370.1' => 'oeu', 'Os01g0210400' => 'osa', 'Os01g0304300' => 'osa', 'Os01g0749100' => 'osa', 'Os02g0745800' => 'osa', 'Os03g0769050' => 'osa', 'Os05g0531500' => 'osa', 'Os06g0724300' => 'osa', 'Os11g0198100' => 'osa', 'Peaxi162Scf00069g01425' => 'pax', 'Peaxi162Scf00280g00811' => 'pax', 'Peaxi162Scf00310g00615' => 'pax', 'Peaxi162Scf00362g00542' => 'pax', 'Peaxi162Scf00461g00310' => 'pax', 'Peaxi162Scf00530g00118' => 'pax', 'Peaxi162Scf00541g00057' => 'pax', 'Peaxi162Scf00661g00017' => 'pax', 'Peaxi162Scf00926g00027' => 'pax', 'Peaxi162Scf01064g00263' => 'pax', 'Peaxi162Scf01211g00135' => 'pax', 'PGR004G2336' => 'pgr', 'PGR042G0327' => 'pgr', 'PGR042G1957' => 'pgr', 'PGR042G2003' => 'pgr', 'PGR042G3929' => 'pgr', 'PGR083G1137' => 'pgr', 'PGR083G1364' => 'pgr', 'PGSC0003DMG400003381' => 'stu', 'PGSC0003DMG400003417' => 'stu', 'PGSC0003DMG400008981' => 'stu', 'PGSC0003DMG400012417' => 'stu', 'PGSC0003DMG400012823' => 'stu', 'PGSC0003DMG400016885' => 'stu', 'PGSC0003DMG400022812' => 'stu', 'PGSC0003DMG400029726' => 'stu', 'PGSC0003DMG401009243' => 'stu', 'PGSC0003DMG401031505' => 'stu', 'PGSC0003DMG402031505' => 'stu', 'Phvul.001G017600' => 'pvu', 'Phvul.002G193500' => 'pvu', 'Phvul.002G228900' => 'pvu', 'Phvul.002G236800' => 'pvu', 'Phvul.003G049500' => 'pvu', 'Phvul.005G072000' => 'pvu', 'Phvul.006G164800' => 'pvu', 'Phvul.006G185100' => 'pvu', 'Phvul.007G090000' => 'pvu', 'Potri.001G399800' => 'ptr', 'Potri.002G149900' => 'ptr', 'Potri.004G044100' => 'ptr', 'Potri.004G177600' => 'ptr', 'Potri.009G138000' => 'ptr', 'Potri.010G094000' => 'ptr', 'Potri.011G053000' => 'ptr', 'Potri.011G119300' => 'ptr', 'Potri.013G113700' => 'ptr', 'Potri.018G107800' => 'ptr', 'Potri.019G084100' => 'ptr', 'Pp3c14_23720' => 'ppa', 'Pp3c16_6340' => 'ppa', 'Pp3c23_13420' => 'ppa', 'Pp3c24_2740' => 'ppa', 'Pp3c25_860' => 'ppa', 'Pp3c8_21750' => 'ppa', 'Prupe.1G273000' => 'ppe', 'Prupe.1G273700' => 'ppe', 'Prupe.1G274100' => 'ppe', 'Prupe.2G023300' => 'ppe', 'Prupe.4G048000' => 'ppe', 'Prupe.4G080400' => 'ppe', 'Prupe.4G181200' => 'ppe', 'Prupe.8G056900' => 'ppe', 'Prupe.8G168700' => 'ppe', 'Psat1g189080' => 'psa', 'Psat1g204760' => 'psa', 'Psat4g175560' => 'psa', 'Psat4g177720' => 'psa', 'Psat5g244240' => 'psa', 'Psat6g010720' => 'psa', 'Psat6g187200' => 'psa', 'Psat7g072040' => 'psa', 'PSO017G3501' => 'pso', 'PSO063G2148' => 'pso', 'PSO063G5608' => 'pso', 'PSO210G6392' => 'pso', 'PSO541G2319' => 'pso', 'PSO541G2836' => 'pso', 'PSO541G4012' => 'pso', 'PSO541G6253' => 'pso', 'PSO675G0580' => 'pso', 'PSO675G0856' => 'pso', 'PSO675G5635' => 'pso', 'PSO675G9157' => 'pso', 'PSO832G1660' => 'pso', 'PSO832G1969' => 'pso', 'QL02p007186' => 'qlo', 'QL02p033904' => 'qlo', 'QL03p064391' => 'qlo', 'QL05p040593' => 'qlo', 'QL05p058242' => 'qlo', 'QL08p021825' => 'qlo', 'QL11p004981' => 'qlo', 'RcHm_v2.0_Chr1g0318301' => 'rch', 'RcHm_v2.0_Chr4g0418501' => 'rch', 'RcHm_v2.0_Chr4g0439971' => 'rch', 'RcHm_v2.0_Chr5g0008541' => 'rch', 'RcHm_v2.0_Chr5g0014101' => 'rch', 'RcHm_v2.0_Chr5g0014131' => 'rch', 'RcHm_v2.0_Chr5g0033621' => 'rch', 'RcHm_v2.0_Chr6g0272041' => 'rch', 'RcHm_v2.0_Chr6g0278831' => 'rch', 'Rhsim02G0130400' => 'rsi', 'Rhsim02G0171100' => 'rsi', 'Rhsim05G0053000' => 'rsi', 'Rhsim05G0053100' => 'rsi', 'Rhsim06G0096500' => 'rsi', 'Rhsim06G0096600' => 'rsi', 'Rhsim06G0199100' => 'rsi', 'Rhsim12G0062300' => 'rsi', 'Rhsim12G0062800' => 'rsi', 'Sabra02G0118600' => 'sbr', 'Sabra04G0027300' => 'sbr', 'Sabra04G0119500' => 'sbr', 'Sabra08G0112500' => 'sbr', 'Sabra11G0036800' => 'sbr', 'Sabra11G0103800' => 'sbr', 'Sabra13G0096300' => 'sbr', 'Sabra16G0262300' => 'sbr', 'Sabra18G0091700' => 'sbr', 'Sabra19G0095400' => 'sbr', 'SalBow6G3080' => 'sbo', 'SalBow7G1157' => 'sbo', 'SalBow7G2123' => 'sbo', 'SalBow7G2285' => 'sbo', 'SalBow7G3537' => 'sbo', 'SalBow8G2947' => 'sbo', 'SalBow8G4463' => 'sbo', 'SalBow8G5466' => 'sbo', 'Sc01g0001750' => 'sci', 'Sc02g0006640' => 'sci', 'Sc02g0006670' => 'sci', 'Sc04g0008220' => 'sci', 'Sc05g0006190' => 'sci', 'Sc08g0002760' => 'sci', 'Sc17g0006170' => 'sci', 'Sc22g0002050' => 'sci', 'Sc23g0001190' => 'sci', 'Sc24g0000980' => 'sci', 'Sed0006245' => 'sed', 'Sed0007543' => 'sed', 'Sed0009411' => 'sed', 'Sed0010765' => 'sed', 'Sed0012944' => 'sed', 'Sed0014682' => 'sed', 'Sed0016174' => 'sed', 'Sed0016796' => 'sed', 'Sed0020317' => 'sed', 'Sed0021467' => 'sed', 'SEGI_01316' => 'sgi', 'SEGI_03374' => 'sgi', 'SEGI_16265' => 'sgi', 'SEGI_18569' => 'sgi', 'SEGI_20351' => 'sgi', 'SEGI_26395' => 'sgi', 'SEGI_29469' => 'sgi', 'SEGI_34771' => 'sgi', 'SEGI_36769' => 'sgi', 'SEGI_37139' => 'sgi', 'SGA_v2.0_scaffold100G29687' => 'sas', 'SGA_v2.0_scaffold118G32472' => 'sas', 'SGA_v2.0_scaffold14G07051' => 'sas', 'SGA_v2.0_scaffold183G39845' => 'sas', 'SGA_v2.0_scaffold1G00174' => 'sas', 'SGA_v2.0_scaffold22G09714' => 'sas', 'SGA_v2.0_scaffold333G48992' => 'sas', 'SGA_v2.0_scaffold46G17491' => 'sas', 'SGA_v2.0_scaffold49G18294' => 'sas', 'SGA_v2.0_scaffold63G21658' => 'sas', 'SHI01741' => 'shi', 'SHI05771' => 'shi', 'SHI18077' => 'shi', 'SHI20525' => 'shi', 'SHI20527' => 'shi', 'SHI20528' => 'shi', 'SMO172G0185' => 'smo', 'SMO198G0020' => 'smo', 'SMO351G0006' => 'smo', 'SMO356G0118' => 'smo', 'SMO358G0296' => 'smo', 'SMO367G0079' => 'smo', 'SMO367G1277' => 'smo', 'Solyc01g014220.3' => 'sly', 'Solyc01g111770.2' => 'sly', 'Solyc02g078180.3' => 'sly', 'Solyc03g006430.3' => 'sly', 'Solyc03g006456.1' => 'sly', 'Solyc03g079860.2' => 'sly', 'Solyc04g079770.3' => 'sly', 'Solyc05g007430.4' => 'sly', 'Solyc07g063150.3' => 'sly', 'Solyc08g016620.3' => 'sly', 'Solyc09g057590.3' => 'sly', 'Solyc09g057600.1' => 'sly', 'Solyc10g009050.3' => 'sly', 'Solyc11g017420.2' => 'sly', 'Sopen01g053810' => 'spe', 'Sopen02g023040' => 'spe', 'Sopen03g002440' => 'spe', 'Sopen04g033350' => 'spe', 'Sopen05g003310' => 'spe', 'Sopen07g004050' => 'spe', 'Sopen07g031340' => 'spe', 'Sopen08g006990' => 'spe', 'Sopen10g004830' => 'spe', 'Sopen11g009370' => 'spe', 'Sp1g24450' => 'spa', 'Sp1g29670' => 'spa', 'Sp1g39600' => 'spa', 'Sp2g11080' => 'spa', 'Sp2g13970' => 'spa', 'Sp4g16130' => 'spa', 'Sp6g13080' => 'spa', 'Sp7g37270' => 'spa', 'TAR371G0065' => 'tar', 'TAR376G0340' => 'tar', 'TAR376G0435' => 'tar', 'TAR381G0002' => 'tar', 'TAR381G1236' => 'tar', 'TAR624G0055' => 'tar', 'TAR624G0324' => 'tar', 'TAR624G0696' => 'tar', 'TAR624G0906' => 'tar', 'TAR625G0107' => 'tar', 'TAR626G0015' => 'tar', 'TAR626G1356' => 'tar', 'TAR627G0888' => 'tar', 'TAR628G0399' => 'tar', 'TAR628G1327' => 'tar', 'TAR629G2831' => 'tar', 'TAR629G2874' => 'tar', 'TAR633G1432' => 'tar', 'TAR633G2771' => 'tar', 'THA.LOC104803394' => 'tha', 'THA.LOC104805153' => 'tha', 'THA.LOC104806784' => 'tha', 'THA.LOC104810473' => 'tha', 'THA.LOC104813100' => 'tha', 'THA.LOC104814215' => 'tha', 'THA.LOC104815554' => 'tha', 'THA.LOC104820544' => 'tha', 'THA.LOC104824754' => 'tha', 'THA.LOC104827717' => 'tha', 'Thecc.02G031400' => 'tca', 'Thecc.02G055900' => 'tca', 'Thecc.02G350800' => 'tca', 'Thecc.06G150900' => 'tca', 'Thecc.06G186600' => 'tca', 'Thecc.07G089600' => 'tca', 'Thecc.08G020400' => 'tca', 'Thecc.08G182100' => 'tca', 'Thhalv10000873m.g' => 'esa', 'Thhalv10004185m.g' => 'esa', 'Thhalv10006981m.g' => 'esa', 'Thhalv10007204m.g' => 'esa', 'Thhalv10011374m.g' => 'esa', 'Thhalv10013482m.g' => 'esa', 'Thhalv10017801m.g' => 'esa', 'Thhalv10024983m.g' => 'esa', 'TPR.G12072' => 'tpr', 'TPR.G15769' => 'tpr', 'TPR.G16504' => 'tpr', 'TPR.G16506' => 'tpr', 'TPR.G24345' => 'tpr', 'TPR.G26666' => 'tpr', 'TPR.G27320' => 'tpr', 'TPR.G31819' => 'tpr', 'TPR.G38879' => 'tpr', 'TPR.G39015' => 'tpr', 'TPR.G8819' => 'tpr', 'TWI09G0924' => 'twi', 'TWI12G0811' => 'twi', 'TWI12G1294' => 'twi', 'TWI31G0150' => 'twi', 'TWI36G1262' => 'twi', 'TWI38G1287' => 'twi', 'TWI38G1633' => 'twi', 'TWI38G1982' => 'twi', 'TWI39G0116' => 'twi', 'TWI60G1011' => 'twi', 'TWI63G0171' => 'twi', 'TWI73G0839' => 'twi', 'TWI79G1511' => 'twi', 'unitig_0.g915' => 'ugi', 'unitig_0.g916' => 'ugi', 'unitig_21.g20219' => 'ugi', 'unitig_21.g20416' => 'ugi', 'unitig_578.g16132' => 'ugi', 'unitig_578.g16718' => 'ugi', 'unitig_62.g23481' => 'ugi', 'unitig_744.g24535' => 'ugi', 'unitig_749.g13525' => 'ugi', 'vmacro01248' => 'vma', 'vmacro02290' => 'vma', 'vmacro10946' => 'vma', 'vmacro11865' => 'vma', 'vmacro12493' => 'vma', 'vmacro17322' => 'vma', 'vmacro21599' => 'vma', 'vmacro23041' => 'vma', 'VMungo0251G0004' => 'vmu', 'VMungo0251G2639' => 'vmu', 'VMungo0251G2967' => 'vmu', 'VMungo0540G0864' => 'vmu', 'VMungo0540G1569' => 'vmu', 'VMungo0647G0317' => 'vmu', 'VMungo0720G1373' => 'vmu', 'VMungo0720G1508' => 'vmu', 'VMungo1080G0485' => 'vmu', 'VMungo1215G3177' => 'vmu', 'Zm00001eb112600' => 'zma', 'Zm00001eb120220' => 'zma', 'Zm00001eb153240' => 'zma', 'Zm00001eb168880' => 'zma', 'Zm00001eb213920' => 'zma', 'Zm00001eb228280' => 'zma', 'Zm00001eb254580' => 'zma', 'Zm00001eb272180' => 'zma', 'Zm00001eb293190' => 'zma', 'Zm00001eb322930' => 'zma', 'Zm00001eb353360' => 'zma', 'Zm00001eb353390' => 'zma', 'Zm00001eb353430' => 'zma', 'Zm00001eb353440' => 'zma', 'Zm00001eb353780' => 'zma' ) $gf_id = 'HOM05D000499' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000499' ) $data_identifier = 'HOM05D000499' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 29, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 12, 'amhyb' => (int) 8, 'aly' => (int) 12, 'aox' => (int) 9, 'arhy' => (int) 26, 'ath' => (int) 8, 'atr' => (int) 7, 'acertr' => (int) 10, 'cqu' => (int) 15, 'bca' => (int) 29, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 11, 'cansat' => (int) 8, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 9, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 8, 'cpa' => (int) 10, 'csa' => (int) 7, 'camsi' => (int) 20, 'dca' => (int) 8, 'din' => (int) 12, 'dzi' => (int) 14, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 6, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 38, 'gra' => (int) 16, 'vvi' => (int) 8, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 5, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 11, 'lja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 11, 'mpo' => (int) 3, 'mbi' => (int) 14, 'mdo' => (int) 14, 'mtr' => (int) 8, 'cme' => (int) 9, 'egut' => (int) 9, 'ama' => (int) 11, 'nta' => (int) 17, 'nnu' => (int) 11, 'oeu' => (int) 18, 'osa' => (int) 8, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 6, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 9, 'rsi' => (int) 9, 'sbr' => (int) 10, 'sbo' => (int) 8, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 10, 'sas' => (int) 10, 'shi' => (int) 6, 'smo' => (int) 7, 'sly' => (int) 14, 'spe' => (int) 10, 'spa' => (int) 8, 'tar' => (int) 19, 'tha' => (int) 10, 'tca' => (int) 8, 'esa' => (int) 8, 'tpr' => (int) 11, 'twi' => (int) 13, 'ugi' => (int) 9, 'vma' => (int) 8, 'vmu' => (int) 10, 'zma' => (int) 15 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb353780' $species_info = array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ) $local_species = 'rsi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000499', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1066', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p29780' => 'bna', 'A02p33180' => 'bna', 'A03p16470' => 'bna', 'A03p66010' => 'bna', 'A04p25970' => 'bna', 'A06p01270' => 'bna', 'A06p46080' => 'bna', 'A07p11400' => 'bna', 'A08p01840' => 'bna', 'A08p08230' => 'bna', 'A08p25740' => 'bna', 'A09p32070' => 'bna', 'A09p37830' => 'bna', 'A09p42840' => 'bna', 'A09p42850' => 'bna', 'Aa31LG10G2060' => 'aar', 'Aa31LG2G7410' => 'aar', 'Aa31LG6G10200' => 'aar', 'Aa31LG6G16680' => 'aar', 'Aa31LG6G8470' => 'aar', 'Aa31LG9G12730' => 'aar', 'Aa31LG9G13680' => 'aar', 'Aa31LG9G14920' => 'aar', 'Aa31LG9G6650' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4977' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5467' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3254' => 'aag', 'Actinidia02578' => 'ach', 'Actinidia07693' => 'ach', 'Actinidia08413' => 'ach', 'Actinidia08414' => 'ach', 'Actinidia15289' => 'ach', 'Actinidia19871' => 'ach', 'Actinidia21475' => 'ach', 'Actinidia22576' => 'ach', 'Actinidia28327' => 'ach', 'Actinidia32491' => 'ach', 'Actinidia39463' => 'ach', 'Actinidia39571' => 'ach', 'Ah.01g013750' => 'amhyb', 'Ah.01g023210' => 'amhyb', 'Ah.04g164850' => 'amhyb', 'Ah.05g178060' => 'amhyb', 'Ah.07g204270' => 'amhyb', 'Ah.07g208480' => 'amhyb', 'Ah.09g237410' => 'amhyb', 'Ah.14g089460' => 'amhyb', 'AL1G41790' => 'aly', 'AL1G49050' => 'aly', 'AL1G53810' => 'aly', 'AL1G61400' => 'aly', 'AL4G18580' => 'aly', 'AL5G12510' => 'aly', 'AL5G12540' => 'aly', 'AL6G43230' => 'aly', 'AL7G10370' => 'aly', 'AL7G19250' => 'aly', 'AL8G12240' => 'aly', 'AL8G18540' => 'aly', 'Aqoxy1G02409' => 'aox', 'Aqoxy2G03993' => 'aox', 'Aqoxy3G03357' => 'aox', 'Aqoxy4G00785' => 'aox', 'Aqoxy5G02598' => 'aox', 'Aqoxy6G00132' => 'aox', 'Aqoxy7G01776' => 'aox', 'Aqoxy7G02316' => 'aox', 'Aqoxy7G03973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.12AFKW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B8730' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27IQR1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3F75VG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3RE0GA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41TCQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.527VTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FIR39' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5W8UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DA38EV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ63HS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H1I32C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HC27T5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4M8AP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7N3CZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9UVDZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LS1NQA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT1D4B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SKC4TM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCFV76' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF9Q1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQWD9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1ZM88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WE07RT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YCK7VH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJE6Q6' => 'arhy', 'AT1G28240' => 'ath', 'AT1G34550' => 'ath', 'AT1G53040' => 'ath', 'AT2G02910' => 'ath', 'AT4G09630' => 'ath', 'AT4G38500' => 'ath', 'AT5G42660' => 'ath', 'AT5G46220' => 'ath', 'ATR0152G026' => 'atr', 'ATR0564G343' => 'atr', 'ATR0706G151' => 'atr', 'ATR0733G207' => 'atr', 'ATR0751G234' => 'atr', 'ATR0807G048' => 'atr', 'ATR1091G084' => 'atr', 'Atru.chr10.1229' => 'acertr', 'Atru.chr10.1230' => 'acertr', 'Atru.chr10.1874' => 'acertr', 'Atru.chr11.1808' => 'acertr', 'Atru.chr13.1795' => 'acertr', 'Atru.chr13.570' => 'acertr', 'Atru.chr2.2608' => 'acertr', 'Atru.chr2.2609' => 'acertr', 'Atru.chr5.3428' => 'acertr', 'Atru.chr8.1171' => 'acertr', 'AUR62004651' => 'cqu', 'AUR62008675' => 'cqu', 'AUR62010014' => 'cqu', 'AUR62013004' => 'cqu', 'AUR62014825' => 'cqu', 'AUR62015015' => 'cqu', 'AUR62015151' => 'cqu', 'AUR62017020' => 'cqu', 'AUR62019422' => 'cqu', 'AUR62023570' => 'cqu', 'AUR62025571' => 'cqu', 'AUR62029098' => 'cqu', 'AUR62033863' => 'cqu', 'AUR62034296' => 'cqu', 'AUR62040075' => 'cqu', 'BcaB02g07334' => 'bca', 'BcaB02g10575' => 'bca', 'BcaB03g12119' => 'bca', 'BcaB03g12120' => 'bca', 'BcaB03g13945' => 'bca', 'BcaB04g17123' => 'bca', 'BcaB04g17867' => 'bca', 'BcaB04g19839' => 'bca', 'BcaB07g30317' => 'bca', 'BcaB07g32432' => 'bca', 'BcaB07g33362' => 'bca', 'BcaB08g36611' => 'bca', 'BcaC01g00028' => 'bca', 'BcaC01g01356' => 'bca', 'BcaC01g02034' => 'bca', 'BcaC01g06051' => 'bca', 'BcaC03g16839' => 'bca', 'BcaC03g17176' => 'bca', 'BcaC05g26829' => 'bca', 'BcaC06g31490' => 'bca', 'BcaC06g35344' => 'bca', 'BcaC06g36570' => 'bca', 'BcaC07g37537' => 'bca', 'BcaC08g43491' => 'bca', 'BcaC08g43773' => 'bca', 'BcaNung00234' => 'bca', 'BcaNung01982' => 'bca', 'BcaNung03707' => 'bca', 'BcaNung06454' => 'bca', 'BolC2t10762H' => 'bol', 'BolC2t11191H' => 'bol', 'BolC3t14322H' => 'bol', 'BolC3t19747H' => 'bol', 'BolC3t21425H' => 'bol', 'BolC4t27800H' => 'bol', 'BolC5t31423H' => 'bol', 'BolC6t35951H' => 'bol', 'BolC6t36282H' => 'bol', 'BolC7t40678H' => 'bol', 'BolC7t40679H' => 'bol', 'BolC7t42222H' => 'bol', 'BolC7t43492H' => 'bol', 'BolC7t46785H' => 'bol', 'BolC8t47853H' => 'bol', 'BolC9t56805H' => 'bol', 'BraA02t08000Z' => 'bra', 'BraA02t08341Z' => 'bra', 'BraA03t10936Z' => 'bra', 'BraA03t15657Z' => 'bra', 'BraA04t18100Z' => 'bra', 'BraA05t20523Z' => 'bra', 'BraA06t23353Z' => 'bra', 'BraA06t27473Z' => 'bra', 'BraA06t27769Z' => 'bra', 'BraA07t28928Z' => 'bra', 'BraA08t32236Z' => 'bra', 'BraA08t32841Z' => 'bra', 'BraA08t34524Z' => 'bra', 'BraA09t38742Z' => 'bra', 'BraA09t39295Z' => 'bra', 'C02p47180' => 'bna', 'C02p50990' => 'bna', 'C03p19360' => 'bna', 'C03p74950' => 'bna', 'C03p91000' => 'bna', 'C04p63260' => 'bna', 'C05p27050' => 'bna', 'C06p08750' => 'bna', 'C06p11490' => 'bna', 'C07p02820' => 'bna', 'C07p17180' => 'bna', 'C07p29440' => 'bna', 'C07p63730' => 'bna', 'C09p39260' => 'bna', 'CAN.G1164.34' => 'can', 'CAN.G1164.39' => 'can', 'CAN.G1530.3' => 'can', 'CAN.G162.61' => 'can', 'CAN.G176.6' => 'can', 'CAN.G289.49' => 'can', 'CAN.G370.21' => 'can', 'CAN.G370.22' => 'can', 'CAN.G371.117' => 'can', 'CAN.G58.37' => 'can', 'CAN.G588.98' => 'can', 'CANSAT21G2266' => 'cansat', 'CANSAT25G2799' => 'cansat', 'CANSAT35G0862' => 'cansat', 'CANSAT35G1704' => 'cansat', 'CANSAT35G1760' => 'cansat', 'CANSAT56G3971' => 'cansat', 'CANSAT56G4116' => 'cansat', 'CANSAT80G1259' => 'cansat', 'CARHR027730' => 'chi', 'CARHR033880' => 'chi', 'CARHR043270' => 'chi', 'CARHR145330' => 'chi', 'CARHR145340' => 'chi', 'CARHR175570' => 'chi', 'CARHR181570' => 'chi', 'CARHR258470' => 'chi', 'CARHR260490' => 'chi', 'CARHR294220' => 'chi', 'Carub.0001s2668' => 'cru', 'Carub.0001s3257' => 'cru', 'Carub.0001s4220' => 'cru', 'Carub.0005s0179' => 'cru', 'Carub.0006s2807' => 'cru', 'Carub.0007s0039' => 'cru', 'Carub.0008s0169' => 'cru', 'Carub.0008s0636' => 'cru', 'Ca_00338_v3' => 'car', 'Ca_00542_v3' => 'car', 'Ca_01844_v3' => 'car', 'Ca_10611_v3' => 'car', 'Ca_13326_v3' => 'car', 'Ca_17944_v3' => 'car', 'Ca_18546_v3' => 'car', 'Ca_24219_v3' => 'car', 'Ca_29972_v3' => 'car', 'CBR_g3681' => 'cbr', 'CBR_g40021' => 'cbr', 'Cc01_g08140' => 'ccan', 'Cc02_g13410' => 'ccan', 'Cc02_g37480' => 'ccan', 'Cc05_g12030' => 'ccan', 'Cc09_g03370' => 'ccan', 'Cc09_g10300' => 'ccan', 'Cc10_g03530' => 'ccan', 'Cc10_g11380' => 'ccan', 'CDE01G0176' => 'cde', 'CDE02G0675' => 'cde', 'CDE02G0942' => 'cde', 'CDE02G1153' => 'cde', 'CDE02G4177' => 'cde', 'CDE04G2117' => 'cde', 'CDE04G2736' => 'cde', 'CDE08G1161' => 'cde', 'CDE09G1238' => 'cde', 'Cfa000467' => 'cfa', 'Cfa000947' => 'cfa', 'Cfa004969' => 'cfa', 'Cfa005284' => 'cfa', 'Cfa008993' => 'cfa', 'Cfa018187' => 'cfa', 'Cfa018454' => 'cfa', 'Cfa020585' => 'cfa', 'Ciclev10000424m.g' => 'ccl', 'Ciclev10003605m.g' => 'ccl', 'Ciclev10007828m.g' => 'ccl', 'Ciclev10014620m.g' => 'ccl', 'Ciclev10015169m.g' => 'ccl', 'Ciclev10018291m.g' => 'ccl', 'Ciclev10028256m.g' => 'ccl', 'Ciclev10033822m.g' => 'ccl', 'CiPaw.05G060300' => 'cil', 'CiPaw.05G085000' => 'cil', 'CiPaw.06G083700' => 'cil', 'CiPaw.06G120300' => 'cil', 'CiPaw.09G060500' => 'cil', 'CiPaw.09G123800' => 'cil', 'CiPaw.11G169700' => 'cil', 'CiPaw.12G118300' => 'cil', 'CiPaw.15G071000' => 'cil', 'CiPaw.15G081900' => 'cil', 'ClCG01G024610' => 'cla', 'ClCG03G006070' => 'cla', 'ClCG05G019250' => 'cla', 'ClCG09G009500' => 'cla', 'ClCG11G008200' => 'cla', 'ClCG11G018080' => 'cla', 'COL.COLO4_17373' => 'col', 'COL.COLO4_22994' => 'col', 'COL.COLO4_26389' => 'col', 'COL.COLO4_27170' => 'col', 'COL.COLO4_31074' => 'col', 'COL.COLO4_31465' => 'col', 'COL.COLO4_36438' => 'col', 'COL.COLO4_36439' => 'col', 'Cpa.g.c38781' => 'cpa', 'Cpa.g.sc128.12' => 'cpa', 'Cpa.g.sc166.7' => 'cpa', 'Cpa.g.sc166.8' => 'cpa', 'Cpa.g.sc20.111' => 'cpa', 'Cpa.g.sc27.31' => 'cpa', 'Cpa.g.sc64.36' => 'cpa', 'Cpa.g.sc64.37' => 'cpa', 'Cpa.g.sc66.49' => 'cpa', 'Cpa.g.sc80.64' => 'cpa', 'CsaV3_1G012320' => 'csa', 'CsaV3_2G008480' => 'csa', 'CsaV3_2G033450' => 'csa', 'CsaV3_3G044830' => 'csa', 'CsaV3_4G033710' => 'csa', 'CsaV3_6G051730' => 'csa', 'CsaV3_7G025350' => 'csa', 'CSS0001067' => 'camsi', 'CSS0005996' => 'camsi', 'CSS0006590' => 'camsi', 'CSS0009673' => 'camsi', 'CSS0010201' => 'camsi', 'CSS0010549' => 'camsi', 'CSS0011364' => 'camsi', 'CSS0014473' => 'camsi', 'CSS0014961' => 'camsi', 'CSS0020191' => 'camsi', 'CSS0021165' => 'camsi', 'CSS0022306' => 'camsi', 'CSS0030591' => 'camsi', 'CSS0030696' => 'camsi', 'CSS0032653' => 'camsi', 'CSS0037487' => 'camsi', 'CSS0041102' => 'camsi', 'CSS0041261' => 'camsi', 'CSS0046246' => 'camsi', 'CSS0049256' => 'camsi', 'DCAR_004075' => 'dca', 'DCAR_011538' => 'dca', 'DCAR_019553' => 'dca', 'DCAR_020952' => 'dca', 'DCAR_021739' => 'dca', 'DCAR_027407' => 'dca', 'DCAR_027913' => 'dca', 'DCAR_028066' => 'dca', 'Dinv05899' => 'din', 'Dinv07563' => 'din', 'Dinv08010' => 'din', 'Dinv14125' => 'din', 'Dinv20172' => 'din', 'Dinv30743' => 'din', 'Dinv31229' => 'din', 'Dinv34162' => 'din', 'Dinv36028' => 'din', 'Dinv39368' => 'din', 'Dinv40565' => 'din', 'Dinv41706' => 'din', 'Duzib052G0089' => 'dzi', 'Duzib116G0641' => 'dzi', 'Duzib132G0069' => 'dzi', 'Duzib132G1219' => 'dzi', 'Duzib147G0278' => 'dzi', 'Duzib160G0480' => 'dzi', 'Duzib170G0661' => 'dzi', 'Duzib177G0591' => 'dzi', 'Duzib187G1353' => 'dzi', 'Duzib192G0858' => 'dzi', 'Duzib192G0883' => 'dzi', 'Duzib213G0506' => 'dzi', 'Duzib235G0289' => 'dzi', 'Duzib251G0422' => 'dzi', 'ECA232G3898' => 'eca', 'ECA233G5950' => 'eca', 'ECA234G1699' => 'eca', 'ECA234G2421' => 'eca', 'ECA236G0426' => 'eca', 'ECA236G4331' => 'eca', 'ECA248G2573' => 'eca', 'EL10Ac1g00077' => 'bvu', 'EL10Ac1g01746' => 'bvu', 'EL10Ac2g03464' => 'bvu', 'EL10Ac4g08176' => 'bvu', 'EL10Ac7g17521' => 'bvu', 'EL10Ac8g20386' => 'bvu', 'EL10Ac9g21343' => 'bvu', 'EL10Ac9g22688' => 'bvu', 'Eucgr.B03434' => 'egr', 'Eucgr.D00618' => 'egr', 'Eucgr.E02395' => 'egr', 'Eucgr.F01129' => 'egr', 'Eucgr.F02622' => 'egr', 'Eucgr.F04207' => 'egr', 'FAN01G0570' => 'fan', 'FAN03G3351' => 'fan', 'FAN06G3702' => 'fan', 'FAN07G2149' => 'fan', 'FAN10G3758' => 'fan', 'FAN11G1170' => 'fan', 'FAN11G2050' => 'fan', 'FAN11G2724' => 'fan', 'FAN12G1700' => 'fan', 'FAN12G2028' => 'fan', 'FAN15G1160' => 'fan', 'FAN15G3063' => 'fan', 'FAN16G2540' => 'fan', 'FAN16G3077' => 'fan', 'FAN16G3624' => 'fan', 'FAN17G0221' => 'fan', 'FAN20G2492' => 'fan', 'FAN20G2905' => 'fan', 'FAN21G0548' => 'fan', 'FAN21G1300' => 'fan', 'FAN22G0077' => 'fan', 'FAN22G1315' => 'fan', 'FAN24G1280' => 'fan', 'FAN24G1445' => 'fan', 'FAN24G3527' => 'fan', 'FAN25G0464' => 'fan', 'FAN25G2885' => 'fan', 'FAN25G3270' => 'fan', 'FAN27G1101' => 'fan', 'FAN27G2846' => 'fan', 'FAN27G3524' => 'fan', 'FvH4_2g11770' => 'fve', 'FvH4_2g15630' => 'fve', 'FvH4_3g05570' => 'fve', 'FvH4_3g09110' => 'fve', 'FvH4_3g19940' => 'fve', 'FvH4_4g04821' => 'fve', 'FvH4_4g31480' => 'fve', 'FvH4_7g01740' => 'fve', 'Glyma.05G130400' => 'gma', 'Glyma.05G156400' => 'gma', 'Glyma.07G197000' => 'gma', 'Glyma.08G085151' => 'gma', 'Glyma.08G114500' => 'gma', 'Glyma.08G300400' => 'gma', 'Glyma.10G215800' => 'gma', 'Glyma.12G224400' => 'gma', 'Glyma.13G179300' => 'gma', 'Glyma.13G218151' => 'gma', 'Glyma.13G238800' => 'gma', 'Glyma.13G276900' => 'gma', 'Glyma.14G078200' => 'gma', 'Glyma.15G074500' => 'gma', 'Glyma.15G094100' => 'gma', 'Glyma.17G247200' => 'gma', 'Glyma.18G120100' => 'gma', 'Glyma.20G176000' => 'gma', 'Gohir.A01G063600' => 'ghi', 'Gohir.A01G170301' => 'ghi', 'Gohir.A02G060500' => 'ghi', 'Gohir.A05G133850' => 'ghi', 'Gohir.A05G161400' => 'ghi', 'Gohir.A06G012900' => 'ghi', 'Gohir.A06G035901' => 'ghi', 'Gohir.A06G127100' => 'ghi', 'Gohir.A06G210500' => 'ghi', 'Gohir.A08G008650' => 'ghi', 'Gohir.A09G072700' => 'ghi', 'Gohir.A09G088301' => 'ghi', 'Gohir.A10G040600' => 'ghi', 'Gohir.A12G036300' => 'ghi', 'Gohir.A12G143350' => 'ghi', 'Gohir.A12G165500' => 'ghi', 'Gohir.A13G145700' => 'ghi', 'Gohir.D01G050000' => 'ghi', 'Gohir.D01G051366' => 'ghi', 'Gohir.D01G161350' => 'ghi', 'Gohir.D02G065900' => 'ghi', 'Gohir.D05G164200' => 'ghi', 'Gohir.D05G355500' => 'ghi', 'Gohir.D06G010400' => 'ghi', 'Gohir.D06G111250' => 'ghi', 'Gohir.D06G132000' => 'ghi', 'Gohir.D06G210500' => 'ghi', 'Gohir.D07G165675' => 'ghi', 'Gohir.D08G062240' => 'ghi', 'Gohir.D08G086101' => 'ghi', 'Gohir.D08G138060' => 'ghi', 'Gohir.D09G072300' => 'ghi', 'Gohir.D10G041400' => 'ghi', 'Gohir.D11G191020' => 'ghi', 'Gohir.D11G212066' => 'ghi', 'Gohir.D12G036300' => 'ghi', 'Gohir.D12G168600' => 'ghi', 'Gohir.D13G150600' => 'ghi', 'Gorai.001G057300' => 'gra', 'Gorai.002G069900' => 'gra', 'Gorai.002G200000' => 'gra', 'Gorai.003G067600' => 'gra', 'Gorai.005G074800' => 'gra', 'Gorai.006G087300' => 'gra', 'Gorai.008G037500' => 'gra', 'Gorai.008G181400' => 'gra', 'Gorai.009G169400' => 'gra', 'Gorai.009G387900' => 'gra', 'Gorai.010G013300' => 'gra', 'Gorai.010G153800' => 'gra', 'Gorai.010G255800' => 'gra', 'Gorai.011G043700' => 'gra', 'Gorai.011G198900' => 'gra', 'Gorai.013G168400' => 'gra', 'GSVIVG01005212001' => 'vvi', 'GSVIVG01006163001' => 'vvi', 'GSVIVG01009625001' => 'vvi', 'GSVIVG01014338001' => 'vvi', 'GSVIVG01020005001' => 'vvi', 'GSVIVG01021450001' => 'vvi', 'GSVIVG01023975001' => 'vvi', 'GSVIVG01034490001' => 'vvi', 'HanXRQChr04g0112071' => 'han', 'HanXRQChr05g0131151' => 'han', 'HanXRQChr09g0262371' => 'han', 'HanXRQChr09g0268401' => 'han', 'HanXRQChr10g0279241' => 'han', 'HanXRQChr10g0297961' => 'han', 'HanXRQChr11g0326231' => 'han', 'HanXRQChr11g0328471' => 'han', 'HanXRQChr16g0507941' => 'han', 'HanXRQChr17g0560211' => 'han', 'Haze_02108' => 'cav', 'Haze_02428' => 'cav', 'Haze_05593' => 'cav', 'Haze_06448' => 'cav', 'Haze_09427' => 'cav', 'Haze_12022' => 'cav', 'Haze_17612' => 'cav', 'Haze_17928' => 'cav', 'Hma1.2p1_0032F.1_g019250' => 'hma', 'Hma1.2p1_0163F.1_g072690' => 'hma', 'Hma1.2p1_0265F.1_g106710' => 'hma', 'Hma1.2p1_0286F.1_g113970' => 'hma', 'Hma1.2p1_0363F.1_g136640' => 'hma', 'Hma1.2p1_0584F.1_g183470' => 'hma', 'Hma1.2p1_0885F.1_g232570' => 'hma', 'HPP92_006022' => 'vpl', 'HPP92_007320' => 'vpl', 'HPP92_011521' => 'vpl', 'HPP92_019387' => 'vpl', 'HPP92_024038' => 'vpl', 'Hund05891' => 'sun', 'Hund06450' => 'sun', 'Hund12053' => 'sun', 'Hund16800' => 'sun', 'Hund21222' => 'sun', 'Hund22896' => 'sun', 'Hund23746' => 'sun', 'Hund27083' => 'sun', 'Lalb_Chr02g0141831' => 'lal', 'Lalb_Chr02g0141841' => 'lal', 'Lalb_Chr05g0220411' => 'lal', 'Lalb_Chr06g0162081' => 'lal', 'Lalb_Chr09g0327651' => 'lal', 'Lalb_Chr13g0295051' => 'lal', 'Lalb_Chr15g0086801' => 'lal', 'Lalb_Chr16g0383781' => 'lal', 'Lalb_Chr16g0383791' => 'lal', 'Lalb_Chr18g0055441' => 'lal', 'Lalb_Chr18g0059611' => 'lal', 'Lalb_Chr20g0109661' => 'lal', 'Lalb_Chr20g0109831' => 'lal', 'Lalb_Chr20g0121871' => 'lal', 'Lalb_Chr22g0355361' => 'lal', 'Lalb_Chr25g0286371' => 'lal', 'Lj1A1187G43' => 'lonja', 'Lj1A1205T50' => 'lonja', 'Lj1A800G33' => 'lonja', 'Lj1C1187T7' => 'lonja', 'Lj1C843T11' => 'lonja', 'Lj1g0010940' => 'lja', 'Lj2A288T69' => 'lonja', 'Lj3g0024276' => 'lja', 'Lj4A47T76' => 'lonja', 'Lj4g0005805' => 'lja', 'Lj4g0006097' => 'lja', 'Lj4g0008528' => 'lja', 'Lj4g0024907' => 'lja', 'Lj5g0012472' => 'lja', 'Lj5g0018648' => 'lja', 'Lj6C789G1' => 'lonja', 'Lj6g0004000' => 'lja', 'Lj7A292G67' => 'lonja', 'Lj7A292T64' => 'lonja', 'Lj9A400T58' => 'lonja', 'Lsat_1_v5_gn_1_126181' => 'lsa', 'Lsat_1_v5_gn_4_123041' => 'lsa', 'Lsat_1_v5_gn_4_133620' => 'lsa', 'Lsat_1_v5_gn_4_53221' => 'lsa', 'Lsat_1_v5_gn_4_71961' => 'lsa', 'Lsat_1_v5_gn_7_105241' => 'lsa', 'Lsat_1_v5_gn_7_21361' => 'lsa', 'Lsat_1_v5_gn_7_28860' => 'lsa', 'Lsat_1_v5_gn_7_31260' => 'lsa', 'Lsat_1_v5_gn_8_52801' => 'lsa', 'Manes.02G191400' => 'mes', 'Manes.03G110100' => 'mes', 'Manes.04G071100' => 'mes', 'Manes.05G100500' => 'mes', 'Manes.05G164700' => 'mes', 'Manes.15G087000' => 'mes', 'Manes.15G121500' => 'mes', 'Manes.16G028300' => 'mes', 'Manes.17G046100' => 'mes', 'Manes.17G069800' => 'mes', 'Manes.18G100500' => 'mes', 'Mapoly0002s0109' => 'mpo', 'Mapoly0024s0007' => 'mpo', 'Mapoly0089s0032' => 'mpo', 'MBI04_g42241_MAGBIO' => 'mbi', 'MBI05_g11988_MAGBIO' => 'mbi', 'MBI05_g35452_MAGBIO' => 'mbi', 'MBI07_g30179_MAGBIO' => 'mbi', 'MBI07_g35859_MAGBIO' => 'mbi', 'MBI07_g35860_MAGBIO' => 'mbi', 'MBI07_g37166_MAGBIO' => 'mbi', 'MBI08_g18172_MAGBIO' => 'mbi', 'MBI09_g08441_MAGBIO' => 'mbi', 'MBI13_g01676_MAGBIO' => 'mbi', 'MBI14_g42955_MAGBIO' => 'mbi', 'MBI16_g13161_MAGBIO' => 'mbi', 'MBI17_g27204_MAGBIO' => 'mbi', 'MBI19_g21595_MAGBIO' => 'mbi', 'MD00G1148400' => 'mdo', 'MD02G1301200' => 'mdo', 'MD03G1227800' => 'mdo', 'MD05G1041100' => 'mdo', 'MD05G1124800' => 'mdo', 'MD05G1284000' => 'mdo', 'MD05G1338800' => 'mdo', 'MD05G1338900' => 'mdo', 'MD07G1022800' => 'mdo', 'MD10G1047500' => 'mdo', 'MD10G1127500' => 'mdo', 'MD10G1262300' => 'mdo', 'MD10G1293800' => 'mdo', 'MD16G1074300' => 'mdo', 'Medtr1g021670' => 'mtr', 'Medtr1g096320' => 'mtr', 'Medtr2g013690' => 'mtr', 'Medtr2g019450' => 'mtr', 'Medtr2g085170' => 'mtr', 'Medtr4g088785' => 'mtr', 'Medtr8g055930' => 'mtr', 'Medtr8g085850' => 'mtr', 'MELO3C002605.2' => 'cme', 'MELO3C003891.2' => 'cme', 'MELO3C004012.2' => 'cme', 'MELO3C007134.2' => 'cme', 'MELO3C008118.2' => 'cme', 'MELO3C016700.2' => 'cme', 'MELO3C024127.2' => 'cme', 'MELO3C033361.2' => 'cme', 'MELO3C033362.2' => 'cme', 'Migut.C00430' => 'egut', 'Migut.C01246' => 'egut', 'Migut.E00101' => 'egut', 'Migut.H01486' => 'egut', 'Migut.H01939' => 'egut', 'Migut.K00360' => 'egut', 'Migut.M00910' => 'egut', 'Migut.M01139' => 'egut', 'Migut.N02677' => 'egut', 'MSTRG.13252' => 'ama', 'MSTRG.14701' => 'ama', 'MSTRG.1521' => 'ama', 'MSTRG.15884' => 'ama', 'MSTRG.16242' => 'ama', 'MSTRG.22285' => 'ama', 'MSTRG.22444' => 'ama', 'MSTRG.2349' => 'ama', 'MSTRG.26308' => 'ama', 'MSTRG.28296' => 'ama', 'MSTRG.9895' => 'ama', 'Nitab4.5_0000110g0060' => 'nta', 'Nitab4.5_0000420g0130' => 'nta', 'Nitab4.5_0000422g0030' => 'nta', 'Nitab4.5_0000560g0180' => 'nta', 'Nitab4.5_0000703g0100' => 'nta', 'Nitab4.5_0000786g0200' => 'nta', 'Nitab4.5_0001336g0020' => 'nta', 'Nitab4.5_0001796g0030' => 'nta', 'Nitab4.5_0003348g0060' => 'nta', 'Nitab4.5_0003698g0040' => 'nta', 'Nitab4.5_0003942g0090' => 'nta', 'Nitab4.5_0004775g0070' => 'nta', 'Nitab4.5_0004864g0030' => 'nta', 'Nitab4.5_0005615g0020' => 'nta', 'Nitab4.5_0009288g0030' => 'nta', 'Nitab4.5_0009341g0010' => 'nta', 'Nitab4.5_0009535g0010' => 'nta', 'Nn1g03995' => 'nnu', 'Nn1g04100' => 'nnu', 'Nn1g06530' => 'nnu', 'Nn3g16404' => 'nnu', 'Nn3g17212' => 'nnu', 'Nn3g20776' => 'nnu', 'Nn3g21923' => 'nnu', 'Nn5g27737' => 'nnu', 'Nn5g29461' => 'nnu', 'Nn7g38355' => 'nnu', 'Nn8g39873' => 'nnu', 'Oeu000548.2' => 'oeu', 'Oeu004672.1' => 'oeu', 'Oeu015605.2' => 'oeu', 'Oeu016092.1' => 'oeu', 'Oeu017879.3' => 'oeu', 'Oeu024910.1' => 'oeu', 'Oeu028965.1' => 'oeu', 'Oeu031269.1' => 'oeu', 'Oeu031270.1' => 'oeu', 'Oeu032535.1' => 'oeu', 'Oeu034151.1' => 'oeu', 'Oeu034152.1' => 'oeu', 'Oeu034588.2' => 'oeu', 'Oeu050846.1' => 'oeu', 'Oeu050849.2' => 'oeu', 'Oeu051063.2' => 'oeu', 'Oeu052368.1' => 'oeu', 'Oeu052370.1' => 'oeu', 'Os01g0210400' => 'osa', 'Os01g0304300' => 'osa', 'Os01g0749100' => 'osa', 'Os02g0745800' => 'osa', 'Os03g0769050' => 'osa', 'Os05g0531500' => 'osa', 'Os06g0724300' => 'osa', 'Os11g0198100' => 'osa', 'Peaxi162Scf00069g01425' => 'pax', 'Peaxi162Scf00280g00811' => 'pax', 'Peaxi162Scf00310g00615' => 'pax', 'Peaxi162Scf00362g00542' => 'pax', 'Peaxi162Scf00461g00310' => 'pax', 'Peaxi162Scf00530g00118' => 'pax', 'Peaxi162Scf00541g00057' => 'pax', 'Peaxi162Scf00661g00017' => 'pax', 'Peaxi162Scf00926g00027' => 'pax', 'Peaxi162Scf01064g00263' => 'pax', 'Peaxi162Scf01211g00135' => 'pax', 'PGR004G2336' => 'pgr', 'PGR042G0327' => 'pgr', 'PGR042G1957' => 'pgr', 'PGR042G2003' => 'pgr', 'PGR042G3929' => 'pgr', 'PGR083G1137' => 'pgr', 'PGR083G1364' => 'pgr', 'PGSC0003DMG400003381' => 'stu', 'PGSC0003DMG400003417' => 'stu', 'PGSC0003DMG400008981' => 'stu', 'PGSC0003DMG400012417' => 'stu', 'PGSC0003DMG400012823' => 'stu', 'PGSC0003DMG400016885' => 'stu', 'PGSC0003DMG400022812' => 'stu', 'PGSC0003DMG400029726' => 'stu', 'PGSC0003DMG401009243' => 'stu', 'PGSC0003DMG401031505' => 'stu', 'PGSC0003DMG402031505' => 'stu', 'Phvul.001G017600' => 'pvu', 'Phvul.002G193500' => 'pvu', 'Phvul.002G228900' => 'pvu', 'Phvul.002G236800' => 'pvu', 'Phvul.003G049500' => 'pvu', 'Phvul.005G072000' => 'pvu', 'Phvul.006G164800' => 'pvu', 'Phvul.006G185100' => 'pvu', 'Phvul.007G090000' => 'pvu', 'Potri.001G399800' => 'ptr', 'Potri.002G149900' => 'ptr', 'Potri.004G044100' => 'ptr', 'Potri.004G177600' => 'ptr', 'Potri.009G138000' => 'ptr', 'Potri.010G094000' => 'ptr', 'Potri.011G053000' => 'ptr', 'Potri.011G119300' => 'ptr', 'Potri.013G113700' => 'ptr', 'Potri.018G107800' => 'ptr', 'Potri.019G084100' => 'ptr', 'Pp3c14_23720' => 'ppa', 'Pp3c16_6340' => 'ppa', 'Pp3c23_13420' => 'ppa', 'Pp3c24_2740' => 'ppa', 'Pp3c25_860' => 'ppa', 'Pp3c8_21750' => 'ppa', 'Prupe.1G273000' => 'ppe', 'Prupe.1G273700' => 'ppe', 'Prupe.1G274100' => 'ppe', 'Prupe.2G023300' => 'ppe', 'Prupe.4G048000' => 'ppe', 'Prupe.4G080400' => 'ppe', 'Prupe.4G181200' => 'ppe', 'Prupe.8G056900' => 'ppe', 'Prupe.8G168700' => 'ppe', 'Psat1g189080' => 'psa', 'Psat1g204760' => 'psa', 'Psat4g175560' => 'psa', 'Psat4g177720' => 'psa', 'Psat5g244240' => 'psa', 'Psat6g010720' => 'psa', 'Psat6g187200' => 'psa', 'Psat7g072040' => 'psa', 'PSO017G3501' => 'pso', 'PSO063G2148' => 'pso', 'PSO063G5608' => 'pso', 'PSO210G6392' => 'pso', 'PSO541G2319' => 'pso', 'PSO541G2836' => 'pso', 'PSO541G4012' => 'pso', 'PSO541G6253' => 'pso', 'PSO675G0580' => 'pso', 'PSO675G0856' => 'pso', 'PSO675G5635' => 'pso', 'PSO675G9157' => 'pso', 'PSO832G1660' => 'pso', 'PSO832G1969' => 'pso', 'QL02p007186' => 'qlo', 'QL02p033904' => 'qlo', 'QL03p064391' => 'qlo', 'QL05p040593' => 'qlo', 'QL05p058242' => 'qlo', 'QL08p021825' => 'qlo', 'QL11p004981' => 'qlo', 'RcHm_v2.0_Chr1g0318301' => 'rch', 'RcHm_v2.0_Chr4g0418501' => 'rch', 'RcHm_v2.0_Chr4g0439971' => 'rch', 'RcHm_v2.0_Chr5g0008541' => 'rch', 'RcHm_v2.0_Chr5g0014101' => 'rch', 'RcHm_v2.0_Chr5g0014131' => 'rch', 'RcHm_v2.0_Chr5g0033621' => 'rch', 'RcHm_v2.0_Chr6g0272041' => 'rch', 'RcHm_v2.0_Chr6g0278831' => 'rch', 'Rhsim02G0130400' => 'rsi', 'Rhsim02G0171100' => 'rsi', 'Rhsim05G0053000' => 'rsi', 'Rhsim05G0053100' => 'rsi', 'Rhsim06G0096500' => 'rsi', 'Rhsim06G0096600' => 'rsi', 'Rhsim06G0199100' => 'rsi', 'Rhsim12G0062300' => 'rsi', 'Rhsim12G0062800' => 'rsi', 'Sabra02G0118600' => 'sbr', 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'Solyc03g079860.2' => 'sly', 'Solyc04g079770.3' => 'sly', 'Solyc05g007430.4' => 'sly', 'Solyc07g063150.3' => 'sly', 'Solyc08g016620.3' => 'sly', 'Solyc09g057590.3' => 'sly', 'Solyc09g057600.1' => 'sly', 'Solyc10g009050.3' => 'sly', 'Solyc11g017420.2' => 'sly', 'Sopen01g053810' => 'spe', 'Sopen02g023040' => 'spe', 'Sopen03g002440' => 'spe', 'Sopen04g033350' => 'spe', 'Sopen05g003310' => 'spe', 'Sopen07g004050' => 'spe', 'Sopen07g031340' => 'spe', 'Sopen08g006990' => 'spe', 'Sopen10g004830' => 'spe', 'Sopen11g009370' => 'spe', 'Sp1g24450' => 'spa', 'Sp1g29670' => 'spa', 'Sp1g39600' => 'spa', 'Sp2g11080' => 'spa', 'Sp2g13970' => 'spa', 'Sp4g16130' => 'spa', 'Sp6g13080' => 'spa', 'Sp7g37270' => 'spa', 'TAR371G0065' => 'tar', 'TAR376G0340' => 'tar', 'TAR376G0435' => 'tar', 'TAR381G0002' => 'tar', 'TAR381G1236' => 'tar', 'TAR624G0055' => 'tar', 'TAR624G0324' => 'tar', 'TAR624G0696' => 'tar', 'TAR624G0906' => 'tar', 'TAR625G0107' => 'tar', 'TAR626G0015' => 'tar', 'TAR626G1356' => 'tar', 'TAR627G0888' => 'tar', 'TAR628G0399' => 'tar', 'TAR628G1327' => 'tar', 'TAR629G2831' => 'tar', 'TAR629G2874' => 'tar', 'TAR633G1432' => 'tar', 'TAR633G2771' => 'tar', 'THA.LOC104803394' => 'tha', 'THA.LOC104805153' => 'tha', 'THA.LOC104806784' => 'tha', 'THA.LOC104810473' => 'tha', 'THA.LOC104813100' => 'tha', 'THA.LOC104814215' => 'tha', 'THA.LOC104815554' => 'tha', 'THA.LOC104820544' => 'tha', 'THA.LOC104824754' => 'tha', 'THA.LOC104827717' => 'tha', 'Thecc.02G031400' => 'tca', 'Thecc.02G055900' => 'tca', 'Thecc.02G350800' => 'tca', 'Thecc.06G150900' => 'tca', 'Thecc.06G186600' => 'tca', 'Thecc.07G089600' => 'tca', 'Thecc.08G020400' => 'tca', 'Thecc.08G182100' => 'tca', 'Thhalv10000873m.g' => 'esa', 'Thhalv10004185m.g' => 'esa', 'Thhalv10006981m.g' => 'esa', 'Thhalv10007204m.g' => 'esa', 'Thhalv10011374m.g' => 'esa', 'Thhalv10013482m.g' => 'esa', 'Thhalv10017801m.g' => 'esa', 'Thhalv10024983m.g' => 'esa', 'TPR.G12072' => 'tpr', 'TPR.G15769' => 'tpr', 'TPR.G16504' => 'tpr', 'TPR.G16506' => 'tpr', 'TPR.G24345' => 'tpr', 'TPR.G26666' => 'tpr', 'TPR.G27320' => 'tpr', 'TPR.G31819' => 'tpr', 'TPR.G38879' => 'tpr', 'TPR.G39015' => 'tpr', 'TPR.G8819' => 'tpr', 'TWI09G0924' => 'twi', 'TWI12G0811' => 'twi', 'TWI12G1294' => 'twi', 'TWI31G0150' => 'twi', 'TWI36G1262' => 'twi', 'TWI38G1287' => 'twi', 'TWI38G1633' => 'twi', 'TWI38G1982' => 'twi', 'TWI39G0116' => 'twi', 'TWI60G1011' => 'twi', 'TWI63G0171' => 'twi', 'TWI73G0839' => 'twi', 'TWI79G1511' => 'twi', 'unitig_0.g915' => 'ugi', 'unitig_0.g916' => 'ugi', 'unitig_21.g20219' => 'ugi', 'unitig_21.g20416' => 'ugi', 'unitig_578.g16132' => 'ugi', 'unitig_578.g16718' => 'ugi', 'unitig_62.g23481' => 'ugi', 'unitig_744.g24535' => 'ugi', 'unitig_749.g13525' => 'ugi', 'vmacro01248' => 'vma', 'vmacro02290' => 'vma', 'vmacro10946' => 'vma', 'vmacro11865' => 'vma', 'vmacro12493' => 'vma', 'vmacro17322' => 'vma', 'vmacro21599' => 'vma', 'vmacro23041' => 'vma', 'VMungo0251G0004' => 'vmu', 'VMungo0251G2639' => 'vmu', 'VMungo0251G2967' => 'vmu', 'VMungo0540G0864' => 'vmu', 'VMungo0540G1569' => 'vmu', 'VMungo0647G0317' => 'vmu', 'VMungo0720G1373' => 'vmu', 'VMungo0720G1508' => 'vmu', 'VMungo1080G0485' => 'vmu', 'VMungo1215G3177' => 'vmu', 'Zm00001eb112600' => 'zma', 'Zm00001eb120220' => 'zma', 'Zm00001eb153240' => 'zma', 'Zm00001eb168880' => 'zma', 'Zm00001eb213920' => 'zma', 'Zm00001eb228280' => 'zma', 'Zm00001eb254580' => 'zma', 'Zm00001eb272180' => 'zma', 'Zm00001eb293190' => 'zma', 'Zm00001eb322930' => 'zma', 'Zm00001eb353360' => 'zma', 'Zm00001eb353390' => 'zma', 'Zm00001eb353430' => 'zma', 'Zm00001eb353440' => 'zma', 'Zm00001eb353780' => 'zma' ), 'gf_id' => 'HOM05D000499', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000499' ), 'data_identifier' => 'HOM05D000499', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000499', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1066', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p29780' => 'bna', 'A02p33180' => 'bna', 'A03p16470' => 'bna', 'A03p66010' => 'bna', 'A04p25970' => 'bna', 'A06p01270' => 'bna', 'A06p46080' => 'bna', 'A07p11400' => 'bna', 'A08p01840' => 'bna', 'A08p08230' => 'bna', 'A08p25740' => 'bna', 'A09p32070' => 'bna', 'A09p37830' => 'bna', 'A09p42840' => 'bna', 'A09p42850' => 'bna', 'Aa31LG10G2060' => 'aar', 'Aa31LG2G7410' => 'aar', 'Aa31LG6G10200' => 'aar', 'Aa31LG6G16680' => 'aar', 'Aa31LG6G8470' => 'aar', 'Aa31LG9G12730' => 'aar', 'Aa31LG9G13680' => 'aar', 'Aa31LG9G14920' => 'aar', 'Aa31LG9G6650' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4977' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5467' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3254' => 'aag', 'Actinidia02578' => 'ach', 'Actinidia07693' => 'ach', 'Actinidia08413' => 'ach', 'Actinidia08414' => 'ach', 'Actinidia15289' => 'ach', 'Actinidia19871' => 'ach', 'Actinidia21475' => 'ach', 'Actinidia22576' => 'ach', 'Actinidia28327' => 'ach', 'Actinidia32491' => 'ach', 'Actinidia39463' => 'ach', 'Actinidia39571' => 'ach', 'Ah.01g013750' => 'amhyb', 'Ah.01g023210' => 'amhyb', 'Ah.04g164850' => 'amhyb', 'Ah.05g178060' => 'amhyb', 'Ah.07g204270' => 'amhyb', 'Ah.07g208480' => 'amhyb', 'Ah.09g237410' => 'amhyb', 'Ah.14g089460' => 'amhyb', 'AL1G41790' => 'aly', 'AL1G49050' => 'aly', 'AL1G53810' => 'aly', 'AL1G61400' => 'aly', 'AL4G18580' => 'aly', 'AL5G12510' => 'aly', 'AL5G12540' => 'aly', 'AL6G43230' => 'aly', 'AL7G10370' => 'aly', 'AL7G19250' => 'aly', 'AL8G12240' => 'aly', 'AL8G18540' => 'aly', 'Aqoxy1G02409' => 'aox', 'Aqoxy2G03993' => 'aox', 'Aqoxy3G03357' => 'aox', 'Aqoxy4G00785' => 'aox', 'Aqoxy5G02598' => 'aox', 'Aqoxy6G00132' => 'aox', 'Aqoxy7G01776' => 'aox', 'Aqoxy7G02316' => 'aox', 'Aqoxy7G03973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.12AFKW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B8730' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27IQR1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3F75VG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3RE0GA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41TCQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.527VTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FIR39' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5W8UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DA38EV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ63HS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H1I32C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HC27T5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4M8AP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7N3CZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9UVDZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LS1NQA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT1D4B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SKC4TM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCFV76' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF9Q1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQWD9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1ZM88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WE07RT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YCK7VH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJE6Q6' => 'arhy', 'AT1G28240' => 'ath', 'AT1G34550' => 'ath', 'AT1G53040' => 'ath', 'AT2G02910' => 'ath', 'AT4G09630' => 'ath', 'AT4G38500' => 'ath', 'AT5G42660' => 'ath', 'AT5G46220' => 'ath', 'ATR0152G026' => 'atr', 'ATR0564G343' => 'atr', 'ATR0706G151' => 'atr', 'ATR0733G207' => 'atr', 'ATR0751G234' => 'atr', 'ATR0807G048' => 'atr', 'ATR1091G084' => 'atr', 'Atru.chr10.1229' => 'acertr', 'Atru.chr10.1230' => 'acertr', 'Atru.chr10.1874' => 'acertr', 'Atru.chr11.1808' => 'acertr', 'Atru.chr13.1795' => 'acertr', 'Atru.chr13.570' => 'acertr', 'Atru.chr2.2608' => 'acertr', 'Atru.chr2.2609' => 'acertr', 'Atru.chr5.3428' => 'acertr', 'Atru.chr8.1171' => 'acertr', 'AUR62004651' => 'cqu', 'AUR62008675' => 'cqu', 'AUR62010014' => 'cqu', 'AUR62013004' => 'cqu', 'AUR62014825' => 'cqu', 'AUR62015015' => 'cqu', 'AUR62015151' => 'cqu', 'AUR62017020' => 'cqu', 'AUR62019422' => 'cqu', 'AUR62023570' => 'cqu', 'AUR62025571' => 'cqu', 'AUR62029098' => 'cqu', 'AUR62033863' => 'cqu', 'AUR62034296' => 'cqu', 'AUR62040075' => 'cqu', 'BcaB02g07334' => 'bca', 'BcaB02g10575' => 'bca', 'BcaB03g12119' => 'bca', 'BcaB03g12120' => 'bca', 'BcaB03g13945' => 'bca', 'BcaB04g17123' => 'bca', 'BcaB04g17867' => 'bca', 'BcaB04g19839' => 'bca', 'BcaB07g30317' => 'bca', 'BcaB07g32432' => 'bca', 'BcaB07g33362' => 'bca', 'BcaB08g36611' => 'bca', 'BcaC01g00028' => 'bca', 'BcaC01g01356' => 'bca', 'BcaC01g02034' => 'bca', 'BcaC01g06051' => 'bca', 'BcaC03g16839' => 'bca', 'BcaC03g17176' => 'bca', 'BcaC05g26829' => 'bca', 'BcaC06g31490' => 'bca', 'BcaC06g35344' => 'bca', 'BcaC06g36570' => 'bca', 'BcaC07g37537' => 'bca', 'BcaC08g43491' => 'bca', 'BcaC08g43773' => 'bca', 'BcaNung00234' => 'bca', 'BcaNung01982' => 'bca', 'BcaNung03707' => 'bca', 'BcaNung06454' => 'bca', 'BolC2t10762H' => 'bol', 'BolC2t11191H' => 'bol', 'BolC3t14322H' => 'bol', 'BolC3t19747H' => 'bol', 'BolC3t21425H' => 'bol', 'BolC4t27800H' => 'bol', 'BolC5t31423H' => 'bol', 'BolC6t35951H' => 'bol', 'BolC6t36282H' => 'bol', 'BolC7t40678H' => 'bol', 'BolC7t40679H' => 'bol', 'BolC7t42222H' => 'bol', 'BolC7t43492H' => 'bol', 'BolC7t46785H' => 'bol', 'BolC8t47853H' => 'bol', 'BolC9t56805H' => 'bol', 'BraA02t08000Z' => 'bra', 'BraA02t08341Z' => 'bra', 'BraA03t10936Z' => 'bra', 'BraA03t15657Z' => 'bra', 'BraA04t18100Z' => 'bra', 'BraA05t20523Z' => 'bra', 'BraA06t23353Z' => 'bra', 'BraA06t27473Z' => 'bra', 'BraA06t27769Z' => 'bra', 'BraA07t28928Z' => 'bra', 'BraA08t32236Z' => 'bra', 'BraA08t32841Z' => 'bra', 'BraA08t34524Z' => 'bra', 'BraA09t38742Z' => 'bra', 'BraA09t39295Z' => 'bra', 'C02p47180' => 'bna', 'C02p50990' => 'bna', 'C03p19360' => 'bna', 'C03p74950' => 'bna', 'C03p91000' => 'bna', 'C04p63260' => 'bna', 'C05p27050' => 'bna', 'C06p08750' => 'bna', 'C06p11490' => 'bna', 'C07p02820' => 'bna', 'C07p17180' => 'bna', 'C07p29440' => 'bna', 'C07p63730' => 'bna', 'C09p39260' => 'bna', 'CAN.G1164.34' => 'can', 'CAN.G1164.39' => 'can', 'CAN.G1530.3' => 'can', 'CAN.G162.61' => 'can', 'CAN.G176.6' => 'can', 'CAN.G289.49' => 'can', 'CAN.G370.21' => 'can', 'CAN.G370.22' => 'can', 'CAN.G371.117' => 'can', 'CAN.G58.37' => 'can', 'CAN.G588.98' => 'can', 'CANSAT21G2266' => 'cansat', 'CANSAT25G2799' => 'cansat', 'CANSAT35G0862' => 'cansat', 'CANSAT35G1704' => 'cansat', 'CANSAT35G1760' => 'cansat', 'CANSAT56G3971' => 'cansat', 'CANSAT56G4116' => 'cansat', 'CANSAT80G1259' => 'cansat', 'CARHR027730' => 'chi', 'CARHR033880' => 'chi', 'CARHR043270' => 'chi', 'CARHR145330' => 'chi', 'CARHR145340' => 'chi', 'CARHR175570' => 'chi', 'CARHR181570' => 'chi', 'CARHR258470' => 'chi', 'CARHR260490' => 'chi', 'CARHR294220' => 'chi', 'Carub.0001s2668' => 'cru', 'Carub.0001s3257' => 'cru', 'Carub.0001s4220' => 'cru', 'Carub.0005s0179' => 'cru', 'Carub.0006s2807' => 'cru', 'Carub.0007s0039' => 'cru', 'Carub.0008s0169' => 'cru', 'Carub.0008s0636' => 'cru', 'Ca_00338_v3' => 'car', 'Ca_00542_v3' => 'car', 'Ca_01844_v3' => 'car', 'Ca_10611_v3' => 'car', 'Ca_13326_v3' => 'car', 'Ca_17944_v3' => 'car', 'Ca_18546_v3' => 'car', 'Ca_24219_v3' => 'car', 'Ca_29972_v3' => 'car', 'CBR_g3681' => 'cbr', 'CBR_g40021' => 'cbr', 'Cc01_g08140' => 'ccan', 'Cc02_g13410' => 'ccan', 'Cc02_g37480' => 'ccan', 'Cc05_g12030' => 'ccan', 'Cc09_g03370' => 'ccan', 'Cc09_g10300' => 'ccan', 'Cc10_g03530' => 'ccan', 'Cc10_g11380' => 'ccan', 'CDE01G0176' => 'cde', 'CDE02G0675' => 'cde', 'CDE02G0942' => 'cde', 'CDE02G1153' => 'cde', 'CDE02G4177' => 'cde', 'CDE04G2117' => 'cde', 'CDE04G2736' => 'cde', 'CDE08G1161' => 'cde', 'CDE09G1238' => 'cde', 'Cfa000467' => 'cfa', 'Cfa000947' => 'cfa', 'Cfa004969' => 'cfa', 'Cfa005284' => 'cfa', 'Cfa008993' => 'cfa', 'Cfa018187' => 'cfa', 'Cfa018454' => 'cfa', 'Cfa020585' => 'cfa', 'Ciclev10000424m.g' => 'ccl', 'Ciclev10003605m.g' => 'ccl', 'Ciclev10007828m.g' => 'ccl', 'Ciclev10014620m.g' => 'ccl', 'Ciclev10015169m.g' => 'ccl', 'Ciclev10018291m.g' => 'ccl', 'Ciclev10028256m.g' => 'ccl', 'Ciclev10033822m.g' => 'ccl', 'CiPaw.05G060300' => 'cil', 'CiPaw.05G085000' => 'cil', 'CiPaw.06G083700' => 'cil', 'CiPaw.06G120300' => 'cil', 'CiPaw.09G060500' => 'cil', 'CiPaw.09G123800' => 'cil', 'CiPaw.11G169700' => 'cil', 'CiPaw.12G118300' => 'cil', 'CiPaw.15G071000' => 'cil', 'CiPaw.15G081900' => 'cil', 'ClCG01G024610' => 'cla', 'ClCG03G006070' => 'cla', 'ClCG05G019250' => 'cla', 'ClCG09G009500' => 'cla', 'ClCG11G008200' => 'cla', 'ClCG11G018080' => 'cla', 'COL.COLO4_17373' => 'col', 'COL.COLO4_22994' => 'col', 'COL.COLO4_26389' => 'col', 'COL.COLO4_27170' => 'col', 'COL.COLO4_31074' => 'col', 'COL.COLO4_31465' => 'col', 'COL.COLO4_36438' => 'col', 'COL.COLO4_36439' => 'col', 'Cpa.g.c38781' => 'cpa', 'Cpa.g.sc128.12' => 'cpa', 'Cpa.g.sc166.7' => 'cpa', 'Cpa.g.sc166.8' => 'cpa', 'Cpa.g.sc20.111' => 'cpa', 'Cpa.g.sc27.31' => 'cpa', 'Cpa.g.sc64.36' => 'cpa', 'Cpa.g.sc64.37' => 'cpa', 'Cpa.g.sc66.49' => 'cpa', 'Cpa.g.sc80.64' => 'cpa', 'CsaV3_1G012320' => 'csa', 'CsaV3_2G008480' => 'csa', 'CsaV3_2G033450' => 'csa', 'CsaV3_3G044830' => 'csa', 'CsaV3_4G033710' => 'csa', 'CsaV3_6G051730' => 'csa', 'CsaV3_7G025350' => 'csa', 'CSS0001067' => 'camsi', 'CSS0005996' => 'camsi', 'CSS0006590' => 'camsi', 'CSS0009673' => 'camsi', 'CSS0010201' => 'camsi', 'CSS0010549' => 'camsi', 'CSS0011364' => 'camsi', 'CSS0014473' => 'camsi', 'CSS0014961' => 'camsi', 'CSS0020191' => 'camsi', 'CSS0021165' => 'camsi', 'CSS0022306' => 'camsi', 'CSS0030591' => 'camsi', 'CSS0030696' => 'camsi', 'CSS0032653' => 'camsi', 'CSS0037487' => 'camsi', 'CSS0041102' => 'camsi', 'CSS0041261' => 'camsi', 'CSS0046246' => 'camsi', 'CSS0049256' => 'camsi', 'DCAR_004075' => 'dca', 'DCAR_011538' => 'dca', 'DCAR_019553' => 'dca', 'DCAR_020952' => 'dca', 'DCAR_021739' => 'dca', 'DCAR_027407' => 'dca', 'DCAR_027913' => 'dca', 'DCAR_028066' => 'dca', 'Dinv05899' => 'din', 'Dinv07563' => 'din', 'Dinv08010' => 'din', 'Dinv14125' => 'din', 'Dinv20172' => 'din', 'Dinv30743' => 'din', 'Dinv31229' => 'din', 'Dinv34162' => 'din', 'Dinv36028' => 'din', 'Dinv39368' => 'din', 'Dinv40565' => 'din', 'Dinv41706' => 'din', 'Duzib052G0089' => 'dzi', 'Duzib116G0641' => 'dzi', 'Duzib132G0069' => 'dzi', 'Duzib132G1219' => 'dzi', 'Duzib147G0278' => 'dzi', 'Duzib160G0480' => 'dzi', 'Duzib170G0661' => 'dzi', 'Duzib177G0591' => 'dzi', 'Duzib187G1353' => 'dzi', 'Duzib192G0858' => 'dzi', 'Duzib192G0883' => 'dzi', 'Duzib213G0506' => 'dzi', 'Duzib235G0289' => 'dzi', 'Duzib251G0422' => 'dzi', 'ECA232G3898' => 'eca', 'ECA233G5950' => 'eca', 'ECA234G1699' => 'eca', 'ECA234G2421' => 'eca', 'ECA236G0426' => 'eca', 'ECA236G4331' => 'eca', 'ECA248G2573' => 'eca', 'EL10Ac1g00077' => 'bvu', 'EL10Ac1g01746' => 'bvu', 'EL10Ac2g03464' => 'bvu', 'EL10Ac4g08176' => 'bvu', 'EL10Ac7g17521' => 'bvu', 'EL10Ac8g20386' => 'bvu', 'EL10Ac9g21343' => 'bvu', 'EL10Ac9g22688' => 'bvu', 'Eucgr.B03434' => 'egr', 'Eucgr.D00618' => 'egr', 'Eucgr.E02395' => 'egr', 'Eucgr.F01129' => 'egr', 'Eucgr.F02622' => 'egr', 'Eucgr.F04207' => 'egr', 'FAN01G0570' => 'fan', 'FAN03G3351' => 'fan', 'FAN06G3702' => 'fan', 'FAN07G2149' => 'fan', 'FAN10G3758' => 'fan', 'FAN11G1170' => 'fan', 'FAN11G2050' => 'fan', 'FAN11G2724' => 'fan', 'FAN12G1700' => 'fan', 'FAN12G2028' => 'fan', 'FAN15G1160' => 'fan', 'FAN15G3063' => 'fan', 'FAN16G2540' => 'fan', 'FAN16G3077' => 'fan', 'FAN16G3624' => 'fan', 'FAN17G0221' => 'fan', 'FAN20G2492' => 'fan', 'FAN20G2905' => 'fan', 'FAN21G0548' => 'fan', 'FAN21G1300' => 'fan', 'FAN22G0077' => 'fan', 'FAN22G1315' => 'fan', 'FAN24G1280' => 'fan', 'FAN24G1445' => 'fan', 'FAN24G3527' => 'fan', 'FAN25G0464' => 'fan', 'FAN25G2885' => 'fan', 'FAN25G3270' => 'fan', 'FAN27G1101' => 'fan', 'FAN27G2846' => 'fan', 'FAN27G3524' => 'fan', 'FvH4_2g11770' => 'fve', 'FvH4_2g15630' => 'fve', 'FvH4_3g05570' => 'fve', 'FvH4_3g09110' => 'fve', 'FvH4_3g19940' => 'fve', 'FvH4_4g04821' => 'fve', 'FvH4_4g31480' => 'fve', 'FvH4_7g01740' => 'fve', 'Glyma.05G130400' => 'gma', 'Glyma.05G156400' => 'gma', 'Glyma.07G197000' => 'gma', 'Glyma.08G085151' => 'gma', 'Glyma.08G114500' => 'gma', 'Glyma.08G300400' => 'gma', 'Glyma.10G215800' => 'gma', 'Glyma.12G224400' => 'gma', 'Glyma.13G179300' => 'gma', 'Glyma.13G218151' => 'gma', 'Glyma.13G238800' => 'gma', 'Glyma.13G276900' => 'gma', 'Glyma.14G078200' => 'gma', 'Glyma.15G074500' => 'gma', 'Glyma.15G094100' => 'gma', 'Glyma.17G247200' => 'gma', 'Glyma.18G120100' => 'gma', 'Glyma.20G176000' => 'gma', 'Gohir.A01G063600' => 'ghi', 'Gohir.A01G170301' => 'ghi', 'Gohir.A02G060500' => 'ghi', 'Gohir.A05G133850' => 'ghi', 'Gohir.A05G161400' => 'ghi', 'Gohir.A06G012900' => 'ghi', 'Gohir.A06G035901' => 'ghi', 'Gohir.A06G127100' => 'ghi', 'Gohir.A06G210500' => 'ghi', 'Gohir.A08G008650' => 'ghi', 'Gohir.A09G072700' => 'ghi', 'Gohir.A09G088301' => 'ghi', 'Gohir.A10G040600' => 'ghi', 'Gohir.A12G036300' => 'ghi', 'Gohir.A12G143350' => 'ghi', 'Gohir.A12G165500' => 'ghi', 'Gohir.A13G145700' => 'ghi', 'Gohir.D01G050000' => 'ghi', 'Gohir.D01G051366' => 'ghi', 'Gohir.D01G161350' => 'ghi', 'Gohir.D02G065900' => 'ghi', 'Gohir.D05G164200' => 'ghi', 'Gohir.D05G355500' => 'ghi', 'Gohir.D06G010400' => 'ghi', 'Gohir.D06G111250' => 'ghi', 'Gohir.D06G132000' => 'ghi', 'Gohir.D06G210500' => 'ghi', 'Gohir.D07G165675' => 'ghi', 'Gohir.D08G062240' => 'ghi', 'Gohir.D08G086101' => 'ghi', 'Gohir.D08G138060' => 'ghi', 'Gohir.D09G072300' => 'ghi', 'Gohir.D10G041400' => 'ghi', 'Gohir.D11G191020' => 'ghi', 'Gohir.D11G212066' => 'ghi', 'Gohir.D12G036300' => 'ghi', 'Gohir.D12G168600' => 'ghi', 'Gohir.D13G150600' => 'ghi', 'Gorai.001G057300' => 'gra', 'Gorai.002G069900' => 'gra', 'Gorai.002G200000' => 'gra', 'Gorai.003G067600' => 'gra', 'Gorai.005G074800' => 'gra', 'Gorai.006G087300' => 'gra', 'Gorai.008G037500' => 'gra', 'Gorai.008G181400' => 'gra', 'Gorai.009G169400' => 'gra', 'Gorai.009G387900' => 'gra', 'Gorai.010G013300' => 'gra', 'Gorai.010G153800' => 'gra', 'Gorai.010G255800' => 'gra', 'Gorai.011G043700' => 'gra', 'Gorai.011G198900' => 'gra', 'Gorai.013G168400' => 'gra', 'GSVIVG01005212001' => 'vvi', 'GSVIVG01006163001' => 'vvi', 'GSVIVG01009625001' => 'vvi', 'GSVIVG01014338001' => 'vvi', 'GSVIVG01020005001' => 'vvi', 'GSVIVG01021450001' => 'vvi', 'GSVIVG01023975001' => 'vvi', 'GSVIVG01034490001' => 'vvi', 'HanXRQChr04g0112071' => 'han', 'HanXRQChr05g0131151' => 'han', 'HanXRQChr09g0262371' => 'han', 'HanXRQChr09g0268401' => 'han', 'HanXRQChr10g0279241' => 'han', 'HanXRQChr10g0297961' => 'han', 'HanXRQChr11g0326231' => 'han', 'HanXRQChr11g0328471' => 'han', 'HanXRQChr16g0507941' => 'han', 'HanXRQChr17g0560211' => 'han', 'Haze_02108' => 'cav', 'Haze_02428' => 'cav', 'Haze_05593' => 'cav', 'Haze_06448' => 'cav', 'Haze_09427' => 'cav', 'Haze_12022' => 'cav', 'Haze_17612' => 'cav', 'Haze_17928' => 'cav', 'Hma1.2p1_0032F.1_g019250' => 'hma', 'Hma1.2p1_0163F.1_g072690' => 'hma', 'Hma1.2p1_0265F.1_g106710' => 'hma', 'Hma1.2p1_0286F.1_g113970' => 'hma', 'Hma1.2p1_0363F.1_g136640' => 'hma', 'Hma1.2p1_0584F.1_g183470' => 'hma', 'Hma1.2p1_0885F.1_g232570' => 'hma', 'HPP92_006022' => 'vpl', 'HPP92_007320' => 'vpl', 'HPP92_011521' => 'vpl', 'HPP92_019387' => 'vpl', 'HPP92_024038' => 'vpl', 'Hund05891' => 'sun', 'Hund06450' => 'sun', 'Hund12053' => 'sun', 'Hund16800' => 'sun', 'Hund21222' => 'sun', 'Hund22896' => 'sun', 'Hund23746' => 'sun', 'Hund27083' => 'sun', 'Lalb_Chr02g0141831' => 'lal', 'Lalb_Chr02g0141841' => 'lal', 'Lalb_Chr05g0220411' => 'lal', 'Lalb_Chr06g0162081' => 'lal', 'Lalb_Chr09g0327651' => 'lal', 'Lalb_Chr13g0295051' => 'lal', 'Lalb_Chr15g0086801' => 'lal', 'Lalb_Chr16g0383781' => 'lal', 'Lalb_Chr16g0383791' => 'lal', 'Lalb_Chr18g0055441' => 'lal', 'Lalb_Chr18g0059611' => 'lal', 'Lalb_Chr20g0109661' => 'lal', 'Lalb_Chr20g0109831' => 'lal', 'Lalb_Chr20g0121871' => 'lal', 'Lalb_Chr22g0355361' => 'lal', 'Lalb_Chr25g0286371' => 'lal', 'Lj1A1187G43' => 'lonja', 'Lj1A1205T50' => 'lonja', 'Lj1A800G33' => 'lonja', 'Lj1C1187T7' => 'lonja', 'Lj1C843T11' => 'lonja', 'Lj1g0010940' => 'lja', 'Lj2A288T69' => 'lonja', 'Lj3g0024276' => 'lja', 'Lj4A47T76' => 'lonja', 'Lj4g0005805' => 'lja', 'Lj4g0006097' => 'lja', 'Lj4g0008528' => 'lja', 'Lj4g0024907' => 'lja', 'Lj5g0012472' => 'lja', 'Lj5g0018648' => 'lja', 'Lj6C789G1' => 'lonja', 'Lj6g0004000' => 'lja', 'Lj7A292G67' => 'lonja', 'Lj7A292T64' => 'lonja', 'Lj9A400T58' => 'lonja', 'Lsat_1_v5_gn_1_126181' => 'lsa', 'Lsat_1_v5_gn_4_123041' => 'lsa', 'Lsat_1_v5_gn_4_133620' => 'lsa', 'Lsat_1_v5_gn_4_53221' => 'lsa', 'Lsat_1_v5_gn_4_71961' => 'lsa', 'Lsat_1_v5_gn_7_105241' => 'lsa', 'Lsat_1_v5_gn_7_21361' => 'lsa', 'Lsat_1_v5_gn_7_28860' => 'lsa', 'Lsat_1_v5_gn_7_31260' => 'lsa', 'Lsat_1_v5_gn_8_52801' => 'lsa', 'Manes.02G191400' => 'mes', 'Manes.03G110100' => 'mes', 'Manes.04G071100' => 'mes', 'Manes.05G100500' => 'mes', 'Manes.05G164700' => 'mes', 'Manes.15G087000' => 'mes', 'Manes.15G121500' => 'mes', 'Manes.16G028300' => 'mes', 'Manes.17G046100' => 'mes', 'Manes.17G069800' => 'mes', 'Manes.18G100500' => 'mes', 'Mapoly0002s0109' => 'mpo', 'Mapoly0024s0007' => 'mpo', 'Mapoly0089s0032' => 'mpo', 'MBI04_g42241_MAGBIO' => 'mbi', 'MBI05_g11988_MAGBIO' => 'mbi', 'MBI05_g35452_MAGBIO' => 'mbi', 'MBI07_g30179_MAGBIO' => 'mbi', 'MBI07_g35859_MAGBIO' => 'mbi', 'MBI07_g35860_MAGBIO' => 'mbi', 'MBI07_g37166_MAGBIO' => 'mbi', 'MBI08_g18172_MAGBIO' => 'mbi', 'MBI09_g08441_MAGBIO' => 'mbi', 'MBI13_g01676_MAGBIO' => 'mbi', 'MBI14_g42955_MAGBIO' => 'mbi', 'MBI16_g13161_MAGBIO' => 'mbi', 'MBI17_g27204_MAGBIO' => 'mbi', 'MBI19_g21595_MAGBIO' => 'mbi', 'MD00G1148400' => 'mdo', 'MD02G1301200' => 'mdo', 'MD03G1227800' => 'mdo', 'MD05G1041100' => 'mdo', 'MD05G1124800' => 'mdo', 'MD05G1284000' => 'mdo', 'MD05G1338800' => 'mdo', 'MD05G1338900' => 'mdo', 'MD07G1022800' => 'mdo', 'MD10G1047500' => 'mdo', 'MD10G1127500' => 'mdo', 'MD10G1262300' => 'mdo', 'MD10G1293800' => 'mdo', 'MD16G1074300' => 'mdo', 'Medtr1g021670' => 'mtr', 'Medtr1g096320' => 'mtr', 'Medtr2g013690' => 'mtr', 'Medtr2g019450' => 'mtr', 'Medtr2g085170' => 'mtr', 'Medtr4g088785' => 'mtr', 'Medtr8g055930' => 'mtr', 'Medtr8g085850' => 'mtr', 'MELO3C002605.2' => 'cme', 'MELO3C003891.2' => 'cme', 'MELO3C004012.2' => 'cme', 'MELO3C007134.2' => 'cme', 'MELO3C008118.2' => 'cme', 'MELO3C016700.2' => 'cme', 'MELO3C024127.2' => 'cme', 'MELO3C033361.2' => 'cme', 'MELO3C033362.2' => 'cme', 'Migut.C00430' => 'egut', 'Migut.C01246' => 'egut', 'Migut.E00101' => 'egut', 'Migut.H01486' => 'egut', 'Migut.H01939' => 'egut', 'Migut.K00360' => 'egut', 'Migut.M00910' => 'egut', 'Migut.M01139' => 'egut', 'Migut.N02677' => 'egut', 'MSTRG.13252' => 'ama', 'MSTRG.14701' => 'ama', 'MSTRG.1521' => 'ama', 'MSTRG.15884' => 'ama', 'MSTRG.16242' => 'ama', 'MSTRG.22285' => 'ama', 'MSTRG.22444' => 'ama', 'MSTRG.2349' => 'ama', 'MSTRG.26308' => 'ama', 'MSTRG.28296' => 'ama', 'MSTRG.9895' => 'ama', 'Nitab4.5_0000110g0060' => 'nta', 'Nitab4.5_0000420g0130' => 'nta', 'Nitab4.5_0000422g0030' => 'nta', 'Nitab4.5_0000560g0180' => 'nta', 'Nitab4.5_0000703g0100' => 'nta', 'Nitab4.5_0000786g0200' => 'nta', 'Nitab4.5_0001336g0020' => 'nta', 'Nitab4.5_0001796g0030' => 'nta', 'Nitab4.5_0003348g0060' => 'nta', 'Nitab4.5_0003698g0040' => 'nta', 'Nitab4.5_0003942g0090' => 'nta', 'Nitab4.5_0004775g0070' => 'nta', 'Nitab4.5_0004864g0030' => 'nta', 'Nitab4.5_0005615g0020' => 'nta', 'Nitab4.5_0009288g0030' => 'nta', 'Nitab4.5_0009341g0010' => 'nta', 'Nitab4.5_0009535g0010' => 'nta', 'Nn1g03995' => 'nnu', 'Nn1g04100' => 'nnu', 'Nn1g06530' => 'nnu', 'Nn3g16404' => 'nnu', 'Nn3g17212' => 'nnu', 'Nn3g20776' => 'nnu', 'Nn3g21923' => 'nnu', 'Nn5g27737' => 'nnu', 'Nn5g29461' => 'nnu', 'Nn7g38355' => 'nnu', 'Nn8g39873' => 'nnu', 'Oeu000548.2' => 'oeu', 'Oeu004672.1' => 'oeu', 'Oeu015605.2' => 'oeu', 'Oeu016092.1' => 'oeu', 'Oeu017879.3' => 'oeu', 'Oeu024910.1' => 'oeu', 'Oeu028965.1' => 'oeu', 'Oeu031269.1' => 'oeu', 'Oeu031270.1' => 'oeu', 'Oeu032535.1' => 'oeu', 'Oeu034151.1' => 'oeu', 'Oeu034152.1' => 'oeu', 'Oeu034588.2' => 'oeu', 'Oeu050846.1' => 'oeu', 'Oeu050849.2' => 'oeu', 'Oeu051063.2' => 'oeu', 'Oeu052368.1' => 'oeu', 'Oeu052370.1' => 'oeu', 'Os01g0210400' => 'osa', 'Os01g0304300' => 'osa', 'Os01g0749100' => 'osa', 'Os02g0745800' => 'osa', 'Os03g0769050' => 'osa', 'Os05g0531500' => 'osa', 'Os06g0724300' => 'osa', 'Os11g0198100' => 'osa', 'Peaxi162Scf00069g01425' => 'pax', 'Peaxi162Scf00280g00811' => 'pax', 'Peaxi162Scf00310g00615' => 'pax', 'Peaxi162Scf00362g00542' => 'pax', 'Peaxi162Scf00461g00310' => 'pax', 'Peaxi162Scf00530g00118' => 'pax', 'Peaxi162Scf00541g00057' => 'pax', 'Peaxi162Scf00661g00017' => 'pax', 'Peaxi162Scf00926g00027' => 'pax', 'Peaxi162Scf01064g00263' => 'pax', 'Peaxi162Scf01211g00135' => 'pax', 'PGR004G2336' => 'pgr', 'PGR042G0327' => 'pgr', 'PGR042G1957' => 'pgr', 'PGR042G2003' => 'pgr', 'PGR042G3929' => 'pgr', 'PGR083G1137' => 'pgr', 'PGR083G1364' => 'pgr', 'PGSC0003DMG400003381' => 'stu', 'PGSC0003DMG400003417' => 'stu', 'PGSC0003DMG400008981' => 'stu', 'PGSC0003DMG400012417' => 'stu', 'PGSC0003DMG400012823' => 'stu', 'PGSC0003DMG400016885' => 'stu', 'PGSC0003DMG400022812' => 'stu', 'PGSC0003DMG400029726' => 'stu', 'PGSC0003DMG401009243' => 'stu', 'PGSC0003DMG401031505' => 'stu', 'PGSC0003DMG402031505' => 'stu', 'Phvul.001G017600' => 'pvu', 'Phvul.002G193500' => 'pvu', 'Phvul.002G228900' => 'pvu', 'Phvul.002G236800' => 'pvu', 'Phvul.003G049500' => 'pvu', 'Phvul.005G072000' => 'pvu', 'Phvul.006G164800' => 'pvu', 'Phvul.006G185100' => 'pvu', 'Phvul.007G090000' => 'pvu', 'Potri.001G399800' => 'ptr', 'Potri.002G149900' => 'ptr', 'Potri.004G044100' => 'ptr', 'Potri.004G177600' => 'ptr', 'Potri.009G138000' => 'ptr', 'Potri.010G094000' => 'ptr', 'Potri.011G053000' => 'ptr', 'Potri.011G119300' => 'ptr', 'Potri.013G113700' => 'ptr', 'Potri.018G107800' => 'ptr', 'Potri.019G084100' => 'ptr', 'Pp3c14_23720' => 'ppa', 'Pp3c16_6340' => 'ppa', 'Pp3c23_13420' => 'ppa', 'Pp3c24_2740' => 'ppa', 'Pp3c25_860' => 'ppa', 'Pp3c8_21750' => 'ppa', 'Prupe.1G273000' => 'ppe', 'Prupe.1G273700' => 'ppe', 'Prupe.1G274100' => 'ppe', 'Prupe.2G023300' => 'ppe', 'Prupe.4G048000' => 'ppe', 'Prupe.4G080400' => 'ppe', 'Prupe.4G181200' => 'ppe', 'Prupe.8G056900' => 'ppe', 'Prupe.8G168700' => 'ppe', 'Psat1g189080' => 'psa', 'Psat1g204760' => 'psa', 'Psat4g175560' => 'psa', 'Psat4g177720' => 'psa', 'Psat5g244240' => 'psa', 'Psat6g010720' => 'psa', 'Psat6g187200' => 'psa', 'Psat7g072040' => 'psa', 'PSO017G3501' => 'pso', 'PSO063G2148' => 'pso', 'PSO063G5608' => 'pso', 'PSO210G6392' => 'pso', 'PSO541G2319' => 'pso', 'PSO541G2836' => 'pso', 'PSO541G4012' => 'pso', 'PSO541G6253' => 'pso', 'PSO675G0580' => 'pso', 'PSO675G0856' => 'pso', 'PSO675G5635' => 'pso', 'PSO675G9157' => 'pso', 'PSO832G1660' => 'pso', 'PSO832G1969' => 'pso', 'QL02p007186' => 'qlo', 'QL02p033904' => 'qlo', 'QL03p064391' => 'qlo', 'QL05p040593' => 'qlo', 'QL05p058242' => 'qlo', 'QL08p021825' => 'qlo', 'QL11p004981' => 'qlo', 'RcHm_v2.0_Chr1g0318301' => 'rch', 'RcHm_v2.0_Chr4g0418501' => 'rch', 'RcHm_v2.0_Chr4g0439971' => 'rch', 'RcHm_v2.0_Chr5g0008541' => 'rch', 'RcHm_v2.0_Chr5g0014101' => 'rch', 'RcHm_v2.0_Chr5g0014131' => 'rch', 'RcHm_v2.0_Chr5g0033621' => 'rch', 'RcHm_v2.0_Chr6g0272041' => 'rch', 'RcHm_v2.0_Chr6g0278831' => 'rch', 'Rhsim02G0130400' => 'rsi', 'Rhsim02G0171100' => 'rsi', 'Rhsim05G0053000' => 'rsi', 'Rhsim05G0053100' => 'rsi', 'Rhsim06G0096500' => 'rsi', 'Rhsim06G0096600' => 'rsi', 'Rhsim06G0199100' => 'rsi', 'Rhsim12G0062300' => 'rsi', 'Rhsim12G0062800' => 'rsi', 'Sabra02G0118600' => 'sbr', 'Sabra04G0027300' => 'sbr', 'Sabra04G0119500' => 'sbr', 'Sabra08G0112500' => 'sbr', 'Sabra11G0036800' => 'sbr', 'Sabra11G0103800' => 'sbr', 'Sabra13G0096300' => 'sbr', 'Sabra16G0262300' => 'sbr', 'Sabra18G0091700' => 'sbr', 'Sabra19G0095400' => 'sbr', 'SalBow6G3080' => 'sbo', 'SalBow7G1157' => 'sbo', 'SalBow7G2123' => 'sbo', 'SalBow7G2285' => 'sbo', 'SalBow7G3537' => 'sbo', 'SalBow8G2947' => 'sbo', 'SalBow8G4463' => 'sbo', 'SalBow8G5466' => 'sbo', 'Sc01g0001750' => 'sci', 'Sc02g0006640' => 'sci', 'Sc02g0006670' => 'sci', 'Sc04g0008220' => 'sci', 'Sc05g0006190' => 'sci', 'Sc08g0002760' => 'sci', 'Sc17g0006170' => 'sci', 'Sc22g0002050' => 'sci', 'Sc23g0001190' => 'sci', 'Sc24g0000980' => 'sci', 'Sed0006245' => 'sed', 'Sed0007543' => 'sed', 'Sed0009411' => 'sed', 'Sed0010765' => 'sed', 'Sed0012944' => 'sed', 'Sed0014682' => 'sed', 'Sed0016174' => 'sed', 'Sed0016796' => 'sed', 'Sed0020317' => 'sed', 'Sed0021467' => 'sed', 'SEGI_01316' => 'sgi', 'SEGI_03374' => 'sgi', 'SEGI_16265' => 'sgi', 'SEGI_18569' => 'sgi', 'SEGI_20351' => 'sgi', 'SEGI_26395' => 'sgi', 'SEGI_29469' => 'sgi', 'SEGI_34771' => 'sgi', 'SEGI_36769' => 'sgi', 'SEGI_37139' => 'sgi', 'SGA_v2.0_scaffold100G29687' => 'sas', 'SGA_v2.0_scaffold118G32472' => 'sas', 'SGA_v2.0_scaffold14G07051' => 'sas', 'SGA_v2.0_scaffold183G39845' => 'sas', 'SGA_v2.0_scaffold1G00174' => 'sas', 'SGA_v2.0_scaffold22G09714' => 'sas', 'SGA_v2.0_scaffold333G48992' => 'sas', 'SGA_v2.0_scaffold46G17491' => 'sas', 'SGA_v2.0_scaffold49G18294' => 'sas', 'SGA_v2.0_scaffold63G21658' => 'sas', 'SHI01741' => 'shi', 'SHI05771' => 'shi', 'SHI18077' => 'shi', 'SHI20525' => 'shi', 'SHI20527' => 'shi', 'SHI20528' => 'shi', 'SMO172G0185' => 'smo', 'SMO198G0020' => 'smo', 'SMO351G0006' => 'smo', 'SMO356G0118' => 'smo', 'SMO358G0296' => 'smo', 'SMO367G0079' => 'smo', 'SMO367G1277' => 'smo', 'Solyc01g014220.3' => 'sly', 'Solyc01g111770.2' => 'sly', 'Solyc02g078180.3' => 'sly', 'Solyc03g006430.3' => 'sly', 'Solyc03g006456.1' => 'sly', 'Solyc03g079860.2' => 'sly', 'Solyc04g079770.3' => 'sly', 'Solyc05g007430.4' => 'sly', 'Solyc07g063150.3' => 'sly', 'Solyc08g016620.3' => 'sly', 'Solyc09g057590.3' => 'sly', 'Solyc09g057600.1' => 'sly', 'Solyc10g009050.3' => 'sly', 'Solyc11g017420.2' => 'sly', 'Sopen01g053810' => 'spe', 'Sopen02g023040' => 'spe', 'Sopen03g002440' => 'spe', 'Sopen04g033350' => 'spe', 'Sopen05g003310' => 'spe', 'Sopen07g004050' => 'spe', 'Sopen07g031340' => 'spe', 'Sopen08g006990' => 'spe', 'Sopen10g004830' => 'spe', 'Sopen11g009370' => 'spe', 'Sp1g24450' => 'spa', 'Sp1g29670' => 'spa', 'Sp1g39600' => 'spa', 'Sp2g11080' => 'spa', 'Sp2g13970' => 'spa', 'Sp4g16130' => 'spa', 'Sp6g13080' => 'spa', 'Sp7g37270' => 'spa', 'TAR371G0065' => 'tar', 'TAR376G0340' => 'tar', 'TAR376G0435' => 'tar', 'TAR381G0002' => 'tar', 'TAR381G1236' => 'tar', 'TAR624G0055' => 'tar', 'TAR624G0324' => 'tar', 'TAR624G0696' => 'tar', 'TAR624G0906' => 'tar', 'TAR625G0107' => 'tar', 'TAR626G0015' => 'tar', 'TAR626G1356' => 'tar', 'TAR627G0888' => 'tar', 'TAR628G0399' => 'tar', 'TAR628G1327' => 'tar', 'TAR629G2831' => 'tar', 'TAR629G2874' => 'tar', 'TAR633G1432' => 'tar', 'TAR633G2771' => 'tar', 'THA.LOC104803394' => 'tha', 'THA.LOC104805153' => 'tha', 'THA.LOC104806784' => 'tha', 'THA.LOC104810473' => 'tha', 'THA.LOC104813100' => 'tha', 'THA.LOC104814215' => 'tha', 'THA.LOC104815554' => 'tha', 'THA.LOC104820544' => 'tha', 'THA.LOC104824754' => 'tha', 'THA.LOC104827717' => 'tha', 'Thecc.02G031400' => 'tca', 'Thecc.02G055900' => 'tca', 'Thecc.02G350800' => 'tca', 'Thecc.06G150900' => 'tca', 'Thecc.06G186600' => 'tca', 'Thecc.07G089600' => 'tca', 'Thecc.08G020400' => 'tca', 'Thecc.08G182100' => 'tca', 'Thhalv10000873m.g' => 'esa', 'Thhalv10004185m.g' => 'esa', 'Thhalv10006981m.g' => 'esa', 'Thhalv10007204m.g' => 'esa', 'Thhalv10011374m.g' => 'esa', 'Thhalv10013482m.g' => 'esa', 'Thhalv10017801m.g' => 'esa', 'Thhalv10024983m.g' => 'esa', 'TPR.G12072' => 'tpr', 'TPR.G15769' => 'tpr', 'TPR.G16504' => 'tpr', 'TPR.G16506' => 'tpr', 'TPR.G24345' => 'tpr', 'TPR.G26666' => 'tpr', 'TPR.G27320' => 'tpr', 'TPR.G31819' => 'tpr', 'TPR.G38879' => 'tpr', 'TPR.G39015' => 'tpr', 'TPR.G8819' => 'tpr', 'TWI09G0924' => 'twi', 'TWI12G0811' => 'twi', 'TWI12G1294' => 'twi', 'TWI31G0150' => 'twi', 'TWI36G1262' => 'twi', 'TWI38G1287' => 'twi', 'TWI38G1633' => 'twi', 'TWI38G1982' => 'twi', 'TWI39G0116' => 'twi', 'TWI60G1011' => 'twi', 'TWI63G0171' => 'twi', 'TWI73G0839' => 'twi', 'TWI79G1511' => 'twi', 'unitig_0.g915' => 'ugi', 'unitig_0.g916' => 'ugi', 'unitig_21.g20219' => 'ugi', 'unitig_21.g20416' => 'ugi', 'unitig_578.g16132' => 'ugi', 'unitig_578.g16718' => 'ugi', 'unitig_62.g23481' => 'ugi', 'unitig_744.g24535' => 'ugi', 'unitig_749.g13525' => 'ugi', 'vmacro01248' => 'vma', 'vmacro02290' => 'vma', 'vmacro10946' => 'vma', 'vmacro11865' => 'vma', 'vmacro12493' => 'vma', 'vmacro17322' => 'vma', 'vmacro21599' => 'vma', 'vmacro23041' => 'vma', 'VMungo0251G0004' => 'vmu', 'VMungo0251G2639' => 'vmu', 'VMungo0251G2967' => 'vmu', 'VMungo0540G0864' => 'vmu', 'VMungo0540G1569' => 'vmu', 'VMungo0647G0317' => 'vmu', 'VMungo0720G1373' => 'vmu', 'VMungo0720G1508' => 'vmu', 'VMungo1080G0485' => 'vmu', 'VMungo1215G3177' => 'vmu', 'Zm00001eb112600' => 'zma', 'Zm00001eb120220' => 'zma', 'Zm00001eb153240' => 'zma', 'Zm00001eb168880' => 'zma', 'Zm00001eb213920' => 'zma', 'Zm00001eb228280' => 'zma', 'Zm00001eb254580' => 'zma', 'Zm00001eb272180' => 'zma', 'Zm00001eb293190' => 'zma', 'Zm00001eb322930' => 'zma', 'Zm00001eb353360' => 'zma', 'Zm00001eb353390' => 'zma', 'Zm00001eb353430' => 'zma', 'Zm00001eb353440' => 'zma', 'Zm00001eb353780' => 'zma' ) $gf_id = 'HOM05D000499' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000499' ) $data_identifier = 'HOM05D000499' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 29, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 12, 'amhyb' => (int) 8, 'aly' => (int) 12, 'aox' => (int) 9, 'arhy' => (int) 26, 'ath' => (int) 8, 'atr' => (int) 7, 'acertr' => (int) 10, 'cqu' => (int) 15, 'bca' => (int) 29, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 11, 'cansat' => (int) 8, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 9, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 8, 'cpa' => (int) 10, 'csa' => (int) 7, 'camsi' => (int) 20, 'dca' => (int) 8, 'din' => (int) 12, 'dzi' => (int) 14, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 6, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 38, 'gra' => (int) 16, 'vvi' => (int) 8, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 5, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 11, 'lja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 11, 'mpo' => (int) 3, 'mbi' => (int) 14, 'mdo' => (int) 14, 'mtr' => (int) 8, 'cme' => (int) 9, 'egut' => (int) 9, 'ama' => (int) 11, 'nta' => (int) 17, 'nnu' => (int) 11, 'oeu' => (int) 18, 'osa' => (int) 8, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 6, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 9, 'rsi' => (int) 9, 'sbr' => (int) 10, 'sbo' => (int) 8, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 10, 'sas' => (int) 10, 'shi' => (int) 6, 'smo' => (int) 7, 'sly' => (int) 14, 'spe' => (int) 10, 'spa' => (int) 8, 'tar' => (int) 19, 'tha' => (int) 10, 'tca' => (int) 8, 'esa' => (int) 8, 'tpr' => (int) 11, 'twi' => (int) 13, 'ugi' => (int) 9, 'vma' => (int) 8, 'vmu' => (int) 10, 'zma' => (int) 15 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb353780' $species_info = array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ) $local_species = 'rch' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000499', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1066', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p29780' => 'bna', 'A02p33180' => 'bna', 'A03p16470' => 'bna', 'A03p66010' => 'bna', 'A04p25970' => 'bna', 'A06p01270' => 'bna', 'A06p46080' => 'bna', 'A07p11400' => 'bna', 'A08p01840' => 'bna', 'A08p08230' => 'bna', 'A08p25740' => 'bna', 'A09p32070' => 'bna', 'A09p37830' => 'bna', 'A09p42840' => 'bna', 'A09p42850' => 'bna', 'Aa31LG10G2060' => 'aar', 'Aa31LG2G7410' => 'aar', 'Aa31LG6G10200' => 'aar', 'Aa31LG6G16680' => 'aar', 'Aa31LG6G8470' => 'aar', 'Aa31LG9G12730' => 'aar', 'Aa31LG9G13680' => 'aar', 'Aa31LG9G14920' => 'aar', 'Aa31LG9G6650' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4977' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5467' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3254' => 'aag', 'Actinidia02578' => 'ach', 'Actinidia07693' => 'ach', 'Actinidia08413' => 'ach', 'Actinidia08414' => 'ach', 'Actinidia15289' => 'ach', 'Actinidia19871' => 'ach', 'Actinidia21475' => 'ach', 'Actinidia22576' => 'ach', 'Actinidia28327' => 'ach', 'Actinidia32491' => 'ach', 'Actinidia39463' => 'ach', 'Actinidia39571' => 'ach', 'Ah.01g013750' => 'amhyb', 'Ah.01g023210' => 'amhyb', 'Ah.04g164850' => 'amhyb', 'Ah.05g178060' => 'amhyb', 'Ah.07g204270' => 'amhyb', 'Ah.07g208480' => 'amhyb', 'Ah.09g237410' => 'amhyb', 'Ah.14g089460' => 'amhyb', 'AL1G41790' => 'aly', 'AL1G49050' => 'aly', 'AL1G53810' => 'aly', 'AL1G61400' => 'aly', 'AL4G18580' => 'aly', 'AL5G12510' => 'aly', 'AL5G12540' => 'aly', 'AL6G43230' => 'aly', 'AL7G10370' => 'aly', 'AL7G19250' => 'aly', 'AL8G12240' => 'aly', 'AL8G18540' => 'aly', 'Aqoxy1G02409' => 'aox', 'Aqoxy2G03993' => 'aox', 'Aqoxy3G03357' => 'aox', 'Aqoxy4G00785' => 'aox', 'Aqoxy5G02598' => 'aox', 'Aqoxy6G00132' => 'aox', 'Aqoxy7G01776' => 'aox', 'Aqoxy7G02316' => 'aox', 'Aqoxy7G03973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.12AFKW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B8730' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27IQR1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3F75VG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3RE0GA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41TCQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.527VTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FIR39' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5W8UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DA38EV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ63HS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H1I32C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HC27T5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4M8AP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7N3CZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9UVDZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LS1NQA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT1D4B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SKC4TM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCFV76' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF9Q1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQWD9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1ZM88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WE07RT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YCK7VH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJE6Q6' => 'arhy', 'AT1G28240' => 'ath', 'AT1G34550' => 'ath', 'AT1G53040' => 'ath', 'AT2G02910' => 'ath', 'AT4G09630' => 'ath', 'AT4G38500' => 'ath', 'AT5G42660' => 'ath', 'AT5G46220' => 'ath', 'ATR0152G026' => 'atr', 'ATR0564G343' => 'atr', 'ATR0706G151' => 'atr', 'ATR0733G207' => 'atr', 'ATR0751G234' => 'atr', 'ATR0807G048' => 'atr', 'ATR1091G084' => 'atr', 'Atru.chr10.1229' => 'acertr', 'Atru.chr10.1230' => 'acertr', 'Atru.chr10.1874' => 'acertr', 'Atru.chr11.1808' => 'acertr', 'Atru.chr13.1795' => 'acertr', 'Atru.chr13.570' => 'acertr', 'Atru.chr2.2608' => 'acertr', 'Atru.chr2.2609' => 'acertr', 'Atru.chr5.3428' => 'acertr', 'Atru.chr8.1171' => 'acertr', 'AUR62004651' => 'cqu', 'AUR62008675' => 'cqu', 'AUR62010014' => 'cqu', 'AUR62013004' => 'cqu', 'AUR62014825' => 'cqu', 'AUR62015015' => 'cqu', 'AUR62015151' => 'cqu', 'AUR62017020' => 'cqu', 'AUR62019422' => 'cqu', 'AUR62023570' => 'cqu', 'AUR62025571' => 'cqu', 'AUR62029098' => 'cqu', 'AUR62033863' => 'cqu', 'AUR62034296' => 'cqu', 'AUR62040075' => 'cqu', 'BcaB02g07334' => 'bca', 'BcaB02g10575' => 'bca', 'BcaB03g12119' => 'bca', 'BcaB03g12120' => 'bca', 'BcaB03g13945' => 'bca', 'BcaB04g17123' => 'bca', 'BcaB04g17867' => 'bca', 'BcaB04g19839' => 'bca', 'BcaB07g30317' => 'bca', 'BcaB07g32432' => 'bca', 'BcaB07g33362' => 'bca', 'BcaB08g36611' => 'bca', 'BcaC01g00028' => 'bca', 'BcaC01g01356' => 'bca', 'BcaC01g02034' => 'bca', 'BcaC01g06051' => 'bca', 'BcaC03g16839' => 'bca', 'BcaC03g17176' => 'bca', 'BcaC05g26829' => 'bca', 'BcaC06g31490' => 'bca', 'BcaC06g35344' => 'bca', 'BcaC06g36570' => 'bca', 'BcaC07g37537' => 'bca', 'BcaC08g43491' => 'bca', 'BcaC08g43773' => 'bca', 'BcaNung00234' => 'bca', 'BcaNung01982' => 'bca', 'BcaNung03707' => 'bca', 'BcaNung06454' => 'bca', 'BolC2t10762H' => 'bol', 'BolC2t11191H' => 'bol', 'BolC3t14322H' => 'bol', 'BolC3t19747H' => 'bol', 'BolC3t21425H' => 'bol', 'BolC4t27800H' => 'bol', 'BolC5t31423H' => 'bol', 'BolC6t35951H' => 'bol', 'BolC6t36282H' => 'bol', 'BolC7t40678H' => 'bol', 'BolC7t40679H' => 'bol', 'BolC7t42222H' => 'bol', 'BolC7t43492H' => 'bol', 'BolC7t46785H' => 'bol', 'BolC8t47853H' => 'bol', 'BolC9t56805H' => 'bol', 'BraA02t08000Z' => 'bra', 'BraA02t08341Z' => 'bra', 'BraA03t10936Z' => 'bra', 'BraA03t15657Z' => 'bra', 'BraA04t18100Z' => 'bra', 'BraA05t20523Z' => 'bra', 'BraA06t23353Z' => 'bra', 'BraA06t27473Z' => 'bra', 'BraA06t27769Z' => 'bra', 'BraA07t28928Z' => 'bra', 'BraA08t32236Z' => 'bra', 'BraA08t32841Z' => 'bra', 'BraA08t34524Z' => 'bra', 'BraA09t38742Z' => 'bra', 'BraA09t39295Z' => 'bra', 'C02p47180' => 'bna', 'C02p50990' => 'bna', 'C03p19360' => 'bna', 'C03p74950' => 'bna', 'C03p91000' => 'bna', 'C04p63260' => 'bna', 'C05p27050' => 'bna', 'C06p08750' => 'bna', 'C06p11490' => 'bna', 'C07p02820' => 'bna', 'C07p17180' => 'bna', 'C07p29440' => 'bna', 'C07p63730' => 'bna', 'C09p39260' => 'bna', 'CAN.G1164.34' => 'can', 'CAN.G1164.39' => 'can', 'CAN.G1530.3' => 'can', 'CAN.G162.61' => 'can', 'CAN.G176.6' => 'can', 'CAN.G289.49' => 'can', 'CAN.G370.21' => 'can', 'CAN.G370.22' => 'can', 'CAN.G371.117' => 'can', 'CAN.G58.37' => 'can', 'CAN.G588.98' => 'can', 'CANSAT21G2266' => 'cansat', 'CANSAT25G2799' => 'cansat', 'CANSAT35G0862' => 'cansat', 'CANSAT35G1704' => 'cansat', 'CANSAT35G1760' => 'cansat', 'CANSAT56G3971' => 'cansat', 'CANSAT56G4116' => 'cansat', 'CANSAT80G1259' => 'cansat', 'CARHR027730' => 'chi', 'CARHR033880' => 'chi', 'CARHR043270' => 'chi', 'CARHR145330' => 'chi', 'CARHR145340' => 'chi', 'CARHR175570' => 'chi', 'CARHR181570' => 'chi', 'CARHR258470' => 'chi', 'CARHR260490' => 'chi', 'CARHR294220' => 'chi', 'Carub.0001s2668' => 'cru', 'Carub.0001s3257' => 'cru', 'Carub.0001s4220' => 'cru', 'Carub.0005s0179' => 'cru', 'Carub.0006s2807' => 'cru', 'Carub.0007s0039' => 'cru', 'Carub.0008s0169' => 'cru', 'Carub.0008s0636' => 'cru', 'Ca_00338_v3' => 'car', 'Ca_00542_v3' => 'car', 'Ca_01844_v3' => 'car', 'Ca_10611_v3' => 'car', 'Ca_13326_v3' => 'car', 'Ca_17944_v3' => 'car', 'Ca_18546_v3' => 'car', 'Ca_24219_v3' => 'car', 'Ca_29972_v3' => 'car', 'CBR_g3681' => 'cbr', 'CBR_g40021' => 'cbr', 'Cc01_g08140' => 'ccan', 'Cc02_g13410' => 'ccan', 'Cc02_g37480' => 'ccan', 'Cc05_g12030' => 'ccan', 'Cc09_g03370' => 'ccan', 'Cc09_g10300' => 'ccan', 'Cc10_g03530' => 'ccan', 'Cc10_g11380' => 'ccan', 'CDE01G0176' => 'cde', 'CDE02G0675' => 'cde', 'CDE02G0942' => 'cde', 'CDE02G1153' => 'cde', 'CDE02G4177' => 'cde', 'CDE04G2117' => 'cde', 'CDE04G2736' => 'cde', 'CDE08G1161' => 'cde', 'CDE09G1238' => 'cde', 'Cfa000467' => 'cfa', 'Cfa000947' => 'cfa', 'Cfa004969' => 'cfa', 'Cfa005284' => 'cfa', 'Cfa008993' => 'cfa', 'Cfa018187' => 'cfa', 'Cfa018454' => 'cfa', 'Cfa020585' => 'cfa', 'Ciclev10000424m.g' => 'ccl', 'Ciclev10003605m.g' => 'ccl', 'Ciclev10007828m.g' => 'ccl', 'Ciclev10014620m.g' => 'ccl', 'Ciclev10015169m.g' => 'ccl', 'Ciclev10018291m.g' => 'ccl', 'Ciclev10028256m.g' => 'ccl', 'Ciclev10033822m.g' => 'ccl', 'CiPaw.05G060300' => 'cil', 'CiPaw.05G085000' => 'cil', 'CiPaw.06G083700' => 'cil', 'CiPaw.06G120300' => 'cil', 'CiPaw.09G060500' => 'cil', 'CiPaw.09G123800' => 'cil', 'CiPaw.11G169700' => 'cil', 'CiPaw.12G118300' => 'cil', 'CiPaw.15G071000' => 'cil', 'CiPaw.15G081900' => 'cil', 'ClCG01G024610' => 'cla', 'ClCG03G006070' => 'cla', 'ClCG05G019250' => 'cla', 'ClCG09G009500' => 'cla', 'ClCG11G008200' => 'cla', 'ClCG11G018080' => 'cla', 'COL.COLO4_17373' => 'col', 'COL.COLO4_22994' => 'col', 'COL.COLO4_26389' => 'col', 'COL.COLO4_27170' => 'col', 'COL.COLO4_31074' => 'col', 'COL.COLO4_31465' => 'col', 'COL.COLO4_36438' => 'col', 'COL.COLO4_36439' => 'col', 'Cpa.g.c38781' => 'cpa', 'Cpa.g.sc128.12' => 'cpa', 'Cpa.g.sc166.7' => 'cpa', 'Cpa.g.sc166.8' => 'cpa', 'Cpa.g.sc20.111' => 'cpa', 'Cpa.g.sc27.31' => 'cpa', 'Cpa.g.sc64.36' => 'cpa', 'Cpa.g.sc64.37' => 'cpa', 'Cpa.g.sc66.49' => 'cpa', 'Cpa.g.sc80.64' => 'cpa', 'CsaV3_1G012320' => 'csa', 'CsaV3_2G008480' => 'csa', 'CsaV3_2G033450' => 'csa', 'CsaV3_3G044830' => 'csa', 'CsaV3_4G033710' => 'csa', 'CsaV3_6G051730' => 'csa', 'CsaV3_7G025350' => 'csa', 'CSS0001067' => 'camsi', 'CSS0005996' => 'camsi', 'CSS0006590' => 'camsi', 'CSS0009673' => 'camsi', 'CSS0010201' => 'camsi', 'CSS0010549' => 'camsi', 'CSS0011364' => 'camsi', 'CSS0014473' => 'camsi', 'CSS0014961' => 'camsi', 'CSS0020191' => 'camsi', 'CSS0021165' => 'camsi', 'CSS0022306' => 'camsi', 'CSS0030591' => 'camsi', 'CSS0030696' => 'camsi', 'CSS0032653' => 'camsi', 'CSS0037487' => 'camsi', 'CSS0041102' => 'camsi', 'CSS0041261' => 'camsi', 'CSS0046246' => 'camsi', 'CSS0049256' => 'camsi', 'DCAR_004075' => 'dca', 'DCAR_011538' => 'dca', 'DCAR_019553' => 'dca', 'DCAR_020952' => 'dca', 'DCAR_021739' => 'dca', 'DCAR_027407' => 'dca', 'DCAR_027913' => 'dca', 'DCAR_028066' => 'dca', 'Dinv05899' => 'din', 'Dinv07563' => 'din', 'Dinv08010' => 'din', 'Dinv14125' => 'din', 'Dinv20172' => 'din', 'Dinv30743' => 'din', 'Dinv31229' => 'din', 'Dinv34162' => 'din', 'Dinv36028' => 'din', 'Dinv39368' => 'din', 'Dinv40565' => 'din', 'Dinv41706' => 'din', 'Duzib052G0089' => 'dzi', 'Duzib116G0641' => 'dzi', 'Duzib132G0069' => 'dzi', 'Duzib132G1219' => 'dzi', 'Duzib147G0278' => 'dzi', 'Duzib160G0480' => 'dzi', 'Duzib170G0661' => 'dzi', 'Duzib177G0591' => 'dzi', 'Duzib187G1353' => 'dzi', 'Duzib192G0858' => 'dzi', 'Duzib192G0883' => 'dzi', 'Duzib213G0506' => 'dzi', 'Duzib235G0289' => 'dzi', 'Duzib251G0422' => 'dzi', 'ECA232G3898' => 'eca', 'ECA233G5950' => 'eca', 'ECA234G1699' => 'eca', 'ECA234G2421' => 'eca', 'ECA236G0426' => 'eca', 'ECA236G4331' => 'eca', 'ECA248G2573' => 'eca', 'EL10Ac1g00077' => 'bvu', 'EL10Ac1g01746' => 'bvu', 'EL10Ac2g03464' => 'bvu', 'EL10Ac4g08176' => 'bvu', 'EL10Ac7g17521' => 'bvu', 'EL10Ac8g20386' => 'bvu', 'EL10Ac9g21343' => 'bvu', 'EL10Ac9g22688' => 'bvu', 'Eucgr.B03434' => 'egr', 'Eucgr.D00618' => 'egr', 'Eucgr.E02395' => 'egr', 'Eucgr.F01129' => 'egr', 'Eucgr.F02622' => 'egr', 'Eucgr.F04207' => 'egr', 'FAN01G0570' => 'fan', 'FAN03G3351' => 'fan', 'FAN06G3702' => 'fan', 'FAN07G2149' => 'fan', 'FAN10G3758' => 'fan', 'FAN11G1170' => 'fan', 'FAN11G2050' => 'fan', 'FAN11G2724' => 'fan', 'FAN12G1700' => 'fan', 'FAN12G2028' => 'fan', 'FAN15G1160' => 'fan', 'FAN15G3063' => 'fan', 'FAN16G2540' => 'fan', 'FAN16G3077' => 'fan', 'FAN16G3624' => 'fan', 'FAN17G0221' => 'fan', 'FAN20G2492' => 'fan', 'FAN20G2905' => 'fan', 'FAN21G0548' => 'fan', 'FAN21G1300' => 'fan', 'FAN22G0077' => 'fan', 'FAN22G1315' => 'fan', 'FAN24G1280' => 'fan', 'FAN24G1445' => 'fan', 'FAN24G3527' => 'fan', 'FAN25G0464' => 'fan', 'FAN25G2885' => 'fan', 'FAN25G3270' => 'fan', 'FAN27G1101' => 'fan', 'FAN27G2846' => 'fan', 'FAN27G3524' => 'fan', 'FvH4_2g11770' => 'fve', 'FvH4_2g15630' => 'fve', 'FvH4_3g05570' => 'fve', 'FvH4_3g09110' => 'fve', 'FvH4_3g19940' => 'fve', 'FvH4_4g04821' => 'fve', 'FvH4_4g31480' => 'fve', 'FvH4_7g01740' => 'fve', 'Glyma.05G130400' => 'gma', 'Glyma.05G156400' => 'gma', 'Glyma.07G197000' => 'gma', 'Glyma.08G085151' => 'gma', 'Glyma.08G114500' => 'gma', 'Glyma.08G300400' => 'gma', 'Glyma.10G215800' => 'gma', 'Glyma.12G224400' => 'gma', 'Glyma.13G179300' => 'gma', 'Glyma.13G218151' => 'gma', 'Glyma.13G238800' => 'gma', 'Glyma.13G276900' => 'gma', 'Glyma.14G078200' => 'gma', 'Glyma.15G074500' => 'gma', 'Glyma.15G094100' => 'gma', 'Glyma.17G247200' => 'gma', 'Glyma.18G120100' => 'gma', 'Glyma.20G176000' => 'gma', 'Gohir.A01G063600' => 'ghi', 'Gohir.A01G170301' => 'ghi', 'Gohir.A02G060500' => 'ghi', 'Gohir.A05G133850' => 'ghi', 'Gohir.A05G161400' => 'ghi', 'Gohir.A06G012900' => 'ghi', 'Gohir.A06G035901' => 'ghi', 'Gohir.A06G127100' => 'ghi', 'Gohir.A06G210500' => 'ghi', 'Gohir.A08G008650' => 'ghi', 'Gohir.A09G072700' => 'ghi', 'Gohir.A09G088301' => 'ghi', 'Gohir.A10G040600' => 'ghi', 'Gohir.A12G036300' => 'ghi', 'Gohir.A12G143350' => 'ghi', 'Gohir.A12G165500' => 'ghi', 'Gohir.A13G145700' => 'ghi', 'Gohir.D01G050000' => 'ghi', 'Gohir.D01G051366' => 'ghi', 'Gohir.D01G161350' => 'ghi', 'Gohir.D02G065900' => 'ghi', 'Gohir.D05G164200' => 'ghi', 'Gohir.D05G355500' => 'ghi', 'Gohir.D06G010400' => 'ghi', 'Gohir.D06G111250' => 'ghi', 'Gohir.D06G132000' => 'ghi', 'Gohir.D06G210500' => 'ghi', 'Gohir.D07G165675' => 'ghi', 'Gohir.D08G062240' => 'ghi', 'Gohir.D08G086101' => 'ghi', 'Gohir.D08G138060' => 'ghi', 'Gohir.D09G072300' => 'ghi', 'Gohir.D10G041400' => 'ghi', 'Gohir.D11G191020' => 'ghi', 'Gohir.D11G212066' => 'ghi', 'Gohir.D12G036300' => 'ghi', 'Gohir.D12G168600' => 'ghi', 'Gohir.D13G150600' => 'ghi', 'Gorai.001G057300' => 'gra', 'Gorai.002G069900' => 'gra', 'Gorai.002G200000' => 'gra', 'Gorai.003G067600' => 'gra', 'Gorai.005G074800' => 'gra', 'Gorai.006G087300' => 'gra', 'Gorai.008G037500' => 'gra', 'Gorai.008G181400' => 'gra', 'Gorai.009G169400' => 'gra', 'Gorai.009G387900' => 'gra', 'Gorai.010G013300' => 'gra', 'Gorai.010G153800' => 'gra', 'Gorai.010G255800' => 'gra', 'Gorai.011G043700' => 'gra', 'Gorai.011G198900' => 'gra', 'Gorai.013G168400' => 'gra', 'GSVIVG01005212001' => 'vvi', 'GSVIVG01006163001' => 'vvi', 'GSVIVG01009625001' => 'vvi', 'GSVIVG01014338001' => 'vvi', 'GSVIVG01020005001' => 'vvi', 'GSVIVG01021450001' => 'vvi', 'GSVIVG01023975001' => 'vvi', 'GSVIVG01034490001' => 'vvi', 'HanXRQChr04g0112071' => 'han', 'HanXRQChr05g0131151' => 'han', 'HanXRQChr09g0262371' => 'han', 'HanXRQChr09g0268401' => 'han', 'HanXRQChr10g0279241' => 'han', 'HanXRQChr10g0297961' => 'han', 'HanXRQChr11g0326231' => 'han', 'HanXRQChr11g0328471' => 'han', 'HanXRQChr16g0507941' => 'han', 'HanXRQChr17g0560211' => 'han', 'Haze_02108' => 'cav', 'Haze_02428' => 'cav', 'Haze_05593' => 'cav', 'Haze_06448' => 'cav', 'Haze_09427' => 'cav', 'Haze_12022' => 'cav', 'Haze_17612' => 'cav', 'Haze_17928' => 'cav', 'Hma1.2p1_0032F.1_g019250' => 'hma', 'Hma1.2p1_0163F.1_g072690' => 'hma', 'Hma1.2p1_0265F.1_g106710' => 'hma', 'Hma1.2p1_0286F.1_g113970' => 'hma', 'Hma1.2p1_0363F.1_g136640' => 'hma', 'Hma1.2p1_0584F.1_g183470' => 'hma', 'Hma1.2p1_0885F.1_g232570' => 'hma', 'HPP92_006022' => 'vpl', 'HPP92_007320' => 'vpl', 'HPP92_011521' => 'vpl', 'HPP92_019387' => 'vpl', 'HPP92_024038' => 'vpl', 'Hund05891' => 'sun', 'Hund06450' => 'sun', 'Hund12053' => 'sun', 'Hund16800' => 'sun', 'Hund21222' => 'sun', 'Hund22896' => 'sun', 'Hund23746' => 'sun', 'Hund27083' => 'sun', 'Lalb_Chr02g0141831' => 'lal', 'Lalb_Chr02g0141841' => 'lal', 'Lalb_Chr05g0220411' => 'lal', 'Lalb_Chr06g0162081' => 'lal', 'Lalb_Chr09g0327651' => 'lal', 'Lalb_Chr13g0295051' => 'lal', 'Lalb_Chr15g0086801' => 'lal', 'Lalb_Chr16g0383781' => 'lal', 'Lalb_Chr16g0383791' => 'lal', 'Lalb_Chr18g0055441' => 'lal', 'Lalb_Chr18g0059611' => 'lal', 'Lalb_Chr20g0109661' => 'lal', 'Lalb_Chr20g0109831' => 'lal', 'Lalb_Chr20g0121871' => 'lal', 'Lalb_Chr22g0355361' => 'lal', 'Lalb_Chr25g0286371' => 'lal', 'Lj1A1187G43' => 'lonja', 'Lj1A1205T50' => 'lonja', 'Lj1A800G33' => 'lonja', 'Lj1C1187T7' => 'lonja', 'Lj1C843T11' => 'lonja', 'Lj1g0010940' => 'lja', 'Lj2A288T69' => 'lonja', 'Lj3g0024276' => 'lja', 'Lj4A47T76' => 'lonja', 'Lj4g0005805' => 'lja', 'Lj4g0006097' => 'lja', 'Lj4g0008528' => 'lja', 'Lj4g0024907' => 'lja', 'Lj5g0012472' => 'lja', 'Lj5g0018648' => 'lja', 'Lj6C789G1' => 'lonja', 'Lj6g0004000' => 'lja', 'Lj7A292G67' => 'lonja', 'Lj7A292T64' => 'lonja', 'Lj9A400T58' => 'lonja', 'Lsat_1_v5_gn_1_126181' => 'lsa', 'Lsat_1_v5_gn_4_123041' => 'lsa', 'Lsat_1_v5_gn_4_133620' => 'lsa', 'Lsat_1_v5_gn_4_53221' => 'lsa', 'Lsat_1_v5_gn_4_71961' => 'lsa', 'Lsat_1_v5_gn_7_105241' => 'lsa', 'Lsat_1_v5_gn_7_21361' => 'lsa', 'Lsat_1_v5_gn_7_28860' => 'lsa', 'Lsat_1_v5_gn_7_31260' => 'lsa', 'Lsat_1_v5_gn_8_52801' => 'lsa', 'Manes.02G191400' => 'mes', 'Manes.03G110100' => 'mes', 'Manes.04G071100' => 'mes', 'Manes.05G100500' => 'mes', 'Manes.05G164700' => 'mes', 'Manes.15G087000' => 'mes', 'Manes.15G121500' => 'mes', 'Manes.16G028300' => 'mes', 'Manes.17G046100' => 'mes', 'Manes.17G069800' => 'mes', 'Manes.18G100500' => 'mes', 'Mapoly0002s0109' => 'mpo', 'Mapoly0024s0007' => 'mpo', 'Mapoly0089s0032' => 'mpo', 'MBI04_g42241_MAGBIO' => 'mbi', 'MBI05_g11988_MAGBIO' => 'mbi', 'MBI05_g35452_MAGBIO' => 'mbi', 'MBI07_g30179_MAGBIO' => 'mbi', 'MBI07_g35859_MAGBIO' => 'mbi', 'MBI07_g35860_MAGBIO' => 'mbi', 'MBI07_g37166_MAGBIO' => 'mbi', 'MBI08_g18172_MAGBIO' => 'mbi', 'MBI09_g08441_MAGBIO' => 'mbi', 'MBI13_g01676_MAGBIO' => 'mbi', 'MBI14_g42955_MAGBIO' => 'mbi', 'MBI16_g13161_MAGBIO' => 'mbi', 'MBI17_g27204_MAGBIO' => 'mbi', 'MBI19_g21595_MAGBIO' => 'mbi', 'MD00G1148400' => 'mdo', 'MD02G1301200' => 'mdo', 'MD03G1227800' => 'mdo', 'MD05G1041100' => 'mdo', 'MD05G1124800' => 'mdo', 'MD05G1284000' => 'mdo', 'MD05G1338800' => 'mdo', 'MD05G1338900' => 'mdo', 'MD07G1022800' => 'mdo', 'MD10G1047500' => 'mdo', 'MD10G1127500' => 'mdo', 'MD10G1262300' => 'mdo', 'MD10G1293800' => 'mdo', 'MD16G1074300' => 'mdo', 'Medtr1g021670' => 'mtr', 'Medtr1g096320' => 'mtr', 'Medtr2g013690' => 'mtr', 'Medtr2g019450' => 'mtr', 'Medtr2g085170' => 'mtr', 'Medtr4g088785' => 'mtr', 'Medtr8g055930' => 'mtr', 'Medtr8g085850' => 'mtr', 'MELO3C002605.2' => 'cme', 'MELO3C003891.2' => 'cme', 'MELO3C004012.2' => 'cme', 'MELO3C007134.2' => 'cme', 'MELO3C008118.2' => 'cme', 'MELO3C016700.2' => 'cme', 'MELO3C024127.2' => 'cme', 'MELO3C033361.2' => 'cme', 'MELO3C033362.2' => 'cme', 'Migut.C00430' => 'egut', 'Migut.C01246' => 'egut', 'Migut.E00101' => 'egut', 'Migut.H01486' => 'egut', 'Migut.H01939' => 'egut', 'Migut.K00360' => 'egut', 'Migut.M00910' => 'egut', 'Migut.M01139' => 'egut', 'Migut.N02677' => 'egut', 'MSTRG.13252' => 'ama', 'MSTRG.14701' => 'ama', 'MSTRG.1521' => 'ama', 'MSTRG.15884' => 'ama', 'MSTRG.16242' => 'ama', 'MSTRG.22285' => 'ama', 'MSTRG.22444' => 'ama', 'MSTRG.2349' => 'ama', 'MSTRG.26308' => 'ama', 'MSTRG.28296' => 'ama', 'MSTRG.9895' => 'ama', 'Nitab4.5_0000110g0060' => 'nta', 'Nitab4.5_0000420g0130' => 'nta', 'Nitab4.5_0000422g0030' => 'nta', 'Nitab4.5_0000560g0180' => 'nta', 'Nitab4.5_0000703g0100' => 'nta', 'Nitab4.5_0000786g0200' => 'nta', 'Nitab4.5_0001336g0020' => 'nta', 'Nitab4.5_0001796g0030' => 'nta', 'Nitab4.5_0003348g0060' => 'nta', 'Nitab4.5_0003698g0040' => 'nta', 'Nitab4.5_0003942g0090' => 'nta', 'Nitab4.5_0004775g0070' => 'nta', 'Nitab4.5_0004864g0030' => 'nta', 'Nitab4.5_0005615g0020' => 'nta', 'Nitab4.5_0009288g0030' => 'nta', 'Nitab4.5_0009341g0010' => 'nta', 'Nitab4.5_0009535g0010' => 'nta', 'Nn1g03995' => 'nnu', 'Nn1g04100' => 'nnu', 'Nn1g06530' => 'nnu', 'Nn3g16404' => 'nnu', 'Nn3g17212' => 'nnu', 'Nn3g20776' => 'nnu', 'Nn3g21923' => 'nnu', 'Nn5g27737' => 'nnu', 'Nn5g29461' => 'nnu', 'Nn7g38355' => 'nnu', 'Nn8g39873' => 'nnu', 'Oeu000548.2' => 'oeu', 'Oeu004672.1' => 'oeu', 'Oeu015605.2' => 'oeu', 'Oeu016092.1' => 'oeu', 'Oeu017879.3' => 'oeu', 'Oeu024910.1' => 'oeu', 'Oeu028965.1' => 'oeu', 'Oeu031269.1' => 'oeu', 'Oeu031270.1' => 'oeu', 'Oeu032535.1' => 'oeu', 'Oeu034151.1' => 'oeu', 'Oeu034152.1' => 'oeu', 'Oeu034588.2' => 'oeu', 'Oeu050846.1' => 'oeu', 'Oeu050849.2' => 'oeu', 'Oeu051063.2' => 'oeu', 'Oeu052368.1' => 'oeu', 'Oeu052370.1' => 'oeu', 'Os01g0210400' => 'osa', 'Os01g0304300' => 'osa', 'Os01g0749100' => 'osa', 'Os02g0745800' => 'osa', 'Os03g0769050' => 'osa', 'Os05g0531500' => 'osa', 'Os06g0724300' => 'osa', 'Os11g0198100' => 'osa', 'Peaxi162Scf00069g01425' => 'pax', 'Peaxi162Scf00280g00811' => 'pax', 'Peaxi162Scf00310g00615' => 'pax', 'Peaxi162Scf00362g00542' => 'pax', 'Peaxi162Scf00461g00310' => 'pax', 'Peaxi162Scf00530g00118' => 'pax', 'Peaxi162Scf00541g00057' => 'pax', 'Peaxi162Scf00661g00017' => 'pax', 'Peaxi162Scf00926g00027' => 'pax', 'Peaxi162Scf01064g00263' => 'pax', 'Peaxi162Scf01211g00135' => 'pax', 'PGR004G2336' => 'pgr', 'PGR042G0327' => 'pgr', 'PGR042G1957' => 'pgr', 'PGR042G2003' => 'pgr', 'PGR042G3929' => 'pgr', 'PGR083G1137' => 'pgr', 'PGR083G1364' => 'pgr', 'PGSC0003DMG400003381' => 'stu', 'PGSC0003DMG400003417' => 'stu', 'PGSC0003DMG400008981' => 'stu', 'PGSC0003DMG400012417' => 'stu', 'PGSC0003DMG400012823' => 'stu', 'PGSC0003DMG400016885' => 'stu', 'PGSC0003DMG400022812' => 'stu', 'PGSC0003DMG400029726' => 'stu', 'PGSC0003DMG401009243' => 'stu', 'PGSC0003DMG401031505' => 'stu', 'PGSC0003DMG402031505' => 'stu', 'Phvul.001G017600' => 'pvu', 'Phvul.002G193500' => 'pvu', 'Phvul.002G228900' => 'pvu', 'Phvul.002G236800' => 'pvu', 'Phvul.003G049500' => 'pvu', 'Phvul.005G072000' => 'pvu', 'Phvul.006G164800' => 'pvu', 'Phvul.006G185100' => 'pvu', 'Phvul.007G090000' => 'pvu', 'Potri.001G399800' => 'ptr', 'Potri.002G149900' => 'ptr', 'Potri.004G044100' => 'ptr', 'Potri.004G177600' => 'ptr', 'Potri.009G138000' => 'ptr', 'Potri.010G094000' => 'ptr', 'Potri.011G053000' => 'ptr', 'Potri.011G119300' => 'ptr', 'Potri.013G113700' => 'ptr', 'Potri.018G107800' => 'ptr', 'Potri.019G084100' => 'ptr', 'Pp3c14_23720' => 'ppa', 'Pp3c16_6340' => 'ppa', 'Pp3c23_13420' => 'ppa', 'Pp3c24_2740' => 'ppa', 'Pp3c25_860' => 'ppa', 'Pp3c8_21750' => 'ppa', 'Prupe.1G273000' => 'ppe', 'Prupe.1G273700' => 'ppe', 'Prupe.1G274100' => 'ppe', 'Prupe.2G023300' => 'ppe', 'Prupe.4G048000' => 'ppe', 'Prupe.4G080400' => 'ppe', 'Prupe.4G181200' => 'ppe', 'Prupe.8G056900' => 'ppe', 'Prupe.8G168700' => 'ppe', 'Psat1g189080' => 'psa', 'Psat1g204760' => 'psa', 'Psat4g175560' => 'psa', 'Psat4g177720' => 'psa', 'Psat5g244240' => 'psa', 'Psat6g010720' => 'psa', 'Psat6g187200' => 'psa', 'Psat7g072040' => 'psa', 'PSO017G3501' => 'pso', 'PSO063G2148' => 'pso', 'PSO063G5608' => 'pso', 'PSO210G6392' => 'pso', 'PSO541G2319' => 'pso', 'PSO541G2836' => 'pso', 'PSO541G4012' => 'pso', 'PSO541G6253' => 'pso', 'PSO675G0580' => 'pso', 'PSO675G0856' => 'pso', 'PSO675G5635' => 'pso', 'PSO675G9157' => 'pso', 'PSO832G1660' => 'pso', 'PSO832G1969' => 'pso', 'QL02p007186' => 'qlo', 'QL02p033904' => 'qlo', 'QL03p064391' => 'qlo', 'QL05p040593' => 'qlo', 'QL05p058242' => 'qlo', 'QL08p021825' => 'qlo', 'QL11p004981' => 'qlo', 'RcHm_v2.0_Chr1g0318301' => 'rch', 'RcHm_v2.0_Chr4g0418501' => 'rch', 'RcHm_v2.0_Chr4g0439971' => 'rch', 'RcHm_v2.0_Chr5g0008541' => 'rch', 'RcHm_v2.0_Chr5g0014101' => 'rch', 'RcHm_v2.0_Chr5g0014131' => 'rch', 'RcHm_v2.0_Chr5g0033621' => 'rch', 'RcHm_v2.0_Chr6g0272041' => 'rch', 'RcHm_v2.0_Chr6g0278831' => 'rch', 'Rhsim02G0130400' => 'rsi', 'Rhsim02G0171100' => 'rsi', 'Rhsim05G0053000' => 'rsi', 'Rhsim05G0053100' => 'rsi', 'Rhsim06G0096500' => 'rsi', 'Rhsim06G0096600' => 'rsi', 'Rhsim06G0199100' => 'rsi', 'Rhsim12G0062300' => 'rsi', 'Rhsim12G0062800' => 'rsi', 'Sabra02G0118600' => 'sbr', 'Sabra04G0027300' => 'sbr', 'Sabra04G0119500' => 'sbr', 'Sabra08G0112500' => 'sbr', 'Sabra11G0036800' => 'sbr', 'Sabra11G0103800' => 'sbr', 'Sabra13G0096300' => 'sbr', 'Sabra16G0262300' => 'sbr', 'Sabra18G0091700' => 'sbr', 'Sabra19G0095400' => 'sbr', 'SalBow6G3080' => 'sbo', 'SalBow7G1157' => 'sbo', 'SalBow7G2123' => 'sbo', 'SalBow7G2285' => 'sbo', 'SalBow7G3537' => 'sbo', 'SalBow8G2947' => 'sbo', 'SalBow8G4463' => 'sbo', 'SalBow8G5466' => 'sbo', 'Sc01g0001750' => 'sci', 'Sc02g0006640' => 'sci', 'Sc02g0006670' => 'sci', 'Sc04g0008220' => 'sci', 'Sc05g0006190' => 'sci', 'Sc08g0002760' => 'sci', 'Sc17g0006170' => 'sci', 'Sc22g0002050' => 'sci', 'Sc23g0001190' => 'sci', 'Sc24g0000980' => 'sci', 'Sed0006245' => 'sed', 'Sed0007543' => 'sed', 'Sed0009411' => 'sed', 'Sed0010765' => 'sed', 'Sed0012944' => 'sed', 'Sed0014682' => 'sed', 'Sed0016174' => 'sed', 'Sed0016796' => 'sed', 'Sed0020317' => 'sed', 'Sed0021467' => 'sed', 'SEGI_01316' => 'sgi', 'SEGI_03374' => 'sgi', 'SEGI_16265' => 'sgi', 'SEGI_18569' => 'sgi', 'SEGI_20351' => 'sgi', 'SEGI_26395' => 'sgi', 'SEGI_29469' => 'sgi', 'SEGI_34771' => 'sgi', 'SEGI_36769' => 'sgi', 'SEGI_37139' => 'sgi', 'SGA_v2.0_scaffold100G29687' => 'sas', 'SGA_v2.0_scaffold118G32472' => 'sas', 'SGA_v2.0_scaffold14G07051' => 'sas', 'SGA_v2.0_scaffold183G39845' => 'sas', 'SGA_v2.0_scaffold1G00174' => 'sas', 'SGA_v2.0_scaffold22G09714' => 'sas', 'SGA_v2.0_scaffold333G48992' => 'sas', 'SGA_v2.0_scaffold46G17491' => 'sas', 'SGA_v2.0_scaffold49G18294' => 'sas', 'SGA_v2.0_scaffold63G21658' => 'sas', 'SHI01741' => 'shi', 'SHI05771' => 'shi', 'SHI18077' => 'shi', 'SHI20525' => 'shi', 'SHI20527' => 'shi', 'SHI20528' => 'shi', 'SMO172G0185' => 'smo', 'SMO198G0020' => 'smo', 'SMO351G0006' => 'smo', 'SMO356G0118' => 'smo', 'SMO358G0296' => 'smo', 'SMO367G0079' => 'smo', 'SMO367G1277' => 'smo', 'Solyc01g014220.3' => 'sly', 'Solyc01g111770.2' => 'sly', 'Solyc02g078180.3' => 'sly', 'Solyc03g006430.3' => 'sly', 'Solyc03g006456.1' => 'sly', 'Solyc03g079860.2' => 'sly', 'Solyc04g079770.3' => 'sly', 'Solyc05g007430.4' => 'sly', 'Solyc07g063150.3' => 'sly', 'Solyc08g016620.3' => 'sly', 'Solyc09g057590.3' => 'sly', 'Solyc09g057600.1' => 'sly', 'Solyc10g009050.3' => 'sly', 'Solyc11g017420.2' => 'sly', 'Sopen01g053810' => 'spe', 'Sopen02g023040' => 'spe', 'Sopen03g002440' => 'spe', 'Sopen04g033350' => 'spe', 'Sopen05g003310' => 'spe', 'Sopen07g004050' => 'spe', 'Sopen07g031340' => 'spe', 'Sopen08g006990' => 'spe', 'Sopen10g004830' => 'spe', 'Sopen11g009370' => 'spe', 'Sp1g24450' => 'spa', 'Sp1g29670' => 'spa', 'Sp1g39600' => 'spa', 'Sp2g11080' => 'spa', 'Sp2g13970' => 'spa', 'Sp4g16130' => 'spa', 'Sp6g13080' => 'spa', 'Sp7g37270' => 'spa', 'TAR371G0065' => 'tar', 'TAR376G0340' => 'tar', 'TAR376G0435' => 'tar', 'TAR381G0002' => 'tar', 'TAR381G1236' => 'tar', 'TAR624G0055' => 'tar', 'TAR624G0324' => 'tar', 'TAR624G0696' => 'tar', 'TAR624G0906' => 'tar', 'TAR625G0107' => 'tar', 'TAR626G0015' => 'tar', 'TAR626G1356' => 'tar', 'TAR627G0888' => 'tar', 'TAR628G0399' => 'tar', 'TAR628G1327' => 'tar', 'TAR629G2831' => 'tar', 'TAR629G2874' => 'tar', 'TAR633G1432' => 'tar', 'TAR633G2771' => 'tar', 'THA.LOC104803394' => 'tha', 'THA.LOC104805153' => 'tha', 'THA.LOC104806784' => 'tha', 'THA.LOC104810473' => 'tha', 'THA.LOC104813100' => 'tha', 'THA.LOC104814215' => 'tha', 'THA.LOC104815554' => 'tha', 'THA.LOC104820544' => 'tha', 'THA.LOC104824754' => 'tha', 'THA.LOC104827717' => 'tha', 'Thecc.02G031400' => 'tca', 'Thecc.02G055900' => 'tca', 'Thecc.02G350800' => 'tca', 'Thecc.06G150900' => 'tca', 'Thecc.06G186600' => 'tca', 'Thecc.07G089600' => 'tca', 'Thecc.08G020400' => 'tca', 'Thecc.08G182100' => 'tca', 'Thhalv10000873m.g' => 'esa', 'Thhalv10004185m.g' => 'esa', 'Thhalv10006981m.g' => 'esa', 'Thhalv10007204m.g' => 'esa', 'Thhalv10011374m.g' => 'esa', 'Thhalv10013482m.g' => 'esa', 'Thhalv10017801m.g' => 'esa', 'Thhalv10024983m.g' => 'esa', 'TPR.G12072' => 'tpr', 'TPR.G15769' => 'tpr', 'TPR.G16504' => 'tpr', 'TPR.G16506' => 'tpr', 'TPR.G24345' => 'tpr', 'TPR.G26666' => 'tpr', 'TPR.G27320' => 'tpr', 'TPR.G31819' => 'tpr', 'TPR.G38879' => 'tpr', 'TPR.G39015' => 'tpr', 'TPR.G8819' => 'tpr', 'TWI09G0924' => 'twi', 'TWI12G0811' => 'twi', 'TWI12G1294' => 'twi', 'TWI31G0150' => 'twi', 'TWI36G1262' => 'twi', 'TWI38G1287' => 'twi', 'TWI38G1633' => 'twi', 'TWI38G1982' => 'twi', 'TWI39G0116' => 'twi', 'TWI60G1011' => 'twi', 'TWI63G0171' => 'twi', 'TWI73G0839' => 'twi', 'TWI79G1511' => 'twi', 'unitig_0.g915' => 'ugi', 'unitig_0.g916' => 'ugi', 'unitig_21.g20219' => 'ugi', 'unitig_21.g20416' => 'ugi', 'unitig_578.g16132' => 'ugi', 'unitig_578.g16718' => 'ugi', 'unitig_62.g23481' => 'ugi', 'unitig_744.g24535' => 'ugi', 'unitig_749.g13525' => 'ugi', 'vmacro01248' => 'vma', 'vmacro02290' => 'vma', 'vmacro10946' => 'vma', 'vmacro11865' => 'vma', 'vmacro12493' => 'vma', 'vmacro17322' => 'vma', 'vmacro21599' => 'vma', 'vmacro23041' => 'vma', 'VMungo0251G0004' => 'vmu', 'VMungo0251G2639' => 'vmu', 'VMungo0251G2967' => 'vmu', 'VMungo0540G0864' => 'vmu', 'VMungo0540G1569' => 'vmu', 'VMungo0647G0317' => 'vmu', 'VMungo0720G1373' => 'vmu', 'VMungo0720G1508' => 'vmu', 'VMungo1080G0485' => 'vmu', 'VMungo1215G3177' => 'vmu', 'Zm00001eb112600' => 'zma', 'Zm00001eb120220' => 'zma', 'Zm00001eb153240' => 'zma', 'Zm00001eb168880' => 'zma', 'Zm00001eb213920' => 'zma', 'Zm00001eb228280' => 'zma', 'Zm00001eb254580' => 'zma', 'Zm00001eb272180' => 'zma', 'Zm00001eb293190' => 'zma', 'Zm00001eb322930' => 'zma', 'Zm00001eb353360' => 'zma', 'Zm00001eb353390' => 'zma', 'Zm00001eb353430' => 'zma', 'Zm00001eb353440' => 'zma', 'Zm00001eb353780' => 'zma' ), 'gf_id' => 'HOM05D000499', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000499' ), 'data_identifier' => 'HOM05D000499', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000499', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1066', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p29780' => 'bna', 'A02p33180' => 'bna', 'A03p16470' => 'bna', 'A03p66010' => 'bna', 'A04p25970' => 'bna', 'A06p01270' => 'bna', 'A06p46080' => 'bna', 'A07p11400' => 'bna', 'A08p01840' => 'bna', 'A08p08230' => 'bna', 'A08p25740' => 'bna', 'A09p32070' => 'bna', 'A09p37830' => 'bna', 'A09p42840' => 'bna', 'A09p42850' => 'bna', 'Aa31LG10G2060' => 'aar', 'Aa31LG2G7410' => 'aar', 'Aa31LG6G10200' => 'aar', 'Aa31LG6G16680' => 'aar', 'Aa31LG6G8470' => 'aar', 'Aa31LG9G12730' => 'aar', 'Aa31LG9G13680' => 'aar', 'Aa31LG9G14920' => 'aar', 'Aa31LG9G6650' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4977' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5467' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3254' => 'aag', 'Actinidia02578' => 'ach', 'Actinidia07693' => 'ach', 'Actinidia08413' => 'ach', 'Actinidia08414' => 'ach', 'Actinidia15289' => 'ach', 'Actinidia19871' => 'ach', 'Actinidia21475' => 'ach', 'Actinidia22576' => 'ach', 'Actinidia28327' => 'ach', 'Actinidia32491' => 'ach', 'Actinidia39463' => 'ach', 'Actinidia39571' => 'ach', 'Ah.01g013750' => 'amhyb', 'Ah.01g023210' => 'amhyb', 'Ah.04g164850' => 'amhyb', 'Ah.05g178060' => 'amhyb', 'Ah.07g204270' => 'amhyb', 'Ah.07g208480' => 'amhyb', 'Ah.09g237410' => 'amhyb', 'Ah.14g089460' => 'amhyb', 'AL1G41790' => 'aly', 'AL1G49050' => 'aly', 'AL1G53810' => 'aly', 'AL1G61400' => 'aly', 'AL4G18580' => 'aly', 'AL5G12510' => 'aly', 'AL5G12540' => 'aly', 'AL6G43230' => 'aly', 'AL7G10370' => 'aly', 'AL7G19250' => 'aly', 'AL8G12240' => 'aly', 'AL8G18540' => 'aly', 'Aqoxy1G02409' => 'aox', 'Aqoxy2G03993' => 'aox', 'Aqoxy3G03357' => 'aox', 'Aqoxy4G00785' => 'aox', 'Aqoxy5G02598' => 'aox', 'Aqoxy6G00132' => 'aox', 'Aqoxy7G01776' => 'aox', 'Aqoxy7G02316' => 'aox', 'Aqoxy7G03973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.12AFKW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B8730' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27IQR1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3F75VG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3RE0GA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41TCQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.527VTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FIR39' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5W8UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DA38EV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ63HS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H1I32C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HC27T5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4M8AP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7N3CZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9UVDZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LS1NQA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT1D4B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SKC4TM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCFV76' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF9Q1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQWD9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1ZM88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WE07RT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YCK7VH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJE6Q6' => 'arhy', 'AT1G28240' => 'ath', 'AT1G34550' => 'ath', 'AT1G53040' => 'ath', 'AT2G02910' => 'ath', 'AT4G09630' => 'ath', 'AT4G38500' => 'ath', 'AT5G42660' => 'ath', 'AT5G46220' => 'ath', 'ATR0152G026' => 'atr', 'ATR0564G343' => 'atr', 'ATR0706G151' => 'atr', 'ATR0733G207' => 'atr', 'ATR0751G234' => 'atr', 'ATR0807G048' => 'atr', 'ATR1091G084' => 'atr', 'Atru.chr10.1229' => 'acertr', 'Atru.chr10.1230' => 'acertr', 'Atru.chr10.1874' => 'acertr', 'Atru.chr11.1808' => 'acertr', 'Atru.chr13.1795' => 'acertr', 'Atru.chr13.570' => 'acertr', 'Atru.chr2.2608' => 'acertr', 'Atru.chr2.2609' => 'acertr', 'Atru.chr5.3428' => 'acertr', 'Atru.chr8.1171' => 'acertr', 'AUR62004651' => 'cqu', 'AUR62008675' => 'cqu', 'AUR62010014' => 'cqu', 'AUR62013004' => 'cqu', 'AUR62014825' => 'cqu', 'AUR62015015' => 'cqu', 'AUR62015151' => 'cqu', 'AUR62017020' => 'cqu', 'AUR62019422' => 'cqu', 'AUR62023570' => 'cqu', 'AUR62025571' => 'cqu', 'AUR62029098' => 'cqu', 'AUR62033863' => 'cqu', 'AUR62034296' => 'cqu', 'AUR62040075' => 'cqu', 'BcaB02g07334' => 'bca', 'BcaB02g10575' => 'bca', 'BcaB03g12119' => 'bca', 'BcaB03g12120' => 'bca', 'BcaB03g13945' => 'bca', 'BcaB04g17123' => 'bca', 'BcaB04g17867' => 'bca', 'BcaB04g19839' => 'bca', 'BcaB07g30317' => 'bca', 'BcaB07g32432' => 'bca', 'BcaB07g33362' => 'bca', 'BcaB08g36611' => 'bca', 'BcaC01g00028' => 'bca', 'BcaC01g01356' => 'bca', 'BcaC01g02034' => 'bca', 'BcaC01g06051' => 'bca', 'BcaC03g16839' => 'bca', 'BcaC03g17176' => 'bca', 'BcaC05g26829' => 'bca', 'BcaC06g31490' => 'bca', 'BcaC06g35344' => 'bca', 'BcaC06g36570' => 'bca', 'BcaC07g37537' => 'bca', 'BcaC08g43491' => 'bca', 'BcaC08g43773' => 'bca', 'BcaNung00234' => 'bca', 'BcaNung01982' => 'bca', 'BcaNung03707' => 'bca', 'BcaNung06454' => 'bca', 'BolC2t10762H' => 'bol', 'BolC2t11191H' => 'bol', 'BolC3t14322H' => 'bol', 'BolC3t19747H' => 'bol', 'BolC3t21425H' => 'bol', 'BolC4t27800H' => 'bol', 'BolC5t31423H' => 'bol', 'BolC6t35951H' => 'bol', 'BolC6t36282H' => 'bol', 'BolC7t40678H' => 'bol', 'BolC7t40679H' => 'bol', 'BolC7t42222H' => 'bol', 'BolC7t43492H' => 'bol', 'BolC7t46785H' => 'bol', 'BolC8t47853H' => 'bol', 'BolC9t56805H' => 'bol', 'BraA02t08000Z' => 'bra', 'BraA02t08341Z' => 'bra', 'BraA03t10936Z' => 'bra', 'BraA03t15657Z' => 'bra', 'BraA04t18100Z' => 'bra', 'BraA05t20523Z' => 'bra', 'BraA06t23353Z' => 'bra', 'BraA06t27473Z' => 'bra', 'BraA06t27769Z' => 'bra', 'BraA07t28928Z' => 'bra', 'BraA08t32236Z' => 'bra', 'BraA08t32841Z' => 'bra', 'BraA08t34524Z' => 'bra', 'BraA09t38742Z' => 'bra', 'BraA09t39295Z' => 'bra', 'C02p47180' => 'bna', 'C02p50990' => 'bna', 'C03p19360' => 'bna', 'C03p74950' => 'bna', 'C03p91000' => 'bna', 'C04p63260' => 'bna', 'C05p27050' => 'bna', 'C06p08750' => 'bna', 'C06p11490' => 'bna', 'C07p02820' => 'bna', 'C07p17180' => 'bna', 'C07p29440' => 'bna', 'C07p63730' => 'bna', 'C09p39260' => 'bna', 'CAN.G1164.34' => 'can', 'CAN.G1164.39' => 'can', 'CAN.G1530.3' => 'can', 'CAN.G162.61' => 'can', 'CAN.G176.6' => 'can', 'CAN.G289.49' => 'can', 'CAN.G370.21' => 'can', 'CAN.G370.22' => 'can', 'CAN.G371.117' => 'can', 'CAN.G58.37' => 'can', 'CAN.G588.98' => 'can', 'CANSAT21G2266' => 'cansat', 'CANSAT25G2799' => 'cansat', 'CANSAT35G0862' => 'cansat', 'CANSAT35G1704' => 'cansat', 'CANSAT35G1760' => 'cansat', 'CANSAT56G3971' => 'cansat', 'CANSAT56G4116' => 'cansat', 'CANSAT80G1259' => 'cansat', 'CARHR027730' => 'chi', 'CARHR033880' => 'chi', 'CARHR043270' => 'chi', 'CARHR145330' => 'chi', 'CARHR145340' => 'chi', 'CARHR175570' => 'chi', 'CARHR181570' => 'chi', 'CARHR258470' => 'chi', 'CARHR260490' => 'chi', 'CARHR294220' => 'chi', 'Carub.0001s2668' => 'cru', 'Carub.0001s3257' => 'cru', 'Carub.0001s4220' => 'cru', 'Carub.0005s0179' => 'cru', 'Carub.0006s2807' => 'cru', 'Carub.0007s0039' => 'cru', 'Carub.0008s0169' => 'cru', 'Carub.0008s0636' => 'cru', 'Ca_00338_v3' => 'car', 'Ca_00542_v3' => 'car', 'Ca_01844_v3' => 'car', 'Ca_10611_v3' => 'car', 'Ca_13326_v3' => 'car', 'Ca_17944_v3' => 'car', 'Ca_18546_v3' => 'car', 'Ca_24219_v3' => 'car', 'Ca_29972_v3' => 'car', 'CBR_g3681' => 'cbr', 'CBR_g40021' => 'cbr', 'Cc01_g08140' => 'ccan', 'Cc02_g13410' => 'ccan', 'Cc02_g37480' => 'ccan', 'Cc05_g12030' => 'ccan', 'Cc09_g03370' => 'ccan', 'Cc09_g10300' => 'ccan', 'Cc10_g03530' => 'ccan', 'Cc10_g11380' => 'ccan', 'CDE01G0176' => 'cde', 'CDE02G0675' => 'cde', 'CDE02G0942' => 'cde', 'CDE02G1153' => 'cde', 'CDE02G4177' => 'cde', 'CDE04G2117' => 'cde', 'CDE04G2736' => 'cde', 'CDE08G1161' => 'cde', 'CDE09G1238' => 'cde', 'Cfa000467' => 'cfa', 'Cfa000947' => 'cfa', 'Cfa004969' => 'cfa', 'Cfa005284' => 'cfa', 'Cfa008993' => 'cfa', 'Cfa018187' => 'cfa', 'Cfa018454' => 'cfa', 'Cfa020585' => 'cfa', 'Ciclev10000424m.g' => 'ccl', 'Ciclev10003605m.g' => 'ccl', 'Ciclev10007828m.g' => 'ccl', 'Ciclev10014620m.g' => 'ccl', 'Ciclev10015169m.g' => 'ccl', 'Ciclev10018291m.g' => 'ccl', 'Ciclev10028256m.g' => 'ccl', 'Ciclev10033822m.g' => 'ccl', 'CiPaw.05G060300' => 'cil', 'CiPaw.05G085000' => 'cil', 'CiPaw.06G083700' => 'cil', 'CiPaw.06G120300' => 'cil', 'CiPaw.09G060500' => 'cil', 'CiPaw.09G123800' => 'cil', 'CiPaw.11G169700' => 'cil', 'CiPaw.12G118300' => 'cil', 'CiPaw.15G071000' => 'cil', 'CiPaw.15G081900' => 'cil', 'ClCG01G024610' => 'cla', 'ClCG03G006070' => 'cla', 'ClCG05G019250' => 'cla', 'ClCG09G009500' => 'cla', 'ClCG11G008200' => 'cla', 'ClCG11G018080' => 'cla', 'COL.COLO4_17373' => 'col', 'COL.COLO4_22994' => 'col', 'COL.COLO4_26389' => 'col', 'COL.COLO4_27170' => 'col', 'COL.COLO4_31074' => 'col', 'COL.COLO4_31465' => 'col', 'COL.COLO4_36438' => 'col', 'COL.COLO4_36439' => 'col', 'Cpa.g.c38781' => 'cpa', 'Cpa.g.sc128.12' => 'cpa', 'Cpa.g.sc166.7' => 'cpa', 'Cpa.g.sc166.8' => 'cpa', 'Cpa.g.sc20.111' => 'cpa', 'Cpa.g.sc27.31' => 'cpa', 'Cpa.g.sc64.36' => 'cpa', 'Cpa.g.sc64.37' => 'cpa', 'Cpa.g.sc66.49' => 'cpa', 'Cpa.g.sc80.64' => 'cpa', 'CsaV3_1G012320' => 'csa', 'CsaV3_2G008480' => 'csa', 'CsaV3_2G033450' => 'csa', 'CsaV3_3G044830' => 'csa', 'CsaV3_4G033710' => 'csa', 'CsaV3_6G051730' => 'csa', 'CsaV3_7G025350' => 'csa', 'CSS0001067' => 'camsi', 'CSS0005996' => 'camsi', 'CSS0006590' => 'camsi', 'CSS0009673' => 'camsi', 'CSS0010201' => 'camsi', 'CSS0010549' => 'camsi', 'CSS0011364' => 'camsi', 'CSS0014473' => 'camsi', 'CSS0014961' => 'camsi', 'CSS0020191' => 'camsi', 'CSS0021165' => 'camsi', 'CSS0022306' => 'camsi', 'CSS0030591' => 'camsi', 'CSS0030696' => 'camsi', 'CSS0032653' => 'camsi', 'CSS0037487' => 'camsi', 'CSS0041102' => 'camsi', 'CSS0041261' => 'camsi', 'CSS0046246' => 'camsi', 'CSS0049256' => 'camsi', 'DCAR_004075' => 'dca', 'DCAR_011538' => 'dca', 'DCAR_019553' => 'dca', 'DCAR_020952' => 'dca', 'DCAR_021739' => 'dca', 'DCAR_027407' => 'dca', 'DCAR_027913' => 'dca', 'DCAR_028066' => 'dca', 'Dinv05899' => 'din', 'Dinv07563' => 'din', 'Dinv08010' => 'din', 'Dinv14125' => 'din', 'Dinv20172' => 'din', 'Dinv30743' => 'din', 'Dinv31229' => 'din', 'Dinv34162' => 'din', 'Dinv36028' => 'din', 'Dinv39368' => 'din', 'Dinv40565' => 'din', 'Dinv41706' => 'din', 'Duzib052G0089' => 'dzi', 'Duzib116G0641' => 'dzi', 'Duzib132G0069' => 'dzi', 'Duzib132G1219' => 'dzi', 'Duzib147G0278' => 'dzi', 'Duzib160G0480' => 'dzi', 'Duzib170G0661' => 'dzi', 'Duzib177G0591' => 'dzi', 'Duzib187G1353' => 'dzi', 'Duzib192G0858' => 'dzi', 'Duzib192G0883' => 'dzi', 'Duzib213G0506' => 'dzi', 'Duzib235G0289' => 'dzi', 'Duzib251G0422' => 'dzi', 'ECA232G3898' => 'eca', 'ECA233G5950' => 'eca', 'ECA234G1699' => 'eca', 'ECA234G2421' => 'eca', 'ECA236G0426' => 'eca', 'ECA236G4331' => 'eca', 'ECA248G2573' => 'eca', 'EL10Ac1g00077' => 'bvu', 'EL10Ac1g01746' => 'bvu', 'EL10Ac2g03464' => 'bvu', 'EL10Ac4g08176' => 'bvu', 'EL10Ac7g17521' => 'bvu', 'EL10Ac8g20386' => 'bvu', 'EL10Ac9g21343' => 'bvu', 'EL10Ac9g22688' => 'bvu', 'Eucgr.B03434' => 'egr', 'Eucgr.D00618' => 'egr', 'Eucgr.E02395' => 'egr', 'Eucgr.F01129' => 'egr', 'Eucgr.F02622' => 'egr', 'Eucgr.F04207' => 'egr', 'FAN01G0570' => 'fan', 'FAN03G3351' => 'fan', 'FAN06G3702' => 'fan', 'FAN07G2149' => 'fan', 'FAN10G3758' => 'fan', 'FAN11G1170' => 'fan', 'FAN11G2050' => 'fan', 'FAN11G2724' => 'fan', 'FAN12G1700' => 'fan', 'FAN12G2028' => 'fan', 'FAN15G1160' => 'fan', 'FAN15G3063' => 'fan', 'FAN16G2540' => 'fan', 'FAN16G3077' => 'fan', 'FAN16G3624' => 'fan', 'FAN17G0221' => 'fan', 'FAN20G2492' => 'fan', 'FAN20G2905' => 'fan', 'FAN21G0548' => 'fan', 'FAN21G1300' => 'fan', 'FAN22G0077' => 'fan', 'FAN22G1315' => 'fan', 'FAN24G1280' => 'fan', 'FAN24G1445' => 'fan', 'FAN24G3527' => 'fan', 'FAN25G0464' => 'fan', 'FAN25G2885' => 'fan', 'FAN25G3270' => 'fan', 'FAN27G1101' => 'fan', 'FAN27G2846' => 'fan', 'FAN27G3524' => 'fan', 'FvH4_2g11770' => 'fve', 'FvH4_2g15630' => 'fve', 'FvH4_3g05570' => 'fve', 'FvH4_3g09110' => 'fve', 'FvH4_3g19940' => 'fve', 'FvH4_4g04821' => 'fve', 'FvH4_4g31480' => 'fve', 'FvH4_7g01740' => 'fve', 'Glyma.05G130400' => 'gma', 'Glyma.05G156400' => 'gma', 'Glyma.07G197000' => 'gma', 'Glyma.08G085151' => 'gma', 'Glyma.08G114500' => 'gma', 'Glyma.08G300400' => 'gma', 'Glyma.10G215800' => 'gma', 'Glyma.12G224400' => 'gma', 'Glyma.13G179300' => 'gma', 'Glyma.13G218151' => 'gma', 'Glyma.13G238800' => 'gma', 'Glyma.13G276900' => 'gma', 'Glyma.14G078200' => 'gma', 'Glyma.15G074500' => 'gma', 'Glyma.15G094100' => 'gma', 'Glyma.17G247200' => 'gma', 'Glyma.18G120100' => 'gma', 'Glyma.20G176000' => 'gma', 'Gohir.A01G063600' => 'ghi', 'Gohir.A01G170301' => 'ghi', 'Gohir.A02G060500' => 'ghi', 'Gohir.A05G133850' => 'ghi', 'Gohir.A05G161400' => 'ghi', 'Gohir.A06G012900' => 'ghi', 'Gohir.A06G035901' => 'ghi', 'Gohir.A06G127100' => 'ghi', 'Gohir.A06G210500' => 'ghi', 'Gohir.A08G008650' => 'ghi', 'Gohir.A09G072700' => 'ghi', 'Gohir.A09G088301' => 'ghi', 'Gohir.A10G040600' => 'ghi', 'Gohir.A12G036300' => 'ghi', 'Gohir.A12G143350' => 'ghi', 'Gohir.A12G165500' => 'ghi', 'Gohir.A13G145700' => 'ghi', 'Gohir.D01G050000' => 'ghi', 'Gohir.D01G051366' => 'ghi', 'Gohir.D01G161350' => 'ghi', 'Gohir.D02G065900' => 'ghi', 'Gohir.D05G164200' => 'ghi', 'Gohir.D05G355500' => 'ghi', 'Gohir.D06G010400' => 'ghi', 'Gohir.D06G111250' => 'ghi', 'Gohir.D06G132000' => 'ghi', 'Gohir.D06G210500' => 'ghi', 'Gohir.D07G165675' => 'ghi', 'Gohir.D08G062240' => 'ghi', 'Gohir.D08G086101' => 'ghi', 'Gohir.D08G138060' => 'ghi', 'Gohir.D09G072300' => 'ghi', 'Gohir.D10G041400' => 'ghi', 'Gohir.D11G191020' => 'ghi', 'Gohir.D11G212066' => 'ghi', 'Gohir.D12G036300' => 'ghi', 'Gohir.D12G168600' => 'ghi', 'Gohir.D13G150600' => 'ghi', 'Gorai.001G057300' => 'gra', 'Gorai.002G069900' => 'gra', 'Gorai.002G200000' => 'gra', 'Gorai.003G067600' => 'gra', 'Gorai.005G074800' => 'gra', 'Gorai.006G087300' => 'gra', 'Gorai.008G037500' => 'gra', 'Gorai.008G181400' => 'gra', 'Gorai.009G169400' => 'gra', 'Gorai.009G387900' => 'gra', 'Gorai.010G013300' => 'gra', 'Gorai.010G153800' => 'gra', 'Gorai.010G255800' => 'gra', 'Gorai.011G043700' => 'gra', 'Gorai.011G198900' => 'gra', 'Gorai.013G168400' => 'gra', 'GSVIVG01005212001' => 'vvi', 'GSVIVG01006163001' => 'vvi', 'GSVIVG01009625001' => 'vvi', 'GSVIVG01014338001' => 'vvi', 'GSVIVG01020005001' => 'vvi', 'GSVIVG01021450001' => 'vvi', 'GSVIVG01023975001' => 'vvi', 'GSVIVG01034490001' => 'vvi', 'HanXRQChr04g0112071' => 'han', 'HanXRQChr05g0131151' => 'han', 'HanXRQChr09g0262371' => 'han', 'HanXRQChr09g0268401' => 'han', 'HanXRQChr10g0279241' => 'han', 'HanXRQChr10g0297961' => 'han', 'HanXRQChr11g0326231' => 'han', 'HanXRQChr11g0328471' => 'han', 'HanXRQChr16g0507941' => 'han', 'HanXRQChr17g0560211' => 'han', 'Haze_02108' => 'cav', 'Haze_02428' => 'cav', 'Haze_05593' => 'cav', 'Haze_06448' => 'cav', 'Haze_09427' => 'cav', 'Haze_12022' => 'cav', 'Haze_17612' => 'cav', 'Haze_17928' => 'cav', 'Hma1.2p1_0032F.1_g019250' => 'hma', 'Hma1.2p1_0163F.1_g072690' => 'hma', 'Hma1.2p1_0265F.1_g106710' => 'hma', 'Hma1.2p1_0286F.1_g113970' => 'hma', 'Hma1.2p1_0363F.1_g136640' => 'hma', 'Hma1.2p1_0584F.1_g183470' => 'hma', 'Hma1.2p1_0885F.1_g232570' => 'hma', 'HPP92_006022' => 'vpl', 'HPP92_007320' => 'vpl', 'HPP92_011521' => 'vpl', 'HPP92_019387' => 'vpl', 'HPP92_024038' => 'vpl', 'Hund05891' => 'sun', 'Hund06450' => 'sun', 'Hund12053' => 'sun', 'Hund16800' => 'sun', 'Hund21222' => 'sun', 'Hund22896' => 'sun', 'Hund23746' => 'sun', 'Hund27083' => 'sun', 'Lalb_Chr02g0141831' => 'lal', 'Lalb_Chr02g0141841' => 'lal', 'Lalb_Chr05g0220411' => 'lal', 'Lalb_Chr06g0162081' => 'lal', 'Lalb_Chr09g0327651' => 'lal', 'Lalb_Chr13g0295051' => 'lal', 'Lalb_Chr15g0086801' => 'lal', 'Lalb_Chr16g0383781' => 'lal', 'Lalb_Chr16g0383791' => 'lal', 'Lalb_Chr18g0055441' => 'lal', 'Lalb_Chr18g0059611' => 'lal', 'Lalb_Chr20g0109661' => 'lal', 'Lalb_Chr20g0109831' => 'lal', 'Lalb_Chr20g0121871' => 'lal', 'Lalb_Chr22g0355361' => 'lal', 'Lalb_Chr25g0286371' => 'lal', 'Lj1A1187G43' => 'lonja', 'Lj1A1205T50' => 'lonja', 'Lj1A800G33' => 'lonja', 'Lj1C1187T7' => 'lonja', 'Lj1C843T11' => 'lonja', 'Lj1g0010940' => 'lja', 'Lj2A288T69' => 'lonja', 'Lj3g0024276' => 'lja', 'Lj4A47T76' => 'lonja', 'Lj4g0005805' => 'lja', 'Lj4g0006097' => 'lja', 'Lj4g0008528' => 'lja', 'Lj4g0024907' => 'lja', 'Lj5g0012472' => 'lja', 'Lj5g0018648' => 'lja', 'Lj6C789G1' => 'lonja', 'Lj6g0004000' => 'lja', 'Lj7A292G67' => 'lonja', 'Lj7A292T64' => 'lonja', 'Lj9A400T58' => 'lonja', 'Lsat_1_v5_gn_1_126181' => 'lsa', 'Lsat_1_v5_gn_4_123041' => 'lsa', 'Lsat_1_v5_gn_4_133620' => 'lsa', 'Lsat_1_v5_gn_4_53221' => 'lsa', 'Lsat_1_v5_gn_4_71961' => 'lsa', 'Lsat_1_v5_gn_7_105241' => 'lsa', 'Lsat_1_v5_gn_7_21361' => 'lsa', 'Lsat_1_v5_gn_7_28860' => 'lsa', 'Lsat_1_v5_gn_7_31260' => 'lsa', 'Lsat_1_v5_gn_8_52801' => 'lsa', 'Manes.02G191400' => 'mes', 'Manes.03G110100' => 'mes', 'Manes.04G071100' => 'mes', 'Manes.05G100500' => 'mes', 'Manes.05G164700' => 'mes', 'Manes.15G087000' => 'mes', 'Manes.15G121500' => 'mes', 'Manes.16G028300' => 'mes', 'Manes.17G046100' => 'mes', 'Manes.17G069800' => 'mes', 'Manes.18G100500' => 'mes', 'Mapoly0002s0109' => 'mpo', 'Mapoly0024s0007' => 'mpo', 'Mapoly0089s0032' => 'mpo', 'MBI04_g42241_MAGBIO' => 'mbi', 'MBI05_g11988_MAGBIO' => 'mbi', 'MBI05_g35452_MAGBIO' => 'mbi', 'MBI07_g30179_MAGBIO' => 'mbi', 'MBI07_g35859_MAGBIO' => 'mbi', 'MBI07_g35860_MAGBIO' => 'mbi', 'MBI07_g37166_MAGBIO' => 'mbi', 'MBI08_g18172_MAGBIO' => 'mbi', 'MBI09_g08441_MAGBIO' => 'mbi', 'MBI13_g01676_MAGBIO' => 'mbi', 'MBI14_g42955_MAGBIO' => 'mbi', 'MBI16_g13161_MAGBIO' => 'mbi', 'MBI17_g27204_MAGBIO' => 'mbi', 'MBI19_g21595_MAGBIO' => 'mbi', 'MD00G1148400' => 'mdo', 'MD02G1301200' => 'mdo', 'MD03G1227800' => 'mdo', 'MD05G1041100' => 'mdo', 'MD05G1124800' => 'mdo', 'MD05G1284000' => 'mdo', 'MD05G1338800' => 'mdo', 'MD05G1338900' => 'mdo', 'MD07G1022800' => 'mdo', 'MD10G1047500' => 'mdo', 'MD10G1127500' => 'mdo', 'MD10G1262300' => 'mdo', 'MD10G1293800' => 'mdo', 'MD16G1074300' => 'mdo', 'Medtr1g021670' => 'mtr', 'Medtr1g096320' => 'mtr', 'Medtr2g013690' => 'mtr', 'Medtr2g019450' => 'mtr', 'Medtr2g085170' => 'mtr', 'Medtr4g088785' => 'mtr', 'Medtr8g055930' => 'mtr', 'Medtr8g085850' => 'mtr', 'MELO3C002605.2' => 'cme', 'MELO3C003891.2' => 'cme', 'MELO3C004012.2' => 'cme', 'MELO3C007134.2' => 'cme', 'MELO3C008118.2' => 'cme', 'MELO3C016700.2' => 'cme', 'MELO3C024127.2' => 'cme', 'MELO3C033361.2' => 'cme', 'MELO3C033362.2' => 'cme', 'Migut.C00430' => 'egut', 'Migut.C01246' => 'egut', 'Migut.E00101' => 'egut', 'Migut.H01486' => 'egut', 'Migut.H01939' => 'egut', 'Migut.K00360' => 'egut', 'Migut.M00910' => 'egut', 'Migut.M01139' => 'egut', 'Migut.N02677' => 'egut', 'MSTRG.13252' => 'ama', 'MSTRG.14701' => 'ama', 'MSTRG.1521' => 'ama', 'MSTRG.15884' => 'ama', 'MSTRG.16242' => 'ama', 'MSTRG.22285' => 'ama', 'MSTRG.22444' => 'ama', 'MSTRG.2349' => 'ama', 'MSTRG.26308' => 'ama', 'MSTRG.28296' => 'ama', 'MSTRG.9895' => 'ama', 'Nitab4.5_0000110g0060' => 'nta', 'Nitab4.5_0000420g0130' => 'nta', 'Nitab4.5_0000422g0030' => 'nta', 'Nitab4.5_0000560g0180' => 'nta', 'Nitab4.5_0000703g0100' => 'nta', 'Nitab4.5_0000786g0200' => 'nta', 'Nitab4.5_0001336g0020' => 'nta', 'Nitab4.5_0001796g0030' => 'nta', 'Nitab4.5_0003348g0060' => 'nta', 'Nitab4.5_0003698g0040' => 'nta', 'Nitab4.5_0003942g0090' => 'nta', 'Nitab4.5_0004775g0070' => 'nta', 'Nitab4.5_0004864g0030' => 'nta', 'Nitab4.5_0005615g0020' => 'nta', 'Nitab4.5_0009288g0030' => 'nta', 'Nitab4.5_0009341g0010' => 'nta', 'Nitab4.5_0009535g0010' => 'nta', 'Nn1g03995' => 'nnu', 'Nn1g04100' => 'nnu', 'Nn1g06530' => 'nnu', 'Nn3g16404' => 'nnu', 'Nn3g17212' => 'nnu', 'Nn3g20776' => 'nnu', 'Nn3g21923' => 'nnu', 'Nn5g27737' => 'nnu', 'Nn5g29461' => 'nnu', 'Nn7g38355' => 'nnu', 'Nn8g39873' => 'nnu', 'Oeu000548.2' => 'oeu', 'Oeu004672.1' => 'oeu', 'Oeu015605.2' => 'oeu', 'Oeu016092.1' => 'oeu', 'Oeu017879.3' => 'oeu', 'Oeu024910.1' => 'oeu', 'Oeu028965.1' => 'oeu', 'Oeu031269.1' => 'oeu', 'Oeu031270.1' => 'oeu', 'Oeu032535.1' => 'oeu', 'Oeu034151.1' => 'oeu', 'Oeu034152.1' => 'oeu', 'Oeu034588.2' => 'oeu', 'Oeu050846.1' => 'oeu', 'Oeu050849.2' => 'oeu', 'Oeu051063.2' => 'oeu', 'Oeu052368.1' => 'oeu', 'Oeu052370.1' => 'oeu', 'Os01g0210400' => 'osa', 'Os01g0304300' => 'osa', 'Os01g0749100' => 'osa', 'Os02g0745800' => 'osa', 'Os03g0769050' => 'osa', 'Os05g0531500' => 'osa', 'Os06g0724300' => 'osa', 'Os11g0198100' => 'osa', 'Peaxi162Scf00069g01425' => 'pax', 'Peaxi162Scf00280g00811' => 'pax', 'Peaxi162Scf00310g00615' => 'pax', 'Peaxi162Scf00362g00542' => 'pax', 'Peaxi162Scf00461g00310' => 'pax', 'Peaxi162Scf00530g00118' => 'pax', 'Peaxi162Scf00541g00057' => 'pax', 'Peaxi162Scf00661g00017' => 'pax', 'Peaxi162Scf00926g00027' => 'pax', 'Peaxi162Scf01064g00263' => 'pax', 'Peaxi162Scf01211g00135' => 'pax', 'PGR004G2336' => 'pgr', 'PGR042G0327' => 'pgr', 'PGR042G1957' => 'pgr', 'PGR042G2003' => 'pgr', 'PGR042G3929' => 'pgr', 'PGR083G1137' => 'pgr', 'PGR083G1364' => 'pgr', 'PGSC0003DMG400003381' => 'stu', 'PGSC0003DMG400003417' => 'stu', 'PGSC0003DMG400008981' => 'stu', 'PGSC0003DMG400012417' => 'stu', 'PGSC0003DMG400012823' => 'stu', 'PGSC0003DMG400016885' => 'stu', 'PGSC0003DMG400022812' => 'stu', 'PGSC0003DMG400029726' => 'stu', 'PGSC0003DMG401009243' => 'stu', 'PGSC0003DMG401031505' => 'stu', 'PGSC0003DMG402031505' => 'stu', 'Phvul.001G017600' => 'pvu', 'Phvul.002G193500' => 'pvu', 'Phvul.002G228900' => 'pvu', 'Phvul.002G236800' => 'pvu', 'Phvul.003G049500' => 'pvu', 'Phvul.005G072000' => 'pvu', 'Phvul.006G164800' => 'pvu', 'Phvul.006G185100' => 'pvu', 'Phvul.007G090000' => 'pvu', 'Potri.001G399800' => 'ptr', 'Potri.002G149900' => 'ptr', 'Potri.004G044100' => 'ptr', 'Potri.004G177600' => 'ptr', 'Potri.009G138000' => 'ptr', 'Potri.010G094000' => 'ptr', 'Potri.011G053000' => 'ptr', 'Potri.011G119300' => 'ptr', 'Potri.013G113700' => 'ptr', 'Potri.018G107800' => 'ptr', 'Potri.019G084100' => 'ptr', 'Pp3c14_23720' => 'ppa', 'Pp3c16_6340' => 'ppa', 'Pp3c23_13420' => 'ppa', 'Pp3c24_2740' => 'ppa', 'Pp3c25_860' => 'ppa', 'Pp3c8_21750' => 'ppa', 'Prupe.1G273000' => 'ppe', 'Prupe.1G273700' => 'ppe', 'Prupe.1G274100' => 'ppe', 'Prupe.2G023300' => 'ppe', 'Prupe.4G048000' => 'ppe', 'Prupe.4G080400' => 'ppe', 'Prupe.4G181200' => 'ppe', 'Prupe.8G056900' => 'ppe', 'Prupe.8G168700' => 'ppe', 'Psat1g189080' => 'psa', 'Psat1g204760' => 'psa', 'Psat4g175560' => 'psa', 'Psat4g177720' => 'psa', 'Psat5g244240' => 'psa', 'Psat6g010720' => 'psa', 'Psat6g187200' => 'psa', 'Psat7g072040' => 'psa', 'PSO017G3501' => 'pso', 'PSO063G2148' => 'pso', 'PSO063G5608' => 'pso', 'PSO210G6392' => 'pso', 'PSO541G2319' => 'pso', 'PSO541G2836' => 'pso', 'PSO541G4012' => 'pso', 'PSO541G6253' => 'pso', 'PSO675G0580' => 'pso', 'PSO675G0856' => 'pso', 'PSO675G5635' => 'pso', 'PSO675G9157' => 'pso', 'PSO832G1660' => 'pso', 'PSO832G1969' => 'pso', 'QL02p007186' => 'qlo', 'QL02p033904' => 'qlo', 'QL03p064391' => 'qlo', 'QL05p040593' => 'qlo', 'QL05p058242' => 'qlo', 'QL08p021825' => 'qlo', 'QL11p004981' => 'qlo', 'RcHm_v2.0_Chr1g0318301' => 'rch', 'RcHm_v2.0_Chr4g0418501' => 'rch', 'RcHm_v2.0_Chr4g0439971' => 'rch', 'RcHm_v2.0_Chr5g0008541' => 'rch', 'RcHm_v2.0_Chr5g0014101' => 'rch', 'RcHm_v2.0_Chr5g0014131' => 'rch', 'RcHm_v2.0_Chr5g0033621' => 'rch', 'RcHm_v2.0_Chr6g0272041' => 'rch', 'RcHm_v2.0_Chr6g0278831' => 'rch', 'Rhsim02G0130400' => 'rsi', 'Rhsim02G0171100' => 'rsi', 'Rhsim05G0053000' => 'rsi', 'Rhsim05G0053100' => 'rsi', 'Rhsim06G0096500' => 'rsi', 'Rhsim06G0096600' => 'rsi', 'Rhsim06G0199100' => 'rsi', 'Rhsim12G0062300' => 'rsi', 'Rhsim12G0062800' => 'rsi', 'Sabra02G0118600' => 'sbr', 'Sabra04G0027300' => 'sbr', 'Sabra04G0119500' => 'sbr', 'Sabra08G0112500' => 'sbr', 'Sabra11G0036800' => 'sbr', 'Sabra11G0103800' => 'sbr', 'Sabra13G0096300' => 'sbr', 'Sabra16G0262300' => 'sbr', 'Sabra18G0091700' => 'sbr', 'Sabra19G0095400' => 'sbr', 'SalBow6G3080' => 'sbo', 'SalBow7G1157' => 'sbo', 'SalBow7G2123' => 'sbo', 'SalBow7G2285' => 'sbo', 'SalBow7G3537' => 'sbo', 'SalBow8G2947' => 'sbo', 'SalBow8G4463' => 'sbo', 'SalBow8G5466' => 'sbo', 'Sc01g0001750' => 'sci', 'Sc02g0006640' => 'sci', 'Sc02g0006670' => 'sci', 'Sc04g0008220' => 'sci', 'Sc05g0006190' => 'sci', 'Sc08g0002760' => 'sci', 'Sc17g0006170' => 'sci', 'Sc22g0002050' => 'sci', 'Sc23g0001190' => 'sci', 'Sc24g0000980' => 'sci', 'Sed0006245' => 'sed', 'Sed0007543' => 'sed', 'Sed0009411' => 'sed', 'Sed0010765' => 'sed', 'Sed0012944' => 'sed', 'Sed0014682' => 'sed', 'Sed0016174' => 'sed', 'Sed0016796' => 'sed', 'Sed0020317' => 'sed', 'Sed0021467' => 'sed', 'SEGI_01316' => 'sgi', 'SEGI_03374' => 'sgi', 'SEGI_16265' => 'sgi', 'SEGI_18569' => 'sgi', 'SEGI_20351' => 'sgi', 'SEGI_26395' => 'sgi', 'SEGI_29469' => 'sgi', 'SEGI_34771' => 'sgi', 'SEGI_36769' => 'sgi', 'SEGI_37139' => 'sgi', 'SGA_v2.0_scaffold100G29687' => 'sas', 'SGA_v2.0_scaffold118G32472' => 'sas', 'SGA_v2.0_scaffold14G07051' => 'sas', 'SGA_v2.0_scaffold183G39845' => 'sas', 'SGA_v2.0_scaffold1G00174' => 'sas', 'SGA_v2.0_scaffold22G09714' => 'sas', 'SGA_v2.0_scaffold333G48992' => 'sas', 'SGA_v2.0_scaffold46G17491' => 'sas', 'SGA_v2.0_scaffold49G18294' => 'sas', 'SGA_v2.0_scaffold63G21658' => 'sas', 'SHI01741' => 'shi', 'SHI05771' => 'shi', 'SHI18077' => 'shi', 'SHI20525' => 'shi', 'SHI20527' => 'shi', 'SHI20528' => 'shi', 'SMO172G0185' => 'smo', 'SMO198G0020' => 'smo', 'SMO351G0006' => 'smo', 'SMO356G0118' => 'smo', 'SMO358G0296' => 'smo', 'SMO367G0079' => 'smo', 'SMO367G1277' => 'smo', 'Solyc01g014220.3' => 'sly', 'Solyc01g111770.2' => 'sly', 'Solyc02g078180.3' => 'sly', 'Solyc03g006430.3' => 'sly', 'Solyc03g006456.1' => 'sly', 'Solyc03g079860.2' => 'sly', 'Solyc04g079770.3' => 'sly', 'Solyc05g007430.4' => 'sly', 'Solyc07g063150.3' => 'sly', 'Solyc08g016620.3' => 'sly', 'Solyc09g057590.3' => 'sly', 'Solyc09g057600.1' => 'sly', 'Solyc10g009050.3' => 'sly', 'Solyc11g017420.2' => 'sly', 'Sopen01g053810' => 'spe', 'Sopen02g023040' => 'spe', 'Sopen03g002440' => 'spe', 'Sopen04g033350' => 'spe', 'Sopen05g003310' => 'spe', 'Sopen07g004050' => 'spe', 'Sopen07g031340' => 'spe', 'Sopen08g006990' => 'spe', 'Sopen10g004830' => 'spe', 'Sopen11g009370' => 'spe', 'Sp1g24450' => 'spa', 'Sp1g29670' => 'spa', 'Sp1g39600' => 'spa', 'Sp2g11080' => 'spa', 'Sp2g13970' => 'spa', 'Sp4g16130' => 'spa', 'Sp6g13080' => 'spa', 'Sp7g37270' => 'spa', 'TAR371G0065' => 'tar', 'TAR376G0340' => 'tar', 'TAR376G0435' => 'tar', 'TAR381G0002' => 'tar', 'TAR381G1236' => 'tar', 'TAR624G0055' => 'tar', 'TAR624G0324' => 'tar', 'TAR624G0696' => 'tar', 'TAR624G0906' => 'tar', 'TAR625G0107' => 'tar', 'TAR626G0015' => 'tar', 'TAR626G1356' => 'tar', 'TAR627G0888' => 'tar', 'TAR628G0399' => 'tar', 'TAR628G1327' => 'tar', 'TAR629G2831' => 'tar', 'TAR629G2874' => 'tar', 'TAR633G1432' => 'tar', 'TAR633G2771' => 'tar', 'THA.LOC104803394' => 'tha', 'THA.LOC104805153' => 'tha', 'THA.LOC104806784' => 'tha', 'THA.LOC104810473' => 'tha', 'THA.LOC104813100' => 'tha', 'THA.LOC104814215' => 'tha', 'THA.LOC104815554' => 'tha', 'THA.LOC104820544' => 'tha', 'THA.LOC104824754' => 'tha', 'THA.LOC104827717' => 'tha', 'Thecc.02G031400' => 'tca', 'Thecc.02G055900' => 'tca', 'Thecc.02G350800' => 'tca', 'Thecc.06G150900' => 'tca', 'Thecc.06G186600' => 'tca', 'Thecc.07G089600' => 'tca', 'Thecc.08G020400' => 'tca', 'Thecc.08G182100' => 'tca', 'Thhalv10000873m.g' => 'esa', 'Thhalv10004185m.g' => 'esa', 'Thhalv10006981m.g' => 'esa', 'Thhalv10007204m.g' => 'esa', 'Thhalv10011374m.g' => 'esa', 'Thhalv10013482m.g' => 'esa', 'Thhalv10017801m.g' => 'esa', 'Thhalv10024983m.g' => 'esa', 'TPR.G12072' => 'tpr', 'TPR.G15769' => 'tpr', 'TPR.G16504' => 'tpr', 'TPR.G16506' => 'tpr', 'TPR.G24345' => 'tpr', 'TPR.G26666' => 'tpr', 'TPR.G27320' => 'tpr', 'TPR.G31819' => 'tpr', 'TPR.G38879' => 'tpr', 'TPR.G39015' => 'tpr', 'TPR.G8819' => 'tpr', 'TWI09G0924' => 'twi', 'TWI12G0811' => 'twi', 'TWI12G1294' => 'twi', 'TWI31G0150' => 'twi', 'TWI36G1262' => 'twi', 'TWI38G1287' => 'twi', 'TWI38G1633' => 'twi', 'TWI38G1982' => 'twi', 'TWI39G0116' => 'twi', 'TWI60G1011' => 'twi', 'TWI63G0171' => 'twi', 'TWI73G0839' => 'twi', 'TWI79G1511' => 'twi', 'unitig_0.g915' => 'ugi', 'unitig_0.g916' => 'ugi', 'unitig_21.g20219' => 'ugi', 'unitig_21.g20416' => 'ugi', 'unitig_578.g16132' => 'ugi', 'unitig_578.g16718' => 'ugi', 'unitig_62.g23481' => 'ugi', 'unitig_744.g24535' => 'ugi', 'unitig_749.g13525' => 'ugi', 'vmacro01248' => 'vma', 'vmacro02290' => 'vma', 'vmacro10946' => 'vma', 'vmacro11865' => 'vma', 'vmacro12493' => 'vma', 'vmacro17322' => 'vma', 'vmacro21599' => 'vma', 'vmacro23041' => 'vma', 'VMungo0251G0004' => 'vmu', 'VMungo0251G2639' => 'vmu', 'VMungo0251G2967' => 'vmu', 'VMungo0540G0864' => 'vmu', 'VMungo0540G1569' => 'vmu', 'VMungo0647G0317' => 'vmu', 'VMungo0720G1373' => 'vmu', 'VMungo0720G1508' => 'vmu', 'VMungo1080G0485' => 'vmu', 'VMungo1215G3177' => 'vmu', 'Zm00001eb112600' => 'zma', 'Zm00001eb120220' => 'zma', 'Zm00001eb153240' => 'zma', 'Zm00001eb168880' => 'zma', 'Zm00001eb213920' => 'zma', 'Zm00001eb228280' => 'zma', 'Zm00001eb254580' => 'zma', 'Zm00001eb272180' => 'zma', 'Zm00001eb293190' => 'zma', 'Zm00001eb322930' => 'zma', 'Zm00001eb353360' => 'zma', 'Zm00001eb353390' => 'zma', 'Zm00001eb353430' => 'zma', 'Zm00001eb353440' => 'zma', 'Zm00001eb353780' => 'zma' ) $gf_id = 'HOM05D000499' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000499' ) $data_identifier = 'HOM05D000499' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 29, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 12, 'amhyb' => (int) 8, 'aly' => (int) 12, 'aox' => (int) 9, 'arhy' => (int) 26, 'ath' => (int) 8, 'atr' => (int) 7, 'acertr' => (int) 10, 'cqu' => (int) 15, 'bca' => (int) 29, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 11, 'cansat' => (int) 8, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 9, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 8, 'cpa' => (int) 10, 'csa' => (int) 7, 'camsi' => (int) 20, 'dca' => (int) 8, 'din' => (int) 12, 'dzi' => (int) 14, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 6, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 38, 'gra' => (int) 16, 'vvi' => (int) 8, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 5, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 11, 'lja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 11, 'mpo' => (int) 3, 'mbi' => (int) 14, 'mdo' => (int) 14, 'mtr' => (int) 8, 'cme' => (int) 9, 'egut' => (int) 9, 'ama' => (int) 11, 'nta' => (int) 17, 'nnu' => (int) 11, 'oeu' => (int) 18, 'osa' => (int) 8, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 6, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 9, 'rsi' => (int) 9, 'sbr' => (int) 10, 'sbo' => (int) 8, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 10, 'sas' => (int) 10, 'shi' => (int) 6, 'smo' => (int) 7, 'sly' => (int) 14, 'spe' => (int) 10, 'spa' => (int) 8, 'tar' => (int) 19, 'tha' => (int) 10, 'tca' => (int) 8, 'esa' => (int) 8, 'tpr' => (int) 11, 'twi' => (int) 13, 'ugi' => (int) 9, 'vma' => (int) 8, 'vmu' => (int) 10, 'zma' => (int) 15 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb353780' $species_info = array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ) $local_species = 'rch' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000499', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1066', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p29780' => 'bna', 'A02p33180' => 'bna', 'A03p16470' => 'bna', 'A03p66010' => 'bna', 'A04p25970' => 'bna', 'A06p01270' => 'bna', 'A06p46080' => 'bna', 'A07p11400' => 'bna', 'A08p01840' => 'bna', 'A08p08230' => 'bna', 'A08p25740' => 'bna', 'A09p32070' => 'bna', 'A09p37830' => 'bna', 'A09p42840' => 'bna', 'A09p42850' => 'bna', 'Aa31LG10G2060' => 'aar', 'Aa31LG2G7410' => 'aar', 'Aa31LG6G10200' => 'aar', 'Aa31LG6G16680' => 'aar', 'Aa31LG6G8470' => 'aar', 'Aa31LG9G12730' => 'aar', 'Aa31LG9G13680' => 'aar', 'Aa31LG9G14920' => 'aar', 'Aa31LG9G6650' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4977' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5467' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3254' => 'aag', 'Actinidia02578' => 'ach', 'Actinidia07693' => 'ach', 'Actinidia08413' => 'ach', 'Actinidia08414' => 'ach', 'Actinidia15289' => 'ach', 'Actinidia19871' => 'ach', 'Actinidia21475' => 'ach', 'Actinidia22576' => 'ach', 'Actinidia28327' => 'ach', 'Actinidia32491' => 'ach', 'Actinidia39463' => 'ach', 'Actinidia39571' => 'ach', 'Ah.01g013750' => 'amhyb', 'Ah.01g023210' => 'amhyb', 'Ah.04g164850' => 'amhyb', 'Ah.05g178060' => 'amhyb', 'Ah.07g204270' => 'amhyb', 'Ah.07g208480' => 'amhyb', 'Ah.09g237410' => 'amhyb', 'Ah.14g089460' => 'amhyb', 'AL1G41790' => 'aly', 'AL1G49050' => 'aly', 'AL1G53810' => 'aly', 'AL1G61400' => 'aly', 'AL4G18580' => 'aly', 'AL5G12510' => 'aly', 'AL5G12540' => 'aly', 'AL6G43230' => 'aly', 'AL7G10370' => 'aly', 'AL7G19250' => 'aly', 'AL8G12240' => 'aly', 'AL8G18540' => 'aly', 'Aqoxy1G02409' => 'aox', 'Aqoxy2G03993' => 'aox', 'Aqoxy3G03357' => 'aox', 'Aqoxy4G00785' => 'aox', 'Aqoxy5G02598' => 'aox', 'Aqoxy6G00132' => 'aox', 'Aqoxy7G01776' => 'aox', 'Aqoxy7G02316' => 'aox', 'Aqoxy7G03973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.12AFKW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B8730' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27IQR1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3F75VG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3RE0GA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41TCQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.527VTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FIR39' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5W8UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DA38EV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ63HS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H1I32C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HC27T5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4M8AP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7N3CZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9UVDZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LS1NQA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT1D4B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SKC4TM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCFV76' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF9Q1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQWD9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1ZM88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WE07RT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YCK7VH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJE6Q6' => 'arhy', 'AT1G28240' => 'ath', 'AT1G34550' => 'ath', 'AT1G53040' => 'ath', 'AT2G02910' => 'ath', 'AT4G09630' => 'ath', 'AT4G38500' => 'ath', 'AT5G42660' => 'ath', 'AT5G46220' => 'ath', 'ATR0152G026' => 'atr', 'ATR0564G343' => 'atr', 'ATR0706G151' => 'atr', 'ATR0733G207' => 'atr', 'ATR0751G234' => 'atr', 'ATR0807G048' => 'atr', 'ATR1091G084' => 'atr', 'Atru.chr10.1229' => 'acertr', 'Atru.chr10.1230' => 'acertr', 'Atru.chr10.1874' => 'acertr', 'Atru.chr11.1808' => 'acertr', 'Atru.chr13.1795' => 'acertr', 'Atru.chr13.570' => 'acertr', 'Atru.chr2.2608' => 'acertr', 'Atru.chr2.2609' => 'acertr', 'Atru.chr5.3428' => 'acertr', 'Atru.chr8.1171' => 'acertr', 'AUR62004651' => 'cqu', 'AUR62008675' => 'cqu', 'AUR62010014' => 'cqu', 'AUR62013004' => 'cqu', 'AUR62014825' => 'cqu', 'AUR62015015' => 'cqu', 'AUR62015151' => 'cqu', 'AUR62017020' => 'cqu', 'AUR62019422' => 'cqu', 'AUR62023570' => 'cqu', 'AUR62025571' => 'cqu', 'AUR62029098' => 'cqu', 'AUR62033863' => 'cqu', 'AUR62034296' => 'cqu', 'AUR62040075' => 'cqu', 'BcaB02g07334' => 'bca', 'BcaB02g10575' => 'bca', 'BcaB03g12119' => 'bca', 'BcaB03g12120' => 'bca', 'BcaB03g13945' => 'bca', 'BcaB04g17123' => 'bca', 'BcaB04g17867' => 'bca', 'BcaB04g19839' => 'bca', 'BcaB07g30317' => 'bca', 'BcaB07g32432' => 'bca', 'BcaB07g33362' => 'bca', 'BcaB08g36611' => 'bca', 'BcaC01g00028' => 'bca', 'BcaC01g01356' => 'bca', 'BcaC01g02034' => 'bca', 'BcaC01g06051' => 'bca', 'BcaC03g16839' => 'bca', 'BcaC03g17176' => 'bca', 'BcaC05g26829' => 'bca', 'BcaC06g31490' => 'bca', 'BcaC06g35344' => 'bca', 'BcaC06g36570' => 'bca', 'BcaC07g37537' => 'bca', 'BcaC08g43491' => 'bca', 'BcaC08g43773' => 'bca', 'BcaNung00234' => 'bca', 'BcaNung01982' => 'bca', 'BcaNung03707' => 'bca', 'BcaNung06454' => 'bca', 'BolC2t10762H' => 'bol', 'BolC2t11191H' => 'bol', 'BolC3t14322H' => 'bol', 'BolC3t19747H' => 'bol', 'BolC3t21425H' => 'bol', 'BolC4t27800H' => 'bol', 'BolC5t31423H' => 'bol', 'BolC6t35951H' => 'bol', 'BolC6t36282H' => 'bol', 'BolC7t40678H' => 'bol', 'BolC7t40679H' => 'bol', 'BolC7t42222H' => 'bol', 'BolC7t43492H' => 'bol', 'BolC7t46785H' => 'bol', 'BolC8t47853H' => 'bol', 'BolC9t56805H' => 'bol', 'BraA02t08000Z' => 'bra', 'BraA02t08341Z' => 'bra', 'BraA03t10936Z' => 'bra', 'BraA03t15657Z' => 'bra', 'BraA04t18100Z' => 'bra', 'BraA05t20523Z' => 'bra', 'BraA06t23353Z' => 'bra', 'BraA06t27473Z' => 'bra', 'BraA06t27769Z' => 'bra', 'BraA07t28928Z' => 'bra', 'BraA08t32236Z' => 'bra', 'BraA08t32841Z' => 'bra', 'BraA08t34524Z' => 'bra', 'BraA09t38742Z' => 'bra', 'BraA09t39295Z' => 'bra', 'C02p47180' => 'bna', 'C02p50990' => 'bna', 'C03p19360' => 'bna', 'C03p74950' => 'bna', 'C03p91000' => 'bna', 'C04p63260' => 'bna', 'C05p27050' => 'bna', 'C06p08750' => 'bna', 'C06p11490' => 'bna', 'C07p02820' => 'bna', 'C07p17180' => 'bna', 'C07p29440' => 'bna', 'C07p63730' => 'bna', 'C09p39260' => 'bna', 'CAN.G1164.34' => 'can', 'CAN.G1164.39' => 'can', 'CAN.G1530.3' => 'can', 'CAN.G162.61' => 'can', 'CAN.G176.6' => 'can', 'CAN.G289.49' => 'can', 'CAN.G370.21' => 'can', 'CAN.G370.22' => 'can', 'CAN.G371.117' => 'can', 'CAN.G58.37' => 'can', 'CAN.G588.98' => 'can', 'CANSAT21G2266' => 'cansat', 'CANSAT25G2799' => 'cansat', 'CANSAT35G0862' => 'cansat', 'CANSAT35G1704' => 'cansat', 'CANSAT35G1760' => 'cansat', 'CANSAT56G3971' => 'cansat', 'CANSAT56G4116' => 'cansat', 'CANSAT80G1259' => 'cansat', 'CARHR027730' => 'chi', 'CARHR033880' => 'chi', 'CARHR043270' => 'chi', 'CARHR145330' => 'chi', 'CARHR145340' => 'chi', 'CARHR175570' => 'chi', 'CARHR181570' => 'chi', 'CARHR258470' => 'chi', 'CARHR260490' => 'chi', 'CARHR294220' => 'chi', 'Carub.0001s2668' => 'cru', 'Carub.0001s3257' => 'cru', 'Carub.0001s4220' => 'cru', 'Carub.0005s0179' => 'cru', 'Carub.0006s2807' => 'cru', 'Carub.0007s0039' => 'cru', 'Carub.0008s0169' => 'cru', 'Carub.0008s0636' => 'cru', 'Ca_00338_v3' => 'car', 'Ca_00542_v3' => 'car', 'Ca_01844_v3' => 'car', 'Ca_10611_v3' => 'car', 'Ca_13326_v3' => 'car', 'Ca_17944_v3' => 'car', 'Ca_18546_v3' => 'car', 'Ca_24219_v3' => 'car', 'Ca_29972_v3' => 'car', 'CBR_g3681' => 'cbr', 'CBR_g40021' => 'cbr', 'Cc01_g08140' => 'ccan', 'Cc02_g13410' => 'ccan', 'Cc02_g37480' => 'ccan', 'Cc05_g12030' => 'ccan', 'Cc09_g03370' => 'ccan', 'Cc09_g10300' => 'ccan', 'Cc10_g03530' => 'ccan', 'Cc10_g11380' => 'ccan', 'CDE01G0176' => 'cde', 'CDE02G0675' => 'cde', 'CDE02G0942' => 'cde', 'CDE02G1153' => 'cde', 'CDE02G4177' => 'cde', 'CDE04G2117' => 'cde', 'CDE04G2736' => 'cde', 'CDE08G1161' => 'cde', 'CDE09G1238' => 'cde', 'Cfa000467' => 'cfa', 'Cfa000947' => 'cfa', 'Cfa004969' => 'cfa', 'Cfa005284' => 'cfa', 'Cfa008993' => 'cfa', 'Cfa018187' => 'cfa', 'Cfa018454' => 'cfa', 'Cfa020585' => 'cfa', 'Ciclev10000424m.g' => 'ccl', 'Ciclev10003605m.g' => 'ccl', 'Ciclev10007828m.g' => 'ccl', 'Ciclev10014620m.g' => 'ccl', 'Ciclev10015169m.g' => 'ccl', 'Ciclev10018291m.g' => 'ccl', 'Ciclev10028256m.g' => 'ccl', 'Ciclev10033822m.g' => 'ccl', 'CiPaw.05G060300' => 'cil', 'CiPaw.05G085000' => 'cil', 'CiPaw.06G083700' => 'cil', 'CiPaw.06G120300' => 'cil', 'CiPaw.09G060500' => 'cil', 'CiPaw.09G123800' => 'cil', 'CiPaw.11G169700' => 'cil', 'CiPaw.12G118300' => 'cil', 'CiPaw.15G071000' => 'cil', 'CiPaw.15G081900' => 'cil', 'ClCG01G024610' => 'cla', 'ClCG03G006070' => 'cla', 'ClCG05G019250' => 'cla', 'ClCG09G009500' => 'cla', 'ClCG11G008200' => 'cla', 'ClCG11G018080' => 'cla', 'COL.COLO4_17373' => 'col', 'COL.COLO4_22994' => 'col', 'COL.COLO4_26389' => 'col', 'COL.COLO4_27170' => 'col', 'COL.COLO4_31074' => 'col', 'COL.COLO4_31465' => 'col', 'COL.COLO4_36438' => 'col', 'COL.COLO4_36439' => 'col', 'Cpa.g.c38781' => 'cpa', 'Cpa.g.sc128.12' => 'cpa', 'Cpa.g.sc166.7' => 'cpa', 'Cpa.g.sc166.8' => 'cpa', 'Cpa.g.sc20.111' => 'cpa', 'Cpa.g.sc27.31' => 'cpa', 'Cpa.g.sc64.36' => 'cpa', 'Cpa.g.sc64.37' => 'cpa', 'Cpa.g.sc66.49' => 'cpa', 'Cpa.g.sc80.64' => 'cpa', 'CsaV3_1G012320' => 'csa', 'CsaV3_2G008480' => 'csa', 'CsaV3_2G033450' => 'csa', 'CsaV3_3G044830' => 'csa', 'CsaV3_4G033710' => 'csa', 'CsaV3_6G051730' => 'csa', 'CsaV3_7G025350' => 'csa', 'CSS0001067' => 'camsi', 'CSS0005996' => 'camsi', 'CSS0006590' => 'camsi', 'CSS0009673' => 'camsi', 'CSS0010201' => 'camsi', 'CSS0010549' => 'camsi', 'CSS0011364' => 'camsi', 'CSS0014473' => 'camsi', 'CSS0014961' => 'camsi', 'CSS0020191' => 'camsi', 'CSS0021165' => 'camsi', 'CSS0022306' => 'camsi', 'CSS0030591' => 'camsi', 'CSS0030696' => 'camsi', 'CSS0032653' => 'camsi', 'CSS0037487' => 'camsi', 'CSS0041102' => 'camsi', 'CSS0041261' => 'camsi', 'CSS0046246' => 'camsi', 'CSS0049256' => 'camsi', 'DCAR_004075' => 'dca', 'DCAR_011538' => 'dca', 'DCAR_019553' => 'dca', 'DCAR_020952' => 'dca', 'DCAR_021739' => 'dca', 'DCAR_027407' => 'dca', 'DCAR_027913' => 'dca', 'DCAR_028066' => 'dca', 'Dinv05899' => 'din', 'Dinv07563' => 'din', 'Dinv08010' => 'din', 'Dinv14125' => 'din', 'Dinv20172' => 'din', 'Dinv30743' => 'din', 'Dinv31229' => 'din', 'Dinv34162' => 'din', 'Dinv36028' => 'din', 'Dinv39368' => 'din', 'Dinv40565' => 'din', 'Dinv41706' => 'din', 'Duzib052G0089' => 'dzi', 'Duzib116G0641' => 'dzi', 'Duzib132G0069' => 'dzi', 'Duzib132G1219' => 'dzi', 'Duzib147G0278' => 'dzi', 'Duzib160G0480' => 'dzi', 'Duzib170G0661' => 'dzi', 'Duzib177G0591' => 'dzi', 'Duzib187G1353' => 'dzi', 'Duzib192G0858' => 'dzi', 'Duzib192G0883' => 'dzi', 'Duzib213G0506' => 'dzi', 'Duzib235G0289' => 'dzi', 'Duzib251G0422' => 'dzi', 'ECA232G3898' => 'eca', 'ECA233G5950' => 'eca', 'ECA234G1699' => 'eca', 'ECA234G2421' => 'eca', 'ECA236G0426' => 'eca', 'ECA236G4331' => 'eca', 'ECA248G2573' => 'eca', 'EL10Ac1g00077' => 'bvu', 'EL10Ac1g01746' => 'bvu', 'EL10Ac2g03464' => 'bvu', 'EL10Ac4g08176' => 'bvu', 'EL10Ac7g17521' => 'bvu', 'EL10Ac8g20386' => 'bvu', 'EL10Ac9g21343' => 'bvu', 'EL10Ac9g22688' => 'bvu', 'Eucgr.B03434' => 'egr', 'Eucgr.D00618' => 'egr', 'Eucgr.E02395' => 'egr', 'Eucgr.F01129' => 'egr', 'Eucgr.F02622' => 'egr', 'Eucgr.F04207' => 'egr', 'FAN01G0570' => 'fan', 'FAN03G3351' => 'fan', 'FAN06G3702' => 'fan', 'FAN07G2149' => 'fan', 'FAN10G3758' => 'fan', 'FAN11G1170' => 'fan', 'FAN11G2050' => 'fan', 'FAN11G2724' => 'fan', 'FAN12G1700' => 'fan', 'FAN12G2028' => 'fan', 'FAN15G1160' => 'fan', 'FAN15G3063' => 'fan', 'FAN16G2540' => 'fan', 'FAN16G3077' => 'fan', 'FAN16G3624' => 'fan', 'FAN17G0221' => 'fan', 'FAN20G2492' => 'fan', 'FAN20G2905' => 'fan', 'FAN21G0548' => 'fan', 'FAN21G1300' => 'fan', 'FAN22G0077' => 'fan', 'FAN22G1315' => 'fan', 'FAN24G1280' => 'fan', 'FAN24G1445' => 'fan', 'FAN24G3527' => 'fan', 'FAN25G0464' => 'fan', 'FAN25G2885' => 'fan', 'FAN25G3270' => 'fan', 'FAN27G1101' => 'fan', 'FAN27G2846' => 'fan', 'FAN27G3524' => 'fan', 'FvH4_2g11770' => 'fve', 'FvH4_2g15630' => 'fve', 'FvH4_3g05570' => 'fve', 'FvH4_3g09110' => 'fve', 'FvH4_3g19940' => 'fve', 'FvH4_4g04821' => 'fve', 'FvH4_4g31480' => 'fve', 'FvH4_7g01740' => 'fve', 'Glyma.05G130400' => 'gma', 'Glyma.05G156400' => 'gma', 'Glyma.07G197000' => 'gma', 'Glyma.08G085151' => 'gma', 'Glyma.08G114500' => 'gma', 'Glyma.08G300400' => 'gma', 'Glyma.10G215800' => 'gma', 'Glyma.12G224400' => 'gma', 'Glyma.13G179300' => 'gma', 'Glyma.13G218151' => 'gma', 'Glyma.13G238800' => 'gma', 'Glyma.13G276900' => 'gma', 'Glyma.14G078200' => 'gma', 'Glyma.15G074500' => 'gma', 'Glyma.15G094100' => 'gma', 'Glyma.17G247200' => 'gma', 'Glyma.18G120100' => 'gma', 'Glyma.20G176000' => 'gma', 'Gohir.A01G063600' => 'ghi', 'Gohir.A01G170301' => 'ghi', 'Gohir.A02G060500' => 'ghi', 'Gohir.A05G133850' => 'ghi', 'Gohir.A05G161400' => 'ghi', 'Gohir.A06G012900' => 'ghi', 'Gohir.A06G035901' => 'ghi', 'Gohir.A06G127100' => 'ghi', 'Gohir.A06G210500' => 'ghi', 'Gohir.A08G008650' => 'ghi', 'Gohir.A09G072700' => 'ghi', 'Gohir.A09G088301' => 'ghi', 'Gohir.A10G040600' => 'ghi', 'Gohir.A12G036300' => 'ghi', 'Gohir.A12G143350' => 'ghi', 'Gohir.A12G165500' => 'ghi', 'Gohir.A13G145700' => 'ghi', 'Gohir.D01G050000' => 'ghi', 'Gohir.D01G051366' => 'ghi', 'Gohir.D01G161350' => 'ghi', 'Gohir.D02G065900' => 'ghi', 'Gohir.D05G164200' => 'ghi', 'Gohir.D05G355500' => 'ghi', 'Gohir.D06G010400' => 'ghi', 'Gohir.D06G111250' => 'ghi', 'Gohir.D06G132000' => 'ghi', 'Gohir.D06G210500' => 'ghi', 'Gohir.D07G165675' => 'ghi', 'Gohir.D08G062240' => 'ghi', 'Gohir.D08G086101' => 'ghi', 'Gohir.D08G138060' => 'ghi', 'Gohir.D09G072300' => 'ghi', 'Gohir.D10G041400' => 'ghi', 'Gohir.D11G191020' => 'ghi', 'Gohir.D11G212066' => 'ghi', 'Gohir.D12G036300' => 'ghi', 'Gohir.D12G168600' => 'ghi', 'Gohir.D13G150600' => 'ghi', 'Gorai.001G057300' => 'gra', 'Gorai.002G069900' => 'gra', 'Gorai.002G200000' => 'gra', 'Gorai.003G067600' => 'gra', 'Gorai.005G074800' => 'gra', 'Gorai.006G087300' => 'gra', 'Gorai.008G037500' => 'gra', 'Gorai.008G181400' => 'gra', 'Gorai.009G169400' => 'gra', 'Gorai.009G387900' => 'gra', 'Gorai.010G013300' => 'gra', 'Gorai.010G153800' => 'gra', 'Gorai.010G255800' => 'gra', 'Gorai.011G043700' => 'gra', 'Gorai.011G198900' => 'gra', 'Gorai.013G168400' => 'gra', 'GSVIVG01005212001' => 'vvi', 'GSVIVG01006163001' => 'vvi', 'GSVIVG01009625001' => 'vvi', 'GSVIVG01014338001' => 'vvi', 'GSVIVG01020005001' => 'vvi', 'GSVIVG01021450001' => 'vvi', 'GSVIVG01023975001' => 'vvi', 'GSVIVG01034490001' => 'vvi', 'HanXRQChr04g0112071' => 'han', 'HanXRQChr05g0131151' => 'han', 'HanXRQChr09g0262371' => 'han', 'HanXRQChr09g0268401' => 'han', 'HanXRQChr10g0279241' => 'han', 'HanXRQChr10g0297961' => 'han', 'HanXRQChr11g0326231' => 'han', 'HanXRQChr11g0328471' => 'han', 'HanXRQChr16g0507941' => 'han', 'HanXRQChr17g0560211' => 'han', 'Haze_02108' => 'cav', 'Haze_02428' => 'cav', 'Haze_05593' => 'cav', 'Haze_06448' => 'cav', 'Haze_09427' => 'cav', 'Haze_12022' => 'cav', 'Haze_17612' => 'cav', 'Haze_17928' => 'cav', 'Hma1.2p1_0032F.1_g019250' => 'hma', 'Hma1.2p1_0163F.1_g072690' => 'hma', 'Hma1.2p1_0265F.1_g106710' => 'hma', 'Hma1.2p1_0286F.1_g113970' => 'hma', 'Hma1.2p1_0363F.1_g136640' => 'hma', 'Hma1.2p1_0584F.1_g183470' => 'hma', 'Hma1.2p1_0885F.1_g232570' => 'hma', 'HPP92_006022' => 'vpl', 'HPP92_007320' => 'vpl', 'HPP92_011521' => 'vpl', 'HPP92_019387' => 'vpl', 'HPP92_024038' => 'vpl', 'Hund05891' => 'sun', 'Hund06450' => 'sun', 'Hund12053' => 'sun', 'Hund16800' => 'sun', 'Hund21222' => 'sun', 'Hund22896' => 'sun', 'Hund23746' => 'sun', 'Hund27083' => 'sun', 'Lalb_Chr02g0141831' => 'lal', 'Lalb_Chr02g0141841' => 'lal', 'Lalb_Chr05g0220411' => 'lal', 'Lalb_Chr06g0162081' => 'lal', 'Lalb_Chr09g0327651' => 'lal', 'Lalb_Chr13g0295051' => 'lal', 'Lalb_Chr15g0086801' => 'lal', 'Lalb_Chr16g0383781' => 'lal', 'Lalb_Chr16g0383791' => 'lal', 'Lalb_Chr18g0055441' => 'lal', 'Lalb_Chr18g0059611' => 'lal', 'Lalb_Chr20g0109661' => 'lal', 'Lalb_Chr20g0109831' => 'lal', 'Lalb_Chr20g0121871' => 'lal', 'Lalb_Chr22g0355361' => 'lal', 'Lalb_Chr25g0286371' => 'lal', 'Lj1A1187G43' => 'lonja', 'Lj1A1205T50' => 'lonja', 'Lj1A800G33' => 'lonja', 'Lj1C1187T7' => 'lonja', 'Lj1C843T11' => 'lonja', 'Lj1g0010940' => 'lja', 'Lj2A288T69' => 'lonja', 'Lj3g0024276' => 'lja', 'Lj4A47T76' => 'lonja', 'Lj4g0005805' => 'lja', 'Lj4g0006097' => 'lja', 'Lj4g0008528' => 'lja', 'Lj4g0024907' => 'lja', 'Lj5g0012472' => 'lja', 'Lj5g0018648' => 'lja', 'Lj6C789G1' => 'lonja', 'Lj6g0004000' => 'lja', 'Lj7A292G67' => 'lonja', 'Lj7A292T64' => 'lonja', 'Lj9A400T58' => 'lonja', 'Lsat_1_v5_gn_1_126181' => 'lsa', 'Lsat_1_v5_gn_4_123041' => 'lsa', 'Lsat_1_v5_gn_4_133620' => 'lsa', 'Lsat_1_v5_gn_4_53221' => 'lsa', 'Lsat_1_v5_gn_4_71961' => 'lsa', 'Lsat_1_v5_gn_7_105241' => 'lsa', 'Lsat_1_v5_gn_7_21361' => 'lsa', 'Lsat_1_v5_gn_7_28860' => 'lsa', 'Lsat_1_v5_gn_7_31260' => 'lsa', 'Lsat_1_v5_gn_8_52801' => 'lsa', 'Manes.02G191400' => 'mes', 'Manes.03G110100' => 'mes', 'Manes.04G071100' => 'mes', 'Manes.05G100500' => 'mes', 'Manes.05G164700' => 'mes', 'Manes.15G087000' => 'mes', 'Manes.15G121500' => 'mes', 'Manes.16G028300' => 'mes', 'Manes.17G046100' => 'mes', 'Manes.17G069800' => 'mes', 'Manes.18G100500' => 'mes', 'Mapoly0002s0109' => 'mpo', 'Mapoly0024s0007' => 'mpo', 'Mapoly0089s0032' => 'mpo', 'MBI04_g42241_MAGBIO' => 'mbi', 'MBI05_g11988_MAGBIO' => 'mbi', 'MBI05_g35452_MAGBIO' => 'mbi', 'MBI07_g30179_MAGBIO' => 'mbi', 'MBI07_g35859_MAGBIO' => 'mbi', 'MBI07_g35860_MAGBIO' => 'mbi', 'MBI07_g37166_MAGBIO' => 'mbi', 'MBI08_g18172_MAGBIO' => 'mbi', 'MBI09_g08441_MAGBIO' => 'mbi', 'MBI13_g01676_MAGBIO' => 'mbi', 'MBI14_g42955_MAGBIO' => 'mbi', 'MBI16_g13161_MAGBIO' => 'mbi', 'MBI17_g27204_MAGBIO' => 'mbi', 'MBI19_g21595_MAGBIO' => 'mbi', 'MD00G1148400' => 'mdo', 'MD02G1301200' => 'mdo', 'MD03G1227800' => 'mdo', 'MD05G1041100' => 'mdo', 'MD05G1124800' => 'mdo', 'MD05G1284000' => 'mdo', 'MD05G1338800' => 'mdo', 'MD05G1338900' => 'mdo', 'MD07G1022800' => 'mdo', 'MD10G1047500' => 'mdo', 'MD10G1127500' => 'mdo', 'MD10G1262300' => 'mdo', 'MD10G1293800' => 'mdo', 'MD16G1074300' => 'mdo', 'Medtr1g021670' => 'mtr', 'Medtr1g096320' => 'mtr', 'Medtr2g013690' => 'mtr', 'Medtr2g019450' => 'mtr', 'Medtr2g085170' => 'mtr', 'Medtr4g088785' => 'mtr', 'Medtr8g055930' => 'mtr', 'Medtr8g085850' => 'mtr', 'MELO3C002605.2' => 'cme', 'MELO3C003891.2' => 'cme', 'MELO3C004012.2' => 'cme', 'MELO3C007134.2' => 'cme', 'MELO3C008118.2' => 'cme', 'MELO3C016700.2' => 'cme', 'MELO3C024127.2' => 'cme', 'MELO3C033361.2' => 'cme', 'MELO3C033362.2' => 'cme', 'Migut.C00430' => 'egut', 'Migut.C01246' => 'egut', 'Migut.E00101' => 'egut', 'Migut.H01486' => 'egut', 'Migut.H01939' => 'egut', 'Migut.K00360' => 'egut', 'Migut.M00910' => 'egut', 'Migut.M01139' => 'egut', 'Migut.N02677' => 'egut', 'MSTRG.13252' => 'ama', 'MSTRG.14701' => 'ama', 'MSTRG.1521' => 'ama', 'MSTRG.15884' => 'ama', 'MSTRG.16242' => 'ama', 'MSTRG.22285' => 'ama', 'MSTRG.22444' => 'ama', 'MSTRG.2349' => 'ama', 'MSTRG.26308' => 'ama', 'MSTRG.28296' => 'ama', 'MSTRG.9895' => 'ama', 'Nitab4.5_0000110g0060' => 'nta', 'Nitab4.5_0000420g0130' => 'nta', 'Nitab4.5_0000422g0030' => 'nta', 'Nitab4.5_0000560g0180' => 'nta', 'Nitab4.5_0000703g0100' => 'nta', 'Nitab4.5_0000786g0200' => 'nta', 'Nitab4.5_0001336g0020' => 'nta', 'Nitab4.5_0001796g0030' => 'nta', 'Nitab4.5_0003348g0060' => 'nta', 'Nitab4.5_0003698g0040' => 'nta', 'Nitab4.5_0003942g0090' => 'nta', 'Nitab4.5_0004775g0070' => 'nta', 'Nitab4.5_0004864g0030' => 'nta', 'Nitab4.5_0005615g0020' => 'nta', 'Nitab4.5_0009288g0030' => 'nta', 'Nitab4.5_0009341g0010' => 'nta', 'Nitab4.5_0009535g0010' => 'nta', 'Nn1g03995' => 'nnu', 'Nn1g04100' => 'nnu', 'Nn1g06530' => 'nnu', 'Nn3g16404' => 'nnu', 'Nn3g17212' => 'nnu', 'Nn3g20776' => 'nnu', 'Nn3g21923' => 'nnu', 'Nn5g27737' => 'nnu', 'Nn5g29461' => 'nnu', 'Nn7g38355' => 'nnu', 'Nn8g39873' => 'nnu', 'Oeu000548.2' => 'oeu', 'Oeu004672.1' => 'oeu', 'Oeu015605.2' => 'oeu', 'Oeu016092.1' => 'oeu', 'Oeu017879.3' => 'oeu', 'Oeu024910.1' => 'oeu', 'Oeu028965.1' => 'oeu', 'Oeu031269.1' => 'oeu', 'Oeu031270.1' => 'oeu', 'Oeu032535.1' => 'oeu', 'Oeu034151.1' => 'oeu', 'Oeu034152.1' => 'oeu', 'Oeu034588.2' => 'oeu', 'Oeu050846.1' => 'oeu', 'Oeu050849.2' => 'oeu', 'Oeu051063.2' => 'oeu', 'Oeu052368.1' => 'oeu', 'Oeu052370.1' => 'oeu', 'Os01g0210400' => 'osa', 'Os01g0304300' => 'osa', 'Os01g0749100' => 'osa', 'Os02g0745800' => 'osa', 'Os03g0769050' => 'osa', 'Os05g0531500' => 'osa', 'Os06g0724300' => 'osa', 'Os11g0198100' => 'osa', 'Peaxi162Scf00069g01425' => 'pax', 'Peaxi162Scf00280g00811' => 'pax', 'Peaxi162Scf00310g00615' => 'pax', 'Peaxi162Scf00362g00542' => 'pax', 'Peaxi162Scf00461g00310' => 'pax', 'Peaxi162Scf00530g00118' => 'pax', 'Peaxi162Scf00541g00057' => 'pax', 'Peaxi162Scf00661g00017' => 'pax', 'Peaxi162Scf00926g00027' => 'pax', 'Peaxi162Scf01064g00263' => 'pax', 'Peaxi162Scf01211g00135' => 'pax', 'PGR004G2336' => 'pgr', 'PGR042G0327' => 'pgr', 'PGR042G1957' => 'pgr', 'PGR042G2003' => 'pgr', 'PGR042G3929' => 'pgr', 'PGR083G1137' => 'pgr', 'PGR083G1364' => 'pgr', 'PGSC0003DMG400003381' => 'stu', 'PGSC0003DMG400003417' => 'stu', 'PGSC0003DMG400008981' => 'stu', 'PGSC0003DMG400012417' => 'stu', 'PGSC0003DMG400012823' => 'stu', 'PGSC0003DMG400016885' => 'stu', 'PGSC0003DMG400022812' => 'stu', 'PGSC0003DMG400029726' => 'stu', 'PGSC0003DMG401009243' => 'stu', 'PGSC0003DMG401031505' => 'stu', 'PGSC0003DMG402031505' => 'stu', 'Phvul.001G017600' => 'pvu', 'Phvul.002G193500' => 'pvu', 'Phvul.002G228900' => 'pvu', 'Phvul.002G236800' => 'pvu', 'Phvul.003G049500' => 'pvu', 'Phvul.005G072000' => 'pvu', 'Phvul.006G164800' => 'pvu', 'Phvul.006G185100' => 'pvu', 'Phvul.007G090000' => 'pvu', 'Potri.001G399800' => 'ptr', 'Potri.002G149900' => 'ptr', 'Potri.004G044100' => 'ptr', 'Potri.004G177600' => 'ptr', 'Potri.009G138000' => 'ptr', 'Potri.010G094000' => 'ptr', 'Potri.011G053000' => 'ptr', 'Potri.011G119300' => 'ptr', 'Potri.013G113700' => 'ptr', 'Potri.018G107800' => 'ptr', 'Potri.019G084100' => 'ptr', 'Pp3c14_23720' => 'ppa', 'Pp3c16_6340' => 'ppa', 'Pp3c23_13420' => 'ppa', 'Pp3c24_2740' => 'ppa', 'Pp3c25_860' => 'ppa', 'Pp3c8_21750' => 'ppa', 'Prupe.1G273000' => 'ppe', 'Prupe.1G273700' => 'ppe', 'Prupe.1G274100' => 'ppe', 'Prupe.2G023300' => 'ppe', 'Prupe.4G048000' => 'ppe', 'Prupe.4G080400' => 'ppe', 'Prupe.4G181200' => 'ppe', 'Prupe.8G056900' => 'ppe', 'Prupe.8G168700' => 'ppe', 'Psat1g189080' => 'psa', 'Psat1g204760' => 'psa', 'Psat4g175560' => 'psa', 'Psat4g177720' => 'psa', 'Psat5g244240' => 'psa', 'Psat6g010720' => 'psa', 'Psat6g187200' => 'psa', 'Psat7g072040' => 'psa', 'PSO017G3501' => 'pso', 'PSO063G2148' => 'pso', 'PSO063G5608' => 'pso', 'PSO210G6392' => 'pso', 'PSO541G2319' => 'pso', 'PSO541G2836' => 'pso', 'PSO541G4012' => 'pso', 'PSO541G6253' => 'pso', 'PSO675G0580' => 'pso', 'PSO675G0856' => 'pso', 'PSO675G5635' => 'pso', 'PSO675G9157' => 'pso', 'PSO832G1660' => 'pso', 'PSO832G1969' => 'pso', 'QL02p007186' => 'qlo', 'QL02p033904' => 'qlo', 'QL03p064391' => 'qlo', 'QL05p040593' => 'qlo', 'QL05p058242' => 'qlo', 'QL08p021825' => 'qlo', 'QL11p004981' => 'qlo', 'RcHm_v2.0_Chr1g0318301' => 'rch', 'RcHm_v2.0_Chr4g0418501' => 'rch', 'RcHm_v2.0_Chr4g0439971' => 'rch', 'RcHm_v2.0_Chr5g0008541' => 'rch', 'RcHm_v2.0_Chr5g0014101' => 'rch', 'RcHm_v2.0_Chr5g0014131' => 'rch', 'RcHm_v2.0_Chr5g0033621' => 'rch', 'RcHm_v2.0_Chr6g0272041' => 'rch', 'RcHm_v2.0_Chr6g0278831' => 'rch', 'Rhsim02G0130400' => 'rsi', 'Rhsim02G0171100' => 'rsi', 'Rhsim05G0053000' => 'rsi', 'Rhsim05G0053100' => 'rsi', 'Rhsim06G0096500' => 'rsi', 'Rhsim06G0096600' => 'rsi', 'Rhsim06G0199100' => 'rsi', 'Rhsim12G0062300' => 'rsi', 'Rhsim12G0062800' => 'rsi', 'Sabra02G0118600' => 'sbr', 'Sabra04G0027300' => 'sbr', 'Sabra04G0119500' => 'sbr', 'Sabra08G0112500' => 'sbr', 'Sabra11G0036800' => 'sbr', 'Sabra11G0103800' => 'sbr', 'Sabra13G0096300' => 'sbr', 'Sabra16G0262300' => 'sbr', 'Sabra18G0091700' => 'sbr', 'Sabra19G0095400' => 'sbr', 'SalBow6G3080' => 'sbo', 'SalBow7G1157' => 'sbo', 'SalBow7G2123' => 'sbo', 'SalBow7G2285' => 'sbo', 'SalBow7G3537' => 'sbo', 'SalBow8G2947' => 'sbo', 'SalBow8G4463' => 'sbo', 'SalBow8G5466' => 'sbo', 'Sc01g0001750' => 'sci', 'Sc02g0006640' => 'sci', 'Sc02g0006670' => 'sci', 'Sc04g0008220' => 'sci', 'Sc05g0006190' => 'sci', 'Sc08g0002760' => 'sci', 'Sc17g0006170' => 'sci', 'Sc22g0002050' => 'sci', 'Sc23g0001190' => 'sci', 'Sc24g0000980' => 'sci', 'Sed0006245' => 'sed', 'Sed0007543' => 'sed', 'Sed0009411' => 'sed', 'Sed0010765' => 'sed', 'Sed0012944' => 'sed', 'Sed0014682' => 'sed', 'Sed0016174' => 'sed', 'Sed0016796' => 'sed', 'Sed0020317' => 'sed', 'Sed0021467' => 'sed', 'SEGI_01316' => 'sgi', 'SEGI_03374' => 'sgi', 'SEGI_16265' => 'sgi', 'SEGI_18569' => 'sgi', 'SEGI_20351' => 'sgi', 'SEGI_26395' => 'sgi', 'SEGI_29469' => 'sgi', 'SEGI_34771' => 'sgi', 'SEGI_36769' => 'sgi', 'SEGI_37139' => 'sgi', 'SGA_v2.0_scaffold100G29687' => 'sas', 'SGA_v2.0_scaffold118G32472' => 'sas', 'SGA_v2.0_scaffold14G07051' => 'sas', 'SGA_v2.0_scaffold183G39845' => 'sas', 'SGA_v2.0_scaffold1G00174' => 'sas', 'SGA_v2.0_scaffold22G09714' => 'sas', 'SGA_v2.0_scaffold333G48992' => 'sas', 'SGA_v2.0_scaffold46G17491' => 'sas', 'SGA_v2.0_scaffold49G18294' => 'sas', 'SGA_v2.0_scaffold63G21658' => 'sas', 'SHI01741' => 'shi', 'SHI05771' => 'shi', 'SHI18077' => 'shi', 'SHI20525' => 'shi', 'SHI20527' => 'shi', 'SHI20528' => 'shi', 'SMO172G0185' => 'smo', 'SMO198G0020' => 'smo', 'SMO351G0006' => 'smo', 'SMO356G0118' => 'smo', 'SMO358G0296' => 'smo', 'SMO367G0079' => 'smo', 'SMO367G1277' => 'smo', 'Solyc01g014220.3' => 'sly', 'Solyc01g111770.2' => 'sly', 'Solyc02g078180.3' => 'sly', 'Solyc03g006430.3' => 'sly', 'Solyc03g006456.1' => 'sly', 'Solyc03g079860.2' => 'sly', 'Solyc04g079770.3' => 'sly', 'Solyc05g007430.4' => 'sly', 'Solyc07g063150.3' => 'sly', 'Solyc08g016620.3' => 'sly', 'Solyc09g057590.3' => 'sly', 'Solyc09g057600.1' => 'sly', 'Solyc10g009050.3' => 'sly', 'Solyc11g017420.2' => 'sly', 'Sopen01g053810' => 'spe', 'Sopen02g023040' => 'spe', 'Sopen03g002440' => 'spe', 'Sopen04g033350' => 'spe', 'Sopen05g003310' => 'spe', 'Sopen07g004050' => 'spe', 'Sopen07g031340' => 'spe', 'Sopen08g006990' => 'spe', 'Sopen10g004830' => 'spe', 'Sopen11g009370' => 'spe', 'Sp1g24450' => 'spa', 'Sp1g29670' => 'spa', 'Sp1g39600' => 'spa', 'Sp2g11080' => 'spa', 'Sp2g13970' => 'spa', 'Sp4g16130' => 'spa', 'Sp6g13080' => 'spa', 'Sp7g37270' => 'spa', 'TAR371G0065' => 'tar', 'TAR376G0340' => 'tar', 'TAR376G0435' => 'tar', 'TAR381G0002' => 'tar', 'TAR381G1236' => 'tar', 'TAR624G0055' => 'tar', 'TAR624G0324' => 'tar', 'TAR624G0696' => 'tar', 'TAR624G0906' => 'tar', 'TAR625G0107' => 'tar', 'TAR626G0015' => 'tar', 'TAR626G1356' => 'tar', 'TAR627G0888' => 'tar', 'TAR628G0399' => 'tar', 'TAR628G1327' => 'tar', 'TAR629G2831' => 'tar', 'TAR629G2874' => 'tar', 'TAR633G1432' => 'tar', 'TAR633G2771' => 'tar', 'THA.LOC104803394' => 'tha', 'THA.LOC104805153' => 'tha', 'THA.LOC104806784' => 'tha', 'THA.LOC104810473' => 'tha', 'THA.LOC104813100' => 'tha', 'THA.LOC104814215' => 'tha', 'THA.LOC104815554' => 'tha', 'THA.LOC104820544' => 'tha', 'THA.LOC104824754' => 'tha', 'THA.LOC104827717' => 'tha', 'Thecc.02G031400' => 'tca', 'Thecc.02G055900' => 'tca', 'Thecc.02G350800' => 'tca', 'Thecc.06G150900' => 'tca', 'Thecc.06G186600' => 'tca', 'Thecc.07G089600' => 'tca', 'Thecc.08G020400' => 'tca', 'Thecc.08G182100' => 'tca', 'Thhalv10000873m.g' => 'esa', 'Thhalv10004185m.g' => 'esa', 'Thhalv10006981m.g' => 'esa', 'Thhalv10007204m.g' => 'esa', 'Thhalv10011374m.g' => 'esa', 'Thhalv10013482m.g' => 'esa', 'Thhalv10017801m.g' => 'esa', 'Thhalv10024983m.g' => 'esa', 'TPR.G12072' => 'tpr', 'TPR.G15769' => 'tpr', 'TPR.G16504' => 'tpr', 'TPR.G16506' => 'tpr', 'TPR.G24345' => 'tpr', 'TPR.G26666' => 'tpr', 'TPR.G27320' => 'tpr', 'TPR.G31819' => 'tpr', 'TPR.G38879' => 'tpr', 'TPR.G39015' => 'tpr', 'TPR.G8819' => 'tpr', 'TWI09G0924' => 'twi', 'TWI12G0811' => 'twi', 'TWI12G1294' => 'twi', 'TWI31G0150' => 'twi', 'TWI36G1262' => 'twi', 'TWI38G1287' => 'twi', 'TWI38G1633' => 'twi', 'TWI38G1982' => 'twi', 'TWI39G0116' => 'twi', 'TWI60G1011' => 'twi', 'TWI63G0171' => 'twi', 'TWI73G0839' => 'twi', 'TWI79G1511' => 'twi', 'unitig_0.g915' => 'ugi', 'unitig_0.g916' => 'ugi', 'unitig_21.g20219' => 'ugi', 'unitig_21.g20416' => 'ugi', 'unitig_578.g16132' => 'ugi', 'unitig_578.g16718' => 'ugi', 'unitig_62.g23481' => 'ugi', 'unitig_744.g24535' => 'ugi', 'unitig_749.g13525' => 'ugi', 'vmacro01248' => 'vma', 'vmacro02290' => 'vma', 'vmacro10946' => 'vma', 'vmacro11865' => 'vma', 'vmacro12493' => 'vma', 'vmacro17322' => 'vma', 'vmacro21599' => 'vma', 'vmacro23041' => 'vma', 'VMungo0251G0004' => 'vmu', 'VMungo0251G2639' => 'vmu', 'VMungo0251G2967' => 'vmu', 'VMungo0540G0864' => 'vmu', 'VMungo0540G1569' => 'vmu', 'VMungo0647G0317' => 'vmu', 'VMungo0720G1373' => 'vmu', 'VMungo0720G1508' => 'vmu', 'VMungo1080G0485' => 'vmu', 'VMungo1215G3177' => 'vmu', 'Zm00001eb112600' => 'zma', 'Zm00001eb120220' => 'zma', 'Zm00001eb153240' => 'zma', 'Zm00001eb168880' => 'zma', 'Zm00001eb213920' => 'zma', 'Zm00001eb228280' => 'zma', 'Zm00001eb254580' => 'zma', 'Zm00001eb272180' => 'zma', 'Zm00001eb293190' => 'zma', 'Zm00001eb322930' => 'zma', 'Zm00001eb353360' => 'zma', 'Zm00001eb353390' => 'zma', 'Zm00001eb353430' => 'zma', 'Zm00001eb353440' => 'zma', 'Zm00001eb353780' => 'zma' ), 'gf_id' => 'HOM05D000499', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000499' ), 'data_identifier' => 'HOM05D000499', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000499', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1066', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p29780' => 'bna', 'A02p33180' => 'bna', 'A03p16470' => 'bna', 'A03p66010' => 'bna', 'A04p25970' => 'bna', 'A06p01270' => 'bna', 'A06p46080' => 'bna', 'A07p11400' => 'bna', 'A08p01840' => 'bna', 'A08p08230' => 'bna', 'A08p25740' => 'bna', 'A09p32070' => 'bna', 'A09p37830' => 'bna', 'A09p42840' => 'bna', 'A09p42850' => 'bna', 'Aa31LG10G2060' => 'aar', 'Aa31LG2G7410' => 'aar', 'Aa31LG6G10200' => 'aar', 'Aa31LG6G16680' => 'aar', 'Aa31LG6G8470' => 'aar', 'Aa31LG9G12730' => 'aar', 'Aa31LG9G13680' => 'aar', 'Aa31LG9G14920' => 'aar', 'Aa31LG9G6650' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4977' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5467' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3254' => 'aag', 'Actinidia02578' => 'ach', 'Actinidia07693' => 'ach', 'Actinidia08413' => 'ach', 'Actinidia08414' => 'ach', 'Actinidia15289' => 'ach', 'Actinidia19871' => 'ach', 'Actinidia21475' => 'ach', 'Actinidia22576' => 'ach', 'Actinidia28327' => 'ach', 'Actinidia32491' => 'ach', 'Actinidia39463' => 'ach', 'Actinidia39571' => 'ach', 'Ah.01g013750' => 'amhyb', 'Ah.01g023210' => 'amhyb', 'Ah.04g164850' => 'amhyb', 'Ah.05g178060' => 'amhyb', 'Ah.07g204270' => 'amhyb', 'Ah.07g208480' => 'amhyb', 'Ah.09g237410' => 'amhyb', 'Ah.14g089460' => 'amhyb', 'AL1G41790' => 'aly', 'AL1G49050' => 'aly', 'AL1G53810' => 'aly', 'AL1G61400' => 'aly', 'AL4G18580' => 'aly', 'AL5G12510' => 'aly', 'AL5G12540' => 'aly', 'AL6G43230' => 'aly', 'AL7G10370' => 'aly', 'AL7G19250' => 'aly', 'AL8G12240' => 'aly', 'AL8G18540' => 'aly', 'Aqoxy1G02409' => 'aox', 'Aqoxy2G03993' => 'aox', 'Aqoxy3G03357' => 'aox', 'Aqoxy4G00785' => 'aox', 'Aqoxy5G02598' => 'aox', 'Aqoxy6G00132' => 'aox', 'Aqoxy7G01776' => 'aox', 'Aqoxy7G02316' => 'aox', 'Aqoxy7G03973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.12AFKW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B8730' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27IQR1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3F75VG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3RE0GA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41TCQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.527VTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FIR39' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5W8UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DA38EV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ63HS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H1I32C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HC27T5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4M8AP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7N3CZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9UVDZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LS1NQA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT1D4B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SKC4TM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCFV76' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF9Q1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQWD9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1ZM88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WE07RT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YCK7VH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJE6Q6' => 'arhy', 'AT1G28240' => 'ath', 'AT1G34550' => 'ath', 'AT1G53040' => 'ath', 'AT2G02910' => 'ath', 'AT4G09630' => 'ath', 'AT4G38500' => 'ath', 'AT5G42660' => 'ath', 'AT5G46220' => 'ath', 'ATR0152G026' => 'atr', 'ATR0564G343' => 'atr', 'ATR0706G151' => 'atr', 'ATR0733G207' => 'atr', 'ATR0751G234' => 'atr', 'ATR0807G048' => 'atr', 'ATR1091G084' => 'atr', 'Atru.chr10.1229' => 'acertr', 'Atru.chr10.1230' => 'acertr', 'Atru.chr10.1874' => 'acertr', 'Atru.chr11.1808' => 'acertr', 'Atru.chr13.1795' => 'acertr', 'Atru.chr13.570' => 'acertr', 'Atru.chr2.2608' => 'acertr', 'Atru.chr2.2609' => 'acertr', 'Atru.chr5.3428' => 'acertr', 'Atru.chr8.1171' => 'acertr', 'AUR62004651' => 'cqu', 'AUR62008675' => 'cqu', 'AUR62010014' => 'cqu', 'AUR62013004' => 'cqu', 'AUR62014825' => 'cqu', 'AUR62015015' => 'cqu', 'AUR62015151' => 'cqu', 'AUR62017020' => 'cqu', 'AUR62019422' => 'cqu', 'AUR62023570' => 'cqu', 'AUR62025571' => 'cqu', 'AUR62029098' => 'cqu', 'AUR62033863' => 'cqu', 'AUR62034296' => 'cqu', 'AUR62040075' => 'cqu', 'BcaB02g07334' => 'bca', 'BcaB02g10575' => 'bca', 'BcaB03g12119' => 'bca', 'BcaB03g12120' => 'bca', 'BcaB03g13945' => 'bca', 'BcaB04g17123' => 'bca', 'BcaB04g17867' => 'bca', 'BcaB04g19839' => 'bca', 'BcaB07g30317' => 'bca', 'BcaB07g32432' => 'bca', 'BcaB07g33362' => 'bca', 'BcaB08g36611' => 'bca', 'BcaC01g00028' => 'bca', 'BcaC01g01356' => 'bca', 'BcaC01g02034' => 'bca', 'BcaC01g06051' => 'bca', 'BcaC03g16839' => 'bca', 'BcaC03g17176' => 'bca', 'BcaC05g26829' => 'bca', 'BcaC06g31490' => 'bca', 'BcaC06g35344' => 'bca', 'BcaC06g36570' => 'bca', 'BcaC07g37537' => 'bca', 'BcaC08g43491' => 'bca', 'BcaC08g43773' => 'bca', 'BcaNung00234' => 'bca', 'BcaNung01982' => 'bca', 'BcaNung03707' => 'bca', 'BcaNung06454' => 'bca', 'BolC2t10762H' => 'bol', 'BolC2t11191H' => 'bol', 'BolC3t14322H' => 'bol', 'BolC3t19747H' => 'bol', 'BolC3t21425H' => 'bol', 'BolC4t27800H' => 'bol', 'BolC5t31423H' => 'bol', 'BolC6t35951H' => 'bol', 'BolC6t36282H' => 'bol', 'BolC7t40678H' => 'bol', 'BolC7t40679H' => 'bol', 'BolC7t42222H' => 'bol', 'BolC7t43492H' => 'bol', 'BolC7t46785H' => 'bol', 'BolC8t47853H' => 'bol', 'BolC9t56805H' => 'bol', 'BraA02t08000Z' => 'bra', 'BraA02t08341Z' => 'bra', 'BraA03t10936Z' => 'bra', 'BraA03t15657Z' => 'bra', 'BraA04t18100Z' => 'bra', 'BraA05t20523Z' => 'bra', 'BraA06t23353Z' => 'bra', 'BraA06t27473Z' => 'bra', 'BraA06t27769Z' => 'bra', 'BraA07t28928Z' => 'bra', 'BraA08t32236Z' => 'bra', 'BraA08t32841Z' => 'bra', 'BraA08t34524Z' => 'bra', 'BraA09t38742Z' => 'bra', 'BraA09t39295Z' => 'bra', 'C02p47180' => 'bna', 'C02p50990' => 'bna', 'C03p19360' => 'bna', 'C03p74950' => 'bna', 'C03p91000' => 'bna', 'C04p63260' => 'bna', 'C05p27050' => 'bna', 'C06p08750' => 'bna', 'C06p11490' => 'bna', 'C07p02820' => 'bna', 'C07p17180' => 'bna', 'C07p29440' => 'bna', 'C07p63730' => 'bna', 'C09p39260' => 'bna', 'CAN.G1164.34' => 'can', 'CAN.G1164.39' => 'can', 'CAN.G1530.3' => 'can', 'CAN.G162.61' => 'can', 'CAN.G176.6' => 'can', 'CAN.G289.49' => 'can', 'CAN.G370.21' => 'can', 'CAN.G370.22' => 'can', 'CAN.G371.117' => 'can', 'CAN.G58.37' => 'can', 'CAN.G588.98' => 'can', 'CANSAT21G2266' => 'cansat', 'CANSAT25G2799' => 'cansat', 'CANSAT35G0862' => 'cansat', 'CANSAT35G1704' => 'cansat', 'CANSAT35G1760' => 'cansat', 'CANSAT56G3971' => 'cansat', 'CANSAT56G4116' => 'cansat', 'CANSAT80G1259' => 'cansat', 'CARHR027730' => 'chi', 'CARHR033880' => 'chi', 'CARHR043270' => 'chi', 'CARHR145330' => 'chi', 'CARHR145340' => 'chi', 'CARHR175570' => 'chi', 'CARHR181570' => 'chi', 'CARHR258470' => 'chi', 'CARHR260490' => 'chi', 'CARHR294220' => 'chi', 'Carub.0001s2668' => 'cru', 'Carub.0001s3257' => 'cru', 'Carub.0001s4220' => 'cru', 'Carub.0005s0179' => 'cru', 'Carub.0006s2807' => 'cru', 'Carub.0007s0039' => 'cru', 'Carub.0008s0169' => 'cru', 'Carub.0008s0636' => 'cru', 'Ca_00338_v3' => 'car', 'Ca_00542_v3' => 'car', 'Ca_01844_v3' => 'car', 'Ca_10611_v3' => 'car', 'Ca_13326_v3' => 'car', 'Ca_17944_v3' => 'car', 'Ca_18546_v3' => 'car', 'Ca_24219_v3' => 'car', 'Ca_29972_v3' => 'car', 'CBR_g3681' => 'cbr', 'CBR_g40021' => 'cbr', 'Cc01_g08140' => 'ccan', 'Cc02_g13410' => 'ccan', 'Cc02_g37480' => 'ccan', 'Cc05_g12030' => 'ccan', 'Cc09_g03370' => 'ccan', 'Cc09_g10300' => 'ccan', 'Cc10_g03530' => 'ccan', 'Cc10_g11380' => 'ccan', 'CDE01G0176' => 'cde', 'CDE02G0675' => 'cde', 'CDE02G0942' => 'cde', 'CDE02G1153' => 'cde', 'CDE02G4177' => 'cde', 'CDE04G2117' => 'cde', 'CDE04G2736' => 'cde', 'CDE08G1161' => 'cde', 'CDE09G1238' => 'cde', 'Cfa000467' => 'cfa', 'Cfa000947' => 'cfa', 'Cfa004969' => 'cfa', 'Cfa005284' => 'cfa', 'Cfa008993' => 'cfa', 'Cfa018187' => 'cfa', 'Cfa018454' => 'cfa', 'Cfa020585' => 'cfa', 'Ciclev10000424m.g' => 'ccl', 'Ciclev10003605m.g' => 'ccl', 'Ciclev10007828m.g' => 'ccl', 'Ciclev10014620m.g' => 'ccl', 'Ciclev10015169m.g' => 'ccl', 'Ciclev10018291m.g' => 'ccl', 'Ciclev10028256m.g' => 'ccl', 'Ciclev10033822m.g' => 'ccl', 'CiPaw.05G060300' => 'cil', 'CiPaw.05G085000' => 'cil', 'CiPaw.06G083700' => 'cil', 'CiPaw.06G120300' => 'cil', 'CiPaw.09G060500' => 'cil', 'CiPaw.09G123800' => 'cil', 'CiPaw.11G169700' => 'cil', 'CiPaw.12G118300' => 'cil', 'CiPaw.15G071000' => 'cil', 'CiPaw.15G081900' => 'cil', 'ClCG01G024610' => 'cla', 'ClCG03G006070' => 'cla', 'ClCG05G019250' => 'cla', 'ClCG09G009500' => 'cla', 'ClCG11G008200' => 'cla', 'ClCG11G018080' => 'cla', 'COL.COLO4_17373' => 'col', 'COL.COLO4_22994' => 'col', 'COL.COLO4_26389' => 'col', 'COL.COLO4_27170' => 'col', 'COL.COLO4_31074' => 'col', 'COL.COLO4_31465' => 'col', 'COL.COLO4_36438' => 'col', 'COL.COLO4_36439' => 'col', 'Cpa.g.c38781' => 'cpa', 'Cpa.g.sc128.12' => 'cpa', 'Cpa.g.sc166.7' => 'cpa', 'Cpa.g.sc166.8' => 'cpa', 'Cpa.g.sc20.111' => 'cpa', 'Cpa.g.sc27.31' => 'cpa', 'Cpa.g.sc64.36' => 'cpa', 'Cpa.g.sc64.37' => 'cpa', 'Cpa.g.sc66.49' => 'cpa', 'Cpa.g.sc80.64' => 'cpa', 'CsaV3_1G012320' => 'csa', 'CsaV3_2G008480' => 'csa', 'CsaV3_2G033450' => 'csa', 'CsaV3_3G044830' => 'csa', 'CsaV3_4G033710' => 'csa', 'CsaV3_6G051730' => 'csa', 'CsaV3_7G025350' => 'csa', 'CSS0001067' => 'camsi', 'CSS0005996' => 'camsi', 'CSS0006590' => 'camsi', 'CSS0009673' => 'camsi', 'CSS0010201' => 'camsi', 'CSS0010549' => 'camsi', 'CSS0011364' => 'camsi', 'CSS0014473' => 'camsi', 'CSS0014961' => 'camsi', 'CSS0020191' => 'camsi', 'CSS0021165' => 'camsi', 'CSS0022306' => 'camsi', 'CSS0030591' => 'camsi', 'CSS0030696' => 'camsi', 'CSS0032653' => 'camsi', 'CSS0037487' => 'camsi', 'CSS0041102' => 'camsi', 'CSS0041261' => 'camsi', 'CSS0046246' => 'camsi', 'CSS0049256' => 'camsi', 'DCAR_004075' => 'dca', 'DCAR_011538' => 'dca', 'DCAR_019553' => 'dca', 'DCAR_020952' => 'dca', 'DCAR_021739' => 'dca', 'DCAR_027407' => 'dca', 'DCAR_027913' => 'dca', 'DCAR_028066' => 'dca', 'Dinv05899' => 'din', 'Dinv07563' => 'din', 'Dinv08010' => 'din', 'Dinv14125' => 'din', 'Dinv20172' => 'din', 'Dinv30743' => 'din', 'Dinv31229' => 'din', 'Dinv34162' => 'din', 'Dinv36028' => 'din', 'Dinv39368' => 'din', 'Dinv40565' => 'din', 'Dinv41706' => 'din', 'Duzib052G0089' => 'dzi', 'Duzib116G0641' => 'dzi', 'Duzib132G0069' => 'dzi', 'Duzib132G1219' => 'dzi', 'Duzib147G0278' => 'dzi', 'Duzib160G0480' => 'dzi', 'Duzib170G0661' => 'dzi', 'Duzib177G0591' => 'dzi', 'Duzib187G1353' => 'dzi', 'Duzib192G0858' => 'dzi', 'Duzib192G0883' => 'dzi', 'Duzib213G0506' => 'dzi', 'Duzib235G0289' => 'dzi', 'Duzib251G0422' => 'dzi', 'ECA232G3898' => 'eca', 'ECA233G5950' => 'eca', 'ECA234G1699' => 'eca', 'ECA234G2421' => 'eca', 'ECA236G0426' => 'eca', 'ECA236G4331' => 'eca', 'ECA248G2573' => 'eca', 'EL10Ac1g00077' => 'bvu', 'EL10Ac1g01746' => 'bvu', 'EL10Ac2g03464' => 'bvu', 'EL10Ac4g08176' => 'bvu', 'EL10Ac7g17521' => 'bvu', 'EL10Ac8g20386' => 'bvu', 'EL10Ac9g21343' => 'bvu', 'EL10Ac9g22688' => 'bvu', 'Eucgr.B03434' => 'egr', 'Eucgr.D00618' => 'egr', 'Eucgr.E02395' => 'egr', 'Eucgr.F01129' => 'egr', 'Eucgr.F02622' => 'egr', 'Eucgr.F04207' => 'egr', 'FAN01G0570' => 'fan', 'FAN03G3351' => 'fan', 'FAN06G3702' => 'fan', 'FAN07G2149' => 'fan', 'FAN10G3758' => 'fan', 'FAN11G1170' => 'fan', 'FAN11G2050' => 'fan', 'FAN11G2724' => 'fan', 'FAN12G1700' => 'fan', 'FAN12G2028' => 'fan', 'FAN15G1160' => 'fan', 'FAN15G3063' => 'fan', 'FAN16G2540' => 'fan', 'FAN16G3077' => 'fan', 'FAN16G3624' => 'fan', 'FAN17G0221' => 'fan', 'FAN20G2492' => 'fan', 'FAN20G2905' => 'fan', 'FAN21G0548' => 'fan', 'FAN21G1300' => 'fan', 'FAN22G0077' => 'fan', 'FAN22G1315' => 'fan', 'FAN24G1280' => 'fan', 'FAN24G1445' => 'fan', 'FAN24G3527' => 'fan', 'FAN25G0464' => 'fan', 'FAN25G2885' => 'fan', 'FAN25G3270' => 'fan', 'FAN27G1101' => 'fan', 'FAN27G2846' => 'fan', 'FAN27G3524' => 'fan', 'FvH4_2g11770' => 'fve', 'FvH4_2g15630' => 'fve', 'FvH4_3g05570' => 'fve', 'FvH4_3g09110' => 'fve', 'FvH4_3g19940' => 'fve', 'FvH4_4g04821' => 'fve', 'FvH4_4g31480' => 'fve', 'FvH4_7g01740' => 'fve', 'Glyma.05G130400' => 'gma', 'Glyma.05G156400' => 'gma', 'Glyma.07G197000' => 'gma', 'Glyma.08G085151' => 'gma', 'Glyma.08G114500' => 'gma', 'Glyma.08G300400' => 'gma', 'Glyma.10G215800' => 'gma', 'Glyma.12G224400' => 'gma', 'Glyma.13G179300' => 'gma', 'Glyma.13G218151' => 'gma', 'Glyma.13G238800' => 'gma', 'Glyma.13G276900' => 'gma', 'Glyma.14G078200' => 'gma', 'Glyma.15G074500' => 'gma', 'Glyma.15G094100' => 'gma', 'Glyma.17G247200' => 'gma', 'Glyma.18G120100' => 'gma', 'Glyma.20G176000' => 'gma', 'Gohir.A01G063600' => 'ghi', 'Gohir.A01G170301' => 'ghi', 'Gohir.A02G060500' => 'ghi', 'Gohir.A05G133850' => 'ghi', 'Gohir.A05G161400' => 'ghi', 'Gohir.A06G012900' => 'ghi', 'Gohir.A06G035901' => 'ghi', 'Gohir.A06G127100' => 'ghi', 'Gohir.A06G210500' => 'ghi', 'Gohir.A08G008650' => 'ghi', 'Gohir.A09G072700' => 'ghi', 'Gohir.A09G088301' => 'ghi', 'Gohir.A10G040600' => 'ghi', 'Gohir.A12G036300' => 'ghi', 'Gohir.A12G143350' => 'ghi', 'Gohir.A12G165500' => 'ghi', 'Gohir.A13G145700' => 'ghi', 'Gohir.D01G050000' => 'ghi', 'Gohir.D01G051366' => 'ghi', 'Gohir.D01G161350' => 'ghi', 'Gohir.D02G065900' => 'ghi', 'Gohir.D05G164200' => 'ghi', 'Gohir.D05G355500' => 'ghi', 'Gohir.D06G010400' => 'ghi', 'Gohir.D06G111250' => 'ghi', 'Gohir.D06G132000' => 'ghi', 'Gohir.D06G210500' => 'ghi', 'Gohir.D07G165675' => 'ghi', 'Gohir.D08G062240' => 'ghi', 'Gohir.D08G086101' => 'ghi', 'Gohir.D08G138060' => 'ghi', 'Gohir.D09G072300' => 'ghi', 'Gohir.D10G041400' => 'ghi', 'Gohir.D11G191020' => 'ghi', 'Gohir.D11G212066' => 'ghi', 'Gohir.D12G036300' => 'ghi', 'Gohir.D12G168600' => 'ghi', 'Gohir.D13G150600' => 'ghi', 'Gorai.001G057300' => 'gra', 'Gorai.002G069900' => 'gra', 'Gorai.002G200000' => 'gra', 'Gorai.003G067600' => 'gra', 'Gorai.005G074800' => 'gra', 'Gorai.006G087300' => 'gra', 'Gorai.008G037500' => 'gra', 'Gorai.008G181400' => 'gra', 'Gorai.009G169400' => 'gra', 'Gorai.009G387900' => 'gra', 'Gorai.010G013300' => 'gra', 'Gorai.010G153800' => 'gra', 'Gorai.010G255800' => 'gra', 'Gorai.011G043700' => 'gra', 'Gorai.011G198900' => 'gra', 'Gorai.013G168400' => 'gra', 'GSVIVG01005212001' => 'vvi', 'GSVIVG01006163001' => 'vvi', 'GSVIVG01009625001' => 'vvi', 'GSVIVG01014338001' => 'vvi', 'GSVIVG01020005001' => 'vvi', 'GSVIVG01021450001' => 'vvi', 'GSVIVG01023975001' => 'vvi', 'GSVIVG01034490001' => 'vvi', 'HanXRQChr04g0112071' => 'han', 'HanXRQChr05g0131151' => 'han', 'HanXRQChr09g0262371' => 'han', 'HanXRQChr09g0268401' => 'han', 'HanXRQChr10g0279241' => 'han', 'HanXRQChr10g0297961' => 'han', 'HanXRQChr11g0326231' => 'han', 'HanXRQChr11g0328471' => 'han', 'HanXRQChr16g0507941' => 'han', 'HanXRQChr17g0560211' => 'han', 'Haze_02108' => 'cav', 'Haze_02428' => 'cav', 'Haze_05593' => 'cav', 'Haze_06448' => 'cav', 'Haze_09427' => 'cav', 'Haze_12022' => 'cav', 'Haze_17612' => 'cav', 'Haze_17928' => 'cav', 'Hma1.2p1_0032F.1_g019250' => 'hma', 'Hma1.2p1_0163F.1_g072690' => 'hma', 'Hma1.2p1_0265F.1_g106710' => 'hma', 'Hma1.2p1_0286F.1_g113970' => 'hma', 'Hma1.2p1_0363F.1_g136640' => 'hma', 'Hma1.2p1_0584F.1_g183470' => 'hma', 'Hma1.2p1_0885F.1_g232570' => 'hma', 'HPP92_006022' => 'vpl', 'HPP92_007320' => 'vpl', 'HPP92_011521' => 'vpl', 'HPP92_019387' => 'vpl', 'HPP92_024038' => 'vpl', 'Hund05891' => 'sun', 'Hund06450' => 'sun', 'Hund12053' => 'sun', 'Hund16800' => 'sun', 'Hund21222' => 'sun', 'Hund22896' => 'sun', 'Hund23746' => 'sun', 'Hund27083' => 'sun', 'Lalb_Chr02g0141831' => 'lal', 'Lalb_Chr02g0141841' => 'lal', 'Lalb_Chr05g0220411' => 'lal', 'Lalb_Chr06g0162081' => 'lal', 'Lalb_Chr09g0327651' => 'lal', 'Lalb_Chr13g0295051' => 'lal', 'Lalb_Chr15g0086801' => 'lal', 'Lalb_Chr16g0383781' => 'lal', 'Lalb_Chr16g0383791' => 'lal', 'Lalb_Chr18g0055441' => 'lal', 'Lalb_Chr18g0059611' => 'lal', 'Lalb_Chr20g0109661' => 'lal', 'Lalb_Chr20g0109831' => 'lal', 'Lalb_Chr20g0121871' => 'lal', 'Lalb_Chr22g0355361' => 'lal', 'Lalb_Chr25g0286371' => 'lal', 'Lj1A1187G43' => 'lonja', 'Lj1A1205T50' => 'lonja', 'Lj1A800G33' => 'lonja', 'Lj1C1187T7' => 'lonja', 'Lj1C843T11' => 'lonja', 'Lj1g0010940' => 'lja', 'Lj2A288T69' => 'lonja', 'Lj3g0024276' => 'lja', 'Lj4A47T76' => 'lonja', 'Lj4g0005805' => 'lja', 'Lj4g0006097' => 'lja', 'Lj4g0008528' => 'lja', 'Lj4g0024907' => 'lja', 'Lj5g0012472' => 'lja', 'Lj5g0018648' => 'lja', 'Lj6C789G1' => 'lonja', 'Lj6g0004000' => 'lja', 'Lj7A292G67' => 'lonja', 'Lj7A292T64' => 'lonja', 'Lj9A400T58' => 'lonja', 'Lsat_1_v5_gn_1_126181' => 'lsa', 'Lsat_1_v5_gn_4_123041' => 'lsa', 'Lsat_1_v5_gn_4_133620' => 'lsa', 'Lsat_1_v5_gn_4_53221' => 'lsa', 'Lsat_1_v5_gn_4_71961' => 'lsa', 'Lsat_1_v5_gn_7_105241' => 'lsa', 'Lsat_1_v5_gn_7_21361' => 'lsa', 'Lsat_1_v5_gn_7_28860' => 'lsa', 'Lsat_1_v5_gn_7_31260' => 'lsa', 'Lsat_1_v5_gn_8_52801' => 'lsa', 'Manes.02G191400' => 'mes', 'Manes.03G110100' => 'mes', 'Manes.04G071100' => 'mes', 'Manes.05G100500' => 'mes', 'Manes.05G164700' => 'mes', 'Manes.15G087000' => 'mes', 'Manes.15G121500' => 'mes', 'Manes.16G028300' => 'mes', 'Manes.17G046100' => 'mes', 'Manes.17G069800' => 'mes', 'Manes.18G100500' => 'mes', 'Mapoly0002s0109' => 'mpo', 'Mapoly0024s0007' => 'mpo', 'Mapoly0089s0032' => 'mpo', 'MBI04_g42241_MAGBIO' => 'mbi', 'MBI05_g11988_MAGBIO' => 'mbi', 'MBI05_g35452_MAGBIO' => 'mbi', 'MBI07_g30179_MAGBIO' => 'mbi', 'MBI07_g35859_MAGBIO' => 'mbi', 'MBI07_g35860_MAGBIO' => 'mbi', 'MBI07_g37166_MAGBIO' => 'mbi', 'MBI08_g18172_MAGBIO' => 'mbi', 'MBI09_g08441_MAGBIO' => 'mbi', 'MBI13_g01676_MAGBIO' => 'mbi', 'MBI14_g42955_MAGBIO' => 'mbi', 'MBI16_g13161_MAGBIO' => 'mbi', 'MBI17_g27204_MAGBIO' => 'mbi', 'MBI19_g21595_MAGBIO' => 'mbi', 'MD00G1148400' => 'mdo', 'MD02G1301200' => 'mdo', 'MD03G1227800' => 'mdo', 'MD05G1041100' => 'mdo', 'MD05G1124800' => 'mdo', 'MD05G1284000' => 'mdo', 'MD05G1338800' => 'mdo', 'MD05G1338900' => 'mdo', 'MD07G1022800' => 'mdo', 'MD10G1047500' => 'mdo', 'MD10G1127500' => 'mdo', 'MD10G1262300' => 'mdo', 'MD10G1293800' => 'mdo', 'MD16G1074300' => 'mdo', 'Medtr1g021670' => 'mtr', 'Medtr1g096320' => 'mtr', 'Medtr2g013690' => 'mtr', 'Medtr2g019450' => 'mtr', 'Medtr2g085170' => 'mtr', 'Medtr4g088785' => 'mtr', 'Medtr8g055930' => 'mtr', 'Medtr8g085850' => 'mtr', 'MELO3C002605.2' => 'cme', 'MELO3C003891.2' => 'cme', 'MELO3C004012.2' => 'cme', 'MELO3C007134.2' => 'cme', 'MELO3C008118.2' => 'cme', 'MELO3C016700.2' => 'cme', 'MELO3C024127.2' => 'cme', 'MELO3C033361.2' => 'cme', 'MELO3C033362.2' => 'cme', 'Migut.C00430' => 'egut', 'Migut.C01246' => 'egut', 'Migut.E00101' => 'egut', 'Migut.H01486' => 'egut', 'Migut.H01939' => 'egut', 'Migut.K00360' => 'egut', 'Migut.M00910' => 'egut', 'Migut.M01139' => 'egut', 'Migut.N02677' => 'egut', 'MSTRG.13252' => 'ama', 'MSTRG.14701' => 'ama', 'MSTRG.1521' => 'ama', 'MSTRG.15884' => 'ama', 'MSTRG.16242' => 'ama', 'MSTRG.22285' => 'ama', 'MSTRG.22444' => 'ama', 'MSTRG.2349' => 'ama', 'MSTRG.26308' => 'ama', 'MSTRG.28296' => 'ama', 'MSTRG.9895' => 'ama', 'Nitab4.5_0000110g0060' => 'nta', 'Nitab4.5_0000420g0130' => 'nta', 'Nitab4.5_0000422g0030' => 'nta', 'Nitab4.5_0000560g0180' => 'nta', 'Nitab4.5_0000703g0100' => 'nta', 'Nitab4.5_0000786g0200' => 'nta', 'Nitab4.5_0001336g0020' => 'nta', 'Nitab4.5_0001796g0030' => 'nta', 'Nitab4.5_0003348g0060' => 'nta', 'Nitab4.5_0003698g0040' => 'nta', 'Nitab4.5_0003942g0090' => 'nta', 'Nitab4.5_0004775g0070' => 'nta', 'Nitab4.5_0004864g0030' => 'nta', 'Nitab4.5_0005615g0020' => 'nta', 'Nitab4.5_0009288g0030' => 'nta', 'Nitab4.5_0009341g0010' => 'nta', 'Nitab4.5_0009535g0010' => 'nta', 'Nn1g03995' => 'nnu', 'Nn1g04100' => 'nnu', 'Nn1g06530' => 'nnu', 'Nn3g16404' => 'nnu', 'Nn3g17212' => 'nnu', 'Nn3g20776' => 'nnu', 'Nn3g21923' => 'nnu', 'Nn5g27737' => 'nnu', 'Nn5g29461' => 'nnu', 'Nn7g38355' => 'nnu', 'Nn8g39873' => 'nnu', 'Oeu000548.2' => 'oeu', 'Oeu004672.1' => 'oeu', 'Oeu015605.2' => 'oeu', 'Oeu016092.1' => 'oeu', 'Oeu017879.3' => 'oeu', 'Oeu024910.1' => 'oeu', 'Oeu028965.1' => 'oeu', 'Oeu031269.1' => 'oeu', 'Oeu031270.1' => 'oeu', 'Oeu032535.1' => 'oeu', 'Oeu034151.1' => 'oeu', 'Oeu034152.1' => 'oeu', 'Oeu034588.2' => 'oeu', 'Oeu050846.1' => 'oeu', 'Oeu050849.2' => 'oeu', 'Oeu051063.2' => 'oeu', 'Oeu052368.1' => 'oeu', 'Oeu052370.1' => 'oeu', 'Os01g0210400' => 'osa', 'Os01g0304300' => 'osa', 'Os01g0749100' => 'osa', 'Os02g0745800' => 'osa', 'Os03g0769050' => 'osa', 'Os05g0531500' => 'osa', 'Os06g0724300' => 'osa', 'Os11g0198100' => 'osa', 'Peaxi162Scf00069g01425' => 'pax', 'Peaxi162Scf00280g00811' => 'pax', 'Peaxi162Scf00310g00615' => 'pax', 'Peaxi162Scf00362g00542' => 'pax', 'Peaxi162Scf00461g00310' => 'pax', 'Peaxi162Scf00530g00118' => 'pax', 'Peaxi162Scf00541g00057' => 'pax', 'Peaxi162Scf00661g00017' => 'pax', 'Peaxi162Scf00926g00027' => 'pax', 'Peaxi162Scf01064g00263' => 'pax', 'Peaxi162Scf01211g00135' => 'pax', 'PGR004G2336' => 'pgr', 'PGR042G0327' => 'pgr', 'PGR042G1957' => 'pgr', 'PGR042G2003' => 'pgr', 'PGR042G3929' => 'pgr', 'PGR083G1137' => 'pgr', 'PGR083G1364' => 'pgr', 'PGSC0003DMG400003381' => 'stu', 'PGSC0003DMG400003417' => 'stu', 'PGSC0003DMG400008981' => 'stu', 'PGSC0003DMG400012417' => 'stu', 'PGSC0003DMG400012823' => 'stu', 'PGSC0003DMG400016885' => 'stu', 'PGSC0003DMG400022812' => 'stu', 'PGSC0003DMG400029726' => 'stu', 'PGSC0003DMG401009243' => 'stu', 'PGSC0003DMG401031505' => 'stu', 'PGSC0003DMG402031505' => 'stu', 'Phvul.001G017600' => 'pvu', 'Phvul.002G193500' => 'pvu', 'Phvul.002G228900' => 'pvu', 'Phvul.002G236800' => 'pvu', 'Phvul.003G049500' => 'pvu', 'Phvul.005G072000' => 'pvu', 'Phvul.006G164800' => 'pvu', 'Phvul.006G185100' => 'pvu', 'Phvul.007G090000' => 'pvu', 'Potri.001G399800' => 'ptr', 'Potri.002G149900' => 'ptr', 'Potri.004G044100' => 'ptr', 'Potri.004G177600' => 'ptr', 'Potri.009G138000' => 'ptr', 'Potri.010G094000' => 'ptr', 'Potri.011G053000' => 'ptr', 'Potri.011G119300' => 'ptr', 'Potri.013G113700' => 'ptr', 'Potri.018G107800' => 'ptr', 'Potri.019G084100' => 'ptr', 'Pp3c14_23720' => 'ppa', 'Pp3c16_6340' => 'ppa', 'Pp3c23_13420' => 'ppa', 'Pp3c24_2740' => 'ppa', 'Pp3c25_860' => 'ppa', 'Pp3c8_21750' => 'ppa', 'Prupe.1G273000' => 'ppe', 'Prupe.1G273700' => 'ppe', 'Prupe.1G274100' => 'ppe', 'Prupe.2G023300' => 'ppe', 'Prupe.4G048000' => 'ppe', 'Prupe.4G080400' => 'ppe', 'Prupe.4G181200' => 'ppe', 'Prupe.8G056900' => 'ppe', 'Prupe.8G168700' => 'ppe', 'Psat1g189080' => 'psa', 'Psat1g204760' => 'psa', 'Psat4g175560' => 'psa', 'Psat4g177720' => 'psa', 'Psat5g244240' => 'psa', 'Psat6g010720' => 'psa', 'Psat6g187200' => 'psa', 'Psat7g072040' => 'psa', 'PSO017G3501' => 'pso', 'PSO063G2148' => 'pso', 'PSO063G5608' => 'pso', 'PSO210G6392' => 'pso', 'PSO541G2319' => 'pso', 'PSO541G2836' => 'pso', 'PSO541G4012' => 'pso', 'PSO541G6253' => 'pso', 'PSO675G0580' => 'pso', 'PSO675G0856' => 'pso', 'PSO675G5635' => 'pso', 'PSO675G9157' => 'pso', 'PSO832G1660' => 'pso', 'PSO832G1969' => 'pso', 'QL02p007186' => 'qlo', 'QL02p033904' => 'qlo', 'QL03p064391' => 'qlo', 'QL05p040593' => 'qlo', 'QL05p058242' => 'qlo', 'QL08p021825' => 'qlo', 'QL11p004981' => 'qlo', 'RcHm_v2.0_Chr1g0318301' => 'rch', 'RcHm_v2.0_Chr4g0418501' => 'rch', 'RcHm_v2.0_Chr4g0439971' => 'rch', 'RcHm_v2.0_Chr5g0008541' => 'rch', 'RcHm_v2.0_Chr5g0014101' => 'rch', 'RcHm_v2.0_Chr5g0014131' => 'rch', 'RcHm_v2.0_Chr5g0033621' => 'rch', 'RcHm_v2.0_Chr6g0272041' => 'rch', 'RcHm_v2.0_Chr6g0278831' => 'rch', 'Rhsim02G0130400' => 'rsi', 'Rhsim02G0171100' => 'rsi', 'Rhsim05G0053000' => 'rsi', 'Rhsim05G0053100' => 'rsi', 'Rhsim06G0096500' => 'rsi', 'Rhsim06G0096600' => 'rsi', 'Rhsim06G0199100' => 'rsi', 'Rhsim12G0062300' => 'rsi', 'Rhsim12G0062800' => 'rsi', 'Sabra02G0118600' => 'sbr', 'Sabra04G0027300' => 'sbr', 'Sabra04G0119500' => 'sbr', 'Sabra08G0112500' => 'sbr', 'Sabra11G0036800' => 'sbr', 'Sabra11G0103800' => 'sbr', 'Sabra13G0096300' => 'sbr', 'Sabra16G0262300' => 'sbr', 'Sabra18G0091700' => 'sbr', 'Sabra19G0095400' => 'sbr', 'SalBow6G3080' => 'sbo', 'SalBow7G1157' => 'sbo', 'SalBow7G2123' => 'sbo', 'SalBow7G2285' => 'sbo', 'SalBow7G3537' => 'sbo', 'SalBow8G2947' => 'sbo', 'SalBow8G4463' => 'sbo', 'SalBow8G5466' => 'sbo', 'Sc01g0001750' => 'sci', 'Sc02g0006640' => 'sci', 'Sc02g0006670' => 'sci', 'Sc04g0008220' => 'sci', 'Sc05g0006190' => 'sci', 'Sc08g0002760' => 'sci', 'Sc17g0006170' => 'sci', 'Sc22g0002050' => 'sci', 'Sc23g0001190' => 'sci', 'Sc24g0000980' => 'sci', 'Sed0006245' => 'sed', 'Sed0007543' => 'sed', 'Sed0009411' => 'sed', 'Sed0010765' => 'sed', 'Sed0012944' => 'sed', 'Sed0014682' => 'sed', 'Sed0016174' => 'sed', 'Sed0016796' => 'sed', 'Sed0020317' => 'sed', 'Sed0021467' => 'sed', 'SEGI_01316' => 'sgi', 'SEGI_03374' => 'sgi', 'SEGI_16265' => 'sgi', 'SEGI_18569' => 'sgi', 'SEGI_20351' => 'sgi', 'SEGI_26395' => 'sgi', 'SEGI_29469' => 'sgi', 'SEGI_34771' => 'sgi', 'SEGI_36769' => 'sgi', 'SEGI_37139' => 'sgi', 'SGA_v2.0_scaffold100G29687' => 'sas', 'SGA_v2.0_scaffold118G32472' => 'sas', 'SGA_v2.0_scaffold14G07051' => 'sas', 'SGA_v2.0_scaffold183G39845' => 'sas', 'SGA_v2.0_scaffold1G00174' => 'sas', 'SGA_v2.0_scaffold22G09714' => 'sas', 'SGA_v2.0_scaffold333G48992' => 'sas', 'SGA_v2.0_scaffold46G17491' => 'sas', 'SGA_v2.0_scaffold49G18294' => 'sas', 'SGA_v2.0_scaffold63G21658' => 'sas', 'SHI01741' => 'shi', 'SHI05771' => 'shi', 'SHI18077' => 'shi', 'SHI20525' => 'shi', 'SHI20527' => 'shi', 'SHI20528' => 'shi', 'SMO172G0185' => 'smo', 'SMO198G0020' => 'smo', 'SMO351G0006' => 'smo', 'SMO356G0118' => 'smo', 'SMO358G0296' => 'smo', 'SMO367G0079' => 'smo', 'SMO367G1277' => 'smo', 'Solyc01g014220.3' => 'sly', 'Solyc01g111770.2' => 'sly', 'Solyc02g078180.3' => 'sly', 'Solyc03g006430.3' => 'sly', 'Solyc03g006456.1' => 'sly', 'Solyc03g079860.2' => 'sly', 'Solyc04g079770.3' => 'sly', 'Solyc05g007430.4' => 'sly', 'Solyc07g063150.3' => 'sly', 'Solyc08g016620.3' => 'sly', 'Solyc09g057590.3' => 'sly', 'Solyc09g057600.1' => 'sly', 'Solyc10g009050.3' => 'sly', 'Solyc11g017420.2' => 'sly', 'Sopen01g053810' => 'spe', 'Sopen02g023040' => 'spe', 'Sopen03g002440' => 'spe', 'Sopen04g033350' => 'spe', 'Sopen05g003310' => 'spe', 'Sopen07g004050' => 'spe', 'Sopen07g031340' => 'spe', 'Sopen08g006990' => 'spe', 'Sopen10g004830' => 'spe', 'Sopen11g009370' => 'spe', 'Sp1g24450' => 'spa', 'Sp1g29670' => 'spa', 'Sp1g39600' => 'spa', 'Sp2g11080' => 'spa', 'Sp2g13970' => 'spa', 'Sp4g16130' => 'spa', 'Sp6g13080' => 'spa', 'Sp7g37270' => 'spa', 'TAR371G0065' => 'tar', 'TAR376G0340' => 'tar', 'TAR376G0435' => 'tar', 'TAR381G0002' => 'tar', 'TAR381G1236' => 'tar', 'TAR624G0055' => 'tar', 'TAR624G0324' => 'tar', 'TAR624G0696' => 'tar', 'TAR624G0906' => 'tar', 'TAR625G0107' => 'tar', 'TAR626G0015' => 'tar', 'TAR626G1356' => 'tar', 'TAR627G0888' => 'tar', 'TAR628G0399' => 'tar', 'TAR628G1327' => 'tar', 'TAR629G2831' => 'tar', 'TAR629G2874' => 'tar', 'TAR633G1432' => 'tar', 'TAR633G2771' => 'tar', 'THA.LOC104803394' => 'tha', 'THA.LOC104805153' => 'tha', 'THA.LOC104806784' => 'tha', 'THA.LOC104810473' => 'tha', 'THA.LOC104813100' => 'tha', 'THA.LOC104814215' => 'tha', 'THA.LOC104815554' => 'tha', 'THA.LOC104820544' => 'tha', 'THA.LOC104824754' => 'tha', 'THA.LOC104827717' => 'tha', 'Thecc.02G031400' => 'tca', 'Thecc.02G055900' => 'tca', 'Thecc.02G350800' => 'tca', 'Thecc.06G150900' => 'tca', 'Thecc.06G186600' => 'tca', 'Thecc.07G089600' => 'tca', 'Thecc.08G020400' => 'tca', 'Thecc.08G182100' => 'tca', 'Thhalv10000873m.g' => 'esa', 'Thhalv10004185m.g' => 'esa', 'Thhalv10006981m.g' => 'esa', 'Thhalv10007204m.g' => 'esa', 'Thhalv10011374m.g' => 'esa', 'Thhalv10013482m.g' => 'esa', 'Thhalv10017801m.g' => 'esa', 'Thhalv10024983m.g' => 'esa', 'TPR.G12072' => 'tpr', 'TPR.G15769' => 'tpr', 'TPR.G16504' => 'tpr', 'TPR.G16506' => 'tpr', 'TPR.G24345' => 'tpr', 'TPR.G26666' => 'tpr', 'TPR.G27320' => 'tpr', 'TPR.G31819' => 'tpr', 'TPR.G38879' => 'tpr', 'TPR.G39015' => 'tpr', 'TPR.G8819' => 'tpr', 'TWI09G0924' => 'twi', 'TWI12G0811' => 'twi', 'TWI12G1294' => 'twi', 'TWI31G0150' => 'twi', 'TWI36G1262' => 'twi', 'TWI38G1287' => 'twi', 'TWI38G1633' => 'twi', 'TWI38G1982' => 'twi', 'TWI39G0116' => 'twi', 'TWI60G1011' => 'twi', 'TWI63G0171' => 'twi', 'TWI73G0839' => 'twi', 'TWI79G1511' => 'twi', 'unitig_0.g915' => 'ugi', 'unitig_0.g916' => 'ugi', 'unitig_21.g20219' => 'ugi', 'unitig_21.g20416' => 'ugi', 'unitig_578.g16132' => 'ugi', 'unitig_578.g16718' => 'ugi', 'unitig_62.g23481' => 'ugi', 'unitig_744.g24535' => 'ugi', 'unitig_749.g13525' => 'ugi', 'vmacro01248' => 'vma', 'vmacro02290' => 'vma', 'vmacro10946' => 'vma', 'vmacro11865' => 'vma', 'vmacro12493' => 'vma', 'vmacro17322' => 'vma', 'vmacro21599' => 'vma', 'vmacro23041' => 'vma', 'VMungo0251G0004' => 'vmu', 'VMungo0251G2639' => 'vmu', 'VMungo0251G2967' => 'vmu', 'VMungo0540G0864' => 'vmu', 'VMungo0540G1569' => 'vmu', 'VMungo0647G0317' => 'vmu', 'VMungo0720G1373' => 'vmu', 'VMungo0720G1508' => 'vmu', 'VMungo1080G0485' => 'vmu', 'VMungo1215G3177' => 'vmu', 'Zm00001eb112600' => 'zma', 'Zm00001eb120220' => 'zma', 'Zm00001eb153240' => 'zma', 'Zm00001eb168880' => 'zma', 'Zm00001eb213920' => 'zma', 'Zm00001eb228280' => 'zma', 'Zm00001eb254580' => 'zma', 'Zm00001eb272180' => 'zma', 'Zm00001eb293190' => 'zma', 'Zm00001eb322930' => 'zma', 'Zm00001eb353360' => 'zma', 'Zm00001eb353390' => 'zma', 'Zm00001eb353430' => 'zma', 'Zm00001eb353440' => 'zma', 'Zm00001eb353780' => 'zma' ) $gf_id = 'HOM05D000499' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000499' ) $data_identifier = 'HOM05D000499' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 29, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 12, 'amhyb' => (int) 8, 'aly' => (int) 12, 'aox' => (int) 9, 'arhy' => (int) 26, 'ath' => (int) 8, 'atr' => (int) 7, 'acertr' => (int) 10, 'cqu' => (int) 15, 'bca' => (int) 29, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 11, 'cansat' => (int) 8, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 9, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 8, 'cpa' => (int) 10, 'csa' => (int) 7, 'camsi' => (int) 20, 'dca' => (int) 8, 'din' => (int) 12, 'dzi' => (int) 14, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 6, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 38, 'gra' => (int) 16, 'vvi' => (int) 8, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 5, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 11, 'lja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 11, 'mpo' => (int) 3, 'mbi' => (int) 14, 'mdo' => (int) 14, 'mtr' => (int) 8, 'cme' => (int) 9, 'egut' => (int) 9, 'ama' => (int) 11, 'nta' => (int) 17, 'nnu' => (int) 11, 'oeu' => (int) 18, 'osa' => (int) 8, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 6, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 9, 'rsi' => (int) 9, 'sbr' => (int) 10, 'sbo' => (int) 8, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 10, 'sas' => (int) 10, 'shi' => (int) 6, 'smo' => (int) 7, 'sly' => (int) 14, 'spe' => (int) 10, 'spa' => (int) 8, 'tar' => (int) 19, 'tha' => (int) 10, 'tca' => (int) 8, 'esa' => (int) 8, 'tpr' => (int) 11, 'twi' => (int) 13, 'ugi' => (int) 9, 'vma' => (int) 8, 'vmu' => (int) 10, 'zma' => (int) 15 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb353780' $species_info = array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ) $local_species = 'sbr' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000499', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1066', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p29780' => 'bna', 'A02p33180' => 'bna', 'A03p16470' => 'bna', 'A03p66010' => 'bna', 'A04p25970' => 'bna', 'A06p01270' => 'bna', 'A06p46080' => 'bna', 'A07p11400' => 'bna', 'A08p01840' => 'bna', 'A08p08230' => 'bna', 'A08p25740' => 'bna', 'A09p32070' => 'bna', 'A09p37830' => 'bna', 'A09p42840' => 'bna', 'A09p42850' => 'bna', 'Aa31LG10G2060' => 'aar', 'Aa31LG2G7410' => 'aar', 'Aa31LG6G10200' => 'aar', 'Aa31LG6G16680' => 'aar', 'Aa31LG6G8470' => 'aar', 'Aa31LG9G12730' => 'aar', 'Aa31LG9G13680' => 'aar', 'Aa31LG9G14920' => 'aar', 'Aa31LG9G6650' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4977' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5467' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3254' => 'aag', 'Actinidia02578' => 'ach', 'Actinidia07693' => 'ach', 'Actinidia08413' => 'ach', 'Actinidia08414' => 'ach', 'Actinidia15289' => 'ach', 'Actinidia19871' => 'ach', 'Actinidia21475' => 'ach', 'Actinidia22576' => 'ach', 'Actinidia28327' => 'ach', 'Actinidia32491' => 'ach', 'Actinidia39463' => 'ach', 'Actinidia39571' => 'ach', 'Ah.01g013750' => 'amhyb', 'Ah.01g023210' => 'amhyb', 'Ah.04g164850' => 'amhyb', 'Ah.05g178060' => 'amhyb', 'Ah.07g204270' => 'amhyb', 'Ah.07g208480' => 'amhyb', 'Ah.09g237410' => 'amhyb', 'Ah.14g089460' => 'amhyb', 'AL1G41790' => 'aly', 'AL1G49050' => 'aly', 'AL1G53810' => 'aly', 'AL1G61400' => 'aly', 'AL4G18580' => 'aly', 'AL5G12510' => 'aly', 'AL5G12540' => 'aly', 'AL6G43230' => 'aly', 'AL7G10370' => 'aly', 'AL7G19250' => 'aly', 'AL8G12240' => 'aly', 'AL8G18540' => 'aly', 'Aqoxy1G02409' => 'aox', 'Aqoxy2G03993' => 'aox', 'Aqoxy3G03357' => 'aox', 'Aqoxy4G00785' => 'aox', 'Aqoxy5G02598' => 'aox', 'Aqoxy6G00132' => 'aox', 'Aqoxy7G01776' => 'aox', 'Aqoxy7G02316' => 'aox', 'Aqoxy7G03973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.12AFKW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B8730' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27IQR1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3F75VG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3RE0GA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41TCQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.527VTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FIR39' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5W8UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DA38EV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ63HS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H1I32C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HC27T5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4M8AP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7N3CZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9UVDZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LS1NQA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT1D4B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SKC4TM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCFV76' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF9Q1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQWD9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1ZM88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WE07RT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YCK7VH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJE6Q6' => 'arhy', 'AT1G28240' => 'ath', 'AT1G34550' => 'ath', 'AT1G53040' => 'ath', 'AT2G02910' => 'ath', 'AT4G09630' => 'ath', 'AT4G38500' => 'ath', 'AT5G42660' => 'ath', 'AT5G46220' => 'ath', 'ATR0152G026' => 'atr', 'ATR0564G343' => 'atr', 'ATR0706G151' => 'atr', 'ATR0733G207' => 'atr', 'ATR0751G234' => 'atr', 'ATR0807G048' => 'atr', 'ATR1091G084' => 'atr', 'Atru.chr10.1229' => 'acertr', 'Atru.chr10.1230' => 'acertr', 'Atru.chr10.1874' => 'acertr', 'Atru.chr11.1808' => 'acertr', 'Atru.chr13.1795' => 'acertr', 'Atru.chr13.570' => 'acertr', 'Atru.chr2.2608' => 'acertr', 'Atru.chr2.2609' => 'acertr', 'Atru.chr5.3428' => 'acertr', 'Atru.chr8.1171' => 'acertr', 'AUR62004651' => 'cqu', 'AUR62008675' => 'cqu', 'AUR62010014' => 'cqu', 'AUR62013004' => 'cqu', 'AUR62014825' => 'cqu', 'AUR62015015' => 'cqu', 'AUR62015151' => 'cqu', 'AUR62017020' => 'cqu', 'AUR62019422' => 'cqu', 'AUR62023570' => 'cqu', 'AUR62025571' => 'cqu', 'AUR62029098' => 'cqu', 'AUR62033863' => 'cqu', 'AUR62034296' => 'cqu', 'AUR62040075' => 'cqu', 'BcaB02g07334' => 'bca', 'BcaB02g10575' => 'bca', 'BcaB03g12119' => 'bca', 'BcaB03g12120' => 'bca', 'BcaB03g13945' => 'bca', 'BcaB04g17123' => 'bca', 'BcaB04g17867' => 'bca', 'BcaB04g19839' => 'bca', 'BcaB07g30317' => 'bca', 'BcaB07g32432' => 'bca', 'BcaB07g33362' => 'bca', 'BcaB08g36611' => 'bca', 'BcaC01g00028' => 'bca', 'BcaC01g01356' => 'bca', 'BcaC01g02034' => 'bca', 'BcaC01g06051' => 'bca', 'BcaC03g16839' => 'bca', 'BcaC03g17176' => 'bca', 'BcaC05g26829' => 'bca', 'BcaC06g31490' => 'bca', 'BcaC06g35344' => 'bca', 'BcaC06g36570' => 'bca', 'BcaC07g37537' => 'bca', 'BcaC08g43491' => 'bca', 'BcaC08g43773' => 'bca', 'BcaNung00234' => 'bca', 'BcaNung01982' => 'bca', 'BcaNung03707' => 'bca', 'BcaNung06454' => 'bca', 'BolC2t10762H' => 'bol', 'BolC2t11191H' => 'bol', 'BolC3t14322H' => 'bol', 'BolC3t19747H' => 'bol', 'BolC3t21425H' => 'bol', 'BolC4t27800H' => 'bol', 'BolC5t31423H' => 'bol', 'BolC6t35951H' => 'bol', 'BolC6t36282H' => 'bol', 'BolC7t40678H' => 'bol', 'BolC7t40679H' => 'bol', 'BolC7t42222H' => 'bol', 'BolC7t43492H' => 'bol', 'BolC7t46785H' => 'bol', 'BolC8t47853H' => 'bol', 'BolC9t56805H' => 'bol', 'BraA02t08000Z' => 'bra', 'BraA02t08341Z' => 'bra', 'BraA03t10936Z' => 'bra', 'BraA03t15657Z' => 'bra', 'BraA04t18100Z' => 'bra', 'BraA05t20523Z' => 'bra', 'BraA06t23353Z' => 'bra', 'BraA06t27473Z' => 'bra', 'BraA06t27769Z' => 'bra', 'BraA07t28928Z' => 'bra', 'BraA08t32236Z' => 'bra', 'BraA08t32841Z' => 'bra', 'BraA08t34524Z' => 'bra', 'BraA09t38742Z' => 'bra', 'BraA09t39295Z' => 'bra', 'C02p47180' => 'bna', 'C02p50990' => 'bna', 'C03p19360' => 'bna', 'C03p74950' => 'bna', 'C03p91000' => 'bna', 'C04p63260' => 'bna', 'C05p27050' => 'bna', 'C06p08750' => 'bna', 'C06p11490' => 'bna', 'C07p02820' => 'bna', 'C07p17180' => 'bna', 'C07p29440' => 'bna', 'C07p63730' => 'bna', 'C09p39260' => 'bna', 'CAN.G1164.34' => 'can', 'CAN.G1164.39' => 'can', 'CAN.G1530.3' => 'can', 'CAN.G162.61' => 'can', 'CAN.G176.6' => 'can', 'CAN.G289.49' => 'can', 'CAN.G370.21' => 'can', 'CAN.G370.22' => 'can', 'CAN.G371.117' => 'can', 'CAN.G58.37' => 'can', 'CAN.G588.98' => 'can', 'CANSAT21G2266' => 'cansat', 'CANSAT25G2799' => 'cansat', 'CANSAT35G0862' => 'cansat', 'CANSAT35G1704' => 'cansat', 'CANSAT35G1760' => 'cansat', 'CANSAT56G3971' => 'cansat', 'CANSAT56G4116' => 'cansat', 'CANSAT80G1259' => 'cansat', 'CARHR027730' => 'chi', 'CARHR033880' => 'chi', 'CARHR043270' => 'chi', 'CARHR145330' => 'chi', 'CARHR145340' => 'chi', 'CARHR175570' => 'chi', 'CARHR181570' => 'chi', 'CARHR258470' => 'chi', 'CARHR260490' => 'chi', 'CARHR294220' => 'chi', 'Carub.0001s2668' => 'cru', 'Carub.0001s3257' => 'cru', 'Carub.0001s4220' => 'cru', 'Carub.0005s0179' => 'cru', 'Carub.0006s2807' => 'cru', 'Carub.0007s0039' => 'cru', 'Carub.0008s0169' => 'cru', 'Carub.0008s0636' => 'cru', 'Ca_00338_v3' => 'car', 'Ca_00542_v3' => 'car', 'Ca_01844_v3' => 'car', 'Ca_10611_v3' => 'car', 'Ca_13326_v3' => 'car', 'Ca_17944_v3' => 'car', 'Ca_18546_v3' => 'car', 'Ca_24219_v3' => 'car', 'Ca_29972_v3' => 'car', 'CBR_g3681' => 'cbr', 'CBR_g40021' => 'cbr', 'Cc01_g08140' => 'ccan', 'Cc02_g13410' => 'ccan', 'Cc02_g37480' => 'ccan', 'Cc05_g12030' => 'ccan', 'Cc09_g03370' => 'ccan', 'Cc09_g10300' => 'ccan', 'Cc10_g03530' => 'ccan', 'Cc10_g11380' => 'ccan', 'CDE01G0176' => 'cde', 'CDE02G0675' => 'cde', 'CDE02G0942' => 'cde', 'CDE02G1153' => 'cde', 'CDE02G4177' => 'cde', 'CDE04G2117' => 'cde', 'CDE04G2736' => 'cde', 'CDE08G1161' => 'cde', 'CDE09G1238' => 'cde', 'Cfa000467' => 'cfa', 'Cfa000947' => 'cfa', 'Cfa004969' => 'cfa', 'Cfa005284' => 'cfa', 'Cfa008993' => 'cfa', 'Cfa018187' => 'cfa', 'Cfa018454' => 'cfa', 'Cfa020585' => 'cfa', 'Ciclev10000424m.g' => 'ccl', 'Ciclev10003605m.g' => 'ccl', 'Ciclev10007828m.g' => 'ccl', 'Ciclev10014620m.g' => 'ccl', 'Ciclev10015169m.g' => 'ccl', 'Ciclev10018291m.g' => 'ccl', 'Ciclev10028256m.g' => 'ccl', 'Ciclev10033822m.g' => 'ccl', 'CiPaw.05G060300' => 'cil', 'CiPaw.05G085000' => 'cil', 'CiPaw.06G083700' => 'cil', 'CiPaw.06G120300' => 'cil', 'CiPaw.09G060500' => 'cil', 'CiPaw.09G123800' => 'cil', 'CiPaw.11G169700' => 'cil', 'CiPaw.12G118300' => 'cil', 'CiPaw.15G071000' => 'cil', 'CiPaw.15G081900' => 'cil', 'ClCG01G024610' => 'cla', 'ClCG03G006070' => 'cla', 'ClCG05G019250' => 'cla', 'ClCG09G009500' => 'cla', 'ClCG11G008200' => 'cla', 'ClCG11G018080' => 'cla', 'COL.COLO4_17373' => 'col', 'COL.COLO4_22994' => 'col', 'COL.COLO4_26389' => 'col', 'COL.COLO4_27170' => 'col', 'COL.COLO4_31074' => 'col', 'COL.COLO4_31465' => 'col', 'COL.COLO4_36438' => 'col', 'COL.COLO4_36439' => 'col', 'Cpa.g.c38781' => 'cpa', 'Cpa.g.sc128.12' => 'cpa', 'Cpa.g.sc166.7' => 'cpa', 'Cpa.g.sc166.8' => 'cpa', 'Cpa.g.sc20.111' => 'cpa', 'Cpa.g.sc27.31' => 'cpa', 'Cpa.g.sc64.36' => 'cpa', 'Cpa.g.sc64.37' => 'cpa', 'Cpa.g.sc66.49' => 'cpa', 'Cpa.g.sc80.64' => 'cpa', 'CsaV3_1G012320' => 'csa', 'CsaV3_2G008480' => 'csa', 'CsaV3_2G033450' => 'csa', 'CsaV3_3G044830' => 'csa', 'CsaV3_4G033710' => 'csa', 'CsaV3_6G051730' => 'csa', 'CsaV3_7G025350' => 'csa', 'CSS0001067' => 'camsi', 'CSS0005996' => 'camsi', 'CSS0006590' => 'camsi', 'CSS0009673' => 'camsi', 'CSS0010201' => 'camsi', 'CSS0010549' => 'camsi', 'CSS0011364' => 'camsi', 'CSS0014473' => 'camsi', 'CSS0014961' => 'camsi', 'CSS0020191' => 'camsi', 'CSS0021165' => 'camsi', 'CSS0022306' => 'camsi', 'CSS0030591' => 'camsi', 'CSS0030696' => 'camsi', 'CSS0032653' => 'camsi', 'CSS0037487' => 'camsi', 'CSS0041102' => 'camsi', 'CSS0041261' => 'camsi', 'CSS0046246' => 'camsi', 'CSS0049256' => 'camsi', 'DCAR_004075' => 'dca', 'DCAR_011538' => 'dca', 'DCAR_019553' => 'dca', 'DCAR_020952' => 'dca', 'DCAR_021739' => 'dca', 'DCAR_027407' => 'dca', 'DCAR_027913' => 'dca', 'DCAR_028066' => 'dca', 'Dinv05899' => 'din', 'Dinv07563' => 'din', 'Dinv08010' => 'din', 'Dinv14125' => 'din', 'Dinv20172' => 'din', 'Dinv30743' => 'din', 'Dinv31229' => 'din', 'Dinv34162' => 'din', 'Dinv36028' => 'din', 'Dinv39368' => 'din', 'Dinv40565' => 'din', 'Dinv41706' => 'din', 'Duzib052G0089' => 'dzi', 'Duzib116G0641' => 'dzi', 'Duzib132G0069' => 'dzi', 'Duzib132G1219' => 'dzi', 'Duzib147G0278' => 'dzi', 'Duzib160G0480' => 'dzi', 'Duzib170G0661' => 'dzi', 'Duzib177G0591' => 'dzi', 'Duzib187G1353' => 'dzi', 'Duzib192G0858' => 'dzi', 'Duzib192G0883' => 'dzi', 'Duzib213G0506' => 'dzi', 'Duzib235G0289' => 'dzi', 'Duzib251G0422' => 'dzi', 'ECA232G3898' => 'eca', 'ECA233G5950' => 'eca', 'ECA234G1699' => 'eca', 'ECA234G2421' => 'eca', 'ECA236G0426' => 'eca', 'ECA236G4331' => 'eca', 'ECA248G2573' => 'eca', 'EL10Ac1g00077' => 'bvu', 'EL10Ac1g01746' => 'bvu', 'EL10Ac2g03464' => 'bvu', 'EL10Ac4g08176' => 'bvu', 'EL10Ac7g17521' => 'bvu', 'EL10Ac8g20386' => 'bvu', 'EL10Ac9g21343' => 'bvu', 'EL10Ac9g22688' => 'bvu', 'Eucgr.B03434' => 'egr', 'Eucgr.D00618' => 'egr', 'Eucgr.E02395' => 'egr', 'Eucgr.F01129' => 'egr', 'Eucgr.F02622' => 'egr', 'Eucgr.F04207' => 'egr', 'FAN01G0570' => 'fan', 'FAN03G3351' => 'fan', 'FAN06G3702' => 'fan', 'FAN07G2149' => 'fan', 'FAN10G3758' => 'fan', 'FAN11G1170' => 'fan', 'FAN11G2050' => 'fan', 'FAN11G2724' => 'fan', 'FAN12G1700' => 'fan', 'FAN12G2028' => 'fan', 'FAN15G1160' => 'fan', 'FAN15G3063' => 'fan', 'FAN16G2540' => 'fan', 'FAN16G3077' => 'fan', 'FAN16G3624' => 'fan', 'FAN17G0221' => 'fan', 'FAN20G2492' => 'fan', 'FAN20G2905' => 'fan', 'FAN21G0548' => 'fan', 'FAN21G1300' => 'fan', 'FAN22G0077' => 'fan', 'FAN22G1315' => 'fan', 'FAN24G1280' => 'fan', 'FAN24G1445' => 'fan', 'FAN24G3527' => 'fan', 'FAN25G0464' => 'fan', 'FAN25G2885' => 'fan', 'FAN25G3270' => 'fan', 'FAN27G1101' => 'fan', 'FAN27G2846' => 'fan', 'FAN27G3524' => 'fan', 'FvH4_2g11770' => 'fve', 'FvH4_2g15630' => 'fve', 'FvH4_3g05570' => 'fve', 'FvH4_3g09110' => 'fve', 'FvH4_3g19940' => 'fve', 'FvH4_4g04821' => 'fve', 'FvH4_4g31480' => 'fve', 'FvH4_7g01740' => 'fve', 'Glyma.05G130400' => 'gma', 'Glyma.05G156400' => 'gma', 'Glyma.07G197000' => 'gma', 'Glyma.08G085151' => 'gma', 'Glyma.08G114500' => 'gma', 'Glyma.08G300400' => 'gma', 'Glyma.10G215800' => 'gma', 'Glyma.12G224400' => 'gma', 'Glyma.13G179300' => 'gma', 'Glyma.13G218151' => 'gma', 'Glyma.13G238800' => 'gma', 'Glyma.13G276900' => 'gma', 'Glyma.14G078200' => 'gma', 'Glyma.15G074500' => 'gma', 'Glyma.15G094100' => 'gma', 'Glyma.17G247200' => 'gma', 'Glyma.18G120100' => 'gma', 'Glyma.20G176000' => 'gma', 'Gohir.A01G063600' => 'ghi', 'Gohir.A01G170301' => 'ghi', 'Gohir.A02G060500' => 'ghi', 'Gohir.A05G133850' => 'ghi', 'Gohir.A05G161400' => 'ghi', 'Gohir.A06G012900' => 'ghi', 'Gohir.A06G035901' => 'ghi', 'Gohir.A06G127100' => 'ghi', 'Gohir.A06G210500' => 'ghi', 'Gohir.A08G008650' => 'ghi', 'Gohir.A09G072700' => 'ghi', 'Gohir.A09G088301' => 'ghi', 'Gohir.A10G040600' => 'ghi', 'Gohir.A12G036300' => 'ghi', 'Gohir.A12G143350' => 'ghi', 'Gohir.A12G165500' => 'ghi', 'Gohir.A13G145700' => 'ghi', 'Gohir.D01G050000' => 'ghi', 'Gohir.D01G051366' => 'ghi', 'Gohir.D01G161350' => 'ghi', 'Gohir.D02G065900' => 'ghi', 'Gohir.D05G164200' => 'ghi', 'Gohir.D05G355500' => 'ghi', 'Gohir.D06G010400' => 'ghi', 'Gohir.D06G111250' => 'ghi', 'Gohir.D06G132000' => 'ghi', 'Gohir.D06G210500' => 'ghi', 'Gohir.D07G165675' => 'ghi', 'Gohir.D08G062240' => 'ghi', 'Gohir.D08G086101' => 'ghi', 'Gohir.D08G138060' => 'ghi', 'Gohir.D09G072300' => 'ghi', 'Gohir.D10G041400' => 'ghi', 'Gohir.D11G191020' => 'ghi', 'Gohir.D11G212066' => 'ghi', 'Gohir.D12G036300' => 'ghi', 'Gohir.D12G168600' => 'ghi', 'Gohir.D13G150600' => 'ghi', 'Gorai.001G057300' => 'gra', 'Gorai.002G069900' => 'gra', 'Gorai.002G200000' => 'gra', 'Gorai.003G067600' => 'gra', 'Gorai.005G074800' => 'gra', 'Gorai.006G087300' => 'gra', 'Gorai.008G037500' => 'gra', 'Gorai.008G181400' => 'gra', 'Gorai.009G169400' => 'gra', 'Gorai.009G387900' => 'gra', 'Gorai.010G013300' => 'gra', 'Gorai.010G153800' => 'gra', 'Gorai.010G255800' => 'gra', 'Gorai.011G043700' => 'gra', 'Gorai.011G198900' => 'gra', 'Gorai.013G168400' => 'gra', 'GSVIVG01005212001' => 'vvi', 'GSVIVG01006163001' => 'vvi', 'GSVIVG01009625001' => 'vvi', 'GSVIVG01014338001' => 'vvi', 'GSVIVG01020005001' => 'vvi', 'GSVIVG01021450001' => 'vvi', 'GSVIVG01023975001' => 'vvi', 'GSVIVG01034490001' => 'vvi', 'HanXRQChr04g0112071' => 'han', 'HanXRQChr05g0131151' => 'han', 'HanXRQChr09g0262371' => 'han', 'HanXRQChr09g0268401' => 'han', 'HanXRQChr10g0279241' => 'han', 'HanXRQChr10g0297961' => 'han', 'HanXRQChr11g0326231' => 'han', 'HanXRQChr11g0328471' => 'han', 'HanXRQChr16g0507941' => 'han', 'HanXRQChr17g0560211' => 'han', 'Haze_02108' => 'cav', 'Haze_02428' => 'cav', 'Haze_05593' => 'cav', 'Haze_06448' => 'cav', 'Haze_09427' => 'cav', 'Haze_12022' => 'cav', 'Haze_17612' => 'cav', 'Haze_17928' => 'cav', 'Hma1.2p1_0032F.1_g019250' => 'hma', 'Hma1.2p1_0163F.1_g072690' => 'hma', 'Hma1.2p1_0265F.1_g106710' => 'hma', 'Hma1.2p1_0286F.1_g113970' => 'hma', 'Hma1.2p1_0363F.1_g136640' => 'hma', 'Hma1.2p1_0584F.1_g183470' => 'hma', 'Hma1.2p1_0885F.1_g232570' => 'hma', 'HPP92_006022' => 'vpl', 'HPP92_007320' => 'vpl', 'HPP92_011521' => 'vpl', 'HPP92_019387' => 'vpl', 'HPP92_024038' => 'vpl', 'Hund05891' => 'sun', 'Hund06450' => 'sun', 'Hund12053' => 'sun', 'Hund16800' => 'sun', 'Hund21222' => 'sun', 'Hund22896' => 'sun', 'Hund23746' => 'sun', 'Hund27083' => 'sun', 'Lalb_Chr02g0141831' => 'lal', 'Lalb_Chr02g0141841' => 'lal', 'Lalb_Chr05g0220411' => 'lal', 'Lalb_Chr06g0162081' => 'lal', 'Lalb_Chr09g0327651' => 'lal', 'Lalb_Chr13g0295051' => 'lal', 'Lalb_Chr15g0086801' => 'lal', 'Lalb_Chr16g0383781' => 'lal', 'Lalb_Chr16g0383791' => 'lal', 'Lalb_Chr18g0055441' => 'lal', 'Lalb_Chr18g0059611' => 'lal', 'Lalb_Chr20g0109661' => 'lal', 'Lalb_Chr20g0109831' => 'lal', 'Lalb_Chr20g0121871' => 'lal', 'Lalb_Chr22g0355361' => 'lal', 'Lalb_Chr25g0286371' => 'lal', 'Lj1A1187G43' => 'lonja', 'Lj1A1205T50' => 'lonja', 'Lj1A800G33' => 'lonja', 'Lj1C1187T7' => 'lonja', 'Lj1C843T11' => 'lonja', 'Lj1g0010940' => 'lja', 'Lj2A288T69' => 'lonja', 'Lj3g0024276' => 'lja', 'Lj4A47T76' => 'lonja', 'Lj4g0005805' => 'lja', 'Lj4g0006097' => 'lja', 'Lj4g0008528' => 'lja', 'Lj4g0024907' => 'lja', 'Lj5g0012472' => 'lja', 'Lj5g0018648' => 'lja', 'Lj6C789G1' => 'lonja', 'Lj6g0004000' => 'lja', 'Lj7A292G67' => 'lonja', 'Lj7A292T64' => 'lonja', 'Lj9A400T58' => 'lonja', 'Lsat_1_v5_gn_1_126181' => 'lsa', 'Lsat_1_v5_gn_4_123041' => 'lsa', 'Lsat_1_v5_gn_4_133620' => 'lsa', 'Lsat_1_v5_gn_4_53221' => 'lsa', 'Lsat_1_v5_gn_4_71961' => 'lsa', 'Lsat_1_v5_gn_7_105241' => 'lsa', 'Lsat_1_v5_gn_7_21361' => 'lsa', 'Lsat_1_v5_gn_7_28860' => 'lsa', 'Lsat_1_v5_gn_7_31260' => 'lsa', 'Lsat_1_v5_gn_8_52801' => 'lsa', 'Manes.02G191400' => 'mes', 'Manes.03G110100' => 'mes', 'Manes.04G071100' => 'mes', 'Manes.05G100500' => 'mes', 'Manes.05G164700' => 'mes', 'Manes.15G087000' => 'mes', 'Manes.15G121500' => 'mes', 'Manes.16G028300' => 'mes', 'Manes.17G046100' => 'mes', 'Manes.17G069800' => 'mes', 'Manes.18G100500' => 'mes', 'Mapoly0002s0109' => 'mpo', 'Mapoly0024s0007' => 'mpo', 'Mapoly0089s0032' => 'mpo', 'MBI04_g42241_MAGBIO' => 'mbi', 'MBI05_g11988_MAGBIO' => 'mbi', 'MBI05_g35452_MAGBIO' => 'mbi', 'MBI07_g30179_MAGBIO' => 'mbi', 'MBI07_g35859_MAGBIO' => 'mbi', 'MBI07_g35860_MAGBIO' => 'mbi', 'MBI07_g37166_MAGBIO' => 'mbi', 'MBI08_g18172_MAGBIO' => 'mbi', 'MBI09_g08441_MAGBIO' => 'mbi', 'MBI13_g01676_MAGBIO' => 'mbi', 'MBI14_g42955_MAGBIO' => 'mbi', 'MBI16_g13161_MAGBIO' => 'mbi', 'MBI17_g27204_MAGBIO' => 'mbi', 'MBI19_g21595_MAGBIO' => 'mbi', 'MD00G1148400' => 'mdo', 'MD02G1301200' => 'mdo', 'MD03G1227800' => 'mdo', 'MD05G1041100' => 'mdo', 'MD05G1124800' => 'mdo', 'MD05G1284000' => 'mdo', 'MD05G1338800' => 'mdo', 'MD05G1338900' => 'mdo', 'MD07G1022800' => 'mdo', 'MD10G1047500' => 'mdo', 'MD10G1127500' => 'mdo', 'MD10G1262300' => 'mdo', 'MD10G1293800' => 'mdo', 'MD16G1074300' => 'mdo', 'Medtr1g021670' => 'mtr', 'Medtr1g096320' => 'mtr', 'Medtr2g013690' => 'mtr', 'Medtr2g019450' => 'mtr', 'Medtr2g085170' => 'mtr', 'Medtr4g088785' => 'mtr', 'Medtr8g055930' => 'mtr', 'Medtr8g085850' => 'mtr', 'MELO3C002605.2' => 'cme', 'MELO3C003891.2' => 'cme', 'MELO3C004012.2' => 'cme', 'MELO3C007134.2' => 'cme', 'MELO3C008118.2' => 'cme', 'MELO3C016700.2' => 'cme', 'MELO3C024127.2' => 'cme', 'MELO3C033361.2' => 'cme', 'MELO3C033362.2' => 'cme', 'Migut.C00430' => 'egut', 'Migut.C01246' => 'egut', 'Migut.E00101' => 'egut', 'Migut.H01486' => 'egut', 'Migut.H01939' => 'egut', 'Migut.K00360' => 'egut', 'Migut.M00910' => 'egut', 'Migut.M01139' => 'egut', 'Migut.N02677' => 'egut', 'MSTRG.13252' => 'ama', 'MSTRG.14701' => 'ama', 'MSTRG.1521' => 'ama', 'MSTRG.15884' => 'ama', 'MSTRG.16242' => 'ama', 'MSTRG.22285' => 'ama', 'MSTRG.22444' => 'ama', 'MSTRG.2349' => 'ama', 'MSTRG.26308' => 'ama', 'MSTRG.28296' => 'ama', 'MSTRG.9895' => 'ama', 'Nitab4.5_0000110g0060' => 'nta', 'Nitab4.5_0000420g0130' => 'nta', 'Nitab4.5_0000422g0030' => 'nta', 'Nitab4.5_0000560g0180' => 'nta', 'Nitab4.5_0000703g0100' => 'nta', 'Nitab4.5_0000786g0200' => 'nta', 'Nitab4.5_0001336g0020' => 'nta', 'Nitab4.5_0001796g0030' => 'nta', 'Nitab4.5_0003348g0060' => 'nta', 'Nitab4.5_0003698g0040' => 'nta', 'Nitab4.5_0003942g0090' => 'nta', 'Nitab4.5_0004775g0070' => 'nta', 'Nitab4.5_0004864g0030' => 'nta', 'Nitab4.5_0005615g0020' => 'nta', 'Nitab4.5_0009288g0030' => 'nta', 'Nitab4.5_0009341g0010' => 'nta', 'Nitab4.5_0009535g0010' => 'nta', 'Nn1g03995' => 'nnu', 'Nn1g04100' => 'nnu', 'Nn1g06530' => 'nnu', 'Nn3g16404' => 'nnu', 'Nn3g17212' => 'nnu', 'Nn3g20776' => 'nnu', 'Nn3g21923' => 'nnu', 'Nn5g27737' => 'nnu', 'Nn5g29461' => 'nnu', 'Nn7g38355' => 'nnu', 'Nn8g39873' => 'nnu', 'Oeu000548.2' => 'oeu', 'Oeu004672.1' => 'oeu', 'Oeu015605.2' => 'oeu', 'Oeu016092.1' => 'oeu', 'Oeu017879.3' => 'oeu', 'Oeu024910.1' => 'oeu', 'Oeu028965.1' => 'oeu', 'Oeu031269.1' => 'oeu', 'Oeu031270.1' => 'oeu', 'Oeu032535.1' => 'oeu', 'Oeu034151.1' => 'oeu', 'Oeu034152.1' => 'oeu', 'Oeu034588.2' => 'oeu', 'Oeu050846.1' => 'oeu', 'Oeu050849.2' => 'oeu', 'Oeu051063.2' => 'oeu', 'Oeu052368.1' => 'oeu', 'Oeu052370.1' => 'oeu', 'Os01g0210400' => 'osa', 'Os01g0304300' => 'osa', 'Os01g0749100' => 'osa', 'Os02g0745800' => 'osa', 'Os03g0769050' => 'osa', 'Os05g0531500' => 'osa', 'Os06g0724300' => 'osa', 'Os11g0198100' => 'osa', 'Peaxi162Scf00069g01425' => 'pax', 'Peaxi162Scf00280g00811' => 'pax', 'Peaxi162Scf00310g00615' => 'pax', 'Peaxi162Scf00362g00542' => 'pax', 'Peaxi162Scf00461g00310' => 'pax', 'Peaxi162Scf00530g00118' => 'pax', 'Peaxi162Scf00541g00057' => 'pax', 'Peaxi162Scf00661g00017' => 'pax', 'Peaxi162Scf00926g00027' => 'pax', 'Peaxi162Scf01064g00263' => 'pax', 'Peaxi162Scf01211g00135' => 'pax', 'PGR004G2336' => 'pgr', 'PGR042G0327' => 'pgr', 'PGR042G1957' => 'pgr', 'PGR042G2003' => 'pgr', 'PGR042G3929' => 'pgr', 'PGR083G1137' => 'pgr', 'PGR083G1364' => 'pgr', 'PGSC0003DMG400003381' => 'stu', 'PGSC0003DMG400003417' => 'stu', 'PGSC0003DMG400008981' => 'stu', 'PGSC0003DMG400012417' => 'stu', 'PGSC0003DMG400012823' => 'stu', 'PGSC0003DMG400016885' => 'stu', 'PGSC0003DMG400022812' => 'stu', 'PGSC0003DMG400029726' => 'stu', 'PGSC0003DMG401009243' => 'stu', 'PGSC0003DMG401031505' => 'stu', 'PGSC0003DMG402031505' => 'stu', 'Phvul.001G017600' => 'pvu', 'Phvul.002G193500' => 'pvu', 'Phvul.002G228900' => 'pvu', 'Phvul.002G236800' => 'pvu', 'Phvul.003G049500' => 'pvu', 'Phvul.005G072000' => 'pvu', 'Phvul.006G164800' => 'pvu', 'Phvul.006G185100' => 'pvu', 'Phvul.007G090000' => 'pvu', 'Potri.001G399800' => 'ptr', 'Potri.002G149900' => 'ptr', 'Potri.004G044100' => 'ptr', 'Potri.004G177600' => 'ptr', 'Potri.009G138000' => 'ptr', 'Potri.010G094000' => 'ptr', 'Potri.011G053000' => 'ptr', 'Potri.011G119300' => 'ptr', 'Potri.013G113700' => 'ptr', 'Potri.018G107800' => 'ptr', 'Potri.019G084100' => 'ptr', 'Pp3c14_23720' => 'ppa', 'Pp3c16_6340' => 'ppa', 'Pp3c23_13420' => 'ppa', 'Pp3c24_2740' => 'ppa', 'Pp3c25_860' => 'ppa', 'Pp3c8_21750' => 'ppa', 'Prupe.1G273000' => 'ppe', 'Prupe.1G273700' => 'ppe', 'Prupe.1G274100' => 'ppe', 'Prupe.2G023300' => 'ppe', 'Prupe.4G048000' => 'ppe', 'Prupe.4G080400' => 'ppe', 'Prupe.4G181200' => 'ppe', 'Prupe.8G056900' => 'ppe', 'Prupe.8G168700' => 'ppe', 'Psat1g189080' => 'psa', 'Psat1g204760' => 'psa', 'Psat4g175560' => 'psa', 'Psat4g177720' => 'psa', 'Psat5g244240' => 'psa', 'Psat6g010720' => 'psa', 'Psat6g187200' => 'psa', 'Psat7g072040' => 'psa', 'PSO017G3501' => 'pso', 'PSO063G2148' => 'pso', 'PSO063G5608' => 'pso', 'PSO210G6392' => 'pso', 'PSO541G2319' => 'pso', 'PSO541G2836' => 'pso', 'PSO541G4012' => 'pso', 'PSO541G6253' => 'pso', 'PSO675G0580' => 'pso', 'PSO675G0856' => 'pso', 'PSO675G5635' => 'pso', 'PSO675G9157' => 'pso', 'PSO832G1660' => 'pso', 'PSO832G1969' => 'pso', 'QL02p007186' => 'qlo', 'QL02p033904' => 'qlo', 'QL03p064391' => 'qlo', 'QL05p040593' => 'qlo', 'QL05p058242' => 'qlo', 'QL08p021825' => 'qlo', 'QL11p004981' => 'qlo', 'RcHm_v2.0_Chr1g0318301' => 'rch', 'RcHm_v2.0_Chr4g0418501' => 'rch', 'RcHm_v2.0_Chr4g0439971' => 'rch', 'RcHm_v2.0_Chr5g0008541' => 'rch', 'RcHm_v2.0_Chr5g0014101' => 'rch', 'RcHm_v2.0_Chr5g0014131' => 'rch', 'RcHm_v2.0_Chr5g0033621' => 'rch', 'RcHm_v2.0_Chr6g0272041' => 'rch', 'RcHm_v2.0_Chr6g0278831' => 'rch', 'Rhsim02G0130400' => 'rsi', 'Rhsim02G0171100' => 'rsi', 'Rhsim05G0053000' => 'rsi', 'Rhsim05G0053100' => 'rsi', 'Rhsim06G0096500' => 'rsi', 'Rhsim06G0096600' => 'rsi', 'Rhsim06G0199100' => 'rsi', 'Rhsim12G0062300' => 'rsi', 'Rhsim12G0062800' => 'rsi', 'Sabra02G0118600' => 'sbr', 'Sabra04G0027300' => 'sbr', 'Sabra04G0119500' => 'sbr', 'Sabra08G0112500' => 'sbr', 'Sabra11G0036800' => 'sbr', 'Sabra11G0103800' => 'sbr', 'Sabra13G0096300' => 'sbr', 'Sabra16G0262300' => 'sbr', 'Sabra18G0091700' => 'sbr', 'Sabra19G0095400' => 'sbr', 'SalBow6G3080' => 'sbo', 'SalBow7G1157' => 'sbo', 'SalBow7G2123' => 'sbo', 'SalBow7G2285' => 'sbo', 'SalBow7G3537' => 'sbo', 'SalBow8G2947' => 'sbo', 'SalBow8G4463' => 'sbo', 'SalBow8G5466' => 'sbo', 'Sc01g0001750' => 'sci', 'Sc02g0006640' => 'sci', 'Sc02g0006670' => 'sci', 'Sc04g0008220' => 'sci', 'Sc05g0006190' => 'sci', 'Sc08g0002760' => 'sci', 'Sc17g0006170' => 'sci', 'Sc22g0002050' => 'sci', 'Sc23g0001190' => 'sci', 'Sc24g0000980' => 'sci', 'Sed0006245' => 'sed', 'Sed0007543' => 'sed', 'Sed0009411' => 'sed', 'Sed0010765' => 'sed', 'Sed0012944' => 'sed', 'Sed0014682' => 'sed', 'Sed0016174' => 'sed', 'Sed0016796' => 'sed', 'Sed0020317' => 'sed', 'Sed0021467' => 'sed', 'SEGI_01316' => 'sgi', 'SEGI_03374' => 'sgi', 'SEGI_16265' => 'sgi', 'SEGI_18569' => 'sgi', 'SEGI_20351' => 'sgi', 'SEGI_26395' => 'sgi', 'SEGI_29469' => 'sgi', 'SEGI_34771' => 'sgi', 'SEGI_36769' => 'sgi', 'SEGI_37139' => 'sgi', 'SGA_v2.0_scaffold100G29687' => 'sas', 'SGA_v2.0_scaffold118G32472' => 'sas', 'SGA_v2.0_scaffold14G07051' => 'sas', 'SGA_v2.0_scaffold183G39845' => 'sas', 'SGA_v2.0_scaffold1G00174' => 'sas', 'SGA_v2.0_scaffold22G09714' => 'sas', 'SGA_v2.0_scaffold333G48992' => 'sas', 'SGA_v2.0_scaffold46G17491' => 'sas', 'SGA_v2.0_scaffold49G18294' => 'sas', 'SGA_v2.0_scaffold63G21658' => 'sas', 'SHI01741' => 'shi', 'SHI05771' => 'shi', 'SHI18077' => 'shi', 'SHI20525' => 'shi', 'SHI20527' => 'shi', 'SHI20528' => 'shi', 'SMO172G0185' => 'smo', 'SMO198G0020' => 'smo', 'SMO351G0006' => 'smo', 'SMO356G0118' => 'smo', 'SMO358G0296' => 'smo', 'SMO367G0079' => 'smo', 'SMO367G1277' => 'smo', 'Solyc01g014220.3' => 'sly', 'Solyc01g111770.2' => 'sly', 'Solyc02g078180.3' => 'sly', 'Solyc03g006430.3' => 'sly', 'Solyc03g006456.1' => 'sly', 'Solyc03g079860.2' => 'sly', 'Solyc04g079770.3' => 'sly', 'Solyc05g007430.4' => 'sly', 'Solyc07g063150.3' => 'sly', 'Solyc08g016620.3' => 'sly', 'Solyc09g057590.3' => 'sly', 'Solyc09g057600.1' => 'sly', 'Solyc10g009050.3' => 'sly', 'Solyc11g017420.2' => 'sly', 'Sopen01g053810' => 'spe', 'Sopen02g023040' => 'spe', 'Sopen03g002440' => 'spe', 'Sopen04g033350' => 'spe', 'Sopen05g003310' => 'spe', 'Sopen07g004050' => 'spe', 'Sopen07g031340' => 'spe', 'Sopen08g006990' => 'spe', 'Sopen10g004830' => 'spe', 'Sopen11g009370' => 'spe', 'Sp1g24450' => 'spa', 'Sp1g29670' => 'spa', 'Sp1g39600' => 'spa', 'Sp2g11080' => 'spa', 'Sp2g13970' => 'spa', 'Sp4g16130' => 'spa', 'Sp6g13080' => 'spa', 'Sp7g37270' => 'spa', 'TAR371G0065' => 'tar', 'TAR376G0340' => 'tar', 'TAR376G0435' => 'tar', 'TAR381G0002' => 'tar', 'TAR381G1236' => 'tar', 'TAR624G0055' => 'tar', 'TAR624G0324' => 'tar', 'TAR624G0696' => 'tar', 'TAR624G0906' => 'tar', 'TAR625G0107' => 'tar', 'TAR626G0015' => 'tar', 'TAR626G1356' => 'tar', 'TAR627G0888' => 'tar', 'TAR628G0399' => 'tar', 'TAR628G1327' => 'tar', 'TAR629G2831' => 'tar', 'TAR629G2874' => 'tar', 'TAR633G1432' => 'tar', 'TAR633G2771' => 'tar', 'THA.LOC104803394' => 'tha', 'THA.LOC104805153' => 'tha', 'THA.LOC104806784' => 'tha', 'THA.LOC104810473' => 'tha', 'THA.LOC104813100' => 'tha', 'THA.LOC104814215' => 'tha', 'THA.LOC104815554' => 'tha', 'THA.LOC104820544' => 'tha', 'THA.LOC104824754' => 'tha', 'THA.LOC104827717' => 'tha', 'Thecc.02G031400' => 'tca', 'Thecc.02G055900' => 'tca', 'Thecc.02G350800' => 'tca', 'Thecc.06G150900' => 'tca', 'Thecc.06G186600' => 'tca', 'Thecc.07G089600' => 'tca', 'Thecc.08G020400' => 'tca', 'Thecc.08G182100' => 'tca', 'Thhalv10000873m.g' => 'esa', 'Thhalv10004185m.g' => 'esa', 'Thhalv10006981m.g' => 'esa', 'Thhalv10007204m.g' => 'esa', 'Thhalv10011374m.g' => 'esa', 'Thhalv10013482m.g' => 'esa', 'Thhalv10017801m.g' => 'esa', 'Thhalv10024983m.g' => 'esa', 'TPR.G12072' => 'tpr', 'TPR.G15769' => 'tpr', 'TPR.G16504' => 'tpr', 'TPR.G16506' => 'tpr', 'TPR.G24345' => 'tpr', 'TPR.G26666' => 'tpr', 'TPR.G27320' => 'tpr', 'TPR.G31819' => 'tpr', 'TPR.G38879' => 'tpr', 'TPR.G39015' => 'tpr', 'TPR.G8819' => 'tpr', 'TWI09G0924' => 'twi', 'TWI12G0811' => 'twi', 'TWI12G1294' => 'twi', 'TWI31G0150' => 'twi', 'TWI36G1262' => 'twi', 'TWI38G1287' => 'twi', 'TWI38G1633' => 'twi', 'TWI38G1982' => 'twi', 'TWI39G0116' => 'twi', 'TWI60G1011' => 'twi', 'TWI63G0171' => 'twi', 'TWI73G0839' => 'twi', 'TWI79G1511' => 'twi', 'unitig_0.g915' => 'ugi', 'unitig_0.g916' => 'ugi', 'unitig_21.g20219' => 'ugi', 'unitig_21.g20416' => 'ugi', 'unitig_578.g16132' => 'ugi', 'unitig_578.g16718' => 'ugi', 'unitig_62.g23481' => 'ugi', 'unitig_744.g24535' => 'ugi', 'unitig_749.g13525' => 'ugi', 'vmacro01248' => 'vma', 'vmacro02290' => 'vma', 'vmacro10946' => 'vma', 'vmacro11865' => 'vma', 'vmacro12493' => 'vma', 'vmacro17322' => 'vma', 'vmacro21599' => 'vma', 'vmacro23041' => 'vma', 'VMungo0251G0004' => 'vmu', 'VMungo0251G2639' => 'vmu', 'VMungo0251G2967' => 'vmu', 'VMungo0540G0864' => 'vmu', 'VMungo0540G1569' => 'vmu', 'VMungo0647G0317' => 'vmu', 'VMungo0720G1373' => 'vmu', 'VMungo0720G1508' => 'vmu', 'VMungo1080G0485' => 'vmu', 'VMungo1215G3177' => 'vmu', 'Zm00001eb112600' => 'zma', 'Zm00001eb120220' => 'zma', 'Zm00001eb153240' => 'zma', 'Zm00001eb168880' => 'zma', 'Zm00001eb213920' => 'zma', 'Zm00001eb228280' => 'zma', 'Zm00001eb254580' => 'zma', 'Zm00001eb272180' => 'zma', 'Zm00001eb293190' => 'zma', 'Zm00001eb322930' => 'zma', 'Zm00001eb353360' => 'zma', 'Zm00001eb353390' => 'zma', 'Zm00001eb353430' => 'zma', 'Zm00001eb353440' => 'zma', 'Zm00001eb353780' => 'zma' ), 'gf_id' => 'HOM05D000499', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000499' ), 'data_identifier' => 'HOM05D000499', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000499', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1066', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p29780' => 'bna', 'A02p33180' => 'bna', 'A03p16470' => 'bna', 'A03p66010' => 'bna', 'A04p25970' => 'bna', 'A06p01270' => 'bna', 'A06p46080' => 'bna', 'A07p11400' => 'bna', 'A08p01840' => 'bna', 'A08p08230' => 'bna', 'A08p25740' => 'bna', 'A09p32070' => 'bna', 'A09p37830' => 'bna', 'A09p42840' => 'bna', 'A09p42850' => 'bna', 'Aa31LG10G2060' => 'aar', 'Aa31LG2G7410' => 'aar', 'Aa31LG6G10200' => 'aar', 'Aa31LG6G16680' => 'aar', 'Aa31LG6G8470' => 'aar', 'Aa31LG9G12730' => 'aar', 'Aa31LG9G13680' => 'aar', 'Aa31LG9G14920' => 'aar', 'Aa31LG9G6650' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4977' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5467' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3254' => 'aag', 'Actinidia02578' => 'ach', 'Actinidia07693' => 'ach', 'Actinidia08413' => 'ach', 'Actinidia08414' => 'ach', 'Actinidia15289' => 'ach', 'Actinidia19871' => 'ach', 'Actinidia21475' => 'ach', 'Actinidia22576' => 'ach', 'Actinidia28327' => 'ach', 'Actinidia32491' => 'ach', 'Actinidia39463' => 'ach', 'Actinidia39571' => 'ach', 'Ah.01g013750' => 'amhyb', 'Ah.01g023210' => 'amhyb', 'Ah.04g164850' => 'amhyb', 'Ah.05g178060' => 'amhyb', 'Ah.07g204270' => 'amhyb', 'Ah.07g208480' => 'amhyb', 'Ah.09g237410' => 'amhyb', 'Ah.14g089460' => 'amhyb', 'AL1G41790' => 'aly', 'AL1G49050' => 'aly', 'AL1G53810' => 'aly', 'AL1G61400' => 'aly', 'AL4G18580' => 'aly', 'AL5G12510' => 'aly', 'AL5G12540' => 'aly', 'AL6G43230' => 'aly', 'AL7G10370' => 'aly', 'AL7G19250' => 'aly', 'AL8G12240' => 'aly', 'AL8G18540' => 'aly', 'Aqoxy1G02409' => 'aox', 'Aqoxy2G03993' => 'aox', 'Aqoxy3G03357' => 'aox', 'Aqoxy4G00785' => 'aox', 'Aqoxy5G02598' => 'aox', 'Aqoxy6G00132' => 'aox', 'Aqoxy7G01776' => 'aox', 'Aqoxy7G02316' => 'aox', 'Aqoxy7G03973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.12AFKW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B8730' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27IQR1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3F75VG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3RE0GA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41TCQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.527VTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FIR39' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5W8UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DA38EV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ63HS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H1I32C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HC27T5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4M8AP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7N3CZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9UVDZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LS1NQA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT1D4B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SKC4TM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCFV76' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF9Q1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQWD9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1ZM88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WE07RT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YCK7VH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJE6Q6' => 'arhy', 'AT1G28240' => 'ath', 'AT1G34550' => 'ath', 'AT1G53040' => 'ath', 'AT2G02910' => 'ath', 'AT4G09630' => 'ath', 'AT4G38500' => 'ath', 'AT5G42660' => 'ath', 'AT5G46220' => 'ath', 'ATR0152G026' => 'atr', 'ATR0564G343' => 'atr', 'ATR0706G151' => 'atr', 'ATR0733G207' => 'atr', 'ATR0751G234' => 'atr', 'ATR0807G048' => 'atr', 'ATR1091G084' => 'atr', 'Atru.chr10.1229' => 'acertr', 'Atru.chr10.1230' => 'acertr', 'Atru.chr10.1874' => 'acertr', 'Atru.chr11.1808' => 'acertr', 'Atru.chr13.1795' => 'acertr', 'Atru.chr13.570' => 'acertr', 'Atru.chr2.2608' => 'acertr', 'Atru.chr2.2609' => 'acertr', 'Atru.chr5.3428' => 'acertr', 'Atru.chr8.1171' => 'acertr', 'AUR62004651' => 'cqu', 'AUR62008675' => 'cqu', 'AUR62010014' => 'cqu', 'AUR62013004' => 'cqu', 'AUR62014825' => 'cqu', 'AUR62015015' => 'cqu', 'AUR62015151' => 'cqu', 'AUR62017020' => 'cqu', 'AUR62019422' => 'cqu', 'AUR62023570' => 'cqu', 'AUR62025571' => 'cqu', 'AUR62029098' => 'cqu', 'AUR62033863' => 'cqu', 'AUR62034296' => 'cqu', 'AUR62040075' => 'cqu', 'BcaB02g07334' => 'bca', 'BcaB02g10575' => 'bca', 'BcaB03g12119' => 'bca', 'BcaB03g12120' => 'bca', 'BcaB03g13945' => 'bca', 'BcaB04g17123' => 'bca', 'BcaB04g17867' => 'bca', 'BcaB04g19839' => 'bca', 'BcaB07g30317' => 'bca', 'BcaB07g32432' => 'bca', 'BcaB07g33362' => 'bca', 'BcaB08g36611' => 'bca', 'BcaC01g00028' => 'bca', 'BcaC01g01356' => 'bca', 'BcaC01g02034' => 'bca', 'BcaC01g06051' => 'bca', 'BcaC03g16839' => 'bca', 'BcaC03g17176' => 'bca', 'BcaC05g26829' => 'bca', 'BcaC06g31490' => 'bca', 'BcaC06g35344' => 'bca', 'BcaC06g36570' => 'bca', 'BcaC07g37537' => 'bca', 'BcaC08g43491' => 'bca', 'BcaC08g43773' => 'bca', 'BcaNung00234' => 'bca', 'BcaNung01982' => 'bca', 'BcaNung03707' => 'bca', 'BcaNung06454' => 'bca', 'BolC2t10762H' => 'bol', 'BolC2t11191H' => 'bol', 'BolC3t14322H' => 'bol', 'BolC3t19747H' => 'bol', 'BolC3t21425H' => 'bol', 'BolC4t27800H' => 'bol', 'BolC5t31423H' => 'bol', 'BolC6t35951H' => 'bol', 'BolC6t36282H' => 'bol', 'BolC7t40678H' => 'bol', 'BolC7t40679H' => 'bol', 'BolC7t42222H' => 'bol', 'BolC7t43492H' => 'bol', 'BolC7t46785H' => 'bol', 'BolC8t47853H' => 'bol', 'BolC9t56805H' => 'bol', 'BraA02t08000Z' => 'bra', 'BraA02t08341Z' => 'bra', 'BraA03t10936Z' => 'bra', 'BraA03t15657Z' => 'bra', 'BraA04t18100Z' => 'bra', 'BraA05t20523Z' => 'bra', 'BraA06t23353Z' => 'bra', 'BraA06t27473Z' => 'bra', 'BraA06t27769Z' => 'bra', 'BraA07t28928Z' => 'bra', 'BraA08t32236Z' => 'bra', 'BraA08t32841Z' => 'bra', 'BraA08t34524Z' => 'bra', 'BraA09t38742Z' => 'bra', 'BraA09t39295Z' => 'bra', 'C02p47180' => 'bna', 'C02p50990' => 'bna', 'C03p19360' => 'bna', 'C03p74950' => 'bna', 'C03p91000' => 'bna', 'C04p63260' => 'bna', 'C05p27050' => 'bna', 'C06p08750' => 'bna', 'C06p11490' => 'bna', 'C07p02820' => 'bna', 'C07p17180' => 'bna', 'C07p29440' => 'bna', 'C07p63730' => 'bna', 'C09p39260' => 'bna', 'CAN.G1164.34' => 'can', 'CAN.G1164.39' => 'can', 'CAN.G1530.3' => 'can', 'CAN.G162.61' => 'can', 'CAN.G176.6' => 'can', 'CAN.G289.49' => 'can', 'CAN.G370.21' => 'can', 'CAN.G370.22' => 'can', 'CAN.G371.117' => 'can', 'CAN.G58.37' => 'can', 'CAN.G588.98' => 'can', 'CANSAT21G2266' => 'cansat', 'CANSAT25G2799' => 'cansat', 'CANSAT35G0862' => 'cansat', 'CANSAT35G1704' => 'cansat', 'CANSAT35G1760' => 'cansat', 'CANSAT56G3971' => 'cansat', 'CANSAT56G4116' => 'cansat', 'CANSAT80G1259' => 'cansat', 'CARHR027730' => 'chi', 'CARHR033880' => 'chi', 'CARHR043270' => 'chi', 'CARHR145330' => 'chi', 'CARHR145340' => 'chi', 'CARHR175570' => 'chi', 'CARHR181570' => 'chi', 'CARHR258470' => 'chi', 'CARHR260490' => 'chi', 'CARHR294220' => 'chi', 'Carub.0001s2668' => 'cru', 'Carub.0001s3257' => 'cru', 'Carub.0001s4220' => 'cru', 'Carub.0005s0179' => 'cru', 'Carub.0006s2807' => 'cru', 'Carub.0007s0039' => 'cru', 'Carub.0008s0169' => 'cru', 'Carub.0008s0636' => 'cru', 'Ca_00338_v3' => 'car', 'Ca_00542_v3' => 'car', 'Ca_01844_v3' => 'car', 'Ca_10611_v3' => 'car', 'Ca_13326_v3' => 'car', 'Ca_17944_v3' => 'car', 'Ca_18546_v3' => 'car', 'Ca_24219_v3' => 'car', 'Ca_29972_v3' => 'car', 'CBR_g3681' => 'cbr', 'CBR_g40021' => 'cbr', 'Cc01_g08140' => 'ccan', 'Cc02_g13410' => 'ccan', 'Cc02_g37480' => 'ccan', 'Cc05_g12030' => 'ccan', 'Cc09_g03370' => 'ccan', 'Cc09_g10300' => 'ccan', 'Cc10_g03530' => 'ccan', 'Cc10_g11380' => 'ccan', 'CDE01G0176' => 'cde', 'CDE02G0675' => 'cde', 'CDE02G0942' => 'cde', 'CDE02G1153' => 'cde', 'CDE02G4177' => 'cde', 'CDE04G2117' => 'cde', 'CDE04G2736' => 'cde', 'CDE08G1161' => 'cde', 'CDE09G1238' => 'cde', 'Cfa000467' => 'cfa', 'Cfa000947' => 'cfa', 'Cfa004969' => 'cfa', 'Cfa005284' => 'cfa', 'Cfa008993' => 'cfa', 'Cfa018187' => 'cfa', 'Cfa018454' => 'cfa', 'Cfa020585' => 'cfa', 'Ciclev10000424m.g' => 'ccl', 'Ciclev10003605m.g' => 'ccl', 'Ciclev10007828m.g' => 'ccl', 'Ciclev10014620m.g' => 'ccl', 'Ciclev10015169m.g' => 'ccl', 'Ciclev10018291m.g' => 'ccl', 'Ciclev10028256m.g' => 'ccl', 'Ciclev10033822m.g' => 'ccl', 'CiPaw.05G060300' => 'cil', 'CiPaw.05G085000' => 'cil', 'CiPaw.06G083700' => 'cil', 'CiPaw.06G120300' => 'cil', 'CiPaw.09G060500' => 'cil', 'CiPaw.09G123800' => 'cil', 'CiPaw.11G169700' => 'cil', 'CiPaw.12G118300' => 'cil', 'CiPaw.15G071000' => 'cil', 'CiPaw.15G081900' => 'cil', 'ClCG01G024610' => 'cla', 'ClCG03G006070' => 'cla', 'ClCG05G019250' => 'cla', 'ClCG09G009500' => 'cla', 'ClCG11G008200' => 'cla', 'ClCG11G018080' => 'cla', 'COL.COLO4_17373' => 'col', 'COL.COLO4_22994' => 'col', 'COL.COLO4_26389' => 'col', 'COL.COLO4_27170' => 'col', 'COL.COLO4_31074' => 'col', 'COL.COLO4_31465' => 'col', 'COL.COLO4_36438' => 'col', 'COL.COLO4_36439' => 'col', 'Cpa.g.c38781' => 'cpa', 'Cpa.g.sc128.12' => 'cpa', 'Cpa.g.sc166.7' => 'cpa', 'Cpa.g.sc166.8' => 'cpa', 'Cpa.g.sc20.111' => 'cpa', 'Cpa.g.sc27.31' => 'cpa', 'Cpa.g.sc64.36' => 'cpa', 'Cpa.g.sc64.37' => 'cpa', 'Cpa.g.sc66.49' => 'cpa', 'Cpa.g.sc80.64' => 'cpa', 'CsaV3_1G012320' => 'csa', 'CsaV3_2G008480' => 'csa', 'CsaV3_2G033450' => 'csa', 'CsaV3_3G044830' => 'csa', 'CsaV3_4G033710' => 'csa', 'CsaV3_6G051730' => 'csa', 'CsaV3_7G025350' => 'csa', 'CSS0001067' => 'camsi', 'CSS0005996' => 'camsi', 'CSS0006590' => 'camsi', 'CSS0009673' => 'camsi', 'CSS0010201' => 'camsi', 'CSS0010549' => 'camsi', 'CSS0011364' => 'camsi', 'CSS0014473' => 'camsi', 'CSS0014961' => 'camsi', 'CSS0020191' => 'camsi', 'CSS0021165' => 'camsi', 'CSS0022306' => 'camsi', 'CSS0030591' => 'camsi', 'CSS0030696' => 'camsi', 'CSS0032653' => 'camsi', 'CSS0037487' => 'camsi', 'CSS0041102' => 'camsi', 'CSS0041261' => 'camsi', 'CSS0046246' => 'camsi', 'CSS0049256' => 'camsi', 'DCAR_004075' => 'dca', 'DCAR_011538' => 'dca', 'DCAR_019553' => 'dca', 'DCAR_020952' => 'dca', 'DCAR_021739' => 'dca', 'DCAR_027407' => 'dca', 'DCAR_027913' => 'dca', 'DCAR_028066' => 'dca', 'Dinv05899' => 'din', 'Dinv07563' => 'din', 'Dinv08010' => 'din', 'Dinv14125' => 'din', 'Dinv20172' => 'din', 'Dinv30743' => 'din', 'Dinv31229' => 'din', 'Dinv34162' => 'din', 'Dinv36028' => 'din', 'Dinv39368' => 'din', 'Dinv40565' => 'din', 'Dinv41706' => 'din', 'Duzib052G0089' => 'dzi', 'Duzib116G0641' => 'dzi', 'Duzib132G0069' => 'dzi', 'Duzib132G1219' => 'dzi', 'Duzib147G0278' => 'dzi', 'Duzib160G0480' => 'dzi', 'Duzib170G0661' => 'dzi', 'Duzib177G0591' => 'dzi', 'Duzib187G1353' => 'dzi', 'Duzib192G0858' => 'dzi', 'Duzib192G0883' => 'dzi', 'Duzib213G0506' => 'dzi', 'Duzib235G0289' => 'dzi', 'Duzib251G0422' => 'dzi', 'ECA232G3898' => 'eca', 'ECA233G5950' => 'eca', 'ECA234G1699' => 'eca', 'ECA234G2421' => 'eca', 'ECA236G0426' => 'eca', 'ECA236G4331' => 'eca', 'ECA248G2573' => 'eca', 'EL10Ac1g00077' => 'bvu', 'EL10Ac1g01746' => 'bvu', 'EL10Ac2g03464' => 'bvu', 'EL10Ac4g08176' => 'bvu', 'EL10Ac7g17521' => 'bvu', 'EL10Ac8g20386' => 'bvu', 'EL10Ac9g21343' => 'bvu', 'EL10Ac9g22688' => 'bvu', 'Eucgr.B03434' => 'egr', 'Eucgr.D00618' => 'egr', 'Eucgr.E02395' => 'egr', 'Eucgr.F01129' => 'egr', 'Eucgr.F02622' => 'egr', 'Eucgr.F04207' => 'egr', 'FAN01G0570' => 'fan', 'FAN03G3351' => 'fan', 'FAN06G3702' => 'fan', 'FAN07G2149' => 'fan', 'FAN10G3758' => 'fan', 'FAN11G1170' => 'fan', 'FAN11G2050' => 'fan', 'FAN11G2724' => 'fan', 'FAN12G1700' => 'fan', 'FAN12G2028' => 'fan', 'FAN15G1160' => 'fan', 'FAN15G3063' => 'fan', 'FAN16G2540' => 'fan', 'FAN16G3077' => 'fan', 'FAN16G3624' => 'fan', 'FAN17G0221' => 'fan', 'FAN20G2492' => 'fan', 'FAN20G2905' => 'fan', 'FAN21G0548' => 'fan', 'FAN21G1300' => 'fan', 'FAN22G0077' => 'fan', 'FAN22G1315' => 'fan', 'FAN24G1280' => 'fan', 'FAN24G1445' => 'fan', 'FAN24G3527' => 'fan', 'FAN25G0464' => 'fan', 'FAN25G2885' => 'fan', 'FAN25G3270' => 'fan', 'FAN27G1101' => 'fan', 'FAN27G2846' => 'fan', 'FAN27G3524' => 'fan', 'FvH4_2g11770' => 'fve', 'FvH4_2g15630' => 'fve', 'FvH4_3g05570' => 'fve', 'FvH4_3g09110' => 'fve', 'FvH4_3g19940' => 'fve', 'FvH4_4g04821' => 'fve', 'FvH4_4g31480' => 'fve', 'FvH4_7g01740' => 'fve', 'Glyma.05G130400' => 'gma', 'Glyma.05G156400' => 'gma', 'Glyma.07G197000' => 'gma', 'Glyma.08G085151' => 'gma', 'Glyma.08G114500' => 'gma', 'Glyma.08G300400' => 'gma', 'Glyma.10G215800' => 'gma', 'Glyma.12G224400' => 'gma', 'Glyma.13G179300' => 'gma', 'Glyma.13G218151' => 'gma', 'Glyma.13G238800' => 'gma', 'Glyma.13G276900' => 'gma', 'Glyma.14G078200' => 'gma', 'Glyma.15G074500' => 'gma', 'Glyma.15G094100' => 'gma', 'Glyma.17G247200' => 'gma', 'Glyma.18G120100' => 'gma', 'Glyma.20G176000' => 'gma', 'Gohir.A01G063600' => 'ghi', 'Gohir.A01G170301' => 'ghi', 'Gohir.A02G060500' => 'ghi', 'Gohir.A05G133850' => 'ghi', 'Gohir.A05G161400' => 'ghi', 'Gohir.A06G012900' => 'ghi', 'Gohir.A06G035901' => 'ghi', 'Gohir.A06G127100' => 'ghi', 'Gohir.A06G210500' => 'ghi', 'Gohir.A08G008650' => 'ghi', 'Gohir.A09G072700' => 'ghi', 'Gohir.A09G088301' => 'ghi', 'Gohir.A10G040600' => 'ghi', 'Gohir.A12G036300' => 'ghi', 'Gohir.A12G143350' => 'ghi', 'Gohir.A12G165500' => 'ghi', 'Gohir.A13G145700' => 'ghi', 'Gohir.D01G050000' => 'ghi', 'Gohir.D01G051366' => 'ghi', 'Gohir.D01G161350' => 'ghi', 'Gohir.D02G065900' => 'ghi', 'Gohir.D05G164200' => 'ghi', 'Gohir.D05G355500' => 'ghi', 'Gohir.D06G010400' => 'ghi', 'Gohir.D06G111250' => 'ghi', 'Gohir.D06G132000' => 'ghi', 'Gohir.D06G210500' => 'ghi', 'Gohir.D07G165675' => 'ghi', 'Gohir.D08G062240' => 'ghi', 'Gohir.D08G086101' => 'ghi', 'Gohir.D08G138060' => 'ghi', 'Gohir.D09G072300' => 'ghi', 'Gohir.D10G041400' => 'ghi', 'Gohir.D11G191020' => 'ghi', 'Gohir.D11G212066' => 'ghi', 'Gohir.D12G036300' => 'ghi', 'Gohir.D12G168600' => 'ghi', 'Gohir.D13G150600' => 'ghi', 'Gorai.001G057300' => 'gra', 'Gorai.002G069900' => 'gra', 'Gorai.002G200000' => 'gra', 'Gorai.003G067600' => 'gra', 'Gorai.005G074800' => 'gra', 'Gorai.006G087300' => 'gra', 'Gorai.008G037500' => 'gra', 'Gorai.008G181400' => 'gra', 'Gorai.009G169400' => 'gra', 'Gorai.009G387900' => 'gra', 'Gorai.010G013300' => 'gra', 'Gorai.010G153800' => 'gra', 'Gorai.010G255800' => 'gra', 'Gorai.011G043700' => 'gra', 'Gorai.011G198900' => 'gra', 'Gorai.013G168400' => 'gra', 'GSVIVG01005212001' => 'vvi', 'GSVIVG01006163001' => 'vvi', 'GSVIVG01009625001' => 'vvi', 'GSVIVG01014338001' => 'vvi', 'GSVIVG01020005001' => 'vvi', 'GSVIVG01021450001' => 'vvi', 'GSVIVG01023975001' => 'vvi', 'GSVIVG01034490001' => 'vvi', 'HanXRQChr04g0112071' => 'han', 'HanXRQChr05g0131151' => 'han', 'HanXRQChr09g0262371' => 'han', 'HanXRQChr09g0268401' => 'han', 'HanXRQChr10g0279241' => 'han', 'HanXRQChr10g0297961' => 'han', 'HanXRQChr11g0326231' => 'han', 'HanXRQChr11g0328471' => 'han', 'HanXRQChr16g0507941' => 'han', 'HanXRQChr17g0560211' => 'han', 'Haze_02108' => 'cav', 'Haze_02428' => 'cav', 'Haze_05593' => 'cav', 'Haze_06448' => 'cav', 'Haze_09427' => 'cav', 'Haze_12022' => 'cav', 'Haze_17612' => 'cav', 'Haze_17928' => 'cav', 'Hma1.2p1_0032F.1_g019250' => 'hma', 'Hma1.2p1_0163F.1_g072690' => 'hma', 'Hma1.2p1_0265F.1_g106710' => 'hma', 'Hma1.2p1_0286F.1_g113970' => 'hma', 'Hma1.2p1_0363F.1_g136640' => 'hma', 'Hma1.2p1_0584F.1_g183470' => 'hma', 'Hma1.2p1_0885F.1_g232570' => 'hma', 'HPP92_006022' => 'vpl', 'HPP92_007320' => 'vpl', 'HPP92_011521' => 'vpl', 'HPP92_019387' => 'vpl', 'HPP92_024038' => 'vpl', 'Hund05891' => 'sun', 'Hund06450' => 'sun', 'Hund12053' => 'sun', 'Hund16800' => 'sun', 'Hund21222' => 'sun', 'Hund22896' => 'sun', 'Hund23746' => 'sun', 'Hund27083' => 'sun', 'Lalb_Chr02g0141831' => 'lal', 'Lalb_Chr02g0141841' => 'lal', 'Lalb_Chr05g0220411' => 'lal', 'Lalb_Chr06g0162081' => 'lal', 'Lalb_Chr09g0327651' => 'lal', 'Lalb_Chr13g0295051' => 'lal', 'Lalb_Chr15g0086801' => 'lal', 'Lalb_Chr16g0383781' => 'lal', 'Lalb_Chr16g0383791' => 'lal', 'Lalb_Chr18g0055441' => 'lal', 'Lalb_Chr18g0059611' => 'lal', 'Lalb_Chr20g0109661' => 'lal', 'Lalb_Chr20g0109831' => 'lal', 'Lalb_Chr20g0121871' => 'lal', 'Lalb_Chr22g0355361' => 'lal', 'Lalb_Chr25g0286371' => 'lal', 'Lj1A1187G43' => 'lonja', 'Lj1A1205T50' => 'lonja', 'Lj1A800G33' => 'lonja', 'Lj1C1187T7' => 'lonja', 'Lj1C843T11' => 'lonja', 'Lj1g0010940' => 'lja', 'Lj2A288T69' => 'lonja', 'Lj3g0024276' => 'lja', 'Lj4A47T76' => 'lonja', 'Lj4g0005805' => 'lja', 'Lj4g0006097' => 'lja', 'Lj4g0008528' => 'lja', 'Lj4g0024907' => 'lja', 'Lj5g0012472' => 'lja', 'Lj5g0018648' => 'lja', 'Lj6C789G1' => 'lonja', 'Lj6g0004000' => 'lja', 'Lj7A292G67' => 'lonja', 'Lj7A292T64' => 'lonja', 'Lj9A400T58' => 'lonja', 'Lsat_1_v5_gn_1_126181' => 'lsa', 'Lsat_1_v5_gn_4_123041' => 'lsa', 'Lsat_1_v5_gn_4_133620' => 'lsa', 'Lsat_1_v5_gn_4_53221' => 'lsa', 'Lsat_1_v5_gn_4_71961' => 'lsa', 'Lsat_1_v5_gn_7_105241' => 'lsa', 'Lsat_1_v5_gn_7_21361' => 'lsa', 'Lsat_1_v5_gn_7_28860' => 'lsa', 'Lsat_1_v5_gn_7_31260' => 'lsa', 'Lsat_1_v5_gn_8_52801' => 'lsa', 'Manes.02G191400' => 'mes', 'Manes.03G110100' => 'mes', 'Manes.04G071100' => 'mes', 'Manes.05G100500' => 'mes', 'Manes.05G164700' => 'mes', 'Manes.15G087000' => 'mes', 'Manes.15G121500' => 'mes', 'Manes.16G028300' => 'mes', 'Manes.17G046100' => 'mes', 'Manes.17G069800' => 'mes', 'Manes.18G100500' => 'mes', 'Mapoly0002s0109' => 'mpo', 'Mapoly0024s0007' => 'mpo', 'Mapoly0089s0032' => 'mpo', 'MBI04_g42241_MAGBIO' => 'mbi', 'MBI05_g11988_MAGBIO' => 'mbi', 'MBI05_g35452_MAGBIO' => 'mbi', 'MBI07_g30179_MAGBIO' => 'mbi', 'MBI07_g35859_MAGBIO' => 'mbi', 'MBI07_g35860_MAGBIO' => 'mbi', 'MBI07_g37166_MAGBIO' => 'mbi', 'MBI08_g18172_MAGBIO' => 'mbi', 'MBI09_g08441_MAGBIO' => 'mbi', 'MBI13_g01676_MAGBIO' => 'mbi', 'MBI14_g42955_MAGBIO' => 'mbi', 'MBI16_g13161_MAGBIO' => 'mbi', 'MBI17_g27204_MAGBIO' => 'mbi', 'MBI19_g21595_MAGBIO' => 'mbi', 'MD00G1148400' => 'mdo', 'MD02G1301200' => 'mdo', 'MD03G1227800' => 'mdo', 'MD05G1041100' => 'mdo', 'MD05G1124800' => 'mdo', 'MD05G1284000' => 'mdo', 'MD05G1338800' => 'mdo', 'MD05G1338900' => 'mdo', 'MD07G1022800' => 'mdo', 'MD10G1047500' => 'mdo', 'MD10G1127500' => 'mdo', 'MD10G1262300' => 'mdo', 'MD10G1293800' => 'mdo', 'MD16G1074300' => 'mdo', 'Medtr1g021670' => 'mtr', 'Medtr1g096320' => 'mtr', 'Medtr2g013690' => 'mtr', 'Medtr2g019450' => 'mtr', 'Medtr2g085170' => 'mtr', 'Medtr4g088785' => 'mtr', 'Medtr8g055930' => 'mtr', 'Medtr8g085850' => 'mtr', 'MELO3C002605.2' => 'cme', 'MELO3C003891.2' => 'cme', 'MELO3C004012.2' => 'cme', 'MELO3C007134.2' => 'cme', 'MELO3C008118.2' => 'cme', 'MELO3C016700.2' => 'cme', 'MELO3C024127.2' => 'cme', 'MELO3C033361.2' => 'cme', 'MELO3C033362.2' => 'cme', 'Migut.C00430' => 'egut', 'Migut.C01246' => 'egut', 'Migut.E00101' => 'egut', 'Migut.H01486' => 'egut', 'Migut.H01939' => 'egut', 'Migut.K00360' => 'egut', 'Migut.M00910' => 'egut', 'Migut.M01139' => 'egut', 'Migut.N02677' => 'egut', 'MSTRG.13252' => 'ama', 'MSTRG.14701' => 'ama', 'MSTRG.1521' => 'ama', 'MSTRG.15884' => 'ama', 'MSTRG.16242' => 'ama', 'MSTRG.22285' => 'ama', 'MSTRG.22444' => 'ama', 'MSTRG.2349' => 'ama', 'MSTRG.26308' => 'ama', 'MSTRG.28296' => 'ama', 'MSTRG.9895' => 'ama', 'Nitab4.5_0000110g0060' => 'nta', 'Nitab4.5_0000420g0130' => 'nta', 'Nitab4.5_0000422g0030' => 'nta', 'Nitab4.5_0000560g0180' => 'nta', 'Nitab4.5_0000703g0100' => 'nta', 'Nitab4.5_0000786g0200' => 'nta', 'Nitab4.5_0001336g0020' => 'nta', 'Nitab4.5_0001796g0030' => 'nta', 'Nitab4.5_0003348g0060' => 'nta', 'Nitab4.5_0003698g0040' => 'nta', 'Nitab4.5_0003942g0090' => 'nta', 'Nitab4.5_0004775g0070' => 'nta', 'Nitab4.5_0004864g0030' => 'nta', 'Nitab4.5_0005615g0020' => 'nta', 'Nitab4.5_0009288g0030' => 'nta', 'Nitab4.5_0009341g0010' => 'nta', 'Nitab4.5_0009535g0010' => 'nta', 'Nn1g03995' => 'nnu', 'Nn1g04100' => 'nnu', 'Nn1g06530' => 'nnu', 'Nn3g16404' => 'nnu', 'Nn3g17212' => 'nnu', 'Nn3g20776' => 'nnu', 'Nn3g21923' => 'nnu', 'Nn5g27737' => 'nnu', 'Nn5g29461' => 'nnu', 'Nn7g38355' => 'nnu', 'Nn8g39873' => 'nnu', 'Oeu000548.2' => 'oeu', 'Oeu004672.1' => 'oeu', 'Oeu015605.2' => 'oeu', 'Oeu016092.1' => 'oeu', 'Oeu017879.3' => 'oeu', 'Oeu024910.1' => 'oeu', 'Oeu028965.1' => 'oeu', 'Oeu031269.1' => 'oeu', 'Oeu031270.1' => 'oeu', 'Oeu032535.1' => 'oeu', 'Oeu034151.1' => 'oeu', 'Oeu034152.1' => 'oeu', 'Oeu034588.2' => 'oeu', 'Oeu050846.1' => 'oeu', 'Oeu050849.2' => 'oeu', 'Oeu051063.2' => 'oeu', 'Oeu052368.1' => 'oeu', 'Oeu052370.1' => 'oeu', 'Os01g0210400' => 'osa', 'Os01g0304300' => 'osa', 'Os01g0749100' => 'osa', 'Os02g0745800' => 'osa', 'Os03g0769050' => 'osa', 'Os05g0531500' => 'osa', 'Os06g0724300' => 'osa', 'Os11g0198100' => 'osa', 'Peaxi162Scf00069g01425' => 'pax', 'Peaxi162Scf00280g00811' => 'pax', 'Peaxi162Scf00310g00615' => 'pax', 'Peaxi162Scf00362g00542' => 'pax', 'Peaxi162Scf00461g00310' => 'pax', 'Peaxi162Scf00530g00118' => 'pax', 'Peaxi162Scf00541g00057' => 'pax', 'Peaxi162Scf00661g00017' => 'pax', 'Peaxi162Scf00926g00027' => 'pax', 'Peaxi162Scf01064g00263' => 'pax', 'Peaxi162Scf01211g00135' => 'pax', 'PGR004G2336' => 'pgr', 'PGR042G0327' => 'pgr', 'PGR042G1957' => 'pgr', 'PGR042G2003' => 'pgr', 'PGR042G3929' => 'pgr', 'PGR083G1137' => 'pgr', 'PGR083G1364' => 'pgr', 'PGSC0003DMG400003381' => 'stu', 'PGSC0003DMG400003417' => 'stu', 'PGSC0003DMG400008981' => 'stu', 'PGSC0003DMG400012417' => 'stu', 'PGSC0003DMG400012823' => 'stu', 'PGSC0003DMG400016885' => 'stu', 'PGSC0003DMG400022812' => 'stu', 'PGSC0003DMG400029726' => 'stu', 'PGSC0003DMG401009243' => 'stu', 'PGSC0003DMG401031505' => 'stu', 'PGSC0003DMG402031505' => 'stu', 'Phvul.001G017600' => 'pvu', 'Phvul.002G193500' => 'pvu', 'Phvul.002G228900' => 'pvu', 'Phvul.002G236800' => 'pvu', 'Phvul.003G049500' => 'pvu', 'Phvul.005G072000' => 'pvu', 'Phvul.006G164800' => 'pvu', 'Phvul.006G185100' => 'pvu', 'Phvul.007G090000' => 'pvu', 'Potri.001G399800' => 'ptr', 'Potri.002G149900' => 'ptr', 'Potri.004G044100' => 'ptr', 'Potri.004G177600' => 'ptr', 'Potri.009G138000' => 'ptr', 'Potri.010G094000' => 'ptr', 'Potri.011G053000' => 'ptr', 'Potri.011G119300' => 'ptr', 'Potri.013G113700' => 'ptr', 'Potri.018G107800' => 'ptr', 'Potri.019G084100' => 'ptr', 'Pp3c14_23720' => 'ppa', 'Pp3c16_6340' => 'ppa', 'Pp3c23_13420' => 'ppa', 'Pp3c24_2740' => 'ppa', 'Pp3c25_860' => 'ppa', 'Pp3c8_21750' => 'ppa', 'Prupe.1G273000' => 'ppe', 'Prupe.1G273700' => 'ppe', 'Prupe.1G274100' => 'ppe', 'Prupe.2G023300' => 'ppe', 'Prupe.4G048000' => 'ppe', 'Prupe.4G080400' => 'ppe', 'Prupe.4G181200' => 'ppe', 'Prupe.8G056900' => 'ppe', 'Prupe.8G168700' => 'ppe', 'Psat1g189080' => 'psa', 'Psat1g204760' => 'psa', 'Psat4g175560' => 'psa', 'Psat4g177720' => 'psa', 'Psat5g244240' => 'psa', 'Psat6g010720' => 'psa', 'Psat6g187200' => 'psa', 'Psat7g072040' => 'psa', 'PSO017G3501' => 'pso', 'PSO063G2148' => 'pso', 'PSO063G5608' => 'pso', 'PSO210G6392' => 'pso', 'PSO541G2319' => 'pso', 'PSO541G2836' => 'pso', 'PSO541G4012' => 'pso', 'PSO541G6253' => 'pso', 'PSO675G0580' => 'pso', 'PSO675G0856' => 'pso', 'PSO675G5635' => 'pso', 'PSO675G9157' => 'pso', 'PSO832G1660' => 'pso', 'PSO832G1969' => 'pso', 'QL02p007186' => 'qlo', 'QL02p033904' => 'qlo', 'QL03p064391' => 'qlo', 'QL05p040593' => 'qlo', 'QL05p058242' => 'qlo', 'QL08p021825' => 'qlo', 'QL11p004981' => 'qlo', 'RcHm_v2.0_Chr1g0318301' => 'rch', 'RcHm_v2.0_Chr4g0418501' => 'rch', 'RcHm_v2.0_Chr4g0439971' => 'rch', 'RcHm_v2.0_Chr5g0008541' => 'rch', 'RcHm_v2.0_Chr5g0014101' => 'rch', 'RcHm_v2.0_Chr5g0014131' => 'rch', 'RcHm_v2.0_Chr5g0033621' => 'rch', 'RcHm_v2.0_Chr6g0272041' => 'rch', 'RcHm_v2.0_Chr6g0278831' => 'rch', 'Rhsim02G0130400' => 'rsi', 'Rhsim02G0171100' => 'rsi', 'Rhsim05G0053000' => 'rsi', 'Rhsim05G0053100' => 'rsi', 'Rhsim06G0096500' => 'rsi', 'Rhsim06G0096600' => 'rsi', 'Rhsim06G0199100' => 'rsi', 'Rhsim12G0062300' => 'rsi', 'Rhsim12G0062800' => 'rsi', 'Sabra02G0118600' => 'sbr', 'Sabra04G0027300' => 'sbr', 'Sabra04G0119500' => 'sbr', 'Sabra08G0112500' => 'sbr', 'Sabra11G0036800' => 'sbr', 'Sabra11G0103800' => 'sbr', 'Sabra13G0096300' => 'sbr', 'Sabra16G0262300' => 'sbr', 'Sabra18G0091700' => 'sbr', 'Sabra19G0095400' => 'sbr', 'SalBow6G3080' => 'sbo', 'SalBow7G1157' => 'sbo', 'SalBow7G2123' => 'sbo', 'SalBow7G2285' => 'sbo', 'SalBow7G3537' => 'sbo', 'SalBow8G2947' => 'sbo', 'SalBow8G4463' => 'sbo', 'SalBow8G5466' => 'sbo', 'Sc01g0001750' => 'sci', 'Sc02g0006640' => 'sci', 'Sc02g0006670' => 'sci', 'Sc04g0008220' => 'sci', 'Sc05g0006190' => 'sci', 'Sc08g0002760' => 'sci', 'Sc17g0006170' => 'sci', 'Sc22g0002050' => 'sci', 'Sc23g0001190' => 'sci', 'Sc24g0000980' => 'sci', 'Sed0006245' => 'sed', 'Sed0007543' => 'sed', 'Sed0009411' => 'sed', 'Sed0010765' => 'sed', 'Sed0012944' => 'sed', 'Sed0014682' => 'sed', 'Sed0016174' => 'sed', 'Sed0016796' => 'sed', 'Sed0020317' => 'sed', 'Sed0021467' => 'sed', 'SEGI_01316' => 'sgi', 'SEGI_03374' => 'sgi', 'SEGI_16265' => 'sgi', 'SEGI_18569' => 'sgi', 'SEGI_20351' => 'sgi', 'SEGI_26395' => 'sgi', 'SEGI_29469' => 'sgi', 'SEGI_34771' => 'sgi', 'SEGI_36769' => 'sgi', 'SEGI_37139' => 'sgi', 'SGA_v2.0_scaffold100G29687' => 'sas', 'SGA_v2.0_scaffold118G32472' => 'sas', 'SGA_v2.0_scaffold14G07051' => 'sas', 'SGA_v2.0_scaffold183G39845' => 'sas', 'SGA_v2.0_scaffold1G00174' => 'sas', 'SGA_v2.0_scaffold22G09714' => 'sas', 'SGA_v2.0_scaffold333G48992' => 'sas', 'SGA_v2.0_scaffold46G17491' => 'sas', 'SGA_v2.0_scaffold49G18294' => 'sas', 'SGA_v2.0_scaffold63G21658' => 'sas', 'SHI01741' => 'shi', 'SHI05771' => 'shi', 'SHI18077' => 'shi', 'SHI20525' => 'shi', 'SHI20527' => 'shi', 'SHI20528' => 'shi', 'SMO172G0185' => 'smo', 'SMO198G0020' => 'smo', 'SMO351G0006' => 'smo', 'SMO356G0118' => 'smo', 'SMO358G0296' => 'smo', 'SMO367G0079' => 'smo', 'SMO367G1277' => 'smo', 'Solyc01g014220.3' => 'sly', 'Solyc01g111770.2' => 'sly', 'Solyc02g078180.3' => 'sly', 'Solyc03g006430.3' => 'sly', 'Solyc03g006456.1' => 'sly', 'Solyc03g079860.2' => 'sly', 'Solyc04g079770.3' => 'sly', 'Solyc05g007430.4' => 'sly', 'Solyc07g063150.3' => 'sly', 'Solyc08g016620.3' => 'sly', 'Solyc09g057590.3' => 'sly', 'Solyc09g057600.1' => 'sly', 'Solyc10g009050.3' => 'sly', 'Solyc11g017420.2' => 'sly', 'Sopen01g053810' => 'spe', 'Sopen02g023040' => 'spe', 'Sopen03g002440' => 'spe', 'Sopen04g033350' => 'spe', 'Sopen05g003310' => 'spe', 'Sopen07g004050' => 'spe', 'Sopen07g031340' => 'spe', 'Sopen08g006990' => 'spe', 'Sopen10g004830' => 'spe', 'Sopen11g009370' => 'spe', 'Sp1g24450' => 'spa', 'Sp1g29670' => 'spa', 'Sp1g39600' => 'spa', 'Sp2g11080' => 'spa', 'Sp2g13970' => 'spa', 'Sp4g16130' => 'spa', 'Sp6g13080' => 'spa', 'Sp7g37270' => 'spa', 'TAR371G0065' => 'tar', 'TAR376G0340' => 'tar', 'TAR376G0435' => 'tar', 'TAR381G0002' => 'tar', 'TAR381G1236' => 'tar', 'TAR624G0055' => 'tar', 'TAR624G0324' => 'tar', 'TAR624G0696' => 'tar', 'TAR624G0906' => 'tar', 'TAR625G0107' => 'tar', 'TAR626G0015' => 'tar', 'TAR626G1356' => 'tar', 'TAR627G0888' => 'tar', 'TAR628G0399' => 'tar', 'TAR628G1327' => 'tar', 'TAR629G2831' => 'tar', 'TAR629G2874' => 'tar', 'TAR633G1432' => 'tar', 'TAR633G2771' => 'tar', 'THA.LOC104803394' => 'tha', 'THA.LOC104805153' => 'tha', 'THA.LOC104806784' => 'tha', 'THA.LOC104810473' => 'tha', 'THA.LOC104813100' => 'tha', 'THA.LOC104814215' => 'tha', 'THA.LOC104815554' => 'tha', 'THA.LOC104820544' => 'tha', 'THA.LOC104824754' => 'tha', 'THA.LOC104827717' => 'tha', 'Thecc.02G031400' => 'tca', 'Thecc.02G055900' => 'tca', 'Thecc.02G350800' => 'tca', 'Thecc.06G150900' => 'tca', 'Thecc.06G186600' => 'tca', 'Thecc.07G089600' => 'tca', 'Thecc.08G020400' => 'tca', 'Thecc.08G182100' => 'tca', 'Thhalv10000873m.g' => 'esa', 'Thhalv10004185m.g' => 'esa', 'Thhalv10006981m.g' => 'esa', 'Thhalv10007204m.g' => 'esa', 'Thhalv10011374m.g' => 'esa', 'Thhalv10013482m.g' => 'esa', 'Thhalv10017801m.g' => 'esa', 'Thhalv10024983m.g' => 'esa', 'TPR.G12072' => 'tpr', 'TPR.G15769' => 'tpr', 'TPR.G16504' => 'tpr', 'TPR.G16506' => 'tpr', 'TPR.G24345' => 'tpr', 'TPR.G26666' => 'tpr', 'TPR.G27320' => 'tpr', 'TPR.G31819' => 'tpr', 'TPR.G38879' => 'tpr', 'TPR.G39015' => 'tpr', 'TPR.G8819' => 'tpr', 'TWI09G0924' => 'twi', 'TWI12G0811' => 'twi', 'TWI12G1294' => 'twi', 'TWI31G0150' => 'twi', 'TWI36G1262' => 'twi', 'TWI38G1287' => 'twi', 'TWI38G1633' => 'twi', 'TWI38G1982' => 'twi', 'TWI39G0116' => 'twi', 'TWI60G1011' => 'twi', 'TWI63G0171' => 'twi', 'TWI73G0839' => 'twi', 'TWI79G1511' => 'twi', 'unitig_0.g915' => 'ugi', 'unitig_0.g916' => 'ugi', 'unitig_21.g20219' => 'ugi', 'unitig_21.g20416' => 'ugi', 'unitig_578.g16132' => 'ugi', 'unitig_578.g16718' => 'ugi', 'unitig_62.g23481' => 'ugi', 'unitig_744.g24535' => 'ugi', 'unitig_749.g13525' => 'ugi', 'vmacro01248' => 'vma', 'vmacro02290' => 'vma', 'vmacro10946' => 'vma', 'vmacro11865' => 'vma', 'vmacro12493' => 'vma', 'vmacro17322' => 'vma', 'vmacro21599' => 'vma', 'vmacro23041' => 'vma', 'VMungo0251G0004' => 'vmu', 'VMungo0251G2639' => 'vmu', 'VMungo0251G2967' => 'vmu', 'VMungo0540G0864' => 'vmu', 'VMungo0540G1569' => 'vmu', 'VMungo0647G0317' => 'vmu', 'VMungo0720G1373' => 'vmu', 'VMungo0720G1508' => 'vmu', 'VMungo1080G0485' => 'vmu', 'VMungo1215G3177' => 'vmu', 'Zm00001eb112600' => 'zma', 'Zm00001eb120220' => 'zma', 'Zm00001eb153240' => 'zma', 'Zm00001eb168880' => 'zma', 'Zm00001eb213920' => 'zma', 'Zm00001eb228280' => 'zma', 'Zm00001eb254580' => 'zma', 'Zm00001eb272180' => 'zma', 'Zm00001eb293190' => 'zma', 'Zm00001eb322930' => 'zma', 'Zm00001eb353360' => 'zma', 'Zm00001eb353390' => 'zma', 'Zm00001eb353430' => 'zma', 'Zm00001eb353440' => 'zma', 'Zm00001eb353780' => 'zma' ) $gf_id = 'HOM05D000499' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000499' ) $data_identifier = 'HOM05D000499' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 29, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 12, 'amhyb' => (int) 8, 'aly' => (int) 12, 'aox' => (int) 9, 'arhy' => (int) 26, 'ath' => (int) 8, 'atr' => (int) 7, 'acertr' => (int) 10, 'cqu' => (int) 15, 'bca' => (int) 29, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 11, 'cansat' => (int) 8, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 9, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 8, 'cpa' => (int) 10, 'csa' => (int) 7, 'camsi' => (int) 20, 'dca' => (int) 8, 'din' => (int) 12, 'dzi' => (int) 14, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 6, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 38, 'gra' => (int) 16, 'vvi' => (int) 8, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 5, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 11, 'lja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 11, 'mpo' => (int) 3, 'mbi' => (int) 14, 'mdo' => (int) 14, 'mtr' => (int) 8, 'cme' => (int) 9, 'egut' => (int) 9, 'ama' => (int) 11, 'nta' => (int) 17, 'nnu' => (int) 11, 'oeu' => (int) 18, 'osa' => (int) 8, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 6, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 9, 'rsi' => (int) 9, 'sbr' => (int) 10, 'sbo' => (int) 8, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 10, 'sas' => (int) 10, 'shi' => (int) 6, 'smo' => (int) 7, 'sly' => (int) 14, 'spe' => (int) 10, 'spa' => (int) 8, 'tar' => (int) 19, 'tha' => (int) 10, 'tca' => (int) 8, 'esa' => (int) 8, 'tpr' => (int) 11, 'twi' => (int) 13, 'ugi' => (int) 9, 'vma' => (int) 8, 'vmu' => (int) 10, 'zma' => (int) 15 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb353780' $species_info = array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ) $local_species = 'sbr' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000499', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1066', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p29780' => 'bna', 'A02p33180' => 'bna', 'A03p16470' => 'bna', 'A03p66010' => 'bna', 'A04p25970' => 'bna', 'A06p01270' => 'bna', 'A06p46080' => 'bna', 'A07p11400' => 'bna', 'A08p01840' => 'bna', 'A08p08230' => 'bna', 'A08p25740' => 'bna', 'A09p32070' => 'bna', 'A09p37830' => 'bna', 'A09p42840' => 'bna', 'A09p42850' => 'bna', 'Aa31LG10G2060' => 'aar', 'Aa31LG2G7410' => 'aar', 'Aa31LG6G10200' => 'aar', 'Aa31LG6G16680' => 'aar', 'Aa31LG6G8470' => 'aar', 'Aa31LG9G12730' => 'aar', 'Aa31LG9G13680' => 'aar', 'Aa31LG9G14920' => 'aar', 'Aa31LG9G6650' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4977' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5467' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3254' => 'aag', 'Actinidia02578' => 'ach', 'Actinidia07693' => 'ach', 'Actinidia08413' => 'ach', 'Actinidia08414' => 'ach', 'Actinidia15289' => 'ach', 'Actinidia19871' => 'ach', 'Actinidia21475' => 'ach', 'Actinidia22576' => 'ach', 'Actinidia28327' => 'ach', 'Actinidia32491' => 'ach', 'Actinidia39463' => 'ach', 'Actinidia39571' => 'ach', 'Ah.01g013750' => 'amhyb', 'Ah.01g023210' => 'amhyb', 'Ah.04g164850' => 'amhyb', 'Ah.05g178060' => 'amhyb', 'Ah.07g204270' => 'amhyb', 'Ah.07g208480' => 'amhyb', 'Ah.09g237410' => 'amhyb', 'Ah.14g089460' => 'amhyb', 'AL1G41790' => 'aly', 'AL1G49050' => 'aly', 'AL1G53810' => 'aly', 'AL1G61400' => 'aly', 'AL4G18580' => 'aly', 'AL5G12510' => 'aly', 'AL5G12540' => 'aly', 'AL6G43230' => 'aly', 'AL7G10370' => 'aly', 'AL7G19250' => 'aly', 'AL8G12240' => 'aly', 'AL8G18540' => 'aly', 'Aqoxy1G02409' => 'aox', 'Aqoxy2G03993' => 'aox', 'Aqoxy3G03357' => 'aox', 'Aqoxy4G00785' => 'aox', 'Aqoxy5G02598' => 'aox', 'Aqoxy6G00132' => 'aox', 'Aqoxy7G01776' => 'aox', 'Aqoxy7G02316' => 'aox', 'Aqoxy7G03973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.12AFKW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B8730' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27IQR1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3F75VG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3RE0GA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41TCQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.527VTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FIR39' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5W8UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DA38EV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ63HS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H1I32C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HC27T5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4M8AP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7N3CZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9UVDZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LS1NQA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT1D4B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SKC4TM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCFV76' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF9Q1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQWD9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1ZM88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WE07RT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YCK7VH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJE6Q6' => 'arhy', 'AT1G28240' => 'ath', 'AT1G34550' => 'ath', 'AT1G53040' => 'ath', 'AT2G02910' => 'ath', 'AT4G09630' => 'ath', 'AT4G38500' => 'ath', 'AT5G42660' => 'ath', 'AT5G46220' => 'ath', 'ATR0152G026' => 'atr', 'ATR0564G343' => 'atr', 'ATR0706G151' => 'atr', 'ATR0733G207' => 'atr', 'ATR0751G234' => 'atr', 'ATR0807G048' => 'atr', 'ATR1091G084' => 'atr', 'Atru.chr10.1229' => 'acertr', 'Atru.chr10.1230' => 'acertr', 'Atru.chr10.1874' => 'acertr', 'Atru.chr11.1808' => 'acertr', 'Atru.chr13.1795' => 'acertr', 'Atru.chr13.570' => 'acertr', 'Atru.chr2.2608' => 'acertr', 'Atru.chr2.2609' => 'acertr', 'Atru.chr5.3428' => 'acertr', 'Atru.chr8.1171' => 'acertr', 'AUR62004651' => 'cqu', 'AUR62008675' => 'cqu', 'AUR62010014' => 'cqu', 'AUR62013004' => 'cqu', 'AUR62014825' => 'cqu', 'AUR62015015' => 'cqu', 'AUR62015151' => 'cqu', 'AUR62017020' => 'cqu', 'AUR62019422' => 'cqu', 'AUR62023570' => 'cqu', 'AUR62025571' => 'cqu', 'AUR62029098' => 'cqu', 'AUR62033863' => 'cqu', 'AUR62034296' => 'cqu', 'AUR62040075' => 'cqu', 'BcaB02g07334' => 'bca', 'BcaB02g10575' => 'bca', 'BcaB03g12119' => 'bca', 'BcaB03g12120' => 'bca', 'BcaB03g13945' => 'bca', 'BcaB04g17123' => 'bca', 'BcaB04g17867' => 'bca', 'BcaB04g19839' => 'bca', 'BcaB07g30317' => 'bca', 'BcaB07g32432' => 'bca', 'BcaB07g33362' => 'bca', 'BcaB08g36611' => 'bca', 'BcaC01g00028' => 'bca', 'BcaC01g01356' => 'bca', 'BcaC01g02034' => 'bca', 'BcaC01g06051' => 'bca', 'BcaC03g16839' => 'bca', 'BcaC03g17176' => 'bca', 'BcaC05g26829' => 'bca', 'BcaC06g31490' => 'bca', 'BcaC06g35344' => 'bca', 'BcaC06g36570' => 'bca', 'BcaC07g37537' => 'bca', 'BcaC08g43491' => 'bca', 'BcaC08g43773' => 'bca', 'BcaNung00234' => 'bca', 'BcaNung01982' => 'bca', 'BcaNung03707' => 'bca', 'BcaNung06454' => 'bca', 'BolC2t10762H' => 'bol', 'BolC2t11191H' => 'bol', 'BolC3t14322H' => 'bol', 'BolC3t19747H' => 'bol', 'BolC3t21425H' => 'bol', 'BolC4t27800H' => 'bol', 'BolC5t31423H' => 'bol', 'BolC6t35951H' => 'bol', 'BolC6t36282H' => 'bol', 'BolC7t40678H' => 'bol', 'BolC7t40679H' => 'bol', 'BolC7t42222H' => 'bol', 'BolC7t43492H' => 'bol', 'BolC7t46785H' => 'bol', 'BolC8t47853H' => 'bol', 'BolC9t56805H' => 'bol', 'BraA02t08000Z' => 'bra', 'BraA02t08341Z' => 'bra', 'BraA03t10936Z' => 'bra', 'BraA03t15657Z' => 'bra', 'BraA04t18100Z' => 'bra', 'BraA05t20523Z' => 'bra', 'BraA06t23353Z' => 'bra', 'BraA06t27473Z' => 'bra', 'BraA06t27769Z' => 'bra', 'BraA07t28928Z' => 'bra', 'BraA08t32236Z' => 'bra', 'BraA08t32841Z' => 'bra', 'BraA08t34524Z' => 'bra', 'BraA09t38742Z' => 'bra', 'BraA09t39295Z' => 'bra', 'C02p47180' => 'bna', 'C02p50990' => 'bna', 'C03p19360' => 'bna', 'C03p74950' => 'bna', 'C03p91000' => 'bna', 'C04p63260' => 'bna', 'C05p27050' => 'bna', 'C06p08750' => 'bna', 'C06p11490' => 'bna', 'C07p02820' => 'bna', 'C07p17180' => 'bna', 'C07p29440' => 'bna', 'C07p63730' => 'bna', 'C09p39260' => 'bna', 'CAN.G1164.34' => 'can', 'CAN.G1164.39' => 'can', 'CAN.G1530.3' => 'can', 'CAN.G162.61' => 'can', 'CAN.G176.6' => 'can', 'CAN.G289.49' => 'can', 'CAN.G370.21' => 'can', 'CAN.G370.22' => 'can', 'CAN.G371.117' => 'can', 'CAN.G58.37' => 'can', 'CAN.G588.98' => 'can', 'CANSAT21G2266' => 'cansat', 'CANSAT25G2799' => 'cansat', 'CANSAT35G0862' => 'cansat', 'CANSAT35G1704' => 'cansat', 'CANSAT35G1760' => 'cansat', 'CANSAT56G3971' => 'cansat', 'CANSAT56G4116' => 'cansat', 'CANSAT80G1259' => 'cansat', 'CARHR027730' => 'chi', 'CARHR033880' => 'chi', 'CARHR043270' => 'chi', 'CARHR145330' => 'chi', 'CARHR145340' => 'chi', 'CARHR175570' => 'chi', 'CARHR181570' => 'chi', 'CARHR258470' => 'chi', 'CARHR260490' => 'chi', 'CARHR294220' => 'chi', 'Carub.0001s2668' => 'cru', 'Carub.0001s3257' => 'cru', 'Carub.0001s4220' => 'cru', 'Carub.0005s0179' => 'cru', 'Carub.0006s2807' => 'cru', 'Carub.0007s0039' => 'cru', 'Carub.0008s0169' => 'cru', 'Carub.0008s0636' => 'cru', 'Ca_00338_v3' => 'car', 'Ca_00542_v3' => 'car', 'Ca_01844_v3' => 'car', 'Ca_10611_v3' => 'car', 'Ca_13326_v3' => 'car', 'Ca_17944_v3' => 'car', 'Ca_18546_v3' => 'car', 'Ca_24219_v3' => 'car', 'Ca_29972_v3' => 'car', 'CBR_g3681' => 'cbr', 'CBR_g40021' => 'cbr', 'Cc01_g08140' => 'ccan', 'Cc02_g13410' => 'ccan', 'Cc02_g37480' => 'ccan', 'Cc05_g12030' => 'ccan', 'Cc09_g03370' => 'ccan', 'Cc09_g10300' => 'ccan', 'Cc10_g03530' => 'ccan', 'Cc10_g11380' => 'ccan', 'CDE01G0176' => 'cde', 'CDE02G0675' => 'cde', 'CDE02G0942' => 'cde', 'CDE02G1153' => 'cde', 'CDE02G4177' => 'cde', 'CDE04G2117' => 'cde', 'CDE04G2736' => 'cde', 'CDE08G1161' => 'cde', 'CDE09G1238' => 'cde', 'Cfa000467' => 'cfa', 'Cfa000947' => 'cfa', 'Cfa004969' => 'cfa', 'Cfa005284' => 'cfa', 'Cfa008993' => 'cfa', 'Cfa018187' => 'cfa', 'Cfa018454' => 'cfa', 'Cfa020585' => 'cfa', 'Ciclev10000424m.g' => 'ccl', 'Ciclev10003605m.g' => 'ccl', 'Ciclev10007828m.g' => 'ccl', 'Ciclev10014620m.g' => 'ccl', 'Ciclev10015169m.g' => 'ccl', 'Ciclev10018291m.g' => 'ccl', 'Ciclev10028256m.g' => 'ccl', 'Ciclev10033822m.g' => 'ccl', 'CiPaw.05G060300' => 'cil', 'CiPaw.05G085000' => 'cil', 'CiPaw.06G083700' => 'cil', 'CiPaw.06G120300' => 'cil', 'CiPaw.09G060500' => 'cil', 'CiPaw.09G123800' => 'cil', 'CiPaw.11G169700' => 'cil', 'CiPaw.12G118300' => 'cil', 'CiPaw.15G071000' => 'cil', 'CiPaw.15G081900' => 'cil', 'ClCG01G024610' => 'cla', 'ClCG03G006070' => 'cla', 'ClCG05G019250' => 'cla', 'ClCG09G009500' => 'cla', 'ClCG11G008200' => 'cla', 'ClCG11G018080' => 'cla', 'COL.COLO4_17373' => 'col', 'COL.COLO4_22994' => 'col', 'COL.COLO4_26389' => 'col', 'COL.COLO4_27170' => 'col', 'COL.COLO4_31074' => 'col', 'COL.COLO4_31465' => 'col', 'COL.COLO4_36438' => 'col', 'COL.COLO4_36439' => 'col', 'Cpa.g.c38781' => 'cpa', 'Cpa.g.sc128.12' => 'cpa', 'Cpa.g.sc166.7' => 'cpa', 'Cpa.g.sc166.8' => 'cpa', 'Cpa.g.sc20.111' => 'cpa', 'Cpa.g.sc27.31' => 'cpa', 'Cpa.g.sc64.36' => 'cpa', 'Cpa.g.sc64.37' => 'cpa', 'Cpa.g.sc66.49' => 'cpa', 'Cpa.g.sc80.64' => 'cpa', 'CsaV3_1G012320' => 'csa', 'CsaV3_2G008480' => 'csa', 'CsaV3_2G033450' => 'csa', 'CsaV3_3G044830' => 'csa', 'CsaV3_4G033710' => 'csa', 'CsaV3_6G051730' => 'csa', 'CsaV3_7G025350' => 'csa', 'CSS0001067' => 'camsi', 'CSS0005996' => 'camsi', 'CSS0006590' => 'camsi', 'CSS0009673' => 'camsi', 'CSS0010201' => 'camsi', 'CSS0010549' => 'camsi', 'CSS0011364' => 'camsi', 'CSS0014473' => 'camsi', 'CSS0014961' => 'camsi', 'CSS0020191' => 'camsi', 'CSS0021165' => 'camsi', 'CSS0022306' => 'camsi', 'CSS0030591' => 'camsi', 'CSS0030696' => 'camsi', 'CSS0032653' => 'camsi', 'CSS0037487' => 'camsi', 'CSS0041102' => 'camsi', 'CSS0041261' => 'camsi', 'CSS0046246' => 'camsi', 'CSS0049256' => 'camsi', 'DCAR_004075' => 'dca', 'DCAR_011538' => 'dca', 'DCAR_019553' => 'dca', 'DCAR_020952' => 'dca', 'DCAR_021739' => 'dca', 'DCAR_027407' => 'dca', 'DCAR_027913' => 'dca', 'DCAR_028066' => 'dca', 'Dinv05899' => 'din', 'Dinv07563' => 'din', 'Dinv08010' => 'din', 'Dinv14125' => 'din', 'Dinv20172' => 'din', 'Dinv30743' => 'din', 'Dinv31229' => 'din', 'Dinv34162' => 'din', 'Dinv36028' => 'din', 'Dinv39368' => 'din', 'Dinv40565' => 'din', 'Dinv41706' => 'din', 'Duzib052G0089' => 'dzi', 'Duzib116G0641' => 'dzi', 'Duzib132G0069' => 'dzi', 'Duzib132G1219' => 'dzi', 'Duzib147G0278' => 'dzi', 'Duzib160G0480' => 'dzi', 'Duzib170G0661' => 'dzi', 'Duzib177G0591' => 'dzi', 'Duzib187G1353' => 'dzi', 'Duzib192G0858' => 'dzi', 'Duzib192G0883' => 'dzi', 'Duzib213G0506' => 'dzi', 'Duzib235G0289' => 'dzi', 'Duzib251G0422' => 'dzi', 'ECA232G3898' => 'eca', 'ECA233G5950' => 'eca', 'ECA234G1699' => 'eca', 'ECA234G2421' => 'eca', 'ECA236G0426' => 'eca', 'ECA236G4331' => 'eca', 'ECA248G2573' => 'eca', 'EL10Ac1g00077' => 'bvu', 'EL10Ac1g01746' => 'bvu', 'EL10Ac2g03464' => 'bvu', 'EL10Ac4g08176' => 'bvu', 'EL10Ac7g17521' => 'bvu', 'EL10Ac8g20386' => 'bvu', 'EL10Ac9g21343' => 'bvu', 'EL10Ac9g22688' => 'bvu', 'Eucgr.B03434' => 'egr', 'Eucgr.D00618' => 'egr', 'Eucgr.E02395' => 'egr', 'Eucgr.F01129' => 'egr', 'Eucgr.F02622' => 'egr', 'Eucgr.F04207' => 'egr', 'FAN01G0570' => 'fan', 'FAN03G3351' => 'fan', 'FAN06G3702' => 'fan', 'FAN07G2149' => 'fan', 'FAN10G3758' => 'fan', 'FAN11G1170' => 'fan', 'FAN11G2050' => 'fan', 'FAN11G2724' => 'fan', 'FAN12G1700' => 'fan', 'FAN12G2028' => 'fan', 'FAN15G1160' => 'fan', 'FAN15G3063' => 'fan', 'FAN16G2540' => 'fan', 'FAN16G3077' => 'fan', 'FAN16G3624' => 'fan', 'FAN17G0221' => 'fan', 'FAN20G2492' => 'fan', 'FAN20G2905' => 'fan', 'FAN21G0548' => 'fan', 'FAN21G1300' => 'fan', 'FAN22G0077' => 'fan', 'FAN22G1315' => 'fan', 'FAN24G1280' => 'fan', 'FAN24G1445' => 'fan', 'FAN24G3527' => 'fan', 'FAN25G0464' => 'fan', 'FAN25G2885' => 'fan', 'FAN25G3270' => 'fan', 'FAN27G1101' => 'fan', 'FAN27G2846' => 'fan', 'FAN27G3524' => 'fan', 'FvH4_2g11770' => 'fve', 'FvH4_2g15630' => 'fve', 'FvH4_3g05570' => 'fve', 'FvH4_3g09110' => 'fve', 'FvH4_3g19940' => 'fve', 'FvH4_4g04821' => 'fve', 'FvH4_4g31480' => 'fve', 'FvH4_7g01740' => 'fve', 'Glyma.05G130400' => 'gma', 'Glyma.05G156400' => 'gma', 'Glyma.07G197000' => 'gma', 'Glyma.08G085151' => 'gma', 'Glyma.08G114500' => 'gma', 'Glyma.08G300400' => 'gma', 'Glyma.10G215800' => 'gma', 'Glyma.12G224400' => 'gma', 'Glyma.13G179300' => 'gma', 'Glyma.13G218151' => 'gma', 'Glyma.13G238800' => 'gma', 'Glyma.13G276900' => 'gma', 'Glyma.14G078200' => 'gma', 'Glyma.15G074500' => 'gma', 'Glyma.15G094100' => 'gma', 'Glyma.17G247200' => 'gma', 'Glyma.18G120100' => 'gma', 'Glyma.20G176000' => 'gma', 'Gohir.A01G063600' => 'ghi', 'Gohir.A01G170301' => 'ghi', 'Gohir.A02G060500' => 'ghi', 'Gohir.A05G133850' => 'ghi', 'Gohir.A05G161400' => 'ghi', 'Gohir.A06G012900' => 'ghi', 'Gohir.A06G035901' => 'ghi', 'Gohir.A06G127100' => 'ghi', 'Gohir.A06G210500' => 'ghi', 'Gohir.A08G008650' => 'ghi', 'Gohir.A09G072700' => 'ghi', 'Gohir.A09G088301' => 'ghi', 'Gohir.A10G040600' => 'ghi', 'Gohir.A12G036300' => 'ghi', 'Gohir.A12G143350' => 'ghi', 'Gohir.A12G165500' => 'ghi', 'Gohir.A13G145700' => 'ghi', 'Gohir.D01G050000' => 'ghi', 'Gohir.D01G051366' => 'ghi', 'Gohir.D01G161350' => 'ghi', 'Gohir.D02G065900' => 'ghi', 'Gohir.D05G164200' => 'ghi', 'Gohir.D05G355500' => 'ghi', 'Gohir.D06G010400' => 'ghi', 'Gohir.D06G111250' => 'ghi', 'Gohir.D06G132000' => 'ghi', 'Gohir.D06G210500' => 'ghi', 'Gohir.D07G165675' => 'ghi', 'Gohir.D08G062240' => 'ghi', 'Gohir.D08G086101' => 'ghi', 'Gohir.D08G138060' => 'ghi', 'Gohir.D09G072300' => 'ghi', 'Gohir.D10G041400' => 'ghi', 'Gohir.D11G191020' => 'ghi', 'Gohir.D11G212066' => 'ghi', 'Gohir.D12G036300' => 'ghi', 'Gohir.D12G168600' => 'ghi', 'Gohir.D13G150600' => 'ghi', 'Gorai.001G057300' => 'gra', 'Gorai.002G069900' => 'gra', 'Gorai.002G200000' => 'gra', 'Gorai.003G067600' => 'gra', 'Gorai.005G074800' => 'gra', 'Gorai.006G087300' => 'gra', 'Gorai.008G037500' => 'gra', 'Gorai.008G181400' => 'gra', 'Gorai.009G169400' => 'gra', 'Gorai.009G387900' => 'gra', 'Gorai.010G013300' => 'gra', 'Gorai.010G153800' => 'gra', 'Gorai.010G255800' => 'gra', 'Gorai.011G043700' => 'gra', 'Gorai.011G198900' => 'gra', 'Gorai.013G168400' => 'gra', 'GSVIVG01005212001' => 'vvi', 'GSVIVG01006163001' => 'vvi', 'GSVIVG01009625001' => 'vvi', 'GSVIVG01014338001' => 'vvi', 'GSVIVG01020005001' => 'vvi', 'GSVIVG01021450001' => 'vvi', 'GSVIVG01023975001' => 'vvi', 'GSVIVG01034490001' => 'vvi', 'HanXRQChr04g0112071' => 'han', 'HanXRQChr05g0131151' => 'han', 'HanXRQChr09g0262371' => 'han', 'HanXRQChr09g0268401' => 'han', 'HanXRQChr10g0279241' => 'han', 'HanXRQChr10g0297961' => 'han', 'HanXRQChr11g0326231' => 'han', 'HanXRQChr11g0328471' => 'han', 'HanXRQChr16g0507941' => 'han', 'HanXRQChr17g0560211' => 'han', 'Haze_02108' => 'cav', 'Haze_02428' => 'cav', 'Haze_05593' => 'cav', 'Haze_06448' => 'cav', 'Haze_09427' => 'cav', 'Haze_12022' => 'cav', 'Haze_17612' => 'cav', 'Haze_17928' => 'cav', 'Hma1.2p1_0032F.1_g019250' => 'hma', 'Hma1.2p1_0163F.1_g072690' => 'hma', 'Hma1.2p1_0265F.1_g106710' => 'hma', 'Hma1.2p1_0286F.1_g113970' => 'hma', 'Hma1.2p1_0363F.1_g136640' => 'hma', 'Hma1.2p1_0584F.1_g183470' => 'hma', 'Hma1.2p1_0885F.1_g232570' => 'hma', 'HPP92_006022' => 'vpl', 'HPP92_007320' => 'vpl', 'HPP92_011521' => 'vpl', 'HPP92_019387' => 'vpl', 'HPP92_024038' => 'vpl', 'Hund05891' => 'sun', 'Hund06450' => 'sun', 'Hund12053' => 'sun', 'Hund16800' => 'sun', 'Hund21222' => 'sun', 'Hund22896' => 'sun', 'Hund23746' => 'sun', 'Hund27083' => 'sun', 'Lalb_Chr02g0141831' => 'lal', 'Lalb_Chr02g0141841' => 'lal', 'Lalb_Chr05g0220411' => 'lal', 'Lalb_Chr06g0162081' => 'lal', 'Lalb_Chr09g0327651' => 'lal', 'Lalb_Chr13g0295051' => 'lal', 'Lalb_Chr15g0086801' => 'lal', 'Lalb_Chr16g0383781' => 'lal', 'Lalb_Chr16g0383791' => 'lal', 'Lalb_Chr18g0055441' => 'lal', 'Lalb_Chr18g0059611' => 'lal', 'Lalb_Chr20g0109661' => 'lal', 'Lalb_Chr20g0109831' => 'lal', 'Lalb_Chr20g0121871' => 'lal', 'Lalb_Chr22g0355361' => 'lal', 'Lalb_Chr25g0286371' => 'lal', 'Lj1A1187G43' => 'lonja', 'Lj1A1205T50' => 'lonja', 'Lj1A800G33' => 'lonja', 'Lj1C1187T7' => 'lonja', 'Lj1C843T11' => 'lonja', 'Lj1g0010940' => 'lja', 'Lj2A288T69' => 'lonja', 'Lj3g0024276' => 'lja', 'Lj4A47T76' => 'lonja', 'Lj4g0005805' => 'lja', 'Lj4g0006097' => 'lja', 'Lj4g0008528' => 'lja', 'Lj4g0024907' => 'lja', 'Lj5g0012472' => 'lja', 'Lj5g0018648' => 'lja', 'Lj6C789G1' => 'lonja', 'Lj6g0004000' => 'lja', 'Lj7A292G67' => 'lonja', 'Lj7A292T64' => 'lonja', 'Lj9A400T58' => 'lonja', 'Lsat_1_v5_gn_1_126181' => 'lsa', 'Lsat_1_v5_gn_4_123041' => 'lsa', 'Lsat_1_v5_gn_4_133620' => 'lsa', 'Lsat_1_v5_gn_4_53221' => 'lsa', 'Lsat_1_v5_gn_4_71961' => 'lsa', 'Lsat_1_v5_gn_7_105241' => 'lsa', 'Lsat_1_v5_gn_7_21361' => 'lsa', 'Lsat_1_v5_gn_7_28860' => 'lsa', 'Lsat_1_v5_gn_7_31260' => 'lsa', 'Lsat_1_v5_gn_8_52801' => 'lsa', 'Manes.02G191400' => 'mes', 'Manes.03G110100' => 'mes', 'Manes.04G071100' => 'mes', 'Manes.05G100500' => 'mes', 'Manes.05G164700' => 'mes', 'Manes.15G087000' => 'mes', 'Manes.15G121500' => 'mes', 'Manes.16G028300' => 'mes', 'Manes.17G046100' => 'mes', 'Manes.17G069800' => 'mes', 'Manes.18G100500' => 'mes', 'Mapoly0002s0109' => 'mpo', 'Mapoly0024s0007' => 'mpo', 'Mapoly0089s0032' => 'mpo', 'MBI04_g42241_MAGBIO' => 'mbi', 'MBI05_g11988_MAGBIO' => 'mbi', 'MBI05_g35452_MAGBIO' => 'mbi', 'MBI07_g30179_MAGBIO' => 'mbi', 'MBI07_g35859_MAGBIO' => 'mbi', 'MBI07_g35860_MAGBIO' => 'mbi', 'MBI07_g37166_MAGBIO' => 'mbi', 'MBI08_g18172_MAGBIO' => 'mbi', 'MBI09_g08441_MAGBIO' => 'mbi', 'MBI13_g01676_MAGBIO' => 'mbi', 'MBI14_g42955_MAGBIO' => 'mbi', 'MBI16_g13161_MAGBIO' => 'mbi', 'MBI17_g27204_MAGBIO' => 'mbi', 'MBI19_g21595_MAGBIO' => 'mbi', 'MD00G1148400' => 'mdo', 'MD02G1301200' => 'mdo', 'MD03G1227800' => 'mdo', 'MD05G1041100' => 'mdo', 'MD05G1124800' => 'mdo', 'MD05G1284000' => 'mdo', 'MD05G1338800' => 'mdo', 'MD05G1338900' => 'mdo', 'MD07G1022800' => 'mdo', 'MD10G1047500' => 'mdo', 'MD10G1127500' => 'mdo', 'MD10G1262300' => 'mdo', 'MD10G1293800' => 'mdo', 'MD16G1074300' => 'mdo', 'Medtr1g021670' => 'mtr', 'Medtr1g096320' => 'mtr', 'Medtr2g013690' => 'mtr', 'Medtr2g019450' => 'mtr', 'Medtr2g085170' => 'mtr', 'Medtr4g088785' => 'mtr', 'Medtr8g055930' => 'mtr', 'Medtr8g085850' => 'mtr', 'MELO3C002605.2' => 'cme', 'MELO3C003891.2' => 'cme', 'MELO3C004012.2' => 'cme', 'MELO3C007134.2' => 'cme', 'MELO3C008118.2' => 'cme', 'MELO3C016700.2' => 'cme', 'MELO3C024127.2' => 'cme', 'MELO3C033361.2' => 'cme', 'MELO3C033362.2' => 'cme', 'Migut.C00430' => 'egut', 'Migut.C01246' => 'egut', 'Migut.E00101' => 'egut', 'Migut.H01486' => 'egut', 'Migut.H01939' => 'egut', 'Migut.K00360' => 'egut', 'Migut.M00910' => 'egut', 'Migut.M01139' => 'egut', 'Migut.N02677' => 'egut', 'MSTRG.13252' => 'ama', 'MSTRG.14701' => 'ama', 'MSTRG.1521' => 'ama', 'MSTRG.15884' => 'ama', 'MSTRG.16242' => 'ama', 'MSTRG.22285' => 'ama', 'MSTRG.22444' => 'ama', 'MSTRG.2349' => 'ama', 'MSTRG.26308' => 'ama', 'MSTRG.28296' => 'ama', 'MSTRG.9895' => 'ama', 'Nitab4.5_0000110g0060' => 'nta', 'Nitab4.5_0000420g0130' => 'nta', 'Nitab4.5_0000422g0030' => 'nta', 'Nitab4.5_0000560g0180' => 'nta', 'Nitab4.5_0000703g0100' => 'nta', 'Nitab4.5_0000786g0200' => 'nta', 'Nitab4.5_0001336g0020' => 'nta', 'Nitab4.5_0001796g0030' => 'nta', 'Nitab4.5_0003348g0060' => 'nta', 'Nitab4.5_0003698g0040' => 'nta', 'Nitab4.5_0003942g0090' => 'nta', 'Nitab4.5_0004775g0070' => 'nta', 'Nitab4.5_0004864g0030' => 'nta', 'Nitab4.5_0005615g0020' => 'nta', 'Nitab4.5_0009288g0030' => 'nta', 'Nitab4.5_0009341g0010' => 'nta', 'Nitab4.5_0009535g0010' => 'nta', 'Nn1g03995' => 'nnu', 'Nn1g04100' => 'nnu', 'Nn1g06530' => 'nnu', 'Nn3g16404' => 'nnu', 'Nn3g17212' => 'nnu', 'Nn3g20776' => 'nnu', 'Nn3g21923' => 'nnu', 'Nn5g27737' => 'nnu', 'Nn5g29461' => 'nnu', 'Nn7g38355' => 'nnu', 'Nn8g39873' => 'nnu', 'Oeu000548.2' => 'oeu', 'Oeu004672.1' => 'oeu', 'Oeu015605.2' => 'oeu', 'Oeu016092.1' => 'oeu', 'Oeu017879.3' => 'oeu', 'Oeu024910.1' => 'oeu', 'Oeu028965.1' => 'oeu', 'Oeu031269.1' => 'oeu', 'Oeu031270.1' => 'oeu', 'Oeu032535.1' => 'oeu', 'Oeu034151.1' => 'oeu', 'Oeu034152.1' => 'oeu', 'Oeu034588.2' => 'oeu', 'Oeu050846.1' => 'oeu', 'Oeu050849.2' => 'oeu', 'Oeu051063.2' => 'oeu', 'Oeu052368.1' => 'oeu', 'Oeu052370.1' => 'oeu', 'Os01g0210400' => 'osa', 'Os01g0304300' => 'osa', 'Os01g0749100' => 'osa', 'Os02g0745800' => 'osa', 'Os03g0769050' => 'osa', 'Os05g0531500' => 'osa', 'Os06g0724300' => 'osa', 'Os11g0198100' => 'osa', 'Peaxi162Scf00069g01425' => 'pax', 'Peaxi162Scf00280g00811' => 'pax', 'Peaxi162Scf00310g00615' => 'pax', 'Peaxi162Scf00362g00542' => 'pax', 'Peaxi162Scf00461g00310' => 'pax', 'Peaxi162Scf00530g00118' => 'pax', 'Peaxi162Scf00541g00057' => 'pax', 'Peaxi162Scf00661g00017' => 'pax', 'Peaxi162Scf00926g00027' => 'pax', 'Peaxi162Scf01064g00263' => 'pax', 'Peaxi162Scf01211g00135' => 'pax', 'PGR004G2336' => 'pgr', 'PGR042G0327' => 'pgr', 'PGR042G1957' => 'pgr', 'PGR042G2003' => 'pgr', 'PGR042G3929' => 'pgr', 'PGR083G1137' => 'pgr', 'PGR083G1364' => 'pgr', 'PGSC0003DMG400003381' => 'stu', 'PGSC0003DMG400003417' => 'stu', 'PGSC0003DMG400008981' => 'stu', 'PGSC0003DMG400012417' => 'stu', 'PGSC0003DMG400012823' => 'stu', 'PGSC0003DMG400016885' => 'stu', 'PGSC0003DMG400022812' => 'stu', 'PGSC0003DMG400029726' => 'stu', 'PGSC0003DMG401009243' => 'stu', 'PGSC0003DMG401031505' => 'stu', 'PGSC0003DMG402031505' => 'stu', 'Phvul.001G017600' => 'pvu', 'Phvul.002G193500' => 'pvu', 'Phvul.002G228900' => 'pvu', 'Phvul.002G236800' => 'pvu', 'Phvul.003G049500' => 'pvu', 'Phvul.005G072000' => 'pvu', 'Phvul.006G164800' => 'pvu', 'Phvul.006G185100' => 'pvu', 'Phvul.007G090000' => 'pvu', 'Potri.001G399800' => 'ptr', 'Potri.002G149900' => 'ptr', 'Potri.004G044100' => 'ptr', 'Potri.004G177600' => 'ptr', 'Potri.009G138000' => 'ptr', 'Potri.010G094000' => 'ptr', 'Potri.011G053000' => 'ptr', 'Potri.011G119300' => 'ptr', 'Potri.013G113700' => 'ptr', 'Potri.018G107800' => 'ptr', 'Potri.019G084100' => 'ptr', 'Pp3c14_23720' => 'ppa', 'Pp3c16_6340' => 'ppa', 'Pp3c23_13420' => 'ppa', 'Pp3c24_2740' => 'ppa', 'Pp3c25_860' => 'ppa', 'Pp3c8_21750' => 'ppa', 'Prupe.1G273000' => 'ppe', 'Prupe.1G273700' => 'ppe', 'Prupe.1G274100' => 'ppe', 'Prupe.2G023300' => 'ppe', 'Prupe.4G048000' => 'ppe', 'Prupe.4G080400' => 'ppe', 'Prupe.4G181200' => 'ppe', 'Prupe.8G056900' => 'ppe', 'Prupe.8G168700' => 'ppe', 'Psat1g189080' => 'psa', 'Psat1g204760' => 'psa', 'Psat4g175560' => 'psa', 'Psat4g177720' => 'psa', 'Psat5g244240' => 'psa', 'Psat6g010720' => 'psa', 'Psat6g187200' => 'psa', 'Psat7g072040' => 'psa', 'PSO017G3501' => 'pso', 'PSO063G2148' => 'pso', 'PSO063G5608' => 'pso', 'PSO210G6392' => 'pso', 'PSO541G2319' => 'pso', 'PSO541G2836' => 'pso', 'PSO541G4012' => 'pso', 'PSO541G6253' => 'pso', 'PSO675G0580' => 'pso', 'PSO675G0856' => 'pso', 'PSO675G5635' => 'pso', 'PSO675G9157' => 'pso', 'PSO832G1660' => 'pso', 'PSO832G1969' => 'pso', 'QL02p007186' => 'qlo', 'QL02p033904' => 'qlo', 'QL03p064391' => 'qlo', 'QL05p040593' => 'qlo', 'QL05p058242' => 'qlo', 'QL08p021825' => 'qlo', 'QL11p004981' => 'qlo', 'RcHm_v2.0_Chr1g0318301' => 'rch', 'RcHm_v2.0_Chr4g0418501' => 'rch', 'RcHm_v2.0_Chr4g0439971' => 'rch', 'RcHm_v2.0_Chr5g0008541' => 'rch', 'RcHm_v2.0_Chr5g0014101' => 'rch', 'RcHm_v2.0_Chr5g0014131' => 'rch', 'RcHm_v2.0_Chr5g0033621' => 'rch', 'RcHm_v2.0_Chr6g0272041' => 'rch', 'RcHm_v2.0_Chr6g0278831' => 'rch', 'Rhsim02G0130400' => 'rsi', 'Rhsim02G0171100' => 'rsi', 'Rhsim05G0053000' => 'rsi', 'Rhsim05G0053100' => 'rsi', 'Rhsim06G0096500' => 'rsi', 'Rhsim06G0096600' => 'rsi', 'Rhsim06G0199100' => 'rsi', 'Rhsim12G0062300' => 'rsi', 'Rhsim12G0062800' => 'rsi', 'Sabra02G0118600' => 'sbr', 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'Solyc03g079860.2' => 'sly', 'Solyc04g079770.3' => 'sly', 'Solyc05g007430.4' => 'sly', 'Solyc07g063150.3' => 'sly', 'Solyc08g016620.3' => 'sly', 'Solyc09g057590.3' => 'sly', 'Solyc09g057600.1' => 'sly', 'Solyc10g009050.3' => 'sly', 'Solyc11g017420.2' => 'sly', 'Sopen01g053810' => 'spe', 'Sopen02g023040' => 'spe', 'Sopen03g002440' => 'spe', 'Sopen04g033350' => 'spe', 'Sopen05g003310' => 'spe', 'Sopen07g004050' => 'spe', 'Sopen07g031340' => 'spe', 'Sopen08g006990' => 'spe', 'Sopen10g004830' => 'spe', 'Sopen11g009370' => 'spe', 'Sp1g24450' => 'spa', 'Sp1g29670' => 'spa', 'Sp1g39600' => 'spa', 'Sp2g11080' => 'spa', 'Sp2g13970' => 'spa', 'Sp4g16130' => 'spa', 'Sp6g13080' => 'spa', 'Sp7g37270' => 'spa', 'TAR371G0065' => 'tar', 'TAR376G0340' => 'tar', 'TAR376G0435' => 'tar', 'TAR381G0002' => 'tar', 'TAR381G1236' => 'tar', 'TAR624G0055' => 'tar', 'TAR624G0324' => 'tar', 'TAR624G0696' => 'tar', 'TAR624G0906' => 'tar', 'TAR625G0107' => 'tar', 'TAR626G0015' => 'tar', 'TAR626G1356' => 'tar', 'TAR627G0888' => 'tar', 'TAR628G0399' => 'tar', 'TAR628G1327' => 'tar', 'TAR629G2831' => 'tar', 'TAR629G2874' => 'tar', 'TAR633G1432' => 'tar', 'TAR633G2771' => 'tar', 'THA.LOC104803394' => 'tha', 'THA.LOC104805153' => 'tha', 'THA.LOC104806784' => 'tha', 'THA.LOC104810473' => 'tha', 'THA.LOC104813100' => 'tha', 'THA.LOC104814215' => 'tha', 'THA.LOC104815554' => 'tha', 'THA.LOC104820544' => 'tha', 'THA.LOC104824754' => 'tha', 'THA.LOC104827717' => 'tha', 'Thecc.02G031400' => 'tca', 'Thecc.02G055900' => 'tca', 'Thecc.02G350800' => 'tca', 'Thecc.06G150900' => 'tca', 'Thecc.06G186600' => 'tca', 'Thecc.07G089600' => 'tca', 'Thecc.08G020400' => 'tca', 'Thecc.08G182100' => 'tca', 'Thhalv10000873m.g' => 'esa', 'Thhalv10004185m.g' => 'esa', 'Thhalv10006981m.g' => 'esa', 'Thhalv10007204m.g' => 'esa', 'Thhalv10011374m.g' => 'esa', 'Thhalv10013482m.g' => 'esa', 'Thhalv10017801m.g' => 'esa', 'Thhalv10024983m.g' => 'esa', 'TPR.G12072' => 'tpr', 'TPR.G15769' => 'tpr', 'TPR.G16504' => 'tpr', 'TPR.G16506' => 'tpr', 'TPR.G24345' => 'tpr', 'TPR.G26666' => 'tpr', 'TPR.G27320' => 'tpr', 'TPR.G31819' => 'tpr', 'TPR.G38879' => 'tpr', 'TPR.G39015' => 'tpr', 'TPR.G8819' => 'tpr', 'TWI09G0924' => 'twi', 'TWI12G0811' => 'twi', 'TWI12G1294' => 'twi', 'TWI31G0150' => 'twi', 'TWI36G1262' => 'twi', 'TWI38G1287' => 'twi', 'TWI38G1633' => 'twi', 'TWI38G1982' => 'twi', 'TWI39G0116' => 'twi', 'TWI60G1011' => 'twi', 'TWI63G0171' => 'twi', 'TWI73G0839' => 'twi', 'TWI79G1511' => 'twi', 'unitig_0.g915' => 'ugi', 'unitig_0.g916' => 'ugi', 'unitig_21.g20219' => 'ugi', 'unitig_21.g20416' => 'ugi', 'unitig_578.g16132' => 'ugi', 'unitig_578.g16718' => 'ugi', 'unitig_62.g23481' => 'ugi', 'unitig_744.g24535' => 'ugi', 'unitig_749.g13525' => 'ugi', 'vmacro01248' => 'vma', 'vmacro02290' => 'vma', 'vmacro10946' => 'vma', 'vmacro11865' => 'vma', 'vmacro12493' => 'vma', 'vmacro17322' => 'vma', 'vmacro21599' => 'vma', 'vmacro23041' => 'vma', 'VMungo0251G0004' => 'vmu', 'VMungo0251G2639' => 'vmu', 'VMungo0251G2967' => 'vmu', 'VMungo0540G0864' => 'vmu', 'VMungo0540G1569' => 'vmu', 'VMungo0647G0317' => 'vmu', 'VMungo0720G1373' => 'vmu', 'VMungo0720G1508' => 'vmu', 'VMungo1080G0485' => 'vmu', 'VMungo1215G3177' => 'vmu', 'Zm00001eb112600' => 'zma', 'Zm00001eb120220' => 'zma', 'Zm00001eb153240' => 'zma', 'Zm00001eb168880' => 'zma', 'Zm00001eb213920' => 'zma', 'Zm00001eb228280' => 'zma', 'Zm00001eb254580' => 'zma', 'Zm00001eb272180' => 'zma', 'Zm00001eb293190' => 'zma', 'Zm00001eb322930' => 'zma', 'Zm00001eb353360' => 'zma', 'Zm00001eb353390' => 'zma', 'Zm00001eb353430' => 'zma', 'Zm00001eb353440' => 'zma', 'Zm00001eb353780' => 'zma' ), 'gf_id' => 'HOM05D000499', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000499' ), 'data_identifier' => 'HOM05D000499', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000499', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1066', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p29780' => 'bna', 'A02p33180' => 'bna', 'A03p16470' => 'bna', 'A03p66010' => 'bna', 'A04p25970' => 'bna', 'A06p01270' => 'bna', 'A06p46080' => 'bna', 'A07p11400' => 'bna', 'A08p01840' => 'bna', 'A08p08230' => 'bna', 'A08p25740' => 'bna', 'A09p32070' => 'bna', 'A09p37830' => 'bna', 'A09p42840' => 'bna', 'A09p42850' => 'bna', 'Aa31LG10G2060' => 'aar', 'Aa31LG2G7410' => 'aar', 'Aa31LG6G10200' => 'aar', 'Aa31LG6G16680' => 'aar', 'Aa31LG6G8470' => 'aar', 'Aa31LG9G12730' => 'aar', 'Aa31LG9G13680' => 'aar', 'Aa31LG9G14920' => 'aar', 'Aa31LG9G6650' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4977' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5467' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3254' => 'aag', 'Actinidia02578' => 'ach', 'Actinidia07693' => 'ach', 'Actinidia08413' => 'ach', 'Actinidia08414' => 'ach', 'Actinidia15289' => 'ach', 'Actinidia19871' => 'ach', 'Actinidia21475' => 'ach', 'Actinidia22576' => 'ach', 'Actinidia28327' => 'ach', 'Actinidia32491' => 'ach', 'Actinidia39463' => 'ach', 'Actinidia39571' => 'ach', 'Ah.01g013750' => 'amhyb', 'Ah.01g023210' => 'amhyb', 'Ah.04g164850' => 'amhyb', 'Ah.05g178060' => 'amhyb', 'Ah.07g204270' => 'amhyb', 'Ah.07g208480' => 'amhyb', 'Ah.09g237410' => 'amhyb', 'Ah.14g089460' => 'amhyb', 'AL1G41790' => 'aly', 'AL1G49050' => 'aly', 'AL1G53810' => 'aly', 'AL1G61400' => 'aly', 'AL4G18580' => 'aly', 'AL5G12510' => 'aly', 'AL5G12540' => 'aly', 'AL6G43230' => 'aly', 'AL7G10370' => 'aly', 'AL7G19250' => 'aly', 'AL8G12240' => 'aly', 'AL8G18540' => 'aly', 'Aqoxy1G02409' => 'aox', 'Aqoxy2G03993' => 'aox', 'Aqoxy3G03357' => 'aox', 'Aqoxy4G00785' => 'aox', 'Aqoxy5G02598' => 'aox', 'Aqoxy6G00132' => 'aox', 'Aqoxy7G01776' => 'aox', 'Aqoxy7G02316' => 'aox', 'Aqoxy7G03973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.12AFKW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B8730' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27IQR1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3F75VG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3RE0GA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41TCQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.527VTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FIR39' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5W8UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DA38EV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ63HS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H1I32C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HC27T5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4M8AP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7N3CZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9UVDZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LS1NQA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT1D4B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SKC4TM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCFV76' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF9Q1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQWD9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1ZM88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WE07RT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YCK7VH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJE6Q6' => 'arhy', 'AT1G28240' => 'ath', 'AT1G34550' => 'ath', 'AT1G53040' => 'ath', 'AT2G02910' => 'ath', 'AT4G09630' => 'ath', 'AT4G38500' => 'ath', 'AT5G42660' => 'ath', 'AT5G46220' => 'ath', 'ATR0152G026' => 'atr', 'ATR0564G343' => 'atr', 'ATR0706G151' => 'atr', 'ATR0733G207' => 'atr', 'ATR0751G234' => 'atr', 'ATR0807G048' => 'atr', 'ATR1091G084' => 'atr', 'Atru.chr10.1229' => 'acertr', 'Atru.chr10.1230' => 'acertr', 'Atru.chr10.1874' => 'acertr', 'Atru.chr11.1808' => 'acertr', 'Atru.chr13.1795' => 'acertr', 'Atru.chr13.570' => 'acertr', 'Atru.chr2.2608' => 'acertr', 'Atru.chr2.2609' => 'acertr', 'Atru.chr5.3428' => 'acertr', 'Atru.chr8.1171' => 'acertr', 'AUR62004651' => 'cqu', 'AUR62008675' => 'cqu', 'AUR62010014' => 'cqu', 'AUR62013004' => 'cqu', 'AUR62014825' => 'cqu', 'AUR62015015' => 'cqu', 'AUR62015151' => 'cqu', 'AUR62017020' => 'cqu', 'AUR62019422' => 'cqu', 'AUR62023570' => 'cqu', 'AUR62025571' => 'cqu', 'AUR62029098' => 'cqu', 'AUR62033863' => 'cqu', 'AUR62034296' => 'cqu', 'AUR62040075' => 'cqu', 'BcaB02g07334' => 'bca', 'BcaB02g10575' => 'bca', 'BcaB03g12119' => 'bca', 'BcaB03g12120' => 'bca', 'BcaB03g13945' => 'bca', 'BcaB04g17123' => 'bca', 'BcaB04g17867' => 'bca', 'BcaB04g19839' => 'bca', 'BcaB07g30317' => 'bca', 'BcaB07g32432' => 'bca', 'BcaB07g33362' => 'bca', 'BcaB08g36611' => 'bca', 'BcaC01g00028' => 'bca', 'BcaC01g01356' => 'bca', 'BcaC01g02034' => 'bca', 'BcaC01g06051' => 'bca', 'BcaC03g16839' => 'bca', 'BcaC03g17176' => 'bca', 'BcaC05g26829' => 'bca', 'BcaC06g31490' => 'bca', 'BcaC06g35344' => 'bca', 'BcaC06g36570' => 'bca', 'BcaC07g37537' => 'bca', 'BcaC08g43491' => 'bca', 'BcaC08g43773' => 'bca', 'BcaNung00234' => 'bca', 'BcaNung01982' => 'bca', 'BcaNung03707' => 'bca', 'BcaNung06454' => 'bca', 'BolC2t10762H' => 'bol', 'BolC2t11191H' => 'bol', 'BolC3t14322H' => 'bol', 'BolC3t19747H' => 'bol', 'BolC3t21425H' => 'bol', 'BolC4t27800H' => 'bol', 'BolC5t31423H' => 'bol', 'BolC6t35951H' => 'bol', 'BolC6t36282H' => 'bol', 'BolC7t40678H' => 'bol', 'BolC7t40679H' => 'bol', 'BolC7t42222H' => 'bol', 'BolC7t43492H' => 'bol', 'BolC7t46785H' => 'bol', 'BolC8t47853H' => 'bol', 'BolC9t56805H' => 'bol', 'BraA02t08000Z' => 'bra', 'BraA02t08341Z' => 'bra', 'BraA03t10936Z' => 'bra', 'BraA03t15657Z' => 'bra', 'BraA04t18100Z' => 'bra', 'BraA05t20523Z' => 'bra', 'BraA06t23353Z' => 'bra', 'BraA06t27473Z' => 'bra', 'BraA06t27769Z' => 'bra', 'BraA07t28928Z' => 'bra', 'BraA08t32236Z' => 'bra', 'BraA08t32841Z' => 'bra', 'BraA08t34524Z' => 'bra', 'BraA09t38742Z' => 'bra', 'BraA09t39295Z' => 'bra', 'C02p47180' => 'bna', 'C02p50990' => 'bna', 'C03p19360' => 'bna', 'C03p74950' => 'bna', 'C03p91000' => 'bna', 'C04p63260' => 'bna', 'C05p27050' => 'bna', 'C06p08750' => 'bna', 'C06p11490' => 'bna', 'C07p02820' => 'bna', 'C07p17180' => 'bna', 'C07p29440' => 'bna', 'C07p63730' => 'bna', 'C09p39260' => 'bna', 'CAN.G1164.34' => 'can', 'CAN.G1164.39' => 'can', 'CAN.G1530.3' => 'can', 'CAN.G162.61' => 'can', 'CAN.G176.6' => 'can', 'CAN.G289.49' => 'can', 'CAN.G370.21' => 'can', 'CAN.G370.22' => 'can', 'CAN.G371.117' => 'can', 'CAN.G58.37' => 'can', 'CAN.G588.98' => 'can', 'CANSAT21G2266' => 'cansat', 'CANSAT25G2799' => 'cansat', 'CANSAT35G0862' => 'cansat', 'CANSAT35G1704' => 'cansat', 'CANSAT35G1760' => 'cansat', 'CANSAT56G3971' => 'cansat', 'CANSAT56G4116' => 'cansat', 'CANSAT80G1259' => 'cansat', 'CARHR027730' => 'chi', 'CARHR033880' => 'chi', 'CARHR043270' => 'chi', 'CARHR145330' => 'chi', 'CARHR145340' => 'chi', 'CARHR175570' => 'chi', 'CARHR181570' => 'chi', 'CARHR258470' => 'chi', 'CARHR260490' => 'chi', 'CARHR294220' => 'chi', 'Carub.0001s2668' => 'cru', 'Carub.0001s3257' => 'cru', 'Carub.0001s4220' => 'cru', 'Carub.0005s0179' => 'cru', 'Carub.0006s2807' => 'cru', 'Carub.0007s0039' => 'cru', 'Carub.0008s0169' => 'cru', 'Carub.0008s0636' => 'cru', 'Ca_00338_v3' => 'car', 'Ca_00542_v3' => 'car', 'Ca_01844_v3' => 'car', 'Ca_10611_v3' => 'car', 'Ca_13326_v3' => 'car', 'Ca_17944_v3' => 'car', 'Ca_18546_v3' => 'car', 'Ca_24219_v3' => 'car', 'Ca_29972_v3' => 'car', 'CBR_g3681' => 'cbr', 'CBR_g40021' => 'cbr', 'Cc01_g08140' => 'ccan', 'Cc02_g13410' => 'ccan', 'Cc02_g37480' => 'ccan', 'Cc05_g12030' => 'ccan', 'Cc09_g03370' => 'ccan', 'Cc09_g10300' => 'ccan', 'Cc10_g03530' => 'ccan', 'Cc10_g11380' => 'ccan', 'CDE01G0176' => 'cde', 'CDE02G0675' => 'cde', 'CDE02G0942' => 'cde', 'CDE02G1153' => 'cde', 'CDE02G4177' => 'cde', 'CDE04G2117' => 'cde', 'CDE04G2736' => 'cde', 'CDE08G1161' => 'cde', 'CDE09G1238' => 'cde', 'Cfa000467' => 'cfa', 'Cfa000947' => 'cfa', 'Cfa004969' => 'cfa', 'Cfa005284' => 'cfa', 'Cfa008993' => 'cfa', 'Cfa018187' => 'cfa', 'Cfa018454' => 'cfa', 'Cfa020585' => 'cfa', 'Ciclev10000424m.g' => 'ccl', 'Ciclev10003605m.g' => 'ccl', 'Ciclev10007828m.g' => 'ccl', 'Ciclev10014620m.g' => 'ccl', 'Ciclev10015169m.g' => 'ccl', 'Ciclev10018291m.g' => 'ccl', 'Ciclev10028256m.g' => 'ccl', 'Ciclev10033822m.g' => 'ccl', 'CiPaw.05G060300' => 'cil', 'CiPaw.05G085000' => 'cil', 'CiPaw.06G083700' => 'cil', 'CiPaw.06G120300' => 'cil', 'CiPaw.09G060500' => 'cil', 'CiPaw.09G123800' => 'cil', 'CiPaw.11G169700' => 'cil', 'CiPaw.12G118300' => 'cil', 'CiPaw.15G071000' => 'cil', 'CiPaw.15G081900' => 'cil', 'ClCG01G024610' => 'cla', 'ClCG03G006070' => 'cla', 'ClCG05G019250' => 'cla', 'ClCG09G009500' => 'cla', 'ClCG11G008200' => 'cla', 'ClCG11G018080' => 'cla', 'COL.COLO4_17373' => 'col', 'COL.COLO4_22994' => 'col', 'COL.COLO4_26389' => 'col', 'COL.COLO4_27170' => 'col', 'COL.COLO4_31074' => 'col', 'COL.COLO4_31465' => 'col', 'COL.COLO4_36438' => 'col', 'COL.COLO4_36439' => 'col', 'Cpa.g.c38781' => 'cpa', 'Cpa.g.sc128.12' => 'cpa', 'Cpa.g.sc166.7' => 'cpa', 'Cpa.g.sc166.8' => 'cpa', 'Cpa.g.sc20.111' => 'cpa', 'Cpa.g.sc27.31' => 'cpa', 'Cpa.g.sc64.36' => 'cpa', 'Cpa.g.sc64.37' => 'cpa', 'Cpa.g.sc66.49' => 'cpa', 'Cpa.g.sc80.64' => 'cpa', 'CsaV3_1G012320' => 'csa', 'CsaV3_2G008480' => 'csa', 'CsaV3_2G033450' => 'csa', 'CsaV3_3G044830' => 'csa', 'CsaV3_4G033710' => 'csa', 'CsaV3_6G051730' => 'csa', 'CsaV3_7G025350' => 'csa', 'CSS0001067' => 'camsi', 'CSS0005996' => 'camsi', 'CSS0006590' => 'camsi', 'CSS0009673' => 'camsi', 'CSS0010201' => 'camsi', 'CSS0010549' => 'camsi', 'CSS0011364' => 'camsi', 'CSS0014473' => 'camsi', 'CSS0014961' => 'camsi', 'CSS0020191' => 'camsi', 'CSS0021165' => 'camsi', 'CSS0022306' => 'camsi', 'CSS0030591' => 'camsi', 'CSS0030696' => 'camsi', 'CSS0032653' => 'camsi', 'CSS0037487' => 'camsi', 'CSS0041102' => 'camsi', 'CSS0041261' => 'camsi', 'CSS0046246' => 'camsi', 'CSS0049256' => 'camsi', 'DCAR_004075' => 'dca', 'DCAR_011538' => 'dca', 'DCAR_019553' => 'dca', 'DCAR_020952' => 'dca', 'DCAR_021739' => 'dca', 'DCAR_027407' => 'dca', 'DCAR_027913' => 'dca', 'DCAR_028066' => 'dca', 'Dinv05899' => 'din', 'Dinv07563' => 'din', 'Dinv08010' => 'din', 'Dinv14125' => 'din', 'Dinv20172' => 'din', 'Dinv30743' => 'din', 'Dinv31229' => 'din', 'Dinv34162' => 'din', 'Dinv36028' => 'din', 'Dinv39368' => 'din', 'Dinv40565' => 'din', 'Dinv41706' => 'din', 'Duzib052G0089' => 'dzi', 'Duzib116G0641' => 'dzi', 'Duzib132G0069' => 'dzi', 'Duzib132G1219' => 'dzi', 'Duzib147G0278' => 'dzi', 'Duzib160G0480' => 'dzi', 'Duzib170G0661' => 'dzi', 'Duzib177G0591' => 'dzi', 'Duzib187G1353' => 'dzi', 'Duzib192G0858' => 'dzi', 'Duzib192G0883' => 'dzi', 'Duzib213G0506' => 'dzi', 'Duzib235G0289' => 'dzi', 'Duzib251G0422' => 'dzi', 'ECA232G3898' => 'eca', 'ECA233G5950' => 'eca', 'ECA234G1699' => 'eca', 'ECA234G2421' => 'eca', 'ECA236G0426' => 'eca', 'ECA236G4331' => 'eca', 'ECA248G2573' => 'eca', 'EL10Ac1g00077' => 'bvu', 'EL10Ac1g01746' => 'bvu', 'EL10Ac2g03464' => 'bvu', 'EL10Ac4g08176' => 'bvu', 'EL10Ac7g17521' => 'bvu', 'EL10Ac8g20386' => 'bvu', 'EL10Ac9g21343' => 'bvu', 'EL10Ac9g22688' => 'bvu', 'Eucgr.B03434' => 'egr', 'Eucgr.D00618' => 'egr', 'Eucgr.E02395' => 'egr', 'Eucgr.F01129' => 'egr', 'Eucgr.F02622' => 'egr', 'Eucgr.F04207' => 'egr', 'FAN01G0570' => 'fan', 'FAN03G3351' => 'fan', 'FAN06G3702' => 'fan', 'FAN07G2149' => 'fan', 'FAN10G3758' => 'fan', 'FAN11G1170' => 'fan', 'FAN11G2050' => 'fan', 'FAN11G2724' => 'fan', 'FAN12G1700' => 'fan', 'FAN12G2028' => 'fan', 'FAN15G1160' => 'fan', 'FAN15G3063' => 'fan', 'FAN16G2540' => 'fan', 'FAN16G3077' => 'fan', 'FAN16G3624' => 'fan', 'FAN17G0221' => 'fan', 'FAN20G2492' => 'fan', 'FAN20G2905' => 'fan', 'FAN21G0548' => 'fan', 'FAN21G1300' => 'fan', 'FAN22G0077' => 'fan', 'FAN22G1315' => 'fan', 'FAN24G1280' => 'fan', 'FAN24G1445' => 'fan', 'FAN24G3527' => 'fan', 'FAN25G0464' => 'fan', 'FAN25G2885' => 'fan', 'FAN25G3270' => 'fan', 'FAN27G1101' => 'fan', 'FAN27G2846' => 'fan', 'FAN27G3524' => 'fan', 'FvH4_2g11770' => 'fve', 'FvH4_2g15630' => 'fve', 'FvH4_3g05570' => 'fve', 'FvH4_3g09110' => 'fve', 'FvH4_3g19940' => 'fve', 'FvH4_4g04821' => 'fve', 'FvH4_4g31480' => 'fve', 'FvH4_7g01740' => 'fve', 'Glyma.05G130400' => 'gma', 'Glyma.05G156400' => 'gma', 'Glyma.07G197000' => 'gma', 'Glyma.08G085151' => 'gma', 'Glyma.08G114500' => 'gma', 'Glyma.08G300400' => 'gma', 'Glyma.10G215800' => 'gma', 'Glyma.12G224400' => 'gma', 'Glyma.13G179300' => 'gma', 'Glyma.13G218151' => 'gma', 'Glyma.13G238800' => 'gma', 'Glyma.13G276900' => 'gma', 'Glyma.14G078200' => 'gma', 'Glyma.15G074500' => 'gma', 'Glyma.15G094100' => 'gma', 'Glyma.17G247200' => 'gma', 'Glyma.18G120100' => 'gma', 'Glyma.20G176000' => 'gma', 'Gohir.A01G063600' => 'ghi', 'Gohir.A01G170301' => 'ghi', 'Gohir.A02G060500' => 'ghi', 'Gohir.A05G133850' => 'ghi', 'Gohir.A05G161400' => 'ghi', 'Gohir.A06G012900' => 'ghi', 'Gohir.A06G035901' => 'ghi', 'Gohir.A06G127100' => 'ghi', 'Gohir.A06G210500' => 'ghi', 'Gohir.A08G008650' => 'ghi', 'Gohir.A09G072700' => 'ghi', 'Gohir.A09G088301' => 'ghi', 'Gohir.A10G040600' => 'ghi', 'Gohir.A12G036300' => 'ghi', 'Gohir.A12G143350' => 'ghi', 'Gohir.A12G165500' => 'ghi', 'Gohir.A13G145700' => 'ghi', 'Gohir.D01G050000' => 'ghi', 'Gohir.D01G051366' => 'ghi', 'Gohir.D01G161350' => 'ghi', 'Gohir.D02G065900' => 'ghi', 'Gohir.D05G164200' => 'ghi', 'Gohir.D05G355500' => 'ghi', 'Gohir.D06G010400' => 'ghi', 'Gohir.D06G111250' => 'ghi', 'Gohir.D06G132000' => 'ghi', 'Gohir.D06G210500' => 'ghi', 'Gohir.D07G165675' => 'ghi', 'Gohir.D08G062240' => 'ghi', 'Gohir.D08G086101' => 'ghi', 'Gohir.D08G138060' => 'ghi', 'Gohir.D09G072300' => 'ghi', 'Gohir.D10G041400' => 'ghi', 'Gohir.D11G191020' => 'ghi', 'Gohir.D11G212066' => 'ghi', 'Gohir.D12G036300' => 'ghi', 'Gohir.D12G168600' => 'ghi', 'Gohir.D13G150600' => 'ghi', 'Gorai.001G057300' => 'gra', 'Gorai.002G069900' => 'gra', 'Gorai.002G200000' => 'gra', 'Gorai.003G067600' => 'gra', 'Gorai.005G074800' => 'gra', 'Gorai.006G087300' => 'gra', 'Gorai.008G037500' => 'gra', 'Gorai.008G181400' => 'gra', 'Gorai.009G169400' => 'gra', 'Gorai.009G387900' => 'gra', 'Gorai.010G013300' => 'gra', 'Gorai.010G153800' => 'gra', 'Gorai.010G255800' => 'gra', 'Gorai.011G043700' => 'gra', 'Gorai.011G198900' => 'gra', 'Gorai.013G168400' => 'gra', 'GSVIVG01005212001' => 'vvi', 'GSVIVG01006163001' => 'vvi', 'GSVIVG01009625001' => 'vvi', 'GSVIVG01014338001' => 'vvi', 'GSVIVG01020005001' => 'vvi', 'GSVIVG01021450001' => 'vvi', 'GSVIVG01023975001' => 'vvi', 'GSVIVG01034490001' => 'vvi', 'HanXRQChr04g0112071' => 'han', 'HanXRQChr05g0131151' => 'han', 'HanXRQChr09g0262371' => 'han', 'HanXRQChr09g0268401' => 'han', 'HanXRQChr10g0279241' => 'han', 'HanXRQChr10g0297961' => 'han', 'HanXRQChr11g0326231' => 'han', 'HanXRQChr11g0328471' => 'han', 'HanXRQChr16g0507941' => 'han', 'HanXRQChr17g0560211' => 'han', 'Haze_02108' => 'cav', 'Haze_02428' => 'cav', 'Haze_05593' => 'cav', 'Haze_06448' => 'cav', 'Haze_09427' => 'cav', 'Haze_12022' => 'cav', 'Haze_17612' => 'cav', 'Haze_17928' => 'cav', 'Hma1.2p1_0032F.1_g019250' => 'hma', 'Hma1.2p1_0163F.1_g072690' => 'hma', 'Hma1.2p1_0265F.1_g106710' => 'hma', 'Hma1.2p1_0286F.1_g113970' => 'hma', 'Hma1.2p1_0363F.1_g136640' => 'hma', 'Hma1.2p1_0584F.1_g183470' => 'hma', 'Hma1.2p1_0885F.1_g232570' => 'hma', 'HPP92_006022' => 'vpl', 'HPP92_007320' => 'vpl', 'HPP92_011521' => 'vpl', 'HPP92_019387' => 'vpl', 'HPP92_024038' => 'vpl', 'Hund05891' => 'sun', 'Hund06450' => 'sun', 'Hund12053' => 'sun', 'Hund16800' => 'sun', 'Hund21222' => 'sun', 'Hund22896' => 'sun', 'Hund23746' => 'sun', 'Hund27083' => 'sun', 'Lalb_Chr02g0141831' => 'lal', 'Lalb_Chr02g0141841' => 'lal', 'Lalb_Chr05g0220411' => 'lal', 'Lalb_Chr06g0162081' => 'lal', 'Lalb_Chr09g0327651' => 'lal', 'Lalb_Chr13g0295051' => 'lal', 'Lalb_Chr15g0086801' => 'lal', 'Lalb_Chr16g0383781' => 'lal', 'Lalb_Chr16g0383791' => 'lal', 'Lalb_Chr18g0055441' => 'lal', 'Lalb_Chr18g0059611' => 'lal', 'Lalb_Chr20g0109661' => 'lal', 'Lalb_Chr20g0109831' => 'lal', 'Lalb_Chr20g0121871' => 'lal', 'Lalb_Chr22g0355361' => 'lal', 'Lalb_Chr25g0286371' => 'lal', 'Lj1A1187G43' => 'lonja', 'Lj1A1205T50' => 'lonja', 'Lj1A800G33' => 'lonja', 'Lj1C1187T7' => 'lonja', 'Lj1C843T11' => 'lonja', 'Lj1g0010940' => 'lja', 'Lj2A288T69' => 'lonja', 'Lj3g0024276' => 'lja', 'Lj4A47T76' => 'lonja', 'Lj4g0005805' => 'lja', 'Lj4g0006097' => 'lja', 'Lj4g0008528' => 'lja', 'Lj4g0024907' => 'lja', 'Lj5g0012472' => 'lja', 'Lj5g0018648' => 'lja', 'Lj6C789G1' => 'lonja', 'Lj6g0004000' => 'lja', 'Lj7A292G67' => 'lonja', 'Lj7A292T64' => 'lonja', 'Lj9A400T58' => 'lonja', 'Lsat_1_v5_gn_1_126181' => 'lsa', 'Lsat_1_v5_gn_4_123041' => 'lsa', 'Lsat_1_v5_gn_4_133620' => 'lsa', 'Lsat_1_v5_gn_4_53221' => 'lsa', 'Lsat_1_v5_gn_4_71961' => 'lsa', 'Lsat_1_v5_gn_7_105241' => 'lsa', 'Lsat_1_v5_gn_7_21361' => 'lsa', 'Lsat_1_v5_gn_7_28860' => 'lsa', 'Lsat_1_v5_gn_7_31260' => 'lsa', 'Lsat_1_v5_gn_8_52801' => 'lsa', 'Manes.02G191400' => 'mes', 'Manes.03G110100' => 'mes', 'Manes.04G071100' => 'mes', 'Manes.05G100500' => 'mes', 'Manes.05G164700' => 'mes', 'Manes.15G087000' => 'mes', 'Manes.15G121500' => 'mes', 'Manes.16G028300' => 'mes', 'Manes.17G046100' => 'mes', 'Manes.17G069800' => 'mes', 'Manes.18G100500' => 'mes', 'Mapoly0002s0109' => 'mpo', 'Mapoly0024s0007' => 'mpo', 'Mapoly0089s0032' => 'mpo', 'MBI04_g42241_MAGBIO' => 'mbi', 'MBI05_g11988_MAGBIO' => 'mbi', 'MBI05_g35452_MAGBIO' => 'mbi', 'MBI07_g30179_MAGBIO' => 'mbi', 'MBI07_g35859_MAGBIO' => 'mbi', 'MBI07_g35860_MAGBIO' => 'mbi', 'MBI07_g37166_MAGBIO' => 'mbi', 'MBI08_g18172_MAGBIO' => 'mbi', 'MBI09_g08441_MAGBIO' => 'mbi', 'MBI13_g01676_MAGBIO' => 'mbi', 'MBI14_g42955_MAGBIO' => 'mbi', 'MBI16_g13161_MAGBIO' => 'mbi', 'MBI17_g27204_MAGBIO' => 'mbi', 'MBI19_g21595_MAGBIO' => 'mbi', 'MD00G1148400' => 'mdo', 'MD02G1301200' => 'mdo', 'MD03G1227800' => 'mdo', 'MD05G1041100' => 'mdo', 'MD05G1124800' => 'mdo', 'MD05G1284000' => 'mdo', 'MD05G1338800' => 'mdo', 'MD05G1338900' => 'mdo', 'MD07G1022800' => 'mdo', 'MD10G1047500' => 'mdo', 'MD10G1127500' => 'mdo', 'MD10G1262300' => 'mdo', 'MD10G1293800' => 'mdo', 'MD16G1074300' => 'mdo', 'Medtr1g021670' => 'mtr', 'Medtr1g096320' => 'mtr', 'Medtr2g013690' => 'mtr', 'Medtr2g019450' => 'mtr', 'Medtr2g085170' => 'mtr', 'Medtr4g088785' => 'mtr', 'Medtr8g055930' => 'mtr', 'Medtr8g085850' => 'mtr', 'MELO3C002605.2' => 'cme', 'MELO3C003891.2' => 'cme', 'MELO3C004012.2' => 'cme', 'MELO3C007134.2' => 'cme', 'MELO3C008118.2' => 'cme', 'MELO3C016700.2' => 'cme', 'MELO3C024127.2' => 'cme', 'MELO3C033361.2' => 'cme', 'MELO3C033362.2' => 'cme', 'Migut.C00430' => 'egut', 'Migut.C01246' => 'egut', 'Migut.E00101' => 'egut', 'Migut.H01486' => 'egut', 'Migut.H01939' => 'egut', 'Migut.K00360' => 'egut', 'Migut.M00910' => 'egut', 'Migut.M01139' => 'egut', 'Migut.N02677' => 'egut', 'MSTRG.13252' => 'ama', 'MSTRG.14701' => 'ama', 'MSTRG.1521' => 'ama', 'MSTRG.15884' => 'ama', 'MSTRG.16242' => 'ama', 'MSTRG.22285' => 'ama', 'MSTRG.22444' => 'ama', 'MSTRG.2349' => 'ama', 'MSTRG.26308' => 'ama', 'MSTRG.28296' => 'ama', 'MSTRG.9895' => 'ama', 'Nitab4.5_0000110g0060' => 'nta', 'Nitab4.5_0000420g0130' => 'nta', 'Nitab4.5_0000422g0030' => 'nta', 'Nitab4.5_0000560g0180' => 'nta', 'Nitab4.5_0000703g0100' => 'nta', 'Nitab4.5_0000786g0200' => 'nta', 'Nitab4.5_0001336g0020' => 'nta', 'Nitab4.5_0001796g0030' => 'nta', 'Nitab4.5_0003348g0060' => 'nta', 'Nitab4.5_0003698g0040' => 'nta', 'Nitab4.5_0003942g0090' => 'nta', 'Nitab4.5_0004775g0070' => 'nta', 'Nitab4.5_0004864g0030' => 'nta', 'Nitab4.5_0005615g0020' => 'nta', 'Nitab4.5_0009288g0030' => 'nta', 'Nitab4.5_0009341g0010' => 'nta', 'Nitab4.5_0009535g0010' => 'nta', 'Nn1g03995' => 'nnu', 'Nn1g04100' => 'nnu', 'Nn1g06530' => 'nnu', 'Nn3g16404' => 'nnu', 'Nn3g17212' => 'nnu', 'Nn3g20776' => 'nnu', 'Nn3g21923' => 'nnu', 'Nn5g27737' => 'nnu', 'Nn5g29461' => 'nnu', 'Nn7g38355' => 'nnu', 'Nn8g39873' => 'nnu', 'Oeu000548.2' => 'oeu', 'Oeu004672.1' => 'oeu', 'Oeu015605.2' => 'oeu', 'Oeu016092.1' => 'oeu', 'Oeu017879.3' => 'oeu', 'Oeu024910.1' => 'oeu', 'Oeu028965.1' => 'oeu', 'Oeu031269.1' => 'oeu', 'Oeu031270.1' => 'oeu', 'Oeu032535.1' => 'oeu', 'Oeu034151.1' => 'oeu', 'Oeu034152.1' => 'oeu', 'Oeu034588.2' => 'oeu', 'Oeu050846.1' => 'oeu', 'Oeu050849.2' => 'oeu', 'Oeu051063.2' => 'oeu', 'Oeu052368.1' => 'oeu', 'Oeu052370.1' => 'oeu', 'Os01g0210400' => 'osa', 'Os01g0304300' => 'osa', 'Os01g0749100' => 'osa', 'Os02g0745800' => 'osa', 'Os03g0769050' => 'osa', 'Os05g0531500' => 'osa', 'Os06g0724300' => 'osa', 'Os11g0198100' => 'osa', 'Peaxi162Scf00069g01425' => 'pax', 'Peaxi162Scf00280g00811' => 'pax', 'Peaxi162Scf00310g00615' => 'pax', 'Peaxi162Scf00362g00542' => 'pax', 'Peaxi162Scf00461g00310' => 'pax', 'Peaxi162Scf00530g00118' => 'pax', 'Peaxi162Scf00541g00057' => 'pax', 'Peaxi162Scf00661g00017' => 'pax', 'Peaxi162Scf00926g00027' => 'pax', 'Peaxi162Scf01064g00263' => 'pax', 'Peaxi162Scf01211g00135' => 'pax', 'PGR004G2336' => 'pgr', 'PGR042G0327' => 'pgr', 'PGR042G1957' => 'pgr', 'PGR042G2003' => 'pgr', 'PGR042G3929' => 'pgr', 'PGR083G1137' => 'pgr', 'PGR083G1364' => 'pgr', 'PGSC0003DMG400003381' => 'stu', 'PGSC0003DMG400003417' => 'stu', 'PGSC0003DMG400008981' => 'stu', 'PGSC0003DMG400012417' => 'stu', 'PGSC0003DMG400012823' => 'stu', 'PGSC0003DMG400016885' => 'stu', 'PGSC0003DMG400022812' => 'stu', 'PGSC0003DMG400029726' => 'stu', 'PGSC0003DMG401009243' => 'stu', 'PGSC0003DMG401031505' => 'stu', 'PGSC0003DMG402031505' => 'stu', 'Phvul.001G017600' => 'pvu', 'Phvul.002G193500' => 'pvu', 'Phvul.002G228900' => 'pvu', 'Phvul.002G236800' => 'pvu', 'Phvul.003G049500' => 'pvu', 'Phvul.005G072000' => 'pvu', 'Phvul.006G164800' => 'pvu', 'Phvul.006G185100' => 'pvu', 'Phvul.007G090000' => 'pvu', 'Potri.001G399800' => 'ptr', 'Potri.002G149900' => 'ptr', 'Potri.004G044100' => 'ptr', 'Potri.004G177600' => 'ptr', 'Potri.009G138000' => 'ptr', 'Potri.010G094000' => 'ptr', 'Potri.011G053000' => 'ptr', 'Potri.011G119300' => 'ptr', 'Potri.013G113700' => 'ptr', 'Potri.018G107800' => 'ptr', 'Potri.019G084100' => 'ptr', 'Pp3c14_23720' => 'ppa', 'Pp3c16_6340' => 'ppa', 'Pp3c23_13420' => 'ppa', 'Pp3c24_2740' => 'ppa', 'Pp3c25_860' => 'ppa', 'Pp3c8_21750' => 'ppa', 'Prupe.1G273000' => 'ppe', 'Prupe.1G273700' => 'ppe', 'Prupe.1G274100' => 'ppe', 'Prupe.2G023300' => 'ppe', 'Prupe.4G048000' => 'ppe', 'Prupe.4G080400' => 'ppe', 'Prupe.4G181200' => 'ppe', 'Prupe.8G056900' => 'ppe', 'Prupe.8G168700' => 'ppe', 'Psat1g189080' => 'psa', 'Psat1g204760' => 'psa', 'Psat4g175560' => 'psa', 'Psat4g177720' => 'psa', 'Psat5g244240' => 'psa', 'Psat6g010720' => 'psa', 'Psat6g187200' => 'psa', 'Psat7g072040' => 'psa', 'PSO017G3501' => 'pso', 'PSO063G2148' => 'pso', 'PSO063G5608' => 'pso', 'PSO210G6392' => 'pso', 'PSO541G2319' => 'pso', 'PSO541G2836' => 'pso', 'PSO541G4012' => 'pso', 'PSO541G6253' => 'pso', 'PSO675G0580' => 'pso', 'PSO675G0856' => 'pso', 'PSO675G5635' => 'pso', 'PSO675G9157' => 'pso', 'PSO832G1660' => 'pso', 'PSO832G1969' => 'pso', 'QL02p007186' => 'qlo', 'QL02p033904' => 'qlo', 'QL03p064391' => 'qlo', 'QL05p040593' => 'qlo', 'QL05p058242' => 'qlo', 'QL08p021825' => 'qlo', 'QL11p004981' => 'qlo', 'RcHm_v2.0_Chr1g0318301' => 'rch', 'RcHm_v2.0_Chr4g0418501' => 'rch', 'RcHm_v2.0_Chr4g0439971' => 'rch', 'RcHm_v2.0_Chr5g0008541' => 'rch', 'RcHm_v2.0_Chr5g0014101' => 'rch', 'RcHm_v2.0_Chr5g0014131' => 'rch', 'RcHm_v2.0_Chr5g0033621' => 'rch', 'RcHm_v2.0_Chr6g0272041' => 'rch', 'RcHm_v2.0_Chr6g0278831' => 'rch', 'Rhsim02G0130400' => 'rsi', 'Rhsim02G0171100' => 'rsi', 'Rhsim05G0053000' => 'rsi', 'Rhsim05G0053100' => 'rsi', 'Rhsim06G0096500' => 'rsi', 'Rhsim06G0096600' => 'rsi', 'Rhsim06G0199100' => 'rsi', 'Rhsim12G0062300' => 'rsi', 'Rhsim12G0062800' => 'rsi', 'Sabra02G0118600' => 'sbr', 'Sabra04G0027300' => 'sbr', 'Sabra04G0119500' => 'sbr', 'Sabra08G0112500' => 'sbr', 'Sabra11G0036800' => 'sbr', 'Sabra11G0103800' => 'sbr', 'Sabra13G0096300' => 'sbr', 'Sabra16G0262300' => 'sbr', 'Sabra18G0091700' => 'sbr', 'Sabra19G0095400' => 'sbr', 'SalBow6G3080' => 'sbo', 'SalBow7G1157' => 'sbo', 'SalBow7G2123' => 'sbo', 'SalBow7G2285' => 'sbo', 'SalBow7G3537' => 'sbo', 'SalBow8G2947' => 'sbo', 'SalBow8G4463' => 'sbo', 'SalBow8G5466' => 'sbo', 'Sc01g0001750' => 'sci', 'Sc02g0006640' => 'sci', 'Sc02g0006670' => 'sci', 'Sc04g0008220' => 'sci', 'Sc05g0006190' => 'sci', 'Sc08g0002760' => 'sci', 'Sc17g0006170' => 'sci', 'Sc22g0002050' => 'sci', 'Sc23g0001190' => 'sci', 'Sc24g0000980' => 'sci', 'Sed0006245' => 'sed', 'Sed0007543' => 'sed', 'Sed0009411' => 'sed', 'Sed0010765' => 'sed', 'Sed0012944' => 'sed', 'Sed0014682' => 'sed', 'Sed0016174' => 'sed', 'Sed0016796' => 'sed', 'Sed0020317' => 'sed', 'Sed0021467' => 'sed', 'SEGI_01316' => 'sgi', 'SEGI_03374' => 'sgi', 'SEGI_16265' => 'sgi', 'SEGI_18569' => 'sgi', 'SEGI_20351' => 'sgi', 'SEGI_26395' => 'sgi', 'SEGI_29469' => 'sgi', 'SEGI_34771' => 'sgi', 'SEGI_36769' => 'sgi', 'SEGI_37139' => 'sgi', 'SGA_v2.0_scaffold100G29687' => 'sas', 'SGA_v2.0_scaffold118G32472' => 'sas', 'SGA_v2.0_scaffold14G07051' => 'sas', 'SGA_v2.0_scaffold183G39845' => 'sas', 'SGA_v2.0_scaffold1G00174' => 'sas', 'SGA_v2.0_scaffold22G09714' => 'sas', 'SGA_v2.0_scaffold333G48992' => 'sas', 'SGA_v2.0_scaffold46G17491' => 'sas', 'SGA_v2.0_scaffold49G18294' => 'sas', 'SGA_v2.0_scaffold63G21658' => 'sas', 'SHI01741' => 'shi', 'SHI05771' => 'shi', 'SHI18077' => 'shi', 'SHI20525' => 'shi', 'SHI20527' => 'shi', 'SHI20528' => 'shi', 'SMO172G0185' => 'smo', 'SMO198G0020' => 'smo', 'SMO351G0006' => 'smo', 'SMO356G0118' => 'smo', 'SMO358G0296' => 'smo', 'SMO367G0079' => 'smo', 'SMO367G1277' => 'smo', 'Solyc01g014220.3' => 'sly', 'Solyc01g111770.2' => 'sly', 'Solyc02g078180.3' => 'sly', 'Solyc03g006430.3' => 'sly', 'Solyc03g006456.1' => 'sly', 'Solyc03g079860.2' => 'sly', 'Solyc04g079770.3' => 'sly', 'Solyc05g007430.4' => 'sly', 'Solyc07g063150.3' => 'sly', 'Solyc08g016620.3' => 'sly', 'Solyc09g057590.3' => 'sly', 'Solyc09g057600.1' => 'sly', 'Solyc10g009050.3' => 'sly', 'Solyc11g017420.2' => 'sly', 'Sopen01g053810' => 'spe', 'Sopen02g023040' => 'spe', 'Sopen03g002440' => 'spe', 'Sopen04g033350' => 'spe', 'Sopen05g003310' => 'spe', 'Sopen07g004050' => 'spe', 'Sopen07g031340' => 'spe', 'Sopen08g006990' => 'spe', 'Sopen10g004830' => 'spe', 'Sopen11g009370' => 'spe', 'Sp1g24450' => 'spa', 'Sp1g29670' => 'spa', 'Sp1g39600' => 'spa', 'Sp2g11080' => 'spa', 'Sp2g13970' => 'spa', 'Sp4g16130' => 'spa', 'Sp6g13080' => 'spa', 'Sp7g37270' => 'spa', 'TAR371G0065' => 'tar', 'TAR376G0340' => 'tar', 'TAR376G0435' => 'tar', 'TAR381G0002' => 'tar', 'TAR381G1236' => 'tar', 'TAR624G0055' => 'tar', 'TAR624G0324' => 'tar', 'TAR624G0696' => 'tar', 'TAR624G0906' => 'tar', 'TAR625G0107' => 'tar', 'TAR626G0015' => 'tar', 'TAR626G1356' => 'tar', 'TAR627G0888' => 'tar', 'TAR628G0399' => 'tar', 'TAR628G1327' => 'tar', 'TAR629G2831' => 'tar', 'TAR629G2874' => 'tar', 'TAR633G1432' => 'tar', 'TAR633G2771' => 'tar', 'THA.LOC104803394' => 'tha', 'THA.LOC104805153' => 'tha', 'THA.LOC104806784' => 'tha', 'THA.LOC104810473' => 'tha', 'THA.LOC104813100' => 'tha', 'THA.LOC104814215' => 'tha', 'THA.LOC104815554' => 'tha', 'THA.LOC104820544' => 'tha', 'THA.LOC104824754' => 'tha', 'THA.LOC104827717' => 'tha', 'Thecc.02G031400' => 'tca', 'Thecc.02G055900' => 'tca', 'Thecc.02G350800' => 'tca', 'Thecc.06G150900' => 'tca', 'Thecc.06G186600' => 'tca', 'Thecc.07G089600' => 'tca', 'Thecc.08G020400' => 'tca', 'Thecc.08G182100' => 'tca', 'Thhalv10000873m.g' => 'esa', 'Thhalv10004185m.g' => 'esa', 'Thhalv10006981m.g' => 'esa', 'Thhalv10007204m.g' => 'esa', 'Thhalv10011374m.g' => 'esa', 'Thhalv10013482m.g' => 'esa', 'Thhalv10017801m.g' => 'esa', 'Thhalv10024983m.g' => 'esa', 'TPR.G12072' => 'tpr', 'TPR.G15769' => 'tpr', 'TPR.G16504' => 'tpr', 'TPR.G16506' => 'tpr', 'TPR.G24345' => 'tpr', 'TPR.G26666' => 'tpr', 'TPR.G27320' => 'tpr', 'TPR.G31819' => 'tpr', 'TPR.G38879' => 'tpr', 'TPR.G39015' => 'tpr', 'TPR.G8819' => 'tpr', 'TWI09G0924' => 'twi', 'TWI12G0811' => 'twi', 'TWI12G1294' => 'twi', 'TWI31G0150' => 'twi', 'TWI36G1262' => 'twi', 'TWI38G1287' => 'twi', 'TWI38G1633' => 'twi', 'TWI38G1982' => 'twi', 'TWI39G0116' => 'twi', 'TWI60G1011' => 'twi', 'TWI63G0171' => 'twi', 'TWI73G0839' => 'twi', 'TWI79G1511' => 'twi', 'unitig_0.g915' => 'ugi', 'unitig_0.g916' => 'ugi', 'unitig_21.g20219' => 'ugi', 'unitig_21.g20416' => 'ugi', 'unitig_578.g16132' => 'ugi', 'unitig_578.g16718' => 'ugi', 'unitig_62.g23481' => 'ugi', 'unitig_744.g24535' => 'ugi', 'unitig_749.g13525' => 'ugi', 'vmacro01248' => 'vma', 'vmacro02290' => 'vma', 'vmacro10946' => 'vma', 'vmacro11865' => 'vma', 'vmacro12493' => 'vma', 'vmacro17322' => 'vma', 'vmacro21599' => 'vma', 'vmacro23041' => 'vma', 'VMungo0251G0004' => 'vmu', 'VMungo0251G2639' => 'vmu', 'VMungo0251G2967' => 'vmu', 'VMungo0540G0864' => 'vmu', 'VMungo0540G1569' => 'vmu', 'VMungo0647G0317' => 'vmu', 'VMungo0720G1373' => 'vmu', 'VMungo0720G1508' => 'vmu', 'VMungo1080G0485' => 'vmu', 'VMungo1215G3177' => 'vmu', 'Zm00001eb112600' => 'zma', 'Zm00001eb120220' => 'zma', 'Zm00001eb153240' => 'zma', 'Zm00001eb168880' => 'zma', 'Zm00001eb213920' => 'zma', 'Zm00001eb228280' => 'zma', 'Zm00001eb254580' => 'zma', 'Zm00001eb272180' => 'zma', 'Zm00001eb293190' => 'zma', 'Zm00001eb322930' => 'zma', 'Zm00001eb353360' => 'zma', 'Zm00001eb353390' => 'zma', 'Zm00001eb353430' => 'zma', 'Zm00001eb353440' => 'zma', 'Zm00001eb353780' => 'zma' ) $gf_id = 'HOM05D000499' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000499' ) $data_identifier = 'HOM05D000499' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 29, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 12, 'amhyb' => (int) 8, 'aly' => (int) 12, 'aox' => (int) 9, 'arhy' => (int) 26, 'ath' => (int) 8, 'atr' => (int) 7, 'acertr' => (int) 10, 'cqu' => (int) 15, 'bca' => (int) 29, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 11, 'cansat' => (int) 8, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 9, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 8, 'cpa' => (int) 10, 'csa' => (int) 7, 'camsi' => (int) 20, 'dca' => (int) 8, 'din' => (int) 12, 'dzi' => (int) 14, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 6, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 38, 'gra' => (int) 16, 'vvi' => (int) 8, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 5, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 11, 'lja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 11, 'mpo' => (int) 3, 'mbi' => (int) 14, 'mdo' => (int) 14, 'mtr' => (int) 8, 'cme' => (int) 9, 'egut' => (int) 9, 'ama' => (int) 11, 'nta' => (int) 17, 'nnu' => (int) 11, 'oeu' => (int) 18, 'osa' => (int) 8, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 6, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 9, 'rsi' => (int) 9, 'sbr' => (int) 10, 'sbo' => (int) 8, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 10, 'sas' => (int) 10, 'shi' => (int) 6, 'smo' => (int) 7, 'sly' => (int) 14, 'spe' => (int) 10, 'spa' => (int) 8, 'tar' => (int) 19, 'tha' => (int) 10, 'tca' => (int) 8, 'esa' => (int) 8, 'tpr' => (int) 11, 'twi' => (int) 13, 'ugi' => (int) 9, 'vma' => (int) 8, 'vmu' => (int) 10, 'zma' => (int) 15 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb353780' $species_info = array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ) $local_species = 'sbo' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000499', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1066', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p29780' => 'bna', 'A02p33180' => 'bna', 'A03p16470' => 'bna', 'A03p66010' => 'bna', 'A04p25970' => 'bna', 'A06p01270' => 'bna', 'A06p46080' => 'bna', 'A07p11400' => 'bna', 'A08p01840' => 'bna', 'A08p08230' => 'bna', 'A08p25740' => 'bna', 'A09p32070' => 'bna', 'A09p37830' => 'bna', 'A09p42840' => 'bna', 'A09p42850' => 'bna', 'Aa31LG10G2060' => 'aar', 'Aa31LG2G7410' => 'aar', 'Aa31LG6G10200' => 'aar', 'Aa31LG6G16680' => 'aar', 'Aa31LG6G8470' => 'aar', 'Aa31LG9G12730' => 'aar', 'Aa31LG9G13680' => 'aar', 'Aa31LG9G14920' => 'aar', 'Aa31LG9G6650' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4977' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5467' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3254' => 'aag', 'Actinidia02578' => 'ach', 'Actinidia07693' => 'ach', 'Actinidia08413' => 'ach', 'Actinidia08414' => 'ach', 'Actinidia15289' => 'ach', 'Actinidia19871' => 'ach', 'Actinidia21475' => 'ach', 'Actinidia22576' => 'ach', 'Actinidia28327' => 'ach', 'Actinidia32491' => 'ach', 'Actinidia39463' => 'ach', 'Actinidia39571' => 'ach', 'Ah.01g013750' => 'amhyb', 'Ah.01g023210' => 'amhyb', 'Ah.04g164850' => 'amhyb', 'Ah.05g178060' => 'amhyb', 'Ah.07g204270' => 'amhyb', 'Ah.07g208480' => 'amhyb', 'Ah.09g237410' => 'amhyb', 'Ah.14g089460' => 'amhyb', 'AL1G41790' => 'aly', 'AL1G49050' => 'aly', 'AL1G53810' => 'aly', 'AL1G61400' => 'aly', 'AL4G18580' => 'aly', 'AL5G12510' => 'aly', 'AL5G12540' => 'aly', 'AL6G43230' => 'aly', 'AL7G10370' => 'aly', 'AL7G19250' => 'aly', 'AL8G12240' => 'aly', 'AL8G18540' => 'aly', 'Aqoxy1G02409' => 'aox', 'Aqoxy2G03993' => 'aox', 'Aqoxy3G03357' => 'aox', 'Aqoxy4G00785' => 'aox', 'Aqoxy5G02598' => 'aox', 'Aqoxy6G00132' => 'aox', 'Aqoxy7G01776' => 'aox', 'Aqoxy7G02316' => 'aox', 'Aqoxy7G03973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.12AFKW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B8730' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27IQR1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3F75VG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3RE0GA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41TCQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.527VTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FIR39' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5W8UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DA38EV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ63HS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H1I32C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HC27T5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4M8AP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7N3CZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9UVDZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LS1NQA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT1D4B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SKC4TM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCFV76' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF9Q1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQWD9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1ZM88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WE07RT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YCK7VH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJE6Q6' => 'arhy', 'AT1G28240' => 'ath', 'AT1G34550' => 'ath', 'AT1G53040' => 'ath', 'AT2G02910' => 'ath', 'AT4G09630' => 'ath', 'AT4G38500' => 'ath', 'AT5G42660' => 'ath', 'AT5G46220' => 'ath', 'ATR0152G026' => 'atr', 'ATR0564G343' => 'atr', 'ATR0706G151' => 'atr', 'ATR0733G207' => 'atr', 'ATR0751G234' => 'atr', 'ATR0807G048' => 'atr', 'ATR1091G084' => 'atr', 'Atru.chr10.1229' => 'acertr', 'Atru.chr10.1230' => 'acertr', 'Atru.chr10.1874' => 'acertr', 'Atru.chr11.1808' => 'acertr', 'Atru.chr13.1795' => 'acertr', 'Atru.chr13.570' => 'acertr', 'Atru.chr2.2608' => 'acertr', 'Atru.chr2.2609' => 'acertr', 'Atru.chr5.3428' => 'acertr', 'Atru.chr8.1171' => 'acertr', 'AUR62004651' => 'cqu', 'AUR62008675' => 'cqu', 'AUR62010014' => 'cqu', 'AUR62013004' => 'cqu', 'AUR62014825' => 'cqu', 'AUR62015015' => 'cqu', 'AUR62015151' => 'cqu', 'AUR62017020' => 'cqu', 'AUR62019422' => 'cqu', 'AUR62023570' => 'cqu', 'AUR62025571' => 'cqu', 'AUR62029098' => 'cqu', 'AUR62033863' => 'cqu', 'AUR62034296' => 'cqu', 'AUR62040075' => 'cqu', 'BcaB02g07334' => 'bca', 'BcaB02g10575' => 'bca', 'BcaB03g12119' => 'bca', 'BcaB03g12120' => 'bca', 'BcaB03g13945' => 'bca', 'BcaB04g17123' => 'bca', 'BcaB04g17867' => 'bca', 'BcaB04g19839' => 'bca', 'BcaB07g30317' => 'bca', 'BcaB07g32432' => 'bca', 'BcaB07g33362' => 'bca', 'BcaB08g36611' => 'bca', 'BcaC01g00028' => 'bca', 'BcaC01g01356' => 'bca', 'BcaC01g02034' => 'bca', 'BcaC01g06051' => 'bca', 'BcaC03g16839' => 'bca', 'BcaC03g17176' => 'bca', 'BcaC05g26829' => 'bca', 'BcaC06g31490' => 'bca', 'BcaC06g35344' => 'bca', 'BcaC06g36570' => 'bca', 'BcaC07g37537' => 'bca', 'BcaC08g43491' => 'bca', 'BcaC08g43773' => 'bca', 'BcaNung00234' => 'bca', 'BcaNung01982' => 'bca', 'BcaNung03707' => 'bca', 'BcaNung06454' => 'bca', 'BolC2t10762H' => 'bol', 'BolC2t11191H' => 'bol', 'BolC3t14322H' => 'bol', 'BolC3t19747H' => 'bol', 'BolC3t21425H' => 'bol', 'BolC4t27800H' => 'bol', 'BolC5t31423H' => 'bol', 'BolC6t35951H' => 'bol', 'BolC6t36282H' => 'bol', 'BolC7t40678H' => 'bol', 'BolC7t40679H' => 'bol', 'BolC7t42222H' => 'bol', 'BolC7t43492H' => 'bol', 'BolC7t46785H' => 'bol', 'BolC8t47853H' => 'bol', 'BolC9t56805H' => 'bol', 'BraA02t08000Z' => 'bra', 'BraA02t08341Z' => 'bra', 'BraA03t10936Z' => 'bra', 'BraA03t15657Z' => 'bra', 'BraA04t18100Z' => 'bra', 'BraA05t20523Z' => 'bra', 'BraA06t23353Z' => 'bra', 'BraA06t27473Z' => 'bra', 'BraA06t27769Z' => 'bra', 'BraA07t28928Z' => 'bra', 'BraA08t32236Z' => 'bra', 'BraA08t32841Z' => 'bra', 'BraA08t34524Z' => 'bra', 'BraA09t38742Z' => 'bra', 'BraA09t39295Z' => 'bra', 'C02p47180' => 'bna', 'C02p50990' => 'bna', 'C03p19360' => 'bna', 'C03p74950' => 'bna', 'C03p91000' => 'bna', 'C04p63260' => 'bna', 'C05p27050' => 'bna', 'C06p08750' => 'bna', 'C06p11490' => 'bna', 'C07p02820' => 'bna', 'C07p17180' => 'bna', 'C07p29440' => 'bna', 'C07p63730' => 'bna', 'C09p39260' => 'bna', 'CAN.G1164.34' => 'can', 'CAN.G1164.39' => 'can', 'CAN.G1530.3' => 'can', 'CAN.G162.61' => 'can', 'CAN.G176.6' => 'can', 'CAN.G289.49' => 'can', 'CAN.G370.21' => 'can', 'CAN.G370.22' => 'can', 'CAN.G371.117' => 'can', 'CAN.G58.37' => 'can', 'CAN.G588.98' => 'can', 'CANSAT21G2266' => 'cansat', 'CANSAT25G2799' => 'cansat', 'CANSAT35G0862' => 'cansat', 'CANSAT35G1704' => 'cansat', 'CANSAT35G1760' => 'cansat', 'CANSAT56G3971' => 'cansat', 'CANSAT56G4116' => 'cansat', 'CANSAT80G1259' => 'cansat', 'CARHR027730' => 'chi', 'CARHR033880' => 'chi', 'CARHR043270' => 'chi', 'CARHR145330' => 'chi', 'CARHR145340' => 'chi', 'CARHR175570' => 'chi', 'CARHR181570' => 'chi', 'CARHR258470' => 'chi', 'CARHR260490' => 'chi', 'CARHR294220' => 'chi', 'Carub.0001s2668' => 'cru', 'Carub.0001s3257' => 'cru', 'Carub.0001s4220' => 'cru', 'Carub.0005s0179' => 'cru', 'Carub.0006s2807' => 'cru', 'Carub.0007s0039' => 'cru', 'Carub.0008s0169' => 'cru', 'Carub.0008s0636' => 'cru', 'Ca_00338_v3' => 'car', 'Ca_00542_v3' => 'car', 'Ca_01844_v3' => 'car', 'Ca_10611_v3' => 'car', 'Ca_13326_v3' => 'car', 'Ca_17944_v3' => 'car', 'Ca_18546_v3' => 'car', 'Ca_24219_v3' => 'car', 'Ca_29972_v3' => 'car', 'CBR_g3681' => 'cbr', 'CBR_g40021' => 'cbr', 'Cc01_g08140' => 'ccan', 'Cc02_g13410' => 'ccan', 'Cc02_g37480' => 'ccan', 'Cc05_g12030' => 'ccan', 'Cc09_g03370' => 'ccan', 'Cc09_g10300' => 'ccan', 'Cc10_g03530' => 'ccan', 'Cc10_g11380' => 'ccan', 'CDE01G0176' => 'cde', 'CDE02G0675' => 'cde', 'CDE02G0942' => 'cde', 'CDE02G1153' => 'cde', 'CDE02G4177' => 'cde', 'CDE04G2117' => 'cde', 'CDE04G2736' => 'cde', 'CDE08G1161' => 'cde', 'CDE09G1238' => 'cde', 'Cfa000467' => 'cfa', 'Cfa000947' => 'cfa', 'Cfa004969' => 'cfa', 'Cfa005284' => 'cfa', 'Cfa008993' => 'cfa', 'Cfa018187' => 'cfa', 'Cfa018454' => 'cfa', 'Cfa020585' => 'cfa', 'Ciclev10000424m.g' => 'ccl', 'Ciclev10003605m.g' => 'ccl', 'Ciclev10007828m.g' => 'ccl', 'Ciclev10014620m.g' => 'ccl', 'Ciclev10015169m.g' => 'ccl', 'Ciclev10018291m.g' => 'ccl', 'Ciclev10028256m.g' => 'ccl', 'Ciclev10033822m.g' => 'ccl', 'CiPaw.05G060300' => 'cil', 'CiPaw.05G085000' => 'cil', 'CiPaw.06G083700' => 'cil', 'CiPaw.06G120300' => 'cil', 'CiPaw.09G060500' => 'cil', 'CiPaw.09G123800' => 'cil', 'CiPaw.11G169700' => 'cil', 'CiPaw.12G118300' => 'cil', 'CiPaw.15G071000' => 'cil', 'CiPaw.15G081900' => 'cil', 'ClCG01G024610' => 'cla', 'ClCG03G006070' => 'cla', 'ClCG05G019250' => 'cla', 'ClCG09G009500' => 'cla', 'ClCG11G008200' => 'cla', 'ClCG11G018080' => 'cla', 'COL.COLO4_17373' => 'col', 'COL.COLO4_22994' => 'col', 'COL.COLO4_26389' => 'col', 'COL.COLO4_27170' => 'col', 'COL.COLO4_31074' => 'col', 'COL.COLO4_31465' => 'col', 'COL.COLO4_36438' => 'col', 'COL.COLO4_36439' => 'col', 'Cpa.g.c38781' => 'cpa', 'Cpa.g.sc128.12' => 'cpa', 'Cpa.g.sc166.7' => 'cpa', 'Cpa.g.sc166.8' => 'cpa', 'Cpa.g.sc20.111' => 'cpa', 'Cpa.g.sc27.31' => 'cpa', 'Cpa.g.sc64.36' => 'cpa', 'Cpa.g.sc64.37' => 'cpa', 'Cpa.g.sc66.49' => 'cpa', 'Cpa.g.sc80.64' => 'cpa', 'CsaV3_1G012320' => 'csa', 'CsaV3_2G008480' => 'csa', 'CsaV3_2G033450' => 'csa', 'CsaV3_3G044830' => 'csa', 'CsaV3_4G033710' => 'csa', 'CsaV3_6G051730' => 'csa', 'CsaV3_7G025350' => 'csa', 'CSS0001067' => 'camsi', 'CSS0005996' => 'camsi', 'CSS0006590' => 'camsi', 'CSS0009673' => 'camsi', 'CSS0010201' => 'camsi', 'CSS0010549' => 'camsi', 'CSS0011364' => 'camsi', 'CSS0014473' => 'camsi', 'CSS0014961' => 'camsi', 'CSS0020191' => 'camsi', 'CSS0021165' => 'camsi', 'CSS0022306' => 'camsi', 'CSS0030591' => 'camsi', 'CSS0030696' => 'camsi', 'CSS0032653' => 'camsi', 'CSS0037487' => 'camsi', 'CSS0041102' => 'camsi', 'CSS0041261' => 'camsi', 'CSS0046246' => 'camsi', 'CSS0049256' => 'camsi', 'DCAR_004075' => 'dca', 'DCAR_011538' => 'dca', 'DCAR_019553' => 'dca', 'DCAR_020952' => 'dca', 'DCAR_021739' => 'dca', 'DCAR_027407' => 'dca', 'DCAR_027913' => 'dca', 'DCAR_028066' => 'dca', 'Dinv05899' => 'din', 'Dinv07563' => 'din', 'Dinv08010' => 'din', 'Dinv14125' => 'din', 'Dinv20172' => 'din', 'Dinv30743' => 'din', 'Dinv31229' => 'din', 'Dinv34162' => 'din', 'Dinv36028' => 'din', 'Dinv39368' => 'din', 'Dinv40565' => 'din', 'Dinv41706' => 'din', 'Duzib052G0089' => 'dzi', 'Duzib116G0641' => 'dzi', 'Duzib132G0069' => 'dzi', 'Duzib132G1219' => 'dzi', 'Duzib147G0278' => 'dzi', 'Duzib160G0480' => 'dzi', 'Duzib170G0661' => 'dzi', 'Duzib177G0591' => 'dzi', 'Duzib187G1353' => 'dzi', 'Duzib192G0858' => 'dzi', 'Duzib192G0883' => 'dzi', 'Duzib213G0506' => 'dzi', 'Duzib235G0289' => 'dzi', 'Duzib251G0422' => 'dzi', 'ECA232G3898' => 'eca', 'ECA233G5950' => 'eca', 'ECA234G1699' => 'eca', 'ECA234G2421' => 'eca', 'ECA236G0426' => 'eca', 'ECA236G4331' => 'eca', 'ECA248G2573' => 'eca', 'EL10Ac1g00077' => 'bvu', 'EL10Ac1g01746' => 'bvu', 'EL10Ac2g03464' => 'bvu', 'EL10Ac4g08176' => 'bvu', 'EL10Ac7g17521' => 'bvu', 'EL10Ac8g20386' => 'bvu', 'EL10Ac9g21343' => 'bvu', 'EL10Ac9g22688' => 'bvu', 'Eucgr.B03434' => 'egr', 'Eucgr.D00618' => 'egr', 'Eucgr.E02395' => 'egr', 'Eucgr.F01129' => 'egr', 'Eucgr.F02622' => 'egr', 'Eucgr.F04207' => 'egr', 'FAN01G0570' => 'fan', 'FAN03G3351' => 'fan', 'FAN06G3702' => 'fan', 'FAN07G2149' => 'fan', 'FAN10G3758' => 'fan', 'FAN11G1170' => 'fan', 'FAN11G2050' => 'fan', 'FAN11G2724' => 'fan', 'FAN12G1700' => 'fan', 'FAN12G2028' => 'fan', 'FAN15G1160' => 'fan', 'FAN15G3063' => 'fan', 'FAN16G2540' => 'fan', 'FAN16G3077' => 'fan', 'FAN16G3624' => 'fan', 'FAN17G0221' => 'fan', 'FAN20G2492' => 'fan', 'FAN20G2905' => 'fan', 'FAN21G0548' => 'fan', 'FAN21G1300' => 'fan', 'FAN22G0077' => 'fan', 'FAN22G1315' => 'fan', 'FAN24G1280' => 'fan', 'FAN24G1445' => 'fan', 'FAN24G3527' => 'fan', 'FAN25G0464' => 'fan', 'FAN25G2885' => 'fan', 'FAN25G3270' => 'fan', 'FAN27G1101' => 'fan', 'FAN27G2846' => 'fan', 'FAN27G3524' => 'fan', 'FvH4_2g11770' => 'fve', 'FvH4_2g15630' => 'fve', 'FvH4_3g05570' => 'fve', 'FvH4_3g09110' => 'fve', 'FvH4_3g19940' => 'fve', 'FvH4_4g04821' => 'fve', 'FvH4_4g31480' => 'fve', 'FvH4_7g01740' => 'fve', 'Glyma.05G130400' => 'gma', 'Glyma.05G156400' => 'gma', 'Glyma.07G197000' => 'gma', 'Glyma.08G085151' => 'gma', 'Glyma.08G114500' => 'gma', 'Glyma.08G300400' => 'gma', 'Glyma.10G215800' => 'gma', 'Glyma.12G224400' => 'gma', 'Glyma.13G179300' => 'gma', 'Glyma.13G218151' => 'gma', 'Glyma.13G238800' => 'gma', 'Glyma.13G276900' => 'gma', 'Glyma.14G078200' => 'gma', 'Glyma.15G074500' => 'gma', 'Glyma.15G094100' => 'gma', 'Glyma.17G247200' => 'gma', 'Glyma.18G120100' => 'gma', 'Glyma.20G176000' => 'gma', 'Gohir.A01G063600' => 'ghi', 'Gohir.A01G170301' => 'ghi', 'Gohir.A02G060500' => 'ghi', 'Gohir.A05G133850' => 'ghi', 'Gohir.A05G161400' => 'ghi', 'Gohir.A06G012900' => 'ghi', 'Gohir.A06G035901' => 'ghi', 'Gohir.A06G127100' => 'ghi', 'Gohir.A06G210500' => 'ghi', 'Gohir.A08G008650' => 'ghi', 'Gohir.A09G072700' => 'ghi', 'Gohir.A09G088301' => 'ghi', 'Gohir.A10G040600' => 'ghi', 'Gohir.A12G036300' => 'ghi', 'Gohir.A12G143350' => 'ghi', 'Gohir.A12G165500' => 'ghi', 'Gohir.A13G145700' => 'ghi', 'Gohir.D01G050000' => 'ghi', 'Gohir.D01G051366' => 'ghi', 'Gohir.D01G161350' => 'ghi', 'Gohir.D02G065900' => 'ghi', 'Gohir.D05G164200' => 'ghi', 'Gohir.D05G355500' => 'ghi', 'Gohir.D06G010400' => 'ghi', 'Gohir.D06G111250' => 'ghi', 'Gohir.D06G132000' => 'ghi', 'Gohir.D06G210500' => 'ghi', 'Gohir.D07G165675' => 'ghi', 'Gohir.D08G062240' => 'ghi', 'Gohir.D08G086101' => 'ghi', 'Gohir.D08G138060' => 'ghi', 'Gohir.D09G072300' => 'ghi', 'Gohir.D10G041400' => 'ghi', 'Gohir.D11G191020' => 'ghi', 'Gohir.D11G212066' => 'ghi', 'Gohir.D12G036300' => 'ghi', 'Gohir.D12G168600' => 'ghi', 'Gohir.D13G150600' => 'ghi', 'Gorai.001G057300' => 'gra', 'Gorai.002G069900' => 'gra', 'Gorai.002G200000' => 'gra', 'Gorai.003G067600' => 'gra', 'Gorai.005G074800' => 'gra', 'Gorai.006G087300' => 'gra', 'Gorai.008G037500' => 'gra', 'Gorai.008G181400' => 'gra', 'Gorai.009G169400' => 'gra', 'Gorai.009G387900' => 'gra', 'Gorai.010G013300' => 'gra', 'Gorai.010G153800' => 'gra', 'Gorai.010G255800' => 'gra', 'Gorai.011G043700' => 'gra', 'Gorai.011G198900' => 'gra', 'Gorai.013G168400' => 'gra', 'GSVIVG01005212001' => 'vvi', 'GSVIVG01006163001' => 'vvi', 'GSVIVG01009625001' => 'vvi', 'GSVIVG01014338001' => 'vvi', 'GSVIVG01020005001' => 'vvi', 'GSVIVG01021450001' => 'vvi', 'GSVIVG01023975001' => 'vvi', 'GSVIVG01034490001' => 'vvi', 'HanXRQChr04g0112071' => 'han', 'HanXRQChr05g0131151' => 'han', 'HanXRQChr09g0262371' => 'han', 'HanXRQChr09g0268401' => 'han', 'HanXRQChr10g0279241' => 'han', 'HanXRQChr10g0297961' => 'han', 'HanXRQChr11g0326231' => 'han', 'HanXRQChr11g0328471' => 'han', 'HanXRQChr16g0507941' => 'han', 'HanXRQChr17g0560211' => 'han', 'Haze_02108' => 'cav', 'Haze_02428' => 'cav', 'Haze_05593' => 'cav', 'Haze_06448' => 'cav', 'Haze_09427' => 'cav', 'Haze_12022' => 'cav', 'Haze_17612' => 'cav', 'Haze_17928' => 'cav', 'Hma1.2p1_0032F.1_g019250' => 'hma', 'Hma1.2p1_0163F.1_g072690' => 'hma', 'Hma1.2p1_0265F.1_g106710' => 'hma', 'Hma1.2p1_0286F.1_g113970' => 'hma', 'Hma1.2p1_0363F.1_g136640' => 'hma', 'Hma1.2p1_0584F.1_g183470' => 'hma', 'Hma1.2p1_0885F.1_g232570' => 'hma', 'HPP92_006022' => 'vpl', 'HPP92_007320' => 'vpl', 'HPP92_011521' => 'vpl', 'HPP92_019387' => 'vpl', 'HPP92_024038' => 'vpl', 'Hund05891' => 'sun', 'Hund06450' => 'sun', 'Hund12053' => 'sun', 'Hund16800' => 'sun', 'Hund21222' => 'sun', 'Hund22896' => 'sun', 'Hund23746' => 'sun', 'Hund27083' => 'sun', 'Lalb_Chr02g0141831' => 'lal', 'Lalb_Chr02g0141841' => 'lal', 'Lalb_Chr05g0220411' => 'lal', 'Lalb_Chr06g0162081' => 'lal', 'Lalb_Chr09g0327651' => 'lal', 'Lalb_Chr13g0295051' => 'lal', 'Lalb_Chr15g0086801' => 'lal', 'Lalb_Chr16g0383781' => 'lal', 'Lalb_Chr16g0383791' => 'lal', 'Lalb_Chr18g0055441' => 'lal', 'Lalb_Chr18g0059611' => 'lal', 'Lalb_Chr20g0109661' => 'lal', 'Lalb_Chr20g0109831' => 'lal', 'Lalb_Chr20g0121871' => 'lal', 'Lalb_Chr22g0355361' => 'lal', 'Lalb_Chr25g0286371' => 'lal', 'Lj1A1187G43' => 'lonja', 'Lj1A1205T50' => 'lonja', 'Lj1A800G33' => 'lonja', 'Lj1C1187T7' => 'lonja', 'Lj1C843T11' => 'lonja', 'Lj1g0010940' => 'lja', 'Lj2A288T69' => 'lonja', 'Lj3g0024276' => 'lja', 'Lj4A47T76' => 'lonja', 'Lj4g0005805' => 'lja', 'Lj4g0006097' => 'lja', 'Lj4g0008528' => 'lja', 'Lj4g0024907' => 'lja', 'Lj5g0012472' => 'lja', 'Lj5g0018648' => 'lja', 'Lj6C789G1' => 'lonja', 'Lj6g0004000' => 'lja', 'Lj7A292G67' => 'lonja', 'Lj7A292T64' => 'lonja', 'Lj9A400T58' => 'lonja', 'Lsat_1_v5_gn_1_126181' => 'lsa', 'Lsat_1_v5_gn_4_123041' => 'lsa', 'Lsat_1_v5_gn_4_133620' => 'lsa', 'Lsat_1_v5_gn_4_53221' => 'lsa', 'Lsat_1_v5_gn_4_71961' => 'lsa', 'Lsat_1_v5_gn_7_105241' => 'lsa', 'Lsat_1_v5_gn_7_21361' => 'lsa', 'Lsat_1_v5_gn_7_28860' => 'lsa', 'Lsat_1_v5_gn_7_31260' => 'lsa', 'Lsat_1_v5_gn_8_52801' => 'lsa', 'Manes.02G191400' => 'mes', 'Manes.03G110100' => 'mes', 'Manes.04G071100' => 'mes', 'Manes.05G100500' => 'mes', 'Manes.05G164700' => 'mes', 'Manes.15G087000' => 'mes', 'Manes.15G121500' => 'mes', 'Manes.16G028300' => 'mes', 'Manes.17G046100' => 'mes', 'Manes.17G069800' => 'mes', 'Manes.18G100500' => 'mes', 'Mapoly0002s0109' => 'mpo', 'Mapoly0024s0007' => 'mpo', 'Mapoly0089s0032' => 'mpo', 'MBI04_g42241_MAGBIO' => 'mbi', 'MBI05_g11988_MAGBIO' => 'mbi', 'MBI05_g35452_MAGBIO' => 'mbi', 'MBI07_g30179_MAGBIO' => 'mbi', 'MBI07_g35859_MAGBIO' => 'mbi', 'MBI07_g35860_MAGBIO' => 'mbi', 'MBI07_g37166_MAGBIO' => 'mbi', 'MBI08_g18172_MAGBIO' => 'mbi', 'MBI09_g08441_MAGBIO' => 'mbi', 'MBI13_g01676_MAGBIO' => 'mbi', 'MBI14_g42955_MAGBIO' => 'mbi', 'MBI16_g13161_MAGBIO' => 'mbi', 'MBI17_g27204_MAGBIO' => 'mbi', 'MBI19_g21595_MAGBIO' => 'mbi', 'MD00G1148400' => 'mdo', 'MD02G1301200' => 'mdo', 'MD03G1227800' => 'mdo', 'MD05G1041100' => 'mdo', 'MD05G1124800' => 'mdo', 'MD05G1284000' => 'mdo', 'MD05G1338800' => 'mdo', 'MD05G1338900' => 'mdo', 'MD07G1022800' => 'mdo', 'MD10G1047500' => 'mdo', 'MD10G1127500' => 'mdo', 'MD10G1262300' => 'mdo', 'MD10G1293800' => 'mdo', 'MD16G1074300' => 'mdo', 'Medtr1g021670' => 'mtr', 'Medtr1g096320' => 'mtr', 'Medtr2g013690' => 'mtr', 'Medtr2g019450' => 'mtr', 'Medtr2g085170' => 'mtr', 'Medtr4g088785' => 'mtr', 'Medtr8g055930' => 'mtr', 'Medtr8g085850' => 'mtr', 'MELO3C002605.2' => 'cme', 'MELO3C003891.2' => 'cme', 'MELO3C004012.2' => 'cme', 'MELO3C007134.2' => 'cme', 'MELO3C008118.2' => 'cme', 'MELO3C016700.2' => 'cme', 'MELO3C024127.2' => 'cme', 'MELO3C033361.2' => 'cme', 'MELO3C033362.2' => 'cme', 'Migut.C00430' => 'egut', 'Migut.C01246' => 'egut', 'Migut.E00101' => 'egut', 'Migut.H01486' => 'egut', 'Migut.H01939' => 'egut', 'Migut.K00360' => 'egut', 'Migut.M00910' => 'egut', 'Migut.M01139' => 'egut', 'Migut.N02677' => 'egut', 'MSTRG.13252' => 'ama', 'MSTRG.14701' => 'ama', 'MSTRG.1521' => 'ama', 'MSTRG.15884' => 'ama', 'MSTRG.16242' => 'ama', 'MSTRG.22285' => 'ama', 'MSTRG.22444' => 'ama', 'MSTRG.2349' => 'ama', 'MSTRG.26308' => 'ama', 'MSTRG.28296' => 'ama', 'MSTRG.9895' => 'ama', 'Nitab4.5_0000110g0060' => 'nta', 'Nitab4.5_0000420g0130' => 'nta', 'Nitab4.5_0000422g0030' => 'nta', 'Nitab4.5_0000560g0180' => 'nta', 'Nitab4.5_0000703g0100' => 'nta', 'Nitab4.5_0000786g0200' => 'nta', 'Nitab4.5_0001336g0020' => 'nta', 'Nitab4.5_0001796g0030' => 'nta', 'Nitab4.5_0003348g0060' => 'nta', 'Nitab4.5_0003698g0040' => 'nta', 'Nitab4.5_0003942g0090' => 'nta', 'Nitab4.5_0004775g0070' => 'nta', 'Nitab4.5_0004864g0030' => 'nta', 'Nitab4.5_0005615g0020' => 'nta', 'Nitab4.5_0009288g0030' => 'nta', 'Nitab4.5_0009341g0010' => 'nta', 'Nitab4.5_0009535g0010' => 'nta', 'Nn1g03995' => 'nnu', 'Nn1g04100' => 'nnu', 'Nn1g06530' => 'nnu', 'Nn3g16404' => 'nnu', 'Nn3g17212' => 'nnu', 'Nn3g20776' => 'nnu', 'Nn3g21923' => 'nnu', 'Nn5g27737' => 'nnu', 'Nn5g29461' => 'nnu', 'Nn7g38355' => 'nnu', 'Nn8g39873' => 'nnu', 'Oeu000548.2' => 'oeu', 'Oeu004672.1' => 'oeu', 'Oeu015605.2' => 'oeu', 'Oeu016092.1' => 'oeu', 'Oeu017879.3' => 'oeu', 'Oeu024910.1' => 'oeu', 'Oeu028965.1' => 'oeu', 'Oeu031269.1' => 'oeu', 'Oeu031270.1' => 'oeu', 'Oeu032535.1' => 'oeu', 'Oeu034151.1' => 'oeu', 'Oeu034152.1' => 'oeu', 'Oeu034588.2' => 'oeu', 'Oeu050846.1' => 'oeu', 'Oeu050849.2' => 'oeu', 'Oeu051063.2' => 'oeu', 'Oeu052368.1' => 'oeu', 'Oeu052370.1' => 'oeu', 'Os01g0210400' => 'osa', 'Os01g0304300' => 'osa', 'Os01g0749100' => 'osa', 'Os02g0745800' => 'osa', 'Os03g0769050' => 'osa', 'Os05g0531500' => 'osa', 'Os06g0724300' => 'osa', 'Os11g0198100' => 'osa', 'Peaxi162Scf00069g01425' => 'pax', 'Peaxi162Scf00280g00811' => 'pax', 'Peaxi162Scf00310g00615' => 'pax', 'Peaxi162Scf00362g00542' => 'pax', 'Peaxi162Scf00461g00310' => 'pax', 'Peaxi162Scf00530g00118' => 'pax', 'Peaxi162Scf00541g00057' => 'pax', 'Peaxi162Scf00661g00017' => 'pax', 'Peaxi162Scf00926g00027' => 'pax', 'Peaxi162Scf01064g00263' => 'pax', 'Peaxi162Scf01211g00135' => 'pax', 'PGR004G2336' => 'pgr', 'PGR042G0327' => 'pgr', 'PGR042G1957' => 'pgr', 'PGR042G2003' => 'pgr', 'PGR042G3929' => 'pgr', 'PGR083G1137' => 'pgr', 'PGR083G1364' => 'pgr', 'PGSC0003DMG400003381' => 'stu', 'PGSC0003DMG400003417' => 'stu', 'PGSC0003DMG400008981' => 'stu', 'PGSC0003DMG400012417' => 'stu', 'PGSC0003DMG400012823' => 'stu', 'PGSC0003DMG400016885' => 'stu', 'PGSC0003DMG400022812' => 'stu', 'PGSC0003DMG400029726' => 'stu', 'PGSC0003DMG401009243' => 'stu', 'PGSC0003DMG401031505' => 'stu', 'PGSC0003DMG402031505' => 'stu', 'Phvul.001G017600' => 'pvu', 'Phvul.002G193500' => 'pvu', 'Phvul.002G228900' => 'pvu', 'Phvul.002G236800' => 'pvu', 'Phvul.003G049500' => 'pvu', 'Phvul.005G072000' => 'pvu', 'Phvul.006G164800' => 'pvu', 'Phvul.006G185100' => 'pvu', 'Phvul.007G090000' => 'pvu', 'Potri.001G399800' => 'ptr', 'Potri.002G149900' => 'ptr', 'Potri.004G044100' => 'ptr', 'Potri.004G177600' => 'ptr', 'Potri.009G138000' => 'ptr', 'Potri.010G094000' => 'ptr', 'Potri.011G053000' => 'ptr', 'Potri.011G119300' => 'ptr', 'Potri.013G113700' => 'ptr', 'Potri.018G107800' => 'ptr', 'Potri.019G084100' => 'ptr', 'Pp3c14_23720' => 'ppa', 'Pp3c16_6340' => 'ppa', 'Pp3c23_13420' => 'ppa', 'Pp3c24_2740' => 'ppa', 'Pp3c25_860' => 'ppa', 'Pp3c8_21750' => 'ppa', 'Prupe.1G273000' => 'ppe', 'Prupe.1G273700' => 'ppe', 'Prupe.1G274100' => 'ppe', 'Prupe.2G023300' => 'ppe', 'Prupe.4G048000' => 'ppe', 'Prupe.4G080400' => 'ppe', 'Prupe.4G181200' => 'ppe', 'Prupe.8G056900' => 'ppe', 'Prupe.8G168700' => 'ppe', 'Psat1g189080' => 'psa', 'Psat1g204760' => 'psa', 'Psat4g175560' => 'psa', 'Psat4g177720' => 'psa', 'Psat5g244240' => 'psa', 'Psat6g010720' => 'psa', 'Psat6g187200' => 'psa', 'Psat7g072040' => 'psa', 'PSO017G3501' => 'pso', 'PSO063G2148' => 'pso', 'PSO063G5608' => 'pso', 'PSO210G6392' => 'pso', 'PSO541G2319' => 'pso', 'PSO541G2836' => 'pso', 'PSO541G4012' => 'pso', 'PSO541G6253' => 'pso', 'PSO675G0580' => 'pso', 'PSO675G0856' => 'pso', 'PSO675G5635' => 'pso', 'PSO675G9157' => 'pso', 'PSO832G1660' => 'pso', 'PSO832G1969' => 'pso', 'QL02p007186' => 'qlo', 'QL02p033904' => 'qlo', 'QL03p064391' => 'qlo', 'QL05p040593' => 'qlo', 'QL05p058242' => 'qlo', 'QL08p021825' => 'qlo', 'QL11p004981' => 'qlo', 'RcHm_v2.0_Chr1g0318301' => 'rch', 'RcHm_v2.0_Chr4g0418501' => 'rch', 'RcHm_v2.0_Chr4g0439971' => 'rch', 'RcHm_v2.0_Chr5g0008541' => 'rch', 'RcHm_v2.0_Chr5g0014101' => 'rch', 'RcHm_v2.0_Chr5g0014131' => 'rch', 'RcHm_v2.0_Chr5g0033621' => 'rch', 'RcHm_v2.0_Chr6g0272041' => 'rch', 'RcHm_v2.0_Chr6g0278831' => 'rch', 'Rhsim02G0130400' => 'rsi', 'Rhsim02G0171100' => 'rsi', 'Rhsim05G0053000' => 'rsi', 'Rhsim05G0053100' => 'rsi', 'Rhsim06G0096500' => 'rsi', 'Rhsim06G0096600' => 'rsi', 'Rhsim06G0199100' => 'rsi', 'Rhsim12G0062300' => 'rsi', 'Rhsim12G0062800' => 'rsi', 'Sabra02G0118600' => 'sbr', 'Sabra04G0027300' => 'sbr', 'Sabra04G0119500' => 'sbr', 'Sabra08G0112500' => 'sbr', 'Sabra11G0036800' => 'sbr', 'Sabra11G0103800' => 'sbr', 'Sabra13G0096300' => 'sbr', 'Sabra16G0262300' => 'sbr', 'Sabra18G0091700' => 'sbr', 'Sabra19G0095400' => 'sbr', 'SalBow6G3080' => 'sbo', 'SalBow7G1157' => 'sbo', 'SalBow7G2123' => 'sbo', 'SalBow7G2285' => 'sbo', 'SalBow7G3537' => 'sbo', 'SalBow8G2947' => 'sbo', 'SalBow8G4463' => 'sbo', 'SalBow8G5466' => 'sbo', 'Sc01g0001750' => 'sci', 'Sc02g0006640' => 'sci', 'Sc02g0006670' => 'sci', 'Sc04g0008220' => 'sci', 'Sc05g0006190' => 'sci', 'Sc08g0002760' => 'sci', 'Sc17g0006170' => 'sci', 'Sc22g0002050' => 'sci', 'Sc23g0001190' => 'sci', 'Sc24g0000980' => 'sci', 'Sed0006245' => 'sed', 'Sed0007543' => 'sed', 'Sed0009411' => 'sed', 'Sed0010765' => 'sed', 'Sed0012944' => 'sed', 'Sed0014682' => 'sed', 'Sed0016174' => 'sed', 'Sed0016796' => 'sed', 'Sed0020317' => 'sed', 'Sed0021467' => 'sed', 'SEGI_01316' => 'sgi', 'SEGI_03374' => 'sgi', 'SEGI_16265' => 'sgi', 'SEGI_18569' => 'sgi', 'SEGI_20351' => 'sgi', 'SEGI_26395' => 'sgi', 'SEGI_29469' => 'sgi', 'SEGI_34771' => 'sgi', 'SEGI_36769' => 'sgi', 'SEGI_37139' => 'sgi', 'SGA_v2.0_scaffold100G29687' => 'sas', 'SGA_v2.0_scaffold118G32472' => 'sas', 'SGA_v2.0_scaffold14G07051' => 'sas', 'SGA_v2.0_scaffold183G39845' => 'sas', 'SGA_v2.0_scaffold1G00174' => 'sas', 'SGA_v2.0_scaffold22G09714' => 'sas', 'SGA_v2.0_scaffold333G48992' => 'sas', 'SGA_v2.0_scaffold46G17491' => 'sas', 'SGA_v2.0_scaffold49G18294' => 'sas', 'SGA_v2.0_scaffold63G21658' => 'sas', 'SHI01741' => 'shi', 'SHI05771' => 'shi', 'SHI18077' => 'shi', 'SHI20525' => 'shi', 'SHI20527' => 'shi', 'SHI20528' => 'shi', 'SMO172G0185' => 'smo', 'SMO198G0020' => 'smo', 'SMO351G0006' => 'smo', 'SMO356G0118' => 'smo', 'SMO358G0296' => 'smo', 'SMO367G0079' => 'smo', 'SMO367G1277' => 'smo', 'Solyc01g014220.3' => 'sly', 'Solyc01g111770.2' => 'sly', 'Solyc02g078180.3' => 'sly', 'Solyc03g006430.3' => 'sly', 'Solyc03g006456.1' => 'sly', 'Solyc03g079860.2' => 'sly', 'Solyc04g079770.3' => 'sly', 'Solyc05g007430.4' => 'sly', 'Solyc07g063150.3' => 'sly', 'Solyc08g016620.3' => 'sly', 'Solyc09g057590.3' => 'sly', 'Solyc09g057600.1' => 'sly', 'Solyc10g009050.3' => 'sly', 'Solyc11g017420.2' => 'sly', 'Sopen01g053810' => 'spe', 'Sopen02g023040' => 'spe', 'Sopen03g002440' => 'spe', 'Sopen04g033350' => 'spe', 'Sopen05g003310' => 'spe', 'Sopen07g004050' => 'spe', 'Sopen07g031340' => 'spe', 'Sopen08g006990' => 'spe', 'Sopen10g004830' => 'spe', 'Sopen11g009370' => 'spe', 'Sp1g24450' => 'spa', 'Sp1g29670' => 'spa', 'Sp1g39600' => 'spa', 'Sp2g11080' => 'spa', 'Sp2g13970' => 'spa', 'Sp4g16130' => 'spa', 'Sp6g13080' => 'spa', 'Sp7g37270' => 'spa', 'TAR371G0065' => 'tar', 'TAR376G0340' => 'tar', 'TAR376G0435' => 'tar', 'TAR381G0002' => 'tar', 'TAR381G1236' => 'tar', 'TAR624G0055' => 'tar', 'TAR624G0324' => 'tar', 'TAR624G0696' => 'tar', 'TAR624G0906' => 'tar', 'TAR625G0107' => 'tar', 'TAR626G0015' => 'tar', 'TAR626G1356' => 'tar', 'TAR627G0888' => 'tar', 'TAR628G0399' => 'tar', 'TAR628G1327' => 'tar', 'TAR629G2831' => 'tar', 'TAR629G2874' => 'tar', 'TAR633G1432' => 'tar', 'TAR633G2771' => 'tar', 'THA.LOC104803394' => 'tha', 'THA.LOC104805153' => 'tha', 'THA.LOC104806784' => 'tha', 'THA.LOC104810473' => 'tha', 'THA.LOC104813100' => 'tha', 'THA.LOC104814215' => 'tha', 'THA.LOC104815554' => 'tha', 'THA.LOC104820544' => 'tha', 'THA.LOC104824754' => 'tha', 'THA.LOC104827717' => 'tha', 'Thecc.02G031400' => 'tca', 'Thecc.02G055900' => 'tca', 'Thecc.02G350800' => 'tca', 'Thecc.06G150900' => 'tca', 'Thecc.06G186600' => 'tca', 'Thecc.07G089600' => 'tca', 'Thecc.08G020400' => 'tca', 'Thecc.08G182100' => 'tca', 'Thhalv10000873m.g' => 'esa', 'Thhalv10004185m.g' => 'esa', 'Thhalv10006981m.g' => 'esa', 'Thhalv10007204m.g' => 'esa', 'Thhalv10011374m.g' => 'esa', 'Thhalv10013482m.g' => 'esa', 'Thhalv10017801m.g' => 'esa', 'Thhalv10024983m.g' => 'esa', 'TPR.G12072' => 'tpr', 'TPR.G15769' => 'tpr', 'TPR.G16504' => 'tpr', 'TPR.G16506' => 'tpr', 'TPR.G24345' => 'tpr', 'TPR.G26666' => 'tpr', 'TPR.G27320' => 'tpr', 'TPR.G31819' => 'tpr', 'TPR.G38879' => 'tpr', 'TPR.G39015' => 'tpr', 'TPR.G8819' => 'tpr', 'TWI09G0924' => 'twi', 'TWI12G0811' => 'twi', 'TWI12G1294' => 'twi', 'TWI31G0150' => 'twi', 'TWI36G1262' => 'twi', 'TWI38G1287' => 'twi', 'TWI38G1633' => 'twi', 'TWI38G1982' => 'twi', 'TWI39G0116' => 'twi', 'TWI60G1011' => 'twi', 'TWI63G0171' => 'twi', 'TWI73G0839' => 'twi', 'TWI79G1511' => 'twi', 'unitig_0.g915' => 'ugi', 'unitig_0.g916' => 'ugi', 'unitig_21.g20219' => 'ugi', 'unitig_21.g20416' => 'ugi', 'unitig_578.g16132' => 'ugi', 'unitig_578.g16718' => 'ugi', 'unitig_62.g23481' => 'ugi', 'unitig_744.g24535' => 'ugi', 'unitig_749.g13525' => 'ugi', 'vmacro01248' => 'vma', 'vmacro02290' => 'vma', 'vmacro10946' => 'vma', 'vmacro11865' => 'vma', 'vmacro12493' => 'vma', 'vmacro17322' => 'vma', 'vmacro21599' => 'vma', 'vmacro23041' => 'vma', 'VMungo0251G0004' => 'vmu', 'VMungo0251G2639' => 'vmu', 'VMungo0251G2967' => 'vmu', 'VMungo0540G0864' => 'vmu', 'VMungo0540G1569' => 'vmu', 'VMungo0647G0317' => 'vmu', 'VMungo0720G1373' => 'vmu', 'VMungo0720G1508' => 'vmu', 'VMungo1080G0485' => 'vmu', 'VMungo1215G3177' => 'vmu', 'Zm00001eb112600' => 'zma', 'Zm00001eb120220' => 'zma', 'Zm00001eb153240' => 'zma', 'Zm00001eb168880' => 'zma', 'Zm00001eb213920' => 'zma', 'Zm00001eb228280' => 'zma', 'Zm00001eb254580' => 'zma', 'Zm00001eb272180' => 'zma', 'Zm00001eb293190' => 'zma', 'Zm00001eb322930' => 'zma', 'Zm00001eb353360' => 'zma', 'Zm00001eb353390' => 'zma', 'Zm00001eb353430' => 'zma', 'Zm00001eb353440' => 'zma', 'Zm00001eb353780' => 'zma' ), 'gf_id' => 'HOM05D000499', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000499' ), 'data_identifier' => 'HOM05D000499', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000499', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1066', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p29780' => 'bna', 'A02p33180' => 'bna', 'A03p16470' => 'bna', 'A03p66010' => 'bna', 'A04p25970' => 'bna', 'A06p01270' => 'bna', 'A06p46080' => 'bna', 'A07p11400' => 'bna', 'A08p01840' => 'bna', 'A08p08230' => 'bna', 'A08p25740' => 'bna', 'A09p32070' => 'bna', 'A09p37830' => 'bna', 'A09p42840' => 'bna', 'A09p42850' => 'bna', 'Aa31LG10G2060' => 'aar', 'Aa31LG2G7410' => 'aar', 'Aa31LG6G10200' => 'aar', 'Aa31LG6G16680' => 'aar', 'Aa31LG6G8470' => 'aar', 'Aa31LG9G12730' => 'aar', 'Aa31LG9G13680' => 'aar', 'Aa31LG9G14920' => 'aar', 'Aa31LG9G6650' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4977' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5467' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3254' => 'aag', 'Actinidia02578' => 'ach', 'Actinidia07693' => 'ach', 'Actinidia08413' => 'ach', 'Actinidia08414' => 'ach', 'Actinidia15289' => 'ach', 'Actinidia19871' => 'ach', 'Actinidia21475' => 'ach', 'Actinidia22576' => 'ach', 'Actinidia28327' => 'ach', 'Actinidia32491' => 'ach', 'Actinidia39463' => 'ach', 'Actinidia39571' => 'ach', 'Ah.01g013750' => 'amhyb', 'Ah.01g023210' => 'amhyb', 'Ah.04g164850' => 'amhyb', 'Ah.05g178060' => 'amhyb', 'Ah.07g204270' => 'amhyb', 'Ah.07g208480' => 'amhyb', 'Ah.09g237410' => 'amhyb', 'Ah.14g089460' => 'amhyb', 'AL1G41790' => 'aly', 'AL1G49050' => 'aly', 'AL1G53810' => 'aly', 'AL1G61400' => 'aly', 'AL4G18580' => 'aly', 'AL5G12510' => 'aly', 'AL5G12540' => 'aly', 'AL6G43230' => 'aly', 'AL7G10370' => 'aly', 'AL7G19250' => 'aly', 'AL8G12240' => 'aly', 'AL8G18540' => 'aly', 'Aqoxy1G02409' => 'aox', 'Aqoxy2G03993' => 'aox', 'Aqoxy3G03357' => 'aox', 'Aqoxy4G00785' => 'aox', 'Aqoxy5G02598' => 'aox', 'Aqoxy6G00132' => 'aox', 'Aqoxy7G01776' => 'aox', 'Aqoxy7G02316' => 'aox', 'Aqoxy7G03973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.12AFKW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B8730' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27IQR1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3F75VG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3RE0GA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41TCQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.527VTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FIR39' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5W8UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DA38EV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ63HS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H1I32C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HC27T5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4M8AP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7N3CZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9UVDZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LS1NQA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT1D4B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SKC4TM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCFV76' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF9Q1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQWD9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1ZM88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WE07RT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YCK7VH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJE6Q6' => 'arhy', 'AT1G28240' => 'ath', 'AT1G34550' => 'ath', 'AT1G53040' => 'ath', 'AT2G02910' => 'ath', 'AT4G09630' => 'ath', 'AT4G38500' => 'ath', 'AT5G42660' => 'ath', 'AT5G46220' => 'ath', 'ATR0152G026' => 'atr', 'ATR0564G343' => 'atr', 'ATR0706G151' => 'atr', 'ATR0733G207' => 'atr', 'ATR0751G234' => 'atr', 'ATR0807G048' => 'atr', 'ATR1091G084' => 'atr', 'Atru.chr10.1229' => 'acertr', 'Atru.chr10.1230' => 'acertr', 'Atru.chr10.1874' => 'acertr', 'Atru.chr11.1808' => 'acertr', 'Atru.chr13.1795' => 'acertr', 'Atru.chr13.570' => 'acertr', 'Atru.chr2.2608' => 'acertr', 'Atru.chr2.2609' => 'acertr', 'Atru.chr5.3428' => 'acertr', 'Atru.chr8.1171' => 'acertr', 'AUR62004651' => 'cqu', 'AUR62008675' => 'cqu', 'AUR62010014' => 'cqu', 'AUR62013004' => 'cqu', 'AUR62014825' => 'cqu', 'AUR62015015' => 'cqu', 'AUR62015151' => 'cqu', 'AUR62017020' => 'cqu', 'AUR62019422' => 'cqu', 'AUR62023570' => 'cqu', 'AUR62025571' => 'cqu', 'AUR62029098' => 'cqu', 'AUR62033863' => 'cqu', 'AUR62034296' => 'cqu', 'AUR62040075' => 'cqu', 'BcaB02g07334' => 'bca', 'BcaB02g10575' => 'bca', 'BcaB03g12119' => 'bca', 'BcaB03g12120' => 'bca', 'BcaB03g13945' => 'bca', 'BcaB04g17123' => 'bca', 'BcaB04g17867' => 'bca', 'BcaB04g19839' => 'bca', 'BcaB07g30317' => 'bca', 'BcaB07g32432' => 'bca', 'BcaB07g33362' => 'bca', 'BcaB08g36611' => 'bca', 'BcaC01g00028' => 'bca', 'BcaC01g01356' => 'bca', 'BcaC01g02034' => 'bca', 'BcaC01g06051' => 'bca', 'BcaC03g16839' => 'bca', 'BcaC03g17176' => 'bca', 'BcaC05g26829' => 'bca', 'BcaC06g31490' => 'bca', 'BcaC06g35344' => 'bca', 'BcaC06g36570' => 'bca', 'BcaC07g37537' => 'bca', 'BcaC08g43491' => 'bca', 'BcaC08g43773' => 'bca', 'BcaNung00234' => 'bca', 'BcaNung01982' => 'bca', 'BcaNung03707' => 'bca', 'BcaNung06454' => 'bca', 'BolC2t10762H' => 'bol', 'BolC2t11191H' => 'bol', 'BolC3t14322H' => 'bol', 'BolC3t19747H' => 'bol', 'BolC3t21425H' => 'bol', 'BolC4t27800H' => 'bol', 'BolC5t31423H' => 'bol', 'BolC6t35951H' => 'bol', 'BolC6t36282H' => 'bol', 'BolC7t40678H' => 'bol', 'BolC7t40679H' => 'bol', 'BolC7t42222H' => 'bol', 'BolC7t43492H' => 'bol', 'BolC7t46785H' => 'bol', 'BolC8t47853H' => 'bol', 'BolC9t56805H' => 'bol', 'BraA02t08000Z' => 'bra', 'BraA02t08341Z' => 'bra', 'BraA03t10936Z' => 'bra', 'BraA03t15657Z' => 'bra', 'BraA04t18100Z' => 'bra', 'BraA05t20523Z' => 'bra', 'BraA06t23353Z' => 'bra', 'BraA06t27473Z' => 'bra', 'BraA06t27769Z' => 'bra', 'BraA07t28928Z' => 'bra', 'BraA08t32236Z' => 'bra', 'BraA08t32841Z' => 'bra', 'BraA08t34524Z' => 'bra', 'BraA09t38742Z' => 'bra', 'BraA09t39295Z' => 'bra', 'C02p47180' => 'bna', 'C02p50990' => 'bna', 'C03p19360' => 'bna', 'C03p74950' => 'bna', 'C03p91000' => 'bna', 'C04p63260' => 'bna', 'C05p27050' => 'bna', 'C06p08750' => 'bna', 'C06p11490' => 'bna', 'C07p02820' => 'bna', 'C07p17180' => 'bna', 'C07p29440' => 'bna', 'C07p63730' => 'bna', 'C09p39260' => 'bna', 'CAN.G1164.34' => 'can', 'CAN.G1164.39' => 'can', 'CAN.G1530.3' => 'can', 'CAN.G162.61' => 'can', 'CAN.G176.6' => 'can', 'CAN.G289.49' => 'can', 'CAN.G370.21' => 'can', 'CAN.G370.22' => 'can', 'CAN.G371.117' => 'can', 'CAN.G58.37' => 'can', 'CAN.G588.98' => 'can', 'CANSAT21G2266' => 'cansat', 'CANSAT25G2799' => 'cansat', 'CANSAT35G0862' => 'cansat', 'CANSAT35G1704' => 'cansat', 'CANSAT35G1760' => 'cansat', 'CANSAT56G3971' => 'cansat', 'CANSAT56G4116' => 'cansat', 'CANSAT80G1259' => 'cansat', 'CARHR027730' => 'chi', 'CARHR033880' => 'chi', 'CARHR043270' => 'chi', 'CARHR145330' => 'chi', 'CARHR145340' => 'chi', 'CARHR175570' => 'chi', 'CARHR181570' => 'chi', 'CARHR258470' => 'chi', 'CARHR260490' => 'chi', 'CARHR294220' => 'chi', 'Carub.0001s2668' => 'cru', 'Carub.0001s3257' => 'cru', 'Carub.0001s4220' => 'cru', 'Carub.0005s0179' => 'cru', 'Carub.0006s2807' => 'cru', 'Carub.0007s0039' => 'cru', 'Carub.0008s0169' => 'cru', 'Carub.0008s0636' => 'cru', 'Ca_00338_v3' => 'car', 'Ca_00542_v3' => 'car', 'Ca_01844_v3' => 'car', 'Ca_10611_v3' => 'car', 'Ca_13326_v3' => 'car', 'Ca_17944_v3' => 'car', 'Ca_18546_v3' => 'car', 'Ca_24219_v3' => 'car', 'Ca_29972_v3' => 'car', 'CBR_g3681' => 'cbr', 'CBR_g40021' => 'cbr', 'Cc01_g08140' => 'ccan', 'Cc02_g13410' => 'ccan', 'Cc02_g37480' => 'ccan', 'Cc05_g12030' => 'ccan', 'Cc09_g03370' => 'ccan', 'Cc09_g10300' => 'ccan', 'Cc10_g03530' => 'ccan', 'Cc10_g11380' => 'ccan', 'CDE01G0176' => 'cde', 'CDE02G0675' => 'cde', 'CDE02G0942' => 'cde', 'CDE02G1153' => 'cde', 'CDE02G4177' => 'cde', 'CDE04G2117' => 'cde', 'CDE04G2736' => 'cde', 'CDE08G1161' => 'cde', 'CDE09G1238' => 'cde', 'Cfa000467' => 'cfa', 'Cfa000947' => 'cfa', 'Cfa004969' => 'cfa', 'Cfa005284' => 'cfa', 'Cfa008993' => 'cfa', 'Cfa018187' => 'cfa', 'Cfa018454' => 'cfa', 'Cfa020585' => 'cfa', 'Ciclev10000424m.g' => 'ccl', 'Ciclev10003605m.g' => 'ccl', 'Ciclev10007828m.g' => 'ccl', 'Ciclev10014620m.g' => 'ccl', 'Ciclev10015169m.g' => 'ccl', 'Ciclev10018291m.g' => 'ccl', 'Ciclev10028256m.g' => 'ccl', 'Ciclev10033822m.g' => 'ccl', 'CiPaw.05G060300' => 'cil', 'CiPaw.05G085000' => 'cil', 'CiPaw.06G083700' => 'cil', 'CiPaw.06G120300' => 'cil', 'CiPaw.09G060500' => 'cil', 'CiPaw.09G123800' => 'cil', 'CiPaw.11G169700' => 'cil', 'CiPaw.12G118300' => 'cil', 'CiPaw.15G071000' => 'cil', 'CiPaw.15G081900' => 'cil', 'ClCG01G024610' => 'cla', 'ClCG03G006070' => 'cla', 'ClCG05G019250' => 'cla', 'ClCG09G009500' => 'cla', 'ClCG11G008200' => 'cla', 'ClCG11G018080' => 'cla', 'COL.COLO4_17373' => 'col', 'COL.COLO4_22994' => 'col', 'COL.COLO4_26389' => 'col', 'COL.COLO4_27170' => 'col', 'COL.COLO4_31074' => 'col', 'COL.COLO4_31465' => 'col', 'COL.COLO4_36438' => 'col', 'COL.COLO4_36439' => 'col', 'Cpa.g.c38781' => 'cpa', 'Cpa.g.sc128.12' => 'cpa', 'Cpa.g.sc166.7' => 'cpa', 'Cpa.g.sc166.8' => 'cpa', 'Cpa.g.sc20.111' => 'cpa', 'Cpa.g.sc27.31' => 'cpa', 'Cpa.g.sc64.36' => 'cpa', 'Cpa.g.sc64.37' => 'cpa', 'Cpa.g.sc66.49' => 'cpa', 'Cpa.g.sc80.64' => 'cpa', 'CsaV3_1G012320' => 'csa', 'CsaV3_2G008480' => 'csa', 'CsaV3_2G033450' => 'csa', 'CsaV3_3G044830' => 'csa', 'CsaV3_4G033710' => 'csa', 'CsaV3_6G051730' => 'csa', 'CsaV3_7G025350' => 'csa', 'CSS0001067' => 'camsi', 'CSS0005996' => 'camsi', 'CSS0006590' => 'camsi', 'CSS0009673' => 'camsi', 'CSS0010201' => 'camsi', 'CSS0010549' => 'camsi', 'CSS0011364' => 'camsi', 'CSS0014473' => 'camsi', 'CSS0014961' => 'camsi', 'CSS0020191' => 'camsi', 'CSS0021165' => 'camsi', 'CSS0022306' => 'camsi', 'CSS0030591' => 'camsi', 'CSS0030696' => 'camsi', 'CSS0032653' => 'camsi', 'CSS0037487' => 'camsi', 'CSS0041102' => 'camsi', 'CSS0041261' => 'camsi', 'CSS0046246' => 'camsi', 'CSS0049256' => 'camsi', 'DCAR_004075' => 'dca', 'DCAR_011538' => 'dca', 'DCAR_019553' => 'dca', 'DCAR_020952' => 'dca', 'DCAR_021739' => 'dca', 'DCAR_027407' => 'dca', 'DCAR_027913' => 'dca', 'DCAR_028066' => 'dca', 'Dinv05899' => 'din', 'Dinv07563' => 'din', 'Dinv08010' => 'din', 'Dinv14125' => 'din', 'Dinv20172' => 'din', 'Dinv30743' => 'din', 'Dinv31229' => 'din', 'Dinv34162' => 'din', 'Dinv36028' => 'din', 'Dinv39368' => 'din', 'Dinv40565' => 'din', 'Dinv41706' => 'din', 'Duzib052G0089' => 'dzi', 'Duzib116G0641' => 'dzi', 'Duzib132G0069' => 'dzi', 'Duzib132G1219' => 'dzi', 'Duzib147G0278' => 'dzi', 'Duzib160G0480' => 'dzi', 'Duzib170G0661' => 'dzi', 'Duzib177G0591' => 'dzi', 'Duzib187G1353' => 'dzi', 'Duzib192G0858' => 'dzi', 'Duzib192G0883' => 'dzi', 'Duzib213G0506' => 'dzi', 'Duzib235G0289' => 'dzi', 'Duzib251G0422' => 'dzi', 'ECA232G3898' => 'eca', 'ECA233G5950' => 'eca', 'ECA234G1699' => 'eca', 'ECA234G2421' => 'eca', 'ECA236G0426' => 'eca', 'ECA236G4331' => 'eca', 'ECA248G2573' => 'eca', 'EL10Ac1g00077' => 'bvu', 'EL10Ac1g01746' => 'bvu', 'EL10Ac2g03464' => 'bvu', 'EL10Ac4g08176' => 'bvu', 'EL10Ac7g17521' => 'bvu', 'EL10Ac8g20386' => 'bvu', 'EL10Ac9g21343' => 'bvu', 'EL10Ac9g22688' => 'bvu', 'Eucgr.B03434' => 'egr', 'Eucgr.D00618' => 'egr', 'Eucgr.E02395' => 'egr', 'Eucgr.F01129' => 'egr', 'Eucgr.F02622' => 'egr', 'Eucgr.F04207' => 'egr', 'FAN01G0570' => 'fan', 'FAN03G3351' => 'fan', 'FAN06G3702' => 'fan', 'FAN07G2149' => 'fan', 'FAN10G3758' => 'fan', 'FAN11G1170' => 'fan', 'FAN11G2050' => 'fan', 'FAN11G2724' => 'fan', 'FAN12G1700' => 'fan', 'FAN12G2028' => 'fan', 'FAN15G1160' => 'fan', 'FAN15G3063' => 'fan', 'FAN16G2540' => 'fan', 'FAN16G3077' => 'fan', 'FAN16G3624' => 'fan', 'FAN17G0221' => 'fan', 'FAN20G2492' => 'fan', 'FAN20G2905' => 'fan', 'FAN21G0548' => 'fan', 'FAN21G1300' => 'fan', 'FAN22G0077' => 'fan', 'FAN22G1315' => 'fan', 'FAN24G1280' => 'fan', 'FAN24G1445' => 'fan', 'FAN24G3527' => 'fan', 'FAN25G0464' => 'fan', 'FAN25G2885' => 'fan', 'FAN25G3270' => 'fan', 'FAN27G1101' => 'fan', 'FAN27G2846' => 'fan', 'FAN27G3524' => 'fan', 'FvH4_2g11770' => 'fve', 'FvH4_2g15630' => 'fve', 'FvH4_3g05570' => 'fve', 'FvH4_3g09110' => 'fve', 'FvH4_3g19940' => 'fve', 'FvH4_4g04821' => 'fve', 'FvH4_4g31480' => 'fve', 'FvH4_7g01740' => 'fve', 'Glyma.05G130400' => 'gma', 'Glyma.05G156400' => 'gma', 'Glyma.07G197000' => 'gma', 'Glyma.08G085151' => 'gma', 'Glyma.08G114500' => 'gma', 'Glyma.08G300400' => 'gma', 'Glyma.10G215800' => 'gma', 'Glyma.12G224400' => 'gma', 'Glyma.13G179300' => 'gma', 'Glyma.13G218151' => 'gma', 'Glyma.13G238800' => 'gma', 'Glyma.13G276900' => 'gma', 'Glyma.14G078200' => 'gma', 'Glyma.15G074500' => 'gma', 'Glyma.15G094100' => 'gma', 'Glyma.17G247200' => 'gma', 'Glyma.18G120100' => 'gma', 'Glyma.20G176000' => 'gma', 'Gohir.A01G063600' => 'ghi', 'Gohir.A01G170301' => 'ghi', 'Gohir.A02G060500' => 'ghi', 'Gohir.A05G133850' => 'ghi', 'Gohir.A05G161400' => 'ghi', 'Gohir.A06G012900' => 'ghi', 'Gohir.A06G035901' => 'ghi', 'Gohir.A06G127100' => 'ghi', 'Gohir.A06G210500' => 'ghi', 'Gohir.A08G008650' => 'ghi', 'Gohir.A09G072700' => 'ghi', 'Gohir.A09G088301' => 'ghi', 'Gohir.A10G040600' => 'ghi', 'Gohir.A12G036300' => 'ghi', 'Gohir.A12G143350' => 'ghi', 'Gohir.A12G165500' => 'ghi', 'Gohir.A13G145700' => 'ghi', 'Gohir.D01G050000' => 'ghi', 'Gohir.D01G051366' => 'ghi', 'Gohir.D01G161350' => 'ghi', 'Gohir.D02G065900' => 'ghi', 'Gohir.D05G164200' => 'ghi', 'Gohir.D05G355500' => 'ghi', 'Gohir.D06G010400' => 'ghi', 'Gohir.D06G111250' => 'ghi', 'Gohir.D06G132000' => 'ghi', 'Gohir.D06G210500' => 'ghi', 'Gohir.D07G165675' => 'ghi', 'Gohir.D08G062240' => 'ghi', 'Gohir.D08G086101' => 'ghi', 'Gohir.D08G138060' => 'ghi', 'Gohir.D09G072300' => 'ghi', 'Gohir.D10G041400' => 'ghi', 'Gohir.D11G191020' => 'ghi', 'Gohir.D11G212066' => 'ghi', 'Gohir.D12G036300' => 'ghi', 'Gohir.D12G168600' => 'ghi', 'Gohir.D13G150600' => 'ghi', 'Gorai.001G057300' => 'gra', 'Gorai.002G069900' => 'gra', 'Gorai.002G200000' => 'gra', 'Gorai.003G067600' => 'gra', 'Gorai.005G074800' => 'gra', 'Gorai.006G087300' => 'gra', 'Gorai.008G037500' => 'gra', 'Gorai.008G181400' => 'gra', 'Gorai.009G169400' => 'gra', 'Gorai.009G387900' => 'gra', 'Gorai.010G013300' => 'gra', 'Gorai.010G153800' => 'gra', 'Gorai.010G255800' => 'gra', 'Gorai.011G043700' => 'gra', 'Gorai.011G198900' => 'gra', 'Gorai.013G168400' => 'gra', 'GSVIVG01005212001' => 'vvi', 'GSVIVG01006163001' => 'vvi', 'GSVIVG01009625001' => 'vvi', 'GSVIVG01014338001' => 'vvi', 'GSVIVG01020005001' => 'vvi', 'GSVIVG01021450001' => 'vvi', 'GSVIVG01023975001' => 'vvi', 'GSVIVG01034490001' => 'vvi', 'HanXRQChr04g0112071' => 'han', 'HanXRQChr05g0131151' => 'han', 'HanXRQChr09g0262371' => 'han', 'HanXRQChr09g0268401' => 'han', 'HanXRQChr10g0279241' => 'han', 'HanXRQChr10g0297961' => 'han', 'HanXRQChr11g0326231' => 'han', 'HanXRQChr11g0328471' => 'han', 'HanXRQChr16g0507941' => 'han', 'HanXRQChr17g0560211' => 'han', 'Haze_02108' => 'cav', 'Haze_02428' => 'cav', 'Haze_05593' => 'cav', 'Haze_06448' => 'cav', 'Haze_09427' => 'cav', 'Haze_12022' => 'cav', 'Haze_17612' => 'cav', 'Haze_17928' => 'cav', 'Hma1.2p1_0032F.1_g019250' => 'hma', 'Hma1.2p1_0163F.1_g072690' => 'hma', 'Hma1.2p1_0265F.1_g106710' => 'hma', 'Hma1.2p1_0286F.1_g113970' => 'hma', 'Hma1.2p1_0363F.1_g136640' => 'hma', 'Hma1.2p1_0584F.1_g183470' => 'hma', 'Hma1.2p1_0885F.1_g232570' => 'hma', 'HPP92_006022' => 'vpl', 'HPP92_007320' => 'vpl', 'HPP92_011521' => 'vpl', 'HPP92_019387' => 'vpl', 'HPP92_024038' => 'vpl', 'Hund05891' => 'sun', 'Hund06450' => 'sun', 'Hund12053' => 'sun', 'Hund16800' => 'sun', 'Hund21222' => 'sun', 'Hund22896' => 'sun', 'Hund23746' => 'sun', 'Hund27083' => 'sun', 'Lalb_Chr02g0141831' => 'lal', 'Lalb_Chr02g0141841' => 'lal', 'Lalb_Chr05g0220411' => 'lal', 'Lalb_Chr06g0162081' => 'lal', 'Lalb_Chr09g0327651' => 'lal', 'Lalb_Chr13g0295051' => 'lal', 'Lalb_Chr15g0086801' => 'lal', 'Lalb_Chr16g0383781' => 'lal', 'Lalb_Chr16g0383791' => 'lal', 'Lalb_Chr18g0055441' => 'lal', 'Lalb_Chr18g0059611' => 'lal', 'Lalb_Chr20g0109661' => 'lal', 'Lalb_Chr20g0109831' => 'lal', 'Lalb_Chr20g0121871' => 'lal', 'Lalb_Chr22g0355361' => 'lal', 'Lalb_Chr25g0286371' => 'lal', 'Lj1A1187G43' => 'lonja', 'Lj1A1205T50' => 'lonja', 'Lj1A800G33' => 'lonja', 'Lj1C1187T7' => 'lonja', 'Lj1C843T11' => 'lonja', 'Lj1g0010940' => 'lja', 'Lj2A288T69' => 'lonja', 'Lj3g0024276' => 'lja', 'Lj4A47T76' => 'lonja', 'Lj4g0005805' => 'lja', 'Lj4g0006097' => 'lja', 'Lj4g0008528' => 'lja', 'Lj4g0024907' => 'lja', 'Lj5g0012472' => 'lja', 'Lj5g0018648' => 'lja', 'Lj6C789G1' => 'lonja', 'Lj6g0004000' => 'lja', 'Lj7A292G67' => 'lonja', 'Lj7A292T64' => 'lonja', 'Lj9A400T58' => 'lonja', 'Lsat_1_v5_gn_1_126181' => 'lsa', 'Lsat_1_v5_gn_4_123041' => 'lsa', 'Lsat_1_v5_gn_4_133620' => 'lsa', 'Lsat_1_v5_gn_4_53221' => 'lsa', 'Lsat_1_v5_gn_4_71961' => 'lsa', 'Lsat_1_v5_gn_7_105241' => 'lsa', 'Lsat_1_v5_gn_7_21361' => 'lsa', 'Lsat_1_v5_gn_7_28860' => 'lsa', 'Lsat_1_v5_gn_7_31260' => 'lsa', 'Lsat_1_v5_gn_8_52801' => 'lsa', 'Manes.02G191400' => 'mes', 'Manes.03G110100' => 'mes', 'Manes.04G071100' => 'mes', 'Manes.05G100500' => 'mes', 'Manes.05G164700' => 'mes', 'Manes.15G087000' => 'mes', 'Manes.15G121500' => 'mes', 'Manes.16G028300' => 'mes', 'Manes.17G046100' => 'mes', 'Manes.17G069800' => 'mes', 'Manes.18G100500' => 'mes', 'Mapoly0002s0109' => 'mpo', 'Mapoly0024s0007' => 'mpo', 'Mapoly0089s0032' => 'mpo', 'MBI04_g42241_MAGBIO' => 'mbi', 'MBI05_g11988_MAGBIO' => 'mbi', 'MBI05_g35452_MAGBIO' => 'mbi', 'MBI07_g30179_MAGBIO' => 'mbi', 'MBI07_g35859_MAGBIO' => 'mbi', 'MBI07_g35860_MAGBIO' => 'mbi', 'MBI07_g37166_MAGBIO' => 'mbi', 'MBI08_g18172_MAGBIO' => 'mbi', 'MBI09_g08441_MAGBIO' => 'mbi', 'MBI13_g01676_MAGBIO' => 'mbi', 'MBI14_g42955_MAGBIO' => 'mbi', 'MBI16_g13161_MAGBIO' => 'mbi', 'MBI17_g27204_MAGBIO' => 'mbi', 'MBI19_g21595_MAGBIO' => 'mbi', 'MD00G1148400' => 'mdo', 'MD02G1301200' => 'mdo', 'MD03G1227800' => 'mdo', 'MD05G1041100' => 'mdo', 'MD05G1124800' => 'mdo', 'MD05G1284000' => 'mdo', 'MD05G1338800' => 'mdo', 'MD05G1338900' => 'mdo', 'MD07G1022800' => 'mdo', 'MD10G1047500' => 'mdo', 'MD10G1127500' => 'mdo', 'MD10G1262300' => 'mdo', 'MD10G1293800' => 'mdo', 'MD16G1074300' => 'mdo', 'Medtr1g021670' => 'mtr', 'Medtr1g096320' => 'mtr', 'Medtr2g013690' => 'mtr', 'Medtr2g019450' => 'mtr', 'Medtr2g085170' => 'mtr', 'Medtr4g088785' => 'mtr', 'Medtr8g055930' => 'mtr', 'Medtr8g085850' => 'mtr', 'MELO3C002605.2' => 'cme', 'MELO3C003891.2' => 'cme', 'MELO3C004012.2' => 'cme', 'MELO3C007134.2' => 'cme', 'MELO3C008118.2' => 'cme', 'MELO3C016700.2' => 'cme', 'MELO3C024127.2' => 'cme', 'MELO3C033361.2' => 'cme', 'MELO3C033362.2' => 'cme', 'Migut.C00430' => 'egut', 'Migut.C01246' => 'egut', 'Migut.E00101' => 'egut', 'Migut.H01486' => 'egut', 'Migut.H01939' => 'egut', 'Migut.K00360' => 'egut', 'Migut.M00910' => 'egut', 'Migut.M01139' => 'egut', 'Migut.N02677' => 'egut', 'MSTRG.13252' => 'ama', 'MSTRG.14701' => 'ama', 'MSTRG.1521' => 'ama', 'MSTRG.15884' => 'ama', 'MSTRG.16242' => 'ama', 'MSTRG.22285' => 'ama', 'MSTRG.22444' => 'ama', 'MSTRG.2349' => 'ama', 'MSTRG.26308' => 'ama', 'MSTRG.28296' => 'ama', 'MSTRG.9895' => 'ama', 'Nitab4.5_0000110g0060' => 'nta', 'Nitab4.5_0000420g0130' => 'nta', 'Nitab4.5_0000422g0030' => 'nta', 'Nitab4.5_0000560g0180' => 'nta', 'Nitab4.5_0000703g0100' => 'nta', 'Nitab4.5_0000786g0200' => 'nta', 'Nitab4.5_0001336g0020' => 'nta', 'Nitab4.5_0001796g0030' => 'nta', 'Nitab4.5_0003348g0060' => 'nta', 'Nitab4.5_0003698g0040' => 'nta', 'Nitab4.5_0003942g0090' => 'nta', 'Nitab4.5_0004775g0070' => 'nta', 'Nitab4.5_0004864g0030' => 'nta', 'Nitab4.5_0005615g0020' => 'nta', 'Nitab4.5_0009288g0030' => 'nta', 'Nitab4.5_0009341g0010' => 'nta', 'Nitab4.5_0009535g0010' => 'nta', 'Nn1g03995' => 'nnu', 'Nn1g04100' => 'nnu', 'Nn1g06530' => 'nnu', 'Nn3g16404' => 'nnu', 'Nn3g17212' => 'nnu', 'Nn3g20776' => 'nnu', 'Nn3g21923' => 'nnu', 'Nn5g27737' => 'nnu', 'Nn5g29461' => 'nnu', 'Nn7g38355' => 'nnu', 'Nn8g39873' => 'nnu', 'Oeu000548.2' => 'oeu', 'Oeu004672.1' => 'oeu', 'Oeu015605.2' => 'oeu', 'Oeu016092.1' => 'oeu', 'Oeu017879.3' => 'oeu', 'Oeu024910.1' => 'oeu', 'Oeu028965.1' => 'oeu', 'Oeu031269.1' => 'oeu', 'Oeu031270.1' => 'oeu', 'Oeu032535.1' => 'oeu', 'Oeu034151.1' => 'oeu', 'Oeu034152.1' => 'oeu', 'Oeu034588.2' => 'oeu', 'Oeu050846.1' => 'oeu', 'Oeu050849.2' => 'oeu', 'Oeu051063.2' => 'oeu', 'Oeu052368.1' => 'oeu', 'Oeu052370.1' => 'oeu', 'Os01g0210400' => 'osa', 'Os01g0304300' => 'osa', 'Os01g0749100' => 'osa', 'Os02g0745800' => 'osa', 'Os03g0769050' => 'osa', 'Os05g0531500' => 'osa', 'Os06g0724300' => 'osa', 'Os11g0198100' => 'osa', 'Peaxi162Scf00069g01425' => 'pax', 'Peaxi162Scf00280g00811' => 'pax', 'Peaxi162Scf00310g00615' => 'pax', 'Peaxi162Scf00362g00542' => 'pax', 'Peaxi162Scf00461g00310' => 'pax', 'Peaxi162Scf00530g00118' => 'pax', 'Peaxi162Scf00541g00057' => 'pax', 'Peaxi162Scf00661g00017' => 'pax', 'Peaxi162Scf00926g00027' => 'pax', 'Peaxi162Scf01064g00263' => 'pax', 'Peaxi162Scf01211g00135' => 'pax', 'PGR004G2336' => 'pgr', 'PGR042G0327' => 'pgr', 'PGR042G1957' => 'pgr', 'PGR042G2003' => 'pgr', 'PGR042G3929' => 'pgr', 'PGR083G1137' => 'pgr', 'PGR083G1364' => 'pgr', 'PGSC0003DMG400003381' => 'stu', 'PGSC0003DMG400003417' => 'stu', 'PGSC0003DMG400008981' => 'stu', 'PGSC0003DMG400012417' => 'stu', 'PGSC0003DMG400012823' => 'stu', 'PGSC0003DMG400016885' => 'stu', 'PGSC0003DMG400022812' => 'stu', 'PGSC0003DMG400029726' => 'stu', 'PGSC0003DMG401009243' => 'stu', 'PGSC0003DMG401031505' => 'stu', 'PGSC0003DMG402031505' => 'stu', 'Phvul.001G017600' => 'pvu', 'Phvul.002G193500' => 'pvu', 'Phvul.002G228900' => 'pvu', 'Phvul.002G236800' => 'pvu', 'Phvul.003G049500' => 'pvu', 'Phvul.005G072000' => 'pvu', 'Phvul.006G164800' => 'pvu', 'Phvul.006G185100' => 'pvu', 'Phvul.007G090000' => 'pvu', 'Potri.001G399800' => 'ptr', 'Potri.002G149900' => 'ptr', 'Potri.004G044100' => 'ptr', 'Potri.004G177600' => 'ptr', 'Potri.009G138000' => 'ptr', 'Potri.010G094000' => 'ptr', 'Potri.011G053000' => 'ptr', 'Potri.011G119300' => 'ptr', 'Potri.013G113700' => 'ptr', 'Potri.018G107800' => 'ptr', 'Potri.019G084100' => 'ptr', 'Pp3c14_23720' => 'ppa', 'Pp3c16_6340' => 'ppa', 'Pp3c23_13420' => 'ppa', 'Pp3c24_2740' => 'ppa', 'Pp3c25_860' => 'ppa', 'Pp3c8_21750' => 'ppa', 'Prupe.1G273000' => 'ppe', 'Prupe.1G273700' => 'ppe', 'Prupe.1G274100' => 'ppe', 'Prupe.2G023300' => 'ppe', 'Prupe.4G048000' => 'ppe', 'Prupe.4G080400' => 'ppe', 'Prupe.4G181200' => 'ppe', 'Prupe.8G056900' => 'ppe', 'Prupe.8G168700' => 'ppe', 'Psat1g189080' => 'psa', 'Psat1g204760' => 'psa', 'Psat4g175560' => 'psa', 'Psat4g177720' => 'psa', 'Psat5g244240' => 'psa', 'Psat6g010720' => 'psa', 'Psat6g187200' => 'psa', 'Psat7g072040' => 'psa', 'PSO017G3501' => 'pso', 'PSO063G2148' => 'pso', 'PSO063G5608' => 'pso', 'PSO210G6392' => 'pso', 'PSO541G2319' => 'pso', 'PSO541G2836' => 'pso', 'PSO541G4012' => 'pso', 'PSO541G6253' => 'pso', 'PSO675G0580' => 'pso', 'PSO675G0856' => 'pso', 'PSO675G5635' => 'pso', 'PSO675G9157' => 'pso', 'PSO832G1660' => 'pso', 'PSO832G1969' => 'pso', 'QL02p007186' => 'qlo', 'QL02p033904' => 'qlo', 'QL03p064391' => 'qlo', 'QL05p040593' => 'qlo', 'QL05p058242' => 'qlo', 'QL08p021825' => 'qlo', 'QL11p004981' => 'qlo', 'RcHm_v2.0_Chr1g0318301' => 'rch', 'RcHm_v2.0_Chr4g0418501' => 'rch', 'RcHm_v2.0_Chr4g0439971' => 'rch', 'RcHm_v2.0_Chr5g0008541' => 'rch', 'RcHm_v2.0_Chr5g0014101' => 'rch', 'RcHm_v2.0_Chr5g0014131' => 'rch', 'RcHm_v2.0_Chr5g0033621' => 'rch', 'RcHm_v2.0_Chr6g0272041' => 'rch', 'RcHm_v2.0_Chr6g0278831' => 'rch', 'Rhsim02G0130400' => 'rsi', 'Rhsim02G0171100' => 'rsi', 'Rhsim05G0053000' => 'rsi', 'Rhsim05G0053100' => 'rsi', 'Rhsim06G0096500' => 'rsi', 'Rhsim06G0096600' => 'rsi', 'Rhsim06G0199100' => 'rsi', 'Rhsim12G0062300' => 'rsi', 'Rhsim12G0062800' => 'rsi', 'Sabra02G0118600' => 'sbr', 'Sabra04G0027300' => 'sbr', 'Sabra04G0119500' => 'sbr', 'Sabra08G0112500' => 'sbr', 'Sabra11G0036800' => 'sbr', 'Sabra11G0103800' => 'sbr', 'Sabra13G0096300' => 'sbr', 'Sabra16G0262300' => 'sbr', 'Sabra18G0091700' => 'sbr', 'Sabra19G0095400' => 'sbr', 'SalBow6G3080' => 'sbo', 'SalBow7G1157' => 'sbo', 'SalBow7G2123' => 'sbo', 'SalBow7G2285' => 'sbo', 'SalBow7G3537' => 'sbo', 'SalBow8G2947' => 'sbo', 'SalBow8G4463' => 'sbo', 'SalBow8G5466' => 'sbo', 'Sc01g0001750' => 'sci', 'Sc02g0006640' => 'sci', 'Sc02g0006670' => 'sci', 'Sc04g0008220' => 'sci', 'Sc05g0006190' => 'sci', 'Sc08g0002760' => 'sci', 'Sc17g0006170' => 'sci', 'Sc22g0002050' => 'sci', 'Sc23g0001190' => 'sci', 'Sc24g0000980' => 'sci', 'Sed0006245' => 'sed', 'Sed0007543' => 'sed', 'Sed0009411' => 'sed', 'Sed0010765' => 'sed', 'Sed0012944' => 'sed', 'Sed0014682' => 'sed', 'Sed0016174' => 'sed', 'Sed0016796' => 'sed', 'Sed0020317' => 'sed', 'Sed0021467' => 'sed', 'SEGI_01316' => 'sgi', 'SEGI_03374' => 'sgi', 'SEGI_16265' => 'sgi', 'SEGI_18569' => 'sgi', 'SEGI_20351' => 'sgi', 'SEGI_26395' => 'sgi', 'SEGI_29469' => 'sgi', 'SEGI_34771' => 'sgi', 'SEGI_36769' => 'sgi', 'SEGI_37139' => 'sgi', 'SGA_v2.0_scaffold100G29687' => 'sas', 'SGA_v2.0_scaffold118G32472' => 'sas', 'SGA_v2.0_scaffold14G07051' => 'sas', 'SGA_v2.0_scaffold183G39845' => 'sas', 'SGA_v2.0_scaffold1G00174' => 'sas', 'SGA_v2.0_scaffold22G09714' => 'sas', 'SGA_v2.0_scaffold333G48992' => 'sas', 'SGA_v2.0_scaffold46G17491' => 'sas', 'SGA_v2.0_scaffold49G18294' => 'sas', 'SGA_v2.0_scaffold63G21658' => 'sas', 'SHI01741' => 'shi', 'SHI05771' => 'shi', 'SHI18077' => 'shi', 'SHI20525' => 'shi', 'SHI20527' => 'shi', 'SHI20528' => 'shi', 'SMO172G0185' => 'smo', 'SMO198G0020' => 'smo', 'SMO351G0006' => 'smo', 'SMO356G0118' => 'smo', 'SMO358G0296' => 'smo', 'SMO367G0079' => 'smo', 'SMO367G1277' => 'smo', 'Solyc01g014220.3' => 'sly', 'Solyc01g111770.2' => 'sly', 'Solyc02g078180.3' => 'sly', 'Solyc03g006430.3' => 'sly', 'Solyc03g006456.1' => 'sly', 'Solyc03g079860.2' => 'sly', 'Solyc04g079770.3' => 'sly', 'Solyc05g007430.4' => 'sly', 'Solyc07g063150.3' => 'sly', 'Solyc08g016620.3' => 'sly', 'Solyc09g057590.3' => 'sly', 'Solyc09g057600.1' => 'sly', 'Solyc10g009050.3' => 'sly', 'Solyc11g017420.2' => 'sly', 'Sopen01g053810' => 'spe', 'Sopen02g023040' => 'spe', 'Sopen03g002440' => 'spe', 'Sopen04g033350' => 'spe', 'Sopen05g003310' => 'spe', 'Sopen07g004050' => 'spe', 'Sopen07g031340' => 'spe', 'Sopen08g006990' => 'spe', 'Sopen10g004830' => 'spe', 'Sopen11g009370' => 'spe', 'Sp1g24450' => 'spa', 'Sp1g29670' => 'spa', 'Sp1g39600' => 'spa', 'Sp2g11080' => 'spa', 'Sp2g13970' => 'spa', 'Sp4g16130' => 'spa', 'Sp6g13080' => 'spa', 'Sp7g37270' => 'spa', 'TAR371G0065' => 'tar', 'TAR376G0340' => 'tar', 'TAR376G0435' => 'tar', 'TAR381G0002' => 'tar', 'TAR381G1236' => 'tar', 'TAR624G0055' => 'tar', 'TAR624G0324' => 'tar', 'TAR624G0696' => 'tar', 'TAR624G0906' => 'tar', 'TAR625G0107' => 'tar', 'TAR626G0015' => 'tar', 'TAR626G1356' => 'tar', 'TAR627G0888' => 'tar', 'TAR628G0399' => 'tar', 'TAR628G1327' => 'tar', 'TAR629G2831' => 'tar', 'TAR629G2874' => 'tar', 'TAR633G1432' => 'tar', 'TAR633G2771' => 'tar', 'THA.LOC104803394' => 'tha', 'THA.LOC104805153' => 'tha', 'THA.LOC104806784' => 'tha', 'THA.LOC104810473' => 'tha', 'THA.LOC104813100' => 'tha', 'THA.LOC104814215' => 'tha', 'THA.LOC104815554' => 'tha', 'THA.LOC104820544' => 'tha', 'THA.LOC104824754' => 'tha', 'THA.LOC104827717' => 'tha', 'Thecc.02G031400' => 'tca', 'Thecc.02G055900' => 'tca', 'Thecc.02G350800' => 'tca', 'Thecc.06G150900' => 'tca', 'Thecc.06G186600' => 'tca', 'Thecc.07G089600' => 'tca', 'Thecc.08G020400' => 'tca', 'Thecc.08G182100' => 'tca', 'Thhalv10000873m.g' => 'esa', 'Thhalv10004185m.g' => 'esa', 'Thhalv10006981m.g' => 'esa', 'Thhalv10007204m.g' => 'esa', 'Thhalv10011374m.g' => 'esa', 'Thhalv10013482m.g' => 'esa', 'Thhalv10017801m.g' => 'esa', 'Thhalv10024983m.g' => 'esa', 'TPR.G12072' => 'tpr', 'TPR.G15769' => 'tpr', 'TPR.G16504' => 'tpr', 'TPR.G16506' => 'tpr', 'TPR.G24345' => 'tpr', 'TPR.G26666' => 'tpr', 'TPR.G27320' => 'tpr', 'TPR.G31819' => 'tpr', 'TPR.G38879' => 'tpr', 'TPR.G39015' => 'tpr', 'TPR.G8819' => 'tpr', 'TWI09G0924' => 'twi', 'TWI12G0811' => 'twi', 'TWI12G1294' => 'twi', 'TWI31G0150' => 'twi', 'TWI36G1262' => 'twi', 'TWI38G1287' => 'twi', 'TWI38G1633' => 'twi', 'TWI38G1982' => 'twi', 'TWI39G0116' => 'twi', 'TWI60G1011' => 'twi', 'TWI63G0171' => 'twi', 'TWI73G0839' => 'twi', 'TWI79G1511' => 'twi', 'unitig_0.g915' => 'ugi', 'unitig_0.g916' => 'ugi', 'unitig_21.g20219' => 'ugi', 'unitig_21.g20416' => 'ugi', 'unitig_578.g16132' => 'ugi', 'unitig_578.g16718' => 'ugi', 'unitig_62.g23481' => 'ugi', 'unitig_744.g24535' => 'ugi', 'unitig_749.g13525' => 'ugi', 'vmacro01248' => 'vma', 'vmacro02290' => 'vma', 'vmacro10946' => 'vma', 'vmacro11865' => 'vma', 'vmacro12493' => 'vma', 'vmacro17322' => 'vma', 'vmacro21599' => 'vma', 'vmacro23041' => 'vma', 'VMungo0251G0004' => 'vmu', 'VMungo0251G2639' => 'vmu', 'VMungo0251G2967' => 'vmu', 'VMungo0540G0864' => 'vmu', 'VMungo0540G1569' => 'vmu', 'VMungo0647G0317' => 'vmu', 'VMungo0720G1373' => 'vmu', 'VMungo0720G1508' => 'vmu', 'VMungo1080G0485' => 'vmu', 'VMungo1215G3177' => 'vmu', 'Zm00001eb112600' => 'zma', 'Zm00001eb120220' => 'zma', 'Zm00001eb153240' => 'zma', 'Zm00001eb168880' => 'zma', 'Zm00001eb213920' => 'zma', 'Zm00001eb228280' => 'zma', 'Zm00001eb254580' => 'zma', 'Zm00001eb272180' => 'zma', 'Zm00001eb293190' => 'zma', 'Zm00001eb322930' => 'zma', 'Zm00001eb353360' => 'zma', 'Zm00001eb353390' => 'zma', 'Zm00001eb353430' => 'zma', 'Zm00001eb353440' => 'zma', 'Zm00001eb353780' => 'zma' ) $gf_id = 'HOM05D000499' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000499' ) $data_identifier = 'HOM05D000499' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 29, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 12, 'amhyb' => (int) 8, 'aly' => (int) 12, 'aox' => (int) 9, 'arhy' => (int) 26, 'ath' => (int) 8, 'atr' => (int) 7, 'acertr' => (int) 10, 'cqu' => (int) 15, 'bca' => (int) 29, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 11, 'cansat' => (int) 8, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 9, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 8, 'cpa' => (int) 10, 'csa' => (int) 7, 'camsi' => (int) 20, 'dca' => (int) 8, 'din' => (int) 12, 'dzi' => (int) 14, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 6, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 38, 'gra' => (int) 16, 'vvi' => (int) 8, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 5, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 11, 'lja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 11, 'mpo' => (int) 3, 'mbi' => (int) 14, 'mdo' => (int) 14, 'mtr' => (int) 8, 'cme' => (int) 9, 'egut' => (int) 9, 'ama' => (int) 11, 'nta' => (int) 17, 'nnu' => (int) 11, 'oeu' => (int) 18, 'osa' => (int) 8, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 6, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 9, 'rsi' => (int) 9, 'sbr' => (int) 10, 'sbo' => (int) 8, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 10, 'sas' => (int) 10, 'shi' => (int) 6, 'smo' => (int) 7, 'sly' => (int) 14, 'spe' => (int) 10, 'spa' => (int) 8, 'tar' => (int) 19, 'tha' => (int) 10, 'tca' => (int) 8, 'esa' => (int) 8, 'tpr' => (int) 11, 'twi' => (int) 13, 'ugi' => (int) 9, 'vma' => (int) 8, 'vmu' => (int) 10, 'zma' => (int) 15 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb353780' $species_info = array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ) $local_species = 'sbo' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000499', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1066', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p29780' => 'bna', 'A02p33180' => 'bna', 'A03p16470' => 'bna', 'A03p66010' => 'bna', 'A04p25970' => 'bna', 'A06p01270' => 'bna', 'A06p46080' => 'bna', 'A07p11400' => 'bna', 'A08p01840' => 'bna', 'A08p08230' => 'bna', 'A08p25740' => 'bna', 'A09p32070' => 'bna', 'A09p37830' => 'bna', 'A09p42840' => 'bna', 'A09p42850' => 'bna', 'Aa31LG10G2060' => 'aar', 'Aa31LG2G7410' => 'aar', 'Aa31LG6G10200' => 'aar', 'Aa31LG6G16680' => 'aar', 'Aa31LG6G8470' => 'aar', 'Aa31LG9G12730' => 'aar', 'Aa31LG9G13680' => 'aar', 'Aa31LG9G14920' => 'aar', 'Aa31LG9G6650' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4977' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5467' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3254' => 'aag', 'Actinidia02578' => 'ach', 'Actinidia07693' => 'ach', 'Actinidia08413' => 'ach', 'Actinidia08414' => 'ach', 'Actinidia15289' => 'ach', 'Actinidia19871' => 'ach', 'Actinidia21475' => 'ach', 'Actinidia22576' => 'ach', 'Actinidia28327' => 'ach', 'Actinidia32491' => 'ach', 'Actinidia39463' => 'ach', 'Actinidia39571' => 'ach', 'Ah.01g013750' => 'amhyb', 'Ah.01g023210' => 'amhyb', 'Ah.04g164850' => 'amhyb', 'Ah.05g178060' => 'amhyb', 'Ah.07g204270' => 'amhyb', 'Ah.07g208480' => 'amhyb', 'Ah.09g237410' => 'amhyb', 'Ah.14g089460' => 'amhyb', 'AL1G41790' => 'aly', 'AL1G49050' => 'aly', 'AL1G53810' => 'aly', 'AL1G61400' => 'aly', 'AL4G18580' => 'aly', 'AL5G12510' => 'aly', 'AL5G12540' => 'aly', 'AL6G43230' => 'aly', 'AL7G10370' => 'aly', 'AL7G19250' => 'aly', 'AL8G12240' => 'aly', 'AL8G18540' => 'aly', 'Aqoxy1G02409' => 'aox', 'Aqoxy2G03993' => 'aox', 'Aqoxy3G03357' => 'aox', 'Aqoxy4G00785' => 'aox', 'Aqoxy5G02598' => 'aox', 'Aqoxy6G00132' => 'aox', 'Aqoxy7G01776' => 'aox', 'Aqoxy7G02316' => 'aox', 'Aqoxy7G03973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.12AFKW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B8730' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27IQR1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3F75VG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3RE0GA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41TCQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.527VTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FIR39' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5W8UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DA38EV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ63HS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H1I32C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HC27T5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4M8AP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7N3CZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9UVDZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LS1NQA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT1D4B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SKC4TM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCFV76' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF9Q1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQWD9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1ZM88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WE07RT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YCK7VH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJE6Q6' => 'arhy', 'AT1G28240' => 'ath', 'AT1G34550' => 'ath', 'AT1G53040' => 'ath', 'AT2G02910' => 'ath', 'AT4G09630' => 'ath', 'AT4G38500' => 'ath', 'AT5G42660' => 'ath', 'AT5G46220' => 'ath', 'ATR0152G026' => 'atr', 'ATR0564G343' => 'atr', 'ATR0706G151' => 'atr', 'ATR0733G207' => 'atr', 'ATR0751G234' => 'atr', 'ATR0807G048' => 'atr', 'ATR1091G084' => 'atr', 'Atru.chr10.1229' => 'acertr', 'Atru.chr10.1230' => 'acertr', 'Atru.chr10.1874' => 'acertr', 'Atru.chr11.1808' => 'acertr', 'Atru.chr13.1795' => 'acertr', 'Atru.chr13.570' => 'acertr', 'Atru.chr2.2608' => 'acertr', 'Atru.chr2.2609' => 'acertr', 'Atru.chr5.3428' => 'acertr', 'Atru.chr8.1171' => 'acertr', 'AUR62004651' => 'cqu', 'AUR62008675' => 'cqu', 'AUR62010014' => 'cqu', 'AUR62013004' => 'cqu', 'AUR62014825' => 'cqu', 'AUR62015015' => 'cqu', 'AUR62015151' => 'cqu', 'AUR62017020' => 'cqu', 'AUR62019422' => 'cqu', 'AUR62023570' => 'cqu', 'AUR62025571' => 'cqu', 'AUR62029098' => 'cqu', 'AUR62033863' => 'cqu', 'AUR62034296' => 'cqu', 'AUR62040075' => 'cqu', 'BcaB02g07334' => 'bca', 'BcaB02g10575' => 'bca', 'BcaB03g12119' => 'bca', 'BcaB03g12120' => 'bca', 'BcaB03g13945' => 'bca', 'BcaB04g17123' => 'bca', 'BcaB04g17867' => 'bca', 'BcaB04g19839' => 'bca', 'BcaB07g30317' => 'bca', 'BcaB07g32432' => 'bca', 'BcaB07g33362' => 'bca', 'BcaB08g36611' => 'bca', 'BcaC01g00028' => 'bca', 'BcaC01g01356' => 'bca', 'BcaC01g02034' => 'bca', 'BcaC01g06051' => 'bca', 'BcaC03g16839' => 'bca', 'BcaC03g17176' => 'bca', 'BcaC05g26829' => 'bca', 'BcaC06g31490' => 'bca', 'BcaC06g35344' => 'bca', 'BcaC06g36570' => 'bca', 'BcaC07g37537' => 'bca', 'BcaC08g43491' => 'bca', 'BcaC08g43773' => 'bca', 'BcaNung00234' => 'bca', 'BcaNung01982' => 'bca', 'BcaNung03707' => 'bca', 'BcaNung06454' => 'bca', 'BolC2t10762H' => 'bol', 'BolC2t11191H' => 'bol', 'BolC3t14322H' => 'bol', 'BolC3t19747H' => 'bol', 'BolC3t21425H' => 'bol', 'BolC4t27800H' => 'bol', 'BolC5t31423H' => 'bol', 'BolC6t35951H' => 'bol', 'BolC6t36282H' => 'bol', 'BolC7t40678H' => 'bol', 'BolC7t40679H' => 'bol', 'BolC7t42222H' => 'bol', 'BolC7t43492H' => 'bol', 'BolC7t46785H' => 'bol', 'BolC8t47853H' => 'bol', 'BolC9t56805H' => 'bol', 'BraA02t08000Z' => 'bra', 'BraA02t08341Z' => 'bra', 'BraA03t10936Z' => 'bra', 'BraA03t15657Z' => 'bra', 'BraA04t18100Z' => 'bra', 'BraA05t20523Z' => 'bra', 'BraA06t23353Z' => 'bra', 'BraA06t27473Z' => 'bra', 'BraA06t27769Z' => 'bra', 'BraA07t28928Z' => 'bra', 'BraA08t32236Z' => 'bra', 'BraA08t32841Z' => 'bra', 'BraA08t34524Z' => 'bra', 'BraA09t38742Z' => 'bra', 'BraA09t39295Z' => 'bra', 'C02p47180' => 'bna', 'C02p50990' => 'bna', 'C03p19360' => 'bna', 'C03p74950' => 'bna', 'C03p91000' => 'bna', 'C04p63260' => 'bna', 'C05p27050' => 'bna', 'C06p08750' => 'bna', 'C06p11490' => 'bna', 'C07p02820' => 'bna', 'C07p17180' => 'bna', 'C07p29440' => 'bna', 'C07p63730' => 'bna', 'C09p39260' => 'bna', 'CAN.G1164.34' => 'can', 'CAN.G1164.39' => 'can', 'CAN.G1530.3' => 'can', 'CAN.G162.61' => 'can', 'CAN.G176.6' => 'can', 'CAN.G289.49' => 'can', 'CAN.G370.21' => 'can', 'CAN.G370.22' => 'can', 'CAN.G371.117' => 'can', 'CAN.G58.37' => 'can', 'CAN.G588.98' => 'can', 'CANSAT21G2266' => 'cansat', 'CANSAT25G2799' => 'cansat', 'CANSAT35G0862' => 'cansat', 'CANSAT35G1704' => 'cansat', 'CANSAT35G1760' => 'cansat', 'CANSAT56G3971' => 'cansat', 'CANSAT56G4116' => 'cansat', 'CANSAT80G1259' => 'cansat', 'CARHR027730' => 'chi', 'CARHR033880' => 'chi', 'CARHR043270' => 'chi', 'CARHR145330' => 'chi', 'CARHR145340' => 'chi', 'CARHR175570' => 'chi', 'CARHR181570' => 'chi', 'CARHR258470' => 'chi', 'CARHR260490' => 'chi', 'CARHR294220' => 'chi', 'Carub.0001s2668' => 'cru', 'Carub.0001s3257' => 'cru', 'Carub.0001s4220' => 'cru', 'Carub.0005s0179' => 'cru', 'Carub.0006s2807' => 'cru', 'Carub.0007s0039' => 'cru', 'Carub.0008s0169' => 'cru', 'Carub.0008s0636' => 'cru', 'Ca_00338_v3' => 'car', 'Ca_00542_v3' => 'car', 'Ca_01844_v3' => 'car', 'Ca_10611_v3' => 'car', 'Ca_13326_v3' => 'car', 'Ca_17944_v3' => 'car', 'Ca_18546_v3' => 'car', 'Ca_24219_v3' => 'car', 'Ca_29972_v3' => 'car', 'CBR_g3681' => 'cbr', 'CBR_g40021' => 'cbr', 'Cc01_g08140' => 'ccan', 'Cc02_g13410' => 'ccan', 'Cc02_g37480' => 'ccan', 'Cc05_g12030' => 'ccan', 'Cc09_g03370' => 'ccan', 'Cc09_g10300' => 'ccan', 'Cc10_g03530' => 'ccan', 'Cc10_g11380' => 'ccan', 'CDE01G0176' => 'cde', 'CDE02G0675' => 'cde', 'CDE02G0942' => 'cde', 'CDE02G1153' => 'cde', 'CDE02G4177' => 'cde', 'CDE04G2117' => 'cde', 'CDE04G2736' => 'cde', 'CDE08G1161' => 'cde', 'CDE09G1238' => 'cde', 'Cfa000467' => 'cfa', 'Cfa000947' => 'cfa', 'Cfa004969' => 'cfa', 'Cfa005284' => 'cfa', 'Cfa008993' => 'cfa', 'Cfa018187' => 'cfa', 'Cfa018454' => 'cfa', 'Cfa020585' => 'cfa', 'Ciclev10000424m.g' => 'ccl', 'Ciclev10003605m.g' => 'ccl', 'Ciclev10007828m.g' => 'ccl', 'Ciclev10014620m.g' => 'ccl', 'Ciclev10015169m.g' => 'ccl', 'Ciclev10018291m.g' => 'ccl', 'Ciclev10028256m.g' => 'ccl', 'Ciclev10033822m.g' => 'ccl', 'CiPaw.05G060300' => 'cil', 'CiPaw.05G085000' => 'cil', 'CiPaw.06G083700' => 'cil', 'CiPaw.06G120300' => 'cil', 'CiPaw.09G060500' => 'cil', 'CiPaw.09G123800' => 'cil', 'CiPaw.11G169700' => 'cil', 'CiPaw.12G118300' => 'cil', 'CiPaw.15G071000' => 'cil', 'CiPaw.15G081900' => 'cil', 'ClCG01G024610' => 'cla', 'ClCG03G006070' => 'cla', 'ClCG05G019250' => 'cla', 'ClCG09G009500' => 'cla', 'ClCG11G008200' => 'cla', 'ClCG11G018080' => 'cla', 'COL.COLO4_17373' => 'col', 'COL.COLO4_22994' => 'col', 'COL.COLO4_26389' => 'col', 'COL.COLO4_27170' => 'col', 'COL.COLO4_31074' => 'col', 'COL.COLO4_31465' => 'col', 'COL.COLO4_36438' => 'col', 'COL.COLO4_36439' => 'col', 'Cpa.g.c38781' => 'cpa', 'Cpa.g.sc128.12' => 'cpa', 'Cpa.g.sc166.7' => 'cpa', 'Cpa.g.sc166.8' => 'cpa', 'Cpa.g.sc20.111' => 'cpa', 'Cpa.g.sc27.31' => 'cpa', 'Cpa.g.sc64.36' => 'cpa', 'Cpa.g.sc64.37' => 'cpa', 'Cpa.g.sc66.49' => 'cpa', 'Cpa.g.sc80.64' => 'cpa', 'CsaV3_1G012320' => 'csa', 'CsaV3_2G008480' => 'csa', 'CsaV3_2G033450' => 'csa', 'CsaV3_3G044830' => 'csa', 'CsaV3_4G033710' => 'csa', 'CsaV3_6G051730' => 'csa', 'CsaV3_7G025350' => 'csa', 'CSS0001067' => 'camsi', 'CSS0005996' => 'camsi', 'CSS0006590' => 'camsi', 'CSS0009673' => 'camsi', 'CSS0010201' => 'camsi', 'CSS0010549' => 'camsi', 'CSS0011364' => 'camsi', 'CSS0014473' => 'camsi', 'CSS0014961' => 'camsi', 'CSS0020191' => 'camsi', 'CSS0021165' => 'camsi', 'CSS0022306' => 'camsi', 'CSS0030591' => 'camsi', 'CSS0030696' => 'camsi', 'CSS0032653' => 'camsi', 'CSS0037487' => 'camsi', 'CSS0041102' => 'camsi', 'CSS0041261' => 'camsi', 'CSS0046246' => 'camsi', 'CSS0049256' => 'camsi', 'DCAR_004075' => 'dca', 'DCAR_011538' => 'dca', 'DCAR_019553' => 'dca', 'DCAR_020952' => 'dca', 'DCAR_021739' => 'dca', 'DCAR_027407' => 'dca', 'DCAR_027913' => 'dca', 'DCAR_028066' => 'dca', 'Dinv05899' => 'din', 'Dinv07563' => 'din', 'Dinv08010' => 'din', 'Dinv14125' => 'din', 'Dinv20172' => 'din', 'Dinv30743' => 'din', 'Dinv31229' => 'din', 'Dinv34162' => 'din', 'Dinv36028' => 'din', 'Dinv39368' => 'din', 'Dinv40565' => 'din', 'Dinv41706' => 'din', 'Duzib052G0089' => 'dzi', 'Duzib116G0641' => 'dzi', 'Duzib132G0069' => 'dzi', 'Duzib132G1219' => 'dzi', 'Duzib147G0278' => 'dzi', 'Duzib160G0480' => 'dzi', 'Duzib170G0661' => 'dzi', 'Duzib177G0591' => 'dzi', 'Duzib187G1353' => 'dzi', 'Duzib192G0858' => 'dzi', 'Duzib192G0883' => 'dzi', 'Duzib213G0506' => 'dzi', 'Duzib235G0289' => 'dzi', 'Duzib251G0422' => 'dzi', 'ECA232G3898' => 'eca', 'ECA233G5950' => 'eca', 'ECA234G1699' => 'eca', 'ECA234G2421' => 'eca', 'ECA236G0426' => 'eca', 'ECA236G4331' => 'eca', 'ECA248G2573' => 'eca', 'EL10Ac1g00077' => 'bvu', 'EL10Ac1g01746' => 'bvu', 'EL10Ac2g03464' => 'bvu', 'EL10Ac4g08176' => 'bvu', 'EL10Ac7g17521' => 'bvu', 'EL10Ac8g20386' => 'bvu', 'EL10Ac9g21343' => 'bvu', 'EL10Ac9g22688' => 'bvu', 'Eucgr.B03434' => 'egr', 'Eucgr.D00618' => 'egr', 'Eucgr.E02395' => 'egr', 'Eucgr.F01129' => 'egr', 'Eucgr.F02622' => 'egr', 'Eucgr.F04207' => 'egr', 'FAN01G0570' => 'fan', 'FAN03G3351' => 'fan', 'FAN06G3702' => 'fan', 'FAN07G2149' => 'fan', 'FAN10G3758' => 'fan', 'FAN11G1170' => 'fan', 'FAN11G2050' => 'fan', 'FAN11G2724' => 'fan', 'FAN12G1700' => 'fan', 'FAN12G2028' => 'fan', 'FAN15G1160' => 'fan', 'FAN15G3063' => 'fan', 'FAN16G2540' => 'fan', 'FAN16G3077' => 'fan', 'FAN16G3624' => 'fan', 'FAN17G0221' => 'fan', 'FAN20G2492' => 'fan', 'FAN20G2905' => 'fan', 'FAN21G0548' => 'fan', 'FAN21G1300' => 'fan', 'FAN22G0077' => 'fan', 'FAN22G1315' => 'fan', 'FAN24G1280' => 'fan', 'FAN24G1445' => 'fan', 'FAN24G3527' => 'fan', 'FAN25G0464' => 'fan', 'FAN25G2885' => 'fan', 'FAN25G3270' => 'fan', 'FAN27G1101' => 'fan', 'FAN27G2846' => 'fan', 'FAN27G3524' => 'fan', 'FvH4_2g11770' => 'fve', 'FvH4_2g15630' => 'fve', 'FvH4_3g05570' => 'fve', 'FvH4_3g09110' => 'fve', 'FvH4_3g19940' => 'fve', 'FvH4_4g04821' => 'fve', 'FvH4_4g31480' => 'fve', 'FvH4_7g01740' => 'fve', 'Glyma.05G130400' => 'gma', 'Glyma.05G156400' => 'gma', 'Glyma.07G197000' => 'gma', 'Glyma.08G085151' => 'gma', 'Glyma.08G114500' => 'gma', 'Glyma.08G300400' => 'gma', 'Glyma.10G215800' => 'gma', 'Glyma.12G224400' => 'gma', 'Glyma.13G179300' => 'gma', 'Glyma.13G218151' => 'gma', 'Glyma.13G238800' => 'gma', 'Glyma.13G276900' => 'gma', 'Glyma.14G078200' => 'gma', 'Glyma.15G074500' => 'gma', 'Glyma.15G094100' => 'gma', 'Glyma.17G247200' => 'gma', 'Glyma.18G120100' => 'gma', 'Glyma.20G176000' => 'gma', 'Gohir.A01G063600' => 'ghi', 'Gohir.A01G170301' => 'ghi', 'Gohir.A02G060500' => 'ghi', 'Gohir.A05G133850' => 'ghi', 'Gohir.A05G161400' => 'ghi', 'Gohir.A06G012900' => 'ghi', 'Gohir.A06G035901' => 'ghi', 'Gohir.A06G127100' => 'ghi', 'Gohir.A06G210500' => 'ghi', 'Gohir.A08G008650' => 'ghi', 'Gohir.A09G072700' => 'ghi', 'Gohir.A09G088301' => 'ghi', 'Gohir.A10G040600' => 'ghi', 'Gohir.A12G036300' => 'ghi', 'Gohir.A12G143350' => 'ghi', 'Gohir.A12G165500' => 'ghi', 'Gohir.A13G145700' => 'ghi', 'Gohir.D01G050000' => 'ghi', 'Gohir.D01G051366' => 'ghi', 'Gohir.D01G161350' => 'ghi', 'Gohir.D02G065900' => 'ghi', 'Gohir.D05G164200' => 'ghi', 'Gohir.D05G355500' => 'ghi', 'Gohir.D06G010400' => 'ghi', 'Gohir.D06G111250' => 'ghi', 'Gohir.D06G132000' => 'ghi', 'Gohir.D06G210500' => 'ghi', 'Gohir.D07G165675' => 'ghi', 'Gohir.D08G062240' => 'ghi', 'Gohir.D08G086101' => 'ghi', 'Gohir.D08G138060' => 'ghi', 'Gohir.D09G072300' => 'ghi', 'Gohir.D10G041400' => 'ghi', 'Gohir.D11G191020' => 'ghi', 'Gohir.D11G212066' => 'ghi', 'Gohir.D12G036300' => 'ghi', 'Gohir.D12G168600' => 'ghi', 'Gohir.D13G150600' => 'ghi', 'Gorai.001G057300' => 'gra', 'Gorai.002G069900' => 'gra', 'Gorai.002G200000' => 'gra', 'Gorai.003G067600' => 'gra', 'Gorai.005G074800' => 'gra', 'Gorai.006G087300' => 'gra', 'Gorai.008G037500' => 'gra', 'Gorai.008G181400' => 'gra', 'Gorai.009G169400' => 'gra', 'Gorai.009G387900' => 'gra', 'Gorai.010G013300' => 'gra', 'Gorai.010G153800' => 'gra', 'Gorai.010G255800' => 'gra', 'Gorai.011G043700' => 'gra', 'Gorai.011G198900' => 'gra', 'Gorai.013G168400' => 'gra', 'GSVIVG01005212001' => 'vvi', 'GSVIVG01006163001' => 'vvi', 'GSVIVG01009625001' => 'vvi', 'GSVIVG01014338001' => 'vvi', 'GSVIVG01020005001' => 'vvi', 'GSVIVG01021450001' => 'vvi', 'GSVIVG01023975001' => 'vvi', 'GSVIVG01034490001' => 'vvi', 'HanXRQChr04g0112071' => 'han', 'HanXRQChr05g0131151' => 'han', 'HanXRQChr09g0262371' => 'han', 'HanXRQChr09g0268401' => 'han', 'HanXRQChr10g0279241' => 'han', 'HanXRQChr10g0297961' => 'han', 'HanXRQChr11g0326231' => 'han', 'HanXRQChr11g0328471' => 'han', 'HanXRQChr16g0507941' => 'han', 'HanXRQChr17g0560211' => 'han', 'Haze_02108' => 'cav', 'Haze_02428' => 'cav', 'Haze_05593' => 'cav', 'Haze_06448' => 'cav', 'Haze_09427' => 'cav', 'Haze_12022' => 'cav', 'Haze_17612' => 'cav', 'Haze_17928' => 'cav', 'Hma1.2p1_0032F.1_g019250' => 'hma', 'Hma1.2p1_0163F.1_g072690' => 'hma', 'Hma1.2p1_0265F.1_g106710' => 'hma', 'Hma1.2p1_0286F.1_g113970' => 'hma', 'Hma1.2p1_0363F.1_g136640' => 'hma', 'Hma1.2p1_0584F.1_g183470' => 'hma', 'Hma1.2p1_0885F.1_g232570' => 'hma', 'HPP92_006022' => 'vpl', 'HPP92_007320' => 'vpl', 'HPP92_011521' => 'vpl', 'HPP92_019387' => 'vpl', 'HPP92_024038' => 'vpl', 'Hund05891' => 'sun', 'Hund06450' => 'sun', 'Hund12053' => 'sun', 'Hund16800' => 'sun', 'Hund21222' => 'sun', 'Hund22896' => 'sun', 'Hund23746' => 'sun', 'Hund27083' => 'sun', 'Lalb_Chr02g0141831' => 'lal', 'Lalb_Chr02g0141841' => 'lal', 'Lalb_Chr05g0220411' => 'lal', 'Lalb_Chr06g0162081' => 'lal', 'Lalb_Chr09g0327651' => 'lal', 'Lalb_Chr13g0295051' => 'lal', 'Lalb_Chr15g0086801' => 'lal', 'Lalb_Chr16g0383781' => 'lal', 'Lalb_Chr16g0383791' => 'lal', 'Lalb_Chr18g0055441' => 'lal', 'Lalb_Chr18g0059611' => 'lal', 'Lalb_Chr20g0109661' => 'lal', 'Lalb_Chr20g0109831' => 'lal', 'Lalb_Chr20g0121871' => 'lal', 'Lalb_Chr22g0355361' => 'lal', 'Lalb_Chr25g0286371' => 'lal', 'Lj1A1187G43' => 'lonja', 'Lj1A1205T50' => 'lonja', 'Lj1A800G33' => 'lonja', 'Lj1C1187T7' => 'lonja', 'Lj1C843T11' => 'lonja', 'Lj1g0010940' => 'lja', 'Lj2A288T69' => 'lonja', 'Lj3g0024276' => 'lja', 'Lj4A47T76' => 'lonja', 'Lj4g0005805' => 'lja', 'Lj4g0006097' => 'lja', 'Lj4g0008528' => 'lja', 'Lj4g0024907' => 'lja', 'Lj5g0012472' => 'lja', 'Lj5g0018648' => 'lja', 'Lj6C789G1' => 'lonja', 'Lj6g0004000' => 'lja', 'Lj7A292G67' => 'lonja', 'Lj7A292T64' => 'lonja', 'Lj9A400T58' => 'lonja', 'Lsat_1_v5_gn_1_126181' => 'lsa', 'Lsat_1_v5_gn_4_123041' => 'lsa', 'Lsat_1_v5_gn_4_133620' => 'lsa', 'Lsat_1_v5_gn_4_53221' => 'lsa', 'Lsat_1_v5_gn_4_71961' => 'lsa', 'Lsat_1_v5_gn_7_105241' => 'lsa', 'Lsat_1_v5_gn_7_21361' => 'lsa', 'Lsat_1_v5_gn_7_28860' => 'lsa', 'Lsat_1_v5_gn_7_31260' => 'lsa', 'Lsat_1_v5_gn_8_52801' => 'lsa', 'Manes.02G191400' => 'mes', 'Manes.03G110100' => 'mes', 'Manes.04G071100' => 'mes', 'Manes.05G100500' => 'mes', 'Manes.05G164700' => 'mes', 'Manes.15G087000' => 'mes', 'Manes.15G121500' => 'mes', 'Manes.16G028300' => 'mes', 'Manes.17G046100' => 'mes', 'Manes.17G069800' => 'mes', 'Manes.18G100500' => 'mes', 'Mapoly0002s0109' => 'mpo', 'Mapoly0024s0007' => 'mpo', 'Mapoly0089s0032' => 'mpo', 'MBI04_g42241_MAGBIO' => 'mbi', 'MBI05_g11988_MAGBIO' => 'mbi', 'MBI05_g35452_MAGBIO' => 'mbi', 'MBI07_g30179_MAGBIO' => 'mbi', 'MBI07_g35859_MAGBIO' => 'mbi', 'MBI07_g35860_MAGBIO' => 'mbi', 'MBI07_g37166_MAGBIO' => 'mbi', 'MBI08_g18172_MAGBIO' => 'mbi', 'MBI09_g08441_MAGBIO' => 'mbi', 'MBI13_g01676_MAGBIO' => 'mbi', 'MBI14_g42955_MAGBIO' => 'mbi', 'MBI16_g13161_MAGBIO' => 'mbi', 'MBI17_g27204_MAGBIO' => 'mbi', 'MBI19_g21595_MAGBIO' => 'mbi', 'MD00G1148400' => 'mdo', 'MD02G1301200' => 'mdo', 'MD03G1227800' => 'mdo', 'MD05G1041100' => 'mdo', 'MD05G1124800' => 'mdo', 'MD05G1284000' => 'mdo', 'MD05G1338800' => 'mdo', 'MD05G1338900' => 'mdo', 'MD07G1022800' => 'mdo', 'MD10G1047500' => 'mdo', 'MD10G1127500' => 'mdo', 'MD10G1262300' => 'mdo', 'MD10G1293800' => 'mdo', 'MD16G1074300' => 'mdo', 'Medtr1g021670' => 'mtr', 'Medtr1g096320' => 'mtr', 'Medtr2g013690' => 'mtr', 'Medtr2g019450' => 'mtr', 'Medtr2g085170' => 'mtr', 'Medtr4g088785' => 'mtr', 'Medtr8g055930' => 'mtr', 'Medtr8g085850' => 'mtr', 'MELO3C002605.2' => 'cme', 'MELO3C003891.2' => 'cme', 'MELO3C004012.2' => 'cme', 'MELO3C007134.2' => 'cme', 'MELO3C008118.2' => 'cme', 'MELO3C016700.2' => 'cme', 'MELO3C024127.2' => 'cme', 'MELO3C033361.2' => 'cme', 'MELO3C033362.2' => 'cme', 'Migut.C00430' => 'egut', 'Migut.C01246' => 'egut', 'Migut.E00101' => 'egut', 'Migut.H01486' => 'egut', 'Migut.H01939' => 'egut', 'Migut.K00360' => 'egut', 'Migut.M00910' => 'egut', 'Migut.M01139' => 'egut', 'Migut.N02677' => 'egut', 'MSTRG.13252' => 'ama', 'MSTRG.14701' => 'ama', 'MSTRG.1521' => 'ama', 'MSTRG.15884' => 'ama', 'MSTRG.16242' => 'ama', 'MSTRG.22285' => 'ama', 'MSTRG.22444' => 'ama', 'MSTRG.2349' => 'ama', 'MSTRG.26308' => 'ama', 'MSTRG.28296' => 'ama', 'MSTRG.9895' => 'ama', 'Nitab4.5_0000110g0060' => 'nta', 'Nitab4.5_0000420g0130' => 'nta', 'Nitab4.5_0000422g0030' => 'nta', 'Nitab4.5_0000560g0180' => 'nta', 'Nitab4.5_0000703g0100' => 'nta', 'Nitab4.5_0000786g0200' => 'nta', 'Nitab4.5_0001336g0020' => 'nta', 'Nitab4.5_0001796g0030' => 'nta', 'Nitab4.5_0003348g0060' => 'nta', 'Nitab4.5_0003698g0040' => 'nta', 'Nitab4.5_0003942g0090' => 'nta', 'Nitab4.5_0004775g0070' => 'nta', 'Nitab4.5_0004864g0030' => 'nta', 'Nitab4.5_0005615g0020' => 'nta', 'Nitab4.5_0009288g0030' => 'nta', 'Nitab4.5_0009341g0010' => 'nta', 'Nitab4.5_0009535g0010' => 'nta', 'Nn1g03995' => 'nnu', 'Nn1g04100' => 'nnu', 'Nn1g06530' => 'nnu', 'Nn3g16404' => 'nnu', 'Nn3g17212' => 'nnu', 'Nn3g20776' => 'nnu', 'Nn3g21923' => 'nnu', 'Nn5g27737' => 'nnu', 'Nn5g29461' => 'nnu', 'Nn7g38355' => 'nnu', 'Nn8g39873' => 'nnu', 'Oeu000548.2' => 'oeu', 'Oeu004672.1' => 'oeu', 'Oeu015605.2' => 'oeu', 'Oeu016092.1' => 'oeu', 'Oeu017879.3' => 'oeu', 'Oeu024910.1' => 'oeu', 'Oeu028965.1' => 'oeu', 'Oeu031269.1' => 'oeu', 'Oeu031270.1' => 'oeu', 'Oeu032535.1' => 'oeu', 'Oeu034151.1' => 'oeu', 'Oeu034152.1' => 'oeu', 'Oeu034588.2' => 'oeu', 'Oeu050846.1' => 'oeu', 'Oeu050849.2' => 'oeu', 'Oeu051063.2' => 'oeu', 'Oeu052368.1' => 'oeu', 'Oeu052370.1' => 'oeu', 'Os01g0210400' => 'osa', 'Os01g0304300' => 'osa', 'Os01g0749100' => 'osa', 'Os02g0745800' => 'osa', 'Os03g0769050' => 'osa', 'Os05g0531500' => 'osa', 'Os06g0724300' => 'osa', 'Os11g0198100' => 'osa', 'Peaxi162Scf00069g01425' => 'pax', 'Peaxi162Scf00280g00811' => 'pax', 'Peaxi162Scf00310g00615' => 'pax', 'Peaxi162Scf00362g00542' => 'pax', 'Peaxi162Scf00461g00310' => 'pax', 'Peaxi162Scf00530g00118' => 'pax', 'Peaxi162Scf00541g00057' => 'pax', 'Peaxi162Scf00661g00017' => 'pax', 'Peaxi162Scf00926g00027' => 'pax', 'Peaxi162Scf01064g00263' => 'pax', 'Peaxi162Scf01211g00135' => 'pax', 'PGR004G2336' => 'pgr', 'PGR042G0327' => 'pgr', 'PGR042G1957' => 'pgr', 'PGR042G2003' => 'pgr', 'PGR042G3929' => 'pgr', 'PGR083G1137' => 'pgr', 'PGR083G1364' => 'pgr', 'PGSC0003DMG400003381' => 'stu', 'PGSC0003DMG400003417' => 'stu', 'PGSC0003DMG400008981' => 'stu', 'PGSC0003DMG400012417' => 'stu', 'PGSC0003DMG400012823' => 'stu', 'PGSC0003DMG400016885' => 'stu', 'PGSC0003DMG400022812' => 'stu', 'PGSC0003DMG400029726' => 'stu', 'PGSC0003DMG401009243' => 'stu', 'PGSC0003DMG401031505' => 'stu', 'PGSC0003DMG402031505' => 'stu', 'Phvul.001G017600' => 'pvu', 'Phvul.002G193500' => 'pvu', 'Phvul.002G228900' => 'pvu', 'Phvul.002G236800' => 'pvu', 'Phvul.003G049500' => 'pvu', 'Phvul.005G072000' => 'pvu', 'Phvul.006G164800' => 'pvu', 'Phvul.006G185100' => 'pvu', 'Phvul.007G090000' => 'pvu', 'Potri.001G399800' => 'ptr', 'Potri.002G149900' => 'ptr', 'Potri.004G044100' => 'ptr', 'Potri.004G177600' => 'ptr', 'Potri.009G138000' => 'ptr', 'Potri.010G094000' => 'ptr', 'Potri.011G053000' => 'ptr', 'Potri.011G119300' => 'ptr', 'Potri.013G113700' => 'ptr', 'Potri.018G107800' => 'ptr', 'Potri.019G084100' => 'ptr', 'Pp3c14_23720' => 'ppa', 'Pp3c16_6340' => 'ppa', 'Pp3c23_13420' => 'ppa', 'Pp3c24_2740' => 'ppa', 'Pp3c25_860' => 'ppa', 'Pp3c8_21750' => 'ppa', 'Prupe.1G273000' => 'ppe', 'Prupe.1G273700' => 'ppe', 'Prupe.1G274100' => 'ppe', 'Prupe.2G023300' => 'ppe', 'Prupe.4G048000' => 'ppe', 'Prupe.4G080400' => 'ppe', 'Prupe.4G181200' => 'ppe', 'Prupe.8G056900' => 'ppe', 'Prupe.8G168700' => 'ppe', 'Psat1g189080' => 'psa', 'Psat1g204760' => 'psa', 'Psat4g175560' => 'psa', 'Psat4g177720' => 'psa', 'Psat5g244240' => 'psa', 'Psat6g010720' => 'psa', 'Psat6g187200' => 'psa', 'Psat7g072040' => 'psa', 'PSO017G3501' => 'pso', 'PSO063G2148' => 'pso', 'PSO063G5608' => 'pso', 'PSO210G6392' => 'pso', 'PSO541G2319' => 'pso', 'PSO541G2836' => 'pso', 'PSO541G4012' => 'pso', 'PSO541G6253' => 'pso', 'PSO675G0580' => 'pso', 'PSO675G0856' => 'pso', 'PSO675G5635' => 'pso', 'PSO675G9157' => 'pso', 'PSO832G1660' => 'pso', 'PSO832G1969' => 'pso', 'QL02p007186' => 'qlo', 'QL02p033904' => 'qlo', 'QL03p064391' => 'qlo', 'QL05p040593' => 'qlo', 'QL05p058242' => 'qlo', 'QL08p021825' => 'qlo', 'QL11p004981' => 'qlo', 'RcHm_v2.0_Chr1g0318301' => 'rch', 'RcHm_v2.0_Chr4g0418501' => 'rch', 'RcHm_v2.0_Chr4g0439971' => 'rch', 'RcHm_v2.0_Chr5g0008541' => 'rch', 'RcHm_v2.0_Chr5g0014101' => 'rch', 'RcHm_v2.0_Chr5g0014131' => 'rch', 'RcHm_v2.0_Chr5g0033621' => 'rch', 'RcHm_v2.0_Chr6g0272041' => 'rch', 'RcHm_v2.0_Chr6g0278831' => 'rch', 'Rhsim02G0130400' => 'rsi', 'Rhsim02G0171100' => 'rsi', 'Rhsim05G0053000' => 'rsi', 'Rhsim05G0053100' => 'rsi', 'Rhsim06G0096500' => 'rsi', 'Rhsim06G0096600' => 'rsi', 'Rhsim06G0199100' => 'rsi', 'Rhsim12G0062300' => 'rsi', 'Rhsim12G0062800' => 'rsi', 'Sabra02G0118600' => 'sbr', 'Sabra04G0027300' => 'sbr', 'Sabra04G0119500' => 'sbr', 'Sabra08G0112500' => 'sbr', 'Sabra11G0036800' => 'sbr', 'Sabra11G0103800' => 'sbr', 'Sabra13G0096300' => 'sbr', 'Sabra16G0262300' => 'sbr', 'Sabra18G0091700' => 'sbr', 'Sabra19G0095400' => 'sbr', 'SalBow6G3080' => 'sbo', 'SalBow7G1157' => 'sbo', 'SalBow7G2123' => 'sbo', 'SalBow7G2285' => 'sbo', 'SalBow7G3537' => 'sbo', 'SalBow8G2947' => 'sbo', 'SalBow8G4463' => 'sbo', 'SalBow8G5466' => 'sbo', 'Sc01g0001750' => 'sci', 'Sc02g0006640' => 'sci', 'Sc02g0006670' => 'sci', 'Sc04g0008220' => 'sci', 'Sc05g0006190' => 'sci', 'Sc08g0002760' => 'sci', 'Sc17g0006170' => 'sci', 'Sc22g0002050' => 'sci', 'Sc23g0001190' => 'sci', 'Sc24g0000980' => 'sci', 'Sed0006245' => 'sed', 'Sed0007543' => 'sed', 'Sed0009411' => 'sed', 'Sed0010765' => 'sed', 'Sed0012944' => 'sed', 'Sed0014682' => 'sed', 'Sed0016174' => 'sed', 'Sed0016796' => 'sed', 'Sed0020317' => 'sed', 'Sed0021467' => 'sed', 'SEGI_01316' => 'sgi', 'SEGI_03374' => 'sgi', 'SEGI_16265' => 'sgi', 'SEGI_18569' => 'sgi', 'SEGI_20351' => 'sgi', 'SEGI_26395' => 'sgi', 'SEGI_29469' => 'sgi', 'SEGI_34771' => 'sgi', 'SEGI_36769' => 'sgi', 'SEGI_37139' => 'sgi', 'SGA_v2.0_scaffold100G29687' => 'sas', 'SGA_v2.0_scaffold118G32472' => 'sas', 'SGA_v2.0_scaffold14G07051' => 'sas', 'SGA_v2.0_scaffold183G39845' => 'sas', 'SGA_v2.0_scaffold1G00174' => 'sas', 'SGA_v2.0_scaffold22G09714' => 'sas', 'SGA_v2.0_scaffold333G48992' => 'sas', 'SGA_v2.0_scaffold46G17491' => 'sas', 'SGA_v2.0_scaffold49G18294' => 'sas', 'SGA_v2.0_scaffold63G21658' => 'sas', 'SHI01741' => 'shi', 'SHI05771' => 'shi', 'SHI18077' => 'shi', 'SHI20525' => 'shi', 'SHI20527' => 'shi', 'SHI20528' => 'shi', 'SMO172G0185' => 'smo', 'SMO198G0020' => 'smo', 'SMO351G0006' => 'smo', 'SMO356G0118' => 'smo', 'SMO358G0296' => 'smo', 'SMO367G0079' => 'smo', 'SMO367G1277' => 'smo', 'Solyc01g014220.3' => 'sly', 'Solyc01g111770.2' => 'sly', 'Solyc02g078180.3' => 'sly', 'Solyc03g006430.3' => 'sly', 'Solyc03g006456.1' => 'sly', 'Solyc03g079860.2' => 'sly', 'Solyc04g079770.3' => 'sly', 'Solyc05g007430.4' => 'sly', 'Solyc07g063150.3' => 'sly', 'Solyc08g016620.3' => 'sly', 'Solyc09g057590.3' => 'sly', 'Solyc09g057600.1' => 'sly', 'Solyc10g009050.3' => 'sly', 'Solyc11g017420.2' => 'sly', 'Sopen01g053810' => 'spe', 'Sopen02g023040' => 'spe', 'Sopen03g002440' => 'spe', 'Sopen04g033350' => 'spe', 'Sopen05g003310' => 'spe', 'Sopen07g004050' => 'spe', 'Sopen07g031340' => 'spe', 'Sopen08g006990' => 'spe', 'Sopen10g004830' => 'spe', 'Sopen11g009370' => 'spe', 'Sp1g24450' => 'spa', 'Sp1g29670' => 'spa', 'Sp1g39600' => 'spa', 'Sp2g11080' => 'spa', 'Sp2g13970' => 'spa', 'Sp4g16130' => 'spa', 'Sp6g13080' => 'spa', 'Sp7g37270' => 'spa', 'TAR371G0065' => 'tar', 'TAR376G0340' => 'tar', 'TAR376G0435' => 'tar', 'TAR381G0002' => 'tar', 'TAR381G1236' => 'tar', 'TAR624G0055' => 'tar', 'TAR624G0324' => 'tar', 'TAR624G0696' => 'tar', 'TAR624G0906' => 'tar', 'TAR625G0107' => 'tar', 'TAR626G0015' => 'tar', 'TAR626G1356' => 'tar', 'TAR627G0888' => 'tar', 'TAR628G0399' => 'tar', 'TAR628G1327' => 'tar', 'TAR629G2831' => 'tar', 'TAR629G2874' => 'tar', 'TAR633G1432' => 'tar', 'TAR633G2771' => 'tar', 'THA.LOC104803394' => 'tha', 'THA.LOC104805153' => 'tha', 'THA.LOC104806784' => 'tha', 'THA.LOC104810473' => 'tha', 'THA.LOC104813100' => 'tha', 'THA.LOC104814215' => 'tha', 'THA.LOC104815554' => 'tha', 'THA.LOC104820544' => 'tha', 'THA.LOC104824754' => 'tha', 'THA.LOC104827717' => 'tha', 'Thecc.02G031400' => 'tca', 'Thecc.02G055900' => 'tca', 'Thecc.02G350800' => 'tca', 'Thecc.06G150900' => 'tca', 'Thecc.06G186600' => 'tca', 'Thecc.07G089600' => 'tca', 'Thecc.08G020400' => 'tca', 'Thecc.08G182100' => 'tca', 'Thhalv10000873m.g' => 'esa', 'Thhalv10004185m.g' => 'esa', 'Thhalv10006981m.g' => 'esa', 'Thhalv10007204m.g' => 'esa', 'Thhalv10011374m.g' => 'esa', 'Thhalv10013482m.g' => 'esa', 'Thhalv10017801m.g' => 'esa', 'Thhalv10024983m.g' => 'esa', 'TPR.G12072' => 'tpr', 'TPR.G15769' => 'tpr', 'TPR.G16504' => 'tpr', 'TPR.G16506' => 'tpr', 'TPR.G24345' => 'tpr', 'TPR.G26666' => 'tpr', 'TPR.G27320' => 'tpr', 'TPR.G31819' => 'tpr', 'TPR.G38879' => 'tpr', 'TPR.G39015' => 'tpr', 'TPR.G8819' => 'tpr', 'TWI09G0924' => 'twi', 'TWI12G0811' => 'twi', 'TWI12G1294' => 'twi', 'TWI31G0150' => 'twi', 'TWI36G1262' => 'twi', 'TWI38G1287' => 'twi', 'TWI38G1633' => 'twi', 'TWI38G1982' => 'twi', 'TWI39G0116' => 'twi', 'TWI60G1011' => 'twi', 'TWI63G0171' => 'twi', 'TWI73G0839' => 'twi', 'TWI79G1511' => 'twi', 'unitig_0.g915' => 'ugi', 'unitig_0.g916' => 'ugi', 'unitig_21.g20219' => 'ugi', 'unitig_21.g20416' => 'ugi', 'unitig_578.g16132' => 'ugi', 'unitig_578.g16718' => 'ugi', 'unitig_62.g23481' => 'ugi', 'unitig_744.g24535' => 'ugi', 'unitig_749.g13525' => 'ugi', 'vmacro01248' => 'vma', 'vmacro02290' => 'vma', 'vmacro10946' => 'vma', 'vmacro11865' => 'vma', 'vmacro12493' => 'vma', 'vmacro17322' => 'vma', 'vmacro21599' => 'vma', 'vmacro23041' => 'vma', 'VMungo0251G0004' => 'vmu', 'VMungo0251G2639' => 'vmu', 'VMungo0251G2967' => 'vmu', 'VMungo0540G0864' => 'vmu', 'VMungo0540G1569' => 'vmu', 'VMungo0647G0317' => 'vmu', 'VMungo0720G1373' => 'vmu', 'VMungo0720G1508' => 'vmu', 'VMungo1080G0485' => 'vmu', 'VMungo1215G3177' => 'vmu', 'Zm00001eb112600' => 'zma', 'Zm00001eb120220' => 'zma', 'Zm00001eb153240' => 'zma', 'Zm00001eb168880' => 'zma', 'Zm00001eb213920' => 'zma', 'Zm00001eb228280' => 'zma', 'Zm00001eb254580' => 'zma', 'Zm00001eb272180' => 'zma', 'Zm00001eb293190' => 'zma', 'Zm00001eb322930' => 'zma', 'Zm00001eb353360' => 'zma', 'Zm00001eb353390' => 'zma', 'Zm00001eb353430' => 'zma', 'Zm00001eb353440' => 'zma', 'Zm00001eb353780' => 'zma' ), 'gf_id' => 'HOM05D000499', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000499' ), 'data_identifier' => 'HOM05D000499', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000499', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1066', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p29780' => 'bna', 'A02p33180' => 'bna', 'A03p16470' => 'bna', 'A03p66010' => 'bna', 'A04p25970' => 'bna', 'A06p01270' => 'bna', 'A06p46080' => 'bna', 'A07p11400' => 'bna', 'A08p01840' => 'bna', 'A08p08230' => 'bna', 'A08p25740' => 'bna', 'A09p32070' => 'bna', 'A09p37830' => 'bna', 'A09p42840' => 'bna', 'A09p42850' => 'bna', 'Aa31LG10G2060' => 'aar', 'Aa31LG2G7410' => 'aar', 'Aa31LG6G10200' => 'aar', 'Aa31LG6G16680' => 'aar', 'Aa31LG6G8470' => 'aar', 'Aa31LG9G12730' => 'aar', 'Aa31LG9G13680' => 'aar', 'Aa31LG9G14920' => 'aar', 'Aa31LG9G6650' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4977' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5467' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3254' => 'aag', 'Actinidia02578' => 'ach', 'Actinidia07693' => 'ach', 'Actinidia08413' => 'ach', 'Actinidia08414' => 'ach', 'Actinidia15289' => 'ach', 'Actinidia19871' => 'ach', 'Actinidia21475' => 'ach', 'Actinidia22576' => 'ach', 'Actinidia28327' => 'ach', 'Actinidia32491' => 'ach', 'Actinidia39463' => 'ach', 'Actinidia39571' => 'ach', 'Ah.01g013750' => 'amhyb', 'Ah.01g023210' => 'amhyb', 'Ah.04g164850' => 'amhyb', 'Ah.05g178060' => 'amhyb', 'Ah.07g204270' => 'amhyb', 'Ah.07g208480' => 'amhyb', 'Ah.09g237410' => 'amhyb', 'Ah.14g089460' => 'amhyb', 'AL1G41790' => 'aly', 'AL1G49050' => 'aly', 'AL1G53810' => 'aly', 'AL1G61400' => 'aly', 'AL4G18580' => 'aly', 'AL5G12510' => 'aly', 'AL5G12540' => 'aly', 'AL6G43230' => 'aly', 'AL7G10370' => 'aly', 'AL7G19250' => 'aly', 'AL8G12240' => 'aly', 'AL8G18540' => 'aly', 'Aqoxy1G02409' => 'aox', 'Aqoxy2G03993' => 'aox', 'Aqoxy3G03357' => 'aox', 'Aqoxy4G00785' => 'aox', 'Aqoxy5G02598' => 'aox', 'Aqoxy6G00132' => 'aox', 'Aqoxy7G01776' => 'aox', 'Aqoxy7G02316' => 'aox', 'Aqoxy7G03973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.12AFKW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B8730' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27IQR1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3F75VG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3RE0GA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41TCQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.527VTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FIR39' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5W8UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DA38EV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ63HS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H1I32C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HC27T5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4M8AP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7N3CZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9UVDZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LS1NQA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT1D4B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SKC4TM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCFV76' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF9Q1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQWD9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1ZM88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WE07RT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YCK7VH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJE6Q6' => 'arhy', 'AT1G28240' => 'ath', 'AT1G34550' => 'ath', 'AT1G53040' => 'ath', 'AT2G02910' => 'ath', 'AT4G09630' => 'ath', 'AT4G38500' => 'ath', 'AT5G42660' => 'ath', 'AT5G46220' => 'ath', 'ATR0152G026' => 'atr', 'ATR0564G343' => 'atr', 'ATR0706G151' => 'atr', 'ATR0733G207' => 'atr', 'ATR0751G234' => 'atr', 'ATR0807G048' => 'atr', 'ATR1091G084' => 'atr', 'Atru.chr10.1229' => 'acertr', 'Atru.chr10.1230' => 'acertr', 'Atru.chr10.1874' => 'acertr', 'Atru.chr11.1808' => 'acertr', 'Atru.chr13.1795' => 'acertr', 'Atru.chr13.570' => 'acertr', 'Atru.chr2.2608' => 'acertr', 'Atru.chr2.2609' => 'acertr', 'Atru.chr5.3428' => 'acertr', 'Atru.chr8.1171' => 'acertr', 'AUR62004651' => 'cqu', 'AUR62008675' => 'cqu', 'AUR62010014' => 'cqu', 'AUR62013004' => 'cqu', 'AUR62014825' => 'cqu', 'AUR62015015' => 'cqu', 'AUR62015151' => 'cqu', 'AUR62017020' => 'cqu', 'AUR62019422' => 'cqu', 'AUR62023570' => 'cqu', 'AUR62025571' => 'cqu', 'AUR62029098' => 'cqu', 'AUR62033863' => 'cqu', 'AUR62034296' => 'cqu', 'AUR62040075' => 'cqu', 'BcaB02g07334' => 'bca', 'BcaB02g10575' => 'bca', 'BcaB03g12119' => 'bca', 'BcaB03g12120' => 'bca', 'BcaB03g13945' => 'bca', 'BcaB04g17123' => 'bca', 'BcaB04g17867' => 'bca', 'BcaB04g19839' => 'bca', 'BcaB07g30317' => 'bca', 'BcaB07g32432' => 'bca', 'BcaB07g33362' => 'bca', 'BcaB08g36611' => 'bca', 'BcaC01g00028' => 'bca', 'BcaC01g01356' => 'bca', 'BcaC01g02034' => 'bca', 'BcaC01g06051' => 'bca', 'BcaC03g16839' => 'bca', 'BcaC03g17176' => 'bca', 'BcaC05g26829' => 'bca', 'BcaC06g31490' => 'bca', 'BcaC06g35344' => 'bca', 'BcaC06g36570' => 'bca', 'BcaC07g37537' => 'bca', 'BcaC08g43491' => 'bca', 'BcaC08g43773' => 'bca', 'BcaNung00234' => 'bca', 'BcaNung01982' => 'bca', 'BcaNung03707' => 'bca', 'BcaNung06454' => 'bca', 'BolC2t10762H' => 'bol', 'BolC2t11191H' => 'bol', 'BolC3t14322H' => 'bol', 'BolC3t19747H' => 'bol', 'BolC3t21425H' => 'bol', 'BolC4t27800H' => 'bol', 'BolC5t31423H' => 'bol', 'BolC6t35951H' => 'bol', 'BolC6t36282H' => 'bol', 'BolC7t40678H' => 'bol', 'BolC7t40679H' => 'bol', 'BolC7t42222H' => 'bol', 'BolC7t43492H' => 'bol', 'BolC7t46785H' => 'bol', 'BolC8t47853H' => 'bol', 'BolC9t56805H' => 'bol', 'BraA02t08000Z' => 'bra', 'BraA02t08341Z' => 'bra', 'BraA03t10936Z' => 'bra', 'BraA03t15657Z' => 'bra', 'BraA04t18100Z' => 'bra', 'BraA05t20523Z' => 'bra', 'BraA06t23353Z' => 'bra', 'BraA06t27473Z' => 'bra', 'BraA06t27769Z' => 'bra', 'BraA07t28928Z' => 'bra', 'BraA08t32236Z' => 'bra', 'BraA08t32841Z' => 'bra', 'BraA08t34524Z' => 'bra', 'BraA09t38742Z' => 'bra', 'BraA09t39295Z' => 'bra', 'C02p47180' => 'bna', 'C02p50990' => 'bna', 'C03p19360' => 'bna', 'C03p74950' => 'bna', 'C03p91000' => 'bna', 'C04p63260' => 'bna', 'C05p27050' => 'bna', 'C06p08750' => 'bna', 'C06p11490' => 'bna', 'C07p02820' => 'bna', 'C07p17180' => 'bna', 'C07p29440' => 'bna', 'C07p63730' => 'bna', 'C09p39260' => 'bna', 'CAN.G1164.34' => 'can', 'CAN.G1164.39' => 'can', 'CAN.G1530.3' => 'can', 'CAN.G162.61' => 'can', 'CAN.G176.6' => 'can', 'CAN.G289.49' => 'can', 'CAN.G370.21' => 'can', 'CAN.G370.22' => 'can', 'CAN.G371.117' => 'can', 'CAN.G58.37' => 'can', 'CAN.G588.98' => 'can', 'CANSAT21G2266' => 'cansat', 'CANSAT25G2799' => 'cansat', 'CANSAT35G0862' => 'cansat', 'CANSAT35G1704' => 'cansat', 'CANSAT35G1760' => 'cansat', 'CANSAT56G3971' => 'cansat', 'CANSAT56G4116' => 'cansat', 'CANSAT80G1259' => 'cansat', 'CARHR027730' => 'chi', 'CARHR033880' => 'chi', 'CARHR043270' => 'chi', 'CARHR145330' => 'chi', 'CARHR145340' => 'chi', 'CARHR175570' => 'chi', 'CARHR181570' => 'chi', 'CARHR258470' => 'chi', 'CARHR260490' => 'chi', 'CARHR294220' => 'chi', 'Carub.0001s2668' => 'cru', 'Carub.0001s3257' => 'cru', 'Carub.0001s4220' => 'cru', 'Carub.0005s0179' => 'cru', 'Carub.0006s2807' => 'cru', 'Carub.0007s0039' => 'cru', 'Carub.0008s0169' => 'cru', 'Carub.0008s0636' => 'cru', 'Ca_00338_v3' => 'car', 'Ca_00542_v3' => 'car', 'Ca_01844_v3' => 'car', 'Ca_10611_v3' => 'car', 'Ca_13326_v3' => 'car', 'Ca_17944_v3' => 'car', 'Ca_18546_v3' => 'car', 'Ca_24219_v3' => 'car', 'Ca_29972_v3' => 'car', 'CBR_g3681' => 'cbr', 'CBR_g40021' => 'cbr', 'Cc01_g08140' => 'ccan', 'Cc02_g13410' => 'ccan', 'Cc02_g37480' => 'ccan', 'Cc05_g12030' => 'ccan', 'Cc09_g03370' => 'ccan', 'Cc09_g10300' => 'ccan', 'Cc10_g03530' => 'ccan', 'Cc10_g11380' => 'ccan', 'CDE01G0176' => 'cde', 'CDE02G0675' => 'cde', 'CDE02G0942' => 'cde', 'CDE02G1153' => 'cde', 'CDE02G4177' => 'cde', 'CDE04G2117' => 'cde', 'CDE04G2736' => 'cde', 'CDE08G1161' => 'cde', 'CDE09G1238' => 'cde', 'Cfa000467' => 'cfa', 'Cfa000947' => 'cfa', 'Cfa004969' => 'cfa', 'Cfa005284' => 'cfa', 'Cfa008993' => 'cfa', 'Cfa018187' => 'cfa', 'Cfa018454' => 'cfa', 'Cfa020585' => 'cfa', 'Ciclev10000424m.g' => 'ccl', 'Ciclev10003605m.g' => 'ccl', 'Ciclev10007828m.g' => 'ccl', 'Ciclev10014620m.g' => 'ccl', 'Ciclev10015169m.g' => 'ccl', 'Ciclev10018291m.g' => 'ccl', 'Ciclev10028256m.g' => 'ccl', 'Ciclev10033822m.g' => 'ccl', 'CiPaw.05G060300' => 'cil', 'CiPaw.05G085000' => 'cil', 'CiPaw.06G083700' => 'cil', 'CiPaw.06G120300' => 'cil', 'CiPaw.09G060500' => 'cil', 'CiPaw.09G123800' => 'cil', 'CiPaw.11G169700' => 'cil', 'CiPaw.12G118300' => 'cil', 'CiPaw.15G071000' => 'cil', 'CiPaw.15G081900' => 'cil', 'ClCG01G024610' => 'cla', 'ClCG03G006070' => 'cla', 'ClCG05G019250' => 'cla', 'ClCG09G009500' => 'cla', 'ClCG11G008200' => 'cla', 'ClCG11G018080' => 'cla', 'COL.COLO4_17373' => 'col', 'COL.COLO4_22994' => 'col', 'COL.COLO4_26389' => 'col', 'COL.COLO4_27170' => 'col', 'COL.COLO4_31074' => 'col', 'COL.COLO4_31465' => 'col', 'COL.COLO4_36438' => 'col', 'COL.COLO4_36439' => 'col', 'Cpa.g.c38781' => 'cpa', 'Cpa.g.sc128.12' => 'cpa', 'Cpa.g.sc166.7' => 'cpa', 'Cpa.g.sc166.8' => 'cpa', 'Cpa.g.sc20.111' => 'cpa', 'Cpa.g.sc27.31' => 'cpa', 'Cpa.g.sc64.36' => 'cpa', 'Cpa.g.sc64.37' => 'cpa', 'Cpa.g.sc66.49' => 'cpa', 'Cpa.g.sc80.64' => 'cpa', 'CsaV3_1G012320' => 'csa', 'CsaV3_2G008480' => 'csa', 'CsaV3_2G033450' => 'csa', 'CsaV3_3G044830' => 'csa', 'CsaV3_4G033710' => 'csa', 'CsaV3_6G051730' => 'csa', 'CsaV3_7G025350' => 'csa', 'CSS0001067' => 'camsi', 'CSS0005996' => 'camsi', 'CSS0006590' => 'camsi', 'CSS0009673' => 'camsi', 'CSS0010201' => 'camsi', 'CSS0010549' => 'camsi', 'CSS0011364' => 'camsi', 'CSS0014473' => 'camsi', 'CSS0014961' => 'camsi', 'CSS0020191' => 'camsi', 'CSS0021165' => 'camsi', 'CSS0022306' => 'camsi', 'CSS0030591' => 'camsi', 'CSS0030696' => 'camsi', 'CSS0032653' => 'camsi', 'CSS0037487' => 'camsi', 'CSS0041102' => 'camsi', 'CSS0041261' => 'camsi', 'CSS0046246' => 'camsi', 'CSS0049256' => 'camsi', 'DCAR_004075' => 'dca', 'DCAR_011538' => 'dca', 'DCAR_019553' => 'dca', 'DCAR_020952' => 'dca', 'DCAR_021739' => 'dca', 'DCAR_027407' => 'dca', 'DCAR_027913' => 'dca', 'DCAR_028066' => 'dca', 'Dinv05899' => 'din', 'Dinv07563' => 'din', 'Dinv08010' => 'din', 'Dinv14125' => 'din', 'Dinv20172' => 'din', 'Dinv30743' => 'din', 'Dinv31229' => 'din', 'Dinv34162' => 'din', 'Dinv36028' => 'din', 'Dinv39368' => 'din', 'Dinv40565' => 'din', 'Dinv41706' => 'din', 'Duzib052G0089' => 'dzi', 'Duzib116G0641' => 'dzi', 'Duzib132G0069' => 'dzi', 'Duzib132G1219' => 'dzi', 'Duzib147G0278' => 'dzi', 'Duzib160G0480' => 'dzi', 'Duzib170G0661' => 'dzi', 'Duzib177G0591' => 'dzi', 'Duzib187G1353' => 'dzi', 'Duzib192G0858' => 'dzi', 'Duzib192G0883' => 'dzi', 'Duzib213G0506' => 'dzi', 'Duzib235G0289' => 'dzi', 'Duzib251G0422' => 'dzi', 'ECA232G3898' => 'eca', 'ECA233G5950' => 'eca', 'ECA234G1699' => 'eca', 'ECA234G2421' => 'eca', 'ECA236G0426' => 'eca', 'ECA236G4331' => 'eca', 'ECA248G2573' => 'eca', 'EL10Ac1g00077' => 'bvu', 'EL10Ac1g01746' => 'bvu', 'EL10Ac2g03464' => 'bvu', 'EL10Ac4g08176' => 'bvu', 'EL10Ac7g17521' => 'bvu', 'EL10Ac8g20386' => 'bvu', 'EL10Ac9g21343' => 'bvu', 'EL10Ac9g22688' => 'bvu', 'Eucgr.B03434' => 'egr', 'Eucgr.D00618' => 'egr', 'Eucgr.E02395' => 'egr', 'Eucgr.F01129' => 'egr', 'Eucgr.F02622' => 'egr', 'Eucgr.F04207' => 'egr', 'FAN01G0570' => 'fan', 'FAN03G3351' => 'fan', 'FAN06G3702' => 'fan', 'FAN07G2149' => 'fan', 'FAN10G3758' => 'fan', 'FAN11G1170' => 'fan', 'FAN11G2050' => 'fan', 'FAN11G2724' => 'fan', 'FAN12G1700' => 'fan', 'FAN12G2028' => 'fan', 'FAN15G1160' => 'fan', 'FAN15G3063' => 'fan', 'FAN16G2540' => 'fan', 'FAN16G3077' => 'fan', 'FAN16G3624' => 'fan', 'FAN17G0221' => 'fan', 'FAN20G2492' => 'fan', 'FAN20G2905' => 'fan', 'FAN21G0548' => 'fan', 'FAN21G1300' => 'fan', 'FAN22G0077' => 'fan', 'FAN22G1315' => 'fan', 'FAN24G1280' => 'fan', 'FAN24G1445' => 'fan', 'FAN24G3527' => 'fan', 'FAN25G0464' => 'fan', 'FAN25G2885' => 'fan', 'FAN25G3270' => 'fan', 'FAN27G1101' => 'fan', 'FAN27G2846' => 'fan', 'FAN27G3524' => 'fan', 'FvH4_2g11770' => 'fve', 'FvH4_2g15630' => 'fve', 'FvH4_3g05570' => 'fve', 'FvH4_3g09110' => 'fve', 'FvH4_3g19940' => 'fve', 'FvH4_4g04821' => 'fve', 'FvH4_4g31480' => 'fve', 'FvH4_7g01740' => 'fve', 'Glyma.05G130400' => 'gma', 'Glyma.05G156400' => 'gma', 'Glyma.07G197000' => 'gma', 'Glyma.08G085151' => 'gma', 'Glyma.08G114500' => 'gma', 'Glyma.08G300400' => 'gma', 'Glyma.10G215800' => 'gma', 'Glyma.12G224400' => 'gma', 'Glyma.13G179300' => 'gma', 'Glyma.13G218151' => 'gma', 'Glyma.13G238800' => 'gma', 'Glyma.13G276900' => 'gma', 'Glyma.14G078200' => 'gma', 'Glyma.15G074500' => 'gma', 'Glyma.15G094100' => 'gma', 'Glyma.17G247200' => 'gma', 'Glyma.18G120100' => 'gma', 'Glyma.20G176000' => 'gma', 'Gohir.A01G063600' => 'ghi', 'Gohir.A01G170301' => 'ghi', 'Gohir.A02G060500' => 'ghi', 'Gohir.A05G133850' => 'ghi', 'Gohir.A05G161400' => 'ghi', 'Gohir.A06G012900' => 'ghi', 'Gohir.A06G035901' => 'ghi', 'Gohir.A06G127100' => 'ghi', 'Gohir.A06G210500' => 'ghi', 'Gohir.A08G008650' => 'ghi', 'Gohir.A09G072700' => 'ghi', 'Gohir.A09G088301' => 'ghi', 'Gohir.A10G040600' => 'ghi', 'Gohir.A12G036300' => 'ghi', 'Gohir.A12G143350' => 'ghi', 'Gohir.A12G165500' => 'ghi', 'Gohir.A13G145700' => 'ghi', 'Gohir.D01G050000' => 'ghi', 'Gohir.D01G051366' => 'ghi', 'Gohir.D01G161350' => 'ghi', 'Gohir.D02G065900' => 'ghi', 'Gohir.D05G164200' => 'ghi', 'Gohir.D05G355500' => 'ghi', 'Gohir.D06G010400' => 'ghi', 'Gohir.D06G111250' => 'ghi', 'Gohir.D06G132000' => 'ghi', 'Gohir.D06G210500' => 'ghi', 'Gohir.D07G165675' => 'ghi', 'Gohir.D08G062240' => 'ghi', 'Gohir.D08G086101' => 'ghi', 'Gohir.D08G138060' => 'ghi', 'Gohir.D09G072300' => 'ghi', 'Gohir.D10G041400' => 'ghi', 'Gohir.D11G191020' => 'ghi', 'Gohir.D11G212066' => 'ghi', 'Gohir.D12G036300' => 'ghi', 'Gohir.D12G168600' => 'ghi', 'Gohir.D13G150600' => 'ghi', 'Gorai.001G057300' => 'gra', 'Gorai.002G069900' => 'gra', 'Gorai.002G200000' => 'gra', 'Gorai.003G067600' => 'gra', 'Gorai.005G074800' => 'gra', 'Gorai.006G087300' => 'gra', 'Gorai.008G037500' => 'gra', 'Gorai.008G181400' => 'gra', 'Gorai.009G169400' => 'gra', 'Gorai.009G387900' => 'gra', 'Gorai.010G013300' => 'gra', 'Gorai.010G153800' => 'gra', 'Gorai.010G255800' => 'gra', 'Gorai.011G043700' => 'gra', 'Gorai.011G198900' => 'gra', 'Gorai.013G168400' => 'gra', 'GSVIVG01005212001' => 'vvi', 'GSVIVG01006163001' => 'vvi', 'GSVIVG01009625001' => 'vvi', 'GSVIVG01014338001' => 'vvi', 'GSVIVG01020005001' => 'vvi', 'GSVIVG01021450001' => 'vvi', 'GSVIVG01023975001' => 'vvi', 'GSVIVG01034490001' => 'vvi', 'HanXRQChr04g0112071' => 'han', 'HanXRQChr05g0131151' => 'han', 'HanXRQChr09g0262371' => 'han', 'HanXRQChr09g0268401' => 'han', 'HanXRQChr10g0279241' => 'han', 'HanXRQChr10g0297961' => 'han', 'HanXRQChr11g0326231' => 'han', 'HanXRQChr11g0328471' => 'han', 'HanXRQChr16g0507941' => 'han', 'HanXRQChr17g0560211' => 'han', 'Haze_02108' => 'cav', 'Haze_02428' => 'cav', 'Haze_05593' => 'cav', 'Haze_06448' => 'cav', 'Haze_09427' => 'cav', 'Haze_12022' => 'cav', 'Haze_17612' => 'cav', 'Haze_17928' => 'cav', 'Hma1.2p1_0032F.1_g019250' => 'hma', 'Hma1.2p1_0163F.1_g072690' => 'hma', 'Hma1.2p1_0265F.1_g106710' => 'hma', 'Hma1.2p1_0286F.1_g113970' => 'hma', 'Hma1.2p1_0363F.1_g136640' => 'hma', 'Hma1.2p1_0584F.1_g183470' => 'hma', 'Hma1.2p1_0885F.1_g232570' => 'hma', 'HPP92_006022' => 'vpl', 'HPP92_007320' => 'vpl', 'HPP92_011521' => 'vpl', 'HPP92_019387' => 'vpl', 'HPP92_024038' => 'vpl', 'Hund05891' => 'sun', 'Hund06450' => 'sun', 'Hund12053' => 'sun', 'Hund16800' => 'sun', 'Hund21222' => 'sun', 'Hund22896' => 'sun', 'Hund23746' => 'sun', 'Hund27083' => 'sun', 'Lalb_Chr02g0141831' => 'lal', 'Lalb_Chr02g0141841' => 'lal', 'Lalb_Chr05g0220411' => 'lal', 'Lalb_Chr06g0162081' => 'lal', 'Lalb_Chr09g0327651' => 'lal', 'Lalb_Chr13g0295051' => 'lal', 'Lalb_Chr15g0086801' => 'lal', 'Lalb_Chr16g0383781' => 'lal', 'Lalb_Chr16g0383791' => 'lal', 'Lalb_Chr18g0055441' => 'lal', 'Lalb_Chr18g0059611' => 'lal', 'Lalb_Chr20g0109661' => 'lal', 'Lalb_Chr20g0109831' => 'lal', 'Lalb_Chr20g0121871' => 'lal', 'Lalb_Chr22g0355361' => 'lal', 'Lalb_Chr25g0286371' => 'lal', 'Lj1A1187G43' => 'lonja', 'Lj1A1205T50' => 'lonja', 'Lj1A800G33' => 'lonja', 'Lj1C1187T7' => 'lonja', 'Lj1C843T11' => 'lonja', 'Lj1g0010940' => 'lja', 'Lj2A288T69' => 'lonja', 'Lj3g0024276' => 'lja', 'Lj4A47T76' => 'lonja', 'Lj4g0005805' => 'lja', 'Lj4g0006097' => 'lja', 'Lj4g0008528' => 'lja', 'Lj4g0024907' => 'lja', 'Lj5g0012472' => 'lja', 'Lj5g0018648' => 'lja', 'Lj6C789G1' => 'lonja', 'Lj6g0004000' => 'lja', 'Lj7A292G67' => 'lonja', 'Lj7A292T64' => 'lonja', 'Lj9A400T58' => 'lonja', 'Lsat_1_v5_gn_1_126181' => 'lsa', 'Lsat_1_v5_gn_4_123041' => 'lsa', 'Lsat_1_v5_gn_4_133620' => 'lsa', 'Lsat_1_v5_gn_4_53221' => 'lsa', 'Lsat_1_v5_gn_4_71961' => 'lsa', 'Lsat_1_v5_gn_7_105241' => 'lsa', 'Lsat_1_v5_gn_7_21361' => 'lsa', 'Lsat_1_v5_gn_7_28860' => 'lsa', 'Lsat_1_v5_gn_7_31260' => 'lsa', 'Lsat_1_v5_gn_8_52801' => 'lsa', 'Manes.02G191400' => 'mes', 'Manes.03G110100' => 'mes', 'Manes.04G071100' => 'mes', 'Manes.05G100500' => 'mes', 'Manes.05G164700' => 'mes', 'Manes.15G087000' => 'mes', 'Manes.15G121500' => 'mes', 'Manes.16G028300' => 'mes', 'Manes.17G046100' => 'mes', 'Manes.17G069800' => 'mes', 'Manes.18G100500' => 'mes', 'Mapoly0002s0109' => 'mpo', 'Mapoly0024s0007' => 'mpo', 'Mapoly0089s0032' => 'mpo', 'MBI04_g42241_MAGBIO' => 'mbi', 'MBI05_g11988_MAGBIO' => 'mbi', 'MBI05_g35452_MAGBIO' => 'mbi', 'MBI07_g30179_MAGBIO' => 'mbi', 'MBI07_g35859_MAGBIO' => 'mbi', 'MBI07_g35860_MAGBIO' => 'mbi', 'MBI07_g37166_MAGBIO' => 'mbi', 'MBI08_g18172_MAGBIO' => 'mbi', 'MBI09_g08441_MAGBIO' => 'mbi', 'MBI13_g01676_MAGBIO' => 'mbi', 'MBI14_g42955_MAGBIO' => 'mbi', 'MBI16_g13161_MAGBIO' => 'mbi', 'MBI17_g27204_MAGBIO' => 'mbi', 'MBI19_g21595_MAGBIO' => 'mbi', 'MD00G1148400' => 'mdo', 'MD02G1301200' => 'mdo', 'MD03G1227800' => 'mdo', 'MD05G1041100' => 'mdo', 'MD05G1124800' => 'mdo', 'MD05G1284000' => 'mdo', 'MD05G1338800' => 'mdo', 'MD05G1338900' => 'mdo', 'MD07G1022800' => 'mdo', 'MD10G1047500' => 'mdo', 'MD10G1127500' => 'mdo', 'MD10G1262300' => 'mdo', 'MD10G1293800' => 'mdo', 'MD16G1074300' => 'mdo', 'Medtr1g021670' => 'mtr', 'Medtr1g096320' => 'mtr', 'Medtr2g013690' => 'mtr', 'Medtr2g019450' => 'mtr', 'Medtr2g085170' => 'mtr', 'Medtr4g088785' => 'mtr', 'Medtr8g055930' => 'mtr', 'Medtr8g085850' => 'mtr', 'MELO3C002605.2' => 'cme', 'MELO3C003891.2' => 'cme', 'MELO3C004012.2' => 'cme', 'MELO3C007134.2' => 'cme', 'MELO3C008118.2' => 'cme', 'MELO3C016700.2' => 'cme', 'MELO3C024127.2' => 'cme', 'MELO3C033361.2' => 'cme', 'MELO3C033362.2' => 'cme', 'Migut.C00430' => 'egut', 'Migut.C01246' => 'egut', 'Migut.E00101' => 'egut', 'Migut.H01486' => 'egut', 'Migut.H01939' => 'egut', 'Migut.K00360' => 'egut', 'Migut.M00910' => 'egut', 'Migut.M01139' => 'egut', 'Migut.N02677' => 'egut', 'MSTRG.13252' => 'ama', 'MSTRG.14701' => 'ama', 'MSTRG.1521' => 'ama', 'MSTRG.15884' => 'ama', 'MSTRG.16242' => 'ama', 'MSTRG.22285' => 'ama', 'MSTRG.22444' => 'ama', 'MSTRG.2349' => 'ama', 'MSTRG.26308' => 'ama', 'MSTRG.28296' => 'ama', 'MSTRG.9895' => 'ama', 'Nitab4.5_0000110g0060' => 'nta', 'Nitab4.5_0000420g0130' => 'nta', 'Nitab4.5_0000422g0030' => 'nta', 'Nitab4.5_0000560g0180' => 'nta', 'Nitab4.5_0000703g0100' => 'nta', 'Nitab4.5_0000786g0200' => 'nta', 'Nitab4.5_0001336g0020' => 'nta', 'Nitab4.5_0001796g0030' => 'nta', 'Nitab4.5_0003348g0060' => 'nta', 'Nitab4.5_0003698g0040' => 'nta', 'Nitab4.5_0003942g0090' => 'nta', 'Nitab4.5_0004775g0070' => 'nta', 'Nitab4.5_0004864g0030' => 'nta', 'Nitab4.5_0005615g0020' => 'nta', 'Nitab4.5_0009288g0030' => 'nta', 'Nitab4.5_0009341g0010' => 'nta', 'Nitab4.5_0009535g0010' => 'nta', 'Nn1g03995' => 'nnu', 'Nn1g04100' => 'nnu', 'Nn1g06530' => 'nnu', 'Nn3g16404' => 'nnu', 'Nn3g17212' => 'nnu', 'Nn3g20776' => 'nnu', 'Nn3g21923' => 'nnu', 'Nn5g27737' => 'nnu', 'Nn5g29461' => 'nnu', 'Nn7g38355' => 'nnu', 'Nn8g39873' => 'nnu', 'Oeu000548.2' => 'oeu', 'Oeu004672.1' => 'oeu', 'Oeu015605.2' => 'oeu', 'Oeu016092.1' => 'oeu', 'Oeu017879.3' => 'oeu', 'Oeu024910.1' => 'oeu', 'Oeu028965.1' => 'oeu', 'Oeu031269.1' => 'oeu', 'Oeu031270.1' => 'oeu', 'Oeu032535.1' => 'oeu', 'Oeu034151.1' => 'oeu', 'Oeu034152.1' => 'oeu', 'Oeu034588.2' => 'oeu', 'Oeu050846.1' => 'oeu', 'Oeu050849.2' => 'oeu', 'Oeu051063.2' => 'oeu', 'Oeu052368.1' => 'oeu', 'Oeu052370.1' => 'oeu', 'Os01g0210400' => 'osa', 'Os01g0304300' => 'osa', 'Os01g0749100' => 'osa', 'Os02g0745800' => 'osa', 'Os03g0769050' => 'osa', 'Os05g0531500' => 'osa', 'Os06g0724300' => 'osa', 'Os11g0198100' => 'osa', 'Peaxi162Scf00069g01425' => 'pax', 'Peaxi162Scf00280g00811' => 'pax', 'Peaxi162Scf00310g00615' => 'pax', 'Peaxi162Scf00362g00542' => 'pax', 'Peaxi162Scf00461g00310' => 'pax', 'Peaxi162Scf00530g00118' => 'pax', 'Peaxi162Scf00541g00057' => 'pax', 'Peaxi162Scf00661g00017' => 'pax', 'Peaxi162Scf00926g00027' => 'pax', 'Peaxi162Scf01064g00263' => 'pax', 'Peaxi162Scf01211g00135' => 'pax', 'PGR004G2336' => 'pgr', 'PGR042G0327' => 'pgr', 'PGR042G1957' => 'pgr', 'PGR042G2003' => 'pgr', 'PGR042G3929' => 'pgr', 'PGR083G1137' => 'pgr', 'PGR083G1364' => 'pgr', 'PGSC0003DMG400003381' => 'stu', 'PGSC0003DMG400003417' => 'stu', 'PGSC0003DMG400008981' => 'stu', 'PGSC0003DMG400012417' => 'stu', 'PGSC0003DMG400012823' => 'stu', 'PGSC0003DMG400016885' => 'stu', 'PGSC0003DMG400022812' => 'stu', 'PGSC0003DMG400029726' => 'stu', 'PGSC0003DMG401009243' => 'stu', 'PGSC0003DMG401031505' => 'stu', 'PGSC0003DMG402031505' => 'stu', 'Phvul.001G017600' => 'pvu', 'Phvul.002G193500' => 'pvu', 'Phvul.002G228900' => 'pvu', 'Phvul.002G236800' => 'pvu', 'Phvul.003G049500' => 'pvu', 'Phvul.005G072000' => 'pvu', 'Phvul.006G164800' => 'pvu', 'Phvul.006G185100' => 'pvu', 'Phvul.007G090000' => 'pvu', 'Potri.001G399800' => 'ptr', 'Potri.002G149900' => 'ptr', 'Potri.004G044100' => 'ptr', 'Potri.004G177600' => 'ptr', 'Potri.009G138000' => 'ptr', 'Potri.010G094000' => 'ptr', 'Potri.011G053000' => 'ptr', 'Potri.011G119300' => 'ptr', 'Potri.013G113700' => 'ptr', 'Potri.018G107800' => 'ptr', 'Potri.019G084100' => 'ptr', 'Pp3c14_23720' => 'ppa', 'Pp3c16_6340' => 'ppa', 'Pp3c23_13420' => 'ppa', 'Pp3c24_2740' => 'ppa', 'Pp3c25_860' => 'ppa', 'Pp3c8_21750' => 'ppa', 'Prupe.1G273000' => 'ppe', 'Prupe.1G273700' => 'ppe', 'Prupe.1G274100' => 'ppe', 'Prupe.2G023300' => 'ppe', 'Prupe.4G048000' => 'ppe', 'Prupe.4G080400' => 'ppe', 'Prupe.4G181200' => 'ppe', 'Prupe.8G056900' => 'ppe', 'Prupe.8G168700' => 'ppe', 'Psat1g189080' => 'psa', 'Psat1g204760' => 'psa', 'Psat4g175560' => 'psa', 'Psat4g177720' => 'psa', 'Psat5g244240' => 'psa', 'Psat6g010720' => 'psa', 'Psat6g187200' => 'psa', 'Psat7g072040' => 'psa', 'PSO017G3501' => 'pso', 'PSO063G2148' => 'pso', 'PSO063G5608' => 'pso', 'PSO210G6392' => 'pso', 'PSO541G2319' => 'pso', 'PSO541G2836' => 'pso', 'PSO541G4012' => 'pso', 'PSO541G6253' => 'pso', 'PSO675G0580' => 'pso', 'PSO675G0856' => 'pso', 'PSO675G5635' => 'pso', 'PSO675G9157' => 'pso', 'PSO832G1660' => 'pso', 'PSO832G1969' => 'pso', 'QL02p007186' => 'qlo', 'QL02p033904' => 'qlo', 'QL03p064391' => 'qlo', 'QL05p040593' => 'qlo', 'QL05p058242' => 'qlo', 'QL08p021825' => 'qlo', 'QL11p004981' => 'qlo', 'RcHm_v2.0_Chr1g0318301' => 'rch', 'RcHm_v2.0_Chr4g0418501' => 'rch', 'RcHm_v2.0_Chr4g0439971' => 'rch', 'RcHm_v2.0_Chr5g0008541' => 'rch', 'RcHm_v2.0_Chr5g0014101' => 'rch', 'RcHm_v2.0_Chr5g0014131' => 'rch', 'RcHm_v2.0_Chr5g0033621' => 'rch', 'RcHm_v2.0_Chr6g0272041' => 'rch', 'RcHm_v2.0_Chr6g0278831' => 'rch', 'Rhsim02G0130400' => 'rsi', 'Rhsim02G0171100' => 'rsi', 'Rhsim05G0053000' => 'rsi', 'Rhsim05G0053100' => 'rsi', 'Rhsim06G0096500' => 'rsi', 'Rhsim06G0096600' => 'rsi', 'Rhsim06G0199100' => 'rsi', 'Rhsim12G0062300' => 'rsi', 'Rhsim12G0062800' => 'rsi', 'Sabra02G0118600' => 'sbr', 'Sabra04G0027300' => 'sbr', 'Sabra04G0119500' => 'sbr', 'Sabra08G0112500' => 'sbr', 'Sabra11G0036800' => 'sbr', 'Sabra11G0103800' => 'sbr', 'Sabra13G0096300' => 'sbr', 'Sabra16G0262300' => 'sbr', 'Sabra18G0091700' => 'sbr', 'Sabra19G0095400' => 'sbr', 'SalBow6G3080' => 'sbo', 'SalBow7G1157' => 'sbo', 'SalBow7G2123' => 'sbo', 'SalBow7G2285' => 'sbo', 'SalBow7G3537' => 'sbo', 'SalBow8G2947' => 'sbo', 'SalBow8G4463' => 'sbo', 'SalBow8G5466' => 'sbo', 'Sc01g0001750' => 'sci', 'Sc02g0006640' => 'sci', 'Sc02g0006670' => 'sci', 'Sc04g0008220' => 'sci', 'Sc05g0006190' => 'sci', 'Sc08g0002760' => 'sci', 'Sc17g0006170' => 'sci', 'Sc22g0002050' => 'sci', 'Sc23g0001190' => 'sci', 'Sc24g0000980' => 'sci', 'Sed0006245' => 'sed', 'Sed0007543' => 'sed', 'Sed0009411' => 'sed', 'Sed0010765' => 'sed', 'Sed0012944' => 'sed', 'Sed0014682' => 'sed', 'Sed0016174' => 'sed', 'Sed0016796' => 'sed', 'Sed0020317' => 'sed', 'Sed0021467' => 'sed', 'SEGI_01316' => 'sgi', 'SEGI_03374' => 'sgi', 'SEGI_16265' => 'sgi', 'SEGI_18569' => 'sgi', 'SEGI_20351' => 'sgi', 'SEGI_26395' => 'sgi', 'SEGI_29469' => 'sgi', 'SEGI_34771' => 'sgi', 'SEGI_36769' => 'sgi', 'SEGI_37139' => 'sgi', 'SGA_v2.0_scaffold100G29687' => 'sas', 'SGA_v2.0_scaffold118G32472' => 'sas', 'SGA_v2.0_scaffold14G07051' => 'sas', 'SGA_v2.0_scaffold183G39845' => 'sas', 'SGA_v2.0_scaffold1G00174' => 'sas', 'SGA_v2.0_scaffold22G09714' => 'sas', 'SGA_v2.0_scaffold333G48992' => 'sas', 'SGA_v2.0_scaffold46G17491' => 'sas', 'SGA_v2.0_scaffold49G18294' => 'sas', 'SGA_v2.0_scaffold63G21658' => 'sas', 'SHI01741' => 'shi', 'SHI05771' => 'shi', 'SHI18077' => 'shi', 'SHI20525' => 'shi', 'SHI20527' => 'shi', 'SHI20528' => 'shi', 'SMO172G0185' => 'smo', 'SMO198G0020' => 'smo', 'SMO351G0006' => 'smo', 'SMO356G0118' => 'smo', 'SMO358G0296' => 'smo', 'SMO367G0079' => 'smo', 'SMO367G1277' => 'smo', 'Solyc01g014220.3' => 'sly', 'Solyc01g111770.2' => 'sly', 'Solyc02g078180.3' => 'sly', 'Solyc03g006430.3' => 'sly', 'Solyc03g006456.1' => 'sly', 'Solyc03g079860.2' => 'sly', 'Solyc04g079770.3' => 'sly', 'Solyc05g007430.4' => 'sly', 'Solyc07g063150.3' => 'sly', 'Solyc08g016620.3' => 'sly', 'Solyc09g057590.3' => 'sly', 'Solyc09g057600.1' => 'sly', 'Solyc10g009050.3' => 'sly', 'Solyc11g017420.2' => 'sly', 'Sopen01g053810' => 'spe', 'Sopen02g023040' => 'spe', 'Sopen03g002440' => 'spe', 'Sopen04g033350' => 'spe', 'Sopen05g003310' => 'spe', 'Sopen07g004050' => 'spe', 'Sopen07g031340' => 'spe', 'Sopen08g006990' => 'spe', 'Sopen10g004830' => 'spe', 'Sopen11g009370' => 'spe', 'Sp1g24450' => 'spa', 'Sp1g29670' => 'spa', 'Sp1g39600' => 'spa', 'Sp2g11080' => 'spa', 'Sp2g13970' => 'spa', 'Sp4g16130' => 'spa', 'Sp6g13080' => 'spa', 'Sp7g37270' => 'spa', 'TAR371G0065' => 'tar', 'TAR376G0340' => 'tar', 'TAR376G0435' => 'tar', 'TAR381G0002' => 'tar', 'TAR381G1236' => 'tar', 'TAR624G0055' => 'tar', 'TAR624G0324' => 'tar', 'TAR624G0696' => 'tar', 'TAR624G0906' => 'tar', 'TAR625G0107' => 'tar', 'TAR626G0015' => 'tar', 'TAR626G1356' => 'tar', 'TAR627G0888' => 'tar', 'TAR628G0399' => 'tar', 'TAR628G1327' => 'tar', 'TAR629G2831' => 'tar', 'TAR629G2874' => 'tar', 'TAR633G1432' => 'tar', 'TAR633G2771' => 'tar', 'THA.LOC104803394' => 'tha', 'THA.LOC104805153' => 'tha', 'THA.LOC104806784' => 'tha', 'THA.LOC104810473' => 'tha', 'THA.LOC104813100' => 'tha', 'THA.LOC104814215' => 'tha', 'THA.LOC104815554' => 'tha', 'THA.LOC104820544' => 'tha', 'THA.LOC104824754' => 'tha', 'THA.LOC104827717' => 'tha', 'Thecc.02G031400' => 'tca', 'Thecc.02G055900' => 'tca', 'Thecc.02G350800' => 'tca', 'Thecc.06G150900' => 'tca', 'Thecc.06G186600' => 'tca', 'Thecc.07G089600' => 'tca', 'Thecc.08G020400' => 'tca', 'Thecc.08G182100' => 'tca', 'Thhalv10000873m.g' => 'esa', 'Thhalv10004185m.g' => 'esa', 'Thhalv10006981m.g' => 'esa', 'Thhalv10007204m.g' => 'esa', 'Thhalv10011374m.g' => 'esa', 'Thhalv10013482m.g' => 'esa', 'Thhalv10017801m.g' => 'esa', 'Thhalv10024983m.g' => 'esa', 'TPR.G12072' => 'tpr', 'TPR.G15769' => 'tpr', 'TPR.G16504' => 'tpr', 'TPR.G16506' => 'tpr', 'TPR.G24345' => 'tpr', 'TPR.G26666' => 'tpr', 'TPR.G27320' => 'tpr', 'TPR.G31819' => 'tpr', 'TPR.G38879' => 'tpr', 'TPR.G39015' => 'tpr', 'TPR.G8819' => 'tpr', 'TWI09G0924' => 'twi', 'TWI12G0811' => 'twi', 'TWI12G1294' => 'twi', 'TWI31G0150' => 'twi', 'TWI36G1262' => 'twi', 'TWI38G1287' => 'twi', 'TWI38G1633' => 'twi', 'TWI38G1982' => 'twi', 'TWI39G0116' => 'twi', 'TWI60G1011' => 'twi', 'TWI63G0171' => 'twi', 'TWI73G0839' => 'twi', 'TWI79G1511' => 'twi', 'unitig_0.g915' => 'ugi', 'unitig_0.g916' => 'ugi', 'unitig_21.g20219' => 'ugi', 'unitig_21.g20416' => 'ugi', 'unitig_578.g16132' => 'ugi', 'unitig_578.g16718' => 'ugi', 'unitig_62.g23481' => 'ugi', 'unitig_744.g24535' => 'ugi', 'unitig_749.g13525' => 'ugi', 'vmacro01248' => 'vma', 'vmacro02290' => 'vma', 'vmacro10946' => 'vma', 'vmacro11865' => 'vma', 'vmacro12493' => 'vma', 'vmacro17322' => 'vma', 'vmacro21599' => 'vma', 'vmacro23041' => 'vma', 'VMungo0251G0004' => 'vmu', 'VMungo0251G2639' => 'vmu', 'VMungo0251G2967' => 'vmu', 'VMungo0540G0864' => 'vmu', 'VMungo0540G1569' => 'vmu', 'VMungo0647G0317' => 'vmu', 'VMungo0720G1373' => 'vmu', 'VMungo0720G1508' => 'vmu', 'VMungo1080G0485' => 'vmu', 'VMungo1215G3177' => 'vmu', 'Zm00001eb112600' => 'zma', 'Zm00001eb120220' => 'zma', 'Zm00001eb153240' => 'zma', 'Zm00001eb168880' => 'zma', 'Zm00001eb213920' => 'zma', 'Zm00001eb228280' => 'zma', 'Zm00001eb254580' => 'zma', 'Zm00001eb272180' => 'zma', 'Zm00001eb293190' => 'zma', 'Zm00001eb322930' => 'zma', 'Zm00001eb353360' => 'zma', 'Zm00001eb353390' => 'zma', 'Zm00001eb353430' => 'zma', 'Zm00001eb353440' => 'zma', 'Zm00001eb353780' => 'zma' ) $gf_id = 'HOM05D000499' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000499' ) $data_identifier = 'HOM05D000499' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 29, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 12, 'amhyb' => (int) 8, 'aly' => (int) 12, 'aox' => (int) 9, 'arhy' => (int) 26, 'ath' => (int) 8, 'atr' => (int) 7, 'acertr' => (int) 10, 'cqu' => (int) 15, 'bca' => (int) 29, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 11, 'cansat' => (int) 8, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 9, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 8, 'cpa' => (int) 10, 'csa' => (int) 7, 'camsi' => (int) 20, 'dca' => (int) 8, 'din' => (int) 12, 'dzi' => (int) 14, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 6, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 38, 'gra' => (int) 16, 'vvi' => (int) 8, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 5, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 11, 'lja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 11, 'mpo' => (int) 3, 'mbi' => (int) 14, 'mdo' => (int) 14, 'mtr' => (int) 8, 'cme' => (int) 9, 'egut' => (int) 9, 'ama' => (int) 11, 'nta' => (int) 17, 'nnu' => (int) 11, 'oeu' => (int) 18, 'osa' => (int) 8, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 6, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 9, 'rsi' => (int) 9, 'sbr' => (int) 10, 'sbo' => (int) 8, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 10, 'sas' => (int) 10, 'shi' => (int) 6, 'smo' => (int) 7, 'sly' => (int) 14, 'spe' => (int) 10, 'spa' => (int) 8, 'tar' => (int) 19, 'tha' => (int) 10, 'tca' => (int) 8, 'esa' => (int) 8, 'tpr' => (int) 11, 'twi' => (int) 13, 'ugi' => (int) 9, 'vma' => (int) 8, 'vmu' => (int) 10, 'zma' => (int) 15 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb353780' $species_info = array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ) $local_species = 'shi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000499', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1066', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p29780' => 'bna', 'A02p33180' => 'bna', 'A03p16470' => 'bna', 'A03p66010' => 'bna', 'A04p25970' => 'bna', 'A06p01270' => 'bna', 'A06p46080' => 'bna', 'A07p11400' => 'bna', 'A08p01840' => 'bna', 'A08p08230' => 'bna', 'A08p25740' => 'bna', 'A09p32070' => 'bna', 'A09p37830' => 'bna', 'A09p42840' => 'bna', 'A09p42850' => 'bna', 'Aa31LG10G2060' => 'aar', 'Aa31LG2G7410' => 'aar', 'Aa31LG6G10200' => 'aar', 'Aa31LG6G16680' => 'aar', 'Aa31LG6G8470' => 'aar', 'Aa31LG9G12730' => 'aar', 'Aa31LG9G13680' => 'aar', 'Aa31LG9G14920' => 'aar', 'Aa31LG9G6650' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4977' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5467' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3254' => 'aag', 'Actinidia02578' => 'ach', 'Actinidia07693' => 'ach', 'Actinidia08413' => 'ach', 'Actinidia08414' => 'ach', 'Actinidia15289' => 'ach', 'Actinidia19871' => 'ach', 'Actinidia21475' => 'ach', 'Actinidia22576' => 'ach', 'Actinidia28327' => 'ach', 'Actinidia32491' => 'ach', 'Actinidia39463' => 'ach', 'Actinidia39571' => 'ach', 'Ah.01g013750' => 'amhyb', 'Ah.01g023210' => 'amhyb', 'Ah.04g164850' => 'amhyb', 'Ah.05g178060' => 'amhyb', 'Ah.07g204270' => 'amhyb', 'Ah.07g208480' => 'amhyb', 'Ah.09g237410' => 'amhyb', 'Ah.14g089460' => 'amhyb', 'AL1G41790' => 'aly', 'AL1G49050' => 'aly', 'AL1G53810' => 'aly', 'AL1G61400' => 'aly', 'AL4G18580' => 'aly', 'AL5G12510' => 'aly', 'AL5G12540' => 'aly', 'AL6G43230' => 'aly', 'AL7G10370' => 'aly', 'AL7G19250' => 'aly', 'AL8G12240' => 'aly', 'AL8G18540' => 'aly', 'Aqoxy1G02409' => 'aox', 'Aqoxy2G03993' => 'aox', 'Aqoxy3G03357' => 'aox', 'Aqoxy4G00785' => 'aox', 'Aqoxy5G02598' => 'aox', 'Aqoxy6G00132' => 'aox', 'Aqoxy7G01776' => 'aox', 'Aqoxy7G02316' => 'aox', 'Aqoxy7G03973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.12AFKW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B8730' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27IQR1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3F75VG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3RE0GA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41TCQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.527VTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FIR39' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5W8UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DA38EV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ63HS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H1I32C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HC27T5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4M8AP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7N3CZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9UVDZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LS1NQA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT1D4B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SKC4TM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCFV76' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF9Q1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQWD9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1ZM88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WE07RT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YCK7VH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJE6Q6' => 'arhy', 'AT1G28240' => 'ath', 'AT1G34550' => 'ath', 'AT1G53040' => 'ath', 'AT2G02910' => 'ath', 'AT4G09630' => 'ath', 'AT4G38500' => 'ath', 'AT5G42660' => 'ath', 'AT5G46220' => 'ath', 'ATR0152G026' => 'atr', 'ATR0564G343' => 'atr', 'ATR0706G151' => 'atr', 'ATR0733G207' => 'atr', 'ATR0751G234' => 'atr', 'ATR0807G048' => 'atr', 'ATR1091G084' => 'atr', 'Atru.chr10.1229' => 'acertr', 'Atru.chr10.1230' => 'acertr', 'Atru.chr10.1874' => 'acertr', 'Atru.chr11.1808' => 'acertr', 'Atru.chr13.1795' => 'acertr', 'Atru.chr13.570' => 'acertr', 'Atru.chr2.2608' => 'acertr', 'Atru.chr2.2609' => 'acertr', 'Atru.chr5.3428' => 'acertr', 'Atru.chr8.1171' => 'acertr', 'AUR62004651' => 'cqu', 'AUR62008675' => 'cqu', 'AUR62010014' => 'cqu', 'AUR62013004' => 'cqu', 'AUR62014825' => 'cqu', 'AUR62015015' => 'cqu', 'AUR62015151' => 'cqu', 'AUR62017020' => 'cqu', 'AUR62019422' => 'cqu', 'AUR62023570' => 'cqu', 'AUR62025571' => 'cqu', 'AUR62029098' => 'cqu', 'AUR62033863' => 'cqu', 'AUR62034296' => 'cqu', 'AUR62040075' => 'cqu', 'BcaB02g07334' => 'bca', 'BcaB02g10575' => 'bca', 'BcaB03g12119' => 'bca', 'BcaB03g12120' => 'bca', 'BcaB03g13945' => 'bca', 'BcaB04g17123' => 'bca', 'BcaB04g17867' => 'bca', 'BcaB04g19839' => 'bca', 'BcaB07g30317' => 'bca', 'BcaB07g32432' => 'bca', 'BcaB07g33362' => 'bca', 'BcaB08g36611' => 'bca', 'BcaC01g00028' => 'bca', 'BcaC01g01356' => 'bca', 'BcaC01g02034' => 'bca', 'BcaC01g06051' => 'bca', 'BcaC03g16839' => 'bca', 'BcaC03g17176' => 'bca', 'BcaC05g26829' => 'bca', 'BcaC06g31490' => 'bca', 'BcaC06g35344' => 'bca', 'BcaC06g36570' => 'bca', 'BcaC07g37537' => 'bca', 'BcaC08g43491' => 'bca', 'BcaC08g43773' => 'bca', 'BcaNung00234' => 'bca', 'BcaNung01982' => 'bca', 'BcaNung03707' => 'bca', 'BcaNung06454' => 'bca', 'BolC2t10762H' => 'bol', 'BolC2t11191H' => 'bol', 'BolC3t14322H' => 'bol', 'BolC3t19747H' => 'bol', 'BolC3t21425H' => 'bol', 'BolC4t27800H' => 'bol', 'BolC5t31423H' => 'bol', 'BolC6t35951H' => 'bol', 'BolC6t36282H' => 'bol', 'BolC7t40678H' => 'bol', 'BolC7t40679H' => 'bol', 'BolC7t42222H' => 'bol', 'BolC7t43492H' => 'bol', 'BolC7t46785H' => 'bol', 'BolC8t47853H' => 'bol', 'BolC9t56805H' => 'bol', 'BraA02t08000Z' => 'bra', 'BraA02t08341Z' => 'bra', 'BraA03t10936Z' => 'bra', 'BraA03t15657Z' => 'bra', 'BraA04t18100Z' => 'bra', 'BraA05t20523Z' => 'bra', 'BraA06t23353Z' => 'bra', 'BraA06t27473Z' => 'bra', 'BraA06t27769Z' => 'bra', 'BraA07t28928Z' => 'bra', 'BraA08t32236Z' => 'bra', 'BraA08t32841Z' => 'bra', 'BraA08t34524Z' => 'bra', 'BraA09t38742Z' => 'bra', 'BraA09t39295Z' => 'bra', 'C02p47180' => 'bna', 'C02p50990' => 'bna', 'C03p19360' => 'bna', 'C03p74950' => 'bna', 'C03p91000' => 'bna', 'C04p63260' => 'bna', 'C05p27050' => 'bna', 'C06p08750' => 'bna', 'C06p11490' => 'bna', 'C07p02820' => 'bna', 'C07p17180' => 'bna', 'C07p29440' => 'bna', 'C07p63730' => 'bna', 'C09p39260' => 'bna', 'CAN.G1164.34' => 'can', 'CAN.G1164.39' => 'can', 'CAN.G1530.3' => 'can', 'CAN.G162.61' => 'can', 'CAN.G176.6' => 'can', 'CAN.G289.49' => 'can', 'CAN.G370.21' => 'can', 'CAN.G370.22' => 'can', 'CAN.G371.117' => 'can', 'CAN.G58.37' => 'can', 'CAN.G588.98' => 'can', 'CANSAT21G2266' => 'cansat', 'CANSAT25G2799' => 'cansat', 'CANSAT35G0862' => 'cansat', 'CANSAT35G1704' => 'cansat', 'CANSAT35G1760' => 'cansat', 'CANSAT56G3971' => 'cansat', 'CANSAT56G4116' => 'cansat', 'CANSAT80G1259' => 'cansat', 'CARHR027730' => 'chi', 'CARHR033880' => 'chi', 'CARHR043270' => 'chi', 'CARHR145330' => 'chi', 'CARHR145340' => 'chi', 'CARHR175570' => 'chi', 'CARHR181570' => 'chi', 'CARHR258470' => 'chi', 'CARHR260490' => 'chi', 'CARHR294220' => 'chi', 'Carub.0001s2668' => 'cru', 'Carub.0001s3257' => 'cru', 'Carub.0001s4220' => 'cru', 'Carub.0005s0179' => 'cru', 'Carub.0006s2807' => 'cru', 'Carub.0007s0039' => 'cru', 'Carub.0008s0169' => 'cru', 'Carub.0008s0636' => 'cru', 'Ca_00338_v3' => 'car', 'Ca_00542_v3' => 'car', 'Ca_01844_v3' => 'car', 'Ca_10611_v3' => 'car', 'Ca_13326_v3' => 'car', 'Ca_17944_v3' => 'car', 'Ca_18546_v3' => 'car', 'Ca_24219_v3' => 'car', 'Ca_29972_v3' => 'car', 'CBR_g3681' => 'cbr', 'CBR_g40021' => 'cbr', 'Cc01_g08140' => 'ccan', 'Cc02_g13410' => 'ccan', 'Cc02_g37480' => 'ccan', 'Cc05_g12030' => 'ccan', 'Cc09_g03370' => 'ccan', 'Cc09_g10300' => 'ccan', 'Cc10_g03530' => 'ccan', 'Cc10_g11380' => 'ccan', 'CDE01G0176' => 'cde', 'CDE02G0675' => 'cde', 'CDE02G0942' => 'cde', 'CDE02G1153' => 'cde', 'CDE02G4177' => 'cde', 'CDE04G2117' => 'cde', 'CDE04G2736' => 'cde', 'CDE08G1161' => 'cde', 'CDE09G1238' => 'cde', 'Cfa000467' => 'cfa', 'Cfa000947' => 'cfa', 'Cfa004969' => 'cfa', 'Cfa005284' => 'cfa', 'Cfa008993' => 'cfa', 'Cfa018187' => 'cfa', 'Cfa018454' => 'cfa', 'Cfa020585' => 'cfa', 'Ciclev10000424m.g' => 'ccl', 'Ciclev10003605m.g' => 'ccl', 'Ciclev10007828m.g' => 'ccl', 'Ciclev10014620m.g' => 'ccl', 'Ciclev10015169m.g' => 'ccl', 'Ciclev10018291m.g' => 'ccl', 'Ciclev10028256m.g' => 'ccl', 'Ciclev10033822m.g' => 'ccl', 'CiPaw.05G060300' => 'cil', 'CiPaw.05G085000' => 'cil', 'CiPaw.06G083700' => 'cil', 'CiPaw.06G120300' => 'cil', 'CiPaw.09G060500' => 'cil', 'CiPaw.09G123800' => 'cil', 'CiPaw.11G169700' => 'cil', 'CiPaw.12G118300' => 'cil', 'CiPaw.15G071000' => 'cil', 'CiPaw.15G081900' => 'cil', 'ClCG01G024610' => 'cla', 'ClCG03G006070' => 'cla', 'ClCG05G019250' => 'cla', 'ClCG09G009500' => 'cla', 'ClCG11G008200' => 'cla', 'ClCG11G018080' => 'cla', 'COL.COLO4_17373' => 'col', 'COL.COLO4_22994' => 'col', 'COL.COLO4_26389' => 'col', 'COL.COLO4_27170' => 'col', 'COL.COLO4_31074' => 'col', 'COL.COLO4_31465' => 'col', 'COL.COLO4_36438' => 'col', 'COL.COLO4_36439' => 'col', 'Cpa.g.c38781' => 'cpa', 'Cpa.g.sc128.12' => 'cpa', 'Cpa.g.sc166.7' => 'cpa', 'Cpa.g.sc166.8' => 'cpa', 'Cpa.g.sc20.111' => 'cpa', 'Cpa.g.sc27.31' => 'cpa', 'Cpa.g.sc64.36' => 'cpa', 'Cpa.g.sc64.37' => 'cpa', 'Cpa.g.sc66.49' => 'cpa', 'Cpa.g.sc80.64' => 'cpa', 'CsaV3_1G012320' => 'csa', 'CsaV3_2G008480' => 'csa', 'CsaV3_2G033450' => 'csa', 'CsaV3_3G044830' => 'csa', 'CsaV3_4G033710' => 'csa', 'CsaV3_6G051730' => 'csa', 'CsaV3_7G025350' => 'csa', 'CSS0001067' => 'camsi', 'CSS0005996' => 'camsi', 'CSS0006590' => 'camsi', 'CSS0009673' => 'camsi', 'CSS0010201' => 'camsi', 'CSS0010549' => 'camsi', 'CSS0011364' => 'camsi', 'CSS0014473' => 'camsi', 'CSS0014961' => 'camsi', 'CSS0020191' => 'camsi', 'CSS0021165' => 'camsi', 'CSS0022306' => 'camsi', 'CSS0030591' => 'camsi', 'CSS0030696' => 'camsi', 'CSS0032653' => 'camsi', 'CSS0037487' => 'camsi', 'CSS0041102' => 'camsi', 'CSS0041261' => 'camsi', 'CSS0046246' => 'camsi', 'CSS0049256' => 'camsi', 'DCAR_004075' => 'dca', 'DCAR_011538' => 'dca', 'DCAR_019553' => 'dca', 'DCAR_020952' => 'dca', 'DCAR_021739' => 'dca', 'DCAR_027407' => 'dca', 'DCAR_027913' => 'dca', 'DCAR_028066' => 'dca', 'Dinv05899' => 'din', 'Dinv07563' => 'din', 'Dinv08010' => 'din', 'Dinv14125' => 'din', 'Dinv20172' => 'din', 'Dinv30743' => 'din', 'Dinv31229' => 'din', 'Dinv34162' => 'din', 'Dinv36028' => 'din', 'Dinv39368' => 'din', 'Dinv40565' => 'din', 'Dinv41706' => 'din', 'Duzib052G0089' => 'dzi', 'Duzib116G0641' => 'dzi', 'Duzib132G0069' => 'dzi', 'Duzib132G1219' => 'dzi', 'Duzib147G0278' => 'dzi', 'Duzib160G0480' => 'dzi', 'Duzib170G0661' => 'dzi', 'Duzib177G0591' => 'dzi', 'Duzib187G1353' => 'dzi', 'Duzib192G0858' => 'dzi', 'Duzib192G0883' => 'dzi', 'Duzib213G0506' => 'dzi', 'Duzib235G0289' => 'dzi', 'Duzib251G0422' => 'dzi', 'ECA232G3898' => 'eca', 'ECA233G5950' => 'eca', 'ECA234G1699' => 'eca', 'ECA234G2421' => 'eca', 'ECA236G0426' => 'eca', 'ECA236G4331' => 'eca', 'ECA248G2573' => 'eca', 'EL10Ac1g00077' => 'bvu', 'EL10Ac1g01746' => 'bvu', 'EL10Ac2g03464' => 'bvu', 'EL10Ac4g08176' => 'bvu', 'EL10Ac7g17521' => 'bvu', 'EL10Ac8g20386' => 'bvu', 'EL10Ac9g21343' => 'bvu', 'EL10Ac9g22688' => 'bvu', 'Eucgr.B03434' => 'egr', 'Eucgr.D00618' => 'egr', 'Eucgr.E02395' => 'egr', 'Eucgr.F01129' => 'egr', 'Eucgr.F02622' => 'egr', 'Eucgr.F04207' => 'egr', 'FAN01G0570' => 'fan', 'FAN03G3351' => 'fan', 'FAN06G3702' => 'fan', 'FAN07G2149' => 'fan', 'FAN10G3758' => 'fan', 'FAN11G1170' => 'fan', 'FAN11G2050' => 'fan', 'FAN11G2724' => 'fan', 'FAN12G1700' => 'fan', 'FAN12G2028' => 'fan', 'FAN15G1160' => 'fan', 'FAN15G3063' => 'fan', 'FAN16G2540' => 'fan', 'FAN16G3077' => 'fan', 'FAN16G3624' => 'fan', 'FAN17G0221' => 'fan', 'FAN20G2492' => 'fan', 'FAN20G2905' => 'fan', 'FAN21G0548' => 'fan', 'FAN21G1300' => 'fan', 'FAN22G0077' => 'fan', 'FAN22G1315' => 'fan', 'FAN24G1280' => 'fan', 'FAN24G1445' => 'fan', 'FAN24G3527' => 'fan', 'FAN25G0464' => 'fan', 'FAN25G2885' => 'fan', 'FAN25G3270' => 'fan', 'FAN27G1101' => 'fan', 'FAN27G2846' => 'fan', 'FAN27G3524' => 'fan', 'FvH4_2g11770' => 'fve', 'FvH4_2g15630' => 'fve', 'FvH4_3g05570' => 'fve', 'FvH4_3g09110' => 'fve', 'FvH4_3g19940' => 'fve', 'FvH4_4g04821' => 'fve', 'FvH4_4g31480' => 'fve', 'FvH4_7g01740' => 'fve', 'Glyma.05G130400' => 'gma', 'Glyma.05G156400' => 'gma', 'Glyma.07G197000' => 'gma', 'Glyma.08G085151' => 'gma', 'Glyma.08G114500' => 'gma', 'Glyma.08G300400' => 'gma', 'Glyma.10G215800' => 'gma', 'Glyma.12G224400' => 'gma', 'Glyma.13G179300' => 'gma', 'Glyma.13G218151' => 'gma', 'Glyma.13G238800' => 'gma', 'Glyma.13G276900' => 'gma', 'Glyma.14G078200' => 'gma', 'Glyma.15G074500' => 'gma', 'Glyma.15G094100' => 'gma', 'Glyma.17G247200' => 'gma', 'Glyma.18G120100' => 'gma', 'Glyma.20G176000' => 'gma', 'Gohir.A01G063600' => 'ghi', 'Gohir.A01G170301' => 'ghi', 'Gohir.A02G060500' => 'ghi', 'Gohir.A05G133850' => 'ghi', 'Gohir.A05G161400' => 'ghi', 'Gohir.A06G012900' => 'ghi', 'Gohir.A06G035901' => 'ghi', 'Gohir.A06G127100' => 'ghi', 'Gohir.A06G210500' => 'ghi', 'Gohir.A08G008650' => 'ghi', 'Gohir.A09G072700' => 'ghi', 'Gohir.A09G088301' => 'ghi', 'Gohir.A10G040600' => 'ghi', 'Gohir.A12G036300' => 'ghi', 'Gohir.A12G143350' => 'ghi', 'Gohir.A12G165500' => 'ghi', 'Gohir.A13G145700' => 'ghi', 'Gohir.D01G050000' => 'ghi', 'Gohir.D01G051366' => 'ghi', 'Gohir.D01G161350' => 'ghi', 'Gohir.D02G065900' => 'ghi', 'Gohir.D05G164200' => 'ghi', 'Gohir.D05G355500' => 'ghi', 'Gohir.D06G010400' => 'ghi', 'Gohir.D06G111250' => 'ghi', 'Gohir.D06G132000' => 'ghi', 'Gohir.D06G210500' => 'ghi', 'Gohir.D07G165675' => 'ghi', 'Gohir.D08G062240' => 'ghi', 'Gohir.D08G086101' => 'ghi', 'Gohir.D08G138060' => 'ghi', 'Gohir.D09G072300' => 'ghi', 'Gohir.D10G041400' => 'ghi', 'Gohir.D11G191020' => 'ghi', 'Gohir.D11G212066' => 'ghi', 'Gohir.D12G036300' => 'ghi', 'Gohir.D12G168600' => 'ghi', 'Gohir.D13G150600' => 'ghi', 'Gorai.001G057300' => 'gra', 'Gorai.002G069900' => 'gra', 'Gorai.002G200000' => 'gra', 'Gorai.003G067600' => 'gra', 'Gorai.005G074800' => 'gra', 'Gorai.006G087300' => 'gra', 'Gorai.008G037500' => 'gra', 'Gorai.008G181400' => 'gra', 'Gorai.009G169400' => 'gra', 'Gorai.009G387900' => 'gra', 'Gorai.010G013300' => 'gra', 'Gorai.010G153800' => 'gra', 'Gorai.010G255800' => 'gra', 'Gorai.011G043700' => 'gra', 'Gorai.011G198900' => 'gra', 'Gorai.013G168400' => 'gra', 'GSVIVG01005212001' => 'vvi', 'GSVIVG01006163001' => 'vvi', 'GSVIVG01009625001' => 'vvi', 'GSVIVG01014338001' => 'vvi', 'GSVIVG01020005001' => 'vvi', 'GSVIVG01021450001' => 'vvi', 'GSVIVG01023975001' => 'vvi', 'GSVIVG01034490001' => 'vvi', 'HanXRQChr04g0112071' => 'han', 'HanXRQChr05g0131151' => 'han', 'HanXRQChr09g0262371' => 'han', 'HanXRQChr09g0268401' => 'han', 'HanXRQChr10g0279241' => 'han', 'HanXRQChr10g0297961' => 'han', 'HanXRQChr11g0326231' => 'han', 'HanXRQChr11g0328471' => 'han', 'HanXRQChr16g0507941' => 'han', 'HanXRQChr17g0560211' => 'han', 'Haze_02108' => 'cav', 'Haze_02428' => 'cav', 'Haze_05593' => 'cav', 'Haze_06448' => 'cav', 'Haze_09427' => 'cav', 'Haze_12022' => 'cav', 'Haze_17612' => 'cav', 'Haze_17928' => 'cav', 'Hma1.2p1_0032F.1_g019250' => 'hma', 'Hma1.2p1_0163F.1_g072690' => 'hma', 'Hma1.2p1_0265F.1_g106710' => 'hma', 'Hma1.2p1_0286F.1_g113970' => 'hma', 'Hma1.2p1_0363F.1_g136640' => 'hma', 'Hma1.2p1_0584F.1_g183470' => 'hma', 'Hma1.2p1_0885F.1_g232570' => 'hma', 'HPP92_006022' => 'vpl', 'HPP92_007320' => 'vpl', 'HPP92_011521' => 'vpl', 'HPP92_019387' => 'vpl', 'HPP92_024038' => 'vpl', 'Hund05891' => 'sun', 'Hund06450' => 'sun', 'Hund12053' => 'sun', 'Hund16800' => 'sun', 'Hund21222' => 'sun', 'Hund22896' => 'sun', 'Hund23746' => 'sun', 'Hund27083' => 'sun', 'Lalb_Chr02g0141831' => 'lal', 'Lalb_Chr02g0141841' => 'lal', 'Lalb_Chr05g0220411' => 'lal', 'Lalb_Chr06g0162081' => 'lal', 'Lalb_Chr09g0327651' => 'lal', 'Lalb_Chr13g0295051' => 'lal', 'Lalb_Chr15g0086801' => 'lal', 'Lalb_Chr16g0383781' => 'lal', 'Lalb_Chr16g0383791' => 'lal', 'Lalb_Chr18g0055441' => 'lal', 'Lalb_Chr18g0059611' => 'lal', 'Lalb_Chr20g0109661' => 'lal', 'Lalb_Chr20g0109831' => 'lal', 'Lalb_Chr20g0121871' => 'lal', 'Lalb_Chr22g0355361' => 'lal', 'Lalb_Chr25g0286371' => 'lal', 'Lj1A1187G43' => 'lonja', 'Lj1A1205T50' => 'lonja', 'Lj1A800G33' => 'lonja', 'Lj1C1187T7' => 'lonja', 'Lj1C843T11' => 'lonja', 'Lj1g0010940' => 'lja', 'Lj2A288T69' => 'lonja', 'Lj3g0024276' => 'lja', 'Lj4A47T76' => 'lonja', 'Lj4g0005805' => 'lja', 'Lj4g0006097' => 'lja', 'Lj4g0008528' => 'lja', 'Lj4g0024907' => 'lja', 'Lj5g0012472' => 'lja', 'Lj5g0018648' => 'lja', 'Lj6C789G1' => 'lonja', 'Lj6g0004000' => 'lja', 'Lj7A292G67' => 'lonja', 'Lj7A292T64' => 'lonja', 'Lj9A400T58' => 'lonja', 'Lsat_1_v5_gn_1_126181' => 'lsa', 'Lsat_1_v5_gn_4_123041' => 'lsa', 'Lsat_1_v5_gn_4_133620' => 'lsa', 'Lsat_1_v5_gn_4_53221' => 'lsa', 'Lsat_1_v5_gn_4_71961' => 'lsa', 'Lsat_1_v5_gn_7_105241' => 'lsa', 'Lsat_1_v5_gn_7_21361' => 'lsa', 'Lsat_1_v5_gn_7_28860' => 'lsa', 'Lsat_1_v5_gn_7_31260' => 'lsa', 'Lsat_1_v5_gn_8_52801' => 'lsa', 'Manes.02G191400' => 'mes', 'Manes.03G110100' => 'mes', 'Manes.04G071100' => 'mes', 'Manes.05G100500' => 'mes', 'Manes.05G164700' => 'mes', 'Manes.15G087000' => 'mes', 'Manes.15G121500' => 'mes', 'Manes.16G028300' => 'mes', 'Manes.17G046100' => 'mes', 'Manes.17G069800' => 'mes', 'Manes.18G100500' => 'mes', 'Mapoly0002s0109' => 'mpo', 'Mapoly0024s0007' => 'mpo', 'Mapoly0089s0032' => 'mpo', 'MBI04_g42241_MAGBIO' => 'mbi', 'MBI05_g11988_MAGBIO' => 'mbi', 'MBI05_g35452_MAGBIO' => 'mbi', 'MBI07_g30179_MAGBIO' => 'mbi', 'MBI07_g35859_MAGBIO' => 'mbi', 'MBI07_g35860_MAGBIO' => 'mbi', 'MBI07_g37166_MAGBIO' => 'mbi', 'MBI08_g18172_MAGBIO' => 'mbi', 'MBI09_g08441_MAGBIO' => 'mbi', 'MBI13_g01676_MAGBIO' => 'mbi', 'MBI14_g42955_MAGBIO' => 'mbi', 'MBI16_g13161_MAGBIO' => 'mbi', 'MBI17_g27204_MAGBIO' => 'mbi', 'MBI19_g21595_MAGBIO' => 'mbi', 'MD00G1148400' => 'mdo', 'MD02G1301200' => 'mdo', 'MD03G1227800' => 'mdo', 'MD05G1041100' => 'mdo', 'MD05G1124800' => 'mdo', 'MD05G1284000' => 'mdo', 'MD05G1338800' => 'mdo', 'MD05G1338900' => 'mdo', 'MD07G1022800' => 'mdo', 'MD10G1047500' => 'mdo', 'MD10G1127500' => 'mdo', 'MD10G1262300' => 'mdo', 'MD10G1293800' => 'mdo', 'MD16G1074300' => 'mdo', 'Medtr1g021670' => 'mtr', 'Medtr1g096320' => 'mtr', 'Medtr2g013690' => 'mtr', 'Medtr2g019450' => 'mtr', 'Medtr2g085170' => 'mtr', 'Medtr4g088785' => 'mtr', 'Medtr8g055930' => 'mtr', 'Medtr8g085850' => 'mtr', 'MELO3C002605.2' => 'cme', 'MELO3C003891.2' => 'cme', 'MELO3C004012.2' => 'cme', 'MELO3C007134.2' => 'cme', 'MELO3C008118.2' => 'cme', 'MELO3C016700.2' => 'cme', 'MELO3C024127.2' => 'cme', 'MELO3C033361.2' => 'cme', 'MELO3C033362.2' => 'cme', 'Migut.C00430' => 'egut', 'Migut.C01246' => 'egut', 'Migut.E00101' => 'egut', 'Migut.H01486' => 'egut', 'Migut.H01939' => 'egut', 'Migut.K00360' => 'egut', 'Migut.M00910' => 'egut', 'Migut.M01139' => 'egut', 'Migut.N02677' => 'egut', 'MSTRG.13252' => 'ama', 'MSTRG.14701' => 'ama', 'MSTRG.1521' => 'ama', 'MSTRG.15884' => 'ama', 'MSTRG.16242' => 'ama', 'MSTRG.22285' => 'ama', 'MSTRG.22444' => 'ama', 'MSTRG.2349' => 'ama', 'MSTRG.26308' => 'ama', 'MSTRG.28296' => 'ama', 'MSTRG.9895' => 'ama', 'Nitab4.5_0000110g0060' => 'nta', 'Nitab4.5_0000420g0130' => 'nta', 'Nitab4.5_0000422g0030' => 'nta', 'Nitab4.5_0000560g0180' => 'nta', 'Nitab4.5_0000703g0100' => 'nta', 'Nitab4.5_0000786g0200' => 'nta', 'Nitab4.5_0001336g0020' => 'nta', 'Nitab4.5_0001796g0030' => 'nta', 'Nitab4.5_0003348g0060' => 'nta', 'Nitab4.5_0003698g0040' => 'nta', 'Nitab4.5_0003942g0090' => 'nta', 'Nitab4.5_0004775g0070' => 'nta', 'Nitab4.5_0004864g0030' => 'nta', 'Nitab4.5_0005615g0020' => 'nta', 'Nitab4.5_0009288g0030' => 'nta', 'Nitab4.5_0009341g0010' => 'nta', 'Nitab4.5_0009535g0010' => 'nta', 'Nn1g03995' => 'nnu', 'Nn1g04100' => 'nnu', 'Nn1g06530' => 'nnu', 'Nn3g16404' => 'nnu', 'Nn3g17212' => 'nnu', 'Nn3g20776' => 'nnu', 'Nn3g21923' => 'nnu', 'Nn5g27737' => 'nnu', 'Nn5g29461' => 'nnu', 'Nn7g38355' => 'nnu', 'Nn8g39873' => 'nnu', 'Oeu000548.2' => 'oeu', 'Oeu004672.1' => 'oeu', 'Oeu015605.2' => 'oeu', 'Oeu016092.1' => 'oeu', 'Oeu017879.3' => 'oeu', 'Oeu024910.1' => 'oeu', 'Oeu028965.1' => 'oeu', 'Oeu031269.1' => 'oeu', 'Oeu031270.1' => 'oeu', 'Oeu032535.1' => 'oeu', 'Oeu034151.1' => 'oeu', 'Oeu034152.1' => 'oeu', 'Oeu034588.2' => 'oeu', 'Oeu050846.1' => 'oeu', 'Oeu050849.2' => 'oeu', 'Oeu051063.2' => 'oeu', 'Oeu052368.1' => 'oeu', 'Oeu052370.1' => 'oeu', 'Os01g0210400' => 'osa', 'Os01g0304300' => 'osa', 'Os01g0749100' => 'osa', 'Os02g0745800' => 'osa', 'Os03g0769050' => 'osa', 'Os05g0531500' => 'osa', 'Os06g0724300' => 'osa', 'Os11g0198100' => 'osa', 'Peaxi162Scf00069g01425' => 'pax', 'Peaxi162Scf00280g00811' => 'pax', 'Peaxi162Scf00310g00615' => 'pax', 'Peaxi162Scf00362g00542' => 'pax', 'Peaxi162Scf00461g00310' => 'pax', 'Peaxi162Scf00530g00118' => 'pax', 'Peaxi162Scf00541g00057' => 'pax', 'Peaxi162Scf00661g00017' => 'pax', 'Peaxi162Scf00926g00027' => 'pax', 'Peaxi162Scf01064g00263' => 'pax', 'Peaxi162Scf01211g00135' => 'pax', 'PGR004G2336' => 'pgr', 'PGR042G0327' => 'pgr', 'PGR042G1957' => 'pgr', 'PGR042G2003' => 'pgr', 'PGR042G3929' => 'pgr', 'PGR083G1137' => 'pgr', 'PGR083G1364' => 'pgr', 'PGSC0003DMG400003381' => 'stu', 'PGSC0003DMG400003417' => 'stu', 'PGSC0003DMG400008981' => 'stu', 'PGSC0003DMG400012417' => 'stu', 'PGSC0003DMG400012823' => 'stu', 'PGSC0003DMG400016885' => 'stu', 'PGSC0003DMG400022812' => 'stu', 'PGSC0003DMG400029726' => 'stu', 'PGSC0003DMG401009243' => 'stu', 'PGSC0003DMG401031505' => 'stu', 'PGSC0003DMG402031505' => 'stu', 'Phvul.001G017600' => 'pvu', 'Phvul.002G193500' => 'pvu', 'Phvul.002G228900' => 'pvu', 'Phvul.002G236800' => 'pvu', 'Phvul.003G049500' => 'pvu', 'Phvul.005G072000' => 'pvu', 'Phvul.006G164800' => 'pvu', 'Phvul.006G185100' => 'pvu', 'Phvul.007G090000' => 'pvu', 'Potri.001G399800' => 'ptr', 'Potri.002G149900' => 'ptr', 'Potri.004G044100' => 'ptr', 'Potri.004G177600' => 'ptr', 'Potri.009G138000' => 'ptr', 'Potri.010G094000' => 'ptr', 'Potri.011G053000' => 'ptr', 'Potri.011G119300' => 'ptr', 'Potri.013G113700' => 'ptr', 'Potri.018G107800' => 'ptr', 'Potri.019G084100' => 'ptr', 'Pp3c14_23720' => 'ppa', 'Pp3c16_6340' => 'ppa', 'Pp3c23_13420' => 'ppa', 'Pp3c24_2740' => 'ppa', 'Pp3c25_860' => 'ppa', 'Pp3c8_21750' => 'ppa', 'Prupe.1G273000' => 'ppe', 'Prupe.1G273700' => 'ppe', 'Prupe.1G274100' => 'ppe', 'Prupe.2G023300' => 'ppe', 'Prupe.4G048000' => 'ppe', 'Prupe.4G080400' => 'ppe', 'Prupe.4G181200' => 'ppe', 'Prupe.8G056900' => 'ppe', 'Prupe.8G168700' => 'ppe', 'Psat1g189080' => 'psa', 'Psat1g204760' => 'psa', 'Psat4g175560' => 'psa', 'Psat4g177720' => 'psa', 'Psat5g244240' => 'psa', 'Psat6g010720' => 'psa', 'Psat6g187200' => 'psa', 'Psat7g072040' => 'psa', 'PSO017G3501' => 'pso', 'PSO063G2148' => 'pso', 'PSO063G5608' => 'pso', 'PSO210G6392' => 'pso', 'PSO541G2319' => 'pso', 'PSO541G2836' => 'pso', 'PSO541G4012' => 'pso', 'PSO541G6253' => 'pso', 'PSO675G0580' => 'pso', 'PSO675G0856' => 'pso', 'PSO675G5635' => 'pso', 'PSO675G9157' => 'pso', 'PSO832G1660' => 'pso', 'PSO832G1969' => 'pso', 'QL02p007186' => 'qlo', 'QL02p033904' => 'qlo', 'QL03p064391' => 'qlo', 'QL05p040593' => 'qlo', 'QL05p058242' => 'qlo', 'QL08p021825' => 'qlo', 'QL11p004981' => 'qlo', 'RcHm_v2.0_Chr1g0318301' => 'rch', 'RcHm_v2.0_Chr4g0418501' => 'rch', 'RcHm_v2.0_Chr4g0439971' => 'rch', 'RcHm_v2.0_Chr5g0008541' => 'rch', 'RcHm_v2.0_Chr5g0014101' => 'rch', 'RcHm_v2.0_Chr5g0014131' => 'rch', 'RcHm_v2.0_Chr5g0033621' => 'rch', 'RcHm_v2.0_Chr6g0272041' => 'rch', 'RcHm_v2.0_Chr6g0278831' => 'rch', 'Rhsim02G0130400' => 'rsi', 'Rhsim02G0171100' => 'rsi', 'Rhsim05G0053000' => 'rsi', 'Rhsim05G0053100' => 'rsi', 'Rhsim06G0096500' => 'rsi', 'Rhsim06G0096600' => 'rsi', 'Rhsim06G0199100' => 'rsi', 'Rhsim12G0062300' => 'rsi', 'Rhsim12G0062800' => 'rsi', 'Sabra02G0118600' => 'sbr', 'Sabra04G0027300' => 'sbr', 'Sabra04G0119500' => 'sbr', 'Sabra08G0112500' => 'sbr', 'Sabra11G0036800' => 'sbr', 'Sabra11G0103800' => 'sbr', 'Sabra13G0096300' => 'sbr', 'Sabra16G0262300' => 'sbr', 'Sabra18G0091700' => 'sbr', 'Sabra19G0095400' => 'sbr', 'SalBow6G3080' => 'sbo', 'SalBow7G1157' => 'sbo', 'SalBow7G2123' => 'sbo', 'SalBow7G2285' => 'sbo', 'SalBow7G3537' => 'sbo', 'SalBow8G2947' => 'sbo', 'SalBow8G4463' => 'sbo', 'SalBow8G5466' => 'sbo', 'Sc01g0001750' => 'sci', 'Sc02g0006640' => 'sci', 'Sc02g0006670' => 'sci', 'Sc04g0008220' => 'sci', 'Sc05g0006190' => 'sci', 'Sc08g0002760' => 'sci', 'Sc17g0006170' => 'sci', 'Sc22g0002050' => 'sci', 'Sc23g0001190' => 'sci', 'Sc24g0000980' => 'sci', 'Sed0006245' => 'sed', 'Sed0007543' => 'sed', 'Sed0009411' => 'sed', 'Sed0010765' => 'sed', 'Sed0012944' => 'sed', 'Sed0014682' => 'sed', 'Sed0016174' => 'sed', 'Sed0016796' => 'sed', 'Sed0020317' => 'sed', 'Sed0021467' => 'sed', 'SEGI_01316' => 'sgi', 'SEGI_03374' => 'sgi', 'SEGI_16265' => 'sgi', 'SEGI_18569' => 'sgi', 'SEGI_20351' => 'sgi', 'SEGI_26395' => 'sgi', 'SEGI_29469' => 'sgi', 'SEGI_34771' => 'sgi', 'SEGI_36769' => 'sgi', 'SEGI_37139' => 'sgi', 'SGA_v2.0_scaffold100G29687' => 'sas', 'SGA_v2.0_scaffold118G32472' => 'sas', 'SGA_v2.0_scaffold14G07051' => 'sas', 'SGA_v2.0_scaffold183G39845' => 'sas', 'SGA_v2.0_scaffold1G00174' => 'sas', 'SGA_v2.0_scaffold22G09714' => 'sas', 'SGA_v2.0_scaffold333G48992' => 'sas', 'SGA_v2.0_scaffold46G17491' => 'sas', 'SGA_v2.0_scaffold49G18294' => 'sas', 'SGA_v2.0_scaffold63G21658' => 'sas', 'SHI01741' => 'shi', 'SHI05771' => 'shi', 'SHI18077' => 'shi', 'SHI20525' => 'shi', 'SHI20527' => 'shi', 'SHI20528' => 'shi', 'SMO172G0185' => 'smo', 'SMO198G0020' => 'smo', 'SMO351G0006' => 'smo', 'SMO356G0118' => 'smo', 'SMO358G0296' => 'smo', 'SMO367G0079' => 'smo', 'SMO367G1277' => 'smo', 'Solyc01g014220.3' => 'sly', 'Solyc01g111770.2' => 'sly', 'Solyc02g078180.3' => 'sly', 'Solyc03g006430.3' => 'sly', 'Solyc03g006456.1' => 'sly', 'Solyc03g079860.2' => 'sly', 'Solyc04g079770.3' => 'sly', 'Solyc05g007430.4' => 'sly', 'Solyc07g063150.3' => 'sly', 'Solyc08g016620.3' => 'sly', 'Solyc09g057590.3' => 'sly', 'Solyc09g057600.1' => 'sly', 'Solyc10g009050.3' => 'sly', 'Solyc11g017420.2' => 'sly', 'Sopen01g053810' => 'spe', 'Sopen02g023040' => 'spe', 'Sopen03g002440' => 'spe', 'Sopen04g033350' => 'spe', 'Sopen05g003310' => 'spe', 'Sopen07g004050' => 'spe', 'Sopen07g031340' => 'spe', 'Sopen08g006990' => 'spe', 'Sopen10g004830' => 'spe', 'Sopen11g009370' => 'spe', 'Sp1g24450' => 'spa', 'Sp1g29670' => 'spa', 'Sp1g39600' => 'spa', 'Sp2g11080' => 'spa', 'Sp2g13970' => 'spa', 'Sp4g16130' => 'spa', 'Sp6g13080' => 'spa', 'Sp7g37270' => 'spa', 'TAR371G0065' => 'tar', 'TAR376G0340' => 'tar', 'TAR376G0435' => 'tar', 'TAR381G0002' => 'tar', 'TAR381G1236' => 'tar', 'TAR624G0055' => 'tar', 'TAR624G0324' => 'tar', 'TAR624G0696' => 'tar', 'TAR624G0906' => 'tar', 'TAR625G0107' => 'tar', 'TAR626G0015' => 'tar', 'TAR626G1356' => 'tar', 'TAR627G0888' => 'tar', 'TAR628G0399' => 'tar', 'TAR628G1327' => 'tar', 'TAR629G2831' => 'tar', 'TAR629G2874' => 'tar', 'TAR633G1432' => 'tar', 'TAR633G2771' => 'tar', 'THA.LOC104803394' => 'tha', 'THA.LOC104805153' => 'tha', 'THA.LOC104806784' => 'tha', 'THA.LOC104810473' => 'tha', 'THA.LOC104813100' => 'tha', 'THA.LOC104814215' => 'tha', 'THA.LOC104815554' => 'tha', 'THA.LOC104820544' => 'tha', 'THA.LOC104824754' => 'tha', 'THA.LOC104827717' => 'tha', 'Thecc.02G031400' => 'tca', 'Thecc.02G055900' => 'tca', 'Thecc.02G350800' => 'tca', 'Thecc.06G150900' => 'tca', 'Thecc.06G186600' => 'tca', 'Thecc.07G089600' => 'tca', 'Thecc.08G020400' => 'tca', 'Thecc.08G182100' => 'tca', 'Thhalv10000873m.g' => 'esa', 'Thhalv10004185m.g' => 'esa', 'Thhalv10006981m.g' => 'esa', 'Thhalv10007204m.g' => 'esa', 'Thhalv10011374m.g' => 'esa', 'Thhalv10013482m.g' => 'esa', 'Thhalv10017801m.g' => 'esa', 'Thhalv10024983m.g' => 'esa', 'TPR.G12072' => 'tpr', 'TPR.G15769' => 'tpr', 'TPR.G16504' => 'tpr', 'TPR.G16506' => 'tpr', 'TPR.G24345' => 'tpr', 'TPR.G26666' => 'tpr', 'TPR.G27320' => 'tpr', 'TPR.G31819' => 'tpr', 'TPR.G38879' => 'tpr', 'TPR.G39015' => 'tpr', 'TPR.G8819' => 'tpr', 'TWI09G0924' => 'twi', 'TWI12G0811' => 'twi', 'TWI12G1294' => 'twi', 'TWI31G0150' => 'twi', 'TWI36G1262' => 'twi', 'TWI38G1287' => 'twi', 'TWI38G1633' => 'twi', 'TWI38G1982' => 'twi', 'TWI39G0116' => 'twi', 'TWI60G1011' => 'twi', 'TWI63G0171' => 'twi', 'TWI73G0839' => 'twi', 'TWI79G1511' => 'twi', 'unitig_0.g915' => 'ugi', 'unitig_0.g916' => 'ugi', 'unitig_21.g20219' => 'ugi', 'unitig_21.g20416' => 'ugi', 'unitig_578.g16132' => 'ugi', 'unitig_578.g16718' => 'ugi', 'unitig_62.g23481' => 'ugi', 'unitig_744.g24535' => 'ugi', 'unitig_749.g13525' => 'ugi', 'vmacro01248' => 'vma', 'vmacro02290' => 'vma', 'vmacro10946' => 'vma', 'vmacro11865' => 'vma', 'vmacro12493' => 'vma', 'vmacro17322' => 'vma', 'vmacro21599' => 'vma', 'vmacro23041' => 'vma', 'VMungo0251G0004' => 'vmu', 'VMungo0251G2639' => 'vmu', 'VMungo0251G2967' => 'vmu', 'VMungo0540G0864' => 'vmu', 'VMungo0540G1569' => 'vmu', 'VMungo0647G0317' => 'vmu', 'VMungo0720G1373' => 'vmu', 'VMungo0720G1508' => 'vmu', 'VMungo1080G0485' => 'vmu', 'VMungo1215G3177' => 'vmu', 'Zm00001eb112600' => 'zma', 'Zm00001eb120220' => 'zma', 'Zm00001eb153240' => 'zma', 'Zm00001eb168880' => 'zma', 'Zm00001eb213920' => 'zma', 'Zm00001eb228280' => 'zma', 'Zm00001eb254580' => 'zma', 'Zm00001eb272180' => 'zma', 'Zm00001eb293190' => 'zma', 'Zm00001eb322930' => 'zma', 'Zm00001eb353360' => 'zma', 'Zm00001eb353390' => 'zma', 'Zm00001eb353430' => 'zma', 'Zm00001eb353440' => 'zma', 'Zm00001eb353780' => 'zma' ), 'gf_id' => 'HOM05D000499', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000499' ), 'data_identifier' => 'HOM05D000499', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000499', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1066', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p29780' => 'bna', 'A02p33180' => 'bna', 'A03p16470' => 'bna', 'A03p66010' => 'bna', 'A04p25970' => 'bna', 'A06p01270' => 'bna', 'A06p46080' => 'bna', 'A07p11400' => 'bna', 'A08p01840' => 'bna', 'A08p08230' => 'bna', 'A08p25740' => 'bna', 'A09p32070' => 'bna', 'A09p37830' => 'bna', 'A09p42840' => 'bna', 'A09p42850' => 'bna', 'Aa31LG10G2060' => 'aar', 'Aa31LG2G7410' => 'aar', 'Aa31LG6G10200' => 'aar', 'Aa31LG6G16680' => 'aar', 'Aa31LG6G8470' => 'aar', 'Aa31LG9G12730' => 'aar', 'Aa31LG9G13680' => 'aar', 'Aa31LG9G14920' => 'aar', 'Aa31LG9G6650' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4977' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5467' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3254' => 'aag', 'Actinidia02578' => 'ach', 'Actinidia07693' => 'ach', 'Actinidia08413' => 'ach', 'Actinidia08414' => 'ach', 'Actinidia15289' => 'ach', 'Actinidia19871' => 'ach', 'Actinidia21475' => 'ach', 'Actinidia22576' => 'ach', 'Actinidia28327' => 'ach', 'Actinidia32491' => 'ach', 'Actinidia39463' => 'ach', 'Actinidia39571' => 'ach', 'Ah.01g013750' => 'amhyb', 'Ah.01g023210' => 'amhyb', 'Ah.04g164850' => 'amhyb', 'Ah.05g178060' => 'amhyb', 'Ah.07g204270' => 'amhyb', 'Ah.07g208480' => 'amhyb', 'Ah.09g237410' => 'amhyb', 'Ah.14g089460' => 'amhyb', 'AL1G41790' => 'aly', 'AL1G49050' => 'aly', 'AL1G53810' => 'aly', 'AL1G61400' => 'aly', 'AL4G18580' => 'aly', 'AL5G12510' => 'aly', 'AL5G12540' => 'aly', 'AL6G43230' => 'aly', 'AL7G10370' => 'aly', 'AL7G19250' => 'aly', 'AL8G12240' => 'aly', 'AL8G18540' => 'aly', 'Aqoxy1G02409' => 'aox', 'Aqoxy2G03993' => 'aox', 'Aqoxy3G03357' => 'aox', 'Aqoxy4G00785' => 'aox', 'Aqoxy5G02598' => 'aox', 'Aqoxy6G00132' => 'aox', 'Aqoxy7G01776' => 'aox', 'Aqoxy7G02316' => 'aox', 'Aqoxy7G03973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.12AFKW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B8730' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27IQR1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3F75VG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3RE0GA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41TCQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.527VTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FIR39' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5W8UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DA38EV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ63HS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H1I32C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HC27T5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4M8AP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7N3CZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9UVDZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LS1NQA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT1D4B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SKC4TM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCFV76' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF9Q1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQWD9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1ZM88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WE07RT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YCK7VH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJE6Q6' => 'arhy', 'AT1G28240' => 'ath', 'AT1G34550' => 'ath', 'AT1G53040' => 'ath', 'AT2G02910' => 'ath', 'AT4G09630' => 'ath', 'AT4G38500' => 'ath', 'AT5G42660' => 'ath', 'AT5G46220' => 'ath', 'ATR0152G026' => 'atr', 'ATR0564G343' => 'atr', 'ATR0706G151' => 'atr', 'ATR0733G207' => 'atr', 'ATR0751G234' => 'atr', 'ATR0807G048' => 'atr', 'ATR1091G084' => 'atr', 'Atru.chr10.1229' => 'acertr', 'Atru.chr10.1230' => 'acertr', 'Atru.chr10.1874' => 'acertr', 'Atru.chr11.1808' => 'acertr', 'Atru.chr13.1795' => 'acertr', 'Atru.chr13.570' => 'acertr', 'Atru.chr2.2608' => 'acertr', 'Atru.chr2.2609' => 'acertr', 'Atru.chr5.3428' => 'acertr', 'Atru.chr8.1171' => 'acertr', 'AUR62004651' => 'cqu', 'AUR62008675' => 'cqu', 'AUR62010014' => 'cqu', 'AUR62013004' => 'cqu', 'AUR62014825' => 'cqu', 'AUR62015015' => 'cqu', 'AUR62015151' => 'cqu', 'AUR62017020' => 'cqu', 'AUR62019422' => 'cqu', 'AUR62023570' => 'cqu', 'AUR62025571' => 'cqu', 'AUR62029098' => 'cqu', 'AUR62033863' => 'cqu', 'AUR62034296' => 'cqu', 'AUR62040075' => 'cqu', 'BcaB02g07334' => 'bca', 'BcaB02g10575' => 'bca', 'BcaB03g12119' => 'bca', 'BcaB03g12120' => 'bca', 'BcaB03g13945' => 'bca', 'BcaB04g17123' => 'bca', 'BcaB04g17867' => 'bca', 'BcaB04g19839' => 'bca', 'BcaB07g30317' => 'bca', 'BcaB07g32432' => 'bca', 'BcaB07g33362' => 'bca', 'BcaB08g36611' => 'bca', 'BcaC01g00028' => 'bca', 'BcaC01g01356' => 'bca', 'BcaC01g02034' => 'bca', 'BcaC01g06051' => 'bca', 'BcaC03g16839' => 'bca', 'BcaC03g17176' => 'bca', 'BcaC05g26829' => 'bca', 'BcaC06g31490' => 'bca', 'BcaC06g35344' => 'bca', 'BcaC06g36570' => 'bca', 'BcaC07g37537' => 'bca', 'BcaC08g43491' => 'bca', 'BcaC08g43773' => 'bca', 'BcaNung00234' => 'bca', 'BcaNung01982' => 'bca', 'BcaNung03707' => 'bca', 'BcaNung06454' => 'bca', 'BolC2t10762H' => 'bol', 'BolC2t11191H' => 'bol', 'BolC3t14322H' => 'bol', 'BolC3t19747H' => 'bol', 'BolC3t21425H' => 'bol', 'BolC4t27800H' => 'bol', 'BolC5t31423H' => 'bol', 'BolC6t35951H' => 'bol', 'BolC6t36282H' => 'bol', 'BolC7t40678H' => 'bol', 'BolC7t40679H' => 'bol', 'BolC7t42222H' => 'bol', 'BolC7t43492H' => 'bol', 'BolC7t46785H' => 'bol', 'BolC8t47853H' => 'bol', 'BolC9t56805H' => 'bol', 'BraA02t08000Z' => 'bra', 'BraA02t08341Z' => 'bra', 'BraA03t10936Z' => 'bra', 'BraA03t15657Z' => 'bra', 'BraA04t18100Z' => 'bra', 'BraA05t20523Z' => 'bra', 'BraA06t23353Z' => 'bra', 'BraA06t27473Z' => 'bra', 'BraA06t27769Z' => 'bra', 'BraA07t28928Z' => 'bra', 'BraA08t32236Z' => 'bra', 'BraA08t32841Z' => 'bra', 'BraA08t34524Z' => 'bra', 'BraA09t38742Z' => 'bra', 'BraA09t39295Z' => 'bra', 'C02p47180' => 'bna', 'C02p50990' => 'bna', 'C03p19360' => 'bna', 'C03p74950' => 'bna', 'C03p91000' => 'bna', 'C04p63260' => 'bna', 'C05p27050' => 'bna', 'C06p08750' => 'bna', 'C06p11490' => 'bna', 'C07p02820' => 'bna', 'C07p17180' => 'bna', 'C07p29440' => 'bna', 'C07p63730' => 'bna', 'C09p39260' => 'bna', 'CAN.G1164.34' => 'can', 'CAN.G1164.39' => 'can', 'CAN.G1530.3' => 'can', 'CAN.G162.61' => 'can', 'CAN.G176.6' => 'can', 'CAN.G289.49' => 'can', 'CAN.G370.21' => 'can', 'CAN.G370.22' => 'can', 'CAN.G371.117' => 'can', 'CAN.G58.37' => 'can', 'CAN.G588.98' => 'can', 'CANSAT21G2266' => 'cansat', 'CANSAT25G2799' => 'cansat', 'CANSAT35G0862' => 'cansat', 'CANSAT35G1704' => 'cansat', 'CANSAT35G1760' => 'cansat', 'CANSAT56G3971' => 'cansat', 'CANSAT56G4116' => 'cansat', 'CANSAT80G1259' => 'cansat', 'CARHR027730' => 'chi', 'CARHR033880' => 'chi', 'CARHR043270' => 'chi', 'CARHR145330' => 'chi', 'CARHR145340' => 'chi', 'CARHR175570' => 'chi', 'CARHR181570' => 'chi', 'CARHR258470' => 'chi', 'CARHR260490' => 'chi', 'CARHR294220' => 'chi', 'Carub.0001s2668' => 'cru', 'Carub.0001s3257' => 'cru', 'Carub.0001s4220' => 'cru', 'Carub.0005s0179' => 'cru', 'Carub.0006s2807' => 'cru', 'Carub.0007s0039' => 'cru', 'Carub.0008s0169' => 'cru', 'Carub.0008s0636' => 'cru', 'Ca_00338_v3' => 'car', 'Ca_00542_v3' => 'car', 'Ca_01844_v3' => 'car', 'Ca_10611_v3' => 'car', 'Ca_13326_v3' => 'car', 'Ca_17944_v3' => 'car', 'Ca_18546_v3' => 'car', 'Ca_24219_v3' => 'car', 'Ca_29972_v3' => 'car', 'CBR_g3681' => 'cbr', 'CBR_g40021' => 'cbr', 'Cc01_g08140' => 'ccan', 'Cc02_g13410' => 'ccan', 'Cc02_g37480' => 'ccan', 'Cc05_g12030' => 'ccan', 'Cc09_g03370' => 'ccan', 'Cc09_g10300' => 'ccan', 'Cc10_g03530' => 'ccan', 'Cc10_g11380' => 'ccan', 'CDE01G0176' => 'cde', 'CDE02G0675' => 'cde', 'CDE02G0942' => 'cde', 'CDE02G1153' => 'cde', 'CDE02G4177' => 'cde', 'CDE04G2117' => 'cde', 'CDE04G2736' => 'cde', 'CDE08G1161' => 'cde', 'CDE09G1238' => 'cde', 'Cfa000467' => 'cfa', 'Cfa000947' => 'cfa', 'Cfa004969' => 'cfa', 'Cfa005284' => 'cfa', 'Cfa008993' => 'cfa', 'Cfa018187' => 'cfa', 'Cfa018454' => 'cfa', 'Cfa020585' => 'cfa', 'Ciclev10000424m.g' => 'ccl', 'Ciclev10003605m.g' => 'ccl', 'Ciclev10007828m.g' => 'ccl', 'Ciclev10014620m.g' => 'ccl', 'Ciclev10015169m.g' => 'ccl', 'Ciclev10018291m.g' => 'ccl', 'Ciclev10028256m.g' => 'ccl', 'Ciclev10033822m.g' => 'ccl', 'CiPaw.05G060300' => 'cil', 'CiPaw.05G085000' => 'cil', 'CiPaw.06G083700' => 'cil', 'CiPaw.06G120300' => 'cil', 'CiPaw.09G060500' => 'cil', 'CiPaw.09G123800' => 'cil', 'CiPaw.11G169700' => 'cil', 'CiPaw.12G118300' => 'cil', 'CiPaw.15G071000' => 'cil', 'CiPaw.15G081900' => 'cil', 'ClCG01G024610' => 'cla', 'ClCG03G006070' => 'cla', 'ClCG05G019250' => 'cla', 'ClCG09G009500' => 'cla', 'ClCG11G008200' => 'cla', 'ClCG11G018080' => 'cla', 'COL.COLO4_17373' => 'col', 'COL.COLO4_22994' => 'col', 'COL.COLO4_26389' => 'col', 'COL.COLO4_27170' => 'col', 'COL.COLO4_31074' => 'col', 'COL.COLO4_31465' => 'col', 'COL.COLO4_36438' => 'col', 'COL.COLO4_36439' => 'col', 'Cpa.g.c38781' => 'cpa', 'Cpa.g.sc128.12' => 'cpa', 'Cpa.g.sc166.7' => 'cpa', 'Cpa.g.sc166.8' => 'cpa', 'Cpa.g.sc20.111' => 'cpa', 'Cpa.g.sc27.31' => 'cpa', 'Cpa.g.sc64.36' => 'cpa', 'Cpa.g.sc64.37' => 'cpa', 'Cpa.g.sc66.49' => 'cpa', 'Cpa.g.sc80.64' => 'cpa', 'CsaV3_1G012320' => 'csa', 'CsaV3_2G008480' => 'csa', 'CsaV3_2G033450' => 'csa', 'CsaV3_3G044830' => 'csa', 'CsaV3_4G033710' => 'csa', 'CsaV3_6G051730' => 'csa', 'CsaV3_7G025350' => 'csa', 'CSS0001067' => 'camsi', 'CSS0005996' => 'camsi', 'CSS0006590' => 'camsi', 'CSS0009673' => 'camsi', 'CSS0010201' => 'camsi', 'CSS0010549' => 'camsi', 'CSS0011364' => 'camsi', 'CSS0014473' => 'camsi', 'CSS0014961' => 'camsi', 'CSS0020191' => 'camsi', 'CSS0021165' => 'camsi', 'CSS0022306' => 'camsi', 'CSS0030591' => 'camsi', 'CSS0030696' => 'camsi', 'CSS0032653' => 'camsi', 'CSS0037487' => 'camsi', 'CSS0041102' => 'camsi', 'CSS0041261' => 'camsi', 'CSS0046246' => 'camsi', 'CSS0049256' => 'camsi', 'DCAR_004075' => 'dca', 'DCAR_011538' => 'dca', 'DCAR_019553' => 'dca', 'DCAR_020952' => 'dca', 'DCAR_021739' => 'dca', 'DCAR_027407' => 'dca', 'DCAR_027913' => 'dca', 'DCAR_028066' => 'dca', 'Dinv05899' => 'din', 'Dinv07563' => 'din', 'Dinv08010' => 'din', 'Dinv14125' => 'din', 'Dinv20172' => 'din', 'Dinv30743' => 'din', 'Dinv31229' => 'din', 'Dinv34162' => 'din', 'Dinv36028' => 'din', 'Dinv39368' => 'din', 'Dinv40565' => 'din', 'Dinv41706' => 'din', 'Duzib052G0089' => 'dzi', 'Duzib116G0641' => 'dzi', 'Duzib132G0069' => 'dzi', 'Duzib132G1219' => 'dzi', 'Duzib147G0278' => 'dzi', 'Duzib160G0480' => 'dzi', 'Duzib170G0661' => 'dzi', 'Duzib177G0591' => 'dzi', 'Duzib187G1353' => 'dzi', 'Duzib192G0858' => 'dzi', 'Duzib192G0883' => 'dzi', 'Duzib213G0506' => 'dzi', 'Duzib235G0289' => 'dzi', 'Duzib251G0422' => 'dzi', 'ECA232G3898' => 'eca', 'ECA233G5950' => 'eca', 'ECA234G1699' => 'eca', 'ECA234G2421' => 'eca', 'ECA236G0426' => 'eca', 'ECA236G4331' => 'eca', 'ECA248G2573' => 'eca', 'EL10Ac1g00077' => 'bvu', 'EL10Ac1g01746' => 'bvu', 'EL10Ac2g03464' => 'bvu', 'EL10Ac4g08176' => 'bvu', 'EL10Ac7g17521' => 'bvu', 'EL10Ac8g20386' => 'bvu', 'EL10Ac9g21343' => 'bvu', 'EL10Ac9g22688' => 'bvu', 'Eucgr.B03434' => 'egr', 'Eucgr.D00618' => 'egr', 'Eucgr.E02395' => 'egr', 'Eucgr.F01129' => 'egr', 'Eucgr.F02622' => 'egr', 'Eucgr.F04207' => 'egr', 'FAN01G0570' => 'fan', 'FAN03G3351' => 'fan', 'FAN06G3702' => 'fan', 'FAN07G2149' => 'fan', 'FAN10G3758' => 'fan', 'FAN11G1170' => 'fan', 'FAN11G2050' => 'fan', 'FAN11G2724' => 'fan', 'FAN12G1700' => 'fan', 'FAN12G2028' => 'fan', 'FAN15G1160' => 'fan', 'FAN15G3063' => 'fan', 'FAN16G2540' => 'fan', 'FAN16G3077' => 'fan', 'FAN16G3624' => 'fan', 'FAN17G0221' => 'fan', 'FAN20G2492' => 'fan', 'FAN20G2905' => 'fan', 'FAN21G0548' => 'fan', 'FAN21G1300' => 'fan', 'FAN22G0077' => 'fan', 'FAN22G1315' => 'fan', 'FAN24G1280' => 'fan', 'FAN24G1445' => 'fan', 'FAN24G3527' => 'fan', 'FAN25G0464' => 'fan', 'FAN25G2885' => 'fan', 'FAN25G3270' => 'fan', 'FAN27G1101' => 'fan', 'FAN27G2846' => 'fan', 'FAN27G3524' => 'fan', 'FvH4_2g11770' => 'fve', 'FvH4_2g15630' => 'fve', 'FvH4_3g05570' => 'fve', 'FvH4_3g09110' => 'fve', 'FvH4_3g19940' => 'fve', 'FvH4_4g04821' => 'fve', 'FvH4_4g31480' => 'fve', 'FvH4_7g01740' => 'fve', 'Glyma.05G130400' => 'gma', 'Glyma.05G156400' => 'gma', 'Glyma.07G197000' => 'gma', 'Glyma.08G085151' => 'gma', 'Glyma.08G114500' => 'gma', 'Glyma.08G300400' => 'gma', 'Glyma.10G215800' => 'gma', 'Glyma.12G224400' => 'gma', 'Glyma.13G179300' => 'gma', 'Glyma.13G218151' => 'gma', 'Glyma.13G238800' => 'gma', 'Glyma.13G276900' => 'gma', 'Glyma.14G078200' => 'gma', 'Glyma.15G074500' => 'gma', 'Glyma.15G094100' => 'gma', 'Glyma.17G247200' => 'gma', 'Glyma.18G120100' => 'gma', 'Glyma.20G176000' => 'gma', 'Gohir.A01G063600' => 'ghi', 'Gohir.A01G170301' => 'ghi', 'Gohir.A02G060500' => 'ghi', 'Gohir.A05G133850' => 'ghi', 'Gohir.A05G161400' => 'ghi', 'Gohir.A06G012900' => 'ghi', 'Gohir.A06G035901' => 'ghi', 'Gohir.A06G127100' => 'ghi', 'Gohir.A06G210500' => 'ghi', 'Gohir.A08G008650' => 'ghi', 'Gohir.A09G072700' => 'ghi', 'Gohir.A09G088301' => 'ghi', 'Gohir.A10G040600' => 'ghi', 'Gohir.A12G036300' => 'ghi', 'Gohir.A12G143350' => 'ghi', 'Gohir.A12G165500' => 'ghi', 'Gohir.A13G145700' => 'ghi', 'Gohir.D01G050000' => 'ghi', 'Gohir.D01G051366' => 'ghi', 'Gohir.D01G161350' => 'ghi', 'Gohir.D02G065900' => 'ghi', 'Gohir.D05G164200' => 'ghi', 'Gohir.D05G355500' => 'ghi', 'Gohir.D06G010400' => 'ghi', 'Gohir.D06G111250' => 'ghi', 'Gohir.D06G132000' => 'ghi', 'Gohir.D06G210500' => 'ghi', 'Gohir.D07G165675' => 'ghi', 'Gohir.D08G062240' => 'ghi', 'Gohir.D08G086101' => 'ghi', 'Gohir.D08G138060' => 'ghi', 'Gohir.D09G072300' => 'ghi', 'Gohir.D10G041400' => 'ghi', 'Gohir.D11G191020' => 'ghi', 'Gohir.D11G212066' => 'ghi', 'Gohir.D12G036300' => 'ghi', 'Gohir.D12G168600' => 'ghi', 'Gohir.D13G150600' => 'ghi', 'Gorai.001G057300' => 'gra', 'Gorai.002G069900' => 'gra', 'Gorai.002G200000' => 'gra', 'Gorai.003G067600' => 'gra', 'Gorai.005G074800' => 'gra', 'Gorai.006G087300' => 'gra', 'Gorai.008G037500' => 'gra', 'Gorai.008G181400' => 'gra', 'Gorai.009G169400' => 'gra', 'Gorai.009G387900' => 'gra', 'Gorai.010G013300' => 'gra', 'Gorai.010G153800' => 'gra', 'Gorai.010G255800' => 'gra', 'Gorai.011G043700' => 'gra', 'Gorai.011G198900' => 'gra', 'Gorai.013G168400' => 'gra', 'GSVIVG01005212001' => 'vvi', 'GSVIVG01006163001' => 'vvi', 'GSVIVG01009625001' => 'vvi', 'GSVIVG01014338001' => 'vvi', 'GSVIVG01020005001' => 'vvi', 'GSVIVG01021450001' => 'vvi', 'GSVIVG01023975001' => 'vvi', 'GSVIVG01034490001' => 'vvi', 'HanXRQChr04g0112071' => 'han', 'HanXRQChr05g0131151' => 'han', 'HanXRQChr09g0262371' => 'han', 'HanXRQChr09g0268401' => 'han', 'HanXRQChr10g0279241' => 'han', 'HanXRQChr10g0297961' => 'han', 'HanXRQChr11g0326231' => 'han', 'HanXRQChr11g0328471' => 'han', 'HanXRQChr16g0507941' => 'han', 'HanXRQChr17g0560211' => 'han', 'Haze_02108' => 'cav', 'Haze_02428' => 'cav', 'Haze_05593' => 'cav', 'Haze_06448' => 'cav', 'Haze_09427' => 'cav', 'Haze_12022' => 'cav', 'Haze_17612' => 'cav', 'Haze_17928' => 'cav', 'Hma1.2p1_0032F.1_g019250' => 'hma', 'Hma1.2p1_0163F.1_g072690' => 'hma', 'Hma1.2p1_0265F.1_g106710' => 'hma', 'Hma1.2p1_0286F.1_g113970' => 'hma', 'Hma1.2p1_0363F.1_g136640' => 'hma', 'Hma1.2p1_0584F.1_g183470' => 'hma', 'Hma1.2p1_0885F.1_g232570' => 'hma', 'HPP92_006022' => 'vpl', 'HPP92_007320' => 'vpl', 'HPP92_011521' => 'vpl', 'HPP92_019387' => 'vpl', 'HPP92_024038' => 'vpl', 'Hund05891' => 'sun', 'Hund06450' => 'sun', 'Hund12053' => 'sun', 'Hund16800' => 'sun', 'Hund21222' => 'sun', 'Hund22896' => 'sun', 'Hund23746' => 'sun', 'Hund27083' => 'sun', 'Lalb_Chr02g0141831' => 'lal', 'Lalb_Chr02g0141841' => 'lal', 'Lalb_Chr05g0220411' => 'lal', 'Lalb_Chr06g0162081' => 'lal', 'Lalb_Chr09g0327651' => 'lal', 'Lalb_Chr13g0295051' => 'lal', 'Lalb_Chr15g0086801' => 'lal', 'Lalb_Chr16g0383781' => 'lal', 'Lalb_Chr16g0383791' => 'lal', 'Lalb_Chr18g0055441' => 'lal', 'Lalb_Chr18g0059611' => 'lal', 'Lalb_Chr20g0109661' => 'lal', 'Lalb_Chr20g0109831' => 'lal', 'Lalb_Chr20g0121871' => 'lal', 'Lalb_Chr22g0355361' => 'lal', 'Lalb_Chr25g0286371' => 'lal', 'Lj1A1187G43' => 'lonja', 'Lj1A1205T50' => 'lonja', 'Lj1A800G33' => 'lonja', 'Lj1C1187T7' => 'lonja', 'Lj1C843T11' => 'lonja', 'Lj1g0010940' => 'lja', 'Lj2A288T69' => 'lonja', 'Lj3g0024276' => 'lja', 'Lj4A47T76' => 'lonja', 'Lj4g0005805' => 'lja', 'Lj4g0006097' => 'lja', 'Lj4g0008528' => 'lja', 'Lj4g0024907' => 'lja', 'Lj5g0012472' => 'lja', 'Lj5g0018648' => 'lja', 'Lj6C789G1' => 'lonja', 'Lj6g0004000' => 'lja', 'Lj7A292G67' => 'lonja', 'Lj7A292T64' => 'lonja', 'Lj9A400T58' => 'lonja', 'Lsat_1_v5_gn_1_126181' => 'lsa', 'Lsat_1_v5_gn_4_123041' => 'lsa', 'Lsat_1_v5_gn_4_133620' => 'lsa', 'Lsat_1_v5_gn_4_53221' => 'lsa', 'Lsat_1_v5_gn_4_71961' => 'lsa', 'Lsat_1_v5_gn_7_105241' => 'lsa', 'Lsat_1_v5_gn_7_21361' => 'lsa', 'Lsat_1_v5_gn_7_28860' => 'lsa', 'Lsat_1_v5_gn_7_31260' => 'lsa', 'Lsat_1_v5_gn_8_52801' => 'lsa', 'Manes.02G191400' => 'mes', 'Manes.03G110100' => 'mes', 'Manes.04G071100' => 'mes', 'Manes.05G100500' => 'mes', 'Manes.05G164700' => 'mes', 'Manes.15G087000' => 'mes', 'Manes.15G121500' => 'mes', 'Manes.16G028300' => 'mes', 'Manes.17G046100' => 'mes', 'Manes.17G069800' => 'mes', 'Manes.18G100500' => 'mes', 'Mapoly0002s0109' => 'mpo', 'Mapoly0024s0007' => 'mpo', 'Mapoly0089s0032' => 'mpo', 'MBI04_g42241_MAGBIO' => 'mbi', 'MBI05_g11988_MAGBIO' => 'mbi', 'MBI05_g35452_MAGBIO' => 'mbi', 'MBI07_g30179_MAGBIO' => 'mbi', 'MBI07_g35859_MAGBIO' => 'mbi', 'MBI07_g35860_MAGBIO' => 'mbi', 'MBI07_g37166_MAGBIO' => 'mbi', 'MBI08_g18172_MAGBIO' => 'mbi', 'MBI09_g08441_MAGBIO' => 'mbi', 'MBI13_g01676_MAGBIO' => 'mbi', 'MBI14_g42955_MAGBIO' => 'mbi', 'MBI16_g13161_MAGBIO' => 'mbi', 'MBI17_g27204_MAGBIO' => 'mbi', 'MBI19_g21595_MAGBIO' => 'mbi', 'MD00G1148400' => 'mdo', 'MD02G1301200' => 'mdo', 'MD03G1227800' => 'mdo', 'MD05G1041100' => 'mdo', 'MD05G1124800' => 'mdo', 'MD05G1284000' => 'mdo', 'MD05G1338800' => 'mdo', 'MD05G1338900' => 'mdo', 'MD07G1022800' => 'mdo', 'MD10G1047500' => 'mdo', 'MD10G1127500' => 'mdo', 'MD10G1262300' => 'mdo', 'MD10G1293800' => 'mdo', 'MD16G1074300' => 'mdo', 'Medtr1g021670' => 'mtr', 'Medtr1g096320' => 'mtr', 'Medtr2g013690' => 'mtr', 'Medtr2g019450' => 'mtr', 'Medtr2g085170' => 'mtr', 'Medtr4g088785' => 'mtr', 'Medtr8g055930' => 'mtr', 'Medtr8g085850' => 'mtr', 'MELO3C002605.2' => 'cme', 'MELO3C003891.2' => 'cme', 'MELO3C004012.2' => 'cme', 'MELO3C007134.2' => 'cme', 'MELO3C008118.2' => 'cme', 'MELO3C016700.2' => 'cme', 'MELO3C024127.2' => 'cme', 'MELO3C033361.2' => 'cme', 'MELO3C033362.2' => 'cme', 'Migut.C00430' => 'egut', 'Migut.C01246' => 'egut', 'Migut.E00101' => 'egut', 'Migut.H01486' => 'egut', 'Migut.H01939' => 'egut', 'Migut.K00360' => 'egut', 'Migut.M00910' => 'egut', 'Migut.M01139' => 'egut', 'Migut.N02677' => 'egut', 'MSTRG.13252' => 'ama', 'MSTRG.14701' => 'ama', 'MSTRG.1521' => 'ama', 'MSTRG.15884' => 'ama', 'MSTRG.16242' => 'ama', 'MSTRG.22285' => 'ama', 'MSTRG.22444' => 'ama', 'MSTRG.2349' => 'ama', 'MSTRG.26308' => 'ama', 'MSTRG.28296' => 'ama', 'MSTRG.9895' => 'ama', 'Nitab4.5_0000110g0060' => 'nta', 'Nitab4.5_0000420g0130' => 'nta', 'Nitab4.5_0000422g0030' => 'nta', 'Nitab4.5_0000560g0180' => 'nta', 'Nitab4.5_0000703g0100' => 'nta', 'Nitab4.5_0000786g0200' => 'nta', 'Nitab4.5_0001336g0020' => 'nta', 'Nitab4.5_0001796g0030' => 'nta', 'Nitab4.5_0003348g0060' => 'nta', 'Nitab4.5_0003698g0040' => 'nta', 'Nitab4.5_0003942g0090' => 'nta', 'Nitab4.5_0004775g0070' => 'nta', 'Nitab4.5_0004864g0030' => 'nta', 'Nitab4.5_0005615g0020' => 'nta', 'Nitab4.5_0009288g0030' => 'nta', 'Nitab4.5_0009341g0010' => 'nta', 'Nitab4.5_0009535g0010' => 'nta', 'Nn1g03995' => 'nnu', 'Nn1g04100' => 'nnu', 'Nn1g06530' => 'nnu', 'Nn3g16404' => 'nnu', 'Nn3g17212' => 'nnu', 'Nn3g20776' => 'nnu', 'Nn3g21923' => 'nnu', 'Nn5g27737' => 'nnu', 'Nn5g29461' => 'nnu', 'Nn7g38355' => 'nnu', 'Nn8g39873' => 'nnu', 'Oeu000548.2' => 'oeu', 'Oeu004672.1' => 'oeu', 'Oeu015605.2' => 'oeu', 'Oeu016092.1' => 'oeu', 'Oeu017879.3' => 'oeu', 'Oeu024910.1' => 'oeu', 'Oeu028965.1' => 'oeu', 'Oeu031269.1' => 'oeu', 'Oeu031270.1' => 'oeu', 'Oeu032535.1' => 'oeu', 'Oeu034151.1' => 'oeu', 'Oeu034152.1' => 'oeu', 'Oeu034588.2' => 'oeu', 'Oeu050846.1' => 'oeu', 'Oeu050849.2' => 'oeu', 'Oeu051063.2' => 'oeu', 'Oeu052368.1' => 'oeu', 'Oeu052370.1' => 'oeu', 'Os01g0210400' => 'osa', 'Os01g0304300' => 'osa', 'Os01g0749100' => 'osa', 'Os02g0745800' => 'osa', 'Os03g0769050' => 'osa', 'Os05g0531500' => 'osa', 'Os06g0724300' => 'osa', 'Os11g0198100' => 'osa', 'Peaxi162Scf00069g01425' => 'pax', 'Peaxi162Scf00280g00811' => 'pax', 'Peaxi162Scf00310g00615' => 'pax', 'Peaxi162Scf00362g00542' => 'pax', 'Peaxi162Scf00461g00310' => 'pax', 'Peaxi162Scf00530g00118' => 'pax', 'Peaxi162Scf00541g00057' => 'pax', 'Peaxi162Scf00661g00017' => 'pax', 'Peaxi162Scf00926g00027' => 'pax', 'Peaxi162Scf01064g00263' => 'pax', 'Peaxi162Scf01211g00135' => 'pax', 'PGR004G2336' => 'pgr', 'PGR042G0327' => 'pgr', 'PGR042G1957' => 'pgr', 'PGR042G2003' => 'pgr', 'PGR042G3929' => 'pgr', 'PGR083G1137' => 'pgr', 'PGR083G1364' => 'pgr', 'PGSC0003DMG400003381' => 'stu', 'PGSC0003DMG400003417' => 'stu', 'PGSC0003DMG400008981' => 'stu', 'PGSC0003DMG400012417' => 'stu', 'PGSC0003DMG400012823' => 'stu', 'PGSC0003DMG400016885' => 'stu', 'PGSC0003DMG400022812' => 'stu', 'PGSC0003DMG400029726' => 'stu', 'PGSC0003DMG401009243' => 'stu', 'PGSC0003DMG401031505' => 'stu', 'PGSC0003DMG402031505' => 'stu', 'Phvul.001G017600' => 'pvu', 'Phvul.002G193500' => 'pvu', 'Phvul.002G228900' => 'pvu', 'Phvul.002G236800' => 'pvu', 'Phvul.003G049500' => 'pvu', 'Phvul.005G072000' => 'pvu', 'Phvul.006G164800' => 'pvu', 'Phvul.006G185100' => 'pvu', 'Phvul.007G090000' => 'pvu', 'Potri.001G399800' => 'ptr', 'Potri.002G149900' => 'ptr', 'Potri.004G044100' => 'ptr', 'Potri.004G177600' => 'ptr', 'Potri.009G138000' => 'ptr', 'Potri.010G094000' => 'ptr', 'Potri.011G053000' => 'ptr', 'Potri.011G119300' => 'ptr', 'Potri.013G113700' => 'ptr', 'Potri.018G107800' => 'ptr', 'Potri.019G084100' => 'ptr', 'Pp3c14_23720' => 'ppa', 'Pp3c16_6340' => 'ppa', 'Pp3c23_13420' => 'ppa', 'Pp3c24_2740' => 'ppa', 'Pp3c25_860' => 'ppa', 'Pp3c8_21750' => 'ppa', 'Prupe.1G273000' => 'ppe', 'Prupe.1G273700' => 'ppe', 'Prupe.1G274100' => 'ppe', 'Prupe.2G023300' => 'ppe', 'Prupe.4G048000' => 'ppe', 'Prupe.4G080400' => 'ppe', 'Prupe.4G181200' => 'ppe', 'Prupe.8G056900' => 'ppe', 'Prupe.8G168700' => 'ppe', 'Psat1g189080' => 'psa', 'Psat1g204760' => 'psa', 'Psat4g175560' => 'psa', 'Psat4g177720' => 'psa', 'Psat5g244240' => 'psa', 'Psat6g010720' => 'psa', 'Psat6g187200' => 'psa', 'Psat7g072040' => 'psa', 'PSO017G3501' => 'pso', 'PSO063G2148' => 'pso', 'PSO063G5608' => 'pso', 'PSO210G6392' => 'pso', 'PSO541G2319' => 'pso', 'PSO541G2836' => 'pso', 'PSO541G4012' => 'pso', 'PSO541G6253' => 'pso', 'PSO675G0580' => 'pso', 'PSO675G0856' => 'pso', 'PSO675G5635' => 'pso', 'PSO675G9157' => 'pso', 'PSO832G1660' => 'pso', 'PSO832G1969' => 'pso', 'QL02p007186' => 'qlo', 'QL02p033904' => 'qlo', 'QL03p064391' => 'qlo', 'QL05p040593' => 'qlo', 'QL05p058242' => 'qlo', 'QL08p021825' => 'qlo', 'QL11p004981' => 'qlo', 'RcHm_v2.0_Chr1g0318301' => 'rch', 'RcHm_v2.0_Chr4g0418501' => 'rch', 'RcHm_v2.0_Chr4g0439971' => 'rch', 'RcHm_v2.0_Chr5g0008541' => 'rch', 'RcHm_v2.0_Chr5g0014101' => 'rch', 'RcHm_v2.0_Chr5g0014131' => 'rch', 'RcHm_v2.0_Chr5g0033621' => 'rch', 'RcHm_v2.0_Chr6g0272041' => 'rch', 'RcHm_v2.0_Chr6g0278831' => 'rch', 'Rhsim02G0130400' => 'rsi', 'Rhsim02G0171100' => 'rsi', 'Rhsim05G0053000' => 'rsi', 'Rhsim05G0053100' => 'rsi', 'Rhsim06G0096500' => 'rsi', 'Rhsim06G0096600' => 'rsi', 'Rhsim06G0199100' => 'rsi', 'Rhsim12G0062300' => 'rsi', 'Rhsim12G0062800' => 'rsi', 'Sabra02G0118600' => 'sbr', 'Sabra04G0027300' => 'sbr', 'Sabra04G0119500' => 'sbr', 'Sabra08G0112500' => 'sbr', 'Sabra11G0036800' => 'sbr', 'Sabra11G0103800' => 'sbr', 'Sabra13G0096300' => 'sbr', 'Sabra16G0262300' => 'sbr', 'Sabra18G0091700' => 'sbr', 'Sabra19G0095400' => 'sbr', 'SalBow6G3080' => 'sbo', 'SalBow7G1157' => 'sbo', 'SalBow7G2123' => 'sbo', 'SalBow7G2285' => 'sbo', 'SalBow7G3537' => 'sbo', 'SalBow8G2947' => 'sbo', 'SalBow8G4463' => 'sbo', 'SalBow8G5466' => 'sbo', 'Sc01g0001750' => 'sci', 'Sc02g0006640' => 'sci', 'Sc02g0006670' => 'sci', 'Sc04g0008220' => 'sci', 'Sc05g0006190' => 'sci', 'Sc08g0002760' => 'sci', 'Sc17g0006170' => 'sci', 'Sc22g0002050' => 'sci', 'Sc23g0001190' => 'sci', 'Sc24g0000980' => 'sci', 'Sed0006245' => 'sed', 'Sed0007543' => 'sed', 'Sed0009411' => 'sed', 'Sed0010765' => 'sed', 'Sed0012944' => 'sed', 'Sed0014682' => 'sed', 'Sed0016174' => 'sed', 'Sed0016796' => 'sed', 'Sed0020317' => 'sed', 'Sed0021467' => 'sed', 'SEGI_01316' => 'sgi', 'SEGI_03374' => 'sgi', 'SEGI_16265' => 'sgi', 'SEGI_18569' => 'sgi', 'SEGI_20351' => 'sgi', 'SEGI_26395' => 'sgi', 'SEGI_29469' => 'sgi', 'SEGI_34771' => 'sgi', 'SEGI_36769' => 'sgi', 'SEGI_37139' => 'sgi', 'SGA_v2.0_scaffold100G29687' => 'sas', 'SGA_v2.0_scaffold118G32472' => 'sas', 'SGA_v2.0_scaffold14G07051' => 'sas', 'SGA_v2.0_scaffold183G39845' => 'sas', 'SGA_v2.0_scaffold1G00174' => 'sas', 'SGA_v2.0_scaffold22G09714' => 'sas', 'SGA_v2.0_scaffold333G48992' => 'sas', 'SGA_v2.0_scaffold46G17491' => 'sas', 'SGA_v2.0_scaffold49G18294' => 'sas', 'SGA_v2.0_scaffold63G21658' => 'sas', 'SHI01741' => 'shi', 'SHI05771' => 'shi', 'SHI18077' => 'shi', 'SHI20525' => 'shi', 'SHI20527' => 'shi', 'SHI20528' => 'shi', 'SMO172G0185' => 'smo', 'SMO198G0020' => 'smo', 'SMO351G0006' => 'smo', 'SMO356G0118' => 'smo', 'SMO358G0296' => 'smo', 'SMO367G0079' => 'smo', 'SMO367G1277' => 'smo', 'Solyc01g014220.3' => 'sly', 'Solyc01g111770.2' => 'sly', 'Solyc02g078180.3' => 'sly', 'Solyc03g006430.3' => 'sly', 'Solyc03g006456.1' => 'sly', 'Solyc03g079860.2' => 'sly', 'Solyc04g079770.3' => 'sly', 'Solyc05g007430.4' => 'sly', 'Solyc07g063150.3' => 'sly', 'Solyc08g016620.3' => 'sly', 'Solyc09g057590.3' => 'sly', 'Solyc09g057600.1' => 'sly', 'Solyc10g009050.3' => 'sly', 'Solyc11g017420.2' => 'sly', 'Sopen01g053810' => 'spe', 'Sopen02g023040' => 'spe', 'Sopen03g002440' => 'spe', 'Sopen04g033350' => 'spe', 'Sopen05g003310' => 'spe', 'Sopen07g004050' => 'spe', 'Sopen07g031340' => 'spe', 'Sopen08g006990' => 'spe', 'Sopen10g004830' => 'spe', 'Sopen11g009370' => 'spe', 'Sp1g24450' => 'spa', 'Sp1g29670' => 'spa', 'Sp1g39600' => 'spa', 'Sp2g11080' => 'spa', 'Sp2g13970' => 'spa', 'Sp4g16130' => 'spa', 'Sp6g13080' => 'spa', 'Sp7g37270' => 'spa', 'TAR371G0065' => 'tar', 'TAR376G0340' => 'tar', 'TAR376G0435' => 'tar', 'TAR381G0002' => 'tar', 'TAR381G1236' => 'tar', 'TAR624G0055' => 'tar', 'TAR624G0324' => 'tar', 'TAR624G0696' => 'tar', 'TAR624G0906' => 'tar', 'TAR625G0107' => 'tar', 'TAR626G0015' => 'tar', 'TAR626G1356' => 'tar', 'TAR627G0888' => 'tar', 'TAR628G0399' => 'tar', 'TAR628G1327' => 'tar', 'TAR629G2831' => 'tar', 'TAR629G2874' => 'tar', 'TAR633G1432' => 'tar', 'TAR633G2771' => 'tar', 'THA.LOC104803394' => 'tha', 'THA.LOC104805153' => 'tha', 'THA.LOC104806784' => 'tha', 'THA.LOC104810473' => 'tha', 'THA.LOC104813100' => 'tha', 'THA.LOC104814215' => 'tha', 'THA.LOC104815554' => 'tha', 'THA.LOC104820544' => 'tha', 'THA.LOC104824754' => 'tha', 'THA.LOC104827717' => 'tha', 'Thecc.02G031400' => 'tca', 'Thecc.02G055900' => 'tca', 'Thecc.02G350800' => 'tca', 'Thecc.06G150900' => 'tca', 'Thecc.06G186600' => 'tca', 'Thecc.07G089600' => 'tca', 'Thecc.08G020400' => 'tca', 'Thecc.08G182100' => 'tca', 'Thhalv10000873m.g' => 'esa', 'Thhalv10004185m.g' => 'esa', 'Thhalv10006981m.g' => 'esa', 'Thhalv10007204m.g' => 'esa', 'Thhalv10011374m.g' => 'esa', 'Thhalv10013482m.g' => 'esa', 'Thhalv10017801m.g' => 'esa', 'Thhalv10024983m.g' => 'esa', 'TPR.G12072' => 'tpr', 'TPR.G15769' => 'tpr', 'TPR.G16504' => 'tpr', 'TPR.G16506' => 'tpr', 'TPR.G24345' => 'tpr', 'TPR.G26666' => 'tpr', 'TPR.G27320' => 'tpr', 'TPR.G31819' => 'tpr', 'TPR.G38879' => 'tpr', 'TPR.G39015' => 'tpr', 'TPR.G8819' => 'tpr', 'TWI09G0924' => 'twi', 'TWI12G0811' => 'twi', 'TWI12G1294' => 'twi', 'TWI31G0150' => 'twi', 'TWI36G1262' => 'twi', 'TWI38G1287' => 'twi', 'TWI38G1633' => 'twi', 'TWI38G1982' => 'twi', 'TWI39G0116' => 'twi', 'TWI60G1011' => 'twi', 'TWI63G0171' => 'twi', 'TWI73G0839' => 'twi', 'TWI79G1511' => 'twi', 'unitig_0.g915' => 'ugi', 'unitig_0.g916' => 'ugi', 'unitig_21.g20219' => 'ugi', 'unitig_21.g20416' => 'ugi', 'unitig_578.g16132' => 'ugi', 'unitig_578.g16718' => 'ugi', 'unitig_62.g23481' => 'ugi', 'unitig_744.g24535' => 'ugi', 'unitig_749.g13525' => 'ugi', 'vmacro01248' => 'vma', 'vmacro02290' => 'vma', 'vmacro10946' => 'vma', 'vmacro11865' => 'vma', 'vmacro12493' => 'vma', 'vmacro17322' => 'vma', 'vmacro21599' => 'vma', 'vmacro23041' => 'vma', 'VMungo0251G0004' => 'vmu', 'VMungo0251G2639' => 'vmu', 'VMungo0251G2967' => 'vmu', 'VMungo0540G0864' => 'vmu', 'VMungo0540G1569' => 'vmu', 'VMungo0647G0317' => 'vmu', 'VMungo0720G1373' => 'vmu', 'VMungo0720G1508' => 'vmu', 'VMungo1080G0485' => 'vmu', 'VMungo1215G3177' => 'vmu', 'Zm00001eb112600' => 'zma', 'Zm00001eb120220' => 'zma', 'Zm00001eb153240' => 'zma', 'Zm00001eb168880' => 'zma', 'Zm00001eb213920' => 'zma', 'Zm00001eb228280' => 'zma', 'Zm00001eb254580' => 'zma', 'Zm00001eb272180' => 'zma', 'Zm00001eb293190' => 'zma', 'Zm00001eb322930' => 'zma', 'Zm00001eb353360' => 'zma', 'Zm00001eb353390' => 'zma', 'Zm00001eb353430' => 'zma', 'Zm00001eb353440' => 'zma', 'Zm00001eb353780' => 'zma' ) $gf_id = 'HOM05D000499' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000499' ) $data_identifier = 'HOM05D000499' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 29, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 12, 'amhyb' => (int) 8, 'aly' => (int) 12, 'aox' => (int) 9, 'arhy' => (int) 26, 'ath' => (int) 8, 'atr' => (int) 7, 'acertr' => (int) 10, 'cqu' => (int) 15, 'bca' => (int) 29, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 11, 'cansat' => (int) 8, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 9, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 8, 'cpa' => (int) 10, 'csa' => (int) 7, 'camsi' => (int) 20, 'dca' => (int) 8, 'din' => (int) 12, 'dzi' => (int) 14, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 6, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 38, 'gra' => (int) 16, 'vvi' => (int) 8, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 5, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 11, 'lja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 11, 'mpo' => (int) 3, 'mbi' => (int) 14, 'mdo' => (int) 14, 'mtr' => (int) 8, 'cme' => (int) 9, 'egut' => (int) 9, 'ama' => (int) 11, 'nta' => (int) 17, 'nnu' => (int) 11, 'oeu' => (int) 18, 'osa' => (int) 8, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 6, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 9, 'rsi' => (int) 9, 'sbr' => (int) 10, 'sbo' => (int) 8, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 10, 'sas' => (int) 10, 'shi' => (int) 6, 'smo' => (int) 7, 'sly' => (int) 14, 'spe' => (int) 10, 'spa' => (int) 8, 'tar' => (int) 19, 'tha' => (int) 10, 'tca' => (int) 8, 'esa' => (int) 8, 'tpr' => (int) 11, 'twi' => (int) 13, 'ugi' => (int) 9, 'vma' => (int) 8, 'vmu' => (int) 10, 'zma' => (int) 15 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb353780' $species_info = array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ) $local_species = 'shi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000499', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1066', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p29780' => 'bna', 'A02p33180' => 'bna', 'A03p16470' => 'bna', 'A03p66010' => 'bna', 'A04p25970' => 'bna', 'A06p01270' => 'bna', 'A06p46080' => 'bna', 'A07p11400' => 'bna', 'A08p01840' => 'bna', 'A08p08230' => 'bna', 'A08p25740' => 'bna', 'A09p32070' => 'bna', 'A09p37830' => 'bna', 'A09p42840' => 'bna', 'A09p42850' => 'bna', 'Aa31LG10G2060' => 'aar', 'Aa31LG2G7410' => 'aar', 'Aa31LG6G10200' => 'aar', 'Aa31LG6G16680' => 'aar', 'Aa31LG6G8470' => 'aar', 'Aa31LG9G12730' => 'aar', 'Aa31LG9G13680' => 'aar', 'Aa31LG9G14920' => 'aar', 'Aa31LG9G6650' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4977' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5467' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3254' => 'aag', 'Actinidia02578' => 'ach', 'Actinidia07693' => 'ach', 'Actinidia08413' => 'ach', 'Actinidia08414' => 'ach', 'Actinidia15289' => 'ach', 'Actinidia19871' => 'ach', 'Actinidia21475' => 'ach', 'Actinidia22576' => 'ach', 'Actinidia28327' => 'ach', 'Actinidia32491' => 'ach', 'Actinidia39463' => 'ach', 'Actinidia39571' => 'ach', 'Ah.01g013750' => 'amhyb', 'Ah.01g023210' => 'amhyb', 'Ah.04g164850' => 'amhyb', 'Ah.05g178060' => 'amhyb', 'Ah.07g204270' => 'amhyb', 'Ah.07g208480' => 'amhyb', 'Ah.09g237410' => 'amhyb', 'Ah.14g089460' => 'amhyb', 'AL1G41790' => 'aly', 'AL1G49050' => 'aly', 'AL1G53810' => 'aly', 'AL1G61400' => 'aly', 'AL4G18580' => 'aly', 'AL5G12510' => 'aly', 'AL5G12540' => 'aly', 'AL6G43230' => 'aly', 'AL7G10370' => 'aly', 'AL7G19250' => 'aly', 'AL8G12240' => 'aly', 'AL8G18540' => 'aly', 'Aqoxy1G02409' => 'aox', 'Aqoxy2G03993' => 'aox', 'Aqoxy3G03357' => 'aox', 'Aqoxy4G00785' => 'aox', 'Aqoxy5G02598' => 'aox', 'Aqoxy6G00132' => 'aox', 'Aqoxy7G01776' => 'aox', 'Aqoxy7G02316' => 'aox', 'Aqoxy7G03973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.12AFKW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B8730' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27IQR1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3F75VG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3RE0GA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41TCQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.527VTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FIR39' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5W8UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DA38EV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ63HS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H1I32C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HC27T5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4M8AP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7N3CZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9UVDZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LS1NQA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT1D4B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SKC4TM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCFV76' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF9Q1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQWD9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1ZM88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WE07RT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YCK7VH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJE6Q6' => 'arhy', 'AT1G28240' => 'ath', 'AT1G34550' => 'ath', 'AT1G53040' => 'ath', 'AT2G02910' => 'ath', 'AT4G09630' => 'ath', 'AT4G38500' => 'ath', 'AT5G42660' => 'ath', 'AT5G46220' => 'ath', 'ATR0152G026' => 'atr', 'ATR0564G343' => 'atr', 'ATR0706G151' => 'atr', 'ATR0733G207' => 'atr', 'ATR0751G234' => 'atr', 'ATR0807G048' => 'atr', 'ATR1091G084' => 'atr', 'Atru.chr10.1229' => 'acertr', 'Atru.chr10.1230' => 'acertr', 'Atru.chr10.1874' => 'acertr', 'Atru.chr11.1808' => 'acertr', 'Atru.chr13.1795' => 'acertr', 'Atru.chr13.570' => 'acertr', 'Atru.chr2.2608' => 'acertr', 'Atru.chr2.2609' => 'acertr', 'Atru.chr5.3428' => 'acertr', 'Atru.chr8.1171' => 'acertr', 'AUR62004651' => 'cqu', 'AUR62008675' => 'cqu', 'AUR62010014' => 'cqu', 'AUR62013004' => 'cqu', 'AUR62014825' => 'cqu', 'AUR62015015' => 'cqu', 'AUR62015151' => 'cqu', 'AUR62017020' => 'cqu', 'AUR62019422' => 'cqu', 'AUR62023570' => 'cqu', 'AUR62025571' => 'cqu', 'AUR62029098' => 'cqu', 'AUR62033863' => 'cqu', 'AUR62034296' => 'cqu', 'AUR62040075' => 'cqu', 'BcaB02g07334' => 'bca', 'BcaB02g10575' => 'bca', 'BcaB03g12119' => 'bca', 'BcaB03g12120' => 'bca', 'BcaB03g13945' => 'bca', 'BcaB04g17123' => 'bca', 'BcaB04g17867' => 'bca', 'BcaB04g19839' => 'bca', 'BcaB07g30317' => 'bca', 'BcaB07g32432' => 'bca', 'BcaB07g33362' => 'bca', 'BcaB08g36611' => 'bca', 'BcaC01g00028' => 'bca', 'BcaC01g01356' => 'bca', 'BcaC01g02034' => 'bca', 'BcaC01g06051' => 'bca', 'BcaC03g16839' => 'bca', 'BcaC03g17176' => 'bca', 'BcaC05g26829' => 'bca', 'BcaC06g31490' => 'bca', 'BcaC06g35344' => 'bca', 'BcaC06g36570' => 'bca', 'BcaC07g37537' => 'bca', 'BcaC08g43491' => 'bca', 'BcaC08g43773' => 'bca', 'BcaNung00234' => 'bca', 'BcaNung01982' => 'bca', 'BcaNung03707' => 'bca', 'BcaNung06454' => 'bca', 'BolC2t10762H' => 'bol', 'BolC2t11191H' => 'bol', 'BolC3t14322H' => 'bol', 'BolC3t19747H' => 'bol', 'BolC3t21425H' => 'bol', 'BolC4t27800H' => 'bol', 'BolC5t31423H' => 'bol', 'BolC6t35951H' => 'bol', 'BolC6t36282H' => 'bol', 'BolC7t40678H' => 'bol', 'BolC7t40679H' => 'bol', 'BolC7t42222H' => 'bol', 'BolC7t43492H' => 'bol', 'BolC7t46785H' => 'bol', 'BolC8t47853H' => 'bol', 'BolC9t56805H' => 'bol', 'BraA02t08000Z' => 'bra', 'BraA02t08341Z' => 'bra', 'BraA03t10936Z' => 'bra', 'BraA03t15657Z' => 'bra', 'BraA04t18100Z' => 'bra', 'BraA05t20523Z' => 'bra', 'BraA06t23353Z' => 'bra', 'BraA06t27473Z' => 'bra', 'BraA06t27769Z' => 'bra', 'BraA07t28928Z' => 'bra', 'BraA08t32236Z' => 'bra', 'BraA08t32841Z' => 'bra', 'BraA08t34524Z' => 'bra', 'BraA09t38742Z' => 'bra', 'BraA09t39295Z' => 'bra', 'C02p47180' => 'bna', 'C02p50990' => 'bna', 'C03p19360' => 'bna', 'C03p74950' => 'bna', 'C03p91000' => 'bna', 'C04p63260' => 'bna', 'C05p27050' => 'bna', 'C06p08750' => 'bna', 'C06p11490' => 'bna', 'C07p02820' => 'bna', 'C07p17180' => 'bna', 'C07p29440' => 'bna', 'C07p63730' => 'bna', 'C09p39260' => 'bna', 'CAN.G1164.34' => 'can', 'CAN.G1164.39' => 'can', 'CAN.G1530.3' => 'can', 'CAN.G162.61' => 'can', 'CAN.G176.6' => 'can', 'CAN.G289.49' => 'can', 'CAN.G370.21' => 'can', 'CAN.G370.22' => 'can', 'CAN.G371.117' => 'can', 'CAN.G58.37' => 'can', 'CAN.G588.98' => 'can', 'CANSAT21G2266' => 'cansat', 'CANSAT25G2799' => 'cansat', 'CANSAT35G0862' => 'cansat', 'CANSAT35G1704' => 'cansat', 'CANSAT35G1760' => 'cansat', 'CANSAT56G3971' => 'cansat', 'CANSAT56G4116' => 'cansat', 'CANSAT80G1259' => 'cansat', 'CARHR027730' => 'chi', 'CARHR033880' => 'chi', 'CARHR043270' => 'chi', 'CARHR145330' => 'chi', 'CARHR145340' => 'chi', 'CARHR175570' => 'chi', 'CARHR181570' => 'chi', 'CARHR258470' => 'chi', 'CARHR260490' => 'chi', 'CARHR294220' => 'chi', 'Carub.0001s2668' => 'cru', 'Carub.0001s3257' => 'cru', 'Carub.0001s4220' => 'cru', 'Carub.0005s0179' => 'cru', 'Carub.0006s2807' => 'cru', 'Carub.0007s0039' => 'cru', 'Carub.0008s0169' => 'cru', 'Carub.0008s0636' => 'cru', 'Ca_00338_v3' => 'car', 'Ca_00542_v3' => 'car', 'Ca_01844_v3' => 'car', 'Ca_10611_v3' => 'car', 'Ca_13326_v3' => 'car', 'Ca_17944_v3' => 'car', 'Ca_18546_v3' => 'car', 'Ca_24219_v3' => 'car', 'Ca_29972_v3' => 'car', 'CBR_g3681' => 'cbr', 'CBR_g40021' => 'cbr', 'Cc01_g08140' => 'ccan', 'Cc02_g13410' => 'ccan', 'Cc02_g37480' => 'ccan', 'Cc05_g12030' => 'ccan', 'Cc09_g03370' => 'ccan', 'Cc09_g10300' => 'ccan', 'Cc10_g03530' => 'ccan', 'Cc10_g11380' => 'ccan', 'CDE01G0176' => 'cde', 'CDE02G0675' => 'cde', 'CDE02G0942' => 'cde', 'CDE02G1153' => 'cde', 'CDE02G4177' => 'cde', 'CDE04G2117' => 'cde', 'CDE04G2736' => 'cde', 'CDE08G1161' => 'cde', 'CDE09G1238' => 'cde', 'Cfa000467' => 'cfa', 'Cfa000947' => 'cfa', 'Cfa004969' => 'cfa', 'Cfa005284' => 'cfa', 'Cfa008993' => 'cfa', 'Cfa018187' => 'cfa', 'Cfa018454' => 'cfa', 'Cfa020585' => 'cfa', 'Ciclev10000424m.g' => 'ccl', 'Ciclev10003605m.g' => 'ccl', 'Ciclev10007828m.g' => 'ccl', 'Ciclev10014620m.g' => 'ccl', 'Ciclev10015169m.g' => 'ccl', 'Ciclev10018291m.g' => 'ccl', 'Ciclev10028256m.g' => 'ccl', 'Ciclev10033822m.g' => 'ccl', 'CiPaw.05G060300' => 'cil', 'CiPaw.05G085000' => 'cil', 'CiPaw.06G083700' => 'cil', 'CiPaw.06G120300' => 'cil', 'CiPaw.09G060500' => 'cil', 'CiPaw.09G123800' => 'cil', 'CiPaw.11G169700' => 'cil', 'CiPaw.12G118300' => 'cil', 'CiPaw.15G071000' => 'cil', 'CiPaw.15G081900' => 'cil', 'ClCG01G024610' => 'cla', 'ClCG03G006070' => 'cla', 'ClCG05G019250' => 'cla', 'ClCG09G009500' => 'cla', 'ClCG11G008200' => 'cla', 'ClCG11G018080' => 'cla', 'COL.COLO4_17373' => 'col', 'COL.COLO4_22994' => 'col', 'COL.COLO4_26389' => 'col', 'COL.COLO4_27170' => 'col', 'COL.COLO4_31074' => 'col', 'COL.COLO4_31465' => 'col', 'COL.COLO4_36438' => 'col', 'COL.COLO4_36439' => 'col', 'Cpa.g.c38781' => 'cpa', 'Cpa.g.sc128.12' => 'cpa', 'Cpa.g.sc166.7' => 'cpa', 'Cpa.g.sc166.8' => 'cpa', 'Cpa.g.sc20.111' => 'cpa', 'Cpa.g.sc27.31' => 'cpa', 'Cpa.g.sc64.36' => 'cpa', 'Cpa.g.sc64.37' => 'cpa', 'Cpa.g.sc66.49' => 'cpa', 'Cpa.g.sc80.64' => 'cpa', 'CsaV3_1G012320' => 'csa', 'CsaV3_2G008480' => 'csa', 'CsaV3_2G033450' => 'csa', 'CsaV3_3G044830' => 'csa', 'CsaV3_4G033710' => 'csa', 'CsaV3_6G051730' => 'csa', 'CsaV3_7G025350' => 'csa', 'CSS0001067' => 'camsi', 'CSS0005996' => 'camsi', 'CSS0006590' => 'camsi', 'CSS0009673' => 'camsi', 'CSS0010201' => 'camsi', 'CSS0010549' => 'camsi', 'CSS0011364' => 'camsi', 'CSS0014473' => 'camsi', 'CSS0014961' => 'camsi', 'CSS0020191' => 'camsi', 'CSS0021165' => 'camsi', 'CSS0022306' => 'camsi', 'CSS0030591' => 'camsi', 'CSS0030696' => 'camsi', 'CSS0032653' => 'camsi', 'CSS0037487' => 'camsi', 'CSS0041102' => 'camsi', 'CSS0041261' => 'camsi', 'CSS0046246' => 'camsi', 'CSS0049256' => 'camsi', 'DCAR_004075' => 'dca', 'DCAR_011538' => 'dca', 'DCAR_019553' => 'dca', 'DCAR_020952' => 'dca', 'DCAR_021739' => 'dca', 'DCAR_027407' => 'dca', 'DCAR_027913' => 'dca', 'DCAR_028066' => 'dca', 'Dinv05899' => 'din', 'Dinv07563' => 'din', 'Dinv08010' => 'din', 'Dinv14125' => 'din', 'Dinv20172' => 'din', 'Dinv30743' => 'din', 'Dinv31229' => 'din', 'Dinv34162' => 'din', 'Dinv36028' => 'din', 'Dinv39368' => 'din', 'Dinv40565' => 'din', 'Dinv41706' => 'din', 'Duzib052G0089' => 'dzi', 'Duzib116G0641' => 'dzi', 'Duzib132G0069' => 'dzi', 'Duzib132G1219' => 'dzi', 'Duzib147G0278' => 'dzi', 'Duzib160G0480' => 'dzi', 'Duzib170G0661' => 'dzi', 'Duzib177G0591' => 'dzi', 'Duzib187G1353' => 'dzi', 'Duzib192G0858' => 'dzi', 'Duzib192G0883' => 'dzi', 'Duzib213G0506' => 'dzi', 'Duzib235G0289' => 'dzi', 'Duzib251G0422' => 'dzi', 'ECA232G3898' => 'eca', 'ECA233G5950' => 'eca', 'ECA234G1699' => 'eca', 'ECA234G2421' => 'eca', 'ECA236G0426' => 'eca', 'ECA236G4331' => 'eca', 'ECA248G2573' => 'eca', 'EL10Ac1g00077' => 'bvu', 'EL10Ac1g01746' => 'bvu', 'EL10Ac2g03464' => 'bvu', 'EL10Ac4g08176' => 'bvu', 'EL10Ac7g17521' => 'bvu', 'EL10Ac8g20386' => 'bvu', 'EL10Ac9g21343' => 'bvu', 'EL10Ac9g22688' => 'bvu', 'Eucgr.B03434' => 'egr', 'Eucgr.D00618' => 'egr', 'Eucgr.E02395' => 'egr', 'Eucgr.F01129' => 'egr', 'Eucgr.F02622' => 'egr', 'Eucgr.F04207' => 'egr', 'FAN01G0570' => 'fan', 'FAN03G3351' => 'fan', 'FAN06G3702' => 'fan', 'FAN07G2149' => 'fan', 'FAN10G3758' => 'fan', 'FAN11G1170' => 'fan', 'FAN11G2050' => 'fan', 'FAN11G2724' => 'fan', 'FAN12G1700' => 'fan', 'FAN12G2028' => 'fan', 'FAN15G1160' => 'fan', 'FAN15G3063' => 'fan', 'FAN16G2540' => 'fan', 'FAN16G3077' => 'fan', 'FAN16G3624' => 'fan', 'FAN17G0221' => 'fan', 'FAN20G2492' => 'fan', 'FAN20G2905' => 'fan', 'FAN21G0548' => 'fan', 'FAN21G1300' => 'fan', 'FAN22G0077' => 'fan', 'FAN22G1315' => 'fan', 'FAN24G1280' => 'fan', 'FAN24G1445' => 'fan', 'FAN24G3527' => 'fan', 'FAN25G0464' => 'fan', 'FAN25G2885' => 'fan', 'FAN25G3270' => 'fan', 'FAN27G1101' => 'fan', 'FAN27G2846' => 'fan', 'FAN27G3524' => 'fan', 'FvH4_2g11770' => 'fve', 'FvH4_2g15630' => 'fve', 'FvH4_3g05570' => 'fve', 'FvH4_3g09110' => 'fve', 'FvH4_3g19940' => 'fve', 'FvH4_4g04821' => 'fve', 'FvH4_4g31480' => 'fve', 'FvH4_7g01740' => 'fve', 'Glyma.05G130400' => 'gma', 'Glyma.05G156400' => 'gma', 'Glyma.07G197000' => 'gma', 'Glyma.08G085151' => 'gma', 'Glyma.08G114500' => 'gma', 'Glyma.08G300400' => 'gma', 'Glyma.10G215800' => 'gma', 'Glyma.12G224400' => 'gma', 'Glyma.13G179300' => 'gma', 'Glyma.13G218151' => 'gma', 'Glyma.13G238800' => 'gma', 'Glyma.13G276900' => 'gma', 'Glyma.14G078200' => 'gma', 'Glyma.15G074500' => 'gma', 'Glyma.15G094100' => 'gma', 'Glyma.17G247200' => 'gma', 'Glyma.18G120100' => 'gma', 'Glyma.20G176000' => 'gma', 'Gohir.A01G063600' => 'ghi', 'Gohir.A01G170301' => 'ghi', 'Gohir.A02G060500' => 'ghi', 'Gohir.A05G133850' => 'ghi', 'Gohir.A05G161400' => 'ghi', 'Gohir.A06G012900' => 'ghi', 'Gohir.A06G035901' => 'ghi', 'Gohir.A06G127100' => 'ghi', 'Gohir.A06G210500' => 'ghi', 'Gohir.A08G008650' => 'ghi', 'Gohir.A09G072700' => 'ghi', 'Gohir.A09G088301' => 'ghi', 'Gohir.A10G040600' => 'ghi', 'Gohir.A12G036300' => 'ghi', 'Gohir.A12G143350' => 'ghi', 'Gohir.A12G165500' => 'ghi', 'Gohir.A13G145700' => 'ghi', 'Gohir.D01G050000' => 'ghi', 'Gohir.D01G051366' => 'ghi', 'Gohir.D01G161350' => 'ghi', 'Gohir.D02G065900' => 'ghi', 'Gohir.D05G164200' => 'ghi', 'Gohir.D05G355500' => 'ghi', 'Gohir.D06G010400' => 'ghi', 'Gohir.D06G111250' => 'ghi', 'Gohir.D06G132000' => 'ghi', 'Gohir.D06G210500' => 'ghi', 'Gohir.D07G165675' => 'ghi', 'Gohir.D08G062240' => 'ghi', 'Gohir.D08G086101' => 'ghi', 'Gohir.D08G138060' => 'ghi', 'Gohir.D09G072300' => 'ghi', 'Gohir.D10G041400' => 'ghi', 'Gohir.D11G191020' => 'ghi', 'Gohir.D11G212066' => 'ghi', 'Gohir.D12G036300' => 'ghi', 'Gohir.D12G168600' => 'ghi', 'Gohir.D13G150600' => 'ghi', 'Gorai.001G057300' => 'gra', 'Gorai.002G069900' => 'gra', 'Gorai.002G200000' => 'gra', 'Gorai.003G067600' => 'gra', 'Gorai.005G074800' => 'gra', 'Gorai.006G087300' => 'gra', 'Gorai.008G037500' => 'gra', 'Gorai.008G181400' => 'gra', 'Gorai.009G169400' => 'gra', 'Gorai.009G387900' => 'gra', 'Gorai.010G013300' => 'gra', 'Gorai.010G153800' => 'gra', 'Gorai.010G255800' => 'gra', 'Gorai.011G043700' => 'gra', 'Gorai.011G198900' => 'gra', 'Gorai.013G168400' => 'gra', 'GSVIVG01005212001' => 'vvi', 'GSVIVG01006163001' => 'vvi', 'GSVIVG01009625001' => 'vvi', 'GSVIVG01014338001' => 'vvi', 'GSVIVG01020005001' => 'vvi', 'GSVIVG01021450001' => 'vvi', 'GSVIVG01023975001' => 'vvi', 'GSVIVG01034490001' => 'vvi', 'HanXRQChr04g0112071' => 'han', 'HanXRQChr05g0131151' => 'han', 'HanXRQChr09g0262371' => 'han', 'HanXRQChr09g0268401' => 'han', 'HanXRQChr10g0279241' => 'han', 'HanXRQChr10g0297961' => 'han', 'HanXRQChr11g0326231' => 'han', 'HanXRQChr11g0328471' => 'han', 'HanXRQChr16g0507941' => 'han', 'HanXRQChr17g0560211' => 'han', 'Haze_02108' => 'cav', 'Haze_02428' => 'cav', 'Haze_05593' => 'cav', 'Haze_06448' => 'cav', 'Haze_09427' => 'cav', 'Haze_12022' => 'cav', 'Haze_17612' => 'cav', 'Haze_17928' => 'cav', 'Hma1.2p1_0032F.1_g019250' => 'hma', 'Hma1.2p1_0163F.1_g072690' => 'hma', 'Hma1.2p1_0265F.1_g106710' => 'hma', 'Hma1.2p1_0286F.1_g113970' => 'hma', 'Hma1.2p1_0363F.1_g136640' => 'hma', 'Hma1.2p1_0584F.1_g183470' => 'hma', 'Hma1.2p1_0885F.1_g232570' => 'hma', 'HPP92_006022' => 'vpl', 'HPP92_007320' => 'vpl', 'HPP92_011521' => 'vpl', 'HPP92_019387' => 'vpl', 'HPP92_024038' => 'vpl', 'Hund05891' => 'sun', 'Hund06450' => 'sun', 'Hund12053' => 'sun', 'Hund16800' => 'sun', 'Hund21222' => 'sun', 'Hund22896' => 'sun', 'Hund23746' => 'sun', 'Hund27083' => 'sun', 'Lalb_Chr02g0141831' => 'lal', 'Lalb_Chr02g0141841' => 'lal', 'Lalb_Chr05g0220411' => 'lal', 'Lalb_Chr06g0162081' => 'lal', 'Lalb_Chr09g0327651' => 'lal', 'Lalb_Chr13g0295051' => 'lal', 'Lalb_Chr15g0086801' => 'lal', 'Lalb_Chr16g0383781' => 'lal', 'Lalb_Chr16g0383791' => 'lal', 'Lalb_Chr18g0055441' => 'lal', 'Lalb_Chr18g0059611' => 'lal', 'Lalb_Chr20g0109661' => 'lal', 'Lalb_Chr20g0109831' => 'lal', 'Lalb_Chr20g0121871' => 'lal', 'Lalb_Chr22g0355361' => 'lal', 'Lalb_Chr25g0286371' => 'lal', 'Lj1A1187G43' => 'lonja', 'Lj1A1205T50' => 'lonja', 'Lj1A800G33' => 'lonja', 'Lj1C1187T7' => 'lonja', 'Lj1C843T11' => 'lonja', 'Lj1g0010940' => 'lja', 'Lj2A288T69' => 'lonja', 'Lj3g0024276' => 'lja', 'Lj4A47T76' => 'lonja', 'Lj4g0005805' => 'lja', 'Lj4g0006097' => 'lja', 'Lj4g0008528' => 'lja', 'Lj4g0024907' => 'lja', 'Lj5g0012472' => 'lja', 'Lj5g0018648' => 'lja', 'Lj6C789G1' => 'lonja', 'Lj6g0004000' => 'lja', 'Lj7A292G67' => 'lonja', 'Lj7A292T64' => 'lonja', 'Lj9A400T58' => 'lonja', 'Lsat_1_v5_gn_1_126181' => 'lsa', 'Lsat_1_v5_gn_4_123041' => 'lsa', 'Lsat_1_v5_gn_4_133620' => 'lsa', 'Lsat_1_v5_gn_4_53221' => 'lsa', 'Lsat_1_v5_gn_4_71961' => 'lsa', 'Lsat_1_v5_gn_7_105241' => 'lsa', 'Lsat_1_v5_gn_7_21361' => 'lsa', 'Lsat_1_v5_gn_7_28860' => 'lsa', 'Lsat_1_v5_gn_7_31260' => 'lsa', 'Lsat_1_v5_gn_8_52801' => 'lsa', 'Manes.02G191400' => 'mes', 'Manes.03G110100' => 'mes', 'Manes.04G071100' => 'mes', 'Manes.05G100500' => 'mes', 'Manes.05G164700' => 'mes', 'Manes.15G087000' => 'mes', 'Manes.15G121500' => 'mes', 'Manes.16G028300' => 'mes', 'Manes.17G046100' => 'mes', 'Manes.17G069800' => 'mes', 'Manes.18G100500' => 'mes', 'Mapoly0002s0109' => 'mpo', 'Mapoly0024s0007' => 'mpo', 'Mapoly0089s0032' => 'mpo', 'MBI04_g42241_MAGBIO' => 'mbi', 'MBI05_g11988_MAGBIO' => 'mbi', 'MBI05_g35452_MAGBIO' => 'mbi', 'MBI07_g30179_MAGBIO' => 'mbi', 'MBI07_g35859_MAGBIO' => 'mbi', 'MBI07_g35860_MAGBIO' => 'mbi', 'MBI07_g37166_MAGBIO' => 'mbi', 'MBI08_g18172_MAGBIO' => 'mbi', 'MBI09_g08441_MAGBIO' => 'mbi', 'MBI13_g01676_MAGBIO' => 'mbi', 'MBI14_g42955_MAGBIO' => 'mbi', 'MBI16_g13161_MAGBIO' => 'mbi', 'MBI17_g27204_MAGBIO' => 'mbi', 'MBI19_g21595_MAGBIO' => 'mbi', 'MD00G1148400' => 'mdo', 'MD02G1301200' => 'mdo', 'MD03G1227800' => 'mdo', 'MD05G1041100' => 'mdo', 'MD05G1124800' => 'mdo', 'MD05G1284000' => 'mdo', 'MD05G1338800' => 'mdo', 'MD05G1338900' => 'mdo', 'MD07G1022800' => 'mdo', 'MD10G1047500' => 'mdo', 'MD10G1127500' => 'mdo', 'MD10G1262300' => 'mdo', 'MD10G1293800' => 'mdo', 'MD16G1074300' => 'mdo', 'Medtr1g021670' => 'mtr', 'Medtr1g096320' => 'mtr', 'Medtr2g013690' => 'mtr', 'Medtr2g019450' => 'mtr', 'Medtr2g085170' => 'mtr', 'Medtr4g088785' => 'mtr', 'Medtr8g055930' => 'mtr', 'Medtr8g085850' => 'mtr', 'MELO3C002605.2' => 'cme', 'MELO3C003891.2' => 'cme', 'MELO3C004012.2' => 'cme', 'MELO3C007134.2' => 'cme', 'MELO3C008118.2' => 'cme', 'MELO3C016700.2' => 'cme', 'MELO3C024127.2' => 'cme', 'MELO3C033361.2' => 'cme', 'MELO3C033362.2' => 'cme', 'Migut.C00430' => 'egut', 'Migut.C01246' => 'egut', 'Migut.E00101' => 'egut', 'Migut.H01486' => 'egut', 'Migut.H01939' => 'egut', 'Migut.K00360' => 'egut', 'Migut.M00910' => 'egut', 'Migut.M01139' => 'egut', 'Migut.N02677' => 'egut', 'MSTRG.13252' => 'ama', 'MSTRG.14701' => 'ama', 'MSTRG.1521' => 'ama', 'MSTRG.15884' => 'ama', 'MSTRG.16242' => 'ama', 'MSTRG.22285' => 'ama', 'MSTRG.22444' => 'ama', 'MSTRG.2349' => 'ama', 'MSTRG.26308' => 'ama', 'MSTRG.28296' => 'ama', 'MSTRG.9895' => 'ama', 'Nitab4.5_0000110g0060' => 'nta', 'Nitab4.5_0000420g0130' => 'nta', 'Nitab4.5_0000422g0030' => 'nta', 'Nitab4.5_0000560g0180' => 'nta', 'Nitab4.5_0000703g0100' => 'nta', 'Nitab4.5_0000786g0200' => 'nta', 'Nitab4.5_0001336g0020' => 'nta', 'Nitab4.5_0001796g0030' => 'nta', 'Nitab4.5_0003348g0060' => 'nta', 'Nitab4.5_0003698g0040' => 'nta', 'Nitab4.5_0003942g0090' => 'nta', 'Nitab4.5_0004775g0070' => 'nta', 'Nitab4.5_0004864g0030' => 'nta', 'Nitab4.5_0005615g0020' => 'nta', 'Nitab4.5_0009288g0030' => 'nta', 'Nitab4.5_0009341g0010' => 'nta', 'Nitab4.5_0009535g0010' => 'nta', 'Nn1g03995' => 'nnu', 'Nn1g04100' => 'nnu', 'Nn1g06530' => 'nnu', 'Nn3g16404' => 'nnu', 'Nn3g17212' => 'nnu', 'Nn3g20776' => 'nnu', 'Nn3g21923' => 'nnu', 'Nn5g27737' => 'nnu', 'Nn5g29461' => 'nnu', 'Nn7g38355' => 'nnu', 'Nn8g39873' => 'nnu', 'Oeu000548.2' => 'oeu', 'Oeu004672.1' => 'oeu', 'Oeu015605.2' => 'oeu', 'Oeu016092.1' => 'oeu', 'Oeu017879.3' => 'oeu', 'Oeu024910.1' => 'oeu', 'Oeu028965.1' => 'oeu', 'Oeu031269.1' => 'oeu', 'Oeu031270.1' => 'oeu', 'Oeu032535.1' => 'oeu', 'Oeu034151.1' => 'oeu', 'Oeu034152.1' => 'oeu', 'Oeu034588.2' => 'oeu', 'Oeu050846.1' => 'oeu', 'Oeu050849.2' => 'oeu', 'Oeu051063.2' => 'oeu', 'Oeu052368.1' => 'oeu', 'Oeu052370.1' => 'oeu', 'Os01g0210400' => 'osa', 'Os01g0304300' => 'osa', 'Os01g0749100' => 'osa', 'Os02g0745800' => 'osa', 'Os03g0769050' => 'osa', 'Os05g0531500' => 'osa', 'Os06g0724300' => 'osa', 'Os11g0198100' => 'osa', 'Peaxi162Scf00069g01425' => 'pax', 'Peaxi162Scf00280g00811' => 'pax', 'Peaxi162Scf00310g00615' => 'pax', 'Peaxi162Scf00362g00542' => 'pax', 'Peaxi162Scf00461g00310' => 'pax', 'Peaxi162Scf00530g00118' => 'pax', 'Peaxi162Scf00541g00057' => 'pax', 'Peaxi162Scf00661g00017' => 'pax', 'Peaxi162Scf00926g00027' => 'pax', 'Peaxi162Scf01064g00263' => 'pax', 'Peaxi162Scf01211g00135' => 'pax', 'PGR004G2336' => 'pgr', 'PGR042G0327' => 'pgr', 'PGR042G1957' => 'pgr', 'PGR042G2003' => 'pgr', 'PGR042G3929' => 'pgr', 'PGR083G1137' => 'pgr', 'PGR083G1364' => 'pgr', 'PGSC0003DMG400003381' => 'stu', 'PGSC0003DMG400003417' => 'stu', 'PGSC0003DMG400008981' => 'stu', 'PGSC0003DMG400012417' => 'stu', 'PGSC0003DMG400012823' => 'stu', 'PGSC0003DMG400016885' => 'stu', 'PGSC0003DMG400022812' => 'stu', 'PGSC0003DMG400029726' => 'stu', 'PGSC0003DMG401009243' => 'stu', 'PGSC0003DMG401031505' => 'stu', 'PGSC0003DMG402031505' => 'stu', 'Phvul.001G017600' => 'pvu', 'Phvul.002G193500' => 'pvu', 'Phvul.002G228900' => 'pvu', 'Phvul.002G236800' => 'pvu', 'Phvul.003G049500' => 'pvu', 'Phvul.005G072000' => 'pvu', 'Phvul.006G164800' => 'pvu', 'Phvul.006G185100' => 'pvu', 'Phvul.007G090000' => 'pvu', 'Potri.001G399800' => 'ptr', 'Potri.002G149900' => 'ptr', 'Potri.004G044100' => 'ptr', 'Potri.004G177600' => 'ptr', 'Potri.009G138000' => 'ptr', 'Potri.010G094000' => 'ptr', 'Potri.011G053000' => 'ptr', 'Potri.011G119300' => 'ptr', 'Potri.013G113700' => 'ptr', 'Potri.018G107800' => 'ptr', 'Potri.019G084100' => 'ptr', 'Pp3c14_23720' => 'ppa', 'Pp3c16_6340' => 'ppa', 'Pp3c23_13420' => 'ppa', 'Pp3c24_2740' => 'ppa', 'Pp3c25_860' => 'ppa', 'Pp3c8_21750' => 'ppa', 'Prupe.1G273000' => 'ppe', 'Prupe.1G273700' => 'ppe', 'Prupe.1G274100' => 'ppe', 'Prupe.2G023300' => 'ppe', 'Prupe.4G048000' => 'ppe', 'Prupe.4G080400' => 'ppe', 'Prupe.4G181200' => 'ppe', 'Prupe.8G056900' => 'ppe', 'Prupe.8G168700' => 'ppe', 'Psat1g189080' => 'psa', 'Psat1g204760' => 'psa', 'Psat4g175560' => 'psa', 'Psat4g177720' => 'psa', 'Psat5g244240' => 'psa', 'Psat6g010720' => 'psa', 'Psat6g187200' => 'psa', 'Psat7g072040' => 'psa', 'PSO017G3501' => 'pso', 'PSO063G2148' => 'pso', 'PSO063G5608' => 'pso', 'PSO210G6392' => 'pso', 'PSO541G2319' => 'pso', 'PSO541G2836' => 'pso', 'PSO541G4012' => 'pso', 'PSO541G6253' => 'pso', 'PSO675G0580' => 'pso', 'PSO675G0856' => 'pso', 'PSO675G5635' => 'pso', 'PSO675G9157' => 'pso', 'PSO832G1660' => 'pso', 'PSO832G1969' => 'pso', 'QL02p007186' => 'qlo', 'QL02p033904' => 'qlo', 'QL03p064391' => 'qlo', 'QL05p040593' => 'qlo', 'QL05p058242' => 'qlo', 'QL08p021825' => 'qlo', 'QL11p004981' => 'qlo', 'RcHm_v2.0_Chr1g0318301' => 'rch', 'RcHm_v2.0_Chr4g0418501' => 'rch', 'RcHm_v2.0_Chr4g0439971' => 'rch', 'RcHm_v2.0_Chr5g0008541' => 'rch', 'RcHm_v2.0_Chr5g0014101' => 'rch', 'RcHm_v2.0_Chr5g0014131' => 'rch', 'RcHm_v2.0_Chr5g0033621' => 'rch', 'RcHm_v2.0_Chr6g0272041' => 'rch', 'RcHm_v2.0_Chr6g0278831' => 'rch', 'Rhsim02G0130400' => 'rsi', 'Rhsim02G0171100' => 'rsi', 'Rhsim05G0053000' => 'rsi', 'Rhsim05G0053100' => 'rsi', 'Rhsim06G0096500' => 'rsi', 'Rhsim06G0096600' => 'rsi', 'Rhsim06G0199100' => 'rsi', 'Rhsim12G0062300' => 'rsi', 'Rhsim12G0062800' => 'rsi', 'Sabra02G0118600' => 'sbr', 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'Solyc03g079860.2' => 'sly', 'Solyc04g079770.3' => 'sly', 'Solyc05g007430.4' => 'sly', 'Solyc07g063150.3' => 'sly', 'Solyc08g016620.3' => 'sly', 'Solyc09g057590.3' => 'sly', 'Solyc09g057600.1' => 'sly', 'Solyc10g009050.3' => 'sly', 'Solyc11g017420.2' => 'sly', 'Sopen01g053810' => 'spe', 'Sopen02g023040' => 'spe', 'Sopen03g002440' => 'spe', 'Sopen04g033350' => 'spe', 'Sopen05g003310' => 'spe', 'Sopen07g004050' => 'spe', 'Sopen07g031340' => 'spe', 'Sopen08g006990' => 'spe', 'Sopen10g004830' => 'spe', 'Sopen11g009370' => 'spe', 'Sp1g24450' => 'spa', 'Sp1g29670' => 'spa', 'Sp1g39600' => 'spa', 'Sp2g11080' => 'spa', 'Sp2g13970' => 'spa', 'Sp4g16130' => 'spa', 'Sp6g13080' => 'spa', 'Sp7g37270' => 'spa', 'TAR371G0065' => 'tar', 'TAR376G0340' => 'tar', 'TAR376G0435' => 'tar', 'TAR381G0002' => 'tar', 'TAR381G1236' => 'tar', 'TAR624G0055' => 'tar', 'TAR624G0324' => 'tar', 'TAR624G0696' => 'tar', 'TAR624G0906' => 'tar', 'TAR625G0107' => 'tar', 'TAR626G0015' => 'tar', 'TAR626G1356' => 'tar', 'TAR627G0888' => 'tar', 'TAR628G0399' => 'tar', 'TAR628G1327' => 'tar', 'TAR629G2831' => 'tar', 'TAR629G2874' => 'tar', 'TAR633G1432' => 'tar', 'TAR633G2771' => 'tar', 'THA.LOC104803394' => 'tha', 'THA.LOC104805153' => 'tha', 'THA.LOC104806784' => 'tha', 'THA.LOC104810473' => 'tha', 'THA.LOC104813100' => 'tha', 'THA.LOC104814215' => 'tha', 'THA.LOC104815554' => 'tha', 'THA.LOC104820544' => 'tha', 'THA.LOC104824754' => 'tha', 'THA.LOC104827717' => 'tha', 'Thecc.02G031400' => 'tca', 'Thecc.02G055900' => 'tca', 'Thecc.02G350800' => 'tca', 'Thecc.06G150900' => 'tca', 'Thecc.06G186600' => 'tca', 'Thecc.07G089600' => 'tca', 'Thecc.08G020400' => 'tca', 'Thecc.08G182100' => 'tca', 'Thhalv10000873m.g' => 'esa', 'Thhalv10004185m.g' => 'esa', 'Thhalv10006981m.g' => 'esa', 'Thhalv10007204m.g' => 'esa', 'Thhalv10011374m.g' => 'esa', 'Thhalv10013482m.g' => 'esa', 'Thhalv10017801m.g' => 'esa', 'Thhalv10024983m.g' => 'esa', 'TPR.G12072' => 'tpr', 'TPR.G15769' => 'tpr', 'TPR.G16504' => 'tpr', 'TPR.G16506' => 'tpr', 'TPR.G24345' => 'tpr', 'TPR.G26666' => 'tpr', 'TPR.G27320' => 'tpr', 'TPR.G31819' => 'tpr', 'TPR.G38879' => 'tpr', 'TPR.G39015' => 'tpr', 'TPR.G8819' => 'tpr', 'TWI09G0924' => 'twi', 'TWI12G0811' => 'twi', 'TWI12G1294' => 'twi', 'TWI31G0150' => 'twi', 'TWI36G1262' => 'twi', 'TWI38G1287' => 'twi', 'TWI38G1633' => 'twi', 'TWI38G1982' => 'twi', 'TWI39G0116' => 'twi', 'TWI60G1011' => 'twi', 'TWI63G0171' => 'twi', 'TWI73G0839' => 'twi', 'TWI79G1511' => 'twi', 'unitig_0.g915' => 'ugi', 'unitig_0.g916' => 'ugi', 'unitig_21.g20219' => 'ugi', 'unitig_21.g20416' => 'ugi', 'unitig_578.g16132' => 'ugi', 'unitig_578.g16718' => 'ugi', 'unitig_62.g23481' => 'ugi', 'unitig_744.g24535' => 'ugi', 'unitig_749.g13525' => 'ugi', 'vmacro01248' => 'vma', 'vmacro02290' => 'vma', 'vmacro10946' => 'vma', 'vmacro11865' => 'vma', 'vmacro12493' => 'vma', 'vmacro17322' => 'vma', 'vmacro21599' => 'vma', 'vmacro23041' => 'vma', 'VMungo0251G0004' => 'vmu', 'VMungo0251G2639' => 'vmu', 'VMungo0251G2967' => 'vmu', 'VMungo0540G0864' => 'vmu', 'VMungo0540G1569' => 'vmu', 'VMungo0647G0317' => 'vmu', 'VMungo0720G1373' => 'vmu', 'VMungo0720G1508' => 'vmu', 'VMungo1080G0485' => 'vmu', 'VMungo1215G3177' => 'vmu', 'Zm00001eb112600' => 'zma', 'Zm00001eb120220' => 'zma', 'Zm00001eb153240' => 'zma', 'Zm00001eb168880' => 'zma', 'Zm00001eb213920' => 'zma', 'Zm00001eb228280' => 'zma', 'Zm00001eb254580' => 'zma', 'Zm00001eb272180' => 'zma', 'Zm00001eb293190' => 'zma', 'Zm00001eb322930' => 'zma', 'Zm00001eb353360' => 'zma', 'Zm00001eb353390' => 'zma', 'Zm00001eb353430' => 'zma', 'Zm00001eb353440' => 'zma', 'Zm00001eb353780' => 'zma' ), 'gf_id' => 'HOM05D000499', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000499' ), 'data_identifier' => 'HOM05D000499', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000499', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1066', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p29780' => 'bna', 'A02p33180' => 'bna', 'A03p16470' => 'bna', 'A03p66010' => 'bna', 'A04p25970' => 'bna', 'A06p01270' => 'bna', 'A06p46080' => 'bna', 'A07p11400' => 'bna', 'A08p01840' => 'bna', 'A08p08230' => 'bna', 'A08p25740' => 'bna', 'A09p32070' => 'bna', 'A09p37830' => 'bna', 'A09p42840' => 'bna', 'A09p42850' => 'bna', 'Aa31LG10G2060' => 'aar', 'Aa31LG2G7410' => 'aar', 'Aa31LG6G10200' => 'aar', 'Aa31LG6G16680' => 'aar', 'Aa31LG6G8470' => 'aar', 'Aa31LG9G12730' => 'aar', 'Aa31LG9G13680' => 'aar', 'Aa31LG9G14920' => 'aar', 'Aa31LG9G6650' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4977' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5467' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3254' => 'aag', 'Actinidia02578' => 'ach', 'Actinidia07693' => 'ach', 'Actinidia08413' => 'ach', 'Actinidia08414' => 'ach', 'Actinidia15289' => 'ach', 'Actinidia19871' => 'ach', 'Actinidia21475' => 'ach', 'Actinidia22576' => 'ach', 'Actinidia28327' => 'ach', 'Actinidia32491' => 'ach', 'Actinidia39463' => 'ach', 'Actinidia39571' => 'ach', 'Ah.01g013750' => 'amhyb', 'Ah.01g023210' => 'amhyb', 'Ah.04g164850' => 'amhyb', 'Ah.05g178060' => 'amhyb', 'Ah.07g204270' => 'amhyb', 'Ah.07g208480' => 'amhyb', 'Ah.09g237410' => 'amhyb', 'Ah.14g089460' => 'amhyb', 'AL1G41790' => 'aly', 'AL1G49050' => 'aly', 'AL1G53810' => 'aly', 'AL1G61400' => 'aly', 'AL4G18580' => 'aly', 'AL5G12510' => 'aly', 'AL5G12540' => 'aly', 'AL6G43230' => 'aly', 'AL7G10370' => 'aly', 'AL7G19250' => 'aly', 'AL8G12240' => 'aly', 'AL8G18540' => 'aly', 'Aqoxy1G02409' => 'aox', 'Aqoxy2G03993' => 'aox', 'Aqoxy3G03357' => 'aox', 'Aqoxy4G00785' => 'aox', 'Aqoxy5G02598' => 'aox', 'Aqoxy6G00132' => 'aox', 'Aqoxy7G01776' => 'aox', 'Aqoxy7G02316' => 'aox', 'Aqoxy7G03973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.12AFKW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B8730' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27IQR1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3F75VG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3RE0GA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41TCQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.527VTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FIR39' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5W8UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DA38EV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ63HS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H1I32C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HC27T5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4M8AP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7N3CZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9UVDZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LS1NQA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT1D4B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SKC4TM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCFV76' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF9Q1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQWD9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1ZM88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WE07RT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YCK7VH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJE6Q6' => 'arhy', 'AT1G28240' => 'ath', 'AT1G34550' => 'ath', 'AT1G53040' => 'ath', 'AT2G02910' => 'ath', 'AT4G09630' => 'ath', 'AT4G38500' => 'ath', 'AT5G42660' => 'ath', 'AT5G46220' => 'ath', 'ATR0152G026' => 'atr', 'ATR0564G343' => 'atr', 'ATR0706G151' => 'atr', 'ATR0733G207' => 'atr', 'ATR0751G234' => 'atr', 'ATR0807G048' => 'atr', 'ATR1091G084' => 'atr', 'Atru.chr10.1229' => 'acertr', 'Atru.chr10.1230' => 'acertr', 'Atru.chr10.1874' => 'acertr', 'Atru.chr11.1808' => 'acertr', 'Atru.chr13.1795' => 'acertr', 'Atru.chr13.570' => 'acertr', 'Atru.chr2.2608' => 'acertr', 'Atru.chr2.2609' => 'acertr', 'Atru.chr5.3428' => 'acertr', 'Atru.chr8.1171' => 'acertr', 'AUR62004651' => 'cqu', 'AUR62008675' => 'cqu', 'AUR62010014' => 'cqu', 'AUR62013004' => 'cqu', 'AUR62014825' => 'cqu', 'AUR62015015' => 'cqu', 'AUR62015151' => 'cqu', 'AUR62017020' => 'cqu', 'AUR62019422' => 'cqu', 'AUR62023570' => 'cqu', 'AUR62025571' => 'cqu', 'AUR62029098' => 'cqu', 'AUR62033863' => 'cqu', 'AUR62034296' => 'cqu', 'AUR62040075' => 'cqu', 'BcaB02g07334' => 'bca', 'BcaB02g10575' => 'bca', 'BcaB03g12119' => 'bca', 'BcaB03g12120' => 'bca', 'BcaB03g13945' => 'bca', 'BcaB04g17123' => 'bca', 'BcaB04g17867' => 'bca', 'BcaB04g19839' => 'bca', 'BcaB07g30317' => 'bca', 'BcaB07g32432' => 'bca', 'BcaB07g33362' => 'bca', 'BcaB08g36611' => 'bca', 'BcaC01g00028' => 'bca', 'BcaC01g01356' => 'bca', 'BcaC01g02034' => 'bca', 'BcaC01g06051' => 'bca', 'BcaC03g16839' => 'bca', 'BcaC03g17176' => 'bca', 'BcaC05g26829' => 'bca', 'BcaC06g31490' => 'bca', 'BcaC06g35344' => 'bca', 'BcaC06g36570' => 'bca', 'BcaC07g37537' => 'bca', 'BcaC08g43491' => 'bca', 'BcaC08g43773' => 'bca', 'BcaNung00234' => 'bca', 'BcaNung01982' => 'bca', 'BcaNung03707' => 'bca', 'BcaNung06454' => 'bca', 'BolC2t10762H' => 'bol', 'BolC2t11191H' => 'bol', 'BolC3t14322H' => 'bol', 'BolC3t19747H' => 'bol', 'BolC3t21425H' => 'bol', 'BolC4t27800H' => 'bol', 'BolC5t31423H' => 'bol', 'BolC6t35951H' => 'bol', 'BolC6t36282H' => 'bol', 'BolC7t40678H' => 'bol', 'BolC7t40679H' => 'bol', 'BolC7t42222H' => 'bol', 'BolC7t43492H' => 'bol', 'BolC7t46785H' => 'bol', 'BolC8t47853H' => 'bol', 'BolC9t56805H' => 'bol', 'BraA02t08000Z' => 'bra', 'BraA02t08341Z' => 'bra', 'BraA03t10936Z' => 'bra', 'BraA03t15657Z' => 'bra', 'BraA04t18100Z' => 'bra', 'BraA05t20523Z' => 'bra', 'BraA06t23353Z' => 'bra', 'BraA06t27473Z' => 'bra', 'BraA06t27769Z' => 'bra', 'BraA07t28928Z' => 'bra', 'BraA08t32236Z' => 'bra', 'BraA08t32841Z' => 'bra', 'BraA08t34524Z' => 'bra', 'BraA09t38742Z' => 'bra', 'BraA09t39295Z' => 'bra', 'C02p47180' => 'bna', 'C02p50990' => 'bna', 'C03p19360' => 'bna', 'C03p74950' => 'bna', 'C03p91000' => 'bna', 'C04p63260' => 'bna', 'C05p27050' => 'bna', 'C06p08750' => 'bna', 'C06p11490' => 'bna', 'C07p02820' => 'bna', 'C07p17180' => 'bna', 'C07p29440' => 'bna', 'C07p63730' => 'bna', 'C09p39260' => 'bna', 'CAN.G1164.34' => 'can', 'CAN.G1164.39' => 'can', 'CAN.G1530.3' => 'can', 'CAN.G162.61' => 'can', 'CAN.G176.6' => 'can', 'CAN.G289.49' => 'can', 'CAN.G370.21' => 'can', 'CAN.G370.22' => 'can', 'CAN.G371.117' => 'can', 'CAN.G58.37' => 'can', 'CAN.G588.98' => 'can', 'CANSAT21G2266' => 'cansat', 'CANSAT25G2799' => 'cansat', 'CANSAT35G0862' => 'cansat', 'CANSAT35G1704' => 'cansat', 'CANSAT35G1760' => 'cansat', 'CANSAT56G3971' => 'cansat', 'CANSAT56G4116' => 'cansat', 'CANSAT80G1259' => 'cansat', 'CARHR027730' => 'chi', 'CARHR033880' => 'chi', 'CARHR043270' => 'chi', 'CARHR145330' => 'chi', 'CARHR145340' => 'chi', 'CARHR175570' => 'chi', 'CARHR181570' => 'chi', 'CARHR258470' => 'chi', 'CARHR260490' => 'chi', 'CARHR294220' => 'chi', 'Carub.0001s2668' => 'cru', 'Carub.0001s3257' => 'cru', 'Carub.0001s4220' => 'cru', 'Carub.0005s0179' => 'cru', 'Carub.0006s2807' => 'cru', 'Carub.0007s0039' => 'cru', 'Carub.0008s0169' => 'cru', 'Carub.0008s0636' => 'cru', 'Ca_00338_v3' => 'car', 'Ca_00542_v3' => 'car', 'Ca_01844_v3' => 'car', 'Ca_10611_v3' => 'car', 'Ca_13326_v3' => 'car', 'Ca_17944_v3' => 'car', 'Ca_18546_v3' => 'car', 'Ca_24219_v3' => 'car', 'Ca_29972_v3' => 'car', 'CBR_g3681' => 'cbr', 'CBR_g40021' => 'cbr', 'Cc01_g08140' => 'ccan', 'Cc02_g13410' => 'ccan', 'Cc02_g37480' => 'ccan', 'Cc05_g12030' => 'ccan', 'Cc09_g03370' => 'ccan', 'Cc09_g10300' => 'ccan', 'Cc10_g03530' => 'ccan', 'Cc10_g11380' => 'ccan', 'CDE01G0176' => 'cde', 'CDE02G0675' => 'cde', 'CDE02G0942' => 'cde', 'CDE02G1153' => 'cde', 'CDE02G4177' => 'cde', 'CDE04G2117' => 'cde', 'CDE04G2736' => 'cde', 'CDE08G1161' => 'cde', 'CDE09G1238' => 'cde', 'Cfa000467' => 'cfa', 'Cfa000947' => 'cfa', 'Cfa004969' => 'cfa', 'Cfa005284' => 'cfa', 'Cfa008993' => 'cfa', 'Cfa018187' => 'cfa', 'Cfa018454' => 'cfa', 'Cfa020585' => 'cfa', 'Ciclev10000424m.g' => 'ccl', 'Ciclev10003605m.g' => 'ccl', 'Ciclev10007828m.g' => 'ccl', 'Ciclev10014620m.g' => 'ccl', 'Ciclev10015169m.g' => 'ccl', 'Ciclev10018291m.g' => 'ccl', 'Ciclev10028256m.g' => 'ccl', 'Ciclev10033822m.g' => 'ccl', 'CiPaw.05G060300' => 'cil', 'CiPaw.05G085000' => 'cil', 'CiPaw.06G083700' => 'cil', 'CiPaw.06G120300' => 'cil', 'CiPaw.09G060500' => 'cil', 'CiPaw.09G123800' => 'cil', 'CiPaw.11G169700' => 'cil', 'CiPaw.12G118300' => 'cil', 'CiPaw.15G071000' => 'cil', 'CiPaw.15G081900' => 'cil', 'ClCG01G024610' => 'cla', 'ClCG03G006070' => 'cla', 'ClCG05G019250' => 'cla', 'ClCG09G009500' => 'cla', 'ClCG11G008200' => 'cla', 'ClCG11G018080' => 'cla', 'COL.COLO4_17373' => 'col', 'COL.COLO4_22994' => 'col', 'COL.COLO4_26389' => 'col', 'COL.COLO4_27170' => 'col', 'COL.COLO4_31074' => 'col', 'COL.COLO4_31465' => 'col', 'COL.COLO4_36438' => 'col', 'COL.COLO4_36439' => 'col', 'Cpa.g.c38781' => 'cpa', 'Cpa.g.sc128.12' => 'cpa', 'Cpa.g.sc166.7' => 'cpa', 'Cpa.g.sc166.8' => 'cpa', 'Cpa.g.sc20.111' => 'cpa', 'Cpa.g.sc27.31' => 'cpa', 'Cpa.g.sc64.36' => 'cpa', 'Cpa.g.sc64.37' => 'cpa', 'Cpa.g.sc66.49' => 'cpa', 'Cpa.g.sc80.64' => 'cpa', 'CsaV3_1G012320' => 'csa', 'CsaV3_2G008480' => 'csa', 'CsaV3_2G033450' => 'csa', 'CsaV3_3G044830' => 'csa', 'CsaV3_4G033710' => 'csa', 'CsaV3_6G051730' => 'csa', 'CsaV3_7G025350' => 'csa', 'CSS0001067' => 'camsi', 'CSS0005996' => 'camsi', 'CSS0006590' => 'camsi', 'CSS0009673' => 'camsi', 'CSS0010201' => 'camsi', 'CSS0010549' => 'camsi', 'CSS0011364' => 'camsi', 'CSS0014473' => 'camsi', 'CSS0014961' => 'camsi', 'CSS0020191' => 'camsi', 'CSS0021165' => 'camsi', 'CSS0022306' => 'camsi', 'CSS0030591' => 'camsi', 'CSS0030696' => 'camsi', 'CSS0032653' => 'camsi', 'CSS0037487' => 'camsi', 'CSS0041102' => 'camsi', 'CSS0041261' => 'camsi', 'CSS0046246' => 'camsi', 'CSS0049256' => 'camsi', 'DCAR_004075' => 'dca', 'DCAR_011538' => 'dca', 'DCAR_019553' => 'dca', 'DCAR_020952' => 'dca', 'DCAR_021739' => 'dca', 'DCAR_027407' => 'dca', 'DCAR_027913' => 'dca', 'DCAR_028066' => 'dca', 'Dinv05899' => 'din', 'Dinv07563' => 'din', 'Dinv08010' => 'din', 'Dinv14125' => 'din', 'Dinv20172' => 'din', 'Dinv30743' => 'din', 'Dinv31229' => 'din', 'Dinv34162' => 'din', 'Dinv36028' => 'din', 'Dinv39368' => 'din', 'Dinv40565' => 'din', 'Dinv41706' => 'din', 'Duzib052G0089' => 'dzi', 'Duzib116G0641' => 'dzi', 'Duzib132G0069' => 'dzi', 'Duzib132G1219' => 'dzi', 'Duzib147G0278' => 'dzi', 'Duzib160G0480' => 'dzi', 'Duzib170G0661' => 'dzi', 'Duzib177G0591' => 'dzi', 'Duzib187G1353' => 'dzi', 'Duzib192G0858' => 'dzi', 'Duzib192G0883' => 'dzi', 'Duzib213G0506' => 'dzi', 'Duzib235G0289' => 'dzi', 'Duzib251G0422' => 'dzi', 'ECA232G3898' => 'eca', 'ECA233G5950' => 'eca', 'ECA234G1699' => 'eca', 'ECA234G2421' => 'eca', 'ECA236G0426' => 'eca', 'ECA236G4331' => 'eca', 'ECA248G2573' => 'eca', 'EL10Ac1g00077' => 'bvu', 'EL10Ac1g01746' => 'bvu', 'EL10Ac2g03464' => 'bvu', 'EL10Ac4g08176' => 'bvu', 'EL10Ac7g17521' => 'bvu', 'EL10Ac8g20386' => 'bvu', 'EL10Ac9g21343' => 'bvu', 'EL10Ac9g22688' => 'bvu', 'Eucgr.B03434' => 'egr', 'Eucgr.D00618' => 'egr', 'Eucgr.E02395' => 'egr', 'Eucgr.F01129' => 'egr', 'Eucgr.F02622' => 'egr', 'Eucgr.F04207' => 'egr', 'FAN01G0570' => 'fan', 'FAN03G3351' => 'fan', 'FAN06G3702' => 'fan', 'FAN07G2149' => 'fan', 'FAN10G3758' => 'fan', 'FAN11G1170' => 'fan', 'FAN11G2050' => 'fan', 'FAN11G2724' => 'fan', 'FAN12G1700' => 'fan', 'FAN12G2028' => 'fan', 'FAN15G1160' => 'fan', 'FAN15G3063' => 'fan', 'FAN16G2540' => 'fan', 'FAN16G3077' => 'fan', 'FAN16G3624' => 'fan', 'FAN17G0221' => 'fan', 'FAN20G2492' => 'fan', 'FAN20G2905' => 'fan', 'FAN21G0548' => 'fan', 'FAN21G1300' => 'fan', 'FAN22G0077' => 'fan', 'FAN22G1315' => 'fan', 'FAN24G1280' => 'fan', 'FAN24G1445' => 'fan', 'FAN24G3527' => 'fan', 'FAN25G0464' => 'fan', 'FAN25G2885' => 'fan', 'FAN25G3270' => 'fan', 'FAN27G1101' => 'fan', 'FAN27G2846' => 'fan', 'FAN27G3524' => 'fan', 'FvH4_2g11770' => 'fve', 'FvH4_2g15630' => 'fve', 'FvH4_3g05570' => 'fve', 'FvH4_3g09110' => 'fve', 'FvH4_3g19940' => 'fve', 'FvH4_4g04821' => 'fve', 'FvH4_4g31480' => 'fve', 'FvH4_7g01740' => 'fve', 'Glyma.05G130400' => 'gma', 'Glyma.05G156400' => 'gma', 'Glyma.07G197000' => 'gma', 'Glyma.08G085151' => 'gma', 'Glyma.08G114500' => 'gma', 'Glyma.08G300400' => 'gma', 'Glyma.10G215800' => 'gma', 'Glyma.12G224400' => 'gma', 'Glyma.13G179300' => 'gma', 'Glyma.13G218151' => 'gma', 'Glyma.13G238800' => 'gma', 'Glyma.13G276900' => 'gma', 'Glyma.14G078200' => 'gma', 'Glyma.15G074500' => 'gma', 'Glyma.15G094100' => 'gma', 'Glyma.17G247200' => 'gma', 'Glyma.18G120100' => 'gma', 'Glyma.20G176000' => 'gma', 'Gohir.A01G063600' => 'ghi', 'Gohir.A01G170301' => 'ghi', 'Gohir.A02G060500' => 'ghi', 'Gohir.A05G133850' => 'ghi', 'Gohir.A05G161400' => 'ghi', 'Gohir.A06G012900' => 'ghi', 'Gohir.A06G035901' => 'ghi', 'Gohir.A06G127100' => 'ghi', 'Gohir.A06G210500' => 'ghi', 'Gohir.A08G008650' => 'ghi', 'Gohir.A09G072700' => 'ghi', 'Gohir.A09G088301' => 'ghi', 'Gohir.A10G040600' => 'ghi', 'Gohir.A12G036300' => 'ghi', 'Gohir.A12G143350' => 'ghi', 'Gohir.A12G165500' => 'ghi', 'Gohir.A13G145700' => 'ghi', 'Gohir.D01G050000' => 'ghi', 'Gohir.D01G051366' => 'ghi', 'Gohir.D01G161350' => 'ghi', 'Gohir.D02G065900' => 'ghi', 'Gohir.D05G164200' => 'ghi', 'Gohir.D05G355500' => 'ghi', 'Gohir.D06G010400' => 'ghi', 'Gohir.D06G111250' => 'ghi', 'Gohir.D06G132000' => 'ghi', 'Gohir.D06G210500' => 'ghi', 'Gohir.D07G165675' => 'ghi', 'Gohir.D08G062240' => 'ghi', 'Gohir.D08G086101' => 'ghi', 'Gohir.D08G138060' => 'ghi', 'Gohir.D09G072300' => 'ghi', 'Gohir.D10G041400' => 'ghi', 'Gohir.D11G191020' => 'ghi', 'Gohir.D11G212066' => 'ghi', 'Gohir.D12G036300' => 'ghi', 'Gohir.D12G168600' => 'ghi', 'Gohir.D13G150600' => 'ghi', 'Gorai.001G057300' => 'gra', 'Gorai.002G069900' => 'gra', 'Gorai.002G200000' => 'gra', 'Gorai.003G067600' => 'gra', 'Gorai.005G074800' => 'gra', 'Gorai.006G087300' => 'gra', 'Gorai.008G037500' => 'gra', 'Gorai.008G181400' => 'gra', 'Gorai.009G169400' => 'gra', 'Gorai.009G387900' => 'gra', 'Gorai.010G013300' => 'gra', 'Gorai.010G153800' => 'gra', 'Gorai.010G255800' => 'gra', 'Gorai.011G043700' => 'gra', 'Gorai.011G198900' => 'gra', 'Gorai.013G168400' => 'gra', 'GSVIVG01005212001' => 'vvi', 'GSVIVG01006163001' => 'vvi', 'GSVIVG01009625001' => 'vvi', 'GSVIVG01014338001' => 'vvi', 'GSVIVG01020005001' => 'vvi', 'GSVIVG01021450001' => 'vvi', 'GSVIVG01023975001' => 'vvi', 'GSVIVG01034490001' => 'vvi', 'HanXRQChr04g0112071' => 'han', 'HanXRQChr05g0131151' => 'han', 'HanXRQChr09g0262371' => 'han', 'HanXRQChr09g0268401' => 'han', 'HanXRQChr10g0279241' => 'han', 'HanXRQChr10g0297961' => 'han', 'HanXRQChr11g0326231' => 'han', 'HanXRQChr11g0328471' => 'han', 'HanXRQChr16g0507941' => 'han', 'HanXRQChr17g0560211' => 'han', 'Haze_02108' => 'cav', 'Haze_02428' => 'cav', 'Haze_05593' => 'cav', 'Haze_06448' => 'cav', 'Haze_09427' => 'cav', 'Haze_12022' => 'cav', 'Haze_17612' => 'cav', 'Haze_17928' => 'cav', 'Hma1.2p1_0032F.1_g019250' => 'hma', 'Hma1.2p1_0163F.1_g072690' => 'hma', 'Hma1.2p1_0265F.1_g106710' => 'hma', 'Hma1.2p1_0286F.1_g113970' => 'hma', 'Hma1.2p1_0363F.1_g136640' => 'hma', 'Hma1.2p1_0584F.1_g183470' => 'hma', 'Hma1.2p1_0885F.1_g232570' => 'hma', 'HPP92_006022' => 'vpl', 'HPP92_007320' => 'vpl', 'HPP92_011521' => 'vpl', 'HPP92_019387' => 'vpl', 'HPP92_024038' => 'vpl', 'Hund05891' => 'sun', 'Hund06450' => 'sun', 'Hund12053' => 'sun', 'Hund16800' => 'sun', 'Hund21222' => 'sun', 'Hund22896' => 'sun', 'Hund23746' => 'sun', 'Hund27083' => 'sun', 'Lalb_Chr02g0141831' => 'lal', 'Lalb_Chr02g0141841' => 'lal', 'Lalb_Chr05g0220411' => 'lal', 'Lalb_Chr06g0162081' => 'lal', 'Lalb_Chr09g0327651' => 'lal', 'Lalb_Chr13g0295051' => 'lal', 'Lalb_Chr15g0086801' => 'lal', 'Lalb_Chr16g0383781' => 'lal', 'Lalb_Chr16g0383791' => 'lal', 'Lalb_Chr18g0055441' => 'lal', 'Lalb_Chr18g0059611' => 'lal', 'Lalb_Chr20g0109661' => 'lal', 'Lalb_Chr20g0109831' => 'lal', 'Lalb_Chr20g0121871' => 'lal', 'Lalb_Chr22g0355361' => 'lal', 'Lalb_Chr25g0286371' => 'lal', 'Lj1A1187G43' => 'lonja', 'Lj1A1205T50' => 'lonja', 'Lj1A800G33' => 'lonja', 'Lj1C1187T7' => 'lonja', 'Lj1C843T11' => 'lonja', 'Lj1g0010940' => 'lja', 'Lj2A288T69' => 'lonja', 'Lj3g0024276' => 'lja', 'Lj4A47T76' => 'lonja', 'Lj4g0005805' => 'lja', 'Lj4g0006097' => 'lja', 'Lj4g0008528' => 'lja', 'Lj4g0024907' => 'lja', 'Lj5g0012472' => 'lja', 'Lj5g0018648' => 'lja', 'Lj6C789G1' => 'lonja', 'Lj6g0004000' => 'lja', 'Lj7A292G67' => 'lonja', 'Lj7A292T64' => 'lonja', 'Lj9A400T58' => 'lonja', 'Lsat_1_v5_gn_1_126181' => 'lsa', 'Lsat_1_v5_gn_4_123041' => 'lsa', 'Lsat_1_v5_gn_4_133620' => 'lsa', 'Lsat_1_v5_gn_4_53221' => 'lsa', 'Lsat_1_v5_gn_4_71961' => 'lsa', 'Lsat_1_v5_gn_7_105241' => 'lsa', 'Lsat_1_v5_gn_7_21361' => 'lsa', 'Lsat_1_v5_gn_7_28860' => 'lsa', 'Lsat_1_v5_gn_7_31260' => 'lsa', 'Lsat_1_v5_gn_8_52801' => 'lsa', 'Manes.02G191400' => 'mes', 'Manes.03G110100' => 'mes', 'Manes.04G071100' => 'mes', 'Manes.05G100500' => 'mes', 'Manes.05G164700' => 'mes', 'Manes.15G087000' => 'mes', 'Manes.15G121500' => 'mes', 'Manes.16G028300' => 'mes', 'Manes.17G046100' => 'mes', 'Manes.17G069800' => 'mes', 'Manes.18G100500' => 'mes', 'Mapoly0002s0109' => 'mpo', 'Mapoly0024s0007' => 'mpo', 'Mapoly0089s0032' => 'mpo', 'MBI04_g42241_MAGBIO' => 'mbi', 'MBI05_g11988_MAGBIO' => 'mbi', 'MBI05_g35452_MAGBIO' => 'mbi', 'MBI07_g30179_MAGBIO' => 'mbi', 'MBI07_g35859_MAGBIO' => 'mbi', 'MBI07_g35860_MAGBIO' => 'mbi', 'MBI07_g37166_MAGBIO' => 'mbi', 'MBI08_g18172_MAGBIO' => 'mbi', 'MBI09_g08441_MAGBIO' => 'mbi', 'MBI13_g01676_MAGBIO' => 'mbi', 'MBI14_g42955_MAGBIO' => 'mbi', 'MBI16_g13161_MAGBIO' => 'mbi', 'MBI17_g27204_MAGBIO' => 'mbi', 'MBI19_g21595_MAGBIO' => 'mbi', 'MD00G1148400' => 'mdo', 'MD02G1301200' => 'mdo', 'MD03G1227800' => 'mdo', 'MD05G1041100' => 'mdo', 'MD05G1124800' => 'mdo', 'MD05G1284000' => 'mdo', 'MD05G1338800' => 'mdo', 'MD05G1338900' => 'mdo', 'MD07G1022800' => 'mdo', 'MD10G1047500' => 'mdo', 'MD10G1127500' => 'mdo', 'MD10G1262300' => 'mdo', 'MD10G1293800' => 'mdo', 'MD16G1074300' => 'mdo', 'Medtr1g021670' => 'mtr', 'Medtr1g096320' => 'mtr', 'Medtr2g013690' => 'mtr', 'Medtr2g019450' => 'mtr', 'Medtr2g085170' => 'mtr', 'Medtr4g088785' => 'mtr', 'Medtr8g055930' => 'mtr', 'Medtr8g085850' => 'mtr', 'MELO3C002605.2' => 'cme', 'MELO3C003891.2' => 'cme', 'MELO3C004012.2' => 'cme', 'MELO3C007134.2' => 'cme', 'MELO3C008118.2' => 'cme', 'MELO3C016700.2' => 'cme', 'MELO3C024127.2' => 'cme', 'MELO3C033361.2' => 'cme', 'MELO3C033362.2' => 'cme', 'Migut.C00430' => 'egut', 'Migut.C01246' => 'egut', 'Migut.E00101' => 'egut', 'Migut.H01486' => 'egut', 'Migut.H01939' => 'egut', 'Migut.K00360' => 'egut', 'Migut.M00910' => 'egut', 'Migut.M01139' => 'egut', 'Migut.N02677' => 'egut', 'MSTRG.13252' => 'ama', 'MSTRG.14701' => 'ama', 'MSTRG.1521' => 'ama', 'MSTRG.15884' => 'ama', 'MSTRG.16242' => 'ama', 'MSTRG.22285' => 'ama', 'MSTRG.22444' => 'ama', 'MSTRG.2349' => 'ama', 'MSTRG.26308' => 'ama', 'MSTRG.28296' => 'ama', 'MSTRG.9895' => 'ama', 'Nitab4.5_0000110g0060' => 'nta', 'Nitab4.5_0000420g0130' => 'nta', 'Nitab4.5_0000422g0030' => 'nta', 'Nitab4.5_0000560g0180' => 'nta', 'Nitab4.5_0000703g0100' => 'nta', 'Nitab4.5_0000786g0200' => 'nta', 'Nitab4.5_0001336g0020' => 'nta', 'Nitab4.5_0001796g0030' => 'nta', 'Nitab4.5_0003348g0060' => 'nta', 'Nitab4.5_0003698g0040' => 'nta', 'Nitab4.5_0003942g0090' => 'nta', 'Nitab4.5_0004775g0070' => 'nta', 'Nitab4.5_0004864g0030' => 'nta', 'Nitab4.5_0005615g0020' => 'nta', 'Nitab4.5_0009288g0030' => 'nta', 'Nitab4.5_0009341g0010' => 'nta', 'Nitab4.5_0009535g0010' => 'nta', 'Nn1g03995' => 'nnu', 'Nn1g04100' => 'nnu', 'Nn1g06530' => 'nnu', 'Nn3g16404' => 'nnu', 'Nn3g17212' => 'nnu', 'Nn3g20776' => 'nnu', 'Nn3g21923' => 'nnu', 'Nn5g27737' => 'nnu', 'Nn5g29461' => 'nnu', 'Nn7g38355' => 'nnu', 'Nn8g39873' => 'nnu', 'Oeu000548.2' => 'oeu', 'Oeu004672.1' => 'oeu', 'Oeu015605.2' => 'oeu', 'Oeu016092.1' => 'oeu', 'Oeu017879.3' => 'oeu', 'Oeu024910.1' => 'oeu', 'Oeu028965.1' => 'oeu', 'Oeu031269.1' => 'oeu', 'Oeu031270.1' => 'oeu', 'Oeu032535.1' => 'oeu', 'Oeu034151.1' => 'oeu', 'Oeu034152.1' => 'oeu', 'Oeu034588.2' => 'oeu', 'Oeu050846.1' => 'oeu', 'Oeu050849.2' => 'oeu', 'Oeu051063.2' => 'oeu', 'Oeu052368.1' => 'oeu', 'Oeu052370.1' => 'oeu', 'Os01g0210400' => 'osa', 'Os01g0304300' => 'osa', 'Os01g0749100' => 'osa', 'Os02g0745800' => 'osa', 'Os03g0769050' => 'osa', 'Os05g0531500' => 'osa', 'Os06g0724300' => 'osa', 'Os11g0198100' => 'osa', 'Peaxi162Scf00069g01425' => 'pax', 'Peaxi162Scf00280g00811' => 'pax', 'Peaxi162Scf00310g00615' => 'pax', 'Peaxi162Scf00362g00542' => 'pax', 'Peaxi162Scf00461g00310' => 'pax', 'Peaxi162Scf00530g00118' => 'pax', 'Peaxi162Scf00541g00057' => 'pax', 'Peaxi162Scf00661g00017' => 'pax', 'Peaxi162Scf00926g00027' => 'pax', 'Peaxi162Scf01064g00263' => 'pax', 'Peaxi162Scf01211g00135' => 'pax', 'PGR004G2336' => 'pgr', 'PGR042G0327' => 'pgr', 'PGR042G1957' => 'pgr', 'PGR042G2003' => 'pgr', 'PGR042G3929' => 'pgr', 'PGR083G1137' => 'pgr', 'PGR083G1364' => 'pgr', 'PGSC0003DMG400003381' => 'stu', 'PGSC0003DMG400003417' => 'stu', 'PGSC0003DMG400008981' => 'stu', 'PGSC0003DMG400012417' => 'stu', 'PGSC0003DMG400012823' => 'stu', 'PGSC0003DMG400016885' => 'stu', 'PGSC0003DMG400022812' => 'stu', 'PGSC0003DMG400029726' => 'stu', 'PGSC0003DMG401009243' => 'stu', 'PGSC0003DMG401031505' => 'stu', 'PGSC0003DMG402031505' => 'stu', 'Phvul.001G017600' => 'pvu', 'Phvul.002G193500' => 'pvu', 'Phvul.002G228900' => 'pvu', 'Phvul.002G236800' => 'pvu', 'Phvul.003G049500' => 'pvu', 'Phvul.005G072000' => 'pvu', 'Phvul.006G164800' => 'pvu', 'Phvul.006G185100' => 'pvu', 'Phvul.007G090000' => 'pvu', 'Potri.001G399800' => 'ptr', 'Potri.002G149900' => 'ptr', 'Potri.004G044100' => 'ptr', 'Potri.004G177600' => 'ptr', 'Potri.009G138000' => 'ptr', 'Potri.010G094000' => 'ptr', 'Potri.011G053000' => 'ptr', 'Potri.011G119300' => 'ptr', 'Potri.013G113700' => 'ptr', 'Potri.018G107800' => 'ptr', 'Potri.019G084100' => 'ptr', 'Pp3c14_23720' => 'ppa', 'Pp3c16_6340' => 'ppa', 'Pp3c23_13420' => 'ppa', 'Pp3c24_2740' => 'ppa', 'Pp3c25_860' => 'ppa', 'Pp3c8_21750' => 'ppa', 'Prupe.1G273000' => 'ppe', 'Prupe.1G273700' => 'ppe', 'Prupe.1G274100' => 'ppe', 'Prupe.2G023300' => 'ppe', 'Prupe.4G048000' => 'ppe', 'Prupe.4G080400' => 'ppe', 'Prupe.4G181200' => 'ppe', 'Prupe.8G056900' => 'ppe', 'Prupe.8G168700' => 'ppe', 'Psat1g189080' => 'psa', 'Psat1g204760' => 'psa', 'Psat4g175560' => 'psa', 'Psat4g177720' => 'psa', 'Psat5g244240' => 'psa', 'Psat6g010720' => 'psa', 'Psat6g187200' => 'psa', 'Psat7g072040' => 'psa', 'PSO017G3501' => 'pso', 'PSO063G2148' => 'pso', 'PSO063G5608' => 'pso', 'PSO210G6392' => 'pso', 'PSO541G2319' => 'pso', 'PSO541G2836' => 'pso', 'PSO541G4012' => 'pso', 'PSO541G6253' => 'pso', 'PSO675G0580' => 'pso', 'PSO675G0856' => 'pso', 'PSO675G5635' => 'pso', 'PSO675G9157' => 'pso', 'PSO832G1660' => 'pso', 'PSO832G1969' => 'pso', 'QL02p007186' => 'qlo', 'QL02p033904' => 'qlo', 'QL03p064391' => 'qlo', 'QL05p040593' => 'qlo', 'QL05p058242' => 'qlo', 'QL08p021825' => 'qlo', 'QL11p004981' => 'qlo', 'RcHm_v2.0_Chr1g0318301' => 'rch', 'RcHm_v2.0_Chr4g0418501' => 'rch', 'RcHm_v2.0_Chr4g0439971' => 'rch', 'RcHm_v2.0_Chr5g0008541' => 'rch', 'RcHm_v2.0_Chr5g0014101' => 'rch', 'RcHm_v2.0_Chr5g0014131' => 'rch', 'RcHm_v2.0_Chr5g0033621' => 'rch', 'RcHm_v2.0_Chr6g0272041' => 'rch', 'RcHm_v2.0_Chr6g0278831' => 'rch', 'Rhsim02G0130400' => 'rsi', 'Rhsim02G0171100' => 'rsi', 'Rhsim05G0053000' => 'rsi', 'Rhsim05G0053100' => 'rsi', 'Rhsim06G0096500' => 'rsi', 'Rhsim06G0096600' => 'rsi', 'Rhsim06G0199100' => 'rsi', 'Rhsim12G0062300' => 'rsi', 'Rhsim12G0062800' => 'rsi', 'Sabra02G0118600' => 'sbr', 'Sabra04G0027300' => 'sbr', 'Sabra04G0119500' => 'sbr', 'Sabra08G0112500' => 'sbr', 'Sabra11G0036800' => 'sbr', 'Sabra11G0103800' => 'sbr', 'Sabra13G0096300' => 'sbr', 'Sabra16G0262300' => 'sbr', 'Sabra18G0091700' => 'sbr', 'Sabra19G0095400' => 'sbr', 'SalBow6G3080' => 'sbo', 'SalBow7G1157' => 'sbo', 'SalBow7G2123' => 'sbo', 'SalBow7G2285' => 'sbo', 'SalBow7G3537' => 'sbo', 'SalBow8G2947' => 'sbo', 'SalBow8G4463' => 'sbo', 'SalBow8G5466' => 'sbo', 'Sc01g0001750' => 'sci', 'Sc02g0006640' => 'sci', 'Sc02g0006670' => 'sci', 'Sc04g0008220' => 'sci', 'Sc05g0006190' => 'sci', 'Sc08g0002760' => 'sci', 'Sc17g0006170' => 'sci', 'Sc22g0002050' => 'sci', 'Sc23g0001190' => 'sci', 'Sc24g0000980' => 'sci', 'Sed0006245' => 'sed', 'Sed0007543' => 'sed', 'Sed0009411' => 'sed', 'Sed0010765' => 'sed', 'Sed0012944' => 'sed', 'Sed0014682' => 'sed', 'Sed0016174' => 'sed', 'Sed0016796' => 'sed', 'Sed0020317' => 'sed', 'Sed0021467' => 'sed', 'SEGI_01316' => 'sgi', 'SEGI_03374' => 'sgi', 'SEGI_16265' => 'sgi', 'SEGI_18569' => 'sgi', 'SEGI_20351' => 'sgi', 'SEGI_26395' => 'sgi', 'SEGI_29469' => 'sgi', 'SEGI_34771' => 'sgi', 'SEGI_36769' => 'sgi', 'SEGI_37139' => 'sgi', 'SGA_v2.0_scaffold100G29687' => 'sas', 'SGA_v2.0_scaffold118G32472' => 'sas', 'SGA_v2.0_scaffold14G07051' => 'sas', 'SGA_v2.0_scaffold183G39845' => 'sas', 'SGA_v2.0_scaffold1G00174' => 'sas', 'SGA_v2.0_scaffold22G09714' => 'sas', 'SGA_v2.0_scaffold333G48992' => 'sas', 'SGA_v2.0_scaffold46G17491' => 'sas', 'SGA_v2.0_scaffold49G18294' => 'sas', 'SGA_v2.0_scaffold63G21658' => 'sas', 'SHI01741' => 'shi', 'SHI05771' => 'shi', 'SHI18077' => 'shi', 'SHI20525' => 'shi', 'SHI20527' => 'shi', 'SHI20528' => 'shi', 'SMO172G0185' => 'smo', 'SMO198G0020' => 'smo', 'SMO351G0006' => 'smo', 'SMO356G0118' => 'smo', 'SMO358G0296' => 'smo', 'SMO367G0079' => 'smo', 'SMO367G1277' => 'smo', 'Solyc01g014220.3' => 'sly', 'Solyc01g111770.2' => 'sly', 'Solyc02g078180.3' => 'sly', 'Solyc03g006430.3' => 'sly', 'Solyc03g006456.1' => 'sly', 'Solyc03g079860.2' => 'sly', 'Solyc04g079770.3' => 'sly', 'Solyc05g007430.4' => 'sly', 'Solyc07g063150.3' => 'sly', 'Solyc08g016620.3' => 'sly', 'Solyc09g057590.3' => 'sly', 'Solyc09g057600.1' => 'sly', 'Solyc10g009050.3' => 'sly', 'Solyc11g017420.2' => 'sly', 'Sopen01g053810' => 'spe', 'Sopen02g023040' => 'spe', 'Sopen03g002440' => 'spe', 'Sopen04g033350' => 'spe', 'Sopen05g003310' => 'spe', 'Sopen07g004050' => 'spe', 'Sopen07g031340' => 'spe', 'Sopen08g006990' => 'spe', 'Sopen10g004830' => 'spe', 'Sopen11g009370' => 'spe', 'Sp1g24450' => 'spa', 'Sp1g29670' => 'spa', 'Sp1g39600' => 'spa', 'Sp2g11080' => 'spa', 'Sp2g13970' => 'spa', 'Sp4g16130' => 'spa', 'Sp6g13080' => 'spa', 'Sp7g37270' => 'spa', 'TAR371G0065' => 'tar', 'TAR376G0340' => 'tar', 'TAR376G0435' => 'tar', 'TAR381G0002' => 'tar', 'TAR381G1236' => 'tar', 'TAR624G0055' => 'tar', 'TAR624G0324' => 'tar', 'TAR624G0696' => 'tar', 'TAR624G0906' => 'tar', 'TAR625G0107' => 'tar', 'TAR626G0015' => 'tar', 'TAR626G1356' => 'tar', 'TAR627G0888' => 'tar', 'TAR628G0399' => 'tar', 'TAR628G1327' => 'tar', 'TAR629G2831' => 'tar', 'TAR629G2874' => 'tar', 'TAR633G1432' => 'tar', 'TAR633G2771' => 'tar', 'THA.LOC104803394' => 'tha', 'THA.LOC104805153' => 'tha', 'THA.LOC104806784' => 'tha', 'THA.LOC104810473' => 'tha', 'THA.LOC104813100' => 'tha', 'THA.LOC104814215' => 'tha', 'THA.LOC104815554' => 'tha', 'THA.LOC104820544' => 'tha', 'THA.LOC104824754' => 'tha', 'THA.LOC104827717' => 'tha', 'Thecc.02G031400' => 'tca', 'Thecc.02G055900' => 'tca', 'Thecc.02G350800' => 'tca', 'Thecc.06G150900' => 'tca', 'Thecc.06G186600' => 'tca', 'Thecc.07G089600' => 'tca', 'Thecc.08G020400' => 'tca', 'Thecc.08G182100' => 'tca', 'Thhalv10000873m.g' => 'esa', 'Thhalv10004185m.g' => 'esa', 'Thhalv10006981m.g' => 'esa', 'Thhalv10007204m.g' => 'esa', 'Thhalv10011374m.g' => 'esa', 'Thhalv10013482m.g' => 'esa', 'Thhalv10017801m.g' => 'esa', 'Thhalv10024983m.g' => 'esa', 'TPR.G12072' => 'tpr', 'TPR.G15769' => 'tpr', 'TPR.G16504' => 'tpr', 'TPR.G16506' => 'tpr', 'TPR.G24345' => 'tpr', 'TPR.G26666' => 'tpr', 'TPR.G27320' => 'tpr', 'TPR.G31819' => 'tpr', 'TPR.G38879' => 'tpr', 'TPR.G39015' => 'tpr', 'TPR.G8819' => 'tpr', 'TWI09G0924' => 'twi', 'TWI12G0811' => 'twi', 'TWI12G1294' => 'twi', 'TWI31G0150' => 'twi', 'TWI36G1262' => 'twi', 'TWI38G1287' => 'twi', 'TWI38G1633' => 'twi', 'TWI38G1982' => 'twi', 'TWI39G0116' => 'twi', 'TWI60G1011' => 'twi', 'TWI63G0171' => 'twi', 'TWI73G0839' => 'twi', 'TWI79G1511' => 'twi', 'unitig_0.g915' => 'ugi', 'unitig_0.g916' => 'ugi', 'unitig_21.g20219' => 'ugi', 'unitig_21.g20416' => 'ugi', 'unitig_578.g16132' => 'ugi', 'unitig_578.g16718' => 'ugi', 'unitig_62.g23481' => 'ugi', 'unitig_744.g24535' => 'ugi', 'unitig_749.g13525' => 'ugi', 'vmacro01248' => 'vma', 'vmacro02290' => 'vma', 'vmacro10946' => 'vma', 'vmacro11865' => 'vma', 'vmacro12493' => 'vma', 'vmacro17322' => 'vma', 'vmacro21599' => 'vma', 'vmacro23041' => 'vma', 'VMungo0251G0004' => 'vmu', 'VMungo0251G2639' => 'vmu', 'VMungo0251G2967' => 'vmu', 'VMungo0540G0864' => 'vmu', 'VMungo0540G1569' => 'vmu', 'VMungo0647G0317' => 'vmu', 'VMungo0720G1373' => 'vmu', 'VMungo0720G1508' => 'vmu', 'VMungo1080G0485' => 'vmu', 'VMungo1215G3177' => 'vmu', 'Zm00001eb112600' => 'zma', 'Zm00001eb120220' => 'zma', 'Zm00001eb153240' => 'zma', 'Zm00001eb168880' => 'zma', 'Zm00001eb213920' => 'zma', 'Zm00001eb228280' => 'zma', 'Zm00001eb254580' => 'zma', 'Zm00001eb272180' => 'zma', 'Zm00001eb293190' => 'zma', 'Zm00001eb322930' => 'zma', 'Zm00001eb353360' => 'zma', 'Zm00001eb353390' => 'zma', 'Zm00001eb353430' => 'zma', 'Zm00001eb353440' => 'zma', 'Zm00001eb353780' => 'zma' ) $gf_id = 'HOM05D000499' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000499' ) $data_identifier = 'HOM05D000499' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 29, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 12, 'amhyb' => (int) 8, 'aly' => (int) 12, 'aox' => (int) 9, 'arhy' => (int) 26, 'ath' => (int) 8, 'atr' => (int) 7, 'acertr' => (int) 10, 'cqu' => (int) 15, 'bca' => (int) 29, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 11, 'cansat' => (int) 8, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 9, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 8, 'cpa' => (int) 10, 'csa' => (int) 7, 'camsi' => (int) 20, 'dca' => (int) 8, 'din' => (int) 12, 'dzi' => (int) 14, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 6, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 38, 'gra' => (int) 16, 'vvi' => (int) 8, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 5, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 11, 'lja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 11, 'mpo' => (int) 3, 'mbi' => (int) 14, 'mdo' => (int) 14, 'mtr' => (int) 8, 'cme' => (int) 9, 'egut' => (int) 9, 'ama' => (int) 11, 'nta' => (int) 17, 'nnu' => (int) 11, 'oeu' => (int) 18, 'osa' => (int) 8, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 6, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 9, 'rsi' => (int) 9, 'sbr' => (int) 10, 'sbo' => (int) 8, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 10, 'sas' => (int) 10, 'shi' => (int) 6, 'smo' => (int) 7, 'sly' => (int) 14, 'spe' => (int) 10, 'spa' => (int) 8, 'tar' => (int) 19, 'tha' => (int) 10, 'tca' => (int) 8, 'esa' => (int) 8, 'tpr' => (int) 11, 'twi' => (int) 13, 'ugi' => (int) 9, 'vma' => (int) 8, 'vmu' => (int) 10, 'zma' => (int) 15 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb353780' $species_info = array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ) $local_species = 'spa' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000499', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1066', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p29780' => 'bna', 'A02p33180' => 'bna', 'A03p16470' => 'bna', 'A03p66010' => 'bna', 'A04p25970' => 'bna', 'A06p01270' => 'bna', 'A06p46080' => 'bna', 'A07p11400' => 'bna', 'A08p01840' => 'bna', 'A08p08230' => 'bna', 'A08p25740' => 'bna', 'A09p32070' => 'bna', 'A09p37830' => 'bna', 'A09p42840' => 'bna', 'A09p42850' => 'bna', 'Aa31LG10G2060' => 'aar', 'Aa31LG2G7410' => 'aar', 'Aa31LG6G10200' => 'aar', 'Aa31LG6G16680' => 'aar', 'Aa31LG6G8470' => 'aar', 'Aa31LG9G12730' => 'aar', 'Aa31LG9G13680' => 'aar', 'Aa31LG9G14920' => 'aar', 'Aa31LG9G6650' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4977' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5467' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3254' => 'aag', 'Actinidia02578' => 'ach', 'Actinidia07693' => 'ach', 'Actinidia08413' => 'ach', 'Actinidia08414' => 'ach', 'Actinidia15289' => 'ach', 'Actinidia19871' => 'ach', 'Actinidia21475' => 'ach', 'Actinidia22576' => 'ach', 'Actinidia28327' => 'ach', 'Actinidia32491' => 'ach', 'Actinidia39463' => 'ach', 'Actinidia39571' => 'ach', 'Ah.01g013750' => 'amhyb', 'Ah.01g023210' => 'amhyb', 'Ah.04g164850' => 'amhyb', 'Ah.05g178060' => 'amhyb', 'Ah.07g204270' => 'amhyb', 'Ah.07g208480' => 'amhyb', 'Ah.09g237410' => 'amhyb', 'Ah.14g089460' => 'amhyb', 'AL1G41790' => 'aly', 'AL1G49050' => 'aly', 'AL1G53810' => 'aly', 'AL1G61400' => 'aly', 'AL4G18580' => 'aly', 'AL5G12510' => 'aly', 'AL5G12540' => 'aly', 'AL6G43230' => 'aly', 'AL7G10370' => 'aly', 'AL7G19250' => 'aly', 'AL8G12240' => 'aly', 'AL8G18540' => 'aly', 'Aqoxy1G02409' => 'aox', 'Aqoxy2G03993' => 'aox', 'Aqoxy3G03357' => 'aox', 'Aqoxy4G00785' => 'aox', 'Aqoxy5G02598' => 'aox', 'Aqoxy6G00132' => 'aox', 'Aqoxy7G01776' => 'aox', 'Aqoxy7G02316' => 'aox', 'Aqoxy7G03973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.12AFKW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B8730' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27IQR1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3F75VG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3RE0GA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41TCQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.527VTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FIR39' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5W8UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DA38EV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ63HS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H1I32C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HC27T5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4M8AP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7N3CZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9UVDZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LS1NQA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT1D4B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SKC4TM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCFV76' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF9Q1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQWD9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1ZM88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WE07RT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YCK7VH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJE6Q6' => 'arhy', 'AT1G28240' => 'ath', 'AT1G34550' => 'ath', 'AT1G53040' => 'ath', 'AT2G02910' => 'ath', 'AT4G09630' => 'ath', 'AT4G38500' => 'ath', 'AT5G42660' => 'ath', 'AT5G46220' => 'ath', 'ATR0152G026' => 'atr', 'ATR0564G343' => 'atr', 'ATR0706G151' => 'atr', 'ATR0733G207' => 'atr', 'ATR0751G234' => 'atr', 'ATR0807G048' => 'atr', 'ATR1091G084' => 'atr', 'Atru.chr10.1229' => 'acertr', 'Atru.chr10.1230' => 'acertr', 'Atru.chr10.1874' => 'acertr', 'Atru.chr11.1808' => 'acertr', 'Atru.chr13.1795' => 'acertr', 'Atru.chr13.570' => 'acertr', 'Atru.chr2.2608' => 'acertr', 'Atru.chr2.2609' => 'acertr', 'Atru.chr5.3428' => 'acertr', 'Atru.chr8.1171' => 'acertr', 'AUR62004651' => 'cqu', 'AUR62008675' => 'cqu', 'AUR62010014' => 'cqu', 'AUR62013004' => 'cqu', 'AUR62014825' => 'cqu', 'AUR62015015' => 'cqu', 'AUR62015151' => 'cqu', 'AUR62017020' => 'cqu', 'AUR62019422' => 'cqu', 'AUR62023570' => 'cqu', 'AUR62025571' => 'cqu', 'AUR62029098' => 'cqu', 'AUR62033863' => 'cqu', 'AUR62034296' => 'cqu', 'AUR62040075' => 'cqu', 'BcaB02g07334' => 'bca', 'BcaB02g10575' => 'bca', 'BcaB03g12119' => 'bca', 'BcaB03g12120' => 'bca', 'BcaB03g13945' => 'bca', 'BcaB04g17123' => 'bca', 'BcaB04g17867' => 'bca', 'BcaB04g19839' => 'bca', 'BcaB07g30317' => 'bca', 'BcaB07g32432' => 'bca', 'BcaB07g33362' => 'bca', 'BcaB08g36611' => 'bca', 'BcaC01g00028' => 'bca', 'BcaC01g01356' => 'bca', 'BcaC01g02034' => 'bca', 'BcaC01g06051' => 'bca', 'BcaC03g16839' => 'bca', 'BcaC03g17176' => 'bca', 'BcaC05g26829' => 'bca', 'BcaC06g31490' => 'bca', 'BcaC06g35344' => 'bca', 'BcaC06g36570' => 'bca', 'BcaC07g37537' => 'bca', 'BcaC08g43491' => 'bca', 'BcaC08g43773' => 'bca', 'BcaNung00234' => 'bca', 'BcaNung01982' => 'bca', 'BcaNung03707' => 'bca', 'BcaNung06454' => 'bca', 'BolC2t10762H' => 'bol', 'BolC2t11191H' => 'bol', 'BolC3t14322H' => 'bol', 'BolC3t19747H' => 'bol', 'BolC3t21425H' => 'bol', 'BolC4t27800H' => 'bol', 'BolC5t31423H' => 'bol', 'BolC6t35951H' => 'bol', 'BolC6t36282H' => 'bol', 'BolC7t40678H' => 'bol', 'BolC7t40679H' => 'bol', 'BolC7t42222H' => 'bol', 'BolC7t43492H' => 'bol', 'BolC7t46785H' => 'bol', 'BolC8t47853H' => 'bol', 'BolC9t56805H' => 'bol', 'BraA02t08000Z' => 'bra', 'BraA02t08341Z' => 'bra', 'BraA03t10936Z' => 'bra', 'BraA03t15657Z' => 'bra', 'BraA04t18100Z' => 'bra', 'BraA05t20523Z' => 'bra', 'BraA06t23353Z' => 'bra', 'BraA06t27473Z' => 'bra', 'BraA06t27769Z' => 'bra', 'BraA07t28928Z' => 'bra', 'BraA08t32236Z' => 'bra', 'BraA08t32841Z' => 'bra', 'BraA08t34524Z' => 'bra', 'BraA09t38742Z' => 'bra', 'BraA09t39295Z' => 'bra', 'C02p47180' => 'bna', 'C02p50990' => 'bna', 'C03p19360' => 'bna', 'C03p74950' => 'bna', 'C03p91000' => 'bna', 'C04p63260' => 'bna', 'C05p27050' => 'bna', 'C06p08750' => 'bna', 'C06p11490' => 'bna', 'C07p02820' => 'bna', 'C07p17180' => 'bna', 'C07p29440' => 'bna', 'C07p63730' => 'bna', 'C09p39260' => 'bna', 'CAN.G1164.34' => 'can', 'CAN.G1164.39' => 'can', 'CAN.G1530.3' => 'can', 'CAN.G162.61' => 'can', 'CAN.G176.6' => 'can', 'CAN.G289.49' => 'can', 'CAN.G370.21' => 'can', 'CAN.G370.22' => 'can', 'CAN.G371.117' => 'can', 'CAN.G58.37' => 'can', 'CAN.G588.98' => 'can', 'CANSAT21G2266' => 'cansat', 'CANSAT25G2799' => 'cansat', 'CANSAT35G0862' => 'cansat', 'CANSAT35G1704' => 'cansat', 'CANSAT35G1760' => 'cansat', 'CANSAT56G3971' => 'cansat', 'CANSAT56G4116' => 'cansat', 'CANSAT80G1259' => 'cansat', 'CARHR027730' => 'chi', 'CARHR033880' => 'chi', 'CARHR043270' => 'chi', 'CARHR145330' => 'chi', 'CARHR145340' => 'chi', 'CARHR175570' => 'chi', 'CARHR181570' => 'chi', 'CARHR258470' => 'chi', 'CARHR260490' => 'chi', 'CARHR294220' => 'chi', 'Carub.0001s2668' => 'cru', 'Carub.0001s3257' => 'cru', 'Carub.0001s4220' => 'cru', 'Carub.0005s0179' => 'cru', 'Carub.0006s2807' => 'cru', 'Carub.0007s0039' => 'cru', 'Carub.0008s0169' => 'cru', 'Carub.0008s0636' => 'cru', 'Ca_00338_v3' => 'car', 'Ca_00542_v3' => 'car', 'Ca_01844_v3' => 'car', 'Ca_10611_v3' => 'car', 'Ca_13326_v3' => 'car', 'Ca_17944_v3' => 'car', 'Ca_18546_v3' => 'car', 'Ca_24219_v3' => 'car', 'Ca_29972_v3' => 'car', 'CBR_g3681' => 'cbr', 'CBR_g40021' => 'cbr', 'Cc01_g08140' => 'ccan', 'Cc02_g13410' => 'ccan', 'Cc02_g37480' => 'ccan', 'Cc05_g12030' => 'ccan', 'Cc09_g03370' => 'ccan', 'Cc09_g10300' => 'ccan', 'Cc10_g03530' => 'ccan', 'Cc10_g11380' => 'ccan', 'CDE01G0176' => 'cde', 'CDE02G0675' => 'cde', 'CDE02G0942' => 'cde', 'CDE02G1153' => 'cde', 'CDE02G4177' => 'cde', 'CDE04G2117' => 'cde', 'CDE04G2736' => 'cde', 'CDE08G1161' => 'cde', 'CDE09G1238' => 'cde', 'Cfa000467' => 'cfa', 'Cfa000947' => 'cfa', 'Cfa004969' => 'cfa', 'Cfa005284' => 'cfa', 'Cfa008993' => 'cfa', 'Cfa018187' => 'cfa', 'Cfa018454' => 'cfa', 'Cfa020585' => 'cfa', 'Ciclev10000424m.g' => 'ccl', 'Ciclev10003605m.g' => 'ccl', 'Ciclev10007828m.g' => 'ccl', 'Ciclev10014620m.g' => 'ccl', 'Ciclev10015169m.g' => 'ccl', 'Ciclev10018291m.g' => 'ccl', 'Ciclev10028256m.g' => 'ccl', 'Ciclev10033822m.g' => 'ccl', 'CiPaw.05G060300' => 'cil', 'CiPaw.05G085000' => 'cil', 'CiPaw.06G083700' => 'cil', 'CiPaw.06G120300' => 'cil', 'CiPaw.09G060500' => 'cil', 'CiPaw.09G123800' => 'cil', 'CiPaw.11G169700' => 'cil', 'CiPaw.12G118300' => 'cil', 'CiPaw.15G071000' => 'cil', 'CiPaw.15G081900' => 'cil', 'ClCG01G024610' => 'cla', 'ClCG03G006070' => 'cla', 'ClCG05G019250' => 'cla', 'ClCG09G009500' => 'cla', 'ClCG11G008200' => 'cla', 'ClCG11G018080' => 'cla', 'COL.COLO4_17373' => 'col', 'COL.COLO4_22994' => 'col', 'COL.COLO4_26389' => 'col', 'COL.COLO4_27170' => 'col', 'COL.COLO4_31074' => 'col', 'COL.COLO4_31465' => 'col', 'COL.COLO4_36438' => 'col', 'COL.COLO4_36439' => 'col', 'Cpa.g.c38781' => 'cpa', 'Cpa.g.sc128.12' => 'cpa', 'Cpa.g.sc166.7' => 'cpa', 'Cpa.g.sc166.8' => 'cpa', 'Cpa.g.sc20.111' => 'cpa', 'Cpa.g.sc27.31' => 'cpa', 'Cpa.g.sc64.36' => 'cpa', 'Cpa.g.sc64.37' => 'cpa', 'Cpa.g.sc66.49' => 'cpa', 'Cpa.g.sc80.64' => 'cpa', 'CsaV3_1G012320' => 'csa', 'CsaV3_2G008480' => 'csa', 'CsaV3_2G033450' => 'csa', 'CsaV3_3G044830' => 'csa', 'CsaV3_4G033710' => 'csa', 'CsaV3_6G051730' => 'csa', 'CsaV3_7G025350' => 'csa', 'CSS0001067' => 'camsi', 'CSS0005996' => 'camsi', 'CSS0006590' => 'camsi', 'CSS0009673' => 'camsi', 'CSS0010201' => 'camsi', 'CSS0010549' => 'camsi', 'CSS0011364' => 'camsi', 'CSS0014473' => 'camsi', 'CSS0014961' => 'camsi', 'CSS0020191' => 'camsi', 'CSS0021165' => 'camsi', 'CSS0022306' => 'camsi', 'CSS0030591' => 'camsi', 'CSS0030696' => 'camsi', 'CSS0032653' => 'camsi', 'CSS0037487' => 'camsi', 'CSS0041102' => 'camsi', 'CSS0041261' => 'camsi', 'CSS0046246' => 'camsi', 'CSS0049256' => 'camsi', 'DCAR_004075' => 'dca', 'DCAR_011538' => 'dca', 'DCAR_019553' => 'dca', 'DCAR_020952' => 'dca', 'DCAR_021739' => 'dca', 'DCAR_027407' => 'dca', 'DCAR_027913' => 'dca', 'DCAR_028066' => 'dca', 'Dinv05899' => 'din', 'Dinv07563' => 'din', 'Dinv08010' => 'din', 'Dinv14125' => 'din', 'Dinv20172' => 'din', 'Dinv30743' => 'din', 'Dinv31229' => 'din', 'Dinv34162' => 'din', 'Dinv36028' => 'din', 'Dinv39368' => 'din', 'Dinv40565' => 'din', 'Dinv41706' => 'din', 'Duzib052G0089' => 'dzi', 'Duzib116G0641' => 'dzi', 'Duzib132G0069' => 'dzi', 'Duzib132G1219' => 'dzi', 'Duzib147G0278' => 'dzi', 'Duzib160G0480' => 'dzi', 'Duzib170G0661' => 'dzi', 'Duzib177G0591' => 'dzi', 'Duzib187G1353' => 'dzi', 'Duzib192G0858' => 'dzi', 'Duzib192G0883' => 'dzi', 'Duzib213G0506' => 'dzi', 'Duzib235G0289' => 'dzi', 'Duzib251G0422' => 'dzi', 'ECA232G3898' => 'eca', 'ECA233G5950' => 'eca', 'ECA234G1699' => 'eca', 'ECA234G2421' => 'eca', 'ECA236G0426' => 'eca', 'ECA236G4331' => 'eca', 'ECA248G2573' => 'eca', 'EL10Ac1g00077' => 'bvu', 'EL10Ac1g01746' => 'bvu', 'EL10Ac2g03464' => 'bvu', 'EL10Ac4g08176' => 'bvu', 'EL10Ac7g17521' => 'bvu', 'EL10Ac8g20386' => 'bvu', 'EL10Ac9g21343' => 'bvu', 'EL10Ac9g22688' => 'bvu', 'Eucgr.B03434' => 'egr', 'Eucgr.D00618' => 'egr', 'Eucgr.E02395' => 'egr', 'Eucgr.F01129' => 'egr', 'Eucgr.F02622' => 'egr', 'Eucgr.F04207' => 'egr', 'FAN01G0570' => 'fan', 'FAN03G3351' => 'fan', 'FAN06G3702' => 'fan', 'FAN07G2149' => 'fan', 'FAN10G3758' => 'fan', 'FAN11G1170' => 'fan', 'FAN11G2050' => 'fan', 'FAN11G2724' => 'fan', 'FAN12G1700' => 'fan', 'FAN12G2028' => 'fan', 'FAN15G1160' => 'fan', 'FAN15G3063' => 'fan', 'FAN16G2540' => 'fan', 'FAN16G3077' => 'fan', 'FAN16G3624' => 'fan', 'FAN17G0221' => 'fan', 'FAN20G2492' => 'fan', 'FAN20G2905' => 'fan', 'FAN21G0548' => 'fan', 'FAN21G1300' => 'fan', 'FAN22G0077' => 'fan', 'FAN22G1315' => 'fan', 'FAN24G1280' => 'fan', 'FAN24G1445' => 'fan', 'FAN24G3527' => 'fan', 'FAN25G0464' => 'fan', 'FAN25G2885' => 'fan', 'FAN25G3270' => 'fan', 'FAN27G1101' => 'fan', 'FAN27G2846' => 'fan', 'FAN27G3524' => 'fan', 'FvH4_2g11770' => 'fve', 'FvH4_2g15630' => 'fve', 'FvH4_3g05570' => 'fve', 'FvH4_3g09110' => 'fve', 'FvH4_3g19940' => 'fve', 'FvH4_4g04821' => 'fve', 'FvH4_4g31480' => 'fve', 'FvH4_7g01740' => 'fve', 'Glyma.05G130400' => 'gma', 'Glyma.05G156400' => 'gma', 'Glyma.07G197000' => 'gma', 'Glyma.08G085151' => 'gma', 'Glyma.08G114500' => 'gma', 'Glyma.08G300400' => 'gma', 'Glyma.10G215800' => 'gma', 'Glyma.12G224400' => 'gma', 'Glyma.13G179300' => 'gma', 'Glyma.13G218151' => 'gma', 'Glyma.13G238800' => 'gma', 'Glyma.13G276900' => 'gma', 'Glyma.14G078200' => 'gma', 'Glyma.15G074500' => 'gma', 'Glyma.15G094100' => 'gma', 'Glyma.17G247200' => 'gma', 'Glyma.18G120100' => 'gma', 'Glyma.20G176000' => 'gma', 'Gohir.A01G063600' => 'ghi', 'Gohir.A01G170301' => 'ghi', 'Gohir.A02G060500' => 'ghi', 'Gohir.A05G133850' => 'ghi', 'Gohir.A05G161400' => 'ghi', 'Gohir.A06G012900' => 'ghi', 'Gohir.A06G035901' => 'ghi', 'Gohir.A06G127100' => 'ghi', 'Gohir.A06G210500' => 'ghi', 'Gohir.A08G008650' => 'ghi', 'Gohir.A09G072700' => 'ghi', 'Gohir.A09G088301' => 'ghi', 'Gohir.A10G040600' => 'ghi', 'Gohir.A12G036300' => 'ghi', 'Gohir.A12G143350' => 'ghi', 'Gohir.A12G165500' => 'ghi', 'Gohir.A13G145700' => 'ghi', 'Gohir.D01G050000' => 'ghi', 'Gohir.D01G051366' => 'ghi', 'Gohir.D01G161350' => 'ghi', 'Gohir.D02G065900' => 'ghi', 'Gohir.D05G164200' => 'ghi', 'Gohir.D05G355500' => 'ghi', 'Gohir.D06G010400' => 'ghi', 'Gohir.D06G111250' => 'ghi', 'Gohir.D06G132000' => 'ghi', 'Gohir.D06G210500' => 'ghi', 'Gohir.D07G165675' => 'ghi', 'Gohir.D08G062240' => 'ghi', 'Gohir.D08G086101' => 'ghi', 'Gohir.D08G138060' => 'ghi', 'Gohir.D09G072300' => 'ghi', 'Gohir.D10G041400' => 'ghi', 'Gohir.D11G191020' => 'ghi', 'Gohir.D11G212066' => 'ghi', 'Gohir.D12G036300' => 'ghi', 'Gohir.D12G168600' => 'ghi', 'Gohir.D13G150600' => 'ghi', 'Gorai.001G057300' => 'gra', 'Gorai.002G069900' => 'gra', 'Gorai.002G200000' => 'gra', 'Gorai.003G067600' => 'gra', 'Gorai.005G074800' => 'gra', 'Gorai.006G087300' => 'gra', 'Gorai.008G037500' => 'gra', 'Gorai.008G181400' => 'gra', 'Gorai.009G169400' => 'gra', 'Gorai.009G387900' => 'gra', 'Gorai.010G013300' => 'gra', 'Gorai.010G153800' => 'gra', 'Gorai.010G255800' => 'gra', 'Gorai.011G043700' => 'gra', 'Gorai.011G198900' => 'gra', 'Gorai.013G168400' => 'gra', 'GSVIVG01005212001' => 'vvi', 'GSVIVG01006163001' => 'vvi', 'GSVIVG01009625001' => 'vvi', 'GSVIVG01014338001' => 'vvi', 'GSVIVG01020005001' => 'vvi', 'GSVIVG01021450001' => 'vvi', 'GSVIVG01023975001' => 'vvi', 'GSVIVG01034490001' => 'vvi', 'HanXRQChr04g0112071' => 'han', 'HanXRQChr05g0131151' => 'han', 'HanXRQChr09g0262371' => 'han', 'HanXRQChr09g0268401' => 'han', 'HanXRQChr10g0279241' => 'han', 'HanXRQChr10g0297961' => 'han', 'HanXRQChr11g0326231' => 'han', 'HanXRQChr11g0328471' => 'han', 'HanXRQChr16g0507941' => 'han', 'HanXRQChr17g0560211' => 'han', 'Haze_02108' => 'cav', 'Haze_02428' => 'cav', 'Haze_05593' => 'cav', 'Haze_06448' => 'cav', 'Haze_09427' => 'cav', 'Haze_12022' => 'cav', 'Haze_17612' => 'cav', 'Haze_17928' => 'cav', 'Hma1.2p1_0032F.1_g019250' => 'hma', 'Hma1.2p1_0163F.1_g072690' => 'hma', 'Hma1.2p1_0265F.1_g106710' => 'hma', 'Hma1.2p1_0286F.1_g113970' => 'hma', 'Hma1.2p1_0363F.1_g136640' => 'hma', 'Hma1.2p1_0584F.1_g183470' => 'hma', 'Hma1.2p1_0885F.1_g232570' => 'hma', 'HPP92_006022' => 'vpl', 'HPP92_007320' => 'vpl', 'HPP92_011521' => 'vpl', 'HPP92_019387' => 'vpl', 'HPP92_024038' => 'vpl', 'Hund05891' => 'sun', 'Hund06450' => 'sun', 'Hund12053' => 'sun', 'Hund16800' => 'sun', 'Hund21222' => 'sun', 'Hund22896' => 'sun', 'Hund23746' => 'sun', 'Hund27083' => 'sun', 'Lalb_Chr02g0141831' => 'lal', 'Lalb_Chr02g0141841' => 'lal', 'Lalb_Chr05g0220411' => 'lal', 'Lalb_Chr06g0162081' => 'lal', 'Lalb_Chr09g0327651' => 'lal', 'Lalb_Chr13g0295051' => 'lal', 'Lalb_Chr15g0086801' => 'lal', 'Lalb_Chr16g0383781' => 'lal', 'Lalb_Chr16g0383791' => 'lal', 'Lalb_Chr18g0055441' => 'lal', 'Lalb_Chr18g0059611' => 'lal', 'Lalb_Chr20g0109661' => 'lal', 'Lalb_Chr20g0109831' => 'lal', 'Lalb_Chr20g0121871' => 'lal', 'Lalb_Chr22g0355361' => 'lal', 'Lalb_Chr25g0286371' => 'lal', 'Lj1A1187G43' => 'lonja', 'Lj1A1205T50' => 'lonja', 'Lj1A800G33' => 'lonja', 'Lj1C1187T7' => 'lonja', 'Lj1C843T11' => 'lonja', 'Lj1g0010940' => 'lja', 'Lj2A288T69' => 'lonja', 'Lj3g0024276' => 'lja', 'Lj4A47T76' => 'lonja', 'Lj4g0005805' => 'lja', 'Lj4g0006097' => 'lja', 'Lj4g0008528' => 'lja', 'Lj4g0024907' => 'lja', 'Lj5g0012472' => 'lja', 'Lj5g0018648' => 'lja', 'Lj6C789G1' => 'lonja', 'Lj6g0004000' => 'lja', 'Lj7A292G67' => 'lonja', 'Lj7A292T64' => 'lonja', 'Lj9A400T58' => 'lonja', 'Lsat_1_v5_gn_1_126181' => 'lsa', 'Lsat_1_v5_gn_4_123041' => 'lsa', 'Lsat_1_v5_gn_4_133620' => 'lsa', 'Lsat_1_v5_gn_4_53221' => 'lsa', 'Lsat_1_v5_gn_4_71961' => 'lsa', 'Lsat_1_v5_gn_7_105241' => 'lsa', 'Lsat_1_v5_gn_7_21361' => 'lsa', 'Lsat_1_v5_gn_7_28860' => 'lsa', 'Lsat_1_v5_gn_7_31260' => 'lsa', 'Lsat_1_v5_gn_8_52801' => 'lsa', 'Manes.02G191400' => 'mes', 'Manes.03G110100' => 'mes', 'Manes.04G071100' => 'mes', 'Manes.05G100500' => 'mes', 'Manes.05G164700' => 'mes', 'Manes.15G087000' => 'mes', 'Manes.15G121500' => 'mes', 'Manes.16G028300' => 'mes', 'Manes.17G046100' => 'mes', 'Manes.17G069800' => 'mes', 'Manes.18G100500' => 'mes', 'Mapoly0002s0109' => 'mpo', 'Mapoly0024s0007' => 'mpo', 'Mapoly0089s0032' => 'mpo', 'MBI04_g42241_MAGBIO' => 'mbi', 'MBI05_g11988_MAGBIO' => 'mbi', 'MBI05_g35452_MAGBIO' => 'mbi', 'MBI07_g30179_MAGBIO' => 'mbi', 'MBI07_g35859_MAGBIO' => 'mbi', 'MBI07_g35860_MAGBIO' => 'mbi', 'MBI07_g37166_MAGBIO' => 'mbi', 'MBI08_g18172_MAGBIO' => 'mbi', 'MBI09_g08441_MAGBIO' => 'mbi', 'MBI13_g01676_MAGBIO' => 'mbi', 'MBI14_g42955_MAGBIO' => 'mbi', 'MBI16_g13161_MAGBIO' => 'mbi', 'MBI17_g27204_MAGBIO' => 'mbi', 'MBI19_g21595_MAGBIO' => 'mbi', 'MD00G1148400' => 'mdo', 'MD02G1301200' => 'mdo', 'MD03G1227800' => 'mdo', 'MD05G1041100' => 'mdo', 'MD05G1124800' => 'mdo', 'MD05G1284000' => 'mdo', 'MD05G1338800' => 'mdo', 'MD05G1338900' => 'mdo', 'MD07G1022800' => 'mdo', 'MD10G1047500' => 'mdo', 'MD10G1127500' => 'mdo', 'MD10G1262300' => 'mdo', 'MD10G1293800' => 'mdo', 'MD16G1074300' => 'mdo', 'Medtr1g021670' => 'mtr', 'Medtr1g096320' => 'mtr', 'Medtr2g013690' => 'mtr', 'Medtr2g019450' => 'mtr', 'Medtr2g085170' => 'mtr', 'Medtr4g088785' => 'mtr', 'Medtr8g055930' => 'mtr', 'Medtr8g085850' => 'mtr', 'MELO3C002605.2' => 'cme', 'MELO3C003891.2' => 'cme', 'MELO3C004012.2' => 'cme', 'MELO3C007134.2' => 'cme', 'MELO3C008118.2' => 'cme', 'MELO3C016700.2' => 'cme', 'MELO3C024127.2' => 'cme', 'MELO3C033361.2' => 'cme', 'MELO3C033362.2' => 'cme', 'Migut.C00430' => 'egut', 'Migut.C01246' => 'egut', 'Migut.E00101' => 'egut', 'Migut.H01486' => 'egut', 'Migut.H01939' => 'egut', 'Migut.K00360' => 'egut', 'Migut.M00910' => 'egut', 'Migut.M01139' => 'egut', 'Migut.N02677' => 'egut', 'MSTRG.13252' => 'ama', 'MSTRG.14701' => 'ama', 'MSTRG.1521' => 'ama', 'MSTRG.15884' => 'ama', 'MSTRG.16242' => 'ama', 'MSTRG.22285' => 'ama', 'MSTRG.22444' => 'ama', 'MSTRG.2349' => 'ama', 'MSTRG.26308' => 'ama', 'MSTRG.28296' => 'ama', 'MSTRG.9895' => 'ama', 'Nitab4.5_0000110g0060' => 'nta', 'Nitab4.5_0000420g0130' => 'nta', 'Nitab4.5_0000422g0030' => 'nta', 'Nitab4.5_0000560g0180' => 'nta', 'Nitab4.5_0000703g0100' => 'nta', 'Nitab4.5_0000786g0200' => 'nta', 'Nitab4.5_0001336g0020' => 'nta', 'Nitab4.5_0001796g0030' => 'nta', 'Nitab4.5_0003348g0060' => 'nta', 'Nitab4.5_0003698g0040' => 'nta', 'Nitab4.5_0003942g0090' => 'nta', 'Nitab4.5_0004775g0070' => 'nta', 'Nitab4.5_0004864g0030' => 'nta', 'Nitab4.5_0005615g0020' => 'nta', 'Nitab4.5_0009288g0030' => 'nta', 'Nitab4.5_0009341g0010' => 'nta', 'Nitab4.5_0009535g0010' => 'nta', 'Nn1g03995' => 'nnu', 'Nn1g04100' => 'nnu', 'Nn1g06530' => 'nnu', 'Nn3g16404' => 'nnu', 'Nn3g17212' => 'nnu', 'Nn3g20776' => 'nnu', 'Nn3g21923' => 'nnu', 'Nn5g27737' => 'nnu', 'Nn5g29461' => 'nnu', 'Nn7g38355' => 'nnu', 'Nn8g39873' => 'nnu', 'Oeu000548.2' => 'oeu', 'Oeu004672.1' => 'oeu', 'Oeu015605.2' => 'oeu', 'Oeu016092.1' => 'oeu', 'Oeu017879.3' => 'oeu', 'Oeu024910.1' => 'oeu', 'Oeu028965.1' => 'oeu', 'Oeu031269.1' => 'oeu', 'Oeu031270.1' => 'oeu', 'Oeu032535.1' => 'oeu', 'Oeu034151.1' => 'oeu', 'Oeu034152.1' => 'oeu', 'Oeu034588.2' => 'oeu', 'Oeu050846.1' => 'oeu', 'Oeu050849.2' => 'oeu', 'Oeu051063.2' => 'oeu', 'Oeu052368.1' => 'oeu', 'Oeu052370.1' => 'oeu', 'Os01g0210400' => 'osa', 'Os01g0304300' => 'osa', 'Os01g0749100' => 'osa', 'Os02g0745800' => 'osa', 'Os03g0769050' => 'osa', 'Os05g0531500' => 'osa', 'Os06g0724300' => 'osa', 'Os11g0198100' => 'osa', 'Peaxi162Scf00069g01425' => 'pax', 'Peaxi162Scf00280g00811' => 'pax', 'Peaxi162Scf00310g00615' => 'pax', 'Peaxi162Scf00362g00542' => 'pax', 'Peaxi162Scf00461g00310' => 'pax', 'Peaxi162Scf00530g00118' => 'pax', 'Peaxi162Scf00541g00057' => 'pax', 'Peaxi162Scf00661g00017' => 'pax', 'Peaxi162Scf00926g00027' => 'pax', 'Peaxi162Scf01064g00263' => 'pax', 'Peaxi162Scf01211g00135' => 'pax', 'PGR004G2336' => 'pgr', 'PGR042G0327' => 'pgr', 'PGR042G1957' => 'pgr', 'PGR042G2003' => 'pgr', 'PGR042G3929' => 'pgr', 'PGR083G1137' => 'pgr', 'PGR083G1364' => 'pgr', 'PGSC0003DMG400003381' => 'stu', 'PGSC0003DMG400003417' => 'stu', 'PGSC0003DMG400008981' => 'stu', 'PGSC0003DMG400012417' => 'stu', 'PGSC0003DMG400012823' => 'stu', 'PGSC0003DMG400016885' => 'stu', 'PGSC0003DMG400022812' => 'stu', 'PGSC0003DMG400029726' => 'stu', 'PGSC0003DMG401009243' => 'stu', 'PGSC0003DMG401031505' => 'stu', 'PGSC0003DMG402031505' => 'stu', 'Phvul.001G017600' => 'pvu', 'Phvul.002G193500' => 'pvu', 'Phvul.002G228900' => 'pvu', 'Phvul.002G236800' => 'pvu', 'Phvul.003G049500' => 'pvu', 'Phvul.005G072000' => 'pvu', 'Phvul.006G164800' => 'pvu', 'Phvul.006G185100' => 'pvu', 'Phvul.007G090000' => 'pvu', 'Potri.001G399800' => 'ptr', 'Potri.002G149900' => 'ptr', 'Potri.004G044100' => 'ptr', 'Potri.004G177600' => 'ptr', 'Potri.009G138000' => 'ptr', 'Potri.010G094000' => 'ptr', 'Potri.011G053000' => 'ptr', 'Potri.011G119300' => 'ptr', 'Potri.013G113700' => 'ptr', 'Potri.018G107800' => 'ptr', 'Potri.019G084100' => 'ptr', 'Pp3c14_23720' => 'ppa', 'Pp3c16_6340' => 'ppa', 'Pp3c23_13420' => 'ppa', 'Pp3c24_2740' => 'ppa', 'Pp3c25_860' => 'ppa', 'Pp3c8_21750' => 'ppa', 'Prupe.1G273000' => 'ppe', 'Prupe.1G273700' => 'ppe', 'Prupe.1G274100' => 'ppe', 'Prupe.2G023300' => 'ppe', 'Prupe.4G048000' => 'ppe', 'Prupe.4G080400' => 'ppe', 'Prupe.4G181200' => 'ppe', 'Prupe.8G056900' => 'ppe', 'Prupe.8G168700' => 'ppe', 'Psat1g189080' => 'psa', 'Psat1g204760' => 'psa', 'Psat4g175560' => 'psa', 'Psat4g177720' => 'psa', 'Psat5g244240' => 'psa', 'Psat6g010720' => 'psa', 'Psat6g187200' => 'psa', 'Psat7g072040' => 'psa', 'PSO017G3501' => 'pso', 'PSO063G2148' => 'pso', 'PSO063G5608' => 'pso', 'PSO210G6392' => 'pso', 'PSO541G2319' => 'pso', 'PSO541G2836' => 'pso', 'PSO541G4012' => 'pso', 'PSO541G6253' => 'pso', 'PSO675G0580' => 'pso', 'PSO675G0856' => 'pso', 'PSO675G5635' => 'pso', 'PSO675G9157' => 'pso', 'PSO832G1660' => 'pso', 'PSO832G1969' => 'pso', 'QL02p007186' => 'qlo', 'QL02p033904' => 'qlo', 'QL03p064391' => 'qlo', 'QL05p040593' => 'qlo', 'QL05p058242' => 'qlo', 'QL08p021825' => 'qlo', 'QL11p004981' => 'qlo', 'RcHm_v2.0_Chr1g0318301' => 'rch', 'RcHm_v2.0_Chr4g0418501' => 'rch', 'RcHm_v2.0_Chr4g0439971' => 'rch', 'RcHm_v2.0_Chr5g0008541' => 'rch', 'RcHm_v2.0_Chr5g0014101' => 'rch', 'RcHm_v2.0_Chr5g0014131' => 'rch', 'RcHm_v2.0_Chr5g0033621' => 'rch', 'RcHm_v2.0_Chr6g0272041' => 'rch', 'RcHm_v2.0_Chr6g0278831' => 'rch', 'Rhsim02G0130400' => 'rsi', 'Rhsim02G0171100' => 'rsi', 'Rhsim05G0053000' => 'rsi', 'Rhsim05G0053100' => 'rsi', 'Rhsim06G0096500' => 'rsi', 'Rhsim06G0096600' => 'rsi', 'Rhsim06G0199100' => 'rsi', 'Rhsim12G0062300' => 'rsi', 'Rhsim12G0062800' => 'rsi', 'Sabra02G0118600' => 'sbr', 'Sabra04G0027300' => 'sbr', 'Sabra04G0119500' => 'sbr', 'Sabra08G0112500' => 'sbr', 'Sabra11G0036800' => 'sbr', 'Sabra11G0103800' => 'sbr', 'Sabra13G0096300' => 'sbr', 'Sabra16G0262300' => 'sbr', 'Sabra18G0091700' => 'sbr', 'Sabra19G0095400' => 'sbr', 'SalBow6G3080' => 'sbo', 'SalBow7G1157' => 'sbo', 'SalBow7G2123' => 'sbo', 'SalBow7G2285' => 'sbo', 'SalBow7G3537' => 'sbo', 'SalBow8G2947' => 'sbo', 'SalBow8G4463' => 'sbo', 'SalBow8G5466' => 'sbo', 'Sc01g0001750' => 'sci', 'Sc02g0006640' => 'sci', 'Sc02g0006670' => 'sci', 'Sc04g0008220' => 'sci', 'Sc05g0006190' => 'sci', 'Sc08g0002760' => 'sci', 'Sc17g0006170' => 'sci', 'Sc22g0002050' => 'sci', 'Sc23g0001190' => 'sci', 'Sc24g0000980' => 'sci', 'Sed0006245' => 'sed', 'Sed0007543' => 'sed', 'Sed0009411' => 'sed', 'Sed0010765' => 'sed', 'Sed0012944' => 'sed', 'Sed0014682' => 'sed', 'Sed0016174' => 'sed', 'Sed0016796' => 'sed', 'Sed0020317' => 'sed', 'Sed0021467' => 'sed', 'SEGI_01316' => 'sgi', 'SEGI_03374' => 'sgi', 'SEGI_16265' => 'sgi', 'SEGI_18569' => 'sgi', 'SEGI_20351' => 'sgi', 'SEGI_26395' => 'sgi', 'SEGI_29469' => 'sgi', 'SEGI_34771' => 'sgi', 'SEGI_36769' => 'sgi', 'SEGI_37139' => 'sgi', 'SGA_v2.0_scaffold100G29687' => 'sas', 'SGA_v2.0_scaffold118G32472' => 'sas', 'SGA_v2.0_scaffold14G07051' => 'sas', 'SGA_v2.0_scaffold183G39845' => 'sas', 'SGA_v2.0_scaffold1G00174' => 'sas', 'SGA_v2.0_scaffold22G09714' => 'sas', 'SGA_v2.0_scaffold333G48992' => 'sas', 'SGA_v2.0_scaffold46G17491' => 'sas', 'SGA_v2.0_scaffold49G18294' => 'sas', 'SGA_v2.0_scaffold63G21658' => 'sas', 'SHI01741' => 'shi', 'SHI05771' => 'shi', 'SHI18077' => 'shi', 'SHI20525' => 'shi', 'SHI20527' => 'shi', 'SHI20528' => 'shi', 'SMO172G0185' => 'smo', 'SMO198G0020' => 'smo', 'SMO351G0006' => 'smo', 'SMO356G0118' => 'smo', 'SMO358G0296' => 'smo', 'SMO367G0079' => 'smo', 'SMO367G1277' => 'smo', 'Solyc01g014220.3' => 'sly', 'Solyc01g111770.2' => 'sly', 'Solyc02g078180.3' => 'sly', 'Solyc03g006430.3' => 'sly', 'Solyc03g006456.1' => 'sly', 'Solyc03g079860.2' => 'sly', 'Solyc04g079770.3' => 'sly', 'Solyc05g007430.4' => 'sly', 'Solyc07g063150.3' => 'sly', 'Solyc08g016620.3' => 'sly', 'Solyc09g057590.3' => 'sly', 'Solyc09g057600.1' => 'sly', 'Solyc10g009050.3' => 'sly', 'Solyc11g017420.2' => 'sly', 'Sopen01g053810' => 'spe', 'Sopen02g023040' => 'spe', 'Sopen03g002440' => 'spe', 'Sopen04g033350' => 'spe', 'Sopen05g003310' => 'spe', 'Sopen07g004050' => 'spe', 'Sopen07g031340' => 'spe', 'Sopen08g006990' => 'spe', 'Sopen10g004830' => 'spe', 'Sopen11g009370' => 'spe', 'Sp1g24450' => 'spa', 'Sp1g29670' => 'spa', 'Sp1g39600' => 'spa', 'Sp2g11080' => 'spa', 'Sp2g13970' => 'spa', 'Sp4g16130' => 'spa', 'Sp6g13080' => 'spa', 'Sp7g37270' => 'spa', 'TAR371G0065' => 'tar', 'TAR376G0340' => 'tar', 'TAR376G0435' => 'tar', 'TAR381G0002' => 'tar', 'TAR381G1236' => 'tar', 'TAR624G0055' => 'tar', 'TAR624G0324' => 'tar', 'TAR624G0696' => 'tar', 'TAR624G0906' => 'tar', 'TAR625G0107' => 'tar', 'TAR626G0015' => 'tar', 'TAR626G1356' => 'tar', 'TAR627G0888' => 'tar', 'TAR628G0399' => 'tar', 'TAR628G1327' => 'tar', 'TAR629G2831' => 'tar', 'TAR629G2874' => 'tar', 'TAR633G1432' => 'tar', 'TAR633G2771' => 'tar', 'THA.LOC104803394' => 'tha', 'THA.LOC104805153' => 'tha', 'THA.LOC104806784' => 'tha', 'THA.LOC104810473' => 'tha', 'THA.LOC104813100' => 'tha', 'THA.LOC104814215' => 'tha', 'THA.LOC104815554' => 'tha', 'THA.LOC104820544' => 'tha', 'THA.LOC104824754' => 'tha', 'THA.LOC104827717' => 'tha', 'Thecc.02G031400' => 'tca', 'Thecc.02G055900' => 'tca', 'Thecc.02G350800' => 'tca', 'Thecc.06G150900' => 'tca', 'Thecc.06G186600' => 'tca', 'Thecc.07G089600' => 'tca', 'Thecc.08G020400' => 'tca', 'Thecc.08G182100' => 'tca', 'Thhalv10000873m.g' => 'esa', 'Thhalv10004185m.g' => 'esa', 'Thhalv10006981m.g' => 'esa', 'Thhalv10007204m.g' => 'esa', 'Thhalv10011374m.g' => 'esa', 'Thhalv10013482m.g' => 'esa', 'Thhalv10017801m.g' => 'esa', 'Thhalv10024983m.g' => 'esa', 'TPR.G12072' => 'tpr', 'TPR.G15769' => 'tpr', 'TPR.G16504' => 'tpr', 'TPR.G16506' => 'tpr', 'TPR.G24345' => 'tpr', 'TPR.G26666' => 'tpr', 'TPR.G27320' => 'tpr', 'TPR.G31819' => 'tpr', 'TPR.G38879' => 'tpr', 'TPR.G39015' => 'tpr', 'TPR.G8819' => 'tpr', 'TWI09G0924' => 'twi', 'TWI12G0811' => 'twi', 'TWI12G1294' => 'twi', 'TWI31G0150' => 'twi', 'TWI36G1262' => 'twi', 'TWI38G1287' => 'twi', 'TWI38G1633' => 'twi', 'TWI38G1982' => 'twi', 'TWI39G0116' => 'twi', 'TWI60G1011' => 'twi', 'TWI63G0171' => 'twi', 'TWI73G0839' => 'twi', 'TWI79G1511' => 'twi', 'unitig_0.g915' => 'ugi', 'unitig_0.g916' => 'ugi', 'unitig_21.g20219' => 'ugi', 'unitig_21.g20416' => 'ugi', 'unitig_578.g16132' => 'ugi', 'unitig_578.g16718' => 'ugi', 'unitig_62.g23481' => 'ugi', 'unitig_744.g24535' => 'ugi', 'unitig_749.g13525' => 'ugi', 'vmacro01248' => 'vma', 'vmacro02290' => 'vma', 'vmacro10946' => 'vma', 'vmacro11865' => 'vma', 'vmacro12493' => 'vma', 'vmacro17322' => 'vma', 'vmacro21599' => 'vma', 'vmacro23041' => 'vma', 'VMungo0251G0004' => 'vmu', 'VMungo0251G2639' => 'vmu', 'VMungo0251G2967' => 'vmu', 'VMungo0540G0864' => 'vmu', 'VMungo0540G1569' => 'vmu', 'VMungo0647G0317' => 'vmu', 'VMungo0720G1373' => 'vmu', 'VMungo0720G1508' => 'vmu', 'VMungo1080G0485' => 'vmu', 'VMungo1215G3177' => 'vmu', 'Zm00001eb112600' => 'zma', 'Zm00001eb120220' => 'zma', 'Zm00001eb153240' => 'zma', 'Zm00001eb168880' => 'zma', 'Zm00001eb213920' => 'zma', 'Zm00001eb228280' => 'zma', 'Zm00001eb254580' => 'zma', 'Zm00001eb272180' => 'zma', 'Zm00001eb293190' => 'zma', 'Zm00001eb322930' => 'zma', 'Zm00001eb353360' => 'zma', 'Zm00001eb353390' => 'zma', 'Zm00001eb353430' => 'zma', 'Zm00001eb353440' => 'zma', 'Zm00001eb353780' => 'zma' ), 'gf_id' => 'HOM05D000499', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000499' ), 'data_identifier' => 'HOM05D000499', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000499', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1066', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p29780' => 'bna', 'A02p33180' => 'bna', 'A03p16470' => 'bna', 'A03p66010' => 'bna', 'A04p25970' => 'bna', 'A06p01270' => 'bna', 'A06p46080' => 'bna', 'A07p11400' => 'bna', 'A08p01840' => 'bna', 'A08p08230' => 'bna', 'A08p25740' => 'bna', 'A09p32070' => 'bna', 'A09p37830' => 'bna', 'A09p42840' => 'bna', 'A09p42850' => 'bna', 'Aa31LG10G2060' => 'aar', 'Aa31LG2G7410' => 'aar', 'Aa31LG6G10200' => 'aar', 'Aa31LG6G16680' => 'aar', 'Aa31LG6G8470' => 'aar', 'Aa31LG9G12730' => 'aar', 'Aa31LG9G13680' => 'aar', 'Aa31LG9G14920' => 'aar', 'Aa31LG9G6650' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4977' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5467' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3254' => 'aag', 'Actinidia02578' => 'ach', 'Actinidia07693' => 'ach', 'Actinidia08413' => 'ach', 'Actinidia08414' => 'ach', 'Actinidia15289' => 'ach', 'Actinidia19871' => 'ach', 'Actinidia21475' => 'ach', 'Actinidia22576' => 'ach', 'Actinidia28327' => 'ach', 'Actinidia32491' => 'ach', 'Actinidia39463' => 'ach', 'Actinidia39571' => 'ach', 'Ah.01g013750' => 'amhyb', 'Ah.01g023210' => 'amhyb', 'Ah.04g164850' => 'amhyb', 'Ah.05g178060' => 'amhyb', 'Ah.07g204270' => 'amhyb', 'Ah.07g208480' => 'amhyb', 'Ah.09g237410' => 'amhyb', 'Ah.14g089460' => 'amhyb', 'AL1G41790' => 'aly', 'AL1G49050' => 'aly', 'AL1G53810' => 'aly', 'AL1G61400' => 'aly', 'AL4G18580' => 'aly', 'AL5G12510' => 'aly', 'AL5G12540' => 'aly', 'AL6G43230' => 'aly', 'AL7G10370' => 'aly', 'AL7G19250' => 'aly', 'AL8G12240' => 'aly', 'AL8G18540' => 'aly', 'Aqoxy1G02409' => 'aox', 'Aqoxy2G03993' => 'aox', 'Aqoxy3G03357' => 'aox', 'Aqoxy4G00785' => 'aox', 'Aqoxy5G02598' => 'aox', 'Aqoxy6G00132' => 'aox', 'Aqoxy7G01776' => 'aox', 'Aqoxy7G02316' => 'aox', 'Aqoxy7G03973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.12AFKW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B8730' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27IQR1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3F75VG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3RE0GA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41TCQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.527VTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FIR39' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5W8UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DA38EV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ63HS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H1I32C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HC27T5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4M8AP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7N3CZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9UVDZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LS1NQA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT1D4B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SKC4TM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCFV76' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF9Q1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQWD9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1ZM88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WE07RT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YCK7VH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJE6Q6' => 'arhy', 'AT1G28240' => 'ath', 'AT1G34550' => 'ath', 'AT1G53040' => 'ath', 'AT2G02910' => 'ath', 'AT4G09630' => 'ath', 'AT4G38500' => 'ath', 'AT5G42660' => 'ath', 'AT5G46220' => 'ath', 'ATR0152G026' => 'atr', 'ATR0564G343' => 'atr', 'ATR0706G151' => 'atr', 'ATR0733G207' => 'atr', 'ATR0751G234' => 'atr', 'ATR0807G048' => 'atr', 'ATR1091G084' => 'atr', 'Atru.chr10.1229' => 'acertr', 'Atru.chr10.1230' => 'acertr', 'Atru.chr10.1874' => 'acertr', 'Atru.chr11.1808' => 'acertr', 'Atru.chr13.1795' => 'acertr', 'Atru.chr13.570' => 'acertr', 'Atru.chr2.2608' => 'acertr', 'Atru.chr2.2609' => 'acertr', 'Atru.chr5.3428' => 'acertr', 'Atru.chr8.1171' => 'acertr', 'AUR62004651' => 'cqu', 'AUR62008675' => 'cqu', 'AUR62010014' => 'cqu', 'AUR62013004' => 'cqu', 'AUR62014825' => 'cqu', 'AUR62015015' => 'cqu', 'AUR62015151' => 'cqu', 'AUR62017020' => 'cqu', 'AUR62019422' => 'cqu', 'AUR62023570' => 'cqu', 'AUR62025571' => 'cqu', 'AUR62029098' => 'cqu', 'AUR62033863' => 'cqu', 'AUR62034296' => 'cqu', 'AUR62040075' => 'cqu', 'BcaB02g07334' => 'bca', 'BcaB02g10575' => 'bca', 'BcaB03g12119' => 'bca', 'BcaB03g12120' => 'bca', 'BcaB03g13945' => 'bca', 'BcaB04g17123' => 'bca', 'BcaB04g17867' => 'bca', 'BcaB04g19839' => 'bca', 'BcaB07g30317' => 'bca', 'BcaB07g32432' => 'bca', 'BcaB07g33362' => 'bca', 'BcaB08g36611' => 'bca', 'BcaC01g00028' => 'bca', 'BcaC01g01356' => 'bca', 'BcaC01g02034' => 'bca', 'BcaC01g06051' => 'bca', 'BcaC03g16839' => 'bca', 'BcaC03g17176' => 'bca', 'BcaC05g26829' => 'bca', 'BcaC06g31490' => 'bca', 'BcaC06g35344' => 'bca', 'BcaC06g36570' => 'bca', 'BcaC07g37537' => 'bca', 'BcaC08g43491' => 'bca', 'BcaC08g43773' => 'bca', 'BcaNung00234' => 'bca', 'BcaNung01982' => 'bca', 'BcaNung03707' => 'bca', 'BcaNung06454' => 'bca', 'BolC2t10762H' => 'bol', 'BolC2t11191H' => 'bol', 'BolC3t14322H' => 'bol', 'BolC3t19747H' => 'bol', 'BolC3t21425H' => 'bol', 'BolC4t27800H' => 'bol', 'BolC5t31423H' => 'bol', 'BolC6t35951H' => 'bol', 'BolC6t36282H' => 'bol', 'BolC7t40678H' => 'bol', 'BolC7t40679H' => 'bol', 'BolC7t42222H' => 'bol', 'BolC7t43492H' => 'bol', 'BolC7t46785H' => 'bol', 'BolC8t47853H' => 'bol', 'BolC9t56805H' => 'bol', 'BraA02t08000Z' => 'bra', 'BraA02t08341Z' => 'bra', 'BraA03t10936Z' => 'bra', 'BraA03t15657Z' => 'bra', 'BraA04t18100Z' => 'bra', 'BraA05t20523Z' => 'bra', 'BraA06t23353Z' => 'bra', 'BraA06t27473Z' => 'bra', 'BraA06t27769Z' => 'bra', 'BraA07t28928Z' => 'bra', 'BraA08t32236Z' => 'bra', 'BraA08t32841Z' => 'bra', 'BraA08t34524Z' => 'bra', 'BraA09t38742Z' => 'bra', 'BraA09t39295Z' => 'bra', 'C02p47180' => 'bna', 'C02p50990' => 'bna', 'C03p19360' => 'bna', 'C03p74950' => 'bna', 'C03p91000' => 'bna', 'C04p63260' => 'bna', 'C05p27050' => 'bna', 'C06p08750' => 'bna', 'C06p11490' => 'bna', 'C07p02820' => 'bna', 'C07p17180' => 'bna', 'C07p29440' => 'bna', 'C07p63730' => 'bna', 'C09p39260' => 'bna', 'CAN.G1164.34' => 'can', 'CAN.G1164.39' => 'can', 'CAN.G1530.3' => 'can', 'CAN.G162.61' => 'can', 'CAN.G176.6' => 'can', 'CAN.G289.49' => 'can', 'CAN.G370.21' => 'can', 'CAN.G370.22' => 'can', 'CAN.G371.117' => 'can', 'CAN.G58.37' => 'can', 'CAN.G588.98' => 'can', 'CANSAT21G2266' => 'cansat', 'CANSAT25G2799' => 'cansat', 'CANSAT35G0862' => 'cansat', 'CANSAT35G1704' => 'cansat', 'CANSAT35G1760' => 'cansat', 'CANSAT56G3971' => 'cansat', 'CANSAT56G4116' => 'cansat', 'CANSAT80G1259' => 'cansat', 'CARHR027730' => 'chi', 'CARHR033880' => 'chi', 'CARHR043270' => 'chi', 'CARHR145330' => 'chi', 'CARHR145340' => 'chi', 'CARHR175570' => 'chi', 'CARHR181570' => 'chi', 'CARHR258470' => 'chi', 'CARHR260490' => 'chi', 'CARHR294220' => 'chi', 'Carub.0001s2668' => 'cru', 'Carub.0001s3257' => 'cru', 'Carub.0001s4220' => 'cru', 'Carub.0005s0179' => 'cru', 'Carub.0006s2807' => 'cru', 'Carub.0007s0039' => 'cru', 'Carub.0008s0169' => 'cru', 'Carub.0008s0636' => 'cru', 'Ca_00338_v3' => 'car', 'Ca_00542_v3' => 'car', 'Ca_01844_v3' => 'car', 'Ca_10611_v3' => 'car', 'Ca_13326_v3' => 'car', 'Ca_17944_v3' => 'car', 'Ca_18546_v3' => 'car', 'Ca_24219_v3' => 'car', 'Ca_29972_v3' => 'car', 'CBR_g3681' => 'cbr', 'CBR_g40021' => 'cbr', 'Cc01_g08140' => 'ccan', 'Cc02_g13410' => 'ccan', 'Cc02_g37480' => 'ccan', 'Cc05_g12030' => 'ccan', 'Cc09_g03370' => 'ccan', 'Cc09_g10300' => 'ccan', 'Cc10_g03530' => 'ccan', 'Cc10_g11380' => 'ccan', 'CDE01G0176' => 'cde', 'CDE02G0675' => 'cde', 'CDE02G0942' => 'cde', 'CDE02G1153' => 'cde', 'CDE02G4177' => 'cde', 'CDE04G2117' => 'cde', 'CDE04G2736' => 'cde', 'CDE08G1161' => 'cde', 'CDE09G1238' => 'cde', 'Cfa000467' => 'cfa', 'Cfa000947' => 'cfa', 'Cfa004969' => 'cfa', 'Cfa005284' => 'cfa', 'Cfa008993' => 'cfa', 'Cfa018187' => 'cfa', 'Cfa018454' => 'cfa', 'Cfa020585' => 'cfa', 'Ciclev10000424m.g' => 'ccl', 'Ciclev10003605m.g' => 'ccl', 'Ciclev10007828m.g' => 'ccl', 'Ciclev10014620m.g' => 'ccl', 'Ciclev10015169m.g' => 'ccl', 'Ciclev10018291m.g' => 'ccl', 'Ciclev10028256m.g' => 'ccl', 'Ciclev10033822m.g' => 'ccl', 'CiPaw.05G060300' => 'cil', 'CiPaw.05G085000' => 'cil', 'CiPaw.06G083700' => 'cil', 'CiPaw.06G120300' => 'cil', 'CiPaw.09G060500' => 'cil', 'CiPaw.09G123800' => 'cil', 'CiPaw.11G169700' => 'cil', 'CiPaw.12G118300' => 'cil', 'CiPaw.15G071000' => 'cil', 'CiPaw.15G081900' => 'cil', 'ClCG01G024610' => 'cla', 'ClCG03G006070' => 'cla', 'ClCG05G019250' => 'cla', 'ClCG09G009500' => 'cla', 'ClCG11G008200' => 'cla', 'ClCG11G018080' => 'cla', 'COL.COLO4_17373' => 'col', 'COL.COLO4_22994' => 'col', 'COL.COLO4_26389' => 'col', 'COL.COLO4_27170' => 'col', 'COL.COLO4_31074' => 'col', 'COL.COLO4_31465' => 'col', 'COL.COLO4_36438' => 'col', 'COL.COLO4_36439' => 'col', 'Cpa.g.c38781' => 'cpa', 'Cpa.g.sc128.12' => 'cpa', 'Cpa.g.sc166.7' => 'cpa', 'Cpa.g.sc166.8' => 'cpa', 'Cpa.g.sc20.111' => 'cpa', 'Cpa.g.sc27.31' => 'cpa', 'Cpa.g.sc64.36' => 'cpa', 'Cpa.g.sc64.37' => 'cpa', 'Cpa.g.sc66.49' => 'cpa', 'Cpa.g.sc80.64' => 'cpa', 'CsaV3_1G012320' => 'csa', 'CsaV3_2G008480' => 'csa', 'CsaV3_2G033450' => 'csa', 'CsaV3_3G044830' => 'csa', 'CsaV3_4G033710' => 'csa', 'CsaV3_6G051730' => 'csa', 'CsaV3_7G025350' => 'csa', 'CSS0001067' => 'camsi', 'CSS0005996' => 'camsi', 'CSS0006590' => 'camsi', 'CSS0009673' => 'camsi', 'CSS0010201' => 'camsi', 'CSS0010549' => 'camsi', 'CSS0011364' => 'camsi', 'CSS0014473' => 'camsi', 'CSS0014961' => 'camsi', 'CSS0020191' => 'camsi', 'CSS0021165' => 'camsi', 'CSS0022306' => 'camsi', 'CSS0030591' => 'camsi', 'CSS0030696' => 'camsi', 'CSS0032653' => 'camsi', 'CSS0037487' => 'camsi', 'CSS0041102' => 'camsi', 'CSS0041261' => 'camsi', 'CSS0046246' => 'camsi', 'CSS0049256' => 'camsi', 'DCAR_004075' => 'dca', 'DCAR_011538' => 'dca', 'DCAR_019553' => 'dca', 'DCAR_020952' => 'dca', 'DCAR_021739' => 'dca', 'DCAR_027407' => 'dca', 'DCAR_027913' => 'dca', 'DCAR_028066' => 'dca', 'Dinv05899' => 'din', 'Dinv07563' => 'din', 'Dinv08010' => 'din', 'Dinv14125' => 'din', 'Dinv20172' => 'din', 'Dinv30743' => 'din', 'Dinv31229' => 'din', 'Dinv34162' => 'din', 'Dinv36028' => 'din', 'Dinv39368' => 'din', 'Dinv40565' => 'din', 'Dinv41706' => 'din', 'Duzib052G0089' => 'dzi', 'Duzib116G0641' => 'dzi', 'Duzib132G0069' => 'dzi', 'Duzib132G1219' => 'dzi', 'Duzib147G0278' => 'dzi', 'Duzib160G0480' => 'dzi', 'Duzib170G0661' => 'dzi', 'Duzib177G0591' => 'dzi', 'Duzib187G1353' => 'dzi', 'Duzib192G0858' => 'dzi', 'Duzib192G0883' => 'dzi', 'Duzib213G0506' => 'dzi', 'Duzib235G0289' => 'dzi', 'Duzib251G0422' => 'dzi', 'ECA232G3898' => 'eca', 'ECA233G5950' => 'eca', 'ECA234G1699' => 'eca', 'ECA234G2421' => 'eca', 'ECA236G0426' => 'eca', 'ECA236G4331' => 'eca', 'ECA248G2573' => 'eca', 'EL10Ac1g00077' => 'bvu', 'EL10Ac1g01746' => 'bvu', 'EL10Ac2g03464' => 'bvu', 'EL10Ac4g08176' => 'bvu', 'EL10Ac7g17521' => 'bvu', 'EL10Ac8g20386' => 'bvu', 'EL10Ac9g21343' => 'bvu', 'EL10Ac9g22688' => 'bvu', 'Eucgr.B03434' => 'egr', 'Eucgr.D00618' => 'egr', 'Eucgr.E02395' => 'egr', 'Eucgr.F01129' => 'egr', 'Eucgr.F02622' => 'egr', 'Eucgr.F04207' => 'egr', 'FAN01G0570' => 'fan', 'FAN03G3351' => 'fan', 'FAN06G3702' => 'fan', 'FAN07G2149' => 'fan', 'FAN10G3758' => 'fan', 'FAN11G1170' => 'fan', 'FAN11G2050' => 'fan', 'FAN11G2724' => 'fan', 'FAN12G1700' => 'fan', 'FAN12G2028' => 'fan', 'FAN15G1160' => 'fan', 'FAN15G3063' => 'fan', 'FAN16G2540' => 'fan', 'FAN16G3077' => 'fan', 'FAN16G3624' => 'fan', 'FAN17G0221' => 'fan', 'FAN20G2492' => 'fan', 'FAN20G2905' => 'fan', 'FAN21G0548' => 'fan', 'FAN21G1300' => 'fan', 'FAN22G0077' => 'fan', 'FAN22G1315' => 'fan', 'FAN24G1280' => 'fan', 'FAN24G1445' => 'fan', 'FAN24G3527' => 'fan', 'FAN25G0464' => 'fan', 'FAN25G2885' => 'fan', 'FAN25G3270' => 'fan', 'FAN27G1101' => 'fan', 'FAN27G2846' => 'fan', 'FAN27G3524' => 'fan', 'FvH4_2g11770' => 'fve', 'FvH4_2g15630' => 'fve', 'FvH4_3g05570' => 'fve', 'FvH4_3g09110' => 'fve', 'FvH4_3g19940' => 'fve', 'FvH4_4g04821' => 'fve', 'FvH4_4g31480' => 'fve', 'FvH4_7g01740' => 'fve', 'Glyma.05G130400' => 'gma', 'Glyma.05G156400' => 'gma', 'Glyma.07G197000' => 'gma', 'Glyma.08G085151' => 'gma', 'Glyma.08G114500' => 'gma', 'Glyma.08G300400' => 'gma', 'Glyma.10G215800' => 'gma', 'Glyma.12G224400' => 'gma', 'Glyma.13G179300' => 'gma', 'Glyma.13G218151' => 'gma', 'Glyma.13G238800' => 'gma', 'Glyma.13G276900' => 'gma', 'Glyma.14G078200' => 'gma', 'Glyma.15G074500' => 'gma', 'Glyma.15G094100' => 'gma', 'Glyma.17G247200' => 'gma', 'Glyma.18G120100' => 'gma', 'Glyma.20G176000' => 'gma', 'Gohir.A01G063600' => 'ghi', 'Gohir.A01G170301' => 'ghi', 'Gohir.A02G060500' => 'ghi', 'Gohir.A05G133850' => 'ghi', 'Gohir.A05G161400' => 'ghi', 'Gohir.A06G012900' => 'ghi', 'Gohir.A06G035901' => 'ghi', 'Gohir.A06G127100' => 'ghi', 'Gohir.A06G210500' => 'ghi', 'Gohir.A08G008650' => 'ghi', 'Gohir.A09G072700' => 'ghi', 'Gohir.A09G088301' => 'ghi', 'Gohir.A10G040600' => 'ghi', 'Gohir.A12G036300' => 'ghi', 'Gohir.A12G143350' => 'ghi', 'Gohir.A12G165500' => 'ghi', 'Gohir.A13G145700' => 'ghi', 'Gohir.D01G050000' => 'ghi', 'Gohir.D01G051366' => 'ghi', 'Gohir.D01G161350' => 'ghi', 'Gohir.D02G065900' => 'ghi', 'Gohir.D05G164200' => 'ghi', 'Gohir.D05G355500' => 'ghi', 'Gohir.D06G010400' => 'ghi', 'Gohir.D06G111250' => 'ghi', 'Gohir.D06G132000' => 'ghi', 'Gohir.D06G210500' => 'ghi', 'Gohir.D07G165675' => 'ghi', 'Gohir.D08G062240' => 'ghi', 'Gohir.D08G086101' => 'ghi', 'Gohir.D08G138060' => 'ghi', 'Gohir.D09G072300' => 'ghi', 'Gohir.D10G041400' => 'ghi', 'Gohir.D11G191020' => 'ghi', 'Gohir.D11G212066' => 'ghi', 'Gohir.D12G036300' => 'ghi', 'Gohir.D12G168600' => 'ghi', 'Gohir.D13G150600' => 'ghi', 'Gorai.001G057300' => 'gra', 'Gorai.002G069900' => 'gra', 'Gorai.002G200000' => 'gra', 'Gorai.003G067600' => 'gra', 'Gorai.005G074800' => 'gra', 'Gorai.006G087300' => 'gra', 'Gorai.008G037500' => 'gra', 'Gorai.008G181400' => 'gra', 'Gorai.009G169400' => 'gra', 'Gorai.009G387900' => 'gra', 'Gorai.010G013300' => 'gra', 'Gorai.010G153800' => 'gra', 'Gorai.010G255800' => 'gra', 'Gorai.011G043700' => 'gra', 'Gorai.011G198900' => 'gra', 'Gorai.013G168400' => 'gra', 'GSVIVG01005212001' => 'vvi', 'GSVIVG01006163001' => 'vvi', 'GSVIVG01009625001' => 'vvi', 'GSVIVG01014338001' => 'vvi', 'GSVIVG01020005001' => 'vvi', 'GSVIVG01021450001' => 'vvi', 'GSVIVG01023975001' => 'vvi', 'GSVIVG01034490001' => 'vvi', 'HanXRQChr04g0112071' => 'han', 'HanXRQChr05g0131151' => 'han', 'HanXRQChr09g0262371' => 'han', 'HanXRQChr09g0268401' => 'han', 'HanXRQChr10g0279241' => 'han', 'HanXRQChr10g0297961' => 'han', 'HanXRQChr11g0326231' => 'han', 'HanXRQChr11g0328471' => 'han', 'HanXRQChr16g0507941' => 'han', 'HanXRQChr17g0560211' => 'han', 'Haze_02108' => 'cav', 'Haze_02428' => 'cav', 'Haze_05593' => 'cav', 'Haze_06448' => 'cav', 'Haze_09427' => 'cav', 'Haze_12022' => 'cav', 'Haze_17612' => 'cav', 'Haze_17928' => 'cav', 'Hma1.2p1_0032F.1_g019250' => 'hma', 'Hma1.2p1_0163F.1_g072690' => 'hma', 'Hma1.2p1_0265F.1_g106710' => 'hma', 'Hma1.2p1_0286F.1_g113970' => 'hma', 'Hma1.2p1_0363F.1_g136640' => 'hma', 'Hma1.2p1_0584F.1_g183470' => 'hma', 'Hma1.2p1_0885F.1_g232570' => 'hma', 'HPP92_006022' => 'vpl', 'HPP92_007320' => 'vpl', 'HPP92_011521' => 'vpl', 'HPP92_019387' => 'vpl', 'HPP92_024038' => 'vpl', 'Hund05891' => 'sun', 'Hund06450' => 'sun', 'Hund12053' => 'sun', 'Hund16800' => 'sun', 'Hund21222' => 'sun', 'Hund22896' => 'sun', 'Hund23746' => 'sun', 'Hund27083' => 'sun', 'Lalb_Chr02g0141831' => 'lal', 'Lalb_Chr02g0141841' => 'lal', 'Lalb_Chr05g0220411' => 'lal', 'Lalb_Chr06g0162081' => 'lal', 'Lalb_Chr09g0327651' => 'lal', 'Lalb_Chr13g0295051' => 'lal', 'Lalb_Chr15g0086801' => 'lal', 'Lalb_Chr16g0383781' => 'lal', 'Lalb_Chr16g0383791' => 'lal', 'Lalb_Chr18g0055441' => 'lal', 'Lalb_Chr18g0059611' => 'lal', 'Lalb_Chr20g0109661' => 'lal', 'Lalb_Chr20g0109831' => 'lal', 'Lalb_Chr20g0121871' => 'lal', 'Lalb_Chr22g0355361' => 'lal', 'Lalb_Chr25g0286371' => 'lal', 'Lj1A1187G43' => 'lonja', 'Lj1A1205T50' => 'lonja', 'Lj1A800G33' => 'lonja', 'Lj1C1187T7' => 'lonja', 'Lj1C843T11' => 'lonja', 'Lj1g0010940' => 'lja', 'Lj2A288T69' => 'lonja', 'Lj3g0024276' => 'lja', 'Lj4A47T76' => 'lonja', 'Lj4g0005805' => 'lja', 'Lj4g0006097' => 'lja', 'Lj4g0008528' => 'lja', 'Lj4g0024907' => 'lja', 'Lj5g0012472' => 'lja', 'Lj5g0018648' => 'lja', 'Lj6C789G1' => 'lonja', 'Lj6g0004000' => 'lja', 'Lj7A292G67' => 'lonja', 'Lj7A292T64' => 'lonja', 'Lj9A400T58' => 'lonja', 'Lsat_1_v5_gn_1_126181' => 'lsa', 'Lsat_1_v5_gn_4_123041' => 'lsa', 'Lsat_1_v5_gn_4_133620' => 'lsa', 'Lsat_1_v5_gn_4_53221' => 'lsa', 'Lsat_1_v5_gn_4_71961' => 'lsa', 'Lsat_1_v5_gn_7_105241' => 'lsa', 'Lsat_1_v5_gn_7_21361' => 'lsa', 'Lsat_1_v5_gn_7_28860' => 'lsa', 'Lsat_1_v5_gn_7_31260' => 'lsa', 'Lsat_1_v5_gn_8_52801' => 'lsa', 'Manes.02G191400' => 'mes', 'Manes.03G110100' => 'mes', 'Manes.04G071100' => 'mes', 'Manes.05G100500' => 'mes', 'Manes.05G164700' => 'mes', 'Manes.15G087000' => 'mes', 'Manes.15G121500' => 'mes', 'Manes.16G028300' => 'mes', 'Manes.17G046100' => 'mes', 'Manes.17G069800' => 'mes', 'Manes.18G100500' => 'mes', 'Mapoly0002s0109' => 'mpo', 'Mapoly0024s0007' => 'mpo', 'Mapoly0089s0032' => 'mpo', 'MBI04_g42241_MAGBIO' => 'mbi', 'MBI05_g11988_MAGBIO' => 'mbi', 'MBI05_g35452_MAGBIO' => 'mbi', 'MBI07_g30179_MAGBIO' => 'mbi', 'MBI07_g35859_MAGBIO' => 'mbi', 'MBI07_g35860_MAGBIO' => 'mbi', 'MBI07_g37166_MAGBIO' => 'mbi', 'MBI08_g18172_MAGBIO' => 'mbi', 'MBI09_g08441_MAGBIO' => 'mbi', 'MBI13_g01676_MAGBIO' => 'mbi', 'MBI14_g42955_MAGBIO' => 'mbi', 'MBI16_g13161_MAGBIO' => 'mbi', 'MBI17_g27204_MAGBIO' => 'mbi', 'MBI19_g21595_MAGBIO' => 'mbi', 'MD00G1148400' => 'mdo', 'MD02G1301200' => 'mdo', 'MD03G1227800' => 'mdo', 'MD05G1041100' => 'mdo', 'MD05G1124800' => 'mdo', 'MD05G1284000' => 'mdo', 'MD05G1338800' => 'mdo', 'MD05G1338900' => 'mdo', 'MD07G1022800' => 'mdo', 'MD10G1047500' => 'mdo', 'MD10G1127500' => 'mdo', 'MD10G1262300' => 'mdo', 'MD10G1293800' => 'mdo', 'MD16G1074300' => 'mdo', 'Medtr1g021670' => 'mtr', 'Medtr1g096320' => 'mtr', 'Medtr2g013690' => 'mtr', 'Medtr2g019450' => 'mtr', 'Medtr2g085170' => 'mtr', 'Medtr4g088785' => 'mtr', 'Medtr8g055930' => 'mtr', 'Medtr8g085850' => 'mtr', 'MELO3C002605.2' => 'cme', 'MELO3C003891.2' => 'cme', 'MELO3C004012.2' => 'cme', 'MELO3C007134.2' => 'cme', 'MELO3C008118.2' => 'cme', 'MELO3C016700.2' => 'cme', 'MELO3C024127.2' => 'cme', 'MELO3C033361.2' => 'cme', 'MELO3C033362.2' => 'cme', 'Migut.C00430' => 'egut', 'Migut.C01246' => 'egut', 'Migut.E00101' => 'egut', 'Migut.H01486' => 'egut', 'Migut.H01939' => 'egut', 'Migut.K00360' => 'egut', 'Migut.M00910' => 'egut', 'Migut.M01139' => 'egut', 'Migut.N02677' => 'egut', 'MSTRG.13252' => 'ama', 'MSTRG.14701' => 'ama', 'MSTRG.1521' => 'ama', 'MSTRG.15884' => 'ama', 'MSTRG.16242' => 'ama', 'MSTRG.22285' => 'ama', 'MSTRG.22444' => 'ama', 'MSTRG.2349' => 'ama', 'MSTRG.26308' => 'ama', 'MSTRG.28296' => 'ama', 'MSTRG.9895' => 'ama', 'Nitab4.5_0000110g0060' => 'nta', 'Nitab4.5_0000420g0130' => 'nta', 'Nitab4.5_0000422g0030' => 'nta', 'Nitab4.5_0000560g0180' => 'nta', 'Nitab4.5_0000703g0100' => 'nta', 'Nitab4.5_0000786g0200' => 'nta', 'Nitab4.5_0001336g0020' => 'nta', 'Nitab4.5_0001796g0030' => 'nta', 'Nitab4.5_0003348g0060' => 'nta', 'Nitab4.5_0003698g0040' => 'nta', 'Nitab4.5_0003942g0090' => 'nta', 'Nitab4.5_0004775g0070' => 'nta', 'Nitab4.5_0004864g0030' => 'nta', 'Nitab4.5_0005615g0020' => 'nta', 'Nitab4.5_0009288g0030' => 'nta', 'Nitab4.5_0009341g0010' => 'nta', 'Nitab4.5_0009535g0010' => 'nta', 'Nn1g03995' => 'nnu', 'Nn1g04100' => 'nnu', 'Nn1g06530' => 'nnu', 'Nn3g16404' => 'nnu', 'Nn3g17212' => 'nnu', 'Nn3g20776' => 'nnu', 'Nn3g21923' => 'nnu', 'Nn5g27737' => 'nnu', 'Nn5g29461' => 'nnu', 'Nn7g38355' => 'nnu', 'Nn8g39873' => 'nnu', 'Oeu000548.2' => 'oeu', 'Oeu004672.1' => 'oeu', 'Oeu015605.2' => 'oeu', 'Oeu016092.1' => 'oeu', 'Oeu017879.3' => 'oeu', 'Oeu024910.1' => 'oeu', 'Oeu028965.1' => 'oeu', 'Oeu031269.1' => 'oeu', 'Oeu031270.1' => 'oeu', 'Oeu032535.1' => 'oeu', 'Oeu034151.1' => 'oeu', 'Oeu034152.1' => 'oeu', 'Oeu034588.2' => 'oeu', 'Oeu050846.1' => 'oeu', 'Oeu050849.2' => 'oeu', 'Oeu051063.2' => 'oeu', 'Oeu052368.1' => 'oeu', 'Oeu052370.1' => 'oeu', 'Os01g0210400' => 'osa', 'Os01g0304300' => 'osa', 'Os01g0749100' => 'osa', 'Os02g0745800' => 'osa', 'Os03g0769050' => 'osa', 'Os05g0531500' => 'osa', 'Os06g0724300' => 'osa', 'Os11g0198100' => 'osa', 'Peaxi162Scf00069g01425' => 'pax', 'Peaxi162Scf00280g00811' => 'pax', 'Peaxi162Scf00310g00615' => 'pax', 'Peaxi162Scf00362g00542' => 'pax', 'Peaxi162Scf00461g00310' => 'pax', 'Peaxi162Scf00530g00118' => 'pax', 'Peaxi162Scf00541g00057' => 'pax', 'Peaxi162Scf00661g00017' => 'pax', 'Peaxi162Scf00926g00027' => 'pax', 'Peaxi162Scf01064g00263' => 'pax', 'Peaxi162Scf01211g00135' => 'pax', 'PGR004G2336' => 'pgr', 'PGR042G0327' => 'pgr', 'PGR042G1957' => 'pgr', 'PGR042G2003' => 'pgr', 'PGR042G3929' => 'pgr', 'PGR083G1137' => 'pgr', 'PGR083G1364' => 'pgr', 'PGSC0003DMG400003381' => 'stu', 'PGSC0003DMG400003417' => 'stu', 'PGSC0003DMG400008981' => 'stu', 'PGSC0003DMG400012417' => 'stu', 'PGSC0003DMG400012823' => 'stu', 'PGSC0003DMG400016885' => 'stu', 'PGSC0003DMG400022812' => 'stu', 'PGSC0003DMG400029726' => 'stu', 'PGSC0003DMG401009243' => 'stu', 'PGSC0003DMG401031505' => 'stu', 'PGSC0003DMG402031505' => 'stu', 'Phvul.001G017600' => 'pvu', 'Phvul.002G193500' => 'pvu', 'Phvul.002G228900' => 'pvu', 'Phvul.002G236800' => 'pvu', 'Phvul.003G049500' => 'pvu', 'Phvul.005G072000' => 'pvu', 'Phvul.006G164800' => 'pvu', 'Phvul.006G185100' => 'pvu', 'Phvul.007G090000' => 'pvu', 'Potri.001G399800' => 'ptr', 'Potri.002G149900' => 'ptr', 'Potri.004G044100' => 'ptr', 'Potri.004G177600' => 'ptr', 'Potri.009G138000' => 'ptr', 'Potri.010G094000' => 'ptr', 'Potri.011G053000' => 'ptr', 'Potri.011G119300' => 'ptr', 'Potri.013G113700' => 'ptr', 'Potri.018G107800' => 'ptr', 'Potri.019G084100' => 'ptr', 'Pp3c14_23720' => 'ppa', 'Pp3c16_6340' => 'ppa', 'Pp3c23_13420' => 'ppa', 'Pp3c24_2740' => 'ppa', 'Pp3c25_860' => 'ppa', 'Pp3c8_21750' => 'ppa', 'Prupe.1G273000' => 'ppe', 'Prupe.1G273700' => 'ppe', 'Prupe.1G274100' => 'ppe', 'Prupe.2G023300' => 'ppe', 'Prupe.4G048000' => 'ppe', 'Prupe.4G080400' => 'ppe', 'Prupe.4G181200' => 'ppe', 'Prupe.8G056900' => 'ppe', 'Prupe.8G168700' => 'ppe', 'Psat1g189080' => 'psa', 'Psat1g204760' => 'psa', 'Psat4g175560' => 'psa', 'Psat4g177720' => 'psa', 'Psat5g244240' => 'psa', 'Psat6g010720' => 'psa', 'Psat6g187200' => 'psa', 'Psat7g072040' => 'psa', 'PSO017G3501' => 'pso', 'PSO063G2148' => 'pso', 'PSO063G5608' => 'pso', 'PSO210G6392' => 'pso', 'PSO541G2319' => 'pso', 'PSO541G2836' => 'pso', 'PSO541G4012' => 'pso', 'PSO541G6253' => 'pso', 'PSO675G0580' => 'pso', 'PSO675G0856' => 'pso', 'PSO675G5635' => 'pso', 'PSO675G9157' => 'pso', 'PSO832G1660' => 'pso', 'PSO832G1969' => 'pso', 'QL02p007186' => 'qlo', 'QL02p033904' => 'qlo', 'QL03p064391' => 'qlo', 'QL05p040593' => 'qlo', 'QL05p058242' => 'qlo', 'QL08p021825' => 'qlo', 'QL11p004981' => 'qlo', 'RcHm_v2.0_Chr1g0318301' => 'rch', 'RcHm_v2.0_Chr4g0418501' => 'rch', 'RcHm_v2.0_Chr4g0439971' => 'rch', 'RcHm_v2.0_Chr5g0008541' => 'rch', 'RcHm_v2.0_Chr5g0014101' => 'rch', 'RcHm_v2.0_Chr5g0014131' => 'rch', 'RcHm_v2.0_Chr5g0033621' => 'rch', 'RcHm_v2.0_Chr6g0272041' => 'rch', 'RcHm_v2.0_Chr6g0278831' => 'rch', 'Rhsim02G0130400' => 'rsi', 'Rhsim02G0171100' => 'rsi', 'Rhsim05G0053000' => 'rsi', 'Rhsim05G0053100' => 'rsi', 'Rhsim06G0096500' => 'rsi', 'Rhsim06G0096600' => 'rsi', 'Rhsim06G0199100' => 'rsi', 'Rhsim12G0062300' => 'rsi', 'Rhsim12G0062800' => 'rsi', 'Sabra02G0118600' => 'sbr', 'Sabra04G0027300' => 'sbr', 'Sabra04G0119500' => 'sbr', 'Sabra08G0112500' => 'sbr', 'Sabra11G0036800' => 'sbr', 'Sabra11G0103800' => 'sbr', 'Sabra13G0096300' => 'sbr', 'Sabra16G0262300' => 'sbr', 'Sabra18G0091700' => 'sbr', 'Sabra19G0095400' => 'sbr', 'SalBow6G3080' => 'sbo', 'SalBow7G1157' => 'sbo', 'SalBow7G2123' => 'sbo', 'SalBow7G2285' => 'sbo', 'SalBow7G3537' => 'sbo', 'SalBow8G2947' => 'sbo', 'SalBow8G4463' => 'sbo', 'SalBow8G5466' => 'sbo', 'Sc01g0001750' => 'sci', 'Sc02g0006640' => 'sci', 'Sc02g0006670' => 'sci', 'Sc04g0008220' => 'sci', 'Sc05g0006190' => 'sci', 'Sc08g0002760' => 'sci', 'Sc17g0006170' => 'sci', 'Sc22g0002050' => 'sci', 'Sc23g0001190' => 'sci', 'Sc24g0000980' => 'sci', 'Sed0006245' => 'sed', 'Sed0007543' => 'sed', 'Sed0009411' => 'sed', 'Sed0010765' => 'sed', 'Sed0012944' => 'sed', 'Sed0014682' => 'sed', 'Sed0016174' => 'sed', 'Sed0016796' => 'sed', 'Sed0020317' => 'sed', 'Sed0021467' => 'sed', 'SEGI_01316' => 'sgi', 'SEGI_03374' => 'sgi', 'SEGI_16265' => 'sgi', 'SEGI_18569' => 'sgi', 'SEGI_20351' => 'sgi', 'SEGI_26395' => 'sgi', 'SEGI_29469' => 'sgi', 'SEGI_34771' => 'sgi', 'SEGI_36769' => 'sgi', 'SEGI_37139' => 'sgi', 'SGA_v2.0_scaffold100G29687' => 'sas', 'SGA_v2.0_scaffold118G32472' => 'sas', 'SGA_v2.0_scaffold14G07051' => 'sas', 'SGA_v2.0_scaffold183G39845' => 'sas', 'SGA_v2.0_scaffold1G00174' => 'sas', 'SGA_v2.0_scaffold22G09714' => 'sas', 'SGA_v2.0_scaffold333G48992' => 'sas', 'SGA_v2.0_scaffold46G17491' => 'sas', 'SGA_v2.0_scaffold49G18294' => 'sas', 'SGA_v2.0_scaffold63G21658' => 'sas', 'SHI01741' => 'shi', 'SHI05771' => 'shi', 'SHI18077' => 'shi', 'SHI20525' => 'shi', 'SHI20527' => 'shi', 'SHI20528' => 'shi', 'SMO172G0185' => 'smo', 'SMO198G0020' => 'smo', 'SMO351G0006' => 'smo', 'SMO356G0118' => 'smo', 'SMO358G0296' => 'smo', 'SMO367G0079' => 'smo', 'SMO367G1277' => 'smo', 'Solyc01g014220.3' => 'sly', 'Solyc01g111770.2' => 'sly', 'Solyc02g078180.3' => 'sly', 'Solyc03g006430.3' => 'sly', 'Solyc03g006456.1' => 'sly', 'Solyc03g079860.2' => 'sly', 'Solyc04g079770.3' => 'sly', 'Solyc05g007430.4' => 'sly', 'Solyc07g063150.3' => 'sly', 'Solyc08g016620.3' => 'sly', 'Solyc09g057590.3' => 'sly', 'Solyc09g057600.1' => 'sly', 'Solyc10g009050.3' => 'sly', 'Solyc11g017420.2' => 'sly', 'Sopen01g053810' => 'spe', 'Sopen02g023040' => 'spe', 'Sopen03g002440' => 'spe', 'Sopen04g033350' => 'spe', 'Sopen05g003310' => 'spe', 'Sopen07g004050' => 'spe', 'Sopen07g031340' => 'spe', 'Sopen08g006990' => 'spe', 'Sopen10g004830' => 'spe', 'Sopen11g009370' => 'spe', 'Sp1g24450' => 'spa', 'Sp1g29670' => 'spa', 'Sp1g39600' => 'spa', 'Sp2g11080' => 'spa', 'Sp2g13970' => 'spa', 'Sp4g16130' => 'spa', 'Sp6g13080' => 'spa', 'Sp7g37270' => 'spa', 'TAR371G0065' => 'tar', 'TAR376G0340' => 'tar', 'TAR376G0435' => 'tar', 'TAR381G0002' => 'tar', 'TAR381G1236' => 'tar', 'TAR624G0055' => 'tar', 'TAR624G0324' => 'tar', 'TAR624G0696' => 'tar', 'TAR624G0906' => 'tar', 'TAR625G0107' => 'tar', 'TAR626G0015' => 'tar', 'TAR626G1356' => 'tar', 'TAR627G0888' => 'tar', 'TAR628G0399' => 'tar', 'TAR628G1327' => 'tar', 'TAR629G2831' => 'tar', 'TAR629G2874' => 'tar', 'TAR633G1432' => 'tar', 'TAR633G2771' => 'tar', 'THA.LOC104803394' => 'tha', 'THA.LOC104805153' => 'tha', 'THA.LOC104806784' => 'tha', 'THA.LOC104810473' => 'tha', 'THA.LOC104813100' => 'tha', 'THA.LOC104814215' => 'tha', 'THA.LOC104815554' => 'tha', 'THA.LOC104820544' => 'tha', 'THA.LOC104824754' => 'tha', 'THA.LOC104827717' => 'tha', 'Thecc.02G031400' => 'tca', 'Thecc.02G055900' => 'tca', 'Thecc.02G350800' => 'tca', 'Thecc.06G150900' => 'tca', 'Thecc.06G186600' => 'tca', 'Thecc.07G089600' => 'tca', 'Thecc.08G020400' => 'tca', 'Thecc.08G182100' => 'tca', 'Thhalv10000873m.g' => 'esa', 'Thhalv10004185m.g' => 'esa', 'Thhalv10006981m.g' => 'esa', 'Thhalv10007204m.g' => 'esa', 'Thhalv10011374m.g' => 'esa', 'Thhalv10013482m.g' => 'esa', 'Thhalv10017801m.g' => 'esa', 'Thhalv10024983m.g' => 'esa', 'TPR.G12072' => 'tpr', 'TPR.G15769' => 'tpr', 'TPR.G16504' => 'tpr', 'TPR.G16506' => 'tpr', 'TPR.G24345' => 'tpr', 'TPR.G26666' => 'tpr', 'TPR.G27320' => 'tpr', 'TPR.G31819' => 'tpr', 'TPR.G38879' => 'tpr', 'TPR.G39015' => 'tpr', 'TPR.G8819' => 'tpr', 'TWI09G0924' => 'twi', 'TWI12G0811' => 'twi', 'TWI12G1294' => 'twi', 'TWI31G0150' => 'twi', 'TWI36G1262' => 'twi', 'TWI38G1287' => 'twi', 'TWI38G1633' => 'twi', 'TWI38G1982' => 'twi', 'TWI39G0116' => 'twi', 'TWI60G1011' => 'twi', 'TWI63G0171' => 'twi', 'TWI73G0839' => 'twi', 'TWI79G1511' => 'twi', 'unitig_0.g915' => 'ugi', 'unitig_0.g916' => 'ugi', 'unitig_21.g20219' => 'ugi', 'unitig_21.g20416' => 'ugi', 'unitig_578.g16132' => 'ugi', 'unitig_578.g16718' => 'ugi', 'unitig_62.g23481' => 'ugi', 'unitig_744.g24535' => 'ugi', 'unitig_749.g13525' => 'ugi', 'vmacro01248' => 'vma', 'vmacro02290' => 'vma', 'vmacro10946' => 'vma', 'vmacro11865' => 'vma', 'vmacro12493' => 'vma', 'vmacro17322' => 'vma', 'vmacro21599' => 'vma', 'vmacro23041' => 'vma', 'VMungo0251G0004' => 'vmu', 'VMungo0251G2639' => 'vmu', 'VMungo0251G2967' => 'vmu', 'VMungo0540G0864' => 'vmu', 'VMungo0540G1569' => 'vmu', 'VMungo0647G0317' => 'vmu', 'VMungo0720G1373' => 'vmu', 'VMungo0720G1508' => 'vmu', 'VMungo1080G0485' => 'vmu', 'VMungo1215G3177' => 'vmu', 'Zm00001eb112600' => 'zma', 'Zm00001eb120220' => 'zma', 'Zm00001eb153240' => 'zma', 'Zm00001eb168880' => 'zma', 'Zm00001eb213920' => 'zma', 'Zm00001eb228280' => 'zma', 'Zm00001eb254580' => 'zma', 'Zm00001eb272180' => 'zma', 'Zm00001eb293190' => 'zma', 'Zm00001eb322930' => 'zma', 'Zm00001eb353360' => 'zma', 'Zm00001eb353390' => 'zma', 'Zm00001eb353430' => 'zma', 'Zm00001eb353440' => 'zma', 'Zm00001eb353780' => 'zma' ) $gf_id = 'HOM05D000499' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000499' ) $data_identifier = 'HOM05D000499' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 29, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 12, 'amhyb' => (int) 8, 'aly' => (int) 12, 'aox' => (int) 9, 'arhy' => (int) 26, 'ath' => (int) 8, 'atr' => (int) 7, 'acertr' => (int) 10, 'cqu' => (int) 15, 'bca' => (int) 29, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 11, 'cansat' => (int) 8, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 9, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 8, 'cpa' => (int) 10, 'csa' => (int) 7, 'camsi' => (int) 20, 'dca' => (int) 8, 'din' => (int) 12, 'dzi' => (int) 14, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 6, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 38, 'gra' => (int) 16, 'vvi' => (int) 8, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 5, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 11, 'lja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 11, 'mpo' => (int) 3, 'mbi' => (int) 14, 'mdo' => (int) 14, 'mtr' => (int) 8, 'cme' => (int) 9, 'egut' => (int) 9, 'ama' => (int) 11, 'nta' => (int) 17, 'nnu' => (int) 11, 'oeu' => (int) 18, 'osa' => (int) 8, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 6, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 9, 'rsi' => (int) 9, 'sbr' => (int) 10, 'sbo' => (int) 8, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 10, 'sas' => (int) 10, 'shi' => (int) 6, 'smo' => (int) 7, 'sly' => (int) 14, 'spe' => (int) 10, 'spa' => (int) 8, 'tar' => (int) 19, 'tha' => (int) 10, 'tca' => (int) 8, 'esa' => (int) 8, 'tpr' => (int) 11, 'twi' => (int) 13, 'ugi' => (int) 9, 'vma' => (int) 8, 'vmu' => (int) 10, 'zma' => (int) 15 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb353780' $species_info = array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ) $local_species = 'spa' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000499', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1066', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p29780' => 'bna', 'A02p33180' => 'bna', 'A03p16470' => 'bna', 'A03p66010' => 'bna', 'A04p25970' => 'bna', 'A06p01270' => 'bna', 'A06p46080' => 'bna', 'A07p11400' => 'bna', 'A08p01840' => 'bna', 'A08p08230' => 'bna', 'A08p25740' => 'bna', 'A09p32070' => 'bna', 'A09p37830' => 'bna', 'A09p42840' => 'bna', 'A09p42850' => 'bna', 'Aa31LG10G2060' => 'aar', 'Aa31LG2G7410' => 'aar', 'Aa31LG6G10200' => 'aar', 'Aa31LG6G16680' => 'aar', 'Aa31LG6G8470' => 'aar', 'Aa31LG9G12730' => 'aar', 'Aa31LG9G13680' => 'aar', 'Aa31LG9G14920' => 'aar', 'Aa31LG9G6650' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4977' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5467' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3254' => 'aag', 'Actinidia02578' => 'ach', 'Actinidia07693' => 'ach', 'Actinidia08413' => 'ach', 'Actinidia08414' => 'ach', 'Actinidia15289' => 'ach', 'Actinidia19871' => 'ach', 'Actinidia21475' => 'ach', 'Actinidia22576' => 'ach', 'Actinidia28327' => 'ach', 'Actinidia32491' => 'ach', 'Actinidia39463' => 'ach', 'Actinidia39571' => 'ach', 'Ah.01g013750' => 'amhyb', 'Ah.01g023210' => 'amhyb', 'Ah.04g164850' => 'amhyb', 'Ah.05g178060' => 'amhyb', 'Ah.07g204270' => 'amhyb', 'Ah.07g208480' => 'amhyb', 'Ah.09g237410' => 'amhyb', 'Ah.14g089460' => 'amhyb', 'AL1G41790' => 'aly', 'AL1G49050' => 'aly', 'AL1G53810' => 'aly', 'AL1G61400' => 'aly', 'AL4G18580' => 'aly', 'AL5G12510' => 'aly', 'AL5G12540' => 'aly', 'AL6G43230' => 'aly', 'AL7G10370' => 'aly', 'AL7G19250' => 'aly', 'AL8G12240' => 'aly', 'AL8G18540' => 'aly', 'Aqoxy1G02409' => 'aox', 'Aqoxy2G03993' => 'aox', 'Aqoxy3G03357' => 'aox', 'Aqoxy4G00785' => 'aox', 'Aqoxy5G02598' => 'aox', 'Aqoxy6G00132' => 'aox', 'Aqoxy7G01776' => 'aox', 'Aqoxy7G02316' => 'aox', 'Aqoxy7G03973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.12AFKW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B8730' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27IQR1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3F75VG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3RE0GA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41TCQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.527VTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FIR39' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5W8UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DA38EV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ63HS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H1I32C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HC27T5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4M8AP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7N3CZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9UVDZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LS1NQA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT1D4B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SKC4TM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCFV76' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF9Q1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQWD9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1ZM88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WE07RT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YCK7VH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJE6Q6' => 'arhy', 'AT1G28240' => 'ath', 'AT1G34550' => 'ath', 'AT1G53040' => 'ath', 'AT2G02910' => 'ath', 'AT4G09630' => 'ath', 'AT4G38500' => 'ath', 'AT5G42660' => 'ath', 'AT5G46220' => 'ath', 'ATR0152G026' => 'atr', 'ATR0564G343' => 'atr', 'ATR0706G151' => 'atr', 'ATR0733G207' => 'atr', 'ATR0751G234' => 'atr', 'ATR0807G048' => 'atr', 'ATR1091G084' => 'atr', 'Atru.chr10.1229' => 'acertr', 'Atru.chr10.1230' => 'acertr', 'Atru.chr10.1874' => 'acertr', 'Atru.chr11.1808' => 'acertr', 'Atru.chr13.1795' => 'acertr', 'Atru.chr13.570' => 'acertr', 'Atru.chr2.2608' => 'acertr', 'Atru.chr2.2609' => 'acertr', 'Atru.chr5.3428' => 'acertr', 'Atru.chr8.1171' => 'acertr', 'AUR62004651' => 'cqu', 'AUR62008675' => 'cqu', 'AUR62010014' => 'cqu', 'AUR62013004' => 'cqu', 'AUR62014825' => 'cqu', 'AUR62015015' => 'cqu', 'AUR62015151' => 'cqu', 'AUR62017020' => 'cqu', 'AUR62019422' => 'cqu', 'AUR62023570' => 'cqu', 'AUR62025571' => 'cqu', 'AUR62029098' => 'cqu', 'AUR62033863' => 'cqu', 'AUR62034296' => 'cqu', 'AUR62040075' => 'cqu', 'BcaB02g07334' => 'bca', 'BcaB02g10575' => 'bca', 'BcaB03g12119' => 'bca', 'BcaB03g12120' => 'bca', 'BcaB03g13945' => 'bca', 'BcaB04g17123' => 'bca', 'BcaB04g17867' => 'bca', 'BcaB04g19839' => 'bca', 'BcaB07g30317' => 'bca', 'BcaB07g32432' => 'bca', 'BcaB07g33362' => 'bca', 'BcaB08g36611' => 'bca', 'BcaC01g00028' => 'bca', 'BcaC01g01356' => 'bca', 'BcaC01g02034' => 'bca', 'BcaC01g06051' => 'bca', 'BcaC03g16839' => 'bca', 'BcaC03g17176' => 'bca', 'BcaC05g26829' => 'bca', 'BcaC06g31490' => 'bca', 'BcaC06g35344' => 'bca', 'BcaC06g36570' => 'bca', 'BcaC07g37537' => 'bca', 'BcaC08g43491' => 'bca', 'BcaC08g43773' => 'bca', 'BcaNung00234' => 'bca', 'BcaNung01982' => 'bca', 'BcaNung03707' => 'bca', 'BcaNung06454' => 'bca', 'BolC2t10762H' => 'bol', 'BolC2t11191H' => 'bol', 'BolC3t14322H' => 'bol', 'BolC3t19747H' => 'bol', 'BolC3t21425H' => 'bol', 'BolC4t27800H' => 'bol', 'BolC5t31423H' => 'bol', 'BolC6t35951H' => 'bol', 'BolC6t36282H' => 'bol', 'BolC7t40678H' => 'bol', 'BolC7t40679H' => 'bol', 'BolC7t42222H' => 'bol', 'BolC7t43492H' => 'bol', 'BolC7t46785H' => 'bol', 'BolC8t47853H' => 'bol', 'BolC9t56805H' => 'bol', 'BraA02t08000Z' => 'bra', 'BraA02t08341Z' => 'bra', 'BraA03t10936Z' => 'bra', 'BraA03t15657Z' => 'bra', 'BraA04t18100Z' => 'bra', 'BraA05t20523Z' => 'bra', 'BraA06t23353Z' => 'bra', 'BraA06t27473Z' => 'bra', 'BraA06t27769Z' => 'bra', 'BraA07t28928Z' => 'bra', 'BraA08t32236Z' => 'bra', 'BraA08t32841Z' => 'bra', 'BraA08t34524Z' => 'bra', 'BraA09t38742Z' => 'bra', 'BraA09t39295Z' => 'bra', 'C02p47180' => 'bna', 'C02p50990' => 'bna', 'C03p19360' => 'bna', 'C03p74950' => 'bna', 'C03p91000' => 'bna', 'C04p63260' => 'bna', 'C05p27050' => 'bna', 'C06p08750' => 'bna', 'C06p11490' => 'bna', 'C07p02820' => 'bna', 'C07p17180' => 'bna', 'C07p29440' => 'bna', 'C07p63730' => 'bna', 'C09p39260' => 'bna', 'CAN.G1164.34' => 'can', 'CAN.G1164.39' => 'can', 'CAN.G1530.3' => 'can', 'CAN.G162.61' => 'can', 'CAN.G176.6' => 'can', 'CAN.G289.49' => 'can', 'CAN.G370.21' => 'can', 'CAN.G370.22' => 'can', 'CAN.G371.117' => 'can', 'CAN.G58.37' => 'can', 'CAN.G588.98' => 'can', 'CANSAT21G2266' => 'cansat', 'CANSAT25G2799' => 'cansat', 'CANSAT35G0862' => 'cansat', 'CANSAT35G1704' => 'cansat', 'CANSAT35G1760' => 'cansat', 'CANSAT56G3971' => 'cansat', 'CANSAT56G4116' => 'cansat', 'CANSAT80G1259' => 'cansat', 'CARHR027730' => 'chi', 'CARHR033880' => 'chi', 'CARHR043270' => 'chi', 'CARHR145330' => 'chi', 'CARHR145340' => 'chi', 'CARHR175570' => 'chi', 'CARHR181570' => 'chi', 'CARHR258470' => 'chi', 'CARHR260490' => 'chi', 'CARHR294220' => 'chi', 'Carub.0001s2668' => 'cru', 'Carub.0001s3257' => 'cru', 'Carub.0001s4220' => 'cru', 'Carub.0005s0179' => 'cru', 'Carub.0006s2807' => 'cru', 'Carub.0007s0039' => 'cru', 'Carub.0008s0169' => 'cru', 'Carub.0008s0636' => 'cru', 'Ca_00338_v3' => 'car', 'Ca_00542_v3' => 'car', 'Ca_01844_v3' => 'car', 'Ca_10611_v3' => 'car', 'Ca_13326_v3' => 'car', 'Ca_17944_v3' => 'car', 'Ca_18546_v3' => 'car', 'Ca_24219_v3' => 'car', 'Ca_29972_v3' => 'car', 'CBR_g3681' => 'cbr', 'CBR_g40021' => 'cbr', 'Cc01_g08140' => 'ccan', 'Cc02_g13410' => 'ccan', 'Cc02_g37480' => 'ccan', 'Cc05_g12030' => 'ccan', 'Cc09_g03370' => 'ccan', 'Cc09_g10300' => 'ccan', 'Cc10_g03530' => 'ccan', 'Cc10_g11380' => 'ccan', 'CDE01G0176' => 'cde', 'CDE02G0675' => 'cde', 'CDE02G0942' => 'cde', 'CDE02G1153' => 'cde', 'CDE02G4177' => 'cde', 'CDE04G2117' => 'cde', 'CDE04G2736' => 'cde', 'CDE08G1161' => 'cde', 'CDE09G1238' => 'cde', 'Cfa000467' => 'cfa', 'Cfa000947' => 'cfa', 'Cfa004969' => 'cfa', 'Cfa005284' => 'cfa', 'Cfa008993' => 'cfa', 'Cfa018187' => 'cfa', 'Cfa018454' => 'cfa', 'Cfa020585' => 'cfa', 'Ciclev10000424m.g' => 'ccl', 'Ciclev10003605m.g' => 'ccl', 'Ciclev10007828m.g' => 'ccl', 'Ciclev10014620m.g' => 'ccl', 'Ciclev10015169m.g' => 'ccl', 'Ciclev10018291m.g' => 'ccl', 'Ciclev10028256m.g' => 'ccl', 'Ciclev10033822m.g' => 'ccl', 'CiPaw.05G060300' => 'cil', 'CiPaw.05G085000' => 'cil', 'CiPaw.06G083700' => 'cil', 'CiPaw.06G120300' => 'cil', 'CiPaw.09G060500' => 'cil', 'CiPaw.09G123800' => 'cil', 'CiPaw.11G169700' => 'cil', 'CiPaw.12G118300' => 'cil', 'CiPaw.15G071000' => 'cil', 'CiPaw.15G081900' => 'cil', 'ClCG01G024610' => 'cla', 'ClCG03G006070' => 'cla', 'ClCG05G019250' => 'cla', 'ClCG09G009500' => 'cla', 'ClCG11G008200' => 'cla', 'ClCG11G018080' => 'cla', 'COL.COLO4_17373' => 'col', 'COL.COLO4_22994' => 'col', 'COL.COLO4_26389' => 'col', 'COL.COLO4_27170' => 'col', 'COL.COLO4_31074' => 'col', 'COL.COLO4_31465' => 'col', 'COL.COLO4_36438' => 'col', 'COL.COLO4_36439' => 'col', 'Cpa.g.c38781' => 'cpa', 'Cpa.g.sc128.12' => 'cpa', 'Cpa.g.sc166.7' => 'cpa', 'Cpa.g.sc166.8' => 'cpa', 'Cpa.g.sc20.111' => 'cpa', 'Cpa.g.sc27.31' => 'cpa', 'Cpa.g.sc64.36' => 'cpa', 'Cpa.g.sc64.37' => 'cpa', 'Cpa.g.sc66.49' => 'cpa', 'Cpa.g.sc80.64' => 'cpa', 'CsaV3_1G012320' => 'csa', 'CsaV3_2G008480' => 'csa', 'CsaV3_2G033450' => 'csa', 'CsaV3_3G044830' => 'csa', 'CsaV3_4G033710' => 'csa', 'CsaV3_6G051730' => 'csa', 'CsaV3_7G025350' => 'csa', 'CSS0001067' => 'camsi', 'CSS0005996' => 'camsi', 'CSS0006590' => 'camsi', 'CSS0009673' => 'camsi', 'CSS0010201' => 'camsi', 'CSS0010549' => 'camsi', 'CSS0011364' => 'camsi', 'CSS0014473' => 'camsi', 'CSS0014961' => 'camsi', 'CSS0020191' => 'camsi', 'CSS0021165' => 'camsi', 'CSS0022306' => 'camsi', 'CSS0030591' => 'camsi', 'CSS0030696' => 'camsi', 'CSS0032653' => 'camsi', 'CSS0037487' => 'camsi', 'CSS0041102' => 'camsi', 'CSS0041261' => 'camsi', 'CSS0046246' => 'camsi', 'CSS0049256' => 'camsi', 'DCAR_004075' => 'dca', 'DCAR_011538' => 'dca', 'DCAR_019553' => 'dca', 'DCAR_020952' => 'dca', 'DCAR_021739' => 'dca', 'DCAR_027407' => 'dca', 'DCAR_027913' => 'dca', 'DCAR_028066' => 'dca', 'Dinv05899' => 'din', 'Dinv07563' => 'din', 'Dinv08010' => 'din', 'Dinv14125' => 'din', 'Dinv20172' => 'din', 'Dinv30743' => 'din', 'Dinv31229' => 'din', 'Dinv34162' => 'din', 'Dinv36028' => 'din', 'Dinv39368' => 'din', 'Dinv40565' => 'din', 'Dinv41706' => 'din', 'Duzib052G0089' => 'dzi', 'Duzib116G0641' => 'dzi', 'Duzib132G0069' => 'dzi', 'Duzib132G1219' => 'dzi', 'Duzib147G0278' => 'dzi', 'Duzib160G0480' => 'dzi', 'Duzib170G0661' => 'dzi', 'Duzib177G0591' => 'dzi', 'Duzib187G1353' => 'dzi', 'Duzib192G0858' => 'dzi', 'Duzib192G0883' => 'dzi', 'Duzib213G0506' => 'dzi', 'Duzib235G0289' => 'dzi', 'Duzib251G0422' => 'dzi', 'ECA232G3898' => 'eca', 'ECA233G5950' => 'eca', 'ECA234G1699' => 'eca', 'ECA234G2421' => 'eca', 'ECA236G0426' => 'eca', 'ECA236G4331' => 'eca', 'ECA248G2573' => 'eca', 'EL10Ac1g00077' => 'bvu', 'EL10Ac1g01746' => 'bvu', 'EL10Ac2g03464' => 'bvu', 'EL10Ac4g08176' => 'bvu', 'EL10Ac7g17521' => 'bvu', 'EL10Ac8g20386' => 'bvu', 'EL10Ac9g21343' => 'bvu', 'EL10Ac9g22688' => 'bvu', 'Eucgr.B03434' => 'egr', 'Eucgr.D00618' => 'egr', 'Eucgr.E02395' => 'egr', 'Eucgr.F01129' => 'egr', 'Eucgr.F02622' => 'egr', 'Eucgr.F04207' => 'egr', 'FAN01G0570' => 'fan', 'FAN03G3351' => 'fan', 'FAN06G3702' => 'fan', 'FAN07G2149' => 'fan', 'FAN10G3758' => 'fan', 'FAN11G1170' => 'fan', 'FAN11G2050' => 'fan', 'FAN11G2724' => 'fan', 'FAN12G1700' => 'fan', 'FAN12G2028' => 'fan', 'FAN15G1160' => 'fan', 'FAN15G3063' => 'fan', 'FAN16G2540' => 'fan', 'FAN16G3077' => 'fan', 'FAN16G3624' => 'fan', 'FAN17G0221' => 'fan', 'FAN20G2492' => 'fan', 'FAN20G2905' => 'fan', 'FAN21G0548' => 'fan', 'FAN21G1300' => 'fan', 'FAN22G0077' => 'fan', 'FAN22G1315' => 'fan', 'FAN24G1280' => 'fan', 'FAN24G1445' => 'fan', 'FAN24G3527' => 'fan', 'FAN25G0464' => 'fan', 'FAN25G2885' => 'fan', 'FAN25G3270' => 'fan', 'FAN27G1101' => 'fan', 'FAN27G2846' => 'fan', 'FAN27G3524' => 'fan', 'FvH4_2g11770' => 'fve', 'FvH4_2g15630' => 'fve', 'FvH4_3g05570' => 'fve', 'FvH4_3g09110' => 'fve', 'FvH4_3g19940' => 'fve', 'FvH4_4g04821' => 'fve', 'FvH4_4g31480' => 'fve', 'FvH4_7g01740' => 'fve', 'Glyma.05G130400' => 'gma', 'Glyma.05G156400' => 'gma', 'Glyma.07G197000' => 'gma', 'Glyma.08G085151' => 'gma', 'Glyma.08G114500' => 'gma', 'Glyma.08G300400' => 'gma', 'Glyma.10G215800' => 'gma', 'Glyma.12G224400' => 'gma', 'Glyma.13G179300' => 'gma', 'Glyma.13G218151' => 'gma', 'Glyma.13G238800' => 'gma', 'Glyma.13G276900' => 'gma', 'Glyma.14G078200' => 'gma', 'Glyma.15G074500' => 'gma', 'Glyma.15G094100' => 'gma', 'Glyma.17G247200' => 'gma', 'Glyma.18G120100' => 'gma', 'Glyma.20G176000' => 'gma', 'Gohir.A01G063600' => 'ghi', 'Gohir.A01G170301' => 'ghi', 'Gohir.A02G060500' => 'ghi', 'Gohir.A05G133850' => 'ghi', 'Gohir.A05G161400' => 'ghi', 'Gohir.A06G012900' => 'ghi', 'Gohir.A06G035901' => 'ghi', 'Gohir.A06G127100' => 'ghi', 'Gohir.A06G210500' => 'ghi', 'Gohir.A08G008650' => 'ghi', 'Gohir.A09G072700' => 'ghi', 'Gohir.A09G088301' => 'ghi', 'Gohir.A10G040600' => 'ghi', 'Gohir.A12G036300' => 'ghi', 'Gohir.A12G143350' => 'ghi', 'Gohir.A12G165500' => 'ghi', 'Gohir.A13G145700' => 'ghi', 'Gohir.D01G050000' => 'ghi', 'Gohir.D01G051366' => 'ghi', 'Gohir.D01G161350' => 'ghi', 'Gohir.D02G065900' => 'ghi', 'Gohir.D05G164200' => 'ghi', 'Gohir.D05G355500' => 'ghi', 'Gohir.D06G010400' => 'ghi', 'Gohir.D06G111250' => 'ghi', 'Gohir.D06G132000' => 'ghi', 'Gohir.D06G210500' => 'ghi', 'Gohir.D07G165675' => 'ghi', 'Gohir.D08G062240' => 'ghi', 'Gohir.D08G086101' => 'ghi', 'Gohir.D08G138060' => 'ghi', 'Gohir.D09G072300' => 'ghi', 'Gohir.D10G041400' => 'ghi', 'Gohir.D11G191020' => 'ghi', 'Gohir.D11G212066' => 'ghi', 'Gohir.D12G036300' => 'ghi', 'Gohir.D12G168600' => 'ghi', 'Gohir.D13G150600' => 'ghi', 'Gorai.001G057300' => 'gra', 'Gorai.002G069900' => 'gra', 'Gorai.002G200000' => 'gra', 'Gorai.003G067600' => 'gra', 'Gorai.005G074800' => 'gra', 'Gorai.006G087300' => 'gra', 'Gorai.008G037500' => 'gra', 'Gorai.008G181400' => 'gra', 'Gorai.009G169400' => 'gra', 'Gorai.009G387900' => 'gra', 'Gorai.010G013300' => 'gra', 'Gorai.010G153800' => 'gra', 'Gorai.010G255800' => 'gra', 'Gorai.011G043700' => 'gra', 'Gorai.011G198900' => 'gra', 'Gorai.013G168400' => 'gra', 'GSVIVG01005212001' => 'vvi', 'GSVIVG01006163001' => 'vvi', 'GSVIVG01009625001' => 'vvi', 'GSVIVG01014338001' => 'vvi', 'GSVIVG01020005001' => 'vvi', 'GSVIVG01021450001' => 'vvi', 'GSVIVG01023975001' => 'vvi', 'GSVIVG01034490001' => 'vvi', 'HanXRQChr04g0112071' => 'han', 'HanXRQChr05g0131151' => 'han', 'HanXRQChr09g0262371' => 'han', 'HanXRQChr09g0268401' => 'han', 'HanXRQChr10g0279241' => 'han', 'HanXRQChr10g0297961' => 'han', 'HanXRQChr11g0326231' => 'han', 'HanXRQChr11g0328471' => 'han', 'HanXRQChr16g0507941' => 'han', 'HanXRQChr17g0560211' => 'han', 'Haze_02108' => 'cav', 'Haze_02428' => 'cav', 'Haze_05593' => 'cav', 'Haze_06448' => 'cav', 'Haze_09427' => 'cav', 'Haze_12022' => 'cav', 'Haze_17612' => 'cav', 'Haze_17928' => 'cav', 'Hma1.2p1_0032F.1_g019250' => 'hma', 'Hma1.2p1_0163F.1_g072690' => 'hma', 'Hma1.2p1_0265F.1_g106710' => 'hma', 'Hma1.2p1_0286F.1_g113970' => 'hma', 'Hma1.2p1_0363F.1_g136640' => 'hma', 'Hma1.2p1_0584F.1_g183470' => 'hma', 'Hma1.2p1_0885F.1_g232570' => 'hma', 'HPP92_006022' => 'vpl', 'HPP92_007320' => 'vpl', 'HPP92_011521' => 'vpl', 'HPP92_019387' => 'vpl', 'HPP92_024038' => 'vpl', 'Hund05891' => 'sun', 'Hund06450' => 'sun', 'Hund12053' => 'sun', 'Hund16800' => 'sun', 'Hund21222' => 'sun', 'Hund22896' => 'sun', 'Hund23746' => 'sun', 'Hund27083' => 'sun', 'Lalb_Chr02g0141831' => 'lal', 'Lalb_Chr02g0141841' => 'lal', 'Lalb_Chr05g0220411' => 'lal', 'Lalb_Chr06g0162081' => 'lal', 'Lalb_Chr09g0327651' => 'lal', 'Lalb_Chr13g0295051' => 'lal', 'Lalb_Chr15g0086801' => 'lal', 'Lalb_Chr16g0383781' => 'lal', 'Lalb_Chr16g0383791' => 'lal', 'Lalb_Chr18g0055441' => 'lal', 'Lalb_Chr18g0059611' => 'lal', 'Lalb_Chr20g0109661' => 'lal', 'Lalb_Chr20g0109831' => 'lal', 'Lalb_Chr20g0121871' => 'lal', 'Lalb_Chr22g0355361' => 'lal', 'Lalb_Chr25g0286371' => 'lal', 'Lj1A1187G43' => 'lonja', 'Lj1A1205T50' => 'lonja', 'Lj1A800G33' => 'lonja', 'Lj1C1187T7' => 'lonja', 'Lj1C843T11' => 'lonja', 'Lj1g0010940' => 'lja', 'Lj2A288T69' => 'lonja', 'Lj3g0024276' => 'lja', 'Lj4A47T76' => 'lonja', 'Lj4g0005805' => 'lja', 'Lj4g0006097' => 'lja', 'Lj4g0008528' => 'lja', 'Lj4g0024907' => 'lja', 'Lj5g0012472' => 'lja', 'Lj5g0018648' => 'lja', 'Lj6C789G1' => 'lonja', 'Lj6g0004000' => 'lja', 'Lj7A292G67' => 'lonja', 'Lj7A292T64' => 'lonja', 'Lj9A400T58' => 'lonja', 'Lsat_1_v5_gn_1_126181' => 'lsa', 'Lsat_1_v5_gn_4_123041' => 'lsa', 'Lsat_1_v5_gn_4_133620' => 'lsa', 'Lsat_1_v5_gn_4_53221' => 'lsa', 'Lsat_1_v5_gn_4_71961' => 'lsa', 'Lsat_1_v5_gn_7_105241' => 'lsa', 'Lsat_1_v5_gn_7_21361' => 'lsa', 'Lsat_1_v5_gn_7_28860' => 'lsa', 'Lsat_1_v5_gn_7_31260' => 'lsa', 'Lsat_1_v5_gn_8_52801' => 'lsa', 'Manes.02G191400' => 'mes', 'Manes.03G110100' => 'mes', 'Manes.04G071100' => 'mes', 'Manes.05G100500' => 'mes', 'Manes.05G164700' => 'mes', 'Manes.15G087000' => 'mes', 'Manes.15G121500' => 'mes', 'Manes.16G028300' => 'mes', 'Manes.17G046100' => 'mes', 'Manes.17G069800' => 'mes', 'Manes.18G100500' => 'mes', 'Mapoly0002s0109' => 'mpo', 'Mapoly0024s0007' => 'mpo', 'Mapoly0089s0032' => 'mpo', 'MBI04_g42241_MAGBIO' => 'mbi', 'MBI05_g11988_MAGBIO' => 'mbi', 'MBI05_g35452_MAGBIO' => 'mbi', 'MBI07_g30179_MAGBIO' => 'mbi', 'MBI07_g35859_MAGBIO' => 'mbi', 'MBI07_g35860_MAGBIO' => 'mbi', 'MBI07_g37166_MAGBIO' => 'mbi', 'MBI08_g18172_MAGBIO' => 'mbi', 'MBI09_g08441_MAGBIO' => 'mbi', 'MBI13_g01676_MAGBIO' => 'mbi', 'MBI14_g42955_MAGBIO' => 'mbi', 'MBI16_g13161_MAGBIO' => 'mbi', 'MBI17_g27204_MAGBIO' => 'mbi', 'MBI19_g21595_MAGBIO' => 'mbi', 'MD00G1148400' => 'mdo', 'MD02G1301200' => 'mdo', 'MD03G1227800' => 'mdo', 'MD05G1041100' => 'mdo', 'MD05G1124800' => 'mdo', 'MD05G1284000' => 'mdo', 'MD05G1338800' => 'mdo', 'MD05G1338900' => 'mdo', 'MD07G1022800' => 'mdo', 'MD10G1047500' => 'mdo', 'MD10G1127500' => 'mdo', 'MD10G1262300' => 'mdo', 'MD10G1293800' => 'mdo', 'MD16G1074300' => 'mdo', 'Medtr1g021670' => 'mtr', 'Medtr1g096320' => 'mtr', 'Medtr2g013690' => 'mtr', 'Medtr2g019450' => 'mtr', 'Medtr2g085170' => 'mtr', 'Medtr4g088785' => 'mtr', 'Medtr8g055930' => 'mtr', 'Medtr8g085850' => 'mtr', 'MELO3C002605.2' => 'cme', 'MELO3C003891.2' => 'cme', 'MELO3C004012.2' => 'cme', 'MELO3C007134.2' => 'cme', 'MELO3C008118.2' => 'cme', 'MELO3C016700.2' => 'cme', 'MELO3C024127.2' => 'cme', 'MELO3C033361.2' => 'cme', 'MELO3C033362.2' => 'cme', 'Migut.C00430' => 'egut', 'Migut.C01246' => 'egut', 'Migut.E00101' => 'egut', 'Migut.H01486' => 'egut', 'Migut.H01939' => 'egut', 'Migut.K00360' => 'egut', 'Migut.M00910' => 'egut', 'Migut.M01139' => 'egut', 'Migut.N02677' => 'egut', 'MSTRG.13252' => 'ama', 'MSTRG.14701' => 'ama', 'MSTRG.1521' => 'ama', 'MSTRG.15884' => 'ama', 'MSTRG.16242' => 'ama', 'MSTRG.22285' => 'ama', 'MSTRG.22444' => 'ama', 'MSTRG.2349' => 'ama', 'MSTRG.26308' => 'ama', 'MSTRG.28296' => 'ama', 'MSTRG.9895' => 'ama', 'Nitab4.5_0000110g0060' => 'nta', 'Nitab4.5_0000420g0130' => 'nta', 'Nitab4.5_0000422g0030' => 'nta', 'Nitab4.5_0000560g0180' => 'nta', 'Nitab4.5_0000703g0100' => 'nta', 'Nitab4.5_0000786g0200' => 'nta', 'Nitab4.5_0001336g0020' => 'nta', 'Nitab4.5_0001796g0030' => 'nta', 'Nitab4.5_0003348g0060' => 'nta', 'Nitab4.5_0003698g0040' => 'nta', 'Nitab4.5_0003942g0090' => 'nta', 'Nitab4.5_0004775g0070' => 'nta', 'Nitab4.5_0004864g0030' => 'nta', 'Nitab4.5_0005615g0020' => 'nta', 'Nitab4.5_0009288g0030' => 'nta', 'Nitab4.5_0009341g0010' => 'nta', 'Nitab4.5_0009535g0010' => 'nta', 'Nn1g03995' => 'nnu', 'Nn1g04100' => 'nnu', 'Nn1g06530' => 'nnu', 'Nn3g16404' => 'nnu', 'Nn3g17212' => 'nnu', 'Nn3g20776' => 'nnu', 'Nn3g21923' => 'nnu', 'Nn5g27737' => 'nnu', 'Nn5g29461' => 'nnu', 'Nn7g38355' => 'nnu', 'Nn8g39873' => 'nnu', 'Oeu000548.2' => 'oeu', 'Oeu004672.1' => 'oeu', 'Oeu015605.2' => 'oeu', 'Oeu016092.1' => 'oeu', 'Oeu017879.3' => 'oeu', 'Oeu024910.1' => 'oeu', 'Oeu028965.1' => 'oeu', 'Oeu031269.1' => 'oeu', 'Oeu031270.1' => 'oeu', 'Oeu032535.1' => 'oeu', 'Oeu034151.1' => 'oeu', 'Oeu034152.1' => 'oeu', 'Oeu034588.2' => 'oeu', 'Oeu050846.1' => 'oeu', 'Oeu050849.2' => 'oeu', 'Oeu051063.2' => 'oeu', 'Oeu052368.1' => 'oeu', 'Oeu052370.1' => 'oeu', 'Os01g0210400' => 'osa', 'Os01g0304300' => 'osa', 'Os01g0749100' => 'osa', 'Os02g0745800' => 'osa', 'Os03g0769050' => 'osa', 'Os05g0531500' => 'osa', 'Os06g0724300' => 'osa', 'Os11g0198100' => 'osa', 'Peaxi162Scf00069g01425' => 'pax', 'Peaxi162Scf00280g00811' => 'pax', 'Peaxi162Scf00310g00615' => 'pax', 'Peaxi162Scf00362g00542' => 'pax', 'Peaxi162Scf00461g00310' => 'pax', 'Peaxi162Scf00530g00118' => 'pax', 'Peaxi162Scf00541g00057' => 'pax', 'Peaxi162Scf00661g00017' => 'pax', 'Peaxi162Scf00926g00027' => 'pax', 'Peaxi162Scf01064g00263' => 'pax', 'Peaxi162Scf01211g00135' => 'pax', 'PGR004G2336' => 'pgr', 'PGR042G0327' => 'pgr', 'PGR042G1957' => 'pgr', 'PGR042G2003' => 'pgr', 'PGR042G3929' => 'pgr', 'PGR083G1137' => 'pgr', 'PGR083G1364' => 'pgr', 'PGSC0003DMG400003381' => 'stu', 'PGSC0003DMG400003417' => 'stu', 'PGSC0003DMG400008981' => 'stu', 'PGSC0003DMG400012417' => 'stu', 'PGSC0003DMG400012823' => 'stu', 'PGSC0003DMG400016885' => 'stu', 'PGSC0003DMG400022812' => 'stu', 'PGSC0003DMG400029726' => 'stu', 'PGSC0003DMG401009243' => 'stu', 'PGSC0003DMG401031505' => 'stu', 'PGSC0003DMG402031505' => 'stu', 'Phvul.001G017600' => 'pvu', 'Phvul.002G193500' => 'pvu', 'Phvul.002G228900' => 'pvu', 'Phvul.002G236800' => 'pvu', 'Phvul.003G049500' => 'pvu', 'Phvul.005G072000' => 'pvu', 'Phvul.006G164800' => 'pvu', 'Phvul.006G185100' => 'pvu', 'Phvul.007G090000' => 'pvu', 'Potri.001G399800' => 'ptr', 'Potri.002G149900' => 'ptr', 'Potri.004G044100' => 'ptr', 'Potri.004G177600' => 'ptr', 'Potri.009G138000' => 'ptr', 'Potri.010G094000' => 'ptr', 'Potri.011G053000' => 'ptr', 'Potri.011G119300' => 'ptr', 'Potri.013G113700' => 'ptr', 'Potri.018G107800' => 'ptr', 'Potri.019G084100' => 'ptr', 'Pp3c14_23720' => 'ppa', 'Pp3c16_6340' => 'ppa', 'Pp3c23_13420' => 'ppa', 'Pp3c24_2740' => 'ppa', 'Pp3c25_860' => 'ppa', 'Pp3c8_21750' => 'ppa', 'Prupe.1G273000' => 'ppe', 'Prupe.1G273700' => 'ppe', 'Prupe.1G274100' => 'ppe', 'Prupe.2G023300' => 'ppe', 'Prupe.4G048000' => 'ppe', 'Prupe.4G080400' => 'ppe', 'Prupe.4G181200' => 'ppe', 'Prupe.8G056900' => 'ppe', 'Prupe.8G168700' => 'ppe', 'Psat1g189080' => 'psa', 'Psat1g204760' => 'psa', 'Psat4g175560' => 'psa', 'Psat4g177720' => 'psa', 'Psat5g244240' => 'psa', 'Psat6g010720' => 'psa', 'Psat6g187200' => 'psa', 'Psat7g072040' => 'psa', 'PSO017G3501' => 'pso', 'PSO063G2148' => 'pso', 'PSO063G5608' => 'pso', 'PSO210G6392' => 'pso', 'PSO541G2319' => 'pso', 'PSO541G2836' => 'pso', 'PSO541G4012' => 'pso', 'PSO541G6253' => 'pso', 'PSO675G0580' => 'pso', 'PSO675G0856' => 'pso', 'PSO675G5635' => 'pso', 'PSO675G9157' => 'pso', 'PSO832G1660' => 'pso', 'PSO832G1969' => 'pso', 'QL02p007186' => 'qlo', 'QL02p033904' => 'qlo', 'QL03p064391' => 'qlo', 'QL05p040593' => 'qlo', 'QL05p058242' => 'qlo', 'QL08p021825' => 'qlo', 'QL11p004981' => 'qlo', 'RcHm_v2.0_Chr1g0318301' => 'rch', 'RcHm_v2.0_Chr4g0418501' => 'rch', 'RcHm_v2.0_Chr4g0439971' => 'rch', 'RcHm_v2.0_Chr5g0008541' => 'rch', 'RcHm_v2.0_Chr5g0014101' => 'rch', 'RcHm_v2.0_Chr5g0014131' => 'rch', 'RcHm_v2.0_Chr5g0033621' => 'rch', 'RcHm_v2.0_Chr6g0272041' => 'rch', 'RcHm_v2.0_Chr6g0278831' => 'rch', 'Rhsim02G0130400' => 'rsi', 'Rhsim02G0171100' => 'rsi', 'Rhsim05G0053000' => 'rsi', 'Rhsim05G0053100' => 'rsi', 'Rhsim06G0096500' => 'rsi', 'Rhsim06G0096600' => 'rsi', 'Rhsim06G0199100' => 'rsi', 'Rhsim12G0062300' => 'rsi', 'Rhsim12G0062800' => 'rsi', 'Sabra02G0118600' => 'sbr', 'Sabra04G0027300' => 'sbr', 'Sabra04G0119500' => 'sbr', 'Sabra08G0112500' => 'sbr', 'Sabra11G0036800' => 'sbr', 'Sabra11G0103800' => 'sbr', 'Sabra13G0096300' => 'sbr', 'Sabra16G0262300' => 'sbr', 'Sabra18G0091700' => 'sbr', 'Sabra19G0095400' => 'sbr', 'SalBow6G3080' => 'sbo', 'SalBow7G1157' => 'sbo', 'SalBow7G2123' => 'sbo', 'SalBow7G2285' => 'sbo', 'SalBow7G3537' => 'sbo', 'SalBow8G2947' => 'sbo', 'SalBow8G4463' => 'sbo', 'SalBow8G5466' => 'sbo', 'Sc01g0001750' => 'sci', 'Sc02g0006640' => 'sci', 'Sc02g0006670' => 'sci', 'Sc04g0008220' => 'sci', 'Sc05g0006190' => 'sci', 'Sc08g0002760' => 'sci', 'Sc17g0006170' => 'sci', 'Sc22g0002050' => 'sci', 'Sc23g0001190' => 'sci', 'Sc24g0000980' => 'sci', 'Sed0006245' => 'sed', 'Sed0007543' => 'sed', 'Sed0009411' => 'sed', 'Sed0010765' => 'sed', 'Sed0012944' => 'sed', 'Sed0014682' => 'sed', 'Sed0016174' => 'sed', 'Sed0016796' => 'sed', 'Sed0020317' => 'sed', 'Sed0021467' => 'sed', 'SEGI_01316' => 'sgi', 'SEGI_03374' => 'sgi', 'SEGI_16265' => 'sgi', 'SEGI_18569' => 'sgi', 'SEGI_20351' => 'sgi', 'SEGI_26395' => 'sgi', 'SEGI_29469' => 'sgi', 'SEGI_34771' => 'sgi', 'SEGI_36769' => 'sgi', 'SEGI_37139' => 'sgi', 'SGA_v2.0_scaffold100G29687' => 'sas', 'SGA_v2.0_scaffold118G32472' => 'sas', 'SGA_v2.0_scaffold14G07051' => 'sas', 'SGA_v2.0_scaffold183G39845' => 'sas', 'SGA_v2.0_scaffold1G00174' => 'sas', 'SGA_v2.0_scaffold22G09714' => 'sas', 'SGA_v2.0_scaffold333G48992' => 'sas', 'SGA_v2.0_scaffold46G17491' => 'sas', 'SGA_v2.0_scaffold49G18294' => 'sas', 'SGA_v2.0_scaffold63G21658' => 'sas', 'SHI01741' => 'shi', 'SHI05771' => 'shi', 'SHI18077' => 'shi', 'SHI20525' => 'shi', 'SHI20527' => 'shi', 'SHI20528' => 'shi', 'SMO172G0185' => 'smo', 'SMO198G0020' => 'smo', 'SMO351G0006' => 'smo', 'SMO356G0118' => 'smo', 'SMO358G0296' => 'smo', 'SMO367G0079' => 'smo', 'SMO367G1277' => 'smo', 'Solyc01g014220.3' => 'sly', 'Solyc01g111770.2' => 'sly', 'Solyc02g078180.3' => 'sly', 'Solyc03g006430.3' => 'sly', 'Solyc03g006456.1' => 'sly', 'Solyc03g079860.2' => 'sly', 'Solyc04g079770.3' => 'sly', 'Solyc05g007430.4' => 'sly', 'Solyc07g063150.3' => 'sly', 'Solyc08g016620.3' => 'sly', 'Solyc09g057590.3' => 'sly', 'Solyc09g057600.1' => 'sly', 'Solyc10g009050.3' => 'sly', 'Solyc11g017420.2' => 'sly', 'Sopen01g053810' => 'spe', 'Sopen02g023040' => 'spe', 'Sopen03g002440' => 'spe', 'Sopen04g033350' => 'spe', 'Sopen05g003310' => 'spe', 'Sopen07g004050' => 'spe', 'Sopen07g031340' => 'spe', 'Sopen08g006990' => 'spe', 'Sopen10g004830' => 'spe', 'Sopen11g009370' => 'spe', 'Sp1g24450' => 'spa', 'Sp1g29670' => 'spa', 'Sp1g39600' => 'spa', 'Sp2g11080' => 'spa', 'Sp2g13970' => 'spa', 'Sp4g16130' => 'spa', 'Sp6g13080' => 'spa', 'Sp7g37270' => 'spa', 'TAR371G0065' => 'tar', 'TAR376G0340' => 'tar', 'TAR376G0435' => 'tar', 'TAR381G0002' => 'tar', 'TAR381G1236' => 'tar', 'TAR624G0055' => 'tar', 'TAR624G0324' => 'tar', 'TAR624G0696' => 'tar', 'TAR624G0906' => 'tar', 'TAR625G0107' => 'tar', 'TAR626G0015' => 'tar', 'TAR626G1356' => 'tar', 'TAR627G0888' => 'tar', 'TAR628G0399' => 'tar', 'TAR628G1327' => 'tar', 'TAR629G2831' => 'tar', 'TAR629G2874' => 'tar', 'TAR633G1432' => 'tar', 'TAR633G2771' => 'tar', 'THA.LOC104803394' => 'tha', 'THA.LOC104805153' => 'tha', 'THA.LOC104806784' => 'tha', 'THA.LOC104810473' => 'tha', 'THA.LOC104813100' => 'tha', 'THA.LOC104814215' => 'tha', 'THA.LOC104815554' => 'tha', 'THA.LOC104820544' => 'tha', 'THA.LOC104824754' => 'tha', 'THA.LOC104827717' => 'tha', 'Thecc.02G031400' => 'tca', 'Thecc.02G055900' => 'tca', 'Thecc.02G350800' => 'tca', 'Thecc.06G150900' => 'tca', 'Thecc.06G186600' => 'tca', 'Thecc.07G089600' => 'tca', 'Thecc.08G020400' => 'tca', 'Thecc.08G182100' => 'tca', 'Thhalv10000873m.g' => 'esa', 'Thhalv10004185m.g' => 'esa', 'Thhalv10006981m.g' => 'esa', 'Thhalv10007204m.g' => 'esa', 'Thhalv10011374m.g' => 'esa', 'Thhalv10013482m.g' => 'esa', 'Thhalv10017801m.g' => 'esa', 'Thhalv10024983m.g' => 'esa', 'TPR.G12072' => 'tpr', 'TPR.G15769' => 'tpr', 'TPR.G16504' => 'tpr', 'TPR.G16506' => 'tpr', 'TPR.G24345' => 'tpr', 'TPR.G26666' => 'tpr', 'TPR.G27320' => 'tpr', 'TPR.G31819' => 'tpr', 'TPR.G38879' => 'tpr', 'TPR.G39015' => 'tpr', 'TPR.G8819' => 'tpr', 'TWI09G0924' => 'twi', 'TWI12G0811' => 'twi', 'TWI12G1294' => 'twi', 'TWI31G0150' => 'twi', 'TWI36G1262' => 'twi', 'TWI38G1287' => 'twi', 'TWI38G1633' => 'twi', 'TWI38G1982' => 'twi', 'TWI39G0116' => 'twi', 'TWI60G1011' => 'twi', 'TWI63G0171' => 'twi', 'TWI73G0839' => 'twi', 'TWI79G1511' => 'twi', 'unitig_0.g915' => 'ugi', 'unitig_0.g916' => 'ugi', 'unitig_21.g20219' => 'ugi', 'unitig_21.g20416' => 'ugi', 'unitig_578.g16132' => 'ugi', 'unitig_578.g16718' => 'ugi', 'unitig_62.g23481' => 'ugi', 'unitig_744.g24535' => 'ugi', 'unitig_749.g13525' => 'ugi', 'vmacro01248' => 'vma', 'vmacro02290' => 'vma', 'vmacro10946' => 'vma', 'vmacro11865' => 'vma', 'vmacro12493' => 'vma', 'vmacro17322' => 'vma', 'vmacro21599' => 'vma', 'vmacro23041' => 'vma', 'VMungo0251G0004' => 'vmu', 'VMungo0251G2639' => 'vmu', 'VMungo0251G2967' => 'vmu', 'VMungo0540G0864' => 'vmu', 'VMungo0540G1569' => 'vmu', 'VMungo0647G0317' => 'vmu', 'VMungo0720G1373' => 'vmu', 'VMungo0720G1508' => 'vmu', 'VMungo1080G0485' => 'vmu', 'VMungo1215G3177' => 'vmu', 'Zm00001eb112600' => 'zma', 'Zm00001eb120220' => 'zma', 'Zm00001eb153240' => 'zma', 'Zm00001eb168880' => 'zma', 'Zm00001eb213920' => 'zma', 'Zm00001eb228280' => 'zma', 'Zm00001eb254580' => 'zma', 'Zm00001eb272180' => 'zma', 'Zm00001eb293190' => 'zma', 'Zm00001eb322930' => 'zma', 'Zm00001eb353360' => 'zma', 'Zm00001eb353390' => 'zma', 'Zm00001eb353430' => 'zma', 'Zm00001eb353440' => 'zma', 'Zm00001eb353780' => 'zma' ), 'gf_id' => 'HOM05D000499', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000499' ), 'data_identifier' => 'HOM05D000499', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000499', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1066', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p29780' => 'bna', 'A02p33180' => 'bna', 'A03p16470' => 'bna', 'A03p66010' => 'bna', 'A04p25970' => 'bna', 'A06p01270' => 'bna', 'A06p46080' => 'bna', 'A07p11400' => 'bna', 'A08p01840' => 'bna', 'A08p08230' => 'bna', 'A08p25740' => 'bna', 'A09p32070' => 'bna', 'A09p37830' => 'bna', 'A09p42840' => 'bna', 'A09p42850' => 'bna', 'Aa31LG10G2060' => 'aar', 'Aa31LG2G7410' => 'aar', 'Aa31LG6G10200' => 'aar', 'Aa31LG6G16680' => 'aar', 'Aa31LG6G8470' => 'aar', 'Aa31LG9G12730' => 'aar', 'Aa31LG9G13680' => 'aar', 'Aa31LG9G14920' => 'aar', 'Aa31LG9G6650' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4977' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5467' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3254' => 'aag', 'Actinidia02578' => 'ach', 'Actinidia07693' => 'ach', 'Actinidia08413' => 'ach', 'Actinidia08414' => 'ach', 'Actinidia15289' => 'ach', 'Actinidia19871' => 'ach', 'Actinidia21475' => 'ach', 'Actinidia22576' => 'ach', 'Actinidia28327' => 'ach', 'Actinidia32491' => 'ach', 'Actinidia39463' => 'ach', 'Actinidia39571' => 'ach', 'Ah.01g013750' => 'amhyb', 'Ah.01g023210' => 'amhyb', 'Ah.04g164850' => 'amhyb', 'Ah.05g178060' => 'amhyb', 'Ah.07g204270' => 'amhyb', 'Ah.07g208480' => 'amhyb', 'Ah.09g237410' => 'amhyb', 'Ah.14g089460' => 'amhyb', 'AL1G41790' => 'aly', 'AL1G49050' => 'aly', 'AL1G53810' => 'aly', 'AL1G61400' => 'aly', 'AL4G18580' => 'aly', 'AL5G12510' => 'aly', 'AL5G12540' => 'aly', 'AL6G43230' => 'aly', 'AL7G10370' => 'aly', 'AL7G19250' => 'aly', 'AL8G12240' => 'aly', 'AL8G18540' => 'aly', 'Aqoxy1G02409' => 'aox', 'Aqoxy2G03993' => 'aox', 'Aqoxy3G03357' => 'aox', 'Aqoxy4G00785' => 'aox', 'Aqoxy5G02598' => 'aox', 'Aqoxy6G00132' => 'aox', 'Aqoxy7G01776' => 'aox', 'Aqoxy7G02316' => 'aox', 'Aqoxy7G03973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.12AFKW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B8730' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27IQR1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3F75VG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3RE0GA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41TCQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.527VTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FIR39' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5W8UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DA38EV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ63HS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H1I32C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HC27T5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4M8AP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7N3CZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9UVDZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LS1NQA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT1D4B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SKC4TM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCFV76' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF9Q1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQWD9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1ZM88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WE07RT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YCK7VH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJE6Q6' => 'arhy', 'AT1G28240' => 'ath', 'AT1G34550' => 'ath', 'AT1G53040' => 'ath', 'AT2G02910' => 'ath', 'AT4G09630' => 'ath', 'AT4G38500' => 'ath', 'AT5G42660' => 'ath', 'AT5G46220' => 'ath', 'ATR0152G026' => 'atr', 'ATR0564G343' => 'atr', 'ATR0706G151' => 'atr', 'ATR0733G207' => 'atr', 'ATR0751G234' => 'atr', 'ATR0807G048' => 'atr', 'ATR1091G084' => 'atr', 'Atru.chr10.1229' => 'acertr', 'Atru.chr10.1230' => 'acertr', 'Atru.chr10.1874' => 'acertr', 'Atru.chr11.1808' => 'acertr', 'Atru.chr13.1795' => 'acertr', 'Atru.chr13.570' => 'acertr', 'Atru.chr2.2608' => 'acertr', 'Atru.chr2.2609' => 'acertr', 'Atru.chr5.3428' => 'acertr', 'Atru.chr8.1171' => 'acertr', 'AUR62004651' => 'cqu', 'AUR62008675' => 'cqu', 'AUR62010014' => 'cqu', 'AUR62013004' => 'cqu', 'AUR62014825' => 'cqu', 'AUR62015015' => 'cqu', 'AUR62015151' => 'cqu', 'AUR62017020' => 'cqu', 'AUR62019422' => 'cqu', 'AUR62023570' => 'cqu', 'AUR62025571' => 'cqu', 'AUR62029098' => 'cqu', 'AUR62033863' => 'cqu', 'AUR62034296' => 'cqu', 'AUR62040075' => 'cqu', 'BcaB02g07334' => 'bca', 'BcaB02g10575' => 'bca', 'BcaB03g12119' => 'bca', 'BcaB03g12120' => 'bca', 'BcaB03g13945' => 'bca', 'BcaB04g17123' => 'bca', 'BcaB04g17867' => 'bca', 'BcaB04g19839' => 'bca', 'BcaB07g30317' => 'bca', 'BcaB07g32432' => 'bca', 'BcaB07g33362' => 'bca', 'BcaB08g36611' => 'bca', 'BcaC01g00028' => 'bca', 'BcaC01g01356' => 'bca', 'BcaC01g02034' => 'bca', 'BcaC01g06051' => 'bca', 'BcaC03g16839' => 'bca', 'BcaC03g17176' => 'bca', 'BcaC05g26829' => 'bca', 'BcaC06g31490' => 'bca', 'BcaC06g35344' => 'bca', 'BcaC06g36570' => 'bca', 'BcaC07g37537' => 'bca', 'BcaC08g43491' => 'bca', 'BcaC08g43773' => 'bca', 'BcaNung00234' => 'bca', 'BcaNung01982' => 'bca', 'BcaNung03707' => 'bca', 'BcaNung06454' => 'bca', 'BolC2t10762H' => 'bol', 'BolC2t11191H' => 'bol', 'BolC3t14322H' => 'bol', 'BolC3t19747H' => 'bol', 'BolC3t21425H' => 'bol', 'BolC4t27800H' => 'bol', 'BolC5t31423H' => 'bol', 'BolC6t35951H' => 'bol', 'BolC6t36282H' => 'bol', 'BolC7t40678H' => 'bol', 'BolC7t40679H' => 'bol', 'BolC7t42222H' => 'bol', 'BolC7t43492H' => 'bol', 'BolC7t46785H' => 'bol', 'BolC8t47853H' => 'bol', 'BolC9t56805H' => 'bol', 'BraA02t08000Z' => 'bra', 'BraA02t08341Z' => 'bra', 'BraA03t10936Z' => 'bra', 'BraA03t15657Z' => 'bra', 'BraA04t18100Z' => 'bra', 'BraA05t20523Z' => 'bra', 'BraA06t23353Z' => 'bra', 'BraA06t27473Z' => 'bra', 'BraA06t27769Z' => 'bra', 'BraA07t28928Z' => 'bra', 'BraA08t32236Z' => 'bra', 'BraA08t32841Z' => 'bra', 'BraA08t34524Z' => 'bra', 'BraA09t38742Z' => 'bra', 'BraA09t39295Z' => 'bra', 'C02p47180' => 'bna', 'C02p50990' => 'bna', 'C03p19360' => 'bna', 'C03p74950' => 'bna', 'C03p91000' => 'bna', 'C04p63260' => 'bna', 'C05p27050' => 'bna', 'C06p08750' => 'bna', 'C06p11490' => 'bna', 'C07p02820' => 'bna', 'C07p17180' => 'bna', 'C07p29440' => 'bna', 'C07p63730' => 'bna', 'C09p39260' => 'bna', 'CAN.G1164.34' => 'can', 'CAN.G1164.39' => 'can', 'CAN.G1530.3' => 'can', 'CAN.G162.61' => 'can', 'CAN.G176.6' => 'can', 'CAN.G289.49' => 'can', 'CAN.G370.21' => 'can', 'CAN.G370.22' => 'can', 'CAN.G371.117' => 'can', 'CAN.G58.37' => 'can', 'CAN.G588.98' => 'can', 'CANSAT21G2266' => 'cansat', 'CANSAT25G2799' => 'cansat', 'CANSAT35G0862' => 'cansat', 'CANSAT35G1704' => 'cansat', 'CANSAT35G1760' => 'cansat', 'CANSAT56G3971' => 'cansat', 'CANSAT56G4116' => 'cansat', 'CANSAT80G1259' => 'cansat', 'CARHR027730' => 'chi', 'CARHR033880' => 'chi', 'CARHR043270' => 'chi', 'CARHR145330' => 'chi', 'CARHR145340' => 'chi', 'CARHR175570' => 'chi', 'CARHR181570' => 'chi', 'CARHR258470' => 'chi', 'CARHR260490' => 'chi', 'CARHR294220' => 'chi', 'Carub.0001s2668' => 'cru', 'Carub.0001s3257' => 'cru', 'Carub.0001s4220' => 'cru', 'Carub.0005s0179' => 'cru', 'Carub.0006s2807' => 'cru', 'Carub.0007s0039' => 'cru', 'Carub.0008s0169' => 'cru', 'Carub.0008s0636' => 'cru', 'Ca_00338_v3' => 'car', 'Ca_00542_v3' => 'car', 'Ca_01844_v3' => 'car', 'Ca_10611_v3' => 'car', 'Ca_13326_v3' => 'car', 'Ca_17944_v3' => 'car', 'Ca_18546_v3' => 'car', 'Ca_24219_v3' => 'car', 'Ca_29972_v3' => 'car', 'CBR_g3681' => 'cbr', 'CBR_g40021' => 'cbr', 'Cc01_g08140' => 'ccan', 'Cc02_g13410' => 'ccan', 'Cc02_g37480' => 'ccan', 'Cc05_g12030' => 'ccan', 'Cc09_g03370' => 'ccan', 'Cc09_g10300' => 'ccan', 'Cc10_g03530' => 'ccan', 'Cc10_g11380' => 'ccan', 'CDE01G0176' => 'cde', 'CDE02G0675' => 'cde', 'CDE02G0942' => 'cde', 'CDE02G1153' => 'cde', 'CDE02G4177' => 'cde', 'CDE04G2117' => 'cde', 'CDE04G2736' => 'cde', 'CDE08G1161' => 'cde', 'CDE09G1238' => 'cde', 'Cfa000467' => 'cfa', 'Cfa000947' => 'cfa', 'Cfa004969' => 'cfa', 'Cfa005284' => 'cfa', 'Cfa008993' => 'cfa', 'Cfa018187' => 'cfa', 'Cfa018454' => 'cfa', 'Cfa020585' => 'cfa', 'Ciclev10000424m.g' => 'ccl', 'Ciclev10003605m.g' => 'ccl', 'Ciclev10007828m.g' => 'ccl', 'Ciclev10014620m.g' => 'ccl', 'Ciclev10015169m.g' => 'ccl', 'Ciclev10018291m.g' => 'ccl', 'Ciclev10028256m.g' => 'ccl', 'Ciclev10033822m.g' => 'ccl', 'CiPaw.05G060300' => 'cil', 'CiPaw.05G085000' => 'cil', 'CiPaw.06G083700' => 'cil', 'CiPaw.06G120300' => 'cil', 'CiPaw.09G060500' => 'cil', 'CiPaw.09G123800' => 'cil', 'CiPaw.11G169700' => 'cil', 'CiPaw.12G118300' => 'cil', 'CiPaw.15G071000' => 'cil', 'CiPaw.15G081900' => 'cil', 'ClCG01G024610' => 'cla', 'ClCG03G006070' => 'cla', 'ClCG05G019250' => 'cla', 'ClCG09G009500' => 'cla', 'ClCG11G008200' => 'cla', 'ClCG11G018080' => 'cla', 'COL.COLO4_17373' => 'col', 'COL.COLO4_22994' => 'col', 'COL.COLO4_26389' => 'col', 'COL.COLO4_27170' => 'col', 'COL.COLO4_31074' => 'col', 'COL.COLO4_31465' => 'col', 'COL.COLO4_36438' => 'col', 'COL.COLO4_36439' => 'col', 'Cpa.g.c38781' => 'cpa', 'Cpa.g.sc128.12' => 'cpa', 'Cpa.g.sc166.7' => 'cpa', 'Cpa.g.sc166.8' => 'cpa', 'Cpa.g.sc20.111' => 'cpa', 'Cpa.g.sc27.31' => 'cpa', 'Cpa.g.sc64.36' => 'cpa', 'Cpa.g.sc64.37' => 'cpa', 'Cpa.g.sc66.49' => 'cpa', 'Cpa.g.sc80.64' => 'cpa', 'CsaV3_1G012320' => 'csa', 'CsaV3_2G008480' => 'csa', 'CsaV3_2G033450' => 'csa', 'CsaV3_3G044830' => 'csa', 'CsaV3_4G033710' => 'csa', 'CsaV3_6G051730' => 'csa', 'CsaV3_7G025350' => 'csa', 'CSS0001067' => 'camsi', 'CSS0005996' => 'camsi', 'CSS0006590' => 'camsi', 'CSS0009673' => 'camsi', 'CSS0010201' => 'camsi', 'CSS0010549' => 'camsi', 'CSS0011364' => 'camsi', 'CSS0014473' => 'camsi', 'CSS0014961' => 'camsi', 'CSS0020191' => 'camsi', 'CSS0021165' => 'camsi', 'CSS0022306' => 'camsi', 'CSS0030591' => 'camsi', 'CSS0030696' => 'camsi', 'CSS0032653' => 'camsi', 'CSS0037487' => 'camsi', 'CSS0041102' => 'camsi', 'CSS0041261' => 'camsi', 'CSS0046246' => 'camsi', 'CSS0049256' => 'camsi', 'DCAR_004075' => 'dca', 'DCAR_011538' => 'dca', 'DCAR_019553' => 'dca', 'DCAR_020952' => 'dca', 'DCAR_021739' => 'dca', 'DCAR_027407' => 'dca', 'DCAR_027913' => 'dca', 'DCAR_028066' => 'dca', 'Dinv05899' => 'din', 'Dinv07563' => 'din', 'Dinv08010' => 'din', 'Dinv14125' => 'din', 'Dinv20172' => 'din', 'Dinv30743' => 'din', 'Dinv31229' => 'din', 'Dinv34162' => 'din', 'Dinv36028' => 'din', 'Dinv39368' => 'din', 'Dinv40565' => 'din', 'Dinv41706' => 'din', 'Duzib052G0089' => 'dzi', 'Duzib116G0641' => 'dzi', 'Duzib132G0069' => 'dzi', 'Duzib132G1219' => 'dzi', 'Duzib147G0278' => 'dzi', 'Duzib160G0480' => 'dzi', 'Duzib170G0661' => 'dzi', 'Duzib177G0591' => 'dzi', 'Duzib187G1353' => 'dzi', 'Duzib192G0858' => 'dzi', 'Duzib192G0883' => 'dzi', 'Duzib213G0506' => 'dzi', 'Duzib235G0289' => 'dzi', 'Duzib251G0422' => 'dzi', 'ECA232G3898' => 'eca', 'ECA233G5950' => 'eca', 'ECA234G1699' => 'eca', 'ECA234G2421' => 'eca', 'ECA236G0426' => 'eca', 'ECA236G4331' => 'eca', 'ECA248G2573' => 'eca', 'EL10Ac1g00077' => 'bvu', 'EL10Ac1g01746' => 'bvu', 'EL10Ac2g03464' => 'bvu', 'EL10Ac4g08176' => 'bvu', 'EL10Ac7g17521' => 'bvu', 'EL10Ac8g20386' => 'bvu', 'EL10Ac9g21343' => 'bvu', 'EL10Ac9g22688' => 'bvu', 'Eucgr.B03434' => 'egr', 'Eucgr.D00618' => 'egr', 'Eucgr.E02395' => 'egr', 'Eucgr.F01129' => 'egr', 'Eucgr.F02622' => 'egr', 'Eucgr.F04207' => 'egr', 'FAN01G0570' => 'fan', 'FAN03G3351' => 'fan', 'FAN06G3702' => 'fan', 'FAN07G2149' => 'fan', 'FAN10G3758' => 'fan', 'FAN11G1170' => 'fan', 'FAN11G2050' => 'fan', 'FAN11G2724' => 'fan', 'FAN12G1700' => 'fan', 'FAN12G2028' => 'fan', 'FAN15G1160' => 'fan', 'FAN15G3063' => 'fan', 'FAN16G2540' => 'fan', 'FAN16G3077' => 'fan', 'FAN16G3624' => 'fan', 'FAN17G0221' => 'fan', 'FAN20G2492' => 'fan', 'FAN20G2905' => 'fan', 'FAN21G0548' => 'fan', 'FAN21G1300' => 'fan', 'FAN22G0077' => 'fan', 'FAN22G1315' => 'fan', 'FAN24G1280' => 'fan', 'FAN24G1445' => 'fan', 'FAN24G3527' => 'fan', 'FAN25G0464' => 'fan', 'FAN25G2885' => 'fan', 'FAN25G3270' => 'fan', 'FAN27G1101' => 'fan', 'FAN27G2846' => 'fan', 'FAN27G3524' => 'fan', 'FvH4_2g11770' => 'fve', 'FvH4_2g15630' => 'fve', 'FvH4_3g05570' => 'fve', 'FvH4_3g09110' => 'fve', 'FvH4_3g19940' => 'fve', 'FvH4_4g04821' => 'fve', 'FvH4_4g31480' => 'fve', 'FvH4_7g01740' => 'fve', 'Glyma.05G130400' => 'gma', 'Glyma.05G156400' => 'gma', 'Glyma.07G197000' => 'gma', 'Glyma.08G085151' => 'gma', 'Glyma.08G114500' => 'gma', 'Glyma.08G300400' => 'gma', 'Glyma.10G215800' => 'gma', 'Glyma.12G224400' => 'gma', 'Glyma.13G179300' => 'gma', 'Glyma.13G218151' => 'gma', 'Glyma.13G238800' => 'gma', 'Glyma.13G276900' => 'gma', 'Glyma.14G078200' => 'gma', 'Glyma.15G074500' => 'gma', 'Glyma.15G094100' => 'gma', 'Glyma.17G247200' => 'gma', 'Glyma.18G120100' => 'gma', 'Glyma.20G176000' => 'gma', 'Gohir.A01G063600' => 'ghi', 'Gohir.A01G170301' => 'ghi', 'Gohir.A02G060500' => 'ghi', 'Gohir.A05G133850' => 'ghi', 'Gohir.A05G161400' => 'ghi', 'Gohir.A06G012900' => 'ghi', 'Gohir.A06G035901' => 'ghi', 'Gohir.A06G127100' => 'ghi', 'Gohir.A06G210500' => 'ghi', 'Gohir.A08G008650' => 'ghi', 'Gohir.A09G072700' => 'ghi', 'Gohir.A09G088301' => 'ghi', 'Gohir.A10G040600' => 'ghi', 'Gohir.A12G036300' => 'ghi', 'Gohir.A12G143350' => 'ghi', 'Gohir.A12G165500' => 'ghi', 'Gohir.A13G145700' => 'ghi', 'Gohir.D01G050000' => 'ghi', 'Gohir.D01G051366' => 'ghi', 'Gohir.D01G161350' => 'ghi', 'Gohir.D02G065900' => 'ghi', 'Gohir.D05G164200' => 'ghi', 'Gohir.D05G355500' => 'ghi', 'Gohir.D06G010400' => 'ghi', 'Gohir.D06G111250' => 'ghi', 'Gohir.D06G132000' => 'ghi', 'Gohir.D06G210500' => 'ghi', 'Gohir.D07G165675' => 'ghi', 'Gohir.D08G062240' => 'ghi', 'Gohir.D08G086101' => 'ghi', 'Gohir.D08G138060' => 'ghi', 'Gohir.D09G072300' => 'ghi', 'Gohir.D10G041400' => 'ghi', 'Gohir.D11G191020' => 'ghi', 'Gohir.D11G212066' => 'ghi', 'Gohir.D12G036300' => 'ghi', 'Gohir.D12G168600' => 'ghi', 'Gohir.D13G150600' => 'ghi', 'Gorai.001G057300' => 'gra', 'Gorai.002G069900' => 'gra', 'Gorai.002G200000' => 'gra', 'Gorai.003G067600' => 'gra', 'Gorai.005G074800' => 'gra', 'Gorai.006G087300' => 'gra', 'Gorai.008G037500' => 'gra', 'Gorai.008G181400' => 'gra', 'Gorai.009G169400' => 'gra', 'Gorai.009G387900' => 'gra', 'Gorai.010G013300' => 'gra', 'Gorai.010G153800' => 'gra', 'Gorai.010G255800' => 'gra', 'Gorai.011G043700' => 'gra', 'Gorai.011G198900' => 'gra', 'Gorai.013G168400' => 'gra', 'GSVIVG01005212001' => 'vvi', 'GSVIVG01006163001' => 'vvi', 'GSVIVG01009625001' => 'vvi', 'GSVIVG01014338001' => 'vvi', 'GSVIVG01020005001' => 'vvi', 'GSVIVG01021450001' => 'vvi', 'GSVIVG01023975001' => 'vvi', 'GSVIVG01034490001' => 'vvi', 'HanXRQChr04g0112071' => 'han', 'HanXRQChr05g0131151' => 'han', 'HanXRQChr09g0262371' => 'han', 'HanXRQChr09g0268401' => 'han', 'HanXRQChr10g0279241' => 'han', 'HanXRQChr10g0297961' => 'han', 'HanXRQChr11g0326231' => 'han', 'HanXRQChr11g0328471' => 'han', 'HanXRQChr16g0507941' => 'han', 'HanXRQChr17g0560211' => 'han', 'Haze_02108' => 'cav', 'Haze_02428' => 'cav', 'Haze_05593' => 'cav', 'Haze_06448' => 'cav', 'Haze_09427' => 'cav', 'Haze_12022' => 'cav', 'Haze_17612' => 'cav', 'Haze_17928' => 'cav', 'Hma1.2p1_0032F.1_g019250' => 'hma', 'Hma1.2p1_0163F.1_g072690' => 'hma', 'Hma1.2p1_0265F.1_g106710' => 'hma', 'Hma1.2p1_0286F.1_g113970' => 'hma', 'Hma1.2p1_0363F.1_g136640' => 'hma', 'Hma1.2p1_0584F.1_g183470' => 'hma', 'Hma1.2p1_0885F.1_g232570' => 'hma', 'HPP92_006022' => 'vpl', 'HPP92_007320' => 'vpl', 'HPP92_011521' => 'vpl', 'HPP92_019387' => 'vpl', 'HPP92_024038' => 'vpl', 'Hund05891' => 'sun', 'Hund06450' => 'sun', 'Hund12053' => 'sun', 'Hund16800' => 'sun', 'Hund21222' => 'sun', 'Hund22896' => 'sun', 'Hund23746' => 'sun', 'Hund27083' => 'sun', 'Lalb_Chr02g0141831' => 'lal', 'Lalb_Chr02g0141841' => 'lal', 'Lalb_Chr05g0220411' => 'lal', 'Lalb_Chr06g0162081' => 'lal', 'Lalb_Chr09g0327651' => 'lal', 'Lalb_Chr13g0295051' => 'lal', 'Lalb_Chr15g0086801' => 'lal', 'Lalb_Chr16g0383781' => 'lal', 'Lalb_Chr16g0383791' => 'lal', 'Lalb_Chr18g0055441' => 'lal', 'Lalb_Chr18g0059611' => 'lal', 'Lalb_Chr20g0109661' => 'lal', 'Lalb_Chr20g0109831' => 'lal', 'Lalb_Chr20g0121871' => 'lal', 'Lalb_Chr22g0355361' => 'lal', 'Lalb_Chr25g0286371' => 'lal', 'Lj1A1187G43' => 'lonja', 'Lj1A1205T50' => 'lonja', 'Lj1A800G33' => 'lonja', 'Lj1C1187T7' => 'lonja', 'Lj1C843T11' => 'lonja', 'Lj1g0010940' => 'lja', 'Lj2A288T69' => 'lonja', 'Lj3g0024276' => 'lja', 'Lj4A47T76' => 'lonja', 'Lj4g0005805' => 'lja', 'Lj4g0006097' => 'lja', 'Lj4g0008528' => 'lja', 'Lj4g0024907' => 'lja', 'Lj5g0012472' => 'lja', 'Lj5g0018648' => 'lja', 'Lj6C789G1' => 'lonja', 'Lj6g0004000' => 'lja', 'Lj7A292G67' => 'lonja', 'Lj7A292T64' => 'lonja', 'Lj9A400T58' => 'lonja', 'Lsat_1_v5_gn_1_126181' => 'lsa', 'Lsat_1_v5_gn_4_123041' => 'lsa', 'Lsat_1_v5_gn_4_133620' => 'lsa', 'Lsat_1_v5_gn_4_53221' => 'lsa', 'Lsat_1_v5_gn_4_71961' => 'lsa', 'Lsat_1_v5_gn_7_105241' => 'lsa', 'Lsat_1_v5_gn_7_21361' => 'lsa', 'Lsat_1_v5_gn_7_28860' => 'lsa', 'Lsat_1_v5_gn_7_31260' => 'lsa', 'Lsat_1_v5_gn_8_52801' => 'lsa', 'Manes.02G191400' => 'mes', 'Manes.03G110100' => 'mes', 'Manes.04G071100' => 'mes', 'Manes.05G100500' => 'mes', 'Manes.05G164700' => 'mes', 'Manes.15G087000' => 'mes', 'Manes.15G121500' => 'mes', 'Manes.16G028300' => 'mes', 'Manes.17G046100' => 'mes', 'Manes.17G069800' => 'mes', 'Manes.18G100500' => 'mes', 'Mapoly0002s0109' => 'mpo', 'Mapoly0024s0007' => 'mpo', 'Mapoly0089s0032' => 'mpo', 'MBI04_g42241_MAGBIO' => 'mbi', 'MBI05_g11988_MAGBIO' => 'mbi', 'MBI05_g35452_MAGBIO' => 'mbi', 'MBI07_g30179_MAGBIO' => 'mbi', 'MBI07_g35859_MAGBIO' => 'mbi', 'MBI07_g35860_MAGBIO' => 'mbi', 'MBI07_g37166_MAGBIO' => 'mbi', 'MBI08_g18172_MAGBIO' => 'mbi', 'MBI09_g08441_MAGBIO' => 'mbi', 'MBI13_g01676_MAGBIO' => 'mbi', 'MBI14_g42955_MAGBIO' => 'mbi', 'MBI16_g13161_MAGBIO' => 'mbi', 'MBI17_g27204_MAGBIO' => 'mbi', 'MBI19_g21595_MAGBIO' => 'mbi', 'MD00G1148400' => 'mdo', 'MD02G1301200' => 'mdo', 'MD03G1227800' => 'mdo', 'MD05G1041100' => 'mdo', 'MD05G1124800' => 'mdo', 'MD05G1284000' => 'mdo', 'MD05G1338800' => 'mdo', 'MD05G1338900' => 'mdo', 'MD07G1022800' => 'mdo', 'MD10G1047500' => 'mdo', 'MD10G1127500' => 'mdo', 'MD10G1262300' => 'mdo', 'MD10G1293800' => 'mdo', 'MD16G1074300' => 'mdo', 'Medtr1g021670' => 'mtr', 'Medtr1g096320' => 'mtr', 'Medtr2g013690' => 'mtr', 'Medtr2g019450' => 'mtr', 'Medtr2g085170' => 'mtr', 'Medtr4g088785' => 'mtr', 'Medtr8g055930' => 'mtr', 'Medtr8g085850' => 'mtr', 'MELO3C002605.2' => 'cme', 'MELO3C003891.2' => 'cme', 'MELO3C004012.2' => 'cme', 'MELO3C007134.2' => 'cme', 'MELO3C008118.2' => 'cme', 'MELO3C016700.2' => 'cme', 'MELO3C024127.2' => 'cme', 'MELO3C033361.2' => 'cme', 'MELO3C033362.2' => 'cme', 'Migut.C00430' => 'egut', 'Migut.C01246' => 'egut', 'Migut.E00101' => 'egut', 'Migut.H01486' => 'egut', 'Migut.H01939' => 'egut', 'Migut.K00360' => 'egut', 'Migut.M00910' => 'egut', 'Migut.M01139' => 'egut', 'Migut.N02677' => 'egut', 'MSTRG.13252' => 'ama', 'MSTRG.14701' => 'ama', 'MSTRG.1521' => 'ama', 'MSTRG.15884' => 'ama', 'MSTRG.16242' => 'ama', 'MSTRG.22285' => 'ama', 'MSTRG.22444' => 'ama', 'MSTRG.2349' => 'ama', 'MSTRG.26308' => 'ama', 'MSTRG.28296' => 'ama', 'MSTRG.9895' => 'ama', 'Nitab4.5_0000110g0060' => 'nta', 'Nitab4.5_0000420g0130' => 'nta', 'Nitab4.5_0000422g0030' => 'nta', 'Nitab4.5_0000560g0180' => 'nta', 'Nitab4.5_0000703g0100' => 'nta', 'Nitab4.5_0000786g0200' => 'nta', 'Nitab4.5_0001336g0020' => 'nta', 'Nitab4.5_0001796g0030' => 'nta', 'Nitab4.5_0003348g0060' => 'nta', 'Nitab4.5_0003698g0040' => 'nta', 'Nitab4.5_0003942g0090' => 'nta', 'Nitab4.5_0004775g0070' => 'nta', 'Nitab4.5_0004864g0030' => 'nta', 'Nitab4.5_0005615g0020' => 'nta', 'Nitab4.5_0009288g0030' => 'nta', 'Nitab4.5_0009341g0010' => 'nta', 'Nitab4.5_0009535g0010' => 'nta', 'Nn1g03995' => 'nnu', 'Nn1g04100' => 'nnu', 'Nn1g06530' => 'nnu', 'Nn3g16404' => 'nnu', 'Nn3g17212' => 'nnu', 'Nn3g20776' => 'nnu', 'Nn3g21923' => 'nnu', 'Nn5g27737' => 'nnu', 'Nn5g29461' => 'nnu', 'Nn7g38355' => 'nnu', 'Nn8g39873' => 'nnu', 'Oeu000548.2' => 'oeu', 'Oeu004672.1' => 'oeu', 'Oeu015605.2' => 'oeu', 'Oeu016092.1' => 'oeu', 'Oeu017879.3' => 'oeu', 'Oeu024910.1' => 'oeu', 'Oeu028965.1' => 'oeu', 'Oeu031269.1' => 'oeu', 'Oeu031270.1' => 'oeu', 'Oeu032535.1' => 'oeu', 'Oeu034151.1' => 'oeu', 'Oeu034152.1' => 'oeu', 'Oeu034588.2' => 'oeu', 'Oeu050846.1' => 'oeu', 'Oeu050849.2' => 'oeu', 'Oeu051063.2' => 'oeu', 'Oeu052368.1' => 'oeu', 'Oeu052370.1' => 'oeu', 'Os01g0210400' => 'osa', 'Os01g0304300' => 'osa', 'Os01g0749100' => 'osa', 'Os02g0745800' => 'osa', 'Os03g0769050' => 'osa', 'Os05g0531500' => 'osa', 'Os06g0724300' => 'osa', 'Os11g0198100' => 'osa', 'Peaxi162Scf00069g01425' => 'pax', 'Peaxi162Scf00280g00811' => 'pax', 'Peaxi162Scf00310g00615' => 'pax', 'Peaxi162Scf00362g00542' => 'pax', 'Peaxi162Scf00461g00310' => 'pax', 'Peaxi162Scf00530g00118' => 'pax', 'Peaxi162Scf00541g00057' => 'pax', 'Peaxi162Scf00661g00017' => 'pax', 'Peaxi162Scf00926g00027' => 'pax', 'Peaxi162Scf01064g00263' => 'pax', 'Peaxi162Scf01211g00135' => 'pax', 'PGR004G2336' => 'pgr', 'PGR042G0327' => 'pgr', 'PGR042G1957' => 'pgr', 'PGR042G2003' => 'pgr', 'PGR042G3929' => 'pgr', 'PGR083G1137' => 'pgr', 'PGR083G1364' => 'pgr', 'PGSC0003DMG400003381' => 'stu', 'PGSC0003DMG400003417' => 'stu', 'PGSC0003DMG400008981' => 'stu', 'PGSC0003DMG400012417' => 'stu', 'PGSC0003DMG400012823' => 'stu', 'PGSC0003DMG400016885' => 'stu', 'PGSC0003DMG400022812' => 'stu', 'PGSC0003DMG400029726' => 'stu', 'PGSC0003DMG401009243' => 'stu', 'PGSC0003DMG401031505' => 'stu', 'PGSC0003DMG402031505' => 'stu', 'Phvul.001G017600' => 'pvu', 'Phvul.002G193500' => 'pvu', 'Phvul.002G228900' => 'pvu', 'Phvul.002G236800' => 'pvu', 'Phvul.003G049500' => 'pvu', 'Phvul.005G072000' => 'pvu', 'Phvul.006G164800' => 'pvu', 'Phvul.006G185100' => 'pvu', 'Phvul.007G090000' => 'pvu', 'Potri.001G399800' => 'ptr', 'Potri.002G149900' => 'ptr', 'Potri.004G044100' => 'ptr', 'Potri.004G177600' => 'ptr', 'Potri.009G138000' => 'ptr', 'Potri.010G094000' => 'ptr', 'Potri.011G053000' => 'ptr', 'Potri.011G119300' => 'ptr', 'Potri.013G113700' => 'ptr', 'Potri.018G107800' => 'ptr', 'Potri.019G084100' => 'ptr', 'Pp3c14_23720' => 'ppa', 'Pp3c16_6340' => 'ppa', 'Pp3c23_13420' => 'ppa', 'Pp3c24_2740' => 'ppa', 'Pp3c25_860' => 'ppa', 'Pp3c8_21750' => 'ppa', 'Prupe.1G273000' => 'ppe', 'Prupe.1G273700' => 'ppe', 'Prupe.1G274100' => 'ppe', 'Prupe.2G023300' => 'ppe', 'Prupe.4G048000' => 'ppe', 'Prupe.4G080400' => 'ppe', 'Prupe.4G181200' => 'ppe', 'Prupe.8G056900' => 'ppe', 'Prupe.8G168700' => 'ppe', 'Psat1g189080' => 'psa', 'Psat1g204760' => 'psa', 'Psat4g175560' => 'psa', 'Psat4g177720' => 'psa', 'Psat5g244240' => 'psa', 'Psat6g010720' => 'psa', 'Psat6g187200' => 'psa', 'Psat7g072040' => 'psa', 'PSO017G3501' => 'pso', 'PSO063G2148' => 'pso', 'PSO063G5608' => 'pso', 'PSO210G6392' => 'pso', 'PSO541G2319' => 'pso', 'PSO541G2836' => 'pso', 'PSO541G4012' => 'pso', 'PSO541G6253' => 'pso', 'PSO675G0580' => 'pso', 'PSO675G0856' => 'pso', 'PSO675G5635' => 'pso', 'PSO675G9157' => 'pso', 'PSO832G1660' => 'pso', 'PSO832G1969' => 'pso', 'QL02p007186' => 'qlo', 'QL02p033904' => 'qlo', 'QL03p064391' => 'qlo', 'QL05p040593' => 'qlo', 'QL05p058242' => 'qlo', 'QL08p021825' => 'qlo', 'QL11p004981' => 'qlo', 'RcHm_v2.0_Chr1g0318301' => 'rch', 'RcHm_v2.0_Chr4g0418501' => 'rch', 'RcHm_v2.0_Chr4g0439971' => 'rch', 'RcHm_v2.0_Chr5g0008541' => 'rch', 'RcHm_v2.0_Chr5g0014101' => 'rch', 'RcHm_v2.0_Chr5g0014131' => 'rch', 'RcHm_v2.0_Chr5g0033621' => 'rch', 'RcHm_v2.0_Chr6g0272041' => 'rch', 'RcHm_v2.0_Chr6g0278831' => 'rch', 'Rhsim02G0130400' => 'rsi', 'Rhsim02G0171100' => 'rsi', 'Rhsim05G0053000' => 'rsi', 'Rhsim05G0053100' => 'rsi', 'Rhsim06G0096500' => 'rsi', 'Rhsim06G0096600' => 'rsi', 'Rhsim06G0199100' => 'rsi', 'Rhsim12G0062300' => 'rsi', 'Rhsim12G0062800' => 'rsi', 'Sabra02G0118600' => 'sbr', 'Sabra04G0027300' => 'sbr', 'Sabra04G0119500' => 'sbr', 'Sabra08G0112500' => 'sbr', 'Sabra11G0036800' => 'sbr', 'Sabra11G0103800' => 'sbr', 'Sabra13G0096300' => 'sbr', 'Sabra16G0262300' => 'sbr', 'Sabra18G0091700' => 'sbr', 'Sabra19G0095400' => 'sbr', 'SalBow6G3080' => 'sbo', 'SalBow7G1157' => 'sbo', 'SalBow7G2123' => 'sbo', 'SalBow7G2285' => 'sbo', 'SalBow7G3537' => 'sbo', 'SalBow8G2947' => 'sbo', 'SalBow8G4463' => 'sbo', 'SalBow8G5466' => 'sbo', 'Sc01g0001750' => 'sci', 'Sc02g0006640' => 'sci', 'Sc02g0006670' => 'sci', 'Sc04g0008220' => 'sci', 'Sc05g0006190' => 'sci', 'Sc08g0002760' => 'sci', 'Sc17g0006170' => 'sci', 'Sc22g0002050' => 'sci', 'Sc23g0001190' => 'sci', 'Sc24g0000980' => 'sci', 'Sed0006245' => 'sed', 'Sed0007543' => 'sed', 'Sed0009411' => 'sed', 'Sed0010765' => 'sed', 'Sed0012944' => 'sed', 'Sed0014682' => 'sed', 'Sed0016174' => 'sed', 'Sed0016796' => 'sed', 'Sed0020317' => 'sed', 'Sed0021467' => 'sed', 'SEGI_01316' => 'sgi', 'SEGI_03374' => 'sgi', 'SEGI_16265' => 'sgi', 'SEGI_18569' => 'sgi', 'SEGI_20351' => 'sgi', 'SEGI_26395' => 'sgi', 'SEGI_29469' => 'sgi', 'SEGI_34771' => 'sgi', 'SEGI_36769' => 'sgi', 'SEGI_37139' => 'sgi', 'SGA_v2.0_scaffold100G29687' => 'sas', 'SGA_v2.0_scaffold118G32472' => 'sas', 'SGA_v2.0_scaffold14G07051' => 'sas', 'SGA_v2.0_scaffold183G39845' => 'sas', 'SGA_v2.0_scaffold1G00174' => 'sas', 'SGA_v2.0_scaffold22G09714' => 'sas', 'SGA_v2.0_scaffold333G48992' => 'sas', 'SGA_v2.0_scaffold46G17491' => 'sas', 'SGA_v2.0_scaffold49G18294' => 'sas', 'SGA_v2.0_scaffold63G21658' => 'sas', 'SHI01741' => 'shi', 'SHI05771' => 'shi', 'SHI18077' => 'shi', 'SHI20525' => 'shi', 'SHI20527' => 'shi', 'SHI20528' => 'shi', 'SMO172G0185' => 'smo', 'SMO198G0020' => 'smo', 'SMO351G0006' => 'smo', 'SMO356G0118' => 'smo', 'SMO358G0296' => 'smo', 'SMO367G0079' => 'smo', 'SMO367G1277' => 'smo', 'Solyc01g014220.3' => 'sly', 'Solyc01g111770.2' => 'sly', 'Solyc02g078180.3' => 'sly', 'Solyc03g006430.3' => 'sly', 'Solyc03g006456.1' => 'sly', 'Solyc03g079860.2' => 'sly', 'Solyc04g079770.3' => 'sly', 'Solyc05g007430.4' => 'sly', 'Solyc07g063150.3' => 'sly', 'Solyc08g016620.3' => 'sly', 'Solyc09g057590.3' => 'sly', 'Solyc09g057600.1' => 'sly', 'Solyc10g009050.3' => 'sly', 'Solyc11g017420.2' => 'sly', 'Sopen01g053810' => 'spe', 'Sopen02g023040' => 'spe', 'Sopen03g002440' => 'spe', 'Sopen04g033350' => 'spe', 'Sopen05g003310' => 'spe', 'Sopen07g004050' => 'spe', 'Sopen07g031340' => 'spe', 'Sopen08g006990' => 'spe', 'Sopen10g004830' => 'spe', 'Sopen11g009370' => 'spe', 'Sp1g24450' => 'spa', 'Sp1g29670' => 'spa', 'Sp1g39600' => 'spa', 'Sp2g11080' => 'spa', 'Sp2g13970' => 'spa', 'Sp4g16130' => 'spa', 'Sp6g13080' => 'spa', 'Sp7g37270' => 'spa', 'TAR371G0065' => 'tar', 'TAR376G0340' => 'tar', 'TAR376G0435' => 'tar', 'TAR381G0002' => 'tar', 'TAR381G1236' => 'tar', 'TAR624G0055' => 'tar', 'TAR624G0324' => 'tar', 'TAR624G0696' => 'tar', 'TAR624G0906' => 'tar', 'TAR625G0107' => 'tar', 'TAR626G0015' => 'tar', 'TAR626G1356' => 'tar', 'TAR627G0888' => 'tar', 'TAR628G0399' => 'tar', 'TAR628G1327' => 'tar', 'TAR629G2831' => 'tar', 'TAR629G2874' => 'tar', 'TAR633G1432' => 'tar', 'TAR633G2771' => 'tar', 'THA.LOC104803394' => 'tha', 'THA.LOC104805153' => 'tha', 'THA.LOC104806784' => 'tha', 'THA.LOC104810473' => 'tha', 'THA.LOC104813100' => 'tha', 'THA.LOC104814215' => 'tha', 'THA.LOC104815554' => 'tha', 'THA.LOC104820544' => 'tha', 'THA.LOC104824754' => 'tha', 'THA.LOC104827717' => 'tha', 'Thecc.02G031400' => 'tca', 'Thecc.02G055900' => 'tca', 'Thecc.02G350800' => 'tca', 'Thecc.06G150900' => 'tca', 'Thecc.06G186600' => 'tca', 'Thecc.07G089600' => 'tca', 'Thecc.08G020400' => 'tca', 'Thecc.08G182100' => 'tca', 'Thhalv10000873m.g' => 'esa', 'Thhalv10004185m.g' => 'esa', 'Thhalv10006981m.g' => 'esa', 'Thhalv10007204m.g' => 'esa', 'Thhalv10011374m.g' => 'esa', 'Thhalv10013482m.g' => 'esa', 'Thhalv10017801m.g' => 'esa', 'Thhalv10024983m.g' => 'esa', 'TPR.G12072' => 'tpr', 'TPR.G15769' => 'tpr', 'TPR.G16504' => 'tpr', 'TPR.G16506' => 'tpr', 'TPR.G24345' => 'tpr', 'TPR.G26666' => 'tpr', 'TPR.G27320' => 'tpr', 'TPR.G31819' => 'tpr', 'TPR.G38879' => 'tpr', 'TPR.G39015' => 'tpr', 'TPR.G8819' => 'tpr', 'TWI09G0924' => 'twi', 'TWI12G0811' => 'twi', 'TWI12G1294' => 'twi', 'TWI31G0150' => 'twi', 'TWI36G1262' => 'twi', 'TWI38G1287' => 'twi', 'TWI38G1633' => 'twi', 'TWI38G1982' => 'twi', 'TWI39G0116' => 'twi', 'TWI60G1011' => 'twi', 'TWI63G0171' => 'twi', 'TWI73G0839' => 'twi', 'TWI79G1511' => 'twi', 'unitig_0.g915' => 'ugi', 'unitig_0.g916' => 'ugi', 'unitig_21.g20219' => 'ugi', 'unitig_21.g20416' => 'ugi', 'unitig_578.g16132' => 'ugi', 'unitig_578.g16718' => 'ugi', 'unitig_62.g23481' => 'ugi', 'unitig_744.g24535' => 'ugi', 'unitig_749.g13525' => 'ugi', 'vmacro01248' => 'vma', 'vmacro02290' => 'vma', 'vmacro10946' => 'vma', 'vmacro11865' => 'vma', 'vmacro12493' => 'vma', 'vmacro17322' => 'vma', 'vmacro21599' => 'vma', 'vmacro23041' => 'vma', 'VMungo0251G0004' => 'vmu', 'VMungo0251G2639' => 'vmu', 'VMungo0251G2967' => 'vmu', 'VMungo0540G0864' => 'vmu', 'VMungo0540G1569' => 'vmu', 'VMungo0647G0317' => 'vmu', 'VMungo0720G1373' => 'vmu', 'VMungo0720G1508' => 'vmu', 'VMungo1080G0485' => 'vmu', 'VMungo1215G3177' => 'vmu', 'Zm00001eb112600' => 'zma', 'Zm00001eb120220' => 'zma', 'Zm00001eb153240' => 'zma', 'Zm00001eb168880' => 'zma', 'Zm00001eb213920' => 'zma', 'Zm00001eb228280' => 'zma', 'Zm00001eb254580' => 'zma', 'Zm00001eb272180' => 'zma', 'Zm00001eb293190' => 'zma', 'Zm00001eb322930' => 'zma', 'Zm00001eb353360' => 'zma', 'Zm00001eb353390' => 'zma', 'Zm00001eb353430' => 'zma', 'Zm00001eb353440' => 'zma', 'Zm00001eb353780' => 'zma' ) $gf_id = 'HOM05D000499' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000499' ) $data_identifier = 'HOM05D000499' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 29, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 12, 'amhyb' => (int) 8, 'aly' => (int) 12, 'aox' => (int) 9, 'arhy' => (int) 26, 'ath' => (int) 8, 'atr' => (int) 7, 'acertr' => (int) 10, 'cqu' => (int) 15, 'bca' => (int) 29, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 11, 'cansat' => (int) 8, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 9, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 8, 'cpa' => (int) 10, 'csa' => (int) 7, 'camsi' => (int) 20, 'dca' => (int) 8, 'din' => (int) 12, 'dzi' => (int) 14, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 6, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 38, 'gra' => (int) 16, 'vvi' => (int) 8, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 5, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 11, 'lja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 11, 'mpo' => (int) 3, 'mbi' => (int) 14, 'mdo' => (int) 14, 'mtr' => (int) 8, 'cme' => (int) 9, 'egut' => (int) 9, 'ama' => (int) 11, 'nta' => (int) 17, 'nnu' => (int) 11, 'oeu' => (int) 18, 'osa' => (int) 8, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 6, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 9, 'rsi' => (int) 9, 'sbr' => (int) 10, 'sbo' => (int) 8, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 10, 'sas' => (int) 10, 'shi' => (int) 6, 'smo' => (int) 7, 'sly' => (int) 14, 'spe' => (int) 10, 'spa' => (int) 8, 'tar' => (int) 19, 'tha' => (int) 10, 'tca' => (int) 8, 'esa' => (int) 8, 'tpr' => (int) 11, 'twi' => (int) 13, 'ugi' => (int) 9, 'vma' => (int) 8, 'vmu' => (int) 10, 'zma' => (int) 15 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb353780' $species_info = array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ) $local_species = 'sed' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000499', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1066', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p29780' => 'bna', 'A02p33180' => 'bna', 'A03p16470' => 'bna', 'A03p66010' => 'bna', 'A04p25970' => 'bna', 'A06p01270' => 'bna', 'A06p46080' => 'bna', 'A07p11400' => 'bna', 'A08p01840' => 'bna', 'A08p08230' => 'bna', 'A08p25740' => 'bna', 'A09p32070' => 'bna', 'A09p37830' => 'bna', 'A09p42840' => 'bna', 'A09p42850' => 'bna', 'Aa31LG10G2060' => 'aar', 'Aa31LG2G7410' => 'aar', 'Aa31LG6G10200' => 'aar', 'Aa31LG6G16680' => 'aar', 'Aa31LG6G8470' => 'aar', 'Aa31LG9G12730' => 'aar', 'Aa31LG9G13680' => 'aar', 'Aa31LG9G14920' => 'aar', 'Aa31LG9G6650' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4977' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5467' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3254' => 'aag', 'Actinidia02578' => 'ach', 'Actinidia07693' => 'ach', 'Actinidia08413' => 'ach', 'Actinidia08414' => 'ach', 'Actinidia15289' => 'ach', 'Actinidia19871' => 'ach', 'Actinidia21475' => 'ach', 'Actinidia22576' => 'ach', 'Actinidia28327' => 'ach', 'Actinidia32491' => 'ach', 'Actinidia39463' => 'ach', 'Actinidia39571' => 'ach', 'Ah.01g013750' => 'amhyb', 'Ah.01g023210' => 'amhyb', 'Ah.04g164850' => 'amhyb', 'Ah.05g178060' => 'amhyb', 'Ah.07g204270' => 'amhyb', 'Ah.07g208480' => 'amhyb', 'Ah.09g237410' => 'amhyb', 'Ah.14g089460' => 'amhyb', 'AL1G41790' => 'aly', 'AL1G49050' => 'aly', 'AL1G53810' => 'aly', 'AL1G61400' => 'aly', 'AL4G18580' => 'aly', 'AL5G12510' => 'aly', 'AL5G12540' => 'aly', 'AL6G43230' => 'aly', 'AL7G10370' => 'aly', 'AL7G19250' => 'aly', 'AL8G12240' => 'aly', 'AL8G18540' => 'aly', 'Aqoxy1G02409' => 'aox', 'Aqoxy2G03993' => 'aox', 'Aqoxy3G03357' => 'aox', 'Aqoxy4G00785' => 'aox', 'Aqoxy5G02598' => 'aox', 'Aqoxy6G00132' => 'aox', 'Aqoxy7G01776' => 'aox', 'Aqoxy7G02316' => 'aox', 'Aqoxy7G03973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.12AFKW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B8730' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27IQR1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3F75VG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3RE0GA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41TCQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.527VTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FIR39' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5W8UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DA38EV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ63HS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H1I32C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HC27T5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4M8AP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7N3CZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9UVDZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LS1NQA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT1D4B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SKC4TM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCFV76' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF9Q1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQWD9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1ZM88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WE07RT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YCK7VH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJE6Q6' => 'arhy', 'AT1G28240' => 'ath', 'AT1G34550' => 'ath', 'AT1G53040' => 'ath', 'AT2G02910' => 'ath', 'AT4G09630' => 'ath', 'AT4G38500' => 'ath', 'AT5G42660' => 'ath', 'AT5G46220' => 'ath', 'ATR0152G026' => 'atr', 'ATR0564G343' => 'atr', 'ATR0706G151' => 'atr', 'ATR0733G207' => 'atr', 'ATR0751G234' => 'atr', 'ATR0807G048' => 'atr', 'ATR1091G084' => 'atr', 'Atru.chr10.1229' => 'acertr', 'Atru.chr10.1230' => 'acertr', 'Atru.chr10.1874' => 'acertr', 'Atru.chr11.1808' => 'acertr', 'Atru.chr13.1795' => 'acertr', 'Atru.chr13.570' => 'acertr', 'Atru.chr2.2608' => 'acertr', 'Atru.chr2.2609' => 'acertr', 'Atru.chr5.3428' => 'acertr', 'Atru.chr8.1171' => 'acertr', 'AUR62004651' => 'cqu', 'AUR62008675' => 'cqu', 'AUR62010014' => 'cqu', 'AUR62013004' => 'cqu', 'AUR62014825' => 'cqu', 'AUR62015015' => 'cqu', 'AUR62015151' => 'cqu', 'AUR62017020' => 'cqu', 'AUR62019422' => 'cqu', 'AUR62023570' => 'cqu', 'AUR62025571' => 'cqu', 'AUR62029098' => 'cqu', 'AUR62033863' => 'cqu', 'AUR62034296' => 'cqu', 'AUR62040075' => 'cqu', 'BcaB02g07334' => 'bca', 'BcaB02g10575' => 'bca', 'BcaB03g12119' => 'bca', 'BcaB03g12120' => 'bca', 'BcaB03g13945' => 'bca', 'BcaB04g17123' => 'bca', 'BcaB04g17867' => 'bca', 'BcaB04g19839' => 'bca', 'BcaB07g30317' => 'bca', 'BcaB07g32432' => 'bca', 'BcaB07g33362' => 'bca', 'BcaB08g36611' => 'bca', 'BcaC01g00028' => 'bca', 'BcaC01g01356' => 'bca', 'BcaC01g02034' => 'bca', 'BcaC01g06051' => 'bca', 'BcaC03g16839' => 'bca', 'BcaC03g17176' => 'bca', 'BcaC05g26829' => 'bca', 'BcaC06g31490' => 'bca', 'BcaC06g35344' => 'bca', 'BcaC06g36570' => 'bca', 'BcaC07g37537' => 'bca', 'BcaC08g43491' => 'bca', 'BcaC08g43773' => 'bca', 'BcaNung00234' => 'bca', 'BcaNung01982' => 'bca', 'BcaNung03707' => 'bca', 'BcaNung06454' => 'bca', 'BolC2t10762H' => 'bol', 'BolC2t11191H' => 'bol', 'BolC3t14322H' => 'bol', 'BolC3t19747H' => 'bol', 'BolC3t21425H' => 'bol', 'BolC4t27800H' => 'bol', 'BolC5t31423H' => 'bol', 'BolC6t35951H' => 'bol', 'BolC6t36282H' => 'bol', 'BolC7t40678H' => 'bol', 'BolC7t40679H' => 'bol', 'BolC7t42222H' => 'bol', 'BolC7t43492H' => 'bol', 'BolC7t46785H' => 'bol', 'BolC8t47853H' => 'bol', 'BolC9t56805H' => 'bol', 'BraA02t08000Z' => 'bra', 'BraA02t08341Z' => 'bra', 'BraA03t10936Z' => 'bra', 'BraA03t15657Z' => 'bra', 'BraA04t18100Z' => 'bra', 'BraA05t20523Z' => 'bra', 'BraA06t23353Z' => 'bra', 'BraA06t27473Z' => 'bra', 'BraA06t27769Z' => 'bra', 'BraA07t28928Z' => 'bra', 'BraA08t32236Z' => 'bra', 'BraA08t32841Z' => 'bra', 'BraA08t34524Z' => 'bra', 'BraA09t38742Z' => 'bra', 'BraA09t39295Z' => 'bra', 'C02p47180' => 'bna', 'C02p50990' => 'bna', 'C03p19360' => 'bna', 'C03p74950' => 'bna', 'C03p91000' => 'bna', 'C04p63260' => 'bna', 'C05p27050' => 'bna', 'C06p08750' => 'bna', 'C06p11490' => 'bna', 'C07p02820' => 'bna', 'C07p17180' => 'bna', 'C07p29440' => 'bna', 'C07p63730' => 'bna', 'C09p39260' => 'bna', 'CAN.G1164.34' => 'can', 'CAN.G1164.39' => 'can', 'CAN.G1530.3' => 'can', 'CAN.G162.61' => 'can', 'CAN.G176.6' => 'can', 'CAN.G289.49' => 'can', 'CAN.G370.21' => 'can', 'CAN.G370.22' => 'can', 'CAN.G371.117' => 'can', 'CAN.G58.37' => 'can', 'CAN.G588.98' => 'can', 'CANSAT21G2266' => 'cansat', 'CANSAT25G2799' => 'cansat', 'CANSAT35G0862' => 'cansat', 'CANSAT35G1704' => 'cansat', 'CANSAT35G1760' => 'cansat', 'CANSAT56G3971' => 'cansat', 'CANSAT56G4116' => 'cansat', 'CANSAT80G1259' => 'cansat', 'CARHR027730' => 'chi', 'CARHR033880' => 'chi', 'CARHR043270' => 'chi', 'CARHR145330' => 'chi', 'CARHR145340' => 'chi', 'CARHR175570' => 'chi', 'CARHR181570' => 'chi', 'CARHR258470' => 'chi', 'CARHR260490' => 'chi', 'CARHR294220' => 'chi', 'Carub.0001s2668' => 'cru', 'Carub.0001s3257' => 'cru', 'Carub.0001s4220' => 'cru', 'Carub.0005s0179' => 'cru', 'Carub.0006s2807' => 'cru', 'Carub.0007s0039' => 'cru', 'Carub.0008s0169' => 'cru', 'Carub.0008s0636' => 'cru', 'Ca_00338_v3' => 'car', 'Ca_00542_v3' => 'car', 'Ca_01844_v3' => 'car', 'Ca_10611_v3' => 'car', 'Ca_13326_v3' => 'car', 'Ca_17944_v3' => 'car', 'Ca_18546_v3' => 'car', 'Ca_24219_v3' => 'car', 'Ca_29972_v3' => 'car', 'CBR_g3681' => 'cbr', 'CBR_g40021' => 'cbr', 'Cc01_g08140' => 'ccan', 'Cc02_g13410' => 'ccan', 'Cc02_g37480' => 'ccan', 'Cc05_g12030' => 'ccan', 'Cc09_g03370' => 'ccan', 'Cc09_g10300' => 'ccan', 'Cc10_g03530' => 'ccan', 'Cc10_g11380' => 'ccan', 'CDE01G0176' => 'cde', 'CDE02G0675' => 'cde', 'CDE02G0942' => 'cde', 'CDE02G1153' => 'cde', 'CDE02G4177' => 'cde', 'CDE04G2117' => 'cde', 'CDE04G2736' => 'cde', 'CDE08G1161' => 'cde', 'CDE09G1238' => 'cde', 'Cfa000467' => 'cfa', 'Cfa000947' => 'cfa', 'Cfa004969' => 'cfa', 'Cfa005284' => 'cfa', 'Cfa008993' => 'cfa', 'Cfa018187' => 'cfa', 'Cfa018454' => 'cfa', 'Cfa020585' => 'cfa', 'Ciclev10000424m.g' => 'ccl', 'Ciclev10003605m.g' => 'ccl', 'Ciclev10007828m.g' => 'ccl', 'Ciclev10014620m.g' => 'ccl', 'Ciclev10015169m.g' => 'ccl', 'Ciclev10018291m.g' => 'ccl', 'Ciclev10028256m.g' => 'ccl', 'Ciclev10033822m.g' => 'ccl', 'CiPaw.05G060300' => 'cil', 'CiPaw.05G085000' => 'cil', 'CiPaw.06G083700' => 'cil', 'CiPaw.06G120300' => 'cil', 'CiPaw.09G060500' => 'cil', 'CiPaw.09G123800' => 'cil', 'CiPaw.11G169700' => 'cil', 'CiPaw.12G118300' => 'cil', 'CiPaw.15G071000' => 'cil', 'CiPaw.15G081900' => 'cil', 'ClCG01G024610' => 'cla', 'ClCG03G006070' => 'cla', 'ClCG05G019250' => 'cla', 'ClCG09G009500' => 'cla', 'ClCG11G008200' => 'cla', 'ClCG11G018080' => 'cla', 'COL.COLO4_17373' => 'col', 'COL.COLO4_22994' => 'col', 'COL.COLO4_26389' => 'col', 'COL.COLO4_27170' => 'col', 'COL.COLO4_31074' => 'col', 'COL.COLO4_31465' => 'col', 'COL.COLO4_36438' => 'col', 'COL.COLO4_36439' => 'col', 'Cpa.g.c38781' => 'cpa', 'Cpa.g.sc128.12' => 'cpa', 'Cpa.g.sc166.7' => 'cpa', 'Cpa.g.sc166.8' => 'cpa', 'Cpa.g.sc20.111' => 'cpa', 'Cpa.g.sc27.31' => 'cpa', 'Cpa.g.sc64.36' => 'cpa', 'Cpa.g.sc64.37' => 'cpa', 'Cpa.g.sc66.49' => 'cpa', 'Cpa.g.sc80.64' => 'cpa', 'CsaV3_1G012320' => 'csa', 'CsaV3_2G008480' => 'csa', 'CsaV3_2G033450' => 'csa', 'CsaV3_3G044830' => 'csa', 'CsaV3_4G033710' => 'csa', 'CsaV3_6G051730' => 'csa', 'CsaV3_7G025350' => 'csa', 'CSS0001067' => 'camsi', 'CSS0005996' => 'camsi', 'CSS0006590' => 'camsi', 'CSS0009673' => 'camsi', 'CSS0010201' => 'camsi', 'CSS0010549' => 'camsi', 'CSS0011364' => 'camsi', 'CSS0014473' => 'camsi', 'CSS0014961' => 'camsi', 'CSS0020191' => 'camsi', 'CSS0021165' => 'camsi', 'CSS0022306' => 'camsi', 'CSS0030591' => 'camsi', 'CSS0030696' => 'camsi', 'CSS0032653' => 'camsi', 'CSS0037487' => 'camsi', 'CSS0041102' => 'camsi', 'CSS0041261' => 'camsi', 'CSS0046246' => 'camsi', 'CSS0049256' => 'camsi', 'DCAR_004075' => 'dca', 'DCAR_011538' => 'dca', 'DCAR_019553' => 'dca', 'DCAR_020952' => 'dca', 'DCAR_021739' => 'dca', 'DCAR_027407' => 'dca', 'DCAR_027913' => 'dca', 'DCAR_028066' => 'dca', 'Dinv05899' => 'din', 'Dinv07563' => 'din', 'Dinv08010' => 'din', 'Dinv14125' => 'din', 'Dinv20172' => 'din', 'Dinv30743' => 'din', 'Dinv31229' => 'din', 'Dinv34162' => 'din', 'Dinv36028' => 'din', 'Dinv39368' => 'din', 'Dinv40565' => 'din', 'Dinv41706' => 'din', 'Duzib052G0089' => 'dzi', 'Duzib116G0641' => 'dzi', 'Duzib132G0069' => 'dzi', 'Duzib132G1219' => 'dzi', 'Duzib147G0278' => 'dzi', 'Duzib160G0480' => 'dzi', 'Duzib170G0661' => 'dzi', 'Duzib177G0591' => 'dzi', 'Duzib187G1353' => 'dzi', 'Duzib192G0858' => 'dzi', 'Duzib192G0883' => 'dzi', 'Duzib213G0506' => 'dzi', 'Duzib235G0289' => 'dzi', 'Duzib251G0422' => 'dzi', 'ECA232G3898' => 'eca', 'ECA233G5950' => 'eca', 'ECA234G1699' => 'eca', 'ECA234G2421' => 'eca', 'ECA236G0426' => 'eca', 'ECA236G4331' => 'eca', 'ECA248G2573' => 'eca', 'EL10Ac1g00077' => 'bvu', 'EL10Ac1g01746' => 'bvu', 'EL10Ac2g03464' => 'bvu', 'EL10Ac4g08176' => 'bvu', 'EL10Ac7g17521' => 'bvu', 'EL10Ac8g20386' => 'bvu', 'EL10Ac9g21343' => 'bvu', 'EL10Ac9g22688' => 'bvu', 'Eucgr.B03434' => 'egr', 'Eucgr.D00618' => 'egr', 'Eucgr.E02395' => 'egr', 'Eucgr.F01129' => 'egr', 'Eucgr.F02622' => 'egr', 'Eucgr.F04207' => 'egr', 'FAN01G0570' => 'fan', 'FAN03G3351' => 'fan', 'FAN06G3702' => 'fan', 'FAN07G2149' => 'fan', 'FAN10G3758' => 'fan', 'FAN11G1170' => 'fan', 'FAN11G2050' => 'fan', 'FAN11G2724' => 'fan', 'FAN12G1700' => 'fan', 'FAN12G2028' => 'fan', 'FAN15G1160' => 'fan', 'FAN15G3063' => 'fan', 'FAN16G2540' => 'fan', 'FAN16G3077' => 'fan', 'FAN16G3624' => 'fan', 'FAN17G0221' => 'fan', 'FAN20G2492' => 'fan', 'FAN20G2905' => 'fan', 'FAN21G0548' => 'fan', 'FAN21G1300' => 'fan', 'FAN22G0077' => 'fan', 'FAN22G1315' => 'fan', 'FAN24G1280' => 'fan', 'FAN24G1445' => 'fan', 'FAN24G3527' => 'fan', 'FAN25G0464' => 'fan', 'FAN25G2885' => 'fan', 'FAN25G3270' => 'fan', 'FAN27G1101' => 'fan', 'FAN27G2846' => 'fan', 'FAN27G3524' => 'fan', 'FvH4_2g11770' => 'fve', 'FvH4_2g15630' => 'fve', 'FvH4_3g05570' => 'fve', 'FvH4_3g09110' => 'fve', 'FvH4_3g19940' => 'fve', 'FvH4_4g04821' => 'fve', 'FvH4_4g31480' => 'fve', 'FvH4_7g01740' => 'fve', 'Glyma.05G130400' => 'gma', 'Glyma.05G156400' => 'gma', 'Glyma.07G197000' => 'gma', 'Glyma.08G085151' => 'gma', 'Glyma.08G114500' => 'gma', 'Glyma.08G300400' => 'gma', 'Glyma.10G215800' => 'gma', 'Glyma.12G224400' => 'gma', 'Glyma.13G179300' => 'gma', 'Glyma.13G218151' => 'gma', 'Glyma.13G238800' => 'gma', 'Glyma.13G276900' => 'gma', 'Glyma.14G078200' => 'gma', 'Glyma.15G074500' => 'gma', 'Glyma.15G094100' => 'gma', 'Glyma.17G247200' => 'gma', 'Glyma.18G120100' => 'gma', 'Glyma.20G176000' => 'gma', 'Gohir.A01G063600' => 'ghi', 'Gohir.A01G170301' => 'ghi', 'Gohir.A02G060500' => 'ghi', 'Gohir.A05G133850' => 'ghi', 'Gohir.A05G161400' => 'ghi', 'Gohir.A06G012900' => 'ghi', 'Gohir.A06G035901' => 'ghi', 'Gohir.A06G127100' => 'ghi', 'Gohir.A06G210500' => 'ghi', 'Gohir.A08G008650' => 'ghi', 'Gohir.A09G072700' => 'ghi', 'Gohir.A09G088301' => 'ghi', 'Gohir.A10G040600' => 'ghi', 'Gohir.A12G036300' => 'ghi', 'Gohir.A12G143350' => 'ghi', 'Gohir.A12G165500' => 'ghi', 'Gohir.A13G145700' => 'ghi', 'Gohir.D01G050000' => 'ghi', 'Gohir.D01G051366' => 'ghi', 'Gohir.D01G161350' => 'ghi', 'Gohir.D02G065900' => 'ghi', 'Gohir.D05G164200' => 'ghi', 'Gohir.D05G355500' => 'ghi', 'Gohir.D06G010400' => 'ghi', 'Gohir.D06G111250' => 'ghi', 'Gohir.D06G132000' => 'ghi', 'Gohir.D06G210500' => 'ghi', 'Gohir.D07G165675' => 'ghi', 'Gohir.D08G062240' => 'ghi', 'Gohir.D08G086101' => 'ghi', 'Gohir.D08G138060' => 'ghi', 'Gohir.D09G072300' => 'ghi', 'Gohir.D10G041400' => 'ghi', 'Gohir.D11G191020' => 'ghi', 'Gohir.D11G212066' => 'ghi', 'Gohir.D12G036300' => 'ghi', 'Gohir.D12G168600' => 'ghi', 'Gohir.D13G150600' => 'ghi', 'Gorai.001G057300' => 'gra', 'Gorai.002G069900' => 'gra', 'Gorai.002G200000' => 'gra', 'Gorai.003G067600' => 'gra', 'Gorai.005G074800' => 'gra', 'Gorai.006G087300' => 'gra', 'Gorai.008G037500' => 'gra', 'Gorai.008G181400' => 'gra', 'Gorai.009G169400' => 'gra', 'Gorai.009G387900' => 'gra', 'Gorai.010G013300' => 'gra', 'Gorai.010G153800' => 'gra', 'Gorai.010G255800' => 'gra', 'Gorai.011G043700' => 'gra', 'Gorai.011G198900' => 'gra', 'Gorai.013G168400' => 'gra', 'GSVIVG01005212001' => 'vvi', 'GSVIVG01006163001' => 'vvi', 'GSVIVG01009625001' => 'vvi', 'GSVIVG01014338001' => 'vvi', 'GSVIVG01020005001' => 'vvi', 'GSVIVG01021450001' => 'vvi', 'GSVIVG01023975001' => 'vvi', 'GSVIVG01034490001' => 'vvi', 'HanXRQChr04g0112071' => 'han', 'HanXRQChr05g0131151' => 'han', 'HanXRQChr09g0262371' => 'han', 'HanXRQChr09g0268401' => 'han', 'HanXRQChr10g0279241' => 'han', 'HanXRQChr10g0297961' => 'han', 'HanXRQChr11g0326231' => 'han', 'HanXRQChr11g0328471' => 'han', 'HanXRQChr16g0507941' => 'han', 'HanXRQChr17g0560211' => 'han', 'Haze_02108' => 'cav', 'Haze_02428' => 'cav', 'Haze_05593' => 'cav', 'Haze_06448' => 'cav', 'Haze_09427' => 'cav', 'Haze_12022' => 'cav', 'Haze_17612' => 'cav', 'Haze_17928' => 'cav', 'Hma1.2p1_0032F.1_g019250' => 'hma', 'Hma1.2p1_0163F.1_g072690' => 'hma', 'Hma1.2p1_0265F.1_g106710' => 'hma', 'Hma1.2p1_0286F.1_g113970' => 'hma', 'Hma1.2p1_0363F.1_g136640' => 'hma', 'Hma1.2p1_0584F.1_g183470' => 'hma', 'Hma1.2p1_0885F.1_g232570' => 'hma', 'HPP92_006022' => 'vpl', 'HPP92_007320' => 'vpl', 'HPP92_011521' => 'vpl', 'HPP92_019387' => 'vpl', 'HPP92_024038' => 'vpl', 'Hund05891' => 'sun', 'Hund06450' => 'sun', 'Hund12053' => 'sun', 'Hund16800' => 'sun', 'Hund21222' => 'sun', 'Hund22896' => 'sun', 'Hund23746' => 'sun', 'Hund27083' => 'sun', 'Lalb_Chr02g0141831' => 'lal', 'Lalb_Chr02g0141841' => 'lal', 'Lalb_Chr05g0220411' => 'lal', 'Lalb_Chr06g0162081' => 'lal', 'Lalb_Chr09g0327651' => 'lal', 'Lalb_Chr13g0295051' => 'lal', 'Lalb_Chr15g0086801' => 'lal', 'Lalb_Chr16g0383781' => 'lal', 'Lalb_Chr16g0383791' => 'lal', 'Lalb_Chr18g0055441' => 'lal', 'Lalb_Chr18g0059611' => 'lal', 'Lalb_Chr20g0109661' => 'lal', 'Lalb_Chr20g0109831' => 'lal', 'Lalb_Chr20g0121871' => 'lal', 'Lalb_Chr22g0355361' => 'lal', 'Lalb_Chr25g0286371' => 'lal', 'Lj1A1187G43' => 'lonja', 'Lj1A1205T50' => 'lonja', 'Lj1A800G33' => 'lonja', 'Lj1C1187T7' => 'lonja', 'Lj1C843T11' => 'lonja', 'Lj1g0010940' => 'lja', 'Lj2A288T69' => 'lonja', 'Lj3g0024276' => 'lja', 'Lj4A47T76' => 'lonja', 'Lj4g0005805' => 'lja', 'Lj4g0006097' => 'lja', 'Lj4g0008528' => 'lja', 'Lj4g0024907' => 'lja', 'Lj5g0012472' => 'lja', 'Lj5g0018648' => 'lja', 'Lj6C789G1' => 'lonja', 'Lj6g0004000' => 'lja', 'Lj7A292G67' => 'lonja', 'Lj7A292T64' => 'lonja', 'Lj9A400T58' => 'lonja', 'Lsat_1_v5_gn_1_126181' => 'lsa', 'Lsat_1_v5_gn_4_123041' => 'lsa', 'Lsat_1_v5_gn_4_133620' => 'lsa', 'Lsat_1_v5_gn_4_53221' => 'lsa', 'Lsat_1_v5_gn_4_71961' => 'lsa', 'Lsat_1_v5_gn_7_105241' => 'lsa', 'Lsat_1_v5_gn_7_21361' => 'lsa', 'Lsat_1_v5_gn_7_28860' => 'lsa', 'Lsat_1_v5_gn_7_31260' => 'lsa', 'Lsat_1_v5_gn_8_52801' => 'lsa', 'Manes.02G191400' => 'mes', 'Manes.03G110100' => 'mes', 'Manes.04G071100' => 'mes', 'Manes.05G100500' => 'mes', 'Manes.05G164700' => 'mes', 'Manes.15G087000' => 'mes', 'Manes.15G121500' => 'mes', 'Manes.16G028300' => 'mes', 'Manes.17G046100' => 'mes', 'Manes.17G069800' => 'mes', 'Manes.18G100500' => 'mes', 'Mapoly0002s0109' => 'mpo', 'Mapoly0024s0007' => 'mpo', 'Mapoly0089s0032' => 'mpo', 'MBI04_g42241_MAGBIO' => 'mbi', 'MBI05_g11988_MAGBIO' => 'mbi', 'MBI05_g35452_MAGBIO' => 'mbi', 'MBI07_g30179_MAGBIO' => 'mbi', 'MBI07_g35859_MAGBIO' => 'mbi', 'MBI07_g35860_MAGBIO' => 'mbi', 'MBI07_g37166_MAGBIO' => 'mbi', 'MBI08_g18172_MAGBIO' => 'mbi', 'MBI09_g08441_MAGBIO' => 'mbi', 'MBI13_g01676_MAGBIO' => 'mbi', 'MBI14_g42955_MAGBIO' => 'mbi', 'MBI16_g13161_MAGBIO' => 'mbi', 'MBI17_g27204_MAGBIO' => 'mbi', 'MBI19_g21595_MAGBIO' => 'mbi', 'MD00G1148400' => 'mdo', 'MD02G1301200' => 'mdo', 'MD03G1227800' => 'mdo', 'MD05G1041100' => 'mdo', 'MD05G1124800' => 'mdo', 'MD05G1284000' => 'mdo', 'MD05G1338800' => 'mdo', 'MD05G1338900' => 'mdo', 'MD07G1022800' => 'mdo', 'MD10G1047500' => 'mdo', 'MD10G1127500' => 'mdo', 'MD10G1262300' => 'mdo', 'MD10G1293800' => 'mdo', 'MD16G1074300' => 'mdo', 'Medtr1g021670' => 'mtr', 'Medtr1g096320' => 'mtr', 'Medtr2g013690' => 'mtr', 'Medtr2g019450' => 'mtr', 'Medtr2g085170' => 'mtr', 'Medtr4g088785' => 'mtr', 'Medtr8g055930' => 'mtr', 'Medtr8g085850' => 'mtr', 'MELO3C002605.2' => 'cme', 'MELO3C003891.2' => 'cme', 'MELO3C004012.2' => 'cme', 'MELO3C007134.2' => 'cme', 'MELO3C008118.2' => 'cme', 'MELO3C016700.2' => 'cme', 'MELO3C024127.2' => 'cme', 'MELO3C033361.2' => 'cme', 'MELO3C033362.2' => 'cme', 'Migut.C00430' => 'egut', 'Migut.C01246' => 'egut', 'Migut.E00101' => 'egut', 'Migut.H01486' => 'egut', 'Migut.H01939' => 'egut', 'Migut.K00360' => 'egut', 'Migut.M00910' => 'egut', 'Migut.M01139' => 'egut', 'Migut.N02677' => 'egut', 'MSTRG.13252' => 'ama', 'MSTRG.14701' => 'ama', 'MSTRG.1521' => 'ama', 'MSTRG.15884' => 'ama', 'MSTRG.16242' => 'ama', 'MSTRG.22285' => 'ama', 'MSTRG.22444' => 'ama', 'MSTRG.2349' => 'ama', 'MSTRG.26308' => 'ama', 'MSTRG.28296' => 'ama', 'MSTRG.9895' => 'ama', 'Nitab4.5_0000110g0060' => 'nta', 'Nitab4.5_0000420g0130' => 'nta', 'Nitab4.5_0000422g0030' => 'nta', 'Nitab4.5_0000560g0180' => 'nta', 'Nitab4.5_0000703g0100' => 'nta', 'Nitab4.5_0000786g0200' => 'nta', 'Nitab4.5_0001336g0020' => 'nta', 'Nitab4.5_0001796g0030' => 'nta', 'Nitab4.5_0003348g0060' => 'nta', 'Nitab4.5_0003698g0040' => 'nta', 'Nitab4.5_0003942g0090' => 'nta', 'Nitab4.5_0004775g0070' => 'nta', 'Nitab4.5_0004864g0030' => 'nta', 'Nitab4.5_0005615g0020' => 'nta', 'Nitab4.5_0009288g0030' => 'nta', 'Nitab4.5_0009341g0010' => 'nta', 'Nitab4.5_0009535g0010' => 'nta', 'Nn1g03995' => 'nnu', 'Nn1g04100' => 'nnu', 'Nn1g06530' => 'nnu', 'Nn3g16404' => 'nnu', 'Nn3g17212' => 'nnu', 'Nn3g20776' => 'nnu', 'Nn3g21923' => 'nnu', 'Nn5g27737' => 'nnu', 'Nn5g29461' => 'nnu', 'Nn7g38355' => 'nnu', 'Nn8g39873' => 'nnu', 'Oeu000548.2' => 'oeu', 'Oeu004672.1' => 'oeu', 'Oeu015605.2' => 'oeu', 'Oeu016092.1' => 'oeu', 'Oeu017879.3' => 'oeu', 'Oeu024910.1' => 'oeu', 'Oeu028965.1' => 'oeu', 'Oeu031269.1' => 'oeu', 'Oeu031270.1' => 'oeu', 'Oeu032535.1' => 'oeu', 'Oeu034151.1' => 'oeu', 'Oeu034152.1' => 'oeu', 'Oeu034588.2' => 'oeu', 'Oeu050846.1' => 'oeu', 'Oeu050849.2' => 'oeu', 'Oeu051063.2' => 'oeu', 'Oeu052368.1' => 'oeu', 'Oeu052370.1' => 'oeu', 'Os01g0210400' => 'osa', 'Os01g0304300' => 'osa', 'Os01g0749100' => 'osa', 'Os02g0745800' => 'osa', 'Os03g0769050' => 'osa', 'Os05g0531500' => 'osa', 'Os06g0724300' => 'osa', 'Os11g0198100' => 'osa', 'Peaxi162Scf00069g01425' => 'pax', 'Peaxi162Scf00280g00811' => 'pax', 'Peaxi162Scf00310g00615' => 'pax', 'Peaxi162Scf00362g00542' => 'pax', 'Peaxi162Scf00461g00310' => 'pax', 'Peaxi162Scf00530g00118' => 'pax', 'Peaxi162Scf00541g00057' => 'pax', 'Peaxi162Scf00661g00017' => 'pax', 'Peaxi162Scf00926g00027' => 'pax', 'Peaxi162Scf01064g00263' => 'pax', 'Peaxi162Scf01211g00135' => 'pax', 'PGR004G2336' => 'pgr', 'PGR042G0327' => 'pgr', 'PGR042G1957' => 'pgr', 'PGR042G2003' => 'pgr', 'PGR042G3929' => 'pgr', 'PGR083G1137' => 'pgr', 'PGR083G1364' => 'pgr', 'PGSC0003DMG400003381' => 'stu', 'PGSC0003DMG400003417' => 'stu', 'PGSC0003DMG400008981' => 'stu', 'PGSC0003DMG400012417' => 'stu', 'PGSC0003DMG400012823' => 'stu', 'PGSC0003DMG400016885' => 'stu', 'PGSC0003DMG400022812' => 'stu', 'PGSC0003DMG400029726' => 'stu', 'PGSC0003DMG401009243' => 'stu', 'PGSC0003DMG401031505' => 'stu', 'PGSC0003DMG402031505' => 'stu', 'Phvul.001G017600' => 'pvu', 'Phvul.002G193500' => 'pvu', 'Phvul.002G228900' => 'pvu', 'Phvul.002G236800' => 'pvu', 'Phvul.003G049500' => 'pvu', 'Phvul.005G072000' => 'pvu', 'Phvul.006G164800' => 'pvu', 'Phvul.006G185100' => 'pvu', 'Phvul.007G090000' => 'pvu', 'Potri.001G399800' => 'ptr', 'Potri.002G149900' => 'ptr', 'Potri.004G044100' => 'ptr', 'Potri.004G177600' => 'ptr', 'Potri.009G138000' => 'ptr', 'Potri.010G094000' => 'ptr', 'Potri.011G053000' => 'ptr', 'Potri.011G119300' => 'ptr', 'Potri.013G113700' => 'ptr', 'Potri.018G107800' => 'ptr', 'Potri.019G084100' => 'ptr', 'Pp3c14_23720' => 'ppa', 'Pp3c16_6340' => 'ppa', 'Pp3c23_13420' => 'ppa', 'Pp3c24_2740' => 'ppa', 'Pp3c25_860' => 'ppa', 'Pp3c8_21750' => 'ppa', 'Prupe.1G273000' => 'ppe', 'Prupe.1G273700' => 'ppe', 'Prupe.1G274100' => 'ppe', 'Prupe.2G023300' => 'ppe', 'Prupe.4G048000' => 'ppe', 'Prupe.4G080400' => 'ppe', 'Prupe.4G181200' => 'ppe', 'Prupe.8G056900' => 'ppe', 'Prupe.8G168700' => 'ppe', 'Psat1g189080' => 'psa', 'Psat1g204760' => 'psa', 'Psat4g175560' => 'psa', 'Psat4g177720' => 'psa', 'Psat5g244240' => 'psa', 'Psat6g010720' => 'psa', 'Psat6g187200' => 'psa', 'Psat7g072040' => 'psa', 'PSO017G3501' => 'pso', 'PSO063G2148' => 'pso', 'PSO063G5608' => 'pso', 'PSO210G6392' => 'pso', 'PSO541G2319' => 'pso', 'PSO541G2836' => 'pso', 'PSO541G4012' => 'pso', 'PSO541G6253' => 'pso', 'PSO675G0580' => 'pso', 'PSO675G0856' => 'pso', 'PSO675G5635' => 'pso', 'PSO675G9157' => 'pso', 'PSO832G1660' => 'pso', 'PSO832G1969' => 'pso', 'QL02p007186' => 'qlo', 'QL02p033904' => 'qlo', 'QL03p064391' => 'qlo', 'QL05p040593' => 'qlo', 'QL05p058242' => 'qlo', 'QL08p021825' => 'qlo', 'QL11p004981' => 'qlo', 'RcHm_v2.0_Chr1g0318301' => 'rch', 'RcHm_v2.0_Chr4g0418501' => 'rch', 'RcHm_v2.0_Chr4g0439971' => 'rch', 'RcHm_v2.0_Chr5g0008541' => 'rch', 'RcHm_v2.0_Chr5g0014101' => 'rch', 'RcHm_v2.0_Chr5g0014131' => 'rch', 'RcHm_v2.0_Chr5g0033621' => 'rch', 'RcHm_v2.0_Chr6g0272041' => 'rch', 'RcHm_v2.0_Chr6g0278831' => 'rch', 'Rhsim02G0130400' => 'rsi', 'Rhsim02G0171100' => 'rsi', 'Rhsim05G0053000' => 'rsi', 'Rhsim05G0053100' => 'rsi', 'Rhsim06G0096500' => 'rsi', 'Rhsim06G0096600' => 'rsi', 'Rhsim06G0199100' => 'rsi', 'Rhsim12G0062300' => 'rsi', 'Rhsim12G0062800' => 'rsi', 'Sabra02G0118600' => 'sbr', 'Sabra04G0027300' => 'sbr', 'Sabra04G0119500' => 'sbr', 'Sabra08G0112500' => 'sbr', 'Sabra11G0036800' => 'sbr', 'Sabra11G0103800' => 'sbr', 'Sabra13G0096300' => 'sbr', 'Sabra16G0262300' => 'sbr', 'Sabra18G0091700' => 'sbr', 'Sabra19G0095400' => 'sbr', 'SalBow6G3080' => 'sbo', 'SalBow7G1157' => 'sbo', 'SalBow7G2123' => 'sbo', 'SalBow7G2285' => 'sbo', 'SalBow7G3537' => 'sbo', 'SalBow8G2947' => 'sbo', 'SalBow8G4463' => 'sbo', 'SalBow8G5466' => 'sbo', 'Sc01g0001750' => 'sci', 'Sc02g0006640' => 'sci', 'Sc02g0006670' => 'sci', 'Sc04g0008220' => 'sci', 'Sc05g0006190' => 'sci', 'Sc08g0002760' => 'sci', 'Sc17g0006170' => 'sci', 'Sc22g0002050' => 'sci', 'Sc23g0001190' => 'sci', 'Sc24g0000980' => 'sci', 'Sed0006245' => 'sed', 'Sed0007543' => 'sed', 'Sed0009411' => 'sed', 'Sed0010765' => 'sed', 'Sed0012944' => 'sed', 'Sed0014682' => 'sed', 'Sed0016174' => 'sed', 'Sed0016796' => 'sed', 'Sed0020317' => 'sed', 'Sed0021467' => 'sed', 'SEGI_01316' => 'sgi', 'SEGI_03374' => 'sgi', 'SEGI_16265' => 'sgi', 'SEGI_18569' => 'sgi', 'SEGI_20351' => 'sgi', 'SEGI_26395' => 'sgi', 'SEGI_29469' => 'sgi', 'SEGI_34771' => 'sgi', 'SEGI_36769' => 'sgi', 'SEGI_37139' => 'sgi', 'SGA_v2.0_scaffold100G29687' => 'sas', 'SGA_v2.0_scaffold118G32472' => 'sas', 'SGA_v2.0_scaffold14G07051' => 'sas', 'SGA_v2.0_scaffold183G39845' => 'sas', 'SGA_v2.0_scaffold1G00174' => 'sas', 'SGA_v2.0_scaffold22G09714' => 'sas', 'SGA_v2.0_scaffold333G48992' => 'sas', 'SGA_v2.0_scaffold46G17491' => 'sas', 'SGA_v2.0_scaffold49G18294' => 'sas', 'SGA_v2.0_scaffold63G21658' => 'sas', 'SHI01741' => 'shi', 'SHI05771' => 'shi', 'SHI18077' => 'shi', 'SHI20525' => 'shi', 'SHI20527' => 'shi', 'SHI20528' => 'shi', 'SMO172G0185' => 'smo', 'SMO198G0020' => 'smo', 'SMO351G0006' => 'smo', 'SMO356G0118' => 'smo', 'SMO358G0296' => 'smo', 'SMO367G0079' => 'smo', 'SMO367G1277' => 'smo', 'Solyc01g014220.3' => 'sly', 'Solyc01g111770.2' => 'sly', 'Solyc02g078180.3' => 'sly', 'Solyc03g006430.3' => 'sly', 'Solyc03g006456.1' => 'sly', 'Solyc03g079860.2' => 'sly', 'Solyc04g079770.3' => 'sly', 'Solyc05g007430.4' => 'sly', 'Solyc07g063150.3' => 'sly', 'Solyc08g016620.3' => 'sly', 'Solyc09g057590.3' => 'sly', 'Solyc09g057600.1' => 'sly', 'Solyc10g009050.3' => 'sly', 'Solyc11g017420.2' => 'sly', 'Sopen01g053810' => 'spe', 'Sopen02g023040' => 'spe', 'Sopen03g002440' => 'spe', 'Sopen04g033350' => 'spe', 'Sopen05g003310' => 'spe', 'Sopen07g004050' => 'spe', 'Sopen07g031340' => 'spe', 'Sopen08g006990' => 'spe', 'Sopen10g004830' => 'spe', 'Sopen11g009370' => 'spe', 'Sp1g24450' => 'spa', 'Sp1g29670' => 'spa', 'Sp1g39600' => 'spa', 'Sp2g11080' => 'spa', 'Sp2g13970' => 'spa', 'Sp4g16130' => 'spa', 'Sp6g13080' => 'spa', 'Sp7g37270' => 'spa', 'TAR371G0065' => 'tar', 'TAR376G0340' => 'tar', 'TAR376G0435' => 'tar', 'TAR381G0002' => 'tar', 'TAR381G1236' => 'tar', 'TAR624G0055' => 'tar', 'TAR624G0324' => 'tar', 'TAR624G0696' => 'tar', 'TAR624G0906' => 'tar', 'TAR625G0107' => 'tar', 'TAR626G0015' => 'tar', 'TAR626G1356' => 'tar', 'TAR627G0888' => 'tar', 'TAR628G0399' => 'tar', 'TAR628G1327' => 'tar', 'TAR629G2831' => 'tar', 'TAR629G2874' => 'tar', 'TAR633G1432' => 'tar', 'TAR633G2771' => 'tar', 'THA.LOC104803394' => 'tha', 'THA.LOC104805153' => 'tha', 'THA.LOC104806784' => 'tha', 'THA.LOC104810473' => 'tha', 'THA.LOC104813100' => 'tha', 'THA.LOC104814215' => 'tha', 'THA.LOC104815554' => 'tha', 'THA.LOC104820544' => 'tha', 'THA.LOC104824754' => 'tha', 'THA.LOC104827717' => 'tha', 'Thecc.02G031400' => 'tca', 'Thecc.02G055900' => 'tca', 'Thecc.02G350800' => 'tca', 'Thecc.06G150900' => 'tca', 'Thecc.06G186600' => 'tca', 'Thecc.07G089600' => 'tca', 'Thecc.08G020400' => 'tca', 'Thecc.08G182100' => 'tca', 'Thhalv10000873m.g' => 'esa', 'Thhalv10004185m.g' => 'esa', 'Thhalv10006981m.g' => 'esa', 'Thhalv10007204m.g' => 'esa', 'Thhalv10011374m.g' => 'esa', 'Thhalv10013482m.g' => 'esa', 'Thhalv10017801m.g' => 'esa', 'Thhalv10024983m.g' => 'esa', 'TPR.G12072' => 'tpr', 'TPR.G15769' => 'tpr', 'TPR.G16504' => 'tpr', 'TPR.G16506' => 'tpr', 'TPR.G24345' => 'tpr', 'TPR.G26666' => 'tpr', 'TPR.G27320' => 'tpr', 'TPR.G31819' => 'tpr', 'TPR.G38879' => 'tpr', 'TPR.G39015' => 'tpr', 'TPR.G8819' => 'tpr', 'TWI09G0924' => 'twi', 'TWI12G0811' => 'twi', 'TWI12G1294' => 'twi', 'TWI31G0150' => 'twi', 'TWI36G1262' => 'twi', 'TWI38G1287' => 'twi', 'TWI38G1633' => 'twi', 'TWI38G1982' => 'twi', 'TWI39G0116' => 'twi', 'TWI60G1011' => 'twi', 'TWI63G0171' => 'twi', 'TWI73G0839' => 'twi', 'TWI79G1511' => 'twi', 'unitig_0.g915' => 'ugi', 'unitig_0.g916' => 'ugi', 'unitig_21.g20219' => 'ugi', 'unitig_21.g20416' => 'ugi', 'unitig_578.g16132' => 'ugi', 'unitig_578.g16718' => 'ugi', 'unitig_62.g23481' => 'ugi', 'unitig_744.g24535' => 'ugi', 'unitig_749.g13525' => 'ugi', 'vmacro01248' => 'vma', 'vmacro02290' => 'vma', 'vmacro10946' => 'vma', 'vmacro11865' => 'vma', 'vmacro12493' => 'vma', 'vmacro17322' => 'vma', 'vmacro21599' => 'vma', 'vmacro23041' => 'vma', 'VMungo0251G0004' => 'vmu', 'VMungo0251G2639' => 'vmu', 'VMungo0251G2967' => 'vmu', 'VMungo0540G0864' => 'vmu', 'VMungo0540G1569' => 'vmu', 'VMungo0647G0317' => 'vmu', 'VMungo0720G1373' => 'vmu', 'VMungo0720G1508' => 'vmu', 'VMungo1080G0485' => 'vmu', 'VMungo1215G3177' => 'vmu', 'Zm00001eb112600' => 'zma', 'Zm00001eb120220' => 'zma', 'Zm00001eb153240' => 'zma', 'Zm00001eb168880' => 'zma', 'Zm00001eb213920' => 'zma', 'Zm00001eb228280' => 'zma', 'Zm00001eb254580' => 'zma', 'Zm00001eb272180' => 'zma', 'Zm00001eb293190' => 'zma', 'Zm00001eb322930' => 'zma', 'Zm00001eb353360' => 'zma', 'Zm00001eb353390' => 'zma', 'Zm00001eb353430' => 'zma', 'Zm00001eb353440' => 'zma', 'Zm00001eb353780' => 'zma' ), 'gf_id' => 'HOM05D000499', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000499' ), 'data_identifier' => 'HOM05D000499', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000499', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1066', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p29780' => 'bna', 'A02p33180' => 'bna', 'A03p16470' => 'bna', 'A03p66010' => 'bna', 'A04p25970' => 'bna', 'A06p01270' => 'bna', 'A06p46080' => 'bna', 'A07p11400' => 'bna', 'A08p01840' => 'bna', 'A08p08230' => 'bna', 'A08p25740' => 'bna', 'A09p32070' => 'bna', 'A09p37830' => 'bna', 'A09p42840' => 'bna', 'A09p42850' => 'bna', 'Aa31LG10G2060' => 'aar', 'Aa31LG2G7410' => 'aar', 'Aa31LG6G10200' => 'aar', 'Aa31LG6G16680' => 'aar', 'Aa31LG6G8470' => 'aar', 'Aa31LG9G12730' => 'aar', 'Aa31LG9G13680' => 'aar', 'Aa31LG9G14920' => 'aar', 'Aa31LG9G6650' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4977' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5467' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3254' => 'aag', 'Actinidia02578' => 'ach', 'Actinidia07693' => 'ach', 'Actinidia08413' => 'ach', 'Actinidia08414' => 'ach', 'Actinidia15289' => 'ach', 'Actinidia19871' => 'ach', 'Actinidia21475' => 'ach', 'Actinidia22576' => 'ach', 'Actinidia28327' => 'ach', 'Actinidia32491' => 'ach', 'Actinidia39463' => 'ach', 'Actinidia39571' => 'ach', 'Ah.01g013750' => 'amhyb', 'Ah.01g023210' => 'amhyb', 'Ah.04g164850' => 'amhyb', 'Ah.05g178060' => 'amhyb', 'Ah.07g204270' => 'amhyb', 'Ah.07g208480' => 'amhyb', 'Ah.09g237410' => 'amhyb', 'Ah.14g089460' => 'amhyb', 'AL1G41790' => 'aly', 'AL1G49050' => 'aly', 'AL1G53810' => 'aly', 'AL1G61400' => 'aly', 'AL4G18580' => 'aly', 'AL5G12510' => 'aly', 'AL5G12540' => 'aly', 'AL6G43230' => 'aly', 'AL7G10370' => 'aly', 'AL7G19250' => 'aly', 'AL8G12240' => 'aly', 'AL8G18540' => 'aly', 'Aqoxy1G02409' => 'aox', 'Aqoxy2G03993' => 'aox', 'Aqoxy3G03357' => 'aox', 'Aqoxy4G00785' => 'aox', 'Aqoxy5G02598' => 'aox', 'Aqoxy6G00132' => 'aox', 'Aqoxy7G01776' => 'aox', 'Aqoxy7G02316' => 'aox', 'Aqoxy7G03973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.12AFKW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B8730' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27IQR1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3F75VG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3RE0GA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41TCQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.527VTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FIR39' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5W8UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DA38EV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ63HS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H1I32C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HC27T5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4M8AP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7N3CZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9UVDZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LS1NQA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT1D4B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SKC4TM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCFV76' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF9Q1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQWD9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1ZM88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WE07RT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YCK7VH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJE6Q6' => 'arhy', 'AT1G28240' => 'ath', 'AT1G34550' => 'ath', 'AT1G53040' => 'ath', 'AT2G02910' => 'ath', 'AT4G09630' => 'ath', 'AT4G38500' => 'ath', 'AT5G42660' => 'ath', 'AT5G46220' => 'ath', 'ATR0152G026' => 'atr', 'ATR0564G343' => 'atr', 'ATR0706G151' => 'atr', 'ATR0733G207' => 'atr', 'ATR0751G234' => 'atr', 'ATR0807G048' => 'atr', 'ATR1091G084' => 'atr', 'Atru.chr10.1229' => 'acertr', 'Atru.chr10.1230' => 'acertr', 'Atru.chr10.1874' => 'acertr', 'Atru.chr11.1808' => 'acertr', 'Atru.chr13.1795' => 'acertr', 'Atru.chr13.570' => 'acertr', 'Atru.chr2.2608' => 'acertr', 'Atru.chr2.2609' => 'acertr', 'Atru.chr5.3428' => 'acertr', 'Atru.chr8.1171' => 'acertr', 'AUR62004651' => 'cqu', 'AUR62008675' => 'cqu', 'AUR62010014' => 'cqu', 'AUR62013004' => 'cqu', 'AUR62014825' => 'cqu', 'AUR62015015' => 'cqu', 'AUR62015151' => 'cqu', 'AUR62017020' => 'cqu', 'AUR62019422' => 'cqu', 'AUR62023570' => 'cqu', 'AUR62025571' => 'cqu', 'AUR62029098' => 'cqu', 'AUR62033863' => 'cqu', 'AUR62034296' => 'cqu', 'AUR62040075' => 'cqu', 'BcaB02g07334' => 'bca', 'BcaB02g10575' => 'bca', 'BcaB03g12119' => 'bca', 'BcaB03g12120' => 'bca', 'BcaB03g13945' => 'bca', 'BcaB04g17123' => 'bca', 'BcaB04g17867' => 'bca', 'BcaB04g19839' => 'bca', 'BcaB07g30317' => 'bca', 'BcaB07g32432' => 'bca', 'BcaB07g33362' => 'bca', 'BcaB08g36611' => 'bca', 'BcaC01g00028' => 'bca', 'BcaC01g01356' => 'bca', 'BcaC01g02034' => 'bca', 'BcaC01g06051' => 'bca', 'BcaC03g16839' => 'bca', 'BcaC03g17176' => 'bca', 'BcaC05g26829' => 'bca', 'BcaC06g31490' => 'bca', 'BcaC06g35344' => 'bca', 'BcaC06g36570' => 'bca', 'BcaC07g37537' => 'bca', 'BcaC08g43491' => 'bca', 'BcaC08g43773' => 'bca', 'BcaNung00234' => 'bca', 'BcaNung01982' => 'bca', 'BcaNung03707' => 'bca', 'BcaNung06454' => 'bca', 'BolC2t10762H' => 'bol', 'BolC2t11191H' => 'bol', 'BolC3t14322H' => 'bol', 'BolC3t19747H' => 'bol', 'BolC3t21425H' => 'bol', 'BolC4t27800H' => 'bol', 'BolC5t31423H' => 'bol', 'BolC6t35951H' => 'bol', 'BolC6t36282H' => 'bol', 'BolC7t40678H' => 'bol', 'BolC7t40679H' => 'bol', 'BolC7t42222H' => 'bol', 'BolC7t43492H' => 'bol', 'BolC7t46785H' => 'bol', 'BolC8t47853H' => 'bol', 'BolC9t56805H' => 'bol', 'BraA02t08000Z' => 'bra', 'BraA02t08341Z' => 'bra', 'BraA03t10936Z' => 'bra', 'BraA03t15657Z' => 'bra', 'BraA04t18100Z' => 'bra', 'BraA05t20523Z' => 'bra', 'BraA06t23353Z' => 'bra', 'BraA06t27473Z' => 'bra', 'BraA06t27769Z' => 'bra', 'BraA07t28928Z' => 'bra', 'BraA08t32236Z' => 'bra', 'BraA08t32841Z' => 'bra', 'BraA08t34524Z' => 'bra', 'BraA09t38742Z' => 'bra', 'BraA09t39295Z' => 'bra', 'C02p47180' => 'bna', 'C02p50990' => 'bna', 'C03p19360' => 'bna', 'C03p74950' => 'bna', 'C03p91000' => 'bna', 'C04p63260' => 'bna', 'C05p27050' => 'bna', 'C06p08750' => 'bna', 'C06p11490' => 'bna', 'C07p02820' => 'bna', 'C07p17180' => 'bna', 'C07p29440' => 'bna', 'C07p63730' => 'bna', 'C09p39260' => 'bna', 'CAN.G1164.34' => 'can', 'CAN.G1164.39' => 'can', 'CAN.G1530.3' => 'can', 'CAN.G162.61' => 'can', 'CAN.G176.6' => 'can', 'CAN.G289.49' => 'can', 'CAN.G370.21' => 'can', 'CAN.G370.22' => 'can', 'CAN.G371.117' => 'can', 'CAN.G58.37' => 'can', 'CAN.G588.98' => 'can', 'CANSAT21G2266' => 'cansat', 'CANSAT25G2799' => 'cansat', 'CANSAT35G0862' => 'cansat', 'CANSAT35G1704' => 'cansat', 'CANSAT35G1760' => 'cansat', 'CANSAT56G3971' => 'cansat', 'CANSAT56G4116' => 'cansat', 'CANSAT80G1259' => 'cansat', 'CARHR027730' => 'chi', 'CARHR033880' => 'chi', 'CARHR043270' => 'chi', 'CARHR145330' => 'chi', 'CARHR145340' => 'chi', 'CARHR175570' => 'chi', 'CARHR181570' => 'chi', 'CARHR258470' => 'chi', 'CARHR260490' => 'chi', 'CARHR294220' => 'chi', 'Carub.0001s2668' => 'cru', 'Carub.0001s3257' => 'cru', 'Carub.0001s4220' => 'cru', 'Carub.0005s0179' => 'cru', 'Carub.0006s2807' => 'cru', 'Carub.0007s0039' => 'cru', 'Carub.0008s0169' => 'cru', 'Carub.0008s0636' => 'cru', 'Ca_00338_v3' => 'car', 'Ca_00542_v3' => 'car', 'Ca_01844_v3' => 'car', 'Ca_10611_v3' => 'car', 'Ca_13326_v3' => 'car', 'Ca_17944_v3' => 'car', 'Ca_18546_v3' => 'car', 'Ca_24219_v3' => 'car', 'Ca_29972_v3' => 'car', 'CBR_g3681' => 'cbr', 'CBR_g40021' => 'cbr', 'Cc01_g08140' => 'ccan', 'Cc02_g13410' => 'ccan', 'Cc02_g37480' => 'ccan', 'Cc05_g12030' => 'ccan', 'Cc09_g03370' => 'ccan', 'Cc09_g10300' => 'ccan', 'Cc10_g03530' => 'ccan', 'Cc10_g11380' => 'ccan', 'CDE01G0176' => 'cde', 'CDE02G0675' => 'cde', 'CDE02G0942' => 'cde', 'CDE02G1153' => 'cde', 'CDE02G4177' => 'cde', 'CDE04G2117' => 'cde', 'CDE04G2736' => 'cde', 'CDE08G1161' => 'cde', 'CDE09G1238' => 'cde', 'Cfa000467' => 'cfa', 'Cfa000947' => 'cfa', 'Cfa004969' => 'cfa', 'Cfa005284' => 'cfa', 'Cfa008993' => 'cfa', 'Cfa018187' => 'cfa', 'Cfa018454' => 'cfa', 'Cfa020585' => 'cfa', 'Ciclev10000424m.g' => 'ccl', 'Ciclev10003605m.g' => 'ccl', 'Ciclev10007828m.g' => 'ccl', 'Ciclev10014620m.g' => 'ccl', 'Ciclev10015169m.g' => 'ccl', 'Ciclev10018291m.g' => 'ccl', 'Ciclev10028256m.g' => 'ccl', 'Ciclev10033822m.g' => 'ccl', 'CiPaw.05G060300' => 'cil', 'CiPaw.05G085000' => 'cil', 'CiPaw.06G083700' => 'cil', 'CiPaw.06G120300' => 'cil', 'CiPaw.09G060500' => 'cil', 'CiPaw.09G123800' => 'cil', 'CiPaw.11G169700' => 'cil', 'CiPaw.12G118300' => 'cil', 'CiPaw.15G071000' => 'cil', 'CiPaw.15G081900' => 'cil', 'ClCG01G024610' => 'cla', 'ClCG03G006070' => 'cla', 'ClCG05G019250' => 'cla', 'ClCG09G009500' => 'cla', 'ClCG11G008200' => 'cla', 'ClCG11G018080' => 'cla', 'COL.COLO4_17373' => 'col', 'COL.COLO4_22994' => 'col', 'COL.COLO4_26389' => 'col', 'COL.COLO4_27170' => 'col', 'COL.COLO4_31074' => 'col', 'COL.COLO4_31465' => 'col', 'COL.COLO4_36438' => 'col', 'COL.COLO4_36439' => 'col', 'Cpa.g.c38781' => 'cpa', 'Cpa.g.sc128.12' => 'cpa', 'Cpa.g.sc166.7' => 'cpa', 'Cpa.g.sc166.8' => 'cpa', 'Cpa.g.sc20.111' => 'cpa', 'Cpa.g.sc27.31' => 'cpa', 'Cpa.g.sc64.36' => 'cpa', 'Cpa.g.sc64.37' => 'cpa', 'Cpa.g.sc66.49' => 'cpa', 'Cpa.g.sc80.64' => 'cpa', 'CsaV3_1G012320' => 'csa', 'CsaV3_2G008480' => 'csa', 'CsaV3_2G033450' => 'csa', 'CsaV3_3G044830' => 'csa', 'CsaV3_4G033710' => 'csa', 'CsaV3_6G051730' => 'csa', 'CsaV3_7G025350' => 'csa', 'CSS0001067' => 'camsi', 'CSS0005996' => 'camsi', 'CSS0006590' => 'camsi', 'CSS0009673' => 'camsi', 'CSS0010201' => 'camsi', 'CSS0010549' => 'camsi', 'CSS0011364' => 'camsi', 'CSS0014473' => 'camsi', 'CSS0014961' => 'camsi', 'CSS0020191' => 'camsi', 'CSS0021165' => 'camsi', 'CSS0022306' => 'camsi', 'CSS0030591' => 'camsi', 'CSS0030696' => 'camsi', 'CSS0032653' => 'camsi', 'CSS0037487' => 'camsi', 'CSS0041102' => 'camsi', 'CSS0041261' => 'camsi', 'CSS0046246' => 'camsi', 'CSS0049256' => 'camsi', 'DCAR_004075' => 'dca', 'DCAR_011538' => 'dca', 'DCAR_019553' => 'dca', 'DCAR_020952' => 'dca', 'DCAR_021739' => 'dca', 'DCAR_027407' => 'dca', 'DCAR_027913' => 'dca', 'DCAR_028066' => 'dca', 'Dinv05899' => 'din', 'Dinv07563' => 'din', 'Dinv08010' => 'din', 'Dinv14125' => 'din', 'Dinv20172' => 'din', 'Dinv30743' => 'din', 'Dinv31229' => 'din', 'Dinv34162' => 'din', 'Dinv36028' => 'din', 'Dinv39368' => 'din', 'Dinv40565' => 'din', 'Dinv41706' => 'din', 'Duzib052G0089' => 'dzi', 'Duzib116G0641' => 'dzi', 'Duzib132G0069' => 'dzi', 'Duzib132G1219' => 'dzi', 'Duzib147G0278' => 'dzi', 'Duzib160G0480' => 'dzi', 'Duzib170G0661' => 'dzi', 'Duzib177G0591' => 'dzi', 'Duzib187G1353' => 'dzi', 'Duzib192G0858' => 'dzi', 'Duzib192G0883' => 'dzi', 'Duzib213G0506' => 'dzi', 'Duzib235G0289' => 'dzi', 'Duzib251G0422' => 'dzi', 'ECA232G3898' => 'eca', 'ECA233G5950' => 'eca', 'ECA234G1699' => 'eca', 'ECA234G2421' => 'eca', 'ECA236G0426' => 'eca', 'ECA236G4331' => 'eca', 'ECA248G2573' => 'eca', 'EL10Ac1g00077' => 'bvu', 'EL10Ac1g01746' => 'bvu', 'EL10Ac2g03464' => 'bvu', 'EL10Ac4g08176' => 'bvu', 'EL10Ac7g17521' => 'bvu', 'EL10Ac8g20386' => 'bvu', 'EL10Ac9g21343' => 'bvu', 'EL10Ac9g22688' => 'bvu', 'Eucgr.B03434' => 'egr', 'Eucgr.D00618' => 'egr', 'Eucgr.E02395' => 'egr', 'Eucgr.F01129' => 'egr', 'Eucgr.F02622' => 'egr', 'Eucgr.F04207' => 'egr', 'FAN01G0570' => 'fan', 'FAN03G3351' => 'fan', 'FAN06G3702' => 'fan', 'FAN07G2149' => 'fan', 'FAN10G3758' => 'fan', 'FAN11G1170' => 'fan', 'FAN11G2050' => 'fan', 'FAN11G2724' => 'fan', 'FAN12G1700' => 'fan', 'FAN12G2028' => 'fan', 'FAN15G1160' => 'fan', 'FAN15G3063' => 'fan', 'FAN16G2540' => 'fan', 'FAN16G3077' => 'fan', 'FAN16G3624' => 'fan', 'FAN17G0221' => 'fan', 'FAN20G2492' => 'fan', 'FAN20G2905' => 'fan', 'FAN21G0548' => 'fan', 'FAN21G1300' => 'fan', 'FAN22G0077' => 'fan', 'FAN22G1315' => 'fan', 'FAN24G1280' => 'fan', 'FAN24G1445' => 'fan', 'FAN24G3527' => 'fan', 'FAN25G0464' => 'fan', 'FAN25G2885' => 'fan', 'FAN25G3270' => 'fan', 'FAN27G1101' => 'fan', 'FAN27G2846' => 'fan', 'FAN27G3524' => 'fan', 'FvH4_2g11770' => 'fve', 'FvH4_2g15630' => 'fve', 'FvH4_3g05570' => 'fve', 'FvH4_3g09110' => 'fve', 'FvH4_3g19940' => 'fve', 'FvH4_4g04821' => 'fve', 'FvH4_4g31480' => 'fve', 'FvH4_7g01740' => 'fve', 'Glyma.05G130400' => 'gma', 'Glyma.05G156400' => 'gma', 'Glyma.07G197000' => 'gma', 'Glyma.08G085151' => 'gma', 'Glyma.08G114500' => 'gma', 'Glyma.08G300400' => 'gma', 'Glyma.10G215800' => 'gma', 'Glyma.12G224400' => 'gma', 'Glyma.13G179300' => 'gma', 'Glyma.13G218151' => 'gma', 'Glyma.13G238800' => 'gma', 'Glyma.13G276900' => 'gma', 'Glyma.14G078200' => 'gma', 'Glyma.15G074500' => 'gma', 'Glyma.15G094100' => 'gma', 'Glyma.17G247200' => 'gma', 'Glyma.18G120100' => 'gma', 'Glyma.20G176000' => 'gma', 'Gohir.A01G063600' => 'ghi', 'Gohir.A01G170301' => 'ghi', 'Gohir.A02G060500' => 'ghi', 'Gohir.A05G133850' => 'ghi', 'Gohir.A05G161400' => 'ghi', 'Gohir.A06G012900' => 'ghi', 'Gohir.A06G035901' => 'ghi', 'Gohir.A06G127100' => 'ghi', 'Gohir.A06G210500' => 'ghi', 'Gohir.A08G008650' => 'ghi', 'Gohir.A09G072700' => 'ghi', 'Gohir.A09G088301' => 'ghi', 'Gohir.A10G040600' => 'ghi', 'Gohir.A12G036300' => 'ghi', 'Gohir.A12G143350' => 'ghi', 'Gohir.A12G165500' => 'ghi', 'Gohir.A13G145700' => 'ghi', 'Gohir.D01G050000' => 'ghi', 'Gohir.D01G051366' => 'ghi', 'Gohir.D01G161350' => 'ghi', 'Gohir.D02G065900' => 'ghi', 'Gohir.D05G164200' => 'ghi', 'Gohir.D05G355500' => 'ghi', 'Gohir.D06G010400' => 'ghi', 'Gohir.D06G111250' => 'ghi', 'Gohir.D06G132000' => 'ghi', 'Gohir.D06G210500' => 'ghi', 'Gohir.D07G165675' => 'ghi', 'Gohir.D08G062240' => 'ghi', 'Gohir.D08G086101' => 'ghi', 'Gohir.D08G138060' => 'ghi', 'Gohir.D09G072300' => 'ghi', 'Gohir.D10G041400' => 'ghi', 'Gohir.D11G191020' => 'ghi', 'Gohir.D11G212066' => 'ghi', 'Gohir.D12G036300' => 'ghi', 'Gohir.D12G168600' => 'ghi', 'Gohir.D13G150600' => 'ghi', 'Gorai.001G057300' => 'gra', 'Gorai.002G069900' => 'gra', 'Gorai.002G200000' => 'gra', 'Gorai.003G067600' => 'gra', 'Gorai.005G074800' => 'gra', 'Gorai.006G087300' => 'gra', 'Gorai.008G037500' => 'gra', 'Gorai.008G181400' => 'gra', 'Gorai.009G169400' => 'gra', 'Gorai.009G387900' => 'gra', 'Gorai.010G013300' => 'gra', 'Gorai.010G153800' => 'gra', 'Gorai.010G255800' => 'gra', 'Gorai.011G043700' => 'gra', 'Gorai.011G198900' => 'gra', 'Gorai.013G168400' => 'gra', 'GSVIVG01005212001' => 'vvi', 'GSVIVG01006163001' => 'vvi', 'GSVIVG01009625001' => 'vvi', 'GSVIVG01014338001' => 'vvi', 'GSVIVG01020005001' => 'vvi', 'GSVIVG01021450001' => 'vvi', 'GSVIVG01023975001' => 'vvi', 'GSVIVG01034490001' => 'vvi', 'HanXRQChr04g0112071' => 'han', 'HanXRQChr05g0131151' => 'han', 'HanXRQChr09g0262371' => 'han', 'HanXRQChr09g0268401' => 'han', 'HanXRQChr10g0279241' => 'han', 'HanXRQChr10g0297961' => 'han', 'HanXRQChr11g0326231' => 'han', 'HanXRQChr11g0328471' => 'han', 'HanXRQChr16g0507941' => 'han', 'HanXRQChr17g0560211' => 'han', 'Haze_02108' => 'cav', 'Haze_02428' => 'cav', 'Haze_05593' => 'cav', 'Haze_06448' => 'cav', 'Haze_09427' => 'cav', 'Haze_12022' => 'cav', 'Haze_17612' => 'cav', 'Haze_17928' => 'cav', 'Hma1.2p1_0032F.1_g019250' => 'hma', 'Hma1.2p1_0163F.1_g072690' => 'hma', 'Hma1.2p1_0265F.1_g106710' => 'hma', 'Hma1.2p1_0286F.1_g113970' => 'hma', 'Hma1.2p1_0363F.1_g136640' => 'hma', 'Hma1.2p1_0584F.1_g183470' => 'hma', 'Hma1.2p1_0885F.1_g232570' => 'hma', 'HPP92_006022' => 'vpl', 'HPP92_007320' => 'vpl', 'HPP92_011521' => 'vpl', 'HPP92_019387' => 'vpl', 'HPP92_024038' => 'vpl', 'Hund05891' => 'sun', 'Hund06450' => 'sun', 'Hund12053' => 'sun', 'Hund16800' => 'sun', 'Hund21222' => 'sun', 'Hund22896' => 'sun', 'Hund23746' => 'sun', 'Hund27083' => 'sun', 'Lalb_Chr02g0141831' => 'lal', 'Lalb_Chr02g0141841' => 'lal', 'Lalb_Chr05g0220411' => 'lal', 'Lalb_Chr06g0162081' => 'lal', 'Lalb_Chr09g0327651' => 'lal', 'Lalb_Chr13g0295051' => 'lal', 'Lalb_Chr15g0086801' => 'lal', 'Lalb_Chr16g0383781' => 'lal', 'Lalb_Chr16g0383791' => 'lal', 'Lalb_Chr18g0055441' => 'lal', 'Lalb_Chr18g0059611' => 'lal', 'Lalb_Chr20g0109661' => 'lal', 'Lalb_Chr20g0109831' => 'lal', 'Lalb_Chr20g0121871' => 'lal', 'Lalb_Chr22g0355361' => 'lal', 'Lalb_Chr25g0286371' => 'lal', 'Lj1A1187G43' => 'lonja', 'Lj1A1205T50' => 'lonja', 'Lj1A800G33' => 'lonja', 'Lj1C1187T7' => 'lonja', 'Lj1C843T11' => 'lonja', 'Lj1g0010940' => 'lja', 'Lj2A288T69' => 'lonja', 'Lj3g0024276' => 'lja', 'Lj4A47T76' => 'lonja', 'Lj4g0005805' => 'lja', 'Lj4g0006097' => 'lja', 'Lj4g0008528' => 'lja', 'Lj4g0024907' => 'lja', 'Lj5g0012472' => 'lja', 'Lj5g0018648' => 'lja', 'Lj6C789G1' => 'lonja', 'Lj6g0004000' => 'lja', 'Lj7A292G67' => 'lonja', 'Lj7A292T64' => 'lonja', 'Lj9A400T58' => 'lonja', 'Lsat_1_v5_gn_1_126181' => 'lsa', 'Lsat_1_v5_gn_4_123041' => 'lsa', 'Lsat_1_v5_gn_4_133620' => 'lsa', 'Lsat_1_v5_gn_4_53221' => 'lsa', 'Lsat_1_v5_gn_4_71961' => 'lsa', 'Lsat_1_v5_gn_7_105241' => 'lsa', 'Lsat_1_v5_gn_7_21361' => 'lsa', 'Lsat_1_v5_gn_7_28860' => 'lsa', 'Lsat_1_v5_gn_7_31260' => 'lsa', 'Lsat_1_v5_gn_8_52801' => 'lsa', 'Manes.02G191400' => 'mes', 'Manes.03G110100' => 'mes', 'Manes.04G071100' => 'mes', 'Manes.05G100500' => 'mes', 'Manes.05G164700' => 'mes', 'Manes.15G087000' => 'mes', 'Manes.15G121500' => 'mes', 'Manes.16G028300' => 'mes', 'Manes.17G046100' => 'mes', 'Manes.17G069800' => 'mes', 'Manes.18G100500' => 'mes', 'Mapoly0002s0109' => 'mpo', 'Mapoly0024s0007' => 'mpo', 'Mapoly0089s0032' => 'mpo', 'MBI04_g42241_MAGBIO' => 'mbi', 'MBI05_g11988_MAGBIO' => 'mbi', 'MBI05_g35452_MAGBIO' => 'mbi', 'MBI07_g30179_MAGBIO' => 'mbi', 'MBI07_g35859_MAGBIO' => 'mbi', 'MBI07_g35860_MAGBIO' => 'mbi', 'MBI07_g37166_MAGBIO' => 'mbi', 'MBI08_g18172_MAGBIO' => 'mbi', 'MBI09_g08441_MAGBIO' => 'mbi', 'MBI13_g01676_MAGBIO' => 'mbi', 'MBI14_g42955_MAGBIO' => 'mbi', 'MBI16_g13161_MAGBIO' => 'mbi', 'MBI17_g27204_MAGBIO' => 'mbi', 'MBI19_g21595_MAGBIO' => 'mbi', 'MD00G1148400' => 'mdo', 'MD02G1301200' => 'mdo', 'MD03G1227800' => 'mdo', 'MD05G1041100' => 'mdo', 'MD05G1124800' => 'mdo', 'MD05G1284000' => 'mdo', 'MD05G1338800' => 'mdo', 'MD05G1338900' => 'mdo', 'MD07G1022800' => 'mdo', 'MD10G1047500' => 'mdo', 'MD10G1127500' => 'mdo', 'MD10G1262300' => 'mdo', 'MD10G1293800' => 'mdo', 'MD16G1074300' => 'mdo', 'Medtr1g021670' => 'mtr', 'Medtr1g096320' => 'mtr', 'Medtr2g013690' => 'mtr', 'Medtr2g019450' => 'mtr', 'Medtr2g085170' => 'mtr', 'Medtr4g088785' => 'mtr', 'Medtr8g055930' => 'mtr', 'Medtr8g085850' => 'mtr', 'MELO3C002605.2' => 'cme', 'MELO3C003891.2' => 'cme', 'MELO3C004012.2' => 'cme', 'MELO3C007134.2' => 'cme', 'MELO3C008118.2' => 'cme', 'MELO3C016700.2' => 'cme', 'MELO3C024127.2' => 'cme', 'MELO3C033361.2' => 'cme', 'MELO3C033362.2' => 'cme', 'Migut.C00430' => 'egut', 'Migut.C01246' => 'egut', 'Migut.E00101' => 'egut', 'Migut.H01486' => 'egut', 'Migut.H01939' => 'egut', 'Migut.K00360' => 'egut', 'Migut.M00910' => 'egut', 'Migut.M01139' => 'egut', 'Migut.N02677' => 'egut', 'MSTRG.13252' => 'ama', 'MSTRG.14701' => 'ama', 'MSTRG.1521' => 'ama', 'MSTRG.15884' => 'ama', 'MSTRG.16242' => 'ama', 'MSTRG.22285' => 'ama', 'MSTRG.22444' => 'ama', 'MSTRG.2349' => 'ama', 'MSTRG.26308' => 'ama', 'MSTRG.28296' => 'ama', 'MSTRG.9895' => 'ama', 'Nitab4.5_0000110g0060' => 'nta', 'Nitab4.5_0000420g0130' => 'nta', 'Nitab4.5_0000422g0030' => 'nta', 'Nitab4.5_0000560g0180' => 'nta', 'Nitab4.5_0000703g0100' => 'nta', 'Nitab4.5_0000786g0200' => 'nta', 'Nitab4.5_0001336g0020' => 'nta', 'Nitab4.5_0001796g0030' => 'nta', 'Nitab4.5_0003348g0060' => 'nta', 'Nitab4.5_0003698g0040' => 'nta', 'Nitab4.5_0003942g0090' => 'nta', 'Nitab4.5_0004775g0070' => 'nta', 'Nitab4.5_0004864g0030' => 'nta', 'Nitab4.5_0005615g0020' => 'nta', 'Nitab4.5_0009288g0030' => 'nta', 'Nitab4.5_0009341g0010' => 'nta', 'Nitab4.5_0009535g0010' => 'nta', 'Nn1g03995' => 'nnu', 'Nn1g04100' => 'nnu', 'Nn1g06530' => 'nnu', 'Nn3g16404' => 'nnu', 'Nn3g17212' => 'nnu', 'Nn3g20776' => 'nnu', 'Nn3g21923' => 'nnu', 'Nn5g27737' => 'nnu', 'Nn5g29461' => 'nnu', 'Nn7g38355' => 'nnu', 'Nn8g39873' => 'nnu', 'Oeu000548.2' => 'oeu', 'Oeu004672.1' => 'oeu', 'Oeu015605.2' => 'oeu', 'Oeu016092.1' => 'oeu', 'Oeu017879.3' => 'oeu', 'Oeu024910.1' => 'oeu', 'Oeu028965.1' => 'oeu', 'Oeu031269.1' => 'oeu', 'Oeu031270.1' => 'oeu', 'Oeu032535.1' => 'oeu', 'Oeu034151.1' => 'oeu', 'Oeu034152.1' => 'oeu', 'Oeu034588.2' => 'oeu', 'Oeu050846.1' => 'oeu', 'Oeu050849.2' => 'oeu', 'Oeu051063.2' => 'oeu', 'Oeu052368.1' => 'oeu', 'Oeu052370.1' => 'oeu', 'Os01g0210400' => 'osa', 'Os01g0304300' => 'osa', 'Os01g0749100' => 'osa', 'Os02g0745800' => 'osa', 'Os03g0769050' => 'osa', 'Os05g0531500' => 'osa', 'Os06g0724300' => 'osa', 'Os11g0198100' => 'osa', 'Peaxi162Scf00069g01425' => 'pax', 'Peaxi162Scf00280g00811' => 'pax', 'Peaxi162Scf00310g00615' => 'pax', 'Peaxi162Scf00362g00542' => 'pax', 'Peaxi162Scf00461g00310' => 'pax', 'Peaxi162Scf00530g00118' => 'pax', 'Peaxi162Scf00541g00057' => 'pax', 'Peaxi162Scf00661g00017' => 'pax', 'Peaxi162Scf00926g00027' => 'pax', 'Peaxi162Scf01064g00263' => 'pax', 'Peaxi162Scf01211g00135' => 'pax', 'PGR004G2336' => 'pgr', 'PGR042G0327' => 'pgr', 'PGR042G1957' => 'pgr', 'PGR042G2003' => 'pgr', 'PGR042G3929' => 'pgr', 'PGR083G1137' => 'pgr', 'PGR083G1364' => 'pgr', 'PGSC0003DMG400003381' => 'stu', 'PGSC0003DMG400003417' => 'stu', 'PGSC0003DMG400008981' => 'stu', 'PGSC0003DMG400012417' => 'stu', 'PGSC0003DMG400012823' => 'stu', 'PGSC0003DMG400016885' => 'stu', 'PGSC0003DMG400022812' => 'stu', 'PGSC0003DMG400029726' => 'stu', 'PGSC0003DMG401009243' => 'stu', 'PGSC0003DMG401031505' => 'stu', 'PGSC0003DMG402031505' => 'stu', 'Phvul.001G017600' => 'pvu', 'Phvul.002G193500' => 'pvu', 'Phvul.002G228900' => 'pvu', 'Phvul.002G236800' => 'pvu', 'Phvul.003G049500' => 'pvu', 'Phvul.005G072000' => 'pvu', 'Phvul.006G164800' => 'pvu', 'Phvul.006G185100' => 'pvu', 'Phvul.007G090000' => 'pvu', 'Potri.001G399800' => 'ptr', 'Potri.002G149900' => 'ptr', 'Potri.004G044100' => 'ptr', 'Potri.004G177600' => 'ptr', 'Potri.009G138000' => 'ptr', 'Potri.010G094000' => 'ptr', 'Potri.011G053000' => 'ptr', 'Potri.011G119300' => 'ptr', 'Potri.013G113700' => 'ptr', 'Potri.018G107800' => 'ptr', 'Potri.019G084100' => 'ptr', 'Pp3c14_23720' => 'ppa', 'Pp3c16_6340' => 'ppa', 'Pp3c23_13420' => 'ppa', 'Pp3c24_2740' => 'ppa', 'Pp3c25_860' => 'ppa', 'Pp3c8_21750' => 'ppa', 'Prupe.1G273000' => 'ppe', 'Prupe.1G273700' => 'ppe', 'Prupe.1G274100' => 'ppe', 'Prupe.2G023300' => 'ppe', 'Prupe.4G048000' => 'ppe', 'Prupe.4G080400' => 'ppe', 'Prupe.4G181200' => 'ppe', 'Prupe.8G056900' => 'ppe', 'Prupe.8G168700' => 'ppe', 'Psat1g189080' => 'psa', 'Psat1g204760' => 'psa', 'Psat4g175560' => 'psa', 'Psat4g177720' => 'psa', 'Psat5g244240' => 'psa', 'Psat6g010720' => 'psa', 'Psat6g187200' => 'psa', 'Psat7g072040' => 'psa', 'PSO017G3501' => 'pso', 'PSO063G2148' => 'pso', 'PSO063G5608' => 'pso', 'PSO210G6392' => 'pso', 'PSO541G2319' => 'pso', 'PSO541G2836' => 'pso', 'PSO541G4012' => 'pso', 'PSO541G6253' => 'pso', 'PSO675G0580' => 'pso', 'PSO675G0856' => 'pso', 'PSO675G5635' => 'pso', 'PSO675G9157' => 'pso', 'PSO832G1660' => 'pso', 'PSO832G1969' => 'pso', 'QL02p007186' => 'qlo', 'QL02p033904' => 'qlo', 'QL03p064391' => 'qlo', 'QL05p040593' => 'qlo', 'QL05p058242' => 'qlo', 'QL08p021825' => 'qlo', 'QL11p004981' => 'qlo', 'RcHm_v2.0_Chr1g0318301' => 'rch', 'RcHm_v2.0_Chr4g0418501' => 'rch', 'RcHm_v2.0_Chr4g0439971' => 'rch', 'RcHm_v2.0_Chr5g0008541' => 'rch', 'RcHm_v2.0_Chr5g0014101' => 'rch', 'RcHm_v2.0_Chr5g0014131' => 'rch', 'RcHm_v2.0_Chr5g0033621' => 'rch', 'RcHm_v2.0_Chr6g0272041' => 'rch', 'RcHm_v2.0_Chr6g0278831' => 'rch', 'Rhsim02G0130400' => 'rsi', 'Rhsim02G0171100' => 'rsi', 'Rhsim05G0053000' => 'rsi', 'Rhsim05G0053100' => 'rsi', 'Rhsim06G0096500' => 'rsi', 'Rhsim06G0096600' => 'rsi', 'Rhsim06G0199100' => 'rsi', 'Rhsim12G0062300' => 'rsi', 'Rhsim12G0062800' => 'rsi', 'Sabra02G0118600' => 'sbr', 'Sabra04G0027300' => 'sbr', 'Sabra04G0119500' => 'sbr', 'Sabra08G0112500' => 'sbr', 'Sabra11G0036800' => 'sbr', 'Sabra11G0103800' => 'sbr', 'Sabra13G0096300' => 'sbr', 'Sabra16G0262300' => 'sbr', 'Sabra18G0091700' => 'sbr', 'Sabra19G0095400' => 'sbr', 'SalBow6G3080' => 'sbo', 'SalBow7G1157' => 'sbo', 'SalBow7G2123' => 'sbo', 'SalBow7G2285' => 'sbo', 'SalBow7G3537' => 'sbo', 'SalBow8G2947' => 'sbo', 'SalBow8G4463' => 'sbo', 'SalBow8G5466' => 'sbo', 'Sc01g0001750' => 'sci', 'Sc02g0006640' => 'sci', 'Sc02g0006670' => 'sci', 'Sc04g0008220' => 'sci', 'Sc05g0006190' => 'sci', 'Sc08g0002760' => 'sci', 'Sc17g0006170' => 'sci', 'Sc22g0002050' => 'sci', 'Sc23g0001190' => 'sci', 'Sc24g0000980' => 'sci', 'Sed0006245' => 'sed', 'Sed0007543' => 'sed', 'Sed0009411' => 'sed', 'Sed0010765' => 'sed', 'Sed0012944' => 'sed', 'Sed0014682' => 'sed', 'Sed0016174' => 'sed', 'Sed0016796' => 'sed', 'Sed0020317' => 'sed', 'Sed0021467' => 'sed', 'SEGI_01316' => 'sgi', 'SEGI_03374' => 'sgi', 'SEGI_16265' => 'sgi', 'SEGI_18569' => 'sgi', 'SEGI_20351' => 'sgi', 'SEGI_26395' => 'sgi', 'SEGI_29469' => 'sgi', 'SEGI_34771' => 'sgi', 'SEGI_36769' => 'sgi', 'SEGI_37139' => 'sgi', 'SGA_v2.0_scaffold100G29687' => 'sas', 'SGA_v2.0_scaffold118G32472' => 'sas', 'SGA_v2.0_scaffold14G07051' => 'sas', 'SGA_v2.0_scaffold183G39845' => 'sas', 'SGA_v2.0_scaffold1G00174' => 'sas', 'SGA_v2.0_scaffold22G09714' => 'sas', 'SGA_v2.0_scaffold333G48992' => 'sas', 'SGA_v2.0_scaffold46G17491' => 'sas', 'SGA_v2.0_scaffold49G18294' => 'sas', 'SGA_v2.0_scaffold63G21658' => 'sas', 'SHI01741' => 'shi', 'SHI05771' => 'shi', 'SHI18077' => 'shi', 'SHI20525' => 'shi', 'SHI20527' => 'shi', 'SHI20528' => 'shi', 'SMO172G0185' => 'smo', 'SMO198G0020' => 'smo', 'SMO351G0006' => 'smo', 'SMO356G0118' => 'smo', 'SMO358G0296' => 'smo', 'SMO367G0079' => 'smo', 'SMO367G1277' => 'smo', 'Solyc01g014220.3' => 'sly', 'Solyc01g111770.2' => 'sly', 'Solyc02g078180.3' => 'sly', 'Solyc03g006430.3' => 'sly', 'Solyc03g006456.1' => 'sly', 'Solyc03g079860.2' => 'sly', 'Solyc04g079770.3' => 'sly', 'Solyc05g007430.4' => 'sly', 'Solyc07g063150.3' => 'sly', 'Solyc08g016620.3' => 'sly', 'Solyc09g057590.3' => 'sly', 'Solyc09g057600.1' => 'sly', 'Solyc10g009050.3' => 'sly', 'Solyc11g017420.2' => 'sly', 'Sopen01g053810' => 'spe', 'Sopen02g023040' => 'spe', 'Sopen03g002440' => 'spe', 'Sopen04g033350' => 'spe', 'Sopen05g003310' => 'spe', 'Sopen07g004050' => 'spe', 'Sopen07g031340' => 'spe', 'Sopen08g006990' => 'spe', 'Sopen10g004830' => 'spe', 'Sopen11g009370' => 'spe', 'Sp1g24450' => 'spa', 'Sp1g29670' => 'spa', 'Sp1g39600' => 'spa', 'Sp2g11080' => 'spa', 'Sp2g13970' => 'spa', 'Sp4g16130' => 'spa', 'Sp6g13080' => 'spa', 'Sp7g37270' => 'spa', 'TAR371G0065' => 'tar', 'TAR376G0340' => 'tar', 'TAR376G0435' => 'tar', 'TAR381G0002' => 'tar', 'TAR381G1236' => 'tar', 'TAR624G0055' => 'tar', 'TAR624G0324' => 'tar', 'TAR624G0696' => 'tar', 'TAR624G0906' => 'tar', 'TAR625G0107' => 'tar', 'TAR626G0015' => 'tar', 'TAR626G1356' => 'tar', 'TAR627G0888' => 'tar', 'TAR628G0399' => 'tar', 'TAR628G1327' => 'tar', 'TAR629G2831' => 'tar', 'TAR629G2874' => 'tar', 'TAR633G1432' => 'tar', 'TAR633G2771' => 'tar', 'THA.LOC104803394' => 'tha', 'THA.LOC104805153' => 'tha', 'THA.LOC104806784' => 'tha', 'THA.LOC104810473' => 'tha', 'THA.LOC104813100' => 'tha', 'THA.LOC104814215' => 'tha', 'THA.LOC104815554' => 'tha', 'THA.LOC104820544' => 'tha', 'THA.LOC104824754' => 'tha', 'THA.LOC104827717' => 'tha', 'Thecc.02G031400' => 'tca', 'Thecc.02G055900' => 'tca', 'Thecc.02G350800' => 'tca', 'Thecc.06G150900' => 'tca', 'Thecc.06G186600' => 'tca', 'Thecc.07G089600' => 'tca', 'Thecc.08G020400' => 'tca', 'Thecc.08G182100' => 'tca', 'Thhalv10000873m.g' => 'esa', 'Thhalv10004185m.g' => 'esa', 'Thhalv10006981m.g' => 'esa', 'Thhalv10007204m.g' => 'esa', 'Thhalv10011374m.g' => 'esa', 'Thhalv10013482m.g' => 'esa', 'Thhalv10017801m.g' => 'esa', 'Thhalv10024983m.g' => 'esa', 'TPR.G12072' => 'tpr', 'TPR.G15769' => 'tpr', 'TPR.G16504' => 'tpr', 'TPR.G16506' => 'tpr', 'TPR.G24345' => 'tpr', 'TPR.G26666' => 'tpr', 'TPR.G27320' => 'tpr', 'TPR.G31819' => 'tpr', 'TPR.G38879' => 'tpr', 'TPR.G39015' => 'tpr', 'TPR.G8819' => 'tpr', 'TWI09G0924' => 'twi', 'TWI12G0811' => 'twi', 'TWI12G1294' => 'twi', 'TWI31G0150' => 'twi', 'TWI36G1262' => 'twi', 'TWI38G1287' => 'twi', 'TWI38G1633' => 'twi', 'TWI38G1982' => 'twi', 'TWI39G0116' => 'twi', 'TWI60G1011' => 'twi', 'TWI63G0171' => 'twi', 'TWI73G0839' => 'twi', 'TWI79G1511' => 'twi', 'unitig_0.g915' => 'ugi', 'unitig_0.g916' => 'ugi', 'unitig_21.g20219' => 'ugi', 'unitig_21.g20416' => 'ugi', 'unitig_578.g16132' => 'ugi', 'unitig_578.g16718' => 'ugi', 'unitig_62.g23481' => 'ugi', 'unitig_744.g24535' => 'ugi', 'unitig_749.g13525' => 'ugi', 'vmacro01248' => 'vma', 'vmacro02290' => 'vma', 'vmacro10946' => 'vma', 'vmacro11865' => 'vma', 'vmacro12493' => 'vma', 'vmacro17322' => 'vma', 'vmacro21599' => 'vma', 'vmacro23041' => 'vma', 'VMungo0251G0004' => 'vmu', 'VMungo0251G2639' => 'vmu', 'VMungo0251G2967' => 'vmu', 'VMungo0540G0864' => 'vmu', 'VMungo0540G1569' => 'vmu', 'VMungo0647G0317' => 'vmu', 'VMungo0720G1373' => 'vmu', 'VMungo0720G1508' => 'vmu', 'VMungo1080G0485' => 'vmu', 'VMungo1215G3177' => 'vmu', 'Zm00001eb112600' => 'zma', 'Zm00001eb120220' => 'zma', 'Zm00001eb153240' => 'zma', 'Zm00001eb168880' => 'zma', 'Zm00001eb213920' => 'zma', 'Zm00001eb228280' => 'zma', 'Zm00001eb254580' => 'zma', 'Zm00001eb272180' => 'zma', 'Zm00001eb293190' => 'zma', 'Zm00001eb322930' => 'zma', 'Zm00001eb353360' => 'zma', 'Zm00001eb353390' => 'zma', 'Zm00001eb353430' => 'zma', 'Zm00001eb353440' => 'zma', 'Zm00001eb353780' => 'zma' ) $gf_id = 'HOM05D000499' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000499' ) $data_identifier = 'HOM05D000499' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 29, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 12, 'amhyb' => (int) 8, 'aly' => (int) 12, 'aox' => (int) 9, 'arhy' => (int) 26, 'ath' => (int) 8, 'atr' => (int) 7, 'acertr' => (int) 10, 'cqu' => (int) 15, 'bca' => (int) 29, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 11, 'cansat' => (int) 8, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 9, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 8, 'cpa' => (int) 10, 'csa' => (int) 7, 'camsi' => (int) 20, 'dca' => (int) 8, 'din' => (int) 12, 'dzi' => (int) 14, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 6, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 38, 'gra' => (int) 16, 'vvi' => (int) 8, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 5, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 11, 'lja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 11, 'mpo' => (int) 3, 'mbi' => (int) 14, 'mdo' => (int) 14, 'mtr' => (int) 8, 'cme' => (int) 9, 'egut' => (int) 9, 'ama' => (int) 11, 'nta' => (int) 17, 'nnu' => (int) 11, 'oeu' => (int) 18, 'osa' => (int) 8, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 6, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 9, 'rsi' => (int) 9, 'sbr' => (int) 10, 'sbo' => (int) 8, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 10, 'sas' => (int) 10, 'shi' => (int) 6, 'smo' => (int) 7, 'sly' => (int) 14, 'spe' => (int) 10, 'spa' => (int) 8, 'tar' => (int) 19, 'tha' => (int) 10, 'tca' => (int) 8, 'esa' => (int) 8, 'tpr' => (int) 11, 'twi' => (int) 13, 'ugi' => (int) 9, 'vma' => (int) 8, 'vmu' => (int) 10, 'zma' => (int) 15 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb353780' $species_info = array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ) $local_species = 'sed' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000499', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1066', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p29780' => 'bna', 'A02p33180' => 'bna', 'A03p16470' => 'bna', 'A03p66010' => 'bna', 'A04p25970' => 'bna', 'A06p01270' => 'bna', 'A06p46080' => 'bna', 'A07p11400' => 'bna', 'A08p01840' => 'bna', 'A08p08230' => 'bna', 'A08p25740' => 'bna', 'A09p32070' => 'bna', 'A09p37830' => 'bna', 'A09p42840' => 'bna', 'A09p42850' => 'bna', 'Aa31LG10G2060' => 'aar', 'Aa31LG2G7410' => 'aar', 'Aa31LG6G10200' => 'aar', 'Aa31LG6G16680' => 'aar', 'Aa31LG6G8470' => 'aar', 'Aa31LG9G12730' => 'aar', 'Aa31LG9G13680' => 'aar', 'Aa31LG9G14920' => 'aar', 'Aa31LG9G6650' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4977' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5467' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3254' => 'aag', 'Actinidia02578' => 'ach', 'Actinidia07693' => 'ach', 'Actinidia08413' => 'ach', 'Actinidia08414' => 'ach', 'Actinidia15289' => 'ach', 'Actinidia19871' => 'ach', 'Actinidia21475' => 'ach', 'Actinidia22576' => 'ach', 'Actinidia28327' => 'ach', 'Actinidia32491' => 'ach', 'Actinidia39463' => 'ach', 'Actinidia39571' => 'ach', 'Ah.01g013750' => 'amhyb', 'Ah.01g023210' => 'amhyb', 'Ah.04g164850' => 'amhyb', 'Ah.05g178060' => 'amhyb', 'Ah.07g204270' => 'amhyb', 'Ah.07g208480' => 'amhyb', 'Ah.09g237410' => 'amhyb', 'Ah.14g089460' => 'amhyb', 'AL1G41790' => 'aly', 'AL1G49050' => 'aly', 'AL1G53810' => 'aly', 'AL1G61400' => 'aly', 'AL4G18580' => 'aly', 'AL5G12510' => 'aly', 'AL5G12540' => 'aly', 'AL6G43230' => 'aly', 'AL7G10370' => 'aly', 'AL7G19250' => 'aly', 'AL8G12240' => 'aly', 'AL8G18540' => 'aly', 'Aqoxy1G02409' => 'aox', 'Aqoxy2G03993' => 'aox', 'Aqoxy3G03357' => 'aox', 'Aqoxy4G00785' => 'aox', 'Aqoxy5G02598' => 'aox', 'Aqoxy6G00132' => 'aox', 'Aqoxy7G01776' => 'aox', 'Aqoxy7G02316' => 'aox', 'Aqoxy7G03973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.12AFKW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B8730' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27IQR1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3F75VG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3RE0GA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41TCQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.527VTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FIR39' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5W8UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DA38EV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ63HS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H1I32C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HC27T5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4M8AP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7N3CZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9UVDZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LS1NQA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT1D4B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SKC4TM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCFV76' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF9Q1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQWD9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1ZM88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WE07RT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YCK7VH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJE6Q6' => 'arhy', 'AT1G28240' => 'ath', 'AT1G34550' => 'ath', 'AT1G53040' => 'ath', 'AT2G02910' => 'ath', 'AT4G09630' => 'ath', 'AT4G38500' => 'ath', 'AT5G42660' => 'ath', 'AT5G46220' => 'ath', 'ATR0152G026' => 'atr', 'ATR0564G343' => 'atr', 'ATR0706G151' => 'atr', 'ATR0733G207' => 'atr', 'ATR0751G234' => 'atr', 'ATR0807G048' => 'atr', 'ATR1091G084' => 'atr', 'Atru.chr10.1229' => 'acertr', 'Atru.chr10.1230' => 'acertr', 'Atru.chr10.1874' => 'acertr', 'Atru.chr11.1808' => 'acertr', 'Atru.chr13.1795' => 'acertr', 'Atru.chr13.570' => 'acertr', 'Atru.chr2.2608' => 'acertr', 'Atru.chr2.2609' => 'acertr', 'Atru.chr5.3428' => 'acertr', 'Atru.chr8.1171' => 'acertr', 'AUR62004651' => 'cqu', 'AUR62008675' => 'cqu', 'AUR62010014' => 'cqu', 'AUR62013004' => 'cqu', 'AUR62014825' => 'cqu', 'AUR62015015' => 'cqu', 'AUR62015151' => 'cqu', 'AUR62017020' => 'cqu', 'AUR62019422' => 'cqu', 'AUR62023570' => 'cqu', 'AUR62025571' => 'cqu', 'AUR62029098' => 'cqu', 'AUR62033863' => 'cqu', 'AUR62034296' => 'cqu', 'AUR62040075' => 'cqu', 'BcaB02g07334' => 'bca', 'BcaB02g10575' => 'bca', 'BcaB03g12119' => 'bca', 'BcaB03g12120' => 'bca', 'BcaB03g13945' => 'bca', 'BcaB04g17123' => 'bca', 'BcaB04g17867' => 'bca', 'BcaB04g19839' => 'bca', 'BcaB07g30317' => 'bca', 'BcaB07g32432' => 'bca', 'BcaB07g33362' => 'bca', 'BcaB08g36611' => 'bca', 'BcaC01g00028' => 'bca', 'BcaC01g01356' => 'bca', 'BcaC01g02034' => 'bca', 'BcaC01g06051' => 'bca', 'BcaC03g16839' => 'bca', 'BcaC03g17176' => 'bca', 'BcaC05g26829' => 'bca', 'BcaC06g31490' => 'bca', 'BcaC06g35344' => 'bca', 'BcaC06g36570' => 'bca', 'BcaC07g37537' => 'bca', 'BcaC08g43491' => 'bca', 'BcaC08g43773' => 'bca', 'BcaNung00234' => 'bca', 'BcaNung01982' => 'bca', 'BcaNung03707' => 'bca', 'BcaNung06454' => 'bca', 'BolC2t10762H' => 'bol', 'BolC2t11191H' => 'bol', 'BolC3t14322H' => 'bol', 'BolC3t19747H' => 'bol', 'BolC3t21425H' => 'bol', 'BolC4t27800H' => 'bol', 'BolC5t31423H' => 'bol', 'BolC6t35951H' => 'bol', 'BolC6t36282H' => 'bol', 'BolC7t40678H' => 'bol', 'BolC7t40679H' => 'bol', 'BolC7t42222H' => 'bol', 'BolC7t43492H' => 'bol', 'BolC7t46785H' => 'bol', 'BolC8t47853H' => 'bol', 'BolC9t56805H' => 'bol', 'BraA02t08000Z' => 'bra', 'BraA02t08341Z' => 'bra', 'BraA03t10936Z' => 'bra', 'BraA03t15657Z' => 'bra', 'BraA04t18100Z' => 'bra', 'BraA05t20523Z' => 'bra', 'BraA06t23353Z' => 'bra', 'BraA06t27473Z' => 'bra', 'BraA06t27769Z' => 'bra', 'BraA07t28928Z' => 'bra', 'BraA08t32236Z' => 'bra', 'BraA08t32841Z' => 'bra', 'BraA08t34524Z' => 'bra', 'BraA09t38742Z' => 'bra', 'BraA09t39295Z' => 'bra', 'C02p47180' => 'bna', 'C02p50990' => 'bna', 'C03p19360' => 'bna', 'C03p74950' => 'bna', 'C03p91000' => 'bna', 'C04p63260' => 'bna', 'C05p27050' => 'bna', 'C06p08750' => 'bna', 'C06p11490' => 'bna', 'C07p02820' => 'bna', 'C07p17180' => 'bna', 'C07p29440' => 'bna', 'C07p63730' => 'bna', 'C09p39260' => 'bna', 'CAN.G1164.34' => 'can', 'CAN.G1164.39' => 'can', 'CAN.G1530.3' => 'can', 'CAN.G162.61' => 'can', 'CAN.G176.6' => 'can', 'CAN.G289.49' => 'can', 'CAN.G370.21' => 'can', 'CAN.G370.22' => 'can', 'CAN.G371.117' => 'can', 'CAN.G58.37' => 'can', 'CAN.G588.98' => 'can', 'CANSAT21G2266' => 'cansat', 'CANSAT25G2799' => 'cansat', 'CANSAT35G0862' => 'cansat', 'CANSAT35G1704' => 'cansat', 'CANSAT35G1760' => 'cansat', 'CANSAT56G3971' => 'cansat', 'CANSAT56G4116' => 'cansat', 'CANSAT80G1259' => 'cansat', 'CARHR027730' => 'chi', 'CARHR033880' => 'chi', 'CARHR043270' => 'chi', 'CARHR145330' => 'chi', 'CARHR145340' => 'chi', 'CARHR175570' => 'chi', 'CARHR181570' => 'chi', 'CARHR258470' => 'chi', 'CARHR260490' => 'chi', 'CARHR294220' => 'chi', 'Carub.0001s2668' => 'cru', 'Carub.0001s3257' => 'cru', 'Carub.0001s4220' => 'cru', 'Carub.0005s0179' => 'cru', 'Carub.0006s2807' => 'cru', 'Carub.0007s0039' => 'cru', 'Carub.0008s0169' => 'cru', 'Carub.0008s0636' => 'cru', 'Ca_00338_v3' => 'car', 'Ca_00542_v3' => 'car', 'Ca_01844_v3' => 'car', 'Ca_10611_v3' => 'car', 'Ca_13326_v3' => 'car', 'Ca_17944_v3' => 'car', 'Ca_18546_v3' => 'car', 'Ca_24219_v3' => 'car', 'Ca_29972_v3' => 'car', 'CBR_g3681' => 'cbr', 'CBR_g40021' => 'cbr', 'Cc01_g08140' => 'ccan', 'Cc02_g13410' => 'ccan', 'Cc02_g37480' => 'ccan', 'Cc05_g12030' => 'ccan', 'Cc09_g03370' => 'ccan', 'Cc09_g10300' => 'ccan', 'Cc10_g03530' => 'ccan', 'Cc10_g11380' => 'ccan', 'CDE01G0176' => 'cde', 'CDE02G0675' => 'cde', 'CDE02G0942' => 'cde', 'CDE02G1153' => 'cde', 'CDE02G4177' => 'cde', 'CDE04G2117' => 'cde', 'CDE04G2736' => 'cde', 'CDE08G1161' => 'cde', 'CDE09G1238' => 'cde', 'Cfa000467' => 'cfa', 'Cfa000947' => 'cfa', 'Cfa004969' => 'cfa', 'Cfa005284' => 'cfa', 'Cfa008993' => 'cfa', 'Cfa018187' => 'cfa', 'Cfa018454' => 'cfa', 'Cfa020585' => 'cfa', 'Ciclev10000424m.g' => 'ccl', 'Ciclev10003605m.g' => 'ccl', 'Ciclev10007828m.g' => 'ccl', 'Ciclev10014620m.g' => 'ccl', 'Ciclev10015169m.g' => 'ccl', 'Ciclev10018291m.g' => 'ccl', 'Ciclev10028256m.g' => 'ccl', 'Ciclev10033822m.g' => 'ccl', 'CiPaw.05G060300' => 'cil', 'CiPaw.05G085000' => 'cil', 'CiPaw.06G083700' => 'cil', 'CiPaw.06G120300' => 'cil', 'CiPaw.09G060500' => 'cil', 'CiPaw.09G123800' => 'cil', 'CiPaw.11G169700' => 'cil', 'CiPaw.12G118300' => 'cil', 'CiPaw.15G071000' => 'cil', 'CiPaw.15G081900' => 'cil', 'ClCG01G024610' => 'cla', 'ClCG03G006070' => 'cla', 'ClCG05G019250' => 'cla', 'ClCG09G009500' => 'cla', 'ClCG11G008200' => 'cla', 'ClCG11G018080' => 'cla', 'COL.COLO4_17373' => 'col', 'COL.COLO4_22994' => 'col', 'COL.COLO4_26389' => 'col', 'COL.COLO4_27170' => 'col', 'COL.COLO4_31074' => 'col', 'COL.COLO4_31465' => 'col', 'COL.COLO4_36438' => 'col', 'COL.COLO4_36439' => 'col', 'Cpa.g.c38781' => 'cpa', 'Cpa.g.sc128.12' => 'cpa', 'Cpa.g.sc166.7' => 'cpa', 'Cpa.g.sc166.8' => 'cpa', 'Cpa.g.sc20.111' => 'cpa', 'Cpa.g.sc27.31' => 'cpa', 'Cpa.g.sc64.36' => 'cpa', 'Cpa.g.sc64.37' => 'cpa', 'Cpa.g.sc66.49' => 'cpa', 'Cpa.g.sc80.64' => 'cpa', 'CsaV3_1G012320' => 'csa', 'CsaV3_2G008480' => 'csa', 'CsaV3_2G033450' => 'csa', 'CsaV3_3G044830' => 'csa', 'CsaV3_4G033710' => 'csa', 'CsaV3_6G051730' => 'csa', 'CsaV3_7G025350' => 'csa', 'CSS0001067' => 'camsi', 'CSS0005996' => 'camsi', 'CSS0006590' => 'camsi', 'CSS0009673' => 'camsi', 'CSS0010201' => 'camsi', 'CSS0010549' => 'camsi', 'CSS0011364' => 'camsi', 'CSS0014473' => 'camsi', 'CSS0014961' => 'camsi', 'CSS0020191' => 'camsi', 'CSS0021165' => 'camsi', 'CSS0022306' => 'camsi', 'CSS0030591' => 'camsi', 'CSS0030696' => 'camsi', 'CSS0032653' => 'camsi', 'CSS0037487' => 'camsi', 'CSS0041102' => 'camsi', 'CSS0041261' => 'camsi', 'CSS0046246' => 'camsi', 'CSS0049256' => 'camsi', 'DCAR_004075' => 'dca', 'DCAR_011538' => 'dca', 'DCAR_019553' => 'dca', 'DCAR_020952' => 'dca', 'DCAR_021739' => 'dca', 'DCAR_027407' => 'dca', 'DCAR_027913' => 'dca', 'DCAR_028066' => 'dca', 'Dinv05899' => 'din', 'Dinv07563' => 'din', 'Dinv08010' => 'din', 'Dinv14125' => 'din', 'Dinv20172' => 'din', 'Dinv30743' => 'din', 'Dinv31229' => 'din', 'Dinv34162' => 'din', 'Dinv36028' => 'din', 'Dinv39368' => 'din', 'Dinv40565' => 'din', 'Dinv41706' => 'din', 'Duzib052G0089' => 'dzi', 'Duzib116G0641' => 'dzi', 'Duzib132G0069' => 'dzi', 'Duzib132G1219' => 'dzi', 'Duzib147G0278' => 'dzi', 'Duzib160G0480' => 'dzi', 'Duzib170G0661' => 'dzi', 'Duzib177G0591' => 'dzi', 'Duzib187G1353' => 'dzi', 'Duzib192G0858' => 'dzi', 'Duzib192G0883' => 'dzi', 'Duzib213G0506' => 'dzi', 'Duzib235G0289' => 'dzi', 'Duzib251G0422' => 'dzi', 'ECA232G3898' => 'eca', 'ECA233G5950' => 'eca', 'ECA234G1699' => 'eca', 'ECA234G2421' => 'eca', 'ECA236G0426' => 'eca', 'ECA236G4331' => 'eca', 'ECA248G2573' => 'eca', 'EL10Ac1g00077' => 'bvu', 'EL10Ac1g01746' => 'bvu', 'EL10Ac2g03464' => 'bvu', 'EL10Ac4g08176' => 'bvu', 'EL10Ac7g17521' => 'bvu', 'EL10Ac8g20386' => 'bvu', 'EL10Ac9g21343' => 'bvu', 'EL10Ac9g22688' => 'bvu', 'Eucgr.B03434' => 'egr', 'Eucgr.D00618' => 'egr', 'Eucgr.E02395' => 'egr', 'Eucgr.F01129' => 'egr', 'Eucgr.F02622' => 'egr', 'Eucgr.F04207' => 'egr', 'FAN01G0570' => 'fan', 'FAN03G3351' => 'fan', 'FAN06G3702' => 'fan', 'FAN07G2149' => 'fan', 'FAN10G3758' => 'fan', 'FAN11G1170' => 'fan', 'FAN11G2050' => 'fan', 'FAN11G2724' => 'fan', 'FAN12G1700' => 'fan', 'FAN12G2028' => 'fan', 'FAN15G1160' => 'fan', 'FAN15G3063' => 'fan', 'FAN16G2540' => 'fan', 'FAN16G3077' => 'fan', 'FAN16G3624' => 'fan', 'FAN17G0221' => 'fan', 'FAN20G2492' => 'fan', 'FAN20G2905' => 'fan', 'FAN21G0548' => 'fan', 'FAN21G1300' => 'fan', 'FAN22G0077' => 'fan', 'FAN22G1315' => 'fan', 'FAN24G1280' => 'fan', 'FAN24G1445' => 'fan', 'FAN24G3527' => 'fan', 'FAN25G0464' => 'fan', 'FAN25G2885' => 'fan', 'FAN25G3270' => 'fan', 'FAN27G1101' => 'fan', 'FAN27G2846' => 'fan', 'FAN27G3524' => 'fan', 'FvH4_2g11770' => 'fve', 'FvH4_2g15630' => 'fve', 'FvH4_3g05570' => 'fve', 'FvH4_3g09110' => 'fve', 'FvH4_3g19940' => 'fve', 'FvH4_4g04821' => 'fve', 'FvH4_4g31480' => 'fve', 'FvH4_7g01740' => 'fve', 'Glyma.05G130400' => 'gma', 'Glyma.05G156400' => 'gma', 'Glyma.07G197000' => 'gma', 'Glyma.08G085151' => 'gma', 'Glyma.08G114500' => 'gma', 'Glyma.08G300400' => 'gma', 'Glyma.10G215800' => 'gma', 'Glyma.12G224400' => 'gma', 'Glyma.13G179300' => 'gma', 'Glyma.13G218151' => 'gma', 'Glyma.13G238800' => 'gma', 'Glyma.13G276900' => 'gma', 'Glyma.14G078200' => 'gma', 'Glyma.15G074500' => 'gma', 'Glyma.15G094100' => 'gma', 'Glyma.17G247200' => 'gma', 'Glyma.18G120100' => 'gma', 'Glyma.20G176000' => 'gma', 'Gohir.A01G063600' => 'ghi', 'Gohir.A01G170301' => 'ghi', 'Gohir.A02G060500' => 'ghi', 'Gohir.A05G133850' => 'ghi', 'Gohir.A05G161400' => 'ghi', 'Gohir.A06G012900' => 'ghi', 'Gohir.A06G035901' => 'ghi', 'Gohir.A06G127100' => 'ghi', 'Gohir.A06G210500' => 'ghi', 'Gohir.A08G008650' => 'ghi', 'Gohir.A09G072700' => 'ghi', 'Gohir.A09G088301' => 'ghi', 'Gohir.A10G040600' => 'ghi', 'Gohir.A12G036300' => 'ghi', 'Gohir.A12G143350' => 'ghi', 'Gohir.A12G165500' => 'ghi', 'Gohir.A13G145700' => 'ghi', 'Gohir.D01G050000' => 'ghi', 'Gohir.D01G051366' => 'ghi', 'Gohir.D01G161350' => 'ghi', 'Gohir.D02G065900' => 'ghi', 'Gohir.D05G164200' => 'ghi', 'Gohir.D05G355500' => 'ghi', 'Gohir.D06G010400' => 'ghi', 'Gohir.D06G111250' => 'ghi', 'Gohir.D06G132000' => 'ghi', 'Gohir.D06G210500' => 'ghi', 'Gohir.D07G165675' => 'ghi', 'Gohir.D08G062240' => 'ghi', 'Gohir.D08G086101' => 'ghi', 'Gohir.D08G138060' => 'ghi', 'Gohir.D09G072300' => 'ghi', 'Gohir.D10G041400' => 'ghi', 'Gohir.D11G191020' => 'ghi', 'Gohir.D11G212066' => 'ghi', 'Gohir.D12G036300' => 'ghi', 'Gohir.D12G168600' => 'ghi', 'Gohir.D13G150600' => 'ghi', 'Gorai.001G057300' => 'gra', 'Gorai.002G069900' => 'gra', 'Gorai.002G200000' => 'gra', 'Gorai.003G067600' => 'gra', 'Gorai.005G074800' => 'gra', 'Gorai.006G087300' => 'gra', 'Gorai.008G037500' => 'gra', 'Gorai.008G181400' => 'gra', 'Gorai.009G169400' => 'gra', 'Gorai.009G387900' => 'gra', 'Gorai.010G013300' => 'gra', 'Gorai.010G153800' => 'gra', 'Gorai.010G255800' => 'gra', 'Gorai.011G043700' => 'gra', 'Gorai.011G198900' => 'gra', 'Gorai.013G168400' => 'gra', 'GSVIVG01005212001' => 'vvi', 'GSVIVG01006163001' => 'vvi', 'GSVIVG01009625001' => 'vvi', 'GSVIVG01014338001' => 'vvi', 'GSVIVG01020005001' => 'vvi', 'GSVIVG01021450001' => 'vvi', 'GSVIVG01023975001' => 'vvi', 'GSVIVG01034490001' => 'vvi', 'HanXRQChr04g0112071' => 'han', 'HanXRQChr05g0131151' => 'han', 'HanXRQChr09g0262371' => 'han', 'HanXRQChr09g0268401' => 'han', 'HanXRQChr10g0279241' => 'han', 'HanXRQChr10g0297961' => 'han', 'HanXRQChr11g0326231' => 'han', 'HanXRQChr11g0328471' => 'han', 'HanXRQChr16g0507941' => 'han', 'HanXRQChr17g0560211' => 'han', 'Haze_02108' => 'cav', 'Haze_02428' => 'cav', 'Haze_05593' => 'cav', 'Haze_06448' => 'cav', 'Haze_09427' => 'cav', 'Haze_12022' => 'cav', 'Haze_17612' => 'cav', 'Haze_17928' => 'cav', 'Hma1.2p1_0032F.1_g019250' => 'hma', 'Hma1.2p1_0163F.1_g072690' => 'hma', 'Hma1.2p1_0265F.1_g106710' => 'hma', 'Hma1.2p1_0286F.1_g113970' => 'hma', 'Hma1.2p1_0363F.1_g136640' => 'hma', 'Hma1.2p1_0584F.1_g183470' => 'hma', 'Hma1.2p1_0885F.1_g232570' => 'hma', 'HPP92_006022' => 'vpl', 'HPP92_007320' => 'vpl', 'HPP92_011521' => 'vpl', 'HPP92_019387' => 'vpl', 'HPP92_024038' => 'vpl', 'Hund05891' => 'sun', 'Hund06450' => 'sun', 'Hund12053' => 'sun', 'Hund16800' => 'sun', 'Hund21222' => 'sun', 'Hund22896' => 'sun', 'Hund23746' => 'sun', 'Hund27083' => 'sun', 'Lalb_Chr02g0141831' => 'lal', 'Lalb_Chr02g0141841' => 'lal', 'Lalb_Chr05g0220411' => 'lal', 'Lalb_Chr06g0162081' => 'lal', 'Lalb_Chr09g0327651' => 'lal', 'Lalb_Chr13g0295051' => 'lal', 'Lalb_Chr15g0086801' => 'lal', 'Lalb_Chr16g0383781' => 'lal', 'Lalb_Chr16g0383791' => 'lal', 'Lalb_Chr18g0055441' => 'lal', 'Lalb_Chr18g0059611' => 'lal', 'Lalb_Chr20g0109661' => 'lal', 'Lalb_Chr20g0109831' => 'lal', 'Lalb_Chr20g0121871' => 'lal', 'Lalb_Chr22g0355361' => 'lal', 'Lalb_Chr25g0286371' => 'lal', 'Lj1A1187G43' => 'lonja', 'Lj1A1205T50' => 'lonja', 'Lj1A800G33' => 'lonja', 'Lj1C1187T7' => 'lonja', 'Lj1C843T11' => 'lonja', 'Lj1g0010940' => 'lja', 'Lj2A288T69' => 'lonja', 'Lj3g0024276' => 'lja', 'Lj4A47T76' => 'lonja', 'Lj4g0005805' => 'lja', 'Lj4g0006097' => 'lja', 'Lj4g0008528' => 'lja', 'Lj4g0024907' => 'lja', 'Lj5g0012472' => 'lja', 'Lj5g0018648' => 'lja', 'Lj6C789G1' => 'lonja', 'Lj6g0004000' => 'lja', 'Lj7A292G67' => 'lonja', 'Lj7A292T64' => 'lonja', 'Lj9A400T58' => 'lonja', 'Lsat_1_v5_gn_1_126181' => 'lsa', 'Lsat_1_v5_gn_4_123041' => 'lsa', 'Lsat_1_v5_gn_4_133620' => 'lsa', 'Lsat_1_v5_gn_4_53221' => 'lsa', 'Lsat_1_v5_gn_4_71961' => 'lsa', 'Lsat_1_v5_gn_7_105241' => 'lsa', 'Lsat_1_v5_gn_7_21361' => 'lsa', 'Lsat_1_v5_gn_7_28860' => 'lsa', 'Lsat_1_v5_gn_7_31260' => 'lsa', 'Lsat_1_v5_gn_8_52801' => 'lsa', 'Manes.02G191400' => 'mes', 'Manes.03G110100' => 'mes', 'Manes.04G071100' => 'mes', 'Manes.05G100500' => 'mes', 'Manes.05G164700' => 'mes', 'Manes.15G087000' => 'mes', 'Manes.15G121500' => 'mes', 'Manes.16G028300' => 'mes', 'Manes.17G046100' => 'mes', 'Manes.17G069800' => 'mes', 'Manes.18G100500' => 'mes', 'Mapoly0002s0109' => 'mpo', 'Mapoly0024s0007' => 'mpo', 'Mapoly0089s0032' => 'mpo', 'MBI04_g42241_MAGBIO' => 'mbi', 'MBI05_g11988_MAGBIO' => 'mbi', 'MBI05_g35452_MAGBIO' => 'mbi', 'MBI07_g30179_MAGBIO' => 'mbi', 'MBI07_g35859_MAGBIO' => 'mbi', 'MBI07_g35860_MAGBIO' => 'mbi', 'MBI07_g37166_MAGBIO' => 'mbi', 'MBI08_g18172_MAGBIO' => 'mbi', 'MBI09_g08441_MAGBIO' => 'mbi', 'MBI13_g01676_MAGBIO' => 'mbi', 'MBI14_g42955_MAGBIO' => 'mbi', 'MBI16_g13161_MAGBIO' => 'mbi', 'MBI17_g27204_MAGBIO' => 'mbi', 'MBI19_g21595_MAGBIO' => 'mbi', 'MD00G1148400' => 'mdo', 'MD02G1301200' => 'mdo', 'MD03G1227800' => 'mdo', 'MD05G1041100' => 'mdo', 'MD05G1124800' => 'mdo', 'MD05G1284000' => 'mdo', 'MD05G1338800' => 'mdo', 'MD05G1338900' => 'mdo', 'MD07G1022800' => 'mdo', 'MD10G1047500' => 'mdo', 'MD10G1127500' => 'mdo', 'MD10G1262300' => 'mdo', 'MD10G1293800' => 'mdo', 'MD16G1074300' => 'mdo', 'Medtr1g021670' => 'mtr', 'Medtr1g096320' => 'mtr', 'Medtr2g013690' => 'mtr', 'Medtr2g019450' => 'mtr', 'Medtr2g085170' => 'mtr', 'Medtr4g088785' => 'mtr', 'Medtr8g055930' => 'mtr', 'Medtr8g085850' => 'mtr', 'MELO3C002605.2' => 'cme', 'MELO3C003891.2' => 'cme', 'MELO3C004012.2' => 'cme', 'MELO3C007134.2' => 'cme', 'MELO3C008118.2' => 'cme', 'MELO3C016700.2' => 'cme', 'MELO3C024127.2' => 'cme', 'MELO3C033361.2' => 'cme', 'MELO3C033362.2' => 'cme', 'Migut.C00430' => 'egut', 'Migut.C01246' => 'egut', 'Migut.E00101' => 'egut', 'Migut.H01486' => 'egut', 'Migut.H01939' => 'egut', 'Migut.K00360' => 'egut', 'Migut.M00910' => 'egut', 'Migut.M01139' => 'egut', 'Migut.N02677' => 'egut', 'MSTRG.13252' => 'ama', 'MSTRG.14701' => 'ama', 'MSTRG.1521' => 'ama', 'MSTRG.15884' => 'ama', 'MSTRG.16242' => 'ama', 'MSTRG.22285' => 'ama', 'MSTRG.22444' => 'ama', 'MSTRG.2349' => 'ama', 'MSTRG.26308' => 'ama', 'MSTRG.28296' => 'ama', 'MSTRG.9895' => 'ama', 'Nitab4.5_0000110g0060' => 'nta', 'Nitab4.5_0000420g0130' => 'nta', 'Nitab4.5_0000422g0030' => 'nta', 'Nitab4.5_0000560g0180' => 'nta', 'Nitab4.5_0000703g0100' => 'nta', 'Nitab4.5_0000786g0200' => 'nta', 'Nitab4.5_0001336g0020' => 'nta', 'Nitab4.5_0001796g0030' => 'nta', 'Nitab4.5_0003348g0060' => 'nta', 'Nitab4.5_0003698g0040' => 'nta', 'Nitab4.5_0003942g0090' => 'nta', 'Nitab4.5_0004775g0070' => 'nta', 'Nitab4.5_0004864g0030' => 'nta', 'Nitab4.5_0005615g0020' => 'nta', 'Nitab4.5_0009288g0030' => 'nta', 'Nitab4.5_0009341g0010' => 'nta', 'Nitab4.5_0009535g0010' => 'nta', 'Nn1g03995' => 'nnu', 'Nn1g04100' => 'nnu', 'Nn1g06530' => 'nnu', 'Nn3g16404' => 'nnu', 'Nn3g17212' => 'nnu', 'Nn3g20776' => 'nnu', 'Nn3g21923' => 'nnu', 'Nn5g27737' => 'nnu', 'Nn5g29461' => 'nnu', 'Nn7g38355' => 'nnu', 'Nn8g39873' => 'nnu', 'Oeu000548.2' => 'oeu', 'Oeu004672.1' => 'oeu', 'Oeu015605.2' => 'oeu', 'Oeu016092.1' => 'oeu', 'Oeu017879.3' => 'oeu', 'Oeu024910.1' => 'oeu', 'Oeu028965.1' => 'oeu', 'Oeu031269.1' => 'oeu', 'Oeu031270.1' => 'oeu', 'Oeu032535.1' => 'oeu', 'Oeu034151.1' => 'oeu', 'Oeu034152.1' => 'oeu', 'Oeu034588.2' => 'oeu', 'Oeu050846.1' => 'oeu', 'Oeu050849.2' => 'oeu', 'Oeu051063.2' => 'oeu', 'Oeu052368.1' => 'oeu', 'Oeu052370.1' => 'oeu', 'Os01g0210400' => 'osa', 'Os01g0304300' => 'osa', 'Os01g0749100' => 'osa', 'Os02g0745800' => 'osa', 'Os03g0769050' => 'osa', 'Os05g0531500' => 'osa', 'Os06g0724300' => 'osa', 'Os11g0198100' => 'osa', 'Peaxi162Scf00069g01425' => 'pax', 'Peaxi162Scf00280g00811' => 'pax', 'Peaxi162Scf00310g00615' => 'pax', 'Peaxi162Scf00362g00542' => 'pax', 'Peaxi162Scf00461g00310' => 'pax', 'Peaxi162Scf00530g00118' => 'pax', 'Peaxi162Scf00541g00057' => 'pax', 'Peaxi162Scf00661g00017' => 'pax', 'Peaxi162Scf00926g00027' => 'pax', 'Peaxi162Scf01064g00263' => 'pax', 'Peaxi162Scf01211g00135' => 'pax', 'PGR004G2336' => 'pgr', 'PGR042G0327' => 'pgr', 'PGR042G1957' => 'pgr', 'PGR042G2003' => 'pgr', 'PGR042G3929' => 'pgr', 'PGR083G1137' => 'pgr', 'PGR083G1364' => 'pgr', 'PGSC0003DMG400003381' => 'stu', 'PGSC0003DMG400003417' => 'stu', 'PGSC0003DMG400008981' => 'stu', 'PGSC0003DMG400012417' => 'stu', 'PGSC0003DMG400012823' => 'stu', 'PGSC0003DMG400016885' => 'stu', 'PGSC0003DMG400022812' => 'stu', 'PGSC0003DMG400029726' => 'stu', 'PGSC0003DMG401009243' => 'stu', 'PGSC0003DMG401031505' => 'stu', 'PGSC0003DMG402031505' => 'stu', 'Phvul.001G017600' => 'pvu', 'Phvul.002G193500' => 'pvu', 'Phvul.002G228900' => 'pvu', 'Phvul.002G236800' => 'pvu', 'Phvul.003G049500' => 'pvu', 'Phvul.005G072000' => 'pvu', 'Phvul.006G164800' => 'pvu', 'Phvul.006G185100' => 'pvu', 'Phvul.007G090000' => 'pvu', 'Potri.001G399800' => 'ptr', 'Potri.002G149900' => 'ptr', 'Potri.004G044100' => 'ptr', 'Potri.004G177600' => 'ptr', 'Potri.009G138000' => 'ptr', 'Potri.010G094000' => 'ptr', 'Potri.011G053000' => 'ptr', 'Potri.011G119300' => 'ptr', 'Potri.013G113700' => 'ptr', 'Potri.018G107800' => 'ptr', 'Potri.019G084100' => 'ptr', 'Pp3c14_23720' => 'ppa', 'Pp3c16_6340' => 'ppa', 'Pp3c23_13420' => 'ppa', 'Pp3c24_2740' => 'ppa', 'Pp3c25_860' => 'ppa', 'Pp3c8_21750' => 'ppa', 'Prupe.1G273000' => 'ppe', 'Prupe.1G273700' => 'ppe', 'Prupe.1G274100' => 'ppe', 'Prupe.2G023300' => 'ppe', 'Prupe.4G048000' => 'ppe', 'Prupe.4G080400' => 'ppe', 'Prupe.4G181200' => 'ppe', 'Prupe.8G056900' => 'ppe', 'Prupe.8G168700' => 'ppe', 'Psat1g189080' => 'psa', 'Psat1g204760' => 'psa', 'Psat4g175560' => 'psa', 'Psat4g177720' => 'psa', 'Psat5g244240' => 'psa', 'Psat6g010720' => 'psa', 'Psat6g187200' => 'psa', 'Psat7g072040' => 'psa', 'PSO017G3501' => 'pso', 'PSO063G2148' => 'pso', 'PSO063G5608' => 'pso', 'PSO210G6392' => 'pso', 'PSO541G2319' => 'pso', 'PSO541G2836' => 'pso', 'PSO541G4012' => 'pso', 'PSO541G6253' => 'pso', 'PSO675G0580' => 'pso', 'PSO675G0856' => 'pso', 'PSO675G5635' => 'pso', 'PSO675G9157' => 'pso', 'PSO832G1660' => 'pso', 'PSO832G1969' => 'pso', 'QL02p007186' => 'qlo', 'QL02p033904' => 'qlo', 'QL03p064391' => 'qlo', 'QL05p040593' => 'qlo', 'QL05p058242' => 'qlo', 'QL08p021825' => 'qlo', 'QL11p004981' => 'qlo', 'RcHm_v2.0_Chr1g0318301' => 'rch', 'RcHm_v2.0_Chr4g0418501' => 'rch', 'RcHm_v2.0_Chr4g0439971' => 'rch', 'RcHm_v2.0_Chr5g0008541' => 'rch', 'RcHm_v2.0_Chr5g0014101' => 'rch', 'RcHm_v2.0_Chr5g0014131' => 'rch', 'RcHm_v2.0_Chr5g0033621' => 'rch', 'RcHm_v2.0_Chr6g0272041' => 'rch', 'RcHm_v2.0_Chr6g0278831' => 'rch', 'Rhsim02G0130400' => 'rsi', 'Rhsim02G0171100' => 'rsi', 'Rhsim05G0053000' => 'rsi', 'Rhsim05G0053100' => 'rsi', 'Rhsim06G0096500' => 'rsi', 'Rhsim06G0096600' => 'rsi', 'Rhsim06G0199100' => 'rsi', 'Rhsim12G0062300' => 'rsi', 'Rhsim12G0062800' => 'rsi', 'Sabra02G0118600' => 'sbr', 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'Solyc03g079860.2' => 'sly', 'Solyc04g079770.3' => 'sly', 'Solyc05g007430.4' => 'sly', 'Solyc07g063150.3' => 'sly', 'Solyc08g016620.3' => 'sly', 'Solyc09g057590.3' => 'sly', 'Solyc09g057600.1' => 'sly', 'Solyc10g009050.3' => 'sly', 'Solyc11g017420.2' => 'sly', 'Sopen01g053810' => 'spe', 'Sopen02g023040' => 'spe', 'Sopen03g002440' => 'spe', 'Sopen04g033350' => 'spe', 'Sopen05g003310' => 'spe', 'Sopen07g004050' => 'spe', 'Sopen07g031340' => 'spe', 'Sopen08g006990' => 'spe', 'Sopen10g004830' => 'spe', 'Sopen11g009370' => 'spe', 'Sp1g24450' => 'spa', 'Sp1g29670' => 'spa', 'Sp1g39600' => 'spa', 'Sp2g11080' => 'spa', 'Sp2g13970' => 'spa', 'Sp4g16130' => 'spa', 'Sp6g13080' => 'spa', 'Sp7g37270' => 'spa', 'TAR371G0065' => 'tar', 'TAR376G0340' => 'tar', 'TAR376G0435' => 'tar', 'TAR381G0002' => 'tar', 'TAR381G1236' => 'tar', 'TAR624G0055' => 'tar', 'TAR624G0324' => 'tar', 'TAR624G0696' => 'tar', 'TAR624G0906' => 'tar', 'TAR625G0107' => 'tar', 'TAR626G0015' => 'tar', 'TAR626G1356' => 'tar', 'TAR627G0888' => 'tar', 'TAR628G0399' => 'tar', 'TAR628G1327' => 'tar', 'TAR629G2831' => 'tar', 'TAR629G2874' => 'tar', 'TAR633G1432' => 'tar', 'TAR633G2771' => 'tar', 'THA.LOC104803394' => 'tha', 'THA.LOC104805153' => 'tha', 'THA.LOC104806784' => 'tha', 'THA.LOC104810473' => 'tha', 'THA.LOC104813100' => 'tha', 'THA.LOC104814215' => 'tha', 'THA.LOC104815554' => 'tha', 'THA.LOC104820544' => 'tha', 'THA.LOC104824754' => 'tha', 'THA.LOC104827717' => 'tha', 'Thecc.02G031400' => 'tca', 'Thecc.02G055900' => 'tca', 'Thecc.02G350800' => 'tca', 'Thecc.06G150900' => 'tca', 'Thecc.06G186600' => 'tca', 'Thecc.07G089600' => 'tca', 'Thecc.08G020400' => 'tca', 'Thecc.08G182100' => 'tca', 'Thhalv10000873m.g' => 'esa', 'Thhalv10004185m.g' => 'esa', 'Thhalv10006981m.g' => 'esa', 'Thhalv10007204m.g' => 'esa', 'Thhalv10011374m.g' => 'esa', 'Thhalv10013482m.g' => 'esa', 'Thhalv10017801m.g' => 'esa', 'Thhalv10024983m.g' => 'esa', 'TPR.G12072' => 'tpr', 'TPR.G15769' => 'tpr', 'TPR.G16504' => 'tpr', 'TPR.G16506' => 'tpr', 'TPR.G24345' => 'tpr', 'TPR.G26666' => 'tpr', 'TPR.G27320' => 'tpr', 'TPR.G31819' => 'tpr', 'TPR.G38879' => 'tpr', 'TPR.G39015' => 'tpr', 'TPR.G8819' => 'tpr', 'TWI09G0924' => 'twi', 'TWI12G0811' => 'twi', 'TWI12G1294' => 'twi', 'TWI31G0150' => 'twi', 'TWI36G1262' => 'twi', 'TWI38G1287' => 'twi', 'TWI38G1633' => 'twi', 'TWI38G1982' => 'twi', 'TWI39G0116' => 'twi', 'TWI60G1011' => 'twi', 'TWI63G0171' => 'twi', 'TWI73G0839' => 'twi', 'TWI79G1511' => 'twi', 'unitig_0.g915' => 'ugi', 'unitig_0.g916' => 'ugi', 'unitig_21.g20219' => 'ugi', 'unitig_21.g20416' => 'ugi', 'unitig_578.g16132' => 'ugi', 'unitig_578.g16718' => 'ugi', 'unitig_62.g23481' => 'ugi', 'unitig_744.g24535' => 'ugi', 'unitig_749.g13525' => 'ugi', 'vmacro01248' => 'vma', 'vmacro02290' => 'vma', 'vmacro10946' => 'vma', 'vmacro11865' => 'vma', 'vmacro12493' => 'vma', 'vmacro17322' => 'vma', 'vmacro21599' => 'vma', 'vmacro23041' => 'vma', 'VMungo0251G0004' => 'vmu', 'VMungo0251G2639' => 'vmu', 'VMungo0251G2967' => 'vmu', 'VMungo0540G0864' => 'vmu', 'VMungo0540G1569' => 'vmu', 'VMungo0647G0317' => 'vmu', 'VMungo0720G1373' => 'vmu', 'VMungo0720G1508' => 'vmu', 'VMungo1080G0485' => 'vmu', 'VMungo1215G3177' => 'vmu', 'Zm00001eb112600' => 'zma', 'Zm00001eb120220' => 'zma', 'Zm00001eb153240' => 'zma', 'Zm00001eb168880' => 'zma', 'Zm00001eb213920' => 'zma', 'Zm00001eb228280' => 'zma', 'Zm00001eb254580' => 'zma', 'Zm00001eb272180' => 'zma', 'Zm00001eb293190' => 'zma', 'Zm00001eb322930' => 'zma', 'Zm00001eb353360' => 'zma', 'Zm00001eb353390' => 'zma', 'Zm00001eb353430' => 'zma', 'Zm00001eb353440' => 'zma', 'Zm00001eb353780' => 'zma' ), 'gf_id' => 'HOM05D000499', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000499' ), 'data_identifier' => 'HOM05D000499', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000499', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1066', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p29780' => 'bna', 'A02p33180' => 'bna', 'A03p16470' => 'bna', 'A03p66010' => 'bna', 'A04p25970' => 'bna', 'A06p01270' => 'bna', 'A06p46080' => 'bna', 'A07p11400' => 'bna', 'A08p01840' => 'bna', 'A08p08230' => 'bna', 'A08p25740' => 'bna', 'A09p32070' => 'bna', 'A09p37830' => 'bna', 'A09p42840' => 'bna', 'A09p42850' => 'bna', 'Aa31LG10G2060' => 'aar', 'Aa31LG2G7410' => 'aar', 'Aa31LG6G10200' => 'aar', 'Aa31LG6G16680' => 'aar', 'Aa31LG6G8470' => 'aar', 'Aa31LG9G12730' => 'aar', 'Aa31LG9G13680' => 'aar', 'Aa31LG9G14920' => 'aar', 'Aa31LG9G6650' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4977' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5467' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3254' => 'aag', 'Actinidia02578' => 'ach', 'Actinidia07693' => 'ach', 'Actinidia08413' => 'ach', 'Actinidia08414' => 'ach', 'Actinidia15289' => 'ach', 'Actinidia19871' => 'ach', 'Actinidia21475' => 'ach', 'Actinidia22576' => 'ach', 'Actinidia28327' => 'ach', 'Actinidia32491' => 'ach', 'Actinidia39463' => 'ach', 'Actinidia39571' => 'ach', 'Ah.01g013750' => 'amhyb', 'Ah.01g023210' => 'amhyb', 'Ah.04g164850' => 'amhyb', 'Ah.05g178060' => 'amhyb', 'Ah.07g204270' => 'amhyb', 'Ah.07g208480' => 'amhyb', 'Ah.09g237410' => 'amhyb', 'Ah.14g089460' => 'amhyb', 'AL1G41790' => 'aly', 'AL1G49050' => 'aly', 'AL1G53810' => 'aly', 'AL1G61400' => 'aly', 'AL4G18580' => 'aly', 'AL5G12510' => 'aly', 'AL5G12540' => 'aly', 'AL6G43230' => 'aly', 'AL7G10370' => 'aly', 'AL7G19250' => 'aly', 'AL8G12240' => 'aly', 'AL8G18540' => 'aly', 'Aqoxy1G02409' => 'aox', 'Aqoxy2G03993' => 'aox', 'Aqoxy3G03357' => 'aox', 'Aqoxy4G00785' => 'aox', 'Aqoxy5G02598' => 'aox', 'Aqoxy6G00132' => 'aox', 'Aqoxy7G01776' => 'aox', 'Aqoxy7G02316' => 'aox', 'Aqoxy7G03973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.12AFKW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B8730' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27IQR1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3F75VG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3RE0GA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41TCQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.527VTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FIR39' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5W8UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DA38EV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ63HS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H1I32C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HC27T5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4M8AP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7N3CZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9UVDZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LS1NQA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT1D4B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SKC4TM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCFV76' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF9Q1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQWD9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1ZM88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WE07RT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YCK7VH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJE6Q6' => 'arhy', 'AT1G28240' => 'ath', 'AT1G34550' => 'ath', 'AT1G53040' => 'ath', 'AT2G02910' => 'ath', 'AT4G09630' => 'ath', 'AT4G38500' => 'ath', 'AT5G42660' => 'ath', 'AT5G46220' => 'ath', 'ATR0152G026' => 'atr', 'ATR0564G343' => 'atr', 'ATR0706G151' => 'atr', 'ATR0733G207' => 'atr', 'ATR0751G234' => 'atr', 'ATR0807G048' => 'atr', 'ATR1091G084' => 'atr', 'Atru.chr10.1229' => 'acertr', 'Atru.chr10.1230' => 'acertr', 'Atru.chr10.1874' => 'acertr', 'Atru.chr11.1808' => 'acertr', 'Atru.chr13.1795' => 'acertr', 'Atru.chr13.570' => 'acertr', 'Atru.chr2.2608' => 'acertr', 'Atru.chr2.2609' => 'acertr', 'Atru.chr5.3428' => 'acertr', 'Atru.chr8.1171' => 'acertr', 'AUR62004651' => 'cqu', 'AUR62008675' => 'cqu', 'AUR62010014' => 'cqu', 'AUR62013004' => 'cqu', 'AUR62014825' => 'cqu', 'AUR62015015' => 'cqu', 'AUR62015151' => 'cqu', 'AUR62017020' => 'cqu', 'AUR62019422' => 'cqu', 'AUR62023570' => 'cqu', 'AUR62025571' => 'cqu', 'AUR62029098' => 'cqu', 'AUR62033863' => 'cqu', 'AUR62034296' => 'cqu', 'AUR62040075' => 'cqu', 'BcaB02g07334' => 'bca', 'BcaB02g10575' => 'bca', 'BcaB03g12119' => 'bca', 'BcaB03g12120' => 'bca', 'BcaB03g13945' => 'bca', 'BcaB04g17123' => 'bca', 'BcaB04g17867' => 'bca', 'BcaB04g19839' => 'bca', 'BcaB07g30317' => 'bca', 'BcaB07g32432' => 'bca', 'BcaB07g33362' => 'bca', 'BcaB08g36611' => 'bca', 'BcaC01g00028' => 'bca', 'BcaC01g01356' => 'bca', 'BcaC01g02034' => 'bca', 'BcaC01g06051' => 'bca', 'BcaC03g16839' => 'bca', 'BcaC03g17176' => 'bca', 'BcaC05g26829' => 'bca', 'BcaC06g31490' => 'bca', 'BcaC06g35344' => 'bca', 'BcaC06g36570' => 'bca', 'BcaC07g37537' => 'bca', 'BcaC08g43491' => 'bca', 'BcaC08g43773' => 'bca', 'BcaNung00234' => 'bca', 'BcaNung01982' => 'bca', 'BcaNung03707' => 'bca', 'BcaNung06454' => 'bca', 'BolC2t10762H' => 'bol', 'BolC2t11191H' => 'bol', 'BolC3t14322H' => 'bol', 'BolC3t19747H' => 'bol', 'BolC3t21425H' => 'bol', 'BolC4t27800H' => 'bol', 'BolC5t31423H' => 'bol', 'BolC6t35951H' => 'bol', 'BolC6t36282H' => 'bol', 'BolC7t40678H' => 'bol', 'BolC7t40679H' => 'bol', 'BolC7t42222H' => 'bol', 'BolC7t43492H' => 'bol', 'BolC7t46785H' => 'bol', 'BolC8t47853H' => 'bol', 'BolC9t56805H' => 'bol', 'BraA02t08000Z' => 'bra', 'BraA02t08341Z' => 'bra', 'BraA03t10936Z' => 'bra', 'BraA03t15657Z' => 'bra', 'BraA04t18100Z' => 'bra', 'BraA05t20523Z' => 'bra', 'BraA06t23353Z' => 'bra', 'BraA06t27473Z' => 'bra', 'BraA06t27769Z' => 'bra', 'BraA07t28928Z' => 'bra', 'BraA08t32236Z' => 'bra', 'BraA08t32841Z' => 'bra', 'BraA08t34524Z' => 'bra', 'BraA09t38742Z' => 'bra', 'BraA09t39295Z' => 'bra', 'C02p47180' => 'bna', 'C02p50990' => 'bna', 'C03p19360' => 'bna', 'C03p74950' => 'bna', 'C03p91000' => 'bna', 'C04p63260' => 'bna', 'C05p27050' => 'bna', 'C06p08750' => 'bna', 'C06p11490' => 'bna', 'C07p02820' => 'bna', 'C07p17180' => 'bna', 'C07p29440' => 'bna', 'C07p63730' => 'bna', 'C09p39260' => 'bna', 'CAN.G1164.34' => 'can', 'CAN.G1164.39' => 'can', 'CAN.G1530.3' => 'can', 'CAN.G162.61' => 'can', 'CAN.G176.6' => 'can', 'CAN.G289.49' => 'can', 'CAN.G370.21' => 'can', 'CAN.G370.22' => 'can', 'CAN.G371.117' => 'can', 'CAN.G58.37' => 'can', 'CAN.G588.98' => 'can', 'CANSAT21G2266' => 'cansat', 'CANSAT25G2799' => 'cansat', 'CANSAT35G0862' => 'cansat', 'CANSAT35G1704' => 'cansat', 'CANSAT35G1760' => 'cansat', 'CANSAT56G3971' => 'cansat', 'CANSAT56G4116' => 'cansat', 'CANSAT80G1259' => 'cansat', 'CARHR027730' => 'chi', 'CARHR033880' => 'chi', 'CARHR043270' => 'chi', 'CARHR145330' => 'chi', 'CARHR145340' => 'chi', 'CARHR175570' => 'chi', 'CARHR181570' => 'chi', 'CARHR258470' => 'chi', 'CARHR260490' => 'chi', 'CARHR294220' => 'chi', 'Carub.0001s2668' => 'cru', 'Carub.0001s3257' => 'cru', 'Carub.0001s4220' => 'cru', 'Carub.0005s0179' => 'cru', 'Carub.0006s2807' => 'cru', 'Carub.0007s0039' => 'cru', 'Carub.0008s0169' => 'cru', 'Carub.0008s0636' => 'cru', 'Ca_00338_v3' => 'car', 'Ca_00542_v3' => 'car', 'Ca_01844_v3' => 'car', 'Ca_10611_v3' => 'car', 'Ca_13326_v3' => 'car', 'Ca_17944_v3' => 'car', 'Ca_18546_v3' => 'car', 'Ca_24219_v3' => 'car', 'Ca_29972_v3' => 'car', 'CBR_g3681' => 'cbr', 'CBR_g40021' => 'cbr', 'Cc01_g08140' => 'ccan', 'Cc02_g13410' => 'ccan', 'Cc02_g37480' => 'ccan', 'Cc05_g12030' => 'ccan', 'Cc09_g03370' => 'ccan', 'Cc09_g10300' => 'ccan', 'Cc10_g03530' => 'ccan', 'Cc10_g11380' => 'ccan', 'CDE01G0176' => 'cde', 'CDE02G0675' => 'cde', 'CDE02G0942' => 'cde', 'CDE02G1153' => 'cde', 'CDE02G4177' => 'cde', 'CDE04G2117' => 'cde', 'CDE04G2736' => 'cde', 'CDE08G1161' => 'cde', 'CDE09G1238' => 'cde', 'Cfa000467' => 'cfa', 'Cfa000947' => 'cfa', 'Cfa004969' => 'cfa', 'Cfa005284' => 'cfa', 'Cfa008993' => 'cfa', 'Cfa018187' => 'cfa', 'Cfa018454' => 'cfa', 'Cfa020585' => 'cfa', 'Ciclev10000424m.g' => 'ccl', 'Ciclev10003605m.g' => 'ccl', 'Ciclev10007828m.g' => 'ccl', 'Ciclev10014620m.g' => 'ccl', 'Ciclev10015169m.g' => 'ccl', 'Ciclev10018291m.g' => 'ccl', 'Ciclev10028256m.g' => 'ccl', 'Ciclev10033822m.g' => 'ccl', 'CiPaw.05G060300' => 'cil', 'CiPaw.05G085000' => 'cil', 'CiPaw.06G083700' => 'cil', 'CiPaw.06G120300' => 'cil', 'CiPaw.09G060500' => 'cil', 'CiPaw.09G123800' => 'cil', 'CiPaw.11G169700' => 'cil', 'CiPaw.12G118300' => 'cil', 'CiPaw.15G071000' => 'cil', 'CiPaw.15G081900' => 'cil', 'ClCG01G024610' => 'cla', 'ClCG03G006070' => 'cla', 'ClCG05G019250' => 'cla', 'ClCG09G009500' => 'cla', 'ClCG11G008200' => 'cla', 'ClCG11G018080' => 'cla', 'COL.COLO4_17373' => 'col', 'COL.COLO4_22994' => 'col', 'COL.COLO4_26389' => 'col', 'COL.COLO4_27170' => 'col', 'COL.COLO4_31074' => 'col', 'COL.COLO4_31465' => 'col', 'COL.COLO4_36438' => 'col', 'COL.COLO4_36439' => 'col', 'Cpa.g.c38781' => 'cpa', 'Cpa.g.sc128.12' => 'cpa', 'Cpa.g.sc166.7' => 'cpa', 'Cpa.g.sc166.8' => 'cpa', 'Cpa.g.sc20.111' => 'cpa', 'Cpa.g.sc27.31' => 'cpa', 'Cpa.g.sc64.36' => 'cpa', 'Cpa.g.sc64.37' => 'cpa', 'Cpa.g.sc66.49' => 'cpa', 'Cpa.g.sc80.64' => 'cpa', 'CsaV3_1G012320' => 'csa', 'CsaV3_2G008480' => 'csa', 'CsaV3_2G033450' => 'csa', 'CsaV3_3G044830' => 'csa', 'CsaV3_4G033710' => 'csa', 'CsaV3_6G051730' => 'csa', 'CsaV3_7G025350' => 'csa', 'CSS0001067' => 'camsi', 'CSS0005996' => 'camsi', 'CSS0006590' => 'camsi', 'CSS0009673' => 'camsi', 'CSS0010201' => 'camsi', 'CSS0010549' => 'camsi', 'CSS0011364' => 'camsi', 'CSS0014473' => 'camsi', 'CSS0014961' => 'camsi', 'CSS0020191' => 'camsi', 'CSS0021165' => 'camsi', 'CSS0022306' => 'camsi', 'CSS0030591' => 'camsi', 'CSS0030696' => 'camsi', 'CSS0032653' => 'camsi', 'CSS0037487' => 'camsi', 'CSS0041102' => 'camsi', 'CSS0041261' => 'camsi', 'CSS0046246' => 'camsi', 'CSS0049256' => 'camsi', 'DCAR_004075' => 'dca', 'DCAR_011538' => 'dca', 'DCAR_019553' => 'dca', 'DCAR_020952' => 'dca', 'DCAR_021739' => 'dca', 'DCAR_027407' => 'dca', 'DCAR_027913' => 'dca', 'DCAR_028066' => 'dca', 'Dinv05899' => 'din', 'Dinv07563' => 'din', 'Dinv08010' => 'din', 'Dinv14125' => 'din', 'Dinv20172' => 'din', 'Dinv30743' => 'din', 'Dinv31229' => 'din', 'Dinv34162' => 'din', 'Dinv36028' => 'din', 'Dinv39368' => 'din', 'Dinv40565' => 'din', 'Dinv41706' => 'din', 'Duzib052G0089' => 'dzi', 'Duzib116G0641' => 'dzi', 'Duzib132G0069' => 'dzi', 'Duzib132G1219' => 'dzi', 'Duzib147G0278' => 'dzi', 'Duzib160G0480' => 'dzi', 'Duzib170G0661' => 'dzi', 'Duzib177G0591' => 'dzi', 'Duzib187G1353' => 'dzi', 'Duzib192G0858' => 'dzi', 'Duzib192G0883' => 'dzi', 'Duzib213G0506' => 'dzi', 'Duzib235G0289' => 'dzi', 'Duzib251G0422' => 'dzi', 'ECA232G3898' => 'eca', 'ECA233G5950' => 'eca', 'ECA234G1699' => 'eca', 'ECA234G2421' => 'eca', 'ECA236G0426' => 'eca', 'ECA236G4331' => 'eca', 'ECA248G2573' => 'eca', 'EL10Ac1g00077' => 'bvu', 'EL10Ac1g01746' => 'bvu', 'EL10Ac2g03464' => 'bvu', 'EL10Ac4g08176' => 'bvu', 'EL10Ac7g17521' => 'bvu', 'EL10Ac8g20386' => 'bvu', 'EL10Ac9g21343' => 'bvu', 'EL10Ac9g22688' => 'bvu', 'Eucgr.B03434' => 'egr', 'Eucgr.D00618' => 'egr', 'Eucgr.E02395' => 'egr', 'Eucgr.F01129' => 'egr', 'Eucgr.F02622' => 'egr', 'Eucgr.F04207' => 'egr', 'FAN01G0570' => 'fan', 'FAN03G3351' => 'fan', 'FAN06G3702' => 'fan', 'FAN07G2149' => 'fan', 'FAN10G3758' => 'fan', 'FAN11G1170' => 'fan', 'FAN11G2050' => 'fan', 'FAN11G2724' => 'fan', 'FAN12G1700' => 'fan', 'FAN12G2028' => 'fan', 'FAN15G1160' => 'fan', 'FAN15G3063' => 'fan', 'FAN16G2540' => 'fan', 'FAN16G3077' => 'fan', 'FAN16G3624' => 'fan', 'FAN17G0221' => 'fan', 'FAN20G2492' => 'fan', 'FAN20G2905' => 'fan', 'FAN21G0548' => 'fan', 'FAN21G1300' => 'fan', 'FAN22G0077' => 'fan', 'FAN22G1315' => 'fan', 'FAN24G1280' => 'fan', 'FAN24G1445' => 'fan', 'FAN24G3527' => 'fan', 'FAN25G0464' => 'fan', 'FAN25G2885' => 'fan', 'FAN25G3270' => 'fan', 'FAN27G1101' => 'fan', 'FAN27G2846' => 'fan', 'FAN27G3524' => 'fan', 'FvH4_2g11770' => 'fve', 'FvH4_2g15630' => 'fve', 'FvH4_3g05570' => 'fve', 'FvH4_3g09110' => 'fve', 'FvH4_3g19940' => 'fve', 'FvH4_4g04821' => 'fve', 'FvH4_4g31480' => 'fve', 'FvH4_7g01740' => 'fve', 'Glyma.05G130400' => 'gma', 'Glyma.05G156400' => 'gma', 'Glyma.07G197000' => 'gma', 'Glyma.08G085151' => 'gma', 'Glyma.08G114500' => 'gma', 'Glyma.08G300400' => 'gma', 'Glyma.10G215800' => 'gma', 'Glyma.12G224400' => 'gma', 'Glyma.13G179300' => 'gma', 'Glyma.13G218151' => 'gma', 'Glyma.13G238800' => 'gma', 'Glyma.13G276900' => 'gma', 'Glyma.14G078200' => 'gma', 'Glyma.15G074500' => 'gma', 'Glyma.15G094100' => 'gma', 'Glyma.17G247200' => 'gma', 'Glyma.18G120100' => 'gma', 'Glyma.20G176000' => 'gma', 'Gohir.A01G063600' => 'ghi', 'Gohir.A01G170301' => 'ghi', 'Gohir.A02G060500' => 'ghi', 'Gohir.A05G133850' => 'ghi', 'Gohir.A05G161400' => 'ghi', 'Gohir.A06G012900' => 'ghi', 'Gohir.A06G035901' => 'ghi', 'Gohir.A06G127100' => 'ghi', 'Gohir.A06G210500' => 'ghi', 'Gohir.A08G008650' => 'ghi', 'Gohir.A09G072700' => 'ghi', 'Gohir.A09G088301' => 'ghi', 'Gohir.A10G040600' => 'ghi', 'Gohir.A12G036300' => 'ghi', 'Gohir.A12G143350' => 'ghi', 'Gohir.A12G165500' => 'ghi', 'Gohir.A13G145700' => 'ghi', 'Gohir.D01G050000' => 'ghi', 'Gohir.D01G051366' => 'ghi', 'Gohir.D01G161350' => 'ghi', 'Gohir.D02G065900' => 'ghi', 'Gohir.D05G164200' => 'ghi', 'Gohir.D05G355500' => 'ghi', 'Gohir.D06G010400' => 'ghi', 'Gohir.D06G111250' => 'ghi', 'Gohir.D06G132000' => 'ghi', 'Gohir.D06G210500' => 'ghi', 'Gohir.D07G165675' => 'ghi', 'Gohir.D08G062240' => 'ghi', 'Gohir.D08G086101' => 'ghi', 'Gohir.D08G138060' => 'ghi', 'Gohir.D09G072300' => 'ghi', 'Gohir.D10G041400' => 'ghi', 'Gohir.D11G191020' => 'ghi', 'Gohir.D11G212066' => 'ghi', 'Gohir.D12G036300' => 'ghi', 'Gohir.D12G168600' => 'ghi', 'Gohir.D13G150600' => 'ghi', 'Gorai.001G057300' => 'gra', 'Gorai.002G069900' => 'gra', 'Gorai.002G200000' => 'gra', 'Gorai.003G067600' => 'gra', 'Gorai.005G074800' => 'gra', 'Gorai.006G087300' => 'gra', 'Gorai.008G037500' => 'gra', 'Gorai.008G181400' => 'gra', 'Gorai.009G169400' => 'gra', 'Gorai.009G387900' => 'gra', 'Gorai.010G013300' => 'gra', 'Gorai.010G153800' => 'gra', 'Gorai.010G255800' => 'gra', 'Gorai.011G043700' => 'gra', 'Gorai.011G198900' => 'gra', 'Gorai.013G168400' => 'gra', 'GSVIVG01005212001' => 'vvi', 'GSVIVG01006163001' => 'vvi', 'GSVIVG01009625001' => 'vvi', 'GSVIVG01014338001' => 'vvi', 'GSVIVG01020005001' => 'vvi', 'GSVIVG01021450001' => 'vvi', 'GSVIVG01023975001' => 'vvi', 'GSVIVG01034490001' => 'vvi', 'HanXRQChr04g0112071' => 'han', 'HanXRQChr05g0131151' => 'han', 'HanXRQChr09g0262371' => 'han', 'HanXRQChr09g0268401' => 'han', 'HanXRQChr10g0279241' => 'han', 'HanXRQChr10g0297961' => 'han', 'HanXRQChr11g0326231' => 'han', 'HanXRQChr11g0328471' => 'han', 'HanXRQChr16g0507941' => 'han', 'HanXRQChr17g0560211' => 'han', 'Haze_02108' => 'cav', 'Haze_02428' => 'cav', 'Haze_05593' => 'cav', 'Haze_06448' => 'cav', 'Haze_09427' => 'cav', 'Haze_12022' => 'cav', 'Haze_17612' => 'cav', 'Haze_17928' => 'cav', 'Hma1.2p1_0032F.1_g019250' => 'hma', 'Hma1.2p1_0163F.1_g072690' => 'hma', 'Hma1.2p1_0265F.1_g106710' => 'hma', 'Hma1.2p1_0286F.1_g113970' => 'hma', 'Hma1.2p1_0363F.1_g136640' => 'hma', 'Hma1.2p1_0584F.1_g183470' => 'hma', 'Hma1.2p1_0885F.1_g232570' => 'hma', 'HPP92_006022' => 'vpl', 'HPP92_007320' => 'vpl', 'HPP92_011521' => 'vpl', 'HPP92_019387' => 'vpl', 'HPP92_024038' => 'vpl', 'Hund05891' => 'sun', 'Hund06450' => 'sun', 'Hund12053' => 'sun', 'Hund16800' => 'sun', 'Hund21222' => 'sun', 'Hund22896' => 'sun', 'Hund23746' => 'sun', 'Hund27083' => 'sun', 'Lalb_Chr02g0141831' => 'lal', 'Lalb_Chr02g0141841' => 'lal', 'Lalb_Chr05g0220411' => 'lal', 'Lalb_Chr06g0162081' => 'lal', 'Lalb_Chr09g0327651' => 'lal', 'Lalb_Chr13g0295051' => 'lal', 'Lalb_Chr15g0086801' => 'lal', 'Lalb_Chr16g0383781' => 'lal', 'Lalb_Chr16g0383791' => 'lal', 'Lalb_Chr18g0055441' => 'lal', 'Lalb_Chr18g0059611' => 'lal', 'Lalb_Chr20g0109661' => 'lal', 'Lalb_Chr20g0109831' => 'lal', 'Lalb_Chr20g0121871' => 'lal', 'Lalb_Chr22g0355361' => 'lal', 'Lalb_Chr25g0286371' => 'lal', 'Lj1A1187G43' => 'lonja', 'Lj1A1205T50' => 'lonja', 'Lj1A800G33' => 'lonja', 'Lj1C1187T7' => 'lonja', 'Lj1C843T11' => 'lonja', 'Lj1g0010940' => 'lja', 'Lj2A288T69' => 'lonja', 'Lj3g0024276' => 'lja', 'Lj4A47T76' => 'lonja', 'Lj4g0005805' => 'lja', 'Lj4g0006097' => 'lja', 'Lj4g0008528' => 'lja', 'Lj4g0024907' => 'lja', 'Lj5g0012472' => 'lja', 'Lj5g0018648' => 'lja', 'Lj6C789G1' => 'lonja', 'Lj6g0004000' => 'lja', 'Lj7A292G67' => 'lonja', 'Lj7A292T64' => 'lonja', 'Lj9A400T58' => 'lonja', 'Lsat_1_v5_gn_1_126181' => 'lsa', 'Lsat_1_v5_gn_4_123041' => 'lsa', 'Lsat_1_v5_gn_4_133620' => 'lsa', 'Lsat_1_v5_gn_4_53221' => 'lsa', 'Lsat_1_v5_gn_4_71961' => 'lsa', 'Lsat_1_v5_gn_7_105241' => 'lsa', 'Lsat_1_v5_gn_7_21361' => 'lsa', 'Lsat_1_v5_gn_7_28860' => 'lsa', 'Lsat_1_v5_gn_7_31260' => 'lsa', 'Lsat_1_v5_gn_8_52801' => 'lsa', 'Manes.02G191400' => 'mes', 'Manes.03G110100' => 'mes', 'Manes.04G071100' => 'mes', 'Manes.05G100500' => 'mes', 'Manes.05G164700' => 'mes', 'Manes.15G087000' => 'mes', 'Manes.15G121500' => 'mes', 'Manes.16G028300' => 'mes', 'Manes.17G046100' => 'mes', 'Manes.17G069800' => 'mes', 'Manes.18G100500' => 'mes', 'Mapoly0002s0109' => 'mpo', 'Mapoly0024s0007' => 'mpo', 'Mapoly0089s0032' => 'mpo', 'MBI04_g42241_MAGBIO' => 'mbi', 'MBI05_g11988_MAGBIO' => 'mbi', 'MBI05_g35452_MAGBIO' => 'mbi', 'MBI07_g30179_MAGBIO' => 'mbi', 'MBI07_g35859_MAGBIO' => 'mbi', 'MBI07_g35860_MAGBIO' => 'mbi', 'MBI07_g37166_MAGBIO' => 'mbi', 'MBI08_g18172_MAGBIO' => 'mbi', 'MBI09_g08441_MAGBIO' => 'mbi', 'MBI13_g01676_MAGBIO' => 'mbi', 'MBI14_g42955_MAGBIO' => 'mbi', 'MBI16_g13161_MAGBIO' => 'mbi', 'MBI17_g27204_MAGBIO' => 'mbi', 'MBI19_g21595_MAGBIO' => 'mbi', 'MD00G1148400' => 'mdo', 'MD02G1301200' => 'mdo', 'MD03G1227800' => 'mdo', 'MD05G1041100' => 'mdo', 'MD05G1124800' => 'mdo', 'MD05G1284000' => 'mdo', 'MD05G1338800' => 'mdo', 'MD05G1338900' => 'mdo', 'MD07G1022800' => 'mdo', 'MD10G1047500' => 'mdo', 'MD10G1127500' => 'mdo', 'MD10G1262300' => 'mdo', 'MD10G1293800' => 'mdo', 'MD16G1074300' => 'mdo', 'Medtr1g021670' => 'mtr', 'Medtr1g096320' => 'mtr', 'Medtr2g013690' => 'mtr', 'Medtr2g019450' => 'mtr', 'Medtr2g085170' => 'mtr', 'Medtr4g088785' => 'mtr', 'Medtr8g055930' => 'mtr', 'Medtr8g085850' => 'mtr', 'MELO3C002605.2' => 'cme', 'MELO3C003891.2' => 'cme', 'MELO3C004012.2' => 'cme', 'MELO3C007134.2' => 'cme', 'MELO3C008118.2' => 'cme', 'MELO3C016700.2' => 'cme', 'MELO3C024127.2' => 'cme', 'MELO3C033361.2' => 'cme', 'MELO3C033362.2' => 'cme', 'Migut.C00430' => 'egut', 'Migut.C01246' => 'egut', 'Migut.E00101' => 'egut', 'Migut.H01486' => 'egut', 'Migut.H01939' => 'egut', 'Migut.K00360' => 'egut', 'Migut.M00910' => 'egut', 'Migut.M01139' => 'egut', 'Migut.N02677' => 'egut', 'MSTRG.13252' => 'ama', 'MSTRG.14701' => 'ama', 'MSTRG.1521' => 'ama', 'MSTRG.15884' => 'ama', 'MSTRG.16242' => 'ama', 'MSTRG.22285' => 'ama', 'MSTRG.22444' => 'ama', 'MSTRG.2349' => 'ama', 'MSTRG.26308' => 'ama', 'MSTRG.28296' => 'ama', 'MSTRG.9895' => 'ama', 'Nitab4.5_0000110g0060' => 'nta', 'Nitab4.5_0000420g0130' => 'nta', 'Nitab4.5_0000422g0030' => 'nta', 'Nitab4.5_0000560g0180' => 'nta', 'Nitab4.5_0000703g0100' => 'nta', 'Nitab4.5_0000786g0200' => 'nta', 'Nitab4.5_0001336g0020' => 'nta', 'Nitab4.5_0001796g0030' => 'nta', 'Nitab4.5_0003348g0060' => 'nta', 'Nitab4.5_0003698g0040' => 'nta', 'Nitab4.5_0003942g0090' => 'nta', 'Nitab4.5_0004775g0070' => 'nta', 'Nitab4.5_0004864g0030' => 'nta', 'Nitab4.5_0005615g0020' => 'nta', 'Nitab4.5_0009288g0030' => 'nta', 'Nitab4.5_0009341g0010' => 'nta', 'Nitab4.5_0009535g0010' => 'nta', 'Nn1g03995' => 'nnu', 'Nn1g04100' => 'nnu', 'Nn1g06530' => 'nnu', 'Nn3g16404' => 'nnu', 'Nn3g17212' => 'nnu', 'Nn3g20776' => 'nnu', 'Nn3g21923' => 'nnu', 'Nn5g27737' => 'nnu', 'Nn5g29461' => 'nnu', 'Nn7g38355' => 'nnu', 'Nn8g39873' => 'nnu', 'Oeu000548.2' => 'oeu', 'Oeu004672.1' => 'oeu', 'Oeu015605.2' => 'oeu', 'Oeu016092.1' => 'oeu', 'Oeu017879.3' => 'oeu', 'Oeu024910.1' => 'oeu', 'Oeu028965.1' => 'oeu', 'Oeu031269.1' => 'oeu', 'Oeu031270.1' => 'oeu', 'Oeu032535.1' => 'oeu', 'Oeu034151.1' => 'oeu', 'Oeu034152.1' => 'oeu', 'Oeu034588.2' => 'oeu', 'Oeu050846.1' => 'oeu', 'Oeu050849.2' => 'oeu', 'Oeu051063.2' => 'oeu', 'Oeu052368.1' => 'oeu', 'Oeu052370.1' => 'oeu', 'Os01g0210400' => 'osa', 'Os01g0304300' => 'osa', 'Os01g0749100' => 'osa', 'Os02g0745800' => 'osa', 'Os03g0769050' => 'osa', 'Os05g0531500' => 'osa', 'Os06g0724300' => 'osa', 'Os11g0198100' => 'osa', 'Peaxi162Scf00069g01425' => 'pax', 'Peaxi162Scf00280g00811' => 'pax', 'Peaxi162Scf00310g00615' => 'pax', 'Peaxi162Scf00362g00542' => 'pax', 'Peaxi162Scf00461g00310' => 'pax', 'Peaxi162Scf00530g00118' => 'pax', 'Peaxi162Scf00541g00057' => 'pax', 'Peaxi162Scf00661g00017' => 'pax', 'Peaxi162Scf00926g00027' => 'pax', 'Peaxi162Scf01064g00263' => 'pax', 'Peaxi162Scf01211g00135' => 'pax', 'PGR004G2336' => 'pgr', 'PGR042G0327' => 'pgr', 'PGR042G1957' => 'pgr', 'PGR042G2003' => 'pgr', 'PGR042G3929' => 'pgr', 'PGR083G1137' => 'pgr', 'PGR083G1364' => 'pgr', 'PGSC0003DMG400003381' => 'stu', 'PGSC0003DMG400003417' => 'stu', 'PGSC0003DMG400008981' => 'stu', 'PGSC0003DMG400012417' => 'stu', 'PGSC0003DMG400012823' => 'stu', 'PGSC0003DMG400016885' => 'stu', 'PGSC0003DMG400022812' => 'stu', 'PGSC0003DMG400029726' => 'stu', 'PGSC0003DMG401009243' => 'stu', 'PGSC0003DMG401031505' => 'stu', 'PGSC0003DMG402031505' => 'stu', 'Phvul.001G017600' => 'pvu', 'Phvul.002G193500' => 'pvu', 'Phvul.002G228900' => 'pvu', 'Phvul.002G236800' => 'pvu', 'Phvul.003G049500' => 'pvu', 'Phvul.005G072000' => 'pvu', 'Phvul.006G164800' => 'pvu', 'Phvul.006G185100' => 'pvu', 'Phvul.007G090000' => 'pvu', 'Potri.001G399800' => 'ptr', 'Potri.002G149900' => 'ptr', 'Potri.004G044100' => 'ptr', 'Potri.004G177600' => 'ptr', 'Potri.009G138000' => 'ptr', 'Potri.010G094000' => 'ptr', 'Potri.011G053000' => 'ptr', 'Potri.011G119300' => 'ptr', 'Potri.013G113700' => 'ptr', 'Potri.018G107800' => 'ptr', 'Potri.019G084100' => 'ptr', 'Pp3c14_23720' => 'ppa', 'Pp3c16_6340' => 'ppa', 'Pp3c23_13420' => 'ppa', 'Pp3c24_2740' => 'ppa', 'Pp3c25_860' => 'ppa', 'Pp3c8_21750' => 'ppa', 'Prupe.1G273000' => 'ppe', 'Prupe.1G273700' => 'ppe', 'Prupe.1G274100' => 'ppe', 'Prupe.2G023300' => 'ppe', 'Prupe.4G048000' => 'ppe', 'Prupe.4G080400' => 'ppe', 'Prupe.4G181200' => 'ppe', 'Prupe.8G056900' => 'ppe', 'Prupe.8G168700' => 'ppe', 'Psat1g189080' => 'psa', 'Psat1g204760' => 'psa', 'Psat4g175560' => 'psa', 'Psat4g177720' => 'psa', 'Psat5g244240' => 'psa', 'Psat6g010720' => 'psa', 'Psat6g187200' => 'psa', 'Psat7g072040' => 'psa', 'PSO017G3501' => 'pso', 'PSO063G2148' => 'pso', 'PSO063G5608' => 'pso', 'PSO210G6392' => 'pso', 'PSO541G2319' => 'pso', 'PSO541G2836' => 'pso', 'PSO541G4012' => 'pso', 'PSO541G6253' => 'pso', 'PSO675G0580' => 'pso', 'PSO675G0856' => 'pso', 'PSO675G5635' => 'pso', 'PSO675G9157' => 'pso', 'PSO832G1660' => 'pso', 'PSO832G1969' => 'pso', 'QL02p007186' => 'qlo', 'QL02p033904' => 'qlo', 'QL03p064391' => 'qlo', 'QL05p040593' => 'qlo', 'QL05p058242' => 'qlo', 'QL08p021825' => 'qlo', 'QL11p004981' => 'qlo', 'RcHm_v2.0_Chr1g0318301' => 'rch', 'RcHm_v2.0_Chr4g0418501' => 'rch', 'RcHm_v2.0_Chr4g0439971' => 'rch', 'RcHm_v2.0_Chr5g0008541' => 'rch', 'RcHm_v2.0_Chr5g0014101' => 'rch', 'RcHm_v2.0_Chr5g0014131' => 'rch', 'RcHm_v2.0_Chr5g0033621' => 'rch', 'RcHm_v2.0_Chr6g0272041' => 'rch', 'RcHm_v2.0_Chr6g0278831' => 'rch', 'Rhsim02G0130400' => 'rsi', 'Rhsim02G0171100' => 'rsi', 'Rhsim05G0053000' => 'rsi', 'Rhsim05G0053100' => 'rsi', 'Rhsim06G0096500' => 'rsi', 'Rhsim06G0096600' => 'rsi', 'Rhsim06G0199100' => 'rsi', 'Rhsim12G0062300' => 'rsi', 'Rhsim12G0062800' => 'rsi', 'Sabra02G0118600' => 'sbr', 'Sabra04G0027300' => 'sbr', 'Sabra04G0119500' => 'sbr', 'Sabra08G0112500' => 'sbr', 'Sabra11G0036800' => 'sbr', 'Sabra11G0103800' => 'sbr', 'Sabra13G0096300' => 'sbr', 'Sabra16G0262300' => 'sbr', 'Sabra18G0091700' => 'sbr', 'Sabra19G0095400' => 'sbr', 'SalBow6G3080' => 'sbo', 'SalBow7G1157' => 'sbo', 'SalBow7G2123' => 'sbo', 'SalBow7G2285' => 'sbo', 'SalBow7G3537' => 'sbo', 'SalBow8G2947' => 'sbo', 'SalBow8G4463' => 'sbo', 'SalBow8G5466' => 'sbo', 'Sc01g0001750' => 'sci', 'Sc02g0006640' => 'sci', 'Sc02g0006670' => 'sci', 'Sc04g0008220' => 'sci', 'Sc05g0006190' => 'sci', 'Sc08g0002760' => 'sci', 'Sc17g0006170' => 'sci', 'Sc22g0002050' => 'sci', 'Sc23g0001190' => 'sci', 'Sc24g0000980' => 'sci', 'Sed0006245' => 'sed', 'Sed0007543' => 'sed', 'Sed0009411' => 'sed', 'Sed0010765' => 'sed', 'Sed0012944' => 'sed', 'Sed0014682' => 'sed', 'Sed0016174' => 'sed', 'Sed0016796' => 'sed', 'Sed0020317' => 'sed', 'Sed0021467' => 'sed', 'SEGI_01316' => 'sgi', 'SEGI_03374' => 'sgi', 'SEGI_16265' => 'sgi', 'SEGI_18569' => 'sgi', 'SEGI_20351' => 'sgi', 'SEGI_26395' => 'sgi', 'SEGI_29469' => 'sgi', 'SEGI_34771' => 'sgi', 'SEGI_36769' => 'sgi', 'SEGI_37139' => 'sgi', 'SGA_v2.0_scaffold100G29687' => 'sas', 'SGA_v2.0_scaffold118G32472' => 'sas', 'SGA_v2.0_scaffold14G07051' => 'sas', 'SGA_v2.0_scaffold183G39845' => 'sas', 'SGA_v2.0_scaffold1G00174' => 'sas', 'SGA_v2.0_scaffold22G09714' => 'sas', 'SGA_v2.0_scaffold333G48992' => 'sas', 'SGA_v2.0_scaffold46G17491' => 'sas', 'SGA_v2.0_scaffold49G18294' => 'sas', 'SGA_v2.0_scaffold63G21658' => 'sas', 'SHI01741' => 'shi', 'SHI05771' => 'shi', 'SHI18077' => 'shi', 'SHI20525' => 'shi', 'SHI20527' => 'shi', 'SHI20528' => 'shi', 'SMO172G0185' => 'smo', 'SMO198G0020' => 'smo', 'SMO351G0006' => 'smo', 'SMO356G0118' => 'smo', 'SMO358G0296' => 'smo', 'SMO367G0079' => 'smo', 'SMO367G1277' => 'smo', 'Solyc01g014220.3' => 'sly', 'Solyc01g111770.2' => 'sly', 'Solyc02g078180.3' => 'sly', 'Solyc03g006430.3' => 'sly', 'Solyc03g006456.1' => 'sly', 'Solyc03g079860.2' => 'sly', 'Solyc04g079770.3' => 'sly', 'Solyc05g007430.4' => 'sly', 'Solyc07g063150.3' => 'sly', 'Solyc08g016620.3' => 'sly', 'Solyc09g057590.3' => 'sly', 'Solyc09g057600.1' => 'sly', 'Solyc10g009050.3' => 'sly', 'Solyc11g017420.2' => 'sly', 'Sopen01g053810' => 'spe', 'Sopen02g023040' => 'spe', 'Sopen03g002440' => 'spe', 'Sopen04g033350' => 'spe', 'Sopen05g003310' => 'spe', 'Sopen07g004050' => 'spe', 'Sopen07g031340' => 'spe', 'Sopen08g006990' => 'spe', 'Sopen10g004830' => 'spe', 'Sopen11g009370' => 'spe', 'Sp1g24450' => 'spa', 'Sp1g29670' => 'spa', 'Sp1g39600' => 'spa', 'Sp2g11080' => 'spa', 'Sp2g13970' => 'spa', 'Sp4g16130' => 'spa', 'Sp6g13080' => 'spa', 'Sp7g37270' => 'spa', 'TAR371G0065' => 'tar', 'TAR376G0340' => 'tar', 'TAR376G0435' => 'tar', 'TAR381G0002' => 'tar', 'TAR381G1236' => 'tar', 'TAR624G0055' => 'tar', 'TAR624G0324' => 'tar', 'TAR624G0696' => 'tar', 'TAR624G0906' => 'tar', 'TAR625G0107' => 'tar', 'TAR626G0015' => 'tar', 'TAR626G1356' => 'tar', 'TAR627G0888' => 'tar', 'TAR628G0399' => 'tar', 'TAR628G1327' => 'tar', 'TAR629G2831' => 'tar', 'TAR629G2874' => 'tar', 'TAR633G1432' => 'tar', 'TAR633G2771' => 'tar', 'THA.LOC104803394' => 'tha', 'THA.LOC104805153' => 'tha', 'THA.LOC104806784' => 'tha', 'THA.LOC104810473' => 'tha', 'THA.LOC104813100' => 'tha', 'THA.LOC104814215' => 'tha', 'THA.LOC104815554' => 'tha', 'THA.LOC104820544' => 'tha', 'THA.LOC104824754' => 'tha', 'THA.LOC104827717' => 'tha', 'Thecc.02G031400' => 'tca', 'Thecc.02G055900' => 'tca', 'Thecc.02G350800' => 'tca', 'Thecc.06G150900' => 'tca', 'Thecc.06G186600' => 'tca', 'Thecc.07G089600' => 'tca', 'Thecc.08G020400' => 'tca', 'Thecc.08G182100' => 'tca', 'Thhalv10000873m.g' => 'esa', 'Thhalv10004185m.g' => 'esa', 'Thhalv10006981m.g' => 'esa', 'Thhalv10007204m.g' => 'esa', 'Thhalv10011374m.g' => 'esa', 'Thhalv10013482m.g' => 'esa', 'Thhalv10017801m.g' => 'esa', 'Thhalv10024983m.g' => 'esa', 'TPR.G12072' => 'tpr', 'TPR.G15769' => 'tpr', 'TPR.G16504' => 'tpr', 'TPR.G16506' => 'tpr', 'TPR.G24345' => 'tpr', 'TPR.G26666' => 'tpr', 'TPR.G27320' => 'tpr', 'TPR.G31819' => 'tpr', 'TPR.G38879' => 'tpr', 'TPR.G39015' => 'tpr', 'TPR.G8819' => 'tpr', 'TWI09G0924' => 'twi', 'TWI12G0811' => 'twi', 'TWI12G1294' => 'twi', 'TWI31G0150' => 'twi', 'TWI36G1262' => 'twi', 'TWI38G1287' => 'twi', 'TWI38G1633' => 'twi', 'TWI38G1982' => 'twi', 'TWI39G0116' => 'twi', 'TWI60G1011' => 'twi', 'TWI63G0171' => 'twi', 'TWI73G0839' => 'twi', 'TWI79G1511' => 'twi', 'unitig_0.g915' => 'ugi', 'unitig_0.g916' => 'ugi', 'unitig_21.g20219' => 'ugi', 'unitig_21.g20416' => 'ugi', 'unitig_578.g16132' => 'ugi', 'unitig_578.g16718' => 'ugi', 'unitig_62.g23481' => 'ugi', 'unitig_744.g24535' => 'ugi', 'unitig_749.g13525' => 'ugi', 'vmacro01248' => 'vma', 'vmacro02290' => 'vma', 'vmacro10946' => 'vma', 'vmacro11865' => 'vma', 'vmacro12493' => 'vma', 'vmacro17322' => 'vma', 'vmacro21599' => 'vma', 'vmacro23041' => 'vma', 'VMungo0251G0004' => 'vmu', 'VMungo0251G2639' => 'vmu', 'VMungo0251G2967' => 'vmu', 'VMungo0540G0864' => 'vmu', 'VMungo0540G1569' => 'vmu', 'VMungo0647G0317' => 'vmu', 'VMungo0720G1373' => 'vmu', 'VMungo0720G1508' => 'vmu', 'VMungo1080G0485' => 'vmu', 'VMungo1215G3177' => 'vmu', 'Zm00001eb112600' => 'zma', 'Zm00001eb120220' => 'zma', 'Zm00001eb153240' => 'zma', 'Zm00001eb168880' => 'zma', 'Zm00001eb213920' => 'zma', 'Zm00001eb228280' => 'zma', 'Zm00001eb254580' => 'zma', 'Zm00001eb272180' => 'zma', 'Zm00001eb293190' => 'zma', 'Zm00001eb322930' => 'zma', 'Zm00001eb353360' => 'zma', 'Zm00001eb353390' => 'zma', 'Zm00001eb353430' => 'zma', 'Zm00001eb353440' => 'zma', 'Zm00001eb353780' => 'zma' ) $gf_id = 'HOM05D000499' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000499' ) $data_identifier = 'HOM05D000499' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 29, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 12, 'amhyb' => (int) 8, 'aly' => (int) 12, 'aox' => (int) 9, 'arhy' => (int) 26, 'ath' => (int) 8, 'atr' => (int) 7, 'acertr' => (int) 10, 'cqu' => (int) 15, 'bca' => (int) 29, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 11, 'cansat' => (int) 8, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 9, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 8, 'cpa' => (int) 10, 'csa' => (int) 7, 'camsi' => (int) 20, 'dca' => (int) 8, 'din' => (int) 12, 'dzi' => (int) 14, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 6, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 38, 'gra' => (int) 16, 'vvi' => (int) 8, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 5, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 11, 'lja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 11, 'mpo' => (int) 3, 'mbi' => (int) 14, 'mdo' => (int) 14, 'mtr' => (int) 8, 'cme' => (int) 9, 'egut' => (int) 9, 'ama' => (int) 11, 'nta' => (int) 17, 'nnu' => (int) 11, 'oeu' => (int) 18, 'osa' => (int) 8, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 6, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 9, 'rsi' => (int) 9, 'sbr' => (int) 10, 'sbo' => (int) 8, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 10, 'sas' => (int) 10, 'shi' => (int) 6, 'smo' => (int) 7, 'sly' => (int) 14, 'spe' => (int) 10, 'spa' => (int) 8, 'tar' => (int) 19, 'tha' => (int) 10, 'tca' => (int) 8, 'esa' => (int) 8, 'tpr' => (int) 11, 'twi' => (int) 13, 'ugi' => (int) 9, 'vma' => (int) 8, 'vmu' => (int) 10, 'zma' => (int) 15 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb353780' $species_info = array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ) $local_species = 'smo' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000499', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1066', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p29780' => 'bna', 'A02p33180' => 'bna', 'A03p16470' => 'bna', 'A03p66010' => 'bna', 'A04p25970' => 'bna', 'A06p01270' => 'bna', 'A06p46080' => 'bna', 'A07p11400' => 'bna', 'A08p01840' => 'bna', 'A08p08230' => 'bna', 'A08p25740' => 'bna', 'A09p32070' => 'bna', 'A09p37830' => 'bna', 'A09p42840' => 'bna', 'A09p42850' => 'bna', 'Aa31LG10G2060' => 'aar', 'Aa31LG2G7410' => 'aar', 'Aa31LG6G10200' => 'aar', 'Aa31LG6G16680' => 'aar', 'Aa31LG6G8470' => 'aar', 'Aa31LG9G12730' => 'aar', 'Aa31LG9G13680' => 'aar', 'Aa31LG9G14920' => 'aar', 'Aa31LG9G6650' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4977' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5467' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3254' => 'aag', 'Actinidia02578' => 'ach', 'Actinidia07693' => 'ach', 'Actinidia08413' => 'ach', 'Actinidia08414' => 'ach', 'Actinidia15289' => 'ach', 'Actinidia19871' => 'ach', 'Actinidia21475' => 'ach', 'Actinidia22576' => 'ach', 'Actinidia28327' => 'ach', 'Actinidia32491' => 'ach', 'Actinidia39463' => 'ach', 'Actinidia39571' => 'ach', 'Ah.01g013750' => 'amhyb', 'Ah.01g023210' => 'amhyb', 'Ah.04g164850' => 'amhyb', 'Ah.05g178060' => 'amhyb', 'Ah.07g204270' => 'amhyb', 'Ah.07g208480' => 'amhyb', 'Ah.09g237410' => 'amhyb', 'Ah.14g089460' => 'amhyb', 'AL1G41790' => 'aly', 'AL1G49050' => 'aly', 'AL1G53810' => 'aly', 'AL1G61400' => 'aly', 'AL4G18580' => 'aly', 'AL5G12510' => 'aly', 'AL5G12540' => 'aly', 'AL6G43230' => 'aly', 'AL7G10370' => 'aly', 'AL7G19250' => 'aly', 'AL8G12240' => 'aly', 'AL8G18540' => 'aly', 'Aqoxy1G02409' => 'aox', 'Aqoxy2G03993' => 'aox', 'Aqoxy3G03357' => 'aox', 'Aqoxy4G00785' => 'aox', 'Aqoxy5G02598' => 'aox', 'Aqoxy6G00132' => 'aox', 'Aqoxy7G01776' => 'aox', 'Aqoxy7G02316' => 'aox', 'Aqoxy7G03973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.12AFKW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B8730' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27IQR1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3F75VG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3RE0GA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41TCQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.527VTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FIR39' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5W8UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DA38EV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ63HS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H1I32C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HC27T5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4M8AP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7N3CZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9UVDZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LS1NQA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT1D4B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SKC4TM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCFV76' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF9Q1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQWD9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1ZM88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WE07RT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YCK7VH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJE6Q6' => 'arhy', 'AT1G28240' => 'ath', 'AT1G34550' => 'ath', 'AT1G53040' => 'ath', 'AT2G02910' => 'ath', 'AT4G09630' => 'ath', 'AT4G38500' => 'ath', 'AT5G42660' => 'ath', 'AT5G46220' => 'ath', 'ATR0152G026' => 'atr', 'ATR0564G343' => 'atr', 'ATR0706G151' => 'atr', 'ATR0733G207' => 'atr', 'ATR0751G234' => 'atr', 'ATR0807G048' => 'atr', 'ATR1091G084' => 'atr', 'Atru.chr10.1229' => 'acertr', 'Atru.chr10.1230' => 'acertr', 'Atru.chr10.1874' => 'acertr', 'Atru.chr11.1808' => 'acertr', 'Atru.chr13.1795' => 'acertr', 'Atru.chr13.570' => 'acertr', 'Atru.chr2.2608' => 'acertr', 'Atru.chr2.2609' => 'acertr', 'Atru.chr5.3428' => 'acertr', 'Atru.chr8.1171' => 'acertr', 'AUR62004651' => 'cqu', 'AUR62008675' => 'cqu', 'AUR62010014' => 'cqu', 'AUR62013004' => 'cqu', 'AUR62014825' => 'cqu', 'AUR62015015' => 'cqu', 'AUR62015151' => 'cqu', 'AUR62017020' => 'cqu', 'AUR62019422' => 'cqu', 'AUR62023570' => 'cqu', 'AUR62025571' => 'cqu', 'AUR62029098' => 'cqu', 'AUR62033863' => 'cqu', 'AUR62034296' => 'cqu', 'AUR62040075' => 'cqu', 'BcaB02g07334' => 'bca', 'BcaB02g10575' => 'bca', 'BcaB03g12119' => 'bca', 'BcaB03g12120' => 'bca', 'BcaB03g13945' => 'bca', 'BcaB04g17123' => 'bca', 'BcaB04g17867' => 'bca', 'BcaB04g19839' => 'bca', 'BcaB07g30317' => 'bca', 'BcaB07g32432' => 'bca', 'BcaB07g33362' => 'bca', 'BcaB08g36611' => 'bca', 'BcaC01g00028' => 'bca', 'BcaC01g01356' => 'bca', 'BcaC01g02034' => 'bca', 'BcaC01g06051' => 'bca', 'BcaC03g16839' => 'bca', 'BcaC03g17176' => 'bca', 'BcaC05g26829' => 'bca', 'BcaC06g31490' => 'bca', 'BcaC06g35344' => 'bca', 'BcaC06g36570' => 'bca', 'BcaC07g37537' => 'bca', 'BcaC08g43491' => 'bca', 'BcaC08g43773' => 'bca', 'BcaNung00234' => 'bca', 'BcaNung01982' => 'bca', 'BcaNung03707' => 'bca', 'BcaNung06454' => 'bca', 'BolC2t10762H' => 'bol', 'BolC2t11191H' => 'bol', 'BolC3t14322H' => 'bol', 'BolC3t19747H' => 'bol', 'BolC3t21425H' => 'bol', 'BolC4t27800H' => 'bol', 'BolC5t31423H' => 'bol', 'BolC6t35951H' => 'bol', 'BolC6t36282H' => 'bol', 'BolC7t40678H' => 'bol', 'BolC7t40679H' => 'bol', 'BolC7t42222H' => 'bol', 'BolC7t43492H' => 'bol', 'BolC7t46785H' => 'bol', 'BolC8t47853H' => 'bol', 'BolC9t56805H' => 'bol', 'BraA02t08000Z' => 'bra', 'BraA02t08341Z' => 'bra', 'BraA03t10936Z' => 'bra', 'BraA03t15657Z' => 'bra', 'BraA04t18100Z' => 'bra', 'BraA05t20523Z' => 'bra', 'BraA06t23353Z' => 'bra', 'BraA06t27473Z' => 'bra', 'BraA06t27769Z' => 'bra', 'BraA07t28928Z' => 'bra', 'BraA08t32236Z' => 'bra', 'BraA08t32841Z' => 'bra', 'BraA08t34524Z' => 'bra', 'BraA09t38742Z' => 'bra', 'BraA09t39295Z' => 'bra', 'C02p47180' => 'bna', 'C02p50990' => 'bna', 'C03p19360' => 'bna', 'C03p74950' => 'bna', 'C03p91000' => 'bna', 'C04p63260' => 'bna', 'C05p27050' => 'bna', 'C06p08750' => 'bna', 'C06p11490' => 'bna', 'C07p02820' => 'bna', 'C07p17180' => 'bna', 'C07p29440' => 'bna', 'C07p63730' => 'bna', 'C09p39260' => 'bna', 'CAN.G1164.34' => 'can', 'CAN.G1164.39' => 'can', 'CAN.G1530.3' => 'can', 'CAN.G162.61' => 'can', 'CAN.G176.6' => 'can', 'CAN.G289.49' => 'can', 'CAN.G370.21' => 'can', 'CAN.G370.22' => 'can', 'CAN.G371.117' => 'can', 'CAN.G58.37' => 'can', 'CAN.G588.98' => 'can', 'CANSAT21G2266' => 'cansat', 'CANSAT25G2799' => 'cansat', 'CANSAT35G0862' => 'cansat', 'CANSAT35G1704' => 'cansat', 'CANSAT35G1760' => 'cansat', 'CANSAT56G3971' => 'cansat', 'CANSAT56G4116' => 'cansat', 'CANSAT80G1259' => 'cansat', 'CARHR027730' => 'chi', 'CARHR033880' => 'chi', 'CARHR043270' => 'chi', 'CARHR145330' => 'chi', 'CARHR145340' => 'chi', 'CARHR175570' => 'chi', 'CARHR181570' => 'chi', 'CARHR258470' => 'chi', 'CARHR260490' => 'chi', 'CARHR294220' => 'chi', 'Carub.0001s2668' => 'cru', 'Carub.0001s3257' => 'cru', 'Carub.0001s4220' => 'cru', 'Carub.0005s0179' => 'cru', 'Carub.0006s2807' => 'cru', 'Carub.0007s0039' => 'cru', 'Carub.0008s0169' => 'cru', 'Carub.0008s0636' => 'cru', 'Ca_00338_v3' => 'car', 'Ca_00542_v3' => 'car', 'Ca_01844_v3' => 'car', 'Ca_10611_v3' => 'car', 'Ca_13326_v3' => 'car', 'Ca_17944_v3' => 'car', 'Ca_18546_v3' => 'car', 'Ca_24219_v3' => 'car', 'Ca_29972_v3' => 'car', 'CBR_g3681' => 'cbr', 'CBR_g40021' => 'cbr', 'Cc01_g08140' => 'ccan', 'Cc02_g13410' => 'ccan', 'Cc02_g37480' => 'ccan', 'Cc05_g12030' => 'ccan', 'Cc09_g03370' => 'ccan', 'Cc09_g10300' => 'ccan', 'Cc10_g03530' => 'ccan', 'Cc10_g11380' => 'ccan', 'CDE01G0176' => 'cde', 'CDE02G0675' => 'cde', 'CDE02G0942' => 'cde', 'CDE02G1153' => 'cde', 'CDE02G4177' => 'cde', 'CDE04G2117' => 'cde', 'CDE04G2736' => 'cde', 'CDE08G1161' => 'cde', 'CDE09G1238' => 'cde', 'Cfa000467' => 'cfa', 'Cfa000947' => 'cfa', 'Cfa004969' => 'cfa', 'Cfa005284' => 'cfa', 'Cfa008993' => 'cfa', 'Cfa018187' => 'cfa', 'Cfa018454' => 'cfa', 'Cfa020585' => 'cfa', 'Ciclev10000424m.g' => 'ccl', 'Ciclev10003605m.g' => 'ccl', 'Ciclev10007828m.g' => 'ccl', 'Ciclev10014620m.g' => 'ccl', 'Ciclev10015169m.g' => 'ccl', 'Ciclev10018291m.g' => 'ccl', 'Ciclev10028256m.g' => 'ccl', 'Ciclev10033822m.g' => 'ccl', 'CiPaw.05G060300' => 'cil', 'CiPaw.05G085000' => 'cil', 'CiPaw.06G083700' => 'cil', 'CiPaw.06G120300' => 'cil', 'CiPaw.09G060500' => 'cil', 'CiPaw.09G123800' => 'cil', 'CiPaw.11G169700' => 'cil', 'CiPaw.12G118300' => 'cil', 'CiPaw.15G071000' => 'cil', 'CiPaw.15G081900' => 'cil', 'ClCG01G024610' => 'cla', 'ClCG03G006070' => 'cla', 'ClCG05G019250' => 'cla', 'ClCG09G009500' => 'cla', 'ClCG11G008200' => 'cla', 'ClCG11G018080' => 'cla', 'COL.COLO4_17373' => 'col', 'COL.COLO4_22994' => 'col', 'COL.COLO4_26389' => 'col', 'COL.COLO4_27170' => 'col', 'COL.COLO4_31074' => 'col', 'COL.COLO4_31465' => 'col', 'COL.COLO4_36438' => 'col', 'COL.COLO4_36439' => 'col', 'Cpa.g.c38781' => 'cpa', 'Cpa.g.sc128.12' => 'cpa', 'Cpa.g.sc166.7' => 'cpa', 'Cpa.g.sc166.8' => 'cpa', 'Cpa.g.sc20.111' => 'cpa', 'Cpa.g.sc27.31' => 'cpa', 'Cpa.g.sc64.36' => 'cpa', 'Cpa.g.sc64.37' => 'cpa', 'Cpa.g.sc66.49' => 'cpa', 'Cpa.g.sc80.64' => 'cpa', 'CsaV3_1G012320' => 'csa', 'CsaV3_2G008480' => 'csa', 'CsaV3_2G033450' => 'csa', 'CsaV3_3G044830' => 'csa', 'CsaV3_4G033710' => 'csa', 'CsaV3_6G051730' => 'csa', 'CsaV3_7G025350' => 'csa', 'CSS0001067' => 'camsi', 'CSS0005996' => 'camsi', 'CSS0006590' => 'camsi', 'CSS0009673' => 'camsi', 'CSS0010201' => 'camsi', 'CSS0010549' => 'camsi', 'CSS0011364' => 'camsi', 'CSS0014473' => 'camsi', 'CSS0014961' => 'camsi', 'CSS0020191' => 'camsi', 'CSS0021165' => 'camsi', 'CSS0022306' => 'camsi', 'CSS0030591' => 'camsi', 'CSS0030696' => 'camsi', 'CSS0032653' => 'camsi', 'CSS0037487' => 'camsi', 'CSS0041102' => 'camsi', 'CSS0041261' => 'camsi', 'CSS0046246' => 'camsi', 'CSS0049256' => 'camsi', 'DCAR_004075' => 'dca', 'DCAR_011538' => 'dca', 'DCAR_019553' => 'dca', 'DCAR_020952' => 'dca', 'DCAR_021739' => 'dca', 'DCAR_027407' => 'dca', 'DCAR_027913' => 'dca', 'DCAR_028066' => 'dca', 'Dinv05899' => 'din', 'Dinv07563' => 'din', 'Dinv08010' => 'din', 'Dinv14125' => 'din', 'Dinv20172' => 'din', 'Dinv30743' => 'din', 'Dinv31229' => 'din', 'Dinv34162' => 'din', 'Dinv36028' => 'din', 'Dinv39368' => 'din', 'Dinv40565' => 'din', 'Dinv41706' => 'din', 'Duzib052G0089' => 'dzi', 'Duzib116G0641' => 'dzi', 'Duzib132G0069' => 'dzi', 'Duzib132G1219' => 'dzi', 'Duzib147G0278' => 'dzi', 'Duzib160G0480' => 'dzi', 'Duzib170G0661' => 'dzi', 'Duzib177G0591' => 'dzi', 'Duzib187G1353' => 'dzi', 'Duzib192G0858' => 'dzi', 'Duzib192G0883' => 'dzi', 'Duzib213G0506' => 'dzi', 'Duzib235G0289' => 'dzi', 'Duzib251G0422' => 'dzi', 'ECA232G3898' => 'eca', 'ECA233G5950' => 'eca', 'ECA234G1699' => 'eca', 'ECA234G2421' => 'eca', 'ECA236G0426' => 'eca', 'ECA236G4331' => 'eca', 'ECA248G2573' => 'eca', 'EL10Ac1g00077' => 'bvu', 'EL10Ac1g01746' => 'bvu', 'EL10Ac2g03464' => 'bvu', 'EL10Ac4g08176' => 'bvu', 'EL10Ac7g17521' => 'bvu', 'EL10Ac8g20386' => 'bvu', 'EL10Ac9g21343' => 'bvu', 'EL10Ac9g22688' => 'bvu', 'Eucgr.B03434' => 'egr', 'Eucgr.D00618' => 'egr', 'Eucgr.E02395' => 'egr', 'Eucgr.F01129' => 'egr', 'Eucgr.F02622' => 'egr', 'Eucgr.F04207' => 'egr', 'FAN01G0570' => 'fan', 'FAN03G3351' => 'fan', 'FAN06G3702' => 'fan', 'FAN07G2149' => 'fan', 'FAN10G3758' => 'fan', 'FAN11G1170' => 'fan', 'FAN11G2050' => 'fan', 'FAN11G2724' => 'fan', 'FAN12G1700' => 'fan', 'FAN12G2028' => 'fan', 'FAN15G1160' => 'fan', 'FAN15G3063' => 'fan', 'FAN16G2540' => 'fan', 'FAN16G3077' => 'fan', 'FAN16G3624' => 'fan', 'FAN17G0221' => 'fan', 'FAN20G2492' => 'fan', 'FAN20G2905' => 'fan', 'FAN21G0548' => 'fan', 'FAN21G1300' => 'fan', 'FAN22G0077' => 'fan', 'FAN22G1315' => 'fan', 'FAN24G1280' => 'fan', 'FAN24G1445' => 'fan', 'FAN24G3527' => 'fan', 'FAN25G0464' => 'fan', 'FAN25G2885' => 'fan', 'FAN25G3270' => 'fan', 'FAN27G1101' => 'fan', 'FAN27G2846' => 'fan', 'FAN27G3524' => 'fan', 'FvH4_2g11770' => 'fve', 'FvH4_2g15630' => 'fve', 'FvH4_3g05570' => 'fve', 'FvH4_3g09110' => 'fve', 'FvH4_3g19940' => 'fve', 'FvH4_4g04821' => 'fve', 'FvH4_4g31480' => 'fve', 'FvH4_7g01740' => 'fve', 'Glyma.05G130400' => 'gma', 'Glyma.05G156400' => 'gma', 'Glyma.07G197000' => 'gma', 'Glyma.08G085151' => 'gma', 'Glyma.08G114500' => 'gma', 'Glyma.08G300400' => 'gma', 'Glyma.10G215800' => 'gma', 'Glyma.12G224400' => 'gma', 'Glyma.13G179300' => 'gma', 'Glyma.13G218151' => 'gma', 'Glyma.13G238800' => 'gma', 'Glyma.13G276900' => 'gma', 'Glyma.14G078200' => 'gma', 'Glyma.15G074500' => 'gma', 'Glyma.15G094100' => 'gma', 'Glyma.17G247200' => 'gma', 'Glyma.18G120100' => 'gma', 'Glyma.20G176000' => 'gma', 'Gohir.A01G063600' => 'ghi', 'Gohir.A01G170301' => 'ghi', 'Gohir.A02G060500' => 'ghi', 'Gohir.A05G133850' => 'ghi', 'Gohir.A05G161400' => 'ghi', 'Gohir.A06G012900' => 'ghi', 'Gohir.A06G035901' => 'ghi', 'Gohir.A06G127100' => 'ghi', 'Gohir.A06G210500' => 'ghi', 'Gohir.A08G008650' => 'ghi', 'Gohir.A09G072700' => 'ghi', 'Gohir.A09G088301' => 'ghi', 'Gohir.A10G040600' => 'ghi', 'Gohir.A12G036300' => 'ghi', 'Gohir.A12G143350' => 'ghi', 'Gohir.A12G165500' => 'ghi', 'Gohir.A13G145700' => 'ghi', 'Gohir.D01G050000' => 'ghi', 'Gohir.D01G051366' => 'ghi', 'Gohir.D01G161350' => 'ghi', 'Gohir.D02G065900' => 'ghi', 'Gohir.D05G164200' => 'ghi', 'Gohir.D05G355500' => 'ghi', 'Gohir.D06G010400' => 'ghi', 'Gohir.D06G111250' => 'ghi', 'Gohir.D06G132000' => 'ghi', 'Gohir.D06G210500' => 'ghi', 'Gohir.D07G165675' => 'ghi', 'Gohir.D08G062240' => 'ghi', 'Gohir.D08G086101' => 'ghi', 'Gohir.D08G138060' => 'ghi', 'Gohir.D09G072300' => 'ghi', 'Gohir.D10G041400' => 'ghi', 'Gohir.D11G191020' => 'ghi', 'Gohir.D11G212066' => 'ghi', 'Gohir.D12G036300' => 'ghi', 'Gohir.D12G168600' => 'ghi', 'Gohir.D13G150600' => 'ghi', 'Gorai.001G057300' => 'gra', 'Gorai.002G069900' => 'gra', 'Gorai.002G200000' => 'gra', 'Gorai.003G067600' => 'gra', 'Gorai.005G074800' => 'gra', 'Gorai.006G087300' => 'gra', 'Gorai.008G037500' => 'gra', 'Gorai.008G181400' => 'gra', 'Gorai.009G169400' => 'gra', 'Gorai.009G387900' => 'gra', 'Gorai.010G013300' => 'gra', 'Gorai.010G153800' => 'gra', 'Gorai.010G255800' => 'gra', 'Gorai.011G043700' => 'gra', 'Gorai.011G198900' => 'gra', 'Gorai.013G168400' => 'gra', 'GSVIVG01005212001' => 'vvi', 'GSVIVG01006163001' => 'vvi', 'GSVIVG01009625001' => 'vvi', 'GSVIVG01014338001' => 'vvi', 'GSVIVG01020005001' => 'vvi', 'GSVIVG01021450001' => 'vvi', 'GSVIVG01023975001' => 'vvi', 'GSVIVG01034490001' => 'vvi', 'HanXRQChr04g0112071' => 'han', 'HanXRQChr05g0131151' => 'han', 'HanXRQChr09g0262371' => 'han', 'HanXRQChr09g0268401' => 'han', 'HanXRQChr10g0279241' => 'han', 'HanXRQChr10g0297961' => 'han', 'HanXRQChr11g0326231' => 'han', 'HanXRQChr11g0328471' => 'han', 'HanXRQChr16g0507941' => 'han', 'HanXRQChr17g0560211' => 'han', 'Haze_02108' => 'cav', 'Haze_02428' => 'cav', 'Haze_05593' => 'cav', 'Haze_06448' => 'cav', 'Haze_09427' => 'cav', 'Haze_12022' => 'cav', 'Haze_17612' => 'cav', 'Haze_17928' => 'cav', 'Hma1.2p1_0032F.1_g019250' => 'hma', 'Hma1.2p1_0163F.1_g072690' => 'hma', 'Hma1.2p1_0265F.1_g106710' => 'hma', 'Hma1.2p1_0286F.1_g113970' => 'hma', 'Hma1.2p1_0363F.1_g136640' => 'hma', 'Hma1.2p1_0584F.1_g183470' => 'hma', 'Hma1.2p1_0885F.1_g232570' => 'hma', 'HPP92_006022' => 'vpl', 'HPP92_007320' => 'vpl', 'HPP92_011521' => 'vpl', 'HPP92_019387' => 'vpl', 'HPP92_024038' => 'vpl', 'Hund05891' => 'sun', 'Hund06450' => 'sun', 'Hund12053' => 'sun', 'Hund16800' => 'sun', 'Hund21222' => 'sun', 'Hund22896' => 'sun', 'Hund23746' => 'sun', 'Hund27083' => 'sun', 'Lalb_Chr02g0141831' => 'lal', 'Lalb_Chr02g0141841' => 'lal', 'Lalb_Chr05g0220411' => 'lal', 'Lalb_Chr06g0162081' => 'lal', 'Lalb_Chr09g0327651' => 'lal', 'Lalb_Chr13g0295051' => 'lal', 'Lalb_Chr15g0086801' => 'lal', 'Lalb_Chr16g0383781' => 'lal', 'Lalb_Chr16g0383791' => 'lal', 'Lalb_Chr18g0055441' => 'lal', 'Lalb_Chr18g0059611' => 'lal', 'Lalb_Chr20g0109661' => 'lal', 'Lalb_Chr20g0109831' => 'lal', 'Lalb_Chr20g0121871' => 'lal', 'Lalb_Chr22g0355361' => 'lal', 'Lalb_Chr25g0286371' => 'lal', 'Lj1A1187G43' => 'lonja', 'Lj1A1205T50' => 'lonja', 'Lj1A800G33' => 'lonja', 'Lj1C1187T7' => 'lonja', 'Lj1C843T11' => 'lonja', 'Lj1g0010940' => 'lja', 'Lj2A288T69' => 'lonja', 'Lj3g0024276' => 'lja', 'Lj4A47T76' => 'lonja', 'Lj4g0005805' => 'lja', 'Lj4g0006097' => 'lja', 'Lj4g0008528' => 'lja', 'Lj4g0024907' => 'lja', 'Lj5g0012472' => 'lja', 'Lj5g0018648' => 'lja', 'Lj6C789G1' => 'lonja', 'Lj6g0004000' => 'lja', 'Lj7A292G67' => 'lonja', 'Lj7A292T64' => 'lonja', 'Lj9A400T58' => 'lonja', 'Lsat_1_v5_gn_1_126181' => 'lsa', 'Lsat_1_v5_gn_4_123041' => 'lsa', 'Lsat_1_v5_gn_4_133620' => 'lsa', 'Lsat_1_v5_gn_4_53221' => 'lsa', 'Lsat_1_v5_gn_4_71961' => 'lsa', 'Lsat_1_v5_gn_7_105241' => 'lsa', 'Lsat_1_v5_gn_7_21361' => 'lsa', 'Lsat_1_v5_gn_7_28860' => 'lsa', 'Lsat_1_v5_gn_7_31260' => 'lsa', 'Lsat_1_v5_gn_8_52801' => 'lsa', 'Manes.02G191400' => 'mes', 'Manes.03G110100' => 'mes', 'Manes.04G071100' => 'mes', 'Manes.05G100500' => 'mes', 'Manes.05G164700' => 'mes', 'Manes.15G087000' => 'mes', 'Manes.15G121500' => 'mes', 'Manes.16G028300' => 'mes', 'Manes.17G046100' => 'mes', 'Manes.17G069800' => 'mes', 'Manes.18G100500' => 'mes', 'Mapoly0002s0109' => 'mpo', 'Mapoly0024s0007' => 'mpo', 'Mapoly0089s0032' => 'mpo', 'MBI04_g42241_MAGBIO' => 'mbi', 'MBI05_g11988_MAGBIO' => 'mbi', 'MBI05_g35452_MAGBIO' => 'mbi', 'MBI07_g30179_MAGBIO' => 'mbi', 'MBI07_g35859_MAGBIO' => 'mbi', 'MBI07_g35860_MAGBIO' => 'mbi', 'MBI07_g37166_MAGBIO' => 'mbi', 'MBI08_g18172_MAGBIO' => 'mbi', 'MBI09_g08441_MAGBIO' => 'mbi', 'MBI13_g01676_MAGBIO' => 'mbi', 'MBI14_g42955_MAGBIO' => 'mbi', 'MBI16_g13161_MAGBIO' => 'mbi', 'MBI17_g27204_MAGBIO' => 'mbi', 'MBI19_g21595_MAGBIO' => 'mbi', 'MD00G1148400' => 'mdo', 'MD02G1301200' => 'mdo', 'MD03G1227800' => 'mdo', 'MD05G1041100' => 'mdo', 'MD05G1124800' => 'mdo', 'MD05G1284000' => 'mdo', 'MD05G1338800' => 'mdo', 'MD05G1338900' => 'mdo', 'MD07G1022800' => 'mdo', 'MD10G1047500' => 'mdo', 'MD10G1127500' => 'mdo', 'MD10G1262300' => 'mdo', 'MD10G1293800' => 'mdo', 'MD16G1074300' => 'mdo', 'Medtr1g021670' => 'mtr', 'Medtr1g096320' => 'mtr', 'Medtr2g013690' => 'mtr', 'Medtr2g019450' => 'mtr', 'Medtr2g085170' => 'mtr', 'Medtr4g088785' => 'mtr', 'Medtr8g055930' => 'mtr', 'Medtr8g085850' => 'mtr', 'MELO3C002605.2' => 'cme', 'MELO3C003891.2' => 'cme', 'MELO3C004012.2' => 'cme', 'MELO3C007134.2' => 'cme', 'MELO3C008118.2' => 'cme', 'MELO3C016700.2' => 'cme', 'MELO3C024127.2' => 'cme', 'MELO3C033361.2' => 'cme', 'MELO3C033362.2' => 'cme', 'Migut.C00430' => 'egut', 'Migut.C01246' => 'egut', 'Migut.E00101' => 'egut', 'Migut.H01486' => 'egut', 'Migut.H01939' => 'egut', 'Migut.K00360' => 'egut', 'Migut.M00910' => 'egut', 'Migut.M01139' => 'egut', 'Migut.N02677' => 'egut', 'MSTRG.13252' => 'ama', 'MSTRG.14701' => 'ama', 'MSTRG.1521' => 'ama', 'MSTRG.15884' => 'ama', 'MSTRG.16242' => 'ama', 'MSTRG.22285' => 'ama', 'MSTRG.22444' => 'ama', 'MSTRG.2349' => 'ama', 'MSTRG.26308' => 'ama', 'MSTRG.28296' => 'ama', 'MSTRG.9895' => 'ama', 'Nitab4.5_0000110g0060' => 'nta', 'Nitab4.5_0000420g0130' => 'nta', 'Nitab4.5_0000422g0030' => 'nta', 'Nitab4.5_0000560g0180' => 'nta', 'Nitab4.5_0000703g0100' => 'nta', 'Nitab4.5_0000786g0200' => 'nta', 'Nitab4.5_0001336g0020' => 'nta', 'Nitab4.5_0001796g0030' => 'nta', 'Nitab4.5_0003348g0060' => 'nta', 'Nitab4.5_0003698g0040' => 'nta', 'Nitab4.5_0003942g0090' => 'nta', 'Nitab4.5_0004775g0070' => 'nta', 'Nitab4.5_0004864g0030' => 'nta', 'Nitab4.5_0005615g0020' => 'nta', 'Nitab4.5_0009288g0030' => 'nta', 'Nitab4.5_0009341g0010' => 'nta', 'Nitab4.5_0009535g0010' => 'nta', 'Nn1g03995' => 'nnu', 'Nn1g04100' => 'nnu', 'Nn1g06530' => 'nnu', 'Nn3g16404' => 'nnu', 'Nn3g17212' => 'nnu', 'Nn3g20776' => 'nnu', 'Nn3g21923' => 'nnu', 'Nn5g27737' => 'nnu', 'Nn5g29461' => 'nnu', 'Nn7g38355' => 'nnu', 'Nn8g39873' => 'nnu', 'Oeu000548.2' => 'oeu', 'Oeu004672.1' => 'oeu', 'Oeu015605.2' => 'oeu', 'Oeu016092.1' => 'oeu', 'Oeu017879.3' => 'oeu', 'Oeu024910.1' => 'oeu', 'Oeu028965.1' => 'oeu', 'Oeu031269.1' => 'oeu', 'Oeu031270.1' => 'oeu', 'Oeu032535.1' => 'oeu', 'Oeu034151.1' => 'oeu', 'Oeu034152.1' => 'oeu', 'Oeu034588.2' => 'oeu', 'Oeu050846.1' => 'oeu', 'Oeu050849.2' => 'oeu', 'Oeu051063.2' => 'oeu', 'Oeu052368.1' => 'oeu', 'Oeu052370.1' => 'oeu', 'Os01g0210400' => 'osa', 'Os01g0304300' => 'osa', 'Os01g0749100' => 'osa', 'Os02g0745800' => 'osa', 'Os03g0769050' => 'osa', 'Os05g0531500' => 'osa', 'Os06g0724300' => 'osa', 'Os11g0198100' => 'osa', 'Peaxi162Scf00069g01425' => 'pax', 'Peaxi162Scf00280g00811' => 'pax', 'Peaxi162Scf00310g00615' => 'pax', 'Peaxi162Scf00362g00542' => 'pax', 'Peaxi162Scf00461g00310' => 'pax', 'Peaxi162Scf00530g00118' => 'pax', 'Peaxi162Scf00541g00057' => 'pax', 'Peaxi162Scf00661g00017' => 'pax', 'Peaxi162Scf00926g00027' => 'pax', 'Peaxi162Scf01064g00263' => 'pax', 'Peaxi162Scf01211g00135' => 'pax', 'PGR004G2336' => 'pgr', 'PGR042G0327' => 'pgr', 'PGR042G1957' => 'pgr', 'PGR042G2003' => 'pgr', 'PGR042G3929' => 'pgr', 'PGR083G1137' => 'pgr', 'PGR083G1364' => 'pgr', 'PGSC0003DMG400003381' => 'stu', 'PGSC0003DMG400003417' => 'stu', 'PGSC0003DMG400008981' => 'stu', 'PGSC0003DMG400012417' => 'stu', 'PGSC0003DMG400012823' => 'stu', 'PGSC0003DMG400016885' => 'stu', 'PGSC0003DMG400022812' => 'stu', 'PGSC0003DMG400029726' => 'stu', 'PGSC0003DMG401009243' => 'stu', 'PGSC0003DMG401031505' => 'stu', 'PGSC0003DMG402031505' => 'stu', 'Phvul.001G017600' => 'pvu', 'Phvul.002G193500' => 'pvu', 'Phvul.002G228900' => 'pvu', 'Phvul.002G236800' => 'pvu', 'Phvul.003G049500' => 'pvu', 'Phvul.005G072000' => 'pvu', 'Phvul.006G164800' => 'pvu', 'Phvul.006G185100' => 'pvu', 'Phvul.007G090000' => 'pvu', 'Potri.001G399800' => 'ptr', 'Potri.002G149900' => 'ptr', 'Potri.004G044100' => 'ptr', 'Potri.004G177600' => 'ptr', 'Potri.009G138000' => 'ptr', 'Potri.010G094000' => 'ptr', 'Potri.011G053000' => 'ptr', 'Potri.011G119300' => 'ptr', 'Potri.013G113700' => 'ptr', 'Potri.018G107800' => 'ptr', 'Potri.019G084100' => 'ptr', 'Pp3c14_23720' => 'ppa', 'Pp3c16_6340' => 'ppa', 'Pp3c23_13420' => 'ppa', 'Pp3c24_2740' => 'ppa', 'Pp3c25_860' => 'ppa', 'Pp3c8_21750' => 'ppa', 'Prupe.1G273000' => 'ppe', 'Prupe.1G273700' => 'ppe', 'Prupe.1G274100' => 'ppe', 'Prupe.2G023300' => 'ppe', 'Prupe.4G048000' => 'ppe', 'Prupe.4G080400' => 'ppe', 'Prupe.4G181200' => 'ppe', 'Prupe.8G056900' => 'ppe', 'Prupe.8G168700' => 'ppe', 'Psat1g189080' => 'psa', 'Psat1g204760' => 'psa', 'Psat4g175560' => 'psa', 'Psat4g177720' => 'psa', 'Psat5g244240' => 'psa', 'Psat6g010720' => 'psa', 'Psat6g187200' => 'psa', 'Psat7g072040' => 'psa', 'PSO017G3501' => 'pso', 'PSO063G2148' => 'pso', 'PSO063G5608' => 'pso', 'PSO210G6392' => 'pso', 'PSO541G2319' => 'pso', 'PSO541G2836' => 'pso', 'PSO541G4012' => 'pso', 'PSO541G6253' => 'pso', 'PSO675G0580' => 'pso', 'PSO675G0856' => 'pso', 'PSO675G5635' => 'pso', 'PSO675G9157' => 'pso', 'PSO832G1660' => 'pso', 'PSO832G1969' => 'pso', 'QL02p007186' => 'qlo', 'QL02p033904' => 'qlo', 'QL03p064391' => 'qlo', 'QL05p040593' => 'qlo', 'QL05p058242' => 'qlo', 'QL08p021825' => 'qlo', 'QL11p004981' => 'qlo', 'RcHm_v2.0_Chr1g0318301' => 'rch', 'RcHm_v2.0_Chr4g0418501' => 'rch', 'RcHm_v2.0_Chr4g0439971' => 'rch', 'RcHm_v2.0_Chr5g0008541' => 'rch', 'RcHm_v2.0_Chr5g0014101' => 'rch', 'RcHm_v2.0_Chr5g0014131' => 'rch', 'RcHm_v2.0_Chr5g0033621' => 'rch', 'RcHm_v2.0_Chr6g0272041' => 'rch', 'RcHm_v2.0_Chr6g0278831' => 'rch', 'Rhsim02G0130400' => 'rsi', 'Rhsim02G0171100' => 'rsi', 'Rhsim05G0053000' => 'rsi', 'Rhsim05G0053100' => 'rsi', 'Rhsim06G0096500' => 'rsi', 'Rhsim06G0096600' => 'rsi', 'Rhsim06G0199100' => 'rsi', 'Rhsim12G0062300' => 'rsi', 'Rhsim12G0062800' => 'rsi', 'Sabra02G0118600' => 'sbr', 'Sabra04G0027300' => 'sbr', 'Sabra04G0119500' => 'sbr', 'Sabra08G0112500' => 'sbr', 'Sabra11G0036800' => 'sbr', 'Sabra11G0103800' => 'sbr', 'Sabra13G0096300' => 'sbr', 'Sabra16G0262300' => 'sbr', 'Sabra18G0091700' => 'sbr', 'Sabra19G0095400' => 'sbr', 'SalBow6G3080' => 'sbo', 'SalBow7G1157' => 'sbo', 'SalBow7G2123' => 'sbo', 'SalBow7G2285' => 'sbo', 'SalBow7G3537' => 'sbo', 'SalBow8G2947' => 'sbo', 'SalBow8G4463' => 'sbo', 'SalBow8G5466' => 'sbo', 'Sc01g0001750' => 'sci', 'Sc02g0006640' => 'sci', 'Sc02g0006670' => 'sci', 'Sc04g0008220' => 'sci', 'Sc05g0006190' => 'sci', 'Sc08g0002760' => 'sci', 'Sc17g0006170' => 'sci', 'Sc22g0002050' => 'sci', 'Sc23g0001190' => 'sci', 'Sc24g0000980' => 'sci', 'Sed0006245' => 'sed', 'Sed0007543' => 'sed', 'Sed0009411' => 'sed', 'Sed0010765' => 'sed', 'Sed0012944' => 'sed', 'Sed0014682' => 'sed', 'Sed0016174' => 'sed', 'Sed0016796' => 'sed', 'Sed0020317' => 'sed', 'Sed0021467' => 'sed', 'SEGI_01316' => 'sgi', 'SEGI_03374' => 'sgi', 'SEGI_16265' => 'sgi', 'SEGI_18569' => 'sgi', 'SEGI_20351' => 'sgi', 'SEGI_26395' => 'sgi', 'SEGI_29469' => 'sgi', 'SEGI_34771' => 'sgi', 'SEGI_36769' => 'sgi', 'SEGI_37139' => 'sgi', 'SGA_v2.0_scaffold100G29687' => 'sas', 'SGA_v2.0_scaffold118G32472' => 'sas', 'SGA_v2.0_scaffold14G07051' => 'sas', 'SGA_v2.0_scaffold183G39845' => 'sas', 'SGA_v2.0_scaffold1G00174' => 'sas', 'SGA_v2.0_scaffold22G09714' => 'sas', 'SGA_v2.0_scaffold333G48992' => 'sas', 'SGA_v2.0_scaffold46G17491' => 'sas', 'SGA_v2.0_scaffold49G18294' => 'sas', 'SGA_v2.0_scaffold63G21658' => 'sas', 'SHI01741' => 'shi', 'SHI05771' => 'shi', 'SHI18077' => 'shi', 'SHI20525' => 'shi', 'SHI20527' => 'shi', 'SHI20528' => 'shi', 'SMO172G0185' => 'smo', 'SMO198G0020' => 'smo', 'SMO351G0006' => 'smo', 'SMO356G0118' => 'smo', 'SMO358G0296' => 'smo', 'SMO367G0079' => 'smo', 'SMO367G1277' => 'smo', 'Solyc01g014220.3' => 'sly', 'Solyc01g111770.2' => 'sly', 'Solyc02g078180.3' => 'sly', 'Solyc03g006430.3' => 'sly', 'Solyc03g006456.1' => 'sly', 'Solyc03g079860.2' => 'sly', 'Solyc04g079770.3' => 'sly', 'Solyc05g007430.4' => 'sly', 'Solyc07g063150.3' => 'sly', 'Solyc08g016620.3' => 'sly', 'Solyc09g057590.3' => 'sly', 'Solyc09g057600.1' => 'sly', 'Solyc10g009050.3' => 'sly', 'Solyc11g017420.2' => 'sly', 'Sopen01g053810' => 'spe', 'Sopen02g023040' => 'spe', 'Sopen03g002440' => 'spe', 'Sopen04g033350' => 'spe', 'Sopen05g003310' => 'spe', 'Sopen07g004050' => 'spe', 'Sopen07g031340' => 'spe', 'Sopen08g006990' => 'spe', 'Sopen10g004830' => 'spe', 'Sopen11g009370' => 'spe', 'Sp1g24450' => 'spa', 'Sp1g29670' => 'spa', 'Sp1g39600' => 'spa', 'Sp2g11080' => 'spa', 'Sp2g13970' => 'spa', 'Sp4g16130' => 'spa', 'Sp6g13080' => 'spa', 'Sp7g37270' => 'spa', 'TAR371G0065' => 'tar', 'TAR376G0340' => 'tar', 'TAR376G0435' => 'tar', 'TAR381G0002' => 'tar', 'TAR381G1236' => 'tar', 'TAR624G0055' => 'tar', 'TAR624G0324' => 'tar', 'TAR624G0696' => 'tar', 'TAR624G0906' => 'tar', 'TAR625G0107' => 'tar', 'TAR626G0015' => 'tar', 'TAR626G1356' => 'tar', 'TAR627G0888' => 'tar', 'TAR628G0399' => 'tar', 'TAR628G1327' => 'tar', 'TAR629G2831' => 'tar', 'TAR629G2874' => 'tar', 'TAR633G1432' => 'tar', 'TAR633G2771' => 'tar', 'THA.LOC104803394' => 'tha', 'THA.LOC104805153' => 'tha', 'THA.LOC104806784' => 'tha', 'THA.LOC104810473' => 'tha', 'THA.LOC104813100' => 'tha', 'THA.LOC104814215' => 'tha', 'THA.LOC104815554' => 'tha', 'THA.LOC104820544' => 'tha', 'THA.LOC104824754' => 'tha', 'THA.LOC104827717' => 'tha', 'Thecc.02G031400' => 'tca', 'Thecc.02G055900' => 'tca', 'Thecc.02G350800' => 'tca', 'Thecc.06G150900' => 'tca', 'Thecc.06G186600' => 'tca', 'Thecc.07G089600' => 'tca', 'Thecc.08G020400' => 'tca', 'Thecc.08G182100' => 'tca', 'Thhalv10000873m.g' => 'esa', 'Thhalv10004185m.g' => 'esa', 'Thhalv10006981m.g' => 'esa', 'Thhalv10007204m.g' => 'esa', 'Thhalv10011374m.g' => 'esa', 'Thhalv10013482m.g' => 'esa', 'Thhalv10017801m.g' => 'esa', 'Thhalv10024983m.g' => 'esa', 'TPR.G12072' => 'tpr', 'TPR.G15769' => 'tpr', 'TPR.G16504' => 'tpr', 'TPR.G16506' => 'tpr', 'TPR.G24345' => 'tpr', 'TPR.G26666' => 'tpr', 'TPR.G27320' => 'tpr', 'TPR.G31819' => 'tpr', 'TPR.G38879' => 'tpr', 'TPR.G39015' => 'tpr', 'TPR.G8819' => 'tpr', 'TWI09G0924' => 'twi', 'TWI12G0811' => 'twi', 'TWI12G1294' => 'twi', 'TWI31G0150' => 'twi', 'TWI36G1262' => 'twi', 'TWI38G1287' => 'twi', 'TWI38G1633' => 'twi', 'TWI38G1982' => 'twi', 'TWI39G0116' => 'twi', 'TWI60G1011' => 'twi', 'TWI63G0171' => 'twi', 'TWI73G0839' => 'twi', 'TWI79G1511' => 'twi', 'unitig_0.g915' => 'ugi', 'unitig_0.g916' => 'ugi', 'unitig_21.g20219' => 'ugi', 'unitig_21.g20416' => 'ugi', 'unitig_578.g16132' => 'ugi', 'unitig_578.g16718' => 'ugi', 'unitig_62.g23481' => 'ugi', 'unitig_744.g24535' => 'ugi', 'unitig_749.g13525' => 'ugi', 'vmacro01248' => 'vma', 'vmacro02290' => 'vma', 'vmacro10946' => 'vma', 'vmacro11865' => 'vma', 'vmacro12493' => 'vma', 'vmacro17322' => 'vma', 'vmacro21599' => 'vma', 'vmacro23041' => 'vma', 'VMungo0251G0004' => 'vmu', 'VMungo0251G2639' => 'vmu', 'VMungo0251G2967' => 'vmu', 'VMungo0540G0864' => 'vmu', 'VMungo0540G1569' => 'vmu', 'VMungo0647G0317' => 'vmu', 'VMungo0720G1373' => 'vmu', 'VMungo0720G1508' => 'vmu', 'VMungo1080G0485' => 'vmu', 'VMungo1215G3177' => 'vmu', 'Zm00001eb112600' => 'zma', 'Zm00001eb120220' => 'zma', 'Zm00001eb153240' => 'zma', 'Zm00001eb168880' => 'zma', 'Zm00001eb213920' => 'zma', 'Zm00001eb228280' => 'zma', 'Zm00001eb254580' => 'zma', 'Zm00001eb272180' => 'zma', 'Zm00001eb293190' => 'zma', 'Zm00001eb322930' => 'zma', 'Zm00001eb353360' => 'zma', 'Zm00001eb353390' => 'zma', 'Zm00001eb353430' => 'zma', 'Zm00001eb353440' => 'zma', 'Zm00001eb353780' => 'zma' ), 'gf_id' => 'HOM05D000499', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000499' ), 'data_identifier' => 'HOM05D000499', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000499', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1066', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p29780' => 'bna', 'A02p33180' => 'bna', 'A03p16470' => 'bna', 'A03p66010' => 'bna', 'A04p25970' => 'bna', 'A06p01270' => 'bna', 'A06p46080' => 'bna', 'A07p11400' => 'bna', 'A08p01840' => 'bna', 'A08p08230' => 'bna', 'A08p25740' => 'bna', 'A09p32070' => 'bna', 'A09p37830' => 'bna', 'A09p42840' => 'bna', 'A09p42850' => 'bna', 'Aa31LG10G2060' => 'aar', 'Aa31LG2G7410' => 'aar', 'Aa31LG6G10200' => 'aar', 'Aa31LG6G16680' => 'aar', 'Aa31LG6G8470' => 'aar', 'Aa31LG9G12730' => 'aar', 'Aa31LG9G13680' => 'aar', 'Aa31LG9G14920' => 'aar', 'Aa31LG9G6650' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4977' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5467' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3254' => 'aag', 'Actinidia02578' => 'ach', 'Actinidia07693' => 'ach', 'Actinidia08413' => 'ach', 'Actinidia08414' => 'ach', 'Actinidia15289' => 'ach', 'Actinidia19871' => 'ach', 'Actinidia21475' => 'ach', 'Actinidia22576' => 'ach', 'Actinidia28327' => 'ach', 'Actinidia32491' => 'ach', 'Actinidia39463' => 'ach', 'Actinidia39571' => 'ach', 'Ah.01g013750' => 'amhyb', 'Ah.01g023210' => 'amhyb', 'Ah.04g164850' => 'amhyb', 'Ah.05g178060' => 'amhyb', 'Ah.07g204270' => 'amhyb', 'Ah.07g208480' => 'amhyb', 'Ah.09g237410' => 'amhyb', 'Ah.14g089460' => 'amhyb', 'AL1G41790' => 'aly', 'AL1G49050' => 'aly', 'AL1G53810' => 'aly', 'AL1G61400' => 'aly', 'AL4G18580' => 'aly', 'AL5G12510' => 'aly', 'AL5G12540' => 'aly', 'AL6G43230' => 'aly', 'AL7G10370' => 'aly', 'AL7G19250' => 'aly', 'AL8G12240' => 'aly', 'AL8G18540' => 'aly', 'Aqoxy1G02409' => 'aox', 'Aqoxy2G03993' => 'aox', 'Aqoxy3G03357' => 'aox', 'Aqoxy4G00785' => 'aox', 'Aqoxy5G02598' => 'aox', 'Aqoxy6G00132' => 'aox', 'Aqoxy7G01776' => 'aox', 'Aqoxy7G02316' => 'aox', 'Aqoxy7G03973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.12AFKW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B8730' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27IQR1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3F75VG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3RE0GA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41TCQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.527VTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FIR39' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5W8UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DA38EV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ63HS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H1I32C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HC27T5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4M8AP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7N3CZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9UVDZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LS1NQA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT1D4B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SKC4TM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCFV76' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF9Q1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQWD9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1ZM88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WE07RT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YCK7VH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJE6Q6' => 'arhy', 'AT1G28240' => 'ath', 'AT1G34550' => 'ath', 'AT1G53040' => 'ath', 'AT2G02910' => 'ath', 'AT4G09630' => 'ath', 'AT4G38500' => 'ath', 'AT5G42660' => 'ath', 'AT5G46220' => 'ath', 'ATR0152G026' => 'atr', 'ATR0564G343' => 'atr', 'ATR0706G151' => 'atr', 'ATR0733G207' => 'atr', 'ATR0751G234' => 'atr', 'ATR0807G048' => 'atr', 'ATR1091G084' => 'atr', 'Atru.chr10.1229' => 'acertr', 'Atru.chr10.1230' => 'acertr', 'Atru.chr10.1874' => 'acertr', 'Atru.chr11.1808' => 'acertr', 'Atru.chr13.1795' => 'acertr', 'Atru.chr13.570' => 'acertr', 'Atru.chr2.2608' => 'acertr', 'Atru.chr2.2609' => 'acertr', 'Atru.chr5.3428' => 'acertr', 'Atru.chr8.1171' => 'acertr', 'AUR62004651' => 'cqu', 'AUR62008675' => 'cqu', 'AUR62010014' => 'cqu', 'AUR62013004' => 'cqu', 'AUR62014825' => 'cqu', 'AUR62015015' => 'cqu', 'AUR62015151' => 'cqu', 'AUR62017020' => 'cqu', 'AUR62019422' => 'cqu', 'AUR62023570' => 'cqu', 'AUR62025571' => 'cqu', 'AUR62029098' => 'cqu', 'AUR62033863' => 'cqu', 'AUR62034296' => 'cqu', 'AUR62040075' => 'cqu', 'BcaB02g07334' => 'bca', 'BcaB02g10575' => 'bca', 'BcaB03g12119' => 'bca', 'BcaB03g12120' => 'bca', 'BcaB03g13945' => 'bca', 'BcaB04g17123' => 'bca', 'BcaB04g17867' => 'bca', 'BcaB04g19839' => 'bca', 'BcaB07g30317' => 'bca', 'BcaB07g32432' => 'bca', 'BcaB07g33362' => 'bca', 'BcaB08g36611' => 'bca', 'BcaC01g00028' => 'bca', 'BcaC01g01356' => 'bca', 'BcaC01g02034' => 'bca', 'BcaC01g06051' => 'bca', 'BcaC03g16839' => 'bca', 'BcaC03g17176' => 'bca', 'BcaC05g26829' => 'bca', 'BcaC06g31490' => 'bca', 'BcaC06g35344' => 'bca', 'BcaC06g36570' => 'bca', 'BcaC07g37537' => 'bca', 'BcaC08g43491' => 'bca', 'BcaC08g43773' => 'bca', 'BcaNung00234' => 'bca', 'BcaNung01982' => 'bca', 'BcaNung03707' => 'bca', 'BcaNung06454' => 'bca', 'BolC2t10762H' => 'bol', 'BolC2t11191H' => 'bol', 'BolC3t14322H' => 'bol', 'BolC3t19747H' => 'bol', 'BolC3t21425H' => 'bol', 'BolC4t27800H' => 'bol', 'BolC5t31423H' => 'bol', 'BolC6t35951H' => 'bol', 'BolC6t36282H' => 'bol', 'BolC7t40678H' => 'bol', 'BolC7t40679H' => 'bol', 'BolC7t42222H' => 'bol', 'BolC7t43492H' => 'bol', 'BolC7t46785H' => 'bol', 'BolC8t47853H' => 'bol', 'BolC9t56805H' => 'bol', 'BraA02t08000Z' => 'bra', 'BraA02t08341Z' => 'bra', 'BraA03t10936Z' => 'bra', 'BraA03t15657Z' => 'bra', 'BraA04t18100Z' => 'bra', 'BraA05t20523Z' => 'bra', 'BraA06t23353Z' => 'bra', 'BraA06t27473Z' => 'bra', 'BraA06t27769Z' => 'bra', 'BraA07t28928Z' => 'bra', 'BraA08t32236Z' => 'bra', 'BraA08t32841Z' => 'bra', 'BraA08t34524Z' => 'bra', 'BraA09t38742Z' => 'bra', 'BraA09t39295Z' => 'bra', 'C02p47180' => 'bna', 'C02p50990' => 'bna', 'C03p19360' => 'bna', 'C03p74950' => 'bna', 'C03p91000' => 'bna', 'C04p63260' => 'bna', 'C05p27050' => 'bna', 'C06p08750' => 'bna', 'C06p11490' => 'bna', 'C07p02820' => 'bna', 'C07p17180' => 'bna', 'C07p29440' => 'bna', 'C07p63730' => 'bna', 'C09p39260' => 'bna', 'CAN.G1164.34' => 'can', 'CAN.G1164.39' => 'can', 'CAN.G1530.3' => 'can', 'CAN.G162.61' => 'can', 'CAN.G176.6' => 'can', 'CAN.G289.49' => 'can', 'CAN.G370.21' => 'can', 'CAN.G370.22' => 'can', 'CAN.G371.117' => 'can', 'CAN.G58.37' => 'can', 'CAN.G588.98' => 'can', 'CANSAT21G2266' => 'cansat', 'CANSAT25G2799' => 'cansat', 'CANSAT35G0862' => 'cansat', 'CANSAT35G1704' => 'cansat', 'CANSAT35G1760' => 'cansat', 'CANSAT56G3971' => 'cansat', 'CANSAT56G4116' => 'cansat', 'CANSAT80G1259' => 'cansat', 'CARHR027730' => 'chi', 'CARHR033880' => 'chi', 'CARHR043270' => 'chi', 'CARHR145330' => 'chi', 'CARHR145340' => 'chi', 'CARHR175570' => 'chi', 'CARHR181570' => 'chi', 'CARHR258470' => 'chi', 'CARHR260490' => 'chi', 'CARHR294220' => 'chi', 'Carub.0001s2668' => 'cru', 'Carub.0001s3257' => 'cru', 'Carub.0001s4220' => 'cru', 'Carub.0005s0179' => 'cru', 'Carub.0006s2807' => 'cru', 'Carub.0007s0039' => 'cru', 'Carub.0008s0169' => 'cru', 'Carub.0008s0636' => 'cru', 'Ca_00338_v3' => 'car', 'Ca_00542_v3' => 'car', 'Ca_01844_v3' => 'car', 'Ca_10611_v3' => 'car', 'Ca_13326_v3' => 'car', 'Ca_17944_v3' => 'car', 'Ca_18546_v3' => 'car', 'Ca_24219_v3' => 'car', 'Ca_29972_v3' => 'car', 'CBR_g3681' => 'cbr', 'CBR_g40021' => 'cbr', 'Cc01_g08140' => 'ccan', 'Cc02_g13410' => 'ccan', 'Cc02_g37480' => 'ccan', 'Cc05_g12030' => 'ccan', 'Cc09_g03370' => 'ccan', 'Cc09_g10300' => 'ccan', 'Cc10_g03530' => 'ccan', 'Cc10_g11380' => 'ccan', 'CDE01G0176' => 'cde', 'CDE02G0675' => 'cde', 'CDE02G0942' => 'cde', 'CDE02G1153' => 'cde', 'CDE02G4177' => 'cde', 'CDE04G2117' => 'cde', 'CDE04G2736' => 'cde', 'CDE08G1161' => 'cde', 'CDE09G1238' => 'cde', 'Cfa000467' => 'cfa', 'Cfa000947' => 'cfa', 'Cfa004969' => 'cfa', 'Cfa005284' => 'cfa', 'Cfa008993' => 'cfa', 'Cfa018187' => 'cfa', 'Cfa018454' => 'cfa', 'Cfa020585' => 'cfa', 'Ciclev10000424m.g' => 'ccl', 'Ciclev10003605m.g' => 'ccl', 'Ciclev10007828m.g' => 'ccl', 'Ciclev10014620m.g' => 'ccl', 'Ciclev10015169m.g' => 'ccl', 'Ciclev10018291m.g' => 'ccl', 'Ciclev10028256m.g' => 'ccl', 'Ciclev10033822m.g' => 'ccl', 'CiPaw.05G060300' => 'cil', 'CiPaw.05G085000' => 'cil', 'CiPaw.06G083700' => 'cil', 'CiPaw.06G120300' => 'cil', 'CiPaw.09G060500' => 'cil', 'CiPaw.09G123800' => 'cil', 'CiPaw.11G169700' => 'cil', 'CiPaw.12G118300' => 'cil', 'CiPaw.15G071000' => 'cil', 'CiPaw.15G081900' => 'cil', 'ClCG01G024610' => 'cla', 'ClCG03G006070' => 'cla', 'ClCG05G019250' => 'cla', 'ClCG09G009500' => 'cla', 'ClCG11G008200' => 'cla', 'ClCG11G018080' => 'cla', 'COL.COLO4_17373' => 'col', 'COL.COLO4_22994' => 'col', 'COL.COLO4_26389' => 'col', 'COL.COLO4_27170' => 'col', 'COL.COLO4_31074' => 'col', 'COL.COLO4_31465' => 'col', 'COL.COLO4_36438' => 'col', 'COL.COLO4_36439' => 'col', 'Cpa.g.c38781' => 'cpa', 'Cpa.g.sc128.12' => 'cpa', 'Cpa.g.sc166.7' => 'cpa', 'Cpa.g.sc166.8' => 'cpa', 'Cpa.g.sc20.111' => 'cpa', 'Cpa.g.sc27.31' => 'cpa', 'Cpa.g.sc64.36' => 'cpa', 'Cpa.g.sc64.37' => 'cpa', 'Cpa.g.sc66.49' => 'cpa', 'Cpa.g.sc80.64' => 'cpa', 'CsaV3_1G012320' => 'csa', 'CsaV3_2G008480' => 'csa', 'CsaV3_2G033450' => 'csa', 'CsaV3_3G044830' => 'csa', 'CsaV3_4G033710' => 'csa', 'CsaV3_6G051730' => 'csa', 'CsaV3_7G025350' => 'csa', 'CSS0001067' => 'camsi', 'CSS0005996' => 'camsi', 'CSS0006590' => 'camsi', 'CSS0009673' => 'camsi', 'CSS0010201' => 'camsi', 'CSS0010549' => 'camsi', 'CSS0011364' => 'camsi', 'CSS0014473' => 'camsi', 'CSS0014961' => 'camsi', 'CSS0020191' => 'camsi', 'CSS0021165' => 'camsi', 'CSS0022306' => 'camsi', 'CSS0030591' => 'camsi', 'CSS0030696' => 'camsi', 'CSS0032653' => 'camsi', 'CSS0037487' => 'camsi', 'CSS0041102' => 'camsi', 'CSS0041261' => 'camsi', 'CSS0046246' => 'camsi', 'CSS0049256' => 'camsi', 'DCAR_004075' => 'dca', 'DCAR_011538' => 'dca', 'DCAR_019553' => 'dca', 'DCAR_020952' => 'dca', 'DCAR_021739' => 'dca', 'DCAR_027407' => 'dca', 'DCAR_027913' => 'dca', 'DCAR_028066' => 'dca', 'Dinv05899' => 'din', 'Dinv07563' => 'din', 'Dinv08010' => 'din', 'Dinv14125' => 'din', 'Dinv20172' => 'din', 'Dinv30743' => 'din', 'Dinv31229' => 'din', 'Dinv34162' => 'din', 'Dinv36028' => 'din', 'Dinv39368' => 'din', 'Dinv40565' => 'din', 'Dinv41706' => 'din', 'Duzib052G0089' => 'dzi', 'Duzib116G0641' => 'dzi', 'Duzib132G0069' => 'dzi', 'Duzib132G1219' => 'dzi', 'Duzib147G0278' => 'dzi', 'Duzib160G0480' => 'dzi', 'Duzib170G0661' => 'dzi', 'Duzib177G0591' => 'dzi', 'Duzib187G1353' => 'dzi', 'Duzib192G0858' => 'dzi', 'Duzib192G0883' => 'dzi', 'Duzib213G0506' => 'dzi', 'Duzib235G0289' => 'dzi', 'Duzib251G0422' => 'dzi', 'ECA232G3898' => 'eca', 'ECA233G5950' => 'eca', 'ECA234G1699' => 'eca', 'ECA234G2421' => 'eca', 'ECA236G0426' => 'eca', 'ECA236G4331' => 'eca', 'ECA248G2573' => 'eca', 'EL10Ac1g00077' => 'bvu', 'EL10Ac1g01746' => 'bvu', 'EL10Ac2g03464' => 'bvu', 'EL10Ac4g08176' => 'bvu', 'EL10Ac7g17521' => 'bvu', 'EL10Ac8g20386' => 'bvu', 'EL10Ac9g21343' => 'bvu', 'EL10Ac9g22688' => 'bvu', 'Eucgr.B03434' => 'egr', 'Eucgr.D00618' => 'egr', 'Eucgr.E02395' => 'egr', 'Eucgr.F01129' => 'egr', 'Eucgr.F02622' => 'egr', 'Eucgr.F04207' => 'egr', 'FAN01G0570' => 'fan', 'FAN03G3351' => 'fan', 'FAN06G3702' => 'fan', 'FAN07G2149' => 'fan', 'FAN10G3758' => 'fan', 'FAN11G1170' => 'fan', 'FAN11G2050' => 'fan', 'FAN11G2724' => 'fan', 'FAN12G1700' => 'fan', 'FAN12G2028' => 'fan', 'FAN15G1160' => 'fan', 'FAN15G3063' => 'fan', 'FAN16G2540' => 'fan', 'FAN16G3077' => 'fan', 'FAN16G3624' => 'fan', 'FAN17G0221' => 'fan', 'FAN20G2492' => 'fan', 'FAN20G2905' => 'fan', 'FAN21G0548' => 'fan', 'FAN21G1300' => 'fan', 'FAN22G0077' => 'fan', 'FAN22G1315' => 'fan', 'FAN24G1280' => 'fan', 'FAN24G1445' => 'fan', 'FAN24G3527' => 'fan', 'FAN25G0464' => 'fan', 'FAN25G2885' => 'fan', 'FAN25G3270' => 'fan', 'FAN27G1101' => 'fan', 'FAN27G2846' => 'fan', 'FAN27G3524' => 'fan', 'FvH4_2g11770' => 'fve', 'FvH4_2g15630' => 'fve', 'FvH4_3g05570' => 'fve', 'FvH4_3g09110' => 'fve', 'FvH4_3g19940' => 'fve', 'FvH4_4g04821' => 'fve', 'FvH4_4g31480' => 'fve', 'FvH4_7g01740' => 'fve', 'Glyma.05G130400' => 'gma', 'Glyma.05G156400' => 'gma', 'Glyma.07G197000' => 'gma', 'Glyma.08G085151' => 'gma', 'Glyma.08G114500' => 'gma', 'Glyma.08G300400' => 'gma', 'Glyma.10G215800' => 'gma', 'Glyma.12G224400' => 'gma', 'Glyma.13G179300' => 'gma', 'Glyma.13G218151' => 'gma', 'Glyma.13G238800' => 'gma', 'Glyma.13G276900' => 'gma', 'Glyma.14G078200' => 'gma', 'Glyma.15G074500' => 'gma', 'Glyma.15G094100' => 'gma', 'Glyma.17G247200' => 'gma', 'Glyma.18G120100' => 'gma', 'Glyma.20G176000' => 'gma', 'Gohir.A01G063600' => 'ghi', 'Gohir.A01G170301' => 'ghi', 'Gohir.A02G060500' => 'ghi', 'Gohir.A05G133850' => 'ghi', 'Gohir.A05G161400' => 'ghi', 'Gohir.A06G012900' => 'ghi', 'Gohir.A06G035901' => 'ghi', 'Gohir.A06G127100' => 'ghi', 'Gohir.A06G210500' => 'ghi', 'Gohir.A08G008650' => 'ghi', 'Gohir.A09G072700' => 'ghi', 'Gohir.A09G088301' => 'ghi', 'Gohir.A10G040600' => 'ghi', 'Gohir.A12G036300' => 'ghi', 'Gohir.A12G143350' => 'ghi', 'Gohir.A12G165500' => 'ghi', 'Gohir.A13G145700' => 'ghi', 'Gohir.D01G050000' => 'ghi', 'Gohir.D01G051366' => 'ghi', 'Gohir.D01G161350' => 'ghi', 'Gohir.D02G065900' => 'ghi', 'Gohir.D05G164200' => 'ghi', 'Gohir.D05G355500' => 'ghi', 'Gohir.D06G010400' => 'ghi', 'Gohir.D06G111250' => 'ghi', 'Gohir.D06G132000' => 'ghi', 'Gohir.D06G210500' => 'ghi', 'Gohir.D07G165675' => 'ghi', 'Gohir.D08G062240' => 'ghi', 'Gohir.D08G086101' => 'ghi', 'Gohir.D08G138060' => 'ghi', 'Gohir.D09G072300' => 'ghi', 'Gohir.D10G041400' => 'ghi', 'Gohir.D11G191020' => 'ghi', 'Gohir.D11G212066' => 'ghi', 'Gohir.D12G036300' => 'ghi', 'Gohir.D12G168600' => 'ghi', 'Gohir.D13G150600' => 'ghi', 'Gorai.001G057300' => 'gra', 'Gorai.002G069900' => 'gra', 'Gorai.002G200000' => 'gra', 'Gorai.003G067600' => 'gra', 'Gorai.005G074800' => 'gra', 'Gorai.006G087300' => 'gra', 'Gorai.008G037500' => 'gra', 'Gorai.008G181400' => 'gra', 'Gorai.009G169400' => 'gra', 'Gorai.009G387900' => 'gra', 'Gorai.010G013300' => 'gra', 'Gorai.010G153800' => 'gra', 'Gorai.010G255800' => 'gra', 'Gorai.011G043700' => 'gra', 'Gorai.011G198900' => 'gra', 'Gorai.013G168400' => 'gra', 'GSVIVG01005212001' => 'vvi', 'GSVIVG01006163001' => 'vvi', 'GSVIVG01009625001' => 'vvi', 'GSVIVG01014338001' => 'vvi', 'GSVIVG01020005001' => 'vvi', 'GSVIVG01021450001' => 'vvi', 'GSVIVG01023975001' => 'vvi', 'GSVIVG01034490001' => 'vvi', 'HanXRQChr04g0112071' => 'han', 'HanXRQChr05g0131151' => 'han', 'HanXRQChr09g0262371' => 'han', 'HanXRQChr09g0268401' => 'han', 'HanXRQChr10g0279241' => 'han', 'HanXRQChr10g0297961' => 'han', 'HanXRQChr11g0326231' => 'han', 'HanXRQChr11g0328471' => 'han', 'HanXRQChr16g0507941' => 'han', 'HanXRQChr17g0560211' => 'han', 'Haze_02108' => 'cav', 'Haze_02428' => 'cav', 'Haze_05593' => 'cav', 'Haze_06448' => 'cav', 'Haze_09427' => 'cav', 'Haze_12022' => 'cav', 'Haze_17612' => 'cav', 'Haze_17928' => 'cav', 'Hma1.2p1_0032F.1_g019250' => 'hma', 'Hma1.2p1_0163F.1_g072690' => 'hma', 'Hma1.2p1_0265F.1_g106710' => 'hma', 'Hma1.2p1_0286F.1_g113970' => 'hma', 'Hma1.2p1_0363F.1_g136640' => 'hma', 'Hma1.2p1_0584F.1_g183470' => 'hma', 'Hma1.2p1_0885F.1_g232570' => 'hma', 'HPP92_006022' => 'vpl', 'HPP92_007320' => 'vpl', 'HPP92_011521' => 'vpl', 'HPP92_019387' => 'vpl', 'HPP92_024038' => 'vpl', 'Hund05891' => 'sun', 'Hund06450' => 'sun', 'Hund12053' => 'sun', 'Hund16800' => 'sun', 'Hund21222' => 'sun', 'Hund22896' => 'sun', 'Hund23746' => 'sun', 'Hund27083' => 'sun', 'Lalb_Chr02g0141831' => 'lal', 'Lalb_Chr02g0141841' => 'lal', 'Lalb_Chr05g0220411' => 'lal', 'Lalb_Chr06g0162081' => 'lal', 'Lalb_Chr09g0327651' => 'lal', 'Lalb_Chr13g0295051' => 'lal', 'Lalb_Chr15g0086801' => 'lal', 'Lalb_Chr16g0383781' => 'lal', 'Lalb_Chr16g0383791' => 'lal', 'Lalb_Chr18g0055441' => 'lal', 'Lalb_Chr18g0059611' => 'lal', 'Lalb_Chr20g0109661' => 'lal', 'Lalb_Chr20g0109831' => 'lal', 'Lalb_Chr20g0121871' => 'lal', 'Lalb_Chr22g0355361' => 'lal', 'Lalb_Chr25g0286371' => 'lal', 'Lj1A1187G43' => 'lonja', 'Lj1A1205T50' => 'lonja', 'Lj1A800G33' => 'lonja', 'Lj1C1187T7' => 'lonja', 'Lj1C843T11' => 'lonja', 'Lj1g0010940' => 'lja', 'Lj2A288T69' => 'lonja', 'Lj3g0024276' => 'lja', 'Lj4A47T76' => 'lonja', 'Lj4g0005805' => 'lja', 'Lj4g0006097' => 'lja', 'Lj4g0008528' => 'lja', 'Lj4g0024907' => 'lja', 'Lj5g0012472' => 'lja', 'Lj5g0018648' => 'lja', 'Lj6C789G1' => 'lonja', 'Lj6g0004000' => 'lja', 'Lj7A292G67' => 'lonja', 'Lj7A292T64' => 'lonja', 'Lj9A400T58' => 'lonja', 'Lsat_1_v5_gn_1_126181' => 'lsa', 'Lsat_1_v5_gn_4_123041' => 'lsa', 'Lsat_1_v5_gn_4_133620' => 'lsa', 'Lsat_1_v5_gn_4_53221' => 'lsa', 'Lsat_1_v5_gn_4_71961' => 'lsa', 'Lsat_1_v5_gn_7_105241' => 'lsa', 'Lsat_1_v5_gn_7_21361' => 'lsa', 'Lsat_1_v5_gn_7_28860' => 'lsa', 'Lsat_1_v5_gn_7_31260' => 'lsa', 'Lsat_1_v5_gn_8_52801' => 'lsa', 'Manes.02G191400' => 'mes', 'Manes.03G110100' => 'mes', 'Manes.04G071100' => 'mes', 'Manes.05G100500' => 'mes', 'Manes.05G164700' => 'mes', 'Manes.15G087000' => 'mes', 'Manes.15G121500' => 'mes', 'Manes.16G028300' => 'mes', 'Manes.17G046100' => 'mes', 'Manes.17G069800' => 'mes', 'Manes.18G100500' => 'mes', 'Mapoly0002s0109' => 'mpo', 'Mapoly0024s0007' => 'mpo', 'Mapoly0089s0032' => 'mpo', 'MBI04_g42241_MAGBIO' => 'mbi', 'MBI05_g11988_MAGBIO' => 'mbi', 'MBI05_g35452_MAGBIO' => 'mbi', 'MBI07_g30179_MAGBIO' => 'mbi', 'MBI07_g35859_MAGBIO' => 'mbi', 'MBI07_g35860_MAGBIO' => 'mbi', 'MBI07_g37166_MAGBIO' => 'mbi', 'MBI08_g18172_MAGBIO' => 'mbi', 'MBI09_g08441_MAGBIO' => 'mbi', 'MBI13_g01676_MAGBIO' => 'mbi', 'MBI14_g42955_MAGBIO' => 'mbi', 'MBI16_g13161_MAGBIO' => 'mbi', 'MBI17_g27204_MAGBIO' => 'mbi', 'MBI19_g21595_MAGBIO' => 'mbi', 'MD00G1148400' => 'mdo', 'MD02G1301200' => 'mdo', 'MD03G1227800' => 'mdo', 'MD05G1041100' => 'mdo', 'MD05G1124800' => 'mdo', 'MD05G1284000' => 'mdo', 'MD05G1338800' => 'mdo', 'MD05G1338900' => 'mdo', 'MD07G1022800' => 'mdo', 'MD10G1047500' => 'mdo', 'MD10G1127500' => 'mdo', 'MD10G1262300' => 'mdo', 'MD10G1293800' => 'mdo', 'MD16G1074300' => 'mdo', 'Medtr1g021670' => 'mtr', 'Medtr1g096320' => 'mtr', 'Medtr2g013690' => 'mtr', 'Medtr2g019450' => 'mtr', 'Medtr2g085170' => 'mtr', 'Medtr4g088785' => 'mtr', 'Medtr8g055930' => 'mtr', 'Medtr8g085850' => 'mtr', 'MELO3C002605.2' => 'cme', 'MELO3C003891.2' => 'cme', 'MELO3C004012.2' => 'cme', 'MELO3C007134.2' => 'cme', 'MELO3C008118.2' => 'cme', 'MELO3C016700.2' => 'cme', 'MELO3C024127.2' => 'cme', 'MELO3C033361.2' => 'cme', 'MELO3C033362.2' => 'cme', 'Migut.C00430' => 'egut', 'Migut.C01246' => 'egut', 'Migut.E00101' => 'egut', 'Migut.H01486' => 'egut', 'Migut.H01939' => 'egut', 'Migut.K00360' => 'egut', 'Migut.M00910' => 'egut', 'Migut.M01139' => 'egut', 'Migut.N02677' => 'egut', 'MSTRG.13252' => 'ama', 'MSTRG.14701' => 'ama', 'MSTRG.1521' => 'ama', 'MSTRG.15884' => 'ama', 'MSTRG.16242' => 'ama', 'MSTRG.22285' => 'ama', 'MSTRG.22444' => 'ama', 'MSTRG.2349' => 'ama', 'MSTRG.26308' => 'ama', 'MSTRG.28296' => 'ama', 'MSTRG.9895' => 'ama', 'Nitab4.5_0000110g0060' => 'nta', 'Nitab4.5_0000420g0130' => 'nta', 'Nitab4.5_0000422g0030' => 'nta', 'Nitab4.5_0000560g0180' => 'nta', 'Nitab4.5_0000703g0100' => 'nta', 'Nitab4.5_0000786g0200' => 'nta', 'Nitab4.5_0001336g0020' => 'nta', 'Nitab4.5_0001796g0030' => 'nta', 'Nitab4.5_0003348g0060' => 'nta', 'Nitab4.5_0003698g0040' => 'nta', 'Nitab4.5_0003942g0090' => 'nta', 'Nitab4.5_0004775g0070' => 'nta', 'Nitab4.5_0004864g0030' => 'nta', 'Nitab4.5_0005615g0020' => 'nta', 'Nitab4.5_0009288g0030' => 'nta', 'Nitab4.5_0009341g0010' => 'nta', 'Nitab4.5_0009535g0010' => 'nta', 'Nn1g03995' => 'nnu', 'Nn1g04100' => 'nnu', 'Nn1g06530' => 'nnu', 'Nn3g16404' => 'nnu', 'Nn3g17212' => 'nnu', 'Nn3g20776' => 'nnu', 'Nn3g21923' => 'nnu', 'Nn5g27737' => 'nnu', 'Nn5g29461' => 'nnu', 'Nn7g38355' => 'nnu', 'Nn8g39873' => 'nnu', 'Oeu000548.2' => 'oeu', 'Oeu004672.1' => 'oeu', 'Oeu015605.2' => 'oeu', 'Oeu016092.1' => 'oeu', 'Oeu017879.3' => 'oeu', 'Oeu024910.1' => 'oeu', 'Oeu028965.1' => 'oeu', 'Oeu031269.1' => 'oeu', 'Oeu031270.1' => 'oeu', 'Oeu032535.1' => 'oeu', 'Oeu034151.1' => 'oeu', 'Oeu034152.1' => 'oeu', 'Oeu034588.2' => 'oeu', 'Oeu050846.1' => 'oeu', 'Oeu050849.2' => 'oeu', 'Oeu051063.2' => 'oeu', 'Oeu052368.1' => 'oeu', 'Oeu052370.1' => 'oeu', 'Os01g0210400' => 'osa', 'Os01g0304300' => 'osa', 'Os01g0749100' => 'osa', 'Os02g0745800' => 'osa', 'Os03g0769050' => 'osa', 'Os05g0531500' => 'osa', 'Os06g0724300' => 'osa', 'Os11g0198100' => 'osa', 'Peaxi162Scf00069g01425' => 'pax', 'Peaxi162Scf00280g00811' => 'pax', 'Peaxi162Scf00310g00615' => 'pax', 'Peaxi162Scf00362g00542' => 'pax', 'Peaxi162Scf00461g00310' => 'pax', 'Peaxi162Scf00530g00118' => 'pax', 'Peaxi162Scf00541g00057' => 'pax', 'Peaxi162Scf00661g00017' => 'pax', 'Peaxi162Scf00926g00027' => 'pax', 'Peaxi162Scf01064g00263' => 'pax', 'Peaxi162Scf01211g00135' => 'pax', 'PGR004G2336' => 'pgr', 'PGR042G0327' => 'pgr', 'PGR042G1957' => 'pgr', 'PGR042G2003' => 'pgr', 'PGR042G3929' => 'pgr', 'PGR083G1137' => 'pgr', 'PGR083G1364' => 'pgr', 'PGSC0003DMG400003381' => 'stu', 'PGSC0003DMG400003417' => 'stu', 'PGSC0003DMG400008981' => 'stu', 'PGSC0003DMG400012417' => 'stu', 'PGSC0003DMG400012823' => 'stu', 'PGSC0003DMG400016885' => 'stu', 'PGSC0003DMG400022812' => 'stu', 'PGSC0003DMG400029726' => 'stu', 'PGSC0003DMG401009243' => 'stu', 'PGSC0003DMG401031505' => 'stu', 'PGSC0003DMG402031505' => 'stu', 'Phvul.001G017600' => 'pvu', 'Phvul.002G193500' => 'pvu', 'Phvul.002G228900' => 'pvu', 'Phvul.002G236800' => 'pvu', 'Phvul.003G049500' => 'pvu', 'Phvul.005G072000' => 'pvu', 'Phvul.006G164800' => 'pvu', 'Phvul.006G185100' => 'pvu', 'Phvul.007G090000' => 'pvu', 'Potri.001G399800' => 'ptr', 'Potri.002G149900' => 'ptr', 'Potri.004G044100' => 'ptr', 'Potri.004G177600' => 'ptr', 'Potri.009G138000' => 'ptr', 'Potri.010G094000' => 'ptr', 'Potri.011G053000' => 'ptr', 'Potri.011G119300' => 'ptr', 'Potri.013G113700' => 'ptr', 'Potri.018G107800' => 'ptr', 'Potri.019G084100' => 'ptr', 'Pp3c14_23720' => 'ppa', 'Pp3c16_6340' => 'ppa', 'Pp3c23_13420' => 'ppa', 'Pp3c24_2740' => 'ppa', 'Pp3c25_860' => 'ppa', 'Pp3c8_21750' => 'ppa', 'Prupe.1G273000' => 'ppe', 'Prupe.1G273700' => 'ppe', 'Prupe.1G274100' => 'ppe', 'Prupe.2G023300' => 'ppe', 'Prupe.4G048000' => 'ppe', 'Prupe.4G080400' => 'ppe', 'Prupe.4G181200' => 'ppe', 'Prupe.8G056900' => 'ppe', 'Prupe.8G168700' => 'ppe', 'Psat1g189080' => 'psa', 'Psat1g204760' => 'psa', 'Psat4g175560' => 'psa', 'Psat4g177720' => 'psa', 'Psat5g244240' => 'psa', 'Psat6g010720' => 'psa', 'Psat6g187200' => 'psa', 'Psat7g072040' => 'psa', 'PSO017G3501' => 'pso', 'PSO063G2148' => 'pso', 'PSO063G5608' => 'pso', 'PSO210G6392' => 'pso', 'PSO541G2319' => 'pso', 'PSO541G2836' => 'pso', 'PSO541G4012' => 'pso', 'PSO541G6253' => 'pso', 'PSO675G0580' => 'pso', 'PSO675G0856' => 'pso', 'PSO675G5635' => 'pso', 'PSO675G9157' => 'pso', 'PSO832G1660' => 'pso', 'PSO832G1969' => 'pso', 'QL02p007186' => 'qlo', 'QL02p033904' => 'qlo', 'QL03p064391' => 'qlo', 'QL05p040593' => 'qlo', 'QL05p058242' => 'qlo', 'QL08p021825' => 'qlo', 'QL11p004981' => 'qlo', 'RcHm_v2.0_Chr1g0318301' => 'rch', 'RcHm_v2.0_Chr4g0418501' => 'rch', 'RcHm_v2.0_Chr4g0439971' => 'rch', 'RcHm_v2.0_Chr5g0008541' => 'rch', 'RcHm_v2.0_Chr5g0014101' => 'rch', 'RcHm_v2.0_Chr5g0014131' => 'rch', 'RcHm_v2.0_Chr5g0033621' => 'rch', 'RcHm_v2.0_Chr6g0272041' => 'rch', 'RcHm_v2.0_Chr6g0278831' => 'rch', 'Rhsim02G0130400' => 'rsi', 'Rhsim02G0171100' => 'rsi', 'Rhsim05G0053000' => 'rsi', 'Rhsim05G0053100' => 'rsi', 'Rhsim06G0096500' => 'rsi', 'Rhsim06G0096600' => 'rsi', 'Rhsim06G0199100' => 'rsi', 'Rhsim12G0062300' => 'rsi', 'Rhsim12G0062800' => 'rsi', 'Sabra02G0118600' => 'sbr', 'Sabra04G0027300' => 'sbr', 'Sabra04G0119500' => 'sbr', 'Sabra08G0112500' => 'sbr', 'Sabra11G0036800' => 'sbr', 'Sabra11G0103800' => 'sbr', 'Sabra13G0096300' => 'sbr', 'Sabra16G0262300' => 'sbr', 'Sabra18G0091700' => 'sbr', 'Sabra19G0095400' => 'sbr', 'SalBow6G3080' => 'sbo', 'SalBow7G1157' => 'sbo', 'SalBow7G2123' => 'sbo', 'SalBow7G2285' => 'sbo', 'SalBow7G3537' => 'sbo', 'SalBow8G2947' => 'sbo', 'SalBow8G4463' => 'sbo', 'SalBow8G5466' => 'sbo', 'Sc01g0001750' => 'sci', 'Sc02g0006640' => 'sci', 'Sc02g0006670' => 'sci', 'Sc04g0008220' => 'sci', 'Sc05g0006190' => 'sci', 'Sc08g0002760' => 'sci', 'Sc17g0006170' => 'sci', 'Sc22g0002050' => 'sci', 'Sc23g0001190' => 'sci', 'Sc24g0000980' => 'sci', 'Sed0006245' => 'sed', 'Sed0007543' => 'sed', 'Sed0009411' => 'sed', 'Sed0010765' => 'sed', 'Sed0012944' => 'sed', 'Sed0014682' => 'sed', 'Sed0016174' => 'sed', 'Sed0016796' => 'sed', 'Sed0020317' => 'sed', 'Sed0021467' => 'sed', 'SEGI_01316' => 'sgi', 'SEGI_03374' => 'sgi', 'SEGI_16265' => 'sgi', 'SEGI_18569' => 'sgi', 'SEGI_20351' => 'sgi', 'SEGI_26395' => 'sgi', 'SEGI_29469' => 'sgi', 'SEGI_34771' => 'sgi', 'SEGI_36769' => 'sgi', 'SEGI_37139' => 'sgi', 'SGA_v2.0_scaffold100G29687' => 'sas', 'SGA_v2.0_scaffold118G32472' => 'sas', 'SGA_v2.0_scaffold14G07051' => 'sas', 'SGA_v2.0_scaffold183G39845' => 'sas', 'SGA_v2.0_scaffold1G00174' => 'sas', 'SGA_v2.0_scaffold22G09714' => 'sas', 'SGA_v2.0_scaffold333G48992' => 'sas', 'SGA_v2.0_scaffold46G17491' => 'sas', 'SGA_v2.0_scaffold49G18294' => 'sas', 'SGA_v2.0_scaffold63G21658' => 'sas', 'SHI01741' => 'shi', 'SHI05771' => 'shi', 'SHI18077' => 'shi', 'SHI20525' => 'shi', 'SHI20527' => 'shi', 'SHI20528' => 'shi', 'SMO172G0185' => 'smo', 'SMO198G0020' => 'smo', 'SMO351G0006' => 'smo', 'SMO356G0118' => 'smo', 'SMO358G0296' => 'smo', 'SMO367G0079' => 'smo', 'SMO367G1277' => 'smo', 'Solyc01g014220.3' => 'sly', 'Solyc01g111770.2' => 'sly', 'Solyc02g078180.3' => 'sly', 'Solyc03g006430.3' => 'sly', 'Solyc03g006456.1' => 'sly', 'Solyc03g079860.2' => 'sly', 'Solyc04g079770.3' => 'sly', 'Solyc05g007430.4' => 'sly', 'Solyc07g063150.3' => 'sly', 'Solyc08g016620.3' => 'sly', 'Solyc09g057590.3' => 'sly', 'Solyc09g057600.1' => 'sly', 'Solyc10g009050.3' => 'sly', 'Solyc11g017420.2' => 'sly', 'Sopen01g053810' => 'spe', 'Sopen02g023040' => 'spe', 'Sopen03g002440' => 'spe', 'Sopen04g033350' => 'spe', 'Sopen05g003310' => 'spe', 'Sopen07g004050' => 'spe', 'Sopen07g031340' => 'spe', 'Sopen08g006990' => 'spe', 'Sopen10g004830' => 'spe', 'Sopen11g009370' => 'spe', 'Sp1g24450' => 'spa', 'Sp1g29670' => 'spa', 'Sp1g39600' => 'spa', 'Sp2g11080' => 'spa', 'Sp2g13970' => 'spa', 'Sp4g16130' => 'spa', 'Sp6g13080' => 'spa', 'Sp7g37270' => 'spa', 'TAR371G0065' => 'tar', 'TAR376G0340' => 'tar', 'TAR376G0435' => 'tar', 'TAR381G0002' => 'tar', 'TAR381G1236' => 'tar', 'TAR624G0055' => 'tar', 'TAR624G0324' => 'tar', 'TAR624G0696' => 'tar', 'TAR624G0906' => 'tar', 'TAR625G0107' => 'tar', 'TAR626G0015' => 'tar', 'TAR626G1356' => 'tar', 'TAR627G0888' => 'tar', 'TAR628G0399' => 'tar', 'TAR628G1327' => 'tar', 'TAR629G2831' => 'tar', 'TAR629G2874' => 'tar', 'TAR633G1432' => 'tar', 'TAR633G2771' => 'tar', 'THA.LOC104803394' => 'tha', 'THA.LOC104805153' => 'tha', 'THA.LOC104806784' => 'tha', 'THA.LOC104810473' => 'tha', 'THA.LOC104813100' => 'tha', 'THA.LOC104814215' => 'tha', 'THA.LOC104815554' => 'tha', 'THA.LOC104820544' => 'tha', 'THA.LOC104824754' => 'tha', 'THA.LOC104827717' => 'tha', 'Thecc.02G031400' => 'tca', 'Thecc.02G055900' => 'tca', 'Thecc.02G350800' => 'tca', 'Thecc.06G150900' => 'tca', 'Thecc.06G186600' => 'tca', 'Thecc.07G089600' => 'tca', 'Thecc.08G020400' => 'tca', 'Thecc.08G182100' => 'tca', 'Thhalv10000873m.g' => 'esa', 'Thhalv10004185m.g' => 'esa', 'Thhalv10006981m.g' => 'esa', 'Thhalv10007204m.g' => 'esa', 'Thhalv10011374m.g' => 'esa', 'Thhalv10013482m.g' => 'esa', 'Thhalv10017801m.g' => 'esa', 'Thhalv10024983m.g' => 'esa', 'TPR.G12072' => 'tpr', 'TPR.G15769' => 'tpr', 'TPR.G16504' => 'tpr', 'TPR.G16506' => 'tpr', 'TPR.G24345' => 'tpr', 'TPR.G26666' => 'tpr', 'TPR.G27320' => 'tpr', 'TPR.G31819' => 'tpr', 'TPR.G38879' => 'tpr', 'TPR.G39015' => 'tpr', 'TPR.G8819' => 'tpr', 'TWI09G0924' => 'twi', 'TWI12G0811' => 'twi', 'TWI12G1294' => 'twi', 'TWI31G0150' => 'twi', 'TWI36G1262' => 'twi', 'TWI38G1287' => 'twi', 'TWI38G1633' => 'twi', 'TWI38G1982' => 'twi', 'TWI39G0116' => 'twi', 'TWI60G1011' => 'twi', 'TWI63G0171' => 'twi', 'TWI73G0839' => 'twi', 'TWI79G1511' => 'twi', 'unitig_0.g915' => 'ugi', 'unitig_0.g916' => 'ugi', 'unitig_21.g20219' => 'ugi', 'unitig_21.g20416' => 'ugi', 'unitig_578.g16132' => 'ugi', 'unitig_578.g16718' => 'ugi', 'unitig_62.g23481' => 'ugi', 'unitig_744.g24535' => 'ugi', 'unitig_749.g13525' => 'ugi', 'vmacro01248' => 'vma', 'vmacro02290' => 'vma', 'vmacro10946' => 'vma', 'vmacro11865' => 'vma', 'vmacro12493' => 'vma', 'vmacro17322' => 'vma', 'vmacro21599' => 'vma', 'vmacro23041' => 'vma', 'VMungo0251G0004' => 'vmu', 'VMungo0251G2639' => 'vmu', 'VMungo0251G2967' => 'vmu', 'VMungo0540G0864' => 'vmu', 'VMungo0540G1569' => 'vmu', 'VMungo0647G0317' => 'vmu', 'VMungo0720G1373' => 'vmu', 'VMungo0720G1508' => 'vmu', 'VMungo1080G0485' => 'vmu', 'VMungo1215G3177' => 'vmu', 'Zm00001eb112600' => 'zma', 'Zm00001eb120220' => 'zma', 'Zm00001eb153240' => 'zma', 'Zm00001eb168880' => 'zma', 'Zm00001eb213920' => 'zma', 'Zm00001eb228280' => 'zma', 'Zm00001eb254580' => 'zma', 'Zm00001eb272180' => 'zma', 'Zm00001eb293190' => 'zma', 'Zm00001eb322930' => 'zma', 'Zm00001eb353360' => 'zma', 'Zm00001eb353390' => 'zma', 'Zm00001eb353430' => 'zma', 'Zm00001eb353440' => 'zma', 'Zm00001eb353780' => 'zma' ) $gf_id = 'HOM05D000499' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000499' ) $data_identifier = 'HOM05D000499' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 29, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 12, 'amhyb' => (int) 8, 'aly' => (int) 12, 'aox' => (int) 9, 'arhy' => (int) 26, 'ath' => (int) 8, 'atr' => (int) 7, 'acertr' => (int) 10, 'cqu' => (int) 15, 'bca' => (int) 29, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 11, 'cansat' => (int) 8, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 9, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 8, 'cpa' => (int) 10, 'csa' => (int) 7, 'camsi' => (int) 20, 'dca' => (int) 8, 'din' => (int) 12, 'dzi' => (int) 14, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 6, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 38, 'gra' => (int) 16, 'vvi' => (int) 8, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 5, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 11, 'lja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 11, 'mpo' => (int) 3, 'mbi' => (int) 14, 'mdo' => (int) 14, 'mtr' => (int) 8, 'cme' => (int) 9, 'egut' => (int) 9, 'ama' => (int) 11, 'nta' => (int) 17, 'nnu' => (int) 11, 'oeu' => (int) 18, 'osa' => (int) 8, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 6, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 9, 'rsi' => (int) 9, 'sbr' => (int) 10, 'sbo' => (int) 8, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 10, 'sas' => (int) 10, 'shi' => (int) 6, 'smo' => (int) 7, 'sly' => (int) 14, 'spe' => (int) 10, 'spa' => (int) 8, 'tar' => (int) 19, 'tha' => (int) 10, 'tca' => (int) 8, 'esa' => (int) 8, 'tpr' => (int) 11, 'twi' => (int) 13, 'ugi' => (int) 9, 'vma' => (int) 8, 'vmu' => (int) 10, 'zma' => (int) 15 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb353780' $species_info = array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ) $local_species = 'smo' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000499', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1066', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p29780' => 'bna', 'A02p33180' => 'bna', 'A03p16470' => 'bna', 'A03p66010' => 'bna', 'A04p25970' => 'bna', 'A06p01270' => 'bna', 'A06p46080' => 'bna', 'A07p11400' => 'bna', 'A08p01840' => 'bna', 'A08p08230' => 'bna', 'A08p25740' => 'bna', 'A09p32070' => 'bna', 'A09p37830' => 'bna', 'A09p42840' => 'bna', 'A09p42850' => 'bna', 'Aa31LG10G2060' => 'aar', 'Aa31LG2G7410' => 'aar', 'Aa31LG6G10200' => 'aar', 'Aa31LG6G16680' => 'aar', 'Aa31LG6G8470' => 'aar', 'Aa31LG9G12730' => 'aar', 'Aa31LG9G13680' => 'aar', 'Aa31LG9G14920' => 'aar', 'Aa31LG9G6650' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4977' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5467' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3254' => 'aag', 'Actinidia02578' => 'ach', 'Actinidia07693' => 'ach', 'Actinidia08413' => 'ach', 'Actinidia08414' => 'ach', 'Actinidia15289' => 'ach', 'Actinidia19871' => 'ach', 'Actinidia21475' => 'ach', 'Actinidia22576' => 'ach', 'Actinidia28327' => 'ach', 'Actinidia32491' => 'ach', 'Actinidia39463' => 'ach', 'Actinidia39571' => 'ach', 'Ah.01g013750' => 'amhyb', 'Ah.01g023210' => 'amhyb', 'Ah.04g164850' => 'amhyb', 'Ah.05g178060' => 'amhyb', 'Ah.07g204270' => 'amhyb', 'Ah.07g208480' => 'amhyb', 'Ah.09g237410' => 'amhyb', 'Ah.14g089460' => 'amhyb', 'AL1G41790' => 'aly', 'AL1G49050' => 'aly', 'AL1G53810' => 'aly', 'AL1G61400' => 'aly', 'AL4G18580' => 'aly', 'AL5G12510' => 'aly', 'AL5G12540' => 'aly', 'AL6G43230' => 'aly', 'AL7G10370' => 'aly', 'AL7G19250' => 'aly', 'AL8G12240' => 'aly', 'AL8G18540' => 'aly', 'Aqoxy1G02409' => 'aox', 'Aqoxy2G03993' => 'aox', 'Aqoxy3G03357' => 'aox', 'Aqoxy4G00785' => 'aox', 'Aqoxy5G02598' => 'aox', 'Aqoxy6G00132' => 'aox', 'Aqoxy7G01776' => 'aox', 'Aqoxy7G02316' => 'aox', 'Aqoxy7G03973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.12AFKW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B8730' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27IQR1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3F75VG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3RE0GA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41TCQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.527VTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FIR39' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5W8UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DA38EV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ63HS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H1I32C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HC27T5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4M8AP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7N3CZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9UVDZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LS1NQA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT1D4B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SKC4TM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCFV76' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF9Q1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQWD9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1ZM88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WE07RT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YCK7VH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJE6Q6' => 'arhy', 'AT1G28240' => 'ath', 'AT1G34550' => 'ath', 'AT1G53040' => 'ath', 'AT2G02910' => 'ath', 'AT4G09630' => 'ath', 'AT4G38500' => 'ath', 'AT5G42660' => 'ath', 'AT5G46220' => 'ath', 'ATR0152G026' => 'atr', 'ATR0564G343' => 'atr', 'ATR0706G151' => 'atr', 'ATR0733G207' => 'atr', 'ATR0751G234' => 'atr', 'ATR0807G048' => 'atr', 'ATR1091G084' => 'atr', 'Atru.chr10.1229' => 'acertr', 'Atru.chr10.1230' => 'acertr', 'Atru.chr10.1874' => 'acertr', 'Atru.chr11.1808' => 'acertr', 'Atru.chr13.1795' => 'acertr', 'Atru.chr13.570' => 'acertr', 'Atru.chr2.2608' => 'acertr', 'Atru.chr2.2609' => 'acertr', 'Atru.chr5.3428' => 'acertr', 'Atru.chr8.1171' => 'acertr', 'AUR62004651' => 'cqu', 'AUR62008675' => 'cqu', 'AUR62010014' => 'cqu', 'AUR62013004' => 'cqu', 'AUR62014825' => 'cqu', 'AUR62015015' => 'cqu', 'AUR62015151' => 'cqu', 'AUR62017020' => 'cqu', 'AUR62019422' => 'cqu', 'AUR62023570' => 'cqu', 'AUR62025571' => 'cqu', 'AUR62029098' => 'cqu', 'AUR62033863' => 'cqu', 'AUR62034296' => 'cqu', 'AUR62040075' => 'cqu', 'BcaB02g07334' => 'bca', 'BcaB02g10575' => 'bca', 'BcaB03g12119' => 'bca', 'BcaB03g12120' => 'bca', 'BcaB03g13945' => 'bca', 'BcaB04g17123' => 'bca', 'BcaB04g17867' => 'bca', 'BcaB04g19839' => 'bca', 'BcaB07g30317' => 'bca', 'BcaB07g32432' => 'bca', 'BcaB07g33362' => 'bca', 'BcaB08g36611' => 'bca', 'BcaC01g00028' => 'bca', 'BcaC01g01356' => 'bca', 'BcaC01g02034' => 'bca', 'BcaC01g06051' => 'bca', 'BcaC03g16839' => 'bca', 'BcaC03g17176' => 'bca', 'BcaC05g26829' => 'bca', 'BcaC06g31490' => 'bca', 'BcaC06g35344' => 'bca', 'BcaC06g36570' => 'bca', 'BcaC07g37537' => 'bca', 'BcaC08g43491' => 'bca', 'BcaC08g43773' => 'bca', 'BcaNung00234' => 'bca', 'BcaNung01982' => 'bca', 'BcaNung03707' => 'bca', 'BcaNung06454' => 'bca', 'BolC2t10762H' => 'bol', 'BolC2t11191H' => 'bol', 'BolC3t14322H' => 'bol', 'BolC3t19747H' => 'bol', 'BolC3t21425H' => 'bol', 'BolC4t27800H' => 'bol', 'BolC5t31423H' => 'bol', 'BolC6t35951H' => 'bol', 'BolC6t36282H' => 'bol', 'BolC7t40678H' => 'bol', 'BolC7t40679H' => 'bol', 'BolC7t42222H' => 'bol', 'BolC7t43492H' => 'bol', 'BolC7t46785H' => 'bol', 'BolC8t47853H' => 'bol', 'BolC9t56805H' => 'bol', 'BraA02t08000Z' => 'bra', 'BraA02t08341Z' => 'bra', 'BraA03t10936Z' => 'bra', 'BraA03t15657Z' => 'bra', 'BraA04t18100Z' => 'bra', 'BraA05t20523Z' => 'bra', 'BraA06t23353Z' => 'bra', 'BraA06t27473Z' => 'bra', 'BraA06t27769Z' => 'bra', 'BraA07t28928Z' => 'bra', 'BraA08t32236Z' => 'bra', 'BraA08t32841Z' => 'bra', 'BraA08t34524Z' => 'bra', 'BraA09t38742Z' => 'bra', 'BraA09t39295Z' => 'bra', 'C02p47180' => 'bna', 'C02p50990' => 'bna', 'C03p19360' => 'bna', 'C03p74950' => 'bna', 'C03p91000' => 'bna', 'C04p63260' => 'bna', 'C05p27050' => 'bna', 'C06p08750' => 'bna', 'C06p11490' => 'bna', 'C07p02820' => 'bna', 'C07p17180' => 'bna', 'C07p29440' => 'bna', 'C07p63730' => 'bna', 'C09p39260' => 'bna', 'CAN.G1164.34' => 'can', 'CAN.G1164.39' => 'can', 'CAN.G1530.3' => 'can', 'CAN.G162.61' => 'can', 'CAN.G176.6' => 'can', 'CAN.G289.49' => 'can', 'CAN.G370.21' => 'can', 'CAN.G370.22' => 'can', 'CAN.G371.117' => 'can', 'CAN.G58.37' => 'can', 'CAN.G588.98' => 'can', 'CANSAT21G2266' => 'cansat', 'CANSAT25G2799' => 'cansat', 'CANSAT35G0862' => 'cansat', 'CANSAT35G1704' => 'cansat', 'CANSAT35G1760' => 'cansat', 'CANSAT56G3971' => 'cansat', 'CANSAT56G4116' => 'cansat', 'CANSAT80G1259' => 'cansat', 'CARHR027730' => 'chi', 'CARHR033880' => 'chi', 'CARHR043270' => 'chi', 'CARHR145330' => 'chi', 'CARHR145340' => 'chi', 'CARHR175570' => 'chi', 'CARHR181570' => 'chi', 'CARHR258470' => 'chi', 'CARHR260490' => 'chi', 'CARHR294220' => 'chi', 'Carub.0001s2668' => 'cru', 'Carub.0001s3257' => 'cru', 'Carub.0001s4220' => 'cru', 'Carub.0005s0179' => 'cru', 'Carub.0006s2807' => 'cru', 'Carub.0007s0039' => 'cru', 'Carub.0008s0169' => 'cru', 'Carub.0008s0636' => 'cru', 'Ca_00338_v3' => 'car', 'Ca_00542_v3' => 'car', 'Ca_01844_v3' => 'car', 'Ca_10611_v3' => 'car', 'Ca_13326_v3' => 'car', 'Ca_17944_v3' => 'car', 'Ca_18546_v3' => 'car', 'Ca_24219_v3' => 'car', 'Ca_29972_v3' => 'car', 'CBR_g3681' => 'cbr', 'CBR_g40021' => 'cbr', 'Cc01_g08140' => 'ccan', 'Cc02_g13410' => 'ccan', 'Cc02_g37480' => 'ccan', 'Cc05_g12030' => 'ccan', 'Cc09_g03370' => 'ccan', 'Cc09_g10300' => 'ccan', 'Cc10_g03530' => 'ccan', 'Cc10_g11380' => 'ccan', 'CDE01G0176' => 'cde', 'CDE02G0675' => 'cde', 'CDE02G0942' => 'cde', 'CDE02G1153' => 'cde', 'CDE02G4177' => 'cde', 'CDE04G2117' => 'cde', 'CDE04G2736' => 'cde', 'CDE08G1161' => 'cde', 'CDE09G1238' => 'cde', 'Cfa000467' => 'cfa', 'Cfa000947' => 'cfa', 'Cfa004969' => 'cfa', 'Cfa005284' => 'cfa', 'Cfa008993' => 'cfa', 'Cfa018187' => 'cfa', 'Cfa018454' => 'cfa', 'Cfa020585' => 'cfa', 'Ciclev10000424m.g' => 'ccl', 'Ciclev10003605m.g' => 'ccl', 'Ciclev10007828m.g' => 'ccl', 'Ciclev10014620m.g' => 'ccl', 'Ciclev10015169m.g' => 'ccl', 'Ciclev10018291m.g' => 'ccl', 'Ciclev10028256m.g' => 'ccl', 'Ciclev10033822m.g' => 'ccl', 'CiPaw.05G060300' => 'cil', 'CiPaw.05G085000' => 'cil', 'CiPaw.06G083700' => 'cil', 'CiPaw.06G120300' => 'cil', 'CiPaw.09G060500' => 'cil', 'CiPaw.09G123800' => 'cil', 'CiPaw.11G169700' => 'cil', 'CiPaw.12G118300' => 'cil', 'CiPaw.15G071000' => 'cil', 'CiPaw.15G081900' => 'cil', 'ClCG01G024610' => 'cla', 'ClCG03G006070' => 'cla', 'ClCG05G019250' => 'cla', 'ClCG09G009500' => 'cla', 'ClCG11G008200' => 'cla', 'ClCG11G018080' => 'cla', 'COL.COLO4_17373' => 'col', 'COL.COLO4_22994' => 'col', 'COL.COLO4_26389' => 'col', 'COL.COLO4_27170' => 'col', 'COL.COLO4_31074' => 'col', 'COL.COLO4_31465' => 'col', 'COL.COLO4_36438' => 'col', 'COL.COLO4_36439' => 'col', 'Cpa.g.c38781' => 'cpa', 'Cpa.g.sc128.12' => 'cpa', 'Cpa.g.sc166.7' => 'cpa', 'Cpa.g.sc166.8' => 'cpa', 'Cpa.g.sc20.111' => 'cpa', 'Cpa.g.sc27.31' => 'cpa', 'Cpa.g.sc64.36' => 'cpa', 'Cpa.g.sc64.37' => 'cpa', 'Cpa.g.sc66.49' => 'cpa', 'Cpa.g.sc80.64' => 'cpa', 'CsaV3_1G012320' => 'csa', 'CsaV3_2G008480' => 'csa', 'CsaV3_2G033450' => 'csa', 'CsaV3_3G044830' => 'csa', 'CsaV3_4G033710' => 'csa', 'CsaV3_6G051730' => 'csa', 'CsaV3_7G025350' => 'csa', 'CSS0001067' => 'camsi', 'CSS0005996' => 'camsi', 'CSS0006590' => 'camsi', 'CSS0009673' => 'camsi', 'CSS0010201' => 'camsi', 'CSS0010549' => 'camsi', 'CSS0011364' => 'camsi', 'CSS0014473' => 'camsi', 'CSS0014961' => 'camsi', 'CSS0020191' => 'camsi', 'CSS0021165' => 'camsi', 'CSS0022306' => 'camsi', 'CSS0030591' => 'camsi', 'CSS0030696' => 'camsi', 'CSS0032653' => 'camsi', 'CSS0037487' => 'camsi', 'CSS0041102' => 'camsi', 'CSS0041261' => 'camsi', 'CSS0046246' => 'camsi', 'CSS0049256' => 'camsi', 'DCAR_004075' => 'dca', 'DCAR_011538' => 'dca', 'DCAR_019553' => 'dca', 'DCAR_020952' => 'dca', 'DCAR_021739' => 'dca', 'DCAR_027407' => 'dca', 'DCAR_027913' => 'dca', 'DCAR_028066' => 'dca', 'Dinv05899' => 'din', 'Dinv07563' => 'din', 'Dinv08010' => 'din', 'Dinv14125' => 'din', 'Dinv20172' => 'din', 'Dinv30743' => 'din', 'Dinv31229' => 'din', 'Dinv34162' => 'din', 'Dinv36028' => 'din', 'Dinv39368' => 'din', 'Dinv40565' => 'din', 'Dinv41706' => 'din', 'Duzib052G0089' => 'dzi', 'Duzib116G0641' => 'dzi', 'Duzib132G0069' => 'dzi', 'Duzib132G1219' => 'dzi', 'Duzib147G0278' => 'dzi', 'Duzib160G0480' => 'dzi', 'Duzib170G0661' => 'dzi', 'Duzib177G0591' => 'dzi', 'Duzib187G1353' => 'dzi', 'Duzib192G0858' => 'dzi', 'Duzib192G0883' => 'dzi', 'Duzib213G0506' => 'dzi', 'Duzib235G0289' => 'dzi', 'Duzib251G0422' => 'dzi', 'ECA232G3898' => 'eca', 'ECA233G5950' => 'eca', 'ECA234G1699' => 'eca', 'ECA234G2421' => 'eca', 'ECA236G0426' => 'eca', 'ECA236G4331' => 'eca', 'ECA248G2573' => 'eca', 'EL10Ac1g00077' => 'bvu', 'EL10Ac1g01746' => 'bvu', 'EL10Ac2g03464' => 'bvu', 'EL10Ac4g08176' => 'bvu', 'EL10Ac7g17521' => 'bvu', 'EL10Ac8g20386' => 'bvu', 'EL10Ac9g21343' => 'bvu', 'EL10Ac9g22688' => 'bvu', 'Eucgr.B03434' => 'egr', 'Eucgr.D00618' => 'egr', 'Eucgr.E02395' => 'egr', 'Eucgr.F01129' => 'egr', 'Eucgr.F02622' => 'egr', 'Eucgr.F04207' => 'egr', 'FAN01G0570' => 'fan', 'FAN03G3351' => 'fan', 'FAN06G3702' => 'fan', 'FAN07G2149' => 'fan', 'FAN10G3758' => 'fan', 'FAN11G1170' => 'fan', 'FAN11G2050' => 'fan', 'FAN11G2724' => 'fan', 'FAN12G1700' => 'fan', 'FAN12G2028' => 'fan', 'FAN15G1160' => 'fan', 'FAN15G3063' => 'fan', 'FAN16G2540' => 'fan', 'FAN16G3077' => 'fan', 'FAN16G3624' => 'fan', 'FAN17G0221' => 'fan', 'FAN20G2492' => 'fan', 'FAN20G2905' => 'fan', 'FAN21G0548' => 'fan', 'FAN21G1300' => 'fan', 'FAN22G0077' => 'fan', 'FAN22G1315' => 'fan', 'FAN24G1280' => 'fan', 'FAN24G1445' => 'fan', 'FAN24G3527' => 'fan', 'FAN25G0464' => 'fan', 'FAN25G2885' => 'fan', 'FAN25G3270' => 'fan', 'FAN27G1101' => 'fan', 'FAN27G2846' => 'fan', 'FAN27G3524' => 'fan', 'FvH4_2g11770' => 'fve', 'FvH4_2g15630' => 'fve', 'FvH4_3g05570' => 'fve', 'FvH4_3g09110' => 'fve', 'FvH4_3g19940' => 'fve', 'FvH4_4g04821' => 'fve', 'FvH4_4g31480' => 'fve', 'FvH4_7g01740' => 'fve', 'Glyma.05G130400' => 'gma', 'Glyma.05G156400' => 'gma', 'Glyma.07G197000' => 'gma', 'Glyma.08G085151' => 'gma', 'Glyma.08G114500' => 'gma', 'Glyma.08G300400' => 'gma', 'Glyma.10G215800' => 'gma', 'Glyma.12G224400' => 'gma', 'Glyma.13G179300' => 'gma', 'Glyma.13G218151' => 'gma', 'Glyma.13G238800' => 'gma', 'Glyma.13G276900' => 'gma', 'Glyma.14G078200' => 'gma', 'Glyma.15G074500' => 'gma', 'Glyma.15G094100' => 'gma', 'Glyma.17G247200' => 'gma', 'Glyma.18G120100' => 'gma', 'Glyma.20G176000' => 'gma', 'Gohir.A01G063600' => 'ghi', 'Gohir.A01G170301' => 'ghi', 'Gohir.A02G060500' => 'ghi', 'Gohir.A05G133850' => 'ghi', 'Gohir.A05G161400' => 'ghi', 'Gohir.A06G012900' => 'ghi', 'Gohir.A06G035901' => 'ghi', 'Gohir.A06G127100' => 'ghi', 'Gohir.A06G210500' => 'ghi', 'Gohir.A08G008650' => 'ghi', 'Gohir.A09G072700' => 'ghi', 'Gohir.A09G088301' => 'ghi', 'Gohir.A10G040600' => 'ghi', 'Gohir.A12G036300' => 'ghi', 'Gohir.A12G143350' => 'ghi', 'Gohir.A12G165500' => 'ghi', 'Gohir.A13G145700' => 'ghi', 'Gohir.D01G050000' => 'ghi', 'Gohir.D01G051366' => 'ghi', 'Gohir.D01G161350' => 'ghi', 'Gohir.D02G065900' => 'ghi', 'Gohir.D05G164200' => 'ghi', 'Gohir.D05G355500' => 'ghi', 'Gohir.D06G010400' => 'ghi', 'Gohir.D06G111250' => 'ghi', 'Gohir.D06G132000' => 'ghi', 'Gohir.D06G210500' => 'ghi', 'Gohir.D07G165675' => 'ghi', 'Gohir.D08G062240' => 'ghi', 'Gohir.D08G086101' => 'ghi', 'Gohir.D08G138060' => 'ghi', 'Gohir.D09G072300' => 'ghi', 'Gohir.D10G041400' => 'ghi', 'Gohir.D11G191020' => 'ghi', 'Gohir.D11G212066' => 'ghi', 'Gohir.D12G036300' => 'ghi', 'Gohir.D12G168600' => 'ghi', 'Gohir.D13G150600' => 'ghi', 'Gorai.001G057300' => 'gra', 'Gorai.002G069900' => 'gra', 'Gorai.002G200000' => 'gra', 'Gorai.003G067600' => 'gra', 'Gorai.005G074800' => 'gra', 'Gorai.006G087300' => 'gra', 'Gorai.008G037500' => 'gra', 'Gorai.008G181400' => 'gra', 'Gorai.009G169400' => 'gra', 'Gorai.009G387900' => 'gra', 'Gorai.010G013300' => 'gra', 'Gorai.010G153800' => 'gra', 'Gorai.010G255800' => 'gra', 'Gorai.011G043700' => 'gra', 'Gorai.011G198900' => 'gra', 'Gorai.013G168400' => 'gra', 'GSVIVG01005212001' => 'vvi', 'GSVIVG01006163001' => 'vvi', 'GSVIVG01009625001' => 'vvi', 'GSVIVG01014338001' => 'vvi', 'GSVIVG01020005001' => 'vvi', 'GSVIVG01021450001' => 'vvi', 'GSVIVG01023975001' => 'vvi', 'GSVIVG01034490001' => 'vvi', 'HanXRQChr04g0112071' => 'han', 'HanXRQChr05g0131151' => 'han', 'HanXRQChr09g0262371' => 'han', 'HanXRQChr09g0268401' => 'han', 'HanXRQChr10g0279241' => 'han', 'HanXRQChr10g0297961' => 'han', 'HanXRQChr11g0326231' => 'han', 'HanXRQChr11g0328471' => 'han', 'HanXRQChr16g0507941' => 'han', 'HanXRQChr17g0560211' => 'han', 'Haze_02108' => 'cav', 'Haze_02428' => 'cav', 'Haze_05593' => 'cav', 'Haze_06448' => 'cav', 'Haze_09427' => 'cav', 'Haze_12022' => 'cav', 'Haze_17612' => 'cav', 'Haze_17928' => 'cav', 'Hma1.2p1_0032F.1_g019250' => 'hma', 'Hma1.2p1_0163F.1_g072690' => 'hma', 'Hma1.2p1_0265F.1_g106710' => 'hma', 'Hma1.2p1_0286F.1_g113970' => 'hma', 'Hma1.2p1_0363F.1_g136640' => 'hma', 'Hma1.2p1_0584F.1_g183470' => 'hma', 'Hma1.2p1_0885F.1_g232570' => 'hma', 'HPP92_006022' => 'vpl', 'HPP92_007320' => 'vpl', 'HPP92_011521' => 'vpl', 'HPP92_019387' => 'vpl', 'HPP92_024038' => 'vpl', 'Hund05891' => 'sun', 'Hund06450' => 'sun', 'Hund12053' => 'sun', 'Hund16800' => 'sun', 'Hund21222' => 'sun', 'Hund22896' => 'sun', 'Hund23746' => 'sun', 'Hund27083' => 'sun', 'Lalb_Chr02g0141831' => 'lal', 'Lalb_Chr02g0141841' => 'lal', 'Lalb_Chr05g0220411' => 'lal', 'Lalb_Chr06g0162081' => 'lal', 'Lalb_Chr09g0327651' => 'lal', 'Lalb_Chr13g0295051' => 'lal', 'Lalb_Chr15g0086801' => 'lal', 'Lalb_Chr16g0383781' => 'lal', 'Lalb_Chr16g0383791' => 'lal', 'Lalb_Chr18g0055441' => 'lal', 'Lalb_Chr18g0059611' => 'lal', 'Lalb_Chr20g0109661' => 'lal', 'Lalb_Chr20g0109831' => 'lal', 'Lalb_Chr20g0121871' => 'lal', 'Lalb_Chr22g0355361' => 'lal', 'Lalb_Chr25g0286371' => 'lal', 'Lj1A1187G43' => 'lonja', 'Lj1A1205T50' => 'lonja', 'Lj1A800G33' => 'lonja', 'Lj1C1187T7' => 'lonja', 'Lj1C843T11' => 'lonja', 'Lj1g0010940' => 'lja', 'Lj2A288T69' => 'lonja', 'Lj3g0024276' => 'lja', 'Lj4A47T76' => 'lonja', 'Lj4g0005805' => 'lja', 'Lj4g0006097' => 'lja', 'Lj4g0008528' => 'lja', 'Lj4g0024907' => 'lja', 'Lj5g0012472' => 'lja', 'Lj5g0018648' => 'lja', 'Lj6C789G1' => 'lonja', 'Lj6g0004000' => 'lja', 'Lj7A292G67' => 'lonja', 'Lj7A292T64' => 'lonja', 'Lj9A400T58' => 'lonja', 'Lsat_1_v5_gn_1_126181' => 'lsa', 'Lsat_1_v5_gn_4_123041' => 'lsa', 'Lsat_1_v5_gn_4_133620' => 'lsa', 'Lsat_1_v5_gn_4_53221' => 'lsa', 'Lsat_1_v5_gn_4_71961' => 'lsa', 'Lsat_1_v5_gn_7_105241' => 'lsa', 'Lsat_1_v5_gn_7_21361' => 'lsa', 'Lsat_1_v5_gn_7_28860' => 'lsa', 'Lsat_1_v5_gn_7_31260' => 'lsa', 'Lsat_1_v5_gn_8_52801' => 'lsa', 'Manes.02G191400' => 'mes', 'Manes.03G110100' => 'mes', 'Manes.04G071100' => 'mes', 'Manes.05G100500' => 'mes', 'Manes.05G164700' => 'mes', 'Manes.15G087000' => 'mes', 'Manes.15G121500' => 'mes', 'Manes.16G028300' => 'mes', 'Manes.17G046100' => 'mes', 'Manes.17G069800' => 'mes', 'Manes.18G100500' => 'mes', 'Mapoly0002s0109' => 'mpo', 'Mapoly0024s0007' => 'mpo', 'Mapoly0089s0032' => 'mpo', 'MBI04_g42241_MAGBIO' => 'mbi', 'MBI05_g11988_MAGBIO' => 'mbi', 'MBI05_g35452_MAGBIO' => 'mbi', 'MBI07_g30179_MAGBIO' => 'mbi', 'MBI07_g35859_MAGBIO' => 'mbi', 'MBI07_g35860_MAGBIO' => 'mbi', 'MBI07_g37166_MAGBIO' => 'mbi', 'MBI08_g18172_MAGBIO' => 'mbi', 'MBI09_g08441_MAGBIO' => 'mbi', 'MBI13_g01676_MAGBIO' => 'mbi', 'MBI14_g42955_MAGBIO' => 'mbi', 'MBI16_g13161_MAGBIO' => 'mbi', 'MBI17_g27204_MAGBIO' => 'mbi', 'MBI19_g21595_MAGBIO' => 'mbi', 'MD00G1148400' => 'mdo', 'MD02G1301200' => 'mdo', 'MD03G1227800' => 'mdo', 'MD05G1041100' => 'mdo', 'MD05G1124800' => 'mdo', 'MD05G1284000' => 'mdo', 'MD05G1338800' => 'mdo', 'MD05G1338900' => 'mdo', 'MD07G1022800' => 'mdo', 'MD10G1047500' => 'mdo', 'MD10G1127500' => 'mdo', 'MD10G1262300' => 'mdo', 'MD10G1293800' => 'mdo', 'MD16G1074300' => 'mdo', 'Medtr1g021670' => 'mtr', 'Medtr1g096320' => 'mtr', 'Medtr2g013690' => 'mtr', 'Medtr2g019450' => 'mtr', 'Medtr2g085170' => 'mtr', 'Medtr4g088785' => 'mtr', 'Medtr8g055930' => 'mtr', 'Medtr8g085850' => 'mtr', 'MELO3C002605.2' => 'cme', 'MELO3C003891.2' => 'cme', 'MELO3C004012.2' => 'cme', 'MELO3C007134.2' => 'cme', 'MELO3C008118.2' => 'cme', 'MELO3C016700.2' => 'cme', 'MELO3C024127.2' => 'cme', 'MELO3C033361.2' => 'cme', 'MELO3C033362.2' => 'cme', 'Migut.C00430' => 'egut', 'Migut.C01246' => 'egut', 'Migut.E00101' => 'egut', 'Migut.H01486' => 'egut', 'Migut.H01939' => 'egut', 'Migut.K00360' => 'egut', 'Migut.M00910' => 'egut', 'Migut.M01139' => 'egut', 'Migut.N02677' => 'egut', 'MSTRG.13252' => 'ama', 'MSTRG.14701' => 'ama', 'MSTRG.1521' => 'ama', 'MSTRG.15884' => 'ama', 'MSTRG.16242' => 'ama', 'MSTRG.22285' => 'ama', 'MSTRG.22444' => 'ama', 'MSTRG.2349' => 'ama', 'MSTRG.26308' => 'ama', 'MSTRG.28296' => 'ama', 'MSTRG.9895' => 'ama', 'Nitab4.5_0000110g0060' => 'nta', 'Nitab4.5_0000420g0130' => 'nta', 'Nitab4.5_0000422g0030' => 'nta', 'Nitab4.5_0000560g0180' => 'nta', 'Nitab4.5_0000703g0100' => 'nta', 'Nitab4.5_0000786g0200' => 'nta', 'Nitab4.5_0001336g0020' => 'nta', 'Nitab4.5_0001796g0030' => 'nta', 'Nitab4.5_0003348g0060' => 'nta', 'Nitab4.5_0003698g0040' => 'nta', 'Nitab4.5_0003942g0090' => 'nta', 'Nitab4.5_0004775g0070' => 'nta', 'Nitab4.5_0004864g0030' => 'nta', 'Nitab4.5_0005615g0020' => 'nta', 'Nitab4.5_0009288g0030' => 'nta', 'Nitab4.5_0009341g0010' => 'nta', 'Nitab4.5_0009535g0010' => 'nta', 'Nn1g03995' => 'nnu', 'Nn1g04100' => 'nnu', 'Nn1g06530' => 'nnu', 'Nn3g16404' => 'nnu', 'Nn3g17212' => 'nnu', 'Nn3g20776' => 'nnu', 'Nn3g21923' => 'nnu', 'Nn5g27737' => 'nnu', 'Nn5g29461' => 'nnu', 'Nn7g38355' => 'nnu', 'Nn8g39873' => 'nnu', 'Oeu000548.2' => 'oeu', 'Oeu004672.1' => 'oeu', 'Oeu015605.2' => 'oeu', 'Oeu016092.1' => 'oeu', 'Oeu017879.3' => 'oeu', 'Oeu024910.1' => 'oeu', 'Oeu028965.1' => 'oeu', 'Oeu031269.1' => 'oeu', 'Oeu031270.1' => 'oeu', 'Oeu032535.1' => 'oeu', 'Oeu034151.1' => 'oeu', 'Oeu034152.1' => 'oeu', 'Oeu034588.2' => 'oeu', 'Oeu050846.1' => 'oeu', 'Oeu050849.2' => 'oeu', 'Oeu051063.2' => 'oeu', 'Oeu052368.1' => 'oeu', 'Oeu052370.1' => 'oeu', 'Os01g0210400' => 'osa', 'Os01g0304300' => 'osa', 'Os01g0749100' => 'osa', 'Os02g0745800' => 'osa', 'Os03g0769050' => 'osa', 'Os05g0531500' => 'osa', 'Os06g0724300' => 'osa', 'Os11g0198100' => 'osa', 'Peaxi162Scf00069g01425' => 'pax', 'Peaxi162Scf00280g00811' => 'pax', 'Peaxi162Scf00310g00615' => 'pax', 'Peaxi162Scf00362g00542' => 'pax', 'Peaxi162Scf00461g00310' => 'pax', 'Peaxi162Scf00530g00118' => 'pax', 'Peaxi162Scf00541g00057' => 'pax', 'Peaxi162Scf00661g00017' => 'pax', 'Peaxi162Scf00926g00027' => 'pax', 'Peaxi162Scf01064g00263' => 'pax', 'Peaxi162Scf01211g00135' => 'pax', 'PGR004G2336' => 'pgr', 'PGR042G0327' => 'pgr', 'PGR042G1957' => 'pgr', 'PGR042G2003' => 'pgr', 'PGR042G3929' => 'pgr', 'PGR083G1137' => 'pgr', 'PGR083G1364' => 'pgr', 'PGSC0003DMG400003381' => 'stu', 'PGSC0003DMG400003417' => 'stu', 'PGSC0003DMG400008981' => 'stu', 'PGSC0003DMG400012417' => 'stu', 'PGSC0003DMG400012823' => 'stu', 'PGSC0003DMG400016885' => 'stu', 'PGSC0003DMG400022812' => 'stu', 'PGSC0003DMG400029726' => 'stu', 'PGSC0003DMG401009243' => 'stu', 'PGSC0003DMG401031505' => 'stu', 'PGSC0003DMG402031505' => 'stu', 'Phvul.001G017600' => 'pvu', 'Phvul.002G193500' => 'pvu', 'Phvul.002G228900' => 'pvu', 'Phvul.002G236800' => 'pvu', 'Phvul.003G049500' => 'pvu', 'Phvul.005G072000' => 'pvu', 'Phvul.006G164800' => 'pvu', 'Phvul.006G185100' => 'pvu', 'Phvul.007G090000' => 'pvu', 'Potri.001G399800' => 'ptr', 'Potri.002G149900' => 'ptr', 'Potri.004G044100' => 'ptr', 'Potri.004G177600' => 'ptr', 'Potri.009G138000' => 'ptr', 'Potri.010G094000' => 'ptr', 'Potri.011G053000' => 'ptr', 'Potri.011G119300' => 'ptr', 'Potri.013G113700' => 'ptr', 'Potri.018G107800' => 'ptr', 'Potri.019G084100' => 'ptr', 'Pp3c14_23720' => 'ppa', 'Pp3c16_6340' => 'ppa', 'Pp3c23_13420' => 'ppa', 'Pp3c24_2740' => 'ppa', 'Pp3c25_860' => 'ppa', 'Pp3c8_21750' => 'ppa', 'Prupe.1G273000' => 'ppe', 'Prupe.1G273700' => 'ppe', 'Prupe.1G274100' => 'ppe', 'Prupe.2G023300' => 'ppe', 'Prupe.4G048000' => 'ppe', 'Prupe.4G080400' => 'ppe', 'Prupe.4G181200' => 'ppe', 'Prupe.8G056900' => 'ppe', 'Prupe.8G168700' => 'ppe', 'Psat1g189080' => 'psa', 'Psat1g204760' => 'psa', 'Psat4g175560' => 'psa', 'Psat4g177720' => 'psa', 'Psat5g244240' => 'psa', 'Psat6g010720' => 'psa', 'Psat6g187200' => 'psa', 'Psat7g072040' => 'psa', 'PSO017G3501' => 'pso', 'PSO063G2148' => 'pso', 'PSO063G5608' => 'pso', 'PSO210G6392' => 'pso', 'PSO541G2319' => 'pso', 'PSO541G2836' => 'pso', 'PSO541G4012' => 'pso', 'PSO541G6253' => 'pso', 'PSO675G0580' => 'pso', 'PSO675G0856' => 'pso', 'PSO675G5635' => 'pso', 'PSO675G9157' => 'pso', 'PSO832G1660' => 'pso', 'PSO832G1969' => 'pso', 'QL02p007186' => 'qlo', 'QL02p033904' => 'qlo', 'QL03p064391' => 'qlo', 'QL05p040593' => 'qlo', 'QL05p058242' => 'qlo', 'QL08p021825' => 'qlo', 'QL11p004981' => 'qlo', 'RcHm_v2.0_Chr1g0318301' => 'rch', 'RcHm_v2.0_Chr4g0418501' => 'rch', 'RcHm_v2.0_Chr4g0439971' => 'rch', 'RcHm_v2.0_Chr5g0008541' => 'rch', 'RcHm_v2.0_Chr5g0014101' => 'rch', 'RcHm_v2.0_Chr5g0014131' => 'rch', 'RcHm_v2.0_Chr5g0033621' => 'rch', 'RcHm_v2.0_Chr6g0272041' => 'rch', 'RcHm_v2.0_Chr6g0278831' => 'rch', 'Rhsim02G0130400' => 'rsi', 'Rhsim02G0171100' => 'rsi', 'Rhsim05G0053000' => 'rsi', 'Rhsim05G0053100' => 'rsi', 'Rhsim06G0096500' => 'rsi', 'Rhsim06G0096600' => 'rsi', 'Rhsim06G0199100' => 'rsi', 'Rhsim12G0062300' => 'rsi', 'Rhsim12G0062800' => 'rsi', 'Sabra02G0118600' => 'sbr', 'Sabra04G0027300' => 'sbr', 'Sabra04G0119500' => 'sbr', 'Sabra08G0112500' => 'sbr', 'Sabra11G0036800' => 'sbr', 'Sabra11G0103800' => 'sbr', 'Sabra13G0096300' => 'sbr', 'Sabra16G0262300' => 'sbr', 'Sabra18G0091700' => 'sbr', 'Sabra19G0095400' => 'sbr', 'SalBow6G3080' => 'sbo', 'SalBow7G1157' => 'sbo', 'SalBow7G2123' => 'sbo', 'SalBow7G2285' => 'sbo', 'SalBow7G3537' => 'sbo', 'SalBow8G2947' => 'sbo', 'SalBow8G4463' => 'sbo', 'SalBow8G5466' => 'sbo', 'Sc01g0001750' => 'sci', 'Sc02g0006640' => 'sci', 'Sc02g0006670' => 'sci', 'Sc04g0008220' => 'sci', 'Sc05g0006190' => 'sci', 'Sc08g0002760' => 'sci', 'Sc17g0006170' => 'sci', 'Sc22g0002050' => 'sci', 'Sc23g0001190' => 'sci', 'Sc24g0000980' => 'sci', 'Sed0006245' => 'sed', 'Sed0007543' => 'sed', 'Sed0009411' => 'sed', 'Sed0010765' => 'sed', 'Sed0012944' => 'sed', 'Sed0014682' => 'sed', 'Sed0016174' => 'sed', 'Sed0016796' => 'sed', 'Sed0020317' => 'sed', 'Sed0021467' => 'sed', 'SEGI_01316' => 'sgi', 'SEGI_03374' => 'sgi', 'SEGI_16265' => 'sgi', 'SEGI_18569' => 'sgi', 'SEGI_20351' => 'sgi', 'SEGI_26395' => 'sgi', 'SEGI_29469' => 'sgi', 'SEGI_34771' => 'sgi', 'SEGI_36769' => 'sgi', 'SEGI_37139' => 'sgi', 'SGA_v2.0_scaffold100G29687' => 'sas', 'SGA_v2.0_scaffold118G32472' => 'sas', 'SGA_v2.0_scaffold14G07051' => 'sas', 'SGA_v2.0_scaffold183G39845' => 'sas', 'SGA_v2.0_scaffold1G00174' => 'sas', 'SGA_v2.0_scaffold22G09714' => 'sas', 'SGA_v2.0_scaffold333G48992' => 'sas', 'SGA_v2.0_scaffold46G17491' => 'sas', 'SGA_v2.0_scaffold49G18294' => 'sas', 'SGA_v2.0_scaffold63G21658' => 'sas', 'SHI01741' => 'shi', 'SHI05771' => 'shi', 'SHI18077' => 'shi', 'SHI20525' => 'shi', 'SHI20527' => 'shi', 'SHI20528' => 'shi', 'SMO172G0185' => 'smo', 'SMO198G0020' => 'smo', 'SMO351G0006' => 'smo', 'SMO356G0118' => 'smo', 'SMO358G0296' => 'smo', 'SMO367G0079' => 'smo', 'SMO367G1277' => 'smo', 'Solyc01g014220.3' => 'sly', 'Solyc01g111770.2' => 'sly', 'Solyc02g078180.3' => 'sly', 'Solyc03g006430.3' => 'sly', 'Solyc03g006456.1' => 'sly', 'Solyc03g079860.2' => 'sly', 'Solyc04g079770.3' => 'sly', 'Solyc05g007430.4' => 'sly', 'Solyc07g063150.3' => 'sly', 'Solyc08g016620.3' => 'sly', 'Solyc09g057590.3' => 'sly', 'Solyc09g057600.1' => 'sly', 'Solyc10g009050.3' => 'sly', 'Solyc11g017420.2' => 'sly', 'Sopen01g053810' => 'spe', 'Sopen02g023040' => 'spe', 'Sopen03g002440' => 'spe', 'Sopen04g033350' => 'spe', 'Sopen05g003310' => 'spe', 'Sopen07g004050' => 'spe', 'Sopen07g031340' => 'spe', 'Sopen08g006990' => 'spe', 'Sopen10g004830' => 'spe', 'Sopen11g009370' => 'spe', 'Sp1g24450' => 'spa', 'Sp1g29670' => 'spa', 'Sp1g39600' => 'spa', 'Sp2g11080' => 'spa', 'Sp2g13970' => 'spa', 'Sp4g16130' => 'spa', 'Sp6g13080' => 'spa', 'Sp7g37270' => 'spa', 'TAR371G0065' => 'tar', 'TAR376G0340' => 'tar', 'TAR376G0435' => 'tar', 'TAR381G0002' => 'tar', 'TAR381G1236' => 'tar', 'TAR624G0055' => 'tar', 'TAR624G0324' => 'tar', 'TAR624G0696' => 'tar', 'TAR624G0906' => 'tar', 'TAR625G0107' => 'tar', 'TAR626G0015' => 'tar', 'TAR626G1356' => 'tar', 'TAR627G0888' => 'tar', 'TAR628G0399' => 'tar', 'TAR628G1327' => 'tar', 'TAR629G2831' => 'tar', 'TAR629G2874' => 'tar', 'TAR633G1432' => 'tar', 'TAR633G2771' => 'tar', 'THA.LOC104803394' => 'tha', 'THA.LOC104805153' => 'tha', 'THA.LOC104806784' => 'tha', 'THA.LOC104810473' => 'tha', 'THA.LOC104813100' => 'tha', 'THA.LOC104814215' => 'tha', 'THA.LOC104815554' => 'tha', 'THA.LOC104820544' => 'tha', 'THA.LOC104824754' => 'tha', 'THA.LOC104827717' => 'tha', 'Thecc.02G031400' => 'tca', 'Thecc.02G055900' => 'tca', 'Thecc.02G350800' => 'tca', 'Thecc.06G150900' => 'tca', 'Thecc.06G186600' => 'tca', 'Thecc.07G089600' => 'tca', 'Thecc.08G020400' => 'tca', 'Thecc.08G182100' => 'tca', 'Thhalv10000873m.g' => 'esa', 'Thhalv10004185m.g' => 'esa', 'Thhalv10006981m.g' => 'esa', 'Thhalv10007204m.g' => 'esa', 'Thhalv10011374m.g' => 'esa', 'Thhalv10013482m.g' => 'esa', 'Thhalv10017801m.g' => 'esa', 'Thhalv10024983m.g' => 'esa', 'TPR.G12072' => 'tpr', 'TPR.G15769' => 'tpr', 'TPR.G16504' => 'tpr', 'TPR.G16506' => 'tpr', 'TPR.G24345' => 'tpr', 'TPR.G26666' => 'tpr', 'TPR.G27320' => 'tpr', 'TPR.G31819' => 'tpr', 'TPR.G38879' => 'tpr', 'TPR.G39015' => 'tpr', 'TPR.G8819' => 'tpr', 'TWI09G0924' => 'twi', 'TWI12G0811' => 'twi', 'TWI12G1294' => 'twi', 'TWI31G0150' => 'twi', 'TWI36G1262' => 'twi', 'TWI38G1287' => 'twi', 'TWI38G1633' => 'twi', 'TWI38G1982' => 'twi', 'TWI39G0116' => 'twi', 'TWI60G1011' => 'twi', 'TWI63G0171' => 'twi', 'TWI73G0839' => 'twi', 'TWI79G1511' => 'twi', 'unitig_0.g915' => 'ugi', 'unitig_0.g916' => 'ugi', 'unitig_21.g20219' => 'ugi', 'unitig_21.g20416' => 'ugi', 'unitig_578.g16132' => 'ugi', 'unitig_578.g16718' => 'ugi', 'unitig_62.g23481' => 'ugi', 'unitig_744.g24535' => 'ugi', 'unitig_749.g13525' => 'ugi', 'vmacro01248' => 'vma', 'vmacro02290' => 'vma', 'vmacro10946' => 'vma', 'vmacro11865' => 'vma', 'vmacro12493' => 'vma', 'vmacro17322' => 'vma', 'vmacro21599' => 'vma', 'vmacro23041' => 'vma', 'VMungo0251G0004' => 'vmu', 'VMungo0251G2639' => 'vmu', 'VMungo0251G2967' => 'vmu', 'VMungo0540G0864' => 'vmu', 'VMungo0540G1569' => 'vmu', 'VMungo0647G0317' => 'vmu', 'VMungo0720G1373' => 'vmu', 'VMungo0720G1508' => 'vmu', 'VMungo1080G0485' => 'vmu', 'VMungo1215G3177' => 'vmu', 'Zm00001eb112600' => 'zma', 'Zm00001eb120220' => 'zma', 'Zm00001eb153240' => 'zma', 'Zm00001eb168880' => 'zma', 'Zm00001eb213920' => 'zma', 'Zm00001eb228280' => 'zma', 'Zm00001eb254580' => 'zma', 'Zm00001eb272180' => 'zma', 'Zm00001eb293190' => 'zma', 'Zm00001eb322930' => 'zma', 'Zm00001eb353360' => 'zma', 'Zm00001eb353390' => 'zma', 'Zm00001eb353430' => 'zma', 'Zm00001eb353440' => 'zma', 'Zm00001eb353780' => 'zma' ), 'gf_id' => 'HOM05D000499', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000499' ), 'data_identifier' => 'HOM05D000499', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000499', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1066', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p29780' => 'bna', 'A02p33180' => 'bna', 'A03p16470' => 'bna', 'A03p66010' => 'bna', 'A04p25970' => 'bna', 'A06p01270' => 'bna', 'A06p46080' => 'bna', 'A07p11400' => 'bna', 'A08p01840' => 'bna', 'A08p08230' => 'bna', 'A08p25740' => 'bna', 'A09p32070' => 'bna', 'A09p37830' => 'bna', 'A09p42840' => 'bna', 'A09p42850' => 'bna', 'Aa31LG10G2060' => 'aar', 'Aa31LG2G7410' => 'aar', 'Aa31LG6G10200' => 'aar', 'Aa31LG6G16680' => 'aar', 'Aa31LG6G8470' => 'aar', 'Aa31LG9G12730' => 'aar', 'Aa31LG9G13680' => 'aar', 'Aa31LG9G14920' => 'aar', 'Aa31LG9G6650' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4977' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5467' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3254' => 'aag', 'Actinidia02578' => 'ach', 'Actinidia07693' => 'ach', 'Actinidia08413' => 'ach', 'Actinidia08414' => 'ach', 'Actinidia15289' => 'ach', 'Actinidia19871' => 'ach', 'Actinidia21475' => 'ach', 'Actinidia22576' => 'ach', 'Actinidia28327' => 'ach', 'Actinidia32491' => 'ach', 'Actinidia39463' => 'ach', 'Actinidia39571' => 'ach', 'Ah.01g013750' => 'amhyb', 'Ah.01g023210' => 'amhyb', 'Ah.04g164850' => 'amhyb', 'Ah.05g178060' => 'amhyb', 'Ah.07g204270' => 'amhyb', 'Ah.07g208480' => 'amhyb', 'Ah.09g237410' => 'amhyb', 'Ah.14g089460' => 'amhyb', 'AL1G41790' => 'aly', 'AL1G49050' => 'aly', 'AL1G53810' => 'aly', 'AL1G61400' => 'aly', 'AL4G18580' => 'aly', 'AL5G12510' => 'aly', 'AL5G12540' => 'aly', 'AL6G43230' => 'aly', 'AL7G10370' => 'aly', 'AL7G19250' => 'aly', 'AL8G12240' => 'aly', 'AL8G18540' => 'aly', 'Aqoxy1G02409' => 'aox', 'Aqoxy2G03993' => 'aox', 'Aqoxy3G03357' => 'aox', 'Aqoxy4G00785' => 'aox', 'Aqoxy5G02598' => 'aox', 'Aqoxy6G00132' => 'aox', 'Aqoxy7G01776' => 'aox', 'Aqoxy7G02316' => 'aox', 'Aqoxy7G03973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.12AFKW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B8730' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27IQR1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3F75VG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3RE0GA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41TCQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.527VTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FIR39' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5W8UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DA38EV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ63HS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H1I32C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HC27T5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4M8AP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7N3CZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9UVDZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LS1NQA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT1D4B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SKC4TM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCFV76' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF9Q1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQWD9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1ZM88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WE07RT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YCK7VH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJE6Q6' => 'arhy', 'AT1G28240' => 'ath', 'AT1G34550' => 'ath', 'AT1G53040' => 'ath', 'AT2G02910' => 'ath', 'AT4G09630' => 'ath', 'AT4G38500' => 'ath', 'AT5G42660' => 'ath', 'AT5G46220' => 'ath', 'ATR0152G026' => 'atr', 'ATR0564G343' => 'atr', 'ATR0706G151' => 'atr', 'ATR0733G207' => 'atr', 'ATR0751G234' => 'atr', 'ATR0807G048' => 'atr', 'ATR1091G084' => 'atr', 'Atru.chr10.1229' => 'acertr', 'Atru.chr10.1230' => 'acertr', 'Atru.chr10.1874' => 'acertr', 'Atru.chr11.1808' => 'acertr', 'Atru.chr13.1795' => 'acertr', 'Atru.chr13.570' => 'acertr', 'Atru.chr2.2608' => 'acertr', 'Atru.chr2.2609' => 'acertr', 'Atru.chr5.3428' => 'acertr', 'Atru.chr8.1171' => 'acertr', 'AUR62004651' => 'cqu', 'AUR62008675' => 'cqu', 'AUR62010014' => 'cqu', 'AUR62013004' => 'cqu', 'AUR62014825' => 'cqu', 'AUR62015015' => 'cqu', 'AUR62015151' => 'cqu', 'AUR62017020' => 'cqu', 'AUR62019422' => 'cqu', 'AUR62023570' => 'cqu', 'AUR62025571' => 'cqu', 'AUR62029098' => 'cqu', 'AUR62033863' => 'cqu', 'AUR62034296' => 'cqu', 'AUR62040075' => 'cqu', 'BcaB02g07334' => 'bca', 'BcaB02g10575' => 'bca', 'BcaB03g12119' => 'bca', 'BcaB03g12120' => 'bca', 'BcaB03g13945' => 'bca', 'BcaB04g17123' => 'bca', 'BcaB04g17867' => 'bca', 'BcaB04g19839' => 'bca', 'BcaB07g30317' => 'bca', 'BcaB07g32432' => 'bca', 'BcaB07g33362' => 'bca', 'BcaB08g36611' => 'bca', 'BcaC01g00028' => 'bca', 'BcaC01g01356' => 'bca', 'BcaC01g02034' => 'bca', 'BcaC01g06051' => 'bca', 'BcaC03g16839' => 'bca', 'BcaC03g17176' => 'bca', 'BcaC05g26829' => 'bca', 'BcaC06g31490' => 'bca', 'BcaC06g35344' => 'bca', 'BcaC06g36570' => 'bca', 'BcaC07g37537' => 'bca', 'BcaC08g43491' => 'bca', 'BcaC08g43773' => 'bca', 'BcaNung00234' => 'bca', 'BcaNung01982' => 'bca', 'BcaNung03707' => 'bca', 'BcaNung06454' => 'bca', 'BolC2t10762H' => 'bol', 'BolC2t11191H' => 'bol', 'BolC3t14322H' => 'bol', 'BolC3t19747H' => 'bol', 'BolC3t21425H' => 'bol', 'BolC4t27800H' => 'bol', 'BolC5t31423H' => 'bol', 'BolC6t35951H' => 'bol', 'BolC6t36282H' => 'bol', 'BolC7t40678H' => 'bol', 'BolC7t40679H' => 'bol', 'BolC7t42222H' => 'bol', 'BolC7t43492H' => 'bol', 'BolC7t46785H' => 'bol', 'BolC8t47853H' => 'bol', 'BolC9t56805H' => 'bol', 'BraA02t08000Z' => 'bra', 'BraA02t08341Z' => 'bra', 'BraA03t10936Z' => 'bra', 'BraA03t15657Z' => 'bra', 'BraA04t18100Z' => 'bra', 'BraA05t20523Z' => 'bra', 'BraA06t23353Z' => 'bra', 'BraA06t27473Z' => 'bra', 'BraA06t27769Z' => 'bra', 'BraA07t28928Z' => 'bra', 'BraA08t32236Z' => 'bra', 'BraA08t32841Z' => 'bra', 'BraA08t34524Z' => 'bra', 'BraA09t38742Z' => 'bra', 'BraA09t39295Z' => 'bra', 'C02p47180' => 'bna', 'C02p50990' => 'bna', 'C03p19360' => 'bna', 'C03p74950' => 'bna', 'C03p91000' => 'bna', 'C04p63260' => 'bna', 'C05p27050' => 'bna', 'C06p08750' => 'bna', 'C06p11490' => 'bna', 'C07p02820' => 'bna', 'C07p17180' => 'bna', 'C07p29440' => 'bna', 'C07p63730' => 'bna', 'C09p39260' => 'bna', 'CAN.G1164.34' => 'can', 'CAN.G1164.39' => 'can', 'CAN.G1530.3' => 'can', 'CAN.G162.61' => 'can', 'CAN.G176.6' => 'can', 'CAN.G289.49' => 'can', 'CAN.G370.21' => 'can', 'CAN.G370.22' => 'can', 'CAN.G371.117' => 'can', 'CAN.G58.37' => 'can', 'CAN.G588.98' => 'can', 'CANSAT21G2266' => 'cansat', 'CANSAT25G2799' => 'cansat', 'CANSAT35G0862' => 'cansat', 'CANSAT35G1704' => 'cansat', 'CANSAT35G1760' => 'cansat', 'CANSAT56G3971' => 'cansat', 'CANSAT56G4116' => 'cansat', 'CANSAT80G1259' => 'cansat', 'CARHR027730' => 'chi', 'CARHR033880' => 'chi', 'CARHR043270' => 'chi', 'CARHR145330' => 'chi', 'CARHR145340' => 'chi', 'CARHR175570' => 'chi', 'CARHR181570' => 'chi', 'CARHR258470' => 'chi', 'CARHR260490' => 'chi', 'CARHR294220' => 'chi', 'Carub.0001s2668' => 'cru', 'Carub.0001s3257' => 'cru', 'Carub.0001s4220' => 'cru', 'Carub.0005s0179' => 'cru', 'Carub.0006s2807' => 'cru', 'Carub.0007s0039' => 'cru', 'Carub.0008s0169' => 'cru', 'Carub.0008s0636' => 'cru', 'Ca_00338_v3' => 'car', 'Ca_00542_v3' => 'car', 'Ca_01844_v3' => 'car', 'Ca_10611_v3' => 'car', 'Ca_13326_v3' => 'car', 'Ca_17944_v3' => 'car', 'Ca_18546_v3' => 'car', 'Ca_24219_v3' => 'car', 'Ca_29972_v3' => 'car', 'CBR_g3681' => 'cbr', 'CBR_g40021' => 'cbr', 'Cc01_g08140' => 'ccan', 'Cc02_g13410' => 'ccan', 'Cc02_g37480' => 'ccan', 'Cc05_g12030' => 'ccan', 'Cc09_g03370' => 'ccan', 'Cc09_g10300' => 'ccan', 'Cc10_g03530' => 'ccan', 'Cc10_g11380' => 'ccan', 'CDE01G0176' => 'cde', 'CDE02G0675' => 'cde', 'CDE02G0942' => 'cde', 'CDE02G1153' => 'cde', 'CDE02G4177' => 'cde', 'CDE04G2117' => 'cde', 'CDE04G2736' => 'cde', 'CDE08G1161' => 'cde', 'CDE09G1238' => 'cde', 'Cfa000467' => 'cfa', 'Cfa000947' => 'cfa', 'Cfa004969' => 'cfa', 'Cfa005284' => 'cfa', 'Cfa008993' => 'cfa', 'Cfa018187' => 'cfa', 'Cfa018454' => 'cfa', 'Cfa020585' => 'cfa', 'Ciclev10000424m.g' => 'ccl', 'Ciclev10003605m.g' => 'ccl', 'Ciclev10007828m.g' => 'ccl', 'Ciclev10014620m.g' => 'ccl', 'Ciclev10015169m.g' => 'ccl', 'Ciclev10018291m.g' => 'ccl', 'Ciclev10028256m.g' => 'ccl', 'Ciclev10033822m.g' => 'ccl', 'CiPaw.05G060300' => 'cil', 'CiPaw.05G085000' => 'cil', 'CiPaw.06G083700' => 'cil', 'CiPaw.06G120300' => 'cil', 'CiPaw.09G060500' => 'cil', 'CiPaw.09G123800' => 'cil', 'CiPaw.11G169700' => 'cil', 'CiPaw.12G118300' => 'cil', 'CiPaw.15G071000' => 'cil', 'CiPaw.15G081900' => 'cil', 'ClCG01G024610' => 'cla', 'ClCG03G006070' => 'cla', 'ClCG05G019250' => 'cla', 'ClCG09G009500' => 'cla', 'ClCG11G008200' => 'cla', 'ClCG11G018080' => 'cla', 'COL.COLO4_17373' => 'col', 'COL.COLO4_22994' => 'col', 'COL.COLO4_26389' => 'col', 'COL.COLO4_27170' => 'col', 'COL.COLO4_31074' => 'col', 'COL.COLO4_31465' => 'col', 'COL.COLO4_36438' => 'col', 'COL.COLO4_36439' => 'col', 'Cpa.g.c38781' => 'cpa', 'Cpa.g.sc128.12' => 'cpa', 'Cpa.g.sc166.7' => 'cpa', 'Cpa.g.sc166.8' => 'cpa', 'Cpa.g.sc20.111' => 'cpa', 'Cpa.g.sc27.31' => 'cpa', 'Cpa.g.sc64.36' => 'cpa', 'Cpa.g.sc64.37' => 'cpa', 'Cpa.g.sc66.49' => 'cpa', 'Cpa.g.sc80.64' => 'cpa', 'CsaV3_1G012320' => 'csa', 'CsaV3_2G008480' => 'csa', 'CsaV3_2G033450' => 'csa', 'CsaV3_3G044830' => 'csa', 'CsaV3_4G033710' => 'csa', 'CsaV3_6G051730' => 'csa', 'CsaV3_7G025350' => 'csa', 'CSS0001067' => 'camsi', 'CSS0005996' => 'camsi', 'CSS0006590' => 'camsi', 'CSS0009673' => 'camsi', 'CSS0010201' => 'camsi', 'CSS0010549' => 'camsi', 'CSS0011364' => 'camsi', 'CSS0014473' => 'camsi', 'CSS0014961' => 'camsi', 'CSS0020191' => 'camsi', 'CSS0021165' => 'camsi', 'CSS0022306' => 'camsi', 'CSS0030591' => 'camsi', 'CSS0030696' => 'camsi', 'CSS0032653' => 'camsi', 'CSS0037487' => 'camsi', 'CSS0041102' => 'camsi', 'CSS0041261' => 'camsi', 'CSS0046246' => 'camsi', 'CSS0049256' => 'camsi', 'DCAR_004075' => 'dca', 'DCAR_011538' => 'dca', 'DCAR_019553' => 'dca', 'DCAR_020952' => 'dca', 'DCAR_021739' => 'dca', 'DCAR_027407' => 'dca', 'DCAR_027913' => 'dca', 'DCAR_028066' => 'dca', 'Dinv05899' => 'din', 'Dinv07563' => 'din', 'Dinv08010' => 'din', 'Dinv14125' => 'din', 'Dinv20172' => 'din', 'Dinv30743' => 'din', 'Dinv31229' => 'din', 'Dinv34162' => 'din', 'Dinv36028' => 'din', 'Dinv39368' => 'din', 'Dinv40565' => 'din', 'Dinv41706' => 'din', 'Duzib052G0089' => 'dzi', 'Duzib116G0641' => 'dzi', 'Duzib132G0069' => 'dzi', 'Duzib132G1219' => 'dzi', 'Duzib147G0278' => 'dzi', 'Duzib160G0480' => 'dzi', 'Duzib170G0661' => 'dzi', 'Duzib177G0591' => 'dzi', 'Duzib187G1353' => 'dzi', 'Duzib192G0858' => 'dzi', 'Duzib192G0883' => 'dzi', 'Duzib213G0506' => 'dzi', 'Duzib235G0289' => 'dzi', 'Duzib251G0422' => 'dzi', 'ECA232G3898' => 'eca', 'ECA233G5950' => 'eca', 'ECA234G1699' => 'eca', 'ECA234G2421' => 'eca', 'ECA236G0426' => 'eca', 'ECA236G4331' => 'eca', 'ECA248G2573' => 'eca', 'EL10Ac1g00077' => 'bvu', 'EL10Ac1g01746' => 'bvu', 'EL10Ac2g03464' => 'bvu', 'EL10Ac4g08176' => 'bvu', 'EL10Ac7g17521' => 'bvu', 'EL10Ac8g20386' => 'bvu', 'EL10Ac9g21343' => 'bvu', 'EL10Ac9g22688' => 'bvu', 'Eucgr.B03434' => 'egr', 'Eucgr.D00618' => 'egr', 'Eucgr.E02395' => 'egr', 'Eucgr.F01129' => 'egr', 'Eucgr.F02622' => 'egr', 'Eucgr.F04207' => 'egr', 'FAN01G0570' => 'fan', 'FAN03G3351' => 'fan', 'FAN06G3702' => 'fan', 'FAN07G2149' => 'fan', 'FAN10G3758' => 'fan', 'FAN11G1170' => 'fan', 'FAN11G2050' => 'fan', 'FAN11G2724' => 'fan', 'FAN12G1700' => 'fan', 'FAN12G2028' => 'fan', 'FAN15G1160' => 'fan', 'FAN15G3063' => 'fan', 'FAN16G2540' => 'fan', 'FAN16G3077' => 'fan', 'FAN16G3624' => 'fan', 'FAN17G0221' => 'fan', 'FAN20G2492' => 'fan', 'FAN20G2905' => 'fan', 'FAN21G0548' => 'fan', 'FAN21G1300' => 'fan', 'FAN22G0077' => 'fan', 'FAN22G1315' => 'fan', 'FAN24G1280' => 'fan', 'FAN24G1445' => 'fan', 'FAN24G3527' => 'fan', 'FAN25G0464' => 'fan', 'FAN25G2885' => 'fan', 'FAN25G3270' => 'fan', 'FAN27G1101' => 'fan', 'FAN27G2846' => 'fan', 'FAN27G3524' => 'fan', 'FvH4_2g11770' => 'fve', 'FvH4_2g15630' => 'fve', 'FvH4_3g05570' => 'fve', 'FvH4_3g09110' => 'fve', 'FvH4_3g19940' => 'fve', 'FvH4_4g04821' => 'fve', 'FvH4_4g31480' => 'fve', 'FvH4_7g01740' => 'fve', 'Glyma.05G130400' => 'gma', 'Glyma.05G156400' => 'gma', 'Glyma.07G197000' => 'gma', 'Glyma.08G085151' => 'gma', 'Glyma.08G114500' => 'gma', 'Glyma.08G300400' => 'gma', 'Glyma.10G215800' => 'gma', 'Glyma.12G224400' => 'gma', 'Glyma.13G179300' => 'gma', 'Glyma.13G218151' => 'gma', 'Glyma.13G238800' => 'gma', 'Glyma.13G276900' => 'gma', 'Glyma.14G078200' => 'gma', 'Glyma.15G074500' => 'gma', 'Glyma.15G094100' => 'gma', 'Glyma.17G247200' => 'gma', 'Glyma.18G120100' => 'gma', 'Glyma.20G176000' => 'gma', 'Gohir.A01G063600' => 'ghi', 'Gohir.A01G170301' => 'ghi', 'Gohir.A02G060500' => 'ghi', 'Gohir.A05G133850' => 'ghi', 'Gohir.A05G161400' => 'ghi', 'Gohir.A06G012900' => 'ghi', 'Gohir.A06G035901' => 'ghi', 'Gohir.A06G127100' => 'ghi', 'Gohir.A06G210500' => 'ghi', 'Gohir.A08G008650' => 'ghi', 'Gohir.A09G072700' => 'ghi', 'Gohir.A09G088301' => 'ghi', 'Gohir.A10G040600' => 'ghi', 'Gohir.A12G036300' => 'ghi', 'Gohir.A12G143350' => 'ghi', 'Gohir.A12G165500' => 'ghi', 'Gohir.A13G145700' => 'ghi', 'Gohir.D01G050000' => 'ghi', 'Gohir.D01G051366' => 'ghi', 'Gohir.D01G161350' => 'ghi', 'Gohir.D02G065900' => 'ghi', 'Gohir.D05G164200' => 'ghi', 'Gohir.D05G355500' => 'ghi', 'Gohir.D06G010400' => 'ghi', 'Gohir.D06G111250' => 'ghi', 'Gohir.D06G132000' => 'ghi', 'Gohir.D06G210500' => 'ghi', 'Gohir.D07G165675' => 'ghi', 'Gohir.D08G062240' => 'ghi', 'Gohir.D08G086101' => 'ghi', 'Gohir.D08G138060' => 'ghi', 'Gohir.D09G072300' => 'ghi', 'Gohir.D10G041400' => 'ghi', 'Gohir.D11G191020' => 'ghi', 'Gohir.D11G212066' => 'ghi', 'Gohir.D12G036300' => 'ghi', 'Gohir.D12G168600' => 'ghi', 'Gohir.D13G150600' => 'ghi', 'Gorai.001G057300' => 'gra', 'Gorai.002G069900' => 'gra', 'Gorai.002G200000' => 'gra', 'Gorai.003G067600' => 'gra', 'Gorai.005G074800' => 'gra', 'Gorai.006G087300' => 'gra', 'Gorai.008G037500' => 'gra', 'Gorai.008G181400' => 'gra', 'Gorai.009G169400' => 'gra', 'Gorai.009G387900' => 'gra', 'Gorai.010G013300' => 'gra', 'Gorai.010G153800' => 'gra', 'Gorai.010G255800' => 'gra', 'Gorai.011G043700' => 'gra', 'Gorai.011G198900' => 'gra', 'Gorai.013G168400' => 'gra', 'GSVIVG01005212001' => 'vvi', 'GSVIVG01006163001' => 'vvi', 'GSVIVG01009625001' => 'vvi', 'GSVIVG01014338001' => 'vvi', 'GSVIVG01020005001' => 'vvi', 'GSVIVG01021450001' => 'vvi', 'GSVIVG01023975001' => 'vvi', 'GSVIVG01034490001' => 'vvi', 'HanXRQChr04g0112071' => 'han', 'HanXRQChr05g0131151' => 'han', 'HanXRQChr09g0262371' => 'han', 'HanXRQChr09g0268401' => 'han', 'HanXRQChr10g0279241' => 'han', 'HanXRQChr10g0297961' => 'han', 'HanXRQChr11g0326231' => 'han', 'HanXRQChr11g0328471' => 'han', 'HanXRQChr16g0507941' => 'han', 'HanXRQChr17g0560211' => 'han', 'Haze_02108' => 'cav', 'Haze_02428' => 'cav', 'Haze_05593' => 'cav', 'Haze_06448' => 'cav', 'Haze_09427' => 'cav', 'Haze_12022' => 'cav', 'Haze_17612' => 'cav', 'Haze_17928' => 'cav', 'Hma1.2p1_0032F.1_g019250' => 'hma', 'Hma1.2p1_0163F.1_g072690' => 'hma', 'Hma1.2p1_0265F.1_g106710' => 'hma', 'Hma1.2p1_0286F.1_g113970' => 'hma', 'Hma1.2p1_0363F.1_g136640' => 'hma', 'Hma1.2p1_0584F.1_g183470' => 'hma', 'Hma1.2p1_0885F.1_g232570' => 'hma', 'HPP92_006022' => 'vpl', 'HPP92_007320' => 'vpl', 'HPP92_011521' => 'vpl', 'HPP92_019387' => 'vpl', 'HPP92_024038' => 'vpl', 'Hund05891' => 'sun', 'Hund06450' => 'sun', 'Hund12053' => 'sun', 'Hund16800' => 'sun', 'Hund21222' => 'sun', 'Hund22896' => 'sun', 'Hund23746' => 'sun', 'Hund27083' => 'sun', 'Lalb_Chr02g0141831' => 'lal', 'Lalb_Chr02g0141841' => 'lal', 'Lalb_Chr05g0220411' => 'lal', 'Lalb_Chr06g0162081' => 'lal', 'Lalb_Chr09g0327651' => 'lal', 'Lalb_Chr13g0295051' => 'lal', 'Lalb_Chr15g0086801' => 'lal', 'Lalb_Chr16g0383781' => 'lal', 'Lalb_Chr16g0383791' => 'lal', 'Lalb_Chr18g0055441' => 'lal', 'Lalb_Chr18g0059611' => 'lal', 'Lalb_Chr20g0109661' => 'lal', 'Lalb_Chr20g0109831' => 'lal', 'Lalb_Chr20g0121871' => 'lal', 'Lalb_Chr22g0355361' => 'lal', 'Lalb_Chr25g0286371' => 'lal', 'Lj1A1187G43' => 'lonja', 'Lj1A1205T50' => 'lonja', 'Lj1A800G33' => 'lonja', 'Lj1C1187T7' => 'lonja', 'Lj1C843T11' => 'lonja', 'Lj1g0010940' => 'lja', 'Lj2A288T69' => 'lonja', 'Lj3g0024276' => 'lja', 'Lj4A47T76' => 'lonja', 'Lj4g0005805' => 'lja', 'Lj4g0006097' => 'lja', 'Lj4g0008528' => 'lja', 'Lj4g0024907' => 'lja', 'Lj5g0012472' => 'lja', 'Lj5g0018648' => 'lja', 'Lj6C789G1' => 'lonja', 'Lj6g0004000' => 'lja', 'Lj7A292G67' => 'lonja', 'Lj7A292T64' => 'lonja', 'Lj9A400T58' => 'lonja', 'Lsat_1_v5_gn_1_126181' => 'lsa', 'Lsat_1_v5_gn_4_123041' => 'lsa', 'Lsat_1_v5_gn_4_133620' => 'lsa', 'Lsat_1_v5_gn_4_53221' => 'lsa', 'Lsat_1_v5_gn_4_71961' => 'lsa', 'Lsat_1_v5_gn_7_105241' => 'lsa', 'Lsat_1_v5_gn_7_21361' => 'lsa', 'Lsat_1_v5_gn_7_28860' => 'lsa', 'Lsat_1_v5_gn_7_31260' => 'lsa', 'Lsat_1_v5_gn_8_52801' => 'lsa', 'Manes.02G191400' => 'mes', 'Manes.03G110100' => 'mes', 'Manes.04G071100' => 'mes', 'Manes.05G100500' => 'mes', 'Manes.05G164700' => 'mes', 'Manes.15G087000' => 'mes', 'Manes.15G121500' => 'mes', 'Manes.16G028300' => 'mes', 'Manes.17G046100' => 'mes', 'Manes.17G069800' => 'mes', 'Manes.18G100500' => 'mes', 'Mapoly0002s0109' => 'mpo', 'Mapoly0024s0007' => 'mpo', 'Mapoly0089s0032' => 'mpo', 'MBI04_g42241_MAGBIO' => 'mbi', 'MBI05_g11988_MAGBIO' => 'mbi', 'MBI05_g35452_MAGBIO' => 'mbi', 'MBI07_g30179_MAGBIO' => 'mbi', 'MBI07_g35859_MAGBIO' => 'mbi', 'MBI07_g35860_MAGBIO' => 'mbi', 'MBI07_g37166_MAGBIO' => 'mbi', 'MBI08_g18172_MAGBIO' => 'mbi', 'MBI09_g08441_MAGBIO' => 'mbi', 'MBI13_g01676_MAGBIO' => 'mbi', 'MBI14_g42955_MAGBIO' => 'mbi', 'MBI16_g13161_MAGBIO' => 'mbi', 'MBI17_g27204_MAGBIO' => 'mbi', 'MBI19_g21595_MAGBIO' => 'mbi', 'MD00G1148400' => 'mdo', 'MD02G1301200' => 'mdo', 'MD03G1227800' => 'mdo', 'MD05G1041100' => 'mdo', 'MD05G1124800' => 'mdo', 'MD05G1284000' => 'mdo', 'MD05G1338800' => 'mdo', 'MD05G1338900' => 'mdo', 'MD07G1022800' => 'mdo', 'MD10G1047500' => 'mdo', 'MD10G1127500' => 'mdo', 'MD10G1262300' => 'mdo', 'MD10G1293800' => 'mdo', 'MD16G1074300' => 'mdo', 'Medtr1g021670' => 'mtr', 'Medtr1g096320' => 'mtr', 'Medtr2g013690' => 'mtr', 'Medtr2g019450' => 'mtr', 'Medtr2g085170' => 'mtr', 'Medtr4g088785' => 'mtr', 'Medtr8g055930' => 'mtr', 'Medtr8g085850' => 'mtr', 'MELO3C002605.2' => 'cme', 'MELO3C003891.2' => 'cme', 'MELO3C004012.2' => 'cme', 'MELO3C007134.2' => 'cme', 'MELO3C008118.2' => 'cme', 'MELO3C016700.2' => 'cme', 'MELO3C024127.2' => 'cme', 'MELO3C033361.2' => 'cme', 'MELO3C033362.2' => 'cme', 'Migut.C00430' => 'egut', 'Migut.C01246' => 'egut', 'Migut.E00101' => 'egut', 'Migut.H01486' => 'egut', 'Migut.H01939' => 'egut', 'Migut.K00360' => 'egut', 'Migut.M00910' => 'egut', 'Migut.M01139' => 'egut', 'Migut.N02677' => 'egut', 'MSTRG.13252' => 'ama', 'MSTRG.14701' => 'ama', 'MSTRG.1521' => 'ama', 'MSTRG.15884' => 'ama', 'MSTRG.16242' => 'ama', 'MSTRG.22285' => 'ama', 'MSTRG.22444' => 'ama', 'MSTRG.2349' => 'ama', 'MSTRG.26308' => 'ama', 'MSTRG.28296' => 'ama', 'MSTRG.9895' => 'ama', 'Nitab4.5_0000110g0060' => 'nta', 'Nitab4.5_0000420g0130' => 'nta', 'Nitab4.5_0000422g0030' => 'nta', 'Nitab4.5_0000560g0180' => 'nta', 'Nitab4.5_0000703g0100' => 'nta', 'Nitab4.5_0000786g0200' => 'nta', 'Nitab4.5_0001336g0020' => 'nta', 'Nitab4.5_0001796g0030' => 'nta', 'Nitab4.5_0003348g0060' => 'nta', 'Nitab4.5_0003698g0040' => 'nta', 'Nitab4.5_0003942g0090' => 'nta', 'Nitab4.5_0004775g0070' => 'nta', 'Nitab4.5_0004864g0030' => 'nta', 'Nitab4.5_0005615g0020' => 'nta', 'Nitab4.5_0009288g0030' => 'nta', 'Nitab4.5_0009341g0010' => 'nta', 'Nitab4.5_0009535g0010' => 'nta', 'Nn1g03995' => 'nnu', 'Nn1g04100' => 'nnu', 'Nn1g06530' => 'nnu', 'Nn3g16404' => 'nnu', 'Nn3g17212' => 'nnu', 'Nn3g20776' => 'nnu', 'Nn3g21923' => 'nnu', 'Nn5g27737' => 'nnu', 'Nn5g29461' => 'nnu', 'Nn7g38355' => 'nnu', 'Nn8g39873' => 'nnu', 'Oeu000548.2' => 'oeu', 'Oeu004672.1' => 'oeu', 'Oeu015605.2' => 'oeu', 'Oeu016092.1' => 'oeu', 'Oeu017879.3' => 'oeu', 'Oeu024910.1' => 'oeu', 'Oeu028965.1' => 'oeu', 'Oeu031269.1' => 'oeu', 'Oeu031270.1' => 'oeu', 'Oeu032535.1' => 'oeu', 'Oeu034151.1' => 'oeu', 'Oeu034152.1' => 'oeu', 'Oeu034588.2' => 'oeu', 'Oeu050846.1' => 'oeu', 'Oeu050849.2' => 'oeu', 'Oeu051063.2' => 'oeu', 'Oeu052368.1' => 'oeu', 'Oeu052370.1' => 'oeu', 'Os01g0210400' => 'osa', 'Os01g0304300' => 'osa', 'Os01g0749100' => 'osa', 'Os02g0745800' => 'osa', 'Os03g0769050' => 'osa', 'Os05g0531500' => 'osa', 'Os06g0724300' => 'osa', 'Os11g0198100' => 'osa', 'Peaxi162Scf00069g01425' => 'pax', 'Peaxi162Scf00280g00811' => 'pax', 'Peaxi162Scf00310g00615' => 'pax', 'Peaxi162Scf00362g00542' => 'pax', 'Peaxi162Scf00461g00310' => 'pax', 'Peaxi162Scf00530g00118' => 'pax', 'Peaxi162Scf00541g00057' => 'pax', 'Peaxi162Scf00661g00017' => 'pax', 'Peaxi162Scf00926g00027' => 'pax', 'Peaxi162Scf01064g00263' => 'pax', 'Peaxi162Scf01211g00135' => 'pax', 'PGR004G2336' => 'pgr', 'PGR042G0327' => 'pgr', 'PGR042G1957' => 'pgr', 'PGR042G2003' => 'pgr', 'PGR042G3929' => 'pgr', 'PGR083G1137' => 'pgr', 'PGR083G1364' => 'pgr', 'PGSC0003DMG400003381' => 'stu', 'PGSC0003DMG400003417' => 'stu', 'PGSC0003DMG400008981' => 'stu', 'PGSC0003DMG400012417' => 'stu', 'PGSC0003DMG400012823' => 'stu', 'PGSC0003DMG400016885' => 'stu', 'PGSC0003DMG400022812' => 'stu', 'PGSC0003DMG400029726' => 'stu', 'PGSC0003DMG401009243' => 'stu', 'PGSC0003DMG401031505' => 'stu', 'PGSC0003DMG402031505' => 'stu', 'Phvul.001G017600' => 'pvu', 'Phvul.002G193500' => 'pvu', 'Phvul.002G228900' => 'pvu', 'Phvul.002G236800' => 'pvu', 'Phvul.003G049500' => 'pvu', 'Phvul.005G072000' => 'pvu', 'Phvul.006G164800' => 'pvu', 'Phvul.006G185100' => 'pvu', 'Phvul.007G090000' => 'pvu', 'Potri.001G399800' => 'ptr', 'Potri.002G149900' => 'ptr', 'Potri.004G044100' => 'ptr', 'Potri.004G177600' => 'ptr', 'Potri.009G138000' => 'ptr', 'Potri.010G094000' => 'ptr', 'Potri.011G053000' => 'ptr', 'Potri.011G119300' => 'ptr', 'Potri.013G113700' => 'ptr', 'Potri.018G107800' => 'ptr', 'Potri.019G084100' => 'ptr', 'Pp3c14_23720' => 'ppa', 'Pp3c16_6340' => 'ppa', 'Pp3c23_13420' => 'ppa', 'Pp3c24_2740' => 'ppa', 'Pp3c25_860' => 'ppa', 'Pp3c8_21750' => 'ppa', 'Prupe.1G273000' => 'ppe', 'Prupe.1G273700' => 'ppe', 'Prupe.1G274100' => 'ppe', 'Prupe.2G023300' => 'ppe', 'Prupe.4G048000' => 'ppe', 'Prupe.4G080400' => 'ppe', 'Prupe.4G181200' => 'ppe', 'Prupe.8G056900' => 'ppe', 'Prupe.8G168700' => 'ppe', 'Psat1g189080' => 'psa', 'Psat1g204760' => 'psa', 'Psat4g175560' => 'psa', 'Psat4g177720' => 'psa', 'Psat5g244240' => 'psa', 'Psat6g010720' => 'psa', 'Psat6g187200' => 'psa', 'Psat7g072040' => 'psa', 'PSO017G3501' => 'pso', 'PSO063G2148' => 'pso', 'PSO063G5608' => 'pso', 'PSO210G6392' => 'pso', 'PSO541G2319' => 'pso', 'PSO541G2836' => 'pso', 'PSO541G4012' => 'pso', 'PSO541G6253' => 'pso', 'PSO675G0580' => 'pso', 'PSO675G0856' => 'pso', 'PSO675G5635' => 'pso', 'PSO675G9157' => 'pso', 'PSO832G1660' => 'pso', 'PSO832G1969' => 'pso', 'QL02p007186' => 'qlo', 'QL02p033904' => 'qlo', 'QL03p064391' => 'qlo', 'QL05p040593' => 'qlo', 'QL05p058242' => 'qlo', 'QL08p021825' => 'qlo', 'QL11p004981' => 'qlo', 'RcHm_v2.0_Chr1g0318301' => 'rch', 'RcHm_v2.0_Chr4g0418501' => 'rch', 'RcHm_v2.0_Chr4g0439971' => 'rch', 'RcHm_v2.0_Chr5g0008541' => 'rch', 'RcHm_v2.0_Chr5g0014101' => 'rch', 'RcHm_v2.0_Chr5g0014131' => 'rch', 'RcHm_v2.0_Chr5g0033621' => 'rch', 'RcHm_v2.0_Chr6g0272041' => 'rch', 'RcHm_v2.0_Chr6g0278831' => 'rch', 'Rhsim02G0130400' => 'rsi', 'Rhsim02G0171100' => 'rsi', 'Rhsim05G0053000' => 'rsi', 'Rhsim05G0053100' => 'rsi', 'Rhsim06G0096500' => 'rsi', 'Rhsim06G0096600' => 'rsi', 'Rhsim06G0199100' => 'rsi', 'Rhsim12G0062300' => 'rsi', 'Rhsim12G0062800' => 'rsi', 'Sabra02G0118600' => 'sbr', 'Sabra04G0027300' => 'sbr', 'Sabra04G0119500' => 'sbr', 'Sabra08G0112500' => 'sbr', 'Sabra11G0036800' => 'sbr', 'Sabra11G0103800' => 'sbr', 'Sabra13G0096300' => 'sbr', 'Sabra16G0262300' => 'sbr', 'Sabra18G0091700' => 'sbr', 'Sabra19G0095400' => 'sbr', 'SalBow6G3080' => 'sbo', 'SalBow7G1157' => 'sbo', 'SalBow7G2123' => 'sbo', 'SalBow7G2285' => 'sbo', 'SalBow7G3537' => 'sbo', 'SalBow8G2947' => 'sbo', 'SalBow8G4463' => 'sbo', 'SalBow8G5466' => 'sbo', 'Sc01g0001750' => 'sci', 'Sc02g0006640' => 'sci', 'Sc02g0006670' => 'sci', 'Sc04g0008220' => 'sci', 'Sc05g0006190' => 'sci', 'Sc08g0002760' => 'sci', 'Sc17g0006170' => 'sci', 'Sc22g0002050' => 'sci', 'Sc23g0001190' => 'sci', 'Sc24g0000980' => 'sci', 'Sed0006245' => 'sed', 'Sed0007543' => 'sed', 'Sed0009411' => 'sed', 'Sed0010765' => 'sed', 'Sed0012944' => 'sed', 'Sed0014682' => 'sed', 'Sed0016174' => 'sed', 'Sed0016796' => 'sed', 'Sed0020317' => 'sed', 'Sed0021467' => 'sed', 'SEGI_01316' => 'sgi', 'SEGI_03374' => 'sgi', 'SEGI_16265' => 'sgi', 'SEGI_18569' => 'sgi', 'SEGI_20351' => 'sgi', 'SEGI_26395' => 'sgi', 'SEGI_29469' => 'sgi', 'SEGI_34771' => 'sgi', 'SEGI_36769' => 'sgi', 'SEGI_37139' => 'sgi', 'SGA_v2.0_scaffold100G29687' => 'sas', 'SGA_v2.0_scaffold118G32472' => 'sas', 'SGA_v2.0_scaffold14G07051' => 'sas', 'SGA_v2.0_scaffold183G39845' => 'sas', 'SGA_v2.0_scaffold1G00174' => 'sas', 'SGA_v2.0_scaffold22G09714' => 'sas', 'SGA_v2.0_scaffold333G48992' => 'sas', 'SGA_v2.0_scaffold46G17491' => 'sas', 'SGA_v2.0_scaffold49G18294' => 'sas', 'SGA_v2.0_scaffold63G21658' => 'sas', 'SHI01741' => 'shi', 'SHI05771' => 'shi', 'SHI18077' => 'shi', 'SHI20525' => 'shi', 'SHI20527' => 'shi', 'SHI20528' => 'shi', 'SMO172G0185' => 'smo', 'SMO198G0020' => 'smo', 'SMO351G0006' => 'smo', 'SMO356G0118' => 'smo', 'SMO358G0296' => 'smo', 'SMO367G0079' => 'smo', 'SMO367G1277' => 'smo', 'Solyc01g014220.3' => 'sly', 'Solyc01g111770.2' => 'sly', 'Solyc02g078180.3' => 'sly', 'Solyc03g006430.3' => 'sly', 'Solyc03g006456.1' => 'sly', 'Solyc03g079860.2' => 'sly', 'Solyc04g079770.3' => 'sly', 'Solyc05g007430.4' => 'sly', 'Solyc07g063150.3' => 'sly', 'Solyc08g016620.3' => 'sly', 'Solyc09g057590.3' => 'sly', 'Solyc09g057600.1' => 'sly', 'Solyc10g009050.3' => 'sly', 'Solyc11g017420.2' => 'sly', 'Sopen01g053810' => 'spe', 'Sopen02g023040' => 'spe', 'Sopen03g002440' => 'spe', 'Sopen04g033350' => 'spe', 'Sopen05g003310' => 'spe', 'Sopen07g004050' => 'spe', 'Sopen07g031340' => 'spe', 'Sopen08g006990' => 'spe', 'Sopen10g004830' => 'spe', 'Sopen11g009370' => 'spe', 'Sp1g24450' => 'spa', 'Sp1g29670' => 'spa', 'Sp1g39600' => 'spa', 'Sp2g11080' => 'spa', 'Sp2g13970' => 'spa', 'Sp4g16130' => 'spa', 'Sp6g13080' => 'spa', 'Sp7g37270' => 'spa', 'TAR371G0065' => 'tar', 'TAR376G0340' => 'tar', 'TAR376G0435' => 'tar', 'TAR381G0002' => 'tar', 'TAR381G1236' => 'tar', 'TAR624G0055' => 'tar', 'TAR624G0324' => 'tar', 'TAR624G0696' => 'tar', 'TAR624G0906' => 'tar', 'TAR625G0107' => 'tar', 'TAR626G0015' => 'tar', 'TAR626G1356' => 'tar', 'TAR627G0888' => 'tar', 'TAR628G0399' => 'tar', 'TAR628G1327' => 'tar', 'TAR629G2831' => 'tar', 'TAR629G2874' => 'tar', 'TAR633G1432' => 'tar', 'TAR633G2771' => 'tar', 'THA.LOC104803394' => 'tha', 'THA.LOC104805153' => 'tha', 'THA.LOC104806784' => 'tha', 'THA.LOC104810473' => 'tha', 'THA.LOC104813100' => 'tha', 'THA.LOC104814215' => 'tha', 'THA.LOC104815554' => 'tha', 'THA.LOC104820544' => 'tha', 'THA.LOC104824754' => 'tha', 'THA.LOC104827717' => 'tha', 'Thecc.02G031400' => 'tca', 'Thecc.02G055900' => 'tca', 'Thecc.02G350800' => 'tca', 'Thecc.06G150900' => 'tca', 'Thecc.06G186600' => 'tca', 'Thecc.07G089600' => 'tca', 'Thecc.08G020400' => 'tca', 'Thecc.08G182100' => 'tca', 'Thhalv10000873m.g' => 'esa', 'Thhalv10004185m.g' => 'esa', 'Thhalv10006981m.g' => 'esa', 'Thhalv10007204m.g' => 'esa', 'Thhalv10011374m.g' => 'esa', 'Thhalv10013482m.g' => 'esa', 'Thhalv10017801m.g' => 'esa', 'Thhalv10024983m.g' => 'esa', 'TPR.G12072' => 'tpr', 'TPR.G15769' => 'tpr', 'TPR.G16504' => 'tpr', 'TPR.G16506' => 'tpr', 'TPR.G24345' => 'tpr', 'TPR.G26666' => 'tpr', 'TPR.G27320' => 'tpr', 'TPR.G31819' => 'tpr', 'TPR.G38879' => 'tpr', 'TPR.G39015' => 'tpr', 'TPR.G8819' => 'tpr', 'TWI09G0924' => 'twi', 'TWI12G0811' => 'twi', 'TWI12G1294' => 'twi', 'TWI31G0150' => 'twi', 'TWI36G1262' => 'twi', 'TWI38G1287' => 'twi', 'TWI38G1633' => 'twi', 'TWI38G1982' => 'twi', 'TWI39G0116' => 'twi', 'TWI60G1011' => 'twi', 'TWI63G0171' => 'twi', 'TWI73G0839' => 'twi', 'TWI79G1511' => 'twi', 'unitig_0.g915' => 'ugi', 'unitig_0.g916' => 'ugi', 'unitig_21.g20219' => 'ugi', 'unitig_21.g20416' => 'ugi', 'unitig_578.g16132' => 'ugi', 'unitig_578.g16718' => 'ugi', 'unitig_62.g23481' => 'ugi', 'unitig_744.g24535' => 'ugi', 'unitig_749.g13525' => 'ugi', 'vmacro01248' => 'vma', 'vmacro02290' => 'vma', 'vmacro10946' => 'vma', 'vmacro11865' => 'vma', 'vmacro12493' => 'vma', 'vmacro17322' => 'vma', 'vmacro21599' => 'vma', 'vmacro23041' => 'vma', 'VMungo0251G0004' => 'vmu', 'VMungo0251G2639' => 'vmu', 'VMungo0251G2967' => 'vmu', 'VMungo0540G0864' => 'vmu', 'VMungo0540G1569' => 'vmu', 'VMungo0647G0317' => 'vmu', 'VMungo0720G1373' => 'vmu', 'VMungo0720G1508' => 'vmu', 'VMungo1080G0485' => 'vmu', 'VMungo1215G3177' => 'vmu', 'Zm00001eb112600' => 'zma', 'Zm00001eb120220' => 'zma', 'Zm00001eb153240' => 'zma', 'Zm00001eb168880' => 'zma', 'Zm00001eb213920' => 'zma', 'Zm00001eb228280' => 'zma', 'Zm00001eb254580' => 'zma', 'Zm00001eb272180' => 'zma', 'Zm00001eb293190' => 'zma', 'Zm00001eb322930' => 'zma', 'Zm00001eb353360' => 'zma', 'Zm00001eb353390' => 'zma', 'Zm00001eb353430' => 'zma', 'Zm00001eb353440' => 'zma', 'Zm00001eb353780' => 'zma' ) $gf_id = 'HOM05D000499' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000499' ) $data_identifier = 'HOM05D000499' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 29, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 12, 'amhyb' => (int) 8, 'aly' => (int) 12, 'aox' => (int) 9, 'arhy' => (int) 26, 'ath' => (int) 8, 'atr' => (int) 7, 'acertr' => (int) 10, 'cqu' => (int) 15, 'bca' => (int) 29, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 11, 'cansat' => (int) 8, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 9, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 8, 'cpa' => (int) 10, 'csa' => (int) 7, 'camsi' => (int) 20, 'dca' => (int) 8, 'din' => (int) 12, 'dzi' => (int) 14, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 6, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 38, 'gra' => (int) 16, 'vvi' => (int) 8, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 5, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 11, 'lja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 11, 'mpo' => (int) 3, 'mbi' => (int) 14, 'mdo' => (int) 14, 'mtr' => (int) 8, 'cme' => (int) 9, 'egut' => (int) 9, 'ama' => (int) 11, 'nta' => (int) 17, 'nnu' => (int) 11, 'oeu' => (int) 18, 'osa' => (int) 8, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 6, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 9, 'rsi' => (int) 9, 'sbr' => (int) 10, 'sbo' => (int) 8, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 10, 'sas' => (int) 10, 'shi' => (int) 6, 'smo' => (int) 7, 'sly' => (int) 14, 'spe' => (int) 10, 'spa' => (int) 8, 'tar' => (int) 19, 'tha' => (int) 10, 'tca' => (int) 8, 'esa' => (int) 8, 'tpr' => (int) 11, 'twi' => (int) 13, 'ugi' => (int) 9, 'vma' => (int) 8, 'vmu' => (int) 10, 'zma' => (int) 15 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb353780' $species_info = array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ) $local_species = 'sun' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000499', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1066', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p29780' => 'bna', 'A02p33180' => 'bna', 'A03p16470' => 'bna', 'A03p66010' => 'bna', 'A04p25970' => 'bna', 'A06p01270' => 'bna', 'A06p46080' => 'bna', 'A07p11400' => 'bna', 'A08p01840' => 'bna', 'A08p08230' => 'bna', 'A08p25740' => 'bna', 'A09p32070' => 'bna', 'A09p37830' => 'bna', 'A09p42840' => 'bna', 'A09p42850' => 'bna', 'Aa31LG10G2060' => 'aar', 'Aa31LG2G7410' => 'aar', 'Aa31LG6G10200' => 'aar', 'Aa31LG6G16680' => 'aar', 'Aa31LG6G8470' => 'aar', 'Aa31LG9G12730' => 'aar', 'Aa31LG9G13680' => 'aar', 'Aa31LG9G14920' => 'aar', 'Aa31LG9G6650' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4977' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5467' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3254' => 'aag', 'Actinidia02578' => 'ach', 'Actinidia07693' => 'ach', 'Actinidia08413' => 'ach', 'Actinidia08414' => 'ach', 'Actinidia15289' => 'ach', 'Actinidia19871' => 'ach', 'Actinidia21475' => 'ach', 'Actinidia22576' => 'ach', 'Actinidia28327' => 'ach', 'Actinidia32491' => 'ach', 'Actinidia39463' => 'ach', 'Actinidia39571' => 'ach', 'Ah.01g013750' => 'amhyb', 'Ah.01g023210' => 'amhyb', 'Ah.04g164850' => 'amhyb', 'Ah.05g178060' => 'amhyb', 'Ah.07g204270' => 'amhyb', 'Ah.07g208480' => 'amhyb', 'Ah.09g237410' => 'amhyb', 'Ah.14g089460' => 'amhyb', 'AL1G41790' => 'aly', 'AL1G49050' => 'aly', 'AL1G53810' => 'aly', 'AL1G61400' => 'aly', 'AL4G18580' => 'aly', 'AL5G12510' => 'aly', 'AL5G12540' => 'aly', 'AL6G43230' => 'aly', 'AL7G10370' => 'aly', 'AL7G19250' => 'aly', 'AL8G12240' => 'aly', 'AL8G18540' => 'aly', 'Aqoxy1G02409' => 'aox', 'Aqoxy2G03993' => 'aox', 'Aqoxy3G03357' => 'aox', 'Aqoxy4G00785' => 'aox', 'Aqoxy5G02598' => 'aox', 'Aqoxy6G00132' => 'aox', 'Aqoxy7G01776' => 'aox', 'Aqoxy7G02316' => 'aox', 'Aqoxy7G03973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.12AFKW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B8730' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27IQR1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3F75VG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3RE0GA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41TCQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.527VTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FIR39' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5W8UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DA38EV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ63HS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H1I32C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HC27T5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4M8AP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7N3CZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9UVDZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LS1NQA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT1D4B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SKC4TM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCFV76' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF9Q1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQWD9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1ZM88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WE07RT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YCK7VH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJE6Q6' => 'arhy', 'AT1G28240' => 'ath', 'AT1G34550' => 'ath', 'AT1G53040' => 'ath', 'AT2G02910' => 'ath', 'AT4G09630' => 'ath', 'AT4G38500' => 'ath', 'AT5G42660' => 'ath', 'AT5G46220' => 'ath', 'ATR0152G026' => 'atr', 'ATR0564G343' => 'atr', 'ATR0706G151' => 'atr', 'ATR0733G207' => 'atr', 'ATR0751G234' => 'atr', 'ATR0807G048' => 'atr', 'ATR1091G084' => 'atr', 'Atru.chr10.1229' => 'acertr', 'Atru.chr10.1230' => 'acertr', 'Atru.chr10.1874' => 'acertr', 'Atru.chr11.1808' => 'acertr', 'Atru.chr13.1795' => 'acertr', 'Atru.chr13.570' => 'acertr', 'Atru.chr2.2608' => 'acertr', 'Atru.chr2.2609' => 'acertr', 'Atru.chr5.3428' => 'acertr', 'Atru.chr8.1171' => 'acertr', 'AUR62004651' => 'cqu', 'AUR62008675' => 'cqu', 'AUR62010014' => 'cqu', 'AUR62013004' => 'cqu', 'AUR62014825' => 'cqu', 'AUR62015015' => 'cqu', 'AUR62015151' => 'cqu', 'AUR62017020' => 'cqu', 'AUR62019422' => 'cqu', 'AUR62023570' => 'cqu', 'AUR62025571' => 'cqu', 'AUR62029098' => 'cqu', 'AUR62033863' => 'cqu', 'AUR62034296' => 'cqu', 'AUR62040075' => 'cqu', 'BcaB02g07334' => 'bca', 'BcaB02g10575' => 'bca', 'BcaB03g12119' => 'bca', 'BcaB03g12120' => 'bca', 'BcaB03g13945' => 'bca', 'BcaB04g17123' => 'bca', 'BcaB04g17867' => 'bca', 'BcaB04g19839' => 'bca', 'BcaB07g30317' => 'bca', 'BcaB07g32432' => 'bca', 'BcaB07g33362' => 'bca', 'BcaB08g36611' => 'bca', 'BcaC01g00028' => 'bca', 'BcaC01g01356' => 'bca', 'BcaC01g02034' => 'bca', 'BcaC01g06051' => 'bca', 'BcaC03g16839' => 'bca', 'BcaC03g17176' => 'bca', 'BcaC05g26829' => 'bca', 'BcaC06g31490' => 'bca', 'BcaC06g35344' => 'bca', 'BcaC06g36570' => 'bca', 'BcaC07g37537' => 'bca', 'BcaC08g43491' => 'bca', 'BcaC08g43773' => 'bca', 'BcaNung00234' => 'bca', 'BcaNung01982' => 'bca', 'BcaNung03707' => 'bca', 'BcaNung06454' => 'bca', 'BolC2t10762H' => 'bol', 'BolC2t11191H' => 'bol', 'BolC3t14322H' => 'bol', 'BolC3t19747H' => 'bol', 'BolC3t21425H' => 'bol', 'BolC4t27800H' => 'bol', 'BolC5t31423H' => 'bol', 'BolC6t35951H' => 'bol', 'BolC6t36282H' => 'bol', 'BolC7t40678H' => 'bol', 'BolC7t40679H' => 'bol', 'BolC7t42222H' => 'bol', 'BolC7t43492H' => 'bol', 'BolC7t46785H' => 'bol', 'BolC8t47853H' => 'bol', 'BolC9t56805H' => 'bol', 'BraA02t08000Z' => 'bra', 'BraA02t08341Z' => 'bra', 'BraA03t10936Z' => 'bra', 'BraA03t15657Z' => 'bra', 'BraA04t18100Z' => 'bra', 'BraA05t20523Z' => 'bra', 'BraA06t23353Z' => 'bra', 'BraA06t27473Z' => 'bra', 'BraA06t27769Z' => 'bra', 'BraA07t28928Z' => 'bra', 'BraA08t32236Z' => 'bra', 'BraA08t32841Z' => 'bra', 'BraA08t34524Z' => 'bra', 'BraA09t38742Z' => 'bra', 'BraA09t39295Z' => 'bra', 'C02p47180' => 'bna', 'C02p50990' => 'bna', 'C03p19360' => 'bna', 'C03p74950' => 'bna', 'C03p91000' => 'bna', 'C04p63260' => 'bna', 'C05p27050' => 'bna', 'C06p08750' => 'bna', 'C06p11490' => 'bna', 'C07p02820' => 'bna', 'C07p17180' => 'bna', 'C07p29440' => 'bna', 'C07p63730' => 'bna', 'C09p39260' => 'bna', 'CAN.G1164.34' => 'can', 'CAN.G1164.39' => 'can', 'CAN.G1530.3' => 'can', 'CAN.G162.61' => 'can', 'CAN.G176.6' => 'can', 'CAN.G289.49' => 'can', 'CAN.G370.21' => 'can', 'CAN.G370.22' => 'can', 'CAN.G371.117' => 'can', 'CAN.G58.37' => 'can', 'CAN.G588.98' => 'can', 'CANSAT21G2266' => 'cansat', 'CANSAT25G2799' => 'cansat', 'CANSAT35G0862' => 'cansat', 'CANSAT35G1704' => 'cansat', 'CANSAT35G1760' => 'cansat', 'CANSAT56G3971' => 'cansat', 'CANSAT56G4116' => 'cansat', 'CANSAT80G1259' => 'cansat', 'CARHR027730' => 'chi', 'CARHR033880' => 'chi', 'CARHR043270' => 'chi', 'CARHR145330' => 'chi', 'CARHR145340' => 'chi', 'CARHR175570' => 'chi', 'CARHR181570' => 'chi', 'CARHR258470' => 'chi', 'CARHR260490' => 'chi', 'CARHR294220' => 'chi', 'Carub.0001s2668' => 'cru', 'Carub.0001s3257' => 'cru', 'Carub.0001s4220' => 'cru', 'Carub.0005s0179' => 'cru', 'Carub.0006s2807' => 'cru', 'Carub.0007s0039' => 'cru', 'Carub.0008s0169' => 'cru', 'Carub.0008s0636' => 'cru', 'Ca_00338_v3' => 'car', 'Ca_00542_v3' => 'car', 'Ca_01844_v3' => 'car', 'Ca_10611_v3' => 'car', 'Ca_13326_v3' => 'car', 'Ca_17944_v3' => 'car', 'Ca_18546_v3' => 'car', 'Ca_24219_v3' => 'car', 'Ca_29972_v3' => 'car', 'CBR_g3681' => 'cbr', 'CBR_g40021' => 'cbr', 'Cc01_g08140' => 'ccan', 'Cc02_g13410' => 'ccan', 'Cc02_g37480' => 'ccan', 'Cc05_g12030' => 'ccan', 'Cc09_g03370' => 'ccan', 'Cc09_g10300' => 'ccan', 'Cc10_g03530' => 'ccan', 'Cc10_g11380' => 'ccan', 'CDE01G0176' => 'cde', 'CDE02G0675' => 'cde', 'CDE02G0942' => 'cde', 'CDE02G1153' => 'cde', 'CDE02G4177' => 'cde', 'CDE04G2117' => 'cde', 'CDE04G2736' => 'cde', 'CDE08G1161' => 'cde', 'CDE09G1238' => 'cde', 'Cfa000467' => 'cfa', 'Cfa000947' => 'cfa', 'Cfa004969' => 'cfa', 'Cfa005284' => 'cfa', 'Cfa008993' => 'cfa', 'Cfa018187' => 'cfa', 'Cfa018454' => 'cfa', 'Cfa020585' => 'cfa', 'Ciclev10000424m.g' => 'ccl', 'Ciclev10003605m.g' => 'ccl', 'Ciclev10007828m.g' => 'ccl', 'Ciclev10014620m.g' => 'ccl', 'Ciclev10015169m.g' => 'ccl', 'Ciclev10018291m.g' => 'ccl', 'Ciclev10028256m.g' => 'ccl', 'Ciclev10033822m.g' => 'ccl', 'CiPaw.05G060300' => 'cil', 'CiPaw.05G085000' => 'cil', 'CiPaw.06G083700' => 'cil', 'CiPaw.06G120300' => 'cil', 'CiPaw.09G060500' => 'cil', 'CiPaw.09G123800' => 'cil', 'CiPaw.11G169700' => 'cil', 'CiPaw.12G118300' => 'cil', 'CiPaw.15G071000' => 'cil', 'CiPaw.15G081900' => 'cil', 'ClCG01G024610' => 'cla', 'ClCG03G006070' => 'cla', 'ClCG05G019250' => 'cla', 'ClCG09G009500' => 'cla', 'ClCG11G008200' => 'cla', 'ClCG11G018080' => 'cla', 'COL.COLO4_17373' => 'col', 'COL.COLO4_22994' => 'col', 'COL.COLO4_26389' => 'col', 'COL.COLO4_27170' => 'col', 'COL.COLO4_31074' => 'col', 'COL.COLO4_31465' => 'col', 'COL.COLO4_36438' => 'col', 'COL.COLO4_36439' => 'col', 'Cpa.g.c38781' => 'cpa', 'Cpa.g.sc128.12' => 'cpa', 'Cpa.g.sc166.7' => 'cpa', 'Cpa.g.sc166.8' => 'cpa', 'Cpa.g.sc20.111' => 'cpa', 'Cpa.g.sc27.31' => 'cpa', 'Cpa.g.sc64.36' => 'cpa', 'Cpa.g.sc64.37' => 'cpa', 'Cpa.g.sc66.49' => 'cpa', 'Cpa.g.sc80.64' => 'cpa', 'CsaV3_1G012320' => 'csa', 'CsaV3_2G008480' => 'csa', 'CsaV3_2G033450' => 'csa', 'CsaV3_3G044830' => 'csa', 'CsaV3_4G033710' => 'csa', 'CsaV3_6G051730' => 'csa', 'CsaV3_7G025350' => 'csa', 'CSS0001067' => 'camsi', 'CSS0005996' => 'camsi', 'CSS0006590' => 'camsi', 'CSS0009673' => 'camsi', 'CSS0010201' => 'camsi', 'CSS0010549' => 'camsi', 'CSS0011364' => 'camsi', 'CSS0014473' => 'camsi', 'CSS0014961' => 'camsi', 'CSS0020191' => 'camsi', 'CSS0021165' => 'camsi', 'CSS0022306' => 'camsi', 'CSS0030591' => 'camsi', 'CSS0030696' => 'camsi', 'CSS0032653' => 'camsi', 'CSS0037487' => 'camsi', 'CSS0041102' => 'camsi', 'CSS0041261' => 'camsi', 'CSS0046246' => 'camsi', 'CSS0049256' => 'camsi', 'DCAR_004075' => 'dca', 'DCAR_011538' => 'dca', 'DCAR_019553' => 'dca', 'DCAR_020952' => 'dca', 'DCAR_021739' => 'dca', 'DCAR_027407' => 'dca', 'DCAR_027913' => 'dca', 'DCAR_028066' => 'dca', 'Dinv05899' => 'din', 'Dinv07563' => 'din', 'Dinv08010' => 'din', 'Dinv14125' => 'din', 'Dinv20172' => 'din', 'Dinv30743' => 'din', 'Dinv31229' => 'din', 'Dinv34162' => 'din', 'Dinv36028' => 'din', 'Dinv39368' => 'din', 'Dinv40565' => 'din', 'Dinv41706' => 'din', 'Duzib052G0089' => 'dzi', 'Duzib116G0641' => 'dzi', 'Duzib132G0069' => 'dzi', 'Duzib132G1219' => 'dzi', 'Duzib147G0278' => 'dzi', 'Duzib160G0480' => 'dzi', 'Duzib170G0661' => 'dzi', 'Duzib177G0591' => 'dzi', 'Duzib187G1353' => 'dzi', 'Duzib192G0858' => 'dzi', 'Duzib192G0883' => 'dzi', 'Duzib213G0506' => 'dzi', 'Duzib235G0289' => 'dzi', 'Duzib251G0422' => 'dzi', 'ECA232G3898' => 'eca', 'ECA233G5950' => 'eca', 'ECA234G1699' => 'eca', 'ECA234G2421' => 'eca', 'ECA236G0426' => 'eca', 'ECA236G4331' => 'eca', 'ECA248G2573' => 'eca', 'EL10Ac1g00077' => 'bvu', 'EL10Ac1g01746' => 'bvu', 'EL10Ac2g03464' => 'bvu', 'EL10Ac4g08176' => 'bvu', 'EL10Ac7g17521' => 'bvu', 'EL10Ac8g20386' => 'bvu', 'EL10Ac9g21343' => 'bvu', 'EL10Ac9g22688' => 'bvu', 'Eucgr.B03434' => 'egr', 'Eucgr.D00618' => 'egr', 'Eucgr.E02395' => 'egr', 'Eucgr.F01129' => 'egr', 'Eucgr.F02622' => 'egr', 'Eucgr.F04207' => 'egr', 'FAN01G0570' => 'fan', 'FAN03G3351' => 'fan', 'FAN06G3702' => 'fan', 'FAN07G2149' => 'fan', 'FAN10G3758' => 'fan', 'FAN11G1170' => 'fan', 'FAN11G2050' => 'fan', 'FAN11G2724' => 'fan', 'FAN12G1700' => 'fan', 'FAN12G2028' => 'fan', 'FAN15G1160' => 'fan', 'FAN15G3063' => 'fan', 'FAN16G2540' => 'fan', 'FAN16G3077' => 'fan', 'FAN16G3624' => 'fan', 'FAN17G0221' => 'fan', 'FAN20G2492' => 'fan', 'FAN20G2905' => 'fan', 'FAN21G0548' => 'fan', 'FAN21G1300' => 'fan', 'FAN22G0077' => 'fan', 'FAN22G1315' => 'fan', 'FAN24G1280' => 'fan', 'FAN24G1445' => 'fan', 'FAN24G3527' => 'fan', 'FAN25G0464' => 'fan', 'FAN25G2885' => 'fan', 'FAN25G3270' => 'fan', 'FAN27G1101' => 'fan', 'FAN27G2846' => 'fan', 'FAN27G3524' => 'fan', 'FvH4_2g11770' => 'fve', 'FvH4_2g15630' => 'fve', 'FvH4_3g05570' => 'fve', 'FvH4_3g09110' => 'fve', 'FvH4_3g19940' => 'fve', 'FvH4_4g04821' => 'fve', 'FvH4_4g31480' => 'fve', 'FvH4_7g01740' => 'fve', 'Glyma.05G130400' => 'gma', 'Glyma.05G156400' => 'gma', 'Glyma.07G197000' => 'gma', 'Glyma.08G085151' => 'gma', 'Glyma.08G114500' => 'gma', 'Glyma.08G300400' => 'gma', 'Glyma.10G215800' => 'gma', 'Glyma.12G224400' => 'gma', 'Glyma.13G179300' => 'gma', 'Glyma.13G218151' => 'gma', 'Glyma.13G238800' => 'gma', 'Glyma.13G276900' => 'gma', 'Glyma.14G078200' => 'gma', 'Glyma.15G074500' => 'gma', 'Glyma.15G094100' => 'gma', 'Glyma.17G247200' => 'gma', 'Glyma.18G120100' => 'gma', 'Glyma.20G176000' => 'gma', 'Gohir.A01G063600' => 'ghi', 'Gohir.A01G170301' => 'ghi', 'Gohir.A02G060500' => 'ghi', 'Gohir.A05G133850' => 'ghi', 'Gohir.A05G161400' => 'ghi', 'Gohir.A06G012900' => 'ghi', 'Gohir.A06G035901' => 'ghi', 'Gohir.A06G127100' => 'ghi', 'Gohir.A06G210500' => 'ghi', 'Gohir.A08G008650' => 'ghi', 'Gohir.A09G072700' => 'ghi', 'Gohir.A09G088301' => 'ghi', 'Gohir.A10G040600' => 'ghi', 'Gohir.A12G036300' => 'ghi', 'Gohir.A12G143350' => 'ghi', 'Gohir.A12G165500' => 'ghi', 'Gohir.A13G145700' => 'ghi', 'Gohir.D01G050000' => 'ghi', 'Gohir.D01G051366' => 'ghi', 'Gohir.D01G161350' => 'ghi', 'Gohir.D02G065900' => 'ghi', 'Gohir.D05G164200' => 'ghi', 'Gohir.D05G355500' => 'ghi', 'Gohir.D06G010400' => 'ghi', 'Gohir.D06G111250' => 'ghi', 'Gohir.D06G132000' => 'ghi', 'Gohir.D06G210500' => 'ghi', 'Gohir.D07G165675' => 'ghi', 'Gohir.D08G062240' => 'ghi', 'Gohir.D08G086101' => 'ghi', 'Gohir.D08G138060' => 'ghi', 'Gohir.D09G072300' => 'ghi', 'Gohir.D10G041400' => 'ghi', 'Gohir.D11G191020' => 'ghi', 'Gohir.D11G212066' => 'ghi', 'Gohir.D12G036300' => 'ghi', 'Gohir.D12G168600' => 'ghi', 'Gohir.D13G150600' => 'ghi', 'Gorai.001G057300' => 'gra', 'Gorai.002G069900' => 'gra', 'Gorai.002G200000' => 'gra', 'Gorai.003G067600' => 'gra', 'Gorai.005G074800' => 'gra', 'Gorai.006G087300' => 'gra', 'Gorai.008G037500' => 'gra', 'Gorai.008G181400' => 'gra', 'Gorai.009G169400' => 'gra', 'Gorai.009G387900' => 'gra', 'Gorai.010G013300' => 'gra', 'Gorai.010G153800' => 'gra', 'Gorai.010G255800' => 'gra', 'Gorai.011G043700' => 'gra', 'Gorai.011G198900' => 'gra', 'Gorai.013G168400' => 'gra', 'GSVIVG01005212001' => 'vvi', 'GSVIVG01006163001' => 'vvi', 'GSVIVG01009625001' => 'vvi', 'GSVIVG01014338001' => 'vvi', 'GSVIVG01020005001' => 'vvi', 'GSVIVG01021450001' => 'vvi', 'GSVIVG01023975001' => 'vvi', 'GSVIVG01034490001' => 'vvi', 'HanXRQChr04g0112071' => 'han', 'HanXRQChr05g0131151' => 'han', 'HanXRQChr09g0262371' => 'han', 'HanXRQChr09g0268401' => 'han', 'HanXRQChr10g0279241' => 'han', 'HanXRQChr10g0297961' => 'han', 'HanXRQChr11g0326231' => 'han', 'HanXRQChr11g0328471' => 'han', 'HanXRQChr16g0507941' => 'han', 'HanXRQChr17g0560211' => 'han', 'Haze_02108' => 'cav', 'Haze_02428' => 'cav', 'Haze_05593' => 'cav', 'Haze_06448' => 'cav', 'Haze_09427' => 'cav', 'Haze_12022' => 'cav', 'Haze_17612' => 'cav', 'Haze_17928' => 'cav', 'Hma1.2p1_0032F.1_g019250' => 'hma', 'Hma1.2p1_0163F.1_g072690' => 'hma', 'Hma1.2p1_0265F.1_g106710' => 'hma', 'Hma1.2p1_0286F.1_g113970' => 'hma', 'Hma1.2p1_0363F.1_g136640' => 'hma', 'Hma1.2p1_0584F.1_g183470' => 'hma', 'Hma1.2p1_0885F.1_g232570' => 'hma', 'HPP92_006022' => 'vpl', 'HPP92_007320' => 'vpl', 'HPP92_011521' => 'vpl', 'HPP92_019387' => 'vpl', 'HPP92_024038' => 'vpl', 'Hund05891' => 'sun', 'Hund06450' => 'sun', 'Hund12053' => 'sun', 'Hund16800' => 'sun', 'Hund21222' => 'sun', 'Hund22896' => 'sun', 'Hund23746' => 'sun', 'Hund27083' => 'sun', 'Lalb_Chr02g0141831' => 'lal', 'Lalb_Chr02g0141841' => 'lal', 'Lalb_Chr05g0220411' => 'lal', 'Lalb_Chr06g0162081' => 'lal', 'Lalb_Chr09g0327651' => 'lal', 'Lalb_Chr13g0295051' => 'lal', 'Lalb_Chr15g0086801' => 'lal', 'Lalb_Chr16g0383781' => 'lal', 'Lalb_Chr16g0383791' => 'lal', 'Lalb_Chr18g0055441' => 'lal', 'Lalb_Chr18g0059611' => 'lal', 'Lalb_Chr20g0109661' => 'lal', 'Lalb_Chr20g0109831' => 'lal', 'Lalb_Chr20g0121871' => 'lal', 'Lalb_Chr22g0355361' => 'lal', 'Lalb_Chr25g0286371' => 'lal', 'Lj1A1187G43' => 'lonja', 'Lj1A1205T50' => 'lonja', 'Lj1A800G33' => 'lonja', 'Lj1C1187T7' => 'lonja', 'Lj1C843T11' => 'lonja', 'Lj1g0010940' => 'lja', 'Lj2A288T69' => 'lonja', 'Lj3g0024276' => 'lja', 'Lj4A47T76' => 'lonja', 'Lj4g0005805' => 'lja', 'Lj4g0006097' => 'lja', 'Lj4g0008528' => 'lja', 'Lj4g0024907' => 'lja', 'Lj5g0012472' => 'lja', 'Lj5g0018648' => 'lja', 'Lj6C789G1' => 'lonja', 'Lj6g0004000' => 'lja', 'Lj7A292G67' => 'lonja', 'Lj7A292T64' => 'lonja', 'Lj9A400T58' => 'lonja', 'Lsat_1_v5_gn_1_126181' => 'lsa', 'Lsat_1_v5_gn_4_123041' => 'lsa', 'Lsat_1_v5_gn_4_133620' => 'lsa', 'Lsat_1_v5_gn_4_53221' => 'lsa', 'Lsat_1_v5_gn_4_71961' => 'lsa', 'Lsat_1_v5_gn_7_105241' => 'lsa', 'Lsat_1_v5_gn_7_21361' => 'lsa', 'Lsat_1_v5_gn_7_28860' => 'lsa', 'Lsat_1_v5_gn_7_31260' => 'lsa', 'Lsat_1_v5_gn_8_52801' => 'lsa', 'Manes.02G191400' => 'mes', 'Manes.03G110100' => 'mes', 'Manes.04G071100' => 'mes', 'Manes.05G100500' => 'mes', 'Manes.05G164700' => 'mes', 'Manes.15G087000' => 'mes', 'Manes.15G121500' => 'mes', 'Manes.16G028300' => 'mes', 'Manes.17G046100' => 'mes', 'Manes.17G069800' => 'mes', 'Manes.18G100500' => 'mes', 'Mapoly0002s0109' => 'mpo', 'Mapoly0024s0007' => 'mpo', 'Mapoly0089s0032' => 'mpo', 'MBI04_g42241_MAGBIO' => 'mbi', 'MBI05_g11988_MAGBIO' => 'mbi', 'MBI05_g35452_MAGBIO' => 'mbi', 'MBI07_g30179_MAGBIO' => 'mbi', 'MBI07_g35859_MAGBIO' => 'mbi', 'MBI07_g35860_MAGBIO' => 'mbi', 'MBI07_g37166_MAGBIO' => 'mbi', 'MBI08_g18172_MAGBIO' => 'mbi', 'MBI09_g08441_MAGBIO' => 'mbi', 'MBI13_g01676_MAGBIO' => 'mbi', 'MBI14_g42955_MAGBIO' => 'mbi', 'MBI16_g13161_MAGBIO' => 'mbi', 'MBI17_g27204_MAGBIO' => 'mbi', 'MBI19_g21595_MAGBIO' => 'mbi', 'MD00G1148400' => 'mdo', 'MD02G1301200' => 'mdo', 'MD03G1227800' => 'mdo', 'MD05G1041100' => 'mdo', 'MD05G1124800' => 'mdo', 'MD05G1284000' => 'mdo', 'MD05G1338800' => 'mdo', 'MD05G1338900' => 'mdo', 'MD07G1022800' => 'mdo', 'MD10G1047500' => 'mdo', 'MD10G1127500' => 'mdo', 'MD10G1262300' => 'mdo', 'MD10G1293800' => 'mdo', 'MD16G1074300' => 'mdo', 'Medtr1g021670' => 'mtr', 'Medtr1g096320' => 'mtr', 'Medtr2g013690' => 'mtr', 'Medtr2g019450' => 'mtr', 'Medtr2g085170' => 'mtr', 'Medtr4g088785' => 'mtr', 'Medtr8g055930' => 'mtr', 'Medtr8g085850' => 'mtr', 'MELO3C002605.2' => 'cme', 'MELO3C003891.2' => 'cme', 'MELO3C004012.2' => 'cme', 'MELO3C007134.2' => 'cme', 'MELO3C008118.2' => 'cme', 'MELO3C016700.2' => 'cme', 'MELO3C024127.2' => 'cme', 'MELO3C033361.2' => 'cme', 'MELO3C033362.2' => 'cme', 'Migut.C00430' => 'egut', 'Migut.C01246' => 'egut', 'Migut.E00101' => 'egut', 'Migut.H01486' => 'egut', 'Migut.H01939' => 'egut', 'Migut.K00360' => 'egut', 'Migut.M00910' => 'egut', 'Migut.M01139' => 'egut', 'Migut.N02677' => 'egut', 'MSTRG.13252' => 'ama', 'MSTRG.14701' => 'ama', 'MSTRG.1521' => 'ama', 'MSTRG.15884' => 'ama', 'MSTRG.16242' => 'ama', 'MSTRG.22285' => 'ama', 'MSTRG.22444' => 'ama', 'MSTRG.2349' => 'ama', 'MSTRG.26308' => 'ama', 'MSTRG.28296' => 'ama', 'MSTRG.9895' => 'ama', 'Nitab4.5_0000110g0060' => 'nta', 'Nitab4.5_0000420g0130' => 'nta', 'Nitab4.5_0000422g0030' => 'nta', 'Nitab4.5_0000560g0180' => 'nta', 'Nitab4.5_0000703g0100' => 'nta', 'Nitab4.5_0000786g0200' => 'nta', 'Nitab4.5_0001336g0020' => 'nta', 'Nitab4.5_0001796g0030' => 'nta', 'Nitab4.5_0003348g0060' => 'nta', 'Nitab4.5_0003698g0040' => 'nta', 'Nitab4.5_0003942g0090' => 'nta', 'Nitab4.5_0004775g0070' => 'nta', 'Nitab4.5_0004864g0030' => 'nta', 'Nitab4.5_0005615g0020' => 'nta', 'Nitab4.5_0009288g0030' => 'nta', 'Nitab4.5_0009341g0010' => 'nta', 'Nitab4.5_0009535g0010' => 'nta', 'Nn1g03995' => 'nnu', 'Nn1g04100' => 'nnu', 'Nn1g06530' => 'nnu', 'Nn3g16404' => 'nnu', 'Nn3g17212' => 'nnu', 'Nn3g20776' => 'nnu', 'Nn3g21923' => 'nnu', 'Nn5g27737' => 'nnu', 'Nn5g29461' => 'nnu', 'Nn7g38355' => 'nnu', 'Nn8g39873' => 'nnu', 'Oeu000548.2' => 'oeu', 'Oeu004672.1' => 'oeu', 'Oeu015605.2' => 'oeu', 'Oeu016092.1' => 'oeu', 'Oeu017879.3' => 'oeu', 'Oeu024910.1' => 'oeu', 'Oeu028965.1' => 'oeu', 'Oeu031269.1' => 'oeu', 'Oeu031270.1' => 'oeu', 'Oeu032535.1' => 'oeu', 'Oeu034151.1' => 'oeu', 'Oeu034152.1' => 'oeu', 'Oeu034588.2' => 'oeu', 'Oeu050846.1' => 'oeu', 'Oeu050849.2' => 'oeu', 'Oeu051063.2' => 'oeu', 'Oeu052368.1' => 'oeu', 'Oeu052370.1' => 'oeu', 'Os01g0210400' => 'osa', 'Os01g0304300' => 'osa', 'Os01g0749100' => 'osa', 'Os02g0745800' => 'osa', 'Os03g0769050' => 'osa', 'Os05g0531500' => 'osa', 'Os06g0724300' => 'osa', 'Os11g0198100' => 'osa', 'Peaxi162Scf00069g01425' => 'pax', 'Peaxi162Scf00280g00811' => 'pax', 'Peaxi162Scf00310g00615' => 'pax', 'Peaxi162Scf00362g00542' => 'pax', 'Peaxi162Scf00461g00310' => 'pax', 'Peaxi162Scf00530g00118' => 'pax', 'Peaxi162Scf00541g00057' => 'pax', 'Peaxi162Scf00661g00017' => 'pax', 'Peaxi162Scf00926g00027' => 'pax', 'Peaxi162Scf01064g00263' => 'pax', 'Peaxi162Scf01211g00135' => 'pax', 'PGR004G2336' => 'pgr', 'PGR042G0327' => 'pgr', 'PGR042G1957' => 'pgr', 'PGR042G2003' => 'pgr', 'PGR042G3929' => 'pgr', 'PGR083G1137' => 'pgr', 'PGR083G1364' => 'pgr', 'PGSC0003DMG400003381' => 'stu', 'PGSC0003DMG400003417' => 'stu', 'PGSC0003DMG400008981' => 'stu', 'PGSC0003DMG400012417' => 'stu', 'PGSC0003DMG400012823' => 'stu', 'PGSC0003DMG400016885' => 'stu', 'PGSC0003DMG400022812' => 'stu', 'PGSC0003DMG400029726' => 'stu', 'PGSC0003DMG401009243' => 'stu', 'PGSC0003DMG401031505' => 'stu', 'PGSC0003DMG402031505' => 'stu', 'Phvul.001G017600' => 'pvu', 'Phvul.002G193500' => 'pvu', 'Phvul.002G228900' => 'pvu', 'Phvul.002G236800' => 'pvu', 'Phvul.003G049500' => 'pvu', 'Phvul.005G072000' => 'pvu', 'Phvul.006G164800' => 'pvu', 'Phvul.006G185100' => 'pvu', 'Phvul.007G090000' => 'pvu', 'Potri.001G399800' => 'ptr', 'Potri.002G149900' => 'ptr', 'Potri.004G044100' => 'ptr', 'Potri.004G177600' => 'ptr', 'Potri.009G138000' => 'ptr', 'Potri.010G094000' => 'ptr', 'Potri.011G053000' => 'ptr', 'Potri.011G119300' => 'ptr', 'Potri.013G113700' => 'ptr', 'Potri.018G107800' => 'ptr', 'Potri.019G084100' => 'ptr', 'Pp3c14_23720' => 'ppa', 'Pp3c16_6340' => 'ppa', 'Pp3c23_13420' => 'ppa', 'Pp3c24_2740' => 'ppa', 'Pp3c25_860' => 'ppa', 'Pp3c8_21750' => 'ppa', 'Prupe.1G273000' => 'ppe', 'Prupe.1G273700' => 'ppe', 'Prupe.1G274100' => 'ppe', 'Prupe.2G023300' => 'ppe', 'Prupe.4G048000' => 'ppe', 'Prupe.4G080400' => 'ppe', 'Prupe.4G181200' => 'ppe', 'Prupe.8G056900' => 'ppe', 'Prupe.8G168700' => 'ppe', 'Psat1g189080' => 'psa', 'Psat1g204760' => 'psa', 'Psat4g175560' => 'psa', 'Psat4g177720' => 'psa', 'Psat5g244240' => 'psa', 'Psat6g010720' => 'psa', 'Psat6g187200' => 'psa', 'Psat7g072040' => 'psa', 'PSO017G3501' => 'pso', 'PSO063G2148' => 'pso', 'PSO063G5608' => 'pso', 'PSO210G6392' => 'pso', 'PSO541G2319' => 'pso', 'PSO541G2836' => 'pso', 'PSO541G4012' => 'pso', 'PSO541G6253' => 'pso', 'PSO675G0580' => 'pso', 'PSO675G0856' => 'pso', 'PSO675G5635' => 'pso', 'PSO675G9157' => 'pso', 'PSO832G1660' => 'pso', 'PSO832G1969' => 'pso', 'QL02p007186' => 'qlo', 'QL02p033904' => 'qlo', 'QL03p064391' => 'qlo', 'QL05p040593' => 'qlo', 'QL05p058242' => 'qlo', 'QL08p021825' => 'qlo', 'QL11p004981' => 'qlo', 'RcHm_v2.0_Chr1g0318301' => 'rch', 'RcHm_v2.0_Chr4g0418501' => 'rch', 'RcHm_v2.0_Chr4g0439971' => 'rch', 'RcHm_v2.0_Chr5g0008541' => 'rch', 'RcHm_v2.0_Chr5g0014101' => 'rch', 'RcHm_v2.0_Chr5g0014131' => 'rch', 'RcHm_v2.0_Chr5g0033621' => 'rch', 'RcHm_v2.0_Chr6g0272041' => 'rch', 'RcHm_v2.0_Chr6g0278831' => 'rch', 'Rhsim02G0130400' => 'rsi', 'Rhsim02G0171100' => 'rsi', 'Rhsim05G0053000' => 'rsi', 'Rhsim05G0053100' => 'rsi', 'Rhsim06G0096500' => 'rsi', 'Rhsim06G0096600' => 'rsi', 'Rhsim06G0199100' => 'rsi', 'Rhsim12G0062300' => 'rsi', 'Rhsim12G0062800' => 'rsi', 'Sabra02G0118600' => 'sbr', 'Sabra04G0027300' => 'sbr', 'Sabra04G0119500' => 'sbr', 'Sabra08G0112500' => 'sbr', 'Sabra11G0036800' => 'sbr', 'Sabra11G0103800' => 'sbr', 'Sabra13G0096300' => 'sbr', 'Sabra16G0262300' => 'sbr', 'Sabra18G0091700' => 'sbr', 'Sabra19G0095400' => 'sbr', 'SalBow6G3080' => 'sbo', 'SalBow7G1157' => 'sbo', 'SalBow7G2123' => 'sbo', 'SalBow7G2285' => 'sbo', 'SalBow7G3537' => 'sbo', 'SalBow8G2947' => 'sbo', 'SalBow8G4463' => 'sbo', 'SalBow8G5466' => 'sbo', 'Sc01g0001750' => 'sci', 'Sc02g0006640' => 'sci', 'Sc02g0006670' => 'sci', 'Sc04g0008220' => 'sci', 'Sc05g0006190' => 'sci', 'Sc08g0002760' => 'sci', 'Sc17g0006170' => 'sci', 'Sc22g0002050' => 'sci', 'Sc23g0001190' => 'sci', 'Sc24g0000980' => 'sci', 'Sed0006245' => 'sed', 'Sed0007543' => 'sed', 'Sed0009411' => 'sed', 'Sed0010765' => 'sed', 'Sed0012944' => 'sed', 'Sed0014682' => 'sed', 'Sed0016174' => 'sed', 'Sed0016796' => 'sed', 'Sed0020317' => 'sed', 'Sed0021467' => 'sed', 'SEGI_01316' => 'sgi', 'SEGI_03374' => 'sgi', 'SEGI_16265' => 'sgi', 'SEGI_18569' => 'sgi', 'SEGI_20351' => 'sgi', 'SEGI_26395' => 'sgi', 'SEGI_29469' => 'sgi', 'SEGI_34771' => 'sgi', 'SEGI_36769' => 'sgi', 'SEGI_37139' => 'sgi', 'SGA_v2.0_scaffold100G29687' => 'sas', 'SGA_v2.0_scaffold118G32472' => 'sas', 'SGA_v2.0_scaffold14G07051' => 'sas', 'SGA_v2.0_scaffold183G39845' => 'sas', 'SGA_v2.0_scaffold1G00174' => 'sas', 'SGA_v2.0_scaffold22G09714' => 'sas', 'SGA_v2.0_scaffold333G48992' => 'sas', 'SGA_v2.0_scaffold46G17491' => 'sas', 'SGA_v2.0_scaffold49G18294' => 'sas', 'SGA_v2.0_scaffold63G21658' => 'sas', 'SHI01741' => 'shi', 'SHI05771' => 'shi', 'SHI18077' => 'shi', 'SHI20525' => 'shi', 'SHI20527' => 'shi', 'SHI20528' => 'shi', 'SMO172G0185' => 'smo', 'SMO198G0020' => 'smo', 'SMO351G0006' => 'smo', 'SMO356G0118' => 'smo', 'SMO358G0296' => 'smo', 'SMO367G0079' => 'smo', 'SMO367G1277' => 'smo', 'Solyc01g014220.3' => 'sly', 'Solyc01g111770.2' => 'sly', 'Solyc02g078180.3' => 'sly', 'Solyc03g006430.3' => 'sly', 'Solyc03g006456.1' => 'sly', 'Solyc03g079860.2' => 'sly', 'Solyc04g079770.3' => 'sly', 'Solyc05g007430.4' => 'sly', 'Solyc07g063150.3' => 'sly', 'Solyc08g016620.3' => 'sly', 'Solyc09g057590.3' => 'sly', 'Solyc09g057600.1' => 'sly', 'Solyc10g009050.3' => 'sly', 'Solyc11g017420.2' => 'sly', 'Sopen01g053810' => 'spe', 'Sopen02g023040' => 'spe', 'Sopen03g002440' => 'spe', 'Sopen04g033350' => 'spe', 'Sopen05g003310' => 'spe', 'Sopen07g004050' => 'spe', 'Sopen07g031340' => 'spe', 'Sopen08g006990' => 'spe', 'Sopen10g004830' => 'spe', 'Sopen11g009370' => 'spe', 'Sp1g24450' => 'spa', 'Sp1g29670' => 'spa', 'Sp1g39600' => 'spa', 'Sp2g11080' => 'spa', 'Sp2g13970' => 'spa', 'Sp4g16130' => 'spa', 'Sp6g13080' => 'spa', 'Sp7g37270' => 'spa', 'TAR371G0065' => 'tar', 'TAR376G0340' => 'tar', 'TAR376G0435' => 'tar', 'TAR381G0002' => 'tar', 'TAR381G1236' => 'tar', 'TAR624G0055' => 'tar', 'TAR624G0324' => 'tar', 'TAR624G0696' => 'tar', 'TAR624G0906' => 'tar', 'TAR625G0107' => 'tar', 'TAR626G0015' => 'tar', 'TAR626G1356' => 'tar', 'TAR627G0888' => 'tar', 'TAR628G0399' => 'tar', 'TAR628G1327' => 'tar', 'TAR629G2831' => 'tar', 'TAR629G2874' => 'tar', 'TAR633G1432' => 'tar', 'TAR633G2771' => 'tar', 'THA.LOC104803394' => 'tha', 'THA.LOC104805153' => 'tha', 'THA.LOC104806784' => 'tha', 'THA.LOC104810473' => 'tha', 'THA.LOC104813100' => 'tha', 'THA.LOC104814215' => 'tha', 'THA.LOC104815554' => 'tha', 'THA.LOC104820544' => 'tha', 'THA.LOC104824754' => 'tha', 'THA.LOC104827717' => 'tha', 'Thecc.02G031400' => 'tca', 'Thecc.02G055900' => 'tca', 'Thecc.02G350800' => 'tca', 'Thecc.06G150900' => 'tca', 'Thecc.06G186600' => 'tca', 'Thecc.07G089600' => 'tca', 'Thecc.08G020400' => 'tca', 'Thecc.08G182100' => 'tca', 'Thhalv10000873m.g' => 'esa', 'Thhalv10004185m.g' => 'esa', 'Thhalv10006981m.g' => 'esa', 'Thhalv10007204m.g' => 'esa', 'Thhalv10011374m.g' => 'esa', 'Thhalv10013482m.g' => 'esa', 'Thhalv10017801m.g' => 'esa', 'Thhalv10024983m.g' => 'esa', 'TPR.G12072' => 'tpr', 'TPR.G15769' => 'tpr', 'TPR.G16504' => 'tpr', 'TPR.G16506' => 'tpr', 'TPR.G24345' => 'tpr', 'TPR.G26666' => 'tpr', 'TPR.G27320' => 'tpr', 'TPR.G31819' => 'tpr', 'TPR.G38879' => 'tpr', 'TPR.G39015' => 'tpr', 'TPR.G8819' => 'tpr', 'TWI09G0924' => 'twi', 'TWI12G0811' => 'twi', 'TWI12G1294' => 'twi', 'TWI31G0150' => 'twi', 'TWI36G1262' => 'twi', 'TWI38G1287' => 'twi', 'TWI38G1633' => 'twi', 'TWI38G1982' => 'twi', 'TWI39G0116' => 'twi', 'TWI60G1011' => 'twi', 'TWI63G0171' => 'twi', 'TWI73G0839' => 'twi', 'TWI79G1511' => 'twi', 'unitig_0.g915' => 'ugi', 'unitig_0.g916' => 'ugi', 'unitig_21.g20219' => 'ugi', 'unitig_21.g20416' => 'ugi', 'unitig_578.g16132' => 'ugi', 'unitig_578.g16718' => 'ugi', 'unitig_62.g23481' => 'ugi', 'unitig_744.g24535' => 'ugi', 'unitig_749.g13525' => 'ugi', 'vmacro01248' => 'vma', 'vmacro02290' => 'vma', 'vmacro10946' => 'vma', 'vmacro11865' => 'vma', 'vmacro12493' => 'vma', 'vmacro17322' => 'vma', 'vmacro21599' => 'vma', 'vmacro23041' => 'vma', 'VMungo0251G0004' => 'vmu', 'VMungo0251G2639' => 'vmu', 'VMungo0251G2967' => 'vmu', 'VMungo0540G0864' => 'vmu', 'VMungo0540G1569' => 'vmu', 'VMungo0647G0317' => 'vmu', 'VMungo0720G1373' => 'vmu', 'VMungo0720G1508' => 'vmu', 'VMungo1080G0485' => 'vmu', 'VMungo1215G3177' => 'vmu', 'Zm00001eb112600' => 'zma', 'Zm00001eb120220' => 'zma', 'Zm00001eb153240' => 'zma', 'Zm00001eb168880' => 'zma', 'Zm00001eb213920' => 'zma', 'Zm00001eb228280' => 'zma', 'Zm00001eb254580' => 'zma', 'Zm00001eb272180' => 'zma', 'Zm00001eb293190' => 'zma', 'Zm00001eb322930' => 'zma', 'Zm00001eb353360' => 'zma', 'Zm00001eb353390' => 'zma', 'Zm00001eb353430' => 'zma', 'Zm00001eb353440' => 'zma', 'Zm00001eb353780' => 'zma' ), 'gf_id' => 'HOM05D000499', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000499' ), 'data_identifier' => 'HOM05D000499', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000499', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1066', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p29780' => 'bna', 'A02p33180' => 'bna', 'A03p16470' => 'bna', 'A03p66010' => 'bna', 'A04p25970' => 'bna', 'A06p01270' => 'bna', 'A06p46080' => 'bna', 'A07p11400' => 'bna', 'A08p01840' => 'bna', 'A08p08230' => 'bna', 'A08p25740' => 'bna', 'A09p32070' => 'bna', 'A09p37830' => 'bna', 'A09p42840' => 'bna', 'A09p42850' => 'bna', 'Aa31LG10G2060' => 'aar', 'Aa31LG2G7410' => 'aar', 'Aa31LG6G10200' => 'aar', 'Aa31LG6G16680' => 'aar', 'Aa31LG6G8470' => 'aar', 'Aa31LG9G12730' => 'aar', 'Aa31LG9G13680' => 'aar', 'Aa31LG9G14920' => 'aar', 'Aa31LG9G6650' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4977' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5467' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3254' => 'aag', 'Actinidia02578' => 'ach', 'Actinidia07693' => 'ach', 'Actinidia08413' => 'ach', 'Actinidia08414' => 'ach', 'Actinidia15289' => 'ach', 'Actinidia19871' => 'ach', 'Actinidia21475' => 'ach', 'Actinidia22576' => 'ach', 'Actinidia28327' => 'ach', 'Actinidia32491' => 'ach', 'Actinidia39463' => 'ach', 'Actinidia39571' => 'ach', 'Ah.01g013750' => 'amhyb', 'Ah.01g023210' => 'amhyb', 'Ah.04g164850' => 'amhyb', 'Ah.05g178060' => 'amhyb', 'Ah.07g204270' => 'amhyb', 'Ah.07g208480' => 'amhyb', 'Ah.09g237410' => 'amhyb', 'Ah.14g089460' => 'amhyb', 'AL1G41790' => 'aly', 'AL1G49050' => 'aly', 'AL1G53810' => 'aly', 'AL1G61400' => 'aly', 'AL4G18580' => 'aly', 'AL5G12510' => 'aly', 'AL5G12540' => 'aly', 'AL6G43230' => 'aly', 'AL7G10370' => 'aly', 'AL7G19250' => 'aly', 'AL8G12240' => 'aly', 'AL8G18540' => 'aly', 'Aqoxy1G02409' => 'aox', 'Aqoxy2G03993' => 'aox', 'Aqoxy3G03357' => 'aox', 'Aqoxy4G00785' => 'aox', 'Aqoxy5G02598' => 'aox', 'Aqoxy6G00132' => 'aox', 'Aqoxy7G01776' => 'aox', 'Aqoxy7G02316' => 'aox', 'Aqoxy7G03973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.12AFKW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B8730' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27IQR1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3F75VG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3RE0GA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41TCQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.527VTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FIR39' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5W8UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DA38EV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ63HS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H1I32C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HC27T5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4M8AP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7N3CZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9UVDZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LS1NQA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT1D4B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SKC4TM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCFV76' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF9Q1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQWD9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1ZM88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WE07RT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YCK7VH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJE6Q6' => 'arhy', 'AT1G28240' => 'ath', 'AT1G34550' => 'ath', 'AT1G53040' => 'ath', 'AT2G02910' => 'ath', 'AT4G09630' => 'ath', 'AT4G38500' => 'ath', 'AT5G42660' => 'ath', 'AT5G46220' => 'ath', 'ATR0152G026' => 'atr', 'ATR0564G343' => 'atr', 'ATR0706G151' => 'atr', 'ATR0733G207' => 'atr', 'ATR0751G234' => 'atr', 'ATR0807G048' => 'atr', 'ATR1091G084' => 'atr', 'Atru.chr10.1229' => 'acertr', 'Atru.chr10.1230' => 'acertr', 'Atru.chr10.1874' => 'acertr', 'Atru.chr11.1808' => 'acertr', 'Atru.chr13.1795' => 'acertr', 'Atru.chr13.570' => 'acertr', 'Atru.chr2.2608' => 'acertr', 'Atru.chr2.2609' => 'acertr', 'Atru.chr5.3428' => 'acertr', 'Atru.chr8.1171' => 'acertr', 'AUR62004651' => 'cqu', 'AUR62008675' => 'cqu', 'AUR62010014' => 'cqu', 'AUR62013004' => 'cqu', 'AUR62014825' => 'cqu', 'AUR62015015' => 'cqu', 'AUR62015151' => 'cqu', 'AUR62017020' => 'cqu', 'AUR62019422' => 'cqu', 'AUR62023570' => 'cqu', 'AUR62025571' => 'cqu', 'AUR62029098' => 'cqu', 'AUR62033863' => 'cqu', 'AUR62034296' => 'cqu', 'AUR62040075' => 'cqu', 'BcaB02g07334' => 'bca', 'BcaB02g10575' => 'bca', 'BcaB03g12119' => 'bca', 'BcaB03g12120' => 'bca', 'BcaB03g13945' => 'bca', 'BcaB04g17123' => 'bca', 'BcaB04g17867' => 'bca', 'BcaB04g19839' => 'bca', 'BcaB07g30317' => 'bca', 'BcaB07g32432' => 'bca', 'BcaB07g33362' => 'bca', 'BcaB08g36611' => 'bca', 'BcaC01g00028' => 'bca', 'BcaC01g01356' => 'bca', 'BcaC01g02034' => 'bca', 'BcaC01g06051' => 'bca', 'BcaC03g16839' => 'bca', 'BcaC03g17176' => 'bca', 'BcaC05g26829' => 'bca', 'BcaC06g31490' => 'bca', 'BcaC06g35344' => 'bca', 'BcaC06g36570' => 'bca', 'BcaC07g37537' => 'bca', 'BcaC08g43491' => 'bca', 'BcaC08g43773' => 'bca', 'BcaNung00234' => 'bca', 'BcaNung01982' => 'bca', 'BcaNung03707' => 'bca', 'BcaNung06454' => 'bca', 'BolC2t10762H' => 'bol', 'BolC2t11191H' => 'bol', 'BolC3t14322H' => 'bol', 'BolC3t19747H' => 'bol', 'BolC3t21425H' => 'bol', 'BolC4t27800H' => 'bol', 'BolC5t31423H' => 'bol', 'BolC6t35951H' => 'bol', 'BolC6t36282H' => 'bol', 'BolC7t40678H' => 'bol', 'BolC7t40679H' => 'bol', 'BolC7t42222H' => 'bol', 'BolC7t43492H' => 'bol', 'BolC7t46785H' => 'bol', 'BolC8t47853H' => 'bol', 'BolC9t56805H' => 'bol', 'BraA02t08000Z' => 'bra', 'BraA02t08341Z' => 'bra', 'BraA03t10936Z' => 'bra', 'BraA03t15657Z' => 'bra', 'BraA04t18100Z' => 'bra', 'BraA05t20523Z' => 'bra', 'BraA06t23353Z' => 'bra', 'BraA06t27473Z' => 'bra', 'BraA06t27769Z' => 'bra', 'BraA07t28928Z' => 'bra', 'BraA08t32236Z' => 'bra', 'BraA08t32841Z' => 'bra', 'BraA08t34524Z' => 'bra', 'BraA09t38742Z' => 'bra', 'BraA09t39295Z' => 'bra', 'C02p47180' => 'bna', 'C02p50990' => 'bna', 'C03p19360' => 'bna', 'C03p74950' => 'bna', 'C03p91000' => 'bna', 'C04p63260' => 'bna', 'C05p27050' => 'bna', 'C06p08750' => 'bna', 'C06p11490' => 'bna', 'C07p02820' => 'bna', 'C07p17180' => 'bna', 'C07p29440' => 'bna', 'C07p63730' => 'bna', 'C09p39260' => 'bna', 'CAN.G1164.34' => 'can', 'CAN.G1164.39' => 'can', 'CAN.G1530.3' => 'can', 'CAN.G162.61' => 'can', 'CAN.G176.6' => 'can', 'CAN.G289.49' => 'can', 'CAN.G370.21' => 'can', 'CAN.G370.22' => 'can', 'CAN.G371.117' => 'can', 'CAN.G58.37' => 'can', 'CAN.G588.98' => 'can', 'CANSAT21G2266' => 'cansat', 'CANSAT25G2799' => 'cansat', 'CANSAT35G0862' => 'cansat', 'CANSAT35G1704' => 'cansat', 'CANSAT35G1760' => 'cansat', 'CANSAT56G3971' => 'cansat', 'CANSAT56G4116' => 'cansat', 'CANSAT80G1259' => 'cansat', 'CARHR027730' => 'chi', 'CARHR033880' => 'chi', 'CARHR043270' => 'chi', 'CARHR145330' => 'chi', 'CARHR145340' => 'chi', 'CARHR175570' => 'chi', 'CARHR181570' => 'chi', 'CARHR258470' => 'chi', 'CARHR260490' => 'chi', 'CARHR294220' => 'chi', 'Carub.0001s2668' => 'cru', 'Carub.0001s3257' => 'cru', 'Carub.0001s4220' => 'cru', 'Carub.0005s0179' => 'cru', 'Carub.0006s2807' => 'cru', 'Carub.0007s0039' => 'cru', 'Carub.0008s0169' => 'cru', 'Carub.0008s0636' => 'cru', 'Ca_00338_v3' => 'car', 'Ca_00542_v3' => 'car', 'Ca_01844_v3' => 'car', 'Ca_10611_v3' => 'car', 'Ca_13326_v3' => 'car', 'Ca_17944_v3' => 'car', 'Ca_18546_v3' => 'car', 'Ca_24219_v3' => 'car', 'Ca_29972_v3' => 'car', 'CBR_g3681' => 'cbr', 'CBR_g40021' => 'cbr', 'Cc01_g08140' => 'ccan', 'Cc02_g13410' => 'ccan', 'Cc02_g37480' => 'ccan', 'Cc05_g12030' => 'ccan', 'Cc09_g03370' => 'ccan', 'Cc09_g10300' => 'ccan', 'Cc10_g03530' => 'ccan', 'Cc10_g11380' => 'ccan', 'CDE01G0176' => 'cde', 'CDE02G0675' => 'cde', 'CDE02G0942' => 'cde', 'CDE02G1153' => 'cde', 'CDE02G4177' => 'cde', 'CDE04G2117' => 'cde', 'CDE04G2736' => 'cde', 'CDE08G1161' => 'cde', 'CDE09G1238' => 'cde', 'Cfa000467' => 'cfa', 'Cfa000947' => 'cfa', 'Cfa004969' => 'cfa', 'Cfa005284' => 'cfa', 'Cfa008993' => 'cfa', 'Cfa018187' => 'cfa', 'Cfa018454' => 'cfa', 'Cfa020585' => 'cfa', 'Ciclev10000424m.g' => 'ccl', 'Ciclev10003605m.g' => 'ccl', 'Ciclev10007828m.g' => 'ccl', 'Ciclev10014620m.g' => 'ccl', 'Ciclev10015169m.g' => 'ccl', 'Ciclev10018291m.g' => 'ccl', 'Ciclev10028256m.g' => 'ccl', 'Ciclev10033822m.g' => 'ccl', 'CiPaw.05G060300' => 'cil', 'CiPaw.05G085000' => 'cil', 'CiPaw.06G083700' => 'cil', 'CiPaw.06G120300' => 'cil', 'CiPaw.09G060500' => 'cil', 'CiPaw.09G123800' => 'cil', 'CiPaw.11G169700' => 'cil', 'CiPaw.12G118300' => 'cil', 'CiPaw.15G071000' => 'cil', 'CiPaw.15G081900' => 'cil', 'ClCG01G024610' => 'cla', 'ClCG03G006070' => 'cla', 'ClCG05G019250' => 'cla', 'ClCG09G009500' => 'cla', 'ClCG11G008200' => 'cla', 'ClCG11G018080' => 'cla', 'COL.COLO4_17373' => 'col', 'COL.COLO4_22994' => 'col', 'COL.COLO4_26389' => 'col', 'COL.COLO4_27170' => 'col', 'COL.COLO4_31074' => 'col', 'COL.COLO4_31465' => 'col', 'COL.COLO4_36438' => 'col', 'COL.COLO4_36439' => 'col', 'Cpa.g.c38781' => 'cpa', 'Cpa.g.sc128.12' => 'cpa', 'Cpa.g.sc166.7' => 'cpa', 'Cpa.g.sc166.8' => 'cpa', 'Cpa.g.sc20.111' => 'cpa', 'Cpa.g.sc27.31' => 'cpa', 'Cpa.g.sc64.36' => 'cpa', 'Cpa.g.sc64.37' => 'cpa', 'Cpa.g.sc66.49' => 'cpa', 'Cpa.g.sc80.64' => 'cpa', 'CsaV3_1G012320' => 'csa', 'CsaV3_2G008480' => 'csa', 'CsaV3_2G033450' => 'csa', 'CsaV3_3G044830' => 'csa', 'CsaV3_4G033710' => 'csa', 'CsaV3_6G051730' => 'csa', 'CsaV3_7G025350' => 'csa', 'CSS0001067' => 'camsi', 'CSS0005996' => 'camsi', 'CSS0006590' => 'camsi', 'CSS0009673' => 'camsi', 'CSS0010201' => 'camsi', 'CSS0010549' => 'camsi', 'CSS0011364' => 'camsi', 'CSS0014473' => 'camsi', 'CSS0014961' => 'camsi', 'CSS0020191' => 'camsi', 'CSS0021165' => 'camsi', 'CSS0022306' => 'camsi', 'CSS0030591' => 'camsi', 'CSS0030696' => 'camsi', 'CSS0032653' => 'camsi', 'CSS0037487' => 'camsi', 'CSS0041102' => 'camsi', 'CSS0041261' => 'camsi', 'CSS0046246' => 'camsi', 'CSS0049256' => 'camsi', 'DCAR_004075' => 'dca', 'DCAR_011538' => 'dca', 'DCAR_019553' => 'dca', 'DCAR_020952' => 'dca', 'DCAR_021739' => 'dca', 'DCAR_027407' => 'dca', 'DCAR_027913' => 'dca', 'DCAR_028066' => 'dca', 'Dinv05899' => 'din', 'Dinv07563' => 'din', 'Dinv08010' => 'din', 'Dinv14125' => 'din', 'Dinv20172' => 'din', 'Dinv30743' => 'din', 'Dinv31229' => 'din', 'Dinv34162' => 'din', 'Dinv36028' => 'din', 'Dinv39368' => 'din', 'Dinv40565' => 'din', 'Dinv41706' => 'din', 'Duzib052G0089' => 'dzi', 'Duzib116G0641' => 'dzi', 'Duzib132G0069' => 'dzi', 'Duzib132G1219' => 'dzi', 'Duzib147G0278' => 'dzi', 'Duzib160G0480' => 'dzi', 'Duzib170G0661' => 'dzi', 'Duzib177G0591' => 'dzi', 'Duzib187G1353' => 'dzi', 'Duzib192G0858' => 'dzi', 'Duzib192G0883' => 'dzi', 'Duzib213G0506' => 'dzi', 'Duzib235G0289' => 'dzi', 'Duzib251G0422' => 'dzi', 'ECA232G3898' => 'eca', 'ECA233G5950' => 'eca', 'ECA234G1699' => 'eca', 'ECA234G2421' => 'eca', 'ECA236G0426' => 'eca', 'ECA236G4331' => 'eca', 'ECA248G2573' => 'eca', 'EL10Ac1g00077' => 'bvu', 'EL10Ac1g01746' => 'bvu', 'EL10Ac2g03464' => 'bvu', 'EL10Ac4g08176' => 'bvu', 'EL10Ac7g17521' => 'bvu', 'EL10Ac8g20386' => 'bvu', 'EL10Ac9g21343' => 'bvu', 'EL10Ac9g22688' => 'bvu', 'Eucgr.B03434' => 'egr', 'Eucgr.D00618' => 'egr', 'Eucgr.E02395' => 'egr', 'Eucgr.F01129' => 'egr', 'Eucgr.F02622' => 'egr', 'Eucgr.F04207' => 'egr', 'FAN01G0570' => 'fan', 'FAN03G3351' => 'fan', 'FAN06G3702' => 'fan', 'FAN07G2149' => 'fan', 'FAN10G3758' => 'fan', 'FAN11G1170' => 'fan', 'FAN11G2050' => 'fan', 'FAN11G2724' => 'fan', 'FAN12G1700' => 'fan', 'FAN12G2028' => 'fan', 'FAN15G1160' => 'fan', 'FAN15G3063' => 'fan', 'FAN16G2540' => 'fan', 'FAN16G3077' => 'fan', 'FAN16G3624' => 'fan', 'FAN17G0221' => 'fan', 'FAN20G2492' => 'fan', 'FAN20G2905' => 'fan', 'FAN21G0548' => 'fan', 'FAN21G1300' => 'fan', 'FAN22G0077' => 'fan', 'FAN22G1315' => 'fan', 'FAN24G1280' => 'fan', 'FAN24G1445' => 'fan', 'FAN24G3527' => 'fan', 'FAN25G0464' => 'fan', 'FAN25G2885' => 'fan', 'FAN25G3270' => 'fan', 'FAN27G1101' => 'fan', 'FAN27G2846' => 'fan', 'FAN27G3524' => 'fan', 'FvH4_2g11770' => 'fve', 'FvH4_2g15630' => 'fve', 'FvH4_3g05570' => 'fve', 'FvH4_3g09110' => 'fve', 'FvH4_3g19940' => 'fve', 'FvH4_4g04821' => 'fve', 'FvH4_4g31480' => 'fve', 'FvH4_7g01740' => 'fve', 'Glyma.05G130400' => 'gma', 'Glyma.05G156400' => 'gma', 'Glyma.07G197000' => 'gma', 'Glyma.08G085151' => 'gma', 'Glyma.08G114500' => 'gma', 'Glyma.08G300400' => 'gma', 'Glyma.10G215800' => 'gma', 'Glyma.12G224400' => 'gma', 'Glyma.13G179300' => 'gma', 'Glyma.13G218151' => 'gma', 'Glyma.13G238800' => 'gma', 'Glyma.13G276900' => 'gma', 'Glyma.14G078200' => 'gma', 'Glyma.15G074500' => 'gma', 'Glyma.15G094100' => 'gma', 'Glyma.17G247200' => 'gma', 'Glyma.18G120100' => 'gma', 'Glyma.20G176000' => 'gma', 'Gohir.A01G063600' => 'ghi', 'Gohir.A01G170301' => 'ghi', 'Gohir.A02G060500' => 'ghi', 'Gohir.A05G133850' => 'ghi', 'Gohir.A05G161400' => 'ghi', 'Gohir.A06G012900' => 'ghi', 'Gohir.A06G035901' => 'ghi', 'Gohir.A06G127100' => 'ghi', 'Gohir.A06G210500' => 'ghi', 'Gohir.A08G008650' => 'ghi', 'Gohir.A09G072700' => 'ghi', 'Gohir.A09G088301' => 'ghi', 'Gohir.A10G040600' => 'ghi', 'Gohir.A12G036300' => 'ghi', 'Gohir.A12G143350' => 'ghi', 'Gohir.A12G165500' => 'ghi', 'Gohir.A13G145700' => 'ghi', 'Gohir.D01G050000' => 'ghi', 'Gohir.D01G051366' => 'ghi', 'Gohir.D01G161350' => 'ghi', 'Gohir.D02G065900' => 'ghi', 'Gohir.D05G164200' => 'ghi', 'Gohir.D05G355500' => 'ghi', 'Gohir.D06G010400' => 'ghi', 'Gohir.D06G111250' => 'ghi', 'Gohir.D06G132000' => 'ghi', 'Gohir.D06G210500' => 'ghi', 'Gohir.D07G165675' => 'ghi', 'Gohir.D08G062240' => 'ghi', 'Gohir.D08G086101' => 'ghi', 'Gohir.D08G138060' => 'ghi', 'Gohir.D09G072300' => 'ghi', 'Gohir.D10G041400' => 'ghi', 'Gohir.D11G191020' => 'ghi', 'Gohir.D11G212066' => 'ghi', 'Gohir.D12G036300' => 'ghi', 'Gohir.D12G168600' => 'ghi', 'Gohir.D13G150600' => 'ghi', 'Gorai.001G057300' => 'gra', 'Gorai.002G069900' => 'gra', 'Gorai.002G200000' => 'gra', 'Gorai.003G067600' => 'gra', 'Gorai.005G074800' => 'gra', 'Gorai.006G087300' => 'gra', 'Gorai.008G037500' => 'gra', 'Gorai.008G181400' => 'gra', 'Gorai.009G169400' => 'gra', 'Gorai.009G387900' => 'gra', 'Gorai.010G013300' => 'gra', 'Gorai.010G153800' => 'gra', 'Gorai.010G255800' => 'gra', 'Gorai.011G043700' => 'gra', 'Gorai.011G198900' => 'gra', 'Gorai.013G168400' => 'gra', 'GSVIVG01005212001' => 'vvi', 'GSVIVG01006163001' => 'vvi', 'GSVIVG01009625001' => 'vvi', 'GSVIVG01014338001' => 'vvi', 'GSVIVG01020005001' => 'vvi', 'GSVIVG01021450001' => 'vvi', 'GSVIVG01023975001' => 'vvi', 'GSVIVG01034490001' => 'vvi', 'HanXRQChr04g0112071' => 'han', 'HanXRQChr05g0131151' => 'han', 'HanXRQChr09g0262371' => 'han', 'HanXRQChr09g0268401' => 'han', 'HanXRQChr10g0279241' => 'han', 'HanXRQChr10g0297961' => 'han', 'HanXRQChr11g0326231' => 'han', 'HanXRQChr11g0328471' => 'han', 'HanXRQChr16g0507941' => 'han', 'HanXRQChr17g0560211' => 'han', 'Haze_02108' => 'cav', 'Haze_02428' => 'cav', 'Haze_05593' => 'cav', 'Haze_06448' => 'cav', 'Haze_09427' => 'cav', 'Haze_12022' => 'cav', 'Haze_17612' => 'cav', 'Haze_17928' => 'cav', 'Hma1.2p1_0032F.1_g019250' => 'hma', 'Hma1.2p1_0163F.1_g072690' => 'hma', 'Hma1.2p1_0265F.1_g106710' => 'hma', 'Hma1.2p1_0286F.1_g113970' => 'hma', 'Hma1.2p1_0363F.1_g136640' => 'hma', 'Hma1.2p1_0584F.1_g183470' => 'hma', 'Hma1.2p1_0885F.1_g232570' => 'hma', 'HPP92_006022' => 'vpl', 'HPP92_007320' => 'vpl', 'HPP92_011521' => 'vpl', 'HPP92_019387' => 'vpl', 'HPP92_024038' => 'vpl', 'Hund05891' => 'sun', 'Hund06450' => 'sun', 'Hund12053' => 'sun', 'Hund16800' => 'sun', 'Hund21222' => 'sun', 'Hund22896' => 'sun', 'Hund23746' => 'sun', 'Hund27083' => 'sun', 'Lalb_Chr02g0141831' => 'lal', 'Lalb_Chr02g0141841' => 'lal', 'Lalb_Chr05g0220411' => 'lal', 'Lalb_Chr06g0162081' => 'lal', 'Lalb_Chr09g0327651' => 'lal', 'Lalb_Chr13g0295051' => 'lal', 'Lalb_Chr15g0086801' => 'lal', 'Lalb_Chr16g0383781' => 'lal', 'Lalb_Chr16g0383791' => 'lal', 'Lalb_Chr18g0055441' => 'lal', 'Lalb_Chr18g0059611' => 'lal', 'Lalb_Chr20g0109661' => 'lal', 'Lalb_Chr20g0109831' => 'lal', 'Lalb_Chr20g0121871' => 'lal', 'Lalb_Chr22g0355361' => 'lal', 'Lalb_Chr25g0286371' => 'lal', 'Lj1A1187G43' => 'lonja', 'Lj1A1205T50' => 'lonja', 'Lj1A800G33' => 'lonja', 'Lj1C1187T7' => 'lonja', 'Lj1C843T11' => 'lonja', 'Lj1g0010940' => 'lja', 'Lj2A288T69' => 'lonja', 'Lj3g0024276' => 'lja', 'Lj4A47T76' => 'lonja', 'Lj4g0005805' => 'lja', 'Lj4g0006097' => 'lja', 'Lj4g0008528' => 'lja', 'Lj4g0024907' => 'lja', 'Lj5g0012472' => 'lja', 'Lj5g0018648' => 'lja', 'Lj6C789G1' => 'lonja', 'Lj6g0004000' => 'lja', 'Lj7A292G67' => 'lonja', 'Lj7A292T64' => 'lonja', 'Lj9A400T58' => 'lonja', 'Lsat_1_v5_gn_1_126181' => 'lsa', 'Lsat_1_v5_gn_4_123041' => 'lsa', 'Lsat_1_v5_gn_4_133620' => 'lsa', 'Lsat_1_v5_gn_4_53221' => 'lsa', 'Lsat_1_v5_gn_4_71961' => 'lsa', 'Lsat_1_v5_gn_7_105241' => 'lsa', 'Lsat_1_v5_gn_7_21361' => 'lsa', 'Lsat_1_v5_gn_7_28860' => 'lsa', 'Lsat_1_v5_gn_7_31260' => 'lsa', 'Lsat_1_v5_gn_8_52801' => 'lsa', 'Manes.02G191400' => 'mes', 'Manes.03G110100' => 'mes', 'Manes.04G071100' => 'mes', 'Manes.05G100500' => 'mes', 'Manes.05G164700' => 'mes', 'Manes.15G087000' => 'mes', 'Manes.15G121500' => 'mes', 'Manes.16G028300' => 'mes', 'Manes.17G046100' => 'mes', 'Manes.17G069800' => 'mes', 'Manes.18G100500' => 'mes', 'Mapoly0002s0109' => 'mpo', 'Mapoly0024s0007' => 'mpo', 'Mapoly0089s0032' => 'mpo', 'MBI04_g42241_MAGBIO' => 'mbi', 'MBI05_g11988_MAGBIO' => 'mbi', 'MBI05_g35452_MAGBIO' => 'mbi', 'MBI07_g30179_MAGBIO' => 'mbi', 'MBI07_g35859_MAGBIO' => 'mbi', 'MBI07_g35860_MAGBIO' => 'mbi', 'MBI07_g37166_MAGBIO' => 'mbi', 'MBI08_g18172_MAGBIO' => 'mbi', 'MBI09_g08441_MAGBIO' => 'mbi', 'MBI13_g01676_MAGBIO' => 'mbi', 'MBI14_g42955_MAGBIO' => 'mbi', 'MBI16_g13161_MAGBIO' => 'mbi', 'MBI17_g27204_MAGBIO' => 'mbi', 'MBI19_g21595_MAGBIO' => 'mbi', 'MD00G1148400' => 'mdo', 'MD02G1301200' => 'mdo', 'MD03G1227800' => 'mdo', 'MD05G1041100' => 'mdo', 'MD05G1124800' => 'mdo', 'MD05G1284000' => 'mdo', 'MD05G1338800' => 'mdo', 'MD05G1338900' => 'mdo', 'MD07G1022800' => 'mdo', 'MD10G1047500' => 'mdo', 'MD10G1127500' => 'mdo', 'MD10G1262300' => 'mdo', 'MD10G1293800' => 'mdo', 'MD16G1074300' => 'mdo', 'Medtr1g021670' => 'mtr', 'Medtr1g096320' => 'mtr', 'Medtr2g013690' => 'mtr', 'Medtr2g019450' => 'mtr', 'Medtr2g085170' => 'mtr', 'Medtr4g088785' => 'mtr', 'Medtr8g055930' => 'mtr', 'Medtr8g085850' => 'mtr', 'MELO3C002605.2' => 'cme', 'MELO3C003891.2' => 'cme', 'MELO3C004012.2' => 'cme', 'MELO3C007134.2' => 'cme', 'MELO3C008118.2' => 'cme', 'MELO3C016700.2' => 'cme', 'MELO3C024127.2' => 'cme', 'MELO3C033361.2' => 'cme', 'MELO3C033362.2' => 'cme', 'Migut.C00430' => 'egut', 'Migut.C01246' => 'egut', 'Migut.E00101' => 'egut', 'Migut.H01486' => 'egut', 'Migut.H01939' => 'egut', 'Migut.K00360' => 'egut', 'Migut.M00910' => 'egut', 'Migut.M01139' => 'egut', 'Migut.N02677' => 'egut', 'MSTRG.13252' => 'ama', 'MSTRG.14701' => 'ama', 'MSTRG.1521' => 'ama', 'MSTRG.15884' => 'ama', 'MSTRG.16242' => 'ama', 'MSTRG.22285' => 'ama', 'MSTRG.22444' => 'ama', 'MSTRG.2349' => 'ama', 'MSTRG.26308' => 'ama', 'MSTRG.28296' => 'ama', 'MSTRG.9895' => 'ama', 'Nitab4.5_0000110g0060' => 'nta', 'Nitab4.5_0000420g0130' => 'nta', 'Nitab4.5_0000422g0030' => 'nta', 'Nitab4.5_0000560g0180' => 'nta', 'Nitab4.5_0000703g0100' => 'nta', 'Nitab4.5_0000786g0200' => 'nta', 'Nitab4.5_0001336g0020' => 'nta', 'Nitab4.5_0001796g0030' => 'nta', 'Nitab4.5_0003348g0060' => 'nta', 'Nitab4.5_0003698g0040' => 'nta', 'Nitab4.5_0003942g0090' => 'nta', 'Nitab4.5_0004775g0070' => 'nta', 'Nitab4.5_0004864g0030' => 'nta', 'Nitab4.5_0005615g0020' => 'nta', 'Nitab4.5_0009288g0030' => 'nta', 'Nitab4.5_0009341g0010' => 'nta', 'Nitab4.5_0009535g0010' => 'nta', 'Nn1g03995' => 'nnu', 'Nn1g04100' => 'nnu', 'Nn1g06530' => 'nnu', 'Nn3g16404' => 'nnu', 'Nn3g17212' => 'nnu', 'Nn3g20776' => 'nnu', 'Nn3g21923' => 'nnu', 'Nn5g27737' => 'nnu', 'Nn5g29461' => 'nnu', 'Nn7g38355' => 'nnu', 'Nn8g39873' => 'nnu', 'Oeu000548.2' => 'oeu', 'Oeu004672.1' => 'oeu', 'Oeu015605.2' => 'oeu', 'Oeu016092.1' => 'oeu', 'Oeu017879.3' => 'oeu', 'Oeu024910.1' => 'oeu', 'Oeu028965.1' => 'oeu', 'Oeu031269.1' => 'oeu', 'Oeu031270.1' => 'oeu', 'Oeu032535.1' => 'oeu', 'Oeu034151.1' => 'oeu', 'Oeu034152.1' => 'oeu', 'Oeu034588.2' => 'oeu', 'Oeu050846.1' => 'oeu', 'Oeu050849.2' => 'oeu', 'Oeu051063.2' => 'oeu', 'Oeu052368.1' => 'oeu', 'Oeu052370.1' => 'oeu', 'Os01g0210400' => 'osa', 'Os01g0304300' => 'osa', 'Os01g0749100' => 'osa', 'Os02g0745800' => 'osa', 'Os03g0769050' => 'osa', 'Os05g0531500' => 'osa', 'Os06g0724300' => 'osa', 'Os11g0198100' => 'osa', 'Peaxi162Scf00069g01425' => 'pax', 'Peaxi162Scf00280g00811' => 'pax', 'Peaxi162Scf00310g00615' => 'pax', 'Peaxi162Scf00362g00542' => 'pax', 'Peaxi162Scf00461g00310' => 'pax', 'Peaxi162Scf00530g00118' => 'pax', 'Peaxi162Scf00541g00057' => 'pax', 'Peaxi162Scf00661g00017' => 'pax', 'Peaxi162Scf00926g00027' => 'pax', 'Peaxi162Scf01064g00263' => 'pax', 'Peaxi162Scf01211g00135' => 'pax', 'PGR004G2336' => 'pgr', 'PGR042G0327' => 'pgr', 'PGR042G1957' => 'pgr', 'PGR042G2003' => 'pgr', 'PGR042G3929' => 'pgr', 'PGR083G1137' => 'pgr', 'PGR083G1364' => 'pgr', 'PGSC0003DMG400003381' => 'stu', 'PGSC0003DMG400003417' => 'stu', 'PGSC0003DMG400008981' => 'stu', 'PGSC0003DMG400012417' => 'stu', 'PGSC0003DMG400012823' => 'stu', 'PGSC0003DMG400016885' => 'stu', 'PGSC0003DMG400022812' => 'stu', 'PGSC0003DMG400029726' => 'stu', 'PGSC0003DMG401009243' => 'stu', 'PGSC0003DMG401031505' => 'stu', 'PGSC0003DMG402031505' => 'stu', 'Phvul.001G017600' => 'pvu', 'Phvul.002G193500' => 'pvu', 'Phvul.002G228900' => 'pvu', 'Phvul.002G236800' => 'pvu', 'Phvul.003G049500' => 'pvu', 'Phvul.005G072000' => 'pvu', 'Phvul.006G164800' => 'pvu', 'Phvul.006G185100' => 'pvu', 'Phvul.007G090000' => 'pvu', 'Potri.001G399800' => 'ptr', 'Potri.002G149900' => 'ptr', 'Potri.004G044100' => 'ptr', 'Potri.004G177600' => 'ptr', 'Potri.009G138000' => 'ptr', 'Potri.010G094000' => 'ptr', 'Potri.011G053000' => 'ptr', 'Potri.011G119300' => 'ptr', 'Potri.013G113700' => 'ptr', 'Potri.018G107800' => 'ptr', 'Potri.019G084100' => 'ptr', 'Pp3c14_23720' => 'ppa', 'Pp3c16_6340' => 'ppa', 'Pp3c23_13420' => 'ppa', 'Pp3c24_2740' => 'ppa', 'Pp3c25_860' => 'ppa', 'Pp3c8_21750' => 'ppa', 'Prupe.1G273000' => 'ppe', 'Prupe.1G273700' => 'ppe', 'Prupe.1G274100' => 'ppe', 'Prupe.2G023300' => 'ppe', 'Prupe.4G048000' => 'ppe', 'Prupe.4G080400' => 'ppe', 'Prupe.4G181200' => 'ppe', 'Prupe.8G056900' => 'ppe', 'Prupe.8G168700' => 'ppe', 'Psat1g189080' => 'psa', 'Psat1g204760' => 'psa', 'Psat4g175560' => 'psa', 'Psat4g177720' => 'psa', 'Psat5g244240' => 'psa', 'Psat6g010720' => 'psa', 'Psat6g187200' => 'psa', 'Psat7g072040' => 'psa', 'PSO017G3501' => 'pso', 'PSO063G2148' => 'pso', 'PSO063G5608' => 'pso', 'PSO210G6392' => 'pso', 'PSO541G2319' => 'pso', 'PSO541G2836' => 'pso', 'PSO541G4012' => 'pso', 'PSO541G6253' => 'pso', 'PSO675G0580' => 'pso', 'PSO675G0856' => 'pso', 'PSO675G5635' => 'pso', 'PSO675G9157' => 'pso', 'PSO832G1660' => 'pso', 'PSO832G1969' => 'pso', 'QL02p007186' => 'qlo', 'QL02p033904' => 'qlo', 'QL03p064391' => 'qlo', 'QL05p040593' => 'qlo', 'QL05p058242' => 'qlo', 'QL08p021825' => 'qlo', 'QL11p004981' => 'qlo', 'RcHm_v2.0_Chr1g0318301' => 'rch', 'RcHm_v2.0_Chr4g0418501' => 'rch', 'RcHm_v2.0_Chr4g0439971' => 'rch', 'RcHm_v2.0_Chr5g0008541' => 'rch', 'RcHm_v2.0_Chr5g0014101' => 'rch', 'RcHm_v2.0_Chr5g0014131' => 'rch', 'RcHm_v2.0_Chr5g0033621' => 'rch', 'RcHm_v2.0_Chr6g0272041' => 'rch', 'RcHm_v2.0_Chr6g0278831' => 'rch', 'Rhsim02G0130400' => 'rsi', 'Rhsim02G0171100' => 'rsi', 'Rhsim05G0053000' => 'rsi', 'Rhsim05G0053100' => 'rsi', 'Rhsim06G0096500' => 'rsi', 'Rhsim06G0096600' => 'rsi', 'Rhsim06G0199100' => 'rsi', 'Rhsim12G0062300' => 'rsi', 'Rhsim12G0062800' => 'rsi', 'Sabra02G0118600' => 'sbr', 'Sabra04G0027300' => 'sbr', 'Sabra04G0119500' => 'sbr', 'Sabra08G0112500' => 'sbr', 'Sabra11G0036800' => 'sbr', 'Sabra11G0103800' => 'sbr', 'Sabra13G0096300' => 'sbr', 'Sabra16G0262300' => 'sbr', 'Sabra18G0091700' => 'sbr', 'Sabra19G0095400' => 'sbr', 'SalBow6G3080' => 'sbo', 'SalBow7G1157' => 'sbo', 'SalBow7G2123' => 'sbo', 'SalBow7G2285' => 'sbo', 'SalBow7G3537' => 'sbo', 'SalBow8G2947' => 'sbo', 'SalBow8G4463' => 'sbo', 'SalBow8G5466' => 'sbo', 'Sc01g0001750' => 'sci', 'Sc02g0006640' => 'sci', 'Sc02g0006670' => 'sci', 'Sc04g0008220' => 'sci', 'Sc05g0006190' => 'sci', 'Sc08g0002760' => 'sci', 'Sc17g0006170' => 'sci', 'Sc22g0002050' => 'sci', 'Sc23g0001190' => 'sci', 'Sc24g0000980' => 'sci', 'Sed0006245' => 'sed', 'Sed0007543' => 'sed', 'Sed0009411' => 'sed', 'Sed0010765' => 'sed', 'Sed0012944' => 'sed', 'Sed0014682' => 'sed', 'Sed0016174' => 'sed', 'Sed0016796' => 'sed', 'Sed0020317' => 'sed', 'Sed0021467' => 'sed', 'SEGI_01316' => 'sgi', 'SEGI_03374' => 'sgi', 'SEGI_16265' => 'sgi', 'SEGI_18569' => 'sgi', 'SEGI_20351' => 'sgi', 'SEGI_26395' => 'sgi', 'SEGI_29469' => 'sgi', 'SEGI_34771' => 'sgi', 'SEGI_36769' => 'sgi', 'SEGI_37139' => 'sgi', 'SGA_v2.0_scaffold100G29687' => 'sas', 'SGA_v2.0_scaffold118G32472' => 'sas', 'SGA_v2.0_scaffold14G07051' => 'sas', 'SGA_v2.0_scaffold183G39845' => 'sas', 'SGA_v2.0_scaffold1G00174' => 'sas', 'SGA_v2.0_scaffold22G09714' => 'sas', 'SGA_v2.0_scaffold333G48992' => 'sas', 'SGA_v2.0_scaffold46G17491' => 'sas', 'SGA_v2.0_scaffold49G18294' => 'sas', 'SGA_v2.0_scaffold63G21658' => 'sas', 'SHI01741' => 'shi', 'SHI05771' => 'shi', 'SHI18077' => 'shi', 'SHI20525' => 'shi', 'SHI20527' => 'shi', 'SHI20528' => 'shi', 'SMO172G0185' => 'smo', 'SMO198G0020' => 'smo', 'SMO351G0006' => 'smo', 'SMO356G0118' => 'smo', 'SMO358G0296' => 'smo', 'SMO367G0079' => 'smo', 'SMO367G1277' => 'smo', 'Solyc01g014220.3' => 'sly', 'Solyc01g111770.2' => 'sly', 'Solyc02g078180.3' => 'sly', 'Solyc03g006430.3' => 'sly', 'Solyc03g006456.1' => 'sly', 'Solyc03g079860.2' => 'sly', 'Solyc04g079770.3' => 'sly', 'Solyc05g007430.4' => 'sly', 'Solyc07g063150.3' => 'sly', 'Solyc08g016620.3' => 'sly', 'Solyc09g057590.3' => 'sly', 'Solyc09g057600.1' => 'sly', 'Solyc10g009050.3' => 'sly', 'Solyc11g017420.2' => 'sly', 'Sopen01g053810' => 'spe', 'Sopen02g023040' => 'spe', 'Sopen03g002440' => 'spe', 'Sopen04g033350' => 'spe', 'Sopen05g003310' => 'spe', 'Sopen07g004050' => 'spe', 'Sopen07g031340' => 'spe', 'Sopen08g006990' => 'spe', 'Sopen10g004830' => 'spe', 'Sopen11g009370' => 'spe', 'Sp1g24450' => 'spa', 'Sp1g29670' => 'spa', 'Sp1g39600' => 'spa', 'Sp2g11080' => 'spa', 'Sp2g13970' => 'spa', 'Sp4g16130' => 'spa', 'Sp6g13080' => 'spa', 'Sp7g37270' => 'spa', 'TAR371G0065' => 'tar', 'TAR376G0340' => 'tar', 'TAR376G0435' => 'tar', 'TAR381G0002' => 'tar', 'TAR381G1236' => 'tar', 'TAR624G0055' => 'tar', 'TAR624G0324' => 'tar', 'TAR624G0696' => 'tar', 'TAR624G0906' => 'tar', 'TAR625G0107' => 'tar', 'TAR626G0015' => 'tar', 'TAR626G1356' => 'tar', 'TAR627G0888' => 'tar', 'TAR628G0399' => 'tar', 'TAR628G1327' => 'tar', 'TAR629G2831' => 'tar', 'TAR629G2874' => 'tar', 'TAR633G1432' => 'tar', 'TAR633G2771' => 'tar', 'THA.LOC104803394' => 'tha', 'THA.LOC104805153' => 'tha', 'THA.LOC104806784' => 'tha', 'THA.LOC104810473' => 'tha', 'THA.LOC104813100' => 'tha', 'THA.LOC104814215' => 'tha', 'THA.LOC104815554' => 'tha', 'THA.LOC104820544' => 'tha', 'THA.LOC104824754' => 'tha', 'THA.LOC104827717' => 'tha', 'Thecc.02G031400' => 'tca', 'Thecc.02G055900' => 'tca', 'Thecc.02G350800' => 'tca', 'Thecc.06G150900' => 'tca', 'Thecc.06G186600' => 'tca', 'Thecc.07G089600' => 'tca', 'Thecc.08G020400' => 'tca', 'Thecc.08G182100' => 'tca', 'Thhalv10000873m.g' => 'esa', 'Thhalv10004185m.g' => 'esa', 'Thhalv10006981m.g' => 'esa', 'Thhalv10007204m.g' => 'esa', 'Thhalv10011374m.g' => 'esa', 'Thhalv10013482m.g' => 'esa', 'Thhalv10017801m.g' => 'esa', 'Thhalv10024983m.g' => 'esa', 'TPR.G12072' => 'tpr', 'TPR.G15769' => 'tpr', 'TPR.G16504' => 'tpr', 'TPR.G16506' => 'tpr', 'TPR.G24345' => 'tpr', 'TPR.G26666' => 'tpr', 'TPR.G27320' => 'tpr', 'TPR.G31819' => 'tpr', 'TPR.G38879' => 'tpr', 'TPR.G39015' => 'tpr', 'TPR.G8819' => 'tpr', 'TWI09G0924' => 'twi', 'TWI12G0811' => 'twi', 'TWI12G1294' => 'twi', 'TWI31G0150' => 'twi', 'TWI36G1262' => 'twi', 'TWI38G1287' => 'twi', 'TWI38G1633' => 'twi', 'TWI38G1982' => 'twi', 'TWI39G0116' => 'twi', 'TWI60G1011' => 'twi', 'TWI63G0171' => 'twi', 'TWI73G0839' => 'twi', 'TWI79G1511' => 'twi', 'unitig_0.g915' => 'ugi', 'unitig_0.g916' => 'ugi', 'unitig_21.g20219' => 'ugi', 'unitig_21.g20416' => 'ugi', 'unitig_578.g16132' => 'ugi', 'unitig_578.g16718' => 'ugi', 'unitig_62.g23481' => 'ugi', 'unitig_744.g24535' => 'ugi', 'unitig_749.g13525' => 'ugi', 'vmacro01248' => 'vma', 'vmacro02290' => 'vma', 'vmacro10946' => 'vma', 'vmacro11865' => 'vma', 'vmacro12493' => 'vma', 'vmacro17322' => 'vma', 'vmacro21599' => 'vma', 'vmacro23041' => 'vma', 'VMungo0251G0004' => 'vmu', 'VMungo0251G2639' => 'vmu', 'VMungo0251G2967' => 'vmu', 'VMungo0540G0864' => 'vmu', 'VMungo0540G1569' => 'vmu', 'VMungo0647G0317' => 'vmu', 'VMungo0720G1373' => 'vmu', 'VMungo0720G1508' => 'vmu', 'VMungo1080G0485' => 'vmu', 'VMungo1215G3177' => 'vmu', 'Zm00001eb112600' => 'zma', 'Zm00001eb120220' => 'zma', 'Zm00001eb153240' => 'zma', 'Zm00001eb168880' => 'zma', 'Zm00001eb213920' => 'zma', 'Zm00001eb228280' => 'zma', 'Zm00001eb254580' => 'zma', 'Zm00001eb272180' => 'zma', 'Zm00001eb293190' => 'zma', 'Zm00001eb322930' => 'zma', 'Zm00001eb353360' => 'zma', 'Zm00001eb353390' => 'zma', 'Zm00001eb353430' => 'zma', 'Zm00001eb353440' => 'zma', 'Zm00001eb353780' => 'zma' ) $gf_id = 'HOM05D000499' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000499' ) $data_identifier = 'HOM05D000499' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 29, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 12, 'amhyb' => (int) 8, 'aly' => (int) 12, 'aox' => (int) 9, 'arhy' => (int) 26, 'ath' => (int) 8, 'atr' => (int) 7, 'acertr' => (int) 10, 'cqu' => (int) 15, 'bca' => (int) 29, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 11, 'cansat' => (int) 8, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 9, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 8, 'cpa' => (int) 10, 'csa' => (int) 7, 'camsi' => (int) 20, 'dca' => (int) 8, 'din' => (int) 12, 'dzi' => (int) 14, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 6, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 38, 'gra' => (int) 16, 'vvi' => (int) 8, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 5, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 11, 'lja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 11, 'mpo' => (int) 3, 'mbi' => (int) 14, 'mdo' => (int) 14, 'mtr' => (int) 8, 'cme' => (int) 9, 'egut' => (int) 9, 'ama' => (int) 11, 'nta' => (int) 17, 'nnu' => (int) 11, 'oeu' => (int) 18, 'osa' => (int) 8, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 6, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 9, 'rsi' => (int) 9, 'sbr' => (int) 10, 'sbo' => (int) 8, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 10, 'sas' => (int) 10, 'shi' => (int) 6, 'smo' => (int) 7, 'sly' => (int) 14, 'spe' => (int) 10, 'spa' => (int) 8, 'tar' => (int) 19, 'tha' => (int) 10, 'tca' => (int) 8, 'esa' => (int) 8, 'tpr' => (int) 11, 'twi' => (int) 13, 'ugi' => (int) 9, 'vma' => (int) 8, 'vmu' => (int) 10, 'zma' => (int) 15 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb353780' $species_info = array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ) $local_species = 'sun' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000499', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1066', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p29780' => 'bna', 'A02p33180' => 'bna', 'A03p16470' => 'bna', 'A03p66010' => 'bna', 'A04p25970' => 'bna', 'A06p01270' => 'bna', 'A06p46080' => 'bna', 'A07p11400' => 'bna', 'A08p01840' => 'bna', 'A08p08230' => 'bna', 'A08p25740' => 'bna', 'A09p32070' => 'bna', 'A09p37830' => 'bna', 'A09p42840' => 'bna', 'A09p42850' => 'bna', 'Aa31LG10G2060' => 'aar', 'Aa31LG2G7410' => 'aar', 'Aa31LG6G10200' => 'aar', 'Aa31LG6G16680' => 'aar', 'Aa31LG6G8470' => 'aar', 'Aa31LG9G12730' => 'aar', 'Aa31LG9G13680' => 'aar', 'Aa31LG9G14920' => 'aar', 'Aa31LG9G6650' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4977' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5467' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3254' => 'aag', 'Actinidia02578' => 'ach', 'Actinidia07693' => 'ach', 'Actinidia08413' => 'ach', 'Actinidia08414' => 'ach', 'Actinidia15289' => 'ach', 'Actinidia19871' => 'ach', 'Actinidia21475' => 'ach', 'Actinidia22576' => 'ach', 'Actinidia28327' => 'ach', 'Actinidia32491' => 'ach', 'Actinidia39463' => 'ach', 'Actinidia39571' => 'ach', 'Ah.01g013750' => 'amhyb', 'Ah.01g023210' => 'amhyb', 'Ah.04g164850' => 'amhyb', 'Ah.05g178060' => 'amhyb', 'Ah.07g204270' => 'amhyb', 'Ah.07g208480' => 'amhyb', 'Ah.09g237410' => 'amhyb', 'Ah.14g089460' => 'amhyb', 'AL1G41790' => 'aly', 'AL1G49050' => 'aly', 'AL1G53810' => 'aly', 'AL1G61400' => 'aly', 'AL4G18580' => 'aly', 'AL5G12510' => 'aly', 'AL5G12540' => 'aly', 'AL6G43230' => 'aly', 'AL7G10370' => 'aly', 'AL7G19250' => 'aly', 'AL8G12240' => 'aly', 'AL8G18540' => 'aly', 'Aqoxy1G02409' => 'aox', 'Aqoxy2G03993' => 'aox', 'Aqoxy3G03357' => 'aox', 'Aqoxy4G00785' => 'aox', 'Aqoxy5G02598' => 'aox', 'Aqoxy6G00132' => 'aox', 'Aqoxy7G01776' => 'aox', 'Aqoxy7G02316' => 'aox', 'Aqoxy7G03973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.12AFKW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B8730' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27IQR1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3F75VG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3RE0GA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41TCQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.527VTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FIR39' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5W8UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DA38EV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ63HS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H1I32C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HC27T5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4M8AP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7N3CZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9UVDZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LS1NQA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT1D4B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SKC4TM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCFV76' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF9Q1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQWD9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1ZM88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WE07RT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YCK7VH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJE6Q6' => 'arhy', 'AT1G28240' => 'ath', 'AT1G34550' => 'ath', 'AT1G53040' => 'ath', 'AT2G02910' => 'ath', 'AT4G09630' => 'ath', 'AT4G38500' => 'ath', 'AT5G42660' => 'ath', 'AT5G46220' => 'ath', 'ATR0152G026' => 'atr', 'ATR0564G343' => 'atr', 'ATR0706G151' => 'atr', 'ATR0733G207' => 'atr', 'ATR0751G234' => 'atr', 'ATR0807G048' => 'atr', 'ATR1091G084' => 'atr', 'Atru.chr10.1229' => 'acertr', 'Atru.chr10.1230' => 'acertr', 'Atru.chr10.1874' => 'acertr', 'Atru.chr11.1808' => 'acertr', 'Atru.chr13.1795' => 'acertr', 'Atru.chr13.570' => 'acertr', 'Atru.chr2.2608' => 'acertr', 'Atru.chr2.2609' => 'acertr', 'Atru.chr5.3428' => 'acertr', 'Atru.chr8.1171' => 'acertr', 'AUR62004651' => 'cqu', 'AUR62008675' => 'cqu', 'AUR62010014' => 'cqu', 'AUR62013004' => 'cqu', 'AUR62014825' => 'cqu', 'AUR62015015' => 'cqu', 'AUR62015151' => 'cqu', 'AUR62017020' => 'cqu', 'AUR62019422' => 'cqu', 'AUR62023570' => 'cqu', 'AUR62025571' => 'cqu', 'AUR62029098' => 'cqu', 'AUR62033863' => 'cqu', 'AUR62034296' => 'cqu', 'AUR62040075' => 'cqu', 'BcaB02g07334' => 'bca', 'BcaB02g10575' => 'bca', 'BcaB03g12119' => 'bca', 'BcaB03g12120' => 'bca', 'BcaB03g13945' => 'bca', 'BcaB04g17123' => 'bca', 'BcaB04g17867' => 'bca', 'BcaB04g19839' => 'bca', 'BcaB07g30317' => 'bca', 'BcaB07g32432' => 'bca', 'BcaB07g33362' => 'bca', 'BcaB08g36611' => 'bca', 'BcaC01g00028' => 'bca', 'BcaC01g01356' => 'bca', 'BcaC01g02034' => 'bca', 'BcaC01g06051' => 'bca', 'BcaC03g16839' => 'bca', 'BcaC03g17176' => 'bca', 'BcaC05g26829' => 'bca', 'BcaC06g31490' => 'bca', 'BcaC06g35344' => 'bca', 'BcaC06g36570' => 'bca', 'BcaC07g37537' => 'bca', 'BcaC08g43491' => 'bca', 'BcaC08g43773' => 'bca', 'BcaNung00234' => 'bca', 'BcaNung01982' => 'bca', 'BcaNung03707' => 'bca', 'BcaNung06454' => 'bca', 'BolC2t10762H' => 'bol', 'BolC2t11191H' => 'bol', 'BolC3t14322H' => 'bol', 'BolC3t19747H' => 'bol', 'BolC3t21425H' => 'bol', 'BolC4t27800H' => 'bol', 'BolC5t31423H' => 'bol', 'BolC6t35951H' => 'bol', 'BolC6t36282H' => 'bol', 'BolC7t40678H' => 'bol', 'BolC7t40679H' => 'bol', 'BolC7t42222H' => 'bol', 'BolC7t43492H' => 'bol', 'BolC7t46785H' => 'bol', 'BolC8t47853H' => 'bol', 'BolC9t56805H' => 'bol', 'BraA02t08000Z' => 'bra', 'BraA02t08341Z' => 'bra', 'BraA03t10936Z' => 'bra', 'BraA03t15657Z' => 'bra', 'BraA04t18100Z' => 'bra', 'BraA05t20523Z' => 'bra', 'BraA06t23353Z' => 'bra', 'BraA06t27473Z' => 'bra', 'BraA06t27769Z' => 'bra', 'BraA07t28928Z' => 'bra', 'BraA08t32236Z' => 'bra', 'BraA08t32841Z' => 'bra', 'BraA08t34524Z' => 'bra', 'BraA09t38742Z' => 'bra', 'BraA09t39295Z' => 'bra', 'C02p47180' => 'bna', 'C02p50990' => 'bna', 'C03p19360' => 'bna', 'C03p74950' => 'bna', 'C03p91000' => 'bna', 'C04p63260' => 'bna', 'C05p27050' => 'bna', 'C06p08750' => 'bna', 'C06p11490' => 'bna', 'C07p02820' => 'bna', 'C07p17180' => 'bna', 'C07p29440' => 'bna', 'C07p63730' => 'bna', 'C09p39260' => 'bna', 'CAN.G1164.34' => 'can', 'CAN.G1164.39' => 'can', 'CAN.G1530.3' => 'can', 'CAN.G162.61' => 'can', 'CAN.G176.6' => 'can', 'CAN.G289.49' => 'can', 'CAN.G370.21' => 'can', 'CAN.G370.22' => 'can', 'CAN.G371.117' => 'can', 'CAN.G58.37' => 'can', 'CAN.G588.98' => 'can', 'CANSAT21G2266' => 'cansat', 'CANSAT25G2799' => 'cansat', 'CANSAT35G0862' => 'cansat', 'CANSAT35G1704' => 'cansat', 'CANSAT35G1760' => 'cansat', 'CANSAT56G3971' => 'cansat', 'CANSAT56G4116' => 'cansat', 'CANSAT80G1259' => 'cansat', 'CARHR027730' => 'chi', 'CARHR033880' => 'chi', 'CARHR043270' => 'chi', 'CARHR145330' => 'chi', 'CARHR145340' => 'chi', 'CARHR175570' => 'chi', 'CARHR181570' => 'chi', 'CARHR258470' => 'chi', 'CARHR260490' => 'chi', 'CARHR294220' => 'chi', 'Carub.0001s2668' => 'cru', 'Carub.0001s3257' => 'cru', 'Carub.0001s4220' => 'cru', 'Carub.0005s0179' => 'cru', 'Carub.0006s2807' => 'cru', 'Carub.0007s0039' => 'cru', 'Carub.0008s0169' => 'cru', 'Carub.0008s0636' => 'cru', 'Ca_00338_v3' => 'car', 'Ca_00542_v3' => 'car', 'Ca_01844_v3' => 'car', 'Ca_10611_v3' => 'car', 'Ca_13326_v3' => 'car', 'Ca_17944_v3' => 'car', 'Ca_18546_v3' => 'car', 'Ca_24219_v3' => 'car', 'Ca_29972_v3' => 'car', 'CBR_g3681' => 'cbr', 'CBR_g40021' => 'cbr', 'Cc01_g08140' => 'ccan', 'Cc02_g13410' => 'ccan', 'Cc02_g37480' => 'ccan', 'Cc05_g12030' => 'ccan', 'Cc09_g03370' => 'ccan', 'Cc09_g10300' => 'ccan', 'Cc10_g03530' => 'ccan', 'Cc10_g11380' => 'ccan', 'CDE01G0176' => 'cde', 'CDE02G0675' => 'cde', 'CDE02G0942' => 'cde', 'CDE02G1153' => 'cde', 'CDE02G4177' => 'cde', 'CDE04G2117' => 'cde', 'CDE04G2736' => 'cde', 'CDE08G1161' => 'cde', 'CDE09G1238' => 'cde', 'Cfa000467' => 'cfa', 'Cfa000947' => 'cfa', 'Cfa004969' => 'cfa', 'Cfa005284' => 'cfa', 'Cfa008993' => 'cfa', 'Cfa018187' => 'cfa', 'Cfa018454' => 'cfa', 'Cfa020585' => 'cfa', 'Ciclev10000424m.g' => 'ccl', 'Ciclev10003605m.g' => 'ccl', 'Ciclev10007828m.g' => 'ccl', 'Ciclev10014620m.g' => 'ccl', 'Ciclev10015169m.g' => 'ccl', 'Ciclev10018291m.g' => 'ccl', 'Ciclev10028256m.g' => 'ccl', 'Ciclev10033822m.g' => 'ccl', 'CiPaw.05G060300' => 'cil', 'CiPaw.05G085000' => 'cil', 'CiPaw.06G083700' => 'cil', 'CiPaw.06G120300' => 'cil', 'CiPaw.09G060500' => 'cil', 'CiPaw.09G123800' => 'cil', 'CiPaw.11G169700' => 'cil', 'CiPaw.12G118300' => 'cil', 'CiPaw.15G071000' => 'cil', 'CiPaw.15G081900' => 'cil', 'ClCG01G024610' => 'cla', 'ClCG03G006070' => 'cla', 'ClCG05G019250' => 'cla', 'ClCG09G009500' => 'cla', 'ClCG11G008200' => 'cla', 'ClCG11G018080' => 'cla', 'COL.COLO4_17373' => 'col', 'COL.COLO4_22994' => 'col', 'COL.COLO4_26389' => 'col', 'COL.COLO4_27170' => 'col', 'COL.COLO4_31074' => 'col', 'COL.COLO4_31465' => 'col', 'COL.COLO4_36438' => 'col', 'COL.COLO4_36439' => 'col', 'Cpa.g.c38781' => 'cpa', 'Cpa.g.sc128.12' => 'cpa', 'Cpa.g.sc166.7' => 'cpa', 'Cpa.g.sc166.8' => 'cpa', 'Cpa.g.sc20.111' => 'cpa', 'Cpa.g.sc27.31' => 'cpa', 'Cpa.g.sc64.36' => 'cpa', 'Cpa.g.sc64.37' => 'cpa', 'Cpa.g.sc66.49' => 'cpa', 'Cpa.g.sc80.64' => 'cpa', 'CsaV3_1G012320' => 'csa', 'CsaV3_2G008480' => 'csa', 'CsaV3_2G033450' => 'csa', 'CsaV3_3G044830' => 'csa', 'CsaV3_4G033710' => 'csa', 'CsaV3_6G051730' => 'csa', 'CsaV3_7G025350' => 'csa', 'CSS0001067' => 'camsi', 'CSS0005996' => 'camsi', 'CSS0006590' => 'camsi', 'CSS0009673' => 'camsi', 'CSS0010201' => 'camsi', 'CSS0010549' => 'camsi', 'CSS0011364' => 'camsi', 'CSS0014473' => 'camsi', 'CSS0014961' => 'camsi', 'CSS0020191' => 'camsi', 'CSS0021165' => 'camsi', 'CSS0022306' => 'camsi', 'CSS0030591' => 'camsi', 'CSS0030696' => 'camsi', 'CSS0032653' => 'camsi', 'CSS0037487' => 'camsi', 'CSS0041102' => 'camsi', 'CSS0041261' => 'camsi', 'CSS0046246' => 'camsi', 'CSS0049256' => 'camsi', 'DCAR_004075' => 'dca', 'DCAR_011538' => 'dca', 'DCAR_019553' => 'dca', 'DCAR_020952' => 'dca', 'DCAR_021739' => 'dca', 'DCAR_027407' => 'dca', 'DCAR_027913' => 'dca', 'DCAR_028066' => 'dca', 'Dinv05899' => 'din', 'Dinv07563' => 'din', 'Dinv08010' => 'din', 'Dinv14125' => 'din', 'Dinv20172' => 'din', 'Dinv30743' => 'din', 'Dinv31229' => 'din', 'Dinv34162' => 'din', 'Dinv36028' => 'din', 'Dinv39368' => 'din', 'Dinv40565' => 'din', 'Dinv41706' => 'din', 'Duzib052G0089' => 'dzi', 'Duzib116G0641' => 'dzi', 'Duzib132G0069' => 'dzi', 'Duzib132G1219' => 'dzi', 'Duzib147G0278' => 'dzi', 'Duzib160G0480' => 'dzi', 'Duzib170G0661' => 'dzi', 'Duzib177G0591' => 'dzi', 'Duzib187G1353' => 'dzi', 'Duzib192G0858' => 'dzi', 'Duzib192G0883' => 'dzi', 'Duzib213G0506' => 'dzi', 'Duzib235G0289' => 'dzi', 'Duzib251G0422' => 'dzi', 'ECA232G3898' => 'eca', 'ECA233G5950' => 'eca', 'ECA234G1699' => 'eca', 'ECA234G2421' => 'eca', 'ECA236G0426' => 'eca', 'ECA236G4331' => 'eca', 'ECA248G2573' => 'eca', 'EL10Ac1g00077' => 'bvu', 'EL10Ac1g01746' => 'bvu', 'EL10Ac2g03464' => 'bvu', 'EL10Ac4g08176' => 'bvu', 'EL10Ac7g17521' => 'bvu', 'EL10Ac8g20386' => 'bvu', 'EL10Ac9g21343' => 'bvu', 'EL10Ac9g22688' => 'bvu', 'Eucgr.B03434' => 'egr', 'Eucgr.D00618' => 'egr', 'Eucgr.E02395' => 'egr', 'Eucgr.F01129' => 'egr', 'Eucgr.F02622' => 'egr', 'Eucgr.F04207' => 'egr', 'FAN01G0570' => 'fan', 'FAN03G3351' => 'fan', 'FAN06G3702' => 'fan', 'FAN07G2149' => 'fan', 'FAN10G3758' => 'fan', 'FAN11G1170' => 'fan', 'FAN11G2050' => 'fan', 'FAN11G2724' => 'fan', 'FAN12G1700' => 'fan', 'FAN12G2028' => 'fan', 'FAN15G1160' => 'fan', 'FAN15G3063' => 'fan', 'FAN16G2540' => 'fan', 'FAN16G3077' => 'fan', 'FAN16G3624' => 'fan', 'FAN17G0221' => 'fan', 'FAN20G2492' => 'fan', 'FAN20G2905' => 'fan', 'FAN21G0548' => 'fan', 'FAN21G1300' => 'fan', 'FAN22G0077' => 'fan', 'FAN22G1315' => 'fan', 'FAN24G1280' => 'fan', 'FAN24G1445' => 'fan', 'FAN24G3527' => 'fan', 'FAN25G0464' => 'fan', 'FAN25G2885' => 'fan', 'FAN25G3270' => 'fan', 'FAN27G1101' => 'fan', 'FAN27G2846' => 'fan', 'FAN27G3524' => 'fan', 'FvH4_2g11770' => 'fve', 'FvH4_2g15630' => 'fve', 'FvH4_3g05570' => 'fve', 'FvH4_3g09110' => 'fve', 'FvH4_3g19940' => 'fve', 'FvH4_4g04821' => 'fve', 'FvH4_4g31480' => 'fve', 'FvH4_7g01740' => 'fve', 'Glyma.05G130400' => 'gma', 'Glyma.05G156400' => 'gma', 'Glyma.07G197000' => 'gma', 'Glyma.08G085151' => 'gma', 'Glyma.08G114500' => 'gma', 'Glyma.08G300400' => 'gma', 'Glyma.10G215800' => 'gma', 'Glyma.12G224400' => 'gma', 'Glyma.13G179300' => 'gma', 'Glyma.13G218151' => 'gma', 'Glyma.13G238800' => 'gma', 'Glyma.13G276900' => 'gma', 'Glyma.14G078200' => 'gma', 'Glyma.15G074500' => 'gma', 'Glyma.15G094100' => 'gma', 'Glyma.17G247200' => 'gma', 'Glyma.18G120100' => 'gma', 'Glyma.20G176000' => 'gma', 'Gohir.A01G063600' => 'ghi', 'Gohir.A01G170301' => 'ghi', 'Gohir.A02G060500' => 'ghi', 'Gohir.A05G133850' => 'ghi', 'Gohir.A05G161400' => 'ghi', 'Gohir.A06G012900' => 'ghi', 'Gohir.A06G035901' => 'ghi', 'Gohir.A06G127100' => 'ghi', 'Gohir.A06G210500' => 'ghi', 'Gohir.A08G008650' => 'ghi', 'Gohir.A09G072700' => 'ghi', 'Gohir.A09G088301' => 'ghi', 'Gohir.A10G040600' => 'ghi', 'Gohir.A12G036300' => 'ghi', 'Gohir.A12G143350' => 'ghi', 'Gohir.A12G165500' => 'ghi', 'Gohir.A13G145700' => 'ghi', 'Gohir.D01G050000' => 'ghi', 'Gohir.D01G051366' => 'ghi', 'Gohir.D01G161350' => 'ghi', 'Gohir.D02G065900' => 'ghi', 'Gohir.D05G164200' => 'ghi', 'Gohir.D05G355500' => 'ghi', 'Gohir.D06G010400' => 'ghi', 'Gohir.D06G111250' => 'ghi', 'Gohir.D06G132000' => 'ghi', 'Gohir.D06G210500' => 'ghi', 'Gohir.D07G165675' => 'ghi', 'Gohir.D08G062240' => 'ghi', 'Gohir.D08G086101' => 'ghi', 'Gohir.D08G138060' => 'ghi', 'Gohir.D09G072300' => 'ghi', 'Gohir.D10G041400' => 'ghi', 'Gohir.D11G191020' => 'ghi', 'Gohir.D11G212066' => 'ghi', 'Gohir.D12G036300' => 'ghi', 'Gohir.D12G168600' => 'ghi', 'Gohir.D13G150600' => 'ghi', 'Gorai.001G057300' => 'gra', 'Gorai.002G069900' => 'gra', 'Gorai.002G200000' => 'gra', 'Gorai.003G067600' => 'gra', 'Gorai.005G074800' => 'gra', 'Gorai.006G087300' => 'gra', 'Gorai.008G037500' => 'gra', 'Gorai.008G181400' => 'gra', 'Gorai.009G169400' => 'gra', 'Gorai.009G387900' => 'gra', 'Gorai.010G013300' => 'gra', 'Gorai.010G153800' => 'gra', 'Gorai.010G255800' => 'gra', 'Gorai.011G043700' => 'gra', 'Gorai.011G198900' => 'gra', 'Gorai.013G168400' => 'gra', 'GSVIVG01005212001' => 'vvi', 'GSVIVG01006163001' => 'vvi', 'GSVIVG01009625001' => 'vvi', 'GSVIVG01014338001' => 'vvi', 'GSVIVG01020005001' => 'vvi', 'GSVIVG01021450001' => 'vvi', 'GSVIVG01023975001' => 'vvi', 'GSVIVG01034490001' => 'vvi', 'HanXRQChr04g0112071' => 'han', 'HanXRQChr05g0131151' => 'han', 'HanXRQChr09g0262371' => 'han', 'HanXRQChr09g0268401' => 'han', 'HanXRQChr10g0279241' => 'han', 'HanXRQChr10g0297961' => 'han', 'HanXRQChr11g0326231' => 'han', 'HanXRQChr11g0328471' => 'han', 'HanXRQChr16g0507941' => 'han', 'HanXRQChr17g0560211' => 'han', 'Haze_02108' => 'cav', 'Haze_02428' => 'cav', 'Haze_05593' => 'cav', 'Haze_06448' => 'cav', 'Haze_09427' => 'cav', 'Haze_12022' => 'cav', 'Haze_17612' => 'cav', 'Haze_17928' => 'cav', 'Hma1.2p1_0032F.1_g019250' => 'hma', 'Hma1.2p1_0163F.1_g072690' => 'hma', 'Hma1.2p1_0265F.1_g106710' => 'hma', 'Hma1.2p1_0286F.1_g113970' => 'hma', 'Hma1.2p1_0363F.1_g136640' => 'hma', 'Hma1.2p1_0584F.1_g183470' => 'hma', 'Hma1.2p1_0885F.1_g232570' => 'hma', 'HPP92_006022' => 'vpl', 'HPP92_007320' => 'vpl', 'HPP92_011521' => 'vpl', 'HPP92_019387' => 'vpl', 'HPP92_024038' => 'vpl', 'Hund05891' => 'sun', 'Hund06450' => 'sun', 'Hund12053' => 'sun', 'Hund16800' => 'sun', 'Hund21222' => 'sun', 'Hund22896' => 'sun', 'Hund23746' => 'sun', 'Hund27083' => 'sun', 'Lalb_Chr02g0141831' => 'lal', 'Lalb_Chr02g0141841' => 'lal', 'Lalb_Chr05g0220411' => 'lal', 'Lalb_Chr06g0162081' => 'lal', 'Lalb_Chr09g0327651' => 'lal', 'Lalb_Chr13g0295051' => 'lal', 'Lalb_Chr15g0086801' => 'lal', 'Lalb_Chr16g0383781' => 'lal', 'Lalb_Chr16g0383791' => 'lal', 'Lalb_Chr18g0055441' => 'lal', 'Lalb_Chr18g0059611' => 'lal', 'Lalb_Chr20g0109661' => 'lal', 'Lalb_Chr20g0109831' => 'lal', 'Lalb_Chr20g0121871' => 'lal', 'Lalb_Chr22g0355361' => 'lal', 'Lalb_Chr25g0286371' => 'lal', 'Lj1A1187G43' => 'lonja', 'Lj1A1205T50' => 'lonja', 'Lj1A800G33' => 'lonja', 'Lj1C1187T7' => 'lonja', 'Lj1C843T11' => 'lonja', 'Lj1g0010940' => 'lja', 'Lj2A288T69' => 'lonja', 'Lj3g0024276' => 'lja', 'Lj4A47T76' => 'lonja', 'Lj4g0005805' => 'lja', 'Lj4g0006097' => 'lja', 'Lj4g0008528' => 'lja', 'Lj4g0024907' => 'lja', 'Lj5g0012472' => 'lja', 'Lj5g0018648' => 'lja', 'Lj6C789G1' => 'lonja', 'Lj6g0004000' => 'lja', 'Lj7A292G67' => 'lonja', 'Lj7A292T64' => 'lonja', 'Lj9A400T58' => 'lonja', 'Lsat_1_v5_gn_1_126181' => 'lsa', 'Lsat_1_v5_gn_4_123041' => 'lsa', 'Lsat_1_v5_gn_4_133620' => 'lsa', 'Lsat_1_v5_gn_4_53221' => 'lsa', 'Lsat_1_v5_gn_4_71961' => 'lsa', 'Lsat_1_v5_gn_7_105241' => 'lsa', 'Lsat_1_v5_gn_7_21361' => 'lsa', 'Lsat_1_v5_gn_7_28860' => 'lsa', 'Lsat_1_v5_gn_7_31260' => 'lsa', 'Lsat_1_v5_gn_8_52801' => 'lsa', 'Manes.02G191400' => 'mes', 'Manes.03G110100' => 'mes', 'Manes.04G071100' => 'mes', 'Manes.05G100500' => 'mes', 'Manes.05G164700' => 'mes', 'Manes.15G087000' => 'mes', 'Manes.15G121500' => 'mes', 'Manes.16G028300' => 'mes', 'Manes.17G046100' => 'mes', 'Manes.17G069800' => 'mes', 'Manes.18G100500' => 'mes', 'Mapoly0002s0109' => 'mpo', 'Mapoly0024s0007' => 'mpo', 'Mapoly0089s0032' => 'mpo', 'MBI04_g42241_MAGBIO' => 'mbi', 'MBI05_g11988_MAGBIO' => 'mbi', 'MBI05_g35452_MAGBIO' => 'mbi', 'MBI07_g30179_MAGBIO' => 'mbi', 'MBI07_g35859_MAGBIO' => 'mbi', 'MBI07_g35860_MAGBIO' => 'mbi', 'MBI07_g37166_MAGBIO' => 'mbi', 'MBI08_g18172_MAGBIO' => 'mbi', 'MBI09_g08441_MAGBIO' => 'mbi', 'MBI13_g01676_MAGBIO' => 'mbi', 'MBI14_g42955_MAGBIO' => 'mbi', 'MBI16_g13161_MAGBIO' => 'mbi', 'MBI17_g27204_MAGBIO' => 'mbi', 'MBI19_g21595_MAGBIO' => 'mbi', 'MD00G1148400' => 'mdo', 'MD02G1301200' => 'mdo', 'MD03G1227800' => 'mdo', 'MD05G1041100' => 'mdo', 'MD05G1124800' => 'mdo', 'MD05G1284000' => 'mdo', 'MD05G1338800' => 'mdo', 'MD05G1338900' => 'mdo', 'MD07G1022800' => 'mdo', 'MD10G1047500' => 'mdo', 'MD10G1127500' => 'mdo', 'MD10G1262300' => 'mdo', 'MD10G1293800' => 'mdo', 'MD16G1074300' => 'mdo', 'Medtr1g021670' => 'mtr', 'Medtr1g096320' => 'mtr', 'Medtr2g013690' => 'mtr', 'Medtr2g019450' => 'mtr', 'Medtr2g085170' => 'mtr', 'Medtr4g088785' => 'mtr', 'Medtr8g055930' => 'mtr', 'Medtr8g085850' => 'mtr', 'MELO3C002605.2' => 'cme', 'MELO3C003891.2' => 'cme', 'MELO3C004012.2' => 'cme', 'MELO3C007134.2' => 'cme', 'MELO3C008118.2' => 'cme', 'MELO3C016700.2' => 'cme', 'MELO3C024127.2' => 'cme', 'MELO3C033361.2' => 'cme', 'MELO3C033362.2' => 'cme', 'Migut.C00430' => 'egut', 'Migut.C01246' => 'egut', 'Migut.E00101' => 'egut', 'Migut.H01486' => 'egut', 'Migut.H01939' => 'egut', 'Migut.K00360' => 'egut', 'Migut.M00910' => 'egut', 'Migut.M01139' => 'egut', 'Migut.N02677' => 'egut', 'MSTRG.13252' => 'ama', 'MSTRG.14701' => 'ama', 'MSTRG.1521' => 'ama', 'MSTRG.15884' => 'ama', 'MSTRG.16242' => 'ama', 'MSTRG.22285' => 'ama', 'MSTRG.22444' => 'ama', 'MSTRG.2349' => 'ama', 'MSTRG.26308' => 'ama', 'MSTRG.28296' => 'ama', 'MSTRG.9895' => 'ama', 'Nitab4.5_0000110g0060' => 'nta', 'Nitab4.5_0000420g0130' => 'nta', 'Nitab4.5_0000422g0030' => 'nta', 'Nitab4.5_0000560g0180' => 'nta', 'Nitab4.5_0000703g0100' => 'nta', 'Nitab4.5_0000786g0200' => 'nta', 'Nitab4.5_0001336g0020' => 'nta', 'Nitab4.5_0001796g0030' => 'nta', 'Nitab4.5_0003348g0060' => 'nta', 'Nitab4.5_0003698g0040' => 'nta', 'Nitab4.5_0003942g0090' => 'nta', 'Nitab4.5_0004775g0070' => 'nta', 'Nitab4.5_0004864g0030' => 'nta', 'Nitab4.5_0005615g0020' => 'nta', 'Nitab4.5_0009288g0030' => 'nta', 'Nitab4.5_0009341g0010' => 'nta', 'Nitab4.5_0009535g0010' => 'nta', 'Nn1g03995' => 'nnu', 'Nn1g04100' => 'nnu', 'Nn1g06530' => 'nnu', 'Nn3g16404' => 'nnu', 'Nn3g17212' => 'nnu', 'Nn3g20776' => 'nnu', 'Nn3g21923' => 'nnu', 'Nn5g27737' => 'nnu', 'Nn5g29461' => 'nnu', 'Nn7g38355' => 'nnu', 'Nn8g39873' => 'nnu', 'Oeu000548.2' => 'oeu', 'Oeu004672.1' => 'oeu', 'Oeu015605.2' => 'oeu', 'Oeu016092.1' => 'oeu', 'Oeu017879.3' => 'oeu', 'Oeu024910.1' => 'oeu', 'Oeu028965.1' => 'oeu', 'Oeu031269.1' => 'oeu', 'Oeu031270.1' => 'oeu', 'Oeu032535.1' => 'oeu', 'Oeu034151.1' => 'oeu', 'Oeu034152.1' => 'oeu', 'Oeu034588.2' => 'oeu', 'Oeu050846.1' => 'oeu', 'Oeu050849.2' => 'oeu', 'Oeu051063.2' => 'oeu', 'Oeu052368.1' => 'oeu', 'Oeu052370.1' => 'oeu', 'Os01g0210400' => 'osa', 'Os01g0304300' => 'osa', 'Os01g0749100' => 'osa', 'Os02g0745800' => 'osa', 'Os03g0769050' => 'osa', 'Os05g0531500' => 'osa', 'Os06g0724300' => 'osa', 'Os11g0198100' => 'osa', 'Peaxi162Scf00069g01425' => 'pax', 'Peaxi162Scf00280g00811' => 'pax', 'Peaxi162Scf00310g00615' => 'pax', 'Peaxi162Scf00362g00542' => 'pax', 'Peaxi162Scf00461g00310' => 'pax', 'Peaxi162Scf00530g00118' => 'pax', 'Peaxi162Scf00541g00057' => 'pax', 'Peaxi162Scf00661g00017' => 'pax', 'Peaxi162Scf00926g00027' => 'pax', 'Peaxi162Scf01064g00263' => 'pax', 'Peaxi162Scf01211g00135' => 'pax', 'PGR004G2336' => 'pgr', 'PGR042G0327' => 'pgr', 'PGR042G1957' => 'pgr', 'PGR042G2003' => 'pgr', 'PGR042G3929' => 'pgr', 'PGR083G1137' => 'pgr', 'PGR083G1364' => 'pgr', 'PGSC0003DMG400003381' => 'stu', 'PGSC0003DMG400003417' => 'stu', 'PGSC0003DMG400008981' => 'stu', 'PGSC0003DMG400012417' => 'stu', 'PGSC0003DMG400012823' => 'stu', 'PGSC0003DMG400016885' => 'stu', 'PGSC0003DMG400022812' => 'stu', 'PGSC0003DMG400029726' => 'stu', 'PGSC0003DMG401009243' => 'stu', 'PGSC0003DMG401031505' => 'stu', 'PGSC0003DMG402031505' => 'stu', 'Phvul.001G017600' => 'pvu', 'Phvul.002G193500' => 'pvu', 'Phvul.002G228900' => 'pvu', 'Phvul.002G236800' => 'pvu', 'Phvul.003G049500' => 'pvu', 'Phvul.005G072000' => 'pvu', 'Phvul.006G164800' => 'pvu', 'Phvul.006G185100' => 'pvu', 'Phvul.007G090000' => 'pvu', 'Potri.001G399800' => 'ptr', 'Potri.002G149900' => 'ptr', 'Potri.004G044100' => 'ptr', 'Potri.004G177600' => 'ptr', 'Potri.009G138000' => 'ptr', 'Potri.010G094000' => 'ptr', 'Potri.011G053000' => 'ptr', 'Potri.011G119300' => 'ptr', 'Potri.013G113700' => 'ptr', 'Potri.018G107800' => 'ptr', 'Potri.019G084100' => 'ptr', 'Pp3c14_23720' => 'ppa', 'Pp3c16_6340' => 'ppa', 'Pp3c23_13420' => 'ppa', 'Pp3c24_2740' => 'ppa', 'Pp3c25_860' => 'ppa', 'Pp3c8_21750' => 'ppa', 'Prupe.1G273000' => 'ppe', 'Prupe.1G273700' => 'ppe', 'Prupe.1G274100' => 'ppe', 'Prupe.2G023300' => 'ppe', 'Prupe.4G048000' => 'ppe', 'Prupe.4G080400' => 'ppe', 'Prupe.4G181200' => 'ppe', 'Prupe.8G056900' => 'ppe', 'Prupe.8G168700' => 'ppe', 'Psat1g189080' => 'psa', 'Psat1g204760' => 'psa', 'Psat4g175560' => 'psa', 'Psat4g177720' => 'psa', 'Psat5g244240' => 'psa', 'Psat6g010720' => 'psa', 'Psat6g187200' => 'psa', 'Psat7g072040' => 'psa', 'PSO017G3501' => 'pso', 'PSO063G2148' => 'pso', 'PSO063G5608' => 'pso', 'PSO210G6392' => 'pso', 'PSO541G2319' => 'pso', 'PSO541G2836' => 'pso', 'PSO541G4012' => 'pso', 'PSO541G6253' => 'pso', 'PSO675G0580' => 'pso', 'PSO675G0856' => 'pso', 'PSO675G5635' => 'pso', 'PSO675G9157' => 'pso', 'PSO832G1660' => 'pso', 'PSO832G1969' => 'pso', 'QL02p007186' => 'qlo', 'QL02p033904' => 'qlo', 'QL03p064391' => 'qlo', 'QL05p040593' => 'qlo', 'QL05p058242' => 'qlo', 'QL08p021825' => 'qlo', 'QL11p004981' => 'qlo', 'RcHm_v2.0_Chr1g0318301' => 'rch', 'RcHm_v2.0_Chr4g0418501' => 'rch', 'RcHm_v2.0_Chr4g0439971' => 'rch', 'RcHm_v2.0_Chr5g0008541' => 'rch', 'RcHm_v2.0_Chr5g0014101' => 'rch', 'RcHm_v2.0_Chr5g0014131' => 'rch', 'RcHm_v2.0_Chr5g0033621' => 'rch', 'RcHm_v2.0_Chr6g0272041' => 'rch', 'RcHm_v2.0_Chr6g0278831' => 'rch', 'Rhsim02G0130400' => 'rsi', 'Rhsim02G0171100' => 'rsi', 'Rhsim05G0053000' => 'rsi', 'Rhsim05G0053100' => 'rsi', 'Rhsim06G0096500' => 'rsi', 'Rhsim06G0096600' => 'rsi', 'Rhsim06G0199100' => 'rsi', 'Rhsim12G0062300' => 'rsi', 'Rhsim12G0062800' => 'rsi', 'Sabra02G0118600' => 'sbr', 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'Solyc03g079860.2' => 'sly', 'Solyc04g079770.3' => 'sly', 'Solyc05g007430.4' => 'sly', 'Solyc07g063150.3' => 'sly', 'Solyc08g016620.3' => 'sly', 'Solyc09g057590.3' => 'sly', 'Solyc09g057600.1' => 'sly', 'Solyc10g009050.3' => 'sly', 'Solyc11g017420.2' => 'sly', 'Sopen01g053810' => 'spe', 'Sopen02g023040' => 'spe', 'Sopen03g002440' => 'spe', 'Sopen04g033350' => 'spe', 'Sopen05g003310' => 'spe', 'Sopen07g004050' => 'spe', 'Sopen07g031340' => 'spe', 'Sopen08g006990' => 'spe', 'Sopen10g004830' => 'spe', 'Sopen11g009370' => 'spe', 'Sp1g24450' => 'spa', 'Sp1g29670' => 'spa', 'Sp1g39600' => 'spa', 'Sp2g11080' => 'spa', 'Sp2g13970' => 'spa', 'Sp4g16130' => 'spa', 'Sp6g13080' => 'spa', 'Sp7g37270' => 'spa', 'TAR371G0065' => 'tar', 'TAR376G0340' => 'tar', 'TAR376G0435' => 'tar', 'TAR381G0002' => 'tar', 'TAR381G1236' => 'tar', 'TAR624G0055' => 'tar', 'TAR624G0324' => 'tar', 'TAR624G0696' => 'tar', 'TAR624G0906' => 'tar', 'TAR625G0107' => 'tar', 'TAR626G0015' => 'tar', 'TAR626G1356' => 'tar', 'TAR627G0888' => 'tar', 'TAR628G0399' => 'tar', 'TAR628G1327' => 'tar', 'TAR629G2831' => 'tar', 'TAR629G2874' => 'tar', 'TAR633G1432' => 'tar', 'TAR633G2771' => 'tar', 'THA.LOC104803394' => 'tha', 'THA.LOC104805153' => 'tha', 'THA.LOC104806784' => 'tha', 'THA.LOC104810473' => 'tha', 'THA.LOC104813100' => 'tha', 'THA.LOC104814215' => 'tha', 'THA.LOC104815554' => 'tha', 'THA.LOC104820544' => 'tha', 'THA.LOC104824754' => 'tha', 'THA.LOC104827717' => 'tha', 'Thecc.02G031400' => 'tca', 'Thecc.02G055900' => 'tca', 'Thecc.02G350800' => 'tca', 'Thecc.06G150900' => 'tca', 'Thecc.06G186600' => 'tca', 'Thecc.07G089600' => 'tca', 'Thecc.08G020400' => 'tca', 'Thecc.08G182100' => 'tca', 'Thhalv10000873m.g' => 'esa', 'Thhalv10004185m.g' => 'esa', 'Thhalv10006981m.g' => 'esa', 'Thhalv10007204m.g' => 'esa', 'Thhalv10011374m.g' => 'esa', 'Thhalv10013482m.g' => 'esa', 'Thhalv10017801m.g' => 'esa', 'Thhalv10024983m.g' => 'esa', 'TPR.G12072' => 'tpr', 'TPR.G15769' => 'tpr', 'TPR.G16504' => 'tpr', 'TPR.G16506' => 'tpr', 'TPR.G24345' => 'tpr', 'TPR.G26666' => 'tpr', 'TPR.G27320' => 'tpr', 'TPR.G31819' => 'tpr', 'TPR.G38879' => 'tpr', 'TPR.G39015' => 'tpr', 'TPR.G8819' => 'tpr', 'TWI09G0924' => 'twi', 'TWI12G0811' => 'twi', 'TWI12G1294' => 'twi', 'TWI31G0150' => 'twi', 'TWI36G1262' => 'twi', 'TWI38G1287' => 'twi', 'TWI38G1633' => 'twi', 'TWI38G1982' => 'twi', 'TWI39G0116' => 'twi', 'TWI60G1011' => 'twi', 'TWI63G0171' => 'twi', 'TWI73G0839' => 'twi', 'TWI79G1511' => 'twi', 'unitig_0.g915' => 'ugi', 'unitig_0.g916' => 'ugi', 'unitig_21.g20219' => 'ugi', 'unitig_21.g20416' => 'ugi', 'unitig_578.g16132' => 'ugi', 'unitig_578.g16718' => 'ugi', 'unitig_62.g23481' => 'ugi', 'unitig_744.g24535' => 'ugi', 'unitig_749.g13525' => 'ugi', 'vmacro01248' => 'vma', 'vmacro02290' => 'vma', 'vmacro10946' => 'vma', 'vmacro11865' => 'vma', 'vmacro12493' => 'vma', 'vmacro17322' => 'vma', 'vmacro21599' => 'vma', 'vmacro23041' => 'vma', 'VMungo0251G0004' => 'vmu', 'VMungo0251G2639' => 'vmu', 'VMungo0251G2967' => 'vmu', 'VMungo0540G0864' => 'vmu', 'VMungo0540G1569' => 'vmu', 'VMungo0647G0317' => 'vmu', 'VMungo0720G1373' => 'vmu', 'VMungo0720G1508' => 'vmu', 'VMungo1080G0485' => 'vmu', 'VMungo1215G3177' => 'vmu', 'Zm00001eb112600' => 'zma', 'Zm00001eb120220' => 'zma', 'Zm00001eb153240' => 'zma', 'Zm00001eb168880' => 'zma', 'Zm00001eb213920' => 'zma', 'Zm00001eb228280' => 'zma', 'Zm00001eb254580' => 'zma', 'Zm00001eb272180' => 'zma', 'Zm00001eb293190' => 'zma', 'Zm00001eb322930' => 'zma', 'Zm00001eb353360' => 'zma', 'Zm00001eb353390' => 'zma', 'Zm00001eb353430' => 'zma', 'Zm00001eb353440' => 'zma', 'Zm00001eb353780' => 'zma' ), 'gf_id' => 'HOM05D000499', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000499' ), 'data_identifier' => 'HOM05D000499', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000499', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1066', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p29780' => 'bna', 'A02p33180' => 'bna', 'A03p16470' => 'bna', 'A03p66010' => 'bna', 'A04p25970' => 'bna', 'A06p01270' => 'bna', 'A06p46080' => 'bna', 'A07p11400' => 'bna', 'A08p01840' => 'bna', 'A08p08230' => 'bna', 'A08p25740' => 'bna', 'A09p32070' => 'bna', 'A09p37830' => 'bna', 'A09p42840' => 'bna', 'A09p42850' => 'bna', 'Aa31LG10G2060' => 'aar', 'Aa31LG2G7410' => 'aar', 'Aa31LG6G10200' => 'aar', 'Aa31LG6G16680' => 'aar', 'Aa31LG6G8470' => 'aar', 'Aa31LG9G12730' => 'aar', 'Aa31LG9G13680' => 'aar', 'Aa31LG9G14920' => 'aar', 'Aa31LG9G6650' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4977' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5467' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3254' => 'aag', 'Actinidia02578' => 'ach', 'Actinidia07693' => 'ach', 'Actinidia08413' => 'ach', 'Actinidia08414' => 'ach', 'Actinidia15289' => 'ach', 'Actinidia19871' => 'ach', 'Actinidia21475' => 'ach', 'Actinidia22576' => 'ach', 'Actinidia28327' => 'ach', 'Actinidia32491' => 'ach', 'Actinidia39463' => 'ach', 'Actinidia39571' => 'ach', 'Ah.01g013750' => 'amhyb', 'Ah.01g023210' => 'amhyb', 'Ah.04g164850' => 'amhyb', 'Ah.05g178060' => 'amhyb', 'Ah.07g204270' => 'amhyb', 'Ah.07g208480' => 'amhyb', 'Ah.09g237410' => 'amhyb', 'Ah.14g089460' => 'amhyb', 'AL1G41790' => 'aly', 'AL1G49050' => 'aly', 'AL1G53810' => 'aly', 'AL1G61400' => 'aly', 'AL4G18580' => 'aly', 'AL5G12510' => 'aly', 'AL5G12540' => 'aly', 'AL6G43230' => 'aly', 'AL7G10370' => 'aly', 'AL7G19250' => 'aly', 'AL8G12240' => 'aly', 'AL8G18540' => 'aly', 'Aqoxy1G02409' => 'aox', 'Aqoxy2G03993' => 'aox', 'Aqoxy3G03357' => 'aox', 'Aqoxy4G00785' => 'aox', 'Aqoxy5G02598' => 'aox', 'Aqoxy6G00132' => 'aox', 'Aqoxy7G01776' => 'aox', 'Aqoxy7G02316' => 'aox', 'Aqoxy7G03973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.12AFKW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B8730' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27IQR1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3F75VG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3RE0GA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41TCQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.527VTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FIR39' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5W8UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DA38EV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ63HS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H1I32C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HC27T5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4M8AP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7N3CZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9UVDZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LS1NQA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT1D4B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SKC4TM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCFV76' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF9Q1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQWD9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1ZM88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WE07RT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YCK7VH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJE6Q6' => 'arhy', 'AT1G28240' => 'ath', 'AT1G34550' => 'ath', 'AT1G53040' => 'ath', 'AT2G02910' => 'ath', 'AT4G09630' => 'ath', 'AT4G38500' => 'ath', 'AT5G42660' => 'ath', 'AT5G46220' => 'ath', 'ATR0152G026' => 'atr', 'ATR0564G343' => 'atr', 'ATR0706G151' => 'atr', 'ATR0733G207' => 'atr', 'ATR0751G234' => 'atr', 'ATR0807G048' => 'atr', 'ATR1091G084' => 'atr', 'Atru.chr10.1229' => 'acertr', 'Atru.chr10.1230' => 'acertr', 'Atru.chr10.1874' => 'acertr', 'Atru.chr11.1808' => 'acertr', 'Atru.chr13.1795' => 'acertr', 'Atru.chr13.570' => 'acertr', 'Atru.chr2.2608' => 'acertr', 'Atru.chr2.2609' => 'acertr', 'Atru.chr5.3428' => 'acertr', 'Atru.chr8.1171' => 'acertr', 'AUR62004651' => 'cqu', 'AUR62008675' => 'cqu', 'AUR62010014' => 'cqu', 'AUR62013004' => 'cqu', 'AUR62014825' => 'cqu', 'AUR62015015' => 'cqu', 'AUR62015151' => 'cqu', 'AUR62017020' => 'cqu', 'AUR62019422' => 'cqu', 'AUR62023570' => 'cqu', 'AUR62025571' => 'cqu', 'AUR62029098' => 'cqu', 'AUR62033863' => 'cqu', 'AUR62034296' => 'cqu', 'AUR62040075' => 'cqu', 'BcaB02g07334' => 'bca', 'BcaB02g10575' => 'bca', 'BcaB03g12119' => 'bca', 'BcaB03g12120' => 'bca', 'BcaB03g13945' => 'bca', 'BcaB04g17123' => 'bca', 'BcaB04g17867' => 'bca', 'BcaB04g19839' => 'bca', 'BcaB07g30317' => 'bca', 'BcaB07g32432' => 'bca', 'BcaB07g33362' => 'bca', 'BcaB08g36611' => 'bca', 'BcaC01g00028' => 'bca', 'BcaC01g01356' => 'bca', 'BcaC01g02034' => 'bca', 'BcaC01g06051' => 'bca', 'BcaC03g16839' => 'bca', 'BcaC03g17176' => 'bca', 'BcaC05g26829' => 'bca', 'BcaC06g31490' => 'bca', 'BcaC06g35344' => 'bca', 'BcaC06g36570' => 'bca', 'BcaC07g37537' => 'bca', 'BcaC08g43491' => 'bca', 'BcaC08g43773' => 'bca', 'BcaNung00234' => 'bca', 'BcaNung01982' => 'bca', 'BcaNung03707' => 'bca', 'BcaNung06454' => 'bca', 'BolC2t10762H' => 'bol', 'BolC2t11191H' => 'bol', 'BolC3t14322H' => 'bol', 'BolC3t19747H' => 'bol', 'BolC3t21425H' => 'bol', 'BolC4t27800H' => 'bol', 'BolC5t31423H' => 'bol', 'BolC6t35951H' => 'bol', 'BolC6t36282H' => 'bol', 'BolC7t40678H' => 'bol', 'BolC7t40679H' => 'bol', 'BolC7t42222H' => 'bol', 'BolC7t43492H' => 'bol', 'BolC7t46785H' => 'bol', 'BolC8t47853H' => 'bol', 'BolC9t56805H' => 'bol', 'BraA02t08000Z' => 'bra', 'BraA02t08341Z' => 'bra', 'BraA03t10936Z' => 'bra', 'BraA03t15657Z' => 'bra', 'BraA04t18100Z' => 'bra', 'BraA05t20523Z' => 'bra', 'BraA06t23353Z' => 'bra', 'BraA06t27473Z' => 'bra', 'BraA06t27769Z' => 'bra', 'BraA07t28928Z' => 'bra', 'BraA08t32236Z' => 'bra', 'BraA08t32841Z' => 'bra', 'BraA08t34524Z' => 'bra', 'BraA09t38742Z' => 'bra', 'BraA09t39295Z' => 'bra', 'C02p47180' => 'bna', 'C02p50990' => 'bna', 'C03p19360' => 'bna', 'C03p74950' => 'bna', 'C03p91000' => 'bna', 'C04p63260' => 'bna', 'C05p27050' => 'bna', 'C06p08750' => 'bna', 'C06p11490' => 'bna', 'C07p02820' => 'bna', 'C07p17180' => 'bna', 'C07p29440' => 'bna', 'C07p63730' => 'bna', 'C09p39260' => 'bna', 'CAN.G1164.34' => 'can', 'CAN.G1164.39' => 'can', 'CAN.G1530.3' => 'can', 'CAN.G162.61' => 'can', 'CAN.G176.6' => 'can', 'CAN.G289.49' => 'can', 'CAN.G370.21' => 'can', 'CAN.G370.22' => 'can', 'CAN.G371.117' => 'can', 'CAN.G58.37' => 'can', 'CAN.G588.98' => 'can', 'CANSAT21G2266' => 'cansat', 'CANSAT25G2799' => 'cansat', 'CANSAT35G0862' => 'cansat', 'CANSAT35G1704' => 'cansat', 'CANSAT35G1760' => 'cansat', 'CANSAT56G3971' => 'cansat', 'CANSAT56G4116' => 'cansat', 'CANSAT80G1259' => 'cansat', 'CARHR027730' => 'chi', 'CARHR033880' => 'chi', 'CARHR043270' => 'chi', 'CARHR145330' => 'chi', 'CARHR145340' => 'chi', 'CARHR175570' => 'chi', 'CARHR181570' => 'chi', 'CARHR258470' => 'chi', 'CARHR260490' => 'chi', 'CARHR294220' => 'chi', 'Carub.0001s2668' => 'cru', 'Carub.0001s3257' => 'cru', 'Carub.0001s4220' => 'cru', 'Carub.0005s0179' => 'cru', 'Carub.0006s2807' => 'cru', 'Carub.0007s0039' => 'cru', 'Carub.0008s0169' => 'cru', 'Carub.0008s0636' => 'cru', 'Ca_00338_v3' => 'car', 'Ca_00542_v3' => 'car', 'Ca_01844_v3' => 'car', 'Ca_10611_v3' => 'car', 'Ca_13326_v3' => 'car', 'Ca_17944_v3' => 'car', 'Ca_18546_v3' => 'car', 'Ca_24219_v3' => 'car', 'Ca_29972_v3' => 'car', 'CBR_g3681' => 'cbr', 'CBR_g40021' => 'cbr', 'Cc01_g08140' => 'ccan', 'Cc02_g13410' => 'ccan', 'Cc02_g37480' => 'ccan', 'Cc05_g12030' => 'ccan', 'Cc09_g03370' => 'ccan', 'Cc09_g10300' => 'ccan', 'Cc10_g03530' => 'ccan', 'Cc10_g11380' => 'ccan', 'CDE01G0176' => 'cde', 'CDE02G0675' => 'cde', 'CDE02G0942' => 'cde', 'CDE02G1153' => 'cde', 'CDE02G4177' => 'cde', 'CDE04G2117' => 'cde', 'CDE04G2736' => 'cde', 'CDE08G1161' => 'cde', 'CDE09G1238' => 'cde', 'Cfa000467' => 'cfa', 'Cfa000947' => 'cfa', 'Cfa004969' => 'cfa', 'Cfa005284' => 'cfa', 'Cfa008993' => 'cfa', 'Cfa018187' => 'cfa', 'Cfa018454' => 'cfa', 'Cfa020585' => 'cfa', 'Ciclev10000424m.g' => 'ccl', 'Ciclev10003605m.g' => 'ccl', 'Ciclev10007828m.g' => 'ccl', 'Ciclev10014620m.g' => 'ccl', 'Ciclev10015169m.g' => 'ccl', 'Ciclev10018291m.g' => 'ccl', 'Ciclev10028256m.g' => 'ccl', 'Ciclev10033822m.g' => 'ccl', 'CiPaw.05G060300' => 'cil', 'CiPaw.05G085000' => 'cil', 'CiPaw.06G083700' => 'cil', 'CiPaw.06G120300' => 'cil', 'CiPaw.09G060500' => 'cil', 'CiPaw.09G123800' => 'cil', 'CiPaw.11G169700' => 'cil', 'CiPaw.12G118300' => 'cil', 'CiPaw.15G071000' => 'cil', 'CiPaw.15G081900' => 'cil', 'ClCG01G024610' => 'cla', 'ClCG03G006070' => 'cla', 'ClCG05G019250' => 'cla', 'ClCG09G009500' => 'cla', 'ClCG11G008200' => 'cla', 'ClCG11G018080' => 'cla', 'COL.COLO4_17373' => 'col', 'COL.COLO4_22994' => 'col', 'COL.COLO4_26389' => 'col', 'COL.COLO4_27170' => 'col', 'COL.COLO4_31074' => 'col', 'COL.COLO4_31465' => 'col', 'COL.COLO4_36438' => 'col', 'COL.COLO4_36439' => 'col', 'Cpa.g.c38781' => 'cpa', 'Cpa.g.sc128.12' => 'cpa', 'Cpa.g.sc166.7' => 'cpa', 'Cpa.g.sc166.8' => 'cpa', 'Cpa.g.sc20.111' => 'cpa', 'Cpa.g.sc27.31' => 'cpa', 'Cpa.g.sc64.36' => 'cpa', 'Cpa.g.sc64.37' => 'cpa', 'Cpa.g.sc66.49' => 'cpa', 'Cpa.g.sc80.64' => 'cpa', 'CsaV3_1G012320' => 'csa', 'CsaV3_2G008480' => 'csa', 'CsaV3_2G033450' => 'csa', 'CsaV3_3G044830' => 'csa', 'CsaV3_4G033710' => 'csa', 'CsaV3_6G051730' => 'csa', 'CsaV3_7G025350' => 'csa', 'CSS0001067' => 'camsi', 'CSS0005996' => 'camsi', 'CSS0006590' => 'camsi', 'CSS0009673' => 'camsi', 'CSS0010201' => 'camsi', 'CSS0010549' => 'camsi', 'CSS0011364' => 'camsi', 'CSS0014473' => 'camsi', 'CSS0014961' => 'camsi', 'CSS0020191' => 'camsi', 'CSS0021165' => 'camsi', 'CSS0022306' => 'camsi', 'CSS0030591' => 'camsi', 'CSS0030696' => 'camsi', 'CSS0032653' => 'camsi', 'CSS0037487' => 'camsi', 'CSS0041102' => 'camsi', 'CSS0041261' => 'camsi', 'CSS0046246' => 'camsi', 'CSS0049256' => 'camsi', 'DCAR_004075' => 'dca', 'DCAR_011538' => 'dca', 'DCAR_019553' => 'dca', 'DCAR_020952' => 'dca', 'DCAR_021739' => 'dca', 'DCAR_027407' => 'dca', 'DCAR_027913' => 'dca', 'DCAR_028066' => 'dca', 'Dinv05899' => 'din', 'Dinv07563' => 'din', 'Dinv08010' => 'din', 'Dinv14125' => 'din', 'Dinv20172' => 'din', 'Dinv30743' => 'din', 'Dinv31229' => 'din', 'Dinv34162' => 'din', 'Dinv36028' => 'din', 'Dinv39368' => 'din', 'Dinv40565' => 'din', 'Dinv41706' => 'din', 'Duzib052G0089' => 'dzi', 'Duzib116G0641' => 'dzi', 'Duzib132G0069' => 'dzi', 'Duzib132G1219' => 'dzi', 'Duzib147G0278' => 'dzi', 'Duzib160G0480' => 'dzi', 'Duzib170G0661' => 'dzi', 'Duzib177G0591' => 'dzi', 'Duzib187G1353' => 'dzi', 'Duzib192G0858' => 'dzi', 'Duzib192G0883' => 'dzi', 'Duzib213G0506' => 'dzi', 'Duzib235G0289' => 'dzi', 'Duzib251G0422' => 'dzi', 'ECA232G3898' => 'eca', 'ECA233G5950' => 'eca', 'ECA234G1699' => 'eca', 'ECA234G2421' => 'eca', 'ECA236G0426' => 'eca', 'ECA236G4331' => 'eca', 'ECA248G2573' => 'eca', 'EL10Ac1g00077' => 'bvu', 'EL10Ac1g01746' => 'bvu', 'EL10Ac2g03464' => 'bvu', 'EL10Ac4g08176' => 'bvu', 'EL10Ac7g17521' => 'bvu', 'EL10Ac8g20386' => 'bvu', 'EL10Ac9g21343' => 'bvu', 'EL10Ac9g22688' => 'bvu', 'Eucgr.B03434' => 'egr', 'Eucgr.D00618' => 'egr', 'Eucgr.E02395' => 'egr', 'Eucgr.F01129' => 'egr', 'Eucgr.F02622' => 'egr', 'Eucgr.F04207' => 'egr', 'FAN01G0570' => 'fan', 'FAN03G3351' => 'fan', 'FAN06G3702' => 'fan', 'FAN07G2149' => 'fan', 'FAN10G3758' => 'fan', 'FAN11G1170' => 'fan', 'FAN11G2050' => 'fan', 'FAN11G2724' => 'fan', 'FAN12G1700' => 'fan', 'FAN12G2028' => 'fan', 'FAN15G1160' => 'fan', 'FAN15G3063' => 'fan', 'FAN16G2540' => 'fan', 'FAN16G3077' => 'fan', 'FAN16G3624' => 'fan', 'FAN17G0221' => 'fan', 'FAN20G2492' => 'fan', 'FAN20G2905' => 'fan', 'FAN21G0548' => 'fan', 'FAN21G1300' => 'fan', 'FAN22G0077' => 'fan', 'FAN22G1315' => 'fan', 'FAN24G1280' => 'fan', 'FAN24G1445' => 'fan', 'FAN24G3527' => 'fan', 'FAN25G0464' => 'fan', 'FAN25G2885' => 'fan', 'FAN25G3270' => 'fan', 'FAN27G1101' => 'fan', 'FAN27G2846' => 'fan', 'FAN27G3524' => 'fan', 'FvH4_2g11770' => 'fve', 'FvH4_2g15630' => 'fve', 'FvH4_3g05570' => 'fve', 'FvH4_3g09110' => 'fve', 'FvH4_3g19940' => 'fve', 'FvH4_4g04821' => 'fve', 'FvH4_4g31480' => 'fve', 'FvH4_7g01740' => 'fve', 'Glyma.05G130400' => 'gma', 'Glyma.05G156400' => 'gma', 'Glyma.07G197000' => 'gma', 'Glyma.08G085151' => 'gma', 'Glyma.08G114500' => 'gma', 'Glyma.08G300400' => 'gma', 'Glyma.10G215800' => 'gma', 'Glyma.12G224400' => 'gma', 'Glyma.13G179300' => 'gma', 'Glyma.13G218151' => 'gma', 'Glyma.13G238800' => 'gma', 'Glyma.13G276900' => 'gma', 'Glyma.14G078200' => 'gma', 'Glyma.15G074500' => 'gma', 'Glyma.15G094100' => 'gma', 'Glyma.17G247200' => 'gma', 'Glyma.18G120100' => 'gma', 'Glyma.20G176000' => 'gma', 'Gohir.A01G063600' => 'ghi', 'Gohir.A01G170301' => 'ghi', 'Gohir.A02G060500' => 'ghi', 'Gohir.A05G133850' => 'ghi', 'Gohir.A05G161400' => 'ghi', 'Gohir.A06G012900' => 'ghi', 'Gohir.A06G035901' => 'ghi', 'Gohir.A06G127100' => 'ghi', 'Gohir.A06G210500' => 'ghi', 'Gohir.A08G008650' => 'ghi', 'Gohir.A09G072700' => 'ghi', 'Gohir.A09G088301' => 'ghi', 'Gohir.A10G040600' => 'ghi', 'Gohir.A12G036300' => 'ghi', 'Gohir.A12G143350' => 'ghi', 'Gohir.A12G165500' => 'ghi', 'Gohir.A13G145700' => 'ghi', 'Gohir.D01G050000' => 'ghi', 'Gohir.D01G051366' => 'ghi', 'Gohir.D01G161350' => 'ghi', 'Gohir.D02G065900' => 'ghi', 'Gohir.D05G164200' => 'ghi', 'Gohir.D05G355500' => 'ghi', 'Gohir.D06G010400' => 'ghi', 'Gohir.D06G111250' => 'ghi', 'Gohir.D06G132000' => 'ghi', 'Gohir.D06G210500' => 'ghi', 'Gohir.D07G165675' => 'ghi', 'Gohir.D08G062240' => 'ghi', 'Gohir.D08G086101' => 'ghi', 'Gohir.D08G138060' => 'ghi', 'Gohir.D09G072300' => 'ghi', 'Gohir.D10G041400' => 'ghi', 'Gohir.D11G191020' => 'ghi', 'Gohir.D11G212066' => 'ghi', 'Gohir.D12G036300' => 'ghi', 'Gohir.D12G168600' => 'ghi', 'Gohir.D13G150600' => 'ghi', 'Gorai.001G057300' => 'gra', 'Gorai.002G069900' => 'gra', 'Gorai.002G200000' => 'gra', 'Gorai.003G067600' => 'gra', 'Gorai.005G074800' => 'gra', 'Gorai.006G087300' => 'gra', 'Gorai.008G037500' => 'gra', 'Gorai.008G181400' => 'gra', 'Gorai.009G169400' => 'gra', 'Gorai.009G387900' => 'gra', 'Gorai.010G013300' => 'gra', 'Gorai.010G153800' => 'gra', 'Gorai.010G255800' => 'gra', 'Gorai.011G043700' => 'gra', 'Gorai.011G198900' => 'gra', 'Gorai.013G168400' => 'gra', 'GSVIVG01005212001' => 'vvi', 'GSVIVG01006163001' => 'vvi', 'GSVIVG01009625001' => 'vvi', 'GSVIVG01014338001' => 'vvi', 'GSVIVG01020005001' => 'vvi', 'GSVIVG01021450001' => 'vvi', 'GSVIVG01023975001' => 'vvi', 'GSVIVG01034490001' => 'vvi', 'HanXRQChr04g0112071' => 'han', 'HanXRQChr05g0131151' => 'han', 'HanXRQChr09g0262371' => 'han', 'HanXRQChr09g0268401' => 'han', 'HanXRQChr10g0279241' => 'han', 'HanXRQChr10g0297961' => 'han', 'HanXRQChr11g0326231' => 'han', 'HanXRQChr11g0328471' => 'han', 'HanXRQChr16g0507941' => 'han', 'HanXRQChr17g0560211' => 'han', 'Haze_02108' => 'cav', 'Haze_02428' => 'cav', 'Haze_05593' => 'cav', 'Haze_06448' => 'cav', 'Haze_09427' => 'cav', 'Haze_12022' => 'cav', 'Haze_17612' => 'cav', 'Haze_17928' => 'cav', 'Hma1.2p1_0032F.1_g019250' => 'hma', 'Hma1.2p1_0163F.1_g072690' => 'hma', 'Hma1.2p1_0265F.1_g106710' => 'hma', 'Hma1.2p1_0286F.1_g113970' => 'hma', 'Hma1.2p1_0363F.1_g136640' => 'hma', 'Hma1.2p1_0584F.1_g183470' => 'hma', 'Hma1.2p1_0885F.1_g232570' => 'hma', 'HPP92_006022' => 'vpl', 'HPP92_007320' => 'vpl', 'HPP92_011521' => 'vpl', 'HPP92_019387' => 'vpl', 'HPP92_024038' => 'vpl', 'Hund05891' => 'sun', 'Hund06450' => 'sun', 'Hund12053' => 'sun', 'Hund16800' => 'sun', 'Hund21222' => 'sun', 'Hund22896' => 'sun', 'Hund23746' => 'sun', 'Hund27083' => 'sun', 'Lalb_Chr02g0141831' => 'lal', 'Lalb_Chr02g0141841' => 'lal', 'Lalb_Chr05g0220411' => 'lal', 'Lalb_Chr06g0162081' => 'lal', 'Lalb_Chr09g0327651' => 'lal', 'Lalb_Chr13g0295051' => 'lal', 'Lalb_Chr15g0086801' => 'lal', 'Lalb_Chr16g0383781' => 'lal', 'Lalb_Chr16g0383791' => 'lal', 'Lalb_Chr18g0055441' => 'lal', 'Lalb_Chr18g0059611' => 'lal', 'Lalb_Chr20g0109661' => 'lal', 'Lalb_Chr20g0109831' => 'lal', 'Lalb_Chr20g0121871' => 'lal', 'Lalb_Chr22g0355361' => 'lal', 'Lalb_Chr25g0286371' => 'lal', 'Lj1A1187G43' => 'lonja', 'Lj1A1205T50' => 'lonja', 'Lj1A800G33' => 'lonja', 'Lj1C1187T7' => 'lonja', 'Lj1C843T11' => 'lonja', 'Lj1g0010940' => 'lja', 'Lj2A288T69' => 'lonja', 'Lj3g0024276' => 'lja', 'Lj4A47T76' => 'lonja', 'Lj4g0005805' => 'lja', 'Lj4g0006097' => 'lja', 'Lj4g0008528' => 'lja', 'Lj4g0024907' => 'lja', 'Lj5g0012472' => 'lja', 'Lj5g0018648' => 'lja', 'Lj6C789G1' => 'lonja', 'Lj6g0004000' => 'lja', 'Lj7A292G67' => 'lonja', 'Lj7A292T64' => 'lonja', 'Lj9A400T58' => 'lonja', 'Lsat_1_v5_gn_1_126181' => 'lsa', 'Lsat_1_v5_gn_4_123041' => 'lsa', 'Lsat_1_v5_gn_4_133620' => 'lsa', 'Lsat_1_v5_gn_4_53221' => 'lsa', 'Lsat_1_v5_gn_4_71961' => 'lsa', 'Lsat_1_v5_gn_7_105241' => 'lsa', 'Lsat_1_v5_gn_7_21361' => 'lsa', 'Lsat_1_v5_gn_7_28860' => 'lsa', 'Lsat_1_v5_gn_7_31260' => 'lsa', 'Lsat_1_v5_gn_8_52801' => 'lsa', 'Manes.02G191400' => 'mes', 'Manes.03G110100' => 'mes', 'Manes.04G071100' => 'mes', 'Manes.05G100500' => 'mes', 'Manes.05G164700' => 'mes', 'Manes.15G087000' => 'mes', 'Manes.15G121500' => 'mes', 'Manes.16G028300' => 'mes', 'Manes.17G046100' => 'mes', 'Manes.17G069800' => 'mes', 'Manes.18G100500' => 'mes', 'Mapoly0002s0109' => 'mpo', 'Mapoly0024s0007' => 'mpo', 'Mapoly0089s0032' => 'mpo', 'MBI04_g42241_MAGBIO' => 'mbi', 'MBI05_g11988_MAGBIO' => 'mbi', 'MBI05_g35452_MAGBIO' => 'mbi', 'MBI07_g30179_MAGBIO' => 'mbi', 'MBI07_g35859_MAGBIO' => 'mbi', 'MBI07_g35860_MAGBIO' => 'mbi', 'MBI07_g37166_MAGBIO' => 'mbi', 'MBI08_g18172_MAGBIO' => 'mbi', 'MBI09_g08441_MAGBIO' => 'mbi', 'MBI13_g01676_MAGBIO' => 'mbi', 'MBI14_g42955_MAGBIO' => 'mbi', 'MBI16_g13161_MAGBIO' => 'mbi', 'MBI17_g27204_MAGBIO' => 'mbi', 'MBI19_g21595_MAGBIO' => 'mbi', 'MD00G1148400' => 'mdo', 'MD02G1301200' => 'mdo', 'MD03G1227800' => 'mdo', 'MD05G1041100' => 'mdo', 'MD05G1124800' => 'mdo', 'MD05G1284000' => 'mdo', 'MD05G1338800' => 'mdo', 'MD05G1338900' => 'mdo', 'MD07G1022800' => 'mdo', 'MD10G1047500' => 'mdo', 'MD10G1127500' => 'mdo', 'MD10G1262300' => 'mdo', 'MD10G1293800' => 'mdo', 'MD16G1074300' => 'mdo', 'Medtr1g021670' => 'mtr', 'Medtr1g096320' => 'mtr', 'Medtr2g013690' => 'mtr', 'Medtr2g019450' => 'mtr', 'Medtr2g085170' => 'mtr', 'Medtr4g088785' => 'mtr', 'Medtr8g055930' => 'mtr', 'Medtr8g085850' => 'mtr', 'MELO3C002605.2' => 'cme', 'MELO3C003891.2' => 'cme', 'MELO3C004012.2' => 'cme', 'MELO3C007134.2' => 'cme', 'MELO3C008118.2' => 'cme', 'MELO3C016700.2' => 'cme', 'MELO3C024127.2' => 'cme', 'MELO3C033361.2' => 'cme', 'MELO3C033362.2' => 'cme', 'Migut.C00430' => 'egut', 'Migut.C01246' => 'egut', 'Migut.E00101' => 'egut', 'Migut.H01486' => 'egut', 'Migut.H01939' => 'egut', 'Migut.K00360' => 'egut', 'Migut.M00910' => 'egut', 'Migut.M01139' => 'egut', 'Migut.N02677' => 'egut', 'MSTRG.13252' => 'ama', 'MSTRG.14701' => 'ama', 'MSTRG.1521' => 'ama', 'MSTRG.15884' => 'ama', 'MSTRG.16242' => 'ama', 'MSTRG.22285' => 'ama', 'MSTRG.22444' => 'ama', 'MSTRG.2349' => 'ama', 'MSTRG.26308' => 'ama', 'MSTRG.28296' => 'ama', 'MSTRG.9895' => 'ama', 'Nitab4.5_0000110g0060' => 'nta', 'Nitab4.5_0000420g0130' => 'nta', 'Nitab4.5_0000422g0030' => 'nta', 'Nitab4.5_0000560g0180' => 'nta', 'Nitab4.5_0000703g0100' => 'nta', 'Nitab4.5_0000786g0200' => 'nta', 'Nitab4.5_0001336g0020' => 'nta', 'Nitab4.5_0001796g0030' => 'nta', 'Nitab4.5_0003348g0060' => 'nta', 'Nitab4.5_0003698g0040' => 'nta', 'Nitab4.5_0003942g0090' => 'nta', 'Nitab4.5_0004775g0070' => 'nta', 'Nitab4.5_0004864g0030' => 'nta', 'Nitab4.5_0005615g0020' => 'nta', 'Nitab4.5_0009288g0030' => 'nta', 'Nitab4.5_0009341g0010' => 'nta', 'Nitab4.5_0009535g0010' => 'nta', 'Nn1g03995' => 'nnu', 'Nn1g04100' => 'nnu', 'Nn1g06530' => 'nnu', 'Nn3g16404' => 'nnu', 'Nn3g17212' => 'nnu', 'Nn3g20776' => 'nnu', 'Nn3g21923' => 'nnu', 'Nn5g27737' => 'nnu', 'Nn5g29461' => 'nnu', 'Nn7g38355' => 'nnu', 'Nn8g39873' => 'nnu', 'Oeu000548.2' => 'oeu', 'Oeu004672.1' => 'oeu', 'Oeu015605.2' => 'oeu', 'Oeu016092.1' => 'oeu', 'Oeu017879.3' => 'oeu', 'Oeu024910.1' => 'oeu', 'Oeu028965.1' => 'oeu', 'Oeu031269.1' => 'oeu', 'Oeu031270.1' => 'oeu', 'Oeu032535.1' => 'oeu', 'Oeu034151.1' => 'oeu', 'Oeu034152.1' => 'oeu', 'Oeu034588.2' => 'oeu', 'Oeu050846.1' => 'oeu', 'Oeu050849.2' => 'oeu', 'Oeu051063.2' => 'oeu', 'Oeu052368.1' => 'oeu', 'Oeu052370.1' => 'oeu', 'Os01g0210400' => 'osa', 'Os01g0304300' => 'osa', 'Os01g0749100' => 'osa', 'Os02g0745800' => 'osa', 'Os03g0769050' => 'osa', 'Os05g0531500' => 'osa', 'Os06g0724300' => 'osa', 'Os11g0198100' => 'osa', 'Peaxi162Scf00069g01425' => 'pax', 'Peaxi162Scf00280g00811' => 'pax', 'Peaxi162Scf00310g00615' => 'pax', 'Peaxi162Scf00362g00542' => 'pax', 'Peaxi162Scf00461g00310' => 'pax', 'Peaxi162Scf00530g00118' => 'pax', 'Peaxi162Scf00541g00057' => 'pax', 'Peaxi162Scf00661g00017' => 'pax', 'Peaxi162Scf00926g00027' => 'pax', 'Peaxi162Scf01064g00263' => 'pax', 'Peaxi162Scf01211g00135' => 'pax', 'PGR004G2336' => 'pgr', 'PGR042G0327' => 'pgr', 'PGR042G1957' => 'pgr', 'PGR042G2003' => 'pgr', 'PGR042G3929' => 'pgr', 'PGR083G1137' => 'pgr', 'PGR083G1364' => 'pgr', 'PGSC0003DMG400003381' => 'stu', 'PGSC0003DMG400003417' => 'stu', 'PGSC0003DMG400008981' => 'stu', 'PGSC0003DMG400012417' => 'stu', 'PGSC0003DMG400012823' => 'stu', 'PGSC0003DMG400016885' => 'stu', 'PGSC0003DMG400022812' => 'stu', 'PGSC0003DMG400029726' => 'stu', 'PGSC0003DMG401009243' => 'stu', 'PGSC0003DMG401031505' => 'stu', 'PGSC0003DMG402031505' => 'stu', 'Phvul.001G017600' => 'pvu', 'Phvul.002G193500' => 'pvu', 'Phvul.002G228900' => 'pvu', 'Phvul.002G236800' => 'pvu', 'Phvul.003G049500' => 'pvu', 'Phvul.005G072000' => 'pvu', 'Phvul.006G164800' => 'pvu', 'Phvul.006G185100' => 'pvu', 'Phvul.007G090000' => 'pvu', 'Potri.001G399800' => 'ptr', 'Potri.002G149900' => 'ptr', 'Potri.004G044100' => 'ptr', 'Potri.004G177600' => 'ptr', 'Potri.009G138000' => 'ptr', 'Potri.010G094000' => 'ptr', 'Potri.011G053000' => 'ptr', 'Potri.011G119300' => 'ptr', 'Potri.013G113700' => 'ptr', 'Potri.018G107800' => 'ptr', 'Potri.019G084100' => 'ptr', 'Pp3c14_23720' => 'ppa', 'Pp3c16_6340' => 'ppa', 'Pp3c23_13420' => 'ppa', 'Pp3c24_2740' => 'ppa', 'Pp3c25_860' => 'ppa', 'Pp3c8_21750' => 'ppa', 'Prupe.1G273000' => 'ppe', 'Prupe.1G273700' => 'ppe', 'Prupe.1G274100' => 'ppe', 'Prupe.2G023300' => 'ppe', 'Prupe.4G048000' => 'ppe', 'Prupe.4G080400' => 'ppe', 'Prupe.4G181200' => 'ppe', 'Prupe.8G056900' => 'ppe', 'Prupe.8G168700' => 'ppe', 'Psat1g189080' => 'psa', 'Psat1g204760' => 'psa', 'Psat4g175560' => 'psa', 'Psat4g177720' => 'psa', 'Psat5g244240' => 'psa', 'Psat6g010720' => 'psa', 'Psat6g187200' => 'psa', 'Psat7g072040' => 'psa', 'PSO017G3501' => 'pso', 'PSO063G2148' => 'pso', 'PSO063G5608' => 'pso', 'PSO210G6392' => 'pso', 'PSO541G2319' => 'pso', 'PSO541G2836' => 'pso', 'PSO541G4012' => 'pso', 'PSO541G6253' => 'pso', 'PSO675G0580' => 'pso', 'PSO675G0856' => 'pso', 'PSO675G5635' => 'pso', 'PSO675G9157' => 'pso', 'PSO832G1660' => 'pso', 'PSO832G1969' => 'pso', 'QL02p007186' => 'qlo', 'QL02p033904' => 'qlo', 'QL03p064391' => 'qlo', 'QL05p040593' => 'qlo', 'QL05p058242' => 'qlo', 'QL08p021825' => 'qlo', 'QL11p004981' => 'qlo', 'RcHm_v2.0_Chr1g0318301' => 'rch', 'RcHm_v2.0_Chr4g0418501' => 'rch', 'RcHm_v2.0_Chr4g0439971' => 'rch', 'RcHm_v2.0_Chr5g0008541' => 'rch', 'RcHm_v2.0_Chr5g0014101' => 'rch', 'RcHm_v2.0_Chr5g0014131' => 'rch', 'RcHm_v2.0_Chr5g0033621' => 'rch', 'RcHm_v2.0_Chr6g0272041' => 'rch', 'RcHm_v2.0_Chr6g0278831' => 'rch', 'Rhsim02G0130400' => 'rsi', 'Rhsim02G0171100' => 'rsi', 'Rhsim05G0053000' => 'rsi', 'Rhsim05G0053100' => 'rsi', 'Rhsim06G0096500' => 'rsi', 'Rhsim06G0096600' => 'rsi', 'Rhsim06G0199100' => 'rsi', 'Rhsim12G0062300' => 'rsi', 'Rhsim12G0062800' => 'rsi', 'Sabra02G0118600' => 'sbr', 'Sabra04G0027300' => 'sbr', 'Sabra04G0119500' => 'sbr', 'Sabra08G0112500' => 'sbr', 'Sabra11G0036800' => 'sbr', 'Sabra11G0103800' => 'sbr', 'Sabra13G0096300' => 'sbr', 'Sabra16G0262300' => 'sbr', 'Sabra18G0091700' => 'sbr', 'Sabra19G0095400' => 'sbr', 'SalBow6G3080' => 'sbo', 'SalBow7G1157' => 'sbo', 'SalBow7G2123' => 'sbo', 'SalBow7G2285' => 'sbo', 'SalBow7G3537' => 'sbo', 'SalBow8G2947' => 'sbo', 'SalBow8G4463' => 'sbo', 'SalBow8G5466' => 'sbo', 'Sc01g0001750' => 'sci', 'Sc02g0006640' => 'sci', 'Sc02g0006670' => 'sci', 'Sc04g0008220' => 'sci', 'Sc05g0006190' => 'sci', 'Sc08g0002760' => 'sci', 'Sc17g0006170' => 'sci', 'Sc22g0002050' => 'sci', 'Sc23g0001190' => 'sci', 'Sc24g0000980' => 'sci', 'Sed0006245' => 'sed', 'Sed0007543' => 'sed', 'Sed0009411' => 'sed', 'Sed0010765' => 'sed', 'Sed0012944' => 'sed', 'Sed0014682' => 'sed', 'Sed0016174' => 'sed', 'Sed0016796' => 'sed', 'Sed0020317' => 'sed', 'Sed0021467' => 'sed', 'SEGI_01316' => 'sgi', 'SEGI_03374' => 'sgi', 'SEGI_16265' => 'sgi', 'SEGI_18569' => 'sgi', 'SEGI_20351' => 'sgi', 'SEGI_26395' => 'sgi', 'SEGI_29469' => 'sgi', 'SEGI_34771' => 'sgi', 'SEGI_36769' => 'sgi', 'SEGI_37139' => 'sgi', 'SGA_v2.0_scaffold100G29687' => 'sas', 'SGA_v2.0_scaffold118G32472' => 'sas', 'SGA_v2.0_scaffold14G07051' => 'sas', 'SGA_v2.0_scaffold183G39845' => 'sas', 'SGA_v2.0_scaffold1G00174' => 'sas', 'SGA_v2.0_scaffold22G09714' => 'sas', 'SGA_v2.0_scaffold333G48992' => 'sas', 'SGA_v2.0_scaffold46G17491' => 'sas', 'SGA_v2.0_scaffold49G18294' => 'sas', 'SGA_v2.0_scaffold63G21658' => 'sas', 'SHI01741' => 'shi', 'SHI05771' => 'shi', 'SHI18077' => 'shi', 'SHI20525' => 'shi', 'SHI20527' => 'shi', 'SHI20528' => 'shi', 'SMO172G0185' => 'smo', 'SMO198G0020' => 'smo', 'SMO351G0006' => 'smo', 'SMO356G0118' => 'smo', 'SMO358G0296' => 'smo', 'SMO367G0079' => 'smo', 'SMO367G1277' => 'smo', 'Solyc01g014220.3' => 'sly', 'Solyc01g111770.2' => 'sly', 'Solyc02g078180.3' => 'sly', 'Solyc03g006430.3' => 'sly', 'Solyc03g006456.1' => 'sly', 'Solyc03g079860.2' => 'sly', 'Solyc04g079770.3' => 'sly', 'Solyc05g007430.4' => 'sly', 'Solyc07g063150.3' => 'sly', 'Solyc08g016620.3' => 'sly', 'Solyc09g057590.3' => 'sly', 'Solyc09g057600.1' => 'sly', 'Solyc10g009050.3' => 'sly', 'Solyc11g017420.2' => 'sly', 'Sopen01g053810' => 'spe', 'Sopen02g023040' => 'spe', 'Sopen03g002440' => 'spe', 'Sopen04g033350' => 'spe', 'Sopen05g003310' => 'spe', 'Sopen07g004050' => 'spe', 'Sopen07g031340' => 'spe', 'Sopen08g006990' => 'spe', 'Sopen10g004830' => 'spe', 'Sopen11g009370' => 'spe', 'Sp1g24450' => 'spa', 'Sp1g29670' => 'spa', 'Sp1g39600' => 'spa', 'Sp2g11080' => 'spa', 'Sp2g13970' => 'spa', 'Sp4g16130' => 'spa', 'Sp6g13080' => 'spa', 'Sp7g37270' => 'spa', 'TAR371G0065' => 'tar', 'TAR376G0340' => 'tar', 'TAR376G0435' => 'tar', 'TAR381G0002' => 'tar', 'TAR381G1236' => 'tar', 'TAR624G0055' => 'tar', 'TAR624G0324' => 'tar', 'TAR624G0696' => 'tar', 'TAR624G0906' => 'tar', 'TAR625G0107' => 'tar', 'TAR626G0015' => 'tar', 'TAR626G1356' => 'tar', 'TAR627G0888' => 'tar', 'TAR628G0399' => 'tar', 'TAR628G1327' => 'tar', 'TAR629G2831' => 'tar', 'TAR629G2874' => 'tar', 'TAR633G1432' => 'tar', 'TAR633G2771' => 'tar', 'THA.LOC104803394' => 'tha', 'THA.LOC104805153' => 'tha', 'THA.LOC104806784' => 'tha', 'THA.LOC104810473' => 'tha', 'THA.LOC104813100' => 'tha', 'THA.LOC104814215' => 'tha', 'THA.LOC104815554' => 'tha', 'THA.LOC104820544' => 'tha', 'THA.LOC104824754' => 'tha', 'THA.LOC104827717' => 'tha', 'Thecc.02G031400' => 'tca', 'Thecc.02G055900' => 'tca', 'Thecc.02G350800' => 'tca', 'Thecc.06G150900' => 'tca', 'Thecc.06G186600' => 'tca', 'Thecc.07G089600' => 'tca', 'Thecc.08G020400' => 'tca', 'Thecc.08G182100' => 'tca', 'Thhalv10000873m.g' => 'esa', 'Thhalv10004185m.g' => 'esa', 'Thhalv10006981m.g' => 'esa', 'Thhalv10007204m.g' => 'esa', 'Thhalv10011374m.g' => 'esa', 'Thhalv10013482m.g' => 'esa', 'Thhalv10017801m.g' => 'esa', 'Thhalv10024983m.g' => 'esa', 'TPR.G12072' => 'tpr', 'TPR.G15769' => 'tpr', 'TPR.G16504' => 'tpr', 'TPR.G16506' => 'tpr', 'TPR.G24345' => 'tpr', 'TPR.G26666' => 'tpr', 'TPR.G27320' => 'tpr', 'TPR.G31819' => 'tpr', 'TPR.G38879' => 'tpr', 'TPR.G39015' => 'tpr', 'TPR.G8819' => 'tpr', 'TWI09G0924' => 'twi', 'TWI12G0811' => 'twi', 'TWI12G1294' => 'twi', 'TWI31G0150' => 'twi', 'TWI36G1262' => 'twi', 'TWI38G1287' => 'twi', 'TWI38G1633' => 'twi', 'TWI38G1982' => 'twi', 'TWI39G0116' => 'twi', 'TWI60G1011' => 'twi', 'TWI63G0171' => 'twi', 'TWI73G0839' => 'twi', 'TWI79G1511' => 'twi', 'unitig_0.g915' => 'ugi', 'unitig_0.g916' => 'ugi', 'unitig_21.g20219' => 'ugi', 'unitig_21.g20416' => 'ugi', 'unitig_578.g16132' => 'ugi', 'unitig_578.g16718' => 'ugi', 'unitig_62.g23481' => 'ugi', 'unitig_744.g24535' => 'ugi', 'unitig_749.g13525' => 'ugi', 'vmacro01248' => 'vma', 'vmacro02290' => 'vma', 'vmacro10946' => 'vma', 'vmacro11865' => 'vma', 'vmacro12493' => 'vma', 'vmacro17322' => 'vma', 'vmacro21599' => 'vma', 'vmacro23041' => 'vma', 'VMungo0251G0004' => 'vmu', 'VMungo0251G2639' => 'vmu', 'VMungo0251G2967' => 'vmu', 'VMungo0540G0864' => 'vmu', 'VMungo0540G1569' => 'vmu', 'VMungo0647G0317' => 'vmu', 'VMungo0720G1373' => 'vmu', 'VMungo0720G1508' => 'vmu', 'VMungo1080G0485' => 'vmu', 'VMungo1215G3177' => 'vmu', 'Zm00001eb112600' => 'zma', 'Zm00001eb120220' => 'zma', 'Zm00001eb153240' => 'zma', 'Zm00001eb168880' => 'zma', 'Zm00001eb213920' => 'zma', 'Zm00001eb228280' => 'zma', 'Zm00001eb254580' => 'zma', 'Zm00001eb272180' => 'zma', 'Zm00001eb293190' => 'zma', 'Zm00001eb322930' => 'zma', 'Zm00001eb353360' => 'zma', 'Zm00001eb353390' => 'zma', 'Zm00001eb353430' => 'zma', 'Zm00001eb353440' => 'zma', 'Zm00001eb353780' => 'zma' ) $gf_id = 'HOM05D000499' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000499' ) $data_identifier = 'HOM05D000499' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 29, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 12, 'amhyb' => (int) 8, 'aly' => (int) 12, 'aox' => (int) 9, 'arhy' => (int) 26, 'ath' => (int) 8, 'atr' => (int) 7, 'acertr' => (int) 10, 'cqu' => (int) 15, 'bca' => (int) 29, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 11, 'cansat' => (int) 8, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 9, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 8, 'cpa' => (int) 10, 'csa' => (int) 7, 'camsi' => (int) 20, 'dca' => (int) 8, 'din' => (int) 12, 'dzi' => (int) 14, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 6, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 38, 'gra' => (int) 16, 'vvi' => (int) 8, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 5, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 11, 'lja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 11, 'mpo' => (int) 3, 'mbi' => (int) 14, 'mdo' => (int) 14, 'mtr' => (int) 8, 'cme' => (int) 9, 'egut' => (int) 9, 'ama' => (int) 11, 'nta' => (int) 17, 'nnu' => (int) 11, 'oeu' => (int) 18, 'osa' => (int) 8, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 6, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 9, 'rsi' => (int) 9, 'sbr' => (int) 10, 'sbo' => (int) 8, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 10, 'sas' => (int) 10, 'shi' => (int) 6, 'smo' => (int) 7, 'sly' => (int) 14, 'spe' => (int) 10, 'spa' => (int) 8, 'tar' => (int) 19, 'tha' => (int) 10, 'tca' => (int) 8, 'esa' => (int) 8, 'tpr' => (int) 11, 'twi' => (int) 13, 'ugi' => (int) 9, 'vma' => (int) 8, 'vmu' => (int) 10, 'zma' => (int) 15 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb353780' $species_info = array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ) $local_species = 'sgi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000499', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1066', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p29780' => 'bna', 'A02p33180' => 'bna', 'A03p16470' => 'bna', 'A03p66010' => 'bna', 'A04p25970' => 'bna', 'A06p01270' => 'bna', 'A06p46080' => 'bna', 'A07p11400' => 'bna', 'A08p01840' => 'bna', 'A08p08230' => 'bna', 'A08p25740' => 'bna', 'A09p32070' => 'bna', 'A09p37830' => 'bna', 'A09p42840' => 'bna', 'A09p42850' => 'bna', 'Aa31LG10G2060' => 'aar', 'Aa31LG2G7410' => 'aar', 'Aa31LG6G10200' => 'aar', 'Aa31LG6G16680' => 'aar', 'Aa31LG6G8470' => 'aar', 'Aa31LG9G12730' => 'aar', 'Aa31LG9G13680' => 'aar', 'Aa31LG9G14920' => 'aar', 'Aa31LG9G6650' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4977' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5467' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3254' => 'aag', 'Actinidia02578' => 'ach', 'Actinidia07693' => 'ach', 'Actinidia08413' => 'ach', 'Actinidia08414' => 'ach', 'Actinidia15289' => 'ach', 'Actinidia19871' => 'ach', 'Actinidia21475' => 'ach', 'Actinidia22576' => 'ach', 'Actinidia28327' => 'ach', 'Actinidia32491' => 'ach', 'Actinidia39463' => 'ach', 'Actinidia39571' => 'ach', 'Ah.01g013750' => 'amhyb', 'Ah.01g023210' => 'amhyb', 'Ah.04g164850' => 'amhyb', 'Ah.05g178060' => 'amhyb', 'Ah.07g204270' => 'amhyb', 'Ah.07g208480' => 'amhyb', 'Ah.09g237410' => 'amhyb', 'Ah.14g089460' => 'amhyb', 'AL1G41790' => 'aly', 'AL1G49050' => 'aly', 'AL1G53810' => 'aly', 'AL1G61400' => 'aly', 'AL4G18580' => 'aly', 'AL5G12510' => 'aly', 'AL5G12540' => 'aly', 'AL6G43230' => 'aly', 'AL7G10370' => 'aly', 'AL7G19250' => 'aly', 'AL8G12240' => 'aly', 'AL8G18540' => 'aly', 'Aqoxy1G02409' => 'aox', 'Aqoxy2G03993' => 'aox', 'Aqoxy3G03357' => 'aox', 'Aqoxy4G00785' => 'aox', 'Aqoxy5G02598' => 'aox', 'Aqoxy6G00132' => 'aox', 'Aqoxy7G01776' => 'aox', 'Aqoxy7G02316' => 'aox', 'Aqoxy7G03973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.12AFKW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B8730' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27IQR1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3F75VG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3RE0GA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41TCQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.527VTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FIR39' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5W8UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DA38EV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ63HS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H1I32C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HC27T5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4M8AP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7N3CZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9UVDZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LS1NQA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT1D4B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SKC4TM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCFV76' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF9Q1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQWD9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1ZM88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WE07RT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YCK7VH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJE6Q6' => 'arhy', 'AT1G28240' => 'ath', 'AT1G34550' => 'ath', 'AT1G53040' => 'ath', 'AT2G02910' => 'ath', 'AT4G09630' => 'ath', 'AT4G38500' => 'ath', 'AT5G42660' => 'ath', 'AT5G46220' => 'ath', 'ATR0152G026' => 'atr', 'ATR0564G343' => 'atr', 'ATR0706G151' => 'atr', 'ATR0733G207' => 'atr', 'ATR0751G234' => 'atr', 'ATR0807G048' => 'atr', 'ATR1091G084' => 'atr', 'Atru.chr10.1229' => 'acertr', 'Atru.chr10.1230' => 'acertr', 'Atru.chr10.1874' => 'acertr', 'Atru.chr11.1808' => 'acertr', 'Atru.chr13.1795' => 'acertr', 'Atru.chr13.570' => 'acertr', 'Atru.chr2.2608' => 'acertr', 'Atru.chr2.2609' => 'acertr', 'Atru.chr5.3428' => 'acertr', 'Atru.chr8.1171' => 'acertr', 'AUR62004651' => 'cqu', 'AUR62008675' => 'cqu', 'AUR62010014' => 'cqu', 'AUR62013004' => 'cqu', 'AUR62014825' => 'cqu', 'AUR62015015' => 'cqu', 'AUR62015151' => 'cqu', 'AUR62017020' => 'cqu', 'AUR62019422' => 'cqu', 'AUR62023570' => 'cqu', 'AUR62025571' => 'cqu', 'AUR62029098' => 'cqu', 'AUR62033863' => 'cqu', 'AUR62034296' => 'cqu', 'AUR62040075' => 'cqu', 'BcaB02g07334' => 'bca', 'BcaB02g10575' => 'bca', 'BcaB03g12119' => 'bca', 'BcaB03g12120' => 'bca', 'BcaB03g13945' => 'bca', 'BcaB04g17123' => 'bca', 'BcaB04g17867' => 'bca', 'BcaB04g19839' => 'bca', 'BcaB07g30317' => 'bca', 'BcaB07g32432' => 'bca', 'BcaB07g33362' => 'bca', 'BcaB08g36611' => 'bca', 'BcaC01g00028' => 'bca', 'BcaC01g01356' => 'bca', 'BcaC01g02034' => 'bca', 'BcaC01g06051' => 'bca', 'BcaC03g16839' => 'bca', 'BcaC03g17176' => 'bca', 'BcaC05g26829' => 'bca', 'BcaC06g31490' => 'bca', 'BcaC06g35344' => 'bca', 'BcaC06g36570' => 'bca', 'BcaC07g37537' => 'bca', 'BcaC08g43491' => 'bca', 'BcaC08g43773' => 'bca', 'BcaNung00234' => 'bca', 'BcaNung01982' => 'bca', 'BcaNung03707' => 'bca', 'BcaNung06454' => 'bca', 'BolC2t10762H' => 'bol', 'BolC2t11191H' => 'bol', 'BolC3t14322H' => 'bol', 'BolC3t19747H' => 'bol', 'BolC3t21425H' => 'bol', 'BolC4t27800H' => 'bol', 'BolC5t31423H' => 'bol', 'BolC6t35951H' => 'bol', 'BolC6t36282H' => 'bol', 'BolC7t40678H' => 'bol', 'BolC7t40679H' => 'bol', 'BolC7t42222H' => 'bol', 'BolC7t43492H' => 'bol', 'BolC7t46785H' => 'bol', 'BolC8t47853H' => 'bol', 'BolC9t56805H' => 'bol', 'BraA02t08000Z' => 'bra', 'BraA02t08341Z' => 'bra', 'BraA03t10936Z' => 'bra', 'BraA03t15657Z' => 'bra', 'BraA04t18100Z' => 'bra', 'BraA05t20523Z' => 'bra', 'BraA06t23353Z' => 'bra', 'BraA06t27473Z' => 'bra', 'BraA06t27769Z' => 'bra', 'BraA07t28928Z' => 'bra', 'BraA08t32236Z' => 'bra', 'BraA08t32841Z' => 'bra', 'BraA08t34524Z' => 'bra', 'BraA09t38742Z' => 'bra', 'BraA09t39295Z' => 'bra', 'C02p47180' => 'bna', 'C02p50990' => 'bna', 'C03p19360' => 'bna', 'C03p74950' => 'bna', 'C03p91000' => 'bna', 'C04p63260' => 'bna', 'C05p27050' => 'bna', 'C06p08750' => 'bna', 'C06p11490' => 'bna', 'C07p02820' => 'bna', 'C07p17180' => 'bna', 'C07p29440' => 'bna', 'C07p63730' => 'bna', 'C09p39260' => 'bna', 'CAN.G1164.34' => 'can', 'CAN.G1164.39' => 'can', 'CAN.G1530.3' => 'can', 'CAN.G162.61' => 'can', 'CAN.G176.6' => 'can', 'CAN.G289.49' => 'can', 'CAN.G370.21' => 'can', 'CAN.G370.22' => 'can', 'CAN.G371.117' => 'can', 'CAN.G58.37' => 'can', 'CAN.G588.98' => 'can', 'CANSAT21G2266' => 'cansat', 'CANSAT25G2799' => 'cansat', 'CANSAT35G0862' => 'cansat', 'CANSAT35G1704' => 'cansat', 'CANSAT35G1760' => 'cansat', 'CANSAT56G3971' => 'cansat', 'CANSAT56G4116' => 'cansat', 'CANSAT80G1259' => 'cansat', 'CARHR027730' => 'chi', 'CARHR033880' => 'chi', 'CARHR043270' => 'chi', 'CARHR145330' => 'chi', 'CARHR145340' => 'chi', 'CARHR175570' => 'chi', 'CARHR181570' => 'chi', 'CARHR258470' => 'chi', 'CARHR260490' => 'chi', 'CARHR294220' => 'chi', 'Carub.0001s2668' => 'cru', 'Carub.0001s3257' => 'cru', 'Carub.0001s4220' => 'cru', 'Carub.0005s0179' => 'cru', 'Carub.0006s2807' => 'cru', 'Carub.0007s0039' => 'cru', 'Carub.0008s0169' => 'cru', 'Carub.0008s0636' => 'cru', 'Ca_00338_v3' => 'car', 'Ca_00542_v3' => 'car', 'Ca_01844_v3' => 'car', 'Ca_10611_v3' => 'car', 'Ca_13326_v3' => 'car', 'Ca_17944_v3' => 'car', 'Ca_18546_v3' => 'car', 'Ca_24219_v3' => 'car', 'Ca_29972_v3' => 'car', 'CBR_g3681' => 'cbr', 'CBR_g40021' => 'cbr', 'Cc01_g08140' => 'ccan', 'Cc02_g13410' => 'ccan', 'Cc02_g37480' => 'ccan', 'Cc05_g12030' => 'ccan', 'Cc09_g03370' => 'ccan', 'Cc09_g10300' => 'ccan', 'Cc10_g03530' => 'ccan', 'Cc10_g11380' => 'ccan', 'CDE01G0176' => 'cde', 'CDE02G0675' => 'cde', 'CDE02G0942' => 'cde', 'CDE02G1153' => 'cde', 'CDE02G4177' => 'cde', 'CDE04G2117' => 'cde', 'CDE04G2736' => 'cde', 'CDE08G1161' => 'cde', 'CDE09G1238' => 'cde', 'Cfa000467' => 'cfa', 'Cfa000947' => 'cfa', 'Cfa004969' => 'cfa', 'Cfa005284' => 'cfa', 'Cfa008993' => 'cfa', 'Cfa018187' => 'cfa', 'Cfa018454' => 'cfa', 'Cfa020585' => 'cfa', 'Ciclev10000424m.g' => 'ccl', 'Ciclev10003605m.g' => 'ccl', 'Ciclev10007828m.g' => 'ccl', 'Ciclev10014620m.g' => 'ccl', 'Ciclev10015169m.g' => 'ccl', 'Ciclev10018291m.g' => 'ccl', 'Ciclev10028256m.g' => 'ccl', 'Ciclev10033822m.g' => 'ccl', 'CiPaw.05G060300' => 'cil', 'CiPaw.05G085000' => 'cil', 'CiPaw.06G083700' => 'cil', 'CiPaw.06G120300' => 'cil', 'CiPaw.09G060500' => 'cil', 'CiPaw.09G123800' => 'cil', 'CiPaw.11G169700' => 'cil', 'CiPaw.12G118300' => 'cil', 'CiPaw.15G071000' => 'cil', 'CiPaw.15G081900' => 'cil', 'ClCG01G024610' => 'cla', 'ClCG03G006070' => 'cla', 'ClCG05G019250' => 'cla', 'ClCG09G009500' => 'cla', 'ClCG11G008200' => 'cla', 'ClCG11G018080' => 'cla', 'COL.COLO4_17373' => 'col', 'COL.COLO4_22994' => 'col', 'COL.COLO4_26389' => 'col', 'COL.COLO4_27170' => 'col', 'COL.COLO4_31074' => 'col', 'COL.COLO4_31465' => 'col', 'COL.COLO4_36438' => 'col', 'COL.COLO4_36439' => 'col', 'Cpa.g.c38781' => 'cpa', 'Cpa.g.sc128.12' => 'cpa', 'Cpa.g.sc166.7' => 'cpa', 'Cpa.g.sc166.8' => 'cpa', 'Cpa.g.sc20.111' => 'cpa', 'Cpa.g.sc27.31' => 'cpa', 'Cpa.g.sc64.36' => 'cpa', 'Cpa.g.sc64.37' => 'cpa', 'Cpa.g.sc66.49' => 'cpa', 'Cpa.g.sc80.64' => 'cpa', 'CsaV3_1G012320' => 'csa', 'CsaV3_2G008480' => 'csa', 'CsaV3_2G033450' => 'csa', 'CsaV3_3G044830' => 'csa', 'CsaV3_4G033710' => 'csa', 'CsaV3_6G051730' => 'csa', 'CsaV3_7G025350' => 'csa', 'CSS0001067' => 'camsi', 'CSS0005996' => 'camsi', 'CSS0006590' => 'camsi', 'CSS0009673' => 'camsi', 'CSS0010201' => 'camsi', 'CSS0010549' => 'camsi', 'CSS0011364' => 'camsi', 'CSS0014473' => 'camsi', 'CSS0014961' => 'camsi', 'CSS0020191' => 'camsi', 'CSS0021165' => 'camsi', 'CSS0022306' => 'camsi', 'CSS0030591' => 'camsi', 'CSS0030696' => 'camsi', 'CSS0032653' => 'camsi', 'CSS0037487' => 'camsi', 'CSS0041102' => 'camsi', 'CSS0041261' => 'camsi', 'CSS0046246' => 'camsi', 'CSS0049256' => 'camsi', 'DCAR_004075' => 'dca', 'DCAR_011538' => 'dca', 'DCAR_019553' => 'dca', 'DCAR_020952' => 'dca', 'DCAR_021739' => 'dca', 'DCAR_027407' => 'dca', 'DCAR_027913' => 'dca', 'DCAR_028066' => 'dca', 'Dinv05899' => 'din', 'Dinv07563' => 'din', 'Dinv08010' => 'din', 'Dinv14125' => 'din', 'Dinv20172' => 'din', 'Dinv30743' => 'din', 'Dinv31229' => 'din', 'Dinv34162' => 'din', 'Dinv36028' => 'din', 'Dinv39368' => 'din', 'Dinv40565' => 'din', 'Dinv41706' => 'din', 'Duzib052G0089' => 'dzi', 'Duzib116G0641' => 'dzi', 'Duzib132G0069' => 'dzi', 'Duzib132G1219' => 'dzi', 'Duzib147G0278' => 'dzi', 'Duzib160G0480' => 'dzi', 'Duzib170G0661' => 'dzi', 'Duzib177G0591' => 'dzi', 'Duzib187G1353' => 'dzi', 'Duzib192G0858' => 'dzi', 'Duzib192G0883' => 'dzi', 'Duzib213G0506' => 'dzi', 'Duzib235G0289' => 'dzi', 'Duzib251G0422' => 'dzi', 'ECA232G3898' => 'eca', 'ECA233G5950' => 'eca', 'ECA234G1699' => 'eca', 'ECA234G2421' => 'eca', 'ECA236G0426' => 'eca', 'ECA236G4331' => 'eca', 'ECA248G2573' => 'eca', 'EL10Ac1g00077' => 'bvu', 'EL10Ac1g01746' => 'bvu', 'EL10Ac2g03464' => 'bvu', 'EL10Ac4g08176' => 'bvu', 'EL10Ac7g17521' => 'bvu', 'EL10Ac8g20386' => 'bvu', 'EL10Ac9g21343' => 'bvu', 'EL10Ac9g22688' => 'bvu', 'Eucgr.B03434' => 'egr', 'Eucgr.D00618' => 'egr', 'Eucgr.E02395' => 'egr', 'Eucgr.F01129' => 'egr', 'Eucgr.F02622' => 'egr', 'Eucgr.F04207' => 'egr', 'FAN01G0570' => 'fan', 'FAN03G3351' => 'fan', 'FAN06G3702' => 'fan', 'FAN07G2149' => 'fan', 'FAN10G3758' => 'fan', 'FAN11G1170' => 'fan', 'FAN11G2050' => 'fan', 'FAN11G2724' => 'fan', 'FAN12G1700' => 'fan', 'FAN12G2028' => 'fan', 'FAN15G1160' => 'fan', 'FAN15G3063' => 'fan', 'FAN16G2540' => 'fan', 'FAN16G3077' => 'fan', 'FAN16G3624' => 'fan', 'FAN17G0221' => 'fan', 'FAN20G2492' => 'fan', 'FAN20G2905' => 'fan', 'FAN21G0548' => 'fan', 'FAN21G1300' => 'fan', 'FAN22G0077' => 'fan', 'FAN22G1315' => 'fan', 'FAN24G1280' => 'fan', 'FAN24G1445' => 'fan', 'FAN24G3527' => 'fan', 'FAN25G0464' => 'fan', 'FAN25G2885' => 'fan', 'FAN25G3270' => 'fan', 'FAN27G1101' => 'fan', 'FAN27G2846' => 'fan', 'FAN27G3524' => 'fan', 'FvH4_2g11770' => 'fve', 'FvH4_2g15630' => 'fve', 'FvH4_3g05570' => 'fve', 'FvH4_3g09110' => 'fve', 'FvH4_3g19940' => 'fve', 'FvH4_4g04821' => 'fve', 'FvH4_4g31480' => 'fve', 'FvH4_7g01740' => 'fve', 'Glyma.05G130400' => 'gma', 'Glyma.05G156400' => 'gma', 'Glyma.07G197000' => 'gma', 'Glyma.08G085151' => 'gma', 'Glyma.08G114500' => 'gma', 'Glyma.08G300400' => 'gma', 'Glyma.10G215800' => 'gma', 'Glyma.12G224400' => 'gma', 'Glyma.13G179300' => 'gma', 'Glyma.13G218151' => 'gma', 'Glyma.13G238800' => 'gma', 'Glyma.13G276900' => 'gma', 'Glyma.14G078200' => 'gma', 'Glyma.15G074500' => 'gma', 'Glyma.15G094100' => 'gma', 'Glyma.17G247200' => 'gma', 'Glyma.18G120100' => 'gma', 'Glyma.20G176000' => 'gma', 'Gohir.A01G063600' => 'ghi', 'Gohir.A01G170301' => 'ghi', 'Gohir.A02G060500' => 'ghi', 'Gohir.A05G133850' => 'ghi', 'Gohir.A05G161400' => 'ghi', 'Gohir.A06G012900' => 'ghi', 'Gohir.A06G035901' => 'ghi', 'Gohir.A06G127100' => 'ghi', 'Gohir.A06G210500' => 'ghi', 'Gohir.A08G008650' => 'ghi', 'Gohir.A09G072700' => 'ghi', 'Gohir.A09G088301' => 'ghi', 'Gohir.A10G040600' => 'ghi', 'Gohir.A12G036300' => 'ghi', 'Gohir.A12G143350' => 'ghi', 'Gohir.A12G165500' => 'ghi', 'Gohir.A13G145700' => 'ghi', 'Gohir.D01G050000' => 'ghi', 'Gohir.D01G051366' => 'ghi', 'Gohir.D01G161350' => 'ghi', 'Gohir.D02G065900' => 'ghi', 'Gohir.D05G164200' => 'ghi', 'Gohir.D05G355500' => 'ghi', 'Gohir.D06G010400' => 'ghi', 'Gohir.D06G111250' => 'ghi', 'Gohir.D06G132000' => 'ghi', 'Gohir.D06G210500' => 'ghi', 'Gohir.D07G165675' => 'ghi', 'Gohir.D08G062240' => 'ghi', 'Gohir.D08G086101' => 'ghi', 'Gohir.D08G138060' => 'ghi', 'Gohir.D09G072300' => 'ghi', 'Gohir.D10G041400' => 'ghi', 'Gohir.D11G191020' => 'ghi', 'Gohir.D11G212066' => 'ghi', 'Gohir.D12G036300' => 'ghi', 'Gohir.D12G168600' => 'ghi', 'Gohir.D13G150600' => 'ghi', 'Gorai.001G057300' => 'gra', 'Gorai.002G069900' => 'gra', 'Gorai.002G200000' => 'gra', 'Gorai.003G067600' => 'gra', 'Gorai.005G074800' => 'gra', 'Gorai.006G087300' => 'gra', 'Gorai.008G037500' => 'gra', 'Gorai.008G181400' => 'gra', 'Gorai.009G169400' => 'gra', 'Gorai.009G387900' => 'gra', 'Gorai.010G013300' => 'gra', 'Gorai.010G153800' => 'gra', 'Gorai.010G255800' => 'gra', 'Gorai.011G043700' => 'gra', 'Gorai.011G198900' => 'gra', 'Gorai.013G168400' => 'gra', 'GSVIVG01005212001' => 'vvi', 'GSVIVG01006163001' => 'vvi', 'GSVIVG01009625001' => 'vvi', 'GSVIVG01014338001' => 'vvi', 'GSVIVG01020005001' => 'vvi', 'GSVIVG01021450001' => 'vvi', 'GSVIVG01023975001' => 'vvi', 'GSVIVG01034490001' => 'vvi', 'HanXRQChr04g0112071' => 'han', 'HanXRQChr05g0131151' => 'han', 'HanXRQChr09g0262371' => 'han', 'HanXRQChr09g0268401' => 'han', 'HanXRQChr10g0279241' => 'han', 'HanXRQChr10g0297961' => 'han', 'HanXRQChr11g0326231' => 'han', 'HanXRQChr11g0328471' => 'han', 'HanXRQChr16g0507941' => 'han', 'HanXRQChr17g0560211' => 'han', 'Haze_02108' => 'cav', 'Haze_02428' => 'cav', 'Haze_05593' => 'cav', 'Haze_06448' => 'cav', 'Haze_09427' => 'cav', 'Haze_12022' => 'cav', 'Haze_17612' => 'cav', 'Haze_17928' => 'cav', 'Hma1.2p1_0032F.1_g019250' => 'hma', 'Hma1.2p1_0163F.1_g072690' => 'hma', 'Hma1.2p1_0265F.1_g106710' => 'hma', 'Hma1.2p1_0286F.1_g113970' => 'hma', 'Hma1.2p1_0363F.1_g136640' => 'hma', 'Hma1.2p1_0584F.1_g183470' => 'hma', 'Hma1.2p1_0885F.1_g232570' => 'hma', 'HPP92_006022' => 'vpl', 'HPP92_007320' => 'vpl', 'HPP92_011521' => 'vpl', 'HPP92_019387' => 'vpl', 'HPP92_024038' => 'vpl', 'Hund05891' => 'sun', 'Hund06450' => 'sun', 'Hund12053' => 'sun', 'Hund16800' => 'sun', 'Hund21222' => 'sun', 'Hund22896' => 'sun', 'Hund23746' => 'sun', 'Hund27083' => 'sun', 'Lalb_Chr02g0141831' => 'lal', 'Lalb_Chr02g0141841' => 'lal', 'Lalb_Chr05g0220411' => 'lal', 'Lalb_Chr06g0162081' => 'lal', 'Lalb_Chr09g0327651' => 'lal', 'Lalb_Chr13g0295051' => 'lal', 'Lalb_Chr15g0086801' => 'lal', 'Lalb_Chr16g0383781' => 'lal', 'Lalb_Chr16g0383791' => 'lal', 'Lalb_Chr18g0055441' => 'lal', 'Lalb_Chr18g0059611' => 'lal', 'Lalb_Chr20g0109661' => 'lal', 'Lalb_Chr20g0109831' => 'lal', 'Lalb_Chr20g0121871' => 'lal', 'Lalb_Chr22g0355361' => 'lal', 'Lalb_Chr25g0286371' => 'lal', 'Lj1A1187G43' => 'lonja', 'Lj1A1205T50' => 'lonja', 'Lj1A800G33' => 'lonja', 'Lj1C1187T7' => 'lonja', 'Lj1C843T11' => 'lonja', 'Lj1g0010940' => 'lja', 'Lj2A288T69' => 'lonja', 'Lj3g0024276' => 'lja', 'Lj4A47T76' => 'lonja', 'Lj4g0005805' => 'lja', 'Lj4g0006097' => 'lja', 'Lj4g0008528' => 'lja', 'Lj4g0024907' => 'lja', 'Lj5g0012472' => 'lja', 'Lj5g0018648' => 'lja', 'Lj6C789G1' => 'lonja', 'Lj6g0004000' => 'lja', 'Lj7A292G67' => 'lonja', 'Lj7A292T64' => 'lonja', 'Lj9A400T58' => 'lonja', 'Lsat_1_v5_gn_1_126181' => 'lsa', 'Lsat_1_v5_gn_4_123041' => 'lsa', 'Lsat_1_v5_gn_4_133620' => 'lsa', 'Lsat_1_v5_gn_4_53221' => 'lsa', 'Lsat_1_v5_gn_4_71961' => 'lsa', 'Lsat_1_v5_gn_7_105241' => 'lsa', 'Lsat_1_v5_gn_7_21361' => 'lsa', 'Lsat_1_v5_gn_7_28860' => 'lsa', 'Lsat_1_v5_gn_7_31260' => 'lsa', 'Lsat_1_v5_gn_8_52801' => 'lsa', 'Manes.02G191400' => 'mes', 'Manes.03G110100' => 'mes', 'Manes.04G071100' => 'mes', 'Manes.05G100500' => 'mes', 'Manes.05G164700' => 'mes', 'Manes.15G087000' => 'mes', 'Manes.15G121500' => 'mes', 'Manes.16G028300' => 'mes', 'Manes.17G046100' => 'mes', 'Manes.17G069800' => 'mes', 'Manes.18G100500' => 'mes', 'Mapoly0002s0109' => 'mpo', 'Mapoly0024s0007' => 'mpo', 'Mapoly0089s0032' => 'mpo', 'MBI04_g42241_MAGBIO' => 'mbi', 'MBI05_g11988_MAGBIO' => 'mbi', 'MBI05_g35452_MAGBIO' => 'mbi', 'MBI07_g30179_MAGBIO' => 'mbi', 'MBI07_g35859_MAGBIO' => 'mbi', 'MBI07_g35860_MAGBIO' => 'mbi', 'MBI07_g37166_MAGBIO' => 'mbi', 'MBI08_g18172_MAGBIO' => 'mbi', 'MBI09_g08441_MAGBIO' => 'mbi', 'MBI13_g01676_MAGBIO' => 'mbi', 'MBI14_g42955_MAGBIO' => 'mbi', 'MBI16_g13161_MAGBIO' => 'mbi', 'MBI17_g27204_MAGBIO' => 'mbi', 'MBI19_g21595_MAGBIO' => 'mbi', 'MD00G1148400' => 'mdo', 'MD02G1301200' => 'mdo', 'MD03G1227800' => 'mdo', 'MD05G1041100' => 'mdo', 'MD05G1124800' => 'mdo', 'MD05G1284000' => 'mdo', 'MD05G1338800' => 'mdo', 'MD05G1338900' => 'mdo', 'MD07G1022800' => 'mdo', 'MD10G1047500' => 'mdo', 'MD10G1127500' => 'mdo', 'MD10G1262300' => 'mdo', 'MD10G1293800' => 'mdo', 'MD16G1074300' => 'mdo', 'Medtr1g021670' => 'mtr', 'Medtr1g096320' => 'mtr', 'Medtr2g013690' => 'mtr', 'Medtr2g019450' => 'mtr', 'Medtr2g085170' => 'mtr', 'Medtr4g088785' => 'mtr', 'Medtr8g055930' => 'mtr', 'Medtr8g085850' => 'mtr', 'MELO3C002605.2' => 'cme', 'MELO3C003891.2' => 'cme', 'MELO3C004012.2' => 'cme', 'MELO3C007134.2' => 'cme', 'MELO3C008118.2' => 'cme', 'MELO3C016700.2' => 'cme', 'MELO3C024127.2' => 'cme', 'MELO3C033361.2' => 'cme', 'MELO3C033362.2' => 'cme', 'Migut.C00430' => 'egut', 'Migut.C01246' => 'egut', 'Migut.E00101' => 'egut', 'Migut.H01486' => 'egut', 'Migut.H01939' => 'egut', 'Migut.K00360' => 'egut', 'Migut.M00910' => 'egut', 'Migut.M01139' => 'egut', 'Migut.N02677' => 'egut', 'MSTRG.13252' => 'ama', 'MSTRG.14701' => 'ama', 'MSTRG.1521' => 'ama', 'MSTRG.15884' => 'ama', 'MSTRG.16242' => 'ama', 'MSTRG.22285' => 'ama', 'MSTRG.22444' => 'ama', 'MSTRG.2349' => 'ama', 'MSTRG.26308' => 'ama', 'MSTRG.28296' => 'ama', 'MSTRG.9895' => 'ama', 'Nitab4.5_0000110g0060' => 'nta', 'Nitab4.5_0000420g0130' => 'nta', 'Nitab4.5_0000422g0030' => 'nta', 'Nitab4.5_0000560g0180' => 'nta', 'Nitab4.5_0000703g0100' => 'nta', 'Nitab4.5_0000786g0200' => 'nta', 'Nitab4.5_0001336g0020' => 'nta', 'Nitab4.5_0001796g0030' => 'nta', 'Nitab4.5_0003348g0060' => 'nta', 'Nitab4.5_0003698g0040' => 'nta', 'Nitab4.5_0003942g0090' => 'nta', 'Nitab4.5_0004775g0070' => 'nta', 'Nitab4.5_0004864g0030' => 'nta', 'Nitab4.5_0005615g0020' => 'nta', 'Nitab4.5_0009288g0030' => 'nta', 'Nitab4.5_0009341g0010' => 'nta', 'Nitab4.5_0009535g0010' => 'nta', 'Nn1g03995' => 'nnu', 'Nn1g04100' => 'nnu', 'Nn1g06530' => 'nnu', 'Nn3g16404' => 'nnu', 'Nn3g17212' => 'nnu', 'Nn3g20776' => 'nnu', 'Nn3g21923' => 'nnu', 'Nn5g27737' => 'nnu', 'Nn5g29461' => 'nnu', 'Nn7g38355' => 'nnu', 'Nn8g39873' => 'nnu', 'Oeu000548.2' => 'oeu', 'Oeu004672.1' => 'oeu', 'Oeu015605.2' => 'oeu', 'Oeu016092.1' => 'oeu', 'Oeu017879.3' => 'oeu', 'Oeu024910.1' => 'oeu', 'Oeu028965.1' => 'oeu', 'Oeu031269.1' => 'oeu', 'Oeu031270.1' => 'oeu', 'Oeu032535.1' => 'oeu', 'Oeu034151.1' => 'oeu', 'Oeu034152.1' => 'oeu', 'Oeu034588.2' => 'oeu', 'Oeu050846.1' => 'oeu', 'Oeu050849.2' => 'oeu', 'Oeu051063.2' => 'oeu', 'Oeu052368.1' => 'oeu', 'Oeu052370.1' => 'oeu', 'Os01g0210400' => 'osa', 'Os01g0304300' => 'osa', 'Os01g0749100' => 'osa', 'Os02g0745800' => 'osa', 'Os03g0769050' => 'osa', 'Os05g0531500' => 'osa', 'Os06g0724300' => 'osa', 'Os11g0198100' => 'osa', 'Peaxi162Scf00069g01425' => 'pax', 'Peaxi162Scf00280g00811' => 'pax', 'Peaxi162Scf00310g00615' => 'pax', 'Peaxi162Scf00362g00542' => 'pax', 'Peaxi162Scf00461g00310' => 'pax', 'Peaxi162Scf00530g00118' => 'pax', 'Peaxi162Scf00541g00057' => 'pax', 'Peaxi162Scf00661g00017' => 'pax', 'Peaxi162Scf00926g00027' => 'pax', 'Peaxi162Scf01064g00263' => 'pax', 'Peaxi162Scf01211g00135' => 'pax', 'PGR004G2336' => 'pgr', 'PGR042G0327' => 'pgr', 'PGR042G1957' => 'pgr', 'PGR042G2003' => 'pgr', 'PGR042G3929' => 'pgr', 'PGR083G1137' => 'pgr', 'PGR083G1364' => 'pgr', 'PGSC0003DMG400003381' => 'stu', 'PGSC0003DMG400003417' => 'stu', 'PGSC0003DMG400008981' => 'stu', 'PGSC0003DMG400012417' => 'stu', 'PGSC0003DMG400012823' => 'stu', 'PGSC0003DMG400016885' => 'stu', 'PGSC0003DMG400022812' => 'stu', 'PGSC0003DMG400029726' => 'stu', 'PGSC0003DMG401009243' => 'stu', 'PGSC0003DMG401031505' => 'stu', 'PGSC0003DMG402031505' => 'stu', 'Phvul.001G017600' => 'pvu', 'Phvul.002G193500' => 'pvu', 'Phvul.002G228900' => 'pvu', 'Phvul.002G236800' => 'pvu', 'Phvul.003G049500' => 'pvu', 'Phvul.005G072000' => 'pvu', 'Phvul.006G164800' => 'pvu', 'Phvul.006G185100' => 'pvu', 'Phvul.007G090000' => 'pvu', 'Potri.001G399800' => 'ptr', 'Potri.002G149900' => 'ptr', 'Potri.004G044100' => 'ptr', 'Potri.004G177600' => 'ptr', 'Potri.009G138000' => 'ptr', 'Potri.010G094000' => 'ptr', 'Potri.011G053000' => 'ptr', 'Potri.011G119300' => 'ptr', 'Potri.013G113700' => 'ptr', 'Potri.018G107800' => 'ptr', 'Potri.019G084100' => 'ptr', 'Pp3c14_23720' => 'ppa', 'Pp3c16_6340' => 'ppa', 'Pp3c23_13420' => 'ppa', 'Pp3c24_2740' => 'ppa', 'Pp3c25_860' => 'ppa', 'Pp3c8_21750' => 'ppa', 'Prupe.1G273000' => 'ppe', 'Prupe.1G273700' => 'ppe', 'Prupe.1G274100' => 'ppe', 'Prupe.2G023300' => 'ppe', 'Prupe.4G048000' => 'ppe', 'Prupe.4G080400' => 'ppe', 'Prupe.4G181200' => 'ppe', 'Prupe.8G056900' => 'ppe', 'Prupe.8G168700' => 'ppe', 'Psat1g189080' => 'psa', 'Psat1g204760' => 'psa', 'Psat4g175560' => 'psa', 'Psat4g177720' => 'psa', 'Psat5g244240' => 'psa', 'Psat6g010720' => 'psa', 'Psat6g187200' => 'psa', 'Psat7g072040' => 'psa', 'PSO017G3501' => 'pso', 'PSO063G2148' => 'pso', 'PSO063G5608' => 'pso', 'PSO210G6392' => 'pso', 'PSO541G2319' => 'pso', 'PSO541G2836' => 'pso', 'PSO541G4012' => 'pso', 'PSO541G6253' => 'pso', 'PSO675G0580' => 'pso', 'PSO675G0856' => 'pso', 'PSO675G5635' => 'pso', 'PSO675G9157' => 'pso', 'PSO832G1660' => 'pso', 'PSO832G1969' => 'pso', 'QL02p007186' => 'qlo', 'QL02p033904' => 'qlo', 'QL03p064391' => 'qlo', 'QL05p040593' => 'qlo', 'QL05p058242' => 'qlo', 'QL08p021825' => 'qlo', 'QL11p004981' => 'qlo', 'RcHm_v2.0_Chr1g0318301' => 'rch', 'RcHm_v2.0_Chr4g0418501' => 'rch', 'RcHm_v2.0_Chr4g0439971' => 'rch', 'RcHm_v2.0_Chr5g0008541' => 'rch', 'RcHm_v2.0_Chr5g0014101' => 'rch', 'RcHm_v2.0_Chr5g0014131' => 'rch', 'RcHm_v2.0_Chr5g0033621' => 'rch', 'RcHm_v2.0_Chr6g0272041' => 'rch', 'RcHm_v2.0_Chr6g0278831' => 'rch', 'Rhsim02G0130400' => 'rsi', 'Rhsim02G0171100' => 'rsi', 'Rhsim05G0053000' => 'rsi', 'Rhsim05G0053100' => 'rsi', 'Rhsim06G0096500' => 'rsi', 'Rhsim06G0096600' => 'rsi', 'Rhsim06G0199100' => 'rsi', 'Rhsim12G0062300' => 'rsi', 'Rhsim12G0062800' => 'rsi', 'Sabra02G0118600' => 'sbr', 'Sabra04G0027300' => 'sbr', 'Sabra04G0119500' => 'sbr', 'Sabra08G0112500' => 'sbr', 'Sabra11G0036800' => 'sbr', 'Sabra11G0103800' => 'sbr', 'Sabra13G0096300' => 'sbr', 'Sabra16G0262300' => 'sbr', 'Sabra18G0091700' => 'sbr', 'Sabra19G0095400' => 'sbr', 'SalBow6G3080' => 'sbo', 'SalBow7G1157' => 'sbo', 'SalBow7G2123' => 'sbo', 'SalBow7G2285' => 'sbo', 'SalBow7G3537' => 'sbo', 'SalBow8G2947' => 'sbo', 'SalBow8G4463' => 'sbo', 'SalBow8G5466' => 'sbo', 'Sc01g0001750' => 'sci', 'Sc02g0006640' => 'sci', 'Sc02g0006670' => 'sci', 'Sc04g0008220' => 'sci', 'Sc05g0006190' => 'sci', 'Sc08g0002760' => 'sci', 'Sc17g0006170' => 'sci', 'Sc22g0002050' => 'sci', 'Sc23g0001190' => 'sci', 'Sc24g0000980' => 'sci', 'Sed0006245' => 'sed', 'Sed0007543' => 'sed', 'Sed0009411' => 'sed', 'Sed0010765' => 'sed', 'Sed0012944' => 'sed', 'Sed0014682' => 'sed', 'Sed0016174' => 'sed', 'Sed0016796' => 'sed', 'Sed0020317' => 'sed', 'Sed0021467' => 'sed', 'SEGI_01316' => 'sgi', 'SEGI_03374' => 'sgi', 'SEGI_16265' => 'sgi', 'SEGI_18569' => 'sgi', 'SEGI_20351' => 'sgi', 'SEGI_26395' => 'sgi', 'SEGI_29469' => 'sgi', 'SEGI_34771' => 'sgi', 'SEGI_36769' => 'sgi', 'SEGI_37139' => 'sgi', 'SGA_v2.0_scaffold100G29687' => 'sas', 'SGA_v2.0_scaffold118G32472' => 'sas', 'SGA_v2.0_scaffold14G07051' => 'sas', 'SGA_v2.0_scaffold183G39845' => 'sas', 'SGA_v2.0_scaffold1G00174' => 'sas', 'SGA_v2.0_scaffold22G09714' => 'sas', 'SGA_v2.0_scaffold333G48992' => 'sas', 'SGA_v2.0_scaffold46G17491' => 'sas', 'SGA_v2.0_scaffold49G18294' => 'sas', 'SGA_v2.0_scaffold63G21658' => 'sas', 'SHI01741' => 'shi', 'SHI05771' => 'shi', 'SHI18077' => 'shi', 'SHI20525' => 'shi', 'SHI20527' => 'shi', 'SHI20528' => 'shi', 'SMO172G0185' => 'smo', 'SMO198G0020' => 'smo', 'SMO351G0006' => 'smo', 'SMO356G0118' => 'smo', 'SMO358G0296' => 'smo', 'SMO367G0079' => 'smo', 'SMO367G1277' => 'smo', 'Solyc01g014220.3' => 'sly', 'Solyc01g111770.2' => 'sly', 'Solyc02g078180.3' => 'sly', 'Solyc03g006430.3' => 'sly', 'Solyc03g006456.1' => 'sly', 'Solyc03g079860.2' => 'sly', 'Solyc04g079770.3' => 'sly', 'Solyc05g007430.4' => 'sly', 'Solyc07g063150.3' => 'sly', 'Solyc08g016620.3' => 'sly', 'Solyc09g057590.3' => 'sly', 'Solyc09g057600.1' => 'sly', 'Solyc10g009050.3' => 'sly', 'Solyc11g017420.2' => 'sly', 'Sopen01g053810' => 'spe', 'Sopen02g023040' => 'spe', 'Sopen03g002440' => 'spe', 'Sopen04g033350' => 'spe', 'Sopen05g003310' => 'spe', 'Sopen07g004050' => 'spe', 'Sopen07g031340' => 'spe', 'Sopen08g006990' => 'spe', 'Sopen10g004830' => 'spe', 'Sopen11g009370' => 'spe', 'Sp1g24450' => 'spa', 'Sp1g29670' => 'spa', 'Sp1g39600' => 'spa', 'Sp2g11080' => 'spa', 'Sp2g13970' => 'spa', 'Sp4g16130' => 'spa', 'Sp6g13080' => 'spa', 'Sp7g37270' => 'spa', 'TAR371G0065' => 'tar', 'TAR376G0340' => 'tar', 'TAR376G0435' => 'tar', 'TAR381G0002' => 'tar', 'TAR381G1236' => 'tar', 'TAR624G0055' => 'tar', 'TAR624G0324' => 'tar', 'TAR624G0696' => 'tar', 'TAR624G0906' => 'tar', 'TAR625G0107' => 'tar', 'TAR626G0015' => 'tar', 'TAR626G1356' => 'tar', 'TAR627G0888' => 'tar', 'TAR628G0399' => 'tar', 'TAR628G1327' => 'tar', 'TAR629G2831' => 'tar', 'TAR629G2874' => 'tar', 'TAR633G1432' => 'tar', 'TAR633G2771' => 'tar', 'THA.LOC104803394' => 'tha', 'THA.LOC104805153' => 'tha', 'THA.LOC104806784' => 'tha', 'THA.LOC104810473' => 'tha', 'THA.LOC104813100' => 'tha', 'THA.LOC104814215' => 'tha', 'THA.LOC104815554' => 'tha', 'THA.LOC104820544' => 'tha', 'THA.LOC104824754' => 'tha', 'THA.LOC104827717' => 'tha', 'Thecc.02G031400' => 'tca', 'Thecc.02G055900' => 'tca', 'Thecc.02G350800' => 'tca', 'Thecc.06G150900' => 'tca', 'Thecc.06G186600' => 'tca', 'Thecc.07G089600' => 'tca', 'Thecc.08G020400' => 'tca', 'Thecc.08G182100' => 'tca', 'Thhalv10000873m.g' => 'esa', 'Thhalv10004185m.g' => 'esa', 'Thhalv10006981m.g' => 'esa', 'Thhalv10007204m.g' => 'esa', 'Thhalv10011374m.g' => 'esa', 'Thhalv10013482m.g' => 'esa', 'Thhalv10017801m.g' => 'esa', 'Thhalv10024983m.g' => 'esa', 'TPR.G12072' => 'tpr', 'TPR.G15769' => 'tpr', 'TPR.G16504' => 'tpr', 'TPR.G16506' => 'tpr', 'TPR.G24345' => 'tpr', 'TPR.G26666' => 'tpr', 'TPR.G27320' => 'tpr', 'TPR.G31819' => 'tpr', 'TPR.G38879' => 'tpr', 'TPR.G39015' => 'tpr', 'TPR.G8819' => 'tpr', 'TWI09G0924' => 'twi', 'TWI12G0811' => 'twi', 'TWI12G1294' => 'twi', 'TWI31G0150' => 'twi', 'TWI36G1262' => 'twi', 'TWI38G1287' => 'twi', 'TWI38G1633' => 'twi', 'TWI38G1982' => 'twi', 'TWI39G0116' => 'twi', 'TWI60G1011' => 'twi', 'TWI63G0171' => 'twi', 'TWI73G0839' => 'twi', 'TWI79G1511' => 'twi', 'unitig_0.g915' => 'ugi', 'unitig_0.g916' => 'ugi', 'unitig_21.g20219' => 'ugi', 'unitig_21.g20416' => 'ugi', 'unitig_578.g16132' => 'ugi', 'unitig_578.g16718' => 'ugi', 'unitig_62.g23481' => 'ugi', 'unitig_744.g24535' => 'ugi', 'unitig_749.g13525' => 'ugi', 'vmacro01248' => 'vma', 'vmacro02290' => 'vma', 'vmacro10946' => 'vma', 'vmacro11865' => 'vma', 'vmacro12493' => 'vma', 'vmacro17322' => 'vma', 'vmacro21599' => 'vma', 'vmacro23041' => 'vma', 'VMungo0251G0004' => 'vmu', 'VMungo0251G2639' => 'vmu', 'VMungo0251G2967' => 'vmu', 'VMungo0540G0864' => 'vmu', 'VMungo0540G1569' => 'vmu', 'VMungo0647G0317' => 'vmu', 'VMungo0720G1373' => 'vmu', 'VMungo0720G1508' => 'vmu', 'VMungo1080G0485' => 'vmu', 'VMungo1215G3177' => 'vmu', 'Zm00001eb112600' => 'zma', 'Zm00001eb120220' => 'zma', 'Zm00001eb153240' => 'zma', 'Zm00001eb168880' => 'zma', 'Zm00001eb213920' => 'zma', 'Zm00001eb228280' => 'zma', 'Zm00001eb254580' => 'zma', 'Zm00001eb272180' => 'zma', 'Zm00001eb293190' => 'zma', 'Zm00001eb322930' => 'zma', 'Zm00001eb353360' => 'zma', 'Zm00001eb353390' => 'zma', 'Zm00001eb353430' => 'zma', 'Zm00001eb353440' => 'zma', 'Zm00001eb353780' => 'zma' ), 'gf_id' => 'HOM05D000499', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000499' ), 'data_identifier' => 'HOM05D000499', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000499', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1066', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p29780' => 'bna', 'A02p33180' => 'bna', 'A03p16470' => 'bna', 'A03p66010' => 'bna', 'A04p25970' => 'bna', 'A06p01270' => 'bna', 'A06p46080' => 'bna', 'A07p11400' => 'bna', 'A08p01840' => 'bna', 'A08p08230' => 'bna', 'A08p25740' => 'bna', 'A09p32070' => 'bna', 'A09p37830' => 'bna', 'A09p42840' => 'bna', 'A09p42850' => 'bna', 'Aa31LG10G2060' => 'aar', 'Aa31LG2G7410' => 'aar', 'Aa31LG6G10200' => 'aar', 'Aa31LG6G16680' => 'aar', 'Aa31LG6G8470' => 'aar', 'Aa31LG9G12730' => 'aar', 'Aa31LG9G13680' => 'aar', 'Aa31LG9G14920' => 'aar', 'Aa31LG9G6650' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4977' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5467' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3254' => 'aag', 'Actinidia02578' => 'ach', 'Actinidia07693' => 'ach', 'Actinidia08413' => 'ach', 'Actinidia08414' => 'ach', 'Actinidia15289' => 'ach', 'Actinidia19871' => 'ach', 'Actinidia21475' => 'ach', 'Actinidia22576' => 'ach', 'Actinidia28327' => 'ach', 'Actinidia32491' => 'ach', 'Actinidia39463' => 'ach', 'Actinidia39571' => 'ach', 'Ah.01g013750' => 'amhyb', 'Ah.01g023210' => 'amhyb', 'Ah.04g164850' => 'amhyb', 'Ah.05g178060' => 'amhyb', 'Ah.07g204270' => 'amhyb', 'Ah.07g208480' => 'amhyb', 'Ah.09g237410' => 'amhyb', 'Ah.14g089460' => 'amhyb', 'AL1G41790' => 'aly', 'AL1G49050' => 'aly', 'AL1G53810' => 'aly', 'AL1G61400' => 'aly', 'AL4G18580' => 'aly', 'AL5G12510' => 'aly', 'AL5G12540' => 'aly', 'AL6G43230' => 'aly', 'AL7G10370' => 'aly', 'AL7G19250' => 'aly', 'AL8G12240' => 'aly', 'AL8G18540' => 'aly', 'Aqoxy1G02409' => 'aox', 'Aqoxy2G03993' => 'aox', 'Aqoxy3G03357' => 'aox', 'Aqoxy4G00785' => 'aox', 'Aqoxy5G02598' => 'aox', 'Aqoxy6G00132' => 'aox', 'Aqoxy7G01776' => 'aox', 'Aqoxy7G02316' => 'aox', 'Aqoxy7G03973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.12AFKW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B8730' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27IQR1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3F75VG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3RE0GA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41TCQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.527VTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FIR39' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5W8UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DA38EV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ63HS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H1I32C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HC27T5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4M8AP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7N3CZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9UVDZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LS1NQA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT1D4B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SKC4TM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCFV76' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF9Q1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQWD9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1ZM88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WE07RT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YCK7VH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJE6Q6' => 'arhy', 'AT1G28240' => 'ath', 'AT1G34550' => 'ath', 'AT1G53040' => 'ath', 'AT2G02910' => 'ath', 'AT4G09630' => 'ath', 'AT4G38500' => 'ath', 'AT5G42660' => 'ath', 'AT5G46220' => 'ath', 'ATR0152G026' => 'atr', 'ATR0564G343' => 'atr', 'ATR0706G151' => 'atr', 'ATR0733G207' => 'atr', 'ATR0751G234' => 'atr', 'ATR0807G048' => 'atr', 'ATR1091G084' => 'atr', 'Atru.chr10.1229' => 'acertr', 'Atru.chr10.1230' => 'acertr', 'Atru.chr10.1874' => 'acertr', 'Atru.chr11.1808' => 'acertr', 'Atru.chr13.1795' => 'acertr', 'Atru.chr13.570' => 'acertr', 'Atru.chr2.2608' => 'acertr', 'Atru.chr2.2609' => 'acertr', 'Atru.chr5.3428' => 'acertr', 'Atru.chr8.1171' => 'acertr', 'AUR62004651' => 'cqu', 'AUR62008675' => 'cqu', 'AUR62010014' => 'cqu', 'AUR62013004' => 'cqu', 'AUR62014825' => 'cqu', 'AUR62015015' => 'cqu', 'AUR62015151' => 'cqu', 'AUR62017020' => 'cqu', 'AUR62019422' => 'cqu', 'AUR62023570' => 'cqu', 'AUR62025571' => 'cqu', 'AUR62029098' => 'cqu', 'AUR62033863' => 'cqu', 'AUR62034296' => 'cqu', 'AUR62040075' => 'cqu', 'BcaB02g07334' => 'bca', 'BcaB02g10575' => 'bca', 'BcaB03g12119' => 'bca', 'BcaB03g12120' => 'bca', 'BcaB03g13945' => 'bca', 'BcaB04g17123' => 'bca', 'BcaB04g17867' => 'bca', 'BcaB04g19839' => 'bca', 'BcaB07g30317' => 'bca', 'BcaB07g32432' => 'bca', 'BcaB07g33362' => 'bca', 'BcaB08g36611' => 'bca', 'BcaC01g00028' => 'bca', 'BcaC01g01356' => 'bca', 'BcaC01g02034' => 'bca', 'BcaC01g06051' => 'bca', 'BcaC03g16839' => 'bca', 'BcaC03g17176' => 'bca', 'BcaC05g26829' => 'bca', 'BcaC06g31490' => 'bca', 'BcaC06g35344' => 'bca', 'BcaC06g36570' => 'bca', 'BcaC07g37537' => 'bca', 'BcaC08g43491' => 'bca', 'BcaC08g43773' => 'bca', 'BcaNung00234' => 'bca', 'BcaNung01982' => 'bca', 'BcaNung03707' => 'bca', 'BcaNung06454' => 'bca', 'BolC2t10762H' => 'bol', 'BolC2t11191H' => 'bol', 'BolC3t14322H' => 'bol', 'BolC3t19747H' => 'bol', 'BolC3t21425H' => 'bol', 'BolC4t27800H' => 'bol', 'BolC5t31423H' => 'bol', 'BolC6t35951H' => 'bol', 'BolC6t36282H' => 'bol', 'BolC7t40678H' => 'bol', 'BolC7t40679H' => 'bol', 'BolC7t42222H' => 'bol', 'BolC7t43492H' => 'bol', 'BolC7t46785H' => 'bol', 'BolC8t47853H' => 'bol', 'BolC9t56805H' => 'bol', 'BraA02t08000Z' => 'bra', 'BraA02t08341Z' => 'bra', 'BraA03t10936Z' => 'bra', 'BraA03t15657Z' => 'bra', 'BraA04t18100Z' => 'bra', 'BraA05t20523Z' => 'bra', 'BraA06t23353Z' => 'bra', 'BraA06t27473Z' => 'bra', 'BraA06t27769Z' => 'bra', 'BraA07t28928Z' => 'bra', 'BraA08t32236Z' => 'bra', 'BraA08t32841Z' => 'bra', 'BraA08t34524Z' => 'bra', 'BraA09t38742Z' => 'bra', 'BraA09t39295Z' => 'bra', 'C02p47180' => 'bna', 'C02p50990' => 'bna', 'C03p19360' => 'bna', 'C03p74950' => 'bna', 'C03p91000' => 'bna', 'C04p63260' => 'bna', 'C05p27050' => 'bna', 'C06p08750' => 'bna', 'C06p11490' => 'bna', 'C07p02820' => 'bna', 'C07p17180' => 'bna', 'C07p29440' => 'bna', 'C07p63730' => 'bna', 'C09p39260' => 'bna', 'CAN.G1164.34' => 'can', 'CAN.G1164.39' => 'can', 'CAN.G1530.3' => 'can', 'CAN.G162.61' => 'can', 'CAN.G176.6' => 'can', 'CAN.G289.49' => 'can', 'CAN.G370.21' => 'can', 'CAN.G370.22' => 'can', 'CAN.G371.117' => 'can', 'CAN.G58.37' => 'can', 'CAN.G588.98' => 'can', 'CANSAT21G2266' => 'cansat', 'CANSAT25G2799' => 'cansat', 'CANSAT35G0862' => 'cansat', 'CANSAT35G1704' => 'cansat', 'CANSAT35G1760' => 'cansat', 'CANSAT56G3971' => 'cansat', 'CANSAT56G4116' => 'cansat', 'CANSAT80G1259' => 'cansat', 'CARHR027730' => 'chi', 'CARHR033880' => 'chi', 'CARHR043270' => 'chi', 'CARHR145330' => 'chi', 'CARHR145340' => 'chi', 'CARHR175570' => 'chi', 'CARHR181570' => 'chi', 'CARHR258470' => 'chi', 'CARHR260490' => 'chi', 'CARHR294220' => 'chi', 'Carub.0001s2668' => 'cru', 'Carub.0001s3257' => 'cru', 'Carub.0001s4220' => 'cru', 'Carub.0005s0179' => 'cru', 'Carub.0006s2807' => 'cru', 'Carub.0007s0039' => 'cru', 'Carub.0008s0169' => 'cru', 'Carub.0008s0636' => 'cru', 'Ca_00338_v3' => 'car', 'Ca_00542_v3' => 'car', 'Ca_01844_v3' => 'car', 'Ca_10611_v3' => 'car', 'Ca_13326_v3' => 'car', 'Ca_17944_v3' => 'car', 'Ca_18546_v3' => 'car', 'Ca_24219_v3' => 'car', 'Ca_29972_v3' => 'car', 'CBR_g3681' => 'cbr', 'CBR_g40021' => 'cbr', 'Cc01_g08140' => 'ccan', 'Cc02_g13410' => 'ccan', 'Cc02_g37480' => 'ccan', 'Cc05_g12030' => 'ccan', 'Cc09_g03370' => 'ccan', 'Cc09_g10300' => 'ccan', 'Cc10_g03530' => 'ccan', 'Cc10_g11380' => 'ccan', 'CDE01G0176' => 'cde', 'CDE02G0675' => 'cde', 'CDE02G0942' => 'cde', 'CDE02G1153' => 'cde', 'CDE02G4177' => 'cde', 'CDE04G2117' => 'cde', 'CDE04G2736' => 'cde', 'CDE08G1161' => 'cde', 'CDE09G1238' => 'cde', 'Cfa000467' => 'cfa', 'Cfa000947' => 'cfa', 'Cfa004969' => 'cfa', 'Cfa005284' => 'cfa', 'Cfa008993' => 'cfa', 'Cfa018187' => 'cfa', 'Cfa018454' => 'cfa', 'Cfa020585' => 'cfa', 'Ciclev10000424m.g' => 'ccl', 'Ciclev10003605m.g' => 'ccl', 'Ciclev10007828m.g' => 'ccl', 'Ciclev10014620m.g' => 'ccl', 'Ciclev10015169m.g' => 'ccl', 'Ciclev10018291m.g' => 'ccl', 'Ciclev10028256m.g' => 'ccl', 'Ciclev10033822m.g' => 'ccl', 'CiPaw.05G060300' => 'cil', 'CiPaw.05G085000' => 'cil', 'CiPaw.06G083700' => 'cil', 'CiPaw.06G120300' => 'cil', 'CiPaw.09G060500' => 'cil', 'CiPaw.09G123800' => 'cil', 'CiPaw.11G169700' => 'cil', 'CiPaw.12G118300' => 'cil', 'CiPaw.15G071000' => 'cil', 'CiPaw.15G081900' => 'cil', 'ClCG01G024610' => 'cla', 'ClCG03G006070' => 'cla', 'ClCG05G019250' => 'cla', 'ClCG09G009500' => 'cla', 'ClCG11G008200' => 'cla', 'ClCG11G018080' => 'cla', 'COL.COLO4_17373' => 'col', 'COL.COLO4_22994' => 'col', 'COL.COLO4_26389' => 'col', 'COL.COLO4_27170' => 'col', 'COL.COLO4_31074' => 'col', 'COL.COLO4_31465' => 'col', 'COL.COLO4_36438' => 'col', 'COL.COLO4_36439' => 'col', 'Cpa.g.c38781' => 'cpa', 'Cpa.g.sc128.12' => 'cpa', 'Cpa.g.sc166.7' => 'cpa', 'Cpa.g.sc166.8' => 'cpa', 'Cpa.g.sc20.111' => 'cpa', 'Cpa.g.sc27.31' => 'cpa', 'Cpa.g.sc64.36' => 'cpa', 'Cpa.g.sc64.37' => 'cpa', 'Cpa.g.sc66.49' => 'cpa', 'Cpa.g.sc80.64' => 'cpa', 'CsaV3_1G012320' => 'csa', 'CsaV3_2G008480' => 'csa', 'CsaV3_2G033450' => 'csa', 'CsaV3_3G044830' => 'csa', 'CsaV3_4G033710' => 'csa', 'CsaV3_6G051730' => 'csa', 'CsaV3_7G025350' => 'csa', 'CSS0001067' => 'camsi', 'CSS0005996' => 'camsi', 'CSS0006590' => 'camsi', 'CSS0009673' => 'camsi', 'CSS0010201' => 'camsi', 'CSS0010549' => 'camsi', 'CSS0011364' => 'camsi', 'CSS0014473' => 'camsi', 'CSS0014961' => 'camsi', 'CSS0020191' => 'camsi', 'CSS0021165' => 'camsi', 'CSS0022306' => 'camsi', 'CSS0030591' => 'camsi', 'CSS0030696' => 'camsi', 'CSS0032653' => 'camsi', 'CSS0037487' => 'camsi', 'CSS0041102' => 'camsi', 'CSS0041261' => 'camsi', 'CSS0046246' => 'camsi', 'CSS0049256' => 'camsi', 'DCAR_004075' => 'dca', 'DCAR_011538' => 'dca', 'DCAR_019553' => 'dca', 'DCAR_020952' => 'dca', 'DCAR_021739' => 'dca', 'DCAR_027407' => 'dca', 'DCAR_027913' => 'dca', 'DCAR_028066' => 'dca', 'Dinv05899' => 'din', 'Dinv07563' => 'din', 'Dinv08010' => 'din', 'Dinv14125' => 'din', 'Dinv20172' => 'din', 'Dinv30743' => 'din', 'Dinv31229' => 'din', 'Dinv34162' => 'din', 'Dinv36028' => 'din', 'Dinv39368' => 'din', 'Dinv40565' => 'din', 'Dinv41706' => 'din', 'Duzib052G0089' => 'dzi', 'Duzib116G0641' => 'dzi', 'Duzib132G0069' => 'dzi', 'Duzib132G1219' => 'dzi', 'Duzib147G0278' => 'dzi', 'Duzib160G0480' => 'dzi', 'Duzib170G0661' => 'dzi', 'Duzib177G0591' => 'dzi', 'Duzib187G1353' => 'dzi', 'Duzib192G0858' => 'dzi', 'Duzib192G0883' => 'dzi', 'Duzib213G0506' => 'dzi', 'Duzib235G0289' => 'dzi', 'Duzib251G0422' => 'dzi', 'ECA232G3898' => 'eca', 'ECA233G5950' => 'eca', 'ECA234G1699' => 'eca', 'ECA234G2421' => 'eca', 'ECA236G0426' => 'eca', 'ECA236G4331' => 'eca', 'ECA248G2573' => 'eca', 'EL10Ac1g00077' => 'bvu', 'EL10Ac1g01746' => 'bvu', 'EL10Ac2g03464' => 'bvu', 'EL10Ac4g08176' => 'bvu', 'EL10Ac7g17521' => 'bvu', 'EL10Ac8g20386' => 'bvu', 'EL10Ac9g21343' => 'bvu', 'EL10Ac9g22688' => 'bvu', 'Eucgr.B03434' => 'egr', 'Eucgr.D00618' => 'egr', 'Eucgr.E02395' => 'egr', 'Eucgr.F01129' => 'egr', 'Eucgr.F02622' => 'egr', 'Eucgr.F04207' => 'egr', 'FAN01G0570' => 'fan', 'FAN03G3351' => 'fan', 'FAN06G3702' => 'fan', 'FAN07G2149' => 'fan', 'FAN10G3758' => 'fan', 'FAN11G1170' => 'fan', 'FAN11G2050' => 'fan', 'FAN11G2724' => 'fan', 'FAN12G1700' => 'fan', 'FAN12G2028' => 'fan', 'FAN15G1160' => 'fan', 'FAN15G3063' => 'fan', 'FAN16G2540' => 'fan', 'FAN16G3077' => 'fan', 'FAN16G3624' => 'fan', 'FAN17G0221' => 'fan', 'FAN20G2492' => 'fan', 'FAN20G2905' => 'fan', 'FAN21G0548' => 'fan', 'FAN21G1300' => 'fan', 'FAN22G0077' => 'fan', 'FAN22G1315' => 'fan', 'FAN24G1280' => 'fan', 'FAN24G1445' => 'fan', 'FAN24G3527' => 'fan', 'FAN25G0464' => 'fan', 'FAN25G2885' => 'fan', 'FAN25G3270' => 'fan', 'FAN27G1101' => 'fan', 'FAN27G2846' => 'fan', 'FAN27G3524' => 'fan', 'FvH4_2g11770' => 'fve', 'FvH4_2g15630' => 'fve', 'FvH4_3g05570' => 'fve', 'FvH4_3g09110' => 'fve', 'FvH4_3g19940' => 'fve', 'FvH4_4g04821' => 'fve', 'FvH4_4g31480' => 'fve', 'FvH4_7g01740' => 'fve', 'Glyma.05G130400' => 'gma', 'Glyma.05G156400' => 'gma', 'Glyma.07G197000' => 'gma', 'Glyma.08G085151' => 'gma', 'Glyma.08G114500' => 'gma', 'Glyma.08G300400' => 'gma', 'Glyma.10G215800' => 'gma', 'Glyma.12G224400' => 'gma', 'Glyma.13G179300' => 'gma', 'Glyma.13G218151' => 'gma', 'Glyma.13G238800' => 'gma', 'Glyma.13G276900' => 'gma', 'Glyma.14G078200' => 'gma', 'Glyma.15G074500' => 'gma', 'Glyma.15G094100' => 'gma', 'Glyma.17G247200' => 'gma', 'Glyma.18G120100' => 'gma', 'Glyma.20G176000' => 'gma', 'Gohir.A01G063600' => 'ghi', 'Gohir.A01G170301' => 'ghi', 'Gohir.A02G060500' => 'ghi', 'Gohir.A05G133850' => 'ghi', 'Gohir.A05G161400' => 'ghi', 'Gohir.A06G012900' => 'ghi', 'Gohir.A06G035901' => 'ghi', 'Gohir.A06G127100' => 'ghi', 'Gohir.A06G210500' => 'ghi', 'Gohir.A08G008650' => 'ghi', 'Gohir.A09G072700' => 'ghi', 'Gohir.A09G088301' => 'ghi', 'Gohir.A10G040600' => 'ghi', 'Gohir.A12G036300' => 'ghi', 'Gohir.A12G143350' => 'ghi', 'Gohir.A12G165500' => 'ghi', 'Gohir.A13G145700' => 'ghi', 'Gohir.D01G050000' => 'ghi', 'Gohir.D01G051366' => 'ghi', 'Gohir.D01G161350' => 'ghi', 'Gohir.D02G065900' => 'ghi', 'Gohir.D05G164200' => 'ghi', 'Gohir.D05G355500' => 'ghi', 'Gohir.D06G010400' => 'ghi', 'Gohir.D06G111250' => 'ghi', 'Gohir.D06G132000' => 'ghi', 'Gohir.D06G210500' => 'ghi', 'Gohir.D07G165675' => 'ghi', 'Gohir.D08G062240' => 'ghi', 'Gohir.D08G086101' => 'ghi', 'Gohir.D08G138060' => 'ghi', 'Gohir.D09G072300' => 'ghi', 'Gohir.D10G041400' => 'ghi', 'Gohir.D11G191020' => 'ghi', 'Gohir.D11G212066' => 'ghi', 'Gohir.D12G036300' => 'ghi', 'Gohir.D12G168600' => 'ghi', 'Gohir.D13G150600' => 'ghi', 'Gorai.001G057300' => 'gra', 'Gorai.002G069900' => 'gra', 'Gorai.002G200000' => 'gra', 'Gorai.003G067600' => 'gra', 'Gorai.005G074800' => 'gra', 'Gorai.006G087300' => 'gra', 'Gorai.008G037500' => 'gra', 'Gorai.008G181400' => 'gra', 'Gorai.009G169400' => 'gra', 'Gorai.009G387900' => 'gra', 'Gorai.010G013300' => 'gra', 'Gorai.010G153800' => 'gra', 'Gorai.010G255800' => 'gra', 'Gorai.011G043700' => 'gra', 'Gorai.011G198900' => 'gra', 'Gorai.013G168400' => 'gra', 'GSVIVG01005212001' => 'vvi', 'GSVIVG01006163001' => 'vvi', 'GSVIVG01009625001' => 'vvi', 'GSVIVG01014338001' => 'vvi', 'GSVIVG01020005001' => 'vvi', 'GSVIVG01021450001' => 'vvi', 'GSVIVG01023975001' => 'vvi', 'GSVIVG01034490001' => 'vvi', 'HanXRQChr04g0112071' => 'han', 'HanXRQChr05g0131151' => 'han', 'HanXRQChr09g0262371' => 'han', 'HanXRQChr09g0268401' => 'han', 'HanXRQChr10g0279241' => 'han', 'HanXRQChr10g0297961' => 'han', 'HanXRQChr11g0326231' => 'han', 'HanXRQChr11g0328471' => 'han', 'HanXRQChr16g0507941' => 'han', 'HanXRQChr17g0560211' => 'han', 'Haze_02108' => 'cav', 'Haze_02428' => 'cav', 'Haze_05593' => 'cav', 'Haze_06448' => 'cav', 'Haze_09427' => 'cav', 'Haze_12022' => 'cav', 'Haze_17612' => 'cav', 'Haze_17928' => 'cav', 'Hma1.2p1_0032F.1_g019250' => 'hma', 'Hma1.2p1_0163F.1_g072690' => 'hma', 'Hma1.2p1_0265F.1_g106710' => 'hma', 'Hma1.2p1_0286F.1_g113970' => 'hma', 'Hma1.2p1_0363F.1_g136640' => 'hma', 'Hma1.2p1_0584F.1_g183470' => 'hma', 'Hma1.2p1_0885F.1_g232570' => 'hma', 'HPP92_006022' => 'vpl', 'HPP92_007320' => 'vpl', 'HPP92_011521' => 'vpl', 'HPP92_019387' => 'vpl', 'HPP92_024038' => 'vpl', 'Hund05891' => 'sun', 'Hund06450' => 'sun', 'Hund12053' => 'sun', 'Hund16800' => 'sun', 'Hund21222' => 'sun', 'Hund22896' => 'sun', 'Hund23746' => 'sun', 'Hund27083' => 'sun', 'Lalb_Chr02g0141831' => 'lal', 'Lalb_Chr02g0141841' => 'lal', 'Lalb_Chr05g0220411' => 'lal', 'Lalb_Chr06g0162081' => 'lal', 'Lalb_Chr09g0327651' => 'lal', 'Lalb_Chr13g0295051' => 'lal', 'Lalb_Chr15g0086801' => 'lal', 'Lalb_Chr16g0383781' => 'lal', 'Lalb_Chr16g0383791' => 'lal', 'Lalb_Chr18g0055441' => 'lal', 'Lalb_Chr18g0059611' => 'lal', 'Lalb_Chr20g0109661' => 'lal', 'Lalb_Chr20g0109831' => 'lal', 'Lalb_Chr20g0121871' => 'lal', 'Lalb_Chr22g0355361' => 'lal', 'Lalb_Chr25g0286371' => 'lal', 'Lj1A1187G43' => 'lonja', 'Lj1A1205T50' => 'lonja', 'Lj1A800G33' => 'lonja', 'Lj1C1187T7' => 'lonja', 'Lj1C843T11' => 'lonja', 'Lj1g0010940' => 'lja', 'Lj2A288T69' => 'lonja', 'Lj3g0024276' => 'lja', 'Lj4A47T76' => 'lonja', 'Lj4g0005805' => 'lja', 'Lj4g0006097' => 'lja', 'Lj4g0008528' => 'lja', 'Lj4g0024907' => 'lja', 'Lj5g0012472' => 'lja', 'Lj5g0018648' => 'lja', 'Lj6C789G1' => 'lonja', 'Lj6g0004000' => 'lja', 'Lj7A292G67' => 'lonja', 'Lj7A292T64' => 'lonja', 'Lj9A400T58' => 'lonja', 'Lsat_1_v5_gn_1_126181' => 'lsa', 'Lsat_1_v5_gn_4_123041' => 'lsa', 'Lsat_1_v5_gn_4_133620' => 'lsa', 'Lsat_1_v5_gn_4_53221' => 'lsa', 'Lsat_1_v5_gn_4_71961' => 'lsa', 'Lsat_1_v5_gn_7_105241' => 'lsa', 'Lsat_1_v5_gn_7_21361' => 'lsa', 'Lsat_1_v5_gn_7_28860' => 'lsa', 'Lsat_1_v5_gn_7_31260' => 'lsa', 'Lsat_1_v5_gn_8_52801' => 'lsa', 'Manes.02G191400' => 'mes', 'Manes.03G110100' => 'mes', 'Manes.04G071100' => 'mes', 'Manes.05G100500' => 'mes', 'Manes.05G164700' => 'mes', 'Manes.15G087000' => 'mes', 'Manes.15G121500' => 'mes', 'Manes.16G028300' => 'mes', 'Manes.17G046100' => 'mes', 'Manes.17G069800' => 'mes', 'Manes.18G100500' => 'mes', 'Mapoly0002s0109' => 'mpo', 'Mapoly0024s0007' => 'mpo', 'Mapoly0089s0032' => 'mpo', 'MBI04_g42241_MAGBIO' => 'mbi', 'MBI05_g11988_MAGBIO' => 'mbi', 'MBI05_g35452_MAGBIO' => 'mbi', 'MBI07_g30179_MAGBIO' => 'mbi', 'MBI07_g35859_MAGBIO' => 'mbi', 'MBI07_g35860_MAGBIO' => 'mbi', 'MBI07_g37166_MAGBIO' => 'mbi', 'MBI08_g18172_MAGBIO' => 'mbi', 'MBI09_g08441_MAGBIO' => 'mbi', 'MBI13_g01676_MAGBIO' => 'mbi', 'MBI14_g42955_MAGBIO' => 'mbi', 'MBI16_g13161_MAGBIO' => 'mbi', 'MBI17_g27204_MAGBIO' => 'mbi', 'MBI19_g21595_MAGBIO' => 'mbi', 'MD00G1148400' => 'mdo', 'MD02G1301200' => 'mdo', 'MD03G1227800' => 'mdo', 'MD05G1041100' => 'mdo', 'MD05G1124800' => 'mdo', 'MD05G1284000' => 'mdo', 'MD05G1338800' => 'mdo', 'MD05G1338900' => 'mdo', 'MD07G1022800' => 'mdo', 'MD10G1047500' => 'mdo', 'MD10G1127500' => 'mdo', 'MD10G1262300' => 'mdo', 'MD10G1293800' => 'mdo', 'MD16G1074300' => 'mdo', 'Medtr1g021670' => 'mtr', 'Medtr1g096320' => 'mtr', 'Medtr2g013690' => 'mtr', 'Medtr2g019450' => 'mtr', 'Medtr2g085170' => 'mtr', 'Medtr4g088785' => 'mtr', 'Medtr8g055930' => 'mtr', 'Medtr8g085850' => 'mtr', 'MELO3C002605.2' => 'cme', 'MELO3C003891.2' => 'cme', 'MELO3C004012.2' => 'cme', 'MELO3C007134.2' => 'cme', 'MELO3C008118.2' => 'cme', 'MELO3C016700.2' => 'cme', 'MELO3C024127.2' => 'cme', 'MELO3C033361.2' => 'cme', 'MELO3C033362.2' => 'cme', 'Migut.C00430' => 'egut', 'Migut.C01246' => 'egut', 'Migut.E00101' => 'egut', 'Migut.H01486' => 'egut', 'Migut.H01939' => 'egut', 'Migut.K00360' => 'egut', 'Migut.M00910' => 'egut', 'Migut.M01139' => 'egut', 'Migut.N02677' => 'egut', 'MSTRG.13252' => 'ama', 'MSTRG.14701' => 'ama', 'MSTRG.1521' => 'ama', 'MSTRG.15884' => 'ama', 'MSTRG.16242' => 'ama', 'MSTRG.22285' => 'ama', 'MSTRG.22444' => 'ama', 'MSTRG.2349' => 'ama', 'MSTRG.26308' => 'ama', 'MSTRG.28296' => 'ama', 'MSTRG.9895' => 'ama', 'Nitab4.5_0000110g0060' => 'nta', 'Nitab4.5_0000420g0130' => 'nta', 'Nitab4.5_0000422g0030' => 'nta', 'Nitab4.5_0000560g0180' => 'nta', 'Nitab4.5_0000703g0100' => 'nta', 'Nitab4.5_0000786g0200' => 'nta', 'Nitab4.5_0001336g0020' => 'nta', 'Nitab4.5_0001796g0030' => 'nta', 'Nitab4.5_0003348g0060' => 'nta', 'Nitab4.5_0003698g0040' => 'nta', 'Nitab4.5_0003942g0090' => 'nta', 'Nitab4.5_0004775g0070' => 'nta', 'Nitab4.5_0004864g0030' => 'nta', 'Nitab4.5_0005615g0020' => 'nta', 'Nitab4.5_0009288g0030' => 'nta', 'Nitab4.5_0009341g0010' => 'nta', 'Nitab4.5_0009535g0010' => 'nta', 'Nn1g03995' => 'nnu', 'Nn1g04100' => 'nnu', 'Nn1g06530' => 'nnu', 'Nn3g16404' => 'nnu', 'Nn3g17212' => 'nnu', 'Nn3g20776' => 'nnu', 'Nn3g21923' => 'nnu', 'Nn5g27737' => 'nnu', 'Nn5g29461' => 'nnu', 'Nn7g38355' => 'nnu', 'Nn8g39873' => 'nnu', 'Oeu000548.2' => 'oeu', 'Oeu004672.1' => 'oeu', 'Oeu015605.2' => 'oeu', 'Oeu016092.1' => 'oeu', 'Oeu017879.3' => 'oeu', 'Oeu024910.1' => 'oeu', 'Oeu028965.1' => 'oeu', 'Oeu031269.1' => 'oeu', 'Oeu031270.1' => 'oeu', 'Oeu032535.1' => 'oeu', 'Oeu034151.1' => 'oeu', 'Oeu034152.1' => 'oeu', 'Oeu034588.2' => 'oeu', 'Oeu050846.1' => 'oeu', 'Oeu050849.2' => 'oeu', 'Oeu051063.2' => 'oeu', 'Oeu052368.1' => 'oeu', 'Oeu052370.1' => 'oeu', 'Os01g0210400' => 'osa', 'Os01g0304300' => 'osa', 'Os01g0749100' => 'osa', 'Os02g0745800' => 'osa', 'Os03g0769050' => 'osa', 'Os05g0531500' => 'osa', 'Os06g0724300' => 'osa', 'Os11g0198100' => 'osa', 'Peaxi162Scf00069g01425' => 'pax', 'Peaxi162Scf00280g00811' => 'pax', 'Peaxi162Scf00310g00615' => 'pax', 'Peaxi162Scf00362g00542' => 'pax', 'Peaxi162Scf00461g00310' => 'pax', 'Peaxi162Scf00530g00118' => 'pax', 'Peaxi162Scf00541g00057' => 'pax', 'Peaxi162Scf00661g00017' => 'pax', 'Peaxi162Scf00926g00027' => 'pax', 'Peaxi162Scf01064g00263' => 'pax', 'Peaxi162Scf01211g00135' => 'pax', 'PGR004G2336' => 'pgr', 'PGR042G0327' => 'pgr', 'PGR042G1957' => 'pgr', 'PGR042G2003' => 'pgr', 'PGR042G3929' => 'pgr', 'PGR083G1137' => 'pgr', 'PGR083G1364' => 'pgr', 'PGSC0003DMG400003381' => 'stu', 'PGSC0003DMG400003417' => 'stu', 'PGSC0003DMG400008981' => 'stu', 'PGSC0003DMG400012417' => 'stu', 'PGSC0003DMG400012823' => 'stu', 'PGSC0003DMG400016885' => 'stu', 'PGSC0003DMG400022812' => 'stu', 'PGSC0003DMG400029726' => 'stu', 'PGSC0003DMG401009243' => 'stu', 'PGSC0003DMG401031505' => 'stu', 'PGSC0003DMG402031505' => 'stu', 'Phvul.001G017600' => 'pvu', 'Phvul.002G193500' => 'pvu', 'Phvul.002G228900' => 'pvu', 'Phvul.002G236800' => 'pvu', 'Phvul.003G049500' => 'pvu', 'Phvul.005G072000' => 'pvu', 'Phvul.006G164800' => 'pvu', 'Phvul.006G185100' => 'pvu', 'Phvul.007G090000' => 'pvu', 'Potri.001G399800' => 'ptr', 'Potri.002G149900' => 'ptr', 'Potri.004G044100' => 'ptr', 'Potri.004G177600' => 'ptr', 'Potri.009G138000' => 'ptr', 'Potri.010G094000' => 'ptr', 'Potri.011G053000' => 'ptr', 'Potri.011G119300' => 'ptr', 'Potri.013G113700' => 'ptr', 'Potri.018G107800' => 'ptr', 'Potri.019G084100' => 'ptr', 'Pp3c14_23720' => 'ppa', 'Pp3c16_6340' => 'ppa', 'Pp3c23_13420' => 'ppa', 'Pp3c24_2740' => 'ppa', 'Pp3c25_860' => 'ppa', 'Pp3c8_21750' => 'ppa', 'Prupe.1G273000' => 'ppe', 'Prupe.1G273700' => 'ppe', 'Prupe.1G274100' => 'ppe', 'Prupe.2G023300' => 'ppe', 'Prupe.4G048000' => 'ppe', 'Prupe.4G080400' => 'ppe', 'Prupe.4G181200' => 'ppe', 'Prupe.8G056900' => 'ppe', 'Prupe.8G168700' => 'ppe', 'Psat1g189080' => 'psa', 'Psat1g204760' => 'psa', 'Psat4g175560' => 'psa', 'Psat4g177720' => 'psa', 'Psat5g244240' => 'psa', 'Psat6g010720' => 'psa', 'Psat6g187200' => 'psa', 'Psat7g072040' => 'psa', 'PSO017G3501' => 'pso', 'PSO063G2148' => 'pso', 'PSO063G5608' => 'pso', 'PSO210G6392' => 'pso', 'PSO541G2319' => 'pso', 'PSO541G2836' => 'pso', 'PSO541G4012' => 'pso', 'PSO541G6253' => 'pso', 'PSO675G0580' => 'pso', 'PSO675G0856' => 'pso', 'PSO675G5635' => 'pso', 'PSO675G9157' => 'pso', 'PSO832G1660' => 'pso', 'PSO832G1969' => 'pso', 'QL02p007186' => 'qlo', 'QL02p033904' => 'qlo', 'QL03p064391' => 'qlo', 'QL05p040593' => 'qlo', 'QL05p058242' => 'qlo', 'QL08p021825' => 'qlo', 'QL11p004981' => 'qlo', 'RcHm_v2.0_Chr1g0318301' => 'rch', 'RcHm_v2.0_Chr4g0418501' => 'rch', 'RcHm_v2.0_Chr4g0439971' => 'rch', 'RcHm_v2.0_Chr5g0008541' => 'rch', 'RcHm_v2.0_Chr5g0014101' => 'rch', 'RcHm_v2.0_Chr5g0014131' => 'rch', 'RcHm_v2.0_Chr5g0033621' => 'rch', 'RcHm_v2.0_Chr6g0272041' => 'rch', 'RcHm_v2.0_Chr6g0278831' => 'rch', 'Rhsim02G0130400' => 'rsi', 'Rhsim02G0171100' => 'rsi', 'Rhsim05G0053000' => 'rsi', 'Rhsim05G0053100' => 'rsi', 'Rhsim06G0096500' => 'rsi', 'Rhsim06G0096600' => 'rsi', 'Rhsim06G0199100' => 'rsi', 'Rhsim12G0062300' => 'rsi', 'Rhsim12G0062800' => 'rsi', 'Sabra02G0118600' => 'sbr', 'Sabra04G0027300' => 'sbr', 'Sabra04G0119500' => 'sbr', 'Sabra08G0112500' => 'sbr', 'Sabra11G0036800' => 'sbr', 'Sabra11G0103800' => 'sbr', 'Sabra13G0096300' => 'sbr', 'Sabra16G0262300' => 'sbr', 'Sabra18G0091700' => 'sbr', 'Sabra19G0095400' => 'sbr', 'SalBow6G3080' => 'sbo', 'SalBow7G1157' => 'sbo', 'SalBow7G2123' => 'sbo', 'SalBow7G2285' => 'sbo', 'SalBow7G3537' => 'sbo', 'SalBow8G2947' => 'sbo', 'SalBow8G4463' => 'sbo', 'SalBow8G5466' => 'sbo', 'Sc01g0001750' => 'sci', 'Sc02g0006640' => 'sci', 'Sc02g0006670' => 'sci', 'Sc04g0008220' => 'sci', 'Sc05g0006190' => 'sci', 'Sc08g0002760' => 'sci', 'Sc17g0006170' => 'sci', 'Sc22g0002050' => 'sci', 'Sc23g0001190' => 'sci', 'Sc24g0000980' => 'sci', 'Sed0006245' => 'sed', 'Sed0007543' => 'sed', 'Sed0009411' => 'sed', 'Sed0010765' => 'sed', 'Sed0012944' => 'sed', 'Sed0014682' => 'sed', 'Sed0016174' => 'sed', 'Sed0016796' => 'sed', 'Sed0020317' => 'sed', 'Sed0021467' => 'sed', 'SEGI_01316' => 'sgi', 'SEGI_03374' => 'sgi', 'SEGI_16265' => 'sgi', 'SEGI_18569' => 'sgi', 'SEGI_20351' => 'sgi', 'SEGI_26395' => 'sgi', 'SEGI_29469' => 'sgi', 'SEGI_34771' => 'sgi', 'SEGI_36769' => 'sgi', 'SEGI_37139' => 'sgi', 'SGA_v2.0_scaffold100G29687' => 'sas', 'SGA_v2.0_scaffold118G32472' => 'sas', 'SGA_v2.0_scaffold14G07051' => 'sas', 'SGA_v2.0_scaffold183G39845' => 'sas', 'SGA_v2.0_scaffold1G00174' => 'sas', 'SGA_v2.0_scaffold22G09714' => 'sas', 'SGA_v2.0_scaffold333G48992' => 'sas', 'SGA_v2.0_scaffold46G17491' => 'sas', 'SGA_v2.0_scaffold49G18294' => 'sas', 'SGA_v2.0_scaffold63G21658' => 'sas', 'SHI01741' => 'shi', 'SHI05771' => 'shi', 'SHI18077' => 'shi', 'SHI20525' => 'shi', 'SHI20527' => 'shi', 'SHI20528' => 'shi', 'SMO172G0185' => 'smo', 'SMO198G0020' => 'smo', 'SMO351G0006' => 'smo', 'SMO356G0118' => 'smo', 'SMO358G0296' => 'smo', 'SMO367G0079' => 'smo', 'SMO367G1277' => 'smo', 'Solyc01g014220.3' => 'sly', 'Solyc01g111770.2' => 'sly', 'Solyc02g078180.3' => 'sly', 'Solyc03g006430.3' => 'sly', 'Solyc03g006456.1' => 'sly', 'Solyc03g079860.2' => 'sly', 'Solyc04g079770.3' => 'sly', 'Solyc05g007430.4' => 'sly', 'Solyc07g063150.3' => 'sly', 'Solyc08g016620.3' => 'sly', 'Solyc09g057590.3' => 'sly', 'Solyc09g057600.1' => 'sly', 'Solyc10g009050.3' => 'sly', 'Solyc11g017420.2' => 'sly', 'Sopen01g053810' => 'spe', 'Sopen02g023040' => 'spe', 'Sopen03g002440' => 'spe', 'Sopen04g033350' => 'spe', 'Sopen05g003310' => 'spe', 'Sopen07g004050' => 'spe', 'Sopen07g031340' => 'spe', 'Sopen08g006990' => 'spe', 'Sopen10g004830' => 'spe', 'Sopen11g009370' => 'spe', 'Sp1g24450' => 'spa', 'Sp1g29670' => 'spa', 'Sp1g39600' => 'spa', 'Sp2g11080' => 'spa', 'Sp2g13970' => 'spa', 'Sp4g16130' => 'spa', 'Sp6g13080' => 'spa', 'Sp7g37270' => 'spa', 'TAR371G0065' => 'tar', 'TAR376G0340' => 'tar', 'TAR376G0435' => 'tar', 'TAR381G0002' => 'tar', 'TAR381G1236' => 'tar', 'TAR624G0055' => 'tar', 'TAR624G0324' => 'tar', 'TAR624G0696' => 'tar', 'TAR624G0906' => 'tar', 'TAR625G0107' => 'tar', 'TAR626G0015' => 'tar', 'TAR626G1356' => 'tar', 'TAR627G0888' => 'tar', 'TAR628G0399' => 'tar', 'TAR628G1327' => 'tar', 'TAR629G2831' => 'tar', 'TAR629G2874' => 'tar', 'TAR633G1432' => 'tar', 'TAR633G2771' => 'tar', 'THA.LOC104803394' => 'tha', 'THA.LOC104805153' => 'tha', 'THA.LOC104806784' => 'tha', 'THA.LOC104810473' => 'tha', 'THA.LOC104813100' => 'tha', 'THA.LOC104814215' => 'tha', 'THA.LOC104815554' => 'tha', 'THA.LOC104820544' => 'tha', 'THA.LOC104824754' => 'tha', 'THA.LOC104827717' => 'tha', 'Thecc.02G031400' => 'tca', 'Thecc.02G055900' => 'tca', 'Thecc.02G350800' => 'tca', 'Thecc.06G150900' => 'tca', 'Thecc.06G186600' => 'tca', 'Thecc.07G089600' => 'tca', 'Thecc.08G020400' => 'tca', 'Thecc.08G182100' => 'tca', 'Thhalv10000873m.g' => 'esa', 'Thhalv10004185m.g' => 'esa', 'Thhalv10006981m.g' => 'esa', 'Thhalv10007204m.g' => 'esa', 'Thhalv10011374m.g' => 'esa', 'Thhalv10013482m.g' => 'esa', 'Thhalv10017801m.g' => 'esa', 'Thhalv10024983m.g' => 'esa', 'TPR.G12072' => 'tpr', 'TPR.G15769' => 'tpr', 'TPR.G16504' => 'tpr', 'TPR.G16506' => 'tpr', 'TPR.G24345' => 'tpr', 'TPR.G26666' => 'tpr', 'TPR.G27320' => 'tpr', 'TPR.G31819' => 'tpr', 'TPR.G38879' => 'tpr', 'TPR.G39015' => 'tpr', 'TPR.G8819' => 'tpr', 'TWI09G0924' => 'twi', 'TWI12G0811' => 'twi', 'TWI12G1294' => 'twi', 'TWI31G0150' => 'twi', 'TWI36G1262' => 'twi', 'TWI38G1287' => 'twi', 'TWI38G1633' => 'twi', 'TWI38G1982' => 'twi', 'TWI39G0116' => 'twi', 'TWI60G1011' => 'twi', 'TWI63G0171' => 'twi', 'TWI73G0839' => 'twi', 'TWI79G1511' => 'twi', 'unitig_0.g915' => 'ugi', 'unitig_0.g916' => 'ugi', 'unitig_21.g20219' => 'ugi', 'unitig_21.g20416' => 'ugi', 'unitig_578.g16132' => 'ugi', 'unitig_578.g16718' => 'ugi', 'unitig_62.g23481' => 'ugi', 'unitig_744.g24535' => 'ugi', 'unitig_749.g13525' => 'ugi', 'vmacro01248' => 'vma', 'vmacro02290' => 'vma', 'vmacro10946' => 'vma', 'vmacro11865' => 'vma', 'vmacro12493' => 'vma', 'vmacro17322' => 'vma', 'vmacro21599' => 'vma', 'vmacro23041' => 'vma', 'VMungo0251G0004' => 'vmu', 'VMungo0251G2639' => 'vmu', 'VMungo0251G2967' => 'vmu', 'VMungo0540G0864' => 'vmu', 'VMungo0540G1569' => 'vmu', 'VMungo0647G0317' => 'vmu', 'VMungo0720G1373' => 'vmu', 'VMungo0720G1508' => 'vmu', 'VMungo1080G0485' => 'vmu', 'VMungo1215G3177' => 'vmu', 'Zm00001eb112600' => 'zma', 'Zm00001eb120220' => 'zma', 'Zm00001eb153240' => 'zma', 'Zm00001eb168880' => 'zma', 'Zm00001eb213920' => 'zma', 'Zm00001eb228280' => 'zma', 'Zm00001eb254580' => 'zma', 'Zm00001eb272180' => 'zma', 'Zm00001eb293190' => 'zma', 'Zm00001eb322930' => 'zma', 'Zm00001eb353360' => 'zma', 'Zm00001eb353390' => 'zma', 'Zm00001eb353430' => 'zma', 'Zm00001eb353440' => 'zma', 'Zm00001eb353780' => 'zma' ) $gf_id = 'HOM05D000499' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000499' ) $data_identifier = 'HOM05D000499' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 29, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 12, 'amhyb' => (int) 8, 'aly' => (int) 12, 'aox' => (int) 9, 'arhy' => (int) 26, 'ath' => (int) 8, 'atr' => (int) 7, 'acertr' => (int) 10, 'cqu' => (int) 15, 'bca' => (int) 29, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 11, 'cansat' => (int) 8, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 9, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 8, 'cpa' => (int) 10, 'csa' => (int) 7, 'camsi' => (int) 20, 'dca' => (int) 8, 'din' => (int) 12, 'dzi' => (int) 14, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 6, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 38, 'gra' => (int) 16, 'vvi' => (int) 8, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 5, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 11, 'lja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 11, 'mpo' => (int) 3, 'mbi' => (int) 14, 'mdo' => (int) 14, 'mtr' => (int) 8, 'cme' => (int) 9, 'egut' => (int) 9, 'ama' => (int) 11, 'nta' => (int) 17, 'nnu' => (int) 11, 'oeu' => (int) 18, 'osa' => (int) 8, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 6, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 9, 'rsi' => (int) 9, 'sbr' => (int) 10, 'sbo' => (int) 8, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 10, 'sas' => (int) 10, 'shi' => (int) 6, 'smo' => (int) 7, 'sly' => (int) 14, 'spe' => (int) 10, 'spa' => (int) 8, 'tar' => (int) 19, 'tha' => (int) 10, 'tca' => (int) 8, 'esa' => (int) 8, 'tpr' => (int) 11, 'twi' => (int) 13, 'ugi' => (int) 9, 'vma' => (int) 8, 'vmu' => (int) 10, 'zma' => (int) 15 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb353780' $species_info = array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ) $local_species = 'sgi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000499', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1066', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p29780' => 'bna', 'A02p33180' => 'bna', 'A03p16470' => 'bna', 'A03p66010' => 'bna', 'A04p25970' => 'bna', 'A06p01270' => 'bna', 'A06p46080' => 'bna', 'A07p11400' => 'bna', 'A08p01840' => 'bna', 'A08p08230' => 'bna', 'A08p25740' => 'bna', 'A09p32070' => 'bna', 'A09p37830' => 'bna', 'A09p42840' => 'bna', 'A09p42850' => 'bna', 'Aa31LG10G2060' => 'aar', 'Aa31LG2G7410' => 'aar', 'Aa31LG6G10200' => 'aar', 'Aa31LG6G16680' => 'aar', 'Aa31LG6G8470' => 'aar', 'Aa31LG9G12730' => 'aar', 'Aa31LG9G13680' => 'aar', 'Aa31LG9G14920' => 'aar', 'Aa31LG9G6650' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4977' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5467' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3254' => 'aag', 'Actinidia02578' => 'ach', 'Actinidia07693' => 'ach', 'Actinidia08413' => 'ach', 'Actinidia08414' => 'ach', 'Actinidia15289' => 'ach', 'Actinidia19871' => 'ach', 'Actinidia21475' => 'ach', 'Actinidia22576' => 'ach', 'Actinidia28327' => 'ach', 'Actinidia32491' => 'ach', 'Actinidia39463' => 'ach', 'Actinidia39571' => 'ach', 'Ah.01g013750' => 'amhyb', 'Ah.01g023210' => 'amhyb', 'Ah.04g164850' => 'amhyb', 'Ah.05g178060' => 'amhyb', 'Ah.07g204270' => 'amhyb', 'Ah.07g208480' => 'amhyb', 'Ah.09g237410' => 'amhyb', 'Ah.14g089460' => 'amhyb', 'AL1G41790' => 'aly', 'AL1G49050' => 'aly', 'AL1G53810' => 'aly', 'AL1G61400' => 'aly', 'AL4G18580' => 'aly', 'AL5G12510' => 'aly', 'AL5G12540' => 'aly', 'AL6G43230' => 'aly', 'AL7G10370' => 'aly', 'AL7G19250' => 'aly', 'AL8G12240' => 'aly', 'AL8G18540' => 'aly', 'Aqoxy1G02409' => 'aox', 'Aqoxy2G03993' => 'aox', 'Aqoxy3G03357' => 'aox', 'Aqoxy4G00785' => 'aox', 'Aqoxy5G02598' => 'aox', 'Aqoxy6G00132' => 'aox', 'Aqoxy7G01776' => 'aox', 'Aqoxy7G02316' => 'aox', 'Aqoxy7G03973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.12AFKW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B8730' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27IQR1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3F75VG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3RE0GA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41TCQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.527VTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FIR39' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5W8UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DA38EV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ63HS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H1I32C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HC27T5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4M8AP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7N3CZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9UVDZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LS1NQA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT1D4B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SKC4TM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCFV76' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF9Q1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQWD9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1ZM88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WE07RT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YCK7VH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJE6Q6' => 'arhy', 'AT1G28240' => 'ath', 'AT1G34550' => 'ath', 'AT1G53040' => 'ath', 'AT2G02910' => 'ath', 'AT4G09630' => 'ath', 'AT4G38500' => 'ath', 'AT5G42660' => 'ath', 'AT5G46220' => 'ath', 'ATR0152G026' => 'atr', 'ATR0564G343' => 'atr', 'ATR0706G151' => 'atr', 'ATR0733G207' => 'atr', 'ATR0751G234' => 'atr', 'ATR0807G048' => 'atr', 'ATR1091G084' => 'atr', 'Atru.chr10.1229' => 'acertr', 'Atru.chr10.1230' => 'acertr', 'Atru.chr10.1874' => 'acertr', 'Atru.chr11.1808' => 'acertr', 'Atru.chr13.1795' => 'acertr', 'Atru.chr13.570' => 'acertr', 'Atru.chr2.2608' => 'acertr', 'Atru.chr2.2609' => 'acertr', 'Atru.chr5.3428' => 'acertr', 'Atru.chr8.1171' => 'acertr', 'AUR62004651' => 'cqu', 'AUR62008675' => 'cqu', 'AUR62010014' => 'cqu', 'AUR62013004' => 'cqu', 'AUR62014825' => 'cqu', 'AUR62015015' => 'cqu', 'AUR62015151' => 'cqu', 'AUR62017020' => 'cqu', 'AUR62019422' => 'cqu', 'AUR62023570' => 'cqu', 'AUR62025571' => 'cqu', 'AUR62029098' => 'cqu', 'AUR62033863' => 'cqu', 'AUR62034296' => 'cqu', 'AUR62040075' => 'cqu', 'BcaB02g07334' => 'bca', 'BcaB02g10575' => 'bca', 'BcaB03g12119' => 'bca', 'BcaB03g12120' => 'bca', 'BcaB03g13945' => 'bca', 'BcaB04g17123' => 'bca', 'BcaB04g17867' => 'bca', 'BcaB04g19839' => 'bca', 'BcaB07g30317' => 'bca', 'BcaB07g32432' => 'bca', 'BcaB07g33362' => 'bca', 'BcaB08g36611' => 'bca', 'BcaC01g00028' => 'bca', 'BcaC01g01356' => 'bca', 'BcaC01g02034' => 'bca', 'BcaC01g06051' => 'bca', 'BcaC03g16839' => 'bca', 'BcaC03g17176' => 'bca', 'BcaC05g26829' => 'bca', 'BcaC06g31490' => 'bca', 'BcaC06g35344' => 'bca', 'BcaC06g36570' => 'bca', 'BcaC07g37537' => 'bca', 'BcaC08g43491' => 'bca', 'BcaC08g43773' => 'bca', 'BcaNung00234' => 'bca', 'BcaNung01982' => 'bca', 'BcaNung03707' => 'bca', 'BcaNung06454' => 'bca', 'BolC2t10762H' => 'bol', 'BolC2t11191H' => 'bol', 'BolC3t14322H' => 'bol', 'BolC3t19747H' => 'bol', 'BolC3t21425H' => 'bol', 'BolC4t27800H' => 'bol', 'BolC5t31423H' => 'bol', 'BolC6t35951H' => 'bol', 'BolC6t36282H' => 'bol', 'BolC7t40678H' => 'bol', 'BolC7t40679H' => 'bol', 'BolC7t42222H' => 'bol', 'BolC7t43492H' => 'bol', 'BolC7t46785H' => 'bol', 'BolC8t47853H' => 'bol', 'BolC9t56805H' => 'bol', 'BraA02t08000Z' => 'bra', 'BraA02t08341Z' => 'bra', 'BraA03t10936Z' => 'bra', 'BraA03t15657Z' => 'bra', 'BraA04t18100Z' => 'bra', 'BraA05t20523Z' => 'bra', 'BraA06t23353Z' => 'bra', 'BraA06t27473Z' => 'bra', 'BraA06t27769Z' => 'bra', 'BraA07t28928Z' => 'bra', 'BraA08t32236Z' => 'bra', 'BraA08t32841Z' => 'bra', 'BraA08t34524Z' => 'bra', 'BraA09t38742Z' => 'bra', 'BraA09t39295Z' => 'bra', 'C02p47180' => 'bna', 'C02p50990' => 'bna', 'C03p19360' => 'bna', 'C03p74950' => 'bna', 'C03p91000' => 'bna', 'C04p63260' => 'bna', 'C05p27050' => 'bna', 'C06p08750' => 'bna', 'C06p11490' => 'bna', 'C07p02820' => 'bna', 'C07p17180' => 'bna', 'C07p29440' => 'bna', 'C07p63730' => 'bna', 'C09p39260' => 'bna', 'CAN.G1164.34' => 'can', 'CAN.G1164.39' => 'can', 'CAN.G1530.3' => 'can', 'CAN.G162.61' => 'can', 'CAN.G176.6' => 'can', 'CAN.G289.49' => 'can', 'CAN.G370.21' => 'can', 'CAN.G370.22' => 'can', 'CAN.G371.117' => 'can', 'CAN.G58.37' => 'can', 'CAN.G588.98' => 'can', 'CANSAT21G2266' => 'cansat', 'CANSAT25G2799' => 'cansat', 'CANSAT35G0862' => 'cansat', 'CANSAT35G1704' => 'cansat', 'CANSAT35G1760' => 'cansat', 'CANSAT56G3971' => 'cansat', 'CANSAT56G4116' => 'cansat', 'CANSAT80G1259' => 'cansat', 'CARHR027730' => 'chi', 'CARHR033880' => 'chi', 'CARHR043270' => 'chi', 'CARHR145330' => 'chi', 'CARHR145340' => 'chi', 'CARHR175570' => 'chi', 'CARHR181570' => 'chi', 'CARHR258470' => 'chi', 'CARHR260490' => 'chi', 'CARHR294220' => 'chi', 'Carub.0001s2668' => 'cru', 'Carub.0001s3257' => 'cru', 'Carub.0001s4220' => 'cru', 'Carub.0005s0179' => 'cru', 'Carub.0006s2807' => 'cru', 'Carub.0007s0039' => 'cru', 'Carub.0008s0169' => 'cru', 'Carub.0008s0636' => 'cru', 'Ca_00338_v3' => 'car', 'Ca_00542_v3' => 'car', 'Ca_01844_v3' => 'car', 'Ca_10611_v3' => 'car', 'Ca_13326_v3' => 'car', 'Ca_17944_v3' => 'car', 'Ca_18546_v3' => 'car', 'Ca_24219_v3' => 'car', 'Ca_29972_v3' => 'car', 'CBR_g3681' => 'cbr', 'CBR_g40021' => 'cbr', 'Cc01_g08140' => 'ccan', 'Cc02_g13410' => 'ccan', 'Cc02_g37480' => 'ccan', 'Cc05_g12030' => 'ccan', 'Cc09_g03370' => 'ccan', 'Cc09_g10300' => 'ccan', 'Cc10_g03530' => 'ccan', 'Cc10_g11380' => 'ccan', 'CDE01G0176' => 'cde', 'CDE02G0675' => 'cde', 'CDE02G0942' => 'cde', 'CDE02G1153' => 'cde', 'CDE02G4177' => 'cde', 'CDE04G2117' => 'cde', 'CDE04G2736' => 'cde', 'CDE08G1161' => 'cde', 'CDE09G1238' => 'cde', 'Cfa000467' => 'cfa', 'Cfa000947' => 'cfa', 'Cfa004969' => 'cfa', 'Cfa005284' => 'cfa', 'Cfa008993' => 'cfa', 'Cfa018187' => 'cfa', 'Cfa018454' => 'cfa', 'Cfa020585' => 'cfa', 'Ciclev10000424m.g' => 'ccl', 'Ciclev10003605m.g' => 'ccl', 'Ciclev10007828m.g' => 'ccl', 'Ciclev10014620m.g' => 'ccl', 'Ciclev10015169m.g' => 'ccl', 'Ciclev10018291m.g' => 'ccl', 'Ciclev10028256m.g' => 'ccl', 'Ciclev10033822m.g' => 'ccl', 'CiPaw.05G060300' => 'cil', 'CiPaw.05G085000' => 'cil', 'CiPaw.06G083700' => 'cil', 'CiPaw.06G120300' => 'cil', 'CiPaw.09G060500' => 'cil', 'CiPaw.09G123800' => 'cil', 'CiPaw.11G169700' => 'cil', 'CiPaw.12G118300' => 'cil', 'CiPaw.15G071000' => 'cil', 'CiPaw.15G081900' => 'cil', 'ClCG01G024610' => 'cla', 'ClCG03G006070' => 'cla', 'ClCG05G019250' => 'cla', 'ClCG09G009500' => 'cla', 'ClCG11G008200' => 'cla', 'ClCG11G018080' => 'cla', 'COL.COLO4_17373' => 'col', 'COL.COLO4_22994' => 'col', 'COL.COLO4_26389' => 'col', 'COL.COLO4_27170' => 'col', 'COL.COLO4_31074' => 'col', 'COL.COLO4_31465' => 'col', 'COL.COLO4_36438' => 'col', 'COL.COLO4_36439' => 'col', 'Cpa.g.c38781' => 'cpa', 'Cpa.g.sc128.12' => 'cpa', 'Cpa.g.sc166.7' => 'cpa', 'Cpa.g.sc166.8' => 'cpa', 'Cpa.g.sc20.111' => 'cpa', 'Cpa.g.sc27.31' => 'cpa', 'Cpa.g.sc64.36' => 'cpa', 'Cpa.g.sc64.37' => 'cpa', 'Cpa.g.sc66.49' => 'cpa', 'Cpa.g.sc80.64' => 'cpa', 'CsaV3_1G012320' => 'csa', 'CsaV3_2G008480' => 'csa', 'CsaV3_2G033450' => 'csa', 'CsaV3_3G044830' => 'csa', 'CsaV3_4G033710' => 'csa', 'CsaV3_6G051730' => 'csa', 'CsaV3_7G025350' => 'csa', 'CSS0001067' => 'camsi', 'CSS0005996' => 'camsi', 'CSS0006590' => 'camsi', 'CSS0009673' => 'camsi', 'CSS0010201' => 'camsi', 'CSS0010549' => 'camsi', 'CSS0011364' => 'camsi', 'CSS0014473' => 'camsi', 'CSS0014961' => 'camsi', 'CSS0020191' => 'camsi', 'CSS0021165' => 'camsi', 'CSS0022306' => 'camsi', 'CSS0030591' => 'camsi', 'CSS0030696' => 'camsi', 'CSS0032653' => 'camsi', 'CSS0037487' => 'camsi', 'CSS0041102' => 'camsi', 'CSS0041261' => 'camsi', 'CSS0046246' => 'camsi', 'CSS0049256' => 'camsi', 'DCAR_004075' => 'dca', 'DCAR_011538' => 'dca', 'DCAR_019553' => 'dca', 'DCAR_020952' => 'dca', 'DCAR_021739' => 'dca', 'DCAR_027407' => 'dca', 'DCAR_027913' => 'dca', 'DCAR_028066' => 'dca', 'Dinv05899' => 'din', 'Dinv07563' => 'din', 'Dinv08010' => 'din', 'Dinv14125' => 'din', 'Dinv20172' => 'din', 'Dinv30743' => 'din', 'Dinv31229' => 'din', 'Dinv34162' => 'din', 'Dinv36028' => 'din', 'Dinv39368' => 'din', 'Dinv40565' => 'din', 'Dinv41706' => 'din', 'Duzib052G0089' => 'dzi', 'Duzib116G0641' => 'dzi', 'Duzib132G0069' => 'dzi', 'Duzib132G1219' => 'dzi', 'Duzib147G0278' => 'dzi', 'Duzib160G0480' => 'dzi', 'Duzib170G0661' => 'dzi', 'Duzib177G0591' => 'dzi', 'Duzib187G1353' => 'dzi', 'Duzib192G0858' => 'dzi', 'Duzib192G0883' => 'dzi', 'Duzib213G0506' => 'dzi', 'Duzib235G0289' => 'dzi', 'Duzib251G0422' => 'dzi', 'ECA232G3898' => 'eca', 'ECA233G5950' => 'eca', 'ECA234G1699' => 'eca', 'ECA234G2421' => 'eca', 'ECA236G0426' => 'eca', 'ECA236G4331' => 'eca', 'ECA248G2573' => 'eca', 'EL10Ac1g00077' => 'bvu', 'EL10Ac1g01746' => 'bvu', 'EL10Ac2g03464' => 'bvu', 'EL10Ac4g08176' => 'bvu', 'EL10Ac7g17521' => 'bvu', 'EL10Ac8g20386' => 'bvu', 'EL10Ac9g21343' => 'bvu', 'EL10Ac9g22688' => 'bvu', 'Eucgr.B03434' => 'egr', 'Eucgr.D00618' => 'egr', 'Eucgr.E02395' => 'egr', 'Eucgr.F01129' => 'egr', 'Eucgr.F02622' => 'egr', 'Eucgr.F04207' => 'egr', 'FAN01G0570' => 'fan', 'FAN03G3351' => 'fan', 'FAN06G3702' => 'fan', 'FAN07G2149' => 'fan', 'FAN10G3758' => 'fan', 'FAN11G1170' => 'fan', 'FAN11G2050' => 'fan', 'FAN11G2724' => 'fan', 'FAN12G1700' => 'fan', 'FAN12G2028' => 'fan', 'FAN15G1160' => 'fan', 'FAN15G3063' => 'fan', 'FAN16G2540' => 'fan', 'FAN16G3077' => 'fan', 'FAN16G3624' => 'fan', 'FAN17G0221' => 'fan', 'FAN20G2492' => 'fan', 'FAN20G2905' => 'fan', 'FAN21G0548' => 'fan', 'FAN21G1300' => 'fan', 'FAN22G0077' => 'fan', 'FAN22G1315' => 'fan', 'FAN24G1280' => 'fan', 'FAN24G1445' => 'fan', 'FAN24G3527' => 'fan', 'FAN25G0464' => 'fan', 'FAN25G2885' => 'fan', 'FAN25G3270' => 'fan', 'FAN27G1101' => 'fan', 'FAN27G2846' => 'fan', 'FAN27G3524' => 'fan', 'FvH4_2g11770' => 'fve', 'FvH4_2g15630' => 'fve', 'FvH4_3g05570' => 'fve', 'FvH4_3g09110' => 'fve', 'FvH4_3g19940' => 'fve', 'FvH4_4g04821' => 'fve', 'FvH4_4g31480' => 'fve', 'FvH4_7g01740' => 'fve', 'Glyma.05G130400' => 'gma', 'Glyma.05G156400' => 'gma', 'Glyma.07G197000' => 'gma', 'Glyma.08G085151' => 'gma', 'Glyma.08G114500' => 'gma', 'Glyma.08G300400' => 'gma', 'Glyma.10G215800' => 'gma', 'Glyma.12G224400' => 'gma', 'Glyma.13G179300' => 'gma', 'Glyma.13G218151' => 'gma', 'Glyma.13G238800' => 'gma', 'Glyma.13G276900' => 'gma', 'Glyma.14G078200' => 'gma', 'Glyma.15G074500' => 'gma', 'Glyma.15G094100' => 'gma', 'Glyma.17G247200' => 'gma', 'Glyma.18G120100' => 'gma', 'Glyma.20G176000' => 'gma', 'Gohir.A01G063600' => 'ghi', 'Gohir.A01G170301' => 'ghi', 'Gohir.A02G060500' => 'ghi', 'Gohir.A05G133850' => 'ghi', 'Gohir.A05G161400' => 'ghi', 'Gohir.A06G012900' => 'ghi', 'Gohir.A06G035901' => 'ghi', 'Gohir.A06G127100' => 'ghi', 'Gohir.A06G210500' => 'ghi', 'Gohir.A08G008650' => 'ghi', 'Gohir.A09G072700' => 'ghi', 'Gohir.A09G088301' => 'ghi', 'Gohir.A10G040600' => 'ghi', 'Gohir.A12G036300' => 'ghi', 'Gohir.A12G143350' => 'ghi', 'Gohir.A12G165500' => 'ghi', 'Gohir.A13G145700' => 'ghi', 'Gohir.D01G050000' => 'ghi', 'Gohir.D01G051366' => 'ghi', 'Gohir.D01G161350' => 'ghi', 'Gohir.D02G065900' => 'ghi', 'Gohir.D05G164200' => 'ghi', 'Gohir.D05G355500' => 'ghi', 'Gohir.D06G010400' => 'ghi', 'Gohir.D06G111250' => 'ghi', 'Gohir.D06G132000' => 'ghi', 'Gohir.D06G210500' => 'ghi', 'Gohir.D07G165675' => 'ghi', 'Gohir.D08G062240' => 'ghi', 'Gohir.D08G086101' => 'ghi', 'Gohir.D08G138060' => 'ghi', 'Gohir.D09G072300' => 'ghi', 'Gohir.D10G041400' => 'ghi', 'Gohir.D11G191020' => 'ghi', 'Gohir.D11G212066' => 'ghi', 'Gohir.D12G036300' => 'ghi', 'Gohir.D12G168600' => 'ghi', 'Gohir.D13G150600' => 'ghi', 'Gorai.001G057300' => 'gra', 'Gorai.002G069900' => 'gra', 'Gorai.002G200000' => 'gra', 'Gorai.003G067600' => 'gra', 'Gorai.005G074800' => 'gra', 'Gorai.006G087300' => 'gra', 'Gorai.008G037500' => 'gra', 'Gorai.008G181400' => 'gra', 'Gorai.009G169400' => 'gra', 'Gorai.009G387900' => 'gra', 'Gorai.010G013300' => 'gra', 'Gorai.010G153800' => 'gra', 'Gorai.010G255800' => 'gra', 'Gorai.011G043700' => 'gra', 'Gorai.011G198900' => 'gra', 'Gorai.013G168400' => 'gra', 'GSVIVG01005212001' => 'vvi', 'GSVIVG01006163001' => 'vvi', 'GSVIVG01009625001' => 'vvi', 'GSVIVG01014338001' => 'vvi', 'GSVIVG01020005001' => 'vvi', 'GSVIVG01021450001' => 'vvi', 'GSVIVG01023975001' => 'vvi', 'GSVIVG01034490001' => 'vvi', 'HanXRQChr04g0112071' => 'han', 'HanXRQChr05g0131151' => 'han', 'HanXRQChr09g0262371' => 'han', 'HanXRQChr09g0268401' => 'han', 'HanXRQChr10g0279241' => 'han', 'HanXRQChr10g0297961' => 'han', 'HanXRQChr11g0326231' => 'han', 'HanXRQChr11g0328471' => 'han', 'HanXRQChr16g0507941' => 'han', 'HanXRQChr17g0560211' => 'han', 'Haze_02108' => 'cav', 'Haze_02428' => 'cav', 'Haze_05593' => 'cav', 'Haze_06448' => 'cav', 'Haze_09427' => 'cav', 'Haze_12022' => 'cav', 'Haze_17612' => 'cav', 'Haze_17928' => 'cav', 'Hma1.2p1_0032F.1_g019250' => 'hma', 'Hma1.2p1_0163F.1_g072690' => 'hma', 'Hma1.2p1_0265F.1_g106710' => 'hma', 'Hma1.2p1_0286F.1_g113970' => 'hma', 'Hma1.2p1_0363F.1_g136640' => 'hma', 'Hma1.2p1_0584F.1_g183470' => 'hma', 'Hma1.2p1_0885F.1_g232570' => 'hma', 'HPP92_006022' => 'vpl', 'HPP92_007320' => 'vpl', 'HPP92_011521' => 'vpl', 'HPP92_019387' => 'vpl', 'HPP92_024038' => 'vpl', 'Hund05891' => 'sun', 'Hund06450' => 'sun', 'Hund12053' => 'sun', 'Hund16800' => 'sun', 'Hund21222' => 'sun', 'Hund22896' => 'sun', 'Hund23746' => 'sun', 'Hund27083' => 'sun', 'Lalb_Chr02g0141831' => 'lal', 'Lalb_Chr02g0141841' => 'lal', 'Lalb_Chr05g0220411' => 'lal', 'Lalb_Chr06g0162081' => 'lal', 'Lalb_Chr09g0327651' => 'lal', 'Lalb_Chr13g0295051' => 'lal', 'Lalb_Chr15g0086801' => 'lal', 'Lalb_Chr16g0383781' => 'lal', 'Lalb_Chr16g0383791' => 'lal', 'Lalb_Chr18g0055441' => 'lal', 'Lalb_Chr18g0059611' => 'lal', 'Lalb_Chr20g0109661' => 'lal', 'Lalb_Chr20g0109831' => 'lal', 'Lalb_Chr20g0121871' => 'lal', 'Lalb_Chr22g0355361' => 'lal', 'Lalb_Chr25g0286371' => 'lal', 'Lj1A1187G43' => 'lonja', 'Lj1A1205T50' => 'lonja', 'Lj1A800G33' => 'lonja', 'Lj1C1187T7' => 'lonja', 'Lj1C843T11' => 'lonja', 'Lj1g0010940' => 'lja', 'Lj2A288T69' => 'lonja', 'Lj3g0024276' => 'lja', 'Lj4A47T76' => 'lonja', 'Lj4g0005805' => 'lja', 'Lj4g0006097' => 'lja', 'Lj4g0008528' => 'lja', 'Lj4g0024907' => 'lja', 'Lj5g0012472' => 'lja', 'Lj5g0018648' => 'lja', 'Lj6C789G1' => 'lonja', 'Lj6g0004000' => 'lja', 'Lj7A292G67' => 'lonja', 'Lj7A292T64' => 'lonja', 'Lj9A400T58' => 'lonja', 'Lsat_1_v5_gn_1_126181' => 'lsa', 'Lsat_1_v5_gn_4_123041' => 'lsa', 'Lsat_1_v5_gn_4_133620' => 'lsa', 'Lsat_1_v5_gn_4_53221' => 'lsa', 'Lsat_1_v5_gn_4_71961' => 'lsa', 'Lsat_1_v5_gn_7_105241' => 'lsa', 'Lsat_1_v5_gn_7_21361' => 'lsa', 'Lsat_1_v5_gn_7_28860' => 'lsa', 'Lsat_1_v5_gn_7_31260' => 'lsa', 'Lsat_1_v5_gn_8_52801' => 'lsa', 'Manes.02G191400' => 'mes', 'Manes.03G110100' => 'mes', 'Manes.04G071100' => 'mes', 'Manes.05G100500' => 'mes', 'Manes.05G164700' => 'mes', 'Manes.15G087000' => 'mes', 'Manes.15G121500' => 'mes', 'Manes.16G028300' => 'mes', 'Manes.17G046100' => 'mes', 'Manes.17G069800' => 'mes', 'Manes.18G100500' => 'mes', 'Mapoly0002s0109' => 'mpo', 'Mapoly0024s0007' => 'mpo', 'Mapoly0089s0032' => 'mpo', 'MBI04_g42241_MAGBIO' => 'mbi', 'MBI05_g11988_MAGBIO' => 'mbi', 'MBI05_g35452_MAGBIO' => 'mbi', 'MBI07_g30179_MAGBIO' => 'mbi', 'MBI07_g35859_MAGBIO' => 'mbi', 'MBI07_g35860_MAGBIO' => 'mbi', 'MBI07_g37166_MAGBIO' => 'mbi', 'MBI08_g18172_MAGBIO' => 'mbi', 'MBI09_g08441_MAGBIO' => 'mbi', 'MBI13_g01676_MAGBIO' => 'mbi', 'MBI14_g42955_MAGBIO' => 'mbi', 'MBI16_g13161_MAGBIO' => 'mbi', 'MBI17_g27204_MAGBIO' => 'mbi', 'MBI19_g21595_MAGBIO' => 'mbi', 'MD00G1148400' => 'mdo', 'MD02G1301200' => 'mdo', 'MD03G1227800' => 'mdo', 'MD05G1041100' => 'mdo', 'MD05G1124800' => 'mdo', 'MD05G1284000' => 'mdo', 'MD05G1338800' => 'mdo', 'MD05G1338900' => 'mdo', 'MD07G1022800' => 'mdo', 'MD10G1047500' => 'mdo', 'MD10G1127500' => 'mdo', 'MD10G1262300' => 'mdo', 'MD10G1293800' => 'mdo', 'MD16G1074300' => 'mdo', 'Medtr1g021670' => 'mtr', 'Medtr1g096320' => 'mtr', 'Medtr2g013690' => 'mtr', 'Medtr2g019450' => 'mtr', 'Medtr2g085170' => 'mtr', 'Medtr4g088785' => 'mtr', 'Medtr8g055930' => 'mtr', 'Medtr8g085850' => 'mtr', 'MELO3C002605.2' => 'cme', 'MELO3C003891.2' => 'cme', 'MELO3C004012.2' => 'cme', 'MELO3C007134.2' => 'cme', 'MELO3C008118.2' => 'cme', 'MELO3C016700.2' => 'cme', 'MELO3C024127.2' => 'cme', 'MELO3C033361.2' => 'cme', 'MELO3C033362.2' => 'cme', 'Migut.C00430' => 'egut', 'Migut.C01246' => 'egut', 'Migut.E00101' => 'egut', 'Migut.H01486' => 'egut', 'Migut.H01939' => 'egut', 'Migut.K00360' => 'egut', 'Migut.M00910' => 'egut', 'Migut.M01139' => 'egut', 'Migut.N02677' => 'egut', 'MSTRG.13252' => 'ama', 'MSTRG.14701' => 'ama', 'MSTRG.1521' => 'ama', 'MSTRG.15884' => 'ama', 'MSTRG.16242' => 'ama', 'MSTRG.22285' => 'ama', 'MSTRG.22444' => 'ama', 'MSTRG.2349' => 'ama', 'MSTRG.26308' => 'ama', 'MSTRG.28296' => 'ama', 'MSTRG.9895' => 'ama', 'Nitab4.5_0000110g0060' => 'nta', 'Nitab4.5_0000420g0130' => 'nta', 'Nitab4.5_0000422g0030' => 'nta', 'Nitab4.5_0000560g0180' => 'nta', 'Nitab4.5_0000703g0100' => 'nta', 'Nitab4.5_0000786g0200' => 'nta', 'Nitab4.5_0001336g0020' => 'nta', 'Nitab4.5_0001796g0030' => 'nta', 'Nitab4.5_0003348g0060' => 'nta', 'Nitab4.5_0003698g0040' => 'nta', 'Nitab4.5_0003942g0090' => 'nta', 'Nitab4.5_0004775g0070' => 'nta', 'Nitab4.5_0004864g0030' => 'nta', 'Nitab4.5_0005615g0020' => 'nta', 'Nitab4.5_0009288g0030' => 'nta', 'Nitab4.5_0009341g0010' => 'nta', 'Nitab4.5_0009535g0010' => 'nta', 'Nn1g03995' => 'nnu', 'Nn1g04100' => 'nnu', 'Nn1g06530' => 'nnu', 'Nn3g16404' => 'nnu', 'Nn3g17212' => 'nnu', 'Nn3g20776' => 'nnu', 'Nn3g21923' => 'nnu', 'Nn5g27737' => 'nnu', 'Nn5g29461' => 'nnu', 'Nn7g38355' => 'nnu', 'Nn8g39873' => 'nnu', 'Oeu000548.2' => 'oeu', 'Oeu004672.1' => 'oeu', 'Oeu015605.2' => 'oeu', 'Oeu016092.1' => 'oeu', 'Oeu017879.3' => 'oeu', 'Oeu024910.1' => 'oeu', 'Oeu028965.1' => 'oeu', 'Oeu031269.1' => 'oeu', 'Oeu031270.1' => 'oeu', 'Oeu032535.1' => 'oeu', 'Oeu034151.1' => 'oeu', 'Oeu034152.1' => 'oeu', 'Oeu034588.2' => 'oeu', 'Oeu050846.1' => 'oeu', 'Oeu050849.2' => 'oeu', 'Oeu051063.2' => 'oeu', 'Oeu052368.1' => 'oeu', 'Oeu052370.1' => 'oeu', 'Os01g0210400' => 'osa', 'Os01g0304300' => 'osa', 'Os01g0749100' => 'osa', 'Os02g0745800' => 'osa', 'Os03g0769050' => 'osa', 'Os05g0531500' => 'osa', 'Os06g0724300' => 'osa', 'Os11g0198100' => 'osa', 'Peaxi162Scf00069g01425' => 'pax', 'Peaxi162Scf00280g00811' => 'pax', 'Peaxi162Scf00310g00615' => 'pax', 'Peaxi162Scf00362g00542' => 'pax', 'Peaxi162Scf00461g00310' => 'pax', 'Peaxi162Scf00530g00118' => 'pax', 'Peaxi162Scf00541g00057' => 'pax', 'Peaxi162Scf00661g00017' => 'pax', 'Peaxi162Scf00926g00027' => 'pax', 'Peaxi162Scf01064g00263' => 'pax', 'Peaxi162Scf01211g00135' => 'pax', 'PGR004G2336' => 'pgr', 'PGR042G0327' => 'pgr', 'PGR042G1957' => 'pgr', 'PGR042G2003' => 'pgr', 'PGR042G3929' => 'pgr', 'PGR083G1137' => 'pgr', 'PGR083G1364' => 'pgr', 'PGSC0003DMG400003381' => 'stu', 'PGSC0003DMG400003417' => 'stu', 'PGSC0003DMG400008981' => 'stu', 'PGSC0003DMG400012417' => 'stu', 'PGSC0003DMG400012823' => 'stu', 'PGSC0003DMG400016885' => 'stu', 'PGSC0003DMG400022812' => 'stu', 'PGSC0003DMG400029726' => 'stu', 'PGSC0003DMG401009243' => 'stu', 'PGSC0003DMG401031505' => 'stu', 'PGSC0003DMG402031505' => 'stu', 'Phvul.001G017600' => 'pvu', 'Phvul.002G193500' => 'pvu', 'Phvul.002G228900' => 'pvu', 'Phvul.002G236800' => 'pvu', 'Phvul.003G049500' => 'pvu', 'Phvul.005G072000' => 'pvu', 'Phvul.006G164800' => 'pvu', 'Phvul.006G185100' => 'pvu', 'Phvul.007G090000' => 'pvu', 'Potri.001G399800' => 'ptr', 'Potri.002G149900' => 'ptr', 'Potri.004G044100' => 'ptr', 'Potri.004G177600' => 'ptr', 'Potri.009G138000' => 'ptr', 'Potri.010G094000' => 'ptr', 'Potri.011G053000' => 'ptr', 'Potri.011G119300' => 'ptr', 'Potri.013G113700' => 'ptr', 'Potri.018G107800' => 'ptr', 'Potri.019G084100' => 'ptr', 'Pp3c14_23720' => 'ppa', 'Pp3c16_6340' => 'ppa', 'Pp3c23_13420' => 'ppa', 'Pp3c24_2740' => 'ppa', 'Pp3c25_860' => 'ppa', 'Pp3c8_21750' => 'ppa', 'Prupe.1G273000' => 'ppe', 'Prupe.1G273700' => 'ppe', 'Prupe.1G274100' => 'ppe', 'Prupe.2G023300' => 'ppe', 'Prupe.4G048000' => 'ppe', 'Prupe.4G080400' => 'ppe', 'Prupe.4G181200' => 'ppe', 'Prupe.8G056900' => 'ppe', 'Prupe.8G168700' => 'ppe', 'Psat1g189080' => 'psa', 'Psat1g204760' => 'psa', 'Psat4g175560' => 'psa', 'Psat4g177720' => 'psa', 'Psat5g244240' => 'psa', 'Psat6g010720' => 'psa', 'Psat6g187200' => 'psa', 'Psat7g072040' => 'psa', 'PSO017G3501' => 'pso', 'PSO063G2148' => 'pso', 'PSO063G5608' => 'pso', 'PSO210G6392' => 'pso', 'PSO541G2319' => 'pso', 'PSO541G2836' => 'pso', 'PSO541G4012' => 'pso', 'PSO541G6253' => 'pso', 'PSO675G0580' => 'pso', 'PSO675G0856' => 'pso', 'PSO675G5635' => 'pso', 'PSO675G9157' => 'pso', 'PSO832G1660' => 'pso', 'PSO832G1969' => 'pso', 'QL02p007186' => 'qlo', 'QL02p033904' => 'qlo', 'QL03p064391' => 'qlo', 'QL05p040593' => 'qlo', 'QL05p058242' => 'qlo', 'QL08p021825' => 'qlo', 'QL11p004981' => 'qlo', 'RcHm_v2.0_Chr1g0318301' => 'rch', 'RcHm_v2.0_Chr4g0418501' => 'rch', 'RcHm_v2.0_Chr4g0439971' => 'rch', 'RcHm_v2.0_Chr5g0008541' => 'rch', 'RcHm_v2.0_Chr5g0014101' => 'rch', 'RcHm_v2.0_Chr5g0014131' => 'rch', 'RcHm_v2.0_Chr5g0033621' => 'rch', 'RcHm_v2.0_Chr6g0272041' => 'rch', 'RcHm_v2.0_Chr6g0278831' => 'rch', 'Rhsim02G0130400' => 'rsi', 'Rhsim02G0171100' => 'rsi', 'Rhsim05G0053000' => 'rsi', 'Rhsim05G0053100' => 'rsi', 'Rhsim06G0096500' => 'rsi', 'Rhsim06G0096600' => 'rsi', 'Rhsim06G0199100' => 'rsi', 'Rhsim12G0062300' => 'rsi', 'Rhsim12G0062800' => 'rsi', 'Sabra02G0118600' => 'sbr', 'Sabra04G0027300' => 'sbr', 'Sabra04G0119500' => 'sbr', 'Sabra08G0112500' => 'sbr', 'Sabra11G0036800' => 'sbr', 'Sabra11G0103800' => 'sbr', 'Sabra13G0096300' => 'sbr', 'Sabra16G0262300' => 'sbr', 'Sabra18G0091700' => 'sbr', 'Sabra19G0095400' => 'sbr', 'SalBow6G3080' => 'sbo', 'SalBow7G1157' => 'sbo', 'SalBow7G2123' => 'sbo', 'SalBow7G2285' => 'sbo', 'SalBow7G3537' => 'sbo', 'SalBow8G2947' => 'sbo', 'SalBow8G4463' => 'sbo', 'SalBow8G5466' => 'sbo', 'Sc01g0001750' => 'sci', 'Sc02g0006640' => 'sci', 'Sc02g0006670' => 'sci', 'Sc04g0008220' => 'sci', 'Sc05g0006190' => 'sci', 'Sc08g0002760' => 'sci', 'Sc17g0006170' => 'sci', 'Sc22g0002050' => 'sci', 'Sc23g0001190' => 'sci', 'Sc24g0000980' => 'sci', 'Sed0006245' => 'sed', 'Sed0007543' => 'sed', 'Sed0009411' => 'sed', 'Sed0010765' => 'sed', 'Sed0012944' => 'sed', 'Sed0014682' => 'sed', 'Sed0016174' => 'sed', 'Sed0016796' => 'sed', 'Sed0020317' => 'sed', 'Sed0021467' => 'sed', 'SEGI_01316' => 'sgi', 'SEGI_03374' => 'sgi', 'SEGI_16265' => 'sgi', 'SEGI_18569' => 'sgi', 'SEGI_20351' => 'sgi', 'SEGI_26395' => 'sgi', 'SEGI_29469' => 'sgi', 'SEGI_34771' => 'sgi', 'SEGI_36769' => 'sgi', 'SEGI_37139' => 'sgi', 'SGA_v2.0_scaffold100G29687' => 'sas', 'SGA_v2.0_scaffold118G32472' => 'sas', 'SGA_v2.0_scaffold14G07051' => 'sas', 'SGA_v2.0_scaffold183G39845' => 'sas', 'SGA_v2.0_scaffold1G00174' => 'sas', 'SGA_v2.0_scaffold22G09714' => 'sas', 'SGA_v2.0_scaffold333G48992' => 'sas', 'SGA_v2.0_scaffold46G17491' => 'sas', 'SGA_v2.0_scaffold49G18294' => 'sas', 'SGA_v2.0_scaffold63G21658' => 'sas', 'SHI01741' => 'shi', 'SHI05771' => 'shi', 'SHI18077' => 'shi', 'SHI20525' => 'shi', 'SHI20527' => 'shi', 'SHI20528' => 'shi', 'SMO172G0185' => 'smo', 'SMO198G0020' => 'smo', 'SMO351G0006' => 'smo', 'SMO356G0118' => 'smo', 'SMO358G0296' => 'smo', 'SMO367G0079' => 'smo', 'SMO367G1277' => 'smo', 'Solyc01g014220.3' => 'sly', 'Solyc01g111770.2' => 'sly', 'Solyc02g078180.3' => 'sly', 'Solyc03g006430.3' => 'sly', 'Solyc03g006456.1' => 'sly', 'Solyc03g079860.2' => 'sly', 'Solyc04g079770.3' => 'sly', 'Solyc05g007430.4' => 'sly', 'Solyc07g063150.3' => 'sly', 'Solyc08g016620.3' => 'sly', 'Solyc09g057590.3' => 'sly', 'Solyc09g057600.1' => 'sly', 'Solyc10g009050.3' => 'sly', 'Solyc11g017420.2' => 'sly', 'Sopen01g053810' => 'spe', 'Sopen02g023040' => 'spe', 'Sopen03g002440' => 'spe', 'Sopen04g033350' => 'spe', 'Sopen05g003310' => 'spe', 'Sopen07g004050' => 'spe', 'Sopen07g031340' => 'spe', 'Sopen08g006990' => 'spe', 'Sopen10g004830' => 'spe', 'Sopen11g009370' => 'spe', 'Sp1g24450' => 'spa', 'Sp1g29670' => 'spa', 'Sp1g39600' => 'spa', 'Sp2g11080' => 'spa', 'Sp2g13970' => 'spa', 'Sp4g16130' => 'spa', 'Sp6g13080' => 'spa', 'Sp7g37270' => 'spa', 'TAR371G0065' => 'tar', 'TAR376G0340' => 'tar', 'TAR376G0435' => 'tar', 'TAR381G0002' => 'tar', 'TAR381G1236' => 'tar', 'TAR624G0055' => 'tar', 'TAR624G0324' => 'tar', 'TAR624G0696' => 'tar', 'TAR624G0906' => 'tar', 'TAR625G0107' => 'tar', 'TAR626G0015' => 'tar', 'TAR626G1356' => 'tar', 'TAR627G0888' => 'tar', 'TAR628G0399' => 'tar', 'TAR628G1327' => 'tar', 'TAR629G2831' => 'tar', 'TAR629G2874' => 'tar', 'TAR633G1432' => 'tar', 'TAR633G2771' => 'tar', 'THA.LOC104803394' => 'tha', 'THA.LOC104805153' => 'tha', 'THA.LOC104806784' => 'tha', 'THA.LOC104810473' => 'tha', 'THA.LOC104813100' => 'tha', 'THA.LOC104814215' => 'tha', 'THA.LOC104815554' => 'tha', 'THA.LOC104820544' => 'tha', 'THA.LOC104824754' => 'tha', 'THA.LOC104827717' => 'tha', 'Thecc.02G031400' => 'tca', 'Thecc.02G055900' => 'tca', 'Thecc.02G350800' => 'tca', 'Thecc.06G150900' => 'tca', 'Thecc.06G186600' => 'tca', 'Thecc.07G089600' => 'tca', 'Thecc.08G020400' => 'tca', 'Thecc.08G182100' => 'tca', 'Thhalv10000873m.g' => 'esa', 'Thhalv10004185m.g' => 'esa', 'Thhalv10006981m.g' => 'esa', 'Thhalv10007204m.g' => 'esa', 'Thhalv10011374m.g' => 'esa', 'Thhalv10013482m.g' => 'esa', 'Thhalv10017801m.g' => 'esa', 'Thhalv10024983m.g' => 'esa', 'TPR.G12072' => 'tpr', 'TPR.G15769' => 'tpr', 'TPR.G16504' => 'tpr', 'TPR.G16506' => 'tpr', 'TPR.G24345' => 'tpr', 'TPR.G26666' => 'tpr', 'TPR.G27320' => 'tpr', 'TPR.G31819' => 'tpr', 'TPR.G38879' => 'tpr', 'TPR.G39015' => 'tpr', 'TPR.G8819' => 'tpr', 'TWI09G0924' => 'twi', 'TWI12G0811' => 'twi', 'TWI12G1294' => 'twi', 'TWI31G0150' => 'twi', 'TWI36G1262' => 'twi', 'TWI38G1287' => 'twi', 'TWI38G1633' => 'twi', 'TWI38G1982' => 'twi', 'TWI39G0116' => 'twi', 'TWI60G1011' => 'twi', 'TWI63G0171' => 'twi', 'TWI73G0839' => 'twi', 'TWI79G1511' => 'twi', 'unitig_0.g915' => 'ugi', 'unitig_0.g916' => 'ugi', 'unitig_21.g20219' => 'ugi', 'unitig_21.g20416' => 'ugi', 'unitig_578.g16132' => 'ugi', 'unitig_578.g16718' => 'ugi', 'unitig_62.g23481' => 'ugi', 'unitig_744.g24535' => 'ugi', 'unitig_749.g13525' => 'ugi', 'vmacro01248' => 'vma', 'vmacro02290' => 'vma', 'vmacro10946' => 'vma', 'vmacro11865' => 'vma', 'vmacro12493' => 'vma', 'vmacro17322' => 'vma', 'vmacro21599' => 'vma', 'vmacro23041' => 'vma', 'VMungo0251G0004' => 'vmu', 'VMungo0251G2639' => 'vmu', 'VMungo0251G2967' => 'vmu', 'VMungo0540G0864' => 'vmu', 'VMungo0540G1569' => 'vmu', 'VMungo0647G0317' => 'vmu', 'VMungo0720G1373' => 'vmu', 'VMungo0720G1508' => 'vmu', 'VMungo1080G0485' => 'vmu', 'VMungo1215G3177' => 'vmu', 'Zm00001eb112600' => 'zma', 'Zm00001eb120220' => 'zma', 'Zm00001eb153240' => 'zma', 'Zm00001eb168880' => 'zma', 'Zm00001eb213920' => 'zma', 'Zm00001eb228280' => 'zma', 'Zm00001eb254580' => 'zma', 'Zm00001eb272180' => 'zma', 'Zm00001eb293190' => 'zma', 'Zm00001eb322930' => 'zma', 'Zm00001eb353360' => 'zma', 'Zm00001eb353390' => 'zma', 'Zm00001eb353430' => 'zma', 'Zm00001eb353440' => 'zma', 'Zm00001eb353780' => 'zma' ), 'gf_id' => 'HOM05D000499', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000499' ), 'data_identifier' => 'HOM05D000499', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000499', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1066', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p29780' => 'bna', 'A02p33180' => 'bna', 'A03p16470' => 'bna', 'A03p66010' => 'bna', 'A04p25970' => 'bna', 'A06p01270' => 'bna', 'A06p46080' => 'bna', 'A07p11400' => 'bna', 'A08p01840' => 'bna', 'A08p08230' => 'bna', 'A08p25740' => 'bna', 'A09p32070' => 'bna', 'A09p37830' => 'bna', 'A09p42840' => 'bna', 'A09p42850' => 'bna', 'Aa31LG10G2060' => 'aar', 'Aa31LG2G7410' => 'aar', 'Aa31LG6G10200' => 'aar', 'Aa31LG6G16680' => 'aar', 'Aa31LG6G8470' => 'aar', 'Aa31LG9G12730' => 'aar', 'Aa31LG9G13680' => 'aar', 'Aa31LG9G14920' => 'aar', 'Aa31LG9G6650' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4977' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5467' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3254' => 'aag', 'Actinidia02578' => 'ach', 'Actinidia07693' => 'ach', 'Actinidia08413' => 'ach', 'Actinidia08414' => 'ach', 'Actinidia15289' => 'ach', 'Actinidia19871' => 'ach', 'Actinidia21475' => 'ach', 'Actinidia22576' => 'ach', 'Actinidia28327' => 'ach', 'Actinidia32491' => 'ach', 'Actinidia39463' => 'ach', 'Actinidia39571' => 'ach', 'Ah.01g013750' => 'amhyb', 'Ah.01g023210' => 'amhyb', 'Ah.04g164850' => 'amhyb', 'Ah.05g178060' => 'amhyb', 'Ah.07g204270' => 'amhyb', 'Ah.07g208480' => 'amhyb', 'Ah.09g237410' => 'amhyb', 'Ah.14g089460' => 'amhyb', 'AL1G41790' => 'aly', 'AL1G49050' => 'aly', 'AL1G53810' => 'aly', 'AL1G61400' => 'aly', 'AL4G18580' => 'aly', 'AL5G12510' => 'aly', 'AL5G12540' => 'aly', 'AL6G43230' => 'aly', 'AL7G10370' => 'aly', 'AL7G19250' => 'aly', 'AL8G12240' => 'aly', 'AL8G18540' => 'aly', 'Aqoxy1G02409' => 'aox', 'Aqoxy2G03993' => 'aox', 'Aqoxy3G03357' => 'aox', 'Aqoxy4G00785' => 'aox', 'Aqoxy5G02598' => 'aox', 'Aqoxy6G00132' => 'aox', 'Aqoxy7G01776' => 'aox', 'Aqoxy7G02316' => 'aox', 'Aqoxy7G03973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.12AFKW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B8730' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27IQR1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3F75VG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3RE0GA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41TCQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.527VTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FIR39' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5W8UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DA38EV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ63HS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H1I32C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HC27T5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4M8AP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7N3CZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9UVDZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LS1NQA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT1D4B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SKC4TM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCFV76' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF9Q1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQWD9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1ZM88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WE07RT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YCK7VH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJE6Q6' => 'arhy', 'AT1G28240' => 'ath', 'AT1G34550' => 'ath', 'AT1G53040' => 'ath', 'AT2G02910' => 'ath', 'AT4G09630' => 'ath', 'AT4G38500' => 'ath', 'AT5G42660' => 'ath', 'AT5G46220' => 'ath', 'ATR0152G026' => 'atr', 'ATR0564G343' => 'atr', 'ATR0706G151' => 'atr', 'ATR0733G207' => 'atr', 'ATR0751G234' => 'atr', 'ATR0807G048' => 'atr', 'ATR1091G084' => 'atr', 'Atru.chr10.1229' => 'acertr', 'Atru.chr10.1230' => 'acertr', 'Atru.chr10.1874' => 'acertr', 'Atru.chr11.1808' => 'acertr', 'Atru.chr13.1795' => 'acertr', 'Atru.chr13.570' => 'acertr', 'Atru.chr2.2608' => 'acertr', 'Atru.chr2.2609' => 'acertr', 'Atru.chr5.3428' => 'acertr', 'Atru.chr8.1171' => 'acertr', 'AUR62004651' => 'cqu', 'AUR62008675' => 'cqu', 'AUR62010014' => 'cqu', 'AUR62013004' => 'cqu', 'AUR62014825' => 'cqu', 'AUR62015015' => 'cqu', 'AUR62015151' => 'cqu', 'AUR62017020' => 'cqu', 'AUR62019422' => 'cqu', 'AUR62023570' => 'cqu', 'AUR62025571' => 'cqu', 'AUR62029098' => 'cqu', 'AUR62033863' => 'cqu', 'AUR62034296' => 'cqu', 'AUR62040075' => 'cqu', 'BcaB02g07334' => 'bca', 'BcaB02g10575' => 'bca', 'BcaB03g12119' => 'bca', 'BcaB03g12120' => 'bca', 'BcaB03g13945' => 'bca', 'BcaB04g17123' => 'bca', 'BcaB04g17867' => 'bca', 'BcaB04g19839' => 'bca', 'BcaB07g30317' => 'bca', 'BcaB07g32432' => 'bca', 'BcaB07g33362' => 'bca', 'BcaB08g36611' => 'bca', 'BcaC01g00028' => 'bca', 'BcaC01g01356' => 'bca', 'BcaC01g02034' => 'bca', 'BcaC01g06051' => 'bca', 'BcaC03g16839' => 'bca', 'BcaC03g17176' => 'bca', 'BcaC05g26829' => 'bca', 'BcaC06g31490' => 'bca', 'BcaC06g35344' => 'bca', 'BcaC06g36570' => 'bca', 'BcaC07g37537' => 'bca', 'BcaC08g43491' => 'bca', 'BcaC08g43773' => 'bca', 'BcaNung00234' => 'bca', 'BcaNung01982' => 'bca', 'BcaNung03707' => 'bca', 'BcaNung06454' => 'bca', 'BolC2t10762H' => 'bol', 'BolC2t11191H' => 'bol', 'BolC3t14322H' => 'bol', 'BolC3t19747H' => 'bol', 'BolC3t21425H' => 'bol', 'BolC4t27800H' => 'bol', 'BolC5t31423H' => 'bol', 'BolC6t35951H' => 'bol', 'BolC6t36282H' => 'bol', 'BolC7t40678H' => 'bol', 'BolC7t40679H' => 'bol', 'BolC7t42222H' => 'bol', 'BolC7t43492H' => 'bol', 'BolC7t46785H' => 'bol', 'BolC8t47853H' => 'bol', 'BolC9t56805H' => 'bol', 'BraA02t08000Z' => 'bra', 'BraA02t08341Z' => 'bra', 'BraA03t10936Z' => 'bra', 'BraA03t15657Z' => 'bra', 'BraA04t18100Z' => 'bra', 'BraA05t20523Z' => 'bra', 'BraA06t23353Z' => 'bra', 'BraA06t27473Z' => 'bra', 'BraA06t27769Z' => 'bra', 'BraA07t28928Z' => 'bra', 'BraA08t32236Z' => 'bra', 'BraA08t32841Z' => 'bra', 'BraA08t34524Z' => 'bra', 'BraA09t38742Z' => 'bra', 'BraA09t39295Z' => 'bra', 'C02p47180' => 'bna', 'C02p50990' => 'bna', 'C03p19360' => 'bna', 'C03p74950' => 'bna', 'C03p91000' => 'bna', 'C04p63260' => 'bna', 'C05p27050' => 'bna', 'C06p08750' => 'bna', 'C06p11490' => 'bna', 'C07p02820' => 'bna', 'C07p17180' => 'bna', 'C07p29440' => 'bna', 'C07p63730' => 'bna', 'C09p39260' => 'bna', 'CAN.G1164.34' => 'can', 'CAN.G1164.39' => 'can', 'CAN.G1530.3' => 'can', 'CAN.G162.61' => 'can', 'CAN.G176.6' => 'can', 'CAN.G289.49' => 'can', 'CAN.G370.21' => 'can', 'CAN.G370.22' => 'can', 'CAN.G371.117' => 'can', 'CAN.G58.37' => 'can', 'CAN.G588.98' => 'can', 'CANSAT21G2266' => 'cansat', 'CANSAT25G2799' => 'cansat', 'CANSAT35G0862' => 'cansat', 'CANSAT35G1704' => 'cansat', 'CANSAT35G1760' => 'cansat', 'CANSAT56G3971' => 'cansat', 'CANSAT56G4116' => 'cansat', 'CANSAT80G1259' => 'cansat', 'CARHR027730' => 'chi', 'CARHR033880' => 'chi', 'CARHR043270' => 'chi', 'CARHR145330' => 'chi', 'CARHR145340' => 'chi', 'CARHR175570' => 'chi', 'CARHR181570' => 'chi', 'CARHR258470' => 'chi', 'CARHR260490' => 'chi', 'CARHR294220' => 'chi', 'Carub.0001s2668' => 'cru', 'Carub.0001s3257' => 'cru', 'Carub.0001s4220' => 'cru', 'Carub.0005s0179' => 'cru', 'Carub.0006s2807' => 'cru', 'Carub.0007s0039' => 'cru', 'Carub.0008s0169' => 'cru', 'Carub.0008s0636' => 'cru', 'Ca_00338_v3' => 'car', 'Ca_00542_v3' => 'car', 'Ca_01844_v3' => 'car', 'Ca_10611_v3' => 'car', 'Ca_13326_v3' => 'car', 'Ca_17944_v3' => 'car', 'Ca_18546_v3' => 'car', 'Ca_24219_v3' => 'car', 'Ca_29972_v3' => 'car', 'CBR_g3681' => 'cbr', 'CBR_g40021' => 'cbr', 'Cc01_g08140' => 'ccan', 'Cc02_g13410' => 'ccan', 'Cc02_g37480' => 'ccan', 'Cc05_g12030' => 'ccan', 'Cc09_g03370' => 'ccan', 'Cc09_g10300' => 'ccan', 'Cc10_g03530' => 'ccan', 'Cc10_g11380' => 'ccan', 'CDE01G0176' => 'cde', 'CDE02G0675' => 'cde', 'CDE02G0942' => 'cde', 'CDE02G1153' => 'cde', 'CDE02G4177' => 'cde', 'CDE04G2117' => 'cde', 'CDE04G2736' => 'cde', 'CDE08G1161' => 'cde', 'CDE09G1238' => 'cde', 'Cfa000467' => 'cfa', 'Cfa000947' => 'cfa', 'Cfa004969' => 'cfa', 'Cfa005284' => 'cfa', 'Cfa008993' => 'cfa', 'Cfa018187' => 'cfa', 'Cfa018454' => 'cfa', 'Cfa020585' => 'cfa', 'Ciclev10000424m.g' => 'ccl', 'Ciclev10003605m.g' => 'ccl', 'Ciclev10007828m.g' => 'ccl', 'Ciclev10014620m.g' => 'ccl', 'Ciclev10015169m.g' => 'ccl', 'Ciclev10018291m.g' => 'ccl', 'Ciclev10028256m.g' => 'ccl', 'Ciclev10033822m.g' => 'ccl', 'CiPaw.05G060300' => 'cil', 'CiPaw.05G085000' => 'cil', 'CiPaw.06G083700' => 'cil', 'CiPaw.06G120300' => 'cil', 'CiPaw.09G060500' => 'cil', 'CiPaw.09G123800' => 'cil', 'CiPaw.11G169700' => 'cil', 'CiPaw.12G118300' => 'cil', 'CiPaw.15G071000' => 'cil', 'CiPaw.15G081900' => 'cil', 'ClCG01G024610' => 'cla', 'ClCG03G006070' => 'cla', 'ClCG05G019250' => 'cla', 'ClCG09G009500' => 'cla', 'ClCG11G008200' => 'cla', 'ClCG11G018080' => 'cla', 'COL.COLO4_17373' => 'col', 'COL.COLO4_22994' => 'col', 'COL.COLO4_26389' => 'col', 'COL.COLO4_27170' => 'col', 'COL.COLO4_31074' => 'col', 'COL.COLO4_31465' => 'col', 'COL.COLO4_36438' => 'col', 'COL.COLO4_36439' => 'col', 'Cpa.g.c38781' => 'cpa', 'Cpa.g.sc128.12' => 'cpa', 'Cpa.g.sc166.7' => 'cpa', 'Cpa.g.sc166.8' => 'cpa', 'Cpa.g.sc20.111' => 'cpa', 'Cpa.g.sc27.31' => 'cpa', 'Cpa.g.sc64.36' => 'cpa', 'Cpa.g.sc64.37' => 'cpa', 'Cpa.g.sc66.49' => 'cpa', 'Cpa.g.sc80.64' => 'cpa', 'CsaV3_1G012320' => 'csa', 'CsaV3_2G008480' => 'csa', 'CsaV3_2G033450' => 'csa', 'CsaV3_3G044830' => 'csa', 'CsaV3_4G033710' => 'csa', 'CsaV3_6G051730' => 'csa', 'CsaV3_7G025350' => 'csa', 'CSS0001067' => 'camsi', 'CSS0005996' => 'camsi', 'CSS0006590' => 'camsi', 'CSS0009673' => 'camsi', 'CSS0010201' => 'camsi', 'CSS0010549' => 'camsi', 'CSS0011364' => 'camsi', 'CSS0014473' => 'camsi', 'CSS0014961' => 'camsi', 'CSS0020191' => 'camsi', 'CSS0021165' => 'camsi', 'CSS0022306' => 'camsi', 'CSS0030591' => 'camsi', 'CSS0030696' => 'camsi', 'CSS0032653' => 'camsi', 'CSS0037487' => 'camsi', 'CSS0041102' => 'camsi', 'CSS0041261' => 'camsi', 'CSS0046246' => 'camsi', 'CSS0049256' => 'camsi', 'DCAR_004075' => 'dca', 'DCAR_011538' => 'dca', 'DCAR_019553' => 'dca', 'DCAR_020952' => 'dca', 'DCAR_021739' => 'dca', 'DCAR_027407' => 'dca', 'DCAR_027913' => 'dca', 'DCAR_028066' => 'dca', 'Dinv05899' => 'din', 'Dinv07563' => 'din', 'Dinv08010' => 'din', 'Dinv14125' => 'din', 'Dinv20172' => 'din', 'Dinv30743' => 'din', 'Dinv31229' => 'din', 'Dinv34162' => 'din', 'Dinv36028' => 'din', 'Dinv39368' => 'din', 'Dinv40565' => 'din', 'Dinv41706' => 'din', 'Duzib052G0089' => 'dzi', 'Duzib116G0641' => 'dzi', 'Duzib132G0069' => 'dzi', 'Duzib132G1219' => 'dzi', 'Duzib147G0278' => 'dzi', 'Duzib160G0480' => 'dzi', 'Duzib170G0661' => 'dzi', 'Duzib177G0591' => 'dzi', 'Duzib187G1353' => 'dzi', 'Duzib192G0858' => 'dzi', 'Duzib192G0883' => 'dzi', 'Duzib213G0506' => 'dzi', 'Duzib235G0289' => 'dzi', 'Duzib251G0422' => 'dzi', 'ECA232G3898' => 'eca', 'ECA233G5950' => 'eca', 'ECA234G1699' => 'eca', 'ECA234G2421' => 'eca', 'ECA236G0426' => 'eca', 'ECA236G4331' => 'eca', 'ECA248G2573' => 'eca', 'EL10Ac1g00077' => 'bvu', 'EL10Ac1g01746' => 'bvu', 'EL10Ac2g03464' => 'bvu', 'EL10Ac4g08176' => 'bvu', 'EL10Ac7g17521' => 'bvu', 'EL10Ac8g20386' => 'bvu', 'EL10Ac9g21343' => 'bvu', 'EL10Ac9g22688' => 'bvu', 'Eucgr.B03434' => 'egr', 'Eucgr.D00618' => 'egr', 'Eucgr.E02395' => 'egr', 'Eucgr.F01129' => 'egr', 'Eucgr.F02622' => 'egr', 'Eucgr.F04207' => 'egr', 'FAN01G0570' => 'fan', 'FAN03G3351' => 'fan', 'FAN06G3702' => 'fan', 'FAN07G2149' => 'fan', 'FAN10G3758' => 'fan', 'FAN11G1170' => 'fan', 'FAN11G2050' => 'fan', 'FAN11G2724' => 'fan', 'FAN12G1700' => 'fan', 'FAN12G2028' => 'fan', 'FAN15G1160' => 'fan', 'FAN15G3063' => 'fan', 'FAN16G2540' => 'fan', 'FAN16G3077' => 'fan', 'FAN16G3624' => 'fan', 'FAN17G0221' => 'fan', 'FAN20G2492' => 'fan', 'FAN20G2905' => 'fan', 'FAN21G0548' => 'fan', 'FAN21G1300' => 'fan', 'FAN22G0077' => 'fan', 'FAN22G1315' => 'fan', 'FAN24G1280' => 'fan', 'FAN24G1445' => 'fan', 'FAN24G3527' => 'fan', 'FAN25G0464' => 'fan', 'FAN25G2885' => 'fan', 'FAN25G3270' => 'fan', 'FAN27G1101' => 'fan', 'FAN27G2846' => 'fan', 'FAN27G3524' => 'fan', 'FvH4_2g11770' => 'fve', 'FvH4_2g15630' => 'fve', 'FvH4_3g05570' => 'fve', 'FvH4_3g09110' => 'fve', 'FvH4_3g19940' => 'fve', 'FvH4_4g04821' => 'fve', 'FvH4_4g31480' => 'fve', 'FvH4_7g01740' => 'fve', 'Glyma.05G130400' => 'gma', 'Glyma.05G156400' => 'gma', 'Glyma.07G197000' => 'gma', 'Glyma.08G085151' => 'gma', 'Glyma.08G114500' => 'gma', 'Glyma.08G300400' => 'gma', 'Glyma.10G215800' => 'gma', 'Glyma.12G224400' => 'gma', 'Glyma.13G179300' => 'gma', 'Glyma.13G218151' => 'gma', 'Glyma.13G238800' => 'gma', 'Glyma.13G276900' => 'gma', 'Glyma.14G078200' => 'gma', 'Glyma.15G074500' => 'gma', 'Glyma.15G094100' => 'gma', 'Glyma.17G247200' => 'gma', 'Glyma.18G120100' => 'gma', 'Glyma.20G176000' => 'gma', 'Gohir.A01G063600' => 'ghi', 'Gohir.A01G170301' => 'ghi', 'Gohir.A02G060500' => 'ghi', 'Gohir.A05G133850' => 'ghi', 'Gohir.A05G161400' => 'ghi', 'Gohir.A06G012900' => 'ghi', 'Gohir.A06G035901' => 'ghi', 'Gohir.A06G127100' => 'ghi', 'Gohir.A06G210500' => 'ghi', 'Gohir.A08G008650' => 'ghi', 'Gohir.A09G072700' => 'ghi', 'Gohir.A09G088301' => 'ghi', 'Gohir.A10G040600' => 'ghi', 'Gohir.A12G036300' => 'ghi', 'Gohir.A12G143350' => 'ghi', 'Gohir.A12G165500' => 'ghi', 'Gohir.A13G145700' => 'ghi', 'Gohir.D01G050000' => 'ghi', 'Gohir.D01G051366' => 'ghi', 'Gohir.D01G161350' => 'ghi', 'Gohir.D02G065900' => 'ghi', 'Gohir.D05G164200' => 'ghi', 'Gohir.D05G355500' => 'ghi', 'Gohir.D06G010400' => 'ghi', 'Gohir.D06G111250' => 'ghi', 'Gohir.D06G132000' => 'ghi', 'Gohir.D06G210500' => 'ghi', 'Gohir.D07G165675' => 'ghi', 'Gohir.D08G062240' => 'ghi', 'Gohir.D08G086101' => 'ghi', 'Gohir.D08G138060' => 'ghi', 'Gohir.D09G072300' => 'ghi', 'Gohir.D10G041400' => 'ghi', 'Gohir.D11G191020' => 'ghi', 'Gohir.D11G212066' => 'ghi', 'Gohir.D12G036300' => 'ghi', 'Gohir.D12G168600' => 'ghi', 'Gohir.D13G150600' => 'ghi', 'Gorai.001G057300' => 'gra', 'Gorai.002G069900' => 'gra', 'Gorai.002G200000' => 'gra', 'Gorai.003G067600' => 'gra', 'Gorai.005G074800' => 'gra', 'Gorai.006G087300' => 'gra', 'Gorai.008G037500' => 'gra', 'Gorai.008G181400' => 'gra', 'Gorai.009G169400' => 'gra', 'Gorai.009G387900' => 'gra', 'Gorai.010G013300' => 'gra', 'Gorai.010G153800' => 'gra', 'Gorai.010G255800' => 'gra', 'Gorai.011G043700' => 'gra', 'Gorai.011G198900' => 'gra', 'Gorai.013G168400' => 'gra', 'GSVIVG01005212001' => 'vvi', 'GSVIVG01006163001' => 'vvi', 'GSVIVG01009625001' => 'vvi', 'GSVIVG01014338001' => 'vvi', 'GSVIVG01020005001' => 'vvi', 'GSVIVG01021450001' => 'vvi', 'GSVIVG01023975001' => 'vvi', 'GSVIVG01034490001' => 'vvi', 'HanXRQChr04g0112071' => 'han', 'HanXRQChr05g0131151' => 'han', 'HanXRQChr09g0262371' => 'han', 'HanXRQChr09g0268401' => 'han', 'HanXRQChr10g0279241' => 'han', 'HanXRQChr10g0297961' => 'han', 'HanXRQChr11g0326231' => 'han', 'HanXRQChr11g0328471' => 'han', 'HanXRQChr16g0507941' => 'han', 'HanXRQChr17g0560211' => 'han', 'Haze_02108' => 'cav', 'Haze_02428' => 'cav', 'Haze_05593' => 'cav', 'Haze_06448' => 'cav', 'Haze_09427' => 'cav', 'Haze_12022' => 'cav', 'Haze_17612' => 'cav', 'Haze_17928' => 'cav', 'Hma1.2p1_0032F.1_g019250' => 'hma', 'Hma1.2p1_0163F.1_g072690' => 'hma', 'Hma1.2p1_0265F.1_g106710' => 'hma', 'Hma1.2p1_0286F.1_g113970' => 'hma', 'Hma1.2p1_0363F.1_g136640' => 'hma', 'Hma1.2p1_0584F.1_g183470' => 'hma', 'Hma1.2p1_0885F.1_g232570' => 'hma', 'HPP92_006022' => 'vpl', 'HPP92_007320' => 'vpl', 'HPP92_011521' => 'vpl', 'HPP92_019387' => 'vpl', 'HPP92_024038' => 'vpl', 'Hund05891' => 'sun', 'Hund06450' => 'sun', 'Hund12053' => 'sun', 'Hund16800' => 'sun', 'Hund21222' => 'sun', 'Hund22896' => 'sun', 'Hund23746' => 'sun', 'Hund27083' => 'sun', 'Lalb_Chr02g0141831' => 'lal', 'Lalb_Chr02g0141841' => 'lal', 'Lalb_Chr05g0220411' => 'lal', 'Lalb_Chr06g0162081' => 'lal', 'Lalb_Chr09g0327651' => 'lal', 'Lalb_Chr13g0295051' => 'lal', 'Lalb_Chr15g0086801' => 'lal', 'Lalb_Chr16g0383781' => 'lal', 'Lalb_Chr16g0383791' => 'lal', 'Lalb_Chr18g0055441' => 'lal', 'Lalb_Chr18g0059611' => 'lal', 'Lalb_Chr20g0109661' => 'lal', 'Lalb_Chr20g0109831' => 'lal', 'Lalb_Chr20g0121871' => 'lal', 'Lalb_Chr22g0355361' => 'lal', 'Lalb_Chr25g0286371' => 'lal', 'Lj1A1187G43' => 'lonja', 'Lj1A1205T50' => 'lonja', 'Lj1A800G33' => 'lonja', 'Lj1C1187T7' => 'lonja', 'Lj1C843T11' => 'lonja', 'Lj1g0010940' => 'lja', 'Lj2A288T69' => 'lonja', 'Lj3g0024276' => 'lja', 'Lj4A47T76' => 'lonja', 'Lj4g0005805' => 'lja', 'Lj4g0006097' => 'lja', 'Lj4g0008528' => 'lja', 'Lj4g0024907' => 'lja', 'Lj5g0012472' => 'lja', 'Lj5g0018648' => 'lja', 'Lj6C789G1' => 'lonja', 'Lj6g0004000' => 'lja', 'Lj7A292G67' => 'lonja', 'Lj7A292T64' => 'lonja', 'Lj9A400T58' => 'lonja', 'Lsat_1_v5_gn_1_126181' => 'lsa', 'Lsat_1_v5_gn_4_123041' => 'lsa', 'Lsat_1_v5_gn_4_133620' => 'lsa', 'Lsat_1_v5_gn_4_53221' => 'lsa', 'Lsat_1_v5_gn_4_71961' => 'lsa', 'Lsat_1_v5_gn_7_105241' => 'lsa', 'Lsat_1_v5_gn_7_21361' => 'lsa', 'Lsat_1_v5_gn_7_28860' => 'lsa', 'Lsat_1_v5_gn_7_31260' => 'lsa', 'Lsat_1_v5_gn_8_52801' => 'lsa', 'Manes.02G191400' => 'mes', 'Manes.03G110100' => 'mes', 'Manes.04G071100' => 'mes', 'Manes.05G100500' => 'mes', 'Manes.05G164700' => 'mes', 'Manes.15G087000' => 'mes', 'Manes.15G121500' => 'mes', 'Manes.16G028300' => 'mes', 'Manes.17G046100' => 'mes', 'Manes.17G069800' => 'mes', 'Manes.18G100500' => 'mes', 'Mapoly0002s0109' => 'mpo', 'Mapoly0024s0007' => 'mpo', 'Mapoly0089s0032' => 'mpo', 'MBI04_g42241_MAGBIO' => 'mbi', 'MBI05_g11988_MAGBIO' => 'mbi', 'MBI05_g35452_MAGBIO' => 'mbi', 'MBI07_g30179_MAGBIO' => 'mbi', 'MBI07_g35859_MAGBIO' => 'mbi', 'MBI07_g35860_MAGBIO' => 'mbi', 'MBI07_g37166_MAGBIO' => 'mbi', 'MBI08_g18172_MAGBIO' => 'mbi', 'MBI09_g08441_MAGBIO' => 'mbi', 'MBI13_g01676_MAGBIO' => 'mbi', 'MBI14_g42955_MAGBIO' => 'mbi', 'MBI16_g13161_MAGBIO' => 'mbi', 'MBI17_g27204_MAGBIO' => 'mbi', 'MBI19_g21595_MAGBIO' => 'mbi', 'MD00G1148400' => 'mdo', 'MD02G1301200' => 'mdo', 'MD03G1227800' => 'mdo', 'MD05G1041100' => 'mdo', 'MD05G1124800' => 'mdo', 'MD05G1284000' => 'mdo', 'MD05G1338800' => 'mdo', 'MD05G1338900' => 'mdo', 'MD07G1022800' => 'mdo', 'MD10G1047500' => 'mdo', 'MD10G1127500' => 'mdo', 'MD10G1262300' => 'mdo', 'MD10G1293800' => 'mdo', 'MD16G1074300' => 'mdo', 'Medtr1g021670' => 'mtr', 'Medtr1g096320' => 'mtr', 'Medtr2g013690' => 'mtr', 'Medtr2g019450' => 'mtr', 'Medtr2g085170' => 'mtr', 'Medtr4g088785' => 'mtr', 'Medtr8g055930' => 'mtr', 'Medtr8g085850' => 'mtr', 'MELO3C002605.2' => 'cme', 'MELO3C003891.2' => 'cme', 'MELO3C004012.2' => 'cme', 'MELO3C007134.2' => 'cme', 'MELO3C008118.2' => 'cme', 'MELO3C016700.2' => 'cme', 'MELO3C024127.2' => 'cme', 'MELO3C033361.2' => 'cme', 'MELO3C033362.2' => 'cme', 'Migut.C00430' => 'egut', 'Migut.C01246' => 'egut', 'Migut.E00101' => 'egut', 'Migut.H01486' => 'egut', 'Migut.H01939' => 'egut', 'Migut.K00360' => 'egut', 'Migut.M00910' => 'egut', 'Migut.M01139' => 'egut', 'Migut.N02677' => 'egut', 'MSTRG.13252' => 'ama', 'MSTRG.14701' => 'ama', 'MSTRG.1521' => 'ama', 'MSTRG.15884' => 'ama', 'MSTRG.16242' => 'ama', 'MSTRG.22285' => 'ama', 'MSTRG.22444' => 'ama', 'MSTRG.2349' => 'ama', 'MSTRG.26308' => 'ama', 'MSTRG.28296' => 'ama', 'MSTRG.9895' => 'ama', 'Nitab4.5_0000110g0060' => 'nta', 'Nitab4.5_0000420g0130' => 'nta', 'Nitab4.5_0000422g0030' => 'nta', 'Nitab4.5_0000560g0180' => 'nta', 'Nitab4.5_0000703g0100' => 'nta', 'Nitab4.5_0000786g0200' => 'nta', 'Nitab4.5_0001336g0020' => 'nta', 'Nitab4.5_0001796g0030' => 'nta', 'Nitab4.5_0003348g0060' => 'nta', 'Nitab4.5_0003698g0040' => 'nta', 'Nitab4.5_0003942g0090' => 'nta', 'Nitab4.5_0004775g0070' => 'nta', 'Nitab4.5_0004864g0030' => 'nta', 'Nitab4.5_0005615g0020' => 'nta', 'Nitab4.5_0009288g0030' => 'nta', 'Nitab4.5_0009341g0010' => 'nta', 'Nitab4.5_0009535g0010' => 'nta', 'Nn1g03995' => 'nnu', 'Nn1g04100' => 'nnu', 'Nn1g06530' => 'nnu', 'Nn3g16404' => 'nnu', 'Nn3g17212' => 'nnu', 'Nn3g20776' => 'nnu', 'Nn3g21923' => 'nnu', 'Nn5g27737' => 'nnu', 'Nn5g29461' => 'nnu', 'Nn7g38355' => 'nnu', 'Nn8g39873' => 'nnu', 'Oeu000548.2' => 'oeu', 'Oeu004672.1' => 'oeu', 'Oeu015605.2' => 'oeu', 'Oeu016092.1' => 'oeu', 'Oeu017879.3' => 'oeu', 'Oeu024910.1' => 'oeu', 'Oeu028965.1' => 'oeu', 'Oeu031269.1' => 'oeu', 'Oeu031270.1' => 'oeu', 'Oeu032535.1' => 'oeu', 'Oeu034151.1' => 'oeu', 'Oeu034152.1' => 'oeu', 'Oeu034588.2' => 'oeu', 'Oeu050846.1' => 'oeu', 'Oeu050849.2' => 'oeu', 'Oeu051063.2' => 'oeu', 'Oeu052368.1' => 'oeu', 'Oeu052370.1' => 'oeu', 'Os01g0210400' => 'osa', 'Os01g0304300' => 'osa', 'Os01g0749100' => 'osa', 'Os02g0745800' => 'osa', 'Os03g0769050' => 'osa', 'Os05g0531500' => 'osa', 'Os06g0724300' => 'osa', 'Os11g0198100' => 'osa', 'Peaxi162Scf00069g01425' => 'pax', 'Peaxi162Scf00280g00811' => 'pax', 'Peaxi162Scf00310g00615' => 'pax', 'Peaxi162Scf00362g00542' => 'pax', 'Peaxi162Scf00461g00310' => 'pax', 'Peaxi162Scf00530g00118' => 'pax', 'Peaxi162Scf00541g00057' => 'pax', 'Peaxi162Scf00661g00017' => 'pax', 'Peaxi162Scf00926g00027' => 'pax', 'Peaxi162Scf01064g00263' => 'pax', 'Peaxi162Scf01211g00135' => 'pax', 'PGR004G2336' => 'pgr', 'PGR042G0327' => 'pgr', 'PGR042G1957' => 'pgr', 'PGR042G2003' => 'pgr', 'PGR042G3929' => 'pgr', 'PGR083G1137' => 'pgr', 'PGR083G1364' => 'pgr', 'PGSC0003DMG400003381' => 'stu', 'PGSC0003DMG400003417' => 'stu', 'PGSC0003DMG400008981' => 'stu', 'PGSC0003DMG400012417' => 'stu', 'PGSC0003DMG400012823' => 'stu', 'PGSC0003DMG400016885' => 'stu', 'PGSC0003DMG400022812' => 'stu', 'PGSC0003DMG400029726' => 'stu', 'PGSC0003DMG401009243' => 'stu', 'PGSC0003DMG401031505' => 'stu', 'PGSC0003DMG402031505' => 'stu', 'Phvul.001G017600' => 'pvu', 'Phvul.002G193500' => 'pvu', 'Phvul.002G228900' => 'pvu', 'Phvul.002G236800' => 'pvu', 'Phvul.003G049500' => 'pvu', 'Phvul.005G072000' => 'pvu', 'Phvul.006G164800' => 'pvu', 'Phvul.006G185100' => 'pvu', 'Phvul.007G090000' => 'pvu', 'Potri.001G399800' => 'ptr', 'Potri.002G149900' => 'ptr', 'Potri.004G044100' => 'ptr', 'Potri.004G177600' => 'ptr', 'Potri.009G138000' => 'ptr', 'Potri.010G094000' => 'ptr', 'Potri.011G053000' => 'ptr', 'Potri.011G119300' => 'ptr', 'Potri.013G113700' => 'ptr', 'Potri.018G107800' => 'ptr', 'Potri.019G084100' => 'ptr', 'Pp3c14_23720' => 'ppa', 'Pp3c16_6340' => 'ppa', 'Pp3c23_13420' => 'ppa', 'Pp3c24_2740' => 'ppa', 'Pp3c25_860' => 'ppa', 'Pp3c8_21750' => 'ppa', 'Prupe.1G273000' => 'ppe', 'Prupe.1G273700' => 'ppe', 'Prupe.1G274100' => 'ppe', 'Prupe.2G023300' => 'ppe', 'Prupe.4G048000' => 'ppe', 'Prupe.4G080400' => 'ppe', 'Prupe.4G181200' => 'ppe', 'Prupe.8G056900' => 'ppe', 'Prupe.8G168700' => 'ppe', 'Psat1g189080' => 'psa', 'Psat1g204760' => 'psa', 'Psat4g175560' => 'psa', 'Psat4g177720' => 'psa', 'Psat5g244240' => 'psa', 'Psat6g010720' => 'psa', 'Psat6g187200' => 'psa', 'Psat7g072040' => 'psa', 'PSO017G3501' => 'pso', 'PSO063G2148' => 'pso', 'PSO063G5608' => 'pso', 'PSO210G6392' => 'pso', 'PSO541G2319' => 'pso', 'PSO541G2836' => 'pso', 'PSO541G4012' => 'pso', 'PSO541G6253' => 'pso', 'PSO675G0580' => 'pso', 'PSO675G0856' => 'pso', 'PSO675G5635' => 'pso', 'PSO675G9157' => 'pso', 'PSO832G1660' => 'pso', 'PSO832G1969' => 'pso', 'QL02p007186' => 'qlo', 'QL02p033904' => 'qlo', 'QL03p064391' => 'qlo', 'QL05p040593' => 'qlo', 'QL05p058242' => 'qlo', 'QL08p021825' => 'qlo', 'QL11p004981' => 'qlo', 'RcHm_v2.0_Chr1g0318301' => 'rch', 'RcHm_v2.0_Chr4g0418501' => 'rch', 'RcHm_v2.0_Chr4g0439971' => 'rch', 'RcHm_v2.0_Chr5g0008541' => 'rch', 'RcHm_v2.0_Chr5g0014101' => 'rch', 'RcHm_v2.0_Chr5g0014131' => 'rch', 'RcHm_v2.0_Chr5g0033621' => 'rch', 'RcHm_v2.0_Chr6g0272041' => 'rch', 'RcHm_v2.0_Chr6g0278831' => 'rch', 'Rhsim02G0130400' => 'rsi', 'Rhsim02G0171100' => 'rsi', 'Rhsim05G0053000' => 'rsi', 'Rhsim05G0053100' => 'rsi', 'Rhsim06G0096500' => 'rsi', 'Rhsim06G0096600' => 'rsi', 'Rhsim06G0199100' => 'rsi', 'Rhsim12G0062300' => 'rsi', 'Rhsim12G0062800' => 'rsi', 'Sabra02G0118600' => 'sbr', 'Sabra04G0027300' => 'sbr', 'Sabra04G0119500' => 'sbr', 'Sabra08G0112500' => 'sbr', 'Sabra11G0036800' => 'sbr', 'Sabra11G0103800' => 'sbr', 'Sabra13G0096300' => 'sbr', 'Sabra16G0262300' => 'sbr', 'Sabra18G0091700' => 'sbr', 'Sabra19G0095400' => 'sbr', 'SalBow6G3080' => 'sbo', 'SalBow7G1157' => 'sbo', 'SalBow7G2123' => 'sbo', 'SalBow7G2285' => 'sbo', 'SalBow7G3537' => 'sbo', 'SalBow8G2947' => 'sbo', 'SalBow8G4463' => 'sbo', 'SalBow8G5466' => 'sbo', 'Sc01g0001750' => 'sci', 'Sc02g0006640' => 'sci', 'Sc02g0006670' => 'sci', 'Sc04g0008220' => 'sci', 'Sc05g0006190' => 'sci', 'Sc08g0002760' => 'sci', 'Sc17g0006170' => 'sci', 'Sc22g0002050' => 'sci', 'Sc23g0001190' => 'sci', 'Sc24g0000980' => 'sci', 'Sed0006245' => 'sed', 'Sed0007543' => 'sed', 'Sed0009411' => 'sed', 'Sed0010765' => 'sed', 'Sed0012944' => 'sed', 'Sed0014682' => 'sed', 'Sed0016174' => 'sed', 'Sed0016796' => 'sed', 'Sed0020317' => 'sed', 'Sed0021467' => 'sed', 'SEGI_01316' => 'sgi', 'SEGI_03374' => 'sgi', 'SEGI_16265' => 'sgi', 'SEGI_18569' => 'sgi', 'SEGI_20351' => 'sgi', 'SEGI_26395' => 'sgi', 'SEGI_29469' => 'sgi', 'SEGI_34771' => 'sgi', 'SEGI_36769' => 'sgi', 'SEGI_37139' => 'sgi', 'SGA_v2.0_scaffold100G29687' => 'sas', 'SGA_v2.0_scaffold118G32472' => 'sas', 'SGA_v2.0_scaffold14G07051' => 'sas', 'SGA_v2.0_scaffold183G39845' => 'sas', 'SGA_v2.0_scaffold1G00174' => 'sas', 'SGA_v2.0_scaffold22G09714' => 'sas', 'SGA_v2.0_scaffold333G48992' => 'sas', 'SGA_v2.0_scaffold46G17491' => 'sas', 'SGA_v2.0_scaffold49G18294' => 'sas', 'SGA_v2.0_scaffold63G21658' => 'sas', 'SHI01741' => 'shi', 'SHI05771' => 'shi', 'SHI18077' => 'shi', 'SHI20525' => 'shi', 'SHI20527' => 'shi', 'SHI20528' => 'shi', 'SMO172G0185' => 'smo', 'SMO198G0020' => 'smo', 'SMO351G0006' => 'smo', 'SMO356G0118' => 'smo', 'SMO358G0296' => 'smo', 'SMO367G0079' => 'smo', 'SMO367G1277' => 'smo', 'Solyc01g014220.3' => 'sly', 'Solyc01g111770.2' => 'sly', 'Solyc02g078180.3' => 'sly', 'Solyc03g006430.3' => 'sly', 'Solyc03g006456.1' => 'sly', 'Solyc03g079860.2' => 'sly', 'Solyc04g079770.3' => 'sly', 'Solyc05g007430.4' => 'sly', 'Solyc07g063150.3' => 'sly', 'Solyc08g016620.3' => 'sly', 'Solyc09g057590.3' => 'sly', 'Solyc09g057600.1' => 'sly', 'Solyc10g009050.3' => 'sly', 'Solyc11g017420.2' => 'sly', 'Sopen01g053810' => 'spe', 'Sopen02g023040' => 'spe', 'Sopen03g002440' => 'spe', 'Sopen04g033350' => 'spe', 'Sopen05g003310' => 'spe', 'Sopen07g004050' => 'spe', 'Sopen07g031340' => 'spe', 'Sopen08g006990' => 'spe', 'Sopen10g004830' => 'spe', 'Sopen11g009370' => 'spe', 'Sp1g24450' => 'spa', 'Sp1g29670' => 'spa', 'Sp1g39600' => 'spa', 'Sp2g11080' => 'spa', 'Sp2g13970' => 'spa', 'Sp4g16130' => 'spa', 'Sp6g13080' => 'spa', 'Sp7g37270' => 'spa', 'TAR371G0065' => 'tar', 'TAR376G0340' => 'tar', 'TAR376G0435' => 'tar', 'TAR381G0002' => 'tar', 'TAR381G1236' => 'tar', 'TAR624G0055' => 'tar', 'TAR624G0324' => 'tar', 'TAR624G0696' => 'tar', 'TAR624G0906' => 'tar', 'TAR625G0107' => 'tar', 'TAR626G0015' => 'tar', 'TAR626G1356' => 'tar', 'TAR627G0888' => 'tar', 'TAR628G0399' => 'tar', 'TAR628G1327' => 'tar', 'TAR629G2831' => 'tar', 'TAR629G2874' => 'tar', 'TAR633G1432' => 'tar', 'TAR633G2771' => 'tar', 'THA.LOC104803394' => 'tha', 'THA.LOC104805153' => 'tha', 'THA.LOC104806784' => 'tha', 'THA.LOC104810473' => 'tha', 'THA.LOC104813100' => 'tha', 'THA.LOC104814215' => 'tha', 'THA.LOC104815554' => 'tha', 'THA.LOC104820544' => 'tha', 'THA.LOC104824754' => 'tha', 'THA.LOC104827717' => 'tha', 'Thecc.02G031400' => 'tca', 'Thecc.02G055900' => 'tca', 'Thecc.02G350800' => 'tca', 'Thecc.06G150900' => 'tca', 'Thecc.06G186600' => 'tca', 'Thecc.07G089600' => 'tca', 'Thecc.08G020400' => 'tca', 'Thecc.08G182100' => 'tca', 'Thhalv10000873m.g' => 'esa', 'Thhalv10004185m.g' => 'esa', 'Thhalv10006981m.g' => 'esa', 'Thhalv10007204m.g' => 'esa', 'Thhalv10011374m.g' => 'esa', 'Thhalv10013482m.g' => 'esa', 'Thhalv10017801m.g' => 'esa', 'Thhalv10024983m.g' => 'esa', 'TPR.G12072' => 'tpr', 'TPR.G15769' => 'tpr', 'TPR.G16504' => 'tpr', 'TPR.G16506' => 'tpr', 'TPR.G24345' => 'tpr', 'TPR.G26666' => 'tpr', 'TPR.G27320' => 'tpr', 'TPR.G31819' => 'tpr', 'TPR.G38879' => 'tpr', 'TPR.G39015' => 'tpr', 'TPR.G8819' => 'tpr', 'TWI09G0924' => 'twi', 'TWI12G0811' => 'twi', 'TWI12G1294' => 'twi', 'TWI31G0150' => 'twi', 'TWI36G1262' => 'twi', 'TWI38G1287' => 'twi', 'TWI38G1633' => 'twi', 'TWI38G1982' => 'twi', 'TWI39G0116' => 'twi', 'TWI60G1011' => 'twi', 'TWI63G0171' => 'twi', 'TWI73G0839' => 'twi', 'TWI79G1511' => 'twi', 'unitig_0.g915' => 'ugi', 'unitig_0.g916' => 'ugi', 'unitig_21.g20219' => 'ugi', 'unitig_21.g20416' => 'ugi', 'unitig_578.g16132' => 'ugi', 'unitig_578.g16718' => 'ugi', 'unitig_62.g23481' => 'ugi', 'unitig_744.g24535' => 'ugi', 'unitig_749.g13525' => 'ugi', 'vmacro01248' => 'vma', 'vmacro02290' => 'vma', 'vmacro10946' => 'vma', 'vmacro11865' => 'vma', 'vmacro12493' => 'vma', 'vmacro17322' => 'vma', 'vmacro21599' => 'vma', 'vmacro23041' => 'vma', 'VMungo0251G0004' => 'vmu', 'VMungo0251G2639' => 'vmu', 'VMungo0251G2967' => 'vmu', 'VMungo0540G0864' => 'vmu', 'VMungo0540G1569' => 'vmu', 'VMungo0647G0317' => 'vmu', 'VMungo0720G1373' => 'vmu', 'VMungo0720G1508' => 'vmu', 'VMungo1080G0485' => 'vmu', 'VMungo1215G3177' => 'vmu', 'Zm00001eb112600' => 'zma', 'Zm00001eb120220' => 'zma', 'Zm00001eb153240' => 'zma', 'Zm00001eb168880' => 'zma', 'Zm00001eb213920' => 'zma', 'Zm00001eb228280' => 'zma', 'Zm00001eb254580' => 'zma', 'Zm00001eb272180' => 'zma', 'Zm00001eb293190' => 'zma', 'Zm00001eb322930' => 'zma', 'Zm00001eb353360' => 'zma', 'Zm00001eb353390' => 'zma', 'Zm00001eb353430' => 'zma', 'Zm00001eb353440' => 'zma', 'Zm00001eb353780' => 'zma' ) $gf_id = 'HOM05D000499' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000499' ) $data_identifier = 'HOM05D000499' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 29, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 12, 'amhyb' => (int) 8, 'aly' => (int) 12, 'aox' => (int) 9, 'arhy' => (int) 26, 'ath' => (int) 8, 'atr' => (int) 7, 'acertr' => (int) 10, 'cqu' => (int) 15, 'bca' => (int) 29, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 11, 'cansat' => (int) 8, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 9, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 8, 'cpa' => (int) 10, 'csa' => (int) 7, 'camsi' => (int) 20, 'dca' => (int) 8, 'din' => (int) 12, 'dzi' => (int) 14, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 6, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 38, 'gra' => (int) 16, 'vvi' => (int) 8, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 5, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 11, 'lja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 11, 'mpo' => (int) 3, 'mbi' => (int) 14, 'mdo' => (int) 14, 'mtr' => (int) 8, 'cme' => (int) 9, 'egut' => (int) 9, 'ama' => (int) 11, 'nta' => (int) 17, 'nnu' => (int) 11, 'oeu' => (int) 18, 'osa' => (int) 8, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 6, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 9, 'rsi' => (int) 9, 'sbr' => (int) 10, 'sbo' => (int) 8, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 10, 'sas' => (int) 10, 'shi' => (int) 6, 'smo' => (int) 7, 'sly' => (int) 14, 'spe' => (int) 10, 'spa' => (int) 8, 'tar' => (int) 19, 'tha' => (int) 10, 'tca' => (int) 8, 'esa' => (int) 8, 'tpr' => (int) 11, 'twi' => (int) 13, 'ugi' => (int) 9, 'vma' => (int) 8, 'vmu' => (int) 10, 'zma' => (int) 15 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb353780' $species_info = array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ) $local_species = 'sci' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000499', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1066', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p29780' => 'bna', 'A02p33180' => 'bna', 'A03p16470' => 'bna', 'A03p66010' => 'bna', 'A04p25970' => 'bna', 'A06p01270' => 'bna', 'A06p46080' => 'bna', 'A07p11400' => 'bna', 'A08p01840' => 'bna', 'A08p08230' => 'bna', 'A08p25740' => 'bna', 'A09p32070' => 'bna', 'A09p37830' => 'bna', 'A09p42840' => 'bna', 'A09p42850' => 'bna', 'Aa31LG10G2060' => 'aar', 'Aa31LG2G7410' => 'aar', 'Aa31LG6G10200' => 'aar', 'Aa31LG6G16680' => 'aar', 'Aa31LG6G8470' => 'aar', 'Aa31LG9G12730' => 'aar', 'Aa31LG9G13680' => 'aar', 'Aa31LG9G14920' => 'aar', 'Aa31LG9G6650' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4977' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5467' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3254' => 'aag', 'Actinidia02578' => 'ach', 'Actinidia07693' => 'ach', 'Actinidia08413' => 'ach', 'Actinidia08414' => 'ach', 'Actinidia15289' => 'ach', 'Actinidia19871' => 'ach', 'Actinidia21475' => 'ach', 'Actinidia22576' => 'ach', 'Actinidia28327' => 'ach', 'Actinidia32491' => 'ach', 'Actinidia39463' => 'ach', 'Actinidia39571' => 'ach', 'Ah.01g013750' => 'amhyb', 'Ah.01g023210' => 'amhyb', 'Ah.04g164850' => 'amhyb', 'Ah.05g178060' => 'amhyb', 'Ah.07g204270' => 'amhyb', 'Ah.07g208480' => 'amhyb', 'Ah.09g237410' => 'amhyb', 'Ah.14g089460' => 'amhyb', 'AL1G41790' => 'aly', 'AL1G49050' => 'aly', 'AL1G53810' => 'aly', 'AL1G61400' => 'aly', 'AL4G18580' => 'aly', 'AL5G12510' => 'aly', 'AL5G12540' => 'aly', 'AL6G43230' => 'aly', 'AL7G10370' => 'aly', 'AL7G19250' => 'aly', 'AL8G12240' => 'aly', 'AL8G18540' => 'aly', 'Aqoxy1G02409' => 'aox', 'Aqoxy2G03993' => 'aox', 'Aqoxy3G03357' => 'aox', 'Aqoxy4G00785' => 'aox', 'Aqoxy5G02598' => 'aox', 'Aqoxy6G00132' => 'aox', 'Aqoxy7G01776' => 'aox', 'Aqoxy7G02316' => 'aox', 'Aqoxy7G03973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.12AFKW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B8730' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27IQR1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3F75VG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3RE0GA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41TCQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.527VTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FIR39' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5W8UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DA38EV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ63HS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H1I32C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HC27T5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4M8AP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7N3CZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9UVDZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LS1NQA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT1D4B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SKC4TM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCFV76' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF9Q1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQWD9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1ZM88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WE07RT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YCK7VH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJE6Q6' => 'arhy', 'AT1G28240' => 'ath', 'AT1G34550' => 'ath', 'AT1G53040' => 'ath', 'AT2G02910' => 'ath', 'AT4G09630' => 'ath', 'AT4G38500' => 'ath', 'AT5G42660' => 'ath', 'AT5G46220' => 'ath', 'ATR0152G026' => 'atr', 'ATR0564G343' => 'atr', 'ATR0706G151' => 'atr', 'ATR0733G207' => 'atr', 'ATR0751G234' => 'atr', 'ATR0807G048' => 'atr', 'ATR1091G084' => 'atr', 'Atru.chr10.1229' => 'acertr', 'Atru.chr10.1230' => 'acertr', 'Atru.chr10.1874' => 'acertr', 'Atru.chr11.1808' => 'acertr', 'Atru.chr13.1795' => 'acertr', 'Atru.chr13.570' => 'acertr', 'Atru.chr2.2608' => 'acertr', 'Atru.chr2.2609' => 'acertr', 'Atru.chr5.3428' => 'acertr', 'Atru.chr8.1171' => 'acertr', 'AUR62004651' => 'cqu', 'AUR62008675' => 'cqu', 'AUR62010014' => 'cqu', 'AUR62013004' => 'cqu', 'AUR62014825' => 'cqu', 'AUR62015015' => 'cqu', 'AUR62015151' => 'cqu', 'AUR62017020' => 'cqu', 'AUR62019422' => 'cqu', 'AUR62023570' => 'cqu', 'AUR62025571' => 'cqu', 'AUR62029098' => 'cqu', 'AUR62033863' => 'cqu', 'AUR62034296' => 'cqu', 'AUR62040075' => 'cqu', 'BcaB02g07334' => 'bca', 'BcaB02g10575' => 'bca', 'BcaB03g12119' => 'bca', 'BcaB03g12120' => 'bca', 'BcaB03g13945' => 'bca', 'BcaB04g17123' => 'bca', 'BcaB04g17867' => 'bca', 'BcaB04g19839' => 'bca', 'BcaB07g30317' => 'bca', 'BcaB07g32432' => 'bca', 'BcaB07g33362' => 'bca', 'BcaB08g36611' => 'bca', 'BcaC01g00028' => 'bca', 'BcaC01g01356' => 'bca', 'BcaC01g02034' => 'bca', 'BcaC01g06051' => 'bca', 'BcaC03g16839' => 'bca', 'BcaC03g17176' => 'bca', 'BcaC05g26829' => 'bca', 'BcaC06g31490' => 'bca', 'BcaC06g35344' => 'bca', 'BcaC06g36570' => 'bca', 'BcaC07g37537' => 'bca', 'BcaC08g43491' => 'bca', 'BcaC08g43773' => 'bca', 'BcaNung00234' => 'bca', 'BcaNung01982' => 'bca', 'BcaNung03707' => 'bca', 'BcaNung06454' => 'bca', 'BolC2t10762H' => 'bol', 'BolC2t11191H' => 'bol', 'BolC3t14322H' => 'bol', 'BolC3t19747H' => 'bol', 'BolC3t21425H' => 'bol', 'BolC4t27800H' => 'bol', 'BolC5t31423H' => 'bol', 'BolC6t35951H' => 'bol', 'BolC6t36282H' => 'bol', 'BolC7t40678H' => 'bol', 'BolC7t40679H' => 'bol', 'BolC7t42222H' => 'bol', 'BolC7t43492H' => 'bol', 'BolC7t46785H' => 'bol', 'BolC8t47853H' => 'bol', 'BolC9t56805H' => 'bol', 'BraA02t08000Z' => 'bra', 'BraA02t08341Z' => 'bra', 'BraA03t10936Z' => 'bra', 'BraA03t15657Z' => 'bra', 'BraA04t18100Z' => 'bra', 'BraA05t20523Z' => 'bra', 'BraA06t23353Z' => 'bra', 'BraA06t27473Z' => 'bra', 'BraA06t27769Z' => 'bra', 'BraA07t28928Z' => 'bra', 'BraA08t32236Z' => 'bra', 'BraA08t32841Z' => 'bra', 'BraA08t34524Z' => 'bra', 'BraA09t38742Z' => 'bra', 'BraA09t39295Z' => 'bra', 'C02p47180' => 'bna', 'C02p50990' => 'bna', 'C03p19360' => 'bna', 'C03p74950' => 'bna', 'C03p91000' => 'bna', 'C04p63260' => 'bna', 'C05p27050' => 'bna', 'C06p08750' => 'bna', 'C06p11490' => 'bna', 'C07p02820' => 'bna', 'C07p17180' => 'bna', 'C07p29440' => 'bna', 'C07p63730' => 'bna', 'C09p39260' => 'bna', 'CAN.G1164.34' => 'can', 'CAN.G1164.39' => 'can', 'CAN.G1530.3' => 'can', 'CAN.G162.61' => 'can', 'CAN.G176.6' => 'can', 'CAN.G289.49' => 'can', 'CAN.G370.21' => 'can', 'CAN.G370.22' => 'can', 'CAN.G371.117' => 'can', 'CAN.G58.37' => 'can', 'CAN.G588.98' => 'can', 'CANSAT21G2266' => 'cansat', 'CANSAT25G2799' => 'cansat', 'CANSAT35G0862' => 'cansat', 'CANSAT35G1704' => 'cansat', 'CANSAT35G1760' => 'cansat', 'CANSAT56G3971' => 'cansat', 'CANSAT56G4116' => 'cansat', 'CANSAT80G1259' => 'cansat', 'CARHR027730' => 'chi', 'CARHR033880' => 'chi', 'CARHR043270' => 'chi', 'CARHR145330' => 'chi', 'CARHR145340' => 'chi', 'CARHR175570' => 'chi', 'CARHR181570' => 'chi', 'CARHR258470' => 'chi', 'CARHR260490' => 'chi', 'CARHR294220' => 'chi', 'Carub.0001s2668' => 'cru', 'Carub.0001s3257' => 'cru', 'Carub.0001s4220' => 'cru', 'Carub.0005s0179' => 'cru', 'Carub.0006s2807' => 'cru', 'Carub.0007s0039' => 'cru', 'Carub.0008s0169' => 'cru', 'Carub.0008s0636' => 'cru', 'Ca_00338_v3' => 'car', 'Ca_00542_v3' => 'car', 'Ca_01844_v3' => 'car', 'Ca_10611_v3' => 'car', 'Ca_13326_v3' => 'car', 'Ca_17944_v3' => 'car', 'Ca_18546_v3' => 'car', 'Ca_24219_v3' => 'car', 'Ca_29972_v3' => 'car', 'CBR_g3681' => 'cbr', 'CBR_g40021' => 'cbr', 'Cc01_g08140' => 'ccan', 'Cc02_g13410' => 'ccan', 'Cc02_g37480' => 'ccan', 'Cc05_g12030' => 'ccan', 'Cc09_g03370' => 'ccan', 'Cc09_g10300' => 'ccan', 'Cc10_g03530' => 'ccan', 'Cc10_g11380' => 'ccan', 'CDE01G0176' => 'cde', 'CDE02G0675' => 'cde', 'CDE02G0942' => 'cde', 'CDE02G1153' => 'cde', 'CDE02G4177' => 'cde', 'CDE04G2117' => 'cde', 'CDE04G2736' => 'cde', 'CDE08G1161' => 'cde', 'CDE09G1238' => 'cde', 'Cfa000467' => 'cfa', 'Cfa000947' => 'cfa', 'Cfa004969' => 'cfa', 'Cfa005284' => 'cfa', 'Cfa008993' => 'cfa', 'Cfa018187' => 'cfa', 'Cfa018454' => 'cfa', 'Cfa020585' => 'cfa', 'Ciclev10000424m.g' => 'ccl', 'Ciclev10003605m.g' => 'ccl', 'Ciclev10007828m.g' => 'ccl', 'Ciclev10014620m.g' => 'ccl', 'Ciclev10015169m.g' => 'ccl', 'Ciclev10018291m.g' => 'ccl', 'Ciclev10028256m.g' => 'ccl', 'Ciclev10033822m.g' => 'ccl', 'CiPaw.05G060300' => 'cil', 'CiPaw.05G085000' => 'cil', 'CiPaw.06G083700' => 'cil', 'CiPaw.06G120300' => 'cil', 'CiPaw.09G060500' => 'cil', 'CiPaw.09G123800' => 'cil', 'CiPaw.11G169700' => 'cil', 'CiPaw.12G118300' => 'cil', 'CiPaw.15G071000' => 'cil', 'CiPaw.15G081900' => 'cil', 'ClCG01G024610' => 'cla', 'ClCG03G006070' => 'cla', 'ClCG05G019250' => 'cla', 'ClCG09G009500' => 'cla', 'ClCG11G008200' => 'cla', 'ClCG11G018080' => 'cla', 'COL.COLO4_17373' => 'col', 'COL.COLO4_22994' => 'col', 'COL.COLO4_26389' => 'col', 'COL.COLO4_27170' => 'col', 'COL.COLO4_31074' => 'col', 'COL.COLO4_31465' => 'col', 'COL.COLO4_36438' => 'col', 'COL.COLO4_36439' => 'col', 'Cpa.g.c38781' => 'cpa', 'Cpa.g.sc128.12' => 'cpa', 'Cpa.g.sc166.7' => 'cpa', 'Cpa.g.sc166.8' => 'cpa', 'Cpa.g.sc20.111' => 'cpa', 'Cpa.g.sc27.31' => 'cpa', 'Cpa.g.sc64.36' => 'cpa', 'Cpa.g.sc64.37' => 'cpa', 'Cpa.g.sc66.49' => 'cpa', 'Cpa.g.sc80.64' => 'cpa', 'CsaV3_1G012320' => 'csa', 'CsaV3_2G008480' => 'csa', 'CsaV3_2G033450' => 'csa', 'CsaV3_3G044830' => 'csa', 'CsaV3_4G033710' => 'csa', 'CsaV3_6G051730' => 'csa', 'CsaV3_7G025350' => 'csa', 'CSS0001067' => 'camsi', 'CSS0005996' => 'camsi', 'CSS0006590' => 'camsi', 'CSS0009673' => 'camsi', 'CSS0010201' => 'camsi', 'CSS0010549' => 'camsi', 'CSS0011364' => 'camsi', 'CSS0014473' => 'camsi', 'CSS0014961' => 'camsi', 'CSS0020191' => 'camsi', 'CSS0021165' => 'camsi', 'CSS0022306' => 'camsi', 'CSS0030591' => 'camsi', 'CSS0030696' => 'camsi', 'CSS0032653' => 'camsi', 'CSS0037487' => 'camsi', 'CSS0041102' => 'camsi', 'CSS0041261' => 'camsi', 'CSS0046246' => 'camsi', 'CSS0049256' => 'camsi', 'DCAR_004075' => 'dca', 'DCAR_011538' => 'dca', 'DCAR_019553' => 'dca', 'DCAR_020952' => 'dca', 'DCAR_021739' => 'dca', 'DCAR_027407' => 'dca', 'DCAR_027913' => 'dca', 'DCAR_028066' => 'dca', 'Dinv05899' => 'din', 'Dinv07563' => 'din', 'Dinv08010' => 'din', 'Dinv14125' => 'din', 'Dinv20172' => 'din', 'Dinv30743' => 'din', 'Dinv31229' => 'din', 'Dinv34162' => 'din', 'Dinv36028' => 'din', 'Dinv39368' => 'din', 'Dinv40565' => 'din', 'Dinv41706' => 'din', 'Duzib052G0089' => 'dzi', 'Duzib116G0641' => 'dzi', 'Duzib132G0069' => 'dzi', 'Duzib132G1219' => 'dzi', 'Duzib147G0278' => 'dzi', 'Duzib160G0480' => 'dzi', 'Duzib170G0661' => 'dzi', 'Duzib177G0591' => 'dzi', 'Duzib187G1353' => 'dzi', 'Duzib192G0858' => 'dzi', 'Duzib192G0883' => 'dzi', 'Duzib213G0506' => 'dzi', 'Duzib235G0289' => 'dzi', 'Duzib251G0422' => 'dzi', 'ECA232G3898' => 'eca', 'ECA233G5950' => 'eca', 'ECA234G1699' => 'eca', 'ECA234G2421' => 'eca', 'ECA236G0426' => 'eca', 'ECA236G4331' => 'eca', 'ECA248G2573' => 'eca', 'EL10Ac1g00077' => 'bvu', 'EL10Ac1g01746' => 'bvu', 'EL10Ac2g03464' => 'bvu', 'EL10Ac4g08176' => 'bvu', 'EL10Ac7g17521' => 'bvu', 'EL10Ac8g20386' => 'bvu', 'EL10Ac9g21343' => 'bvu', 'EL10Ac9g22688' => 'bvu', 'Eucgr.B03434' => 'egr', 'Eucgr.D00618' => 'egr', 'Eucgr.E02395' => 'egr', 'Eucgr.F01129' => 'egr', 'Eucgr.F02622' => 'egr', 'Eucgr.F04207' => 'egr', 'FAN01G0570' => 'fan', 'FAN03G3351' => 'fan', 'FAN06G3702' => 'fan', 'FAN07G2149' => 'fan', 'FAN10G3758' => 'fan', 'FAN11G1170' => 'fan', 'FAN11G2050' => 'fan', 'FAN11G2724' => 'fan', 'FAN12G1700' => 'fan', 'FAN12G2028' => 'fan', 'FAN15G1160' => 'fan', 'FAN15G3063' => 'fan', 'FAN16G2540' => 'fan', 'FAN16G3077' => 'fan', 'FAN16G3624' => 'fan', 'FAN17G0221' => 'fan', 'FAN20G2492' => 'fan', 'FAN20G2905' => 'fan', 'FAN21G0548' => 'fan', 'FAN21G1300' => 'fan', 'FAN22G0077' => 'fan', 'FAN22G1315' => 'fan', 'FAN24G1280' => 'fan', 'FAN24G1445' => 'fan', 'FAN24G3527' => 'fan', 'FAN25G0464' => 'fan', 'FAN25G2885' => 'fan', 'FAN25G3270' => 'fan', 'FAN27G1101' => 'fan', 'FAN27G2846' => 'fan', 'FAN27G3524' => 'fan', 'FvH4_2g11770' => 'fve', 'FvH4_2g15630' => 'fve', 'FvH4_3g05570' => 'fve', 'FvH4_3g09110' => 'fve', 'FvH4_3g19940' => 'fve', 'FvH4_4g04821' => 'fve', 'FvH4_4g31480' => 'fve', 'FvH4_7g01740' => 'fve', 'Glyma.05G130400' => 'gma', 'Glyma.05G156400' => 'gma', 'Glyma.07G197000' => 'gma', 'Glyma.08G085151' => 'gma', 'Glyma.08G114500' => 'gma', 'Glyma.08G300400' => 'gma', 'Glyma.10G215800' => 'gma', 'Glyma.12G224400' => 'gma', 'Glyma.13G179300' => 'gma', 'Glyma.13G218151' => 'gma', 'Glyma.13G238800' => 'gma', 'Glyma.13G276900' => 'gma', 'Glyma.14G078200' => 'gma', 'Glyma.15G074500' => 'gma', 'Glyma.15G094100' => 'gma', 'Glyma.17G247200' => 'gma', 'Glyma.18G120100' => 'gma', 'Glyma.20G176000' => 'gma', 'Gohir.A01G063600' => 'ghi', 'Gohir.A01G170301' => 'ghi', 'Gohir.A02G060500' => 'ghi', 'Gohir.A05G133850' => 'ghi', 'Gohir.A05G161400' => 'ghi', 'Gohir.A06G012900' => 'ghi', 'Gohir.A06G035901' => 'ghi', 'Gohir.A06G127100' => 'ghi', 'Gohir.A06G210500' => 'ghi', 'Gohir.A08G008650' => 'ghi', 'Gohir.A09G072700' => 'ghi', 'Gohir.A09G088301' => 'ghi', 'Gohir.A10G040600' => 'ghi', 'Gohir.A12G036300' => 'ghi', 'Gohir.A12G143350' => 'ghi', 'Gohir.A12G165500' => 'ghi', 'Gohir.A13G145700' => 'ghi', 'Gohir.D01G050000' => 'ghi', 'Gohir.D01G051366' => 'ghi', 'Gohir.D01G161350' => 'ghi', 'Gohir.D02G065900' => 'ghi', 'Gohir.D05G164200' => 'ghi', 'Gohir.D05G355500' => 'ghi', 'Gohir.D06G010400' => 'ghi', 'Gohir.D06G111250' => 'ghi', 'Gohir.D06G132000' => 'ghi', 'Gohir.D06G210500' => 'ghi', 'Gohir.D07G165675' => 'ghi', 'Gohir.D08G062240' => 'ghi', 'Gohir.D08G086101' => 'ghi', 'Gohir.D08G138060' => 'ghi', 'Gohir.D09G072300' => 'ghi', 'Gohir.D10G041400' => 'ghi', 'Gohir.D11G191020' => 'ghi', 'Gohir.D11G212066' => 'ghi', 'Gohir.D12G036300' => 'ghi', 'Gohir.D12G168600' => 'ghi', 'Gohir.D13G150600' => 'ghi', 'Gorai.001G057300' => 'gra', 'Gorai.002G069900' => 'gra', 'Gorai.002G200000' => 'gra', 'Gorai.003G067600' => 'gra', 'Gorai.005G074800' => 'gra', 'Gorai.006G087300' => 'gra', 'Gorai.008G037500' => 'gra', 'Gorai.008G181400' => 'gra', 'Gorai.009G169400' => 'gra', 'Gorai.009G387900' => 'gra', 'Gorai.010G013300' => 'gra', 'Gorai.010G153800' => 'gra', 'Gorai.010G255800' => 'gra', 'Gorai.011G043700' => 'gra', 'Gorai.011G198900' => 'gra', 'Gorai.013G168400' => 'gra', 'GSVIVG01005212001' => 'vvi', 'GSVIVG01006163001' => 'vvi', 'GSVIVG01009625001' => 'vvi', 'GSVIVG01014338001' => 'vvi', 'GSVIVG01020005001' => 'vvi', 'GSVIVG01021450001' => 'vvi', 'GSVIVG01023975001' => 'vvi', 'GSVIVG01034490001' => 'vvi', 'HanXRQChr04g0112071' => 'han', 'HanXRQChr05g0131151' => 'han', 'HanXRQChr09g0262371' => 'han', 'HanXRQChr09g0268401' => 'han', 'HanXRQChr10g0279241' => 'han', 'HanXRQChr10g0297961' => 'han', 'HanXRQChr11g0326231' => 'han', 'HanXRQChr11g0328471' => 'han', 'HanXRQChr16g0507941' => 'han', 'HanXRQChr17g0560211' => 'han', 'Haze_02108' => 'cav', 'Haze_02428' => 'cav', 'Haze_05593' => 'cav', 'Haze_06448' => 'cav', 'Haze_09427' => 'cav', 'Haze_12022' => 'cav', 'Haze_17612' => 'cav', 'Haze_17928' => 'cav', 'Hma1.2p1_0032F.1_g019250' => 'hma', 'Hma1.2p1_0163F.1_g072690' => 'hma', 'Hma1.2p1_0265F.1_g106710' => 'hma', 'Hma1.2p1_0286F.1_g113970' => 'hma', 'Hma1.2p1_0363F.1_g136640' => 'hma', 'Hma1.2p1_0584F.1_g183470' => 'hma', 'Hma1.2p1_0885F.1_g232570' => 'hma', 'HPP92_006022' => 'vpl', 'HPP92_007320' => 'vpl', 'HPP92_011521' => 'vpl', 'HPP92_019387' => 'vpl', 'HPP92_024038' => 'vpl', 'Hund05891' => 'sun', 'Hund06450' => 'sun', 'Hund12053' => 'sun', 'Hund16800' => 'sun', 'Hund21222' => 'sun', 'Hund22896' => 'sun', 'Hund23746' => 'sun', 'Hund27083' => 'sun', 'Lalb_Chr02g0141831' => 'lal', 'Lalb_Chr02g0141841' => 'lal', 'Lalb_Chr05g0220411' => 'lal', 'Lalb_Chr06g0162081' => 'lal', 'Lalb_Chr09g0327651' => 'lal', 'Lalb_Chr13g0295051' => 'lal', 'Lalb_Chr15g0086801' => 'lal', 'Lalb_Chr16g0383781' => 'lal', 'Lalb_Chr16g0383791' => 'lal', 'Lalb_Chr18g0055441' => 'lal', 'Lalb_Chr18g0059611' => 'lal', 'Lalb_Chr20g0109661' => 'lal', 'Lalb_Chr20g0109831' => 'lal', 'Lalb_Chr20g0121871' => 'lal', 'Lalb_Chr22g0355361' => 'lal', 'Lalb_Chr25g0286371' => 'lal', 'Lj1A1187G43' => 'lonja', 'Lj1A1205T50' => 'lonja', 'Lj1A800G33' => 'lonja', 'Lj1C1187T7' => 'lonja', 'Lj1C843T11' => 'lonja', 'Lj1g0010940' => 'lja', 'Lj2A288T69' => 'lonja', 'Lj3g0024276' => 'lja', 'Lj4A47T76' => 'lonja', 'Lj4g0005805' => 'lja', 'Lj4g0006097' => 'lja', 'Lj4g0008528' => 'lja', 'Lj4g0024907' => 'lja', 'Lj5g0012472' => 'lja', 'Lj5g0018648' => 'lja', 'Lj6C789G1' => 'lonja', 'Lj6g0004000' => 'lja', 'Lj7A292G67' => 'lonja', 'Lj7A292T64' => 'lonja', 'Lj9A400T58' => 'lonja', 'Lsat_1_v5_gn_1_126181' => 'lsa', 'Lsat_1_v5_gn_4_123041' => 'lsa', 'Lsat_1_v5_gn_4_133620' => 'lsa', 'Lsat_1_v5_gn_4_53221' => 'lsa', 'Lsat_1_v5_gn_4_71961' => 'lsa', 'Lsat_1_v5_gn_7_105241' => 'lsa', 'Lsat_1_v5_gn_7_21361' => 'lsa', 'Lsat_1_v5_gn_7_28860' => 'lsa', 'Lsat_1_v5_gn_7_31260' => 'lsa', 'Lsat_1_v5_gn_8_52801' => 'lsa', 'Manes.02G191400' => 'mes', 'Manes.03G110100' => 'mes', 'Manes.04G071100' => 'mes', 'Manes.05G100500' => 'mes', 'Manes.05G164700' => 'mes', 'Manes.15G087000' => 'mes', 'Manes.15G121500' => 'mes', 'Manes.16G028300' => 'mes', 'Manes.17G046100' => 'mes', 'Manes.17G069800' => 'mes', 'Manes.18G100500' => 'mes', 'Mapoly0002s0109' => 'mpo', 'Mapoly0024s0007' => 'mpo', 'Mapoly0089s0032' => 'mpo', 'MBI04_g42241_MAGBIO' => 'mbi', 'MBI05_g11988_MAGBIO' => 'mbi', 'MBI05_g35452_MAGBIO' => 'mbi', 'MBI07_g30179_MAGBIO' => 'mbi', 'MBI07_g35859_MAGBIO' => 'mbi', 'MBI07_g35860_MAGBIO' => 'mbi', 'MBI07_g37166_MAGBIO' => 'mbi', 'MBI08_g18172_MAGBIO' => 'mbi', 'MBI09_g08441_MAGBIO' => 'mbi', 'MBI13_g01676_MAGBIO' => 'mbi', 'MBI14_g42955_MAGBIO' => 'mbi', 'MBI16_g13161_MAGBIO' => 'mbi', 'MBI17_g27204_MAGBIO' => 'mbi', 'MBI19_g21595_MAGBIO' => 'mbi', 'MD00G1148400' => 'mdo', 'MD02G1301200' => 'mdo', 'MD03G1227800' => 'mdo', 'MD05G1041100' => 'mdo', 'MD05G1124800' => 'mdo', 'MD05G1284000' => 'mdo', 'MD05G1338800' => 'mdo', 'MD05G1338900' => 'mdo', 'MD07G1022800' => 'mdo', 'MD10G1047500' => 'mdo', 'MD10G1127500' => 'mdo', 'MD10G1262300' => 'mdo', 'MD10G1293800' => 'mdo', 'MD16G1074300' => 'mdo', 'Medtr1g021670' => 'mtr', 'Medtr1g096320' => 'mtr', 'Medtr2g013690' => 'mtr', 'Medtr2g019450' => 'mtr', 'Medtr2g085170' => 'mtr', 'Medtr4g088785' => 'mtr', 'Medtr8g055930' => 'mtr', 'Medtr8g085850' => 'mtr', 'MELO3C002605.2' => 'cme', 'MELO3C003891.2' => 'cme', 'MELO3C004012.2' => 'cme', 'MELO3C007134.2' => 'cme', 'MELO3C008118.2' => 'cme', 'MELO3C016700.2' => 'cme', 'MELO3C024127.2' => 'cme', 'MELO3C033361.2' => 'cme', 'MELO3C033362.2' => 'cme', 'Migut.C00430' => 'egut', 'Migut.C01246' => 'egut', 'Migut.E00101' => 'egut', 'Migut.H01486' => 'egut', 'Migut.H01939' => 'egut', 'Migut.K00360' => 'egut', 'Migut.M00910' => 'egut', 'Migut.M01139' => 'egut', 'Migut.N02677' => 'egut', 'MSTRG.13252' => 'ama', 'MSTRG.14701' => 'ama', 'MSTRG.1521' => 'ama', 'MSTRG.15884' => 'ama', 'MSTRG.16242' => 'ama', 'MSTRG.22285' => 'ama', 'MSTRG.22444' => 'ama', 'MSTRG.2349' => 'ama', 'MSTRG.26308' => 'ama', 'MSTRG.28296' => 'ama', 'MSTRG.9895' => 'ama', 'Nitab4.5_0000110g0060' => 'nta', 'Nitab4.5_0000420g0130' => 'nta', 'Nitab4.5_0000422g0030' => 'nta', 'Nitab4.5_0000560g0180' => 'nta', 'Nitab4.5_0000703g0100' => 'nta', 'Nitab4.5_0000786g0200' => 'nta', 'Nitab4.5_0001336g0020' => 'nta', 'Nitab4.5_0001796g0030' => 'nta', 'Nitab4.5_0003348g0060' => 'nta', 'Nitab4.5_0003698g0040' => 'nta', 'Nitab4.5_0003942g0090' => 'nta', 'Nitab4.5_0004775g0070' => 'nta', 'Nitab4.5_0004864g0030' => 'nta', 'Nitab4.5_0005615g0020' => 'nta', 'Nitab4.5_0009288g0030' => 'nta', 'Nitab4.5_0009341g0010' => 'nta', 'Nitab4.5_0009535g0010' => 'nta', 'Nn1g03995' => 'nnu', 'Nn1g04100' => 'nnu', 'Nn1g06530' => 'nnu', 'Nn3g16404' => 'nnu', 'Nn3g17212' => 'nnu', 'Nn3g20776' => 'nnu', 'Nn3g21923' => 'nnu', 'Nn5g27737' => 'nnu', 'Nn5g29461' => 'nnu', 'Nn7g38355' => 'nnu', 'Nn8g39873' => 'nnu', 'Oeu000548.2' => 'oeu', 'Oeu004672.1' => 'oeu', 'Oeu015605.2' => 'oeu', 'Oeu016092.1' => 'oeu', 'Oeu017879.3' => 'oeu', 'Oeu024910.1' => 'oeu', 'Oeu028965.1' => 'oeu', 'Oeu031269.1' => 'oeu', 'Oeu031270.1' => 'oeu', 'Oeu032535.1' => 'oeu', 'Oeu034151.1' => 'oeu', 'Oeu034152.1' => 'oeu', 'Oeu034588.2' => 'oeu', 'Oeu050846.1' => 'oeu', 'Oeu050849.2' => 'oeu', 'Oeu051063.2' => 'oeu', 'Oeu052368.1' => 'oeu', 'Oeu052370.1' => 'oeu', 'Os01g0210400' => 'osa', 'Os01g0304300' => 'osa', 'Os01g0749100' => 'osa', 'Os02g0745800' => 'osa', 'Os03g0769050' => 'osa', 'Os05g0531500' => 'osa', 'Os06g0724300' => 'osa', 'Os11g0198100' => 'osa', 'Peaxi162Scf00069g01425' => 'pax', 'Peaxi162Scf00280g00811' => 'pax', 'Peaxi162Scf00310g00615' => 'pax', 'Peaxi162Scf00362g00542' => 'pax', 'Peaxi162Scf00461g00310' => 'pax', 'Peaxi162Scf00530g00118' => 'pax', 'Peaxi162Scf00541g00057' => 'pax', 'Peaxi162Scf00661g00017' => 'pax', 'Peaxi162Scf00926g00027' => 'pax', 'Peaxi162Scf01064g00263' => 'pax', 'Peaxi162Scf01211g00135' => 'pax', 'PGR004G2336' => 'pgr', 'PGR042G0327' => 'pgr', 'PGR042G1957' => 'pgr', 'PGR042G2003' => 'pgr', 'PGR042G3929' => 'pgr', 'PGR083G1137' => 'pgr', 'PGR083G1364' => 'pgr', 'PGSC0003DMG400003381' => 'stu', 'PGSC0003DMG400003417' => 'stu', 'PGSC0003DMG400008981' => 'stu', 'PGSC0003DMG400012417' => 'stu', 'PGSC0003DMG400012823' => 'stu', 'PGSC0003DMG400016885' => 'stu', 'PGSC0003DMG400022812' => 'stu', 'PGSC0003DMG400029726' => 'stu', 'PGSC0003DMG401009243' => 'stu', 'PGSC0003DMG401031505' => 'stu', 'PGSC0003DMG402031505' => 'stu', 'Phvul.001G017600' => 'pvu', 'Phvul.002G193500' => 'pvu', 'Phvul.002G228900' => 'pvu', 'Phvul.002G236800' => 'pvu', 'Phvul.003G049500' => 'pvu', 'Phvul.005G072000' => 'pvu', 'Phvul.006G164800' => 'pvu', 'Phvul.006G185100' => 'pvu', 'Phvul.007G090000' => 'pvu', 'Potri.001G399800' => 'ptr', 'Potri.002G149900' => 'ptr', 'Potri.004G044100' => 'ptr', 'Potri.004G177600' => 'ptr', 'Potri.009G138000' => 'ptr', 'Potri.010G094000' => 'ptr', 'Potri.011G053000' => 'ptr', 'Potri.011G119300' => 'ptr', 'Potri.013G113700' => 'ptr', 'Potri.018G107800' => 'ptr', 'Potri.019G084100' => 'ptr', 'Pp3c14_23720' => 'ppa', 'Pp3c16_6340' => 'ppa', 'Pp3c23_13420' => 'ppa', 'Pp3c24_2740' => 'ppa', 'Pp3c25_860' => 'ppa', 'Pp3c8_21750' => 'ppa', 'Prupe.1G273000' => 'ppe', 'Prupe.1G273700' => 'ppe', 'Prupe.1G274100' => 'ppe', 'Prupe.2G023300' => 'ppe', 'Prupe.4G048000' => 'ppe', 'Prupe.4G080400' => 'ppe', 'Prupe.4G181200' => 'ppe', 'Prupe.8G056900' => 'ppe', 'Prupe.8G168700' => 'ppe', 'Psat1g189080' => 'psa', 'Psat1g204760' => 'psa', 'Psat4g175560' => 'psa', 'Psat4g177720' => 'psa', 'Psat5g244240' => 'psa', 'Psat6g010720' => 'psa', 'Psat6g187200' => 'psa', 'Psat7g072040' => 'psa', 'PSO017G3501' => 'pso', 'PSO063G2148' => 'pso', 'PSO063G5608' => 'pso', 'PSO210G6392' => 'pso', 'PSO541G2319' => 'pso', 'PSO541G2836' => 'pso', 'PSO541G4012' => 'pso', 'PSO541G6253' => 'pso', 'PSO675G0580' => 'pso', 'PSO675G0856' => 'pso', 'PSO675G5635' => 'pso', 'PSO675G9157' => 'pso', 'PSO832G1660' => 'pso', 'PSO832G1969' => 'pso', 'QL02p007186' => 'qlo', 'QL02p033904' => 'qlo', 'QL03p064391' => 'qlo', 'QL05p040593' => 'qlo', 'QL05p058242' => 'qlo', 'QL08p021825' => 'qlo', 'QL11p004981' => 'qlo', 'RcHm_v2.0_Chr1g0318301' => 'rch', 'RcHm_v2.0_Chr4g0418501' => 'rch', 'RcHm_v2.0_Chr4g0439971' => 'rch', 'RcHm_v2.0_Chr5g0008541' => 'rch', 'RcHm_v2.0_Chr5g0014101' => 'rch', 'RcHm_v2.0_Chr5g0014131' => 'rch', 'RcHm_v2.0_Chr5g0033621' => 'rch', 'RcHm_v2.0_Chr6g0272041' => 'rch', 'RcHm_v2.0_Chr6g0278831' => 'rch', 'Rhsim02G0130400' => 'rsi', 'Rhsim02G0171100' => 'rsi', 'Rhsim05G0053000' => 'rsi', 'Rhsim05G0053100' => 'rsi', 'Rhsim06G0096500' => 'rsi', 'Rhsim06G0096600' => 'rsi', 'Rhsim06G0199100' => 'rsi', 'Rhsim12G0062300' => 'rsi', 'Rhsim12G0062800' => 'rsi', 'Sabra02G0118600' => 'sbr', 'Sabra04G0027300' => 'sbr', 'Sabra04G0119500' => 'sbr', 'Sabra08G0112500' => 'sbr', 'Sabra11G0036800' => 'sbr', 'Sabra11G0103800' => 'sbr', 'Sabra13G0096300' => 'sbr', 'Sabra16G0262300' => 'sbr', 'Sabra18G0091700' => 'sbr', 'Sabra19G0095400' => 'sbr', 'SalBow6G3080' => 'sbo', 'SalBow7G1157' => 'sbo', 'SalBow7G2123' => 'sbo', 'SalBow7G2285' => 'sbo', 'SalBow7G3537' => 'sbo', 'SalBow8G2947' => 'sbo', 'SalBow8G4463' => 'sbo', 'SalBow8G5466' => 'sbo', 'Sc01g0001750' => 'sci', 'Sc02g0006640' => 'sci', 'Sc02g0006670' => 'sci', 'Sc04g0008220' => 'sci', 'Sc05g0006190' => 'sci', 'Sc08g0002760' => 'sci', 'Sc17g0006170' => 'sci', 'Sc22g0002050' => 'sci', 'Sc23g0001190' => 'sci', 'Sc24g0000980' => 'sci', 'Sed0006245' => 'sed', 'Sed0007543' => 'sed', 'Sed0009411' => 'sed', 'Sed0010765' => 'sed', 'Sed0012944' => 'sed', 'Sed0014682' => 'sed', 'Sed0016174' => 'sed', 'Sed0016796' => 'sed', 'Sed0020317' => 'sed', 'Sed0021467' => 'sed', 'SEGI_01316' => 'sgi', 'SEGI_03374' => 'sgi', 'SEGI_16265' => 'sgi', 'SEGI_18569' => 'sgi', 'SEGI_20351' => 'sgi', 'SEGI_26395' => 'sgi', 'SEGI_29469' => 'sgi', 'SEGI_34771' => 'sgi', 'SEGI_36769' => 'sgi', 'SEGI_37139' => 'sgi', 'SGA_v2.0_scaffold100G29687' => 'sas', 'SGA_v2.0_scaffold118G32472' => 'sas', 'SGA_v2.0_scaffold14G07051' => 'sas', 'SGA_v2.0_scaffold183G39845' => 'sas', 'SGA_v2.0_scaffold1G00174' => 'sas', 'SGA_v2.0_scaffold22G09714' => 'sas', 'SGA_v2.0_scaffold333G48992' => 'sas', 'SGA_v2.0_scaffold46G17491' => 'sas', 'SGA_v2.0_scaffold49G18294' => 'sas', 'SGA_v2.0_scaffold63G21658' => 'sas', 'SHI01741' => 'shi', 'SHI05771' => 'shi', 'SHI18077' => 'shi', 'SHI20525' => 'shi', 'SHI20527' => 'shi', 'SHI20528' => 'shi', 'SMO172G0185' => 'smo', 'SMO198G0020' => 'smo', 'SMO351G0006' => 'smo', 'SMO356G0118' => 'smo', 'SMO358G0296' => 'smo', 'SMO367G0079' => 'smo', 'SMO367G1277' => 'smo', 'Solyc01g014220.3' => 'sly', 'Solyc01g111770.2' => 'sly', 'Solyc02g078180.3' => 'sly', 'Solyc03g006430.3' => 'sly', 'Solyc03g006456.1' => 'sly', 'Solyc03g079860.2' => 'sly', 'Solyc04g079770.3' => 'sly', 'Solyc05g007430.4' => 'sly', 'Solyc07g063150.3' => 'sly', 'Solyc08g016620.3' => 'sly', 'Solyc09g057590.3' => 'sly', 'Solyc09g057600.1' => 'sly', 'Solyc10g009050.3' => 'sly', 'Solyc11g017420.2' => 'sly', 'Sopen01g053810' => 'spe', 'Sopen02g023040' => 'spe', 'Sopen03g002440' => 'spe', 'Sopen04g033350' => 'spe', 'Sopen05g003310' => 'spe', 'Sopen07g004050' => 'spe', 'Sopen07g031340' => 'spe', 'Sopen08g006990' => 'spe', 'Sopen10g004830' => 'spe', 'Sopen11g009370' => 'spe', 'Sp1g24450' => 'spa', 'Sp1g29670' => 'spa', 'Sp1g39600' => 'spa', 'Sp2g11080' => 'spa', 'Sp2g13970' => 'spa', 'Sp4g16130' => 'spa', 'Sp6g13080' => 'spa', 'Sp7g37270' => 'spa', 'TAR371G0065' => 'tar', 'TAR376G0340' => 'tar', 'TAR376G0435' => 'tar', 'TAR381G0002' => 'tar', 'TAR381G1236' => 'tar', 'TAR624G0055' => 'tar', 'TAR624G0324' => 'tar', 'TAR624G0696' => 'tar', 'TAR624G0906' => 'tar', 'TAR625G0107' => 'tar', 'TAR626G0015' => 'tar', 'TAR626G1356' => 'tar', 'TAR627G0888' => 'tar', 'TAR628G0399' => 'tar', 'TAR628G1327' => 'tar', 'TAR629G2831' => 'tar', 'TAR629G2874' => 'tar', 'TAR633G1432' => 'tar', 'TAR633G2771' => 'tar', 'THA.LOC104803394' => 'tha', 'THA.LOC104805153' => 'tha', 'THA.LOC104806784' => 'tha', 'THA.LOC104810473' => 'tha', 'THA.LOC104813100' => 'tha', 'THA.LOC104814215' => 'tha', 'THA.LOC104815554' => 'tha', 'THA.LOC104820544' => 'tha', 'THA.LOC104824754' => 'tha', 'THA.LOC104827717' => 'tha', 'Thecc.02G031400' => 'tca', 'Thecc.02G055900' => 'tca', 'Thecc.02G350800' => 'tca', 'Thecc.06G150900' => 'tca', 'Thecc.06G186600' => 'tca', 'Thecc.07G089600' => 'tca', 'Thecc.08G020400' => 'tca', 'Thecc.08G182100' => 'tca', 'Thhalv10000873m.g' => 'esa', 'Thhalv10004185m.g' => 'esa', 'Thhalv10006981m.g' => 'esa', 'Thhalv10007204m.g' => 'esa', 'Thhalv10011374m.g' => 'esa', 'Thhalv10013482m.g' => 'esa', 'Thhalv10017801m.g' => 'esa', 'Thhalv10024983m.g' => 'esa', 'TPR.G12072' => 'tpr', 'TPR.G15769' => 'tpr', 'TPR.G16504' => 'tpr', 'TPR.G16506' => 'tpr', 'TPR.G24345' => 'tpr', 'TPR.G26666' => 'tpr', 'TPR.G27320' => 'tpr', 'TPR.G31819' => 'tpr', 'TPR.G38879' => 'tpr', 'TPR.G39015' => 'tpr', 'TPR.G8819' => 'tpr', 'TWI09G0924' => 'twi', 'TWI12G0811' => 'twi', 'TWI12G1294' => 'twi', 'TWI31G0150' => 'twi', 'TWI36G1262' => 'twi', 'TWI38G1287' => 'twi', 'TWI38G1633' => 'twi', 'TWI38G1982' => 'twi', 'TWI39G0116' => 'twi', 'TWI60G1011' => 'twi', 'TWI63G0171' => 'twi', 'TWI73G0839' => 'twi', 'TWI79G1511' => 'twi', 'unitig_0.g915' => 'ugi', 'unitig_0.g916' => 'ugi', 'unitig_21.g20219' => 'ugi', 'unitig_21.g20416' => 'ugi', 'unitig_578.g16132' => 'ugi', 'unitig_578.g16718' => 'ugi', 'unitig_62.g23481' => 'ugi', 'unitig_744.g24535' => 'ugi', 'unitig_749.g13525' => 'ugi', 'vmacro01248' => 'vma', 'vmacro02290' => 'vma', 'vmacro10946' => 'vma', 'vmacro11865' => 'vma', 'vmacro12493' => 'vma', 'vmacro17322' => 'vma', 'vmacro21599' => 'vma', 'vmacro23041' => 'vma', 'VMungo0251G0004' => 'vmu', 'VMungo0251G2639' => 'vmu', 'VMungo0251G2967' => 'vmu', 'VMungo0540G0864' => 'vmu', 'VMungo0540G1569' => 'vmu', 'VMungo0647G0317' => 'vmu', 'VMungo0720G1373' => 'vmu', 'VMungo0720G1508' => 'vmu', 'VMungo1080G0485' => 'vmu', 'VMungo1215G3177' => 'vmu', 'Zm00001eb112600' => 'zma', 'Zm00001eb120220' => 'zma', 'Zm00001eb153240' => 'zma', 'Zm00001eb168880' => 'zma', 'Zm00001eb213920' => 'zma', 'Zm00001eb228280' => 'zma', 'Zm00001eb254580' => 'zma', 'Zm00001eb272180' => 'zma', 'Zm00001eb293190' => 'zma', 'Zm00001eb322930' => 'zma', 'Zm00001eb353360' => 'zma', 'Zm00001eb353390' => 'zma', 'Zm00001eb353430' => 'zma', 'Zm00001eb353440' => 'zma', 'Zm00001eb353780' => 'zma' ), 'gf_id' => 'HOM05D000499', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000499' ), 'data_identifier' => 'HOM05D000499', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000499', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1066', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p29780' => 'bna', 'A02p33180' => 'bna', 'A03p16470' => 'bna', 'A03p66010' => 'bna', 'A04p25970' => 'bna', 'A06p01270' => 'bna', 'A06p46080' => 'bna', 'A07p11400' => 'bna', 'A08p01840' => 'bna', 'A08p08230' => 'bna', 'A08p25740' => 'bna', 'A09p32070' => 'bna', 'A09p37830' => 'bna', 'A09p42840' => 'bna', 'A09p42850' => 'bna', 'Aa31LG10G2060' => 'aar', 'Aa31LG2G7410' => 'aar', 'Aa31LG6G10200' => 'aar', 'Aa31LG6G16680' => 'aar', 'Aa31LG6G8470' => 'aar', 'Aa31LG9G12730' => 'aar', 'Aa31LG9G13680' => 'aar', 'Aa31LG9G14920' => 'aar', 'Aa31LG9G6650' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4977' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5467' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3254' => 'aag', 'Actinidia02578' => 'ach', 'Actinidia07693' => 'ach', 'Actinidia08413' => 'ach', 'Actinidia08414' => 'ach', 'Actinidia15289' => 'ach', 'Actinidia19871' => 'ach', 'Actinidia21475' => 'ach', 'Actinidia22576' => 'ach', 'Actinidia28327' => 'ach', 'Actinidia32491' => 'ach', 'Actinidia39463' => 'ach', 'Actinidia39571' => 'ach', 'Ah.01g013750' => 'amhyb', 'Ah.01g023210' => 'amhyb', 'Ah.04g164850' => 'amhyb', 'Ah.05g178060' => 'amhyb', 'Ah.07g204270' => 'amhyb', 'Ah.07g208480' => 'amhyb', 'Ah.09g237410' => 'amhyb', 'Ah.14g089460' => 'amhyb', 'AL1G41790' => 'aly', 'AL1G49050' => 'aly', 'AL1G53810' => 'aly', 'AL1G61400' => 'aly', 'AL4G18580' => 'aly', 'AL5G12510' => 'aly', 'AL5G12540' => 'aly', 'AL6G43230' => 'aly', 'AL7G10370' => 'aly', 'AL7G19250' => 'aly', 'AL8G12240' => 'aly', 'AL8G18540' => 'aly', 'Aqoxy1G02409' => 'aox', 'Aqoxy2G03993' => 'aox', 'Aqoxy3G03357' => 'aox', 'Aqoxy4G00785' => 'aox', 'Aqoxy5G02598' => 'aox', 'Aqoxy6G00132' => 'aox', 'Aqoxy7G01776' => 'aox', 'Aqoxy7G02316' => 'aox', 'Aqoxy7G03973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.12AFKW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B8730' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27IQR1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3F75VG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3RE0GA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41TCQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.527VTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FIR39' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5W8UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DA38EV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ63HS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H1I32C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HC27T5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4M8AP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7N3CZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9UVDZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LS1NQA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT1D4B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SKC4TM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCFV76' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF9Q1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQWD9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1ZM88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WE07RT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YCK7VH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJE6Q6' => 'arhy', 'AT1G28240' => 'ath', 'AT1G34550' => 'ath', 'AT1G53040' => 'ath', 'AT2G02910' => 'ath', 'AT4G09630' => 'ath', 'AT4G38500' => 'ath', 'AT5G42660' => 'ath', 'AT5G46220' => 'ath', 'ATR0152G026' => 'atr', 'ATR0564G343' => 'atr', 'ATR0706G151' => 'atr', 'ATR0733G207' => 'atr', 'ATR0751G234' => 'atr', 'ATR0807G048' => 'atr', 'ATR1091G084' => 'atr', 'Atru.chr10.1229' => 'acertr', 'Atru.chr10.1230' => 'acertr', 'Atru.chr10.1874' => 'acertr', 'Atru.chr11.1808' => 'acertr', 'Atru.chr13.1795' => 'acertr', 'Atru.chr13.570' => 'acertr', 'Atru.chr2.2608' => 'acertr', 'Atru.chr2.2609' => 'acertr', 'Atru.chr5.3428' => 'acertr', 'Atru.chr8.1171' => 'acertr', 'AUR62004651' => 'cqu', 'AUR62008675' => 'cqu', 'AUR62010014' => 'cqu', 'AUR62013004' => 'cqu', 'AUR62014825' => 'cqu', 'AUR62015015' => 'cqu', 'AUR62015151' => 'cqu', 'AUR62017020' => 'cqu', 'AUR62019422' => 'cqu', 'AUR62023570' => 'cqu', 'AUR62025571' => 'cqu', 'AUR62029098' => 'cqu', 'AUR62033863' => 'cqu', 'AUR62034296' => 'cqu', 'AUR62040075' => 'cqu', 'BcaB02g07334' => 'bca', 'BcaB02g10575' => 'bca', 'BcaB03g12119' => 'bca', 'BcaB03g12120' => 'bca', 'BcaB03g13945' => 'bca', 'BcaB04g17123' => 'bca', 'BcaB04g17867' => 'bca', 'BcaB04g19839' => 'bca', 'BcaB07g30317' => 'bca', 'BcaB07g32432' => 'bca', 'BcaB07g33362' => 'bca', 'BcaB08g36611' => 'bca', 'BcaC01g00028' => 'bca', 'BcaC01g01356' => 'bca', 'BcaC01g02034' => 'bca', 'BcaC01g06051' => 'bca', 'BcaC03g16839' => 'bca', 'BcaC03g17176' => 'bca', 'BcaC05g26829' => 'bca', 'BcaC06g31490' => 'bca', 'BcaC06g35344' => 'bca', 'BcaC06g36570' => 'bca', 'BcaC07g37537' => 'bca', 'BcaC08g43491' => 'bca', 'BcaC08g43773' => 'bca', 'BcaNung00234' => 'bca', 'BcaNung01982' => 'bca', 'BcaNung03707' => 'bca', 'BcaNung06454' => 'bca', 'BolC2t10762H' => 'bol', 'BolC2t11191H' => 'bol', 'BolC3t14322H' => 'bol', 'BolC3t19747H' => 'bol', 'BolC3t21425H' => 'bol', 'BolC4t27800H' => 'bol', 'BolC5t31423H' => 'bol', 'BolC6t35951H' => 'bol', 'BolC6t36282H' => 'bol', 'BolC7t40678H' => 'bol', 'BolC7t40679H' => 'bol', 'BolC7t42222H' => 'bol', 'BolC7t43492H' => 'bol', 'BolC7t46785H' => 'bol', 'BolC8t47853H' => 'bol', 'BolC9t56805H' => 'bol', 'BraA02t08000Z' => 'bra', 'BraA02t08341Z' => 'bra', 'BraA03t10936Z' => 'bra', 'BraA03t15657Z' => 'bra', 'BraA04t18100Z' => 'bra', 'BraA05t20523Z' => 'bra', 'BraA06t23353Z' => 'bra', 'BraA06t27473Z' => 'bra', 'BraA06t27769Z' => 'bra', 'BraA07t28928Z' => 'bra', 'BraA08t32236Z' => 'bra', 'BraA08t32841Z' => 'bra', 'BraA08t34524Z' => 'bra', 'BraA09t38742Z' => 'bra', 'BraA09t39295Z' => 'bra', 'C02p47180' => 'bna', 'C02p50990' => 'bna', 'C03p19360' => 'bna', 'C03p74950' => 'bna', 'C03p91000' => 'bna', 'C04p63260' => 'bna', 'C05p27050' => 'bna', 'C06p08750' => 'bna', 'C06p11490' => 'bna', 'C07p02820' => 'bna', 'C07p17180' => 'bna', 'C07p29440' => 'bna', 'C07p63730' => 'bna', 'C09p39260' => 'bna', 'CAN.G1164.34' => 'can', 'CAN.G1164.39' => 'can', 'CAN.G1530.3' => 'can', 'CAN.G162.61' => 'can', 'CAN.G176.6' => 'can', 'CAN.G289.49' => 'can', 'CAN.G370.21' => 'can', 'CAN.G370.22' => 'can', 'CAN.G371.117' => 'can', 'CAN.G58.37' => 'can', 'CAN.G588.98' => 'can', 'CANSAT21G2266' => 'cansat', 'CANSAT25G2799' => 'cansat', 'CANSAT35G0862' => 'cansat', 'CANSAT35G1704' => 'cansat', 'CANSAT35G1760' => 'cansat', 'CANSAT56G3971' => 'cansat', 'CANSAT56G4116' => 'cansat', 'CANSAT80G1259' => 'cansat', 'CARHR027730' => 'chi', 'CARHR033880' => 'chi', 'CARHR043270' => 'chi', 'CARHR145330' => 'chi', 'CARHR145340' => 'chi', 'CARHR175570' => 'chi', 'CARHR181570' => 'chi', 'CARHR258470' => 'chi', 'CARHR260490' => 'chi', 'CARHR294220' => 'chi', 'Carub.0001s2668' => 'cru', 'Carub.0001s3257' => 'cru', 'Carub.0001s4220' => 'cru', 'Carub.0005s0179' => 'cru', 'Carub.0006s2807' => 'cru', 'Carub.0007s0039' => 'cru', 'Carub.0008s0169' => 'cru', 'Carub.0008s0636' => 'cru', 'Ca_00338_v3' => 'car', 'Ca_00542_v3' => 'car', 'Ca_01844_v3' => 'car', 'Ca_10611_v3' => 'car', 'Ca_13326_v3' => 'car', 'Ca_17944_v3' => 'car', 'Ca_18546_v3' => 'car', 'Ca_24219_v3' => 'car', 'Ca_29972_v3' => 'car', 'CBR_g3681' => 'cbr', 'CBR_g40021' => 'cbr', 'Cc01_g08140' => 'ccan', 'Cc02_g13410' => 'ccan', 'Cc02_g37480' => 'ccan', 'Cc05_g12030' => 'ccan', 'Cc09_g03370' => 'ccan', 'Cc09_g10300' => 'ccan', 'Cc10_g03530' => 'ccan', 'Cc10_g11380' => 'ccan', 'CDE01G0176' => 'cde', 'CDE02G0675' => 'cde', 'CDE02G0942' => 'cde', 'CDE02G1153' => 'cde', 'CDE02G4177' => 'cde', 'CDE04G2117' => 'cde', 'CDE04G2736' => 'cde', 'CDE08G1161' => 'cde', 'CDE09G1238' => 'cde', 'Cfa000467' => 'cfa', 'Cfa000947' => 'cfa', 'Cfa004969' => 'cfa', 'Cfa005284' => 'cfa', 'Cfa008993' => 'cfa', 'Cfa018187' => 'cfa', 'Cfa018454' => 'cfa', 'Cfa020585' => 'cfa', 'Ciclev10000424m.g' => 'ccl', 'Ciclev10003605m.g' => 'ccl', 'Ciclev10007828m.g' => 'ccl', 'Ciclev10014620m.g' => 'ccl', 'Ciclev10015169m.g' => 'ccl', 'Ciclev10018291m.g' => 'ccl', 'Ciclev10028256m.g' => 'ccl', 'Ciclev10033822m.g' => 'ccl', 'CiPaw.05G060300' => 'cil', 'CiPaw.05G085000' => 'cil', 'CiPaw.06G083700' => 'cil', 'CiPaw.06G120300' => 'cil', 'CiPaw.09G060500' => 'cil', 'CiPaw.09G123800' => 'cil', 'CiPaw.11G169700' => 'cil', 'CiPaw.12G118300' => 'cil', 'CiPaw.15G071000' => 'cil', 'CiPaw.15G081900' => 'cil', 'ClCG01G024610' => 'cla', 'ClCG03G006070' => 'cla', 'ClCG05G019250' => 'cla', 'ClCG09G009500' => 'cla', 'ClCG11G008200' => 'cla', 'ClCG11G018080' => 'cla', 'COL.COLO4_17373' => 'col', 'COL.COLO4_22994' => 'col', 'COL.COLO4_26389' => 'col', 'COL.COLO4_27170' => 'col', 'COL.COLO4_31074' => 'col', 'COL.COLO4_31465' => 'col', 'COL.COLO4_36438' => 'col', 'COL.COLO4_36439' => 'col', 'Cpa.g.c38781' => 'cpa', 'Cpa.g.sc128.12' => 'cpa', 'Cpa.g.sc166.7' => 'cpa', 'Cpa.g.sc166.8' => 'cpa', 'Cpa.g.sc20.111' => 'cpa', 'Cpa.g.sc27.31' => 'cpa', 'Cpa.g.sc64.36' => 'cpa', 'Cpa.g.sc64.37' => 'cpa', 'Cpa.g.sc66.49' => 'cpa', 'Cpa.g.sc80.64' => 'cpa', 'CsaV3_1G012320' => 'csa', 'CsaV3_2G008480' => 'csa', 'CsaV3_2G033450' => 'csa', 'CsaV3_3G044830' => 'csa', 'CsaV3_4G033710' => 'csa', 'CsaV3_6G051730' => 'csa', 'CsaV3_7G025350' => 'csa', 'CSS0001067' => 'camsi', 'CSS0005996' => 'camsi', 'CSS0006590' => 'camsi', 'CSS0009673' => 'camsi', 'CSS0010201' => 'camsi', 'CSS0010549' => 'camsi', 'CSS0011364' => 'camsi', 'CSS0014473' => 'camsi', 'CSS0014961' => 'camsi', 'CSS0020191' => 'camsi', 'CSS0021165' => 'camsi', 'CSS0022306' => 'camsi', 'CSS0030591' => 'camsi', 'CSS0030696' => 'camsi', 'CSS0032653' => 'camsi', 'CSS0037487' => 'camsi', 'CSS0041102' => 'camsi', 'CSS0041261' => 'camsi', 'CSS0046246' => 'camsi', 'CSS0049256' => 'camsi', 'DCAR_004075' => 'dca', 'DCAR_011538' => 'dca', 'DCAR_019553' => 'dca', 'DCAR_020952' => 'dca', 'DCAR_021739' => 'dca', 'DCAR_027407' => 'dca', 'DCAR_027913' => 'dca', 'DCAR_028066' => 'dca', 'Dinv05899' => 'din', 'Dinv07563' => 'din', 'Dinv08010' => 'din', 'Dinv14125' => 'din', 'Dinv20172' => 'din', 'Dinv30743' => 'din', 'Dinv31229' => 'din', 'Dinv34162' => 'din', 'Dinv36028' => 'din', 'Dinv39368' => 'din', 'Dinv40565' => 'din', 'Dinv41706' => 'din', 'Duzib052G0089' => 'dzi', 'Duzib116G0641' => 'dzi', 'Duzib132G0069' => 'dzi', 'Duzib132G1219' => 'dzi', 'Duzib147G0278' => 'dzi', 'Duzib160G0480' => 'dzi', 'Duzib170G0661' => 'dzi', 'Duzib177G0591' => 'dzi', 'Duzib187G1353' => 'dzi', 'Duzib192G0858' => 'dzi', 'Duzib192G0883' => 'dzi', 'Duzib213G0506' => 'dzi', 'Duzib235G0289' => 'dzi', 'Duzib251G0422' => 'dzi', 'ECA232G3898' => 'eca', 'ECA233G5950' => 'eca', 'ECA234G1699' => 'eca', 'ECA234G2421' => 'eca', 'ECA236G0426' => 'eca', 'ECA236G4331' => 'eca', 'ECA248G2573' => 'eca', 'EL10Ac1g00077' => 'bvu', 'EL10Ac1g01746' => 'bvu', 'EL10Ac2g03464' => 'bvu', 'EL10Ac4g08176' => 'bvu', 'EL10Ac7g17521' => 'bvu', 'EL10Ac8g20386' => 'bvu', 'EL10Ac9g21343' => 'bvu', 'EL10Ac9g22688' => 'bvu', 'Eucgr.B03434' => 'egr', 'Eucgr.D00618' => 'egr', 'Eucgr.E02395' => 'egr', 'Eucgr.F01129' => 'egr', 'Eucgr.F02622' => 'egr', 'Eucgr.F04207' => 'egr', 'FAN01G0570' => 'fan', 'FAN03G3351' => 'fan', 'FAN06G3702' => 'fan', 'FAN07G2149' => 'fan', 'FAN10G3758' => 'fan', 'FAN11G1170' => 'fan', 'FAN11G2050' => 'fan', 'FAN11G2724' => 'fan', 'FAN12G1700' => 'fan', 'FAN12G2028' => 'fan', 'FAN15G1160' => 'fan', 'FAN15G3063' => 'fan', 'FAN16G2540' => 'fan', 'FAN16G3077' => 'fan', 'FAN16G3624' => 'fan', 'FAN17G0221' => 'fan', 'FAN20G2492' => 'fan', 'FAN20G2905' => 'fan', 'FAN21G0548' => 'fan', 'FAN21G1300' => 'fan', 'FAN22G0077' => 'fan', 'FAN22G1315' => 'fan', 'FAN24G1280' => 'fan', 'FAN24G1445' => 'fan', 'FAN24G3527' => 'fan', 'FAN25G0464' => 'fan', 'FAN25G2885' => 'fan', 'FAN25G3270' => 'fan', 'FAN27G1101' => 'fan', 'FAN27G2846' => 'fan', 'FAN27G3524' => 'fan', 'FvH4_2g11770' => 'fve', 'FvH4_2g15630' => 'fve', 'FvH4_3g05570' => 'fve', 'FvH4_3g09110' => 'fve', 'FvH4_3g19940' => 'fve', 'FvH4_4g04821' => 'fve', 'FvH4_4g31480' => 'fve', 'FvH4_7g01740' => 'fve', 'Glyma.05G130400' => 'gma', 'Glyma.05G156400' => 'gma', 'Glyma.07G197000' => 'gma', 'Glyma.08G085151' => 'gma', 'Glyma.08G114500' => 'gma', 'Glyma.08G300400' => 'gma', 'Glyma.10G215800' => 'gma', 'Glyma.12G224400' => 'gma', 'Glyma.13G179300' => 'gma', 'Glyma.13G218151' => 'gma', 'Glyma.13G238800' => 'gma', 'Glyma.13G276900' => 'gma', 'Glyma.14G078200' => 'gma', 'Glyma.15G074500' => 'gma', 'Glyma.15G094100' => 'gma', 'Glyma.17G247200' => 'gma', 'Glyma.18G120100' => 'gma', 'Glyma.20G176000' => 'gma', 'Gohir.A01G063600' => 'ghi', 'Gohir.A01G170301' => 'ghi', 'Gohir.A02G060500' => 'ghi', 'Gohir.A05G133850' => 'ghi', 'Gohir.A05G161400' => 'ghi', 'Gohir.A06G012900' => 'ghi', 'Gohir.A06G035901' => 'ghi', 'Gohir.A06G127100' => 'ghi', 'Gohir.A06G210500' => 'ghi', 'Gohir.A08G008650' => 'ghi', 'Gohir.A09G072700' => 'ghi', 'Gohir.A09G088301' => 'ghi', 'Gohir.A10G040600' => 'ghi', 'Gohir.A12G036300' => 'ghi', 'Gohir.A12G143350' => 'ghi', 'Gohir.A12G165500' => 'ghi', 'Gohir.A13G145700' => 'ghi', 'Gohir.D01G050000' => 'ghi', 'Gohir.D01G051366' => 'ghi', 'Gohir.D01G161350' => 'ghi', 'Gohir.D02G065900' => 'ghi', 'Gohir.D05G164200' => 'ghi', 'Gohir.D05G355500' => 'ghi', 'Gohir.D06G010400' => 'ghi', 'Gohir.D06G111250' => 'ghi', 'Gohir.D06G132000' => 'ghi', 'Gohir.D06G210500' => 'ghi', 'Gohir.D07G165675' => 'ghi', 'Gohir.D08G062240' => 'ghi', 'Gohir.D08G086101' => 'ghi', 'Gohir.D08G138060' => 'ghi', 'Gohir.D09G072300' => 'ghi', 'Gohir.D10G041400' => 'ghi', 'Gohir.D11G191020' => 'ghi', 'Gohir.D11G212066' => 'ghi', 'Gohir.D12G036300' => 'ghi', 'Gohir.D12G168600' => 'ghi', 'Gohir.D13G150600' => 'ghi', 'Gorai.001G057300' => 'gra', 'Gorai.002G069900' => 'gra', 'Gorai.002G200000' => 'gra', 'Gorai.003G067600' => 'gra', 'Gorai.005G074800' => 'gra', 'Gorai.006G087300' => 'gra', 'Gorai.008G037500' => 'gra', 'Gorai.008G181400' => 'gra', 'Gorai.009G169400' => 'gra', 'Gorai.009G387900' => 'gra', 'Gorai.010G013300' => 'gra', 'Gorai.010G153800' => 'gra', 'Gorai.010G255800' => 'gra', 'Gorai.011G043700' => 'gra', 'Gorai.011G198900' => 'gra', 'Gorai.013G168400' => 'gra', 'GSVIVG01005212001' => 'vvi', 'GSVIVG01006163001' => 'vvi', 'GSVIVG01009625001' => 'vvi', 'GSVIVG01014338001' => 'vvi', 'GSVIVG01020005001' => 'vvi', 'GSVIVG01021450001' => 'vvi', 'GSVIVG01023975001' => 'vvi', 'GSVIVG01034490001' => 'vvi', 'HanXRQChr04g0112071' => 'han', 'HanXRQChr05g0131151' => 'han', 'HanXRQChr09g0262371' => 'han', 'HanXRQChr09g0268401' => 'han', 'HanXRQChr10g0279241' => 'han', 'HanXRQChr10g0297961' => 'han', 'HanXRQChr11g0326231' => 'han', 'HanXRQChr11g0328471' => 'han', 'HanXRQChr16g0507941' => 'han', 'HanXRQChr17g0560211' => 'han', 'Haze_02108' => 'cav', 'Haze_02428' => 'cav', 'Haze_05593' => 'cav', 'Haze_06448' => 'cav', 'Haze_09427' => 'cav', 'Haze_12022' => 'cav', 'Haze_17612' => 'cav', 'Haze_17928' => 'cav', 'Hma1.2p1_0032F.1_g019250' => 'hma', 'Hma1.2p1_0163F.1_g072690' => 'hma', 'Hma1.2p1_0265F.1_g106710' => 'hma', 'Hma1.2p1_0286F.1_g113970' => 'hma', 'Hma1.2p1_0363F.1_g136640' => 'hma', 'Hma1.2p1_0584F.1_g183470' => 'hma', 'Hma1.2p1_0885F.1_g232570' => 'hma', 'HPP92_006022' => 'vpl', 'HPP92_007320' => 'vpl', 'HPP92_011521' => 'vpl', 'HPP92_019387' => 'vpl', 'HPP92_024038' => 'vpl', 'Hund05891' => 'sun', 'Hund06450' => 'sun', 'Hund12053' => 'sun', 'Hund16800' => 'sun', 'Hund21222' => 'sun', 'Hund22896' => 'sun', 'Hund23746' => 'sun', 'Hund27083' => 'sun', 'Lalb_Chr02g0141831' => 'lal', 'Lalb_Chr02g0141841' => 'lal', 'Lalb_Chr05g0220411' => 'lal', 'Lalb_Chr06g0162081' => 'lal', 'Lalb_Chr09g0327651' => 'lal', 'Lalb_Chr13g0295051' => 'lal', 'Lalb_Chr15g0086801' => 'lal', 'Lalb_Chr16g0383781' => 'lal', 'Lalb_Chr16g0383791' => 'lal', 'Lalb_Chr18g0055441' => 'lal', 'Lalb_Chr18g0059611' => 'lal', 'Lalb_Chr20g0109661' => 'lal', 'Lalb_Chr20g0109831' => 'lal', 'Lalb_Chr20g0121871' => 'lal', 'Lalb_Chr22g0355361' => 'lal', 'Lalb_Chr25g0286371' => 'lal', 'Lj1A1187G43' => 'lonja', 'Lj1A1205T50' => 'lonja', 'Lj1A800G33' => 'lonja', 'Lj1C1187T7' => 'lonja', 'Lj1C843T11' => 'lonja', 'Lj1g0010940' => 'lja', 'Lj2A288T69' => 'lonja', 'Lj3g0024276' => 'lja', 'Lj4A47T76' => 'lonja', 'Lj4g0005805' => 'lja', 'Lj4g0006097' => 'lja', 'Lj4g0008528' => 'lja', 'Lj4g0024907' => 'lja', 'Lj5g0012472' => 'lja', 'Lj5g0018648' => 'lja', 'Lj6C789G1' => 'lonja', 'Lj6g0004000' => 'lja', 'Lj7A292G67' => 'lonja', 'Lj7A292T64' => 'lonja', 'Lj9A400T58' => 'lonja', 'Lsat_1_v5_gn_1_126181' => 'lsa', 'Lsat_1_v5_gn_4_123041' => 'lsa', 'Lsat_1_v5_gn_4_133620' => 'lsa', 'Lsat_1_v5_gn_4_53221' => 'lsa', 'Lsat_1_v5_gn_4_71961' => 'lsa', 'Lsat_1_v5_gn_7_105241' => 'lsa', 'Lsat_1_v5_gn_7_21361' => 'lsa', 'Lsat_1_v5_gn_7_28860' => 'lsa', 'Lsat_1_v5_gn_7_31260' => 'lsa', 'Lsat_1_v5_gn_8_52801' => 'lsa', 'Manes.02G191400' => 'mes', 'Manes.03G110100' => 'mes', 'Manes.04G071100' => 'mes', 'Manes.05G100500' => 'mes', 'Manes.05G164700' => 'mes', 'Manes.15G087000' => 'mes', 'Manes.15G121500' => 'mes', 'Manes.16G028300' => 'mes', 'Manes.17G046100' => 'mes', 'Manes.17G069800' => 'mes', 'Manes.18G100500' => 'mes', 'Mapoly0002s0109' => 'mpo', 'Mapoly0024s0007' => 'mpo', 'Mapoly0089s0032' => 'mpo', 'MBI04_g42241_MAGBIO' => 'mbi', 'MBI05_g11988_MAGBIO' => 'mbi', 'MBI05_g35452_MAGBIO' => 'mbi', 'MBI07_g30179_MAGBIO' => 'mbi', 'MBI07_g35859_MAGBIO' => 'mbi', 'MBI07_g35860_MAGBIO' => 'mbi', 'MBI07_g37166_MAGBIO' => 'mbi', 'MBI08_g18172_MAGBIO' => 'mbi', 'MBI09_g08441_MAGBIO' => 'mbi', 'MBI13_g01676_MAGBIO' => 'mbi', 'MBI14_g42955_MAGBIO' => 'mbi', 'MBI16_g13161_MAGBIO' => 'mbi', 'MBI17_g27204_MAGBIO' => 'mbi', 'MBI19_g21595_MAGBIO' => 'mbi', 'MD00G1148400' => 'mdo', 'MD02G1301200' => 'mdo', 'MD03G1227800' => 'mdo', 'MD05G1041100' => 'mdo', 'MD05G1124800' => 'mdo', 'MD05G1284000' => 'mdo', 'MD05G1338800' => 'mdo', 'MD05G1338900' => 'mdo', 'MD07G1022800' => 'mdo', 'MD10G1047500' => 'mdo', 'MD10G1127500' => 'mdo', 'MD10G1262300' => 'mdo', 'MD10G1293800' => 'mdo', 'MD16G1074300' => 'mdo', 'Medtr1g021670' => 'mtr', 'Medtr1g096320' => 'mtr', 'Medtr2g013690' => 'mtr', 'Medtr2g019450' => 'mtr', 'Medtr2g085170' => 'mtr', 'Medtr4g088785' => 'mtr', 'Medtr8g055930' => 'mtr', 'Medtr8g085850' => 'mtr', 'MELO3C002605.2' => 'cme', 'MELO3C003891.2' => 'cme', 'MELO3C004012.2' => 'cme', 'MELO3C007134.2' => 'cme', 'MELO3C008118.2' => 'cme', 'MELO3C016700.2' => 'cme', 'MELO3C024127.2' => 'cme', 'MELO3C033361.2' => 'cme', 'MELO3C033362.2' => 'cme', 'Migut.C00430' => 'egut', 'Migut.C01246' => 'egut', 'Migut.E00101' => 'egut', 'Migut.H01486' => 'egut', 'Migut.H01939' => 'egut', 'Migut.K00360' => 'egut', 'Migut.M00910' => 'egut', 'Migut.M01139' => 'egut', 'Migut.N02677' => 'egut', 'MSTRG.13252' => 'ama', 'MSTRG.14701' => 'ama', 'MSTRG.1521' => 'ama', 'MSTRG.15884' => 'ama', 'MSTRG.16242' => 'ama', 'MSTRG.22285' => 'ama', 'MSTRG.22444' => 'ama', 'MSTRG.2349' => 'ama', 'MSTRG.26308' => 'ama', 'MSTRG.28296' => 'ama', 'MSTRG.9895' => 'ama', 'Nitab4.5_0000110g0060' => 'nta', 'Nitab4.5_0000420g0130' => 'nta', 'Nitab4.5_0000422g0030' => 'nta', 'Nitab4.5_0000560g0180' => 'nta', 'Nitab4.5_0000703g0100' => 'nta', 'Nitab4.5_0000786g0200' => 'nta', 'Nitab4.5_0001336g0020' => 'nta', 'Nitab4.5_0001796g0030' => 'nta', 'Nitab4.5_0003348g0060' => 'nta', 'Nitab4.5_0003698g0040' => 'nta', 'Nitab4.5_0003942g0090' => 'nta', 'Nitab4.5_0004775g0070' => 'nta', 'Nitab4.5_0004864g0030' => 'nta', 'Nitab4.5_0005615g0020' => 'nta', 'Nitab4.5_0009288g0030' => 'nta', 'Nitab4.5_0009341g0010' => 'nta', 'Nitab4.5_0009535g0010' => 'nta', 'Nn1g03995' => 'nnu', 'Nn1g04100' => 'nnu', 'Nn1g06530' => 'nnu', 'Nn3g16404' => 'nnu', 'Nn3g17212' => 'nnu', 'Nn3g20776' => 'nnu', 'Nn3g21923' => 'nnu', 'Nn5g27737' => 'nnu', 'Nn5g29461' => 'nnu', 'Nn7g38355' => 'nnu', 'Nn8g39873' => 'nnu', 'Oeu000548.2' => 'oeu', 'Oeu004672.1' => 'oeu', 'Oeu015605.2' => 'oeu', 'Oeu016092.1' => 'oeu', 'Oeu017879.3' => 'oeu', 'Oeu024910.1' => 'oeu', 'Oeu028965.1' => 'oeu', 'Oeu031269.1' => 'oeu', 'Oeu031270.1' => 'oeu', 'Oeu032535.1' => 'oeu', 'Oeu034151.1' => 'oeu', 'Oeu034152.1' => 'oeu', 'Oeu034588.2' => 'oeu', 'Oeu050846.1' => 'oeu', 'Oeu050849.2' => 'oeu', 'Oeu051063.2' => 'oeu', 'Oeu052368.1' => 'oeu', 'Oeu052370.1' => 'oeu', 'Os01g0210400' => 'osa', 'Os01g0304300' => 'osa', 'Os01g0749100' => 'osa', 'Os02g0745800' => 'osa', 'Os03g0769050' => 'osa', 'Os05g0531500' => 'osa', 'Os06g0724300' => 'osa', 'Os11g0198100' => 'osa', 'Peaxi162Scf00069g01425' => 'pax', 'Peaxi162Scf00280g00811' => 'pax', 'Peaxi162Scf00310g00615' => 'pax', 'Peaxi162Scf00362g00542' => 'pax', 'Peaxi162Scf00461g00310' => 'pax', 'Peaxi162Scf00530g00118' => 'pax', 'Peaxi162Scf00541g00057' => 'pax', 'Peaxi162Scf00661g00017' => 'pax', 'Peaxi162Scf00926g00027' => 'pax', 'Peaxi162Scf01064g00263' => 'pax', 'Peaxi162Scf01211g00135' => 'pax', 'PGR004G2336' => 'pgr', 'PGR042G0327' => 'pgr', 'PGR042G1957' => 'pgr', 'PGR042G2003' => 'pgr', 'PGR042G3929' => 'pgr', 'PGR083G1137' => 'pgr', 'PGR083G1364' => 'pgr', 'PGSC0003DMG400003381' => 'stu', 'PGSC0003DMG400003417' => 'stu', 'PGSC0003DMG400008981' => 'stu', 'PGSC0003DMG400012417' => 'stu', 'PGSC0003DMG400012823' => 'stu', 'PGSC0003DMG400016885' => 'stu', 'PGSC0003DMG400022812' => 'stu', 'PGSC0003DMG400029726' => 'stu', 'PGSC0003DMG401009243' => 'stu', 'PGSC0003DMG401031505' => 'stu', 'PGSC0003DMG402031505' => 'stu', 'Phvul.001G017600' => 'pvu', 'Phvul.002G193500' => 'pvu', 'Phvul.002G228900' => 'pvu', 'Phvul.002G236800' => 'pvu', 'Phvul.003G049500' => 'pvu', 'Phvul.005G072000' => 'pvu', 'Phvul.006G164800' => 'pvu', 'Phvul.006G185100' => 'pvu', 'Phvul.007G090000' => 'pvu', 'Potri.001G399800' => 'ptr', 'Potri.002G149900' => 'ptr', 'Potri.004G044100' => 'ptr', 'Potri.004G177600' => 'ptr', 'Potri.009G138000' => 'ptr', 'Potri.010G094000' => 'ptr', 'Potri.011G053000' => 'ptr', 'Potri.011G119300' => 'ptr', 'Potri.013G113700' => 'ptr', 'Potri.018G107800' => 'ptr', 'Potri.019G084100' => 'ptr', 'Pp3c14_23720' => 'ppa', 'Pp3c16_6340' => 'ppa', 'Pp3c23_13420' => 'ppa', 'Pp3c24_2740' => 'ppa', 'Pp3c25_860' => 'ppa', 'Pp3c8_21750' => 'ppa', 'Prupe.1G273000' => 'ppe', 'Prupe.1G273700' => 'ppe', 'Prupe.1G274100' => 'ppe', 'Prupe.2G023300' => 'ppe', 'Prupe.4G048000' => 'ppe', 'Prupe.4G080400' => 'ppe', 'Prupe.4G181200' => 'ppe', 'Prupe.8G056900' => 'ppe', 'Prupe.8G168700' => 'ppe', 'Psat1g189080' => 'psa', 'Psat1g204760' => 'psa', 'Psat4g175560' => 'psa', 'Psat4g177720' => 'psa', 'Psat5g244240' => 'psa', 'Psat6g010720' => 'psa', 'Psat6g187200' => 'psa', 'Psat7g072040' => 'psa', 'PSO017G3501' => 'pso', 'PSO063G2148' => 'pso', 'PSO063G5608' => 'pso', 'PSO210G6392' => 'pso', 'PSO541G2319' => 'pso', 'PSO541G2836' => 'pso', 'PSO541G4012' => 'pso', 'PSO541G6253' => 'pso', 'PSO675G0580' => 'pso', 'PSO675G0856' => 'pso', 'PSO675G5635' => 'pso', 'PSO675G9157' => 'pso', 'PSO832G1660' => 'pso', 'PSO832G1969' => 'pso', 'QL02p007186' => 'qlo', 'QL02p033904' => 'qlo', 'QL03p064391' => 'qlo', 'QL05p040593' => 'qlo', 'QL05p058242' => 'qlo', 'QL08p021825' => 'qlo', 'QL11p004981' => 'qlo', 'RcHm_v2.0_Chr1g0318301' => 'rch', 'RcHm_v2.0_Chr4g0418501' => 'rch', 'RcHm_v2.0_Chr4g0439971' => 'rch', 'RcHm_v2.0_Chr5g0008541' => 'rch', 'RcHm_v2.0_Chr5g0014101' => 'rch', 'RcHm_v2.0_Chr5g0014131' => 'rch', 'RcHm_v2.0_Chr5g0033621' => 'rch', 'RcHm_v2.0_Chr6g0272041' => 'rch', 'RcHm_v2.0_Chr6g0278831' => 'rch', 'Rhsim02G0130400' => 'rsi', 'Rhsim02G0171100' => 'rsi', 'Rhsim05G0053000' => 'rsi', 'Rhsim05G0053100' => 'rsi', 'Rhsim06G0096500' => 'rsi', 'Rhsim06G0096600' => 'rsi', 'Rhsim06G0199100' => 'rsi', 'Rhsim12G0062300' => 'rsi', 'Rhsim12G0062800' => 'rsi', 'Sabra02G0118600' => 'sbr', 'Sabra04G0027300' => 'sbr', 'Sabra04G0119500' => 'sbr', 'Sabra08G0112500' => 'sbr', 'Sabra11G0036800' => 'sbr', 'Sabra11G0103800' => 'sbr', 'Sabra13G0096300' => 'sbr', 'Sabra16G0262300' => 'sbr', 'Sabra18G0091700' => 'sbr', 'Sabra19G0095400' => 'sbr', 'SalBow6G3080' => 'sbo', 'SalBow7G1157' => 'sbo', 'SalBow7G2123' => 'sbo', 'SalBow7G2285' => 'sbo', 'SalBow7G3537' => 'sbo', 'SalBow8G2947' => 'sbo', 'SalBow8G4463' => 'sbo', 'SalBow8G5466' => 'sbo', 'Sc01g0001750' => 'sci', 'Sc02g0006640' => 'sci', 'Sc02g0006670' => 'sci', 'Sc04g0008220' => 'sci', 'Sc05g0006190' => 'sci', 'Sc08g0002760' => 'sci', 'Sc17g0006170' => 'sci', 'Sc22g0002050' => 'sci', 'Sc23g0001190' => 'sci', 'Sc24g0000980' => 'sci', 'Sed0006245' => 'sed', 'Sed0007543' => 'sed', 'Sed0009411' => 'sed', 'Sed0010765' => 'sed', 'Sed0012944' => 'sed', 'Sed0014682' => 'sed', 'Sed0016174' => 'sed', 'Sed0016796' => 'sed', 'Sed0020317' => 'sed', 'Sed0021467' => 'sed', 'SEGI_01316' => 'sgi', 'SEGI_03374' => 'sgi', 'SEGI_16265' => 'sgi', 'SEGI_18569' => 'sgi', 'SEGI_20351' => 'sgi', 'SEGI_26395' => 'sgi', 'SEGI_29469' => 'sgi', 'SEGI_34771' => 'sgi', 'SEGI_36769' => 'sgi', 'SEGI_37139' => 'sgi', 'SGA_v2.0_scaffold100G29687' => 'sas', 'SGA_v2.0_scaffold118G32472' => 'sas', 'SGA_v2.0_scaffold14G07051' => 'sas', 'SGA_v2.0_scaffold183G39845' => 'sas', 'SGA_v2.0_scaffold1G00174' => 'sas', 'SGA_v2.0_scaffold22G09714' => 'sas', 'SGA_v2.0_scaffold333G48992' => 'sas', 'SGA_v2.0_scaffold46G17491' => 'sas', 'SGA_v2.0_scaffold49G18294' => 'sas', 'SGA_v2.0_scaffold63G21658' => 'sas', 'SHI01741' => 'shi', 'SHI05771' => 'shi', 'SHI18077' => 'shi', 'SHI20525' => 'shi', 'SHI20527' => 'shi', 'SHI20528' => 'shi', 'SMO172G0185' => 'smo', 'SMO198G0020' => 'smo', 'SMO351G0006' => 'smo', 'SMO356G0118' => 'smo', 'SMO358G0296' => 'smo', 'SMO367G0079' => 'smo', 'SMO367G1277' => 'smo', 'Solyc01g014220.3' => 'sly', 'Solyc01g111770.2' => 'sly', 'Solyc02g078180.3' => 'sly', 'Solyc03g006430.3' => 'sly', 'Solyc03g006456.1' => 'sly', 'Solyc03g079860.2' => 'sly', 'Solyc04g079770.3' => 'sly', 'Solyc05g007430.4' => 'sly', 'Solyc07g063150.3' => 'sly', 'Solyc08g016620.3' => 'sly', 'Solyc09g057590.3' => 'sly', 'Solyc09g057600.1' => 'sly', 'Solyc10g009050.3' => 'sly', 'Solyc11g017420.2' => 'sly', 'Sopen01g053810' => 'spe', 'Sopen02g023040' => 'spe', 'Sopen03g002440' => 'spe', 'Sopen04g033350' => 'spe', 'Sopen05g003310' => 'spe', 'Sopen07g004050' => 'spe', 'Sopen07g031340' => 'spe', 'Sopen08g006990' => 'spe', 'Sopen10g004830' => 'spe', 'Sopen11g009370' => 'spe', 'Sp1g24450' => 'spa', 'Sp1g29670' => 'spa', 'Sp1g39600' => 'spa', 'Sp2g11080' => 'spa', 'Sp2g13970' => 'spa', 'Sp4g16130' => 'spa', 'Sp6g13080' => 'spa', 'Sp7g37270' => 'spa', 'TAR371G0065' => 'tar', 'TAR376G0340' => 'tar', 'TAR376G0435' => 'tar', 'TAR381G0002' => 'tar', 'TAR381G1236' => 'tar', 'TAR624G0055' => 'tar', 'TAR624G0324' => 'tar', 'TAR624G0696' => 'tar', 'TAR624G0906' => 'tar', 'TAR625G0107' => 'tar', 'TAR626G0015' => 'tar', 'TAR626G1356' => 'tar', 'TAR627G0888' => 'tar', 'TAR628G0399' => 'tar', 'TAR628G1327' => 'tar', 'TAR629G2831' => 'tar', 'TAR629G2874' => 'tar', 'TAR633G1432' => 'tar', 'TAR633G2771' => 'tar', 'THA.LOC104803394' => 'tha', 'THA.LOC104805153' => 'tha', 'THA.LOC104806784' => 'tha', 'THA.LOC104810473' => 'tha', 'THA.LOC104813100' => 'tha', 'THA.LOC104814215' => 'tha', 'THA.LOC104815554' => 'tha', 'THA.LOC104820544' => 'tha', 'THA.LOC104824754' => 'tha', 'THA.LOC104827717' => 'tha', 'Thecc.02G031400' => 'tca', 'Thecc.02G055900' => 'tca', 'Thecc.02G350800' => 'tca', 'Thecc.06G150900' => 'tca', 'Thecc.06G186600' => 'tca', 'Thecc.07G089600' => 'tca', 'Thecc.08G020400' => 'tca', 'Thecc.08G182100' => 'tca', 'Thhalv10000873m.g' => 'esa', 'Thhalv10004185m.g' => 'esa', 'Thhalv10006981m.g' => 'esa', 'Thhalv10007204m.g' => 'esa', 'Thhalv10011374m.g' => 'esa', 'Thhalv10013482m.g' => 'esa', 'Thhalv10017801m.g' => 'esa', 'Thhalv10024983m.g' => 'esa', 'TPR.G12072' => 'tpr', 'TPR.G15769' => 'tpr', 'TPR.G16504' => 'tpr', 'TPR.G16506' => 'tpr', 'TPR.G24345' => 'tpr', 'TPR.G26666' => 'tpr', 'TPR.G27320' => 'tpr', 'TPR.G31819' => 'tpr', 'TPR.G38879' => 'tpr', 'TPR.G39015' => 'tpr', 'TPR.G8819' => 'tpr', 'TWI09G0924' => 'twi', 'TWI12G0811' => 'twi', 'TWI12G1294' => 'twi', 'TWI31G0150' => 'twi', 'TWI36G1262' => 'twi', 'TWI38G1287' => 'twi', 'TWI38G1633' => 'twi', 'TWI38G1982' => 'twi', 'TWI39G0116' => 'twi', 'TWI60G1011' => 'twi', 'TWI63G0171' => 'twi', 'TWI73G0839' => 'twi', 'TWI79G1511' => 'twi', 'unitig_0.g915' => 'ugi', 'unitig_0.g916' => 'ugi', 'unitig_21.g20219' => 'ugi', 'unitig_21.g20416' => 'ugi', 'unitig_578.g16132' => 'ugi', 'unitig_578.g16718' => 'ugi', 'unitig_62.g23481' => 'ugi', 'unitig_744.g24535' => 'ugi', 'unitig_749.g13525' => 'ugi', 'vmacro01248' => 'vma', 'vmacro02290' => 'vma', 'vmacro10946' => 'vma', 'vmacro11865' => 'vma', 'vmacro12493' => 'vma', 'vmacro17322' => 'vma', 'vmacro21599' => 'vma', 'vmacro23041' => 'vma', 'VMungo0251G0004' => 'vmu', 'VMungo0251G2639' => 'vmu', 'VMungo0251G2967' => 'vmu', 'VMungo0540G0864' => 'vmu', 'VMungo0540G1569' => 'vmu', 'VMungo0647G0317' => 'vmu', 'VMungo0720G1373' => 'vmu', 'VMungo0720G1508' => 'vmu', 'VMungo1080G0485' => 'vmu', 'VMungo1215G3177' => 'vmu', 'Zm00001eb112600' => 'zma', 'Zm00001eb120220' => 'zma', 'Zm00001eb153240' => 'zma', 'Zm00001eb168880' => 'zma', 'Zm00001eb213920' => 'zma', 'Zm00001eb228280' => 'zma', 'Zm00001eb254580' => 'zma', 'Zm00001eb272180' => 'zma', 'Zm00001eb293190' => 'zma', 'Zm00001eb322930' => 'zma', 'Zm00001eb353360' => 'zma', 'Zm00001eb353390' => 'zma', 'Zm00001eb353430' => 'zma', 'Zm00001eb353440' => 'zma', 'Zm00001eb353780' => 'zma' ) $gf_id = 'HOM05D000499' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000499' ) $data_identifier = 'HOM05D000499' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 29, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 12, 'amhyb' => (int) 8, 'aly' => (int) 12, 'aox' => (int) 9, 'arhy' => (int) 26, 'ath' => (int) 8, 'atr' => (int) 7, 'acertr' => (int) 10, 'cqu' => (int) 15, 'bca' => (int) 29, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 11, 'cansat' => (int) 8, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 9, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 8, 'cpa' => (int) 10, 'csa' => (int) 7, 'camsi' => (int) 20, 'dca' => (int) 8, 'din' => (int) 12, 'dzi' => (int) 14, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 6, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 38, 'gra' => (int) 16, 'vvi' => (int) 8, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 5, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 11, 'lja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 11, 'mpo' => (int) 3, 'mbi' => (int) 14, 'mdo' => (int) 14, 'mtr' => (int) 8, 'cme' => (int) 9, 'egut' => (int) 9, 'ama' => (int) 11, 'nta' => (int) 17, 'nnu' => (int) 11, 'oeu' => (int) 18, 'osa' => (int) 8, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 6, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 9, 'rsi' => (int) 9, 'sbr' => (int) 10, 'sbo' => (int) 8, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 10, 'sas' => (int) 10, 'shi' => (int) 6, 'smo' => (int) 7, 'sly' => (int) 14, 'spe' => (int) 10, 'spa' => (int) 8, 'tar' => (int) 19, 'tha' => (int) 10, 'tca' => (int) 8, 'esa' => (int) 8, 'tpr' => (int) 11, 'twi' => (int) 13, 'ugi' => (int) 9, 'vma' => (int) 8, 'vmu' => (int) 10, 'zma' => (int) 15 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb353780' $species_info = array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ) $local_species = 'sci' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000499', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1066', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p29780' => 'bna', 'A02p33180' => 'bna', 'A03p16470' => 'bna', 'A03p66010' => 'bna', 'A04p25970' => 'bna', 'A06p01270' => 'bna', 'A06p46080' => 'bna', 'A07p11400' => 'bna', 'A08p01840' => 'bna', 'A08p08230' => 'bna', 'A08p25740' => 'bna', 'A09p32070' => 'bna', 'A09p37830' => 'bna', 'A09p42840' => 'bna', 'A09p42850' => 'bna', 'Aa31LG10G2060' => 'aar', 'Aa31LG2G7410' => 'aar', 'Aa31LG6G10200' => 'aar', 'Aa31LG6G16680' => 'aar', 'Aa31LG6G8470' => 'aar', 'Aa31LG9G12730' => 'aar', 'Aa31LG9G13680' => 'aar', 'Aa31LG9G14920' => 'aar', 'Aa31LG9G6650' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4977' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5467' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3254' => 'aag', 'Actinidia02578' => 'ach', 'Actinidia07693' => 'ach', 'Actinidia08413' => 'ach', 'Actinidia08414' => 'ach', 'Actinidia15289' => 'ach', 'Actinidia19871' => 'ach', 'Actinidia21475' => 'ach', 'Actinidia22576' => 'ach', 'Actinidia28327' => 'ach', 'Actinidia32491' => 'ach', 'Actinidia39463' => 'ach', 'Actinidia39571' => 'ach', 'Ah.01g013750' => 'amhyb', 'Ah.01g023210' => 'amhyb', 'Ah.04g164850' => 'amhyb', 'Ah.05g178060' => 'amhyb', 'Ah.07g204270' => 'amhyb', 'Ah.07g208480' => 'amhyb', 'Ah.09g237410' => 'amhyb', 'Ah.14g089460' => 'amhyb', 'AL1G41790' => 'aly', 'AL1G49050' => 'aly', 'AL1G53810' => 'aly', 'AL1G61400' => 'aly', 'AL4G18580' => 'aly', 'AL5G12510' => 'aly', 'AL5G12540' => 'aly', 'AL6G43230' => 'aly', 'AL7G10370' => 'aly', 'AL7G19250' => 'aly', 'AL8G12240' => 'aly', 'AL8G18540' => 'aly', 'Aqoxy1G02409' => 'aox', 'Aqoxy2G03993' => 'aox', 'Aqoxy3G03357' => 'aox', 'Aqoxy4G00785' => 'aox', 'Aqoxy5G02598' => 'aox', 'Aqoxy6G00132' => 'aox', 'Aqoxy7G01776' => 'aox', 'Aqoxy7G02316' => 'aox', 'Aqoxy7G03973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.12AFKW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B8730' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27IQR1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3F75VG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3RE0GA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41TCQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.527VTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FIR39' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5W8UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DA38EV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ63HS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H1I32C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HC27T5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4M8AP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7N3CZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9UVDZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LS1NQA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT1D4B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SKC4TM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCFV76' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF9Q1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQWD9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1ZM88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WE07RT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YCK7VH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJE6Q6' => 'arhy', 'AT1G28240' => 'ath', 'AT1G34550' => 'ath', 'AT1G53040' => 'ath', 'AT2G02910' => 'ath', 'AT4G09630' => 'ath', 'AT4G38500' => 'ath', 'AT5G42660' => 'ath', 'AT5G46220' => 'ath', 'ATR0152G026' => 'atr', 'ATR0564G343' => 'atr', 'ATR0706G151' => 'atr', 'ATR0733G207' => 'atr', 'ATR0751G234' => 'atr', 'ATR0807G048' => 'atr', 'ATR1091G084' => 'atr', 'Atru.chr10.1229' => 'acertr', 'Atru.chr10.1230' => 'acertr', 'Atru.chr10.1874' => 'acertr', 'Atru.chr11.1808' => 'acertr', 'Atru.chr13.1795' => 'acertr', 'Atru.chr13.570' => 'acertr', 'Atru.chr2.2608' => 'acertr', 'Atru.chr2.2609' => 'acertr', 'Atru.chr5.3428' => 'acertr', 'Atru.chr8.1171' => 'acertr', 'AUR62004651' => 'cqu', 'AUR62008675' => 'cqu', 'AUR62010014' => 'cqu', 'AUR62013004' => 'cqu', 'AUR62014825' => 'cqu', 'AUR62015015' => 'cqu', 'AUR62015151' => 'cqu', 'AUR62017020' => 'cqu', 'AUR62019422' => 'cqu', 'AUR62023570' => 'cqu', 'AUR62025571' => 'cqu', 'AUR62029098' => 'cqu', 'AUR62033863' => 'cqu', 'AUR62034296' => 'cqu', 'AUR62040075' => 'cqu', 'BcaB02g07334' => 'bca', 'BcaB02g10575' => 'bca', 'BcaB03g12119' => 'bca', 'BcaB03g12120' => 'bca', 'BcaB03g13945' => 'bca', 'BcaB04g17123' => 'bca', 'BcaB04g17867' => 'bca', 'BcaB04g19839' => 'bca', 'BcaB07g30317' => 'bca', 'BcaB07g32432' => 'bca', 'BcaB07g33362' => 'bca', 'BcaB08g36611' => 'bca', 'BcaC01g00028' => 'bca', 'BcaC01g01356' => 'bca', 'BcaC01g02034' => 'bca', 'BcaC01g06051' => 'bca', 'BcaC03g16839' => 'bca', 'BcaC03g17176' => 'bca', 'BcaC05g26829' => 'bca', 'BcaC06g31490' => 'bca', 'BcaC06g35344' => 'bca', 'BcaC06g36570' => 'bca', 'BcaC07g37537' => 'bca', 'BcaC08g43491' => 'bca', 'BcaC08g43773' => 'bca', 'BcaNung00234' => 'bca', 'BcaNung01982' => 'bca', 'BcaNung03707' => 'bca', 'BcaNung06454' => 'bca', 'BolC2t10762H' => 'bol', 'BolC2t11191H' => 'bol', 'BolC3t14322H' => 'bol', 'BolC3t19747H' => 'bol', 'BolC3t21425H' => 'bol', 'BolC4t27800H' => 'bol', 'BolC5t31423H' => 'bol', 'BolC6t35951H' => 'bol', 'BolC6t36282H' => 'bol', 'BolC7t40678H' => 'bol', 'BolC7t40679H' => 'bol', 'BolC7t42222H' => 'bol', 'BolC7t43492H' => 'bol', 'BolC7t46785H' => 'bol', 'BolC8t47853H' => 'bol', 'BolC9t56805H' => 'bol', 'BraA02t08000Z' => 'bra', 'BraA02t08341Z' => 'bra', 'BraA03t10936Z' => 'bra', 'BraA03t15657Z' => 'bra', 'BraA04t18100Z' => 'bra', 'BraA05t20523Z' => 'bra', 'BraA06t23353Z' => 'bra', 'BraA06t27473Z' => 'bra', 'BraA06t27769Z' => 'bra', 'BraA07t28928Z' => 'bra', 'BraA08t32236Z' => 'bra', 'BraA08t32841Z' => 'bra', 'BraA08t34524Z' => 'bra', 'BraA09t38742Z' => 'bra', 'BraA09t39295Z' => 'bra', 'C02p47180' => 'bna', 'C02p50990' => 'bna', 'C03p19360' => 'bna', 'C03p74950' => 'bna', 'C03p91000' => 'bna', 'C04p63260' => 'bna', 'C05p27050' => 'bna', 'C06p08750' => 'bna', 'C06p11490' => 'bna', 'C07p02820' => 'bna', 'C07p17180' => 'bna', 'C07p29440' => 'bna', 'C07p63730' => 'bna', 'C09p39260' => 'bna', 'CAN.G1164.34' => 'can', 'CAN.G1164.39' => 'can', 'CAN.G1530.3' => 'can', 'CAN.G162.61' => 'can', 'CAN.G176.6' => 'can', 'CAN.G289.49' => 'can', 'CAN.G370.21' => 'can', 'CAN.G370.22' => 'can', 'CAN.G371.117' => 'can', 'CAN.G58.37' => 'can', 'CAN.G588.98' => 'can', 'CANSAT21G2266' => 'cansat', 'CANSAT25G2799' => 'cansat', 'CANSAT35G0862' => 'cansat', 'CANSAT35G1704' => 'cansat', 'CANSAT35G1760' => 'cansat', 'CANSAT56G3971' => 'cansat', 'CANSAT56G4116' => 'cansat', 'CANSAT80G1259' => 'cansat', 'CARHR027730' => 'chi', 'CARHR033880' => 'chi', 'CARHR043270' => 'chi', 'CARHR145330' => 'chi', 'CARHR145340' => 'chi', 'CARHR175570' => 'chi', 'CARHR181570' => 'chi', 'CARHR258470' => 'chi', 'CARHR260490' => 'chi', 'CARHR294220' => 'chi', 'Carub.0001s2668' => 'cru', 'Carub.0001s3257' => 'cru', 'Carub.0001s4220' => 'cru', 'Carub.0005s0179' => 'cru', 'Carub.0006s2807' => 'cru', 'Carub.0007s0039' => 'cru', 'Carub.0008s0169' => 'cru', 'Carub.0008s0636' => 'cru', 'Ca_00338_v3' => 'car', 'Ca_00542_v3' => 'car', 'Ca_01844_v3' => 'car', 'Ca_10611_v3' => 'car', 'Ca_13326_v3' => 'car', 'Ca_17944_v3' => 'car', 'Ca_18546_v3' => 'car', 'Ca_24219_v3' => 'car', 'Ca_29972_v3' => 'car', 'CBR_g3681' => 'cbr', 'CBR_g40021' => 'cbr', 'Cc01_g08140' => 'ccan', 'Cc02_g13410' => 'ccan', 'Cc02_g37480' => 'ccan', 'Cc05_g12030' => 'ccan', 'Cc09_g03370' => 'ccan', 'Cc09_g10300' => 'ccan', 'Cc10_g03530' => 'ccan', 'Cc10_g11380' => 'ccan', 'CDE01G0176' => 'cde', 'CDE02G0675' => 'cde', 'CDE02G0942' => 'cde', 'CDE02G1153' => 'cde', 'CDE02G4177' => 'cde', 'CDE04G2117' => 'cde', 'CDE04G2736' => 'cde', 'CDE08G1161' => 'cde', 'CDE09G1238' => 'cde', 'Cfa000467' => 'cfa', 'Cfa000947' => 'cfa', 'Cfa004969' => 'cfa', 'Cfa005284' => 'cfa', 'Cfa008993' => 'cfa', 'Cfa018187' => 'cfa', 'Cfa018454' => 'cfa', 'Cfa020585' => 'cfa', 'Ciclev10000424m.g' => 'ccl', 'Ciclev10003605m.g' => 'ccl', 'Ciclev10007828m.g' => 'ccl', 'Ciclev10014620m.g' => 'ccl', 'Ciclev10015169m.g' => 'ccl', 'Ciclev10018291m.g' => 'ccl', 'Ciclev10028256m.g' => 'ccl', 'Ciclev10033822m.g' => 'ccl', 'CiPaw.05G060300' => 'cil', 'CiPaw.05G085000' => 'cil', 'CiPaw.06G083700' => 'cil', 'CiPaw.06G120300' => 'cil', 'CiPaw.09G060500' => 'cil', 'CiPaw.09G123800' => 'cil', 'CiPaw.11G169700' => 'cil', 'CiPaw.12G118300' => 'cil', 'CiPaw.15G071000' => 'cil', 'CiPaw.15G081900' => 'cil', 'ClCG01G024610' => 'cla', 'ClCG03G006070' => 'cla', 'ClCG05G019250' => 'cla', 'ClCG09G009500' => 'cla', 'ClCG11G008200' => 'cla', 'ClCG11G018080' => 'cla', 'COL.COLO4_17373' => 'col', 'COL.COLO4_22994' => 'col', 'COL.COLO4_26389' => 'col', 'COL.COLO4_27170' => 'col', 'COL.COLO4_31074' => 'col', 'COL.COLO4_31465' => 'col', 'COL.COLO4_36438' => 'col', 'COL.COLO4_36439' => 'col', 'Cpa.g.c38781' => 'cpa', 'Cpa.g.sc128.12' => 'cpa', 'Cpa.g.sc166.7' => 'cpa', 'Cpa.g.sc166.8' => 'cpa', 'Cpa.g.sc20.111' => 'cpa', 'Cpa.g.sc27.31' => 'cpa', 'Cpa.g.sc64.36' => 'cpa', 'Cpa.g.sc64.37' => 'cpa', 'Cpa.g.sc66.49' => 'cpa', 'Cpa.g.sc80.64' => 'cpa', 'CsaV3_1G012320' => 'csa', 'CsaV3_2G008480' => 'csa', 'CsaV3_2G033450' => 'csa', 'CsaV3_3G044830' => 'csa', 'CsaV3_4G033710' => 'csa', 'CsaV3_6G051730' => 'csa', 'CsaV3_7G025350' => 'csa', 'CSS0001067' => 'camsi', 'CSS0005996' => 'camsi', 'CSS0006590' => 'camsi', 'CSS0009673' => 'camsi', 'CSS0010201' => 'camsi', 'CSS0010549' => 'camsi', 'CSS0011364' => 'camsi', 'CSS0014473' => 'camsi', 'CSS0014961' => 'camsi', 'CSS0020191' => 'camsi', 'CSS0021165' => 'camsi', 'CSS0022306' => 'camsi', 'CSS0030591' => 'camsi', 'CSS0030696' => 'camsi', 'CSS0032653' => 'camsi', 'CSS0037487' => 'camsi', 'CSS0041102' => 'camsi', 'CSS0041261' => 'camsi', 'CSS0046246' => 'camsi', 'CSS0049256' => 'camsi', 'DCAR_004075' => 'dca', 'DCAR_011538' => 'dca', 'DCAR_019553' => 'dca', 'DCAR_020952' => 'dca', 'DCAR_021739' => 'dca', 'DCAR_027407' => 'dca', 'DCAR_027913' => 'dca', 'DCAR_028066' => 'dca', 'Dinv05899' => 'din', 'Dinv07563' => 'din', 'Dinv08010' => 'din', 'Dinv14125' => 'din', 'Dinv20172' => 'din', 'Dinv30743' => 'din', 'Dinv31229' => 'din', 'Dinv34162' => 'din', 'Dinv36028' => 'din', 'Dinv39368' => 'din', 'Dinv40565' => 'din', 'Dinv41706' => 'din', 'Duzib052G0089' => 'dzi', 'Duzib116G0641' => 'dzi', 'Duzib132G0069' => 'dzi', 'Duzib132G1219' => 'dzi', 'Duzib147G0278' => 'dzi', 'Duzib160G0480' => 'dzi', 'Duzib170G0661' => 'dzi', 'Duzib177G0591' => 'dzi', 'Duzib187G1353' => 'dzi', 'Duzib192G0858' => 'dzi', 'Duzib192G0883' => 'dzi', 'Duzib213G0506' => 'dzi', 'Duzib235G0289' => 'dzi', 'Duzib251G0422' => 'dzi', 'ECA232G3898' => 'eca', 'ECA233G5950' => 'eca', 'ECA234G1699' => 'eca', 'ECA234G2421' => 'eca', 'ECA236G0426' => 'eca', 'ECA236G4331' => 'eca', 'ECA248G2573' => 'eca', 'EL10Ac1g00077' => 'bvu', 'EL10Ac1g01746' => 'bvu', 'EL10Ac2g03464' => 'bvu', 'EL10Ac4g08176' => 'bvu', 'EL10Ac7g17521' => 'bvu', 'EL10Ac8g20386' => 'bvu', 'EL10Ac9g21343' => 'bvu', 'EL10Ac9g22688' => 'bvu', 'Eucgr.B03434' => 'egr', 'Eucgr.D00618' => 'egr', 'Eucgr.E02395' => 'egr', 'Eucgr.F01129' => 'egr', 'Eucgr.F02622' => 'egr', 'Eucgr.F04207' => 'egr', 'FAN01G0570' => 'fan', 'FAN03G3351' => 'fan', 'FAN06G3702' => 'fan', 'FAN07G2149' => 'fan', 'FAN10G3758' => 'fan', 'FAN11G1170' => 'fan', 'FAN11G2050' => 'fan', 'FAN11G2724' => 'fan', 'FAN12G1700' => 'fan', 'FAN12G2028' => 'fan', 'FAN15G1160' => 'fan', 'FAN15G3063' => 'fan', 'FAN16G2540' => 'fan', 'FAN16G3077' => 'fan', 'FAN16G3624' => 'fan', 'FAN17G0221' => 'fan', 'FAN20G2492' => 'fan', 'FAN20G2905' => 'fan', 'FAN21G0548' => 'fan', 'FAN21G1300' => 'fan', 'FAN22G0077' => 'fan', 'FAN22G1315' => 'fan', 'FAN24G1280' => 'fan', 'FAN24G1445' => 'fan', 'FAN24G3527' => 'fan', 'FAN25G0464' => 'fan', 'FAN25G2885' => 'fan', 'FAN25G3270' => 'fan', 'FAN27G1101' => 'fan', 'FAN27G2846' => 'fan', 'FAN27G3524' => 'fan', 'FvH4_2g11770' => 'fve', 'FvH4_2g15630' => 'fve', 'FvH4_3g05570' => 'fve', 'FvH4_3g09110' => 'fve', 'FvH4_3g19940' => 'fve', 'FvH4_4g04821' => 'fve', 'FvH4_4g31480' => 'fve', 'FvH4_7g01740' => 'fve', 'Glyma.05G130400' => 'gma', 'Glyma.05G156400' => 'gma', 'Glyma.07G197000' => 'gma', 'Glyma.08G085151' => 'gma', 'Glyma.08G114500' => 'gma', 'Glyma.08G300400' => 'gma', 'Glyma.10G215800' => 'gma', 'Glyma.12G224400' => 'gma', 'Glyma.13G179300' => 'gma', 'Glyma.13G218151' => 'gma', 'Glyma.13G238800' => 'gma', 'Glyma.13G276900' => 'gma', 'Glyma.14G078200' => 'gma', 'Glyma.15G074500' => 'gma', 'Glyma.15G094100' => 'gma', 'Glyma.17G247200' => 'gma', 'Glyma.18G120100' => 'gma', 'Glyma.20G176000' => 'gma', 'Gohir.A01G063600' => 'ghi', 'Gohir.A01G170301' => 'ghi', 'Gohir.A02G060500' => 'ghi', 'Gohir.A05G133850' => 'ghi', 'Gohir.A05G161400' => 'ghi', 'Gohir.A06G012900' => 'ghi', 'Gohir.A06G035901' => 'ghi', 'Gohir.A06G127100' => 'ghi', 'Gohir.A06G210500' => 'ghi', 'Gohir.A08G008650' => 'ghi', 'Gohir.A09G072700' => 'ghi', 'Gohir.A09G088301' => 'ghi', 'Gohir.A10G040600' => 'ghi', 'Gohir.A12G036300' => 'ghi', 'Gohir.A12G143350' => 'ghi', 'Gohir.A12G165500' => 'ghi', 'Gohir.A13G145700' => 'ghi', 'Gohir.D01G050000' => 'ghi', 'Gohir.D01G051366' => 'ghi', 'Gohir.D01G161350' => 'ghi', 'Gohir.D02G065900' => 'ghi', 'Gohir.D05G164200' => 'ghi', 'Gohir.D05G355500' => 'ghi', 'Gohir.D06G010400' => 'ghi', 'Gohir.D06G111250' => 'ghi', 'Gohir.D06G132000' => 'ghi', 'Gohir.D06G210500' => 'ghi', 'Gohir.D07G165675' => 'ghi', 'Gohir.D08G062240' => 'ghi', 'Gohir.D08G086101' => 'ghi', 'Gohir.D08G138060' => 'ghi', 'Gohir.D09G072300' => 'ghi', 'Gohir.D10G041400' => 'ghi', 'Gohir.D11G191020' => 'ghi', 'Gohir.D11G212066' => 'ghi', 'Gohir.D12G036300' => 'ghi', 'Gohir.D12G168600' => 'ghi', 'Gohir.D13G150600' => 'ghi', 'Gorai.001G057300' => 'gra', 'Gorai.002G069900' => 'gra', 'Gorai.002G200000' => 'gra', 'Gorai.003G067600' => 'gra', 'Gorai.005G074800' => 'gra', 'Gorai.006G087300' => 'gra', 'Gorai.008G037500' => 'gra', 'Gorai.008G181400' => 'gra', 'Gorai.009G169400' => 'gra', 'Gorai.009G387900' => 'gra', 'Gorai.010G013300' => 'gra', 'Gorai.010G153800' => 'gra', 'Gorai.010G255800' => 'gra', 'Gorai.011G043700' => 'gra', 'Gorai.011G198900' => 'gra', 'Gorai.013G168400' => 'gra', 'GSVIVG01005212001' => 'vvi', 'GSVIVG01006163001' => 'vvi', 'GSVIVG01009625001' => 'vvi', 'GSVIVG01014338001' => 'vvi', 'GSVIVG01020005001' => 'vvi', 'GSVIVG01021450001' => 'vvi', 'GSVIVG01023975001' => 'vvi', 'GSVIVG01034490001' => 'vvi', 'HanXRQChr04g0112071' => 'han', 'HanXRQChr05g0131151' => 'han', 'HanXRQChr09g0262371' => 'han', 'HanXRQChr09g0268401' => 'han', 'HanXRQChr10g0279241' => 'han', 'HanXRQChr10g0297961' => 'han', 'HanXRQChr11g0326231' => 'han', 'HanXRQChr11g0328471' => 'han', 'HanXRQChr16g0507941' => 'han', 'HanXRQChr17g0560211' => 'han', 'Haze_02108' => 'cav', 'Haze_02428' => 'cav', 'Haze_05593' => 'cav', 'Haze_06448' => 'cav', 'Haze_09427' => 'cav', 'Haze_12022' => 'cav', 'Haze_17612' => 'cav', 'Haze_17928' => 'cav', 'Hma1.2p1_0032F.1_g019250' => 'hma', 'Hma1.2p1_0163F.1_g072690' => 'hma', 'Hma1.2p1_0265F.1_g106710' => 'hma', 'Hma1.2p1_0286F.1_g113970' => 'hma', 'Hma1.2p1_0363F.1_g136640' => 'hma', 'Hma1.2p1_0584F.1_g183470' => 'hma', 'Hma1.2p1_0885F.1_g232570' => 'hma', 'HPP92_006022' => 'vpl', 'HPP92_007320' => 'vpl', 'HPP92_011521' => 'vpl', 'HPP92_019387' => 'vpl', 'HPP92_024038' => 'vpl', 'Hund05891' => 'sun', 'Hund06450' => 'sun', 'Hund12053' => 'sun', 'Hund16800' => 'sun', 'Hund21222' => 'sun', 'Hund22896' => 'sun', 'Hund23746' => 'sun', 'Hund27083' => 'sun', 'Lalb_Chr02g0141831' => 'lal', 'Lalb_Chr02g0141841' => 'lal', 'Lalb_Chr05g0220411' => 'lal', 'Lalb_Chr06g0162081' => 'lal', 'Lalb_Chr09g0327651' => 'lal', 'Lalb_Chr13g0295051' => 'lal', 'Lalb_Chr15g0086801' => 'lal', 'Lalb_Chr16g0383781' => 'lal', 'Lalb_Chr16g0383791' => 'lal', 'Lalb_Chr18g0055441' => 'lal', 'Lalb_Chr18g0059611' => 'lal', 'Lalb_Chr20g0109661' => 'lal', 'Lalb_Chr20g0109831' => 'lal', 'Lalb_Chr20g0121871' => 'lal', 'Lalb_Chr22g0355361' => 'lal', 'Lalb_Chr25g0286371' => 'lal', 'Lj1A1187G43' => 'lonja', 'Lj1A1205T50' => 'lonja', 'Lj1A800G33' => 'lonja', 'Lj1C1187T7' => 'lonja', 'Lj1C843T11' => 'lonja', 'Lj1g0010940' => 'lja', 'Lj2A288T69' => 'lonja', 'Lj3g0024276' => 'lja', 'Lj4A47T76' => 'lonja', 'Lj4g0005805' => 'lja', 'Lj4g0006097' => 'lja', 'Lj4g0008528' => 'lja', 'Lj4g0024907' => 'lja', 'Lj5g0012472' => 'lja', 'Lj5g0018648' => 'lja', 'Lj6C789G1' => 'lonja', 'Lj6g0004000' => 'lja', 'Lj7A292G67' => 'lonja', 'Lj7A292T64' => 'lonja', 'Lj9A400T58' => 'lonja', 'Lsat_1_v5_gn_1_126181' => 'lsa', 'Lsat_1_v5_gn_4_123041' => 'lsa', 'Lsat_1_v5_gn_4_133620' => 'lsa', 'Lsat_1_v5_gn_4_53221' => 'lsa', 'Lsat_1_v5_gn_4_71961' => 'lsa', 'Lsat_1_v5_gn_7_105241' => 'lsa', 'Lsat_1_v5_gn_7_21361' => 'lsa', 'Lsat_1_v5_gn_7_28860' => 'lsa', 'Lsat_1_v5_gn_7_31260' => 'lsa', 'Lsat_1_v5_gn_8_52801' => 'lsa', 'Manes.02G191400' => 'mes', 'Manes.03G110100' => 'mes', 'Manes.04G071100' => 'mes', 'Manes.05G100500' => 'mes', 'Manes.05G164700' => 'mes', 'Manes.15G087000' => 'mes', 'Manes.15G121500' => 'mes', 'Manes.16G028300' => 'mes', 'Manes.17G046100' => 'mes', 'Manes.17G069800' => 'mes', 'Manes.18G100500' => 'mes', 'Mapoly0002s0109' => 'mpo', 'Mapoly0024s0007' => 'mpo', 'Mapoly0089s0032' => 'mpo', 'MBI04_g42241_MAGBIO' => 'mbi', 'MBI05_g11988_MAGBIO' => 'mbi', 'MBI05_g35452_MAGBIO' => 'mbi', 'MBI07_g30179_MAGBIO' => 'mbi', 'MBI07_g35859_MAGBIO' => 'mbi', 'MBI07_g35860_MAGBIO' => 'mbi', 'MBI07_g37166_MAGBIO' => 'mbi', 'MBI08_g18172_MAGBIO' => 'mbi', 'MBI09_g08441_MAGBIO' => 'mbi', 'MBI13_g01676_MAGBIO' => 'mbi', 'MBI14_g42955_MAGBIO' => 'mbi', 'MBI16_g13161_MAGBIO' => 'mbi', 'MBI17_g27204_MAGBIO' => 'mbi', 'MBI19_g21595_MAGBIO' => 'mbi', 'MD00G1148400' => 'mdo', 'MD02G1301200' => 'mdo', 'MD03G1227800' => 'mdo', 'MD05G1041100' => 'mdo', 'MD05G1124800' => 'mdo', 'MD05G1284000' => 'mdo', 'MD05G1338800' => 'mdo', 'MD05G1338900' => 'mdo', 'MD07G1022800' => 'mdo', 'MD10G1047500' => 'mdo', 'MD10G1127500' => 'mdo', 'MD10G1262300' => 'mdo', 'MD10G1293800' => 'mdo', 'MD16G1074300' => 'mdo', 'Medtr1g021670' => 'mtr', 'Medtr1g096320' => 'mtr', 'Medtr2g013690' => 'mtr', 'Medtr2g019450' => 'mtr', 'Medtr2g085170' => 'mtr', 'Medtr4g088785' => 'mtr', 'Medtr8g055930' => 'mtr', 'Medtr8g085850' => 'mtr', 'MELO3C002605.2' => 'cme', 'MELO3C003891.2' => 'cme', 'MELO3C004012.2' => 'cme', 'MELO3C007134.2' => 'cme', 'MELO3C008118.2' => 'cme', 'MELO3C016700.2' => 'cme', 'MELO3C024127.2' => 'cme', 'MELO3C033361.2' => 'cme', 'MELO3C033362.2' => 'cme', 'Migut.C00430' => 'egut', 'Migut.C01246' => 'egut', 'Migut.E00101' => 'egut', 'Migut.H01486' => 'egut', 'Migut.H01939' => 'egut', 'Migut.K00360' => 'egut', 'Migut.M00910' => 'egut', 'Migut.M01139' => 'egut', 'Migut.N02677' => 'egut', 'MSTRG.13252' => 'ama', 'MSTRG.14701' => 'ama', 'MSTRG.1521' => 'ama', 'MSTRG.15884' => 'ama', 'MSTRG.16242' => 'ama', 'MSTRG.22285' => 'ama', 'MSTRG.22444' => 'ama', 'MSTRG.2349' => 'ama', 'MSTRG.26308' => 'ama', 'MSTRG.28296' => 'ama', 'MSTRG.9895' => 'ama', 'Nitab4.5_0000110g0060' => 'nta', 'Nitab4.5_0000420g0130' => 'nta', 'Nitab4.5_0000422g0030' => 'nta', 'Nitab4.5_0000560g0180' => 'nta', 'Nitab4.5_0000703g0100' => 'nta', 'Nitab4.5_0000786g0200' => 'nta', 'Nitab4.5_0001336g0020' => 'nta', 'Nitab4.5_0001796g0030' => 'nta', 'Nitab4.5_0003348g0060' => 'nta', 'Nitab4.5_0003698g0040' => 'nta', 'Nitab4.5_0003942g0090' => 'nta', 'Nitab4.5_0004775g0070' => 'nta', 'Nitab4.5_0004864g0030' => 'nta', 'Nitab4.5_0005615g0020' => 'nta', 'Nitab4.5_0009288g0030' => 'nta', 'Nitab4.5_0009341g0010' => 'nta', 'Nitab4.5_0009535g0010' => 'nta', 'Nn1g03995' => 'nnu', 'Nn1g04100' => 'nnu', 'Nn1g06530' => 'nnu', 'Nn3g16404' => 'nnu', 'Nn3g17212' => 'nnu', 'Nn3g20776' => 'nnu', 'Nn3g21923' => 'nnu', 'Nn5g27737' => 'nnu', 'Nn5g29461' => 'nnu', 'Nn7g38355' => 'nnu', 'Nn8g39873' => 'nnu', 'Oeu000548.2' => 'oeu', 'Oeu004672.1' => 'oeu', 'Oeu015605.2' => 'oeu', 'Oeu016092.1' => 'oeu', 'Oeu017879.3' => 'oeu', 'Oeu024910.1' => 'oeu', 'Oeu028965.1' => 'oeu', 'Oeu031269.1' => 'oeu', 'Oeu031270.1' => 'oeu', 'Oeu032535.1' => 'oeu', 'Oeu034151.1' => 'oeu', 'Oeu034152.1' => 'oeu', 'Oeu034588.2' => 'oeu', 'Oeu050846.1' => 'oeu', 'Oeu050849.2' => 'oeu', 'Oeu051063.2' => 'oeu', 'Oeu052368.1' => 'oeu', 'Oeu052370.1' => 'oeu', 'Os01g0210400' => 'osa', 'Os01g0304300' => 'osa', 'Os01g0749100' => 'osa', 'Os02g0745800' => 'osa', 'Os03g0769050' => 'osa', 'Os05g0531500' => 'osa', 'Os06g0724300' => 'osa', 'Os11g0198100' => 'osa', 'Peaxi162Scf00069g01425' => 'pax', 'Peaxi162Scf00280g00811' => 'pax', 'Peaxi162Scf00310g00615' => 'pax', 'Peaxi162Scf00362g00542' => 'pax', 'Peaxi162Scf00461g00310' => 'pax', 'Peaxi162Scf00530g00118' => 'pax', 'Peaxi162Scf00541g00057' => 'pax', 'Peaxi162Scf00661g00017' => 'pax', 'Peaxi162Scf00926g00027' => 'pax', 'Peaxi162Scf01064g00263' => 'pax', 'Peaxi162Scf01211g00135' => 'pax', 'PGR004G2336' => 'pgr', 'PGR042G0327' => 'pgr', 'PGR042G1957' => 'pgr', 'PGR042G2003' => 'pgr', 'PGR042G3929' => 'pgr', 'PGR083G1137' => 'pgr', 'PGR083G1364' => 'pgr', 'PGSC0003DMG400003381' => 'stu', 'PGSC0003DMG400003417' => 'stu', 'PGSC0003DMG400008981' => 'stu', 'PGSC0003DMG400012417' => 'stu', 'PGSC0003DMG400012823' => 'stu', 'PGSC0003DMG400016885' => 'stu', 'PGSC0003DMG400022812' => 'stu', 'PGSC0003DMG400029726' => 'stu', 'PGSC0003DMG401009243' => 'stu', 'PGSC0003DMG401031505' => 'stu', 'PGSC0003DMG402031505' => 'stu', 'Phvul.001G017600' => 'pvu', 'Phvul.002G193500' => 'pvu', 'Phvul.002G228900' => 'pvu', 'Phvul.002G236800' => 'pvu', 'Phvul.003G049500' => 'pvu', 'Phvul.005G072000' => 'pvu', 'Phvul.006G164800' => 'pvu', 'Phvul.006G185100' => 'pvu', 'Phvul.007G090000' => 'pvu', 'Potri.001G399800' => 'ptr', 'Potri.002G149900' => 'ptr', 'Potri.004G044100' => 'ptr', 'Potri.004G177600' => 'ptr', 'Potri.009G138000' => 'ptr', 'Potri.010G094000' => 'ptr', 'Potri.011G053000' => 'ptr', 'Potri.011G119300' => 'ptr', 'Potri.013G113700' => 'ptr', 'Potri.018G107800' => 'ptr', 'Potri.019G084100' => 'ptr', 'Pp3c14_23720' => 'ppa', 'Pp3c16_6340' => 'ppa', 'Pp3c23_13420' => 'ppa', 'Pp3c24_2740' => 'ppa', 'Pp3c25_860' => 'ppa', 'Pp3c8_21750' => 'ppa', 'Prupe.1G273000' => 'ppe', 'Prupe.1G273700' => 'ppe', 'Prupe.1G274100' => 'ppe', 'Prupe.2G023300' => 'ppe', 'Prupe.4G048000' => 'ppe', 'Prupe.4G080400' => 'ppe', 'Prupe.4G181200' => 'ppe', 'Prupe.8G056900' => 'ppe', 'Prupe.8G168700' => 'ppe', 'Psat1g189080' => 'psa', 'Psat1g204760' => 'psa', 'Psat4g175560' => 'psa', 'Psat4g177720' => 'psa', 'Psat5g244240' => 'psa', 'Psat6g010720' => 'psa', 'Psat6g187200' => 'psa', 'Psat7g072040' => 'psa', 'PSO017G3501' => 'pso', 'PSO063G2148' => 'pso', 'PSO063G5608' => 'pso', 'PSO210G6392' => 'pso', 'PSO541G2319' => 'pso', 'PSO541G2836' => 'pso', 'PSO541G4012' => 'pso', 'PSO541G6253' => 'pso', 'PSO675G0580' => 'pso', 'PSO675G0856' => 'pso', 'PSO675G5635' => 'pso', 'PSO675G9157' => 'pso', 'PSO832G1660' => 'pso', 'PSO832G1969' => 'pso', 'QL02p007186' => 'qlo', 'QL02p033904' => 'qlo', 'QL03p064391' => 'qlo', 'QL05p040593' => 'qlo', 'QL05p058242' => 'qlo', 'QL08p021825' => 'qlo', 'QL11p004981' => 'qlo', 'RcHm_v2.0_Chr1g0318301' => 'rch', 'RcHm_v2.0_Chr4g0418501' => 'rch', 'RcHm_v2.0_Chr4g0439971' => 'rch', 'RcHm_v2.0_Chr5g0008541' => 'rch', 'RcHm_v2.0_Chr5g0014101' => 'rch', 'RcHm_v2.0_Chr5g0014131' => 'rch', 'RcHm_v2.0_Chr5g0033621' => 'rch', 'RcHm_v2.0_Chr6g0272041' => 'rch', 'RcHm_v2.0_Chr6g0278831' => 'rch', 'Rhsim02G0130400' => 'rsi', 'Rhsim02G0171100' => 'rsi', 'Rhsim05G0053000' => 'rsi', 'Rhsim05G0053100' => 'rsi', 'Rhsim06G0096500' => 'rsi', 'Rhsim06G0096600' => 'rsi', 'Rhsim06G0199100' => 'rsi', 'Rhsim12G0062300' => 'rsi', 'Rhsim12G0062800' => 'rsi', 'Sabra02G0118600' => 'sbr', 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'Solyc03g079860.2' => 'sly', 'Solyc04g079770.3' => 'sly', 'Solyc05g007430.4' => 'sly', 'Solyc07g063150.3' => 'sly', 'Solyc08g016620.3' => 'sly', 'Solyc09g057590.3' => 'sly', 'Solyc09g057600.1' => 'sly', 'Solyc10g009050.3' => 'sly', 'Solyc11g017420.2' => 'sly', 'Sopen01g053810' => 'spe', 'Sopen02g023040' => 'spe', 'Sopen03g002440' => 'spe', 'Sopen04g033350' => 'spe', 'Sopen05g003310' => 'spe', 'Sopen07g004050' => 'spe', 'Sopen07g031340' => 'spe', 'Sopen08g006990' => 'spe', 'Sopen10g004830' => 'spe', 'Sopen11g009370' => 'spe', 'Sp1g24450' => 'spa', 'Sp1g29670' => 'spa', 'Sp1g39600' => 'spa', 'Sp2g11080' => 'spa', 'Sp2g13970' => 'spa', 'Sp4g16130' => 'spa', 'Sp6g13080' => 'spa', 'Sp7g37270' => 'spa', 'TAR371G0065' => 'tar', 'TAR376G0340' => 'tar', 'TAR376G0435' => 'tar', 'TAR381G0002' => 'tar', 'TAR381G1236' => 'tar', 'TAR624G0055' => 'tar', 'TAR624G0324' => 'tar', 'TAR624G0696' => 'tar', 'TAR624G0906' => 'tar', 'TAR625G0107' => 'tar', 'TAR626G0015' => 'tar', 'TAR626G1356' => 'tar', 'TAR627G0888' => 'tar', 'TAR628G0399' => 'tar', 'TAR628G1327' => 'tar', 'TAR629G2831' => 'tar', 'TAR629G2874' => 'tar', 'TAR633G1432' => 'tar', 'TAR633G2771' => 'tar', 'THA.LOC104803394' => 'tha', 'THA.LOC104805153' => 'tha', 'THA.LOC104806784' => 'tha', 'THA.LOC104810473' => 'tha', 'THA.LOC104813100' => 'tha', 'THA.LOC104814215' => 'tha', 'THA.LOC104815554' => 'tha', 'THA.LOC104820544' => 'tha', 'THA.LOC104824754' => 'tha', 'THA.LOC104827717' => 'tha', 'Thecc.02G031400' => 'tca', 'Thecc.02G055900' => 'tca', 'Thecc.02G350800' => 'tca', 'Thecc.06G150900' => 'tca', 'Thecc.06G186600' => 'tca', 'Thecc.07G089600' => 'tca', 'Thecc.08G020400' => 'tca', 'Thecc.08G182100' => 'tca', 'Thhalv10000873m.g' => 'esa', 'Thhalv10004185m.g' => 'esa', 'Thhalv10006981m.g' => 'esa', 'Thhalv10007204m.g' => 'esa', 'Thhalv10011374m.g' => 'esa', 'Thhalv10013482m.g' => 'esa', 'Thhalv10017801m.g' => 'esa', 'Thhalv10024983m.g' => 'esa', 'TPR.G12072' => 'tpr', 'TPR.G15769' => 'tpr', 'TPR.G16504' => 'tpr', 'TPR.G16506' => 'tpr', 'TPR.G24345' => 'tpr', 'TPR.G26666' => 'tpr', 'TPR.G27320' => 'tpr', 'TPR.G31819' => 'tpr', 'TPR.G38879' => 'tpr', 'TPR.G39015' => 'tpr', 'TPR.G8819' => 'tpr', 'TWI09G0924' => 'twi', 'TWI12G0811' => 'twi', 'TWI12G1294' => 'twi', 'TWI31G0150' => 'twi', 'TWI36G1262' => 'twi', 'TWI38G1287' => 'twi', 'TWI38G1633' => 'twi', 'TWI38G1982' => 'twi', 'TWI39G0116' => 'twi', 'TWI60G1011' => 'twi', 'TWI63G0171' => 'twi', 'TWI73G0839' => 'twi', 'TWI79G1511' => 'twi', 'unitig_0.g915' => 'ugi', 'unitig_0.g916' => 'ugi', 'unitig_21.g20219' => 'ugi', 'unitig_21.g20416' => 'ugi', 'unitig_578.g16132' => 'ugi', 'unitig_578.g16718' => 'ugi', 'unitig_62.g23481' => 'ugi', 'unitig_744.g24535' => 'ugi', 'unitig_749.g13525' => 'ugi', 'vmacro01248' => 'vma', 'vmacro02290' => 'vma', 'vmacro10946' => 'vma', 'vmacro11865' => 'vma', 'vmacro12493' => 'vma', 'vmacro17322' => 'vma', 'vmacro21599' => 'vma', 'vmacro23041' => 'vma', 'VMungo0251G0004' => 'vmu', 'VMungo0251G2639' => 'vmu', 'VMungo0251G2967' => 'vmu', 'VMungo0540G0864' => 'vmu', 'VMungo0540G1569' => 'vmu', 'VMungo0647G0317' => 'vmu', 'VMungo0720G1373' => 'vmu', 'VMungo0720G1508' => 'vmu', 'VMungo1080G0485' => 'vmu', 'VMungo1215G3177' => 'vmu', 'Zm00001eb112600' => 'zma', 'Zm00001eb120220' => 'zma', 'Zm00001eb153240' => 'zma', 'Zm00001eb168880' => 'zma', 'Zm00001eb213920' => 'zma', 'Zm00001eb228280' => 'zma', 'Zm00001eb254580' => 'zma', 'Zm00001eb272180' => 'zma', 'Zm00001eb293190' => 'zma', 'Zm00001eb322930' => 'zma', 'Zm00001eb353360' => 'zma', 'Zm00001eb353390' => 'zma', 'Zm00001eb353430' => 'zma', 'Zm00001eb353440' => 'zma', 'Zm00001eb353780' => 'zma' ), 'gf_id' => 'HOM05D000499', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000499' ), 'data_identifier' => 'HOM05D000499', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000499', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1066', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p29780' => 'bna', 'A02p33180' => 'bna', 'A03p16470' => 'bna', 'A03p66010' => 'bna', 'A04p25970' => 'bna', 'A06p01270' => 'bna', 'A06p46080' => 'bna', 'A07p11400' => 'bna', 'A08p01840' => 'bna', 'A08p08230' => 'bna', 'A08p25740' => 'bna', 'A09p32070' => 'bna', 'A09p37830' => 'bna', 'A09p42840' => 'bna', 'A09p42850' => 'bna', 'Aa31LG10G2060' => 'aar', 'Aa31LG2G7410' => 'aar', 'Aa31LG6G10200' => 'aar', 'Aa31LG6G16680' => 'aar', 'Aa31LG6G8470' => 'aar', 'Aa31LG9G12730' => 'aar', 'Aa31LG9G13680' => 'aar', 'Aa31LG9G14920' => 'aar', 'Aa31LG9G6650' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4977' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5467' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3254' => 'aag', 'Actinidia02578' => 'ach', 'Actinidia07693' => 'ach', 'Actinidia08413' => 'ach', 'Actinidia08414' => 'ach', 'Actinidia15289' => 'ach', 'Actinidia19871' => 'ach', 'Actinidia21475' => 'ach', 'Actinidia22576' => 'ach', 'Actinidia28327' => 'ach', 'Actinidia32491' => 'ach', 'Actinidia39463' => 'ach', 'Actinidia39571' => 'ach', 'Ah.01g013750' => 'amhyb', 'Ah.01g023210' => 'amhyb', 'Ah.04g164850' => 'amhyb', 'Ah.05g178060' => 'amhyb', 'Ah.07g204270' => 'amhyb', 'Ah.07g208480' => 'amhyb', 'Ah.09g237410' => 'amhyb', 'Ah.14g089460' => 'amhyb', 'AL1G41790' => 'aly', 'AL1G49050' => 'aly', 'AL1G53810' => 'aly', 'AL1G61400' => 'aly', 'AL4G18580' => 'aly', 'AL5G12510' => 'aly', 'AL5G12540' => 'aly', 'AL6G43230' => 'aly', 'AL7G10370' => 'aly', 'AL7G19250' => 'aly', 'AL8G12240' => 'aly', 'AL8G18540' => 'aly', 'Aqoxy1G02409' => 'aox', 'Aqoxy2G03993' => 'aox', 'Aqoxy3G03357' => 'aox', 'Aqoxy4G00785' => 'aox', 'Aqoxy5G02598' => 'aox', 'Aqoxy6G00132' => 'aox', 'Aqoxy7G01776' => 'aox', 'Aqoxy7G02316' => 'aox', 'Aqoxy7G03973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.12AFKW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B8730' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27IQR1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3F75VG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3RE0GA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41TCQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.527VTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FIR39' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5W8UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DA38EV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ63HS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H1I32C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HC27T5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4M8AP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7N3CZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9UVDZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LS1NQA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT1D4B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SKC4TM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCFV76' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF9Q1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQWD9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1ZM88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WE07RT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YCK7VH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJE6Q6' => 'arhy', 'AT1G28240' => 'ath', 'AT1G34550' => 'ath', 'AT1G53040' => 'ath', 'AT2G02910' => 'ath', 'AT4G09630' => 'ath', 'AT4G38500' => 'ath', 'AT5G42660' => 'ath', 'AT5G46220' => 'ath', 'ATR0152G026' => 'atr', 'ATR0564G343' => 'atr', 'ATR0706G151' => 'atr', 'ATR0733G207' => 'atr', 'ATR0751G234' => 'atr', 'ATR0807G048' => 'atr', 'ATR1091G084' => 'atr', 'Atru.chr10.1229' => 'acertr', 'Atru.chr10.1230' => 'acertr', 'Atru.chr10.1874' => 'acertr', 'Atru.chr11.1808' => 'acertr', 'Atru.chr13.1795' => 'acertr', 'Atru.chr13.570' => 'acertr', 'Atru.chr2.2608' => 'acertr', 'Atru.chr2.2609' => 'acertr', 'Atru.chr5.3428' => 'acertr', 'Atru.chr8.1171' => 'acertr', 'AUR62004651' => 'cqu', 'AUR62008675' => 'cqu', 'AUR62010014' => 'cqu', 'AUR62013004' => 'cqu', 'AUR62014825' => 'cqu', 'AUR62015015' => 'cqu', 'AUR62015151' => 'cqu', 'AUR62017020' => 'cqu', 'AUR62019422' => 'cqu', 'AUR62023570' => 'cqu', 'AUR62025571' => 'cqu', 'AUR62029098' => 'cqu', 'AUR62033863' => 'cqu', 'AUR62034296' => 'cqu', 'AUR62040075' => 'cqu', 'BcaB02g07334' => 'bca', 'BcaB02g10575' => 'bca', 'BcaB03g12119' => 'bca', 'BcaB03g12120' => 'bca', 'BcaB03g13945' => 'bca', 'BcaB04g17123' => 'bca', 'BcaB04g17867' => 'bca', 'BcaB04g19839' => 'bca', 'BcaB07g30317' => 'bca', 'BcaB07g32432' => 'bca', 'BcaB07g33362' => 'bca', 'BcaB08g36611' => 'bca', 'BcaC01g00028' => 'bca', 'BcaC01g01356' => 'bca', 'BcaC01g02034' => 'bca', 'BcaC01g06051' => 'bca', 'BcaC03g16839' => 'bca', 'BcaC03g17176' => 'bca', 'BcaC05g26829' => 'bca', 'BcaC06g31490' => 'bca', 'BcaC06g35344' => 'bca', 'BcaC06g36570' => 'bca', 'BcaC07g37537' => 'bca', 'BcaC08g43491' => 'bca', 'BcaC08g43773' => 'bca', 'BcaNung00234' => 'bca', 'BcaNung01982' => 'bca', 'BcaNung03707' => 'bca', 'BcaNung06454' => 'bca', 'BolC2t10762H' => 'bol', 'BolC2t11191H' => 'bol', 'BolC3t14322H' => 'bol', 'BolC3t19747H' => 'bol', 'BolC3t21425H' => 'bol', 'BolC4t27800H' => 'bol', 'BolC5t31423H' => 'bol', 'BolC6t35951H' => 'bol', 'BolC6t36282H' => 'bol', 'BolC7t40678H' => 'bol', 'BolC7t40679H' => 'bol', 'BolC7t42222H' => 'bol', 'BolC7t43492H' => 'bol', 'BolC7t46785H' => 'bol', 'BolC8t47853H' => 'bol', 'BolC9t56805H' => 'bol', 'BraA02t08000Z' => 'bra', 'BraA02t08341Z' => 'bra', 'BraA03t10936Z' => 'bra', 'BraA03t15657Z' => 'bra', 'BraA04t18100Z' => 'bra', 'BraA05t20523Z' => 'bra', 'BraA06t23353Z' => 'bra', 'BraA06t27473Z' => 'bra', 'BraA06t27769Z' => 'bra', 'BraA07t28928Z' => 'bra', 'BraA08t32236Z' => 'bra', 'BraA08t32841Z' => 'bra', 'BraA08t34524Z' => 'bra', 'BraA09t38742Z' => 'bra', 'BraA09t39295Z' => 'bra', 'C02p47180' => 'bna', 'C02p50990' => 'bna', 'C03p19360' => 'bna', 'C03p74950' => 'bna', 'C03p91000' => 'bna', 'C04p63260' => 'bna', 'C05p27050' => 'bna', 'C06p08750' => 'bna', 'C06p11490' => 'bna', 'C07p02820' => 'bna', 'C07p17180' => 'bna', 'C07p29440' => 'bna', 'C07p63730' => 'bna', 'C09p39260' => 'bna', 'CAN.G1164.34' => 'can', 'CAN.G1164.39' => 'can', 'CAN.G1530.3' => 'can', 'CAN.G162.61' => 'can', 'CAN.G176.6' => 'can', 'CAN.G289.49' => 'can', 'CAN.G370.21' => 'can', 'CAN.G370.22' => 'can', 'CAN.G371.117' => 'can', 'CAN.G58.37' => 'can', 'CAN.G588.98' => 'can', 'CANSAT21G2266' => 'cansat', 'CANSAT25G2799' => 'cansat', 'CANSAT35G0862' => 'cansat', 'CANSAT35G1704' => 'cansat', 'CANSAT35G1760' => 'cansat', 'CANSAT56G3971' => 'cansat', 'CANSAT56G4116' => 'cansat', 'CANSAT80G1259' => 'cansat', 'CARHR027730' => 'chi', 'CARHR033880' => 'chi', 'CARHR043270' => 'chi', 'CARHR145330' => 'chi', 'CARHR145340' => 'chi', 'CARHR175570' => 'chi', 'CARHR181570' => 'chi', 'CARHR258470' => 'chi', 'CARHR260490' => 'chi', 'CARHR294220' => 'chi', 'Carub.0001s2668' => 'cru', 'Carub.0001s3257' => 'cru', 'Carub.0001s4220' => 'cru', 'Carub.0005s0179' => 'cru', 'Carub.0006s2807' => 'cru', 'Carub.0007s0039' => 'cru', 'Carub.0008s0169' => 'cru', 'Carub.0008s0636' => 'cru', 'Ca_00338_v3' => 'car', 'Ca_00542_v3' => 'car', 'Ca_01844_v3' => 'car', 'Ca_10611_v3' => 'car', 'Ca_13326_v3' => 'car', 'Ca_17944_v3' => 'car', 'Ca_18546_v3' => 'car', 'Ca_24219_v3' => 'car', 'Ca_29972_v3' => 'car', 'CBR_g3681' => 'cbr', 'CBR_g40021' => 'cbr', 'Cc01_g08140' => 'ccan', 'Cc02_g13410' => 'ccan', 'Cc02_g37480' => 'ccan', 'Cc05_g12030' => 'ccan', 'Cc09_g03370' => 'ccan', 'Cc09_g10300' => 'ccan', 'Cc10_g03530' => 'ccan', 'Cc10_g11380' => 'ccan', 'CDE01G0176' => 'cde', 'CDE02G0675' => 'cde', 'CDE02G0942' => 'cde', 'CDE02G1153' => 'cde', 'CDE02G4177' => 'cde', 'CDE04G2117' => 'cde', 'CDE04G2736' => 'cde', 'CDE08G1161' => 'cde', 'CDE09G1238' => 'cde', 'Cfa000467' => 'cfa', 'Cfa000947' => 'cfa', 'Cfa004969' => 'cfa', 'Cfa005284' => 'cfa', 'Cfa008993' => 'cfa', 'Cfa018187' => 'cfa', 'Cfa018454' => 'cfa', 'Cfa020585' => 'cfa', 'Ciclev10000424m.g' => 'ccl', 'Ciclev10003605m.g' => 'ccl', 'Ciclev10007828m.g' => 'ccl', 'Ciclev10014620m.g' => 'ccl', 'Ciclev10015169m.g' => 'ccl', 'Ciclev10018291m.g' => 'ccl', 'Ciclev10028256m.g' => 'ccl', 'Ciclev10033822m.g' => 'ccl', 'CiPaw.05G060300' => 'cil', 'CiPaw.05G085000' => 'cil', 'CiPaw.06G083700' => 'cil', 'CiPaw.06G120300' => 'cil', 'CiPaw.09G060500' => 'cil', 'CiPaw.09G123800' => 'cil', 'CiPaw.11G169700' => 'cil', 'CiPaw.12G118300' => 'cil', 'CiPaw.15G071000' => 'cil', 'CiPaw.15G081900' => 'cil', 'ClCG01G024610' => 'cla', 'ClCG03G006070' => 'cla', 'ClCG05G019250' => 'cla', 'ClCG09G009500' => 'cla', 'ClCG11G008200' => 'cla', 'ClCG11G018080' => 'cla', 'COL.COLO4_17373' => 'col', 'COL.COLO4_22994' => 'col', 'COL.COLO4_26389' => 'col', 'COL.COLO4_27170' => 'col', 'COL.COLO4_31074' => 'col', 'COL.COLO4_31465' => 'col', 'COL.COLO4_36438' => 'col', 'COL.COLO4_36439' => 'col', 'Cpa.g.c38781' => 'cpa', 'Cpa.g.sc128.12' => 'cpa', 'Cpa.g.sc166.7' => 'cpa', 'Cpa.g.sc166.8' => 'cpa', 'Cpa.g.sc20.111' => 'cpa', 'Cpa.g.sc27.31' => 'cpa', 'Cpa.g.sc64.36' => 'cpa', 'Cpa.g.sc64.37' => 'cpa', 'Cpa.g.sc66.49' => 'cpa', 'Cpa.g.sc80.64' => 'cpa', 'CsaV3_1G012320' => 'csa', 'CsaV3_2G008480' => 'csa', 'CsaV3_2G033450' => 'csa', 'CsaV3_3G044830' => 'csa', 'CsaV3_4G033710' => 'csa', 'CsaV3_6G051730' => 'csa', 'CsaV3_7G025350' => 'csa', 'CSS0001067' => 'camsi', 'CSS0005996' => 'camsi', 'CSS0006590' => 'camsi', 'CSS0009673' => 'camsi', 'CSS0010201' => 'camsi', 'CSS0010549' => 'camsi', 'CSS0011364' => 'camsi', 'CSS0014473' => 'camsi', 'CSS0014961' => 'camsi', 'CSS0020191' => 'camsi', 'CSS0021165' => 'camsi', 'CSS0022306' => 'camsi', 'CSS0030591' => 'camsi', 'CSS0030696' => 'camsi', 'CSS0032653' => 'camsi', 'CSS0037487' => 'camsi', 'CSS0041102' => 'camsi', 'CSS0041261' => 'camsi', 'CSS0046246' => 'camsi', 'CSS0049256' => 'camsi', 'DCAR_004075' => 'dca', 'DCAR_011538' => 'dca', 'DCAR_019553' => 'dca', 'DCAR_020952' => 'dca', 'DCAR_021739' => 'dca', 'DCAR_027407' => 'dca', 'DCAR_027913' => 'dca', 'DCAR_028066' => 'dca', 'Dinv05899' => 'din', 'Dinv07563' => 'din', 'Dinv08010' => 'din', 'Dinv14125' => 'din', 'Dinv20172' => 'din', 'Dinv30743' => 'din', 'Dinv31229' => 'din', 'Dinv34162' => 'din', 'Dinv36028' => 'din', 'Dinv39368' => 'din', 'Dinv40565' => 'din', 'Dinv41706' => 'din', 'Duzib052G0089' => 'dzi', 'Duzib116G0641' => 'dzi', 'Duzib132G0069' => 'dzi', 'Duzib132G1219' => 'dzi', 'Duzib147G0278' => 'dzi', 'Duzib160G0480' => 'dzi', 'Duzib170G0661' => 'dzi', 'Duzib177G0591' => 'dzi', 'Duzib187G1353' => 'dzi', 'Duzib192G0858' => 'dzi', 'Duzib192G0883' => 'dzi', 'Duzib213G0506' => 'dzi', 'Duzib235G0289' => 'dzi', 'Duzib251G0422' => 'dzi', 'ECA232G3898' => 'eca', 'ECA233G5950' => 'eca', 'ECA234G1699' => 'eca', 'ECA234G2421' => 'eca', 'ECA236G0426' => 'eca', 'ECA236G4331' => 'eca', 'ECA248G2573' => 'eca', 'EL10Ac1g00077' => 'bvu', 'EL10Ac1g01746' => 'bvu', 'EL10Ac2g03464' => 'bvu', 'EL10Ac4g08176' => 'bvu', 'EL10Ac7g17521' => 'bvu', 'EL10Ac8g20386' => 'bvu', 'EL10Ac9g21343' => 'bvu', 'EL10Ac9g22688' => 'bvu', 'Eucgr.B03434' => 'egr', 'Eucgr.D00618' => 'egr', 'Eucgr.E02395' => 'egr', 'Eucgr.F01129' => 'egr', 'Eucgr.F02622' => 'egr', 'Eucgr.F04207' => 'egr', 'FAN01G0570' => 'fan', 'FAN03G3351' => 'fan', 'FAN06G3702' => 'fan', 'FAN07G2149' => 'fan', 'FAN10G3758' => 'fan', 'FAN11G1170' => 'fan', 'FAN11G2050' => 'fan', 'FAN11G2724' => 'fan', 'FAN12G1700' => 'fan', 'FAN12G2028' => 'fan', 'FAN15G1160' => 'fan', 'FAN15G3063' => 'fan', 'FAN16G2540' => 'fan', 'FAN16G3077' => 'fan', 'FAN16G3624' => 'fan', 'FAN17G0221' => 'fan', 'FAN20G2492' => 'fan', 'FAN20G2905' => 'fan', 'FAN21G0548' => 'fan', 'FAN21G1300' => 'fan', 'FAN22G0077' => 'fan', 'FAN22G1315' => 'fan', 'FAN24G1280' => 'fan', 'FAN24G1445' => 'fan', 'FAN24G3527' => 'fan', 'FAN25G0464' => 'fan', 'FAN25G2885' => 'fan', 'FAN25G3270' => 'fan', 'FAN27G1101' => 'fan', 'FAN27G2846' => 'fan', 'FAN27G3524' => 'fan', 'FvH4_2g11770' => 'fve', 'FvH4_2g15630' => 'fve', 'FvH4_3g05570' => 'fve', 'FvH4_3g09110' => 'fve', 'FvH4_3g19940' => 'fve', 'FvH4_4g04821' => 'fve', 'FvH4_4g31480' => 'fve', 'FvH4_7g01740' => 'fve', 'Glyma.05G130400' => 'gma', 'Glyma.05G156400' => 'gma', 'Glyma.07G197000' => 'gma', 'Glyma.08G085151' => 'gma', 'Glyma.08G114500' => 'gma', 'Glyma.08G300400' => 'gma', 'Glyma.10G215800' => 'gma', 'Glyma.12G224400' => 'gma', 'Glyma.13G179300' => 'gma', 'Glyma.13G218151' => 'gma', 'Glyma.13G238800' => 'gma', 'Glyma.13G276900' => 'gma', 'Glyma.14G078200' => 'gma', 'Glyma.15G074500' => 'gma', 'Glyma.15G094100' => 'gma', 'Glyma.17G247200' => 'gma', 'Glyma.18G120100' => 'gma', 'Glyma.20G176000' => 'gma', 'Gohir.A01G063600' => 'ghi', 'Gohir.A01G170301' => 'ghi', 'Gohir.A02G060500' => 'ghi', 'Gohir.A05G133850' => 'ghi', 'Gohir.A05G161400' => 'ghi', 'Gohir.A06G012900' => 'ghi', 'Gohir.A06G035901' => 'ghi', 'Gohir.A06G127100' => 'ghi', 'Gohir.A06G210500' => 'ghi', 'Gohir.A08G008650' => 'ghi', 'Gohir.A09G072700' => 'ghi', 'Gohir.A09G088301' => 'ghi', 'Gohir.A10G040600' => 'ghi', 'Gohir.A12G036300' => 'ghi', 'Gohir.A12G143350' => 'ghi', 'Gohir.A12G165500' => 'ghi', 'Gohir.A13G145700' => 'ghi', 'Gohir.D01G050000' => 'ghi', 'Gohir.D01G051366' => 'ghi', 'Gohir.D01G161350' => 'ghi', 'Gohir.D02G065900' => 'ghi', 'Gohir.D05G164200' => 'ghi', 'Gohir.D05G355500' => 'ghi', 'Gohir.D06G010400' => 'ghi', 'Gohir.D06G111250' => 'ghi', 'Gohir.D06G132000' => 'ghi', 'Gohir.D06G210500' => 'ghi', 'Gohir.D07G165675' => 'ghi', 'Gohir.D08G062240' => 'ghi', 'Gohir.D08G086101' => 'ghi', 'Gohir.D08G138060' => 'ghi', 'Gohir.D09G072300' => 'ghi', 'Gohir.D10G041400' => 'ghi', 'Gohir.D11G191020' => 'ghi', 'Gohir.D11G212066' => 'ghi', 'Gohir.D12G036300' => 'ghi', 'Gohir.D12G168600' => 'ghi', 'Gohir.D13G150600' => 'ghi', 'Gorai.001G057300' => 'gra', 'Gorai.002G069900' => 'gra', 'Gorai.002G200000' => 'gra', 'Gorai.003G067600' => 'gra', 'Gorai.005G074800' => 'gra', 'Gorai.006G087300' => 'gra', 'Gorai.008G037500' => 'gra', 'Gorai.008G181400' => 'gra', 'Gorai.009G169400' => 'gra', 'Gorai.009G387900' => 'gra', 'Gorai.010G013300' => 'gra', 'Gorai.010G153800' => 'gra', 'Gorai.010G255800' => 'gra', 'Gorai.011G043700' => 'gra', 'Gorai.011G198900' => 'gra', 'Gorai.013G168400' => 'gra', 'GSVIVG01005212001' => 'vvi', 'GSVIVG01006163001' => 'vvi', 'GSVIVG01009625001' => 'vvi', 'GSVIVG01014338001' => 'vvi', 'GSVIVG01020005001' => 'vvi', 'GSVIVG01021450001' => 'vvi', 'GSVIVG01023975001' => 'vvi', 'GSVIVG01034490001' => 'vvi', 'HanXRQChr04g0112071' => 'han', 'HanXRQChr05g0131151' => 'han', 'HanXRQChr09g0262371' => 'han', 'HanXRQChr09g0268401' => 'han', 'HanXRQChr10g0279241' => 'han', 'HanXRQChr10g0297961' => 'han', 'HanXRQChr11g0326231' => 'han', 'HanXRQChr11g0328471' => 'han', 'HanXRQChr16g0507941' => 'han', 'HanXRQChr17g0560211' => 'han', 'Haze_02108' => 'cav', 'Haze_02428' => 'cav', 'Haze_05593' => 'cav', 'Haze_06448' => 'cav', 'Haze_09427' => 'cav', 'Haze_12022' => 'cav', 'Haze_17612' => 'cav', 'Haze_17928' => 'cav', 'Hma1.2p1_0032F.1_g019250' => 'hma', 'Hma1.2p1_0163F.1_g072690' => 'hma', 'Hma1.2p1_0265F.1_g106710' => 'hma', 'Hma1.2p1_0286F.1_g113970' => 'hma', 'Hma1.2p1_0363F.1_g136640' => 'hma', 'Hma1.2p1_0584F.1_g183470' => 'hma', 'Hma1.2p1_0885F.1_g232570' => 'hma', 'HPP92_006022' => 'vpl', 'HPP92_007320' => 'vpl', 'HPP92_011521' => 'vpl', 'HPP92_019387' => 'vpl', 'HPP92_024038' => 'vpl', 'Hund05891' => 'sun', 'Hund06450' => 'sun', 'Hund12053' => 'sun', 'Hund16800' => 'sun', 'Hund21222' => 'sun', 'Hund22896' => 'sun', 'Hund23746' => 'sun', 'Hund27083' => 'sun', 'Lalb_Chr02g0141831' => 'lal', 'Lalb_Chr02g0141841' => 'lal', 'Lalb_Chr05g0220411' => 'lal', 'Lalb_Chr06g0162081' => 'lal', 'Lalb_Chr09g0327651' => 'lal', 'Lalb_Chr13g0295051' => 'lal', 'Lalb_Chr15g0086801' => 'lal', 'Lalb_Chr16g0383781' => 'lal', 'Lalb_Chr16g0383791' => 'lal', 'Lalb_Chr18g0055441' => 'lal', 'Lalb_Chr18g0059611' => 'lal', 'Lalb_Chr20g0109661' => 'lal', 'Lalb_Chr20g0109831' => 'lal', 'Lalb_Chr20g0121871' => 'lal', 'Lalb_Chr22g0355361' => 'lal', 'Lalb_Chr25g0286371' => 'lal', 'Lj1A1187G43' => 'lonja', 'Lj1A1205T50' => 'lonja', 'Lj1A800G33' => 'lonja', 'Lj1C1187T7' => 'lonja', 'Lj1C843T11' => 'lonja', 'Lj1g0010940' => 'lja', 'Lj2A288T69' => 'lonja', 'Lj3g0024276' => 'lja', 'Lj4A47T76' => 'lonja', 'Lj4g0005805' => 'lja', 'Lj4g0006097' => 'lja', 'Lj4g0008528' => 'lja', 'Lj4g0024907' => 'lja', 'Lj5g0012472' => 'lja', 'Lj5g0018648' => 'lja', 'Lj6C789G1' => 'lonja', 'Lj6g0004000' => 'lja', 'Lj7A292G67' => 'lonja', 'Lj7A292T64' => 'lonja', 'Lj9A400T58' => 'lonja', 'Lsat_1_v5_gn_1_126181' => 'lsa', 'Lsat_1_v5_gn_4_123041' => 'lsa', 'Lsat_1_v5_gn_4_133620' => 'lsa', 'Lsat_1_v5_gn_4_53221' => 'lsa', 'Lsat_1_v5_gn_4_71961' => 'lsa', 'Lsat_1_v5_gn_7_105241' => 'lsa', 'Lsat_1_v5_gn_7_21361' => 'lsa', 'Lsat_1_v5_gn_7_28860' => 'lsa', 'Lsat_1_v5_gn_7_31260' => 'lsa', 'Lsat_1_v5_gn_8_52801' => 'lsa', 'Manes.02G191400' => 'mes', 'Manes.03G110100' => 'mes', 'Manes.04G071100' => 'mes', 'Manes.05G100500' => 'mes', 'Manes.05G164700' => 'mes', 'Manes.15G087000' => 'mes', 'Manes.15G121500' => 'mes', 'Manes.16G028300' => 'mes', 'Manes.17G046100' => 'mes', 'Manes.17G069800' => 'mes', 'Manes.18G100500' => 'mes', 'Mapoly0002s0109' => 'mpo', 'Mapoly0024s0007' => 'mpo', 'Mapoly0089s0032' => 'mpo', 'MBI04_g42241_MAGBIO' => 'mbi', 'MBI05_g11988_MAGBIO' => 'mbi', 'MBI05_g35452_MAGBIO' => 'mbi', 'MBI07_g30179_MAGBIO' => 'mbi', 'MBI07_g35859_MAGBIO' => 'mbi', 'MBI07_g35860_MAGBIO' => 'mbi', 'MBI07_g37166_MAGBIO' => 'mbi', 'MBI08_g18172_MAGBIO' => 'mbi', 'MBI09_g08441_MAGBIO' => 'mbi', 'MBI13_g01676_MAGBIO' => 'mbi', 'MBI14_g42955_MAGBIO' => 'mbi', 'MBI16_g13161_MAGBIO' => 'mbi', 'MBI17_g27204_MAGBIO' => 'mbi', 'MBI19_g21595_MAGBIO' => 'mbi', 'MD00G1148400' => 'mdo', 'MD02G1301200' => 'mdo', 'MD03G1227800' => 'mdo', 'MD05G1041100' => 'mdo', 'MD05G1124800' => 'mdo', 'MD05G1284000' => 'mdo', 'MD05G1338800' => 'mdo', 'MD05G1338900' => 'mdo', 'MD07G1022800' => 'mdo', 'MD10G1047500' => 'mdo', 'MD10G1127500' => 'mdo', 'MD10G1262300' => 'mdo', 'MD10G1293800' => 'mdo', 'MD16G1074300' => 'mdo', 'Medtr1g021670' => 'mtr', 'Medtr1g096320' => 'mtr', 'Medtr2g013690' => 'mtr', 'Medtr2g019450' => 'mtr', 'Medtr2g085170' => 'mtr', 'Medtr4g088785' => 'mtr', 'Medtr8g055930' => 'mtr', 'Medtr8g085850' => 'mtr', 'MELO3C002605.2' => 'cme', 'MELO3C003891.2' => 'cme', 'MELO3C004012.2' => 'cme', 'MELO3C007134.2' => 'cme', 'MELO3C008118.2' => 'cme', 'MELO3C016700.2' => 'cme', 'MELO3C024127.2' => 'cme', 'MELO3C033361.2' => 'cme', 'MELO3C033362.2' => 'cme', 'Migut.C00430' => 'egut', 'Migut.C01246' => 'egut', 'Migut.E00101' => 'egut', 'Migut.H01486' => 'egut', 'Migut.H01939' => 'egut', 'Migut.K00360' => 'egut', 'Migut.M00910' => 'egut', 'Migut.M01139' => 'egut', 'Migut.N02677' => 'egut', 'MSTRG.13252' => 'ama', 'MSTRG.14701' => 'ama', 'MSTRG.1521' => 'ama', 'MSTRG.15884' => 'ama', 'MSTRG.16242' => 'ama', 'MSTRG.22285' => 'ama', 'MSTRG.22444' => 'ama', 'MSTRG.2349' => 'ama', 'MSTRG.26308' => 'ama', 'MSTRG.28296' => 'ama', 'MSTRG.9895' => 'ama', 'Nitab4.5_0000110g0060' => 'nta', 'Nitab4.5_0000420g0130' => 'nta', 'Nitab4.5_0000422g0030' => 'nta', 'Nitab4.5_0000560g0180' => 'nta', 'Nitab4.5_0000703g0100' => 'nta', 'Nitab4.5_0000786g0200' => 'nta', 'Nitab4.5_0001336g0020' => 'nta', 'Nitab4.5_0001796g0030' => 'nta', 'Nitab4.5_0003348g0060' => 'nta', 'Nitab4.5_0003698g0040' => 'nta', 'Nitab4.5_0003942g0090' => 'nta', 'Nitab4.5_0004775g0070' => 'nta', 'Nitab4.5_0004864g0030' => 'nta', 'Nitab4.5_0005615g0020' => 'nta', 'Nitab4.5_0009288g0030' => 'nta', 'Nitab4.5_0009341g0010' => 'nta', 'Nitab4.5_0009535g0010' => 'nta', 'Nn1g03995' => 'nnu', 'Nn1g04100' => 'nnu', 'Nn1g06530' => 'nnu', 'Nn3g16404' => 'nnu', 'Nn3g17212' => 'nnu', 'Nn3g20776' => 'nnu', 'Nn3g21923' => 'nnu', 'Nn5g27737' => 'nnu', 'Nn5g29461' => 'nnu', 'Nn7g38355' => 'nnu', 'Nn8g39873' => 'nnu', 'Oeu000548.2' => 'oeu', 'Oeu004672.1' => 'oeu', 'Oeu015605.2' => 'oeu', 'Oeu016092.1' => 'oeu', 'Oeu017879.3' => 'oeu', 'Oeu024910.1' => 'oeu', 'Oeu028965.1' => 'oeu', 'Oeu031269.1' => 'oeu', 'Oeu031270.1' => 'oeu', 'Oeu032535.1' => 'oeu', 'Oeu034151.1' => 'oeu', 'Oeu034152.1' => 'oeu', 'Oeu034588.2' => 'oeu', 'Oeu050846.1' => 'oeu', 'Oeu050849.2' => 'oeu', 'Oeu051063.2' => 'oeu', 'Oeu052368.1' => 'oeu', 'Oeu052370.1' => 'oeu', 'Os01g0210400' => 'osa', 'Os01g0304300' => 'osa', 'Os01g0749100' => 'osa', 'Os02g0745800' => 'osa', 'Os03g0769050' => 'osa', 'Os05g0531500' => 'osa', 'Os06g0724300' => 'osa', 'Os11g0198100' => 'osa', 'Peaxi162Scf00069g01425' => 'pax', 'Peaxi162Scf00280g00811' => 'pax', 'Peaxi162Scf00310g00615' => 'pax', 'Peaxi162Scf00362g00542' => 'pax', 'Peaxi162Scf00461g00310' => 'pax', 'Peaxi162Scf00530g00118' => 'pax', 'Peaxi162Scf00541g00057' => 'pax', 'Peaxi162Scf00661g00017' => 'pax', 'Peaxi162Scf00926g00027' => 'pax', 'Peaxi162Scf01064g00263' => 'pax', 'Peaxi162Scf01211g00135' => 'pax', 'PGR004G2336' => 'pgr', 'PGR042G0327' => 'pgr', 'PGR042G1957' => 'pgr', 'PGR042G2003' => 'pgr', 'PGR042G3929' => 'pgr', 'PGR083G1137' => 'pgr', 'PGR083G1364' => 'pgr', 'PGSC0003DMG400003381' => 'stu', 'PGSC0003DMG400003417' => 'stu', 'PGSC0003DMG400008981' => 'stu', 'PGSC0003DMG400012417' => 'stu', 'PGSC0003DMG400012823' => 'stu', 'PGSC0003DMG400016885' => 'stu', 'PGSC0003DMG400022812' => 'stu', 'PGSC0003DMG400029726' => 'stu', 'PGSC0003DMG401009243' => 'stu', 'PGSC0003DMG401031505' => 'stu', 'PGSC0003DMG402031505' => 'stu', 'Phvul.001G017600' => 'pvu', 'Phvul.002G193500' => 'pvu', 'Phvul.002G228900' => 'pvu', 'Phvul.002G236800' => 'pvu', 'Phvul.003G049500' => 'pvu', 'Phvul.005G072000' => 'pvu', 'Phvul.006G164800' => 'pvu', 'Phvul.006G185100' => 'pvu', 'Phvul.007G090000' => 'pvu', 'Potri.001G399800' => 'ptr', 'Potri.002G149900' => 'ptr', 'Potri.004G044100' => 'ptr', 'Potri.004G177600' => 'ptr', 'Potri.009G138000' => 'ptr', 'Potri.010G094000' => 'ptr', 'Potri.011G053000' => 'ptr', 'Potri.011G119300' => 'ptr', 'Potri.013G113700' => 'ptr', 'Potri.018G107800' => 'ptr', 'Potri.019G084100' => 'ptr', 'Pp3c14_23720' => 'ppa', 'Pp3c16_6340' => 'ppa', 'Pp3c23_13420' => 'ppa', 'Pp3c24_2740' => 'ppa', 'Pp3c25_860' => 'ppa', 'Pp3c8_21750' => 'ppa', 'Prupe.1G273000' => 'ppe', 'Prupe.1G273700' => 'ppe', 'Prupe.1G274100' => 'ppe', 'Prupe.2G023300' => 'ppe', 'Prupe.4G048000' => 'ppe', 'Prupe.4G080400' => 'ppe', 'Prupe.4G181200' => 'ppe', 'Prupe.8G056900' => 'ppe', 'Prupe.8G168700' => 'ppe', 'Psat1g189080' => 'psa', 'Psat1g204760' => 'psa', 'Psat4g175560' => 'psa', 'Psat4g177720' => 'psa', 'Psat5g244240' => 'psa', 'Psat6g010720' => 'psa', 'Psat6g187200' => 'psa', 'Psat7g072040' => 'psa', 'PSO017G3501' => 'pso', 'PSO063G2148' => 'pso', 'PSO063G5608' => 'pso', 'PSO210G6392' => 'pso', 'PSO541G2319' => 'pso', 'PSO541G2836' => 'pso', 'PSO541G4012' => 'pso', 'PSO541G6253' => 'pso', 'PSO675G0580' => 'pso', 'PSO675G0856' => 'pso', 'PSO675G5635' => 'pso', 'PSO675G9157' => 'pso', 'PSO832G1660' => 'pso', 'PSO832G1969' => 'pso', 'QL02p007186' => 'qlo', 'QL02p033904' => 'qlo', 'QL03p064391' => 'qlo', 'QL05p040593' => 'qlo', 'QL05p058242' => 'qlo', 'QL08p021825' => 'qlo', 'QL11p004981' => 'qlo', 'RcHm_v2.0_Chr1g0318301' => 'rch', 'RcHm_v2.0_Chr4g0418501' => 'rch', 'RcHm_v2.0_Chr4g0439971' => 'rch', 'RcHm_v2.0_Chr5g0008541' => 'rch', 'RcHm_v2.0_Chr5g0014101' => 'rch', 'RcHm_v2.0_Chr5g0014131' => 'rch', 'RcHm_v2.0_Chr5g0033621' => 'rch', 'RcHm_v2.0_Chr6g0272041' => 'rch', 'RcHm_v2.0_Chr6g0278831' => 'rch', 'Rhsim02G0130400' => 'rsi', 'Rhsim02G0171100' => 'rsi', 'Rhsim05G0053000' => 'rsi', 'Rhsim05G0053100' => 'rsi', 'Rhsim06G0096500' => 'rsi', 'Rhsim06G0096600' => 'rsi', 'Rhsim06G0199100' => 'rsi', 'Rhsim12G0062300' => 'rsi', 'Rhsim12G0062800' => 'rsi', 'Sabra02G0118600' => 'sbr', 'Sabra04G0027300' => 'sbr', 'Sabra04G0119500' => 'sbr', 'Sabra08G0112500' => 'sbr', 'Sabra11G0036800' => 'sbr', 'Sabra11G0103800' => 'sbr', 'Sabra13G0096300' => 'sbr', 'Sabra16G0262300' => 'sbr', 'Sabra18G0091700' => 'sbr', 'Sabra19G0095400' => 'sbr', 'SalBow6G3080' => 'sbo', 'SalBow7G1157' => 'sbo', 'SalBow7G2123' => 'sbo', 'SalBow7G2285' => 'sbo', 'SalBow7G3537' => 'sbo', 'SalBow8G2947' => 'sbo', 'SalBow8G4463' => 'sbo', 'SalBow8G5466' => 'sbo', 'Sc01g0001750' => 'sci', 'Sc02g0006640' => 'sci', 'Sc02g0006670' => 'sci', 'Sc04g0008220' => 'sci', 'Sc05g0006190' => 'sci', 'Sc08g0002760' => 'sci', 'Sc17g0006170' => 'sci', 'Sc22g0002050' => 'sci', 'Sc23g0001190' => 'sci', 'Sc24g0000980' => 'sci', 'Sed0006245' => 'sed', 'Sed0007543' => 'sed', 'Sed0009411' => 'sed', 'Sed0010765' => 'sed', 'Sed0012944' => 'sed', 'Sed0014682' => 'sed', 'Sed0016174' => 'sed', 'Sed0016796' => 'sed', 'Sed0020317' => 'sed', 'Sed0021467' => 'sed', 'SEGI_01316' => 'sgi', 'SEGI_03374' => 'sgi', 'SEGI_16265' => 'sgi', 'SEGI_18569' => 'sgi', 'SEGI_20351' => 'sgi', 'SEGI_26395' => 'sgi', 'SEGI_29469' => 'sgi', 'SEGI_34771' => 'sgi', 'SEGI_36769' => 'sgi', 'SEGI_37139' => 'sgi', 'SGA_v2.0_scaffold100G29687' => 'sas', 'SGA_v2.0_scaffold118G32472' => 'sas', 'SGA_v2.0_scaffold14G07051' => 'sas', 'SGA_v2.0_scaffold183G39845' => 'sas', 'SGA_v2.0_scaffold1G00174' => 'sas', 'SGA_v2.0_scaffold22G09714' => 'sas', 'SGA_v2.0_scaffold333G48992' => 'sas', 'SGA_v2.0_scaffold46G17491' => 'sas', 'SGA_v2.0_scaffold49G18294' => 'sas', 'SGA_v2.0_scaffold63G21658' => 'sas', 'SHI01741' => 'shi', 'SHI05771' => 'shi', 'SHI18077' => 'shi', 'SHI20525' => 'shi', 'SHI20527' => 'shi', 'SHI20528' => 'shi', 'SMO172G0185' => 'smo', 'SMO198G0020' => 'smo', 'SMO351G0006' => 'smo', 'SMO356G0118' => 'smo', 'SMO358G0296' => 'smo', 'SMO367G0079' => 'smo', 'SMO367G1277' => 'smo', 'Solyc01g014220.3' => 'sly', 'Solyc01g111770.2' => 'sly', 'Solyc02g078180.3' => 'sly', 'Solyc03g006430.3' => 'sly', 'Solyc03g006456.1' => 'sly', 'Solyc03g079860.2' => 'sly', 'Solyc04g079770.3' => 'sly', 'Solyc05g007430.4' => 'sly', 'Solyc07g063150.3' => 'sly', 'Solyc08g016620.3' => 'sly', 'Solyc09g057590.3' => 'sly', 'Solyc09g057600.1' => 'sly', 'Solyc10g009050.3' => 'sly', 'Solyc11g017420.2' => 'sly', 'Sopen01g053810' => 'spe', 'Sopen02g023040' => 'spe', 'Sopen03g002440' => 'spe', 'Sopen04g033350' => 'spe', 'Sopen05g003310' => 'spe', 'Sopen07g004050' => 'spe', 'Sopen07g031340' => 'spe', 'Sopen08g006990' => 'spe', 'Sopen10g004830' => 'spe', 'Sopen11g009370' => 'spe', 'Sp1g24450' => 'spa', 'Sp1g29670' => 'spa', 'Sp1g39600' => 'spa', 'Sp2g11080' => 'spa', 'Sp2g13970' => 'spa', 'Sp4g16130' => 'spa', 'Sp6g13080' => 'spa', 'Sp7g37270' => 'spa', 'TAR371G0065' => 'tar', 'TAR376G0340' => 'tar', 'TAR376G0435' => 'tar', 'TAR381G0002' => 'tar', 'TAR381G1236' => 'tar', 'TAR624G0055' => 'tar', 'TAR624G0324' => 'tar', 'TAR624G0696' => 'tar', 'TAR624G0906' => 'tar', 'TAR625G0107' => 'tar', 'TAR626G0015' => 'tar', 'TAR626G1356' => 'tar', 'TAR627G0888' => 'tar', 'TAR628G0399' => 'tar', 'TAR628G1327' => 'tar', 'TAR629G2831' => 'tar', 'TAR629G2874' => 'tar', 'TAR633G1432' => 'tar', 'TAR633G2771' => 'tar', 'THA.LOC104803394' => 'tha', 'THA.LOC104805153' => 'tha', 'THA.LOC104806784' => 'tha', 'THA.LOC104810473' => 'tha', 'THA.LOC104813100' => 'tha', 'THA.LOC104814215' => 'tha', 'THA.LOC104815554' => 'tha', 'THA.LOC104820544' => 'tha', 'THA.LOC104824754' => 'tha', 'THA.LOC104827717' => 'tha', 'Thecc.02G031400' => 'tca', 'Thecc.02G055900' => 'tca', 'Thecc.02G350800' => 'tca', 'Thecc.06G150900' => 'tca', 'Thecc.06G186600' => 'tca', 'Thecc.07G089600' => 'tca', 'Thecc.08G020400' => 'tca', 'Thecc.08G182100' => 'tca', 'Thhalv10000873m.g' => 'esa', 'Thhalv10004185m.g' => 'esa', 'Thhalv10006981m.g' => 'esa', 'Thhalv10007204m.g' => 'esa', 'Thhalv10011374m.g' => 'esa', 'Thhalv10013482m.g' => 'esa', 'Thhalv10017801m.g' => 'esa', 'Thhalv10024983m.g' => 'esa', 'TPR.G12072' => 'tpr', 'TPR.G15769' => 'tpr', 'TPR.G16504' => 'tpr', 'TPR.G16506' => 'tpr', 'TPR.G24345' => 'tpr', 'TPR.G26666' => 'tpr', 'TPR.G27320' => 'tpr', 'TPR.G31819' => 'tpr', 'TPR.G38879' => 'tpr', 'TPR.G39015' => 'tpr', 'TPR.G8819' => 'tpr', 'TWI09G0924' => 'twi', 'TWI12G0811' => 'twi', 'TWI12G1294' => 'twi', 'TWI31G0150' => 'twi', 'TWI36G1262' => 'twi', 'TWI38G1287' => 'twi', 'TWI38G1633' => 'twi', 'TWI38G1982' => 'twi', 'TWI39G0116' => 'twi', 'TWI60G1011' => 'twi', 'TWI63G0171' => 'twi', 'TWI73G0839' => 'twi', 'TWI79G1511' => 'twi', 'unitig_0.g915' => 'ugi', 'unitig_0.g916' => 'ugi', 'unitig_21.g20219' => 'ugi', 'unitig_21.g20416' => 'ugi', 'unitig_578.g16132' => 'ugi', 'unitig_578.g16718' => 'ugi', 'unitig_62.g23481' => 'ugi', 'unitig_744.g24535' => 'ugi', 'unitig_749.g13525' => 'ugi', 'vmacro01248' => 'vma', 'vmacro02290' => 'vma', 'vmacro10946' => 'vma', 'vmacro11865' => 'vma', 'vmacro12493' => 'vma', 'vmacro17322' => 'vma', 'vmacro21599' => 'vma', 'vmacro23041' => 'vma', 'VMungo0251G0004' => 'vmu', 'VMungo0251G2639' => 'vmu', 'VMungo0251G2967' => 'vmu', 'VMungo0540G0864' => 'vmu', 'VMungo0540G1569' => 'vmu', 'VMungo0647G0317' => 'vmu', 'VMungo0720G1373' => 'vmu', 'VMungo0720G1508' => 'vmu', 'VMungo1080G0485' => 'vmu', 'VMungo1215G3177' => 'vmu', 'Zm00001eb112600' => 'zma', 'Zm00001eb120220' => 'zma', 'Zm00001eb153240' => 'zma', 'Zm00001eb168880' => 'zma', 'Zm00001eb213920' => 'zma', 'Zm00001eb228280' => 'zma', 'Zm00001eb254580' => 'zma', 'Zm00001eb272180' => 'zma', 'Zm00001eb293190' => 'zma', 'Zm00001eb322930' => 'zma', 'Zm00001eb353360' => 'zma', 'Zm00001eb353390' => 'zma', 'Zm00001eb353430' => 'zma', 'Zm00001eb353440' => 'zma', 'Zm00001eb353780' => 'zma' ) $gf_id = 'HOM05D000499' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000499' ) $data_identifier = 'HOM05D000499' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 29, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 12, 'amhyb' => (int) 8, 'aly' => (int) 12, 'aox' => (int) 9, 'arhy' => (int) 26, 'ath' => (int) 8, 'atr' => (int) 7, 'acertr' => (int) 10, 'cqu' => (int) 15, 'bca' => (int) 29, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 11, 'cansat' => (int) 8, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 9, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 8, 'cpa' => (int) 10, 'csa' => (int) 7, 'camsi' => (int) 20, 'dca' => (int) 8, 'din' => (int) 12, 'dzi' => (int) 14, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 6, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 38, 'gra' => (int) 16, 'vvi' => (int) 8, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 5, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 11, 'lja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 11, 'mpo' => (int) 3, 'mbi' => (int) 14, 'mdo' => (int) 14, 'mtr' => (int) 8, 'cme' => (int) 9, 'egut' => (int) 9, 'ama' => (int) 11, 'nta' => (int) 17, 'nnu' => (int) 11, 'oeu' => (int) 18, 'osa' => (int) 8, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 6, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 9, 'rsi' => (int) 9, 'sbr' => (int) 10, 'sbo' => (int) 8, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 10, 'sas' => (int) 10, 'shi' => (int) 6, 'smo' => (int) 7, 'sly' => (int) 14, 'spe' => (int) 10, 'spa' => (int) 8, 'tar' => (int) 19, 'tha' => (int) 10, 'tca' => (int) 8, 'esa' => (int) 8, 'tpr' => (int) 11, 'twi' => (int) 13, 'ugi' => (int) 9, 'vma' => (int) 8, 'vmu' => (int) 10, 'zma' => (int) 15 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb353780' $species_info = array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ) $local_species = 'sly' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000499', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1066', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p29780' => 'bna', 'A02p33180' => 'bna', 'A03p16470' => 'bna', 'A03p66010' => 'bna', 'A04p25970' => 'bna', 'A06p01270' => 'bna', 'A06p46080' => 'bna', 'A07p11400' => 'bna', 'A08p01840' => 'bna', 'A08p08230' => 'bna', 'A08p25740' => 'bna', 'A09p32070' => 'bna', 'A09p37830' => 'bna', 'A09p42840' => 'bna', 'A09p42850' => 'bna', 'Aa31LG10G2060' => 'aar', 'Aa31LG2G7410' => 'aar', 'Aa31LG6G10200' => 'aar', 'Aa31LG6G16680' => 'aar', 'Aa31LG6G8470' => 'aar', 'Aa31LG9G12730' => 'aar', 'Aa31LG9G13680' => 'aar', 'Aa31LG9G14920' => 'aar', 'Aa31LG9G6650' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4977' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5467' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3254' => 'aag', 'Actinidia02578' => 'ach', 'Actinidia07693' => 'ach', 'Actinidia08413' => 'ach', 'Actinidia08414' => 'ach', 'Actinidia15289' => 'ach', 'Actinidia19871' => 'ach', 'Actinidia21475' => 'ach', 'Actinidia22576' => 'ach', 'Actinidia28327' => 'ach', 'Actinidia32491' => 'ach', 'Actinidia39463' => 'ach', 'Actinidia39571' => 'ach', 'Ah.01g013750' => 'amhyb', 'Ah.01g023210' => 'amhyb', 'Ah.04g164850' => 'amhyb', 'Ah.05g178060' => 'amhyb', 'Ah.07g204270' => 'amhyb', 'Ah.07g208480' => 'amhyb', 'Ah.09g237410' => 'amhyb', 'Ah.14g089460' => 'amhyb', 'AL1G41790' => 'aly', 'AL1G49050' => 'aly', 'AL1G53810' => 'aly', 'AL1G61400' => 'aly', 'AL4G18580' => 'aly', 'AL5G12510' => 'aly', 'AL5G12540' => 'aly', 'AL6G43230' => 'aly', 'AL7G10370' => 'aly', 'AL7G19250' => 'aly', 'AL8G12240' => 'aly', 'AL8G18540' => 'aly', 'Aqoxy1G02409' => 'aox', 'Aqoxy2G03993' => 'aox', 'Aqoxy3G03357' => 'aox', 'Aqoxy4G00785' => 'aox', 'Aqoxy5G02598' => 'aox', 'Aqoxy6G00132' => 'aox', 'Aqoxy7G01776' => 'aox', 'Aqoxy7G02316' => 'aox', 'Aqoxy7G03973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.12AFKW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B8730' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27IQR1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3F75VG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3RE0GA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41TCQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.527VTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FIR39' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5W8UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DA38EV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ63HS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H1I32C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HC27T5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4M8AP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7N3CZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9UVDZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LS1NQA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT1D4B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SKC4TM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCFV76' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF9Q1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQWD9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1ZM88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WE07RT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YCK7VH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJE6Q6' => 'arhy', 'AT1G28240' => 'ath', 'AT1G34550' => 'ath', 'AT1G53040' => 'ath', 'AT2G02910' => 'ath', 'AT4G09630' => 'ath', 'AT4G38500' => 'ath', 'AT5G42660' => 'ath', 'AT5G46220' => 'ath', 'ATR0152G026' => 'atr', 'ATR0564G343' => 'atr', 'ATR0706G151' => 'atr', 'ATR0733G207' => 'atr', 'ATR0751G234' => 'atr', 'ATR0807G048' => 'atr', 'ATR1091G084' => 'atr', 'Atru.chr10.1229' => 'acertr', 'Atru.chr10.1230' => 'acertr', 'Atru.chr10.1874' => 'acertr', 'Atru.chr11.1808' => 'acertr', 'Atru.chr13.1795' => 'acertr', 'Atru.chr13.570' => 'acertr', 'Atru.chr2.2608' => 'acertr', 'Atru.chr2.2609' => 'acertr', 'Atru.chr5.3428' => 'acertr', 'Atru.chr8.1171' => 'acertr', 'AUR62004651' => 'cqu', 'AUR62008675' => 'cqu', 'AUR62010014' => 'cqu', 'AUR62013004' => 'cqu', 'AUR62014825' => 'cqu', 'AUR62015015' => 'cqu', 'AUR62015151' => 'cqu', 'AUR62017020' => 'cqu', 'AUR62019422' => 'cqu', 'AUR62023570' => 'cqu', 'AUR62025571' => 'cqu', 'AUR62029098' => 'cqu', 'AUR62033863' => 'cqu', 'AUR62034296' => 'cqu', 'AUR62040075' => 'cqu', 'BcaB02g07334' => 'bca', 'BcaB02g10575' => 'bca', 'BcaB03g12119' => 'bca', 'BcaB03g12120' => 'bca', 'BcaB03g13945' => 'bca', 'BcaB04g17123' => 'bca', 'BcaB04g17867' => 'bca', 'BcaB04g19839' => 'bca', 'BcaB07g30317' => 'bca', 'BcaB07g32432' => 'bca', 'BcaB07g33362' => 'bca', 'BcaB08g36611' => 'bca', 'BcaC01g00028' => 'bca', 'BcaC01g01356' => 'bca', 'BcaC01g02034' => 'bca', 'BcaC01g06051' => 'bca', 'BcaC03g16839' => 'bca', 'BcaC03g17176' => 'bca', 'BcaC05g26829' => 'bca', 'BcaC06g31490' => 'bca', 'BcaC06g35344' => 'bca', 'BcaC06g36570' => 'bca', 'BcaC07g37537' => 'bca', 'BcaC08g43491' => 'bca', 'BcaC08g43773' => 'bca', 'BcaNung00234' => 'bca', 'BcaNung01982' => 'bca', 'BcaNung03707' => 'bca', 'BcaNung06454' => 'bca', 'BolC2t10762H' => 'bol', 'BolC2t11191H' => 'bol', 'BolC3t14322H' => 'bol', 'BolC3t19747H' => 'bol', 'BolC3t21425H' => 'bol', 'BolC4t27800H' => 'bol', 'BolC5t31423H' => 'bol', 'BolC6t35951H' => 'bol', 'BolC6t36282H' => 'bol', 'BolC7t40678H' => 'bol', 'BolC7t40679H' => 'bol', 'BolC7t42222H' => 'bol', 'BolC7t43492H' => 'bol', 'BolC7t46785H' => 'bol', 'BolC8t47853H' => 'bol', 'BolC9t56805H' => 'bol', 'BraA02t08000Z' => 'bra', 'BraA02t08341Z' => 'bra', 'BraA03t10936Z' => 'bra', 'BraA03t15657Z' => 'bra', 'BraA04t18100Z' => 'bra', 'BraA05t20523Z' => 'bra', 'BraA06t23353Z' => 'bra', 'BraA06t27473Z' => 'bra', 'BraA06t27769Z' => 'bra', 'BraA07t28928Z' => 'bra', 'BraA08t32236Z' => 'bra', 'BraA08t32841Z' => 'bra', 'BraA08t34524Z' => 'bra', 'BraA09t38742Z' => 'bra', 'BraA09t39295Z' => 'bra', 'C02p47180' => 'bna', 'C02p50990' => 'bna', 'C03p19360' => 'bna', 'C03p74950' => 'bna', 'C03p91000' => 'bna', 'C04p63260' => 'bna', 'C05p27050' => 'bna', 'C06p08750' => 'bna', 'C06p11490' => 'bna', 'C07p02820' => 'bna', 'C07p17180' => 'bna', 'C07p29440' => 'bna', 'C07p63730' => 'bna', 'C09p39260' => 'bna', 'CAN.G1164.34' => 'can', 'CAN.G1164.39' => 'can', 'CAN.G1530.3' => 'can', 'CAN.G162.61' => 'can', 'CAN.G176.6' => 'can', 'CAN.G289.49' => 'can', 'CAN.G370.21' => 'can', 'CAN.G370.22' => 'can', 'CAN.G371.117' => 'can', 'CAN.G58.37' => 'can', 'CAN.G588.98' => 'can', 'CANSAT21G2266' => 'cansat', 'CANSAT25G2799' => 'cansat', 'CANSAT35G0862' => 'cansat', 'CANSAT35G1704' => 'cansat', 'CANSAT35G1760' => 'cansat', 'CANSAT56G3971' => 'cansat', 'CANSAT56G4116' => 'cansat', 'CANSAT80G1259' => 'cansat', 'CARHR027730' => 'chi', 'CARHR033880' => 'chi', 'CARHR043270' => 'chi', 'CARHR145330' => 'chi', 'CARHR145340' => 'chi', 'CARHR175570' => 'chi', 'CARHR181570' => 'chi', 'CARHR258470' => 'chi', 'CARHR260490' => 'chi', 'CARHR294220' => 'chi', 'Carub.0001s2668' => 'cru', 'Carub.0001s3257' => 'cru', 'Carub.0001s4220' => 'cru', 'Carub.0005s0179' => 'cru', 'Carub.0006s2807' => 'cru', 'Carub.0007s0039' => 'cru', 'Carub.0008s0169' => 'cru', 'Carub.0008s0636' => 'cru', 'Ca_00338_v3' => 'car', 'Ca_00542_v3' => 'car', 'Ca_01844_v3' => 'car', 'Ca_10611_v3' => 'car', 'Ca_13326_v3' => 'car', 'Ca_17944_v3' => 'car', 'Ca_18546_v3' => 'car', 'Ca_24219_v3' => 'car', 'Ca_29972_v3' => 'car', 'CBR_g3681' => 'cbr', 'CBR_g40021' => 'cbr', 'Cc01_g08140' => 'ccan', 'Cc02_g13410' => 'ccan', 'Cc02_g37480' => 'ccan', 'Cc05_g12030' => 'ccan', 'Cc09_g03370' => 'ccan', 'Cc09_g10300' => 'ccan', 'Cc10_g03530' => 'ccan', 'Cc10_g11380' => 'ccan', 'CDE01G0176' => 'cde', 'CDE02G0675' => 'cde', 'CDE02G0942' => 'cde', 'CDE02G1153' => 'cde', 'CDE02G4177' => 'cde', 'CDE04G2117' => 'cde', 'CDE04G2736' => 'cde', 'CDE08G1161' => 'cde', 'CDE09G1238' => 'cde', 'Cfa000467' => 'cfa', 'Cfa000947' => 'cfa', 'Cfa004969' => 'cfa', 'Cfa005284' => 'cfa', 'Cfa008993' => 'cfa', 'Cfa018187' => 'cfa', 'Cfa018454' => 'cfa', 'Cfa020585' => 'cfa', 'Ciclev10000424m.g' => 'ccl', 'Ciclev10003605m.g' => 'ccl', 'Ciclev10007828m.g' => 'ccl', 'Ciclev10014620m.g' => 'ccl', 'Ciclev10015169m.g' => 'ccl', 'Ciclev10018291m.g' => 'ccl', 'Ciclev10028256m.g' => 'ccl', 'Ciclev10033822m.g' => 'ccl', 'CiPaw.05G060300' => 'cil', 'CiPaw.05G085000' => 'cil', 'CiPaw.06G083700' => 'cil', 'CiPaw.06G120300' => 'cil', 'CiPaw.09G060500' => 'cil', 'CiPaw.09G123800' => 'cil', 'CiPaw.11G169700' => 'cil', 'CiPaw.12G118300' => 'cil', 'CiPaw.15G071000' => 'cil', 'CiPaw.15G081900' => 'cil', 'ClCG01G024610' => 'cla', 'ClCG03G006070' => 'cla', 'ClCG05G019250' => 'cla', 'ClCG09G009500' => 'cla', 'ClCG11G008200' => 'cla', 'ClCG11G018080' => 'cla', 'COL.COLO4_17373' => 'col', 'COL.COLO4_22994' => 'col', 'COL.COLO4_26389' => 'col', 'COL.COLO4_27170' => 'col', 'COL.COLO4_31074' => 'col', 'COL.COLO4_31465' => 'col', 'COL.COLO4_36438' => 'col', 'COL.COLO4_36439' => 'col', 'Cpa.g.c38781' => 'cpa', 'Cpa.g.sc128.12' => 'cpa', 'Cpa.g.sc166.7' => 'cpa', 'Cpa.g.sc166.8' => 'cpa', 'Cpa.g.sc20.111' => 'cpa', 'Cpa.g.sc27.31' => 'cpa', 'Cpa.g.sc64.36' => 'cpa', 'Cpa.g.sc64.37' => 'cpa', 'Cpa.g.sc66.49' => 'cpa', 'Cpa.g.sc80.64' => 'cpa', 'CsaV3_1G012320' => 'csa', 'CsaV3_2G008480' => 'csa', 'CsaV3_2G033450' => 'csa', 'CsaV3_3G044830' => 'csa', 'CsaV3_4G033710' => 'csa', 'CsaV3_6G051730' => 'csa', 'CsaV3_7G025350' => 'csa', 'CSS0001067' => 'camsi', 'CSS0005996' => 'camsi', 'CSS0006590' => 'camsi', 'CSS0009673' => 'camsi', 'CSS0010201' => 'camsi', 'CSS0010549' => 'camsi', 'CSS0011364' => 'camsi', 'CSS0014473' => 'camsi', 'CSS0014961' => 'camsi', 'CSS0020191' => 'camsi', 'CSS0021165' => 'camsi', 'CSS0022306' => 'camsi', 'CSS0030591' => 'camsi', 'CSS0030696' => 'camsi', 'CSS0032653' => 'camsi', 'CSS0037487' => 'camsi', 'CSS0041102' => 'camsi', 'CSS0041261' => 'camsi', 'CSS0046246' => 'camsi', 'CSS0049256' => 'camsi', 'DCAR_004075' => 'dca', 'DCAR_011538' => 'dca', 'DCAR_019553' => 'dca', 'DCAR_020952' => 'dca', 'DCAR_021739' => 'dca', 'DCAR_027407' => 'dca', 'DCAR_027913' => 'dca', 'DCAR_028066' => 'dca', 'Dinv05899' => 'din', 'Dinv07563' => 'din', 'Dinv08010' => 'din', 'Dinv14125' => 'din', 'Dinv20172' => 'din', 'Dinv30743' => 'din', 'Dinv31229' => 'din', 'Dinv34162' => 'din', 'Dinv36028' => 'din', 'Dinv39368' => 'din', 'Dinv40565' => 'din', 'Dinv41706' => 'din', 'Duzib052G0089' => 'dzi', 'Duzib116G0641' => 'dzi', 'Duzib132G0069' => 'dzi', 'Duzib132G1219' => 'dzi', 'Duzib147G0278' => 'dzi', 'Duzib160G0480' => 'dzi', 'Duzib170G0661' => 'dzi', 'Duzib177G0591' => 'dzi', 'Duzib187G1353' => 'dzi', 'Duzib192G0858' => 'dzi', 'Duzib192G0883' => 'dzi', 'Duzib213G0506' => 'dzi', 'Duzib235G0289' => 'dzi', 'Duzib251G0422' => 'dzi', 'ECA232G3898' => 'eca', 'ECA233G5950' => 'eca', 'ECA234G1699' => 'eca', 'ECA234G2421' => 'eca', 'ECA236G0426' => 'eca', 'ECA236G4331' => 'eca', 'ECA248G2573' => 'eca', 'EL10Ac1g00077' => 'bvu', 'EL10Ac1g01746' => 'bvu', 'EL10Ac2g03464' => 'bvu', 'EL10Ac4g08176' => 'bvu', 'EL10Ac7g17521' => 'bvu', 'EL10Ac8g20386' => 'bvu', 'EL10Ac9g21343' => 'bvu', 'EL10Ac9g22688' => 'bvu', 'Eucgr.B03434' => 'egr', 'Eucgr.D00618' => 'egr', 'Eucgr.E02395' => 'egr', 'Eucgr.F01129' => 'egr', 'Eucgr.F02622' => 'egr', 'Eucgr.F04207' => 'egr', 'FAN01G0570' => 'fan', 'FAN03G3351' => 'fan', 'FAN06G3702' => 'fan', 'FAN07G2149' => 'fan', 'FAN10G3758' => 'fan', 'FAN11G1170' => 'fan', 'FAN11G2050' => 'fan', 'FAN11G2724' => 'fan', 'FAN12G1700' => 'fan', 'FAN12G2028' => 'fan', 'FAN15G1160' => 'fan', 'FAN15G3063' => 'fan', 'FAN16G2540' => 'fan', 'FAN16G3077' => 'fan', 'FAN16G3624' => 'fan', 'FAN17G0221' => 'fan', 'FAN20G2492' => 'fan', 'FAN20G2905' => 'fan', 'FAN21G0548' => 'fan', 'FAN21G1300' => 'fan', 'FAN22G0077' => 'fan', 'FAN22G1315' => 'fan', 'FAN24G1280' => 'fan', 'FAN24G1445' => 'fan', 'FAN24G3527' => 'fan', 'FAN25G0464' => 'fan', 'FAN25G2885' => 'fan', 'FAN25G3270' => 'fan', 'FAN27G1101' => 'fan', 'FAN27G2846' => 'fan', 'FAN27G3524' => 'fan', 'FvH4_2g11770' => 'fve', 'FvH4_2g15630' => 'fve', 'FvH4_3g05570' => 'fve', 'FvH4_3g09110' => 'fve', 'FvH4_3g19940' => 'fve', 'FvH4_4g04821' => 'fve', 'FvH4_4g31480' => 'fve', 'FvH4_7g01740' => 'fve', 'Glyma.05G130400' => 'gma', 'Glyma.05G156400' => 'gma', 'Glyma.07G197000' => 'gma', 'Glyma.08G085151' => 'gma', 'Glyma.08G114500' => 'gma', 'Glyma.08G300400' => 'gma', 'Glyma.10G215800' => 'gma', 'Glyma.12G224400' => 'gma', 'Glyma.13G179300' => 'gma', 'Glyma.13G218151' => 'gma', 'Glyma.13G238800' => 'gma', 'Glyma.13G276900' => 'gma', 'Glyma.14G078200' => 'gma', 'Glyma.15G074500' => 'gma', 'Glyma.15G094100' => 'gma', 'Glyma.17G247200' => 'gma', 'Glyma.18G120100' => 'gma', 'Glyma.20G176000' => 'gma', 'Gohir.A01G063600' => 'ghi', 'Gohir.A01G170301' => 'ghi', 'Gohir.A02G060500' => 'ghi', 'Gohir.A05G133850' => 'ghi', 'Gohir.A05G161400' => 'ghi', 'Gohir.A06G012900' => 'ghi', 'Gohir.A06G035901' => 'ghi', 'Gohir.A06G127100' => 'ghi', 'Gohir.A06G210500' => 'ghi', 'Gohir.A08G008650' => 'ghi', 'Gohir.A09G072700' => 'ghi', 'Gohir.A09G088301' => 'ghi', 'Gohir.A10G040600' => 'ghi', 'Gohir.A12G036300' => 'ghi', 'Gohir.A12G143350' => 'ghi', 'Gohir.A12G165500' => 'ghi', 'Gohir.A13G145700' => 'ghi', 'Gohir.D01G050000' => 'ghi', 'Gohir.D01G051366' => 'ghi', 'Gohir.D01G161350' => 'ghi', 'Gohir.D02G065900' => 'ghi', 'Gohir.D05G164200' => 'ghi', 'Gohir.D05G355500' => 'ghi', 'Gohir.D06G010400' => 'ghi', 'Gohir.D06G111250' => 'ghi', 'Gohir.D06G132000' => 'ghi', 'Gohir.D06G210500' => 'ghi', 'Gohir.D07G165675' => 'ghi', 'Gohir.D08G062240' => 'ghi', 'Gohir.D08G086101' => 'ghi', 'Gohir.D08G138060' => 'ghi', 'Gohir.D09G072300' => 'ghi', 'Gohir.D10G041400' => 'ghi', 'Gohir.D11G191020' => 'ghi', 'Gohir.D11G212066' => 'ghi', 'Gohir.D12G036300' => 'ghi', 'Gohir.D12G168600' => 'ghi', 'Gohir.D13G150600' => 'ghi', 'Gorai.001G057300' => 'gra', 'Gorai.002G069900' => 'gra', 'Gorai.002G200000' => 'gra', 'Gorai.003G067600' => 'gra', 'Gorai.005G074800' => 'gra', 'Gorai.006G087300' => 'gra', 'Gorai.008G037500' => 'gra', 'Gorai.008G181400' => 'gra', 'Gorai.009G169400' => 'gra', 'Gorai.009G387900' => 'gra', 'Gorai.010G013300' => 'gra', 'Gorai.010G153800' => 'gra', 'Gorai.010G255800' => 'gra', 'Gorai.011G043700' => 'gra', 'Gorai.011G198900' => 'gra', 'Gorai.013G168400' => 'gra', 'GSVIVG01005212001' => 'vvi', 'GSVIVG01006163001' => 'vvi', 'GSVIVG01009625001' => 'vvi', 'GSVIVG01014338001' => 'vvi', 'GSVIVG01020005001' => 'vvi', 'GSVIVG01021450001' => 'vvi', 'GSVIVG01023975001' => 'vvi', 'GSVIVG01034490001' => 'vvi', 'HanXRQChr04g0112071' => 'han', 'HanXRQChr05g0131151' => 'han', 'HanXRQChr09g0262371' => 'han', 'HanXRQChr09g0268401' => 'han', 'HanXRQChr10g0279241' => 'han', 'HanXRQChr10g0297961' => 'han', 'HanXRQChr11g0326231' => 'han', 'HanXRQChr11g0328471' => 'han', 'HanXRQChr16g0507941' => 'han', 'HanXRQChr17g0560211' => 'han', 'Haze_02108' => 'cav', 'Haze_02428' => 'cav', 'Haze_05593' => 'cav', 'Haze_06448' => 'cav', 'Haze_09427' => 'cav', 'Haze_12022' => 'cav', 'Haze_17612' => 'cav', 'Haze_17928' => 'cav', 'Hma1.2p1_0032F.1_g019250' => 'hma', 'Hma1.2p1_0163F.1_g072690' => 'hma', 'Hma1.2p1_0265F.1_g106710' => 'hma', 'Hma1.2p1_0286F.1_g113970' => 'hma', 'Hma1.2p1_0363F.1_g136640' => 'hma', 'Hma1.2p1_0584F.1_g183470' => 'hma', 'Hma1.2p1_0885F.1_g232570' => 'hma', 'HPP92_006022' => 'vpl', 'HPP92_007320' => 'vpl', 'HPP92_011521' => 'vpl', 'HPP92_019387' => 'vpl', 'HPP92_024038' => 'vpl', 'Hund05891' => 'sun', 'Hund06450' => 'sun', 'Hund12053' => 'sun', 'Hund16800' => 'sun', 'Hund21222' => 'sun', 'Hund22896' => 'sun', 'Hund23746' => 'sun', 'Hund27083' => 'sun', 'Lalb_Chr02g0141831' => 'lal', 'Lalb_Chr02g0141841' => 'lal', 'Lalb_Chr05g0220411' => 'lal', 'Lalb_Chr06g0162081' => 'lal', 'Lalb_Chr09g0327651' => 'lal', 'Lalb_Chr13g0295051' => 'lal', 'Lalb_Chr15g0086801' => 'lal', 'Lalb_Chr16g0383781' => 'lal', 'Lalb_Chr16g0383791' => 'lal', 'Lalb_Chr18g0055441' => 'lal', 'Lalb_Chr18g0059611' => 'lal', 'Lalb_Chr20g0109661' => 'lal', 'Lalb_Chr20g0109831' => 'lal', 'Lalb_Chr20g0121871' => 'lal', 'Lalb_Chr22g0355361' => 'lal', 'Lalb_Chr25g0286371' => 'lal', 'Lj1A1187G43' => 'lonja', 'Lj1A1205T50' => 'lonja', 'Lj1A800G33' => 'lonja', 'Lj1C1187T7' => 'lonja', 'Lj1C843T11' => 'lonja', 'Lj1g0010940' => 'lja', 'Lj2A288T69' => 'lonja', 'Lj3g0024276' => 'lja', 'Lj4A47T76' => 'lonja', 'Lj4g0005805' => 'lja', 'Lj4g0006097' => 'lja', 'Lj4g0008528' => 'lja', 'Lj4g0024907' => 'lja', 'Lj5g0012472' => 'lja', 'Lj5g0018648' => 'lja', 'Lj6C789G1' => 'lonja', 'Lj6g0004000' => 'lja', 'Lj7A292G67' => 'lonja', 'Lj7A292T64' => 'lonja', 'Lj9A400T58' => 'lonja', 'Lsat_1_v5_gn_1_126181' => 'lsa', 'Lsat_1_v5_gn_4_123041' => 'lsa', 'Lsat_1_v5_gn_4_133620' => 'lsa', 'Lsat_1_v5_gn_4_53221' => 'lsa', 'Lsat_1_v5_gn_4_71961' => 'lsa', 'Lsat_1_v5_gn_7_105241' => 'lsa', 'Lsat_1_v5_gn_7_21361' => 'lsa', 'Lsat_1_v5_gn_7_28860' => 'lsa', 'Lsat_1_v5_gn_7_31260' => 'lsa', 'Lsat_1_v5_gn_8_52801' => 'lsa', 'Manes.02G191400' => 'mes', 'Manes.03G110100' => 'mes', 'Manes.04G071100' => 'mes', 'Manes.05G100500' => 'mes', 'Manes.05G164700' => 'mes', 'Manes.15G087000' => 'mes', 'Manes.15G121500' => 'mes', 'Manes.16G028300' => 'mes', 'Manes.17G046100' => 'mes', 'Manes.17G069800' => 'mes', 'Manes.18G100500' => 'mes', 'Mapoly0002s0109' => 'mpo', 'Mapoly0024s0007' => 'mpo', 'Mapoly0089s0032' => 'mpo', 'MBI04_g42241_MAGBIO' => 'mbi', 'MBI05_g11988_MAGBIO' => 'mbi', 'MBI05_g35452_MAGBIO' => 'mbi', 'MBI07_g30179_MAGBIO' => 'mbi', 'MBI07_g35859_MAGBIO' => 'mbi', 'MBI07_g35860_MAGBIO' => 'mbi', 'MBI07_g37166_MAGBIO' => 'mbi', 'MBI08_g18172_MAGBIO' => 'mbi', 'MBI09_g08441_MAGBIO' => 'mbi', 'MBI13_g01676_MAGBIO' => 'mbi', 'MBI14_g42955_MAGBIO' => 'mbi', 'MBI16_g13161_MAGBIO' => 'mbi', 'MBI17_g27204_MAGBIO' => 'mbi', 'MBI19_g21595_MAGBIO' => 'mbi', 'MD00G1148400' => 'mdo', 'MD02G1301200' => 'mdo', 'MD03G1227800' => 'mdo', 'MD05G1041100' => 'mdo', 'MD05G1124800' => 'mdo', 'MD05G1284000' => 'mdo', 'MD05G1338800' => 'mdo', 'MD05G1338900' => 'mdo', 'MD07G1022800' => 'mdo', 'MD10G1047500' => 'mdo', 'MD10G1127500' => 'mdo', 'MD10G1262300' => 'mdo', 'MD10G1293800' => 'mdo', 'MD16G1074300' => 'mdo', 'Medtr1g021670' => 'mtr', 'Medtr1g096320' => 'mtr', 'Medtr2g013690' => 'mtr', 'Medtr2g019450' => 'mtr', 'Medtr2g085170' => 'mtr', 'Medtr4g088785' => 'mtr', 'Medtr8g055930' => 'mtr', 'Medtr8g085850' => 'mtr', 'MELO3C002605.2' => 'cme', 'MELO3C003891.2' => 'cme', 'MELO3C004012.2' => 'cme', 'MELO3C007134.2' => 'cme', 'MELO3C008118.2' => 'cme', 'MELO3C016700.2' => 'cme', 'MELO3C024127.2' => 'cme', 'MELO3C033361.2' => 'cme', 'MELO3C033362.2' => 'cme', 'Migut.C00430' => 'egut', 'Migut.C01246' => 'egut', 'Migut.E00101' => 'egut', 'Migut.H01486' => 'egut', 'Migut.H01939' => 'egut', 'Migut.K00360' => 'egut', 'Migut.M00910' => 'egut', 'Migut.M01139' => 'egut', 'Migut.N02677' => 'egut', 'MSTRG.13252' => 'ama', 'MSTRG.14701' => 'ama', 'MSTRG.1521' => 'ama', 'MSTRG.15884' => 'ama', 'MSTRG.16242' => 'ama', 'MSTRG.22285' => 'ama', 'MSTRG.22444' => 'ama', 'MSTRG.2349' => 'ama', 'MSTRG.26308' => 'ama', 'MSTRG.28296' => 'ama', 'MSTRG.9895' => 'ama', 'Nitab4.5_0000110g0060' => 'nta', 'Nitab4.5_0000420g0130' => 'nta', 'Nitab4.5_0000422g0030' => 'nta', 'Nitab4.5_0000560g0180' => 'nta', 'Nitab4.5_0000703g0100' => 'nta', 'Nitab4.5_0000786g0200' => 'nta', 'Nitab4.5_0001336g0020' => 'nta', 'Nitab4.5_0001796g0030' => 'nta', 'Nitab4.5_0003348g0060' => 'nta', 'Nitab4.5_0003698g0040' => 'nta', 'Nitab4.5_0003942g0090' => 'nta', 'Nitab4.5_0004775g0070' => 'nta', 'Nitab4.5_0004864g0030' => 'nta', 'Nitab4.5_0005615g0020' => 'nta', 'Nitab4.5_0009288g0030' => 'nta', 'Nitab4.5_0009341g0010' => 'nta', 'Nitab4.5_0009535g0010' => 'nta', 'Nn1g03995' => 'nnu', 'Nn1g04100' => 'nnu', 'Nn1g06530' => 'nnu', 'Nn3g16404' => 'nnu', 'Nn3g17212' => 'nnu', 'Nn3g20776' => 'nnu', 'Nn3g21923' => 'nnu', 'Nn5g27737' => 'nnu', 'Nn5g29461' => 'nnu', 'Nn7g38355' => 'nnu', 'Nn8g39873' => 'nnu', 'Oeu000548.2' => 'oeu', 'Oeu004672.1' => 'oeu', 'Oeu015605.2' => 'oeu', 'Oeu016092.1' => 'oeu', 'Oeu017879.3' => 'oeu', 'Oeu024910.1' => 'oeu', 'Oeu028965.1' => 'oeu', 'Oeu031269.1' => 'oeu', 'Oeu031270.1' => 'oeu', 'Oeu032535.1' => 'oeu', 'Oeu034151.1' => 'oeu', 'Oeu034152.1' => 'oeu', 'Oeu034588.2' => 'oeu', 'Oeu050846.1' => 'oeu', 'Oeu050849.2' => 'oeu', 'Oeu051063.2' => 'oeu', 'Oeu052368.1' => 'oeu', 'Oeu052370.1' => 'oeu', 'Os01g0210400' => 'osa', 'Os01g0304300' => 'osa', 'Os01g0749100' => 'osa', 'Os02g0745800' => 'osa', 'Os03g0769050' => 'osa', 'Os05g0531500' => 'osa', 'Os06g0724300' => 'osa', 'Os11g0198100' => 'osa', 'Peaxi162Scf00069g01425' => 'pax', 'Peaxi162Scf00280g00811' => 'pax', 'Peaxi162Scf00310g00615' => 'pax', 'Peaxi162Scf00362g00542' => 'pax', 'Peaxi162Scf00461g00310' => 'pax', 'Peaxi162Scf00530g00118' => 'pax', 'Peaxi162Scf00541g00057' => 'pax', 'Peaxi162Scf00661g00017' => 'pax', 'Peaxi162Scf00926g00027' => 'pax', 'Peaxi162Scf01064g00263' => 'pax', 'Peaxi162Scf01211g00135' => 'pax', 'PGR004G2336' => 'pgr', 'PGR042G0327' => 'pgr', 'PGR042G1957' => 'pgr', 'PGR042G2003' => 'pgr', 'PGR042G3929' => 'pgr', 'PGR083G1137' => 'pgr', 'PGR083G1364' => 'pgr', 'PGSC0003DMG400003381' => 'stu', 'PGSC0003DMG400003417' => 'stu', 'PGSC0003DMG400008981' => 'stu', 'PGSC0003DMG400012417' => 'stu', 'PGSC0003DMG400012823' => 'stu', 'PGSC0003DMG400016885' => 'stu', 'PGSC0003DMG400022812' => 'stu', 'PGSC0003DMG400029726' => 'stu', 'PGSC0003DMG401009243' => 'stu', 'PGSC0003DMG401031505' => 'stu', 'PGSC0003DMG402031505' => 'stu', 'Phvul.001G017600' => 'pvu', 'Phvul.002G193500' => 'pvu', 'Phvul.002G228900' => 'pvu', 'Phvul.002G236800' => 'pvu', 'Phvul.003G049500' => 'pvu', 'Phvul.005G072000' => 'pvu', 'Phvul.006G164800' => 'pvu', 'Phvul.006G185100' => 'pvu', 'Phvul.007G090000' => 'pvu', 'Potri.001G399800' => 'ptr', 'Potri.002G149900' => 'ptr', 'Potri.004G044100' => 'ptr', 'Potri.004G177600' => 'ptr', 'Potri.009G138000' => 'ptr', 'Potri.010G094000' => 'ptr', 'Potri.011G053000' => 'ptr', 'Potri.011G119300' => 'ptr', 'Potri.013G113700' => 'ptr', 'Potri.018G107800' => 'ptr', 'Potri.019G084100' => 'ptr', 'Pp3c14_23720' => 'ppa', 'Pp3c16_6340' => 'ppa', 'Pp3c23_13420' => 'ppa', 'Pp3c24_2740' => 'ppa', 'Pp3c25_860' => 'ppa', 'Pp3c8_21750' => 'ppa', 'Prupe.1G273000' => 'ppe', 'Prupe.1G273700' => 'ppe', 'Prupe.1G274100' => 'ppe', 'Prupe.2G023300' => 'ppe', 'Prupe.4G048000' => 'ppe', 'Prupe.4G080400' => 'ppe', 'Prupe.4G181200' => 'ppe', 'Prupe.8G056900' => 'ppe', 'Prupe.8G168700' => 'ppe', 'Psat1g189080' => 'psa', 'Psat1g204760' => 'psa', 'Psat4g175560' => 'psa', 'Psat4g177720' => 'psa', 'Psat5g244240' => 'psa', 'Psat6g010720' => 'psa', 'Psat6g187200' => 'psa', 'Psat7g072040' => 'psa', 'PSO017G3501' => 'pso', 'PSO063G2148' => 'pso', 'PSO063G5608' => 'pso', 'PSO210G6392' => 'pso', 'PSO541G2319' => 'pso', 'PSO541G2836' => 'pso', 'PSO541G4012' => 'pso', 'PSO541G6253' => 'pso', 'PSO675G0580' => 'pso', 'PSO675G0856' => 'pso', 'PSO675G5635' => 'pso', 'PSO675G9157' => 'pso', 'PSO832G1660' => 'pso', 'PSO832G1969' => 'pso', 'QL02p007186' => 'qlo', 'QL02p033904' => 'qlo', 'QL03p064391' => 'qlo', 'QL05p040593' => 'qlo', 'QL05p058242' => 'qlo', 'QL08p021825' => 'qlo', 'QL11p004981' => 'qlo', 'RcHm_v2.0_Chr1g0318301' => 'rch', 'RcHm_v2.0_Chr4g0418501' => 'rch', 'RcHm_v2.0_Chr4g0439971' => 'rch', 'RcHm_v2.0_Chr5g0008541' => 'rch', 'RcHm_v2.0_Chr5g0014101' => 'rch', 'RcHm_v2.0_Chr5g0014131' => 'rch', 'RcHm_v2.0_Chr5g0033621' => 'rch', 'RcHm_v2.0_Chr6g0272041' => 'rch', 'RcHm_v2.0_Chr6g0278831' => 'rch', 'Rhsim02G0130400' => 'rsi', 'Rhsim02G0171100' => 'rsi', 'Rhsim05G0053000' => 'rsi', 'Rhsim05G0053100' => 'rsi', 'Rhsim06G0096500' => 'rsi', 'Rhsim06G0096600' => 'rsi', 'Rhsim06G0199100' => 'rsi', 'Rhsim12G0062300' => 'rsi', 'Rhsim12G0062800' => 'rsi', 'Sabra02G0118600' => 'sbr', 'Sabra04G0027300' => 'sbr', 'Sabra04G0119500' => 'sbr', 'Sabra08G0112500' => 'sbr', 'Sabra11G0036800' => 'sbr', 'Sabra11G0103800' => 'sbr', 'Sabra13G0096300' => 'sbr', 'Sabra16G0262300' => 'sbr', 'Sabra18G0091700' => 'sbr', 'Sabra19G0095400' => 'sbr', 'SalBow6G3080' => 'sbo', 'SalBow7G1157' => 'sbo', 'SalBow7G2123' => 'sbo', 'SalBow7G2285' => 'sbo', 'SalBow7G3537' => 'sbo', 'SalBow8G2947' => 'sbo', 'SalBow8G4463' => 'sbo', 'SalBow8G5466' => 'sbo', 'Sc01g0001750' => 'sci', 'Sc02g0006640' => 'sci', 'Sc02g0006670' => 'sci', 'Sc04g0008220' => 'sci', 'Sc05g0006190' => 'sci', 'Sc08g0002760' => 'sci', 'Sc17g0006170' => 'sci', 'Sc22g0002050' => 'sci', 'Sc23g0001190' => 'sci', 'Sc24g0000980' => 'sci', 'Sed0006245' => 'sed', 'Sed0007543' => 'sed', 'Sed0009411' => 'sed', 'Sed0010765' => 'sed', 'Sed0012944' => 'sed', 'Sed0014682' => 'sed', 'Sed0016174' => 'sed', 'Sed0016796' => 'sed', 'Sed0020317' => 'sed', 'Sed0021467' => 'sed', 'SEGI_01316' => 'sgi', 'SEGI_03374' => 'sgi', 'SEGI_16265' => 'sgi', 'SEGI_18569' => 'sgi', 'SEGI_20351' => 'sgi', 'SEGI_26395' => 'sgi', 'SEGI_29469' => 'sgi', 'SEGI_34771' => 'sgi', 'SEGI_36769' => 'sgi', 'SEGI_37139' => 'sgi', 'SGA_v2.0_scaffold100G29687' => 'sas', 'SGA_v2.0_scaffold118G32472' => 'sas', 'SGA_v2.0_scaffold14G07051' => 'sas', 'SGA_v2.0_scaffold183G39845' => 'sas', 'SGA_v2.0_scaffold1G00174' => 'sas', 'SGA_v2.0_scaffold22G09714' => 'sas', 'SGA_v2.0_scaffold333G48992' => 'sas', 'SGA_v2.0_scaffold46G17491' => 'sas', 'SGA_v2.0_scaffold49G18294' => 'sas', 'SGA_v2.0_scaffold63G21658' => 'sas', 'SHI01741' => 'shi', 'SHI05771' => 'shi', 'SHI18077' => 'shi', 'SHI20525' => 'shi', 'SHI20527' => 'shi', 'SHI20528' => 'shi', 'SMO172G0185' => 'smo', 'SMO198G0020' => 'smo', 'SMO351G0006' => 'smo', 'SMO356G0118' => 'smo', 'SMO358G0296' => 'smo', 'SMO367G0079' => 'smo', 'SMO367G1277' => 'smo', 'Solyc01g014220.3' => 'sly', 'Solyc01g111770.2' => 'sly', 'Solyc02g078180.3' => 'sly', 'Solyc03g006430.3' => 'sly', 'Solyc03g006456.1' => 'sly', 'Solyc03g079860.2' => 'sly', 'Solyc04g079770.3' => 'sly', 'Solyc05g007430.4' => 'sly', 'Solyc07g063150.3' => 'sly', 'Solyc08g016620.3' => 'sly', 'Solyc09g057590.3' => 'sly', 'Solyc09g057600.1' => 'sly', 'Solyc10g009050.3' => 'sly', 'Solyc11g017420.2' => 'sly', 'Sopen01g053810' => 'spe', 'Sopen02g023040' => 'spe', 'Sopen03g002440' => 'spe', 'Sopen04g033350' => 'spe', 'Sopen05g003310' => 'spe', 'Sopen07g004050' => 'spe', 'Sopen07g031340' => 'spe', 'Sopen08g006990' => 'spe', 'Sopen10g004830' => 'spe', 'Sopen11g009370' => 'spe', 'Sp1g24450' => 'spa', 'Sp1g29670' => 'spa', 'Sp1g39600' => 'spa', 'Sp2g11080' => 'spa', 'Sp2g13970' => 'spa', 'Sp4g16130' => 'spa', 'Sp6g13080' => 'spa', 'Sp7g37270' => 'spa', 'TAR371G0065' => 'tar', 'TAR376G0340' => 'tar', 'TAR376G0435' => 'tar', 'TAR381G0002' => 'tar', 'TAR381G1236' => 'tar', 'TAR624G0055' => 'tar', 'TAR624G0324' => 'tar', 'TAR624G0696' => 'tar', 'TAR624G0906' => 'tar', 'TAR625G0107' => 'tar', 'TAR626G0015' => 'tar', 'TAR626G1356' => 'tar', 'TAR627G0888' => 'tar', 'TAR628G0399' => 'tar', 'TAR628G1327' => 'tar', 'TAR629G2831' => 'tar', 'TAR629G2874' => 'tar', 'TAR633G1432' => 'tar', 'TAR633G2771' => 'tar', 'THA.LOC104803394' => 'tha', 'THA.LOC104805153' => 'tha', 'THA.LOC104806784' => 'tha', 'THA.LOC104810473' => 'tha', 'THA.LOC104813100' => 'tha', 'THA.LOC104814215' => 'tha', 'THA.LOC104815554' => 'tha', 'THA.LOC104820544' => 'tha', 'THA.LOC104824754' => 'tha', 'THA.LOC104827717' => 'tha', 'Thecc.02G031400' => 'tca', 'Thecc.02G055900' => 'tca', 'Thecc.02G350800' => 'tca', 'Thecc.06G150900' => 'tca', 'Thecc.06G186600' => 'tca', 'Thecc.07G089600' => 'tca', 'Thecc.08G020400' => 'tca', 'Thecc.08G182100' => 'tca', 'Thhalv10000873m.g' => 'esa', 'Thhalv10004185m.g' => 'esa', 'Thhalv10006981m.g' => 'esa', 'Thhalv10007204m.g' => 'esa', 'Thhalv10011374m.g' => 'esa', 'Thhalv10013482m.g' => 'esa', 'Thhalv10017801m.g' => 'esa', 'Thhalv10024983m.g' => 'esa', 'TPR.G12072' => 'tpr', 'TPR.G15769' => 'tpr', 'TPR.G16504' => 'tpr', 'TPR.G16506' => 'tpr', 'TPR.G24345' => 'tpr', 'TPR.G26666' => 'tpr', 'TPR.G27320' => 'tpr', 'TPR.G31819' => 'tpr', 'TPR.G38879' => 'tpr', 'TPR.G39015' => 'tpr', 'TPR.G8819' => 'tpr', 'TWI09G0924' => 'twi', 'TWI12G0811' => 'twi', 'TWI12G1294' => 'twi', 'TWI31G0150' => 'twi', 'TWI36G1262' => 'twi', 'TWI38G1287' => 'twi', 'TWI38G1633' => 'twi', 'TWI38G1982' => 'twi', 'TWI39G0116' => 'twi', 'TWI60G1011' => 'twi', 'TWI63G0171' => 'twi', 'TWI73G0839' => 'twi', 'TWI79G1511' => 'twi', 'unitig_0.g915' => 'ugi', 'unitig_0.g916' => 'ugi', 'unitig_21.g20219' => 'ugi', 'unitig_21.g20416' => 'ugi', 'unitig_578.g16132' => 'ugi', 'unitig_578.g16718' => 'ugi', 'unitig_62.g23481' => 'ugi', 'unitig_744.g24535' => 'ugi', 'unitig_749.g13525' => 'ugi', 'vmacro01248' => 'vma', 'vmacro02290' => 'vma', 'vmacro10946' => 'vma', 'vmacro11865' => 'vma', 'vmacro12493' => 'vma', 'vmacro17322' => 'vma', 'vmacro21599' => 'vma', 'vmacro23041' => 'vma', 'VMungo0251G0004' => 'vmu', 'VMungo0251G2639' => 'vmu', 'VMungo0251G2967' => 'vmu', 'VMungo0540G0864' => 'vmu', 'VMungo0540G1569' => 'vmu', 'VMungo0647G0317' => 'vmu', 'VMungo0720G1373' => 'vmu', 'VMungo0720G1508' => 'vmu', 'VMungo1080G0485' => 'vmu', 'VMungo1215G3177' => 'vmu', 'Zm00001eb112600' => 'zma', 'Zm00001eb120220' => 'zma', 'Zm00001eb153240' => 'zma', 'Zm00001eb168880' => 'zma', 'Zm00001eb213920' => 'zma', 'Zm00001eb228280' => 'zma', 'Zm00001eb254580' => 'zma', 'Zm00001eb272180' => 'zma', 'Zm00001eb293190' => 'zma', 'Zm00001eb322930' => 'zma', 'Zm00001eb353360' => 'zma', 'Zm00001eb353390' => 'zma', 'Zm00001eb353430' => 'zma', 'Zm00001eb353440' => 'zma', 'Zm00001eb353780' => 'zma' ), 'gf_id' => 'HOM05D000499', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000499' ), 'data_identifier' => 'HOM05D000499', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000499', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1066', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p29780' => 'bna', 'A02p33180' => 'bna', 'A03p16470' => 'bna', 'A03p66010' => 'bna', 'A04p25970' => 'bna', 'A06p01270' => 'bna', 'A06p46080' => 'bna', 'A07p11400' => 'bna', 'A08p01840' => 'bna', 'A08p08230' => 'bna', 'A08p25740' => 'bna', 'A09p32070' => 'bna', 'A09p37830' => 'bna', 'A09p42840' => 'bna', 'A09p42850' => 'bna', 'Aa31LG10G2060' => 'aar', 'Aa31LG2G7410' => 'aar', 'Aa31LG6G10200' => 'aar', 'Aa31LG6G16680' => 'aar', 'Aa31LG6G8470' => 'aar', 'Aa31LG9G12730' => 'aar', 'Aa31LG9G13680' => 'aar', 'Aa31LG9G14920' => 'aar', 'Aa31LG9G6650' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4977' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5467' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3254' => 'aag', 'Actinidia02578' => 'ach', 'Actinidia07693' => 'ach', 'Actinidia08413' => 'ach', 'Actinidia08414' => 'ach', 'Actinidia15289' => 'ach', 'Actinidia19871' => 'ach', 'Actinidia21475' => 'ach', 'Actinidia22576' => 'ach', 'Actinidia28327' => 'ach', 'Actinidia32491' => 'ach', 'Actinidia39463' => 'ach', 'Actinidia39571' => 'ach', 'Ah.01g013750' => 'amhyb', 'Ah.01g023210' => 'amhyb', 'Ah.04g164850' => 'amhyb', 'Ah.05g178060' => 'amhyb', 'Ah.07g204270' => 'amhyb', 'Ah.07g208480' => 'amhyb', 'Ah.09g237410' => 'amhyb', 'Ah.14g089460' => 'amhyb', 'AL1G41790' => 'aly', 'AL1G49050' => 'aly', 'AL1G53810' => 'aly', 'AL1G61400' => 'aly', 'AL4G18580' => 'aly', 'AL5G12510' => 'aly', 'AL5G12540' => 'aly', 'AL6G43230' => 'aly', 'AL7G10370' => 'aly', 'AL7G19250' => 'aly', 'AL8G12240' => 'aly', 'AL8G18540' => 'aly', 'Aqoxy1G02409' => 'aox', 'Aqoxy2G03993' => 'aox', 'Aqoxy3G03357' => 'aox', 'Aqoxy4G00785' => 'aox', 'Aqoxy5G02598' => 'aox', 'Aqoxy6G00132' => 'aox', 'Aqoxy7G01776' => 'aox', 'Aqoxy7G02316' => 'aox', 'Aqoxy7G03973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.12AFKW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B8730' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27IQR1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3F75VG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3RE0GA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41TCQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.527VTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FIR39' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5W8UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DA38EV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ63HS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H1I32C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HC27T5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4M8AP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7N3CZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9UVDZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LS1NQA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT1D4B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SKC4TM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCFV76' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF9Q1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQWD9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1ZM88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WE07RT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YCK7VH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJE6Q6' => 'arhy', 'AT1G28240' => 'ath', 'AT1G34550' => 'ath', 'AT1G53040' => 'ath', 'AT2G02910' => 'ath', 'AT4G09630' => 'ath', 'AT4G38500' => 'ath', 'AT5G42660' => 'ath', 'AT5G46220' => 'ath', 'ATR0152G026' => 'atr', 'ATR0564G343' => 'atr', 'ATR0706G151' => 'atr', 'ATR0733G207' => 'atr', 'ATR0751G234' => 'atr', 'ATR0807G048' => 'atr', 'ATR1091G084' => 'atr', 'Atru.chr10.1229' => 'acertr', 'Atru.chr10.1230' => 'acertr', 'Atru.chr10.1874' => 'acertr', 'Atru.chr11.1808' => 'acertr', 'Atru.chr13.1795' => 'acertr', 'Atru.chr13.570' => 'acertr', 'Atru.chr2.2608' => 'acertr', 'Atru.chr2.2609' => 'acertr', 'Atru.chr5.3428' => 'acertr', 'Atru.chr8.1171' => 'acertr', 'AUR62004651' => 'cqu', 'AUR62008675' => 'cqu', 'AUR62010014' => 'cqu', 'AUR62013004' => 'cqu', 'AUR62014825' => 'cqu', 'AUR62015015' => 'cqu', 'AUR62015151' => 'cqu', 'AUR62017020' => 'cqu', 'AUR62019422' => 'cqu', 'AUR62023570' => 'cqu', 'AUR62025571' => 'cqu', 'AUR62029098' => 'cqu', 'AUR62033863' => 'cqu', 'AUR62034296' => 'cqu', 'AUR62040075' => 'cqu', 'BcaB02g07334' => 'bca', 'BcaB02g10575' => 'bca', 'BcaB03g12119' => 'bca', 'BcaB03g12120' => 'bca', 'BcaB03g13945' => 'bca', 'BcaB04g17123' => 'bca', 'BcaB04g17867' => 'bca', 'BcaB04g19839' => 'bca', 'BcaB07g30317' => 'bca', 'BcaB07g32432' => 'bca', 'BcaB07g33362' => 'bca', 'BcaB08g36611' => 'bca', 'BcaC01g00028' => 'bca', 'BcaC01g01356' => 'bca', 'BcaC01g02034' => 'bca', 'BcaC01g06051' => 'bca', 'BcaC03g16839' => 'bca', 'BcaC03g17176' => 'bca', 'BcaC05g26829' => 'bca', 'BcaC06g31490' => 'bca', 'BcaC06g35344' => 'bca', 'BcaC06g36570' => 'bca', 'BcaC07g37537' => 'bca', 'BcaC08g43491' => 'bca', 'BcaC08g43773' => 'bca', 'BcaNung00234' => 'bca', 'BcaNung01982' => 'bca', 'BcaNung03707' => 'bca', 'BcaNung06454' => 'bca', 'BolC2t10762H' => 'bol', 'BolC2t11191H' => 'bol', 'BolC3t14322H' => 'bol', 'BolC3t19747H' => 'bol', 'BolC3t21425H' => 'bol', 'BolC4t27800H' => 'bol', 'BolC5t31423H' => 'bol', 'BolC6t35951H' => 'bol', 'BolC6t36282H' => 'bol', 'BolC7t40678H' => 'bol', 'BolC7t40679H' => 'bol', 'BolC7t42222H' => 'bol', 'BolC7t43492H' => 'bol', 'BolC7t46785H' => 'bol', 'BolC8t47853H' => 'bol', 'BolC9t56805H' => 'bol', 'BraA02t08000Z' => 'bra', 'BraA02t08341Z' => 'bra', 'BraA03t10936Z' => 'bra', 'BraA03t15657Z' => 'bra', 'BraA04t18100Z' => 'bra', 'BraA05t20523Z' => 'bra', 'BraA06t23353Z' => 'bra', 'BraA06t27473Z' => 'bra', 'BraA06t27769Z' => 'bra', 'BraA07t28928Z' => 'bra', 'BraA08t32236Z' => 'bra', 'BraA08t32841Z' => 'bra', 'BraA08t34524Z' => 'bra', 'BraA09t38742Z' => 'bra', 'BraA09t39295Z' => 'bra', 'C02p47180' => 'bna', 'C02p50990' => 'bna', 'C03p19360' => 'bna', 'C03p74950' => 'bna', 'C03p91000' => 'bna', 'C04p63260' => 'bna', 'C05p27050' => 'bna', 'C06p08750' => 'bna', 'C06p11490' => 'bna', 'C07p02820' => 'bna', 'C07p17180' => 'bna', 'C07p29440' => 'bna', 'C07p63730' => 'bna', 'C09p39260' => 'bna', 'CAN.G1164.34' => 'can', 'CAN.G1164.39' => 'can', 'CAN.G1530.3' => 'can', 'CAN.G162.61' => 'can', 'CAN.G176.6' => 'can', 'CAN.G289.49' => 'can', 'CAN.G370.21' => 'can', 'CAN.G370.22' => 'can', 'CAN.G371.117' => 'can', 'CAN.G58.37' => 'can', 'CAN.G588.98' => 'can', 'CANSAT21G2266' => 'cansat', 'CANSAT25G2799' => 'cansat', 'CANSAT35G0862' => 'cansat', 'CANSAT35G1704' => 'cansat', 'CANSAT35G1760' => 'cansat', 'CANSAT56G3971' => 'cansat', 'CANSAT56G4116' => 'cansat', 'CANSAT80G1259' => 'cansat', 'CARHR027730' => 'chi', 'CARHR033880' => 'chi', 'CARHR043270' => 'chi', 'CARHR145330' => 'chi', 'CARHR145340' => 'chi', 'CARHR175570' => 'chi', 'CARHR181570' => 'chi', 'CARHR258470' => 'chi', 'CARHR260490' => 'chi', 'CARHR294220' => 'chi', 'Carub.0001s2668' => 'cru', 'Carub.0001s3257' => 'cru', 'Carub.0001s4220' => 'cru', 'Carub.0005s0179' => 'cru', 'Carub.0006s2807' => 'cru', 'Carub.0007s0039' => 'cru', 'Carub.0008s0169' => 'cru', 'Carub.0008s0636' => 'cru', 'Ca_00338_v3' => 'car', 'Ca_00542_v3' => 'car', 'Ca_01844_v3' => 'car', 'Ca_10611_v3' => 'car', 'Ca_13326_v3' => 'car', 'Ca_17944_v3' => 'car', 'Ca_18546_v3' => 'car', 'Ca_24219_v3' => 'car', 'Ca_29972_v3' => 'car', 'CBR_g3681' => 'cbr', 'CBR_g40021' => 'cbr', 'Cc01_g08140' => 'ccan', 'Cc02_g13410' => 'ccan', 'Cc02_g37480' => 'ccan', 'Cc05_g12030' => 'ccan', 'Cc09_g03370' => 'ccan', 'Cc09_g10300' => 'ccan', 'Cc10_g03530' => 'ccan', 'Cc10_g11380' => 'ccan', 'CDE01G0176' => 'cde', 'CDE02G0675' => 'cde', 'CDE02G0942' => 'cde', 'CDE02G1153' => 'cde', 'CDE02G4177' => 'cde', 'CDE04G2117' => 'cde', 'CDE04G2736' => 'cde', 'CDE08G1161' => 'cde', 'CDE09G1238' => 'cde', 'Cfa000467' => 'cfa', 'Cfa000947' => 'cfa', 'Cfa004969' => 'cfa', 'Cfa005284' => 'cfa', 'Cfa008993' => 'cfa', 'Cfa018187' => 'cfa', 'Cfa018454' => 'cfa', 'Cfa020585' => 'cfa', 'Ciclev10000424m.g' => 'ccl', 'Ciclev10003605m.g' => 'ccl', 'Ciclev10007828m.g' => 'ccl', 'Ciclev10014620m.g' => 'ccl', 'Ciclev10015169m.g' => 'ccl', 'Ciclev10018291m.g' => 'ccl', 'Ciclev10028256m.g' => 'ccl', 'Ciclev10033822m.g' => 'ccl', 'CiPaw.05G060300' => 'cil', 'CiPaw.05G085000' => 'cil', 'CiPaw.06G083700' => 'cil', 'CiPaw.06G120300' => 'cil', 'CiPaw.09G060500' => 'cil', 'CiPaw.09G123800' => 'cil', 'CiPaw.11G169700' => 'cil', 'CiPaw.12G118300' => 'cil', 'CiPaw.15G071000' => 'cil', 'CiPaw.15G081900' => 'cil', 'ClCG01G024610' => 'cla', 'ClCG03G006070' => 'cla', 'ClCG05G019250' => 'cla', 'ClCG09G009500' => 'cla', 'ClCG11G008200' => 'cla', 'ClCG11G018080' => 'cla', 'COL.COLO4_17373' => 'col', 'COL.COLO4_22994' => 'col', 'COL.COLO4_26389' => 'col', 'COL.COLO4_27170' => 'col', 'COL.COLO4_31074' => 'col', 'COL.COLO4_31465' => 'col', 'COL.COLO4_36438' => 'col', 'COL.COLO4_36439' => 'col', 'Cpa.g.c38781' => 'cpa', 'Cpa.g.sc128.12' => 'cpa', 'Cpa.g.sc166.7' => 'cpa', 'Cpa.g.sc166.8' => 'cpa', 'Cpa.g.sc20.111' => 'cpa', 'Cpa.g.sc27.31' => 'cpa', 'Cpa.g.sc64.36' => 'cpa', 'Cpa.g.sc64.37' => 'cpa', 'Cpa.g.sc66.49' => 'cpa', 'Cpa.g.sc80.64' => 'cpa', 'CsaV3_1G012320' => 'csa', 'CsaV3_2G008480' => 'csa', 'CsaV3_2G033450' => 'csa', 'CsaV3_3G044830' => 'csa', 'CsaV3_4G033710' => 'csa', 'CsaV3_6G051730' => 'csa', 'CsaV3_7G025350' => 'csa', 'CSS0001067' => 'camsi', 'CSS0005996' => 'camsi', 'CSS0006590' => 'camsi', 'CSS0009673' => 'camsi', 'CSS0010201' => 'camsi', 'CSS0010549' => 'camsi', 'CSS0011364' => 'camsi', 'CSS0014473' => 'camsi', 'CSS0014961' => 'camsi', 'CSS0020191' => 'camsi', 'CSS0021165' => 'camsi', 'CSS0022306' => 'camsi', 'CSS0030591' => 'camsi', 'CSS0030696' => 'camsi', 'CSS0032653' => 'camsi', 'CSS0037487' => 'camsi', 'CSS0041102' => 'camsi', 'CSS0041261' => 'camsi', 'CSS0046246' => 'camsi', 'CSS0049256' => 'camsi', 'DCAR_004075' => 'dca', 'DCAR_011538' => 'dca', 'DCAR_019553' => 'dca', 'DCAR_020952' => 'dca', 'DCAR_021739' => 'dca', 'DCAR_027407' => 'dca', 'DCAR_027913' => 'dca', 'DCAR_028066' => 'dca', 'Dinv05899' => 'din', 'Dinv07563' => 'din', 'Dinv08010' => 'din', 'Dinv14125' => 'din', 'Dinv20172' => 'din', 'Dinv30743' => 'din', 'Dinv31229' => 'din', 'Dinv34162' => 'din', 'Dinv36028' => 'din', 'Dinv39368' => 'din', 'Dinv40565' => 'din', 'Dinv41706' => 'din', 'Duzib052G0089' => 'dzi', 'Duzib116G0641' => 'dzi', 'Duzib132G0069' => 'dzi', 'Duzib132G1219' => 'dzi', 'Duzib147G0278' => 'dzi', 'Duzib160G0480' => 'dzi', 'Duzib170G0661' => 'dzi', 'Duzib177G0591' => 'dzi', 'Duzib187G1353' => 'dzi', 'Duzib192G0858' => 'dzi', 'Duzib192G0883' => 'dzi', 'Duzib213G0506' => 'dzi', 'Duzib235G0289' => 'dzi', 'Duzib251G0422' => 'dzi', 'ECA232G3898' => 'eca', 'ECA233G5950' => 'eca', 'ECA234G1699' => 'eca', 'ECA234G2421' => 'eca', 'ECA236G0426' => 'eca', 'ECA236G4331' => 'eca', 'ECA248G2573' => 'eca', 'EL10Ac1g00077' => 'bvu', 'EL10Ac1g01746' => 'bvu', 'EL10Ac2g03464' => 'bvu', 'EL10Ac4g08176' => 'bvu', 'EL10Ac7g17521' => 'bvu', 'EL10Ac8g20386' => 'bvu', 'EL10Ac9g21343' => 'bvu', 'EL10Ac9g22688' => 'bvu', 'Eucgr.B03434' => 'egr', 'Eucgr.D00618' => 'egr', 'Eucgr.E02395' => 'egr', 'Eucgr.F01129' => 'egr', 'Eucgr.F02622' => 'egr', 'Eucgr.F04207' => 'egr', 'FAN01G0570' => 'fan', 'FAN03G3351' => 'fan', 'FAN06G3702' => 'fan', 'FAN07G2149' => 'fan', 'FAN10G3758' => 'fan', 'FAN11G1170' => 'fan', 'FAN11G2050' => 'fan', 'FAN11G2724' => 'fan', 'FAN12G1700' => 'fan', 'FAN12G2028' => 'fan', 'FAN15G1160' => 'fan', 'FAN15G3063' => 'fan', 'FAN16G2540' => 'fan', 'FAN16G3077' => 'fan', 'FAN16G3624' => 'fan', 'FAN17G0221' => 'fan', 'FAN20G2492' => 'fan', 'FAN20G2905' => 'fan', 'FAN21G0548' => 'fan', 'FAN21G1300' => 'fan', 'FAN22G0077' => 'fan', 'FAN22G1315' => 'fan', 'FAN24G1280' => 'fan', 'FAN24G1445' => 'fan', 'FAN24G3527' => 'fan', 'FAN25G0464' => 'fan', 'FAN25G2885' => 'fan', 'FAN25G3270' => 'fan', 'FAN27G1101' => 'fan', 'FAN27G2846' => 'fan', 'FAN27G3524' => 'fan', 'FvH4_2g11770' => 'fve', 'FvH4_2g15630' => 'fve', 'FvH4_3g05570' => 'fve', 'FvH4_3g09110' => 'fve', 'FvH4_3g19940' => 'fve', 'FvH4_4g04821' => 'fve', 'FvH4_4g31480' => 'fve', 'FvH4_7g01740' => 'fve', 'Glyma.05G130400' => 'gma', 'Glyma.05G156400' => 'gma', 'Glyma.07G197000' => 'gma', 'Glyma.08G085151' => 'gma', 'Glyma.08G114500' => 'gma', 'Glyma.08G300400' => 'gma', 'Glyma.10G215800' => 'gma', 'Glyma.12G224400' => 'gma', 'Glyma.13G179300' => 'gma', 'Glyma.13G218151' => 'gma', 'Glyma.13G238800' => 'gma', 'Glyma.13G276900' => 'gma', 'Glyma.14G078200' => 'gma', 'Glyma.15G074500' => 'gma', 'Glyma.15G094100' => 'gma', 'Glyma.17G247200' => 'gma', 'Glyma.18G120100' => 'gma', 'Glyma.20G176000' => 'gma', 'Gohir.A01G063600' => 'ghi', 'Gohir.A01G170301' => 'ghi', 'Gohir.A02G060500' => 'ghi', 'Gohir.A05G133850' => 'ghi', 'Gohir.A05G161400' => 'ghi', 'Gohir.A06G012900' => 'ghi', 'Gohir.A06G035901' => 'ghi', 'Gohir.A06G127100' => 'ghi', 'Gohir.A06G210500' => 'ghi', 'Gohir.A08G008650' => 'ghi', 'Gohir.A09G072700' => 'ghi', 'Gohir.A09G088301' => 'ghi', 'Gohir.A10G040600' => 'ghi', 'Gohir.A12G036300' => 'ghi', 'Gohir.A12G143350' => 'ghi', 'Gohir.A12G165500' => 'ghi', 'Gohir.A13G145700' => 'ghi', 'Gohir.D01G050000' => 'ghi', 'Gohir.D01G051366' => 'ghi', 'Gohir.D01G161350' => 'ghi', 'Gohir.D02G065900' => 'ghi', 'Gohir.D05G164200' => 'ghi', 'Gohir.D05G355500' => 'ghi', 'Gohir.D06G010400' => 'ghi', 'Gohir.D06G111250' => 'ghi', 'Gohir.D06G132000' => 'ghi', 'Gohir.D06G210500' => 'ghi', 'Gohir.D07G165675' => 'ghi', 'Gohir.D08G062240' => 'ghi', 'Gohir.D08G086101' => 'ghi', 'Gohir.D08G138060' => 'ghi', 'Gohir.D09G072300' => 'ghi', 'Gohir.D10G041400' => 'ghi', 'Gohir.D11G191020' => 'ghi', 'Gohir.D11G212066' => 'ghi', 'Gohir.D12G036300' => 'ghi', 'Gohir.D12G168600' => 'ghi', 'Gohir.D13G150600' => 'ghi', 'Gorai.001G057300' => 'gra', 'Gorai.002G069900' => 'gra', 'Gorai.002G200000' => 'gra', 'Gorai.003G067600' => 'gra', 'Gorai.005G074800' => 'gra', 'Gorai.006G087300' => 'gra', 'Gorai.008G037500' => 'gra', 'Gorai.008G181400' => 'gra', 'Gorai.009G169400' => 'gra', 'Gorai.009G387900' => 'gra', 'Gorai.010G013300' => 'gra', 'Gorai.010G153800' => 'gra', 'Gorai.010G255800' => 'gra', 'Gorai.011G043700' => 'gra', 'Gorai.011G198900' => 'gra', 'Gorai.013G168400' => 'gra', 'GSVIVG01005212001' => 'vvi', 'GSVIVG01006163001' => 'vvi', 'GSVIVG01009625001' => 'vvi', 'GSVIVG01014338001' => 'vvi', 'GSVIVG01020005001' => 'vvi', 'GSVIVG01021450001' => 'vvi', 'GSVIVG01023975001' => 'vvi', 'GSVIVG01034490001' => 'vvi', 'HanXRQChr04g0112071' => 'han', 'HanXRQChr05g0131151' => 'han', 'HanXRQChr09g0262371' => 'han', 'HanXRQChr09g0268401' => 'han', 'HanXRQChr10g0279241' => 'han', 'HanXRQChr10g0297961' => 'han', 'HanXRQChr11g0326231' => 'han', 'HanXRQChr11g0328471' => 'han', 'HanXRQChr16g0507941' => 'han', 'HanXRQChr17g0560211' => 'han', 'Haze_02108' => 'cav', 'Haze_02428' => 'cav', 'Haze_05593' => 'cav', 'Haze_06448' => 'cav', 'Haze_09427' => 'cav', 'Haze_12022' => 'cav', 'Haze_17612' => 'cav', 'Haze_17928' => 'cav', 'Hma1.2p1_0032F.1_g019250' => 'hma', 'Hma1.2p1_0163F.1_g072690' => 'hma', 'Hma1.2p1_0265F.1_g106710' => 'hma', 'Hma1.2p1_0286F.1_g113970' => 'hma', 'Hma1.2p1_0363F.1_g136640' => 'hma', 'Hma1.2p1_0584F.1_g183470' => 'hma', 'Hma1.2p1_0885F.1_g232570' => 'hma', 'HPP92_006022' => 'vpl', 'HPP92_007320' => 'vpl', 'HPP92_011521' => 'vpl', 'HPP92_019387' => 'vpl', 'HPP92_024038' => 'vpl', 'Hund05891' => 'sun', 'Hund06450' => 'sun', 'Hund12053' => 'sun', 'Hund16800' => 'sun', 'Hund21222' => 'sun', 'Hund22896' => 'sun', 'Hund23746' => 'sun', 'Hund27083' => 'sun', 'Lalb_Chr02g0141831' => 'lal', 'Lalb_Chr02g0141841' => 'lal', 'Lalb_Chr05g0220411' => 'lal', 'Lalb_Chr06g0162081' => 'lal', 'Lalb_Chr09g0327651' => 'lal', 'Lalb_Chr13g0295051' => 'lal', 'Lalb_Chr15g0086801' => 'lal', 'Lalb_Chr16g0383781' => 'lal', 'Lalb_Chr16g0383791' => 'lal', 'Lalb_Chr18g0055441' => 'lal', 'Lalb_Chr18g0059611' => 'lal', 'Lalb_Chr20g0109661' => 'lal', 'Lalb_Chr20g0109831' => 'lal', 'Lalb_Chr20g0121871' => 'lal', 'Lalb_Chr22g0355361' => 'lal', 'Lalb_Chr25g0286371' => 'lal', 'Lj1A1187G43' => 'lonja', 'Lj1A1205T50' => 'lonja', 'Lj1A800G33' => 'lonja', 'Lj1C1187T7' => 'lonja', 'Lj1C843T11' => 'lonja', 'Lj1g0010940' => 'lja', 'Lj2A288T69' => 'lonja', 'Lj3g0024276' => 'lja', 'Lj4A47T76' => 'lonja', 'Lj4g0005805' => 'lja', 'Lj4g0006097' => 'lja', 'Lj4g0008528' => 'lja', 'Lj4g0024907' => 'lja', 'Lj5g0012472' => 'lja', 'Lj5g0018648' => 'lja', 'Lj6C789G1' => 'lonja', 'Lj6g0004000' => 'lja', 'Lj7A292G67' => 'lonja', 'Lj7A292T64' => 'lonja', 'Lj9A400T58' => 'lonja', 'Lsat_1_v5_gn_1_126181' => 'lsa', 'Lsat_1_v5_gn_4_123041' => 'lsa', 'Lsat_1_v5_gn_4_133620' => 'lsa', 'Lsat_1_v5_gn_4_53221' => 'lsa', 'Lsat_1_v5_gn_4_71961' => 'lsa', 'Lsat_1_v5_gn_7_105241' => 'lsa', 'Lsat_1_v5_gn_7_21361' => 'lsa', 'Lsat_1_v5_gn_7_28860' => 'lsa', 'Lsat_1_v5_gn_7_31260' => 'lsa', 'Lsat_1_v5_gn_8_52801' => 'lsa', 'Manes.02G191400' => 'mes', 'Manes.03G110100' => 'mes', 'Manes.04G071100' => 'mes', 'Manes.05G100500' => 'mes', 'Manes.05G164700' => 'mes', 'Manes.15G087000' => 'mes', 'Manes.15G121500' => 'mes', 'Manes.16G028300' => 'mes', 'Manes.17G046100' => 'mes', 'Manes.17G069800' => 'mes', 'Manes.18G100500' => 'mes', 'Mapoly0002s0109' => 'mpo', 'Mapoly0024s0007' => 'mpo', 'Mapoly0089s0032' => 'mpo', 'MBI04_g42241_MAGBIO' => 'mbi', 'MBI05_g11988_MAGBIO' => 'mbi', 'MBI05_g35452_MAGBIO' => 'mbi', 'MBI07_g30179_MAGBIO' => 'mbi', 'MBI07_g35859_MAGBIO' => 'mbi', 'MBI07_g35860_MAGBIO' => 'mbi', 'MBI07_g37166_MAGBIO' => 'mbi', 'MBI08_g18172_MAGBIO' => 'mbi', 'MBI09_g08441_MAGBIO' => 'mbi', 'MBI13_g01676_MAGBIO' => 'mbi', 'MBI14_g42955_MAGBIO' => 'mbi', 'MBI16_g13161_MAGBIO' => 'mbi', 'MBI17_g27204_MAGBIO' => 'mbi', 'MBI19_g21595_MAGBIO' => 'mbi', 'MD00G1148400' => 'mdo', 'MD02G1301200' => 'mdo', 'MD03G1227800' => 'mdo', 'MD05G1041100' => 'mdo', 'MD05G1124800' => 'mdo', 'MD05G1284000' => 'mdo', 'MD05G1338800' => 'mdo', 'MD05G1338900' => 'mdo', 'MD07G1022800' => 'mdo', 'MD10G1047500' => 'mdo', 'MD10G1127500' => 'mdo', 'MD10G1262300' => 'mdo', 'MD10G1293800' => 'mdo', 'MD16G1074300' => 'mdo', 'Medtr1g021670' => 'mtr', 'Medtr1g096320' => 'mtr', 'Medtr2g013690' => 'mtr', 'Medtr2g019450' => 'mtr', 'Medtr2g085170' => 'mtr', 'Medtr4g088785' => 'mtr', 'Medtr8g055930' => 'mtr', 'Medtr8g085850' => 'mtr', 'MELO3C002605.2' => 'cme', 'MELO3C003891.2' => 'cme', 'MELO3C004012.2' => 'cme', 'MELO3C007134.2' => 'cme', 'MELO3C008118.2' => 'cme', 'MELO3C016700.2' => 'cme', 'MELO3C024127.2' => 'cme', 'MELO3C033361.2' => 'cme', 'MELO3C033362.2' => 'cme', 'Migut.C00430' => 'egut', 'Migut.C01246' => 'egut', 'Migut.E00101' => 'egut', 'Migut.H01486' => 'egut', 'Migut.H01939' => 'egut', 'Migut.K00360' => 'egut', 'Migut.M00910' => 'egut', 'Migut.M01139' => 'egut', 'Migut.N02677' => 'egut', 'MSTRG.13252' => 'ama', 'MSTRG.14701' => 'ama', 'MSTRG.1521' => 'ama', 'MSTRG.15884' => 'ama', 'MSTRG.16242' => 'ama', 'MSTRG.22285' => 'ama', 'MSTRG.22444' => 'ama', 'MSTRG.2349' => 'ama', 'MSTRG.26308' => 'ama', 'MSTRG.28296' => 'ama', 'MSTRG.9895' => 'ama', 'Nitab4.5_0000110g0060' => 'nta', 'Nitab4.5_0000420g0130' => 'nta', 'Nitab4.5_0000422g0030' => 'nta', 'Nitab4.5_0000560g0180' => 'nta', 'Nitab4.5_0000703g0100' => 'nta', 'Nitab4.5_0000786g0200' => 'nta', 'Nitab4.5_0001336g0020' => 'nta', 'Nitab4.5_0001796g0030' => 'nta', 'Nitab4.5_0003348g0060' => 'nta', 'Nitab4.5_0003698g0040' => 'nta', 'Nitab4.5_0003942g0090' => 'nta', 'Nitab4.5_0004775g0070' => 'nta', 'Nitab4.5_0004864g0030' => 'nta', 'Nitab4.5_0005615g0020' => 'nta', 'Nitab4.5_0009288g0030' => 'nta', 'Nitab4.5_0009341g0010' => 'nta', 'Nitab4.5_0009535g0010' => 'nta', 'Nn1g03995' => 'nnu', 'Nn1g04100' => 'nnu', 'Nn1g06530' => 'nnu', 'Nn3g16404' => 'nnu', 'Nn3g17212' => 'nnu', 'Nn3g20776' => 'nnu', 'Nn3g21923' => 'nnu', 'Nn5g27737' => 'nnu', 'Nn5g29461' => 'nnu', 'Nn7g38355' => 'nnu', 'Nn8g39873' => 'nnu', 'Oeu000548.2' => 'oeu', 'Oeu004672.1' => 'oeu', 'Oeu015605.2' => 'oeu', 'Oeu016092.1' => 'oeu', 'Oeu017879.3' => 'oeu', 'Oeu024910.1' => 'oeu', 'Oeu028965.1' => 'oeu', 'Oeu031269.1' => 'oeu', 'Oeu031270.1' => 'oeu', 'Oeu032535.1' => 'oeu', 'Oeu034151.1' => 'oeu', 'Oeu034152.1' => 'oeu', 'Oeu034588.2' => 'oeu', 'Oeu050846.1' => 'oeu', 'Oeu050849.2' => 'oeu', 'Oeu051063.2' => 'oeu', 'Oeu052368.1' => 'oeu', 'Oeu052370.1' => 'oeu', 'Os01g0210400' => 'osa', 'Os01g0304300' => 'osa', 'Os01g0749100' => 'osa', 'Os02g0745800' => 'osa', 'Os03g0769050' => 'osa', 'Os05g0531500' => 'osa', 'Os06g0724300' => 'osa', 'Os11g0198100' => 'osa', 'Peaxi162Scf00069g01425' => 'pax', 'Peaxi162Scf00280g00811' => 'pax', 'Peaxi162Scf00310g00615' => 'pax', 'Peaxi162Scf00362g00542' => 'pax', 'Peaxi162Scf00461g00310' => 'pax', 'Peaxi162Scf00530g00118' => 'pax', 'Peaxi162Scf00541g00057' => 'pax', 'Peaxi162Scf00661g00017' => 'pax', 'Peaxi162Scf00926g00027' => 'pax', 'Peaxi162Scf01064g00263' => 'pax', 'Peaxi162Scf01211g00135' => 'pax', 'PGR004G2336' => 'pgr', 'PGR042G0327' => 'pgr', 'PGR042G1957' => 'pgr', 'PGR042G2003' => 'pgr', 'PGR042G3929' => 'pgr', 'PGR083G1137' => 'pgr', 'PGR083G1364' => 'pgr', 'PGSC0003DMG400003381' => 'stu', 'PGSC0003DMG400003417' => 'stu', 'PGSC0003DMG400008981' => 'stu', 'PGSC0003DMG400012417' => 'stu', 'PGSC0003DMG400012823' => 'stu', 'PGSC0003DMG400016885' => 'stu', 'PGSC0003DMG400022812' => 'stu', 'PGSC0003DMG400029726' => 'stu', 'PGSC0003DMG401009243' => 'stu', 'PGSC0003DMG401031505' => 'stu', 'PGSC0003DMG402031505' => 'stu', 'Phvul.001G017600' => 'pvu', 'Phvul.002G193500' => 'pvu', 'Phvul.002G228900' => 'pvu', 'Phvul.002G236800' => 'pvu', 'Phvul.003G049500' => 'pvu', 'Phvul.005G072000' => 'pvu', 'Phvul.006G164800' => 'pvu', 'Phvul.006G185100' => 'pvu', 'Phvul.007G090000' => 'pvu', 'Potri.001G399800' => 'ptr', 'Potri.002G149900' => 'ptr', 'Potri.004G044100' => 'ptr', 'Potri.004G177600' => 'ptr', 'Potri.009G138000' => 'ptr', 'Potri.010G094000' => 'ptr', 'Potri.011G053000' => 'ptr', 'Potri.011G119300' => 'ptr', 'Potri.013G113700' => 'ptr', 'Potri.018G107800' => 'ptr', 'Potri.019G084100' => 'ptr', 'Pp3c14_23720' => 'ppa', 'Pp3c16_6340' => 'ppa', 'Pp3c23_13420' => 'ppa', 'Pp3c24_2740' => 'ppa', 'Pp3c25_860' => 'ppa', 'Pp3c8_21750' => 'ppa', 'Prupe.1G273000' => 'ppe', 'Prupe.1G273700' => 'ppe', 'Prupe.1G274100' => 'ppe', 'Prupe.2G023300' => 'ppe', 'Prupe.4G048000' => 'ppe', 'Prupe.4G080400' => 'ppe', 'Prupe.4G181200' => 'ppe', 'Prupe.8G056900' => 'ppe', 'Prupe.8G168700' => 'ppe', 'Psat1g189080' => 'psa', 'Psat1g204760' => 'psa', 'Psat4g175560' => 'psa', 'Psat4g177720' => 'psa', 'Psat5g244240' => 'psa', 'Psat6g010720' => 'psa', 'Psat6g187200' => 'psa', 'Psat7g072040' => 'psa', 'PSO017G3501' => 'pso', 'PSO063G2148' => 'pso', 'PSO063G5608' => 'pso', 'PSO210G6392' => 'pso', 'PSO541G2319' => 'pso', 'PSO541G2836' => 'pso', 'PSO541G4012' => 'pso', 'PSO541G6253' => 'pso', 'PSO675G0580' => 'pso', 'PSO675G0856' => 'pso', 'PSO675G5635' => 'pso', 'PSO675G9157' => 'pso', 'PSO832G1660' => 'pso', 'PSO832G1969' => 'pso', 'QL02p007186' => 'qlo', 'QL02p033904' => 'qlo', 'QL03p064391' => 'qlo', 'QL05p040593' => 'qlo', 'QL05p058242' => 'qlo', 'QL08p021825' => 'qlo', 'QL11p004981' => 'qlo', 'RcHm_v2.0_Chr1g0318301' => 'rch', 'RcHm_v2.0_Chr4g0418501' => 'rch', 'RcHm_v2.0_Chr4g0439971' => 'rch', 'RcHm_v2.0_Chr5g0008541' => 'rch', 'RcHm_v2.0_Chr5g0014101' => 'rch', 'RcHm_v2.0_Chr5g0014131' => 'rch', 'RcHm_v2.0_Chr5g0033621' => 'rch', 'RcHm_v2.0_Chr6g0272041' => 'rch', 'RcHm_v2.0_Chr6g0278831' => 'rch', 'Rhsim02G0130400' => 'rsi', 'Rhsim02G0171100' => 'rsi', 'Rhsim05G0053000' => 'rsi', 'Rhsim05G0053100' => 'rsi', 'Rhsim06G0096500' => 'rsi', 'Rhsim06G0096600' => 'rsi', 'Rhsim06G0199100' => 'rsi', 'Rhsim12G0062300' => 'rsi', 'Rhsim12G0062800' => 'rsi', 'Sabra02G0118600' => 'sbr', 'Sabra04G0027300' => 'sbr', 'Sabra04G0119500' => 'sbr', 'Sabra08G0112500' => 'sbr', 'Sabra11G0036800' => 'sbr', 'Sabra11G0103800' => 'sbr', 'Sabra13G0096300' => 'sbr', 'Sabra16G0262300' => 'sbr', 'Sabra18G0091700' => 'sbr', 'Sabra19G0095400' => 'sbr', 'SalBow6G3080' => 'sbo', 'SalBow7G1157' => 'sbo', 'SalBow7G2123' => 'sbo', 'SalBow7G2285' => 'sbo', 'SalBow7G3537' => 'sbo', 'SalBow8G2947' => 'sbo', 'SalBow8G4463' => 'sbo', 'SalBow8G5466' => 'sbo', 'Sc01g0001750' => 'sci', 'Sc02g0006640' => 'sci', 'Sc02g0006670' => 'sci', 'Sc04g0008220' => 'sci', 'Sc05g0006190' => 'sci', 'Sc08g0002760' => 'sci', 'Sc17g0006170' => 'sci', 'Sc22g0002050' => 'sci', 'Sc23g0001190' => 'sci', 'Sc24g0000980' => 'sci', 'Sed0006245' => 'sed', 'Sed0007543' => 'sed', 'Sed0009411' => 'sed', 'Sed0010765' => 'sed', 'Sed0012944' => 'sed', 'Sed0014682' => 'sed', 'Sed0016174' => 'sed', 'Sed0016796' => 'sed', 'Sed0020317' => 'sed', 'Sed0021467' => 'sed', 'SEGI_01316' => 'sgi', 'SEGI_03374' => 'sgi', 'SEGI_16265' => 'sgi', 'SEGI_18569' => 'sgi', 'SEGI_20351' => 'sgi', 'SEGI_26395' => 'sgi', 'SEGI_29469' => 'sgi', 'SEGI_34771' => 'sgi', 'SEGI_36769' => 'sgi', 'SEGI_37139' => 'sgi', 'SGA_v2.0_scaffold100G29687' => 'sas', 'SGA_v2.0_scaffold118G32472' => 'sas', 'SGA_v2.0_scaffold14G07051' => 'sas', 'SGA_v2.0_scaffold183G39845' => 'sas', 'SGA_v2.0_scaffold1G00174' => 'sas', 'SGA_v2.0_scaffold22G09714' => 'sas', 'SGA_v2.0_scaffold333G48992' => 'sas', 'SGA_v2.0_scaffold46G17491' => 'sas', 'SGA_v2.0_scaffold49G18294' => 'sas', 'SGA_v2.0_scaffold63G21658' => 'sas', 'SHI01741' => 'shi', 'SHI05771' => 'shi', 'SHI18077' => 'shi', 'SHI20525' => 'shi', 'SHI20527' => 'shi', 'SHI20528' => 'shi', 'SMO172G0185' => 'smo', 'SMO198G0020' => 'smo', 'SMO351G0006' => 'smo', 'SMO356G0118' => 'smo', 'SMO358G0296' => 'smo', 'SMO367G0079' => 'smo', 'SMO367G1277' => 'smo', 'Solyc01g014220.3' => 'sly', 'Solyc01g111770.2' => 'sly', 'Solyc02g078180.3' => 'sly', 'Solyc03g006430.3' => 'sly', 'Solyc03g006456.1' => 'sly', 'Solyc03g079860.2' => 'sly', 'Solyc04g079770.3' => 'sly', 'Solyc05g007430.4' => 'sly', 'Solyc07g063150.3' => 'sly', 'Solyc08g016620.3' => 'sly', 'Solyc09g057590.3' => 'sly', 'Solyc09g057600.1' => 'sly', 'Solyc10g009050.3' => 'sly', 'Solyc11g017420.2' => 'sly', 'Sopen01g053810' => 'spe', 'Sopen02g023040' => 'spe', 'Sopen03g002440' => 'spe', 'Sopen04g033350' => 'spe', 'Sopen05g003310' => 'spe', 'Sopen07g004050' => 'spe', 'Sopen07g031340' => 'spe', 'Sopen08g006990' => 'spe', 'Sopen10g004830' => 'spe', 'Sopen11g009370' => 'spe', 'Sp1g24450' => 'spa', 'Sp1g29670' => 'spa', 'Sp1g39600' => 'spa', 'Sp2g11080' => 'spa', 'Sp2g13970' => 'spa', 'Sp4g16130' => 'spa', 'Sp6g13080' => 'spa', 'Sp7g37270' => 'spa', 'TAR371G0065' => 'tar', 'TAR376G0340' => 'tar', 'TAR376G0435' => 'tar', 'TAR381G0002' => 'tar', 'TAR381G1236' => 'tar', 'TAR624G0055' => 'tar', 'TAR624G0324' => 'tar', 'TAR624G0696' => 'tar', 'TAR624G0906' => 'tar', 'TAR625G0107' => 'tar', 'TAR626G0015' => 'tar', 'TAR626G1356' => 'tar', 'TAR627G0888' => 'tar', 'TAR628G0399' => 'tar', 'TAR628G1327' => 'tar', 'TAR629G2831' => 'tar', 'TAR629G2874' => 'tar', 'TAR633G1432' => 'tar', 'TAR633G2771' => 'tar', 'THA.LOC104803394' => 'tha', 'THA.LOC104805153' => 'tha', 'THA.LOC104806784' => 'tha', 'THA.LOC104810473' => 'tha', 'THA.LOC104813100' => 'tha', 'THA.LOC104814215' => 'tha', 'THA.LOC104815554' => 'tha', 'THA.LOC104820544' => 'tha', 'THA.LOC104824754' => 'tha', 'THA.LOC104827717' => 'tha', 'Thecc.02G031400' => 'tca', 'Thecc.02G055900' => 'tca', 'Thecc.02G350800' => 'tca', 'Thecc.06G150900' => 'tca', 'Thecc.06G186600' => 'tca', 'Thecc.07G089600' => 'tca', 'Thecc.08G020400' => 'tca', 'Thecc.08G182100' => 'tca', 'Thhalv10000873m.g' => 'esa', 'Thhalv10004185m.g' => 'esa', 'Thhalv10006981m.g' => 'esa', 'Thhalv10007204m.g' => 'esa', 'Thhalv10011374m.g' => 'esa', 'Thhalv10013482m.g' => 'esa', 'Thhalv10017801m.g' => 'esa', 'Thhalv10024983m.g' => 'esa', 'TPR.G12072' => 'tpr', 'TPR.G15769' => 'tpr', 'TPR.G16504' => 'tpr', 'TPR.G16506' => 'tpr', 'TPR.G24345' => 'tpr', 'TPR.G26666' => 'tpr', 'TPR.G27320' => 'tpr', 'TPR.G31819' => 'tpr', 'TPR.G38879' => 'tpr', 'TPR.G39015' => 'tpr', 'TPR.G8819' => 'tpr', 'TWI09G0924' => 'twi', 'TWI12G0811' => 'twi', 'TWI12G1294' => 'twi', 'TWI31G0150' => 'twi', 'TWI36G1262' => 'twi', 'TWI38G1287' => 'twi', 'TWI38G1633' => 'twi', 'TWI38G1982' => 'twi', 'TWI39G0116' => 'twi', 'TWI60G1011' => 'twi', 'TWI63G0171' => 'twi', 'TWI73G0839' => 'twi', 'TWI79G1511' => 'twi', 'unitig_0.g915' => 'ugi', 'unitig_0.g916' => 'ugi', 'unitig_21.g20219' => 'ugi', 'unitig_21.g20416' => 'ugi', 'unitig_578.g16132' => 'ugi', 'unitig_578.g16718' => 'ugi', 'unitig_62.g23481' => 'ugi', 'unitig_744.g24535' => 'ugi', 'unitig_749.g13525' => 'ugi', 'vmacro01248' => 'vma', 'vmacro02290' => 'vma', 'vmacro10946' => 'vma', 'vmacro11865' => 'vma', 'vmacro12493' => 'vma', 'vmacro17322' => 'vma', 'vmacro21599' => 'vma', 'vmacro23041' => 'vma', 'VMungo0251G0004' => 'vmu', 'VMungo0251G2639' => 'vmu', 'VMungo0251G2967' => 'vmu', 'VMungo0540G0864' => 'vmu', 'VMungo0540G1569' => 'vmu', 'VMungo0647G0317' => 'vmu', 'VMungo0720G1373' => 'vmu', 'VMungo0720G1508' => 'vmu', 'VMungo1080G0485' => 'vmu', 'VMungo1215G3177' => 'vmu', 'Zm00001eb112600' => 'zma', 'Zm00001eb120220' => 'zma', 'Zm00001eb153240' => 'zma', 'Zm00001eb168880' => 'zma', 'Zm00001eb213920' => 'zma', 'Zm00001eb228280' => 'zma', 'Zm00001eb254580' => 'zma', 'Zm00001eb272180' => 'zma', 'Zm00001eb293190' => 'zma', 'Zm00001eb322930' => 'zma', 'Zm00001eb353360' => 'zma', 'Zm00001eb353390' => 'zma', 'Zm00001eb353430' => 'zma', 'Zm00001eb353440' => 'zma', 'Zm00001eb353780' => 'zma' ) $gf_id = 'HOM05D000499' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000499' ) $data_identifier = 'HOM05D000499' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 29, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 12, 'amhyb' => (int) 8, 'aly' => (int) 12, 'aox' => (int) 9, 'arhy' => (int) 26, 'ath' => (int) 8, 'atr' => (int) 7, 'acertr' => (int) 10, 'cqu' => (int) 15, 'bca' => (int) 29, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 11, 'cansat' => (int) 8, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 9, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 8, 'cpa' => (int) 10, 'csa' => (int) 7, 'camsi' => (int) 20, 'dca' => (int) 8, 'din' => (int) 12, 'dzi' => (int) 14, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 6, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 38, 'gra' => (int) 16, 'vvi' => (int) 8, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 5, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 11, 'lja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 11, 'mpo' => (int) 3, 'mbi' => (int) 14, 'mdo' => (int) 14, 'mtr' => (int) 8, 'cme' => (int) 9, 'egut' => (int) 9, 'ama' => (int) 11, 'nta' => (int) 17, 'nnu' => (int) 11, 'oeu' => (int) 18, 'osa' => (int) 8, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 6, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 9, 'rsi' => (int) 9, 'sbr' => (int) 10, 'sbo' => (int) 8, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 10, 'sas' => (int) 10, 'shi' => (int) 6, 'smo' => (int) 7, 'sly' => (int) 14, 'spe' => (int) 10, 'spa' => (int) 8, 'tar' => (int) 19, 'tha' => (int) 10, 'tca' => (int) 8, 'esa' => (int) 8, 'tpr' => (int) 11, 'twi' => (int) 13, 'ugi' => (int) 9, 'vma' => (int) 8, 'vmu' => (int) 10, 'zma' => (int) 15 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb353780' $species_info = array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ) $local_species = 'sly' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000499', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1066', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p29780' => 'bna', 'A02p33180' => 'bna', 'A03p16470' => 'bna', 'A03p66010' => 'bna', 'A04p25970' => 'bna', 'A06p01270' => 'bna', 'A06p46080' => 'bna', 'A07p11400' => 'bna', 'A08p01840' => 'bna', 'A08p08230' => 'bna', 'A08p25740' => 'bna', 'A09p32070' => 'bna', 'A09p37830' => 'bna', 'A09p42840' => 'bna', 'A09p42850' => 'bna', 'Aa31LG10G2060' => 'aar', 'Aa31LG2G7410' => 'aar', 'Aa31LG6G10200' => 'aar', 'Aa31LG6G16680' => 'aar', 'Aa31LG6G8470' => 'aar', 'Aa31LG9G12730' => 'aar', 'Aa31LG9G13680' => 'aar', 'Aa31LG9G14920' => 'aar', 'Aa31LG9G6650' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4977' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5467' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3254' => 'aag', 'Actinidia02578' => 'ach', 'Actinidia07693' => 'ach', 'Actinidia08413' => 'ach', 'Actinidia08414' => 'ach', 'Actinidia15289' => 'ach', 'Actinidia19871' => 'ach', 'Actinidia21475' => 'ach', 'Actinidia22576' => 'ach', 'Actinidia28327' => 'ach', 'Actinidia32491' => 'ach', 'Actinidia39463' => 'ach', 'Actinidia39571' => 'ach', 'Ah.01g013750' => 'amhyb', 'Ah.01g023210' => 'amhyb', 'Ah.04g164850' => 'amhyb', 'Ah.05g178060' => 'amhyb', 'Ah.07g204270' => 'amhyb', 'Ah.07g208480' => 'amhyb', 'Ah.09g237410' => 'amhyb', 'Ah.14g089460' => 'amhyb', 'AL1G41790' => 'aly', 'AL1G49050' => 'aly', 'AL1G53810' => 'aly', 'AL1G61400' => 'aly', 'AL4G18580' => 'aly', 'AL5G12510' => 'aly', 'AL5G12540' => 'aly', 'AL6G43230' => 'aly', 'AL7G10370' => 'aly', 'AL7G19250' => 'aly', 'AL8G12240' => 'aly', 'AL8G18540' => 'aly', 'Aqoxy1G02409' => 'aox', 'Aqoxy2G03993' => 'aox', 'Aqoxy3G03357' => 'aox', 'Aqoxy4G00785' => 'aox', 'Aqoxy5G02598' => 'aox', 'Aqoxy6G00132' => 'aox', 'Aqoxy7G01776' => 'aox', 'Aqoxy7G02316' => 'aox', 'Aqoxy7G03973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.12AFKW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B8730' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27IQR1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3F75VG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3RE0GA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41TCQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.527VTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FIR39' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5W8UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DA38EV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ63HS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H1I32C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HC27T5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4M8AP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7N3CZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9UVDZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LS1NQA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT1D4B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SKC4TM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCFV76' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF9Q1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQWD9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1ZM88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WE07RT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YCK7VH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJE6Q6' => 'arhy', 'AT1G28240' => 'ath', 'AT1G34550' => 'ath', 'AT1G53040' => 'ath', 'AT2G02910' => 'ath', 'AT4G09630' => 'ath', 'AT4G38500' => 'ath', 'AT5G42660' => 'ath', 'AT5G46220' => 'ath', 'ATR0152G026' => 'atr', 'ATR0564G343' => 'atr', 'ATR0706G151' => 'atr', 'ATR0733G207' => 'atr', 'ATR0751G234' => 'atr', 'ATR0807G048' => 'atr', 'ATR1091G084' => 'atr', 'Atru.chr10.1229' => 'acertr', 'Atru.chr10.1230' => 'acertr', 'Atru.chr10.1874' => 'acertr', 'Atru.chr11.1808' => 'acertr', 'Atru.chr13.1795' => 'acertr', 'Atru.chr13.570' => 'acertr', 'Atru.chr2.2608' => 'acertr', 'Atru.chr2.2609' => 'acertr', 'Atru.chr5.3428' => 'acertr', 'Atru.chr8.1171' => 'acertr', 'AUR62004651' => 'cqu', 'AUR62008675' => 'cqu', 'AUR62010014' => 'cqu', 'AUR62013004' => 'cqu', 'AUR62014825' => 'cqu', 'AUR62015015' => 'cqu', 'AUR62015151' => 'cqu', 'AUR62017020' => 'cqu', 'AUR62019422' => 'cqu', 'AUR62023570' => 'cqu', 'AUR62025571' => 'cqu', 'AUR62029098' => 'cqu', 'AUR62033863' => 'cqu', 'AUR62034296' => 'cqu', 'AUR62040075' => 'cqu', 'BcaB02g07334' => 'bca', 'BcaB02g10575' => 'bca', 'BcaB03g12119' => 'bca', 'BcaB03g12120' => 'bca', 'BcaB03g13945' => 'bca', 'BcaB04g17123' => 'bca', 'BcaB04g17867' => 'bca', 'BcaB04g19839' => 'bca', 'BcaB07g30317' => 'bca', 'BcaB07g32432' => 'bca', 'BcaB07g33362' => 'bca', 'BcaB08g36611' => 'bca', 'BcaC01g00028' => 'bca', 'BcaC01g01356' => 'bca', 'BcaC01g02034' => 'bca', 'BcaC01g06051' => 'bca', 'BcaC03g16839' => 'bca', 'BcaC03g17176' => 'bca', 'BcaC05g26829' => 'bca', 'BcaC06g31490' => 'bca', 'BcaC06g35344' => 'bca', 'BcaC06g36570' => 'bca', 'BcaC07g37537' => 'bca', 'BcaC08g43491' => 'bca', 'BcaC08g43773' => 'bca', 'BcaNung00234' => 'bca', 'BcaNung01982' => 'bca', 'BcaNung03707' => 'bca', 'BcaNung06454' => 'bca', 'BolC2t10762H' => 'bol', 'BolC2t11191H' => 'bol', 'BolC3t14322H' => 'bol', 'BolC3t19747H' => 'bol', 'BolC3t21425H' => 'bol', 'BolC4t27800H' => 'bol', 'BolC5t31423H' => 'bol', 'BolC6t35951H' => 'bol', 'BolC6t36282H' => 'bol', 'BolC7t40678H' => 'bol', 'BolC7t40679H' => 'bol', 'BolC7t42222H' => 'bol', 'BolC7t43492H' => 'bol', 'BolC7t46785H' => 'bol', 'BolC8t47853H' => 'bol', 'BolC9t56805H' => 'bol', 'BraA02t08000Z' => 'bra', 'BraA02t08341Z' => 'bra', 'BraA03t10936Z' => 'bra', 'BraA03t15657Z' => 'bra', 'BraA04t18100Z' => 'bra', 'BraA05t20523Z' => 'bra', 'BraA06t23353Z' => 'bra', 'BraA06t27473Z' => 'bra', 'BraA06t27769Z' => 'bra', 'BraA07t28928Z' => 'bra', 'BraA08t32236Z' => 'bra', 'BraA08t32841Z' => 'bra', 'BraA08t34524Z' => 'bra', 'BraA09t38742Z' => 'bra', 'BraA09t39295Z' => 'bra', 'C02p47180' => 'bna', 'C02p50990' => 'bna', 'C03p19360' => 'bna', 'C03p74950' => 'bna', 'C03p91000' => 'bna', 'C04p63260' => 'bna', 'C05p27050' => 'bna', 'C06p08750' => 'bna', 'C06p11490' => 'bna', 'C07p02820' => 'bna', 'C07p17180' => 'bna', 'C07p29440' => 'bna', 'C07p63730' => 'bna', 'C09p39260' => 'bna', 'CAN.G1164.34' => 'can', 'CAN.G1164.39' => 'can', 'CAN.G1530.3' => 'can', 'CAN.G162.61' => 'can', 'CAN.G176.6' => 'can', 'CAN.G289.49' => 'can', 'CAN.G370.21' => 'can', 'CAN.G370.22' => 'can', 'CAN.G371.117' => 'can', 'CAN.G58.37' => 'can', 'CAN.G588.98' => 'can', 'CANSAT21G2266' => 'cansat', 'CANSAT25G2799' => 'cansat', 'CANSAT35G0862' => 'cansat', 'CANSAT35G1704' => 'cansat', 'CANSAT35G1760' => 'cansat', 'CANSAT56G3971' => 'cansat', 'CANSAT56G4116' => 'cansat', 'CANSAT80G1259' => 'cansat', 'CARHR027730' => 'chi', 'CARHR033880' => 'chi', 'CARHR043270' => 'chi', 'CARHR145330' => 'chi', 'CARHR145340' => 'chi', 'CARHR175570' => 'chi', 'CARHR181570' => 'chi', 'CARHR258470' => 'chi', 'CARHR260490' => 'chi', 'CARHR294220' => 'chi', 'Carub.0001s2668' => 'cru', 'Carub.0001s3257' => 'cru', 'Carub.0001s4220' => 'cru', 'Carub.0005s0179' => 'cru', 'Carub.0006s2807' => 'cru', 'Carub.0007s0039' => 'cru', 'Carub.0008s0169' => 'cru', 'Carub.0008s0636' => 'cru', 'Ca_00338_v3' => 'car', 'Ca_00542_v3' => 'car', 'Ca_01844_v3' => 'car', 'Ca_10611_v3' => 'car', 'Ca_13326_v3' => 'car', 'Ca_17944_v3' => 'car', 'Ca_18546_v3' => 'car', 'Ca_24219_v3' => 'car', 'Ca_29972_v3' => 'car', 'CBR_g3681' => 'cbr', 'CBR_g40021' => 'cbr', 'Cc01_g08140' => 'ccan', 'Cc02_g13410' => 'ccan', 'Cc02_g37480' => 'ccan', 'Cc05_g12030' => 'ccan', 'Cc09_g03370' => 'ccan', 'Cc09_g10300' => 'ccan', 'Cc10_g03530' => 'ccan', 'Cc10_g11380' => 'ccan', 'CDE01G0176' => 'cde', 'CDE02G0675' => 'cde', 'CDE02G0942' => 'cde', 'CDE02G1153' => 'cde', 'CDE02G4177' => 'cde', 'CDE04G2117' => 'cde', 'CDE04G2736' => 'cde', 'CDE08G1161' => 'cde', 'CDE09G1238' => 'cde', 'Cfa000467' => 'cfa', 'Cfa000947' => 'cfa', 'Cfa004969' => 'cfa', 'Cfa005284' => 'cfa', 'Cfa008993' => 'cfa', 'Cfa018187' => 'cfa', 'Cfa018454' => 'cfa', 'Cfa020585' => 'cfa', 'Ciclev10000424m.g' => 'ccl', 'Ciclev10003605m.g' => 'ccl', 'Ciclev10007828m.g' => 'ccl', 'Ciclev10014620m.g' => 'ccl', 'Ciclev10015169m.g' => 'ccl', 'Ciclev10018291m.g' => 'ccl', 'Ciclev10028256m.g' => 'ccl', 'Ciclev10033822m.g' => 'ccl', 'CiPaw.05G060300' => 'cil', 'CiPaw.05G085000' => 'cil', 'CiPaw.06G083700' => 'cil', 'CiPaw.06G120300' => 'cil', 'CiPaw.09G060500' => 'cil', 'CiPaw.09G123800' => 'cil', 'CiPaw.11G169700' => 'cil', 'CiPaw.12G118300' => 'cil', 'CiPaw.15G071000' => 'cil', 'CiPaw.15G081900' => 'cil', 'ClCG01G024610' => 'cla', 'ClCG03G006070' => 'cla', 'ClCG05G019250' => 'cla', 'ClCG09G009500' => 'cla', 'ClCG11G008200' => 'cla', 'ClCG11G018080' => 'cla', 'COL.COLO4_17373' => 'col', 'COL.COLO4_22994' => 'col', 'COL.COLO4_26389' => 'col', 'COL.COLO4_27170' => 'col', 'COL.COLO4_31074' => 'col', 'COL.COLO4_31465' => 'col', 'COL.COLO4_36438' => 'col', 'COL.COLO4_36439' => 'col', 'Cpa.g.c38781' => 'cpa', 'Cpa.g.sc128.12' => 'cpa', 'Cpa.g.sc166.7' => 'cpa', 'Cpa.g.sc166.8' => 'cpa', 'Cpa.g.sc20.111' => 'cpa', 'Cpa.g.sc27.31' => 'cpa', 'Cpa.g.sc64.36' => 'cpa', 'Cpa.g.sc64.37' => 'cpa', 'Cpa.g.sc66.49' => 'cpa', 'Cpa.g.sc80.64' => 'cpa', 'CsaV3_1G012320' => 'csa', 'CsaV3_2G008480' => 'csa', 'CsaV3_2G033450' => 'csa', 'CsaV3_3G044830' => 'csa', 'CsaV3_4G033710' => 'csa', 'CsaV3_6G051730' => 'csa', 'CsaV3_7G025350' => 'csa', 'CSS0001067' => 'camsi', 'CSS0005996' => 'camsi', 'CSS0006590' => 'camsi', 'CSS0009673' => 'camsi', 'CSS0010201' => 'camsi', 'CSS0010549' => 'camsi', 'CSS0011364' => 'camsi', 'CSS0014473' => 'camsi', 'CSS0014961' => 'camsi', 'CSS0020191' => 'camsi', 'CSS0021165' => 'camsi', 'CSS0022306' => 'camsi', 'CSS0030591' => 'camsi', 'CSS0030696' => 'camsi', 'CSS0032653' => 'camsi', 'CSS0037487' => 'camsi', 'CSS0041102' => 'camsi', 'CSS0041261' => 'camsi', 'CSS0046246' => 'camsi', 'CSS0049256' => 'camsi', 'DCAR_004075' => 'dca', 'DCAR_011538' => 'dca', 'DCAR_019553' => 'dca', 'DCAR_020952' => 'dca', 'DCAR_021739' => 'dca', 'DCAR_027407' => 'dca', 'DCAR_027913' => 'dca', 'DCAR_028066' => 'dca', 'Dinv05899' => 'din', 'Dinv07563' => 'din', 'Dinv08010' => 'din', 'Dinv14125' => 'din', 'Dinv20172' => 'din', 'Dinv30743' => 'din', 'Dinv31229' => 'din', 'Dinv34162' => 'din', 'Dinv36028' => 'din', 'Dinv39368' => 'din', 'Dinv40565' => 'din', 'Dinv41706' => 'din', 'Duzib052G0089' => 'dzi', 'Duzib116G0641' => 'dzi', 'Duzib132G0069' => 'dzi', 'Duzib132G1219' => 'dzi', 'Duzib147G0278' => 'dzi', 'Duzib160G0480' => 'dzi', 'Duzib170G0661' => 'dzi', 'Duzib177G0591' => 'dzi', 'Duzib187G1353' => 'dzi', 'Duzib192G0858' => 'dzi', 'Duzib192G0883' => 'dzi', 'Duzib213G0506' => 'dzi', 'Duzib235G0289' => 'dzi', 'Duzib251G0422' => 'dzi', 'ECA232G3898' => 'eca', 'ECA233G5950' => 'eca', 'ECA234G1699' => 'eca', 'ECA234G2421' => 'eca', 'ECA236G0426' => 'eca', 'ECA236G4331' => 'eca', 'ECA248G2573' => 'eca', 'EL10Ac1g00077' => 'bvu', 'EL10Ac1g01746' => 'bvu', 'EL10Ac2g03464' => 'bvu', 'EL10Ac4g08176' => 'bvu', 'EL10Ac7g17521' => 'bvu', 'EL10Ac8g20386' => 'bvu', 'EL10Ac9g21343' => 'bvu', 'EL10Ac9g22688' => 'bvu', 'Eucgr.B03434' => 'egr', 'Eucgr.D00618' => 'egr', 'Eucgr.E02395' => 'egr', 'Eucgr.F01129' => 'egr', 'Eucgr.F02622' => 'egr', 'Eucgr.F04207' => 'egr', 'FAN01G0570' => 'fan', 'FAN03G3351' => 'fan', 'FAN06G3702' => 'fan', 'FAN07G2149' => 'fan', 'FAN10G3758' => 'fan', 'FAN11G1170' => 'fan', 'FAN11G2050' => 'fan', 'FAN11G2724' => 'fan', 'FAN12G1700' => 'fan', 'FAN12G2028' => 'fan', 'FAN15G1160' => 'fan', 'FAN15G3063' => 'fan', 'FAN16G2540' => 'fan', 'FAN16G3077' => 'fan', 'FAN16G3624' => 'fan', 'FAN17G0221' => 'fan', 'FAN20G2492' => 'fan', 'FAN20G2905' => 'fan', 'FAN21G0548' => 'fan', 'FAN21G1300' => 'fan', 'FAN22G0077' => 'fan', 'FAN22G1315' => 'fan', 'FAN24G1280' => 'fan', 'FAN24G1445' => 'fan', 'FAN24G3527' => 'fan', 'FAN25G0464' => 'fan', 'FAN25G2885' => 'fan', 'FAN25G3270' => 'fan', 'FAN27G1101' => 'fan', 'FAN27G2846' => 'fan', 'FAN27G3524' => 'fan', 'FvH4_2g11770' => 'fve', 'FvH4_2g15630' => 'fve', 'FvH4_3g05570' => 'fve', 'FvH4_3g09110' => 'fve', 'FvH4_3g19940' => 'fve', 'FvH4_4g04821' => 'fve', 'FvH4_4g31480' => 'fve', 'FvH4_7g01740' => 'fve', 'Glyma.05G130400' => 'gma', 'Glyma.05G156400' => 'gma', 'Glyma.07G197000' => 'gma', 'Glyma.08G085151' => 'gma', 'Glyma.08G114500' => 'gma', 'Glyma.08G300400' => 'gma', 'Glyma.10G215800' => 'gma', 'Glyma.12G224400' => 'gma', 'Glyma.13G179300' => 'gma', 'Glyma.13G218151' => 'gma', 'Glyma.13G238800' => 'gma', 'Glyma.13G276900' => 'gma', 'Glyma.14G078200' => 'gma', 'Glyma.15G074500' => 'gma', 'Glyma.15G094100' => 'gma', 'Glyma.17G247200' => 'gma', 'Glyma.18G120100' => 'gma', 'Glyma.20G176000' => 'gma', 'Gohir.A01G063600' => 'ghi', 'Gohir.A01G170301' => 'ghi', 'Gohir.A02G060500' => 'ghi', 'Gohir.A05G133850' => 'ghi', 'Gohir.A05G161400' => 'ghi', 'Gohir.A06G012900' => 'ghi', 'Gohir.A06G035901' => 'ghi', 'Gohir.A06G127100' => 'ghi', 'Gohir.A06G210500' => 'ghi', 'Gohir.A08G008650' => 'ghi', 'Gohir.A09G072700' => 'ghi', 'Gohir.A09G088301' => 'ghi', 'Gohir.A10G040600' => 'ghi', 'Gohir.A12G036300' => 'ghi', 'Gohir.A12G143350' => 'ghi', 'Gohir.A12G165500' => 'ghi', 'Gohir.A13G145700' => 'ghi', 'Gohir.D01G050000' => 'ghi', 'Gohir.D01G051366' => 'ghi', 'Gohir.D01G161350' => 'ghi', 'Gohir.D02G065900' => 'ghi', 'Gohir.D05G164200' => 'ghi', 'Gohir.D05G355500' => 'ghi', 'Gohir.D06G010400' => 'ghi', 'Gohir.D06G111250' => 'ghi', 'Gohir.D06G132000' => 'ghi', 'Gohir.D06G210500' => 'ghi', 'Gohir.D07G165675' => 'ghi', 'Gohir.D08G062240' => 'ghi', 'Gohir.D08G086101' => 'ghi', 'Gohir.D08G138060' => 'ghi', 'Gohir.D09G072300' => 'ghi', 'Gohir.D10G041400' => 'ghi', 'Gohir.D11G191020' => 'ghi', 'Gohir.D11G212066' => 'ghi', 'Gohir.D12G036300' => 'ghi', 'Gohir.D12G168600' => 'ghi', 'Gohir.D13G150600' => 'ghi', 'Gorai.001G057300' => 'gra', 'Gorai.002G069900' => 'gra', 'Gorai.002G200000' => 'gra', 'Gorai.003G067600' => 'gra', 'Gorai.005G074800' => 'gra', 'Gorai.006G087300' => 'gra', 'Gorai.008G037500' => 'gra', 'Gorai.008G181400' => 'gra', 'Gorai.009G169400' => 'gra', 'Gorai.009G387900' => 'gra', 'Gorai.010G013300' => 'gra', 'Gorai.010G153800' => 'gra', 'Gorai.010G255800' => 'gra', 'Gorai.011G043700' => 'gra', 'Gorai.011G198900' => 'gra', 'Gorai.013G168400' => 'gra', 'GSVIVG01005212001' => 'vvi', 'GSVIVG01006163001' => 'vvi', 'GSVIVG01009625001' => 'vvi', 'GSVIVG01014338001' => 'vvi', 'GSVIVG01020005001' => 'vvi', 'GSVIVG01021450001' => 'vvi', 'GSVIVG01023975001' => 'vvi', 'GSVIVG01034490001' => 'vvi', 'HanXRQChr04g0112071' => 'han', 'HanXRQChr05g0131151' => 'han', 'HanXRQChr09g0262371' => 'han', 'HanXRQChr09g0268401' => 'han', 'HanXRQChr10g0279241' => 'han', 'HanXRQChr10g0297961' => 'han', 'HanXRQChr11g0326231' => 'han', 'HanXRQChr11g0328471' => 'han', 'HanXRQChr16g0507941' => 'han', 'HanXRQChr17g0560211' => 'han', 'Haze_02108' => 'cav', 'Haze_02428' => 'cav', 'Haze_05593' => 'cav', 'Haze_06448' => 'cav', 'Haze_09427' => 'cav', 'Haze_12022' => 'cav', 'Haze_17612' => 'cav', 'Haze_17928' => 'cav', 'Hma1.2p1_0032F.1_g019250' => 'hma', 'Hma1.2p1_0163F.1_g072690' => 'hma', 'Hma1.2p1_0265F.1_g106710' => 'hma', 'Hma1.2p1_0286F.1_g113970' => 'hma', 'Hma1.2p1_0363F.1_g136640' => 'hma', 'Hma1.2p1_0584F.1_g183470' => 'hma', 'Hma1.2p1_0885F.1_g232570' => 'hma', 'HPP92_006022' => 'vpl', 'HPP92_007320' => 'vpl', 'HPP92_011521' => 'vpl', 'HPP92_019387' => 'vpl', 'HPP92_024038' => 'vpl', 'Hund05891' => 'sun', 'Hund06450' => 'sun', 'Hund12053' => 'sun', 'Hund16800' => 'sun', 'Hund21222' => 'sun', 'Hund22896' => 'sun', 'Hund23746' => 'sun', 'Hund27083' => 'sun', 'Lalb_Chr02g0141831' => 'lal', 'Lalb_Chr02g0141841' => 'lal', 'Lalb_Chr05g0220411' => 'lal', 'Lalb_Chr06g0162081' => 'lal', 'Lalb_Chr09g0327651' => 'lal', 'Lalb_Chr13g0295051' => 'lal', 'Lalb_Chr15g0086801' => 'lal', 'Lalb_Chr16g0383781' => 'lal', 'Lalb_Chr16g0383791' => 'lal', 'Lalb_Chr18g0055441' => 'lal', 'Lalb_Chr18g0059611' => 'lal', 'Lalb_Chr20g0109661' => 'lal', 'Lalb_Chr20g0109831' => 'lal', 'Lalb_Chr20g0121871' => 'lal', 'Lalb_Chr22g0355361' => 'lal', 'Lalb_Chr25g0286371' => 'lal', 'Lj1A1187G43' => 'lonja', 'Lj1A1205T50' => 'lonja', 'Lj1A800G33' => 'lonja', 'Lj1C1187T7' => 'lonja', 'Lj1C843T11' => 'lonja', 'Lj1g0010940' => 'lja', 'Lj2A288T69' => 'lonja', 'Lj3g0024276' => 'lja', 'Lj4A47T76' => 'lonja', 'Lj4g0005805' => 'lja', 'Lj4g0006097' => 'lja', 'Lj4g0008528' => 'lja', 'Lj4g0024907' => 'lja', 'Lj5g0012472' => 'lja', 'Lj5g0018648' => 'lja', 'Lj6C789G1' => 'lonja', 'Lj6g0004000' => 'lja', 'Lj7A292G67' => 'lonja', 'Lj7A292T64' => 'lonja', 'Lj9A400T58' => 'lonja', 'Lsat_1_v5_gn_1_126181' => 'lsa', 'Lsat_1_v5_gn_4_123041' => 'lsa', 'Lsat_1_v5_gn_4_133620' => 'lsa', 'Lsat_1_v5_gn_4_53221' => 'lsa', 'Lsat_1_v5_gn_4_71961' => 'lsa', 'Lsat_1_v5_gn_7_105241' => 'lsa', 'Lsat_1_v5_gn_7_21361' => 'lsa', 'Lsat_1_v5_gn_7_28860' => 'lsa', 'Lsat_1_v5_gn_7_31260' => 'lsa', 'Lsat_1_v5_gn_8_52801' => 'lsa', 'Manes.02G191400' => 'mes', 'Manes.03G110100' => 'mes', 'Manes.04G071100' => 'mes', 'Manes.05G100500' => 'mes', 'Manes.05G164700' => 'mes', 'Manes.15G087000' => 'mes', 'Manes.15G121500' => 'mes', 'Manes.16G028300' => 'mes', 'Manes.17G046100' => 'mes', 'Manes.17G069800' => 'mes', 'Manes.18G100500' => 'mes', 'Mapoly0002s0109' => 'mpo', 'Mapoly0024s0007' => 'mpo', 'Mapoly0089s0032' => 'mpo', 'MBI04_g42241_MAGBIO' => 'mbi', 'MBI05_g11988_MAGBIO' => 'mbi', 'MBI05_g35452_MAGBIO' => 'mbi', 'MBI07_g30179_MAGBIO' => 'mbi', 'MBI07_g35859_MAGBIO' => 'mbi', 'MBI07_g35860_MAGBIO' => 'mbi', 'MBI07_g37166_MAGBIO' => 'mbi', 'MBI08_g18172_MAGBIO' => 'mbi', 'MBI09_g08441_MAGBIO' => 'mbi', 'MBI13_g01676_MAGBIO' => 'mbi', 'MBI14_g42955_MAGBIO' => 'mbi', 'MBI16_g13161_MAGBIO' => 'mbi', 'MBI17_g27204_MAGBIO' => 'mbi', 'MBI19_g21595_MAGBIO' => 'mbi', 'MD00G1148400' => 'mdo', 'MD02G1301200' => 'mdo', 'MD03G1227800' => 'mdo', 'MD05G1041100' => 'mdo', 'MD05G1124800' => 'mdo', 'MD05G1284000' => 'mdo', 'MD05G1338800' => 'mdo', 'MD05G1338900' => 'mdo', 'MD07G1022800' => 'mdo', 'MD10G1047500' => 'mdo', 'MD10G1127500' => 'mdo', 'MD10G1262300' => 'mdo', 'MD10G1293800' => 'mdo', 'MD16G1074300' => 'mdo', 'Medtr1g021670' => 'mtr', 'Medtr1g096320' => 'mtr', 'Medtr2g013690' => 'mtr', 'Medtr2g019450' => 'mtr', 'Medtr2g085170' => 'mtr', 'Medtr4g088785' => 'mtr', 'Medtr8g055930' => 'mtr', 'Medtr8g085850' => 'mtr', 'MELO3C002605.2' => 'cme', 'MELO3C003891.2' => 'cme', 'MELO3C004012.2' => 'cme', 'MELO3C007134.2' => 'cme', 'MELO3C008118.2' => 'cme', 'MELO3C016700.2' => 'cme', 'MELO3C024127.2' => 'cme', 'MELO3C033361.2' => 'cme', 'MELO3C033362.2' => 'cme', 'Migut.C00430' => 'egut', 'Migut.C01246' => 'egut', 'Migut.E00101' => 'egut', 'Migut.H01486' => 'egut', 'Migut.H01939' => 'egut', 'Migut.K00360' => 'egut', 'Migut.M00910' => 'egut', 'Migut.M01139' => 'egut', 'Migut.N02677' => 'egut', 'MSTRG.13252' => 'ama', 'MSTRG.14701' => 'ama', 'MSTRG.1521' => 'ama', 'MSTRG.15884' => 'ama', 'MSTRG.16242' => 'ama', 'MSTRG.22285' => 'ama', 'MSTRG.22444' => 'ama', 'MSTRG.2349' => 'ama', 'MSTRG.26308' => 'ama', 'MSTRG.28296' => 'ama', 'MSTRG.9895' => 'ama', 'Nitab4.5_0000110g0060' => 'nta', 'Nitab4.5_0000420g0130' => 'nta', 'Nitab4.5_0000422g0030' => 'nta', 'Nitab4.5_0000560g0180' => 'nta', 'Nitab4.5_0000703g0100' => 'nta', 'Nitab4.5_0000786g0200' => 'nta', 'Nitab4.5_0001336g0020' => 'nta', 'Nitab4.5_0001796g0030' => 'nta', 'Nitab4.5_0003348g0060' => 'nta', 'Nitab4.5_0003698g0040' => 'nta', 'Nitab4.5_0003942g0090' => 'nta', 'Nitab4.5_0004775g0070' => 'nta', 'Nitab4.5_0004864g0030' => 'nta', 'Nitab4.5_0005615g0020' => 'nta', 'Nitab4.5_0009288g0030' => 'nta', 'Nitab4.5_0009341g0010' => 'nta', 'Nitab4.5_0009535g0010' => 'nta', 'Nn1g03995' => 'nnu', 'Nn1g04100' => 'nnu', 'Nn1g06530' => 'nnu', 'Nn3g16404' => 'nnu', 'Nn3g17212' => 'nnu', 'Nn3g20776' => 'nnu', 'Nn3g21923' => 'nnu', 'Nn5g27737' => 'nnu', 'Nn5g29461' => 'nnu', 'Nn7g38355' => 'nnu', 'Nn8g39873' => 'nnu', 'Oeu000548.2' => 'oeu', 'Oeu004672.1' => 'oeu', 'Oeu015605.2' => 'oeu', 'Oeu016092.1' => 'oeu', 'Oeu017879.3' => 'oeu', 'Oeu024910.1' => 'oeu', 'Oeu028965.1' => 'oeu', 'Oeu031269.1' => 'oeu', 'Oeu031270.1' => 'oeu', 'Oeu032535.1' => 'oeu', 'Oeu034151.1' => 'oeu', 'Oeu034152.1' => 'oeu', 'Oeu034588.2' => 'oeu', 'Oeu050846.1' => 'oeu', 'Oeu050849.2' => 'oeu', 'Oeu051063.2' => 'oeu', 'Oeu052368.1' => 'oeu', 'Oeu052370.1' => 'oeu', 'Os01g0210400' => 'osa', 'Os01g0304300' => 'osa', 'Os01g0749100' => 'osa', 'Os02g0745800' => 'osa', 'Os03g0769050' => 'osa', 'Os05g0531500' => 'osa', 'Os06g0724300' => 'osa', 'Os11g0198100' => 'osa', 'Peaxi162Scf00069g01425' => 'pax', 'Peaxi162Scf00280g00811' => 'pax', 'Peaxi162Scf00310g00615' => 'pax', 'Peaxi162Scf00362g00542' => 'pax', 'Peaxi162Scf00461g00310' => 'pax', 'Peaxi162Scf00530g00118' => 'pax', 'Peaxi162Scf00541g00057' => 'pax', 'Peaxi162Scf00661g00017' => 'pax', 'Peaxi162Scf00926g00027' => 'pax', 'Peaxi162Scf01064g00263' => 'pax', 'Peaxi162Scf01211g00135' => 'pax', 'PGR004G2336' => 'pgr', 'PGR042G0327' => 'pgr', 'PGR042G1957' => 'pgr', 'PGR042G2003' => 'pgr', 'PGR042G3929' => 'pgr', 'PGR083G1137' => 'pgr', 'PGR083G1364' => 'pgr', 'PGSC0003DMG400003381' => 'stu', 'PGSC0003DMG400003417' => 'stu', 'PGSC0003DMG400008981' => 'stu', 'PGSC0003DMG400012417' => 'stu', 'PGSC0003DMG400012823' => 'stu', 'PGSC0003DMG400016885' => 'stu', 'PGSC0003DMG400022812' => 'stu', 'PGSC0003DMG400029726' => 'stu', 'PGSC0003DMG401009243' => 'stu', 'PGSC0003DMG401031505' => 'stu', 'PGSC0003DMG402031505' => 'stu', 'Phvul.001G017600' => 'pvu', 'Phvul.002G193500' => 'pvu', 'Phvul.002G228900' => 'pvu', 'Phvul.002G236800' => 'pvu', 'Phvul.003G049500' => 'pvu', 'Phvul.005G072000' => 'pvu', 'Phvul.006G164800' => 'pvu', 'Phvul.006G185100' => 'pvu', 'Phvul.007G090000' => 'pvu', 'Potri.001G399800' => 'ptr', 'Potri.002G149900' => 'ptr', 'Potri.004G044100' => 'ptr', 'Potri.004G177600' => 'ptr', 'Potri.009G138000' => 'ptr', 'Potri.010G094000' => 'ptr', 'Potri.011G053000' => 'ptr', 'Potri.011G119300' => 'ptr', 'Potri.013G113700' => 'ptr', 'Potri.018G107800' => 'ptr', 'Potri.019G084100' => 'ptr', 'Pp3c14_23720' => 'ppa', 'Pp3c16_6340' => 'ppa', 'Pp3c23_13420' => 'ppa', 'Pp3c24_2740' => 'ppa', 'Pp3c25_860' => 'ppa', 'Pp3c8_21750' => 'ppa', 'Prupe.1G273000' => 'ppe', 'Prupe.1G273700' => 'ppe', 'Prupe.1G274100' => 'ppe', 'Prupe.2G023300' => 'ppe', 'Prupe.4G048000' => 'ppe', 'Prupe.4G080400' => 'ppe', 'Prupe.4G181200' => 'ppe', 'Prupe.8G056900' => 'ppe', 'Prupe.8G168700' => 'ppe', 'Psat1g189080' => 'psa', 'Psat1g204760' => 'psa', 'Psat4g175560' => 'psa', 'Psat4g177720' => 'psa', 'Psat5g244240' => 'psa', 'Psat6g010720' => 'psa', 'Psat6g187200' => 'psa', 'Psat7g072040' => 'psa', 'PSO017G3501' => 'pso', 'PSO063G2148' => 'pso', 'PSO063G5608' => 'pso', 'PSO210G6392' => 'pso', 'PSO541G2319' => 'pso', 'PSO541G2836' => 'pso', 'PSO541G4012' => 'pso', 'PSO541G6253' => 'pso', 'PSO675G0580' => 'pso', 'PSO675G0856' => 'pso', 'PSO675G5635' => 'pso', 'PSO675G9157' => 'pso', 'PSO832G1660' => 'pso', 'PSO832G1969' => 'pso', 'QL02p007186' => 'qlo', 'QL02p033904' => 'qlo', 'QL03p064391' => 'qlo', 'QL05p040593' => 'qlo', 'QL05p058242' => 'qlo', 'QL08p021825' => 'qlo', 'QL11p004981' => 'qlo', 'RcHm_v2.0_Chr1g0318301' => 'rch', 'RcHm_v2.0_Chr4g0418501' => 'rch', 'RcHm_v2.0_Chr4g0439971' => 'rch', 'RcHm_v2.0_Chr5g0008541' => 'rch', 'RcHm_v2.0_Chr5g0014101' => 'rch', 'RcHm_v2.0_Chr5g0014131' => 'rch', 'RcHm_v2.0_Chr5g0033621' => 'rch', 'RcHm_v2.0_Chr6g0272041' => 'rch', 'RcHm_v2.0_Chr6g0278831' => 'rch', 'Rhsim02G0130400' => 'rsi', 'Rhsim02G0171100' => 'rsi', 'Rhsim05G0053000' => 'rsi', 'Rhsim05G0053100' => 'rsi', 'Rhsim06G0096500' => 'rsi', 'Rhsim06G0096600' => 'rsi', 'Rhsim06G0199100' => 'rsi', 'Rhsim12G0062300' => 'rsi', 'Rhsim12G0062800' => 'rsi', 'Sabra02G0118600' => 'sbr', 'Sabra04G0027300' => 'sbr', 'Sabra04G0119500' => 'sbr', 'Sabra08G0112500' => 'sbr', 'Sabra11G0036800' => 'sbr', 'Sabra11G0103800' => 'sbr', 'Sabra13G0096300' => 'sbr', 'Sabra16G0262300' => 'sbr', 'Sabra18G0091700' => 'sbr', 'Sabra19G0095400' => 'sbr', 'SalBow6G3080' => 'sbo', 'SalBow7G1157' => 'sbo', 'SalBow7G2123' => 'sbo', 'SalBow7G2285' => 'sbo', 'SalBow7G3537' => 'sbo', 'SalBow8G2947' => 'sbo', 'SalBow8G4463' => 'sbo', 'SalBow8G5466' => 'sbo', 'Sc01g0001750' => 'sci', 'Sc02g0006640' => 'sci', 'Sc02g0006670' => 'sci', 'Sc04g0008220' => 'sci', 'Sc05g0006190' => 'sci', 'Sc08g0002760' => 'sci', 'Sc17g0006170' => 'sci', 'Sc22g0002050' => 'sci', 'Sc23g0001190' => 'sci', 'Sc24g0000980' => 'sci', 'Sed0006245' => 'sed', 'Sed0007543' => 'sed', 'Sed0009411' => 'sed', 'Sed0010765' => 'sed', 'Sed0012944' => 'sed', 'Sed0014682' => 'sed', 'Sed0016174' => 'sed', 'Sed0016796' => 'sed', 'Sed0020317' => 'sed', 'Sed0021467' => 'sed', 'SEGI_01316' => 'sgi', 'SEGI_03374' => 'sgi', 'SEGI_16265' => 'sgi', 'SEGI_18569' => 'sgi', 'SEGI_20351' => 'sgi', 'SEGI_26395' => 'sgi', 'SEGI_29469' => 'sgi', 'SEGI_34771' => 'sgi', 'SEGI_36769' => 'sgi', 'SEGI_37139' => 'sgi', 'SGA_v2.0_scaffold100G29687' => 'sas', 'SGA_v2.0_scaffold118G32472' => 'sas', 'SGA_v2.0_scaffold14G07051' => 'sas', 'SGA_v2.0_scaffold183G39845' => 'sas', 'SGA_v2.0_scaffold1G00174' => 'sas', 'SGA_v2.0_scaffold22G09714' => 'sas', 'SGA_v2.0_scaffold333G48992' => 'sas', 'SGA_v2.0_scaffold46G17491' => 'sas', 'SGA_v2.0_scaffold49G18294' => 'sas', 'SGA_v2.0_scaffold63G21658' => 'sas', 'SHI01741' => 'shi', 'SHI05771' => 'shi', 'SHI18077' => 'shi', 'SHI20525' => 'shi', 'SHI20527' => 'shi', 'SHI20528' => 'shi', 'SMO172G0185' => 'smo', 'SMO198G0020' => 'smo', 'SMO351G0006' => 'smo', 'SMO356G0118' => 'smo', 'SMO358G0296' => 'smo', 'SMO367G0079' => 'smo', 'SMO367G1277' => 'smo', 'Solyc01g014220.3' => 'sly', 'Solyc01g111770.2' => 'sly', 'Solyc02g078180.3' => 'sly', 'Solyc03g006430.3' => 'sly', 'Solyc03g006456.1' => 'sly', 'Solyc03g079860.2' => 'sly', 'Solyc04g079770.3' => 'sly', 'Solyc05g007430.4' => 'sly', 'Solyc07g063150.3' => 'sly', 'Solyc08g016620.3' => 'sly', 'Solyc09g057590.3' => 'sly', 'Solyc09g057600.1' => 'sly', 'Solyc10g009050.3' => 'sly', 'Solyc11g017420.2' => 'sly', 'Sopen01g053810' => 'spe', 'Sopen02g023040' => 'spe', 'Sopen03g002440' => 'spe', 'Sopen04g033350' => 'spe', 'Sopen05g003310' => 'spe', 'Sopen07g004050' => 'spe', 'Sopen07g031340' => 'spe', 'Sopen08g006990' => 'spe', 'Sopen10g004830' => 'spe', 'Sopen11g009370' => 'spe', 'Sp1g24450' => 'spa', 'Sp1g29670' => 'spa', 'Sp1g39600' => 'spa', 'Sp2g11080' => 'spa', 'Sp2g13970' => 'spa', 'Sp4g16130' => 'spa', 'Sp6g13080' => 'spa', 'Sp7g37270' => 'spa', 'TAR371G0065' => 'tar', 'TAR376G0340' => 'tar', 'TAR376G0435' => 'tar', 'TAR381G0002' => 'tar', 'TAR381G1236' => 'tar', 'TAR624G0055' => 'tar', 'TAR624G0324' => 'tar', 'TAR624G0696' => 'tar', 'TAR624G0906' => 'tar', 'TAR625G0107' => 'tar', 'TAR626G0015' => 'tar', 'TAR626G1356' => 'tar', 'TAR627G0888' => 'tar', 'TAR628G0399' => 'tar', 'TAR628G1327' => 'tar', 'TAR629G2831' => 'tar', 'TAR629G2874' => 'tar', 'TAR633G1432' => 'tar', 'TAR633G2771' => 'tar', 'THA.LOC104803394' => 'tha', 'THA.LOC104805153' => 'tha', 'THA.LOC104806784' => 'tha', 'THA.LOC104810473' => 'tha', 'THA.LOC104813100' => 'tha', 'THA.LOC104814215' => 'tha', 'THA.LOC104815554' => 'tha', 'THA.LOC104820544' => 'tha', 'THA.LOC104824754' => 'tha', 'THA.LOC104827717' => 'tha', 'Thecc.02G031400' => 'tca', 'Thecc.02G055900' => 'tca', 'Thecc.02G350800' => 'tca', 'Thecc.06G150900' => 'tca', 'Thecc.06G186600' => 'tca', 'Thecc.07G089600' => 'tca', 'Thecc.08G020400' => 'tca', 'Thecc.08G182100' => 'tca', 'Thhalv10000873m.g' => 'esa', 'Thhalv10004185m.g' => 'esa', 'Thhalv10006981m.g' => 'esa', 'Thhalv10007204m.g' => 'esa', 'Thhalv10011374m.g' => 'esa', 'Thhalv10013482m.g' => 'esa', 'Thhalv10017801m.g' => 'esa', 'Thhalv10024983m.g' => 'esa', 'TPR.G12072' => 'tpr', 'TPR.G15769' => 'tpr', 'TPR.G16504' => 'tpr', 'TPR.G16506' => 'tpr', 'TPR.G24345' => 'tpr', 'TPR.G26666' => 'tpr', 'TPR.G27320' => 'tpr', 'TPR.G31819' => 'tpr', 'TPR.G38879' => 'tpr', 'TPR.G39015' => 'tpr', 'TPR.G8819' => 'tpr', 'TWI09G0924' => 'twi', 'TWI12G0811' => 'twi', 'TWI12G1294' => 'twi', 'TWI31G0150' => 'twi', 'TWI36G1262' => 'twi', 'TWI38G1287' => 'twi', 'TWI38G1633' => 'twi', 'TWI38G1982' => 'twi', 'TWI39G0116' => 'twi', 'TWI60G1011' => 'twi', 'TWI63G0171' => 'twi', 'TWI73G0839' => 'twi', 'TWI79G1511' => 'twi', 'unitig_0.g915' => 'ugi', 'unitig_0.g916' => 'ugi', 'unitig_21.g20219' => 'ugi', 'unitig_21.g20416' => 'ugi', 'unitig_578.g16132' => 'ugi', 'unitig_578.g16718' => 'ugi', 'unitig_62.g23481' => 'ugi', 'unitig_744.g24535' => 'ugi', 'unitig_749.g13525' => 'ugi', 'vmacro01248' => 'vma', 'vmacro02290' => 'vma', 'vmacro10946' => 'vma', 'vmacro11865' => 'vma', 'vmacro12493' => 'vma', 'vmacro17322' => 'vma', 'vmacro21599' => 'vma', 'vmacro23041' => 'vma', 'VMungo0251G0004' => 'vmu', 'VMungo0251G2639' => 'vmu', 'VMungo0251G2967' => 'vmu', 'VMungo0540G0864' => 'vmu', 'VMungo0540G1569' => 'vmu', 'VMungo0647G0317' => 'vmu', 'VMungo0720G1373' => 'vmu', 'VMungo0720G1508' => 'vmu', 'VMungo1080G0485' => 'vmu', 'VMungo1215G3177' => 'vmu', 'Zm00001eb112600' => 'zma', 'Zm00001eb120220' => 'zma', 'Zm00001eb153240' => 'zma', 'Zm00001eb168880' => 'zma', 'Zm00001eb213920' => 'zma', 'Zm00001eb228280' => 'zma', 'Zm00001eb254580' => 'zma', 'Zm00001eb272180' => 'zma', 'Zm00001eb293190' => 'zma', 'Zm00001eb322930' => 'zma', 'Zm00001eb353360' => 'zma', 'Zm00001eb353390' => 'zma', 'Zm00001eb353430' => 'zma', 'Zm00001eb353440' => 'zma', 'Zm00001eb353780' => 'zma' ), 'gf_id' => 'HOM05D000499', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000499' ), 'data_identifier' => 'HOM05D000499', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000499', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1066', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p29780' => 'bna', 'A02p33180' => 'bna', 'A03p16470' => 'bna', 'A03p66010' => 'bna', 'A04p25970' => 'bna', 'A06p01270' => 'bna', 'A06p46080' => 'bna', 'A07p11400' => 'bna', 'A08p01840' => 'bna', 'A08p08230' => 'bna', 'A08p25740' => 'bna', 'A09p32070' => 'bna', 'A09p37830' => 'bna', 'A09p42840' => 'bna', 'A09p42850' => 'bna', 'Aa31LG10G2060' => 'aar', 'Aa31LG2G7410' => 'aar', 'Aa31LG6G10200' => 'aar', 'Aa31LG6G16680' => 'aar', 'Aa31LG6G8470' => 'aar', 'Aa31LG9G12730' => 'aar', 'Aa31LG9G13680' => 'aar', 'Aa31LG9G14920' => 'aar', 'Aa31LG9G6650' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4977' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5467' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3254' => 'aag', 'Actinidia02578' => 'ach', 'Actinidia07693' => 'ach', 'Actinidia08413' => 'ach', 'Actinidia08414' => 'ach', 'Actinidia15289' => 'ach', 'Actinidia19871' => 'ach', 'Actinidia21475' => 'ach', 'Actinidia22576' => 'ach', 'Actinidia28327' => 'ach', 'Actinidia32491' => 'ach', 'Actinidia39463' => 'ach', 'Actinidia39571' => 'ach', 'Ah.01g013750' => 'amhyb', 'Ah.01g023210' => 'amhyb', 'Ah.04g164850' => 'amhyb', 'Ah.05g178060' => 'amhyb', 'Ah.07g204270' => 'amhyb', 'Ah.07g208480' => 'amhyb', 'Ah.09g237410' => 'amhyb', 'Ah.14g089460' => 'amhyb', 'AL1G41790' => 'aly', 'AL1G49050' => 'aly', 'AL1G53810' => 'aly', 'AL1G61400' => 'aly', 'AL4G18580' => 'aly', 'AL5G12510' => 'aly', 'AL5G12540' => 'aly', 'AL6G43230' => 'aly', 'AL7G10370' => 'aly', 'AL7G19250' => 'aly', 'AL8G12240' => 'aly', 'AL8G18540' => 'aly', 'Aqoxy1G02409' => 'aox', 'Aqoxy2G03993' => 'aox', 'Aqoxy3G03357' => 'aox', 'Aqoxy4G00785' => 'aox', 'Aqoxy5G02598' => 'aox', 'Aqoxy6G00132' => 'aox', 'Aqoxy7G01776' => 'aox', 'Aqoxy7G02316' => 'aox', 'Aqoxy7G03973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.12AFKW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B8730' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27IQR1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3F75VG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3RE0GA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41TCQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.527VTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FIR39' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5W8UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DA38EV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ63HS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H1I32C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HC27T5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4M8AP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7N3CZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9UVDZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LS1NQA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT1D4B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SKC4TM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCFV76' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF9Q1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQWD9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1ZM88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WE07RT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YCK7VH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJE6Q6' => 'arhy', 'AT1G28240' => 'ath', 'AT1G34550' => 'ath', 'AT1G53040' => 'ath', 'AT2G02910' => 'ath', 'AT4G09630' => 'ath', 'AT4G38500' => 'ath', 'AT5G42660' => 'ath', 'AT5G46220' => 'ath', 'ATR0152G026' => 'atr', 'ATR0564G343' => 'atr', 'ATR0706G151' => 'atr', 'ATR0733G207' => 'atr', 'ATR0751G234' => 'atr', 'ATR0807G048' => 'atr', 'ATR1091G084' => 'atr', 'Atru.chr10.1229' => 'acertr', 'Atru.chr10.1230' => 'acertr', 'Atru.chr10.1874' => 'acertr', 'Atru.chr11.1808' => 'acertr', 'Atru.chr13.1795' => 'acertr', 'Atru.chr13.570' => 'acertr', 'Atru.chr2.2608' => 'acertr', 'Atru.chr2.2609' => 'acertr', 'Atru.chr5.3428' => 'acertr', 'Atru.chr8.1171' => 'acertr', 'AUR62004651' => 'cqu', 'AUR62008675' => 'cqu', 'AUR62010014' => 'cqu', 'AUR62013004' => 'cqu', 'AUR62014825' => 'cqu', 'AUR62015015' => 'cqu', 'AUR62015151' => 'cqu', 'AUR62017020' => 'cqu', 'AUR62019422' => 'cqu', 'AUR62023570' => 'cqu', 'AUR62025571' => 'cqu', 'AUR62029098' => 'cqu', 'AUR62033863' => 'cqu', 'AUR62034296' => 'cqu', 'AUR62040075' => 'cqu', 'BcaB02g07334' => 'bca', 'BcaB02g10575' => 'bca', 'BcaB03g12119' => 'bca', 'BcaB03g12120' => 'bca', 'BcaB03g13945' => 'bca', 'BcaB04g17123' => 'bca', 'BcaB04g17867' => 'bca', 'BcaB04g19839' => 'bca', 'BcaB07g30317' => 'bca', 'BcaB07g32432' => 'bca', 'BcaB07g33362' => 'bca', 'BcaB08g36611' => 'bca', 'BcaC01g00028' => 'bca', 'BcaC01g01356' => 'bca', 'BcaC01g02034' => 'bca', 'BcaC01g06051' => 'bca', 'BcaC03g16839' => 'bca', 'BcaC03g17176' => 'bca', 'BcaC05g26829' => 'bca', 'BcaC06g31490' => 'bca', 'BcaC06g35344' => 'bca', 'BcaC06g36570' => 'bca', 'BcaC07g37537' => 'bca', 'BcaC08g43491' => 'bca', 'BcaC08g43773' => 'bca', 'BcaNung00234' => 'bca', 'BcaNung01982' => 'bca', 'BcaNung03707' => 'bca', 'BcaNung06454' => 'bca', 'BolC2t10762H' => 'bol', 'BolC2t11191H' => 'bol', 'BolC3t14322H' => 'bol', 'BolC3t19747H' => 'bol', 'BolC3t21425H' => 'bol', 'BolC4t27800H' => 'bol', 'BolC5t31423H' => 'bol', 'BolC6t35951H' => 'bol', 'BolC6t36282H' => 'bol', 'BolC7t40678H' => 'bol', 'BolC7t40679H' => 'bol', 'BolC7t42222H' => 'bol', 'BolC7t43492H' => 'bol', 'BolC7t46785H' => 'bol', 'BolC8t47853H' => 'bol', 'BolC9t56805H' => 'bol', 'BraA02t08000Z' => 'bra', 'BraA02t08341Z' => 'bra', 'BraA03t10936Z' => 'bra', 'BraA03t15657Z' => 'bra', 'BraA04t18100Z' => 'bra', 'BraA05t20523Z' => 'bra', 'BraA06t23353Z' => 'bra', 'BraA06t27473Z' => 'bra', 'BraA06t27769Z' => 'bra', 'BraA07t28928Z' => 'bra', 'BraA08t32236Z' => 'bra', 'BraA08t32841Z' => 'bra', 'BraA08t34524Z' => 'bra', 'BraA09t38742Z' => 'bra', 'BraA09t39295Z' => 'bra', 'C02p47180' => 'bna', 'C02p50990' => 'bna', 'C03p19360' => 'bna', 'C03p74950' => 'bna', 'C03p91000' => 'bna', 'C04p63260' => 'bna', 'C05p27050' => 'bna', 'C06p08750' => 'bna', 'C06p11490' => 'bna', 'C07p02820' => 'bna', 'C07p17180' => 'bna', 'C07p29440' => 'bna', 'C07p63730' => 'bna', 'C09p39260' => 'bna', 'CAN.G1164.34' => 'can', 'CAN.G1164.39' => 'can', 'CAN.G1530.3' => 'can', 'CAN.G162.61' => 'can', 'CAN.G176.6' => 'can', 'CAN.G289.49' => 'can', 'CAN.G370.21' => 'can', 'CAN.G370.22' => 'can', 'CAN.G371.117' => 'can', 'CAN.G58.37' => 'can', 'CAN.G588.98' => 'can', 'CANSAT21G2266' => 'cansat', 'CANSAT25G2799' => 'cansat', 'CANSAT35G0862' => 'cansat', 'CANSAT35G1704' => 'cansat', 'CANSAT35G1760' => 'cansat', 'CANSAT56G3971' => 'cansat', 'CANSAT56G4116' => 'cansat', 'CANSAT80G1259' => 'cansat', 'CARHR027730' => 'chi', 'CARHR033880' => 'chi', 'CARHR043270' => 'chi', 'CARHR145330' => 'chi', 'CARHR145340' => 'chi', 'CARHR175570' => 'chi', 'CARHR181570' => 'chi', 'CARHR258470' => 'chi', 'CARHR260490' => 'chi', 'CARHR294220' => 'chi', 'Carub.0001s2668' => 'cru', 'Carub.0001s3257' => 'cru', 'Carub.0001s4220' => 'cru', 'Carub.0005s0179' => 'cru', 'Carub.0006s2807' => 'cru', 'Carub.0007s0039' => 'cru', 'Carub.0008s0169' => 'cru', 'Carub.0008s0636' => 'cru', 'Ca_00338_v3' => 'car', 'Ca_00542_v3' => 'car', 'Ca_01844_v3' => 'car', 'Ca_10611_v3' => 'car', 'Ca_13326_v3' => 'car', 'Ca_17944_v3' => 'car', 'Ca_18546_v3' => 'car', 'Ca_24219_v3' => 'car', 'Ca_29972_v3' => 'car', 'CBR_g3681' => 'cbr', 'CBR_g40021' => 'cbr', 'Cc01_g08140' => 'ccan', 'Cc02_g13410' => 'ccan', 'Cc02_g37480' => 'ccan', 'Cc05_g12030' => 'ccan', 'Cc09_g03370' => 'ccan', 'Cc09_g10300' => 'ccan', 'Cc10_g03530' => 'ccan', 'Cc10_g11380' => 'ccan', 'CDE01G0176' => 'cde', 'CDE02G0675' => 'cde', 'CDE02G0942' => 'cde', 'CDE02G1153' => 'cde', 'CDE02G4177' => 'cde', 'CDE04G2117' => 'cde', 'CDE04G2736' => 'cde', 'CDE08G1161' => 'cde', 'CDE09G1238' => 'cde', 'Cfa000467' => 'cfa', 'Cfa000947' => 'cfa', 'Cfa004969' => 'cfa', 'Cfa005284' => 'cfa', 'Cfa008993' => 'cfa', 'Cfa018187' => 'cfa', 'Cfa018454' => 'cfa', 'Cfa020585' => 'cfa', 'Ciclev10000424m.g' => 'ccl', 'Ciclev10003605m.g' => 'ccl', 'Ciclev10007828m.g' => 'ccl', 'Ciclev10014620m.g' => 'ccl', 'Ciclev10015169m.g' => 'ccl', 'Ciclev10018291m.g' => 'ccl', 'Ciclev10028256m.g' => 'ccl', 'Ciclev10033822m.g' => 'ccl', 'CiPaw.05G060300' => 'cil', 'CiPaw.05G085000' => 'cil', 'CiPaw.06G083700' => 'cil', 'CiPaw.06G120300' => 'cil', 'CiPaw.09G060500' => 'cil', 'CiPaw.09G123800' => 'cil', 'CiPaw.11G169700' => 'cil', 'CiPaw.12G118300' => 'cil', 'CiPaw.15G071000' => 'cil', 'CiPaw.15G081900' => 'cil', 'ClCG01G024610' => 'cla', 'ClCG03G006070' => 'cla', 'ClCG05G019250' => 'cla', 'ClCG09G009500' => 'cla', 'ClCG11G008200' => 'cla', 'ClCG11G018080' => 'cla', 'COL.COLO4_17373' => 'col', 'COL.COLO4_22994' => 'col', 'COL.COLO4_26389' => 'col', 'COL.COLO4_27170' => 'col', 'COL.COLO4_31074' => 'col', 'COL.COLO4_31465' => 'col', 'COL.COLO4_36438' => 'col', 'COL.COLO4_36439' => 'col', 'Cpa.g.c38781' => 'cpa', 'Cpa.g.sc128.12' => 'cpa', 'Cpa.g.sc166.7' => 'cpa', 'Cpa.g.sc166.8' => 'cpa', 'Cpa.g.sc20.111' => 'cpa', 'Cpa.g.sc27.31' => 'cpa', 'Cpa.g.sc64.36' => 'cpa', 'Cpa.g.sc64.37' => 'cpa', 'Cpa.g.sc66.49' => 'cpa', 'Cpa.g.sc80.64' => 'cpa', 'CsaV3_1G012320' => 'csa', 'CsaV3_2G008480' => 'csa', 'CsaV3_2G033450' => 'csa', 'CsaV3_3G044830' => 'csa', 'CsaV3_4G033710' => 'csa', 'CsaV3_6G051730' => 'csa', 'CsaV3_7G025350' => 'csa', 'CSS0001067' => 'camsi', 'CSS0005996' => 'camsi', 'CSS0006590' => 'camsi', 'CSS0009673' => 'camsi', 'CSS0010201' => 'camsi', 'CSS0010549' => 'camsi', 'CSS0011364' => 'camsi', 'CSS0014473' => 'camsi', 'CSS0014961' => 'camsi', 'CSS0020191' => 'camsi', 'CSS0021165' => 'camsi', 'CSS0022306' => 'camsi', 'CSS0030591' => 'camsi', 'CSS0030696' => 'camsi', 'CSS0032653' => 'camsi', 'CSS0037487' => 'camsi', 'CSS0041102' => 'camsi', 'CSS0041261' => 'camsi', 'CSS0046246' => 'camsi', 'CSS0049256' => 'camsi', 'DCAR_004075' => 'dca', 'DCAR_011538' => 'dca', 'DCAR_019553' => 'dca', 'DCAR_020952' => 'dca', 'DCAR_021739' => 'dca', 'DCAR_027407' => 'dca', 'DCAR_027913' => 'dca', 'DCAR_028066' => 'dca', 'Dinv05899' => 'din', 'Dinv07563' => 'din', 'Dinv08010' => 'din', 'Dinv14125' => 'din', 'Dinv20172' => 'din', 'Dinv30743' => 'din', 'Dinv31229' => 'din', 'Dinv34162' => 'din', 'Dinv36028' => 'din', 'Dinv39368' => 'din', 'Dinv40565' => 'din', 'Dinv41706' => 'din', 'Duzib052G0089' => 'dzi', 'Duzib116G0641' => 'dzi', 'Duzib132G0069' => 'dzi', 'Duzib132G1219' => 'dzi', 'Duzib147G0278' => 'dzi', 'Duzib160G0480' => 'dzi', 'Duzib170G0661' => 'dzi', 'Duzib177G0591' => 'dzi', 'Duzib187G1353' => 'dzi', 'Duzib192G0858' => 'dzi', 'Duzib192G0883' => 'dzi', 'Duzib213G0506' => 'dzi', 'Duzib235G0289' => 'dzi', 'Duzib251G0422' => 'dzi', 'ECA232G3898' => 'eca', 'ECA233G5950' => 'eca', 'ECA234G1699' => 'eca', 'ECA234G2421' => 'eca', 'ECA236G0426' => 'eca', 'ECA236G4331' => 'eca', 'ECA248G2573' => 'eca', 'EL10Ac1g00077' => 'bvu', 'EL10Ac1g01746' => 'bvu', 'EL10Ac2g03464' => 'bvu', 'EL10Ac4g08176' => 'bvu', 'EL10Ac7g17521' => 'bvu', 'EL10Ac8g20386' => 'bvu', 'EL10Ac9g21343' => 'bvu', 'EL10Ac9g22688' => 'bvu', 'Eucgr.B03434' => 'egr', 'Eucgr.D00618' => 'egr', 'Eucgr.E02395' => 'egr', 'Eucgr.F01129' => 'egr', 'Eucgr.F02622' => 'egr', 'Eucgr.F04207' => 'egr', 'FAN01G0570' => 'fan', 'FAN03G3351' => 'fan', 'FAN06G3702' => 'fan', 'FAN07G2149' => 'fan', 'FAN10G3758' => 'fan', 'FAN11G1170' => 'fan', 'FAN11G2050' => 'fan', 'FAN11G2724' => 'fan', 'FAN12G1700' => 'fan', 'FAN12G2028' => 'fan', 'FAN15G1160' => 'fan', 'FAN15G3063' => 'fan', 'FAN16G2540' => 'fan', 'FAN16G3077' => 'fan', 'FAN16G3624' => 'fan', 'FAN17G0221' => 'fan', 'FAN20G2492' => 'fan', 'FAN20G2905' => 'fan', 'FAN21G0548' => 'fan', 'FAN21G1300' => 'fan', 'FAN22G0077' => 'fan', 'FAN22G1315' => 'fan', 'FAN24G1280' => 'fan', 'FAN24G1445' => 'fan', 'FAN24G3527' => 'fan', 'FAN25G0464' => 'fan', 'FAN25G2885' => 'fan', 'FAN25G3270' => 'fan', 'FAN27G1101' => 'fan', 'FAN27G2846' => 'fan', 'FAN27G3524' => 'fan', 'FvH4_2g11770' => 'fve', 'FvH4_2g15630' => 'fve', 'FvH4_3g05570' => 'fve', 'FvH4_3g09110' => 'fve', 'FvH4_3g19940' => 'fve', 'FvH4_4g04821' => 'fve', 'FvH4_4g31480' => 'fve', 'FvH4_7g01740' => 'fve', 'Glyma.05G130400' => 'gma', 'Glyma.05G156400' => 'gma', 'Glyma.07G197000' => 'gma', 'Glyma.08G085151' => 'gma', 'Glyma.08G114500' => 'gma', 'Glyma.08G300400' => 'gma', 'Glyma.10G215800' => 'gma', 'Glyma.12G224400' => 'gma', 'Glyma.13G179300' => 'gma', 'Glyma.13G218151' => 'gma', 'Glyma.13G238800' => 'gma', 'Glyma.13G276900' => 'gma', 'Glyma.14G078200' => 'gma', 'Glyma.15G074500' => 'gma', 'Glyma.15G094100' => 'gma', 'Glyma.17G247200' => 'gma', 'Glyma.18G120100' => 'gma', 'Glyma.20G176000' => 'gma', 'Gohir.A01G063600' => 'ghi', 'Gohir.A01G170301' => 'ghi', 'Gohir.A02G060500' => 'ghi', 'Gohir.A05G133850' => 'ghi', 'Gohir.A05G161400' => 'ghi', 'Gohir.A06G012900' => 'ghi', 'Gohir.A06G035901' => 'ghi', 'Gohir.A06G127100' => 'ghi', 'Gohir.A06G210500' => 'ghi', 'Gohir.A08G008650' => 'ghi', 'Gohir.A09G072700' => 'ghi', 'Gohir.A09G088301' => 'ghi', 'Gohir.A10G040600' => 'ghi', 'Gohir.A12G036300' => 'ghi', 'Gohir.A12G143350' => 'ghi', 'Gohir.A12G165500' => 'ghi', 'Gohir.A13G145700' => 'ghi', 'Gohir.D01G050000' => 'ghi', 'Gohir.D01G051366' => 'ghi', 'Gohir.D01G161350' => 'ghi', 'Gohir.D02G065900' => 'ghi', 'Gohir.D05G164200' => 'ghi', 'Gohir.D05G355500' => 'ghi', 'Gohir.D06G010400' => 'ghi', 'Gohir.D06G111250' => 'ghi', 'Gohir.D06G132000' => 'ghi', 'Gohir.D06G210500' => 'ghi', 'Gohir.D07G165675' => 'ghi', 'Gohir.D08G062240' => 'ghi', 'Gohir.D08G086101' => 'ghi', 'Gohir.D08G138060' => 'ghi', 'Gohir.D09G072300' => 'ghi', 'Gohir.D10G041400' => 'ghi', 'Gohir.D11G191020' => 'ghi', 'Gohir.D11G212066' => 'ghi', 'Gohir.D12G036300' => 'ghi', 'Gohir.D12G168600' => 'ghi', 'Gohir.D13G150600' => 'ghi', 'Gorai.001G057300' => 'gra', 'Gorai.002G069900' => 'gra', 'Gorai.002G200000' => 'gra', 'Gorai.003G067600' => 'gra', 'Gorai.005G074800' => 'gra', 'Gorai.006G087300' => 'gra', 'Gorai.008G037500' => 'gra', 'Gorai.008G181400' => 'gra', 'Gorai.009G169400' => 'gra', 'Gorai.009G387900' => 'gra', 'Gorai.010G013300' => 'gra', 'Gorai.010G153800' => 'gra', 'Gorai.010G255800' => 'gra', 'Gorai.011G043700' => 'gra', 'Gorai.011G198900' => 'gra', 'Gorai.013G168400' => 'gra', 'GSVIVG01005212001' => 'vvi', 'GSVIVG01006163001' => 'vvi', 'GSVIVG01009625001' => 'vvi', 'GSVIVG01014338001' => 'vvi', 'GSVIVG01020005001' => 'vvi', 'GSVIVG01021450001' => 'vvi', 'GSVIVG01023975001' => 'vvi', 'GSVIVG01034490001' => 'vvi', 'HanXRQChr04g0112071' => 'han', 'HanXRQChr05g0131151' => 'han', 'HanXRQChr09g0262371' => 'han', 'HanXRQChr09g0268401' => 'han', 'HanXRQChr10g0279241' => 'han', 'HanXRQChr10g0297961' => 'han', 'HanXRQChr11g0326231' => 'han', 'HanXRQChr11g0328471' => 'han', 'HanXRQChr16g0507941' => 'han', 'HanXRQChr17g0560211' => 'han', 'Haze_02108' => 'cav', 'Haze_02428' => 'cav', 'Haze_05593' => 'cav', 'Haze_06448' => 'cav', 'Haze_09427' => 'cav', 'Haze_12022' => 'cav', 'Haze_17612' => 'cav', 'Haze_17928' => 'cav', 'Hma1.2p1_0032F.1_g019250' => 'hma', 'Hma1.2p1_0163F.1_g072690' => 'hma', 'Hma1.2p1_0265F.1_g106710' => 'hma', 'Hma1.2p1_0286F.1_g113970' => 'hma', 'Hma1.2p1_0363F.1_g136640' => 'hma', 'Hma1.2p1_0584F.1_g183470' => 'hma', 'Hma1.2p1_0885F.1_g232570' => 'hma', 'HPP92_006022' => 'vpl', 'HPP92_007320' => 'vpl', 'HPP92_011521' => 'vpl', 'HPP92_019387' => 'vpl', 'HPP92_024038' => 'vpl', 'Hund05891' => 'sun', 'Hund06450' => 'sun', 'Hund12053' => 'sun', 'Hund16800' => 'sun', 'Hund21222' => 'sun', 'Hund22896' => 'sun', 'Hund23746' => 'sun', 'Hund27083' => 'sun', 'Lalb_Chr02g0141831' => 'lal', 'Lalb_Chr02g0141841' => 'lal', 'Lalb_Chr05g0220411' => 'lal', 'Lalb_Chr06g0162081' => 'lal', 'Lalb_Chr09g0327651' => 'lal', 'Lalb_Chr13g0295051' => 'lal', 'Lalb_Chr15g0086801' => 'lal', 'Lalb_Chr16g0383781' => 'lal', 'Lalb_Chr16g0383791' => 'lal', 'Lalb_Chr18g0055441' => 'lal', 'Lalb_Chr18g0059611' => 'lal', 'Lalb_Chr20g0109661' => 'lal', 'Lalb_Chr20g0109831' => 'lal', 'Lalb_Chr20g0121871' => 'lal', 'Lalb_Chr22g0355361' => 'lal', 'Lalb_Chr25g0286371' => 'lal', 'Lj1A1187G43' => 'lonja', 'Lj1A1205T50' => 'lonja', 'Lj1A800G33' => 'lonja', 'Lj1C1187T7' => 'lonja', 'Lj1C843T11' => 'lonja', 'Lj1g0010940' => 'lja', 'Lj2A288T69' => 'lonja', 'Lj3g0024276' => 'lja', 'Lj4A47T76' => 'lonja', 'Lj4g0005805' => 'lja', 'Lj4g0006097' => 'lja', 'Lj4g0008528' => 'lja', 'Lj4g0024907' => 'lja', 'Lj5g0012472' => 'lja', 'Lj5g0018648' => 'lja', 'Lj6C789G1' => 'lonja', 'Lj6g0004000' => 'lja', 'Lj7A292G67' => 'lonja', 'Lj7A292T64' => 'lonja', 'Lj9A400T58' => 'lonja', 'Lsat_1_v5_gn_1_126181' => 'lsa', 'Lsat_1_v5_gn_4_123041' => 'lsa', 'Lsat_1_v5_gn_4_133620' => 'lsa', 'Lsat_1_v5_gn_4_53221' => 'lsa', 'Lsat_1_v5_gn_4_71961' => 'lsa', 'Lsat_1_v5_gn_7_105241' => 'lsa', 'Lsat_1_v5_gn_7_21361' => 'lsa', 'Lsat_1_v5_gn_7_28860' => 'lsa', 'Lsat_1_v5_gn_7_31260' => 'lsa', 'Lsat_1_v5_gn_8_52801' => 'lsa', 'Manes.02G191400' => 'mes', 'Manes.03G110100' => 'mes', 'Manes.04G071100' => 'mes', 'Manes.05G100500' => 'mes', 'Manes.05G164700' => 'mes', 'Manes.15G087000' => 'mes', 'Manes.15G121500' => 'mes', 'Manes.16G028300' => 'mes', 'Manes.17G046100' => 'mes', 'Manes.17G069800' => 'mes', 'Manes.18G100500' => 'mes', 'Mapoly0002s0109' => 'mpo', 'Mapoly0024s0007' => 'mpo', 'Mapoly0089s0032' => 'mpo', 'MBI04_g42241_MAGBIO' => 'mbi', 'MBI05_g11988_MAGBIO' => 'mbi', 'MBI05_g35452_MAGBIO' => 'mbi', 'MBI07_g30179_MAGBIO' => 'mbi', 'MBI07_g35859_MAGBIO' => 'mbi', 'MBI07_g35860_MAGBIO' => 'mbi', 'MBI07_g37166_MAGBIO' => 'mbi', 'MBI08_g18172_MAGBIO' => 'mbi', 'MBI09_g08441_MAGBIO' => 'mbi', 'MBI13_g01676_MAGBIO' => 'mbi', 'MBI14_g42955_MAGBIO' => 'mbi', 'MBI16_g13161_MAGBIO' => 'mbi', 'MBI17_g27204_MAGBIO' => 'mbi', 'MBI19_g21595_MAGBIO' => 'mbi', 'MD00G1148400' => 'mdo', 'MD02G1301200' => 'mdo', 'MD03G1227800' => 'mdo', 'MD05G1041100' => 'mdo', 'MD05G1124800' => 'mdo', 'MD05G1284000' => 'mdo', 'MD05G1338800' => 'mdo', 'MD05G1338900' => 'mdo', 'MD07G1022800' => 'mdo', 'MD10G1047500' => 'mdo', 'MD10G1127500' => 'mdo', 'MD10G1262300' => 'mdo', 'MD10G1293800' => 'mdo', 'MD16G1074300' => 'mdo', 'Medtr1g021670' => 'mtr', 'Medtr1g096320' => 'mtr', 'Medtr2g013690' => 'mtr', 'Medtr2g019450' => 'mtr', 'Medtr2g085170' => 'mtr', 'Medtr4g088785' => 'mtr', 'Medtr8g055930' => 'mtr', 'Medtr8g085850' => 'mtr', 'MELO3C002605.2' => 'cme', 'MELO3C003891.2' => 'cme', 'MELO3C004012.2' => 'cme', 'MELO3C007134.2' => 'cme', 'MELO3C008118.2' => 'cme', 'MELO3C016700.2' => 'cme', 'MELO3C024127.2' => 'cme', 'MELO3C033361.2' => 'cme', 'MELO3C033362.2' => 'cme', 'Migut.C00430' => 'egut', 'Migut.C01246' => 'egut', 'Migut.E00101' => 'egut', 'Migut.H01486' => 'egut', 'Migut.H01939' => 'egut', 'Migut.K00360' => 'egut', 'Migut.M00910' => 'egut', 'Migut.M01139' => 'egut', 'Migut.N02677' => 'egut', 'MSTRG.13252' => 'ama', 'MSTRG.14701' => 'ama', 'MSTRG.1521' => 'ama', 'MSTRG.15884' => 'ama', 'MSTRG.16242' => 'ama', 'MSTRG.22285' => 'ama', 'MSTRG.22444' => 'ama', 'MSTRG.2349' => 'ama', 'MSTRG.26308' => 'ama', 'MSTRG.28296' => 'ama', 'MSTRG.9895' => 'ama', 'Nitab4.5_0000110g0060' => 'nta', 'Nitab4.5_0000420g0130' => 'nta', 'Nitab4.5_0000422g0030' => 'nta', 'Nitab4.5_0000560g0180' => 'nta', 'Nitab4.5_0000703g0100' => 'nta', 'Nitab4.5_0000786g0200' => 'nta', 'Nitab4.5_0001336g0020' => 'nta', 'Nitab4.5_0001796g0030' => 'nta', 'Nitab4.5_0003348g0060' => 'nta', 'Nitab4.5_0003698g0040' => 'nta', 'Nitab4.5_0003942g0090' => 'nta', 'Nitab4.5_0004775g0070' => 'nta', 'Nitab4.5_0004864g0030' => 'nta', 'Nitab4.5_0005615g0020' => 'nta', 'Nitab4.5_0009288g0030' => 'nta', 'Nitab4.5_0009341g0010' => 'nta', 'Nitab4.5_0009535g0010' => 'nta', 'Nn1g03995' => 'nnu', 'Nn1g04100' => 'nnu', 'Nn1g06530' => 'nnu', 'Nn3g16404' => 'nnu', 'Nn3g17212' => 'nnu', 'Nn3g20776' => 'nnu', 'Nn3g21923' => 'nnu', 'Nn5g27737' => 'nnu', 'Nn5g29461' => 'nnu', 'Nn7g38355' => 'nnu', 'Nn8g39873' => 'nnu', 'Oeu000548.2' => 'oeu', 'Oeu004672.1' => 'oeu', 'Oeu015605.2' => 'oeu', 'Oeu016092.1' => 'oeu', 'Oeu017879.3' => 'oeu', 'Oeu024910.1' => 'oeu', 'Oeu028965.1' => 'oeu', 'Oeu031269.1' => 'oeu', 'Oeu031270.1' => 'oeu', 'Oeu032535.1' => 'oeu', 'Oeu034151.1' => 'oeu', 'Oeu034152.1' => 'oeu', 'Oeu034588.2' => 'oeu', 'Oeu050846.1' => 'oeu', 'Oeu050849.2' => 'oeu', 'Oeu051063.2' => 'oeu', 'Oeu052368.1' => 'oeu', 'Oeu052370.1' => 'oeu', 'Os01g0210400' => 'osa', 'Os01g0304300' => 'osa', 'Os01g0749100' => 'osa', 'Os02g0745800' => 'osa', 'Os03g0769050' => 'osa', 'Os05g0531500' => 'osa', 'Os06g0724300' => 'osa', 'Os11g0198100' => 'osa', 'Peaxi162Scf00069g01425' => 'pax', 'Peaxi162Scf00280g00811' => 'pax', 'Peaxi162Scf00310g00615' => 'pax', 'Peaxi162Scf00362g00542' => 'pax', 'Peaxi162Scf00461g00310' => 'pax', 'Peaxi162Scf00530g00118' => 'pax', 'Peaxi162Scf00541g00057' => 'pax', 'Peaxi162Scf00661g00017' => 'pax', 'Peaxi162Scf00926g00027' => 'pax', 'Peaxi162Scf01064g00263' => 'pax', 'Peaxi162Scf01211g00135' => 'pax', 'PGR004G2336' => 'pgr', 'PGR042G0327' => 'pgr', 'PGR042G1957' => 'pgr', 'PGR042G2003' => 'pgr', 'PGR042G3929' => 'pgr', 'PGR083G1137' => 'pgr', 'PGR083G1364' => 'pgr', 'PGSC0003DMG400003381' => 'stu', 'PGSC0003DMG400003417' => 'stu', 'PGSC0003DMG400008981' => 'stu', 'PGSC0003DMG400012417' => 'stu', 'PGSC0003DMG400012823' => 'stu', 'PGSC0003DMG400016885' => 'stu', 'PGSC0003DMG400022812' => 'stu', 'PGSC0003DMG400029726' => 'stu', 'PGSC0003DMG401009243' => 'stu', 'PGSC0003DMG401031505' => 'stu', 'PGSC0003DMG402031505' => 'stu', 'Phvul.001G017600' => 'pvu', 'Phvul.002G193500' => 'pvu', 'Phvul.002G228900' => 'pvu', 'Phvul.002G236800' => 'pvu', 'Phvul.003G049500' => 'pvu', 'Phvul.005G072000' => 'pvu', 'Phvul.006G164800' => 'pvu', 'Phvul.006G185100' => 'pvu', 'Phvul.007G090000' => 'pvu', 'Potri.001G399800' => 'ptr', 'Potri.002G149900' => 'ptr', 'Potri.004G044100' => 'ptr', 'Potri.004G177600' => 'ptr', 'Potri.009G138000' => 'ptr', 'Potri.010G094000' => 'ptr', 'Potri.011G053000' => 'ptr', 'Potri.011G119300' => 'ptr', 'Potri.013G113700' => 'ptr', 'Potri.018G107800' => 'ptr', 'Potri.019G084100' => 'ptr', 'Pp3c14_23720' => 'ppa', 'Pp3c16_6340' => 'ppa', 'Pp3c23_13420' => 'ppa', 'Pp3c24_2740' => 'ppa', 'Pp3c25_860' => 'ppa', 'Pp3c8_21750' => 'ppa', 'Prupe.1G273000' => 'ppe', 'Prupe.1G273700' => 'ppe', 'Prupe.1G274100' => 'ppe', 'Prupe.2G023300' => 'ppe', 'Prupe.4G048000' => 'ppe', 'Prupe.4G080400' => 'ppe', 'Prupe.4G181200' => 'ppe', 'Prupe.8G056900' => 'ppe', 'Prupe.8G168700' => 'ppe', 'Psat1g189080' => 'psa', 'Psat1g204760' => 'psa', 'Psat4g175560' => 'psa', 'Psat4g177720' => 'psa', 'Psat5g244240' => 'psa', 'Psat6g010720' => 'psa', 'Psat6g187200' => 'psa', 'Psat7g072040' => 'psa', 'PSO017G3501' => 'pso', 'PSO063G2148' => 'pso', 'PSO063G5608' => 'pso', 'PSO210G6392' => 'pso', 'PSO541G2319' => 'pso', 'PSO541G2836' => 'pso', 'PSO541G4012' => 'pso', 'PSO541G6253' => 'pso', 'PSO675G0580' => 'pso', 'PSO675G0856' => 'pso', 'PSO675G5635' => 'pso', 'PSO675G9157' => 'pso', 'PSO832G1660' => 'pso', 'PSO832G1969' => 'pso', 'QL02p007186' => 'qlo', 'QL02p033904' => 'qlo', 'QL03p064391' => 'qlo', 'QL05p040593' => 'qlo', 'QL05p058242' => 'qlo', 'QL08p021825' => 'qlo', 'QL11p004981' => 'qlo', 'RcHm_v2.0_Chr1g0318301' => 'rch', 'RcHm_v2.0_Chr4g0418501' => 'rch', 'RcHm_v2.0_Chr4g0439971' => 'rch', 'RcHm_v2.0_Chr5g0008541' => 'rch', 'RcHm_v2.0_Chr5g0014101' => 'rch', 'RcHm_v2.0_Chr5g0014131' => 'rch', 'RcHm_v2.0_Chr5g0033621' => 'rch', 'RcHm_v2.0_Chr6g0272041' => 'rch', 'RcHm_v2.0_Chr6g0278831' => 'rch', 'Rhsim02G0130400' => 'rsi', 'Rhsim02G0171100' => 'rsi', 'Rhsim05G0053000' => 'rsi', 'Rhsim05G0053100' => 'rsi', 'Rhsim06G0096500' => 'rsi', 'Rhsim06G0096600' => 'rsi', 'Rhsim06G0199100' => 'rsi', 'Rhsim12G0062300' => 'rsi', 'Rhsim12G0062800' => 'rsi', 'Sabra02G0118600' => 'sbr', 'Sabra04G0027300' => 'sbr', 'Sabra04G0119500' => 'sbr', 'Sabra08G0112500' => 'sbr', 'Sabra11G0036800' => 'sbr', 'Sabra11G0103800' => 'sbr', 'Sabra13G0096300' => 'sbr', 'Sabra16G0262300' => 'sbr', 'Sabra18G0091700' => 'sbr', 'Sabra19G0095400' => 'sbr', 'SalBow6G3080' => 'sbo', 'SalBow7G1157' => 'sbo', 'SalBow7G2123' => 'sbo', 'SalBow7G2285' => 'sbo', 'SalBow7G3537' => 'sbo', 'SalBow8G2947' => 'sbo', 'SalBow8G4463' => 'sbo', 'SalBow8G5466' => 'sbo', 'Sc01g0001750' => 'sci', 'Sc02g0006640' => 'sci', 'Sc02g0006670' => 'sci', 'Sc04g0008220' => 'sci', 'Sc05g0006190' => 'sci', 'Sc08g0002760' => 'sci', 'Sc17g0006170' => 'sci', 'Sc22g0002050' => 'sci', 'Sc23g0001190' => 'sci', 'Sc24g0000980' => 'sci', 'Sed0006245' => 'sed', 'Sed0007543' => 'sed', 'Sed0009411' => 'sed', 'Sed0010765' => 'sed', 'Sed0012944' => 'sed', 'Sed0014682' => 'sed', 'Sed0016174' => 'sed', 'Sed0016796' => 'sed', 'Sed0020317' => 'sed', 'Sed0021467' => 'sed', 'SEGI_01316' => 'sgi', 'SEGI_03374' => 'sgi', 'SEGI_16265' => 'sgi', 'SEGI_18569' => 'sgi', 'SEGI_20351' => 'sgi', 'SEGI_26395' => 'sgi', 'SEGI_29469' => 'sgi', 'SEGI_34771' => 'sgi', 'SEGI_36769' => 'sgi', 'SEGI_37139' => 'sgi', 'SGA_v2.0_scaffold100G29687' => 'sas', 'SGA_v2.0_scaffold118G32472' => 'sas', 'SGA_v2.0_scaffold14G07051' => 'sas', 'SGA_v2.0_scaffold183G39845' => 'sas', 'SGA_v2.0_scaffold1G00174' => 'sas', 'SGA_v2.0_scaffold22G09714' => 'sas', 'SGA_v2.0_scaffold333G48992' => 'sas', 'SGA_v2.0_scaffold46G17491' => 'sas', 'SGA_v2.0_scaffold49G18294' => 'sas', 'SGA_v2.0_scaffold63G21658' => 'sas', 'SHI01741' => 'shi', 'SHI05771' => 'shi', 'SHI18077' => 'shi', 'SHI20525' => 'shi', 'SHI20527' => 'shi', 'SHI20528' => 'shi', 'SMO172G0185' => 'smo', 'SMO198G0020' => 'smo', 'SMO351G0006' => 'smo', 'SMO356G0118' => 'smo', 'SMO358G0296' => 'smo', 'SMO367G0079' => 'smo', 'SMO367G1277' => 'smo', 'Solyc01g014220.3' => 'sly', 'Solyc01g111770.2' => 'sly', 'Solyc02g078180.3' => 'sly', 'Solyc03g006430.3' => 'sly', 'Solyc03g006456.1' => 'sly', 'Solyc03g079860.2' => 'sly', 'Solyc04g079770.3' => 'sly', 'Solyc05g007430.4' => 'sly', 'Solyc07g063150.3' => 'sly', 'Solyc08g016620.3' => 'sly', 'Solyc09g057590.3' => 'sly', 'Solyc09g057600.1' => 'sly', 'Solyc10g009050.3' => 'sly', 'Solyc11g017420.2' => 'sly', 'Sopen01g053810' => 'spe', 'Sopen02g023040' => 'spe', 'Sopen03g002440' => 'spe', 'Sopen04g033350' => 'spe', 'Sopen05g003310' => 'spe', 'Sopen07g004050' => 'spe', 'Sopen07g031340' => 'spe', 'Sopen08g006990' => 'spe', 'Sopen10g004830' => 'spe', 'Sopen11g009370' => 'spe', 'Sp1g24450' => 'spa', 'Sp1g29670' => 'spa', 'Sp1g39600' => 'spa', 'Sp2g11080' => 'spa', 'Sp2g13970' => 'spa', 'Sp4g16130' => 'spa', 'Sp6g13080' => 'spa', 'Sp7g37270' => 'spa', 'TAR371G0065' => 'tar', 'TAR376G0340' => 'tar', 'TAR376G0435' => 'tar', 'TAR381G0002' => 'tar', 'TAR381G1236' => 'tar', 'TAR624G0055' => 'tar', 'TAR624G0324' => 'tar', 'TAR624G0696' => 'tar', 'TAR624G0906' => 'tar', 'TAR625G0107' => 'tar', 'TAR626G0015' => 'tar', 'TAR626G1356' => 'tar', 'TAR627G0888' => 'tar', 'TAR628G0399' => 'tar', 'TAR628G1327' => 'tar', 'TAR629G2831' => 'tar', 'TAR629G2874' => 'tar', 'TAR633G1432' => 'tar', 'TAR633G2771' => 'tar', 'THA.LOC104803394' => 'tha', 'THA.LOC104805153' => 'tha', 'THA.LOC104806784' => 'tha', 'THA.LOC104810473' => 'tha', 'THA.LOC104813100' => 'tha', 'THA.LOC104814215' => 'tha', 'THA.LOC104815554' => 'tha', 'THA.LOC104820544' => 'tha', 'THA.LOC104824754' => 'tha', 'THA.LOC104827717' => 'tha', 'Thecc.02G031400' => 'tca', 'Thecc.02G055900' => 'tca', 'Thecc.02G350800' => 'tca', 'Thecc.06G150900' => 'tca', 'Thecc.06G186600' => 'tca', 'Thecc.07G089600' => 'tca', 'Thecc.08G020400' => 'tca', 'Thecc.08G182100' => 'tca', 'Thhalv10000873m.g' => 'esa', 'Thhalv10004185m.g' => 'esa', 'Thhalv10006981m.g' => 'esa', 'Thhalv10007204m.g' => 'esa', 'Thhalv10011374m.g' => 'esa', 'Thhalv10013482m.g' => 'esa', 'Thhalv10017801m.g' => 'esa', 'Thhalv10024983m.g' => 'esa', 'TPR.G12072' => 'tpr', 'TPR.G15769' => 'tpr', 'TPR.G16504' => 'tpr', 'TPR.G16506' => 'tpr', 'TPR.G24345' => 'tpr', 'TPR.G26666' => 'tpr', 'TPR.G27320' => 'tpr', 'TPR.G31819' => 'tpr', 'TPR.G38879' => 'tpr', 'TPR.G39015' => 'tpr', 'TPR.G8819' => 'tpr', 'TWI09G0924' => 'twi', 'TWI12G0811' => 'twi', 'TWI12G1294' => 'twi', 'TWI31G0150' => 'twi', 'TWI36G1262' => 'twi', 'TWI38G1287' => 'twi', 'TWI38G1633' => 'twi', 'TWI38G1982' => 'twi', 'TWI39G0116' => 'twi', 'TWI60G1011' => 'twi', 'TWI63G0171' => 'twi', 'TWI73G0839' => 'twi', 'TWI79G1511' => 'twi', 'unitig_0.g915' => 'ugi', 'unitig_0.g916' => 'ugi', 'unitig_21.g20219' => 'ugi', 'unitig_21.g20416' => 'ugi', 'unitig_578.g16132' => 'ugi', 'unitig_578.g16718' => 'ugi', 'unitig_62.g23481' => 'ugi', 'unitig_744.g24535' => 'ugi', 'unitig_749.g13525' => 'ugi', 'vmacro01248' => 'vma', 'vmacro02290' => 'vma', 'vmacro10946' => 'vma', 'vmacro11865' => 'vma', 'vmacro12493' => 'vma', 'vmacro17322' => 'vma', 'vmacro21599' => 'vma', 'vmacro23041' => 'vma', 'VMungo0251G0004' => 'vmu', 'VMungo0251G2639' => 'vmu', 'VMungo0251G2967' => 'vmu', 'VMungo0540G0864' => 'vmu', 'VMungo0540G1569' => 'vmu', 'VMungo0647G0317' => 'vmu', 'VMungo0720G1373' => 'vmu', 'VMungo0720G1508' => 'vmu', 'VMungo1080G0485' => 'vmu', 'VMungo1215G3177' => 'vmu', 'Zm00001eb112600' => 'zma', 'Zm00001eb120220' => 'zma', 'Zm00001eb153240' => 'zma', 'Zm00001eb168880' => 'zma', 'Zm00001eb213920' => 'zma', 'Zm00001eb228280' => 'zma', 'Zm00001eb254580' => 'zma', 'Zm00001eb272180' => 'zma', 'Zm00001eb293190' => 'zma', 'Zm00001eb322930' => 'zma', 'Zm00001eb353360' => 'zma', 'Zm00001eb353390' => 'zma', 'Zm00001eb353430' => 'zma', 'Zm00001eb353440' => 'zma', 'Zm00001eb353780' => 'zma' ) $gf_id = 'HOM05D000499' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000499' ) $data_identifier = 'HOM05D000499' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 29, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 12, 'amhyb' => (int) 8, 'aly' => (int) 12, 'aox' => (int) 9, 'arhy' => (int) 26, 'ath' => (int) 8, 'atr' => (int) 7, 'acertr' => (int) 10, 'cqu' => (int) 15, 'bca' => (int) 29, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 11, 'cansat' => (int) 8, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 9, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 8, 'cpa' => (int) 10, 'csa' => (int) 7, 'camsi' => (int) 20, 'dca' => (int) 8, 'din' => (int) 12, 'dzi' => (int) 14, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 6, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 38, 'gra' => (int) 16, 'vvi' => (int) 8, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 5, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 11, 'lja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 11, 'mpo' => (int) 3, 'mbi' => (int) 14, 'mdo' => (int) 14, 'mtr' => (int) 8, 'cme' => (int) 9, 'egut' => (int) 9, 'ama' => (int) 11, 'nta' => (int) 17, 'nnu' => (int) 11, 'oeu' => (int) 18, 'osa' => (int) 8, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 6, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 9, 'rsi' => (int) 9, 'sbr' => (int) 10, 'sbo' => (int) 8, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 10, 'sas' => (int) 10, 'shi' => (int) 6, 'smo' => (int) 7, 'sly' => (int) 14, 'spe' => (int) 10, 'spa' => (int) 8, 'tar' => (int) 19, 'tha' => (int) 10, 'tca' => (int) 8, 'esa' => (int) 8, 'tpr' => (int) 11, 'twi' => (int) 13, 'ugi' => (int) 9, 'vma' => (int) 8, 'vmu' => (int) 10, 'zma' => (int) 15 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb353780' $species_info = array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ) $local_species = 'spe' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000499', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1066', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p29780' => 'bna', 'A02p33180' => 'bna', 'A03p16470' => 'bna', 'A03p66010' => 'bna', 'A04p25970' => 'bna', 'A06p01270' => 'bna', 'A06p46080' => 'bna', 'A07p11400' => 'bna', 'A08p01840' => 'bna', 'A08p08230' => 'bna', 'A08p25740' => 'bna', 'A09p32070' => 'bna', 'A09p37830' => 'bna', 'A09p42840' => 'bna', 'A09p42850' => 'bna', 'Aa31LG10G2060' => 'aar', 'Aa31LG2G7410' => 'aar', 'Aa31LG6G10200' => 'aar', 'Aa31LG6G16680' => 'aar', 'Aa31LG6G8470' => 'aar', 'Aa31LG9G12730' => 'aar', 'Aa31LG9G13680' => 'aar', 'Aa31LG9G14920' => 'aar', 'Aa31LG9G6650' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4977' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5467' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3254' => 'aag', 'Actinidia02578' => 'ach', 'Actinidia07693' => 'ach', 'Actinidia08413' => 'ach', 'Actinidia08414' => 'ach', 'Actinidia15289' => 'ach', 'Actinidia19871' => 'ach', 'Actinidia21475' => 'ach', 'Actinidia22576' => 'ach', 'Actinidia28327' => 'ach', 'Actinidia32491' => 'ach', 'Actinidia39463' => 'ach', 'Actinidia39571' => 'ach', 'Ah.01g013750' => 'amhyb', 'Ah.01g023210' => 'amhyb', 'Ah.04g164850' => 'amhyb', 'Ah.05g178060' => 'amhyb', 'Ah.07g204270' => 'amhyb', 'Ah.07g208480' => 'amhyb', 'Ah.09g237410' => 'amhyb', 'Ah.14g089460' => 'amhyb', 'AL1G41790' => 'aly', 'AL1G49050' => 'aly', 'AL1G53810' => 'aly', 'AL1G61400' => 'aly', 'AL4G18580' => 'aly', 'AL5G12510' => 'aly', 'AL5G12540' => 'aly', 'AL6G43230' => 'aly', 'AL7G10370' => 'aly', 'AL7G19250' => 'aly', 'AL8G12240' => 'aly', 'AL8G18540' => 'aly', 'Aqoxy1G02409' => 'aox', 'Aqoxy2G03993' => 'aox', 'Aqoxy3G03357' => 'aox', 'Aqoxy4G00785' => 'aox', 'Aqoxy5G02598' => 'aox', 'Aqoxy6G00132' => 'aox', 'Aqoxy7G01776' => 'aox', 'Aqoxy7G02316' => 'aox', 'Aqoxy7G03973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.12AFKW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B8730' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27IQR1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3F75VG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3RE0GA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41TCQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.527VTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FIR39' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5W8UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DA38EV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ63HS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H1I32C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HC27T5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4M8AP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7N3CZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9UVDZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LS1NQA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT1D4B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SKC4TM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCFV76' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF9Q1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQWD9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1ZM88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WE07RT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YCK7VH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJE6Q6' => 'arhy', 'AT1G28240' => 'ath', 'AT1G34550' => 'ath', 'AT1G53040' => 'ath', 'AT2G02910' => 'ath', 'AT4G09630' => 'ath', 'AT4G38500' => 'ath', 'AT5G42660' => 'ath', 'AT5G46220' => 'ath', 'ATR0152G026' => 'atr', 'ATR0564G343' => 'atr', 'ATR0706G151' => 'atr', 'ATR0733G207' => 'atr', 'ATR0751G234' => 'atr', 'ATR0807G048' => 'atr', 'ATR1091G084' => 'atr', 'Atru.chr10.1229' => 'acertr', 'Atru.chr10.1230' => 'acertr', 'Atru.chr10.1874' => 'acertr', 'Atru.chr11.1808' => 'acertr', 'Atru.chr13.1795' => 'acertr', 'Atru.chr13.570' => 'acertr', 'Atru.chr2.2608' => 'acertr', 'Atru.chr2.2609' => 'acertr', 'Atru.chr5.3428' => 'acertr', 'Atru.chr8.1171' => 'acertr', 'AUR62004651' => 'cqu', 'AUR62008675' => 'cqu', 'AUR62010014' => 'cqu', 'AUR62013004' => 'cqu', 'AUR62014825' => 'cqu', 'AUR62015015' => 'cqu', 'AUR62015151' => 'cqu', 'AUR62017020' => 'cqu', 'AUR62019422' => 'cqu', 'AUR62023570' => 'cqu', 'AUR62025571' => 'cqu', 'AUR62029098' => 'cqu', 'AUR62033863' => 'cqu', 'AUR62034296' => 'cqu', 'AUR62040075' => 'cqu', 'BcaB02g07334' => 'bca', 'BcaB02g10575' => 'bca', 'BcaB03g12119' => 'bca', 'BcaB03g12120' => 'bca', 'BcaB03g13945' => 'bca', 'BcaB04g17123' => 'bca', 'BcaB04g17867' => 'bca', 'BcaB04g19839' => 'bca', 'BcaB07g30317' => 'bca', 'BcaB07g32432' => 'bca', 'BcaB07g33362' => 'bca', 'BcaB08g36611' => 'bca', 'BcaC01g00028' => 'bca', 'BcaC01g01356' => 'bca', 'BcaC01g02034' => 'bca', 'BcaC01g06051' => 'bca', 'BcaC03g16839' => 'bca', 'BcaC03g17176' => 'bca', 'BcaC05g26829' => 'bca', 'BcaC06g31490' => 'bca', 'BcaC06g35344' => 'bca', 'BcaC06g36570' => 'bca', 'BcaC07g37537' => 'bca', 'BcaC08g43491' => 'bca', 'BcaC08g43773' => 'bca', 'BcaNung00234' => 'bca', 'BcaNung01982' => 'bca', 'BcaNung03707' => 'bca', 'BcaNung06454' => 'bca', 'BolC2t10762H' => 'bol', 'BolC2t11191H' => 'bol', 'BolC3t14322H' => 'bol', 'BolC3t19747H' => 'bol', 'BolC3t21425H' => 'bol', 'BolC4t27800H' => 'bol', 'BolC5t31423H' => 'bol', 'BolC6t35951H' => 'bol', 'BolC6t36282H' => 'bol', 'BolC7t40678H' => 'bol', 'BolC7t40679H' => 'bol', 'BolC7t42222H' => 'bol', 'BolC7t43492H' => 'bol', 'BolC7t46785H' => 'bol', 'BolC8t47853H' => 'bol', 'BolC9t56805H' => 'bol', 'BraA02t08000Z' => 'bra', 'BraA02t08341Z' => 'bra', 'BraA03t10936Z' => 'bra', 'BraA03t15657Z' => 'bra', 'BraA04t18100Z' => 'bra', 'BraA05t20523Z' => 'bra', 'BraA06t23353Z' => 'bra', 'BraA06t27473Z' => 'bra', 'BraA06t27769Z' => 'bra', 'BraA07t28928Z' => 'bra', 'BraA08t32236Z' => 'bra', 'BraA08t32841Z' => 'bra', 'BraA08t34524Z' => 'bra', 'BraA09t38742Z' => 'bra', 'BraA09t39295Z' => 'bra', 'C02p47180' => 'bna', 'C02p50990' => 'bna', 'C03p19360' => 'bna', 'C03p74950' => 'bna', 'C03p91000' => 'bna', 'C04p63260' => 'bna', 'C05p27050' => 'bna', 'C06p08750' => 'bna', 'C06p11490' => 'bna', 'C07p02820' => 'bna', 'C07p17180' => 'bna', 'C07p29440' => 'bna', 'C07p63730' => 'bna', 'C09p39260' => 'bna', 'CAN.G1164.34' => 'can', 'CAN.G1164.39' => 'can', 'CAN.G1530.3' => 'can', 'CAN.G162.61' => 'can', 'CAN.G176.6' => 'can', 'CAN.G289.49' => 'can', 'CAN.G370.21' => 'can', 'CAN.G370.22' => 'can', 'CAN.G371.117' => 'can', 'CAN.G58.37' => 'can', 'CAN.G588.98' => 'can', 'CANSAT21G2266' => 'cansat', 'CANSAT25G2799' => 'cansat', 'CANSAT35G0862' => 'cansat', 'CANSAT35G1704' => 'cansat', 'CANSAT35G1760' => 'cansat', 'CANSAT56G3971' => 'cansat', 'CANSAT56G4116' => 'cansat', 'CANSAT80G1259' => 'cansat', 'CARHR027730' => 'chi', 'CARHR033880' => 'chi', 'CARHR043270' => 'chi', 'CARHR145330' => 'chi', 'CARHR145340' => 'chi', 'CARHR175570' => 'chi', 'CARHR181570' => 'chi', 'CARHR258470' => 'chi', 'CARHR260490' => 'chi', 'CARHR294220' => 'chi', 'Carub.0001s2668' => 'cru', 'Carub.0001s3257' => 'cru', 'Carub.0001s4220' => 'cru', 'Carub.0005s0179' => 'cru', 'Carub.0006s2807' => 'cru', 'Carub.0007s0039' => 'cru', 'Carub.0008s0169' => 'cru', 'Carub.0008s0636' => 'cru', 'Ca_00338_v3' => 'car', 'Ca_00542_v3' => 'car', 'Ca_01844_v3' => 'car', 'Ca_10611_v3' => 'car', 'Ca_13326_v3' => 'car', 'Ca_17944_v3' => 'car', 'Ca_18546_v3' => 'car', 'Ca_24219_v3' => 'car', 'Ca_29972_v3' => 'car', 'CBR_g3681' => 'cbr', 'CBR_g40021' => 'cbr', 'Cc01_g08140' => 'ccan', 'Cc02_g13410' => 'ccan', 'Cc02_g37480' => 'ccan', 'Cc05_g12030' => 'ccan', 'Cc09_g03370' => 'ccan', 'Cc09_g10300' => 'ccan', 'Cc10_g03530' => 'ccan', 'Cc10_g11380' => 'ccan', 'CDE01G0176' => 'cde', 'CDE02G0675' => 'cde', 'CDE02G0942' => 'cde', 'CDE02G1153' => 'cde', 'CDE02G4177' => 'cde', 'CDE04G2117' => 'cde', 'CDE04G2736' => 'cde', 'CDE08G1161' => 'cde', 'CDE09G1238' => 'cde', 'Cfa000467' => 'cfa', 'Cfa000947' => 'cfa', 'Cfa004969' => 'cfa', 'Cfa005284' => 'cfa', 'Cfa008993' => 'cfa', 'Cfa018187' => 'cfa', 'Cfa018454' => 'cfa', 'Cfa020585' => 'cfa', 'Ciclev10000424m.g' => 'ccl', 'Ciclev10003605m.g' => 'ccl', 'Ciclev10007828m.g' => 'ccl', 'Ciclev10014620m.g' => 'ccl', 'Ciclev10015169m.g' => 'ccl', 'Ciclev10018291m.g' => 'ccl', 'Ciclev10028256m.g' => 'ccl', 'Ciclev10033822m.g' => 'ccl', 'CiPaw.05G060300' => 'cil', 'CiPaw.05G085000' => 'cil', 'CiPaw.06G083700' => 'cil', 'CiPaw.06G120300' => 'cil', 'CiPaw.09G060500' => 'cil', 'CiPaw.09G123800' => 'cil', 'CiPaw.11G169700' => 'cil', 'CiPaw.12G118300' => 'cil', 'CiPaw.15G071000' => 'cil', 'CiPaw.15G081900' => 'cil', 'ClCG01G024610' => 'cla', 'ClCG03G006070' => 'cla', 'ClCG05G019250' => 'cla', 'ClCG09G009500' => 'cla', 'ClCG11G008200' => 'cla', 'ClCG11G018080' => 'cla', 'COL.COLO4_17373' => 'col', 'COL.COLO4_22994' => 'col', 'COL.COLO4_26389' => 'col', 'COL.COLO4_27170' => 'col', 'COL.COLO4_31074' => 'col', 'COL.COLO4_31465' => 'col', 'COL.COLO4_36438' => 'col', 'COL.COLO4_36439' => 'col', 'Cpa.g.c38781' => 'cpa', 'Cpa.g.sc128.12' => 'cpa', 'Cpa.g.sc166.7' => 'cpa', 'Cpa.g.sc166.8' => 'cpa', 'Cpa.g.sc20.111' => 'cpa', 'Cpa.g.sc27.31' => 'cpa', 'Cpa.g.sc64.36' => 'cpa', 'Cpa.g.sc64.37' => 'cpa', 'Cpa.g.sc66.49' => 'cpa', 'Cpa.g.sc80.64' => 'cpa', 'CsaV3_1G012320' => 'csa', 'CsaV3_2G008480' => 'csa', 'CsaV3_2G033450' => 'csa', 'CsaV3_3G044830' => 'csa', 'CsaV3_4G033710' => 'csa', 'CsaV3_6G051730' => 'csa', 'CsaV3_7G025350' => 'csa', 'CSS0001067' => 'camsi', 'CSS0005996' => 'camsi', 'CSS0006590' => 'camsi', 'CSS0009673' => 'camsi', 'CSS0010201' => 'camsi', 'CSS0010549' => 'camsi', 'CSS0011364' => 'camsi', 'CSS0014473' => 'camsi', 'CSS0014961' => 'camsi', 'CSS0020191' => 'camsi', 'CSS0021165' => 'camsi', 'CSS0022306' => 'camsi', 'CSS0030591' => 'camsi', 'CSS0030696' => 'camsi', 'CSS0032653' => 'camsi', 'CSS0037487' => 'camsi', 'CSS0041102' => 'camsi', 'CSS0041261' => 'camsi', 'CSS0046246' => 'camsi', 'CSS0049256' => 'camsi', 'DCAR_004075' => 'dca', 'DCAR_011538' => 'dca', 'DCAR_019553' => 'dca', 'DCAR_020952' => 'dca', 'DCAR_021739' => 'dca', 'DCAR_027407' => 'dca', 'DCAR_027913' => 'dca', 'DCAR_028066' => 'dca', 'Dinv05899' => 'din', 'Dinv07563' => 'din', 'Dinv08010' => 'din', 'Dinv14125' => 'din', 'Dinv20172' => 'din', 'Dinv30743' => 'din', 'Dinv31229' => 'din', 'Dinv34162' => 'din', 'Dinv36028' => 'din', 'Dinv39368' => 'din', 'Dinv40565' => 'din', 'Dinv41706' => 'din', 'Duzib052G0089' => 'dzi', 'Duzib116G0641' => 'dzi', 'Duzib132G0069' => 'dzi', 'Duzib132G1219' => 'dzi', 'Duzib147G0278' => 'dzi', 'Duzib160G0480' => 'dzi', 'Duzib170G0661' => 'dzi', 'Duzib177G0591' => 'dzi', 'Duzib187G1353' => 'dzi', 'Duzib192G0858' => 'dzi', 'Duzib192G0883' => 'dzi', 'Duzib213G0506' => 'dzi', 'Duzib235G0289' => 'dzi', 'Duzib251G0422' => 'dzi', 'ECA232G3898' => 'eca', 'ECA233G5950' => 'eca', 'ECA234G1699' => 'eca', 'ECA234G2421' => 'eca', 'ECA236G0426' => 'eca', 'ECA236G4331' => 'eca', 'ECA248G2573' => 'eca', 'EL10Ac1g00077' => 'bvu', 'EL10Ac1g01746' => 'bvu', 'EL10Ac2g03464' => 'bvu', 'EL10Ac4g08176' => 'bvu', 'EL10Ac7g17521' => 'bvu', 'EL10Ac8g20386' => 'bvu', 'EL10Ac9g21343' => 'bvu', 'EL10Ac9g22688' => 'bvu', 'Eucgr.B03434' => 'egr', 'Eucgr.D00618' => 'egr', 'Eucgr.E02395' => 'egr', 'Eucgr.F01129' => 'egr', 'Eucgr.F02622' => 'egr', 'Eucgr.F04207' => 'egr', 'FAN01G0570' => 'fan', 'FAN03G3351' => 'fan', 'FAN06G3702' => 'fan', 'FAN07G2149' => 'fan', 'FAN10G3758' => 'fan', 'FAN11G1170' => 'fan', 'FAN11G2050' => 'fan', 'FAN11G2724' => 'fan', 'FAN12G1700' => 'fan', 'FAN12G2028' => 'fan', 'FAN15G1160' => 'fan', 'FAN15G3063' => 'fan', 'FAN16G2540' => 'fan', 'FAN16G3077' => 'fan', 'FAN16G3624' => 'fan', 'FAN17G0221' => 'fan', 'FAN20G2492' => 'fan', 'FAN20G2905' => 'fan', 'FAN21G0548' => 'fan', 'FAN21G1300' => 'fan', 'FAN22G0077' => 'fan', 'FAN22G1315' => 'fan', 'FAN24G1280' => 'fan', 'FAN24G1445' => 'fan', 'FAN24G3527' => 'fan', 'FAN25G0464' => 'fan', 'FAN25G2885' => 'fan', 'FAN25G3270' => 'fan', 'FAN27G1101' => 'fan', 'FAN27G2846' => 'fan', 'FAN27G3524' => 'fan', 'FvH4_2g11770' => 'fve', 'FvH4_2g15630' => 'fve', 'FvH4_3g05570' => 'fve', 'FvH4_3g09110' => 'fve', 'FvH4_3g19940' => 'fve', 'FvH4_4g04821' => 'fve', 'FvH4_4g31480' => 'fve', 'FvH4_7g01740' => 'fve', 'Glyma.05G130400' => 'gma', 'Glyma.05G156400' => 'gma', 'Glyma.07G197000' => 'gma', 'Glyma.08G085151' => 'gma', 'Glyma.08G114500' => 'gma', 'Glyma.08G300400' => 'gma', 'Glyma.10G215800' => 'gma', 'Glyma.12G224400' => 'gma', 'Glyma.13G179300' => 'gma', 'Glyma.13G218151' => 'gma', 'Glyma.13G238800' => 'gma', 'Glyma.13G276900' => 'gma', 'Glyma.14G078200' => 'gma', 'Glyma.15G074500' => 'gma', 'Glyma.15G094100' => 'gma', 'Glyma.17G247200' => 'gma', 'Glyma.18G120100' => 'gma', 'Glyma.20G176000' => 'gma', 'Gohir.A01G063600' => 'ghi', 'Gohir.A01G170301' => 'ghi', 'Gohir.A02G060500' => 'ghi', 'Gohir.A05G133850' => 'ghi', 'Gohir.A05G161400' => 'ghi', 'Gohir.A06G012900' => 'ghi', 'Gohir.A06G035901' => 'ghi', 'Gohir.A06G127100' => 'ghi', 'Gohir.A06G210500' => 'ghi', 'Gohir.A08G008650' => 'ghi', 'Gohir.A09G072700' => 'ghi', 'Gohir.A09G088301' => 'ghi', 'Gohir.A10G040600' => 'ghi', 'Gohir.A12G036300' => 'ghi', 'Gohir.A12G143350' => 'ghi', 'Gohir.A12G165500' => 'ghi', 'Gohir.A13G145700' => 'ghi', 'Gohir.D01G050000' => 'ghi', 'Gohir.D01G051366' => 'ghi', 'Gohir.D01G161350' => 'ghi', 'Gohir.D02G065900' => 'ghi', 'Gohir.D05G164200' => 'ghi', 'Gohir.D05G355500' => 'ghi', 'Gohir.D06G010400' => 'ghi', 'Gohir.D06G111250' => 'ghi', 'Gohir.D06G132000' => 'ghi', 'Gohir.D06G210500' => 'ghi', 'Gohir.D07G165675' => 'ghi', 'Gohir.D08G062240' => 'ghi', 'Gohir.D08G086101' => 'ghi', 'Gohir.D08G138060' => 'ghi', 'Gohir.D09G072300' => 'ghi', 'Gohir.D10G041400' => 'ghi', 'Gohir.D11G191020' => 'ghi', 'Gohir.D11G212066' => 'ghi', 'Gohir.D12G036300' => 'ghi', 'Gohir.D12G168600' => 'ghi', 'Gohir.D13G150600' => 'ghi', 'Gorai.001G057300' => 'gra', 'Gorai.002G069900' => 'gra', 'Gorai.002G200000' => 'gra', 'Gorai.003G067600' => 'gra', 'Gorai.005G074800' => 'gra', 'Gorai.006G087300' => 'gra', 'Gorai.008G037500' => 'gra', 'Gorai.008G181400' => 'gra', 'Gorai.009G169400' => 'gra', 'Gorai.009G387900' => 'gra', 'Gorai.010G013300' => 'gra', 'Gorai.010G153800' => 'gra', 'Gorai.010G255800' => 'gra', 'Gorai.011G043700' => 'gra', 'Gorai.011G198900' => 'gra', 'Gorai.013G168400' => 'gra', 'GSVIVG01005212001' => 'vvi', 'GSVIVG01006163001' => 'vvi', 'GSVIVG01009625001' => 'vvi', 'GSVIVG01014338001' => 'vvi', 'GSVIVG01020005001' => 'vvi', 'GSVIVG01021450001' => 'vvi', 'GSVIVG01023975001' => 'vvi', 'GSVIVG01034490001' => 'vvi', 'HanXRQChr04g0112071' => 'han', 'HanXRQChr05g0131151' => 'han', 'HanXRQChr09g0262371' => 'han', 'HanXRQChr09g0268401' => 'han', 'HanXRQChr10g0279241' => 'han', 'HanXRQChr10g0297961' => 'han', 'HanXRQChr11g0326231' => 'han', 'HanXRQChr11g0328471' => 'han', 'HanXRQChr16g0507941' => 'han', 'HanXRQChr17g0560211' => 'han', 'Haze_02108' => 'cav', 'Haze_02428' => 'cav', 'Haze_05593' => 'cav', 'Haze_06448' => 'cav', 'Haze_09427' => 'cav', 'Haze_12022' => 'cav', 'Haze_17612' => 'cav', 'Haze_17928' => 'cav', 'Hma1.2p1_0032F.1_g019250' => 'hma', 'Hma1.2p1_0163F.1_g072690' => 'hma', 'Hma1.2p1_0265F.1_g106710' => 'hma', 'Hma1.2p1_0286F.1_g113970' => 'hma', 'Hma1.2p1_0363F.1_g136640' => 'hma', 'Hma1.2p1_0584F.1_g183470' => 'hma', 'Hma1.2p1_0885F.1_g232570' => 'hma', 'HPP92_006022' => 'vpl', 'HPP92_007320' => 'vpl', 'HPP92_011521' => 'vpl', 'HPP92_019387' => 'vpl', 'HPP92_024038' => 'vpl', 'Hund05891' => 'sun', 'Hund06450' => 'sun', 'Hund12053' => 'sun', 'Hund16800' => 'sun', 'Hund21222' => 'sun', 'Hund22896' => 'sun', 'Hund23746' => 'sun', 'Hund27083' => 'sun', 'Lalb_Chr02g0141831' => 'lal', 'Lalb_Chr02g0141841' => 'lal', 'Lalb_Chr05g0220411' => 'lal', 'Lalb_Chr06g0162081' => 'lal', 'Lalb_Chr09g0327651' => 'lal', 'Lalb_Chr13g0295051' => 'lal', 'Lalb_Chr15g0086801' => 'lal', 'Lalb_Chr16g0383781' => 'lal', 'Lalb_Chr16g0383791' => 'lal', 'Lalb_Chr18g0055441' => 'lal', 'Lalb_Chr18g0059611' => 'lal', 'Lalb_Chr20g0109661' => 'lal', 'Lalb_Chr20g0109831' => 'lal', 'Lalb_Chr20g0121871' => 'lal', 'Lalb_Chr22g0355361' => 'lal', 'Lalb_Chr25g0286371' => 'lal', 'Lj1A1187G43' => 'lonja', 'Lj1A1205T50' => 'lonja', 'Lj1A800G33' => 'lonja', 'Lj1C1187T7' => 'lonja', 'Lj1C843T11' => 'lonja', 'Lj1g0010940' => 'lja', 'Lj2A288T69' => 'lonja', 'Lj3g0024276' => 'lja', 'Lj4A47T76' => 'lonja', 'Lj4g0005805' => 'lja', 'Lj4g0006097' => 'lja', 'Lj4g0008528' => 'lja', 'Lj4g0024907' => 'lja', 'Lj5g0012472' => 'lja', 'Lj5g0018648' => 'lja', 'Lj6C789G1' => 'lonja', 'Lj6g0004000' => 'lja', 'Lj7A292G67' => 'lonja', 'Lj7A292T64' => 'lonja', 'Lj9A400T58' => 'lonja', 'Lsat_1_v5_gn_1_126181' => 'lsa', 'Lsat_1_v5_gn_4_123041' => 'lsa', 'Lsat_1_v5_gn_4_133620' => 'lsa', 'Lsat_1_v5_gn_4_53221' => 'lsa', 'Lsat_1_v5_gn_4_71961' => 'lsa', 'Lsat_1_v5_gn_7_105241' => 'lsa', 'Lsat_1_v5_gn_7_21361' => 'lsa', 'Lsat_1_v5_gn_7_28860' => 'lsa', 'Lsat_1_v5_gn_7_31260' => 'lsa', 'Lsat_1_v5_gn_8_52801' => 'lsa', 'Manes.02G191400' => 'mes', 'Manes.03G110100' => 'mes', 'Manes.04G071100' => 'mes', 'Manes.05G100500' => 'mes', 'Manes.05G164700' => 'mes', 'Manes.15G087000' => 'mes', 'Manes.15G121500' => 'mes', 'Manes.16G028300' => 'mes', 'Manes.17G046100' => 'mes', 'Manes.17G069800' => 'mes', 'Manes.18G100500' => 'mes', 'Mapoly0002s0109' => 'mpo', 'Mapoly0024s0007' => 'mpo', 'Mapoly0089s0032' => 'mpo', 'MBI04_g42241_MAGBIO' => 'mbi', 'MBI05_g11988_MAGBIO' => 'mbi', 'MBI05_g35452_MAGBIO' => 'mbi', 'MBI07_g30179_MAGBIO' => 'mbi', 'MBI07_g35859_MAGBIO' => 'mbi', 'MBI07_g35860_MAGBIO' => 'mbi', 'MBI07_g37166_MAGBIO' => 'mbi', 'MBI08_g18172_MAGBIO' => 'mbi', 'MBI09_g08441_MAGBIO' => 'mbi', 'MBI13_g01676_MAGBIO' => 'mbi', 'MBI14_g42955_MAGBIO' => 'mbi', 'MBI16_g13161_MAGBIO' => 'mbi', 'MBI17_g27204_MAGBIO' => 'mbi', 'MBI19_g21595_MAGBIO' => 'mbi', 'MD00G1148400' => 'mdo', 'MD02G1301200' => 'mdo', 'MD03G1227800' => 'mdo', 'MD05G1041100' => 'mdo', 'MD05G1124800' => 'mdo', 'MD05G1284000' => 'mdo', 'MD05G1338800' => 'mdo', 'MD05G1338900' => 'mdo', 'MD07G1022800' => 'mdo', 'MD10G1047500' => 'mdo', 'MD10G1127500' => 'mdo', 'MD10G1262300' => 'mdo', 'MD10G1293800' => 'mdo', 'MD16G1074300' => 'mdo', 'Medtr1g021670' => 'mtr', 'Medtr1g096320' => 'mtr', 'Medtr2g013690' => 'mtr', 'Medtr2g019450' => 'mtr', 'Medtr2g085170' => 'mtr', 'Medtr4g088785' => 'mtr', 'Medtr8g055930' => 'mtr', 'Medtr8g085850' => 'mtr', 'MELO3C002605.2' => 'cme', 'MELO3C003891.2' => 'cme', 'MELO3C004012.2' => 'cme', 'MELO3C007134.2' => 'cme', 'MELO3C008118.2' => 'cme', 'MELO3C016700.2' => 'cme', 'MELO3C024127.2' => 'cme', 'MELO3C033361.2' => 'cme', 'MELO3C033362.2' => 'cme', 'Migut.C00430' => 'egut', 'Migut.C01246' => 'egut', 'Migut.E00101' => 'egut', 'Migut.H01486' => 'egut', 'Migut.H01939' => 'egut', 'Migut.K00360' => 'egut', 'Migut.M00910' => 'egut', 'Migut.M01139' => 'egut', 'Migut.N02677' => 'egut', 'MSTRG.13252' => 'ama', 'MSTRG.14701' => 'ama', 'MSTRG.1521' => 'ama', 'MSTRG.15884' => 'ama', 'MSTRG.16242' => 'ama', 'MSTRG.22285' => 'ama', 'MSTRG.22444' => 'ama', 'MSTRG.2349' => 'ama', 'MSTRG.26308' => 'ama', 'MSTRG.28296' => 'ama', 'MSTRG.9895' => 'ama', 'Nitab4.5_0000110g0060' => 'nta', 'Nitab4.5_0000420g0130' => 'nta', 'Nitab4.5_0000422g0030' => 'nta', 'Nitab4.5_0000560g0180' => 'nta', 'Nitab4.5_0000703g0100' => 'nta', 'Nitab4.5_0000786g0200' => 'nta', 'Nitab4.5_0001336g0020' => 'nta', 'Nitab4.5_0001796g0030' => 'nta', 'Nitab4.5_0003348g0060' => 'nta', 'Nitab4.5_0003698g0040' => 'nta', 'Nitab4.5_0003942g0090' => 'nta', 'Nitab4.5_0004775g0070' => 'nta', 'Nitab4.5_0004864g0030' => 'nta', 'Nitab4.5_0005615g0020' => 'nta', 'Nitab4.5_0009288g0030' => 'nta', 'Nitab4.5_0009341g0010' => 'nta', 'Nitab4.5_0009535g0010' => 'nta', 'Nn1g03995' => 'nnu', 'Nn1g04100' => 'nnu', 'Nn1g06530' => 'nnu', 'Nn3g16404' => 'nnu', 'Nn3g17212' => 'nnu', 'Nn3g20776' => 'nnu', 'Nn3g21923' => 'nnu', 'Nn5g27737' => 'nnu', 'Nn5g29461' => 'nnu', 'Nn7g38355' => 'nnu', 'Nn8g39873' => 'nnu', 'Oeu000548.2' => 'oeu', 'Oeu004672.1' => 'oeu', 'Oeu015605.2' => 'oeu', 'Oeu016092.1' => 'oeu', 'Oeu017879.3' => 'oeu', 'Oeu024910.1' => 'oeu', 'Oeu028965.1' => 'oeu', 'Oeu031269.1' => 'oeu', 'Oeu031270.1' => 'oeu', 'Oeu032535.1' => 'oeu', 'Oeu034151.1' => 'oeu', 'Oeu034152.1' => 'oeu', 'Oeu034588.2' => 'oeu', 'Oeu050846.1' => 'oeu', 'Oeu050849.2' => 'oeu', 'Oeu051063.2' => 'oeu', 'Oeu052368.1' => 'oeu', 'Oeu052370.1' => 'oeu', 'Os01g0210400' => 'osa', 'Os01g0304300' => 'osa', 'Os01g0749100' => 'osa', 'Os02g0745800' => 'osa', 'Os03g0769050' => 'osa', 'Os05g0531500' => 'osa', 'Os06g0724300' => 'osa', 'Os11g0198100' => 'osa', 'Peaxi162Scf00069g01425' => 'pax', 'Peaxi162Scf00280g00811' => 'pax', 'Peaxi162Scf00310g00615' => 'pax', 'Peaxi162Scf00362g00542' => 'pax', 'Peaxi162Scf00461g00310' => 'pax', 'Peaxi162Scf00530g00118' => 'pax', 'Peaxi162Scf00541g00057' => 'pax', 'Peaxi162Scf00661g00017' => 'pax', 'Peaxi162Scf00926g00027' => 'pax', 'Peaxi162Scf01064g00263' => 'pax', 'Peaxi162Scf01211g00135' => 'pax', 'PGR004G2336' => 'pgr', 'PGR042G0327' => 'pgr', 'PGR042G1957' => 'pgr', 'PGR042G2003' => 'pgr', 'PGR042G3929' => 'pgr', 'PGR083G1137' => 'pgr', 'PGR083G1364' => 'pgr', 'PGSC0003DMG400003381' => 'stu', 'PGSC0003DMG400003417' => 'stu', 'PGSC0003DMG400008981' => 'stu', 'PGSC0003DMG400012417' => 'stu', 'PGSC0003DMG400012823' => 'stu', 'PGSC0003DMG400016885' => 'stu', 'PGSC0003DMG400022812' => 'stu', 'PGSC0003DMG400029726' => 'stu', 'PGSC0003DMG401009243' => 'stu', 'PGSC0003DMG401031505' => 'stu', 'PGSC0003DMG402031505' => 'stu', 'Phvul.001G017600' => 'pvu', 'Phvul.002G193500' => 'pvu', 'Phvul.002G228900' => 'pvu', 'Phvul.002G236800' => 'pvu', 'Phvul.003G049500' => 'pvu', 'Phvul.005G072000' => 'pvu', 'Phvul.006G164800' => 'pvu', 'Phvul.006G185100' => 'pvu', 'Phvul.007G090000' => 'pvu', 'Potri.001G399800' => 'ptr', 'Potri.002G149900' => 'ptr', 'Potri.004G044100' => 'ptr', 'Potri.004G177600' => 'ptr', 'Potri.009G138000' => 'ptr', 'Potri.010G094000' => 'ptr', 'Potri.011G053000' => 'ptr', 'Potri.011G119300' => 'ptr', 'Potri.013G113700' => 'ptr', 'Potri.018G107800' => 'ptr', 'Potri.019G084100' => 'ptr', 'Pp3c14_23720' => 'ppa', 'Pp3c16_6340' => 'ppa', 'Pp3c23_13420' => 'ppa', 'Pp3c24_2740' => 'ppa', 'Pp3c25_860' => 'ppa', 'Pp3c8_21750' => 'ppa', 'Prupe.1G273000' => 'ppe', 'Prupe.1G273700' => 'ppe', 'Prupe.1G274100' => 'ppe', 'Prupe.2G023300' => 'ppe', 'Prupe.4G048000' => 'ppe', 'Prupe.4G080400' => 'ppe', 'Prupe.4G181200' => 'ppe', 'Prupe.8G056900' => 'ppe', 'Prupe.8G168700' => 'ppe', 'Psat1g189080' => 'psa', 'Psat1g204760' => 'psa', 'Psat4g175560' => 'psa', 'Psat4g177720' => 'psa', 'Psat5g244240' => 'psa', 'Psat6g010720' => 'psa', 'Psat6g187200' => 'psa', 'Psat7g072040' => 'psa', 'PSO017G3501' => 'pso', 'PSO063G2148' => 'pso', 'PSO063G5608' => 'pso', 'PSO210G6392' => 'pso', 'PSO541G2319' => 'pso', 'PSO541G2836' => 'pso', 'PSO541G4012' => 'pso', 'PSO541G6253' => 'pso', 'PSO675G0580' => 'pso', 'PSO675G0856' => 'pso', 'PSO675G5635' => 'pso', 'PSO675G9157' => 'pso', 'PSO832G1660' => 'pso', 'PSO832G1969' => 'pso', 'QL02p007186' => 'qlo', 'QL02p033904' => 'qlo', 'QL03p064391' => 'qlo', 'QL05p040593' => 'qlo', 'QL05p058242' => 'qlo', 'QL08p021825' => 'qlo', 'QL11p004981' => 'qlo', 'RcHm_v2.0_Chr1g0318301' => 'rch', 'RcHm_v2.0_Chr4g0418501' => 'rch', 'RcHm_v2.0_Chr4g0439971' => 'rch', 'RcHm_v2.0_Chr5g0008541' => 'rch', 'RcHm_v2.0_Chr5g0014101' => 'rch', 'RcHm_v2.0_Chr5g0014131' => 'rch', 'RcHm_v2.0_Chr5g0033621' => 'rch', 'RcHm_v2.0_Chr6g0272041' => 'rch', 'RcHm_v2.0_Chr6g0278831' => 'rch', 'Rhsim02G0130400' => 'rsi', 'Rhsim02G0171100' => 'rsi', 'Rhsim05G0053000' => 'rsi', 'Rhsim05G0053100' => 'rsi', 'Rhsim06G0096500' => 'rsi', 'Rhsim06G0096600' => 'rsi', 'Rhsim06G0199100' => 'rsi', 'Rhsim12G0062300' => 'rsi', 'Rhsim12G0062800' => 'rsi', 'Sabra02G0118600' => 'sbr', 'Sabra04G0027300' => 'sbr', 'Sabra04G0119500' => 'sbr', 'Sabra08G0112500' => 'sbr', 'Sabra11G0036800' => 'sbr', 'Sabra11G0103800' => 'sbr', 'Sabra13G0096300' => 'sbr', 'Sabra16G0262300' => 'sbr', 'Sabra18G0091700' => 'sbr', 'Sabra19G0095400' => 'sbr', 'SalBow6G3080' => 'sbo', 'SalBow7G1157' => 'sbo', 'SalBow7G2123' => 'sbo', 'SalBow7G2285' => 'sbo', 'SalBow7G3537' => 'sbo', 'SalBow8G2947' => 'sbo', 'SalBow8G4463' => 'sbo', 'SalBow8G5466' => 'sbo', 'Sc01g0001750' => 'sci', 'Sc02g0006640' => 'sci', 'Sc02g0006670' => 'sci', 'Sc04g0008220' => 'sci', 'Sc05g0006190' => 'sci', 'Sc08g0002760' => 'sci', 'Sc17g0006170' => 'sci', 'Sc22g0002050' => 'sci', 'Sc23g0001190' => 'sci', 'Sc24g0000980' => 'sci', 'Sed0006245' => 'sed', 'Sed0007543' => 'sed', 'Sed0009411' => 'sed', 'Sed0010765' => 'sed', 'Sed0012944' => 'sed', 'Sed0014682' => 'sed', 'Sed0016174' => 'sed', 'Sed0016796' => 'sed', 'Sed0020317' => 'sed', 'Sed0021467' => 'sed', 'SEGI_01316' => 'sgi', 'SEGI_03374' => 'sgi', 'SEGI_16265' => 'sgi', 'SEGI_18569' => 'sgi', 'SEGI_20351' => 'sgi', 'SEGI_26395' => 'sgi', 'SEGI_29469' => 'sgi', 'SEGI_34771' => 'sgi', 'SEGI_36769' => 'sgi', 'SEGI_37139' => 'sgi', 'SGA_v2.0_scaffold100G29687' => 'sas', 'SGA_v2.0_scaffold118G32472' => 'sas', 'SGA_v2.0_scaffold14G07051' => 'sas', 'SGA_v2.0_scaffold183G39845' => 'sas', 'SGA_v2.0_scaffold1G00174' => 'sas', 'SGA_v2.0_scaffold22G09714' => 'sas', 'SGA_v2.0_scaffold333G48992' => 'sas', 'SGA_v2.0_scaffold46G17491' => 'sas', 'SGA_v2.0_scaffold49G18294' => 'sas', 'SGA_v2.0_scaffold63G21658' => 'sas', 'SHI01741' => 'shi', 'SHI05771' => 'shi', 'SHI18077' => 'shi', 'SHI20525' => 'shi', 'SHI20527' => 'shi', 'SHI20528' => 'shi', 'SMO172G0185' => 'smo', 'SMO198G0020' => 'smo', 'SMO351G0006' => 'smo', 'SMO356G0118' => 'smo', 'SMO358G0296' => 'smo', 'SMO367G0079' => 'smo', 'SMO367G1277' => 'smo', 'Solyc01g014220.3' => 'sly', 'Solyc01g111770.2' => 'sly', 'Solyc02g078180.3' => 'sly', 'Solyc03g006430.3' => 'sly', 'Solyc03g006456.1' => 'sly', 'Solyc03g079860.2' => 'sly', 'Solyc04g079770.3' => 'sly', 'Solyc05g007430.4' => 'sly', 'Solyc07g063150.3' => 'sly', 'Solyc08g016620.3' => 'sly', 'Solyc09g057590.3' => 'sly', 'Solyc09g057600.1' => 'sly', 'Solyc10g009050.3' => 'sly', 'Solyc11g017420.2' => 'sly', 'Sopen01g053810' => 'spe', 'Sopen02g023040' => 'spe', 'Sopen03g002440' => 'spe', 'Sopen04g033350' => 'spe', 'Sopen05g003310' => 'spe', 'Sopen07g004050' => 'spe', 'Sopen07g031340' => 'spe', 'Sopen08g006990' => 'spe', 'Sopen10g004830' => 'spe', 'Sopen11g009370' => 'spe', 'Sp1g24450' => 'spa', 'Sp1g29670' => 'spa', 'Sp1g39600' => 'spa', 'Sp2g11080' => 'spa', 'Sp2g13970' => 'spa', 'Sp4g16130' => 'spa', 'Sp6g13080' => 'spa', 'Sp7g37270' => 'spa', 'TAR371G0065' => 'tar', 'TAR376G0340' => 'tar', 'TAR376G0435' => 'tar', 'TAR381G0002' => 'tar', 'TAR381G1236' => 'tar', 'TAR624G0055' => 'tar', 'TAR624G0324' => 'tar', 'TAR624G0696' => 'tar', 'TAR624G0906' => 'tar', 'TAR625G0107' => 'tar', 'TAR626G0015' => 'tar', 'TAR626G1356' => 'tar', 'TAR627G0888' => 'tar', 'TAR628G0399' => 'tar', 'TAR628G1327' => 'tar', 'TAR629G2831' => 'tar', 'TAR629G2874' => 'tar', 'TAR633G1432' => 'tar', 'TAR633G2771' => 'tar', 'THA.LOC104803394' => 'tha', 'THA.LOC104805153' => 'tha', 'THA.LOC104806784' => 'tha', 'THA.LOC104810473' => 'tha', 'THA.LOC104813100' => 'tha', 'THA.LOC104814215' => 'tha', 'THA.LOC104815554' => 'tha', 'THA.LOC104820544' => 'tha', 'THA.LOC104824754' => 'tha', 'THA.LOC104827717' => 'tha', 'Thecc.02G031400' => 'tca', 'Thecc.02G055900' => 'tca', 'Thecc.02G350800' => 'tca', 'Thecc.06G150900' => 'tca', 'Thecc.06G186600' => 'tca', 'Thecc.07G089600' => 'tca', 'Thecc.08G020400' => 'tca', 'Thecc.08G182100' => 'tca', 'Thhalv10000873m.g' => 'esa', 'Thhalv10004185m.g' => 'esa', 'Thhalv10006981m.g' => 'esa', 'Thhalv10007204m.g' => 'esa', 'Thhalv10011374m.g' => 'esa', 'Thhalv10013482m.g' => 'esa', 'Thhalv10017801m.g' => 'esa', 'Thhalv10024983m.g' => 'esa', 'TPR.G12072' => 'tpr', 'TPR.G15769' => 'tpr', 'TPR.G16504' => 'tpr', 'TPR.G16506' => 'tpr', 'TPR.G24345' => 'tpr', 'TPR.G26666' => 'tpr', 'TPR.G27320' => 'tpr', 'TPR.G31819' => 'tpr', 'TPR.G38879' => 'tpr', 'TPR.G39015' => 'tpr', 'TPR.G8819' => 'tpr', 'TWI09G0924' => 'twi', 'TWI12G0811' => 'twi', 'TWI12G1294' => 'twi', 'TWI31G0150' => 'twi', 'TWI36G1262' => 'twi', 'TWI38G1287' => 'twi', 'TWI38G1633' => 'twi', 'TWI38G1982' => 'twi', 'TWI39G0116' => 'twi', 'TWI60G1011' => 'twi', 'TWI63G0171' => 'twi', 'TWI73G0839' => 'twi', 'TWI79G1511' => 'twi', 'unitig_0.g915' => 'ugi', 'unitig_0.g916' => 'ugi', 'unitig_21.g20219' => 'ugi', 'unitig_21.g20416' => 'ugi', 'unitig_578.g16132' => 'ugi', 'unitig_578.g16718' => 'ugi', 'unitig_62.g23481' => 'ugi', 'unitig_744.g24535' => 'ugi', 'unitig_749.g13525' => 'ugi', 'vmacro01248' => 'vma', 'vmacro02290' => 'vma', 'vmacro10946' => 'vma', 'vmacro11865' => 'vma', 'vmacro12493' => 'vma', 'vmacro17322' => 'vma', 'vmacro21599' => 'vma', 'vmacro23041' => 'vma', 'VMungo0251G0004' => 'vmu', 'VMungo0251G2639' => 'vmu', 'VMungo0251G2967' => 'vmu', 'VMungo0540G0864' => 'vmu', 'VMungo0540G1569' => 'vmu', 'VMungo0647G0317' => 'vmu', 'VMungo0720G1373' => 'vmu', 'VMungo0720G1508' => 'vmu', 'VMungo1080G0485' => 'vmu', 'VMungo1215G3177' => 'vmu', 'Zm00001eb112600' => 'zma', 'Zm00001eb120220' => 'zma', 'Zm00001eb153240' => 'zma', 'Zm00001eb168880' => 'zma', 'Zm00001eb213920' => 'zma', 'Zm00001eb228280' => 'zma', 'Zm00001eb254580' => 'zma', 'Zm00001eb272180' => 'zma', 'Zm00001eb293190' => 'zma', 'Zm00001eb322930' => 'zma', 'Zm00001eb353360' => 'zma', 'Zm00001eb353390' => 'zma', 'Zm00001eb353430' => 'zma', 'Zm00001eb353440' => 'zma', 'Zm00001eb353780' => 'zma' ), 'gf_id' => 'HOM05D000499', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000499' ), 'data_identifier' => 'HOM05D000499', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000499', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1066', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p29780' => 'bna', 'A02p33180' => 'bna', 'A03p16470' => 'bna', 'A03p66010' => 'bna', 'A04p25970' => 'bna', 'A06p01270' => 'bna', 'A06p46080' => 'bna', 'A07p11400' => 'bna', 'A08p01840' => 'bna', 'A08p08230' => 'bna', 'A08p25740' => 'bna', 'A09p32070' => 'bna', 'A09p37830' => 'bna', 'A09p42840' => 'bna', 'A09p42850' => 'bna', 'Aa31LG10G2060' => 'aar', 'Aa31LG2G7410' => 'aar', 'Aa31LG6G10200' => 'aar', 'Aa31LG6G16680' => 'aar', 'Aa31LG6G8470' => 'aar', 'Aa31LG9G12730' => 'aar', 'Aa31LG9G13680' => 'aar', 'Aa31LG9G14920' => 'aar', 'Aa31LG9G6650' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4977' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5467' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3254' => 'aag', 'Actinidia02578' => 'ach', 'Actinidia07693' => 'ach', 'Actinidia08413' => 'ach', 'Actinidia08414' => 'ach', 'Actinidia15289' => 'ach', 'Actinidia19871' => 'ach', 'Actinidia21475' => 'ach', 'Actinidia22576' => 'ach', 'Actinidia28327' => 'ach', 'Actinidia32491' => 'ach', 'Actinidia39463' => 'ach', 'Actinidia39571' => 'ach', 'Ah.01g013750' => 'amhyb', 'Ah.01g023210' => 'amhyb', 'Ah.04g164850' => 'amhyb', 'Ah.05g178060' => 'amhyb', 'Ah.07g204270' => 'amhyb', 'Ah.07g208480' => 'amhyb', 'Ah.09g237410' => 'amhyb', 'Ah.14g089460' => 'amhyb', 'AL1G41790' => 'aly', 'AL1G49050' => 'aly', 'AL1G53810' => 'aly', 'AL1G61400' => 'aly', 'AL4G18580' => 'aly', 'AL5G12510' => 'aly', 'AL5G12540' => 'aly', 'AL6G43230' => 'aly', 'AL7G10370' => 'aly', 'AL7G19250' => 'aly', 'AL8G12240' => 'aly', 'AL8G18540' => 'aly', 'Aqoxy1G02409' => 'aox', 'Aqoxy2G03993' => 'aox', 'Aqoxy3G03357' => 'aox', 'Aqoxy4G00785' => 'aox', 'Aqoxy5G02598' => 'aox', 'Aqoxy6G00132' => 'aox', 'Aqoxy7G01776' => 'aox', 'Aqoxy7G02316' => 'aox', 'Aqoxy7G03973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.12AFKW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B8730' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27IQR1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3F75VG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3RE0GA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41TCQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.527VTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FIR39' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5W8UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DA38EV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ63HS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H1I32C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HC27T5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4M8AP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7N3CZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9UVDZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LS1NQA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT1D4B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SKC4TM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCFV76' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF9Q1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQWD9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1ZM88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WE07RT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YCK7VH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJE6Q6' => 'arhy', 'AT1G28240' => 'ath', 'AT1G34550' => 'ath', 'AT1G53040' => 'ath', 'AT2G02910' => 'ath', 'AT4G09630' => 'ath', 'AT4G38500' => 'ath', 'AT5G42660' => 'ath', 'AT5G46220' => 'ath', 'ATR0152G026' => 'atr', 'ATR0564G343' => 'atr', 'ATR0706G151' => 'atr', 'ATR0733G207' => 'atr', 'ATR0751G234' => 'atr', 'ATR0807G048' => 'atr', 'ATR1091G084' => 'atr', 'Atru.chr10.1229' => 'acertr', 'Atru.chr10.1230' => 'acertr', 'Atru.chr10.1874' => 'acertr', 'Atru.chr11.1808' => 'acertr', 'Atru.chr13.1795' => 'acertr', 'Atru.chr13.570' => 'acertr', 'Atru.chr2.2608' => 'acertr', 'Atru.chr2.2609' => 'acertr', 'Atru.chr5.3428' => 'acertr', 'Atru.chr8.1171' => 'acertr', 'AUR62004651' => 'cqu', 'AUR62008675' => 'cqu', 'AUR62010014' => 'cqu', 'AUR62013004' => 'cqu', 'AUR62014825' => 'cqu', 'AUR62015015' => 'cqu', 'AUR62015151' => 'cqu', 'AUR62017020' => 'cqu', 'AUR62019422' => 'cqu', 'AUR62023570' => 'cqu', 'AUR62025571' => 'cqu', 'AUR62029098' => 'cqu', 'AUR62033863' => 'cqu', 'AUR62034296' => 'cqu', 'AUR62040075' => 'cqu', 'BcaB02g07334' => 'bca', 'BcaB02g10575' => 'bca', 'BcaB03g12119' => 'bca', 'BcaB03g12120' => 'bca', 'BcaB03g13945' => 'bca', 'BcaB04g17123' => 'bca', 'BcaB04g17867' => 'bca', 'BcaB04g19839' => 'bca', 'BcaB07g30317' => 'bca', 'BcaB07g32432' => 'bca', 'BcaB07g33362' => 'bca', 'BcaB08g36611' => 'bca', 'BcaC01g00028' => 'bca', 'BcaC01g01356' => 'bca', 'BcaC01g02034' => 'bca', 'BcaC01g06051' => 'bca', 'BcaC03g16839' => 'bca', 'BcaC03g17176' => 'bca', 'BcaC05g26829' => 'bca', 'BcaC06g31490' => 'bca', 'BcaC06g35344' => 'bca', 'BcaC06g36570' => 'bca', 'BcaC07g37537' => 'bca', 'BcaC08g43491' => 'bca', 'BcaC08g43773' => 'bca', 'BcaNung00234' => 'bca', 'BcaNung01982' => 'bca', 'BcaNung03707' => 'bca', 'BcaNung06454' => 'bca', 'BolC2t10762H' => 'bol', 'BolC2t11191H' => 'bol', 'BolC3t14322H' => 'bol', 'BolC3t19747H' => 'bol', 'BolC3t21425H' => 'bol', 'BolC4t27800H' => 'bol', 'BolC5t31423H' => 'bol', 'BolC6t35951H' => 'bol', 'BolC6t36282H' => 'bol', 'BolC7t40678H' => 'bol', 'BolC7t40679H' => 'bol', 'BolC7t42222H' => 'bol', 'BolC7t43492H' => 'bol', 'BolC7t46785H' => 'bol', 'BolC8t47853H' => 'bol', 'BolC9t56805H' => 'bol', 'BraA02t08000Z' => 'bra', 'BraA02t08341Z' => 'bra', 'BraA03t10936Z' => 'bra', 'BraA03t15657Z' => 'bra', 'BraA04t18100Z' => 'bra', 'BraA05t20523Z' => 'bra', 'BraA06t23353Z' => 'bra', 'BraA06t27473Z' => 'bra', 'BraA06t27769Z' => 'bra', 'BraA07t28928Z' => 'bra', 'BraA08t32236Z' => 'bra', 'BraA08t32841Z' => 'bra', 'BraA08t34524Z' => 'bra', 'BraA09t38742Z' => 'bra', 'BraA09t39295Z' => 'bra', 'C02p47180' => 'bna', 'C02p50990' => 'bna', 'C03p19360' => 'bna', 'C03p74950' => 'bna', 'C03p91000' => 'bna', 'C04p63260' => 'bna', 'C05p27050' => 'bna', 'C06p08750' => 'bna', 'C06p11490' => 'bna', 'C07p02820' => 'bna', 'C07p17180' => 'bna', 'C07p29440' => 'bna', 'C07p63730' => 'bna', 'C09p39260' => 'bna', 'CAN.G1164.34' => 'can', 'CAN.G1164.39' => 'can', 'CAN.G1530.3' => 'can', 'CAN.G162.61' => 'can', 'CAN.G176.6' => 'can', 'CAN.G289.49' => 'can', 'CAN.G370.21' => 'can', 'CAN.G370.22' => 'can', 'CAN.G371.117' => 'can', 'CAN.G58.37' => 'can', 'CAN.G588.98' => 'can', 'CANSAT21G2266' => 'cansat', 'CANSAT25G2799' => 'cansat', 'CANSAT35G0862' => 'cansat', 'CANSAT35G1704' => 'cansat', 'CANSAT35G1760' => 'cansat', 'CANSAT56G3971' => 'cansat', 'CANSAT56G4116' => 'cansat', 'CANSAT80G1259' => 'cansat', 'CARHR027730' => 'chi', 'CARHR033880' => 'chi', 'CARHR043270' => 'chi', 'CARHR145330' => 'chi', 'CARHR145340' => 'chi', 'CARHR175570' => 'chi', 'CARHR181570' => 'chi', 'CARHR258470' => 'chi', 'CARHR260490' => 'chi', 'CARHR294220' => 'chi', 'Carub.0001s2668' => 'cru', 'Carub.0001s3257' => 'cru', 'Carub.0001s4220' => 'cru', 'Carub.0005s0179' => 'cru', 'Carub.0006s2807' => 'cru', 'Carub.0007s0039' => 'cru', 'Carub.0008s0169' => 'cru', 'Carub.0008s0636' => 'cru', 'Ca_00338_v3' => 'car', 'Ca_00542_v3' => 'car', 'Ca_01844_v3' => 'car', 'Ca_10611_v3' => 'car', 'Ca_13326_v3' => 'car', 'Ca_17944_v3' => 'car', 'Ca_18546_v3' => 'car', 'Ca_24219_v3' => 'car', 'Ca_29972_v3' => 'car', 'CBR_g3681' => 'cbr', 'CBR_g40021' => 'cbr', 'Cc01_g08140' => 'ccan', 'Cc02_g13410' => 'ccan', 'Cc02_g37480' => 'ccan', 'Cc05_g12030' => 'ccan', 'Cc09_g03370' => 'ccan', 'Cc09_g10300' => 'ccan', 'Cc10_g03530' => 'ccan', 'Cc10_g11380' => 'ccan', 'CDE01G0176' => 'cde', 'CDE02G0675' => 'cde', 'CDE02G0942' => 'cde', 'CDE02G1153' => 'cde', 'CDE02G4177' => 'cde', 'CDE04G2117' => 'cde', 'CDE04G2736' => 'cde', 'CDE08G1161' => 'cde', 'CDE09G1238' => 'cde', 'Cfa000467' => 'cfa', 'Cfa000947' => 'cfa', 'Cfa004969' => 'cfa', 'Cfa005284' => 'cfa', 'Cfa008993' => 'cfa', 'Cfa018187' => 'cfa', 'Cfa018454' => 'cfa', 'Cfa020585' => 'cfa', 'Ciclev10000424m.g' => 'ccl', 'Ciclev10003605m.g' => 'ccl', 'Ciclev10007828m.g' => 'ccl', 'Ciclev10014620m.g' => 'ccl', 'Ciclev10015169m.g' => 'ccl', 'Ciclev10018291m.g' => 'ccl', 'Ciclev10028256m.g' => 'ccl', 'Ciclev10033822m.g' => 'ccl', 'CiPaw.05G060300' => 'cil', 'CiPaw.05G085000' => 'cil', 'CiPaw.06G083700' => 'cil', 'CiPaw.06G120300' => 'cil', 'CiPaw.09G060500' => 'cil', 'CiPaw.09G123800' => 'cil', 'CiPaw.11G169700' => 'cil', 'CiPaw.12G118300' => 'cil', 'CiPaw.15G071000' => 'cil', 'CiPaw.15G081900' => 'cil', 'ClCG01G024610' => 'cla', 'ClCG03G006070' => 'cla', 'ClCG05G019250' => 'cla', 'ClCG09G009500' => 'cla', 'ClCG11G008200' => 'cla', 'ClCG11G018080' => 'cla', 'COL.COLO4_17373' => 'col', 'COL.COLO4_22994' => 'col', 'COL.COLO4_26389' => 'col', 'COL.COLO4_27170' => 'col', 'COL.COLO4_31074' => 'col', 'COL.COLO4_31465' => 'col', 'COL.COLO4_36438' => 'col', 'COL.COLO4_36439' => 'col', 'Cpa.g.c38781' => 'cpa', 'Cpa.g.sc128.12' => 'cpa', 'Cpa.g.sc166.7' => 'cpa', 'Cpa.g.sc166.8' => 'cpa', 'Cpa.g.sc20.111' => 'cpa', 'Cpa.g.sc27.31' => 'cpa', 'Cpa.g.sc64.36' => 'cpa', 'Cpa.g.sc64.37' => 'cpa', 'Cpa.g.sc66.49' => 'cpa', 'Cpa.g.sc80.64' => 'cpa', 'CsaV3_1G012320' => 'csa', 'CsaV3_2G008480' => 'csa', 'CsaV3_2G033450' => 'csa', 'CsaV3_3G044830' => 'csa', 'CsaV3_4G033710' => 'csa', 'CsaV3_6G051730' => 'csa', 'CsaV3_7G025350' => 'csa', 'CSS0001067' => 'camsi', 'CSS0005996' => 'camsi', 'CSS0006590' => 'camsi', 'CSS0009673' => 'camsi', 'CSS0010201' => 'camsi', 'CSS0010549' => 'camsi', 'CSS0011364' => 'camsi', 'CSS0014473' => 'camsi', 'CSS0014961' => 'camsi', 'CSS0020191' => 'camsi', 'CSS0021165' => 'camsi', 'CSS0022306' => 'camsi', 'CSS0030591' => 'camsi', 'CSS0030696' => 'camsi', 'CSS0032653' => 'camsi', 'CSS0037487' => 'camsi', 'CSS0041102' => 'camsi', 'CSS0041261' => 'camsi', 'CSS0046246' => 'camsi', 'CSS0049256' => 'camsi', 'DCAR_004075' => 'dca', 'DCAR_011538' => 'dca', 'DCAR_019553' => 'dca', 'DCAR_020952' => 'dca', 'DCAR_021739' => 'dca', 'DCAR_027407' => 'dca', 'DCAR_027913' => 'dca', 'DCAR_028066' => 'dca', 'Dinv05899' => 'din', 'Dinv07563' => 'din', 'Dinv08010' => 'din', 'Dinv14125' => 'din', 'Dinv20172' => 'din', 'Dinv30743' => 'din', 'Dinv31229' => 'din', 'Dinv34162' => 'din', 'Dinv36028' => 'din', 'Dinv39368' => 'din', 'Dinv40565' => 'din', 'Dinv41706' => 'din', 'Duzib052G0089' => 'dzi', 'Duzib116G0641' => 'dzi', 'Duzib132G0069' => 'dzi', 'Duzib132G1219' => 'dzi', 'Duzib147G0278' => 'dzi', 'Duzib160G0480' => 'dzi', 'Duzib170G0661' => 'dzi', 'Duzib177G0591' => 'dzi', 'Duzib187G1353' => 'dzi', 'Duzib192G0858' => 'dzi', 'Duzib192G0883' => 'dzi', 'Duzib213G0506' => 'dzi', 'Duzib235G0289' => 'dzi', 'Duzib251G0422' => 'dzi', 'ECA232G3898' => 'eca', 'ECA233G5950' => 'eca', 'ECA234G1699' => 'eca', 'ECA234G2421' => 'eca', 'ECA236G0426' => 'eca', 'ECA236G4331' => 'eca', 'ECA248G2573' => 'eca', 'EL10Ac1g00077' => 'bvu', 'EL10Ac1g01746' => 'bvu', 'EL10Ac2g03464' => 'bvu', 'EL10Ac4g08176' => 'bvu', 'EL10Ac7g17521' => 'bvu', 'EL10Ac8g20386' => 'bvu', 'EL10Ac9g21343' => 'bvu', 'EL10Ac9g22688' => 'bvu', 'Eucgr.B03434' => 'egr', 'Eucgr.D00618' => 'egr', 'Eucgr.E02395' => 'egr', 'Eucgr.F01129' => 'egr', 'Eucgr.F02622' => 'egr', 'Eucgr.F04207' => 'egr', 'FAN01G0570' => 'fan', 'FAN03G3351' => 'fan', 'FAN06G3702' => 'fan', 'FAN07G2149' => 'fan', 'FAN10G3758' => 'fan', 'FAN11G1170' => 'fan', 'FAN11G2050' => 'fan', 'FAN11G2724' => 'fan', 'FAN12G1700' => 'fan', 'FAN12G2028' => 'fan', 'FAN15G1160' => 'fan', 'FAN15G3063' => 'fan', 'FAN16G2540' => 'fan', 'FAN16G3077' => 'fan', 'FAN16G3624' => 'fan', 'FAN17G0221' => 'fan', 'FAN20G2492' => 'fan', 'FAN20G2905' => 'fan', 'FAN21G0548' => 'fan', 'FAN21G1300' => 'fan', 'FAN22G0077' => 'fan', 'FAN22G1315' => 'fan', 'FAN24G1280' => 'fan', 'FAN24G1445' => 'fan', 'FAN24G3527' => 'fan', 'FAN25G0464' => 'fan', 'FAN25G2885' => 'fan', 'FAN25G3270' => 'fan', 'FAN27G1101' => 'fan', 'FAN27G2846' => 'fan', 'FAN27G3524' => 'fan', 'FvH4_2g11770' => 'fve', 'FvH4_2g15630' => 'fve', 'FvH4_3g05570' => 'fve', 'FvH4_3g09110' => 'fve', 'FvH4_3g19940' => 'fve', 'FvH4_4g04821' => 'fve', 'FvH4_4g31480' => 'fve', 'FvH4_7g01740' => 'fve', 'Glyma.05G130400' => 'gma', 'Glyma.05G156400' => 'gma', 'Glyma.07G197000' => 'gma', 'Glyma.08G085151' => 'gma', 'Glyma.08G114500' => 'gma', 'Glyma.08G300400' => 'gma', 'Glyma.10G215800' => 'gma', 'Glyma.12G224400' => 'gma', 'Glyma.13G179300' => 'gma', 'Glyma.13G218151' => 'gma', 'Glyma.13G238800' => 'gma', 'Glyma.13G276900' => 'gma', 'Glyma.14G078200' => 'gma', 'Glyma.15G074500' => 'gma', 'Glyma.15G094100' => 'gma', 'Glyma.17G247200' => 'gma', 'Glyma.18G120100' => 'gma', 'Glyma.20G176000' => 'gma', 'Gohir.A01G063600' => 'ghi', 'Gohir.A01G170301' => 'ghi', 'Gohir.A02G060500' => 'ghi', 'Gohir.A05G133850' => 'ghi', 'Gohir.A05G161400' => 'ghi', 'Gohir.A06G012900' => 'ghi', 'Gohir.A06G035901' => 'ghi', 'Gohir.A06G127100' => 'ghi', 'Gohir.A06G210500' => 'ghi', 'Gohir.A08G008650' => 'ghi', 'Gohir.A09G072700' => 'ghi', 'Gohir.A09G088301' => 'ghi', 'Gohir.A10G040600' => 'ghi', 'Gohir.A12G036300' => 'ghi', 'Gohir.A12G143350' => 'ghi', 'Gohir.A12G165500' => 'ghi', 'Gohir.A13G145700' => 'ghi', 'Gohir.D01G050000' => 'ghi', 'Gohir.D01G051366' => 'ghi', 'Gohir.D01G161350' => 'ghi', 'Gohir.D02G065900' => 'ghi', 'Gohir.D05G164200' => 'ghi', 'Gohir.D05G355500' => 'ghi', 'Gohir.D06G010400' => 'ghi', 'Gohir.D06G111250' => 'ghi', 'Gohir.D06G132000' => 'ghi', 'Gohir.D06G210500' => 'ghi', 'Gohir.D07G165675' => 'ghi', 'Gohir.D08G062240' => 'ghi', 'Gohir.D08G086101' => 'ghi', 'Gohir.D08G138060' => 'ghi', 'Gohir.D09G072300' => 'ghi', 'Gohir.D10G041400' => 'ghi', 'Gohir.D11G191020' => 'ghi', 'Gohir.D11G212066' => 'ghi', 'Gohir.D12G036300' => 'ghi', 'Gohir.D12G168600' => 'ghi', 'Gohir.D13G150600' => 'ghi', 'Gorai.001G057300' => 'gra', 'Gorai.002G069900' => 'gra', 'Gorai.002G200000' => 'gra', 'Gorai.003G067600' => 'gra', 'Gorai.005G074800' => 'gra', 'Gorai.006G087300' => 'gra', 'Gorai.008G037500' => 'gra', 'Gorai.008G181400' => 'gra', 'Gorai.009G169400' => 'gra', 'Gorai.009G387900' => 'gra', 'Gorai.010G013300' => 'gra', 'Gorai.010G153800' => 'gra', 'Gorai.010G255800' => 'gra', 'Gorai.011G043700' => 'gra', 'Gorai.011G198900' => 'gra', 'Gorai.013G168400' => 'gra', 'GSVIVG01005212001' => 'vvi', 'GSVIVG01006163001' => 'vvi', 'GSVIVG01009625001' => 'vvi', 'GSVIVG01014338001' => 'vvi', 'GSVIVG01020005001' => 'vvi', 'GSVIVG01021450001' => 'vvi', 'GSVIVG01023975001' => 'vvi', 'GSVIVG01034490001' => 'vvi', 'HanXRQChr04g0112071' => 'han', 'HanXRQChr05g0131151' => 'han', 'HanXRQChr09g0262371' => 'han', 'HanXRQChr09g0268401' => 'han', 'HanXRQChr10g0279241' => 'han', 'HanXRQChr10g0297961' => 'han', 'HanXRQChr11g0326231' => 'han', 'HanXRQChr11g0328471' => 'han', 'HanXRQChr16g0507941' => 'han', 'HanXRQChr17g0560211' => 'han', 'Haze_02108' => 'cav', 'Haze_02428' => 'cav', 'Haze_05593' => 'cav', 'Haze_06448' => 'cav', 'Haze_09427' => 'cav', 'Haze_12022' => 'cav', 'Haze_17612' => 'cav', 'Haze_17928' => 'cav', 'Hma1.2p1_0032F.1_g019250' => 'hma', 'Hma1.2p1_0163F.1_g072690' => 'hma', 'Hma1.2p1_0265F.1_g106710' => 'hma', 'Hma1.2p1_0286F.1_g113970' => 'hma', 'Hma1.2p1_0363F.1_g136640' => 'hma', 'Hma1.2p1_0584F.1_g183470' => 'hma', 'Hma1.2p1_0885F.1_g232570' => 'hma', 'HPP92_006022' => 'vpl', 'HPP92_007320' => 'vpl', 'HPP92_011521' => 'vpl', 'HPP92_019387' => 'vpl', 'HPP92_024038' => 'vpl', 'Hund05891' => 'sun', 'Hund06450' => 'sun', 'Hund12053' => 'sun', 'Hund16800' => 'sun', 'Hund21222' => 'sun', 'Hund22896' => 'sun', 'Hund23746' => 'sun', 'Hund27083' => 'sun', 'Lalb_Chr02g0141831' => 'lal', 'Lalb_Chr02g0141841' => 'lal', 'Lalb_Chr05g0220411' => 'lal', 'Lalb_Chr06g0162081' => 'lal', 'Lalb_Chr09g0327651' => 'lal', 'Lalb_Chr13g0295051' => 'lal', 'Lalb_Chr15g0086801' => 'lal', 'Lalb_Chr16g0383781' => 'lal', 'Lalb_Chr16g0383791' => 'lal', 'Lalb_Chr18g0055441' => 'lal', 'Lalb_Chr18g0059611' => 'lal', 'Lalb_Chr20g0109661' => 'lal', 'Lalb_Chr20g0109831' => 'lal', 'Lalb_Chr20g0121871' => 'lal', 'Lalb_Chr22g0355361' => 'lal', 'Lalb_Chr25g0286371' => 'lal', 'Lj1A1187G43' => 'lonja', 'Lj1A1205T50' => 'lonja', 'Lj1A800G33' => 'lonja', 'Lj1C1187T7' => 'lonja', 'Lj1C843T11' => 'lonja', 'Lj1g0010940' => 'lja', 'Lj2A288T69' => 'lonja', 'Lj3g0024276' => 'lja', 'Lj4A47T76' => 'lonja', 'Lj4g0005805' => 'lja', 'Lj4g0006097' => 'lja', 'Lj4g0008528' => 'lja', 'Lj4g0024907' => 'lja', 'Lj5g0012472' => 'lja', 'Lj5g0018648' => 'lja', 'Lj6C789G1' => 'lonja', 'Lj6g0004000' => 'lja', 'Lj7A292G67' => 'lonja', 'Lj7A292T64' => 'lonja', 'Lj9A400T58' => 'lonja', 'Lsat_1_v5_gn_1_126181' => 'lsa', 'Lsat_1_v5_gn_4_123041' => 'lsa', 'Lsat_1_v5_gn_4_133620' => 'lsa', 'Lsat_1_v5_gn_4_53221' => 'lsa', 'Lsat_1_v5_gn_4_71961' => 'lsa', 'Lsat_1_v5_gn_7_105241' => 'lsa', 'Lsat_1_v5_gn_7_21361' => 'lsa', 'Lsat_1_v5_gn_7_28860' => 'lsa', 'Lsat_1_v5_gn_7_31260' => 'lsa', 'Lsat_1_v5_gn_8_52801' => 'lsa', 'Manes.02G191400' => 'mes', 'Manes.03G110100' => 'mes', 'Manes.04G071100' => 'mes', 'Manes.05G100500' => 'mes', 'Manes.05G164700' => 'mes', 'Manes.15G087000' => 'mes', 'Manes.15G121500' => 'mes', 'Manes.16G028300' => 'mes', 'Manes.17G046100' => 'mes', 'Manes.17G069800' => 'mes', 'Manes.18G100500' => 'mes', 'Mapoly0002s0109' => 'mpo', 'Mapoly0024s0007' => 'mpo', 'Mapoly0089s0032' => 'mpo', 'MBI04_g42241_MAGBIO' => 'mbi', 'MBI05_g11988_MAGBIO' => 'mbi', 'MBI05_g35452_MAGBIO' => 'mbi', 'MBI07_g30179_MAGBIO' => 'mbi', 'MBI07_g35859_MAGBIO' => 'mbi', 'MBI07_g35860_MAGBIO' => 'mbi', 'MBI07_g37166_MAGBIO' => 'mbi', 'MBI08_g18172_MAGBIO' => 'mbi', 'MBI09_g08441_MAGBIO' => 'mbi', 'MBI13_g01676_MAGBIO' => 'mbi', 'MBI14_g42955_MAGBIO' => 'mbi', 'MBI16_g13161_MAGBIO' => 'mbi', 'MBI17_g27204_MAGBIO' => 'mbi', 'MBI19_g21595_MAGBIO' => 'mbi', 'MD00G1148400' => 'mdo', 'MD02G1301200' => 'mdo', 'MD03G1227800' => 'mdo', 'MD05G1041100' => 'mdo', 'MD05G1124800' => 'mdo', 'MD05G1284000' => 'mdo', 'MD05G1338800' => 'mdo', 'MD05G1338900' => 'mdo', 'MD07G1022800' => 'mdo', 'MD10G1047500' => 'mdo', 'MD10G1127500' => 'mdo', 'MD10G1262300' => 'mdo', 'MD10G1293800' => 'mdo', 'MD16G1074300' => 'mdo', 'Medtr1g021670' => 'mtr', 'Medtr1g096320' => 'mtr', 'Medtr2g013690' => 'mtr', 'Medtr2g019450' => 'mtr', 'Medtr2g085170' => 'mtr', 'Medtr4g088785' => 'mtr', 'Medtr8g055930' => 'mtr', 'Medtr8g085850' => 'mtr', 'MELO3C002605.2' => 'cme', 'MELO3C003891.2' => 'cme', 'MELO3C004012.2' => 'cme', 'MELO3C007134.2' => 'cme', 'MELO3C008118.2' => 'cme', 'MELO3C016700.2' => 'cme', 'MELO3C024127.2' => 'cme', 'MELO3C033361.2' => 'cme', 'MELO3C033362.2' => 'cme', 'Migut.C00430' => 'egut', 'Migut.C01246' => 'egut', 'Migut.E00101' => 'egut', 'Migut.H01486' => 'egut', 'Migut.H01939' => 'egut', 'Migut.K00360' => 'egut', 'Migut.M00910' => 'egut', 'Migut.M01139' => 'egut', 'Migut.N02677' => 'egut', 'MSTRG.13252' => 'ama', 'MSTRG.14701' => 'ama', 'MSTRG.1521' => 'ama', 'MSTRG.15884' => 'ama', 'MSTRG.16242' => 'ama', 'MSTRG.22285' => 'ama', 'MSTRG.22444' => 'ama', 'MSTRG.2349' => 'ama', 'MSTRG.26308' => 'ama', 'MSTRG.28296' => 'ama', 'MSTRG.9895' => 'ama', 'Nitab4.5_0000110g0060' => 'nta', 'Nitab4.5_0000420g0130' => 'nta', 'Nitab4.5_0000422g0030' => 'nta', 'Nitab4.5_0000560g0180' => 'nta', 'Nitab4.5_0000703g0100' => 'nta', 'Nitab4.5_0000786g0200' => 'nta', 'Nitab4.5_0001336g0020' => 'nta', 'Nitab4.5_0001796g0030' => 'nta', 'Nitab4.5_0003348g0060' => 'nta', 'Nitab4.5_0003698g0040' => 'nta', 'Nitab4.5_0003942g0090' => 'nta', 'Nitab4.5_0004775g0070' => 'nta', 'Nitab4.5_0004864g0030' => 'nta', 'Nitab4.5_0005615g0020' => 'nta', 'Nitab4.5_0009288g0030' => 'nta', 'Nitab4.5_0009341g0010' => 'nta', 'Nitab4.5_0009535g0010' => 'nta', 'Nn1g03995' => 'nnu', 'Nn1g04100' => 'nnu', 'Nn1g06530' => 'nnu', 'Nn3g16404' => 'nnu', 'Nn3g17212' => 'nnu', 'Nn3g20776' => 'nnu', 'Nn3g21923' => 'nnu', 'Nn5g27737' => 'nnu', 'Nn5g29461' => 'nnu', 'Nn7g38355' => 'nnu', 'Nn8g39873' => 'nnu', 'Oeu000548.2' => 'oeu', 'Oeu004672.1' => 'oeu', 'Oeu015605.2' => 'oeu', 'Oeu016092.1' => 'oeu', 'Oeu017879.3' => 'oeu', 'Oeu024910.1' => 'oeu', 'Oeu028965.1' => 'oeu', 'Oeu031269.1' => 'oeu', 'Oeu031270.1' => 'oeu', 'Oeu032535.1' => 'oeu', 'Oeu034151.1' => 'oeu', 'Oeu034152.1' => 'oeu', 'Oeu034588.2' => 'oeu', 'Oeu050846.1' => 'oeu', 'Oeu050849.2' => 'oeu', 'Oeu051063.2' => 'oeu', 'Oeu052368.1' => 'oeu', 'Oeu052370.1' => 'oeu', 'Os01g0210400' => 'osa', 'Os01g0304300' => 'osa', 'Os01g0749100' => 'osa', 'Os02g0745800' => 'osa', 'Os03g0769050' => 'osa', 'Os05g0531500' => 'osa', 'Os06g0724300' => 'osa', 'Os11g0198100' => 'osa', 'Peaxi162Scf00069g01425' => 'pax', 'Peaxi162Scf00280g00811' => 'pax', 'Peaxi162Scf00310g00615' => 'pax', 'Peaxi162Scf00362g00542' => 'pax', 'Peaxi162Scf00461g00310' => 'pax', 'Peaxi162Scf00530g00118' => 'pax', 'Peaxi162Scf00541g00057' => 'pax', 'Peaxi162Scf00661g00017' => 'pax', 'Peaxi162Scf00926g00027' => 'pax', 'Peaxi162Scf01064g00263' => 'pax', 'Peaxi162Scf01211g00135' => 'pax', 'PGR004G2336' => 'pgr', 'PGR042G0327' => 'pgr', 'PGR042G1957' => 'pgr', 'PGR042G2003' => 'pgr', 'PGR042G3929' => 'pgr', 'PGR083G1137' => 'pgr', 'PGR083G1364' => 'pgr', 'PGSC0003DMG400003381' => 'stu', 'PGSC0003DMG400003417' => 'stu', 'PGSC0003DMG400008981' => 'stu', 'PGSC0003DMG400012417' => 'stu', 'PGSC0003DMG400012823' => 'stu', 'PGSC0003DMG400016885' => 'stu', 'PGSC0003DMG400022812' => 'stu', 'PGSC0003DMG400029726' => 'stu', 'PGSC0003DMG401009243' => 'stu', 'PGSC0003DMG401031505' => 'stu', 'PGSC0003DMG402031505' => 'stu', 'Phvul.001G017600' => 'pvu', 'Phvul.002G193500' => 'pvu', 'Phvul.002G228900' => 'pvu', 'Phvul.002G236800' => 'pvu', 'Phvul.003G049500' => 'pvu', 'Phvul.005G072000' => 'pvu', 'Phvul.006G164800' => 'pvu', 'Phvul.006G185100' => 'pvu', 'Phvul.007G090000' => 'pvu', 'Potri.001G399800' => 'ptr', 'Potri.002G149900' => 'ptr', 'Potri.004G044100' => 'ptr', 'Potri.004G177600' => 'ptr', 'Potri.009G138000' => 'ptr', 'Potri.010G094000' => 'ptr', 'Potri.011G053000' => 'ptr', 'Potri.011G119300' => 'ptr', 'Potri.013G113700' => 'ptr', 'Potri.018G107800' => 'ptr', 'Potri.019G084100' => 'ptr', 'Pp3c14_23720' => 'ppa', 'Pp3c16_6340' => 'ppa', 'Pp3c23_13420' => 'ppa', 'Pp3c24_2740' => 'ppa', 'Pp3c25_860' => 'ppa', 'Pp3c8_21750' => 'ppa', 'Prupe.1G273000' => 'ppe', 'Prupe.1G273700' => 'ppe', 'Prupe.1G274100' => 'ppe', 'Prupe.2G023300' => 'ppe', 'Prupe.4G048000' => 'ppe', 'Prupe.4G080400' => 'ppe', 'Prupe.4G181200' => 'ppe', 'Prupe.8G056900' => 'ppe', 'Prupe.8G168700' => 'ppe', 'Psat1g189080' => 'psa', 'Psat1g204760' => 'psa', 'Psat4g175560' => 'psa', 'Psat4g177720' => 'psa', 'Psat5g244240' => 'psa', 'Psat6g010720' => 'psa', 'Psat6g187200' => 'psa', 'Psat7g072040' => 'psa', 'PSO017G3501' => 'pso', 'PSO063G2148' => 'pso', 'PSO063G5608' => 'pso', 'PSO210G6392' => 'pso', 'PSO541G2319' => 'pso', 'PSO541G2836' => 'pso', 'PSO541G4012' => 'pso', 'PSO541G6253' => 'pso', 'PSO675G0580' => 'pso', 'PSO675G0856' => 'pso', 'PSO675G5635' => 'pso', 'PSO675G9157' => 'pso', 'PSO832G1660' => 'pso', 'PSO832G1969' => 'pso', 'QL02p007186' => 'qlo', 'QL02p033904' => 'qlo', 'QL03p064391' => 'qlo', 'QL05p040593' => 'qlo', 'QL05p058242' => 'qlo', 'QL08p021825' => 'qlo', 'QL11p004981' => 'qlo', 'RcHm_v2.0_Chr1g0318301' => 'rch', 'RcHm_v2.0_Chr4g0418501' => 'rch', 'RcHm_v2.0_Chr4g0439971' => 'rch', 'RcHm_v2.0_Chr5g0008541' => 'rch', 'RcHm_v2.0_Chr5g0014101' => 'rch', 'RcHm_v2.0_Chr5g0014131' => 'rch', 'RcHm_v2.0_Chr5g0033621' => 'rch', 'RcHm_v2.0_Chr6g0272041' => 'rch', 'RcHm_v2.0_Chr6g0278831' => 'rch', 'Rhsim02G0130400' => 'rsi', 'Rhsim02G0171100' => 'rsi', 'Rhsim05G0053000' => 'rsi', 'Rhsim05G0053100' => 'rsi', 'Rhsim06G0096500' => 'rsi', 'Rhsim06G0096600' => 'rsi', 'Rhsim06G0199100' => 'rsi', 'Rhsim12G0062300' => 'rsi', 'Rhsim12G0062800' => 'rsi', 'Sabra02G0118600' => 'sbr', 'Sabra04G0027300' => 'sbr', 'Sabra04G0119500' => 'sbr', 'Sabra08G0112500' => 'sbr', 'Sabra11G0036800' => 'sbr', 'Sabra11G0103800' => 'sbr', 'Sabra13G0096300' => 'sbr', 'Sabra16G0262300' => 'sbr', 'Sabra18G0091700' => 'sbr', 'Sabra19G0095400' => 'sbr', 'SalBow6G3080' => 'sbo', 'SalBow7G1157' => 'sbo', 'SalBow7G2123' => 'sbo', 'SalBow7G2285' => 'sbo', 'SalBow7G3537' => 'sbo', 'SalBow8G2947' => 'sbo', 'SalBow8G4463' => 'sbo', 'SalBow8G5466' => 'sbo', 'Sc01g0001750' => 'sci', 'Sc02g0006640' => 'sci', 'Sc02g0006670' => 'sci', 'Sc04g0008220' => 'sci', 'Sc05g0006190' => 'sci', 'Sc08g0002760' => 'sci', 'Sc17g0006170' => 'sci', 'Sc22g0002050' => 'sci', 'Sc23g0001190' => 'sci', 'Sc24g0000980' => 'sci', 'Sed0006245' => 'sed', 'Sed0007543' => 'sed', 'Sed0009411' => 'sed', 'Sed0010765' => 'sed', 'Sed0012944' => 'sed', 'Sed0014682' => 'sed', 'Sed0016174' => 'sed', 'Sed0016796' => 'sed', 'Sed0020317' => 'sed', 'Sed0021467' => 'sed', 'SEGI_01316' => 'sgi', 'SEGI_03374' => 'sgi', 'SEGI_16265' => 'sgi', 'SEGI_18569' => 'sgi', 'SEGI_20351' => 'sgi', 'SEGI_26395' => 'sgi', 'SEGI_29469' => 'sgi', 'SEGI_34771' => 'sgi', 'SEGI_36769' => 'sgi', 'SEGI_37139' => 'sgi', 'SGA_v2.0_scaffold100G29687' => 'sas', 'SGA_v2.0_scaffold118G32472' => 'sas', 'SGA_v2.0_scaffold14G07051' => 'sas', 'SGA_v2.0_scaffold183G39845' => 'sas', 'SGA_v2.0_scaffold1G00174' => 'sas', 'SGA_v2.0_scaffold22G09714' => 'sas', 'SGA_v2.0_scaffold333G48992' => 'sas', 'SGA_v2.0_scaffold46G17491' => 'sas', 'SGA_v2.0_scaffold49G18294' => 'sas', 'SGA_v2.0_scaffold63G21658' => 'sas', 'SHI01741' => 'shi', 'SHI05771' => 'shi', 'SHI18077' => 'shi', 'SHI20525' => 'shi', 'SHI20527' => 'shi', 'SHI20528' => 'shi', 'SMO172G0185' => 'smo', 'SMO198G0020' => 'smo', 'SMO351G0006' => 'smo', 'SMO356G0118' => 'smo', 'SMO358G0296' => 'smo', 'SMO367G0079' => 'smo', 'SMO367G1277' => 'smo', 'Solyc01g014220.3' => 'sly', 'Solyc01g111770.2' => 'sly', 'Solyc02g078180.3' => 'sly', 'Solyc03g006430.3' => 'sly', 'Solyc03g006456.1' => 'sly', 'Solyc03g079860.2' => 'sly', 'Solyc04g079770.3' => 'sly', 'Solyc05g007430.4' => 'sly', 'Solyc07g063150.3' => 'sly', 'Solyc08g016620.3' => 'sly', 'Solyc09g057590.3' => 'sly', 'Solyc09g057600.1' => 'sly', 'Solyc10g009050.3' => 'sly', 'Solyc11g017420.2' => 'sly', 'Sopen01g053810' => 'spe', 'Sopen02g023040' => 'spe', 'Sopen03g002440' => 'spe', 'Sopen04g033350' => 'spe', 'Sopen05g003310' => 'spe', 'Sopen07g004050' => 'spe', 'Sopen07g031340' => 'spe', 'Sopen08g006990' => 'spe', 'Sopen10g004830' => 'spe', 'Sopen11g009370' => 'spe', 'Sp1g24450' => 'spa', 'Sp1g29670' => 'spa', 'Sp1g39600' => 'spa', 'Sp2g11080' => 'spa', 'Sp2g13970' => 'spa', 'Sp4g16130' => 'spa', 'Sp6g13080' => 'spa', 'Sp7g37270' => 'spa', 'TAR371G0065' => 'tar', 'TAR376G0340' => 'tar', 'TAR376G0435' => 'tar', 'TAR381G0002' => 'tar', 'TAR381G1236' => 'tar', 'TAR624G0055' => 'tar', 'TAR624G0324' => 'tar', 'TAR624G0696' => 'tar', 'TAR624G0906' => 'tar', 'TAR625G0107' => 'tar', 'TAR626G0015' => 'tar', 'TAR626G1356' => 'tar', 'TAR627G0888' => 'tar', 'TAR628G0399' => 'tar', 'TAR628G1327' => 'tar', 'TAR629G2831' => 'tar', 'TAR629G2874' => 'tar', 'TAR633G1432' => 'tar', 'TAR633G2771' => 'tar', 'THA.LOC104803394' => 'tha', 'THA.LOC104805153' => 'tha', 'THA.LOC104806784' => 'tha', 'THA.LOC104810473' => 'tha', 'THA.LOC104813100' => 'tha', 'THA.LOC104814215' => 'tha', 'THA.LOC104815554' => 'tha', 'THA.LOC104820544' => 'tha', 'THA.LOC104824754' => 'tha', 'THA.LOC104827717' => 'tha', 'Thecc.02G031400' => 'tca', 'Thecc.02G055900' => 'tca', 'Thecc.02G350800' => 'tca', 'Thecc.06G150900' => 'tca', 'Thecc.06G186600' => 'tca', 'Thecc.07G089600' => 'tca', 'Thecc.08G020400' => 'tca', 'Thecc.08G182100' => 'tca', 'Thhalv10000873m.g' => 'esa', 'Thhalv10004185m.g' => 'esa', 'Thhalv10006981m.g' => 'esa', 'Thhalv10007204m.g' => 'esa', 'Thhalv10011374m.g' => 'esa', 'Thhalv10013482m.g' => 'esa', 'Thhalv10017801m.g' => 'esa', 'Thhalv10024983m.g' => 'esa', 'TPR.G12072' => 'tpr', 'TPR.G15769' => 'tpr', 'TPR.G16504' => 'tpr', 'TPR.G16506' => 'tpr', 'TPR.G24345' => 'tpr', 'TPR.G26666' => 'tpr', 'TPR.G27320' => 'tpr', 'TPR.G31819' => 'tpr', 'TPR.G38879' => 'tpr', 'TPR.G39015' => 'tpr', 'TPR.G8819' => 'tpr', 'TWI09G0924' => 'twi', 'TWI12G0811' => 'twi', 'TWI12G1294' => 'twi', 'TWI31G0150' => 'twi', 'TWI36G1262' => 'twi', 'TWI38G1287' => 'twi', 'TWI38G1633' => 'twi', 'TWI38G1982' => 'twi', 'TWI39G0116' => 'twi', 'TWI60G1011' => 'twi', 'TWI63G0171' => 'twi', 'TWI73G0839' => 'twi', 'TWI79G1511' => 'twi', 'unitig_0.g915' => 'ugi', 'unitig_0.g916' => 'ugi', 'unitig_21.g20219' => 'ugi', 'unitig_21.g20416' => 'ugi', 'unitig_578.g16132' => 'ugi', 'unitig_578.g16718' => 'ugi', 'unitig_62.g23481' => 'ugi', 'unitig_744.g24535' => 'ugi', 'unitig_749.g13525' => 'ugi', 'vmacro01248' => 'vma', 'vmacro02290' => 'vma', 'vmacro10946' => 'vma', 'vmacro11865' => 'vma', 'vmacro12493' => 'vma', 'vmacro17322' => 'vma', 'vmacro21599' => 'vma', 'vmacro23041' => 'vma', 'VMungo0251G0004' => 'vmu', 'VMungo0251G2639' => 'vmu', 'VMungo0251G2967' => 'vmu', 'VMungo0540G0864' => 'vmu', 'VMungo0540G1569' => 'vmu', 'VMungo0647G0317' => 'vmu', 'VMungo0720G1373' => 'vmu', 'VMungo0720G1508' => 'vmu', 'VMungo1080G0485' => 'vmu', 'VMungo1215G3177' => 'vmu', 'Zm00001eb112600' => 'zma', 'Zm00001eb120220' => 'zma', 'Zm00001eb153240' => 'zma', 'Zm00001eb168880' => 'zma', 'Zm00001eb213920' => 'zma', 'Zm00001eb228280' => 'zma', 'Zm00001eb254580' => 'zma', 'Zm00001eb272180' => 'zma', 'Zm00001eb293190' => 'zma', 'Zm00001eb322930' => 'zma', 'Zm00001eb353360' => 'zma', 'Zm00001eb353390' => 'zma', 'Zm00001eb353430' => 'zma', 'Zm00001eb353440' => 'zma', 'Zm00001eb353780' => 'zma' ) $gf_id = 'HOM05D000499' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000499' ) $data_identifier = 'HOM05D000499' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 29, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 12, 'amhyb' => (int) 8, 'aly' => (int) 12, 'aox' => (int) 9, 'arhy' => (int) 26, 'ath' => (int) 8, 'atr' => (int) 7, 'acertr' => (int) 10, 'cqu' => (int) 15, 'bca' => (int) 29, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 11, 'cansat' => (int) 8, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 9, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 8, 'cpa' => (int) 10, 'csa' => (int) 7, 'camsi' => (int) 20, 'dca' => (int) 8, 'din' => (int) 12, 'dzi' => (int) 14, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 6, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 38, 'gra' => (int) 16, 'vvi' => (int) 8, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 5, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 11, 'lja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 11, 'mpo' => (int) 3, 'mbi' => (int) 14, 'mdo' => (int) 14, 'mtr' => (int) 8, 'cme' => (int) 9, 'egut' => (int) 9, 'ama' => (int) 11, 'nta' => (int) 17, 'nnu' => (int) 11, 'oeu' => (int) 18, 'osa' => (int) 8, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 6, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 9, 'rsi' => (int) 9, 'sbr' => (int) 10, 'sbo' => (int) 8, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 10, 'sas' => (int) 10, 'shi' => (int) 6, 'smo' => (int) 7, 'sly' => (int) 14, 'spe' => (int) 10, 'spa' => (int) 8, 'tar' => (int) 19, 'tha' => (int) 10, 'tca' => (int) 8, 'esa' => (int) 8, 'tpr' => (int) 11, 'twi' => (int) 13, 'ugi' => (int) 9, 'vma' => (int) 8, 'vmu' => (int) 10, 'zma' => (int) 15 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb353780' $species_info = array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ) $local_species = 'spe' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000499', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1066', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p29780' => 'bna', 'A02p33180' => 'bna', 'A03p16470' => 'bna', 'A03p66010' => 'bna', 'A04p25970' => 'bna', 'A06p01270' => 'bna', 'A06p46080' => 'bna', 'A07p11400' => 'bna', 'A08p01840' => 'bna', 'A08p08230' => 'bna', 'A08p25740' => 'bna', 'A09p32070' => 'bna', 'A09p37830' => 'bna', 'A09p42840' => 'bna', 'A09p42850' => 'bna', 'Aa31LG10G2060' => 'aar', 'Aa31LG2G7410' => 'aar', 'Aa31LG6G10200' => 'aar', 'Aa31LG6G16680' => 'aar', 'Aa31LG6G8470' => 'aar', 'Aa31LG9G12730' => 'aar', 'Aa31LG9G13680' => 'aar', 'Aa31LG9G14920' => 'aar', 'Aa31LG9G6650' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4977' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5467' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3254' => 'aag', 'Actinidia02578' => 'ach', 'Actinidia07693' => 'ach', 'Actinidia08413' => 'ach', 'Actinidia08414' => 'ach', 'Actinidia15289' => 'ach', 'Actinidia19871' => 'ach', 'Actinidia21475' => 'ach', 'Actinidia22576' => 'ach', 'Actinidia28327' => 'ach', 'Actinidia32491' => 'ach', 'Actinidia39463' => 'ach', 'Actinidia39571' => 'ach', 'Ah.01g013750' => 'amhyb', 'Ah.01g023210' => 'amhyb', 'Ah.04g164850' => 'amhyb', 'Ah.05g178060' => 'amhyb', 'Ah.07g204270' => 'amhyb', 'Ah.07g208480' => 'amhyb', 'Ah.09g237410' => 'amhyb', 'Ah.14g089460' => 'amhyb', 'AL1G41790' => 'aly', 'AL1G49050' => 'aly', 'AL1G53810' => 'aly', 'AL1G61400' => 'aly', 'AL4G18580' => 'aly', 'AL5G12510' => 'aly', 'AL5G12540' => 'aly', 'AL6G43230' => 'aly', 'AL7G10370' => 'aly', 'AL7G19250' => 'aly', 'AL8G12240' => 'aly', 'AL8G18540' => 'aly', 'Aqoxy1G02409' => 'aox', 'Aqoxy2G03993' => 'aox', 'Aqoxy3G03357' => 'aox', 'Aqoxy4G00785' => 'aox', 'Aqoxy5G02598' => 'aox', 'Aqoxy6G00132' => 'aox', 'Aqoxy7G01776' => 'aox', 'Aqoxy7G02316' => 'aox', 'Aqoxy7G03973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.12AFKW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B8730' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27IQR1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3F75VG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3RE0GA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41TCQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.527VTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FIR39' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5W8UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DA38EV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ63HS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H1I32C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HC27T5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4M8AP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7N3CZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9UVDZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LS1NQA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT1D4B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SKC4TM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCFV76' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF9Q1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQWD9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1ZM88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WE07RT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YCK7VH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJE6Q6' => 'arhy', 'AT1G28240' => 'ath', 'AT1G34550' => 'ath', 'AT1G53040' => 'ath', 'AT2G02910' => 'ath', 'AT4G09630' => 'ath', 'AT4G38500' => 'ath', 'AT5G42660' => 'ath', 'AT5G46220' => 'ath', 'ATR0152G026' => 'atr', 'ATR0564G343' => 'atr', 'ATR0706G151' => 'atr', 'ATR0733G207' => 'atr', 'ATR0751G234' => 'atr', 'ATR0807G048' => 'atr', 'ATR1091G084' => 'atr', 'Atru.chr10.1229' => 'acertr', 'Atru.chr10.1230' => 'acertr', 'Atru.chr10.1874' => 'acertr', 'Atru.chr11.1808' => 'acertr', 'Atru.chr13.1795' => 'acertr', 'Atru.chr13.570' => 'acertr', 'Atru.chr2.2608' => 'acertr', 'Atru.chr2.2609' => 'acertr', 'Atru.chr5.3428' => 'acertr', 'Atru.chr8.1171' => 'acertr', 'AUR62004651' => 'cqu', 'AUR62008675' => 'cqu', 'AUR62010014' => 'cqu', 'AUR62013004' => 'cqu', 'AUR62014825' => 'cqu', 'AUR62015015' => 'cqu', 'AUR62015151' => 'cqu', 'AUR62017020' => 'cqu', 'AUR62019422' => 'cqu', 'AUR62023570' => 'cqu', 'AUR62025571' => 'cqu', 'AUR62029098' => 'cqu', 'AUR62033863' => 'cqu', 'AUR62034296' => 'cqu', 'AUR62040075' => 'cqu', 'BcaB02g07334' => 'bca', 'BcaB02g10575' => 'bca', 'BcaB03g12119' => 'bca', 'BcaB03g12120' => 'bca', 'BcaB03g13945' => 'bca', 'BcaB04g17123' => 'bca', 'BcaB04g17867' => 'bca', 'BcaB04g19839' => 'bca', 'BcaB07g30317' => 'bca', 'BcaB07g32432' => 'bca', 'BcaB07g33362' => 'bca', 'BcaB08g36611' => 'bca', 'BcaC01g00028' => 'bca', 'BcaC01g01356' => 'bca', 'BcaC01g02034' => 'bca', 'BcaC01g06051' => 'bca', 'BcaC03g16839' => 'bca', 'BcaC03g17176' => 'bca', 'BcaC05g26829' => 'bca', 'BcaC06g31490' => 'bca', 'BcaC06g35344' => 'bca', 'BcaC06g36570' => 'bca', 'BcaC07g37537' => 'bca', 'BcaC08g43491' => 'bca', 'BcaC08g43773' => 'bca', 'BcaNung00234' => 'bca', 'BcaNung01982' => 'bca', 'BcaNung03707' => 'bca', 'BcaNung06454' => 'bca', 'BolC2t10762H' => 'bol', 'BolC2t11191H' => 'bol', 'BolC3t14322H' => 'bol', 'BolC3t19747H' => 'bol', 'BolC3t21425H' => 'bol', 'BolC4t27800H' => 'bol', 'BolC5t31423H' => 'bol', 'BolC6t35951H' => 'bol', 'BolC6t36282H' => 'bol', 'BolC7t40678H' => 'bol', 'BolC7t40679H' => 'bol', 'BolC7t42222H' => 'bol', 'BolC7t43492H' => 'bol', 'BolC7t46785H' => 'bol', 'BolC8t47853H' => 'bol', 'BolC9t56805H' => 'bol', 'BraA02t08000Z' => 'bra', 'BraA02t08341Z' => 'bra', 'BraA03t10936Z' => 'bra', 'BraA03t15657Z' => 'bra', 'BraA04t18100Z' => 'bra', 'BraA05t20523Z' => 'bra', 'BraA06t23353Z' => 'bra', 'BraA06t27473Z' => 'bra', 'BraA06t27769Z' => 'bra', 'BraA07t28928Z' => 'bra', 'BraA08t32236Z' => 'bra', 'BraA08t32841Z' => 'bra', 'BraA08t34524Z' => 'bra', 'BraA09t38742Z' => 'bra', 'BraA09t39295Z' => 'bra', 'C02p47180' => 'bna', 'C02p50990' => 'bna', 'C03p19360' => 'bna', 'C03p74950' => 'bna', 'C03p91000' => 'bna', 'C04p63260' => 'bna', 'C05p27050' => 'bna', 'C06p08750' => 'bna', 'C06p11490' => 'bna', 'C07p02820' => 'bna', 'C07p17180' => 'bna', 'C07p29440' => 'bna', 'C07p63730' => 'bna', 'C09p39260' => 'bna', 'CAN.G1164.34' => 'can', 'CAN.G1164.39' => 'can', 'CAN.G1530.3' => 'can', 'CAN.G162.61' => 'can', 'CAN.G176.6' => 'can', 'CAN.G289.49' => 'can', 'CAN.G370.21' => 'can', 'CAN.G370.22' => 'can', 'CAN.G371.117' => 'can', 'CAN.G58.37' => 'can', 'CAN.G588.98' => 'can', 'CANSAT21G2266' => 'cansat', 'CANSAT25G2799' => 'cansat', 'CANSAT35G0862' => 'cansat', 'CANSAT35G1704' => 'cansat', 'CANSAT35G1760' => 'cansat', 'CANSAT56G3971' => 'cansat', 'CANSAT56G4116' => 'cansat', 'CANSAT80G1259' => 'cansat', 'CARHR027730' => 'chi', 'CARHR033880' => 'chi', 'CARHR043270' => 'chi', 'CARHR145330' => 'chi', 'CARHR145340' => 'chi', 'CARHR175570' => 'chi', 'CARHR181570' => 'chi', 'CARHR258470' => 'chi', 'CARHR260490' => 'chi', 'CARHR294220' => 'chi', 'Carub.0001s2668' => 'cru', 'Carub.0001s3257' => 'cru', 'Carub.0001s4220' => 'cru', 'Carub.0005s0179' => 'cru', 'Carub.0006s2807' => 'cru', 'Carub.0007s0039' => 'cru', 'Carub.0008s0169' => 'cru', 'Carub.0008s0636' => 'cru', 'Ca_00338_v3' => 'car', 'Ca_00542_v3' => 'car', 'Ca_01844_v3' => 'car', 'Ca_10611_v3' => 'car', 'Ca_13326_v3' => 'car', 'Ca_17944_v3' => 'car', 'Ca_18546_v3' => 'car', 'Ca_24219_v3' => 'car', 'Ca_29972_v3' => 'car', 'CBR_g3681' => 'cbr', 'CBR_g40021' => 'cbr', 'Cc01_g08140' => 'ccan', 'Cc02_g13410' => 'ccan', 'Cc02_g37480' => 'ccan', 'Cc05_g12030' => 'ccan', 'Cc09_g03370' => 'ccan', 'Cc09_g10300' => 'ccan', 'Cc10_g03530' => 'ccan', 'Cc10_g11380' => 'ccan', 'CDE01G0176' => 'cde', 'CDE02G0675' => 'cde', 'CDE02G0942' => 'cde', 'CDE02G1153' => 'cde', 'CDE02G4177' => 'cde', 'CDE04G2117' => 'cde', 'CDE04G2736' => 'cde', 'CDE08G1161' => 'cde', 'CDE09G1238' => 'cde', 'Cfa000467' => 'cfa', 'Cfa000947' => 'cfa', 'Cfa004969' => 'cfa', 'Cfa005284' => 'cfa', 'Cfa008993' => 'cfa', 'Cfa018187' => 'cfa', 'Cfa018454' => 'cfa', 'Cfa020585' => 'cfa', 'Ciclev10000424m.g' => 'ccl', 'Ciclev10003605m.g' => 'ccl', 'Ciclev10007828m.g' => 'ccl', 'Ciclev10014620m.g' => 'ccl', 'Ciclev10015169m.g' => 'ccl', 'Ciclev10018291m.g' => 'ccl', 'Ciclev10028256m.g' => 'ccl', 'Ciclev10033822m.g' => 'ccl', 'CiPaw.05G060300' => 'cil', 'CiPaw.05G085000' => 'cil', 'CiPaw.06G083700' => 'cil', 'CiPaw.06G120300' => 'cil', 'CiPaw.09G060500' => 'cil', 'CiPaw.09G123800' => 'cil', 'CiPaw.11G169700' => 'cil', 'CiPaw.12G118300' => 'cil', 'CiPaw.15G071000' => 'cil', 'CiPaw.15G081900' => 'cil', 'ClCG01G024610' => 'cla', 'ClCG03G006070' => 'cla', 'ClCG05G019250' => 'cla', 'ClCG09G009500' => 'cla', 'ClCG11G008200' => 'cla', 'ClCG11G018080' => 'cla', 'COL.COLO4_17373' => 'col', 'COL.COLO4_22994' => 'col', 'COL.COLO4_26389' => 'col', 'COL.COLO4_27170' => 'col', 'COL.COLO4_31074' => 'col', 'COL.COLO4_31465' => 'col', 'COL.COLO4_36438' => 'col', 'COL.COLO4_36439' => 'col', 'Cpa.g.c38781' => 'cpa', 'Cpa.g.sc128.12' => 'cpa', 'Cpa.g.sc166.7' => 'cpa', 'Cpa.g.sc166.8' => 'cpa', 'Cpa.g.sc20.111' => 'cpa', 'Cpa.g.sc27.31' => 'cpa', 'Cpa.g.sc64.36' => 'cpa', 'Cpa.g.sc64.37' => 'cpa', 'Cpa.g.sc66.49' => 'cpa', 'Cpa.g.sc80.64' => 'cpa', 'CsaV3_1G012320' => 'csa', 'CsaV3_2G008480' => 'csa', 'CsaV3_2G033450' => 'csa', 'CsaV3_3G044830' => 'csa', 'CsaV3_4G033710' => 'csa', 'CsaV3_6G051730' => 'csa', 'CsaV3_7G025350' => 'csa', 'CSS0001067' => 'camsi', 'CSS0005996' => 'camsi', 'CSS0006590' => 'camsi', 'CSS0009673' => 'camsi', 'CSS0010201' => 'camsi', 'CSS0010549' => 'camsi', 'CSS0011364' => 'camsi', 'CSS0014473' => 'camsi', 'CSS0014961' => 'camsi', 'CSS0020191' => 'camsi', 'CSS0021165' => 'camsi', 'CSS0022306' => 'camsi', 'CSS0030591' => 'camsi', 'CSS0030696' => 'camsi', 'CSS0032653' => 'camsi', 'CSS0037487' => 'camsi', 'CSS0041102' => 'camsi', 'CSS0041261' => 'camsi', 'CSS0046246' => 'camsi', 'CSS0049256' => 'camsi', 'DCAR_004075' => 'dca', 'DCAR_011538' => 'dca', 'DCAR_019553' => 'dca', 'DCAR_020952' => 'dca', 'DCAR_021739' => 'dca', 'DCAR_027407' => 'dca', 'DCAR_027913' => 'dca', 'DCAR_028066' => 'dca', 'Dinv05899' => 'din', 'Dinv07563' => 'din', 'Dinv08010' => 'din', 'Dinv14125' => 'din', 'Dinv20172' => 'din', 'Dinv30743' => 'din', 'Dinv31229' => 'din', 'Dinv34162' => 'din', 'Dinv36028' => 'din', 'Dinv39368' => 'din', 'Dinv40565' => 'din', 'Dinv41706' => 'din', 'Duzib052G0089' => 'dzi', 'Duzib116G0641' => 'dzi', 'Duzib132G0069' => 'dzi', 'Duzib132G1219' => 'dzi', 'Duzib147G0278' => 'dzi', 'Duzib160G0480' => 'dzi', 'Duzib170G0661' => 'dzi', 'Duzib177G0591' => 'dzi', 'Duzib187G1353' => 'dzi', 'Duzib192G0858' => 'dzi', 'Duzib192G0883' => 'dzi', 'Duzib213G0506' => 'dzi', 'Duzib235G0289' => 'dzi', 'Duzib251G0422' => 'dzi', 'ECA232G3898' => 'eca', 'ECA233G5950' => 'eca', 'ECA234G1699' => 'eca', 'ECA234G2421' => 'eca', 'ECA236G0426' => 'eca', 'ECA236G4331' => 'eca', 'ECA248G2573' => 'eca', 'EL10Ac1g00077' => 'bvu', 'EL10Ac1g01746' => 'bvu', 'EL10Ac2g03464' => 'bvu', 'EL10Ac4g08176' => 'bvu', 'EL10Ac7g17521' => 'bvu', 'EL10Ac8g20386' => 'bvu', 'EL10Ac9g21343' => 'bvu', 'EL10Ac9g22688' => 'bvu', 'Eucgr.B03434' => 'egr', 'Eucgr.D00618' => 'egr', 'Eucgr.E02395' => 'egr', 'Eucgr.F01129' => 'egr', 'Eucgr.F02622' => 'egr', 'Eucgr.F04207' => 'egr', 'FAN01G0570' => 'fan', 'FAN03G3351' => 'fan', 'FAN06G3702' => 'fan', 'FAN07G2149' => 'fan', 'FAN10G3758' => 'fan', 'FAN11G1170' => 'fan', 'FAN11G2050' => 'fan', 'FAN11G2724' => 'fan', 'FAN12G1700' => 'fan', 'FAN12G2028' => 'fan', 'FAN15G1160' => 'fan', 'FAN15G3063' => 'fan', 'FAN16G2540' => 'fan', 'FAN16G3077' => 'fan', 'FAN16G3624' => 'fan', 'FAN17G0221' => 'fan', 'FAN20G2492' => 'fan', 'FAN20G2905' => 'fan', 'FAN21G0548' => 'fan', 'FAN21G1300' => 'fan', 'FAN22G0077' => 'fan', 'FAN22G1315' => 'fan', 'FAN24G1280' => 'fan', 'FAN24G1445' => 'fan', 'FAN24G3527' => 'fan', 'FAN25G0464' => 'fan', 'FAN25G2885' => 'fan', 'FAN25G3270' => 'fan', 'FAN27G1101' => 'fan', 'FAN27G2846' => 'fan', 'FAN27G3524' => 'fan', 'FvH4_2g11770' => 'fve', 'FvH4_2g15630' => 'fve', 'FvH4_3g05570' => 'fve', 'FvH4_3g09110' => 'fve', 'FvH4_3g19940' => 'fve', 'FvH4_4g04821' => 'fve', 'FvH4_4g31480' => 'fve', 'FvH4_7g01740' => 'fve', 'Glyma.05G130400' => 'gma', 'Glyma.05G156400' => 'gma', 'Glyma.07G197000' => 'gma', 'Glyma.08G085151' => 'gma', 'Glyma.08G114500' => 'gma', 'Glyma.08G300400' => 'gma', 'Glyma.10G215800' => 'gma', 'Glyma.12G224400' => 'gma', 'Glyma.13G179300' => 'gma', 'Glyma.13G218151' => 'gma', 'Glyma.13G238800' => 'gma', 'Glyma.13G276900' => 'gma', 'Glyma.14G078200' => 'gma', 'Glyma.15G074500' => 'gma', 'Glyma.15G094100' => 'gma', 'Glyma.17G247200' => 'gma', 'Glyma.18G120100' => 'gma', 'Glyma.20G176000' => 'gma', 'Gohir.A01G063600' => 'ghi', 'Gohir.A01G170301' => 'ghi', 'Gohir.A02G060500' => 'ghi', 'Gohir.A05G133850' => 'ghi', 'Gohir.A05G161400' => 'ghi', 'Gohir.A06G012900' => 'ghi', 'Gohir.A06G035901' => 'ghi', 'Gohir.A06G127100' => 'ghi', 'Gohir.A06G210500' => 'ghi', 'Gohir.A08G008650' => 'ghi', 'Gohir.A09G072700' => 'ghi', 'Gohir.A09G088301' => 'ghi', 'Gohir.A10G040600' => 'ghi', 'Gohir.A12G036300' => 'ghi', 'Gohir.A12G143350' => 'ghi', 'Gohir.A12G165500' => 'ghi', 'Gohir.A13G145700' => 'ghi', 'Gohir.D01G050000' => 'ghi', 'Gohir.D01G051366' => 'ghi', 'Gohir.D01G161350' => 'ghi', 'Gohir.D02G065900' => 'ghi', 'Gohir.D05G164200' => 'ghi', 'Gohir.D05G355500' => 'ghi', 'Gohir.D06G010400' => 'ghi', 'Gohir.D06G111250' => 'ghi', 'Gohir.D06G132000' => 'ghi', 'Gohir.D06G210500' => 'ghi', 'Gohir.D07G165675' => 'ghi', 'Gohir.D08G062240' => 'ghi', 'Gohir.D08G086101' => 'ghi', 'Gohir.D08G138060' => 'ghi', 'Gohir.D09G072300' => 'ghi', 'Gohir.D10G041400' => 'ghi', 'Gohir.D11G191020' => 'ghi', 'Gohir.D11G212066' => 'ghi', 'Gohir.D12G036300' => 'ghi', 'Gohir.D12G168600' => 'ghi', 'Gohir.D13G150600' => 'ghi', 'Gorai.001G057300' => 'gra', 'Gorai.002G069900' => 'gra', 'Gorai.002G200000' => 'gra', 'Gorai.003G067600' => 'gra', 'Gorai.005G074800' => 'gra', 'Gorai.006G087300' => 'gra', 'Gorai.008G037500' => 'gra', 'Gorai.008G181400' => 'gra', 'Gorai.009G169400' => 'gra', 'Gorai.009G387900' => 'gra', 'Gorai.010G013300' => 'gra', 'Gorai.010G153800' => 'gra', 'Gorai.010G255800' => 'gra', 'Gorai.011G043700' => 'gra', 'Gorai.011G198900' => 'gra', 'Gorai.013G168400' => 'gra', 'GSVIVG01005212001' => 'vvi', 'GSVIVG01006163001' => 'vvi', 'GSVIVG01009625001' => 'vvi', 'GSVIVG01014338001' => 'vvi', 'GSVIVG01020005001' => 'vvi', 'GSVIVG01021450001' => 'vvi', 'GSVIVG01023975001' => 'vvi', 'GSVIVG01034490001' => 'vvi', 'HanXRQChr04g0112071' => 'han', 'HanXRQChr05g0131151' => 'han', 'HanXRQChr09g0262371' => 'han', 'HanXRQChr09g0268401' => 'han', 'HanXRQChr10g0279241' => 'han', 'HanXRQChr10g0297961' => 'han', 'HanXRQChr11g0326231' => 'han', 'HanXRQChr11g0328471' => 'han', 'HanXRQChr16g0507941' => 'han', 'HanXRQChr17g0560211' => 'han', 'Haze_02108' => 'cav', 'Haze_02428' => 'cav', 'Haze_05593' => 'cav', 'Haze_06448' => 'cav', 'Haze_09427' => 'cav', 'Haze_12022' => 'cav', 'Haze_17612' => 'cav', 'Haze_17928' => 'cav', 'Hma1.2p1_0032F.1_g019250' => 'hma', 'Hma1.2p1_0163F.1_g072690' => 'hma', 'Hma1.2p1_0265F.1_g106710' => 'hma', 'Hma1.2p1_0286F.1_g113970' => 'hma', 'Hma1.2p1_0363F.1_g136640' => 'hma', 'Hma1.2p1_0584F.1_g183470' => 'hma', 'Hma1.2p1_0885F.1_g232570' => 'hma', 'HPP92_006022' => 'vpl', 'HPP92_007320' => 'vpl', 'HPP92_011521' => 'vpl', 'HPP92_019387' => 'vpl', 'HPP92_024038' => 'vpl', 'Hund05891' => 'sun', 'Hund06450' => 'sun', 'Hund12053' => 'sun', 'Hund16800' => 'sun', 'Hund21222' => 'sun', 'Hund22896' => 'sun', 'Hund23746' => 'sun', 'Hund27083' => 'sun', 'Lalb_Chr02g0141831' => 'lal', 'Lalb_Chr02g0141841' => 'lal', 'Lalb_Chr05g0220411' => 'lal', 'Lalb_Chr06g0162081' => 'lal', 'Lalb_Chr09g0327651' => 'lal', 'Lalb_Chr13g0295051' => 'lal', 'Lalb_Chr15g0086801' => 'lal', 'Lalb_Chr16g0383781' => 'lal', 'Lalb_Chr16g0383791' => 'lal', 'Lalb_Chr18g0055441' => 'lal', 'Lalb_Chr18g0059611' => 'lal', 'Lalb_Chr20g0109661' => 'lal', 'Lalb_Chr20g0109831' => 'lal', 'Lalb_Chr20g0121871' => 'lal', 'Lalb_Chr22g0355361' => 'lal', 'Lalb_Chr25g0286371' => 'lal', 'Lj1A1187G43' => 'lonja', 'Lj1A1205T50' => 'lonja', 'Lj1A800G33' => 'lonja', 'Lj1C1187T7' => 'lonja', 'Lj1C843T11' => 'lonja', 'Lj1g0010940' => 'lja', 'Lj2A288T69' => 'lonja', 'Lj3g0024276' => 'lja', 'Lj4A47T76' => 'lonja', 'Lj4g0005805' => 'lja', 'Lj4g0006097' => 'lja', 'Lj4g0008528' => 'lja', 'Lj4g0024907' => 'lja', 'Lj5g0012472' => 'lja', 'Lj5g0018648' => 'lja', 'Lj6C789G1' => 'lonja', 'Lj6g0004000' => 'lja', 'Lj7A292G67' => 'lonja', 'Lj7A292T64' => 'lonja', 'Lj9A400T58' => 'lonja', 'Lsat_1_v5_gn_1_126181' => 'lsa', 'Lsat_1_v5_gn_4_123041' => 'lsa', 'Lsat_1_v5_gn_4_133620' => 'lsa', 'Lsat_1_v5_gn_4_53221' => 'lsa', 'Lsat_1_v5_gn_4_71961' => 'lsa', 'Lsat_1_v5_gn_7_105241' => 'lsa', 'Lsat_1_v5_gn_7_21361' => 'lsa', 'Lsat_1_v5_gn_7_28860' => 'lsa', 'Lsat_1_v5_gn_7_31260' => 'lsa', 'Lsat_1_v5_gn_8_52801' => 'lsa', 'Manes.02G191400' => 'mes', 'Manes.03G110100' => 'mes', 'Manes.04G071100' => 'mes', 'Manes.05G100500' => 'mes', 'Manes.05G164700' => 'mes', 'Manes.15G087000' => 'mes', 'Manes.15G121500' => 'mes', 'Manes.16G028300' => 'mes', 'Manes.17G046100' => 'mes', 'Manes.17G069800' => 'mes', 'Manes.18G100500' => 'mes', 'Mapoly0002s0109' => 'mpo', 'Mapoly0024s0007' => 'mpo', 'Mapoly0089s0032' => 'mpo', 'MBI04_g42241_MAGBIO' => 'mbi', 'MBI05_g11988_MAGBIO' => 'mbi', 'MBI05_g35452_MAGBIO' => 'mbi', 'MBI07_g30179_MAGBIO' => 'mbi', 'MBI07_g35859_MAGBIO' => 'mbi', 'MBI07_g35860_MAGBIO' => 'mbi', 'MBI07_g37166_MAGBIO' => 'mbi', 'MBI08_g18172_MAGBIO' => 'mbi', 'MBI09_g08441_MAGBIO' => 'mbi', 'MBI13_g01676_MAGBIO' => 'mbi', 'MBI14_g42955_MAGBIO' => 'mbi', 'MBI16_g13161_MAGBIO' => 'mbi', 'MBI17_g27204_MAGBIO' => 'mbi', 'MBI19_g21595_MAGBIO' => 'mbi', 'MD00G1148400' => 'mdo', 'MD02G1301200' => 'mdo', 'MD03G1227800' => 'mdo', 'MD05G1041100' => 'mdo', 'MD05G1124800' => 'mdo', 'MD05G1284000' => 'mdo', 'MD05G1338800' => 'mdo', 'MD05G1338900' => 'mdo', 'MD07G1022800' => 'mdo', 'MD10G1047500' => 'mdo', 'MD10G1127500' => 'mdo', 'MD10G1262300' => 'mdo', 'MD10G1293800' => 'mdo', 'MD16G1074300' => 'mdo', 'Medtr1g021670' => 'mtr', 'Medtr1g096320' => 'mtr', 'Medtr2g013690' => 'mtr', 'Medtr2g019450' => 'mtr', 'Medtr2g085170' => 'mtr', 'Medtr4g088785' => 'mtr', 'Medtr8g055930' => 'mtr', 'Medtr8g085850' => 'mtr', 'MELO3C002605.2' => 'cme', 'MELO3C003891.2' => 'cme', 'MELO3C004012.2' => 'cme', 'MELO3C007134.2' => 'cme', 'MELO3C008118.2' => 'cme', 'MELO3C016700.2' => 'cme', 'MELO3C024127.2' => 'cme', 'MELO3C033361.2' => 'cme', 'MELO3C033362.2' => 'cme', 'Migut.C00430' => 'egut', 'Migut.C01246' => 'egut', 'Migut.E00101' => 'egut', 'Migut.H01486' => 'egut', 'Migut.H01939' => 'egut', 'Migut.K00360' => 'egut', 'Migut.M00910' => 'egut', 'Migut.M01139' => 'egut', 'Migut.N02677' => 'egut', 'MSTRG.13252' => 'ama', 'MSTRG.14701' => 'ama', 'MSTRG.1521' => 'ama', 'MSTRG.15884' => 'ama', 'MSTRG.16242' => 'ama', 'MSTRG.22285' => 'ama', 'MSTRG.22444' => 'ama', 'MSTRG.2349' => 'ama', 'MSTRG.26308' => 'ama', 'MSTRG.28296' => 'ama', 'MSTRG.9895' => 'ama', 'Nitab4.5_0000110g0060' => 'nta', 'Nitab4.5_0000420g0130' => 'nta', 'Nitab4.5_0000422g0030' => 'nta', 'Nitab4.5_0000560g0180' => 'nta', 'Nitab4.5_0000703g0100' => 'nta', 'Nitab4.5_0000786g0200' => 'nta', 'Nitab4.5_0001336g0020' => 'nta', 'Nitab4.5_0001796g0030' => 'nta', 'Nitab4.5_0003348g0060' => 'nta', 'Nitab4.5_0003698g0040' => 'nta', 'Nitab4.5_0003942g0090' => 'nta', 'Nitab4.5_0004775g0070' => 'nta', 'Nitab4.5_0004864g0030' => 'nta', 'Nitab4.5_0005615g0020' => 'nta', 'Nitab4.5_0009288g0030' => 'nta', 'Nitab4.5_0009341g0010' => 'nta', 'Nitab4.5_0009535g0010' => 'nta', 'Nn1g03995' => 'nnu', 'Nn1g04100' => 'nnu', 'Nn1g06530' => 'nnu', 'Nn3g16404' => 'nnu', 'Nn3g17212' => 'nnu', 'Nn3g20776' => 'nnu', 'Nn3g21923' => 'nnu', 'Nn5g27737' => 'nnu', 'Nn5g29461' => 'nnu', 'Nn7g38355' => 'nnu', 'Nn8g39873' => 'nnu', 'Oeu000548.2' => 'oeu', 'Oeu004672.1' => 'oeu', 'Oeu015605.2' => 'oeu', 'Oeu016092.1' => 'oeu', 'Oeu017879.3' => 'oeu', 'Oeu024910.1' => 'oeu', 'Oeu028965.1' => 'oeu', 'Oeu031269.1' => 'oeu', 'Oeu031270.1' => 'oeu', 'Oeu032535.1' => 'oeu', 'Oeu034151.1' => 'oeu', 'Oeu034152.1' => 'oeu', 'Oeu034588.2' => 'oeu', 'Oeu050846.1' => 'oeu', 'Oeu050849.2' => 'oeu', 'Oeu051063.2' => 'oeu', 'Oeu052368.1' => 'oeu', 'Oeu052370.1' => 'oeu', 'Os01g0210400' => 'osa', 'Os01g0304300' => 'osa', 'Os01g0749100' => 'osa', 'Os02g0745800' => 'osa', 'Os03g0769050' => 'osa', 'Os05g0531500' => 'osa', 'Os06g0724300' => 'osa', 'Os11g0198100' => 'osa', 'Peaxi162Scf00069g01425' => 'pax', 'Peaxi162Scf00280g00811' => 'pax', 'Peaxi162Scf00310g00615' => 'pax', 'Peaxi162Scf00362g00542' => 'pax', 'Peaxi162Scf00461g00310' => 'pax', 'Peaxi162Scf00530g00118' => 'pax', 'Peaxi162Scf00541g00057' => 'pax', 'Peaxi162Scf00661g00017' => 'pax', 'Peaxi162Scf00926g00027' => 'pax', 'Peaxi162Scf01064g00263' => 'pax', 'Peaxi162Scf01211g00135' => 'pax', 'PGR004G2336' => 'pgr', 'PGR042G0327' => 'pgr', 'PGR042G1957' => 'pgr', 'PGR042G2003' => 'pgr', 'PGR042G3929' => 'pgr', 'PGR083G1137' => 'pgr', 'PGR083G1364' => 'pgr', 'PGSC0003DMG400003381' => 'stu', 'PGSC0003DMG400003417' => 'stu', 'PGSC0003DMG400008981' => 'stu', 'PGSC0003DMG400012417' => 'stu', 'PGSC0003DMG400012823' => 'stu', 'PGSC0003DMG400016885' => 'stu', 'PGSC0003DMG400022812' => 'stu', 'PGSC0003DMG400029726' => 'stu', 'PGSC0003DMG401009243' => 'stu', 'PGSC0003DMG401031505' => 'stu', 'PGSC0003DMG402031505' => 'stu', 'Phvul.001G017600' => 'pvu', 'Phvul.002G193500' => 'pvu', 'Phvul.002G228900' => 'pvu', 'Phvul.002G236800' => 'pvu', 'Phvul.003G049500' => 'pvu', 'Phvul.005G072000' => 'pvu', 'Phvul.006G164800' => 'pvu', 'Phvul.006G185100' => 'pvu', 'Phvul.007G090000' => 'pvu', 'Potri.001G399800' => 'ptr', 'Potri.002G149900' => 'ptr', 'Potri.004G044100' => 'ptr', 'Potri.004G177600' => 'ptr', 'Potri.009G138000' => 'ptr', 'Potri.010G094000' => 'ptr', 'Potri.011G053000' => 'ptr', 'Potri.011G119300' => 'ptr', 'Potri.013G113700' => 'ptr', 'Potri.018G107800' => 'ptr', 'Potri.019G084100' => 'ptr', 'Pp3c14_23720' => 'ppa', 'Pp3c16_6340' => 'ppa', 'Pp3c23_13420' => 'ppa', 'Pp3c24_2740' => 'ppa', 'Pp3c25_860' => 'ppa', 'Pp3c8_21750' => 'ppa', 'Prupe.1G273000' => 'ppe', 'Prupe.1G273700' => 'ppe', 'Prupe.1G274100' => 'ppe', 'Prupe.2G023300' => 'ppe', 'Prupe.4G048000' => 'ppe', 'Prupe.4G080400' => 'ppe', 'Prupe.4G181200' => 'ppe', 'Prupe.8G056900' => 'ppe', 'Prupe.8G168700' => 'ppe', 'Psat1g189080' => 'psa', 'Psat1g204760' => 'psa', 'Psat4g175560' => 'psa', 'Psat4g177720' => 'psa', 'Psat5g244240' => 'psa', 'Psat6g010720' => 'psa', 'Psat6g187200' => 'psa', 'Psat7g072040' => 'psa', 'PSO017G3501' => 'pso', 'PSO063G2148' => 'pso', 'PSO063G5608' => 'pso', 'PSO210G6392' => 'pso', 'PSO541G2319' => 'pso', 'PSO541G2836' => 'pso', 'PSO541G4012' => 'pso', 'PSO541G6253' => 'pso', 'PSO675G0580' => 'pso', 'PSO675G0856' => 'pso', 'PSO675G5635' => 'pso', 'PSO675G9157' => 'pso', 'PSO832G1660' => 'pso', 'PSO832G1969' => 'pso', 'QL02p007186' => 'qlo', 'QL02p033904' => 'qlo', 'QL03p064391' => 'qlo', 'QL05p040593' => 'qlo', 'QL05p058242' => 'qlo', 'QL08p021825' => 'qlo', 'QL11p004981' => 'qlo', 'RcHm_v2.0_Chr1g0318301' => 'rch', 'RcHm_v2.0_Chr4g0418501' => 'rch', 'RcHm_v2.0_Chr4g0439971' => 'rch', 'RcHm_v2.0_Chr5g0008541' => 'rch', 'RcHm_v2.0_Chr5g0014101' => 'rch', 'RcHm_v2.0_Chr5g0014131' => 'rch', 'RcHm_v2.0_Chr5g0033621' => 'rch', 'RcHm_v2.0_Chr6g0272041' => 'rch', 'RcHm_v2.0_Chr6g0278831' => 'rch', 'Rhsim02G0130400' => 'rsi', 'Rhsim02G0171100' => 'rsi', 'Rhsim05G0053000' => 'rsi', 'Rhsim05G0053100' => 'rsi', 'Rhsim06G0096500' => 'rsi', 'Rhsim06G0096600' => 'rsi', 'Rhsim06G0199100' => 'rsi', 'Rhsim12G0062300' => 'rsi', 'Rhsim12G0062800' => 'rsi', 'Sabra02G0118600' => 'sbr', 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'Solyc03g079860.2' => 'sly', 'Solyc04g079770.3' => 'sly', 'Solyc05g007430.4' => 'sly', 'Solyc07g063150.3' => 'sly', 'Solyc08g016620.3' => 'sly', 'Solyc09g057590.3' => 'sly', 'Solyc09g057600.1' => 'sly', 'Solyc10g009050.3' => 'sly', 'Solyc11g017420.2' => 'sly', 'Sopen01g053810' => 'spe', 'Sopen02g023040' => 'spe', 'Sopen03g002440' => 'spe', 'Sopen04g033350' => 'spe', 'Sopen05g003310' => 'spe', 'Sopen07g004050' => 'spe', 'Sopen07g031340' => 'spe', 'Sopen08g006990' => 'spe', 'Sopen10g004830' => 'spe', 'Sopen11g009370' => 'spe', 'Sp1g24450' => 'spa', 'Sp1g29670' => 'spa', 'Sp1g39600' => 'spa', 'Sp2g11080' => 'spa', 'Sp2g13970' => 'spa', 'Sp4g16130' => 'spa', 'Sp6g13080' => 'spa', 'Sp7g37270' => 'spa', 'TAR371G0065' => 'tar', 'TAR376G0340' => 'tar', 'TAR376G0435' => 'tar', 'TAR381G0002' => 'tar', 'TAR381G1236' => 'tar', 'TAR624G0055' => 'tar', 'TAR624G0324' => 'tar', 'TAR624G0696' => 'tar', 'TAR624G0906' => 'tar', 'TAR625G0107' => 'tar', 'TAR626G0015' => 'tar', 'TAR626G1356' => 'tar', 'TAR627G0888' => 'tar', 'TAR628G0399' => 'tar', 'TAR628G1327' => 'tar', 'TAR629G2831' => 'tar', 'TAR629G2874' => 'tar', 'TAR633G1432' => 'tar', 'TAR633G2771' => 'tar', 'THA.LOC104803394' => 'tha', 'THA.LOC104805153' => 'tha', 'THA.LOC104806784' => 'tha', 'THA.LOC104810473' => 'tha', 'THA.LOC104813100' => 'tha', 'THA.LOC104814215' => 'tha', 'THA.LOC104815554' => 'tha', 'THA.LOC104820544' => 'tha', 'THA.LOC104824754' => 'tha', 'THA.LOC104827717' => 'tha', 'Thecc.02G031400' => 'tca', 'Thecc.02G055900' => 'tca', 'Thecc.02G350800' => 'tca', 'Thecc.06G150900' => 'tca', 'Thecc.06G186600' => 'tca', 'Thecc.07G089600' => 'tca', 'Thecc.08G020400' => 'tca', 'Thecc.08G182100' => 'tca', 'Thhalv10000873m.g' => 'esa', 'Thhalv10004185m.g' => 'esa', 'Thhalv10006981m.g' => 'esa', 'Thhalv10007204m.g' => 'esa', 'Thhalv10011374m.g' => 'esa', 'Thhalv10013482m.g' => 'esa', 'Thhalv10017801m.g' => 'esa', 'Thhalv10024983m.g' => 'esa', 'TPR.G12072' => 'tpr', 'TPR.G15769' => 'tpr', 'TPR.G16504' => 'tpr', 'TPR.G16506' => 'tpr', 'TPR.G24345' => 'tpr', 'TPR.G26666' => 'tpr', 'TPR.G27320' => 'tpr', 'TPR.G31819' => 'tpr', 'TPR.G38879' => 'tpr', 'TPR.G39015' => 'tpr', 'TPR.G8819' => 'tpr', 'TWI09G0924' => 'twi', 'TWI12G0811' => 'twi', 'TWI12G1294' => 'twi', 'TWI31G0150' => 'twi', 'TWI36G1262' => 'twi', 'TWI38G1287' => 'twi', 'TWI38G1633' => 'twi', 'TWI38G1982' => 'twi', 'TWI39G0116' => 'twi', 'TWI60G1011' => 'twi', 'TWI63G0171' => 'twi', 'TWI73G0839' => 'twi', 'TWI79G1511' => 'twi', 'unitig_0.g915' => 'ugi', 'unitig_0.g916' => 'ugi', 'unitig_21.g20219' => 'ugi', 'unitig_21.g20416' => 'ugi', 'unitig_578.g16132' => 'ugi', 'unitig_578.g16718' => 'ugi', 'unitig_62.g23481' => 'ugi', 'unitig_744.g24535' => 'ugi', 'unitig_749.g13525' => 'ugi', 'vmacro01248' => 'vma', 'vmacro02290' => 'vma', 'vmacro10946' => 'vma', 'vmacro11865' => 'vma', 'vmacro12493' => 'vma', 'vmacro17322' => 'vma', 'vmacro21599' => 'vma', 'vmacro23041' => 'vma', 'VMungo0251G0004' => 'vmu', 'VMungo0251G2639' => 'vmu', 'VMungo0251G2967' => 'vmu', 'VMungo0540G0864' => 'vmu', 'VMungo0540G1569' => 'vmu', 'VMungo0647G0317' => 'vmu', 'VMungo0720G1373' => 'vmu', 'VMungo0720G1508' => 'vmu', 'VMungo1080G0485' => 'vmu', 'VMungo1215G3177' => 'vmu', 'Zm00001eb112600' => 'zma', 'Zm00001eb120220' => 'zma', 'Zm00001eb153240' => 'zma', 'Zm00001eb168880' => 'zma', 'Zm00001eb213920' => 'zma', 'Zm00001eb228280' => 'zma', 'Zm00001eb254580' => 'zma', 'Zm00001eb272180' => 'zma', 'Zm00001eb293190' => 'zma', 'Zm00001eb322930' => 'zma', 'Zm00001eb353360' => 'zma', 'Zm00001eb353390' => 'zma', 'Zm00001eb353430' => 'zma', 'Zm00001eb353440' => 'zma', 'Zm00001eb353780' => 'zma' ), 'gf_id' => 'HOM05D000499', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000499' ), 'data_identifier' => 'HOM05D000499', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000499', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1066', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p29780' => 'bna', 'A02p33180' => 'bna', 'A03p16470' => 'bna', 'A03p66010' => 'bna', 'A04p25970' => 'bna', 'A06p01270' => 'bna', 'A06p46080' => 'bna', 'A07p11400' => 'bna', 'A08p01840' => 'bna', 'A08p08230' => 'bna', 'A08p25740' => 'bna', 'A09p32070' => 'bna', 'A09p37830' => 'bna', 'A09p42840' => 'bna', 'A09p42850' => 'bna', 'Aa31LG10G2060' => 'aar', 'Aa31LG2G7410' => 'aar', 'Aa31LG6G10200' => 'aar', 'Aa31LG6G16680' => 'aar', 'Aa31LG6G8470' => 'aar', 'Aa31LG9G12730' => 'aar', 'Aa31LG9G13680' => 'aar', 'Aa31LG9G14920' => 'aar', 'Aa31LG9G6650' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4977' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5467' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3254' => 'aag', 'Actinidia02578' => 'ach', 'Actinidia07693' => 'ach', 'Actinidia08413' => 'ach', 'Actinidia08414' => 'ach', 'Actinidia15289' => 'ach', 'Actinidia19871' => 'ach', 'Actinidia21475' => 'ach', 'Actinidia22576' => 'ach', 'Actinidia28327' => 'ach', 'Actinidia32491' => 'ach', 'Actinidia39463' => 'ach', 'Actinidia39571' => 'ach', 'Ah.01g013750' => 'amhyb', 'Ah.01g023210' => 'amhyb', 'Ah.04g164850' => 'amhyb', 'Ah.05g178060' => 'amhyb', 'Ah.07g204270' => 'amhyb', 'Ah.07g208480' => 'amhyb', 'Ah.09g237410' => 'amhyb', 'Ah.14g089460' => 'amhyb', 'AL1G41790' => 'aly', 'AL1G49050' => 'aly', 'AL1G53810' => 'aly', 'AL1G61400' => 'aly', 'AL4G18580' => 'aly', 'AL5G12510' => 'aly', 'AL5G12540' => 'aly', 'AL6G43230' => 'aly', 'AL7G10370' => 'aly', 'AL7G19250' => 'aly', 'AL8G12240' => 'aly', 'AL8G18540' => 'aly', 'Aqoxy1G02409' => 'aox', 'Aqoxy2G03993' => 'aox', 'Aqoxy3G03357' => 'aox', 'Aqoxy4G00785' => 'aox', 'Aqoxy5G02598' => 'aox', 'Aqoxy6G00132' => 'aox', 'Aqoxy7G01776' => 'aox', 'Aqoxy7G02316' => 'aox', 'Aqoxy7G03973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.12AFKW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B8730' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27IQR1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3F75VG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3RE0GA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41TCQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.527VTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FIR39' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5W8UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DA38EV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ63HS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H1I32C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HC27T5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4M8AP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7N3CZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9UVDZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LS1NQA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT1D4B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SKC4TM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCFV76' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF9Q1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQWD9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1ZM88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WE07RT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YCK7VH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJE6Q6' => 'arhy', 'AT1G28240' => 'ath', 'AT1G34550' => 'ath', 'AT1G53040' => 'ath', 'AT2G02910' => 'ath', 'AT4G09630' => 'ath', 'AT4G38500' => 'ath', 'AT5G42660' => 'ath', 'AT5G46220' => 'ath', 'ATR0152G026' => 'atr', 'ATR0564G343' => 'atr', 'ATR0706G151' => 'atr', 'ATR0733G207' => 'atr', 'ATR0751G234' => 'atr', 'ATR0807G048' => 'atr', 'ATR1091G084' => 'atr', 'Atru.chr10.1229' => 'acertr', 'Atru.chr10.1230' => 'acertr', 'Atru.chr10.1874' => 'acertr', 'Atru.chr11.1808' => 'acertr', 'Atru.chr13.1795' => 'acertr', 'Atru.chr13.570' => 'acertr', 'Atru.chr2.2608' => 'acertr', 'Atru.chr2.2609' => 'acertr', 'Atru.chr5.3428' => 'acertr', 'Atru.chr8.1171' => 'acertr', 'AUR62004651' => 'cqu', 'AUR62008675' => 'cqu', 'AUR62010014' => 'cqu', 'AUR62013004' => 'cqu', 'AUR62014825' => 'cqu', 'AUR62015015' => 'cqu', 'AUR62015151' => 'cqu', 'AUR62017020' => 'cqu', 'AUR62019422' => 'cqu', 'AUR62023570' => 'cqu', 'AUR62025571' => 'cqu', 'AUR62029098' => 'cqu', 'AUR62033863' => 'cqu', 'AUR62034296' => 'cqu', 'AUR62040075' => 'cqu', 'BcaB02g07334' => 'bca', 'BcaB02g10575' => 'bca', 'BcaB03g12119' => 'bca', 'BcaB03g12120' => 'bca', 'BcaB03g13945' => 'bca', 'BcaB04g17123' => 'bca', 'BcaB04g17867' => 'bca', 'BcaB04g19839' => 'bca', 'BcaB07g30317' => 'bca', 'BcaB07g32432' => 'bca', 'BcaB07g33362' => 'bca', 'BcaB08g36611' => 'bca', 'BcaC01g00028' => 'bca', 'BcaC01g01356' => 'bca', 'BcaC01g02034' => 'bca', 'BcaC01g06051' => 'bca', 'BcaC03g16839' => 'bca', 'BcaC03g17176' => 'bca', 'BcaC05g26829' => 'bca', 'BcaC06g31490' => 'bca', 'BcaC06g35344' => 'bca', 'BcaC06g36570' => 'bca', 'BcaC07g37537' => 'bca', 'BcaC08g43491' => 'bca', 'BcaC08g43773' => 'bca', 'BcaNung00234' => 'bca', 'BcaNung01982' => 'bca', 'BcaNung03707' => 'bca', 'BcaNung06454' => 'bca', 'BolC2t10762H' => 'bol', 'BolC2t11191H' => 'bol', 'BolC3t14322H' => 'bol', 'BolC3t19747H' => 'bol', 'BolC3t21425H' => 'bol', 'BolC4t27800H' => 'bol', 'BolC5t31423H' => 'bol', 'BolC6t35951H' => 'bol', 'BolC6t36282H' => 'bol', 'BolC7t40678H' => 'bol', 'BolC7t40679H' => 'bol', 'BolC7t42222H' => 'bol', 'BolC7t43492H' => 'bol', 'BolC7t46785H' => 'bol', 'BolC8t47853H' => 'bol', 'BolC9t56805H' => 'bol', 'BraA02t08000Z' => 'bra', 'BraA02t08341Z' => 'bra', 'BraA03t10936Z' => 'bra', 'BraA03t15657Z' => 'bra', 'BraA04t18100Z' => 'bra', 'BraA05t20523Z' => 'bra', 'BraA06t23353Z' => 'bra', 'BraA06t27473Z' => 'bra', 'BraA06t27769Z' => 'bra', 'BraA07t28928Z' => 'bra', 'BraA08t32236Z' => 'bra', 'BraA08t32841Z' => 'bra', 'BraA08t34524Z' => 'bra', 'BraA09t38742Z' => 'bra', 'BraA09t39295Z' => 'bra', 'C02p47180' => 'bna', 'C02p50990' => 'bna', 'C03p19360' => 'bna', 'C03p74950' => 'bna', 'C03p91000' => 'bna', 'C04p63260' => 'bna', 'C05p27050' => 'bna', 'C06p08750' => 'bna', 'C06p11490' => 'bna', 'C07p02820' => 'bna', 'C07p17180' => 'bna', 'C07p29440' => 'bna', 'C07p63730' => 'bna', 'C09p39260' => 'bna', 'CAN.G1164.34' => 'can', 'CAN.G1164.39' => 'can', 'CAN.G1530.3' => 'can', 'CAN.G162.61' => 'can', 'CAN.G176.6' => 'can', 'CAN.G289.49' => 'can', 'CAN.G370.21' => 'can', 'CAN.G370.22' => 'can', 'CAN.G371.117' => 'can', 'CAN.G58.37' => 'can', 'CAN.G588.98' => 'can', 'CANSAT21G2266' => 'cansat', 'CANSAT25G2799' => 'cansat', 'CANSAT35G0862' => 'cansat', 'CANSAT35G1704' => 'cansat', 'CANSAT35G1760' => 'cansat', 'CANSAT56G3971' => 'cansat', 'CANSAT56G4116' => 'cansat', 'CANSAT80G1259' => 'cansat', 'CARHR027730' => 'chi', 'CARHR033880' => 'chi', 'CARHR043270' => 'chi', 'CARHR145330' => 'chi', 'CARHR145340' => 'chi', 'CARHR175570' => 'chi', 'CARHR181570' => 'chi', 'CARHR258470' => 'chi', 'CARHR260490' => 'chi', 'CARHR294220' => 'chi', 'Carub.0001s2668' => 'cru', 'Carub.0001s3257' => 'cru', 'Carub.0001s4220' => 'cru', 'Carub.0005s0179' => 'cru', 'Carub.0006s2807' => 'cru', 'Carub.0007s0039' => 'cru', 'Carub.0008s0169' => 'cru', 'Carub.0008s0636' => 'cru', 'Ca_00338_v3' => 'car', 'Ca_00542_v3' => 'car', 'Ca_01844_v3' => 'car', 'Ca_10611_v3' => 'car', 'Ca_13326_v3' => 'car', 'Ca_17944_v3' => 'car', 'Ca_18546_v3' => 'car', 'Ca_24219_v3' => 'car', 'Ca_29972_v3' => 'car', 'CBR_g3681' => 'cbr', 'CBR_g40021' => 'cbr', 'Cc01_g08140' => 'ccan', 'Cc02_g13410' => 'ccan', 'Cc02_g37480' => 'ccan', 'Cc05_g12030' => 'ccan', 'Cc09_g03370' => 'ccan', 'Cc09_g10300' => 'ccan', 'Cc10_g03530' => 'ccan', 'Cc10_g11380' => 'ccan', 'CDE01G0176' => 'cde', 'CDE02G0675' => 'cde', 'CDE02G0942' => 'cde', 'CDE02G1153' => 'cde', 'CDE02G4177' => 'cde', 'CDE04G2117' => 'cde', 'CDE04G2736' => 'cde', 'CDE08G1161' => 'cde', 'CDE09G1238' => 'cde', 'Cfa000467' => 'cfa', 'Cfa000947' => 'cfa', 'Cfa004969' => 'cfa', 'Cfa005284' => 'cfa', 'Cfa008993' => 'cfa', 'Cfa018187' => 'cfa', 'Cfa018454' => 'cfa', 'Cfa020585' => 'cfa', 'Ciclev10000424m.g' => 'ccl', 'Ciclev10003605m.g' => 'ccl', 'Ciclev10007828m.g' => 'ccl', 'Ciclev10014620m.g' => 'ccl', 'Ciclev10015169m.g' => 'ccl', 'Ciclev10018291m.g' => 'ccl', 'Ciclev10028256m.g' => 'ccl', 'Ciclev10033822m.g' => 'ccl', 'CiPaw.05G060300' => 'cil', 'CiPaw.05G085000' => 'cil', 'CiPaw.06G083700' => 'cil', 'CiPaw.06G120300' => 'cil', 'CiPaw.09G060500' => 'cil', 'CiPaw.09G123800' => 'cil', 'CiPaw.11G169700' => 'cil', 'CiPaw.12G118300' => 'cil', 'CiPaw.15G071000' => 'cil', 'CiPaw.15G081900' => 'cil', 'ClCG01G024610' => 'cla', 'ClCG03G006070' => 'cla', 'ClCG05G019250' => 'cla', 'ClCG09G009500' => 'cla', 'ClCG11G008200' => 'cla', 'ClCG11G018080' => 'cla', 'COL.COLO4_17373' => 'col', 'COL.COLO4_22994' => 'col', 'COL.COLO4_26389' => 'col', 'COL.COLO4_27170' => 'col', 'COL.COLO4_31074' => 'col', 'COL.COLO4_31465' => 'col', 'COL.COLO4_36438' => 'col', 'COL.COLO4_36439' => 'col', 'Cpa.g.c38781' => 'cpa', 'Cpa.g.sc128.12' => 'cpa', 'Cpa.g.sc166.7' => 'cpa', 'Cpa.g.sc166.8' => 'cpa', 'Cpa.g.sc20.111' => 'cpa', 'Cpa.g.sc27.31' => 'cpa', 'Cpa.g.sc64.36' => 'cpa', 'Cpa.g.sc64.37' => 'cpa', 'Cpa.g.sc66.49' => 'cpa', 'Cpa.g.sc80.64' => 'cpa', 'CsaV3_1G012320' => 'csa', 'CsaV3_2G008480' => 'csa', 'CsaV3_2G033450' => 'csa', 'CsaV3_3G044830' => 'csa', 'CsaV3_4G033710' => 'csa', 'CsaV3_6G051730' => 'csa', 'CsaV3_7G025350' => 'csa', 'CSS0001067' => 'camsi', 'CSS0005996' => 'camsi', 'CSS0006590' => 'camsi', 'CSS0009673' => 'camsi', 'CSS0010201' => 'camsi', 'CSS0010549' => 'camsi', 'CSS0011364' => 'camsi', 'CSS0014473' => 'camsi', 'CSS0014961' => 'camsi', 'CSS0020191' => 'camsi', 'CSS0021165' => 'camsi', 'CSS0022306' => 'camsi', 'CSS0030591' => 'camsi', 'CSS0030696' => 'camsi', 'CSS0032653' => 'camsi', 'CSS0037487' => 'camsi', 'CSS0041102' => 'camsi', 'CSS0041261' => 'camsi', 'CSS0046246' => 'camsi', 'CSS0049256' => 'camsi', 'DCAR_004075' => 'dca', 'DCAR_011538' => 'dca', 'DCAR_019553' => 'dca', 'DCAR_020952' => 'dca', 'DCAR_021739' => 'dca', 'DCAR_027407' => 'dca', 'DCAR_027913' => 'dca', 'DCAR_028066' => 'dca', 'Dinv05899' => 'din', 'Dinv07563' => 'din', 'Dinv08010' => 'din', 'Dinv14125' => 'din', 'Dinv20172' => 'din', 'Dinv30743' => 'din', 'Dinv31229' => 'din', 'Dinv34162' => 'din', 'Dinv36028' => 'din', 'Dinv39368' => 'din', 'Dinv40565' => 'din', 'Dinv41706' => 'din', 'Duzib052G0089' => 'dzi', 'Duzib116G0641' => 'dzi', 'Duzib132G0069' => 'dzi', 'Duzib132G1219' => 'dzi', 'Duzib147G0278' => 'dzi', 'Duzib160G0480' => 'dzi', 'Duzib170G0661' => 'dzi', 'Duzib177G0591' => 'dzi', 'Duzib187G1353' => 'dzi', 'Duzib192G0858' => 'dzi', 'Duzib192G0883' => 'dzi', 'Duzib213G0506' => 'dzi', 'Duzib235G0289' => 'dzi', 'Duzib251G0422' => 'dzi', 'ECA232G3898' => 'eca', 'ECA233G5950' => 'eca', 'ECA234G1699' => 'eca', 'ECA234G2421' => 'eca', 'ECA236G0426' => 'eca', 'ECA236G4331' => 'eca', 'ECA248G2573' => 'eca', 'EL10Ac1g00077' => 'bvu', 'EL10Ac1g01746' => 'bvu', 'EL10Ac2g03464' => 'bvu', 'EL10Ac4g08176' => 'bvu', 'EL10Ac7g17521' => 'bvu', 'EL10Ac8g20386' => 'bvu', 'EL10Ac9g21343' => 'bvu', 'EL10Ac9g22688' => 'bvu', 'Eucgr.B03434' => 'egr', 'Eucgr.D00618' => 'egr', 'Eucgr.E02395' => 'egr', 'Eucgr.F01129' => 'egr', 'Eucgr.F02622' => 'egr', 'Eucgr.F04207' => 'egr', 'FAN01G0570' => 'fan', 'FAN03G3351' => 'fan', 'FAN06G3702' => 'fan', 'FAN07G2149' => 'fan', 'FAN10G3758' => 'fan', 'FAN11G1170' => 'fan', 'FAN11G2050' => 'fan', 'FAN11G2724' => 'fan', 'FAN12G1700' => 'fan', 'FAN12G2028' => 'fan', 'FAN15G1160' => 'fan', 'FAN15G3063' => 'fan', 'FAN16G2540' => 'fan', 'FAN16G3077' => 'fan', 'FAN16G3624' => 'fan', 'FAN17G0221' => 'fan', 'FAN20G2492' => 'fan', 'FAN20G2905' => 'fan', 'FAN21G0548' => 'fan', 'FAN21G1300' => 'fan', 'FAN22G0077' => 'fan', 'FAN22G1315' => 'fan', 'FAN24G1280' => 'fan', 'FAN24G1445' => 'fan', 'FAN24G3527' => 'fan', 'FAN25G0464' => 'fan', 'FAN25G2885' => 'fan', 'FAN25G3270' => 'fan', 'FAN27G1101' => 'fan', 'FAN27G2846' => 'fan', 'FAN27G3524' => 'fan', 'FvH4_2g11770' => 'fve', 'FvH4_2g15630' => 'fve', 'FvH4_3g05570' => 'fve', 'FvH4_3g09110' => 'fve', 'FvH4_3g19940' => 'fve', 'FvH4_4g04821' => 'fve', 'FvH4_4g31480' => 'fve', 'FvH4_7g01740' => 'fve', 'Glyma.05G130400' => 'gma', 'Glyma.05G156400' => 'gma', 'Glyma.07G197000' => 'gma', 'Glyma.08G085151' => 'gma', 'Glyma.08G114500' => 'gma', 'Glyma.08G300400' => 'gma', 'Glyma.10G215800' => 'gma', 'Glyma.12G224400' => 'gma', 'Glyma.13G179300' => 'gma', 'Glyma.13G218151' => 'gma', 'Glyma.13G238800' => 'gma', 'Glyma.13G276900' => 'gma', 'Glyma.14G078200' => 'gma', 'Glyma.15G074500' => 'gma', 'Glyma.15G094100' => 'gma', 'Glyma.17G247200' => 'gma', 'Glyma.18G120100' => 'gma', 'Glyma.20G176000' => 'gma', 'Gohir.A01G063600' => 'ghi', 'Gohir.A01G170301' => 'ghi', 'Gohir.A02G060500' => 'ghi', 'Gohir.A05G133850' => 'ghi', 'Gohir.A05G161400' => 'ghi', 'Gohir.A06G012900' => 'ghi', 'Gohir.A06G035901' => 'ghi', 'Gohir.A06G127100' => 'ghi', 'Gohir.A06G210500' => 'ghi', 'Gohir.A08G008650' => 'ghi', 'Gohir.A09G072700' => 'ghi', 'Gohir.A09G088301' => 'ghi', 'Gohir.A10G040600' => 'ghi', 'Gohir.A12G036300' => 'ghi', 'Gohir.A12G143350' => 'ghi', 'Gohir.A12G165500' => 'ghi', 'Gohir.A13G145700' => 'ghi', 'Gohir.D01G050000' => 'ghi', 'Gohir.D01G051366' => 'ghi', 'Gohir.D01G161350' => 'ghi', 'Gohir.D02G065900' => 'ghi', 'Gohir.D05G164200' => 'ghi', 'Gohir.D05G355500' => 'ghi', 'Gohir.D06G010400' => 'ghi', 'Gohir.D06G111250' => 'ghi', 'Gohir.D06G132000' => 'ghi', 'Gohir.D06G210500' => 'ghi', 'Gohir.D07G165675' => 'ghi', 'Gohir.D08G062240' => 'ghi', 'Gohir.D08G086101' => 'ghi', 'Gohir.D08G138060' => 'ghi', 'Gohir.D09G072300' => 'ghi', 'Gohir.D10G041400' => 'ghi', 'Gohir.D11G191020' => 'ghi', 'Gohir.D11G212066' => 'ghi', 'Gohir.D12G036300' => 'ghi', 'Gohir.D12G168600' => 'ghi', 'Gohir.D13G150600' => 'ghi', 'Gorai.001G057300' => 'gra', 'Gorai.002G069900' => 'gra', 'Gorai.002G200000' => 'gra', 'Gorai.003G067600' => 'gra', 'Gorai.005G074800' => 'gra', 'Gorai.006G087300' => 'gra', 'Gorai.008G037500' => 'gra', 'Gorai.008G181400' => 'gra', 'Gorai.009G169400' => 'gra', 'Gorai.009G387900' => 'gra', 'Gorai.010G013300' => 'gra', 'Gorai.010G153800' => 'gra', 'Gorai.010G255800' => 'gra', 'Gorai.011G043700' => 'gra', 'Gorai.011G198900' => 'gra', 'Gorai.013G168400' => 'gra', 'GSVIVG01005212001' => 'vvi', 'GSVIVG01006163001' => 'vvi', 'GSVIVG01009625001' => 'vvi', 'GSVIVG01014338001' => 'vvi', 'GSVIVG01020005001' => 'vvi', 'GSVIVG01021450001' => 'vvi', 'GSVIVG01023975001' => 'vvi', 'GSVIVG01034490001' => 'vvi', 'HanXRQChr04g0112071' => 'han', 'HanXRQChr05g0131151' => 'han', 'HanXRQChr09g0262371' => 'han', 'HanXRQChr09g0268401' => 'han', 'HanXRQChr10g0279241' => 'han', 'HanXRQChr10g0297961' => 'han', 'HanXRQChr11g0326231' => 'han', 'HanXRQChr11g0328471' => 'han', 'HanXRQChr16g0507941' => 'han', 'HanXRQChr17g0560211' => 'han', 'Haze_02108' => 'cav', 'Haze_02428' => 'cav', 'Haze_05593' => 'cav', 'Haze_06448' => 'cav', 'Haze_09427' => 'cav', 'Haze_12022' => 'cav', 'Haze_17612' => 'cav', 'Haze_17928' => 'cav', 'Hma1.2p1_0032F.1_g019250' => 'hma', 'Hma1.2p1_0163F.1_g072690' => 'hma', 'Hma1.2p1_0265F.1_g106710' => 'hma', 'Hma1.2p1_0286F.1_g113970' => 'hma', 'Hma1.2p1_0363F.1_g136640' => 'hma', 'Hma1.2p1_0584F.1_g183470' => 'hma', 'Hma1.2p1_0885F.1_g232570' => 'hma', 'HPP92_006022' => 'vpl', 'HPP92_007320' => 'vpl', 'HPP92_011521' => 'vpl', 'HPP92_019387' => 'vpl', 'HPP92_024038' => 'vpl', 'Hund05891' => 'sun', 'Hund06450' => 'sun', 'Hund12053' => 'sun', 'Hund16800' => 'sun', 'Hund21222' => 'sun', 'Hund22896' => 'sun', 'Hund23746' => 'sun', 'Hund27083' => 'sun', 'Lalb_Chr02g0141831' => 'lal', 'Lalb_Chr02g0141841' => 'lal', 'Lalb_Chr05g0220411' => 'lal', 'Lalb_Chr06g0162081' => 'lal', 'Lalb_Chr09g0327651' => 'lal', 'Lalb_Chr13g0295051' => 'lal', 'Lalb_Chr15g0086801' => 'lal', 'Lalb_Chr16g0383781' => 'lal', 'Lalb_Chr16g0383791' => 'lal', 'Lalb_Chr18g0055441' => 'lal', 'Lalb_Chr18g0059611' => 'lal', 'Lalb_Chr20g0109661' => 'lal', 'Lalb_Chr20g0109831' => 'lal', 'Lalb_Chr20g0121871' => 'lal', 'Lalb_Chr22g0355361' => 'lal', 'Lalb_Chr25g0286371' => 'lal', 'Lj1A1187G43' => 'lonja', 'Lj1A1205T50' => 'lonja', 'Lj1A800G33' => 'lonja', 'Lj1C1187T7' => 'lonja', 'Lj1C843T11' => 'lonja', 'Lj1g0010940' => 'lja', 'Lj2A288T69' => 'lonja', 'Lj3g0024276' => 'lja', 'Lj4A47T76' => 'lonja', 'Lj4g0005805' => 'lja', 'Lj4g0006097' => 'lja', 'Lj4g0008528' => 'lja', 'Lj4g0024907' => 'lja', 'Lj5g0012472' => 'lja', 'Lj5g0018648' => 'lja', 'Lj6C789G1' => 'lonja', 'Lj6g0004000' => 'lja', 'Lj7A292G67' => 'lonja', 'Lj7A292T64' => 'lonja', 'Lj9A400T58' => 'lonja', 'Lsat_1_v5_gn_1_126181' => 'lsa', 'Lsat_1_v5_gn_4_123041' => 'lsa', 'Lsat_1_v5_gn_4_133620' => 'lsa', 'Lsat_1_v5_gn_4_53221' => 'lsa', 'Lsat_1_v5_gn_4_71961' => 'lsa', 'Lsat_1_v5_gn_7_105241' => 'lsa', 'Lsat_1_v5_gn_7_21361' => 'lsa', 'Lsat_1_v5_gn_7_28860' => 'lsa', 'Lsat_1_v5_gn_7_31260' => 'lsa', 'Lsat_1_v5_gn_8_52801' => 'lsa', 'Manes.02G191400' => 'mes', 'Manes.03G110100' => 'mes', 'Manes.04G071100' => 'mes', 'Manes.05G100500' => 'mes', 'Manes.05G164700' => 'mes', 'Manes.15G087000' => 'mes', 'Manes.15G121500' => 'mes', 'Manes.16G028300' => 'mes', 'Manes.17G046100' => 'mes', 'Manes.17G069800' => 'mes', 'Manes.18G100500' => 'mes', 'Mapoly0002s0109' => 'mpo', 'Mapoly0024s0007' => 'mpo', 'Mapoly0089s0032' => 'mpo', 'MBI04_g42241_MAGBIO' => 'mbi', 'MBI05_g11988_MAGBIO' => 'mbi', 'MBI05_g35452_MAGBIO' => 'mbi', 'MBI07_g30179_MAGBIO' => 'mbi', 'MBI07_g35859_MAGBIO' => 'mbi', 'MBI07_g35860_MAGBIO' => 'mbi', 'MBI07_g37166_MAGBIO' => 'mbi', 'MBI08_g18172_MAGBIO' => 'mbi', 'MBI09_g08441_MAGBIO' => 'mbi', 'MBI13_g01676_MAGBIO' => 'mbi', 'MBI14_g42955_MAGBIO' => 'mbi', 'MBI16_g13161_MAGBIO' => 'mbi', 'MBI17_g27204_MAGBIO' => 'mbi', 'MBI19_g21595_MAGBIO' => 'mbi', 'MD00G1148400' => 'mdo', 'MD02G1301200' => 'mdo', 'MD03G1227800' => 'mdo', 'MD05G1041100' => 'mdo', 'MD05G1124800' => 'mdo', 'MD05G1284000' => 'mdo', 'MD05G1338800' => 'mdo', 'MD05G1338900' => 'mdo', 'MD07G1022800' => 'mdo', 'MD10G1047500' => 'mdo', 'MD10G1127500' => 'mdo', 'MD10G1262300' => 'mdo', 'MD10G1293800' => 'mdo', 'MD16G1074300' => 'mdo', 'Medtr1g021670' => 'mtr', 'Medtr1g096320' => 'mtr', 'Medtr2g013690' => 'mtr', 'Medtr2g019450' => 'mtr', 'Medtr2g085170' => 'mtr', 'Medtr4g088785' => 'mtr', 'Medtr8g055930' => 'mtr', 'Medtr8g085850' => 'mtr', 'MELO3C002605.2' => 'cme', 'MELO3C003891.2' => 'cme', 'MELO3C004012.2' => 'cme', 'MELO3C007134.2' => 'cme', 'MELO3C008118.2' => 'cme', 'MELO3C016700.2' => 'cme', 'MELO3C024127.2' => 'cme', 'MELO3C033361.2' => 'cme', 'MELO3C033362.2' => 'cme', 'Migut.C00430' => 'egut', 'Migut.C01246' => 'egut', 'Migut.E00101' => 'egut', 'Migut.H01486' => 'egut', 'Migut.H01939' => 'egut', 'Migut.K00360' => 'egut', 'Migut.M00910' => 'egut', 'Migut.M01139' => 'egut', 'Migut.N02677' => 'egut', 'MSTRG.13252' => 'ama', 'MSTRG.14701' => 'ama', 'MSTRG.1521' => 'ama', 'MSTRG.15884' => 'ama', 'MSTRG.16242' => 'ama', 'MSTRG.22285' => 'ama', 'MSTRG.22444' => 'ama', 'MSTRG.2349' => 'ama', 'MSTRG.26308' => 'ama', 'MSTRG.28296' => 'ama', 'MSTRG.9895' => 'ama', 'Nitab4.5_0000110g0060' => 'nta', 'Nitab4.5_0000420g0130' => 'nta', 'Nitab4.5_0000422g0030' => 'nta', 'Nitab4.5_0000560g0180' => 'nta', 'Nitab4.5_0000703g0100' => 'nta', 'Nitab4.5_0000786g0200' => 'nta', 'Nitab4.5_0001336g0020' => 'nta', 'Nitab4.5_0001796g0030' => 'nta', 'Nitab4.5_0003348g0060' => 'nta', 'Nitab4.5_0003698g0040' => 'nta', 'Nitab4.5_0003942g0090' => 'nta', 'Nitab4.5_0004775g0070' => 'nta', 'Nitab4.5_0004864g0030' => 'nta', 'Nitab4.5_0005615g0020' => 'nta', 'Nitab4.5_0009288g0030' => 'nta', 'Nitab4.5_0009341g0010' => 'nta', 'Nitab4.5_0009535g0010' => 'nta', 'Nn1g03995' => 'nnu', 'Nn1g04100' => 'nnu', 'Nn1g06530' => 'nnu', 'Nn3g16404' => 'nnu', 'Nn3g17212' => 'nnu', 'Nn3g20776' => 'nnu', 'Nn3g21923' => 'nnu', 'Nn5g27737' => 'nnu', 'Nn5g29461' => 'nnu', 'Nn7g38355' => 'nnu', 'Nn8g39873' => 'nnu', 'Oeu000548.2' => 'oeu', 'Oeu004672.1' => 'oeu', 'Oeu015605.2' => 'oeu', 'Oeu016092.1' => 'oeu', 'Oeu017879.3' => 'oeu', 'Oeu024910.1' => 'oeu', 'Oeu028965.1' => 'oeu', 'Oeu031269.1' => 'oeu', 'Oeu031270.1' => 'oeu', 'Oeu032535.1' => 'oeu', 'Oeu034151.1' => 'oeu', 'Oeu034152.1' => 'oeu', 'Oeu034588.2' => 'oeu', 'Oeu050846.1' => 'oeu', 'Oeu050849.2' => 'oeu', 'Oeu051063.2' => 'oeu', 'Oeu052368.1' => 'oeu', 'Oeu052370.1' => 'oeu', 'Os01g0210400' => 'osa', 'Os01g0304300' => 'osa', 'Os01g0749100' => 'osa', 'Os02g0745800' => 'osa', 'Os03g0769050' => 'osa', 'Os05g0531500' => 'osa', 'Os06g0724300' => 'osa', 'Os11g0198100' => 'osa', 'Peaxi162Scf00069g01425' => 'pax', 'Peaxi162Scf00280g00811' => 'pax', 'Peaxi162Scf00310g00615' => 'pax', 'Peaxi162Scf00362g00542' => 'pax', 'Peaxi162Scf00461g00310' => 'pax', 'Peaxi162Scf00530g00118' => 'pax', 'Peaxi162Scf00541g00057' => 'pax', 'Peaxi162Scf00661g00017' => 'pax', 'Peaxi162Scf00926g00027' => 'pax', 'Peaxi162Scf01064g00263' => 'pax', 'Peaxi162Scf01211g00135' => 'pax', 'PGR004G2336' => 'pgr', 'PGR042G0327' => 'pgr', 'PGR042G1957' => 'pgr', 'PGR042G2003' => 'pgr', 'PGR042G3929' => 'pgr', 'PGR083G1137' => 'pgr', 'PGR083G1364' => 'pgr', 'PGSC0003DMG400003381' => 'stu', 'PGSC0003DMG400003417' => 'stu', 'PGSC0003DMG400008981' => 'stu', 'PGSC0003DMG400012417' => 'stu', 'PGSC0003DMG400012823' => 'stu', 'PGSC0003DMG400016885' => 'stu', 'PGSC0003DMG400022812' => 'stu', 'PGSC0003DMG400029726' => 'stu', 'PGSC0003DMG401009243' => 'stu', 'PGSC0003DMG401031505' => 'stu', 'PGSC0003DMG402031505' => 'stu', 'Phvul.001G017600' => 'pvu', 'Phvul.002G193500' => 'pvu', 'Phvul.002G228900' => 'pvu', 'Phvul.002G236800' => 'pvu', 'Phvul.003G049500' => 'pvu', 'Phvul.005G072000' => 'pvu', 'Phvul.006G164800' => 'pvu', 'Phvul.006G185100' => 'pvu', 'Phvul.007G090000' => 'pvu', 'Potri.001G399800' => 'ptr', 'Potri.002G149900' => 'ptr', 'Potri.004G044100' => 'ptr', 'Potri.004G177600' => 'ptr', 'Potri.009G138000' => 'ptr', 'Potri.010G094000' => 'ptr', 'Potri.011G053000' => 'ptr', 'Potri.011G119300' => 'ptr', 'Potri.013G113700' => 'ptr', 'Potri.018G107800' => 'ptr', 'Potri.019G084100' => 'ptr', 'Pp3c14_23720' => 'ppa', 'Pp3c16_6340' => 'ppa', 'Pp3c23_13420' => 'ppa', 'Pp3c24_2740' => 'ppa', 'Pp3c25_860' => 'ppa', 'Pp3c8_21750' => 'ppa', 'Prupe.1G273000' => 'ppe', 'Prupe.1G273700' => 'ppe', 'Prupe.1G274100' => 'ppe', 'Prupe.2G023300' => 'ppe', 'Prupe.4G048000' => 'ppe', 'Prupe.4G080400' => 'ppe', 'Prupe.4G181200' => 'ppe', 'Prupe.8G056900' => 'ppe', 'Prupe.8G168700' => 'ppe', 'Psat1g189080' => 'psa', 'Psat1g204760' => 'psa', 'Psat4g175560' => 'psa', 'Psat4g177720' => 'psa', 'Psat5g244240' => 'psa', 'Psat6g010720' => 'psa', 'Psat6g187200' => 'psa', 'Psat7g072040' => 'psa', 'PSO017G3501' => 'pso', 'PSO063G2148' => 'pso', 'PSO063G5608' => 'pso', 'PSO210G6392' => 'pso', 'PSO541G2319' => 'pso', 'PSO541G2836' => 'pso', 'PSO541G4012' => 'pso', 'PSO541G6253' => 'pso', 'PSO675G0580' => 'pso', 'PSO675G0856' => 'pso', 'PSO675G5635' => 'pso', 'PSO675G9157' => 'pso', 'PSO832G1660' => 'pso', 'PSO832G1969' => 'pso', 'QL02p007186' => 'qlo', 'QL02p033904' => 'qlo', 'QL03p064391' => 'qlo', 'QL05p040593' => 'qlo', 'QL05p058242' => 'qlo', 'QL08p021825' => 'qlo', 'QL11p004981' => 'qlo', 'RcHm_v2.0_Chr1g0318301' => 'rch', 'RcHm_v2.0_Chr4g0418501' => 'rch', 'RcHm_v2.0_Chr4g0439971' => 'rch', 'RcHm_v2.0_Chr5g0008541' => 'rch', 'RcHm_v2.0_Chr5g0014101' => 'rch', 'RcHm_v2.0_Chr5g0014131' => 'rch', 'RcHm_v2.0_Chr5g0033621' => 'rch', 'RcHm_v2.0_Chr6g0272041' => 'rch', 'RcHm_v2.0_Chr6g0278831' => 'rch', 'Rhsim02G0130400' => 'rsi', 'Rhsim02G0171100' => 'rsi', 'Rhsim05G0053000' => 'rsi', 'Rhsim05G0053100' => 'rsi', 'Rhsim06G0096500' => 'rsi', 'Rhsim06G0096600' => 'rsi', 'Rhsim06G0199100' => 'rsi', 'Rhsim12G0062300' => 'rsi', 'Rhsim12G0062800' => 'rsi', 'Sabra02G0118600' => 'sbr', 'Sabra04G0027300' => 'sbr', 'Sabra04G0119500' => 'sbr', 'Sabra08G0112500' => 'sbr', 'Sabra11G0036800' => 'sbr', 'Sabra11G0103800' => 'sbr', 'Sabra13G0096300' => 'sbr', 'Sabra16G0262300' => 'sbr', 'Sabra18G0091700' => 'sbr', 'Sabra19G0095400' => 'sbr', 'SalBow6G3080' => 'sbo', 'SalBow7G1157' => 'sbo', 'SalBow7G2123' => 'sbo', 'SalBow7G2285' => 'sbo', 'SalBow7G3537' => 'sbo', 'SalBow8G2947' => 'sbo', 'SalBow8G4463' => 'sbo', 'SalBow8G5466' => 'sbo', 'Sc01g0001750' => 'sci', 'Sc02g0006640' => 'sci', 'Sc02g0006670' => 'sci', 'Sc04g0008220' => 'sci', 'Sc05g0006190' => 'sci', 'Sc08g0002760' => 'sci', 'Sc17g0006170' => 'sci', 'Sc22g0002050' => 'sci', 'Sc23g0001190' => 'sci', 'Sc24g0000980' => 'sci', 'Sed0006245' => 'sed', 'Sed0007543' => 'sed', 'Sed0009411' => 'sed', 'Sed0010765' => 'sed', 'Sed0012944' => 'sed', 'Sed0014682' => 'sed', 'Sed0016174' => 'sed', 'Sed0016796' => 'sed', 'Sed0020317' => 'sed', 'Sed0021467' => 'sed', 'SEGI_01316' => 'sgi', 'SEGI_03374' => 'sgi', 'SEGI_16265' => 'sgi', 'SEGI_18569' => 'sgi', 'SEGI_20351' => 'sgi', 'SEGI_26395' => 'sgi', 'SEGI_29469' => 'sgi', 'SEGI_34771' => 'sgi', 'SEGI_36769' => 'sgi', 'SEGI_37139' => 'sgi', 'SGA_v2.0_scaffold100G29687' => 'sas', 'SGA_v2.0_scaffold118G32472' => 'sas', 'SGA_v2.0_scaffold14G07051' => 'sas', 'SGA_v2.0_scaffold183G39845' => 'sas', 'SGA_v2.0_scaffold1G00174' => 'sas', 'SGA_v2.0_scaffold22G09714' => 'sas', 'SGA_v2.0_scaffold333G48992' => 'sas', 'SGA_v2.0_scaffold46G17491' => 'sas', 'SGA_v2.0_scaffold49G18294' => 'sas', 'SGA_v2.0_scaffold63G21658' => 'sas', 'SHI01741' => 'shi', 'SHI05771' => 'shi', 'SHI18077' => 'shi', 'SHI20525' => 'shi', 'SHI20527' => 'shi', 'SHI20528' => 'shi', 'SMO172G0185' => 'smo', 'SMO198G0020' => 'smo', 'SMO351G0006' => 'smo', 'SMO356G0118' => 'smo', 'SMO358G0296' => 'smo', 'SMO367G0079' => 'smo', 'SMO367G1277' => 'smo', 'Solyc01g014220.3' => 'sly', 'Solyc01g111770.2' => 'sly', 'Solyc02g078180.3' => 'sly', 'Solyc03g006430.3' => 'sly', 'Solyc03g006456.1' => 'sly', 'Solyc03g079860.2' => 'sly', 'Solyc04g079770.3' => 'sly', 'Solyc05g007430.4' => 'sly', 'Solyc07g063150.3' => 'sly', 'Solyc08g016620.3' => 'sly', 'Solyc09g057590.3' => 'sly', 'Solyc09g057600.1' => 'sly', 'Solyc10g009050.3' => 'sly', 'Solyc11g017420.2' => 'sly', 'Sopen01g053810' => 'spe', 'Sopen02g023040' => 'spe', 'Sopen03g002440' => 'spe', 'Sopen04g033350' => 'spe', 'Sopen05g003310' => 'spe', 'Sopen07g004050' => 'spe', 'Sopen07g031340' => 'spe', 'Sopen08g006990' => 'spe', 'Sopen10g004830' => 'spe', 'Sopen11g009370' => 'spe', 'Sp1g24450' => 'spa', 'Sp1g29670' => 'spa', 'Sp1g39600' => 'spa', 'Sp2g11080' => 'spa', 'Sp2g13970' => 'spa', 'Sp4g16130' => 'spa', 'Sp6g13080' => 'spa', 'Sp7g37270' => 'spa', 'TAR371G0065' => 'tar', 'TAR376G0340' => 'tar', 'TAR376G0435' => 'tar', 'TAR381G0002' => 'tar', 'TAR381G1236' => 'tar', 'TAR624G0055' => 'tar', 'TAR624G0324' => 'tar', 'TAR624G0696' => 'tar', 'TAR624G0906' => 'tar', 'TAR625G0107' => 'tar', 'TAR626G0015' => 'tar', 'TAR626G1356' => 'tar', 'TAR627G0888' => 'tar', 'TAR628G0399' => 'tar', 'TAR628G1327' => 'tar', 'TAR629G2831' => 'tar', 'TAR629G2874' => 'tar', 'TAR633G1432' => 'tar', 'TAR633G2771' => 'tar', 'THA.LOC104803394' => 'tha', 'THA.LOC104805153' => 'tha', 'THA.LOC104806784' => 'tha', 'THA.LOC104810473' => 'tha', 'THA.LOC104813100' => 'tha', 'THA.LOC104814215' => 'tha', 'THA.LOC104815554' => 'tha', 'THA.LOC104820544' => 'tha', 'THA.LOC104824754' => 'tha', 'THA.LOC104827717' => 'tha', 'Thecc.02G031400' => 'tca', 'Thecc.02G055900' => 'tca', 'Thecc.02G350800' => 'tca', 'Thecc.06G150900' => 'tca', 'Thecc.06G186600' => 'tca', 'Thecc.07G089600' => 'tca', 'Thecc.08G020400' => 'tca', 'Thecc.08G182100' => 'tca', 'Thhalv10000873m.g' => 'esa', 'Thhalv10004185m.g' => 'esa', 'Thhalv10006981m.g' => 'esa', 'Thhalv10007204m.g' => 'esa', 'Thhalv10011374m.g' => 'esa', 'Thhalv10013482m.g' => 'esa', 'Thhalv10017801m.g' => 'esa', 'Thhalv10024983m.g' => 'esa', 'TPR.G12072' => 'tpr', 'TPR.G15769' => 'tpr', 'TPR.G16504' => 'tpr', 'TPR.G16506' => 'tpr', 'TPR.G24345' => 'tpr', 'TPR.G26666' => 'tpr', 'TPR.G27320' => 'tpr', 'TPR.G31819' => 'tpr', 'TPR.G38879' => 'tpr', 'TPR.G39015' => 'tpr', 'TPR.G8819' => 'tpr', 'TWI09G0924' => 'twi', 'TWI12G0811' => 'twi', 'TWI12G1294' => 'twi', 'TWI31G0150' => 'twi', 'TWI36G1262' => 'twi', 'TWI38G1287' => 'twi', 'TWI38G1633' => 'twi', 'TWI38G1982' => 'twi', 'TWI39G0116' => 'twi', 'TWI60G1011' => 'twi', 'TWI63G0171' => 'twi', 'TWI73G0839' => 'twi', 'TWI79G1511' => 'twi', 'unitig_0.g915' => 'ugi', 'unitig_0.g916' => 'ugi', 'unitig_21.g20219' => 'ugi', 'unitig_21.g20416' => 'ugi', 'unitig_578.g16132' => 'ugi', 'unitig_578.g16718' => 'ugi', 'unitig_62.g23481' => 'ugi', 'unitig_744.g24535' => 'ugi', 'unitig_749.g13525' => 'ugi', 'vmacro01248' => 'vma', 'vmacro02290' => 'vma', 'vmacro10946' => 'vma', 'vmacro11865' => 'vma', 'vmacro12493' => 'vma', 'vmacro17322' => 'vma', 'vmacro21599' => 'vma', 'vmacro23041' => 'vma', 'VMungo0251G0004' => 'vmu', 'VMungo0251G2639' => 'vmu', 'VMungo0251G2967' => 'vmu', 'VMungo0540G0864' => 'vmu', 'VMungo0540G1569' => 'vmu', 'VMungo0647G0317' => 'vmu', 'VMungo0720G1373' => 'vmu', 'VMungo0720G1508' => 'vmu', 'VMungo1080G0485' => 'vmu', 'VMungo1215G3177' => 'vmu', 'Zm00001eb112600' => 'zma', 'Zm00001eb120220' => 'zma', 'Zm00001eb153240' => 'zma', 'Zm00001eb168880' => 'zma', 'Zm00001eb213920' => 'zma', 'Zm00001eb228280' => 'zma', 'Zm00001eb254580' => 'zma', 'Zm00001eb272180' => 'zma', 'Zm00001eb293190' => 'zma', 'Zm00001eb322930' => 'zma', 'Zm00001eb353360' => 'zma', 'Zm00001eb353390' => 'zma', 'Zm00001eb353430' => 'zma', 'Zm00001eb353440' => 'zma', 'Zm00001eb353780' => 'zma' ) $gf_id = 'HOM05D000499' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000499' ) $data_identifier = 'HOM05D000499' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 29, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 12, 'amhyb' => (int) 8, 'aly' => (int) 12, 'aox' => (int) 9, 'arhy' => (int) 26, 'ath' => (int) 8, 'atr' => (int) 7, 'acertr' => (int) 10, 'cqu' => (int) 15, 'bca' => (int) 29, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 11, 'cansat' => (int) 8, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 9, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 8, 'cpa' => (int) 10, 'csa' => (int) 7, 'camsi' => (int) 20, 'dca' => (int) 8, 'din' => (int) 12, 'dzi' => (int) 14, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 6, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 38, 'gra' => (int) 16, 'vvi' => (int) 8, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 5, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 11, 'lja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 11, 'mpo' => (int) 3, 'mbi' => (int) 14, 'mdo' => (int) 14, 'mtr' => (int) 8, 'cme' => (int) 9, 'egut' => (int) 9, 'ama' => (int) 11, 'nta' => (int) 17, 'nnu' => (int) 11, 'oeu' => (int) 18, 'osa' => (int) 8, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 6, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 9, 'rsi' => (int) 9, 'sbr' => (int) 10, 'sbo' => (int) 8, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 10, 'sas' => (int) 10, 'shi' => (int) 6, 'smo' => (int) 7, 'sly' => (int) 14, 'spe' => (int) 10, 'spa' => (int) 8, 'tar' => (int) 19, 'tha' => (int) 10, 'tca' => (int) 8, 'esa' => (int) 8, 'tpr' => (int) 11, 'twi' => (int) 13, 'ugi' => (int) 9, 'vma' => (int) 8, 'vmu' => (int) 10, 'zma' => (int) 15 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb353780' $species_info = array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ) $local_species = 'stu' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000499', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1066', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p29780' => 'bna', 'A02p33180' => 'bna', 'A03p16470' => 'bna', 'A03p66010' => 'bna', 'A04p25970' => 'bna', 'A06p01270' => 'bna', 'A06p46080' => 'bna', 'A07p11400' => 'bna', 'A08p01840' => 'bna', 'A08p08230' => 'bna', 'A08p25740' => 'bna', 'A09p32070' => 'bna', 'A09p37830' => 'bna', 'A09p42840' => 'bna', 'A09p42850' => 'bna', 'Aa31LG10G2060' => 'aar', 'Aa31LG2G7410' => 'aar', 'Aa31LG6G10200' => 'aar', 'Aa31LG6G16680' => 'aar', 'Aa31LG6G8470' => 'aar', 'Aa31LG9G12730' => 'aar', 'Aa31LG9G13680' => 'aar', 'Aa31LG9G14920' => 'aar', 'Aa31LG9G6650' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4977' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5467' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3254' => 'aag', 'Actinidia02578' => 'ach', 'Actinidia07693' => 'ach', 'Actinidia08413' => 'ach', 'Actinidia08414' => 'ach', 'Actinidia15289' => 'ach', 'Actinidia19871' => 'ach', 'Actinidia21475' => 'ach', 'Actinidia22576' => 'ach', 'Actinidia28327' => 'ach', 'Actinidia32491' => 'ach', 'Actinidia39463' => 'ach', 'Actinidia39571' => 'ach', 'Ah.01g013750' => 'amhyb', 'Ah.01g023210' => 'amhyb', 'Ah.04g164850' => 'amhyb', 'Ah.05g178060' => 'amhyb', 'Ah.07g204270' => 'amhyb', 'Ah.07g208480' => 'amhyb', 'Ah.09g237410' => 'amhyb', 'Ah.14g089460' => 'amhyb', 'AL1G41790' => 'aly', 'AL1G49050' => 'aly', 'AL1G53810' => 'aly', 'AL1G61400' => 'aly', 'AL4G18580' => 'aly', 'AL5G12510' => 'aly', 'AL5G12540' => 'aly', 'AL6G43230' => 'aly', 'AL7G10370' => 'aly', 'AL7G19250' => 'aly', 'AL8G12240' => 'aly', 'AL8G18540' => 'aly', 'Aqoxy1G02409' => 'aox', 'Aqoxy2G03993' => 'aox', 'Aqoxy3G03357' => 'aox', 'Aqoxy4G00785' => 'aox', 'Aqoxy5G02598' => 'aox', 'Aqoxy6G00132' => 'aox', 'Aqoxy7G01776' => 'aox', 'Aqoxy7G02316' => 'aox', 'Aqoxy7G03973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.12AFKW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B8730' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27IQR1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3F75VG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3RE0GA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41TCQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.527VTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FIR39' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5W8UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DA38EV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ63HS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H1I32C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HC27T5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4M8AP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7N3CZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9UVDZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LS1NQA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT1D4B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SKC4TM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCFV76' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF9Q1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQWD9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1ZM88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WE07RT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YCK7VH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJE6Q6' => 'arhy', 'AT1G28240' => 'ath', 'AT1G34550' => 'ath', 'AT1G53040' => 'ath', 'AT2G02910' => 'ath', 'AT4G09630' => 'ath', 'AT4G38500' => 'ath', 'AT5G42660' => 'ath', 'AT5G46220' => 'ath', 'ATR0152G026' => 'atr', 'ATR0564G343' => 'atr', 'ATR0706G151' => 'atr', 'ATR0733G207' => 'atr', 'ATR0751G234' => 'atr', 'ATR0807G048' => 'atr', 'ATR1091G084' => 'atr', 'Atru.chr10.1229' => 'acertr', 'Atru.chr10.1230' => 'acertr', 'Atru.chr10.1874' => 'acertr', 'Atru.chr11.1808' => 'acertr', 'Atru.chr13.1795' => 'acertr', 'Atru.chr13.570' => 'acertr', 'Atru.chr2.2608' => 'acertr', 'Atru.chr2.2609' => 'acertr', 'Atru.chr5.3428' => 'acertr', 'Atru.chr8.1171' => 'acertr', 'AUR62004651' => 'cqu', 'AUR62008675' => 'cqu', 'AUR62010014' => 'cqu', 'AUR62013004' => 'cqu', 'AUR62014825' => 'cqu', 'AUR62015015' => 'cqu', 'AUR62015151' => 'cqu', 'AUR62017020' => 'cqu', 'AUR62019422' => 'cqu', 'AUR62023570' => 'cqu', 'AUR62025571' => 'cqu', 'AUR62029098' => 'cqu', 'AUR62033863' => 'cqu', 'AUR62034296' => 'cqu', 'AUR62040075' => 'cqu', 'BcaB02g07334' => 'bca', 'BcaB02g10575' => 'bca', 'BcaB03g12119' => 'bca', 'BcaB03g12120' => 'bca', 'BcaB03g13945' => 'bca', 'BcaB04g17123' => 'bca', 'BcaB04g17867' => 'bca', 'BcaB04g19839' => 'bca', 'BcaB07g30317' => 'bca', 'BcaB07g32432' => 'bca', 'BcaB07g33362' => 'bca', 'BcaB08g36611' => 'bca', 'BcaC01g00028' => 'bca', 'BcaC01g01356' => 'bca', 'BcaC01g02034' => 'bca', 'BcaC01g06051' => 'bca', 'BcaC03g16839' => 'bca', 'BcaC03g17176' => 'bca', 'BcaC05g26829' => 'bca', 'BcaC06g31490' => 'bca', 'BcaC06g35344' => 'bca', 'BcaC06g36570' => 'bca', 'BcaC07g37537' => 'bca', 'BcaC08g43491' => 'bca', 'BcaC08g43773' => 'bca', 'BcaNung00234' => 'bca', 'BcaNung01982' => 'bca', 'BcaNung03707' => 'bca', 'BcaNung06454' => 'bca', 'BolC2t10762H' => 'bol', 'BolC2t11191H' => 'bol', 'BolC3t14322H' => 'bol', 'BolC3t19747H' => 'bol', 'BolC3t21425H' => 'bol', 'BolC4t27800H' => 'bol', 'BolC5t31423H' => 'bol', 'BolC6t35951H' => 'bol', 'BolC6t36282H' => 'bol', 'BolC7t40678H' => 'bol', 'BolC7t40679H' => 'bol', 'BolC7t42222H' => 'bol', 'BolC7t43492H' => 'bol', 'BolC7t46785H' => 'bol', 'BolC8t47853H' => 'bol', 'BolC9t56805H' => 'bol', 'BraA02t08000Z' => 'bra', 'BraA02t08341Z' => 'bra', 'BraA03t10936Z' => 'bra', 'BraA03t15657Z' => 'bra', 'BraA04t18100Z' => 'bra', 'BraA05t20523Z' => 'bra', 'BraA06t23353Z' => 'bra', 'BraA06t27473Z' => 'bra', 'BraA06t27769Z' => 'bra', 'BraA07t28928Z' => 'bra', 'BraA08t32236Z' => 'bra', 'BraA08t32841Z' => 'bra', 'BraA08t34524Z' => 'bra', 'BraA09t38742Z' => 'bra', 'BraA09t39295Z' => 'bra', 'C02p47180' => 'bna', 'C02p50990' => 'bna', 'C03p19360' => 'bna', 'C03p74950' => 'bna', 'C03p91000' => 'bna', 'C04p63260' => 'bna', 'C05p27050' => 'bna', 'C06p08750' => 'bna', 'C06p11490' => 'bna', 'C07p02820' => 'bna', 'C07p17180' => 'bna', 'C07p29440' => 'bna', 'C07p63730' => 'bna', 'C09p39260' => 'bna', 'CAN.G1164.34' => 'can', 'CAN.G1164.39' => 'can', 'CAN.G1530.3' => 'can', 'CAN.G162.61' => 'can', 'CAN.G176.6' => 'can', 'CAN.G289.49' => 'can', 'CAN.G370.21' => 'can', 'CAN.G370.22' => 'can', 'CAN.G371.117' => 'can', 'CAN.G58.37' => 'can', 'CAN.G588.98' => 'can', 'CANSAT21G2266' => 'cansat', 'CANSAT25G2799' => 'cansat', 'CANSAT35G0862' => 'cansat', 'CANSAT35G1704' => 'cansat', 'CANSAT35G1760' => 'cansat', 'CANSAT56G3971' => 'cansat', 'CANSAT56G4116' => 'cansat', 'CANSAT80G1259' => 'cansat', 'CARHR027730' => 'chi', 'CARHR033880' => 'chi', 'CARHR043270' => 'chi', 'CARHR145330' => 'chi', 'CARHR145340' => 'chi', 'CARHR175570' => 'chi', 'CARHR181570' => 'chi', 'CARHR258470' => 'chi', 'CARHR260490' => 'chi', 'CARHR294220' => 'chi', 'Carub.0001s2668' => 'cru', 'Carub.0001s3257' => 'cru', 'Carub.0001s4220' => 'cru', 'Carub.0005s0179' => 'cru', 'Carub.0006s2807' => 'cru', 'Carub.0007s0039' => 'cru', 'Carub.0008s0169' => 'cru', 'Carub.0008s0636' => 'cru', 'Ca_00338_v3' => 'car', 'Ca_00542_v3' => 'car', 'Ca_01844_v3' => 'car', 'Ca_10611_v3' => 'car', 'Ca_13326_v3' => 'car', 'Ca_17944_v3' => 'car', 'Ca_18546_v3' => 'car', 'Ca_24219_v3' => 'car', 'Ca_29972_v3' => 'car', 'CBR_g3681' => 'cbr', 'CBR_g40021' => 'cbr', 'Cc01_g08140' => 'ccan', 'Cc02_g13410' => 'ccan', 'Cc02_g37480' => 'ccan', 'Cc05_g12030' => 'ccan', 'Cc09_g03370' => 'ccan', 'Cc09_g10300' => 'ccan', 'Cc10_g03530' => 'ccan', 'Cc10_g11380' => 'ccan', 'CDE01G0176' => 'cde', 'CDE02G0675' => 'cde', 'CDE02G0942' => 'cde', 'CDE02G1153' => 'cde', 'CDE02G4177' => 'cde', 'CDE04G2117' => 'cde', 'CDE04G2736' => 'cde', 'CDE08G1161' => 'cde', 'CDE09G1238' => 'cde', 'Cfa000467' => 'cfa', 'Cfa000947' => 'cfa', 'Cfa004969' => 'cfa', 'Cfa005284' => 'cfa', 'Cfa008993' => 'cfa', 'Cfa018187' => 'cfa', 'Cfa018454' => 'cfa', 'Cfa020585' => 'cfa', 'Ciclev10000424m.g' => 'ccl', 'Ciclev10003605m.g' => 'ccl', 'Ciclev10007828m.g' => 'ccl', 'Ciclev10014620m.g' => 'ccl', 'Ciclev10015169m.g' => 'ccl', 'Ciclev10018291m.g' => 'ccl', 'Ciclev10028256m.g' => 'ccl', 'Ciclev10033822m.g' => 'ccl', 'CiPaw.05G060300' => 'cil', 'CiPaw.05G085000' => 'cil', 'CiPaw.06G083700' => 'cil', 'CiPaw.06G120300' => 'cil', 'CiPaw.09G060500' => 'cil', 'CiPaw.09G123800' => 'cil', 'CiPaw.11G169700' => 'cil', 'CiPaw.12G118300' => 'cil', 'CiPaw.15G071000' => 'cil', 'CiPaw.15G081900' => 'cil', 'ClCG01G024610' => 'cla', 'ClCG03G006070' => 'cla', 'ClCG05G019250' => 'cla', 'ClCG09G009500' => 'cla', 'ClCG11G008200' => 'cla', 'ClCG11G018080' => 'cla', 'COL.COLO4_17373' => 'col', 'COL.COLO4_22994' => 'col', 'COL.COLO4_26389' => 'col', 'COL.COLO4_27170' => 'col', 'COL.COLO4_31074' => 'col', 'COL.COLO4_31465' => 'col', 'COL.COLO4_36438' => 'col', 'COL.COLO4_36439' => 'col', 'Cpa.g.c38781' => 'cpa', 'Cpa.g.sc128.12' => 'cpa', 'Cpa.g.sc166.7' => 'cpa', 'Cpa.g.sc166.8' => 'cpa', 'Cpa.g.sc20.111' => 'cpa', 'Cpa.g.sc27.31' => 'cpa', 'Cpa.g.sc64.36' => 'cpa', 'Cpa.g.sc64.37' => 'cpa', 'Cpa.g.sc66.49' => 'cpa', 'Cpa.g.sc80.64' => 'cpa', 'CsaV3_1G012320' => 'csa', 'CsaV3_2G008480' => 'csa', 'CsaV3_2G033450' => 'csa', 'CsaV3_3G044830' => 'csa', 'CsaV3_4G033710' => 'csa', 'CsaV3_6G051730' => 'csa', 'CsaV3_7G025350' => 'csa', 'CSS0001067' => 'camsi', 'CSS0005996' => 'camsi', 'CSS0006590' => 'camsi', 'CSS0009673' => 'camsi', 'CSS0010201' => 'camsi', 'CSS0010549' => 'camsi', 'CSS0011364' => 'camsi', 'CSS0014473' => 'camsi', 'CSS0014961' => 'camsi', 'CSS0020191' => 'camsi', 'CSS0021165' => 'camsi', 'CSS0022306' => 'camsi', 'CSS0030591' => 'camsi', 'CSS0030696' => 'camsi', 'CSS0032653' => 'camsi', 'CSS0037487' => 'camsi', 'CSS0041102' => 'camsi', 'CSS0041261' => 'camsi', 'CSS0046246' => 'camsi', 'CSS0049256' => 'camsi', 'DCAR_004075' => 'dca', 'DCAR_011538' => 'dca', 'DCAR_019553' => 'dca', 'DCAR_020952' => 'dca', 'DCAR_021739' => 'dca', 'DCAR_027407' => 'dca', 'DCAR_027913' => 'dca', 'DCAR_028066' => 'dca', 'Dinv05899' => 'din', 'Dinv07563' => 'din', 'Dinv08010' => 'din', 'Dinv14125' => 'din', 'Dinv20172' => 'din', 'Dinv30743' => 'din', 'Dinv31229' => 'din', 'Dinv34162' => 'din', 'Dinv36028' => 'din', 'Dinv39368' => 'din', 'Dinv40565' => 'din', 'Dinv41706' => 'din', 'Duzib052G0089' => 'dzi', 'Duzib116G0641' => 'dzi', 'Duzib132G0069' => 'dzi', 'Duzib132G1219' => 'dzi', 'Duzib147G0278' => 'dzi', 'Duzib160G0480' => 'dzi', 'Duzib170G0661' => 'dzi', 'Duzib177G0591' => 'dzi', 'Duzib187G1353' => 'dzi', 'Duzib192G0858' => 'dzi', 'Duzib192G0883' => 'dzi', 'Duzib213G0506' => 'dzi', 'Duzib235G0289' => 'dzi', 'Duzib251G0422' => 'dzi', 'ECA232G3898' => 'eca', 'ECA233G5950' => 'eca', 'ECA234G1699' => 'eca', 'ECA234G2421' => 'eca', 'ECA236G0426' => 'eca', 'ECA236G4331' => 'eca', 'ECA248G2573' => 'eca', 'EL10Ac1g00077' => 'bvu', 'EL10Ac1g01746' => 'bvu', 'EL10Ac2g03464' => 'bvu', 'EL10Ac4g08176' => 'bvu', 'EL10Ac7g17521' => 'bvu', 'EL10Ac8g20386' => 'bvu', 'EL10Ac9g21343' => 'bvu', 'EL10Ac9g22688' => 'bvu', 'Eucgr.B03434' => 'egr', 'Eucgr.D00618' => 'egr', 'Eucgr.E02395' => 'egr', 'Eucgr.F01129' => 'egr', 'Eucgr.F02622' => 'egr', 'Eucgr.F04207' => 'egr', 'FAN01G0570' => 'fan', 'FAN03G3351' => 'fan', 'FAN06G3702' => 'fan', 'FAN07G2149' => 'fan', 'FAN10G3758' => 'fan', 'FAN11G1170' => 'fan', 'FAN11G2050' => 'fan', 'FAN11G2724' => 'fan', 'FAN12G1700' => 'fan', 'FAN12G2028' => 'fan', 'FAN15G1160' => 'fan', 'FAN15G3063' => 'fan', 'FAN16G2540' => 'fan', 'FAN16G3077' => 'fan', 'FAN16G3624' => 'fan', 'FAN17G0221' => 'fan', 'FAN20G2492' => 'fan', 'FAN20G2905' => 'fan', 'FAN21G0548' => 'fan', 'FAN21G1300' => 'fan', 'FAN22G0077' => 'fan', 'FAN22G1315' => 'fan', 'FAN24G1280' => 'fan', 'FAN24G1445' => 'fan', 'FAN24G3527' => 'fan', 'FAN25G0464' => 'fan', 'FAN25G2885' => 'fan', 'FAN25G3270' => 'fan', 'FAN27G1101' => 'fan', 'FAN27G2846' => 'fan', 'FAN27G3524' => 'fan', 'FvH4_2g11770' => 'fve', 'FvH4_2g15630' => 'fve', 'FvH4_3g05570' => 'fve', 'FvH4_3g09110' => 'fve', 'FvH4_3g19940' => 'fve', 'FvH4_4g04821' => 'fve', 'FvH4_4g31480' => 'fve', 'FvH4_7g01740' => 'fve', 'Glyma.05G130400' => 'gma', 'Glyma.05G156400' => 'gma', 'Glyma.07G197000' => 'gma', 'Glyma.08G085151' => 'gma', 'Glyma.08G114500' => 'gma', 'Glyma.08G300400' => 'gma', 'Glyma.10G215800' => 'gma', 'Glyma.12G224400' => 'gma', 'Glyma.13G179300' => 'gma', 'Glyma.13G218151' => 'gma', 'Glyma.13G238800' => 'gma', 'Glyma.13G276900' => 'gma', 'Glyma.14G078200' => 'gma', 'Glyma.15G074500' => 'gma', 'Glyma.15G094100' => 'gma', 'Glyma.17G247200' => 'gma', 'Glyma.18G120100' => 'gma', 'Glyma.20G176000' => 'gma', 'Gohir.A01G063600' => 'ghi', 'Gohir.A01G170301' => 'ghi', 'Gohir.A02G060500' => 'ghi', 'Gohir.A05G133850' => 'ghi', 'Gohir.A05G161400' => 'ghi', 'Gohir.A06G012900' => 'ghi', 'Gohir.A06G035901' => 'ghi', 'Gohir.A06G127100' => 'ghi', 'Gohir.A06G210500' => 'ghi', 'Gohir.A08G008650' => 'ghi', 'Gohir.A09G072700' => 'ghi', 'Gohir.A09G088301' => 'ghi', 'Gohir.A10G040600' => 'ghi', 'Gohir.A12G036300' => 'ghi', 'Gohir.A12G143350' => 'ghi', 'Gohir.A12G165500' => 'ghi', 'Gohir.A13G145700' => 'ghi', 'Gohir.D01G050000' => 'ghi', 'Gohir.D01G051366' => 'ghi', 'Gohir.D01G161350' => 'ghi', 'Gohir.D02G065900' => 'ghi', 'Gohir.D05G164200' => 'ghi', 'Gohir.D05G355500' => 'ghi', 'Gohir.D06G010400' => 'ghi', 'Gohir.D06G111250' => 'ghi', 'Gohir.D06G132000' => 'ghi', 'Gohir.D06G210500' => 'ghi', 'Gohir.D07G165675' => 'ghi', 'Gohir.D08G062240' => 'ghi', 'Gohir.D08G086101' => 'ghi', 'Gohir.D08G138060' => 'ghi', 'Gohir.D09G072300' => 'ghi', 'Gohir.D10G041400' => 'ghi', 'Gohir.D11G191020' => 'ghi', 'Gohir.D11G212066' => 'ghi', 'Gohir.D12G036300' => 'ghi', 'Gohir.D12G168600' => 'ghi', 'Gohir.D13G150600' => 'ghi', 'Gorai.001G057300' => 'gra', 'Gorai.002G069900' => 'gra', 'Gorai.002G200000' => 'gra', 'Gorai.003G067600' => 'gra', 'Gorai.005G074800' => 'gra', 'Gorai.006G087300' => 'gra', 'Gorai.008G037500' => 'gra', 'Gorai.008G181400' => 'gra', 'Gorai.009G169400' => 'gra', 'Gorai.009G387900' => 'gra', 'Gorai.010G013300' => 'gra', 'Gorai.010G153800' => 'gra', 'Gorai.010G255800' => 'gra', 'Gorai.011G043700' => 'gra', 'Gorai.011G198900' => 'gra', 'Gorai.013G168400' => 'gra', 'GSVIVG01005212001' => 'vvi', 'GSVIVG01006163001' => 'vvi', 'GSVIVG01009625001' => 'vvi', 'GSVIVG01014338001' => 'vvi', 'GSVIVG01020005001' => 'vvi', 'GSVIVG01021450001' => 'vvi', 'GSVIVG01023975001' => 'vvi', 'GSVIVG01034490001' => 'vvi', 'HanXRQChr04g0112071' => 'han', 'HanXRQChr05g0131151' => 'han', 'HanXRQChr09g0262371' => 'han', 'HanXRQChr09g0268401' => 'han', 'HanXRQChr10g0279241' => 'han', 'HanXRQChr10g0297961' => 'han', 'HanXRQChr11g0326231' => 'han', 'HanXRQChr11g0328471' => 'han', 'HanXRQChr16g0507941' => 'han', 'HanXRQChr17g0560211' => 'han', 'Haze_02108' => 'cav', 'Haze_02428' => 'cav', 'Haze_05593' => 'cav', 'Haze_06448' => 'cav', 'Haze_09427' => 'cav', 'Haze_12022' => 'cav', 'Haze_17612' => 'cav', 'Haze_17928' => 'cav', 'Hma1.2p1_0032F.1_g019250' => 'hma', 'Hma1.2p1_0163F.1_g072690' => 'hma', 'Hma1.2p1_0265F.1_g106710' => 'hma', 'Hma1.2p1_0286F.1_g113970' => 'hma', 'Hma1.2p1_0363F.1_g136640' => 'hma', 'Hma1.2p1_0584F.1_g183470' => 'hma', 'Hma1.2p1_0885F.1_g232570' => 'hma', 'HPP92_006022' => 'vpl', 'HPP92_007320' => 'vpl', 'HPP92_011521' => 'vpl', 'HPP92_019387' => 'vpl', 'HPP92_024038' => 'vpl', 'Hund05891' => 'sun', 'Hund06450' => 'sun', 'Hund12053' => 'sun', 'Hund16800' => 'sun', 'Hund21222' => 'sun', 'Hund22896' => 'sun', 'Hund23746' => 'sun', 'Hund27083' => 'sun', 'Lalb_Chr02g0141831' => 'lal', 'Lalb_Chr02g0141841' => 'lal', 'Lalb_Chr05g0220411' => 'lal', 'Lalb_Chr06g0162081' => 'lal', 'Lalb_Chr09g0327651' => 'lal', 'Lalb_Chr13g0295051' => 'lal', 'Lalb_Chr15g0086801' => 'lal', 'Lalb_Chr16g0383781' => 'lal', 'Lalb_Chr16g0383791' => 'lal', 'Lalb_Chr18g0055441' => 'lal', 'Lalb_Chr18g0059611' => 'lal', 'Lalb_Chr20g0109661' => 'lal', 'Lalb_Chr20g0109831' => 'lal', 'Lalb_Chr20g0121871' => 'lal', 'Lalb_Chr22g0355361' => 'lal', 'Lalb_Chr25g0286371' => 'lal', 'Lj1A1187G43' => 'lonja', 'Lj1A1205T50' => 'lonja', 'Lj1A800G33' => 'lonja', 'Lj1C1187T7' => 'lonja', 'Lj1C843T11' => 'lonja', 'Lj1g0010940' => 'lja', 'Lj2A288T69' => 'lonja', 'Lj3g0024276' => 'lja', 'Lj4A47T76' => 'lonja', 'Lj4g0005805' => 'lja', 'Lj4g0006097' => 'lja', 'Lj4g0008528' => 'lja', 'Lj4g0024907' => 'lja', 'Lj5g0012472' => 'lja', 'Lj5g0018648' => 'lja', 'Lj6C789G1' => 'lonja', 'Lj6g0004000' => 'lja', 'Lj7A292G67' => 'lonja', 'Lj7A292T64' => 'lonja', 'Lj9A400T58' => 'lonja', 'Lsat_1_v5_gn_1_126181' => 'lsa', 'Lsat_1_v5_gn_4_123041' => 'lsa', 'Lsat_1_v5_gn_4_133620' => 'lsa', 'Lsat_1_v5_gn_4_53221' => 'lsa', 'Lsat_1_v5_gn_4_71961' => 'lsa', 'Lsat_1_v5_gn_7_105241' => 'lsa', 'Lsat_1_v5_gn_7_21361' => 'lsa', 'Lsat_1_v5_gn_7_28860' => 'lsa', 'Lsat_1_v5_gn_7_31260' => 'lsa', 'Lsat_1_v5_gn_8_52801' => 'lsa', 'Manes.02G191400' => 'mes', 'Manes.03G110100' => 'mes', 'Manes.04G071100' => 'mes', 'Manes.05G100500' => 'mes', 'Manes.05G164700' => 'mes', 'Manes.15G087000' => 'mes', 'Manes.15G121500' => 'mes', 'Manes.16G028300' => 'mes', 'Manes.17G046100' => 'mes', 'Manes.17G069800' => 'mes', 'Manes.18G100500' => 'mes', 'Mapoly0002s0109' => 'mpo', 'Mapoly0024s0007' => 'mpo', 'Mapoly0089s0032' => 'mpo', 'MBI04_g42241_MAGBIO' => 'mbi', 'MBI05_g11988_MAGBIO' => 'mbi', 'MBI05_g35452_MAGBIO' => 'mbi', 'MBI07_g30179_MAGBIO' => 'mbi', 'MBI07_g35859_MAGBIO' => 'mbi', 'MBI07_g35860_MAGBIO' => 'mbi', 'MBI07_g37166_MAGBIO' => 'mbi', 'MBI08_g18172_MAGBIO' => 'mbi', 'MBI09_g08441_MAGBIO' => 'mbi', 'MBI13_g01676_MAGBIO' => 'mbi', 'MBI14_g42955_MAGBIO' => 'mbi', 'MBI16_g13161_MAGBIO' => 'mbi', 'MBI17_g27204_MAGBIO' => 'mbi', 'MBI19_g21595_MAGBIO' => 'mbi', 'MD00G1148400' => 'mdo', 'MD02G1301200' => 'mdo', 'MD03G1227800' => 'mdo', 'MD05G1041100' => 'mdo', 'MD05G1124800' => 'mdo', 'MD05G1284000' => 'mdo', 'MD05G1338800' => 'mdo', 'MD05G1338900' => 'mdo', 'MD07G1022800' => 'mdo', 'MD10G1047500' => 'mdo', 'MD10G1127500' => 'mdo', 'MD10G1262300' => 'mdo', 'MD10G1293800' => 'mdo', 'MD16G1074300' => 'mdo', 'Medtr1g021670' => 'mtr', 'Medtr1g096320' => 'mtr', 'Medtr2g013690' => 'mtr', 'Medtr2g019450' => 'mtr', 'Medtr2g085170' => 'mtr', 'Medtr4g088785' => 'mtr', 'Medtr8g055930' => 'mtr', 'Medtr8g085850' => 'mtr', 'MELO3C002605.2' => 'cme', 'MELO3C003891.2' => 'cme', 'MELO3C004012.2' => 'cme', 'MELO3C007134.2' => 'cme', 'MELO3C008118.2' => 'cme', 'MELO3C016700.2' => 'cme', 'MELO3C024127.2' => 'cme', 'MELO3C033361.2' => 'cme', 'MELO3C033362.2' => 'cme', 'Migut.C00430' => 'egut', 'Migut.C01246' => 'egut', 'Migut.E00101' => 'egut', 'Migut.H01486' => 'egut', 'Migut.H01939' => 'egut', 'Migut.K00360' => 'egut', 'Migut.M00910' => 'egut', 'Migut.M01139' => 'egut', 'Migut.N02677' => 'egut', 'MSTRG.13252' => 'ama', 'MSTRG.14701' => 'ama', 'MSTRG.1521' => 'ama', 'MSTRG.15884' => 'ama', 'MSTRG.16242' => 'ama', 'MSTRG.22285' => 'ama', 'MSTRG.22444' => 'ama', 'MSTRG.2349' => 'ama', 'MSTRG.26308' => 'ama', 'MSTRG.28296' => 'ama', 'MSTRG.9895' => 'ama', 'Nitab4.5_0000110g0060' => 'nta', 'Nitab4.5_0000420g0130' => 'nta', 'Nitab4.5_0000422g0030' => 'nta', 'Nitab4.5_0000560g0180' => 'nta', 'Nitab4.5_0000703g0100' => 'nta', 'Nitab4.5_0000786g0200' => 'nta', 'Nitab4.5_0001336g0020' => 'nta', 'Nitab4.5_0001796g0030' => 'nta', 'Nitab4.5_0003348g0060' => 'nta', 'Nitab4.5_0003698g0040' => 'nta', 'Nitab4.5_0003942g0090' => 'nta', 'Nitab4.5_0004775g0070' => 'nta', 'Nitab4.5_0004864g0030' => 'nta', 'Nitab4.5_0005615g0020' => 'nta', 'Nitab4.5_0009288g0030' => 'nta', 'Nitab4.5_0009341g0010' => 'nta', 'Nitab4.5_0009535g0010' => 'nta', 'Nn1g03995' => 'nnu', 'Nn1g04100' => 'nnu', 'Nn1g06530' => 'nnu', 'Nn3g16404' => 'nnu', 'Nn3g17212' => 'nnu', 'Nn3g20776' => 'nnu', 'Nn3g21923' => 'nnu', 'Nn5g27737' => 'nnu', 'Nn5g29461' => 'nnu', 'Nn7g38355' => 'nnu', 'Nn8g39873' => 'nnu', 'Oeu000548.2' => 'oeu', 'Oeu004672.1' => 'oeu', 'Oeu015605.2' => 'oeu', 'Oeu016092.1' => 'oeu', 'Oeu017879.3' => 'oeu', 'Oeu024910.1' => 'oeu', 'Oeu028965.1' => 'oeu', 'Oeu031269.1' => 'oeu', 'Oeu031270.1' => 'oeu', 'Oeu032535.1' => 'oeu', 'Oeu034151.1' => 'oeu', 'Oeu034152.1' => 'oeu', 'Oeu034588.2' => 'oeu', 'Oeu050846.1' => 'oeu', 'Oeu050849.2' => 'oeu', 'Oeu051063.2' => 'oeu', 'Oeu052368.1' => 'oeu', 'Oeu052370.1' => 'oeu', 'Os01g0210400' => 'osa', 'Os01g0304300' => 'osa', 'Os01g0749100' => 'osa', 'Os02g0745800' => 'osa', 'Os03g0769050' => 'osa', 'Os05g0531500' => 'osa', 'Os06g0724300' => 'osa', 'Os11g0198100' => 'osa', 'Peaxi162Scf00069g01425' => 'pax', 'Peaxi162Scf00280g00811' => 'pax', 'Peaxi162Scf00310g00615' => 'pax', 'Peaxi162Scf00362g00542' => 'pax', 'Peaxi162Scf00461g00310' => 'pax', 'Peaxi162Scf00530g00118' => 'pax', 'Peaxi162Scf00541g00057' => 'pax', 'Peaxi162Scf00661g00017' => 'pax', 'Peaxi162Scf00926g00027' => 'pax', 'Peaxi162Scf01064g00263' => 'pax', 'Peaxi162Scf01211g00135' => 'pax', 'PGR004G2336' => 'pgr', 'PGR042G0327' => 'pgr', 'PGR042G1957' => 'pgr', 'PGR042G2003' => 'pgr', 'PGR042G3929' => 'pgr', 'PGR083G1137' => 'pgr', 'PGR083G1364' => 'pgr', 'PGSC0003DMG400003381' => 'stu', 'PGSC0003DMG400003417' => 'stu', 'PGSC0003DMG400008981' => 'stu', 'PGSC0003DMG400012417' => 'stu', 'PGSC0003DMG400012823' => 'stu', 'PGSC0003DMG400016885' => 'stu', 'PGSC0003DMG400022812' => 'stu', 'PGSC0003DMG400029726' => 'stu', 'PGSC0003DMG401009243' => 'stu', 'PGSC0003DMG401031505' => 'stu', 'PGSC0003DMG402031505' => 'stu', 'Phvul.001G017600' => 'pvu', 'Phvul.002G193500' => 'pvu', 'Phvul.002G228900' => 'pvu', 'Phvul.002G236800' => 'pvu', 'Phvul.003G049500' => 'pvu', 'Phvul.005G072000' => 'pvu', 'Phvul.006G164800' => 'pvu', 'Phvul.006G185100' => 'pvu', 'Phvul.007G090000' => 'pvu', 'Potri.001G399800' => 'ptr', 'Potri.002G149900' => 'ptr', 'Potri.004G044100' => 'ptr', 'Potri.004G177600' => 'ptr', 'Potri.009G138000' => 'ptr', 'Potri.010G094000' => 'ptr', 'Potri.011G053000' => 'ptr', 'Potri.011G119300' => 'ptr', 'Potri.013G113700' => 'ptr', 'Potri.018G107800' => 'ptr', 'Potri.019G084100' => 'ptr', 'Pp3c14_23720' => 'ppa', 'Pp3c16_6340' => 'ppa', 'Pp3c23_13420' => 'ppa', 'Pp3c24_2740' => 'ppa', 'Pp3c25_860' => 'ppa', 'Pp3c8_21750' => 'ppa', 'Prupe.1G273000' => 'ppe', 'Prupe.1G273700' => 'ppe', 'Prupe.1G274100' => 'ppe', 'Prupe.2G023300' => 'ppe', 'Prupe.4G048000' => 'ppe', 'Prupe.4G080400' => 'ppe', 'Prupe.4G181200' => 'ppe', 'Prupe.8G056900' => 'ppe', 'Prupe.8G168700' => 'ppe', 'Psat1g189080' => 'psa', 'Psat1g204760' => 'psa', 'Psat4g175560' => 'psa', 'Psat4g177720' => 'psa', 'Psat5g244240' => 'psa', 'Psat6g010720' => 'psa', 'Psat6g187200' => 'psa', 'Psat7g072040' => 'psa', 'PSO017G3501' => 'pso', 'PSO063G2148' => 'pso', 'PSO063G5608' => 'pso', 'PSO210G6392' => 'pso', 'PSO541G2319' => 'pso', 'PSO541G2836' => 'pso', 'PSO541G4012' => 'pso', 'PSO541G6253' => 'pso', 'PSO675G0580' => 'pso', 'PSO675G0856' => 'pso', 'PSO675G5635' => 'pso', 'PSO675G9157' => 'pso', 'PSO832G1660' => 'pso', 'PSO832G1969' => 'pso', 'QL02p007186' => 'qlo', 'QL02p033904' => 'qlo', 'QL03p064391' => 'qlo', 'QL05p040593' => 'qlo', 'QL05p058242' => 'qlo', 'QL08p021825' => 'qlo', 'QL11p004981' => 'qlo', 'RcHm_v2.0_Chr1g0318301' => 'rch', 'RcHm_v2.0_Chr4g0418501' => 'rch', 'RcHm_v2.0_Chr4g0439971' => 'rch', 'RcHm_v2.0_Chr5g0008541' => 'rch', 'RcHm_v2.0_Chr5g0014101' => 'rch', 'RcHm_v2.0_Chr5g0014131' => 'rch', 'RcHm_v2.0_Chr5g0033621' => 'rch', 'RcHm_v2.0_Chr6g0272041' => 'rch', 'RcHm_v2.0_Chr6g0278831' => 'rch', 'Rhsim02G0130400' => 'rsi', 'Rhsim02G0171100' => 'rsi', 'Rhsim05G0053000' => 'rsi', 'Rhsim05G0053100' => 'rsi', 'Rhsim06G0096500' => 'rsi', 'Rhsim06G0096600' => 'rsi', 'Rhsim06G0199100' => 'rsi', 'Rhsim12G0062300' => 'rsi', 'Rhsim12G0062800' => 'rsi', 'Sabra02G0118600' => 'sbr', 'Sabra04G0027300' => 'sbr', 'Sabra04G0119500' => 'sbr', 'Sabra08G0112500' => 'sbr', 'Sabra11G0036800' => 'sbr', 'Sabra11G0103800' => 'sbr', 'Sabra13G0096300' => 'sbr', 'Sabra16G0262300' => 'sbr', 'Sabra18G0091700' => 'sbr', 'Sabra19G0095400' => 'sbr', 'SalBow6G3080' => 'sbo', 'SalBow7G1157' => 'sbo', 'SalBow7G2123' => 'sbo', 'SalBow7G2285' => 'sbo', 'SalBow7G3537' => 'sbo', 'SalBow8G2947' => 'sbo', 'SalBow8G4463' => 'sbo', 'SalBow8G5466' => 'sbo', 'Sc01g0001750' => 'sci', 'Sc02g0006640' => 'sci', 'Sc02g0006670' => 'sci', 'Sc04g0008220' => 'sci', 'Sc05g0006190' => 'sci', 'Sc08g0002760' => 'sci', 'Sc17g0006170' => 'sci', 'Sc22g0002050' => 'sci', 'Sc23g0001190' => 'sci', 'Sc24g0000980' => 'sci', 'Sed0006245' => 'sed', 'Sed0007543' => 'sed', 'Sed0009411' => 'sed', 'Sed0010765' => 'sed', 'Sed0012944' => 'sed', 'Sed0014682' => 'sed', 'Sed0016174' => 'sed', 'Sed0016796' => 'sed', 'Sed0020317' => 'sed', 'Sed0021467' => 'sed', 'SEGI_01316' => 'sgi', 'SEGI_03374' => 'sgi', 'SEGI_16265' => 'sgi', 'SEGI_18569' => 'sgi', 'SEGI_20351' => 'sgi', 'SEGI_26395' => 'sgi', 'SEGI_29469' => 'sgi', 'SEGI_34771' => 'sgi', 'SEGI_36769' => 'sgi', 'SEGI_37139' => 'sgi', 'SGA_v2.0_scaffold100G29687' => 'sas', 'SGA_v2.0_scaffold118G32472' => 'sas', 'SGA_v2.0_scaffold14G07051' => 'sas', 'SGA_v2.0_scaffold183G39845' => 'sas', 'SGA_v2.0_scaffold1G00174' => 'sas', 'SGA_v2.0_scaffold22G09714' => 'sas', 'SGA_v2.0_scaffold333G48992' => 'sas', 'SGA_v2.0_scaffold46G17491' => 'sas', 'SGA_v2.0_scaffold49G18294' => 'sas', 'SGA_v2.0_scaffold63G21658' => 'sas', 'SHI01741' => 'shi', 'SHI05771' => 'shi', 'SHI18077' => 'shi', 'SHI20525' => 'shi', 'SHI20527' => 'shi', 'SHI20528' => 'shi', 'SMO172G0185' => 'smo', 'SMO198G0020' => 'smo', 'SMO351G0006' => 'smo', 'SMO356G0118' => 'smo', 'SMO358G0296' => 'smo', 'SMO367G0079' => 'smo', 'SMO367G1277' => 'smo', 'Solyc01g014220.3' => 'sly', 'Solyc01g111770.2' => 'sly', 'Solyc02g078180.3' => 'sly', 'Solyc03g006430.3' => 'sly', 'Solyc03g006456.1' => 'sly', 'Solyc03g079860.2' => 'sly', 'Solyc04g079770.3' => 'sly', 'Solyc05g007430.4' => 'sly', 'Solyc07g063150.3' => 'sly', 'Solyc08g016620.3' => 'sly', 'Solyc09g057590.3' => 'sly', 'Solyc09g057600.1' => 'sly', 'Solyc10g009050.3' => 'sly', 'Solyc11g017420.2' => 'sly', 'Sopen01g053810' => 'spe', 'Sopen02g023040' => 'spe', 'Sopen03g002440' => 'spe', 'Sopen04g033350' => 'spe', 'Sopen05g003310' => 'spe', 'Sopen07g004050' => 'spe', 'Sopen07g031340' => 'spe', 'Sopen08g006990' => 'spe', 'Sopen10g004830' => 'spe', 'Sopen11g009370' => 'spe', 'Sp1g24450' => 'spa', 'Sp1g29670' => 'spa', 'Sp1g39600' => 'spa', 'Sp2g11080' => 'spa', 'Sp2g13970' => 'spa', 'Sp4g16130' => 'spa', 'Sp6g13080' => 'spa', 'Sp7g37270' => 'spa', 'TAR371G0065' => 'tar', 'TAR376G0340' => 'tar', 'TAR376G0435' => 'tar', 'TAR381G0002' => 'tar', 'TAR381G1236' => 'tar', 'TAR624G0055' => 'tar', 'TAR624G0324' => 'tar', 'TAR624G0696' => 'tar', 'TAR624G0906' => 'tar', 'TAR625G0107' => 'tar', 'TAR626G0015' => 'tar', 'TAR626G1356' => 'tar', 'TAR627G0888' => 'tar', 'TAR628G0399' => 'tar', 'TAR628G1327' => 'tar', 'TAR629G2831' => 'tar', 'TAR629G2874' => 'tar', 'TAR633G1432' => 'tar', 'TAR633G2771' => 'tar', 'THA.LOC104803394' => 'tha', 'THA.LOC104805153' => 'tha', 'THA.LOC104806784' => 'tha', 'THA.LOC104810473' => 'tha', 'THA.LOC104813100' => 'tha', 'THA.LOC104814215' => 'tha', 'THA.LOC104815554' => 'tha', 'THA.LOC104820544' => 'tha', 'THA.LOC104824754' => 'tha', 'THA.LOC104827717' => 'tha', 'Thecc.02G031400' => 'tca', 'Thecc.02G055900' => 'tca', 'Thecc.02G350800' => 'tca', 'Thecc.06G150900' => 'tca', 'Thecc.06G186600' => 'tca', 'Thecc.07G089600' => 'tca', 'Thecc.08G020400' => 'tca', 'Thecc.08G182100' => 'tca', 'Thhalv10000873m.g' => 'esa', 'Thhalv10004185m.g' => 'esa', 'Thhalv10006981m.g' => 'esa', 'Thhalv10007204m.g' => 'esa', 'Thhalv10011374m.g' => 'esa', 'Thhalv10013482m.g' => 'esa', 'Thhalv10017801m.g' => 'esa', 'Thhalv10024983m.g' => 'esa', 'TPR.G12072' => 'tpr', 'TPR.G15769' => 'tpr', 'TPR.G16504' => 'tpr', 'TPR.G16506' => 'tpr', 'TPR.G24345' => 'tpr', 'TPR.G26666' => 'tpr', 'TPR.G27320' => 'tpr', 'TPR.G31819' => 'tpr', 'TPR.G38879' => 'tpr', 'TPR.G39015' => 'tpr', 'TPR.G8819' => 'tpr', 'TWI09G0924' => 'twi', 'TWI12G0811' => 'twi', 'TWI12G1294' => 'twi', 'TWI31G0150' => 'twi', 'TWI36G1262' => 'twi', 'TWI38G1287' => 'twi', 'TWI38G1633' => 'twi', 'TWI38G1982' => 'twi', 'TWI39G0116' => 'twi', 'TWI60G1011' => 'twi', 'TWI63G0171' => 'twi', 'TWI73G0839' => 'twi', 'TWI79G1511' => 'twi', 'unitig_0.g915' => 'ugi', 'unitig_0.g916' => 'ugi', 'unitig_21.g20219' => 'ugi', 'unitig_21.g20416' => 'ugi', 'unitig_578.g16132' => 'ugi', 'unitig_578.g16718' => 'ugi', 'unitig_62.g23481' => 'ugi', 'unitig_744.g24535' => 'ugi', 'unitig_749.g13525' => 'ugi', 'vmacro01248' => 'vma', 'vmacro02290' => 'vma', 'vmacro10946' => 'vma', 'vmacro11865' => 'vma', 'vmacro12493' => 'vma', 'vmacro17322' => 'vma', 'vmacro21599' => 'vma', 'vmacro23041' => 'vma', 'VMungo0251G0004' => 'vmu', 'VMungo0251G2639' => 'vmu', 'VMungo0251G2967' => 'vmu', 'VMungo0540G0864' => 'vmu', 'VMungo0540G1569' => 'vmu', 'VMungo0647G0317' => 'vmu', 'VMungo0720G1373' => 'vmu', 'VMungo0720G1508' => 'vmu', 'VMungo1080G0485' => 'vmu', 'VMungo1215G3177' => 'vmu', 'Zm00001eb112600' => 'zma', 'Zm00001eb120220' => 'zma', 'Zm00001eb153240' => 'zma', 'Zm00001eb168880' => 'zma', 'Zm00001eb213920' => 'zma', 'Zm00001eb228280' => 'zma', 'Zm00001eb254580' => 'zma', 'Zm00001eb272180' => 'zma', 'Zm00001eb293190' => 'zma', 'Zm00001eb322930' => 'zma', 'Zm00001eb353360' => 'zma', 'Zm00001eb353390' => 'zma', 'Zm00001eb353430' => 'zma', 'Zm00001eb353440' => 'zma', 'Zm00001eb353780' => 'zma' ), 'gf_id' => 'HOM05D000499', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000499' ), 'data_identifier' => 'HOM05D000499', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000499', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1066', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p29780' => 'bna', 'A02p33180' => 'bna', 'A03p16470' => 'bna', 'A03p66010' => 'bna', 'A04p25970' => 'bna', 'A06p01270' => 'bna', 'A06p46080' => 'bna', 'A07p11400' => 'bna', 'A08p01840' => 'bna', 'A08p08230' => 'bna', 'A08p25740' => 'bna', 'A09p32070' => 'bna', 'A09p37830' => 'bna', 'A09p42840' => 'bna', 'A09p42850' => 'bna', 'Aa31LG10G2060' => 'aar', 'Aa31LG2G7410' => 'aar', 'Aa31LG6G10200' => 'aar', 'Aa31LG6G16680' => 'aar', 'Aa31LG6G8470' => 'aar', 'Aa31LG9G12730' => 'aar', 'Aa31LG9G13680' => 'aar', 'Aa31LG9G14920' => 'aar', 'Aa31LG9G6650' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4977' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5467' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3254' => 'aag', 'Actinidia02578' => 'ach', 'Actinidia07693' => 'ach', 'Actinidia08413' => 'ach', 'Actinidia08414' => 'ach', 'Actinidia15289' => 'ach', 'Actinidia19871' => 'ach', 'Actinidia21475' => 'ach', 'Actinidia22576' => 'ach', 'Actinidia28327' => 'ach', 'Actinidia32491' => 'ach', 'Actinidia39463' => 'ach', 'Actinidia39571' => 'ach', 'Ah.01g013750' => 'amhyb', 'Ah.01g023210' => 'amhyb', 'Ah.04g164850' => 'amhyb', 'Ah.05g178060' => 'amhyb', 'Ah.07g204270' => 'amhyb', 'Ah.07g208480' => 'amhyb', 'Ah.09g237410' => 'amhyb', 'Ah.14g089460' => 'amhyb', 'AL1G41790' => 'aly', 'AL1G49050' => 'aly', 'AL1G53810' => 'aly', 'AL1G61400' => 'aly', 'AL4G18580' => 'aly', 'AL5G12510' => 'aly', 'AL5G12540' => 'aly', 'AL6G43230' => 'aly', 'AL7G10370' => 'aly', 'AL7G19250' => 'aly', 'AL8G12240' => 'aly', 'AL8G18540' => 'aly', 'Aqoxy1G02409' => 'aox', 'Aqoxy2G03993' => 'aox', 'Aqoxy3G03357' => 'aox', 'Aqoxy4G00785' => 'aox', 'Aqoxy5G02598' => 'aox', 'Aqoxy6G00132' => 'aox', 'Aqoxy7G01776' => 'aox', 'Aqoxy7G02316' => 'aox', 'Aqoxy7G03973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.12AFKW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B8730' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27IQR1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3F75VG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3RE0GA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41TCQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.527VTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FIR39' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5W8UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DA38EV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ63HS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H1I32C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HC27T5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4M8AP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7N3CZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9UVDZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LS1NQA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT1D4B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SKC4TM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCFV76' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF9Q1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQWD9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1ZM88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WE07RT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YCK7VH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJE6Q6' => 'arhy', 'AT1G28240' => 'ath', 'AT1G34550' => 'ath', 'AT1G53040' => 'ath', 'AT2G02910' => 'ath', 'AT4G09630' => 'ath', 'AT4G38500' => 'ath', 'AT5G42660' => 'ath', 'AT5G46220' => 'ath', 'ATR0152G026' => 'atr', 'ATR0564G343' => 'atr', 'ATR0706G151' => 'atr', 'ATR0733G207' => 'atr', 'ATR0751G234' => 'atr', 'ATR0807G048' => 'atr', 'ATR1091G084' => 'atr', 'Atru.chr10.1229' => 'acertr', 'Atru.chr10.1230' => 'acertr', 'Atru.chr10.1874' => 'acertr', 'Atru.chr11.1808' => 'acertr', 'Atru.chr13.1795' => 'acertr', 'Atru.chr13.570' => 'acertr', 'Atru.chr2.2608' => 'acertr', 'Atru.chr2.2609' => 'acertr', 'Atru.chr5.3428' => 'acertr', 'Atru.chr8.1171' => 'acertr', 'AUR62004651' => 'cqu', 'AUR62008675' => 'cqu', 'AUR62010014' => 'cqu', 'AUR62013004' => 'cqu', 'AUR62014825' => 'cqu', 'AUR62015015' => 'cqu', 'AUR62015151' => 'cqu', 'AUR62017020' => 'cqu', 'AUR62019422' => 'cqu', 'AUR62023570' => 'cqu', 'AUR62025571' => 'cqu', 'AUR62029098' => 'cqu', 'AUR62033863' => 'cqu', 'AUR62034296' => 'cqu', 'AUR62040075' => 'cqu', 'BcaB02g07334' => 'bca', 'BcaB02g10575' => 'bca', 'BcaB03g12119' => 'bca', 'BcaB03g12120' => 'bca', 'BcaB03g13945' => 'bca', 'BcaB04g17123' => 'bca', 'BcaB04g17867' => 'bca', 'BcaB04g19839' => 'bca', 'BcaB07g30317' => 'bca', 'BcaB07g32432' => 'bca', 'BcaB07g33362' => 'bca', 'BcaB08g36611' => 'bca', 'BcaC01g00028' => 'bca', 'BcaC01g01356' => 'bca', 'BcaC01g02034' => 'bca', 'BcaC01g06051' => 'bca', 'BcaC03g16839' => 'bca', 'BcaC03g17176' => 'bca', 'BcaC05g26829' => 'bca', 'BcaC06g31490' => 'bca', 'BcaC06g35344' => 'bca', 'BcaC06g36570' => 'bca', 'BcaC07g37537' => 'bca', 'BcaC08g43491' => 'bca', 'BcaC08g43773' => 'bca', 'BcaNung00234' => 'bca', 'BcaNung01982' => 'bca', 'BcaNung03707' => 'bca', 'BcaNung06454' => 'bca', 'BolC2t10762H' => 'bol', 'BolC2t11191H' => 'bol', 'BolC3t14322H' => 'bol', 'BolC3t19747H' => 'bol', 'BolC3t21425H' => 'bol', 'BolC4t27800H' => 'bol', 'BolC5t31423H' => 'bol', 'BolC6t35951H' => 'bol', 'BolC6t36282H' => 'bol', 'BolC7t40678H' => 'bol', 'BolC7t40679H' => 'bol', 'BolC7t42222H' => 'bol', 'BolC7t43492H' => 'bol', 'BolC7t46785H' => 'bol', 'BolC8t47853H' => 'bol', 'BolC9t56805H' => 'bol', 'BraA02t08000Z' => 'bra', 'BraA02t08341Z' => 'bra', 'BraA03t10936Z' => 'bra', 'BraA03t15657Z' => 'bra', 'BraA04t18100Z' => 'bra', 'BraA05t20523Z' => 'bra', 'BraA06t23353Z' => 'bra', 'BraA06t27473Z' => 'bra', 'BraA06t27769Z' => 'bra', 'BraA07t28928Z' => 'bra', 'BraA08t32236Z' => 'bra', 'BraA08t32841Z' => 'bra', 'BraA08t34524Z' => 'bra', 'BraA09t38742Z' => 'bra', 'BraA09t39295Z' => 'bra', 'C02p47180' => 'bna', 'C02p50990' => 'bna', 'C03p19360' => 'bna', 'C03p74950' => 'bna', 'C03p91000' => 'bna', 'C04p63260' => 'bna', 'C05p27050' => 'bna', 'C06p08750' => 'bna', 'C06p11490' => 'bna', 'C07p02820' => 'bna', 'C07p17180' => 'bna', 'C07p29440' => 'bna', 'C07p63730' => 'bna', 'C09p39260' => 'bna', 'CAN.G1164.34' => 'can', 'CAN.G1164.39' => 'can', 'CAN.G1530.3' => 'can', 'CAN.G162.61' => 'can', 'CAN.G176.6' => 'can', 'CAN.G289.49' => 'can', 'CAN.G370.21' => 'can', 'CAN.G370.22' => 'can', 'CAN.G371.117' => 'can', 'CAN.G58.37' => 'can', 'CAN.G588.98' => 'can', 'CANSAT21G2266' => 'cansat', 'CANSAT25G2799' => 'cansat', 'CANSAT35G0862' => 'cansat', 'CANSAT35G1704' => 'cansat', 'CANSAT35G1760' => 'cansat', 'CANSAT56G3971' => 'cansat', 'CANSAT56G4116' => 'cansat', 'CANSAT80G1259' => 'cansat', 'CARHR027730' => 'chi', 'CARHR033880' => 'chi', 'CARHR043270' => 'chi', 'CARHR145330' => 'chi', 'CARHR145340' => 'chi', 'CARHR175570' => 'chi', 'CARHR181570' => 'chi', 'CARHR258470' => 'chi', 'CARHR260490' => 'chi', 'CARHR294220' => 'chi', 'Carub.0001s2668' => 'cru', 'Carub.0001s3257' => 'cru', 'Carub.0001s4220' => 'cru', 'Carub.0005s0179' => 'cru', 'Carub.0006s2807' => 'cru', 'Carub.0007s0039' => 'cru', 'Carub.0008s0169' => 'cru', 'Carub.0008s0636' => 'cru', 'Ca_00338_v3' => 'car', 'Ca_00542_v3' => 'car', 'Ca_01844_v3' => 'car', 'Ca_10611_v3' => 'car', 'Ca_13326_v3' => 'car', 'Ca_17944_v3' => 'car', 'Ca_18546_v3' => 'car', 'Ca_24219_v3' => 'car', 'Ca_29972_v3' => 'car', 'CBR_g3681' => 'cbr', 'CBR_g40021' => 'cbr', 'Cc01_g08140' => 'ccan', 'Cc02_g13410' => 'ccan', 'Cc02_g37480' => 'ccan', 'Cc05_g12030' => 'ccan', 'Cc09_g03370' => 'ccan', 'Cc09_g10300' => 'ccan', 'Cc10_g03530' => 'ccan', 'Cc10_g11380' => 'ccan', 'CDE01G0176' => 'cde', 'CDE02G0675' => 'cde', 'CDE02G0942' => 'cde', 'CDE02G1153' => 'cde', 'CDE02G4177' => 'cde', 'CDE04G2117' => 'cde', 'CDE04G2736' => 'cde', 'CDE08G1161' => 'cde', 'CDE09G1238' => 'cde', 'Cfa000467' => 'cfa', 'Cfa000947' => 'cfa', 'Cfa004969' => 'cfa', 'Cfa005284' => 'cfa', 'Cfa008993' => 'cfa', 'Cfa018187' => 'cfa', 'Cfa018454' => 'cfa', 'Cfa020585' => 'cfa', 'Ciclev10000424m.g' => 'ccl', 'Ciclev10003605m.g' => 'ccl', 'Ciclev10007828m.g' => 'ccl', 'Ciclev10014620m.g' => 'ccl', 'Ciclev10015169m.g' => 'ccl', 'Ciclev10018291m.g' => 'ccl', 'Ciclev10028256m.g' => 'ccl', 'Ciclev10033822m.g' => 'ccl', 'CiPaw.05G060300' => 'cil', 'CiPaw.05G085000' => 'cil', 'CiPaw.06G083700' => 'cil', 'CiPaw.06G120300' => 'cil', 'CiPaw.09G060500' => 'cil', 'CiPaw.09G123800' => 'cil', 'CiPaw.11G169700' => 'cil', 'CiPaw.12G118300' => 'cil', 'CiPaw.15G071000' => 'cil', 'CiPaw.15G081900' => 'cil', 'ClCG01G024610' => 'cla', 'ClCG03G006070' => 'cla', 'ClCG05G019250' => 'cla', 'ClCG09G009500' => 'cla', 'ClCG11G008200' => 'cla', 'ClCG11G018080' => 'cla', 'COL.COLO4_17373' => 'col', 'COL.COLO4_22994' => 'col', 'COL.COLO4_26389' => 'col', 'COL.COLO4_27170' => 'col', 'COL.COLO4_31074' => 'col', 'COL.COLO4_31465' => 'col', 'COL.COLO4_36438' => 'col', 'COL.COLO4_36439' => 'col', 'Cpa.g.c38781' => 'cpa', 'Cpa.g.sc128.12' => 'cpa', 'Cpa.g.sc166.7' => 'cpa', 'Cpa.g.sc166.8' => 'cpa', 'Cpa.g.sc20.111' => 'cpa', 'Cpa.g.sc27.31' => 'cpa', 'Cpa.g.sc64.36' => 'cpa', 'Cpa.g.sc64.37' => 'cpa', 'Cpa.g.sc66.49' => 'cpa', 'Cpa.g.sc80.64' => 'cpa', 'CsaV3_1G012320' => 'csa', 'CsaV3_2G008480' => 'csa', 'CsaV3_2G033450' => 'csa', 'CsaV3_3G044830' => 'csa', 'CsaV3_4G033710' => 'csa', 'CsaV3_6G051730' => 'csa', 'CsaV3_7G025350' => 'csa', 'CSS0001067' => 'camsi', 'CSS0005996' => 'camsi', 'CSS0006590' => 'camsi', 'CSS0009673' => 'camsi', 'CSS0010201' => 'camsi', 'CSS0010549' => 'camsi', 'CSS0011364' => 'camsi', 'CSS0014473' => 'camsi', 'CSS0014961' => 'camsi', 'CSS0020191' => 'camsi', 'CSS0021165' => 'camsi', 'CSS0022306' => 'camsi', 'CSS0030591' => 'camsi', 'CSS0030696' => 'camsi', 'CSS0032653' => 'camsi', 'CSS0037487' => 'camsi', 'CSS0041102' => 'camsi', 'CSS0041261' => 'camsi', 'CSS0046246' => 'camsi', 'CSS0049256' => 'camsi', 'DCAR_004075' => 'dca', 'DCAR_011538' => 'dca', 'DCAR_019553' => 'dca', 'DCAR_020952' => 'dca', 'DCAR_021739' => 'dca', 'DCAR_027407' => 'dca', 'DCAR_027913' => 'dca', 'DCAR_028066' => 'dca', 'Dinv05899' => 'din', 'Dinv07563' => 'din', 'Dinv08010' => 'din', 'Dinv14125' => 'din', 'Dinv20172' => 'din', 'Dinv30743' => 'din', 'Dinv31229' => 'din', 'Dinv34162' => 'din', 'Dinv36028' => 'din', 'Dinv39368' => 'din', 'Dinv40565' => 'din', 'Dinv41706' => 'din', 'Duzib052G0089' => 'dzi', 'Duzib116G0641' => 'dzi', 'Duzib132G0069' => 'dzi', 'Duzib132G1219' => 'dzi', 'Duzib147G0278' => 'dzi', 'Duzib160G0480' => 'dzi', 'Duzib170G0661' => 'dzi', 'Duzib177G0591' => 'dzi', 'Duzib187G1353' => 'dzi', 'Duzib192G0858' => 'dzi', 'Duzib192G0883' => 'dzi', 'Duzib213G0506' => 'dzi', 'Duzib235G0289' => 'dzi', 'Duzib251G0422' => 'dzi', 'ECA232G3898' => 'eca', 'ECA233G5950' => 'eca', 'ECA234G1699' => 'eca', 'ECA234G2421' => 'eca', 'ECA236G0426' => 'eca', 'ECA236G4331' => 'eca', 'ECA248G2573' => 'eca', 'EL10Ac1g00077' => 'bvu', 'EL10Ac1g01746' => 'bvu', 'EL10Ac2g03464' => 'bvu', 'EL10Ac4g08176' => 'bvu', 'EL10Ac7g17521' => 'bvu', 'EL10Ac8g20386' => 'bvu', 'EL10Ac9g21343' => 'bvu', 'EL10Ac9g22688' => 'bvu', 'Eucgr.B03434' => 'egr', 'Eucgr.D00618' => 'egr', 'Eucgr.E02395' => 'egr', 'Eucgr.F01129' => 'egr', 'Eucgr.F02622' => 'egr', 'Eucgr.F04207' => 'egr', 'FAN01G0570' => 'fan', 'FAN03G3351' => 'fan', 'FAN06G3702' => 'fan', 'FAN07G2149' => 'fan', 'FAN10G3758' => 'fan', 'FAN11G1170' => 'fan', 'FAN11G2050' => 'fan', 'FAN11G2724' => 'fan', 'FAN12G1700' => 'fan', 'FAN12G2028' => 'fan', 'FAN15G1160' => 'fan', 'FAN15G3063' => 'fan', 'FAN16G2540' => 'fan', 'FAN16G3077' => 'fan', 'FAN16G3624' => 'fan', 'FAN17G0221' => 'fan', 'FAN20G2492' => 'fan', 'FAN20G2905' => 'fan', 'FAN21G0548' => 'fan', 'FAN21G1300' => 'fan', 'FAN22G0077' => 'fan', 'FAN22G1315' => 'fan', 'FAN24G1280' => 'fan', 'FAN24G1445' => 'fan', 'FAN24G3527' => 'fan', 'FAN25G0464' => 'fan', 'FAN25G2885' => 'fan', 'FAN25G3270' => 'fan', 'FAN27G1101' => 'fan', 'FAN27G2846' => 'fan', 'FAN27G3524' => 'fan', 'FvH4_2g11770' => 'fve', 'FvH4_2g15630' => 'fve', 'FvH4_3g05570' => 'fve', 'FvH4_3g09110' => 'fve', 'FvH4_3g19940' => 'fve', 'FvH4_4g04821' => 'fve', 'FvH4_4g31480' => 'fve', 'FvH4_7g01740' => 'fve', 'Glyma.05G130400' => 'gma', 'Glyma.05G156400' => 'gma', 'Glyma.07G197000' => 'gma', 'Glyma.08G085151' => 'gma', 'Glyma.08G114500' => 'gma', 'Glyma.08G300400' => 'gma', 'Glyma.10G215800' => 'gma', 'Glyma.12G224400' => 'gma', 'Glyma.13G179300' => 'gma', 'Glyma.13G218151' => 'gma', 'Glyma.13G238800' => 'gma', 'Glyma.13G276900' => 'gma', 'Glyma.14G078200' => 'gma', 'Glyma.15G074500' => 'gma', 'Glyma.15G094100' => 'gma', 'Glyma.17G247200' => 'gma', 'Glyma.18G120100' => 'gma', 'Glyma.20G176000' => 'gma', 'Gohir.A01G063600' => 'ghi', 'Gohir.A01G170301' => 'ghi', 'Gohir.A02G060500' => 'ghi', 'Gohir.A05G133850' => 'ghi', 'Gohir.A05G161400' => 'ghi', 'Gohir.A06G012900' => 'ghi', 'Gohir.A06G035901' => 'ghi', 'Gohir.A06G127100' => 'ghi', 'Gohir.A06G210500' => 'ghi', 'Gohir.A08G008650' => 'ghi', 'Gohir.A09G072700' => 'ghi', 'Gohir.A09G088301' => 'ghi', 'Gohir.A10G040600' => 'ghi', 'Gohir.A12G036300' => 'ghi', 'Gohir.A12G143350' => 'ghi', 'Gohir.A12G165500' => 'ghi', 'Gohir.A13G145700' => 'ghi', 'Gohir.D01G050000' => 'ghi', 'Gohir.D01G051366' => 'ghi', 'Gohir.D01G161350' => 'ghi', 'Gohir.D02G065900' => 'ghi', 'Gohir.D05G164200' => 'ghi', 'Gohir.D05G355500' => 'ghi', 'Gohir.D06G010400' => 'ghi', 'Gohir.D06G111250' => 'ghi', 'Gohir.D06G132000' => 'ghi', 'Gohir.D06G210500' => 'ghi', 'Gohir.D07G165675' => 'ghi', 'Gohir.D08G062240' => 'ghi', 'Gohir.D08G086101' => 'ghi', 'Gohir.D08G138060' => 'ghi', 'Gohir.D09G072300' => 'ghi', 'Gohir.D10G041400' => 'ghi', 'Gohir.D11G191020' => 'ghi', 'Gohir.D11G212066' => 'ghi', 'Gohir.D12G036300' => 'ghi', 'Gohir.D12G168600' => 'ghi', 'Gohir.D13G150600' => 'ghi', 'Gorai.001G057300' => 'gra', 'Gorai.002G069900' => 'gra', 'Gorai.002G200000' => 'gra', 'Gorai.003G067600' => 'gra', 'Gorai.005G074800' => 'gra', 'Gorai.006G087300' => 'gra', 'Gorai.008G037500' => 'gra', 'Gorai.008G181400' => 'gra', 'Gorai.009G169400' => 'gra', 'Gorai.009G387900' => 'gra', 'Gorai.010G013300' => 'gra', 'Gorai.010G153800' => 'gra', 'Gorai.010G255800' => 'gra', 'Gorai.011G043700' => 'gra', 'Gorai.011G198900' => 'gra', 'Gorai.013G168400' => 'gra', 'GSVIVG01005212001' => 'vvi', 'GSVIVG01006163001' => 'vvi', 'GSVIVG01009625001' => 'vvi', 'GSVIVG01014338001' => 'vvi', 'GSVIVG01020005001' => 'vvi', 'GSVIVG01021450001' => 'vvi', 'GSVIVG01023975001' => 'vvi', 'GSVIVG01034490001' => 'vvi', 'HanXRQChr04g0112071' => 'han', 'HanXRQChr05g0131151' => 'han', 'HanXRQChr09g0262371' => 'han', 'HanXRQChr09g0268401' => 'han', 'HanXRQChr10g0279241' => 'han', 'HanXRQChr10g0297961' => 'han', 'HanXRQChr11g0326231' => 'han', 'HanXRQChr11g0328471' => 'han', 'HanXRQChr16g0507941' => 'han', 'HanXRQChr17g0560211' => 'han', 'Haze_02108' => 'cav', 'Haze_02428' => 'cav', 'Haze_05593' => 'cav', 'Haze_06448' => 'cav', 'Haze_09427' => 'cav', 'Haze_12022' => 'cav', 'Haze_17612' => 'cav', 'Haze_17928' => 'cav', 'Hma1.2p1_0032F.1_g019250' => 'hma', 'Hma1.2p1_0163F.1_g072690' => 'hma', 'Hma1.2p1_0265F.1_g106710' => 'hma', 'Hma1.2p1_0286F.1_g113970' => 'hma', 'Hma1.2p1_0363F.1_g136640' => 'hma', 'Hma1.2p1_0584F.1_g183470' => 'hma', 'Hma1.2p1_0885F.1_g232570' => 'hma', 'HPP92_006022' => 'vpl', 'HPP92_007320' => 'vpl', 'HPP92_011521' => 'vpl', 'HPP92_019387' => 'vpl', 'HPP92_024038' => 'vpl', 'Hund05891' => 'sun', 'Hund06450' => 'sun', 'Hund12053' => 'sun', 'Hund16800' => 'sun', 'Hund21222' => 'sun', 'Hund22896' => 'sun', 'Hund23746' => 'sun', 'Hund27083' => 'sun', 'Lalb_Chr02g0141831' => 'lal', 'Lalb_Chr02g0141841' => 'lal', 'Lalb_Chr05g0220411' => 'lal', 'Lalb_Chr06g0162081' => 'lal', 'Lalb_Chr09g0327651' => 'lal', 'Lalb_Chr13g0295051' => 'lal', 'Lalb_Chr15g0086801' => 'lal', 'Lalb_Chr16g0383781' => 'lal', 'Lalb_Chr16g0383791' => 'lal', 'Lalb_Chr18g0055441' => 'lal', 'Lalb_Chr18g0059611' => 'lal', 'Lalb_Chr20g0109661' => 'lal', 'Lalb_Chr20g0109831' => 'lal', 'Lalb_Chr20g0121871' => 'lal', 'Lalb_Chr22g0355361' => 'lal', 'Lalb_Chr25g0286371' => 'lal', 'Lj1A1187G43' => 'lonja', 'Lj1A1205T50' => 'lonja', 'Lj1A800G33' => 'lonja', 'Lj1C1187T7' => 'lonja', 'Lj1C843T11' => 'lonja', 'Lj1g0010940' => 'lja', 'Lj2A288T69' => 'lonja', 'Lj3g0024276' => 'lja', 'Lj4A47T76' => 'lonja', 'Lj4g0005805' => 'lja', 'Lj4g0006097' => 'lja', 'Lj4g0008528' => 'lja', 'Lj4g0024907' => 'lja', 'Lj5g0012472' => 'lja', 'Lj5g0018648' => 'lja', 'Lj6C789G1' => 'lonja', 'Lj6g0004000' => 'lja', 'Lj7A292G67' => 'lonja', 'Lj7A292T64' => 'lonja', 'Lj9A400T58' => 'lonja', 'Lsat_1_v5_gn_1_126181' => 'lsa', 'Lsat_1_v5_gn_4_123041' => 'lsa', 'Lsat_1_v5_gn_4_133620' => 'lsa', 'Lsat_1_v5_gn_4_53221' => 'lsa', 'Lsat_1_v5_gn_4_71961' => 'lsa', 'Lsat_1_v5_gn_7_105241' => 'lsa', 'Lsat_1_v5_gn_7_21361' => 'lsa', 'Lsat_1_v5_gn_7_28860' => 'lsa', 'Lsat_1_v5_gn_7_31260' => 'lsa', 'Lsat_1_v5_gn_8_52801' => 'lsa', 'Manes.02G191400' => 'mes', 'Manes.03G110100' => 'mes', 'Manes.04G071100' => 'mes', 'Manes.05G100500' => 'mes', 'Manes.05G164700' => 'mes', 'Manes.15G087000' => 'mes', 'Manes.15G121500' => 'mes', 'Manes.16G028300' => 'mes', 'Manes.17G046100' => 'mes', 'Manes.17G069800' => 'mes', 'Manes.18G100500' => 'mes', 'Mapoly0002s0109' => 'mpo', 'Mapoly0024s0007' => 'mpo', 'Mapoly0089s0032' => 'mpo', 'MBI04_g42241_MAGBIO' => 'mbi', 'MBI05_g11988_MAGBIO' => 'mbi', 'MBI05_g35452_MAGBIO' => 'mbi', 'MBI07_g30179_MAGBIO' => 'mbi', 'MBI07_g35859_MAGBIO' => 'mbi', 'MBI07_g35860_MAGBIO' => 'mbi', 'MBI07_g37166_MAGBIO' => 'mbi', 'MBI08_g18172_MAGBIO' => 'mbi', 'MBI09_g08441_MAGBIO' => 'mbi', 'MBI13_g01676_MAGBIO' => 'mbi', 'MBI14_g42955_MAGBIO' => 'mbi', 'MBI16_g13161_MAGBIO' => 'mbi', 'MBI17_g27204_MAGBIO' => 'mbi', 'MBI19_g21595_MAGBIO' => 'mbi', 'MD00G1148400' => 'mdo', 'MD02G1301200' => 'mdo', 'MD03G1227800' => 'mdo', 'MD05G1041100' => 'mdo', 'MD05G1124800' => 'mdo', 'MD05G1284000' => 'mdo', 'MD05G1338800' => 'mdo', 'MD05G1338900' => 'mdo', 'MD07G1022800' => 'mdo', 'MD10G1047500' => 'mdo', 'MD10G1127500' => 'mdo', 'MD10G1262300' => 'mdo', 'MD10G1293800' => 'mdo', 'MD16G1074300' => 'mdo', 'Medtr1g021670' => 'mtr', 'Medtr1g096320' => 'mtr', 'Medtr2g013690' => 'mtr', 'Medtr2g019450' => 'mtr', 'Medtr2g085170' => 'mtr', 'Medtr4g088785' => 'mtr', 'Medtr8g055930' => 'mtr', 'Medtr8g085850' => 'mtr', 'MELO3C002605.2' => 'cme', 'MELO3C003891.2' => 'cme', 'MELO3C004012.2' => 'cme', 'MELO3C007134.2' => 'cme', 'MELO3C008118.2' => 'cme', 'MELO3C016700.2' => 'cme', 'MELO3C024127.2' => 'cme', 'MELO3C033361.2' => 'cme', 'MELO3C033362.2' => 'cme', 'Migut.C00430' => 'egut', 'Migut.C01246' => 'egut', 'Migut.E00101' => 'egut', 'Migut.H01486' => 'egut', 'Migut.H01939' => 'egut', 'Migut.K00360' => 'egut', 'Migut.M00910' => 'egut', 'Migut.M01139' => 'egut', 'Migut.N02677' => 'egut', 'MSTRG.13252' => 'ama', 'MSTRG.14701' => 'ama', 'MSTRG.1521' => 'ama', 'MSTRG.15884' => 'ama', 'MSTRG.16242' => 'ama', 'MSTRG.22285' => 'ama', 'MSTRG.22444' => 'ama', 'MSTRG.2349' => 'ama', 'MSTRG.26308' => 'ama', 'MSTRG.28296' => 'ama', 'MSTRG.9895' => 'ama', 'Nitab4.5_0000110g0060' => 'nta', 'Nitab4.5_0000420g0130' => 'nta', 'Nitab4.5_0000422g0030' => 'nta', 'Nitab4.5_0000560g0180' => 'nta', 'Nitab4.5_0000703g0100' => 'nta', 'Nitab4.5_0000786g0200' => 'nta', 'Nitab4.5_0001336g0020' => 'nta', 'Nitab4.5_0001796g0030' => 'nta', 'Nitab4.5_0003348g0060' => 'nta', 'Nitab4.5_0003698g0040' => 'nta', 'Nitab4.5_0003942g0090' => 'nta', 'Nitab4.5_0004775g0070' => 'nta', 'Nitab4.5_0004864g0030' => 'nta', 'Nitab4.5_0005615g0020' => 'nta', 'Nitab4.5_0009288g0030' => 'nta', 'Nitab4.5_0009341g0010' => 'nta', 'Nitab4.5_0009535g0010' => 'nta', 'Nn1g03995' => 'nnu', 'Nn1g04100' => 'nnu', 'Nn1g06530' => 'nnu', 'Nn3g16404' => 'nnu', 'Nn3g17212' => 'nnu', 'Nn3g20776' => 'nnu', 'Nn3g21923' => 'nnu', 'Nn5g27737' => 'nnu', 'Nn5g29461' => 'nnu', 'Nn7g38355' => 'nnu', 'Nn8g39873' => 'nnu', 'Oeu000548.2' => 'oeu', 'Oeu004672.1' => 'oeu', 'Oeu015605.2' => 'oeu', 'Oeu016092.1' => 'oeu', 'Oeu017879.3' => 'oeu', 'Oeu024910.1' => 'oeu', 'Oeu028965.1' => 'oeu', 'Oeu031269.1' => 'oeu', 'Oeu031270.1' => 'oeu', 'Oeu032535.1' => 'oeu', 'Oeu034151.1' => 'oeu', 'Oeu034152.1' => 'oeu', 'Oeu034588.2' => 'oeu', 'Oeu050846.1' => 'oeu', 'Oeu050849.2' => 'oeu', 'Oeu051063.2' => 'oeu', 'Oeu052368.1' => 'oeu', 'Oeu052370.1' => 'oeu', 'Os01g0210400' => 'osa', 'Os01g0304300' => 'osa', 'Os01g0749100' => 'osa', 'Os02g0745800' => 'osa', 'Os03g0769050' => 'osa', 'Os05g0531500' => 'osa', 'Os06g0724300' => 'osa', 'Os11g0198100' => 'osa', 'Peaxi162Scf00069g01425' => 'pax', 'Peaxi162Scf00280g00811' => 'pax', 'Peaxi162Scf00310g00615' => 'pax', 'Peaxi162Scf00362g00542' => 'pax', 'Peaxi162Scf00461g00310' => 'pax', 'Peaxi162Scf00530g00118' => 'pax', 'Peaxi162Scf00541g00057' => 'pax', 'Peaxi162Scf00661g00017' => 'pax', 'Peaxi162Scf00926g00027' => 'pax', 'Peaxi162Scf01064g00263' => 'pax', 'Peaxi162Scf01211g00135' => 'pax', 'PGR004G2336' => 'pgr', 'PGR042G0327' => 'pgr', 'PGR042G1957' => 'pgr', 'PGR042G2003' => 'pgr', 'PGR042G3929' => 'pgr', 'PGR083G1137' => 'pgr', 'PGR083G1364' => 'pgr', 'PGSC0003DMG400003381' => 'stu', 'PGSC0003DMG400003417' => 'stu', 'PGSC0003DMG400008981' => 'stu', 'PGSC0003DMG400012417' => 'stu', 'PGSC0003DMG400012823' => 'stu', 'PGSC0003DMG400016885' => 'stu', 'PGSC0003DMG400022812' => 'stu', 'PGSC0003DMG400029726' => 'stu', 'PGSC0003DMG401009243' => 'stu', 'PGSC0003DMG401031505' => 'stu', 'PGSC0003DMG402031505' => 'stu', 'Phvul.001G017600' => 'pvu', 'Phvul.002G193500' => 'pvu', 'Phvul.002G228900' => 'pvu', 'Phvul.002G236800' => 'pvu', 'Phvul.003G049500' => 'pvu', 'Phvul.005G072000' => 'pvu', 'Phvul.006G164800' => 'pvu', 'Phvul.006G185100' => 'pvu', 'Phvul.007G090000' => 'pvu', 'Potri.001G399800' => 'ptr', 'Potri.002G149900' => 'ptr', 'Potri.004G044100' => 'ptr', 'Potri.004G177600' => 'ptr', 'Potri.009G138000' => 'ptr', 'Potri.010G094000' => 'ptr', 'Potri.011G053000' => 'ptr', 'Potri.011G119300' => 'ptr', 'Potri.013G113700' => 'ptr', 'Potri.018G107800' => 'ptr', 'Potri.019G084100' => 'ptr', 'Pp3c14_23720' => 'ppa', 'Pp3c16_6340' => 'ppa', 'Pp3c23_13420' => 'ppa', 'Pp3c24_2740' => 'ppa', 'Pp3c25_860' => 'ppa', 'Pp3c8_21750' => 'ppa', 'Prupe.1G273000' => 'ppe', 'Prupe.1G273700' => 'ppe', 'Prupe.1G274100' => 'ppe', 'Prupe.2G023300' => 'ppe', 'Prupe.4G048000' => 'ppe', 'Prupe.4G080400' => 'ppe', 'Prupe.4G181200' => 'ppe', 'Prupe.8G056900' => 'ppe', 'Prupe.8G168700' => 'ppe', 'Psat1g189080' => 'psa', 'Psat1g204760' => 'psa', 'Psat4g175560' => 'psa', 'Psat4g177720' => 'psa', 'Psat5g244240' => 'psa', 'Psat6g010720' => 'psa', 'Psat6g187200' => 'psa', 'Psat7g072040' => 'psa', 'PSO017G3501' => 'pso', 'PSO063G2148' => 'pso', 'PSO063G5608' => 'pso', 'PSO210G6392' => 'pso', 'PSO541G2319' => 'pso', 'PSO541G2836' => 'pso', 'PSO541G4012' => 'pso', 'PSO541G6253' => 'pso', 'PSO675G0580' => 'pso', 'PSO675G0856' => 'pso', 'PSO675G5635' => 'pso', 'PSO675G9157' => 'pso', 'PSO832G1660' => 'pso', 'PSO832G1969' => 'pso', 'QL02p007186' => 'qlo', 'QL02p033904' => 'qlo', 'QL03p064391' => 'qlo', 'QL05p040593' => 'qlo', 'QL05p058242' => 'qlo', 'QL08p021825' => 'qlo', 'QL11p004981' => 'qlo', 'RcHm_v2.0_Chr1g0318301' => 'rch', 'RcHm_v2.0_Chr4g0418501' => 'rch', 'RcHm_v2.0_Chr4g0439971' => 'rch', 'RcHm_v2.0_Chr5g0008541' => 'rch', 'RcHm_v2.0_Chr5g0014101' => 'rch', 'RcHm_v2.0_Chr5g0014131' => 'rch', 'RcHm_v2.0_Chr5g0033621' => 'rch', 'RcHm_v2.0_Chr6g0272041' => 'rch', 'RcHm_v2.0_Chr6g0278831' => 'rch', 'Rhsim02G0130400' => 'rsi', 'Rhsim02G0171100' => 'rsi', 'Rhsim05G0053000' => 'rsi', 'Rhsim05G0053100' => 'rsi', 'Rhsim06G0096500' => 'rsi', 'Rhsim06G0096600' => 'rsi', 'Rhsim06G0199100' => 'rsi', 'Rhsim12G0062300' => 'rsi', 'Rhsim12G0062800' => 'rsi', 'Sabra02G0118600' => 'sbr', 'Sabra04G0027300' => 'sbr', 'Sabra04G0119500' => 'sbr', 'Sabra08G0112500' => 'sbr', 'Sabra11G0036800' => 'sbr', 'Sabra11G0103800' => 'sbr', 'Sabra13G0096300' => 'sbr', 'Sabra16G0262300' => 'sbr', 'Sabra18G0091700' => 'sbr', 'Sabra19G0095400' => 'sbr', 'SalBow6G3080' => 'sbo', 'SalBow7G1157' => 'sbo', 'SalBow7G2123' => 'sbo', 'SalBow7G2285' => 'sbo', 'SalBow7G3537' => 'sbo', 'SalBow8G2947' => 'sbo', 'SalBow8G4463' => 'sbo', 'SalBow8G5466' => 'sbo', 'Sc01g0001750' => 'sci', 'Sc02g0006640' => 'sci', 'Sc02g0006670' => 'sci', 'Sc04g0008220' => 'sci', 'Sc05g0006190' => 'sci', 'Sc08g0002760' => 'sci', 'Sc17g0006170' => 'sci', 'Sc22g0002050' => 'sci', 'Sc23g0001190' => 'sci', 'Sc24g0000980' => 'sci', 'Sed0006245' => 'sed', 'Sed0007543' => 'sed', 'Sed0009411' => 'sed', 'Sed0010765' => 'sed', 'Sed0012944' => 'sed', 'Sed0014682' => 'sed', 'Sed0016174' => 'sed', 'Sed0016796' => 'sed', 'Sed0020317' => 'sed', 'Sed0021467' => 'sed', 'SEGI_01316' => 'sgi', 'SEGI_03374' => 'sgi', 'SEGI_16265' => 'sgi', 'SEGI_18569' => 'sgi', 'SEGI_20351' => 'sgi', 'SEGI_26395' => 'sgi', 'SEGI_29469' => 'sgi', 'SEGI_34771' => 'sgi', 'SEGI_36769' => 'sgi', 'SEGI_37139' => 'sgi', 'SGA_v2.0_scaffold100G29687' => 'sas', 'SGA_v2.0_scaffold118G32472' => 'sas', 'SGA_v2.0_scaffold14G07051' => 'sas', 'SGA_v2.0_scaffold183G39845' => 'sas', 'SGA_v2.0_scaffold1G00174' => 'sas', 'SGA_v2.0_scaffold22G09714' => 'sas', 'SGA_v2.0_scaffold333G48992' => 'sas', 'SGA_v2.0_scaffold46G17491' => 'sas', 'SGA_v2.0_scaffold49G18294' => 'sas', 'SGA_v2.0_scaffold63G21658' => 'sas', 'SHI01741' => 'shi', 'SHI05771' => 'shi', 'SHI18077' => 'shi', 'SHI20525' => 'shi', 'SHI20527' => 'shi', 'SHI20528' => 'shi', 'SMO172G0185' => 'smo', 'SMO198G0020' => 'smo', 'SMO351G0006' => 'smo', 'SMO356G0118' => 'smo', 'SMO358G0296' => 'smo', 'SMO367G0079' => 'smo', 'SMO367G1277' => 'smo', 'Solyc01g014220.3' => 'sly', 'Solyc01g111770.2' => 'sly', 'Solyc02g078180.3' => 'sly', 'Solyc03g006430.3' => 'sly', 'Solyc03g006456.1' => 'sly', 'Solyc03g079860.2' => 'sly', 'Solyc04g079770.3' => 'sly', 'Solyc05g007430.4' => 'sly', 'Solyc07g063150.3' => 'sly', 'Solyc08g016620.3' => 'sly', 'Solyc09g057590.3' => 'sly', 'Solyc09g057600.1' => 'sly', 'Solyc10g009050.3' => 'sly', 'Solyc11g017420.2' => 'sly', 'Sopen01g053810' => 'spe', 'Sopen02g023040' => 'spe', 'Sopen03g002440' => 'spe', 'Sopen04g033350' => 'spe', 'Sopen05g003310' => 'spe', 'Sopen07g004050' => 'spe', 'Sopen07g031340' => 'spe', 'Sopen08g006990' => 'spe', 'Sopen10g004830' => 'spe', 'Sopen11g009370' => 'spe', 'Sp1g24450' => 'spa', 'Sp1g29670' => 'spa', 'Sp1g39600' => 'spa', 'Sp2g11080' => 'spa', 'Sp2g13970' => 'spa', 'Sp4g16130' => 'spa', 'Sp6g13080' => 'spa', 'Sp7g37270' => 'spa', 'TAR371G0065' => 'tar', 'TAR376G0340' => 'tar', 'TAR376G0435' => 'tar', 'TAR381G0002' => 'tar', 'TAR381G1236' => 'tar', 'TAR624G0055' => 'tar', 'TAR624G0324' => 'tar', 'TAR624G0696' => 'tar', 'TAR624G0906' => 'tar', 'TAR625G0107' => 'tar', 'TAR626G0015' => 'tar', 'TAR626G1356' => 'tar', 'TAR627G0888' => 'tar', 'TAR628G0399' => 'tar', 'TAR628G1327' => 'tar', 'TAR629G2831' => 'tar', 'TAR629G2874' => 'tar', 'TAR633G1432' => 'tar', 'TAR633G2771' => 'tar', 'THA.LOC104803394' => 'tha', 'THA.LOC104805153' => 'tha', 'THA.LOC104806784' => 'tha', 'THA.LOC104810473' => 'tha', 'THA.LOC104813100' => 'tha', 'THA.LOC104814215' => 'tha', 'THA.LOC104815554' => 'tha', 'THA.LOC104820544' => 'tha', 'THA.LOC104824754' => 'tha', 'THA.LOC104827717' => 'tha', 'Thecc.02G031400' => 'tca', 'Thecc.02G055900' => 'tca', 'Thecc.02G350800' => 'tca', 'Thecc.06G150900' => 'tca', 'Thecc.06G186600' => 'tca', 'Thecc.07G089600' => 'tca', 'Thecc.08G020400' => 'tca', 'Thecc.08G182100' => 'tca', 'Thhalv10000873m.g' => 'esa', 'Thhalv10004185m.g' => 'esa', 'Thhalv10006981m.g' => 'esa', 'Thhalv10007204m.g' => 'esa', 'Thhalv10011374m.g' => 'esa', 'Thhalv10013482m.g' => 'esa', 'Thhalv10017801m.g' => 'esa', 'Thhalv10024983m.g' => 'esa', 'TPR.G12072' => 'tpr', 'TPR.G15769' => 'tpr', 'TPR.G16504' => 'tpr', 'TPR.G16506' => 'tpr', 'TPR.G24345' => 'tpr', 'TPR.G26666' => 'tpr', 'TPR.G27320' => 'tpr', 'TPR.G31819' => 'tpr', 'TPR.G38879' => 'tpr', 'TPR.G39015' => 'tpr', 'TPR.G8819' => 'tpr', 'TWI09G0924' => 'twi', 'TWI12G0811' => 'twi', 'TWI12G1294' => 'twi', 'TWI31G0150' => 'twi', 'TWI36G1262' => 'twi', 'TWI38G1287' => 'twi', 'TWI38G1633' => 'twi', 'TWI38G1982' => 'twi', 'TWI39G0116' => 'twi', 'TWI60G1011' => 'twi', 'TWI63G0171' => 'twi', 'TWI73G0839' => 'twi', 'TWI79G1511' => 'twi', 'unitig_0.g915' => 'ugi', 'unitig_0.g916' => 'ugi', 'unitig_21.g20219' => 'ugi', 'unitig_21.g20416' => 'ugi', 'unitig_578.g16132' => 'ugi', 'unitig_578.g16718' => 'ugi', 'unitig_62.g23481' => 'ugi', 'unitig_744.g24535' => 'ugi', 'unitig_749.g13525' => 'ugi', 'vmacro01248' => 'vma', 'vmacro02290' => 'vma', 'vmacro10946' => 'vma', 'vmacro11865' => 'vma', 'vmacro12493' => 'vma', 'vmacro17322' => 'vma', 'vmacro21599' => 'vma', 'vmacro23041' => 'vma', 'VMungo0251G0004' => 'vmu', 'VMungo0251G2639' => 'vmu', 'VMungo0251G2967' => 'vmu', 'VMungo0540G0864' => 'vmu', 'VMungo0540G1569' => 'vmu', 'VMungo0647G0317' => 'vmu', 'VMungo0720G1373' => 'vmu', 'VMungo0720G1508' => 'vmu', 'VMungo1080G0485' => 'vmu', 'VMungo1215G3177' => 'vmu', 'Zm00001eb112600' => 'zma', 'Zm00001eb120220' => 'zma', 'Zm00001eb153240' => 'zma', 'Zm00001eb168880' => 'zma', 'Zm00001eb213920' => 'zma', 'Zm00001eb228280' => 'zma', 'Zm00001eb254580' => 'zma', 'Zm00001eb272180' => 'zma', 'Zm00001eb293190' => 'zma', 'Zm00001eb322930' => 'zma', 'Zm00001eb353360' => 'zma', 'Zm00001eb353390' => 'zma', 'Zm00001eb353430' => 'zma', 'Zm00001eb353440' => 'zma', 'Zm00001eb353780' => 'zma' ) $gf_id = 'HOM05D000499' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000499' ) $data_identifier = 'HOM05D000499' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 29, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 12, 'amhyb' => (int) 8, 'aly' => (int) 12, 'aox' => (int) 9, 'arhy' => (int) 26, 'ath' => (int) 8, 'atr' => (int) 7, 'acertr' => (int) 10, 'cqu' => (int) 15, 'bca' => (int) 29, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 11, 'cansat' => (int) 8, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 9, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 8, 'cpa' => (int) 10, 'csa' => (int) 7, 'camsi' => (int) 20, 'dca' => (int) 8, 'din' => (int) 12, 'dzi' => (int) 14, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 6, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 38, 'gra' => (int) 16, 'vvi' => (int) 8, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 5, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 11, 'lja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 11, 'mpo' => (int) 3, 'mbi' => (int) 14, 'mdo' => (int) 14, 'mtr' => (int) 8, 'cme' => (int) 9, 'egut' => (int) 9, 'ama' => (int) 11, 'nta' => (int) 17, 'nnu' => (int) 11, 'oeu' => (int) 18, 'osa' => (int) 8, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 6, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 9, 'rsi' => (int) 9, 'sbr' => (int) 10, 'sbo' => (int) 8, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 10, 'sas' => (int) 10, 'shi' => (int) 6, 'smo' => (int) 7, 'sly' => (int) 14, 'spe' => (int) 10, 'spa' => (int) 8, 'tar' => (int) 19, 'tha' => (int) 10, 'tca' => (int) 8, 'esa' => (int) 8, 'tpr' => (int) 11, 'twi' => (int) 13, 'ugi' => (int) 9, 'vma' => (int) 8, 'vmu' => (int) 10, 'zma' => (int) 15 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb353780' $species_info = array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ) $local_species = 'stu' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000499', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1066', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p29780' => 'bna', 'A02p33180' => 'bna', 'A03p16470' => 'bna', 'A03p66010' => 'bna', 'A04p25970' => 'bna', 'A06p01270' => 'bna', 'A06p46080' => 'bna', 'A07p11400' => 'bna', 'A08p01840' => 'bna', 'A08p08230' => 'bna', 'A08p25740' => 'bna', 'A09p32070' => 'bna', 'A09p37830' => 'bna', 'A09p42840' => 'bna', 'A09p42850' => 'bna', 'Aa31LG10G2060' => 'aar', 'Aa31LG2G7410' => 'aar', 'Aa31LG6G10200' => 'aar', 'Aa31LG6G16680' => 'aar', 'Aa31LG6G8470' => 'aar', 'Aa31LG9G12730' => 'aar', 'Aa31LG9G13680' => 'aar', 'Aa31LG9G14920' => 'aar', 'Aa31LG9G6650' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4977' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5467' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3254' => 'aag', 'Actinidia02578' => 'ach', 'Actinidia07693' => 'ach', 'Actinidia08413' => 'ach', 'Actinidia08414' => 'ach', 'Actinidia15289' => 'ach', 'Actinidia19871' => 'ach', 'Actinidia21475' => 'ach', 'Actinidia22576' => 'ach', 'Actinidia28327' => 'ach', 'Actinidia32491' => 'ach', 'Actinidia39463' => 'ach', 'Actinidia39571' => 'ach', 'Ah.01g013750' => 'amhyb', 'Ah.01g023210' => 'amhyb', 'Ah.04g164850' => 'amhyb', 'Ah.05g178060' => 'amhyb', 'Ah.07g204270' => 'amhyb', 'Ah.07g208480' => 'amhyb', 'Ah.09g237410' => 'amhyb', 'Ah.14g089460' => 'amhyb', 'AL1G41790' => 'aly', 'AL1G49050' => 'aly', 'AL1G53810' => 'aly', 'AL1G61400' => 'aly', 'AL4G18580' => 'aly', 'AL5G12510' => 'aly', 'AL5G12540' => 'aly', 'AL6G43230' => 'aly', 'AL7G10370' => 'aly', 'AL7G19250' => 'aly', 'AL8G12240' => 'aly', 'AL8G18540' => 'aly', 'Aqoxy1G02409' => 'aox', 'Aqoxy2G03993' => 'aox', 'Aqoxy3G03357' => 'aox', 'Aqoxy4G00785' => 'aox', 'Aqoxy5G02598' => 'aox', 'Aqoxy6G00132' => 'aox', 'Aqoxy7G01776' => 'aox', 'Aqoxy7G02316' => 'aox', 'Aqoxy7G03973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.12AFKW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B8730' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27IQR1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3F75VG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3RE0GA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41TCQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.527VTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FIR39' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5W8UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DA38EV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ63HS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H1I32C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HC27T5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4M8AP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7N3CZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9UVDZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LS1NQA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT1D4B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SKC4TM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCFV76' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF9Q1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQWD9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1ZM88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WE07RT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YCK7VH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJE6Q6' => 'arhy', 'AT1G28240' => 'ath', 'AT1G34550' => 'ath', 'AT1G53040' => 'ath', 'AT2G02910' => 'ath', 'AT4G09630' => 'ath', 'AT4G38500' => 'ath', 'AT5G42660' => 'ath', 'AT5G46220' => 'ath', 'ATR0152G026' => 'atr', 'ATR0564G343' => 'atr', 'ATR0706G151' => 'atr', 'ATR0733G207' => 'atr', 'ATR0751G234' => 'atr', 'ATR0807G048' => 'atr', 'ATR1091G084' => 'atr', 'Atru.chr10.1229' => 'acertr', 'Atru.chr10.1230' => 'acertr', 'Atru.chr10.1874' => 'acertr', 'Atru.chr11.1808' => 'acertr', 'Atru.chr13.1795' => 'acertr', 'Atru.chr13.570' => 'acertr', 'Atru.chr2.2608' => 'acertr', 'Atru.chr2.2609' => 'acertr', 'Atru.chr5.3428' => 'acertr', 'Atru.chr8.1171' => 'acertr', 'AUR62004651' => 'cqu', 'AUR62008675' => 'cqu', 'AUR62010014' => 'cqu', 'AUR62013004' => 'cqu', 'AUR62014825' => 'cqu', 'AUR62015015' => 'cqu', 'AUR62015151' => 'cqu', 'AUR62017020' => 'cqu', 'AUR62019422' => 'cqu', 'AUR62023570' => 'cqu', 'AUR62025571' => 'cqu', 'AUR62029098' => 'cqu', 'AUR62033863' => 'cqu', 'AUR62034296' => 'cqu', 'AUR62040075' => 'cqu', 'BcaB02g07334' => 'bca', 'BcaB02g10575' => 'bca', 'BcaB03g12119' => 'bca', 'BcaB03g12120' => 'bca', 'BcaB03g13945' => 'bca', 'BcaB04g17123' => 'bca', 'BcaB04g17867' => 'bca', 'BcaB04g19839' => 'bca', 'BcaB07g30317' => 'bca', 'BcaB07g32432' => 'bca', 'BcaB07g33362' => 'bca', 'BcaB08g36611' => 'bca', 'BcaC01g00028' => 'bca', 'BcaC01g01356' => 'bca', 'BcaC01g02034' => 'bca', 'BcaC01g06051' => 'bca', 'BcaC03g16839' => 'bca', 'BcaC03g17176' => 'bca', 'BcaC05g26829' => 'bca', 'BcaC06g31490' => 'bca', 'BcaC06g35344' => 'bca', 'BcaC06g36570' => 'bca', 'BcaC07g37537' => 'bca', 'BcaC08g43491' => 'bca', 'BcaC08g43773' => 'bca', 'BcaNung00234' => 'bca', 'BcaNung01982' => 'bca', 'BcaNung03707' => 'bca', 'BcaNung06454' => 'bca', 'BolC2t10762H' => 'bol', 'BolC2t11191H' => 'bol', 'BolC3t14322H' => 'bol', 'BolC3t19747H' => 'bol', 'BolC3t21425H' => 'bol', 'BolC4t27800H' => 'bol', 'BolC5t31423H' => 'bol', 'BolC6t35951H' => 'bol', 'BolC6t36282H' => 'bol', 'BolC7t40678H' => 'bol', 'BolC7t40679H' => 'bol', 'BolC7t42222H' => 'bol', 'BolC7t43492H' => 'bol', 'BolC7t46785H' => 'bol', 'BolC8t47853H' => 'bol', 'BolC9t56805H' => 'bol', 'BraA02t08000Z' => 'bra', 'BraA02t08341Z' => 'bra', 'BraA03t10936Z' => 'bra', 'BraA03t15657Z' => 'bra', 'BraA04t18100Z' => 'bra', 'BraA05t20523Z' => 'bra', 'BraA06t23353Z' => 'bra', 'BraA06t27473Z' => 'bra', 'BraA06t27769Z' => 'bra', 'BraA07t28928Z' => 'bra', 'BraA08t32236Z' => 'bra', 'BraA08t32841Z' => 'bra', 'BraA08t34524Z' => 'bra', 'BraA09t38742Z' => 'bra', 'BraA09t39295Z' => 'bra', 'C02p47180' => 'bna', 'C02p50990' => 'bna', 'C03p19360' => 'bna', 'C03p74950' => 'bna', 'C03p91000' => 'bna', 'C04p63260' => 'bna', 'C05p27050' => 'bna', 'C06p08750' => 'bna', 'C06p11490' => 'bna', 'C07p02820' => 'bna', 'C07p17180' => 'bna', 'C07p29440' => 'bna', 'C07p63730' => 'bna', 'C09p39260' => 'bna', 'CAN.G1164.34' => 'can', 'CAN.G1164.39' => 'can', 'CAN.G1530.3' => 'can', 'CAN.G162.61' => 'can', 'CAN.G176.6' => 'can', 'CAN.G289.49' => 'can', 'CAN.G370.21' => 'can', 'CAN.G370.22' => 'can', 'CAN.G371.117' => 'can', 'CAN.G58.37' => 'can', 'CAN.G588.98' => 'can', 'CANSAT21G2266' => 'cansat', 'CANSAT25G2799' => 'cansat', 'CANSAT35G0862' => 'cansat', 'CANSAT35G1704' => 'cansat', 'CANSAT35G1760' => 'cansat', 'CANSAT56G3971' => 'cansat', 'CANSAT56G4116' => 'cansat', 'CANSAT80G1259' => 'cansat', 'CARHR027730' => 'chi', 'CARHR033880' => 'chi', 'CARHR043270' => 'chi', 'CARHR145330' => 'chi', 'CARHR145340' => 'chi', 'CARHR175570' => 'chi', 'CARHR181570' => 'chi', 'CARHR258470' => 'chi', 'CARHR260490' => 'chi', 'CARHR294220' => 'chi', 'Carub.0001s2668' => 'cru', 'Carub.0001s3257' => 'cru', 'Carub.0001s4220' => 'cru', 'Carub.0005s0179' => 'cru', 'Carub.0006s2807' => 'cru', 'Carub.0007s0039' => 'cru', 'Carub.0008s0169' => 'cru', 'Carub.0008s0636' => 'cru', 'Ca_00338_v3' => 'car', 'Ca_00542_v3' => 'car', 'Ca_01844_v3' => 'car', 'Ca_10611_v3' => 'car', 'Ca_13326_v3' => 'car', 'Ca_17944_v3' => 'car', 'Ca_18546_v3' => 'car', 'Ca_24219_v3' => 'car', 'Ca_29972_v3' => 'car', 'CBR_g3681' => 'cbr', 'CBR_g40021' => 'cbr', 'Cc01_g08140' => 'ccan', 'Cc02_g13410' => 'ccan', 'Cc02_g37480' => 'ccan', 'Cc05_g12030' => 'ccan', 'Cc09_g03370' => 'ccan', 'Cc09_g10300' => 'ccan', 'Cc10_g03530' => 'ccan', 'Cc10_g11380' => 'ccan', 'CDE01G0176' => 'cde', 'CDE02G0675' => 'cde', 'CDE02G0942' => 'cde', 'CDE02G1153' => 'cde', 'CDE02G4177' => 'cde', 'CDE04G2117' => 'cde', 'CDE04G2736' => 'cde', 'CDE08G1161' => 'cde', 'CDE09G1238' => 'cde', 'Cfa000467' => 'cfa', 'Cfa000947' => 'cfa', 'Cfa004969' => 'cfa', 'Cfa005284' => 'cfa', 'Cfa008993' => 'cfa', 'Cfa018187' => 'cfa', 'Cfa018454' => 'cfa', 'Cfa020585' => 'cfa', 'Ciclev10000424m.g' => 'ccl', 'Ciclev10003605m.g' => 'ccl', 'Ciclev10007828m.g' => 'ccl', 'Ciclev10014620m.g' => 'ccl', 'Ciclev10015169m.g' => 'ccl', 'Ciclev10018291m.g' => 'ccl', 'Ciclev10028256m.g' => 'ccl', 'Ciclev10033822m.g' => 'ccl', 'CiPaw.05G060300' => 'cil', 'CiPaw.05G085000' => 'cil', 'CiPaw.06G083700' => 'cil', 'CiPaw.06G120300' => 'cil', 'CiPaw.09G060500' => 'cil', 'CiPaw.09G123800' => 'cil', 'CiPaw.11G169700' => 'cil', 'CiPaw.12G118300' => 'cil', 'CiPaw.15G071000' => 'cil', 'CiPaw.15G081900' => 'cil', 'ClCG01G024610' => 'cla', 'ClCG03G006070' => 'cla', 'ClCG05G019250' => 'cla', 'ClCG09G009500' => 'cla', 'ClCG11G008200' => 'cla', 'ClCG11G018080' => 'cla', 'COL.COLO4_17373' => 'col', 'COL.COLO4_22994' => 'col', 'COL.COLO4_26389' => 'col', 'COL.COLO4_27170' => 'col', 'COL.COLO4_31074' => 'col', 'COL.COLO4_31465' => 'col', 'COL.COLO4_36438' => 'col', 'COL.COLO4_36439' => 'col', 'Cpa.g.c38781' => 'cpa', 'Cpa.g.sc128.12' => 'cpa', 'Cpa.g.sc166.7' => 'cpa', 'Cpa.g.sc166.8' => 'cpa', 'Cpa.g.sc20.111' => 'cpa', 'Cpa.g.sc27.31' => 'cpa', 'Cpa.g.sc64.36' => 'cpa', 'Cpa.g.sc64.37' => 'cpa', 'Cpa.g.sc66.49' => 'cpa', 'Cpa.g.sc80.64' => 'cpa', 'CsaV3_1G012320' => 'csa', 'CsaV3_2G008480' => 'csa', 'CsaV3_2G033450' => 'csa', 'CsaV3_3G044830' => 'csa', 'CsaV3_4G033710' => 'csa', 'CsaV3_6G051730' => 'csa', 'CsaV3_7G025350' => 'csa', 'CSS0001067' => 'camsi', 'CSS0005996' => 'camsi', 'CSS0006590' => 'camsi', 'CSS0009673' => 'camsi', 'CSS0010201' => 'camsi', 'CSS0010549' => 'camsi', 'CSS0011364' => 'camsi', 'CSS0014473' => 'camsi', 'CSS0014961' => 'camsi', 'CSS0020191' => 'camsi', 'CSS0021165' => 'camsi', 'CSS0022306' => 'camsi', 'CSS0030591' => 'camsi', 'CSS0030696' => 'camsi', 'CSS0032653' => 'camsi', 'CSS0037487' => 'camsi', 'CSS0041102' => 'camsi', 'CSS0041261' => 'camsi', 'CSS0046246' => 'camsi', 'CSS0049256' => 'camsi', 'DCAR_004075' => 'dca', 'DCAR_011538' => 'dca', 'DCAR_019553' => 'dca', 'DCAR_020952' => 'dca', 'DCAR_021739' => 'dca', 'DCAR_027407' => 'dca', 'DCAR_027913' => 'dca', 'DCAR_028066' => 'dca', 'Dinv05899' => 'din', 'Dinv07563' => 'din', 'Dinv08010' => 'din', 'Dinv14125' => 'din', 'Dinv20172' => 'din', 'Dinv30743' => 'din', 'Dinv31229' => 'din', 'Dinv34162' => 'din', 'Dinv36028' => 'din', 'Dinv39368' => 'din', 'Dinv40565' => 'din', 'Dinv41706' => 'din', 'Duzib052G0089' => 'dzi', 'Duzib116G0641' => 'dzi', 'Duzib132G0069' => 'dzi', 'Duzib132G1219' => 'dzi', 'Duzib147G0278' => 'dzi', 'Duzib160G0480' => 'dzi', 'Duzib170G0661' => 'dzi', 'Duzib177G0591' => 'dzi', 'Duzib187G1353' => 'dzi', 'Duzib192G0858' => 'dzi', 'Duzib192G0883' => 'dzi', 'Duzib213G0506' => 'dzi', 'Duzib235G0289' => 'dzi', 'Duzib251G0422' => 'dzi', 'ECA232G3898' => 'eca', 'ECA233G5950' => 'eca', 'ECA234G1699' => 'eca', 'ECA234G2421' => 'eca', 'ECA236G0426' => 'eca', 'ECA236G4331' => 'eca', 'ECA248G2573' => 'eca', 'EL10Ac1g00077' => 'bvu', 'EL10Ac1g01746' => 'bvu', 'EL10Ac2g03464' => 'bvu', 'EL10Ac4g08176' => 'bvu', 'EL10Ac7g17521' => 'bvu', 'EL10Ac8g20386' => 'bvu', 'EL10Ac9g21343' => 'bvu', 'EL10Ac9g22688' => 'bvu', 'Eucgr.B03434' => 'egr', 'Eucgr.D00618' => 'egr', 'Eucgr.E02395' => 'egr', 'Eucgr.F01129' => 'egr', 'Eucgr.F02622' => 'egr', 'Eucgr.F04207' => 'egr', 'FAN01G0570' => 'fan', 'FAN03G3351' => 'fan', 'FAN06G3702' => 'fan', 'FAN07G2149' => 'fan', 'FAN10G3758' => 'fan', 'FAN11G1170' => 'fan', 'FAN11G2050' => 'fan', 'FAN11G2724' => 'fan', 'FAN12G1700' => 'fan', 'FAN12G2028' => 'fan', 'FAN15G1160' => 'fan', 'FAN15G3063' => 'fan', 'FAN16G2540' => 'fan', 'FAN16G3077' => 'fan', 'FAN16G3624' => 'fan', 'FAN17G0221' => 'fan', 'FAN20G2492' => 'fan', 'FAN20G2905' => 'fan', 'FAN21G0548' => 'fan', 'FAN21G1300' => 'fan', 'FAN22G0077' => 'fan', 'FAN22G1315' => 'fan', 'FAN24G1280' => 'fan', 'FAN24G1445' => 'fan', 'FAN24G3527' => 'fan', 'FAN25G0464' => 'fan', 'FAN25G2885' => 'fan', 'FAN25G3270' => 'fan', 'FAN27G1101' => 'fan', 'FAN27G2846' => 'fan', 'FAN27G3524' => 'fan', 'FvH4_2g11770' => 'fve', 'FvH4_2g15630' => 'fve', 'FvH4_3g05570' => 'fve', 'FvH4_3g09110' => 'fve', 'FvH4_3g19940' => 'fve', 'FvH4_4g04821' => 'fve', 'FvH4_4g31480' => 'fve', 'FvH4_7g01740' => 'fve', 'Glyma.05G130400' => 'gma', 'Glyma.05G156400' => 'gma', 'Glyma.07G197000' => 'gma', 'Glyma.08G085151' => 'gma', 'Glyma.08G114500' => 'gma', 'Glyma.08G300400' => 'gma', 'Glyma.10G215800' => 'gma', 'Glyma.12G224400' => 'gma', 'Glyma.13G179300' => 'gma', 'Glyma.13G218151' => 'gma', 'Glyma.13G238800' => 'gma', 'Glyma.13G276900' => 'gma', 'Glyma.14G078200' => 'gma', 'Glyma.15G074500' => 'gma', 'Glyma.15G094100' => 'gma', 'Glyma.17G247200' => 'gma', 'Glyma.18G120100' => 'gma', 'Glyma.20G176000' => 'gma', 'Gohir.A01G063600' => 'ghi', 'Gohir.A01G170301' => 'ghi', 'Gohir.A02G060500' => 'ghi', 'Gohir.A05G133850' => 'ghi', 'Gohir.A05G161400' => 'ghi', 'Gohir.A06G012900' => 'ghi', 'Gohir.A06G035901' => 'ghi', 'Gohir.A06G127100' => 'ghi', 'Gohir.A06G210500' => 'ghi', 'Gohir.A08G008650' => 'ghi', 'Gohir.A09G072700' => 'ghi', 'Gohir.A09G088301' => 'ghi', 'Gohir.A10G040600' => 'ghi', 'Gohir.A12G036300' => 'ghi', 'Gohir.A12G143350' => 'ghi', 'Gohir.A12G165500' => 'ghi', 'Gohir.A13G145700' => 'ghi', 'Gohir.D01G050000' => 'ghi', 'Gohir.D01G051366' => 'ghi', 'Gohir.D01G161350' => 'ghi', 'Gohir.D02G065900' => 'ghi', 'Gohir.D05G164200' => 'ghi', 'Gohir.D05G355500' => 'ghi', 'Gohir.D06G010400' => 'ghi', 'Gohir.D06G111250' => 'ghi', 'Gohir.D06G132000' => 'ghi', 'Gohir.D06G210500' => 'ghi', 'Gohir.D07G165675' => 'ghi', 'Gohir.D08G062240' => 'ghi', 'Gohir.D08G086101' => 'ghi', 'Gohir.D08G138060' => 'ghi', 'Gohir.D09G072300' => 'ghi', 'Gohir.D10G041400' => 'ghi', 'Gohir.D11G191020' => 'ghi', 'Gohir.D11G212066' => 'ghi', 'Gohir.D12G036300' => 'ghi', 'Gohir.D12G168600' => 'ghi', 'Gohir.D13G150600' => 'ghi', 'Gorai.001G057300' => 'gra', 'Gorai.002G069900' => 'gra', 'Gorai.002G200000' => 'gra', 'Gorai.003G067600' => 'gra', 'Gorai.005G074800' => 'gra', 'Gorai.006G087300' => 'gra', 'Gorai.008G037500' => 'gra', 'Gorai.008G181400' => 'gra', 'Gorai.009G169400' => 'gra', 'Gorai.009G387900' => 'gra', 'Gorai.010G013300' => 'gra', 'Gorai.010G153800' => 'gra', 'Gorai.010G255800' => 'gra', 'Gorai.011G043700' => 'gra', 'Gorai.011G198900' => 'gra', 'Gorai.013G168400' => 'gra', 'GSVIVG01005212001' => 'vvi', 'GSVIVG01006163001' => 'vvi', 'GSVIVG01009625001' => 'vvi', 'GSVIVG01014338001' => 'vvi', 'GSVIVG01020005001' => 'vvi', 'GSVIVG01021450001' => 'vvi', 'GSVIVG01023975001' => 'vvi', 'GSVIVG01034490001' => 'vvi', 'HanXRQChr04g0112071' => 'han', 'HanXRQChr05g0131151' => 'han', 'HanXRQChr09g0262371' => 'han', 'HanXRQChr09g0268401' => 'han', 'HanXRQChr10g0279241' => 'han', 'HanXRQChr10g0297961' => 'han', 'HanXRQChr11g0326231' => 'han', 'HanXRQChr11g0328471' => 'han', 'HanXRQChr16g0507941' => 'han', 'HanXRQChr17g0560211' => 'han', 'Haze_02108' => 'cav', 'Haze_02428' => 'cav', 'Haze_05593' => 'cav', 'Haze_06448' => 'cav', 'Haze_09427' => 'cav', 'Haze_12022' => 'cav', 'Haze_17612' => 'cav', 'Haze_17928' => 'cav', 'Hma1.2p1_0032F.1_g019250' => 'hma', 'Hma1.2p1_0163F.1_g072690' => 'hma', 'Hma1.2p1_0265F.1_g106710' => 'hma', 'Hma1.2p1_0286F.1_g113970' => 'hma', 'Hma1.2p1_0363F.1_g136640' => 'hma', 'Hma1.2p1_0584F.1_g183470' => 'hma', 'Hma1.2p1_0885F.1_g232570' => 'hma', 'HPP92_006022' => 'vpl', 'HPP92_007320' => 'vpl', 'HPP92_011521' => 'vpl', 'HPP92_019387' => 'vpl', 'HPP92_024038' => 'vpl', 'Hund05891' => 'sun', 'Hund06450' => 'sun', 'Hund12053' => 'sun', 'Hund16800' => 'sun', 'Hund21222' => 'sun', 'Hund22896' => 'sun', 'Hund23746' => 'sun', 'Hund27083' => 'sun', 'Lalb_Chr02g0141831' => 'lal', 'Lalb_Chr02g0141841' => 'lal', 'Lalb_Chr05g0220411' => 'lal', 'Lalb_Chr06g0162081' => 'lal', 'Lalb_Chr09g0327651' => 'lal', 'Lalb_Chr13g0295051' => 'lal', 'Lalb_Chr15g0086801' => 'lal', 'Lalb_Chr16g0383781' => 'lal', 'Lalb_Chr16g0383791' => 'lal', 'Lalb_Chr18g0055441' => 'lal', 'Lalb_Chr18g0059611' => 'lal', 'Lalb_Chr20g0109661' => 'lal', 'Lalb_Chr20g0109831' => 'lal', 'Lalb_Chr20g0121871' => 'lal', 'Lalb_Chr22g0355361' => 'lal', 'Lalb_Chr25g0286371' => 'lal', 'Lj1A1187G43' => 'lonja', 'Lj1A1205T50' => 'lonja', 'Lj1A800G33' => 'lonja', 'Lj1C1187T7' => 'lonja', 'Lj1C843T11' => 'lonja', 'Lj1g0010940' => 'lja', 'Lj2A288T69' => 'lonja', 'Lj3g0024276' => 'lja', 'Lj4A47T76' => 'lonja', 'Lj4g0005805' => 'lja', 'Lj4g0006097' => 'lja', 'Lj4g0008528' => 'lja', 'Lj4g0024907' => 'lja', 'Lj5g0012472' => 'lja', 'Lj5g0018648' => 'lja', 'Lj6C789G1' => 'lonja', 'Lj6g0004000' => 'lja', 'Lj7A292G67' => 'lonja', 'Lj7A292T64' => 'lonja', 'Lj9A400T58' => 'lonja', 'Lsat_1_v5_gn_1_126181' => 'lsa', 'Lsat_1_v5_gn_4_123041' => 'lsa', 'Lsat_1_v5_gn_4_133620' => 'lsa', 'Lsat_1_v5_gn_4_53221' => 'lsa', 'Lsat_1_v5_gn_4_71961' => 'lsa', 'Lsat_1_v5_gn_7_105241' => 'lsa', 'Lsat_1_v5_gn_7_21361' => 'lsa', 'Lsat_1_v5_gn_7_28860' => 'lsa', 'Lsat_1_v5_gn_7_31260' => 'lsa', 'Lsat_1_v5_gn_8_52801' => 'lsa', 'Manes.02G191400' => 'mes', 'Manes.03G110100' => 'mes', 'Manes.04G071100' => 'mes', 'Manes.05G100500' => 'mes', 'Manes.05G164700' => 'mes', 'Manes.15G087000' => 'mes', 'Manes.15G121500' => 'mes', 'Manes.16G028300' => 'mes', 'Manes.17G046100' => 'mes', 'Manes.17G069800' => 'mes', 'Manes.18G100500' => 'mes', 'Mapoly0002s0109' => 'mpo', 'Mapoly0024s0007' => 'mpo', 'Mapoly0089s0032' => 'mpo', 'MBI04_g42241_MAGBIO' => 'mbi', 'MBI05_g11988_MAGBIO' => 'mbi', 'MBI05_g35452_MAGBIO' => 'mbi', 'MBI07_g30179_MAGBIO' => 'mbi', 'MBI07_g35859_MAGBIO' => 'mbi', 'MBI07_g35860_MAGBIO' => 'mbi', 'MBI07_g37166_MAGBIO' => 'mbi', 'MBI08_g18172_MAGBIO' => 'mbi', 'MBI09_g08441_MAGBIO' => 'mbi', 'MBI13_g01676_MAGBIO' => 'mbi', 'MBI14_g42955_MAGBIO' => 'mbi', 'MBI16_g13161_MAGBIO' => 'mbi', 'MBI17_g27204_MAGBIO' => 'mbi', 'MBI19_g21595_MAGBIO' => 'mbi', 'MD00G1148400' => 'mdo', 'MD02G1301200' => 'mdo', 'MD03G1227800' => 'mdo', 'MD05G1041100' => 'mdo', 'MD05G1124800' => 'mdo', 'MD05G1284000' => 'mdo', 'MD05G1338800' => 'mdo', 'MD05G1338900' => 'mdo', 'MD07G1022800' => 'mdo', 'MD10G1047500' => 'mdo', 'MD10G1127500' => 'mdo', 'MD10G1262300' => 'mdo', 'MD10G1293800' => 'mdo', 'MD16G1074300' => 'mdo', 'Medtr1g021670' => 'mtr', 'Medtr1g096320' => 'mtr', 'Medtr2g013690' => 'mtr', 'Medtr2g019450' => 'mtr', 'Medtr2g085170' => 'mtr', 'Medtr4g088785' => 'mtr', 'Medtr8g055930' => 'mtr', 'Medtr8g085850' => 'mtr', 'MELO3C002605.2' => 'cme', 'MELO3C003891.2' => 'cme', 'MELO3C004012.2' => 'cme', 'MELO3C007134.2' => 'cme', 'MELO3C008118.2' => 'cme', 'MELO3C016700.2' => 'cme', 'MELO3C024127.2' => 'cme', 'MELO3C033361.2' => 'cme', 'MELO3C033362.2' => 'cme', 'Migut.C00430' => 'egut', 'Migut.C01246' => 'egut', 'Migut.E00101' => 'egut', 'Migut.H01486' => 'egut', 'Migut.H01939' => 'egut', 'Migut.K00360' => 'egut', 'Migut.M00910' => 'egut', 'Migut.M01139' => 'egut', 'Migut.N02677' => 'egut', 'MSTRG.13252' => 'ama', 'MSTRG.14701' => 'ama', 'MSTRG.1521' => 'ama', 'MSTRG.15884' => 'ama', 'MSTRG.16242' => 'ama', 'MSTRG.22285' => 'ama', 'MSTRG.22444' => 'ama', 'MSTRG.2349' => 'ama', 'MSTRG.26308' => 'ama', 'MSTRG.28296' => 'ama', 'MSTRG.9895' => 'ama', 'Nitab4.5_0000110g0060' => 'nta', 'Nitab4.5_0000420g0130' => 'nta', 'Nitab4.5_0000422g0030' => 'nta', 'Nitab4.5_0000560g0180' => 'nta', 'Nitab4.5_0000703g0100' => 'nta', 'Nitab4.5_0000786g0200' => 'nta', 'Nitab4.5_0001336g0020' => 'nta', 'Nitab4.5_0001796g0030' => 'nta', 'Nitab4.5_0003348g0060' => 'nta', 'Nitab4.5_0003698g0040' => 'nta', 'Nitab4.5_0003942g0090' => 'nta', 'Nitab4.5_0004775g0070' => 'nta', 'Nitab4.5_0004864g0030' => 'nta', 'Nitab4.5_0005615g0020' => 'nta', 'Nitab4.5_0009288g0030' => 'nta', 'Nitab4.5_0009341g0010' => 'nta', 'Nitab4.5_0009535g0010' => 'nta', 'Nn1g03995' => 'nnu', 'Nn1g04100' => 'nnu', 'Nn1g06530' => 'nnu', 'Nn3g16404' => 'nnu', 'Nn3g17212' => 'nnu', 'Nn3g20776' => 'nnu', 'Nn3g21923' => 'nnu', 'Nn5g27737' => 'nnu', 'Nn5g29461' => 'nnu', 'Nn7g38355' => 'nnu', 'Nn8g39873' => 'nnu', 'Oeu000548.2' => 'oeu', 'Oeu004672.1' => 'oeu', 'Oeu015605.2' => 'oeu', 'Oeu016092.1' => 'oeu', 'Oeu017879.3' => 'oeu', 'Oeu024910.1' => 'oeu', 'Oeu028965.1' => 'oeu', 'Oeu031269.1' => 'oeu', 'Oeu031270.1' => 'oeu', 'Oeu032535.1' => 'oeu', 'Oeu034151.1' => 'oeu', 'Oeu034152.1' => 'oeu', 'Oeu034588.2' => 'oeu', 'Oeu050846.1' => 'oeu', 'Oeu050849.2' => 'oeu', 'Oeu051063.2' => 'oeu', 'Oeu052368.1' => 'oeu', 'Oeu052370.1' => 'oeu', 'Os01g0210400' => 'osa', 'Os01g0304300' => 'osa', 'Os01g0749100' => 'osa', 'Os02g0745800' => 'osa', 'Os03g0769050' => 'osa', 'Os05g0531500' => 'osa', 'Os06g0724300' => 'osa', 'Os11g0198100' => 'osa', 'Peaxi162Scf00069g01425' => 'pax', 'Peaxi162Scf00280g00811' => 'pax', 'Peaxi162Scf00310g00615' => 'pax', 'Peaxi162Scf00362g00542' => 'pax', 'Peaxi162Scf00461g00310' => 'pax', 'Peaxi162Scf00530g00118' => 'pax', 'Peaxi162Scf00541g00057' => 'pax', 'Peaxi162Scf00661g00017' => 'pax', 'Peaxi162Scf00926g00027' => 'pax', 'Peaxi162Scf01064g00263' => 'pax', 'Peaxi162Scf01211g00135' => 'pax', 'PGR004G2336' => 'pgr', 'PGR042G0327' => 'pgr', 'PGR042G1957' => 'pgr', 'PGR042G2003' => 'pgr', 'PGR042G3929' => 'pgr', 'PGR083G1137' => 'pgr', 'PGR083G1364' => 'pgr', 'PGSC0003DMG400003381' => 'stu', 'PGSC0003DMG400003417' => 'stu', 'PGSC0003DMG400008981' => 'stu', 'PGSC0003DMG400012417' => 'stu', 'PGSC0003DMG400012823' => 'stu', 'PGSC0003DMG400016885' => 'stu', 'PGSC0003DMG400022812' => 'stu', 'PGSC0003DMG400029726' => 'stu', 'PGSC0003DMG401009243' => 'stu', 'PGSC0003DMG401031505' => 'stu', 'PGSC0003DMG402031505' => 'stu', 'Phvul.001G017600' => 'pvu', 'Phvul.002G193500' => 'pvu', 'Phvul.002G228900' => 'pvu', 'Phvul.002G236800' => 'pvu', 'Phvul.003G049500' => 'pvu', 'Phvul.005G072000' => 'pvu', 'Phvul.006G164800' => 'pvu', 'Phvul.006G185100' => 'pvu', 'Phvul.007G090000' => 'pvu', 'Potri.001G399800' => 'ptr', 'Potri.002G149900' => 'ptr', 'Potri.004G044100' => 'ptr', 'Potri.004G177600' => 'ptr', 'Potri.009G138000' => 'ptr', 'Potri.010G094000' => 'ptr', 'Potri.011G053000' => 'ptr', 'Potri.011G119300' => 'ptr', 'Potri.013G113700' => 'ptr', 'Potri.018G107800' => 'ptr', 'Potri.019G084100' => 'ptr', 'Pp3c14_23720' => 'ppa', 'Pp3c16_6340' => 'ppa', 'Pp3c23_13420' => 'ppa', 'Pp3c24_2740' => 'ppa', 'Pp3c25_860' => 'ppa', 'Pp3c8_21750' => 'ppa', 'Prupe.1G273000' => 'ppe', 'Prupe.1G273700' => 'ppe', 'Prupe.1G274100' => 'ppe', 'Prupe.2G023300' => 'ppe', 'Prupe.4G048000' => 'ppe', 'Prupe.4G080400' => 'ppe', 'Prupe.4G181200' => 'ppe', 'Prupe.8G056900' => 'ppe', 'Prupe.8G168700' => 'ppe', 'Psat1g189080' => 'psa', 'Psat1g204760' => 'psa', 'Psat4g175560' => 'psa', 'Psat4g177720' => 'psa', 'Psat5g244240' => 'psa', 'Psat6g010720' => 'psa', 'Psat6g187200' => 'psa', 'Psat7g072040' => 'psa', 'PSO017G3501' => 'pso', 'PSO063G2148' => 'pso', 'PSO063G5608' => 'pso', 'PSO210G6392' => 'pso', 'PSO541G2319' => 'pso', 'PSO541G2836' => 'pso', 'PSO541G4012' => 'pso', 'PSO541G6253' => 'pso', 'PSO675G0580' => 'pso', 'PSO675G0856' => 'pso', 'PSO675G5635' => 'pso', 'PSO675G9157' => 'pso', 'PSO832G1660' => 'pso', 'PSO832G1969' => 'pso', 'QL02p007186' => 'qlo', 'QL02p033904' => 'qlo', 'QL03p064391' => 'qlo', 'QL05p040593' => 'qlo', 'QL05p058242' => 'qlo', 'QL08p021825' => 'qlo', 'QL11p004981' => 'qlo', 'RcHm_v2.0_Chr1g0318301' => 'rch', 'RcHm_v2.0_Chr4g0418501' => 'rch', 'RcHm_v2.0_Chr4g0439971' => 'rch', 'RcHm_v2.0_Chr5g0008541' => 'rch', 'RcHm_v2.0_Chr5g0014101' => 'rch', 'RcHm_v2.0_Chr5g0014131' => 'rch', 'RcHm_v2.0_Chr5g0033621' => 'rch', 'RcHm_v2.0_Chr6g0272041' => 'rch', 'RcHm_v2.0_Chr6g0278831' => 'rch', 'Rhsim02G0130400' => 'rsi', 'Rhsim02G0171100' => 'rsi', 'Rhsim05G0053000' => 'rsi', 'Rhsim05G0053100' => 'rsi', 'Rhsim06G0096500' => 'rsi', 'Rhsim06G0096600' => 'rsi', 'Rhsim06G0199100' => 'rsi', 'Rhsim12G0062300' => 'rsi', 'Rhsim12G0062800' => 'rsi', 'Sabra02G0118600' => 'sbr', 'Sabra04G0027300' => 'sbr', 'Sabra04G0119500' => 'sbr', 'Sabra08G0112500' => 'sbr', 'Sabra11G0036800' => 'sbr', 'Sabra11G0103800' => 'sbr', 'Sabra13G0096300' => 'sbr', 'Sabra16G0262300' => 'sbr', 'Sabra18G0091700' => 'sbr', 'Sabra19G0095400' => 'sbr', 'SalBow6G3080' => 'sbo', 'SalBow7G1157' => 'sbo', 'SalBow7G2123' => 'sbo', 'SalBow7G2285' => 'sbo', 'SalBow7G3537' => 'sbo', 'SalBow8G2947' => 'sbo', 'SalBow8G4463' => 'sbo', 'SalBow8G5466' => 'sbo', 'Sc01g0001750' => 'sci', 'Sc02g0006640' => 'sci', 'Sc02g0006670' => 'sci', 'Sc04g0008220' => 'sci', 'Sc05g0006190' => 'sci', 'Sc08g0002760' => 'sci', 'Sc17g0006170' => 'sci', 'Sc22g0002050' => 'sci', 'Sc23g0001190' => 'sci', 'Sc24g0000980' => 'sci', 'Sed0006245' => 'sed', 'Sed0007543' => 'sed', 'Sed0009411' => 'sed', 'Sed0010765' => 'sed', 'Sed0012944' => 'sed', 'Sed0014682' => 'sed', 'Sed0016174' => 'sed', 'Sed0016796' => 'sed', 'Sed0020317' => 'sed', 'Sed0021467' => 'sed', 'SEGI_01316' => 'sgi', 'SEGI_03374' => 'sgi', 'SEGI_16265' => 'sgi', 'SEGI_18569' => 'sgi', 'SEGI_20351' => 'sgi', 'SEGI_26395' => 'sgi', 'SEGI_29469' => 'sgi', 'SEGI_34771' => 'sgi', 'SEGI_36769' => 'sgi', 'SEGI_37139' => 'sgi', 'SGA_v2.0_scaffold100G29687' => 'sas', 'SGA_v2.0_scaffold118G32472' => 'sas', 'SGA_v2.0_scaffold14G07051' => 'sas', 'SGA_v2.0_scaffold183G39845' => 'sas', 'SGA_v2.0_scaffold1G00174' => 'sas', 'SGA_v2.0_scaffold22G09714' => 'sas', 'SGA_v2.0_scaffold333G48992' => 'sas', 'SGA_v2.0_scaffold46G17491' => 'sas', 'SGA_v2.0_scaffold49G18294' => 'sas', 'SGA_v2.0_scaffold63G21658' => 'sas', 'SHI01741' => 'shi', 'SHI05771' => 'shi', 'SHI18077' => 'shi', 'SHI20525' => 'shi', 'SHI20527' => 'shi', 'SHI20528' => 'shi', 'SMO172G0185' => 'smo', 'SMO198G0020' => 'smo', 'SMO351G0006' => 'smo', 'SMO356G0118' => 'smo', 'SMO358G0296' => 'smo', 'SMO367G0079' => 'smo', 'SMO367G1277' => 'smo', 'Solyc01g014220.3' => 'sly', 'Solyc01g111770.2' => 'sly', 'Solyc02g078180.3' => 'sly', 'Solyc03g006430.3' => 'sly', 'Solyc03g006456.1' => 'sly', 'Solyc03g079860.2' => 'sly', 'Solyc04g079770.3' => 'sly', 'Solyc05g007430.4' => 'sly', 'Solyc07g063150.3' => 'sly', 'Solyc08g016620.3' => 'sly', 'Solyc09g057590.3' => 'sly', 'Solyc09g057600.1' => 'sly', 'Solyc10g009050.3' => 'sly', 'Solyc11g017420.2' => 'sly', 'Sopen01g053810' => 'spe', 'Sopen02g023040' => 'spe', 'Sopen03g002440' => 'spe', 'Sopen04g033350' => 'spe', 'Sopen05g003310' => 'spe', 'Sopen07g004050' => 'spe', 'Sopen07g031340' => 'spe', 'Sopen08g006990' => 'spe', 'Sopen10g004830' => 'spe', 'Sopen11g009370' => 'spe', 'Sp1g24450' => 'spa', 'Sp1g29670' => 'spa', 'Sp1g39600' => 'spa', 'Sp2g11080' => 'spa', 'Sp2g13970' => 'spa', 'Sp4g16130' => 'spa', 'Sp6g13080' => 'spa', 'Sp7g37270' => 'spa', 'TAR371G0065' => 'tar', 'TAR376G0340' => 'tar', 'TAR376G0435' => 'tar', 'TAR381G0002' => 'tar', 'TAR381G1236' => 'tar', 'TAR624G0055' => 'tar', 'TAR624G0324' => 'tar', 'TAR624G0696' => 'tar', 'TAR624G0906' => 'tar', 'TAR625G0107' => 'tar', 'TAR626G0015' => 'tar', 'TAR626G1356' => 'tar', 'TAR627G0888' => 'tar', 'TAR628G0399' => 'tar', 'TAR628G1327' => 'tar', 'TAR629G2831' => 'tar', 'TAR629G2874' => 'tar', 'TAR633G1432' => 'tar', 'TAR633G2771' => 'tar', 'THA.LOC104803394' => 'tha', 'THA.LOC104805153' => 'tha', 'THA.LOC104806784' => 'tha', 'THA.LOC104810473' => 'tha', 'THA.LOC104813100' => 'tha', 'THA.LOC104814215' => 'tha', 'THA.LOC104815554' => 'tha', 'THA.LOC104820544' => 'tha', 'THA.LOC104824754' => 'tha', 'THA.LOC104827717' => 'tha', 'Thecc.02G031400' => 'tca', 'Thecc.02G055900' => 'tca', 'Thecc.02G350800' => 'tca', 'Thecc.06G150900' => 'tca', 'Thecc.06G186600' => 'tca', 'Thecc.07G089600' => 'tca', 'Thecc.08G020400' => 'tca', 'Thecc.08G182100' => 'tca', 'Thhalv10000873m.g' => 'esa', 'Thhalv10004185m.g' => 'esa', 'Thhalv10006981m.g' => 'esa', 'Thhalv10007204m.g' => 'esa', 'Thhalv10011374m.g' => 'esa', 'Thhalv10013482m.g' => 'esa', 'Thhalv10017801m.g' => 'esa', 'Thhalv10024983m.g' => 'esa', 'TPR.G12072' => 'tpr', 'TPR.G15769' => 'tpr', 'TPR.G16504' => 'tpr', 'TPR.G16506' => 'tpr', 'TPR.G24345' => 'tpr', 'TPR.G26666' => 'tpr', 'TPR.G27320' => 'tpr', 'TPR.G31819' => 'tpr', 'TPR.G38879' => 'tpr', 'TPR.G39015' => 'tpr', 'TPR.G8819' => 'tpr', 'TWI09G0924' => 'twi', 'TWI12G0811' => 'twi', 'TWI12G1294' => 'twi', 'TWI31G0150' => 'twi', 'TWI36G1262' => 'twi', 'TWI38G1287' => 'twi', 'TWI38G1633' => 'twi', 'TWI38G1982' => 'twi', 'TWI39G0116' => 'twi', 'TWI60G1011' => 'twi', 'TWI63G0171' => 'twi', 'TWI73G0839' => 'twi', 'TWI79G1511' => 'twi', 'unitig_0.g915' => 'ugi', 'unitig_0.g916' => 'ugi', 'unitig_21.g20219' => 'ugi', 'unitig_21.g20416' => 'ugi', 'unitig_578.g16132' => 'ugi', 'unitig_578.g16718' => 'ugi', 'unitig_62.g23481' => 'ugi', 'unitig_744.g24535' => 'ugi', 'unitig_749.g13525' => 'ugi', 'vmacro01248' => 'vma', 'vmacro02290' => 'vma', 'vmacro10946' => 'vma', 'vmacro11865' => 'vma', 'vmacro12493' => 'vma', 'vmacro17322' => 'vma', 'vmacro21599' => 'vma', 'vmacro23041' => 'vma', 'VMungo0251G0004' => 'vmu', 'VMungo0251G2639' => 'vmu', 'VMungo0251G2967' => 'vmu', 'VMungo0540G0864' => 'vmu', 'VMungo0540G1569' => 'vmu', 'VMungo0647G0317' => 'vmu', 'VMungo0720G1373' => 'vmu', 'VMungo0720G1508' => 'vmu', 'VMungo1080G0485' => 'vmu', 'VMungo1215G3177' => 'vmu', 'Zm00001eb112600' => 'zma', 'Zm00001eb120220' => 'zma', 'Zm00001eb153240' => 'zma', 'Zm00001eb168880' => 'zma', 'Zm00001eb213920' => 'zma', 'Zm00001eb228280' => 'zma', 'Zm00001eb254580' => 'zma', 'Zm00001eb272180' => 'zma', 'Zm00001eb293190' => 'zma', 'Zm00001eb322930' => 'zma', 'Zm00001eb353360' => 'zma', 'Zm00001eb353390' => 'zma', 'Zm00001eb353430' => 'zma', 'Zm00001eb353440' => 'zma', 'Zm00001eb353780' => 'zma' ), 'gf_id' => 'HOM05D000499', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000499' ), 'data_identifier' => 'HOM05D000499', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000499', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1066', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p29780' => 'bna', 'A02p33180' => 'bna', 'A03p16470' => 'bna', 'A03p66010' => 'bna', 'A04p25970' => 'bna', 'A06p01270' => 'bna', 'A06p46080' => 'bna', 'A07p11400' => 'bna', 'A08p01840' => 'bna', 'A08p08230' => 'bna', 'A08p25740' => 'bna', 'A09p32070' => 'bna', 'A09p37830' => 'bna', 'A09p42840' => 'bna', 'A09p42850' => 'bna', 'Aa31LG10G2060' => 'aar', 'Aa31LG2G7410' => 'aar', 'Aa31LG6G10200' => 'aar', 'Aa31LG6G16680' => 'aar', 'Aa31LG6G8470' => 'aar', 'Aa31LG9G12730' => 'aar', 'Aa31LG9G13680' => 'aar', 'Aa31LG9G14920' => 'aar', 'Aa31LG9G6650' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4977' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5467' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3254' => 'aag', 'Actinidia02578' => 'ach', 'Actinidia07693' => 'ach', 'Actinidia08413' => 'ach', 'Actinidia08414' => 'ach', 'Actinidia15289' => 'ach', 'Actinidia19871' => 'ach', 'Actinidia21475' => 'ach', 'Actinidia22576' => 'ach', 'Actinidia28327' => 'ach', 'Actinidia32491' => 'ach', 'Actinidia39463' => 'ach', 'Actinidia39571' => 'ach', 'Ah.01g013750' => 'amhyb', 'Ah.01g023210' => 'amhyb', 'Ah.04g164850' => 'amhyb', 'Ah.05g178060' => 'amhyb', 'Ah.07g204270' => 'amhyb', 'Ah.07g208480' => 'amhyb', 'Ah.09g237410' => 'amhyb', 'Ah.14g089460' => 'amhyb', 'AL1G41790' => 'aly', 'AL1G49050' => 'aly', 'AL1G53810' => 'aly', 'AL1G61400' => 'aly', 'AL4G18580' => 'aly', 'AL5G12510' => 'aly', 'AL5G12540' => 'aly', 'AL6G43230' => 'aly', 'AL7G10370' => 'aly', 'AL7G19250' => 'aly', 'AL8G12240' => 'aly', 'AL8G18540' => 'aly', 'Aqoxy1G02409' => 'aox', 'Aqoxy2G03993' => 'aox', 'Aqoxy3G03357' => 'aox', 'Aqoxy4G00785' => 'aox', 'Aqoxy5G02598' => 'aox', 'Aqoxy6G00132' => 'aox', 'Aqoxy7G01776' => 'aox', 'Aqoxy7G02316' => 'aox', 'Aqoxy7G03973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.12AFKW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B8730' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27IQR1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3F75VG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3RE0GA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41TCQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.527VTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FIR39' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5W8UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DA38EV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ63HS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H1I32C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HC27T5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4M8AP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7N3CZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9UVDZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LS1NQA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT1D4B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SKC4TM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCFV76' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF9Q1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQWD9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1ZM88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WE07RT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YCK7VH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJE6Q6' => 'arhy', 'AT1G28240' => 'ath', 'AT1G34550' => 'ath', 'AT1G53040' => 'ath', 'AT2G02910' => 'ath', 'AT4G09630' => 'ath', 'AT4G38500' => 'ath', 'AT5G42660' => 'ath', 'AT5G46220' => 'ath', 'ATR0152G026' => 'atr', 'ATR0564G343' => 'atr', 'ATR0706G151' => 'atr', 'ATR0733G207' => 'atr', 'ATR0751G234' => 'atr', 'ATR0807G048' => 'atr', 'ATR1091G084' => 'atr', 'Atru.chr10.1229' => 'acertr', 'Atru.chr10.1230' => 'acertr', 'Atru.chr10.1874' => 'acertr', 'Atru.chr11.1808' => 'acertr', 'Atru.chr13.1795' => 'acertr', 'Atru.chr13.570' => 'acertr', 'Atru.chr2.2608' => 'acertr', 'Atru.chr2.2609' => 'acertr', 'Atru.chr5.3428' => 'acertr', 'Atru.chr8.1171' => 'acertr', 'AUR62004651' => 'cqu', 'AUR62008675' => 'cqu', 'AUR62010014' => 'cqu', 'AUR62013004' => 'cqu', 'AUR62014825' => 'cqu', 'AUR62015015' => 'cqu', 'AUR62015151' => 'cqu', 'AUR62017020' => 'cqu', 'AUR62019422' => 'cqu', 'AUR62023570' => 'cqu', 'AUR62025571' => 'cqu', 'AUR62029098' => 'cqu', 'AUR62033863' => 'cqu', 'AUR62034296' => 'cqu', 'AUR62040075' => 'cqu', 'BcaB02g07334' => 'bca', 'BcaB02g10575' => 'bca', 'BcaB03g12119' => 'bca', 'BcaB03g12120' => 'bca', 'BcaB03g13945' => 'bca', 'BcaB04g17123' => 'bca', 'BcaB04g17867' => 'bca', 'BcaB04g19839' => 'bca', 'BcaB07g30317' => 'bca', 'BcaB07g32432' => 'bca', 'BcaB07g33362' => 'bca', 'BcaB08g36611' => 'bca', 'BcaC01g00028' => 'bca', 'BcaC01g01356' => 'bca', 'BcaC01g02034' => 'bca', 'BcaC01g06051' => 'bca', 'BcaC03g16839' => 'bca', 'BcaC03g17176' => 'bca', 'BcaC05g26829' => 'bca', 'BcaC06g31490' => 'bca', 'BcaC06g35344' => 'bca', 'BcaC06g36570' => 'bca', 'BcaC07g37537' => 'bca', 'BcaC08g43491' => 'bca', 'BcaC08g43773' => 'bca', 'BcaNung00234' => 'bca', 'BcaNung01982' => 'bca', 'BcaNung03707' => 'bca', 'BcaNung06454' => 'bca', 'BolC2t10762H' => 'bol', 'BolC2t11191H' => 'bol', 'BolC3t14322H' => 'bol', 'BolC3t19747H' => 'bol', 'BolC3t21425H' => 'bol', 'BolC4t27800H' => 'bol', 'BolC5t31423H' => 'bol', 'BolC6t35951H' => 'bol', 'BolC6t36282H' => 'bol', 'BolC7t40678H' => 'bol', 'BolC7t40679H' => 'bol', 'BolC7t42222H' => 'bol', 'BolC7t43492H' => 'bol', 'BolC7t46785H' => 'bol', 'BolC8t47853H' => 'bol', 'BolC9t56805H' => 'bol', 'BraA02t08000Z' => 'bra', 'BraA02t08341Z' => 'bra', 'BraA03t10936Z' => 'bra', 'BraA03t15657Z' => 'bra', 'BraA04t18100Z' => 'bra', 'BraA05t20523Z' => 'bra', 'BraA06t23353Z' => 'bra', 'BraA06t27473Z' => 'bra', 'BraA06t27769Z' => 'bra', 'BraA07t28928Z' => 'bra', 'BraA08t32236Z' => 'bra', 'BraA08t32841Z' => 'bra', 'BraA08t34524Z' => 'bra', 'BraA09t38742Z' => 'bra', 'BraA09t39295Z' => 'bra', 'C02p47180' => 'bna', 'C02p50990' => 'bna', 'C03p19360' => 'bna', 'C03p74950' => 'bna', 'C03p91000' => 'bna', 'C04p63260' => 'bna', 'C05p27050' => 'bna', 'C06p08750' => 'bna', 'C06p11490' => 'bna', 'C07p02820' => 'bna', 'C07p17180' => 'bna', 'C07p29440' => 'bna', 'C07p63730' => 'bna', 'C09p39260' => 'bna', 'CAN.G1164.34' => 'can', 'CAN.G1164.39' => 'can', 'CAN.G1530.3' => 'can', 'CAN.G162.61' => 'can', 'CAN.G176.6' => 'can', 'CAN.G289.49' => 'can', 'CAN.G370.21' => 'can', 'CAN.G370.22' => 'can', 'CAN.G371.117' => 'can', 'CAN.G58.37' => 'can', 'CAN.G588.98' => 'can', 'CANSAT21G2266' => 'cansat', 'CANSAT25G2799' => 'cansat', 'CANSAT35G0862' => 'cansat', 'CANSAT35G1704' => 'cansat', 'CANSAT35G1760' => 'cansat', 'CANSAT56G3971' => 'cansat', 'CANSAT56G4116' => 'cansat', 'CANSAT80G1259' => 'cansat', 'CARHR027730' => 'chi', 'CARHR033880' => 'chi', 'CARHR043270' => 'chi', 'CARHR145330' => 'chi', 'CARHR145340' => 'chi', 'CARHR175570' => 'chi', 'CARHR181570' => 'chi', 'CARHR258470' => 'chi', 'CARHR260490' => 'chi', 'CARHR294220' => 'chi', 'Carub.0001s2668' => 'cru', 'Carub.0001s3257' => 'cru', 'Carub.0001s4220' => 'cru', 'Carub.0005s0179' => 'cru', 'Carub.0006s2807' => 'cru', 'Carub.0007s0039' => 'cru', 'Carub.0008s0169' => 'cru', 'Carub.0008s0636' => 'cru', 'Ca_00338_v3' => 'car', 'Ca_00542_v3' => 'car', 'Ca_01844_v3' => 'car', 'Ca_10611_v3' => 'car', 'Ca_13326_v3' => 'car', 'Ca_17944_v3' => 'car', 'Ca_18546_v3' => 'car', 'Ca_24219_v3' => 'car', 'Ca_29972_v3' => 'car', 'CBR_g3681' => 'cbr', 'CBR_g40021' => 'cbr', 'Cc01_g08140' => 'ccan', 'Cc02_g13410' => 'ccan', 'Cc02_g37480' => 'ccan', 'Cc05_g12030' => 'ccan', 'Cc09_g03370' => 'ccan', 'Cc09_g10300' => 'ccan', 'Cc10_g03530' => 'ccan', 'Cc10_g11380' => 'ccan', 'CDE01G0176' => 'cde', 'CDE02G0675' => 'cde', 'CDE02G0942' => 'cde', 'CDE02G1153' => 'cde', 'CDE02G4177' => 'cde', 'CDE04G2117' => 'cde', 'CDE04G2736' => 'cde', 'CDE08G1161' => 'cde', 'CDE09G1238' => 'cde', 'Cfa000467' => 'cfa', 'Cfa000947' => 'cfa', 'Cfa004969' => 'cfa', 'Cfa005284' => 'cfa', 'Cfa008993' => 'cfa', 'Cfa018187' => 'cfa', 'Cfa018454' => 'cfa', 'Cfa020585' => 'cfa', 'Ciclev10000424m.g' => 'ccl', 'Ciclev10003605m.g' => 'ccl', 'Ciclev10007828m.g' => 'ccl', 'Ciclev10014620m.g' => 'ccl', 'Ciclev10015169m.g' => 'ccl', 'Ciclev10018291m.g' => 'ccl', 'Ciclev10028256m.g' => 'ccl', 'Ciclev10033822m.g' => 'ccl', 'CiPaw.05G060300' => 'cil', 'CiPaw.05G085000' => 'cil', 'CiPaw.06G083700' => 'cil', 'CiPaw.06G120300' => 'cil', 'CiPaw.09G060500' => 'cil', 'CiPaw.09G123800' => 'cil', 'CiPaw.11G169700' => 'cil', 'CiPaw.12G118300' => 'cil', 'CiPaw.15G071000' => 'cil', 'CiPaw.15G081900' => 'cil', 'ClCG01G024610' => 'cla', 'ClCG03G006070' => 'cla', 'ClCG05G019250' => 'cla', 'ClCG09G009500' => 'cla', 'ClCG11G008200' => 'cla', 'ClCG11G018080' => 'cla', 'COL.COLO4_17373' => 'col', 'COL.COLO4_22994' => 'col', 'COL.COLO4_26389' => 'col', 'COL.COLO4_27170' => 'col', 'COL.COLO4_31074' => 'col', 'COL.COLO4_31465' => 'col', 'COL.COLO4_36438' => 'col', 'COL.COLO4_36439' => 'col', 'Cpa.g.c38781' => 'cpa', 'Cpa.g.sc128.12' => 'cpa', 'Cpa.g.sc166.7' => 'cpa', 'Cpa.g.sc166.8' => 'cpa', 'Cpa.g.sc20.111' => 'cpa', 'Cpa.g.sc27.31' => 'cpa', 'Cpa.g.sc64.36' => 'cpa', 'Cpa.g.sc64.37' => 'cpa', 'Cpa.g.sc66.49' => 'cpa', 'Cpa.g.sc80.64' => 'cpa', 'CsaV3_1G012320' => 'csa', 'CsaV3_2G008480' => 'csa', 'CsaV3_2G033450' => 'csa', 'CsaV3_3G044830' => 'csa', 'CsaV3_4G033710' => 'csa', 'CsaV3_6G051730' => 'csa', 'CsaV3_7G025350' => 'csa', 'CSS0001067' => 'camsi', 'CSS0005996' => 'camsi', 'CSS0006590' => 'camsi', 'CSS0009673' => 'camsi', 'CSS0010201' => 'camsi', 'CSS0010549' => 'camsi', 'CSS0011364' => 'camsi', 'CSS0014473' => 'camsi', 'CSS0014961' => 'camsi', 'CSS0020191' => 'camsi', 'CSS0021165' => 'camsi', 'CSS0022306' => 'camsi', 'CSS0030591' => 'camsi', 'CSS0030696' => 'camsi', 'CSS0032653' => 'camsi', 'CSS0037487' => 'camsi', 'CSS0041102' => 'camsi', 'CSS0041261' => 'camsi', 'CSS0046246' => 'camsi', 'CSS0049256' => 'camsi', 'DCAR_004075' => 'dca', 'DCAR_011538' => 'dca', 'DCAR_019553' => 'dca', 'DCAR_020952' => 'dca', 'DCAR_021739' => 'dca', 'DCAR_027407' => 'dca', 'DCAR_027913' => 'dca', 'DCAR_028066' => 'dca', 'Dinv05899' => 'din', 'Dinv07563' => 'din', 'Dinv08010' => 'din', 'Dinv14125' => 'din', 'Dinv20172' => 'din', 'Dinv30743' => 'din', 'Dinv31229' => 'din', 'Dinv34162' => 'din', 'Dinv36028' => 'din', 'Dinv39368' => 'din', 'Dinv40565' => 'din', 'Dinv41706' => 'din', 'Duzib052G0089' => 'dzi', 'Duzib116G0641' => 'dzi', 'Duzib132G0069' => 'dzi', 'Duzib132G1219' => 'dzi', 'Duzib147G0278' => 'dzi', 'Duzib160G0480' => 'dzi', 'Duzib170G0661' => 'dzi', 'Duzib177G0591' => 'dzi', 'Duzib187G1353' => 'dzi', 'Duzib192G0858' => 'dzi', 'Duzib192G0883' => 'dzi', 'Duzib213G0506' => 'dzi', 'Duzib235G0289' => 'dzi', 'Duzib251G0422' => 'dzi', 'ECA232G3898' => 'eca', 'ECA233G5950' => 'eca', 'ECA234G1699' => 'eca', 'ECA234G2421' => 'eca', 'ECA236G0426' => 'eca', 'ECA236G4331' => 'eca', 'ECA248G2573' => 'eca', 'EL10Ac1g00077' => 'bvu', 'EL10Ac1g01746' => 'bvu', 'EL10Ac2g03464' => 'bvu', 'EL10Ac4g08176' => 'bvu', 'EL10Ac7g17521' => 'bvu', 'EL10Ac8g20386' => 'bvu', 'EL10Ac9g21343' => 'bvu', 'EL10Ac9g22688' => 'bvu', 'Eucgr.B03434' => 'egr', 'Eucgr.D00618' => 'egr', 'Eucgr.E02395' => 'egr', 'Eucgr.F01129' => 'egr', 'Eucgr.F02622' => 'egr', 'Eucgr.F04207' => 'egr', 'FAN01G0570' => 'fan', 'FAN03G3351' => 'fan', 'FAN06G3702' => 'fan', 'FAN07G2149' => 'fan', 'FAN10G3758' => 'fan', 'FAN11G1170' => 'fan', 'FAN11G2050' => 'fan', 'FAN11G2724' => 'fan', 'FAN12G1700' => 'fan', 'FAN12G2028' => 'fan', 'FAN15G1160' => 'fan', 'FAN15G3063' => 'fan', 'FAN16G2540' => 'fan', 'FAN16G3077' => 'fan', 'FAN16G3624' => 'fan', 'FAN17G0221' => 'fan', 'FAN20G2492' => 'fan', 'FAN20G2905' => 'fan', 'FAN21G0548' => 'fan', 'FAN21G1300' => 'fan', 'FAN22G0077' => 'fan', 'FAN22G1315' => 'fan', 'FAN24G1280' => 'fan', 'FAN24G1445' => 'fan', 'FAN24G3527' => 'fan', 'FAN25G0464' => 'fan', 'FAN25G2885' => 'fan', 'FAN25G3270' => 'fan', 'FAN27G1101' => 'fan', 'FAN27G2846' => 'fan', 'FAN27G3524' => 'fan', 'FvH4_2g11770' => 'fve', 'FvH4_2g15630' => 'fve', 'FvH4_3g05570' => 'fve', 'FvH4_3g09110' => 'fve', 'FvH4_3g19940' => 'fve', 'FvH4_4g04821' => 'fve', 'FvH4_4g31480' => 'fve', 'FvH4_7g01740' => 'fve', 'Glyma.05G130400' => 'gma', 'Glyma.05G156400' => 'gma', 'Glyma.07G197000' => 'gma', 'Glyma.08G085151' => 'gma', 'Glyma.08G114500' => 'gma', 'Glyma.08G300400' => 'gma', 'Glyma.10G215800' => 'gma', 'Glyma.12G224400' => 'gma', 'Glyma.13G179300' => 'gma', 'Glyma.13G218151' => 'gma', 'Glyma.13G238800' => 'gma', 'Glyma.13G276900' => 'gma', 'Glyma.14G078200' => 'gma', 'Glyma.15G074500' => 'gma', 'Glyma.15G094100' => 'gma', 'Glyma.17G247200' => 'gma', 'Glyma.18G120100' => 'gma', 'Glyma.20G176000' => 'gma', 'Gohir.A01G063600' => 'ghi', 'Gohir.A01G170301' => 'ghi', 'Gohir.A02G060500' => 'ghi', 'Gohir.A05G133850' => 'ghi', 'Gohir.A05G161400' => 'ghi', 'Gohir.A06G012900' => 'ghi', 'Gohir.A06G035901' => 'ghi', 'Gohir.A06G127100' => 'ghi', 'Gohir.A06G210500' => 'ghi', 'Gohir.A08G008650' => 'ghi', 'Gohir.A09G072700' => 'ghi', 'Gohir.A09G088301' => 'ghi', 'Gohir.A10G040600' => 'ghi', 'Gohir.A12G036300' => 'ghi', 'Gohir.A12G143350' => 'ghi', 'Gohir.A12G165500' => 'ghi', 'Gohir.A13G145700' => 'ghi', 'Gohir.D01G050000' => 'ghi', 'Gohir.D01G051366' => 'ghi', 'Gohir.D01G161350' => 'ghi', 'Gohir.D02G065900' => 'ghi', 'Gohir.D05G164200' => 'ghi', 'Gohir.D05G355500' => 'ghi', 'Gohir.D06G010400' => 'ghi', 'Gohir.D06G111250' => 'ghi', 'Gohir.D06G132000' => 'ghi', 'Gohir.D06G210500' => 'ghi', 'Gohir.D07G165675' => 'ghi', 'Gohir.D08G062240' => 'ghi', 'Gohir.D08G086101' => 'ghi', 'Gohir.D08G138060' => 'ghi', 'Gohir.D09G072300' => 'ghi', 'Gohir.D10G041400' => 'ghi', 'Gohir.D11G191020' => 'ghi', 'Gohir.D11G212066' => 'ghi', 'Gohir.D12G036300' => 'ghi', 'Gohir.D12G168600' => 'ghi', 'Gohir.D13G150600' => 'ghi', 'Gorai.001G057300' => 'gra', 'Gorai.002G069900' => 'gra', 'Gorai.002G200000' => 'gra', 'Gorai.003G067600' => 'gra', 'Gorai.005G074800' => 'gra', 'Gorai.006G087300' => 'gra', 'Gorai.008G037500' => 'gra', 'Gorai.008G181400' => 'gra', 'Gorai.009G169400' => 'gra', 'Gorai.009G387900' => 'gra', 'Gorai.010G013300' => 'gra', 'Gorai.010G153800' => 'gra', 'Gorai.010G255800' => 'gra', 'Gorai.011G043700' => 'gra', 'Gorai.011G198900' => 'gra', 'Gorai.013G168400' => 'gra', 'GSVIVG01005212001' => 'vvi', 'GSVIVG01006163001' => 'vvi', 'GSVIVG01009625001' => 'vvi', 'GSVIVG01014338001' => 'vvi', 'GSVIVG01020005001' => 'vvi', 'GSVIVG01021450001' => 'vvi', 'GSVIVG01023975001' => 'vvi', 'GSVIVG01034490001' => 'vvi', 'HanXRQChr04g0112071' => 'han', 'HanXRQChr05g0131151' => 'han', 'HanXRQChr09g0262371' => 'han', 'HanXRQChr09g0268401' => 'han', 'HanXRQChr10g0279241' => 'han', 'HanXRQChr10g0297961' => 'han', 'HanXRQChr11g0326231' => 'han', 'HanXRQChr11g0328471' => 'han', 'HanXRQChr16g0507941' => 'han', 'HanXRQChr17g0560211' => 'han', 'Haze_02108' => 'cav', 'Haze_02428' => 'cav', 'Haze_05593' => 'cav', 'Haze_06448' => 'cav', 'Haze_09427' => 'cav', 'Haze_12022' => 'cav', 'Haze_17612' => 'cav', 'Haze_17928' => 'cav', 'Hma1.2p1_0032F.1_g019250' => 'hma', 'Hma1.2p1_0163F.1_g072690' => 'hma', 'Hma1.2p1_0265F.1_g106710' => 'hma', 'Hma1.2p1_0286F.1_g113970' => 'hma', 'Hma1.2p1_0363F.1_g136640' => 'hma', 'Hma1.2p1_0584F.1_g183470' => 'hma', 'Hma1.2p1_0885F.1_g232570' => 'hma', 'HPP92_006022' => 'vpl', 'HPP92_007320' => 'vpl', 'HPP92_011521' => 'vpl', 'HPP92_019387' => 'vpl', 'HPP92_024038' => 'vpl', 'Hund05891' => 'sun', 'Hund06450' => 'sun', 'Hund12053' => 'sun', 'Hund16800' => 'sun', 'Hund21222' => 'sun', 'Hund22896' => 'sun', 'Hund23746' => 'sun', 'Hund27083' => 'sun', 'Lalb_Chr02g0141831' => 'lal', 'Lalb_Chr02g0141841' => 'lal', 'Lalb_Chr05g0220411' => 'lal', 'Lalb_Chr06g0162081' => 'lal', 'Lalb_Chr09g0327651' => 'lal', 'Lalb_Chr13g0295051' => 'lal', 'Lalb_Chr15g0086801' => 'lal', 'Lalb_Chr16g0383781' => 'lal', 'Lalb_Chr16g0383791' => 'lal', 'Lalb_Chr18g0055441' => 'lal', 'Lalb_Chr18g0059611' => 'lal', 'Lalb_Chr20g0109661' => 'lal', 'Lalb_Chr20g0109831' => 'lal', 'Lalb_Chr20g0121871' => 'lal', 'Lalb_Chr22g0355361' => 'lal', 'Lalb_Chr25g0286371' => 'lal', 'Lj1A1187G43' => 'lonja', 'Lj1A1205T50' => 'lonja', 'Lj1A800G33' => 'lonja', 'Lj1C1187T7' => 'lonja', 'Lj1C843T11' => 'lonja', 'Lj1g0010940' => 'lja', 'Lj2A288T69' => 'lonja', 'Lj3g0024276' => 'lja', 'Lj4A47T76' => 'lonja', 'Lj4g0005805' => 'lja', 'Lj4g0006097' => 'lja', 'Lj4g0008528' => 'lja', 'Lj4g0024907' => 'lja', 'Lj5g0012472' => 'lja', 'Lj5g0018648' => 'lja', 'Lj6C789G1' => 'lonja', 'Lj6g0004000' => 'lja', 'Lj7A292G67' => 'lonja', 'Lj7A292T64' => 'lonja', 'Lj9A400T58' => 'lonja', 'Lsat_1_v5_gn_1_126181' => 'lsa', 'Lsat_1_v5_gn_4_123041' => 'lsa', 'Lsat_1_v5_gn_4_133620' => 'lsa', 'Lsat_1_v5_gn_4_53221' => 'lsa', 'Lsat_1_v5_gn_4_71961' => 'lsa', 'Lsat_1_v5_gn_7_105241' => 'lsa', 'Lsat_1_v5_gn_7_21361' => 'lsa', 'Lsat_1_v5_gn_7_28860' => 'lsa', 'Lsat_1_v5_gn_7_31260' => 'lsa', 'Lsat_1_v5_gn_8_52801' => 'lsa', 'Manes.02G191400' => 'mes', 'Manes.03G110100' => 'mes', 'Manes.04G071100' => 'mes', 'Manes.05G100500' => 'mes', 'Manes.05G164700' => 'mes', 'Manes.15G087000' => 'mes', 'Manes.15G121500' => 'mes', 'Manes.16G028300' => 'mes', 'Manes.17G046100' => 'mes', 'Manes.17G069800' => 'mes', 'Manes.18G100500' => 'mes', 'Mapoly0002s0109' => 'mpo', 'Mapoly0024s0007' => 'mpo', 'Mapoly0089s0032' => 'mpo', 'MBI04_g42241_MAGBIO' => 'mbi', 'MBI05_g11988_MAGBIO' => 'mbi', 'MBI05_g35452_MAGBIO' => 'mbi', 'MBI07_g30179_MAGBIO' => 'mbi', 'MBI07_g35859_MAGBIO' => 'mbi', 'MBI07_g35860_MAGBIO' => 'mbi', 'MBI07_g37166_MAGBIO' => 'mbi', 'MBI08_g18172_MAGBIO' => 'mbi', 'MBI09_g08441_MAGBIO' => 'mbi', 'MBI13_g01676_MAGBIO' => 'mbi', 'MBI14_g42955_MAGBIO' => 'mbi', 'MBI16_g13161_MAGBIO' => 'mbi', 'MBI17_g27204_MAGBIO' => 'mbi', 'MBI19_g21595_MAGBIO' => 'mbi', 'MD00G1148400' => 'mdo', 'MD02G1301200' => 'mdo', 'MD03G1227800' => 'mdo', 'MD05G1041100' => 'mdo', 'MD05G1124800' => 'mdo', 'MD05G1284000' => 'mdo', 'MD05G1338800' => 'mdo', 'MD05G1338900' => 'mdo', 'MD07G1022800' => 'mdo', 'MD10G1047500' => 'mdo', 'MD10G1127500' => 'mdo', 'MD10G1262300' => 'mdo', 'MD10G1293800' => 'mdo', 'MD16G1074300' => 'mdo', 'Medtr1g021670' => 'mtr', 'Medtr1g096320' => 'mtr', 'Medtr2g013690' => 'mtr', 'Medtr2g019450' => 'mtr', 'Medtr2g085170' => 'mtr', 'Medtr4g088785' => 'mtr', 'Medtr8g055930' => 'mtr', 'Medtr8g085850' => 'mtr', 'MELO3C002605.2' => 'cme', 'MELO3C003891.2' => 'cme', 'MELO3C004012.2' => 'cme', 'MELO3C007134.2' => 'cme', 'MELO3C008118.2' => 'cme', 'MELO3C016700.2' => 'cme', 'MELO3C024127.2' => 'cme', 'MELO3C033361.2' => 'cme', 'MELO3C033362.2' => 'cme', 'Migut.C00430' => 'egut', 'Migut.C01246' => 'egut', 'Migut.E00101' => 'egut', 'Migut.H01486' => 'egut', 'Migut.H01939' => 'egut', 'Migut.K00360' => 'egut', 'Migut.M00910' => 'egut', 'Migut.M01139' => 'egut', 'Migut.N02677' => 'egut', 'MSTRG.13252' => 'ama', 'MSTRG.14701' => 'ama', 'MSTRG.1521' => 'ama', 'MSTRG.15884' => 'ama', 'MSTRG.16242' => 'ama', 'MSTRG.22285' => 'ama', 'MSTRG.22444' => 'ama', 'MSTRG.2349' => 'ama', 'MSTRG.26308' => 'ama', 'MSTRG.28296' => 'ama', 'MSTRG.9895' => 'ama', 'Nitab4.5_0000110g0060' => 'nta', 'Nitab4.5_0000420g0130' => 'nta', 'Nitab4.5_0000422g0030' => 'nta', 'Nitab4.5_0000560g0180' => 'nta', 'Nitab4.5_0000703g0100' => 'nta', 'Nitab4.5_0000786g0200' => 'nta', 'Nitab4.5_0001336g0020' => 'nta', 'Nitab4.5_0001796g0030' => 'nta', 'Nitab4.5_0003348g0060' => 'nta', 'Nitab4.5_0003698g0040' => 'nta', 'Nitab4.5_0003942g0090' => 'nta', 'Nitab4.5_0004775g0070' => 'nta', 'Nitab4.5_0004864g0030' => 'nta', 'Nitab4.5_0005615g0020' => 'nta', 'Nitab4.5_0009288g0030' => 'nta', 'Nitab4.5_0009341g0010' => 'nta', 'Nitab4.5_0009535g0010' => 'nta', 'Nn1g03995' => 'nnu', 'Nn1g04100' => 'nnu', 'Nn1g06530' => 'nnu', 'Nn3g16404' => 'nnu', 'Nn3g17212' => 'nnu', 'Nn3g20776' => 'nnu', 'Nn3g21923' => 'nnu', 'Nn5g27737' => 'nnu', 'Nn5g29461' => 'nnu', 'Nn7g38355' => 'nnu', 'Nn8g39873' => 'nnu', 'Oeu000548.2' => 'oeu', 'Oeu004672.1' => 'oeu', 'Oeu015605.2' => 'oeu', 'Oeu016092.1' => 'oeu', 'Oeu017879.3' => 'oeu', 'Oeu024910.1' => 'oeu', 'Oeu028965.1' => 'oeu', 'Oeu031269.1' => 'oeu', 'Oeu031270.1' => 'oeu', 'Oeu032535.1' => 'oeu', 'Oeu034151.1' => 'oeu', 'Oeu034152.1' => 'oeu', 'Oeu034588.2' => 'oeu', 'Oeu050846.1' => 'oeu', 'Oeu050849.2' => 'oeu', 'Oeu051063.2' => 'oeu', 'Oeu052368.1' => 'oeu', 'Oeu052370.1' => 'oeu', 'Os01g0210400' => 'osa', 'Os01g0304300' => 'osa', 'Os01g0749100' => 'osa', 'Os02g0745800' => 'osa', 'Os03g0769050' => 'osa', 'Os05g0531500' => 'osa', 'Os06g0724300' => 'osa', 'Os11g0198100' => 'osa', 'Peaxi162Scf00069g01425' => 'pax', 'Peaxi162Scf00280g00811' => 'pax', 'Peaxi162Scf00310g00615' => 'pax', 'Peaxi162Scf00362g00542' => 'pax', 'Peaxi162Scf00461g00310' => 'pax', 'Peaxi162Scf00530g00118' => 'pax', 'Peaxi162Scf00541g00057' => 'pax', 'Peaxi162Scf00661g00017' => 'pax', 'Peaxi162Scf00926g00027' => 'pax', 'Peaxi162Scf01064g00263' => 'pax', 'Peaxi162Scf01211g00135' => 'pax', 'PGR004G2336' => 'pgr', 'PGR042G0327' => 'pgr', 'PGR042G1957' => 'pgr', 'PGR042G2003' => 'pgr', 'PGR042G3929' => 'pgr', 'PGR083G1137' => 'pgr', 'PGR083G1364' => 'pgr', 'PGSC0003DMG400003381' => 'stu', 'PGSC0003DMG400003417' => 'stu', 'PGSC0003DMG400008981' => 'stu', 'PGSC0003DMG400012417' => 'stu', 'PGSC0003DMG400012823' => 'stu', 'PGSC0003DMG400016885' => 'stu', 'PGSC0003DMG400022812' => 'stu', 'PGSC0003DMG400029726' => 'stu', 'PGSC0003DMG401009243' => 'stu', 'PGSC0003DMG401031505' => 'stu', 'PGSC0003DMG402031505' => 'stu', 'Phvul.001G017600' => 'pvu', 'Phvul.002G193500' => 'pvu', 'Phvul.002G228900' => 'pvu', 'Phvul.002G236800' => 'pvu', 'Phvul.003G049500' => 'pvu', 'Phvul.005G072000' => 'pvu', 'Phvul.006G164800' => 'pvu', 'Phvul.006G185100' => 'pvu', 'Phvul.007G090000' => 'pvu', 'Potri.001G399800' => 'ptr', 'Potri.002G149900' => 'ptr', 'Potri.004G044100' => 'ptr', 'Potri.004G177600' => 'ptr', 'Potri.009G138000' => 'ptr', 'Potri.010G094000' => 'ptr', 'Potri.011G053000' => 'ptr', 'Potri.011G119300' => 'ptr', 'Potri.013G113700' => 'ptr', 'Potri.018G107800' => 'ptr', 'Potri.019G084100' => 'ptr', 'Pp3c14_23720' => 'ppa', 'Pp3c16_6340' => 'ppa', 'Pp3c23_13420' => 'ppa', 'Pp3c24_2740' => 'ppa', 'Pp3c25_860' => 'ppa', 'Pp3c8_21750' => 'ppa', 'Prupe.1G273000' => 'ppe', 'Prupe.1G273700' => 'ppe', 'Prupe.1G274100' => 'ppe', 'Prupe.2G023300' => 'ppe', 'Prupe.4G048000' => 'ppe', 'Prupe.4G080400' => 'ppe', 'Prupe.4G181200' => 'ppe', 'Prupe.8G056900' => 'ppe', 'Prupe.8G168700' => 'ppe', 'Psat1g189080' => 'psa', 'Psat1g204760' => 'psa', 'Psat4g175560' => 'psa', 'Psat4g177720' => 'psa', 'Psat5g244240' => 'psa', 'Psat6g010720' => 'psa', 'Psat6g187200' => 'psa', 'Psat7g072040' => 'psa', 'PSO017G3501' => 'pso', 'PSO063G2148' => 'pso', 'PSO063G5608' => 'pso', 'PSO210G6392' => 'pso', 'PSO541G2319' => 'pso', 'PSO541G2836' => 'pso', 'PSO541G4012' => 'pso', 'PSO541G6253' => 'pso', 'PSO675G0580' => 'pso', 'PSO675G0856' => 'pso', 'PSO675G5635' => 'pso', 'PSO675G9157' => 'pso', 'PSO832G1660' => 'pso', 'PSO832G1969' => 'pso', 'QL02p007186' => 'qlo', 'QL02p033904' => 'qlo', 'QL03p064391' => 'qlo', 'QL05p040593' => 'qlo', 'QL05p058242' => 'qlo', 'QL08p021825' => 'qlo', 'QL11p004981' => 'qlo', 'RcHm_v2.0_Chr1g0318301' => 'rch', 'RcHm_v2.0_Chr4g0418501' => 'rch', 'RcHm_v2.0_Chr4g0439971' => 'rch', 'RcHm_v2.0_Chr5g0008541' => 'rch', 'RcHm_v2.0_Chr5g0014101' => 'rch', 'RcHm_v2.0_Chr5g0014131' => 'rch', 'RcHm_v2.0_Chr5g0033621' => 'rch', 'RcHm_v2.0_Chr6g0272041' => 'rch', 'RcHm_v2.0_Chr6g0278831' => 'rch', 'Rhsim02G0130400' => 'rsi', 'Rhsim02G0171100' => 'rsi', 'Rhsim05G0053000' => 'rsi', 'Rhsim05G0053100' => 'rsi', 'Rhsim06G0096500' => 'rsi', 'Rhsim06G0096600' => 'rsi', 'Rhsim06G0199100' => 'rsi', 'Rhsim12G0062300' => 'rsi', 'Rhsim12G0062800' => 'rsi', 'Sabra02G0118600' => 'sbr', 'Sabra04G0027300' => 'sbr', 'Sabra04G0119500' => 'sbr', 'Sabra08G0112500' => 'sbr', 'Sabra11G0036800' => 'sbr', 'Sabra11G0103800' => 'sbr', 'Sabra13G0096300' => 'sbr', 'Sabra16G0262300' => 'sbr', 'Sabra18G0091700' => 'sbr', 'Sabra19G0095400' => 'sbr', 'SalBow6G3080' => 'sbo', 'SalBow7G1157' => 'sbo', 'SalBow7G2123' => 'sbo', 'SalBow7G2285' => 'sbo', 'SalBow7G3537' => 'sbo', 'SalBow8G2947' => 'sbo', 'SalBow8G4463' => 'sbo', 'SalBow8G5466' => 'sbo', 'Sc01g0001750' => 'sci', 'Sc02g0006640' => 'sci', 'Sc02g0006670' => 'sci', 'Sc04g0008220' => 'sci', 'Sc05g0006190' => 'sci', 'Sc08g0002760' => 'sci', 'Sc17g0006170' => 'sci', 'Sc22g0002050' => 'sci', 'Sc23g0001190' => 'sci', 'Sc24g0000980' => 'sci', 'Sed0006245' => 'sed', 'Sed0007543' => 'sed', 'Sed0009411' => 'sed', 'Sed0010765' => 'sed', 'Sed0012944' => 'sed', 'Sed0014682' => 'sed', 'Sed0016174' => 'sed', 'Sed0016796' => 'sed', 'Sed0020317' => 'sed', 'Sed0021467' => 'sed', 'SEGI_01316' => 'sgi', 'SEGI_03374' => 'sgi', 'SEGI_16265' => 'sgi', 'SEGI_18569' => 'sgi', 'SEGI_20351' => 'sgi', 'SEGI_26395' => 'sgi', 'SEGI_29469' => 'sgi', 'SEGI_34771' => 'sgi', 'SEGI_36769' => 'sgi', 'SEGI_37139' => 'sgi', 'SGA_v2.0_scaffold100G29687' => 'sas', 'SGA_v2.0_scaffold118G32472' => 'sas', 'SGA_v2.0_scaffold14G07051' => 'sas', 'SGA_v2.0_scaffold183G39845' => 'sas', 'SGA_v2.0_scaffold1G00174' => 'sas', 'SGA_v2.0_scaffold22G09714' => 'sas', 'SGA_v2.0_scaffold333G48992' => 'sas', 'SGA_v2.0_scaffold46G17491' => 'sas', 'SGA_v2.0_scaffold49G18294' => 'sas', 'SGA_v2.0_scaffold63G21658' => 'sas', 'SHI01741' => 'shi', 'SHI05771' => 'shi', 'SHI18077' => 'shi', 'SHI20525' => 'shi', 'SHI20527' => 'shi', 'SHI20528' => 'shi', 'SMO172G0185' => 'smo', 'SMO198G0020' => 'smo', 'SMO351G0006' => 'smo', 'SMO356G0118' => 'smo', 'SMO358G0296' => 'smo', 'SMO367G0079' => 'smo', 'SMO367G1277' => 'smo', 'Solyc01g014220.3' => 'sly', 'Solyc01g111770.2' => 'sly', 'Solyc02g078180.3' => 'sly', 'Solyc03g006430.3' => 'sly', 'Solyc03g006456.1' => 'sly', 'Solyc03g079860.2' => 'sly', 'Solyc04g079770.3' => 'sly', 'Solyc05g007430.4' => 'sly', 'Solyc07g063150.3' => 'sly', 'Solyc08g016620.3' => 'sly', 'Solyc09g057590.3' => 'sly', 'Solyc09g057600.1' => 'sly', 'Solyc10g009050.3' => 'sly', 'Solyc11g017420.2' => 'sly', 'Sopen01g053810' => 'spe', 'Sopen02g023040' => 'spe', 'Sopen03g002440' => 'spe', 'Sopen04g033350' => 'spe', 'Sopen05g003310' => 'spe', 'Sopen07g004050' => 'spe', 'Sopen07g031340' => 'spe', 'Sopen08g006990' => 'spe', 'Sopen10g004830' => 'spe', 'Sopen11g009370' => 'spe', 'Sp1g24450' => 'spa', 'Sp1g29670' => 'spa', 'Sp1g39600' => 'spa', 'Sp2g11080' => 'spa', 'Sp2g13970' => 'spa', 'Sp4g16130' => 'spa', 'Sp6g13080' => 'spa', 'Sp7g37270' => 'spa', 'TAR371G0065' => 'tar', 'TAR376G0340' => 'tar', 'TAR376G0435' => 'tar', 'TAR381G0002' => 'tar', 'TAR381G1236' => 'tar', 'TAR624G0055' => 'tar', 'TAR624G0324' => 'tar', 'TAR624G0696' => 'tar', 'TAR624G0906' => 'tar', 'TAR625G0107' => 'tar', 'TAR626G0015' => 'tar', 'TAR626G1356' => 'tar', 'TAR627G0888' => 'tar', 'TAR628G0399' => 'tar', 'TAR628G1327' => 'tar', 'TAR629G2831' => 'tar', 'TAR629G2874' => 'tar', 'TAR633G1432' => 'tar', 'TAR633G2771' => 'tar', 'THA.LOC104803394' => 'tha', 'THA.LOC104805153' => 'tha', 'THA.LOC104806784' => 'tha', 'THA.LOC104810473' => 'tha', 'THA.LOC104813100' => 'tha', 'THA.LOC104814215' => 'tha', 'THA.LOC104815554' => 'tha', 'THA.LOC104820544' => 'tha', 'THA.LOC104824754' => 'tha', 'THA.LOC104827717' => 'tha', 'Thecc.02G031400' => 'tca', 'Thecc.02G055900' => 'tca', 'Thecc.02G350800' => 'tca', 'Thecc.06G150900' => 'tca', 'Thecc.06G186600' => 'tca', 'Thecc.07G089600' => 'tca', 'Thecc.08G020400' => 'tca', 'Thecc.08G182100' => 'tca', 'Thhalv10000873m.g' => 'esa', 'Thhalv10004185m.g' => 'esa', 'Thhalv10006981m.g' => 'esa', 'Thhalv10007204m.g' => 'esa', 'Thhalv10011374m.g' => 'esa', 'Thhalv10013482m.g' => 'esa', 'Thhalv10017801m.g' => 'esa', 'Thhalv10024983m.g' => 'esa', 'TPR.G12072' => 'tpr', 'TPR.G15769' => 'tpr', 'TPR.G16504' => 'tpr', 'TPR.G16506' => 'tpr', 'TPR.G24345' => 'tpr', 'TPR.G26666' => 'tpr', 'TPR.G27320' => 'tpr', 'TPR.G31819' => 'tpr', 'TPR.G38879' => 'tpr', 'TPR.G39015' => 'tpr', 'TPR.G8819' => 'tpr', 'TWI09G0924' => 'twi', 'TWI12G0811' => 'twi', 'TWI12G1294' => 'twi', 'TWI31G0150' => 'twi', 'TWI36G1262' => 'twi', 'TWI38G1287' => 'twi', 'TWI38G1633' => 'twi', 'TWI38G1982' => 'twi', 'TWI39G0116' => 'twi', 'TWI60G1011' => 'twi', 'TWI63G0171' => 'twi', 'TWI73G0839' => 'twi', 'TWI79G1511' => 'twi', 'unitig_0.g915' => 'ugi', 'unitig_0.g916' => 'ugi', 'unitig_21.g20219' => 'ugi', 'unitig_21.g20416' => 'ugi', 'unitig_578.g16132' => 'ugi', 'unitig_578.g16718' => 'ugi', 'unitig_62.g23481' => 'ugi', 'unitig_744.g24535' => 'ugi', 'unitig_749.g13525' => 'ugi', 'vmacro01248' => 'vma', 'vmacro02290' => 'vma', 'vmacro10946' => 'vma', 'vmacro11865' => 'vma', 'vmacro12493' => 'vma', 'vmacro17322' => 'vma', 'vmacro21599' => 'vma', 'vmacro23041' => 'vma', 'VMungo0251G0004' => 'vmu', 'VMungo0251G2639' => 'vmu', 'VMungo0251G2967' => 'vmu', 'VMungo0540G0864' => 'vmu', 'VMungo0540G1569' => 'vmu', 'VMungo0647G0317' => 'vmu', 'VMungo0720G1373' => 'vmu', 'VMungo0720G1508' => 'vmu', 'VMungo1080G0485' => 'vmu', 'VMungo1215G3177' => 'vmu', 'Zm00001eb112600' => 'zma', 'Zm00001eb120220' => 'zma', 'Zm00001eb153240' => 'zma', 'Zm00001eb168880' => 'zma', 'Zm00001eb213920' => 'zma', 'Zm00001eb228280' => 'zma', 'Zm00001eb254580' => 'zma', 'Zm00001eb272180' => 'zma', 'Zm00001eb293190' => 'zma', 'Zm00001eb322930' => 'zma', 'Zm00001eb353360' => 'zma', 'Zm00001eb353390' => 'zma', 'Zm00001eb353430' => 'zma', 'Zm00001eb353440' => 'zma', 'Zm00001eb353780' => 'zma' ) $gf_id = 'HOM05D000499' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000499' ) $data_identifier = 'HOM05D000499' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 29, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 12, 'amhyb' => (int) 8, 'aly' => (int) 12, 'aox' => (int) 9, 'arhy' => (int) 26, 'ath' => (int) 8, 'atr' => (int) 7, 'acertr' => (int) 10, 'cqu' => (int) 15, 'bca' => (int) 29, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 11, 'cansat' => (int) 8, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 9, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 8, 'cpa' => (int) 10, 'csa' => (int) 7, 'camsi' => (int) 20, 'dca' => (int) 8, 'din' => (int) 12, 'dzi' => (int) 14, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 6, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 38, 'gra' => (int) 16, 'vvi' => (int) 8, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 5, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 11, 'lja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 11, 'mpo' => (int) 3, 'mbi' => (int) 14, 'mdo' => (int) 14, 'mtr' => (int) 8, 'cme' => (int) 9, 'egut' => (int) 9, 'ama' => (int) 11, 'nta' => (int) 17, 'nnu' => (int) 11, 'oeu' => (int) 18, 'osa' => (int) 8, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 6, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 9, 'rsi' => (int) 9, 'sbr' => (int) 10, 'sbo' => (int) 8, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 10, 'sas' => (int) 10, 'shi' => (int) 6, 'smo' => (int) 7, 'sly' => (int) 14, 'spe' => (int) 10, 'spa' => (int) 8, 'tar' => (int) 19, 'tha' => (int) 10, 'tca' => (int) 8, 'esa' => (int) 8, 'tpr' => (int) 11, 'twi' => (int) 13, 'ugi' => (int) 9, 'vma' => (int) 8, 'vmu' => (int) 10, 'zma' => (int) 15 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb353780' $species_info = array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ) $local_species = 'sas' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000499', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1066', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p29780' => 'bna', 'A02p33180' => 'bna', 'A03p16470' => 'bna', 'A03p66010' => 'bna', 'A04p25970' => 'bna', 'A06p01270' => 'bna', 'A06p46080' => 'bna', 'A07p11400' => 'bna', 'A08p01840' => 'bna', 'A08p08230' => 'bna', 'A08p25740' => 'bna', 'A09p32070' => 'bna', 'A09p37830' => 'bna', 'A09p42840' => 'bna', 'A09p42850' => 'bna', 'Aa31LG10G2060' => 'aar', 'Aa31LG2G7410' => 'aar', 'Aa31LG6G10200' => 'aar', 'Aa31LG6G16680' => 'aar', 'Aa31LG6G8470' => 'aar', 'Aa31LG9G12730' => 'aar', 'Aa31LG9G13680' => 'aar', 'Aa31LG9G14920' => 'aar', 'Aa31LG9G6650' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4977' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5467' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3254' => 'aag', 'Actinidia02578' => 'ach', 'Actinidia07693' => 'ach', 'Actinidia08413' => 'ach', 'Actinidia08414' => 'ach', 'Actinidia15289' => 'ach', 'Actinidia19871' => 'ach', 'Actinidia21475' => 'ach', 'Actinidia22576' => 'ach', 'Actinidia28327' => 'ach', 'Actinidia32491' => 'ach', 'Actinidia39463' => 'ach', 'Actinidia39571' => 'ach', 'Ah.01g013750' => 'amhyb', 'Ah.01g023210' => 'amhyb', 'Ah.04g164850' => 'amhyb', 'Ah.05g178060' => 'amhyb', 'Ah.07g204270' => 'amhyb', 'Ah.07g208480' => 'amhyb', 'Ah.09g237410' => 'amhyb', 'Ah.14g089460' => 'amhyb', 'AL1G41790' => 'aly', 'AL1G49050' => 'aly', 'AL1G53810' => 'aly', 'AL1G61400' => 'aly', 'AL4G18580' => 'aly', 'AL5G12510' => 'aly', 'AL5G12540' => 'aly', 'AL6G43230' => 'aly', 'AL7G10370' => 'aly', 'AL7G19250' => 'aly', 'AL8G12240' => 'aly', 'AL8G18540' => 'aly', 'Aqoxy1G02409' => 'aox', 'Aqoxy2G03993' => 'aox', 'Aqoxy3G03357' => 'aox', 'Aqoxy4G00785' => 'aox', 'Aqoxy5G02598' => 'aox', 'Aqoxy6G00132' => 'aox', 'Aqoxy7G01776' => 'aox', 'Aqoxy7G02316' => 'aox', 'Aqoxy7G03973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.12AFKW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B8730' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27IQR1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3F75VG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3RE0GA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41TCQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.527VTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FIR39' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5W8UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DA38EV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ63HS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H1I32C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HC27T5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4M8AP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7N3CZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9UVDZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LS1NQA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT1D4B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SKC4TM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCFV76' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF9Q1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQWD9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1ZM88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WE07RT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YCK7VH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJE6Q6' => 'arhy', 'AT1G28240' => 'ath', 'AT1G34550' => 'ath', 'AT1G53040' => 'ath', 'AT2G02910' => 'ath', 'AT4G09630' => 'ath', 'AT4G38500' => 'ath', 'AT5G42660' => 'ath', 'AT5G46220' => 'ath', 'ATR0152G026' => 'atr', 'ATR0564G343' => 'atr', 'ATR0706G151' => 'atr', 'ATR0733G207' => 'atr', 'ATR0751G234' => 'atr', 'ATR0807G048' => 'atr', 'ATR1091G084' => 'atr', 'Atru.chr10.1229' => 'acertr', 'Atru.chr10.1230' => 'acertr', 'Atru.chr10.1874' => 'acertr', 'Atru.chr11.1808' => 'acertr', 'Atru.chr13.1795' => 'acertr', 'Atru.chr13.570' => 'acertr', 'Atru.chr2.2608' => 'acertr', 'Atru.chr2.2609' => 'acertr', 'Atru.chr5.3428' => 'acertr', 'Atru.chr8.1171' => 'acertr', 'AUR62004651' => 'cqu', 'AUR62008675' => 'cqu', 'AUR62010014' => 'cqu', 'AUR62013004' => 'cqu', 'AUR62014825' => 'cqu', 'AUR62015015' => 'cqu', 'AUR62015151' => 'cqu', 'AUR62017020' => 'cqu', 'AUR62019422' => 'cqu', 'AUR62023570' => 'cqu', 'AUR62025571' => 'cqu', 'AUR62029098' => 'cqu', 'AUR62033863' => 'cqu', 'AUR62034296' => 'cqu', 'AUR62040075' => 'cqu', 'BcaB02g07334' => 'bca', 'BcaB02g10575' => 'bca', 'BcaB03g12119' => 'bca', 'BcaB03g12120' => 'bca', 'BcaB03g13945' => 'bca', 'BcaB04g17123' => 'bca', 'BcaB04g17867' => 'bca', 'BcaB04g19839' => 'bca', 'BcaB07g30317' => 'bca', 'BcaB07g32432' => 'bca', 'BcaB07g33362' => 'bca', 'BcaB08g36611' => 'bca', 'BcaC01g00028' => 'bca', 'BcaC01g01356' => 'bca', 'BcaC01g02034' => 'bca', 'BcaC01g06051' => 'bca', 'BcaC03g16839' => 'bca', 'BcaC03g17176' => 'bca', 'BcaC05g26829' => 'bca', 'BcaC06g31490' => 'bca', 'BcaC06g35344' => 'bca', 'BcaC06g36570' => 'bca', 'BcaC07g37537' => 'bca', 'BcaC08g43491' => 'bca', 'BcaC08g43773' => 'bca', 'BcaNung00234' => 'bca', 'BcaNung01982' => 'bca', 'BcaNung03707' => 'bca', 'BcaNung06454' => 'bca', 'BolC2t10762H' => 'bol', 'BolC2t11191H' => 'bol', 'BolC3t14322H' => 'bol', 'BolC3t19747H' => 'bol', 'BolC3t21425H' => 'bol', 'BolC4t27800H' => 'bol', 'BolC5t31423H' => 'bol', 'BolC6t35951H' => 'bol', 'BolC6t36282H' => 'bol', 'BolC7t40678H' => 'bol', 'BolC7t40679H' => 'bol', 'BolC7t42222H' => 'bol', 'BolC7t43492H' => 'bol', 'BolC7t46785H' => 'bol', 'BolC8t47853H' => 'bol', 'BolC9t56805H' => 'bol', 'BraA02t08000Z' => 'bra', 'BraA02t08341Z' => 'bra', 'BraA03t10936Z' => 'bra', 'BraA03t15657Z' => 'bra', 'BraA04t18100Z' => 'bra', 'BraA05t20523Z' => 'bra', 'BraA06t23353Z' => 'bra', 'BraA06t27473Z' => 'bra', 'BraA06t27769Z' => 'bra', 'BraA07t28928Z' => 'bra', 'BraA08t32236Z' => 'bra', 'BraA08t32841Z' => 'bra', 'BraA08t34524Z' => 'bra', 'BraA09t38742Z' => 'bra', 'BraA09t39295Z' => 'bra', 'C02p47180' => 'bna', 'C02p50990' => 'bna', 'C03p19360' => 'bna', 'C03p74950' => 'bna', 'C03p91000' => 'bna', 'C04p63260' => 'bna', 'C05p27050' => 'bna', 'C06p08750' => 'bna', 'C06p11490' => 'bna', 'C07p02820' => 'bna', 'C07p17180' => 'bna', 'C07p29440' => 'bna', 'C07p63730' => 'bna', 'C09p39260' => 'bna', 'CAN.G1164.34' => 'can', 'CAN.G1164.39' => 'can', 'CAN.G1530.3' => 'can', 'CAN.G162.61' => 'can', 'CAN.G176.6' => 'can', 'CAN.G289.49' => 'can', 'CAN.G370.21' => 'can', 'CAN.G370.22' => 'can', 'CAN.G371.117' => 'can', 'CAN.G58.37' => 'can', 'CAN.G588.98' => 'can', 'CANSAT21G2266' => 'cansat', 'CANSAT25G2799' => 'cansat', 'CANSAT35G0862' => 'cansat', 'CANSAT35G1704' => 'cansat', 'CANSAT35G1760' => 'cansat', 'CANSAT56G3971' => 'cansat', 'CANSAT56G4116' => 'cansat', 'CANSAT80G1259' => 'cansat', 'CARHR027730' => 'chi', 'CARHR033880' => 'chi', 'CARHR043270' => 'chi', 'CARHR145330' => 'chi', 'CARHR145340' => 'chi', 'CARHR175570' => 'chi', 'CARHR181570' => 'chi', 'CARHR258470' => 'chi', 'CARHR260490' => 'chi', 'CARHR294220' => 'chi', 'Carub.0001s2668' => 'cru', 'Carub.0001s3257' => 'cru', 'Carub.0001s4220' => 'cru', 'Carub.0005s0179' => 'cru', 'Carub.0006s2807' => 'cru', 'Carub.0007s0039' => 'cru', 'Carub.0008s0169' => 'cru', 'Carub.0008s0636' => 'cru', 'Ca_00338_v3' => 'car', 'Ca_00542_v3' => 'car', 'Ca_01844_v3' => 'car', 'Ca_10611_v3' => 'car', 'Ca_13326_v3' => 'car', 'Ca_17944_v3' => 'car', 'Ca_18546_v3' => 'car', 'Ca_24219_v3' => 'car', 'Ca_29972_v3' => 'car', 'CBR_g3681' => 'cbr', 'CBR_g40021' => 'cbr', 'Cc01_g08140' => 'ccan', 'Cc02_g13410' => 'ccan', 'Cc02_g37480' => 'ccan', 'Cc05_g12030' => 'ccan', 'Cc09_g03370' => 'ccan', 'Cc09_g10300' => 'ccan', 'Cc10_g03530' => 'ccan', 'Cc10_g11380' => 'ccan', 'CDE01G0176' => 'cde', 'CDE02G0675' => 'cde', 'CDE02G0942' => 'cde', 'CDE02G1153' => 'cde', 'CDE02G4177' => 'cde', 'CDE04G2117' => 'cde', 'CDE04G2736' => 'cde', 'CDE08G1161' => 'cde', 'CDE09G1238' => 'cde', 'Cfa000467' => 'cfa', 'Cfa000947' => 'cfa', 'Cfa004969' => 'cfa', 'Cfa005284' => 'cfa', 'Cfa008993' => 'cfa', 'Cfa018187' => 'cfa', 'Cfa018454' => 'cfa', 'Cfa020585' => 'cfa', 'Ciclev10000424m.g' => 'ccl', 'Ciclev10003605m.g' => 'ccl', 'Ciclev10007828m.g' => 'ccl', 'Ciclev10014620m.g' => 'ccl', 'Ciclev10015169m.g' => 'ccl', 'Ciclev10018291m.g' => 'ccl', 'Ciclev10028256m.g' => 'ccl', 'Ciclev10033822m.g' => 'ccl', 'CiPaw.05G060300' => 'cil', 'CiPaw.05G085000' => 'cil', 'CiPaw.06G083700' => 'cil', 'CiPaw.06G120300' => 'cil', 'CiPaw.09G060500' => 'cil', 'CiPaw.09G123800' => 'cil', 'CiPaw.11G169700' => 'cil', 'CiPaw.12G118300' => 'cil', 'CiPaw.15G071000' => 'cil', 'CiPaw.15G081900' => 'cil', 'ClCG01G024610' => 'cla', 'ClCG03G006070' => 'cla', 'ClCG05G019250' => 'cla', 'ClCG09G009500' => 'cla', 'ClCG11G008200' => 'cla', 'ClCG11G018080' => 'cla', 'COL.COLO4_17373' => 'col', 'COL.COLO4_22994' => 'col', 'COL.COLO4_26389' => 'col', 'COL.COLO4_27170' => 'col', 'COL.COLO4_31074' => 'col', 'COL.COLO4_31465' => 'col', 'COL.COLO4_36438' => 'col', 'COL.COLO4_36439' => 'col', 'Cpa.g.c38781' => 'cpa', 'Cpa.g.sc128.12' => 'cpa', 'Cpa.g.sc166.7' => 'cpa', 'Cpa.g.sc166.8' => 'cpa', 'Cpa.g.sc20.111' => 'cpa', 'Cpa.g.sc27.31' => 'cpa', 'Cpa.g.sc64.36' => 'cpa', 'Cpa.g.sc64.37' => 'cpa', 'Cpa.g.sc66.49' => 'cpa', 'Cpa.g.sc80.64' => 'cpa', 'CsaV3_1G012320' => 'csa', 'CsaV3_2G008480' => 'csa', 'CsaV3_2G033450' => 'csa', 'CsaV3_3G044830' => 'csa', 'CsaV3_4G033710' => 'csa', 'CsaV3_6G051730' => 'csa', 'CsaV3_7G025350' => 'csa', 'CSS0001067' => 'camsi', 'CSS0005996' => 'camsi', 'CSS0006590' => 'camsi', 'CSS0009673' => 'camsi', 'CSS0010201' => 'camsi', 'CSS0010549' => 'camsi', 'CSS0011364' => 'camsi', 'CSS0014473' => 'camsi', 'CSS0014961' => 'camsi', 'CSS0020191' => 'camsi', 'CSS0021165' => 'camsi', 'CSS0022306' => 'camsi', 'CSS0030591' => 'camsi', 'CSS0030696' => 'camsi', 'CSS0032653' => 'camsi', 'CSS0037487' => 'camsi', 'CSS0041102' => 'camsi', 'CSS0041261' => 'camsi', 'CSS0046246' => 'camsi', 'CSS0049256' => 'camsi', 'DCAR_004075' => 'dca', 'DCAR_011538' => 'dca', 'DCAR_019553' => 'dca', 'DCAR_020952' => 'dca', 'DCAR_021739' => 'dca', 'DCAR_027407' => 'dca', 'DCAR_027913' => 'dca', 'DCAR_028066' => 'dca', 'Dinv05899' => 'din', 'Dinv07563' => 'din', 'Dinv08010' => 'din', 'Dinv14125' => 'din', 'Dinv20172' => 'din', 'Dinv30743' => 'din', 'Dinv31229' => 'din', 'Dinv34162' => 'din', 'Dinv36028' => 'din', 'Dinv39368' => 'din', 'Dinv40565' => 'din', 'Dinv41706' => 'din', 'Duzib052G0089' => 'dzi', 'Duzib116G0641' => 'dzi', 'Duzib132G0069' => 'dzi', 'Duzib132G1219' => 'dzi', 'Duzib147G0278' => 'dzi', 'Duzib160G0480' => 'dzi', 'Duzib170G0661' => 'dzi', 'Duzib177G0591' => 'dzi', 'Duzib187G1353' => 'dzi', 'Duzib192G0858' => 'dzi', 'Duzib192G0883' => 'dzi', 'Duzib213G0506' => 'dzi', 'Duzib235G0289' => 'dzi', 'Duzib251G0422' => 'dzi', 'ECA232G3898' => 'eca', 'ECA233G5950' => 'eca', 'ECA234G1699' => 'eca', 'ECA234G2421' => 'eca', 'ECA236G0426' => 'eca', 'ECA236G4331' => 'eca', 'ECA248G2573' => 'eca', 'EL10Ac1g00077' => 'bvu', 'EL10Ac1g01746' => 'bvu', 'EL10Ac2g03464' => 'bvu', 'EL10Ac4g08176' => 'bvu', 'EL10Ac7g17521' => 'bvu', 'EL10Ac8g20386' => 'bvu', 'EL10Ac9g21343' => 'bvu', 'EL10Ac9g22688' => 'bvu', 'Eucgr.B03434' => 'egr', 'Eucgr.D00618' => 'egr', 'Eucgr.E02395' => 'egr', 'Eucgr.F01129' => 'egr', 'Eucgr.F02622' => 'egr', 'Eucgr.F04207' => 'egr', 'FAN01G0570' => 'fan', 'FAN03G3351' => 'fan', 'FAN06G3702' => 'fan', 'FAN07G2149' => 'fan', 'FAN10G3758' => 'fan', 'FAN11G1170' => 'fan', 'FAN11G2050' => 'fan', 'FAN11G2724' => 'fan', 'FAN12G1700' => 'fan', 'FAN12G2028' => 'fan', 'FAN15G1160' => 'fan', 'FAN15G3063' => 'fan', 'FAN16G2540' => 'fan', 'FAN16G3077' => 'fan', 'FAN16G3624' => 'fan', 'FAN17G0221' => 'fan', 'FAN20G2492' => 'fan', 'FAN20G2905' => 'fan', 'FAN21G0548' => 'fan', 'FAN21G1300' => 'fan', 'FAN22G0077' => 'fan', 'FAN22G1315' => 'fan', 'FAN24G1280' => 'fan', 'FAN24G1445' => 'fan', 'FAN24G3527' => 'fan', 'FAN25G0464' => 'fan', 'FAN25G2885' => 'fan', 'FAN25G3270' => 'fan', 'FAN27G1101' => 'fan', 'FAN27G2846' => 'fan', 'FAN27G3524' => 'fan', 'FvH4_2g11770' => 'fve', 'FvH4_2g15630' => 'fve', 'FvH4_3g05570' => 'fve', 'FvH4_3g09110' => 'fve', 'FvH4_3g19940' => 'fve', 'FvH4_4g04821' => 'fve', 'FvH4_4g31480' => 'fve', 'FvH4_7g01740' => 'fve', 'Glyma.05G130400' => 'gma', 'Glyma.05G156400' => 'gma', 'Glyma.07G197000' => 'gma', 'Glyma.08G085151' => 'gma', 'Glyma.08G114500' => 'gma', 'Glyma.08G300400' => 'gma', 'Glyma.10G215800' => 'gma', 'Glyma.12G224400' => 'gma', 'Glyma.13G179300' => 'gma', 'Glyma.13G218151' => 'gma', 'Glyma.13G238800' => 'gma', 'Glyma.13G276900' => 'gma', 'Glyma.14G078200' => 'gma', 'Glyma.15G074500' => 'gma', 'Glyma.15G094100' => 'gma', 'Glyma.17G247200' => 'gma', 'Glyma.18G120100' => 'gma', 'Glyma.20G176000' => 'gma', 'Gohir.A01G063600' => 'ghi', 'Gohir.A01G170301' => 'ghi', 'Gohir.A02G060500' => 'ghi', 'Gohir.A05G133850' => 'ghi', 'Gohir.A05G161400' => 'ghi', 'Gohir.A06G012900' => 'ghi', 'Gohir.A06G035901' => 'ghi', 'Gohir.A06G127100' => 'ghi', 'Gohir.A06G210500' => 'ghi', 'Gohir.A08G008650' => 'ghi', 'Gohir.A09G072700' => 'ghi', 'Gohir.A09G088301' => 'ghi', 'Gohir.A10G040600' => 'ghi', 'Gohir.A12G036300' => 'ghi', 'Gohir.A12G143350' => 'ghi', 'Gohir.A12G165500' => 'ghi', 'Gohir.A13G145700' => 'ghi', 'Gohir.D01G050000' => 'ghi', 'Gohir.D01G051366' => 'ghi', 'Gohir.D01G161350' => 'ghi', 'Gohir.D02G065900' => 'ghi', 'Gohir.D05G164200' => 'ghi', 'Gohir.D05G355500' => 'ghi', 'Gohir.D06G010400' => 'ghi', 'Gohir.D06G111250' => 'ghi', 'Gohir.D06G132000' => 'ghi', 'Gohir.D06G210500' => 'ghi', 'Gohir.D07G165675' => 'ghi', 'Gohir.D08G062240' => 'ghi', 'Gohir.D08G086101' => 'ghi', 'Gohir.D08G138060' => 'ghi', 'Gohir.D09G072300' => 'ghi', 'Gohir.D10G041400' => 'ghi', 'Gohir.D11G191020' => 'ghi', 'Gohir.D11G212066' => 'ghi', 'Gohir.D12G036300' => 'ghi', 'Gohir.D12G168600' => 'ghi', 'Gohir.D13G150600' => 'ghi', 'Gorai.001G057300' => 'gra', 'Gorai.002G069900' => 'gra', 'Gorai.002G200000' => 'gra', 'Gorai.003G067600' => 'gra', 'Gorai.005G074800' => 'gra', 'Gorai.006G087300' => 'gra', 'Gorai.008G037500' => 'gra', 'Gorai.008G181400' => 'gra', 'Gorai.009G169400' => 'gra', 'Gorai.009G387900' => 'gra', 'Gorai.010G013300' => 'gra', 'Gorai.010G153800' => 'gra', 'Gorai.010G255800' => 'gra', 'Gorai.011G043700' => 'gra', 'Gorai.011G198900' => 'gra', 'Gorai.013G168400' => 'gra', 'GSVIVG01005212001' => 'vvi', 'GSVIVG01006163001' => 'vvi', 'GSVIVG01009625001' => 'vvi', 'GSVIVG01014338001' => 'vvi', 'GSVIVG01020005001' => 'vvi', 'GSVIVG01021450001' => 'vvi', 'GSVIVG01023975001' => 'vvi', 'GSVIVG01034490001' => 'vvi', 'HanXRQChr04g0112071' => 'han', 'HanXRQChr05g0131151' => 'han', 'HanXRQChr09g0262371' => 'han', 'HanXRQChr09g0268401' => 'han', 'HanXRQChr10g0279241' => 'han', 'HanXRQChr10g0297961' => 'han', 'HanXRQChr11g0326231' => 'han', 'HanXRQChr11g0328471' => 'han', 'HanXRQChr16g0507941' => 'han', 'HanXRQChr17g0560211' => 'han', 'Haze_02108' => 'cav', 'Haze_02428' => 'cav', 'Haze_05593' => 'cav', 'Haze_06448' => 'cav', 'Haze_09427' => 'cav', 'Haze_12022' => 'cav', 'Haze_17612' => 'cav', 'Haze_17928' => 'cav', 'Hma1.2p1_0032F.1_g019250' => 'hma', 'Hma1.2p1_0163F.1_g072690' => 'hma', 'Hma1.2p1_0265F.1_g106710' => 'hma', 'Hma1.2p1_0286F.1_g113970' => 'hma', 'Hma1.2p1_0363F.1_g136640' => 'hma', 'Hma1.2p1_0584F.1_g183470' => 'hma', 'Hma1.2p1_0885F.1_g232570' => 'hma', 'HPP92_006022' => 'vpl', 'HPP92_007320' => 'vpl', 'HPP92_011521' => 'vpl', 'HPP92_019387' => 'vpl', 'HPP92_024038' => 'vpl', 'Hund05891' => 'sun', 'Hund06450' => 'sun', 'Hund12053' => 'sun', 'Hund16800' => 'sun', 'Hund21222' => 'sun', 'Hund22896' => 'sun', 'Hund23746' => 'sun', 'Hund27083' => 'sun', 'Lalb_Chr02g0141831' => 'lal', 'Lalb_Chr02g0141841' => 'lal', 'Lalb_Chr05g0220411' => 'lal', 'Lalb_Chr06g0162081' => 'lal', 'Lalb_Chr09g0327651' => 'lal', 'Lalb_Chr13g0295051' => 'lal', 'Lalb_Chr15g0086801' => 'lal', 'Lalb_Chr16g0383781' => 'lal', 'Lalb_Chr16g0383791' => 'lal', 'Lalb_Chr18g0055441' => 'lal', 'Lalb_Chr18g0059611' => 'lal', 'Lalb_Chr20g0109661' => 'lal', 'Lalb_Chr20g0109831' => 'lal', 'Lalb_Chr20g0121871' => 'lal', 'Lalb_Chr22g0355361' => 'lal', 'Lalb_Chr25g0286371' => 'lal', 'Lj1A1187G43' => 'lonja', 'Lj1A1205T50' => 'lonja', 'Lj1A800G33' => 'lonja', 'Lj1C1187T7' => 'lonja', 'Lj1C843T11' => 'lonja', 'Lj1g0010940' => 'lja', 'Lj2A288T69' => 'lonja', 'Lj3g0024276' => 'lja', 'Lj4A47T76' => 'lonja', 'Lj4g0005805' => 'lja', 'Lj4g0006097' => 'lja', 'Lj4g0008528' => 'lja', 'Lj4g0024907' => 'lja', 'Lj5g0012472' => 'lja', 'Lj5g0018648' => 'lja', 'Lj6C789G1' => 'lonja', 'Lj6g0004000' => 'lja', 'Lj7A292G67' => 'lonja', 'Lj7A292T64' => 'lonja', 'Lj9A400T58' => 'lonja', 'Lsat_1_v5_gn_1_126181' => 'lsa', 'Lsat_1_v5_gn_4_123041' => 'lsa', 'Lsat_1_v5_gn_4_133620' => 'lsa', 'Lsat_1_v5_gn_4_53221' => 'lsa', 'Lsat_1_v5_gn_4_71961' => 'lsa', 'Lsat_1_v5_gn_7_105241' => 'lsa', 'Lsat_1_v5_gn_7_21361' => 'lsa', 'Lsat_1_v5_gn_7_28860' => 'lsa', 'Lsat_1_v5_gn_7_31260' => 'lsa', 'Lsat_1_v5_gn_8_52801' => 'lsa', 'Manes.02G191400' => 'mes', 'Manes.03G110100' => 'mes', 'Manes.04G071100' => 'mes', 'Manes.05G100500' => 'mes', 'Manes.05G164700' => 'mes', 'Manes.15G087000' => 'mes', 'Manes.15G121500' => 'mes', 'Manes.16G028300' => 'mes', 'Manes.17G046100' => 'mes', 'Manes.17G069800' => 'mes', 'Manes.18G100500' => 'mes', 'Mapoly0002s0109' => 'mpo', 'Mapoly0024s0007' => 'mpo', 'Mapoly0089s0032' => 'mpo', 'MBI04_g42241_MAGBIO' => 'mbi', 'MBI05_g11988_MAGBIO' => 'mbi', 'MBI05_g35452_MAGBIO' => 'mbi', 'MBI07_g30179_MAGBIO' => 'mbi', 'MBI07_g35859_MAGBIO' => 'mbi', 'MBI07_g35860_MAGBIO' => 'mbi', 'MBI07_g37166_MAGBIO' => 'mbi', 'MBI08_g18172_MAGBIO' => 'mbi', 'MBI09_g08441_MAGBIO' => 'mbi', 'MBI13_g01676_MAGBIO' => 'mbi', 'MBI14_g42955_MAGBIO' => 'mbi', 'MBI16_g13161_MAGBIO' => 'mbi', 'MBI17_g27204_MAGBIO' => 'mbi', 'MBI19_g21595_MAGBIO' => 'mbi', 'MD00G1148400' => 'mdo', 'MD02G1301200' => 'mdo', 'MD03G1227800' => 'mdo', 'MD05G1041100' => 'mdo', 'MD05G1124800' => 'mdo', 'MD05G1284000' => 'mdo', 'MD05G1338800' => 'mdo', 'MD05G1338900' => 'mdo', 'MD07G1022800' => 'mdo', 'MD10G1047500' => 'mdo', 'MD10G1127500' => 'mdo', 'MD10G1262300' => 'mdo', 'MD10G1293800' => 'mdo', 'MD16G1074300' => 'mdo', 'Medtr1g021670' => 'mtr', 'Medtr1g096320' => 'mtr', 'Medtr2g013690' => 'mtr', 'Medtr2g019450' => 'mtr', 'Medtr2g085170' => 'mtr', 'Medtr4g088785' => 'mtr', 'Medtr8g055930' => 'mtr', 'Medtr8g085850' => 'mtr', 'MELO3C002605.2' => 'cme', 'MELO3C003891.2' => 'cme', 'MELO3C004012.2' => 'cme', 'MELO3C007134.2' => 'cme', 'MELO3C008118.2' => 'cme', 'MELO3C016700.2' => 'cme', 'MELO3C024127.2' => 'cme', 'MELO3C033361.2' => 'cme', 'MELO3C033362.2' => 'cme', 'Migut.C00430' => 'egut', 'Migut.C01246' => 'egut', 'Migut.E00101' => 'egut', 'Migut.H01486' => 'egut', 'Migut.H01939' => 'egut', 'Migut.K00360' => 'egut', 'Migut.M00910' => 'egut', 'Migut.M01139' => 'egut', 'Migut.N02677' => 'egut', 'MSTRG.13252' => 'ama', 'MSTRG.14701' => 'ama', 'MSTRG.1521' => 'ama', 'MSTRG.15884' => 'ama', 'MSTRG.16242' => 'ama', 'MSTRG.22285' => 'ama', 'MSTRG.22444' => 'ama', 'MSTRG.2349' => 'ama', 'MSTRG.26308' => 'ama', 'MSTRG.28296' => 'ama', 'MSTRG.9895' => 'ama', 'Nitab4.5_0000110g0060' => 'nta', 'Nitab4.5_0000420g0130' => 'nta', 'Nitab4.5_0000422g0030' => 'nta', 'Nitab4.5_0000560g0180' => 'nta', 'Nitab4.5_0000703g0100' => 'nta', 'Nitab4.5_0000786g0200' => 'nta', 'Nitab4.5_0001336g0020' => 'nta', 'Nitab4.5_0001796g0030' => 'nta', 'Nitab4.5_0003348g0060' => 'nta', 'Nitab4.5_0003698g0040' => 'nta', 'Nitab4.5_0003942g0090' => 'nta', 'Nitab4.5_0004775g0070' => 'nta', 'Nitab4.5_0004864g0030' => 'nta', 'Nitab4.5_0005615g0020' => 'nta', 'Nitab4.5_0009288g0030' => 'nta', 'Nitab4.5_0009341g0010' => 'nta', 'Nitab4.5_0009535g0010' => 'nta', 'Nn1g03995' => 'nnu', 'Nn1g04100' => 'nnu', 'Nn1g06530' => 'nnu', 'Nn3g16404' => 'nnu', 'Nn3g17212' => 'nnu', 'Nn3g20776' => 'nnu', 'Nn3g21923' => 'nnu', 'Nn5g27737' => 'nnu', 'Nn5g29461' => 'nnu', 'Nn7g38355' => 'nnu', 'Nn8g39873' => 'nnu', 'Oeu000548.2' => 'oeu', 'Oeu004672.1' => 'oeu', 'Oeu015605.2' => 'oeu', 'Oeu016092.1' => 'oeu', 'Oeu017879.3' => 'oeu', 'Oeu024910.1' => 'oeu', 'Oeu028965.1' => 'oeu', 'Oeu031269.1' => 'oeu', 'Oeu031270.1' => 'oeu', 'Oeu032535.1' => 'oeu', 'Oeu034151.1' => 'oeu', 'Oeu034152.1' => 'oeu', 'Oeu034588.2' => 'oeu', 'Oeu050846.1' => 'oeu', 'Oeu050849.2' => 'oeu', 'Oeu051063.2' => 'oeu', 'Oeu052368.1' => 'oeu', 'Oeu052370.1' => 'oeu', 'Os01g0210400' => 'osa', 'Os01g0304300' => 'osa', 'Os01g0749100' => 'osa', 'Os02g0745800' => 'osa', 'Os03g0769050' => 'osa', 'Os05g0531500' => 'osa', 'Os06g0724300' => 'osa', 'Os11g0198100' => 'osa', 'Peaxi162Scf00069g01425' => 'pax', 'Peaxi162Scf00280g00811' => 'pax', 'Peaxi162Scf00310g00615' => 'pax', 'Peaxi162Scf00362g00542' => 'pax', 'Peaxi162Scf00461g00310' => 'pax', 'Peaxi162Scf00530g00118' => 'pax', 'Peaxi162Scf00541g00057' => 'pax', 'Peaxi162Scf00661g00017' => 'pax', 'Peaxi162Scf00926g00027' => 'pax', 'Peaxi162Scf01064g00263' => 'pax', 'Peaxi162Scf01211g00135' => 'pax', 'PGR004G2336' => 'pgr', 'PGR042G0327' => 'pgr', 'PGR042G1957' => 'pgr', 'PGR042G2003' => 'pgr', 'PGR042G3929' => 'pgr', 'PGR083G1137' => 'pgr', 'PGR083G1364' => 'pgr', 'PGSC0003DMG400003381' => 'stu', 'PGSC0003DMG400003417' => 'stu', 'PGSC0003DMG400008981' => 'stu', 'PGSC0003DMG400012417' => 'stu', 'PGSC0003DMG400012823' => 'stu', 'PGSC0003DMG400016885' => 'stu', 'PGSC0003DMG400022812' => 'stu', 'PGSC0003DMG400029726' => 'stu', 'PGSC0003DMG401009243' => 'stu', 'PGSC0003DMG401031505' => 'stu', 'PGSC0003DMG402031505' => 'stu', 'Phvul.001G017600' => 'pvu', 'Phvul.002G193500' => 'pvu', 'Phvul.002G228900' => 'pvu', 'Phvul.002G236800' => 'pvu', 'Phvul.003G049500' => 'pvu', 'Phvul.005G072000' => 'pvu', 'Phvul.006G164800' => 'pvu', 'Phvul.006G185100' => 'pvu', 'Phvul.007G090000' => 'pvu', 'Potri.001G399800' => 'ptr', 'Potri.002G149900' => 'ptr', 'Potri.004G044100' => 'ptr', 'Potri.004G177600' => 'ptr', 'Potri.009G138000' => 'ptr', 'Potri.010G094000' => 'ptr', 'Potri.011G053000' => 'ptr', 'Potri.011G119300' => 'ptr', 'Potri.013G113700' => 'ptr', 'Potri.018G107800' => 'ptr', 'Potri.019G084100' => 'ptr', 'Pp3c14_23720' => 'ppa', 'Pp3c16_6340' => 'ppa', 'Pp3c23_13420' => 'ppa', 'Pp3c24_2740' => 'ppa', 'Pp3c25_860' => 'ppa', 'Pp3c8_21750' => 'ppa', 'Prupe.1G273000' => 'ppe', 'Prupe.1G273700' => 'ppe', 'Prupe.1G274100' => 'ppe', 'Prupe.2G023300' => 'ppe', 'Prupe.4G048000' => 'ppe', 'Prupe.4G080400' => 'ppe', 'Prupe.4G181200' => 'ppe', 'Prupe.8G056900' => 'ppe', 'Prupe.8G168700' => 'ppe', 'Psat1g189080' => 'psa', 'Psat1g204760' => 'psa', 'Psat4g175560' => 'psa', 'Psat4g177720' => 'psa', 'Psat5g244240' => 'psa', 'Psat6g010720' => 'psa', 'Psat6g187200' => 'psa', 'Psat7g072040' => 'psa', 'PSO017G3501' => 'pso', 'PSO063G2148' => 'pso', 'PSO063G5608' => 'pso', 'PSO210G6392' => 'pso', 'PSO541G2319' => 'pso', 'PSO541G2836' => 'pso', 'PSO541G4012' => 'pso', 'PSO541G6253' => 'pso', 'PSO675G0580' => 'pso', 'PSO675G0856' => 'pso', 'PSO675G5635' => 'pso', 'PSO675G9157' => 'pso', 'PSO832G1660' => 'pso', 'PSO832G1969' => 'pso', 'QL02p007186' => 'qlo', 'QL02p033904' => 'qlo', 'QL03p064391' => 'qlo', 'QL05p040593' => 'qlo', 'QL05p058242' => 'qlo', 'QL08p021825' => 'qlo', 'QL11p004981' => 'qlo', 'RcHm_v2.0_Chr1g0318301' => 'rch', 'RcHm_v2.0_Chr4g0418501' => 'rch', 'RcHm_v2.0_Chr4g0439971' => 'rch', 'RcHm_v2.0_Chr5g0008541' => 'rch', 'RcHm_v2.0_Chr5g0014101' => 'rch', 'RcHm_v2.0_Chr5g0014131' => 'rch', 'RcHm_v2.0_Chr5g0033621' => 'rch', 'RcHm_v2.0_Chr6g0272041' => 'rch', 'RcHm_v2.0_Chr6g0278831' => 'rch', 'Rhsim02G0130400' => 'rsi', 'Rhsim02G0171100' => 'rsi', 'Rhsim05G0053000' => 'rsi', 'Rhsim05G0053100' => 'rsi', 'Rhsim06G0096500' => 'rsi', 'Rhsim06G0096600' => 'rsi', 'Rhsim06G0199100' => 'rsi', 'Rhsim12G0062300' => 'rsi', 'Rhsim12G0062800' => 'rsi', 'Sabra02G0118600' => 'sbr', 'Sabra04G0027300' => 'sbr', 'Sabra04G0119500' => 'sbr', 'Sabra08G0112500' => 'sbr', 'Sabra11G0036800' => 'sbr', 'Sabra11G0103800' => 'sbr', 'Sabra13G0096300' => 'sbr', 'Sabra16G0262300' => 'sbr', 'Sabra18G0091700' => 'sbr', 'Sabra19G0095400' => 'sbr', 'SalBow6G3080' => 'sbo', 'SalBow7G1157' => 'sbo', 'SalBow7G2123' => 'sbo', 'SalBow7G2285' => 'sbo', 'SalBow7G3537' => 'sbo', 'SalBow8G2947' => 'sbo', 'SalBow8G4463' => 'sbo', 'SalBow8G5466' => 'sbo', 'Sc01g0001750' => 'sci', 'Sc02g0006640' => 'sci', 'Sc02g0006670' => 'sci', 'Sc04g0008220' => 'sci', 'Sc05g0006190' => 'sci', 'Sc08g0002760' => 'sci', 'Sc17g0006170' => 'sci', 'Sc22g0002050' => 'sci', 'Sc23g0001190' => 'sci', 'Sc24g0000980' => 'sci', 'Sed0006245' => 'sed', 'Sed0007543' => 'sed', 'Sed0009411' => 'sed', 'Sed0010765' => 'sed', 'Sed0012944' => 'sed', 'Sed0014682' => 'sed', 'Sed0016174' => 'sed', 'Sed0016796' => 'sed', 'Sed0020317' => 'sed', 'Sed0021467' => 'sed', 'SEGI_01316' => 'sgi', 'SEGI_03374' => 'sgi', 'SEGI_16265' => 'sgi', 'SEGI_18569' => 'sgi', 'SEGI_20351' => 'sgi', 'SEGI_26395' => 'sgi', 'SEGI_29469' => 'sgi', 'SEGI_34771' => 'sgi', 'SEGI_36769' => 'sgi', 'SEGI_37139' => 'sgi', 'SGA_v2.0_scaffold100G29687' => 'sas', 'SGA_v2.0_scaffold118G32472' => 'sas', 'SGA_v2.0_scaffold14G07051' => 'sas', 'SGA_v2.0_scaffold183G39845' => 'sas', 'SGA_v2.0_scaffold1G00174' => 'sas', 'SGA_v2.0_scaffold22G09714' => 'sas', 'SGA_v2.0_scaffold333G48992' => 'sas', 'SGA_v2.0_scaffold46G17491' => 'sas', 'SGA_v2.0_scaffold49G18294' => 'sas', 'SGA_v2.0_scaffold63G21658' => 'sas', 'SHI01741' => 'shi', 'SHI05771' => 'shi', 'SHI18077' => 'shi', 'SHI20525' => 'shi', 'SHI20527' => 'shi', 'SHI20528' => 'shi', 'SMO172G0185' => 'smo', 'SMO198G0020' => 'smo', 'SMO351G0006' => 'smo', 'SMO356G0118' => 'smo', 'SMO358G0296' => 'smo', 'SMO367G0079' => 'smo', 'SMO367G1277' => 'smo', 'Solyc01g014220.3' => 'sly', 'Solyc01g111770.2' => 'sly', 'Solyc02g078180.3' => 'sly', 'Solyc03g006430.3' => 'sly', 'Solyc03g006456.1' => 'sly', 'Solyc03g079860.2' => 'sly', 'Solyc04g079770.3' => 'sly', 'Solyc05g007430.4' => 'sly', 'Solyc07g063150.3' => 'sly', 'Solyc08g016620.3' => 'sly', 'Solyc09g057590.3' => 'sly', 'Solyc09g057600.1' => 'sly', 'Solyc10g009050.3' => 'sly', 'Solyc11g017420.2' => 'sly', 'Sopen01g053810' => 'spe', 'Sopen02g023040' => 'spe', 'Sopen03g002440' => 'spe', 'Sopen04g033350' => 'spe', 'Sopen05g003310' => 'spe', 'Sopen07g004050' => 'spe', 'Sopen07g031340' => 'spe', 'Sopen08g006990' => 'spe', 'Sopen10g004830' => 'spe', 'Sopen11g009370' => 'spe', 'Sp1g24450' => 'spa', 'Sp1g29670' => 'spa', 'Sp1g39600' => 'spa', 'Sp2g11080' => 'spa', 'Sp2g13970' => 'spa', 'Sp4g16130' => 'spa', 'Sp6g13080' => 'spa', 'Sp7g37270' => 'spa', 'TAR371G0065' => 'tar', 'TAR376G0340' => 'tar', 'TAR376G0435' => 'tar', 'TAR381G0002' => 'tar', 'TAR381G1236' => 'tar', 'TAR624G0055' => 'tar', 'TAR624G0324' => 'tar', 'TAR624G0696' => 'tar', 'TAR624G0906' => 'tar', 'TAR625G0107' => 'tar', 'TAR626G0015' => 'tar', 'TAR626G1356' => 'tar', 'TAR627G0888' => 'tar', 'TAR628G0399' => 'tar', 'TAR628G1327' => 'tar', 'TAR629G2831' => 'tar', 'TAR629G2874' => 'tar', 'TAR633G1432' => 'tar', 'TAR633G2771' => 'tar', 'THA.LOC104803394' => 'tha', 'THA.LOC104805153' => 'tha', 'THA.LOC104806784' => 'tha', 'THA.LOC104810473' => 'tha', 'THA.LOC104813100' => 'tha', 'THA.LOC104814215' => 'tha', 'THA.LOC104815554' => 'tha', 'THA.LOC104820544' => 'tha', 'THA.LOC104824754' => 'tha', 'THA.LOC104827717' => 'tha', 'Thecc.02G031400' => 'tca', 'Thecc.02G055900' => 'tca', 'Thecc.02G350800' => 'tca', 'Thecc.06G150900' => 'tca', 'Thecc.06G186600' => 'tca', 'Thecc.07G089600' => 'tca', 'Thecc.08G020400' => 'tca', 'Thecc.08G182100' => 'tca', 'Thhalv10000873m.g' => 'esa', 'Thhalv10004185m.g' => 'esa', 'Thhalv10006981m.g' => 'esa', 'Thhalv10007204m.g' => 'esa', 'Thhalv10011374m.g' => 'esa', 'Thhalv10013482m.g' => 'esa', 'Thhalv10017801m.g' => 'esa', 'Thhalv10024983m.g' => 'esa', 'TPR.G12072' => 'tpr', 'TPR.G15769' => 'tpr', 'TPR.G16504' => 'tpr', 'TPR.G16506' => 'tpr', 'TPR.G24345' => 'tpr', 'TPR.G26666' => 'tpr', 'TPR.G27320' => 'tpr', 'TPR.G31819' => 'tpr', 'TPR.G38879' => 'tpr', 'TPR.G39015' => 'tpr', 'TPR.G8819' => 'tpr', 'TWI09G0924' => 'twi', 'TWI12G0811' => 'twi', 'TWI12G1294' => 'twi', 'TWI31G0150' => 'twi', 'TWI36G1262' => 'twi', 'TWI38G1287' => 'twi', 'TWI38G1633' => 'twi', 'TWI38G1982' => 'twi', 'TWI39G0116' => 'twi', 'TWI60G1011' => 'twi', 'TWI63G0171' => 'twi', 'TWI73G0839' => 'twi', 'TWI79G1511' => 'twi', 'unitig_0.g915' => 'ugi', 'unitig_0.g916' => 'ugi', 'unitig_21.g20219' => 'ugi', 'unitig_21.g20416' => 'ugi', 'unitig_578.g16132' => 'ugi', 'unitig_578.g16718' => 'ugi', 'unitig_62.g23481' => 'ugi', 'unitig_744.g24535' => 'ugi', 'unitig_749.g13525' => 'ugi', 'vmacro01248' => 'vma', 'vmacro02290' => 'vma', 'vmacro10946' => 'vma', 'vmacro11865' => 'vma', 'vmacro12493' => 'vma', 'vmacro17322' => 'vma', 'vmacro21599' => 'vma', 'vmacro23041' => 'vma', 'VMungo0251G0004' => 'vmu', 'VMungo0251G2639' => 'vmu', 'VMungo0251G2967' => 'vmu', 'VMungo0540G0864' => 'vmu', 'VMungo0540G1569' => 'vmu', 'VMungo0647G0317' => 'vmu', 'VMungo0720G1373' => 'vmu', 'VMungo0720G1508' => 'vmu', 'VMungo1080G0485' => 'vmu', 'VMungo1215G3177' => 'vmu', 'Zm00001eb112600' => 'zma', 'Zm00001eb120220' => 'zma', 'Zm00001eb153240' => 'zma', 'Zm00001eb168880' => 'zma', 'Zm00001eb213920' => 'zma', 'Zm00001eb228280' => 'zma', 'Zm00001eb254580' => 'zma', 'Zm00001eb272180' => 'zma', 'Zm00001eb293190' => 'zma', 'Zm00001eb322930' => 'zma', 'Zm00001eb353360' => 'zma', 'Zm00001eb353390' => 'zma', 'Zm00001eb353430' => 'zma', 'Zm00001eb353440' => 'zma', 'Zm00001eb353780' => 'zma' ), 'gf_id' => 'HOM05D000499', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000499' ), 'data_identifier' => 'HOM05D000499', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000499', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1066', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p29780' => 'bna', 'A02p33180' => 'bna', 'A03p16470' => 'bna', 'A03p66010' => 'bna', 'A04p25970' => 'bna', 'A06p01270' => 'bna', 'A06p46080' => 'bna', 'A07p11400' => 'bna', 'A08p01840' => 'bna', 'A08p08230' => 'bna', 'A08p25740' => 'bna', 'A09p32070' => 'bna', 'A09p37830' => 'bna', 'A09p42840' => 'bna', 'A09p42850' => 'bna', 'Aa31LG10G2060' => 'aar', 'Aa31LG2G7410' => 'aar', 'Aa31LG6G10200' => 'aar', 'Aa31LG6G16680' => 'aar', 'Aa31LG6G8470' => 'aar', 'Aa31LG9G12730' => 'aar', 'Aa31LG9G13680' => 'aar', 'Aa31LG9G14920' => 'aar', 'Aa31LG9G6650' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4977' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5467' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3254' => 'aag', 'Actinidia02578' => 'ach', 'Actinidia07693' => 'ach', 'Actinidia08413' => 'ach', 'Actinidia08414' => 'ach', 'Actinidia15289' => 'ach', 'Actinidia19871' => 'ach', 'Actinidia21475' => 'ach', 'Actinidia22576' => 'ach', 'Actinidia28327' => 'ach', 'Actinidia32491' => 'ach', 'Actinidia39463' => 'ach', 'Actinidia39571' => 'ach', 'Ah.01g013750' => 'amhyb', 'Ah.01g023210' => 'amhyb', 'Ah.04g164850' => 'amhyb', 'Ah.05g178060' => 'amhyb', 'Ah.07g204270' => 'amhyb', 'Ah.07g208480' => 'amhyb', 'Ah.09g237410' => 'amhyb', 'Ah.14g089460' => 'amhyb', 'AL1G41790' => 'aly', 'AL1G49050' => 'aly', 'AL1G53810' => 'aly', 'AL1G61400' => 'aly', 'AL4G18580' => 'aly', 'AL5G12510' => 'aly', 'AL5G12540' => 'aly', 'AL6G43230' => 'aly', 'AL7G10370' => 'aly', 'AL7G19250' => 'aly', 'AL8G12240' => 'aly', 'AL8G18540' => 'aly', 'Aqoxy1G02409' => 'aox', 'Aqoxy2G03993' => 'aox', 'Aqoxy3G03357' => 'aox', 'Aqoxy4G00785' => 'aox', 'Aqoxy5G02598' => 'aox', 'Aqoxy6G00132' => 'aox', 'Aqoxy7G01776' => 'aox', 'Aqoxy7G02316' => 'aox', 'Aqoxy7G03973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.12AFKW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B8730' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27IQR1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3F75VG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3RE0GA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41TCQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.527VTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FIR39' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5W8UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DA38EV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ63HS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H1I32C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HC27T5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4M8AP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7N3CZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9UVDZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LS1NQA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT1D4B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SKC4TM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCFV76' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF9Q1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQWD9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1ZM88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WE07RT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YCK7VH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJE6Q6' => 'arhy', 'AT1G28240' => 'ath', 'AT1G34550' => 'ath', 'AT1G53040' => 'ath', 'AT2G02910' => 'ath', 'AT4G09630' => 'ath', 'AT4G38500' => 'ath', 'AT5G42660' => 'ath', 'AT5G46220' => 'ath', 'ATR0152G026' => 'atr', 'ATR0564G343' => 'atr', 'ATR0706G151' => 'atr', 'ATR0733G207' => 'atr', 'ATR0751G234' => 'atr', 'ATR0807G048' => 'atr', 'ATR1091G084' => 'atr', 'Atru.chr10.1229' => 'acertr', 'Atru.chr10.1230' => 'acertr', 'Atru.chr10.1874' => 'acertr', 'Atru.chr11.1808' => 'acertr', 'Atru.chr13.1795' => 'acertr', 'Atru.chr13.570' => 'acertr', 'Atru.chr2.2608' => 'acertr', 'Atru.chr2.2609' => 'acertr', 'Atru.chr5.3428' => 'acertr', 'Atru.chr8.1171' => 'acertr', 'AUR62004651' => 'cqu', 'AUR62008675' => 'cqu', 'AUR62010014' => 'cqu', 'AUR62013004' => 'cqu', 'AUR62014825' => 'cqu', 'AUR62015015' => 'cqu', 'AUR62015151' => 'cqu', 'AUR62017020' => 'cqu', 'AUR62019422' => 'cqu', 'AUR62023570' => 'cqu', 'AUR62025571' => 'cqu', 'AUR62029098' => 'cqu', 'AUR62033863' => 'cqu', 'AUR62034296' => 'cqu', 'AUR62040075' => 'cqu', 'BcaB02g07334' => 'bca', 'BcaB02g10575' => 'bca', 'BcaB03g12119' => 'bca', 'BcaB03g12120' => 'bca', 'BcaB03g13945' => 'bca', 'BcaB04g17123' => 'bca', 'BcaB04g17867' => 'bca', 'BcaB04g19839' => 'bca', 'BcaB07g30317' => 'bca', 'BcaB07g32432' => 'bca', 'BcaB07g33362' => 'bca', 'BcaB08g36611' => 'bca', 'BcaC01g00028' => 'bca', 'BcaC01g01356' => 'bca', 'BcaC01g02034' => 'bca', 'BcaC01g06051' => 'bca', 'BcaC03g16839' => 'bca', 'BcaC03g17176' => 'bca', 'BcaC05g26829' => 'bca', 'BcaC06g31490' => 'bca', 'BcaC06g35344' => 'bca', 'BcaC06g36570' => 'bca', 'BcaC07g37537' => 'bca', 'BcaC08g43491' => 'bca', 'BcaC08g43773' => 'bca', 'BcaNung00234' => 'bca', 'BcaNung01982' => 'bca', 'BcaNung03707' => 'bca', 'BcaNung06454' => 'bca', 'BolC2t10762H' => 'bol', 'BolC2t11191H' => 'bol', 'BolC3t14322H' => 'bol', 'BolC3t19747H' => 'bol', 'BolC3t21425H' => 'bol', 'BolC4t27800H' => 'bol', 'BolC5t31423H' => 'bol', 'BolC6t35951H' => 'bol', 'BolC6t36282H' => 'bol', 'BolC7t40678H' => 'bol', 'BolC7t40679H' => 'bol', 'BolC7t42222H' => 'bol', 'BolC7t43492H' => 'bol', 'BolC7t46785H' => 'bol', 'BolC8t47853H' => 'bol', 'BolC9t56805H' => 'bol', 'BraA02t08000Z' => 'bra', 'BraA02t08341Z' => 'bra', 'BraA03t10936Z' => 'bra', 'BraA03t15657Z' => 'bra', 'BraA04t18100Z' => 'bra', 'BraA05t20523Z' => 'bra', 'BraA06t23353Z' => 'bra', 'BraA06t27473Z' => 'bra', 'BraA06t27769Z' => 'bra', 'BraA07t28928Z' => 'bra', 'BraA08t32236Z' => 'bra', 'BraA08t32841Z' => 'bra', 'BraA08t34524Z' => 'bra', 'BraA09t38742Z' => 'bra', 'BraA09t39295Z' => 'bra', 'C02p47180' => 'bna', 'C02p50990' => 'bna', 'C03p19360' => 'bna', 'C03p74950' => 'bna', 'C03p91000' => 'bna', 'C04p63260' => 'bna', 'C05p27050' => 'bna', 'C06p08750' => 'bna', 'C06p11490' => 'bna', 'C07p02820' => 'bna', 'C07p17180' => 'bna', 'C07p29440' => 'bna', 'C07p63730' => 'bna', 'C09p39260' => 'bna', 'CAN.G1164.34' => 'can', 'CAN.G1164.39' => 'can', 'CAN.G1530.3' => 'can', 'CAN.G162.61' => 'can', 'CAN.G176.6' => 'can', 'CAN.G289.49' => 'can', 'CAN.G370.21' => 'can', 'CAN.G370.22' => 'can', 'CAN.G371.117' => 'can', 'CAN.G58.37' => 'can', 'CAN.G588.98' => 'can', 'CANSAT21G2266' => 'cansat', 'CANSAT25G2799' => 'cansat', 'CANSAT35G0862' => 'cansat', 'CANSAT35G1704' => 'cansat', 'CANSAT35G1760' => 'cansat', 'CANSAT56G3971' => 'cansat', 'CANSAT56G4116' => 'cansat', 'CANSAT80G1259' => 'cansat', 'CARHR027730' => 'chi', 'CARHR033880' => 'chi', 'CARHR043270' => 'chi', 'CARHR145330' => 'chi', 'CARHR145340' => 'chi', 'CARHR175570' => 'chi', 'CARHR181570' => 'chi', 'CARHR258470' => 'chi', 'CARHR260490' => 'chi', 'CARHR294220' => 'chi', 'Carub.0001s2668' => 'cru', 'Carub.0001s3257' => 'cru', 'Carub.0001s4220' => 'cru', 'Carub.0005s0179' => 'cru', 'Carub.0006s2807' => 'cru', 'Carub.0007s0039' => 'cru', 'Carub.0008s0169' => 'cru', 'Carub.0008s0636' => 'cru', 'Ca_00338_v3' => 'car', 'Ca_00542_v3' => 'car', 'Ca_01844_v3' => 'car', 'Ca_10611_v3' => 'car', 'Ca_13326_v3' => 'car', 'Ca_17944_v3' => 'car', 'Ca_18546_v3' => 'car', 'Ca_24219_v3' => 'car', 'Ca_29972_v3' => 'car', 'CBR_g3681' => 'cbr', 'CBR_g40021' => 'cbr', 'Cc01_g08140' => 'ccan', 'Cc02_g13410' => 'ccan', 'Cc02_g37480' => 'ccan', 'Cc05_g12030' => 'ccan', 'Cc09_g03370' => 'ccan', 'Cc09_g10300' => 'ccan', 'Cc10_g03530' => 'ccan', 'Cc10_g11380' => 'ccan', 'CDE01G0176' => 'cde', 'CDE02G0675' => 'cde', 'CDE02G0942' => 'cde', 'CDE02G1153' => 'cde', 'CDE02G4177' => 'cde', 'CDE04G2117' => 'cde', 'CDE04G2736' => 'cde', 'CDE08G1161' => 'cde', 'CDE09G1238' => 'cde', 'Cfa000467' => 'cfa', 'Cfa000947' => 'cfa', 'Cfa004969' => 'cfa', 'Cfa005284' => 'cfa', 'Cfa008993' => 'cfa', 'Cfa018187' => 'cfa', 'Cfa018454' => 'cfa', 'Cfa020585' => 'cfa', 'Ciclev10000424m.g' => 'ccl', 'Ciclev10003605m.g' => 'ccl', 'Ciclev10007828m.g' => 'ccl', 'Ciclev10014620m.g' => 'ccl', 'Ciclev10015169m.g' => 'ccl', 'Ciclev10018291m.g' => 'ccl', 'Ciclev10028256m.g' => 'ccl', 'Ciclev10033822m.g' => 'ccl', 'CiPaw.05G060300' => 'cil', 'CiPaw.05G085000' => 'cil', 'CiPaw.06G083700' => 'cil', 'CiPaw.06G120300' => 'cil', 'CiPaw.09G060500' => 'cil', 'CiPaw.09G123800' => 'cil', 'CiPaw.11G169700' => 'cil', 'CiPaw.12G118300' => 'cil', 'CiPaw.15G071000' => 'cil', 'CiPaw.15G081900' => 'cil', 'ClCG01G024610' => 'cla', 'ClCG03G006070' => 'cla', 'ClCG05G019250' => 'cla', 'ClCG09G009500' => 'cla', 'ClCG11G008200' => 'cla', 'ClCG11G018080' => 'cla', 'COL.COLO4_17373' => 'col', 'COL.COLO4_22994' => 'col', 'COL.COLO4_26389' => 'col', 'COL.COLO4_27170' => 'col', 'COL.COLO4_31074' => 'col', 'COL.COLO4_31465' => 'col', 'COL.COLO4_36438' => 'col', 'COL.COLO4_36439' => 'col', 'Cpa.g.c38781' => 'cpa', 'Cpa.g.sc128.12' => 'cpa', 'Cpa.g.sc166.7' => 'cpa', 'Cpa.g.sc166.8' => 'cpa', 'Cpa.g.sc20.111' => 'cpa', 'Cpa.g.sc27.31' => 'cpa', 'Cpa.g.sc64.36' => 'cpa', 'Cpa.g.sc64.37' => 'cpa', 'Cpa.g.sc66.49' => 'cpa', 'Cpa.g.sc80.64' => 'cpa', 'CsaV3_1G012320' => 'csa', 'CsaV3_2G008480' => 'csa', 'CsaV3_2G033450' => 'csa', 'CsaV3_3G044830' => 'csa', 'CsaV3_4G033710' => 'csa', 'CsaV3_6G051730' => 'csa', 'CsaV3_7G025350' => 'csa', 'CSS0001067' => 'camsi', 'CSS0005996' => 'camsi', 'CSS0006590' => 'camsi', 'CSS0009673' => 'camsi', 'CSS0010201' => 'camsi', 'CSS0010549' => 'camsi', 'CSS0011364' => 'camsi', 'CSS0014473' => 'camsi', 'CSS0014961' => 'camsi', 'CSS0020191' => 'camsi', 'CSS0021165' => 'camsi', 'CSS0022306' => 'camsi', 'CSS0030591' => 'camsi', 'CSS0030696' => 'camsi', 'CSS0032653' => 'camsi', 'CSS0037487' => 'camsi', 'CSS0041102' => 'camsi', 'CSS0041261' => 'camsi', 'CSS0046246' => 'camsi', 'CSS0049256' => 'camsi', 'DCAR_004075' => 'dca', 'DCAR_011538' => 'dca', 'DCAR_019553' => 'dca', 'DCAR_020952' => 'dca', 'DCAR_021739' => 'dca', 'DCAR_027407' => 'dca', 'DCAR_027913' => 'dca', 'DCAR_028066' => 'dca', 'Dinv05899' => 'din', 'Dinv07563' => 'din', 'Dinv08010' => 'din', 'Dinv14125' => 'din', 'Dinv20172' => 'din', 'Dinv30743' => 'din', 'Dinv31229' => 'din', 'Dinv34162' => 'din', 'Dinv36028' => 'din', 'Dinv39368' => 'din', 'Dinv40565' => 'din', 'Dinv41706' => 'din', 'Duzib052G0089' => 'dzi', 'Duzib116G0641' => 'dzi', 'Duzib132G0069' => 'dzi', 'Duzib132G1219' => 'dzi', 'Duzib147G0278' => 'dzi', 'Duzib160G0480' => 'dzi', 'Duzib170G0661' => 'dzi', 'Duzib177G0591' => 'dzi', 'Duzib187G1353' => 'dzi', 'Duzib192G0858' => 'dzi', 'Duzib192G0883' => 'dzi', 'Duzib213G0506' => 'dzi', 'Duzib235G0289' => 'dzi', 'Duzib251G0422' => 'dzi', 'ECA232G3898' => 'eca', 'ECA233G5950' => 'eca', 'ECA234G1699' => 'eca', 'ECA234G2421' => 'eca', 'ECA236G0426' => 'eca', 'ECA236G4331' => 'eca', 'ECA248G2573' => 'eca', 'EL10Ac1g00077' => 'bvu', 'EL10Ac1g01746' => 'bvu', 'EL10Ac2g03464' => 'bvu', 'EL10Ac4g08176' => 'bvu', 'EL10Ac7g17521' => 'bvu', 'EL10Ac8g20386' => 'bvu', 'EL10Ac9g21343' => 'bvu', 'EL10Ac9g22688' => 'bvu', 'Eucgr.B03434' => 'egr', 'Eucgr.D00618' => 'egr', 'Eucgr.E02395' => 'egr', 'Eucgr.F01129' => 'egr', 'Eucgr.F02622' => 'egr', 'Eucgr.F04207' => 'egr', 'FAN01G0570' => 'fan', 'FAN03G3351' => 'fan', 'FAN06G3702' => 'fan', 'FAN07G2149' => 'fan', 'FAN10G3758' => 'fan', 'FAN11G1170' => 'fan', 'FAN11G2050' => 'fan', 'FAN11G2724' => 'fan', 'FAN12G1700' => 'fan', 'FAN12G2028' => 'fan', 'FAN15G1160' => 'fan', 'FAN15G3063' => 'fan', 'FAN16G2540' => 'fan', 'FAN16G3077' => 'fan', 'FAN16G3624' => 'fan', 'FAN17G0221' => 'fan', 'FAN20G2492' => 'fan', 'FAN20G2905' => 'fan', 'FAN21G0548' => 'fan', 'FAN21G1300' => 'fan', 'FAN22G0077' => 'fan', 'FAN22G1315' => 'fan', 'FAN24G1280' => 'fan', 'FAN24G1445' => 'fan', 'FAN24G3527' => 'fan', 'FAN25G0464' => 'fan', 'FAN25G2885' => 'fan', 'FAN25G3270' => 'fan', 'FAN27G1101' => 'fan', 'FAN27G2846' => 'fan', 'FAN27G3524' => 'fan', 'FvH4_2g11770' => 'fve', 'FvH4_2g15630' => 'fve', 'FvH4_3g05570' => 'fve', 'FvH4_3g09110' => 'fve', 'FvH4_3g19940' => 'fve', 'FvH4_4g04821' => 'fve', 'FvH4_4g31480' => 'fve', 'FvH4_7g01740' => 'fve', 'Glyma.05G130400' => 'gma', 'Glyma.05G156400' => 'gma', 'Glyma.07G197000' => 'gma', 'Glyma.08G085151' => 'gma', 'Glyma.08G114500' => 'gma', 'Glyma.08G300400' => 'gma', 'Glyma.10G215800' => 'gma', 'Glyma.12G224400' => 'gma', 'Glyma.13G179300' => 'gma', 'Glyma.13G218151' => 'gma', 'Glyma.13G238800' => 'gma', 'Glyma.13G276900' => 'gma', 'Glyma.14G078200' => 'gma', 'Glyma.15G074500' => 'gma', 'Glyma.15G094100' => 'gma', 'Glyma.17G247200' => 'gma', 'Glyma.18G120100' => 'gma', 'Glyma.20G176000' => 'gma', 'Gohir.A01G063600' => 'ghi', 'Gohir.A01G170301' => 'ghi', 'Gohir.A02G060500' => 'ghi', 'Gohir.A05G133850' => 'ghi', 'Gohir.A05G161400' => 'ghi', 'Gohir.A06G012900' => 'ghi', 'Gohir.A06G035901' => 'ghi', 'Gohir.A06G127100' => 'ghi', 'Gohir.A06G210500' => 'ghi', 'Gohir.A08G008650' => 'ghi', 'Gohir.A09G072700' => 'ghi', 'Gohir.A09G088301' => 'ghi', 'Gohir.A10G040600' => 'ghi', 'Gohir.A12G036300' => 'ghi', 'Gohir.A12G143350' => 'ghi', 'Gohir.A12G165500' => 'ghi', 'Gohir.A13G145700' => 'ghi', 'Gohir.D01G050000' => 'ghi', 'Gohir.D01G051366' => 'ghi', 'Gohir.D01G161350' => 'ghi', 'Gohir.D02G065900' => 'ghi', 'Gohir.D05G164200' => 'ghi', 'Gohir.D05G355500' => 'ghi', 'Gohir.D06G010400' => 'ghi', 'Gohir.D06G111250' => 'ghi', 'Gohir.D06G132000' => 'ghi', 'Gohir.D06G210500' => 'ghi', 'Gohir.D07G165675' => 'ghi', 'Gohir.D08G062240' => 'ghi', 'Gohir.D08G086101' => 'ghi', 'Gohir.D08G138060' => 'ghi', 'Gohir.D09G072300' => 'ghi', 'Gohir.D10G041400' => 'ghi', 'Gohir.D11G191020' => 'ghi', 'Gohir.D11G212066' => 'ghi', 'Gohir.D12G036300' => 'ghi', 'Gohir.D12G168600' => 'ghi', 'Gohir.D13G150600' => 'ghi', 'Gorai.001G057300' => 'gra', 'Gorai.002G069900' => 'gra', 'Gorai.002G200000' => 'gra', 'Gorai.003G067600' => 'gra', 'Gorai.005G074800' => 'gra', 'Gorai.006G087300' => 'gra', 'Gorai.008G037500' => 'gra', 'Gorai.008G181400' => 'gra', 'Gorai.009G169400' => 'gra', 'Gorai.009G387900' => 'gra', 'Gorai.010G013300' => 'gra', 'Gorai.010G153800' => 'gra', 'Gorai.010G255800' => 'gra', 'Gorai.011G043700' => 'gra', 'Gorai.011G198900' => 'gra', 'Gorai.013G168400' => 'gra', 'GSVIVG01005212001' => 'vvi', 'GSVIVG01006163001' => 'vvi', 'GSVIVG01009625001' => 'vvi', 'GSVIVG01014338001' => 'vvi', 'GSVIVG01020005001' => 'vvi', 'GSVIVG01021450001' => 'vvi', 'GSVIVG01023975001' => 'vvi', 'GSVIVG01034490001' => 'vvi', 'HanXRQChr04g0112071' => 'han', 'HanXRQChr05g0131151' => 'han', 'HanXRQChr09g0262371' => 'han', 'HanXRQChr09g0268401' => 'han', 'HanXRQChr10g0279241' => 'han', 'HanXRQChr10g0297961' => 'han', 'HanXRQChr11g0326231' => 'han', 'HanXRQChr11g0328471' => 'han', 'HanXRQChr16g0507941' => 'han', 'HanXRQChr17g0560211' => 'han', 'Haze_02108' => 'cav', 'Haze_02428' => 'cav', 'Haze_05593' => 'cav', 'Haze_06448' => 'cav', 'Haze_09427' => 'cav', 'Haze_12022' => 'cav', 'Haze_17612' => 'cav', 'Haze_17928' => 'cav', 'Hma1.2p1_0032F.1_g019250' => 'hma', 'Hma1.2p1_0163F.1_g072690' => 'hma', 'Hma1.2p1_0265F.1_g106710' => 'hma', 'Hma1.2p1_0286F.1_g113970' => 'hma', 'Hma1.2p1_0363F.1_g136640' => 'hma', 'Hma1.2p1_0584F.1_g183470' => 'hma', 'Hma1.2p1_0885F.1_g232570' => 'hma', 'HPP92_006022' => 'vpl', 'HPP92_007320' => 'vpl', 'HPP92_011521' => 'vpl', 'HPP92_019387' => 'vpl', 'HPP92_024038' => 'vpl', 'Hund05891' => 'sun', 'Hund06450' => 'sun', 'Hund12053' => 'sun', 'Hund16800' => 'sun', 'Hund21222' => 'sun', 'Hund22896' => 'sun', 'Hund23746' => 'sun', 'Hund27083' => 'sun', 'Lalb_Chr02g0141831' => 'lal', 'Lalb_Chr02g0141841' => 'lal', 'Lalb_Chr05g0220411' => 'lal', 'Lalb_Chr06g0162081' => 'lal', 'Lalb_Chr09g0327651' => 'lal', 'Lalb_Chr13g0295051' => 'lal', 'Lalb_Chr15g0086801' => 'lal', 'Lalb_Chr16g0383781' => 'lal', 'Lalb_Chr16g0383791' => 'lal', 'Lalb_Chr18g0055441' => 'lal', 'Lalb_Chr18g0059611' => 'lal', 'Lalb_Chr20g0109661' => 'lal', 'Lalb_Chr20g0109831' => 'lal', 'Lalb_Chr20g0121871' => 'lal', 'Lalb_Chr22g0355361' => 'lal', 'Lalb_Chr25g0286371' => 'lal', 'Lj1A1187G43' => 'lonja', 'Lj1A1205T50' => 'lonja', 'Lj1A800G33' => 'lonja', 'Lj1C1187T7' => 'lonja', 'Lj1C843T11' => 'lonja', 'Lj1g0010940' => 'lja', 'Lj2A288T69' => 'lonja', 'Lj3g0024276' => 'lja', 'Lj4A47T76' => 'lonja', 'Lj4g0005805' => 'lja', 'Lj4g0006097' => 'lja', 'Lj4g0008528' => 'lja', 'Lj4g0024907' => 'lja', 'Lj5g0012472' => 'lja', 'Lj5g0018648' => 'lja', 'Lj6C789G1' => 'lonja', 'Lj6g0004000' => 'lja', 'Lj7A292G67' => 'lonja', 'Lj7A292T64' => 'lonja', 'Lj9A400T58' => 'lonja', 'Lsat_1_v5_gn_1_126181' => 'lsa', 'Lsat_1_v5_gn_4_123041' => 'lsa', 'Lsat_1_v5_gn_4_133620' => 'lsa', 'Lsat_1_v5_gn_4_53221' => 'lsa', 'Lsat_1_v5_gn_4_71961' => 'lsa', 'Lsat_1_v5_gn_7_105241' => 'lsa', 'Lsat_1_v5_gn_7_21361' => 'lsa', 'Lsat_1_v5_gn_7_28860' => 'lsa', 'Lsat_1_v5_gn_7_31260' => 'lsa', 'Lsat_1_v5_gn_8_52801' => 'lsa', 'Manes.02G191400' => 'mes', 'Manes.03G110100' => 'mes', 'Manes.04G071100' => 'mes', 'Manes.05G100500' => 'mes', 'Manes.05G164700' => 'mes', 'Manes.15G087000' => 'mes', 'Manes.15G121500' => 'mes', 'Manes.16G028300' => 'mes', 'Manes.17G046100' => 'mes', 'Manes.17G069800' => 'mes', 'Manes.18G100500' => 'mes', 'Mapoly0002s0109' => 'mpo', 'Mapoly0024s0007' => 'mpo', 'Mapoly0089s0032' => 'mpo', 'MBI04_g42241_MAGBIO' => 'mbi', 'MBI05_g11988_MAGBIO' => 'mbi', 'MBI05_g35452_MAGBIO' => 'mbi', 'MBI07_g30179_MAGBIO' => 'mbi', 'MBI07_g35859_MAGBIO' => 'mbi', 'MBI07_g35860_MAGBIO' => 'mbi', 'MBI07_g37166_MAGBIO' => 'mbi', 'MBI08_g18172_MAGBIO' => 'mbi', 'MBI09_g08441_MAGBIO' => 'mbi', 'MBI13_g01676_MAGBIO' => 'mbi', 'MBI14_g42955_MAGBIO' => 'mbi', 'MBI16_g13161_MAGBIO' => 'mbi', 'MBI17_g27204_MAGBIO' => 'mbi', 'MBI19_g21595_MAGBIO' => 'mbi', 'MD00G1148400' => 'mdo', 'MD02G1301200' => 'mdo', 'MD03G1227800' => 'mdo', 'MD05G1041100' => 'mdo', 'MD05G1124800' => 'mdo', 'MD05G1284000' => 'mdo', 'MD05G1338800' => 'mdo', 'MD05G1338900' => 'mdo', 'MD07G1022800' => 'mdo', 'MD10G1047500' => 'mdo', 'MD10G1127500' => 'mdo', 'MD10G1262300' => 'mdo', 'MD10G1293800' => 'mdo', 'MD16G1074300' => 'mdo', 'Medtr1g021670' => 'mtr', 'Medtr1g096320' => 'mtr', 'Medtr2g013690' => 'mtr', 'Medtr2g019450' => 'mtr', 'Medtr2g085170' => 'mtr', 'Medtr4g088785' => 'mtr', 'Medtr8g055930' => 'mtr', 'Medtr8g085850' => 'mtr', 'MELO3C002605.2' => 'cme', 'MELO3C003891.2' => 'cme', 'MELO3C004012.2' => 'cme', 'MELO3C007134.2' => 'cme', 'MELO3C008118.2' => 'cme', 'MELO3C016700.2' => 'cme', 'MELO3C024127.2' => 'cme', 'MELO3C033361.2' => 'cme', 'MELO3C033362.2' => 'cme', 'Migut.C00430' => 'egut', 'Migut.C01246' => 'egut', 'Migut.E00101' => 'egut', 'Migut.H01486' => 'egut', 'Migut.H01939' => 'egut', 'Migut.K00360' => 'egut', 'Migut.M00910' => 'egut', 'Migut.M01139' => 'egut', 'Migut.N02677' => 'egut', 'MSTRG.13252' => 'ama', 'MSTRG.14701' => 'ama', 'MSTRG.1521' => 'ama', 'MSTRG.15884' => 'ama', 'MSTRG.16242' => 'ama', 'MSTRG.22285' => 'ama', 'MSTRG.22444' => 'ama', 'MSTRG.2349' => 'ama', 'MSTRG.26308' => 'ama', 'MSTRG.28296' => 'ama', 'MSTRG.9895' => 'ama', 'Nitab4.5_0000110g0060' => 'nta', 'Nitab4.5_0000420g0130' => 'nta', 'Nitab4.5_0000422g0030' => 'nta', 'Nitab4.5_0000560g0180' => 'nta', 'Nitab4.5_0000703g0100' => 'nta', 'Nitab4.5_0000786g0200' => 'nta', 'Nitab4.5_0001336g0020' => 'nta', 'Nitab4.5_0001796g0030' => 'nta', 'Nitab4.5_0003348g0060' => 'nta', 'Nitab4.5_0003698g0040' => 'nta', 'Nitab4.5_0003942g0090' => 'nta', 'Nitab4.5_0004775g0070' => 'nta', 'Nitab4.5_0004864g0030' => 'nta', 'Nitab4.5_0005615g0020' => 'nta', 'Nitab4.5_0009288g0030' => 'nta', 'Nitab4.5_0009341g0010' => 'nta', 'Nitab4.5_0009535g0010' => 'nta', 'Nn1g03995' => 'nnu', 'Nn1g04100' => 'nnu', 'Nn1g06530' => 'nnu', 'Nn3g16404' => 'nnu', 'Nn3g17212' => 'nnu', 'Nn3g20776' => 'nnu', 'Nn3g21923' => 'nnu', 'Nn5g27737' => 'nnu', 'Nn5g29461' => 'nnu', 'Nn7g38355' => 'nnu', 'Nn8g39873' => 'nnu', 'Oeu000548.2' => 'oeu', 'Oeu004672.1' => 'oeu', 'Oeu015605.2' => 'oeu', 'Oeu016092.1' => 'oeu', 'Oeu017879.3' => 'oeu', 'Oeu024910.1' => 'oeu', 'Oeu028965.1' => 'oeu', 'Oeu031269.1' => 'oeu', 'Oeu031270.1' => 'oeu', 'Oeu032535.1' => 'oeu', 'Oeu034151.1' => 'oeu', 'Oeu034152.1' => 'oeu', 'Oeu034588.2' => 'oeu', 'Oeu050846.1' => 'oeu', 'Oeu050849.2' => 'oeu', 'Oeu051063.2' => 'oeu', 'Oeu052368.1' => 'oeu', 'Oeu052370.1' => 'oeu', 'Os01g0210400' => 'osa', 'Os01g0304300' => 'osa', 'Os01g0749100' => 'osa', 'Os02g0745800' => 'osa', 'Os03g0769050' => 'osa', 'Os05g0531500' => 'osa', 'Os06g0724300' => 'osa', 'Os11g0198100' => 'osa', 'Peaxi162Scf00069g01425' => 'pax', 'Peaxi162Scf00280g00811' => 'pax', 'Peaxi162Scf00310g00615' => 'pax', 'Peaxi162Scf00362g00542' => 'pax', 'Peaxi162Scf00461g00310' => 'pax', 'Peaxi162Scf00530g00118' => 'pax', 'Peaxi162Scf00541g00057' => 'pax', 'Peaxi162Scf00661g00017' => 'pax', 'Peaxi162Scf00926g00027' => 'pax', 'Peaxi162Scf01064g00263' => 'pax', 'Peaxi162Scf01211g00135' => 'pax', 'PGR004G2336' => 'pgr', 'PGR042G0327' => 'pgr', 'PGR042G1957' => 'pgr', 'PGR042G2003' => 'pgr', 'PGR042G3929' => 'pgr', 'PGR083G1137' => 'pgr', 'PGR083G1364' => 'pgr', 'PGSC0003DMG400003381' => 'stu', 'PGSC0003DMG400003417' => 'stu', 'PGSC0003DMG400008981' => 'stu', 'PGSC0003DMG400012417' => 'stu', 'PGSC0003DMG400012823' => 'stu', 'PGSC0003DMG400016885' => 'stu', 'PGSC0003DMG400022812' => 'stu', 'PGSC0003DMG400029726' => 'stu', 'PGSC0003DMG401009243' => 'stu', 'PGSC0003DMG401031505' => 'stu', 'PGSC0003DMG402031505' => 'stu', 'Phvul.001G017600' => 'pvu', 'Phvul.002G193500' => 'pvu', 'Phvul.002G228900' => 'pvu', 'Phvul.002G236800' => 'pvu', 'Phvul.003G049500' => 'pvu', 'Phvul.005G072000' => 'pvu', 'Phvul.006G164800' => 'pvu', 'Phvul.006G185100' => 'pvu', 'Phvul.007G090000' => 'pvu', 'Potri.001G399800' => 'ptr', 'Potri.002G149900' => 'ptr', 'Potri.004G044100' => 'ptr', 'Potri.004G177600' => 'ptr', 'Potri.009G138000' => 'ptr', 'Potri.010G094000' => 'ptr', 'Potri.011G053000' => 'ptr', 'Potri.011G119300' => 'ptr', 'Potri.013G113700' => 'ptr', 'Potri.018G107800' => 'ptr', 'Potri.019G084100' => 'ptr', 'Pp3c14_23720' => 'ppa', 'Pp3c16_6340' => 'ppa', 'Pp3c23_13420' => 'ppa', 'Pp3c24_2740' => 'ppa', 'Pp3c25_860' => 'ppa', 'Pp3c8_21750' => 'ppa', 'Prupe.1G273000' => 'ppe', 'Prupe.1G273700' => 'ppe', 'Prupe.1G274100' => 'ppe', 'Prupe.2G023300' => 'ppe', 'Prupe.4G048000' => 'ppe', 'Prupe.4G080400' => 'ppe', 'Prupe.4G181200' => 'ppe', 'Prupe.8G056900' => 'ppe', 'Prupe.8G168700' => 'ppe', 'Psat1g189080' => 'psa', 'Psat1g204760' => 'psa', 'Psat4g175560' => 'psa', 'Psat4g177720' => 'psa', 'Psat5g244240' => 'psa', 'Psat6g010720' => 'psa', 'Psat6g187200' => 'psa', 'Psat7g072040' => 'psa', 'PSO017G3501' => 'pso', 'PSO063G2148' => 'pso', 'PSO063G5608' => 'pso', 'PSO210G6392' => 'pso', 'PSO541G2319' => 'pso', 'PSO541G2836' => 'pso', 'PSO541G4012' => 'pso', 'PSO541G6253' => 'pso', 'PSO675G0580' => 'pso', 'PSO675G0856' => 'pso', 'PSO675G5635' => 'pso', 'PSO675G9157' => 'pso', 'PSO832G1660' => 'pso', 'PSO832G1969' => 'pso', 'QL02p007186' => 'qlo', 'QL02p033904' => 'qlo', 'QL03p064391' => 'qlo', 'QL05p040593' => 'qlo', 'QL05p058242' => 'qlo', 'QL08p021825' => 'qlo', 'QL11p004981' => 'qlo', 'RcHm_v2.0_Chr1g0318301' => 'rch', 'RcHm_v2.0_Chr4g0418501' => 'rch', 'RcHm_v2.0_Chr4g0439971' => 'rch', 'RcHm_v2.0_Chr5g0008541' => 'rch', 'RcHm_v2.0_Chr5g0014101' => 'rch', 'RcHm_v2.0_Chr5g0014131' => 'rch', 'RcHm_v2.0_Chr5g0033621' => 'rch', 'RcHm_v2.0_Chr6g0272041' => 'rch', 'RcHm_v2.0_Chr6g0278831' => 'rch', 'Rhsim02G0130400' => 'rsi', 'Rhsim02G0171100' => 'rsi', 'Rhsim05G0053000' => 'rsi', 'Rhsim05G0053100' => 'rsi', 'Rhsim06G0096500' => 'rsi', 'Rhsim06G0096600' => 'rsi', 'Rhsim06G0199100' => 'rsi', 'Rhsim12G0062300' => 'rsi', 'Rhsim12G0062800' => 'rsi', 'Sabra02G0118600' => 'sbr', 'Sabra04G0027300' => 'sbr', 'Sabra04G0119500' => 'sbr', 'Sabra08G0112500' => 'sbr', 'Sabra11G0036800' => 'sbr', 'Sabra11G0103800' => 'sbr', 'Sabra13G0096300' => 'sbr', 'Sabra16G0262300' => 'sbr', 'Sabra18G0091700' => 'sbr', 'Sabra19G0095400' => 'sbr', 'SalBow6G3080' => 'sbo', 'SalBow7G1157' => 'sbo', 'SalBow7G2123' => 'sbo', 'SalBow7G2285' => 'sbo', 'SalBow7G3537' => 'sbo', 'SalBow8G2947' => 'sbo', 'SalBow8G4463' => 'sbo', 'SalBow8G5466' => 'sbo', 'Sc01g0001750' => 'sci', 'Sc02g0006640' => 'sci', 'Sc02g0006670' => 'sci', 'Sc04g0008220' => 'sci', 'Sc05g0006190' => 'sci', 'Sc08g0002760' => 'sci', 'Sc17g0006170' => 'sci', 'Sc22g0002050' => 'sci', 'Sc23g0001190' => 'sci', 'Sc24g0000980' => 'sci', 'Sed0006245' => 'sed', 'Sed0007543' => 'sed', 'Sed0009411' => 'sed', 'Sed0010765' => 'sed', 'Sed0012944' => 'sed', 'Sed0014682' => 'sed', 'Sed0016174' => 'sed', 'Sed0016796' => 'sed', 'Sed0020317' => 'sed', 'Sed0021467' => 'sed', 'SEGI_01316' => 'sgi', 'SEGI_03374' => 'sgi', 'SEGI_16265' => 'sgi', 'SEGI_18569' => 'sgi', 'SEGI_20351' => 'sgi', 'SEGI_26395' => 'sgi', 'SEGI_29469' => 'sgi', 'SEGI_34771' => 'sgi', 'SEGI_36769' => 'sgi', 'SEGI_37139' => 'sgi', 'SGA_v2.0_scaffold100G29687' => 'sas', 'SGA_v2.0_scaffold118G32472' => 'sas', 'SGA_v2.0_scaffold14G07051' => 'sas', 'SGA_v2.0_scaffold183G39845' => 'sas', 'SGA_v2.0_scaffold1G00174' => 'sas', 'SGA_v2.0_scaffold22G09714' => 'sas', 'SGA_v2.0_scaffold333G48992' => 'sas', 'SGA_v2.0_scaffold46G17491' => 'sas', 'SGA_v2.0_scaffold49G18294' => 'sas', 'SGA_v2.0_scaffold63G21658' => 'sas', 'SHI01741' => 'shi', 'SHI05771' => 'shi', 'SHI18077' => 'shi', 'SHI20525' => 'shi', 'SHI20527' => 'shi', 'SHI20528' => 'shi', 'SMO172G0185' => 'smo', 'SMO198G0020' => 'smo', 'SMO351G0006' => 'smo', 'SMO356G0118' => 'smo', 'SMO358G0296' => 'smo', 'SMO367G0079' => 'smo', 'SMO367G1277' => 'smo', 'Solyc01g014220.3' => 'sly', 'Solyc01g111770.2' => 'sly', 'Solyc02g078180.3' => 'sly', 'Solyc03g006430.3' => 'sly', 'Solyc03g006456.1' => 'sly', 'Solyc03g079860.2' => 'sly', 'Solyc04g079770.3' => 'sly', 'Solyc05g007430.4' => 'sly', 'Solyc07g063150.3' => 'sly', 'Solyc08g016620.3' => 'sly', 'Solyc09g057590.3' => 'sly', 'Solyc09g057600.1' => 'sly', 'Solyc10g009050.3' => 'sly', 'Solyc11g017420.2' => 'sly', 'Sopen01g053810' => 'spe', 'Sopen02g023040' => 'spe', 'Sopen03g002440' => 'spe', 'Sopen04g033350' => 'spe', 'Sopen05g003310' => 'spe', 'Sopen07g004050' => 'spe', 'Sopen07g031340' => 'spe', 'Sopen08g006990' => 'spe', 'Sopen10g004830' => 'spe', 'Sopen11g009370' => 'spe', 'Sp1g24450' => 'spa', 'Sp1g29670' => 'spa', 'Sp1g39600' => 'spa', 'Sp2g11080' => 'spa', 'Sp2g13970' => 'spa', 'Sp4g16130' => 'spa', 'Sp6g13080' => 'spa', 'Sp7g37270' => 'spa', 'TAR371G0065' => 'tar', 'TAR376G0340' => 'tar', 'TAR376G0435' => 'tar', 'TAR381G0002' => 'tar', 'TAR381G1236' => 'tar', 'TAR624G0055' => 'tar', 'TAR624G0324' => 'tar', 'TAR624G0696' => 'tar', 'TAR624G0906' => 'tar', 'TAR625G0107' => 'tar', 'TAR626G0015' => 'tar', 'TAR626G1356' => 'tar', 'TAR627G0888' => 'tar', 'TAR628G0399' => 'tar', 'TAR628G1327' => 'tar', 'TAR629G2831' => 'tar', 'TAR629G2874' => 'tar', 'TAR633G1432' => 'tar', 'TAR633G2771' => 'tar', 'THA.LOC104803394' => 'tha', 'THA.LOC104805153' => 'tha', 'THA.LOC104806784' => 'tha', 'THA.LOC104810473' => 'tha', 'THA.LOC104813100' => 'tha', 'THA.LOC104814215' => 'tha', 'THA.LOC104815554' => 'tha', 'THA.LOC104820544' => 'tha', 'THA.LOC104824754' => 'tha', 'THA.LOC104827717' => 'tha', 'Thecc.02G031400' => 'tca', 'Thecc.02G055900' => 'tca', 'Thecc.02G350800' => 'tca', 'Thecc.06G150900' => 'tca', 'Thecc.06G186600' => 'tca', 'Thecc.07G089600' => 'tca', 'Thecc.08G020400' => 'tca', 'Thecc.08G182100' => 'tca', 'Thhalv10000873m.g' => 'esa', 'Thhalv10004185m.g' => 'esa', 'Thhalv10006981m.g' => 'esa', 'Thhalv10007204m.g' => 'esa', 'Thhalv10011374m.g' => 'esa', 'Thhalv10013482m.g' => 'esa', 'Thhalv10017801m.g' => 'esa', 'Thhalv10024983m.g' => 'esa', 'TPR.G12072' => 'tpr', 'TPR.G15769' => 'tpr', 'TPR.G16504' => 'tpr', 'TPR.G16506' => 'tpr', 'TPR.G24345' => 'tpr', 'TPR.G26666' => 'tpr', 'TPR.G27320' => 'tpr', 'TPR.G31819' => 'tpr', 'TPR.G38879' => 'tpr', 'TPR.G39015' => 'tpr', 'TPR.G8819' => 'tpr', 'TWI09G0924' => 'twi', 'TWI12G0811' => 'twi', 'TWI12G1294' => 'twi', 'TWI31G0150' => 'twi', 'TWI36G1262' => 'twi', 'TWI38G1287' => 'twi', 'TWI38G1633' => 'twi', 'TWI38G1982' => 'twi', 'TWI39G0116' => 'twi', 'TWI60G1011' => 'twi', 'TWI63G0171' => 'twi', 'TWI73G0839' => 'twi', 'TWI79G1511' => 'twi', 'unitig_0.g915' => 'ugi', 'unitig_0.g916' => 'ugi', 'unitig_21.g20219' => 'ugi', 'unitig_21.g20416' => 'ugi', 'unitig_578.g16132' => 'ugi', 'unitig_578.g16718' => 'ugi', 'unitig_62.g23481' => 'ugi', 'unitig_744.g24535' => 'ugi', 'unitig_749.g13525' => 'ugi', 'vmacro01248' => 'vma', 'vmacro02290' => 'vma', 'vmacro10946' => 'vma', 'vmacro11865' => 'vma', 'vmacro12493' => 'vma', 'vmacro17322' => 'vma', 'vmacro21599' => 'vma', 'vmacro23041' => 'vma', 'VMungo0251G0004' => 'vmu', 'VMungo0251G2639' => 'vmu', 'VMungo0251G2967' => 'vmu', 'VMungo0540G0864' => 'vmu', 'VMungo0540G1569' => 'vmu', 'VMungo0647G0317' => 'vmu', 'VMungo0720G1373' => 'vmu', 'VMungo0720G1508' => 'vmu', 'VMungo1080G0485' => 'vmu', 'VMungo1215G3177' => 'vmu', 'Zm00001eb112600' => 'zma', 'Zm00001eb120220' => 'zma', 'Zm00001eb153240' => 'zma', 'Zm00001eb168880' => 'zma', 'Zm00001eb213920' => 'zma', 'Zm00001eb228280' => 'zma', 'Zm00001eb254580' => 'zma', 'Zm00001eb272180' => 'zma', 'Zm00001eb293190' => 'zma', 'Zm00001eb322930' => 'zma', 'Zm00001eb353360' => 'zma', 'Zm00001eb353390' => 'zma', 'Zm00001eb353430' => 'zma', 'Zm00001eb353440' => 'zma', 'Zm00001eb353780' => 'zma' ) $gf_id = 'HOM05D000499' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000499' ) $data_identifier = 'HOM05D000499' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 29, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 12, 'amhyb' => (int) 8, 'aly' => (int) 12, 'aox' => (int) 9, 'arhy' => (int) 26, 'ath' => (int) 8, 'atr' => (int) 7, 'acertr' => (int) 10, 'cqu' => (int) 15, 'bca' => (int) 29, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 11, 'cansat' => (int) 8, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 9, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 8, 'cpa' => (int) 10, 'csa' => (int) 7, 'camsi' => (int) 20, 'dca' => (int) 8, 'din' => (int) 12, 'dzi' => (int) 14, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 6, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 38, 'gra' => (int) 16, 'vvi' => (int) 8, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 5, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 11, 'lja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 11, 'mpo' => (int) 3, 'mbi' => (int) 14, 'mdo' => (int) 14, 'mtr' => (int) 8, 'cme' => (int) 9, 'egut' => (int) 9, 'ama' => (int) 11, 'nta' => (int) 17, 'nnu' => (int) 11, 'oeu' => (int) 18, 'osa' => (int) 8, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 6, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 9, 'rsi' => (int) 9, 'sbr' => (int) 10, 'sbo' => (int) 8, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 10, 'sas' => (int) 10, 'shi' => (int) 6, 'smo' => (int) 7, 'sly' => (int) 14, 'spe' => (int) 10, 'spa' => (int) 8, 'tar' => (int) 19, 'tha' => (int) 10, 'tca' => (int) 8, 'esa' => (int) 8, 'tpr' => (int) 11, 'twi' => (int) 13, 'ugi' => (int) 9, 'vma' => (int) 8, 'vmu' => (int) 10, 'zma' => (int) 15 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb353780' $species_info = array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ) $local_species = 'sas' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000499', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1066', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p29780' => 'bna', 'A02p33180' => 'bna', 'A03p16470' => 'bna', 'A03p66010' => 'bna', 'A04p25970' => 'bna', 'A06p01270' => 'bna', 'A06p46080' => 'bna', 'A07p11400' => 'bna', 'A08p01840' => 'bna', 'A08p08230' => 'bna', 'A08p25740' => 'bna', 'A09p32070' => 'bna', 'A09p37830' => 'bna', 'A09p42840' => 'bna', 'A09p42850' => 'bna', 'Aa31LG10G2060' => 'aar', 'Aa31LG2G7410' => 'aar', 'Aa31LG6G10200' => 'aar', 'Aa31LG6G16680' => 'aar', 'Aa31LG6G8470' => 'aar', 'Aa31LG9G12730' => 'aar', 'Aa31LG9G13680' => 'aar', 'Aa31LG9G14920' => 'aar', 'Aa31LG9G6650' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4977' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5467' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3254' => 'aag', 'Actinidia02578' => 'ach', 'Actinidia07693' => 'ach', 'Actinidia08413' => 'ach', 'Actinidia08414' => 'ach', 'Actinidia15289' => 'ach', 'Actinidia19871' => 'ach', 'Actinidia21475' => 'ach', 'Actinidia22576' => 'ach', 'Actinidia28327' => 'ach', 'Actinidia32491' => 'ach', 'Actinidia39463' => 'ach', 'Actinidia39571' => 'ach', 'Ah.01g013750' => 'amhyb', 'Ah.01g023210' => 'amhyb', 'Ah.04g164850' => 'amhyb', 'Ah.05g178060' => 'amhyb', 'Ah.07g204270' => 'amhyb', 'Ah.07g208480' => 'amhyb', 'Ah.09g237410' => 'amhyb', 'Ah.14g089460' => 'amhyb', 'AL1G41790' => 'aly', 'AL1G49050' => 'aly', 'AL1G53810' => 'aly', 'AL1G61400' => 'aly', 'AL4G18580' => 'aly', 'AL5G12510' => 'aly', 'AL5G12540' => 'aly', 'AL6G43230' => 'aly', 'AL7G10370' => 'aly', 'AL7G19250' => 'aly', 'AL8G12240' => 'aly', 'AL8G18540' => 'aly', 'Aqoxy1G02409' => 'aox', 'Aqoxy2G03993' => 'aox', 'Aqoxy3G03357' => 'aox', 'Aqoxy4G00785' => 'aox', 'Aqoxy5G02598' => 'aox', 'Aqoxy6G00132' => 'aox', 'Aqoxy7G01776' => 'aox', 'Aqoxy7G02316' => 'aox', 'Aqoxy7G03973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.12AFKW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B8730' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27IQR1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3F75VG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3RE0GA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41TCQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.527VTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FIR39' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5W8UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DA38EV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ63HS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H1I32C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HC27T5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4M8AP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7N3CZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9UVDZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LS1NQA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT1D4B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SKC4TM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCFV76' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF9Q1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQWD9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1ZM88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WE07RT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YCK7VH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJE6Q6' => 'arhy', 'AT1G28240' => 'ath', 'AT1G34550' => 'ath', 'AT1G53040' => 'ath', 'AT2G02910' => 'ath', 'AT4G09630' => 'ath', 'AT4G38500' => 'ath', 'AT5G42660' => 'ath', 'AT5G46220' => 'ath', 'ATR0152G026' => 'atr', 'ATR0564G343' => 'atr', 'ATR0706G151' => 'atr', 'ATR0733G207' => 'atr', 'ATR0751G234' => 'atr', 'ATR0807G048' => 'atr', 'ATR1091G084' => 'atr', 'Atru.chr10.1229' => 'acertr', 'Atru.chr10.1230' => 'acertr', 'Atru.chr10.1874' => 'acertr', 'Atru.chr11.1808' => 'acertr', 'Atru.chr13.1795' => 'acertr', 'Atru.chr13.570' => 'acertr', 'Atru.chr2.2608' => 'acertr', 'Atru.chr2.2609' => 'acertr', 'Atru.chr5.3428' => 'acertr', 'Atru.chr8.1171' => 'acertr', 'AUR62004651' => 'cqu', 'AUR62008675' => 'cqu', 'AUR62010014' => 'cqu', 'AUR62013004' => 'cqu', 'AUR62014825' => 'cqu', 'AUR62015015' => 'cqu', 'AUR62015151' => 'cqu', 'AUR62017020' => 'cqu', 'AUR62019422' => 'cqu', 'AUR62023570' => 'cqu', 'AUR62025571' => 'cqu', 'AUR62029098' => 'cqu', 'AUR62033863' => 'cqu', 'AUR62034296' => 'cqu', 'AUR62040075' => 'cqu', 'BcaB02g07334' => 'bca', 'BcaB02g10575' => 'bca', 'BcaB03g12119' => 'bca', 'BcaB03g12120' => 'bca', 'BcaB03g13945' => 'bca', 'BcaB04g17123' => 'bca', 'BcaB04g17867' => 'bca', 'BcaB04g19839' => 'bca', 'BcaB07g30317' => 'bca', 'BcaB07g32432' => 'bca', 'BcaB07g33362' => 'bca', 'BcaB08g36611' => 'bca', 'BcaC01g00028' => 'bca', 'BcaC01g01356' => 'bca', 'BcaC01g02034' => 'bca', 'BcaC01g06051' => 'bca', 'BcaC03g16839' => 'bca', 'BcaC03g17176' => 'bca', 'BcaC05g26829' => 'bca', 'BcaC06g31490' => 'bca', 'BcaC06g35344' => 'bca', 'BcaC06g36570' => 'bca', 'BcaC07g37537' => 'bca', 'BcaC08g43491' => 'bca', 'BcaC08g43773' => 'bca', 'BcaNung00234' => 'bca', 'BcaNung01982' => 'bca', 'BcaNung03707' => 'bca', 'BcaNung06454' => 'bca', 'BolC2t10762H' => 'bol', 'BolC2t11191H' => 'bol', 'BolC3t14322H' => 'bol', 'BolC3t19747H' => 'bol', 'BolC3t21425H' => 'bol', 'BolC4t27800H' => 'bol', 'BolC5t31423H' => 'bol', 'BolC6t35951H' => 'bol', 'BolC6t36282H' => 'bol', 'BolC7t40678H' => 'bol', 'BolC7t40679H' => 'bol', 'BolC7t42222H' => 'bol', 'BolC7t43492H' => 'bol', 'BolC7t46785H' => 'bol', 'BolC8t47853H' => 'bol', 'BolC9t56805H' => 'bol', 'BraA02t08000Z' => 'bra', 'BraA02t08341Z' => 'bra', 'BraA03t10936Z' => 'bra', 'BraA03t15657Z' => 'bra', 'BraA04t18100Z' => 'bra', 'BraA05t20523Z' => 'bra', 'BraA06t23353Z' => 'bra', 'BraA06t27473Z' => 'bra', 'BraA06t27769Z' => 'bra', 'BraA07t28928Z' => 'bra', 'BraA08t32236Z' => 'bra', 'BraA08t32841Z' => 'bra', 'BraA08t34524Z' => 'bra', 'BraA09t38742Z' => 'bra', 'BraA09t39295Z' => 'bra', 'C02p47180' => 'bna', 'C02p50990' => 'bna', 'C03p19360' => 'bna', 'C03p74950' => 'bna', 'C03p91000' => 'bna', 'C04p63260' => 'bna', 'C05p27050' => 'bna', 'C06p08750' => 'bna', 'C06p11490' => 'bna', 'C07p02820' => 'bna', 'C07p17180' => 'bna', 'C07p29440' => 'bna', 'C07p63730' => 'bna', 'C09p39260' => 'bna', 'CAN.G1164.34' => 'can', 'CAN.G1164.39' => 'can', 'CAN.G1530.3' => 'can', 'CAN.G162.61' => 'can', 'CAN.G176.6' => 'can', 'CAN.G289.49' => 'can', 'CAN.G370.21' => 'can', 'CAN.G370.22' => 'can', 'CAN.G371.117' => 'can', 'CAN.G58.37' => 'can', 'CAN.G588.98' => 'can', 'CANSAT21G2266' => 'cansat', 'CANSAT25G2799' => 'cansat', 'CANSAT35G0862' => 'cansat', 'CANSAT35G1704' => 'cansat', 'CANSAT35G1760' => 'cansat', 'CANSAT56G3971' => 'cansat', 'CANSAT56G4116' => 'cansat', 'CANSAT80G1259' => 'cansat', 'CARHR027730' => 'chi', 'CARHR033880' => 'chi', 'CARHR043270' => 'chi', 'CARHR145330' => 'chi', 'CARHR145340' => 'chi', 'CARHR175570' => 'chi', 'CARHR181570' => 'chi', 'CARHR258470' => 'chi', 'CARHR260490' => 'chi', 'CARHR294220' => 'chi', 'Carub.0001s2668' => 'cru', 'Carub.0001s3257' => 'cru', 'Carub.0001s4220' => 'cru', 'Carub.0005s0179' => 'cru', 'Carub.0006s2807' => 'cru', 'Carub.0007s0039' => 'cru', 'Carub.0008s0169' => 'cru', 'Carub.0008s0636' => 'cru', 'Ca_00338_v3' => 'car', 'Ca_00542_v3' => 'car', 'Ca_01844_v3' => 'car', 'Ca_10611_v3' => 'car', 'Ca_13326_v3' => 'car', 'Ca_17944_v3' => 'car', 'Ca_18546_v3' => 'car', 'Ca_24219_v3' => 'car', 'Ca_29972_v3' => 'car', 'CBR_g3681' => 'cbr', 'CBR_g40021' => 'cbr', 'Cc01_g08140' => 'ccan', 'Cc02_g13410' => 'ccan', 'Cc02_g37480' => 'ccan', 'Cc05_g12030' => 'ccan', 'Cc09_g03370' => 'ccan', 'Cc09_g10300' => 'ccan', 'Cc10_g03530' => 'ccan', 'Cc10_g11380' => 'ccan', 'CDE01G0176' => 'cde', 'CDE02G0675' => 'cde', 'CDE02G0942' => 'cde', 'CDE02G1153' => 'cde', 'CDE02G4177' => 'cde', 'CDE04G2117' => 'cde', 'CDE04G2736' => 'cde', 'CDE08G1161' => 'cde', 'CDE09G1238' => 'cde', 'Cfa000467' => 'cfa', 'Cfa000947' => 'cfa', 'Cfa004969' => 'cfa', 'Cfa005284' => 'cfa', 'Cfa008993' => 'cfa', 'Cfa018187' => 'cfa', 'Cfa018454' => 'cfa', 'Cfa020585' => 'cfa', 'Ciclev10000424m.g' => 'ccl', 'Ciclev10003605m.g' => 'ccl', 'Ciclev10007828m.g' => 'ccl', 'Ciclev10014620m.g' => 'ccl', 'Ciclev10015169m.g' => 'ccl', 'Ciclev10018291m.g' => 'ccl', 'Ciclev10028256m.g' => 'ccl', 'Ciclev10033822m.g' => 'ccl', 'CiPaw.05G060300' => 'cil', 'CiPaw.05G085000' => 'cil', 'CiPaw.06G083700' => 'cil', 'CiPaw.06G120300' => 'cil', 'CiPaw.09G060500' => 'cil', 'CiPaw.09G123800' => 'cil', 'CiPaw.11G169700' => 'cil', 'CiPaw.12G118300' => 'cil', 'CiPaw.15G071000' => 'cil', 'CiPaw.15G081900' => 'cil', 'ClCG01G024610' => 'cla', 'ClCG03G006070' => 'cla', 'ClCG05G019250' => 'cla', 'ClCG09G009500' => 'cla', 'ClCG11G008200' => 'cla', 'ClCG11G018080' => 'cla', 'COL.COLO4_17373' => 'col', 'COL.COLO4_22994' => 'col', 'COL.COLO4_26389' => 'col', 'COL.COLO4_27170' => 'col', 'COL.COLO4_31074' => 'col', 'COL.COLO4_31465' => 'col', 'COL.COLO4_36438' => 'col', 'COL.COLO4_36439' => 'col', 'Cpa.g.c38781' => 'cpa', 'Cpa.g.sc128.12' => 'cpa', 'Cpa.g.sc166.7' => 'cpa', 'Cpa.g.sc166.8' => 'cpa', 'Cpa.g.sc20.111' => 'cpa', 'Cpa.g.sc27.31' => 'cpa', 'Cpa.g.sc64.36' => 'cpa', 'Cpa.g.sc64.37' => 'cpa', 'Cpa.g.sc66.49' => 'cpa', 'Cpa.g.sc80.64' => 'cpa', 'CsaV3_1G012320' => 'csa', 'CsaV3_2G008480' => 'csa', 'CsaV3_2G033450' => 'csa', 'CsaV3_3G044830' => 'csa', 'CsaV3_4G033710' => 'csa', 'CsaV3_6G051730' => 'csa', 'CsaV3_7G025350' => 'csa', 'CSS0001067' => 'camsi', 'CSS0005996' => 'camsi', 'CSS0006590' => 'camsi', 'CSS0009673' => 'camsi', 'CSS0010201' => 'camsi', 'CSS0010549' => 'camsi', 'CSS0011364' => 'camsi', 'CSS0014473' => 'camsi', 'CSS0014961' => 'camsi', 'CSS0020191' => 'camsi', 'CSS0021165' => 'camsi', 'CSS0022306' => 'camsi', 'CSS0030591' => 'camsi', 'CSS0030696' => 'camsi', 'CSS0032653' => 'camsi', 'CSS0037487' => 'camsi', 'CSS0041102' => 'camsi', 'CSS0041261' => 'camsi', 'CSS0046246' => 'camsi', 'CSS0049256' => 'camsi', 'DCAR_004075' => 'dca', 'DCAR_011538' => 'dca', 'DCAR_019553' => 'dca', 'DCAR_020952' => 'dca', 'DCAR_021739' => 'dca', 'DCAR_027407' => 'dca', 'DCAR_027913' => 'dca', 'DCAR_028066' => 'dca', 'Dinv05899' => 'din', 'Dinv07563' => 'din', 'Dinv08010' => 'din', 'Dinv14125' => 'din', 'Dinv20172' => 'din', 'Dinv30743' => 'din', 'Dinv31229' => 'din', 'Dinv34162' => 'din', 'Dinv36028' => 'din', 'Dinv39368' => 'din', 'Dinv40565' => 'din', 'Dinv41706' => 'din', 'Duzib052G0089' => 'dzi', 'Duzib116G0641' => 'dzi', 'Duzib132G0069' => 'dzi', 'Duzib132G1219' => 'dzi', 'Duzib147G0278' => 'dzi', 'Duzib160G0480' => 'dzi', 'Duzib170G0661' => 'dzi', 'Duzib177G0591' => 'dzi', 'Duzib187G1353' => 'dzi', 'Duzib192G0858' => 'dzi', 'Duzib192G0883' => 'dzi', 'Duzib213G0506' => 'dzi', 'Duzib235G0289' => 'dzi', 'Duzib251G0422' => 'dzi', 'ECA232G3898' => 'eca', 'ECA233G5950' => 'eca', 'ECA234G1699' => 'eca', 'ECA234G2421' => 'eca', 'ECA236G0426' => 'eca', 'ECA236G4331' => 'eca', 'ECA248G2573' => 'eca', 'EL10Ac1g00077' => 'bvu', 'EL10Ac1g01746' => 'bvu', 'EL10Ac2g03464' => 'bvu', 'EL10Ac4g08176' => 'bvu', 'EL10Ac7g17521' => 'bvu', 'EL10Ac8g20386' => 'bvu', 'EL10Ac9g21343' => 'bvu', 'EL10Ac9g22688' => 'bvu', 'Eucgr.B03434' => 'egr', 'Eucgr.D00618' => 'egr', 'Eucgr.E02395' => 'egr', 'Eucgr.F01129' => 'egr', 'Eucgr.F02622' => 'egr', 'Eucgr.F04207' => 'egr', 'FAN01G0570' => 'fan', 'FAN03G3351' => 'fan', 'FAN06G3702' => 'fan', 'FAN07G2149' => 'fan', 'FAN10G3758' => 'fan', 'FAN11G1170' => 'fan', 'FAN11G2050' => 'fan', 'FAN11G2724' => 'fan', 'FAN12G1700' => 'fan', 'FAN12G2028' => 'fan', 'FAN15G1160' => 'fan', 'FAN15G3063' => 'fan', 'FAN16G2540' => 'fan', 'FAN16G3077' => 'fan', 'FAN16G3624' => 'fan', 'FAN17G0221' => 'fan', 'FAN20G2492' => 'fan', 'FAN20G2905' => 'fan', 'FAN21G0548' => 'fan', 'FAN21G1300' => 'fan', 'FAN22G0077' => 'fan', 'FAN22G1315' => 'fan', 'FAN24G1280' => 'fan', 'FAN24G1445' => 'fan', 'FAN24G3527' => 'fan', 'FAN25G0464' => 'fan', 'FAN25G2885' => 'fan', 'FAN25G3270' => 'fan', 'FAN27G1101' => 'fan', 'FAN27G2846' => 'fan', 'FAN27G3524' => 'fan', 'FvH4_2g11770' => 'fve', 'FvH4_2g15630' => 'fve', 'FvH4_3g05570' => 'fve', 'FvH4_3g09110' => 'fve', 'FvH4_3g19940' => 'fve', 'FvH4_4g04821' => 'fve', 'FvH4_4g31480' => 'fve', 'FvH4_7g01740' => 'fve', 'Glyma.05G130400' => 'gma', 'Glyma.05G156400' => 'gma', 'Glyma.07G197000' => 'gma', 'Glyma.08G085151' => 'gma', 'Glyma.08G114500' => 'gma', 'Glyma.08G300400' => 'gma', 'Glyma.10G215800' => 'gma', 'Glyma.12G224400' => 'gma', 'Glyma.13G179300' => 'gma', 'Glyma.13G218151' => 'gma', 'Glyma.13G238800' => 'gma', 'Glyma.13G276900' => 'gma', 'Glyma.14G078200' => 'gma', 'Glyma.15G074500' => 'gma', 'Glyma.15G094100' => 'gma', 'Glyma.17G247200' => 'gma', 'Glyma.18G120100' => 'gma', 'Glyma.20G176000' => 'gma', 'Gohir.A01G063600' => 'ghi', 'Gohir.A01G170301' => 'ghi', 'Gohir.A02G060500' => 'ghi', 'Gohir.A05G133850' => 'ghi', 'Gohir.A05G161400' => 'ghi', 'Gohir.A06G012900' => 'ghi', 'Gohir.A06G035901' => 'ghi', 'Gohir.A06G127100' => 'ghi', 'Gohir.A06G210500' => 'ghi', 'Gohir.A08G008650' => 'ghi', 'Gohir.A09G072700' => 'ghi', 'Gohir.A09G088301' => 'ghi', 'Gohir.A10G040600' => 'ghi', 'Gohir.A12G036300' => 'ghi', 'Gohir.A12G143350' => 'ghi', 'Gohir.A12G165500' => 'ghi', 'Gohir.A13G145700' => 'ghi', 'Gohir.D01G050000' => 'ghi', 'Gohir.D01G051366' => 'ghi', 'Gohir.D01G161350' => 'ghi', 'Gohir.D02G065900' => 'ghi', 'Gohir.D05G164200' => 'ghi', 'Gohir.D05G355500' => 'ghi', 'Gohir.D06G010400' => 'ghi', 'Gohir.D06G111250' => 'ghi', 'Gohir.D06G132000' => 'ghi', 'Gohir.D06G210500' => 'ghi', 'Gohir.D07G165675' => 'ghi', 'Gohir.D08G062240' => 'ghi', 'Gohir.D08G086101' => 'ghi', 'Gohir.D08G138060' => 'ghi', 'Gohir.D09G072300' => 'ghi', 'Gohir.D10G041400' => 'ghi', 'Gohir.D11G191020' => 'ghi', 'Gohir.D11G212066' => 'ghi', 'Gohir.D12G036300' => 'ghi', 'Gohir.D12G168600' => 'ghi', 'Gohir.D13G150600' => 'ghi', 'Gorai.001G057300' => 'gra', 'Gorai.002G069900' => 'gra', 'Gorai.002G200000' => 'gra', 'Gorai.003G067600' => 'gra', 'Gorai.005G074800' => 'gra', 'Gorai.006G087300' => 'gra', 'Gorai.008G037500' => 'gra', 'Gorai.008G181400' => 'gra', 'Gorai.009G169400' => 'gra', 'Gorai.009G387900' => 'gra', 'Gorai.010G013300' => 'gra', 'Gorai.010G153800' => 'gra', 'Gorai.010G255800' => 'gra', 'Gorai.011G043700' => 'gra', 'Gorai.011G198900' => 'gra', 'Gorai.013G168400' => 'gra', 'GSVIVG01005212001' => 'vvi', 'GSVIVG01006163001' => 'vvi', 'GSVIVG01009625001' => 'vvi', 'GSVIVG01014338001' => 'vvi', 'GSVIVG01020005001' => 'vvi', 'GSVIVG01021450001' => 'vvi', 'GSVIVG01023975001' => 'vvi', 'GSVIVG01034490001' => 'vvi', 'HanXRQChr04g0112071' => 'han', 'HanXRQChr05g0131151' => 'han', 'HanXRQChr09g0262371' => 'han', 'HanXRQChr09g0268401' => 'han', 'HanXRQChr10g0279241' => 'han', 'HanXRQChr10g0297961' => 'han', 'HanXRQChr11g0326231' => 'han', 'HanXRQChr11g0328471' => 'han', 'HanXRQChr16g0507941' => 'han', 'HanXRQChr17g0560211' => 'han', 'Haze_02108' => 'cav', 'Haze_02428' => 'cav', 'Haze_05593' => 'cav', 'Haze_06448' => 'cav', 'Haze_09427' => 'cav', 'Haze_12022' => 'cav', 'Haze_17612' => 'cav', 'Haze_17928' => 'cav', 'Hma1.2p1_0032F.1_g019250' => 'hma', 'Hma1.2p1_0163F.1_g072690' => 'hma', 'Hma1.2p1_0265F.1_g106710' => 'hma', 'Hma1.2p1_0286F.1_g113970' => 'hma', 'Hma1.2p1_0363F.1_g136640' => 'hma', 'Hma1.2p1_0584F.1_g183470' => 'hma', 'Hma1.2p1_0885F.1_g232570' => 'hma', 'HPP92_006022' => 'vpl', 'HPP92_007320' => 'vpl', 'HPP92_011521' => 'vpl', 'HPP92_019387' => 'vpl', 'HPP92_024038' => 'vpl', 'Hund05891' => 'sun', 'Hund06450' => 'sun', 'Hund12053' => 'sun', 'Hund16800' => 'sun', 'Hund21222' => 'sun', 'Hund22896' => 'sun', 'Hund23746' => 'sun', 'Hund27083' => 'sun', 'Lalb_Chr02g0141831' => 'lal', 'Lalb_Chr02g0141841' => 'lal', 'Lalb_Chr05g0220411' => 'lal', 'Lalb_Chr06g0162081' => 'lal', 'Lalb_Chr09g0327651' => 'lal', 'Lalb_Chr13g0295051' => 'lal', 'Lalb_Chr15g0086801' => 'lal', 'Lalb_Chr16g0383781' => 'lal', 'Lalb_Chr16g0383791' => 'lal', 'Lalb_Chr18g0055441' => 'lal', 'Lalb_Chr18g0059611' => 'lal', 'Lalb_Chr20g0109661' => 'lal', 'Lalb_Chr20g0109831' => 'lal', 'Lalb_Chr20g0121871' => 'lal', 'Lalb_Chr22g0355361' => 'lal', 'Lalb_Chr25g0286371' => 'lal', 'Lj1A1187G43' => 'lonja', 'Lj1A1205T50' => 'lonja', 'Lj1A800G33' => 'lonja', 'Lj1C1187T7' => 'lonja', 'Lj1C843T11' => 'lonja', 'Lj1g0010940' => 'lja', 'Lj2A288T69' => 'lonja', 'Lj3g0024276' => 'lja', 'Lj4A47T76' => 'lonja', 'Lj4g0005805' => 'lja', 'Lj4g0006097' => 'lja', 'Lj4g0008528' => 'lja', 'Lj4g0024907' => 'lja', 'Lj5g0012472' => 'lja', 'Lj5g0018648' => 'lja', 'Lj6C789G1' => 'lonja', 'Lj6g0004000' => 'lja', 'Lj7A292G67' => 'lonja', 'Lj7A292T64' => 'lonja', 'Lj9A400T58' => 'lonja', 'Lsat_1_v5_gn_1_126181' => 'lsa', 'Lsat_1_v5_gn_4_123041' => 'lsa', 'Lsat_1_v5_gn_4_133620' => 'lsa', 'Lsat_1_v5_gn_4_53221' => 'lsa', 'Lsat_1_v5_gn_4_71961' => 'lsa', 'Lsat_1_v5_gn_7_105241' => 'lsa', 'Lsat_1_v5_gn_7_21361' => 'lsa', 'Lsat_1_v5_gn_7_28860' => 'lsa', 'Lsat_1_v5_gn_7_31260' => 'lsa', 'Lsat_1_v5_gn_8_52801' => 'lsa', 'Manes.02G191400' => 'mes', 'Manes.03G110100' => 'mes', 'Manes.04G071100' => 'mes', 'Manes.05G100500' => 'mes', 'Manes.05G164700' => 'mes', 'Manes.15G087000' => 'mes', 'Manes.15G121500' => 'mes', 'Manes.16G028300' => 'mes', 'Manes.17G046100' => 'mes', 'Manes.17G069800' => 'mes', 'Manes.18G100500' => 'mes', 'Mapoly0002s0109' => 'mpo', 'Mapoly0024s0007' => 'mpo', 'Mapoly0089s0032' => 'mpo', 'MBI04_g42241_MAGBIO' => 'mbi', 'MBI05_g11988_MAGBIO' => 'mbi', 'MBI05_g35452_MAGBIO' => 'mbi', 'MBI07_g30179_MAGBIO' => 'mbi', 'MBI07_g35859_MAGBIO' => 'mbi', 'MBI07_g35860_MAGBIO' => 'mbi', 'MBI07_g37166_MAGBIO' => 'mbi', 'MBI08_g18172_MAGBIO' => 'mbi', 'MBI09_g08441_MAGBIO' => 'mbi', 'MBI13_g01676_MAGBIO' => 'mbi', 'MBI14_g42955_MAGBIO' => 'mbi', 'MBI16_g13161_MAGBIO' => 'mbi', 'MBI17_g27204_MAGBIO' => 'mbi', 'MBI19_g21595_MAGBIO' => 'mbi', 'MD00G1148400' => 'mdo', 'MD02G1301200' => 'mdo', 'MD03G1227800' => 'mdo', 'MD05G1041100' => 'mdo', 'MD05G1124800' => 'mdo', 'MD05G1284000' => 'mdo', 'MD05G1338800' => 'mdo', 'MD05G1338900' => 'mdo', 'MD07G1022800' => 'mdo', 'MD10G1047500' => 'mdo', 'MD10G1127500' => 'mdo', 'MD10G1262300' => 'mdo', 'MD10G1293800' => 'mdo', 'MD16G1074300' => 'mdo', 'Medtr1g021670' => 'mtr', 'Medtr1g096320' => 'mtr', 'Medtr2g013690' => 'mtr', 'Medtr2g019450' => 'mtr', 'Medtr2g085170' => 'mtr', 'Medtr4g088785' => 'mtr', 'Medtr8g055930' => 'mtr', 'Medtr8g085850' => 'mtr', 'MELO3C002605.2' => 'cme', 'MELO3C003891.2' => 'cme', 'MELO3C004012.2' => 'cme', 'MELO3C007134.2' => 'cme', 'MELO3C008118.2' => 'cme', 'MELO3C016700.2' => 'cme', 'MELO3C024127.2' => 'cme', 'MELO3C033361.2' => 'cme', 'MELO3C033362.2' => 'cme', 'Migut.C00430' => 'egut', 'Migut.C01246' => 'egut', 'Migut.E00101' => 'egut', 'Migut.H01486' => 'egut', 'Migut.H01939' => 'egut', 'Migut.K00360' => 'egut', 'Migut.M00910' => 'egut', 'Migut.M01139' => 'egut', 'Migut.N02677' => 'egut', 'MSTRG.13252' => 'ama', 'MSTRG.14701' => 'ama', 'MSTRG.1521' => 'ama', 'MSTRG.15884' => 'ama', 'MSTRG.16242' => 'ama', 'MSTRG.22285' => 'ama', 'MSTRG.22444' => 'ama', 'MSTRG.2349' => 'ama', 'MSTRG.26308' => 'ama', 'MSTRG.28296' => 'ama', 'MSTRG.9895' => 'ama', 'Nitab4.5_0000110g0060' => 'nta', 'Nitab4.5_0000420g0130' => 'nta', 'Nitab4.5_0000422g0030' => 'nta', 'Nitab4.5_0000560g0180' => 'nta', 'Nitab4.5_0000703g0100' => 'nta', 'Nitab4.5_0000786g0200' => 'nta', 'Nitab4.5_0001336g0020' => 'nta', 'Nitab4.5_0001796g0030' => 'nta', 'Nitab4.5_0003348g0060' => 'nta', 'Nitab4.5_0003698g0040' => 'nta', 'Nitab4.5_0003942g0090' => 'nta', 'Nitab4.5_0004775g0070' => 'nta', 'Nitab4.5_0004864g0030' => 'nta', 'Nitab4.5_0005615g0020' => 'nta', 'Nitab4.5_0009288g0030' => 'nta', 'Nitab4.5_0009341g0010' => 'nta', 'Nitab4.5_0009535g0010' => 'nta', 'Nn1g03995' => 'nnu', 'Nn1g04100' => 'nnu', 'Nn1g06530' => 'nnu', 'Nn3g16404' => 'nnu', 'Nn3g17212' => 'nnu', 'Nn3g20776' => 'nnu', 'Nn3g21923' => 'nnu', 'Nn5g27737' => 'nnu', 'Nn5g29461' => 'nnu', 'Nn7g38355' => 'nnu', 'Nn8g39873' => 'nnu', 'Oeu000548.2' => 'oeu', 'Oeu004672.1' => 'oeu', 'Oeu015605.2' => 'oeu', 'Oeu016092.1' => 'oeu', 'Oeu017879.3' => 'oeu', 'Oeu024910.1' => 'oeu', 'Oeu028965.1' => 'oeu', 'Oeu031269.1' => 'oeu', 'Oeu031270.1' => 'oeu', 'Oeu032535.1' => 'oeu', 'Oeu034151.1' => 'oeu', 'Oeu034152.1' => 'oeu', 'Oeu034588.2' => 'oeu', 'Oeu050846.1' => 'oeu', 'Oeu050849.2' => 'oeu', 'Oeu051063.2' => 'oeu', 'Oeu052368.1' => 'oeu', 'Oeu052370.1' => 'oeu', 'Os01g0210400' => 'osa', 'Os01g0304300' => 'osa', 'Os01g0749100' => 'osa', 'Os02g0745800' => 'osa', 'Os03g0769050' => 'osa', 'Os05g0531500' => 'osa', 'Os06g0724300' => 'osa', 'Os11g0198100' => 'osa', 'Peaxi162Scf00069g01425' => 'pax', 'Peaxi162Scf00280g00811' => 'pax', 'Peaxi162Scf00310g00615' => 'pax', 'Peaxi162Scf00362g00542' => 'pax', 'Peaxi162Scf00461g00310' => 'pax', 'Peaxi162Scf00530g00118' => 'pax', 'Peaxi162Scf00541g00057' => 'pax', 'Peaxi162Scf00661g00017' => 'pax', 'Peaxi162Scf00926g00027' => 'pax', 'Peaxi162Scf01064g00263' => 'pax', 'Peaxi162Scf01211g00135' => 'pax', 'PGR004G2336' => 'pgr', 'PGR042G0327' => 'pgr', 'PGR042G1957' => 'pgr', 'PGR042G2003' => 'pgr', 'PGR042G3929' => 'pgr', 'PGR083G1137' => 'pgr', 'PGR083G1364' => 'pgr', 'PGSC0003DMG400003381' => 'stu', 'PGSC0003DMG400003417' => 'stu', 'PGSC0003DMG400008981' => 'stu', 'PGSC0003DMG400012417' => 'stu', 'PGSC0003DMG400012823' => 'stu', 'PGSC0003DMG400016885' => 'stu', 'PGSC0003DMG400022812' => 'stu', 'PGSC0003DMG400029726' => 'stu', 'PGSC0003DMG401009243' => 'stu', 'PGSC0003DMG401031505' => 'stu', 'PGSC0003DMG402031505' => 'stu', 'Phvul.001G017600' => 'pvu', 'Phvul.002G193500' => 'pvu', 'Phvul.002G228900' => 'pvu', 'Phvul.002G236800' => 'pvu', 'Phvul.003G049500' => 'pvu', 'Phvul.005G072000' => 'pvu', 'Phvul.006G164800' => 'pvu', 'Phvul.006G185100' => 'pvu', 'Phvul.007G090000' => 'pvu', 'Potri.001G399800' => 'ptr', 'Potri.002G149900' => 'ptr', 'Potri.004G044100' => 'ptr', 'Potri.004G177600' => 'ptr', 'Potri.009G138000' => 'ptr', 'Potri.010G094000' => 'ptr', 'Potri.011G053000' => 'ptr', 'Potri.011G119300' => 'ptr', 'Potri.013G113700' => 'ptr', 'Potri.018G107800' => 'ptr', 'Potri.019G084100' => 'ptr', 'Pp3c14_23720' => 'ppa', 'Pp3c16_6340' => 'ppa', 'Pp3c23_13420' => 'ppa', 'Pp3c24_2740' => 'ppa', 'Pp3c25_860' => 'ppa', 'Pp3c8_21750' => 'ppa', 'Prupe.1G273000' => 'ppe', 'Prupe.1G273700' => 'ppe', 'Prupe.1G274100' => 'ppe', 'Prupe.2G023300' => 'ppe', 'Prupe.4G048000' => 'ppe', 'Prupe.4G080400' => 'ppe', 'Prupe.4G181200' => 'ppe', 'Prupe.8G056900' => 'ppe', 'Prupe.8G168700' => 'ppe', 'Psat1g189080' => 'psa', 'Psat1g204760' => 'psa', 'Psat4g175560' => 'psa', 'Psat4g177720' => 'psa', 'Psat5g244240' => 'psa', 'Psat6g010720' => 'psa', 'Psat6g187200' => 'psa', 'Psat7g072040' => 'psa', 'PSO017G3501' => 'pso', 'PSO063G2148' => 'pso', 'PSO063G5608' => 'pso', 'PSO210G6392' => 'pso', 'PSO541G2319' => 'pso', 'PSO541G2836' => 'pso', 'PSO541G4012' => 'pso', 'PSO541G6253' => 'pso', 'PSO675G0580' => 'pso', 'PSO675G0856' => 'pso', 'PSO675G5635' => 'pso', 'PSO675G9157' => 'pso', 'PSO832G1660' => 'pso', 'PSO832G1969' => 'pso', 'QL02p007186' => 'qlo', 'QL02p033904' => 'qlo', 'QL03p064391' => 'qlo', 'QL05p040593' => 'qlo', 'QL05p058242' => 'qlo', 'QL08p021825' => 'qlo', 'QL11p004981' => 'qlo', 'RcHm_v2.0_Chr1g0318301' => 'rch', 'RcHm_v2.0_Chr4g0418501' => 'rch', 'RcHm_v2.0_Chr4g0439971' => 'rch', 'RcHm_v2.0_Chr5g0008541' => 'rch', 'RcHm_v2.0_Chr5g0014101' => 'rch', 'RcHm_v2.0_Chr5g0014131' => 'rch', 'RcHm_v2.0_Chr5g0033621' => 'rch', 'RcHm_v2.0_Chr6g0272041' => 'rch', 'RcHm_v2.0_Chr6g0278831' => 'rch', 'Rhsim02G0130400' => 'rsi', 'Rhsim02G0171100' => 'rsi', 'Rhsim05G0053000' => 'rsi', 'Rhsim05G0053100' => 'rsi', 'Rhsim06G0096500' => 'rsi', 'Rhsim06G0096600' => 'rsi', 'Rhsim06G0199100' => 'rsi', 'Rhsim12G0062300' => 'rsi', 'Rhsim12G0062800' => 'rsi', 'Sabra02G0118600' => 'sbr', 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'Solyc03g079860.2' => 'sly', 'Solyc04g079770.3' => 'sly', 'Solyc05g007430.4' => 'sly', 'Solyc07g063150.3' => 'sly', 'Solyc08g016620.3' => 'sly', 'Solyc09g057590.3' => 'sly', 'Solyc09g057600.1' => 'sly', 'Solyc10g009050.3' => 'sly', 'Solyc11g017420.2' => 'sly', 'Sopen01g053810' => 'spe', 'Sopen02g023040' => 'spe', 'Sopen03g002440' => 'spe', 'Sopen04g033350' => 'spe', 'Sopen05g003310' => 'spe', 'Sopen07g004050' => 'spe', 'Sopen07g031340' => 'spe', 'Sopen08g006990' => 'spe', 'Sopen10g004830' => 'spe', 'Sopen11g009370' => 'spe', 'Sp1g24450' => 'spa', 'Sp1g29670' => 'spa', 'Sp1g39600' => 'spa', 'Sp2g11080' => 'spa', 'Sp2g13970' => 'spa', 'Sp4g16130' => 'spa', 'Sp6g13080' => 'spa', 'Sp7g37270' => 'spa', 'TAR371G0065' => 'tar', 'TAR376G0340' => 'tar', 'TAR376G0435' => 'tar', 'TAR381G0002' => 'tar', 'TAR381G1236' => 'tar', 'TAR624G0055' => 'tar', 'TAR624G0324' => 'tar', 'TAR624G0696' => 'tar', 'TAR624G0906' => 'tar', 'TAR625G0107' => 'tar', 'TAR626G0015' => 'tar', 'TAR626G1356' => 'tar', 'TAR627G0888' => 'tar', 'TAR628G0399' => 'tar', 'TAR628G1327' => 'tar', 'TAR629G2831' => 'tar', 'TAR629G2874' => 'tar', 'TAR633G1432' => 'tar', 'TAR633G2771' => 'tar', 'THA.LOC104803394' => 'tha', 'THA.LOC104805153' => 'tha', 'THA.LOC104806784' => 'tha', 'THA.LOC104810473' => 'tha', 'THA.LOC104813100' => 'tha', 'THA.LOC104814215' => 'tha', 'THA.LOC104815554' => 'tha', 'THA.LOC104820544' => 'tha', 'THA.LOC104824754' => 'tha', 'THA.LOC104827717' => 'tha', 'Thecc.02G031400' => 'tca', 'Thecc.02G055900' => 'tca', 'Thecc.02G350800' => 'tca', 'Thecc.06G150900' => 'tca', 'Thecc.06G186600' => 'tca', 'Thecc.07G089600' => 'tca', 'Thecc.08G020400' => 'tca', 'Thecc.08G182100' => 'tca', 'Thhalv10000873m.g' => 'esa', 'Thhalv10004185m.g' => 'esa', 'Thhalv10006981m.g' => 'esa', 'Thhalv10007204m.g' => 'esa', 'Thhalv10011374m.g' => 'esa', 'Thhalv10013482m.g' => 'esa', 'Thhalv10017801m.g' => 'esa', 'Thhalv10024983m.g' => 'esa', 'TPR.G12072' => 'tpr', 'TPR.G15769' => 'tpr', 'TPR.G16504' => 'tpr', 'TPR.G16506' => 'tpr', 'TPR.G24345' => 'tpr', 'TPR.G26666' => 'tpr', 'TPR.G27320' => 'tpr', 'TPR.G31819' => 'tpr', 'TPR.G38879' => 'tpr', 'TPR.G39015' => 'tpr', 'TPR.G8819' => 'tpr', 'TWI09G0924' => 'twi', 'TWI12G0811' => 'twi', 'TWI12G1294' => 'twi', 'TWI31G0150' => 'twi', 'TWI36G1262' => 'twi', 'TWI38G1287' => 'twi', 'TWI38G1633' => 'twi', 'TWI38G1982' => 'twi', 'TWI39G0116' => 'twi', 'TWI60G1011' => 'twi', 'TWI63G0171' => 'twi', 'TWI73G0839' => 'twi', 'TWI79G1511' => 'twi', 'unitig_0.g915' => 'ugi', 'unitig_0.g916' => 'ugi', 'unitig_21.g20219' => 'ugi', 'unitig_21.g20416' => 'ugi', 'unitig_578.g16132' => 'ugi', 'unitig_578.g16718' => 'ugi', 'unitig_62.g23481' => 'ugi', 'unitig_744.g24535' => 'ugi', 'unitig_749.g13525' => 'ugi', 'vmacro01248' => 'vma', 'vmacro02290' => 'vma', 'vmacro10946' => 'vma', 'vmacro11865' => 'vma', 'vmacro12493' => 'vma', 'vmacro17322' => 'vma', 'vmacro21599' => 'vma', 'vmacro23041' => 'vma', 'VMungo0251G0004' => 'vmu', 'VMungo0251G2639' => 'vmu', 'VMungo0251G2967' => 'vmu', 'VMungo0540G0864' => 'vmu', 'VMungo0540G1569' => 'vmu', 'VMungo0647G0317' => 'vmu', 'VMungo0720G1373' => 'vmu', 'VMungo0720G1508' => 'vmu', 'VMungo1080G0485' => 'vmu', 'VMungo1215G3177' => 'vmu', 'Zm00001eb112600' => 'zma', 'Zm00001eb120220' => 'zma', 'Zm00001eb153240' => 'zma', 'Zm00001eb168880' => 'zma', 'Zm00001eb213920' => 'zma', 'Zm00001eb228280' => 'zma', 'Zm00001eb254580' => 'zma', 'Zm00001eb272180' => 'zma', 'Zm00001eb293190' => 'zma', 'Zm00001eb322930' => 'zma', 'Zm00001eb353360' => 'zma', 'Zm00001eb353390' => 'zma', 'Zm00001eb353430' => 'zma', 'Zm00001eb353440' => 'zma', 'Zm00001eb353780' => 'zma' ), 'gf_id' => 'HOM05D000499', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000499' ), 'data_identifier' => 'HOM05D000499', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000499', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1066', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p29780' => 'bna', 'A02p33180' => 'bna', 'A03p16470' => 'bna', 'A03p66010' => 'bna', 'A04p25970' => 'bna', 'A06p01270' => 'bna', 'A06p46080' => 'bna', 'A07p11400' => 'bna', 'A08p01840' => 'bna', 'A08p08230' => 'bna', 'A08p25740' => 'bna', 'A09p32070' => 'bna', 'A09p37830' => 'bna', 'A09p42840' => 'bna', 'A09p42850' => 'bna', 'Aa31LG10G2060' => 'aar', 'Aa31LG2G7410' => 'aar', 'Aa31LG6G10200' => 'aar', 'Aa31LG6G16680' => 'aar', 'Aa31LG6G8470' => 'aar', 'Aa31LG9G12730' => 'aar', 'Aa31LG9G13680' => 'aar', 'Aa31LG9G14920' => 'aar', 'Aa31LG9G6650' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4977' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5467' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3254' => 'aag', 'Actinidia02578' => 'ach', 'Actinidia07693' => 'ach', 'Actinidia08413' => 'ach', 'Actinidia08414' => 'ach', 'Actinidia15289' => 'ach', 'Actinidia19871' => 'ach', 'Actinidia21475' => 'ach', 'Actinidia22576' => 'ach', 'Actinidia28327' => 'ach', 'Actinidia32491' => 'ach', 'Actinidia39463' => 'ach', 'Actinidia39571' => 'ach', 'Ah.01g013750' => 'amhyb', 'Ah.01g023210' => 'amhyb', 'Ah.04g164850' => 'amhyb', 'Ah.05g178060' => 'amhyb', 'Ah.07g204270' => 'amhyb', 'Ah.07g208480' => 'amhyb', 'Ah.09g237410' => 'amhyb', 'Ah.14g089460' => 'amhyb', 'AL1G41790' => 'aly', 'AL1G49050' => 'aly', 'AL1G53810' => 'aly', 'AL1G61400' => 'aly', 'AL4G18580' => 'aly', 'AL5G12510' => 'aly', 'AL5G12540' => 'aly', 'AL6G43230' => 'aly', 'AL7G10370' => 'aly', 'AL7G19250' => 'aly', 'AL8G12240' => 'aly', 'AL8G18540' => 'aly', 'Aqoxy1G02409' => 'aox', 'Aqoxy2G03993' => 'aox', 'Aqoxy3G03357' => 'aox', 'Aqoxy4G00785' => 'aox', 'Aqoxy5G02598' => 'aox', 'Aqoxy6G00132' => 'aox', 'Aqoxy7G01776' => 'aox', 'Aqoxy7G02316' => 'aox', 'Aqoxy7G03973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.12AFKW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B8730' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27IQR1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3F75VG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3RE0GA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41TCQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.527VTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FIR39' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5W8UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DA38EV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ63HS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H1I32C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HC27T5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4M8AP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7N3CZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9UVDZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LS1NQA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT1D4B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SKC4TM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCFV76' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF9Q1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQWD9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1ZM88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WE07RT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YCK7VH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJE6Q6' => 'arhy', 'AT1G28240' => 'ath', 'AT1G34550' => 'ath', 'AT1G53040' => 'ath', 'AT2G02910' => 'ath', 'AT4G09630' => 'ath', 'AT4G38500' => 'ath', 'AT5G42660' => 'ath', 'AT5G46220' => 'ath', 'ATR0152G026' => 'atr', 'ATR0564G343' => 'atr', 'ATR0706G151' => 'atr', 'ATR0733G207' => 'atr', 'ATR0751G234' => 'atr', 'ATR0807G048' => 'atr', 'ATR1091G084' => 'atr', 'Atru.chr10.1229' => 'acertr', 'Atru.chr10.1230' => 'acertr', 'Atru.chr10.1874' => 'acertr', 'Atru.chr11.1808' => 'acertr', 'Atru.chr13.1795' => 'acertr', 'Atru.chr13.570' => 'acertr', 'Atru.chr2.2608' => 'acertr', 'Atru.chr2.2609' => 'acertr', 'Atru.chr5.3428' => 'acertr', 'Atru.chr8.1171' => 'acertr', 'AUR62004651' => 'cqu', 'AUR62008675' => 'cqu', 'AUR62010014' => 'cqu', 'AUR62013004' => 'cqu', 'AUR62014825' => 'cqu', 'AUR62015015' => 'cqu', 'AUR62015151' => 'cqu', 'AUR62017020' => 'cqu', 'AUR62019422' => 'cqu', 'AUR62023570' => 'cqu', 'AUR62025571' => 'cqu', 'AUR62029098' => 'cqu', 'AUR62033863' => 'cqu', 'AUR62034296' => 'cqu', 'AUR62040075' => 'cqu', 'BcaB02g07334' => 'bca', 'BcaB02g10575' => 'bca', 'BcaB03g12119' => 'bca', 'BcaB03g12120' => 'bca', 'BcaB03g13945' => 'bca', 'BcaB04g17123' => 'bca', 'BcaB04g17867' => 'bca', 'BcaB04g19839' => 'bca', 'BcaB07g30317' => 'bca', 'BcaB07g32432' => 'bca', 'BcaB07g33362' => 'bca', 'BcaB08g36611' => 'bca', 'BcaC01g00028' => 'bca', 'BcaC01g01356' => 'bca', 'BcaC01g02034' => 'bca', 'BcaC01g06051' => 'bca', 'BcaC03g16839' => 'bca', 'BcaC03g17176' => 'bca', 'BcaC05g26829' => 'bca', 'BcaC06g31490' => 'bca', 'BcaC06g35344' => 'bca', 'BcaC06g36570' => 'bca', 'BcaC07g37537' => 'bca', 'BcaC08g43491' => 'bca', 'BcaC08g43773' => 'bca', 'BcaNung00234' => 'bca', 'BcaNung01982' => 'bca', 'BcaNung03707' => 'bca', 'BcaNung06454' => 'bca', 'BolC2t10762H' => 'bol', 'BolC2t11191H' => 'bol', 'BolC3t14322H' => 'bol', 'BolC3t19747H' => 'bol', 'BolC3t21425H' => 'bol', 'BolC4t27800H' => 'bol', 'BolC5t31423H' => 'bol', 'BolC6t35951H' => 'bol', 'BolC6t36282H' => 'bol', 'BolC7t40678H' => 'bol', 'BolC7t40679H' => 'bol', 'BolC7t42222H' => 'bol', 'BolC7t43492H' => 'bol', 'BolC7t46785H' => 'bol', 'BolC8t47853H' => 'bol', 'BolC9t56805H' => 'bol', 'BraA02t08000Z' => 'bra', 'BraA02t08341Z' => 'bra', 'BraA03t10936Z' => 'bra', 'BraA03t15657Z' => 'bra', 'BraA04t18100Z' => 'bra', 'BraA05t20523Z' => 'bra', 'BraA06t23353Z' => 'bra', 'BraA06t27473Z' => 'bra', 'BraA06t27769Z' => 'bra', 'BraA07t28928Z' => 'bra', 'BraA08t32236Z' => 'bra', 'BraA08t32841Z' => 'bra', 'BraA08t34524Z' => 'bra', 'BraA09t38742Z' => 'bra', 'BraA09t39295Z' => 'bra', 'C02p47180' => 'bna', 'C02p50990' => 'bna', 'C03p19360' => 'bna', 'C03p74950' => 'bna', 'C03p91000' => 'bna', 'C04p63260' => 'bna', 'C05p27050' => 'bna', 'C06p08750' => 'bna', 'C06p11490' => 'bna', 'C07p02820' => 'bna', 'C07p17180' => 'bna', 'C07p29440' => 'bna', 'C07p63730' => 'bna', 'C09p39260' => 'bna', 'CAN.G1164.34' => 'can', 'CAN.G1164.39' => 'can', 'CAN.G1530.3' => 'can', 'CAN.G162.61' => 'can', 'CAN.G176.6' => 'can', 'CAN.G289.49' => 'can', 'CAN.G370.21' => 'can', 'CAN.G370.22' => 'can', 'CAN.G371.117' => 'can', 'CAN.G58.37' => 'can', 'CAN.G588.98' => 'can', 'CANSAT21G2266' => 'cansat', 'CANSAT25G2799' => 'cansat', 'CANSAT35G0862' => 'cansat', 'CANSAT35G1704' => 'cansat', 'CANSAT35G1760' => 'cansat', 'CANSAT56G3971' => 'cansat', 'CANSAT56G4116' => 'cansat', 'CANSAT80G1259' => 'cansat', 'CARHR027730' => 'chi', 'CARHR033880' => 'chi', 'CARHR043270' => 'chi', 'CARHR145330' => 'chi', 'CARHR145340' => 'chi', 'CARHR175570' => 'chi', 'CARHR181570' => 'chi', 'CARHR258470' => 'chi', 'CARHR260490' => 'chi', 'CARHR294220' => 'chi', 'Carub.0001s2668' => 'cru', 'Carub.0001s3257' => 'cru', 'Carub.0001s4220' => 'cru', 'Carub.0005s0179' => 'cru', 'Carub.0006s2807' => 'cru', 'Carub.0007s0039' => 'cru', 'Carub.0008s0169' => 'cru', 'Carub.0008s0636' => 'cru', 'Ca_00338_v3' => 'car', 'Ca_00542_v3' => 'car', 'Ca_01844_v3' => 'car', 'Ca_10611_v3' => 'car', 'Ca_13326_v3' => 'car', 'Ca_17944_v3' => 'car', 'Ca_18546_v3' => 'car', 'Ca_24219_v3' => 'car', 'Ca_29972_v3' => 'car', 'CBR_g3681' => 'cbr', 'CBR_g40021' => 'cbr', 'Cc01_g08140' => 'ccan', 'Cc02_g13410' => 'ccan', 'Cc02_g37480' => 'ccan', 'Cc05_g12030' => 'ccan', 'Cc09_g03370' => 'ccan', 'Cc09_g10300' => 'ccan', 'Cc10_g03530' => 'ccan', 'Cc10_g11380' => 'ccan', 'CDE01G0176' => 'cde', 'CDE02G0675' => 'cde', 'CDE02G0942' => 'cde', 'CDE02G1153' => 'cde', 'CDE02G4177' => 'cde', 'CDE04G2117' => 'cde', 'CDE04G2736' => 'cde', 'CDE08G1161' => 'cde', 'CDE09G1238' => 'cde', 'Cfa000467' => 'cfa', 'Cfa000947' => 'cfa', 'Cfa004969' => 'cfa', 'Cfa005284' => 'cfa', 'Cfa008993' => 'cfa', 'Cfa018187' => 'cfa', 'Cfa018454' => 'cfa', 'Cfa020585' => 'cfa', 'Ciclev10000424m.g' => 'ccl', 'Ciclev10003605m.g' => 'ccl', 'Ciclev10007828m.g' => 'ccl', 'Ciclev10014620m.g' => 'ccl', 'Ciclev10015169m.g' => 'ccl', 'Ciclev10018291m.g' => 'ccl', 'Ciclev10028256m.g' => 'ccl', 'Ciclev10033822m.g' => 'ccl', 'CiPaw.05G060300' => 'cil', 'CiPaw.05G085000' => 'cil', 'CiPaw.06G083700' => 'cil', 'CiPaw.06G120300' => 'cil', 'CiPaw.09G060500' => 'cil', 'CiPaw.09G123800' => 'cil', 'CiPaw.11G169700' => 'cil', 'CiPaw.12G118300' => 'cil', 'CiPaw.15G071000' => 'cil', 'CiPaw.15G081900' => 'cil', 'ClCG01G024610' => 'cla', 'ClCG03G006070' => 'cla', 'ClCG05G019250' => 'cla', 'ClCG09G009500' => 'cla', 'ClCG11G008200' => 'cla', 'ClCG11G018080' => 'cla', 'COL.COLO4_17373' => 'col', 'COL.COLO4_22994' => 'col', 'COL.COLO4_26389' => 'col', 'COL.COLO4_27170' => 'col', 'COL.COLO4_31074' => 'col', 'COL.COLO4_31465' => 'col', 'COL.COLO4_36438' => 'col', 'COL.COLO4_36439' => 'col', 'Cpa.g.c38781' => 'cpa', 'Cpa.g.sc128.12' => 'cpa', 'Cpa.g.sc166.7' => 'cpa', 'Cpa.g.sc166.8' => 'cpa', 'Cpa.g.sc20.111' => 'cpa', 'Cpa.g.sc27.31' => 'cpa', 'Cpa.g.sc64.36' => 'cpa', 'Cpa.g.sc64.37' => 'cpa', 'Cpa.g.sc66.49' => 'cpa', 'Cpa.g.sc80.64' => 'cpa', 'CsaV3_1G012320' => 'csa', 'CsaV3_2G008480' => 'csa', 'CsaV3_2G033450' => 'csa', 'CsaV3_3G044830' => 'csa', 'CsaV3_4G033710' => 'csa', 'CsaV3_6G051730' => 'csa', 'CsaV3_7G025350' => 'csa', 'CSS0001067' => 'camsi', 'CSS0005996' => 'camsi', 'CSS0006590' => 'camsi', 'CSS0009673' => 'camsi', 'CSS0010201' => 'camsi', 'CSS0010549' => 'camsi', 'CSS0011364' => 'camsi', 'CSS0014473' => 'camsi', 'CSS0014961' => 'camsi', 'CSS0020191' => 'camsi', 'CSS0021165' => 'camsi', 'CSS0022306' => 'camsi', 'CSS0030591' => 'camsi', 'CSS0030696' => 'camsi', 'CSS0032653' => 'camsi', 'CSS0037487' => 'camsi', 'CSS0041102' => 'camsi', 'CSS0041261' => 'camsi', 'CSS0046246' => 'camsi', 'CSS0049256' => 'camsi', 'DCAR_004075' => 'dca', 'DCAR_011538' => 'dca', 'DCAR_019553' => 'dca', 'DCAR_020952' => 'dca', 'DCAR_021739' => 'dca', 'DCAR_027407' => 'dca', 'DCAR_027913' => 'dca', 'DCAR_028066' => 'dca', 'Dinv05899' => 'din', 'Dinv07563' => 'din', 'Dinv08010' => 'din', 'Dinv14125' => 'din', 'Dinv20172' => 'din', 'Dinv30743' => 'din', 'Dinv31229' => 'din', 'Dinv34162' => 'din', 'Dinv36028' => 'din', 'Dinv39368' => 'din', 'Dinv40565' => 'din', 'Dinv41706' => 'din', 'Duzib052G0089' => 'dzi', 'Duzib116G0641' => 'dzi', 'Duzib132G0069' => 'dzi', 'Duzib132G1219' => 'dzi', 'Duzib147G0278' => 'dzi', 'Duzib160G0480' => 'dzi', 'Duzib170G0661' => 'dzi', 'Duzib177G0591' => 'dzi', 'Duzib187G1353' => 'dzi', 'Duzib192G0858' => 'dzi', 'Duzib192G0883' => 'dzi', 'Duzib213G0506' => 'dzi', 'Duzib235G0289' => 'dzi', 'Duzib251G0422' => 'dzi', 'ECA232G3898' => 'eca', 'ECA233G5950' => 'eca', 'ECA234G1699' => 'eca', 'ECA234G2421' => 'eca', 'ECA236G0426' => 'eca', 'ECA236G4331' => 'eca', 'ECA248G2573' => 'eca', 'EL10Ac1g00077' => 'bvu', 'EL10Ac1g01746' => 'bvu', 'EL10Ac2g03464' => 'bvu', 'EL10Ac4g08176' => 'bvu', 'EL10Ac7g17521' => 'bvu', 'EL10Ac8g20386' => 'bvu', 'EL10Ac9g21343' => 'bvu', 'EL10Ac9g22688' => 'bvu', 'Eucgr.B03434' => 'egr', 'Eucgr.D00618' => 'egr', 'Eucgr.E02395' => 'egr', 'Eucgr.F01129' => 'egr', 'Eucgr.F02622' => 'egr', 'Eucgr.F04207' => 'egr', 'FAN01G0570' => 'fan', 'FAN03G3351' => 'fan', 'FAN06G3702' => 'fan', 'FAN07G2149' => 'fan', 'FAN10G3758' => 'fan', 'FAN11G1170' => 'fan', 'FAN11G2050' => 'fan', 'FAN11G2724' => 'fan', 'FAN12G1700' => 'fan', 'FAN12G2028' => 'fan', 'FAN15G1160' => 'fan', 'FAN15G3063' => 'fan', 'FAN16G2540' => 'fan', 'FAN16G3077' => 'fan', 'FAN16G3624' => 'fan', 'FAN17G0221' => 'fan', 'FAN20G2492' => 'fan', 'FAN20G2905' => 'fan', 'FAN21G0548' => 'fan', 'FAN21G1300' => 'fan', 'FAN22G0077' => 'fan', 'FAN22G1315' => 'fan', 'FAN24G1280' => 'fan', 'FAN24G1445' => 'fan', 'FAN24G3527' => 'fan', 'FAN25G0464' => 'fan', 'FAN25G2885' => 'fan', 'FAN25G3270' => 'fan', 'FAN27G1101' => 'fan', 'FAN27G2846' => 'fan', 'FAN27G3524' => 'fan', 'FvH4_2g11770' => 'fve', 'FvH4_2g15630' => 'fve', 'FvH4_3g05570' => 'fve', 'FvH4_3g09110' => 'fve', 'FvH4_3g19940' => 'fve', 'FvH4_4g04821' => 'fve', 'FvH4_4g31480' => 'fve', 'FvH4_7g01740' => 'fve', 'Glyma.05G130400' => 'gma', 'Glyma.05G156400' => 'gma', 'Glyma.07G197000' => 'gma', 'Glyma.08G085151' => 'gma', 'Glyma.08G114500' => 'gma', 'Glyma.08G300400' => 'gma', 'Glyma.10G215800' => 'gma', 'Glyma.12G224400' => 'gma', 'Glyma.13G179300' => 'gma', 'Glyma.13G218151' => 'gma', 'Glyma.13G238800' => 'gma', 'Glyma.13G276900' => 'gma', 'Glyma.14G078200' => 'gma', 'Glyma.15G074500' => 'gma', 'Glyma.15G094100' => 'gma', 'Glyma.17G247200' => 'gma', 'Glyma.18G120100' => 'gma', 'Glyma.20G176000' => 'gma', 'Gohir.A01G063600' => 'ghi', 'Gohir.A01G170301' => 'ghi', 'Gohir.A02G060500' => 'ghi', 'Gohir.A05G133850' => 'ghi', 'Gohir.A05G161400' => 'ghi', 'Gohir.A06G012900' => 'ghi', 'Gohir.A06G035901' => 'ghi', 'Gohir.A06G127100' => 'ghi', 'Gohir.A06G210500' => 'ghi', 'Gohir.A08G008650' => 'ghi', 'Gohir.A09G072700' => 'ghi', 'Gohir.A09G088301' => 'ghi', 'Gohir.A10G040600' => 'ghi', 'Gohir.A12G036300' => 'ghi', 'Gohir.A12G143350' => 'ghi', 'Gohir.A12G165500' => 'ghi', 'Gohir.A13G145700' => 'ghi', 'Gohir.D01G050000' => 'ghi', 'Gohir.D01G051366' => 'ghi', 'Gohir.D01G161350' => 'ghi', 'Gohir.D02G065900' => 'ghi', 'Gohir.D05G164200' => 'ghi', 'Gohir.D05G355500' => 'ghi', 'Gohir.D06G010400' => 'ghi', 'Gohir.D06G111250' => 'ghi', 'Gohir.D06G132000' => 'ghi', 'Gohir.D06G210500' => 'ghi', 'Gohir.D07G165675' => 'ghi', 'Gohir.D08G062240' => 'ghi', 'Gohir.D08G086101' => 'ghi', 'Gohir.D08G138060' => 'ghi', 'Gohir.D09G072300' => 'ghi', 'Gohir.D10G041400' => 'ghi', 'Gohir.D11G191020' => 'ghi', 'Gohir.D11G212066' => 'ghi', 'Gohir.D12G036300' => 'ghi', 'Gohir.D12G168600' => 'ghi', 'Gohir.D13G150600' => 'ghi', 'Gorai.001G057300' => 'gra', 'Gorai.002G069900' => 'gra', 'Gorai.002G200000' => 'gra', 'Gorai.003G067600' => 'gra', 'Gorai.005G074800' => 'gra', 'Gorai.006G087300' => 'gra', 'Gorai.008G037500' => 'gra', 'Gorai.008G181400' => 'gra', 'Gorai.009G169400' => 'gra', 'Gorai.009G387900' => 'gra', 'Gorai.010G013300' => 'gra', 'Gorai.010G153800' => 'gra', 'Gorai.010G255800' => 'gra', 'Gorai.011G043700' => 'gra', 'Gorai.011G198900' => 'gra', 'Gorai.013G168400' => 'gra', 'GSVIVG01005212001' => 'vvi', 'GSVIVG01006163001' => 'vvi', 'GSVIVG01009625001' => 'vvi', 'GSVIVG01014338001' => 'vvi', 'GSVIVG01020005001' => 'vvi', 'GSVIVG01021450001' => 'vvi', 'GSVIVG01023975001' => 'vvi', 'GSVIVG01034490001' => 'vvi', 'HanXRQChr04g0112071' => 'han', 'HanXRQChr05g0131151' => 'han', 'HanXRQChr09g0262371' => 'han', 'HanXRQChr09g0268401' => 'han', 'HanXRQChr10g0279241' => 'han', 'HanXRQChr10g0297961' => 'han', 'HanXRQChr11g0326231' => 'han', 'HanXRQChr11g0328471' => 'han', 'HanXRQChr16g0507941' => 'han', 'HanXRQChr17g0560211' => 'han', 'Haze_02108' => 'cav', 'Haze_02428' => 'cav', 'Haze_05593' => 'cav', 'Haze_06448' => 'cav', 'Haze_09427' => 'cav', 'Haze_12022' => 'cav', 'Haze_17612' => 'cav', 'Haze_17928' => 'cav', 'Hma1.2p1_0032F.1_g019250' => 'hma', 'Hma1.2p1_0163F.1_g072690' => 'hma', 'Hma1.2p1_0265F.1_g106710' => 'hma', 'Hma1.2p1_0286F.1_g113970' => 'hma', 'Hma1.2p1_0363F.1_g136640' => 'hma', 'Hma1.2p1_0584F.1_g183470' => 'hma', 'Hma1.2p1_0885F.1_g232570' => 'hma', 'HPP92_006022' => 'vpl', 'HPP92_007320' => 'vpl', 'HPP92_011521' => 'vpl', 'HPP92_019387' => 'vpl', 'HPP92_024038' => 'vpl', 'Hund05891' => 'sun', 'Hund06450' => 'sun', 'Hund12053' => 'sun', 'Hund16800' => 'sun', 'Hund21222' => 'sun', 'Hund22896' => 'sun', 'Hund23746' => 'sun', 'Hund27083' => 'sun', 'Lalb_Chr02g0141831' => 'lal', 'Lalb_Chr02g0141841' => 'lal', 'Lalb_Chr05g0220411' => 'lal', 'Lalb_Chr06g0162081' => 'lal', 'Lalb_Chr09g0327651' => 'lal', 'Lalb_Chr13g0295051' => 'lal', 'Lalb_Chr15g0086801' => 'lal', 'Lalb_Chr16g0383781' => 'lal', 'Lalb_Chr16g0383791' => 'lal', 'Lalb_Chr18g0055441' => 'lal', 'Lalb_Chr18g0059611' => 'lal', 'Lalb_Chr20g0109661' => 'lal', 'Lalb_Chr20g0109831' => 'lal', 'Lalb_Chr20g0121871' => 'lal', 'Lalb_Chr22g0355361' => 'lal', 'Lalb_Chr25g0286371' => 'lal', 'Lj1A1187G43' => 'lonja', 'Lj1A1205T50' => 'lonja', 'Lj1A800G33' => 'lonja', 'Lj1C1187T7' => 'lonja', 'Lj1C843T11' => 'lonja', 'Lj1g0010940' => 'lja', 'Lj2A288T69' => 'lonja', 'Lj3g0024276' => 'lja', 'Lj4A47T76' => 'lonja', 'Lj4g0005805' => 'lja', 'Lj4g0006097' => 'lja', 'Lj4g0008528' => 'lja', 'Lj4g0024907' => 'lja', 'Lj5g0012472' => 'lja', 'Lj5g0018648' => 'lja', 'Lj6C789G1' => 'lonja', 'Lj6g0004000' => 'lja', 'Lj7A292G67' => 'lonja', 'Lj7A292T64' => 'lonja', 'Lj9A400T58' => 'lonja', 'Lsat_1_v5_gn_1_126181' => 'lsa', 'Lsat_1_v5_gn_4_123041' => 'lsa', 'Lsat_1_v5_gn_4_133620' => 'lsa', 'Lsat_1_v5_gn_4_53221' => 'lsa', 'Lsat_1_v5_gn_4_71961' => 'lsa', 'Lsat_1_v5_gn_7_105241' => 'lsa', 'Lsat_1_v5_gn_7_21361' => 'lsa', 'Lsat_1_v5_gn_7_28860' => 'lsa', 'Lsat_1_v5_gn_7_31260' => 'lsa', 'Lsat_1_v5_gn_8_52801' => 'lsa', 'Manes.02G191400' => 'mes', 'Manes.03G110100' => 'mes', 'Manes.04G071100' => 'mes', 'Manes.05G100500' => 'mes', 'Manes.05G164700' => 'mes', 'Manes.15G087000' => 'mes', 'Manes.15G121500' => 'mes', 'Manes.16G028300' => 'mes', 'Manes.17G046100' => 'mes', 'Manes.17G069800' => 'mes', 'Manes.18G100500' => 'mes', 'Mapoly0002s0109' => 'mpo', 'Mapoly0024s0007' => 'mpo', 'Mapoly0089s0032' => 'mpo', 'MBI04_g42241_MAGBIO' => 'mbi', 'MBI05_g11988_MAGBIO' => 'mbi', 'MBI05_g35452_MAGBIO' => 'mbi', 'MBI07_g30179_MAGBIO' => 'mbi', 'MBI07_g35859_MAGBIO' => 'mbi', 'MBI07_g35860_MAGBIO' => 'mbi', 'MBI07_g37166_MAGBIO' => 'mbi', 'MBI08_g18172_MAGBIO' => 'mbi', 'MBI09_g08441_MAGBIO' => 'mbi', 'MBI13_g01676_MAGBIO' => 'mbi', 'MBI14_g42955_MAGBIO' => 'mbi', 'MBI16_g13161_MAGBIO' => 'mbi', 'MBI17_g27204_MAGBIO' => 'mbi', 'MBI19_g21595_MAGBIO' => 'mbi', 'MD00G1148400' => 'mdo', 'MD02G1301200' => 'mdo', 'MD03G1227800' => 'mdo', 'MD05G1041100' => 'mdo', 'MD05G1124800' => 'mdo', 'MD05G1284000' => 'mdo', 'MD05G1338800' => 'mdo', 'MD05G1338900' => 'mdo', 'MD07G1022800' => 'mdo', 'MD10G1047500' => 'mdo', 'MD10G1127500' => 'mdo', 'MD10G1262300' => 'mdo', 'MD10G1293800' => 'mdo', 'MD16G1074300' => 'mdo', 'Medtr1g021670' => 'mtr', 'Medtr1g096320' => 'mtr', 'Medtr2g013690' => 'mtr', 'Medtr2g019450' => 'mtr', 'Medtr2g085170' => 'mtr', 'Medtr4g088785' => 'mtr', 'Medtr8g055930' => 'mtr', 'Medtr8g085850' => 'mtr', 'MELO3C002605.2' => 'cme', 'MELO3C003891.2' => 'cme', 'MELO3C004012.2' => 'cme', 'MELO3C007134.2' => 'cme', 'MELO3C008118.2' => 'cme', 'MELO3C016700.2' => 'cme', 'MELO3C024127.2' => 'cme', 'MELO3C033361.2' => 'cme', 'MELO3C033362.2' => 'cme', 'Migut.C00430' => 'egut', 'Migut.C01246' => 'egut', 'Migut.E00101' => 'egut', 'Migut.H01486' => 'egut', 'Migut.H01939' => 'egut', 'Migut.K00360' => 'egut', 'Migut.M00910' => 'egut', 'Migut.M01139' => 'egut', 'Migut.N02677' => 'egut', 'MSTRG.13252' => 'ama', 'MSTRG.14701' => 'ama', 'MSTRG.1521' => 'ama', 'MSTRG.15884' => 'ama', 'MSTRG.16242' => 'ama', 'MSTRG.22285' => 'ama', 'MSTRG.22444' => 'ama', 'MSTRG.2349' => 'ama', 'MSTRG.26308' => 'ama', 'MSTRG.28296' => 'ama', 'MSTRG.9895' => 'ama', 'Nitab4.5_0000110g0060' => 'nta', 'Nitab4.5_0000420g0130' => 'nta', 'Nitab4.5_0000422g0030' => 'nta', 'Nitab4.5_0000560g0180' => 'nta', 'Nitab4.5_0000703g0100' => 'nta', 'Nitab4.5_0000786g0200' => 'nta', 'Nitab4.5_0001336g0020' => 'nta', 'Nitab4.5_0001796g0030' => 'nta', 'Nitab4.5_0003348g0060' => 'nta', 'Nitab4.5_0003698g0040' => 'nta', 'Nitab4.5_0003942g0090' => 'nta', 'Nitab4.5_0004775g0070' => 'nta', 'Nitab4.5_0004864g0030' => 'nta', 'Nitab4.5_0005615g0020' => 'nta', 'Nitab4.5_0009288g0030' => 'nta', 'Nitab4.5_0009341g0010' => 'nta', 'Nitab4.5_0009535g0010' => 'nta', 'Nn1g03995' => 'nnu', 'Nn1g04100' => 'nnu', 'Nn1g06530' => 'nnu', 'Nn3g16404' => 'nnu', 'Nn3g17212' => 'nnu', 'Nn3g20776' => 'nnu', 'Nn3g21923' => 'nnu', 'Nn5g27737' => 'nnu', 'Nn5g29461' => 'nnu', 'Nn7g38355' => 'nnu', 'Nn8g39873' => 'nnu', 'Oeu000548.2' => 'oeu', 'Oeu004672.1' => 'oeu', 'Oeu015605.2' => 'oeu', 'Oeu016092.1' => 'oeu', 'Oeu017879.3' => 'oeu', 'Oeu024910.1' => 'oeu', 'Oeu028965.1' => 'oeu', 'Oeu031269.1' => 'oeu', 'Oeu031270.1' => 'oeu', 'Oeu032535.1' => 'oeu', 'Oeu034151.1' => 'oeu', 'Oeu034152.1' => 'oeu', 'Oeu034588.2' => 'oeu', 'Oeu050846.1' => 'oeu', 'Oeu050849.2' => 'oeu', 'Oeu051063.2' => 'oeu', 'Oeu052368.1' => 'oeu', 'Oeu052370.1' => 'oeu', 'Os01g0210400' => 'osa', 'Os01g0304300' => 'osa', 'Os01g0749100' => 'osa', 'Os02g0745800' => 'osa', 'Os03g0769050' => 'osa', 'Os05g0531500' => 'osa', 'Os06g0724300' => 'osa', 'Os11g0198100' => 'osa', 'Peaxi162Scf00069g01425' => 'pax', 'Peaxi162Scf00280g00811' => 'pax', 'Peaxi162Scf00310g00615' => 'pax', 'Peaxi162Scf00362g00542' => 'pax', 'Peaxi162Scf00461g00310' => 'pax', 'Peaxi162Scf00530g00118' => 'pax', 'Peaxi162Scf00541g00057' => 'pax', 'Peaxi162Scf00661g00017' => 'pax', 'Peaxi162Scf00926g00027' => 'pax', 'Peaxi162Scf01064g00263' => 'pax', 'Peaxi162Scf01211g00135' => 'pax', 'PGR004G2336' => 'pgr', 'PGR042G0327' => 'pgr', 'PGR042G1957' => 'pgr', 'PGR042G2003' => 'pgr', 'PGR042G3929' => 'pgr', 'PGR083G1137' => 'pgr', 'PGR083G1364' => 'pgr', 'PGSC0003DMG400003381' => 'stu', 'PGSC0003DMG400003417' => 'stu', 'PGSC0003DMG400008981' => 'stu', 'PGSC0003DMG400012417' => 'stu', 'PGSC0003DMG400012823' => 'stu', 'PGSC0003DMG400016885' => 'stu', 'PGSC0003DMG400022812' => 'stu', 'PGSC0003DMG400029726' => 'stu', 'PGSC0003DMG401009243' => 'stu', 'PGSC0003DMG401031505' => 'stu', 'PGSC0003DMG402031505' => 'stu', 'Phvul.001G017600' => 'pvu', 'Phvul.002G193500' => 'pvu', 'Phvul.002G228900' => 'pvu', 'Phvul.002G236800' => 'pvu', 'Phvul.003G049500' => 'pvu', 'Phvul.005G072000' => 'pvu', 'Phvul.006G164800' => 'pvu', 'Phvul.006G185100' => 'pvu', 'Phvul.007G090000' => 'pvu', 'Potri.001G399800' => 'ptr', 'Potri.002G149900' => 'ptr', 'Potri.004G044100' => 'ptr', 'Potri.004G177600' => 'ptr', 'Potri.009G138000' => 'ptr', 'Potri.010G094000' => 'ptr', 'Potri.011G053000' => 'ptr', 'Potri.011G119300' => 'ptr', 'Potri.013G113700' => 'ptr', 'Potri.018G107800' => 'ptr', 'Potri.019G084100' => 'ptr', 'Pp3c14_23720' => 'ppa', 'Pp3c16_6340' => 'ppa', 'Pp3c23_13420' => 'ppa', 'Pp3c24_2740' => 'ppa', 'Pp3c25_860' => 'ppa', 'Pp3c8_21750' => 'ppa', 'Prupe.1G273000' => 'ppe', 'Prupe.1G273700' => 'ppe', 'Prupe.1G274100' => 'ppe', 'Prupe.2G023300' => 'ppe', 'Prupe.4G048000' => 'ppe', 'Prupe.4G080400' => 'ppe', 'Prupe.4G181200' => 'ppe', 'Prupe.8G056900' => 'ppe', 'Prupe.8G168700' => 'ppe', 'Psat1g189080' => 'psa', 'Psat1g204760' => 'psa', 'Psat4g175560' => 'psa', 'Psat4g177720' => 'psa', 'Psat5g244240' => 'psa', 'Psat6g010720' => 'psa', 'Psat6g187200' => 'psa', 'Psat7g072040' => 'psa', 'PSO017G3501' => 'pso', 'PSO063G2148' => 'pso', 'PSO063G5608' => 'pso', 'PSO210G6392' => 'pso', 'PSO541G2319' => 'pso', 'PSO541G2836' => 'pso', 'PSO541G4012' => 'pso', 'PSO541G6253' => 'pso', 'PSO675G0580' => 'pso', 'PSO675G0856' => 'pso', 'PSO675G5635' => 'pso', 'PSO675G9157' => 'pso', 'PSO832G1660' => 'pso', 'PSO832G1969' => 'pso', 'QL02p007186' => 'qlo', 'QL02p033904' => 'qlo', 'QL03p064391' => 'qlo', 'QL05p040593' => 'qlo', 'QL05p058242' => 'qlo', 'QL08p021825' => 'qlo', 'QL11p004981' => 'qlo', 'RcHm_v2.0_Chr1g0318301' => 'rch', 'RcHm_v2.0_Chr4g0418501' => 'rch', 'RcHm_v2.0_Chr4g0439971' => 'rch', 'RcHm_v2.0_Chr5g0008541' => 'rch', 'RcHm_v2.0_Chr5g0014101' => 'rch', 'RcHm_v2.0_Chr5g0014131' => 'rch', 'RcHm_v2.0_Chr5g0033621' => 'rch', 'RcHm_v2.0_Chr6g0272041' => 'rch', 'RcHm_v2.0_Chr6g0278831' => 'rch', 'Rhsim02G0130400' => 'rsi', 'Rhsim02G0171100' => 'rsi', 'Rhsim05G0053000' => 'rsi', 'Rhsim05G0053100' => 'rsi', 'Rhsim06G0096500' => 'rsi', 'Rhsim06G0096600' => 'rsi', 'Rhsim06G0199100' => 'rsi', 'Rhsim12G0062300' => 'rsi', 'Rhsim12G0062800' => 'rsi', 'Sabra02G0118600' => 'sbr', 'Sabra04G0027300' => 'sbr', 'Sabra04G0119500' => 'sbr', 'Sabra08G0112500' => 'sbr', 'Sabra11G0036800' => 'sbr', 'Sabra11G0103800' => 'sbr', 'Sabra13G0096300' => 'sbr', 'Sabra16G0262300' => 'sbr', 'Sabra18G0091700' => 'sbr', 'Sabra19G0095400' => 'sbr', 'SalBow6G3080' => 'sbo', 'SalBow7G1157' => 'sbo', 'SalBow7G2123' => 'sbo', 'SalBow7G2285' => 'sbo', 'SalBow7G3537' => 'sbo', 'SalBow8G2947' => 'sbo', 'SalBow8G4463' => 'sbo', 'SalBow8G5466' => 'sbo', 'Sc01g0001750' => 'sci', 'Sc02g0006640' => 'sci', 'Sc02g0006670' => 'sci', 'Sc04g0008220' => 'sci', 'Sc05g0006190' => 'sci', 'Sc08g0002760' => 'sci', 'Sc17g0006170' => 'sci', 'Sc22g0002050' => 'sci', 'Sc23g0001190' => 'sci', 'Sc24g0000980' => 'sci', 'Sed0006245' => 'sed', 'Sed0007543' => 'sed', 'Sed0009411' => 'sed', 'Sed0010765' => 'sed', 'Sed0012944' => 'sed', 'Sed0014682' => 'sed', 'Sed0016174' => 'sed', 'Sed0016796' => 'sed', 'Sed0020317' => 'sed', 'Sed0021467' => 'sed', 'SEGI_01316' => 'sgi', 'SEGI_03374' => 'sgi', 'SEGI_16265' => 'sgi', 'SEGI_18569' => 'sgi', 'SEGI_20351' => 'sgi', 'SEGI_26395' => 'sgi', 'SEGI_29469' => 'sgi', 'SEGI_34771' => 'sgi', 'SEGI_36769' => 'sgi', 'SEGI_37139' => 'sgi', 'SGA_v2.0_scaffold100G29687' => 'sas', 'SGA_v2.0_scaffold118G32472' => 'sas', 'SGA_v2.0_scaffold14G07051' => 'sas', 'SGA_v2.0_scaffold183G39845' => 'sas', 'SGA_v2.0_scaffold1G00174' => 'sas', 'SGA_v2.0_scaffold22G09714' => 'sas', 'SGA_v2.0_scaffold333G48992' => 'sas', 'SGA_v2.0_scaffold46G17491' => 'sas', 'SGA_v2.0_scaffold49G18294' => 'sas', 'SGA_v2.0_scaffold63G21658' => 'sas', 'SHI01741' => 'shi', 'SHI05771' => 'shi', 'SHI18077' => 'shi', 'SHI20525' => 'shi', 'SHI20527' => 'shi', 'SHI20528' => 'shi', 'SMO172G0185' => 'smo', 'SMO198G0020' => 'smo', 'SMO351G0006' => 'smo', 'SMO356G0118' => 'smo', 'SMO358G0296' => 'smo', 'SMO367G0079' => 'smo', 'SMO367G1277' => 'smo', 'Solyc01g014220.3' => 'sly', 'Solyc01g111770.2' => 'sly', 'Solyc02g078180.3' => 'sly', 'Solyc03g006430.3' => 'sly', 'Solyc03g006456.1' => 'sly', 'Solyc03g079860.2' => 'sly', 'Solyc04g079770.3' => 'sly', 'Solyc05g007430.4' => 'sly', 'Solyc07g063150.3' => 'sly', 'Solyc08g016620.3' => 'sly', 'Solyc09g057590.3' => 'sly', 'Solyc09g057600.1' => 'sly', 'Solyc10g009050.3' => 'sly', 'Solyc11g017420.2' => 'sly', 'Sopen01g053810' => 'spe', 'Sopen02g023040' => 'spe', 'Sopen03g002440' => 'spe', 'Sopen04g033350' => 'spe', 'Sopen05g003310' => 'spe', 'Sopen07g004050' => 'spe', 'Sopen07g031340' => 'spe', 'Sopen08g006990' => 'spe', 'Sopen10g004830' => 'spe', 'Sopen11g009370' => 'spe', 'Sp1g24450' => 'spa', 'Sp1g29670' => 'spa', 'Sp1g39600' => 'spa', 'Sp2g11080' => 'spa', 'Sp2g13970' => 'spa', 'Sp4g16130' => 'spa', 'Sp6g13080' => 'spa', 'Sp7g37270' => 'spa', 'TAR371G0065' => 'tar', 'TAR376G0340' => 'tar', 'TAR376G0435' => 'tar', 'TAR381G0002' => 'tar', 'TAR381G1236' => 'tar', 'TAR624G0055' => 'tar', 'TAR624G0324' => 'tar', 'TAR624G0696' => 'tar', 'TAR624G0906' => 'tar', 'TAR625G0107' => 'tar', 'TAR626G0015' => 'tar', 'TAR626G1356' => 'tar', 'TAR627G0888' => 'tar', 'TAR628G0399' => 'tar', 'TAR628G1327' => 'tar', 'TAR629G2831' => 'tar', 'TAR629G2874' => 'tar', 'TAR633G1432' => 'tar', 'TAR633G2771' => 'tar', 'THA.LOC104803394' => 'tha', 'THA.LOC104805153' => 'tha', 'THA.LOC104806784' => 'tha', 'THA.LOC104810473' => 'tha', 'THA.LOC104813100' => 'tha', 'THA.LOC104814215' => 'tha', 'THA.LOC104815554' => 'tha', 'THA.LOC104820544' => 'tha', 'THA.LOC104824754' => 'tha', 'THA.LOC104827717' => 'tha', 'Thecc.02G031400' => 'tca', 'Thecc.02G055900' => 'tca', 'Thecc.02G350800' => 'tca', 'Thecc.06G150900' => 'tca', 'Thecc.06G186600' => 'tca', 'Thecc.07G089600' => 'tca', 'Thecc.08G020400' => 'tca', 'Thecc.08G182100' => 'tca', 'Thhalv10000873m.g' => 'esa', 'Thhalv10004185m.g' => 'esa', 'Thhalv10006981m.g' => 'esa', 'Thhalv10007204m.g' => 'esa', 'Thhalv10011374m.g' => 'esa', 'Thhalv10013482m.g' => 'esa', 'Thhalv10017801m.g' => 'esa', 'Thhalv10024983m.g' => 'esa', 'TPR.G12072' => 'tpr', 'TPR.G15769' => 'tpr', 'TPR.G16504' => 'tpr', 'TPR.G16506' => 'tpr', 'TPR.G24345' => 'tpr', 'TPR.G26666' => 'tpr', 'TPR.G27320' => 'tpr', 'TPR.G31819' => 'tpr', 'TPR.G38879' => 'tpr', 'TPR.G39015' => 'tpr', 'TPR.G8819' => 'tpr', 'TWI09G0924' => 'twi', 'TWI12G0811' => 'twi', 'TWI12G1294' => 'twi', 'TWI31G0150' => 'twi', 'TWI36G1262' => 'twi', 'TWI38G1287' => 'twi', 'TWI38G1633' => 'twi', 'TWI38G1982' => 'twi', 'TWI39G0116' => 'twi', 'TWI60G1011' => 'twi', 'TWI63G0171' => 'twi', 'TWI73G0839' => 'twi', 'TWI79G1511' => 'twi', 'unitig_0.g915' => 'ugi', 'unitig_0.g916' => 'ugi', 'unitig_21.g20219' => 'ugi', 'unitig_21.g20416' => 'ugi', 'unitig_578.g16132' => 'ugi', 'unitig_578.g16718' => 'ugi', 'unitig_62.g23481' => 'ugi', 'unitig_744.g24535' => 'ugi', 'unitig_749.g13525' => 'ugi', 'vmacro01248' => 'vma', 'vmacro02290' => 'vma', 'vmacro10946' => 'vma', 'vmacro11865' => 'vma', 'vmacro12493' => 'vma', 'vmacro17322' => 'vma', 'vmacro21599' => 'vma', 'vmacro23041' => 'vma', 'VMungo0251G0004' => 'vmu', 'VMungo0251G2639' => 'vmu', 'VMungo0251G2967' => 'vmu', 'VMungo0540G0864' => 'vmu', 'VMungo0540G1569' => 'vmu', 'VMungo0647G0317' => 'vmu', 'VMungo0720G1373' => 'vmu', 'VMungo0720G1508' => 'vmu', 'VMungo1080G0485' => 'vmu', 'VMungo1215G3177' => 'vmu', 'Zm00001eb112600' => 'zma', 'Zm00001eb120220' => 'zma', 'Zm00001eb153240' => 'zma', 'Zm00001eb168880' => 'zma', 'Zm00001eb213920' => 'zma', 'Zm00001eb228280' => 'zma', 'Zm00001eb254580' => 'zma', 'Zm00001eb272180' => 'zma', 'Zm00001eb293190' => 'zma', 'Zm00001eb322930' => 'zma', 'Zm00001eb353360' => 'zma', 'Zm00001eb353390' => 'zma', 'Zm00001eb353430' => 'zma', 'Zm00001eb353440' => 'zma', 'Zm00001eb353780' => 'zma' ) $gf_id = 'HOM05D000499' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000499' ) $data_identifier = 'HOM05D000499' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 29, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 12, 'amhyb' => (int) 8, 'aly' => (int) 12, 'aox' => (int) 9, 'arhy' => (int) 26, 'ath' => (int) 8, 'atr' => (int) 7, 'acertr' => (int) 10, 'cqu' => (int) 15, 'bca' => (int) 29, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 11, 'cansat' => (int) 8, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 9, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 8, 'cpa' => (int) 10, 'csa' => (int) 7, 'camsi' => (int) 20, 'dca' => (int) 8, 'din' => (int) 12, 'dzi' => (int) 14, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 6, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 38, 'gra' => (int) 16, 'vvi' => (int) 8, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 5, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 11, 'lja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 11, 'mpo' => (int) 3, 'mbi' => (int) 14, 'mdo' => (int) 14, 'mtr' => (int) 8, 'cme' => (int) 9, 'egut' => (int) 9, 'ama' => (int) 11, 'nta' => (int) 17, 'nnu' => (int) 11, 'oeu' => (int) 18, 'osa' => (int) 8, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 6, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 9, 'rsi' => (int) 9, 'sbr' => (int) 10, 'sbo' => (int) 8, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 10, 'sas' => (int) 10, 'shi' => (int) 6, 'smo' => (int) 7, 'sly' => (int) 14, 'spe' => (int) 10, 'spa' => (int) 8, 'tar' => (int) 19, 'tha' => (int) 10, 'tca' => (int) 8, 'esa' => (int) 8, 'tpr' => (int) 11, 'twi' => (int) 13, 'ugi' => (int) 9, 'vma' => (int) 8, 'vmu' => (int) 10, 'zma' => (int) 15 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb353780' $species_info = array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ) $local_species = 'tha' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000499', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1066', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p29780' => 'bna', 'A02p33180' => 'bna', 'A03p16470' => 'bna', 'A03p66010' => 'bna', 'A04p25970' => 'bna', 'A06p01270' => 'bna', 'A06p46080' => 'bna', 'A07p11400' => 'bna', 'A08p01840' => 'bna', 'A08p08230' => 'bna', 'A08p25740' => 'bna', 'A09p32070' => 'bna', 'A09p37830' => 'bna', 'A09p42840' => 'bna', 'A09p42850' => 'bna', 'Aa31LG10G2060' => 'aar', 'Aa31LG2G7410' => 'aar', 'Aa31LG6G10200' => 'aar', 'Aa31LG6G16680' => 'aar', 'Aa31LG6G8470' => 'aar', 'Aa31LG9G12730' => 'aar', 'Aa31LG9G13680' => 'aar', 'Aa31LG9G14920' => 'aar', 'Aa31LG9G6650' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4977' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5467' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3254' => 'aag', 'Actinidia02578' => 'ach', 'Actinidia07693' => 'ach', 'Actinidia08413' => 'ach', 'Actinidia08414' => 'ach', 'Actinidia15289' => 'ach', 'Actinidia19871' => 'ach', 'Actinidia21475' => 'ach', 'Actinidia22576' => 'ach', 'Actinidia28327' => 'ach', 'Actinidia32491' => 'ach', 'Actinidia39463' => 'ach', 'Actinidia39571' => 'ach', 'Ah.01g013750' => 'amhyb', 'Ah.01g023210' => 'amhyb', 'Ah.04g164850' => 'amhyb', 'Ah.05g178060' => 'amhyb', 'Ah.07g204270' => 'amhyb', 'Ah.07g208480' => 'amhyb', 'Ah.09g237410' => 'amhyb', 'Ah.14g089460' => 'amhyb', 'AL1G41790' => 'aly', 'AL1G49050' => 'aly', 'AL1G53810' => 'aly', 'AL1G61400' => 'aly', 'AL4G18580' => 'aly', 'AL5G12510' => 'aly', 'AL5G12540' => 'aly', 'AL6G43230' => 'aly', 'AL7G10370' => 'aly', 'AL7G19250' => 'aly', 'AL8G12240' => 'aly', 'AL8G18540' => 'aly', 'Aqoxy1G02409' => 'aox', 'Aqoxy2G03993' => 'aox', 'Aqoxy3G03357' => 'aox', 'Aqoxy4G00785' => 'aox', 'Aqoxy5G02598' => 'aox', 'Aqoxy6G00132' => 'aox', 'Aqoxy7G01776' => 'aox', 'Aqoxy7G02316' => 'aox', 'Aqoxy7G03973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.12AFKW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B8730' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27IQR1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3F75VG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3RE0GA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41TCQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.527VTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FIR39' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5W8UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DA38EV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ63HS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H1I32C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HC27T5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4M8AP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7N3CZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9UVDZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LS1NQA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT1D4B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SKC4TM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCFV76' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF9Q1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQWD9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1ZM88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WE07RT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YCK7VH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJE6Q6' => 'arhy', 'AT1G28240' => 'ath', 'AT1G34550' => 'ath', 'AT1G53040' => 'ath', 'AT2G02910' => 'ath', 'AT4G09630' => 'ath', 'AT4G38500' => 'ath', 'AT5G42660' => 'ath', 'AT5G46220' => 'ath', 'ATR0152G026' => 'atr', 'ATR0564G343' => 'atr', 'ATR0706G151' => 'atr', 'ATR0733G207' => 'atr', 'ATR0751G234' => 'atr', 'ATR0807G048' => 'atr', 'ATR1091G084' => 'atr', 'Atru.chr10.1229' => 'acertr', 'Atru.chr10.1230' => 'acertr', 'Atru.chr10.1874' => 'acertr', 'Atru.chr11.1808' => 'acertr', 'Atru.chr13.1795' => 'acertr', 'Atru.chr13.570' => 'acertr', 'Atru.chr2.2608' => 'acertr', 'Atru.chr2.2609' => 'acertr', 'Atru.chr5.3428' => 'acertr', 'Atru.chr8.1171' => 'acertr', 'AUR62004651' => 'cqu', 'AUR62008675' => 'cqu', 'AUR62010014' => 'cqu', 'AUR62013004' => 'cqu', 'AUR62014825' => 'cqu', 'AUR62015015' => 'cqu', 'AUR62015151' => 'cqu', 'AUR62017020' => 'cqu', 'AUR62019422' => 'cqu', 'AUR62023570' => 'cqu', 'AUR62025571' => 'cqu', 'AUR62029098' => 'cqu', 'AUR62033863' => 'cqu', 'AUR62034296' => 'cqu', 'AUR62040075' => 'cqu', 'BcaB02g07334' => 'bca', 'BcaB02g10575' => 'bca', 'BcaB03g12119' => 'bca', 'BcaB03g12120' => 'bca', 'BcaB03g13945' => 'bca', 'BcaB04g17123' => 'bca', 'BcaB04g17867' => 'bca', 'BcaB04g19839' => 'bca', 'BcaB07g30317' => 'bca', 'BcaB07g32432' => 'bca', 'BcaB07g33362' => 'bca', 'BcaB08g36611' => 'bca', 'BcaC01g00028' => 'bca', 'BcaC01g01356' => 'bca', 'BcaC01g02034' => 'bca', 'BcaC01g06051' => 'bca', 'BcaC03g16839' => 'bca', 'BcaC03g17176' => 'bca', 'BcaC05g26829' => 'bca', 'BcaC06g31490' => 'bca', 'BcaC06g35344' => 'bca', 'BcaC06g36570' => 'bca', 'BcaC07g37537' => 'bca', 'BcaC08g43491' => 'bca', 'BcaC08g43773' => 'bca', 'BcaNung00234' => 'bca', 'BcaNung01982' => 'bca', 'BcaNung03707' => 'bca', 'BcaNung06454' => 'bca', 'BolC2t10762H' => 'bol', 'BolC2t11191H' => 'bol', 'BolC3t14322H' => 'bol', 'BolC3t19747H' => 'bol', 'BolC3t21425H' => 'bol', 'BolC4t27800H' => 'bol', 'BolC5t31423H' => 'bol', 'BolC6t35951H' => 'bol', 'BolC6t36282H' => 'bol', 'BolC7t40678H' => 'bol', 'BolC7t40679H' => 'bol', 'BolC7t42222H' => 'bol', 'BolC7t43492H' => 'bol', 'BolC7t46785H' => 'bol', 'BolC8t47853H' => 'bol', 'BolC9t56805H' => 'bol', 'BraA02t08000Z' => 'bra', 'BraA02t08341Z' => 'bra', 'BraA03t10936Z' => 'bra', 'BraA03t15657Z' => 'bra', 'BraA04t18100Z' => 'bra', 'BraA05t20523Z' => 'bra', 'BraA06t23353Z' => 'bra', 'BraA06t27473Z' => 'bra', 'BraA06t27769Z' => 'bra', 'BraA07t28928Z' => 'bra', 'BraA08t32236Z' => 'bra', 'BraA08t32841Z' => 'bra', 'BraA08t34524Z' => 'bra', 'BraA09t38742Z' => 'bra', 'BraA09t39295Z' => 'bra', 'C02p47180' => 'bna', 'C02p50990' => 'bna', 'C03p19360' => 'bna', 'C03p74950' => 'bna', 'C03p91000' => 'bna', 'C04p63260' => 'bna', 'C05p27050' => 'bna', 'C06p08750' => 'bna', 'C06p11490' => 'bna', 'C07p02820' => 'bna', 'C07p17180' => 'bna', 'C07p29440' => 'bna', 'C07p63730' => 'bna', 'C09p39260' => 'bna', 'CAN.G1164.34' => 'can', 'CAN.G1164.39' => 'can', 'CAN.G1530.3' => 'can', 'CAN.G162.61' => 'can', 'CAN.G176.6' => 'can', 'CAN.G289.49' => 'can', 'CAN.G370.21' => 'can', 'CAN.G370.22' => 'can', 'CAN.G371.117' => 'can', 'CAN.G58.37' => 'can', 'CAN.G588.98' => 'can', 'CANSAT21G2266' => 'cansat', 'CANSAT25G2799' => 'cansat', 'CANSAT35G0862' => 'cansat', 'CANSAT35G1704' => 'cansat', 'CANSAT35G1760' => 'cansat', 'CANSAT56G3971' => 'cansat', 'CANSAT56G4116' => 'cansat', 'CANSAT80G1259' => 'cansat', 'CARHR027730' => 'chi', 'CARHR033880' => 'chi', 'CARHR043270' => 'chi', 'CARHR145330' => 'chi', 'CARHR145340' => 'chi', 'CARHR175570' => 'chi', 'CARHR181570' => 'chi', 'CARHR258470' => 'chi', 'CARHR260490' => 'chi', 'CARHR294220' => 'chi', 'Carub.0001s2668' => 'cru', 'Carub.0001s3257' => 'cru', 'Carub.0001s4220' => 'cru', 'Carub.0005s0179' => 'cru', 'Carub.0006s2807' => 'cru', 'Carub.0007s0039' => 'cru', 'Carub.0008s0169' => 'cru', 'Carub.0008s0636' => 'cru', 'Ca_00338_v3' => 'car', 'Ca_00542_v3' => 'car', 'Ca_01844_v3' => 'car', 'Ca_10611_v3' => 'car', 'Ca_13326_v3' => 'car', 'Ca_17944_v3' => 'car', 'Ca_18546_v3' => 'car', 'Ca_24219_v3' => 'car', 'Ca_29972_v3' => 'car', 'CBR_g3681' => 'cbr', 'CBR_g40021' => 'cbr', 'Cc01_g08140' => 'ccan', 'Cc02_g13410' => 'ccan', 'Cc02_g37480' => 'ccan', 'Cc05_g12030' => 'ccan', 'Cc09_g03370' => 'ccan', 'Cc09_g10300' => 'ccan', 'Cc10_g03530' => 'ccan', 'Cc10_g11380' => 'ccan', 'CDE01G0176' => 'cde', 'CDE02G0675' => 'cde', 'CDE02G0942' => 'cde', 'CDE02G1153' => 'cde', 'CDE02G4177' => 'cde', 'CDE04G2117' => 'cde', 'CDE04G2736' => 'cde', 'CDE08G1161' => 'cde', 'CDE09G1238' => 'cde', 'Cfa000467' => 'cfa', 'Cfa000947' => 'cfa', 'Cfa004969' => 'cfa', 'Cfa005284' => 'cfa', 'Cfa008993' => 'cfa', 'Cfa018187' => 'cfa', 'Cfa018454' => 'cfa', 'Cfa020585' => 'cfa', 'Ciclev10000424m.g' => 'ccl', 'Ciclev10003605m.g' => 'ccl', 'Ciclev10007828m.g' => 'ccl', 'Ciclev10014620m.g' => 'ccl', 'Ciclev10015169m.g' => 'ccl', 'Ciclev10018291m.g' => 'ccl', 'Ciclev10028256m.g' => 'ccl', 'Ciclev10033822m.g' => 'ccl', 'CiPaw.05G060300' => 'cil', 'CiPaw.05G085000' => 'cil', 'CiPaw.06G083700' => 'cil', 'CiPaw.06G120300' => 'cil', 'CiPaw.09G060500' => 'cil', 'CiPaw.09G123800' => 'cil', 'CiPaw.11G169700' => 'cil', 'CiPaw.12G118300' => 'cil', 'CiPaw.15G071000' => 'cil', 'CiPaw.15G081900' => 'cil', 'ClCG01G024610' => 'cla', 'ClCG03G006070' => 'cla', 'ClCG05G019250' => 'cla', 'ClCG09G009500' => 'cla', 'ClCG11G008200' => 'cla', 'ClCG11G018080' => 'cla', 'COL.COLO4_17373' => 'col', 'COL.COLO4_22994' => 'col', 'COL.COLO4_26389' => 'col', 'COL.COLO4_27170' => 'col', 'COL.COLO4_31074' => 'col', 'COL.COLO4_31465' => 'col', 'COL.COLO4_36438' => 'col', 'COL.COLO4_36439' => 'col', 'Cpa.g.c38781' => 'cpa', 'Cpa.g.sc128.12' => 'cpa', 'Cpa.g.sc166.7' => 'cpa', 'Cpa.g.sc166.8' => 'cpa', 'Cpa.g.sc20.111' => 'cpa', 'Cpa.g.sc27.31' => 'cpa', 'Cpa.g.sc64.36' => 'cpa', 'Cpa.g.sc64.37' => 'cpa', 'Cpa.g.sc66.49' => 'cpa', 'Cpa.g.sc80.64' => 'cpa', 'CsaV3_1G012320' => 'csa', 'CsaV3_2G008480' => 'csa', 'CsaV3_2G033450' => 'csa', 'CsaV3_3G044830' => 'csa', 'CsaV3_4G033710' => 'csa', 'CsaV3_6G051730' => 'csa', 'CsaV3_7G025350' => 'csa', 'CSS0001067' => 'camsi', 'CSS0005996' => 'camsi', 'CSS0006590' => 'camsi', 'CSS0009673' => 'camsi', 'CSS0010201' => 'camsi', 'CSS0010549' => 'camsi', 'CSS0011364' => 'camsi', 'CSS0014473' => 'camsi', 'CSS0014961' => 'camsi', 'CSS0020191' => 'camsi', 'CSS0021165' => 'camsi', 'CSS0022306' => 'camsi', 'CSS0030591' => 'camsi', 'CSS0030696' => 'camsi', 'CSS0032653' => 'camsi', 'CSS0037487' => 'camsi', 'CSS0041102' => 'camsi', 'CSS0041261' => 'camsi', 'CSS0046246' => 'camsi', 'CSS0049256' => 'camsi', 'DCAR_004075' => 'dca', 'DCAR_011538' => 'dca', 'DCAR_019553' => 'dca', 'DCAR_020952' => 'dca', 'DCAR_021739' => 'dca', 'DCAR_027407' => 'dca', 'DCAR_027913' => 'dca', 'DCAR_028066' => 'dca', 'Dinv05899' => 'din', 'Dinv07563' => 'din', 'Dinv08010' => 'din', 'Dinv14125' => 'din', 'Dinv20172' => 'din', 'Dinv30743' => 'din', 'Dinv31229' => 'din', 'Dinv34162' => 'din', 'Dinv36028' => 'din', 'Dinv39368' => 'din', 'Dinv40565' => 'din', 'Dinv41706' => 'din', 'Duzib052G0089' => 'dzi', 'Duzib116G0641' => 'dzi', 'Duzib132G0069' => 'dzi', 'Duzib132G1219' => 'dzi', 'Duzib147G0278' => 'dzi', 'Duzib160G0480' => 'dzi', 'Duzib170G0661' => 'dzi', 'Duzib177G0591' => 'dzi', 'Duzib187G1353' => 'dzi', 'Duzib192G0858' => 'dzi', 'Duzib192G0883' => 'dzi', 'Duzib213G0506' => 'dzi', 'Duzib235G0289' => 'dzi', 'Duzib251G0422' => 'dzi', 'ECA232G3898' => 'eca', 'ECA233G5950' => 'eca', 'ECA234G1699' => 'eca', 'ECA234G2421' => 'eca', 'ECA236G0426' => 'eca', 'ECA236G4331' => 'eca', 'ECA248G2573' => 'eca', 'EL10Ac1g00077' => 'bvu', 'EL10Ac1g01746' => 'bvu', 'EL10Ac2g03464' => 'bvu', 'EL10Ac4g08176' => 'bvu', 'EL10Ac7g17521' => 'bvu', 'EL10Ac8g20386' => 'bvu', 'EL10Ac9g21343' => 'bvu', 'EL10Ac9g22688' => 'bvu', 'Eucgr.B03434' => 'egr', 'Eucgr.D00618' => 'egr', 'Eucgr.E02395' => 'egr', 'Eucgr.F01129' => 'egr', 'Eucgr.F02622' => 'egr', 'Eucgr.F04207' => 'egr', 'FAN01G0570' => 'fan', 'FAN03G3351' => 'fan', 'FAN06G3702' => 'fan', 'FAN07G2149' => 'fan', 'FAN10G3758' => 'fan', 'FAN11G1170' => 'fan', 'FAN11G2050' => 'fan', 'FAN11G2724' => 'fan', 'FAN12G1700' => 'fan', 'FAN12G2028' => 'fan', 'FAN15G1160' => 'fan', 'FAN15G3063' => 'fan', 'FAN16G2540' => 'fan', 'FAN16G3077' => 'fan', 'FAN16G3624' => 'fan', 'FAN17G0221' => 'fan', 'FAN20G2492' => 'fan', 'FAN20G2905' => 'fan', 'FAN21G0548' => 'fan', 'FAN21G1300' => 'fan', 'FAN22G0077' => 'fan', 'FAN22G1315' => 'fan', 'FAN24G1280' => 'fan', 'FAN24G1445' => 'fan', 'FAN24G3527' => 'fan', 'FAN25G0464' => 'fan', 'FAN25G2885' => 'fan', 'FAN25G3270' => 'fan', 'FAN27G1101' => 'fan', 'FAN27G2846' => 'fan', 'FAN27G3524' => 'fan', 'FvH4_2g11770' => 'fve', 'FvH4_2g15630' => 'fve', 'FvH4_3g05570' => 'fve', 'FvH4_3g09110' => 'fve', 'FvH4_3g19940' => 'fve', 'FvH4_4g04821' => 'fve', 'FvH4_4g31480' => 'fve', 'FvH4_7g01740' => 'fve', 'Glyma.05G130400' => 'gma', 'Glyma.05G156400' => 'gma', 'Glyma.07G197000' => 'gma', 'Glyma.08G085151' => 'gma', 'Glyma.08G114500' => 'gma', 'Glyma.08G300400' => 'gma', 'Glyma.10G215800' => 'gma', 'Glyma.12G224400' => 'gma', 'Glyma.13G179300' => 'gma', 'Glyma.13G218151' => 'gma', 'Glyma.13G238800' => 'gma', 'Glyma.13G276900' => 'gma', 'Glyma.14G078200' => 'gma', 'Glyma.15G074500' => 'gma', 'Glyma.15G094100' => 'gma', 'Glyma.17G247200' => 'gma', 'Glyma.18G120100' => 'gma', 'Glyma.20G176000' => 'gma', 'Gohir.A01G063600' => 'ghi', 'Gohir.A01G170301' => 'ghi', 'Gohir.A02G060500' => 'ghi', 'Gohir.A05G133850' => 'ghi', 'Gohir.A05G161400' => 'ghi', 'Gohir.A06G012900' => 'ghi', 'Gohir.A06G035901' => 'ghi', 'Gohir.A06G127100' => 'ghi', 'Gohir.A06G210500' => 'ghi', 'Gohir.A08G008650' => 'ghi', 'Gohir.A09G072700' => 'ghi', 'Gohir.A09G088301' => 'ghi', 'Gohir.A10G040600' => 'ghi', 'Gohir.A12G036300' => 'ghi', 'Gohir.A12G143350' => 'ghi', 'Gohir.A12G165500' => 'ghi', 'Gohir.A13G145700' => 'ghi', 'Gohir.D01G050000' => 'ghi', 'Gohir.D01G051366' => 'ghi', 'Gohir.D01G161350' => 'ghi', 'Gohir.D02G065900' => 'ghi', 'Gohir.D05G164200' => 'ghi', 'Gohir.D05G355500' => 'ghi', 'Gohir.D06G010400' => 'ghi', 'Gohir.D06G111250' => 'ghi', 'Gohir.D06G132000' => 'ghi', 'Gohir.D06G210500' => 'ghi', 'Gohir.D07G165675' => 'ghi', 'Gohir.D08G062240' => 'ghi', 'Gohir.D08G086101' => 'ghi', 'Gohir.D08G138060' => 'ghi', 'Gohir.D09G072300' => 'ghi', 'Gohir.D10G041400' => 'ghi', 'Gohir.D11G191020' => 'ghi', 'Gohir.D11G212066' => 'ghi', 'Gohir.D12G036300' => 'ghi', 'Gohir.D12G168600' => 'ghi', 'Gohir.D13G150600' => 'ghi', 'Gorai.001G057300' => 'gra', 'Gorai.002G069900' => 'gra', 'Gorai.002G200000' => 'gra', 'Gorai.003G067600' => 'gra', 'Gorai.005G074800' => 'gra', 'Gorai.006G087300' => 'gra', 'Gorai.008G037500' => 'gra', 'Gorai.008G181400' => 'gra', 'Gorai.009G169400' => 'gra', 'Gorai.009G387900' => 'gra', 'Gorai.010G013300' => 'gra', 'Gorai.010G153800' => 'gra', 'Gorai.010G255800' => 'gra', 'Gorai.011G043700' => 'gra', 'Gorai.011G198900' => 'gra', 'Gorai.013G168400' => 'gra', 'GSVIVG01005212001' => 'vvi', 'GSVIVG01006163001' => 'vvi', 'GSVIVG01009625001' => 'vvi', 'GSVIVG01014338001' => 'vvi', 'GSVIVG01020005001' => 'vvi', 'GSVIVG01021450001' => 'vvi', 'GSVIVG01023975001' => 'vvi', 'GSVIVG01034490001' => 'vvi', 'HanXRQChr04g0112071' => 'han', 'HanXRQChr05g0131151' => 'han', 'HanXRQChr09g0262371' => 'han', 'HanXRQChr09g0268401' => 'han', 'HanXRQChr10g0279241' => 'han', 'HanXRQChr10g0297961' => 'han', 'HanXRQChr11g0326231' => 'han', 'HanXRQChr11g0328471' => 'han', 'HanXRQChr16g0507941' => 'han', 'HanXRQChr17g0560211' => 'han', 'Haze_02108' => 'cav', 'Haze_02428' => 'cav', 'Haze_05593' => 'cav', 'Haze_06448' => 'cav', 'Haze_09427' => 'cav', 'Haze_12022' => 'cav', 'Haze_17612' => 'cav', 'Haze_17928' => 'cav', 'Hma1.2p1_0032F.1_g019250' => 'hma', 'Hma1.2p1_0163F.1_g072690' => 'hma', 'Hma1.2p1_0265F.1_g106710' => 'hma', 'Hma1.2p1_0286F.1_g113970' => 'hma', 'Hma1.2p1_0363F.1_g136640' => 'hma', 'Hma1.2p1_0584F.1_g183470' => 'hma', 'Hma1.2p1_0885F.1_g232570' => 'hma', 'HPP92_006022' => 'vpl', 'HPP92_007320' => 'vpl', 'HPP92_011521' => 'vpl', 'HPP92_019387' => 'vpl', 'HPP92_024038' => 'vpl', 'Hund05891' => 'sun', 'Hund06450' => 'sun', 'Hund12053' => 'sun', 'Hund16800' => 'sun', 'Hund21222' => 'sun', 'Hund22896' => 'sun', 'Hund23746' => 'sun', 'Hund27083' => 'sun', 'Lalb_Chr02g0141831' => 'lal', 'Lalb_Chr02g0141841' => 'lal', 'Lalb_Chr05g0220411' => 'lal', 'Lalb_Chr06g0162081' => 'lal', 'Lalb_Chr09g0327651' => 'lal', 'Lalb_Chr13g0295051' => 'lal', 'Lalb_Chr15g0086801' => 'lal', 'Lalb_Chr16g0383781' => 'lal', 'Lalb_Chr16g0383791' => 'lal', 'Lalb_Chr18g0055441' => 'lal', 'Lalb_Chr18g0059611' => 'lal', 'Lalb_Chr20g0109661' => 'lal', 'Lalb_Chr20g0109831' => 'lal', 'Lalb_Chr20g0121871' => 'lal', 'Lalb_Chr22g0355361' => 'lal', 'Lalb_Chr25g0286371' => 'lal', 'Lj1A1187G43' => 'lonja', 'Lj1A1205T50' => 'lonja', 'Lj1A800G33' => 'lonja', 'Lj1C1187T7' => 'lonja', 'Lj1C843T11' => 'lonja', 'Lj1g0010940' => 'lja', 'Lj2A288T69' => 'lonja', 'Lj3g0024276' => 'lja', 'Lj4A47T76' => 'lonja', 'Lj4g0005805' => 'lja', 'Lj4g0006097' => 'lja', 'Lj4g0008528' => 'lja', 'Lj4g0024907' => 'lja', 'Lj5g0012472' => 'lja', 'Lj5g0018648' => 'lja', 'Lj6C789G1' => 'lonja', 'Lj6g0004000' => 'lja', 'Lj7A292G67' => 'lonja', 'Lj7A292T64' => 'lonja', 'Lj9A400T58' => 'lonja', 'Lsat_1_v5_gn_1_126181' => 'lsa', 'Lsat_1_v5_gn_4_123041' => 'lsa', 'Lsat_1_v5_gn_4_133620' => 'lsa', 'Lsat_1_v5_gn_4_53221' => 'lsa', 'Lsat_1_v5_gn_4_71961' => 'lsa', 'Lsat_1_v5_gn_7_105241' => 'lsa', 'Lsat_1_v5_gn_7_21361' => 'lsa', 'Lsat_1_v5_gn_7_28860' => 'lsa', 'Lsat_1_v5_gn_7_31260' => 'lsa', 'Lsat_1_v5_gn_8_52801' => 'lsa', 'Manes.02G191400' => 'mes', 'Manes.03G110100' => 'mes', 'Manes.04G071100' => 'mes', 'Manes.05G100500' => 'mes', 'Manes.05G164700' => 'mes', 'Manes.15G087000' => 'mes', 'Manes.15G121500' => 'mes', 'Manes.16G028300' => 'mes', 'Manes.17G046100' => 'mes', 'Manes.17G069800' => 'mes', 'Manes.18G100500' => 'mes', 'Mapoly0002s0109' => 'mpo', 'Mapoly0024s0007' => 'mpo', 'Mapoly0089s0032' => 'mpo', 'MBI04_g42241_MAGBIO' => 'mbi', 'MBI05_g11988_MAGBIO' => 'mbi', 'MBI05_g35452_MAGBIO' => 'mbi', 'MBI07_g30179_MAGBIO' => 'mbi', 'MBI07_g35859_MAGBIO' => 'mbi', 'MBI07_g35860_MAGBIO' => 'mbi', 'MBI07_g37166_MAGBIO' => 'mbi', 'MBI08_g18172_MAGBIO' => 'mbi', 'MBI09_g08441_MAGBIO' => 'mbi', 'MBI13_g01676_MAGBIO' => 'mbi', 'MBI14_g42955_MAGBIO' => 'mbi', 'MBI16_g13161_MAGBIO' => 'mbi', 'MBI17_g27204_MAGBIO' => 'mbi', 'MBI19_g21595_MAGBIO' => 'mbi', 'MD00G1148400' => 'mdo', 'MD02G1301200' => 'mdo', 'MD03G1227800' => 'mdo', 'MD05G1041100' => 'mdo', 'MD05G1124800' => 'mdo', 'MD05G1284000' => 'mdo', 'MD05G1338800' => 'mdo', 'MD05G1338900' => 'mdo', 'MD07G1022800' => 'mdo', 'MD10G1047500' => 'mdo', 'MD10G1127500' => 'mdo', 'MD10G1262300' => 'mdo', 'MD10G1293800' => 'mdo', 'MD16G1074300' => 'mdo', 'Medtr1g021670' => 'mtr', 'Medtr1g096320' => 'mtr', 'Medtr2g013690' => 'mtr', 'Medtr2g019450' => 'mtr', 'Medtr2g085170' => 'mtr', 'Medtr4g088785' => 'mtr', 'Medtr8g055930' => 'mtr', 'Medtr8g085850' => 'mtr', 'MELO3C002605.2' => 'cme', 'MELO3C003891.2' => 'cme', 'MELO3C004012.2' => 'cme', 'MELO3C007134.2' => 'cme', 'MELO3C008118.2' => 'cme', 'MELO3C016700.2' => 'cme', 'MELO3C024127.2' => 'cme', 'MELO3C033361.2' => 'cme', 'MELO3C033362.2' => 'cme', 'Migut.C00430' => 'egut', 'Migut.C01246' => 'egut', 'Migut.E00101' => 'egut', 'Migut.H01486' => 'egut', 'Migut.H01939' => 'egut', 'Migut.K00360' => 'egut', 'Migut.M00910' => 'egut', 'Migut.M01139' => 'egut', 'Migut.N02677' => 'egut', 'MSTRG.13252' => 'ama', 'MSTRG.14701' => 'ama', 'MSTRG.1521' => 'ama', 'MSTRG.15884' => 'ama', 'MSTRG.16242' => 'ama', 'MSTRG.22285' => 'ama', 'MSTRG.22444' => 'ama', 'MSTRG.2349' => 'ama', 'MSTRG.26308' => 'ama', 'MSTRG.28296' => 'ama', 'MSTRG.9895' => 'ama', 'Nitab4.5_0000110g0060' => 'nta', 'Nitab4.5_0000420g0130' => 'nta', 'Nitab4.5_0000422g0030' => 'nta', 'Nitab4.5_0000560g0180' => 'nta', 'Nitab4.5_0000703g0100' => 'nta', 'Nitab4.5_0000786g0200' => 'nta', 'Nitab4.5_0001336g0020' => 'nta', 'Nitab4.5_0001796g0030' => 'nta', 'Nitab4.5_0003348g0060' => 'nta', 'Nitab4.5_0003698g0040' => 'nta', 'Nitab4.5_0003942g0090' => 'nta', 'Nitab4.5_0004775g0070' => 'nta', 'Nitab4.5_0004864g0030' => 'nta', 'Nitab4.5_0005615g0020' => 'nta', 'Nitab4.5_0009288g0030' => 'nta', 'Nitab4.5_0009341g0010' => 'nta', 'Nitab4.5_0009535g0010' => 'nta', 'Nn1g03995' => 'nnu', 'Nn1g04100' => 'nnu', 'Nn1g06530' => 'nnu', 'Nn3g16404' => 'nnu', 'Nn3g17212' => 'nnu', 'Nn3g20776' => 'nnu', 'Nn3g21923' => 'nnu', 'Nn5g27737' => 'nnu', 'Nn5g29461' => 'nnu', 'Nn7g38355' => 'nnu', 'Nn8g39873' => 'nnu', 'Oeu000548.2' => 'oeu', 'Oeu004672.1' => 'oeu', 'Oeu015605.2' => 'oeu', 'Oeu016092.1' => 'oeu', 'Oeu017879.3' => 'oeu', 'Oeu024910.1' => 'oeu', 'Oeu028965.1' => 'oeu', 'Oeu031269.1' => 'oeu', 'Oeu031270.1' => 'oeu', 'Oeu032535.1' => 'oeu', 'Oeu034151.1' => 'oeu', 'Oeu034152.1' => 'oeu', 'Oeu034588.2' => 'oeu', 'Oeu050846.1' => 'oeu', 'Oeu050849.2' => 'oeu', 'Oeu051063.2' => 'oeu', 'Oeu052368.1' => 'oeu', 'Oeu052370.1' => 'oeu', 'Os01g0210400' => 'osa', 'Os01g0304300' => 'osa', 'Os01g0749100' => 'osa', 'Os02g0745800' => 'osa', 'Os03g0769050' => 'osa', 'Os05g0531500' => 'osa', 'Os06g0724300' => 'osa', 'Os11g0198100' => 'osa', 'Peaxi162Scf00069g01425' => 'pax', 'Peaxi162Scf00280g00811' => 'pax', 'Peaxi162Scf00310g00615' => 'pax', 'Peaxi162Scf00362g00542' => 'pax', 'Peaxi162Scf00461g00310' => 'pax', 'Peaxi162Scf00530g00118' => 'pax', 'Peaxi162Scf00541g00057' => 'pax', 'Peaxi162Scf00661g00017' => 'pax', 'Peaxi162Scf00926g00027' => 'pax', 'Peaxi162Scf01064g00263' => 'pax', 'Peaxi162Scf01211g00135' => 'pax', 'PGR004G2336' => 'pgr', 'PGR042G0327' => 'pgr', 'PGR042G1957' => 'pgr', 'PGR042G2003' => 'pgr', 'PGR042G3929' => 'pgr', 'PGR083G1137' => 'pgr', 'PGR083G1364' => 'pgr', 'PGSC0003DMG400003381' => 'stu', 'PGSC0003DMG400003417' => 'stu', 'PGSC0003DMG400008981' => 'stu', 'PGSC0003DMG400012417' => 'stu', 'PGSC0003DMG400012823' => 'stu', 'PGSC0003DMG400016885' => 'stu', 'PGSC0003DMG400022812' => 'stu', 'PGSC0003DMG400029726' => 'stu', 'PGSC0003DMG401009243' => 'stu', 'PGSC0003DMG401031505' => 'stu', 'PGSC0003DMG402031505' => 'stu', 'Phvul.001G017600' => 'pvu', 'Phvul.002G193500' => 'pvu', 'Phvul.002G228900' => 'pvu', 'Phvul.002G236800' => 'pvu', 'Phvul.003G049500' => 'pvu', 'Phvul.005G072000' => 'pvu', 'Phvul.006G164800' => 'pvu', 'Phvul.006G185100' => 'pvu', 'Phvul.007G090000' => 'pvu', 'Potri.001G399800' => 'ptr', 'Potri.002G149900' => 'ptr', 'Potri.004G044100' => 'ptr', 'Potri.004G177600' => 'ptr', 'Potri.009G138000' => 'ptr', 'Potri.010G094000' => 'ptr', 'Potri.011G053000' => 'ptr', 'Potri.011G119300' => 'ptr', 'Potri.013G113700' => 'ptr', 'Potri.018G107800' => 'ptr', 'Potri.019G084100' => 'ptr', 'Pp3c14_23720' => 'ppa', 'Pp3c16_6340' => 'ppa', 'Pp3c23_13420' => 'ppa', 'Pp3c24_2740' => 'ppa', 'Pp3c25_860' => 'ppa', 'Pp3c8_21750' => 'ppa', 'Prupe.1G273000' => 'ppe', 'Prupe.1G273700' => 'ppe', 'Prupe.1G274100' => 'ppe', 'Prupe.2G023300' => 'ppe', 'Prupe.4G048000' => 'ppe', 'Prupe.4G080400' => 'ppe', 'Prupe.4G181200' => 'ppe', 'Prupe.8G056900' => 'ppe', 'Prupe.8G168700' => 'ppe', 'Psat1g189080' => 'psa', 'Psat1g204760' => 'psa', 'Psat4g175560' => 'psa', 'Psat4g177720' => 'psa', 'Psat5g244240' => 'psa', 'Psat6g010720' => 'psa', 'Psat6g187200' => 'psa', 'Psat7g072040' => 'psa', 'PSO017G3501' => 'pso', 'PSO063G2148' => 'pso', 'PSO063G5608' => 'pso', 'PSO210G6392' => 'pso', 'PSO541G2319' => 'pso', 'PSO541G2836' => 'pso', 'PSO541G4012' => 'pso', 'PSO541G6253' => 'pso', 'PSO675G0580' => 'pso', 'PSO675G0856' => 'pso', 'PSO675G5635' => 'pso', 'PSO675G9157' => 'pso', 'PSO832G1660' => 'pso', 'PSO832G1969' => 'pso', 'QL02p007186' => 'qlo', 'QL02p033904' => 'qlo', 'QL03p064391' => 'qlo', 'QL05p040593' => 'qlo', 'QL05p058242' => 'qlo', 'QL08p021825' => 'qlo', 'QL11p004981' => 'qlo', 'RcHm_v2.0_Chr1g0318301' => 'rch', 'RcHm_v2.0_Chr4g0418501' => 'rch', 'RcHm_v2.0_Chr4g0439971' => 'rch', 'RcHm_v2.0_Chr5g0008541' => 'rch', 'RcHm_v2.0_Chr5g0014101' => 'rch', 'RcHm_v2.0_Chr5g0014131' => 'rch', 'RcHm_v2.0_Chr5g0033621' => 'rch', 'RcHm_v2.0_Chr6g0272041' => 'rch', 'RcHm_v2.0_Chr6g0278831' => 'rch', 'Rhsim02G0130400' => 'rsi', 'Rhsim02G0171100' => 'rsi', 'Rhsim05G0053000' => 'rsi', 'Rhsim05G0053100' => 'rsi', 'Rhsim06G0096500' => 'rsi', 'Rhsim06G0096600' => 'rsi', 'Rhsim06G0199100' => 'rsi', 'Rhsim12G0062300' => 'rsi', 'Rhsim12G0062800' => 'rsi', 'Sabra02G0118600' => 'sbr', 'Sabra04G0027300' => 'sbr', 'Sabra04G0119500' => 'sbr', 'Sabra08G0112500' => 'sbr', 'Sabra11G0036800' => 'sbr', 'Sabra11G0103800' => 'sbr', 'Sabra13G0096300' => 'sbr', 'Sabra16G0262300' => 'sbr', 'Sabra18G0091700' => 'sbr', 'Sabra19G0095400' => 'sbr', 'SalBow6G3080' => 'sbo', 'SalBow7G1157' => 'sbo', 'SalBow7G2123' => 'sbo', 'SalBow7G2285' => 'sbo', 'SalBow7G3537' => 'sbo', 'SalBow8G2947' => 'sbo', 'SalBow8G4463' => 'sbo', 'SalBow8G5466' => 'sbo', 'Sc01g0001750' => 'sci', 'Sc02g0006640' => 'sci', 'Sc02g0006670' => 'sci', 'Sc04g0008220' => 'sci', 'Sc05g0006190' => 'sci', 'Sc08g0002760' => 'sci', 'Sc17g0006170' => 'sci', 'Sc22g0002050' => 'sci', 'Sc23g0001190' => 'sci', 'Sc24g0000980' => 'sci', 'Sed0006245' => 'sed', 'Sed0007543' => 'sed', 'Sed0009411' => 'sed', 'Sed0010765' => 'sed', 'Sed0012944' => 'sed', 'Sed0014682' => 'sed', 'Sed0016174' => 'sed', 'Sed0016796' => 'sed', 'Sed0020317' => 'sed', 'Sed0021467' => 'sed', 'SEGI_01316' => 'sgi', 'SEGI_03374' => 'sgi', 'SEGI_16265' => 'sgi', 'SEGI_18569' => 'sgi', 'SEGI_20351' => 'sgi', 'SEGI_26395' => 'sgi', 'SEGI_29469' => 'sgi', 'SEGI_34771' => 'sgi', 'SEGI_36769' => 'sgi', 'SEGI_37139' => 'sgi', 'SGA_v2.0_scaffold100G29687' => 'sas', 'SGA_v2.0_scaffold118G32472' => 'sas', 'SGA_v2.0_scaffold14G07051' => 'sas', 'SGA_v2.0_scaffold183G39845' => 'sas', 'SGA_v2.0_scaffold1G00174' => 'sas', 'SGA_v2.0_scaffold22G09714' => 'sas', 'SGA_v2.0_scaffold333G48992' => 'sas', 'SGA_v2.0_scaffold46G17491' => 'sas', 'SGA_v2.0_scaffold49G18294' => 'sas', 'SGA_v2.0_scaffold63G21658' => 'sas', 'SHI01741' => 'shi', 'SHI05771' => 'shi', 'SHI18077' => 'shi', 'SHI20525' => 'shi', 'SHI20527' => 'shi', 'SHI20528' => 'shi', 'SMO172G0185' => 'smo', 'SMO198G0020' => 'smo', 'SMO351G0006' => 'smo', 'SMO356G0118' => 'smo', 'SMO358G0296' => 'smo', 'SMO367G0079' => 'smo', 'SMO367G1277' => 'smo', 'Solyc01g014220.3' => 'sly', 'Solyc01g111770.2' => 'sly', 'Solyc02g078180.3' => 'sly', 'Solyc03g006430.3' => 'sly', 'Solyc03g006456.1' => 'sly', 'Solyc03g079860.2' => 'sly', 'Solyc04g079770.3' => 'sly', 'Solyc05g007430.4' => 'sly', 'Solyc07g063150.3' => 'sly', 'Solyc08g016620.3' => 'sly', 'Solyc09g057590.3' => 'sly', 'Solyc09g057600.1' => 'sly', 'Solyc10g009050.3' => 'sly', 'Solyc11g017420.2' => 'sly', 'Sopen01g053810' => 'spe', 'Sopen02g023040' => 'spe', 'Sopen03g002440' => 'spe', 'Sopen04g033350' => 'spe', 'Sopen05g003310' => 'spe', 'Sopen07g004050' => 'spe', 'Sopen07g031340' => 'spe', 'Sopen08g006990' => 'spe', 'Sopen10g004830' => 'spe', 'Sopen11g009370' => 'spe', 'Sp1g24450' => 'spa', 'Sp1g29670' => 'spa', 'Sp1g39600' => 'spa', 'Sp2g11080' => 'spa', 'Sp2g13970' => 'spa', 'Sp4g16130' => 'spa', 'Sp6g13080' => 'spa', 'Sp7g37270' => 'spa', 'TAR371G0065' => 'tar', 'TAR376G0340' => 'tar', 'TAR376G0435' => 'tar', 'TAR381G0002' => 'tar', 'TAR381G1236' => 'tar', 'TAR624G0055' => 'tar', 'TAR624G0324' => 'tar', 'TAR624G0696' => 'tar', 'TAR624G0906' => 'tar', 'TAR625G0107' => 'tar', 'TAR626G0015' => 'tar', 'TAR626G1356' => 'tar', 'TAR627G0888' => 'tar', 'TAR628G0399' => 'tar', 'TAR628G1327' => 'tar', 'TAR629G2831' => 'tar', 'TAR629G2874' => 'tar', 'TAR633G1432' => 'tar', 'TAR633G2771' => 'tar', 'THA.LOC104803394' => 'tha', 'THA.LOC104805153' => 'tha', 'THA.LOC104806784' => 'tha', 'THA.LOC104810473' => 'tha', 'THA.LOC104813100' => 'tha', 'THA.LOC104814215' => 'tha', 'THA.LOC104815554' => 'tha', 'THA.LOC104820544' => 'tha', 'THA.LOC104824754' => 'tha', 'THA.LOC104827717' => 'tha', 'Thecc.02G031400' => 'tca', 'Thecc.02G055900' => 'tca', 'Thecc.02G350800' => 'tca', 'Thecc.06G150900' => 'tca', 'Thecc.06G186600' => 'tca', 'Thecc.07G089600' => 'tca', 'Thecc.08G020400' => 'tca', 'Thecc.08G182100' => 'tca', 'Thhalv10000873m.g' => 'esa', 'Thhalv10004185m.g' => 'esa', 'Thhalv10006981m.g' => 'esa', 'Thhalv10007204m.g' => 'esa', 'Thhalv10011374m.g' => 'esa', 'Thhalv10013482m.g' => 'esa', 'Thhalv10017801m.g' => 'esa', 'Thhalv10024983m.g' => 'esa', 'TPR.G12072' => 'tpr', 'TPR.G15769' => 'tpr', 'TPR.G16504' => 'tpr', 'TPR.G16506' => 'tpr', 'TPR.G24345' => 'tpr', 'TPR.G26666' => 'tpr', 'TPR.G27320' => 'tpr', 'TPR.G31819' => 'tpr', 'TPR.G38879' => 'tpr', 'TPR.G39015' => 'tpr', 'TPR.G8819' => 'tpr', 'TWI09G0924' => 'twi', 'TWI12G0811' => 'twi', 'TWI12G1294' => 'twi', 'TWI31G0150' => 'twi', 'TWI36G1262' => 'twi', 'TWI38G1287' => 'twi', 'TWI38G1633' => 'twi', 'TWI38G1982' => 'twi', 'TWI39G0116' => 'twi', 'TWI60G1011' => 'twi', 'TWI63G0171' => 'twi', 'TWI73G0839' => 'twi', 'TWI79G1511' => 'twi', 'unitig_0.g915' => 'ugi', 'unitig_0.g916' => 'ugi', 'unitig_21.g20219' => 'ugi', 'unitig_21.g20416' => 'ugi', 'unitig_578.g16132' => 'ugi', 'unitig_578.g16718' => 'ugi', 'unitig_62.g23481' => 'ugi', 'unitig_744.g24535' => 'ugi', 'unitig_749.g13525' => 'ugi', 'vmacro01248' => 'vma', 'vmacro02290' => 'vma', 'vmacro10946' => 'vma', 'vmacro11865' => 'vma', 'vmacro12493' => 'vma', 'vmacro17322' => 'vma', 'vmacro21599' => 'vma', 'vmacro23041' => 'vma', 'VMungo0251G0004' => 'vmu', 'VMungo0251G2639' => 'vmu', 'VMungo0251G2967' => 'vmu', 'VMungo0540G0864' => 'vmu', 'VMungo0540G1569' => 'vmu', 'VMungo0647G0317' => 'vmu', 'VMungo0720G1373' => 'vmu', 'VMungo0720G1508' => 'vmu', 'VMungo1080G0485' => 'vmu', 'VMungo1215G3177' => 'vmu', 'Zm00001eb112600' => 'zma', 'Zm00001eb120220' => 'zma', 'Zm00001eb153240' => 'zma', 'Zm00001eb168880' => 'zma', 'Zm00001eb213920' => 'zma', 'Zm00001eb228280' => 'zma', 'Zm00001eb254580' => 'zma', 'Zm00001eb272180' => 'zma', 'Zm00001eb293190' => 'zma', 'Zm00001eb322930' => 'zma', 'Zm00001eb353360' => 'zma', 'Zm00001eb353390' => 'zma', 'Zm00001eb353430' => 'zma', 'Zm00001eb353440' => 'zma', 'Zm00001eb353780' => 'zma' ), 'gf_id' => 'HOM05D000499', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000499' ), 'data_identifier' => 'HOM05D000499', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000499', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1066', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p29780' => 'bna', 'A02p33180' => 'bna', 'A03p16470' => 'bna', 'A03p66010' => 'bna', 'A04p25970' => 'bna', 'A06p01270' => 'bna', 'A06p46080' => 'bna', 'A07p11400' => 'bna', 'A08p01840' => 'bna', 'A08p08230' => 'bna', 'A08p25740' => 'bna', 'A09p32070' => 'bna', 'A09p37830' => 'bna', 'A09p42840' => 'bna', 'A09p42850' => 'bna', 'Aa31LG10G2060' => 'aar', 'Aa31LG2G7410' => 'aar', 'Aa31LG6G10200' => 'aar', 'Aa31LG6G16680' => 'aar', 'Aa31LG6G8470' => 'aar', 'Aa31LG9G12730' => 'aar', 'Aa31LG9G13680' => 'aar', 'Aa31LG9G14920' => 'aar', 'Aa31LG9G6650' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4977' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5467' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3254' => 'aag', 'Actinidia02578' => 'ach', 'Actinidia07693' => 'ach', 'Actinidia08413' => 'ach', 'Actinidia08414' => 'ach', 'Actinidia15289' => 'ach', 'Actinidia19871' => 'ach', 'Actinidia21475' => 'ach', 'Actinidia22576' => 'ach', 'Actinidia28327' => 'ach', 'Actinidia32491' => 'ach', 'Actinidia39463' => 'ach', 'Actinidia39571' => 'ach', 'Ah.01g013750' => 'amhyb', 'Ah.01g023210' => 'amhyb', 'Ah.04g164850' => 'amhyb', 'Ah.05g178060' => 'amhyb', 'Ah.07g204270' => 'amhyb', 'Ah.07g208480' => 'amhyb', 'Ah.09g237410' => 'amhyb', 'Ah.14g089460' => 'amhyb', 'AL1G41790' => 'aly', 'AL1G49050' => 'aly', 'AL1G53810' => 'aly', 'AL1G61400' => 'aly', 'AL4G18580' => 'aly', 'AL5G12510' => 'aly', 'AL5G12540' => 'aly', 'AL6G43230' => 'aly', 'AL7G10370' => 'aly', 'AL7G19250' => 'aly', 'AL8G12240' => 'aly', 'AL8G18540' => 'aly', 'Aqoxy1G02409' => 'aox', 'Aqoxy2G03993' => 'aox', 'Aqoxy3G03357' => 'aox', 'Aqoxy4G00785' => 'aox', 'Aqoxy5G02598' => 'aox', 'Aqoxy6G00132' => 'aox', 'Aqoxy7G01776' => 'aox', 'Aqoxy7G02316' => 'aox', 'Aqoxy7G03973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.12AFKW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B8730' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27IQR1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3F75VG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3RE0GA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41TCQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.527VTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FIR39' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5W8UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DA38EV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ63HS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H1I32C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HC27T5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4M8AP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7N3CZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9UVDZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LS1NQA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT1D4B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SKC4TM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCFV76' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF9Q1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQWD9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1ZM88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WE07RT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YCK7VH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJE6Q6' => 'arhy', 'AT1G28240' => 'ath', 'AT1G34550' => 'ath', 'AT1G53040' => 'ath', 'AT2G02910' => 'ath', 'AT4G09630' => 'ath', 'AT4G38500' => 'ath', 'AT5G42660' => 'ath', 'AT5G46220' => 'ath', 'ATR0152G026' => 'atr', 'ATR0564G343' => 'atr', 'ATR0706G151' => 'atr', 'ATR0733G207' => 'atr', 'ATR0751G234' => 'atr', 'ATR0807G048' => 'atr', 'ATR1091G084' => 'atr', 'Atru.chr10.1229' => 'acertr', 'Atru.chr10.1230' => 'acertr', 'Atru.chr10.1874' => 'acertr', 'Atru.chr11.1808' => 'acertr', 'Atru.chr13.1795' => 'acertr', 'Atru.chr13.570' => 'acertr', 'Atru.chr2.2608' => 'acertr', 'Atru.chr2.2609' => 'acertr', 'Atru.chr5.3428' => 'acertr', 'Atru.chr8.1171' => 'acertr', 'AUR62004651' => 'cqu', 'AUR62008675' => 'cqu', 'AUR62010014' => 'cqu', 'AUR62013004' => 'cqu', 'AUR62014825' => 'cqu', 'AUR62015015' => 'cqu', 'AUR62015151' => 'cqu', 'AUR62017020' => 'cqu', 'AUR62019422' => 'cqu', 'AUR62023570' => 'cqu', 'AUR62025571' => 'cqu', 'AUR62029098' => 'cqu', 'AUR62033863' => 'cqu', 'AUR62034296' => 'cqu', 'AUR62040075' => 'cqu', 'BcaB02g07334' => 'bca', 'BcaB02g10575' => 'bca', 'BcaB03g12119' => 'bca', 'BcaB03g12120' => 'bca', 'BcaB03g13945' => 'bca', 'BcaB04g17123' => 'bca', 'BcaB04g17867' => 'bca', 'BcaB04g19839' => 'bca', 'BcaB07g30317' => 'bca', 'BcaB07g32432' => 'bca', 'BcaB07g33362' => 'bca', 'BcaB08g36611' => 'bca', 'BcaC01g00028' => 'bca', 'BcaC01g01356' => 'bca', 'BcaC01g02034' => 'bca', 'BcaC01g06051' => 'bca', 'BcaC03g16839' => 'bca', 'BcaC03g17176' => 'bca', 'BcaC05g26829' => 'bca', 'BcaC06g31490' => 'bca', 'BcaC06g35344' => 'bca', 'BcaC06g36570' => 'bca', 'BcaC07g37537' => 'bca', 'BcaC08g43491' => 'bca', 'BcaC08g43773' => 'bca', 'BcaNung00234' => 'bca', 'BcaNung01982' => 'bca', 'BcaNung03707' => 'bca', 'BcaNung06454' => 'bca', 'BolC2t10762H' => 'bol', 'BolC2t11191H' => 'bol', 'BolC3t14322H' => 'bol', 'BolC3t19747H' => 'bol', 'BolC3t21425H' => 'bol', 'BolC4t27800H' => 'bol', 'BolC5t31423H' => 'bol', 'BolC6t35951H' => 'bol', 'BolC6t36282H' => 'bol', 'BolC7t40678H' => 'bol', 'BolC7t40679H' => 'bol', 'BolC7t42222H' => 'bol', 'BolC7t43492H' => 'bol', 'BolC7t46785H' => 'bol', 'BolC8t47853H' => 'bol', 'BolC9t56805H' => 'bol', 'BraA02t08000Z' => 'bra', 'BraA02t08341Z' => 'bra', 'BraA03t10936Z' => 'bra', 'BraA03t15657Z' => 'bra', 'BraA04t18100Z' => 'bra', 'BraA05t20523Z' => 'bra', 'BraA06t23353Z' => 'bra', 'BraA06t27473Z' => 'bra', 'BraA06t27769Z' => 'bra', 'BraA07t28928Z' => 'bra', 'BraA08t32236Z' => 'bra', 'BraA08t32841Z' => 'bra', 'BraA08t34524Z' => 'bra', 'BraA09t38742Z' => 'bra', 'BraA09t39295Z' => 'bra', 'C02p47180' => 'bna', 'C02p50990' => 'bna', 'C03p19360' => 'bna', 'C03p74950' => 'bna', 'C03p91000' => 'bna', 'C04p63260' => 'bna', 'C05p27050' => 'bna', 'C06p08750' => 'bna', 'C06p11490' => 'bna', 'C07p02820' => 'bna', 'C07p17180' => 'bna', 'C07p29440' => 'bna', 'C07p63730' => 'bna', 'C09p39260' => 'bna', 'CAN.G1164.34' => 'can', 'CAN.G1164.39' => 'can', 'CAN.G1530.3' => 'can', 'CAN.G162.61' => 'can', 'CAN.G176.6' => 'can', 'CAN.G289.49' => 'can', 'CAN.G370.21' => 'can', 'CAN.G370.22' => 'can', 'CAN.G371.117' => 'can', 'CAN.G58.37' => 'can', 'CAN.G588.98' => 'can', 'CANSAT21G2266' => 'cansat', 'CANSAT25G2799' => 'cansat', 'CANSAT35G0862' => 'cansat', 'CANSAT35G1704' => 'cansat', 'CANSAT35G1760' => 'cansat', 'CANSAT56G3971' => 'cansat', 'CANSAT56G4116' => 'cansat', 'CANSAT80G1259' => 'cansat', 'CARHR027730' => 'chi', 'CARHR033880' => 'chi', 'CARHR043270' => 'chi', 'CARHR145330' => 'chi', 'CARHR145340' => 'chi', 'CARHR175570' => 'chi', 'CARHR181570' => 'chi', 'CARHR258470' => 'chi', 'CARHR260490' => 'chi', 'CARHR294220' => 'chi', 'Carub.0001s2668' => 'cru', 'Carub.0001s3257' => 'cru', 'Carub.0001s4220' => 'cru', 'Carub.0005s0179' => 'cru', 'Carub.0006s2807' => 'cru', 'Carub.0007s0039' => 'cru', 'Carub.0008s0169' => 'cru', 'Carub.0008s0636' => 'cru', 'Ca_00338_v3' => 'car', 'Ca_00542_v3' => 'car', 'Ca_01844_v3' => 'car', 'Ca_10611_v3' => 'car', 'Ca_13326_v3' => 'car', 'Ca_17944_v3' => 'car', 'Ca_18546_v3' => 'car', 'Ca_24219_v3' => 'car', 'Ca_29972_v3' => 'car', 'CBR_g3681' => 'cbr', 'CBR_g40021' => 'cbr', 'Cc01_g08140' => 'ccan', 'Cc02_g13410' => 'ccan', 'Cc02_g37480' => 'ccan', 'Cc05_g12030' => 'ccan', 'Cc09_g03370' => 'ccan', 'Cc09_g10300' => 'ccan', 'Cc10_g03530' => 'ccan', 'Cc10_g11380' => 'ccan', 'CDE01G0176' => 'cde', 'CDE02G0675' => 'cde', 'CDE02G0942' => 'cde', 'CDE02G1153' => 'cde', 'CDE02G4177' => 'cde', 'CDE04G2117' => 'cde', 'CDE04G2736' => 'cde', 'CDE08G1161' => 'cde', 'CDE09G1238' => 'cde', 'Cfa000467' => 'cfa', 'Cfa000947' => 'cfa', 'Cfa004969' => 'cfa', 'Cfa005284' => 'cfa', 'Cfa008993' => 'cfa', 'Cfa018187' => 'cfa', 'Cfa018454' => 'cfa', 'Cfa020585' => 'cfa', 'Ciclev10000424m.g' => 'ccl', 'Ciclev10003605m.g' => 'ccl', 'Ciclev10007828m.g' => 'ccl', 'Ciclev10014620m.g' => 'ccl', 'Ciclev10015169m.g' => 'ccl', 'Ciclev10018291m.g' => 'ccl', 'Ciclev10028256m.g' => 'ccl', 'Ciclev10033822m.g' => 'ccl', 'CiPaw.05G060300' => 'cil', 'CiPaw.05G085000' => 'cil', 'CiPaw.06G083700' => 'cil', 'CiPaw.06G120300' => 'cil', 'CiPaw.09G060500' => 'cil', 'CiPaw.09G123800' => 'cil', 'CiPaw.11G169700' => 'cil', 'CiPaw.12G118300' => 'cil', 'CiPaw.15G071000' => 'cil', 'CiPaw.15G081900' => 'cil', 'ClCG01G024610' => 'cla', 'ClCG03G006070' => 'cla', 'ClCG05G019250' => 'cla', 'ClCG09G009500' => 'cla', 'ClCG11G008200' => 'cla', 'ClCG11G018080' => 'cla', 'COL.COLO4_17373' => 'col', 'COL.COLO4_22994' => 'col', 'COL.COLO4_26389' => 'col', 'COL.COLO4_27170' => 'col', 'COL.COLO4_31074' => 'col', 'COL.COLO4_31465' => 'col', 'COL.COLO4_36438' => 'col', 'COL.COLO4_36439' => 'col', 'Cpa.g.c38781' => 'cpa', 'Cpa.g.sc128.12' => 'cpa', 'Cpa.g.sc166.7' => 'cpa', 'Cpa.g.sc166.8' => 'cpa', 'Cpa.g.sc20.111' => 'cpa', 'Cpa.g.sc27.31' => 'cpa', 'Cpa.g.sc64.36' => 'cpa', 'Cpa.g.sc64.37' => 'cpa', 'Cpa.g.sc66.49' => 'cpa', 'Cpa.g.sc80.64' => 'cpa', 'CsaV3_1G012320' => 'csa', 'CsaV3_2G008480' => 'csa', 'CsaV3_2G033450' => 'csa', 'CsaV3_3G044830' => 'csa', 'CsaV3_4G033710' => 'csa', 'CsaV3_6G051730' => 'csa', 'CsaV3_7G025350' => 'csa', 'CSS0001067' => 'camsi', 'CSS0005996' => 'camsi', 'CSS0006590' => 'camsi', 'CSS0009673' => 'camsi', 'CSS0010201' => 'camsi', 'CSS0010549' => 'camsi', 'CSS0011364' => 'camsi', 'CSS0014473' => 'camsi', 'CSS0014961' => 'camsi', 'CSS0020191' => 'camsi', 'CSS0021165' => 'camsi', 'CSS0022306' => 'camsi', 'CSS0030591' => 'camsi', 'CSS0030696' => 'camsi', 'CSS0032653' => 'camsi', 'CSS0037487' => 'camsi', 'CSS0041102' => 'camsi', 'CSS0041261' => 'camsi', 'CSS0046246' => 'camsi', 'CSS0049256' => 'camsi', 'DCAR_004075' => 'dca', 'DCAR_011538' => 'dca', 'DCAR_019553' => 'dca', 'DCAR_020952' => 'dca', 'DCAR_021739' => 'dca', 'DCAR_027407' => 'dca', 'DCAR_027913' => 'dca', 'DCAR_028066' => 'dca', 'Dinv05899' => 'din', 'Dinv07563' => 'din', 'Dinv08010' => 'din', 'Dinv14125' => 'din', 'Dinv20172' => 'din', 'Dinv30743' => 'din', 'Dinv31229' => 'din', 'Dinv34162' => 'din', 'Dinv36028' => 'din', 'Dinv39368' => 'din', 'Dinv40565' => 'din', 'Dinv41706' => 'din', 'Duzib052G0089' => 'dzi', 'Duzib116G0641' => 'dzi', 'Duzib132G0069' => 'dzi', 'Duzib132G1219' => 'dzi', 'Duzib147G0278' => 'dzi', 'Duzib160G0480' => 'dzi', 'Duzib170G0661' => 'dzi', 'Duzib177G0591' => 'dzi', 'Duzib187G1353' => 'dzi', 'Duzib192G0858' => 'dzi', 'Duzib192G0883' => 'dzi', 'Duzib213G0506' => 'dzi', 'Duzib235G0289' => 'dzi', 'Duzib251G0422' => 'dzi', 'ECA232G3898' => 'eca', 'ECA233G5950' => 'eca', 'ECA234G1699' => 'eca', 'ECA234G2421' => 'eca', 'ECA236G0426' => 'eca', 'ECA236G4331' => 'eca', 'ECA248G2573' => 'eca', 'EL10Ac1g00077' => 'bvu', 'EL10Ac1g01746' => 'bvu', 'EL10Ac2g03464' => 'bvu', 'EL10Ac4g08176' => 'bvu', 'EL10Ac7g17521' => 'bvu', 'EL10Ac8g20386' => 'bvu', 'EL10Ac9g21343' => 'bvu', 'EL10Ac9g22688' => 'bvu', 'Eucgr.B03434' => 'egr', 'Eucgr.D00618' => 'egr', 'Eucgr.E02395' => 'egr', 'Eucgr.F01129' => 'egr', 'Eucgr.F02622' => 'egr', 'Eucgr.F04207' => 'egr', 'FAN01G0570' => 'fan', 'FAN03G3351' => 'fan', 'FAN06G3702' => 'fan', 'FAN07G2149' => 'fan', 'FAN10G3758' => 'fan', 'FAN11G1170' => 'fan', 'FAN11G2050' => 'fan', 'FAN11G2724' => 'fan', 'FAN12G1700' => 'fan', 'FAN12G2028' => 'fan', 'FAN15G1160' => 'fan', 'FAN15G3063' => 'fan', 'FAN16G2540' => 'fan', 'FAN16G3077' => 'fan', 'FAN16G3624' => 'fan', 'FAN17G0221' => 'fan', 'FAN20G2492' => 'fan', 'FAN20G2905' => 'fan', 'FAN21G0548' => 'fan', 'FAN21G1300' => 'fan', 'FAN22G0077' => 'fan', 'FAN22G1315' => 'fan', 'FAN24G1280' => 'fan', 'FAN24G1445' => 'fan', 'FAN24G3527' => 'fan', 'FAN25G0464' => 'fan', 'FAN25G2885' => 'fan', 'FAN25G3270' => 'fan', 'FAN27G1101' => 'fan', 'FAN27G2846' => 'fan', 'FAN27G3524' => 'fan', 'FvH4_2g11770' => 'fve', 'FvH4_2g15630' => 'fve', 'FvH4_3g05570' => 'fve', 'FvH4_3g09110' => 'fve', 'FvH4_3g19940' => 'fve', 'FvH4_4g04821' => 'fve', 'FvH4_4g31480' => 'fve', 'FvH4_7g01740' => 'fve', 'Glyma.05G130400' => 'gma', 'Glyma.05G156400' => 'gma', 'Glyma.07G197000' => 'gma', 'Glyma.08G085151' => 'gma', 'Glyma.08G114500' => 'gma', 'Glyma.08G300400' => 'gma', 'Glyma.10G215800' => 'gma', 'Glyma.12G224400' => 'gma', 'Glyma.13G179300' => 'gma', 'Glyma.13G218151' => 'gma', 'Glyma.13G238800' => 'gma', 'Glyma.13G276900' => 'gma', 'Glyma.14G078200' => 'gma', 'Glyma.15G074500' => 'gma', 'Glyma.15G094100' => 'gma', 'Glyma.17G247200' => 'gma', 'Glyma.18G120100' => 'gma', 'Glyma.20G176000' => 'gma', 'Gohir.A01G063600' => 'ghi', 'Gohir.A01G170301' => 'ghi', 'Gohir.A02G060500' => 'ghi', 'Gohir.A05G133850' => 'ghi', 'Gohir.A05G161400' => 'ghi', 'Gohir.A06G012900' => 'ghi', 'Gohir.A06G035901' => 'ghi', 'Gohir.A06G127100' => 'ghi', 'Gohir.A06G210500' => 'ghi', 'Gohir.A08G008650' => 'ghi', 'Gohir.A09G072700' => 'ghi', 'Gohir.A09G088301' => 'ghi', 'Gohir.A10G040600' => 'ghi', 'Gohir.A12G036300' => 'ghi', 'Gohir.A12G143350' => 'ghi', 'Gohir.A12G165500' => 'ghi', 'Gohir.A13G145700' => 'ghi', 'Gohir.D01G050000' => 'ghi', 'Gohir.D01G051366' => 'ghi', 'Gohir.D01G161350' => 'ghi', 'Gohir.D02G065900' => 'ghi', 'Gohir.D05G164200' => 'ghi', 'Gohir.D05G355500' => 'ghi', 'Gohir.D06G010400' => 'ghi', 'Gohir.D06G111250' => 'ghi', 'Gohir.D06G132000' => 'ghi', 'Gohir.D06G210500' => 'ghi', 'Gohir.D07G165675' => 'ghi', 'Gohir.D08G062240' => 'ghi', 'Gohir.D08G086101' => 'ghi', 'Gohir.D08G138060' => 'ghi', 'Gohir.D09G072300' => 'ghi', 'Gohir.D10G041400' => 'ghi', 'Gohir.D11G191020' => 'ghi', 'Gohir.D11G212066' => 'ghi', 'Gohir.D12G036300' => 'ghi', 'Gohir.D12G168600' => 'ghi', 'Gohir.D13G150600' => 'ghi', 'Gorai.001G057300' => 'gra', 'Gorai.002G069900' => 'gra', 'Gorai.002G200000' => 'gra', 'Gorai.003G067600' => 'gra', 'Gorai.005G074800' => 'gra', 'Gorai.006G087300' => 'gra', 'Gorai.008G037500' => 'gra', 'Gorai.008G181400' => 'gra', 'Gorai.009G169400' => 'gra', 'Gorai.009G387900' => 'gra', 'Gorai.010G013300' => 'gra', 'Gorai.010G153800' => 'gra', 'Gorai.010G255800' => 'gra', 'Gorai.011G043700' => 'gra', 'Gorai.011G198900' => 'gra', 'Gorai.013G168400' => 'gra', 'GSVIVG01005212001' => 'vvi', 'GSVIVG01006163001' => 'vvi', 'GSVIVG01009625001' => 'vvi', 'GSVIVG01014338001' => 'vvi', 'GSVIVG01020005001' => 'vvi', 'GSVIVG01021450001' => 'vvi', 'GSVIVG01023975001' => 'vvi', 'GSVIVG01034490001' => 'vvi', 'HanXRQChr04g0112071' => 'han', 'HanXRQChr05g0131151' => 'han', 'HanXRQChr09g0262371' => 'han', 'HanXRQChr09g0268401' => 'han', 'HanXRQChr10g0279241' => 'han', 'HanXRQChr10g0297961' => 'han', 'HanXRQChr11g0326231' => 'han', 'HanXRQChr11g0328471' => 'han', 'HanXRQChr16g0507941' => 'han', 'HanXRQChr17g0560211' => 'han', 'Haze_02108' => 'cav', 'Haze_02428' => 'cav', 'Haze_05593' => 'cav', 'Haze_06448' => 'cav', 'Haze_09427' => 'cav', 'Haze_12022' => 'cav', 'Haze_17612' => 'cav', 'Haze_17928' => 'cav', 'Hma1.2p1_0032F.1_g019250' => 'hma', 'Hma1.2p1_0163F.1_g072690' => 'hma', 'Hma1.2p1_0265F.1_g106710' => 'hma', 'Hma1.2p1_0286F.1_g113970' => 'hma', 'Hma1.2p1_0363F.1_g136640' => 'hma', 'Hma1.2p1_0584F.1_g183470' => 'hma', 'Hma1.2p1_0885F.1_g232570' => 'hma', 'HPP92_006022' => 'vpl', 'HPP92_007320' => 'vpl', 'HPP92_011521' => 'vpl', 'HPP92_019387' => 'vpl', 'HPP92_024038' => 'vpl', 'Hund05891' => 'sun', 'Hund06450' => 'sun', 'Hund12053' => 'sun', 'Hund16800' => 'sun', 'Hund21222' => 'sun', 'Hund22896' => 'sun', 'Hund23746' => 'sun', 'Hund27083' => 'sun', 'Lalb_Chr02g0141831' => 'lal', 'Lalb_Chr02g0141841' => 'lal', 'Lalb_Chr05g0220411' => 'lal', 'Lalb_Chr06g0162081' => 'lal', 'Lalb_Chr09g0327651' => 'lal', 'Lalb_Chr13g0295051' => 'lal', 'Lalb_Chr15g0086801' => 'lal', 'Lalb_Chr16g0383781' => 'lal', 'Lalb_Chr16g0383791' => 'lal', 'Lalb_Chr18g0055441' => 'lal', 'Lalb_Chr18g0059611' => 'lal', 'Lalb_Chr20g0109661' => 'lal', 'Lalb_Chr20g0109831' => 'lal', 'Lalb_Chr20g0121871' => 'lal', 'Lalb_Chr22g0355361' => 'lal', 'Lalb_Chr25g0286371' => 'lal', 'Lj1A1187G43' => 'lonja', 'Lj1A1205T50' => 'lonja', 'Lj1A800G33' => 'lonja', 'Lj1C1187T7' => 'lonja', 'Lj1C843T11' => 'lonja', 'Lj1g0010940' => 'lja', 'Lj2A288T69' => 'lonja', 'Lj3g0024276' => 'lja', 'Lj4A47T76' => 'lonja', 'Lj4g0005805' => 'lja', 'Lj4g0006097' => 'lja', 'Lj4g0008528' => 'lja', 'Lj4g0024907' => 'lja', 'Lj5g0012472' => 'lja', 'Lj5g0018648' => 'lja', 'Lj6C789G1' => 'lonja', 'Lj6g0004000' => 'lja', 'Lj7A292G67' => 'lonja', 'Lj7A292T64' => 'lonja', 'Lj9A400T58' => 'lonja', 'Lsat_1_v5_gn_1_126181' => 'lsa', 'Lsat_1_v5_gn_4_123041' => 'lsa', 'Lsat_1_v5_gn_4_133620' => 'lsa', 'Lsat_1_v5_gn_4_53221' => 'lsa', 'Lsat_1_v5_gn_4_71961' => 'lsa', 'Lsat_1_v5_gn_7_105241' => 'lsa', 'Lsat_1_v5_gn_7_21361' => 'lsa', 'Lsat_1_v5_gn_7_28860' => 'lsa', 'Lsat_1_v5_gn_7_31260' => 'lsa', 'Lsat_1_v5_gn_8_52801' => 'lsa', 'Manes.02G191400' => 'mes', 'Manes.03G110100' => 'mes', 'Manes.04G071100' => 'mes', 'Manes.05G100500' => 'mes', 'Manes.05G164700' => 'mes', 'Manes.15G087000' => 'mes', 'Manes.15G121500' => 'mes', 'Manes.16G028300' => 'mes', 'Manes.17G046100' => 'mes', 'Manes.17G069800' => 'mes', 'Manes.18G100500' => 'mes', 'Mapoly0002s0109' => 'mpo', 'Mapoly0024s0007' => 'mpo', 'Mapoly0089s0032' => 'mpo', 'MBI04_g42241_MAGBIO' => 'mbi', 'MBI05_g11988_MAGBIO' => 'mbi', 'MBI05_g35452_MAGBIO' => 'mbi', 'MBI07_g30179_MAGBIO' => 'mbi', 'MBI07_g35859_MAGBIO' => 'mbi', 'MBI07_g35860_MAGBIO' => 'mbi', 'MBI07_g37166_MAGBIO' => 'mbi', 'MBI08_g18172_MAGBIO' => 'mbi', 'MBI09_g08441_MAGBIO' => 'mbi', 'MBI13_g01676_MAGBIO' => 'mbi', 'MBI14_g42955_MAGBIO' => 'mbi', 'MBI16_g13161_MAGBIO' => 'mbi', 'MBI17_g27204_MAGBIO' => 'mbi', 'MBI19_g21595_MAGBIO' => 'mbi', 'MD00G1148400' => 'mdo', 'MD02G1301200' => 'mdo', 'MD03G1227800' => 'mdo', 'MD05G1041100' => 'mdo', 'MD05G1124800' => 'mdo', 'MD05G1284000' => 'mdo', 'MD05G1338800' => 'mdo', 'MD05G1338900' => 'mdo', 'MD07G1022800' => 'mdo', 'MD10G1047500' => 'mdo', 'MD10G1127500' => 'mdo', 'MD10G1262300' => 'mdo', 'MD10G1293800' => 'mdo', 'MD16G1074300' => 'mdo', 'Medtr1g021670' => 'mtr', 'Medtr1g096320' => 'mtr', 'Medtr2g013690' => 'mtr', 'Medtr2g019450' => 'mtr', 'Medtr2g085170' => 'mtr', 'Medtr4g088785' => 'mtr', 'Medtr8g055930' => 'mtr', 'Medtr8g085850' => 'mtr', 'MELO3C002605.2' => 'cme', 'MELO3C003891.2' => 'cme', 'MELO3C004012.2' => 'cme', 'MELO3C007134.2' => 'cme', 'MELO3C008118.2' => 'cme', 'MELO3C016700.2' => 'cme', 'MELO3C024127.2' => 'cme', 'MELO3C033361.2' => 'cme', 'MELO3C033362.2' => 'cme', 'Migut.C00430' => 'egut', 'Migut.C01246' => 'egut', 'Migut.E00101' => 'egut', 'Migut.H01486' => 'egut', 'Migut.H01939' => 'egut', 'Migut.K00360' => 'egut', 'Migut.M00910' => 'egut', 'Migut.M01139' => 'egut', 'Migut.N02677' => 'egut', 'MSTRG.13252' => 'ama', 'MSTRG.14701' => 'ama', 'MSTRG.1521' => 'ama', 'MSTRG.15884' => 'ama', 'MSTRG.16242' => 'ama', 'MSTRG.22285' => 'ama', 'MSTRG.22444' => 'ama', 'MSTRG.2349' => 'ama', 'MSTRG.26308' => 'ama', 'MSTRG.28296' => 'ama', 'MSTRG.9895' => 'ama', 'Nitab4.5_0000110g0060' => 'nta', 'Nitab4.5_0000420g0130' => 'nta', 'Nitab4.5_0000422g0030' => 'nta', 'Nitab4.5_0000560g0180' => 'nta', 'Nitab4.5_0000703g0100' => 'nta', 'Nitab4.5_0000786g0200' => 'nta', 'Nitab4.5_0001336g0020' => 'nta', 'Nitab4.5_0001796g0030' => 'nta', 'Nitab4.5_0003348g0060' => 'nta', 'Nitab4.5_0003698g0040' => 'nta', 'Nitab4.5_0003942g0090' => 'nta', 'Nitab4.5_0004775g0070' => 'nta', 'Nitab4.5_0004864g0030' => 'nta', 'Nitab4.5_0005615g0020' => 'nta', 'Nitab4.5_0009288g0030' => 'nta', 'Nitab4.5_0009341g0010' => 'nta', 'Nitab4.5_0009535g0010' => 'nta', 'Nn1g03995' => 'nnu', 'Nn1g04100' => 'nnu', 'Nn1g06530' => 'nnu', 'Nn3g16404' => 'nnu', 'Nn3g17212' => 'nnu', 'Nn3g20776' => 'nnu', 'Nn3g21923' => 'nnu', 'Nn5g27737' => 'nnu', 'Nn5g29461' => 'nnu', 'Nn7g38355' => 'nnu', 'Nn8g39873' => 'nnu', 'Oeu000548.2' => 'oeu', 'Oeu004672.1' => 'oeu', 'Oeu015605.2' => 'oeu', 'Oeu016092.1' => 'oeu', 'Oeu017879.3' => 'oeu', 'Oeu024910.1' => 'oeu', 'Oeu028965.1' => 'oeu', 'Oeu031269.1' => 'oeu', 'Oeu031270.1' => 'oeu', 'Oeu032535.1' => 'oeu', 'Oeu034151.1' => 'oeu', 'Oeu034152.1' => 'oeu', 'Oeu034588.2' => 'oeu', 'Oeu050846.1' => 'oeu', 'Oeu050849.2' => 'oeu', 'Oeu051063.2' => 'oeu', 'Oeu052368.1' => 'oeu', 'Oeu052370.1' => 'oeu', 'Os01g0210400' => 'osa', 'Os01g0304300' => 'osa', 'Os01g0749100' => 'osa', 'Os02g0745800' => 'osa', 'Os03g0769050' => 'osa', 'Os05g0531500' => 'osa', 'Os06g0724300' => 'osa', 'Os11g0198100' => 'osa', 'Peaxi162Scf00069g01425' => 'pax', 'Peaxi162Scf00280g00811' => 'pax', 'Peaxi162Scf00310g00615' => 'pax', 'Peaxi162Scf00362g00542' => 'pax', 'Peaxi162Scf00461g00310' => 'pax', 'Peaxi162Scf00530g00118' => 'pax', 'Peaxi162Scf00541g00057' => 'pax', 'Peaxi162Scf00661g00017' => 'pax', 'Peaxi162Scf00926g00027' => 'pax', 'Peaxi162Scf01064g00263' => 'pax', 'Peaxi162Scf01211g00135' => 'pax', 'PGR004G2336' => 'pgr', 'PGR042G0327' => 'pgr', 'PGR042G1957' => 'pgr', 'PGR042G2003' => 'pgr', 'PGR042G3929' => 'pgr', 'PGR083G1137' => 'pgr', 'PGR083G1364' => 'pgr', 'PGSC0003DMG400003381' => 'stu', 'PGSC0003DMG400003417' => 'stu', 'PGSC0003DMG400008981' => 'stu', 'PGSC0003DMG400012417' => 'stu', 'PGSC0003DMG400012823' => 'stu', 'PGSC0003DMG400016885' => 'stu', 'PGSC0003DMG400022812' => 'stu', 'PGSC0003DMG400029726' => 'stu', 'PGSC0003DMG401009243' => 'stu', 'PGSC0003DMG401031505' => 'stu', 'PGSC0003DMG402031505' => 'stu', 'Phvul.001G017600' => 'pvu', 'Phvul.002G193500' => 'pvu', 'Phvul.002G228900' => 'pvu', 'Phvul.002G236800' => 'pvu', 'Phvul.003G049500' => 'pvu', 'Phvul.005G072000' => 'pvu', 'Phvul.006G164800' => 'pvu', 'Phvul.006G185100' => 'pvu', 'Phvul.007G090000' => 'pvu', 'Potri.001G399800' => 'ptr', 'Potri.002G149900' => 'ptr', 'Potri.004G044100' => 'ptr', 'Potri.004G177600' => 'ptr', 'Potri.009G138000' => 'ptr', 'Potri.010G094000' => 'ptr', 'Potri.011G053000' => 'ptr', 'Potri.011G119300' => 'ptr', 'Potri.013G113700' => 'ptr', 'Potri.018G107800' => 'ptr', 'Potri.019G084100' => 'ptr', 'Pp3c14_23720' => 'ppa', 'Pp3c16_6340' => 'ppa', 'Pp3c23_13420' => 'ppa', 'Pp3c24_2740' => 'ppa', 'Pp3c25_860' => 'ppa', 'Pp3c8_21750' => 'ppa', 'Prupe.1G273000' => 'ppe', 'Prupe.1G273700' => 'ppe', 'Prupe.1G274100' => 'ppe', 'Prupe.2G023300' => 'ppe', 'Prupe.4G048000' => 'ppe', 'Prupe.4G080400' => 'ppe', 'Prupe.4G181200' => 'ppe', 'Prupe.8G056900' => 'ppe', 'Prupe.8G168700' => 'ppe', 'Psat1g189080' => 'psa', 'Psat1g204760' => 'psa', 'Psat4g175560' => 'psa', 'Psat4g177720' => 'psa', 'Psat5g244240' => 'psa', 'Psat6g010720' => 'psa', 'Psat6g187200' => 'psa', 'Psat7g072040' => 'psa', 'PSO017G3501' => 'pso', 'PSO063G2148' => 'pso', 'PSO063G5608' => 'pso', 'PSO210G6392' => 'pso', 'PSO541G2319' => 'pso', 'PSO541G2836' => 'pso', 'PSO541G4012' => 'pso', 'PSO541G6253' => 'pso', 'PSO675G0580' => 'pso', 'PSO675G0856' => 'pso', 'PSO675G5635' => 'pso', 'PSO675G9157' => 'pso', 'PSO832G1660' => 'pso', 'PSO832G1969' => 'pso', 'QL02p007186' => 'qlo', 'QL02p033904' => 'qlo', 'QL03p064391' => 'qlo', 'QL05p040593' => 'qlo', 'QL05p058242' => 'qlo', 'QL08p021825' => 'qlo', 'QL11p004981' => 'qlo', 'RcHm_v2.0_Chr1g0318301' => 'rch', 'RcHm_v2.0_Chr4g0418501' => 'rch', 'RcHm_v2.0_Chr4g0439971' => 'rch', 'RcHm_v2.0_Chr5g0008541' => 'rch', 'RcHm_v2.0_Chr5g0014101' => 'rch', 'RcHm_v2.0_Chr5g0014131' => 'rch', 'RcHm_v2.0_Chr5g0033621' => 'rch', 'RcHm_v2.0_Chr6g0272041' => 'rch', 'RcHm_v2.0_Chr6g0278831' => 'rch', 'Rhsim02G0130400' => 'rsi', 'Rhsim02G0171100' => 'rsi', 'Rhsim05G0053000' => 'rsi', 'Rhsim05G0053100' => 'rsi', 'Rhsim06G0096500' => 'rsi', 'Rhsim06G0096600' => 'rsi', 'Rhsim06G0199100' => 'rsi', 'Rhsim12G0062300' => 'rsi', 'Rhsim12G0062800' => 'rsi', 'Sabra02G0118600' => 'sbr', 'Sabra04G0027300' => 'sbr', 'Sabra04G0119500' => 'sbr', 'Sabra08G0112500' => 'sbr', 'Sabra11G0036800' => 'sbr', 'Sabra11G0103800' => 'sbr', 'Sabra13G0096300' => 'sbr', 'Sabra16G0262300' => 'sbr', 'Sabra18G0091700' => 'sbr', 'Sabra19G0095400' => 'sbr', 'SalBow6G3080' => 'sbo', 'SalBow7G1157' => 'sbo', 'SalBow7G2123' => 'sbo', 'SalBow7G2285' => 'sbo', 'SalBow7G3537' => 'sbo', 'SalBow8G2947' => 'sbo', 'SalBow8G4463' => 'sbo', 'SalBow8G5466' => 'sbo', 'Sc01g0001750' => 'sci', 'Sc02g0006640' => 'sci', 'Sc02g0006670' => 'sci', 'Sc04g0008220' => 'sci', 'Sc05g0006190' => 'sci', 'Sc08g0002760' => 'sci', 'Sc17g0006170' => 'sci', 'Sc22g0002050' => 'sci', 'Sc23g0001190' => 'sci', 'Sc24g0000980' => 'sci', 'Sed0006245' => 'sed', 'Sed0007543' => 'sed', 'Sed0009411' => 'sed', 'Sed0010765' => 'sed', 'Sed0012944' => 'sed', 'Sed0014682' => 'sed', 'Sed0016174' => 'sed', 'Sed0016796' => 'sed', 'Sed0020317' => 'sed', 'Sed0021467' => 'sed', 'SEGI_01316' => 'sgi', 'SEGI_03374' => 'sgi', 'SEGI_16265' => 'sgi', 'SEGI_18569' => 'sgi', 'SEGI_20351' => 'sgi', 'SEGI_26395' => 'sgi', 'SEGI_29469' => 'sgi', 'SEGI_34771' => 'sgi', 'SEGI_36769' => 'sgi', 'SEGI_37139' => 'sgi', 'SGA_v2.0_scaffold100G29687' => 'sas', 'SGA_v2.0_scaffold118G32472' => 'sas', 'SGA_v2.0_scaffold14G07051' => 'sas', 'SGA_v2.0_scaffold183G39845' => 'sas', 'SGA_v2.0_scaffold1G00174' => 'sas', 'SGA_v2.0_scaffold22G09714' => 'sas', 'SGA_v2.0_scaffold333G48992' => 'sas', 'SGA_v2.0_scaffold46G17491' => 'sas', 'SGA_v2.0_scaffold49G18294' => 'sas', 'SGA_v2.0_scaffold63G21658' => 'sas', 'SHI01741' => 'shi', 'SHI05771' => 'shi', 'SHI18077' => 'shi', 'SHI20525' => 'shi', 'SHI20527' => 'shi', 'SHI20528' => 'shi', 'SMO172G0185' => 'smo', 'SMO198G0020' => 'smo', 'SMO351G0006' => 'smo', 'SMO356G0118' => 'smo', 'SMO358G0296' => 'smo', 'SMO367G0079' => 'smo', 'SMO367G1277' => 'smo', 'Solyc01g014220.3' => 'sly', 'Solyc01g111770.2' => 'sly', 'Solyc02g078180.3' => 'sly', 'Solyc03g006430.3' => 'sly', 'Solyc03g006456.1' => 'sly', 'Solyc03g079860.2' => 'sly', 'Solyc04g079770.3' => 'sly', 'Solyc05g007430.4' => 'sly', 'Solyc07g063150.3' => 'sly', 'Solyc08g016620.3' => 'sly', 'Solyc09g057590.3' => 'sly', 'Solyc09g057600.1' => 'sly', 'Solyc10g009050.3' => 'sly', 'Solyc11g017420.2' => 'sly', 'Sopen01g053810' => 'spe', 'Sopen02g023040' => 'spe', 'Sopen03g002440' => 'spe', 'Sopen04g033350' => 'spe', 'Sopen05g003310' => 'spe', 'Sopen07g004050' => 'spe', 'Sopen07g031340' => 'spe', 'Sopen08g006990' => 'spe', 'Sopen10g004830' => 'spe', 'Sopen11g009370' => 'spe', 'Sp1g24450' => 'spa', 'Sp1g29670' => 'spa', 'Sp1g39600' => 'spa', 'Sp2g11080' => 'spa', 'Sp2g13970' => 'spa', 'Sp4g16130' => 'spa', 'Sp6g13080' => 'spa', 'Sp7g37270' => 'spa', 'TAR371G0065' => 'tar', 'TAR376G0340' => 'tar', 'TAR376G0435' => 'tar', 'TAR381G0002' => 'tar', 'TAR381G1236' => 'tar', 'TAR624G0055' => 'tar', 'TAR624G0324' => 'tar', 'TAR624G0696' => 'tar', 'TAR624G0906' => 'tar', 'TAR625G0107' => 'tar', 'TAR626G0015' => 'tar', 'TAR626G1356' => 'tar', 'TAR627G0888' => 'tar', 'TAR628G0399' => 'tar', 'TAR628G1327' => 'tar', 'TAR629G2831' => 'tar', 'TAR629G2874' => 'tar', 'TAR633G1432' => 'tar', 'TAR633G2771' => 'tar', 'THA.LOC104803394' => 'tha', 'THA.LOC104805153' => 'tha', 'THA.LOC104806784' => 'tha', 'THA.LOC104810473' => 'tha', 'THA.LOC104813100' => 'tha', 'THA.LOC104814215' => 'tha', 'THA.LOC104815554' => 'tha', 'THA.LOC104820544' => 'tha', 'THA.LOC104824754' => 'tha', 'THA.LOC104827717' => 'tha', 'Thecc.02G031400' => 'tca', 'Thecc.02G055900' => 'tca', 'Thecc.02G350800' => 'tca', 'Thecc.06G150900' => 'tca', 'Thecc.06G186600' => 'tca', 'Thecc.07G089600' => 'tca', 'Thecc.08G020400' => 'tca', 'Thecc.08G182100' => 'tca', 'Thhalv10000873m.g' => 'esa', 'Thhalv10004185m.g' => 'esa', 'Thhalv10006981m.g' => 'esa', 'Thhalv10007204m.g' => 'esa', 'Thhalv10011374m.g' => 'esa', 'Thhalv10013482m.g' => 'esa', 'Thhalv10017801m.g' => 'esa', 'Thhalv10024983m.g' => 'esa', 'TPR.G12072' => 'tpr', 'TPR.G15769' => 'tpr', 'TPR.G16504' => 'tpr', 'TPR.G16506' => 'tpr', 'TPR.G24345' => 'tpr', 'TPR.G26666' => 'tpr', 'TPR.G27320' => 'tpr', 'TPR.G31819' => 'tpr', 'TPR.G38879' => 'tpr', 'TPR.G39015' => 'tpr', 'TPR.G8819' => 'tpr', 'TWI09G0924' => 'twi', 'TWI12G0811' => 'twi', 'TWI12G1294' => 'twi', 'TWI31G0150' => 'twi', 'TWI36G1262' => 'twi', 'TWI38G1287' => 'twi', 'TWI38G1633' => 'twi', 'TWI38G1982' => 'twi', 'TWI39G0116' => 'twi', 'TWI60G1011' => 'twi', 'TWI63G0171' => 'twi', 'TWI73G0839' => 'twi', 'TWI79G1511' => 'twi', 'unitig_0.g915' => 'ugi', 'unitig_0.g916' => 'ugi', 'unitig_21.g20219' => 'ugi', 'unitig_21.g20416' => 'ugi', 'unitig_578.g16132' => 'ugi', 'unitig_578.g16718' => 'ugi', 'unitig_62.g23481' => 'ugi', 'unitig_744.g24535' => 'ugi', 'unitig_749.g13525' => 'ugi', 'vmacro01248' => 'vma', 'vmacro02290' => 'vma', 'vmacro10946' => 'vma', 'vmacro11865' => 'vma', 'vmacro12493' => 'vma', 'vmacro17322' => 'vma', 'vmacro21599' => 'vma', 'vmacro23041' => 'vma', 'VMungo0251G0004' => 'vmu', 'VMungo0251G2639' => 'vmu', 'VMungo0251G2967' => 'vmu', 'VMungo0540G0864' => 'vmu', 'VMungo0540G1569' => 'vmu', 'VMungo0647G0317' => 'vmu', 'VMungo0720G1373' => 'vmu', 'VMungo0720G1508' => 'vmu', 'VMungo1080G0485' => 'vmu', 'VMungo1215G3177' => 'vmu', 'Zm00001eb112600' => 'zma', 'Zm00001eb120220' => 'zma', 'Zm00001eb153240' => 'zma', 'Zm00001eb168880' => 'zma', 'Zm00001eb213920' => 'zma', 'Zm00001eb228280' => 'zma', 'Zm00001eb254580' => 'zma', 'Zm00001eb272180' => 'zma', 'Zm00001eb293190' => 'zma', 'Zm00001eb322930' => 'zma', 'Zm00001eb353360' => 'zma', 'Zm00001eb353390' => 'zma', 'Zm00001eb353430' => 'zma', 'Zm00001eb353440' => 'zma', 'Zm00001eb353780' => 'zma' ) $gf_id = 'HOM05D000499' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000499' ) $data_identifier = 'HOM05D000499' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 29, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 12, 'amhyb' => (int) 8, 'aly' => (int) 12, 'aox' => (int) 9, 'arhy' => (int) 26, 'ath' => (int) 8, 'atr' => (int) 7, 'acertr' => (int) 10, 'cqu' => (int) 15, 'bca' => (int) 29, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 11, 'cansat' => (int) 8, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 9, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 8, 'cpa' => (int) 10, 'csa' => (int) 7, 'camsi' => (int) 20, 'dca' => (int) 8, 'din' => (int) 12, 'dzi' => (int) 14, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 6, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 38, 'gra' => (int) 16, 'vvi' => (int) 8, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 5, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 11, 'lja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 11, 'mpo' => (int) 3, 'mbi' => (int) 14, 'mdo' => (int) 14, 'mtr' => (int) 8, 'cme' => (int) 9, 'egut' => (int) 9, 'ama' => (int) 11, 'nta' => (int) 17, 'nnu' => (int) 11, 'oeu' => (int) 18, 'osa' => (int) 8, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 6, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 9, 'rsi' => (int) 9, 'sbr' => (int) 10, 'sbo' => (int) 8, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 10, 'sas' => (int) 10, 'shi' => (int) 6, 'smo' => (int) 7, 'sly' => (int) 14, 'spe' => (int) 10, 'spa' => (int) 8, 'tar' => (int) 19, 'tha' => (int) 10, 'tca' => (int) 8, 'esa' => (int) 8, 'tpr' => (int) 11, 'twi' => (int) 13, 'ugi' => (int) 9, 'vma' => (int) 8, 'vmu' => (int) 10, 'zma' => (int) 15 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb353780' $species_info = array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ) $local_species = 'tha' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000499', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1066', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p29780' => 'bna', 'A02p33180' => 'bna', 'A03p16470' => 'bna', 'A03p66010' => 'bna', 'A04p25970' => 'bna', 'A06p01270' => 'bna', 'A06p46080' => 'bna', 'A07p11400' => 'bna', 'A08p01840' => 'bna', 'A08p08230' => 'bna', 'A08p25740' => 'bna', 'A09p32070' => 'bna', 'A09p37830' => 'bna', 'A09p42840' => 'bna', 'A09p42850' => 'bna', 'Aa31LG10G2060' => 'aar', 'Aa31LG2G7410' => 'aar', 'Aa31LG6G10200' => 'aar', 'Aa31LG6G16680' => 'aar', 'Aa31LG6G8470' => 'aar', 'Aa31LG9G12730' => 'aar', 'Aa31LG9G13680' => 'aar', 'Aa31LG9G14920' => 'aar', 'Aa31LG9G6650' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4977' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5467' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3254' => 'aag', 'Actinidia02578' => 'ach', 'Actinidia07693' => 'ach', 'Actinidia08413' => 'ach', 'Actinidia08414' => 'ach', 'Actinidia15289' => 'ach', 'Actinidia19871' => 'ach', 'Actinidia21475' => 'ach', 'Actinidia22576' => 'ach', 'Actinidia28327' => 'ach', 'Actinidia32491' => 'ach', 'Actinidia39463' => 'ach', 'Actinidia39571' => 'ach', 'Ah.01g013750' => 'amhyb', 'Ah.01g023210' => 'amhyb', 'Ah.04g164850' => 'amhyb', 'Ah.05g178060' => 'amhyb', 'Ah.07g204270' => 'amhyb', 'Ah.07g208480' => 'amhyb', 'Ah.09g237410' => 'amhyb', 'Ah.14g089460' => 'amhyb', 'AL1G41790' => 'aly', 'AL1G49050' => 'aly', 'AL1G53810' => 'aly', 'AL1G61400' => 'aly', 'AL4G18580' => 'aly', 'AL5G12510' => 'aly', 'AL5G12540' => 'aly', 'AL6G43230' => 'aly', 'AL7G10370' => 'aly', 'AL7G19250' => 'aly', 'AL8G12240' => 'aly', 'AL8G18540' => 'aly', 'Aqoxy1G02409' => 'aox', 'Aqoxy2G03993' => 'aox', 'Aqoxy3G03357' => 'aox', 'Aqoxy4G00785' => 'aox', 'Aqoxy5G02598' => 'aox', 'Aqoxy6G00132' => 'aox', 'Aqoxy7G01776' => 'aox', 'Aqoxy7G02316' => 'aox', 'Aqoxy7G03973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.12AFKW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B8730' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27IQR1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3F75VG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3RE0GA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41TCQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.527VTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FIR39' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5W8UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DA38EV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ63HS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H1I32C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HC27T5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4M8AP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7N3CZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9UVDZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LS1NQA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT1D4B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SKC4TM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCFV76' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF9Q1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQWD9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1ZM88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WE07RT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YCK7VH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJE6Q6' => 'arhy', 'AT1G28240' => 'ath', 'AT1G34550' => 'ath', 'AT1G53040' => 'ath', 'AT2G02910' => 'ath', 'AT4G09630' => 'ath', 'AT4G38500' => 'ath', 'AT5G42660' => 'ath', 'AT5G46220' => 'ath', 'ATR0152G026' => 'atr', 'ATR0564G343' => 'atr', 'ATR0706G151' => 'atr', 'ATR0733G207' => 'atr', 'ATR0751G234' => 'atr', 'ATR0807G048' => 'atr', 'ATR1091G084' => 'atr', 'Atru.chr10.1229' => 'acertr', 'Atru.chr10.1230' => 'acertr', 'Atru.chr10.1874' => 'acertr', 'Atru.chr11.1808' => 'acertr', 'Atru.chr13.1795' => 'acertr', 'Atru.chr13.570' => 'acertr', 'Atru.chr2.2608' => 'acertr', 'Atru.chr2.2609' => 'acertr', 'Atru.chr5.3428' => 'acertr', 'Atru.chr8.1171' => 'acertr', 'AUR62004651' => 'cqu', 'AUR62008675' => 'cqu', 'AUR62010014' => 'cqu', 'AUR62013004' => 'cqu', 'AUR62014825' => 'cqu', 'AUR62015015' => 'cqu', 'AUR62015151' => 'cqu', 'AUR62017020' => 'cqu', 'AUR62019422' => 'cqu', 'AUR62023570' => 'cqu', 'AUR62025571' => 'cqu', 'AUR62029098' => 'cqu', 'AUR62033863' => 'cqu', 'AUR62034296' => 'cqu', 'AUR62040075' => 'cqu', 'BcaB02g07334' => 'bca', 'BcaB02g10575' => 'bca', 'BcaB03g12119' => 'bca', 'BcaB03g12120' => 'bca', 'BcaB03g13945' => 'bca', 'BcaB04g17123' => 'bca', 'BcaB04g17867' => 'bca', 'BcaB04g19839' => 'bca', 'BcaB07g30317' => 'bca', 'BcaB07g32432' => 'bca', 'BcaB07g33362' => 'bca', 'BcaB08g36611' => 'bca', 'BcaC01g00028' => 'bca', 'BcaC01g01356' => 'bca', 'BcaC01g02034' => 'bca', 'BcaC01g06051' => 'bca', 'BcaC03g16839' => 'bca', 'BcaC03g17176' => 'bca', 'BcaC05g26829' => 'bca', 'BcaC06g31490' => 'bca', 'BcaC06g35344' => 'bca', 'BcaC06g36570' => 'bca', 'BcaC07g37537' => 'bca', 'BcaC08g43491' => 'bca', 'BcaC08g43773' => 'bca', 'BcaNung00234' => 'bca', 'BcaNung01982' => 'bca', 'BcaNung03707' => 'bca', 'BcaNung06454' => 'bca', 'BolC2t10762H' => 'bol', 'BolC2t11191H' => 'bol', 'BolC3t14322H' => 'bol', 'BolC3t19747H' => 'bol', 'BolC3t21425H' => 'bol', 'BolC4t27800H' => 'bol', 'BolC5t31423H' => 'bol', 'BolC6t35951H' => 'bol', 'BolC6t36282H' => 'bol', 'BolC7t40678H' => 'bol', 'BolC7t40679H' => 'bol', 'BolC7t42222H' => 'bol', 'BolC7t43492H' => 'bol', 'BolC7t46785H' => 'bol', 'BolC8t47853H' => 'bol', 'BolC9t56805H' => 'bol', 'BraA02t08000Z' => 'bra', 'BraA02t08341Z' => 'bra', 'BraA03t10936Z' => 'bra', 'BraA03t15657Z' => 'bra', 'BraA04t18100Z' => 'bra', 'BraA05t20523Z' => 'bra', 'BraA06t23353Z' => 'bra', 'BraA06t27473Z' => 'bra', 'BraA06t27769Z' => 'bra', 'BraA07t28928Z' => 'bra', 'BraA08t32236Z' => 'bra', 'BraA08t32841Z' => 'bra', 'BraA08t34524Z' => 'bra', 'BraA09t38742Z' => 'bra', 'BraA09t39295Z' => 'bra', 'C02p47180' => 'bna', 'C02p50990' => 'bna', 'C03p19360' => 'bna', 'C03p74950' => 'bna', 'C03p91000' => 'bna', 'C04p63260' => 'bna', 'C05p27050' => 'bna', 'C06p08750' => 'bna', 'C06p11490' => 'bna', 'C07p02820' => 'bna', 'C07p17180' => 'bna', 'C07p29440' => 'bna', 'C07p63730' => 'bna', 'C09p39260' => 'bna', 'CAN.G1164.34' => 'can', 'CAN.G1164.39' => 'can', 'CAN.G1530.3' => 'can', 'CAN.G162.61' => 'can', 'CAN.G176.6' => 'can', 'CAN.G289.49' => 'can', 'CAN.G370.21' => 'can', 'CAN.G370.22' => 'can', 'CAN.G371.117' => 'can', 'CAN.G58.37' => 'can', 'CAN.G588.98' => 'can', 'CANSAT21G2266' => 'cansat', 'CANSAT25G2799' => 'cansat', 'CANSAT35G0862' => 'cansat', 'CANSAT35G1704' => 'cansat', 'CANSAT35G1760' => 'cansat', 'CANSAT56G3971' => 'cansat', 'CANSAT56G4116' => 'cansat', 'CANSAT80G1259' => 'cansat', 'CARHR027730' => 'chi', 'CARHR033880' => 'chi', 'CARHR043270' => 'chi', 'CARHR145330' => 'chi', 'CARHR145340' => 'chi', 'CARHR175570' => 'chi', 'CARHR181570' => 'chi', 'CARHR258470' => 'chi', 'CARHR260490' => 'chi', 'CARHR294220' => 'chi', 'Carub.0001s2668' => 'cru', 'Carub.0001s3257' => 'cru', 'Carub.0001s4220' => 'cru', 'Carub.0005s0179' => 'cru', 'Carub.0006s2807' => 'cru', 'Carub.0007s0039' => 'cru', 'Carub.0008s0169' => 'cru', 'Carub.0008s0636' => 'cru', 'Ca_00338_v3' => 'car', 'Ca_00542_v3' => 'car', 'Ca_01844_v3' => 'car', 'Ca_10611_v3' => 'car', 'Ca_13326_v3' => 'car', 'Ca_17944_v3' => 'car', 'Ca_18546_v3' => 'car', 'Ca_24219_v3' => 'car', 'Ca_29972_v3' => 'car', 'CBR_g3681' => 'cbr', 'CBR_g40021' => 'cbr', 'Cc01_g08140' => 'ccan', 'Cc02_g13410' => 'ccan', 'Cc02_g37480' => 'ccan', 'Cc05_g12030' => 'ccan', 'Cc09_g03370' => 'ccan', 'Cc09_g10300' => 'ccan', 'Cc10_g03530' => 'ccan', 'Cc10_g11380' => 'ccan', 'CDE01G0176' => 'cde', 'CDE02G0675' => 'cde', 'CDE02G0942' => 'cde', 'CDE02G1153' => 'cde', 'CDE02G4177' => 'cde', 'CDE04G2117' => 'cde', 'CDE04G2736' => 'cde', 'CDE08G1161' => 'cde', 'CDE09G1238' => 'cde', 'Cfa000467' => 'cfa', 'Cfa000947' => 'cfa', 'Cfa004969' => 'cfa', 'Cfa005284' => 'cfa', 'Cfa008993' => 'cfa', 'Cfa018187' => 'cfa', 'Cfa018454' => 'cfa', 'Cfa020585' => 'cfa', 'Ciclev10000424m.g' => 'ccl', 'Ciclev10003605m.g' => 'ccl', 'Ciclev10007828m.g' => 'ccl', 'Ciclev10014620m.g' => 'ccl', 'Ciclev10015169m.g' => 'ccl', 'Ciclev10018291m.g' => 'ccl', 'Ciclev10028256m.g' => 'ccl', 'Ciclev10033822m.g' => 'ccl', 'CiPaw.05G060300' => 'cil', 'CiPaw.05G085000' => 'cil', 'CiPaw.06G083700' => 'cil', 'CiPaw.06G120300' => 'cil', 'CiPaw.09G060500' => 'cil', 'CiPaw.09G123800' => 'cil', 'CiPaw.11G169700' => 'cil', 'CiPaw.12G118300' => 'cil', 'CiPaw.15G071000' => 'cil', 'CiPaw.15G081900' => 'cil', 'ClCG01G024610' => 'cla', 'ClCG03G006070' => 'cla', 'ClCG05G019250' => 'cla', 'ClCG09G009500' => 'cla', 'ClCG11G008200' => 'cla', 'ClCG11G018080' => 'cla', 'COL.COLO4_17373' => 'col', 'COL.COLO4_22994' => 'col', 'COL.COLO4_26389' => 'col', 'COL.COLO4_27170' => 'col', 'COL.COLO4_31074' => 'col', 'COL.COLO4_31465' => 'col', 'COL.COLO4_36438' => 'col', 'COL.COLO4_36439' => 'col', 'Cpa.g.c38781' => 'cpa', 'Cpa.g.sc128.12' => 'cpa', 'Cpa.g.sc166.7' => 'cpa', 'Cpa.g.sc166.8' => 'cpa', 'Cpa.g.sc20.111' => 'cpa', 'Cpa.g.sc27.31' => 'cpa', 'Cpa.g.sc64.36' => 'cpa', 'Cpa.g.sc64.37' => 'cpa', 'Cpa.g.sc66.49' => 'cpa', 'Cpa.g.sc80.64' => 'cpa', 'CsaV3_1G012320' => 'csa', 'CsaV3_2G008480' => 'csa', 'CsaV3_2G033450' => 'csa', 'CsaV3_3G044830' => 'csa', 'CsaV3_4G033710' => 'csa', 'CsaV3_6G051730' => 'csa', 'CsaV3_7G025350' => 'csa', 'CSS0001067' => 'camsi', 'CSS0005996' => 'camsi', 'CSS0006590' => 'camsi', 'CSS0009673' => 'camsi', 'CSS0010201' => 'camsi', 'CSS0010549' => 'camsi', 'CSS0011364' => 'camsi', 'CSS0014473' => 'camsi', 'CSS0014961' => 'camsi', 'CSS0020191' => 'camsi', 'CSS0021165' => 'camsi', 'CSS0022306' => 'camsi', 'CSS0030591' => 'camsi', 'CSS0030696' => 'camsi', 'CSS0032653' => 'camsi', 'CSS0037487' => 'camsi', 'CSS0041102' => 'camsi', 'CSS0041261' => 'camsi', 'CSS0046246' => 'camsi', 'CSS0049256' => 'camsi', 'DCAR_004075' => 'dca', 'DCAR_011538' => 'dca', 'DCAR_019553' => 'dca', 'DCAR_020952' => 'dca', 'DCAR_021739' => 'dca', 'DCAR_027407' => 'dca', 'DCAR_027913' => 'dca', 'DCAR_028066' => 'dca', 'Dinv05899' => 'din', 'Dinv07563' => 'din', 'Dinv08010' => 'din', 'Dinv14125' => 'din', 'Dinv20172' => 'din', 'Dinv30743' => 'din', 'Dinv31229' => 'din', 'Dinv34162' => 'din', 'Dinv36028' => 'din', 'Dinv39368' => 'din', 'Dinv40565' => 'din', 'Dinv41706' => 'din', 'Duzib052G0089' => 'dzi', 'Duzib116G0641' => 'dzi', 'Duzib132G0069' => 'dzi', 'Duzib132G1219' => 'dzi', 'Duzib147G0278' => 'dzi', 'Duzib160G0480' => 'dzi', 'Duzib170G0661' => 'dzi', 'Duzib177G0591' => 'dzi', 'Duzib187G1353' => 'dzi', 'Duzib192G0858' => 'dzi', 'Duzib192G0883' => 'dzi', 'Duzib213G0506' => 'dzi', 'Duzib235G0289' => 'dzi', 'Duzib251G0422' => 'dzi', 'ECA232G3898' => 'eca', 'ECA233G5950' => 'eca', 'ECA234G1699' => 'eca', 'ECA234G2421' => 'eca', 'ECA236G0426' => 'eca', 'ECA236G4331' => 'eca', 'ECA248G2573' => 'eca', 'EL10Ac1g00077' => 'bvu', 'EL10Ac1g01746' => 'bvu', 'EL10Ac2g03464' => 'bvu', 'EL10Ac4g08176' => 'bvu', 'EL10Ac7g17521' => 'bvu', 'EL10Ac8g20386' => 'bvu', 'EL10Ac9g21343' => 'bvu', 'EL10Ac9g22688' => 'bvu', 'Eucgr.B03434' => 'egr', 'Eucgr.D00618' => 'egr', 'Eucgr.E02395' => 'egr', 'Eucgr.F01129' => 'egr', 'Eucgr.F02622' => 'egr', 'Eucgr.F04207' => 'egr', 'FAN01G0570' => 'fan', 'FAN03G3351' => 'fan', 'FAN06G3702' => 'fan', 'FAN07G2149' => 'fan', 'FAN10G3758' => 'fan', 'FAN11G1170' => 'fan', 'FAN11G2050' => 'fan', 'FAN11G2724' => 'fan', 'FAN12G1700' => 'fan', 'FAN12G2028' => 'fan', 'FAN15G1160' => 'fan', 'FAN15G3063' => 'fan', 'FAN16G2540' => 'fan', 'FAN16G3077' => 'fan', 'FAN16G3624' => 'fan', 'FAN17G0221' => 'fan', 'FAN20G2492' => 'fan', 'FAN20G2905' => 'fan', 'FAN21G0548' => 'fan', 'FAN21G1300' => 'fan', 'FAN22G0077' => 'fan', 'FAN22G1315' => 'fan', 'FAN24G1280' => 'fan', 'FAN24G1445' => 'fan', 'FAN24G3527' => 'fan', 'FAN25G0464' => 'fan', 'FAN25G2885' => 'fan', 'FAN25G3270' => 'fan', 'FAN27G1101' => 'fan', 'FAN27G2846' => 'fan', 'FAN27G3524' => 'fan', 'FvH4_2g11770' => 'fve', 'FvH4_2g15630' => 'fve', 'FvH4_3g05570' => 'fve', 'FvH4_3g09110' => 'fve', 'FvH4_3g19940' => 'fve', 'FvH4_4g04821' => 'fve', 'FvH4_4g31480' => 'fve', 'FvH4_7g01740' => 'fve', 'Glyma.05G130400' => 'gma', 'Glyma.05G156400' => 'gma', 'Glyma.07G197000' => 'gma', 'Glyma.08G085151' => 'gma', 'Glyma.08G114500' => 'gma', 'Glyma.08G300400' => 'gma', 'Glyma.10G215800' => 'gma', 'Glyma.12G224400' => 'gma', 'Glyma.13G179300' => 'gma', 'Glyma.13G218151' => 'gma', 'Glyma.13G238800' => 'gma', 'Glyma.13G276900' => 'gma', 'Glyma.14G078200' => 'gma', 'Glyma.15G074500' => 'gma', 'Glyma.15G094100' => 'gma', 'Glyma.17G247200' => 'gma', 'Glyma.18G120100' => 'gma', 'Glyma.20G176000' => 'gma', 'Gohir.A01G063600' => 'ghi', 'Gohir.A01G170301' => 'ghi', 'Gohir.A02G060500' => 'ghi', 'Gohir.A05G133850' => 'ghi', 'Gohir.A05G161400' => 'ghi', 'Gohir.A06G012900' => 'ghi', 'Gohir.A06G035901' => 'ghi', 'Gohir.A06G127100' => 'ghi', 'Gohir.A06G210500' => 'ghi', 'Gohir.A08G008650' => 'ghi', 'Gohir.A09G072700' => 'ghi', 'Gohir.A09G088301' => 'ghi', 'Gohir.A10G040600' => 'ghi', 'Gohir.A12G036300' => 'ghi', 'Gohir.A12G143350' => 'ghi', 'Gohir.A12G165500' => 'ghi', 'Gohir.A13G145700' => 'ghi', 'Gohir.D01G050000' => 'ghi', 'Gohir.D01G051366' => 'ghi', 'Gohir.D01G161350' => 'ghi', 'Gohir.D02G065900' => 'ghi', 'Gohir.D05G164200' => 'ghi', 'Gohir.D05G355500' => 'ghi', 'Gohir.D06G010400' => 'ghi', 'Gohir.D06G111250' => 'ghi', 'Gohir.D06G132000' => 'ghi', 'Gohir.D06G210500' => 'ghi', 'Gohir.D07G165675' => 'ghi', 'Gohir.D08G062240' => 'ghi', 'Gohir.D08G086101' => 'ghi', 'Gohir.D08G138060' => 'ghi', 'Gohir.D09G072300' => 'ghi', 'Gohir.D10G041400' => 'ghi', 'Gohir.D11G191020' => 'ghi', 'Gohir.D11G212066' => 'ghi', 'Gohir.D12G036300' => 'ghi', 'Gohir.D12G168600' => 'ghi', 'Gohir.D13G150600' => 'ghi', 'Gorai.001G057300' => 'gra', 'Gorai.002G069900' => 'gra', 'Gorai.002G200000' => 'gra', 'Gorai.003G067600' => 'gra', 'Gorai.005G074800' => 'gra', 'Gorai.006G087300' => 'gra', 'Gorai.008G037500' => 'gra', 'Gorai.008G181400' => 'gra', 'Gorai.009G169400' => 'gra', 'Gorai.009G387900' => 'gra', 'Gorai.010G013300' => 'gra', 'Gorai.010G153800' => 'gra', 'Gorai.010G255800' => 'gra', 'Gorai.011G043700' => 'gra', 'Gorai.011G198900' => 'gra', 'Gorai.013G168400' => 'gra', 'GSVIVG01005212001' => 'vvi', 'GSVIVG01006163001' => 'vvi', 'GSVIVG01009625001' => 'vvi', 'GSVIVG01014338001' => 'vvi', 'GSVIVG01020005001' => 'vvi', 'GSVIVG01021450001' => 'vvi', 'GSVIVG01023975001' => 'vvi', 'GSVIVG01034490001' => 'vvi', 'HanXRQChr04g0112071' => 'han', 'HanXRQChr05g0131151' => 'han', 'HanXRQChr09g0262371' => 'han', 'HanXRQChr09g0268401' => 'han', 'HanXRQChr10g0279241' => 'han', 'HanXRQChr10g0297961' => 'han', 'HanXRQChr11g0326231' => 'han', 'HanXRQChr11g0328471' => 'han', 'HanXRQChr16g0507941' => 'han', 'HanXRQChr17g0560211' => 'han', 'Haze_02108' => 'cav', 'Haze_02428' => 'cav', 'Haze_05593' => 'cav', 'Haze_06448' => 'cav', 'Haze_09427' => 'cav', 'Haze_12022' => 'cav', 'Haze_17612' => 'cav', 'Haze_17928' => 'cav', 'Hma1.2p1_0032F.1_g019250' => 'hma', 'Hma1.2p1_0163F.1_g072690' => 'hma', 'Hma1.2p1_0265F.1_g106710' => 'hma', 'Hma1.2p1_0286F.1_g113970' => 'hma', 'Hma1.2p1_0363F.1_g136640' => 'hma', 'Hma1.2p1_0584F.1_g183470' => 'hma', 'Hma1.2p1_0885F.1_g232570' => 'hma', 'HPP92_006022' => 'vpl', 'HPP92_007320' => 'vpl', 'HPP92_011521' => 'vpl', 'HPP92_019387' => 'vpl', 'HPP92_024038' => 'vpl', 'Hund05891' => 'sun', 'Hund06450' => 'sun', 'Hund12053' => 'sun', 'Hund16800' => 'sun', 'Hund21222' => 'sun', 'Hund22896' => 'sun', 'Hund23746' => 'sun', 'Hund27083' => 'sun', 'Lalb_Chr02g0141831' => 'lal', 'Lalb_Chr02g0141841' => 'lal', 'Lalb_Chr05g0220411' => 'lal', 'Lalb_Chr06g0162081' => 'lal', 'Lalb_Chr09g0327651' => 'lal', 'Lalb_Chr13g0295051' => 'lal', 'Lalb_Chr15g0086801' => 'lal', 'Lalb_Chr16g0383781' => 'lal', 'Lalb_Chr16g0383791' => 'lal', 'Lalb_Chr18g0055441' => 'lal', 'Lalb_Chr18g0059611' => 'lal', 'Lalb_Chr20g0109661' => 'lal', 'Lalb_Chr20g0109831' => 'lal', 'Lalb_Chr20g0121871' => 'lal', 'Lalb_Chr22g0355361' => 'lal', 'Lalb_Chr25g0286371' => 'lal', 'Lj1A1187G43' => 'lonja', 'Lj1A1205T50' => 'lonja', 'Lj1A800G33' => 'lonja', 'Lj1C1187T7' => 'lonja', 'Lj1C843T11' => 'lonja', 'Lj1g0010940' => 'lja', 'Lj2A288T69' => 'lonja', 'Lj3g0024276' => 'lja', 'Lj4A47T76' => 'lonja', 'Lj4g0005805' => 'lja', 'Lj4g0006097' => 'lja', 'Lj4g0008528' => 'lja', 'Lj4g0024907' => 'lja', 'Lj5g0012472' => 'lja', 'Lj5g0018648' => 'lja', 'Lj6C789G1' => 'lonja', 'Lj6g0004000' => 'lja', 'Lj7A292G67' => 'lonja', 'Lj7A292T64' => 'lonja', 'Lj9A400T58' => 'lonja', 'Lsat_1_v5_gn_1_126181' => 'lsa', 'Lsat_1_v5_gn_4_123041' => 'lsa', 'Lsat_1_v5_gn_4_133620' => 'lsa', 'Lsat_1_v5_gn_4_53221' => 'lsa', 'Lsat_1_v5_gn_4_71961' => 'lsa', 'Lsat_1_v5_gn_7_105241' => 'lsa', 'Lsat_1_v5_gn_7_21361' => 'lsa', 'Lsat_1_v5_gn_7_28860' => 'lsa', 'Lsat_1_v5_gn_7_31260' => 'lsa', 'Lsat_1_v5_gn_8_52801' => 'lsa', 'Manes.02G191400' => 'mes', 'Manes.03G110100' => 'mes', 'Manes.04G071100' => 'mes', 'Manes.05G100500' => 'mes', 'Manes.05G164700' => 'mes', 'Manes.15G087000' => 'mes', 'Manes.15G121500' => 'mes', 'Manes.16G028300' => 'mes', 'Manes.17G046100' => 'mes', 'Manes.17G069800' => 'mes', 'Manes.18G100500' => 'mes', 'Mapoly0002s0109' => 'mpo', 'Mapoly0024s0007' => 'mpo', 'Mapoly0089s0032' => 'mpo', 'MBI04_g42241_MAGBIO' => 'mbi', 'MBI05_g11988_MAGBIO' => 'mbi', 'MBI05_g35452_MAGBIO' => 'mbi', 'MBI07_g30179_MAGBIO' => 'mbi', 'MBI07_g35859_MAGBIO' => 'mbi', 'MBI07_g35860_MAGBIO' => 'mbi', 'MBI07_g37166_MAGBIO' => 'mbi', 'MBI08_g18172_MAGBIO' => 'mbi', 'MBI09_g08441_MAGBIO' => 'mbi', 'MBI13_g01676_MAGBIO' => 'mbi', 'MBI14_g42955_MAGBIO' => 'mbi', 'MBI16_g13161_MAGBIO' => 'mbi', 'MBI17_g27204_MAGBIO' => 'mbi', 'MBI19_g21595_MAGBIO' => 'mbi', 'MD00G1148400' => 'mdo', 'MD02G1301200' => 'mdo', 'MD03G1227800' => 'mdo', 'MD05G1041100' => 'mdo', 'MD05G1124800' => 'mdo', 'MD05G1284000' => 'mdo', 'MD05G1338800' => 'mdo', 'MD05G1338900' => 'mdo', 'MD07G1022800' => 'mdo', 'MD10G1047500' => 'mdo', 'MD10G1127500' => 'mdo', 'MD10G1262300' => 'mdo', 'MD10G1293800' => 'mdo', 'MD16G1074300' => 'mdo', 'Medtr1g021670' => 'mtr', 'Medtr1g096320' => 'mtr', 'Medtr2g013690' => 'mtr', 'Medtr2g019450' => 'mtr', 'Medtr2g085170' => 'mtr', 'Medtr4g088785' => 'mtr', 'Medtr8g055930' => 'mtr', 'Medtr8g085850' => 'mtr', 'MELO3C002605.2' => 'cme', 'MELO3C003891.2' => 'cme', 'MELO3C004012.2' => 'cme', 'MELO3C007134.2' => 'cme', 'MELO3C008118.2' => 'cme', 'MELO3C016700.2' => 'cme', 'MELO3C024127.2' => 'cme', 'MELO3C033361.2' => 'cme', 'MELO3C033362.2' => 'cme', 'Migut.C00430' => 'egut', 'Migut.C01246' => 'egut', 'Migut.E00101' => 'egut', 'Migut.H01486' => 'egut', 'Migut.H01939' => 'egut', 'Migut.K00360' => 'egut', 'Migut.M00910' => 'egut', 'Migut.M01139' => 'egut', 'Migut.N02677' => 'egut', 'MSTRG.13252' => 'ama', 'MSTRG.14701' => 'ama', 'MSTRG.1521' => 'ama', 'MSTRG.15884' => 'ama', 'MSTRG.16242' => 'ama', 'MSTRG.22285' => 'ama', 'MSTRG.22444' => 'ama', 'MSTRG.2349' => 'ama', 'MSTRG.26308' => 'ama', 'MSTRG.28296' => 'ama', 'MSTRG.9895' => 'ama', 'Nitab4.5_0000110g0060' => 'nta', 'Nitab4.5_0000420g0130' => 'nta', 'Nitab4.5_0000422g0030' => 'nta', 'Nitab4.5_0000560g0180' => 'nta', 'Nitab4.5_0000703g0100' => 'nta', 'Nitab4.5_0000786g0200' => 'nta', 'Nitab4.5_0001336g0020' => 'nta', 'Nitab4.5_0001796g0030' => 'nta', 'Nitab4.5_0003348g0060' => 'nta', 'Nitab4.5_0003698g0040' => 'nta', 'Nitab4.5_0003942g0090' => 'nta', 'Nitab4.5_0004775g0070' => 'nta', 'Nitab4.5_0004864g0030' => 'nta', 'Nitab4.5_0005615g0020' => 'nta', 'Nitab4.5_0009288g0030' => 'nta', 'Nitab4.5_0009341g0010' => 'nta', 'Nitab4.5_0009535g0010' => 'nta', 'Nn1g03995' => 'nnu', 'Nn1g04100' => 'nnu', 'Nn1g06530' => 'nnu', 'Nn3g16404' => 'nnu', 'Nn3g17212' => 'nnu', 'Nn3g20776' => 'nnu', 'Nn3g21923' => 'nnu', 'Nn5g27737' => 'nnu', 'Nn5g29461' => 'nnu', 'Nn7g38355' => 'nnu', 'Nn8g39873' => 'nnu', 'Oeu000548.2' => 'oeu', 'Oeu004672.1' => 'oeu', 'Oeu015605.2' => 'oeu', 'Oeu016092.1' => 'oeu', 'Oeu017879.3' => 'oeu', 'Oeu024910.1' => 'oeu', 'Oeu028965.1' => 'oeu', 'Oeu031269.1' => 'oeu', 'Oeu031270.1' => 'oeu', 'Oeu032535.1' => 'oeu', 'Oeu034151.1' => 'oeu', 'Oeu034152.1' => 'oeu', 'Oeu034588.2' => 'oeu', 'Oeu050846.1' => 'oeu', 'Oeu050849.2' => 'oeu', 'Oeu051063.2' => 'oeu', 'Oeu052368.1' => 'oeu', 'Oeu052370.1' => 'oeu', 'Os01g0210400' => 'osa', 'Os01g0304300' => 'osa', 'Os01g0749100' => 'osa', 'Os02g0745800' => 'osa', 'Os03g0769050' => 'osa', 'Os05g0531500' => 'osa', 'Os06g0724300' => 'osa', 'Os11g0198100' => 'osa', 'Peaxi162Scf00069g01425' => 'pax', 'Peaxi162Scf00280g00811' => 'pax', 'Peaxi162Scf00310g00615' => 'pax', 'Peaxi162Scf00362g00542' => 'pax', 'Peaxi162Scf00461g00310' => 'pax', 'Peaxi162Scf00530g00118' => 'pax', 'Peaxi162Scf00541g00057' => 'pax', 'Peaxi162Scf00661g00017' => 'pax', 'Peaxi162Scf00926g00027' => 'pax', 'Peaxi162Scf01064g00263' => 'pax', 'Peaxi162Scf01211g00135' => 'pax', 'PGR004G2336' => 'pgr', 'PGR042G0327' => 'pgr', 'PGR042G1957' => 'pgr', 'PGR042G2003' => 'pgr', 'PGR042G3929' => 'pgr', 'PGR083G1137' => 'pgr', 'PGR083G1364' => 'pgr', 'PGSC0003DMG400003381' => 'stu', 'PGSC0003DMG400003417' => 'stu', 'PGSC0003DMG400008981' => 'stu', 'PGSC0003DMG400012417' => 'stu', 'PGSC0003DMG400012823' => 'stu', 'PGSC0003DMG400016885' => 'stu', 'PGSC0003DMG400022812' => 'stu', 'PGSC0003DMG400029726' => 'stu', 'PGSC0003DMG401009243' => 'stu', 'PGSC0003DMG401031505' => 'stu', 'PGSC0003DMG402031505' => 'stu', 'Phvul.001G017600' => 'pvu', 'Phvul.002G193500' => 'pvu', 'Phvul.002G228900' => 'pvu', 'Phvul.002G236800' => 'pvu', 'Phvul.003G049500' => 'pvu', 'Phvul.005G072000' => 'pvu', 'Phvul.006G164800' => 'pvu', 'Phvul.006G185100' => 'pvu', 'Phvul.007G090000' => 'pvu', 'Potri.001G399800' => 'ptr', 'Potri.002G149900' => 'ptr', 'Potri.004G044100' => 'ptr', 'Potri.004G177600' => 'ptr', 'Potri.009G138000' => 'ptr', 'Potri.010G094000' => 'ptr', 'Potri.011G053000' => 'ptr', 'Potri.011G119300' => 'ptr', 'Potri.013G113700' => 'ptr', 'Potri.018G107800' => 'ptr', 'Potri.019G084100' => 'ptr', 'Pp3c14_23720' => 'ppa', 'Pp3c16_6340' => 'ppa', 'Pp3c23_13420' => 'ppa', 'Pp3c24_2740' => 'ppa', 'Pp3c25_860' => 'ppa', 'Pp3c8_21750' => 'ppa', 'Prupe.1G273000' => 'ppe', 'Prupe.1G273700' => 'ppe', 'Prupe.1G274100' => 'ppe', 'Prupe.2G023300' => 'ppe', 'Prupe.4G048000' => 'ppe', 'Prupe.4G080400' => 'ppe', 'Prupe.4G181200' => 'ppe', 'Prupe.8G056900' => 'ppe', 'Prupe.8G168700' => 'ppe', 'Psat1g189080' => 'psa', 'Psat1g204760' => 'psa', 'Psat4g175560' => 'psa', 'Psat4g177720' => 'psa', 'Psat5g244240' => 'psa', 'Psat6g010720' => 'psa', 'Psat6g187200' => 'psa', 'Psat7g072040' => 'psa', 'PSO017G3501' => 'pso', 'PSO063G2148' => 'pso', 'PSO063G5608' => 'pso', 'PSO210G6392' => 'pso', 'PSO541G2319' => 'pso', 'PSO541G2836' => 'pso', 'PSO541G4012' => 'pso', 'PSO541G6253' => 'pso', 'PSO675G0580' => 'pso', 'PSO675G0856' => 'pso', 'PSO675G5635' => 'pso', 'PSO675G9157' => 'pso', 'PSO832G1660' => 'pso', 'PSO832G1969' => 'pso', 'QL02p007186' => 'qlo', 'QL02p033904' => 'qlo', 'QL03p064391' => 'qlo', 'QL05p040593' => 'qlo', 'QL05p058242' => 'qlo', 'QL08p021825' => 'qlo', 'QL11p004981' => 'qlo', 'RcHm_v2.0_Chr1g0318301' => 'rch', 'RcHm_v2.0_Chr4g0418501' => 'rch', 'RcHm_v2.0_Chr4g0439971' => 'rch', 'RcHm_v2.0_Chr5g0008541' => 'rch', 'RcHm_v2.0_Chr5g0014101' => 'rch', 'RcHm_v2.0_Chr5g0014131' => 'rch', 'RcHm_v2.0_Chr5g0033621' => 'rch', 'RcHm_v2.0_Chr6g0272041' => 'rch', 'RcHm_v2.0_Chr6g0278831' => 'rch', 'Rhsim02G0130400' => 'rsi', 'Rhsim02G0171100' => 'rsi', 'Rhsim05G0053000' => 'rsi', 'Rhsim05G0053100' => 'rsi', 'Rhsim06G0096500' => 'rsi', 'Rhsim06G0096600' => 'rsi', 'Rhsim06G0199100' => 'rsi', 'Rhsim12G0062300' => 'rsi', 'Rhsim12G0062800' => 'rsi', 'Sabra02G0118600' => 'sbr', 'Sabra04G0027300' => 'sbr', 'Sabra04G0119500' => 'sbr', 'Sabra08G0112500' => 'sbr', 'Sabra11G0036800' => 'sbr', 'Sabra11G0103800' => 'sbr', 'Sabra13G0096300' => 'sbr', 'Sabra16G0262300' => 'sbr', 'Sabra18G0091700' => 'sbr', 'Sabra19G0095400' => 'sbr', 'SalBow6G3080' => 'sbo', 'SalBow7G1157' => 'sbo', 'SalBow7G2123' => 'sbo', 'SalBow7G2285' => 'sbo', 'SalBow7G3537' => 'sbo', 'SalBow8G2947' => 'sbo', 'SalBow8G4463' => 'sbo', 'SalBow8G5466' => 'sbo', 'Sc01g0001750' => 'sci', 'Sc02g0006640' => 'sci', 'Sc02g0006670' => 'sci', 'Sc04g0008220' => 'sci', 'Sc05g0006190' => 'sci', 'Sc08g0002760' => 'sci', 'Sc17g0006170' => 'sci', 'Sc22g0002050' => 'sci', 'Sc23g0001190' => 'sci', 'Sc24g0000980' => 'sci', 'Sed0006245' => 'sed', 'Sed0007543' => 'sed', 'Sed0009411' => 'sed', 'Sed0010765' => 'sed', 'Sed0012944' => 'sed', 'Sed0014682' => 'sed', 'Sed0016174' => 'sed', 'Sed0016796' => 'sed', 'Sed0020317' => 'sed', 'Sed0021467' => 'sed', 'SEGI_01316' => 'sgi', 'SEGI_03374' => 'sgi', 'SEGI_16265' => 'sgi', 'SEGI_18569' => 'sgi', 'SEGI_20351' => 'sgi', 'SEGI_26395' => 'sgi', 'SEGI_29469' => 'sgi', 'SEGI_34771' => 'sgi', 'SEGI_36769' => 'sgi', 'SEGI_37139' => 'sgi', 'SGA_v2.0_scaffold100G29687' => 'sas', 'SGA_v2.0_scaffold118G32472' => 'sas', 'SGA_v2.0_scaffold14G07051' => 'sas', 'SGA_v2.0_scaffold183G39845' => 'sas', 'SGA_v2.0_scaffold1G00174' => 'sas', 'SGA_v2.0_scaffold22G09714' => 'sas', 'SGA_v2.0_scaffold333G48992' => 'sas', 'SGA_v2.0_scaffold46G17491' => 'sas', 'SGA_v2.0_scaffold49G18294' => 'sas', 'SGA_v2.0_scaffold63G21658' => 'sas', 'SHI01741' => 'shi', 'SHI05771' => 'shi', 'SHI18077' => 'shi', 'SHI20525' => 'shi', 'SHI20527' => 'shi', 'SHI20528' => 'shi', 'SMO172G0185' => 'smo', 'SMO198G0020' => 'smo', 'SMO351G0006' => 'smo', 'SMO356G0118' => 'smo', 'SMO358G0296' => 'smo', 'SMO367G0079' => 'smo', 'SMO367G1277' => 'smo', 'Solyc01g014220.3' => 'sly', 'Solyc01g111770.2' => 'sly', 'Solyc02g078180.3' => 'sly', 'Solyc03g006430.3' => 'sly', 'Solyc03g006456.1' => 'sly', 'Solyc03g079860.2' => 'sly', 'Solyc04g079770.3' => 'sly', 'Solyc05g007430.4' => 'sly', 'Solyc07g063150.3' => 'sly', 'Solyc08g016620.3' => 'sly', 'Solyc09g057590.3' => 'sly', 'Solyc09g057600.1' => 'sly', 'Solyc10g009050.3' => 'sly', 'Solyc11g017420.2' => 'sly', 'Sopen01g053810' => 'spe', 'Sopen02g023040' => 'spe', 'Sopen03g002440' => 'spe', 'Sopen04g033350' => 'spe', 'Sopen05g003310' => 'spe', 'Sopen07g004050' => 'spe', 'Sopen07g031340' => 'spe', 'Sopen08g006990' => 'spe', 'Sopen10g004830' => 'spe', 'Sopen11g009370' => 'spe', 'Sp1g24450' => 'spa', 'Sp1g29670' => 'spa', 'Sp1g39600' => 'spa', 'Sp2g11080' => 'spa', 'Sp2g13970' => 'spa', 'Sp4g16130' => 'spa', 'Sp6g13080' => 'spa', 'Sp7g37270' => 'spa', 'TAR371G0065' => 'tar', 'TAR376G0340' => 'tar', 'TAR376G0435' => 'tar', 'TAR381G0002' => 'tar', 'TAR381G1236' => 'tar', 'TAR624G0055' => 'tar', 'TAR624G0324' => 'tar', 'TAR624G0696' => 'tar', 'TAR624G0906' => 'tar', 'TAR625G0107' => 'tar', 'TAR626G0015' => 'tar', 'TAR626G1356' => 'tar', 'TAR627G0888' => 'tar', 'TAR628G0399' => 'tar', 'TAR628G1327' => 'tar', 'TAR629G2831' => 'tar', 'TAR629G2874' => 'tar', 'TAR633G1432' => 'tar', 'TAR633G2771' => 'tar', 'THA.LOC104803394' => 'tha', 'THA.LOC104805153' => 'tha', 'THA.LOC104806784' => 'tha', 'THA.LOC104810473' => 'tha', 'THA.LOC104813100' => 'tha', 'THA.LOC104814215' => 'tha', 'THA.LOC104815554' => 'tha', 'THA.LOC104820544' => 'tha', 'THA.LOC104824754' => 'tha', 'THA.LOC104827717' => 'tha', 'Thecc.02G031400' => 'tca', 'Thecc.02G055900' => 'tca', 'Thecc.02G350800' => 'tca', 'Thecc.06G150900' => 'tca', 'Thecc.06G186600' => 'tca', 'Thecc.07G089600' => 'tca', 'Thecc.08G020400' => 'tca', 'Thecc.08G182100' => 'tca', 'Thhalv10000873m.g' => 'esa', 'Thhalv10004185m.g' => 'esa', 'Thhalv10006981m.g' => 'esa', 'Thhalv10007204m.g' => 'esa', 'Thhalv10011374m.g' => 'esa', 'Thhalv10013482m.g' => 'esa', 'Thhalv10017801m.g' => 'esa', 'Thhalv10024983m.g' => 'esa', 'TPR.G12072' => 'tpr', 'TPR.G15769' => 'tpr', 'TPR.G16504' => 'tpr', 'TPR.G16506' => 'tpr', 'TPR.G24345' => 'tpr', 'TPR.G26666' => 'tpr', 'TPR.G27320' => 'tpr', 'TPR.G31819' => 'tpr', 'TPR.G38879' => 'tpr', 'TPR.G39015' => 'tpr', 'TPR.G8819' => 'tpr', 'TWI09G0924' => 'twi', 'TWI12G0811' => 'twi', 'TWI12G1294' => 'twi', 'TWI31G0150' => 'twi', 'TWI36G1262' => 'twi', 'TWI38G1287' => 'twi', 'TWI38G1633' => 'twi', 'TWI38G1982' => 'twi', 'TWI39G0116' => 'twi', 'TWI60G1011' => 'twi', 'TWI63G0171' => 'twi', 'TWI73G0839' => 'twi', 'TWI79G1511' => 'twi', 'unitig_0.g915' => 'ugi', 'unitig_0.g916' => 'ugi', 'unitig_21.g20219' => 'ugi', 'unitig_21.g20416' => 'ugi', 'unitig_578.g16132' => 'ugi', 'unitig_578.g16718' => 'ugi', 'unitig_62.g23481' => 'ugi', 'unitig_744.g24535' => 'ugi', 'unitig_749.g13525' => 'ugi', 'vmacro01248' => 'vma', 'vmacro02290' => 'vma', 'vmacro10946' => 'vma', 'vmacro11865' => 'vma', 'vmacro12493' => 'vma', 'vmacro17322' => 'vma', 'vmacro21599' => 'vma', 'vmacro23041' => 'vma', 'VMungo0251G0004' => 'vmu', 'VMungo0251G2639' => 'vmu', 'VMungo0251G2967' => 'vmu', 'VMungo0540G0864' => 'vmu', 'VMungo0540G1569' => 'vmu', 'VMungo0647G0317' => 'vmu', 'VMungo0720G1373' => 'vmu', 'VMungo0720G1508' => 'vmu', 'VMungo1080G0485' => 'vmu', 'VMungo1215G3177' => 'vmu', 'Zm00001eb112600' => 'zma', 'Zm00001eb120220' => 'zma', 'Zm00001eb153240' => 'zma', 'Zm00001eb168880' => 'zma', 'Zm00001eb213920' => 'zma', 'Zm00001eb228280' => 'zma', 'Zm00001eb254580' => 'zma', 'Zm00001eb272180' => 'zma', 'Zm00001eb293190' => 'zma', 'Zm00001eb322930' => 'zma', 'Zm00001eb353360' => 'zma', 'Zm00001eb353390' => 'zma', 'Zm00001eb353430' => 'zma', 'Zm00001eb353440' => 'zma', 'Zm00001eb353780' => 'zma' ), 'gf_id' => 'HOM05D000499', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000499' ), 'data_identifier' => 'HOM05D000499', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000499', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1066', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p29780' => 'bna', 'A02p33180' => 'bna', 'A03p16470' => 'bna', 'A03p66010' => 'bna', 'A04p25970' => 'bna', 'A06p01270' => 'bna', 'A06p46080' => 'bna', 'A07p11400' => 'bna', 'A08p01840' => 'bna', 'A08p08230' => 'bna', 'A08p25740' => 'bna', 'A09p32070' => 'bna', 'A09p37830' => 'bna', 'A09p42840' => 'bna', 'A09p42850' => 'bna', 'Aa31LG10G2060' => 'aar', 'Aa31LG2G7410' => 'aar', 'Aa31LG6G10200' => 'aar', 'Aa31LG6G16680' => 'aar', 'Aa31LG6G8470' => 'aar', 'Aa31LG9G12730' => 'aar', 'Aa31LG9G13680' => 'aar', 'Aa31LG9G14920' => 'aar', 'Aa31LG9G6650' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4977' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5467' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3254' => 'aag', 'Actinidia02578' => 'ach', 'Actinidia07693' => 'ach', 'Actinidia08413' => 'ach', 'Actinidia08414' => 'ach', 'Actinidia15289' => 'ach', 'Actinidia19871' => 'ach', 'Actinidia21475' => 'ach', 'Actinidia22576' => 'ach', 'Actinidia28327' => 'ach', 'Actinidia32491' => 'ach', 'Actinidia39463' => 'ach', 'Actinidia39571' => 'ach', 'Ah.01g013750' => 'amhyb', 'Ah.01g023210' => 'amhyb', 'Ah.04g164850' => 'amhyb', 'Ah.05g178060' => 'amhyb', 'Ah.07g204270' => 'amhyb', 'Ah.07g208480' => 'amhyb', 'Ah.09g237410' => 'amhyb', 'Ah.14g089460' => 'amhyb', 'AL1G41790' => 'aly', 'AL1G49050' => 'aly', 'AL1G53810' => 'aly', 'AL1G61400' => 'aly', 'AL4G18580' => 'aly', 'AL5G12510' => 'aly', 'AL5G12540' => 'aly', 'AL6G43230' => 'aly', 'AL7G10370' => 'aly', 'AL7G19250' => 'aly', 'AL8G12240' => 'aly', 'AL8G18540' => 'aly', 'Aqoxy1G02409' => 'aox', 'Aqoxy2G03993' => 'aox', 'Aqoxy3G03357' => 'aox', 'Aqoxy4G00785' => 'aox', 'Aqoxy5G02598' => 'aox', 'Aqoxy6G00132' => 'aox', 'Aqoxy7G01776' => 'aox', 'Aqoxy7G02316' => 'aox', 'Aqoxy7G03973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.12AFKW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B8730' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27IQR1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3F75VG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3RE0GA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41TCQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.527VTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FIR39' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5W8UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DA38EV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ63HS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H1I32C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HC27T5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4M8AP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7N3CZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9UVDZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LS1NQA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT1D4B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SKC4TM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCFV76' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF9Q1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQWD9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1ZM88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WE07RT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YCK7VH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJE6Q6' => 'arhy', 'AT1G28240' => 'ath', 'AT1G34550' => 'ath', 'AT1G53040' => 'ath', 'AT2G02910' => 'ath', 'AT4G09630' => 'ath', 'AT4G38500' => 'ath', 'AT5G42660' => 'ath', 'AT5G46220' => 'ath', 'ATR0152G026' => 'atr', 'ATR0564G343' => 'atr', 'ATR0706G151' => 'atr', 'ATR0733G207' => 'atr', 'ATR0751G234' => 'atr', 'ATR0807G048' => 'atr', 'ATR1091G084' => 'atr', 'Atru.chr10.1229' => 'acertr', 'Atru.chr10.1230' => 'acertr', 'Atru.chr10.1874' => 'acertr', 'Atru.chr11.1808' => 'acertr', 'Atru.chr13.1795' => 'acertr', 'Atru.chr13.570' => 'acertr', 'Atru.chr2.2608' => 'acertr', 'Atru.chr2.2609' => 'acertr', 'Atru.chr5.3428' => 'acertr', 'Atru.chr8.1171' => 'acertr', 'AUR62004651' => 'cqu', 'AUR62008675' => 'cqu', 'AUR62010014' => 'cqu', 'AUR62013004' => 'cqu', 'AUR62014825' => 'cqu', 'AUR62015015' => 'cqu', 'AUR62015151' => 'cqu', 'AUR62017020' => 'cqu', 'AUR62019422' => 'cqu', 'AUR62023570' => 'cqu', 'AUR62025571' => 'cqu', 'AUR62029098' => 'cqu', 'AUR62033863' => 'cqu', 'AUR62034296' => 'cqu', 'AUR62040075' => 'cqu', 'BcaB02g07334' => 'bca', 'BcaB02g10575' => 'bca', 'BcaB03g12119' => 'bca', 'BcaB03g12120' => 'bca', 'BcaB03g13945' => 'bca', 'BcaB04g17123' => 'bca', 'BcaB04g17867' => 'bca', 'BcaB04g19839' => 'bca', 'BcaB07g30317' => 'bca', 'BcaB07g32432' => 'bca', 'BcaB07g33362' => 'bca', 'BcaB08g36611' => 'bca', 'BcaC01g00028' => 'bca', 'BcaC01g01356' => 'bca', 'BcaC01g02034' => 'bca', 'BcaC01g06051' => 'bca', 'BcaC03g16839' => 'bca', 'BcaC03g17176' => 'bca', 'BcaC05g26829' => 'bca', 'BcaC06g31490' => 'bca', 'BcaC06g35344' => 'bca', 'BcaC06g36570' => 'bca', 'BcaC07g37537' => 'bca', 'BcaC08g43491' => 'bca', 'BcaC08g43773' => 'bca', 'BcaNung00234' => 'bca', 'BcaNung01982' => 'bca', 'BcaNung03707' => 'bca', 'BcaNung06454' => 'bca', 'BolC2t10762H' => 'bol', 'BolC2t11191H' => 'bol', 'BolC3t14322H' => 'bol', 'BolC3t19747H' => 'bol', 'BolC3t21425H' => 'bol', 'BolC4t27800H' => 'bol', 'BolC5t31423H' => 'bol', 'BolC6t35951H' => 'bol', 'BolC6t36282H' => 'bol', 'BolC7t40678H' => 'bol', 'BolC7t40679H' => 'bol', 'BolC7t42222H' => 'bol', 'BolC7t43492H' => 'bol', 'BolC7t46785H' => 'bol', 'BolC8t47853H' => 'bol', 'BolC9t56805H' => 'bol', 'BraA02t08000Z' => 'bra', 'BraA02t08341Z' => 'bra', 'BraA03t10936Z' => 'bra', 'BraA03t15657Z' => 'bra', 'BraA04t18100Z' => 'bra', 'BraA05t20523Z' => 'bra', 'BraA06t23353Z' => 'bra', 'BraA06t27473Z' => 'bra', 'BraA06t27769Z' => 'bra', 'BraA07t28928Z' => 'bra', 'BraA08t32236Z' => 'bra', 'BraA08t32841Z' => 'bra', 'BraA08t34524Z' => 'bra', 'BraA09t38742Z' => 'bra', 'BraA09t39295Z' => 'bra', 'C02p47180' => 'bna', 'C02p50990' => 'bna', 'C03p19360' => 'bna', 'C03p74950' => 'bna', 'C03p91000' => 'bna', 'C04p63260' => 'bna', 'C05p27050' => 'bna', 'C06p08750' => 'bna', 'C06p11490' => 'bna', 'C07p02820' => 'bna', 'C07p17180' => 'bna', 'C07p29440' => 'bna', 'C07p63730' => 'bna', 'C09p39260' => 'bna', 'CAN.G1164.34' => 'can', 'CAN.G1164.39' => 'can', 'CAN.G1530.3' => 'can', 'CAN.G162.61' => 'can', 'CAN.G176.6' => 'can', 'CAN.G289.49' => 'can', 'CAN.G370.21' => 'can', 'CAN.G370.22' => 'can', 'CAN.G371.117' => 'can', 'CAN.G58.37' => 'can', 'CAN.G588.98' => 'can', 'CANSAT21G2266' => 'cansat', 'CANSAT25G2799' => 'cansat', 'CANSAT35G0862' => 'cansat', 'CANSAT35G1704' => 'cansat', 'CANSAT35G1760' => 'cansat', 'CANSAT56G3971' => 'cansat', 'CANSAT56G4116' => 'cansat', 'CANSAT80G1259' => 'cansat', 'CARHR027730' => 'chi', 'CARHR033880' => 'chi', 'CARHR043270' => 'chi', 'CARHR145330' => 'chi', 'CARHR145340' => 'chi', 'CARHR175570' => 'chi', 'CARHR181570' => 'chi', 'CARHR258470' => 'chi', 'CARHR260490' => 'chi', 'CARHR294220' => 'chi', 'Carub.0001s2668' => 'cru', 'Carub.0001s3257' => 'cru', 'Carub.0001s4220' => 'cru', 'Carub.0005s0179' => 'cru', 'Carub.0006s2807' => 'cru', 'Carub.0007s0039' => 'cru', 'Carub.0008s0169' => 'cru', 'Carub.0008s0636' => 'cru', 'Ca_00338_v3' => 'car', 'Ca_00542_v3' => 'car', 'Ca_01844_v3' => 'car', 'Ca_10611_v3' => 'car', 'Ca_13326_v3' => 'car', 'Ca_17944_v3' => 'car', 'Ca_18546_v3' => 'car', 'Ca_24219_v3' => 'car', 'Ca_29972_v3' => 'car', 'CBR_g3681' => 'cbr', 'CBR_g40021' => 'cbr', 'Cc01_g08140' => 'ccan', 'Cc02_g13410' => 'ccan', 'Cc02_g37480' => 'ccan', 'Cc05_g12030' => 'ccan', 'Cc09_g03370' => 'ccan', 'Cc09_g10300' => 'ccan', 'Cc10_g03530' => 'ccan', 'Cc10_g11380' => 'ccan', 'CDE01G0176' => 'cde', 'CDE02G0675' => 'cde', 'CDE02G0942' => 'cde', 'CDE02G1153' => 'cde', 'CDE02G4177' => 'cde', 'CDE04G2117' => 'cde', 'CDE04G2736' => 'cde', 'CDE08G1161' => 'cde', 'CDE09G1238' => 'cde', 'Cfa000467' => 'cfa', 'Cfa000947' => 'cfa', 'Cfa004969' => 'cfa', 'Cfa005284' => 'cfa', 'Cfa008993' => 'cfa', 'Cfa018187' => 'cfa', 'Cfa018454' => 'cfa', 'Cfa020585' => 'cfa', 'Ciclev10000424m.g' => 'ccl', 'Ciclev10003605m.g' => 'ccl', 'Ciclev10007828m.g' => 'ccl', 'Ciclev10014620m.g' => 'ccl', 'Ciclev10015169m.g' => 'ccl', 'Ciclev10018291m.g' => 'ccl', 'Ciclev10028256m.g' => 'ccl', 'Ciclev10033822m.g' => 'ccl', 'CiPaw.05G060300' => 'cil', 'CiPaw.05G085000' => 'cil', 'CiPaw.06G083700' => 'cil', 'CiPaw.06G120300' => 'cil', 'CiPaw.09G060500' => 'cil', 'CiPaw.09G123800' => 'cil', 'CiPaw.11G169700' => 'cil', 'CiPaw.12G118300' => 'cil', 'CiPaw.15G071000' => 'cil', 'CiPaw.15G081900' => 'cil', 'ClCG01G024610' => 'cla', 'ClCG03G006070' => 'cla', 'ClCG05G019250' => 'cla', 'ClCG09G009500' => 'cla', 'ClCG11G008200' => 'cla', 'ClCG11G018080' => 'cla', 'COL.COLO4_17373' => 'col', 'COL.COLO4_22994' => 'col', 'COL.COLO4_26389' => 'col', 'COL.COLO4_27170' => 'col', 'COL.COLO4_31074' => 'col', 'COL.COLO4_31465' => 'col', 'COL.COLO4_36438' => 'col', 'COL.COLO4_36439' => 'col', 'Cpa.g.c38781' => 'cpa', 'Cpa.g.sc128.12' => 'cpa', 'Cpa.g.sc166.7' => 'cpa', 'Cpa.g.sc166.8' => 'cpa', 'Cpa.g.sc20.111' => 'cpa', 'Cpa.g.sc27.31' => 'cpa', 'Cpa.g.sc64.36' => 'cpa', 'Cpa.g.sc64.37' => 'cpa', 'Cpa.g.sc66.49' => 'cpa', 'Cpa.g.sc80.64' => 'cpa', 'CsaV3_1G012320' => 'csa', 'CsaV3_2G008480' => 'csa', 'CsaV3_2G033450' => 'csa', 'CsaV3_3G044830' => 'csa', 'CsaV3_4G033710' => 'csa', 'CsaV3_6G051730' => 'csa', 'CsaV3_7G025350' => 'csa', 'CSS0001067' => 'camsi', 'CSS0005996' => 'camsi', 'CSS0006590' => 'camsi', 'CSS0009673' => 'camsi', 'CSS0010201' => 'camsi', 'CSS0010549' => 'camsi', 'CSS0011364' => 'camsi', 'CSS0014473' => 'camsi', 'CSS0014961' => 'camsi', 'CSS0020191' => 'camsi', 'CSS0021165' => 'camsi', 'CSS0022306' => 'camsi', 'CSS0030591' => 'camsi', 'CSS0030696' => 'camsi', 'CSS0032653' => 'camsi', 'CSS0037487' => 'camsi', 'CSS0041102' => 'camsi', 'CSS0041261' => 'camsi', 'CSS0046246' => 'camsi', 'CSS0049256' => 'camsi', 'DCAR_004075' => 'dca', 'DCAR_011538' => 'dca', 'DCAR_019553' => 'dca', 'DCAR_020952' => 'dca', 'DCAR_021739' => 'dca', 'DCAR_027407' => 'dca', 'DCAR_027913' => 'dca', 'DCAR_028066' => 'dca', 'Dinv05899' => 'din', 'Dinv07563' => 'din', 'Dinv08010' => 'din', 'Dinv14125' => 'din', 'Dinv20172' => 'din', 'Dinv30743' => 'din', 'Dinv31229' => 'din', 'Dinv34162' => 'din', 'Dinv36028' => 'din', 'Dinv39368' => 'din', 'Dinv40565' => 'din', 'Dinv41706' => 'din', 'Duzib052G0089' => 'dzi', 'Duzib116G0641' => 'dzi', 'Duzib132G0069' => 'dzi', 'Duzib132G1219' => 'dzi', 'Duzib147G0278' => 'dzi', 'Duzib160G0480' => 'dzi', 'Duzib170G0661' => 'dzi', 'Duzib177G0591' => 'dzi', 'Duzib187G1353' => 'dzi', 'Duzib192G0858' => 'dzi', 'Duzib192G0883' => 'dzi', 'Duzib213G0506' => 'dzi', 'Duzib235G0289' => 'dzi', 'Duzib251G0422' => 'dzi', 'ECA232G3898' => 'eca', 'ECA233G5950' => 'eca', 'ECA234G1699' => 'eca', 'ECA234G2421' => 'eca', 'ECA236G0426' => 'eca', 'ECA236G4331' => 'eca', 'ECA248G2573' => 'eca', 'EL10Ac1g00077' => 'bvu', 'EL10Ac1g01746' => 'bvu', 'EL10Ac2g03464' => 'bvu', 'EL10Ac4g08176' => 'bvu', 'EL10Ac7g17521' => 'bvu', 'EL10Ac8g20386' => 'bvu', 'EL10Ac9g21343' => 'bvu', 'EL10Ac9g22688' => 'bvu', 'Eucgr.B03434' => 'egr', 'Eucgr.D00618' => 'egr', 'Eucgr.E02395' => 'egr', 'Eucgr.F01129' => 'egr', 'Eucgr.F02622' => 'egr', 'Eucgr.F04207' => 'egr', 'FAN01G0570' => 'fan', 'FAN03G3351' => 'fan', 'FAN06G3702' => 'fan', 'FAN07G2149' => 'fan', 'FAN10G3758' => 'fan', 'FAN11G1170' => 'fan', 'FAN11G2050' => 'fan', 'FAN11G2724' => 'fan', 'FAN12G1700' => 'fan', 'FAN12G2028' => 'fan', 'FAN15G1160' => 'fan', 'FAN15G3063' => 'fan', 'FAN16G2540' => 'fan', 'FAN16G3077' => 'fan', 'FAN16G3624' => 'fan', 'FAN17G0221' => 'fan', 'FAN20G2492' => 'fan', 'FAN20G2905' => 'fan', 'FAN21G0548' => 'fan', 'FAN21G1300' => 'fan', 'FAN22G0077' => 'fan', 'FAN22G1315' => 'fan', 'FAN24G1280' => 'fan', 'FAN24G1445' => 'fan', 'FAN24G3527' => 'fan', 'FAN25G0464' => 'fan', 'FAN25G2885' => 'fan', 'FAN25G3270' => 'fan', 'FAN27G1101' => 'fan', 'FAN27G2846' => 'fan', 'FAN27G3524' => 'fan', 'FvH4_2g11770' => 'fve', 'FvH4_2g15630' => 'fve', 'FvH4_3g05570' => 'fve', 'FvH4_3g09110' => 'fve', 'FvH4_3g19940' => 'fve', 'FvH4_4g04821' => 'fve', 'FvH4_4g31480' => 'fve', 'FvH4_7g01740' => 'fve', 'Glyma.05G130400' => 'gma', 'Glyma.05G156400' => 'gma', 'Glyma.07G197000' => 'gma', 'Glyma.08G085151' => 'gma', 'Glyma.08G114500' => 'gma', 'Glyma.08G300400' => 'gma', 'Glyma.10G215800' => 'gma', 'Glyma.12G224400' => 'gma', 'Glyma.13G179300' => 'gma', 'Glyma.13G218151' => 'gma', 'Glyma.13G238800' => 'gma', 'Glyma.13G276900' => 'gma', 'Glyma.14G078200' => 'gma', 'Glyma.15G074500' => 'gma', 'Glyma.15G094100' => 'gma', 'Glyma.17G247200' => 'gma', 'Glyma.18G120100' => 'gma', 'Glyma.20G176000' => 'gma', 'Gohir.A01G063600' => 'ghi', 'Gohir.A01G170301' => 'ghi', 'Gohir.A02G060500' => 'ghi', 'Gohir.A05G133850' => 'ghi', 'Gohir.A05G161400' => 'ghi', 'Gohir.A06G012900' => 'ghi', 'Gohir.A06G035901' => 'ghi', 'Gohir.A06G127100' => 'ghi', 'Gohir.A06G210500' => 'ghi', 'Gohir.A08G008650' => 'ghi', 'Gohir.A09G072700' => 'ghi', 'Gohir.A09G088301' => 'ghi', 'Gohir.A10G040600' => 'ghi', 'Gohir.A12G036300' => 'ghi', 'Gohir.A12G143350' => 'ghi', 'Gohir.A12G165500' => 'ghi', 'Gohir.A13G145700' => 'ghi', 'Gohir.D01G050000' => 'ghi', 'Gohir.D01G051366' => 'ghi', 'Gohir.D01G161350' => 'ghi', 'Gohir.D02G065900' => 'ghi', 'Gohir.D05G164200' => 'ghi', 'Gohir.D05G355500' => 'ghi', 'Gohir.D06G010400' => 'ghi', 'Gohir.D06G111250' => 'ghi', 'Gohir.D06G132000' => 'ghi', 'Gohir.D06G210500' => 'ghi', 'Gohir.D07G165675' => 'ghi', 'Gohir.D08G062240' => 'ghi', 'Gohir.D08G086101' => 'ghi', 'Gohir.D08G138060' => 'ghi', 'Gohir.D09G072300' => 'ghi', 'Gohir.D10G041400' => 'ghi', 'Gohir.D11G191020' => 'ghi', 'Gohir.D11G212066' => 'ghi', 'Gohir.D12G036300' => 'ghi', 'Gohir.D12G168600' => 'ghi', 'Gohir.D13G150600' => 'ghi', 'Gorai.001G057300' => 'gra', 'Gorai.002G069900' => 'gra', 'Gorai.002G200000' => 'gra', 'Gorai.003G067600' => 'gra', 'Gorai.005G074800' => 'gra', 'Gorai.006G087300' => 'gra', 'Gorai.008G037500' => 'gra', 'Gorai.008G181400' => 'gra', 'Gorai.009G169400' => 'gra', 'Gorai.009G387900' => 'gra', 'Gorai.010G013300' => 'gra', 'Gorai.010G153800' => 'gra', 'Gorai.010G255800' => 'gra', 'Gorai.011G043700' => 'gra', 'Gorai.011G198900' => 'gra', 'Gorai.013G168400' => 'gra', 'GSVIVG01005212001' => 'vvi', 'GSVIVG01006163001' => 'vvi', 'GSVIVG01009625001' => 'vvi', 'GSVIVG01014338001' => 'vvi', 'GSVIVG01020005001' => 'vvi', 'GSVIVG01021450001' => 'vvi', 'GSVIVG01023975001' => 'vvi', 'GSVIVG01034490001' => 'vvi', 'HanXRQChr04g0112071' => 'han', 'HanXRQChr05g0131151' => 'han', 'HanXRQChr09g0262371' => 'han', 'HanXRQChr09g0268401' => 'han', 'HanXRQChr10g0279241' => 'han', 'HanXRQChr10g0297961' => 'han', 'HanXRQChr11g0326231' => 'han', 'HanXRQChr11g0328471' => 'han', 'HanXRQChr16g0507941' => 'han', 'HanXRQChr17g0560211' => 'han', 'Haze_02108' => 'cav', 'Haze_02428' => 'cav', 'Haze_05593' => 'cav', 'Haze_06448' => 'cav', 'Haze_09427' => 'cav', 'Haze_12022' => 'cav', 'Haze_17612' => 'cav', 'Haze_17928' => 'cav', 'Hma1.2p1_0032F.1_g019250' => 'hma', 'Hma1.2p1_0163F.1_g072690' => 'hma', 'Hma1.2p1_0265F.1_g106710' => 'hma', 'Hma1.2p1_0286F.1_g113970' => 'hma', 'Hma1.2p1_0363F.1_g136640' => 'hma', 'Hma1.2p1_0584F.1_g183470' => 'hma', 'Hma1.2p1_0885F.1_g232570' => 'hma', 'HPP92_006022' => 'vpl', 'HPP92_007320' => 'vpl', 'HPP92_011521' => 'vpl', 'HPP92_019387' => 'vpl', 'HPP92_024038' => 'vpl', 'Hund05891' => 'sun', 'Hund06450' => 'sun', 'Hund12053' => 'sun', 'Hund16800' => 'sun', 'Hund21222' => 'sun', 'Hund22896' => 'sun', 'Hund23746' => 'sun', 'Hund27083' => 'sun', 'Lalb_Chr02g0141831' => 'lal', 'Lalb_Chr02g0141841' => 'lal', 'Lalb_Chr05g0220411' => 'lal', 'Lalb_Chr06g0162081' => 'lal', 'Lalb_Chr09g0327651' => 'lal', 'Lalb_Chr13g0295051' => 'lal', 'Lalb_Chr15g0086801' => 'lal', 'Lalb_Chr16g0383781' => 'lal', 'Lalb_Chr16g0383791' => 'lal', 'Lalb_Chr18g0055441' => 'lal', 'Lalb_Chr18g0059611' => 'lal', 'Lalb_Chr20g0109661' => 'lal', 'Lalb_Chr20g0109831' => 'lal', 'Lalb_Chr20g0121871' => 'lal', 'Lalb_Chr22g0355361' => 'lal', 'Lalb_Chr25g0286371' => 'lal', 'Lj1A1187G43' => 'lonja', 'Lj1A1205T50' => 'lonja', 'Lj1A800G33' => 'lonja', 'Lj1C1187T7' => 'lonja', 'Lj1C843T11' => 'lonja', 'Lj1g0010940' => 'lja', 'Lj2A288T69' => 'lonja', 'Lj3g0024276' => 'lja', 'Lj4A47T76' => 'lonja', 'Lj4g0005805' => 'lja', 'Lj4g0006097' => 'lja', 'Lj4g0008528' => 'lja', 'Lj4g0024907' => 'lja', 'Lj5g0012472' => 'lja', 'Lj5g0018648' => 'lja', 'Lj6C789G1' => 'lonja', 'Lj6g0004000' => 'lja', 'Lj7A292G67' => 'lonja', 'Lj7A292T64' => 'lonja', 'Lj9A400T58' => 'lonja', 'Lsat_1_v5_gn_1_126181' => 'lsa', 'Lsat_1_v5_gn_4_123041' => 'lsa', 'Lsat_1_v5_gn_4_133620' => 'lsa', 'Lsat_1_v5_gn_4_53221' => 'lsa', 'Lsat_1_v5_gn_4_71961' => 'lsa', 'Lsat_1_v5_gn_7_105241' => 'lsa', 'Lsat_1_v5_gn_7_21361' => 'lsa', 'Lsat_1_v5_gn_7_28860' => 'lsa', 'Lsat_1_v5_gn_7_31260' => 'lsa', 'Lsat_1_v5_gn_8_52801' => 'lsa', 'Manes.02G191400' => 'mes', 'Manes.03G110100' => 'mes', 'Manes.04G071100' => 'mes', 'Manes.05G100500' => 'mes', 'Manes.05G164700' => 'mes', 'Manes.15G087000' => 'mes', 'Manes.15G121500' => 'mes', 'Manes.16G028300' => 'mes', 'Manes.17G046100' => 'mes', 'Manes.17G069800' => 'mes', 'Manes.18G100500' => 'mes', 'Mapoly0002s0109' => 'mpo', 'Mapoly0024s0007' => 'mpo', 'Mapoly0089s0032' => 'mpo', 'MBI04_g42241_MAGBIO' => 'mbi', 'MBI05_g11988_MAGBIO' => 'mbi', 'MBI05_g35452_MAGBIO' => 'mbi', 'MBI07_g30179_MAGBIO' => 'mbi', 'MBI07_g35859_MAGBIO' => 'mbi', 'MBI07_g35860_MAGBIO' => 'mbi', 'MBI07_g37166_MAGBIO' => 'mbi', 'MBI08_g18172_MAGBIO' => 'mbi', 'MBI09_g08441_MAGBIO' => 'mbi', 'MBI13_g01676_MAGBIO' => 'mbi', 'MBI14_g42955_MAGBIO' => 'mbi', 'MBI16_g13161_MAGBIO' => 'mbi', 'MBI17_g27204_MAGBIO' => 'mbi', 'MBI19_g21595_MAGBIO' => 'mbi', 'MD00G1148400' => 'mdo', 'MD02G1301200' => 'mdo', 'MD03G1227800' => 'mdo', 'MD05G1041100' => 'mdo', 'MD05G1124800' => 'mdo', 'MD05G1284000' => 'mdo', 'MD05G1338800' => 'mdo', 'MD05G1338900' => 'mdo', 'MD07G1022800' => 'mdo', 'MD10G1047500' => 'mdo', 'MD10G1127500' => 'mdo', 'MD10G1262300' => 'mdo', 'MD10G1293800' => 'mdo', 'MD16G1074300' => 'mdo', 'Medtr1g021670' => 'mtr', 'Medtr1g096320' => 'mtr', 'Medtr2g013690' => 'mtr', 'Medtr2g019450' => 'mtr', 'Medtr2g085170' => 'mtr', 'Medtr4g088785' => 'mtr', 'Medtr8g055930' => 'mtr', 'Medtr8g085850' => 'mtr', 'MELO3C002605.2' => 'cme', 'MELO3C003891.2' => 'cme', 'MELO3C004012.2' => 'cme', 'MELO3C007134.2' => 'cme', 'MELO3C008118.2' => 'cme', 'MELO3C016700.2' => 'cme', 'MELO3C024127.2' => 'cme', 'MELO3C033361.2' => 'cme', 'MELO3C033362.2' => 'cme', 'Migut.C00430' => 'egut', 'Migut.C01246' => 'egut', 'Migut.E00101' => 'egut', 'Migut.H01486' => 'egut', 'Migut.H01939' => 'egut', 'Migut.K00360' => 'egut', 'Migut.M00910' => 'egut', 'Migut.M01139' => 'egut', 'Migut.N02677' => 'egut', 'MSTRG.13252' => 'ama', 'MSTRG.14701' => 'ama', 'MSTRG.1521' => 'ama', 'MSTRG.15884' => 'ama', 'MSTRG.16242' => 'ama', 'MSTRG.22285' => 'ama', 'MSTRG.22444' => 'ama', 'MSTRG.2349' => 'ama', 'MSTRG.26308' => 'ama', 'MSTRG.28296' => 'ama', 'MSTRG.9895' => 'ama', 'Nitab4.5_0000110g0060' => 'nta', 'Nitab4.5_0000420g0130' => 'nta', 'Nitab4.5_0000422g0030' => 'nta', 'Nitab4.5_0000560g0180' => 'nta', 'Nitab4.5_0000703g0100' => 'nta', 'Nitab4.5_0000786g0200' => 'nta', 'Nitab4.5_0001336g0020' => 'nta', 'Nitab4.5_0001796g0030' => 'nta', 'Nitab4.5_0003348g0060' => 'nta', 'Nitab4.5_0003698g0040' => 'nta', 'Nitab4.5_0003942g0090' => 'nta', 'Nitab4.5_0004775g0070' => 'nta', 'Nitab4.5_0004864g0030' => 'nta', 'Nitab4.5_0005615g0020' => 'nta', 'Nitab4.5_0009288g0030' => 'nta', 'Nitab4.5_0009341g0010' => 'nta', 'Nitab4.5_0009535g0010' => 'nta', 'Nn1g03995' => 'nnu', 'Nn1g04100' => 'nnu', 'Nn1g06530' => 'nnu', 'Nn3g16404' => 'nnu', 'Nn3g17212' => 'nnu', 'Nn3g20776' => 'nnu', 'Nn3g21923' => 'nnu', 'Nn5g27737' => 'nnu', 'Nn5g29461' => 'nnu', 'Nn7g38355' => 'nnu', 'Nn8g39873' => 'nnu', 'Oeu000548.2' => 'oeu', 'Oeu004672.1' => 'oeu', 'Oeu015605.2' => 'oeu', 'Oeu016092.1' => 'oeu', 'Oeu017879.3' => 'oeu', 'Oeu024910.1' => 'oeu', 'Oeu028965.1' => 'oeu', 'Oeu031269.1' => 'oeu', 'Oeu031270.1' => 'oeu', 'Oeu032535.1' => 'oeu', 'Oeu034151.1' => 'oeu', 'Oeu034152.1' => 'oeu', 'Oeu034588.2' => 'oeu', 'Oeu050846.1' => 'oeu', 'Oeu050849.2' => 'oeu', 'Oeu051063.2' => 'oeu', 'Oeu052368.1' => 'oeu', 'Oeu052370.1' => 'oeu', 'Os01g0210400' => 'osa', 'Os01g0304300' => 'osa', 'Os01g0749100' => 'osa', 'Os02g0745800' => 'osa', 'Os03g0769050' => 'osa', 'Os05g0531500' => 'osa', 'Os06g0724300' => 'osa', 'Os11g0198100' => 'osa', 'Peaxi162Scf00069g01425' => 'pax', 'Peaxi162Scf00280g00811' => 'pax', 'Peaxi162Scf00310g00615' => 'pax', 'Peaxi162Scf00362g00542' => 'pax', 'Peaxi162Scf00461g00310' => 'pax', 'Peaxi162Scf00530g00118' => 'pax', 'Peaxi162Scf00541g00057' => 'pax', 'Peaxi162Scf00661g00017' => 'pax', 'Peaxi162Scf00926g00027' => 'pax', 'Peaxi162Scf01064g00263' => 'pax', 'Peaxi162Scf01211g00135' => 'pax', 'PGR004G2336' => 'pgr', 'PGR042G0327' => 'pgr', 'PGR042G1957' => 'pgr', 'PGR042G2003' => 'pgr', 'PGR042G3929' => 'pgr', 'PGR083G1137' => 'pgr', 'PGR083G1364' => 'pgr', 'PGSC0003DMG400003381' => 'stu', 'PGSC0003DMG400003417' => 'stu', 'PGSC0003DMG400008981' => 'stu', 'PGSC0003DMG400012417' => 'stu', 'PGSC0003DMG400012823' => 'stu', 'PGSC0003DMG400016885' => 'stu', 'PGSC0003DMG400022812' => 'stu', 'PGSC0003DMG400029726' => 'stu', 'PGSC0003DMG401009243' => 'stu', 'PGSC0003DMG401031505' => 'stu', 'PGSC0003DMG402031505' => 'stu', 'Phvul.001G017600' => 'pvu', 'Phvul.002G193500' => 'pvu', 'Phvul.002G228900' => 'pvu', 'Phvul.002G236800' => 'pvu', 'Phvul.003G049500' => 'pvu', 'Phvul.005G072000' => 'pvu', 'Phvul.006G164800' => 'pvu', 'Phvul.006G185100' => 'pvu', 'Phvul.007G090000' => 'pvu', 'Potri.001G399800' => 'ptr', 'Potri.002G149900' => 'ptr', 'Potri.004G044100' => 'ptr', 'Potri.004G177600' => 'ptr', 'Potri.009G138000' => 'ptr', 'Potri.010G094000' => 'ptr', 'Potri.011G053000' => 'ptr', 'Potri.011G119300' => 'ptr', 'Potri.013G113700' => 'ptr', 'Potri.018G107800' => 'ptr', 'Potri.019G084100' => 'ptr', 'Pp3c14_23720' => 'ppa', 'Pp3c16_6340' => 'ppa', 'Pp3c23_13420' => 'ppa', 'Pp3c24_2740' => 'ppa', 'Pp3c25_860' => 'ppa', 'Pp3c8_21750' => 'ppa', 'Prupe.1G273000' => 'ppe', 'Prupe.1G273700' => 'ppe', 'Prupe.1G274100' => 'ppe', 'Prupe.2G023300' => 'ppe', 'Prupe.4G048000' => 'ppe', 'Prupe.4G080400' => 'ppe', 'Prupe.4G181200' => 'ppe', 'Prupe.8G056900' => 'ppe', 'Prupe.8G168700' => 'ppe', 'Psat1g189080' => 'psa', 'Psat1g204760' => 'psa', 'Psat4g175560' => 'psa', 'Psat4g177720' => 'psa', 'Psat5g244240' => 'psa', 'Psat6g010720' => 'psa', 'Psat6g187200' => 'psa', 'Psat7g072040' => 'psa', 'PSO017G3501' => 'pso', 'PSO063G2148' => 'pso', 'PSO063G5608' => 'pso', 'PSO210G6392' => 'pso', 'PSO541G2319' => 'pso', 'PSO541G2836' => 'pso', 'PSO541G4012' => 'pso', 'PSO541G6253' => 'pso', 'PSO675G0580' => 'pso', 'PSO675G0856' => 'pso', 'PSO675G5635' => 'pso', 'PSO675G9157' => 'pso', 'PSO832G1660' => 'pso', 'PSO832G1969' => 'pso', 'QL02p007186' => 'qlo', 'QL02p033904' => 'qlo', 'QL03p064391' => 'qlo', 'QL05p040593' => 'qlo', 'QL05p058242' => 'qlo', 'QL08p021825' => 'qlo', 'QL11p004981' => 'qlo', 'RcHm_v2.0_Chr1g0318301' => 'rch', 'RcHm_v2.0_Chr4g0418501' => 'rch', 'RcHm_v2.0_Chr4g0439971' => 'rch', 'RcHm_v2.0_Chr5g0008541' => 'rch', 'RcHm_v2.0_Chr5g0014101' => 'rch', 'RcHm_v2.0_Chr5g0014131' => 'rch', 'RcHm_v2.0_Chr5g0033621' => 'rch', 'RcHm_v2.0_Chr6g0272041' => 'rch', 'RcHm_v2.0_Chr6g0278831' => 'rch', 'Rhsim02G0130400' => 'rsi', 'Rhsim02G0171100' => 'rsi', 'Rhsim05G0053000' => 'rsi', 'Rhsim05G0053100' => 'rsi', 'Rhsim06G0096500' => 'rsi', 'Rhsim06G0096600' => 'rsi', 'Rhsim06G0199100' => 'rsi', 'Rhsim12G0062300' => 'rsi', 'Rhsim12G0062800' => 'rsi', 'Sabra02G0118600' => 'sbr', 'Sabra04G0027300' => 'sbr', 'Sabra04G0119500' => 'sbr', 'Sabra08G0112500' => 'sbr', 'Sabra11G0036800' => 'sbr', 'Sabra11G0103800' => 'sbr', 'Sabra13G0096300' => 'sbr', 'Sabra16G0262300' => 'sbr', 'Sabra18G0091700' => 'sbr', 'Sabra19G0095400' => 'sbr', 'SalBow6G3080' => 'sbo', 'SalBow7G1157' => 'sbo', 'SalBow7G2123' => 'sbo', 'SalBow7G2285' => 'sbo', 'SalBow7G3537' => 'sbo', 'SalBow8G2947' => 'sbo', 'SalBow8G4463' => 'sbo', 'SalBow8G5466' => 'sbo', 'Sc01g0001750' => 'sci', 'Sc02g0006640' => 'sci', 'Sc02g0006670' => 'sci', 'Sc04g0008220' => 'sci', 'Sc05g0006190' => 'sci', 'Sc08g0002760' => 'sci', 'Sc17g0006170' => 'sci', 'Sc22g0002050' => 'sci', 'Sc23g0001190' => 'sci', 'Sc24g0000980' => 'sci', 'Sed0006245' => 'sed', 'Sed0007543' => 'sed', 'Sed0009411' => 'sed', 'Sed0010765' => 'sed', 'Sed0012944' => 'sed', 'Sed0014682' => 'sed', 'Sed0016174' => 'sed', 'Sed0016796' => 'sed', 'Sed0020317' => 'sed', 'Sed0021467' => 'sed', 'SEGI_01316' => 'sgi', 'SEGI_03374' => 'sgi', 'SEGI_16265' => 'sgi', 'SEGI_18569' => 'sgi', 'SEGI_20351' => 'sgi', 'SEGI_26395' => 'sgi', 'SEGI_29469' => 'sgi', 'SEGI_34771' => 'sgi', 'SEGI_36769' => 'sgi', 'SEGI_37139' => 'sgi', 'SGA_v2.0_scaffold100G29687' => 'sas', 'SGA_v2.0_scaffold118G32472' => 'sas', 'SGA_v2.0_scaffold14G07051' => 'sas', 'SGA_v2.0_scaffold183G39845' => 'sas', 'SGA_v2.0_scaffold1G00174' => 'sas', 'SGA_v2.0_scaffold22G09714' => 'sas', 'SGA_v2.0_scaffold333G48992' => 'sas', 'SGA_v2.0_scaffold46G17491' => 'sas', 'SGA_v2.0_scaffold49G18294' => 'sas', 'SGA_v2.0_scaffold63G21658' => 'sas', 'SHI01741' => 'shi', 'SHI05771' => 'shi', 'SHI18077' => 'shi', 'SHI20525' => 'shi', 'SHI20527' => 'shi', 'SHI20528' => 'shi', 'SMO172G0185' => 'smo', 'SMO198G0020' => 'smo', 'SMO351G0006' => 'smo', 'SMO356G0118' => 'smo', 'SMO358G0296' => 'smo', 'SMO367G0079' => 'smo', 'SMO367G1277' => 'smo', 'Solyc01g014220.3' => 'sly', 'Solyc01g111770.2' => 'sly', 'Solyc02g078180.3' => 'sly', 'Solyc03g006430.3' => 'sly', 'Solyc03g006456.1' => 'sly', 'Solyc03g079860.2' => 'sly', 'Solyc04g079770.3' => 'sly', 'Solyc05g007430.4' => 'sly', 'Solyc07g063150.3' => 'sly', 'Solyc08g016620.3' => 'sly', 'Solyc09g057590.3' => 'sly', 'Solyc09g057600.1' => 'sly', 'Solyc10g009050.3' => 'sly', 'Solyc11g017420.2' => 'sly', 'Sopen01g053810' => 'spe', 'Sopen02g023040' => 'spe', 'Sopen03g002440' => 'spe', 'Sopen04g033350' => 'spe', 'Sopen05g003310' => 'spe', 'Sopen07g004050' => 'spe', 'Sopen07g031340' => 'spe', 'Sopen08g006990' => 'spe', 'Sopen10g004830' => 'spe', 'Sopen11g009370' => 'spe', 'Sp1g24450' => 'spa', 'Sp1g29670' => 'spa', 'Sp1g39600' => 'spa', 'Sp2g11080' => 'spa', 'Sp2g13970' => 'spa', 'Sp4g16130' => 'spa', 'Sp6g13080' => 'spa', 'Sp7g37270' => 'spa', 'TAR371G0065' => 'tar', 'TAR376G0340' => 'tar', 'TAR376G0435' => 'tar', 'TAR381G0002' => 'tar', 'TAR381G1236' => 'tar', 'TAR624G0055' => 'tar', 'TAR624G0324' => 'tar', 'TAR624G0696' => 'tar', 'TAR624G0906' => 'tar', 'TAR625G0107' => 'tar', 'TAR626G0015' => 'tar', 'TAR626G1356' => 'tar', 'TAR627G0888' => 'tar', 'TAR628G0399' => 'tar', 'TAR628G1327' => 'tar', 'TAR629G2831' => 'tar', 'TAR629G2874' => 'tar', 'TAR633G1432' => 'tar', 'TAR633G2771' => 'tar', 'THA.LOC104803394' => 'tha', 'THA.LOC104805153' => 'tha', 'THA.LOC104806784' => 'tha', 'THA.LOC104810473' => 'tha', 'THA.LOC104813100' => 'tha', 'THA.LOC104814215' => 'tha', 'THA.LOC104815554' => 'tha', 'THA.LOC104820544' => 'tha', 'THA.LOC104824754' => 'tha', 'THA.LOC104827717' => 'tha', 'Thecc.02G031400' => 'tca', 'Thecc.02G055900' => 'tca', 'Thecc.02G350800' => 'tca', 'Thecc.06G150900' => 'tca', 'Thecc.06G186600' => 'tca', 'Thecc.07G089600' => 'tca', 'Thecc.08G020400' => 'tca', 'Thecc.08G182100' => 'tca', 'Thhalv10000873m.g' => 'esa', 'Thhalv10004185m.g' => 'esa', 'Thhalv10006981m.g' => 'esa', 'Thhalv10007204m.g' => 'esa', 'Thhalv10011374m.g' => 'esa', 'Thhalv10013482m.g' => 'esa', 'Thhalv10017801m.g' => 'esa', 'Thhalv10024983m.g' => 'esa', 'TPR.G12072' => 'tpr', 'TPR.G15769' => 'tpr', 'TPR.G16504' => 'tpr', 'TPR.G16506' => 'tpr', 'TPR.G24345' => 'tpr', 'TPR.G26666' => 'tpr', 'TPR.G27320' => 'tpr', 'TPR.G31819' => 'tpr', 'TPR.G38879' => 'tpr', 'TPR.G39015' => 'tpr', 'TPR.G8819' => 'tpr', 'TWI09G0924' => 'twi', 'TWI12G0811' => 'twi', 'TWI12G1294' => 'twi', 'TWI31G0150' => 'twi', 'TWI36G1262' => 'twi', 'TWI38G1287' => 'twi', 'TWI38G1633' => 'twi', 'TWI38G1982' => 'twi', 'TWI39G0116' => 'twi', 'TWI60G1011' => 'twi', 'TWI63G0171' => 'twi', 'TWI73G0839' => 'twi', 'TWI79G1511' => 'twi', 'unitig_0.g915' => 'ugi', 'unitig_0.g916' => 'ugi', 'unitig_21.g20219' => 'ugi', 'unitig_21.g20416' => 'ugi', 'unitig_578.g16132' => 'ugi', 'unitig_578.g16718' => 'ugi', 'unitig_62.g23481' => 'ugi', 'unitig_744.g24535' => 'ugi', 'unitig_749.g13525' => 'ugi', 'vmacro01248' => 'vma', 'vmacro02290' => 'vma', 'vmacro10946' => 'vma', 'vmacro11865' => 'vma', 'vmacro12493' => 'vma', 'vmacro17322' => 'vma', 'vmacro21599' => 'vma', 'vmacro23041' => 'vma', 'VMungo0251G0004' => 'vmu', 'VMungo0251G2639' => 'vmu', 'VMungo0251G2967' => 'vmu', 'VMungo0540G0864' => 'vmu', 'VMungo0540G1569' => 'vmu', 'VMungo0647G0317' => 'vmu', 'VMungo0720G1373' => 'vmu', 'VMungo0720G1508' => 'vmu', 'VMungo1080G0485' => 'vmu', 'VMungo1215G3177' => 'vmu', 'Zm00001eb112600' => 'zma', 'Zm00001eb120220' => 'zma', 'Zm00001eb153240' => 'zma', 'Zm00001eb168880' => 'zma', 'Zm00001eb213920' => 'zma', 'Zm00001eb228280' => 'zma', 'Zm00001eb254580' => 'zma', 'Zm00001eb272180' => 'zma', 'Zm00001eb293190' => 'zma', 'Zm00001eb322930' => 'zma', 'Zm00001eb353360' => 'zma', 'Zm00001eb353390' => 'zma', 'Zm00001eb353430' => 'zma', 'Zm00001eb353440' => 'zma', 'Zm00001eb353780' => 'zma' ) $gf_id = 'HOM05D000499' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000499' ) $data_identifier = 'HOM05D000499' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 29, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 12, 'amhyb' => (int) 8, 'aly' => (int) 12, 'aox' => (int) 9, 'arhy' => (int) 26, 'ath' => (int) 8, 'atr' => (int) 7, 'acertr' => (int) 10, 'cqu' => (int) 15, 'bca' => (int) 29, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 11, 'cansat' => (int) 8, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 9, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 8, 'cpa' => (int) 10, 'csa' => (int) 7, 'camsi' => (int) 20, 'dca' => (int) 8, 'din' => (int) 12, 'dzi' => (int) 14, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 6, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 38, 'gra' => (int) 16, 'vvi' => (int) 8, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 5, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 11, 'lja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 11, 'mpo' => (int) 3, 'mbi' => (int) 14, 'mdo' => (int) 14, 'mtr' => (int) 8, 'cme' => (int) 9, 'egut' => (int) 9, 'ama' => (int) 11, 'nta' => (int) 17, 'nnu' => (int) 11, 'oeu' => (int) 18, 'osa' => (int) 8, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 6, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 9, 'rsi' => (int) 9, 'sbr' => (int) 10, 'sbo' => (int) 8, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 10, 'sas' => (int) 10, 'shi' => (int) 6, 'smo' => (int) 7, 'sly' => (int) 14, 'spe' => (int) 10, 'spa' => (int) 8, 'tar' => (int) 19, 'tha' => (int) 10, 'tca' => (int) 8, 'esa' => (int) 8, 'tpr' => (int) 11, 'twi' => (int) 13, 'ugi' => (int) 9, 'vma' => (int) 8, 'vmu' => (int) 10, 'zma' => (int) 15 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb353780' $species_info = array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ) $local_species = 'tca' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000499', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1066', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p29780' => 'bna', 'A02p33180' => 'bna', 'A03p16470' => 'bna', 'A03p66010' => 'bna', 'A04p25970' => 'bna', 'A06p01270' => 'bna', 'A06p46080' => 'bna', 'A07p11400' => 'bna', 'A08p01840' => 'bna', 'A08p08230' => 'bna', 'A08p25740' => 'bna', 'A09p32070' => 'bna', 'A09p37830' => 'bna', 'A09p42840' => 'bna', 'A09p42850' => 'bna', 'Aa31LG10G2060' => 'aar', 'Aa31LG2G7410' => 'aar', 'Aa31LG6G10200' => 'aar', 'Aa31LG6G16680' => 'aar', 'Aa31LG6G8470' => 'aar', 'Aa31LG9G12730' => 'aar', 'Aa31LG9G13680' => 'aar', 'Aa31LG9G14920' => 'aar', 'Aa31LG9G6650' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4977' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5467' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3254' => 'aag', 'Actinidia02578' => 'ach', 'Actinidia07693' => 'ach', 'Actinidia08413' => 'ach', 'Actinidia08414' => 'ach', 'Actinidia15289' => 'ach', 'Actinidia19871' => 'ach', 'Actinidia21475' => 'ach', 'Actinidia22576' => 'ach', 'Actinidia28327' => 'ach', 'Actinidia32491' => 'ach', 'Actinidia39463' => 'ach', 'Actinidia39571' => 'ach', 'Ah.01g013750' => 'amhyb', 'Ah.01g023210' => 'amhyb', 'Ah.04g164850' => 'amhyb', 'Ah.05g178060' => 'amhyb', 'Ah.07g204270' => 'amhyb', 'Ah.07g208480' => 'amhyb', 'Ah.09g237410' => 'amhyb', 'Ah.14g089460' => 'amhyb', 'AL1G41790' => 'aly', 'AL1G49050' => 'aly', 'AL1G53810' => 'aly', 'AL1G61400' => 'aly', 'AL4G18580' => 'aly', 'AL5G12510' => 'aly', 'AL5G12540' => 'aly', 'AL6G43230' => 'aly', 'AL7G10370' => 'aly', 'AL7G19250' => 'aly', 'AL8G12240' => 'aly', 'AL8G18540' => 'aly', 'Aqoxy1G02409' => 'aox', 'Aqoxy2G03993' => 'aox', 'Aqoxy3G03357' => 'aox', 'Aqoxy4G00785' => 'aox', 'Aqoxy5G02598' => 'aox', 'Aqoxy6G00132' => 'aox', 'Aqoxy7G01776' => 'aox', 'Aqoxy7G02316' => 'aox', 'Aqoxy7G03973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.12AFKW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B8730' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27IQR1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3F75VG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3RE0GA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41TCQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.527VTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FIR39' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5W8UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DA38EV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ63HS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H1I32C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HC27T5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4M8AP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7N3CZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9UVDZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LS1NQA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT1D4B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SKC4TM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCFV76' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF9Q1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQWD9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1ZM88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WE07RT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YCK7VH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJE6Q6' => 'arhy', 'AT1G28240' => 'ath', 'AT1G34550' => 'ath', 'AT1G53040' => 'ath', 'AT2G02910' => 'ath', 'AT4G09630' => 'ath', 'AT4G38500' => 'ath', 'AT5G42660' => 'ath', 'AT5G46220' => 'ath', 'ATR0152G026' => 'atr', 'ATR0564G343' => 'atr', 'ATR0706G151' => 'atr', 'ATR0733G207' => 'atr', 'ATR0751G234' => 'atr', 'ATR0807G048' => 'atr', 'ATR1091G084' => 'atr', 'Atru.chr10.1229' => 'acertr', 'Atru.chr10.1230' => 'acertr', 'Atru.chr10.1874' => 'acertr', 'Atru.chr11.1808' => 'acertr', 'Atru.chr13.1795' => 'acertr', 'Atru.chr13.570' => 'acertr', 'Atru.chr2.2608' => 'acertr', 'Atru.chr2.2609' => 'acertr', 'Atru.chr5.3428' => 'acertr', 'Atru.chr8.1171' => 'acertr', 'AUR62004651' => 'cqu', 'AUR62008675' => 'cqu', 'AUR62010014' => 'cqu', 'AUR62013004' => 'cqu', 'AUR62014825' => 'cqu', 'AUR62015015' => 'cqu', 'AUR62015151' => 'cqu', 'AUR62017020' => 'cqu', 'AUR62019422' => 'cqu', 'AUR62023570' => 'cqu', 'AUR62025571' => 'cqu', 'AUR62029098' => 'cqu', 'AUR62033863' => 'cqu', 'AUR62034296' => 'cqu', 'AUR62040075' => 'cqu', 'BcaB02g07334' => 'bca', 'BcaB02g10575' => 'bca', 'BcaB03g12119' => 'bca', 'BcaB03g12120' => 'bca', 'BcaB03g13945' => 'bca', 'BcaB04g17123' => 'bca', 'BcaB04g17867' => 'bca', 'BcaB04g19839' => 'bca', 'BcaB07g30317' => 'bca', 'BcaB07g32432' => 'bca', 'BcaB07g33362' => 'bca', 'BcaB08g36611' => 'bca', 'BcaC01g00028' => 'bca', 'BcaC01g01356' => 'bca', 'BcaC01g02034' => 'bca', 'BcaC01g06051' => 'bca', 'BcaC03g16839' => 'bca', 'BcaC03g17176' => 'bca', 'BcaC05g26829' => 'bca', 'BcaC06g31490' => 'bca', 'BcaC06g35344' => 'bca', 'BcaC06g36570' => 'bca', 'BcaC07g37537' => 'bca', 'BcaC08g43491' => 'bca', 'BcaC08g43773' => 'bca', 'BcaNung00234' => 'bca', 'BcaNung01982' => 'bca', 'BcaNung03707' => 'bca', 'BcaNung06454' => 'bca', 'BolC2t10762H' => 'bol', 'BolC2t11191H' => 'bol', 'BolC3t14322H' => 'bol', 'BolC3t19747H' => 'bol', 'BolC3t21425H' => 'bol', 'BolC4t27800H' => 'bol', 'BolC5t31423H' => 'bol', 'BolC6t35951H' => 'bol', 'BolC6t36282H' => 'bol', 'BolC7t40678H' => 'bol', 'BolC7t40679H' => 'bol', 'BolC7t42222H' => 'bol', 'BolC7t43492H' => 'bol', 'BolC7t46785H' => 'bol', 'BolC8t47853H' => 'bol', 'BolC9t56805H' => 'bol', 'BraA02t08000Z' => 'bra', 'BraA02t08341Z' => 'bra', 'BraA03t10936Z' => 'bra', 'BraA03t15657Z' => 'bra', 'BraA04t18100Z' => 'bra', 'BraA05t20523Z' => 'bra', 'BraA06t23353Z' => 'bra', 'BraA06t27473Z' => 'bra', 'BraA06t27769Z' => 'bra', 'BraA07t28928Z' => 'bra', 'BraA08t32236Z' => 'bra', 'BraA08t32841Z' => 'bra', 'BraA08t34524Z' => 'bra', 'BraA09t38742Z' => 'bra', 'BraA09t39295Z' => 'bra', 'C02p47180' => 'bna', 'C02p50990' => 'bna', 'C03p19360' => 'bna', 'C03p74950' => 'bna', 'C03p91000' => 'bna', 'C04p63260' => 'bna', 'C05p27050' => 'bna', 'C06p08750' => 'bna', 'C06p11490' => 'bna', 'C07p02820' => 'bna', 'C07p17180' => 'bna', 'C07p29440' => 'bna', 'C07p63730' => 'bna', 'C09p39260' => 'bna', 'CAN.G1164.34' => 'can', 'CAN.G1164.39' => 'can', 'CAN.G1530.3' => 'can', 'CAN.G162.61' => 'can', 'CAN.G176.6' => 'can', 'CAN.G289.49' => 'can', 'CAN.G370.21' => 'can', 'CAN.G370.22' => 'can', 'CAN.G371.117' => 'can', 'CAN.G58.37' => 'can', 'CAN.G588.98' => 'can', 'CANSAT21G2266' => 'cansat', 'CANSAT25G2799' => 'cansat', 'CANSAT35G0862' => 'cansat', 'CANSAT35G1704' => 'cansat', 'CANSAT35G1760' => 'cansat', 'CANSAT56G3971' => 'cansat', 'CANSAT56G4116' => 'cansat', 'CANSAT80G1259' => 'cansat', 'CARHR027730' => 'chi', 'CARHR033880' => 'chi', 'CARHR043270' => 'chi', 'CARHR145330' => 'chi', 'CARHR145340' => 'chi', 'CARHR175570' => 'chi', 'CARHR181570' => 'chi', 'CARHR258470' => 'chi', 'CARHR260490' => 'chi', 'CARHR294220' => 'chi', 'Carub.0001s2668' => 'cru', 'Carub.0001s3257' => 'cru', 'Carub.0001s4220' => 'cru', 'Carub.0005s0179' => 'cru', 'Carub.0006s2807' => 'cru', 'Carub.0007s0039' => 'cru', 'Carub.0008s0169' => 'cru', 'Carub.0008s0636' => 'cru', 'Ca_00338_v3' => 'car', 'Ca_00542_v3' => 'car', 'Ca_01844_v3' => 'car', 'Ca_10611_v3' => 'car', 'Ca_13326_v3' => 'car', 'Ca_17944_v3' => 'car', 'Ca_18546_v3' => 'car', 'Ca_24219_v3' => 'car', 'Ca_29972_v3' => 'car', 'CBR_g3681' => 'cbr', 'CBR_g40021' => 'cbr', 'Cc01_g08140' => 'ccan', 'Cc02_g13410' => 'ccan', 'Cc02_g37480' => 'ccan', 'Cc05_g12030' => 'ccan', 'Cc09_g03370' => 'ccan', 'Cc09_g10300' => 'ccan', 'Cc10_g03530' => 'ccan', 'Cc10_g11380' => 'ccan', 'CDE01G0176' => 'cde', 'CDE02G0675' => 'cde', 'CDE02G0942' => 'cde', 'CDE02G1153' => 'cde', 'CDE02G4177' => 'cde', 'CDE04G2117' => 'cde', 'CDE04G2736' => 'cde', 'CDE08G1161' => 'cde', 'CDE09G1238' => 'cde', 'Cfa000467' => 'cfa', 'Cfa000947' => 'cfa', 'Cfa004969' => 'cfa', 'Cfa005284' => 'cfa', 'Cfa008993' => 'cfa', 'Cfa018187' => 'cfa', 'Cfa018454' => 'cfa', 'Cfa020585' => 'cfa', 'Ciclev10000424m.g' => 'ccl', 'Ciclev10003605m.g' => 'ccl', 'Ciclev10007828m.g' => 'ccl', 'Ciclev10014620m.g' => 'ccl', 'Ciclev10015169m.g' => 'ccl', 'Ciclev10018291m.g' => 'ccl', 'Ciclev10028256m.g' => 'ccl', 'Ciclev10033822m.g' => 'ccl', 'CiPaw.05G060300' => 'cil', 'CiPaw.05G085000' => 'cil', 'CiPaw.06G083700' => 'cil', 'CiPaw.06G120300' => 'cil', 'CiPaw.09G060500' => 'cil', 'CiPaw.09G123800' => 'cil', 'CiPaw.11G169700' => 'cil', 'CiPaw.12G118300' => 'cil', 'CiPaw.15G071000' => 'cil', 'CiPaw.15G081900' => 'cil', 'ClCG01G024610' => 'cla', 'ClCG03G006070' => 'cla', 'ClCG05G019250' => 'cla', 'ClCG09G009500' => 'cla', 'ClCG11G008200' => 'cla', 'ClCG11G018080' => 'cla', 'COL.COLO4_17373' => 'col', 'COL.COLO4_22994' => 'col', 'COL.COLO4_26389' => 'col', 'COL.COLO4_27170' => 'col', 'COL.COLO4_31074' => 'col', 'COL.COLO4_31465' => 'col', 'COL.COLO4_36438' => 'col', 'COL.COLO4_36439' => 'col', 'Cpa.g.c38781' => 'cpa', 'Cpa.g.sc128.12' => 'cpa', 'Cpa.g.sc166.7' => 'cpa', 'Cpa.g.sc166.8' => 'cpa', 'Cpa.g.sc20.111' => 'cpa', 'Cpa.g.sc27.31' => 'cpa', 'Cpa.g.sc64.36' => 'cpa', 'Cpa.g.sc64.37' => 'cpa', 'Cpa.g.sc66.49' => 'cpa', 'Cpa.g.sc80.64' => 'cpa', 'CsaV3_1G012320' => 'csa', 'CsaV3_2G008480' => 'csa', 'CsaV3_2G033450' => 'csa', 'CsaV3_3G044830' => 'csa', 'CsaV3_4G033710' => 'csa', 'CsaV3_6G051730' => 'csa', 'CsaV3_7G025350' => 'csa', 'CSS0001067' => 'camsi', 'CSS0005996' => 'camsi', 'CSS0006590' => 'camsi', 'CSS0009673' => 'camsi', 'CSS0010201' => 'camsi', 'CSS0010549' => 'camsi', 'CSS0011364' => 'camsi', 'CSS0014473' => 'camsi', 'CSS0014961' => 'camsi', 'CSS0020191' => 'camsi', 'CSS0021165' => 'camsi', 'CSS0022306' => 'camsi', 'CSS0030591' => 'camsi', 'CSS0030696' => 'camsi', 'CSS0032653' => 'camsi', 'CSS0037487' => 'camsi', 'CSS0041102' => 'camsi', 'CSS0041261' => 'camsi', 'CSS0046246' => 'camsi', 'CSS0049256' => 'camsi', 'DCAR_004075' => 'dca', 'DCAR_011538' => 'dca', 'DCAR_019553' => 'dca', 'DCAR_020952' => 'dca', 'DCAR_021739' => 'dca', 'DCAR_027407' => 'dca', 'DCAR_027913' => 'dca', 'DCAR_028066' => 'dca', 'Dinv05899' => 'din', 'Dinv07563' => 'din', 'Dinv08010' => 'din', 'Dinv14125' => 'din', 'Dinv20172' => 'din', 'Dinv30743' => 'din', 'Dinv31229' => 'din', 'Dinv34162' => 'din', 'Dinv36028' => 'din', 'Dinv39368' => 'din', 'Dinv40565' => 'din', 'Dinv41706' => 'din', 'Duzib052G0089' => 'dzi', 'Duzib116G0641' => 'dzi', 'Duzib132G0069' => 'dzi', 'Duzib132G1219' => 'dzi', 'Duzib147G0278' => 'dzi', 'Duzib160G0480' => 'dzi', 'Duzib170G0661' => 'dzi', 'Duzib177G0591' => 'dzi', 'Duzib187G1353' => 'dzi', 'Duzib192G0858' => 'dzi', 'Duzib192G0883' => 'dzi', 'Duzib213G0506' => 'dzi', 'Duzib235G0289' => 'dzi', 'Duzib251G0422' => 'dzi', 'ECA232G3898' => 'eca', 'ECA233G5950' => 'eca', 'ECA234G1699' => 'eca', 'ECA234G2421' => 'eca', 'ECA236G0426' => 'eca', 'ECA236G4331' => 'eca', 'ECA248G2573' => 'eca', 'EL10Ac1g00077' => 'bvu', 'EL10Ac1g01746' => 'bvu', 'EL10Ac2g03464' => 'bvu', 'EL10Ac4g08176' => 'bvu', 'EL10Ac7g17521' => 'bvu', 'EL10Ac8g20386' => 'bvu', 'EL10Ac9g21343' => 'bvu', 'EL10Ac9g22688' => 'bvu', 'Eucgr.B03434' => 'egr', 'Eucgr.D00618' => 'egr', 'Eucgr.E02395' => 'egr', 'Eucgr.F01129' => 'egr', 'Eucgr.F02622' => 'egr', 'Eucgr.F04207' => 'egr', 'FAN01G0570' => 'fan', 'FAN03G3351' => 'fan', 'FAN06G3702' => 'fan', 'FAN07G2149' => 'fan', 'FAN10G3758' => 'fan', 'FAN11G1170' => 'fan', 'FAN11G2050' => 'fan', 'FAN11G2724' => 'fan', 'FAN12G1700' => 'fan', 'FAN12G2028' => 'fan', 'FAN15G1160' => 'fan', 'FAN15G3063' => 'fan', 'FAN16G2540' => 'fan', 'FAN16G3077' => 'fan', 'FAN16G3624' => 'fan', 'FAN17G0221' => 'fan', 'FAN20G2492' => 'fan', 'FAN20G2905' => 'fan', 'FAN21G0548' => 'fan', 'FAN21G1300' => 'fan', 'FAN22G0077' => 'fan', 'FAN22G1315' => 'fan', 'FAN24G1280' => 'fan', 'FAN24G1445' => 'fan', 'FAN24G3527' => 'fan', 'FAN25G0464' => 'fan', 'FAN25G2885' => 'fan', 'FAN25G3270' => 'fan', 'FAN27G1101' => 'fan', 'FAN27G2846' => 'fan', 'FAN27G3524' => 'fan', 'FvH4_2g11770' => 'fve', 'FvH4_2g15630' => 'fve', 'FvH4_3g05570' => 'fve', 'FvH4_3g09110' => 'fve', 'FvH4_3g19940' => 'fve', 'FvH4_4g04821' => 'fve', 'FvH4_4g31480' => 'fve', 'FvH4_7g01740' => 'fve', 'Glyma.05G130400' => 'gma', 'Glyma.05G156400' => 'gma', 'Glyma.07G197000' => 'gma', 'Glyma.08G085151' => 'gma', 'Glyma.08G114500' => 'gma', 'Glyma.08G300400' => 'gma', 'Glyma.10G215800' => 'gma', 'Glyma.12G224400' => 'gma', 'Glyma.13G179300' => 'gma', 'Glyma.13G218151' => 'gma', 'Glyma.13G238800' => 'gma', 'Glyma.13G276900' => 'gma', 'Glyma.14G078200' => 'gma', 'Glyma.15G074500' => 'gma', 'Glyma.15G094100' => 'gma', 'Glyma.17G247200' => 'gma', 'Glyma.18G120100' => 'gma', 'Glyma.20G176000' => 'gma', 'Gohir.A01G063600' => 'ghi', 'Gohir.A01G170301' => 'ghi', 'Gohir.A02G060500' => 'ghi', 'Gohir.A05G133850' => 'ghi', 'Gohir.A05G161400' => 'ghi', 'Gohir.A06G012900' => 'ghi', 'Gohir.A06G035901' => 'ghi', 'Gohir.A06G127100' => 'ghi', 'Gohir.A06G210500' => 'ghi', 'Gohir.A08G008650' => 'ghi', 'Gohir.A09G072700' => 'ghi', 'Gohir.A09G088301' => 'ghi', 'Gohir.A10G040600' => 'ghi', 'Gohir.A12G036300' => 'ghi', 'Gohir.A12G143350' => 'ghi', 'Gohir.A12G165500' => 'ghi', 'Gohir.A13G145700' => 'ghi', 'Gohir.D01G050000' => 'ghi', 'Gohir.D01G051366' => 'ghi', 'Gohir.D01G161350' => 'ghi', 'Gohir.D02G065900' => 'ghi', 'Gohir.D05G164200' => 'ghi', 'Gohir.D05G355500' => 'ghi', 'Gohir.D06G010400' => 'ghi', 'Gohir.D06G111250' => 'ghi', 'Gohir.D06G132000' => 'ghi', 'Gohir.D06G210500' => 'ghi', 'Gohir.D07G165675' => 'ghi', 'Gohir.D08G062240' => 'ghi', 'Gohir.D08G086101' => 'ghi', 'Gohir.D08G138060' => 'ghi', 'Gohir.D09G072300' => 'ghi', 'Gohir.D10G041400' => 'ghi', 'Gohir.D11G191020' => 'ghi', 'Gohir.D11G212066' => 'ghi', 'Gohir.D12G036300' => 'ghi', 'Gohir.D12G168600' => 'ghi', 'Gohir.D13G150600' => 'ghi', 'Gorai.001G057300' => 'gra', 'Gorai.002G069900' => 'gra', 'Gorai.002G200000' => 'gra', 'Gorai.003G067600' => 'gra', 'Gorai.005G074800' => 'gra', 'Gorai.006G087300' => 'gra', 'Gorai.008G037500' => 'gra', 'Gorai.008G181400' => 'gra', 'Gorai.009G169400' => 'gra', 'Gorai.009G387900' => 'gra', 'Gorai.010G013300' => 'gra', 'Gorai.010G153800' => 'gra', 'Gorai.010G255800' => 'gra', 'Gorai.011G043700' => 'gra', 'Gorai.011G198900' => 'gra', 'Gorai.013G168400' => 'gra', 'GSVIVG01005212001' => 'vvi', 'GSVIVG01006163001' => 'vvi', 'GSVIVG01009625001' => 'vvi', 'GSVIVG01014338001' => 'vvi', 'GSVIVG01020005001' => 'vvi', 'GSVIVG01021450001' => 'vvi', 'GSVIVG01023975001' => 'vvi', 'GSVIVG01034490001' => 'vvi', 'HanXRQChr04g0112071' => 'han', 'HanXRQChr05g0131151' => 'han', 'HanXRQChr09g0262371' => 'han', 'HanXRQChr09g0268401' => 'han', 'HanXRQChr10g0279241' => 'han', 'HanXRQChr10g0297961' => 'han', 'HanXRQChr11g0326231' => 'han', 'HanXRQChr11g0328471' => 'han', 'HanXRQChr16g0507941' => 'han', 'HanXRQChr17g0560211' => 'han', 'Haze_02108' => 'cav', 'Haze_02428' => 'cav', 'Haze_05593' => 'cav', 'Haze_06448' => 'cav', 'Haze_09427' => 'cav', 'Haze_12022' => 'cav', 'Haze_17612' => 'cav', 'Haze_17928' => 'cav', 'Hma1.2p1_0032F.1_g019250' => 'hma', 'Hma1.2p1_0163F.1_g072690' => 'hma', 'Hma1.2p1_0265F.1_g106710' => 'hma', 'Hma1.2p1_0286F.1_g113970' => 'hma', 'Hma1.2p1_0363F.1_g136640' => 'hma', 'Hma1.2p1_0584F.1_g183470' => 'hma', 'Hma1.2p1_0885F.1_g232570' => 'hma', 'HPP92_006022' => 'vpl', 'HPP92_007320' => 'vpl', 'HPP92_011521' => 'vpl', 'HPP92_019387' => 'vpl', 'HPP92_024038' => 'vpl', 'Hund05891' => 'sun', 'Hund06450' => 'sun', 'Hund12053' => 'sun', 'Hund16800' => 'sun', 'Hund21222' => 'sun', 'Hund22896' => 'sun', 'Hund23746' => 'sun', 'Hund27083' => 'sun', 'Lalb_Chr02g0141831' => 'lal', 'Lalb_Chr02g0141841' => 'lal', 'Lalb_Chr05g0220411' => 'lal', 'Lalb_Chr06g0162081' => 'lal', 'Lalb_Chr09g0327651' => 'lal', 'Lalb_Chr13g0295051' => 'lal', 'Lalb_Chr15g0086801' => 'lal', 'Lalb_Chr16g0383781' => 'lal', 'Lalb_Chr16g0383791' => 'lal', 'Lalb_Chr18g0055441' => 'lal', 'Lalb_Chr18g0059611' => 'lal', 'Lalb_Chr20g0109661' => 'lal', 'Lalb_Chr20g0109831' => 'lal', 'Lalb_Chr20g0121871' => 'lal', 'Lalb_Chr22g0355361' => 'lal', 'Lalb_Chr25g0286371' => 'lal', 'Lj1A1187G43' => 'lonja', 'Lj1A1205T50' => 'lonja', 'Lj1A800G33' => 'lonja', 'Lj1C1187T7' => 'lonja', 'Lj1C843T11' => 'lonja', 'Lj1g0010940' => 'lja', 'Lj2A288T69' => 'lonja', 'Lj3g0024276' => 'lja', 'Lj4A47T76' => 'lonja', 'Lj4g0005805' => 'lja', 'Lj4g0006097' => 'lja', 'Lj4g0008528' => 'lja', 'Lj4g0024907' => 'lja', 'Lj5g0012472' => 'lja', 'Lj5g0018648' => 'lja', 'Lj6C789G1' => 'lonja', 'Lj6g0004000' => 'lja', 'Lj7A292G67' => 'lonja', 'Lj7A292T64' => 'lonja', 'Lj9A400T58' => 'lonja', 'Lsat_1_v5_gn_1_126181' => 'lsa', 'Lsat_1_v5_gn_4_123041' => 'lsa', 'Lsat_1_v5_gn_4_133620' => 'lsa', 'Lsat_1_v5_gn_4_53221' => 'lsa', 'Lsat_1_v5_gn_4_71961' => 'lsa', 'Lsat_1_v5_gn_7_105241' => 'lsa', 'Lsat_1_v5_gn_7_21361' => 'lsa', 'Lsat_1_v5_gn_7_28860' => 'lsa', 'Lsat_1_v5_gn_7_31260' => 'lsa', 'Lsat_1_v5_gn_8_52801' => 'lsa', 'Manes.02G191400' => 'mes', 'Manes.03G110100' => 'mes', 'Manes.04G071100' => 'mes', 'Manes.05G100500' => 'mes', 'Manes.05G164700' => 'mes', 'Manes.15G087000' => 'mes', 'Manes.15G121500' => 'mes', 'Manes.16G028300' => 'mes', 'Manes.17G046100' => 'mes', 'Manes.17G069800' => 'mes', 'Manes.18G100500' => 'mes', 'Mapoly0002s0109' => 'mpo', 'Mapoly0024s0007' => 'mpo', 'Mapoly0089s0032' => 'mpo', 'MBI04_g42241_MAGBIO' => 'mbi', 'MBI05_g11988_MAGBIO' => 'mbi', 'MBI05_g35452_MAGBIO' => 'mbi', 'MBI07_g30179_MAGBIO' => 'mbi', 'MBI07_g35859_MAGBIO' => 'mbi', 'MBI07_g35860_MAGBIO' => 'mbi', 'MBI07_g37166_MAGBIO' => 'mbi', 'MBI08_g18172_MAGBIO' => 'mbi', 'MBI09_g08441_MAGBIO' => 'mbi', 'MBI13_g01676_MAGBIO' => 'mbi', 'MBI14_g42955_MAGBIO' => 'mbi', 'MBI16_g13161_MAGBIO' => 'mbi', 'MBI17_g27204_MAGBIO' => 'mbi', 'MBI19_g21595_MAGBIO' => 'mbi', 'MD00G1148400' => 'mdo', 'MD02G1301200' => 'mdo', 'MD03G1227800' => 'mdo', 'MD05G1041100' => 'mdo', 'MD05G1124800' => 'mdo', 'MD05G1284000' => 'mdo', 'MD05G1338800' => 'mdo', 'MD05G1338900' => 'mdo', 'MD07G1022800' => 'mdo', 'MD10G1047500' => 'mdo', 'MD10G1127500' => 'mdo', 'MD10G1262300' => 'mdo', 'MD10G1293800' => 'mdo', 'MD16G1074300' => 'mdo', 'Medtr1g021670' => 'mtr', 'Medtr1g096320' => 'mtr', 'Medtr2g013690' => 'mtr', 'Medtr2g019450' => 'mtr', 'Medtr2g085170' => 'mtr', 'Medtr4g088785' => 'mtr', 'Medtr8g055930' => 'mtr', 'Medtr8g085850' => 'mtr', 'MELO3C002605.2' => 'cme', 'MELO3C003891.2' => 'cme', 'MELO3C004012.2' => 'cme', 'MELO3C007134.2' => 'cme', 'MELO3C008118.2' => 'cme', 'MELO3C016700.2' => 'cme', 'MELO3C024127.2' => 'cme', 'MELO3C033361.2' => 'cme', 'MELO3C033362.2' => 'cme', 'Migut.C00430' => 'egut', 'Migut.C01246' => 'egut', 'Migut.E00101' => 'egut', 'Migut.H01486' => 'egut', 'Migut.H01939' => 'egut', 'Migut.K00360' => 'egut', 'Migut.M00910' => 'egut', 'Migut.M01139' => 'egut', 'Migut.N02677' => 'egut', 'MSTRG.13252' => 'ama', 'MSTRG.14701' => 'ama', 'MSTRG.1521' => 'ama', 'MSTRG.15884' => 'ama', 'MSTRG.16242' => 'ama', 'MSTRG.22285' => 'ama', 'MSTRG.22444' => 'ama', 'MSTRG.2349' => 'ama', 'MSTRG.26308' => 'ama', 'MSTRG.28296' => 'ama', 'MSTRG.9895' => 'ama', 'Nitab4.5_0000110g0060' => 'nta', 'Nitab4.5_0000420g0130' => 'nta', 'Nitab4.5_0000422g0030' => 'nta', 'Nitab4.5_0000560g0180' => 'nta', 'Nitab4.5_0000703g0100' => 'nta', 'Nitab4.5_0000786g0200' => 'nta', 'Nitab4.5_0001336g0020' => 'nta', 'Nitab4.5_0001796g0030' => 'nta', 'Nitab4.5_0003348g0060' => 'nta', 'Nitab4.5_0003698g0040' => 'nta', 'Nitab4.5_0003942g0090' => 'nta', 'Nitab4.5_0004775g0070' => 'nta', 'Nitab4.5_0004864g0030' => 'nta', 'Nitab4.5_0005615g0020' => 'nta', 'Nitab4.5_0009288g0030' => 'nta', 'Nitab4.5_0009341g0010' => 'nta', 'Nitab4.5_0009535g0010' => 'nta', 'Nn1g03995' => 'nnu', 'Nn1g04100' => 'nnu', 'Nn1g06530' => 'nnu', 'Nn3g16404' => 'nnu', 'Nn3g17212' => 'nnu', 'Nn3g20776' => 'nnu', 'Nn3g21923' => 'nnu', 'Nn5g27737' => 'nnu', 'Nn5g29461' => 'nnu', 'Nn7g38355' => 'nnu', 'Nn8g39873' => 'nnu', 'Oeu000548.2' => 'oeu', 'Oeu004672.1' => 'oeu', 'Oeu015605.2' => 'oeu', 'Oeu016092.1' => 'oeu', 'Oeu017879.3' => 'oeu', 'Oeu024910.1' => 'oeu', 'Oeu028965.1' => 'oeu', 'Oeu031269.1' => 'oeu', 'Oeu031270.1' => 'oeu', 'Oeu032535.1' => 'oeu', 'Oeu034151.1' => 'oeu', 'Oeu034152.1' => 'oeu', 'Oeu034588.2' => 'oeu', 'Oeu050846.1' => 'oeu', 'Oeu050849.2' => 'oeu', 'Oeu051063.2' => 'oeu', 'Oeu052368.1' => 'oeu', 'Oeu052370.1' => 'oeu', 'Os01g0210400' => 'osa', 'Os01g0304300' => 'osa', 'Os01g0749100' => 'osa', 'Os02g0745800' => 'osa', 'Os03g0769050' => 'osa', 'Os05g0531500' => 'osa', 'Os06g0724300' => 'osa', 'Os11g0198100' => 'osa', 'Peaxi162Scf00069g01425' => 'pax', 'Peaxi162Scf00280g00811' => 'pax', 'Peaxi162Scf00310g00615' => 'pax', 'Peaxi162Scf00362g00542' => 'pax', 'Peaxi162Scf00461g00310' => 'pax', 'Peaxi162Scf00530g00118' => 'pax', 'Peaxi162Scf00541g00057' => 'pax', 'Peaxi162Scf00661g00017' => 'pax', 'Peaxi162Scf00926g00027' => 'pax', 'Peaxi162Scf01064g00263' => 'pax', 'Peaxi162Scf01211g00135' => 'pax', 'PGR004G2336' => 'pgr', 'PGR042G0327' => 'pgr', 'PGR042G1957' => 'pgr', 'PGR042G2003' => 'pgr', 'PGR042G3929' => 'pgr', 'PGR083G1137' => 'pgr', 'PGR083G1364' => 'pgr', 'PGSC0003DMG400003381' => 'stu', 'PGSC0003DMG400003417' => 'stu', 'PGSC0003DMG400008981' => 'stu', 'PGSC0003DMG400012417' => 'stu', 'PGSC0003DMG400012823' => 'stu', 'PGSC0003DMG400016885' => 'stu', 'PGSC0003DMG400022812' => 'stu', 'PGSC0003DMG400029726' => 'stu', 'PGSC0003DMG401009243' => 'stu', 'PGSC0003DMG401031505' => 'stu', 'PGSC0003DMG402031505' => 'stu', 'Phvul.001G017600' => 'pvu', 'Phvul.002G193500' => 'pvu', 'Phvul.002G228900' => 'pvu', 'Phvul.002G236800' => 'pvu', 'Phvul.003G049500' => 'pvu', 'Phvul.005G072000' => 'pvu', 'Phvul.006G164800' => 'pvu', 'Phvul.006G185100' => 'pvu', 'Phvul.007G090000' => 'pvu', 'Potri.001G399800' => 'ptr', 'Potri.002G149900' => 'ptr', 'Potri.004G044100' => 'ptr', 'Potri.004G177600' => 'ptr', 'Potri.009G138000' => 'ptr', 'Potri.010G094000' => 'ptr', 'Potri.011G053000' => 'ptr', 'Potri.011G119300' => 'ptr', 'Potri.013G113700' => 'ptr', 'Potri.018G107800' => 'ptr', 'Potri.019G084100' => 'ptr', 'Pp3c14_23720' => 'ppa', 'Pp3c16_6340' => 'ppa', 'Pp3c23_13420' => 'ppa', 'Pp3c24_2740' => 'ppa', 'Pp3c25_860' => 'ppa', 'Pp3c8_21750' => 'ppa', 'Prupe.1G273000' => 'ppe', 'Prupe.1G273700' => 'ppe', 'Prupe.1G274100' => 'ppe', 'Prupe.2G023300' => 'ppe', 'Prupe.4G048000' => 'ppe', 'Prupe.4G080400' => 'ppe', 'Prupe.4G181200' => 'ppe', 'Prupe.8G056900' => 'ppe', 'Prupe.8G168700' => 'ppe', 'Psat1g189080' => 'psa', 'Psat1g204760' => 'psa', 'Psat4g175560' => 'psa', 'Psat4g177720' => 'psa', 'Psat5g244240' => 'psa', 'Psat6g010720' => 'psa', 'Psat6g187200' => 'psa', 'Psat7g072040' => 'psa', 'PSO017G3501' => 'pso', 'PSO063G2148' => 'pso', 'PSO063G5608' => 'pso', 'PSO210G6392' => 'pso', 'PSO541G2319' => 'pso', 'PSO541G2836' => 'pso', 'PSO541G4012' => 'pso', 'PSO541G6253' => 'pso', 'PSO675G0580' => 'pso', 'PSO675G0856' => 'pso', 'PSO675G5635' => 'pso', 'PSO675G9157' => 'pso', 'PSO832G1660' => 'pso', 'PSO832G1969' => 'pso', 'QL02p007186' => 'qlo', 'QL02p033904' => 'qlo', 'QL03p064391' => 'qlo', 'QL05p040593' => 'qlo', 'QL05p058242' => 'qlo', 'QL08p021825' => 'qlo', 'QL11p004981' => 'qlo', 'RcHm_v2.0_Chr1g0318301' => 'rch', 'RcHm_v2.0_Chr4g0418501' => 'rch', 'RcHm_v2.0_Chr4g0439971' => 'rch', 'RcHm_v2.0_Chr5g0008541' => 'rch', 'RcHm_v2.0_Chr5g0014101' => 'rch', 'RcHm_v2.0_Chr5g0014131' => 'rch', 'RcHm_v2.0_Chr5g0033621' => 'rch', 'RcHm_v2.0_Chr6g0272041' => 'rch', 'RcHm_v2.0_Chr6g0278831' => 'rch', 'Rhsim02G0130400' => 'rsi', 'Rhsim02G0171100' => 'rsi', 'Rhsim05G0053000' => 'rsi', 'Rhsim05G0053100' => 'rsi', 'Rhsim06G0096500' => 'rsi', 'Rhsim06G0096600' => 'rsi', 'Rhsim06G0199100' => 'rsi', 'Rhsim12G0062300' => 'rsi', 'Rhsim12G0062800' => 'rsi', 'Sabra02G0118600' => 'sbr', 'Sabra04G0027300' => 'sbr', 'Sabra04G0119500' => 'sbr', 'Sabra08G0112500' => 'sbr', 'Sabra11G0036800' => 'sbr', 'Sabra11G0103800' => 'sbr', 'Sabra13G0096300' => 'sbr', 'Sabra16G0262300' => 'sbr', 'Sabra18G0091700' => 'sbr', 'Sabra19G0095400' => 'sbr', 'SalBow6G3080' => 'sbo', 'SalBow7G1157' => 'sbo', 'SalBow7G2123' => 'sbo', 'SalBow7G2285' => 'sbo', 'SalBow7G3537' => 'sbo', 'SalBow8G2947' => 'sbo', 'SalBow8G4463' => 'sbo', 'SalBow8G5466' => 'sbo', 'Sc01g0001750' => 'sci', 'Sc02g0006640' => 'sci', 'Sc02g0006670' => 'sci', 'Sc04g0008220' => 'sci', 'Sc05g0006190' => 'sci', 'Sc08g0002760' => 'sci', 'Sc17g0006170' => 'sci', 'Sc22g0002050' => 'sci', 'Sc23g0001190' => 'sci', 'Sc24g0000980' => 'sci', 'Sed0006245' => 'sed', 'Sed0007543' => 'sed', 'Sed0009411' => 'sed', 'Sed0010765' => 'sed', 'Sed0012944' => 'sed', 'Sed0014682' => 'sed', 'Sed0016174' => 'sed', 'Sed0016796' => 'sed', 'Sed0020317' => 'sed', 'Sed0021467' => 'sed', 'SEGI_01316' => 'sgi', 'SEGI_03374' => 'sgi', 'SEGI_16265' => 'sgi', 'SEGI_18569' => 'sgi', 'SEGI_20351' => 'sgi', 'SEGI_26395' => 'sgi', 'SEGI_29469' => 'sgi', 'SEGI_34771' => 'sgi', 'SEGI_36769' => 'sgi', 'SEGI_37139' => 'sgi', 'SGA_v2.0_scaffold100G29687' => 'sas', 'SGA_v2.0_scaffold118G32472' => 'sas', 'SGA_v2.0_scaffold14G07051' => 'sas', 'SGA_v2.0_scaffold183G39845' => 'sas', 'SGA_v2.0_scaffold1G00174' => 'sas', 'SGA_v2.0_scaffold22G09714' => 'sas', 'SGA_v2.0_scaffold333G48992' => 'sas', 'SGA_v2.0_scaffold46G17491' => 'sas', 'SGA_v2.0_scaffold49G18294' => 'sas', 'SGA_v2.0_scaffold63G21658' => 'sas', 'SHI01741' => 'shi', 'SHI05771' => 'shi', 'SHI18077' => 'shi', 'SHI20525' => 'shi', 'SHI20527' => 'shi', 'SHI20528' => 'shi', 'SMO172G0185' => 'smo', 'SMO198G0020' => 'smo', 'SMO351G0006' => 'smo', 'SMO356G0118' => 'smo', 'SMO358G0296' => 'smo', 'SMO367G0079' => 'smo', 'SMO367G1277' => 'smo', 'Solyc01g014220.3' => 'sly', 'Solyc01g111770.2' => 'sly', 'Solyc02g078180.3' => 'sly', 'Solyc03g006430.3' => 'sly', 'Solyc03g006456.1' => 'sly', 'Solyc03g079860.2' => 'sly', 'Solyc04g079770.3' => 'sly', 'Solyc05g007430.4' => 'sly', 'Solyc07g063150.3' => 'sly', 'Solyc08g016620.3' => 'sly', 'Solyc09g057590.3' => 'sly', 'Solyc09g057600.1' => 'sly', 'Solyc10g009050.3' => 'sly', 'Solyc11g017420.2' => 'sly', 'Sopen01g053810' => 'spe', 'Sopen02g023040' => 'spe', 'Sopen03g002440' => 'spe', 'Sopen04g033350' => 'spe', 'Sopen05g003310' => 'spe', 'Sopen07g004050' => 'spe', 'Sopen07g031340' => 'spe', 'Sopen08g006990' => 'spe', 'Sopen10g004830' => 'spe', 'Sopen11g009370' => 'spe', 'Sp1g24450' => 'spa', 'Sp1g29670' => 'spa', 'Sp1g39600' => 'spa', 'Sp2g11080' => 'spa', 'Sp2g13970' => 'spa', 'Sp4g16130' => 'spa', 'Sp6g13080' => 'spa', 'Sp7g37270' => 'spa', 'TAR371G0065' => 'tar', 'TAR376G0340' => 'tar', 'TAR376G0435' => 'tar', 'TAR381G0002' => 'tar', 'TAR381G1236' => 'tar', 'TAR624G0055' => 'tar', 'TAR624G0324' => 'tar', 'TAR624G0696' => 'tar', 'TAR624G0906' => 'tar', 'TAR625G0107' => 'tar', 'TAR626G0015' => 'tar', 'TAR626G1356' => 'tar', 'TAR627G0888' => 'tar', 'TAR628G0399' => 'tar', 'TAR628G1327' => 'tar', 'TAR629G2831' => 'tar', 'TAR629G2874' => 'tar', 'TAR633G1432' => 'tar', 'TAR633G2771' => 'tar', 'THA.LOC104803394' => 'tha', 'THA.LOC104805153' => 'tha', 'THA.LOC104806784' => 'tha', 'THA.LOC104810473' => 'tha', 'THA.LOC104813100' => 'tha', 'THA.LOC104814215' => 'tha', 'THA.LOC104815554' => 'tha', 'THA.LOC104820544' => 'tha', 'THA.LOC104824754' => 'tha', 'THA.LOC104827717' => 'tha', 'Thecc.02G031400' => 'tca', 'Thecc.02G055900' => 'tca', 'Thecc.02G350800' => 'tca', 'Thecc.06G150900' => 'tca', 'Thecc.06G186600' => 'tca', 'Thecc.07G089600' => 'tca', 'Thecc.08G020400' => 'tca', 'Thecc.08G182100' => 'tca', 'Thhalv10000873m.g' => 'esa', 'Thhalv10004185m.g' => 'esa', 'Thhalv10006981m.g' => 'esa', 'Thhalv10007204m.g' => 'esa', 'Thhalv10011374m.g' => 'esa', 'Thhalv10013482m.g' => 'esa', 'Thhalv10017801m.g' => 'esa', 'Thhalv10024983m.g' => 'esa', 'TPR.G12072' => 'tpr', 'TPR.G15769' => 'tpr', 'TPR.G16504' => 'tpr', 'TPR.G16506' => 'tpr', 'TPR.G24345' => 'tpr', 'TPR.G26666' => 'tpr', 'TPR.G27320' => 'tpr', 'TPR.G31819' => 'tpr', 'TPR.G38879' => 'tpr', 'TPR.G39015' => 'tpr', 'TPR.G8819' => 'tpr', 'TWI09G0924' => 'twi', 'TWI12G0811' => 'twi', 'TWI12G1294' => 'twi', 'TWI31G0150' => 'twi', 'TWI36G1262' => 'twi', 'TWI38G1287' => 'twi', 'TWI38G1633' => 'twi', 'TWI38G1982' => 'twi', 'TWI39G0116' => 'twi', 'TWI60G1011' => 'twi', 'TWI63G0171' => 'twi', 'TWI73G0839' => 'twi', 'TWI79G1511' => 'twi', 'unitig_0.g915' => 'ugi', 'unitig_0.g916' => 'ugi', 'unitig_21.g20219' => 'ugi', 'unitig_21.g20416' => 'ugi', 'unitig_578.g16132' => 'ugi', 'unitig_578.g16718' => 'ugi', 'unitig_62.g23481' => 'ugi', 'unitig_744.g24535' => 'ugi', 'unitig_749.g13525' => 'ugi', 'vmacro01248' => 'vma', 'vmacro02290' => 'vma', 'vmacro10946' => 'vma', 'vmacro11865' => 'vma', 'vmacro12493' => 'vma', 'vmacro17322' => 'vma', 'vmacro21599' => 'vma', 'vmacro23041' => 'vma', 'VMungo0251G0004' => 'vmu', 'VMungo0251G2639' => 'vmu', 'VMungo0251G2967' => 'vmu', 'VMungo0540G0864' => 'vmu', 'VMungo0540G1569' => 'vmu', 'VMungo0647G0317' => 'vmu', 'VMungo0720G1373' => 'vmu', 'VMungo0720G1508' => 'vmu', 'VMungo1080G0485' => 'vmu', 'VMungo1215G3177' => 'vmu', 'Zm00001eb112600' => 'zma', 'Zm00001eb120220' => 'zma', 'Zm00001eb153240' => 'zma', 'Zm00001eb168880' => 'zma', 'Zm00001eb213920' => 'zma', 'Zm00001eb228280' => 'zma', 'Zm00001eb254580' => 'zma', 'Zm00001eb272180' => 'zma', 'Zm00001eb293190' => 'zma', 'Zm00001eb322930' => 'zma', 'Zm00001eb353360' => 'zma', 'Zm00001eb353390' => 'zma', 'Zm00001eb353430' => 'zma', 'Zm00001eb353440' => 'zma', 'Zm00001eb353780' => 'zma' ), 'gf_id' => 'HOM05D000499', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000499' ), 'data_identifier' => 'HOM05D000499', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000499', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1066', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p29780' => 'bna', 'A02p33180' => 'bna', 'A03p16470' => 'bna', 'A03p66010' => 'bna', 'A04p25970' => 'bna', 'A06p01270' => 'bna', 'A06p46080' => 'bna', 'A07p11400' => 'bna', 'A08p01840' => 'bna', 'A08p08230' => 'bna', 'A08p25740' => 'bna', 'A09p32070' => 'bna', 'A09p37830' => 'bna', 'A09p42840' => 'bna', 'A09p42850' => 'bna', 'Aa31LG10G2060' => 'aar', 'Aa31LG2G7410' => 'aar', 'Aa31LG6G10200' => 'aar', 'Aa31LG6G16680' => 'aar', 'Aa31LG6G8470' => 'aar', 'Aa31LG9G12730' => 'aar', 'Aa31LG9G13680' => 'aar', 'Aa31LG9G14920' => 'aar', 'Aa31LG9G6650' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4977' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5467' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3254' => 'aag', 'Actinidia02578' => 'ach', 'Actinidia07693' => 'ach', 'Actinidia08413' => 'ach', 'Actinidia08414' => 'ach', 'Actinidia15289' => 'ach', 'Actinidia19871' => 'ach', 'Actinidia21475' => 'ach', 'Actinidia22576' => 'ach', 'Actinidia28327' => 'ach', 'Actinidia32491' => 'ach', 'Actinidia39463' => 'ach', 'Actinidia39571' => 'ach', 'Ah.01g013750' => 'amhyb', 'Ah.01g023210' => 'amhyb', 'Ah.04g164850' => 'amhyb', 'Ah.05g178060' => 'amhyb', 'Ah.07g204270' => 'amhyb', 'Ah.07g208480' => 'amhyb', 'Ah.09g237410' => 'amhyb', 'Ah.14g089460' => 'amhyb', 'AL1G41790' => 'aly', 'AL1G49050' => 'aly', 'AL1G53810' => 'aly', 'AL1G61400' => 'aly', 'AL4G18580' => 'aly', 'AL5G12510' => 'aly', 'AL5G12540' => 'aly', 'AL6G43230' => 'aly', 'AL7G10370' => 'aly', 'AL7G19250' => 'aly', 'AL8G12240' => 'aly', 'AL8G18540' => 'aly', 'Aqoxy1G02409' => 'aox', 'Aqoxy2G03993' => 'aox', 'Aqoxy3G03357' => 'aox', 'Aqoxy4G00785' => 'aox', 'Aqoxy5G02598' => 'aox', 'Aqoxy6G00132' => 'aox', 'Aqoxy7G01776' => 'aox', 'Aqoxy7G02316' => 'aox', 'Aqoxy7G03973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.12AFKW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B8730' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27IQR1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3F75VG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3RE0GA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41TCQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.527VTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FIR39' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5W8UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DA38EV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ63HS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H1I32C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HC27T5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4M8AP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7N3CZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9UVDZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LS1NQA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT1D4B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SKC4TM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCFV76' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF9Q1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQWD9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1ZM88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WE07RT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YCK7VH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJE6Q6' => 'arhy', 'AT1G28240' => 'ath', 'AT1G34550' => 'ath', 'AT1G53040' => 'ath', 'AT2G02910' => 'ath', 'AT4G09630' => 'ath', 'AT4G38500' => 'ath', 'AT5G42660' => 'ath', 'AT5G46220' => 'ath', 'ATR0152G026' => 'atr', 'ATR0564G343' => 'atr', 'ATR0706G151' => 'atr', 'ATR0733G207' => 'atr', 'ATR0751G234' => 'atr', 'ATR0807G048' => 'atr', 'ATR1091G084' => 'atr', 'Atru.chr10.1229' => 'acertr', 'Atru.chr10.1230' => 'acertr', 'Atru.chr10.1874' => 'acertr', 'Atru.chr11.1808' => 'acertr', 'Atru.chr13.1795' => 'acertr', 'Atru.chr13.570' => 'acertr', 'Atru.chr2.2608' => 'acertr', 'Atru.chr2.2609' => 'acertr', 'Atru.chr5.3428' => 'acertr', 'Atru.chr8.1171' => 'acertr', 'AUR62004651' => 'cqu', 'AUR62008675' => 'cqu', 'AUR62010014' => 'cqu', 'AUR62013004' => 'cqu', 'AUR62014825' => 'cqu', 'AUR62015015' => 'cqu', 'AUR62015151' => 'cqu', 'AUR62017020' => 'cqu', 'AUR62019422' => 'cqu', 'AUR62023570' => 'cqu', 'AUR62025571' => 'cqu', 'AUR62029098' => 'cqu', 'AUR62033863' => 'cqu', 'AUR62034296' => 'cqu', 'AUR62040075' => 'cqu', 'BcaB02g07334' => 'bca', 'BcaB02g10575' => 'bca', 'BcaB03g12119' => 'bca', 'BcaB03g12120' => 'bca', 'BcaB03g13945' => 'bca', 'BcaB04g17123' => 'bca', 'BcaB04g17867' => 'bca', 'BcaB04g19839' => 'bca', 'BcaB07g30317' => 'bca', 'BcaB07g32432' => 'bca', 'BcaB07g33362' => 'bca', 'BcaB08g36611' => 'bca', 'BcaC01g00028' => 'bca', 'BcaC01g01356' => 'bca', 'BcaC01g02034' => 'bca', 'BcaC01g06051' => 'bca', 'BcaC03g16839' => 'bca', 'BcaC03g17176' => 'bca', 'BcaC05g26829' => 'bca', 'BcaC06g31490' => 'bca', 'BcaC06g35344' => 'bca', 'BcaC06g36570' => 'bca', 'BcaC07g37537' => 'bca', 'BcaC08g43491' => 'bca', 'BcaC08g43773' => 'bca', 'BcaNung00234' => 'bca', 'BcaNung01982' => 'bca', 'BcaNung03707' => 'bca', 'BcaNung06454' => 'bca', 'BolC2t10762H' => 'bol', 'BolC2t11191H' => 'bol', 'BolC3t14322H' => 'bol', 'BolC3t19747H' => 'bol', 'BolC3t21425H' => 'bol', 'BolC4t27800H' => 'bol', 'BolC5t31423H' => 'bol', 'BolC6t35951H' => 'bol', 'BolC6t36282H' => 'bol', 'BolC7t40678H' => 'bol', 'BolC7t40679H' => 'bol', 'BolC7t42222H' => 'bol', 'BolC7t43492H' => 'bol', 'BolC7t46785H' => 'bol', 'BolC8t47853H' => 'bol', 'BolC9t56805H' => 'bol', 'BraA02t08000Z' => 'bra', 'BraA02t08341Z' => 'bra', 'BraA03t10936Z' => 'bra', 'BraA03t15657Z' => 'bra', 'BraA04t18100Z' => 'bra', 'BraA05t20523Z' => 'bra', 'BraA06t23353Z' => 'bra', 'BraA06t27473Z' => 'bra', 'BraA06t27769Z' => 'bra', 'BraA07t28928Z' => 'bra', 'BraA08t32236Z' => 'bra', 'BraA08t32841Z' => 'bra', 'BraA08t34524Z' => 'bra', 'BraA09t38742Z' => 'bra', 'BraA09t39295Z' => 'bra', 'C02p47180' => 'bna', 'C02p50990' => 'bna', 'C03p19360' => 'bna', 'C03p74950' => 'bna', 'C03p91000' => 'bna', 'C04p63260' => 'bna', 'C05p27050' => 'bna', 'C06p08750' => 'bna', 'C06p11490' => 'bna', 'C07p02820' => 'bna', 'C07p17180' => 'bna', 'C07p29440' => 'bna', 'C07p63730' => 'bna', 'C09p39260' => 'bna', 'CAN.G1164.34' => 'can', 'CAN.G1164.39' => 'can', 'CAN.G1530.3' => 'can', 'CAN.G162.61' => 'can', 'CAN.G176.6' => 'can', 'CAN.G289.49' => 'can', 'CAN.G370.21' => 'can', 'CAN.G370.22' => 'can', 'CAN.G371.117' => 'can', 'CAN.G58.37' => 'can', 'CAN.G588.98' => 'can', 'CANSAT21G2266' => 'cansat', 'CANSAT25G2799' => 'cansat', 'CANSAT35G0862' => 'cansat', 'CANSAT35G1704' => 'cansat', 'CANSAT35G1760' => 'cansat', 'CANSAT56G3971' => 'cansat', 'CANSAT56G4116' => 'cansat', 'CANSAT80G1259' => 'cansat', 'CARHR027730' => 'chi', 'CARHR033880' => 'chi', 'CARHR043270' => 'chi', 'CARHR145330' => 'chi', 'CARHR145340' => 'chi', 'CARHR175570' => 'chi', 'CARHR181570' => 'chi', 'CARHR258470' => 'chi', 'CARHR260490' => 'chi', 'CARHR294220' => 'chi', 'Carub.0001s2668' => 'cru', 'Carub.0001s3257' => 'cru', 'Carub.0001s4220' => 'cru', 'Carub.0005s0179' => 'cru', 'Carub.0006s2807' => 'cru', 'Carub.0007s0039' => 'cru', 'Carub.0008s0169' => 'cru', 'Carub.0008s0636' => 'cru', 'Ca_00338_v3' => 'car', 'Ca_00542_v3' => 'car', 'Ca_01844_v3' => 'car', 'Ca_10611_v3' => 'car', 'Ca_13326_v3' => 'car', 'Ca_17944_v3' => 'car', 'Ca_18546_v3' => 'car', 'Ca_24219_v3' => 'car', 'Ca_29972_v3' => 'car', 'CBR_g3681' => 'cbr', 'CBR_g40021' => 'cbr', 'Cc01_g08140' => 'ccan', 'Cc02_g13410' => 'ccan', 'Cc02_g37480' => 'ccan', 'Cc05_g12030' => 'ccan', 'Cc09_g03370' => 'ccan', 'Cc09_g10300' => 'ccan', 'Cc10_g03530' => 'ccan', 'Cc10_g11380' => 'ccan', 'CDE01G0176' => 'cde', 'CDE02G0675' => 'cde', 'CDE02G0942' => 'cde', 'CDE02G1153' => 'cde', 'CDE02G4177' => 'cde', 'CDE04G2117' => 'cde', 'CDE04G2736' => 'cde', 'CDE08G1161' => 'cde', 'CDE09G1238' => 'cde', 'Cfa000467' => 'cfa', 'Cfa000947' => 'cfa', 'Cfa004969' => 'cfa', 'Cfa005284' => 'cfa', 'Cfa008993' => 'cfa', 'Cfa018187' => 'cfa', 'Cfa018454' => 'cfa', 'Cfa020585' => 'cfa', 'Ciclev10000424m.g' => 'ccl', 'Ciclev10003605m.g' => 'ccl', 'Ciclev10007828m.g' => 'ccl', 'Ciclev10014620m.g' => 'ccl', 'Ciclev10015169m.g' => 'ccl', 'Ciclev10018291m.g' => 'ccl', 'Ciclev10028256m.g' => 'ccl', 'Ciclev10033822m.g' => 'ccl', 'CiPaw.05G060300' => 'cil', 'CiPaw.05G085000' => 'cil', 'CiPaw.06G083700' => 'cil', 'CiPaw.06G120300' => 'cil', 'CiPaw.09G060500' => 'cil', 'CiPaw.09G123800' => 'cil', 'CiPaw.11G169700' => 'cil', 'CiPaw.12G118300' => 'cil', 'CiPaw.15G071000' => 'cil', 'CiPaw.15G081900' => 'cil', 'ClCG01G024610' => 'cla', 'ClCG03G006070' => 'cla', 'ClCG05G019250' => 'cla', 'ClCG09G009500' => 'cla', 'ClCG11G008200' => 'cla', 'ClCG11G018080' => 'cla', 'COL.COLO4_17373' => 'col', 'COL.COLO4_22994' => 'col', 'COL.COLO4_26389' => 'col', 'COL.COLO4_27170' => 'col', 'COL.COLO4_31074' => 'col', 'COL.COLO4_31465' => 'col', 'COL.COLO4_36438' => 'col', 'COL.COLO4_36439' => 'col', 'Cpa.g.c38781' => 'cpa', 'Cpa.g.sc128.12' => 'cpa', 'Cpa.g.sc166.7' => 'cpa', 'Cpa.g.sc166.8' => 'cpa', 'Cpa.g.sc20.111' => 'cpa', 'Cpa.g.sc27.31' => 'cpa', 'Cpa.g.sc64.36' => 'cpa', 'Cpa.g.sc64.37' => 'cpa', 'Cpa.g.sc66.49' => 'cpa', 'Cpa.g.sc80.64' => 'cpa', 'CsaV3_1G012320' => 'csa', 'CsaV3_2G008480' => 'csa', 'CsaV3_2G033450' => 'csa', 'CsaV3_3G044830' => 'csa', 'CsaV3_4G033710' => 'csa', 'CsaV3_6G051730' => 'csa', 'CsaV3_7G025350' => 'csa', 'CSS0001067' => 'camsi', 'CSS0005996' => 'camsi', 'CSS0006590' => 'camsi', 'CSS0009673' => 'camsi', 'CSS0010201' => 'camsi', 'CSS0010549' => 'camsi', 'CSS0011364' => 'camsi', 'CSS0014473' => 'camsi', 'CSS0014961' => 'camsi', 'CSS0020191' => 'camsi', 'CSS0021165' => 'camsi', 'CSS0022306' => 'camsi', 'CSS0030591' => 'camsi', 'CSS0030696' => 'camsi', 'CSS0032653' => 'camsi', 'CSS0037487' => 'camsi', 'CSS0041102' => 'camsi', 'CSS0041261' => 'camsi', 'CSS0046246' => 'camsi', 'CSS0049256' => 'camsi', 'DCAR_004075' => 'dca', 'DCAR_011538' => 'dca', 'DCAR_019553' => 'dca', 'DCAR_020952' => 'dca', 'DCAR_021739' => 'dca', 'DCAR_027407' => 'dca', 'DCAR_027913' => 'dca', 'DCAR_028066' => 'dca', 'Dinv05899' => 'din', 'Dinv07563' => 'din', 'Dinv08010' => 'din', 'Dinv14125' => 'din', 'Dinv20172' => 'din', 'Dinv30743' => 'din', 'Dinv31229' => 'din', 'Dinv34162' => 'din', 'Dinv36028' => 'din', 'Dinv39368' => 'din', 'Dinv40565' => 'din', 'Dinv41706' => 'din', 'Duzib052G0089' => 'dzi', 'Duzib116G0641' => 'dzi', 'Duzib132G0069' => 'dzi', 'Duzib132G1219' => 'dzi', 'Duzib147G0278' => 'dzi', 'Duzib160G0480' => 'dzi', 'Duzib170G0661' => 'dzi', 'Duzib177G0591' => 'dzi', 'Duzib187G1353' => 'dzi', 'Duzib192G0858' => 'dzi', 'Duzib192G0883' => 'dzi', 'Duzib213G0506' => 'dzi', 'Duzib235G0289' => 'dzi', 'Duzib251G0422' => 'dzi', 'ECA232G3898' => 'eca', 'ECA233G5950' => 'eca', 'ECA234G1699' => 'eca', 'ECA234G2421' => 'eca', 'ECA236G0426' => 'eca', 'ECA236G4331' => 'eca', 'ECA248G2573' => 'eca', 'EL10Ac1g00077' => 'bvu', 'EL10Ac1g01746' => 'bvu', 'EL10Ac2g03464' => 'bvu', 'EL10Ac4g08176' => 'bvu', 'EL10Ac7g17521' => 'bvu', 'EL10Ac8g20386' => 'bvu', 'EL10Ac9g21343' => 'bvu', 'EL10Ac9g22688' => 'bvu', 'Eucgr.B03434' => 'egr', 'Eucgr.D00618' => 'egr', 'Eucgr.E02395' => 'egr', 'Eucgr.F01129' => 'egr', 'Eucgr.F02622' => 'egr', 'Eucgr.F04207' => 'egr', 'FAN01G0570' => 'fan', 'FAN03G3351' => 'fan', 'FAN06G3702' => 'fan', 'FAN07G2149' => 'fan', 'FAN10G3758' => 'fan', 'FAN11G1170' => 'fan', 'FAN11G2050' => 'fan', 'FAN11G2724' => 'fan', 'FAN12G1700' => 'fan', 'FAN12G2028' => 'fan', 'FAN15G1160' => 'fan', 'FAN15G3063' => 'fan', 'FAN16G2540' => 'fan', 'FAN16G3077' => 'fan', 'FAN16G3624' => 'fan', 'FAN17G0221' => 'fan', 'FAN20G2492' => 'fan', 'FAN20G2905' => 'fan', 'FAN21G0548' => 'fan', 'FAN21G1300' => 'fan', 'FAN22G0077' => 'fan', 'FAN22G1315' => 'fan', 'FAN24G1280' => 'fan', 'FAN24G1445' => 'fan', 'FAN24G3527' => 'fan', 'FAN25G0464' => 'fan', 'FAN25G2885' => 'fan', 'FAN25G3270' => 'fan', 'FAN27G1101' => 'fan', 'FAN27G2846' => 'fan', 'FAN27G3524' => 'fan', 'FvH4_2g11770' => 'fve', 'FvH4_2g15630' => 'fve', 'FvH4_3g05570' => 'fve', 'FvH4_3g09110' => 'fve', 'FvH4_3g19940' => 'fve', 'FvH4_4g04821' => 'fve', 'FvH4_4g31480' => 'fve', 'FvH4_7g01740' => 'fve', 'Glyma.05G130400' => 'gma', 'Glyma.05G156400' => 'gma', 'Glyma.07G197000' => 'gma', 'Glyma.08G085151' => 'gma', 'Glyma.08G114500' => 'gma', 'Glyma.08G300400' => 'gma', 'Glyma.10G215800' => 'gma', 'Glyma.12G224400' => 'gma', 'Glyma.13G179300' => 'gma', 'Glyma.13G218151' => 'gma', 'Glyma.13G238800' => 'gma', 'Glyma.13G276900' => 'gma', 'Glyma.14G078200' => 'gma', 'Glyma.15G074500' => 'gma', 'Glyma.15G094100' => 'gma', 'Glyma.17G247200' => 'gma', 'Glyma.18G120100' => 'gma', 'Glyma.20G176000' => 'gma', 'Gohir.A01G063600' => 'ghi', 'Gohir.A01G170301' => 'ghi', 'Gohir.A02G060500' => 'ghi', 'Gohir.A05G133850' => 'ghi', 'Gohir.A05G161400' => 'ghi', 'Gohir.A06G012900' => 'ghi', 'Gohir.A06G035901' => 'ghi', 'Gohir.A06G127100' => 'ghi', 'Gohir.A06G210500' => 'ghi', 'Gohir.A08G008650' => 'ghi', 'Gohir.A09G072700' => 'ghi', 'Gohir.A09G088301' => 'ghi', 'Gohir.A10G040600' => 'ghi', 'Gohir.A12G036300' => 'ghi', 'Gohir.A12G143350' => 'ghi', 'Gohir.A12G165500' => 'ghi', 'Gohir.A13G145700' => 'ghi', 'Gohir.D01G050000' => 'ghi', 'Gohir.D01G051366' => 'ghi', 'Gohir.D01G161350' => 'ghi', 'Gohir.D02G065900' => 'ghi', 'Gohir.D05G164200' => 'ghi', 'Gohir.D05G355500' => 'ghi', 'Gohir.D06G010400' => 'ghi', 'Gohir.D06G111250' => 'ghi', 'Gohir.D06G132000' => 'ghi', 'Gohir.D06G210500' => 'ghi', 'Gohir.D07G165675' => 'ghi', 'Gohir.D08G062240' => 'ghi', 'Gohir.D08G086101' => 'ghi', 'Gohir.D08G138060' => 'ghi', 'Gohir.D09G072300' => 'ghi', 'Gohir.D10G041400' => 'ghi', 'Gohir.D11G191020' => 'ghi', 'Gohir.D11G212066' => 'ghi', 'Gohir.D12G036300' => 'ghi', 'Gohir.D12G168600' => 'ghi', 'Gohir.D13G150600' => 'ghi', 'Gorai.001G057300' => 'gra', 'Gorai.002G069900' => 'gra', 'Gorai.002G200000' => 'gra', 'Gorai.003G067600' => 'gra', 'Gorai.005G074800' => 'gra', 'Gorai.006G087300' => 'gra', 'Gorai.008G037500' => 'gra', 'Gorai.008G181400' => 'gra', 'Gorai.009G169400' => 'gra', 'Gorai.009G387900' => 'gra', 'Gorai.010G013300' => 'gra', 'Gorai.010G153800' => 'gra', 'Gorai.010G255800' => 'gra', 'Gorai.011G043700' => 'gra', 'Gorai.011G198900' => 'gra', 'Gorai.013G168400' => 'gra', 'GSVIVG01005212001' => 'vvi', 'GSVIVG01006163001' => 'vvi', 'GSVIVG01009625001' => 'vvi', 'GSVIVG01014338001' => 'vvi', 'GSVIVG01020005001' => 'vvi', 'GSVIVG01021450001' => 'vvi', 'GSVIVG01023975001' => 'vvi', 'GSVIVG01034490001' => 'vvi', 'HanXRQChr04g0112071' => 'han', 'HanXRQChr05g0131151' => 'han', 'HanXRQChr09g0262371' => 'han', 'HanXRQChr09g0268401' => 'han', 'HanXRQChr10g0279241' => 'han', 'HanXRQChr10g0297961' => 'han', 'HanXRQChr11g0326231' => 'han', 'HanXRQChr11g0328471' => 'han', 'HanXRQChr16g0507941' => 'han', 'HanXRQChr17g0560211' => 'han', 'Haze_02108' => 'cav', 'Haze_02428' => 'cav', 'Haze_05593' => 'cav', 'Haze_06448' => 'cav', 'Haze_09427' => 'cav', 'Haze_12022' => 'cav', 'Haze_17612' => 'cav', 'Haze_17928' => 'cav', 'Hma1.2p1_0032F.1_g019250' => 'hma', 'Hma1.2p1_0163F.1_g072690' => 'hma', 'Hma1.2p1_0265F.1_g106710' => 'hma', 'Hma1.2p1_0286F.1_g113970' => 'hma', 'Hma1.2p1_0363F.1_g136640' => 'hma', 'Hma1.2p1_0584F.1_g183470' => 'hma', 'Hma1.2p1_0885F.1_g232570' => 'hma', 'HPP92_006022' => 'vpl', 'HPP92_007320' => 'vpl', 'HPP92_011521' => 'vpl', 'HPP92_019387' => 'vpl', 'HPP92_024038' => 'vpl', 'Hund05891' => 'sun', 'Hund06450' => 'sun', 'Hund12053' => 'sun', 'Hund16800' => 'sun', 'Hund21222' => 'sun', 'Hund22896' => 'sun', 'Hund23746' => 'sun', 'Hund27083' => 'sun', 'Lalb_Chr02g0141831' => 'lal', 'Lalb_Chr02g0141841' => 'lal', 'Lalb_Chr05g0220411' => 'lal', 'Lalb_Chr06g0162081' => 'lal', 'Lalb_Chr09g0327651' => 'lal', 'Lalb_Chr13g0295051' => 'lal', 'Lalb_Chr15g0086801' => 'lal', 'Lalb_Chr16g0383781' => 'lal', 'Lalb_Chr16g0383791' => 'lal', 'Lalb_Chr18g0055441' => 'lal', 'Lalb_Chr18g0059611' => 'lal', 'Lalb_Chr20g0109661' => 'lal', 'Lalb_Chr20g0109831' => 'lal', 'Lalb_Chr20g0121871' => 'lal', 'Lalb_Chr22g0355361' => 'lal', 'Lalb_Chr25g0286371' => 'lal', 'Lj1A1187G43' => 'lonja', 'Lj1A1205T50' => 'lonja', 'Lj1A800G33' => 'lonja', 'Lj1C1187T7' => 'lonja', 'Lj1C843T11' => 'lonja', 'Lj1g0010940' => 'lja', 'Lj2A288T69' => 'lonja', 'Lj3g0024276' => 'lja', 'Lj4A47T76' => 'lonja', 'Lj4g0005805' => 'lja', 'Lj4g0006097' => 'lja', 'Lj4g0008528' => 'lja', 'Lj4g0024907' => 'lja', 'Lj5g0012472' => 'lja', 'Lj5g0018648' => 'lja', 'Lj6C789G1' => 'lonja', 'Lj6g0004000' => 'lja', 'Lj7A292G67' => 'lonja', 'Lj7A292T64' => 'lonja', 'Lj9A400T58' => 'lonja', 'Lsat_1_v5_gn_1_126181' => 'lsa', 'Lsat_1_v5_gn_4_123041' => 'lsa', 'Lsat_1_v5_gn_4_133620' => 'lsa', 'Lsat_1_v5_gn_4_53221' => 'lsa', 'Lsat_1_v5_gn_4_71961' => 'lsa', 'Lsat_1_v5_gn_7_105241' => 'lsa', 'Lsat_1_v5_gn_7_21361' => 'lsa', 'Lsat_1_v5_gn_7_28860' => 'lsa', 'Lsat_1_v5_gn_7_31260' => 'lsa', 'Lsat_1_v5_gn_8_52801' => 'lsa', 'Manes.02G191400' => 'mes', 'Manes.03G110100' => 'mes', 'Manes.04G071100' => 'mes', 'Manes.05G100500' => 'mes', 'Manes.05G164700' => 'mes', 'Manes.15G087000' => 'mes', 'Manes.15G121500' => 'mes', 'Manes.16G028300' => 'mes', 'Manes.17G046100' => 'mes', 'Manes.17G069800' => 'mes', 'Manes.18G100500' => 'mes', 'Mapoly0002s0109' => 'mpo', 'Mapoly0024s0007' => 'mpo', 'Mapoly0089s0032' => 'mpo', 'MBI04_g42241_MAGBIO' => 'mbi', 'MBI05_g11988_MAGBIO' => 'mbi', 'MBI05_g35452_MAGBIO' => 'mbi', 'MBI07_g30179_MAGBIO' => 'mbi', 'MBI07_g35859_MAGBIO' => 'mbi', 'MBI07_g35860_MAGBIO' => 'mbi', 'MBI07_g37166_MAGBIO' => 'mbi', 'MBI08_g18172_MAGBIO' => 'mbi', 'MBI09_g08441_MAGBIO' => 'mbi', 'MBI13_g01676_MAGBIO' => 'mbi', 'MBI14_g42955_MAGBIO' => 'mbi', 'MBI16_g13161_MAGBIO' => 'mbi', 'MBI17_g27204_MAGBIO' => 'mbi', 'MBI19_g21595_MAGBIO' => 'mbi', 'MD00G1148400' => 'mdo', 'MD02G1301200' => 'mdo', 'MD03G1227800' => 'mdo', 'MD05G1041100' => 'mdo', 'MD05G1124800' => 'mdo', 'MD05G1284000' => 'mdo', 'MD05G1338800' => 'mdo', 'MD05G1338900' => 'mdo', 'MD07G1022800' => 'mdo', 'MD10G1047500' => 'mdo', 'MD10G1127500' => 'mdo', 'MD10G1262300' => 'mdo', 'MD10G1293800' => 'mdo', 'MD16G1074300' => 'mdo', 'Medtr1g021670' => 'mtr', 'Medtr1g096320' => 'mtr', 'Medtr2g013690' => 'mtr', 'Medtr2g019450' => 'mtr', 'Medtr2g085170' => 'mtr', 'Medtr4g088785' => 'mtr', 'Medtr8g055930' => 'mtr', 'Medtr8g085850' => 'mtr', 'MELO3C002605.2' => 'cme', 'MELO3C003891.2' => 'cme', 'MELO3C004012.2' => 'cme', 'MELO3C007134.2' => 'cme', 'MELO3C008118.2' => 'cme', 'MELO3C016700.2' => 'cme', 'MELO3C024127.2' => 'cme', 'MELO3C033361.2' => 'cme', 'MELO3C033362.2' => 'cme', 'Migut.C00430' => 'egut', 'Migut.C01246' => 'egut', 'Migut.E00101' => 'egut', 'Migut.H01486' => 'egut', 'Migut.H01939' => 'egut', 'Migut.K00360' => 'egut', 'Migut.M00910' => 'egut', 'Migut.M01139' => 'egut', 'Migut.N02677' => 'egut', 'MSTRG.13252' => 'ama', 'MSTRG.14701' => 'ama', 'MSTRG.1521' => 'ama', 'MSTRG.15884' => 'ama', 'MSTRG.16242' => 'ama', 'MSTRG.22285' => 'ama', 'MSTRG.22444' => 'ama', 'MSTRG.2349' => 'ama', 'MSTRG.26308' => 'ama', 'MSTRG.28296' => 'ama', 'MSTRG.9895' => 'ama', 'Nitab4.5_0000110g0060' => 'nta', 'Nitab4.5_0000420g0130' => 'nta', 'Nitab4.5_0000422g0030' => 'nta', 'Nitab4.5_0000560g0180' => 'nta', 'Nitab4.5_0000703g0100' => 'nta', 'Nitab4.5_0000786g0200' => 'nta', 'Nitab4.5_0001336g0020' => 'nta', 'Nitab4.5_0001796g0030' => 'nta', 'Nitab4.5_0003348g0060' => 'nta', 'Nitab4.5_0003698g0040' => 'nta', 'Nitab4.5_0003942g0090' => 'nta', 'Nitab4.5_0004775g0070' => 'nta', 'Nitab4.5_0004864g0030' => 'nta', 'Nitab4.5_0005615g0020' => 'nta', 'Nitab4.5_0009288g0030' => 'nta', 'Nitab4.5_0009341g0010' => 'nta', 'Nitab4.5_0009535g0010' => 'nta', 'Nn1g03995' => 'nnu', 'Nn1g04100' => 'nnu', 'Nn1g06530' => 'nnu', 'Nn3g16404' => 'nnu', 'Nn3g17212' => 'nnu', 'Nn3g20776' => 'nnu', 'Nn3g21923' => 'nnu', 'Nn5g27737' => 'nnu', 'Nn5g29461' => 'nnu', 'Nn7g38355' => 'nnu', 'Nn8g39873' => 'nnu', 'Oeu000548.2' => 'oeu', 'Oeu004672.1' => 'oeu', 'Oeu015605.2' => 'oeu', 'Oeu016092.1' => 'oeu', 'Oeu017879.3' => 'oeu', 'Oeu024910.1' => 'oeu', 'Oeu028965.1' => 'oeu', 'Oeu031269.1' => 'oeu', 'Oeu031270.1' => 'oeu', 'Oeu032535.1' => 'oeu', 'Oeu034151.1' => 'oeu', 'Oeu034152.1' => 'oeu', 'Oeu034588.2' => 'oeu', 'Oeu050846.1' => 'oeu', 'Oeu050849.2' => 'oeu', 'Oeu051063.2' => 'oeu', 'Oeu052368.1' => 'oeu', 'Oeu052370.1' => 'oeu', 'Os01g0210400' => 'osa', 'Os01g0304300' => 'osa', 'Os01g0749100' => 'osa', 'Os02g0745800' => 'osa', 'Os03g0769050' => 'osa', 'Os05g0531500' => 'osa', 'Os06g0724300' => 'osa', 'Os11g0198100' => 'osa', 'Peaxi162Scf00069g01425' => 'pax', 'Peaxi162Scf00280g00811' => 'pax', 'Peaxi162Scf00310g00615' => 'pax', 'Peaxi162Scf00362g00542' => 'pax', 'Peaxi162Scf00461g00310' => 'pax', 'Peaxi162Scf00530g00118' => 'pax', 'Peaxi162Scf00541g00057' => 'pax', 'Peaxi162Scf00661g00017' => 'pax', 'Peaxi162Scf00926g00027' => 'pax', 'Peaxi162Scf01064g00263' => 'pax', 'Peaxi162Scf01211g00135' => 'pax', 'PGR004G2336' => 'pgr', 'PGR042G0327' => 'pgr', 'PGR042G1957' => 'pgr', 'PGR042G2003' => 'pgr', 'PGR042G3929' => 'pgr', 'PGR083G1137' => 'pgr', 'PGR083G1364' => 'pgr', 'PGSC0003DMG400003381' => 'stu', 'PGSC0003DMG400003417' => 'stu', 'PGSC0003DMG400008981' => 'stu', 'PGSC0003DMG400012417' => 'stu', 'PGSC0003DMG400012823' => 'stu', 'PGSC0003DMG400016885' => 'stu', 'PGSC0003DMG400022812' => 'stu', 'PGSC0003DMG400029726' => 'stu', 'PGSC0003DMG401009243' => 'stu', 'PGSC0003DMG401031505' => 'stu', 'PGSC0003DMG402031505' => 'stu', 'Phvul.001G017600' => 'pvu', 'Phvul.002G193500' => 'pvu', 'Phvul.002G228900' => 'pvu', 'Phvul.002G236800' => 'pvu', 'Phvul.003G049500' => 'pvu', 'Phvul.005G072000' => 'pvu', 'Phvul.006G164800' => 'pvu', 'Phvul.006G185100' => 'pvu', 'Phvul.007G090000' => 'pvu', 'Potri.001G399800' => 'ptr', 'Potri.002G149900' => 'ptr', 'Potri.004G044100' => 'ptr', 'Potri.004G177600' => 'ptr', 'Potri.009G138000' => 'ptr', 'Potri.010G094000' => 'ptr', 'Potri.011G053000' => 'ptr', 'Potri.011G119300' => 'ptr', 'Potri.013G113700' => 'ptr', 'Potri.018G107800' => 'ptr', 'Potri.019G084100' => 'ptr', 'Pp3c14_23720' => 'ppa', 'Pp3c16_6340' => 'ppa', 'Pp3c23_13420' => 'ppa', 'Pp3c24_2740' => 'ppa', 'Pp3c25_860' => 'ppa', 'Pp3c8_21750' => 'ppa', 'Prupe.1G273000' => 'ppe', 'Prupe.1G273700' => 'ppe', 'Prupe.1G274100' => 'ppe', 'Prupe.2G023300' => 'ppe', 'Prupe.4G048000' => 'ppe', 'Prupe.4G080400' => 'ppe', 'Prupe.4G181200' => 'ppe', 'Prupe.8G056900' => 'ppe', 'Prupe.8G168700' => 'ppe', 'Psat1g189080' => 'psa', 'Psat1g204760' => 'psa', 'Psat4g175560' => 'psa', 'Psat4g177720' => 'psa', 'Psat5g244240' => 'psa', 'Psat6g010720' => 'psa', 'Psat6g187200' => 'psa', 'Psat7g072040' => 'psa', 'PSO017G3501' => 'pso', 'PSO063G2148' => 'pso', 'PSO063G5608' => 'pso', 'PSO210G6392' => 'pso', 'PSO541G2319' => 'pso', 'PSO541G2836' => 'pso', 'PSO541G4012' => 'pso', 'PSO541G6253' => 'pso', 'PSO675G0580' => 'pso', 'PSO675G0856' => 'pso', 'PSO675G5635' => 'pso', 'PSO675G9157' => 'pso', 'PSO832G1660' => 'pso', 'PSO832G1969' => 'pso', 'QL02p007186' => 'qlo', 'QL02p033904' => 'qlo', 'QL03p064391' => 'qlo', 'QL05p040593' => 'qlo', 'QL05p058242' => 'qlo', 'QL08p021825' => 'qlo', 'QL11p004981' => 'qlo', 'RcHm_v2.0_Chr1g0318301' => 'rch', 'RcHm_v2.0_Chr4g0418501' => 'rch', 'RcHm_v2.0_Chr4g0439971' => 'rch', 'RcHm_v2.0_Chr5g0008541' => 'rch', 'RcHm_v2.0_Chr5g0014101' => 'rch', 'RcHm_v2.0_Chr5g0014131' => 'rch', 'RcHm_v2.0_Chr5g0033621' => 'rch', 'RcHm_v2.0_Chr6g0272041' => 'rch', 'RcHm_v2.0_Chr6g0278831' => 'rch', 'Rhsim02G0130400' => 'rsi', 'Rhsim02G0171100' => 'rsi', 'Rhsim05G0053000' => 'rsi', 'Rhsim05G0053100' => 'rsi', 'Rhsim06G0096500' => 'rsi', 'Rhsim06G0096600' => 'rsi', 'Rhsim06G0199100' => 'rsi', 'Rhsim12G0062300' => 'rsi', 'Rhsim12G0062800' => 'rsi', 'Sabra02G0118600' => 'sbr', 'Sabra04G0027300' => 'sbr', 'Sabra04G0119500' => 'sbr', 'Sabra08G0112500' => 'sbr', 'Sabra11G0036800' => 'sbr', 'Sabra11G0103800' => 'sbr', 'Sabra13G0096300' => 'sbr', 'Sabra16G0262300' => 'sbr', 'Sabra18G0091700' => 'sbr', 'Sabra19G0095400' => 'sbr', 'SalBow6G3080' => 'sbo', 'SalBow7G1157' => 'sbo', 'SalBow7G2123' => 'sbo', 'SalBow7G2285' => 'sbo', 'SalBow7G3537' => 'sbo', 'SalBow8G2947' => 'sbo', 'SalBow8G4463' => 'sbo', 'SalBow8G5466' => 'sbo', 'Sc01g0001750' => 'sci', 'Sc02g0006640' => 'sci', 'Sc02g0006670' => 'sci', 'Sc04g0008220' => 'sci', 'Sc05g0006190' => 'sci', 'Sc08g0002760' => 'sci', 'Sc17g0006170' => 'sci', 'Sc22g0002050' => 'sci', 'Sc23g0001190' => 'sci', 'Sc24g0000980' => 'sci', 'Sed0006245' => 'sed', 'Sed0007543' => 'sed', 'Sed0009411' => 'sed', 'Sed0010765' => 'sed', 'Sed0012944' => 'sed', 'Sed0014682' => 'sed', 'Sed0016174' => 'sed', 'Sed0016796' => 'sed', 'Sed0020317' => 'sed', 'Sed0021467' => 'sed', 'SEGI_01316' => 'sgi', 'SEGI_03374' => 'sgi', 'SEGI_16265' => 'sgi', 'SEGI_18569' => 'sgi', 'SEGI_20351' => 'sgi', 'SEGI_26395' => 'sgi', 'SEGI_29469' => 'sgi', 'SEGI_34771' => 'sgi', 'SEGI_36769' => 'sgi', 'SEGI_37139' => 'sgi', 'SGA_v2.0_scaffold100G29687' => 'sas', 'SGA_v2.0_scaffold118G32472' => 'sas', 'SGA_v2.0_scaffold14G07051' => 'sas', 'SGA_v2.0_scaffold183G39845' => 'sas', 'SGA_v2.0_scaffold1G00174' => 'sas', 'SGA_v2.0_scaffold22G09714' => 'sas', 'SGA_v2.0_scaffold333G48992' => 'sas', 'SGA_v2.0_scaffold46G17491' => 'sas', 'SGA_v2.0_scaffold49G18294' => 'sas', 'SGA_v2.0_scaffold63G21658' => 'sas', 'SHI01741' => 'shi', 'SHI05771' => 'shi', 'SHI18077' => 'shi', 'SHI20525' => 'shi', 'SHI20527' => 'shi', 'SHI20528' => 'shi', 'SMO172G0185' => 'smo', 'SMO198G0020' => 'smo', 'SMO351G0006' => 'smo', 'SMO356G0118' => 'smo', 'SMO358G0296' => 'smo', 'SMO367G0079' => 'smo', 'SMO367G1277' => 'smo', 'Solyc01g014220.3' => 'sly', 'Solyc01g111770.2' => 'sly', 'Solyc02g078180.3' => 'sly', 'Solyc03g006430.3' => 'sly', 'Solyc03g006456.1' => 'sly', 'Solyc03g079860.2' => 'sly', 'Solyc04g079770.3' => 'sly', 'Solyc05g007430.4' => 'sly', 'Solyc07g063150.3' => 'sly', 'Solyc08g016620.3' => 'sly', 'Solyc09g057590.3' => 'sly', 'Solyc09g057600.1' => 'sly', 'Solyc10g009050.3' => 'sly', 'Solyc11g017420.2' => 'sly', 'Sopen01g053810' => 'spe', 'Sopen02g023040' => 'spe', 'Sopen03g002440' => 'spe', 'Sopen04g033350' => 'spe', 'Sopen05g003310' => 'spe', 'Sopen07g004050' => 'spe', 'Sopen07g031340' => 'spe', 'Sopen08g006990' => 'spe', 'Sopen10g004830' => 'spe', 'Sopen11g009370' => 'spe', 'Sp1g24450' => 'spa', 'Sp1g29670' => 'spa', 'Sp1g39600' => 'spa', 'Sp2g11080' => 'spa', 'Sp2g13970' => 'spa', 'Sp4g16130' => 'spa', 'Sp6g13080' => 'spa', 'Sp7g37270' => 'spa', 'TAR371G0065' => 'tar', 'TAR376G0340' => 'tar', 'TAR376G0435' => 'tar', 'TAR381G0002' => 'tar', 'TAR381G1236' => 'tar', 'TAR624G0055' => 'tar', 'TAR624G0324' => 'tar', 'TAR624G0696' => 'tar', 'TAR624G0906' => 'tar', 'TAR625G0107' => 'tar', 'TAR626G0015' => 'tar', 'TAR626G1356' => 'tar', 'TAR627G0888' => 'tar', 'TAR628G0399' => 'tar', 'TAR628G1327' => 'tar', 'TAR629G2831' => 'tar', 'TAR629G2874' => 'tar', 'TAR633G1432' => 'tar', 'TAR633G2771' => 'tar', 'THA.LOC104803394' => 'tha', 'THA.LOC104805153' => 'tha', 'THA.LOC104806784' => 'tha', 'THA.LOC104810473' => 'tha', 'THA.LOC104813100' => 'tha', 'THA.LOC104814215' => 'tha', 'THA.LOC104815554' => 'tha', 'THA.LOC104820544' => 'tha', 'THA.LOC104824754' => 'tha', 'THA.LOC104827717' => 'tha', 'Thecc.02G031400' => 'tca', 'Thecc.02G055900' => 'tca', 'Thecc.02G350800' => 'tca', 'Thecc.06G150900' => 'tca', 'Thecc.06G186600' => 'tca', 'Thecc.07G089600' => 'tca', 'Thecc.08G020400' => 'tca', 'Thecc.08G182100' => 'tca', 'Thhalv10000873m.g' => 'esa', 'Thhalv10004185m.g' => 'esa', 'Thhalv10006981m.g' => 'esa', 'Thhalv10007204m.g' => 'esa', 'Thhalv10011374m.g' => 'esa', 'Thhalv10013482m.g' => 'esa', 'Thhalv10017801m.g' => 'esa', 'Thhalv10024983m.g' => 'esa', 'TPR.G12072' => 'tpr', 'TPR.G15769' => 'tpr', 'TPR.G16504' => 'tpr', 'TPR.G16506' => 'tpr', 'TPR.G24345' => 'tpr', 'TPR.G26666' => 'tpr', 'TPR.G27320' => 'tpr', 'TPR.G31819' => 'tpr', 'TPR.G38879' => 'tpr', 'TPR.G39015' => 'tpr', 'TPR.G8819' => 'tpr', 'TWI09G0924' => 'twi', 'TWI12G0811' => 'twi', 'TWI12G1294' => 'twi', 'TWI31G0150' => 'twi', 'TWI36G1262' => 'twi', 'TWI38G1287' => 'twi', 'TWI38G1633' => 'twi', 'TWI38G1982' => 'twi', 'TWI39G0116' => 'twi', 'TWI60G1011' => 'twi', 'TWI63G0171' => 'twi', 'TWI73G0839' => 'twi', 'TWI79G1511' => 'twi', 'unitig_0.g915' => 'ugi', 'unitig_0.g916' => 'ugi', 'unitig_21.g20219' => 'ugi', 'unitig_21.g20416' => 'ugi', 'unitig_578.g16132' => 'ugi', 'unitig_578.g16718' => 'ugi', 'unitig_62.g23481' => 'ugi', 'unitig_744.g24535' => 'ugi', 'unitig_749.g13525' => 'ugi', 'vmacro01248' => 'vma', 'vmacro02290' => 'vma', 'vmacro10946' => 'vma', 'vmacro11865' => 'vma', 'vmacro12493' => 'vma', 'vmacro17322' => 'vma', 'vmacro21599' => 'vma', 'vmacro23041' => 'vma', 'VMungo0251G0004' => 'vmu', 'VMungo0251G2639' => 'vmu', 'VMungo0251G2967' => 'vmu', 'VMungo0540G0864' => 'vmu', 'VMungo0540G1569' => 'vmu', 'VMungo0647G0317' => 'vmu', 'VMungo0720G1373' => 'vmu', 'VMungo0720G1508' => 'vmu', 'VMungo1080G0485' => 'vmu', 'VMungo1215G3177' => 'vmu', 'Zm00001eb112600' => 'zma', 'Zm00001eb120220' => 'zma', 'Zm00001eb153240' => 'zma', 'Zm00001eb168880' => 'zma', 'Zm00001eb213920' => 'zma', 'Zm00001eb228280' => 'zma', 'Zm00001eb254580' => 'zma', 'Zm00001eb272180' => 'zma', 'Zm00001eb293190' => 'zma', 'Zm00001eb322930' => 'zma', 'Zm00001eb353360' => 'zma', 'Zm00001eb353390' => 'zma', 'Zm00001eb353430' => 'zma', 'Zm00001eb353440' => 'zma', 'Zm00001eb353780' => 'zma' ) $gf_id = 'HOM05D000499' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000499' ) $data_identifier = 'HOM05D000499' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 29, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 12, 'amhyb' => (int) 8, 'aly' => (int) 12, 'aox' => (int) 9, 'arhy' => (int) 26, 'ath' => (int) 8, 'atr' => (int) 7, 'acertr' => (int) 10, 'cqu' => (int) 15, 'bca' => (int) 29, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 11, 'cansat' => (int) 8, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 9, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 8, 'cpa' => (int) 10, 'csa' => (int) 7, 'camsi' => (int) 20, 'dca' => (int) 8, 'din' => (int) 12, 'dzi' => (int) 14, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 6, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 38, 'gra' => (int) 16, 'vvi' => (int) 8, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 5, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 11, 'lja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 11, 'mpo' => (int) 3, 'mbi' => (int) 14, 'mdo' => (int) 14, 'mtr' => (int) 8, 'cme' => (int) 9, 'egut' => (int) 9, 'ama' => (int) 11, 'nta' => (int) 17, 'nnu' => (int) 11, 'oeu' => (int) 18, 'osa' => (int) 8, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 6, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 9, 'rsi' => (int) 9, 'sbr' => (int) 10, 'sbo' => (int) 8, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 10, 'sas' => (int) 10, 'shi' => (int) 6, 'smo' => (int) 7, 'sly' => (int) 14, 'spe' => (int) 10, 'spa' => (int) 8, 'tar' => (int) 19, 'tha' => (int) 10, 'tca' => (int) 8, 'esa' => (int) 8, 'tpr' => (int) 11, 'twi' => (int) 13, 'ugi' => (int) 9, 'vma' => (int) 8, 'vmu' => (int) 10, 'zma' => (int) 15 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb353780' $species_info = array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ) $local_species = 'tca' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000499', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1066', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p29780' => 'bna', 'A02p33180' => 'bna', 'A03p16470' => 'bna', 'A03p66010' => 'bna', 'A04p25970' => 'bna', 'A06p01270' => 'bna', 'A06p46080' => 'bna', 'A07p11400' => 'bna', 'A08p01840' => 'bna', 'A08p08230' => 'bna', 'A08p25740' => 'bna', 'A09p32070' => 'bna', 'A09p37830' => 'bna', 'A09p42840' => 'bna', 'A09p42850' => 'bna', 'Aa31LG10G2060' => 'aar', 'Aa31LG2G7410' => 'aar', 'Aa31LG6G10200' => 'aar', 'Aa31LG6G16680' => 'aar', 'Aa31LG6G8470' => 'aar', 'Aa31LG9G12730' => 'aar', 'Aa31LG9G13680' => 'aar', 'Aa31LG9G14920' => 'aar', 'Aa31LG9G6650' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4977' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5467' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3254' => 'aag', 'Actinidia02578' => 'ach', 'Actinidia07693' => 'ach', 'Actinidia08413' => 'ach', 'Actinidia08414' => 'ach', 'Actinidia15289' => 'ach', 'Actinidia19871' => 'ach', 'Actinidia21475' => 'ach', 'Actinidia22576' => 'ach', 'Actinidia28327' => 'ach', 'Actinidia32491' => 'ach', 'Actinidia39463' => 'ach', 'Actinidia39571' => 'ach', 'Ah.01g013750' => 'amhyb', 'Ah.01g023210' => 'amhyb', 'Ah.04g164850' => 'amhyb', 'Ah.05g178060' => 'amhyb', 'Ah.07g204270' => 'amhyb', 'Ah.07g208480' => 'amhyb', 'Ah.09g237410' => 'amhyb', 'Ah.14g089460' => 'amhyb', 'AL1G41790' => 'aly', 'AL1G49050' => 'aly', 'AL1G53810' => 'aly', 'AL1G61400' => 'aly', 'AL4G18580' => 'aly', 'AL5G12510' => 'aly', 'AL5G12540' => 'aly', 'AL6G43230' => 'aly', 'AL7G10370' => 'aly', 'AL7G19250' => 'aly', 'AL8G12240' => 'aly', 'AL8G18540' => 'aly', 'Aqoxy1G02409' => 'aox', 'Aqoxy2G03993' => 'aox', 'Aqoxy3G03357' => 'aox', 'Aqoxy4G00785' => 'aox', 'Aqoxy5G02598' => 'aox', 'Aqoxy6G00132' => 'aox', 'Aqoxy7G01776' => 'aox', 'Aqoxy7G02316' => 'aox', 'Aqoxy7G03973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.12AFKW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B8730' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27IQR1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3F75VG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3RE0GA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41TCQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.527VTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FIR39' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5W8UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DA38EV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ63HS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H1I32C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HC27T5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4M8AP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7N3CZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9UVDZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LS1NQA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT1D4B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SKC4TM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCFV76' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF9Q1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQWD9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1ZM88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WE07RT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YCK7VH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJE6Q6' => 'arhy', 'AT1G28240' => 'ath', 'AT1G34550' => 'ath', 'AT1G53040' => 'ath', 'AT2G02910' => 'ath', 'AT4G09630' => 'ath', 'AT4G38500' => 'ath', 'AT5G42660' => 'ath', 'AT5G46220' => 'ath', 'ATR0152G026' => 'atr', 'ATR0564G343' => 'atr', 'ATR0706G151' => 'atr', 'ATR0733G207' => 'atr', 'ATR0751G234' => 'atr', 'ATR0807G048' => 'atr', 'ATR1091G084' => 'atr', 'Atru.chr10.1229' => 'acertr', 'Atru.chr10.1230' => 'acertr', 'Atru.chr10.1874' => 'acertr', 'Atru.chr11.1808' => 'acertr', 'Atru.chr13.1795' => 'acertr', 'Atru.chr13.570' => 'acertr', 'Atru.chr2.2608' => 'acertr', 'Atru.chr2.2609' => 'acertr', 'Atru.chr5.3428' => 'acertr', 'Atru.chr8.1171' => 'acertr', 'AUR62004651' => 'cqu', 'AUR62008675' => 'cqu', 'AUR62010014' => 'cqu', 'AUR62013004' => 'cqu', 'AUR62014825' => 'cqu', 'AUR62015015' => 'cqu', 'AUR62015151' => 'cqu', 'AUR62017020' => 'cqu', 'AUR62019422' => 'cqu', 'AUR62023570' => 'cqu', 'AUR62025571' => 'cqu', 'AUR62029098' => 'cqu', 'AUR62033863' => 'cqu', 'AUR62034296' => 'cqu', 'AUR62040075' => 'cqu', 'BcaB02g07334' => 'bca', 'BcaB02g10575' => 'bca', 'BcaB03g12119' => 'bca', 'BcaB03g12120' => 'bca', 'BcaB03g13945' => 'bca', 'BcaB04g17123' => 'bca', 'BcaB04g17867' => 'bca', 'BcaB04g19839' => 'bca', 'BcaB07g30317' => 'bca', 'BcaB07g32432' => 'bca', 'BcaB07g33362' => 'bca', 'BcaB08g36611' => 'bca', 'BcaC01g00028' => 'bca', 'BcaC01g01356' => 'bca', 'BcaC01g02034' => 'bca', 'BcaC01g06051' => 'bca', 'BcaC03g16839' => 'bca', 'BcaC03g17176' => 'bca', 'BcaC05g26829' => 'bca', 'BcaC06g31490' => 'bca', 'BcaC06g35344' => 'bca', 'BcaC06g36570' => 'bca', 'BcaC07g37537' => 'bca', 'BcaC08g43491' => 'bca', 'BcaC08g43773' => 'bca', 'BcaNung00234' => 'bca', 'BcaNung01982' => 'bca', 'BcaNung03707' => 'bca', 'BcaNung06454' => 'bca', 'BolC2t10762H' => 'bol', 'BolC2t11191H' => 'bol', 'BolC3t14322H' => 'bol', 'BolC3t19747H' => 'bol', 'BolC3t21425H' => 'bol', 'BolC4t27800H' => 'bol', 'BolC5t31423H' => 'bol', 'BolC6t35951H' => 'bol', 'BolC6t36282H' => 'bol', 'BolC7t40678H' => 'bol', 'BolC7t40679H' => 'bol', 'BolC7t42222H' => 'bol', 'BolC7t43492H' => 'bol', 'BolC7t46785H' => 'bol', 'BolC8t47853H' => 'bol', 'BolC9t56805H' => 'bol', 'BraA02t08000Z' => 'bra', 'BraA02t08341Z' => 'bra', 'BraA03t10936Z' => 'bra', 'BraA03t15657Z' => 'bra', 'BraA04t18100Z' => 'bra', 'BraA05t20523Z' => 'bra', 'BraA06t23353Z' => 'bra', 'BraA06t27473Z' => 'bra', 'BraA06t27769Z' => 'bra', 'BraA07t28928Z' => 'bra', 'BraA08t32236Z' => 'bra', 'BraA08t32841Z' => 'bra', 'BraA08t34524Z' => 'bra', 'BraA09t38742Z' => 'bra', 'BraA09t39295Z' => 'bra', 'C02p47180' => 'bna', 'C02p50990' => 'bna', 'C03p19360' => 'bna', 'C03p74950' => 'bna', 'C03p91000' => 'bna', 'C04p63260' => 'bna', 'C05p27050' => 'bna', 'C06p08750' => 'bna', 'C06p11490' => 'bna', 'C07p02820' => 'bna', 'C07p17180' => 'bna', 'C07p29440' => 'bna', 'C07p63730' => 'bna', 'C09p39260' => 'bna', 'CAN.G1164.34' => 'can', 'CAN.G1164.39' => 'can', 'CAN.G1530.3' => 'can', 'CAN.G162.61' => 'can', 'CAN.G176.6' => 'can', 'CAN.G289.49' => 'can', 'CAN.G370.21' => 'can', 'CAN.G370.22' => 'can', 'CAN.G371.117' => 'can', 'CAN.G58.37' => 'can', 'CAN.G588.98' => 'can', 'CANSAT21G2266' => 'cansat', 'CANSAT25G2799' => 'cansat', 'CANSAT35G0862' => 'cansat', 'CANSAT35G1704' => 'cansat', 'CANSAT35G1760' => 'cansat', 'CANSAT56G3971' => 'cansat', 'CANSAT56G4116' => 'cansat', 'CANSAT80G1259' => 'cansat', 'CARHR027730' => 'chi', 'CARHR033880' => 'chi', 'CARHR043270' => 'chi', 'CARHR145330' => 'chi', 'CARHR145340' => 'chi', 'CARHR175570' => 'chi', 'CARHR181570' => 'chi', 'CARHR258470' => 'chi', 'CARHR260490' => 'chi', 'CARHR294220' => 'chi', 'Carub.0001s2668' => 'cru', 'Carub.0001s3257' => 'cru', 'Carub.0001s4220' => 'cru', 'Carub.0005s0179' => 'cru', 'Carub.0006s2807' => 'cru', 'Carub.0007s0039' => 'cru', 'Carub.0008s0169' => 'cru', 'Carub.0008s0636' => 'cru', 'Ca_00338_v3' => 'car', 'Ca_00542_v3' => 'car', 'Ca_01844_v3' => 'car', 'Ca_10611_v3' => 'car', 'Ca_13326_v3' => 'car', 'Ca_17944_v3' => 'car', 'Ca_18546_v3' => 'car', 'Ca_24219_v3' => 'car', 'Ca_29972_v3' => 'car', 'CBR_g3681' => 'cbr', 'CBR_g40021' => 'cbr', 'Cc01_g08140' => 'ccan', 'Cc02_g13410' => 'ccan', 'Cc02_g37480' => 'ccan', 'Cc05_g12030' => 'ccan', 'Cc09_g03370' => 'ccan', 'Cc09_g10300' => 'ccan', 'Cc10_g03530' => 'ccan', 'Cc10_g11380' => 'ccan', 'CDE01G0176' => 'cde', 'CDE02G0675' => 'cde', 'CDE02G0942' => 'cde', 'CDE02G1153' => 'cde', 'CDE02G4177' => 'cde', 'CDE04G2117' => 'cde', 'CDE04G2736' => 'cde', 'CDE08G1161' => 'cde', 'CDE09G1238' => 'cde', 'Cfa000467' => 'cfa', 'Cfa000947' => 'cfa', 'Cfa004969' => 'cfa', 'Cfa005284' => 'cfa', 'Cfa008993' => 'cfa', 'Cfa018187' => 'cfa', 'Cfa018454' => 'cfa', 'Cfa020585' => 'cfa', 'Ciclev10000424m.g' => 'ccl', 'Ciclev10003605m.g' => 'ccl', 'Ciclev10007828m.g' => 'ccl', 'Ciclev10014620m.g' => 'ccl', 'Ciclev10015169m.g' => 'ccl', 'Ciclev10018291m.g' => 'ccl', 'Ciclev10028256m.g' => 'ccl', 'Ciclev10033822m.g' => 'ccl', 'CiPaw.05G060300' => 'cil', 'CiPaw.05G085000' => 'cil', 'CiPaw.06G083700' => 'cil', 'CiPaw.06G120300' => 'cil', 'CiPaw.09G060500' => 'cil', 'CiPaw.09G123800' => 'cil', 'CiPaw.11G169700' => 'cil', 'CiPaw.12G118300' => 'cil', 'CiPaw.15G071000' => 'cil', 'CiPaw.15G081900' => 'cil', 'ClCG01G024610' => 'cla', 'ClCG03G006070' => 'cla', 'ClCG05G019250' => 'cla', 'ClCG09G009500' => 'cla', 'ClCG11G008200' => 'cla', 'ClCG11G018080' => 'cla', 'COL.COLO4_17373' => 'col', 'COL.COLO4_22994' => 'col', 'COL.COLO4_26389' => 'col', 'COL.COLO4_27170' => 'col', 'COL.COLO4_31074' => 'col', 'COL.COLO4_31465' => 'col', 'COL.COLO4_36438' => 'col', 'COL.COLO4_36439' => 'col', 'Cpa.g.c38781' => 'cpa', 'Cpa.g.sc128.12' => 'cpa', 'Cpa.g.sc166.7' => 'cpa', 'Cpa.g.sc166.8' => 'cpa', 'Cpa.g.sc20.111' => 'cpa', 'Cpa.g.sc27.31' => 'cpa', 'Cpa.g.sc64.36' => 'cpa', 'Cpa.g.sc64.37' => 'cpa', 'Cpa.g.sc66.49' => 'cpa', 'Cpa.g.sc80.64' => 'cpa', 'CsaV3_1G012320' => 'csa', 'CsaV3_2G008480' => 'csa', 'CsaV3_2G033450' => 'csa', 'CsaV3_3G044830' => 'csa', 'CsaV3_4G033710' => 'csa', 'CsaV3_6G051730' => 'csa', 'CsaV3_7G025350' => 'csa', 'CSS0001067' => 'camsi', 'CSS0005996' => 'camsi', 'CSS0006590' => 'camsi', 'CSS0009673' => 'camsi', 'CSS0010201' => 'camsi', 'CSS0010549' => 'camsi', 'CSS0011364' => 'camsi', 'CSS0014473' => 'camsi', 'CSS0014961' => 'camsi', 'CSS0020191' => 'camsi', 'CSS0021165' => 'camsi', 'CSS0022306' => 'camsi', 'CSS0030591' => 'camsi', 'CSS0030696' => 'camsi', 'CSS0032653' => 'camsi', 'CSS0037487' => 'camsi', 'CSS0041102' => 'camsi', 'CSS0041261' => 'camsi', 'CSS0046246' => 'camsi', 'CSS0049256' => 'camsi', 'DCAR_004075' => 'dca', 'DCAR_011538' => 'dca', 'DCAR_019553' => 'dca', 'DCAR_020952' => 'dca', 'DCAR_021739' => 'dca', 'DCAR_027407' => 'dca', 'DCAR_027913' => 'dca', 'DCAR_028066' => 'dca', 'Dinv05899' => 'din', 'Dinv07563' => 'din', 'Dinv08010' => 'din', 'Dinv14125' => 'din', 'Dinv20172' => 'din', 'Dinv30743' => 'din', 'Dinv31229' => 'din', 'Dinv34162' => 'din', 'Dinv36028' => 'din', 'Dinv39368' => 'din', 'Dinv40565' => 'din', 'Dinv41706' => 'din', 'Duzib052G0089' => 'dzi', 'Duzib116G0641' => 'dzi', 'Duzib132G0069' => 'dzi', 'Duzib132G1219' => 'dzi', 'Duzib147G0278' => 'dzi', 'Duzib160G0480' => 'dzi', 'Duzib170G0661' => 'dzi', 'Duzib177G0591' => 'dzi', 'Duzib187G1353' => 'dzi', 'Duzib192G0858' => 'dzi', 'Duzib192G0883' => 'dzi', 'Duzib213G0506' => 'dzi', 'Duzib235G0289' => 'dzi', 'Duzib251G0422' => 'dzi', 'ECA232G3898' => 'eca', 'ECA233G5950' => 'eca', 'ECA234G1699' => 'eca', 'ECA234G2421' => 'eca', 'ECA236G0426' => 'eca', 'ECA236G4331' => 'eca', 'ECA248G2573' => 'eca', 'EL10Ac1g00077' => 'bvu', 'EL10Ac1g01746' => 'bvu', 'EL10Ac2g03464' => 'bvu', 'EL10Ac4g08176' => 'bvu', 'EL10Ac7g17521' => 'bvu', 'EL10Ac8g20386' => 'bvu', 'EL10Ac9g21343' => 'bvu', 'EL10Ac9g22688' => 'bvu', 'Eucgr.B03434' => 'egr', 'Eucgr.D00618' => 'egr', 'Eucgr.E02395' => 'egr', 'Eucgr.F01129' => 'egr', 'Eucgr.F02622' => 'egr', 'Eucgr.F04207' => 'egr', 'FAN01G0570' => 'fan', 'FAN03G3351' => 'fan', 'FAN06G3702' => 'fan', 'FAN07G2149' => 'fan', 'FAN10G3758' => 'fan', 'FAN11G1170' => 'fan', 'FAN11G2050' => 'fan', 'FAN11G2724' => 'fan', 'FAN12G1700' => 'fan', 'FAN12G2028' => 'fan', 'FAN15G1160' => 'fan', 'FAN15G3063' => 'fan', 'FAN16G2540' => 'fan', 'FAN16G3077' => 'fan', 'FAN16G3624' => 'fan', 'FAN17G0221' => 'fan', 'FAN20G2492' => 'fan', 'FAN20G2905' => 'fan', 'FAN21G0548' => 'fan', 'FAN21G1300' => 'fan', 'FAN22G0077' => 'fan', 'FAN22G1315' => 'fan', 'FAN24G1280' => 'fan', 'FAN24G1445' => 'fan', 'FAN24G3527' => 'fan', 'FAN25G0464' => 'fan', 'FAN25G2885' => 'fan', 'FAN25G3270' => 'fan', 'FAN27G1101' => 'fan', 'FAN27G2846' => 'fan', 'FAN27G3524' => 'fan', 'FvH4_2g11770' => 'fve', 'FvH4_2g15630' => 'fve', 'FvH4_3g05570' => 'fve', 'FvH4_3g09110' => 'fve', 'FvH4_3g19940' => 'fve', 'FvH4_4g04821' => 'fve', 'FvH4_4g31480' => 'fve', 'FvH4_7g01740' => 'fve', 'Glyma.05G130400' => 'gma', 'Glyma.05G156400' => 'gma', 'Glyma.07G197000' => 'gma', 'Glyma.08G085151' => 'gma', 'Glyma.08G114500' => 'gma', 'Glyma.08G300400' => 'gma', 'Glyma.10G215800' => 'gma', 'Glyma.12G224400' => 'gma', 'Glyma.13G179300' => 'gma', 'Glyma.13G218151' => 'gma', 'Glyma.13G238800' => 'gma', 'Glyma.13G276900' => 'gma', 'Glyma.14G078200' => 'gma', 'Glyma.15G074500' => 'gma', 'Glyma.15G094100' => 'gma', 'Glyma.17G247200' => 'gma', 'Glyma.18G120100' => 'gma', 'Glyma.20G176000' => 'gma', 'Gohir.A01G063600' => 'ghi', 'Gohir.A01G170301' => 'ghi', 'Gohir.A02G060500' => 'ghi', 'Gohir.A05G133850' => 'ghi', 'Gohir.A05G161400' => 'ghi', 'Gohir.A06G012900' => 'ghi', 'Gohir.A06G035901' => 'ghi', 'Gohir.A06G127100' => 'ghi', 'Gohir.A06G210500' => 'ghi', 'Gohir.A08G008650' => 'ghi', 'Gohir.A09G072700' => 'ghi', 'Gohir.A09G088301' => 'ghi', 'Gohir.A10G040600' => 'ghi', 'Gohir.A12G036300' => 'ghi', 'Gohir.A12G143350' => 'ghi', 'Gohir.A12G165500' => 'ghi', 'Gohir.A13G145700' => 'ghi', 'Gohir.D01G050000' => 'ghi', 'Gohir.D01G051366' => 'ghi', 'Gohir.D01G161350' => 'ghi', 'Gohir.D02G065900' => 'ghi', 'Gohir.D05G164200' => 'ghi', 'Gohir.D05G355500' => 'ghi', 'Gohir.D06G010400' => 'ghi', 'Gohir.D06G111250' => 'ghi', 'Gohir.D06G132000' => 'ghi', 'Gohir.D06G210500' => 'ghi', 'Gohir.D07G165675' => 'ghi', 'Gohir.D08G062240' => 'ghi', 'Gohir.D08G086101' => 'ghi', 'Gohir.D08G138060' => 'ghi', 'Gohir.D09G072300' => 'ghi', 'Gohir.D10G041400' => 'ghi', 'Gohir.D11G191020' => 'ghi', 'Gohir.D11G212066' => 'ghi', 'Gohir.D12G036300' => 'ghi', 'Gohir.D12G168600' => 'ghi', 'Gohir.D13G150600' => 'ghi', 'Gorai.001G057300' => 'gra', 'Gorai.002G069900' => 'gra', 'Gorai.002G200000' => 'gra', 'Gorai.003G067600' => 'gra', 'Gorai.005G074800' => 'gra', 'Gorai.006G087300' => 'gra', 'Gorai.008G037500' => 'gra', 'Gorai.008G181400' => 'gra', 'Gorai.009G169400' => 'gra', 'Gorai.009G387900' => 'gra', 'Gorai.010G013300' => 'gra', 'Gorai.010G153800' => 'gra', 'Gorai.010G255800' => 'gra', 'Gorai.011G043700' => 'gra', 'Gorai.011G198900' => 'gra', 'Gorai.013G168400' => 'gra', 'GSVIVG01005212001' => 'vvi', 'GSVIVG01006163001' => 'vvi', 'GSVIVG01009625001' => 'vvi', 'GSVIVG01014338001' => 'vvi', 'GSVIVG01020005001' => 'vvi', 'GSVIVG01021450001' => 'vvi', 'GSVIVG01023975001' => 'vvi', 'GSVIVG01034490001' => 'vvi', 'HanXRQChr04g0112071' => 'han', 'HanXRQChr05g0131151' => 'han', 'HanXRQChr09g0262371' => 'han', 'HanXRQChr09g0268401' => 'han', 'HanXRQChr10g0279241' => 'han', 'HanXRQChr10g0297961' => 'han', 'HanXRQChr11g0326231' => 'han', 'HanXRQChr11g0328471' => 'han', 'HanXRQChr16g0507941' => 'han', 'HanXRQChr17g0560211' => 'han', 'Haze_02108' => 'cav', 'Haze_02428' => 'cav', 'Haze_05593' => 'cav', 'Haze_06448' => 'cav', 'Haze_09427' => 'cav', 'Haze_12022' => 'cav', 'Haze_17612' => 'cav', 'Haze_17928' => 'cav', 'Hma1.2p1_0032F.1_g019250' => 'hma', 'Hma1.2p1_0163F.1_g072690' => 'hma', 'Hma1.2p1_0265F.1_g106710' => 'hma', 'Hma1.2p1_0286F.1_g113970' => 'hma', 'Hma1.2p1_0363F.1_g136640' => 'hma', 'Hma1.2p1_0584F.1_g183470' => 'hma', 'Hma1.2p1_0885F.1_g232570' => 'hma', 'HPP92_006022' => 'vpl', 'HPP92_007320' => 'vpl', 'HPP92_011521' => 'vpl', 'HPP92_019387' => 'vpl', 'HPP92_024038' => 'vpl', 'Hund05891' => 'sun', 'Hund06450' => 'sun', 'Hund12053' => 'sun', 'Hund16800' => 'sun', 'Hund21222' => 'sun', 'Hund22896' => 'sun', 'Hund23746' => 'sun', 'Hund27083' => 'sun', 'Lalb_Chr02g0141831' => 'lal', 'Lalb_Chr02g0141841' => 'lal', 'Lalb_Chr05g0220411' => 'lal', 'Lalb_Chr06g0162081' => 'lal', 'Lalb_Chr09g0327651' => 'lal', 'Lalb_Chr13g0295051' => 'lal', 'Lalb_Chr15g0086801' => 'lal', 'Lalb_Chr16g0383781' => 'lal', 'Lalb_Chr16g0383791' => 'lal', 'Lalb_Chr18g0055441' => 'lal', 'Lalb_Chr18g0059611' => 'lal', 'Lalb_Chr20g0109661' => 'lal', 'Lalb_Chr20g0109831' => 'lal', 'Lalb_Chr20g0121871' => 'lal', 'Lalb_Chr22g0355361' => 'lal', 'Lalb_Chr25g0286371' => 'lal', 'Lj1A1187G43' => 'lonja', 'Lj1A1205T50' => 'lonja', 'Lj1A800G33' => 'lonja', 'Lj1C1187T7' => 'lonja', 'Lj1C843T11' => 'lonja', 'Lj1g0010940' => 'lja', 'Lj2A288T69' => 'lonja', 'Lj3g0024276' => 'lja', 'Lj4A47T76' => 'lonja', 'Lj4g0005805' => 'lja', 'Lj4g0006097' => 'lja', 'Lj4g0008528' => 'lja', 'Lj4g0024907' => 'lja', 'Lj5g0012472' => 'lja', 'Lj5g0018648' => 'lja', 'Lj6C789G1' => 'lonja', 'Lj6g0004000' => 'lja', 'Lj7A292G67' => 'lonja', 'Lj7A292T64' => 'lonja', 'Lj9A400T58' => 'lonja', 'Lsat_1_v5_gn_1_126181' => 'lsa', 'Lsat_1_v5_gn_4_123041' => 'lsa', 'Lsat_1_v5_gn_4_133620' => 'lsa', 'Lsat_1_v5_gn_4_53221' => 'lsa', 'Lsat_1_v5_gn_4_71961' => 'lsa', 'Lsat_1_v5_gn_7_105241' => 'lsa', 'Lsat_1_v5_gn_7_21361' => 'lsa', 'Lsat_1_v5_gn_7_28860' => 'lsa', 'Lsat_1_v5_gn_7_31260' => 'lsa', 'Lsat_1_v5_gn_8_52801' => 'lsa', 'Manes.02G191400' => 'mes', 'Manes.03G110100' => 'mes', 'Manes.04G071100' => 'mes', 'Manes.05G100500' => 'mes', 'Manes.05G164700' => 'mes', 'Manes.15G087000' => 'mes', 'Manes.15G121500' => 'mes', 'Manes.16G028300' => 'mes', 'Manes.17G046100' => 'mes', 'Manes.17G069800' => 'mes', 'Manes.18G100500' => 'mes', 'Mapoly0002s0109' => 'mpo', 'Mapoly0024s0007' => 'mpo', 'Mapoly0089s0032' => 'mpo', 'MBI04_g42241_MAGBIO' => 'mbi', 'MBI05_g11988_MAGBIO' => 'mbi', 'MBI05_g35452_MAGBIO' => 'mbi', 'MBI07_g30179_MAGBIO' => 'mbi', 'MBI07_g35859_MAGBIO' => 'mbi', 'MBI07_g35860_MAGBIO' => 'mbi', 'MBI07_g37166_MAGBIO' => 'mbi', 'MBI08_g18172_MAGBIO' => 'mbi', 'MBI09_g08441_MAGBIO' => 'mbi', 'MBI13_g01676_MAGBIO' => 'mbi', 'MBI14_g42955_MAGBIO' => 'mbi', 'MBI16_g13161_MAGBIO' => 'mbi', 'MBI17_g27204_MAGBIO' => 'mbi', 'MBI19_g21595_MAGBIO' => 'mbi', 'MD00G1148400' => 'mdo', 'MD02G1301200' => 'mdo', 'MD03G1227800' => 'mdo', 'MD05G1041100' => 'mdo', 'MD05G1124800' => 'mdo', 'MD05G1284000' => 'mdo', 'MD05G1338800' => 'mdo', 'MD05G1338900' => 'mdo', 'MD07G1022800' => 'mdo', 'MD10G1047500' => 'mdo', 'MD10G1127500' => 'mdo', 'MD10G1262300' => 'mdo', 'MD10G1293800' => 'mdo', 'MD16G1074300' => 'mdo', 'Medtr1g021670' => 'mtr', 'Medtr1g096320' => 'mtr', 'Medtr2g013690' => 'mtr', 'Medtr2g019450' => 'mtr', 'Medtr2g085170' => 'mtr', 'Medtr4g088785' => 'mtr', 'Medtr8g055930' => 'mtr', 'Medtr8g085850' => 'mtr', 'MELO3C002605.2' => 'cme', 'MELO3C003891.2' => 'cme', 'MELO3C004012.2' => 'cme', 'MELO3C007134.2' => 'cme', 'MELO3C008118.2' => 'cme', 'MELO3C016700.2' => 'cme', 'MELO3C024127.2' => 'cme', 'MELO3C033361.2' => 'cme', 'MELO3C033362.2' => 'cme', 'Migut.C00430' => 'egut', 'Migut.C01246' => 'egut', 'Migut.E00101' => 'egut', 'Migut.H01486' => 'egut', 'Migut.H01939' => 'egut', 'Migut.K00360' => 'egut', 'Migut.M00910' => 'egut', 'Migut.M01139' => 'egut', 'Migut.N02677' => 'egut', 'MSTRG.13252' => 'ama', 'MSTRG.14701' => 'ama', 'MSTRG.1521' => 'ama', 'MSTRG.15884' => 'ama', 'MSTRG.16242' => 'ama', 'MSTRG.22285' => 'ama', 'MSTRG.22444' => 'ama', 'MSTRG.2349' => 'ama', 'MSTRG.26308' => 'ama', 'MSTRG.28296' => 'ama', 'MSTRG.9895' => 'ama', 'Nitab4.5_0000110g0060' => 'nta', 'Nitab4.5_0000420g0130' => 'nta', 'Nitab4.5_0000422g0030' => 'nta', 'Nitab4.5_0000560g0180' => 'nta', 'Nitab4.5_0000703g0100' => 'nta', 'Nitab4.5_0000786g0200' => 'nta', 'Nitab4.5_0001336g0020' => 'nta', 'Nitab4.5_0001796g0030' => 'nta', 'Nitab4.5_0003348g0060' => 'nta', 'Nitab4.5_0003698g0040' => 'nta', 'Nitab4.5_0003942g0090' => 'nta', 'Nitab4.5_0004775g0070' => 'nta', 'Nitab4.5_0004864g0030' => 'nta', 'Nitab4.5_0005615g0020' => 'nta', 'Nitab4.5_0009288g0030' => 'nta', 'Nitab4.5_0009341g0010' => 'nta', 'Nitab4.5_0009535g0010' => 'nta', 'Nn1g03995' => 'nnu', 'Nn1g04100' => 'nnu', 'Nn1g06530' => 'nnu', 'Nn3g16404' => 'nnu', 'Nn3g17212' => 'nnu', 'Nn3g20776' => 'nnu', 'Nn3g21923' => 'nnu', 'Nn5g27737' => 'nnu', 'Nn5g29461' => 'nnu', 'Nn7g38355' => 'nnu', 'Nn8g39873' => 'nnu', 'Oeu000548.2' => 'oeu', 'Oeu004672.1' => 'oeu', 'Oeu015605.2' => 'oeu', 'Oeu016092.1' => 'oeu', 'Oeu017879.3' => 'oeu', 'Oeu024910.1' => 'oeu', 'Oeu028965.1' => 'oeu', 'Oeu031269.1' => 'oeu', 'Oeu031270.1' => 'oeu', 'Oeu032535.1' => 'oeu', 'Oeu034151.1' => 'oeu', 'Oeu034152.1' => 'oeu', 'Oeu034588.2' => 'oeu', 'Oeu050846.1' => 'oeu', 'Oeu050849.2' => 'oeu', 'Oeu051063.2' => 'oeu', 'Oeu052368.1' => 'oeu', 'Oeu052370.1' => 'oeu', 'Os01g0210400' => 'osa', 'Os01g0304300' => 'osa', 'Os01g0749100' => 'osa', 'Os02g0745800' => 'osa', 'Os03g0769050' => 'osa', 'Os05g0531500' => 'osa', 'Os06g0724300' => 'osa', 'Os11g0198100' => 'osa', 'Peaxi162Scf00069g01425' => 'pax', 'Peaxi162Scf00280g00811' => 'pax', 'Peaxi162Scf00310g00615' => 'pax', 'Peaxi162Scf00362g00542' => 'pax', 'Peaxi162Scf00461g00310' => 'pax', 'Peaxi162Scf00530g00118' => 'pax', 'Peaxi162Scf00541g00057' => 'pax', 'Peaxi162Scf00661g00017' => 'pax', 'Peaxi162Scf00926g00027' => 'pax', 'Peaxi162Scf01064g00263' => 'pax', 'Peaxi162Scf01211g00135' => 'pax', 'PGR004G2336' => 'pgr', 'PGR042G0327' => 'pgr', 'PGR042G1957' => 'pgr', 'PGR042G2003' => 'pgr', 'PGR042G3929' => 'pgr', 'PGR083G1137' => 'pgr', 'PGR083G1364' => 'pgr', 'PGSC0003DMG400003381' => 'stu', 'PGSC0003DMG400003417' => 'stu', 'PGSC0003DMG400008981' => 'stu', 'PGSC0003DMG400012417' => 'stu', 'PGSC0003DMG400012823' => 'stu', 'PGSC0003DMG400016885' => 'stu', 'PGSC0003DMG400022812' => 'stu', 'PGSC0003DMG400029726' => 'stu', 'PGSC0003DMG401009243' => 'stu', 'PGSC0003DMG401031505' => 'stu', 'PGSC0003DMG402031505' => 'stu', 'Phvul.001G017600' => 'pvu', 'Phvul.002G193500' => 'pvu', 'Phvul.002G228900' => 'pvu', 'Phvul.002G236800' => 'pvu', 'Phvul.003G049500' => 'pvu', 'Phvul.005G072000' => 'pvu', 'Phvul.006G164800' => 'pvu', 'Phvul.006G185100' => 'pvu', 'Phvul.007G090000' => 'pvu', 'Potri.001G399800' => 'ptr', 'Potri.002G149900' => 'ptr', 'Potri.004G044100' => 'ptr', 'Potri.004G177600' => 'ptr', 'Potri.009G138000' => 'ptr', 'Potri.010G094000' => 'ptr', 'Potri.011G053000' => 'ptr', 'Potri.011G119300' => 'ptr', 'Potri.013G113700' => 'ptr', 'Potri.018G107800' => 'ptr', 'Potri.019G084100' => 'ptr', 'Pp3c14_23720' => 'ppa', 'Pp3c16_6340' => 'ppa', 'Pp3c23_13420' => 'ppa', 'Pp3c24_2740' => 'ppa', 'Pp3c25_860' => 'ppa', 'Pp3c8_21750' => 'ppa', 'Prupe.1G273000' => 'ppe', 'Prupe.1G273700' => 'ppe', 'Prupe.1G274100' => 'ppe', 'Prupe.2G023300' => 'ppe', 'Prupe.4G048000' => 'ppe', 'Prupe.4G080400' => 'ppe', 'Prupe.4G181200' => 'ppe', 'Prupe.8G056900' => 'ppe', 'Prupe.8G168700' => 'ppe', 'Psat1g189080' => 'psa', 'Psat1g204760' => 'psa', 'Psat4g175560' => 'psa', 'Psat4g177720' => 'psa', 'Psat5g244240' => 'psa', 'Psat6g010720' => 'psa', 'Psat6g187200' => 'psa', 'Psat7g072040' => 'psa', 'PSO017G3501' => 'pso', 'PSO063G2148' => 'pso', 'PSO063G5608' => 'pso', 'PSO210G6392' => 'pso', 'PSO541G2319' => 'pso', 'PSO541G2836' => 'pso', 'PSO541G4012' => 'pso', 'PSO541G6253' => 'pso', 'PSO675G0580' => 'pso', 'PSO675G0856' => 'pso', 'PSO675G5635' => 'pso', 'PSO675G9157' => 'pso', 'PSO832G1660' => 'pso', 'PSO832G1969' => 'pso', 'QL02p007186' => 'qlo', 'QL02p033904' => 'qlo', 'QL03p064391' => 'qlo', 'QL05p040593' => 'qlo', 'QL05p058242' => 'qlo', 'QL08p021825' => 'qlo', 'QL11p004981' => 'qlo', 'RcHm_v2.0_Chr1g0318301' => 'rch', 'RcHm_v2.0_Chr4g0418501' => 'rch', 'RcHm_v2.0_Chr4g0439971' => 'rch', 'RcHm_v2.0_Chr5g0008541' => 'rch', 'RcHm_v2.0_Chr5g0014101' => 'rch', 'RcHm_v2.0_Chr5g0014131' => 'rch', 'RcHm_v2.0_Chr5g0033621' => 'rch', 'RcHm_v2.0_Chr6g0272041' => 'rch', 'RcHm_v2.0_Chr6g0278831' => 'rch', 'Rhsim02G0130400' => 'rsi', 'Rhsim02G0171100' => 'rsi', 'Rhsim05G0053000' => 'rsi', 'Rhsim05G0053100' => 'rsi', 'Rhsim06G0096500' => 'rsi', 'Rhsim06G0096600' => 'rsi', 'Rhsim06G0199100' => 'rsi', 'Rhsim12G0062300' => 'rsi', 'Rhsim12G0062800' => 'rsi', 'Sabra02G0118600' => 'sbr', 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'Solyc03g079860.2' => 'sly', 'Solyc04g079770.3' => 'sly', 'Solyc05g007430.4' => 'sly', 'Solyc07g063150.3' => 'sly', 'Solyc08g016620.3' => 'sly', 'Solyc09g057590.3' => 'sly', 'Solyc09g057600.1' => 'sly', 'Solyc10g009050.3' => 'sly', 'Solyc11g017420.2' => 'sly', 'Sopen01g053810' => 'spe', 'Sopen02g023040' => 'spe', 'Sopen03g002440' => 'spe', 'Sopen04g033350' => 'spe', 'Sopen05g003310' => 'spe', 'Sopen07g004050' => 'spe', 'Sopen07g031340' => 'spe', 'Sopen08g006990' => 'spe', 'Sopen10g004830' => 'spe', 'Sopen11g009370' => 'spe', 'Sp1g24450' => 'spa', 'Sp1g29670' => 'spa', 'Sp1g39600' => 'spa', 'Sp2g11080' => 'spa', 'Sp2g13970' => 'spa', 'Sp4g16130' => 'spa', 'Sp6g13080' => 'spa', 'Sp7g37270' => 'spa', 'TAR371G0065' => 'tar', 'TAR376G0340' => 'tar', 'TAR376G0435' => 'tar', 'TAR381G0002' => 'tar', 'TAR381G1236' => 'tar', 'TAR624G0055' => 'tar', 'TAR624G0324' => 'tar', 'TAR624G0696' => 'tar', 'TAR624G0906' => 'tar', 'TAR625G0107' => 'tar', 'TAR626G0015' => 'tar', 'TAR626G1356' => 'tar', 'TAR627G0888' => 'tar', 'TAR628G0399' => 'tar', 'TAR628G1327' => 'tar', 'TAR629G2831' => 'tar', 'TAR629G2874' => 'tar', 'TAR633G1432' => 'tar', 'TAR633G2771' => 'tar', 'THA.LOC104803394' => 'tha', 'THA.LOC104805153' => 'tha', 'THA.LOC104806784' => 'tha', 'THA.LOC104810473' => 'tha', 'THA.LOC104813100' => 'tha', 'THA.LOC104814215' => 'tha', 'THA.LOC104815554' => 'tha', 'THA.LOC104820544' => 'tha', 'THA.LOC104824754' => 'tha', 'THA.LOC104827717' => 'tha', 'Thecc.02G031400' => 'tca', 'Thecc.02G055900' => 'tca', 'Thecc.02G350800' => 'tca', 'Thecc.06G150900' => 'tca', 'Thecc.06G186600' => 'tca', 'Thecc.07G089600' => 'tca', 'Thecc.08G020400' => 'tca', 'Thecc.08G182100' => 'tca', 'Thhalv10000873m.g' => 'esa', 'Thhalv10004185m.g' => 'esa', 'Thhalv10006981m.g' => 'esa', 'Thhalv10007204m.g' => 'esa', 'Thhalv10011374m.g' => 'esa', 'Thhalv10013482m.g' => 'esa', 'Thhalv10017801m.g' => 'esa', 'Thhalv10024983m.g' => 'esa', 'TPR.G12072' => 'tpr', 'TPR.G15769' => 'tpr', 'TPR.G16504' => 'tpr', 'TPR.G16506' => 'tpr', 'TPR.G24345' => 'tpr', 'TPR.G26666' => 'tpr', 'TPR.G27320' => 'tpr', 'TPR.G31819' => 'tpr', 'TPR.G38879' => 'tpr', 'TPR.G39015' => 'tpr', 'TPR.G8819' => 'tpr', 'TWI09G0924' => 'twi', 'TWI12G0811' => 'twi', 'TWI12G1294' => 'twi', 'TWI31G0150' => 'twi', 'TWI36G1262' => 'twi', 'TWI38G1287' => 'twi', 'TWI38G1633' => 'twi', 'TWI38G1982' => 'twi', 'TWI39G0116' => 'twi', 'TWI60G1011' => 'twi', 'TWI63G0171' => 'twi', 'TWI73G0839' => 'twi', 'TWI79G1511' => 'twi', 'unitig_0.g915' => 'ugi', 'unitig_0.g916' => 'ugi', 'unitig_21.g20219' => 'ugi', 'unitig_21.g20416' => 'ugi', 'unitig_578.g16132' => 'ugi', 'unitig_578.g16718' => 'ugi', 'unitig_62.g23481' => 'ugi', 'unitig_744.g24535' => 'ugi', 'unitig_749.g13525' => 'ugi', 'vmacro01248' => 'vma', 'vmacro02290' => 'vma', 'vmacro10946' => 'vma', 'vmacro11865' => 'vma', 'vmacro12493' => 'vma', 'vmacro17322' => 'vma', 'vmacro21599' => 'vma', 'vmacro23041' => 'vma', 'VMungo0251G0004' => 'vmu', 'VMungo0251G2639' => 'vmu', 'VMungo0251G2967' => 'vmu', 'VMungo0540G0864' => 'vmu', 'VMungo0540G1569' => 'vmu', 'VMungo0647G0317' => 'vmu', 'VMungo0720G1373' => 'vmu', 'VMungo0720G1508' => 'vmu', 'VMungo1080G0485' => 'vmu', 'VMungo1215G3177' => 'vmu', 'Zm00001eb112600' => 'zma', 'Zm00001eb120220' => 'zma', 'Zm00001eb153240' => 'zma', 'Zm00001eb168880' => 'zma', 'Zm00001eb213920' => 'zma', 'Zm00001eb228280' => 'zma', 'Zm00001eb254580' => 'zma', 'Zm00001eb272180' => 'zma', 'Zm00001eb293190' => 'zma', 'Zm00001eb322930' => 'zma', 'Zm00001eb353360' => 'zma', 'Zm00001eb353390' => 'zma', 'Zm00001eb353430' => 'zma', 'Zm00001eb353440' => 'zma', 'Zm00001eb353780' => 'zma' ), 'gf_id' => 'HOM05D000499', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000499' ), 'data_identifier' => 'HOM05D000499', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000499', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1066', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p29780' => 'bna', 'A02p33180' => 'bna', 'A03p16470' => 'bna', 'A03p66010' => 'bna', 'A04p25970' => 'bna', 'A06p01270' => 'bna', 'A06p46080' => 'bna', 'A07p11400' => 'bna', 'A08p01840' => 'bna', 'A08p08230' => 'bna', 'A08p25740' => 'bna', 'A09p32070' => 'bna', 'A09p37830' => 'bna', 'A09p42840' => 'bna', 'A09p42850' => 'bna', 'Aa31LG10G2060' => 'aar', 'Aa31LG2G7410' => 'aar', 'Aa31LG6G10200' => 'aar', 'Aa31LG6G16680' => 'aar', 'Aa31LG6G8470' => 'aar', 'Aa31LG9G12730' => 'aar', 'Aa31LG9G13680' => 'aar', 'Aa31LG9G14920' => 'aar', 'Aa31LG9G6650' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4977' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5467' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3254' => 'aag', 'Actinidia02578' => 'ach', 'Actinidia07693' => 'ach', 'Actinidia08413' => 'ach', 'Actinidia08414' => 'ach', 'Actinidia15289' => 'ach', 'Actinidia19871' => 'ach', 'Actinidia21475' => 'ach', 'Actinidia22576' => 'ach', 'Actinidia28327' => 'ach', 'Actinidia32491' => 'ach', 'Actinidia39463' => 'ach', 'Actinidia39571' => 'ach', 'Ah.01g013750' => 'amhyb', 'Ah.01g023210' => 'amhyb', 'Ah.04g164850' => 'amhyb', 'Ah.05g178060' => 'amhyb', 'Ah.07g204270' => 'amhyb', 'Ah.07g208480' => 'amhyb', 'Ah.09g237410' => 'amhyb', 'Ah.14g089460' => 'amhyb', 'AL1G41790' => 'aly', 'AL1G49050' => 'aly', 'AL1G53810' => 'aly', 'AL1G61400' => 'aly', 'AL4G18580' => 'aly', 'AL5G12510' => 'aly', 'AL5G12540' => 'aly', 'AL6G43230' => 'aly', 'AL7G10370' => 'aly', 'AL7G19250' => 'aly', 'AL8G12240' => 'aly', 'AL8G18540' => 'aly', 'Aqoxy1G02409' => 'aox', 'Aqoxy2G03993' => 'aox', 'Aqoxy3G03357' => 'aox', 'Aqoxy4G00785' => 'aox', 'Aqoxy5G02598' => 'aox', 'Aqoxy6G00132' => 'aox', 'Aqoxy7G01776' => 'aox', 'Aqoxy7G02316' => 'aox', 'Aqoxy7G03973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.12AFKW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B8730' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27IQR1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3F75VG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3RE0GA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41TCQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.527VTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FIR39' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5W8UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DA38EV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ63HS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H1I32C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HC27T5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4M8AP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7N3CZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9UVDZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LS1NQA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT1D4B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SKC4TM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCFV76' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF9Q1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQWD9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1ZM88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WE07RT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YCK7VH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJE6Q6' => 'arhy', 'AT1G28240' => 'ath', 'AT1G34550' => 'ath', 'AT1G53040' => 'ath', 'AT2G02910' => 'ath', 'AT4G09630' => 'ath', 'AT4G38500' => 'ath', 'AT5G42660' => 'ath', 'AT5G46220' => 'ath', 'ATR0152G026' => 'atr', 'ATR0564G343' => 'atr', 'ATR0706G151' => 'atr', 'ATR0733G207' => 'atr', 'ATR0751G234' => 'atr', 'ATR0807G048' => 'atr', 'ATR1091G084' => 'atr', 'Atru.chr10.1229' => 'acertr', 'Atru.chr10.1230' => 'acertr', 'Atru.chr10.1874' => 'acertr', 'Atru.chr11.1808' => 'acertr', 'Atru.chr13.1795' => 'acertr', 'Atru.chr13.570' => 'acertr', 'Atru.chr2.2608' => 'acertr', 'Atru.chr2.2609' => 'acertr', 'Atru.chr5.3428' => 'acertr', 'Atru.chr8.1171' => 'acertr', 'AUR62004651' => 'cqu', 'AUR62008675' => 'cqu', 'AUR62010014' => 'cqu', 'AUR62013004' => 'cqu', 'AUR62014825' => 'cqu', 'AUR62015015' => 'cqu', 'AUR62015151' => 'cqu', 'AUR62017020' => 'cqu', 'AUR62019422' => 'cqu', 'AUR62023570' => 'cqu', 'AUR62025571' => 'cqu', 'AUR62029098' => 'cqu', 'AUR62033863' => 'cqu', 'AUR62034296' => 'cqu', 'AUR62040075' => 'cqu', 'BcaB02g07334' => 'bca', 'BcaB02g10575' => 'bca', 'BcaB03g12119' => 'bca', 'BcaB03g12120' => 'bca', 'BcaB03g13945' => 'bca', 'BcaB04g17123' => 'bca', 'BcaB04g17867' => 'bca', 'BcaB04g19839' => 'bca', 'BcaB07g30317' => 'bca', 'BcaB07g32432' => 'bca', 'BcaB07g33362' => 'bca', 'BcaB08g36611' => 'bca', 'BcaC01g00028' => 'bca', 'BcaC01g01356' => 'bca', 'BcaC01g02034' => 'bca', 'BcaC01g06051' => 'bca', 'BcaC03g16839' => 'bca', 'BcaC03g17176' => 'bca', 'BcaC05g26829' => 'bca', 'BcaC06g31490' => 'bca', 'BcaC06g35344' => 'bca', 'BcaC06g36570' => 'bca', 'BcaC07g37537' => 'bca', 'BcaC08g43491' => 'bca', 'BcaC08g43773' => 'bca', 'BcaNung00234' => 'bca', 'BcaNung01982' => 'bca', 'BcaNung03707' => 'bca', 'BcaNung06454' => 'bca', 'BolC2t10762H' => 'bol', 'BolC2t11191H' => 'bol', 'BolC3t14322H' => 'bol', 'BolC3t19747H' => 'bol', 'BolC3t21425H' => 'bol', 'BolC4t27800H' => 'bol', 'BolC5t31423H' => 'bol', 'BolC6t35951H' => 'bol', 'BolC6t36282H' => 'bol', 'BolC7t40678H' => 'bol', 'BolC7t40679H' => 'bol', 'BolC7t42222H' => 'bol', 'BolC7t43492H' => 'bol', 'BolC7t46785H' => 'bol', 'BolC8t47853H' => 'bol', 'BolC9t56805H' => 'bol', 'BraA02t08000Z' => 'bra', 'BraA02t08341Z' => 'bra', 'BraA03t10936Z' => 'bra', 'BraA03t15657Z' => 'bra', 'BraA04t18100Z' => 'bra', 'BraA05t20523Z' => 'bra', 'BraA06t23353Z' => 'bra', 'BraA06t27473Z' => 'bra', 'BraA06t27769Z' => 'bra', 'BraA07t28928Z' => 'bra', 'BraA08t32236Z' => 'bra', 'BraA08t32841Z' => 'bra', 'BraA08t34524Z' => 'bra', 'BraA09t38742Z' => 'bra', 'BraA09t39295Z' => 'bra', 'C02p47180' => 'bna', 'C02p50990' => 'bna', 'C03p19360' => 'bna', 'C03p74950' => 'bna', 'C03p91000' => 'bna', 'C04p63260' => 'bna', 'C05p27050' => 'bna', 'C06p08750' => 'bna', 'C06p11490' => 'bna', 'C07p02820' => 'bna', 'C07p17180' => 'bna', 'C07p29440' => 'bna', 'C07p63730' => 'bna', 'C09p39260' => 'bna', 'CAN.G1164.34' => 'can', 'CAN.G1164.39' => 'can', 'CAN.G1530.3' => 'can', 'CAN.G162.61' => 'can', 'CAN.G176.6' => 'can', 'CAN.G289.49' => 'can', 'CAN.G370.21' => 'can', 'CAN.G370.22' => 'can', 'CAN.G371.117' => 'can', 'CAN.G58.37' => 'can', 'CAN.G588.98' => 'can', 'CANSAT21G2266' => 'cansat', 'CANSAT25G2799' => 'cansat', 'CANSAT35G0862' => 'cansat', 'CANSAT35G1704' => 'cansat', 'CANSAT35G1760' => 'cansat', 'CANSAT56G3971' => 'cansat', 'CANSAT56G4116' => 'cansat', 'CANSAT80G1259' => 'cansat', 'CARHR027730' => 'chi', 'CARHR033880' => 'chi', 'CARHR043270' => 'chi', 'CARHR145330' => 'chi', 'CARHR145340' => 'chi', 'CARHR175570' => 'chi', 'CARHR181570' => 'chi', 'CARHR258470' => 'chi', 'CARHR260490' => 'chi', 'CARHR294220' => 'chi', 'Carub.0001s2668' => 'cru', 'Carub.0001s3257' => 'cru', 'Carub.0001s4220' => 'cru', 'Carub.0005s0179' => 'cru', 'Carub.0006s2807' => 'cru', 'Carub.0007s0039' => 'cru', 'Carub.0008s0169' => 'cru', 'Carub.0008s0636' => 'cru', 'Ca_00338_v3' => 'car', 'Ca_00542_v3' => 'car', 'Ca_01844_v3' => 'car', 'Ca_10611_v3' => 'car', 'Ca_13326_v3' => 'car', 'Ca_17944_v3' => 'car', 'Ca_18546_v3' => 'car', 'Ca_24219_v3' => 'car', 'Ca_29972_v3' => 'car', 'CBR_g3681' => 'cbr', 'CBR_g40021' => 'cbr', 'Cc01_g08140' => 'ccan', 'Cc02_g13410' => 'ccan', 'Cc02_g37480' => 'ccan', 'Cc05_g12030' => 'ccan', 'Cc09_g03370' => 'ccan', 'Cc09_g10300' => 'ccan', 'Cc10_g03530' => 'ccan', 'Cc10_g11380' => 'ccan', 'CDE01G0176' => 'cde', 'CDE02G0675' => 'cde', 'CDE02G0942' => 'cde', 'CDE02G1153' => 'cde', 'CDE02G4177' => 'cde', 'CDE04G2117' => 'cde', 'CDE04G2736' => 'cde', 'CDE08G1161' => 'cde', 'CDE09G1238' => 'cde', 'Cfa000467' => 'cfa', 'Cfa000947' => 'cfa', 'Cfa004969' => 'cfa', 'Cfa005284' => 'cfa', 'Cfa008993' => 'cfa', 'Cfa018187' => 'cfa', 'Cfa018454' => 'cfa', 'Cfa020585' => 'cfa', 'Ciclev10000424m.g' => 'ccl', 'Ciclev10003605m.g' => 'ccl', 'Ciclev10007828m.g' => 'ccl', 'Ciclev10014620m.g' => 'ccl', 'Ciclev10015169m.g' => 'ccl', 'Ciclev10018291m.g' => 'ccl', 'Ciclev10028256m.g' => 'ccl', 'Ciclev10033822m.g' => 'ccl', 'CiPaw.05G060300' => 'cil', 'CiPaw.05G085000' => 'cil', 'CiPaw.06G083700' => 'cil', 'CiPaw.06G120300' => 'cil', 'CiPaw.09G060500' => 'cil', 'CiPaw.09G123800' => 'cil', 'CiPaw.11G169700' => 'cil', 'CiPaw.12G118300' => 'cil', 'CiPaw.15G071000' => 'cil', 'CiPaw.15G081900' => 'cil', 'ClCG01G024610' => 'cla', 'ClCG03G006070' => 'cla', 'ClCG05G019250' => 'cla', 'ClCG09G009500' => 'cla', 'ClCG11G008200' => 'cla', 'ClCG11G018080' => 'cla', 'COL.COLO4_17373' => 'col', 'COL.COLO4_22994' => 'col', 'COL.COLO4_26389' => 'col', 'COL.COLO4_27170' => 'col', 'COL.COLO4_31074' => 'col', 'COL.COLO4_31465' => 'col', 'COL.COLO4_36438' => 'col', 'COL.COLO4_36439' => 'col', 'Cpa.g.c38781' => 'cpa', 'Cpa.g.sc128.12' => 'cpa', 'Cpa.g.sc166.7' => 'cpa', 'Cpa.g.sc166.8' => 'cpa', 'Cpa.g.sc20.111' => 'cpa', 'Cpa.g.sc27.31' => 'cpa', 'Cpa.g.sc64.36' => 'cpa', 'Cpa.g.sc64.37' => 'cpa', 'Cpa.g.sc66.49' => 'cpa', 'Cpa.g.sc80.64' => 'cpa', 'CsaV3_1G012320' => 'csa', 'CsaV3_2G008480' => 'csa', 'CsaV3_2G033450' => 'csa', 'CsaV3_3G044830' => 'csa', 'CsaV3_4G033710' => 'csa', 'CsaV3_6G051730' => 'csa', 'CsaV3_7G025350' => 'csa', 'CSS0001067' => 'camsi', 'CSS0005996' => 'camsi', 'CSS0006590' => 'camsi', 'CSS0009673' => 'camsi', 'CSS0010201' => 'camsi', 'CSS0010549' => 'camsi', 'CSS0011364' => 'camsi', 'CSS0014473' => 'camsi', 'CSS0014961' => 'camsi', 'CSS0020191' => 'camsi', 'CSS0021165' => 'camsi', 'CSS0022306' => 'camsi', 'CSS0030591' => 'camsi', 'CSS0030696' => 'camsi', 'CSS0032653' => 'camsi', 'CSS0037487' => 'camsi', 'CSS0041102' => 'camsi', 'CSS0041261' => 'camsi', 'CSS0046246' => 'camsi', 'CSS0049256' => 'camsi', 'DCAR_004075' => 'dca', 'DCAR_011538' => 'dca', 'DCAR_019553' => 'dca', 'DCAR_020952' => 'dca', 'DCAR_021739' => 'dca', 'DCAR_027407' => 'dca', 'DCAR_027913' => 'dca', 'DCAR_028066' => 'dca', 'Dinv05899' => 'din', 'Dinv07563' => 'din', 'Dinv08010' => 'din', 'Dinv14125' => 'din', 'Dinv20172' => 'din', 'Dinv30743' => 'din', 'Dinv31229' => 'din', 'Dinv34162' => 'din', 'Dinv36028' => 'din', 'Dinv39368' => 'din', 'Dinv40565' => 'din', 'Dinv41706' => 'din', 'Duzib052G0089' => 'dzi', 'Duzib116G0641' => 'dzi', 'Duzib132G0069' => 'dzi', 'Duzib132G1219' => 'dzi', 'Duzib147G0278' => 'dzi', 'Duzib160G0480' => 'dzi', 'Duzib170G0661' => 'dzi', 'Duzib177G0591' => 'dzi', 'Duzib187G1353' => 'dzi', 'Duzib192G0858' => 'dzi', 'Duzib192G0883' => 'dzi', 'Duzib213G0506' => 'dzi', 'Duzib235G0289' => 'dzi', 'Duzib251G0422' => 'dzi', 'ECA232G3898' => 'eca', 'ECA233G5950' => 'eca', 'ECA234G1699' => 'eca', 'ECA234G2421' => 'eca', 'ECA236G0426' => 'eca', 'ECA236G4331' => 'eca', 'ECA248G2573' => 'eca', 'EL10Ac1g00077' => 'bvu', 'EL10Ac1g01746' => 'bvu', 'EL10Ac2g03464' => 'bvu', 'EL10Ac4g08176' => 'bvu', 'EL10Ac7g17521' => 'bvu', 'EL10Ac8g20386' => 'bvu', 'EL10Ac9g21343' => 'bvu', 'EL10Ac9g22688' => 'bvu', 'Eucgr.B03434' => 'egr', 'Eucgr.D00618' => 'egr', 'Eucgr.E02395' => 'egr', 'Eucgr.F01129' => 'egr', 'Eucgr.F02622' => 'egr', 'Eucgr.F04207' => 'egr', 'FAN01G0570' => 'fan', 'FAN03G3351' => 'fan', 'FAN06G3702' => 'fan', 'FAN07G2149' => 'fan', 'FAN10G3758' => 'fan', 'FAN11G1170' => 'fan', 'FAN11G2050' => 'fan', 'FAN11G2724' => 'fan', 'FAN12G1700' => 'fan', 'FAN12G2028' => 'fan', 'FAN15G1160' => 'fan', 'FAN15G3063' => 'fan', 'FAN16G2540' => 'fan', 'FAN16G3077' => 'fan', 'FAN16G3624' => 'fan', 'FAN17G0221' => 'fan', 'FAN20G2492' => 'fan', 'FAN20G2905' => 'fan', 'FAN21G0548' => 'fan', 'FAN21G1300' => 'fan', 'FAN22G0077' => 'fan', 'FAN22G1315' => 'fan', 'FAN24G1280' => 'fan', 'FAN24G1445' => 'fan', 'FAN24G3527' => 'fan', 'FAN25G0464' => 'fan', 'FAN25G2885' => 'fan', 'FAN25G3270' => 'fan', 'FAN27G1101' => 'fan', 'FAN27G2846' => 'fan', 'FAN27G3524' => 'fan', 'FvH4_2g11770' => 'fve', 'FvH4_2g15630' => 'fve', 'FvH4_3g05570' => 'fve', 'FvH4_3g09110' => 'fve', 'FvH4_3g19940' => 'fve', 'FvH4_4g04821' => 'fve', 'FvH4_4g31480' => 'fve', 'FvH4_7g01740' => 'fve', 'Glyma.05G130400' => 'gma', 'Glyma.05G156400' => 'gma', 'Glyma.07G197000' => 'gma', 'Glyma.08G085151' => 'gma', 'Glyma.08G114500' => 'gma', 'Glyma.08G300400' => 'gma', 'Glyma.10G215800' => 'gma', 'Glyma.12G224400' => 'gma', 'Glyma.13G179300' => 'gma', 'Glyma.13G218151' => 'gma', 'Glyma.13G238800' => 'gma', 'Glyma.13G276900' => 'gma', 'Glyma.14G078200' => 'gma', 'Glyma.15G074500' => 'gma', 'Glyma.15G094100' => 'gma', 'Glyma.17G247200' => 'gma', 'Glyma.18G120100' => 'gma', 'Glyma.20G176000' => 'gma', 'Gohir.A01G063600' => 'ghi', 'Gohir.A01G170301' => 'ghi', 'Gohir.A02G060500' => 'ghi', 'Gohir.A05G133850' => 'ghi', 'Gohir.A05G161400' => 'ghi', 'Gohir.A06G012900' => 'ghi', 'Gohir.A06G035901' => 'ghi', 'Gohir.A06G127100' => 'ghi', 'Gohir.A06G210500' => 'ghi', 'Gohir.A08G008650' => 'ghi', 'Gohir.A09G072700' => 'ghi', 'Gohir.A09G088301' => 'ghi', 'Gohir.A10G040600' => 'ghi', 'Gohir.A12G036300' => 'ghi', 'Gohir.A12G143350' => 'ghi', 'Gohir.A12G165500' => 'ghi', 'Gohir.A13G145700' => 'ghi', 'Gohir.D01G050000' => 'ghi', 'Gohir.D01G051366' => 'ghi', 'Gohir.D01G161350' => 'ghi', 'Gohir.D02G065900' => 'ghi', 'Gohir.D05G164200' => 'ghi', 'Gohir.D05G355500' => 'ghi', 'Gohir.D06G010400' => 'ghi', 'Gohir.D06G111250' => 'ghi', 'Gohir.D06G132000' => 'ghi', 'Gohir.D06G210500' => 'ghi', 'Gohir.D07G165675' => 'ghi', 'Gohir.D08G062240' => 'ghi', 'Gohir.D08G086101' => 'ghi', 'Gohir.D08G138060' => 'ghi', 'Gohir.D09G072300' => 'ghi', 'Gohir.D10G041400' => 'ghi', 'Gohir.D11G191020' => 'ghi', 'Gohir.D11G212066' => 'ghi', 'Gohir.D12G036300' => 'ghi', 'Gohir.D12G168600' => 'ghi', 'Gohir.D13G150600' => 'ghi', 'Gorai.001G057300' => 'gra', 'Gorai.002G069900' => 'gra', 'Gorai.002G200000' => 'gra', 'Gorai.003G067600' => 'gra', 'Gorai.005G074800' => 'gra', 'Gorai.006G087300' => 'gra', 'Gorai.008G037500' => 'gra', 'Gorai.008G181400' => 'gra', 'Gorai.009G169400' => 'gra', 'Gorai.009G387900' => 'gra', 'Gorai.010G013300' => 'gra', 'Gorai.010G153800' => 'gra', 'Gorai.010G255800' => 'gra', 'Gorai.011G043700' => 'gra', 'Gorai.011G198900' => 'gra', 'Gorai.013G168400' => 'gra', 'GSVIVG01005212001' => 'vvi', 'GSVIVG01006163001' => 'vvi', 'GSVIVG01009625001' => 'vvi', 'GSVIVG01014338001' => 'vvi', 'GSVIVG01020005001' => 'vvi', 'GSVIVG01021450001' => 'vvi', 'GSVIVG01023975001' => 'vvi', 'GSVIVG01034490001' => 'vvi', 'HanXRQChr04g0112071' => 'han', 'HanXRQChr05g0131151' => 'han', 'HanXRQChr09g0262371' => 'han', 'HanXRQChr09g0268401' => 'han', 'HanXRQChr10g0279241' => 'han', 'HanXRQChr10g0297961' => 'han', 'HanXRQChr11g0326231' => 'han', 'HanXRQChr11g0328471' => 'han', 'HanXRQChr16g0507941' => 'han', 'HanXRQChr17g0560211' => 'han', 'Haze_02108' => 'cav', 'Haze_02428' => 'cav', 'Haze_05593' => 'cav', 'Haze_06448' => 'cav', 'Haze_09427' => 'cav', 'Haze_12022' => 'cav', 'Haze_17612' => 'cav', 'Haze_17928' => 'cav', 'Hma1.2p1_0032F.1_g019250' => 'hma', 'Hma1.2p1_0163F.1_g072690' => 'hma', 'Hma1.2p1_0265F.1_g106710' => 'hma', 'Hma1.2p1_0286F.1_g113970' => 'hma', 'Hma1.2p1_0363F.1_g136640' => 'hma', 'Hma1.2p1_0584F.1_g183470' => 'hma', 'Hma1.2p1_0885F.1_g232570' => 'hma', 'HPP92_006022' => 'vpl', 'HPP92_007320' => 'vpl', 'HPP92_011521' => 'vpl', 'HPP92_019387' => 'vpl', 'HPP92_024038' => 'vpl', 'Hund05891' => 'sun', 'Hund06450' => 'sun', 'Hund12053' => 'sun', 'Hund16800' => 'sun', 'Hund21222' => 'sun', 'Hund22896' => 'sun', 'Hund23746' => 'sun', 'Hund27083' => 'sun', 'Lalb_Chr02g0141831' => 'lal', 'Lalb_Chr02g0141841' => 'lal', 'Lalb_Chr05g0220411' => 'lal', 'Lalb_Chr06g0162081' => 'lal', 'Lalb_Chr09g0327651' => 'lal', 'Lalb_Chr13g0295051' => 'lal', 'Lalb_Chr15g0086801' => 'lal', 'Lalb_Chr16g0383781' => 'lal', 'Lalb_Chr16g0383791' => 'lal', 'Lalb_Chr18g0055441' => 'lal', 'Lalb_Chr18g0059611' => 'lal', 'Lalb_Chr20g0109661' => 'lal', 'Lalb_Chr20g0109831' => 'lal', 'Lalb_Chr20g0121871' => 'lal', 'Lalb_Chr22g0355361' => 'lal', 'Lalb_Chr25g0286371' => 'lal', 'Lj1A1187G43' => 'lonja', 'Lj1A1205T50' => 'lonja', 'Lj1A800G33' => 'lonja', 'Lj1C1187T7' => 'lonja', 'Lj1C843T11' => 'lonja', 'Lj1g0010940' => 'lja', 'Lj2A288T69' => 'lonja', 'Lj3g0024276' => 'lja', 'Lj4A47T76' => 'lonja', 'Lj4g0005805' => 'lja', 'Lj4g0006097' => 'lja', 'Lj4g0008528' => 'lja', 'Lj4g0024907' => 'lja', 'Lj5g0012472' => 'lja', 'Lj5g0018648' => 'lja', 'Lj6C789G1' => 'lonja', 'Lj6g0004000' => 'lja', 'Lj7A292G67' => 'lonja', 'Lj7A292T64' => 'lonja', 'Lj9A400T58' => 'lonja', 'Lsat_1_v5_gn_1_126181' => 'lsa', 'Lsat_1_v5_gn_4_123041' => 'lsa', 'Lsat_1_v5_gn_4_133620' => 'lsa', 'Lsat_1_v5_gn_4_53221' => 'lsa', 'Lsat_1_v5_gn_4_71961' => 'lsa', 'Lsat_1_v5_gn_7_105241' => 'lsa', 'Lsat_1_v5_gn_7_21361' => 'lsa', 'Lsat_1_v5_gn_7_28860' => 'lsa', 'Lsat_1_v5_gn_7_31260' => 'lsa', 'Lsat_1_v5_gn_8_52801' => 'lsa', 'Manes.02G191400' => 'mes', 'Manes.03G110100' => 'mes', 'Manes.04G071100' => 'mes', 'Manes.05G100500' => 'mes', 'Manes.05G164700' => 'mes', 'Manes.15G087000' => 'mes', 'Manes.15G121500' => 'mes', 'Manes.16G028300' => 'mes', 'Manes.17G046100' => 'mes', 'Manes.17G069800' => 'mes', 'Manes.18G100500' => 'mes', 'Mapoly0002s0109' => 'mpo', 'Mapoly0024s0007' => 'mpo', 'Mapoly0089s0032' => 'mpo', 'MBI04_g42241_MAGBIO' => 'mbi', 'MBI05_g11988_MAGBIO' => 'mbi', 'MBI05_g35452_MAGBIO' => 'mbi', 'MBI07_g30179_MAGBIO' => 'mbi', 'MBI07_g35859_MAGBIO' => 'mbi', 'MBI07_g35860_MAGBIO' => 'mbi', 'MBI07_g37166_MAGBIO' => 'mbi', 'MBI08_g18172_MAGBIO' => 'mbi', 'MBI09_g08441_MAGBIO' => 'mbi', 'MBI13_g01676_MAGBIO' => 'mbi', 'MBI14_g42955_MAGBIO' => 'mbi', 'MBI16_g13161_MAGBIO' => 'mbi', 'MBI17_g27204_MAGBIO' => 'mbi', 'MBI19_g21595_MAGBIO' => 'mbi', 'MD00G1148400' => 'mdo', 'MD02G1301200' => 'mdo', 'MD03G1227800' => 'mdo', 'MD05G1041100' => 'mdo', 'MD05G1124800' => 'mdo', 'MD05G1284000' => 'mdo', 'MD05G1338800' => 'mdo', 'MD05G1338900' => 'mdo', 'MD07G1022800' => 'mdo', 'MD10G1047500' => 'mdo', 'MD10G1127500' => 'mdo', 'MD10G1262300' => 'mdo', 'MD10G1293800' => 'mdo', 'MD16G1074300' => 'mdo', 'Medtr1g021670' => 'mtr', 'Medtr1g096320' => 'mtr', 'Medtr2g013690' => 'mtr', 'Medtr2g019450' => 'mtr', 'Medtr2g085170' => 'mtr', 'Medtr4g088785' => 'mtr', 'Medtr8g055930' => 'mtr', 'Medtr8g085850' => 'mtr', 'MELO3C002605.2' => 'cme', 'MELO3C003891.2' => 'cme', 'MELO3C004012.2' => 'cme', 'MELO3C007134.2' => 'cme', 'MELO3C008118.2' => 'cme', 'MELO3C016700.2' => 'cme', 'MELO3C024127.2' => 'cme', 'MELO3C033361.2' => 'cme', 'MELO3C033362.2' => 'cme', 'Migut.C00430' => 'egut', 'Migut.C01246' => 'egut', 'Migut.E00101' => 'egut', 'Migut.H01486' => 'egut', 'Migut.H01939' => 'egut', 'Migut.K00360' => 'egut', 'Migut.M00910' => 'egut', 'Migut.M01139' => 'egut', 'Migut.N02677' => 'egut', 'MSTRG.13252' => 'ama', 'MSTRG.14701' => 'ama', 'MSTRG.1521' => 'ama', 'MSTRG.15884' => 'ama', 'MSTRG.16242' => 'ama', 'MSTRG.22285' => 'ama', 'MSTRG.22444' => 'ama', 'MSTRG.2349' => 'ama', 'MSTRG.26308' => 'ama', 'MSTRG.28296' => 'ama', 'MSTRG.9895' => 'ama', 'Nitab4.5_0000110g0060' => 'nta', 'Nitab4.5_0000420g0130' => 'nta', 'Nitab4.5_0000422g0030' => 'nta', 'Nitab4.5_0000560g0180' => 'nta', 'Nitab4.5_0000703g0100' => 'nta', 'Nitab4.5_0000786g0200' => 'nta', 'Nitab4.5_0001336g0020' => 'nta', 'Nitab4.5_0001796g0030' => 'nta', 'Nitab4.5_0003348g0060' => 'nta', 'Nitab4.5_0003698g0040' => 'nta', 'Nitab4.5_0003942g0090' => 'nta', 'Nitab4.5_0004775g0070' => 'nta', 'Nitab4.5_0004864g0030' => 'nta', 'Nitab4.5_0005615g0020' => 'nta', 'Nitab4.5_0009288g0030' => 'nta', 'Nitab4.5_0009341g0010' => 'nta', 'Nitab4.5_0009535g0010' => 'nta', 'Nn1g03995' => 'nnu', 'Nn1g04100' => 'nnu', 'Nn1g06530' => 'nnu', 'Nn3g16404' => 'nnu', 'Nn3g17212' => 'nnu', 'Nn3g20776' => 'nnu', 'Nn3g21923' => 'nnu', 'Nn5g27737' => 'nnu', 'Nn5g29461' => 'nnu', 'Nn7g38355' => 'nnu', 'Nn8g39873' => 'nnu', 'Oeu000548.2' => 'oeu', 'Oeu004672.1' => 'oeu', 'Oeu015605.2' => 'oeu', 'Oeu016092.1' => 'oeu', 'Oeu017879.3' => 'oeu', 'Oeu024910.1' => 'oeu', 'Oeu028965.1' => 'oeu', 'Oeu031269.1' => 'oeu', 'Oeu031270.1' => 'oeu', 'Oeu032535.1' => 'oeu', 'Oeu034151.1' => 'oeu', 'Oeu034152.1' => 'oeu', 'Oeu034588.2' => 'oeu', 'Oeu050846.1' => 'oeu', 'Oeu050849.2' => 'oeu', 'Oeu051063.2' => 'oeu', 'Oeu052368.1' => 'oeu', 'Oeu052370.1' => 'oeu', 'Os01g0210400' => 'osa', 'Os01g0304300' => 'osa', 'Os01g0749100' => 'osa', 'Os02g0745800' => 'osa', 'Os03g0769050' => 'osa', 'Os05g0531500' => 'osa', 'Os06g0724300' => 'osa', 'Os11g0198100' => 'osa', 'Peaxi162Scf00069g01425' => 'pax', 'Peaxi162Scf00280g00811' => 'pax', 'Peaxi162Scf00310g00615' => 'pax', 'Peaxi162Scf00362g00542' => 'pax', 'Peaxi162Scf00461g00310' => 'pax', 'Peaxi162Scf00530g00118' => 'pax', 'Peaxi162Scf00541g00057' => 'pax', 'Peaxi162Scf00661g00017' => 'pax', 'Peaxi162Scf00926g00027' => 'pax', 'Peaxi162Scf01064g00263' => 'pax', 'Peaxi162Scf01211g00135' => 'pax', 'PGR004G2336' => 'pgr', 'PGR042G0327' => 'pgr', 'PGR042G1957' => 'pgr', 'PGR042G2003' => 'pgr', 'PGR042G3929' => 'pgr', 'PGR083G1137' => 'pgr', 'PGR083G1364' => 'pgr', 'PGSC0003DMG400003381' => 'stu', 'PGSC0003DMG400003417' => 'stu', 'PGSC0003DMG400008981' => 'stu', 'PGSC0003DMG400012417' => 'stu', 'PGSC0003DMG400012823' => 'stu', 'PGSC0003DMG400016885' => 'stu', 'PGSC0003DMG400022812' => 'stu', 'PGSC0003DMG400029726' => 'stu', 'PGSC0003DMG401009243' => 'stu', 'PGSC0003DMG401031505' => 'stu', 'PGSC0003DMG402031505' => 'stu', 'Phvul.001G017600' => 'pvu', 'Phvul.002G193500' => 'pvu', 'Phvul.002G228900' => 'pvu', 'Phvul.002G236800' => 'pvu', 'Phvul.003G049500' => 'pvu', 'Phvul.005G072000' => 'pvu', 'Phvul.006G164800' => 'pvu', 'Phvul.006G185100' => 'pvu', 'Phvul.007G090000' => 'pvu', 'Potri.001G399800' => 'ptr', 'Potri.002G149900' => 'ptr', 'Potri.004G044100' => 'ptr', 'Potri.004G177600' => 'ptr', 'Potri.009G138000' => 'ptr', 'Potri.010G094000' => 'ptr', 'Potri.011G053000' => 'ptr', 'Potri.011G119300' => 'ptr', 'Potri.013G113700' => 'ptr', 'Potri.018G107800' => 'ptr', 'Potri.019G084100' => 'ptr', 'Pp3c14_23720' => 'ppa', 'Pp3c16_6340' => 'ppa', 'Pp3c23_13420' => 'ppa', 'Pp3c24_2740' => 'ppa', 'Pp3c25_860' => 'ppa', 'Pp3c8_21750' => 'ppa', 'Prupe.1G273000' => 'ppe', 'Prupe.1G273700' => 'ppe', 'Prupe.1G274100' => 'ppe', 'Prupe.2G023300' => 'ppe', 'Prupe.4G048000' => 'ppe', 'Prupe.4G080400' => 'ppe', 'Prupe.4G181200' => 'ppe', 'Prupe.8G056900' => 'ppe', 'Prupe.8G168700' => 'ppe', 'Psat1g189080' => 'psa', 'Psat1g204760' => 'psa', 'Psat4g175560' => 'psa', 'Psat4g177720' => 'psa', 'Psat5g244240' => 'psa', 'Psat6g010720' => 'psa', 'Psat6g187200' => 'psa', 'Psat7g072040' => 'psa', 'PSO017G3501' => 'pso', 'PSO063G2148' => 'pso', 'PSO063G5608' => 'pso', 'PSO210G6392' => 'pso', 'PSO541G2319' => 'pso', 'PSO541G2836' => 'pso', 'PSO541G4012' => 'pso', 'PSO541G6253' => 'pso', 'PSO675G0580' => 'pso', 'PSO675G0856' => 'pso', 'PSO675G5635' => 'pso', 'PSO675G9157' => 'pso', 'PSO832G1660' => 'pso', 'PSO832G1969' => 'pso', 'QL02p007186' => 'qlo', 'QL02p033904' => 'qlo', 'QL03p064391' => 'qlo', 'QL05p040593' => 'qlo', 'QL05p058242' => 'qlo', 'QL08p021825' => 'qlo', 'QL11p004981' => 'qlo', 'RcHm_v2.0_Chr1g0318301' => 'rch', 'RcHm_v2.0_Chr4g0418501' => 'rch', 'RcHm_v2.0_Chr4g0439971' => 'rch', 'RcHm_v2.0_Chr5g0008541' => 'rch', 'RcHm_v2.0_Chr5g0014101' => 'rch', 'RcHm_v2.0_Chr5g0014131' => 'rch', 'RcHm_v2.0_Chr5g0033621' => 'rch', 'RcHm_v2.0_Chr6g0272041' => 'rch', 'RcHm_v2.0_Chr6g0278831' => 'rch', 'Rhsim02G0130400' => 'rsi', 'Rhsim02G0171100' => 'rsi', 'Rhsim05G0053000' => 'rsi', 'Rhsim05G0053100' => 'rsi', 'Rhsim06G0096500' => 'rsi', 'Rhsim06G0096600' => 'rsi', 'Rhsim06G0199100' => 'rsi', 'Rhsim12G0062300' => 'rsi', 'Rhsim12G0062800' => 'rsi', 'Sabra02G0118600' => 'sbr', 'Sabra04G0027300' => 'sbr', 'Sabra04G0119500' => 'sbr', 'Sabra08G0112500' => 'sbr', 'Sabra11G0036800' => 'sbr', 'Sabra11G0103800' => 'sbr', 'Sabra13G0096300' => 'sbr', 'Sabra16G0262300' => 'sbr', 'Sabra18G0091700' => 'sbr', 'Sabra19G0095400' => 'sbr', 'SalBow6G3080' => 'sbo', 'SalBow7G1157' => 'sbo', 'SalBow7G2123' => 'sbo', 'SalBow7G2285' => 'sbo', 'SalBow7G3537' => 'sbo', 'SalBow8G2947' => 'sbo', 'SalBow8G4463' => 'sbo', 'SalBow8G5466' => 'sbo', 'Sc01g0001750' => 'sci', 'Sc02g0006640' => 'sci', 'Sc02g0006670' => 'sci', 'Sc04g0008220' => 'sci', 'Sc05g0006190' => 'sci', 'Sc08g0002760' => 'sci', 'Sc17g0006170' => 'sci', 'Sc22g0002050' => 'sci', 'Sc23g0001190' => 'sci', 'Sc24g0000980' => 'sci', 'Sed0006245' => 'sed', 'Sed0007543' => 'sed', 'Sed0009411' => 'sed', 'Sed0010765' => 'sed', 'Sed0012944' => 'sed', 'Sed0014682' => 'sed', 'Sed0016174' => 'sed', 'Sed0016796' => 'sed', 'Sed0020317' => 'sed', 'Sed0021467' => 'sed', 'SEGI_01316' => 'sgi', 'SEGI_03374' => 'sgi', 'SEGI_16265' => 'sgi', 'SEGI_18569' => 'sgi', 'SEGI_20351' => 'sgi', 'SEGI_26395' => 'sgi', 'SEGI_29469' => 'sgi', 'SEGI_34771' => 'sgi', 'SEGI_36769' => 'sgi', 'SEGI_37139' => 'sgi', 'SGA_v2.0_scaffold100G29687' => 'sas', 'SGA_v2.0_scaffold118G32472' => 'sas', 'SGA_v2.0_scaffold14G07051' => 'sas', 'SGA_v2.0_scaffold183G39845' => 'sas', 'SGA_v2.0_scaffold1G00174' => 'sas', 'SGA_v2.0_scaffold22G09714' => 'sas', 'SGA_v2.0_scaffold333G48992' => 'sas', 'SGA_v2.0_scaffold46G17491' => 'sas', 'SGA_v2.0_scaffold49G18294' => 'sas', 'SGA_v2.0_scaffold63G21658' => 'sas', 'SHI01741' => 'shi', 'SHI05771' => 'shi', 'SHI18077' => 'shi', 'SHI20525' => 'shi', 'SHI20527' => 'shi', 'SHI20528' => 'shi', 'SMO172G0185' => 'smo', 'SMO198G0020' => 'smo', 'SMO351G0006' => 'smo', 'SMO356G0118' => 'smo', 'SMO358G0296' => 'smo', 'SMO367G0079' => 'smo', 'SMO367G1277' => 'smo', 'Solyc01g014220.3' => 'sly', 'Solyc01g111770.2' => 'sly', 'Solyc02g078180.3' => 'sly', 'Solyc03g006430.3' => 'sly', 'Solyc03g006456.1' => 'sly', 'Solyc03g079860.2' => 'sly', 'Solyc04g079770.3' => 'sly', 'Solyc05g007430.4' => 'sly', 'Solyc07g063150.3' => 'sly', 'Solyc08g016620.3' => 'sly', 'Solyc09g057590.3' => 'sly', 'Solyc09g057600.1' => 'sly', 'Solyc10g009050.3' => 'sly', 'Solyc11g017420.2' => 'sly', 'Sopen01g053810' => 'spe', 'Sopen02g023040' => 'spe', 'Sopen03g002440' => 'spe', 'Sopen04g033350' => 'spe', 'Sopen05g003310' => 'spe', 'Sopen07g004050' => 'spe', 'Sopen07g031340' => 'spe', 'Sopen08g006990' => 'spe', 'Sopen10g004830' => 'spe', 'Sopen11g009370' => 'spe', 'Sp1g24450' => 'spa', 'Sp1g29670' => 'spa', 'Sp1g39600' => 'spa', 'Sp2g11080' => 'spa', 'Sp2g13970' => 'spa', 'Sp4g16130' => 'spa', 'Sp6g13080' => 'spa', 'Sp7g37270' => 'spa', 'TAR371G0065' => 'tar', 'TAR376G0340' => 'tar', 'TAR376G0435' => 'tar', 'TAR381G0002' => 'tar', 'TAR381G1236' => 'tar', 'TAR624G0055' => 'tar', 'TAR624G0324' => 'tar', 'TAR624G0696' => 'tar', 'TAR624G0906' => 'tar', 'TAR625G0107' => 'tar', 'TAR626G0015' => 'tar', 'TAR626G1356' => 'tar', 'TAR627G0888' => 'tar', 'TAR628G0399' => 'tar', 'TAR628G1327' => 'tar', 'TAR629G2831' => 'tar', 'TAR629G2874' => 'tar', 'TAR633G1432' => 'tar', 'TAR633G2771' => 'tar', 'THA.LOC104803394' => 'tha', 'THA.LOC104805153' => 'tha', 'THA.LOC104806784' => 'tha', 'THA.LOC104810473' => 'tha', 'THA.LOC104813100' => 'tha', 'THA.LOC104814215' => 'tha', 'THA.LOC104815554' => 'tha', 'THA.LOC104820544' => 'tha', 'THA.LOC104824754' => 'tha', 'THA.LOC104827717' => 'tha', 'Thecc.02G031400' => 'tca', 'Thecc.02G055900' => 'tca', 'Thecc.02G350800' => 'tca', 'Thecc.06G150900' => 'tca', 'Thecc.06G186600' => 'tca', 'Thecc.07G089600' => 'tca', 'Thecc.08G020400' => 'tca', 'Thecc.08G182100' => 'tca', 'Thhalv10000873m.g' => 'esa', 'Thhalv10004185m.g' => 'esa', 'Thhalv10006981m.g' => 'esa', 'Thhalv10007204m.g' => 'esa', 'Thhalv10011374m.g' => 'esa', 'Thhalv10013482m.g' => 'esa', 'Thhalv10017801m.g' => 'esa', 'Thhalv10024983m.g' => 'esa', 'TPR.G12072' => 'tpr', 'TPR.G15769' => 'tpr', 'TPR.G16504' => 'tpr', 'TPR.G16506' => 'tpr', 'TPR.G24345' => 'tpr', 'TPR.G26666' => 'tpr', 'TPR.G27320' => 'tpr', 'TPR.G31819' => 'tpr', 'TPR.G38879' => 'tpr', 'TPR.G39015' => 'tpr', 'TPR.G8819' => 'tpr', 'TWI09G0924' => 'twi', 'TWI12G0811' => 'twi', 'TWI12G1294' => 'twi', 'TWI31G0150' => 'twi', 'TWI36G1262' => 'twi', 'TWI38G1287' => 'twi', 'TWI38G1633' => 'twi', 'TWI38G1982' => 'twi', 'TWI39G0116' => 'twi', 'TWI60G1011' => 'twi', 'TWI63G0171' => 'twi', 'TWI73G0839' => 'twi', 'TWI79G1511' => 'twi', 'unitig_0.g915' => 'ugi', 'unitig_0.g916' => 'ugi', 'unitig_21.g20219' => 'ugi', 'unitig_21.g20416' => 'ugi', 'unitig_578.g16132' => 'ugi', 'unitig_578.g16718' => 'ugi', 'unitig_62.g23481' => 'ugi', 'unitig_744.g24535' => 'ugi', 'unitig_749.g13525' => 'ugi', 'vmacro01248' => 'vma', 'vmacro02290' => 'vma', 'vmacro10946' => 'vma', 'vmacro11865' => 'vma', 'vmacro12493' => 'vma', 'vmacro17322' => 'vma', 'vmacro21599' => 'vma', 'vmacro23041' => 'vma', 'VMungo0251G0004' => 'vmu', 'VMungo0251G2639' => 'vmu', 'VMungo0251G2967' => 'vmu', 'VMungo0540G0864' => 'vmu', 'VMungo0540G1569' => 'vmu', 'VMungo0647G0317' => 'vmu', 'VMungo0720G1373' => 'vmu', 'VMungo0720G1508' => 'vmu', 'VMungo1080G0485' => 'vmu', 'VMungo1215G3177' => 'vmu', 'Zm00001eb112600' => 'zma', 'Zm00001eb120220' => 'zma', 'Zm00001eb153240' => 'zma', 'Zm00001eb168880' => 'zma', 'Zm00001eb213920' => 'zma', 'Zm00001eb228280' => 'zma', 'Zm00001eb254580' => 'zma', 'Zm00001eb272180' => 'zma', 'Zm00001eb293190' => 'zma', 'Zm00001eb322930' => 'zma', 'Zm00001eb353360' => 'zma', 'Zm00001eb353390' => 'zma', 'Zm00001eb353430' => 'zma', 'Zm00001eb353440' => 'zma', 'Zm00001eb353780' => 'zma' ) $gf_id = 'HOM05D000499' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000499' ) $data_identifier = 'HOM05D000499' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 29, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 12, 'amhyb' => (int) 8, 'aly' => (int) 12, 'aox' => (int) 9, 'arhy' => (int) 26, 'ath' => (int) 8, 'atr' => (int) 7, 'acertr' => (int) 10, 'cqu' => (int) 15, 'bca' => (int) 29, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 11, 'cansat' => (int) 8, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 9, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 8, 'cpa' => (int) 10, 'csa' => (int) 7, 'camsi' => (int) 20, 'dca' => (int) 8, 'din' => (int) 12, 'dzi' => (int) 14, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 6, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 38, 'gra' => (int) 16, 'vvi' => (int) 8, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 5, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 11, 'lja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 11, 'mpo' => (int) 3, 'mbi' => (int) 14, 'mdo' => (int) 14, 'mtr' => (int) 8, 'cme' => (int) 9, 'egut' => (int) 9, 'ama' => (int) 11, 'nta' => (int) 17, 'nnu' => (int) 11, 'oeu' => (int) 18, 'osa' => (int) 8, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 6, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 9, 'rsi' => (int) 9, 'sbr' => (int) 10, 'sbo' => (int) 8, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 10, 'sas' => (int) 10, 'shi' => (int) 6, 'smo' => (int) 7, 'sly' => (int) 14, 'spe' => (int) 10, 'spa' => (int) 8, 'tar' => (int) 19, 'tha' => (int) 10, 'tca' => (int) 8, 'esa' => (int) 8, 'tpr' => (int) 11, 'twi' => (int) 13, 'ugi' => (int) 9, 'vma' => (int) 8, 'vmu' => (int) 10, 'zma' => (int) 15 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb353780' $species_info = array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ) $local_species = 'tpr' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000499', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1066', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p29780' => 'bna', 'A02p33180' => 'bna', 'A03p16470' => 'bna', 'A03p66010' => 'bna', 'A04p25970' => 'bna', 'A06p01270' => 'bna', 'A06p46080' => 'bna', 'A07p11400' => 'bna', 'A08p01840' => 'bna', 'A08p08230' => 'bna', 'A08p25740' => 'bna', 'A09p32070' => 'bna', 'A09p37830' => 'bna', 'A09p42840' => 'bna', 'A09p42850' => 'bna', 'Aa31LG10G2060' => 'aar', 'Aa31LG2G7410' => 'aar', 'Aa31LG6G10200' => 'aar', 'Aa31LG6G16680' => 'aar', 'Aa31LG6G8470' => 'aar', 'Aa31LG9G12730' => 'aar', 'Aa31LG9G13680' => 'aar', 'Aa31LG9G14920' => 'aar', 'Aa31LG9G6650' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4977' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5467' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3254' => 'aag', 'Actinidia02578' => 'ach', 'Actinidia07693' => 'ach', 'Actinidia08413' => 'ach', 'Actinidia08414' => 'ach', 'Actinidia15289' => 'ach', 'Actinidia19871' => 'ach', 'Actinidia21475' => 'ach', 'Actinidia22576' => 'ach', 'Actinidia28327' => 'ach', 'Actinidia32491' => 'ach', 'Actinidia39463' => 'ach', 'Actinidia39571' => 'ach', 'Ah.01g013750' => 'amhyb', 'Ah.01g023210' => 'amhyb', 'Ah.04g164850' => 'amhyb', 'Ah.05g178060' => 'amhyb', 'Ah.07g204270' => 'amhyb', 'Ah.07g208480' => 'amhyb', 'Ah.09g237410' => 'amhyb', 'Ah.14g089460' => 'amhyb', 'AL1G41790' => 'aly', 'AL1G49050' => 'aly', 'AL1G53810' => 'aly', 'AL1G61400' => 'aly', 'AL4G18580' => 'aly', 'AL5G12510' => 'aly', 'AL5G12540' => 'aly', 'AL6G43230' => 'aly', 'AL7G10370' => 'aly', 'AL7G19250' => 'aly', 'AL8G12240' => 'aly', 'AL8G18540' => 'aly', 'Aqoxy1G02409' => 'aox', 'Aqoxy2G03993' => 'aox', 'Aqoxy3G03357' => 'aox', 'Aqoxy4G00785' => 'aox', 'Aqoxy5G02598' => 'aox', 'Aqoxy6G00132' => 'aox', 'Aqoxy7G01776' => 'aox', 'Aqoxy7G02316' => 'aox', 'Aqoxy7G03973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.12AFKW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B8730' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27IQR1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3F75VG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3RE0GA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41TCQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.527VTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FIR39' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5W8UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DA38EV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ63HS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H1I32C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HC27T5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4M8AP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7N3CZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9UVDZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LS1NQA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT1D4B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SKC4TM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCFV76' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF9Q1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQWD9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1ZM88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WE07RT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YCK7VH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJE6Q6' => 'arhy', 'AT1G28240' => 'ath', 'AT1G34550' => 'ath', 'AT1G53040' => 'ath', 'AT2G02910' => 'ath', 'AT4G09630' => 'ath', 'AT4G38500' => 'ath', 'AT5G42660' => 'ath', 'AT5G46220' => 'ath', 'ATR0152G026' => 'atr', 'ATR0564G343' => 'atr', 'ATR0706G151' => 'atr', 'ATR0733G207' => 'atr', 'ATR0751G234' => 'atr', 'ATR0807G048' => 'atr', 'ATR1091G084' => 'atr', 'Atru.chr10.1229' => 'acertr', 'Atru.chr10.1230' => 'acertr', 'Atru.chr10.1874' => 'acertr', 'Atru.chr11.1808' => 'acertr', 'Atru.chr13.1795' => 'acertr', 'Atru.chr13.570' => 'acertr', 'Atru.chr2.2608' => 'acertr', 'Atru.chr2.2609' => 'acertr', 'Atru.chr5.3428' => 'acertr', 'Atru.chr8.1171' => 'acertr', 'AUR62004651' => 'cqu', 'AUR62008675' => 'cqu', 'AUR62010014' => 'cqu', 'AUR62013004' => 'cqu', 'AUR62014825' => 'cqu', 'AUR62015015' => 'cqu', 'AUR62015151' => 'cqu', 'AUR62017020' => 'cqu', 'AUR62019422' => 'cqu', 'AUR62023570' => 'cqu', 'AUR62025571' => 'cqu', 'AUR62029098' => 'cqu', 'AUR62033863' => 'cqu', 'AUR62034296' => 'cqu', 'AUR62040075' => 'cqu', 'BcaB02g07334' => 'bca', 'BcaB02g10575' => 'bca', 'BcaB03g12119' => 'bca', 'BcaB03g12120' => 'bca', 'BcaB03g13945' => 'bca', 'BcaB04g17123' => 'bca', 'BcaB04g17867' => 'bca', 'BcaB04g19839' => 'bca', 'BcaB07g30317' => 'bca', 'BcaB07g32432' => 'bca', 'BcaB07g33362' => 'bca', 'BcaB08g36611' => 'bca', 'BcaC01g00028' => 'bca', 'BcaC01g01356' => 'bca', 'BcaC01g02034' => 'bca', 'BcaC01g06051' => 'bca', 'BcaC03g16839' => 'bca', 'BcaC03g17176' => 'bca', 'BcaC05g26829' => 'bca', 'BcaC06g31490' => 'bca', 'BcaC06g35344' => 'bca', 'BcaC06g36570' => 'bca', 'BcaC07g37537' => 'bca', 'BcaC08g43491' => 'bca', 'BcaC08g43773' => 'bca', 'BcaNung00234' => 'bca', 'BcaNung01982' => 'bca', 'BcaNung03707' => 'bca', 'BcaNung06454' => 'bca', 'BolC2t10762H' => 'bol', 'BolC2t11191H' => 'bol', 'BolC3t14322H' => 'bol', 'BolC3t19747H' => 'bol', 'BolC3t21425H' => 'bol', 'BolC4t27800H' => 'bol', 'BolC5t31423H' => 'bol', 'BolC6t35951H' => 'bol', 'BolC6t36282H' => 'bol', 'BolC7t40678H' => 'bol', 'BolC7t40679H' => 'bol', 'BolC7t42222H' => 'bol', 'BolC7t43492H' => 'bol', 'BolC7t46785H' => 'bol', 'BolC8t47853H' => 'bol', 'BolC9t56805H' => 'bol', 'BraA02t08000Z' => 'bra', 'BraA02t08341Z' => 'bra', 'BraA03t10936Z' => 'bra', 'BraA03t15657Z' => 'bra', 'BraA04t18100Z' => 'bra', 'BraA05t20523Z' => 'bra', 'BraA06t23353Z' => 'bra', 'BraA06t27473Z' => 'bra', 'BraA06t27769Z' => 'bra', 'BraA07t28928Z' => 'bra', 'BraA08t32236Z' => 'bra', 'BraA08t32841Z' => 'bra', 'BraA08t34524Z' => 'bra', 'BraA09t38742Z' => 'bra', 'BraA09t39295Z' => 'bra', 'C02p47180' => 'bna', 'C02p50990' => 'bna', 'C03p19360' => 'bna', 'C03p74950' => 'bna', 'C03p91000' => 'bna', 'C04p63260' => 'bna', 'C05p27050' => 'bna', 'C06p08750' => 'bna', 'C06p11490' => 'bna', 'C07p02820' => 'bna', 'C07p17180' => 'bna', 'C07p29440' => 'bna', 'C07p63730' => 'bna', 'C09p39260' => 'bna', 'CAN.G1164.34' => 'can', 'CAN.G1164.39' => 'can', 'CAN.G1530.3' => 'can', 'CAN.G162.61' => 'can', 'CAN.G176.6' => 'can', 'CAN.G289.49' => 'can', 'CAN.G370.21' => 'can', 'CAN.G370.22' => 'can', 'CAN.G371.117' => 'can', 'CAN.G58.37' => 'can', 'CAN.G588.98' => 'can', 'CANSAT21G2266' => 'cansat', 'CANSAT25G2799' => 'cansat', 'CANSAT35G0862' => 'cansat', 'CANSAT35G1704' => 'cansat', 'CANSAT35G1760' => 'cansat', 'CANSAT56G3971' => 'cansat', 'CANSAT56G4116' => 'cansat', 'CANSAT80G1259' => 'cansat', 'CARHR027730' => 'chi', 'CARHR033880' => 'chi', 'CARHR043270' => 'chi', 'CARHR145330' => 'chi', 'CARHR145340' => 'chi', 'CARHR175570' => 'chi', 'CARHR181570' => 'chi', 'CARHR258470' => 'chi', 'CARHR260490' => 'chi', 'CARHR294220' => 'chi', 'Carub.0001s2668' => 'cru', 'Carub.0001s3257' => 'cru', 'Carub.0001s4220' => 'cru', 'Carub.0005s0179' => 'cru', 'Carub.0006s2807' => 'cru', 'Carub.0007s0039' => 'cru', 'Carub.0008s0169' => 'cru', 'Carub.0008s0636' => 'cru', 'Ca_00338_v3' => 'car', 'Ca_00542_v3' => 'car', 'Ca_01844_v3' => 'car', 'Ca_10611_v3' => 'car', 'Ca_13326_v3' => 'car', 'Ca_17944_v3' => 'car', 'Ca_18546_v3' => 'car', 'Ca_24219_v3' => 'car', 'Ca_29972_v3' => 'car', 'CBR_g3681' => 'cbr', 'CBR_g40021' => 'cbr', 'Cc01_g08140' => 'ccan', 'Cc02_g13410' => 'ccan', 'Cc02_g37480' => 'ccan', 'Cc05_g12030' => 'ccan', 'Cc09_g03370' => 'ccan', 'Cc09_g10300' => 'ccan', 'Cc10_g03530' => 'ccan', 'Cc10_g11380' => 'ccan', 'CDE01G0176' => 'cde', 'CDE02G0675' => 'cde', 'CDE02G0942' => 'cde', 'CDE02G1153' => 'cde', 'CDE02G4177' => 'cde', 'CDE04G2117' => 'cde', 'CDE04G2736' => 'cde', 'CDE08G1161' => 'cde', 'CDE09G1238' => 'cde', 'Cfa000467' => 'cfa', 'Cfa000947' => 'cfa', 'Cfa004969' => 'cfa', 'Cfa005284' => 'cfa', 'Cfa008993' => 'cfa', 'Cfa018187' => 'cfa', 'Cfa018454' => 'cfa', 'Cfa020585' => 'cfa', 'Ciclev10000424m.g' => 'ccl', 'Ciclev10003605m.g' => 'ccl', 'Ciclev10007828m.g' => 'ccl', 'Ciclev10014620m.g' => 'ccl', 'Ciclev10015169m.g' => 'ccl', 'Ciclev10018291m.g' => 'ccl', 'Ciclev10028256m.g' => 'ccl', 'Ciclev10033822m.g' => 'ccl', 'CiPaw.05G060300' => 'cil', 'CiPaw.05G085000' => 'cil', 'CiPaw.06G083700' => 'cil', 'CiPaw.06G120300' => 'cil', 'CiPaw.09G060500' => 'cil', 'CiPaw.09G123800' => 'cil', 'CiPaw.11G169700' => 'cil', 'CiPaw.12G118300' => 'cil', 'CiPaw.15G071000' => 'cil', 'CiPaw.15G081900' => 'cil', 'ClCG01G024610' => 'cla', 'ClCG03G006070' => 'cla', 'ClCG05G019250' => 'cla', 'ClCG09G009500' => 'cla', 'ClCG11G008200' => 'cla', 'ClCG11G018080' => 'cla', 'COL.COLO4_17373' => 'col', 'COL.COLO4_22994' => 'col', 'COL.COLO4_26389' => 'col', 'COL.COLO4_27170' => 'col', 'COL.COLO4_31074' => 'col', 'COL.COLO4_31465' => 'col', 'COL.COLO4_36438' => 'col', 'COL.COLO4_36439' => 'col', 'Cpa.g.c38781' => 'cpa', 'Cpa.g.sc128.12' => 'cpa', 'Cpa.g.sc166.7' => 'cpa', 'Cpa.g.sc166.8' => 'cpa', 'Cpa.g.sc20.111' => 'cpa', 'Cpa.g.sc27.31' => 'cpa', 'Cpa.g.sc64.36' => 'cpa', 'Cpa.g.sc64.37' => 'cpa', 'Cpa.g.sc66.49' => 'cpa', 'Cpa.g.sc80.64' => 'cpa', 'CsaV3_1G012320' => 'csa', 'CsaV3_2G008480' => 'csa', 'CsaV3_2G033450' => 'csa', 'CsaV3_3G044830' => 'csa', 'CsaV3_4G033710' => 'csa', 'CsaV3_6G051730' => 'csa', 'CsaV3_7G025350' => 'csa', 'CSS0001067' => 'camsi', 'CSS0005996' => 'camsi', 'CSS0006590' => 'camsi', 'CSS0009673' => 'camsi', 'CSS0010201' => 'camsi', 'CSS0010549' => 'camsi', 'CSS0011364' => 'camsi', 'CSS0014473' => 'camsi', 'CSS0014961' => 'camsi', 'CSS0020191' => 'camsi', 'CSS0021165' => 'camsi', 'CSS0022306' => 'camsi', 'CSS0030591' => 'camsi', 'CSS0030696' => 'camsi', 'CSS0032653' => 'camsi', 'CSS0037487' => 'camsi', 'CSS0041102' => 'camsi', 'CSS0041261' => 'camsi', 'CSS0046246' => 'camsi', 'CSS0049256' => 'camsi', 'DCAR_004075' => 'dca', 'DCAR_011538' => 'dca', 'DCAR_019553' => 'dca', 'DCAR_020952' => 'dca', 'DCAR_021739' => 'dca', 'DCAR_027407' => 'dca', 'DCAR_027913' => 'dca', 'DCAR_028066' => 'dca', 'Dinv05899' => 'din', 'Dinv07563' => 'din', 'Dinv08010' => 'din', 'Dinv14125' => 'din', 'Dinv20172' => 'din', 'Dinv30743' => 'din', 'Dinv31229' => 'din', 'Dinv34162' => 'din', 'Dinv36028' => 'din', 'Dinv39368' => 'din', 'Dinv40565' => 'din', 'Dinv41706' => 'din', 'Duzib052G0089' => 'dzi', 'Duzib116G0641' => 'dzi', 'Duzib132G0069' => 'dzi', 'Duzib132G1219' => 'dzi', 'Duzib147G0278' => 'dzi', 'Duzib160G0480' => 'dzi', 'Duzib170G0661' => 'dzi', 'Duzib177G0591' => 'dzi', 'Duzib187G1353' => 'dzi', 'Duzib192G0858' => 'dzi', 'Duzib192G0883' => 'dzi', 'Duzib213G0506' => 'dzi', 'Duzib235G0289' => 'dzi', 'Duzib251G0422' => 'dzi', 'ECA232G3898' => 'eca', 'ECA233G5950' => 'eca', 'ECA234G1699' => 'eca', 'ECA234G2421' => 'eca', 'ECA236G0426' => 'eca', 'ECA236G4331' => 'eca', 'ECA248G2573' => 'eca', 'EL10Ac1g00077' => 'bvu', 'EL10Ac1g01746' => 'bvu', 'EL10Ac2g03464' => 'bvu', 'EL10Ac4g08176' => 'bvu', 'EL10Ac7g17521' => 'bvu', 'EL10Ac8g20386' => 'bvu', 'EL10Ac9g21343' => 'bvu', 'EL10Ac9g22688' => 'bvu', 'Eucgr.B03434' => 'egr', 'Eucgr.D00618' => 'egr', 'Eucgr.E02395' => 'egr', 'Eucgr.F01129' => 'egr', 'Eucgr.F02622' => 'egr', 'Eucgr.F04207' => 'egr', 'FAN01G0570' => 'fan', 'FAN03G3351' => 'fan', 'FAN06G3702' => 'fan', 'FAN07G2149' => 'fan', 'FAN10G3758' => 'fan', 'FAN11G1170' => 'fan', 'FAN11G2050' => 'fan', 'FAN11G2724' => 'fan', 'FAN12G1700' => 'fan', 'FAN12G2028' => 'fan', 'FAN15G1160' => 'fan', 'FAN15G3063' => 'fan', 'FAN16G2540' => 'fan', 'FAN16G3077' => 'fan', 'FAN16G3624' => 'fan', 'FAN17G0221' => 'fan', 'FAN20G2492' => 'fan', 'FAN20G2905' => 'fan', 'FAN21G0548' => 'fan', 'FAN21G1300' => 'fan', 'FAN22G0077' => 'fan', 'FAN22G1315' => 'fan', 'FAN24G1280' => 'fan', 'FAN24G1445' => 'fan', 'FAN24G3527' => 'fan', 'FAN25G0464' => 'fan', 'FAN25G2885' => 'fan', 'FAN25G3270' => 'fan', 'FAN27G1101' => 'fan', 'FAN27G2846' => 'fan', 'FAN27G3524' => 'fan', 'FvH4_2g11770' => 'fve', 'FvH4_2g15630' => 'fve', 'FvH4_3g05570' => 'fve', 'FvH4_3g09110' => 'fve', 'FvH4_3g19940' => 'fve', 'FvH4_4g04821' => 'fve', 'FvH4_4g31480' => 'fve', 'FvH4_7g01740' => 'fve', 'Glyma.05G130400' => 'gma', 'Glyma.05G156400' => 'gma', 'Glyma.07G197000' => 'gma', 'Glyma.08G085151' => 'gma', 'Glyma.08G114500' => 'gma', 'Glyma.08G300400' => 'gma', 'Glyma.10G215800' => 'gma', 'Glyma.12G224400' => 'gma', 'Glyma.13G179300' => 'gma', 'Glyma.13G218151' => 'gma', 'Glyma.13G238800' => 'gma', 'Glyma.13G276900' => 'gma', 'Glyma.14G078200' => 'gma', 'Glyma.15G074500' => 'gma', 'Glyma.15G094100' => 'gma', 'Glyma.17G247200' => 'gma', 'Glyma.18G120100' => 'gma', 'Glyma.20G176000' => 'gma', 'Gohir.A01G063600' => 'ghi', 'Gohir.A01G170301' => 'ghi', 'Gohir.A02G060500' => 'ghi', 'Gohir.A05G133850' => 'ghi', 'Gohir.A05G161400' => 'ghi', 'Gohir.A06G012900' => 'ghi', 'Gohir.A06G035901' => 'ghi', 'Gohir.A06G127100' => 'ghi', 'Gohir.A06G210500' => 'ghi', 'Gohir.A08G008650' => 'ghi', 'Gohir.A09G072700' => 'ghi', 'Gohir.A09G088301' => 'ghi', 'Gohir.A10G040600' => 'ghi', 'Gohir.A12G036300' => 'ghi', 'Gohir.A12G143350' => 'ghi', 'Gohir.A12G165500' => 'ghi', 'Gohir.A13G145700' => 'ghi', 'Gohir.D01G050000' => 'ghi', 'Gohir.D01G051366' => 'ghi', 'Gohir.D01G161350' => 'ghi', 'Gohir.D02G065900' => 'ghi', 'Gohir.D05G164200' => 'ghi', 'Gohir.D05G355500' => 'ghi', 'Gohir.D06G010400' => 'ghi', 'Gohir.D06G111250' => 'ghi', 'Gohir.D06G132000' => 'ghi', 'Gohir.D06G210500' => 'ghi', 'Gohir.D07G165675' => 'ghi', 'Gohir.D08G062240' => 'ghi', 'Gohir.D08G086101' => 'ghi', 'Gohir.D08G138060' => 'ghi', 'Gohir.D09G072300' => 'ghi', 'Gohir.D10G041400' => 'ghi', 'Gohir.D11G191020' => 'ghi', 'Gohir.D11G212066' => 'ghi', 'Gohir.D12G036300' => 'ghi', 'Gohir.D12G168600' => 'ghi', 'Gohir.D13G150600' => 'ghi', 'Gorai.001G057300' => 'gra', 'Gorai.002G069900' => 'gra', 'Gorai.002G200000' => 'gra', 'Gorai.003G067600' => 'gra', 'Gorai.005G074800' => 'gra', 'Gorai.006G087300' => 'gra', 'Gorai.008G037500' => 'gra', 'Gorai.008G181400' => 'gra', 'Gorai.009G169400' => 'gra', 'Gorai.009G387900' => 'gra', 'Gorai.010G013300' => 'gra', 'Gorai.010G153800' => 'gra', 'Gorai.010G255800' => 'gra', 'Gorai.011G043700' => 'gra', 'Gorai.011G198900' => 'gra', 'Gorai.013G168400' => 'gra', 'GSVIVG01005212001' => 'vvi', 'GSVIVG01006163001' => 'vvi', 'GSVIVG01009625001' => 'vvi', 'GSVIVG01014338001' => 'vvi', 'GSVIVG01020005001' => 'vvi', 'GSVIVG01021450001' => 'vvi', 'GSVIVG01023975001' => 'vvi', 'GSVIVG01034490001' => 'vvi', 'HanXRQChr04g0112071' => 'han', 'HanXRQChr05g0131151' => 'han', 'HanXRQChr09g0262371' => 'han', 'HanXRQChr09g0268401' => 'han', 'HanXRQChr10g0279241' => 'han', 'HanXRQChr10g0297961' => 'han', 'HanXRQChr11g0326231' => 'han', 'HanXRQChr11g0328471' => 'han', 'HanXRQChr16g0507941' => 'han', 'HanXRQChr17g0560211' => 'han', 'Haze_02108' => 'cav', 'Haze_02428' => 'cav', 'Haze_05593' => 'cav', 'Haze_06448' => 'cav', 'Haze_09427' => 'cav', 'Haze_12022' => 'cav', 'Haze_17612' => 'cav', 'Haze_17928' => 'cav', 'Hma1.2p1_0032F.1_g019250' => 'hma', 'Hma1.2p1_0163F.1_g072690' => 'hma', 'Hma1.2p1_0265F.1_g106710' => 'hma', 'Hma1.2p1_0286F.1_g113970' => 'hma', 'Hma1.2p1_0363F.1_g136640' => 'hma', 'Hma1.2p1_0584F.1_g183470' => 'hma', 'Hma1.2p1_0885F.1_g232570' => 'hma', 'HPP92_006022' => 'vpl', 'HPP92_007320' => 'vpl', 'HPP92_011521' => 'vpl', 'HPP92_019387' => 'vpl', 'HPP92_024038' => 'vpl', 'Hund05891' => 'sun', 'Hund06450' => 'sun', 'Hund12053' => 'sun', 'Hund16800' => 'sun', 'Hund21222' => 'sun', 'Hund22896' => 'sun', 'Hund23746' => 'sun', 'Hund27083' => 'sun', 'Lalb_Chr02g0141831' => 'lal', 'Lalb_Chr02g0141841' => 'lal', 'Lalb_Chr05g0220411' => 'lal', 'Lalb_Chr06g0162081' => 'lal', 'Lalb_Chr09g0327651' => 'lal', 'Lalb_Chr13g0295051' => 'lal', 'Lalb_Chr15g0086801' => 'lal', 'Lalb_Chr16g0383781' => 'lal', 'Lalb_Chr16g0383791' => 'lal', 'Lalb_Chr18g0055441' => 'lal', 'Lalb_Chr18g0059611' => 'lal', 'Lalb_Chr20g0109661' => 'lal', 'Lalb_Chr20g0109831' => 'lal', 'Lalb_Chr20g0121871' => 'lal', 'Lalb_Chr22g0355361' => 'lal', 'Lalb_Chr25g0286371' => 'lal', 'Lj1A1187G43' => 'lonja', 'Lj1A1205T50' => 'lonja', 'Lj1A800G33' => 'lonja', 'Lj1C1187T7' => 'lonja', 'Lj1C843T11' => 'lonja', 'Lj1g0010940' => 'lja', 'Lj2A288T69' => 'lonja', 'Lj3g0024276' => 'lja', 'Lj4A47T76' => 'lonja', 'Lj4g0005805' => 'lja', 'Lj4g0006097' => 'lja', 'Lj4g0008528' => 'lja', 'Lj4g0024907' => 'lja', 'Lj5g0012472' => 'lja', 'Lj5g0018648' => 'lja', 'Lj6C789G1' => 'lonja', 'Lj6g0004000' => 'lja', 'Lj7A292G67' => 'lonja', 'Lj7A292T64' => 'lonja', 'Lj9A400T58' => 'lonja', 'Lsat_1_v5_gn_1_126181' => 'lsa', 'Lsat_1_v5_gn_4_123041' => 'lsa', 'Lsat_1_v5_gn_4_133620' => 'lsa', 'Lsat_1_v5_gn_4_53221' => 'lsa', 'Lsat_1_v5_gn_4_71961' => 'lsa', 'Lsat_1_v5_gn_7_105241' => 'lsa', 'Lsat_1_v5_gn_7_21361' => 'lsa', 'Lsat_1_v5_gn_7_28860' => 'lsa', 'Lsat_1_v5_gn_7_31260' => 'lsa', 'Lsat_1_v5_gn_8_52801' => 'lsa', 'Manes.02G191400' => 'mes', 'Manes.03G110100' => 'mes', 'Manes.04G071100' => 'mes', 'Manes.05G100500' => 'mes', 'Manes.05G164700' => 'mes', 'Manes.15G087000' => 'mes', 'Manes.15G121500' => 'mes', 'Manes.16G028300' => 'mes', 'Manes.17G046100' => 'mes', 'Manes.17G069800' => 'mes', 'Manes.18G100500' => 'mes', 'Mapoly0002s0109' => 'mpo', 'Mapoly0024s0007' => 'mpo', 'Mapoly0089s0032' => 'mpo', 'MBI04_g42241_MAGBIO' => 'mbi', 'MBI05_g11988_MAGBIO' => 'mbi', 'MBI05_g35452_MAGBIO' => 'mbi', 'MBI07_g30179_MAGBIO' => 'mbi', 'MBI07_g35859_MAGBIO' => 'mbi', 'MBI07_g35860_MAGBIO' => 'mbi', 'MBI07_g37166_MAGBIO' => 'mbi', 'MBI08_g18172_MAGBIO' => 'mbi', 'MBI09_g08441_MAGBIO' => 'mbi', 'MBI13_g01676_MAGBIO' => 'mbi', 'MBI14_g42955_MAGBIO' => 'mbi', 'MBI16_g13161_MAGBIO' => 'mbi', 'MBI17_g27204_MAGBIO' => 'mbi', 'MBI19_g21595_MAGBIO' => 'mbi', 'MD00G1148400' => 'mdo', 'MD02G1301200' => 'mdo', 'MD03G1227800' => 'mdo', 'MD05G1041100' => 'mdo', 'MD05G1124800' => 'mdo', 'MD05G1284000' => 'mdo', 'MD05G1338800' => 'mdo', 'MD05G1338900' => 'mdo', 'MD07G1022800' => 'mdo', 'MD10G1047500' => 'mdo', 'MD10G1127500' => 'mdo', 'MD10G1262300' => 'mdo', 'MD10G1293800' => 'mdo', 'MD16G1074300' => 'mdo', 'Medtr1g021670' => 'mtr', 'Medtr1g096320' => 'mtr', 'Medtr2g013690' => 'mtr', 'Medtr2g019450' => 'mtr', 'Medtr2g085170' => 'mtr', 'Medtr4g088785' => 'mtr', 'Medtr8g055930' => 'mtr', 'Medtr8g085850' => 'mtr', 'MELO3C002605.2' => 'cme', 'MELO3C003891.2' => 'cme', 'MELO3C004012.2' => 'cme', 'MELO3C007134.2' => 'cme', 'MELO3C008118.2' => 'cme', 'MELO3C016700.2' => 'cme', 'MELO3C024127.2' => 'cme', 'MELO3C033361.2' => 'cme', 'MELO3C033362.2' => 'cme', 'Migut.C00430' => 'egut', 'Migut.C01246' => 'egut', 'Migut.E00101' => 'egut', 'Migut.H01486' => 'egut', 'Migut.H01939' => 'egut', 'Migut.K00360' => 'egut', 'Migut.M00910' => 'egut', 'Migut.M01139' => 'egut', 'Migut.N02677' => 'egut', 'MSTRG.13252' => 'ama', 'MSTRG.14701' => 'ama', 'MSTRG.1521' => 'ama', 'MSTRG.15884' => 'ama', 'MSTRG.16242' => 'ama', 'MSTRG.22285' => 'ama', 'MSTRG.22444' => 'ama', 'MSTRG.2349' => 'ama', 'MSTRG.26308' => 'ama', 'MSTRG.28296' => 'ama', 'MSTRG.9895' => 'ama', 'Nitab4.5_0000110g0060' => 'nta', 'Nitab4.5_0000420g0130' => 'nta', 'Nitab4.5_0000422g0030' => 'nta', 'Nitab4.5_0000560g0180' => 'nta', 'Nitab4.5_0000703g0100' => 'nta', 'Nitab4.5_0000786g0200' => 'nta', 'Nitab4.5_0001336g0020' => 'nta', 'Nitab4.5_0001796g0030' => 'nta', 'Nitab4.5_0003348g0060' => 'nta', 'Nitab4.5_0003698g0040' => 'nta', 'Nitab4.5_0003942g0090' => 'nta', 'Nitab4.5_0004775g0070' => 'nta', 'Nitab4.5_0004864g0030' => 'nta', 'Nitab4.5_0005615g0020' => 'nta', 'Nitab4.5_0009288g0030' => 'nta', 'Nitab4.5_0009341g0010' => 'nta', 'Nitab4.5_0009535g0010' => 'nta', 'Nn1g03995' => 'nnu', 'Nn1g04100' => 'nnu', 'Nn1g06530' => 'nnu', 'Nn3g16404' => 'nnu', 'Nn3g17212' => 'nnu', 'Nn3g20776' => 'nnu', 'Nn3g21923' => 'nnu', 'Nn5g27737' => 'nnu', 'Nn5g29461' => 'nnu', 'Nn7g38355' => 'nnu', 'Nn8g39873' => 'nnu', 'Oeu000548.2' => 'oeu', 'Oeu004672.1' => 'oeu', 'Oeu015605.2' => 'oeu', 'Oeu016092.1' => 'oeu', 'Oeu017879.3' => 'oeu', 'Oeu024910.1' => 'oeu', 'Oeu028965.1' => 'oeu', 'Oeu031269.1' => 'oeu', 'Oeu031270.1' => 'oeu', 'Oeu032535.1' => 'oeu', 'Oeu034151.1' => 'oeu', 'Oeu034152.1' => 'oeu', 'Oeu034588.2' => 'oeu', 'Oeu050846.1' => 'oeu', 'Oeu050849.2' => 'oeu', 'Oeu051063.2' => 'oeu', 'Oeu052368.1' => 'oeu', 'Oeu052370.1' => 'oeu', 'Os01g0210400' => 'osa', 'Os01g0304300' => 'osa', 'Os01g0749100' => 'osa', 'Os02g0745800' => 'osa', 'Os03g0769050' => 'osa', 'Os05g0531500' => 'osa', 'Os06g0724300' => 'osa', 'Os11g0198100' => 'osa', 'Peaxi162Scf00069g01425' => 'pax', 'Peaxi162Scf00280g00811' => 'pax', 'Peaxi162Scf00310g00615' => 'pax', 'Peaxi162Scf00362g00542' => 'pax', 'Peaxi162Scf00461g00310' => 'pax', 'Peaxi162Scf00530g00118' => 'pax', 'Peaxi162Scf00541g00057' => 'pax', 'Peaxi162Scf00661g00017' => 'pax', 'Peaxi162Scf00926g00027' => 'pax', 'Peaxi162Scf01064g00263' => 'pax', 'Peaxi162Scf01211g00135' => 'pax', 'PGR004G2336' => 'pgr', 'PGR042G0327' => 'pgr', 'PGR042G1957' => 'pgr', 'PGR042G2003' => 'pgr', 'PGR042G3929' => 'pgr', 'PGR083G1137' => 'pgr', 'PGR083G1364' => 'pgr', 'PGSC0003DMG400003381' => 'stu', 'PGSC0003DMG400003417' => 'stu', 'PGSC0003DMG400008981' => 'stu', 'PGSC0003DMG400012417' => 'stu', 'PGSC0003DMG400012823' => 'stu', 'PGSC0003DMG400016885' => 'stu', 'PGSC0003DMG400022812' => 'stu', 'PGSC0003DMG400029726' => 'stu', 'PGSC0003DMG401009243' => 'stu', 'PGSC0003DMG401031505' => 'stu', 'PGSC0003DMG402031505' => 'stu', 'Phvul.001G017600' => 'pvu', 'Phvul.002G193500' => 'pvu', 'Phvul.002G228900' => 'pvu', 'Phvul.002G236800' => 'pvu', 'Phvul.003G049500' => 'pvu', 'Phvul.005G072000' => 'pvu', 'Phvul.006G164800' => 'pvu', 'Phvul.006G185100' => 'pvu', 'Phvul.007G090000' => 'pvu', 'Potri.001G399800' => 'ptr', 'Potri.002G149900' => 'ptr', 'Potri.004G044100' => 'ptr', 'Potri.004G177600' => 'ptr', 'Potri.009G138000' => 'ptr', 'Potri.010G094000' => 'ptr', 'Potri.011G053000' => 'ptr', 'Potri.011G119300' => 'ptr', 'Potri.013G113700' => 'ptr', 'Potri.018G107800' => 'ptr', 'Potri.019G084100' => 'ptr', 'Pp3c14_23720' => 'ppa', 'Pp3c16_6340' => 'ppa', 'Pp3c23_13420' => 'ppa', 'Pp3c24_2740' => 'ppa', 'Pp3c25_860' => 'ppa', 'Pp3c8_21750' => 'ppa', 'Prupe.1G273000' => 'ppe', 'Prupe.1G273700' => 'ppe', 'Prupe.1G274100' => 'ppe', 'Prupe.2G023300' => 'ppe', 'Prupe.4G048000' => 'ppe', 'Prupe.4G080400' => 'ppe', 'Prupe.4G181200' => 'ppe', 'Prupe.8G056900' => 'ppe', 'Prupe.8G168700' => 'ppe', 'Psat1g189080' => 'psa', 'Psat1g204760' => 'psa', 'Psat4g175560' => 'psa', 'Psat4g177720' => 'psa', 'Psat5g244240' => 'psa', 'Psat6g010720' => 'psa', 'Psat6g187200' => 'psa', 'Psat7g072040' => 'psa', 'PSO017G3501' => 'pso', 'PSO063G2148' => 'pso', 'PSO063G5608' => 'pso', 'PSO210G6392' => 'pso', 'PSO541G2319' => 'pso', 'PSO541G2836' => 'pso', 'PSO541G4012' => 'pso', 'PSO541G6253' => 'pso', 'PSO675G0580' => 'pso', 'PSO675G0856' => 'pso', 'PSO675G5635' => 'pso', 'PSO675G9157' => 'pso', 'PSO832G1660' => 'pso', 'PSO832G1969' => 'pso', 'QL02p007186' => 'qlo', 'QL02p033904' => 'qlo', 'QL03p064391' => 'qlo', 'QL05p040593' => 'qlo', 'QL05p058242' => 'qlo', 'QL08p021825' => 'qlo', 'QL11p004981' => 'qlo', 'RcHm_v2.0_Chr1g0318301' => 'rch', 'RcHm_v2.0_Chr4g0418501' => 'rch', 'RcHm_v2.0_Chr4g0439971' => 'rch', 'RcHm_v2.0_Chr5g0008541' => 'rch', 'RcHm_v2.0_Chr5g0014101' => 'rch', 'RcHm_v2.0_Chr5g0014131' => 'rch', 'RcHm_v2.0_Chr5g0033621' => 'rch', 'RcHm_v2.0_Chr6g0272041' => 'rch', 'RcHm_v2.0_Chr6g0278831' => 'rch', 'Rhsim02G0130400' => 'rsi', 'Rhsim02G0171100' => 'rsi', 'Rhsim05G0053000' => 'rsi', 'Rhsim05G0053100' => 'rsi', 'Rhsim06G0096500' => 'rsi', 'Rhsim06G0096600' => 'rsi', 'Rhsim06G0199100' => 'rsi', 'Rhsim12G0062300' => 'rsi', 'Rhsim12G0062800' => 'rsi', 'Sabra02G0118600' => 'sbr', 'Sabra04G0027300' => 'sbr', 'Sabra04G0119500' => 'sbr', 'Sabra08G0112500' => 'sbr', 'Sabra11G0036800' => 'sbr', 'Sabra11G0103800' => 'sbr', 'Sabra13G0096300' => 'sbr', 'Sabra16G0262300' => 'sbr', 'Sabra18G0091700' => 'sbr', 'Sabra19G0095400' => 'sbr', 'SalBow6G3080' => 'sbo', 'SalBow7G1157' => 'sbo', 'SalBow7G2123' => 'sbo', 'SalBow7G2285' => 'sbo', 'SalBow7G3537' => 'sbo', 'SalBow8G2947' => 'sbo', 'SalBow8G4463' => 'sbo', 'SalBow8G5466' => 'sbo', 'Sc01g0001750' => 'sci', 'Sc02g0006640' => 'sci', 'Sc02g0006670' => 'sci', 'Sc04g0008220' => 'sci', 'Sc05g0006190' => 'sci', 'Sc08g0002760' => 'sci', 'Sc17g0006170' => 'sci', 'Sc22g0002050' => 'sci', 'Sc23g0001190' => 'sci', 'Sc24g0000980' => 'sci', 'Sed0006245' => 'sed', 'Sed0007543' => 'sed', 'Sed0009411' => 'sed', 'Sed0010765' => 'sed', 'Sed0012944' => 'sed', 'Sed0014682' => 'sed', 'Sed0016174' => 'sed', 'Sed0016796' => 'sed', 'Sed0020317' => 'sed', 'Sed0021467' => 'sed', 'SEGI_01316' => 'sgi', 'SEGI_03374' => 'sgi', 'SEGI_16265' => 'sgi', 'SEGI_18569' => 'sgi', 'SEGI_20351' => 'sgi', 'SEGI_26395' => 'sgi', 'SEGI_29469' => 'sgi', 'SEGI_34771' => 'sgi', 'SEGI_36769' => 'sgi', 'SEGI_37139' => 'sgi', 'SGA_v2.0_scaffold100G29687' => 'sas', 'SGA_v2.0_scaffold118G32472' => 'sas', 'SGA_v2.0_scaffold14G07051' => 'sas', 'SGA_v2.0_scaffold183G39845' => 'sas', 'SGA_v2.0_scaffold1G00174' => 'sas', 'SGA_v2.0_scaffold22G09714' => 'sas', 'SGA_v2.0_scaffold333G48992' => 'sas', 'SGA_v2.0_scaffold46G17491' => 'sas', 'SGA_v2.0_scaffold49G18294' => 'sas', 'SGA_v2.0_scaffold63G21658' => 'sas', 'SHI01741' => 'shi', 'SHI05771' => 'shi', 'SHI18077' => 'shi', 'SHI20525' => 'shi', 'SHI20527' => 'shi', 'SHI20528' => 'shi', 'SMO172G0185' => 'smo', 'SMO198G0020' => 'smo', 'SMO351G0006' => 'smo', 'SMO356G0118' => 'smo', 'SMO358G0296' => 'smo', 'SMO367G0079' => 'smo', 'SMO367G1277' => 'smo', 'Solyc01g014220.3' => 'sly', 'Solyc01g111770.2' => 'sly', 'Solyc02g078180.3' => 'sly', 'Solyc03g006430.3' => 'sly', 'Solyc03g006456.1' => 'sly', 'Solyc03g079860.2' => 'sly', 'Solyc04g079770.3' => 'sly', 'Solyc05g007430.4' => 'sly', 'Solyc07g063150.3' => 'sly', 'Solyc08g016620.3' => 'sly', 'Solyc09g057590.3' => 'sly', 'Solyc09g057600.1' => 'sly', 'Solyc10g009050.3' => 'sly', 'Solyc11g017420.2' => 'sly', 'Sopen01g053810' => 'spe', 'Sopen02g023040' => 'spe', 'Sopen03g002440' => 'spe', 'Sopen04g033350' => 'spe', 'Sopen05g003310' => 'spe', 'Sopen07g004050' => 'spe', 'Sopen07g031340' => 'spe', 'Sopen08g006990' => 'spe', 'Sopen10g004830' => 'spe', 'Sopen11g009370' => 'spe', 'Sp1g24450' => 'spa', 'Sp1g29670' => 'spa', 'Sp1g39600' => 'spa', 'Sp2g11080' => 'spa', 'Sp2g13970' => 'spa', 'Sp4g16130' => 'spa', 'Sp6g13080' => 'spa', 'Sp7g37270' => 'spa', 'TAR371G0065' => 'tar', 'TAR376G0340' => 'tar', 'TAR376G0435' => 'tar', 'TAR381G0002' => 'tar', 'TAR381G1236' => 'tar', 'TAR624G0055' => 'tar', 'TAR624G0324' => 'tar', 'TAR624G0696' => 'tar', 'TAR624G0906' => 'tar', 'TAR625G0107' => 'tar', 'TAR626G0015' => 'tar', 'TAR626G1356' => 'tar', 'TAR627G0888' => 'tar', 'TAR628G0399' => 'tar', 'TAR628G1327' => 'tar', 'TAR629G2831' => 'tar', 'TAR629G2874' => 'tar', 'TAR633G1432' => 'tar', 'TAR633G2771' => 'tar', 'THA.LOC104803394' => 'tha', 'THA.LOC104805153' => 'tha', 'THA.LOC104806784' => 'tha', 'THA.LOC104810473' => 'tha', 'THA.LOC104813100' => 'tha', 'THA.LOC104814215' => 'tha', 'THA.LOC104815554' => 'tha', 'THA.LOC104820544' => 'tha', 'THA.LOC104824754' => 'tha', 'THA.LOC104827717' => 'tha', 'Thecc.02G031400' => 'tca', 'Thecc.02G055900' => 'tca', 'Thecc.02G350800' => 'tca', 'Thecc.06G150900' => 'tca', 'Thecc.06G186600' => 'tca', 'Thecc.07G089600' => 'tca', 'Thecc.08G020400' => 'tca', 'Thecc.08G182100' => 'tca', 'Thhalv10000873m.g' => 'esa', 'Thhalv10004185m.g' => 'esa', 'Thhalv10006981m.g' => 'esa', 'Thhalv10007204m.g' => 'esa', 'Thhalv10011374m.g' => 'esa', 'Thhalv10013482m.g' => 'esa', 'Thhalv10017801m.g' => 'esa', 'Thhalv10024983m.g' => 'esa', 'TPR.G12072' => 'tpr', 'TPR.G15769' => 'tpr', 'TPR.G16504' => 'tpr', 'TPR.G16506' => 'tpr', 'TPR.G24345' => 'tpr', 'TPR.G26666' => 'tpr', 'TPR.G27320' => 'tpr', 'TPR.G31819' => 'tpr', 'TPR.G38879' => 'tpr', 'TPR.G39015' => 'tpr', 'TPR.G8819' => 'tpr', 'TWI09G0924' => 'twi', 'TWI12G0811' => 'twi', 'TWI12G1294' => 'twi', 'TWI31G0150' => 'twi', 'TWI36G1262' => 'twi', 'TWI38G1287' => 'twi', 'TWI38G1633' => 'twi', 'TWI38G1982' => 'twi', 'TWI39G0116' => 'twi', 'TWI60G1011' => 'twi', 'TWI63G0171' => 'twi', 'TWI73G0839' => 'twi', 'TWI79G1511' => 'twi', 'unitig_0.g915' => 'ugi', 'unitig_0.g916' => 'ugi', 'unitig_21.g20219' => 'ugi', 'unitig_21.g20416' => 'ugi', 'unitig_578.g16132' => 'ugi', 'unitig_578.g16718' => 'ugi', 'unitig_62.g23481' => 'ugi', 'unitig_744.g24535' => 'ugi', 'unitig_749.g13525' => 'ugi', 'vmacro01248' => 'vma', 'vmacro02290' => 'vma', 'vmacro10946' => 'vma', 'vmacro11865' => 'vma', 'vmacro12493' => 'vma', 'vmacro17322' => 'vma', 'vmacro21599' => 'vma', 'vmacro23041' => 'vma', 'VMungo0251G0004' => 'vmu', 'VMungo0251G2639' => 'vmu', 'VMungo0251G2967' => 'vmu', 'VMungo0540G0864' => 'vmu', 'VMungo0540G1569' => 'vmu', 'VMungo0647G0317' => 'vmu', 'VMungo0720G1373' => 'vmu', 'VMungo0720G1508' => 'vmu', 'VMungo1080G0485' => 'vmu', 'VMungo1215G3177' => 'vmu', 'Zm00001eb112600' => 'zma', 'Zm00001eb120220' => 'zma', 'Zm00001eb153240' => 'zma', 'Zm00001eb168880' => 'zma', 'Zm00001eb213920' => 'zma', 'Zm00001eb228280' => 'zma', 'Zm00001eb254580' => 'zma', 'Zm00001eb272180' => 'zma', 'Zm00001eb293190' => 'zma', 'Zm00001eb322930' => 'zma', 'Zm00001eb353360' => 'zma', 'Zm00001eb353390' => 'zma', 'Zm00001eb353430' => 'zma', 'Zm00001eb353440' => 'zma', 'Zm00001eb353780' => 'zma' ), 'gf_id' => 'HOM05D000499', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000499' ), 'data_identifier' => 'HOM05D000499', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000499', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1066', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p29780' => 'bna', 'A02p33180' => 'bna', 'A03p16470' => 'bna', 'A03p66010' => 'bna', 'A04p25970' => 'bna', 'A06p01270' => 'bna', 'A06p46080' => 'bna', 'A07p11400' => 'bna', 'A08p01840' => 'bna', 'A08p08230' => 'bna', 'A08p25740' => 'bna', 'A09p32070' => 'bna', 'A09p37830' => 'bna', 'A09p42840' => 'bna', 'A09p42850' => 'bna', 'Aa31LG10G2060' => 'aar', 'Aa31LG2G7410' => 'aar', 'Aa31LG6G10200' => 'aar', 'Aa31LG6G16680' => 'aar', 'Aa31LG6G8470' => 'aar', 'Aa31LG9G12730' => 'aar', 'Aa31LG9G13680' => 'aar', 'Aa31LG9G14920' => 'aar', 'Aa31LG9G6650' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4977' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5467' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3254' => 'aag', 'Actinidia02578' => 'ach', 'Actinidia07693' => 'ach', 'Actinidia08413' => 'ach', 'Actinidia08414' => 'ach', 'Actinidia15289' => 'ach', 'Actinidia19871' => 'ach', 'Actinidia21475' => 'ach', 'Actinidia22576' => 'ach', 'Actinidia28327' => 'ach', 'Actinidia32491' => 'ach', 'Actinidia39463' => 'ach', 'Actinidia39571' => 'ach', 'Ah.01g013750' => 'amhyb', 'Ah.01g023210' => 'amhyb', 'Ah.04g164850' => 'amhyb', 'Ah.05g178060' => 'amhyb', 'Ah.07g204270' => 'amhyb', 'Ah.07g208480' => 'amhyb', 'Ah.09g237410' => 'amhyb', 'Ah.14g089460' => 'amhyb', 'AL1G41790' => 'aly', 'AL1G49050' => 'aly', 'AL1G53810' => 'aly', 'AL1G61400' => 'aly', 'AL4G18580' => 'aly', 'AL5G12510' => 'aly', 'AL5G12540' => 'aly', 'AL6G43230' => 'aly', 'AL7G10370' => 'aly', 'AL7G19250' => 'aly', 'AL8G12240' => 'aly', 'AL8G18540' => 'aly', 'Aqoxy1G02409' => 'aox', 'Aqoxy2G03993' => 'aox', 'Aqoxy3G03357' => 'aox', 'Aqoxy4G00785' => 'aox', 'Aqoxy5G02598' => 'aox', 'Aqoxy6G00132' => 'aox', 'Aqoxy7G01776' => 'aox', 'Aqoxy7G02316' => 'aox', 'Aqoxy7G03973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.12AFKW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B8730' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27IQR1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3F75VG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3RE0GA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41TCQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.527VTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FIR39' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5W8UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DA38EV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ63HS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H1I32C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HC27T5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4M8AP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7N3CZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9UVDZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LS1NQA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT1D4B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SKC4TM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCFV76' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF9Q1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQWD9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1ZM88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WE07RT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YCK7VH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJE6Q6' => 'arhy', 'AT1G28240' => 'ath', 'AT1G34550' => 'ath', 'AT1G53040' => 'ath', 'AT2G02910' => 'ath', 'AT4G09630' => 'ath', 'AT4G38500' => 'ath', 'AT5G42660' => 'ath', 'AT5G46220' => 'ath', 'ATR0152G026' => 'atr', 'ATR0564G343' => 'atr', 'ATR0706G151' => 'atr', 'ATR0733G207' => 'atr', 'ATR0751G234' => 'atr', 'ATR0807G048' => 'atr', 'ATR1091G084' => 'atr', 'Atru.chr10.1229' => 'acertr', 'Atru.chr10.1230' => 'acertr', 'Atru.chr10.1874' => 'acertr', 'Atru.chr11.1808' => 'acertr', 'Atru.chr13.1795' => 'acertr', 'Atru.chr13.570' => 'acertr', 'Atru.chr2.2608' => 'acertr', 'Atru.chr2.2609' => 'acertr', 'Atru.chr5.3428' => 'acertr', 'Atru.chr8.1171' => 'acertr', 'AUR62004651' => 'cqu', 'AUR62008675' => 'cqu', 'AUR62010014' => 'cqu', 'AUR62013004' => 'cqu', 'AUR62014825' => 'cqu', 'AUR62015015' => 'cqu', 'AUR62015151' => 'cqu', 'AUR62017020' => 'cqu', 'AUR62019422' => 'cqu', 'AUR62023570' => 'cqu', 'AUR62025571' => 'cqu', 'AUR62029098' => 'cqu', 'AUR62033863' => 'cqu', 'AUR62034296' => 'cqu', 'AUR62040075' => 'cqu', 'BcaB02g07334' => 'bca', 'BcaB02g10575' => 'bca', 'BcaB03g12119' => 'bca', 'BcaB03g12120' => 'bca', 'BcaB03g13945' => 'bca', 'BcaB04g17123' => 'bca', 'BcaB04g17867' => 'bca', 'BcaB04g19839' => 'bca', 'BcaB07g30317' => 'bca', 'BcaB07g32432' => 'bca', 'BcaB07g33362' => 'bca', 'BcaB08g36611' => 'bca', 'BcaC01g00028' => 'bca', 'BcaC01g01356' => 'bca', 'BcaC01g02034' => 'bca', 'BcaC01g06051' => 'bca', 'BcaC03g16839' => 'bca', 'BcaC03g17176' => 'bca', 'BcaC05g26829' => 'bca', 'BcaC06g31490' => 'bca', 'BcaC06g35344' => 'bca', 'BcaC06g36570' => 'bca', 'BcaC07g37537' => 'bca', 'BcaC08g43491' => 'bca', 'BcaC08g43773' => 'bca', 'BcaNung00234' => 'bca', 'BcaNung01982' => 'bca', 'BcaNung03707' => 'bca', 'BcaNung06454' => 'bca', 'BolC2t10762H' => 'bol', 'BolC2t11191H' => 'bol', 'BolC3t14322H' => 'bol', 'BolC3t19747H' => 'bol', 'BolC3t21425H' => 'bol', 'BolC4t27800H' => 'bol', 'BolC5t31423H' => 'bol', 'BolC6t35951H' => 'bol', 'BolC6t36282H' => 'bol', 'BolC7t40678H' => 'bol', 'BolC7t40679H' => 'bol', 'BolC7t42222H' => 'bol', 'BolC7t43492H' => 'bol', 'BolC7t46785H' => 'bol', 'BolC8t47853H' => 'bol', 'BolC9t56805H' => 'bol', 'BraA02t08000Z' => 'bra', 'BraA02t08341Z' => 'bra', 'BraA03t10936Z' => 'bra', 'BraA03t15657Z' => 'bra', 'BraA04t18100Z' => 'bra', 'BraA05t20523Z' => 'bra', 'BraA06t23353Z' => 'bra', 'BraA06t27473Z' => 'bra', 'BraA06t27769Z' => 'bra', 'BraA07t28928Z' => 'bra', 'BraA08t32236Z' => 'bra', 'BraA08t32841Z' => 'bra', 'BraA08t34524Z' => 'bra', 'BraA09t38742Z' => 'bra', 'BraA09t39295Z' => 'bra', 'C02p47180' => 'bna', 'C02p50990' => 'bna', 'C03p19360' => 'bna', 'C03p74950' => 'bna', 'C03p91000' => 'bna', 'C04p63260' => 'bna', 'C05p27050' => 'bna', 'C06p08750' => 'bna', 'C06p11490' => 'bna', 'C07p02820' => 'bna', 'C07p17180' => 'bna', 'C07p29440' => 'bna', 'C07p63730' => 'bna', 'C09p39260' => 'bna', 'CAN.G1164.34' => 'can', 'CAN.G1164.39' => 'can', 'CAN.G1530.3' => 'can', 'CAN.G162.61' => 'can', 'CAN.G176.6' => 'can', 'CAN.G289.49' => 'can', 'CAN.G370.21' => 'can', 'CAN.G370.22' => 'can', 'CAN.G371.117' => 'can', 'CAN.G58.37' => 'can', 'CAN.G588.98' => 'can', 'CANSAT21G2266' => 'cansat', 'CANSAT25G2799' => 'cansat', 'CANSAT35G0862' => 'cansat', 'CANSAT35G1704' => 'cansat', 'CANSAT35G1760' => 'cansat', 'CANSAT56G3971' => 'cansat', 'CANSAT56G4116' => 'cansat', 'CANSAT80G1259' => 'cansat', 'CARHR027730' => 'chi', 'CARHR033880' => 'chi', 'CARHR043270' => 'chi', 'CARHR145330' => 'chi', 'CARHR145340' => 'chi', 'CARHR175570' => 'chi', 'CARHR181570' => 'chi', 'CARHR258470' => 'chi', 'CARHR260490' => 'chi', 'CARHR294220' => 'chi', 'Carub.0001s2668' => 'cru', 'Carub.0001s3257' => 'cru', 'Carub.0001s4220' => 'cru', 'Carub.0005s0179' => 'cru', 'Carub.0006s2807' => 'cru', 'Carub.0007s0039' => 'cru', 'Carub.0008s0169' => 'cru', 'Carub.0008s0636' => 'cru', 'Ca_00338_v3' => 'car', 'Ca_00542_v3' => 'car', 'Ca_01844_v3' => 'car', 'Ca_10611_v3' => 'car', 'Ca_13326_v3' => 'car', 'Ca_17944_v3' => 'car', 'Ca_18546_v3' => 'car', 'Ca_24219_v3' => 'car', 'Ca_29972_v3' => 'car', 'CBR_g3681' => 'cbr', 'CBR_g40021' => 'cbr', 'Cc01_g08140' => 'ccan', 'Cc02_g13410' => 'ccan', 'Cc02_g37480' => 'ccan', 'Cc05_g12030' => 'ccan', 'Cc09_g03370' => 'ccan', 'Cc09_g10300' => 'ccan', 'Cc10_g03530' => 'ccan', 'Cc10_g11380' => 'ccan', 'CDE01G0176' => 'cde', 'CDE02G0675' => 'cde', 'CDE02G0942' => 'cde', 'CDE02G1153' => 'cde', 'CDE02G4177' => 'cde', 'CDE04G2117' => 'cde', 'CDE04G2736' => 'cde', 'CDE08G1161' => 'cde', 'CDE09G1238' => 'cde', 'Cfa000467' => 'cfa', 'Cfa000947' => 'cfa', 'Cfa004969' => 'cfa', 'Cfa005284' => 'cfa', 'Cfa008993' => 'cfa', 'Cfa018187' => 'cfa', 'Cfa018454' => 'cfa', 'Cfa020585' => 'cfa', 'Ciclev10000424m.g' => 'ccl', 'Ciclev10003605m.g' => 'ccl', 'Ciclev10007828m.g' => 'ccl', 'Ciclev10014620m.g' => 'ccl', 'Ciclev10015169m.g' => 'ccl', 'Ciclev10018291m.g' => 'ccl', 'Ciclev10028256m.g' => 'ccl', 'Ciclev10033822m.g' => 'ccl', 'CiPaw.05G060300' => 'cil', 'CiPaw.05G085000' => 'cil', 'CiPaw.06G083700' => 'cil', 'CiPaw.06G120300' => 'cil', 'CiPaw.09G060500' => 'cil', 'CiPaw.09G123800' => 'cil', 'CiPaw.11G169700' => 'cil', 'CiPaw.12G118300' => 'cil', 'CiPaw.15G071000' => 'cil', 'CiPaw.15G081900' => 'cil', 'ClCG01G024610' => 'cla', 'ClCG03G006070' => 'cla', 'ClCG05G019250' => 'cla', 'ClCG09G009500' => 'cla', 'ClCG11G008200' => 'cla', 'ClCG11G018080' => 'cla', 'COL.COLO4_17373' => 'col', 'COL.COLO4_22994' => 'col', 'COL.COLO4_26389' => 'col', 'COL.COLO4_27170' => 'col', 'COL.COLO4_31074' => 'col', 'COL.COLO4_31465' => 'col', 'COL.COLO4_36438' => 'col', 'COL.COLO4_36439' => 'col', 'Cpa.g.c38781' => 'cpa', 'Cpa.g.sc128.12' => 'cpa', 'Cpa.g.sc166.7' => 'cpa', 'Cpa.g.sc166.8' => 'cpa', 'Cpa.g.sc20.111' => 'cpa', 'Cpa.g.sc27.31' => 'cpa', 'Cpa.g.sc64.36' => 'cpa', 'Cpa.g.sc64.37' => 'cpa', 'Cpa.g.sc66.49' => 'cpa', 'Cpa.g.sc80.64' => 'cpa', 'CsaV3_1G012320' => 'csa', 'CsaV3_2G008480' => 'csa', 'CsaV3_2G033450' => 'csa', 'CsaV3_3G044830' => 'csa', 'CsaV3_4G033710' => 'csa', 'CsaV3_6G051730' => 'csa', 'CsaV3_7G025350' => 'csa', 'CSS0001067' => 'camsi', 'CSS0005996' => 'camsi', 'CSS0006590' => 'camsi', 'CSS0009673' => 'camsi', 'CSS0010201' => 'camsi', 'CSS0010549' => 'camsi', 'CSS0011364' => 'camsi', 'CSS0014473' => 'camsi', 'CSS0014961' => 'camsi', 'CSS0020191' => 'camsi', 'CSS0021165' => 'camsi', 'CSS0022306' => 'camsi', 'CSS0030591' => 'camsi', 'CSS0030696' => 'camsi', 'CSS0032653' => 'camsi', 'CSS0037487' => 'camsi', 'CSS0041102' => 'camsi', 'CSS0041261' => 'camsi', 'CSS0046246' => 'camsi', 'CSS0049256' => 'camsi', 'DCAR_004075' => 'dca', 'DCAR_011538' => 'dca', 'DCAR_019553' => 'dca', 'DCAR_020952' => 'dca', 'DCAR_021739' => 'dca', 'DCAR_027407' => 'dca', 'DCAR_027913' => 'dca', 'DCAR_028066' => 'dca', 'Dinv05899' => 'din', 'Dinv07563' => 'din', 'Dinv08010' => 'din', 'Dinv14125' => 'din', 'Dinv20172' => 'din', 'Dinv30743' => 'din', 'Dinv31229' => 'din', 'Dinv34162' => 'din', 'Dinv36028' => 'din', 'Dinv39368' => 'din', 'Dinv40565' => 'din', 'Dinv41706' => 'din', 'Duzib052G0089' => 'dzi', 'Duzib116G0641' => 'dzi', 'Duzib132G0069' => 'dzi', 'Duzib132G1219' => 'dzi', 'Duzib147G0278' => 'dzi', 'Duzib160G0480' => 'dzi', 'Duzib170G0661' => 'dzi', 'Duzib177G0591' => 'dzi', 'Duzib187G1353' => 'dzi', 'Duzib192G0858' => 'dzi', 'Duzib192G0883' => 'dzi', 'Duzib213G0506' => 'dzi', 'Duzib235G0289' => 'dzi', 'Duzib251G0422' => 'dzi', 'ECA232G3898' => 'eca', 'ECA233G5950' => 'eca', 'ECA234G1699' => 'eca', 'ECA234G2421' => 'eca', 'ECA236G0426' => 'eca', 'ECA236G4331' => 'eca', 'ECA248G2573' => 'eca', 'EL10Ac1g00077' => 'bvu', 'EL10Ac1g01746' => 'bvu', 'EL10Ac2g03464' => 'bvu', 'EL10Ac4g08176' => 'bvu', 'EL10Ac7g17521' => 'bvu', 'EL10Ac8g20386' => 'bvu', 'EL10Ac9g21343' => 'bvu', 'EL10Ac9g22688' => 'bvu', 'Eucgr.B03434' => 'egr', 'Eucgr.D00618' => 'egr', 'Eucgr.E02395' => 'egr', 'Eucgr.F01129' => 'egr', 'Eucgr.F02622' => 'egr', 'Eucgr.F04207' => 'egr', 'FAN01G0570' => 'fan', 'FAN03G3351' => 'fan', 'FAN06G3702' => 'fan', 'FAN07G2149' => 'fan', 'FAN10G3758' => 'fan', 'FAN11G1170' => 'fan', 'FAN11G2050' => 'fan', 'FAN11G2724' => 'fan', 'FAN12G1700' => 'fan', 'FAN12G2028' => 'fan', 'FAN15G1160' => 'fan', 'FAN15G3063' => 'fan', 'FAN16G2540' => 'fan', 'FAN16G3077' => 'fan', 'FAN16G3624' => 'fan', 'FAN17G0221' => 'fan', 'FAN20G2492' => 'fan', 'FAN20G2905' => 'fan', 'FAN21G0548' => 'fan', 'FAN21G1300' => 'fan', 'FAN22G0077' => 'fan', 'FAN22G1315' => 'fan', 'FAN24G1280' => 'fan', 'FAN24G1445' => 'fan', 'FAN24G3527' => 'fan', 'FAN25G0464' => 'fan', 'FAN25G2885' => 'fan', 'FAN25G3270' => 'fan', 'FAN27G1101' => 'fan', 'FAN27G2846' => 'fan', 'FAN27G3524' => 'fan', 'FvH4_2g11770' => 'fve', 'FvH4_2g15630' => 'fve', 'FvH4_3g05570' => 'fve', 'FvH4_3g09110' => 'fve', 'FvH4_3g19940' => 'fve', 'FvH4_4g04821' => 'fve', 'FvH4_4g31480' => 'fve', 'FvH4_7g01740' => 'fve', 'Glyma.05G130400' => 'gma', 'Glyma.05G156400' => 'gma', 'Glyma.07G197000' => 'gma', 'Glyma.08G085151' => 'gma', 'Glyma.08G114500' => 'gma', 'Glyma.08G300400' => 'gma', 'Glyma.10G215800' => 'gma', 'Glyma.12G224400' => 'gma', 'Glyma.13G179300' => 'gma', 'Glyma.13G218151' => 'gma', 'Glyma.13G238800' => 'gma', 'Glyma.13G276900' => 'gma', 'Glyma.14G078200' => 'gma', 'Glyma.15G074500' => 'gma', 'Glyma.15G094100' => 'gma', 'Glyma.17G247200' => 'gma', 'Glyma.18G120100' => 'gma', 'Glyma.20G176000' => 'gma', 'Gohir.A01G063600' => 'ghi', 'Gohir.A01G170301' => 'ghi', 'Gohir.A02G060500' => 'ghi', 'Gohir.A05G133850' => 'ghi', 'Gohir.A05G161400' => 'ghi', 'Gohir.A06G012900' => 'ghi', 'Gohir.A06G035901' => 'ghi', 'Gohir.A06G127100' => 'ghi', 'Gohir.A06G210500' => 'ghi', 'Gohir.A08G008650' => 'ghi', 'Gohir.A09G072700' => 'ghi', 'Gohir.A09G088301' => 'ghi', 'Gohir.A10G040600' => 'ghi', 'Gohir.A12G036300' => 'ghi', 'Gohir.A12G143350' => 'ghi', 'Gohir.A12G165500' => 'ghi', 'Gohir.A13G145700' => 'ghi', 'Gohir.D01G050000' => 'ghi', 'Gohir.D01G051366' => 'ghi', 'Gohir.D01G161350' => 'ghi', 'Gohir.D02G065900' => 'ghi', 'Gohir.D05G164200' => 'ghi', 'Gohir.D05G355500' => 'ghi', 'Gohir.D06G010400' => 'ghi', 'Gohir.D06G111250' => 'ghi', 'Gohir.D06G132000' => 'ghi', 'Gohir.D06G210500' => 'ghi', 'Gohir.D07G165675' => 'ghi', 'Gohir.D08G062240' => 'ghi', 'Gohir.D08G086101' => 'ghi', 'Gohir.D08G138060' => 'ghi', 'Gohir.D09G072300' => 'ghi', 'Gohir.D10G041400' => 'ghi', 'Gohir.D11G191020' => 'ghi', 'Gohir.D11G212066' => 'ghi', 'Gohir.D12G036300' => 'ghi', 'Gohir.D12G168600' => 'ghi', 'Gohir.D13G150600' => 'ghi', 'Gorai.001G057300' => 'gra', 'Gorai.002G069900' => 'gra', 'Gorai.002G200000' => 'gra', 'Gorai.003G067600' => 'gra', 'Gorai.005G074800' => 'gra', 'Gorai.006G087300' => 'gra', 'Gorai.008G037500' => 'gra', 'Gorai.008G181400' => 'gra', 'Gorai.009G169400' => 'gra', 'Gorai.009G387900' => 'gra', 'Gorai.010G013300' => 'gra', 'Gorai.010G153800' => 'gra', 'Gorai.010G255800' => 'gra', 'Gorai.011G043700' => 'gra', 'Gorai.011G198900' => 'gra', 'Gorai.013G168400' => 'gra', 'GSVIVG01005212001' => 'vvi', 'GSVIVG01006163001' => 'vvi', 'GSVIVG01009625001' => 'vvi', 'GSVIVG01014338001' => 'vvi', 'GSVIVG01020005001' => 'vvi', 'GSVIVG01021450001' => 'vvi', 'GSVIVG01023975001' => 'vvi', 'GSVIVG01034490001' => 'vvi', 'HanXRQChr04g0112071' => 'han', 'HanXRQChr05g0131151' => 'han', 'HanXRQChr09g0262371' => 'han', 'HanXRQChr09g0268401' => 'han', 'HanXRQChr10g0279241' => 'han', 'HanXRQChr10g0297961' => 'han', 'HanXRQChr11g0326231' => 'han', 'HanXRQChr11g0328471' => 'han', 'HanXRQChr16g0507941' => 'han', 'HanXRQChr17g0560211' => 'han', 'Haze_02108' => 'cav', 'Haze_02428' => 'cav', 'Haze_05593' => 'cav', 'Haze_06448' => 'cav', 'Haze_09427' => 'cav', 'Haze_12022' => 'cav', 'Haze_17612' => 'cav', 'Haze_17928' => 'cav', 'Hma1.2p1_0032F.1_g019250' => 'hma', 'Hma1.2p1_0163F.1_g072690' => 'hma', 'Hma1.2p1_0265F.1_g106710' => 'hma', 'Hma1.2p1_0286F.1_g113970' => 'hma', 'Hma1.2p1_0363F.1_g136640' => 'hma', 'Hma1.2p1_0584F.1_g183470' => 'hma', 'Hma1.2p1_0885F.1_g232570' => 'hma', 'HPP92_006022' => 'vpl', 'HPP92_007320' => 'vpl', 'HPP92_011521' => 'vpl', 'HPP92_019387' => 'vpl', 'HPP92_024038' => 'vpl', 'Hund05891' => 'sun', 'Hund06450' => 'sun', 'Hund12053' => 'sun', 'Hund16800' => 'sun', 'Hund21222' => 'sun', 'Hund22896' => 'sun', 'Hund23746' => 'sun', 'Hund27083' => 'sun', 'Lalb_Chr02g0141831' => 'lal', 'Lalb_Chr02g0141841' => 'lal', 'Lalb_Chr05g0220411' => 'lal', 'Lalb_Chr06g0162081' => 'lal', 'Lalb_Chr09g0327651' => 'lal', 'Lalb_Chr13g0295051' => 'lal', 'Lalb_Chr15g0086801' => 'lal', 'Lalb_Chr16g0383781' => 'lal', 'Lalb_Chr16g0383791' => 'lal', 'Lalb_Chr18g0055441' => 'lal', 'Lalb_Chr18g0059611' => 'lal', 'Lalb_Chr20g0109661' => 'lal', 'Lalb_Chr20g0109831' => 'lal', 'Lalb_Chr20g0121871' => 'lal', 'Lalb_Chr22g0355361' => 'lal', 'Lalb_Chr25g0286371' => 'lal', 'Lj1A1187G43' => 'lonja', 'Lj1A1205T50' => 'lonja', 'Lj1A800G33' => 'lonja', 'Lj1C1187T7' => 'lonja', 'Lj1C843T11' => 'lonja', 'Lj1g0010940' => 'lja', 'Lj2A288T69' => 'lonja', 'Lj3g0024276' => 'lja', 'Lj4A47T76' => 'lonja', 'Lj4g0005805' => 'lja', 'Lj4g0006097' => 'lja', 'Lj4g0008528' => 'lja', 'Lj4g0024907' => 'lja', 'Lj5g0012472' => 'lja', 'Lj5g0018648' => 'lja', 'Lj6C789G1' => 'lonja', 'Lj6g0004000' => 'lja', 'Lj7A292G67' => 'lonja', 'Lj7A292T64' => 'lonja', 'Lj9A400T58' => 'lonja', 'Lsat_1_v5_gn_1_126181' => 'lsa', 'Lsat_1_v5_gn_4_123041' => 'lsa', 'Lsat_1_v5_gn_4_133620' => 'lsa', 'Lsat_1_v5_gn_4_53221' => 'lsa', 'Lsat_1_v5_gn_4_71961' => 'lsa', 'Lsat_1_v5_gn_7_105241' => 'lsa', 'Lsat_1_v5_gn_7_21361' => 'lsa', 'Lsat_1_v5_gn_7_28860' => 'lsa', 'Lsat_1_v5_gn_7_31260' => 'lsa', 'Lsat_1_v5_gn_8_52801' => 'lsa', 'Manes.02G191400' => 'mes', 'Manes.03G110100' => 'mes', 'Manes.04G071100' => 'mes', 'Manes.05G100500' => 'mes', 'Manes.05G164700' => 'mes', 'Manes.15G087000' => 'mes', 'Manes.15G121500' => 'mes', 'Manes.16G028300' => 'mes', 'Manes.17G046100' => 'mes', 'Manes.17G069800' => 'mes', 'Manes.18G100500' => 'mes', 'Mapoly0002s0109' => 'mpo', 'Mapoly0024s0007' => 'mpo', 'Mapoly0089s0032' => 'mpo', 'MBI04_g42241_MAGBIO' => 'mbi', 'MBI05_g11988_MAGBIO' => 'mbi', 'MBI05_g35452_MAGBIO' => 'mbi', 'MBI07_g30179_MAGBIO' => 'mbi', 'MBI07_g35859_MAGBIO' => 'mbi', 'MBI07_g35860_MAGBIO' => 'mbi', 'MBI07_g37166_MAGBIO' => 'mbi', 'MBI08_g18172_MAGBIO' => 'mbi', 'MBI09_g08441_MAGBIO' => 'mbi', 'MBI13_g01676_MAGBIO' => 'mbi', 'MBI14_g42955_MAGBIO' => 'mbi', 'MBI16_g13161_MAGBIO' => 'mbi', 'MBI17_g27204_MAGBIO' => 'mbi', 'MBI19_g21595_MAGBIO' => 'mbi', 'MD00G1148400' => 'mdo', 'MD02G1301200' => 'mdo', 'MD03G1227800' => 'mdo', 'MD05G1041100' => 'mdo', 'MD05G1124800' => 'mdo', 'MD05G1284000' => 'mdo', 'MD05G1338800' => 'mdo', 'MD05G1338900' => 'mdo', 'MD07G1022800' => 'mdo', 'MD10G1047500' => 'mdo', 'MD10G1127500' => 'mdo', 'MD10G1262300' => 'mdo', 'MD10G1293800' => 'mdo', 'MD16G1074300' => 'mdo', 'Medtr1g021670' => 'mtr', 'Medtr1g096320' => 'mtr', 'Medtr2g013690' => 'mtr', 'Medtr2g019450' => 'mtr', 'Medtr2g085170' => 'mtr', 'Medtr4g088785' => 'mtr', 'Medtr8g055930' => 'mtr', 'Medtr8g085850' => 'mtr', 'MELO3C002605.2' => 'cme', 'MELO3C003891.2' => 'cme', 'MELO3C004012.2' => 'cme', 'MELO3C007134.2' => 'cme', 'MELO3C008118.2' => 'cme', 'MELO3C016700.2' => 'cme', 'MELO3C024127.2' => 'cme', 'MELO3C033361.2' => 'cme', 'MELO3C033362.2' => 'cme', 'Migut.C00430' => 'egut', 'Migut.C01246' => 'egut', 'Migut.E00101' => 'egut', 'Migut.H01486' => 'egut', 'Migut.H01939' => 'egut', 'Migut.K00360' => 'egut', 'Migut.M00910' => 'egut', 'Migut.M01139' => 'egut', 'Migut.N02677' => 'egut', 'MSTRG.13252' => 'ama', 'MSTRG.14701' => 'ama', 'MSTRG.1521' => 'ama', 'MSTRG.15884' => 'ama', 'MSTRG.16242' => 'ama', 'MSTRG.22285' => 'ama', 'MSTRG.22444' => 'ama', 'MSTRG.2349' => 'ama', 'MSTRG.26308' => 'ama', 'MSTRG.28296' => 'ama', 'MSTRG.9895' => 'ama', 'Nitab4.5_0000110g0060' => 'nta', 'Nitab4.5_0000420g0130' => 'nta', 'Nitab4.5_0000422g0030' => 'nta', 'Nitab4.5_0000560g0180' => 'nta', 'Nitab4.5_0000703g0100' => 'nta', 'Nitab4.5_0000786g0200' => 'nta', 'Nitab4.5_0001336g0020' => 'nta', 'Nitab4.5_0001796g0030' => 'nta', 'Nitab4.5_0003348g0060' => 'nta', 'Nitab4.5_0003698g0040' => 'nta', 'Nitab4.5_0003942g0090' => 'nta', 'Nitab4.5_0004775g0070' => 'nta', 'Nitab4.5_0004864g0030' => 'nta', 'Nitab4.5_0005615g0020' => 'nta', 'Nitab4.5_0009288g0030' => 'nta', 'Nitab4.5_0009341g0010' => 'nta', 'Nitab4.5_0009535g0010' => 'nta', 'Nn1g03995' => 'nnu', 'Nn1g04100' => 'nnu', 'Nn1g06530' => 'nnu', 'Nn3g16404' => 'nnu', 'Nn3g17212' => 'nnu', 'Nn3g20776' => 'nnu', 'Nn3g21923' => 'nnu', 'Nn5g27737' => 'nnu', 'Nn5g29461' => 'nnu', 'Nn7g38355' => 'nnu', 'Nn8g39873' => 'nnu', 'Oeu000548.2' => 'oeu', 'Oeu004672.1' => 'oeu', 'Oeu015605.2' => 'oeu', 'Oeu016092.1' => 'oeu', 'Oeu017879.3' => 'oeu', 'Oeu024910.1' => 'oeu', 'Oeu028965.1' => 'oeu', 'Oeu031269.1' => 'oeu', 'Oeu031270.1' => 'oeu', 'Oeu032535.1' => 'oeu', 'Oeu034151.1' => 'oeu', 'Oeu034152.1' => 'oeu', 'Oeu034588.2' => 'oeu', 'Oeu050846.1' => 'oeu', 'Oeu050849.2' => 'oeu', 'Oeu051063.2' => 'oeu', 'Oeu052368.1' => 'oeu', 'Oeu052370.1' => 'oeu', 'Os01g0210400' => 'osa', 'Os01g0304300' => 'osa', 'Os01g0749100' => 'osa', 'Os02g0745800' => 'osa', 'Os03g0769050' => 'osa', 'Os05g0531500' => 'osa', 'Os06g0724300' => 'osa', 'Os11g0198100' => 'osa', 'Peaxi162Scf00069g01425' => 'pax', 'Peaxi162Scf00280g00811' => 'pax', 'Peaxi162Scf00310g00615' => 'pax', 'Peaxi162Scf00362g00542' => 'pax', 'Peaxi162Scf00461g00310' => 'pax', 'Peaxi162Scf00530g00118' => 'pax', 'Peaxi162Scf00541g00057' => 'pax', 'Peaxi162Scf00661g00017' => 'pax', 'Peaxi162Scf00926g00027' => 'pax', 'Peaxi162Scf01064g00263' => 'pax', 'Peaxi162Scf01211g00135' => 'pax', 'PGR004G2336' => 'pgr', 'PGR042G0327' => 'pgr', 'PGR042G1957' => 'pgr', 'PGR042G2003' => 'pgr', 'PGR042G3929' => 'pgr', 'PGR083G1137' => 'pgr', 'PGR083G1364' => 'pgr', 'PGSC0003DMG400003381' => 'stu', 'PGSC0003DMG400003417' => 'stu', 'PGSC0003DMG400008981' => 'stu', 'PGSC0003DMG400012417' => 'stu', 'PGSC0003DMG400012823' => 'stu', 'PGSC0003DMG400016885' => 'stu', 'PGSC0003DMG400022812' => 'stu', 'PGSC0003DMG400029726' => 'stu', 'PGSC0003DMG401009243' => 'stu', 'PGSC0003DMG401031505' => 'stu', 'PGSC0003DMG402031505' => 'stu', 'Phvul.001G017600' => 'pvu', 'Phvul.002G193500' => 'pvu', 'Phvul.002G228900' => 'pvu', 'Phvul.002G236800' => 'pvu', 'Phvul.003G049500' => 'pvu', 'Phvul.005G072000' => 'pvu', 'Phvul.006G164800' => 'pvu', 'Phvul.006G185100' => 'pvu', 'Phvul.007G090000' => 'pvu', 'Potri.001G399800' => 'ptr', 'Potri.002G149900' => 'ptr', 'Potri.004G044100' => 'ptr', 'Potri.004G177600' => 'ptr', 'Potri.009G138000' => 'ptr', 'Potri.010G094000' => 'ptr', 'Potri.011G053000' => 'ptr', 'Potri.011G119300' => 'ptr', 'Potri.013G113700' => 'ptr', 'Potri.018G107800' => 'ptr', 'Potri.019G084100' => 'ptr', 'Pp3c14_23720' => 'ppa', 'Pp3c16_6340' => 'ppa', 'Pp3c23_13420' => 'ppa', 'Pp3c24_2740' => 'ppa', 'Pp3c25_860' => 'ppa', 'Pp3c8_21750' => 'ppa', 'Prupe.1G273000' => 'ppe', 'Prupe.1G273700' => 'ppe', 'Prupe.1G274100' => 'ppe', 'Prupe.2G023300' => 'ppe', 'Prupe.4G048000' => 'ppe', 'Prupe.4G080400' => 'ppe', 'Prupe.4G181200' => 'ppe', 'Prupe.8G056900' => 'ppe', 'Prupe.8G168700' => 'ppe', 'Psat1g189080' => 'psa', 'Psat1g204760' => 'psa', 'Psat4g175560' => 'psa', 'Psat4g177720' => 'psa', 'Psat5g244240' => 'psa', 'Psat6g010720' => 'psa', 'Psat6g187200' => 'psa', 'Psat7g072040' => 'psa', 'PSO017G3501' => 'pso', 'PSO063G2148' => 'pso', 'PSO063G5608' => 'pso', 'PSO210G6392' => 'pso', 'PSO541G2319' => 'pso', 'PSO541G2836' => 'pso', 'PSO541G4012' => 'pso', 'PSO541G6253' => 'pso', 'PSO675G0580' => 'pso', 'PSO675G0856' => 'pso', 'PSO675G5635' => 'pso', 'PSO675G9157' => 'pso', 'PSO832G1660' => 'pso', 'PSO832G1969' => 'pso', 'QL02p007186' => 'qlo', 'QL02p033904' => 'qlo', 'QL03p064391' => 'qlo', 'QL05p040593' => 'qlo', 'QL05p058242' => 'qlo', 'QL08p021825' => 'qlo', 'QL11p004981' => 'qlo', 'RcHm_v2.0_Chr1g0318301' => 'rch', 'RcHm_v2.0_Chr4g0418501' => 'rch', 'RcHm_v2.0_Chr4g0439971' => 'rch', 'RcHm_v2.0_Chr5g0008541' => 'rch', 'RcHm_v2.0_Chr5g0014101' => 'rch', 'RcHm_v2.0_Chr5g0014131' => 'rch', 'RcHm_v2.0_Chr5g0033621' => 'rch', 'RcHm_v2.0_Chr6g0272041' => 'rch', 'RcHm_v2.0_Chr6g0278831' => 'rch', 'Rhsim02G0130400' => 'rsi', 'Rhsim02G0171100' => 'rsi', 'Rhsim05G0053000' => 'rsi', 'Rhsim05G0053100' => 'rsi', 'Rhsim06G0096500' => 'rsi', 'Rhsim06G0096600' => 'rsi', 'Rhsim06G0199100' => 'rsi', 'Rhsim12G0062300' => 'rsi', 'Rhsim12G0062800' => 'rsi', 'Sabra02G0118600' => 'sbr', 'Sabra04G0027300' => 'sbr', 'Sabra04G0119500' => 'sbr', 'Sabra08G0112500' => 'sbr', 'Sabra11G0036800' => 'sbr', 'Sabra11G0103800' => 'sbr', 'Sabra13G0096300' => 'sbr', 'Sabra16G0262300' => 'sbr', 'Sabra18G0091700' => 'sbr', 'Sabra19G0095400' => 'sbr', 'SalBow6G3080' => 'sbo', 'SalBow7G1157' => 'sbo', 'SalBow7G2123' => 'sbo', 'SalBow7G2285' => 'sbo', 'SalBow7G3537' => 'sbo', 'SalBow8G2947' => 'sbo', 'SalBow8G4463' => 'sbo', 'SalBow8G5466' => 'sbo', 'Sc01g0001750' => 'sci', 'Sc02g0006640' => 'sci', 'Sc02g0006670' => 'sci', 'Sc04g0008220' => 'sci', 'Sc05g0006190' => 'sci', 'Sc08g0002760' => 'sci', 'Sc17g0006170' => 'sci', 'Sc22g0002050' => 'sci', 'Sc23g0001190' => 'sci', 'Sc24g0000980' => 'sci', 'Sed0006245' => 'sed', 'Sed0007543' => 'sed', 'Sed0009411' => 'sed', 'Sed0010765' => 'sed', 'Sed0012944' => 'sed', 'Sed0014682' => 'sed', 'Sed0016174' => 'sed', 'Sed0016796' => 'sed', 'Sed0020317' => 'sed', 'Sed0021467' => 'sed', 'SEGI_01316' => 'sgi', 'SEGI_03374' => 'sgi', 'SEGI_16265' => 'sgi', 'SEGI_18569' => 'sgi', 'SEGI_20351' => 'sgi', 'SEGI_26395' => 'sgi', 'SEGI_29469' => 'sgi', 'SEGI_34771' => 'sgi', 'SEGI_36769' => 'sgi', 'SEGI_37139' => 'sgi', 'SGA_v2.0_scaffold100G29687' => 'sas', 'SGA_v2.0_scaffold118G32472' => 'sas', 'SGA_v2.0_scaffold14G07051' => 'sas', 'SGA_v2.0_scaffold183G39845' => 'sas', 'SGA_v2.0_scaffold1G00174' => 'sas', 'SGA_v2.0_scaffold22G09714' => 'sas', 'SGA_v2.0_scaffold333G48992' => 'sas', 'SGA_v2.0_scaffold46G17491' => 'sas', 'SGA_v2.0_scaffold49G18294' => 'sas', 'SGA_v2.0_scaffold63G21658' => 'sas', 'SHI01741' => 'shi', 'SHI05771' => 'shi', 'SHI18077' => 'shi', 'SHI20525' => 'shi', 'SHI20527' => 'shi', 'SHI20528' => 'shi', 'SMO172G0185' => 'smo', 'SMO198G0020' => 'smo', 'SMO351G0006' => 'smo', 'SMO356G0118' => 'smo', 'SMO358G0296' => 'smo', 'SMO367G0079' => 'smo', 'SMO367G1277' => 'smo', 'Solyc01g014220.3' => 'sly', 'Solyc01g111770.2' => 'sly', 'Solyc02g078180.3' => 'sly', 'Solyc03g006430.3' => 'sly', 'Solyc03g006456.1' => 'sly', 'Solyc03g079860.2' => 'sly', 'Solyc04g079770.3' => 'sly', 'Solyc05g007430.4' => 'sly', 'Solyc07g063150.3' => 'sly', 'Solyc08g016620.3' => 'sly', 'Solyc09g057590.3' => 'sly', 'Solyc09g057600.1' => 'sly', 'Solyc10g009050.3' => 'sly', 'Solyc11g017420.2' => 'sly', 'Sopen01g053810' => 'spe', 'Sopen02g023040' => 'spe', 'Sopen03g002440' => 'spe', 'Sopen04g033350' => 'spe', 'Sopen05g003310' => 'spe', 'Sopen07g004050' => 'spe', 'Sopen07g031340' => 'spe', 'Sopen08g006990' => 'spe', 'Sopen10g004830' => 'spe', 'Sopen11g009370' => 'spe', 'Sp1g24450' => 'spa', 'Sp1g29670' => 'spa', 'Sp1g39600' => 'spa', 'Sp2g11080' => 'spa', 'Sp2g13970' => 'spa', 'Sp4g16130' => 'spa', 'Sp6g13080' => 'spa', 'Sp7g37270' => 'spa', 'TAR371G0065' => 'tar', 'TAR376G0340' => 'tar', 'TAR376G0435' => 'tar', 'TAR381G0002' => 'tar', 'TAR381G1236' => 'tar', 'TAR624G0055' => 'tar', 'TAR624G0324' => 'tar', 'TAR624G0696' => 'tar', 'TAR624G0906' => 'tar', 'TAR625G0107' => 'tar', 'TAR626G0015' => 'tar', 'TAR626G1356' => 'tar', 'TAR627G0888' => 'tar', 'TAR628G0399' => 'tar', 'TAR628G1327' => 'tar', 'TAR629G2831' => 'tar', 'TAR629G2874' => 'tar', 'TAR633G1432' => 'tar', 'TAR633G2771' => 'tar', 'THA.LOC104803394' => 'tha', 'THA.LOC104805153' => 'tha', 'THA.LOC104806784' => 'tha', 'THA.LOC104810473' => 'tha', 'THA.LOC104813100' => 'tha', 'THA.LOC104814215' => 'tha', 'THA.LOC104815554' => 'tha', 'THA.LOC104820544' => 'tha', 'THA.LOC104824754' => 'tha', 'THA.LOC104827717' => 'tha', 'Thecc.02G031400' => 'tca', 'Thecc.02G055900' => 'tca', 'Thecc.02G350800' => 'tca', 'Thecc.06G150900' => 'tca', 'Thecc.06G186600' => 'tca', 'Thecc.07G089600' => 'tca', 'Thecc.08G020400' => 'tca', 'Thecc.08G182100' => 'tca', 'Thhalv10000873m.g' => 'esa', 'Thhalv10004185m.g' => 'esa', 'Thhalv10006981m.g' => 'esa', 'Thhalv10007204m.g' => 'esa', 'Thhalv10011374m.g' => 'esa', 'Thhalv10013482m.g' => 'esa', 'Thhalv10017801m.g' => 'esa', 'Thhalv10024983m.g' => 'esa', 'TPR.G12072' => 'tpr', 'TPR.G15769' => 'tpr', 'TPR.G16504' => 'tpr', 'TPR.G16506' => 'tpr', 'TPR.G24345' => 'tpr', 'TPR.G26666' => 'tpr', 'TPR.G27320' => 'tpr', 'TPR.G31819' => 'tpr', 'TPR.G38879' => 'tpr', 'TPR.G39015' => 'tpr', 'TPR.G8819' => 'tpr', 'TWI09G0924' => 'twi', 'TWI12G0811' => 'twi', 'TWI12G1294' => 'twi', 'TWI31G0150' => 'twi', 'TWI36G1262' => 'twi', 'TWI38G1287' => 'twi', 'TWI38G1633' => 'twi', 'TWI38G1982' => 'twi', 'TWI39G0116' => 'twi', 'TWI60G1011' => 'twi', 'TWI63G0171' => 'twi', 'TWI73G0839' => 'twi', 'TWI79G1511' => 'twi', 'unitig_0.g915' => 'ugi', 'unitig_0.g916' => 'ugi', 'unitig_21.g20219' => 'ugi', 'unitig_21.g20416' => 'ugi', 'unitig_578.g16132' => 'ugi', 'unitig_578.g16718' => 'ugi', 'unitig_62.g23481' => 'ugi', 'unitig_744.g24535' => 'ugi', 'unitig_749.g13525' => 'ugi', 'vmacro01248' => 'vma', 'vmacro02290' => 'vma', 'vmacro10946' => 'vma', 'vmacro11865' => 'vma', 'vmacro12493' => 'vma', 'vmacro17322' => 'vma', 'vmacro21599' => 'vma', 'vmacro23041' => 'vma', 'VMungo0251G0004' => 'vmu', 'VMungo0251G2639' => 'vmu', 'VMungo0251G2967' => 'vmu', 'VMungo0540G0864' => 'vmu', 'VMungo0540G1569' => 'vmu', 'VMungo0647G0317' => 'vmu', 'VMungo0720G1373' => 'vmu', 'VMungo0720G1508' => 'vmu', 'VMungo1080G0485' => 'vmu', 'VMungo1215G3177' => 'vmu', 'Zm00001eb112600' => 'zma', 'Zm00001eb120220' => 'zma', 'Zm00001eb153240' => 'zma', 'Zm00001eb168880' => 'zma', 'Zm00001eb213920' => 'zma', 'Zm00001eb228280' => 'zma', 'Zm00001eb254580' => 'zma', 'Zm00001eb272180' => 'zma', 'Zm00001eb293190' => 'zma', 'Zm00001eb322930' => 'zma', 'Zm00001eb353360' => 'zma', 'Zm00001eb353390' => 'zma', 'Zm00001eb353430' => 'zma', 'Zm00001eb353440' => 'zma', 'Zm00001eb353780' => 'zma' ) $gf_id = 'HOM05D000499' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000499' ) $data_identifier = 'HOM05D000499' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 29, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 12, 'amhyb' => (int) 8, 'aly' => (int) 12, 'aox' => (int) 9, 'arhy' => (int) 26, 'ath' => (int) 8, 'atr' => (int) 7, 'acertr' => (int) 10, 'cqu' => (int) 15, 'bca' => (int) 29, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 11, 'cansat' => (int) 8, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 9, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 8, 'cpa' => (int) 10, 'csa' => (int) 7, 'camsi' => (int) 20, 'dca' => (int) 8, 'din' => (int) 12, 'dzi' => (int) 14, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 6, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 38, 'gra' => (int) 16, 'vvi' => (int) 8, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 5, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 11, 'lja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 11, 'mpo' => (int) 3, 'mbi' => (int) 14, 'mdo' => (int) 14, 'mtr' => (int) 8, 'cme' => (int) 9, 'egut' => (int) 9, 'ama' => (int) 11, 'nta' => (int) 17, 'nnu' => (int) 11, 'oeu' => (int) 18, 'osa' => (int) 8, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 6, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 9, 'rsi' => (int) 9, 'sbr' => (int) 10, 'sbo' => (int) 8, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 10, 'sas' => (int) 10, 'shi' => (int) 6, 'smo' => (int) 7, 'sly' => (int) 14, 'spe' => (int) 10, 'spa' => (int) 8, 'tar' => (int) 19, 'tha' => (int) 10, 'tca' => (int) 8, 'esa' => (int) 8, 'tpr' => (int) 11, 'twi' => (int) 13, 'ugi' => (int) 9, 'vma' => (int) 8, 'vmu' => (int) 10, 'zma' => (int) 15 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb353780' $species_info = array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ) $local_species = 'tpr' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000499', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1066', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p29780' => 'bna', 'A02p33180' => 'bna', 'A03p16470' => 'bna', 'A03p66010' => 'bna', 'A04p25970' => 'bna', 'A06p01270' => 'bna', 'A06p46080' => 'bna', 'A07p11400' => 'bna', 'A08p01840' => 'bna', 'A08p08230' => 'bna', 'A08p25740' => 'bna', 'A09p32070' => 'bna', 'A09p37830' => 'bna', 'A09p42840' => 'bna', 'A09p42850' => 'bna', 'Aa31LG10G2060' => 'aar', 'Aa31LG2G7410' => 'aar', 'Aa31LG6G10200' => 'aar', 'Aa31LG6G16680' => 'aar', 'Aa31LG6G8470' => 'aar', 'Aa31LG9G12730' => 'aar', 'Aa31LG9G13680' => 'aar', 'Aa31LG9G14920' => 'aar', 'Aa31LG9G6650' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4977' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5467' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3254' => 'aag', 'Actinidia02578' => 'ach', 'Actinidia07693' => 'ach', 'Actinidia08413' => 'ach', 'Actinidia08414' => 'ach', 'Actinidia15289' => 'ach', 'Actinidia19871' => 'ach', 'Actinidia21475' => 'ach', 'Actinidia22576' => 'ach', 'Actinidia28327' => 'ach', 'Actinidia32491' => 'ach', 'Actinidia39463' => 'ach', 'Actinidia39571' => 'ach', 'Ah.01g013750' => 'amhyb', 'Ah.01g023210' => 'amhyb', 'Ah.04g164850' => 'amhyb', 'Ah.05g178060' => 'amhyb', 'Ah.07g204270' => 'amhyb', 'Ah.07g208480' => 'amhyb', 'Ah.09g237410' => 'amhyb', 'Ah.14g089460' => 'amhyb', 'AL1G41790' => 'aly', 'AL1G49050' => 'aly', 'AL1G53810' => 'aly', 'AL1G61400' => 'aly', 'AL4G18580' => 'aly', 'AL5G12510' => 'aly', 'AL5G12540' => 'aly', 'AL6G43230' => 'aly', 'AL7G10370' => 'aly', 'AL7G19250' => 'aly', 'AL8G12240' => 'aly', 'AL8G18540' => 'aly', 'Aqoxy1G02409' => 'aox', 'Aqoxy2G03993' => 'aox', 'Aqoxy3G03357' => 'aox', 'Aqoxy4G00785' => 'aox', 'Aqoxy5G02598' => 'aox', 'Aqoxy6G00132' => 'aox', 'Aqoxy7G01776' => 'aox', 'Aqoxy7G02316' => 'aox', 'Aqoxy7G03973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.12AFKW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B8730' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27IQR1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3F75VG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3RE0GA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41TCQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.527VTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FIR39' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5W8UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DA38EV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ63HS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H1I32C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HC27T5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4M8AP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7N3CZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9UVDZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LS1NQA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT1D4B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SKC4TM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCFV76' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF9Q1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQWD9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1ZM88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WE07RT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YCK7VH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJE6Q6' => 'arhy', 'AT1G28240' => 'ath', 'AT1G34550' => 'ath', 'AT1G53040' => 'ath', 'AT2G02910' => 'ath', 'AT4G09630' => 'ath', 'AT4G38500' => 'ath', 'AT5G42660' => 'ath', 'AT5G46220' => 'ath', 'ATR0152G026' => 'atr', 'ATR0564G343' => 'atr', 'ATR0706G151' => 'atr', 'ATR0733G207' => 'atr', 'ATR0751G234' => 'atr', 'ATR0807G048' => 'atr', 'ATR1091G084' => 'atr', 'Atru.chr10.1229' => 'acertr', 'Atru.chr10.1230' => 'acertr', 'Atru.chr10.1874' => 'acertr', 'Atru.chr11.1808' => 'acertr', 'Atru.chr13.1795' => 'acertr', 'Atru.chr13.570' => 'acertr', 'Atru.chr2.2608' => 'acertr', 'Atru.chr2.2609' => 'acertr', 'Atru.chr5.3428' => 'acertr', 'Atru.chr8.1171' => 'acertr', 'AUR62004651' => 'cqu', 'AUR62008675' => 'cqu', 'AUR62010014' => 'cqu', 'AUR62013004' => 'cqu', 'AUR62014825' => 'cqu', 'AUR62015015' => 'cqu', 'AUR62015151' => 'cqu', 'AUR62017020' => 'cqu', 'AUR62019422' => 'cqu', 'AUR62023570' => 'cqu', 'AUR62025571' => 'cqu', 'AUR62029098' => 'cqu', 'AUR62033863' => 'cqu', 'AUR62034296' => 'cqu', 'AUR62040075' => 'cqu', 'BcaB02g07334' => 'bca', 'BcaB02g10575' => 'bca', 'BcaB03g12119' => 'bca', 'BcaB03g12120' => 'bca', 'BcaB03g13945' => 'bca', 'BcaB04g17123' => 'bca', 'BcaB04g17867' => 'bca', 'BcaB04g19839' => 'bca', 'BcaB07g30317' => 'bca', 'BcaB07g32432' => 'bca', 'BcaB07g33362' => 'bca', 'BcaB08g36611' => 'bca', 'BcaC01g00028' => 'bca', 'BcaC01g01356' => 'bca', 'BcaC01g02034' => 'bca', 'BcaC01g06051' => 'bca', 'BcaC03g16839' => 'bca', 'BcaC03g17176' => 'bca', 'BcaC05g26829' => 'bca', 'BcaC06g31490' => 'bca', 'BcaC06g35344' => 'bca', 'BcaC06g36570' => 'bca', 'BcaC07g37537' => 'bca', 'BcaC08g43491' => 'bca', 'BcaC08g43773' => 'bca', 'BcaNung00234' => 'bca', 'BcaNung01982' => 'bca', 'BcaNung03707' => 'bca', 'BcaNung06454' => 'bca', 'BolC2t10762H' => 'bol', 'BolC2t11191H' => 'bol', 'BolC3t14322H' => 'bol', 'BolC3t19747H' => 'bol', 'BolC3t21425H' => 'bol', 'BolC4t27800H' => 'bol', 'BolC5t31423H' => 'bol', 'BolC6t35951H' => 'bol', 'BolC6t36282H' => 'bol', 'BolC7t40678H' => 'bol', 'BolC7t40679H' => 'bol', 'BolC7t42222H' => 'bol', 'BolC7t43492H' => 'bol', 'BolC7t46785H' => 'bol', 'BolC8t47853H' => 'bol', 'BolC9t56805H' => 'bol', 'BraA02t08000Z' => 'bra', 'BraA02t08341Z' => 'bra', 'BraA03t10936Z' => 'bra', 'BraA03t15657Z' => 'bra', 'BraA04t18100Z' => 'bra', 'BraA05t20523Z' => 'bra', 'BraA06t23353Z' => 'bra', 'BraA06t27473Z' => 'bra', 'BraA06t27769Z' => 'bra', 'BraA07t28928Z' => 'bra', 'BraA08t32236Z' => 'bra', 'BraA08t32841Z' => 'bra', 'BraA08t34524Z' => 'bra', 'BraA09t38742Z' => 'bra', 'BraA09t39295Z' => 'bra', 'C02p47180' => 'bna', 'C02p50990' => 'bna', 'C03p19360' => 'bna', 'C03p74950' => 'bna', 'C03p91000' => 'bna', 'C04p63260' => 'bna', 'C05p27050' => 'bna', 'C06p08750' => 'bna', 'C06p11490' => 'bna', 'C07p02820' => 'bna', 'C07p17180' => 'bna', 'C07p29440' => 'bna', 'C07p63730' => 'bna', 'C09p39260' => 'bna', 'CAN.G1164.34' => 'can', 'CAN.G1164.39' => 'can', 'CAN.G1530.3' => 'can', 'CAN.G162.61' => 'can', 'CAN.G176.6' => 'can', 'CAN.G289.49' => 'can', 'CAN.G370.21' => 'can', 'CAN.G370.22' => 'can', 'CAN.G371.117' => 'can', 'CAN.G58.37' => 'can', 'CAN.G588.98' => 'can', 'CANSAT21G2266' => 'cansat', 'CANSAT25G2799' => 'cansat', 'CANSAT35G0862' => 'cansat', 'CANSAT35G1704' => 'cansat', 'CANSAT35G1760' => 'cansat', 'CANSAT56G3971' => 'cansat', 'CANSAT56G4116' => 'cansat', 'CANSAT80G1259' => 'cansat', 'CARHR027730' => 'chi', 'CARHR033880' => 'chi', 'CARHR043270' => 'chi', 'CARHR145330' => 'chi', 'CARHR145340' => 'chi', 'CARHR175570' => 'chi', 'CARHR181570' => 'chi', 'CARHR258470' => 'chi', 'CARHR260490' => 'chi', 'CARHR294220' => 'chi', 'Carub.0001s2668' => 'cru', 'Carub.0001s3257' => 'cru', 'Carub.0001s4220' => 'cru', 'Carub.0005s0179' => 'cru', 'Carub.0006s2807' => 'cru', 'Carub.0007s0039' => 'cru', 'Carub.0008s0169' => 'cru', 'Carub.0008s0636' => 'cru', 'Ca_00338_v3' => 'car', 'Ca_00542_v3' => 'car', 'Ca_01844_v3' => 'car', 'Ca_10611_v3' => 'car', 'Ca_13326_v3' => 'car', 'Ca_17944_v3' => 'car', 'Ca_18546_v3' => 'car', 'Ca_24219_v3' => 'car', 'Ca_29972_v3' => 'car', 'CBR_g3681' => 'cbr', 'CBR_g40021' => 'cbr', 'Cc01_g08140' => 'ccan', 'Cc02_g13410' => 'ccan', 'Cc02_g37480' => 'ccan', 'Cc05_g12030' => 'ccan', 'Cc09_g03370' => 'ccan', 'Cc09_g10300' => 'ccan', 'Cc10_g03530' => 'ccan', 'Cc10_g11380' => 'ccan', 'CDE01G0176' => 'cde', 'CDE02G0675' => 'cde', 'CDE02G0942' => 'cde', 'CDE02G1153' => 'cde', 'CDE02G4177' => 'cde', 'CDE04G2117' => 'cde', 'CDE04G2736' => 'cde', 'CDE08G1161' => 'cde', 'CDE09G1238' => 'cde', 'Cfa000467' => 'cfa', 'Cfa000947' => 'cfa', 'Cfa004969' => 'cfa', 'Cfa005284' => 'cfa', 'Cfa008993' => 'cfa', 'Cfa018187' => 'cfa', 'Cfa018454' => 'cfa', 'Cfa020585' => 'cfa', 'Ciclev10000424m.g' => 'ccl', 'Ciclev10003605m.g' => 'ccl', 'Ciclev10007828m.g' => 'ccl', 'Ciclev10014620m.g' => 'ccl', 'Ciclev10015169m.g' => 'ccl', 'Ciclev10018291m.g' => 'ccl', 'Ciclev10028256m.g' => 'ccl', 'Ciclev10033822m.g' => 'ccl', 'CiPaw.05G060300' => 'cil', 'CiPaw.05G085000' => 'cil', 'CiPaw.06G083700' => 'cil', 'CiPaw.06G120300' => 'cil', 'CiPaw.09G060500' => 'cil', 'CiPaw.09G123800' => 'cil', 'CiPaw.11G169700' => 'cil', 'CiPaw.12G118300' => 'cil', 'CiPaw.15G071000' => 'cil', 'CiPaw.15G081900' => 'cil', 'ClCG01G024610' => 'cla', 'ClCG03G006070' => 'cla', 'ClCG05G019250' => 'cla', 'ClCG09G009500' => 'cla', 'ClCG11G008200' => 'cla', 'ClCG11G018080' => 'cla', 'COL.COLO4_17373' => 'col', 'COL.COLO4_22994' => 'col', 'COL.COLO4_26389' => 'col', 'COL.COLO4_27170' => 'col', 'COL.COLO4_31074' => 'col', 'COL.COLO4_31465' => 'col', 'COL.COLO4_36438' => 'col', 'COL.COLO4_36439' => 'col', 'Cpa.g.c38781' => 'cpa', 'Cpa.g.sc128.12' => 'cpa', 'Cpa.g.sc166.7' => 'cpa', 'Cpa.g.sc166.8' => 'cpa', 'Cpa.g.sc20.111' => 'cpa', 'Cpa.g.sc27.31' => 'cpa', 'Cpa.g.sc64.36' => 'cpa', 'Cpa.g.sc64.37' => 'cpa', 'Cpa.g.sc66.49' => 'cpa', 'Cpa.g.sc80.64' => 'cpa', 'CsaV3_1G012320' => 'csa', 'CsaV3_2G008480' => 'csa', 'CsaV3_2G033450' => 'csa', 'CsaV3_3G044830' => 'csa', 'CsaV3_4G033710' => 'csa', 'CsaV3_6G051730' => 'csa', 'CsaV3_7G025350' => 'csa', 'CSS0001067' => 'camsi', 'CSS0005996' => 'camsi', 'CSS0006590' => 'camsi', 'CSS0009673' => 'camsi', 'CSS0010201' => 'camsi', 'CSS0010549' => 'camsi', 'CSS0011364' => 'camsi', 'CSS0014473' => 'camsi', 'CSS0014961' => 'camsi', 'CSS0020191' => 'camsi', 'CSS0021165' => 'camsi', 'CSS0022306' => 'camsi', 'CSS0030591' => 'camsi', 'CSS0030696' => 'camsi', 'CSS0032653' => 'camsi', 'CSS0037487' => 'camsi', 'CSS0041102' => 'camsi', 'CSS0041261' => 'camsi', 'CSS0046246' => 'camsi', 'CSS0049256' => 'camsi', 'DCAR_004075' => 'dca', 'DCAR_011538' => 'dca', 'DCAR_019553' => 'dca', 'DCAR_020952' => 'dca', 'DCAR_021739' => 'dca', 'DCAR_027407' => 'dca', 'DCAR_027913' => 'dca', 'DCAR_028066' => 'dca', 'Dinv05899' => 'din', 'Dinv07563' => 'din', 'Dinv08010' => 'din', 'Dinv14125' => 'din', 'Dinv20172' => 'din', 'Dinv30743' => 'din', 'Dinv31229' => 'din', 'Dinv34162' => 'din', 'Dinv36028' => 'din', 'Dinv39368' => 'din', 'Dinv40565' => 'din', 'Dinv41706' => 'din', 'Duzib052G0089' => 'dzi', 'Duzib116G0641' => 'dzi', 'Duzib132G0069' => 'dzi', 'Duzib132G1219' => 'dzi', 'Duzib147G0278' => 'dzi', 'Duzib160G0480' => 'dzi', 'Duzib170G0661' => 'dzi', 'Duzib177G0591' => 'dzi', 'Duzib187G1353' => 'dzi', 'Duzib192G0858' => 'dzi', 'Duzib192G0883' => 'dzi', 'Duzib213G0506' => 'dzi', 'Duzib235G0289' => 'dzi', 'Duzib251G0422' => 'dzi', 'ECA232G3898' => 'eca', 'ECA233G5950' => 'eca', 'ECA234G1699' => 'eca', 'ECA234G2421' => 'eca', 'ECA236G0426' => 'eca', 'ECA236G4331' => 'eca', 'ECA248G2573' => 'eca', 'EL10Ac1g00077' => 'bvu', 'EL10Ac1g01746' => 'bvu', 'EL10Ac2g03464' => 'bvu', 'EL10Ac4g08176' => 'bvu', 'EL10Ac7g17521' => 'bvu', 'EL10Ac8g20386' => 'bvu', 'EL10Ac9g21343' => 'bvu', 'EL10Ac9g22688' => 'bvu', 'Eucgr.B03434' => 'egr', 'Eucgr.D00618' => 'egr', 'Eucgr.E02395' => 'egr', 'Eucgr.F01129' => 'egr', 'Eucgr.F02622' => 'egr', 'Eucgr.F04207' => 'egr', 'FAN01G0570' => 'fan', 'FAN03G3351' => 'fan', 'FAN06G3702' => 'fan', 'FAN07G2149' => 'fan', 'FAN10G3758' => 'fan', 'FAN11G1170' => 'fan', 'FAN11G2050' => 'fan', 'FAN11G2724' => 'fan', 'FAN12G1700' => 'fan', 'FAN12G2028' => 'fan', 'FAN15G1160' => 'fan', 'FAN15G3063' => 'fan', 'FAN16G2540' => 'fan', 'FAN16G3077' => 'fan', 'FAN16G3624' => 'fan', 'FAN17G0221' => 'fan', 'FAN20G2492' => 'fan', 'FAN20G2905' => 'fan', 'FAN21G0548' => 'fan', 'FAN21G1300' => 'fan', 'FAN22G0077' => 'fan', 'FAN22G1315' => 'fan', 'FAN24G1280' => 'fan', 'FAN24G1445' => 'fan', 'FAN24G3527' => 'fan', 'FAN25G0464' => 'fan', 'FAN25G2885' => 'fan', 'FAN25G3270' => 'fan', 'FAN27G1101' => 'fan', 'FAN27G2846' => 'fan', 'FAN27G3524' => 'fan', 'FvH4_2g11770' => 'fve', 'FvH4_2g15630' => 'fve', 'FvH4_3g05570' => 'fve', 'FvH4_3g09110' => 'fve', 'FvH4_3g19940' => 'fve', 'FvH4_4g04821' => 'fve', 'FvH4_4g31480' => 'fve', 'FvH4_7g01740' => 'fve', 'Glyma.05G130400' => 'gma', 'Glyma.05G156400' => 'gma', 'Glyma.07G197000' => 'gma', 'Glyma.08G085151' => 'gma', 'Glyma.08G114500' => 'gma', 'Glyma.08G300400' => 'gma', 'Glyma.10G215800' => 'gma', 'Glyma.12G224400' => 'gma', 'Glyma.13G179300' => 'gma', 'Glyma.13G218151' => 'gma', 'Glyma.13G238800' => 'gma', 'Glyma.13G276900' => 'gma', 'Glyma.14G078200' => 'gma', 'Glyma.15G074500' => 'gma', 'Glyma.15G094100' => 'gma', 'Glyma.17G247200' => 'gma', 'Glyma.18G120100' => 'gma', 'Glyma.20G176000' => 'gma', 'Gohir.A01G063600' => 'ghi', 'Gohir.A01G170301' => 'ghi', 'Gohir.A02G060500' => 'ghi', 'Gohir.A05G133850' => 'ghi', 'Gohir.A05G161400' => 'ghi', 'Gohir.A06G012900' => 'ghi', 'Gohir.A06G035901' => 'ghi', 'Gohir.A06G127100' => 'ghi', 'Gohir.A06G210500' => 'ghi', 'Gohir.A08G008650' => 'ghi', 'Gohir.A09G072700' => 'ghi', 'Gohir.A09G088301' => 'ghi', 'Gohir.A10G040600' => 'ghi', 'Gohir.A12G036300' => 'ghi', 'Gohir.A12G143350' => 'ghi', 'Gohir.A12G165500' => 'ghi', 'Gohir.A13G145700' => 'ghi', 'Gohir.D01G050000' => 'ghi', 'Gohir.D01G051366' => 'ghi', 'Gohir.D01G161350' => 'ghi', 'Gohir.D02G065900' => 'ghi', 'Gohir.D05G164200' => 'ghi', 'Gohir.D05G355500' => 'ghi', 'Gohir.D06G010400' => 'ghi', 'Gohir.D06G111250' => 'ghi', 'Gohir.D06G132000' => 'ghi', 'Gohir.D06G210500' => 'ghi', 'Gohir.D07G165675' => 'ghi', 'Gohir.D08G062240' => 'ghi', 'Gohir.D08G086101' => 'ghi', 'Gohir.D08G138060' => 'ghi', 'Gohir.D09G072300' => 'ghi', 'Gohir.D10G041400' => 'ghi', 'Gohir.D11G191020' => 'ghi', 'Gohir.D11G212066' => 'ghi', 'Gohir.D12G036300' => 'ghi', 'Gohir.D12G168600' => 'ghi', 'Gohir.D13G150600' => 'ghi', 'Gorai.001G057300' => 'gra', 'Gorai.002G069900' => 'gra', 'Gorai.002G200000' => 'gra', 'Gorai.003G067600' => 'gra', 'Gorai.005G074800' => 'gra', 'Gorai.006G087300' => 'gra', 'Gorai.008G037500' => 'gra', 'Gorai.008G181400' => 'gra', 'Gorai.009G169400' => 'gra', 'Gorai.009G387900' => 'gra', 'Gorai.010G013300' => 'gra', 'Gorai.010G153800' => 'gra', 'Gorai.010G255800' => 'gra', 'Gorai.011G043700' => 'gra', 'Gorai.011G198900' => 'gra', 'Gorai.013G168400' => 'gra', 'GSVIVG01005212001' => 'vvi', 'GSVIVG01006163001' => 'vvi', 'GSVIVG01009625001' => 'vvi', 'GSVIVG01014338001' => 'vvi', 'GSVIVG01020005001' => 'vvi', 'GSVIVG01021450001' => 'vvi', 'GSVIVG01023975001' => 'vvi', 'GSVIVG01034490001' => 'vvi', 'HanXRQChr04g0112071' => 'han', 'HanXRQChr05g0131151' => 'han', 'HanXRQChr09g0262371' => 'han', 'HanXRQChr09g0268401' => 'han', 'HanXRQChr10g0279241' => 'han', 'HanXRQChr10g0297961' => 'han', 'HanXRQChr11g0326231' => 'han', 'HanXRQChr11g0328471' => 'han', 'HanXRQChr16g0507941' => 'han', 'HanXRQChr17g0560211' => 'han', 'Haze_02108' => 'cav', 'Haze_02428' => 'cav', 'Haze_05593' => 'cav', 'Haze_06448' => 'cav', 'Haze_09427' => 'cav', 'Haze_12022' => 'cav', 'Haze_17612' => 'cav', 'Haze_17928' => 'cav', 'Hma1.2p1_0032F.1_g019250' => 'hma', 'Hma1.2p1_0163F.1_g072690' => 'hma', 'Hma1.2p1_0265F.1_g106710' => 'hma', 'Hma1.2p1_0286F.1_g113970' => 'hma', 'Hma1.2p1_0363F.1_g136640' => 'hma', 'Hma1.2p1_0584F.1_g183470' => 'hma', 'Hma1.2p1_0885F.1_g232570' => 'hma', 'HPP92_006022' => 'vpl', 'HPP92_007320' => 'vpl', 'HPP92_011521' => 'vpl', 'HPP92_019387' => 'vpl', 'HPP92_024038' => 'vpl', 'Hund05891' => 'sun', 'Hund06450' => 'sun', 'Hund12053' => 'sun', 'Hund16800' => 'sun', 'Hund21222' => 'sun', 'Hund22896' => 'sun', 'Hund23746' => 'sun', 'Hund27083' => 'sun', 'Lalb_Chr02g0141831' => 'lal', 'Lalb_Chr02g0141841' => 'lal', 'Lalb_Chr05g0220411' => 'lal', 'Lalb_Chr06g0162081' => 'lal', 'Lalb_Chr09g0327651' => 'lal', 'Lalb_Chr13g0295051' => 'lal', 'Lalb_Chr15g0086801' => 'lal', 'Lalb_Chr16g0383781' => 'lal', 'Lalb_Chr16g0383791' => 'lal', 'Lalb_Chr18g0055441' => 'lal', 'Lalb_Chr18g0059611' => 'lal', 'Lalb_Chr20g0109661' => 'lal', 'Lalb_Chr20g0109831' => 'lal', 'Lalb_Chr20g0121871' => 'lal', 'Lalb_Chr22g0355361' => 'lal', 'Lalb_Chr25g0286371' => 'lal', 'Lj1A1187G43' => 'lonja', 'Lj1A1205T50' => 'lonja', 'Lj1A800G33' => 'lonja', 'Lj1C1187T7' => 'lonja', 'Lj1C843T11' => 'lonja', 'Lj1g0010940' => 'lja', 'Lj2A288T69' => 'lonja', 'Lj3g0024276' => 'lja', 'Lj4A47T76' => 'lonja', 'Lj4g0005805' => 'lja', 'Lj4g0006097' => 'lja', 'Lj4g0008528' => 'lja', 'Lj4g0024907' => 'lja', 'Lj5g0012472' => 'lja', 'Lj5g0018648' => 'lja', 'Lj6C789G1' => 'lonja', 'Lj6g0004000' => 'lja', 'Lj7A292G67' => 'lonja', 'Lj7A292T64' => 'lonja', 'Lj9A400T58' => 'lonja', 'Lsat_1_v5_gn_1_126181' => 'lsa', 'Lsat_1_v5_gn_4_123041' => 'lsa', 'Lsat_1_v5_gn_4_133620' => 'lsa', 'Lsat_1_v5_gn_4_53221' => 'lsa', 'Lsat_1_v5_gn_4_71961' => 'lsa', 'Lsat_1_v5_gn_7_105241' => 'lsa', 'Lsat_1_v5_gn_7_21361' => 'lsa', 'Lsat_1_v5_gn_7_28860' => 'lsa', 'Lsat_1_v5_gn_7_31260' => 'lsa', 'Lsat_1_v5_gn_8_52801' => 'lsa', 'Manes.02G191400' => 'mes', 'Manes.03G110100' => 'mes', 'Manes.04G071100' => 'mes', 'Manes.05G100500' => 'mes', 'Manes.05G164700' => 'mes', 'Manes.15G087000' => 'mes', 'Manes.15G121500' => 'mes', 'Manes.16G028300' => 'mes', 'Manes.17G046100' => 'mes', 'Manes.17G069800' => 'mes', 'Manes.18G100500' => 'mes', 'Mapoly0002s0109' => 'mpo', 'Mapoly0024s0007' => 'mpo', 'Mapoly0089s0032' => 'mpo', 'MBI04_g42241_MAGBIO' => 'mbi', 'MBI05_g11988_MAGBIO' => 'mbi', 'MBI05_g35452_MAGBIO' => 'mbi', 'MBI07_g30179_MAGBIO' => 'mbi', 'MBI07_g35859_MAGBIO' => 'mbi', 'MBI07_g35860_MAGBIO' => 'mbi', 'MBI07_g37166_MAGBIO' => 'mbi', 'MBI08_g18172_MAGBIO' => 'mbi', 'MBI09_g08441_MAGBIO' => 'mbi', 'MBI13_g01676_MAGBIO' => 'mbi', 'MBI14_g42955_MAGBIO' => 'mbi', 'MBI16_g13161_MAGBIO' => 'mbi', 'MBI17_g27204_MAGBIO' => 'mbi', 'MBI19_g21595_MAGBIO' => 'mbi', 'MD00G1148400' => 'mdo', 'MD02G1301200' => 'mdo', 'MD03G1227800' => 'mdo', 'MD05G1041100' => 'mdo', 'MD05G1124800' => 'mdo', 'MD05G1284000' => 'mdo', 'MD05G1338800' => 'mdo', 'MD05G1338900' => 'mdo', 'MD07G1022800' => 'mdo', 'MD10G1047500' => 'mdo', 'MD10G1127500' => 'mdo', 'MD10G1262300' => 'mdo', 'MD10G1293800' => 'mdo', 'MD16G1074300' => 'mdo', 'Medtr1g021670' => 'mtr', 'Medtr1g096320' => 'mtr', 'Medtr2g013690' => 'mtr', 'Medtr2g019450' => 'mtr', 'Medtr2g085170' => 'mtr', 'Medtr4g088785' => 'mtr', 'Medtr8g055930' => 'mtr', 'Medtr8g085850' => 'mtr', 'MELO3C002605.2' => 'cme', 'MELO3C003891.2' => 'cme', 'MELO3C004012.2' => 'cme', 'MELO3C007134.2' => 'cme', 'MELO3C008118.2' => 'cme', 'MELO3C016700.2' => 'cme', 'MELO3C024127.2' => 'cme', 'MELO3C033361.2' => 'cme', 'MELO3C033362.2' => 'cme', 'Migut.C00430' => 'egut', 'Migut.C01246' => 'egut', 'Migut.E00101' => 'egut', 'Migut.H01486' => 'egut', 'Migut.H01939' => 'egut', 'Migut.K00360' => 'egut', 'Migut.M00910' => 'egut', 'Migut.M01139' => 'egut', 'Migut.N02677' => 'egut', 'MSTRG.13252' => 'ama', 'MSTRG.14701' => 'ama', 'MSTRG.1521' => 'ama', 'MSTRG.15884' => 'ama', 'MSTRG.16242' => 'ama', 'MSTRG.22285' => 'ama', 'MSTRG.22444' => 'ama', 'MSTRG.2349' => 'ama', 'MSTRG.26308' => 'ama', 'MSTRG.28296' => 'ama', 'MSTRG.9895' => 'ama', 'Nitab4.5_0000110g0060' => 'nta', 'Nitab4.5_0000420g0130' => 'nta', 'Nitab4.5_0000422g0030' => 'nta', 'Nitab4.5_0000560g0180' => 'nta', 'Nitab4.5_0000703g0100' => 'nta', 'Nitab4.5_0000786g0200' => 'nta', 'Nitab4.5_0001336g0020' => 'nta', 'Nitab4.5_0001796g0030' => 'nta', 'Nitab4.5_0003348g0060' => 'nta', 'Nitab4.5_0003698g0040' => 'nta', 'Nitab4.5_0003942g0090' => 'nta', 'Nitab4.5_0004775g0070' => 'nta', 'Nitab4.5_0004864g0030' => 'nta', 'Nitab4.5_0005615g0020' => 'nta', 'Nitab4.5_0009288g0030' => 'nta', 'Nitab4.5_0009341g0010' => 'nta', 'Nitab4.5_0009535g0010' => 'nta', 'Nn1g03995' => 'nnu', 'Nn1g04100' => 'nnu', 'Nn1g06530' => 'nnu', 'Nn3g16404' => 'nnu', 'Nn3g17212' => 'nnu', 'Nn3g20776' => 'nnu', 'Nn3g21923' => 'nnu', 'Nn5g27737' => 'nnu', 'Nn5g29461' => 'nnu', 'Nn7g38355' => 'nnu', 'Nn8g39873' => 'nnu', 'Oeu000548.2' => 'oeu', 'Oeu004672.1' => 'oeu', 'Oeu015605.2' => 'oeu', 'Oeu016092.1' => 'oeu', 'Oeu017879.3' => 'oeu', 'Oeu024910.1' => 'oeu', 'Oeu028965.1' => 'oeu', 'Oeu031269.1' => 'oeu', 'Oeu031270.1' => 'oeu', 'Oeu032535.1' => 'oeu', 'Oeu034151.1' => 'oeu', 'Oeu034152.1' => 'oeu', 'Oeu034588.2' => 'oeu', 'Oeu050846.1' => 'oeu', 'Oeu050849.2' => 'oeu', 'Oeu051063.2' => 'oeu', 'Oeu052368.1' => 'oeu', 'Oeu052370.1' => 'oeu', 'Os01g0210400' => 'osa', 'Os01g0304300' => 'osa', 'Os01g0749100' => 'osa', 'Os02g0745800' => 'osa', 'Os03g0769050' => 'osa', 'Os05g0531500' => 'osa', 'Os06g0724300' => 'osa', 'Os11g0198100' => 'osa', 'Peaxi162Scf00069g01425' => 'pax', 'Peaxi162Scf00280g00811' => 'pax', 'Peaxi162Scf00310g00615' => 'pax', 'Peaxi162Scf00362g00542' => 'pax', 'Peaxi162Scf00461g00310' => 'pax', 'Peaxi162Scf00530g00118' => 'pax', 'Peaxi162Scf00541g00057' => 'pax', 'Peaxi162Scf00661g00017' => 'pax', 'Peaxi162Scf00926g00027' => 'pax', 'Peaxi162Scf01064g00263' => 'pax', 'Peaxi162Scf01211g00135' => 'pax', 'PGR004G2336' => 'pgr', 'PGR042G0327' => 'pgr', 'PGR042G1957' => 'pgr', 'PGR042G2003' => 'pgr', 'PGR042G3929' => 'pgr', 'PGR083G1137' => 'pgr', 'PGR083G1364' => 'pgr', 'PGSC0003DMG400003381' => 'stu', 'PGSC0003DMG400003417' => 'stu', 'PGSC0003DMG400008981' => 'stu', 'PGSC0003DMG400012417' => 'stu', 'PGSC0003DMG400012823' => 'stu', 'PGSC0003DMG400016885' => 'stu', 'PGSC0003DMG400022812' => 'stu', 'PGSC0003DMG400029726' => 'stu', 'PGSC0003DMG401009243' => 'stu', 'PGSC0003DMG401031505' => 'stu', 'PGSC0003DMG402031505' => 'stu', 'Phvul.001G017600' => 'pvu', 'Phvul.002G193500' => 'pvu', 'Phvul.002G228900' => 'pvu', 'Phvul.002G236800' => 'pvu', 'Phvul.003G049500' => 'pvu', 'Phvul.005G072000' => 'pvu', 'Phvul.006G164800' => 'pvu', 'Phvul.006G185100' => 'pvu', 'Phvul.007G090000' => 'pvu', 'Potri.001G399800' => 'ptr', 'Potri.002G149900' => 'ptr', 'Potri.004G044100' => 'ptr', 'Potri.004G177600' => 'ptr', 'Potri.009G138000' => 'ptr', 'Potri.010G094000' => 'ptr', 'Potri.011G053000' => 'ptr', 'Potri.011G119300' => 'ptr', 'Potri.013G113700' => 'ptr', 'Potri.018G107800' => 'ptr', 'Potri.019G084100' => 'ptr', 'Pp3c14_23720' => 'ppa', 'Pp3c16_6340' => 'ppa', 'Pp3c23_13420' => 'ppa', 'Pp3c24_2740' => 'ppa', 'Pp3c25_860' => 'ppa', 'Pp3c8_21750' => 'ppa', 'Prupe.1G273000' => 'ppe', 'Prupe.1G273700' => 'ppe', 'Prupe.1G274100' => 'ppe', 'Prupe.2G023300' => 'ppe', 'Prupe.4G048000' => 'ppe', 'Prupe.4G080400' => 'ppe', 'Prupe.4G181200' => 'ppe', 'Prupe.8G056900' => 'ppe', 'Prupe.8G168700' => 'ppe', 'Psat1g189080' => 'psa', 'Psat1g204760' => 'psa', 'Psat4g175560' => 'psa', 'Psat4g177720' => 'psa', 'Psat5g244240' => 'psa', 'Psat6g010720' => 'psa', 'Psat6g187200' => 'psa', 'Psat7g072040' => 'psa', 'PSO017G3501' => 'pso', 'PSO063G2148' => 'pso', 'PSO063G5608' => 'pso', 'PSO210G6392' => 'pso', 'PSO541G2319' => 'pso', 'PSO541G2836' => 'pso', 'PSO541G4012' => 'pso', 'PSO541G6253' => 'pso', 'PSO675G0580' => 'pso', 'PSO675G0856' => 'pso', 'PSO675G5635' => 'pso', 'PSO675G9157' => 'pso', 'PSO832G1660' => 'pso', 'PSO832G1969' => 'pso', 'QL02p007186' => 'qlo', 'QL02p033904' => 'qlo', 'QL03p064391' => 'qlo', 'QL05p040593' => 'qlo', 'QL05p058242' => 'qlo', 'QL08p021825' => 'qlo', 'QL11p004981' => 'qlo', 'RcHm_v2.0_Chr1g0318301' => 'rch', 'RcHm_v2.0_Chr4g0418501' => 'rch', 'RcHm_v2.0_Chr4g0439971' => 'rch', 'RcHm_v2.0_Chr5g0008541' => 'rch', 'RcHm_v2.0_Chr5g0014101' => 'rch', 'RcHm_v2.0_Chr5g0014131' => 'rch', 'RcHm_v2.0_Chr5g0033621' => 'rch', 'RcHm_v2.0_Chr6g0272041' => 'rch', 'RcHm_v2.0_Chr6g0278831' => 'rch', 'Rhsim02G0130400' => 'rsi', 'Rhsim02G0171100' => 'rsi', 'Rhsim05G0053000' => 'rsi', 'Rhsim05G0053100' => 'rsi', 'Rhsim06G0096500' => 'rsi', 'Rhsim06G0096600' => 'rsi', 'Rhsim06G0199100' => 'rsi', 'Rhsim12G0062300' => 'rsi', 'Rhsim12G0062800' => 'rsi', 'Sabra02G0118600' => 'sbr', 'Sabra04G0027300' => 'sbr', 'Sabra04G0119500' => 'sbr', 'Sabra08G0112500' => 'sbr', 'Sabra11G0036800' => 'sbr', 'Sabra11G0103800' => 'sbr', 'Sabra13G0096300' => 'sbr', 'Sabra16G0262300' => 'sbr', 'Sabra18G0091700' => 'sbr', 'Sabra19G0095400' => 'sbr', 'SalBow6G3080' => 'sbo', 'SalBow7G1157' => 'sbo', 'SalBow7G2123' => 'sbo', 'SalBow7G2285' => 'sbo', 'SalBow7G3537' => 'sbo', 'SalBow8G2947' => 'sbo', 'SalBow8G4463' => 'sbo', 'SalBow8G5466' => 'sbo', 'Sc01g0001750' => 'sci', 'Sc02g0006640' => 'sci', 'Sc02g0006670' => 'sci', 'Sc04g0008220' => 'sci', 'Sc05g0006190' => 'sci', 'Sc08g0002760' => 'sci', 'Sc17g0006170' => 'sci', 'Sc22g0002050' => 'sci', 'Sc23g0001190' => 'sci', 'Sc24g0000980' => 'sci', 'Sed0006245' => 'sed', 'Sed0007543' => 'sed', 'Sed0009411' => 'sed', 'Sed0010765' => 'sed', 'Sed0012944' => 'sed', 'Sed0014682' => 'sed', 'Sed0016174' => 'sed', 'Sed0016796' => 'sed', 'Sed0020317' => 'sed', 'Sed0021467' => 'sed', 'SEGI_01316' => 'sgi', 'SEGI_03374' => 'sgi', 'SEGI_16265' => 'sgi', 'SEGI_18569' => 'sgi', 'SEGI_20351' => 'sgi', 'SEGI_26395' => 'sgi', 'SEGI_29469' => 'sgi', 'SEGI_34771' => 'sgi', 'SEGI_36769' => 'sgi', 'SEGI_37139' => 'sgi', 'SGA_v2.0_scaffold100G29687' => 'sas', 'SGA_v2.0_scaffold118G32472' => 'sas', 'SGA_v2.0_scaffold14G07051' => 'sas', 'SGA_v2.0_scaffold183G39845' => 'sas', 'SGA_v2.0_scaffold1G00174' => 'sas', 'SGA_v2.0_scaffold22G09714' => 'sas', 'SGA_v2.0_scaffold333G48992' => 'sas', 'SGA_v2.0_scaffold46G17491' => 'sas', 'SGA_v2.0_scaffold49G18294' => 'sas', 'SGA_v2.0_scaffold63G21658' => 'sas', 'SHI01741' => 'shi', 'SHI05771' => 'shi', 'SHI18077' => 'shi', 'SHI20525' => 'shi', 'SHI20527' => 'shi', 'SHI20528' => 'shi', 'SMO172G0185' => 'smo', 'SMO198G0020' => 'smo', 'SMO351G0006' => 'smo', 'SMO356G0118' => 'smo', 'SMO358G0296' => 'smo', 'SMO367G0079' => 'smo', 'SMO367G1277' => 'smo', 'Solyc01g014220.3' => 'sly', 'Solyc01g111770.2' => 'sly', 'Solyc02g078180.3' => 'sly', 'Solyc03g006430.3' => 'sly', 'Solyc03g006456.1' => 'sly', 'Solyc03g079860.2' => 'sly', 'Solyc04g079770.3' => 'sly', 'Solyc05g007430.4' => 'sly', 'Solyc07g063150.3' => 'sly', 'Solyc08g016620.3' => 'sly', 'Solyc09g057590.3' => 'sly', 'Solyc09g057600.1' => 'sly', 'Solyc10g009050.3' => 'sly', 'Solyc11g017420.2' => 'sly', 'Sopen01g053810' => 'spe', 'Sopen02g023040' => 'spe', 'Sopen03g002440' => 'spe', 'Sopen04g033350' => 'spe', 'Sopen05g003310' => 'spe', 'Sopen07g004050' => 'spe', 'Sopen07g031340' => 'spe', 'Sopen08g006990' => 'spe', 'Sopen10g004830' => 'spe', 'Sopen11g009370' => 'spe', 'Sp1g24450' => 'spa', 'Sp1g29670' => 'spa', 'Sp1g39600' => 'spa', 'Sp2g11080' => 'spa', 'Sp2g13970' => 'spa', 'Sp4g16130' => 'spa', 'Sp6g13080' => 'spa', 'Sp7g37270' => 'spa', 'TAR371G0065' => 'tar', 'TAR376G0340' => 'tar', 'TAR376G0435' => 'tar', 'TAR381G0002' => 'tar', 'TAR381G1236' => 'tar', 'TAR624G0055' => 'tar', 'TAR624G0324' => 'tar', 'TAR624G0696' => 'tar', 'TAR624G0906' => 'tar', 'TAR625G0107' => 'tar', 'TAR626G0015' => 'tar', 'TAR626G1356' => 'tar', 'TAR627G0888' => 'tar', 'TAR628G0399' => 'tar', 'TAR628G1327' => 'tar', 'TAR629G2831' => 'tar', 'TAR629G2874' => 'tar', 'TAR633G1432' => 'tar', 'TAR633G2771' => 'tar', 'THA.LOC104803394' => 'tha', 'THA.LOC104805153' => 'tha', 'THA.LOC104806784' => 'tha', 'THA.LOC104810473' => 'tha', 'THA.LOC104813100' => 'tha', 'THA.LOC104814215' => 'tha', 'THA.LOC104815554' => 'tha', 'THA.LOC104820544' => 'tha', 'THA.LOC104824754' => 'tha', 'THA.LOC104827717' => 'tha', 'Thecc.02G031400' => 'tca', 'Thecc.02G055900' => 'tca', 'Thecc.02G350800' => 'tca', 'Thecc.06G150900' => 'tca', 'Thecc.06G186600' => 'tca', 'Thecc.07G089600' => 'tca', 'Thecc.08G020400' => 'tca', 'Thecc.08G182100' => 'tca', 'Thhalv10000873m.g' => 'esa', 'Thhalv10004185m.g' => 'esa', 'Thhalv10006981m.g' => 'esa', 'Thhalv10007204m.g' => 'esa', 'Thhalv10011374m.g' => 'esa', 'Thhalv10013482m.g' => 'esa', 'Thhalv10017801m.g' => 'esa', 'Thhalv10024983m.g' => 'esa', 'TPR.G12072' => 'tpr', 'TPR.G15769' => 'tpr', 'TPR.G16504' => 'tpr', 'TPR.G16506' => 'tpr', 'TPR.G24345' => 'tpr', 'TPR.G26666' => 'tpr', 'TPR.G27320' => 'tpr', 'TPR.G31819' => 'tpr', 'TPR.G38879' => 'tpr', 'TPR.G39015' => 'tpr', 'TPR.G8819' => 'tpr', 'TWI09G0924' => 'twi', 'TWI12G0811' => 'twi', 'TWI12G1294' => 'twi', 'TWI31G0150' => 'twi', 'TWI36G1262' => 'twi', 'TWI38G1287' => 'twi', 'TWI38G1633' => 'twi', 'TWI38G1982' => 'twi', 'TWI39G0116' => 'twi', 'TWI60G1011' => 'twi', 'TWI63G0171' => 'twi', 'TWI73G0839' => 'twi', 'TWI79G1511' => 'twi', 'unitig_0.g915' => 'ugi', 'unitig_0.g916' => 'ugi', 'unitig_21.g20219' => 'ugi', 'unitig_21.g20416' => 'ugi', 'unitig_578.g16132' => 'ugi', 'unitig_578.g16718' => 'ugi', 'unitig_62.g23481' => 'ugi', 'unitig_744.g24535' => 'ugi', 'unitig_749.g13525' => 'ugi', 'vmacro01248' => 'vma', 'vmacro02290' => 'vma', 'vmacro10946' => 'vma', 'vmacro11865' => 'vma', 'vmacro12493' => 'vma', 'vmacro17322' => 'vma', 'vmacro21599' => 'vma', 'vmacro23041' => 'vma', 'VMungo0251G0004' => 'vmu', 'VMungo0251G2639' => 'vmu', 'VMungo0251G2967' => 'vmu', 'VMungo0540G0864' => 'vmu', 'VMungo0540G1569' => 'vmu', 'VMungo0647G0317' => 'vmu', 'VMungo0720G1373' => 'vmu', 'VMungo0720G1508' => 'vmu', 'VMungo1080G0485' => 'vmu', 'VMungo1215G3177' => 'vmu', 'Zm00001eb112600' => 'zma', 'Zm00001eb120220' => 'zma', 'Zm00001eb153240' => 'zma', 'Zm00001eb168880' => 'zma', 'Zm00001eb213920' => 'zma', 'Zm00001eb228280' => 'zma', 'Zm00001eb254580' => 'zma', 'Zm00001eb272180' => 'zma', 'Zm00001eb293190' => 'zma', 'Zm00001eb322930' => 'zma', 'Zm00001eb353360' => 'zma', 'Zm00001eb353390' => 'zma', 'Zm00001eb353430' => 'zma', 'Zm00001eb353440' => 'zma', 'Zm00001eb353780' => 'zma' ), 'gf_id' => 'HOM05D000499', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000499' ), 'data_identifier' => 'HOM05D000499', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000499', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1066', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p29780' => 'bna', 'A02p33180' => 'bna', 'A03p16470' => 'bna', 'A03p66010' => 'bna', 'A04p25970' => 'bna', 'A06p01270' => 'bna', 'A06p46080' => 'bna', 'A07p11400' => 'bna', 'A08p01840' => 'bna', 'A08p08230' => 'bna', 'A08p25740' => 'bna', 'A09p32070' => 'bna', 'A09p37830' => 'bna', 'A09p42840' => 'bna', 'A09p42850' => 'bna', 'Aa31LG10G2060' => 'aar', 'Aa31LG2G7410' => 'aar', 'Aa31LG6G10200' => 'aar', 'Aa31LG6G16680' => 'aar', 'Aa31LG6G8470' => 'aar', 'Aa31LG9G12730' => 'aar', 'Aa31LG9G13680' => 'aar', 'Aa31LG9G14920' => 'aar', 'Aa31LG9G6650' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4977' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5467' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3254' => 'aag', 'Actinidia02578' => 'ach', 'Actinidia07693' => 'ach', 'Actinidia08413' => 'ach', 'Actinidia08414' => 'ach', 'Actinidia15289' => 'ach', 'Actinidia19871' => 'ach', 'Actinidia21475' => 'ach', 'Actinidia22576' => 'ach', 'Actinidia28327' => 'ach', 'Actinidia32491' => 'ach', 'Actinidia39463' => 'ach', 'Actinidia39571' => 'ach', 'Ah.01g013750' => 'amhyb', 'Ah.01g023210' => 'amhyb', 'Ah.04g164850' => 'amhyb', 'Ah.05g178060' => 'amhyb', 'Ah.07g204270' => 'amhyb', 'Ah.07g208480' => 'amhyb', 'Ah.09g237410' => 'amhyb', 'Ah.14g089460' => 'amhyb', 'AL1G41790' => 'aly', 'AL1G49050' => 'aly', 'AL1G53810' => 'aly', 'AL1G61400' => 'aly', 'AL4G18580' => 'aly', 'AL5G12510' => 'aly', 'AL5G12540' => 'aly', 'AL6G43230' => 'aly', 'AL7G10370' => 'aly', 'AL7G19250' => 'aly', 'AL8G12240' => 'aly', 'AL8G18540' => 'aly', 'Aqoxy1G02409' => 'aox', 'Aqoxy2G03993' => 'aox', 'Aqoxy3G03357' => 'aox', 'Aqoxy4G00785' => 'aox', 'Aqoxy5G02598' => 'aox', 'Aqoxy6G00132' => 'aox', 'Aqoxy7G01776' => 'aox', 'Aqoxy7G02316' => 'aox', 'Aqoxy7G03973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.12AFKW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B8730' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27IQR1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3F75VG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3RE0GA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41TCQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.527VTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FIR39' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5W8UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DA38EV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ63HS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H1I32C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HC27T5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4M8AP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7N3CZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9UVDZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LS1NQA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT1D4B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SKC4TM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCFV76' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF9Q1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQWD9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1ZM88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WE07RT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YCK7VH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJE6Q6' => 'arhy', 'AT1G28240' => 'ath', 'AT1G34550' => 'ath', 'AT1G53040' => 'ath', 'AT2G02910' => 'ath', 'AT4G09630' => 'ath', 'AT4G38500' => 'ath', 'AT5G42660' => 'ath', 'AT5G46220' => 'ath', 'ATR0152G026' => 'atr', 'ATR0564G343' => 'atr', 'ATR0706G151' => 'atr', 'ATR0733G207' => 'atr', 'ATR0751G234' => 'atr', 'ATR0807G048' => 'atr', 'ATR1091G084' => 'atr', 'Atru.chr10.1229' => 'acertr', 'Atru.chr10.1230' => 'acertr', 'Atru.chr10.1874' => 'acertr', 'Atru.chr11.1808' => 'acertr', 'Atru.chr13.1795' => 'acertr', 'Atru.chr13.570' => 'acertr', 'Atru.chr2.2608' => 'acertr', 'Atru.chr2.2609' => 'acertr', 'Atru.chr5.3428' => 'acertr', 'Atru.chr8.1171' => 'acertr', 'AUR62004651' => 'cqu', 'AUR62008675' => 'cqu', 'AUR62010014' => 'cqu', 'AUR62013004' => 'cqu', 'AUR62014825' => 'cqu', 'AUR62015015' => 'cqu', 'AUR62015151' => 'cqu', 'AUR62017020' => 'cqu', 'AUR62019422' => 'cqu', 'AUR62023570' => 'cqu', 'AUR62025571' => 'cqu', 'AUR62029098' => 'cqu', 'AUR62033863' => 'cqu', 'AUR62034296' => 'cqu', 'AUR62040075' => 'cqu', 'BcaB02g07334' => 'bca', 'BcaB02g10575' => 'bca', 'BcaB03g12119' => 'bca', 'BcaB03g12120' => 'bca', 'BcaB03g13945' => 'bca', 'BcaB04g17123' => 'bca', 'BcaB04g17867' => 'bca', 'BcaB04g19839' => 'bca', 'BcaB07g30317' => 'bca', 'BcaB07g32432' => 'bca', 'BcaB07g33362' => 'bca', 'BcaB08g36611' => 'bca', 'BcaC01g00028' => 'bca', 'BcaC01g01356' => 'bca', 'BcaC01g02034' => 'bca', 'BcaC01g06051' => 'bca', 'BcaC03g16839' => 'bca', 'BcaC03g17176' => 'bca', 'BcaC05g26829' => 'bca', 'BcaC06g31490' => 'bca', 'BcaC06g35344' => 'bca', 'BcaC06g36570' => 'bca', 'BcaC07g37537' => 'bca', 'BcaC08g43491' => 'bca', 'BcaC08g43773' => 'bca', 'BcaNung00234' => 'bca', 'BcaNung01982' => 'bca', 'BcaNung03707' => 'bca', 'BcaNung06454' => 'bca', 'BolC2t10762H' => 'bol', 'BolC2t11191H' => 'bol', 'BolC3t14322H' => 'bol', 'BolC3t19747H' => 'bol', 'BolC3t21425H' => 'bol', 'BolC4t27800H' => 'bol', 'BolC5t31423H' => 'bol', 'BolC6t35951H' => 'bol', 'BolC6t36282H' => 'bol', 'BolC7t40678H' => 'bol', 'BolC7t40679H' => 'bol', 'BolC7t42222H' => 'bol', 'BolC7t43492H' => 'bol', 'BolC7t46785H' => 'bol', 'BolC8t47853H' => 'bol', 'BolC9t56805H' => 'bol', 'BraA02t08000Z' => 'bra', 'BraA02t08341Z' => 'bra', 'BraA03t10936Z' => 'bra', 'BraA03t15657Z' => 'bra', 'BraA04t18100Z' => 'bra', 'BraA05t20523Z' => 'bra', 'BraA06t23353Z' => 'bra', 'BraA06t27473Z' => 'bra', 'BraA06t27769Z' => 'bra', 'BraA07t28928Z' => 'bra', 'BraA08t32236Z' => 'bra', 'BraA08t32841Z' => 'bra', 'BraA08t34524Z' => 'bra', 'BraA09t38742Z' => 'bra', 'BraA09t39295Z' => 'bra', 'C02p47180' => 'bna', 'C02p50990' => 'bna', 'C03p19360' => 'bna', 'C03p74950' => 'bna', 'C03p91000' => 'bna', 'C04p63260' => 'bna', 'C05p27050' => 'bna', 'C06p08750' => 'bna', 'C06p11490' => 'bna', 'C07p02820' => 'bna', 'C07p17180' => 'bna', 'C07p29440' => 'bna', 'C07p63730' => 'bna', 'C09p39260' => 'bna', 'CAN.G1164.34' => 'can', 'CAN.G1164.39' => 'can', 'CAN.G1530.3' => 'can', 'CAN.G162.61' => 'can', 'CAN.G176.6' => 'can', 'CAN.G289.49' => 'can', 'CAN.G370.21' => 'can', 'CAN.G370.22' => 'can', 'CAN.G371.117' => 'can', 'CAN.G58.37' => 'can', 'CAN.G588.98' => 'can', 'CANSAT21G2266' => 'cansat', 'CANSAT25G2799' => 'cansat', 'CANSAT35G0862' => 'cansat', 'CANSAT35G1704' => 'cansat', 'CANSAT35G1760' => 'cansat', 'CANSAT56G3971' => 'cansat', 'CANSAT56G4116' => 'cansat', 'CANSAT80G1259' => 'cansat', 'CARHR027730' => 'chi', 'CARHR033880' => 'chi', 'CARHR043270' => 'chi', 'CARHR145330' => 'chi', 'CARHR145340' => 'chi', 'CARHR175570' => 'chi', 'CARHR181570' => 'chi', 'CARHR258470' => 'chi', 'CARHR260490' => 'chi', 'CARHR294220' => 'chi', 'Carub.0001s2668' => 'cru', 'Carub.0001s3257' => 'cru', 'Carub.0001s4220' => 'cru', 'Carub.0005s0179' => 'cru', 'Carub.0006s2807' => 'cru', 'Carub.0007s0039' => 'cru', 'Carub.0008s0169' => 'cru', 'Carub.0008s0636' => 'cru', 'Ca_00338_v3' => 'car', 'Ca_00542_v3' => 'car', 'Ca_01844_v3' => 'car', 'Ca_10611_v3' => 'car', 'Ca_13326_v3' => 'car', 'Ca_17944_v3' => 'car', 'Ca_18546_v3' => 'car', 'Ca_24219_v3' => 'car', 'Ca_29972_v3' => 'car', 'CBR_g3681' => 'cbr', 'CBR_g40021' => 'cbr', 'Cc01_g08140' => 'ccan', 'Cc02_g13410' => 'ccan', 'Cc02_g37480' => 'ccan', 'Cc05_g12030' => 'ccan', 'Cc09_g03370' => 'ccan', 'Cc09_g10300' => 'ccan', 'Cc10_g03530' => 'ccan', 'Cc10_g11380' => 'ccan', 'CDE01G0176' => 'cde', 'CDE02G0675' => 'cde', 'CDE02G0942' => 'cde', 'CDE02G1153' => 'cde', 'CDE02G4177' => 'cde', 'CDE04G2117' => 'cde', 'CDE04G2736' => 'cde', 'CDE08G1161' => 'cde', 'CDE09G1238' => 'cde', 'Cfa000467' => 'cfa', 'Cfa000947' => 'cfa', 'Cfa004969' => 'cfa', 'Cfa005284' => 'cfa', 'Cfa008993' => 'cfa', 'Cfa018187' => 'cfa', 'Cfa018454' => 'cfa', 'Cfa020585' => 'cfa', 'Ciclev10000424m.g' => 'ccl', 'Ciclev10003605m.g' => 'ccl', 'Ciclev10007828m.g' => 'ccl', 'Ciclev10014620m.g' => 'ccl', 'Ciclev10015169m.g' => 'ccl', 'Ciclev10018291m.g' => 'ccl', 'Ciclev10028256m.g' => 'ccl', 'Ciclev10033822m.g' => 'ccl', 'CiPaw.05G060300' => 'cil', 'CiPaw.05G085000' => 'cil', 'CiPaw.06G083700' => 'cil', 'CiPaw.06G120300' => 'cil', 'CiPaw.09G060500' => 'cil', 'CiPaw.09G123800' => 'cil', 'CiPaw.11G169700' => 'cil', 'CiPaw.12G118300' => 'cil', 'CiPaw.15G071000' => 'cil', 'CiPaw.15G081900' => 'cil', 'ClCG01G024610' => 'cla', 'ClCG03G006070' => 'cla', 'ClCG05G019250' => 'cla', 'ClCG09G009500' => 'cla', 'ClCG11G008200' => 'cla', 'ClCG11G018080' => 'cla', 'COL.COLO4_17373' => 'col', 'COL.COLO4_22994' => 'col', 'COL.COLO4_26389' => 'col', 'COL.COLO4_27170' => 'col', 'COL.COLO4_31074' => 'col', 'COL.COLO4_31465' => 'col', 'COL.COLO4_36438' => 'col', 'COL.COLO4_36439' => 'col', 'Cpa.g.c38781' => 'cpa', 'Cpa.g.sc128.12' => 'cpa', 'Cpa.g.sc166.7' => 'cpa', 'Cpa.g.sc166.8' => 'cpa', 'Cpa.g.sc20.111' => 'cpa', 'Cpa.g.sc27.31' => 'cpa', 'Cpa.g.sc64.36' => 'cpa', 'Cpa.g.sc64.37' => 'cpa', 'Cpa.g.sc66.49' => 'cpa', 'Cpa.g.sc80.64' => 'cpa', 'CsaV3_1G012320' => 'csa', 'CsaV3_2G008480' => 'csa', 'CsaV3_2G033450' => 'csa', 'CsaV3_3G044830' => 'csa', 'CsaV3_4G033710' => 'csa', 'CsaV3_6G051730' => 'csa', 'CsaV3_7G025350' => 'csa', 'CSS0001067' => 'camsi', 'CSS0005996' => 'camsi', 'CSS0006590' => 'camsi', 'CSS0009673' => 'camsi', 'CSS0010201' => 'camsi', 'CSS0010549' => 'camsi', 'CSS0011364' => 'camsi', 'CSS0014473' => 'camsi', 'CSS0014961' => 'camsi', 'CSS0020191' => 'camsi', 'CSS0021165' => 'camsi', 'CSS0022306' => 'camsi', 'CSS0030591' => 'camsi', 'CSS0030696' => 'camsi', 'CSS0032653' => 'camsi', 'CSS0037487' => 'camsi', 'CSS0041102' => 'camsi', 'CSS0041261' => 'camsi', 'CSS0046246' => 'camsi', 'CSS0049256' => 'camsi', 'DCAR_004075' => 'dca', 'DCAR_011538' => 'dca', 'DCAR_019553' => 'dca', 'DCAR_020952' => 'dca', 'DCAR_021739' => 'dca', 'DCAR_027407' => 'dca', 'DCAR_027913' => 'dca', 'DCAR_028066' => 'dca', 'Dinv05899' => 'din', 'Dinv07563' => 'din', 'Dinv08010' => 'din', 'Dinv14125' => 'din', 'Dinv20172' => 'din', 'Dinv30743' => 'din', 'Dinv31229' => 'din', 'Dinv34162' => 'din', 'Dinv36028' => 'din', 'Dinv39368' => 'din', 'Dinv40565' => 'din', 'Dinv41706' => 'din', 'Duzib052G0089' => 'dzi', 'Duzib116G0641' => 'dzi', 'Duzib132G0069' => 'dzi', 'Duzib132G1219' => 'dzi', 'Duzib147G0278' => 'dzi', 'Duzib160G0480' => 'dzi', 'Duzib170G0661' => 'dzi', 'Duzib177G0591' => 'dzi', 'Duzib187G1353' => 'dzi', 'Duzib192G0858' => 'dzi', 'Duzib192G0883' => 'dzi', 'Duzib213G0506' => 'dzi', 'Duzib235G0289' => 'dzi', 'Duzib251G0422' => 'dzi', 'ECA232G3898' => 'eca', 'ECA233G5950' => 'eca', 'ECA234G1699' => 'eca', 'ECA234G2421' => 'eca', 'ECA236G0426' => 'eca', 'ECA236G4331' => 'eca', 'ECA248G2573' => 'eca', 'EL10Ac1g00077' => 'bvu', 'EL10Ac1g01746' => 'bvu', 'EL10Ac2g03464' => 'bvu', 'EL10Ac4g08176' => 'bvu', 'EL10Ac7g17521' => 'bvu', 'EL10Ac8g20386' => 'bvu', 'EL10Ac9g21343' => 'bvu', 'EL10Ac9g22688' => 'bvu', 'Eucgr.B03434' => 'egr', 'Eucgr.D00618' => 'egr', 'Eucgr.E02395' => 'egr', 'Eucgr.F01129' => 'egr', 'Eucgr.F02622' => 'egr', 'Eucgr.F04207' => 'egr', 'FAN01G0570' => 'fan', 'FAN03G3351' => 'fan', 'FAN06G3702' => 'fan', 'FAN07G2149' => 'fan', 'FAN10G3758' => 'fan', 'FAN11G1170' => 'fan', 'FAN11G2050' => 'fan', 'FAN11G2724' => 'fan', 'FAN12G1700' => 'fan', 'FAN12G2028' => 'fan', 'FAN15G1160' => 'fan', 'FAN15G3063' => 'fan', 'FAN16G2540' => 'fan', 'FAN16G3077' => 'fan', 'FAN16G3624' => 'fan', 'FAN17G0221' => 'fan', 'FAN20G2492' => 'fan', 'FAN20G2905' => 'fan', 'FAN21G0548' => 'fan', 'FAN21G1300' => 'fan', 'FAN22G0077' => 'fan', 'FAN22G1315' => 'fan', 'FAN24G1280' => 'fan', 'FAN24G1445' => 'fan', 'FAN24G3527' => 'fan', 'FAN25G0464' => 'fan', 'FAN25G2885' => 'fan', 'FAN25G3270' => 'fan', 'FAN27G1101' => 'fan', 'FAN27G2846' => 'fan', 'FAN27G3524' => 'fan', 'FvH4_2g11770' => 'fve', 'FvH4_2g15630' => 'fve', 'FvH4_3g05570' => 'fve', 'FvH4_3g09110' => 'fve', 'FvH4_3g19940' => 'fve', 'FvH4_4g04821' => 'fve', 'FvH4_4g31480' => 'fve', 'FvH4_7g01740' => 'fve', 'Glyma.05G130400' => 'gma', 'Glyma.05G156400' => 'gma', 'Glyma.07G197000' => 'gma', 'Glyma.08G085151' => 'gma', 'Glyma.08G114500' => 'gma', 'Glyma.08G300400' => 'gma', 'Glyma.10G215800' => 'gma', 'Glyma.12G224400' => 'gma', 'Glyma.13G179300' => 'gma', 'Glyma.13G218151' => 'gma', 'Glyma.13G238800' => 'gma', 'Glyma.13G276900' => 'gma', 'Glyma.14G078200' => 'gma', 'Glyma.15G074500' => 'gma', 'Glyma.15G094100' => 'gma', 'Glyma.17G247200' => 'gma', 'Glyma.18G120100' => 'gma', 'Glyma.20G176000' => 'gma', 'Gohir.A01G063600' => 'ghi', 'Gohir.A01G170301' => 'ghi', 'Gohir.A02G060500' => 'ghi', 'Gohir.A05G133850' => 'ghi', 'Gohir.A05G161400' => 'ghi', 'Gohir.A06G012900' => 'ghi', 'Gohir.A06G035901' => 'ghi', 'Gohir.A06G127100' => 'ghi', 'Gohir.A06G210500' => 'ghi', 'Gohir.A08G008650' => 'ghi', 'Gohir.A09G072700' => 'ghi', 'Gohir.A09G088301' => 'ghi', 'Gohir.A10G040600' => 'ghi', 'Gohir.A12G036300' => 'ghi', 'Gohir.A12G143350' => 'ghi', 'Gohir.A12G165500' => 'ghi', 'Gohir.A13G145700' => 'ghi', 'Gohir.D01G050000' => 'ghi', 'Gohir.D01G051366' => 'ghi', 'Gohir.D01G161350' => 'ghi', 'Gohir.D02G065900' => 'ghi', 'Gohir.D05G164200' => 'ghi', 'Gohir.D05G355500' => 'ghi', 'Gohir.D06G010400' => 'ghi', 'Gohir.D06G111250' => 'ghi', 'Gohir.D06G132000' => 'ghi', 'Gohir.D06G210500' => 'ghi', 'Gohir.D07G165675' => 'ghi', 'Gohir.D08G062240' => 'ghi', 'Gohir.D08G086101' => 'ghi', 'Gohir.D08G138060' => 'ghi', 'Gohir.D09G072300' => 'ghi', 'Gohir.D10G041400' => 'ghi', 'Gohir.D11G191020' => 'ghi', 'Gohir.D11G212066' => 'ghi', 'Gohir.D12G036300' => 'ghi', 'Gohir.D12G168600' => 'ghi', 'Gohir.D13G150600' => 'ghi', 'Gorai.001G057300' => 'gra', 'Gorai.002G069900' => 'gra', 'Gorai.002G200000' => 'gra', 'Gorai.003G067600' => 'gra', 'Gorai.005G074800' => 'gra', 'Gorai.006G087300' => 'gra', 'Gorai.008G037500' => 'gra', 'Gorai.008G181400' => 'gra', 'Gorai.009G169400' => 'gra', 'Gorai.009G387900' => 'gra', 'Gorai.010G013300' => 'gra', 'Gorai.010G153800' => 'gra', 'Gorai.010G255800' => 'gra', 'Gorai.011G043700' => 'gra', 'Gorai.011G198900' => 'gra', 'Gorai.013G168400' => 'gra', 'GSVIVG01005212001' => 'vvi', 'GSVIVG01006163001' => 'vvi', 'GSVIVG01009625001' => 'vvi', 'GSVIVG01014338001' => 'vvi', 'GSVIVG01020005001' => 'vvi', 'GSVIVG01021450001' => 'vvi', 'GSVIVG01023975001' => 'vvi', 'GSVIVG01034490001' => 'vvi', 'HanXRQChr04g0112071' => 'han', 'HanXRQChr05g0131151' => 'han', 'HanXRQChr09g0262371' => 'han', 'HanXRQChr09g0268401' => 'han', 'HanXRQChr10g0279241' => 'han', 'HanXRQChr10g0297961' => 'han', 'HanXRQChr11g0326231' => 'han', 'HanXRQChr11g0328471' => 'han', 'HanXRQChr16g0507941' => 'han', 'HanXRQChr17g0560211' => 'han', 'Haze_02108' => 'cav', 'Haze_02428' => 'cav', 'Haze_05593' => 'cav', 'Haze_06448' => 'cav', 'Haze_09427' => 'cav', 'Haze_12022' => 'cav', 'Haze_17612' => 'cav', 'Haze_17928' => 'cav', 'Hma1.2p1_0032F.1_g019250' => 'hma', 'Hma1.2p1_0163F.1_g072690' => 'hma', 'Hma1.2p1_0265F.1_g106710' => 'hma', 'Hma1.2p1_0286F.1_g113970' => 'hma', 'Hma1.2p1_0363F.1_g136640' => 'hma', 'Hma1.2p1_0584F.1_g183470' => 'hma', 'Hma1.2p1_0885F.1_g232570' => 'hma', 'HPP92_006022' => 'vpl', 'HPP92_007320' => 'vpl', 'HPP92_011521' => 'vpl', 'HPP92_019387' => 'vpl', 'HPP92_024038' => 'vpl', 'Hund05891' => 'sun', 'Hund06450' => 'sun', 'Hund12053' => 'sun', 'Hund16800' => 'sun', 'Hund21222' => 'sun', 'Hund22896' => 'sun', 'Hund23746' => 'sun', 'Hund27083' => 'sun', 'Lalb_Chr02g0141831' => 'lal', 'Lalb_Chr02g0141841' => 'lal', 'Lalb_Chr05g0220411' => 'lal', 'Lalb_Chr06g0162081' => 'lal', 'Lalb_Chr09g0327651' => 'lal', 'Lalb_Chr13g0295051' => 'lal', 'Lalb_Chr15g0086801' => 'lal', 'Lalb_Chr16g0383781' => 'lal', 'Lalb_Chr16g0383791' => 'lal', 'Lalb_Chr18g0055441' => 'lal', 'Lalb_Chr18g0059611' => 'lal', 'Lalb_Chr20g0109661' => 'lal', 'Lalb_Chr20g0109831' => 'lal', 'Lalb_Chr20g0121871' => 'lal', 'Lalb_Chr22g0355361' => 'lal', 'Lalb_Chr25g0286371' => 'lal', 'Lj1A1187G43' => 'lonja', 'Lj1A1205T50' => 'lonja', 'Lj1A800G33' => 'lonja', 'Lj1C1187T7' => 'lonja', 'Lj1C843T11' => 'lonja', 'Lj1g0010940' => 'lja', 'Lj2A288T69' => 'lonja', 'Lj3g0024276' => 'lja', 'Lj4A47T76' => 'lonja', 'Lj4g0005805' => 'lja', 'Lj4g0006097' => 'lja', 'Lj4g0008528' => 'lja', 'Lj4g0024907' => 'lja', 'Lj5g0012472' => 'lja', 'Lj5g0018648' => 'lja', 'Lj6C789G1' => 'lonja', 'Lj6g0004000' => 'lja', 'Lj7A292G67' => 'lonja', 'Lj7A292T64' => 'lonja', 'Lj9A400T58' => 'lonja', 'Lsat_1_v5_gn_1_126181' => 'lsa', 'Lsat_1_v5_gn_4_123041' => 'lsa', 'Lsat_1_v5_gn_4_133620' => 'lsa', 'Lsat_1_v5_gn_4_53221' => 'lsa', 'Lsat_1_v5_gn_4_71961' => 'lsa', 'Lsat_1_v5_gn_7_105241' => 'lsa', 'Lsat_1_v5_gn_7_21361' => 'lsa', 'Lsat_1_v5_gn_7_28860' => 'lsa', 'Lsat_1_v5_gn_7_31260' => 'lsa', 'Lsat_1_v5_gn_8_52801' => 'lsa', 'Manes.02G191400' => 'mes', 'Manes.03G110100' => 'mes', 'Manes.04G071100' => 'mes', 'Manes.05G100500' => 'mes', 'Manes.05G164700' => 'mes', 'Manes.15G087000' => 'mes', 'Manes.15G121500' => 'mes', 'Manes.16G028300' => 'mes', 'Manes.17G046100' => 'mes', 'Manes.17G069800' => 'mes', 'Manes.18G100500' => 'mes', 'Mapoly0002s0109' => 'mpo', 'Mapoly0024s0007' => 'mpo', 'Mapoly0089s0032' => 'mpo', 'MBI04_g42241_MAGBIO' => 'mbi', 'MBI05_g11988_MAGBIO' => 'mbi', 'MBI05_g35452_MAGBIO' => 'mbi', 'MBI07_g30179_MAGBIO' => 'mbi', 'MBI07_g35859_MAGBIO' => 'mbi', 'MBI07_g35860_MAGBIO' => 'mbi', 'MBI07_g37166_MAGBIO' => 'mbi', 'MBI08_g18172_MAGBIO' => 'mbi', 'MBI09_g08441_MAGBIO' => 'mbi', 'MBI13_g01676_MAGBIO' => 'mbi', 'MBI14_g42955_MAGBIO' => 'mbi', 'MBI16_g13161_MAGBIO' => 'mbi', 'MBI17_g27204_MAGBIO' => 'mbi', 'MBI19_g21595_MAGBIO' => 'mbi', 'MD00G1148400' => 'mdo', 'MD02G1301200' => 'mdo', 'MD03G1227800' => 'mdo', 'MD05G1041100' => 'mdo', 'MD05G1124800' => 'mdo', 'MD05G1284000' => 'mdo', 'MD05G1338800' => 'mdo', 'MD05G1338900' => 'mdo', 'MD07G1022800' => 'mdo', 'MD10G1047500' => 'mdo', 'MD10G1127500' => 'mdo', 'MD10G1262300' => 'mdo', 'MD10G1293800' => 'mdo', 'MD16G1074300' => 'mdo', 'Medtr1g021670' => 'mtr', 'Medtr1g096320' => 'mtr', 'Medtr2g013690' => 'mtr', 'Medtr2g019450' => 'mtr', 'Medtr2g085170' => 'mtr', 'Medtr4g088785' => 'mtr', 'Medtr8g055930' => 'mtr', 'Medtr8g085850' => 'mtr', 'MELO3C002605.2' => 'cme', 'MELO3C003891.2' => 'cme', 'MELO3C004012.2' => 'cme', 'MELO3C007134.2' => 'cme', 'MELO3C008118.2' => 'cme', 'MELO3C016700.2' => 'cme', 'MELO3C024127.2' => 'cme', 'MELO3C033361.2' => 'cme', 'MELO3C033362.2' => 'cme', 'Migut.C00430' => 'egut', 'Migut.C01246' => 'egut', 'Migut.E00101' => 'egut', 'Migut.H01486' => 'egut', 'Migut.H01939' => 'egut', 'Migut.K00360' => 'egut', 'Migut.M00910' => 'egut', 'Migut.M01139' => 'egut', 'Migut.N02677' => 'egut', 'MSTRG.13252' => 'ama', 'MSTRG.14701' => 'ama', 'MSTRG.1521' => 'ama', 'MSTRG.15884' => 'ama', 'MSTRG.16242' => 'ama', 'MSTRG.22285' => 'ama', 'MSTRG.22444' => 'ama', 'MSTRG.2349' => 'ama', 'MSTRG.26308' => 'ama', 'MSTRG.28296' => 'ama', 'MSTRG.9895' => 'ama', 'Nitab4.5_0000110g0060' => 'nta', 'Nitab4.5_0000420g0130' => 'nta', 'Nitab4.5_0000422g0030' => 'nta', 'Nitab4.5_0000560g0180' => 'nta', 'Nitab4.5_0000703g0100' => 'nta', 'Nitab4.5_0000786g0200' => 'nta', 'Nitab4.5_0001336g0020' => 'nta', 'Nitab4.5_0001796g0030' => 'nta', 'Nitab4.5_0003348g0060' => 'nta', 'Nitab4.5_0003698g0040' => 'nta', 'Nitab4.5_0003942g0090' => 'nta', 'Nitab4.5_0004775g0070' => 'nta', 'Nitab4.5_0004864g0030' => 'nta', 'Nitab4.5_0005615g0020' => 'nta', 'Nitab4.5_0009288g0030' => 'nta', 'Nitab4.5_0009341g0010' => 'nta', 'Nitab4.5_0009535g0010' => 'nta', 'Nn1g03995' => 'nnu', 'Nn1g04100' => 'nnu', 'Nn1g06530' => 'nnu', 'Nn3g16404' => 'nnu', 'Nn3g17212' => 'nnu', 'Nn3g20776' => 'nnu', 'Nn3g21923' => 'nnu', 'Nn5g27737' => 'nnu', 'Nn5g29461' => 'nnu', 'Nn7g38355' => 'nnu', 'Nn8g39873' => 'nnu', 'Oeu000548.2' => 'oeu', 'Oeu004672.1' => 'oeu', 'Oeu015605.2' => 'oeu', 'Oeu016092.1' => 'oeu', 'Oeu017879.3' => 'oeu', 'Oeu024910.1' => 'oeu', 'Oeu028965.1' => 'oeu', 'Oeu031269.1' => 'oeu', 'Oeu031270.1' => 'oeu', 'Oeu032535.1' => 'oeu', 'Oeu034151.1' => 'oeu', 'Oeu034152.1' => 'oeu', 'Oeu034588.2' => 'oeu', 'Oeu050846.1' => 'oeu', 'Oeu050849.2' => 'oeu', 'Oeu051063.2' => 'oeu', 'Oeu052368.1' => 'oeu', 'Oeu052370.1' => 'oeu', 'Os01g0210400' => 'osa', 'Os01g0304300' => 'osa', 'Os01g0749100' => 'osa', 'Os02g0745800' => 'osa', 'Os03g0769050' => 'osa', 'Os05g0531500' => 'osa', 'Os06g0724300' => 'osa', 'Os11g0198100' => 'osa', 'Peaxi162Scf00069g01425' => 'pax', 'Peaxi162Scf00280g00811' => 'pax', 'Peaxi162Scf00310g00615' => 'pax', 'Peaxi162Scf00362g00542' => 'pax', 'Peaxi162Scf00461g00310' => 'pax', 'Peaxi162Scf00530g00118' => 'pax', 'Peaxi162Scf00541g00057' => 'pax', 'Peaxi162Scf00661g00017' => 'pax', 'Peaxi162Scf00926g00027' => 'pax', 'Peaxi162Scf01064g00263' => 'pax', 'Peaxi162Scf01211g00135' => 'pax', 'PGR004G2336' => 'pgr', 'PGR042G0327' => 'pgr', 'PGR042G1957' => 'pgr', 'PGR042G2003' => 'pgr', 'PGR042G3929' => 'pgr', 'PGR083G1137' => 'pgr', 'PGR083G1364' => 'pgr', 'PGSC0003DMG400003381' => 'stu', 'PGSC0003DMG400003417' => 'stu', 'PGSC0003DMG400008981' => 'stu', 'PGSC0003DMG400012417' => 'stu', 'PGSC0003DMG400012823' => 'stu', 'PGSC0003DMG400016885' => 'stu', 'PGSC0003DMG400022812' => 'stu', 'PGSC0003DMG400029726' => 'stu', 'PGSC0003DMG401009243' => 'stu', 'PGSC0003DMG401031505' => 'stu', 'PGSC0003DMG402031505' => 'stu', 'Phvul.001G017600' => 'pvu', 'Phvul.002G193500' => 'pvu', 'Phvul.002G228900' => 'pvu', 'Phvul.002G236800' => 'pvu', 'Phvul.003G049500' => 'pvu', 'Phvul.005G072000' => 'pvu', 'Phvul.006G164800' => 'pvu', 'Phvul.006G185100' => 'pvu', 'Phvul.007G090000' => 'pvu', 'Potri.001G399800' => 'ptr', 'Potri.002G149900' => 'ptr', 'Potri.004G044100' => 'ptr', 'Potri.004G177600' => 'ptr', 'Potri.009G138000' => 'ptr', 'Potri.010G094000' => 'ptr', 'Potri.011G053000' => 'ptr', 'Potri.011G119300' => 'ptr', 'Potri.013G113700' => 'ptr', 'Potri.018G107800' => 'ptr', 'Potri.019G084100' => 'ptr', 'Pp3c14_23720' => 'ppa', 'Pp3c16_6340' => 'ppa', 'Pp3c23_13420' => 'ppa', 'Pp3c24_2740' => 'ppa', 'Pp3c25_860' => 'ppa', 'Pp3c8_21750' => 'ppa', 'Prupe.1G273000' => 'ppe', 'Prupe.1G273700' => 'ppe', 'Prupe.1G274100' => 'ppe', 'Prupe.2G023300' => 'ppe', 'Prupe.4G048000' => 'ppe', 'Prupe.4G080400' => 'ppe', 'Prupe.4G181200' => 'ppe', 'Prupe.8G056900' => 'ppe', 'Prupe.8G168700' => 'ppe', 'Psat1g189080' => 'psa', 'Psat1g204760' => 'psa', 'Psat4g175560' => 'psa', 'Psat4g177720' => 'psa', 'Psat5g244240' => 'psa', 'Psat6g010720' => 'psa', 'Psat6g187200' => 'psa', 'Psat7g072040' => 'psa', 'PSO017G3501' => 'pso', 'PSO063G2148' => 'pso', 'PSO063G5608' => 'pso', 'PSO210G6392' => 'pso', 'PSO541G2319' => 'pso', 'PSO541G2836' => 'pso', 'PSO541G4012' => 'pso', 'PSO541G6253' => 'pso', 'PSO675G0580' => 'pso', 'PSO675G0856' => 'pso', 'PSO675G5635' => 'pso', 'PSO675G9157' => 'pso', 'PSO832G1660' => 'pso', 'PSO832G1969' => 'pso', 'QL02p007186' => 'qlo', 'QL02p033904' => 'qlo', 'QL03p064391' => 'qlo', 'QL05p040593' => 'qlo', 'QL05p058242' => 'qlo', 'QL08p021825' => 'qlo', 'QL11p004981' => 'qlo', 'RcHm_v2.0_Chr1g0318301' => 'rch', 'RcHm_v2.0_Chr4g0418501' => 'rch', 'RcHm_v2.0_Chr4g0439971' => 'rch', 'RcHm_v2.0_Chr5g0008541' => 'rch', 'RcHm_v2.0_Chr5g0014101' => 'rch', 'RcHm_v2.0_Chr5g0014131' => 'rch', 'RcHm_v2.0_Chr5g0033621' => 'rch', 'RcHm_v2.0_Chr6g0272041' => 'rch', 'RcHm_v2.0_Chr6g0278831' => 'rch', 'Rhsim02G0130400' => 'rsi', 'Rhsim02G0171100' => 'rsi', 'Rhsim05G0053000' => 'rsi', 'Rhsim05G0053100' => 'rsi', 'Rhsim06G0096500' => 'rsi', 'Rhsim06G0096600' => 'rsi', 'Rhsim06G0199100' => 'rsi', 'Rhsim12G0062300' => 'rsi', 'Rhsim12G0062800' => 'rsi', 'Sabra02G0118600' => 'sbr', 'Sabra04G0027300' => 'sbr', 'Sabra04G0119500' => 'sbr', 'Sabra08G0112500' => 'sbr', 'Sabra11G0036800' => 'sbr', 'Sabra11G0103800' => 'sbr', 'Sabra13G0096300' => 'sbr', 'Sabra16G0262300' => 'sbr', 'Sabra18G0091700' => 'sbr', 'Sabra19G0095400' => 'sbr', 'SalBow6G3080' => 'sbo', 'SalBow7G1157' => 'sbo', 'SalBow7G2123' => 'sbo', 'SalBow7G2285' => 'sbo', 'SalBow7G3537' => 'sbo', 'SalBow8G2947' => 'sbo', 'SalBow8G4463' => 'sbo', 'SalBow8G5466' => 'sbo', 'Sc01g0001750' => 'sci', 'Sc02g0006640' => 'sci', 'Sc02g0006670' => 'sci', 'Sc04g0008220' => 'sci', 'Sc05g0006190' => 'sci', 'Sc08g0002760' => 'sci', 'Sc17g0006170' => 'sci', 'Sc22g0002050' => 'sci', 'Sc23g0001190' => 'sci', 'Sc24g0000980' => 'sci', 'Sed0006245' => 'sed', 'Sed0007543' => 'sed', 'Sed0009411' => 'sed', 'Sed0010765' => 'sed', 'Sed0012944' => 'sed', 'Sed0014682' => 'sed', 'Sed0016174' => 'sed', 'Sed0016796' => 'sed', 'Sed0020317' => 'sed', 'Sed0021467' => 'sed', 'SEGI_01316' => 'sgi', 'SEGI_03374' => 'sgi', 'SEGI_16265' => 'sgi', 'SEGI_18569' => 'sgi', 'SEGI_20351' => 'sgi', 'SEGI_26395' => 'sgi', 'SEGI_29469' => 'sgi', 'SEGI_34771' => 'sgi', 'SEGI_36769' => 'sgi', 'SEGI_37139' => 'sgi', 'SGA_v2.0_scaffold100G29687' => 'sas', 'SGA_v2.0_scaffold118G32472' => 'sas', 'SGA_v2.0_scaffold14G07051' => 'sas', 'SGA_v2.0_scaffold183G39845' => 'sas', 'SGA_v2.0_scaffold1G00174' => 'sas', 'SGA_v2.0_scaffold22G09714' => 'sas', 'SGA_v2.0_scaffold333G48992' => 'sas', 'SGA_v2.0_scaffold46G17491' => 'sas', 'SGA_v2.0_scaffold49G18294' => 'sas', 'SGA_v2.0_scaffold63G21658' => 'sas', 'SHI01741' => 'shi', 'SHI05771' => 'shi', 'SHI18077' => 'shi', 'SHI20525' => 'shi', 'SHI20527' => 'shi', 'SHI20528' => 'shi', 'SMO172G0185' => 'smo', 'SMO198G0020' => 'smo', 'SMO351G0006' => 'smo', 'SMO356G0118' => 'smo', 'SMO358G0296' => 'smo', 'SMO367G0079' => 'smo', 'SMO367G1277' => 'smo', 'Solyc01g014220.3' => 'sly', 'Solyc01g111770.2' => 'sly', 'Solyc02g078180.3' => 'sly', 'Solyc03g006430.3' => 'sly', 'Solyc03g006456.1' => 'sly', 'Solyc03g079860.2' => 'sly', 'Solyc04g079770.3' => 'sly', 'Solyc05g007430.4' => 'sly', 'Solyc07g063150.3' => 'sly', 'Solyc08g016620.3' => 'sly', 'Solyc09g057590.3' => 'sly', 'Solyc09g057600.1' => 'sly', 'Solyc10g009050.3' => 'sly', 'Solyc11g017420.2' => 'sly', 'Sopen01g053810' => 'spe', 'Sopen02g023040' => 'spe', 'Sopen03g002440' => 'spe', 'Sopen04g033350' => 'spe', 'Sopen05g003310' => 'spe', 'Sopen07g004050' => 'spe', 'Sopen07g031340' => 'spe', 'Sopen08g006990' => 'spe', 'Sopen10g004830' => 'spe', 'Sopen11g009370' => 'spe', 'Sp1g24450' => 'spa', 'Sp1g29670' => 'spa', 'Sp1g39600' => 'spa', 'Sp2g11080' => 'spa', 'Sp2g13970' => 'spa', 'Sp4g16130' => 'spa', 'Sp6g13080' => 'spa', 'Sp7g37270' => 'spa', 'TAR371G0065' => 'tar', 'TAR376G0340' => 'tar', 'TAR376G0435' => 'tar', 'TAR381G0002' => 'tar', 'TAR381G1236' => 'tar', 'TAR624G0055' => 'tar', 'TAR624G0324' => 'tar', 'TAR624G0696' => 'tar', 'TAR624G0906' => 'tar', 'TAR625G0107' => 'tar', 'TAR626G0015' => 'tar', 'TAR626G1356' => 'tar', 'TAR627G0888' => 'tar', 'TAR628G0399' => 'tar', 'TAR628G1327' => 'tar', 'TAR629G2831' => 'tar', 'TAR629G2874' => 'tar', 'TAR633G1432' => 'tar', 'TAR633G2771' => 'tar', 'THA.LOC104803394' => 'tha', 'THA.LOC104805153' => 'tha', 'THA.LOC104806784' => 'tha', 'THA.LOC104810473' => 'tha', 'THA.LOC104813100' => 'tha', 'THA.LOC104814215' => 'tha', 'THA.LOC104815554' => 'tha', 'THA.LOC104820544' => 'tha', 'THA.LOC104824754' => 'tha', 'THA.LOC104827717' => 'tha', 'Thecc.02G031400' => 'tca', 'Thecc.02G055900' => 'tca', 'Thecc.02G350800' => 'tca', 'Thecc.06G150900' => 'tca', 'Thecc.06G186600' => 'tca', 'Thecc.07G089600' => 'tca', 'Thecc.08G020400' => 'tca', 'Thecc.08G182100' => 'tca', 'Thhalv10000873m.g' => 'esa', 'Thhalv10004185m.g' => 'esa', 'Thhalv10006981m.g' => 'esa', 'Thhalv10007204m.g' => 'esa', 'Thhalv10011374m.g' => 'esa', 'Thhalv10013482m.g' => 'esa', 'Thhalv10017801m.g' => 'esa', 'Thhalv10024983m.g' => 'esa', 'TPR.G12072' => 'tpr', 'TPR.G15769' => 'tpr', 'TPR.G16504' => 'tpr', 'TPR.G16506' => 'tpr', 'TPR.G24345' => 'tpr', 'TPR.G26666' => 'tpr', 'TPR.G27320' => 'tpr', 'TPR.G31819' => 'tpr', 'TPR.G38879' => 'tpr', 'TPR.G39015' => 'tpr', 'TPR.G8819' => 'tpr', 'TWI09G0924' => 'twi', 'TWI12G0811' => 'twi', 'TWI12G1294' => 'twi', 'TWI31G0150' => 'twi', 'TWI36G1262' => 'twi', 'TWI38G1287' => 'twi', 'TWI38G1633' => 'twi', 'TWI38G1982' => 'twi', 'TWI39G0116' => 'twi', 'TWI60G1011' => 'twi', 'TWI63G0171' => 'twi', 'TWI73G0839' => 'twi', 'TWI79G1511' => 'twi', 'unitig_0.g915' => 'ugi', 'unitig_0.g916' => 'ugi', 'unitig_21.g20219' => 'ugi', 'unitig_21.g20416' => 'ugi', 'unitig_578.g16132' => 'ugi', 'unitig_578.g16718' => 'ugi', 'unitig_62.g23481' => 'ugi', 'unitig_744.g24535' => 'ugi', 'unitig_749.g13525' => 'ugi', 'vmacro01248' => 'vma', 'vmacro02290' => 'vma', 'vmacro10946' => 'vma', 'vmacro11865' => 'vma', 'vmacro12493' => 'vma', 'vmacro17322' => 'vma', 'vmacro21599' => 'vma', 'vmacro23041' => 'vma', 'VMungo0251G0004' => 'vmu', 'VMungo0251G2639' => 'vmu', 'VMungo0251G2967' => 'vmu', 'VMungo0540G0864' => 'vmu', 'VMungo0540G1569' => 'vmu', 'VMungo0647G0317' => 'vmu', 'VMungo0720G1373' => 'vmu', 'VMungo0720G1508' => 'vmu', 'VMungo1080G0485' => 'vmu', 'VMungo1215G3177' => 'vmu', 'Zm00001eb112600' => 'zma', 'Zm00001eb120220' => 'zma', 'Zm00001eb153240' => 'zma', 'Zm00001eb168880' => 'zma', 'Zm00001eb213920' => 'zma', 'Zm00001eb228280' => 'zma', 'Zm00001eb254580' => 'zma', 'Zm00001eb272180' => 'zma', 'Zm00001eb293190' => 'zma', 'Zm00001eb322930' => 'zma', 'Zm00001eb353360' => 'zma', 'Zm00001eb353390' => 'zma', 'Zm00001eb353430' => 'zma', 'Zm00001eb353440' => 'zma', 'Zm00001eb353780' => 'zma' ) $gf_id = 'HOM05D000499' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000499' ) $data_identifier = 'HOM05D000499' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 29, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 12, 'amhyb' => (int) 8, 'aly' => (int) 12, 'aox' => (int) 9, 'arhy' => (int) 26, 'ath' => (int) 8, 'atr' => (int) 7, 'acertr' => (int) 10, 'cqu' => (int) 15, 'bca' => (int) 29, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 11, 'cansat' => (int) 8, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 9, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 8, 'cpa' => (int) 10, 'csa' => (int) 7, 'camsi' => (int) 20, 'dca' => (int) 8, 'din' => (int) 12, 'dzi' => (int) 14, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 6, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 38, 'gra' => (int) 16, 'vvi' => (int) 8, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 5, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 11, 'lja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 11, 'mpo' => (int) 3, 'mbi' => (int) 14, 'mdo' => (int) 14, 'mtr' => (int) 8, 'cme' => (int) 9, 'egut' => (int) 9, 'ama' => (int) 11, 'nta' => (int) 17, 'nnu' => (int) 11, 'oeu' => (int) 18, 'osa' => (int) 8, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 6, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 9, 'rsi' => (int) 9, 'sbr' => (int) 10, 'sbo' => (int) 8, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 10, 'sas' => (int) 10, 'shi' => (int) 6, 'smo' => (int) 7, 'sly' => (int) 14, 'spe' => (int) 10, 'spa' => (int) 8, 'tar' => (int) 19, 'tha' => (int) 10, 'tca' => (int) 8, 'esa' => (int) 8, 'tpr' => (int) 11, 'twi' => (int) 13, 'ugi' => (int) 9, 'vma' => (int) 8, 'vmu' => (int) 10, 'zma' => (int) 15 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb353780' $species_info = array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ) $local_species = 'twi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000499', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1066', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p29780' => 'bna', 'A02p33180' => 'bna', 'A03p16470' => 'bna', 'A03p66010' => 'bna', 'A04p25970' => 'bna', 'A06p01270' => 'bna', 'A06p46080' => 'bna', 'A07p11400' => 'bna', 'A08p01840' => 'bna', 'A08p08230' => 'bna', 'A08p25740' => 'bna', 'A09p32070' => 'bna', 'A09p37830' => 'bna', 'A09p42840' => 'bna', 'A09p42850' => 'bna', 'Aa31LG10G2060' => 'aar', 'Aa31LG2G7410' => 'aar', 'Aa31LG6G10200' => 'aar', 'Aa31LG6G16680' => 'aar', 'Aa31LG6G8470' => 'aar', 'Aa31LG9G12730' => 'aar', 'Aa31LG9G13680' => 'aar', 'Aa31LG9G14920' => 'aar', 'Aa31LG9G6650' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4977' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5467' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3254' => 'aag', 'Actinidia02578' => 'ach', 'Actinidia07693' => 'ach', 'Actinidia08413' => 'ach', 'Actinidia08414' => 'ach', 'Actinidia15289' => 'ach', 'Actinidia19871' => 'ach', 'Actinidia21475' => 'ach', 'Actinidia22576' => 'ach', 'Actinidia28327' => 'ach', 'Actinidia32491' => 'ach', 'Actinidia39463' => 'ach', 'Actinidia39571' => 'ach', 'Ah.01g013750' => 'amhyb', 'Ah.01g023210' => 'amhyb', 'Ah.04g164850' => 'amhyb', 'Ah.05g178060' => 'amhyb', 'Ah.07g204270' => 'amhyb', 'Ah.07g208480' => 'amhyb', 'Ah.09g237410' => 'amhyb', 'Ah.14g089460' => 'amhyb', 'AL1G41790' => 'aly', 'AL1G49050' => 'aly', 'AL1G53810' => 'aly', 'AL1G61400' => 'aly', 'AL4G18580' => 'aly', 'AL5G12510' => 'aly', 'AL5G12540' => 'aly', 'AL6G43230' => 'aly', 'AL7G10370' => 'aly', 'AL7G19250' => 'aly', 'AL8G12240' => 'aly', 'AL8G18540' => 'aly', 'Aqoxy1G02409' => 'aox', 'Aqoxy2G03993' => 'aox', 'Aqoxy3G03357' => 'aox', 'Aqoxy4G00785' => 'aox', 'Aqoxy5G02598' => 'aox', 'Aqoxy6G00132' => 'aox', 'Aqoxy7G01776' => 'aox', 'Aqoxy7G02316' => 'aox', 'Aqoxy7G03973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.12AFKW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B8730' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27IQR1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3F75VG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3RE0GA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41TCQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.527VTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FIR39' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5W8UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DA38EV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ63HS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H1I32C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HC27T5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4M8AP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7N3CZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9UVDZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LS1NQA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT1D4B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SKC4TM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCFV76' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF9Q1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQWD9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1ZM88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WE07RT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YCK7VH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJE6Q6' => 'arhy', 'AT1G28240' => 'ath', 'AT1G34550' => 'ath', 'AT1G53040' => 'ath', 'AT2G02910' => 'ath', 'AT4G09630' => 'ath', 'AT4G38500' => 'ath', 'AT5G42660' => 'ath', 'AT5G46220' => 'ath', 'ATR0152G026' => 'atr', 'ATR0564G343' => 'atr', 'ATR0706G151' => 'atr', 'ATR0733G207' => 'atr', 'ATR0751G234' => 'atr', 'ATR0807G048' => 'atr', 'ATR1091G084' => 'atr', 'Atru.chr10.1229' => 'acertr', 'Atru.chr10.1230' => 'acertr', 'Atru.chr10.1874' => 'acertr', 'Atru.chr11.1808' => 'acertr', 'Atru.chr13.1795' => 'acertr', 'Atru.chr13.570' => 'acertr', 'Atru.chr2.2608' => 'acertr', 'Atru.chr2.2609' => 'acertr', 'Atru.chr5.3428' => 'acertr', 'Atru.chr8.1171' => 'acertr', 'AUR62004651' => 'cqu', 'AUR62008675' => 'cqu', 'AUR62010014' => 'cqu', 'AUR62013004' => 'cqu', 'AUR62014825' => 'cqu', 'AUR62015015' => 'cqu', 'AUR62015151' => 'cqu', 'AUR62017020' => 'cqu', 'AUR62019422' => 'cqu', 'AUR62023570' => 'cqu', 'AUR62025571' => 'cqu', 'AUR62029098' => 'cqu', 'AUR62033863' => 'cqu', 'AUR62034296' => 'cqu', 'AUR62040075' => 'cqu', 'BcaB02g07334' => 'bca', 'BcaB02g10575' => 'bca', 'BcaB03g12119' => 'bca', 'BcaB03g12120' => 'bca', 'BcaB03g13945' => 'bca', 'BcaB04g17123' => 'bca', 'BcaB04g17867' => 'bca', 'BcaB04g19839' => 'bca', 'BcaB07g30317' => 'bca', 'BcaB07g32432' => 'bca', 'BcaB07g33362' => 'bca', 'BcaB08g36611' => 'bca', 'BcaC01g00028' => 'bca', 'BcaC01g01356' => 'bca', 'BcaC01g02034' => 'bca', 'BcaC01g06051' => 'bca', 'BcaC03g16839' => 'bca', 'BcaC03g17176' => 'bca', 'BcaC05g26829' => 'bca', 'BcaC06g31490' => 'bca', 'BcaC06g35344' => 'bca', 'BcaC06g36570' => 'bca', 'BcaC07g37537' => 'bca', 'BcaC08g43491' => 'bca', 'BcaC08g43773' => 'bca', 'BcaNung00234' => 'bca', 'BcaNung01982' => 'bca', 'BcaNung03707' => 'bca', 'BcaNung06454' => 'bca', 'BolC2t10762H' => 'bol', 'BolC2t11191H' => 'bol', 'BolC3t14322H' => 'bol', 'BolC3t19747H' => 'bol', 'BolC3t21425H' => 'bol', 'BolC4t27800H' => 'bol', 'BolC5t31423H' => 'bol', 'BolC6t35951H' => 'bol', 'BolC6t36282H' => 'bol', 'BolC7t40678H' => 'bol', 'BolC7t40679H' => 'bol', 'BolC7t42222H' => 'bol', 'BolC7t43492H' => 'bol', 'BolC7t46785H' => 'bol', 'BolC8t47853H' => 'bol', 'BolC9t56805H' => 'bol', 'BraA02t08000Z' => 'bra', 'BraA02t08341Z' => 'bra', 'BraA03t10936Z' => 'bra', 'BraA03t15657Z' => 'bra', 'BraA04t18100Z' => 'bra', 'BraA05t20523Z' => 'bra', 'BraA06t23353Z' => 'bra', 'BraA06t27473Z' => 'bra', 'BraA06t27769Z' => 'bra', 'BraA07t28928Z' => 'bra', 'BraA08t32236Z' => 'bra', 'BraA08t32841Z' => 'bra', 'BraA08t34524Z' => 'bra', 'BraA09t38742Z' => 'bra', 'BraA09t39295Z' => 'bra', 'C02p47180' => 'bna', 'C02p50990' => 'bna', 'C03p19360' => 'bna', 'C03p74950' => 'bna', 'C03p91000' => 'bna', 'C04p63260' => 'bna', 'C05p27050' => 'bna', 'C06p08750' => 'bna', 'C06p11490' => 'bna', 'C07p02820' => 'bna', 'C07p17180' => 'bna', 'C07p29440' => 'bna', 'C07p63730' => 'bna', 'C09p39260' => 'bna', 'CAN.G1164.34' => 'can', 'CAN.G1164.39' => 'can', 'CAN.G1530.3' => 'can', 'CAN.G162.61' => 'can', 'CAN.G176.6' => 'can', 'CAN.G289.49' => 'can', 'CAN.G370.21' => 'can', 'CAN.G370.22' => 'can', 'CAN.G371.117' => 'can', 'CAN.G58.37' => 'can', 'CAN.G588.98' => 'can', 'CANSAT21G2266' => 'cansat', 'CANSAT25G2799' => 'cansat', 'CANSAT35G0862' => 'cansat', 'CANSAT35G1704' => 'cansat', 'CANSAT35G1760' => 'cansat', 'CANSAT56G3971' => 'cansat', 'CANSAT56G4116' => 'cansat', 'CANSAT80G1259' => 'cansat', 'CARHR027730' => 'chi', 'CARHR033880' => 'chi', 'CARHR043270' => 'chi', 'CARHR145330' => 'chi', 'CARHR145340' => 'chi', 'CARHR175570' => 'chi', 'CARHR181570' => 'chi', 'CARHR258470' => 'chi', 'CARHR260490' => 'chi', 'CARHR294220' => 'chi', 'Carub.0001s2668' => 'cru', 'Carub.0001s3257' => 'cru', 'Carub.0001s4220' => 'cru', 'Carub.0005s0179' => 'cru', 'Carub.0006s2807' => 'cru', 'Carub.0007s0039' => 'cru', 'Carub.0008s0169' => 'cru', 'Carub.0008s0636' => 'cru', 'Ca_00338_v3' => 'car', 'Ca_00542_v3' => 'car', 'Ca_01844_v3' => 'car', 'Ca_10611_v3' => 'car', 'Ca_13326_v3' => 'car', 'Ca_17944_v3' => 'car', 'Ca_18546_v3' => 'car', 'Ca_24219_v3' => 'car', 'Ca_29972_v3' => 'car', 'CBR_g3681' => 'cbr', 'CBR_g40021' => 'cbr', 'Cc01_g08140' => 'ccan', 'Cc02_g13410' => 'ccan', 'Cc02_g37480' => 'ccan', 'Cc05_g12030' => 'ccan', 'Cc09_g03370' => 'ccan', 'Cc09_g10300' => 'ccan', 'Cc10_g03530' => 'ccan', 'Cc10_g11380' => 'ccan', 'CDE01G0176' => 'cde', 'CDE02G0675' => 'cde', 'CDE02G0942' => 'cde', 'CDE02G1153' => 'cde', 'CDE02G4177' => 'cde', 'CDE04G2117' => 'cde', 'CDE04G2736' => 'cde', 'CDE08G1161' => 'cde', 'CDE09G1238' => 'cde', 'Cfa000467' => 'cfa', 'Cfa000947' => 'cfa', 'Cfa004969' => 'cfa', 'Cfa005284' => 'cfa', 'Cfa008993' => 'cfa', 'Cfa018187' => 'cfa', 'Cfa018454' => 'cfa', 'Cfa020585' => 'cfa', 'Ciclev10000424m.g' => 'ccl', 'Ciclev10003605m.g' => 'ccl', 'Ciclev10007828m.g' => 'ccl', 'Ciclev10014620m.g' => 'ccl', 'Ciclev10015169m.g' => 'ccl', 'Ciclev10018291m.g' => 'ccl', 'Ciclev10028256m.g' => 'ccl', 'Ciclev10033822m.g' => 'ccl', 'CiPaw.05G060300' => 'cil', 'CiPaw.05G085000' => 'cil', 'CiPaw.06G083700' => 'cil', 'CiPaw.06G120300' => 'cil', 'CiPaw.09G060500' => 'cil', 'CiPaw.09G123800' => 'cil', 'CiPaw.11G169700' => 'cil', 'CiPaw.12G118300' => 'cil', 'CiPaw.15G071000' => 'cil', 'CiPaw.15G081900' => 'cil', 'ClCG01G024610' => 'cla', 'ClCG03G006070' => 'cla', 'ClCG05G019250' => 'cla', 'ClCG09G009500' => 'cla', 'ClCG11G008200' => 'cla', 'ClCG11G018080' => 'cla', 'COL.COLO4_17373' => 'col', 'COL.COLO4_22994' => 'col', 'COL.COLO4_26389' => 'col', 'COL.COLO4_27170' => 'col', 'COL.COLO4_31074' => 'col', 'COL.COLO4_31465' => 'col', 'COL.COLO4_36438' => 'col', 'COL.COLO4_36439' => 'col', 'Cpa.g.c38781' => 'cpa', 'Cpa.g.sc128.12' => 'cpa', 'Cpa.g.sc166.7' => 'cpa', 'Cpa.g.sc166.8' => 'cpa', 'Cpa.g.sc20.111' => 'cpa', 'Cpa.g.sc27.31' => 'cpa', 'Cpa.g.sc64.36' => 'cpa', 'Cpa.g.sc64.37' => 'cpa', 'Cpa.g.sc66.49' => 'cpa', 'Cpa.g.sc80.64' => 'cpa', 'CsaV3_1G012320' => 'csa', 'CsaV3_2G008480' => 'csa', 'CsaV3_2G033450' => 'csa', 'CsaV3_3G044830' => 'csa', 'CsaV3_4G033710' => 'csa', 'CsaV3_6G051730' => 'csa', 'CsaV3_7G025350' => 'csa', 'CSS0001067' => 'camsi', 'CSS0005996' => 'camsi', 'CSS0006590' => 'camsi', 'CSS0009673' => 'camsi', 'CSS0010201' => 'camsi', 'CSS0010549' => 'camsi', 'CSS0011364' => 'camsi', 'CSS0014473' => 'camsi', 'CSS0014961' => 'camsi', 'CSS0020191' => 'camsi', 'CSS0021165' => 'camsi', 'CSS0022306' => 'camsi', 'CSS0030591' => 'camsi', 'CSS0030696' => 'camsi', 'CSS0032653' => 'camsi', 'CSS0037487' => 'camsi', 'CSS0041102' => 'camsi', 'CSS0041261' => 'camsi', 'CSS0046246' => 'camsi', 'CSS0049256' => 'camsi', 'DCAR_004075' => 'dca', 'DCAR_011538' => 'dca', 'DCAR_019553' => 'dca', 'DCAR_020952' => 'dca', 'DCAR_021739' => 'dca', 'DCAR_027407' => 'dca', 'DCAR_027913' => 'dca', 'DCAR_028066' => 'dca', 'Dinv05899' => 'din', 'Dinv07563' => 'din', 'Dinv08010' => 'din', 'Dinv14125' => 'din', 'Dinv20172' => 'din', 'Dinv30743' => 'din', 'Dinv31229' => 'din', 'Dinv34162' => 'din', 'Dinv36028' => 'din', 'Dinv39368' => 'din', 'Dinv40565' => 'din', 'Dinv41706' => 'din', 'Duzib052G0089' => 'dzi', 'Duzib116G0641' => 'dzi', 'Duzib132G0069' => 'dzi', 'Duzib132G1219' => 'dzi', 'Duzib147G0278' => 'dzi', 'Duzib160G0480' => 'dzi', 'Duzib170G0661' => 'dzi', 'Duzib177G0591' => 'dzi', 'Duzib187G1353' => 'dzi', 'Duzib192G0858' => 'dzi', 'Duzib192G0883' => 'dzi', 'Duzib213G0506' => 'dzi', 'Duzib235G0289' => 'dzi', 'Duzib251G0422' => 'dzi', 'ECA232G3898' => 'eca', 'ECA233G5950' => 'eca', 'ECA234G1699' => 'eca', 'ECA234G2421' => 'eca', 'ECA236G0426' => 'eca', 'ECA236G4331' => 'eca', 'ECA248G2573' => 'eca', 'EL10Ac1g00077' => 'bvu', 'EL10Ac1g01746' => 'bvu', 'EL10Ac2g03464' => 'bvu', 'EL10Ac4g08176' => 'bvu', 'EL10Ac7g17521' => 'bvu', 'EL10Ac8g20386' => 'bvu', 'EL10Ac9g21343' => 'bvu', 'EL10Ac9g22688' => 'bvu', 'Eucgr.B03434' => 'egr', 'Eucgr.D00618' => 'egr', 'Eucgr.E02395' => 'egr', 'Eucgr.F01129' => 'egr', 'Eucgr.F02622' => 'egr', 'Eucgr.F04207' => 'egr', 'FAN01G0570' => 'fan', 'FAN03G3351' => 'fan', 'FAN06G3702' => 'fan', 'FAN07G2149' => 'fan', 'FAN10G3758' => 'fan', 'FAN11G1170' => 'fan', 'FAN11G2050' => 'fan', 'FAN11G2724' => 'fan', 'FAN12G1700' => 'fan', 'FAN12G2028' => 'fan', 'FAN15G1160' => 'fan', 'FAN15G3063' => 'fan', 'FAN16G2540' => 'fan', 'FAN16G3077' => 'fan', 'FAN16G3624' => 'fan', 'FAN17G0221' => 'fan', 'FAN20G2492' => 'fan', 'FAN20G2905' => 'fan', 'FAN21G0548' => 'fan', 'FAN21G1300' => 'fan', 'FAN22G0077' => 'fan', 'FAN22G1315' => 'fan', 'FAN24G1280' => 'fan', 'FAN24G1445' => 'fan', 'FAN24G3527' => 'fan', 'FAN25G0464' => 'fan', 'FAN25G2885' => 'fan', 'FAN25G3270' => 'fan', 'FAN27G1101' => 'fan', 'FAN27G2846' => 'fan', 'FAN27G3524' => 'fan', 'FvH4_2g11770' => 'fve', 'FvH4_2g15630' => 'fve', 'FvH4_3g05570' => 'fve', 'FvH4_3g09110' => 'fve', 'FvH4_3g19940' => 'fve', 'FvH4_4g04821' => 'fve', 'FvH4_4g31480' => 'fve', 'FvH4_7g01740' => 'fve', 'Glyma.05G130400' => 'gma', 'Glyma.05G156400' => 'gma', 'Glyma.07G197000' => 'gma', 'Glyma.08G085151' => 'gma', 'Glyma.08G114500' => 'gma', 'Glyma.08G300400' => 'gma', 'Glyma.10G215800' => 'gma', 'Glyma.12G224400' => 'gma', 'Glyma.13G179300' => 'gma', 'Glyma.13G218151' => 'gma', 'Glyma.13G238800' => 'gma', 'Glyma.13G276900' => 'gma', 'Glyma.14G078200' => 'gma', 'Glyma.15G074500' => 'gma', 'Glyma.15G094100' => 'gma', 'Glyma.17G247200' => 'gma', 'Glyma.18G120100' => 'gma', 'Glyma.20G176000' => 'gma', 'Gohir.A01G063600' => 'ghi', 'Gohir.A01G170301' => 'ghi', 'Gohir.A02G060500' => 'ghi', 'Gohir.A05G133850' => 'ghi', 'Gohir.A05G161400' => 'ghi', 'Gohir.A06G012900' => 'ghi', 'Gohir.A06G035901' => 'ghi', 'Gohir.A06G127100' => 'ghi', 'Gohir.A06G210500' => 'ghi', 'Gohir.A08G008650' => 'ghi', 'Gohir.A09G072700' => 'ghi', 'Gohir.A09G088301' => 'ghi', 'Gohir.A10G040600' => 'ghi', 'Gohir.A12G036300' => 'ghi', 'Gohir.A12G143350' => 'ghi', 'Gohir.A12G165500' => 'ghi', 'Gohir.A13G145700' => 'ghi', 'Gohir.D01G050000' => 'ghi', 'Gohir.D01G051366' => 'ghi', 'Gohir.D01G161350' => 'ghi', 'Gohir.D02G065900' => 'ghi', 'Gohir.D05G164200' => 'ghi', 'Gohir.D05G355500' => 'ghi', 'Gohir.D06G010400' => 'ghi', 'Gohir.D06G111250' => 'ghi', 'Gohir.D06G132000' => 'ghi', 'Gohir.D06G210500' => 'ghi', 'Gohir.D07G165675' => 'ghi', 'Gohir.D08G062240' => 'ghi', 'Gohir.D08G086101' => 'ghi', 'Gohir.D08G138060' => 'ghi', 'Gohir.D09G072300' => 'ghi', 'Gohir.D10G041400' => 'ghi', 'Gohir.D11G191020' => 'ghi', 'Gohir.D11G212066' => 'ghi', 'Gohir.D12G036300' => 'ghi', 'Gohir.D12G168600' => 'ghi', 'Gohir.D13G150600' => 'ghi', 'Gorai.001G057300' => 'gra', 'Gorai.002G069900' => 'gra', 'Gorai.002G200000' => 'gra', 'Gorai.003G067600' => 'gra', 'Gorai.005G074800' => 'gra', 'Gorai.006G087300' => 'gra', 'Gorai.008G037500' => 'gra', 'Gorai.008G181400' => 'gra', 'Gorai.009G169400' => 'gra', 'Gorai.009G387900' => 'gra', 'Gorai.010G013300' => 'gra', 'Gorai.010G153800' => 'gra', 'Gorai.010G255800' => 'gra', 'Gorai.011G043700' => 'gra', 'Gorai.011G198900' => 'gra', 'Gorai.013G168400' => 'gra', 'GSVIVG01005212001' => 'vvi', 'GSVIVG01006163001' => 'vvi', 'GSVIVG01009625001' => 'vvi', 'GSVIVG01014338001' => 'vvi', 'GSVIVG01020005001' => 'vvi', 'GSVIVG01021450001' => 'vvi', 'GSVIVG01023975001' => 'vvi', 'GSVIVG01034490001' => 'vvi', 'HanXRQChr04g0112071' => 'han', 'HanXRQChr05g0131151' => 'han', 'HanXRQChr09g0262371' => 'han', 'HanXRQChr09g0268401' => 'han', 'HanXRQChr10g0279241' => 'han', 'HanXRQChr10g0297961' => 'han', 'HanXRQChr11g0326231' => 'han', 'HanXRQChr11g0328471' => 'han', 'HanXRQChr16g0507941' => 'han', 'HanXRQChr17g0560211' => 'han', 'Haze_02108' => 'cav', 'Haze_02428' => 'cav', 'Haze_05593' => 'cav', 'Haze_06448' => 'cav', 'Haze_09427' => 'cav', 'Haze_12022' => 'cav', 'Haze_17612' => 'cav', 'Haze_17928' => 'cav', 'Hma1.2p1_0032F.1_g019250' => 'hma', 'Hma1.2p1_0163F.1_g072690' => 'hma', 'Hma1.2p1_0265F.1_g106710' => 'hma', 'Hma1.2p1_0286F.1_g113970' => 'hma', 'Hma1.2p1_0363F.1_g136640' => 'hma', 'Hma1.2p1_0584F.1_g183470' => 'hma', 'Hma1.2p1_0885F.1_g232570' => 'hma', 'HPP92_006022' => 'vpl', 'HPP92_007320' => 'vpl', 'HPP92_011521' => 'vpl', 'HPP92_019387' => 'vpl', 'HPP92_024038' => 'vpl', 'Hund05891' => 'sun', 'Hund06450' => 'sun', 'Hund12053' => 'sun', 'Hund16800' => 'sun', 'Hund21222' => 'sun', 'Hund22896' => 'sun', 'Hund23746' => 'sun', 'Hund27083' => 'sun', 'Lalb_Chr02g0141831' => 'lal', 'Lalb_Chr02g0141841' => 'lal', 'Lalb_Chr05g0220411' => 'lal', 'Lalb_Chr06g0162081' => 'lal', 'Lalb_Chr09g0327651' => 'lal', 'Lalb_Chr13g0295051' => 'lal', 'Lalb_Chr15g0086801' => 'lal', 'Lalb_Chr16g0383781' => 'lal', 'Lalb_Chr16g0383791' => 'lal', 'Lalb_Chr18g0055441' => 'lal', 'Lalb_Chr18g0059611' => 'lal', 'Lalb_Chr20g0109661' => 'lal', 'Lalb_Chr20g0109831' => 'lal', 'Lalb_Chr20g0121871' => 'lal', 'Lalb_Chr22g0355361' => 'lal', 'Lalb_Chr25g0286371' => 'lal', 'Lj1A1187G43' => 'lonja', 'Lj1A1205T50' => 'lonja', 'Lj1A800G33' => 'lonja', 'Lj1C1187T7' => 'lonja', 'Lj1C843T11' => 'lonja', 'Lj1g0010940' => 'lja', 'Lj2A288T69' => 'lonja', 'Lj3g0024276' => 'lja', 'Lj4A47T76' => 'lonja', 'Lj4g0005805' => 'lja', 'Lj4g0006097' => 'lja', 'Lj4g0008528' => 'lja', 'Lj4g0024907' => 'lja', 'Lj5g0012472' => 'lja', 'Lj5g0018648' => 'lja', 'Lj6C789G1' => 'lonja', 'Lj6g0004000' => 'lja', 'Lj7A292G67' => 'lonja', 'Lj7A292T64' => 'lonja', 'Lj9A400T58' => 'lonja', 'Lsat_1_v5_gn_1_126181' => 'lsa', 'Lsat_1_v5_gn_4_123041' => 'lsa', 'Lsat_1_v5_gn_4_133620' => 'lsa', 'Lsat_1_v5_gn_4_53221' => 'lsa', 'Lsat_1_v5_gn_4_71961' => 'lsa', 'Lsat_1_v5_gn_7_105241' => 'lsa', 'Lsat_1_v5_gn_7_21361' => 'lsa', 'Lsat_1_v5_gn_7_28860' => 'lsa', 'Lsat_1_v5_gn_7_31260' => 'lsa', 'Lsat_1_v5_gn_8_52801' => 'lsa', 'Manes.02G191400' => 'mes', 'Manes.03G110100' => 'mes', 'Manes.04G071100' => 'mes', 'Manes.05G100500' => 'mes', 'Manes.05G164700' => 'mes', 'Manes.15G087000' => 'mes', 'Manes.15G121500' => 'mes', 'Manes.16G028300' => 'mes', 'Manes.17G046100' => 'mes', 'Manes.17G069800' => 'mes', 'Manes.18G100500' => 'mes', 'Mapoly0002s0109' => 'mpo', 'Mapoly0024s0007' => 'mpo', 'Mapoly0089s0032' => 'mpo', 'MBI04_g42241_MAGBIO' => 'mbi', 'MBI05_g11988_MAGBIO' => 'mbi', 'MBI05_g35452_MAGBIO' => 'mbi', 'MBI07_g30179_MAGBIO' => 'mbi', 'MBI07_g35859_MAGBIO' => 'mbi', 'MBI07_g35860_MAGBIO' => 'mbi', 'MBI07_g37166_MAGBIO' => 'mbi', 'MBI08_g18172_MAGBIO' => 'mbi', 'MBI09_g08441_MAGBIO' => 'mbi', 'MBI13_g01676_MAGBIO' => 'mbi', 'MBI14_g42955_MAGBIO' => 'mbi', 'MBI16_g13161_MAGBIO' => 'mbi', 'MBI17_g27204_MAGBIO' => 'mbi', 'MBI19_g21595_MAGBIO' => 'mbi', 'MD00G1148400' => 'mdo', 'MD02G1301200' => 'mdo', 'MD03G1227800' => 'mdo', 'MD05G1041100' => 'mdo', 'MD05G1124800' => 'mdo', 'MD05G1284000' => 'mdo', 'MD05G1338800' => 'mdo', 'MD05G1338900' => 'mdo', 'MD07G1022800' => 'mdo', 'MD10G1047500' => 'mdo', 'MD10G1127500' => 'mdo', 'MD10G1262300' => 'mdo', 'MD10G1293800' => 'mdo', 'MD16G1074300' => 'mdo', 'Medtr1g021670' => 'mtr', 'Medtr1g096320' => 'mtr', 'Medtr2g013690' => 'mtr', 'Medtr2g019450' => 'mtr', 'Medtr2g085170' => 'mtr', 'Medtr4g088785' => 'mtr', 'Medtr8g055930' => 'mtr', 'Medtr8g085850' => 'mtr', 'MELO3C002605.2' => 'cme', 'MELO3C003891.2' => 'cme', 'MELO3C004012.2' => 'cme', 'MELO3C007134.2' => 'cme', 'MELO3C008118.2' => 'cme', 'MELO3C016700.2' => 'cme', 'MELO3C024127.2' => 'cme', 'MELO3C033361.2' => 'cme', 'MELO3C033362.2' => 'cme', 'Migut.C00430' => 'egut', 'Migut.C01246' => 'egut', 'Migut.E00101' => 'egut', 'Migut.H01486' => 'egut', 'Migut.H01939' => 'egut', 'Migut.K00360' => 'egut', 'Migut.M00910' => 'egut', 'Migut.M01139' => 'egut', 'Migut.N02677' => 'egut', 'MSTRG.13252' => 'ama', 'MSTRG.14701' => 'ama', 'MSTRG.1521' => 'ama', 'MSTRG.15884' => 'ama', 'MSTRG.16242' => 'ama', 'MSTRG.22285' => 'ama', 'MSTRG.22444' => 'ama', 'MSTRG.2349' => 'ama', 'MSTRG.26308' => 'ama', 'MSTRG.28296' => 'ama', 'MSTRG.9895' => 'ama', 'Nitab4.5_0000110g0060' => 'nta', 'Nitab4.5_0000420g0130' => 'nta', 'Nitab4.5_0000422g0030' => 'nta', 'Nitab4.5_0000560g0180' => 'nta', 'Nitab4.5_0000703g0100' => 'nta', 'Nitab4.5_0000786g0200' => 'nta', 'Nitab4.5_0001336g0020' => 'nta', 'Nitab4.5_0001796g0030' => 'nta', 'Nitab4.5_0003348g0060' => 'nta', 'Nitab4.5_0003698g0040' => 'nta', 'Nitab4.5_0003942g0090' => 'nta', 'Nitab4.5_0004775g0070' => 'nta', 'Nitab4.5_0004864g0030' => 'nta', 'Nitab4.5_0005615g0020' => 'nta', 'Nitab4.5_0009288g0030' => 'nta', 'Nitab4.5_0009341g0010' => 'nta', 'Nitab4.5_0009535g0010' => 'nta', 'Nn1g03995' => 'nnu', 'Nn1g04100' => 'nnu', 'Nn1g06530' => 'nnu', 'Nn3g16404' => 'nnu', 'Nn3g17212' => 'nnu', 'Nn3g20776' => 'nnu', 'Nn3g21923' => 'nnu', 'Nn5g27737' => 'nnu', 'Nn5g29461' => 'nnu', 'Nn7g38355' => 'nnu', 'Nn8g39873' => 'nnu', 'Oeu000548.2' => 'oeu', 'Oeu004672.1' => 'oeu', 'Oeu015605.2' => 'oeu', 'Oeu016092.1' => 'oeu', 'Oeu017879.3' => 'oeu', 'Oeu024910.1' => 'oeu', 'Oeu028965.1' => 'oeu', 'Oeu031269.1' => 'oeu', 'Oeu031270.1' => 'oeu', 'Oeu032535.1' => 'oeu', 'Oeu034151.1' => 'oeu', 'Oeu034152.1' => 'oeu', 'Oeu034588.2' => 'oeu', 'Oeu050846.1' => 'oeu', 'Oeu050849.2' => 'oeu', 'Oeu051063.2' => 'oeu', 'Oeu052368.1' => 'oeu', 'Oeu052370.1' => 'oeu', 'Os01g0210400' => 'osa', 'Os01g0304300' => 'osa', 'Os01g0749100' => 'osa', 'Os02g0745800' => 'osa', 'Os03g0769050' => 'osa', 'Os05g0531500' => 'osa', 'Os06g0724300' => 'osa', 'Os11g0198100' => 'osa', 'Peaxi162Scf00069g01425' => 'pax', 'Peaxi162Scf00280g00811' => 'pax', 'Peaxi162Scf00310g00615' => 'pax', 'Peaxi162Scf00362g00542' => 'pax', 'Peaxi162Scf00461g00310' => 'pax', 'Peaxi162Scf00530g00118' => 'pax', 'Peaxi162Scf00541g00057' => 'pax', 'Peaxi162Scf00661g00017' => 'pax', 'Peaxi162Scf00926g00027' => 'pax', 'Peaxi162Scf01064g00263' => 'pax', 'Peaxi162Scf01211g00135' => 'pax', 'PGR004G2336' => 'pgr', 'PGR042G0327' => 'pgr', 'PGR042G1957' => 'pgr', 'PGR042G2003' => 'pgr', 'PGR042G3929' => 'pgr', 'PGR083G1137' => 'pgr', 'PGR083G1364' => 'pgr', 'PGSC0003DMG400003381' => 'stu', 'PGSC0003DMG400003417' => 'stu', 'PGSC0003DMG400008981' => 'stu', 'PGSC0003DMG400012417' => 'stu', 'PGSC0003DMG400012823' => 'stu', 'PGSC0003DMG400016885' => 'stu', 'PGSC0003DMG400022812' => 'stu', 'PGSC0003DMG400029726' => 'stu', 'PGSC0003DMG401009243' => 'stu', 'PGSC0003DMG401031505' => 'stu', 'PGSC0003DMG402031505' => 'stu', 'Phvul.001G017600' => 'pvu', 'Phvul.002G193500' => 'pvu', 'Phvul.002G228900' => 'pvu', 'Phvul.002G236800' => 'pvu', 'Phvul.003G049500' => 'pvu', 'Phvul.005G072000' => 'pvu', 'Phvul.006G164800' => 'pvu', 'Phvul.006G185100' => 'pvu', 'Phvul.007G090000' => 'pvu', 'Potri.001G399800' => 'ptr', 'Potri.002G149900' => 'ptr', 'Potri.004G044100' => 'ptr', 'Potri.004G177600' => 'ptr', 'Potri.009G138000' => 'ptr', 'Potri.010G094000' => 'ptr', 'Potri.011G053000' => 'ptr', 'Potri.011G119300' => 'ptr', 'Potri.013G113700' => 'ptr', 'Potri.018G107800' => 'ptr', 'Potri.019G084100' => 'ptr', 'Pp3c14_23720' => 'ppa', 'Pp3c16_6340' => 'ppa', 'Pp3c23_13420' => 'ppa', 'Pp3c24_2740' => 'ppa', 'Pp3c25_860' => 'ppa', 'Pp3c8_21750' => 'ppa', 'Prupe.1G273000' => 'ppe', 'Prupe.1G273700' => 'ppe', 'Prupe.1G274100' => 'ppe', 'Prupe.2G023300' => 'ppe', 'Prupe.4G048000' => 'ppe', 'Prupe.4G080400' => 'ppe', 'Prupe.4G181200' => 'ppe', 'Prupe.8G056900' => 'ppe', 'Prupe.8G168700' => 'ppe', 'Psat1g189080' => 'psa', 'Psat1g204760' => 'psa', 'Psat4g175560' => 'psa', 'Psat4g177720' => 'psa', 'Psat5g244240' => 'psa', 'Psat6g010720' => 'psa', 'Psat6g187200' => 'psa', 'Psat7g072040' => 'psa', 'PSO017G3501' => 'pso', 'PSO063G2148' => 'pso', 'PSO063G5608' => 'pso', 'PSO210G6392' => 'pso', 'PSO541G2319' => 'pso', 'PSO541G2836' => 'pso', 'PSO541G4012' => 'pso', 'PSO541G6253' => 'pso', 'PSO675G0580' => 'pso', 'PSO675G0856' => 'pso', 'PSO675G5635' => 'pso', 'PSO675G9157' => 'pso', 'PSO832G1660' => 'pso', 'PSO832G1969' => 'pso', 'QL02p007186' => 'qlo', 'QL02p033904' => 'qlo', 'QL03p064391' => 'qlo', 'QL05p040593' => 'qlo', 'QL05p058242' => 'qlo', 'QL08p021825' => 'qlo', 'QL11p004981' => 'qlo', 'RcHm_v2.0_Chr1g0318301' => 'rch', 'RcHm_v2.0_Chr4g0418501' => 'rch', 'RcHm_v2.0_Chr4g0439971' => 'rch', 'RcHm_v2.0_Chr5g0008541' => 'rch', 'RcHm_v2.0_Chr5g0014101' => 'rch', 'RcHm_v2.0_Chr5g0014131' => 'rch', 'RcHm_v2.0_Chr5g0033621' => 'rch', 'RcHm_v2.0_Chr6g0272041' => 'rch', 'RcHm_v2.0_Chr6g0278831' => 'rch', 'Rhsim02G0130400' => 'rsi', 'Rhsim02G0171100' => 'rsi', 'Rhsim05G0053000' => 'rsi', 'Rhsim05G0053100' => 'rsi', 'Rhsim06G0096500' => 'rsi', 'Rhsim06G0096600' => 'rsi', 'Rhsim06G0199100' => 'rsi', 'Rhsim12G0062300' => 'rsi', 'Rhsim12G0062800' => 'rsi', 'Sabra02G0118600' => 'sbr', 'Sabra04G0027300' => 'sbr', 'Sabra04G0119500' => 'sbr', 'Sabra08G0112500' => 'sbr', 'Sabra11G0036800' => 'sbr', 'Sabra11G0103800' => 'sbr', 'Sabra13G0096300' => 'sbr', 'Sabra16G0262300' => 'sbr', 'Sabra18G0091700' => 'sbr', 'Sabra19G0095400' => 'sbr', 'SalBow6G3080' => 'sbo', 'SalBow7G1157' => 'sbo', 'SalBow7G2123' => 'sbo', 'SalBow7G2285' => 'sbo', 'SalBow7G3537' => 'sbo', 'SalBow8G2947' => 'sbo', 'SalBow8G4463' => 'sbo', 'SalBow8G5466' => 'sbo', 'Sc01g0001750' => 'sci', 'Sc02g0006640' => 'sci', 'Sc02g0006670' => 'sci', 'Sc04g0008220' => 'sci', 'Sc05g0006190' => 'sci', 'Sc08g0002760' => 'sci', 'Sc17g0006170' => 'sci', 'Sc22g0002050' => 'sci', 'Sc23g0001190' => 'sci', 'Sc24g0000980' => 'sci', 'Sed0006245' => 'sed', 'Sed0007543' => 'sed', 'Sed0009411' => 'sed', 'Sed0010765' => 'sed', 'Sed0012944' => 'sed', 'Sed0014682' => 'sed', 'Sed0016174' => 'sed', 'Sed0016796' => 'sed', 'Sed0020317' => 'sed', 'Sed0021467' => 'sed', 'SEGI_01316' => 'sgi', 'SEGI_03374' => 'sgi', 'SEGI_16265' => 'sgi', 'SEGI_18569' => 'sgi', 'SEGI_20351' => 'sgi', 'SEGI_26395' => 'sgi', 'SEGI_29469' => 'sgi', 'SEGI_34771' => 'sgi', 'SEGI_36769' => 'sgi', 'SEGI_37139' => 'sgi', 'SGA_v2.0_scaffold100G29687' => 'sas', 'SGA_v2.0_scaffold118G32472' => 'sas', 'SGA_v2.0_scaffold14G07051' => 'sas', 'SGA_v2.0_scaffold183G39845' => 'sas', 'SGA_v2.0_scaffold1G00174' => 'sas', 'SGA_v2.0_scaffold22G09714' => 'sas', 'SGA_v2.0_scaffold333G48992' => 'sas', 'SGA_v2.0_scaffold46G17491' => 'sas', 'SGA_v2.0_scaffold49G18294' => 'sas', 'SGA_v2.0_scaffold63G21658' => 'sas', 'SHI01741' => 'shi', 'SHI05771' => 'shi', 'SHI18077' => 'shi', 'SHI20525' => 'shi', 'SHI20527' => 'shi', 'SHI20528' => 'shi', 'SMO172G0185' => 'smo', 'SMO198G0020' => 'smo', 'SMO351G0006' => 'smo', 'SMO356G0118' => 'smo', 'SMO358G0296' => 'smo', 'SMO367G0079' => 'smo', 'SMO367G1277' => 'smo', 'Solyc01g014220.3' => 'sly', 'Solyc01g111770.2' => 'sly', 'Solyc02g078180.3' => 'sly', 'Solyc03g006430.3' => 'sly', 'Solyc03g006456.1' => 'sly', 'Solyc03g079860.2' => 'sly', 'Solyc04g079770.3' => 'sly', 'Solyc05g007430.4' => 'sly', 'Solyc07g063150.3' => 'sly', 'Solyc08g016620.3' => 'sly', 'Solyc09g057590.3' => 'sly', 'Solyc09g057600.1' => 'sly', 'Solyc10g009050.3' => 'sly', 'Solyc11g017420.2' => 'sly', 'Sopen01g053810' => 'spe', 'Sopen02g023040' => 'spe', 'Sopen03g002440' => 'spe', 'Sopen04g033350' => 'spe', 'Sopen05g003310' => 'spe', 'Sopen07g004050' => 'spe', 'Sopen07g031340' => 'spe', 'Sopen08g006990' => 'spe', 'Sopen10g004830' => 'spe', 'Sopen11g009370' => 'spe', 'Sp1g24450' => 'spa', 'Sp1g29670' => 'spa', 'Sp1g39600' => 'spa', 'Sp2g11080' => 'spa', 'Sp2g13970' => 'spa', 'Sp4g16130' => 'spa', 'Sp6g13080' => 'spa', 'Sp7g37270' => 'spa', 'TAR371G0065' => 'tar', 'TAR376G0340' => 'tar', 'TAR376G0435' => 'tar', 'TAR381G0002' => 'tar', 'TAR381G1236' => 'tar', 'TAR624G0055' => 'tar', 'TAR624G0324' => 'tar', 'TAR624G0696' => 'tar', 'TAR624G0906' => 'tar', 'TAR625G0107' => 'tar', 'TAR626G0015' => 'tar', 'TAR626G1356' => 'tar', 'TAR627G0888' => 'tar', 'TAR628G0399' => 'tar', 'TAR628G1327' => 'tar', 'TAR629G2831' => 'tar', 'TAR629G2874' => 'tar', 'TAR633G1432' => 'tar', 'TAR633G2771' => 'tar', 'THA.LOC104803394' => 'tha', 'THA.LOC104805153' => 'tha', 'THA.LOC104806784' => 'tha', 'THA.LOC104810473' => 'tha', 'THA.LOC104813100' => 'tha', 'THA.LOC104814215' => 'tha', 'THA.LOC104815554' => 'tha', 'THA.LOC104820544' => 'tha', 'THA.LOC104824754' => 'tha', 'THA.LOC104827717' => 'tha', 'Thecc.02G031400' => 'tca', 'Thecc.02G055900' => 'tca', 'Thecc.02G350800' => 'tca', 'Thecc.06G150900' => 'tca', 'Thecc.06G186600' => 'tca', 'Thecc.07G089600' => 'tca', 'Thecc.08G020400' => 'tca', 'Thecc.08G182100' => 'tca', 'Thhalv10000873m.g' => 'esa', 'Thhalv10004185m.g' => 'esa', 'Thhalv10006981m.g' => 'esa', 'Thhalv10007204m.g' => 'esa', 'Thhalv10011374m.g' => 'esa', 'Thhalv10013482m.g' => 'esa', 'Thhalv10017801m.g' => 'esa', 'Thhalv10024983m.g' => 'esa', 'TPR.G12072' => 'tpr', 'TPR.G15769' => 'tpr', 'TPR.G16504' => 'tpr', 'TPR.G16506' => 'tpr', 'TPR.G24345' => 'tpr', 'TPR.G26666' => 'tpr', 'TPR.G27320' => 'tpr', 'TPR.G31819' => 'tpr', 'TPR.G38879' => 'tpr', 'TPR.G39015' => 'tpr', 'TPR.G8819' => 'tpr', 'TWI09G0924' => 'twi', 'TWI12G0811' => 'twi', 'TWI12G1294' => 'twi', 'TWI31G0150' => 'twi', 'TWI36G1262' => 'twi', 'TWI38G1287' => 'twi', 'TWI38G1633' => 'twi', 'TWI38G1982' => 'twi', 'TWI39G0116' => 'twi', 'TWI60G1011' => 'twi', 'TWI63G0171' => 'twi', 'TWI73G0839' => 'twi', 'TWI79G1511' => 'twi', 'unitig_0.g915' => 'ugi', 'unitig_0.g916' => 'ugi', 'unitig_21.g20219' => 'ugi', 'unitig_21.g20416' => 'ugi', 'unitig_578.g16132' => 'ugi', 'unitig_578.g16718' => 'ugi', 'unitig_62.g23481' => 'ugi', 'unitig_744.g24535' => 'ugi', 'unitig_749.g13525' => 'ugi', 'vmacro01248' => 'vma', 'vmacro02290' => 'vma', 'vmacro10946' => 'vma', 'vmacro11865' => 'vma', 'vmacro12493' => 'vma', 'vmacro17322' => 'vma', 'vmacro21599' => 'vma', 'vmacro23041' => 'vma', 'VMungo0251G0004' => 'vmu', 'VMungo0251G2639' => 'vmu', 'VMungo0251G2967' => 'vmu', 'VMungo0540G0864' => 'vmu', 'VMungo0540G1569' => 'vmu', 'VMungo0647G0317' => 'vmu', 'VMungo0720G1373' => 'vmu', 'VMungo0720G1508' => 'vmu', 'VMungo1080G0485' => 'vmu', 'VMungo1215G3177' => 'vmu', 'Zm00001eb112600' => 'zma', 'Zm00001eb120220' => 'zma', 'Zm00001eb153240' => 'zma', 'Zm00001eb168880' => 'zma', 'Zm00001eb213920' => 'zma', 'Zm00001eb228280' => 'zma', 'Zm00001eb254580' => 'zma', 'Zm00001eb272180' => 'zma', 'Zm00001eb293190' => 'zma', 'Zm00001eb322930' => 'zma', 'Zm00001eb353360' => 'zma', 'Zm00001eb353390' => 'zma', 'Zm00001eb353430' => 'zma', 'Zm00001eb353440' => 'zma', 'Zm00001eb353780' => 'zma' ), 'gf_id' => 'HOM05D000499', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000499' ), 'data_identifier' => 'HOM05D000499', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000499', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1066', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p29780' => 'bna', 'A02p33180' => 'bna', 'A03p16470' => 'bna', 'A03p66010' => 'bna', 'A04p25970' => 'bna', 'A06p01270' => 'bna', 'A06p46080' => 'bna', 'A07p11400' => 'bna', 'A08p01840' => 'bna', 'A08p08230' => 'bna', 'A08p25740' => 'bna', 'A09p32070' => 'bna', 'A09p37830' => 'bna', 'A09p42840' => 'bna', 'A09p42850' => 'bna', 'Aa31LG10G2060' => 'aar', 'Aa31LG2G7410' => 'aar', 'Aa31LG6G10200' => 'aar', 'Aa31LG6G16680' => 'aar', 'Aa31LG6G8470' => 'aar', 'Aa31LG9G12730' => 'aar', 'Aa31LG9G13680' => 'aar', 'Aa31LG9G14920' => 'aar', 'Aa31LG9G6650' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4977' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5467' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3254' => 'aag', 'Actinidia02578' => 'ach', 'Actinidia07693' => 'ach', 'Actinidia08413' => 'ach', 'Actinidia08414' => 'ach', 'Actinidia15289' => 'ach', 'Actinidia19871' => 'ach', 'Actinidia21475' => 'ach', 'Actinidia22576' => 'ach', 'Actinidia28327' => 'ach', 'Actinidia32491' => 'ach', 'Actinidia39463' => 'ach', 'Actinidia39571' => 'ach', 'Ah.01g013750' => 'amhyb', 'Ah.01g023210' => 'amhyb', 'Ah.04g164850' => 'amhyb', 'Ah.05g178060' => 'amhyb', 'Ah.07g204270' => 'amhyb', 'Ah.07g208480' => 'amhyb', 'Ah.09g237410' => 'amhyb', 'Ah.14g089460' => 'amhyb', 'AL1G41790' => 'aly', 'AL1G49050' => 'aly', 'AL1G53810' => 'aly', 'AL1G61400' => 'aly', 'AL4G18580' => 'aly', 'AL5G12510' => 'aly', 'AL5G12540' => 'aly', 'AL6G43230' => 'aly', 'AL7G10370' => 'aly', 'AL7G19250' => 'aly', 'AL8G12240' => 'aly', 'AL8G18540' => 'aly', 'Aqoxy1G02409' => 'aox', 'Aqoxy2G03993' => 'aox', 'Aqoxy3G03357' => 'aox', 'Aqoxy4G00785' => 'aox', 'Aqoxy5G02598' => 'aox', 'Aqoxy6G00132' => 'aox', 'Aqoxy7G01776' => 'aox', 'Aqoxy7G02316' => 'aox', 'Aqoxy7G03973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.12AFKW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B8730' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27IQR1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3F75VG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3RE0GA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41TCQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.527VTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FIR39' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5W8UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DA38EV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ63HS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H1I32C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HC27T5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4M8AP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7N3CZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9UVDZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LS1NQA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT1D4B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SKC4TM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCFV76' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF9Q1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQWD9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1ZM88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WE07RT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YCK7VH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJE6Q6' => 'arhy', 'AT1G28240' => 'ath', 'AT1G34550' => 'ath', 'AT1G53040' => 'ath', 'AT2G02910' => 'ath', 'AT4G09630' => 'ath', 'AT4G38500' => 'ath', 'AT5G42660' => 'ath', 'AT5G46220' => 'ath', 'ATR0152G026' => 'atr', 'ATR0564G343' => 'atr', 'ATR0706G151' => 'atr', 'ATR0733G207' => 'atr', 'ATR0751G234' => 'atr', 'ATR0807G048' => 'atr', 'ATR1091G084' => 'atr', 'Atru.chr10.1229' => 'acertr', 'Atru.chr10.1230' => 'acertr', 'Atru.chr10.1874' => 'acertr', 'Atru.chr11.1808' => 'acertr', 'Atru.chr13.1795' => 'acertr', 'Atru.chr13.570' => 'acertr', 'Atru.chr2.2608' => 'acertr', 'Atru.chr2.2609' => 'acertr', 'Atru.chr5.3428' => 'acertr', 'Atru.chr8.1171' => 'acertr', 'AUR62004651' => 'cqu', 'AUR62008675' => 'cqu', 'AUR62010014' => 'cqu', 'AUR62013004' => 'cqu', 'AUR62014825' => 'cqu', 'AUR62015015' => 'cqu', 'AUR62015151' => 'cqu', 'AUR62017020' => 'cqu', 'AUR62019422' => 'cqu', 'AUR62023570' => 'cqu', 'AUR62025571' => 'cqu', 'AUR62029098' => 'cqu', 'AUR62033863' => 'cqu', 'AUR62034296' => 'cqu', 'AUR62040075' => 'cqu', 'BcaB02g07334' => 'bca', 'BcaB02g10575' => 'bca', 'BcaB03g12119' => 'bca', 'BcaB03g12120' => 'bca', 'BcaB03g13945' => 'bca', 'BcaB04g17123' => 'bca', 'BcaB04g17867' => 'bca', 'BcaB04g19839' => 'bca', 'BcaB07g30317' => 'bca', 'BcaB07g32432' => 'bca', 'BcaB07g33362' => 'bca', 'BcaB08g36611' => 'bca', 'BcaC01g00028' => 'bca', 'BcaC01g01356' => 'bca', 'BcaC01g02034' => 'bca', 'BcaC01g06051' => 'bca', 'BcaC03g16839' => 'bca', 'BcaC03g17176' => 'bca', 'BcaC05g26829' => 'bca', 'BcaC06g31490' => 'bca', 'BcaC06g35344' => 'bca', 'BcaC06g36570' => 'bca', 'BcaC07g37537' => 'bca', 'BcaC08g43491' => 'bca', 'BcaC08g43773' => 'bca', 'BcaNung00234' => 'bca', 'BcaNung01982' => 'bca', 'BcaNung03707' => 'bca', 'BcaNung06454' => 'bca', 'BolC2t10762H' => 'bol', 'BolC2t11191H' => 'bol', 'BolC3t14322H' => 'bol', 'BolC3t19747H' => 'bol', 'BolC3t21425H' => 'bol', 'BolC4t27800H' => 'bol', 'BolC5t31423H' => 'bol', 'BolC6t35951H' => 'bol', 'BolC6t36282H' => 'bol', 'BolC7t40678H' => 'bol', 'BolC7t40679H' => 'bol', 'BolC7t42222H' => 'bol', 'BolC7t43492H' => 'bol', 'BolC7t46785H' => 'bol', 'BolC8t47853H' => 'bol', 'BolC9t56805H' => 'bol', 'BraA02t08000Z' => 'bra', 'BraA02t08341Z' => 'bra', 'BraA03t10936Z' => 'bra', 'BraA03t15657Z' => 'bra', 'BraA04t18100Z' => 'bra', 'BraA05t20523Z' => 'bra', 'BraA06t23353Z' => 'bra', 'BraA06t27473Z' => 'bra', 'BraA06t27769Z' => 'bra', 'BraA07t28928Z' => 'bra', 'BraA08t32236Z' => 'bra', 'BraA08t32841Z' => 'bra', 'BraA08t34524Z' => 'bra', 'BraA09t38742Z' => 'bra', 'BraA09t39295Z' => 'bra', 'C02p47180' => 'bna', 'C02p50990' => 'bna', 'C03p19360' => 'bna', 'C03p74950' => 'bna', 'C03p91000' => 'bna', 'C04p63260' => 'bna', 'C05p27050' => 'bna', 'C06p08750' => 'bna', 'C06p11490' => 'bna', 'C07p02820' => 'bna', 'C07p17180' => 'bna', 'C07p29440' => 'bna', 'C07p63730' => 'bna', 'C09p39260' => 'bna', 'CAN.G1164.34' => 'can', 'CAN.G1164.39' => 'can', 'CAN.G1530.3' => 'can', 'CAN.G162.61' => 'can', 'CAN.G176.6' => 'can', 'CAN.G289.49' => 'can', 'CAN.G370.21' => 'can', 'CAN.G370.22' => 'can', 'CAN.G371.117' => 'can', 'CAN.G58.37' => 'can', 'CAN.G588.98' => 'can', 'CANSAT21G2266' => 'cansat', 'CANSAT25G2799' => 'cansat', 'CANSAT35G0862' => 'cansat', 'CANSAT35G1704' => 'cansat', 'CANSAT35G1760' => 'cansat', 'CANSAT56G3971' => 'cansat', 'CANSAT56G4116' => 'cansat', 'CANSAT80G1259' => 'cansat', 'CARHR027730' => 'chi', 'CARHR033880' => 'chi', 'CARHR043270' => 'chi', 'CARHR145330' => 'chi', 'CARHR145340' => 'chi', 'CARHR175570' => 'chi', 'CARHR181570' => 'chi', 'CARHR258470' => 'chi', 'CARHR260490' => 'chi', 'CARHR294220' => 'chi', 'Carub.0001s2668' => 'cru', 'Carub.0001s3257' => 'cru', 'Carub.0001s4220' => 'cru', 'Carub.0005s0179' => 'cru', 'Carub.0006s2807' => 'cru', 'Carub.0007s0039' => 'cru', 'Carub.0008s0169' => 'cru', 'Carub.0008s0636' => 'cru', 'Ca_00338_v3' => 'car', 'Ca_00542_v3' => 'car', 'Ca_01844_v3' => 'car', 'Ca_10611_v3' => 'car', 'Ca_13326_v3' => 'car', 'Ca_17944_v3' => 'car', 'Ca_18546_v3' => 'car', 'Ca_24219_v3' => 'car', 'Ca_29972_v3' => 'car', 'CBR_g3681' => 'cbr', 'CBR_g40021' => 'cbr', 'Cc01_g08140' => 'ccan', 'Cc02_g13410' => 'ccan', 'Cc02_g37480' => 'ccan', 'Cc05_g12030' => 'ccan', 'Cc09_g03370' => 'ccan', 'Cc09_g10300' => 'ccan', 'Cc10_g03530' => 'ccan', 'Cc10_g11380' => 'ccan', 'CDE01G0176' => 'cde', 'CDE02G0675' => 'cde', 'CDE02G0942' => 'cde', 'CDE02G1153' => 'cde', 'CDE02G4177' => 'cde', 'CDE04G2117' => 'cde', 'CDE04G2736' => 'cde', 'CDE08G1161' => 'cde', 'CDE09G1238' => 'cde', 'Cfa000467' => 'cfa', 'Cfa000947' => 'cfa', 'Cfa004969' => 'cfa', 'Cfa005284' => 'cfa', 'Cfa008993' => 'cfa', 'Cfa018187' => 'cfa', 'Cfa018454' => 'cfa', 'Cfa020585' => 'cfa', 'Ciclev10000424m.g' => 'ccl', 'Ciclev10003605m.g' => 'ccl', 'Ciclev10007828m.g' => 'ccl', 'Ciclev10014620m.g' => 'ccl', 'Ciclev10015169m.g' => 'ccl', 'Ciclev10018291m.g' => 'ccl', 'Ciclev10028256m.g' => 'ccl', 'Ciclev10033822m.g' => 'ccl', 'CiPaw.05G060300' => 'cil', 'CiPaw.05G085000' => 'cil', 'CiPaw.06G083700' => 'cil', 'CiPaw.06G120300' => 'cil', 'CiPaw.09G060500' => 'cil', 'CiPaw.09G123800' => 'cil', 'CiPaw.11G169700' => 'cil', 'CiPaw.12G118300' => 'cil', 'CiPaw.15G071000' => 'cil', 'CiPaw.15G081900' => 'cil', 'ClCG01G024610' => 'cla', 'ClCG03G006070' => 'cla', 'ClCG05G019250' => 'cla', 'ClCG09G009500' => 'cla', 'ClCG11G008200' => 'cla', 'ClCG11G018080' => 'cla', 'COL.COLO4_17373' => 'col', 'COL.COLO4_22994' => 'col', 'COL.COLO4_26389' => 'col', 'COL.COLO4_27170' => 'col', 'COL.COLO4_31074' => 'col', 'COL.COLO4_31465' => 'col', 'COL.COLO4_36438' => 'col', 'COL.COLO4_36439' => 'col', 'Cpa.g.c38781' => 'cpa', 'Cpa.g.sc128.12' => 'cpa', 'Cpa.g.sc166.7' => 'cpa', 'Cpa.g.sc166.8' => 'cpa', 'Cpa.g.sc20.111' => 'cpa', 'Cpa.g.sc27.31' => 'cpa', 'Cpa.g.sc64.36' => 'cpa', 'Cpa.g.sc64.37' => 'cpa', 'Cpa.g.sc66.49' => 'cpa', 'Cpa.g.sc80.64' => 'cpa', 'CsaV3_1G012320' => 'csa', 'CsaV3_2G008480' => 'csa', 'CsaV3_2G033450' => 'csa', 'CsaV3_3G044830' => 'csa', 'CsaV3_4G033710' => 'csa', 'CsaV3_6G051730' => 'csa', 'CsaV3_7G025350' => 'csa', 'CSS0001067' => 'camsi', 'CSS0005996' => 'camsi', 'CSS0006590' => 'camsi', 'CSS0009673' => 'camsi', 'CSS0010201' => 'camsi', 'CSS0010549' => 'camsi', 'CSS0011364' => 'camsi', 'CSS0014473' => 'camsi', 'CSS0014961' => 'camsi', 'CSS0020191' => 'camsi', 'CSS0021165' => 'camsi', 'CSS0022306' => 'camsi', 'CSS0030591' => 'camsi', 'CSS0030696' => 'camsi', 'CSS0032653' => 'camsi', 'CSS0037487' => 'camsi', 'CSS0041102' => 'camsi', 'CSS0041261' => 'camsi', 'CSS0046246' => 'camsi', 'CSS0049256' => 'camsi', 'DCAR_004075' => 'dca', 'DCAR_011538' => 'dca', 'DCAR_019553' => 'dca', 'DCAR_020952' => 'dca', 'DCAR_021739' => 'dca', 'DCAR_027407' => 'dca', 'DCAR_027913' => 'dca', 'DCAR_028066' => 'dca', 'Dinv05899' => 'din', 'Dinv07563' => 'din', 'Dinv08010' => 'din', 'Dinv14125' => 'din', 'Dinv20172' => 'din', 'Dinv30743' => 'din', 'Dinv31229' => 'din', 'Dinv34162' => 'din', 'Dinv36028' => 'din', 'Dinv39368' => 'din', 'Dinv40565' => 'din', 'Dinv41706' => 'din', 'Duzib052G0089' => 'dzi', 'Duzib116G0641' => 'dzi', 'Duzib132G0069' => 'dzi', 'Duzib132G1219' => 'dzi', 'Duzib147G0278' => 'dzi', 'Duzib160G0480' => 'dzi', 'Duzib170G0661' => 'dzi', 'Duzib177G0591' => 'dzi', 'Duzib187G1353' => 'dzi', 'Duzib192G0858' => 'dzi', 'Duzib192G0883' => 'dzi', 'Duzib213G0506' => 'dzi', 'Duzib235G0289' => 'dzi', 'Duzib251G0422' => 'dzi', 'ECA232G3898' => 'eca', 'ECA233G5950' => 'eca', 'ECA234G1699' => 'eca', 'ECA234G2421' => 'eca', 'ECA236G0426' => 'eca', 'ECA236G4331' => 'eca', 'ECA248G2573' => 'eca', 'EL10Ac1g00077' => 'bvu', 'EL10Ac1g01746' => 'bvu', 'EL10Ac2g03464' => 'bvu', 'EL10Ac4g08176' => 'bvu', 'EL10Ac7g17521' => 'bvu', 'EL10Ac8g20386' => 'bvu', 'EL10Ac9g21343' => 'bvu', 'EL10Ac9g22688' => 'bvu', 'Eucgr.B03434' => 'egr', 'Eucgr.D00618' => 'egr', 'Eucgr.E02395' => 'egr', 'Eucgr.F01129' => 'egr', 'Eucgr.F02622' => 'egr', 'Eucgr.F04207' => 'egr', 'FAN01G0570' => 'fan', 'FAN03G3351' => 'fan', 'FAN06G3702' => 'fan', 'FAN07G2149' => 'fan', 'FAN10G3758' => 'fan', 'FAN11G1170' => 'fan', 'FAN11G2050' => 'fan', 'FAN11G2724' => 'fan', 'FAN12G1700' => 'fan', 'FAN12G2028' => 'fan', 'FAN15G1160' => 'fan', 'FAN15G3063' => 'fan', 'FAN16G2540' => 'fan', 'FAN16G3077' => 'fan', 'FAN16G3624' => 'fan', 'FAN17G0221' => 'fan', 'FAN20G2492' => 'fan', 'FAN20G2905' => 'fan', 'FAN21G0548' => 'fan', 'FAN21G1300' => 'fan', 'FAN22G0077' => 'fan', 'FAN22G1315' => 'fan', 'FAN24G1280' => 'fan', 'FAN24G1445' => 'fan', 'FAN24G3527' => 'fan', 'FAN25G0464' => 'fan', 'FAN25G2885' => 'fan', 'FAN25G3270' => 'fan', 'FAN27G1101' => 'fan', 'FAN27G2846' => 'fan', 'FAN27G3524' => 'fan', 'FvH4_2g11770' => 'fve', 'FvH4_2g15630' => 'fve', 'FvH4_3g05570' => 'fve', 'FvH4_3g09110' => 'fve', 'FvH4_3g19940' => 'fve', 'FvH4_4g04821' => 'fve', 'FvH4_4g31480' => 'fve', 'FvH4_7g01740' => 'fve', 'Glyma.05G130400' => 'gma', 'Glyma.05G156400' => 'gma', 'Glyma.07G197000' => 'gma', 'Glyma.08G085151' => 'gma', 'Glyma.08G114500' => 'gma', 'Glyma.08G300400' => 'gma', 'Glyma.10G215800' => 'gma', 'Glyma.12G224400' => 'gma', 'Glyma.13G179300' => 'gma', 'Glyma.13G218151' => 'gma', 'Glyma.13G238800' => 'gma', 'Glyma.13G276900' => 'gma', 'Glyma.14G078200' => 'gma', 'Glyma.15G074500' => 'gma', 'Glyma.15G094100' => 'gma', 'Glyma.17G247200' => 'gma', 'Glyma.18G120100' => 'gma', 'Glyma.20G176000' => 'gma', 'Gohir.A01G063600' => 'ghi', 'Gohir.A01G170301' => 'ghi', 'Gohir.A02G060500' => 'ghi', 'Gohir.A05G133850' => 'ghi', 'Gohir.A05G161400' => 'ghi', 'Gohir.A06G012900' => 'ghi', 'Gohir.A06G035901' => 'ghi', 'Gohir.A06G127100' => 'ghi', 'Gohir.A06G210500' => 'ghi', 'Gohir.A08G008650' => 'ghi', 'Gohir.A09G072700' => 'ghi', 'Gohir.A09G088301' => 'ghi', 'Gohir.A10G040600' => 'ghi', 'Gohir.A12G036300' => 'ghi', 'Gohir.A12G143350' => 'ghi', 'Gohir.A12G165500' => 'ghi', 'Gohir.A13G145700' => 'ghi', 'Gohir.D01G050000' => 'ghi', 'Gohir.D01G051366' => 'ghi', 'Gohir.D01G161350' => 'ghi', 'Gohir.D02G065900' => 'ghi', 'Gohir.D05G164200' => 'ghi', 'Gohir.D05G355500' => 'ghi', 'Gohir.D06G010400' => 'ghi', 'Gohir.D06G111250' => 'ghi', 'Gohir.D06G132000' => 'ghi', 'Gohir.D06G210500' => 'ghi', 'Gohir.D07G165675' => 'ghi', 'Gohir.D08G062240' => 'ghi', 'Gohir.D08G086101' => 'ghi', 'Gohir.D08G138060' => 'ghi', 'Gohir.D09G072300' => 'ghi', 'Gohir.D10G041400' => 'ghi', 'Gohir.D11G191020' => 'ghi', 'Gohir.D11G212066' => 'ghi', 'Gohir.D12G036300' => 'ghi', 'Gohir.D12G168600' => 'ghi', 'Gohir.D13G150600' => 'ghi', 'Gorai.001G057300' => 'gra', 'Gorai.002G069900' => 'gra', 'Gorai.002G200000' => 'gra', 'Gorai.003G067600' => 'gra', 'Gorai.005G074800' => 'gra', 'Gorai.006G087300' => 'gra', 'Gorai.008G037500' => 'gra', 'Gorai.008G181400' => 'gra', 'Gorai.009G169400' => 'gra', 'Gorai.009G387900' => 'gra', 'Gorai.010G013300' => 'gra', 'Gorai.010G153800' => 'gra', 'Gorai.010G255800' => 'gra', 'Gorai.011G043700' => 'gra', 'Gorai.011G198900' => 'gra', 'Gorai.013G168400' => 'gra', 'GSVIVG01005212001' => 'vvi', 'GSVIVG01006163001' => 'vvi', 'GSVIVG01009625001' => 'vvi', 'GSVIVG01014338001' => 'vvi', 'GSVIVG01020005001' => 'vvi', 'GSVIVG01021450001' => 'vvi', 'GSVIVG01023975001' => 'vvi', 'GSVIVG01034490001' => 'vvi', 'HanXRQChr04g0112071' => 'han', 'HanXRQChr05g0131151' => 'han', 'HanXRQChr09g0262371' => 'han', 'HanXRQChr09g0268401' => 'han', 'HanXRQChr10g0279241' => 'han', 'HanXRQChr10g0297961' => 'han', 'HanXRQChr11g0326231' => 'han', 'HanXRQChr11g0328471' => 'han', 'HanXRQChr16g0507941' => 'han', 'HanXRQChr17g0560211' => 'han', 'Haze_02108' => 'cav', 'Haze_02428' => 'cav', 'Haze_05593' => 'cav', 'Haze_06448' => 'cav', 'Haze_09427' => 'cav', 'Haze_12022' => 'cav', 'Haze_17612' => 'cav', 'Haze_17928' => 'cav', 'Hma1.2p1_0032F.1_g019250' => 'hma', 'Hma1.2p1_0163F.1_g072690' => 'hma', 'Hma1.2p1_0265F.1_g106710' => 'hma', 'Hma1.2p1_0286F.1_g113970' => 'hma', 'Hma1.2p1_0363F.1_g136640' => 'hma', 'Hma1.2p1_0584F.1_g183470' => 'hma', 'Hma1.2p1_0885F.1_g232570' => 'hma', 'HPP92_006022' => 'vpl', 'HPP92_007320' => 'vpl', 'HPP92_011521' => 'vpl', 'HPP92_019387' => 'vpl', 'HPP92_024038' => 'vpl', 'Hund05891' => 'sun', 'Hund06450' => 'sun', 'Hund12053' => 'sun', 'Hund16800' => 'sun', 'Hund21222' => 'sun', 'Hund22896' => 'sun', 'Hund23746' => 'sun', 'Hund27083' => 'sun', 'Lalb_Chr02g0141831' => 'lal', 'Lalb_Chr02g0141841' => 'lal', 'Lalb_Chr05g0220411' => 'lal', 'Lalb_Chr06g0162081' => 'lal', 'Lalb_Chr09g0327651' => 'lal', 'Lalb_Chr13g0295051' => 'lal', 'Lalb_Chr15g0086801' => 'lal', 'Lalb_Chr16g0383781' => 'lal', 'Lalb_Chr16g0383791' => 'lal', 'Lalb_Chr18g0055441' => 'lal', 'Lalb_Chr18g0059611' => 'lal', 'Lalb_Chr20g0109661' => 'lal', 'Lalb_Chr20g0109831' => 'lal', 'Lalb_Chr20g0121871' => 'lal', 'Lalb_Chr22g0355361' => 'lal', 'Lalb_Chr25g0286371' => 'lal', 'Lj1A1187G43' => 'lonja', 'Lj1A1205T50' => 'lonja', 'Lj1A800G33' => 'lonja', 'Lj1C1187T7' => 'lonja', 'Lj1C843T11' => 'lonja', 'Lj1g0010940' => 'lja', 'Lj2A288T69' => 'lonja', 'Lj3g0024276' => 'lja', 'Lj4A47T76' => 'lonja', 'Lj4g0005805' => 'lja', 'Lj4g0006097' => 'lja', 'Lj4g0008528' => 'lja', 'Lj4g0024907' => 'lja', 'Lj5g0012472' => 'lja', 'Lj5g0018648' => 'lja', 'Lj6C789G1' => 'lonja', 'Lj6g0004000' => 'lja', 'Lj7A292G67' => 'lonja', 'Lj7A292T64' => 'lonja', 'Lj9A400T58' => 'lonja', 'Lsat_1_v5_gn_1_126181' => 'lsa', 'Lsat_1_v5_gn_4_123041' => 'lsa', 'Lsat_1_v5_gn_4_133620' => 'lsa', 'Lsat_1_v5_gn_4_53221' => 'lsa', 'Lsat_1_v5_gn_4_71961' => 'lsa', 'Lsat_1_v5_gn_7_105241' => 'lsa', 'Lsat_1_v5_gn_7_21361' => 'lsa', 'Lsat_1_v5_gn_7_28860' => 'lsa', 'Lsat_1_v5_gn_7_31260' => 'lsa', 'Lsat_1_v5_gn_8_52801' => 'lsa', 'Manes.02G191400' => 'mes', 'Manes.03G110100' => 'mes', 'Manes.04G071100' => 'mes', 'Manes.05G100500' => 'mes', 'Manes.05G164700' => 'mes', 'Manes.15G087000' => 'mes', 'Manes.15G121500' => 'mes', 'Manes.16G028300' => 'mes', 'Manes.17G046100' => 'mes', 'Manes.17G069800' => 'mes', 'Manes.18G100500' => 'mes', 'Mapoly0002s0109' => 'mpo', 'Mapoly0024s0007' => 'mpo', 'Mapoly0089s0032' => 'mpo', 'MBI04_g42241_MAGBIO' => 'mbi', 'MBI05_g11988_MAGBIO' => 'mbi', 'MBI05_g35452_MAGBIO' => 'mbi', 'MBI07_g30179_MAGBIO' => 'mbi', 'MBI07_g35859_MAGBIO' => 'mbi', 'MBI07_g35860_MAGBIO' => 'mbi', 'MBI07_g37166_MAGBIO' => 'mbi', 'MBI08_g18172_MAGBIO' => 'mbi', 'MBI09_g08441_MAGBIO' => 'mbi', 'MBI13_g01676_MAGBIO' => 'mbi', 'MBI14_g42955_MAGBIO' => 'mbi', 'MBI16_g13161_MAGBIO' => 'mbi', 'MBI17_g27204_MAGBIO' => 'mbi', 'MBI19_g21595_MAGBIO' => 'mbi', 'MD00G1148400' => 'mdo', 'MD02G1301200' => 'mdo', 'MD03G1227800' => 'mdo', 'MD05G1041100' => 'mdo', 'MD05G1124800' => 'mdo', 'MD05G1284000' => 'mdo', 'MD05G1338800' => 'mdo', 'MD05G1338900' => 'mdo', 'MD07G1022800' => 'mdo', 'MD10G1047500' => 'mdo', 'MD10G1127500' => 'mdo', 'MD10G1262300' => 'mdo', 'MD10G1293800' => 'mdo', 'MD16G1074300' => 'mdo', 'Medtr1g021670' => 'mtr', 'Medtr1g096320' => 'mtr', 'Medtr2g013690' => 'mtr', 'Medtr2g019450' => 'mtr', 'Medtr2g085170' => 'mtr', 'Medtr4g088785' => 'mtr', 'Medtr8g055930' => 'mtr', 'Medtr8g085850' => 'mtr', 'MELO3C002605.2' => 'cme', 'MELO3C003891.2' => 'cme', 'MELO3C004012.2' => 'cme', 'MELO3C007134.2' => 'cme', 'MELO3C008118.2' => 'cme', 'MELO3C016700.2' => 'cme', 'MELO3C024127.2' => 'cme', 'MELO3C033361.2' => 'cme', 'MELO3C033362.2' => 'cme', 'Migut.C00430' => 'egut', 'Migut.C01246' => 'egut', 'Migut.E00101' => 'egut', 'Migut.H01486' => 'egut', 'Migut.H01939' => 'egut', 'Migut.K00360' => 'egut', 'Migut.M00910' => 'egut', 'Migut.M01139' => 'egut', 'Migut.N02677' => 'egut', 'MSTRG.13252' => 'ama', 'MSTRG.14701' => 'ama', 'MSTRG.1521' => 'ama', 'MSTRG.15884' => 'ama', 'MSTRG.16242' => 'ama', 'MSTRG.22285' => 'ama', 'MSTRG.22444' => 'ama', 'MSTRG.2349' => 'ama', 'MSTRG.26308' => 'ama', 'MSTRG.28296' => 'ama', 'MSTRG.9895' => 'ama', 'Nitab4.5_0000110g0060' => 'nta', 'Nitab4.5_0000420g0130' => 'nta', 'Nitab4.5_0000422g0030' => 'nta', 'Nitab4.5_0000560g0180' => 'nta', 'Nitab4.5_0000703g0100' => 'nta', 'Nitab4.5_0000786g0200' => 'nta', 'Nitab4.5_0001336g0020' => 'nta', 'Nitab4.5_0001796g0030' => 'nta', 'Nitab4.5_0003348g0060' => 'nta', 'Nitab4.5_0003698g0040' => 'nta', 'Nitab4.5_0003942g0090' => 'nta', 'Nitab4.5_0004775g0070' => 'nta', 'Nitab4.5_0004864g0030' => 'nta', 'Nitab4.5_0005615g0020' => 'nta', 'Nitab4.5_0009288g0030' => 'nta', 'Nitab4.5_0009341g0010' => 'nta', 'Nitab4.5_0009535g0010' => 'nta', 'Nn1g03995' => 'nnu', 'Nn1g04100' => 'nnu', 'Nn1g06530' => 'nnu', 'Nn3g16404' => 'nnu', 'Nn3g17212' => 'nnu', 'Nn3g20776' => 'nnu', 'Nn3g21923' => 'nnu', 'Nn5g27737' => 'nnu', 'Nn5g29461' => 'nnu', 'Nn7g38355' => 'nnu', 'Nn8g39873' => 'nnu', 'Oeu000548.2' => 'oeu', 'Oeu004672.1' => 'oeu', 'Oeu015605.2' => 'oeu', 'Oeu016092.1' => 'oeu', 'Oeu017879.3' => 'oeu', 'Oeu024910.1' => 'oeu', 'Oeu028965.1' => 'oeu', 'Oeu031269.1' => 'oeu', 'Oeu031270.1' => 'oeu', 'Oeu032535.1' => 'oeu', 'Oeu034151.1' => 'oeu', 'Oeu034152.1' => 'oeu', 'Oeu034588.2' => 'oeu', 'Oeu050846.1' => 'oeu', 'Oeu050849.2' => 'oeu', 'Oeu051063.2' => 'oeu', 'Oeu052368.1' => 'oeu', 'Oeu052370.1' => 'oeu', 'Os01g0210400' => 'osa', 'Os01g0304300' => 'osa', 'Os01g0749100' => 'osa', 'Os02g0745800' => 'osa', 'Os03g0769050' => 'osa', 'Os05g0531500' => 'osa', 'Os06g0724300' => 'osa', 'Os11g0198100' => 'osa', 'Peaxi162Scf00069g01425' => 'pax', 'Peaxi162Scf00280g00811' => 'pax', 'Peaxi162Scf00310g00615' => 'pax', 'Peaxi162Scf00362g00542' => 'pax', 'Peaxi162Scf00461g00310' => 'pax', 'Peaxi162Scf00530g00118' => 'pax', 'Peaxi162Scf00541g00057' => 'pax', 'Peaxi162Scf00661g00017' => 'pax', 'Peaxi162Scf00926g00027' => 'pax', 'Peaxi162Scf01064g00263' => 'pax', 'Peaxi162Scf01211g00135' => 'pax', 'PGR004G2336' => 'pgr', 'PGR042G0327' => 'pgr', 'PGR042G1957' => 'pgr', 'PGR042G2003' => 'pgr', 'PGR042G3929' => 'pgr', 'PGR083G1137' => 'pgr', 'PGR083G1364' => 'pgr', 'PGSC0003DMG400003381' => 'stu', 'PGSC0003DMG400003417' => 'stu', 'PGSC0003DMG400008981' => 'stu', 'PGSC0003DMG400012417' => 'stu', 'PGSC0003DMG400012823' => 'stu', 'PGSC0003DMG400016885' => 'stu', 'PGSC0003DMG400022812' => 'stu', 'PGSC0003DMG400029726' => 'stu', 'PGSC0003DMG401009243' => 'stu', 'PGSC0003DMG401031505' => 'stu', 'PGSC0003DMG402031505' => 'stu', 'Phvul.001G017600' => 'pvu', 'Phvul.002G193500' => 'pvu', 'Phvul.002G228900' => 'pvu', 'Phvul.002G236800' => 'pvu', 'Phvul.003G049500' => 'pvu', 'Phvul.005G072000' => 'pvu', 'Phvul.006G164800' => 'pvu', 'Phvul.006G185100' => 'pvu', 'Phvul.007G090000' => 'pvu', 'Potri.001G399800' => 'ptr', 'Potri.002G149900' => 'ptr', 'Potri.004G044100' => 'ptr', 'Potri.004G177600' => 'ptr', 'Potri.009G138000' => 'ptr', 'Potri.010G094000' => 'ptr', 'Potri.011G053000' => 'ptr', 'Potri.011G119300' => 'ptr', 'Potri.013G113700' => 'ptr', 'Potri.018G107800' => 'ptr', 'Potri.019G084100' => 'ptr', 'Pp3c14_23720' => 'ppa', 'Pp3c16_6340' => 'ppa', 'Pp3c23_13420' => 'ppa', 'Pp3c24_2740' => 'ppa', 'Pp3c25_860' => 'ppa', 'Pp3c8_21750' => 'ppa', 'Prupe.1G273000' => 'ppe', 'Prupe.1G273700' => 'ppe', 'Prupe.1G274100' => 'ppe', 'Prupe.2G023300' => 'ppe', 'Prupe.4G048000' => 'ppe', 'Prupe.4G080400' => 'ppe', 'Prupe.4G181200' => 'ppe', 'Prupe.8G056900' => 'ppe', 'Prupe.8G168700' => 'ppe', 'Psat1g189080' => 'psa', 'Psat1g204760' => 'psa', 'Psat4g175560' => 'psa', 'Psat4g177720' => 'psa', 'Psat5g244240' => 'psa', 'Psat6g010720' => 'psa', 'Psat6g187200' => 'psa', 'Psat7g072040' => 'psa', 'PSO017G3501' => 'pso', 'PSO063G2148' => 'pso', 'PSO063G5608' => 'pso', 'PSO210G6392' => 'pso', 'PSO541G2319' => 'pso', 'PSO541G2836' => 'pso', 'PSO541G4012' => 'pso', 'PSO541G6253' => 'pso', 'PSO675G0580' => 'pso', 'PSO675G0856' => 'pso', 'PSO675G5635' => 'pso', 'PSO675G9157' => 'pso', 'PSO832G1660' => 'pso', 'PSO832G1969' => 'pso', 'QL02p007186' => 'qlo', 'QL02p033904' => 'qlo', 'QL03p064391' => 'qlo', 'QL05p040593' => 'qlo', 'QL05p058242' => 'qlo', 'QL08p021825' => 'qlo', 'QL11p004981' => 'qlo', 'RcHm_v2.0_Chr1g0318301' => 'rch', 'RcHm_v2.0_Chr4g0418501' => 'rch', 'RcHm_v2.0_Chr4g0439971' => 'rch', 'RcHm_v2.0_Chr5g0008541' => 'rch', 'RcHm_v2.0_Chr5g0014101' => 'rch', 'RcHm_v2.0_Chr5g0014131' => 'rch', 'RcHm_v2.0_Chr5g0033621' => 'rch', 'RcHm_v2.0_Chr6g0272041' => 'rch', 'RcHm_v2.0_Chr6g0278831' => 'rch', 'Rhsim02G0130400' => 'rsi', 'Rhsim02G0171100' => 'rsi', 'Rhsim05G0053000' => 'rsi', 'Rhsim05G0053100' => 'rsi', 'Rhsim06G0096500' => 'rsi', 'Rhsim06G0096600' => 'rsi', 'Rhsim06G0199100' => 'rsi', 'Rhsim12G0062300' => 'rsi', 'Rhsim12G0062800' => 'rsi', 'Sabra02G0118600' => 'sbr', 'Sabra04G0027300' => 'sbr', 'Sabra04G0119500' => 'sbr', 'Sabra08G0112500' => 'sbr', 'Sabra11G0036800' => 'sbr', 'Sabra11G0103800' => 'sbr', 'Sabra13G0096300' => 'sbr', 'Sabra16G0262300' => 'sbr', 'Sabra18G0091700' => 'sbr', 'Sabra19G0095400' => 'sbr', 'SalBow6G3080' => 'sbo', 'SalBow7G1157' => 'sbo', 'SalBow7G2123' => 'sbo', 'SalBow7G2285' => 'sbo', 'SalBow7G3537' => 'sbo', 'SalBow8G2947' => 'sbo', 'SalBow8G4463' => 'sbo', 'SalBow8G5466' => 'sbo', 'Sc01g0001750' => 'sci', 'Sc02g0006640' => 'sci', 'Sc02g0006670' => 'sci', 'Sc04g0008220' => 'sci', 'Sc05g0006190' => 'sci', 'Sc08g0002760' => 'sci', 'Sc17g0006170' => 'sci', 'Sc22g0002050' => 'sci', 'Sc23g0001190' => 'sci', 'Sc24g0000980' => 'sci', 'Sed0006245' => 'sed', 'Sed0007543' => 'sed', 'Sed0009411' => 'sed', 'Sed0010765' => 'sed', 'Sed0012944' => 'sed', 'Sed0014682' => 'sed', 'Sed0016174' => 'sed', 'Sed0016796' => 'sed', 'Sed0020317' => 'sed', 'Sed0021467' => 'sed', 'SEGI_01316' => 'sgi', 'SEGI_03374' => 'sgi', 'SEGI_16265' => 'sgi', 'SEGI_18569' => 'sgi', 'SEGI_20351' => 'sgi', 'SEGI_26395' => 'sgi', 'SEGI_29469' => 'sgi', 'SEGI_34771' => 'sgi', 'SEGI_36769' => 'sgi', 'SEGI_37139' => 'sgi', 'SGA_v2.0_scaffold100G29687' => 'sas', 'SGA_v2.0_scaffold118G32472' => 'sas', 'SGA_v2.0_scaffold14G07051' => 'sas', 'SGA_v2.0_scaffold183G39845' => 'sas', 'SGA_v2.0_scaffold1G00174' => 'sas', 'SGA_v2.0_scaffold22G09714' => 'sas', 'SGA_v2.0_scaffold333G48992' => 'sas', 'SGA_v2.0_scaffold46G17491' => 'sas', 'SGA_v2.0_scaffold49G18294' => 'sas', 'SGA_v2.0_scaffold63G21658' => 'sas', 'SHI01741' => 'shi', 'SHI05771' => 'shi', 'SHI18077' => 'shi', 'SHI20525' => 'shi', 'SHI20527' => 'shi', 'SHI20528' => 'shi', 'SMO172G0185' => 'smo', 'SMO198G0020' => 'smo', 'SMO351G0006' => 'smo', 'SMO356G0118' => 'smo', 'SMO358G0296' => 'smo', 'SMO367G0079' => 'smo', 'SMO367G1277' => 'smo', 'Solyc01g014220.3' => 'sly', 'Solyc01g111770.2' => 'sly', 'Solyc02g078180.3' => 'sly', 'Solyc03g006430.3' => 'sly', 'Solyc03g006456.1' => 'sly', 'Solyc03g079860.2' => 'sly', 'Solyc04g079770.3' => 'sly', 'Solyc05g007430.4' => 'sly', 'Solyc07g063150.3' => 'sly', 'Solyc08g016620.3' => 'sly', 'Solyc09g057590.3' => 'sly', 'Solyc09g057600.1' => 'sly', 'Solyc10g009050.3' => 'sly', 'Solyc11g017420.2' => 'sly', 'Sopen01g053810' => 'spe', 'Sopen02g023040' => 'spe', 'Sopen03g002440' => 'spe', 'Sopen04g033350' => 'spe', 'Sopen05g003310' => 'spe', 'Sopen07g004050' => 'spe', 'Sopen07g031340' => 'spe', 'Sopen08g006990' => 'spe', 'Sopen10g004830' => 'spe', 'Sopen11g009370' => 'spe', 'Sp1g24450' => 'spa', 'Sp1g29670' => 'spa', 'Sp1g39600' => 'spa', 'Sp2g11080' => 'spa', 'Sp2g13970' => 'spa', 'Sp4g16130' => 'spa', 'Sp6g13080' => 'spa', 'Sp7g37270' => 'spa', 'TAR371G0065' => 'tar', 'TAR376G0340' => 'tar', 'TAR376G0435' => 'tar', 'TAR381G0002' => 'tar', 'TAR381G1236' => 'tar', 'TAR624G0055' => 'tar', 'TAR624G0324' => 'tar', 'TAR624G0696' => 'tar', 'TAR624G0906' => 'tar', 'TAR625G0107' => 'tar', 'TAR626G0015' => 'tar', 'TAR626G1356' => 'tar', 'TAR627G0888' => 'tar', 'TAR628G0399' => 'tar', 'TAR628G1327' => 'tar', 'TAR629G2831' => 'tar', 'TAR629G2874' => 'tar', 'TAR633G1432' => 'tar', 'TAR633G2771' => 'tar', 'THA.LOC104803394' => 'tha', 'THA.LOC104805153' => 'tha', 'THA.LOC104806784' => 'tha', 'THA.LOC104810473' => 'tha', 'THA.LOC104813100' => 'tha', 'THA.LOC104814215' => 'tha', 'THA.LOC104815554' => 'tha', 'THA.LOC104820544' => 'tha', 'THA.LOC104824754' => 'tha', 'THA.LOC104827717' => 'tha', 'Thecc.02G031400' => 'tca', 'Thecc.02G055900' => 'tca', 'Thecc.02G350800' => 'tca', 'Thecc.06G150900' => 'tca', 'Thecc.06G186600' => 'tca', 'Thecc.07G089600' => 'tca', 'Thecc.08G020400' => 'tca', 'Thecc.08G182100' => 'tca', 'Thhalv10000873m.g' => 'esa', 'Thhalv10004185m.g' => 'esa', 'Thhalv10006981m.g' => 'esa', 'Thhalv10007204m.g' => 'esa', 'Thhalv10011374m.g' => 'esa', 'Thhalv10013482m.g' => 'esa', 'Thhalv10017801m.g' => 'esa', 'Thhalv10024983m.g' => 'esa', 'TPR.G12072' => 'tpr', 'TPR.G15769' => 'tpr', 'TPR.G16504' => 'tpr', 'TPR.G16506' => 'tpr', 'TPR.G24345' => 'tpr', 'TPR.G26666' => 'tpr', 'TPR.G27320' => 'tpr', 'TPR.G31819' => 'tpr', 'TPR.G38879' => 'tpr', 'TPR.G39015' => 'tpr', 'TPR.G8819' => 'tpr', 'TWI09G0924' => 'twi', 'TWI12G0811' => 'twi', 'TWI12G1294' => 'twi', 'TWI31G0150' => 'twi', 'TWI36G1262' => 'twi', 'TWI38G1287' => 'twi', 'TWI38G1633' => 'twi', 'TWI38G1982' => 'twi', 'TWI39G0116' => 'twi', 'TWI60G1011' => 'twi', 'TWI63G0171' => 'twi', 'TWI73G0839' => 'twi', 'TWI79G1511' => 'twi', 'unitig_0.g915' => 'ugi', 'unitig_0.g916' => 'ugi', 'unitig_21.g20219' => 'ugi', 'unitig_21.g20416' => 'ugi', 'unitig_578.g16132' => 'ugi', 'unitig_578.g16718' => 'ugi', 'unitig_62.g23481' => 'ugi', 'unitig_744.g24535' => 'ugi', 'unitig_749.g13525' => 'ugi', 'vmacro01248' => 'vma', 'vmacro02290' => 'vma', 'vmacro10946' => 'vma', 'vmacro11865' => 'vma', 'vmacro12493' => 'vma', 'vmacro17322' => 'vma', 'vmacro21599' => 'vma', 'vmacro23041' => 'vma', 'VMungo0251G0004' => 'vmu', 'VMungo0251G2639' => 'vmu', 'VMungo0251G2967' => 'vmu', 'VMungo0540G0864' => 'vmu', 'VMungo0540G1569' => 'vmu', 'VMungo0647G0317' => 'vmu', 'VMungo0720G1373' => 'vmu', 'VMungo0720G1508' => 'vmu', 'VMungo1080G0485' => 'vmu', 'VMungo1215G3177' => 'vmu', 'Zm00001eb112600' => 'zma', 'Zm00001eb120220' => 'zma', 'Zm00001eb153240' => 'zma', 'Zm00001eb168880' => 'zma', 'Zm00001eb213920' => 'zma', 'Zm00001eb228280' => 'zma', 'Zm00001eb254580' => 'zma', 'Zm00001eb272180' => 'zma', 'Zm00001eb293190' => 'zma', 'Zm00001eb322930' => 'zma', 'Zm00001eb353360' => 'zma', 'Zm00001eb353390' => 'zma', 'Zm00001eb353430' => 'zma', 'Zm00001eb353440' => 'zma', 'Zm00001eb353780' => 'zma' ) $gf_id = 'HOM05D000499' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000499' ) $data_identifier = 'HOM05D000499' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 29, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 12, 'amhyb' => (int) 8, 'aly' => (int) 12, 'aox' => (int) 9, 'arhy' => (int) 26, 'ath' => (int) 8, 'atr' => (int) 7, 'acertr' => (int) 10, 'cqu' => (int) 15, 'bca' => (int) 29, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 11, 'cansat' => (int) 8, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 9, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 8, 'cpa' => (int) 10, 'csa' => (int) 7, 'camsi' => (int) 20, 'dca' => (int) 8, 'din' => (int) 12, 'dzi' => (int) 14, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 6, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 38, 'gra' => (int) 16, 'vvi' => (int) 8, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 5, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 11, 'lja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 11, 'mpo' => (int) 3, 'mbi' => (int) 14, 'mdo' => (int) 14, 'mtr' => (int) 8, 'cme' => (int) 9, 'egut' => (int) 9, 'ama' => (int) 11, 'nta' => (int) 17, 'nnu' => (int) 11, 'oeu' => (int) 18, 'osa' => (int) 8, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 6, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 9, 'rsi' => (int) 9, 'sbr' => (int) 10, 'sbo' => (int) 8, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 10, 'sas' => (int) 10, 'shi' => (int) 6, 'smo' => (int) 7, 'sly' => (int) 14, 'spe' => (int) 10, 'spa' => (int) 8, 'tar' => (int) 19, 'tha' => (int) 10, 'tca' => (int) 8, 'esa' => (int) 8, 'tpr' => (int) 11, 'twi' => (int) 13, 'ugi' => (int) 9, 'vma' => (int) 8, 'vmu' => (int) 10, 'zma' => (int) 15 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb353780' $species_info = array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ) $local_species = 'twi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000499', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1066', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p29780' => 'bna', 'A02p33180' => 'bna', 'A03p16470' => 'bna', 'A03p66010' => 'bna', 'A04p25970' => 'bna', 'A06p01270' => 'bna', 'A06p46080' => 'bna', 'A07p11400' => 'bna', 'A08p01840' => 'bna', 'A08p08230' => 'bna', 'A08p25740' => 'bna', 'A09p32070' => 'bna', 'A09p37830' => 'bna', 'A09p42840' => 'bna', 'A09p42850' => 'bna', 'Aa31LG10G2060' => 'aar', 'Aa31LG2G7410' => 'aar', 'Aa31LG6G10200' => 'aar', 'Aa31LG6G16680' => 'aar', 'Aa31LG6G8470' => 'aar', 'Aa31LG9G12730' => 'aar', 'Aa31LG9G13680' => 'aar', 'Aa31LG9G14920' => 'aar', 'Aa31LG9G6650' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4977' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5467' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3254' => 'aag', 'Actinidia02578' => 'ach', 'Actinidia07693' => 'ach', 'Actinidia08413' => 'ach', 'Actinidia08414' => 'ach', 'Actinidia15289' => 'ach', 'Actinidia19871' => 'ach', 'Actinidia21475' => 'ach', 'Actinidia22576' => 'ach', 'Actinidia28327' => 'ach', 'Actinidia32491' => 'ach', 'Actinidia39463' => 'ach', 'Actinidia39571' => 'ach', 'Ah.01g013750' => 'amhyb', 'Ah.01g023210' => 'amhyb', 'Ah.04g164850' => 'amhyb', 'Ah.05g178060' => 'amhyb', 'Ah.07g204270' => 'amhyb', 'Ah.07g208480' => 'amhyb', 'Ah.09g237410' => 'amhyb', 'Ah.14g089460' => 'amhyb', 'AL1G41790' => 'aly', 'AL1G49050' => 'aly', 'AL1G53810' => 'aly', 'AL1G61400' => 'aly', 'AL4G18580' => 'aly', 'AL5G12510' => 'aly', 'AL5G12540' => 'aly', 'AL6G43230' => 'aly', 'AL7G10370' => 'aly', 'AL7G19250' => 'aly', 'AL8G12240' => 'aly', 'AL8G18540' => 'aly', 'Aqoxy1G02409' => 'aox', 'Aqoxy2G03993' => 'aox', 'Aqoxy3G03357' => 'aox', 'Aqoxy4G00785' => 'aox', 'Aqoxy5G02598' => 'aox', 'Aqoxy6G00132' => 'aox', 'Aqoxy7G01776' => 'aox', 'Aqoxy7G02316' => 'aox', 'Aqoxy7G03973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.12AFKW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B8730' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27IQR1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3F75VG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3RE0GA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41TCQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.527VTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FIR39' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5W8UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DA38EV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ63HS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H1I32C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HC27T5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4M8AP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7N3CZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9UVDZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LS1NQA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT1D4B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SKC4TM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCFV76' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF9Q1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQWD9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1ZM88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WE07RT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YCK7VH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJE6Q6' => 'arhy', 'AT1G28240' => 'ath', 'AT1G34550' => 'ath', 'AT1G53040' => 'ath', 'AT2G02910' => 'ath', 'AT4G09630' => 'ath', 'AT4G38500' => 'ath', 'AT5G42660' => 'ath', 'AT5G46220' => 'ath', 'ATR0152G026' => 'atr', 'ATR0564G343' => 'atr', 'ATR0706G151' => 'atr', 'ATR0733G207' => 'atr', 'ATR0751G234' => 'atr', 'ATR0807G048' => 'atr', 'ATR1091G084' => 'atr', 'Atru.chr10.1229' => 'acertr', 'Atru.chr10.1230' => 'acertr', 'Atru.chr10.1874' => 'acertr', 'Atru.chr11.1808' => 'acertr', 'Atru.chr13.1795' => 'acertr', 'Atru.chr13.570' => 'acertr', 'Atru.chr2.2608' => 'acertr', 'Atru.chr2.2609' => 'acertr', 'Atru.chr5.3428' => 'acertr', 'Atru.chr8.1171' => 'acertr', 'AUR62004651' => 'cqu', 'AUR62008675' => 'cqu', 'AUR62010014' => 'cqu', 'AUR62013004' => 'cqu', 'AUR62014825' => 'cqu', 'AUR62015015' => 'cqu', 'AUR62015151' => 'cqu', 'AUR62017020' => 'cqu', 'AUR62019422' => 'cqu', 'AUR62023570' => 'cqu', 'AUR62025571' => 'cqu', 'AUR62029098' => 'cqu', 'AUR62033863' => 'cqu', 'AUR62034296' => 'cqu', 'AUR62040075' => 'cqu', 'BcaB02g07334' => 'bca', 'BcaB02g10575' => 'bca', 'BcaB03g12119' => 'bca', 'BcaB03g12120' => 'bca', 'BcaB03g13945' => 'bca', 'BcaB04g17123' => 'bca', 'BcaB04g17867' => 'bca', 'BcaB04g19839' => 'bca', 'BcaB07g30317' => 'bca', 'BcaB07g32432' => 'bca', 'BcaB07g33362' => 'bca', 'BcaB08g36611' => 'bca', 'BcaC01g00028' => 'bca', 'BcaC01g01356' => 'bca', 'BcaC01g02034' => 'bca', 'BcaC01g06051' => 'bca', 'BcaC03g16839' => 'bca', 'BcaC03g17176' => 'bca', 'BcaC05g26829' => 'bca', 'BcaC06g31490' => 'bca', 'BcaC06g35344' => 'bca', 'BcaC06g36570' => 'bca', 'BcaC07g37537' => 'bca', 'BcaC08g43491' => 'bca', 'BcaC08g43773' => 'bca', 'BcaNung00234' => 'bca', 'BcaNung01982' => 'bca', 'BcaNung03707' => 'bca', 'BcaNung06454' => 'bca', 'BolC2t10762H' => 'bol', 'BolC2t11191H' => 'bol', 'BolC3t14322H' => 'bol', 'BolC3t19747H' => 'bol', 'BolC3t21425H' => 'bol', 'BolC4t27800H' => 'bol', 'BolC5t31423H' => 'bol', 'BolC6t35951H' => 'bol', 'BolC6t36282H' => 'bol', 'BolC7t40678H' => 'bol', 'BolC7t40679H' => 'bol', 'BolC7t42222H' => 'bol', 'BolC7t43492H' => 'bol', 'BolC7t46785H' => 'bol', 'BolC8t47853H' => 'bol', 'BolC9t56805H' => 'bol', 'BraA02t08000Z' => 'bra', 'BraA02t08341Z' => 'bra', 'BraA03t10936Z' => 'bra', 'BraA03t15657Z' => 'bra', 'BraA04t18100Z' => 'bra', 'BraA05t20523Z' => 'bra', 'BraA06t23353Z' => 'bra', 'BraA06t27473Z' => 'bra', 'BraA06t27769Z' => 'bra', 'BraA07t28928Z' => 'bra', 'BraA08t32236Z' => 'bra', 'BraA08t32841Z' => 'bra', 'BraA08t34524Z' => 'bra', 'BraA09t38742Z' => 'bra', 'BraA09t39295Z' => 'bra', 'C02p47180' => 'bna', 'C02p50990' => 'bna', 'C03p19360' => 'bna', 'C03p74950' => 'bna', 'C03p91000' => 'bna', 'C04p63260' => 'bna', 'C05p27050' => 'bna', 'C06p08750' => 'bna', 'C06p11490' => 'bna', 'C07p02820' => 'bna', 'C07p17180' => 'bna', 'C07p29440' => 'bna', 'C07p63730' => 'bna', 'C09p39260' => 'bna', 'CAN.G1164.34' => 'can', 'CAN.G1164.39' => 'can', 'CAN.G1530.3' => 'can', 'CAN.G162.61' => 'can', 'CAN.G176.6' => 'can', 'CAN.G289.49' => 'can', 'CAN.G370.21' => 'can', 'CAN.G370.22' => 'can', 'CAN.G371.117' => 'can', 'CAN.G58.37' => 'can', 'CAN.G588.98' => 'can', 'CANSAT21G2266' => 'cansat', 'CANSAT25G2799' => 'cansat', 'CANSAT35G0862' => 'cansat', 'CANSAT35G1704' => 'cansat', 'CANSAT35G1760' => 'cansat', 'CANSAT56G3971' => 'cansat', 'CANSAT56G4116' => 'cansat', 'CANSAT80G1259' => 'cansat', 'CARHR027730' => 'chi', 'CARHR033880' => 'chi', 'CARHR043270' => 'chi', 'CARHR145330' => 'chi', 'CARHR145340' => 'chi', 'CARHR175570' => 'chi', 'CARHR181570' => 'chi', 'CARHR258470' => 'chi', 'CARHR260490' => 'chi', 'CARHR294220' => 'chi', 'Carub.0001s2668' => 'cru', 'Carub.0001s3257' => 'cru', 'Carub.0001s4220' => 'cru', 'Carub.0005s0179' => 'cru', 'Carub.0006s2807' => 'cru', 'Carub.0007s0039' => 'cru', 'Carub.0008s0169' => 'cru', 'Carub.0008s0636' => 'cru', 'Ca_00338_v3' => 'car', 'Ca_00542_v3' => 'car', 'Ca_01844_v3' => 'car', 'Ca_10611_v3' => 'car', 'Ca_13326_v3' => 'car', 'Ca_17944_v3' => 'car', 'Ca_18546_v3' => 'car', 'Ca_24219_v3' => 'car', 'Ca_29972_v3' => 'car', 'CBR_g3681' => 'cbr', 'CBR_g40021' => 'cbr', 'Cc01_g08140' => 'ccan', 'Cc02_g13410' => 'ccan', 'Cc02_g37480' => 'ccan', 'Cc05_g12030' => 'ccan', 'Cc09_g03370' => 'ccan', 'Cc09_g10300' => 'ccan', 'Cc10_g03530' => 'ccan', 'Cc10_g11380' => 'ccan', 'CDE01G0176' => 'cde', 'CDE02G0675' => 'cde', 'CDE02G0942' => 'cde', 'CDE02G1153' => 'cde', 'CDE02G4177' => 'cde', 'CDE04G2117' => 'cde', 'CDE04G2736' => 'cde', 'CDE08G1161' => 'cde', 'CDE09G1238' => 'cde', 'Cfa000467' => 'cfa', 'Cfa000947' => 'cfa', 'Cfa004969' => 'cfa', 'Cfa005284' => 'cfa', 'Cfa008993' => 'cfa', 'Cfa018187' => 'cfa', 'Cfa018454' => 'cfa', 'Cfa020585' => 'cfa', 'Ciclev10000424m.g' => 'ccl', 'Ciclev10003605m.g' => 'ccl', 'Ciclev10007828m.g' => 'ccl', 'Ciclev10014620m.g' => 'ccl', 'Ciclev10015169m.g' => 'ccl', 'Ciclev10018291m.g' => 'ccl', 'Ciclev10028256m.g' => 'ccl', 'Ciclev10033822m.g' => 'ccl', 'CiPaw.05G060300' => 'cil', 'CiPaw.05G085000' => 'cil', 'CiPaw.06G083700' => 'cil', 'CiPaw.06G120300' => 'cil', 'CiPaw.09G060500' => 'cil', 'CiPaw.09G123800' => 'cil', 'CiPaw.11G169700' => 'cil', 'CiPaw.12G118300' => 'cil', 'CiPaw.15G071000' => 'cil', 'CiPaw.15G081900' => 'cil', 'ClCG01G024610' => 'cla', 'ClCG03G006070' => 'cla', 'ClCG05G019250' => 'cla', 'ClCG09G009500' => 'cla', 'ClCG11G008200' => 'cla', 'ClCG11G018080' => 'cla', 'COL.COLO4_17373' => 'col', 'COL.COLO4_22994' => 'col', 'COL.COLO4_26389' => 'col', 'COL.COLO4_27170' => 'col', 'COL.COLO4_31074' => 'col', 'COL.COLO4_31465' => 'col', 'COL.COLO4_36438' => 'col', 'COL.COLO4_36439' => 'col', 'Cpa.g.c38781' => 'cpa', 'Cpa.g.sc128.12' => 'cpa', 'Cpa.g.sc166.7' => 'cpa', 'Cpa.g.sc166.8' => 'cpa', 'Cpa.g.sc20.111' => 'cpa', 'Cpa.g.sc27.31' => 'cpa', 'Cpa.g.sc64.36' => 'cpa', 'Cpa.g.sc64.37' => 'cpa', 'Cpa.g.sc66.49' => 'cpa', 'Cpa.g.sc80.64' => 'cpa', 'CsaV3_1G012320' => 'csa', 'CsaV3_2G008480' => 'csa', 'CsaV3_2G033450' => 'csa', 'CsaV3_3G044830' => 'csa', 'CsaV3_4G033710' => 'csa', 'CsaV3_6G051730' => 'csa', 'CsaV3_7G025350' => 'csa', 'CSS0001067' => 'camsi', 'CSS0005996' => 'camsi', 'CSS0006590' => 'camsi', 'CSS0009673' => 'camsi', 'CSS0010201' => 'camsi', 'CSS0010549' => 'camsi', 'CSS0011364' => 'camsi', 'CSS0014473' => 'camsi', 'CSS0014961' => 'camsi', 'CSS0020191' => 'camsi', 'CSS0021165' => 'camsi', 'CSS0022306' => 'camsi', 'CSS0030591' => 'camsi', 'CSS0030696' => 'camsi', 'CSS0032653' => 'camsi', 'CSS0037487' => 'camsi', 'CSS0041102' => 'camsi', 'CSS0041261' => 'camsi', 'CSS0046246' => 'camsi', 'CSS0049256' => 'camsi', 'DCAR_004075' => 'dca', 'DCAR_011538' => 'dca', 'DCAR_019553' => 'dca', 'DCAR_020952' => 'dca', 'DCAR_021739' => 'dca', 'DCAR_027407' => 'dca', 'DCAR_027913' => 'dca', 'DCAR_028066' => 'dca', 'Dinv05899' => 'din', 'Dinv07563' => 'din', 'Dinv08010' => 'din', 'Dinv14125' => 'din', 'Dinv20172' => 'din', 'Dinv30743' => 'din', 'Dinv31229' => 'din', 'Dinv34162' => 'din', 'Dinv36028' => 'din', 'Dinv39368' => 'din', 'Dinv40565' => 'din', 'Dinv41706' => 'din', 'Duzib052G0089' => 'dzi', 'Duzib116G0641' => 'dzi', 'Duzib132G0069' => 'dzi', 'Duzib132G1219' => 'dzi', 'Duzib147G0278' => 'dzi', 'Duzib160G0480' => 'dzi', 'Duzib170G0661' => 'dzi', 'Duzib177G0591' => 'dzi', 'Duzib187G1353' => 'dzi', 'Duzib192G0858' => 'dzi', 'Duzib192G0883' => 'dzi', 'Duzib213G0506' => 'dzi', 'Duzib235G0289' => 'dzi', 'Duzib251G0422' => 'dzi', 'ECA232G3898' => 'eca', 'ECA233G5950' => 'eca', 'ECA234G1699' => 'eca', 'ECA234G2421' => 'eca', 'ECA236G0426' => 'eca', 'ECA236G4331' => 'eca', 'ECA248G2573' => 'eca', 'EL10Ac1g00077' => 'bvu', 'EL10Ac1g01746' => 'bvu', 'EL10Ac2g03464' => 'bvu', 'EL10Ac4g08176' => 'bvu', 'EL10Ac7g17521' => 'bvu', 'EL10Ac8g20386' => 'bvu', 'EL10Ac9g21343' => 'bvu', 'EL10Ac9g22688' => 'bvu', 'Eucgr.B03434' => 'egr', 'Eucgr.D00618' => 'egr', 'Eucgr.E02395' => 'egr', 'Eucgr.F01129' => 'egr', 'Eucgr.F02622' => 'egr', 'Eucgr.F04207' => 'egr', 'FAN01G0570' => 'fan', 'FAN03G3351' => 'fan', 'FAN06G3702' => 'fan', 'FAN07G2149' => 'fan', 'FAN10G3758' => 'fan', 'FAN11G1170' => 'fan', 'FAN11G2050' => 'fan', 'FAN11G2724' => 'fan', 'FAN12G1700' => 'fan', 'FAN12G2028' => 'fan', 'FAN15G1160' => 'fan', 'FAN15G3063' => 'fan', 'FAN16G2540' => 'fan', 'FAN16G3077' => 'fan', 'FAN16G3624' => 'fan', 'FAN17G0221' => 'fan', 'FAN20G2492' => 'fan', 'FAN20G2905' => 'fan', 'FAN21G0548' => 'fan', 'FAN21G1300' => 'fan', 'FAN22G0077' => 'fan', 'FAN22G1315' => 'fan', 'FAN24G1280' => 'fan', 'FAN24G1445' => 'fan', 'FAN24G3527' => 'fan', 'FAN25G0464' => 'fan', 'FAN25G2885' => 'fan', 'FAN25G3270' => 'fan', 'FAN27G1101' => 'fan', 'FAN27G2846' => 'fan', 'FAN27G3524' => 'fan', 'FvH4_2g11770' => 'fve', 'FvH4_2g15630' => 'fve', 'FvH4_3g05570' => 'fve', 'FvH4_3g09110' => 'fve', 'FvH4_3g19940' => 'fve', 'FvH4_4g04821' => 'fve', 'FvH4_4g31480' => 'fve', 'FvH4_7g01740' => 'fve', 'Glyma.05G130400' => 'gma', 'Glyma.05G156400' => 'gma', 'Glyma.07G197000' => 'gma', 'Glyma.08G085151' => 'gma', 'Glyma.08G114500' => 'gma', 'Glyma.08G300400' => 'gma', 'Glyma.10G215800' => 'gma', 'Glyma.12G224400' => 'gma', 'Glyma.13G179300' => 'gma', 'Glyma.13G218151' => 'gma', 'Glyma.13G238800' => 'gma', 'Glyma.13G276900' => 'gma', 'Glyma.14G078200' => 'gma', 'Glyma.15G074500' => 'gma', 'Glyma.15G094100' => 'gma', 'Glyma.17G247200' => 'gma', 'Glyma.18G120100' => 'gma', 'Glyma.20G176000' => 'gma', 'Gohir.A01G063600' => 'ghi', 'Gohir.A01G170301' => 'ghi', 'Gohir.A02G060500' => 'ghi', 'Gohir.A05G133850' => 'ghi', 'Gohir.A05G161400' => 'ghi', 'Gohir.A06G012900' => 'ghi', 'Gohir.A06G035901' => 'ghi', 'Gohir.A06G127100' => 'ghi', 'Gohir.A06G210500' => 'ghi', 'Gohir.A08G008650' => 'ghi', 'Gohir.A09G072700' => 'ghi', 'Gohir.A09G088301' => 'ghi', 'Gohir.A10G040600' => 'ghi', 'Gohir.A12G036300' => 'ghi', 'Gohir.A12G143350' => 'ghi', 'Gohir.A12G165500' => 'ghi', 'Gohir.A13G145700' => 'ghi', 'Gohir.D01G050000' => 'ghi', 'Gohir.D01G051366' => 'ghi', 'Gohir.D01G161350' => 'ghi', 'Gohir.D02G065900' => 'ghi', 'Gohir.D05G164200' => 'ghi', 'Gohir.D05G355500' => 'ghi', 'Gohir.D06G010400' => 'ghi', 'Gohir.D06G111250' => 'ghi', 'Gohir.D06G132000' => 'ghi', 'Gohir.D06G210500' => 'ghi', 'Gohir.D07G165675' => 'ghi', 'Gohir.D08G062240' => 'ghi', 'Gohir.D08G086101' => 'ghi', 'Gohir.D08G138060' => 'ghi', 'Gohir.D09G072300' => 'ghi', 'Gohir.D10G041400' => 'ghi', 'Gohir.D11G191020' => 'ghi', 'Gohir.D11G212066' => 'ghi', 'Gohir.D12G036300' => 'ghi', 'Gohir.D12G168600' => 'ghi', 'Gohir.D13G150600' => 'ghi', 'Gorai.001G057300' => 'gra', 'Gorai.002G069900' => 'gra', 'Gorai.002G200000' => 'gra', 'Gorai.003G067600' => 'gra', 'Gorai.005G074800' => 'gra', 'Gorai.006G087300' => 'gra', 'Gorai.008G037500' => 'gra', 'Gorai.008G181400' => 'gra', 'Gorai.009G169400' => 'gra', 'Gorai.009G387900' => 'gra', 'Gorai.010G013300' => 'gra', 'Gorai.010G153800' => 'gra', 'Gorai.010G255800' => 'gra', 'Gorai.011G043700' => 'gra', 'Gorai.011G198900' => 'gra', 'Gorai.013G168400' => 'gra', 'GSVIVG01005212001' => 'vvi', 'GSVIVG01006163001' => 'vvi', 'GSVIVG01009625001' => 'vvi', 'GSVIVG01014338001' => 'vvi', 'GSVIVG01020005001' => 'vvi', 'GSVIVG01021450001' => 'vvi', 'GSVIVG01023975001' => 'vvi', 'GSVIVG01034490001' => 'vvi', 'HanXRQChr04g0112071' => 'han', 'HanXRQChr05g0131151' => 'han', 'HanXRQChr09g0262371' => 'han', 'HanXRQChr09g0268401' => 'han', 'HanXRQChr10g0279241' => 'han', 'HanXRQChr10g0297961' => 'han', 'HanXRQChr11g0326231' => 'han', 'HanXRQChr11g0328471' => 'han', 'HanXRQChr16g0507941' => 'han', 'HanXRQChr17g0560211' => 'han', 'Haze_02108' => 'cav', 'Haze_02428' => 'cav', 'Haze_05593' => 'cav', 'Haze_06448' => 'cav', 'Haze_09427' => 'cav', 'Haze_12022' => 'cav', 'Haze_17612' => 'cav', 'Haze_17928' => 'cav', 'Hma1.2p1_0032F.1_g019250' => 'hma', 'Hma1.2p1_0163F.1_g072690' => 'hma', 'Hma1.2p1_0265F.1_g106710' => 'hma', 'Hma1.2p1_0286F.1_g113970' => 'hma', 'Hma1.2p1_0363F.1_g136640' => 'hma', 'Hma1.2p1_0584F.1_g183470' => 'hma', 'Hma1.2p1_0885F.1_g232570' => 'hma', 'HPP92_006022' => 'vpl', 'HPP92_007320' => 'vpl', 'HPP92_011521' => 'vpl', 'HPP92_019387' => 'vpl', 'HPP92_024038' => 'vpl', 'Hund05891' => 'sun', 'Hund06450' => 'sun', 'Hund12053' => 'sun', 'Hund16800' => 'sun', 'Hund21222' => 'sun', 'Hund22896' => 'sun', 'Hund23746' => 'sun', 'Hund27083' => 'sun', 'Lalb_Chr02g0141831' => 'lal', 'Lalb_Chr02g0141841' => 'lal', 'Lalb_Chr05g0220411' => 'lal', 'Lalb_Chr06g0162081' => 'lal', 'Lalb_Chr09g0327651' => 'lal', 'Lalb_Chr13g0295051' => 'lal', 'Lalb_Chr15g0086801' => 'lal', 'Lalb_Chr16g0383781' => 'lal', 'Lalb_Chr16g0383791' => 'lal', 'Lalb_Chr18g0055441' => 'lal', 'Lalb_Chr18g0059611' => 'lal', 'Lalb_Chr20g0109661' => 'lal', 'Lalb_Chr20g0109831' => 'lal', 'Lalb_Chr20g0121871' => 'lal', 'Lalb_Chr22g0355361' => 'lal', 'Lalb_Chr25g0286371' => 'lal', 'Lj1A1187G43' => 'lonja', 'Lj1A1205T50' => 'lonja', 'Lj1A800G33' => 'lonja', 'Lj1C1187T7' => 'lonja', 'Lj1C843T11' => 'lonja', 'Lj1g0010940' => 'lja', 'Lj2A288T69' => 'lonja', 'Lj3g0024276' => 'lja', 'Lj4A47T76' => 'lonja', 'Lj4g0005805' => 'lja', 'Lj4g0006097' => 'lja', 'Lj4g0008528' => 'lja', 'Lj4g0024907' => 'lja', 'Lj5g0012472' => 'lja', 'Lj5g0018648' => 'lja', 'Lj6C789G1' => 'lonja', 'Lj6g0004000' => 'lja', 'Lj7A292G67' => 'lonja', 'Lj7A292T64' => 'lonja', 'Lj9A400T58' => 'lonja', 'Lsat_1_v5_gn_1_126181' => 'lsa', 'Lsat_1_v5_gn_4_123041' => 'lsa', 'Lsat_1_v5_gn_4_133620' => 'lsa', 'Lsat_1_v5_gn_4_53221' => 'lsa', 'Lsat_1_v5_gn_4_71961' => 'lsa', 'Lsat_1_v5_gn_7_105241' => 'lsa', 'Lsat_1_v5_gn_7_21361' => 'lsa', 'Lsat_1_v5_gn_7_28860' => 'lsa', 'Lsat_1_v5_gn_7_31260' => 'lsa', 'Lsat_1_v5_gn_8_52801' => 'lsa', 'Manes.02G191400' => 'mes', 'Manes.03G110100' => 'mes', 'Manes.04G071100' => 'mes', 'Manes.05G100500' => 'mes', 'Manes.05G164700' => 'mes', 'Manes.15G087000' => 'mes', 'Manes.15G121500' => 'mes', 'Manes.16G028300' => 'mes', 'Manes.17G046100' => 'mes', 'Manes.17G069800' => 'mes', 'Manes.18G100500' => 'mes', 'Mapoly0002s0109' => 'mpo', 'Mapoly0024s0007' => 'mpo', 'Mapoly0089s0032' => 'mpo', 'MBI04_g42241_MAGBIO' => 'mbi', 'MBI05_g11988_MAGBIO' => 'mbi', 'MBI05_g35452_MAGBIO' => 'mbi', 'MBI07_g30179_MAGBIO' => 'mbi', 'MBI07_g35859_MAGBIO' => 'mbi', 'MBI07_g35860_MAGBIO' => 'mbi', 'MBI07_g37166_MAGBIO' => 'mbi', 'MBI08_g18172_MAGBIO' => 'mbi', 'MBI09_g08441_MAGBIO' => 'mbi', 'MBI13_g01676_MAGBIO' => 'mbi', 'MBI14_g42955_MAGBIO' => 'mbi', 'MBI16_g13161_MAGBIO' => 'mbi', 'MBI17_g27204_MAGBIO' => 'mbi', 'MBI19_g21595_MAGBIO' => 'mbi', 'MD00G1148400' => 'mdo', 'MD02G1301200' => 'mdo', 'MD03G1227800' => 'mdo', 'MD05G1041100' => 'mdo', 'MD05G1124800' => 'mdo', 'MD05G1284000' => 'mdo', 'MD05G1338800' => 'mdo', 'MD05G1338900' => 'mdo', 'MD07G1022800' => 'mdo', 'MD10G1047500' => 'mdo', 'MD10G1127500' => 'mdo', 'MD10G1262300' => 'mdo', 'MD10G1293800' => 'mdo', 'MD16G1074300' => 'mdo', 'Medtr1g021670' => 'mtr', 'Medtr1g096320' => 'mtr', 'Medtr2g013690' => 'mtr', 'Medtr2g019450' => 'mtr', 'Medtr2g085170' => 'mtr', 'Medtr4g088785' => 'mtr', 'Medtr8g055930' => 'mtr', 'Medtr8g085850' => 'mtr', 'MELO3C002605.2' => 'cme', 'MELO3C003891.2' => 'cme', 'MELO3C004012.2' => 'cme', 'MELO3C007134.2' => 'cme', 'MELO3C008118.2' => 'cme', 'MELO3C016700.2' => 'cme', 'MELO3C024127.2' => 'cme', 'MELO3C033361.2' => 'cme', 'MELO3C033362.2' => 'cme', 'Migut.C00430' => 'egut', 'Migut.C01246' => 'egut', 'Migut.E00101' => 'egut', 'Migut.H01486' => 'egut', 'Migut.H01939' => 'egut', 'Migut.K00360' => 'egut', 'Migut.M00910' => 'egut', 'Migut.M01139' => 'egut', 'Migut.N02677' => 'egut', 'MSTRG.13252' => 'ama', 'MSTRG.14701' => 'ama', 'MSTRG.1521' => 'ama', 'MSTRG.15884' => 'ama', 'MSTRG.16242' => 'ama', 'MSTRG.22285' => 'ama', 'MSTRG.22444' => 'ama', 'MSTRG.2349' => 'ama', 'MSTRG.26308' => 'ama', 'MSTRG.28296' => 'ama', 'MSTRG.9895' => 'ama', 'Nitab4.5_0000110g0060' => 'nta', 'Nitab4.5_0000420g0130' => 'nta', 'Nitab4.5_0000422g0030' => 'nta', 'Nitab4.5_0000560g0180' => 'nta', 'Nitab4.5_0000703g0100' => 'nta', 'Nitab4.5_0000786g0200' => 'nta', 'Nitab4.5_0001336g0020' => 'nta', 'Nitab4.5_0001796g0030' => 'nta', 'Nitab4.5_0003348g0060' => 'nta', 'Nitab4.5_0003698g0040' => 'nta', 'Nitab4.5_0003942g0090' => 'nta', 'Nitab4.5_0004775g0070' => 'nta', 'Nitab4.5_0004864g0030' => 'nta', 'Nitab4.5_0005615g0020' => 'nta', 'Nitab4.5_0009288g0030' => 'nta', 'Nitab4.5_0009341g0010' => 'nta', 'Nitab4.5_0009535g0010' => 'nta', 'Nn1g03995' => 'nnu', 'Nn1g04100' => 'nnu', 'Nn1g06530' => 'nnu', 'Nn3g16404' => 'nnu', 'Nn3g17212' => 'nnu', 'Nn3g20776' => 'nnu', 'Nn3g21923' => 'nnu', 'Nn5g27737' => 'nnu', 'Nn5g29461' => 'nnu', 'Nn7g38355' => 'nnu', 'Nn8g39873' => 'nnu', 'Oeu000548.2' => 'oeu', 'Oeu004672.1' => 'oeu', 'Oeu015605.2' => 'oeu', 'Oeu016092.1' => 'oeu', 'Oeu017879.3' => 'oeu', 'Oeu024910.1' => 'oeu', 'Oeu028965.1' => 'oeu', 'Oeu031269.1' => 'oeu', 'Oeu031270.1' => 'oeu', 'Oeu032535.1' => 'oeu', 'Oeu034151.1' => 'oeu', 'Oeu034152.1' => 'oeu', 'Oeu034588.2' => 'oeu', 'Oeu050846.1' => 'oeu', 'Oeu050849.2' => 'oeu', 'Oeu051063.2' => 'oeu', 'Oeu052368.1' => 'oeu', 'Oeu052370.1' => 'oeu', 'Os01g0210400' => 'osa', 'Os01g0304300' => 'osa', 'Os01g0749100' => 'osa', 'Os02g0745800' => 'osa', 'Os03g0769050' => 'osa', 'Os05g0531500' => 'osa', 'Os06g0724300' => 'osa', 'Os11g0198100' => 'osa', 'Peaxi162Scf00069g01425' => 'pax', 'Peaxi162Scf00280g00811' => 'pax', 'Peaxi162Scf00310g00615' => 'pax', 'Peaxi162Scf00362g00542' => 'pax', 'Peaxi162Scf00461g00310' => 'pax', 'Peaxi162Scf00530g00118' => 'pax', 'Peaxi162Scf00541g00057' => 'pax', 'Peaxi162Scf00661g00017' => 'pax', 'Peaxi162Scf00926g00027' => 'pax', 'Peaxi162Scf01064g00263' => 'pax', 'Peaxi162Scf01211g00135' => 'pax', 'PGR004G2336' => 'pgr', 'PGR042G0327' => 'pgr', 'PGR042G1957' => 'pgr', 'PGR042G2003' => 'pgr', 'PGR042G3929' => 'pgr', 'PGR083G1137' => 'pgr', 'PGR083G1364' => 'pgr', 'PGSC0003DMG400003381' => 'stu', 'PGSC0003DMG400003417' => 'stu', 'PGSC0003DMG400008981' => 'stu', 'PGSC0003DMG400012417' => 'stu', 'PGSC0003DMG400012823' => 'stu', 'PGSC0003DMG400016885' => 'stu', 'PGSC0003DMG400022812' => 'stu', 'PGSC0003DMG400029726' => 'stu', 'PGSC0003DMG401009243' => 'stu', 'PGSC0003DMG401031505' => 'stu', 'PGSC0003DMG402031505' => 'stu', 'Phvul.001G017600' => 'pvu', 'Phvul.002G193500' => 'pvu', 'Phvul.002G228900' => 'pvu', 'Phvul.002G236800' => 'pvu', 'Phvul.003G049500' => 'pvu', 'Phvul.005G072000' => 'pvu', 'Phvul.006G164800' => 'pvu', 'Phvul.006G185100' => 'pvu', 'Phvul.007G090000' => 'pvu', 'Potri.001G399800' => 'ptr', 'Potri.002G149900' => 'ptr', 'Potri.004G044100' => 'ptr', 'Potri.004G177600' => 'ptr', 'Potri.009G138000' => 'ptr', 'Potri.010G094000' => 'ptr', 'Potri.011G053000' => 'ptr', 'Potri.011G119300' => 'ptr', 'Potri.013G113700' => 'ptr', 'Potri.018G107800' => 'ptr', 'Potri.019G084100' => 'ptr', 'Pp3c14_23720' => 'ppa', 'Pp3c16_6340' => 'ppa', 'Pp3c23_13420' => 'ppa', 'Pp3c24_2740' => 'ppa', 'Pp3c25_860' => 'ppa', 'Pp3c8_21750' => 'ppa', 'Prupe.1G273000' => 'ppe', 'Prupe.1G273700' => 'ppe', 'Prupe.1G274100' => 'ppe', 'Prupe.2G023300' => 'ppe', 'Prupe.4G048000' => 'ppe', 'Prupe.4G080400' => 'ppe', 'Prupe.4G181200' => 'ppe', 'Prupe.8G056900' => 'ppe', 'Prupe.8G168700' => 'ppe', 'Psat1g189080' => 'psa', 'Psat1g204760' => 'psa', 'Psat4g175560' => 'psa', 'Psat4g177720' => 'psa', 'Psat5g244240' => 'psa', 'Psat6g010720' => 'psa', 'Psat6g187200' => 'psa', 'Psat7g072040' => 'psa', 'PSO017G3501' => 'pso', 'PSO063G2148' => 'pso', 'PSO063G5608' => 'pso', 'PSO210G6392' => 'pso', 'PSO541G2319' => 'pso', 'PSO541G2836' => 'pso', 'PSO541G4012' => 'pso', 'PSO541G6253' => 'pso', 'PSO675G0580' => 'pso', 'PSO675G0856' => 'pso', 'PSO675G5635' => 'pso', 'PSO675G9157' => 'pso', 'PSO832G1660' => 'pso', 'PSO832G1969' => 'pso', 'QL02p007186' => 'qlo', 'QL02p033904' => 'qlo', 'QL03p064391' => 'qlo', 'QL05p040593' => 'qlo', 'QL05p058242' => 'qlo', 'QL08p021825' => 'qlo', 'QL11p004981' => 'qlo', 'RcHm_v2.0_Chr1g0318301' => 'rch', 'RcHm_v2.0_Chr4g0418501' => 'rch', 'RcHm_v2.0_Chr4g0439971' => 'rch', 'RcHm_v2.0_Chr5g0008541' => 'rch', 'RcHm_v2.0_Chr5g0014101' => 'rch', 'RcHm_v2.0_Chr5g0014131' => 'rch', 'RcHm_v2.0_Chr5g0033621' => 'rch', 'RcHm_v2.0_Chr6g0272041' => 'rch', 'RcHm_v2.0_Chr6g0278831' => 'rch', 'Rhsim02G0130400' => 'rsi', 'Rhsim02G0171100' => 'rsi', 'Rhsim05G0053000' => 'rsi', 'Rhsim05G0053100' => 'rsi', 'Rhsim06G0096500' => 'rsi', 'Rhsim06G0096600' => 'rsi', 'Rhsim06G0199100' => 'rsi', 'Rhsim12G0062300' => 'rsi', 'Rhsim12G0062800' => 'rsi', 'Sabra02G0118600' => 'sbr', 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'Solyc03g079860.2' => 'sly', 'Solyc04g079770.3' => 'sly', 'Solyc05g007430.4' => 'sly', 'Solyc07g063150.3' => 'sly', 'Solyc08g016620.3' => 'sly', 'Solyc09g057590.3' => 'sly', 'Solyc09g057600.1' => 'sly', 'Solyc10g009050.3' => 'sly', 'Solyc11g017420.2' => 'sly', 'Sopen01g053810' => 'spe', 'Sopen02g023040' => 'spe', 'Sopen03g002440' => 'spe', 'Sopen04g033350' => 'spe', 'Sopen05g003310' => 'spe', 'Sopen07g004050' => 'spe', 'Sopen07g031340' => 'spe', 'Sopen08g006990' => 'spe', 'Sopen10g004830' => 'spe', 'Sopen11g009370' => 'spe', 'Sp1g24450' => 'spa', 'Sp1g29670' => 'spa', 'Sp1g39600' => 'spa', 'Sp2g11080' => 'spa', 'Sp2g13970' => 'spa', 'Sp4g16130' => 'spa', 'Sp6g13080' => 'spa', 'Sp7g37270' => 'spa', 'TAR371G0065' => 'tar', 'TAR376G0340' => 'tar', 'TAR376G0435' => 'tar', 'TAR381G0002' => 'tar', 'TAR381G1236' => 'tar', 'TAR624G0055' => 'tar', 'TAR624G0324' => 'tar', 'TAR624G0696' => 'tar', 'TAR624G0906' => 'tar', 'TAR625G0107' => 'tar', 'TAR626G0015' => 'tar', 'TAR626G1356' => 'tar', 'TAR627G0888' => 'tar', 'TAR628G0399' => 'tar', 'TAR628G1327' => 'tar', 'TAR629G2831' => 'tar', 'TAR629G2874' => 'tar', 'TAR633G1432' => 'tar', 'TAR633G2771' => 'tar', 'THA.LOC104803394' => 'tha', 'THA.LOC104805153' => 'tha', 'THA.LOC104806784' => 'tha', 'THA.LOC104810473' => 'tha', 'THA.LOC104813100' => 'tha', 'THA.LOC104814215' => 'tha', 'THA.LOC104815554' => 'tha', 'THA.LOC104820544' => 'tha', 'THA.LOC104824754' => 'tha', 'THA.LOC104827717' => 'tha', 'Thecc.02G031400' => 'tca', 'Thecc.02G055900' => 'tca', 'Thecc.02G350800' => 'tca', 'Thecc.06G150900' => 'tca', 'Thecc.06G186600' => 'tca', 'Thecc.07G089600' => 'tca', 'Thecc.08G020400' => 'tca', 'Thecc.08G182100' => 'tca', 'Thhalv10000873m.g' => 'esa', 'Thhalv10004185m.g' => 'esa', 'Thhalv10006981m.g' => 'esa', 'Thhalv10007204m.g' => 'esa', 'Thhalv10011374m.g' => 'esa', 'Thhalv10013482m.g' => 'esa', 'Thhalv10017801m.g' => 'esa', 'Thhalv10024983m.g' => 'esa', 'TPR.G12072' => 'tpr', 'TPR.G15769' => 'tpr', 'TPR.G16504' => 'tpr', 'TPR.G16506' => 'tpr', 'TPR.G24345' => 'tpr', 'TPR.G26666' => 'tpr', 'TPR.G27320' => 'tpr', 'TPR.G31819' => 'tpr', 'TPR.G38879' => 'tpr', 'TPR.G39015' => 'tpr', 'TPR.G8819' => 'tpr', 'TWI09G0924' => 'twi', 'TWI12G0811' => 'twi', 'TWI12G1294' => 'twi', 'TWI31G0150' => 'twi', 'TWI36G1262' => 'twi', 'TWI38G1287' => 'twi', 'TWI38G1633' => 'twi', 'TWI38G1982' => 'twi', 'TWI39G0116' => 'twi', 'TWI60G1011' => 'twi', 'TWI63G0171' => 'twi', 'TWI73G0839' => 'twi', 'TWI79G1511' => 'twi', 'unitig_0.g915' => 'ugi', 'unitig_0.g916' => 'ugi', 'unitig_21.g20219' => 'ugi', 'unitig_21.g20416' => 'ugi', 'unitig_578.g16132' => 'ugi', 'unitig_578.g16718' => 'ugi', 'unitig_62.g23481' => 'ugi', 'unitig_744.g24535' => 'ugi', 'unitig_749.g13525' => 'ugi', 'vmacro01248' => 'vma', 'vmacro02290' => 'vma', 'vmacro10946' => 'vma', 'vmacro11865' => 'vma', 'vmacro12493' => 'vma', 'vmacro17322' => 'vma', 'vmacro21599' => 'vma', 'vmacro23041' => 'vma', 'VMungo0251G0004' => 'vmu', 'VMungo0251G2639' => 'vmu', 'VMungo0251G2967' => 'vmu', 'VMungo0540G0864' => 'vmu', 'VMungo0540G1569' => 'vmu', 'VMungo0647G0317' => 'vmu', 'VMungo0720G1373' => 'vmu', 'VMungo0720G1508' => 'vmu', 'VMungo1080G0485' => 'vmu', 'VMungo1215G3177' => 'vmu', 'Zm00001eb112600' => 'zma', 'Zm00001eb120220' => 'zma', 'Zm00001eb153240' => 'zma', 'Zm00001eb168880' => 'zma', 'Zm00001eb213920' => 'zma', 'Zm00001eb228280' => 'zma', 'Zm00001eb254580' => 'zma', 'Zm00001eb272180' => 'zma', 'Zm00001eb293190' => 'zma', 'Zm00001eb322930' => 'zma', 'Zm00001eb353360' => 'zma', 'Zm00001eb353390' => 'zma', 'Zm00001eb353430' => 'zma', 'Zm00001eb353440' => 'zma', 'Zm00001eb353780' => 'zma' ), 'gf_id' => 'HOM05D000499', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000499' ), 'data_identifier' => 'HOM05D000499', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000499', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1066', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p29780' => 'bna', 'A02p33180' => 'bna', 'A03p16470' => 'bna', 'A03p66010' => 'bna', 'A04p25970' => 'bna', 'A06p01270' => 'bna', 'A06p46080' => 'bna', 'A07p11400' => 'bna', 'A08p01840' => 'bna', 'A08p08230' => 'bna', 'A08p25740' => 'bna', 'A09p32070' => 'bna', 'A09p37830' => 'bna', 'A09p42840' => 'bna', 'A09p42850' => 'bna', 'Aa31LG10G2060' => 'aar', 'Aa31LG2G7410' => 'aar', 'Aa31LG6G10200' => 'aar', 'Aa31LG6G16680' => 'aar', 'Aa31LG6G8470' => 'aar', 'Aa31LG9G12730' => 'aar', 'Aa31LG9G13680' => 'aar', 'Aa31LG9G14920' => 'aar', 'Aa31LG9G6650' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4977' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5467' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3254' => 'aag', 'Actinidia02578' => 'ach', 'Actinidia07693' => 'ach', 'Actinidia08413' => 'ach', 'Actinidia08414' => 'ach', 'Actinidia15289' => 'ach', 'Actinidia19871' => 'ach', 'Actinidia21475' => 'ach', 'Actinidia22576' => 'ach', 'Actinidia28327' => 'ach', 'Actinidia32491' => 'ach', 'Actinidia39463' => 'ach', 'Actinidia39571' => 'ach', 'Ah.01g013750' => 'amhyb', 'Ah.01g023210' => 'amhyb', 'Ah.04g164850' => 'amhyb', 'Ah.05g178060' => 'amhyb', 'Ah.07g204270' => 'amhyb', 'Ah.07g208480' => 'amhyb', 'Ah.09g237410' => 'amhyb', 'Ah.14g089460' => 'amhyb', 'AL1G41790' => 'aly', 'AL1G49050' => 'aly', 'AL1G53810' => 'aly', 'AL1G61400' => 'aly', 'AL4G18580' => 'aly', 'AL5G12510' => 'aly', 'AL5G12540' => 'aly', 'AL6G43230' => 'aly', 'AL7G10370' => 'aly', 'AL7G19250' => 'aly', 'AL8G12240' => 'aly', 'AL8G18540' => 'aly', 'Aqoxy1G02409' => 'aox', 'Aqoxy2G03993' => 'aox', 'Aqoxy3G03357' => 'aox', 'Aqoxy4G00785' => 'aox', 'Aqoxy5G02598' => 'aox', 'Aqoxy6G00132' => 'aox', 'Aqoxy7G01776' => 'aox', 'Aqoxy7G02316' => 'aox', 'Aqoxy7G03973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.12AFKW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B8730' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27IQR1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3F75VG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3RE0GA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41TCQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.527VTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FIR39' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5W8UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DA38EV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ63HS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H1I32C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HC27T5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4M8AP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7N3CZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9UVDZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LS1NQA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT1D4B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SKC4TM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCFV76' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF9Q1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQWD9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1ZM88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WE07RT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YCK7VH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJE6Q6' => 'arhy', 'AT1G28240' => 'ath', 'AT1G34550' => 'ath', 'AT1G53040' => 'ath', 'AT2G02910' => 'ath', 'AT4G09630' => 'ath', 'AT4G38500' => 'ath', 'AT5G42660' => 'ath', 'AT5G46220' => 'ath', 'ATR0152G026' => 'atr', 'ATR0564G343' => 'atr', 'ATR0706G151' => 'atr', 'ATR0733G207' => 'atr', 'ATR0751G234' => 'atr', 'ATR0807G048' => 'atr', 'ATR1091G084' => 'atr', 'Atru.chr10.1229' => 'acertr', 'Atru.chr10.1230' => 'acertr', 'Atru.chr10.1874' => 'acertr', 'Atru.chr11.1808' => 'acertr', 'Atru.chr13.1795' => 'acertr', 'Atru.chr13.570' => 'acertr', 'Atru.chr2.2608' => 'acertr', 'Atru.chr2.2609' => 'acertr', 'Atru.chr5.3428' => 'acertr', 'Atru.chr8.1171' => 'acertr', 'AUR62004651' => 'cqu', 'AUR62008675' => 'cqu', 'AUR62010014' => 'cqu', 'AUR62013004' => 'cqu', 'AUR62014825' => 'cqu', 'AUR62015015' => 'cqu', 'AUR62015151' => 'cqu', 'AUR62017020' => 'cqu', 'AUR62019422' => 'cqu', 'AUR62023570' => 'cqu', 'AUR62025571' => 'cqu', 'AUR62029098' => 'cqu', 'AUR62033863' => 'cqu', 'AUR62034296' => 'cqu', 'AUR62040075' => 'cqu', 'BcaB02g07334' => 'bca', 'BcaB02g10575' => 'bca', 'BcaB03g12119' => 'bca', 'BcaB03g12120' => 'bca', 'BcaB03g13945' => 'bca', 'BcaB04g17123' => 'bca', 'BcaB04g17867' => 'bca', 'BcaB04g19839' => 'bca', 'BcaB07g30317' => 'bca', 'BcaB07g32432' => 'bca', 'BcaB07g33362' => 'bca', 'BcaB08g36611' => 'bca', 'BcaC01g00028' => 'bca', 'BcaC01g01356' => 'bca', 'BcaC01g02034' => 'bca', 'BcaC01g06051' => 'bca', 'BcaC03g16839' => 'bca', 'BcaC03g17176' => 'bca', 'BcaC05g26829' => 'bca', 'BcaC06g31490' => 'bca', 'BcaC06g35344' => 'bca', 'BcaC06g36570' => 'bca', 'BcaC07g37537' => 'bca', 'BcaC08g43491' => 'bca', 'BcaC08g43773' => 'bca', 'BcaNung00234' => 'bca', 'BcaNung01982' => 'bca', 'BcaNung03707' => 'bca', 'BcaNung06454' => 'bca', 'BolC2t10762H' => 'bol', 'BolC2t11191H' => 'bol', 'BolC3t14322H' => 'bol', 'BolC3t19747H' => 'bol', 'BolC3t21425H' => 'bol', 'BolC4t27800H' => 'bol', 'BolC5t31423H' => 'bol', 'BolC6t35951H' => 'bol', 'BolC6t36282H' => 'bol', 'BolC7t40678H' => 'bol', 'BolC7t40679H' => 'bol', 'BolC7t42222H' => 'bol', 'BolC7t43492H' => 'bol', 'BolC7t46785H' => 'bol', 'BolC8t47853H' => 'bol', 'BolC9t56805H' => 'bol', 'BraA02t08000Z' => 'bra', 'BraA02t08341Z' => 'bra', 'BraA03t10936Z' => 'bra', 'BraA03t15657Z' => 'bra', 'BraA04t18100Z' => 'bra', 'BraA05t20523Z' => 'bra', 'BraA06t23353Z' => 'bra', 'BraA06t27473Z' => 'bra', 'BraA06t27769Z' => 'bra', 'BraA07t28928Z' => 'bra', 'BraA08t32236Z' => 'bra', 'BraA08t32841Z' => 'bra', 'BraA08t34524Z' => 'bra', 'BraA09t38742Z' => 'bra', 'BraA09t39295Z' => 'bra', 'C02p47180' => 'bna', 'C02p50990' => 'bna', 'C03p19360' => 'bna', 'C03p74950' => 'bna', 'C03p91000' => 'bna', 'C04p63260' => 'bna', 'C05p27050' => 'bna', 'C06p08750' => 'bna', 'C06p11490' => 'bna', 'C07p02820' => 'bna', 'C07p17180' => 'bna', 'C07p29440' => 'bna', 'C07p63730' => 'bna', 'C09p39260' => 'bna', 'CAN.G1164.34' => 'can', 'CAN.G1164.39' => 'can', 'CAN.G1530.3' => 'can', 'CAN.G162.61' => 'can', 'CAN.G176.6' => 'can', 'CAN.G289.49' => 'can', 'CAN.G370.21' => 'can', 'CAN.G370.22' => 'can', 'CAN.G371.117' => 'can', 'CAN.G58.37' => 'can', 'CAN.G588.98' => 'can', 'CANSAT21G2266' => 'cansat', 'CANSAT25G2799' => 'cansat', 'CANSAT35G0862' => 'cansat', 'CANSAT35G1704' => 'cansat', 'CANSAT35G1760' => 'cansat', 'CANSAT56G3971' => 'cansat', 'CANSAT56G4116' => 'cansat', 'CANSAT80G1259' => 'cansat', 'CARHR027730' => 'chi', 'CARHR033880' => 'chi', 'CARHR043270' => 'chi', 'CARHR145330' => 'chi', 'CARHR145340' => 'chi', 'CARHR175570' => 'chi', 'CARHR181570' => 'chi', 'CARHR258470' => 'chi', 'CARHR260490' => 'chi', 'CARHR294220' => 'chi', 'Carub.0001s2668' => 'cru', 'Carub.0001s3257' => 'cru', 'Carub.0001s4220' => 'cru', 'Carub.0005s0179' => 'cru', 'Carub.0006s2807' => 'cru', 'Carub.0007s0039' => 'cru', 'Carub.0008s0169' => 'cru', 'Carub.0008s0636' => 'cru', 'Ca_00338_v3' => 'car', 'Ca_00542_v3' => 'car', 'Ca_01844_v3' => 'car', 'Ca_10611_v3' => 'car', 'Ca_13326_v3' => 'car', 'Ca_17944_v3' => 'car', 'Ca_18546_v3' => 'car', 'Ca_24219_v3' => 'car', 'Ca_29972_v3' => 'car', 'CBR_g3681' => 'cbr', 'CBR_g40021' => 'cbr', 'Cc01_g08140' => 'ccan', 'Cc02_g13410' => 'ccan', 'Cc02_g37480' => 'ccan', 'Cc05_g12030' => 'ccan', 'Cc09_g03370' => 'ccan', 'Cc09_g10300' => 'ccan', 'Cc10_g03530' => 'ccan', 'Cc10_g11380' => 'ccan', 'CDE01G0176' => 'cde', 'CDE02G0675' => 'cde', 'CDE02G0942' => 'cde', 'CDE02G1153' => 'cde', 'CDE02G4177' => 'cde', 'CDE04G2117' => 'cde', 'CDE04G2736' => 'cde', 'CDE08G1161' => 'cde', 'CDE09G1238' => 'cde', 'Cfa000467' => 'cfa', 'Cfa000947' => 'cfa', 'Cfa004969' => 'cfa', 'Cfa005284' => 'cfa', 'Cfa008993' => 'cfa', 'Cfa018187' => 'cfa', 'Cfa018454' => 'cfa', 'Cfa020585' => 'cfa', 'Ciclev10000424m.g' => 'ccl', 'Ciclev10003605m.g' => 'ccl', 'Ciclev10007828m.g' => 'ccl', 'Ciclev10014620m.g' => 'ccl', 'Ciclev10015169m.g' => 'ccl', 'Ciclev10018291m.g' => 'ccl', 'Ciclev10028256m.g' => 'ccl', 'Ciclev10033822m.g' => 'ccl', 'CiPaw.05G060300' => 'cil', 'CiPaw.05G085000' => 'cil', 'CiPaw.06G083700' => 'cil', 'CiPaw.06G120300' => 'cil', 'CiPaw.09G060500' => 'cil', 'CiPaw.09G123800' => 'cil', 'CiPaw.11G169700' => 'cil', 'CiPaw.12G118300' => 'cil', 'CiPaw.15G071000' => 'cil', 'CiPaw.15G081900' => 'cil', 'ClCG01G024610' => 'cla', 'ClCG03G006070' => 'cla', 'ClCG05G019250' => 'cla', 'ClCG09G009500' => 'cla', 'ClCG11G008200' => 'cla', 'ClCG11G018080' => 'cla', 'COL.COLO4_17373' => 'col', 'COL.COLO4_22994' => 'col', 'COL.COLO4_26389' => 'col', 'COL.COLO4_27170' => 'col', 'COL.COLO4_31074' => 'col', 'COL.COLO4_31465' => 'col', 'COL.COLO4_36438' => 'col', 'COL.COLO4_36439' => 'col', 'Cpa.g.c38781' => 'cpa', 'Cpa.g.sc128.12' => 'cpa', 'Cpa.g.sc166.7' => 'cpa', 'Cpa.g.sc166.8' => 'cpa', 'Cpa.g.sc20.111' => 'cpa', 'Cpa.g.sc27.31' => 'cpa', 'Cpa.g.sc64.36' => 'cpa', 'Cpa.g.sc64.37' => 'cpa', 'Cpa.g.sc66.49' => 'cpa', 'Cpa.g.sc80.64' => 'cpa', 'CsaV3_1G012320' => 'csa', 'CsaV3_2G008480' => 'csa', 'CsaV3_2G033450' => 'csa', 'CsaV3_3G044830' => 'csa', 'CsaV3_4G033710' => 'csa', 'CsaV3_6G051730' => 'csa', 'CsaV3_7G025350' => 'csa', 'CSS0001067' => 'camsi', 'CSS0005996' => 'camsi', 'CSS0006590' => 'camsi', 'CSS0009673' => 'camsi', 'CSS0010201' => 'camsi', 'CSS0010549' => 'camsi', 'CSS0011364' => 'camsi', 'CSS0014473' => 'camsi', 'CSS0014961' => 'camsi', 'CSS0020191' => 'camsi', 'CSS0021165' => 'camsi', 'CSS0022306' => 'camsi', 'CSS0030591' => 'camsi', 'CSS0030696' => 'camsi', 'CSS0032653' => 'camsi', 'CSS0037487' => 'camsi', 'CSS0041102' => 'camsi', 'CSS0041261' => 'camsi', 'CSS0046246' => 'camsi', 'CSS0049256' => 'camsi', 'DCAR_004075' => 'dca', 'DCAR_011538' => 'dca', 'DCAR_019553' => 'dca', 'DCAR_020952' => 'dca', 'DCAR_021739' => 'dca', 'DCAR_027407' => 'dca', 'DCAR_027913' => 'dca', 'DCAR_028066' => 'dca', 'Dinv05899' => 'din', 'Dinv07563' => 'din', 'Dinv08010' => 'din', 'Dinv14125' => 'din', 'Dinv20172' => 'din', 'Dinv30743' => 'din', 'Dinv31229' => 'din', 'Dinv34162' => 'din', 'Dinv36028' => 'din', 'Dinv39368' => 'din', 'Dinv40565' => 'din', 'Dinv41706' => 'din', 'Duzib052G0089' => 'dzi', 'Duzib116G0641' => 'dzi', 'Duzib132G0069' => 'dzi', 'Duzib132G1219' => 'dzi', 'Duzib147G0278' => 'dzi', 'Duzib160G0480' => 'dzi', 'Duzib170G0661' => 'dzi', 'Duzib177G0591' => 'dzi', 'Duzib187G1353' => 'dzi', 'Duzib192G0858' => 'dzi', 'Duzib192G0883' => 'dzi', 'Duzib213G0506' => 'dzi', 'Duzib235G0289' => 'dzi', 'Duzib251G0422' => 'dzi', 'ECA232G3898' => 'eca', 'ECA233G5950' => 'eca', 'ECA234G1699' => 'eca', 'ECA234G2421' => 'eca', 'ECA236G0426' => 'eca', 'ECA236G4331' => 'eca', 'ECA248G2573' => 'eca', 'EL10Ac1g00077' => 'bvu', 'EL10Ac1g01746' => 'bvu', 'EL10Ac2g03464' => 'bvu', 'EL10Ac4g08176' => 'bvu', 'EL10Ac7g17521' => 'bvu', 'EL10Ac8g20386' => 'bvu', 'EL10Ac9g21343' => 'bvu', 'EL10Ac9g22688' => 'bvu', 'Eucgr.B03434' => 'egr', 'Eucgr.D00618' => 'egr', 'Eucgr.E02395' => 'egr', 'Eucgr.F01129' => 'egr', 'Eucgr.F02622' => 'egr', 'Eucgr.F04207' => 'egr', 'FAN01G0570' => 'fan', 'FAN03G3351' => 'fan', 'FAN06G3702' => 'fan', 'FAN07G2149' => 'fan', 'FAN10G3758' => 'fan', 'FAN11G1170' => 'fan', 'FAN11G2050' => 'fan', 'FAN11G2724' => 'fan', 'FAN12G1700' => 'fan', 'FAN12G2028' => 'fan', 'FAN15G1160' => 'fan', 'FAN15G3063' => 'fan', 'FAN16G2540' => 'fan', 'FAN16G3077' => 'fan', 'FAN16G3624' => 'fan', 'FAN17G0221' => 'fan', 'FAN20G2492' => 'fan', 'FAN20G2905' => 'fan', 'FAN21G0548' => 'fan', 'FAN21G1300' => 'fan', 'FAN22G0077' => 'fan', 'FAN22G1315' => 'fan', 'FAN24G1280' => 'fan', 'FAN24G1445' => 'fan', 'FAN24G3527' => 'fan', 'FAN25G0464' => 'fan', 'FAN25G2885' => 'fan', 'FAN25G3270' => 'fan', 'FAN27G1101' => 'fan', 'FAN27G2846' => 'fan', 'FAN27G3524' => 'fan', 'FvH4_2g11770' => 'fve', 'FvH4_2g15630' => 'fve', 'FvH4_3g05570' => 'fve', 'FvH4_3g09110' => 'fve', 'FvH4_3g19940' => 'fve', 'FvH4_4g04821' => 'fve', 'FvH4_4g31480' => 'fve', 'FvH4_7g01740' => 'fve', 'Glyma.05G130400' => 'gma', 'Glyma.05G156400' => 'gma', 'Glyma.07G197000' => 'gma', 'Glyma.08G085151' => 'gma', 'Glyma.08G114500' => 'gma', 'Glyma.08G300400' => 'gma', 'Glyma.10G215800' => 'gma', 'Glyma.12G224400' => 'gma', 'Glyma.13G179300' => 'gma', 'Glyma.13G218151' => 'gma', 'Glyma.13G238800' => 'gma', 'Glyma.13G276900' => 'gma', 'Glyma.14G078200' => 'gma', 'Glyma.15G074500' => 'gma', 'Glyma.15G094100' => 'gma', 'Glyma.17G247200' => 'gma', 'Glyma.18G120100' => 'gma', 'Glyma.20G176000' => 'gma', 'Gohir.A01G063600' => 'ghi', 'Gohir.A01G170301' => 'ghi', 'Gohir.A02G060500' => 'ghi', 'Gohir.A05G133850' => 'ghi', 'Gohir.A05G161400' => 'ghi', 'Gohir.A06G012900' => 'ghi', 'Gohir.A06G035901' => 'ghi', 'Gohir.A06G127100' => 'ghi', 'Gohir.A06G210500' => 'ghi', 'Gohir.A08G008650' => 'ghi', 'Gohir.A09G072700' => 'ghi', 'Gohir.A09G088301' => 'ghi', 'Gohir.A10G040600' => 'ghi', 'Gohir.A12G036300' => 'ghi', 'Gohir.A12G143350' => 'ghi', 'Gohir.A12G165500' => 'ghi', 'Gohir.A13G145700' => 'ghi', 'Gohir.D01G050000' => 'ghi', 'Gohir.D01G051366' => 'ghi', 'Gohir.D01G161350' => 'ghi', 'Gohir.D02G065900' => 'ghi', 'Gohir.D05G164200' => 'ghi', 'Gohir.D05G355500' => 'ghi', 'Gohir.D06G010400' => 'ghi', 'Gohir.D06G111250' => 'ghi', 'Gohir.D06G132000' => 'ghi', 'Gohir.D06G210500' => 'ghi', 'Gohir.D07G165675' => 'ghi', 'Gohir.D08G062240' => 'ghi', 'Gohir.D08G086101' => 'ghi', 'Gohir.D08G138060' => 'ghi', 'Gohir.D09G072300' => 'ghi', 'Gohir.D10G041400' => 'ghi', 'Gohir.D11G191020' => 'ghi', 'Gohir.D11G212066' => 'ghi', 'Gohir.D12G036300' => 'ghi', 'Gohir.D12G168600' => 'ghi', 'Gohir.D13G150600' => 'ghi', 'Gorai.001G057300' => 'gra', 'Gorai.002G069900' => 'gra', 'Gorai.002G200000' => 'gra', 'Gorai.003G067600' => 'gra', 'Gorai.005G074800' => 'gra', 'Gorai.006G087300' => 'gra', 'Gorai.008G037500' => 'gra', 'Gorai.008G181400' => 'gra', 'Gorai.009G169400' => 'gra', 'Gorai.009G387900' => 'gra', 'Gorai.010G013300' => 'gra', 'Gorai.010G153800' => 'gra', 'Gorai.010G255800' => 'gra', 'Gorai.011G043700' => 'gra', 'Gorai.011G198900' => 'gra', 'Gorai.013G168400' => 'gra', 'GSVIVG01005212001' => 'vvi', 'GSVIVG01006163001' => 'vvi', 'GSVIVG01009625001' => 'vvi', 'GSVIVG01014338001' => 'vvi', 'GSVIVG01020005001' => 'vvi', 'GSVIVG01021450001' => 'vvi', 'GSVIVG01023975001' => 'vvi', 'GSVIVG01034490001' => 'vvi', 'HanXRQChr04g0112071' => 'han', 'HanXRQChr05g0131151' => 'han', 'HanXRQChr09g0262371' => 'han', 'HanXRQChr09g0268401' => 'han', 'HanXRQChr10g0279241' => 'han', 'HanXRQChr10g0297961' => 'han', 'HanXRQChr11g0326231' => 'han', 'HanXRQChr11g0328471' => 'han', 'HanXRQChr16g0507941' => 'han', 'HanXRQChr17g0560211' => 'han', 'Haze_02108' => 'cav', 'Haze_02428' => 'cav', 'Haze_05593' => 'cav', 'Haze_06448' => 'cav', 'Haze_09427' => 'cav', 'Haze_12022' => 'cav', 'Haze_17612' => 'cav', 'Haze_17928' => 'cav', 'Hma1.2p1_0032F.1_g019250' => 'hma', 'Hma1.2p1_0163F.1_g072690' => 'hma', 'Hma1.2p1_0265F.1_g106710' => 'hma', 'Hma1.2p1_0286F.1_g113970' => 'hma', 'Hma1.2p1_0363F.1_g136640' => 'hma', 'Hma1.2p1_0584F.1_g183470' => 'hma', 'Hma1.2p1_0885F.1_g232570' => 'hma', 'HPP92_006022' => 'vpl', 'HPP92_007320' => 'vpl', 'HPP92_011521' => 'vpl', 'HPP92_019387' => 'vpl', 'HPP92_024038' => 'vpl', 'Hund05891' => 'sun', 'Hund06450' => 'sun', 'Hund12053' => 'sun', 'Hund16800' => 'sun', 'Hund21222' => 'sun', 'Hund22896' => 'sun', 'Hund23746' => 'sun', 'Hund27083' => 'sun', 'Lalb_Chr02g0141831' => 'lal', 'Lalb_Chr02g0141841' => 'lal', 'Lalb_Chr05g0220411' => 'lal', 'Lalb_Chr06g0162081' => 'lal', 'Lalb_Chr09g0327651' => 'lal', 'Lalb_Chr13g0295051' => 'lal', 'Lalb_Chr15g0086801' => 'lal', 'Lalb_Chr16g0383781' => 'lal', 'Lalb_Chr16g0383791' => 'lal', 'Lalb_Chr18g0055441' => 'lal', 'Lalb_Chr18g0059611' => 'lal', 'Lalb_Chr20g0109661' => 'lal', 'Lalb_Chr20g0109831' => 'lal', 'Lalb_Chr20g0121871' => 'lal', 'Lalb_Chr22g0355361' => 'lal', 'Lalb_Chr25g0286371' => 'lal', 'Lj1A1187G43' => 'lonja', 'Lj1A1205T50' => 'lonja', 'Lj1A800G33' => 'lonja', 'Lj1C1187T7' => 'lonja', 'Lj1C843T11' => 'lonja', 'Lj1g0010940' => 'lja', 'Lj2A288T69' => 'lonja', 'Lj3g0024276' => 'lja', 'Lj4A47T76' => 'lonja', 'Lj4g0005805' => 'lja', 'Lj4g0006097' => 'lja', 'Lj4g0008528' => 'lja', 'Lj4g0024907' => 'lja', 'Lj5g0012472' => 'lja', 'Lj5g0018648' => 'lja', 'Lj6C789G1' => 'lonja', 'Lj6g0004000' => 'lja', 'Lj7A292G67' => 'lonja', 'Lj7A292T64' => 'lonja', 'Lj9A400T58' => 'lonja', 'Lsat_1_v5_gn_1_126181' => 'lsa', 'Lsat_1_v5_gn_4_123041' => 'lsa', 'Lsat_1_v5_gn_4_133620' => 'lsa', 'Lsat_1_v5_gn_4_53221' => 'lsa', 'Lsat_1_v5_gn_4_71961' => 'lsa', 'Lsat_1_v5_gn_7_105241' => 'lsa', 'Lsat_1_v5_gn_7_21361' => 'lsa', 'Lsat_1_v5_gn_7_28860' => 'lsa', 'Lsat_1_v5_gn_7_31260' => 'lsa', 'Lsat_1_v5_gn_8_52801' => 'lsa', 'Manes.02G191400' => 'mes', 'Manes.03G110100' => 'mes', 'Manes.04G071100' => 'mes', 'Manes.05G100500' => 'mes', 'Manes.05G164700' => 'mes', 'Manes.15G087000' => 'mes', 'Manes.15G121500' => 'mes', 'Manes.16G028300' => 'mes', 'Manes.17G046100' => 'mes', 'Manes.17G069800' => 'mes', 'Manes.18G100500' => 'mes', 'Mapoly0002s0109' => 'mpo', 'Mapoly0024s0007' => 'mpo', 'Mapoly0089s0032' => 'mpo', 'MBI04_g42241_MAGBIO' => 'mbi', 'MBI05_g11988_MAGBIO' => 'mbi', 'MBI05_g35452_MAGBIO' => 'mbi', 'MBI07_g30179_MAGBIO' => 'mbi', 'MBI07_g35859_MAGBIO' => 'mbi', 'MBI07_g35860_MAGBIO' => 'mbi', 'MBI07_g37166_MAGBIO' => 'mbi', 'MBI08_g18172_MAGBIO' => 'mbi', 'MBI09_g08441_MAGBIO' => 'mbi', 'MBI13_g01676_MAGBIO' => 'mbi', 'MBI14_g42955_MAGBIO' => 'mbi', 'MBI16_g13161_MAGBIO' => 'mbi', 'MBI17_g27204_MAGBIO' => 'mbi', 'MBI19_g21595_MAGBIO' => 'mbi', 'MD00G1148400' => 'mdo', 'MD02G1301200' => 'mdo', 'MD03G1227800' => 'mdo', 'MD05G1041100' => 'mdo', 'MD05G1124800' => 'mdo', 'MD05G1284000' => 'mdo', 'MD05G1338800' => 'mdo', 'MD05G1338900' => 'mdo', 'MD07G1022800' => 'mdo', 'MD10G1047500' => 'mdo', 'MD10G1127500' => 'mdo', 'MD10G1262300' => 'mdo', 'MD10G1293800' => 'mdo', 'MD16G1074300' => 'mdo', 'Medtr1g021670' => 'mtr', 'Medtr1g096320' => 'mtr', 'Medtr2g013690' => 'mtr', 'Medtr2g019450' => 'mtr', 'Medtr2g085170' => 'mtr', 'Medtr4g088785' => 'mtr', 'Medtr8g055930' => 'mtr', 'Medtr8g085850' => 'mtr', 'MELO3C002605.2' => 'cme', 'MELO3C003891.2' => 'cme', 'MELO3C004012.2' => 'cme', 'MELO3C007134.2' => 'cme', 'MELO3C008118.2' => 'cme', 'MELO3C016700.2' => 'cme', 'MELO3C024127.2' => 'cme', 'MELO3C033361.2' => 'cme', 'MELO3C033362.2' => 'cme', 'Migut.C00430' => 'egut', 'Migut.C01246' => 'egut', 'Migut.E00101' => 'egut', 'Migut.H01486' => 'egut', 'Migut.H01939' => 'egut', 'Migut.K00360' => 'egut', 'Migut.M00910' => 'egut', 'Migut.M01139' => 'egut', 'Migut.N02677' => 'egut', 'MSTRG.13252' => 'ama', 'MSTRG.14701' => 'ama', 'MSTRG.1521' => 'ama', 'MSTRG.15884' => 'ama', 'MSTRG.16242' => 'ama', 'MSTRG.22285' => 'ama', 'MSTRG.22444' => 'ama', 'MSTRG.2349' => 'ama', 'MSTRG.26308' => 'ama', 'MSTRG.28296' => 'ama', 'MSTRG.9895' => 'ama', 'Nitab4.5_0000110g0060' => 'nta', 'Nitab4.5_0000420g0130' => 'nta', 'Nitab4.5_0000422g0030' => 'nta', 'Nitab4.5_0000560g0180' => 'nta', 'Nitab4.5_0000703g0100' => 'nta', 'Nitab4.5_0000786g0200' => 'nta', 'Nitab4.5_0001336g0020' => 'nta', 'Nitab4.5_0001796g0030' => 'nta', 'Nitab4.5_0003348g0060' => 'nta', 'Nitab4.5_0003698g0040' => 'nta', 'Nitab4.5_0003942g0090' => 'nta', 'Nitab4.5_0004775g0070' => 'nta', 'Nitab4.5_0004864g0030' => 'nta', 'Nitab4.5_0005615g0020' => 'nta', 'Nitab4.5_0009288g0030' => 'nta', 'Nitab4.5_0009341g0010' => 'nta', 'Nitab4.5_0009535g0010' => 'nta', 'Nn1g03995' => 'nnu', 'Nn1g04100' => 'nnu', 'Nn1g06530' => 'nnu', 'Nn3g16404' => 'nnu', 'Nn3g17212' => 'nnu', 'Nn3g20776' => 'nnu', 'Nn3g21923' => 'nnu', 'Nn5g27737' => 'nnu', 'Nn5g29461' => 'nnu', 'Nn7g38355' => 'nnu', 'Nn8g39873' => 'nnu', 'Oeu000548.2' => 'oeu', 'Oeu004672.1' => 'oeu', 'Oeu015605.2' => 'oeu', 'Oeu016092.1' => 'oeu', 'Oeu017879.3' => 'oeu', 'Oeu024910.1' => 'oeu', 'Oeu028965.1' => 'oeu', 'Oeu031269.1' => 'oeu', 'Oeu031270.1' => 'oeu', 'Oeu032535.1' => 'oeu', 'Oeu034151.1' => 'oeu', 'Oeu034152.1' => 'oeu', 'Oeu034588.2' => 'oeu', 'Oeu050846.1' => 'oeu', 'Oeu050849.2' => 'oeu', 'Oeu051063.2' => 'oeu', 'Oeu052368.1' => 'oeu', 'Oeu052370.1' => 'oeu', 'Os01g0210400' => 'osa', 'Os01g0304300' => 'osa', 'Os01g0749100' => 'osa', 'Os02g0745800' => 'osa', 'Os03g0769050' => 'osa', 'Os05g0531500' => 'osa', 'Os06g0724300' => 'osa', 'Os11g0198100' => 'osa', 'Peaxi162Scf00069g01425' => 'pax', 'Peaxi162Scf00280g00811' => 'pax', 'Peaxi162Scf00310g00615' => 'pax', 'Peaxi162Scf00362g00542' => 'pax', 'Peaxi162Scf00461g00310' => 'pax', 'Peaxi162Scf00530g00118' => 'pax', 'Peaxi162Scf00541g00057' => 'pax', 'Peaxi162Scf00661g00017' => 'pax', 'Peaxi162Scf00926g00027' => 'pax', 'Peaxi162Scf01064g00263' => 'pax', 'Peaxi162Scf01211g00135' => 'pax', 'PGR004G2336' => 'pgr', 'PGR042G0327' => 'pgr', 'PGR042G1957' => 'pgr', 'PGR042G2003' => 'pgr', 'PGR042G3929' => 'pgr', 'PGR083G1137' => 'pgr', 'PGR083G1364' => 'pgr', 'PGSC0003DMG400003381' => 'stu', 'PGSC0003DMG400003417' => 'stu', 'PGSC0003DMG400008981' => 'stu', 'PGSC0003DMG400012417' => 'stu', 'PGSC0003DMG400012823' => 'stu', 'PGSC0003DMG400016885' => 'stu', 'PGSC0003DMG400022812' => 'stu', 'PGSC0003DMG400029726' => 'stu', 'PGSC0003DMG401009243' => 'stu', 'PGSC0003DMG401031505' => 'stu', 'PGSC0003DMG402031505' => 'stu', 'Phvul.001G017600' => 'pvu', 'Phvul.002G193500' => 'pvu', 'Phvul.002G228900' => 'pvu', 'Phvul.002G236800' => 'pvu', 'Phvul.003G049500' => 'pvu', 'Phvul.005G072000' => 'pvu', 'Phvul.006G164800' => 'pvu', 'Phvul.006G185100' => 'pvu', 'Phvul.007G090000' => 'pvu', 'Potri.001G399800' => 'ptr', 'Potri.002G149900' => 'ptr', 'Potri.004G044100' => 'ptr', 'Potri.004G177600' => 'ptr', 'Potri.009G138000' => 'ptr', 'Potri.010G094000' => 'ptr', 'Potri.011G053000' => 'ptr', 'Potri.011G119300' => 'ptr', 'Potri.013G113700' => 'ptr', 'Potri.018G107800' => 'ptr', 'Potri.019G084100' => 'ptr', 'Pp3c14_23720' => 'ppa', 'Pp3c16_6340' => 'ppa', 'Pp3c23_13420' => 'ppa', 'Pp3c24_2740' => 'ppa', 'Pp3c25_860' => 'ppa', 'Pp3c8_21750' => 'ppa', 'Prupe.1G273000' => 'ppe', 'Prupe.1G273700' => 'ppe', 'Prupe.1G274100' => 'ppe', 'Prupe.2G023300' => 'ppe', 'Prupe.4G048000' => 'ppe', 'Prupe.4G080400' => 'ppe', 'Prupe.4G181200' => 'ppe', 'Prupe.8G056900' => 'ppe', 'Prupe.8G168700' => 'ppe', 'Psat1g189080' => 'psa', 'Psat1g204760' => 'psa', 'Psat4g175560' => 'psa', 'Psat4g177720' => 'psa', 'Psat5g244240' => 'psa', 'Psat6g010720' => 'psa', 'Psat6g187200' => 'psa', 'Psat7g072040' => 'psa', 'PSO017G3501' => 'pso', 'PSO063G2148' => 'pso', 'PSO063G5608' => 'pso', 'PSO210G6392' => 'pso', 'PSO541G2319' => 'pso', 'PSO541G2836' => 'pso', 'PSO541G4012' => 'pso', 'PSO541G6253' => 'pso', 'PSO675G0580' => 'pso', 'PSO675G0856' => 'pso', 'PSO675G5635' => 'pso', 'PSO675G9157' => 'pso', 'PSO832G1660' => 'pso', 'PSO832G1969' => 'pso', 'QL02p007186' => 'qlo', 'QL02p033904' => 'qlo', 'QL03p064391' => 'qlo', 'QL05p040593' => 'qlo', 'QL05p058242' => 'qlo', 'QL08p021825' => 'qlo', 'QL11p004981' => 'qlo', 'RcHm_v2.0_Chr1g0318301' => 'rch', 'RcHm_v2.0_Chr4g0418501' => 'rch', 'RcHm_v2.0_Chr4g0439971' => 'rch', 'RcHm_v2.0_Chr5g0008541' => 'rch', 'RcHm_v2.0_Chr5g0014101' => 'rch', 'RcHm_v2.0_Chr5g0014131' => 'rch', 'RcHm_v2.0_Chr5g0033621' => 'rch', 'RcHm_v2.0_Chr6g0272041' => 'rch', 'RcHm_v2.0_Chr6g0278831' => 'rch', 'Rhsim02G0130400' => 'rsi', 'Rhsim02G0171100' => 'rsi', 'Rhsim05G0053000' => 'rsi', 'Rhsim05G0053100' => 'rsi', 'Rhsim06G0096500' => 'rsi', 'Rhsim06G0096600' => 'rsi', 'Rhsim06G0199100' => 'rsi', 'Rhsim12G0062300' => 'rsi', 'Rhsim12G0062800' => 'rsi', 'Sabra02G0118600' => 'sbr', 'Sabra04G0027300' => 'sbr', 'Sabra04G0119500' => 'sbr', 'Sabra08G0112500' => 'sbr', 'Sabra11G0036800' => 'sbr', 'Sabra11G0103800' => 'sbr', 'Sabra13G0096300' => 'sbr', 'Sabra16G0262300' => 'sbr', 'Sabra18G0091700' => 'sbr', 'Sabra19G0095400' => 'sbr', 'SalBow6G3080' => 'sbo', 'SalBow7G1157' => 'sbo', 'SalBow7G2123' => 'sbo', 'SalBow7G2285' => 'sbo', 'SalBow7G3537' => 'sbo', 'SalBow8G2947' => 'sbo', 'SalBow8G4463' => 'sbo', 'SalBow8G5466' => 'sbo', 'Sc01g0001750' => 'sci', 'Sc02g0006640' => 'sci', 'Sc02g0006670' => 'sci', 'Sc04g0008220' => 'sci', 'Sc05g0006190' => 'sci', 'Sc08g0002760' => 'sci', 'Sc17g0006170' => 'sci', 'Sc22g0002050' => 'sci', 'Sc23g0001190' => 'sci', 'Sc24g0000980' => 'sci', 'Sed0006245' => 'sed', 'Sed0007543' => 'sed', 'Sed0009411' => 'sed', 'Sed0010765' => 'sed', 'Sed0012944' => 'sed', 'Sed0014682' => 'sed', 'Sed0016174' => 'sed', 'Sed0016796' => 'sed', 'Sed0020317' => 'sed', 'Sed0021467' => 'sed', 'SEGI_01316' => 'sgi', 'SEGI_03374' => 'sgi', 'SEGI_16265' => 'sgi', 'SEGI_18569' => 'sgi', 'SEGI_20351' => 'sgi', 'SEGI_26395' => 'sgi', 'SEGI_29469' => 'sgi', 'SEGI_34771' => 'sgi', 'SEGI_36769' => 'sgi', 'SEGI_37139' => 'sgi', 'SGA_v2.0_scaffold100G29687' => 'sas', 'SGA_v2.0_scaffold118G32472' => 'sas', 'SGA_v2.0_scaffold14G07051' => 'sas', 'SGA_v2.0_scaffold183G39845' => 'sas', 'SGA_v2.0_scaffold1G00174' => 'sas', 'SGA_v2.0_scaffold22G09714' => 'sas', 'SGA_v2.0_scaffold333G48992' => 'sas', 'SGA_v2.0_scaffold46G17491' => 'sas', 'SGA_v2.0_scaffold49G18294' => 'sas', 'SGA_v2.0_scaffold63G21658' => 'sas', 'SHI01741' => 'shi', 'SHI05771' => 'shi', 'SHI18077' => 'shi', 'SHI20525' => 'shi', 'SHI20527' => 'shi', 'SHI20528' => 'shi', 'SMO172G0185' => 'smo', 'SMO198G0020' => 'smo', 'SMO351G0006' => 'smo', 'SMO356G0118' => 'smo', 'SMO358G0296' => 'smo', 'SMO367G0079' => 'smo', 'SMO367G1277' => 'smo', 'Solyc01g014220.3' => 'sly', 'Solyc01g111770.2' => 'sly', 'Solyc02g078180.3' => 'sly', 'Solyc03g006430.3' => 'sly', 'Solyc03g006456.1' => 'sly', 'Solyc03g079860.2' => 'sly', 'Solyc04g079770.3' => 'sly', 'Solyc05g007430.4' => 'sly', 'Solyc07g063150.3' => 'sly', 'Solyc08g016620.3' => 'sly', 'Solyc09g057590.3' => 'sly', 'Solyc09g057600.1' => 'sly', 'Solyc10g009050.3' => 'sly', 'Solyc11g017420.2' => 'sly', 'Sopen01g053810' => 'spe', 'Sopen02g023040' => 'spe', 'Sopen03g002440' => 'spe', 'Sopen04g033350' => 'spe', 'Sopen05g003310' => 'spe', 'Sopen07g004050' => 'spe', 'Sopen07g031340' => 'spe', 'Sopen08g006990' => 'spe', 'Sopen10g004830' => 'spe', 'Sopen11g009370' => 'spe', 'Sp1g24450' => 'spa', 'Sp1g29670' => 'spa', 'Sp1g39600' => 'spa', 'Sp2g11080' => 'spa', 'Sp2g13970' => 'spa', 'Sp4g16130' => 'spa', 'Sp6g13080' => 'spa', 'Sp7g37270' => 'spa', 'TAR371G0065' => 'tar', 'TAR376G0340' => 'tar', 'TAR376G0435' => 'tar', 'TAR381G0002' => 'tar', 'TAR381G1236' => 'tar', 'TAR624G0055' => 'tar', 'TAR624G0324' => 'tar', 'TAR624G0696' => 'tar', 'TAR624G0906' => 'tar', 'TAR625G0107' => 'tar', 'TAR626G0015' => 'tar', 'TAR626G1356' => 'tar', 'TAR627G0888' => 'tar', 'TAR628G0399' => 'tar', 'TAR628G1327' => 'tar', 'TAR629G2831' => 'tar', 'TAR629G2874' => 'tar', 'TAR633G1432' => 'tar', 'TAR633G2771' => 'tar', 'THA.LOC104803394' => 'tha', 'THA.LOC104805153' => 'tha', 'THA.LOC104806784' => 'tha', 'THA.LOC104810473' => 'tha', 'THA.LOC104813100' => 'tha', 'THA.LOC104814215' => 'tha', 'THA.LOC104815554' => 'tha', 'THA.LOC104820544' => 'tha', 'THA.LOC104824754' => 'tha', 'THA.LOC104827717' => 'tha', 'Thecc.02G031400' => 'tca', 'Thecc.02G055900' => 'tca', 'Thecc.02G350800' => 'tca', 'Thecc.06G150900' => 'tca', 'Thecc.06G186600' => 'tca', 'Thecc.07G089600' => 'tca', 'Thecc.08G020400' => 'tca', 'Thecc.08G182100' => 'tca', 'Thhalv10000873m.g' => 'esa', 'Thhalv10004185m.g' => 'esa', 'Thhalv10006981m.g' => 'esa', 'Thhalv10007204m.g' => 'esa', 'Thhalv10011374m.g' => 'esa', 'Thhalv10013482m.g' => 'esa', 'Thhalv10017801m.g' => 'esa', 'Thhalv10024983m.g' => 'esa', 'TPR.G12072' => 'tpr', 'TPR.G15769' => 'tpr', 'TPR.G16504' => 'tpr', 'TPR.G16506' => 'tpr', 'TPR.G24345' => 'tpr', 'TPR.G26666' => 'tpr', 'TPR.G27320' => 'tpr', 'TPR.G31819' => 'tpr', 'TPR.G38879' => 'tpr', 'TPR.G39015' => 'tpr', 'TPR.G8819' => 'tpr', 'TWI09G0924' => 'twi', 'TWI12G0811' => 'twi', 'TWI12G1294' => 'twi', 'TWI31G0150' => 'twi', 'TWI36G1262' => 'twi', 'TWI38G1287' => 'twi', 'TWI38G1633' => 'twi', 'TWI38G1982' => 'twi', 'TWI39G0116' => 'twi', 'TWI60G1011' => 'twi', 'TWI63G0171' => 'twi', 'TWI73G0839' => 'twi', 'TWI79G1511' => 'twi', 'unitig_0.g915' => 'ugi', 'unitig_0.g916' => 'ugi', 'unitig_21.g20219' => 'ugi', 'unitig_21.g20416' => 'ugi', 'unitig_578.g16132' => 'ugi', 'unitig_578.g16718' => 'ugi', 'unitig_62.g23481' => 'ugi', 'unitig_744.g24535' => 'ugi', 'unitig_749.g13525' => 'ugi', 'vmacro01248' => 'vma', 'vmacro02290' => 'vma', 'vmacro10946' => 'vma', 'vmacro11865' => 'vma', 'vmacro12493' => 'vma', 'vmacro17322' => 'vma', 'vmacro21599' => 'vma', 'vmacro23041' => 'vma', 'VMungo0251G0004' => 'vmu', 'VMungo0251G2639' => 'vmu', 'VMungo0251G2967' => 'vmu', 'VMungo0540G0864' => 'vmu', 'VMungo0540G1569' => 'vmu', 'VMungo0647G0317' => 'vmu', 'VMungo0720G1373' => 'vmu', 'VMungo0720G1508' => 'vmu', 'VMungo1080G0485' => 'vmu', 'VMungo1215G3177' => 'vmu', 'Zm00001eb112600' => 'zma', 'Zm00001eb120220' => 'zma', 'Zm00001eb153240' => 'zma', 'Zm00001eb168880' => 'zma', 'Zm00001eb213920' => 'zma', 'Zm00001eb228280' => 'zma', 'Zm00001eb254580' => 'zma', 'Zm00001eb272180' => 'zma', 'Zm00001eb293190' => 'zma', 'Zm00001eb322930' => 'zma', 'Zm00001eb353360' => 'zma', 'Zm00001eb353390' => 'zma', 'Zm00001eb353430' => 'zma', 'Zm00001eb353440' => 'zma', 'Zm00001eb353780' => 'zma' ) $gf_id = 'HOM05D000499' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000499' ) $data_identifier = 'HOM05D000499' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 29, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 12, 'amhyb' => (int) 8, 'aly' => (int) 12, 'aox' => (int) 9, 'arhy' => (int) 26, 'ath' => (int) 8, 'atr' => (int) 7, 'acertr' => (int) 10, 'cqu' => (int) 15, 'bca' => (int) 29, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 11, 'cansat' => (int) 8, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 9, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 8, 'cpa' => (int) 10, 'csa' => (int) 7, 'camsi' => (int) 20, 'dca' => (int) 8, 'din' => (int) 12, 'dzi' => (int) 14, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 6, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 38, 'gra' => (int) 16, 'vvi' => (int) 8, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 5, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 11, 'lja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 11, 'mpo' => (int) 3, 'mbi' => (int) 14, 'mdo' => (int) 14, 'mtr' => (int) 8, 'cme' => (int) 9, 'egut' => (int) 9, 'ama' => (int) 11, 'nta' => (int) 17, 'nnu' => (int) 11, 'oeu' => (int) 18, 'osa' => (int) 8, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 6, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 9, 'rsi' => (int) 9, 'sbr' => (int) 10, 'sbo' => (int) 8, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 10, 'sas' => (int) 10, 'shi' => (int) 6, 'smo' => (int) 7, 'sly' => (int) 14, 'spe' => (int) 10, 'spa' => (int) 8, 'tar' => (int) 19, 'tha' => (int) 10, 'tca' => (int) 8, 'esa' => (int) 8, 'tpr' => (int) 11, 'twi' => (int) 13, 'ugi' => (int) 9, 'vma' => (int) 8, 'vmu' => (int) 10, 'zma' => (int) 15 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb353780' $species_info = array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ) $local_species = 'tar' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000499', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1066', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p29780' => 'bna', 'A02p33180' => 'bna', 'A03p16470' => 'bna', 'A03p66010' => 'bna', 'A04p25970' => 'bna', 'A06p01270' => 'bna', 'A06p46080' => 'bna', 'A07p11400' => 'bna', 'A08p01840' => 'bna', 'A08p08230' => 'bna', 'A08p25740' => 'bna', 'A09p32070' => 'bna', 'A09p37830' => 'bna', 'A09p42840' => 'bna', 'A09p42850' => 'bna', 'Aa31LG10G2060' => 'aar', 'Aa31LG2G7410' => 'aar', 'Aa31LG6G10200' => 'aar', 'Aa31LG6G16680' => 'aar', 'Aa31LG6G8470' => 'aar', 'Aa31LG9G12730' => 'aar', 'Aa31LG9G13680' => 'aar', 'Aa31LG9G14920' => 'aar', 'Aa31LG9G6650' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4977' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5467' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3254' => 'aag', 'Actinidia02578' => 'ach', 'Actinidia07693' => 'ach', 'Actinidia08413' => 'ach', 'Actinidia08414' => 'ach', 'Actinidia15289' => 'ach', 'Actinidia19871' => 'ach', 'Actinidia21475' => 'ach', 'Actinidia22576' => 'ach', 'Actinidia28327' => 'ach', 'Actinidia32491' => 'ach', 'Actinidia39463' => 'ach', 'Actinidia39571' => 'ach', 'Ah.01g013750' => 'amhyb', 'Ah.01g023210' => 'amhyb', 'Ah.04g164850' => 'amhyb', 'Ah.05g178060' => 'amhyb', 'Ah.07g204270' => 'amhyb', 'Ah.07g208480' => 'amhyb', 'Ah.09g237410' => 'amhyb', 'Ah.14g089460' => 'amhyb', 'AL1G41790' => 'aly', 'AL1G49050' => 'aly', 'AL1G53810' => 'aly', 'AL1G61400' => 'aly', 'AL4G18580' => 'aly', 'AL5G12510' => 'aly', 'AL5G12540' => 'aly', 'AL6G43230' => 'aly', 'AL7G10370' => 'aly', 'AL7G19250' => 'aly', 'AL8G12240' => 'aly', 'AL8G18540' => 'aly', 'Aqoxy1G02409' => 'aox', 'Aqoxy2G03993' => 'aox', 'Aqoxy3G03357' => 'aox', 'Aqoxy4G00785' => 'aox', 'Aqoxy5G02598' => 'aox', 'Aqoxy6G00132' => 'aox', 'Aqoxy7G01776' => 'aox', 'Aqoxy7G02316' => 'aox', 'Aqoxy7G03973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.12AFKW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B8730' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27IQR1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3F75VG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3RE0GA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41TCQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.527VTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FIR39' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5W8UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DA38EV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ63HS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H1I32C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HC27T5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4M8AP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7N3CZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9UVDZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LS1NQA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT1D4B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SKC4TM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCFV76' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF9Q1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQWD9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1ZM88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WE07RT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YCK7VH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJE6Q6' => 'arhy', 'AT1G28240' => 'ath', 'AT1G34550' => 'ath', 'AT1G53040' => 'ath', 'AT2G02910' => 'ath', 'AT4G09630' => 'ath', 'AT4G38500' => 'ath', 'AT5G42660' => 'ath', 'AT5G46220' => 'ath', 'ATR0152G026' => 'atr', 'ATR0564G343' => 'atr', 'ATR0706G151' => 'atr', 'ATR0733G207' => 'atr', 'ATR0751G234' => 'atr', 'ATR0807G048' => 'atr', 'ATR1091G084' => 'atr', 'Atru.chr10.1229' => 'acertr', 'Atru.chr10.1230' => 'acertr', 'Atru.chr10.1874' => 'acertr', 'Atru.chr11.1808' => 'acertr', 'Atru.chr13.1795' => 'acertr', 'Atru.chr13.570' => 'acertr', 'Atru.chr2.2608' => 'acertr', 'Atru.chr2.2609' => 'acertr', 'Atru.chr5.3428' => 'acertr', 'Atru.chr8.1171' => 'acertr', 'AUR62004651' => 'cqu', 'AUR62008675' => 'cqu', 'AUR62010014' => 'cqu', 'AUR62013004' => 'cqu', 'AUR62014825' => 'cqu', 'AUR62015015' => 'cqu', 'AUR62015151' => 'cqu', 'AUR62017020' => 'cqu', 'AUR62019422' => 'cqu', 'AUR62023570' => 'cqu', 'AUR62025571' => 'cqu', 'AUR62029098' => 'cqu', 'AUR62033863' => 'cqu', 'AUR62034296' => 'cqu', 'AUR62040075' => 'cqu', 'BcaB02g07334' => 'bca', 'BcaB02g10575' => 'bca', 'BcaB03g12119' => 'bca', 'BcaB03g12120' => 'bca', 'BcaB03g13945' => 'bca', 'BcaB04g17123' => 'bca', 'BcaB04g17867' => 'bca', 'BcaB04g19839' => 'bca', 'BcaB07g30317' => 'bca', 'BcaB07g32432' => 'bca', 'BcaB07g33362' => 'bca', 'BcaB08g36611' => 'bca', 'BcaC01g00028' => 'bca', 'BcaC01g01356' => 'bca', 'BcaC01g02034' => 'bca', 'BcaC01g06051' => 'bca', 'BcaC03g16839' => 'bca', 'BcaC03g17176' => 'bca', 'BcaC05g26829' => 'bca', 'BcaC06g31490' => 'bca', 'BcaC06g35344' => 'bca', 'BcaC06g36570' => 'bca', 'BcaC07g37537' => 'bca', 'BcaC08g43491' => 'bca', 'BcaC08g43773' => 'bca', 'BcaNung00234' => 'bca', 'BcaNung01982' => 'bca', 'BcaNung03707' => 'bca', 'BcaNung06454' => 'bca', 'BolC2t10762H' => 'bol', 'BolC2t11191H' => 'bol', 'BolC3t14322H' => 'bol', 'BolC3t19747H' => 'bol', 'BolC3t21425H' => 'bol', 'BolC4t27800H' => 'bol', 'BolC5t31423H' => 'bol', 'BolC6t35951H' => 'bol', 'BolC6t36282H' => 'bol', 'BolC7t40678H' => 'bol', 'BolC7t40679H' => 'bol', 'BolC7t42222H' => 'bol', 'BolC7t43492H' => 'bol', 'BolC7t46785H' => 'bol', 'BolC8t47853H' => 'bol', 'BolC9t56805H' => 'bol', 'BraA02t08000Z' => 'bra', 'BraA02t08341Z' => 'bra', 'BraA03t10936Z' => 'bra', 'BraA03t15657Z' => 'bra', 'BraA04t18100Z' => 'bra', 'BraA05t20523Z' => 'bra', 'BraA06t23353Z' => 'bra', 'BraA06t27473Z' => 'bra', 'BraA06t27769Z' => 'bra', 'BraA07t28928Z' => 'bra', 'BraA08t32236Z' => 'bra', 'BraA08t32841Z' => 'bra', 'BraA08t34524Z' => 'bra', 'BraA09t38742Z' => 'bra', 'BraA09t39295Z' => 'bra', 'C02p47180' => 'bna', 'C02p50990' => 'bna', 'C03p19360' => 'bna', 'C03p74950' => 'bna', 'C03p91000' => 'bna', 'C04p63260' => 'bna', 'C05p27050' => 'bna', 'C06p08750' => 'bna', 'C06p11490' => 'bna', 'C07p02820' => 'bna', 'C07p17180' => 'bna', 'C07p29440' => 'bna', 'C07p63730' => 'bna', 'C09p39260' => 'bna', 'CAN.G1164.34' => 'can', 'CAN.G1164.39' => 'can', 'CAN.G1530.3' => 'can', 'CAN.G162.61' => 'can', 'CAN.G176.6' => 'can', 'CAN.G289.49' => 'can', 'CAN.G370.21' => 'can', 'CAN.G370.22' => 'can', 'CAN.G371.117' => 'can', 'CAN.G58.37' => 'can', 'CAN.G588.98' => 'can', 'CANSAT21G2266' => 'cansat', 'CANSAT25G2799' => 'cansat', 'CANSAT35G0862' => 'cansat', 'CANSAT35G1704' => 'cansat', 'CANSAT35G1760' => 'cansat', 'CANSAT56G3971' => 'cansat', 'CANSAT56G4116' => 'cansat', 'CANSAT80G1259' => 'cansat', 'CARHR027730' => 'chi', 'CARHR033880' => 'chi', 'CARHR043270' => 'chi', 'CARHR145330' => 'chi', 'CARHR145340' => 'chi', 'CARHR175570' => 'chi', 'CARHR181570' => 'chi', 'CARHR258470' => 'chi', 'CARHR260490' => 'chi', 'CARHR294220' => 'chi', 'Carub.0001s2668' => 'cru', 'Carub.0001s3257' => 'cru', 'Carub.0001s4220' => 'cru', 'Carub.0005s0179' => 'cru', 'Carub.0006s2807' => 'cru', 'Carub.0007s0039' => 'cru', 'Carub.0008s0169' => 'cru', 'Carub.0008s0636' => 'cru', 'Ca_00338_v3' => 'car', 'Ca_00542_v3' => 'car', 'Ca_01844_v3' => 'car', 'Ca_10611_v3' => 'car', 'Ca_13326_v3' => 'car', 'Ca_17944_v3' => 'car', 'Ca_18546_v3' => 'car', 'Ca_24219_v3' => 'car', 'Ca_29972_v3' => 'car', 'CBR_g3681' => 'cbr', 'CBR_g40021' => 'cbr', 'Cc01_g08140' => 'ccan', 'Cc02_g13410' => 'ccan', 'Cc02_g37480' => 'ccan', 'Cc05_g12030' => 'ccan', 'Cc09_g03370' => 'ccan', 'Cc09_g10300' => 'ccan', 'Cc10_g03530' => 'ccan', 'Cc10_g11380' => 'ccan', 'CDE01G0176' => 'cde', 'CDE02G0675' => 'cde', 'CDE02G0942' => 'cde', 'CDE02G1153' => 'cde', 'CDE02G4177' => 'cde', 'CDE04G2117' => 'cde', 'CDE04G2736' => 'cde', 'CDE08G1161' => 'cde', 'CDE09G1238' => 'cde', 'Cfa000467' => 'cfa', 'Cfa000947' => 'cfa', 'Cfa004969' => 'cfa', 'Cfa005284' => 'cfa', 'Cfa008993' => 'cfa', 'Cfa018187' => 'cfa', 'Cfa018454' => 'cfa', 'Cfa020585' => 'cfa', 'Ciclev10000424m.g' => 'ccl', 'Ciclev10003605m.g' => 'ccl', 'Ciclev10007828m.g' => 'ccl', 'Ciclev10014620m.g' => 'ccl', 'Ciclev10015169m.g' => 'ccl', 'Ciclev10018291m.g' => 'ccl', 'Ciclev10028256m.g' => 'ccl', 'Ciclev10033822m.g' => 'ccl', 'CiPaw.05G060300' => 'cil', 'CiPaw.05G085000' => 'cil', 'CiPaw.06G083700' => 'cil', 'CiPaw.06G120300' => 'cil', 'CiPaw.09G060500' => 'cil', 'CiPaw.09G123800' => 'cil', 'CiPaw.11G169700' => 'cil', 'CiPaw.12G118300' => 'cil', 'CiPaw.15G071000' => 'cil', 'CiPaw.15G081900' => 'cil', 'ClCG01G024610' => 'cla', 'ClCG03G006070' => 'cla', 'ClCG05G019250' => 'cla', 'ClCG09G009500' => 'cla', 'ClCG11G008200' => 'cla', 'ClCG11G018080' => 'cla', 'COL.COLO4_17373' => 'col', 'COL.COLO4_22994' => 'col', 'COL.COLO4_26389' => 'col', 'COL.COLO4_27170' => 'col', 'COL.COLO4_31074' => 'col', 'COL.COLO4_31465' => 'col', 'COL.COLO4_36438' => 'col', 'COL.COLO4_36439' => 'col', 'Cpa.g.c38781' => 'cpa', 'Cpa.g.sc128.12' => 'cpa', 'Cpa.g.sc166.7' => 'cpa', 'Cpa.g.sc166.8' => 'cpa', 'Cpa.g.sc20.111' => 'cpa', 'Cpa.g.sc27.31' => 'cpa', 'Cpa.g.sc64.36' => 'cpa', 'Cpa.g.sc64.37' => 'cpa', 'Cpa.g.sc66.49' => 'cpa', 'Cpa.g.sc80.64' => 'cpa', 'CsaV3_1G012320' => 'csa', 'CsaV3_2G008480' => 'csa', 'CsaV3_2G033450' => 'csa', 'CsaV3_3G044830' => 'csa', 'CsaV3_4G033710' => 'csa', 'CsaV3_6G051730' => 'csa', 'CsaV3_7G025350' => 'csa', 'CSS0001067' => 'camsi', 'CSS0005996' => 'camsi', 'CSS0006590' => 'camsi', 'CSS0009673' => 'camsi', 'CSS0010201' => 'camsi', 'CSS0010549' => 'camsi', 'CSS0011364' => 'camsi', 'CSS0014473' => 'camsi', 'CSS0014961' => 'camsi', 'CSS0020191' => 'camsi', 'CSS0021165' => 'camsi', 'CSS0022306' => 'camsi', 'CSS0030591' => 'camsi', 'CSS0030696' => 'camsi', 'CSS0032653' => 'camsi', 'CSS0037487' => 'camsi', 'CSS0041102' => 'camsi', 'CSS0041261' => 'camsi', 'CSS0046246' => 'camsi', 'CSS0049256' => 'camsi', 'DCAR_004075' => 'dca', 'DCAR_011538' => 'dca', 'DCAR_019553' => 'dca', 'DCAR_020952' => 'dca', 'DCAR_021739' => 'dca', 'DCAR_027407' => 'dca', 'DCAR_027913' => 'dca', 'DCAR_028066' => 'dca', 'Dinv05899' => 'din', 'Dinv07563' => 'din', 'Dinv08010' => 'din', 'Dinv14125' => 'din', 'Dinv20172' => 'din', 'Dinv30743' => 'din', 'Dinv31229' => 'din', 'Dinv34162' => 'din', 'Dinv36028' => 'din', 'Dinv39368' => 'din', 'Dinv40565' => 'din', 'Dinv41706' => 'din', 'Duzib052G0089' => 'dzi', 'Duzib116G0641' => 'dzi', 'Duzib132G0069' => 'dzi', 'Duzib132G1219' => 'dzi', 'Duzib147G0278' => 'dzi', 'Duzib160G0480' => 'dzi', 'Duzib170G0661' => 'dzi', 'Duzib177G0591' => 'dzi', 'Duzib187G1353' => 'dzi', 'Duzib192G0858' => 'dzi', 'Duzib192G0883' => 'dzi', 'Duzib213G0506' => 'dzi', 'Duzib235G0289' => 'dzi', 'Duzib251G0422' => 'dzi', 'ECA232G3898' => 'eca', 'ECA233G5950' => 'eca', 'ECA234G1699' => 'eca', 'ECA234G2421' => 'eca', 'ECA236G0426' => 'eca', 'ECA236G4331' => 'eca', 'ECA248G2573' => 'eca', 'EL10Ac1g00077' => 'bvu', 'EL10Ac1g01746' => 'bvu', 'EL10Ac2g03464' => 'bvu', 'EL10Ac4g08176' => 'bvu', 'EL10Ac7g17521' => 'bvu', 'EL10Ac8g20386' => 'bvu', 'EL10Ac9g21343' => 'bvu', 'EL10Ac9g22688' => 'bvu', 'Eucgr.B03434' => 'egr', 'Eucgr.D00618' => 'egr', 'Eucgr.E02395' => 'egr', 'Eucgr.F01129' => 'egr', 'Eucgr.F02622' => 'egr', 'Eucgr.F04207' => 'egr', 'FAN01G0570' => 'fan', 'FAN03G3351' => 'fan', 'FAN06G3702' => 'fan', 'FAN07G2149' => 'fan', 'FAN10G3758' => 'fan', 'FAN11G1170' => 'fan', 'FAN11G2050' => 'fan', 'FAN11G2724' => 'fan', 'FAN12G1700' => 'fan', 'FAN12G2028' => 'fan', 'FAN15G1160' => 'fan', 'FAN15G3063' => 'fan', 'FAN16G2540' => 'fan', 'FAN16G3077' => 'fan', 'FAN16G3624' => 'fan', 'FAN17G0221' => 'fan', 'FAN20G2492' => 'fan', 'FAN20G2905' => 'fan', 'FAN21G0548' => 'fan', 'FAN21G1300' => 'fan', 'FAN22G0077' => 'fan', 'FAN22G1315' => 'fan', 'FAN24G1280' => 'fan', 'FAN24G1445' => 'fan', 'FAN24G3527' => 'fan', 'FAN25G0464' => 'fan', 'FAN25G2885' => 'fan', 'FAN25G3270' => 'fan', 'FAN27G1101' => 'fan', 'FAN27G2846' => 'fan', 'FAN27G3524' => 'fan', 'FvH4_2g11770' => 'fve', 'FvH4_2g15630' => 'fve', 'FvH4_3g05570' => 'fve', 'FvH4_3g09110' => 'fve', 'FvH4_3g19940' => 'fve', 'FvH4_4g04821' => 'fve', 'FvH4_4g31480' => 'fve', 'FvH4_7g01740' => 'fve', 'Glyma.05G130400' => 'gma', 'Glyma.05G156400' => 'gma', 'Glyma.07G197000' => 'gma', 'Glyma.08G085151' => 'gma', 'Glyma.08G114500' => 'gma', 'Glyma.08G300400' => 'gma', 'Glyma.10G215800' => 'gma', 'Glyma.12G224400' => 'gma', 'Glyma.13G179300' => 'gma', 'Glyma.13G218151' => 'gma', 'Glyma.13G238800' => 'gma', 'Glyma.13G276900' => 'gma', 'Glyma.14G078200' => 'gma', 'Glyma.15G074500' => 'gma', 'Glyma.15G094100' => 'gma', 'Glyma.17G247200' => 'gma', 'Glyma.18G120100' => 'gma', 'Glyma.20G176000' => 'gma', 'Gohir.A01G063600' => 'ghi', 'Gohir.A01G170301' => 'ghi', 'Gohir.A02G060500' => 'ghi', 'Gohir.A05G133850' => 'ghi', 'Gohir.A05G161400' => 'ghi', 'Gohir.A06G012900' => 'ghi', 'Gohir.A06G035901' => 'ghi', 'Gohir.A06G127100' => 'ghi', 'Gohir.A06G210500' => 'ghi', 'Gohir.A08G008650' => 'ghi', 'Gohir.A09G072700' => 'ghi', 'Gohir.A09G088301' => 'ghi', 'Gohir.A10G040600' => 'ghi', 'Gohir.A12G036300' => 'ghi', 'Gohir.A12G143350' => 'ghi', 'Gohir.A12G165500' => 'ghi', 'Gohir.A13G145700' => 'ghi', 'Gohir.D01G050000' => 'ghi', 'Gohir.D01G051366' => 'ghi', 'Gohir.D01G161350' => 'ghi', 'Gohir.D02G065900' => 'ghi', 'Gohir.D05G164200' => 'ghi', 'Gohir.D05G355500' => 'ghi', 'Gohir.D06G010400' => 'ghi', 'Gohir.D06G111250' => 'ghi', 'Gohir.D06G132000' => 'ghi', 'Gohir.D06G210500' => 'ghi', 'Gohir.D07G165675' => 'ghi', 'Gohir.D08G062240' => 'ghi', 'Gohir.D08G086101' => 'ghi', 'Gohir.D08G138060' => 'ghi', 'Gohir.D09G072300' => 'ghi', 'Gohir.D10G041400' => 'ghi', 'Gohir.D11G191020' => 'ghi', 'Gohir.D11G212066' => 'ghi', 'Gohir.D12G036300' => 'ghi', 'Gohir.D12G168600' => 'ghi', 'Gohir.D13G150600' => 'ghi', 'Gorai.001G057300' => 'gra', 'Gorai.002G069900' => 'gra', 'Gorai.002G200000' => 'gra', 'Gorai.003G067600' => 'gra', 'Gorai.005G074800' => 'gra', 'Gorai.006G087300' => 'gra', 'Gorai.008G037500' => 'gra', 'Gorai.008G181400' => 'gra', 'Gorai.009G169400' => 'gra', 'Gorai.009G387900' => 'gra', 'Gorai.010G013300' => 'gra', 'Gorai.010G153800' => 'gra', 'Gorai.010G255800' => 'gra', 'Gorai.011G043700' => 'gra', 'Gorai.011G198900' => 'gra', 'Gorai.013G168400' => 'gra', 'GSVIVG01005212001' => 'vvi', 'GSVIVG01006163001' => 'vvi', 'GSVIVG01009625001' => 'vvi', 'GSVIVG01014338001' => 'vvi', 'GSVIVG01020005001' => 'vvi', 'GSVIVG01021450001' => 'vvi', 'GSVIVG01023975001' => 'vvi', 'GSVIVG01034490001' => 'vvi', 'HanXRQChr04g0112071' => 'han', 'HanXRQChr05g0131151' => 'han', 'HanXRQChr09g0262371' => 'han', 'HanXRQChr09g0268401' => 'han', 'HanXRQChr10g0279241' => 'han', 'HanXRQChr10g0297961' => 'han', 'HanXRQChr11g0326231' => 'han', 'HanXRQChr11g0328471' => 'han', 'HanXRQChr16g0507941' => 'han', 'HanXRQChr17g0560211' => 'han', 'Haze_02108' => 'cav', 'Haze_02428' => 'cav', 'Haze_05593' => 'cav', 'Haze_06448' => 'cav', 'Haze_09427' => 'cav', 'Haze_12022' => 'cav', 'Haze_17612' => 'cav', 'Haze_17928' => 'cav', 'Hma1.2p1_0032F.1_g019250' => 'hma', 'Hma1.2p1_0163F.1_g072690' => 'hma', 'Hma1.2p1_0265F.1_g106710' => 'hma', 'Hma1.2p1_0286F.1_g113970' => 'hma', 'Hma1.2p1_0363F.1_g136640' => 'hma', 'Hma1.2p1_0584F.1_g183470' => 'hma', 'Hma1.2p1_0885F.1_g232570' => 'hma', 'HPP92_006022' => 'vpl', 'HPP92_007320' => 'vpl', 'HPP92_011521' => 'vpl', 'HPP92_019387' => 'vpl', 'HPP92_024038' => 'vpl', 'Hund05891' => 'sun', 'Hund06450' => 'sun', 'Hund12053' => 'sun', 'Hund16800' => 'sun', 'Hund21222' => 'sun', 'Hund22896' => 'sun', 'Hund23746' => 'sun', 'Hund27083' => 'sun', 'Lalb_Chr02g0141831' => 'lal', 'Lalb_Chr02g0141841' => 'lal', 'Lalb_Chr05g0220411' => 'lal', 'Lalb_Chr06g0162081' => 'lal', 'Lalb_Chr09g0327651' => 'lal', 'Lalb_Chr13g0295051' => 'lal', 'Lalb_Chr15g0086801' => 'lal', 'Lalb_Chr16g0383781' => 'lal', 'Lalb_Chr16g0383791' => 'lal', 'Lalb_Chr18g0055441' => 'lal', 'Lalb_Chr18g0059611' => 'lal', 'Lalb_Chr20g0109661' => 'lal', 'Lalb_Chr20g0109831' => 'lal', 'Lalb_Chr20g0121871' => 'lal', 'Lalb_Chr22g0355361' => 'lal', 'Lalb_Chr25g0286371' => 'lal', 'Lj1A1187G43' => 'lonja', 'Lj1A1205T50' => 'lonja', 'Lj1A800G33' => 'lonja', 'Lj1C1187T7' => 'lonja', 'Lj1C843T11' => 'lonja', 'Lj1g0010940' => 'lja', 'Lj2A288T69' => 'lonja', 'Lj3g0024276' => 'lja', 'Lj4A47T76' => 'lonja', 'Lj4g0005805' => 'lja', 'Lj4g0006097' => 'lja', 'Lj4g0008528' => 'lja', 'Lj4g0024907' => 'lja', 'Lj5g0012472' => 'lja', 'Lj5g0018648' => 'lja', 'Lj6C789G1' => 'lonja', 'Lj6g0004000' => 'lja', 'Lj7A292G67' => 'lonja', 'Lj7A292T64' => 'lonja', 'Lj9A400T58' => 'lonja', 'Lsat_1_v5_gn_1_126181' => 'lsa', 'Lsat_1_v5_gn_4_123041' => 'lsa', 'Lsat_1_v5_gn_4_133620' => 'lsa', 'Lsat_1_v5_gn_4_53221' => 'lsa', 'Lsat_1_v5_gn_4_71961' => 'lsa', 'Lsat_1_v5_gn_7_105241' => 'lsa', 'Lsat_1_v5_gn_7_21361' => 'lsa', 'Lsat_1_v5_gn_7_28860' => 'lsa', 'Lsat_1_v5_gn_7_31260' => 'lsa', 'Lsat_1_v5_gn_8_52801' => 'lsa', 'Manes.02G191400' => 'mes', 'Manes.03G110100' => 'mes', 'Manes.04G071100' => 'mes', 'Manes.05G100500' => 'mes', 'Manes.05G164700' => 'mes', 'Manes.15G087000' => 'mes', 'Manes.15G121500' => 'mes', 'Manes.16G028300' => 'mes', 'Manes.17G046100' => 'mes', 'Manes.17G069800' => 'mes', 'Manes.18G100500' => 'mes', 'Mapoly0002s0109' => 'mpo', 'Mapoly0024s0007' => 'mpo', 'Mapoly0089s0032' => 'mpo', 'MBI04_g42241_MAGBIO' => 'mbi', 'MBI05_g11988_MAGBIO' => 'mbi', 'MBI05_g35452_MAGBIO' => 'mbi', 'MBI07_g30179_MAGBIO' => 'mbi', 'MBI07_g35859_MAGBIO' => 'mbi', 'MBI07_g35860_MAGBIO' => 'mbi', 'MBI07_g37166_MAGBIO' => 'mbi', 'MBI08_g18172_MAGBIO' => 'mbi', 'MBI09_g08441_MAGBIO' => 'mbi', 'MBI13_g01676_MAGBIO' => 'mbi', 'MBI14_g42955_MAGBIO' => 'mbi', 'MBI16_g13161_MAGBIO' => 'mbi', 'MBI17_g27204_MAGBIO' => 'mbi', 'MBI19_g21595_MAGBIO' => 'mbi', 'MD00G1148400' => 'mdo', 'MD02G1301200' => 'mdo', 'MD03G1227800' => 'mdo', 'MD05G1041100' => 'mdo', 'MD05G1124800' => 'mdo', 'MD05G1284000' => 'mdo', 'MD05G1338800' => 'mdo', 'MD05G1338900' => 'mdo', 'MD07G1022800' => 'mdo', 'MD10G1047500' => 'mdo', 'MD10G1127500' => 'mdo', 'MD10G1262300' => 'mdo', 'MD10G1293800' => 'mdo', 'MD16G1074300' => 'mdo', 'Medtr1g021670' => 'mtr', 'Medtr1g096320' => 'mtr', 'Medtr2g013690' => 'mtr', 'Medtr2g019450' => 'mtr', 'Medtr2g085170' => 'mtr', 'Medtr4g088785' => 'mtr', 'Medtr8g055930' => 'mtr', 'Medtr8g085850' => 'mtr', 'MELO3C002605.2' => 'cme', 'MELO3C003891.2' => 'cme', 'MELO3C004012.2' => 'cme', 'MELO3C007134.2' => 'cme', 'MELO3C008118.2' => 'cme', 'MELO3C016700.2' => 'cme', 'MELO3C024127.2' => 'cme', 'MELO3C033361.2' => 'cme', 'MELO3C033362.2' => 'cme', 'Migut.C00430' => 'egut', 'Migut.C01246' => 'egut', 'Migut.E00101' => 'egut', 'Migut.H01486' => 'egut', 'Migut.H01939' => 'egut', 'Migut.K00360' => 'egut', 'Migut.M00910' => 'egut', 'Migut.M01139' => 'egut', 'Migut.N02677' => 'egut', 'MSTRG.13252' => 'ama', 'MSTRG.14701' => 'ama', 'MSTRG.1521' => 'ama', 'MSTRG.15884' => 'ama', 'MSTRG.16242' => 'ama', 'MSTRG.22285' => 'ama', 'MSTRG.22444' => 'ama', 'MSTRG.2349' => 'ama', 'MSTRG.26308' => 'ama', 'MSTRG.28296' => 'ama', 'MSTRG.9895' => 'ama', 'Nitab4.5_0000110g0060' => 'nta', 'Nitab4.5_0000420g0130' => 'nta', 'Nitab4.5_0000422g0030' => 'nta', 'Nitab4.5_0000560g0180' => 'nta', 'Nitab4.5_0000703g0100' => 'nta', 'Nitab4.5_0000786g0200' => 'nta', 'Nitab4.5_0001336g0020' => 'nta', 'Nitab4.5_0001796g0030' => 'nta', 'Nitab4.5_0003348g0060' => 'nta', 'Nitab4.5_0003698g0040' => 'nta', 'Nitab4.5_0003942g0090' => 'nta', 'Nitab4.5_0004775g0070' => 'nta', 'Nitab4.5_0004864g0030' => 'nta', 'Nitab4.5_0005615g0020' => 'nta', 'Nitab4.5_0009288g0030' => 'nta', 'Nitab4.5_0009341g0010' => 'nta', 'Nitab4.5_0009535g0010' => 'nta', 'Nn1g03995' => 'nnu', 'Nn1g04100' => 'nnu', 'Nn1g06530' => 'nnu', 'Nn3g16404' => 'nnu', 'Nn3g17212' => 'nnu', 'Nn3g20776' => 'nnu', 'Nn3g21923' => 'nnu', 'Nn5g27737' => 'nnu', 'Nn5g29461' => 'nnu', 'Nn7g38355' => 'nnu', 'Nn8g39873' => 'nnu', 'Oeu000548.2' => 'oeu', 'Oeu004672.1' => 'oeu', 'Oeu015605.2' => 'oeu', 'Oeu016092.1' => 'oeu', 'Oeu017879.3' => 'oeu', 'Oeu024910.1' => 'oeu', 'Oeu028965.1' => 'oeu', 'Oeu031269.1' => 'oeu', 'Oeu031270.1' => 'oeu', 'Oeu032535.1' => 'oeu', 'Oeu034151.1' => 'oeu', 'Oeu034152.1' => 'oeu', 'Oeu034588.2' => 'oeu', 'Oeu050846.1' => 'oeu', 'Oeu050849.2' => 'oeu', 'Oeu051063.2' => 'oeu', 'Oeu052368.1' => 'oeu', 'Oeu052370.1' => 'oeu', 'Os01g0210400' => 'osa', 'Os01g0304300' => 'osa', 'Os01g0749100' => 'osa', 'Os02g0745800' => 'osa', 'Os03g0769050' => 'osa', 'Os05g0531500' => 'osa', 'Os06g0724300' => 'osa', 'Os11g0198100' => 'osa', 'Peaxi162Scf00069g01425' => 'pax', 'Peaxi162Scf00280g00811' => 'pax', 'Peaxi162Scf00310g00615' => 'pax', 'Peaxi162Scf00362g00542' => 'pax', 'Peaxi162Scf00461g00310' => 'pax', 'Peaxi162Scf00530g00118' => 'pax', 'Peaxi162Scf00541g00057' => 'pax', 'Peaxi162Scf00661g00017' => 'pax', 'Peaxi162Scf00926g00027' => 'pax', 'Peaxi162Scf01064g00263' => 'pax', 'Peaxi162Scf01211g00135' => 'pax', 'PGR004G2336' => 'pgr', 'PGR042G0327' => 'pgr', 'PGR042G1957' => 'pgr', 'PGR042G2003' => 'pgr', 'PGR042G3929' => 'pgr', 'PGR083G1137' => 'pgr', 'PGR083G1364' => 'pgr', 'PGSC0003DMG400003381' => 'stu', 'PGSC0003DMG400003417' => 'stu', 'PGSC0003DMG400008981' => 'stu', 'PGSC0003DMG400012417' => 'stu', 'PGSC0003DMG400012823' => 'stu', 'PGSC0003DMG400016885' => 'stu', 'PGSC0003DMG400022812' => 'stu', 'PGSC0003DMG400029726' => 'stu', 'PGSC0003DMG401009243' => 'stu', 'PGSC0003DMG401031505' => 'stu', 'PGSC0003DMG402031505' => 'stu', 'Phvul.001G017600' => 'pvu', 'Phvul.002G193500' => 'pvu', 'Phvul.002G228900' => 'pvu', 'Phvul.002G236800' => 'pvu', 'Phvul.003G049500' => 'pvu', 'Phvul.005G072000' => 'pvu', 'Phvul.006G164800' => 'pvu', 'Phvul.006G185100' => 'pvu', 'Phvul.007G090000' => 'pvu', 'Potri.001G399800' => 'ptr', 'Potri.002G149900' => 'ptr', 'Potri.004G044100' => 'ptr', 'Potri.004G177600' => 'ptr', 'Potri.009G138000' => 'ptr', 'Potri.010G094000' => 'ptr', 'Potri.011G053000' => 'ptr', 'Potri.011G119300' => 'ptr', 'Potri.013G113700' => 'ptr', 'Potri.018G107800' => 'ptr', 'Potri.019G084100' => 'ptr', 'Pp3c14_23720' => 'ppa', 'Pp3c16_6340' => 'ppa', 'Pp3c23_13420' => 'ppa', 'Pp3c24_2740' => 'ppa', 'Pp3c25_860' => 'ppa', 'Pp3c8_21750' => 'ppa', 'Prupe.1G273000' => 'ppe', 'Prupe.1G273700' => 'ppe', 'Prupe.1G274100' => 'ppe', 'Prupe.2G023300' => 'ppe', 'Prupe.4G048000' => 'ppe', 'Prupe.4G080400' => 'ppe', 'Prupe.4G181200' => 'ppe', 'Prupe.8G056900' => 'ppe', 'Prupe.8G168700' => 'ppe', 'Psat1g189080' => 'psa', 'Psat1g204760' => 'psa', 'Psat4g175560' => 'psa', 'Psat4g177720' => 'psa', 'Psat5g244240' => 'psa', 'Psat6g010720' => 'psa', 'Psat6g187200' => 'psa', 'Psat7g072040' => 'psa', 'PSO017G3501' => 'pso', 'PSO063G2148' => 'pso', 'PSO063G5608' => 'pso', 'PSO210G6392' => 'pso', 'PSO541G2319' => 'pso', 'PSO541G2836' => 'pso', 'PSO541G4012' => 'pso', 'PSO541G6253' => 'pso', 'PSO675G0580' => 'pso', 'PSO675G0856' => 'pso', 'PSO675G5635' => 'pso', 'PSO675G9157' => 'pso', 'PSO832G1660' => 'pso', 'PSO832G1969' => 'pso', 'QL02p007186' => 'qlo', 'QL02p033904' => 'qlo', 'QL03p064391' => 'qlo', 'QL05p040593' => 'qlo', 'QL05p058242' => 'qlo', 'QL08p021825' => 'qlo', 'QL11p004981' => 'qlo', 'RcHm_v2.0_Chr1g0318301' => 'rch', 'RcHm_v2.0_Chr4g0418501' => 'rch', 'RcHm_v2.0_Chr4g0439971' => 'rch', 'RcHm_v2.0_Chr5g0008541' => 'rch', 'RcHm_v2.0_Chr5g0014101' => 'rch', 'RcHm_v2.0_Chr5g0014131' => 'rch', 'RcHm_v2.0_Chr5g0033621' => 'rch', 'RcHm_v2.0_Chr6g0272041' => 'rch', 'RcHm_v2.0_Chr6g0278831' => 'rch', 'Rhsim02G0130400' => 'rsi', 'Rhsim02G0171100' => 'rsi', 'Rhsim05G0053000' => 'rsi', 'Rhsim05G0053100' => 'rsi', 'Rhsim06G0096500' => 'rsi', 'Rhsim06G0096600' => 'rsi', 'Rhsim06G0199100' => 'rsi', 'Rhsim12G0062300' => 'rsi', 'Rhsim12G0062800' => 'rsi', 'Sabra02G0118600' => 'sbr', 'Sabra04G0027300' => 'sbr', 'Sabra04G0119500' => 'sbr', 'Sabra08G0112500' => 'sbr', 'Sabra11G0036800' => 'sbr', 'Sabra11G0103800' => 'sbr', 'Sabra13G0096300' => 'sbr', 'Sabra16G0262300' => 'sbr', 'Sabra18G0091700' => 'sbr', 'Sabra19G0095400' => 'sbr', 'SalBow6G3080' => 'sbo', 'SalBow7G1157' => 'sbo', 'SalBow7G2123' => 'sbo', 'SalBow7G2285' => 'sbo', 'SalBow7G3537' => 'sbo', 'SalBow8G2947' => 'sbo', 'SalBow8G4463' => 'sbo', 'SalBow8G5466' => 'sbo', 'Sc01g0001750' => 'sci', 'Sc02g0006640' => 'sci', 'Sc02g0006670' => 'sci', 'Sc04g0008220' => 'sci', 'Sc05g0006190' => 'sci', 'Sc08g0002760' => 'sci', 'Sc17g0006170' => 'sci', 'Sc22g0002050' => 'sci', 'Sc23g0001190' => 'sci', 'Sc24g0000980' => 'sci', 'Sed0006245' => 'sed', 'Sed0007543' => 'sed', 'Sed0009411' => 'sed', 'Sed0010765' => 'sed', 'Sed0012944' => 'sed', 'Sed0014682' => 'sed', 'Sed0016174' => 'sed', 'Sed0016796' => 'sed', 'Sed0020317' => 'sed', 'Sed0021467' => 'sed', 'SEGI_01316' => 'sgi', 'SEGI_03374' => 'sgi', 'SEGI_16265' => 'sgi', 'SEGI_18569' => 'sgi', 'SEGI_20351' => 'sgi', 'SEGI_26395' => 'sgi', 'SEGI_29469' => 'sgi', 'SEGI_34771' => 'sgi', 'SEGI_36769' => 'sgi', 'SEGI_37139' => 'sgi', 'SGA_v2.0_scaffold100G29687' => 'sas', 'SGA_v2.0_scaffold118G32472' => 'sas', 'SGA_v2.0_scaffold14G07051' => 'sas', 'SGA_v2.0_scaffold183G39845' => 'sas', 'SGA_v2.0_scaffold1G00174' => 'sas', 'SGA_v2.0_scaffold22G09714' => 'sas', 'SGA_v2.0_scaffold333G48992' => 'sas', 'SGA_v2.0_scaffold46G17491' => 'sas', 'SGA_v2.0_scaffold49G18294' => 'sas', 'SGA_v2.0_scaffold63G21658' => 'sas', 'SHI01741' => 'shi', 'SHI05771' => 'shi', 'SHI18077' => 'shi', 'SHI20525' => 'shi', 'SHI20527' => 'shi', 'SHI20528' => 'shi', 'SMO172G0185' => 'smo', 'SMO198G0020' => 'smo', 'SMO351G0006' => 'smo', 'SMO356G0118' => 'smo', 'SMO358G0296' => 'smo', 'SMO367G0079' => 'smo', 'SMO367G1277' => 'smo', 'Solyc01g014220.3' => 'sly', 'Solyc01g111770.2' => 'sly', 'Solyc02g078180.3' => 'sly', 'Solyc03g006430.3' => 'sly', 'Solyc03g006456.1' => 'sly', 'Solyc03g079860.2' => 'sly', 'Solyc04g079770.3' => 'sly', 'Solyc05g007430.4' => 'sly', 'Solyc07g063150.3' => 'sly', 'Solyc08g016620.3' => 'sly', 'Solyc09g057590.3' => 'sly', 'Solyc09g057600.1' => 'sly', 'Solyc10g009050.3' => 'sly', 'Solyc11g017420.2' => 'sly', 'Sopen01g053810' => 'spe', 'Sopen02g023040' => 'spe', 'Sopen03g002440' => 'spe', 'Sopen04g033350' => 'spe', 'Sopen05g003310' => 'spe', 'Sopen07g004050' => 'spe', 'Sopen07g031340' => 'spe', 'Sopen08g006990' => 'spe', 'Sopen10g004830' => 'spe', 'Sopen11g009370' => 'spe', 'Sp1g24450' => 'spa', 'Sp1g29670' => 'spa', 'Sp1g39600' => 'spa', 'Sp2g11080' => 'spa', 'Sp2g13970' => 'spa', 'Sp4g16130' => 'spa', 'Sp6g13080' => 'spa', 'Sp7g37270' => 'spa', 'TAR371G0065' => 'tar', 'TAR376G0340' => 'tar', 'TAR376G0435' => 'tar', 'TAR381G0002' => 'tar', 'TAR381G1236' => 'tar', 'TAR624G0055' => 'tar', 'TAR624G0324' => 'tar', 'TAR624G0696' => 'tar', 'TAR624G0906' => 'tar', 'TAR625G0107' => 'tar', 'TAR626G0015' => 'tar', 'TAR626G1356' => 'tar', 'TAR627G0888' => 'tar', 'TAR628G0399' => 'tar', 'TAR628G1327' => 'tar', 'TAR629G2831' => 'tar', 'TAR629G2874' => 'tar', 'TAR633G1432' => 'tar', 'TAR633G2771' => 'tar', 'THA.LOC104803394' => 'tha', 'THA.LOC104805153' => 'tha', 'THA.LOC104806784' => 'tha', 'THA.LOC104810473' => 'tha', 'THA.LOC104813100' => 'tha', 'THA.LOC104814215' => 'tha', 'THA.LOC104815554' => 'tha', 'THA.LOC104820544' => 'tha', 'THA.LOC104824754' => 'tha', 'THA.LOC104827717' => 'tha', 'Thecc.02G031400' => 'tca', 'Thecc.02G055900' => 'tca', 'Thecc.02G350800' => 'tca', 'Thecc.06G150900' => 'tca', 'Thecc.06G186600' => 'tca', 'Thecc.07G089600' => 'tca', 'Thecc.08G020400' => 'tca', 'Thecc.08G182100' => 'tca', 'Thhalv10000873m.g' => 'esa', 'Thhalv10004185m.g' => 'esa', 'Thhalv10006981m.g' => 'esa', 'Thhalv10007204m.g' => 'esa', 'Thhalv10011374m.g' => 'esa', 'Thhalv10013482m.g' => 'esa', 'Thhalv10017801m.g' => 'esa', 'Thhalv10024983m.g' => 'esa', 'TPR.G12072' => 'tpr', 'TPR.G15769' => 'tpr', 'TPR.G16504' => 'tpr', 'TPR.G16506' => 'tpr', 'TPR.G24345' => 'tpr', 'TPR.G26666' => 'tpr', 'TPR.G27320' => 'tpr', 'TPR.G31819' => 'tpr', 'TPR.G38879' => 'tpr', 'TPR.G39015' => 'tpr', 'TPR.G8819' => 'tpr', 'TWI09G0924' => 'twi', 'TWI12G0811' => 'twi', 'TWI12G1294' => 'twi', 'TWI31G0150' => 'twi', 'TWI36G1262' => 'twi', 'TWI38G1287' => 'twi', 'TWI38G1633' => 'twi', 'TWI38G1982' => 'twi', 'TWI39G0116' => 'twi', 'TWI60G1011' => 'twi', 'TWI63G0171' => 'twi', 'TWI73G0839' => 'twi', 'TWI79G1511' => 'twi', 'unitig_0.g915' => 'ugi', 'unitig_0.g916' => 'ugi', 'unitig_21.g20219' => 'ugi', 'unitig_21.g20416' => 'ugi', 'unitig_578.g16132' => 'ugi', 'unitig_578.g16718' => 'ugi', 'unitig_62.g23481' => 'ugi', 'unitig_744.g24535' => 'ugi', 'unitig_749.g13525' => 'ugi', 'vmacro01248' => 'vma', 'vmacro02290' => 'vma', 'vmacro10946' => 'vma', 'vmacro11865' => 'vma', 'vmacro12493' => 'vma', 'vmacro17322' => 'vma', 'vmacro21599' => 'vma', 'vmacro23041' => 'vma', 'VMungo0251G0004' => 'vmu', 'VMungo0251G2639' => 'vmu', 'VMungo0251G2967' => 'vmu', 'VMungo0540G0864' => 'vmu', 'VMungo0540G1569' => 'vmu', 'VMungo0647G0317' => 'vmu', 'VMungo0720G1373' => 'vmu', 'VMungo0720G1508' => 'vmu', 'VMungo1080G0485' => 'vmu', 'VMungo1215G3177' => 'vmu', 'Zm00001eb112600' => 'zma', 'Zm00001eb120220' => 'zma', 'Zm00001eb153240' => 'zma', 'Zm00001eb168880' => 'zma', 'Zm00001eb213920' => 'zma', 'Zm00001eb228280' => 'zma', 'Zm00001eb254580' => 'zma', 'Zm00001eb272180' => 'zma', 'Zm00001eb293190' => 'zma', 'Zm00001eb322930' => 'zma', 'Zm00001eb353360' => 'zma', 'Zm00001eb353390' => 'zma', 'Zm00001eb353430' => 'zma', 'Zm00001eb353440' => 'zma', 'Zm00001eb353780' => 'zma' ), 'gf_id' => 'HOM05D000499', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000499' ), 'data_identifier' => 'HOM05D000499', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000499', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1066', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p29780' => 'bna', 'A02p33180' => 'bna', 'A03p16470' => 'bna', 'A03p66010' => 'bna', 'A04p25970' => 'bna', 'A06p01270' => 'bna', 'A06p46080' => 'bna', 'A07p11400' => 'bna', 'A08p01840' => 'bna', 'A08p08230' => 'bna', 'A08p25740' => 'bna', 'A09p32070' => 'bna', 'A09p37830' => 'bna', 'A09p42840' => 'bna', 'A09p42850' => 'bna', 'Aa31LG10G2060' => 'aar', 'Aa31LG2G7410' => 'aar', 'Aa31LG6G10200' => 'aar', 'Aa31LG6G16680' => 'aar', 'Aa31LG6G8470' => 'aar', 'Aa31LG9G12730' => 'aar', 'Aa31LG9G13680' => 'aar', 'Aa31LG9G14920' => 'aar', 'Aa31LG9G6650' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4977' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5467' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3254' => 'aag', 'Actinidia02578' => 'ach', 'Actinidia07693' => 'ach', 'Actinidia08413' => 'ach', 'Actinidia08414' => 'ach', 'Actinidia15289' => 'ach', 'Actinidia19871' => 'ach', 'Actinidia21475' => 'ach', 'Actinidia22576' => 'ach', 'Actinidia28327' => 'ach', 'Actinidia32491' => 'ach', 'Actinidia39463' => 'ach', 'Actinidia39571' => 'ach', 'Ah.01g013750' => 'amhyb', 'Ah.01g023210' => 'amhyb', 'Ah.04g164850' => 'amhyb', 'Ah.05g178060' => 'amhyb', 'Ah.07g204270' => 'amhyb', 'Ah.07g208480' => 'amhyb', 'Ah.09g237410' => 'amhyb', 'Ah.14g089460' => 'amhyb', 'AL1G41790' => 'aly', 'AL1G49050' => 'aly', 'AL1G53810' => 'aly', 'AL1G61400' => 'aly', 'AL4G18580' => 'aly', 'AL5G12510' => 'aly', 'AL5G12540' => 'aly', 'AL6G43230' => 'aly', 'AL7G10370' => 'aly', 'AL7G19250' => 'aly', 'AL8G12240' => 'aly', 'AL8G18540' => 'aly', 'Aqoxy1G02409' => 'aox', 'Aqoxy2G03993' => 'aox', 'Aqoxy3G03357' => 'aox', 'Aqoxy4G00785' => 'aox', 'Aqoxy5G02598' => 'aox', 'Aqoxy6G00132' => 'aox', 'Aqoxy7G01776' => 'aox', 'Aqoxy7G02316' => 'aox', 'Aqoxy7G03973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.12AFKW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B8730' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27IQR1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3F75VG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3RE0GA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41TCQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.527VTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FIR39' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5W8UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DA38EV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ63HS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H1I32C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HC27T5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4M8AP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7N3CZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9UVDZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LS1NQA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT1D4B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SKC4TM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCFV76' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF9Q1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQWD9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1ZM88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WE07RT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YCK7VH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJE6Q6' => 'arhy', 'AT1G28240' => 'ath', 'AT1G34550' => 'ath', 'AT1G53040' => 'ath', 'AT2G02910' => 'ath', 'AT4G09630' => 'ath', 'AT4G38500' => 'ath', 'AT5G42660' => 'ath', 'AT5G46220' => 'ath', 'ATR0152G026' => 'atr', 'ATR0564G343' => 'atr', 'ATR0706G151' => 'atr', 'ATR0733G207' => 'atr', 'ATR0751G234' => 'atr', 'ATR0807G048' => 'atr', 'ATR1091G084' => 'atr', 'Atru.chr10.1229' => 'acertr', 'Atru.chr10.1230' => 'acertr', 'Atru.chr10.1874' => 'acertr', 'Atru.chr11.1808' => 'acertr', 'Atru.chr13.1795' => 'acertr', 'Atru.chr13.570' => 'acertr', 'Atru.chr2.2608' => 'acertr', 'Atru.chr2.2609' => 'acertr', 'Atru.chr5.3428' => 'acertr', 'Atru.chr8.1171' => 'acertr', 'AUR62004651' => 'cqu', 'AUR62008675' => 'cqu', 'AUR62010014' => 'cqu', 'AUR62013004' => 'cqu', 'AUR62014825' => 'cqu', 'AUR62015015' => 'cqu', 'AUR62015151' => 'cqu', 'AUR62017020' => 'cqu', 'AUR62019422' => 'cqu', 'AUR62023570' => 'cqu', 'AUR62025571' => 'cqu', 'AUR62029098' => 'cqu', 'AUR62033863' => 'cqu', 'AUR62034296' => 'cqu', 'AUR62040075' => 'cqu', 'BcaB02g07334' => 'bca', 'BcaB02g10575' => 'bca', 'BcaB03g12119' => 'bca', 'BcaB03g12120' => 'bca', 'BcaB03g13945' => 'bca', 'BcaB04g17123' => 'bca', 'BcaB04g17867' => 'bca', 'BcaB04g19839' => 'bca', 'BcaB07g30317' => 'bca', 'BcaB07g32432' => 'bca', 'BcaB07g33362' => 'bca', 'BcaB08g36611' => 'bca', 'BcaC01g00028' => 'bca', 'BcaC01g01356' => 'bca', 'BcaC01g02034' => 'bca', 'BcaC01g06051' => 'bca', 'BcaC03g16839' => 'bca', 'BcaC03g17176' => 'bca', 'BcaC05g26829' => 'bca', 'BcaC06g31490' => 'bca', 'BcaC06g35344' => 'bca', 'BcaC06g36570' => 'bca', 'BcaC07g37537' => 'bca', 'BcaC08g43491' => 'bca', 'BcaC08g43773' => 'bca', 'BcaNung00234' => 'bca', 'BcaNung01982' => 'bca', 'BcaNung03707' => 'bca', 'BcaNung06454' => 'bca', 'BolC2t10762H' => 'bol', 'BolC2t11191H' => 'bol', 'BolC3t14322H' => 'bol', 'BolC3t19747H' => 'bol', 'BolC3t21425H' => 'bol', 'BolC4t27800H' => 'bol', 'BolC5t31423H' => 'bol', 'BolC6t35951H' => 'bol', 'BolC6t36282H' => 'bol', 'BolC7t40678H' => 'bol', 'BolC7t40679H' => 'bol', 'BolC7t42222H' => 'bol', 'BolC7t43492H' => 'bol', 'BolC7t46785H' => 'bol', 'BolC8t47853H' => 'bol', 'BolC9t56805H' => 'bol', 'BraA02t08000Z' => 'bra', 'BraA02t08341Z' => 'bra', 'BraA03t10936Z' => 'bra', 'BraA03t15657Z' => 'bra', 'BraA04t18100Z' => 'bra', 'BraA05t20523Z' => 'bra', 'BraA06t23353Z' => 'bra', 'BraA06t27473Z' => 'bra', 'BraA06t27769Z' => 'bra', 'BraA07t28928Z' => 'bra', 'BraA08t32236Z' => 'bra', 'BraA08t32841Z' => 'bra', 'BraA08t34524Z' => 'bra', 'BraA09t38742Z' => 'bra', 'BraA09t39295Z' => 'bra', 'C02p47180' => 'bna', 'C02p50990' => 'bna', 'C03p19360' => 'bna', 'C03p74950' => 'bna', 'C03p91000' => 'bna', 'C04p63260' => 'bna', 'C05p27050' => 'bna', 'C06p08750' => 'bna', 'C06p11490' => 'bna', 'C07p02820' => 'bna', 'C07p17180' => 'bna', 'C07p29440' => 'bna', 'C07p63730' => 'bna', 'C09p39260' => 'bna', 'CAN.G1164.34' => 'can', 'CAN.G1164.39' => 'can', 'CAN.G1530.3' => 'can', 'CAN.G162.61' => 'can', 'CAN.G176.6' => 'can', 'CAN.G289.49' => 'can', 'CAN.G370.21' => 'can', 'CAN.G370.22' => 'can', 'CAN.G371.117' => 'can', 'CAN.G58.37' => 'can', 'CAN.G588.98' => 'can', 'CANSAT21G2266' => 'cansat', 'CANSAT25G2799' => 'cansat', 'CANSAT35G0862' => 'cansat', 'CANSAT35G1704' => 'cansat', 'CANSAT35G1760' => 'cansat', 'CANSAT56G3971' => 'cansat', 'CANSAT56G4116' => 'cansat', 'CANSAT80G1259' => 'cansat', 'CARHR027730' => 'chi', 'CARHR033880' => 'chi', 'CARHR043270' => 'chi', 'CARHR145330' => 'chi', 'CARHR145340' => 'chi', 'CARHR175570' => 'chi', 'CARHR181570' => 'chi', 'CARHR258470' => 'chi', 'CARHR260490' => 'chi', 'CARHR294220' => 'chi', 'Carub.0001s2668' => 'cru', 'Carub.0001s3257' => 'cru', 'Carub.0001s4220' => 'cru', 'Carub.0005s0179' => 'cru', 'Carub.0006s2807' => 'cru', 'Carub.0007s0039' => 'cru', 'Carub.0008s0169' => 'cru', 'Carub.0008s0636' => 'cru', 'Ca_00338_v3' => 'car', 'Ca_00542_v3' => 'car', 'Ca_01844_v3' => 'car', 'Ca_10611_v3' => 'car', 'Ca_13326_v3' => 'car', 'Ca_17944_v3' => 'car', 'Ca_18546_v3' => 'car', 'Ca_24219_v3' => 'car', 'Ca_29972_v3' => 'car', 'CBR_g3681' => 'cbr', 'CBR_g40021' => 'cbr', 'Cc01_g08140' => 'ccan', 'Cc02_g13410' => 'ccan', 'Cc02_g37480' => 'ccan', 'Cc05_g12030' => 'ccan', 'Cc09_g03370' => 'ccan', 'Cc09_g10300' => 'ccan', 'Cc10_g03530' => 'ccan', 'Cc10_g11380' => 'ccan', 'CDE01G0176' => 'cde', 'CDE02G0675' => 'cde', 'CDE02G0942' => 'cde', 'CDE02G1153' => 'cde', 'CDE02G4177' => 'cde', 'CDE04G2117' => 'cde', 'CDE04G2736' => 'cde', 'CDE08G1161' => 'cde', 'CDE09G1238' => 'cde', 'Cfa000467' => 'cfa', 'Cfa000947' => 'cfa', 'Cfa004969' => 'cfa', 'Cfa005284' => 'cfa', 'Cfa008993' => 'cfa', 'Cfa018187' => 'cfa', 'Cfa018454' => 'cfa', 'Cfa020585' => 'cfa', 'Ciclev10000424m.g' => 'ccl', 'Ciclev10003605m.g' => 'ccl', 'Ciclev10007828m.g' => 'ccl', 'Ciclev10014620m.g' => 'ccl', 'Ciclev10015169m.g' => 'ccl', 'Ciclev10018291m.g' => 'ccl', 'Ciclev10028256m.g' => 'ccl', 'Ciclev10033822m.g' => 'ccl', 'CiPaw.05G060300' => 'cil', 'CiPaw.05G085000' => 'cil', 'CiPaw.06G083700' => 'cil', 'CiPaw.06G120300' => 'cil', 'CiPaw.09G060500' => 'cil', 'CiPaw.09G123800' => 'cil', 'CiPaw.11G169700' => 'cil', 'CiPaw.12G118300' => 'cil', 'CiPaw.15G071000' => 'cil', 'CiPaw.15G081900' => 'cil', 'ClCG01G024610' => 'cla', 'ClCG03G006070' => 'cla', 'ClCG05G019250' => 'cla', 'ClCG09G009500' => 'cla', 'ClCG11G008200' => 'cla', 'ClCG11G018080' => 'cla', 'COL.COLO4_17373' => 'col', 'COL.COLO4_22994' => 'col', 'COL.COLO4_26389' => 'col', 'COL.COLO4_27170' => 'col', 'COL.COLO4_31074' => 'col', 'COL.COLO4_31465' => 'col', 'COL.COLO4_36438' => 'col', 'COL.COLO4_36439' => 'col', 'Cpa.g.c38781' => 'cpa', 'Cpa.g.sc128.12' => 'cpa', 'Cpa.g.sc166.7' => 'cpa', 'Cpa.g.sc166.8' => 'cpa', 'Cpa.g.sc20.111' => 'cpa', 'Cpa.g.sc27.31' => 'cpa', 'Cpa.g.sc64.36' => 'cpa', 'Cpa.g.sc64.37' => 'cpa', 'Cpa.g.sc66.49' => 'cpa', 'Cpa.g.sc80.64' => 'cpa', 'CsaV3_1G012320' => 'csa', 'CsaV3_2G008480' => 'csa', 'CsaV3_2G033450' => 'csa', 'CsaV3_3G044830' => 'csa', 'CsaV3_4G033710' => 'csa', 'CsaV3_6G051730' => 'csa', 'CsaV3_7G025350' => 'csa', 'CSS0001067' => 'camsi', 'CSS0005996' => 'camsi', 'CSS0006590' => 'camsi', 'CSS0009673' => 'camsi', 'CSS0010201' => 'camsi', 'CSS0010549' => 'camsi', 'CSS0011364' => 'camsi', 'CSS0014473' => 'camsi', 'CSS0014961' => 'camsi', 'CSS0020191' => 'camsi', 'CSS0021165' => 'camsi', 'CSS0022306' => 'camsi', 'CSS0030591' => 'camsi', 'CSS0030696' => 'camsi', 'CSS0032653' => 'camsi', 'CSS0037487' => 'camsi', 'CSS0041102' => 'camsi', 'CSS0041261' => 'camsi', 'CSS0046246' => 'camsi', 'CSS0049256' => 'camsi', 'DCAR_004075' => 'dca', 'DCAR_011538' => 'dca', 'DCAR_019553' => 'dca', 'DCAR_020952' => 'dca', 'DCAR_021739' => 'dca', 'DCAR_027407' => 'dca', 'DCAR_027913' => 'dca', 'DCAR_028066' => 'dca', 'Dinv05899' => 'din', 'Dinv07563' => 'din', 'Dinv08010' => 'din', 'Dinv14125' => 'din', 'Dinv20172' => 'din', 'Dinv30743' => 'din', 'Dinv31229' => 'din', 'Dinv34162' => 'din', 'Dinv36028' => 'din', 'Dinv39368' => 'din', 'Dinv40565' => 'din', 'Dinv41706' => 'din', 'Duzib052G0089' => 'dzi', 'Duzib116G0641' => 'dzi', 'Duzib132G0069' => 'dzi', 'Duzib132G1219' => 'dzi', 'Duzib147G0278' => 'dzi', 'Duzib160G0480' => 'dzi', 'Duzib170G0661' => 'dzi', 'Duzib177G0591' => 'dzi', 'Duzib187G1353' => 'dzi', 'Duzib192G0858' => 'dzi', 'Duzib192G0883' => 'dzi', 'Duzib213G0506' => 'dzi', 'Duzib235G0289' => 'dzi', 'Duzib251G0422' => 'dzi', 'ECA232G3898' => 'eca', 'ECA233G5950' => 'eca', 'ECA234G1699' => 'eca', 'ECA234G2421' => 'eca', 'ECA236G0426' => 'eca', 'ECA236G4331' => 'eca', 'ECA248G2573' => 'eca', 'EL10Ac1g00077' => 'bvu', 'EL10Ac1g01746' => 'bvu', 'EL10Ac2g03464' => 'bvu', 'EL10Ac4g08176' => 'bvu', 'EL10Ac7g17521' => 'bvu', 'EL10Ac8g20386' => 'bvu', 'EL10Ac9g21343' => 'bvu', 'EL10Ac9g22688' => 'bvu', 'Eucgr.B03434' => 'egr', 'Eucgr.D00618' => 'egr', 'Eucgr.E02395' => 'egr', 'Eucgr.F01129' => 'egr', 'Eucgr.F02622' => 'egr', 'Eucgr.F04207' => 'egr', 'FAN01G0570' => 'fan', 'FAN03G3351' => 'fan', 'FAN06G3702' => 'fan', 'FAN07G2149' => 'fan', 'FAN10G3758' => 'fan', 'FAN11G1170' => 'fan', 'FAN11G2050' => 'fan', 'FAN11G2724' => 'fan', 'FAN12G1700' => 'fan', 'FAN12G2028' => 'fan', 'FAN15G1160' => 'fan', 'FAN15G3063' => 'fan', 'FAN16G2540' => 'fan', 'FAN16G3077' => 'fan', 'FAN16G3624' => 'fan', 'FAN17G0221' => 'fan', 'FAN20G2492' => 'fan', 'FAN20G2905' => 'fan', 'FAN21G0548' => 'fan', 'FAN21G1300' => 'fan', 'FAN22G0077' => 'fan', 'FAN22G1315' => 'fan', 'FAN24G1280' => 'fan', 'FAN24G1445' => 'fan', 'FAN24G3527' => 'fan', 'FAN25G0464' => 'fan', 'FAN25G2885' => 'fan', 'FAN25G3270' => 'fan', 'FAN27G1101' => 'fan', 'FAN27G2846' => 'fan', 'FAN27G3524' => 'fan', 'FvH4_2g11770' => 'fve', 'FvH4_2g15630' => 'fve', 'FvH4_3g05570' => 'fve', 'FvH4_3g09110' => 'fve', 'FvH4_3g19940' => 'fve', 'FvH4_4g04821' => 'fve', 'FvH4_4g31480' => 'fve', 'FvH4_7g01740' => 'fve', 'Glyma.05G130400' => 'gma', 'Glyma.05G156400' => 'gma', 'Glyma.07G197000' => 'gma', 'Glyma.08G085151' => 'gma', 'Glyma.08G114500' => 'gma', 'Glyma.08G300400' => 'gma', 'Glyma.10G215800' => 'gma', 'Glyma.12G224400' => 'gma', 'Glyma.13G179300' => 'gma', 'Glyma.13G218151' => 'gma', 'Glyma.13G238800' => 'gma', 'Glyma.13G276900' => 'gma', 'Glyma.14G078200' => 'gma', 'Glyma.15G074500' => 'gma', 'Glyma.15G094100' => 'gma', 'Glyma.17G247200' => 'gma', 'Glyma.18G120100' => 'gma', 'Glyma.20G176000' => 'gma', 'Gohir.A01G063600' => 'ghi', 'Gohir.A01G170301' => 'ghi', 'Gohir.A02G060500' => 'ghi', 'Gohir.A05G133850' => 'ghi', 'Gohir.A05G161400' => 'ghi', 'Gohir.A06G012900' => 'ghi', 'Gohir.A06G035901' => 'ghi', 'Gohir.A06G127100' => 'ghi', 'Gohir.A06G210500' => 'ghi', 'Gohir.A08G008650' => 'ghi', 'Gohir.A09G072700' => 'ghi', 'Gohir.A09G088301' => 'ghi', 'Gohir.A10G040600' => 'ghi', 'Gohir.A12G036300' => 'ghi', 'Gohir.A12G143350' => 'ghi', 'Gohir.A12G165500' => 'ghi', 'Gohir.A13G145700' => 'ghi', 'Gohir.D01G050000' => 'ghi', 'Gohir.D01G051366' => 'ghi', 'Gohir.D01G161350' => 'ghi', 'Gohir.D02G065900' => 'ghi', 'Gohir.D05G164200' => 'ghi', 'Gohir.D05G355500' => 'ghi', 'Gohir.D06G010400' => 'ghi', 'Gohir.D06G111250' => 'ghi', 'Gohir.D06G132000' => 'ghi', 'Gohir.D06G210500' => 'ghi', 'Gohir.D07G165675' => 'ghi', 'Gohir.D08G062240' => 'ghi', 'Gohir.D08G086101' => 'ghi', 'Gohir.D08G138060' => 'ghi', 'Gohir.D09G072300' => 'ghi', 'Gohir.D10G041400' => 'ghi', 'Gohir.D11G191020' => 'ghi', 'Gohir.D11G212066' => 'ghi', 'Gohir.D12G036300' => 'ghi', 'Gohir.D12G168600' => 'ghi', 'Gohir.D13G150600' => 'ghi', 'Gorai.001G057300' => 'gra', 'Gorai.002G069900' => 'gra', 'Gorai.002G200000' => 'gra', 'Gorai.003G067600' => 'gra', 'Gorai.005G074800' => 'gra', 'Gorai.006G087300' => 'gra', 'Gorai.008G037500' => 'gra', 'Gorai.008G181400' => 'gra', 'Gorai.009G169400' => 'gra', 'Gorai.009G387900' => 'gra', 'Gorai.010G013300' => 'gra', 'Gorai.010G153800' => 'gra', 'Gorai.010G255800' => 'gra', 'Gorai.011G043700' => 'gra', 'Gorai.011G198900' => 'gra', 'Gorai.013G168400' => 'gra', 'GSVIVG01005212001' => 'vvi', 'GSVIVG01006163001' => 'vvi', 'GSVIVG01009625001' => 'vvi', 'GSVIVG01014338001' => 'vvi', 'GSVIVG01020005001' => 'vvi', 'GSVIVG01021450001' => 'vvi', 'GSVIVG01023975001' => 'vvi', 'GSVIVG01034490001' => 'vvi', 'HanXRQChr04g0112071' => 'han', 'HanXRQChr05g0131151' => 'han', 'HanXRQChr09g0262371' => 'han', 'HanXRQChr09g0268401' => 'han', 'HanXRQChr10g0279241' => 'han', 'HanXRQChr10g0297961' => 'han', 'HanXRQChr11g0326231' => 'han', 'HanXRQChr11g0328471' => 'han', 'HanXRQChr16g0507941' => 'han', 'HanXRQChr17g0560211' => 'han', 'Haze_02108' => 'cav', 'Haze_02428' => 'cav', 'Haze_05593' => 'cav', 'Haze_06448' => 'cav', 'Haze_09427' => 'cav', 'Haze_12022' => 'cav', 'Haze_17612' => 'cav', 'Haze_17928' => 'cav', 'Hma1.2p1_0032F.1_g019250' => 'hma', 'Hma1.2p1_0163F.1_g072690' => 'hma', 'Hma1.2p1_0265F.1_g106710' => 'hma', 'Hma1.2p1_0286F.1_g113970' => 'hma', 'Hma1.2p1_0363F.1_g136640' => 'hma', 'Hma1.2p1_0584F.1_g183470' => 'hma', 'Hma1.2p1_0885F.1_g232570' => 'hma', 'HPP92_006022' => 'vpl', 'HPP92_007320' => 'vpl', 'HPP92_011521' => 'vpl', 'HPP92_019387' => 'vpl', 'HPP92_024038' => 'vpl', 'Hund05891' => 'sun', 'Hund06450' => 'sun', 'Hund12053' => 'sun', 'Hund16800' => 'sun', 'Hund21222' => 'sun', 'Hund22896' => 'sun', 'Hund23746' => 'sun', 'Hund27083' => 'sun', 'Lalb_Chr02g0141831' => 'lal', 'Lalb_Chr02g0141841' => 'lal', 'Lalb_Chr05g0220411' => 'lal', 'Lalb_Chr06g0162081' => 'lal', 'Lalb_Chr09g0327651' => 'lal', 'Lalb_Chr13g0295051' => 'lal', 'Lalb_Chr15g0086801' => 'lal', 'Lalb_Chr16g0383781' => 'lal', 'Lalb_Chr16g0383791' => 'lal', 'Lalb_Chr18g0055441' => 'lal', 'Lalb_Chr18g0059611' => 'lal', 'Lalb_Chr20g0109661' => 'lal', 'Lalb_Chr20g0109831' => 'lal', 'Lalb_Chr20g0121871' => 'lal', 'Lalb_Chr22g0355361' => 'lal', 'Lalb_Chr25g0286371' => 'lal', 'Lj1A1187G43' => 'lonja', 'Lj1A1205T50' => 'lonja', 'Lj1A800G33' => 'lonja', 'Lj1C1187T7' => 'lonja', 'Lj1C843T11' => 'lonja', 'Lj1g0010940' => 'lja', 'Lj2A288T69' => 'lonja', 'Lj3g0024276' => 'lja', 'Lj4A47T76' => 'lonja', 'Lj4g0005805' => 'lja', 'Lj4g0006097' => 'lja', 'Lj4g0008528' => 'lja', 'Lj4g0024907' => 'lja', 'Lj5g0012472' => 'lja', 'Lj5g0018648' => 'lja', 'Lj6C789G1' => 'lonja', 'Lj6g0004000' => 'lja', 'Lj7A292G67' => 'lonja', 'Lj7A292T64' => 'lonja', 'Lj9A400T58' => 'lonja', 'Lsat_1_v5_gn_1_126181' => 'lsa', 'Lsat_1_v5_gn_4_123041' => 'lsa', 'Lsat_1_v5_gn_4_133620' => 'lsa', 'Lsat_1_v5_gn_4_53221' => 'lsa', 'Lsat_1_v5_gn_4_71961' => 'lsa', 'Lsat_1_v5_gn_7_105241' => 'lsa', 'Lsat_1_v5_gn_7_21361' => 'lsa', 'Lsat_1_v5_gn_7_28860' => 'lsa', 'Lsat_1_v5_gn_7_31260' => 'lsa', 'Lsat_1_v5_gn_8_52801' => 'lsa', 'Manes.02G191400' => 'mes', 'Manes.03G110100' => 'mes', 'Manes.04G071100' => 'mes', 'Manes.05G100500' => 'mes', 'Manes.05G164700' => 'mes', 'Manes.15G087000' => 'mes', 'Manes.15G121500' => 'mes', 'Manes.16G028300' => 'mes', 'Manes.17G046100' => 'mes', 'Manes.17G069800' => 'mes', 'Manes.18G100500' => 'mes', 'Mapoly0002s0109' => 'mpo', 'Mapoly0024s0007' => 'mpo', 'Mapoly0089s0032' => 'mpo', 'MBI04_g42241_MAGBIO' => 'mbi', 'MBI05_g11988_MAGBIO' => 'mbi', 'MBI05_g35452_MAGBIO' => 'mbi', 'MBI07_g30179_MAGBIO' => 'mbi', 'MBI07_g35859_MAGBIO' => 'mbi', 'MBI07_g35860_MAGBIO' => 'mbi', 'MBI07_g37166_MAGBIO' => 'mbi', 'MBI08_g18172_MAGBIO' => 'mbi', 'MBI09_g08441_MAGBIO' => 'mbi', 'MBI13_g01676_MAGBIO' => 'mbi', 'MBI14_g42955_MAGBIO' => 'mbi', 'MBI16_g13161_MAGBIO' => 'mbi', 'MBI17_g27204_MAGBIO' => 'mbi', 'MBI19_g21595_MAGBIO' => 'mbi', 'MD00G1148400' => 'mdo', 'MD02G1301200' => 'mdo', 'MD03G1227800' => 'mdo', 'MD05G1041100' => 'mdo', 'MD05G1124800' => 'mdo', 'MD05G1284000' => 'mdo', 'MD05G1338800' => 'mdo', 'MD05G1338900' => 'mdo', 'MD07G1022800' => 'mdo', 'MD10G1047500' => 'mdo', 'MD10G1127500' => 'mdo', 'MD10G1262300' => 'mdo', 'MD10G1293800' => 'mdo', 'MD16G1074300' => 'mdo', 'Medtr1g021670' => 'mtr', 'Medtr1g096320' => 'mtr', 'Medtr2g013690' => 'mtr', 'Medtr2g019450' => 'mtr', 'Medtr2g085170' => 'mtr', 'Medtr4g088785' => 'mtr', 'Medtr8g055930' => 'mtr', 'Medtr8g085850' => 'mtr', 'MELO3C002605.2' => 'cme', 'MELO3C003891.2' => 'cme', 'MELO3C004012.2' => 'cme', 'MELO3C007134.2' => 'cme', 'MELO3C008118.2' => 'cme', 'MELO3C016700.2' => 'cme', 'MELO3C024127.2' => 'cme', 'MELO3C033361.2' => 'cme', 'MELO3C033362.2' => 'cme', 'Migut.C00430' => 'egut', 'Migut.C01246' => 'egut', 'Migut.E00101' => 'egut', 'Migut.H01486' => 'egut', 'Migut.H01939' => 'egut', 'Migut.K00360' => 'egut', 'Migut.M00910' => 'egut', 'Migut.M01139' => 'egut', 'Migut.N02677' => 'egut', 'MSTRG.13252' => 'ama', 'MSTRG.14701' => 'ama', 'MSTRG.1521' => 'ama', 'MSTRG.15884' => 'ama', 'MSTRG.16242' => 'ama', 'MSTRG.22285' => 'ama', 'MSTRG.22444' => 'ama', 'MSTRG.2349' => 'ama', 'MSTRG.26308' => 'ama', 'MSTRG.28296' => 'ama', 'MSTRG.9895' => 'ama', 'Nitab4.5_0000110g0060' => 'nta', 'Nitab4.5_0000420g0130' => 'nta', 'Nitab4.5_0000422g0030' => 'nta', 'Nitab4.5_0000560g0180' => 'nta', 'Nitab4.5_0000703g0100' => 'nta', 'Nitab4.5_0000786g0200' => 'nta', 'Nitab4.5_0001336g0020' => 'nta', 'Nitab4.5_0001796g0030' => 'nta', 'Nitab4.5_0003348g0060' => 'nta', 'Nitab4.5_0003698g0040' => 'nta', 'Nitab4.5_0003942g0090' => 'nta', 'Nitab4.5_0004775g0070' => 'nta', 'Nitab4.5_0004864g0030' => 'nta', 'Nitab4.5_0005615g0020' => 'nta', 'Nitab4.5_0009288g0030' => 'nta', 'Nitab4.5_0009341g0010' => 'nta', 'Nitab4.5_0009535g0010' => 'nta', 'Nn1g03995' => 'nnu', 'Nn1g04100' => 'nnu', 'Nn1g06530' => 'nnu', 'Nn3g16404' => 'nnu', 'Nn3g17212' => 'nnu', 'Nn3g20776' => 'nnu', 'Nn3g21923' => 'nnu', 'Nn5g27737' => 'nnu', 'Nn5g29461' => 'nnu', 'Nn7g38355' => 'nnu', 'Nn8g39873' => 'nnu', 'Oeu000548.2' => 'oeu', 'Oeu004672.1' => 'oeu', 'Oeu015605.2' => 'oeu', 'Oeu016092.1' => 'oeu', 'Oeu017879.3' => 'oeu', 'Oeu024910.1' => 'oeu', 'Oeu028965.1' => 'oeu', 'Oeu031269.1' => 'oeu', 'Oeu031270.1' => 'oeu', 'Oeu032535.1' => 'oeu', 'Oeu034151.1' => 'oeu', 'Oeu034152.1' => 'oeu', 'Oeu034588.2' => 'oeu', 'Oeu050846.1' => 'oeu', 'Oeu050849.2' => 'oeu', 'Oeu051063.2' => 'oeu', 'Oeu052368.1' => 'oeu', 'Oeu052370.1' => 'oeu', 'Os01g0210400' => 'osa', 'Os01g0304300' => 'osa', 'Os01g0749100' => 'osa', 'Os02g0745800' => 'osa', 'Os03g0769050' => 'osa', 'Os05g0531500' => 'osa', 'Os06g0724300' => 'osa', 'Os11g0198100' => 'osa', 'Peaxi162Scf00069g01425' => 'pax', 'Peaxi162Scf00280g00811' => 'pax', 'Peaxi162Scf00310g00615' => 'pax', 'Peaxi162Scf00362g00542' => 'pax', 'Peaxi162Scf00461g00310' => 'pax', 'Peaxi162Scf00530g00118' => 'pax', 'Peaxi162Scf00541g00057' => 'pax', 'Peaxi162Scf00661g00017' => 'pax', 'Peaxi162Scf00926g00027' => 'pax', 'Peaxi162Scf01064g00263' => 'pax', 'Peaxi162Scf01211g00135' => 'pax', 'PGR004G2336' => 'pgr', 'PGR042G0327' => 'pgr', 'PGR042G1957' => 'pgr', 'PGR042G2003' => 'pgr', 'PGR042G3929' => 'pgr', 'PGR083G1137' => 'pgr', 'PGR083G1364' => 'pgr', 'PGSC0003DMG400003381' => 'stu', 'PGSC0003DMG400003417' => 'stu', 'PGSC0003DMG400008981' => 'stu', 'PGSC0003DMG400012417' => 'stu', 'PGSC0003DMG400012823' => 'stu', 'PGSC0003DMG400016885' => 'stu', 'PGSC0003DMG400022812' => 'stu', 'PGSC0003DMG400029726' => 'stu', 'PGSC0003DMG401009243' => 'stu', 'PGSC0003DMG401031505' => 'stu', 'PGSC0003DMG402031505' => 'stu', 'Phvul.001G017600' => 'pvu', 'Phvul.002G193500' => 'pvu', 'Phvul.002G228900' => 'pvu', 'Phvul.002G236800' => 'pvu', 'Phvul.003G049500' => 'pvu', 'Phvul.005G072000' => 'pvu', 'Phvul.006G164800' => 'pvu', 'Phvul.006G185100' => 'pvu', 'Phvul.007G090000' => 'pvu', 'Potri.001G399800' => 'ptr', 'Potri.002G149900' => 'ptr', 'Potri.004G044100' => 'ptr', 'Potri.004G177600' => 'ptr', 'Potri.009G138000' => 'ptr', 'Potri.010G094000' => 'ptr', 'Potri.011G053000' => 'ptr', 'Potri.011G119300' => 'ptr', 'Potri.013G113700' => 'ptr', 'Potri.018G107800' => 'ptr', 'Potri.019G084100' => 'ptr', 'Pp3c14_23720' => 'ppa', 'Pp3c16_6340' => 'ppa', 'Pp3c23_13420' => 'ppa', 'Pp3c24_2740' => 'ppa', 'Pp3c25_860' => 'ppa', 'Pp3c8_21750' => 'ppa', 'Prupe.1G273000' => 'ppe', 'Prupe.1G273700' => 'ppe', 'Prupe.1G274100' => 'ppe', 'Prupe.2G023300' => 'ppe', 'Prupe.4G048000' => 'ppe', 'Prupe.4G080400' => 'ppe', 'Prupe.4G181200' => 'ppe', 'Prupe.8G056900' => 'ppe', 'Prupe.8G168700' => 'ppe', 'Psat1g189080' => 'psa', 'Psat1g204760' => 'psa', 'Psat4g175560' => 'psa', 'Psat4g177720' => 'psa', 'Psat5g244240' => 'psa', 'Psat6g010720' => 'psa', 'Psat6g187200' => 'psa', 'Psat7g072040' => 'psa', 'PSO017G3501' => 'pso', 'PSO063G2148' => 'pso', 'PSO063G5608' => 'pso', 'PSO210G6392' => 'pso', 'PSO541G2319' => 'pso', 'PSO541G2836' => 'pso', 'PSO541G4012' => 'pso', 'PSO541G6253' => 'pso', 'PSO675G0580' => 'pso', 'PSO675G0856' => 'pso', 'PSO675G5635' => 'pso', 'PSO675G9157' => 'pso', 'PSO832G1660' => 'pso', 'PSO832G1969' => 'pso', 'QL02p007186' => 'qlo', 'QL02p033904' => 'qlo', 'QL03p064391' => 'qlo', 'QL05p040593' => 'qlo', 'QL05p058242' => 'qlo', 'QL08p021825' => 'qlo', 'QL11p004981' => 'qlo', 'RcHm_v2.0_Chr1g0318301' => 'rch', 'RcHm_v2.0_Chr4g0418501' => 'rch', 'RcHm_v2.0_Chr4g0439971' => 'rch', 'RcHm_v2.0_Chr5g0008541' => 'rch', 'RcHm_v2.0_Chr5g0014101' => 'rch', 'RcHm_v2.0_Chr5g0014131' => 'rch', 'RcHm_v2.0_Chr5g0033621' => 'rch', 'RcHm_v2.0_Chr6g0272041' => 'rch', 'RcHm_v2.0_Chr6g0278831' => 'rch', 'Rhsim02G0130400' => 'rsi', 'Rhsim02G0171100' => 'rsi', 'Rhsim05G0053000' => 'rsi', 'Rhsim05G0053100' => 'rsi', 'Rhsim06G0096500' => 'rsi', 'Rhsim06G0096600' => 'rsi', 'Rhsim06G0199100' => 'rsi', 'Rhsim12G0062300' => 'rsi', 'Rhsim12G0062800' => 'rsi', 'Sabra02G0118600' => 'sbr', 'Sabra04G0027300' => 'sbr', 'Sabra04G0119500' => 'sbr', 'Sabra08G0112500' => 'sbr', 'Sabra11G0036800' => 'sbr', 'Sabra11G0103800' => 'sbr', 'Sabra13G0096300' => 'sbr', 'Sabra16G0262300' => 'sbr', 'Sabra18G0091700' => 'sbr', 'Sabra19G0095400' => 'sbr', 'SalBow6G3080' => 'sbo', 'SalBow7G1157' => 'sbo', 'SalBow7G2123' => 'sbo', 'SalBow7G2285' => 'sbo', 'SalBow7G3537' => 'sbo', 'SalBow8G2947' => 'sbo', 'SalBow8G4463' => 'sbo', 'SalBow8G5466' => 'sbo', 'Sc01g0001750' => 'sci', 'Sc02g0006640' => 'sci', 'Sc02g0006670' => 'sci', 'Sc04g0008220' => 'sci', 'Sc05g0006190' => 'sci', 'Sc08g0002760' => 'sci', 'Sc17g0006170' => 'sci', 'Sc22g0002050' => 'sci', 'Sc23g0001190' => 'sci', 'Sc24g0000980' => 'sci', 'Sed0006245' => 'sed', 'Sed0007543' => 'sed', 'Sed0009411' => 'sed', 'Sed0010765' => 'sed', 'Sed0012944' => 'sed', 'Sed0014682' => 'sed', 'Sed0016174' => 'sed', 'Sed0016796' => 'sed', 'Sed0020317' => 'sed', 'Sed0021467' => 'sed', 'SEGI_01316' => 'sgi', 'SEGI_03374' => 'sgi', 'SEGI_16265' => 'sgi', 'SEGI_18569' => 'sgi', 'SEGI_20351' => 'sgi', 'SEGI_26395' => 'sgi', 'SEGI_29469' => 'sgi', 'SEGI_34771' => 'sgi', 'SEGI_36769' => 'sgi', 'SEGI_37139' => 'sgi', 'SGA_v2.0_scaffold100G29687' => 'sas', 'SGA_v2.0_scaffold118G32472' => 'sas', 'SGA_v2.0_scaffold14G07051' => 'sas', 'SGA_v2.0_scaffold183G39845' => 'sas', 'SGA_v2.0_scaffold1G00174' => 'sas', 'SGA_v2.0_scaffold22G09714' => 'sas', 'SGA_v2.0_scaffold333G48992' => 'sas', 'SGA_v2.0_scaffold46G17491' => 'sas', 'SGA_v2.0_scaffold49G18294' => 'sas', 'SGA_v2.0_scaffold63G21658' => 'sas', 'SHI01741' => 'shi', 'SHI05771' => 'shi', 'SHI18077' => 'shi', 'SHI20525' => 'shi', 'SHI20527' => 'shi', 'SHI20528' => 'shi', 'SMO172G0185' => 'smo', 'SMO198G0020' => 'smo', 'SMO351G0006' => 'smo', 'SMO356G0118' => 'smo', 'SMO358G0296' => 'smo', 'SMO367G0079' => 'smo', 'SMO367G1277' => 'smo', 'Solyc01g014220.3' => 'sly', 'Solyc01g111770.2' => 'sly', 'Solyc02g078180.3' => 'sly', 'Solyc03g006430.3' => 'sly', 'Solyc03g006456.1' => 'sly', 'Solyc03g079860.2' => 'sly', 'Solyc04g079770.3' => 'sly', 'Solyc05g007430.4' => 'sly', 'Solyc07g063150.3' => 'sly', 'Solyc08g016620.3' => 'sly', 'Solyc09g057590.3' => 'sly', 'Solyc09g057600.1' => 'sly', 'Solyc10g009050.3' => 'sly', 'Solyc11g017420.2' => 'sly', 'Sopen01g053810' => 'spe', 'Sopen02g023040' => 'spe', 'Sopen03g002440' => 'spe', 'Sopen04g033350' => 'spe', 'Sopen05g003310' => 'spe', 'Sopen07g004050' => 'spe', 'Sopen07g031340' => 'spe', 'Sopen08g006990' => 'spe', 'Sopen10g004830' => 'spe', 'Sopen11g009370' => 'spe', 'Sp1g24450' => 'spa', 'Sp1g29670' => 'spa', 'Sp1g39600' => 'spa', 'Sp2g11080' => 'spa', 'Sp2g13970' => 'spa', 'Sp4g16130' => 'spa', 'Sp6g13080' => 'spa', 'Sp7g37270' => 'spa', 'TAR371G0065' => 'tar', 'TAR376G0340' => 'tar', 'TAR376G0435' => 'tar', 'TAR381G0002' => 'tar', 'TAR381G1236' => 'tar', 'TAR624G0055' => 'tar', 'TAR624G0324' => 'tar', 'TAR624G0696' => 'tar', 'TAR624G0906' => 'tar', 'TAR625G0107' => 'tar', 'TAR626G0015' => 'tar', 'TAR626G1356' => 'tar', 'TAR627G0888' => 'tar', 'TAR628G0399' => 'tar', 'TAR628G1327' => 'tar', 'TAR629G2831' => 'tar', 'TAR629G2874' => 'tar', 'TAR633G1432' => 'tar', 'TAR633G2771' => 'tar', 'THA.LOC104803394' => 'tha', 'THA.LOC104805153' => 'tha', 'THA.LOC104806784' => 'tha', 'THA.LOC104810473' => 'tha', 'THA.LOC104813100' => 'tha', 'THA.LOC104814215' => 'tha', 'THA.LOC104815554' => 'tha', 'THA.LOC104820544' => 'tha', 'THA.LOC104824754' => 'tha', 'THA.LOC104827717' => 'tha', 'Thecc.02G031400' => 'tca', 'Thecc.02G055900' => 'tca', 'Thecc.02G350800' => 'tca', 'Thecc.06G150900' => 'tca', 'Thecc.06G186600' => 'tca', 'Thecc.07G089600' => 'tca', 'Thecc.08G020400' => 'tca', 'Thecc.08G182100' => 'tca', 'Thhalv10000873m.g' => 'esa', 'Thhalv10004185m.g' => 'esa', 'Thhalv10006981m.g' => 'esa', 'Thhalv10007204m.g' => 'esa', 'Thhalv10011374m.g' => 'esa', 'Thhalv10013482m.g' => 'esa', 'Thhalv10017801m.g' => 'esa', 'Thhalv10024983m.g' => 'esa', 'TPR.G12072' => 'tpr', 'TPR.G15769' => 'tpr', 'TPR.G16504' => 'tpr', 'TPR.G16506' => 'tpr', 'TPR.G24345' => 'tpr', 'TPR.G26666' => 'tpr', 'TPR.G27320' => 'tpr', 'TPR.G31819' => 'tpr', 'TPR.G38879' => 'tpr', 'TPR.G39015' => 'tpr', 'TPR.G8819' => 'tpr', 'TWI09G0924' => 'twi', 'TWI12G0811' => 'twi', 'TWI12G1294' => 'twi', 'TWI31G0150' => 'twi', 'TWI36G1262' => 'twi', 'TWI38G1287' => 'twi', 'TWI38G1633' => 'twi', 'TWI38G1982' => 'twi', 'TWI39G0116' => 'twi', 'TWI60G1011' => 'twi', 'TWI63G0171' => 'twi', 'TWI73G0839' => 'twi', 'TWI79G1511' => 'twi', 'unitig_0.g915' => 'ugi', 'unitig_0.g916' => 'ugi', 'unitig_21.g20219' => 'ugi', 'unitig_21.g20416' => 'ugi', 'unitig_578.g16132' => 'ugi', 'unitig_578.g16718' => 'ugi', 'unitig_62.g23481' => 'ugi', 'unitig_744.g24535' => 'ugi', 'unitig_749.g13525' => 'ugi', 'vmacro01248' => 'vma', 'vmacro02290' => 'vma', 'vmacro10946' => 'vma', 'vmacro11865' => 'vma', 'vmacro12493' => 'vma', 'vmacro17322' => 'vma', 'vmacro21599' => 'vma', 'vmacro23041' => 'vma', 'VMungo0251G0004' => 'vmu', 'VMungo0251G2639' => 'vmu', 'VMungo0251G2967' => 'vmu', 'VMungo0540G0864' => 'vmu', 'VMungo0540G1569' => 'vmu', 'VMungo0647G0317' => 'vmu', 'VMungo0720G1373' => 'vmu', 'VMungo0720G1508' => 'vmu', 'VMungo1080G0485' => 'vmu', 'VMungo1215G3177' => 'vmu', 'Zm00001eb112600' => 'zma', 'Zm00001eb120220' => 'zma', 'Zm00001eb153240' => 'zma', 'Zm00001eb168880' => 'zma', 'Zm00001eb213920' => 'zma', 'Zm00001eb228280' => 'zma', 'Zm00001eb254580' => 'zma', 'Zm00001eb272180' => 'zma', 'Zm00001eb293190' => 'zma', 'Zm00001eb322930' => 'zma', 'Zm00001eb353360' => 'zma', 'Zm00001eb353390' => 'zma', 'Zm00001eb353430' => 'zma', 'Zm00001eb353440' => 'zma', 'Zm00001eb353780' => 'zma' ) $gf_id = 'HOM05D000499' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000499' ) $data_identifier = 'HOM05D000499' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 29, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 12, 'amhyb' => (int) 8, 'aly' => (int) 12, 'aox' => (int) 9, 'arhy' => (int) 26, 'ath' => (int) 8, 'atr' => (int) 7, 'acertr' => (int) 10, 'cqu' => (int) 15, 'bca' => (int) 29, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 11, 'cansat' => (int) 8, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 9, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 8, 'cpa' => (int) 10, 'csa' => (int) 7, 'camsi' => (int) 20, 'dca' => (int) 8, 'din' => (int) 12, 'dzi' => (int) 14, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 6, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 38, 'gra' => (int) 16, 'vvi' => (int) 8, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 5, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 11, 'lja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 11, 'mpo' => (int) 3, 'mbi' => (int) 14, 'mdo' => (int) 14, 'mtr' => (int) 8, 'cme' => (int) 9, 'egut' => (int) 9, 'ama' => (int) 11, 'nta' => (int) 17, 'nnu' => (int) 11, 'oeu' => (int) 18, 'osa' => (int) 8, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 6, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 9, 'rsi' => (int) 9, 'sbr' => (int) 10, 'sbo' => (int) 8, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 10, 'sas' => (int) 10, 'shi' => (int) 6, 'smo' => (int) 7, 'sly' => (int) 14, 'spe' => (int) 10, 'spa' => (int) 8, 'tar' => (int) 19, 'tha' => (int) 10, 'tca' => (int) 8, 'esa' => (int) 8, 'tpr' => (int) 11, 'twi' => (int) 13, 'ugi' => (int) 9, 'vma' => (int) 8, 'vmu' => (int) 10, 'zma' => (int) 15 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb353780' $species_info = array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ) $local_species = 'tar' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000499', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1066', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p29780' => 'bna', 'A02p33180' => 'bna', 'A03p16470' => 'bna', 'A03p66010' => 'bna', 'A04p25970' => 'bna', 'A06p01270' => 'bna', 'A06p46080' => 'bna', 'A07p11400' => 'bna', 'A08p01840' => 'bna', 'A08p08230' => 'bna', 'A08p25740' => 'bna', 'A09p32070' => 'bna', 'A09p37830' => 'bna', 'A09p42840' => 'bna', 'A09p42850' => 'bna', 'Aa31LG10G2060' => 'aar', 'Aa31LG2G7410' => 'aar', 'Aa31LG6G10200' => 'aar', 'Aa31LG6G16680' => 'aar', 'Aa31LG6G8470' => 'aar', 'Aa31LG9G12730' => 'aar', 'Aa31LG9G13680' => 'aar', 'Aa31LG9G14920' => 'aar', 'Aa31LG9G6650' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4977' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5467' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3254' => 'aag', 'Actinidia02578' => 'ach', 'Actinidia07693' => 'ach', 'Actinidia08413' => 'ach', 'Actinidia08414' => 'ach', 'Actinidia15289' => 'ach', 'Actinidia19871' => 'ach', 'Actinidia21475' => 'ach', 'Actinidia22576' => 'ach', 'Actinidia28327' => 'ach', 'Actinidia32491' => 'ach', 'Actinidia39463' => 'ach', 'Actinidia39571' => 'ach', 'Ah.01g013750' => 'amhyb', 'Ah.01g023210' => 'amhyb', 'Ah.04g164850' => 'amhyb', 'Ah.05g178060' => 'amhyb', 'Ah.07g204270' => 'amhyb', 'Ah.07g208480' => 'amhyb', 'Ah.09g237410' => 'amhyb', 'Ah.14g089460' => 'amhyb', 'AL1G41790' => 'aly', 'AL1G49050' => 'aly', 'AL1G53810' => 'aly', 'AL1G61400' => 'aly', 'AL4G18580' => 'aly', 'AL5G12510' => 'aly', 'AL5G12540' => 'aly', 'AL6G43230' => 'aly', 'AL7G10370' => 'aly', 'AL7G19250' => 'aly', 'AL8G12240' => 'aly', 'AL8G18540' => 'aly', 'Aqoxy1G02409' => 'aox', 'Aqoxy2G03993' => 'aox', 'Aqoxy3G03357' => 'aox', 'Aqoxy4G00785' => 'aox', 'Aqoxy5G02598' => 'aox', 'Aqoxy6G00132' => 'aox', 'Aqoxy7G01776' => 'aox', 'Aqoxy7G02316' => 'aox', 'Aqoxy7G03973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.12AFKW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B8730' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27IQR1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3F75VG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3RE0GA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41TCQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.527VTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FIR39' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5W8UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DA38EV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ63HS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H1I32C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HC27T5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4M8AP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7N3CZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9UVDZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LS1NQA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT1D4B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SKC4TM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCFV76' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF9Q1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQWD9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1ZM88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WE07RT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YCK7VH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJE6Q6' => 'arhy', 'AT1G28240' => 'ath', 'AT1G34550' => 'ath', 'AT1G53040' => 'ath', 'AT2G02910' => 'ath', 'AT4G09630' => 'ath', 'AT4G38500' => 'ath', 'AT5G42660' => 'ath', 'AT5G46220' => 'ath', 'ATR0152G026' => 'atr', 'ATR0564G343' => 'atr', 'ATR0706G151' => 'atr', 'ATR0733G207' => 'atr', 'ATR0751G234' => 'atr', 'ATR0807G048' => 'atr', 'ATR1091G084' => 'atr', 'Atru.chr10.1229' => 'acertr', 'Atru.chr10.1230' => 'acertr', 'Atru.chr10.1874' => 'acertr', 'Atru.chr11.1808' => 'acertr', 'Atru.chr13.1795' => 'acertr', 'Atru.chr13.570' => 'acertr', 'Atru.chr2.2608' => 'acertr', 'Atru.chr2.2609' => 'acertr', 'Atru.chr5.3428' => 'acertr', 'Atru.chr8.1171' => 'acertr', 'AUR62004651' => 'cqu', 'AUR62008675' => 'cqu', 'AUR62010014' => 'cqu', 'AUR62013004' => 'cqu', 'AUR62014825' => 'cqu', 'AUR62015015' => 'cqu', 'AUR62015151' => 'cqu', 'AUR62017020' => 'cqu', 'AUR62019422' => 'cqu', 'AUR62023570' => 'cqu', 'AUR62025571' => 'cqu', 'AUR62029098' => 'cqu', 'AUR62033863' => 'cqu', 'AUR62034296' => 'cqu', 'AUR62040075' => 'cqu', 'BcaB02g07334' => 'bca', 'BcaB02g10575' => 'bca', 'BcaB03g12119' => 'bca', 'BcaB03g12120' => 'bca', 'BcaB03g13945' => 'bca', 'BcaB04g17123' => 'bca', 'BcaB04g17867' => 'bca', 'BcaB04g19839' => 'bca', 'BcaB07g30317' => 'bca', 'BcaB07g32432' => 'bca', 'BcaB07g33362' => 'bca', 'BcaB08g36611' => 'bca', 'BcaC01g00028' => 'bca', 'BcaC01g01356' => 'bca', 'BcaC01g02034' => 'bca', 'BcaC01g06051' => 'bca', 'BcaC03g16839' => 'bca', 'BcaC03g17176' => 'bca', 'BcaC05g26829' => 'bca', 'BcaC06g31490' => 'bca', 'BcaC06g35344' => 'bca', 'BcaC06g36570' => 'bca', 'BcaC07g37537' => 'bca', 'BcaC08g43491' => 'bca', 'BcaC08g43773' => 'bca', 'BcaNung00234' => 'bca', 'BcaNung01982' => 'bca', 'BcaNung03707' => 'bca', 'BcaNung06454' => 'bca', 'BolC2t10762H' => 'bol', 'BolC2t11191H' => 'bol', 'BolC3t14322H' => 'bol', 'BolC3t19747H' => 'bol', 'BolC3t21425H' => 'bol', 'BolC4t27800H' => 'bol', 'BolC5t31423H' => 'bol', 'BolC6t35951H' => 'bol', 'BolC6t36282H' => 'bol', 'BolC7t40678H' => 'bol', 'BolC7t40679H' => 'bol', 'BolC7t42222H' => 'bol', 'BolC7t43492H' => 'bol', 'BolC7t46785H' => 'bol', 'BolC8t47853H' => 'bol', 'BolC9t56805H' => 'bol', 'BraA02t08000Z' => 'bra', 'BraA02t08341Z' => 'bra', 'BraA03t10936Z' => 'bra', 'BraA03t15657Z' => 'bra', 'BraA04t18100Z' => 'bra', 'BraA05t20523Z' => 'bra', 'BraA06t23353Z' => 'bra', 'BraA06t27473Z' => 'bra', 'BraA06t27769Z' => 'bra', 'BraA07t28928Z' => 'bra', 'BraA08t32236Z' => 'bra', 'BraA08t32841Z' => 'bra', 'BraA08t34524Z' => 'bra', 'BraA09t38742Z' => 'bra', 'BraA09t39295Z' => 'bra', 'C02p47180' => 'bna', 'C02p50990' => 'bna', 'C03p19360' => 'bna', 'C03p74950' => 'bna', 'C03p91000' => 'bna', 'C04p63260' => 'bna', 'C05p27050' => 'bna', 'C06p08750' => 'bna', 'C06p11490' => 'bna', 'C07p02820' => 'bna', 'C07p17180' => 'bna', 'C07p29440' => 'bna', 'C07p63730' => 'bna', 'C09p39260' => 'bna', 'CAN.G1164.34' => 'can', 'CAN.G1164.39' => 'can', 'CAN.G1530.3' => 'can', 'CAN.G162.61' => 'can', 'CAN.G176.6' => 'can', 'CAN.G289.49' => 'can', 'CAN.G370.21' => 'can', 'CAN.G370.22' => 'can', 'CAN.G371.117' => 'can', 'CAN.G58.37' => 'can', 'CAN.G588.98' => 'can', 'CANSAT21G2266' => 'cansat', 'CANSAT25G2799' => 'cansat', 'CANSAT35G0862' => 'cansat', 'CANSAT35G1704' => 'cansat', 'CANSAT35G1760' => 'cansat', 'CANSAT56G3971' => 'cansat', 'CANSAT56G4116' => 'cansat', 'CANSAT80G1259' => 'cansat', 'CARHR027730' => 'chi', 'CARHR033880' => 'chi', 'CARHR043270' => 'chi', 'CARHR145330' => 'chi', 'CARHR145340' => 'chi', 'CARHR175570' => 'chi', 'CARHR181570' => 'chi', 'CARHR258470' => 'chi', 'CARHR260490' => 'chi', 'CARHR294220' => 'chi', 'Carub.0001s2668' => 'cru', 'Carub.0001s3257' => 'cru', 'Carub.0001s4220' => 'cru', 'Carub.0005s0179' => 'cru', 'Carub.0006s2807' => 'cru', 'Carub.0007s0039' => 'cru', 'Carub.0008s0169' => 'cru', 'Carub.0008s0636' => 'cru', 'Ca_00338_v3' => 'car', 'Ca_00542_v3' => 'car', 'Ca_01844_v3' => 'car', 'Ca_10611_v3' => 'car', 'Ca_13326_v3' => 'car', 'Ca_17944_v3' => 'car', 'Ca_18546_v3' => 'car', 'Ca_24219_v3' => 'car', 'Ca_29972_v3' => 'car', 'CBR_g3681' => 'cbr', 'CBR_g40021' => 'cbr', 'Cc01_g08140' => 'ccan', 'Cc02_g13410' => 'ccan', 'Cc02_g37480' => 'ccan', 'Cc05_g12030' => 'ccan', 'Cc09_g03370' => 'ccan', 'Cc09_g10300' => 'ccan', 'Cc10_g03530' => 'ccan', 'Cc10_g11380' => 'ccan', 'CDE01G0176' => 'cde', 'CDE02G0675' => 'cde', 'CDE02G0942' => 'cde', 'CDE02G1153' => 'cde', 'CDE02G4177' => 'cde', 'CDE04G2117' => 'cde', 'CDE04G2736' => 'cde', 'CDE08G1161' => 'cde', 'CDE09G1238' => 'cde', 'Cfa000467' => 'cfa', 'Cfa000947' => 'cfa', 'Cfa004969' => 'cfa', 'Cfa005284' => 'cfa', 'Cfa008993' => 'cfa', 'Cfa018187' => 'cfa', 'Cfa018454' => 'cfa', 'Cfa020585' => 'cfa', 'Ciclev10000424m.g' => 'ccl', 'Ciclev10003605m.g' => 'ccl', 'Ciclev10007828m.g' => 'ccl', 'Ciclev10014620m.g' => 'ccl', 'Ciclev10015169m.g' => 'ccl', 'Ciclev10018291m.g' => 'ccl', 'Ciclev10028256m.g' => 'ccl', 'Ciclev10033822m.g' => 'ccl', 'CiPaw.05G060300' => 'cil', 'CiPaw.05G085000' => 'cil', 'CiPaw.06G083700' => 'cil', 'CiPaw.06G120300' => 'cil', 'CiPaw.09G060500' => 'cil', 'CiPaw.09G123800' => 'cil', 'CiPaw.11G169700' => 'cil', 'CiPaw.12G118300' => 'cil', 'CiPaw.15G071000' => 'cil', 'CiPaw.15G081900' => 'cil', 'ClCG01G024610' => 'cla', 'ClCG03G006070' => 'cla', 'ClCG05G019250' => 'cla', 'ClCG09G009500' => 'cla', 'ClCG11G008200' => 'cla', 'ClCG11G018080' => 'cla', 'COL.COLO4_17373' => 'col', 'COL.COLO4_22994' => 'col', 'COL.COLO4_26389' => 'col', 'COL.COLO4_27170' => 'col', 'COL.COLO4_31074' => 'col', 'COL.COLO4_31465' => 'col', 'COL.COLO4_36438' => 'col', 'COL.COLO4_36439' => 'col', 'Cpa.g.c38781' => 'cpa', 'Cpa.g.sc128.12' => 'cpa', 'Cpa.g.sc166.7' => 'cpa', 'Cpa.g.sc166.8' => 'cpa', 'Cpa.g.sc20.111' => 'cpa', 'Cpa.g.sc27.31' => 'cpa', 'Cpa.g.sc64.36' => 'cpa', 'Cpa.g.sc64.37' => 'cpa', 'Cpa.g.sc66.49' => 'cpa', 'Cpa.g.sc80.64' => 'cpa', 'CsaV3_1G012320' => 'csa', 'CsaV3_2G008480' => 'csa', 'CsaV3_2G033450' => 'csa', 'CsaV3_3G044830' => 'csa', 'CsaV3_4G033710' => 'csa', 'CsaV3_6G051730' => 'csa', 'CsaV3_7G025350' => 'csa', 'CSS0001067' => 'camsi', 'CSS0005996' => 'camsi', 'CSS0006590' => 'camsi', 'CSS0009673' => 'camsi', 'CSS0010201' => 'camsi', 'CSS0010549' => 'camsi', 'CSS0011364' => 'camsi', 'CSS0014473' => 'camsi', 'CSS0014961' => 'camsi', 'CSS0020191' => 'camsi', 'CSS0021165' => 'camsi', 'CSS0022306' => 'camsi', 'CSS0030591' => 'camsi', 'CSS0030696' => 'camsi', 'CSS0032653' => 'camsi', 'CSS0037487' => 'camsi', 'CSS0041102' => 'camsi', 'CSS0041261' => 'camsi', 'CSS0046246' => 'camsi', 'CSS0049256' => 'camsi', 'DCAR_004075' => 'dca', 'DCAR_011538' => 'dca', 'DCAR_019553' => 'dca', 'DCAR_020952' => 'dca', 'DCAR_021739' => 'dca', 'DCAR_027407' => 'dca', 'DCAR_027913' => 'dca', 'DCAR_028066' => 'dca', 'Dinv05899' => 'din', 'Dinv07563' => 'din', 'Dinv08010' => 'din', 'Dinv14125' => 'din', 'Dinv20172' => 'din', 'Dinv30743' => 'din', 'Dinv31229' => 'din', 'Dinv34162' => 'din', 'Dinv36028' => 'din', 'Dinv39368' => 'din', 'Dinv40565' => 'din', 'Dinv41706' => 'din', 'Duzib052G0089' => 'dzi', 'Duzib116G0641' => 'dzi', 'Duzib132G0069' => 'dzi', 'Duzib132G1219' => 'dzi', 'Duzib147G0278' => 'dzi', 'Duzib160G0480' => 'dzi', 'Duzib170G0661' => 'dzi', 'Duzib177G0591' => 'dzi', 'Duzib187G1353' => 'dzi', 'Duzib192G0858' => 'dzi', 'Duzib192G0883' => 'dzi', 'Duzib213G0506' => 'dzi', 'Duzib235G0289' => 'dzi', 'Duzib251G0422' => 'dzi', 'ECA232G3898' => 'eca', 'ECA233G5950' => 'eca', 'ECA234G1699' => 'eca', 'ECA234G2421' => 'eca', 'ECA236G0426' => 'eca', 'ECA236G4331' => 'eca', 'ECA248G2573' => 'eca', 'EL10Ac1g00077' => 'bvu', 'EL10Ac1g01746' => 'bvu', 'EL10Ac2g03464' => 'bvu', 'EL10Ac4g08176' => 'bvu', 'EL10Ac7g17521' => 'bvu', 'EL10Ac8g20386' => 'bvu', 'EL10Ac9g21343' => 'bvu', 'EL10Ac9g22688' => 'bvu', 'Eucgr.B03434' => 'egr', 'Eucgr.D00618' => 'egr', 'Eucgr.E02395' => 'egr', 'Eucgr.F01129' => 'egr', 'Eucgr.F02622' => 'egr', 'Eucgr.F04207' => 'egr', 'FAN01G0570' => 'fan', 'FAN03G3351' => 'fan', 'FAN06G3702' => 'fan', 'FAN07G2149' => 'fan', 'FAN10G3758' => 'fan', 'FAN11G1170' => 'fan', 'FAN11G2050' => 'fan', 'FAN11G2724' => 'fan', 'FAN12G1700' => 'fan', 'FAN12G2028' => 'fan', 'FAN15G1160' => 'fan', 'FAN15G3063' => 'fan', 'FAN16G2540' => 'fan', 'FAN16G3077' => 'fan', 'FAN16G3624' => 'fan', 'FAN17G0221' => 'fan', 'FAN20G2492' => 'fan', 'FAN20G2905' => 'fan', 'FAN21G0548' => 'fan', 'FAN21G1300' => 'fan', 'FAN22G0077' => 'fan', 'FAN22G1315' => 'fan', 'FAN24G1280' => 'fan', 'FAN24G1445' => 'fan', 'FAN24G3527' => 'fan', 'FAN25G0464' => 'fan', 'FAN25G2885' => 'fan', 'FAN25G3270' => 'fan', 'FAN27G1101' => 'fan', 'FAN27G2846' => 'fan', 'FAN27G3524' => 'fan', 'FvH4_2g11770' => 'fve', 'FvH4_2g15630' => 'fve', 'FvH4_3g05570' => 'fve', 'FvH4_3g09110' => 'fve', 'FvH4_3g19940' => 'fve', 'FvH4_4g04821' => 'fve', 'FvH4_4g31480' => 'fve', 'FvH4_7g01740' => 'fve', 'Glyma.05G130400' => 'gma', 'Glyma.05G156400' => 'gma', 'Glyma.07G197000' => 'gma', 'Glyma.08G085151' => 'gma', 'Glyma.08G114500' => 'gma', 'Glyma.08G300400' => 'gma', 'Glyma.10G215800' => 'gma', 'Glyma.12G224400' => 'gma', 'Glyma.13G179300' => 'gma', 'Glyma.13G218151' => 'gma', 'Glyma.13G238800' => 'gma', 'Glyma.13G276900' => 'gma', 'Glyma.14G078200' => 'gma', 'Glyma.15G074500' => 'gma', 'Glyma.15G094100' => 'gma', 'Glyma.17G247200' => 'gma', 'Glyma.18G120100' => 'gma', 'Glyma.20G176000' => 'gma', 'Gohir.A01G063600' => 'ghi', 'Gohir.A01G170301' => 'ghi', 'Gohir.A02G060500' => 'ghi', 'Gohir.A05G133850' => 'ghi', 'Gohir.A05G161400' => 'ghi', 'Gohir.A06G012900' => 'ghi', 'Gohir.A06G035901' => 'ghi', 'Gohir.A06G127100' => 'ghi', 'Gohir.A06G210500' => 'ghi', 'Gohir.A08G008650' => 'ghi', 'Gohir.A09G072700' => 'ghi', 'Gohir.A09G088301' => 'ghi', 'Gohir.A10G040600' => 'ghi', 'Gohir.A12G036300' => 'ghi', 'Gohir.A12G143350' => 'ghi', 'Gohir.A12G165500' => 'ghi', 'Gohir.A13G145700' => 'ghi', 'Gohir.D01G050000' => 'ghi', 'Gohir.D01G051366' => 'ghi', 'Gohir.D01G161350' => 'ghi', 'Gohir.D02G065900' => 'ghi', 'Gohir.D05G164200' => 'ghi', 'Gohir.D05G355500' => 'ghi', 'Gohir.D06G010400' => 'ghi', 'Gohir.D06G111250' => 'ghi', 'Gohir.D06G132000' => 'ghi', 'Gohir.D06G210500' => 'ghi', 'Gohir.D07G165675' => 'ghi', 'Gohir.D08G062240' => 'ghi', 'Gohir.D08G086101' => 'ghi', 'Gohir.D08G138060' => 'ghi', 'Gohir.D09G072300' => 'ghi', 'Gohir.D10G041400' => 'ghi', 'Gohir.D11G191020' => 'ghi', 'Gohir.D11G212066' => 'ghi', 'Gohir.D12G036300' => 'ghi', 'Gohir.D12G168600' => 'ghi', 'Gohir.D13G150600' => 'ghi', 'Gorai.001G057300' => 'gra', 'Gorai.002G069900' => 'gra', 'Gorai.002G200000' => 'gra', 'Gorai.003G067600' => 'gra', 'Gorai.005G074800' => 'gra', 'Gorai.006G087300' => 'gra', 'Gorai.008G037500' => 'gra', 'Gorai.008G181400' => 'gra', 'Gorai.009G169400' => 'gra', 'Gorai.009G387900' => 'gra', 'Gorai.010G013300' => 'gra', 'Gorai.010G153800' => 'gra', 'Gorai.010G255800' => 'gra', 'Gorai.011G043700' => 'gra', 'Gorai.011G198900' => 'gra', 'Gorai.013G168400' => 'gra', 'GSVIVG01005212001' => 'vvi', 'GSVIVG01006163001' => 'vvi', 'GSVIVG01009625001' => 'vvi', 'GSVIVG01014338001' => 'vvi', 'GSVIVG01020005001' => 'vvi', 'GSVIVG01021450001' => 'vvi', 'GSVIVG01023975001' => 'vvi', 'GSVIVG01034490001' => 'vvi', 'HanXRQChr04g0112071' => 'han', 'HanXRQChr05g0131151' => 'han', 'HanXRQChr09g0262371' => 'han', 'HanXRQChr09g0268401' => 'han', 'HanXRQChr10g0279241' => 'han', 'HanXRQChr10g0297961' => 'han', 'HanXRQChr11g0326231' => 'han', 'HanXRQChr11g0328471' => 'han', 'HanXRQChr16g0507941' => 'han', 'HanXRQChr17g0560211' => 'han', 'Haze_02108' => 'cav', 'Haze_02428' => 'cav', 'Haze_05593' => 'cav', 'Haze_06448' => 'cav', 'Haze_09427' => 'cav', 'Haze_12022' => 'cav', 'Haze_17612' => 'cav', 'Haze_17928' => 'cav', 'Hma1.2p1_0032F.1_g019250' => 'hma', 'Hma1.2p1_0163F.1_g072690' => 'hma', 'Hma1.2p1_0265F.1_g106710' => 'hma', 'Hma1.2p1_0286F.1_g113970' => 'hma', 'Hma1.2p1_0363F.1_g136640' => 'hma', 'Hma1.2p1_0584F.1_g183470' => 'hma', 'Hma1.2p1_0885F.1_g232570' => 'hma', 'HPP92_006022' => 'vpl', 'HPP92_007320' => 'vpl', 'HPP92_011521' => 'vpl', 'HPP92_019387' => 'vpl', 'HPP92_024038' => 'vpl', 'Hund05891' => 'sun', 'Hund06450' => 'sun', 'Hund12053' => 'sun', 'Hund16800' => 'sun', 'Hund21222' => 'sun', 'Hund22896' => 'sun', 'Hund23746' => 'sun', 'Hund27083' => 'sun', 'Lalb_Chr02g0141831' => 'lal', 'Lalb_Chr02g0141841' => 'lal', 'Lalb_Chr05g0220411' => 'lal', 'Lalb_Chr06g0162081' => 'lal', 'Lalb_Chr09g0327651' => 'lal', 'Lalb_Chr13g0295051' => 'lal', 'Lalb_Chr15g0086801' => 'lal', 'Lalb_Chr16g0383781' => 'lal', 'Lalb_Chr16g0383791' => 'lal', 'Lalb_Chr18g0055441' => 'lal', 'Lalb_Chr18g0059611' => 'lal', 'Lalb_Chr20g0109661' => 'lal', 'Lalb_Chr20g0109831' => 'lal', 'Lalb_Chr20g0121871' => 'lal', 'Lalb_Chr22g0355361' => 'lal', 'Lalb_Chr25g0286371' => 'lal', 'Lj1A1187G43' => 'lonja', 'Lj1A1205T50' => 'lonja', 'Lj1A800G33' => 'lonja', 'Lj1C1187T7' => 'lonja', 'Lj1C843T11' => 'lonja', 'Lj1g0010940' => 'lja', 'Lj2A288T69' => 'lonja', 'Lj3g0024276' => 'lja', 'Lj4A47T76' => 'lonja', 'Lj4g0005805' => 'lja', 'Lj4g0006097' => 'lja', 'Lj4g0008528' => 'lja', 'Lj4g0024907' => 'lja', 'Lj5g0012472' => 'lja', 'Lj5g0018648' => 'lja', 'Lj6C789G1' => 'lonja', 'Lj6g0004000' => 'lja', 'Lj7A292G67' => 'lonja', 'Lj7A292T64' => 'lonja', 'Lj9A400T58' => 'lonja', 'Lsat_1_v5_gn_1_126181' => 'lsa', 'Lsat_1_v5_gn_4_123041' => 'lsa', 'Lsat_1_v5_gn_4_133620' => 'lsa', 'Lsat_1_v5_gn_4_53221' => 'lsa', 'Lsat_1_v5_gn_4_71961' => 'lsa', 'Lsat_1_v5_gn_7_105241' => 'lsa', 'Lsat_1_v5_gn_7_21361' => 'lsa', 'Lsat_1_v5_gn_7_28860' => 'lsa', 'Lsat_1_v5_gn_7_31260' => 'lsa', 'Lsat_1_v5_gn_8_52801' => 'lsa', 'Manes.02G191400' => 'mes', 'Manes.03G110100' => 'mes', 'Manes.04G071100' => 'mes', 'Manes.05G100500' => 'mes', 'Manes.05G164700' => 'mes', 'Manes.15G087000' => 'mes', 'Manes.15G121500' => 'mes', 'Manes.16G028300' => 'mes', 'Manes.17G046100' => 'mes', 'Manes.17G069800' => 'mes', 'Manes.18G100500' => 'mes', 'Mapoly0002s0109' => 'mpo', 'Mapoly0024s0007' => 'mpo', 'Mapoly0089s0032' => 'mpo', 'MBI04_g42241_MAGBIO' => 'mbi', 'MBI05_g11988_MAGBIO' => 'mbi', 'MBI05_g35452_MAGBIO' => 'mbi', 'MBI07_g30179_MAGBIO' => 'mbi', 'MBI07_g35859_MAGBIO' => 'mbi', 'MBI07_g35860_MAGBIO' => 'mbi', 'MBI07_g37166_MAGBIO' => 'mbi', 'MBI08_g18172_MAGBIO' => 'mbi', 'MBI09_g08441_MAGBIO' => 'mbi', 'MBI13_g01676_MAGBIO' => 'mbi', 'MBI14_g42955_MAGBIO' => 'mbi', 'MBI16_g13161_MAGBIO' => 'mbi', 'MBI17_g27204_MAGBIO' => 'mbi', 'MBI19_g21595_MAGBIO' => 'mbi', 'MD00G1148400' => 'mdo', 'MD02G1301200' => 'mdo', 'MD03G1227800' => 'mdo', 'MD05G1041100' => 'mdo', 'MD05G1124800' => 'mdo', 'MD05G1284000' => 'mdo', 'MD05G1338800' => 'mdo', 'MD05G1338900' => 'mdo', 'MD07G1022800' => 'mdo', 'MD10G1047500' => 'mdo', 'MD10G1127500' => 'mdo', 'MD10G1262300' => 'mdo', 'MD10G1293800' => 'mdo', 'MD16G1074300' => 'mdo', 'Medtr1g021670' => 'mtr', 'Medtr1g096320' => 'mtr', 'Medtr2g013690' => 'mtr', 'Medtr2g019450' => 'mtr', 'Medtr2g085170' => 'mtr', 'Medtr4g088785' => 'mtr', 'Medtr8g055930' => 'mtr', 'Medtr8g085850' => 'mtr', 'MELO3C002605.2' => 'cme', 'MELO3C003891.2' => 'cme', 'MELO3C004012.2' => 'cme', 'MELO3C007134.2' => 'cme', 'MELO3C008118.2' => 'cme', 'MELO3C016700.2' => 'cme', 'MELO3C024127.2' => 'cme', 'MELO3C033361.2' => 'cme', 'MELO3C033362.2' => 'cme', 'Migut.C00430' => 'egut', 'Migut.C01246' => 'egut', 'Migut.E00101' => 'egut', 'Migut.H01486' => 'egut', 'Migut.H01939' => 'egut', 'Migut.K00360' => 'egut', 'Migut.M00910' => 'egut', 'Migut.M01139' => 'egut', 'Migut.N02677' => 'egut', 'MSTRG.13252' => 'ama', 'MSTRG.14701' => 'ama', 'MSTRG.1521' => 'ama', 'MSTRG.15884' => 'ama', 'MSTRG.16242' => 'ama', 'MSTRG.22285' => 'ama', 'MSTRG.22444' => 'ama', 'MSTRG.2349' => 'ama', 'MSTRG.26308' => 'ama', 'MSTRG.28296' => 'ama', 'MSTRG.9895' => 'ama', 'Nitab4.5_0000110g0060' => 'nta', 'Nitab4.5_0000420g0130' => 'nta', 'Nitab4.5_0000422g0030' => 'nta', 'Nitab4.5_0000560g0180' => 'nta', 'Nitab4.5_0000703g0100' => 'nta', 'Nitab4.5_0000786g0200' => 'nta', 'Nitab4.5_0001336g0020' => 'nta', 'Nitab4.5_0001796g0030' => 'nta', 'Nitab4.5_0003348g0060' => 'nta', 'Nitab4.5_0003698g0040' => 'nta', 'Nitab4.5_0003942g0090' => 'nta', 'Nitab4.5_0004775g0070' => 'nta', 'Nitab4.5_0004864g0030' => 'nta', 'Nitab4.5_0005615g0020' => 'nta', 'Nitab4.5_0009288g0030' => 'nta', 'Nitab4.5_0009341g0010' => 'nta', 'Nitab4.5_0009535g0010' => 'nta', 'Nn1g03995' => 'nnu', 'Nn1g04100' => 'nnu', 'Nn1g06530' => 'nnu', 'Nn3g16404' => 'nnu', 'Nn3g17212' => 'nnu', 'Nn3g20776' => 'nnu', 'Nn3g21923' => 'nnu', 'Nn5g27737' => 'nnu', 'Nn5g29461' => 'nnu', 'Nn7g38355' => 'nnu', 'Nn8g39873' => 'nnu', 'Oeu000548.2' => 'oeu', 'Oeu004672.1' => 'oeu', 'Oeu015605.2' => 'oeu', 'Oeu016092.1' => 'oeu', 'Oeu017879.3' => 'oeu', 'Oeu024910.1' => 'oeu', 'Oeu028965.1' => 'oeu', 'Oeu031269.1' => 'oeu', 'Oeu031270.1' => 'oeu', 'Oeu032535.1' => 'oeu', 'Oeu034151.1' => 'oeu', 'Oeu034152.1' => 'oeu', 'Oeu034588.2' => 'oeu', 'Oeu050846.1' => 'oeu', 'Oeu050849.2' => 'oeu', 'Oeu051063.2' => 'oeu', 'Oeu052368.1' => 'oeu', 'Oeu052370.1' => 'oeu', 'Os01g0210400' => 'osa', 'Os01g0304300' => 'osa', 'Os01g0749100' => 'osa', 'Os02g0745800' => 'osa', 'Os03g0769050' => 'osa', 'Os05g0531500' => 'osa', 'Os06g0724300' => 'osa', 'Os11g0198100' => 'osa', 'Peaxi162Scf00069g01425' => 'pax', 'Peaxi162Scf00280g00811' => 'pax', 'Peaxi162Scf00310g00615' => 'pax', 'Peaxi162Scf00362g00542' => 'pax', 'Peaxi162Scf00461g00310' => 'pax', 'Peaxi162Scf00530g00118' => 'pax', 'Peaxi162Scf00541g00057' => 'pax', 'Peaxi162Scf00661g00017' => 'pax', 'Peaxi162Scf00926g00027' => 'pax', 'Peaxi162Scf01064g00263' => 'pax', 'Peaxi162Scf01211g00135' => 'pax', 'PGR004G2336' => 'pgr', 'PGR042G0327' => 'pgr', 'PGR042G1957' => 'pgr', 'PGR042G2003' => 'pgr', 'PGR042G3929' => 'pgr', 'PGR083G1137' => 'pgr', 'PGR083G1364' => 'pgr', 'PGSC0003DMG400003381' => 'stu', 'PGSC0003DMG400003417' => 'stu', 'PGSC0003DMG400008981' => 'stu', 'PGSC0003DMG400012417' => 'stu', 'PGSC0003DMG400012823' => 'stu', 'PGSC0003DMG400016885' => 'stu', 'PGSC0003DMG400022812' => 'stu', 'PGSC0003DMG400029726' => 'stu', 'PGSC0003DMG401009243' => 'stu', 'PGSC0003DMG401031505' => 'stu', 'PGSC0003DMG402031505' => 'stu', 'Phvul.001G017600' => 'pvu', 'Phvul.002G193500' => 'pvu', 'Phvul.002G228900' => 'pvu', 'Phvul.002G236800' => 'pvu', 'Phvul.003G049500' => 'pvu', 'Phvul.005G072000' => 'pvu', 'Phvul.006G164800' => 'pvu', 'Phvul.006G185100' => 'pvu', 'Phvul.007G090000' => 'pvu', 'Potri.001G399800' => 'ptr', 'Potri.002G149900' => 'ptr', 'Potri.004G044100' => 'ptr', 'Potri.004G177600' => 'ptr', 'Potri.009G138000' => 'ptr', 'Potri.010G094000' => 'ptr', 'Potri.011G053000' => 'ptr', 'Potri.011G119300' => 'ptr', 'Potri.013G113700' => 'ptr', 'Potri.018G107800' => 'ptr', 'Potri.019G084100' => 'ptr', 'Pp3c14_23720' => 'ppa', 'Pp3c16_6340' => 'ppa', 'Pp3c23_13420' => 'ppa', 'Pp3c24_2740' => 'ppa', 'Pp3c25_860' => 'ppa', 'Pp3c8_21750' => 'ppa', 'Prupe.1G273000' => 'ppe', 'Prupe.1G273700' => 'ppe', 'Prupe.1G274100' => 'ppe', 'Prupe.2G023300' => 'ppe', 'Prupe.4G048000' => 'ppe', 'Prupe.4G080400' => 'ppe', 'Prupe.4G181200' => 'ppe', 'Prupe.8G056900' => 'ppe', 'Prupe.8G168700' => 'ppe', 'Psat1g189080' => 'psa', 'Psat1g204760' => 'psa', 'Psat4g175560' => 'psa', 'Psat4g177720' => 'psa', 'Psat5g244240' => 'psa', 'Psat6g010720' => 'psa', 'Psat6g187200' => 'psa', 'Psat7g072040' => 'psa', 'PSO017G3501' => 'pso', 'PSO063G2148' => 'pso', 'PSO063G5608' => 'pso', 'PSO210G6392' => 'pso', 'PSO541G2319' => 'pso', 'PSO541G2836' => 'pso', 'PSO541G4012' => 'pso', 'PSO541G6253' => 'pso', 'PSO675G0580' => 'pso', 'PSO675G0856' => 'pso', 'PSO675G5635' => 'pso', 'PSO675G9157' => 'pso', 'PSO832G1660' => 'pso', 'PSO832G1969' => 'pso', 'QL02p007186' => 'qlo', 'QL02p033904' => 'qlo', 'QL03p064391' => 'qlo', 'QL05p040593' => 'qlo', 'QL05p058242' => 'qlo', 'QL08p021825' => 'qlo', 'QL11p004981' => 'qlo', 'RcHm_v2.0_Chr1g0318301' => 'rch', 'RcHm_v2.0_Chr4g0418501' => 'rch', 'RcHm_v2.0_Chr4g0439971' => 'rch', 'RcHm_v2.0_Chr5g0008541' => 'rch', 'RcHm_v2.0_Chr5g0014101' => 'rch', 'RcHm_v2.0_Chr5g0014131' => 'rch', 'RcHm_v2.0_Chr5g0033621' => 'rch', 'RcHm_v2.0_Chr6g0272041' => 'rch', 'RcHm_v2.0_Chr6g0278831' => 'rch', 'Rhsim02G0130400' => 'rsi', 'Rhsim02G0171100' => 'rsi', 'Rhsim05G0053000' => 'rsi', 'Rhsim05G0053100' => 'rsi', 'Rhsim06G0096500' => 'rsi', 'Rhsim06G0096600' => 'rsi', 'Rhsim06G0199100' => 'rsi', 'Rhsim12G0062300' => 'rsi', 'Rhsim12G0062800' => 'rsi', 'Sabra02G0118600' => 'sbr', 'Sabra04G0027300' => 'sbr', 'Sabra04G0119500' => 'sbr', 'Sabra08G0112500' => 'sbr', 'Sabra11G0036800' => 'sbr', 'Sabra11G0103800' => 'sbr', 'Sabra13G0096300' => 'sbr', 'Sabra16G0262300' => 'sbr', 'Sabra18G0091700' => 'sbr', 'Sabra19G0095400' => 'sbr', 'SalBow6G3080' => 'sbo', 'SalBow7G1157' => 'sbo', 'SalBow7G2123' => 'sbo', 'SalBow7G2285' => 'sbo', 'SalBow7G3537' => 'sbo', 'SalBow8G2947' => 'sbo', 'SalBow8G4463' => 'sbo', 'SalBow8G5466' => 'sbo', 'Sc01g0001750' => 'sci', 'Sc02g0006640' => 'sci', 'Sc02g0006670' => 'sci', 'Sc04g0008220' => 'sci', 'Sc05g0006190' => 'sci', 'Sc08g0002760' => 'sci', 'Sc17g0006170' => 'sci', 'Sc22g0002050' => 'sci', 'Sc23g0001190' => 'sci', 'Sc24g0000980' => 'sci', 'Sed0006245' => 'sed', 'Sed0007543' => 'sed', 'Sed0009411' => 'sed', 'Sed0010765' => 'sed', 'Sed0012944' => 'sed', 'Sed0014682' => 'sed', 'Sed0016174' => 'sed', 'Sed0016796' => 'sed', 'Sed0020317' => 'sed', 'Sed0021467' => 'sed', 'SEGI_01316' => 'sgi', 'SEGI_03374' => 'sgi', 'SEGI_16265' => 'sgi', 'SEGI_18569' => 'sgi', 'SEGI_20351' => 'sgi', 'SEGI_26395' => 'sgi', 'SEGI_29469' => 'sgi', 'SEGI_34771' => 'sgi', 'SEGI_36769' => 'sgi', 'SEGI_37139' => 'sgi', 'SGA_v2.0_scaffold100G29687' => 'sas', 'SGA_v2.0_scaffold118G32472' => 'sas', 'SGA_v2.0_scaffold14G07051' => 'sas', 'SGA_v2.0_scaffold183G39845' => 'sas', 'SGA_v2.0_scaffold1G00174' => 'sas', 'SGA_v2.0_scaffold22G09714' => 'sas', 'SGA_v2.0_scaffold333G48992' => 'sas', 'SGA_v2.0_scaffold46G17491' => 'sas', 'SGA_v2.0_scaffold49G18294' => 'sas', 'SGA_v2.0_scaffold63G21658' => 'sas', 'SHI01741' => 'shi', 'SHI05771' => 'shi', 'SHI18077' => 'shi', 'SHI20525' => 'shi', 'SHI20527' => 'shi', 'SHI20528' => 'shi', 'SMO172G0185' => 'smo', 'SMO198G0020' => 'smo', 'SMO351G0006' => 'smo', 'SMO356G0118' => 'smo', 'SMO358G0296' => 'smo', 'SMO367G0079' => 'smo', 'SMO367G1277' => 'smo', 'Solyc01g014220.3' => 'sly', 'Solyc01g111770.2' => 'sly', 'Solyc02g078180.3' => 'sly', 'Solyc03g006430.3' => 'sly', 'Solyc03g006456.1' => 'sly', 'Solyc03g079860.2' => 'sly', 'Solyc04g079770.3' => 'sly', 'Solyc05g007430.4' => 'sly', 'Solyc07g063150.3' => 'sly', 'Solyc08g016620.3' => 'sly', 'Solyc09g057590.3' => 'sly', 'Solyc09g057600.1' => 'sly', 'Solyc10g009050.3' => 'sly', 'Solyc11g017420.2' => 'sly', 'Sopen01g053810' => 'spe', 'Sopen02g023040' => 'spe', 'Sopen03g002440' => 'spe', 'Sopen04g033350' => 'spe', 'Sopen05g003310' => 'spe', 'Sopen07g004050' => 'spe', 'Sopen07g031340' => 'spe', 'Sopen08g006990' => 'spe', 'Sopen10g004830' => 'spe', 'Sopen11g009370' => 'spe', 'Sp1g24450' => 'spa', 'Sp1g29670' => 'spa', 'Sp1g39600' => 'spa', 'Sp2g11080' => 'spa', 'Sp2g13970' => 'spa', 'Sp4g16130' => 'spa', 'Sp6g13080' => 'spa', 'Sp7g37270' => 'spa', 'TAR371G0065' => 'tar', 'TAR376G0340' => 'tar', 'TAR376G0435' => 'tar', 'TAR381G0002' => 'tar', 'TAR381G1236' => 'tar', 'TAR624G0055' => 'tar', 'TAR624G0324' => 'tar', 'TAR624G0696' => 'tar', 'TAR624G0906' => 'tar', 'TAR625G0107' => 'tar', 'TAR626G0015' => 'tar', 'TAR626G1356' => 'tar', 'TAR627G0888' => 'tar', 'TAR628G0399' => 'tar', 'TAR628G1327' => 'tar', 'TAR629G2831' => 'tar', 'TAR629G2874' => 'tar', 'TAR633G1432' => 'tar', 'TAR633G2771' => 'tar', 'THA.LOC104803394' => 'tha', 'THA.LOC104805153' => 'tha', 'THA.LOC104806784' => 'tha', 'THA.LOC104810473' => 'tha', 'THA.LOC104813100' => 'tha', 'THA.LOC104814215' => 'tha', 'THA.LOC104815554' => 'tha', 'THA.LOC104820544' => 'tha', 'THA.LOC104824754' => 'tha', 'THA.LOC104827717' => 'tha', 'Thecc.02G031400' => 'tca', 'Thecc.02G055900' => 'tca', 'Thecc.02G350800' => 'tca', 'Thecc.06G150900' => 'tca', 'Thecc.06G186600' => 'tca', 'Thecc.07G089600' => 'tca', 'Thecc.08G020400' => 'tca', 'Thecc.08G182100' => 'tca', 'Thhalv10000873m.g' => 'esa', 'Thhalv10004185m.g' => 'esa', 'Thhalv10006981m.g' => 'esa', 'Thhalv10007204m.g' => 'esa', 'Thhalv10011374m.g' => 'esa', 'Thhalv10013482m.g' => 'esa', 'Thhalv10017801m.g' => 'esa', 'Thhalv10024983m.g' => 'esa', 'TPR.G12072' => 'tpr', 'TPR.G15769' => 'tpr', 'TPR.G16504' => 'tpr', 'TPR.G16506' => 'tpr', 'TPR.G24345' => 'tpr', 'TPR.G26666' => 'tpr', 'TPR.G27320' => 'tpr', 'TPR.G31819' => 'tpr', 'TPR.G38879' => 'tpr', 'TPR.G39015' => 'tpr', 'TPR.G8819' => 'tpr', 'TWI09G0924' => 'twi', 'TWI12G0811' => 'twi', 'TWI12G1294' => 'twi', 'TWI31G0150' => 'twi', 'TWI36G1262' => 'twi', 'TWI38G1287' => 'twi', 'TWI38G1633' => 'twi', 'TWI38G1982' => 'twi', 'TWI39G0116' => 'twi', 'TWI60G1011' => 'twi', 'TWI63G0171' => 'twi', 'TWI73G0839' => 'twi', 'TWI79G1511' => 'twi', 'unitig_0.g915' => 'ugi', 'unitig_0.g916' => 'ugi', 'unitig_21.g20219' => 'ugi', 'unitig_21.g20416' => 'ugi', 'unitig_578.g16132' => 'ugi', 'unitig_578.g16718' => 'ugi', 'unitig_62.g23481' => 'ugi', 'unitig_744.g24535' => 'ugi', 'unitig_749.g13525' => 'ugi', 'vmacro01248' => 'vma', 'vmacro02290' => 'vma', 'vmacro10946' => 'vma', 'vmacro11865' => 'vma', 'vmacro12493' => 'vma', 'vmacro17322' => 'vma', 'vmacro21599' => 'vma', 'vmacro23041' => 'vma', 'VMungo0251G0004' => 'vmu', 'VMungo0251G2639' => 'vmu', 'VMungo0251G2967' => 'vmu', 'VMungo0540G0864' => 'vmu', 'VMungo0540G1569' => 'vmu', 'VMungo0647G0317' => 'vmu', 'VMungo0720G1373' => 'vmu', 'VMungo0720G1508' => 'vmu', 'VMungo1080G0485' => 'vmu', 'VMungo1215G3177' => 'vmu', 'Zm00001eb112600' => 'zma', 'Zm00001eb120220' => 'zma', 'Zm00001eb153240' => 'zma', 'Zm00001eb168880' => 'zma', 'Zm00001eb213920' => 'zma', 'Zm00001eb228280' => 'zma', 'Zm00001eb254580' => 'zma', 'Zm00001eb272180' => 'zma', 'Zm00001eb293190' => 'zma', 'Zm00001eb322930' => 'zma', 'Zm00001eb353360' => 'zma', 'Zm00001eb353390' => 'zma', 'Zm00001eb353430' => 'zma', 'Zm00001eb353440' => 'zma', 'Zm00001eb353780' => 'zma' ), 'gf_id' => 'HOM05D000499', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000499' ), 'data_identifier' => 'HOM05D000499', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000499', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1066', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p29780' => 'bna', 'A02p33180' => 'bna', 'A03p16470' => 'bna', 'A03p66010' => 'bna', 'A04p25970' => 'bna', 'A06p01270' => 'bna', 'A06p46080' => 'bna', 'A07p11400' => 'bna', 'A08p01840' => 'bna', 'A08p08230' => 'bna', 'A08p25740' => 'bna', 'A09p32070' => 'bna', 'A09p37830' => 'bna', 'A09p42840' => 'bna', 'A09p42850' => 'bna', 'Aa31LG10G2060' => 'aar', 'Aa31LG2G7410' => 'aar', 'Aa31LG6G10200' => 'aar', 'Aa31LG6G16680' => 'aar', 'Aa31LG6G8470' => 'aar', 'Aa31LG9G12730' => 'aar', 'Aa31LG9G13680' => 'aar', 'Aa31LG9G14920' => 'aar', 'Aa31LG9G6650' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4977' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5467' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3254' => 'aag', 'Actinidia02578' => 'ach', 'Actinidia07693' => 'ach', 'Actinidia08413' => 'ach', 'Actinidia08414' => 'ach', 'Actinidia15289' => 'ach', 'Actinidia19871' => 'ach', 'Actinidia21475' => 'ach', 'Actinidia22576' => 'ach', 'Actinidia28327' => 'ach', 'Actinidia32491' => 'ach', 'Actinidia39463' => 'ach', 'Actinidia39571' => 'ach', 'Ah.01g013750' => 'amhyb', 'Ah.01g023210' => 'amhyb', 'Ah.04g164850' => 'amhyb', 'Ah.05g178060' => 'amhyb', 'Ah.07g204270' => 'amhyb', 'Ah.07g208480' => 'amhyb', 'Ah.09g237410' => 'amhyb', 'Ah.14g089460' => 'amhyb', 'AL1G41790' => 'aly', 'AL1G49050' => 'aly', 'AL1G53810' => 'aly', 'AL1G61400' => 'aly', 'AL4G18580' => 'aly', 'AL5G12510' => 'aly', 'AL5G12540' => 'aly', 'AL6G43230' => 'aly', 'AL7G10370' => 'aly', 'AL7G19250' => 'aly', 'AL8G12240' => 'aly', 'AL8G18540' => 'aly', 'Aqoxy1G02409' => 'aox', 'Aqoxy2G03993' => 'aox', 'Aqoxy3G03357' => 'aox', 'Aqoxy4G00785' => 'aox', 'Aqoxy5G02598' => 'aox', 'Aqoxy6G00132' => 'aox', 'Aqoxy7G01776' => 'aox', 'Aqoxy7G02316' => 'aox', 'Aqoxy7G03973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.12AFKW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B8730' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27IQR1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3F75VG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3RE0GA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41TCQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.527VTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FIR39' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5W8UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DA38EV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ63HS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H1I32C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HC27T5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4M8AP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7N3CZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9UVDZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LS1NQA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT1D4B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SKC4TM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCFV76' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF9Q1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQWD9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1ZM88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WE07RT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YCK7VH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJE6Q6' => 'arhy', 'AT1G28240' => 'ath', 'AT1G34550' => 'ath', 'AT1G53040' => 'ath', 'AT2G02910' => 'ath', 'AT4G09630' => 'ath', 'AT4G38500' => 'ath', 'AT5G42660' => 'ath', 'AT5G46220' => 'ath', 'ATR0152G026' => 'atr', 'ATR0564G343' => 'atr', 'ATR0706G151' => 'atr', 'ATR0733G207' => 'atr', 'ATR0751G234' => 'atr', 'ATR0807G048' => 'atr', 'ATR1091G084' => 'atr', 'Atru.chr10.1229' => 'acertr', 'Atru.chr10.1230' => 'acertr', 'Atru.chr10.1874' => 'acertr', 'Atru.chr11.1808' => 'acertr', 'Atru.chr13.1795' => 'acertr', 'Atru.chr13.570' => 'acertr', 'Atru.chr2.2608' => 'acertr', 'Atru.chr2.2609' => 'acertr', 'Atru.chr5.3428' => 'acertr', 'Atru.chr8.1171' => 'acertr', 'AUR62004651' => 'cqu', 'AUR62008675' => 'cqu', 'AUR62010014' => 'cqu', 'AUR62013004' => 'cqu', 'AUR62014825' => 'cqu', 'AUR62015015' => 'cqu', 'AUR62015151' => 'cqu', 'AUR62017020' => 'cqu', 'AUR62019422' => 'cqu', 'AUR62023570' => 'cqu', 'AUR62025571' => 'cqu', 'AUR62029098' => 'cqu', 'AUR62033863' => 'cqu', 'AUR62034296' => 'cqu', 'AUR62040075' => 'cqu', 'BcaB02g07334' => 'bca', 'BcaB02g10575' => 'bca', 'BcaB03g12119' => 'bca', 'BcaB03g12120' => 'bca', 'BcaB03g13945' => 'bca', 'BcaB04g17123' => 'bca', 'BcaB04g17867' => 'bca', 'BcaB04g19839' => 'bca', 'BcaB07g30317' => 'bca', 'BcaB07g32432' => 'bca', 'BcaB07g33362' => 'bca', 'BcaB08g36611' => 'bca', 'BcaC01g00028' => 'bca', 'BcaC01g01356' => 'bca', 'BcaC01g02034' => 'bca', 'BcaC01g06051' => 'bca', 'BcaC03g16839' => 'bca', 'BcaC03g17176' => 'bca', 'BcaC05g26829' => 'bca', 'BcaC06g31490' => 'bca', 'BcaC06g35344' => 'bca', 'BcaC06g36570' => 'bca', 'BcaC07g37537' => 'bca', 'BcaC08g43491' => 'bca', 'BcaC08g43773' => 'bca', 'BcaNung00234' => 'bca', 'BcaNung01982' => 'bca', 'BcaNung03707' => 'bca', 'BcaNung06454' => 'bca', 'BolC2t10762H' => 'bol', 'BolC2t11191H' => 'bol', 'BolC3t14322H' => 'bol', 'BolC3t19747H' => 'bol', 'BolC3t21425H' => 'bol', 'BolC4t27800H' => 'bol', 'BolC5t31423H' => 'bol', 'BolC6t35951H' => 'bol', 'BolC6t36282H' => 'bol', 'BolC7t40678H' => 'bol', 'BolC7t40679H' => 'bol', 'BolC7t42222H' => 'bol', 'BolC7t43492H' => 'bol', 'BolC7t46785H' => 'bol', 'BolC8t47853H' => 'bol', 'BolC9t56805H' => 'bol', 'BraA02t08000Z' => 'bra', 'BraA02t08341Z' => 'bra', 'BraA03t10936Z' => 'bra', 'BraA03t15657Z' => 'bra', 'BraA04t18100Z' => 'bra', 'BraA05t20523Z' => 'bra', 'BraA06t23353Z' => 'bra', 'BraA06t27473Z' => 'bra', 'BraA06t27769Z' => 'bra', 'BraA07t28928Z' => 'bra', 'BraA08t32236Z' => 'bra', 'BraA08t32841Z' => 'bra', 'BraA08t34524Z' => 'bra', 'BraA09t38742Z' => 'bra', 'BraA09t39295Z' => 'bra', 'C02p47180' => 'bna', 'C02p50990' => 'bna', 'C03p19360' => 'bna', 'C03p74950' => 'bna', 'C03p91000' => 'bna', 'C04p63260' => 'bna', 'C05p27050' => 'bna', 'C06p08750' => 'bna', 'C06p11490' => 'bna', 'C07p02820' => 'bna', 'C07p17180' => 'bna', 'C07p29440' => 'bna', 'C07p63730' => 'bna', 'C09p39260' => 'bna', 'CAN.G1164.34' => 'can', 'CAN.G1164.39' => 'can', 'CAN.G1530.3' => 'can', 'CAN.G162.61' => 'can', 'CAN.G176.6' => 'can', 'CAN.G289.49' => 'can', 'CAN.G370.21' => 'can', 'CAN.G370.22' => 'can', 'CAN.G371.117' => 'can', 'CAN.G58.37' => 'can', 'CAN.G588.98' => 'can', 'CANSAT21G2266' => 'cansat', 'CANSAT25G2799' => 'cansat', 'CANSAT35G0862' => 'cansat', 'CANSAT35G1704' => 'cansat', 'CANSAT35G1760' => 'cansat', 'CANSAT56G3971' => 'cansat', 'CANSAT56G4116' => 'cansat', 'CANSAT80G1259' => 'cansat', 'CARHR027730' => 'chi', 'CARHR033880' => 'chi', 'CARHR043270' => 'chi', 'CARHR145330' => 'chi', 'CARHR145340' => 'chi', 'CARHR175570' => 'chi', 'CARHR181570' => 'chi', 'CARHR258470' => 'chi', 'CARHR260490' => 'chi', 'CARHR294220' => 'chi', 'Carub.0001s2668' => 'cru', 'Carub.0001s3257' => 'cru', 'Carub.0001s4220' => 'cru', 'Carub.0005s0179' => 'cru', 'Carub.0006s2807' => 'cru', 'Carub.0007s0039' => 'cru', 'Carub.0008s0169' => 'cru', 'Carub.0008s0636' => 'cru', 'Ca_00338_v3' => 'car', 'Ca_00542_v3' => 'car', 'Ca_01844_v3' => 'car', 'Ca_10611_v3' => 'car', 'Ca_13326_v3' => 'car', 'Ca_17944_v3' => 'car', 'Ca_18546_v3' => 'car', 'Ca_24219_v3' => 'car', 'Ca_29972_v3' => 'car', 'CBR_g3681' => 'cbr', 'CBR_g40021' => 'cbr', 'Cc01_g08140' => 'ccan', 'Cc02_g13410' => 'ccan', 'Cc02_g37480' => 'ccan', 'Cc05_g12030' => 'ccan', 'Cc09_g03370' => 'ccan', 'Cc09_g10300' => 'ccan', 'Cc10_g03530' => 'ccan', 'Cc10_g11380' => 'ccan', 'CDE01G0176' => 'cde', 'CDE02G0675' => 'cde', 'CDE02G0942' => 'cde', 'CDE02G1153' => 'cde', 'CDE02G4177' => 'cde', 'CDE04G2117' => 'cde', 'CDE04G2736' => 'cde', 'CDE08G1161' => 'cde', 'CDE09G1238' => 'cde', 'Cfa000467' => 'cfa', 'Cfa000947' => 'cfa', 'Cfa004969' => 'cfa', 'Cfa005284' => 'cfa', 'Cfa008993' => 'cfa', 'Cfa018187' => 'cfa', 'Cfa018454' => 'cfa', 'Cfa020585' => 'cfa', 'Ciclev10000424m.g' => 'ccl', 'Ciclev10003605m.g' => 'ccl', 'Ciclev10007828m.g' => 'ccl', 'Ciclev10014620m.g' => 'ccl', 'Ciclev10015169m.g' => 'ccl', 'Ciclev10018291m.g' => 'ccl', 'Ciclev10028256m.g' => 'ccl', 'Ciclev10033822m.g' => 'ccl', 'CiPaw.05G060300' => 'cil', 'CiPaw.05G085000' => 'cil', 'CiPaw.06G083700' => 'cil', 'CiPaw.06G120300' => 'cil', 'CiPaw.09G060500' => 'cil', 'CiPaw.09G123800' => 'cil', 'CiPaw.11G169700' => 'cil', 'CiPaw.12G118300' => 'cil', 'CiPaw.15G071000' => 'cil', 'CiPaw.15G081900' => 'cil', 'ClCG01G024610' => 'cla', 'ClCG03G006070' => 'cla', 'ClCG05G019250' => 'cla', 'ClCG09G009500' => 'cla', 'ClCG11G008200' => 'cla', 'ClCG11G018080' => 'cla', 'COL.COLO4_17373' => 'col', 'COL.COLO4_22994' => 'col', 'COL.COLO4_26389' => 'col', 'COL.COLO4_27170' => 'col', 'COL.COLO4_31074' => 'col', 'COL.COLO4_31465' => 'col', 'COL.COLO4_36438' => 'col', 'COL.COLO4_36439' => 'col', 'Cpa.g.c38781' => 'cpa', 'Cpa.g.sc128.12' => 'cpa', 'Cpa.g.sc166.7' => 'cpa', 'Cpa.g.sc166.8' => 'cpa', 'Cpa.g.sc20.111' => 'cpa', 'Cpa.g.sc27.31' => 'cpa', 'Cpa.g.sc64.36' => 'cpa', 'Cpa.g.sc64.37' => 'cpa', 'Cpa.g.sc66.49' => 'cpa', 'Cpa.g.sc80.64' => 'cpa', 'CsaV3_1G012320' => 'csa', 'CsaV3_2G008480' => 'csa', 'CsaV3_2G033450' => 'csa', 'CsaV3_3G044830' => 'csa', 'CsaV3_4G033710' => 'csa', 'CsaV3_6G051730' => 'csa', 'CsaV3_7G025350' => 'csa', 'CSS0001067' => 'camsi', 'CSS0005996' => 'camsi', 'CSS0006590' => 'camsi', 'CSS0009673' => 'camsi', 'CSS0010201' => 'camsi', 'CSS0010549' => 'camsi', 'CSS0011364' => 'camsi', 'CSS0014473' => 'camsi', 'CSS0014961' => 'camsi', 'CSS0020191' => 'camsi', 'CSS0021165' => 'camsi', 'CSS0022306' => 'camsi', 'CSS0030591' => 'camsi', 'CSS0030696' => 'camsi', 'CSS0032653' => 'camsi', 'CSS0037487' => 'camsi', 'CSS0041102' => 'camsi', 'CSS0041261' => 'camsi', 'CSS0046246' => 'camsi', 'CSS0049256' => 'camsi', 'DCAR_004075' => 'dca', 'DCAR_011538' => 'dca', 'DCAR_019553' => 'dca', 'DCAR_020952' => 'dca', 'DCAR_021739' => 'dca', 'DCAR_027407' => 'dca', 'DCAR_027913' => 'dca', 'DCAR_028066' => 'dca', 'Dinv05899' => 'din', 'Dinv07563' => 'din', 'Dinv08010' => 'din', 'Dinv14125' => 'din', 'Dinv20172' => 'din', 'Dinv30743' => 'din', 'Dinv31229' => 'din', 'Dinv34162' => 'din', 'Dinv36028' => 'din', 'Dinv39368' => 'din', 'Dinv40565' => 'din', 'Dinv41706' => 'din', 'Duzib052G0089' => 'dzi', 'Duzib116G0641' => 'dzi', 'Duzib132G0069' => 'dzi', 'Duzib132G1219' => 'dzi', 'Duzib147G0278' => 'dzi', 'Duzib160G0480' => 'dzi', 'Duzib170G0661' => 'dzi', 'Duzib177G0591' => 'dzi', 'Duzib187G1353' => 'dzi', 'Duzib192G0858' => 'dzi', 'Duzib192G0883' => 'dzi', 'Duzib213G0506' => 'dzi', 'Duzib235G0289' => 'dzi', 'Duzib251G0422' => 'dzi', 'ECA232G3898' => 'eca', 'ECA233G5950' => 'eca', 'ECA234G1699' => 'eca', 'ECA234G2421' => 'eca', 'ECA236G0426' => 'eca', 'ECA236G4331' => 'eca', 'ECA248G2573' => 'eca', 'EL10Ac1g00077' => 'bvu', 'EL10Ac1g01746' => 'bvu', 'EL10Ac2g03464' => 'bvu', 'EL10Ac4g08176' => 'bvu', 'EL10Ac7g17521' => 'bvu', 'EL10Ac8g20386' => 'bvu', 'EL10Ac9g21343' => 'bvu', 'EL10Ac9g22688' => 'bvu', 'Eucgr.B03434' => 'egr', 'Eucgr.D00618' => 'egr', 'Eucgr.E02395' => 'egr', 'Eucgr.F01129' => 'egr', 'Eucgr.F02622' => 'egr', 'Eucgr.F04207' => 'egr', 'FAN01G0570' => 'fan', 'FAN03G3351' => 'fan', 'FAN06G3702' => 'fan', 'FAN07G2149' => 'fan', 'FAN10G3758' => 'fan', 'FAN11G1170' => 'fan', 'FAN11G2050' => 'fan', 'FAN11G2724' => 'fan', 'FAN12G1700' => 'fan', 'FAN12G2028' => 'fan', 'FAN15G1160' => 'fan', 'FAN15G3063' => 'fan', 'FAN16G2540' => 'fan', 'FAN16G3077' => 'fan', 'FAN16G3624' => 'fan', 'FAN17G0221' => 'fan', 'FAN20G2492' => 'fan', 'FAN20G2905' => 'fan', 'FAN21G0548' => 'fan', 'FAN21G1300' => 'fan', 'FAN22G0077' => 'fan', 'FAN22G1315' => 'fan', 'FAN24G1280' => 'fan', 'FAN24G1445' => 'fan', 'FAN24G3527' => 'fan', 'FAN25G0464' => 'fan', 'FAN25G2885' => 'fan', 'FAN25G3270' => 'fan', 'FAN27G1101' => 'fan', 'FAN27G2846' => 'fan', 'FAN27G3524' => 'fan', 'FvH4_2g11770' => 'fve', 'FvH4_2g15630' => 'fve', 'FvH4_3g05570' => 'fve', 'FvH4_3g09110' => 'fve', 'FvH4_3g19940' => 'fve', 'FvH4_4g04821' => 'fve', 'FvH4_4g31480' => 'fve', 'FvH4_7g01740' => 'fve', 'Glyma.05G130400' => 'gma', 'Glyma.05G156400' => 'gma', 'Glyma.07G197000' => 'gma', 'Glyma.08G085151' => 'gma', 'Glyma.08G114500' => 'gma', 'Glyma.08G300400' => 'gma', 'Glyma.10G215800' => 'gma', 'Glyma.12G224400' => 'gma', 'Glyma.13G179300' => 'gma', 'Glyma.13G218151' => 'gma', 'Glyma.13G238800' => 'gma', 'Glyma.13G276900' => 'gma', 'Glyma.14G078200' => 'gma', 'Glyma.15G074500' => 'gma', 'Glyma.15G094100' => 'gma', 'Glyma.17G247200' => 'gma', 'Glyma.18G120100' => 'gma', 'Glyma.20G176000' => 'gma', 'Gohir.A01G063600' => 'ghi', 'Gohir.A01G170301' => 'ghi', 'Gohir.A02G060500' => 'ghi', 'Gohir.A05G133850' => 'ghi', 'Gohir.A05G161400' => 'ghi', 'Gohir.A06G012900' => 'ghi', 'Gohir.A06G035901' => 'ghi', 'Gohir.A06G127100' => 'ghi', 'Gohir.A06G210500' => 'ghi', 'Gohir.A08G008650' => 'ghi', 'Gohir.A09G072700' => 'ghi', 'Gohir.A09G088301' => 'ghi', 'Gohir.A10G040600' => 'ghi', 'Gohir.A12G036300' => 'ghi', 'Gohir.A12G143350' => 'ghi', 'Gohir.A12G165500' => 'ghi', 'Gohir.A13G145700' => 'ghi', 'Gohir.D01G050000' => 'ghi', 'Gohir.D01G051366' => 'ghi', 'Gohir.D01G161350' => 'ghi', 'Gohir.D02G065900' => 'ghi', 'Gohir.D05G164200' => 'ghi', 'Gohir.D05G355500' => 'ghi', 'Gohir.D06G010400' => 'ghi', 'Gohir.D06G111250' => 'ghi', 'Gohir.D06G132000' => 'ghi', 'Gohir.D06G210500' => 'ghi', 'Gohir.D07G165675' => 'ghi', 'Gohir.D08G062240' => 'ghi', 'Gohir.D08G086101' => 'ghi', 'Gohir.D08G138060' => 'ghi', 'Gohir.D09G072300' => 'ghi', 'Gohir.D10G041400' => 'ghi', 'Gohir.D11G191020' => 'ghi', 'Gohir.D11G212066' => 'ghi', 'Gohir.D12G036300' => 'ghi', 'Gohir.D12G168600' => 'ghi', 'Gohir.D13G150600' => 'ghi', 'Gorai.001G057300' => 'gra', 'Gorai.002G069900' => 'gra', 'Gorai.002G200000' => 'gra', 'Gorai.003G067600' => 'gra', 'Gorai.005G074800' => 'gra', 'Gorai.006G087300' => 'gra', 'Gorai.008G037500' => 'gra', 'Gorai.008G181400' => 'gra', 'Gorai.009G169400' => 'gra', 'Gorai.009G387900' => 'gra', 'Gorai.010G013300' => 'gra', 'Gorai.010G153800' => 'gra', 'Gorai.010G255800' => 'gra', 'Gorai.011G043700' => 'gra', 'Gorai.011G198900' => 'gra', 'Gorai.013G168400' => 'gra', 'GSVIVG01005212001' => 'vvi', 'GSVIVG01006163001' => 'vvi', 'GSVIVG01009625001' => 'vvi', 'GSVIVG01014338001' => 'vvi', 'GSVIVG01020005001' => 'vvi', 'GSVIVG01021450001' => 'vvi', 'GSVIVG01023975001' => 'vvi', 'GSVIVG01034490001' => 'vvi', 'HanXRQChr04g0112071' => 'han', 'HanXRQChr05g0131151' => 'han', 'HanXRQChr09g0262371' => 'han', 'HanXRQChr09g0268401' => 'han', 'HanXRQChr10g0279241' => 'han', 'HanXRQChr10g0297961' => 'han', 'HanXRQChr11g0326231' => 'han', 'HanXRQChr11g0328471' => 'han', 'HanXRQChr16g0507941' => 'han', 'HanXRQChr17g0560211' => 'han', 'Haze_02108' => 'cav', 'Haze_02428' => 'cav', 'Haze_05593' => 'cav', 'Haze_06448' => 'cav', 'Haze_09427' => 'cav', 'Haze_12022' => 'cav', 'Haze_17612' => 'cav', 'Haze_17928' => 'cav', 'Hma1.2p1_0032F.1_g019250' => 'hma', 'Hma1.2p1_0163F.1_g072690' => 'hma', 'Hma1.2p1_0265F.1_g106710' => 'hma', 'Hma1.2p1_0286F.1_g113970' => 'hma', 'Hma1.2p1_0363F.1_g136640' => 'hma', 'Hma1.2p1_0584F.1_g183470' => 'hma', 'Hma1.2p1_0885F.1_g232570' => 'hma', 'HPP92_006022' => 'vpl', 'HPP92_007320' => 'vpl', 'HPP92_011521' => 'vpl', 'HPP92_019387' => 'vpl', 'HPP92_024038' => 'vpl', 'Hund05891' => 'sun', 'Hund06450' => 'sun', 'Hund12053' => 'sun', 'Hund16800' => 'sun', 'Hund21222' => 'sun', 'Hund22896' => 'sun', 'Hund23746' => 'sun', 'Hund27083' => 'sun', 'Lalb_Chr02g0141831' => 'lal', 'Lalb_Chr02g0141841' => 'lal', 'Lalb_Chr05g0220411' => 'lal', 'Lalb_Chr06g0162081' => 'lal', 'Lalb_Chr09g0327651' => 'lal', 'Lalb_Chr13g0295051' => 'lal', 'Lalb_Chr15g0086801' => 'lal', 'Lalb_Chr16g0383781' => 'lal', 'Lalb_Chr16g0383791' => 'lal', 'Lalb_Chr18g0055441' => 'lal', 'Lalb_Chr18g0059611' => 'lal', 'Lalb_Chr20g0109661' => 'lal', 'Lalb_Chr20g0109831' => 'lal', 'Lalb_Chr20g0121871' => 'lal', 'Lalb_Chr22g0355361' => 'lal', 'Lalb_Chr25g0286371' => 'lal', 'Lj1A1187G43' => 'lonja', 'Lj1A1205T50' => 'lonja', 'Lj1A800G33' => 'lonja', 'Lj1C1187T7' => 'lonja', 'Lj1C843T11' => 'lonja', 'Lj1g0010940' => 'lja', 'Lj2A288T69' => 'lonja', 'Lj3g0024276' => 'lja', 'Lj4A47T76' => 'lonja', 'Lj4g0005805' => 'lja', 'Lj4g0006097' => 'lja', 'Lj4g0008528' => 'lja', 'Lj4g0024907' => 'lja', 'Lj5g0012472' => 'lja', 'Lj5g0018648' => 'lja', 'Lj6C789G1' => 'lonja', 'Lj6g0004000' => 'lja', 'Lj7A292G67' => 'lonja', 'Lj7A292T64' => 'lonja', 'Lj9A400T58' => 'lonja', 'Lsat_1_v5_gn_1_126181' => 'lsa', 'Lsat_1_v5_gn_4_123041' => 'lsa', 'Lsat_1_v5_gn_4_133620' => 'lsa', 'Lsat_1_v5_gn_4_53221' => 'lsa', 'Lsat_1_v5_gn_4_71961' => 'lsa', 'Lsat_1_v5_gn_7_105241' => 'lsa', 'Lsat_1_v5_gn_7_21361' => 'lsa', 'Lsat_1_v5_gn_7_28860' => 'lsa', 'Lsat_1_v5_gn_7_31260' => 'lsa', 'Lsat_1_v5_gn_8_52801' => 'lsa', 'Manes.02G191400' => 'mes', 'Manes.03G110100' => 'mes', 'Manes.04G071100' => 'mes', 'Manes.05G100500' => 'mes', 'Manes.05G164700' => 'mes', 'Manes.15G087000' => 'mes', 'Manes.15G121500' => 'mes', 'Manes.16G028300' => 'mes', 'Manes.17G046100' => 'mes', 'Manes.17G069800' => 'mes', 'Manes.18G100500' => 'mes', 'Mapoly0002s0109' => 'mpo', 'Mapoly0024s0007' => 'mpo', 'Mapoly0089s0032' => 'mpo', 'MBI04_g42241_MAGBIO' => 'mbi', 'MBI05_g11988_MAGBIO' => 'mbi', 'MBI05_g35452_MAGBIO' => 'mbi', 'MBI07_g30179_MAGBIO' => 'mbi', 'MBI07_g35859_MAGBIO' => 'mbi', 'MBI07_g35860_MAGBIO' => 'mbi', 'MBI07_g37166_MAGBIO' => 'mbi', 'MBI08_g18172_MAGBIO' => 'mbi', 'MBI09_g08441_MAGBIO' => 'mbi', 'MBI13_g01676_MAGBIO' => 'mbi', 'MBI14_g42955_MAGBIO' => 'mbi', 'MBI16_g13161_MAGBIO' => 'mbi', 'MBI17_g27204_MAGBIO' => 'mbi', 'MBI19_g21595_MAGBIO' => 'mbi', 'MD00G1148400' => 'mdo', 'MD02G1301200' => 'mdo', 'MD03G1227800' => 'mdo', 'MD05G1041100' => 'mdo', 'MD05G1124800' => 'mdo', 'MD05G1284000' => 'mdo', 'MD05G1338800' => 'mdo', 'MD05G1338900' => 'mdo', 'MD07G1022800' => 'mdo', 'MD10G1047500' => 'mdo', 'MD10G1127500' => 'mdo', 'MD10G1262300' => 'mdo', 'MD10G1293800' => 'mdo', 'MD16G1074300' => 'mdo', 'Medtr1g021670' => 'mtr', 'Medtr1g096320' => 'mtr', 'Medtr2g013690' => 'mtr', 'Medtr2g019450' => 'mtr', 'Medtr2g085170' => 'mtr', 'Medtr4g088785' => 'mtr', 'Medtr8g055930' => 'mtr', 'Medtr8g085850' => 'mtr', 'MELO3C002605.2' => 'cme', 'MELO3C003891.2' => 'cme', 'MELO3C004012.2' => 'cme', 'MELO3C007134.2' => 'cme', 'MELO3C008118.2' => 'cme', 'MELO3C016700.2' => 'cme', 'MELO3C024127.2' => 'cme', 'MELO3C033361.2' => 'cme', 'MELO3C033362.2' => 'cme', 'Migut.C00430' => 'egut', 'Migut.C01246' => 'egut', 'Migut.E00101' => 'egut', 'Migut.H01486' => 'egut', 'Migut.H01939' => 'egut', 'Migut.K00360' => 'egut', 'Migut.M00910' => 'egut', 'Migut.M01139' => 'egut', 'Migut.N02677' => 'egut', 'MSTRG.13252' => 'ama', 'MSTRG.14701' => 'ama', 'MSTRG.1521' => 'ama', 'MSTRG.15884' => 'ama', 'MSTRG.16242' => 'ama', 'MSTRG.22285' => 'ama', 'MSTRG.22444' => 'ama', 'MSTRG.2349' => 'ama', 'MSTRG.26308' => 'ama', 'MSTRG.28296' => 'ama', 'MSTRG.9895' => 'ama', 'Nitab4.5_0000110g0060' => 'nta', 'Nitab4.5_0000420g0130' => 'nta', 'Nitab4.5_0000422g0030' => 'nta', 'Nitab4.5_0000560g0180' => 'nta', 'Nitab4.5_0000703g0100' => 'nta', 'Nitab4.5_0000786g0200' => 'nta', 'Nitab4.5_0001336g0020' => 'nta', 'Nitab4.5_0001796g0030' => 'nta', 'Nitab4.5_0003348g0060' => 'nta', 'Nitab4.5_0003698g0040' => 'nta', 'Nitab4.5_0003942g0090' => 'nta', 'Nitab4.5_0004775g0070' => 'nta', 'Nitab4.5_0004864g0030' => 'nta', 'Nitab4.5_0005615g0020' => 'nta', 'Nitab4.5_0009288g0030' => 'nta', 'Nitab4.5_0009341g0010' => 'nta', 'Nitab4.5_0009535g0010' => 'nta', 'Nn1g03995' => 'nnu', 'Nn1g04100' => 'nnu', 'Nn1g06530' => 'nnu', 'Nn3g16404' => 'nnu', 'Nn3g17212' => 'nnu', 'Nn3g20776' => 'nnu', 'Nn3g21923' => 'nnu', 'Nn5g27737' => 'nnu', 'Nn5g29461' => 'nnu', 'Nn7g38355' => 'nnu', 'Nn8g39873' => 'nnu', 'Oeu000548.2' => 'oeu', 'Oeu004672.1' => 'oeu', 'Oeu015605.2' => 'oeu', 'Oeu016092.1' => 'oeu', 'Oeu017879.3' => 'oeu', 'Oeu024910.1' => 'oeu', 'Oeu028965.1' => 'oeu', 'Oeu031269.1' => 'oeu', 'Oeu031270.1' => 'oeu', 'Oeu032535.1' => 'oeu', 'Oeu034151.1' => 'oeu', 'Oeu034152.1' => 'oeu', 'Oeu034588.2' => 'oeu', 'Oeu050846.1' => 'oeu', 'Oeu050849.2' => 'oeu', 'Oeu051063.2' => 'oeu', 'Oeu052368.1' => 'oeu', 'Oeu052370.1' => 'oeu', 'Os01g0210400' => 'osa', 'Os01g0304300' => 'osa', 'Os01g0749100' => 'osa', 'Os02g0745800' => 'osa', 'Os03g0769050' => 'osa', 'Os05g0531500' => 'osa', 'Os06g0724300' => 'osa', 'Os11g0198100' => 'osa', 'Peaxi162Scf00069g01425' => 'pax', 'Peaxi162Scf00280g00811' => 'pax', 'Peaxi162Scf00310g00615' => 'pax', 'Peaxi162Scf00362g00542' => 'pax', 'Peaxi162Scf00461g00310' => 'pax', 'Peaxi162Scf00530g00118' => 'pax', 'Peaxi162Scf00541g00057' => 'pax', 'Peaxi162Scf00661g00017' => 'pax', 'Peaxi162Scf00926g00027' => 'pax', 'Peaxi162Scf01064g00263' => 'pax', 'Peaxi162Scf01211g00135' => 'pax', 'PGR004G2336' => 'pgr', 'PGR042G0327' => 'pgr', 'PGR042G1957' => 'pgr', 'PGR042G2003' => 'pgr', 'PGR042G3929' => 'pgr', 'PGR083G1137' => 'pgr', 'PGR083G1364' => 'pgr', 'PGSC0003DMG400003381' => 'stu', 'PGSC0003DMG400003417' => 'stu', 'PGSC0003DMG400008981' => 'stu', 'PGSC0003DMG400012417' => 'stu', 'PGSC0003DMG400012823' => 'stu', 'PGSC0003DMG400016885' => 'stu', 'PGSC0003DMG400022812' => 'stu', 'PGSC0003DMG400029726' => 'stu', 'PGSC0003DMG401009243' => 'stu', 'PGSC0003DMG401031505' => 'stu', 'PGSC0003DMG402031505' => 'stu', 'Phvul.001G017600' => 'pvu', 'Phvul.002G193500' => 'pvu', 'Phvul.002G228900' => 'pvu', 'Phvul.002G236800' => 'pvu', 'Phvul.003G049500' => 'pvu', 'Phvul.005G072000' => 'pvu', 'Phvul.006G164800' => 'pvu', 'Phvul.006G185100' => 'pvu', 'Phvul.007G090000' => 'pvu', 'Potri.001G399800' => 'ptr', 'Potri.002G149900' => 'ptr', 'Potri.004G044100' => 'ptr', 'Potri.004G177600' => 'ptr', 'Potri.009G138000' => 'ptr', 'Potri.010G094000' => 'ptr', 'Potri.011G053000' => 'ptr', 'Potri.011G119300' => 'ptr', 'Potri.013G113700' => 'ptr', 'Potri.018G107800' => 'ptr', 'Potri.019G084100' => 'ptr', 'Pp3c14_23720' => 'ppa', 'Pp3c16_6340' => 'ppa', 'Pp3c23_13420' => 'ppa', 'Pp3c24_2740' => 'ppa', 'Pp3c25_860' => 'ppa', 'Pp3c8_21750' => 'ppa', 'Prupe.1G273000' => 'ppe', 'Prupe.1G273700' => 'ppe', 'Prupe.1G274100' => 'ppe', 'Prupe.2G023300' => 'ppe', 'Prupe.4G048000' => 'ppe', 'Prupe.4G080400' => 'ppe', 'Prupe.4G181200' => 'ppe', 'Prupe.8G056900' => 'ppe', 'Prupe.8G168700' => 'ppe', 'Psat1g189080' => 'psa', 'Psat1g204760' => 'psa', 'Psat4g175560' => 'psa', 'Psat4g177720' => 'psa', 'Psat5g244240' => 'psa', 'Psat6g010720' => 'psa', 'Psat6g187200' => 'psa', 'Psat7g072040' => 'psa', 'PSO017G3501' => 'pso', 'PSO063G2148' => 'pso', 'PSO063G5608' => 'pso', 'PSO210G6392' => 'pso', 'PSO541G2319' => 'pso', 'PSO541G2836' => 'pso', 'PSO541G4012' => 'pso', 'PSO541G6253' => 'pso', 'PSO675G0580' => 'pso', 'PSO675G0856' => 'pso', 'PSO675G5635' => 'pso', 'PSO675G9157' => 'pso', 'PSO832G1660' => 'pso', 'PSO832G1969' => 'pso', 'QL02p007186' => 'qlo', 'QL02p033904' => 'qlo', 'QL03p064391' => 'qlo', 'QL05p040593' => 'qlo', 'QL05p058242' => 'qlo', 'QL08p021825' => 'qlo', 'QL11p004981' => 'qlo', 'RcHm_v2.0_Chr1g0318301' => 'rch', 'RcHm_v2.0_Chr4g0418501' => 'rch', 'RcHm_v2.0_Chr4g0439971' => 'rch', 'RcHm_v2.0_Chr5g0008541' => 'rch', 'RcHm_v2.0_Chr5g0014101' => 'rch', 'RcHm_v2.0_Chr5g0014131' => 'rch', 'RcHm_v2.0_Chr5g0033621' => 'rch', 'RcHm_v2.0_Chr6g0272041' => 'rch', 'RcHm_v2.0_Chr6g0278831' => 'rch', 'Rhsim02G0130400' => 'rsi', 'Rhsim02G0171100' => 'rsi', 'Rhsim05G0053000' => 'rsi', 'Rhsim05G0053100' => 'rsi', 'Rhsim06G0096500' => 'rsi', 'Rhsim06G0096600' => 'rsi', 'Rhsim06G0199100' => 'rsi', 'Rhsim12G0062300' => 'rsi', 'Rhsim12G0062800' => 'rsi', 'Sabra02G0118600' => 'sbr', 'Sabra04G0027300' => 'sbr', 'Sabra04G0119500' => 'sbr', 'Sabra08G0112500' => 'sbr', 'Sabra11G0036800' => 'sbr', 'Sabra11G0103800' => 'sbr', 'Sabra13G0096300' => 'sbr', 'Sabra16G0262300' => 'sbr', 'Sabra18G0091700' => 'sbr', 'Sabra19G0095400' => 'sbr', 'SalBow6G3080' => 'sbo', 'SalBow7G1157' => 'sbo', 'SalBow7G2123' => 'sbo', 'SalBow7G2285' => 'sbo', 'SalBow7G3537' => 'sbo', 'SalBow8G2947' => 'sbo', 'SalBow8G4463' => 'sbo', 'SalBow8G5466' => 'sbo', 'Sc01g0001750' => 'sci', 'Sc02g0006640' => 'sci', 'Sc02g0006670' => 'sci', 'Sc04g0008220' => 'sci', 'Sc05g0006190' => 'sci', 'Sc08g0002760' => 'sci', 'Sc17g0006170' => 'sci', 'Sc22g0002050' => 'sci', 'Sc23g0001190' => 'sci', 'Sc24g0000980' => 'sci', 'Sed0006245' => 'sed', 'Sed0007543' => 'sed', 'Sed0009411' => 'sed', 'Sed0010765' => 'sed', 'Sed0012944' => 'sed', 'Sed0014682' => 'sed', 'Sed0016174' => 'sed', 'Sed0016796' => 'sed', 'Sed0020317' => 'sed', 'Sed0021467' => 'sed', 'SEGI_01316' => 'sgi', 'SEGI_03374' => 'sgi', 'SEGI_16265' => 'sgi', 'SEGI_18569' => 'sgi', 'SEGI_20351' => 'sgi', 'SEGI_26395' => 'sgi', 'SEGI_29469' => 'sgi', 'SEGI_34771' => 'sgi', 'SEGI_36769' => 'sgi', 'SEGI_37139' => 'sgi', 'SGA_v2.0_scaffold100G29687' => 'sas', 'SGA_v2.0_scaffold118G32472' => 'sas', 'SGA_v2.0_scaffold14G07051' => 'sas', 'SGA_v2.0_scaffold183G39845' => 'sas', 'SGA_v2.0_scaffold1G00174' => 'sas', 'SGA_v2.0_scaffold22G09714' => 'sas', 'SGA_v2.0_scaffold333G48992' => 'sas', 'SGA_v2.0_scaffold46G17491' => 'sas', 'SGA_v2.0_scaffold49G18294' => 'sas', 'SGA_v2.0_scaffold63G21658' => 'sas', 'SHI01741' => 'shi', 'SHI05771' => 'shi', 'SHI18077' => 'shi', 'SHI20525' => 'shi', 'SHI20527' => 'shi', 'SHI20528' => 'shi', 'SMO172G0185' => 'smo', 'SMO198G0020' => 'smo', 'SMO351G0006' => 'smo', 'SMO356G0118' => 'smo', 'SMO358G0296' => 'smo', 'SMO367G0079' => 'smo', 'SMO367G1277' => 'smo', 'Solyc01g014220.3' => 'sly', 'Solyc01g111770.2' => 'sly', 'Solyc02g078180.3' => 'sly', 'Solyc03g006430.3' => 'sly', 'Solyc03g006456.1' => 'sly', 'Solyc03g079860.2' => 'sly', 'Solyc04g079770.3' => 'sly', 'Solyc05g007430.4' => 'sly', 'Solyc07g063150.3' => 'sly', 'Solyc08g016620.3' => 'sly', 'Solyc09g057590.3' => 'sly', 'Solyc09g057600.1' => 'sly', 'Solyc10g009050.3' => 'sly', 'Solyc11g017420.2' => 'sly', 'Sopen01g053810' => 'spe', 'Sopen02g023040' => 'spe', 'Sopen03g002440' => 'spe', 'Sopen04g033350' => 'spe', 'Sopen05g003310' => 'spe', 'Sopen07g004050' => 'spe', 'Sopen07g031340' => 'spe', 'Sopen08g006990' => 'spe', 'Sopen10g004830' => 'spe', 'Sopen11g009370' => 'spe', 'Sp1g24450' => 'spa', 'Sp1g29670' => 'spa', 'Sp1g39600' => 'spa', 'Sp2g11080' => 'spa', 'Sp2g13970' => 'spa', 'Sp4g16130' => 'spa', 'Sp6g13080' => 'spa', 'Sp7g37270' => 'spa', 'TAR371G0065' => 'tar', 'TAR376G0340' => 'tar', 'TAR376G0435' => 'tar', 'TAR381G0002' => 'tar', 'TAR381G1236' => 'tar', 'TAR624G0055' => 'tar', 'TAR624G0324' => 'tar', 'TAR624G0696' => 'tar', 'TAR624G0906' => 'tar', 'TAR625G0107' => 'tar', 'TAR626G0015' => 'tar', 'TAR626G1356' => 'tar', 'TAR627G0888' => 'tar', 'TAR628G0399' => 'tar', 'TAR628G1327' => 'tar', 'TAR629G2831' => 'tar', 'TAR629G2874' => 'tar', 'TAR633G1432' => 'tar', 'TAR633G2771' => 'tar', 'THA.LOC104803394' => 'tha', 'THA.LOC104805153' => 'tha', 'THA.LOC104806784' => 'tha', 'THA.LOC104810473' => 'tha', 'THA.LOC104813100' => 'tha', 'THA.LOC104814215' => 'tha', 'THA.LOC104815554' => 'tha', 'THA.LOC104820544' => 'tha', 'THA.LOC104824754' => 'tha', 'THA.LOC104827717' => 'tha', 'Thecc.02G031400' => 'tca', 'Thecc.02G055900' => 'tca', 'Thecc.02G350800' => 'tca', 'Thecc.06G150900' => 'tca', 'Thecc.06G186600' => 'tca', 'Thecc.07G089600' => 'tca', 'Thecc.08G020400' => 'tca', 'Thecc.08G182100' => 'tca', 'Thhalv10000873m.g' => 'esa', 'Thhalv10004185m.g' => 'esa', 'Thhalv10006981m.g' => 'esa', 'Thhalv10007204m.g' => 'esa', 'Thhalv10011374m.g' => 'esa', 'Thhalv10013482m.g' => 'esa', 'Thhalv10017801m.g' => 'esa', 'Thhalv10024983m.g' => 'esa', 'TPR.G12072' => 'tpr', 'TPR.G15769' => 'tpr', 'TPR.G16504' => 'tpr', 'TPR.G16506' => 'tpr', 'TPR.G24345' => 'tpr', 'TPR.G26666' => 'tpr', 'TPR.G27320' => 'tpr', 'TPR.G31819' => 'tpr', 'TPR.G38879' => 'tpr', 'TPR.G39015' => 'tpr', 'TPR.G8819' => 'tpr', 'TWI09G0924' => 'twi', 'TWI12G0811' => 'twi', 'TWI12G1294' => 'twi', 'TWI31G0150' => 'twi', 'TWI36G1262' => 'twi', 'TWI38G1287' => 'twi', 'TWI38G1633' => 'twi', 'TWI38G1982' => 'twi', 'TWI39G0116' => 'twi', 'TWI60G1011' => 'twi', 'TWI63G0171' => 'twi', 'TWI73G0839' => 'twi', 'TWI79G1511' => 'twi', 'unitig_0.g915' => 'ugi', 'unitig_0.g916' => 'ugi', 'unitig_21.g20219' => 'ugi', 'unitig_21.g20416' => 'ugi', 'unitig_578.g16132' => 'ugi', 'unitig_578.g16718' => 'ugi', 'unitig_62.g23481' => 'ugi', 'unitig_744.g24535' => 'ugi', 'unitig_749.g13525' => 'ugi', 'vmacro01248' => 'vma', 'vmacro02290' => 'vma', 'vmacro10946' => 'vma', 'vmacro11865' => 'vma', 'vmacro12493' => 'vma', 'vmacro17322' => 'vma', 'vmacro21599' => 'vma', 'vmacro23041' => 'vma', 'VMungo0251G0004' => 'vmu', 'VMungo0251G2639' => 'vmu', 'VMungo0251G2967' => 'vmu', 'VMungo0540G0864' => 'vmu', 'VMungo0540G1569' => 'vmu', 'VMungo0647G0317' => 'vmu', 'VMungo0720G1373' => 'vmu', 'VMungo0720G1508' => 'vmu', 'VMungo1080G0485' => 'vmu', 'VMungo1215G3177' => 'vmu', 'Zm00001eb112600' => 'zma', 'Zm00001eb120220' => 'zma', 'Zm00001eb153240' => 'zma', 'Zm00001eb168880' => 'zma', 'Zm00001eb213920' => 'zma', 'Zm00001eb228280' => 'zma', 'Zm00001eb254580' => 'zma', 'Zm00001eb272180' => 'zma', 'Zm00001eb293190' => 'zma', 'Zm00001eb322930' => 'zma', 'Zm00001eb353360' => 'zma', 'Zm00001eb353390' => 'zma', 'Zm00001eb353430' => 'zma', 'Zm00001eb353440' => 'zma', 'Zm00001eb353780' => 'zma' ) $gf_id = 'HOM05D000499' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000499' ) $data_identifier = 'HOM05D000499' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 29, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 12, 'amhyb' => (int) 8, 'aly' => (int) 12, 'aox' => (int) 9, 'arhy' => (int) 26, 'ath' => (int) 8, 'atr' => (int) 7, 'acertr' => (int) 10, 'cqu' => (int) 15, 'bca' => (int) 29, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 11, 'cansat' => (int) 8, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 9, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 8, 'cpa' => (int) 10, 'csa' => (int) 7, 'camsi' => (int) 20, 'dca' => (int) 8, 'din' => (int) 12, 'dzi' => (int) 14, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 6, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 38, 'gra' => (int) 16, 'vvi' => (int) 8, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 5, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 11, 'lja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 11, 'mpo' => (int) 3, 'mbi' => (int) 14, 'mdo' => (int) 14, 'mtr' => (int) 8, 'cme' => (int) 9, 'egut' => (int) 9, 'ama' => (int) 11, 'nta' => (int) 17, 'nnu' => (int) 11, 'oeu' => (int) 18, 'osa' => (int) 8, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 6, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 9, 'rsi' => (int) 9, 'sbr' => (int) 10, 'sbo' => (int) 8, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 10, 'sas' => (int) 10, 'shi' => (int) 6, 'smo' => (int) 7, 'sly' => (int) 14, 'spe' => (int) 10, 'spa' => (int) 8, 'tar' => (int) 19, 'tha' => (int) 10, 'tca' => (int) 8, 'esa' => (int) 8, 'tpr' => (int) 11, 'twi' => (int) 13, 'ugi' => (int) 9, 'vma' => (int) 8, 'vmu' => (int) 10, 'zma' => (int) 15 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb353780' $species_info = array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ) $local_species = 'ugi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000499', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1066', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p29780' => 'bna', 'A02p33180' => 'bna', 'A03p16470' => 'bna', 'A03p66010' => 'bna', 'A04p25970' => 'bna', 'A06p01270' => 'bna', 'A06p46080' => 'bna', 'A07p11400' => 'bna', 'A08p01840' => 'bna', 'A08p08230' => 'bna', 'A08p25740' => 'bna', 'A09p32070' => 'bna', 'A09p37830' => 'bna', 'A09p42840' => 'bna', 'A09p42850' => 'bna', 'Aa31LG10G2060' => 'aar', 'Aa31LG2G7410' => 'aar', 'Aa31LG6G10200' => 'aar', 'Aa31LG6G16680' => 'aar', 'Aa31LG6G8470' => 'aar', 'Aa31LG9G12730' => 'aar', 'Aa31LG9G13680' => 'aar', 'Aa31LG9G14920' => 'aar', 'Aa31LG9G6650' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4977' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5467' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3254' => 'aag', 'Actinidia02578' => 'ach', 'Actinidia07693' => 'ach', 'Actinidia08413' => 'ach', 'Actinidia08414' => 'ach', 'Actinidia15289' => 'ach', 'Actinidia19871' => 'ach', 'Actinidia21475' => 'ach', 'Actinidia22576' => 'ach', 'Actinidia28327' => 'ach', 'Actinidia32491' => 'ach', 'Actinidia39463' => 'ach', 'Actinidia39571' => 'ach', 'Ah.01g013750' => 'amhyb', 'Ah.01g023210' => 'amhyb', 'Ah.04g164850' => 'amhyb', 'Ah.05g178060' => 'amhyb', 'Ah.07g204270' => 'amhyb', 'Ah.07g208480' => 'amhyb', 'Ah.09g237410' => 'amhyb', 'Ah.14g089460' => 'amhyb', 'AL1G41790' => 'aly', 'AL1G49050' => 'aly', 'AL1G53810' => 'aly', 'AL1G61400' => 'aly', 'AL4G18580' => 'aly', 'AL5G12510' => 'aly', 'AL5G12540' => 'aly', 'AL6G43230' => 'aly', 'AL7G10370' => 'aly', 'AL7G19250' => 'aly', 'AL8G12240' => 'aly', 'AL8G18540' => 'aly', 'Aqoxy1G02409' => 'aox', 'Aqoxy2G03993' => 'aox', 'Aqoxy3G03357' => 'aox', 'Aqoxy4G00785' => 'aox', 'Aqoxy5G02598' => 'aox', 'Aqoxy6G00132' => 'aox', 'Aqoxy7G01776' => 'aox', 'Aqoxy7G02316' => 'aox', 'Aqoxy7G03973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.12AFKW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B8730' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27IQR1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3F75VG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3RE0GA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41TCQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.527VTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FIR39' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5W8UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DA38EV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ63HS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H1I32C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HC27T5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4M8AP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7N3CZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9UVDZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LS1NQA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT1D4B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SKC4TM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCFV76' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF9Q1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQWD9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1ZM88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WE07RT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YCK7VH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJE6Q6' => 'arhy', 'AT1G28240' => 'ath', 'AT1G34550' => 'ath', 'AT1G53040' => 'ath', 'AT2G02910' => 'ath', 'AT4G09630' => 'ath', 'AT4G38500' => 'ath', 'AT5G42660' => 'ath', 'AT5G46220' => 'ath', 'ATR0152G026' => 'atr', 'ATR0564G343' => 'atr', 'ATR0706G151' => 'atr', 'ATR0733G207' => 'atr', 'ATR0751G234' => 'atr', 'ATR0807G048' => 'atr', 'ATR1091G084' => 'atr', 'Atru.chr10.1229' => 'acertr', 'Atru.chr10.1230' => 'acertr', 'Atru.chr10.1874' => 'acertr', 'Atru.chr11.1808' => 'acertr', 'Atru.chr13.1795' => 'acertr', 'Atru.chr13.570' => 'acertr', 'Atru.chr2.2608' => 'acertr', 'Atru.chr2.2609' => 'acertr', 'Atru.chr5.3428' => 'acertr', 'Atru.chr8.1171' => 'acertr', 'AUR62004651' => 'cqu', 'AUR62008675' => 'cqu', 'AUR62010014' => 'cqu', 'AUR62013004' => 'cqu', 'AUR62014825' => 'cqu', 'AUR62015015' => 'cqu', 'AUR62015151' => 'cqu', 'AUR62017020' => 'cqu', 'AUR62019422' => 'cqu', 'AUR62023570' => 'cqu', 'AUR62025571' => 'cqu', 'AUR62029098' => 'cqu', 'AUR62033863' => 'cqu', 'AUR62034296' => 'cqu', 'AUR62040075' => 'cqu', 'BcaB02g07334' => 'bca', 'BcaB02g10575' => 'bca', 'BcaB03g12119' => 'bca', 'BcaB03g12120' => 'bca', 'BcaB03g13945' => 'bca', 'BcaB04g17123' => 'bca', 'BcaB04g17867' => 'bca', 'BcaB04g19839' => 'bca', 'BcaB07g30317' => 'bca', 'BcaB07g32432' => 'bca', 'BcaB07g33362' => 'bca', 'BcaB08g36611' => 'bca', 'BcaC01g00028' => 'bca', 'BcaC01g01356' => 'bca', 'BcaC01g02034' => 'bca', 'BcaC01g06051' => 'bca', 'BcaC03g16839' => 'bca', 'BcaC03g17176' => 'bca', 'BcaC05g26829' => 'bca', 'BcaC06g31490' => 'bca', 'BcaC06g35344' => 'bca', 'BcaC06g36570' => 'bca', 'BcaC07g37537' => 'bca', 'BcaC08g43491' => 'bca', 'BcaC08g43773' => 'bca', 'BcaNung00234' => 'bca', 'BcaNung01982' => 'bca', 'BcaNung03707' => 'bca', 'BcaNung06454' => 'bca', 'BolC2t10762H' => 'bol', 'BolC2t11191H' => 'bol', 'BolC3t14322H' => 'bol', 'BolC3t19747H' => 'bol', 'BolC3t21425H' => 'bol', 'BolC4t27800H' => 'bol', 'BolC5t31423H' => 'bol', 'BolC6t35951H' => 'bol', 'BolC6t36282H' => 'bol', 'BolC7t40678H' => 'bol', 'BolC7t40679H' => 'bol', 'BolC7t42222H' => 'bol', 'BolC7t43492H' => 'bol', 'BolC7t46785H' => 'bol', 'BolC8t47853H' => 'bol', 'BolC9t56805H' => 'bol', 'BraA02t08000Z' => 'bra', 'BraA02t08341Z' => 'bra', 'BraA03t10936Z' => 'bra', 'BraA03t15657Z' => 'bra', 'BraA04t18100Z' => 'bra', 'BraA05t20523Z' => 'bra', 'BraA06t23353Z' => 'bra', 'BraA06t27473Z' => 'bra', 'BraA06t27769Z' => 'bra', 'BraA07t28928Z' => 'bra', 'BraA08t32236Z' => 'bra', 'BraA08t32841Z' => 'bra', 'BraA08t34524Z' => 'bra', 'BraA09t38742Z' => 'bra', 'BraA09t39295Z' => 'bra', 'C02p47180' => 'bna', 'C02p50990' => 'bna', 'C03p19360' => 'bna', 'C03p74950' => 'bna', 'C03p91000' => 'bna', 'C04p63260' => 'bna', 'C05p27050' => 'bna', 'C06p08750' => 'bna', 'C06p11490' => 'bna', 'C07p02820' => 'bna', 'C07p17180' => 'bna', 'C07p29440' => 'bna', 'C07p63730' => 'bna', 'C09p39260' => 'bna', 'CAN.G1164.34' => 'can', 'CAN.G1164.39' => 'can', 'CAN.G1530.3' => 'can', 'CAN.G162.61' => 'can', 'CAN.G176.6' => 'can', 'CAN.G289.49' => 'can', 'CAN.G370.21' => 'can', 'CAN.G370.22' => 'can', 'CAN.G371.117' => 'can', 'CAN.G58.37' => 'can', 'CAN.G588.98' => 'can', 'CANSAT21G2266' => 'cansat', 'CANSAT25G2799' => 'cansat', 'CANSAT35G0862' => 'cansat', 'CANSAT35G1704' => 'cansat', 'CANSAT35G1760' => 'cansat', 'CANSAT56G3971' => 'cansat', 'CANSAT56G4116' => 'cansat', 'CANSAT80G1259' => 'cansat', 'CARHR027730' => 'chi', 'CARHR033880' => 'chi', 'CARHR043270' => 'chi', 'CARHR145330' => 'chi', 'CARHR145340' => 'chi', 'CARHR175570' => 'chi', 'CARHR181570' => 'chi', 'CARHR258470' => 'chi', 'CARHR260490' => 'chi', 'CARHR294220' => 'chi', 'Carub.0001s2668' => 'cru', 'Carub.0001s3257' => 'cru', 'Carub.0001s4220' => 'cru', 'Carub.0005s0179' => 'cru', 'Carub.0006s2807' => 'cru', 'Carub.0007s0039' => 'cru', 'Carub.0008s0169' => 'cru', 'Carub.0008s0636' => 'cru', 'Ca_00338_v3' => 'car', 'Ca_00542_v3' => 'car', 'Ca_01844_v3' => 'car', 'Ca_10611_v3' => 'car', 'Ca_13326_v3' => 'car', 'Ca_17944_v3' => 'car', 'Ca_18546_v3' => 'car', 'Ca_24219_v3' => 'car', 'Ca_29972_v3' => 'car', 'CBR_g3681' => 'cbr', 'CBR_g40021' => 'cbr', 'Cc01_g08140' => 'ccan', 'Cc02_g13410' => 'ccan', 'Cc02_g37480' => 'ccan', 'Cc05_g12030' => 'ccan', 'Cc09_g03370' => 'ccan', 'Cc09_g10300' => 'ccan', 'Cc10_g03530' => 'ccan', 'Cc10_g11380' => 'ccan', 'CDE01G0176' => 'cde', 'CDE02G0675' => 'cde', 'CDE02G0942' => 'cde', 'CDE02G1153' => 'cde', 'CDE02G4177' => 'cde', 'CDE04G2117' => 'cde', 'CDE04G2736' => 'cde', 'CDE08G1161' => 'cde', 'CDE09G1238' => 'cde', 'Cfa000467' => 'cfa', 'Cfa000947' => 'cfa', 'Cfa004969' => 'cfa', 'Cfa005284' => 'cfa', 'Cfa008993' => 'cfa', 'Cfa018187' => 'cfa', 'Cfa018454' => 'cfa', 'Cfa020585' => 'cfa', 'Ciclev10000424m.g' => 'ccl', 'Ciclev10003605m.g' => 'ccl', 'Ciclev10007828m.g' => 'ccl', 'Ciclev10014620m.g' => 'ccl', 'Ciclev10015169m.g' => 'ccl', 'Ciclev10018291m.g' => 'ccl', 'Ciclev10028256m.g' => 'ccl', 'Ciclev10033822m.g' => 'ccl', 'CiPaw.05G060300' => 'cil', 'CiPaw.05G085000' => 'cil', 'CiPaw.06G083700' => 'cil', 'CiPaw.06G120300' => 'cil', 'CiPaw.09G060500' => 'cil', 'CiPaw.09G123800' => 'cil', 'CiPaw.11G169700' => 'cil', 'CiPaw.12G118300' => 'cil', 'CiPaw.15G071000' => 'cil', 'CiPaw.15G081900' => 'cil', 'ClCG01G024610' => 'cla', 'ClCG03G006070' => 'cla', 'ClCG05G019250' => 'cla', 'ClCG09G009500' => 'cla', 'ClCG11G008200' => 'cla', 'ClCG11G018080' => 'cla', 'COL.COLO4_17373' => 'col', 'COL.COLO4_22994' => 'col', 'COL.COLO4_26389' => 'col', 'COL.COLO4_27170' => 'col', 'COL.COLO4_31074' => 'col', 'COL.COLO4_31465' => 'col', 'COL.COLO4_36438' => 'col', 'COL.COLO4_36439' => 'col', 'Cpa.g.c38781' => 'cpa', 'Cpa.g.sc128.12' => 'cpa', 'Cpa.g.sc166.7' => 'cpa', 'Cpa.g.sc166.8' => 'cpa', 'Cpa.g.sc20.111' => 'cpa', 'Cpa.g.sc27.31' => 'cpa', 'Cpa.g.sc64.36' => 'cpa', 'Cpa.g.sc64.37' => 'cpa', 'Cpa.g.sc66.49' => 'cpa', 'Cpa.g.sc80.64' => 'cpa', 'CsaV3_1G012320' => 'csa', 'CsaV3_2G008480' => 'csa', 'CsaV3_2G033450' => 'csa', 'CsaV3_3G044830' => 'csa', 'CsaV3_4G033710' => 'csa', 'CsaV3_6G051730' => 'csa', 'CsaV3_7G025350' => 'csa', 'CSS0001067' => 'camsi', 'CSS0005996' => 'camsi', 'CSS0006590' => 'camsi', 'CSS0009673' => 'camsi', 'CSS0010201' => 'camsi', 'CSS0010549' => 'camsi', 'CSS0011364' => 'camsi', 'CSS0014473' => 'camsi', 'CSS0014961' => 'camsi', 'CSS0020191' => 'camsi', 'CSS0021165' => 'camsi', 'CSS0022306' => 'camsi', 'CSS0030591' => 'camsi', 'CSS0030696' => 'camsi', 'CSS0032653' => 'camsi', 'CSS0037487' => 'camsi', 'CSS0041102' => 'camsi', 'CSS0041261' => 'camsi', 'CSS0046246' => 'camsi', 'CSS0049256' => 'camsi', 'DCAR_004075' => 'dca', 'DCAR_011538' => 'dca', 'DCAR_019553' => 'dca', 'DCAR_020952' => 'dca', 'DCAR_021739' => 'dca', 'DCAR_027407' => 'dca', 'DCAR_027913' => 'dca', 'DCAR_028066' => 'dca', 'Dinv05899' => 'din', 'Dinv07563' => 'din', 'Dinv08010' => 'din', 'Dinv14125' => 'din', 'Dinv20172' => 'din', 'Dinv30743' => 'din', 'Dinv31229' => 'din', 'Dinv34162' => 'din', 'Dinv36028' => 'din', 'Dinv39368' => 'din', 'Dinv40565' => 'din', 'Dinv41706' => 'din', 'Duzib052G0089' => 'dzi', 'Duzib116G0641' => 'dzi', 'Duzib132G0069' => 'dzi', 'Duzib132G1219' => 'dzi', 'Duzib147G0278' => 'dzi', 'Duzib160G0480' => 'dzi', 'Duzib170G0661' => 'dzi', 'Duzib177G0591' => 'dzi', 'Duzib187G1353' => 'dzi', 'Duzib192G0858' => 'dzi', 'Duzib192G0883' => 'dzi', 'Duzib213G0506' => 'dzi', 'Duzib235G0289' => 'dzi', 'Duzib251G0422' => 'dzi', 'ECA232G3898' => 'eca', 'ECA233G5950' => 'eca', 'ECA234G1699' => 'eca', 'ECA234G2421' => 'eca', 'ECA236G0426' => 'eca', 'ECA236G4331' => 'eca', 'ECA248G2573' => 'eca', 'EL10Ac1g00077' => 'bvu', 'EL10Ac1g01746' => 'bvu', 'EL10Ac2g03464' => 'bvu', 'EL10Ac4g08176' => 'bvu', 'EL10Ac7g17521' => 'bvu', 'EL10Ac8g20386' => 'bvu', 'EL10Ac9g21343' => 'bvu', 'EL10Ac9g22688' => 'bvu', 'Eucgr.B03434' => 'egr', 'Eucgr.D00618' => 'egr', 'Eucgr.E02395' => 'egr', 'Eucgr.F01129' => 'egr', 'Eucgr.F02622' => 'egr', 'Eucgr.F04207' => 'egr', 'FAN01G0570' => 'fan', 'FAN03G3351' => 'fan', 'FAN06G3702' => 'fan', 'FAN07G2149' => 'fan', 'FAN10G3758' => 'fan', 'FAN11G1170' => 'fan', 'FAN11G2050' => 'fan', 'FAN11G2724' => 'fan', 'FAN12G1700' => 'fan', 'FAN12G2028' => 'fan', 'FAN15G1160' => 'fan', 'FAN15G3063' => 'fan', 'FAN16G2540' => 'fan', 'FAN16G3077' => 'fan', 'FAN16G3624' => 'fan', 'FAN17G0221' => 'fan', 'FAN20G2492' => 'fan', 'FAN20G2905' => 'fan', 'FAN21G0548' => 'fan', 'FAN21G1300' => 'fan', 'FAN22G0077' => 'fan', 'FAN22G1315' => 'fan', 'FAN24G1280' => 'fan', 'FAN24G1445' => 'fan', 'FAN24G3527' => 'fan', 'FAN25G0464' => 'fan', 'FAN25G2885' => 'fan', 'FAN25G3270' => 'fan', 'FAN27G1101' => 'fan', 'FAN27G2846' => 'fan', 'FAN27G3524' => 'fan', 'FvH4_2g11770' => 'fve', 'FvH4_2g15630' => 'fve', 'FvH4_3g05570' => 'fve', 'FvH4_3g09110' => 'fve', 'FvH4_3g19940' => 'fve', 'FvH4_4g04821' => 'fve', 'FvH4_4g31480' => 'fve', 'FvH4_7g01740' => 'fve', 'Glyma.05G130400' => 'gma', 'Glyma.05G156400' => 'gma', 'Glyma.07G197000' => 'gma', 'Glyma.08G085151' => 'gma', 'Glyma.08G114500' => 'gma', 'Glyma.08G300400' => 'gma', 'Glyma.10G215800' => 'gma', 'Glyma.12G224400' => 'gma', 'Glyma.13G179300' => 'gma', 'Glyma.13G218151' => 'gma', 'Glyma.13G238800' => 'gma', 'Glyma.13G276900' => 'gma', 'Glyma.14G078200' => 'gma', 'Glyma.15G074500' => 'gma', 'Glyma.15G094100' => 'gma', 'Glyma.17G247200' => 'gma', 'Glyma.18G120100' => 'gma', 'Glyma.20G176000' => 'gma', 'Gohir.A01G063600' => 'ghi', 'Gohir.A01G170301' => 'ghi', 'Gohir.A02G060500' => 'ghi', 'Gohir.A05G133850' => 'ghi', 'Gohir.A05G161400' => 'ghi', 'Gohir.A06G012900' => 'ghi', 'Gohir.A06G035901' => 'ghi', 'Gohir.A06G127100' => 'ghi', 'Gohir.A06G210500' => 'ghi', 'Gohir.A08G008650' => 'ghi', 'Gohir.A09G072700' => 'ghi', 'Gohir.A09G088301' => 'ghi', 'Gohir.A10G040600' => 'ghi', 'Gohir.A12G036300' => 'ghi', 'Gohir.A12G143350' => 'ghi', 'Gohir.A12G165500' => 'ghi', 'Gohir.A13G145700' => 'ghi', 'Gohir.D01G050000' => 'ghi', 'Gohir.D01G051366' => 'ghi', 'Gohir.D01G161350' => 'ghi', 'Gohir.D02G065900' => 'ghi', 'Gohir.D05G164200' => 'ghi', 'Gohir.D05G355500' => 'ghi', 'Gohir.D06G010400' => 'ghi', 'Gohir.D06G111250' => 'ghi', 'Gohir.D06G132000' => 'ghi', 'Gohir.D06G210500' => 'ghi', 'Gohir.D07G165675' => 'ghi', 'Gohir.D08G062240' => 'ghi', 'Gohir.D08G086101' => 'ghi', 'Gohir.D08G138060' => 'ghi', 'Gohir.D09G072300' => 'ghi', 'Gohir.D10G041400' => 'ghi', 'Gohir.D11G191020' => 'ghi', 'Gohir.D11G212066' => 'ghi', 'Gohir.D12G036300' => 'ghi', 'Gohir.D12G168600' => 'ghi', 'Gohir.D13G150600' => 'ghi', 'Gorai.001G057300' => 'gra', 'Gorai.002G069900' => 'gra', 'Gorai.002G200000' => 'gra', 'Gorai.003G067600' => 'gra', 'Gorai.005G074800' => 'gra', 'Gorai.006G087300' => 'gra', 'Gorai.008G037500' => 'gra', 'Gorai.008G181400' => 'gra', 'Gorai.009G169400' => 'gra', 'Gorai.009G387900' => 'gra', 'Gorai.010G013300' => 'gra', 'Gorai.010G153800' => 'gra', 'Gorai.010G255800' => 'gra', 'Gorai.011G043700' => 'gra', 'Gorai.011G198900' => 'gra', 'Gorai.013G168400' => 'gra', 'GSVIVG01005212001' => 'vvi', 'GSVIVG01006163001' => 'vvi', 'GSVIVG01009625001' => 'vvi', 'GSVIVG01014338001' => 'vvi', 'GSVIVG01020005001' => 'vvi', 'GSVIVG01021450001' => 'vvi', 'GSVIVG01023975001' => 'vvi', 'GSVIVG01034490001' => 'vvi', 'HanXRQChr04g0112071' => 'han', 'HanXRQChr05g0131151' => 'han', 'HanXRQChr09g0262371' => 'han', 'HanXRQChr09g0268401' => 'han', 'HanXRQChr10g0279241' => 'han', 'HanXRQChr10g0297961' => 'han', 'HanXRQChr11g0326231' => 'han', 'HanXRQChr11g0328471' => 'han', 'HanXRQChr16g0507941' => 'han', 'HanXRQChr17g0560211' => 'han', 'Haze_02108' => 'cav', 'Haze_02428' => 'cav', 'Haze_05593' => 'cav', 'Haze_06448' => 'cav', 'Haze_09427' => 'cav', 'Haze_12022' => 'cav', 'Haze_17612' => 'cav', 'Haze_17928' => 'cav', 'Hma1.2p1_0032F.1_g019250' => 'hma', 'Hma1.2p1_0163F.1_g072690' => 'hma', 'Hma1.2p1_0265F.1_g106710' => 'hma', 'Hma1.2p1_0286F.1_g113970' => 'hma', 'Hma1.2p1_0363F.1_g136640' => 'hma', 'Hma1.2p1_0584F.1_g183470' => 'hma', 'Hma1.2p1_0885F.1_g232570' => 'hma', 'HPP92_006022' => 'vpl', 'HPP92_007320' => 'vpl', 'HPP92_011521' => 'vpl', 'HPP92_019387' => 'vpl', 'HPP92_024038' => 'vpl', 'Hund05891' => 'sun', 'Hund06450' => 'sun', 'Hund12053' => 'sun', 'Hund16800' => 'sun', 'Hund21222' => 'sun', 'Hund22896' => 'sun', 'Hund23746' => 'sun', 'Hund27083' => 'sun', 'Lalb_Chr02g0141831' => 'lal', 'Lalb_Chr02g0141841' => 'lal', 'Lalb_Chr05g0220411' => 'lal', 'Lalb_Chr06g0162081' => 'lal', 'Lalb_Chr09g0327651' => 'lal', 'Lalb_Chr13g0295051' => 'lal', 'Lalb_Chr15g0086801' => 'lal', 'Lalb_Chr16g0383781' => 'lal', 'Lalb_Chr16g0383791' => 'lal', 'Lalb_Chr18g0055441' => 'lal', 'Lalb_Chr18g0059611' => 'lal', 'Lalb_Chr20g0109661' => 'lal', 'Lalb_Chr20g0109831' => 'lal', 'Lalb_Chr20g0121871' => 'lal', 'Lalb_Chr22g0355361' => 'lal', 'Lalb_Chr25g0286371' => 'lal', 'Lj1A1187G43' => 'lonja', 'Lj1A1205T50' => 'lonja', 'Lj1A800G33' => 'lonja', 'Lj1C1187T7' => 'lonja', 'Lj1C843T11' => 'lonja', 'Lj1g0010940' => 'lja', 'Lj2A288T69' => 'lonja', 'Lj3g0024276' => 'lja', 'Lj4A47T76' => 'lonja', 'Lj4g0005805' => 'lja', 'Lj4g0006097' => 'lja', 'Lj4g0008528' => 'lja', 'Lj4g0024907' => 'lja', 'Lj5g0012472' => 'lja', 'Lj5g0018648' => 'lja', 'Lj6C789G1' => 'lonja', 'Lj6g0004000' => 'lja', 'Lj7A292G67' => 'lonja', 'Lj7A292T64' => 'lonja', 'Lj9A400T58' => 'lonja', 'Lsat_1_v5_gn_1_126181' => 'lsa', 'Lsat_1_v5_gn_4_123041' => 'lsa', 'Lsat_1_v5_gn_4_133620' => 'lsa', 'Lsat_1_v5_gn_4_53221' => 'lsa', 'Lsat_1_v5_gn_4_71961' => 'lsa', 'Lsat_1_v5_gn_7_105241' => 'lsa', 'Lsat_1_v5_gn_7_21361' => 'lsa', 'Lsat_1_v5_gn_7_28860' => 'lsa', 'Lsat_1_v5_gn_7_31260' => 'lsa', 'Lsat_1_v5_gn_8_52801' => 'lsa', 'Manes.02G191400' => 'mes', 'Manes.03G110100' => 'mes', 'Manes.04G071100' => 'mes', 'Manes.05G100500' => 'mes', 'Manes.05G164700' => 'mes', 'Manes.15G087000' => 'mes', 'Manes.15G121500' => 'mes', 'Manes.16G028300' => 'mes', 'Manes.17G046100' => 'mes', 'Manes.17G069800' => 'mes', 'Manes.18G100500' => 'mes', 'Mapoly0002s0109' => 'mpo', 'Mapoly0024s0007' => 'mpo', 'Mapoly0089s0032' => 'mpo', 'MBI04_g42241_MAGBIO' => 'mbi', 'MBI05_g11988_MAGBIO' => 'mbi', 'MBI05_g35452_MAGBIO' => 'mbi', 'MBI07_g30179_MAGBIO' => 'mbi', 'MBI07_g35859_MAGBIO' => 'mbi', 'MBI07_g35860_MAGBIO' => 'mbi', 'MBI07_g37166_MAGBIO' => 'mbi', 'MBI08_g18172_MAGBIO' => 'mbi', 'MBI09_g08441_MAGBIO' => 'mbi', 'MBI13_g01676_MAGBIO' => 'mbi', 'MBI14_g42955_MAGBIO' => 'mbi', 'MBI16_g13161_MAGBIO' => 'mbi', 'MBI17_g27204_MAGBIO' => 'mbi', 'MBI19_g21595_MAGBIO' => 'mbi', 'MD00G1148400' => 'mdo', 'MD02G1301200' => 'mdo', 'MD03G1227800' => 'mdo', 'MD05G1041100' => 'mdo', 'MD05G1124800' => 'mdo', 'MD05G1284000' => 'mdo', 'MD05G1338800' => 'mdo', 'MD05G1338900' => 'mdo', 'MD07G1022800' => 'mdo', 'MD10G1047500' => 'mdo', 'MD10G1127500' => 'mdo', 'MD10G1262300' => 'mdo', 'MD10G1293800' => 'mdo', 'MD16G1074300' => 'mdo', 'Medtr1g021670' => 'mtr', 'Medtr1g096320' => 'mtr', 'Medtr2g013690' => 'mtr', 'Medtr2g019450' => 'mtr', 'Medtr2g085170' => 'mtr', 'Medtr4g088785' => 'mtr', 'Medtr8g055930' => 'mtr', 'Medtr8g085850' => 'mtr', 'MELO3C002605.2' => 'cme', 'MELO3C003891.2' => 'cme', 'MELO3C004012.2' => 'cme', 'MELO3C007134.2' => 'cme', 'MELO3C008118.2' => 'cme', 'MELO3C016700.2' => 'cme', 'MELO3C024127.2' => 'cme', 'MELO3C033361.2' => 'cme', 'MELO3C033362.2' => 'cme', 'Migut.C00430' => 'egut', 'Migut.C01246' => 'egut', 'Migut.E00101' => 'egut', 'Migut.H01486' => 'egut', 'Migut.H01939' => 'egut', 'Migut.K00360' => 'egut', 'Migut.M00910' => 'egut', 'Migut.M01139' => 'egut', 'Migut.N02677' => 'egut', 'MSTRG.13252' => 'ama', 'MSTRG.14701' => 'ama', 'MSTRG.1521' => 'ama', 'MSTRG.15884' => 'ama', 'MSTRG.16242' => 'ama', 'MSTRG.22285' => 'ama', 'MSTRG.22444' => 'ama', 'MSTRG.2349' => 'ama', 'MSTRG.26308' => 'ama', 'MSTRG.28296' => 'ama', 'MSTRG.9895' => 'ama', 'Nitab4.5_0000110g0060' => 'nta', 'Nitab4.5_0000420g0130' => 'nta', 'Nitab4.5_0000422g0030' => 'nta', 'Nitab4.5_0000560g0180' => 'nta', 'Nitab4.5_0000703g0100' => 'nta', 'Nitab4.5_0000786g0200' => 'nta', 'Nitab4.5_0001336g0020' => 'nta', 'Nitab4.5_0001796g0030' => 'nta', 'Nitab4.5_0003348g0060' => 'nta', 'Nitab4.5_0003698g0040' => 'nta', 'Nitab4.5_0003942g0090' => 'nta', 'Nitab4.5_0004775g0070' => 'nta', 'Nitab4.5_0004864g0030' => 'nta', 'Nitab4.5_0005615g0020' => 'nta', 'Nitab4.5_0009288g0030' => 'nta', 'Nitab4.5_0009341g0010' => 'nta', 'Nitab4.5_0009535g0010' => 'nta', 'Nn1g03995' => 'nnu', 'Nn1g04100' => 'nnu', 'Nn1g06530' => 'nnu', 'Nn3g16404' => 'nnu', 'Nn3g17212' => 'nnu', 'Nn3g20776' => 'nnu', 'Nn3g21923' => 'nnu', 'Nn5g27737' => 'nnu', 'Nn5g29461' => 'nnu', 'Nn7g38355' => 'nnu', 'Nn8g39873' => 'nnu', 'Oeu000548.2' => 'oeu', 'Oeu004672.1' => 'oeu', 'Oeu015605.2' => 'oeu', 'Oeu016092.1' => 'oeu', 'Oeu017879.3' => 'oeu', 'Oeu024910.1' => 'oeu', 'Oeu028965.1' => 'oeu', 'Oeu031269.1' => 'oeu', 'Oeu031270.1' => 'oeu', 'Oeu032535.1' => 'oeu', 'Oeu034151.1' => 'oeu', 'Oeu034152.1' => 'oeu', 'Oeu034588.2' => 'oeu', 'Oeu050846.1' => 'oeu', 'Oeu050849.2' => 'oeu', 'Oeu051063.2' => 'oeu', 'Oeu052368.1' => 'oeu', 'Oeu052370.1' => 'oeu', 'Os01g0210400' => 'osa', 'Os01g0304300' => 'osa', 'Os01g0749100' => 'osa', 'Os02g0745800' => 'osa', 'Os03g0769050' => 'osa', 'Os05g0531500' => 'osa', 'Os06g0724300' => 'osa', 'Os11g0198100' => 'osa', 'Peaxi162Scf00069g01425' => 'pax', 'Peaxi162Scf00280g00811' => 'pax', 'Peaxi162Scf00310g00615' => 'pax', 'Peaxi162Scf00362g00542' => 'pax', 'Peaxi162Scf00461g00310' => 'pax', 'Peaxi162Scf00530g00118' => 'pax', 'Peaxi162Scf00541g00057' => 'pax', 'Peaxi162Scf00661g00017' => 'pax', 'Peaxi162Scf00926g00027' => 'pax', 'Peaxi162Scf01064g00263' => 'pax', 'Peaxi162Scf01211g00135' => 'pax', 'PGR004G2336' => 'pgr', 'PGR042G0327' => 'pgr', 'PGR042G1957' => 'pgr', 'PGR042G2003' => 'pgr', 'PGR042G3929' => 'pgr', 'PGR083G1137' => 'pgr', 'PGR083G1364' => 'pgr', 'PGSC0003DMG400003381' => 'stu', 'PGSC0003DMG400003417' => 'stu', 'PGSC0003DMG400008981' => 'stu', 'PGSC0003DMG400012417' => 'stu', 'PGSC0003DMG400012823' => 'stu', 'PGSC0003DMG400016885' => 'stu', 'PGSC0003DMG400022812' => 'stu', 'PGSC0003DMG400029726' => 'stu', 'PGSC0003DMG401009243' => 'stu', 'PGSC0003DMG401031505' => 'stu', 'PGSC0003DMG402031505' => 'stu', 'Phvul.001G017600' => 'pvu', 'Phvul.002G193500' => 'pvu', 'Phvul.002G228900' => 'pvu', 'Phvul.002G236800' => 'pvu', 'Phvul.003G049500' => 'pvu', 'Phvul.005G072000' => 'pvu', 'Phvul.006G164800' => 'pvu', 'Phvul.006G185100' => 'pvu', 'Phvul.007G090000' => 'pvu', 'Potri.001G399800' => 'ptr', 'Potri.002G149900' => 'ptr', 'Potri.004G044100' => 'ptr', 'Potri.004G177600' => 'ptr', 'Potri.009G138000' => 'ptr', 'Potri.010G094000' => 'ptr', 'Potri.011G053000' => 'ptr', 'Potri.011G119300' => 'ptr', 'Potri.013G113700' => 'ptr', 'Potri.018G107800' => 'ptr', 'Potri.019G084100' => 'ptr', 'Pp3c14_23720' => 'ppa', 'Pp3c16_6340' => 'ppa', 'Pp3c23_13420' => 'ppa', 'Pp3c24_2740' => 'ppa', 'Pp3c25_860' => 'ppa', 'Pp3c8_21750' => 'ppa', 'Prupe.1G273000' => 'ppe', 'Prupe.1G273700' => 'ppe', 'Prupe.1G274100' => 'ppe', 'Prupe.2G023300' => 'ppe', 'Prupe.4G048000' => 'ppe', 'Prupe.4G080400' => 'ppe', 'Prupe.4G181200' => 'ppe', 'Prupe.8G056900' => 'ppe', 'Prupe.8G168700' => 'ppe', 'Psat1g189080' => 'psa', 'Psat1g204760' => 'psa', 'Psat4g175560' => 'psa', 'Psat4g177720' => 'psa', 'Psat5g244240' => 'psa', 'Psat6g010720' => 'psa', 'Psat6g187200' => 'psa', 'Psat7g072040' => 'psa', 'PSO017G3501' => 'pso', 'PSO063G2148' => 'pso', 'PSO063G5608' => 'pso', 'PSO210G6392' => 'pso', 'PSO541G2319' => 'pso', 'PSO541G2836' => 'pso', 'PSO541G4012' => 'pso', 'PSO541G6253' => 'pso', 'PSO675G0580' => 'pso', 'PSO675G0856' => 'pso', 'PSO675G5635' => 'pso', 'PSO675G9157' => 'pso', 'PSO832G1660' => 'pso', 'PSO832G1969' => 'pso', 'QL02p007186' => 'qlo', 'QL02p033904' => 'qlo', 'QL03p064391' => 'qlo', 'QL05p040593' => 'qlo', 'QL05p058242' => 'qlo', 'QL08p021825' => 'qlo', 'QL11p004981' => 'qlo', 'RcHm_v2.0_Chr1g0318301' => 'rch', 'RcHm_v2.0_Chr4g0418501' => 'rch', 'RcHm_v2.0_Chr4g0439971' => 'rch', 'RcHm_v2.0_Chr5g0008541' => 'rch', 'RcHm_v2.0_Chr5g0014101' => 'rch', 'RcHm_v2.0_Chr5g0014131' => 'rch', 'RcHm_v2.0_Chr5g0033621' => 'rch', 'RcHm_v2.0_Chr6g0272041' => 'rch', 'RcHm_v2.0_Chr6g0278831' => 'rch', 'Rhsim02G0130400' => 'rsi', 'Rhsim02G0171100' => 'rsi', 'Rhsim05G0053000' => 'rsi', 'Rhsim05G0053100' => 'rsi', 'Rhsim06G0096500' => 'rsi', 'Rhsim06G0096600' => 'rsi', 'Rhsim06G0199100' => 'rsi', 'Rhsim12G0062300' => 'rsi', 'Rhsim12G0062800' => 'rsi', 'Sabra02G0118600' => 'sbr', 'Sabra04G0027300' => 'sbr', 'Sabra04G0119500' => 'sbr', 'Sabra08G0112500' => 'sbr', 'Sabra11G0036800' => 'sbr', 'Sabra11G0103800' => 'sbr', 'Sabra13G0096300' => 'sbr', 'Sabra16G0262300' => 'sbr', 'Sabra18G0091700' => 'sbr', 'Sabra19G0095400' => 'sbr', 'SalBow6G3080' => 'sbo', 'SalBow7G1157' => 'sbo', 'SalBow7G2123' => 'sbo', 'SalBow7G2285' => 'sbo', 'SalBow7G3537' => 'sbo', 'SalBow8G2947' => 'sbo', 'SalBow8G4463' => 'sbo', 'SalBow8G5466' => 'sbo', 'Sc01g0001750' => 'sci', 'Sc02g0006640' => 'sci', 'Sc02g0006670' => 'sci', 'Sc04g0008220' => 'sci', 'Sc05g0006190' => 'sci', 'Sc08g0002760' => 'sci', 'Sc17g0006170' => 'sci', 'Sc22g0002050' => 'sci', 'Sc23g0001190' => 'sci', 'Sc24g0000980' => 'sci', 'Sed0006245' => 'sed', 'Sed0007543' => 'sed', 'Sed0009411' => 'sed', 'Sed0010765' => 'sed', 'Sed0012944' => 'sed', 'Sed0014682' => 'sed', 'Sed0016174' => 'sed', 'Sed0016796' => 'sed', 'Sed0020317' => 'sed', 'Sed0021467' => 'sed', 'SEGI_01316' => 'sgi', 'SEGI_03374' => 'sgi', 'SEGI_16265' => 'sgi', 'SEGI_18569' => 'sgi', 'SEGI_20351' => 'sgi', 'SEGI_26395' => 'sgi', 'SEGI_29469' => 'sgi', 'SEGI_34771' => 'sgi', 'SEGI_36769' => 'sgi', 'SEGI_37139' => 'sgi', 'SGA_v2.0_scaffold100G29687' => 'sas', 'SGA_v2.0_scaffold118G32472' => 'sas', 'SGA_v2.0_scaffold14G07051' => 'sas', 'SGA_v2.0_scaffold183G39845' => 'sas', 'SGA_v2.0_scaffold1G00174' => 'sas', 'SGA_v2.0_scaffold22G09714' => 'sas', 'SGA_v2.0_scaffold333G48992' => 'sas', 'SGA_v2.0_scaffold46G17491' => 'sas', 'SGA_v2.0_scaffold49G18294' => 'sas', 'SGA_v2.0_scaffold63G21658' => 'sas', 'SHI01741' => 'shi', 'SHI05771' => 'shi', 'SHI18077' => 'shi', 'SHI20525' => 'shi', 'SHI20527' => 'shi', 'SHI20528' => 'shi', 'SMO172G0185' => 'smo', 'SMO198G0020' => 'smo', 'SMO351G0006' => 'smo', 'SMO356G0118' => 'smo', 'SMO358G0296' => 'smo', 'SMO367G0079' => 'smo', 'SMO367G1277' => 'smo', 'Solyc01g014220.3' => 'sly', 'Solyc01g111770.2' => 'sly', 'Solyc02g078180.3' => 'sly', 'Solyc03g006430.3' => 'sly', 'Solyc03g006456.1' => 'sly', 'Solyc03g079860.2' => 'sly', 'Solyc04g079770.3' => 'sly', 'Solyc05g007430.4' => 'sly', 'Solyc07g063150.3' => 'sly', 'Solyc08g016620.3' => 'sly', 'Solyc09g057590.3' => 'sly', 'Solyc09g057600.1' => 'sly', 'Solyc10g009050.3' => 'sly', 'Solyc11g017420.2' => 'sly', 'Sopen01g053810' => 'spe', 'Sopen02g023040' => 'spe', 'Sopen03g002440' => 'spe', 'Sopen04g033350' => 'spe', 'Sopen05g003310' => 'spe', 'Sopen07g004050' => 'spe', 'Sopen07g031340' => 'spe', 'Sopen08g006990' => 'spe', 'Sopen10g004830' => 'spe', 'Sopen11g009370' => 'spe', 'Sp1g24450' => 'spa', 'Sp1g29670' => 'spa', 'Sp1g39600' => 'spa', 'Sp2g11080' => 'spa', 'Sp2g13970' => 'spa', 'Sp4g16130' => 'spa', 'Sp6g13080' => 'spa', 'Sp7g37270' => 'spa', 'TAR371G0065' => 'tar', 'TAR376G0340' => 'tar', 'TAR376G0435' => 'tar', 'TAR381G0002' => 'tar', 'TAR381G1236' => 'tar', 'TAR624G0055' => 'tar', 'TAR624G0324' => 'tar', 'TAR624G0696' => 'tar', 'TAR624G0906' => 'tar', 'TAR625G0107' => 'tar', 'TAR626G0015' => 'tar', 'TAR626G1356' => 'tar', 'TAR627G0888' => 'tar', 'TAR628G0399' => 'tar', 'TAR628G1327' => 'tar', 'TAR629G2831' => 'tar', 'TAR629G2874' => 'tar', 'TAR633G1432' => 'tar', 'TAR633G2771' => 'tar', 'THA.LOC104803394' => 'tha', 'THA.LOC104805153' => 'tha', 'THA.LOC104806784' => 'tha', 'THA.LOC104810473' => 'tha', 'THA.LOC104813100' => 'tha', 'THA.LOC104814215' => 'tha', 'THA.LOC104815554' => 'tha', 'THA.LOC104820544' => 'tha', 'THA.LOC104824754' => 'tha', 'THA.LOC104827717' => 'tha', 'Thecc.02G031400' => 'tca', 'Thecc.02G055900' => 'tca', 'Thecc.02G350800' => 'tca', 'Thecc.06G150900' => 'tca', 'Thecc.06G186600' => 'tca', 'Thecc.07G089600' => 'tca', 'Thecc.08G020400' => 'tca', 'Thecc.08G182100' => 'tca', 'Thhalv10000873m.g' => 'esa', 'Thhalv10004185m.g' => 'esa', 'Thhalv10006981m.g' => 'esa', 'Thhalv10007204m.g' => 'esa', 'Thhalv10011374m.g' => 'esa', 'Thhalv10013482m.g' => 'esa', 'Thhalv10017801m.g' => 'esa', 'Thhalv10024983m.g' => 'esa', 'TPR.G12072' => 'tpr', 'TPR.G15769' => 'tpr', 'TPR.G16504' => 'tpr', 'TPR.G16506' => 'tpr', 'TPR.G24345' => 'tpr', 'TPR.G26666' => 'tpr', 'TPR.G27320' => 'tpr', 'TPR.G31819' => 'tpr', 'TPR.G38879' => 'tpr', 'TPR.G39015' => 'tpr', 'TPR.G8819' => 'tpr', 'TWI09G0924' => 'twi', 'TWI12G0811' => 'twi', 'TWI12G1294' => 'twi', 'TWI31G0150' => 'twi', 'TWI36G1262' => 'twi', 'TWI38G1287' => 'twi', 'TWI38G1633' => 'twi', 'TWI38G1982' => 'twi', 'TWI39G0116' => 'twi', 'TWI60G1011' => 'twi', 'TWI63G0171' => 'twi', 'TWI73G0839' => 'twi', 'TWI79G1511' => 'twi', 'unitig_0.g915' => 'ugi', 'unitig_0.g916' => 'ugi', 'unitig_21.g20219' => 'ugi', 'unitig_21.g20416' => 'ugi', 'unitig_578.g16132' => 'ugi', 'unitig_578.g16718' => 'ugi', 'unitig_62.g23481' => 'ugi', 'unitig_744.g24535' => 'ugi', 'unitig_749.g13525' => 'ugi', 'vmacro01248' => 'vma', 'vmacro02290' => 'vma', 'vmacro10946' => 'vma', 'vmacro11865' => 'vma', 'vmacro12493' => 'vma', 'vmacro17322' => 'vma', 'vmacro21599' => 'vma', 'vmacro23041' => 'vma', 'VMungo0251G0004' => 'vmu', 'VMungo0251G2639' => 'vmu', 'VMungo0251G2967' => 'vmu', 'VMungo0540G0864' => 'vmu', 'VMungo0540G1569' => 'vmu', 'VMungo0647G0317' => 'vmu', 'VMungo0720G1373' => 'vmu', 'VMungo0720G1508' => 'vmu', 'VMungo1080G0485' => 'vmu', 'VMungo1215G3177' => 'vmu', 'Zm00001eb112600' => 'zma', 'Zm00001eb120220' => 'zma', 'Zm00001eb153240' => 'zma', 'Zm00001eb168880' => 'zma', 'Zm00001eb213920' => 'zma', 'Zm00001eb228280' => 'zma', 'Zm00001eb254580' => 'zma', 'Zm00001eb272180' => 'zma', 'Zm00001eb293190' => 'zma', 'Zm00001eb322930' => 'zma', 'Zm00001eb353360' => 'zma', 'Zm00001eb353390' => 'zma', 'Zm00001eb353430' => 'zma', 'Zm00001eb353440' => 'zma', 'Zm00001eb353780' => 'zma' ), 'gf_id' => 'HOM05D000499', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000499' ), 'data_identifier' => 'HOM05D000499', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000499', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1066', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p29780' => 'bna', 'A02p33180' => 'bna', 'A03p16470' => 'bna', 'A03p66010' => 'bna', 'A04p25970' => 'bna', 'A06p01270' => 'bna', 'A06p46080' => 'bna', 'A07p11400' => 'bna', 'A08p01840' => 'bna', 'A08p08230' => 'bna', 'A08p25740' => 'bna', 'A09p32070' => 'bna', 'A09p37830' => 'bna', 'A09p42840' => 'bna', 'A09p42850' => 'bna', 'Aa31LG10G2060' => 'aar', 'Aa31LG2G7410' => 'aar', 'Aa31LG6G10200' => 'aar', 'Aa31LG6G16680' => 'aar', 'Aa31LG6G8470' => 'aar', 'Aa31LG9G12730' => 'aar', 'Aa31LG9G13680' => 'aar', 'Aa31LG9G14920' => 'aar', 'Aa31LG9G6650' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4977' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5467' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3254' => 'aag', 'Actinidia02578' => 'ach', 'Actinidia07693' => 'ach', 'Actinidia08413' => 'ach', 'Actinidia08414' => 'ach', 'Actinidia15289' => 'ach', 'Actinidia19871' => 'ach', 'Actinidia21475' => 'ach', 'Actinidia22576' => 'ach', 'Actinidia28327' => 'ach', 'Actinidia32491' => 'ach', 'Actinidia39463' => 'ach', 'Actinidia39571' => 'ach', 'Ah.01g013750' => 'amhyb', 'Ah.01g023210' => 'amhyb', 'Ah.04g164850' => 'amhyb', 'Ah.05g178060' => 'amhyb', 'Ah.07g204270' => 'amhyb', 'Ah.07g208480' => 'amhyb', 'Ah.09g237410' => 'amhyb', 'Ah.14g089460' => 'amhyb', 'AL1G41790' => 'aly', 'AL1G49050' => 'aly', 'AL1G53810' => 'aly', 'AL1G61400' => 'aly', 'AL4G18580' => 'aly', 'AL5G12510' => 'aly', 'AL5G12540' => 'aly', 'AL6G43230' => 'aly', 'AL7G10370' => 'aly', 'AL7G19250' => 'aly', 'AL8G12240' => 'aly', 'AL8G18540' => 'aly', 'Aqoxy1G02409' => 'aox', 'Aqoxy2G03993' => 'aox', 'Aqoxy3G03357' => 'aox', 'Aqoxy4G00785' => 'aox', 'Aqoxy5G02598' => 'aox', 'Aqoxy6G00132' => 'aox', 'Aqoxy7G01776' => 'aox', 'Aqoxy7G02316' => 'aox', 'Aqoxy7G03973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.12AFKW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B8730' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27IQR1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3F75VG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3RE0GA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41TCQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.527VTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FIR39' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5W8UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DA38EV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ63HS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H1I32C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HC27T5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4M8AP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7N3CZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9UVDZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LS1NQA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT1D4B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SKC4TM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCFV76' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF9Q1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQWD9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1ZM88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WE07RT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YCK7VH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJE6Q6' => 'arhy', 'AT1G28240' => 'ath', 'AT1G34550' => 'ath', 'AT1G53040' => 'ath', 'AT2G02910' => 'ath', 'AT4G09630' => 'ath', 'AT4G38500' => 'ath', 'AT5G42660' => 'ath', 'AT5G46220' => 'ath', 'ATR0152G026' => 'atr', 'ATR0564G343' => 'atr', 'ATR0706G151' => 'atr', 'ATR0733G207' => 'atr', 'ATR0751G234' => 'atr', 'ATR0807G048' => 'atr', 'ATR1091G084' => 'atr', 'Atru.chr10.1229' => 'acertr', 'Atru.chr10.1230' => 'acertr', 'Atru.chr10.1874' => 'acertr', 'Atru.chr11.1808' => 'acertr', 'Atru.chr13.1795' => 'acertr', 'Atru.chr13.570' => 'acertr', 'Atru.chr2.2608' => 'acertr', 'Atru.chr2.2609' => 'acertr', 'Atru.chr5.3428' => 'acertr', 'Atru.chr8.1171' => 'acertr', 'AUR62004651' => 'cqu', 'AUR62008675' => 'cqu', 'AUR62010014' => 'cqu', 'AUR62013004' => 'cqu', 'AUR62014825' => 'cqu', 'AUR62015015' => 'cqu', 'AUR62015151' => 'cqu', 'AUR62017020' => 'cqu', 'AUR62019422' => 'cqu', 'AUR62023570' => 'cqu', 'AUR62025571' => 'cqu', 'AUR62029098' => 'cqu', 'AUR62033863' => 'cqu', 'AUR62034296' => 'cqu', 'AUR62040075' => 'cqu', 'BcaB02g07334' => 'bca', 'BcaB02g10575' => 'bca', 'BcaB03g12119' => 'bca', 'BcaB03g12120' => 'bca', 'BcaB03g13945' => 'bca', 'BcaB04g17123' => 'bca', 'BcaB04g17867' => 'bca', 'BcaB04g19839' => 'bca', 'BcaB07g30317' => 'bca', 'BcaB07g32432' => 'bca', 'BcaB07g33362' => 'bca', 'BcaB08g36611' => 'bca', 'BcaC01g00028' => 'bca', 'BcaC01g01356' => 'bca', 'BcaC01g02034' => 'bca', 'BcaC01g06051' => 'bca', 'BcaC03g16839' => 'bca', 'BcaC03g17176' => 'bca', 'BcaC05g26829' => 'bca', 'BcaC06g31490' => 'bca', 'BcaC06g35344' => 'bca', 'BcaC06g36570' => 'bca', 'BcaC07g37537' => 'bca', 'BcaC08g43491' => 'bca', 'BcaC08g43773' => 'bca', 'BcaNung00234' => 'bca', 'BcaNung01982' => 'bca', 'BcaNung03707' => 'bca', 'BcaNung06454' => 'bca', 'BolC2t10762H' => 'bol', 'BolC2t11191H' => 'bol', 'BolC3t14322H' => 'bol', 'BolC3t19747H' => 'bol', 'BolC3t21425H' => 'bol', 'BolC4t27800H' => 'bol', 'BolC5t31423H' => 'bol', 'BolC6t35951H' => 'bol', 'BolC6t36282H' => 'bol', 'BolC7t40678H' => 'bol', 'BolC7t40679H' => 'bol', 'BolC7t42222H' => 'bol', 'BolC7t43492H' => 'bol', 'BolC7t46785H' => 'bol', 'BolC8t47853H' => 'bol', 'BolC9t56805H' => 'bol', 'BraA02t08000Z' => 'bra', 'BraA02t08341Z' => 'bra', 'BraA03t10936Z' => 'bra', 'BraA03t15657Z' => 'bra', 'BraA04t18100Z' => 'bra', 'BraA05t20523Z' => 'bra', 'BraA06t23353Z' => 'bra', 'BraA06t27473Z' => 'bra', 'BraA06t27769Z' => 'bra', 'BraA07t28928Z' => 'bra', 'BraA08t32236Z' => 'bra', 'BraA08t32841Z' => 'bra', 'BraA08t34524Z' => 'bra', 'BraA09t38742Z' => 'bra', 'BraA09t39295Z' => 'bra', 'C02p47180' => 'bna', 'C02p50990' => 'bna', 'C03p19360' => 'bna', 'C03p74950' => 'bna', 'C03p91000' => 'bna', 'C04p63260' => 'bna', 'C05p27050' => 'bna', 'C06p08750' => 'bna', 'C06p11490' => 'bna', 'C07p02820' => 'bna', 'C07p17180' => 'bna', 'C07p29440' => 'bna', 'C07p63730' => 'bna', 'C09p39260' => 'bna', 'CAN.G1164.34' => 'can', 'CAN.G1164.39' => 'can', 'CAN.G1530.3' => 'can', 'CAN.G162.61' => 'can', 'CAN.G176.6' => 'can', 'CAN.G289.49' => 'can', 'CAN.G370.21' => 'can', 'CAN.G370.22' => 'can', 'CAN.G371.117' => 'can', 'CAN.G58.37' => 'can', 'CAN.G588.98' => 'can', 'CANSAT21G2266' => 'cansat', 'CANSAT25G2799' => 'cansat', 'CANSAT35G0862' => 'cansat', 'CANSAT35G1704' => 'cansat', 'CANSAT35G1760' => 'cansat', 'CANSAT56G3971' => 'cansat', 'CANSAT56G4116' => 'cansat', 'CANSAT80G1259' => 'cansat', 'CARHR027730' => 'chi', 'CARHR033880' => 'chi', 'CARHR043270' => 'chi', 'CARHR145330' => 'chi', 'CARHR145340' => 'chi', 'CARHR175570' => 'chi', 'CARHR181570' => 'chi', 'CARHR258470' => 'chi', 'CARHR260490' => 'chi', 'CARHR294220' => 'chi', 'Carub.0001s2668' => 'cru', 'Carub.0001s3257' => 'cru', 'Carub.0001s4220' => 'cru', 'Carub.0005s0179' => 'cru', 'Carub.0006s2807' => 'cru', 'Carub.0007s0039' => 'cru', 'Carub.0008s0169' => 'cru', 'Carub.0008s0636' => 'cru', 'Ca_00338_v3' => 'car', 'Ca_00542_v3' => 'car', 'Ca_01844_v3' => 'car', 'Ca_10611_v3' => 'car', 'Ca_13326_v3' => 'car', 'Ca_17944_v3' => 'car', 'Ca_18546_v3' => 'car', 'Ca_24219_v3' => 'car', 'Ca_29972_v3' => 'car', 'CBR_g3681' => 'cbr', 'CBR_g40021' => 'cbr', 'Cc01_g08140' => 'ccan', 'Cc02_g13410' => 'ccan', 'Cc02_g37480' => 'ccan', 'Cc05_g12030' => 'ccan', 'Cc09_g03370' => 'ccan', 'Cc09_g10300' => 'ccan', 'Cc10_g03530' => 'ccan', 'Cc10_g11380' => 'ccan', 'CDE01G0176' => 'cde', 'CDE02G0675' => 'cde', 'CDE02G0942' => 'cde', 'CDE02G1153' => 'cde', 'CDE02G4177' => 'cde', 'CDE04G2117' => 'cde', 'CDE04G2736' => 'cde', 'CDE08G1161' => 'cde', 'CDE09G1238' => 'cde', 'Cfa000467' => 'cfa', 'Cfa000947' => 'cfa', 'Cfa004969' => 'cfa', 'Cfa005284' => 'cfa', 'Cfa008993' => 'cfa', 'Cfa018187' => 'cfa', 'Cfa018454' => 'cfa', 'Cfa020585' => 'cfa', 'Ciclev10000424m.g' => 'ccl', 'Ciclev10003605m.g' => 'ccl', 'Ciclev10007828m.g' => 'ccl', 'Ciclev10014620m.g' => 'ccl', 'Ciclev10015169m.g' => 'ccl', 'Ciclev10018291m.g' => 'ccl', 'Ciclev10028256m.g' => 'ccl', 'Ciclev10033822m.g' => 'ccl', 'CiPaw.05G060300' => 'cil', 'CiPaw.05G085000' => 'cil', 'CiPaw.06G083700' => 'cil', 'CiPaw.06G120300' => 'cil', 'CiPaw.09G060500' => 'cil', 'CiPaw.09G123800' => 'cil', 'CiPaw.11G169700' => 'cil', 'CiPaw.12G118300' => 'cil', 'CiPaw.15G071000' => 'cil', 'CiPaw.15G081900' => 'cil', 'ClCG01G024610' => 'cla', 'ClCG03G006070' => 'cla', 'ClCG05G019250' => 'cla', 'ClCG09G009500' => 'cla', 'ClCG11G008200' => 'cla', 'ClCG11G018080' => 'cla', 'COL.COLO4_17373' => 'col', 'COL.COLO4_22994' => 'col', 'COL.COLO4_26389' => 'col', 'COL.COLO4_27170' => 'col', 'COL.COLO4_31074' => 'col', 'COL.COLO4_31465' => 'col', 'COL.COLO4_36438' => 'col', 'COL.COLO4_36439' => 'col', 'Cpa.g.c38781' => 'cpa', 'Cpa.g.sc128.12' => 'cpa', 'Cpa.g.sc166.7' => 'cpa', 'Cpa.g.sc166.8' => 'cpa', 'Cpa.g.sc20.111' => 'cpa', 'Cpa.g.sc27.31' => 'cpa', 'Cpa.g.sc64.36' => 'cpa', 'Cpa.g.sc64.37' => 'cpa', 'Cpa.g.sc66.49' => 'cpa', 'Cpa.g.sc80.64' => 'cpa', 'CsaV3_1G012320' => 'csa', 'CsaV3_2G008480' => 'csa', 'CsaV3_2G033450' => 'csa', 'CsaV3_3G044830' => 'csa', 'CsaV3_4G033710' => 'csa', 'CsaV3_6G051730' => 'csa', 'CsaV3_7G025350' => 'csa', 'CSS0001067' => 'camsi', 'CSS0005996' => 'camsi', 'CSS0006590' => 'camsi', 'CSS0009673' => 'camsi', 'CSS0010201' => 'camsi', 'CSS0010549' => 'camsi', 'CSS0011364' => 'camsi', 'CSS0014473' => 'camsi', 'CSS0014961' => 'camsi', 'CSS0020191' => 'camsi', 'CSS0021165' => 'camsi', 'CSS0022306' => 'camsi', 'CSS0030591' => 'camsi', 'CSS0030696' => 'camsi', 'CSS0032653' => 'camsi', 'CSS0037487' => 'camsi', 'CSS0041102' => 'camsi', 'CSS0041261' => 'camsi', 'CSS0046246' => 'camsi', 'CSS0049256' => 'camsi', 'DCAR_004075' => 'dca', 'DCAR_011538' => 'dca', 'DCAR_019553' => 'dca', 'DCAR_020952' => 'dca', 'DCAR_021739' => 'dca', 'DCAR_027407' => 'dca', 'DCAR_027913' => 'dca', 'DCAR_028066' => 'dca', 'Dinv05899' => 'din', 'Dinv07563' => 'din', 'Dinv08010' => 'din', 'Dinv14125' => 'din', 'Dinv20172' => 'din', 'Dinv30743' => 'din', 'Dinv31229' => 'din', 'Dinv34162' => 'din', 'Dinv36028' => 'din', 'Dinv39368' => 'din', 'Dinv40565' => 'din', 'Dinv41706' => 'din', 'Duzib052G0089' => 'dzi', 'Duzib116G0641' => 'dzi', 'Duzib132G0069' => 'dzi', 'Duzib132G1219' => 'dzi', 'Duzib147G0278' => 'dzi', 'Duzib160G0480' => 'dzi', 'Duzib170G0661' => 'dzi', 'Duzib177G0591' => 'dzi', 'Duzib187G1353' => 'dzi', 'Duzib192G0858' => 'dzi', 'Duzib192G0883' => 'dzi', 'Duzib213G0506' => 'dzi', 'Duzib235G0289' => 'dzi', 'Duzib251G0422' => 'dzi', 'ECA232G3898' => 'eca', 'ECA233G5950' => 'eca', 'ECA234G1699' => 'eca', 'ECA234G2421' => 'eca', 'ECA236G0426' => 'eca', 'ECA236G4331' => 'eca', 'ECA248G2573' => 'eca', 'EL10Ac1g00077' => 'bvu', 'EL10Ac1g01746' => 'bvu', 'EL10Ac2g03464' => 'bvu', 'EL10Ac4g08176' => 'bvu', 'EL10Ac7g17521' => 'bvu', 'EL10Ac8g20386' => 'bvu', 'EL10Ac9g21343' => 'bvu', 'EL10Ac9g22688' => 'bvu', 'Eucgr.B03434' => 'egr', 'Eucgr.D00618' => 'egr', 'Eucgr.E02395' => 'egr', 'Eucgr.F01129' => 'egr', 'Eucgr.F02622' => 'egr', 'Eucgr.F04207' => 'egr', 'FAN01G0570' => 'fan', 'FAN03G3351' => 'fan', 'FAN06G3702' => 'fan', 'FAN07G2149' => 'fan', 'FAN10G3758' => 'fan', 'FAN11G1170' => 'fan', 'FAN11G2050' => 'fan', 'FAN11G2724' => 'fan', 'FAN12G1700' => 'fan', 'FAN12G2028' => 'fan', 'FAN15G1160' => 'fan', 'FAN15G3063' => 'fan', 'FAN16G2540' => 'fan', 'FAN16G3077' => 'fan', 'FAN16G3624' => 'fan', 'FAN17G0221' => 'fan', 'FAN20G2492' => 'fan', 'FAN20G2905' => 'fan', 'FAN21G0548' => 'fan', 'FAN21G1300' => 'fan', 'FAN22G0077' => 'fan', 'FAN22G1315' => 'fan', 'FAN24G1280' => 'fan', 'FAN24G1445' => 'fan', 'FAN24G3527' => 'fan', 'FAN25G0464' => 'fan', 'FAN25G2885' => 'fan', 'FAN25G3270' => 'fan', 'FAN27G1101' => 'fan', 'FAN27G2846' => 'fan', 'FAN27G3524' => 'fan', 'FvH4_2g11770' => 'fve', 'FvH4_2g15630' => 'fve', 'FvH4_3g05570' => 'fve', 'FvH4_3g09110' => 'fve', 'FvH4_3g19940' => 'fve', 'FvH4_4g04821' => 'fve', 'FvH4_4g31480' => 'fve', 'FvH4_7g01740' => 'fve', 'Glyma.05G130400' => 'gma', 'Glyma.05G156400' => 'gma', 'Glyma.07G197000' => 'gma', 'Glyma.08G085151' => 'gma', 'Glyma.08G114500' => 'gma', 'Glyma.08G300400' => 'gma', 'Glyma.10G215800' => 'gma', 'Glyma.12G224400' => 'gma', 'Glyma.13G179300' => 'gma', 'Glyma.13G218151' => 'gma', 'Glyma.13G238800' => 'gma', 'Glyma.13G276900' => 'gma', 'Glyma.14G078200' => 'gma', 'Glyma.15G074500' => 'gma', 'Glyma.15G094100' => 'gma', 'Glyma.17G247200' => 'gma', 'Glyma.18G120100' => 'gma', 'Glyma.20G176000' => 'gma', 'Gohir.A01G063600' => 'ghi', 'Gohir.A01G170301' => 'ghi', 'Gohir.A02G060500' => 'ghi', 'Gohir.A05G133850' => 'ghi', 'Gohir.A05G161400' => 'ghi', 'Gohir.A06G012900' => 'ghi', 'Gohir.A06G035901' => 'ghi', 'Gohir.A06G127100' => 'ghi', 'Gohir.A06G210500' => 'ghi', 'Gohir.A08G008650' => 'ghi', 'Gohir.A09G072700' => 'ghi', 'Gohir.A09G088301' => 'ghi', 'Gohir.A10G040600' => 'ghi', 'Gohir.A12G036300' => 'ghi', 'Gohir.A12G143350' => 'ghi', 'Gohir.A12G165500' => 'ghi', 'Gohir.A13G145700' => 'ghi', 'Gohir.D01G050000' => 'ghi', 'Gohir.D01G051366' => 'ghi', 'Gohir.D01G161350' => 'ghi', 'Gohir.D02G065900' => 'ghi', 'Gohir.D05G164200' => 'ghi', 'Gohir.D05G355500' => 'ghi', 'Gohir.D06G010400' => 'ghi', 'Gohir.D06G111250' => 'ghi', 'Gohir.D06G132000' => 'ghi', 'Gohir.D06G210500' => 'ghi', 'Gohir.D07G165675' => 'ghi', 'Gohir.D08G062240' => 'ghi', 'Gohir.D08G086101' => 'ghi', 'Gohir.D08G138060' => 'ghi', 'Gohir.D09G072300' => 'ghi', 'Gohir.D10G041400' => 'ghi', 'Gohir.D11G191020' => 'ghi', 'Gohir.D11G212066' => 'ghi', 'Gohir.D12G036300' => 'ghi', 'Gohir.D12G168600' => 'ghi', 'Gohir.D13G150600' => 'ghi', 'Gorai.001G057300' => 'gra', 'Gorai.002G069900' => 'gra', 'Gorai.002G200000' => 'gra', 'Gorai.003G067600' => 'gra', 'Gorai.005G074800' => 'gra', 'Gorai.006G087300' => 'gra', 'Gorai.008G037500' => 'gra', 'Gorai.008G181400' => 'gra', 'Gorai.009G169400' => 'gra', 'Gorai.009G387900' => 'gra', 'Gorai.010G013300' => 'gra', 'Gorai.010G153800' => 'gra', 'Gorai.010G255800' => 'gra', 'Gorai.011G043700' => 'gra', 'Gorai.011G198900' => 'gra', 'Gorai.013G168400' => 'gra', 'GSVIVG01005212001' => 'vvi', 'GSVIVG01006163001' => 'vvi', 'GSVIVG01009625001' => 'vvi', 'GSVIVG01014338001' => 'vvi', 'GSVIVG01020005001' => 'vvi', 'GSVIVG01021450001' => 'vvi', 'GSVIVG01023975001' => 'vvi', 'GSVIVG01034490001' => 'vvi', 'HanXRQChr04g0112071' => 'han', 'HanXRQChr05g0131151' => 'han', 'HanXRQChr09g0262371' => 'han', 'HanXRQChr09g0268401' => 'han', 'HanXRQChr10g0279241' => 'han', 'HanXRQChr10g0297961' => 'han', 'HanXRQChr11g0326231' => 'han', 'HanXRQChr11g0328471' => 'han', 'HanXRQChr16g0507941' => 'han', 'HanXRQChr17g0560211' => 'han', 'Haze_02108' => 'cav', 'Haze_02428' => 'cav', 'Haze_05593' => 'cav', 'Haze_06448' => 'cav', 'Haze_09427' => 'cav', 'Haze_12022' => 'cav', 'Haze_17612' => 'cav', 'Haze_17928' => 'cav', 'Hma1.2p1_0032F.1_g019250' => 'hma', 'Hma1.2p1_0163F.1_g072690' => 'hma', 'Hma1.2p1_0265F.1_g106710' => 'hma', 'Hma1.2p1_0286F.1_g113970' => 'hma', 'Hma1.2p1_0363F.1_g136640' => 'hma', 'Hma1.2p1_0584F.1_g183470' => 'hma', 'Hma1.2p1_0885F.1_g232570' => 'hma', 'HPP92_006022' => 'vpl', 'HPP92_007320' => 'vpl', 'HPP92_011521' => 'vpl', 'HPP92_019387' => 'vpl', 'HPP92_024038' => 'vpl', 'Hund05891' => 'sun', 'Hund06450' => 'sun', 'Hund12053' => 'sun', 'Hund16800' => 'sun', 'Hund21222' => 'sun', 'Hund22896' => 'sun', 'Hund23746' => 'sun', 'Hund27083' => 'sun', 'Lalb_Chr02g0141831' => 'lal', 'Lalb_Chr02g0141841' => 'lal', 'Lalb_Chr05g0220411' => 'lal', 'Lalb_Chr06g0162081' => 'lal', 'Lalb_Chr09g0327651' => 'lal', 'Lalb_Chr13g0295051' => 'lal', 'Lalb_Chr15g0086801' => 'lal', 'Lalb_Chr16g0383781' => 'lal', 'Lalb_Chr16g0383791' => 'lal', 'Lalb_Chr18g0055441' => 'lal', 'Lalb_Chr18g0059611' => 'lal', 'Lalb_Chr20g0109661' => 'lal', 'Lalb_Chr20g0109831' => 'lal', 'Lalb_Chr20g0121871' => 'lal', 'Lalb_Chr22g0355361' => 'lal', 'Lalb_Chr25g0286371' => 'lal', 'Lj1A1187G43' => 'lonja', 'Lj1A1205T50' => 'lonja', 'Lj1A800G33' => 'lonja', 'Lj1C1187T7' => 'lonja', 'Lj1C843T11' => 'lonja', 'Lj1g0010940' => 'lja', 'Lj2A288T69' => 'lonja', 'Lj3g0024276' => 'lja', 'Lj4A47T76' => 'lonja', 'Lj4g0005805' => 'lja', 'Lj4g0006097' => 'lja', 'Lj4g0008528' => 'lja', 'Lj4g0024907' => 'lja', 'Lj5g0012472' => 'lja', 'Lj5g0018648' => 'lja', 'Lj6C789G1' => 'lonja', 'Lj6g0004000' => 'lja', 'Lj7A292G67' => 'lonja', 'Lj7A292T64' => 'lonja', 'Lj9A400T58' => 'lonja', 'Lsat_1_v5_gn_1_126181' => 'lsa', 'Lsat_1_v5_gn_4_123041' => 'lsa', 'Lsat_1_v5_gn_4_133620' => 'lsa', 'Lsat_1_v5_gn_4_53221' => 'lsa', 'Lsat_1_v5_gn_4_71961' => 'lsa', 'Lsat_1_v5_gn_7_105241' => 'lsa', 'Lsat_1_v5_gn_7_21361' => 'lsa', 'Lsat_1_v5_gn_7_28860' => 'lsa', 'Lsat_1_v5_gn_7_31260' => 'lsa', 'Lsat_1_v5_gn_8_52801' => 'lsa', 'Manes.02G191400' => 'mes', 'Manes.03G110100' => 'mes', 'Manes.04G071100' => 'mes', 'Manes.05G100500' => 'mes', 'Manes.05G164700' => 'mes', 'Manes.15G087000' => 'mes', 'Manes.15G121500' => 'mes', 'Manes.16G028300' => 'mes', 'Manes.17G046100' => 'mes', 'Manes.17G069800' => 'mes', 'Manes.18G100500' => 'mes', 'Mapoly0002s0109' => 'mpo', 'Mapoly0024s0007' => 'mpo', 'Mapoly0089s0032' => 'mpo', 'MBI04_g42241_MAGBIO' => 'mbi', 'MBI05_g11988_MAGBIO' => 'mbi', 'MBI05_g35452_MAGBIO' => 'mbi', 'MBI07_g30179_MAGBIO' => 'mbi', 'MBI07_g35859_MAGBIO' => 'mbi', 'MBI07_g35860_MAGBIO' => 'mbi', 'MBI07_g37166_MAGBIO' => 'mbi', 'MBI08_g18172_MAGBIO' => 'mbi', 'MBI09_g08441_MAGBIO' => 'mbi', 'MBI13_g01676_MAGBIO' => 'mbi', 'MBI14_g42955_MAGBIO' => 'mbi', 'MBI16_g13161_MAGBIO' => 'mbi', 'MBI17_g27204_MAGBIO' => 'mbi', 'MBI19_g21595_MAGBIO' => 'mbi', 'MD00G1148400' => 'mdo', 'MD02G1301200' => 'mdo', 'MD03G1227800' => 'mdo', 'MD05G1041100' => 'mdo', 'MD05G1124800' => 'mdo', 'MD05G1284000' => 'mdo', 'MD05G1338800' => 'mdo', 'MD05G1338900' => 'mdo', 'MD07G1022800' => 'mdo', 'MD10G1047500' => 'mdo', 'MD10G1127500' => 'mdo', 'MD10G1262300' => 'mdo', 'MD10G1293800' => 'mdo', 'MD16G1074300' => 'mdo', 'Medtr1g021670' => 'mtr', 'Medtr1g096320' => 'mtr', 'Medtr2g013690' => 'mtr', 'Medtr2g019450' => 'mtr', 'Medtr2g085170' => 'mtr', 'Medtr4g088785' => 'mtr', 'Medtr8g055930' => 'mtr', 'Medtr8g085850' => 'mtr', 'MELO3C002605.2' => 'cme', 'MELO3C003891.2' => 'cme', 'MELO3C004012.2' => 'cme', 'MELO3C007134.2' => 'cme', 'MELO3C008118.2' => 'cme', 'MELO3C016700.2' => 'cme', 'MELO3C024127.2' => 'cme', 'MELO3C033361.2' => 'cme', 'MELO3C033362.2' => 'cme', 'Migut.C00430' => 'egut', 'Migut.C01246' => 'egut', 'Migut.E00101' => 'egut', 'Migut.H01486' => 'egut', 'Migut.H01939' => 'egut', 'Migut.K00360' => 'egut', 'Migut.M00910' => 'egut', 'Migut.M01139' => 'egut', 'Migut.N02677' => 'egut', 'MSTRG.13252' => 'ama', 'MSTRG.14701' => 'ama', 'MSTRG.1521' => 'ama', 'MSTRG.15884' => 'ama', 'MSTRG.16242' => 'ama', 'MSTRG.22285' => 'ama', 'MSTRG.22444' => 'ama', 'MSTRG.2349' => 'ama', 'MSTRG.26308' => 'ama', 'MSTRG.28296' => 'ama', 'MSTRG.9895' => 'ama', 'Nitab4.5_0000110g0060' => 'nta', 'Nitab4.5_0000420g0130' => 'nta', 'Nitab4.5_0000422g0030' => 'nta', 'Nitab4.5_0000560g0180' => 'nta', 'Nitab4.5_0000703g0100' => 'nta', 'Nitab4.5_0000786g0200' => 'nta', 'Nitab4.5_0001336g0020' => 'nta', 'Nitab4.5_0001796g0030' => 'nta', 'Nitab4.5_0003348g0060' => 'nta', 'Nitab4.5_0003698g0040' => 'nta', 'Nitab4.5_0003942g0090' => 'nta', 'Nitab4.5_0004775g0070' => 'nta', 'Nitab4.5_0004864g0030' => 'nta', 'Nitab4.5_0005615g0020' => 'nta', 'Nitab4.5_0009288g0030' => 'nta', 'Nitab4.5_0009341g0010' => 'nta', 'Nitab4.5_0009535g0010' => 'nta', 'Nn1g03995' => 'nnu', 'Nn1g04100' => 'nnu', 'Nn1g06530' => 'nnu', 'Nn3g16404' => 'nnu', 'Nn3g17212' => 'nnu', 'Nn3g20776' => 'nnu', 'Nn3g21923' => 'nnu', 'Nn5g27737' => 'nnu', 'Nn5g29461' => 'nnu', 'Nn7g38355' => 'nnu', 'Nn8g39873' => 'nnu', 'Oeu000548.2' => 'oeu', 'Oeu004672.1' => 'oeu', 'Oeu015605.2' => 'oeu', 'Oeu016092.1' => 'oeu', 'Oeu017879.3' => 'oeu', 'Oeu024910.1' => 'oeu', 'Oeu028965.1' => 'oeu', 'Oeu031269.1' => 'oeu', 'Oeu031270.1' => 'oeu', 'Oeu032535.1' => 'oeu', 'Oeu034151.1' => 'oeu', 'Oeu034152.1' => 'oeu', 'Oeu034588.2' => 'oeu', 'Oeu050846.1' => 'oeu', 'Oeu050849.2' => 'oeu', 'Oeu051063.2' => 'oeu', 'Oeu052368.1' => 'oeu', 'Oeu052370.1' => 'oeu', 'Os01g0210400' => 'osa', 'Os01g0304300' => 'osa', 'Os01g0749100' => 'osa', 'Os02g0745800' => 'osa', 'Os03g0769050' => 'osa', 'Os05g0531500' => 'osa', 'Os06g0724300' => 'osa', 'Os11g0198100' => 'osa', 'Peaxi162Scf00069g01425' => 'pax', 'Peaxi162Scf00280g00811' => 'pax', 'Peaxi162Scf00310g00615' => 'pax', 'Peaxi162Scf00362g00542' => 'pax', 'Peaxi162Scf00461g00310' => 'pax', 'Peaxi162Scf00530g00118' => 'pax', 'Peaxi162Scf00541g00057' => 'pax', 'Peaxi162Scf00661g00017' => 'pax', 'Peaxi162Scf00926g00027' => 'pax', 'Peaxi162Scf01064g00263' => 'pax', 'Peaxi162Scf01211g00135' => 'pax', 'PGR004G2336' => 'pgr', 'PGR042G0327' => 'pgr', 'PGR042G1957' => 'pgr', 'PGR042G2003' => 'pgr', 'PGR042G3929' => 'pgr', 'PGR083G1137' => 'pgr', 'PGR083G1364' => 'pgr', 'PGSC0003DMG400003381' => 'stu', 'PGSC0003DMG400003417' => 'stu', 'PGSC0003DMG400008981' => 'stu', 'PGSC0003DMG400012417' => 'stu', 'PGSC0003DMG400012823' => 'stu', 'PGSC0003DMG400016885' => 'stu', 'PGSC0003DMG400022812' => 'stu', 'PGSC0003DMG400029726' => 'stu', 'PGSC0003DMG401009243' => 'stu', 'PGSC0003DMG401031505' => 'stu', 'PGSC0003DMG402031505' => 'stu', 'Phvul.001G017600' => 'pvu', 'Phvul.002G193500' => 'pvu', 'Phvul.002G228900' => 'pvu', 'Phvul.002G236800' => 'pvu', 'Phvul.003G049500' => 'pvu', 'Phvul.005G072000' => 'pvu', 'Phvul.006G164800' => 'pvu', 'Phvul.006G185100' => 'pvu', 'Phvul.007G090000' => 'pvu', 'Potri.001G399800' => 'ptr', 'Potri.002G149900' => 'ptr', 'Potri.004G044100' => 'ptr', 'Potri.004G177600' => 'ptr', 'Potri.009G138000' => 'ptr', 'Potri.010G094000' => 'ptr', 'Potri.011G053000' => 'ptr', 'Potri.011G119300' => 'ptr', 'Potri.013G113700' => 'ptr', 'Potri.018G107800' => 'ptr', 'Potri.019G084100' => 'ptr', 'Pp3c14_23720' => 'ppa', 'Pp3c16_6340' => 'ppa', 'Pp3c23_13420' => 'ppa', 'Pp3c24_2740' => 'ppa', 'Pp3c25_860' => 'ppa', 'Pp3c8_21750' => 'ppa', 'Prupe.1G273000' => 'ppe', 'Prupe.1G273700' => 'ppe', 'Prupe.1G274100' => 'ppe', 'Prupe.2G023300' => 'ppe', 'Prupe.4G048000' => 'ppe', 'Prupe.4G080400' => 'ppe', 'Prupe.4G181200' => 'ppe', 'Prupe.8G056900' => 'ppe', 'Prupe.8G168700' => 'ppe', 'Psat1g189080' => 'psa', 'Psat1g204760' => 'psa', 'Psat4g175560' => 'psa', 'Psat4g177720' => 'psa', 'Psat5g244240' => 'psa', 'Psat6g010720' => 'psa', 'Psat6g187200' => 'psa', 'Psat7g072040' => 'psa', 'PSO017G3501' => 'pso', 'PSO063G2148' => 'pso', 'PSO063G5608' => 'pso', 'PSO210G6392' => 'pso', 'PSO541G2319' => 'pso', 'PSO541G2836' => 'pso', 'PSO541G4012' => 'pso', 'PSO541G6253' => 'pso', 'PSO675G0580' => 'pso', 'PSO675G0856' => 'pso', 'PSO675G5635' => 'pso', 'PSO675G9157' => 'pso', 'PSO832G1660' => 'pso', 'PSO832G1969' => 'pso', 'QL02p007186' => 'qlo', 'QL02p033904' => 'qlo', 'QL03p064391' => 'qlo', 'QL05p040593' => 'qlo', 'QL05p058242' => 'qlo', 'QL08p021825' => 'qlo', 'QL11p004981' => 'qlo', 'RcHm_v2.0_Chr1g0318301' => 'rch', 'RcHm_v2.0_Chr4g0418501' => 'rch', 'RcHm_v2.0_Chr4g0439971' => 'rch', 'RcHm_v2.0_Chr5g0008541' => 'rch', 'RcHm_v2.0_Chr5g0014101' => 'rch', 'RcHm_v2.0_Chr5g0014131' => 'rch', 'RcHm_v2.0_Chr5g0033621' => 'rch', 'RcHm_v2.0_Chr6g0272041' => 'rch', 'RcHm_v2.0_Chr6g0278831' => 'rch', 'Rhsim02G0130400' => 'rsi', 'Rhsim02G0171100' => 'rsi', 'Rhsim05G0053000' => 'rsi', 'Rhsim05G0053100' => 'rsi', 'Rhsim06G0096500' => 'rsi', 'Rhsim06G0096600' => 'rsi', 'Rhsim06G0199100' => 'rsi', 'Rhsim12G0062300' => 'rsi', 'Rhsim12G0062800' => 'rsi', 'Sabra02G0118600' => 'sbr', 'Sabra04G0027300' => 'sbr', 'Sabra04G0119500' => 'sbr', 'Sabra08G0112500' => 'sbr', 'Sabra11G0036800' => 'sbr', 'Sabra11G0103800' => 'sbr', 'Sabra13G0096300' => 'sbr', 'Sabra16G0262300' => 'sbr', 'Sabra18G0091700' => 'sbr', 'Sabra19G0095400' => 'sbr', 'SalBow6G3080' => 'sbo', 'SalBow7G1157' => 'sbo', 'SalBow7G2123' => 'sbo', 'SalBow7G2285' => 'sbo', 'SalBow7G3537' => 'sbo', 'SalBow8G2947' => 'sbo', 'SalBow8G4463' => 'sbo', 'SalBow8G5466' => 'sbo', 'Sc01g0001750' => 'sci', 'Sc02g0006640' => 'sci', 'Sc02g0006670' => 'sci', 'Sc04g0008220' => 'sci', 'Sc05g0006190' => 'sci', 'Sc08g0002760' => 'sci', 'Sc17g0006170' => 'sci', 'Sc22g0002050' => 'sci', 'Sc23g0001190' => 'sci', 'Sc24g0000980' => 'sci', 'Sed0006245' => 'sed', 'Sed0007543' => 'sed', 'Sed0009411' => 'sed', 'Sed0010765' => 'sed', 'Sed0012944' => 'sed', 'Sed0014682' => 'sed', 'Sed0016174' => 'sed', 'Sed0016796' => 'sed', 'Sed0020317' => 'sed', 'Sed0021467' => 'sed', 'SEGI_01316' => 'sgi', 'SEGI_03374' => 'sgi', 'SEGI_16265' => 'sgi', 'SEGI_18569' => 'sgi', 'SEGI_20351' => 'sgi', 'SEGI_26395' => 'sgi', 'SEGI_29469' => 'sgi', 'SEGI_34771' => 'sgi', 'SEGI_36769' => 'sgi', 'SEGI_37139' => 'sgi', 'SGA_v2.0_scaffold100G29687' => 'sas', 'SGA_v2.0_scaffold118G32472' => 'sas', 'SGA_v2.0_scaffold14G07051' => 'sas', 'SGA_v2.0_scaffold183G39845' => 'sas', 'SGA_v2.0_scaffold1G00174' => 'sas', 'SGA_v2.0_scaffold22G09714' => 'sas', 'SGA_v2.0_scaffold333G48992' => 'sas', 'SGA_v2.0_scaffold46G17491' => 'sas', 'SGA_v2.0_scaffold49G18294' => 'sas', 'SGA_v2.0_scaffold63G21658' => 'sas', 'SHI01741' => 'shi', 'SHI05771' => 'shi', 'SHI18077' => 'shi', 'SHI20525' => 'shi', 'SHI20527' => 'shi', 'SHI20528' => 'shi', 'SMO172G0185' => 'smo', 'SMO198G0020' => 'smo', 'SMO351G0006' => 'smo', 'SMO356G0118' => 'smo', 'SMO358G0296' => 'smo', 'SMO367G0079' => 'smo', 'SMO367G1277' => 'smo', 'Solyc01g014220.3' => 'sly', 'Solyc01g111770.2' => 'sly', 'Solyc02g078180.3' => 'sly', 'Solyc03g006430.3' => 'sly', 'Solyc03g006456.1' => 'sly', 'Solyc03g079860.2' => 'sly', 'Solyc04g079770.3' => 'sly', 'Solyc05g007430.4' => 'sly', 'Solyc07g063150.3' => 'sly', 'Solyc08g016620.3' => 'sly', 'Solyc09g057590.3' => 'sly', 'Solyc09g057600.1' => 'sly', 'Solyc10g009050.3' => 'sly', 'Solyc11g017420.2' => 'sly', 'Sopen01g053810' => 'spe', 'Sopen02g023040' => 'spe', 'Sopen03g002440' => 'spe', 'Sopen04g033350' => 'spe', 'Sopen05g003310' => 'spe', 'Sopen07g004050' => 'spe', 'Sopen07g031340' => 'spe', 'Sopen08g006990' => 'spe', 'Sopen10g004830' => 'spe', 'Sopen11g009370' => 'spe', 'Sp1g24450' => 'spa', 'Sp1g29670' => 'spa', 'Sp1g39600' => 'spa', 'Sp2g11080' => 'spa', 'Sp2g13970' => 'spa', 'Sp4g16130' => 'spa', 'Sp6g13080' => 'spa', 'Sp7g37270' => 'spa', 'TAR371G0065' => 'tar', 'TAR376G0340' => 'tar', 'TAR376G0435' => 'tar', 'TAR381G0002' => 'tar', 'TAR381G1236' => 'tar', 'TAR624G0055' => 'tar', 'TAR624G0324' => 'tar', 'TAR624G0696' => 'tar', 'TAR624G0906' => 'tar', 'TAR625G0107' => 'tar', 'TAR626G0015' => 'tar', 'TAR626G1356' => 'tar', 'TAR627G0888' => 'tar', 'TAR628G0399' => 'tar', 'TAR628G1327' => 'tar', 'TAR629G2831' => 'tar', 'TAR629G2874' => 'tar', 'TAR633G1432' => 'tar', 'TAR633G2771' => 'tar', 'THA.LOC104803394' => 'tha', 'THA.LOC104805153' => 'tha', 'THA.LOC104806784' => 'tha', 'THA.LOC104810473' => 'tha', 'THA.LOC104813100' => 'tha', 'THA.LOC104814215' => 'tha', 'THA.LOC104815554' => 'tha', 'THA.LOC104820544' => 'tha', 'THA.LOC104824754' => 'tha', 'THA.LOC104827717' => 'tha', 'Thecc.02G031400' => 'tca', 'Thecc.02G055900' => 'tca', 'Thecc.02G350800' => 'tca', 'Thecc.06G150900' => 'tca', 'Thecc.06G186600' => 'tca', 'Thecc.07G089600' => 'tca', 'Thecc.08G020400' => 'tca', 'Thecc.08G182100' => 'tca', 'Thhalv10000873m.g' => 'esa', 'Thhalv10004185m.g' => 'esa', 'Thhalv10006981m.g' => 'esa', 'Thhalv10007204m.g' => 'esa', 'Thhalv10011374m.g' => 'esa', 'Thhalv10013482m.g' => 'esa', 'Thhalv10017801m.g' => 'esa', 'Thhalv10024983m.g' => 'esa', 'TPR.G12072' => 'tpr', 'TPR.G15769' => 'tpr', 'TPR.G16504' => 'tpr', 'TPR.G16506' => 'tpr', 'TPR.G24345' => 'tpr', 'TPR.G26666' => 'tpr', 'TPR.G27320' => 'tpr', 'TPR.G31819' => 'tpr', 'TPR.G38879' => 'tpr', 'TPR.G39015' => 'tpr', 'TPR.G8819' => 'tpr', 'TWI09G0924' => 'twi', 'TWI12G0811' => 'twi', 'TWI12G1294' => 'twi', 'TWI31G0150' => 'twi', 'TWI36G1262' => 'twi', 'TWI38G1287' => 'twi', 'TWI38G1633' => 'twi', 'TWI38G1982' => 'twi', 'TWI39G0116' => 'twi', 'TWI60G1011' => 'twi', 'TWI63G0171' => 'twi', 'TWI73G0839' => 'twi', 'TWI79G1511' => 'twi', 'unitig_0.g915' => 'ugi', 'unitig_0.g916' => 'ugi', 'unitig_21.g20219' => 'ugi', 'unitig_21.g20416' => 'ugi', 'unitig_578.g16132' => 'ugi', 'unitig_578.g16718' => 'ugi', 'unitig_62.g23481' => 'ugi', 'unitig_744.g24535' => 'ugi', 'unitig_749.g13525' => 'ugi', 'vmacro01248' => 'vma', 'vmacro02290' => 'vma', 'vmacro10946' => 'vma', 'vmacro11865' => 'vma', 'vmacro12493' => 'vma', 'vmacro17322' => 'vma', 'vmacro21599' => 'vma', 'vmacro23041' => 'vma', 'VMungo0251G0004' => 'vmu', 'VMungo0251G2639' => 'vmu', 'VMungo0251G2967' => 'vmu', 'VMungo0540G0864' => 'vmu', 'VMungo0540G1569' => 'vmu', 'VMungo0647G0317' => 'vmu', 'VMungo0720G1373' => 'vmu', 'VMungo0720G1508' => 'vmu', 'VMungo1080G0485' => 'vmu', 'VMungo1215G3177' => 'vmu', 'Zm00001eb112600' => 'zma', 'Zm00001eb120220' => 'zma', 'Zm00001eb153240' => 'zma', 'Zm00001eb168880' => 'zma', 'Zm00001eb213920' => 'zma', 'Zm00001eb228280' => 'zma', 'Zm00001eb254580' => 'zma', 'Zm00001eb272180' => 'zma', 'Zm00001eb293190' => 'zma', 'Zm00001eb322930' => 'zma', 'Zm00001eb353360' => 'zma', 'Zm00001eb353390' => 'zma', 'Zm00001eb353430' => 'zma', 'Zm00001eb353440' => 'zma', 'Zm00001eb353780' => 'zma' ) $gf_id = 'HOM05D000499' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000499' ) $data_identifier = 'HOM05D000499' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 29, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 12, 'amhyb' => (int) 8, 'aly' => (int) 12, 'aox' => (int) 9, 'arhy' => (int) 26, 'ath' => (int) 8, 'atr' => (int) 7, 'acertr' => (int) 10, 'cqu' => (int) 15, 'bca' => (int) 29, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 11, 'cansat' => (int) 8, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 9, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 8, 'cpa' => (int) 10, 'csa' => (int) 7, 'camsi' => (int) 20, 'dca' => (int) 8, 'din' => (int) 12, 'dzi' => (int) 14, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 6, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 38, 'gra' => (int) 16, 'vvi' => (int) 8, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 5, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 11, 'lja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 11, 'mpo' => (int) 3, 'mbi' => (int) 14, 'mdo' => (int) 14, 'mtr' => (int) 8, 'cme' => (int) 9, 'egut' => (int) 9, 'ama' => (int) 11, 'nta' => (int) 17, 'nnu' => (int) 11, 'oeu' => (int) 18, 'osa' => (int) 8, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 6, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 9, 'rsi' => (int) 9, 'sbr' => (int) 10, 'sbo' => (int) 8, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 10, 'sas' => (int) 10, 'shi' => (int) 6, 'smo' => (int) 7, 'sly' => (int) 14, 'spe' => (int) 10, 'spa' => (int) 8, 'tar' => (int) 19, 'tha' => (int) 10, 'tca' => (int) 8, 'esa' => (int) 8, 'tpr' => (int) 11, 'twi' => (int) 13, 'ugi' => (int) 9, 'vma' => (int) 8, 'vmu' => (int) 10, 'zma' => (int) 15 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb353780' $species_info = array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ) $local_species = 'ugi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000499', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1066', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p29780' => 'bna', 'A02p33180' => 'bna', 'A03p16470' => 'bna', 'A03p66010' => 'bna', 'A04p25970' => 'bna', 'A06p01270' => 'bna', 'A06p46080' => 'bna', 'A07p11400' => 'bna', 'A08p01840' => 'bna', 'A08p08230' => 'bna', 'A08p25740' => 'bna', 'A09p32070' => 'bna', 'A09p37830' => 'bna', 'A09p42840' => 'bna', 'A09p42850' => 'bna', 'Aa31LG10G2060' => 'aar', 'Aa31LG2G7410' => 'aar', 'Aa31LG6G10200' => 'aar', 'Aa31LG6G16680' => 'aar', 'Aa31LG6G8470' => 'aar', 'Aa31LG9G12730' => 'aar', 'Aa31LG9G13680' => 'aar', 'Aa31LG9G14920' => 'aar', 'Aa31LG9G6650' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4977' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5467' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3254' => 'aag', 'Actinidia02578' => 'ach', 'Actinidia07693' => 'ach', 'Actinidia08413' => 'ach', 'Actinidia08414' => 'ach', 'Actinidia15289' => 'ach', 'Actinidia19871' => 'ach', 'Actinidia21475' => 'ach', 'Actinidia22576' => 'ach', 'Actinidia28327' => 'ach', 'Actinidia32491' => 'ach', 'Actinidia39463' => 'ach', 'Actinidia39571' => 'ach', 'Ah.01g013750' => 'amhyb', 'Ah.01g023210' => 'amhyb', 'Ah.04g164850' => 'amhyb', 'Ah.05g178060' => 'amhyb', 'Ah.07g204270' => 'amhyb', 'Ah.07g208480' => 'amhyb', 'Ah.09g237410' => 'amhyb', 'Ah.14g089460' => 'amhyb', 'AL1G41790' => 'aly', 'AL1G49050' => 'aly', 'AL1G53810' => 'aly', 'AL1G61400' => 'aly', 'AL4G18580' => 'aly', 'AL5G12510' => 'aly', 'AL5G12540' => 'aly', 'AL6G43230' => 'aly', 'AL7G10370' => 'aly', 'AL7G19250' => 'aly', 'AL8G12240' => 'aly', 'AL8G18540' => 'aly', 'Aqoxy1G02409' => 'aox', 'Aqoxy2G03993' => 'aox', 'Aqoxy3G03357' => 'aox', 'Aqoxy4G00785' => 'aox', 'Aqoxy5G02598' => 'aox', 'Aqoxy6G00132' => 'aox', 'Aqoxy7G01776' => 'aox', 'Aqoxy7G02316' => 'aox', 'Aqoxy7G03973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.12AFKW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B8730' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27IQR1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3F75VG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3RE0GA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41TCQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.527VTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FIR39' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5W8UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DA38EV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ63HS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H1I32C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HC27T5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4M8AP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7N3CZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9UVDZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LS1NQA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT1D4B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SKC4TM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCFV76' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF9Q1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQWD9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1ZM88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WE07RT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YCK7VH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJE6Q6' => 'arhy', 'AT1G28240' => 'ath', 'AT1G34550' => 'ath', 'AT1G53040' => 'ath', 'AT2G02910' => 'ath', 'AT4G09630' => 'ath', 'AT4G38500' => 'ath', 'AT5G42660' => 'ath', 'AT5G46220' => 'ath', 'ATR0152G026' => 'atr', 'ATR0564G343' => 'atr', 'ATR0706G151' => 'atr', 'ATR0733G207' => 'atr', 'ATR0751G234' => 'atr', 'ATR0807G048' => 'atr', 'ATR1091G084' => 'atr', 'Atru.chr10.1229' => 'acertr', 'Atru.chr10.1230' => 'acertr', 'Atru.chr10.1874' => 'acertr', 'Atru.chr11.1808' => 'acertr', 'Atru.chr13.1795' => 'acertr', 'Atru.chr13.570' => 'acertr', 'Atru.chr2.2608' => 'acertr', 'Atru.chr2.2609' => 'acertr', 'Atru.chr5.3428' => 'acertr', 'Atru.chr8.1171' => 'acertr', 'AUR62004651' => 'cqu', 'AUR62008675' => 'cqu', 'AUR62010014' => 'cqu', 'AUR62013004' => 'cqu', 'AUR62014825' => 'cqu', 'AUR62015015' => 'cqu', 'AUR62015151' => 'cqu', 'AUR62017020' => 'cqu', 'AUR62019422' => 'cqu', 'AUR62023570' => 'cqu', 'AUR62025571' => 'cqu', 'AUR62029098' => 'cqu', 'AUR62033863' => 'cqu', 'AUR62034296' => 'cqu', 'AUR62040075' => 'cqu', 'BcaB02g07334' => 'bca', 'BcaB02g10575' => 'bca', 'BcaB03g12119' => 'bca', 'BcaB03g12120' => 'bca', 'BcaB03g13945' => 'bca', 'BcaB04g17123' => 'bca', 'BcaB04g17867' => 'bca', 'BcaB04g19839' => 'bca', 'BcaB07g30317' => 'bca', 'BcaB07g32432' => 'bca', 'BcaB07g33362' => 'bca', 'BcaB08g36611' => 'bca', 'BcaC01g00028' => 'bca', 'BcaC01g01356' => 'bca', 'BcaC01g02034' => 'bca', 'BcaC01g06051' => 'bca', 'BcaC03g16839' => 'bca', 'BcaC03g17176' => 'bca', 'BcaC05g26829' => 'bca', 'BcaC06g31490' => 'bca', 'BcaC06g35344' => 'bca', 'BcaC06g36570' => 'bca', 'BcaC07g37537' => 'bca', 'BcaC08g43491' => 'bca', 'BcaC08g43773' => 'bca', 'BcaNung00234' => 'bca', 'BcaNung01982' => 'bca', 'BcaNung03707' => 'bca', 'BcaNung06454' => 'bca', 'BolC2t10762H' => 'bol', 'BolC2t11191H' => 'bol', 'BolC3t14322H' => 'bol', 'BolC3t19747H' => 'bol', 'BolC3t21425H' => 'bol', 'BolC4t27800H' => 'bol', 'BolC5t31423H' => 'bol', 'BolC6t35951H' => 'bol', 'BolC6t36282H' => 'bol', 'BolC7t40678H' => 'bol', 'BolC7t40679H' => 'bol', 'BolC7t42222H' => 'bol', 'BolC7t43492H' => 'bol', 'BolC7t46785H' => 'bol', 'BolC8t47853H' => 'bol', 'BolC9t56805H' => 'bol', 'BraA02t08000Z' => 'bra', 'BraA02t08341Z' => 'bra', 'BraA03t10936Z' => 'bra', 'BraA03t15657Z' => 'bra', 'BraA04t18100Z' => 'bra', 'BraA05t20523Z' => 'bra', 'BraA06t23353Z' => 'bra', 'BraA06t27473Z' => 'bra', 'BraA06t27769Z' => 'bra', 'BraA07t28928Z' => 'bra', 'BraA08t32236Z' => 'bra', 'BraA08t32841Z' => 'bra', 'BraA08t34524Z' => 'bra', 'BraA09t38742Z' => 'bra', 'BraA09t39295Z' => 'bra', 'C02p47180' => 'bna', 'C02p50990' => 'bna', 'C03p19360' => 'bna', 'C03p74950' => 'bna', 'C03p91000' => 'bna', 'C04p63260' => 'bna', 'C05p27050' => 'bna', 'C06p08750' => 'bna', 'C06p11490' => 'bna', 'C07p02820' => 'bna', 'C07p17180' => 'bna', 'C07p29440' => 'bna', 'C07p63730' => 'bna', 'C09p39260' => 'bna', 'CAN.G1164.34' => 'can', 'CAN.G1164.39' => 'can', 'CAN.G1530.3' => 'can', 'CAN.G162.61' => 'can', 'CAN.G176.6' => 'can', 'CAN.G289.49' => 'can', 'CAN.G370.21' => 'can', 'CAN.G370.22' => 'can', 'CAN.G371.117' => 'can', 'CAN.G58.37' => 'can', 'CAN.G588.98' => 'can', 'CANSAT21G2266' => 'cansat', 'CANSAT25G2799' => 'cansat', 'CANSAT35G0862' => 'cansat', 'CANSAT35G1704' => 'cansat', 'CANSAT35G1760' => 'cansat', 'CANSAT56G3971' => 'cansat', 'CANSAT56G4116' => 'cansat', 'CANSAT80G1259' => 'cansat', 'CARHR027730' => 'chi', 'CARHR033880' => 'chi', 'CARHR043270' => 'chi', 'CARHR145330' => 'chi', 'CARHR145340' => 'chi', 'CARHR175570' => 'chi', 'CARHR181570' => 'chi', 'CARHR258470' => 'chi', 'CARHR260490' => 'chi', 'CARHR294220' => 'chi', 'Carub.0001s2668' => 'cru', 'Carub.0001s3257' => 'cru', 'Carub.0001s4220' => 'cru', 'Carub.0005s0179' => 'cru', 'Carub.0006s2807' => 'cru', 'Carub.0007s0039' => 'cru', 'Carub.0008s0169' => 'cru', 'Carub.0008s0636' => 'cru', 'Ca_00338_v3' => 'car', 'Ca_00542_v3' => 'car', 'Ca_01844_v3' => 'car', 'Ca_10611_v3' => 'car', 'Ca_13326_v3' => 'car', 'Ca_17944_v3' => 'car', 'Ca_18546_v3' => 'car', 'Ca_24219_v3' => 'car', 'Ca_29972_v3' => 'car', 'CBR_g3681' => 'cbr', 'CBR_g40021' => 'cbr', 'Cc01_g08140' => 'ccan', 'Cc02_g13410' => 'ccan', 'Cc02_g37480' => 'ccan', 'Cc05_g12030' => 'ccan', 'Cc09_g03370' => 'ccan', 'Cc09_g10300' => 'ccan', 'Cc10_g03530' => 'ccan', 'Cc10_g11380' => 'ccan', 'CDE01G0176' => 'cde', 'CDE02G0675' => 'cde', 'CDE02G0942' => 'cde', 'CDE02G1153' => 'cde', 'CDE02G4177' => 'cde', 'CDE04G2117' => 'cde', 'CDE04G2736' => 'cde', 'CDE08G1161' => 'cde', 'CDE09G1238' => 'cde', 'Cfa000467' => 'cfa', 'Cfa000947' => 'cfa', 'Cfa004969' => 'cfa', 'Cfa005284' => 'cfa', 'Cfa008993' => 'cfa', 'Cfa018187' => 'cfa', 'Cfa018454' => 'cfa', 'Cfa020585' => 'cfa', 'Ciclev10000424m.g' => 'ccl', 'Ciclev10003605m.g' => 'ccl', 'Ciclev10007828m.g' => 'ccl', 'Ciclev10014620m.g' => 'ccl', 'Ciclev10015169m.g' => 'ccl', 'Ciclev10018291m.g' => 'ccl', 'Ciclev10028256m.g' => 'ccl', 'Ciclev10033822m.g' => 'ccl', 'CiPaw.05G060300' => 'cil', 'CiPaw.05G085000' => 'cil', 'CiPaw.06G083700' => 'cil', 'CiPaw.06G120300' => 'cil', 'CiPaw.09G060500' => 'cil', 'CiPaw.09G123800' => 'cil', 'CiPaw.11G169700' => 'cil', 'CiPaw.12G118300' => 'cil', 'CiPaw.15G071000' => 'cil', 'CiPaw.15G081900' => 'cil', 'ClCG01G024610' => 'cla', 'ClCG03G006070' => 'cla', 'ClCG05G019250' => 'cla', 'ClCG09G009500' => 'cla', 'ClCG11G008200' => 'cla', 'ClCG11G018080' => 'cla', 'COL.COLO4_17373' => 'col', 'COL.COLO4_22994' => 'col', 'COL.COLO4_26389' => 'col', 'COL.COLO4_27170' => 'col', 'COL.COLO4_31074' => 'col', 'COL.COLO4_31465' => 'col', 'COL.COLO4_36438' => 'col', 'COL.COLO4_36439' => 'col', 'Cpa.g.c38781' => 'cpa', 'Cpa.g.sc128.12' => 'cpa', 'Cpa.g.sc166.7' => 'cpa', 'Cpa.g.sc166.8' => 'cpa', 'Cpa.g.sc20.111' => 'cpa', 'Cpa.g.sc27.31' => 'cpa', 'Cpa.g.sc64.36' => 'cpa', 'Cpa.g.sc64.37' => 'cpa', 'Cpa.g.sc66.49' => 'cpa', 'Cpa.g.sc80.64' => 'cpa', 'CsaV3_1G012320' => 'csa', 'CsaV3_2G008480' => 'csa', 'CsaV3_2G033450' => 'csa', 'CsaV3_3G044830' => 'csa', 'CsaV3_4G033710' => 'csa', 'CsaV3_6G051730' => 'csa', 'CsaV3_7G025350' => 'csa', 'CSS0001067' => 'camsi', 'CSS0005996' => 'camsi', 'CSS0006590' => 'camsi', 'CSS0009673' => 'camsi', 'CSS0010201' => 'camsi', 'CSS0010549' => 'camsi', 'CSS0011364' => 'camsi', 'CSS0014473' => 'camsi', 'CSS0014961' => 'camsi', 'CSS0020191' => 'camsi', 'CSS0021165' => 'camsi', 'CSS0022306' => 'camsi', 'CSS0030591' => 'camsi', 'CSS0030696' => 'camsi', 'CSS0032653' => 'camsi', 'CSS0037487' => 'camsi', 'CSS0041102' => 'camsi', 'CSS0041261' => 'camsi', 'CSS0046246' => 'camsi', 'CSS0049256' => 'camsi', 'DCAR_004075' => 'dca', 'DCAR_011538' => 'dca', 'DCAR_019553' => 'dca', 'DCAR_020952' => 'dca', 'DCAR_021739' => 'dca', 'DCAR_027407' => 'dca', 'DCAR_027913' => 'dca', 'DCAR_028066' => 'dca', 'Dinv05899' => 'din', 'Dinv07563' => 'din', 'Dinv08010' => 'din', 'Dinv14125' => 'din', 'Dinv20172' => 'din', 'Dinv30743' => 'din', 'Dinv31229' => 'din', 'Dinv34162' => 'din', 'Dinv36028' => 'din', 'Dinv39368' => 'din', 'Dinv40565' => 'din', 'Dinv41706' => 'din', 'Duzib052G0089' => 'dzi', 'Duzib116G0641' => 'dzi', 'Duzib132G0069' => 'dzi', 'Duzib132G1219' => 'dzi', 'Duzib147G0278' => 'dzi', 'Duzib160G0480' => 'dzi', 'Duzib170G0661' => 'dzi', 'Duzib177G0591' => 'dzi', 'Duzib187G1353' => 'dzi', 'Duzib192G0858' => 'dzi', 'Duzib192G0883' => 'dzi', 'Duzib213G0506' => 'dzi', 'Duzib235G0289' => 'dzi', 'Duzib251G0422' => 'dzi', 'ECA232G3898' => 'eca', 'ECA233G5950' => 'eca', 'ECA234G1699' => 'eca', 'ECA234G2421' => 'eca', 'ECA236G0426' => 'eca', 'ECA236G4331' => 'eca', 'ECA248G2573' => 'eca', 'EL10Ac1g00077' => 'bvu', 'EL10Ac1g01746' => 'bvu', 'EL10Ac2g03464' => 'bvu', 'EL10Ac4g08176' => 'bvu', 'EL10Ac7g17521' => 'bvu', 'EL10Ac8g20386' => 'bvu', 'EL10Ac9g21343' => 'bvu', 'EL10Ac9g22688' => 'bvu', 'Eucgr.B03434' => 'egr', 'Eucgr.D00618' => 'egr', 'Eucgr.E02395' => 'egr', 'Eucgr.F01129' => 'egr', 'Eucgr.F02622' => 'egr', 'Eucgr.F04207' => 'egr', 'FAN01G0570' => 'fan', 'FAN03G3351' => 'fan', 'FAN06G3702' => 'fan', 'FAN07G2149' => 'fan', 'FAN10G3758' => 'fan', 'FAN11G1170' => 'fan', 'FAN11G2050' => 'fan', 'FAN11G2724' => 'fan', 'FAN12G1700' => 'fan', 'FAN12G2028' => 'fan', 'FAN15G1160' => 'fan', 'FAN15G3063' => 'fan', 'FAN16G2540' => 'fan', 'FAN16G3077' => 'fan', 'FAN16G3624' => 'fan', 'FAN17G0221' => 'fan', 'FAN20G2492' => 'fan', 'FAN20G2905' => 'fan', 'FAN21G0548' => 'fan', 'FAN21G1300' => 'fan', 'FAN22G0077' => 'fan', 'FAN22G1315' => 'fan', 'FAN24G1280' => 'fan', 'FAN24G1445' => 'fan', 'FAN24G3527' => 'fan', 'FAN25G0464' => 'fan', 'FAN25G2885' => 'fan', 'FAN25G3270' => 'fan', 'FAN27G1101' => 'fan', 'FAN27G2846' => 'fan', 'FAN27G3524' => 'fan', 'FvH4_2g11770' => 'fve', 'FvH4_2g15630' => 'fve', 'FvH4_3g05570' => 'fve', 'FvH4_3g09110' => 'fve', 'FvH4_3g19940' => 'fve', 'FvH4_4g04821' => 'fve', 'FvH4_4g31480' => 'fve', 'FvH4_7g01740' => 'fve', 'Glyma.05G130400' => 'gma', 'Glyma.05G156400' => 'gma', 'Glyma.07G197000' => 'gma', 'Glyma.08G085151' => 'gma', 'Glyma.08G114500' => 'gma', 'Glyma.08G300400' => 'gma', 'Glyma.10G215800' => 'gma', 'Glyma.12G224400' => 'gma', 'Glyma.13G179300' => 'gma', 'Glyma.13G218151' => 'gma', 'Glyma.13G238800' => 'gma', 'Glyma.13G276900' => 'gma', 'Glyma.14G078200' => 'gma', 'Glyma.15G074500' => 'gma', 'Glyma.15G094100' => 'gma', 'Glyma.17G247200' => 'gma', 'Glyma.18G120100' => 'gma', 'Glyma.20G176000' => 'gma', 'Gohir.A01G063600' => 'ghi', 'Gohir.A01G170301' => 'ghi', 'Gohir.A02G060500' => 'ghi', 'Gohir.A05G133850' => 'ghi', 'Gohir.A05G161400' => 'ghi', 'Gohir.A06G012900' => 'ghi', 'Gohir.A06G035901' => 'ghi', 'Gohir.A06G127100' => 'ghi', 'Gohir.A06G210500' => 'ghi', 'Gohir.A08G008650' => 'ghi', 'Gohir.A09G072700' => 'ghi', 'Gohir.A09G088301' => 'ghi', 'Gohir.A10G040600' => 'ghi', 'Gohir.A12G036300' => 'ghi', 'Gohir.A12G143350' => 'ghi', 'Gohir.A12G165500' => 'ghi', 'Gohir.A13G145700' => 'ghi', 'Gohir.D01G050000' => 'ghi', 'Gohir.D01G051366' => 'ghi', 'Gohir.D01G161350' => 'ghi', 'Gohir.D02G065900' => 'ghi', 'Gohir.D05G164200' => 'ghi', 'Gohir.D05G355500' => 'ghi', 'Gohir.D06G010400' => 'ghi', 'Gohir.D06G111250' => 'ghi', 'Gohir.D06G132000' => 'ghi', 'Gohir.D06G210500' => 'ghi', 'Gohir.D07G165675' => 'ghi', 'Gohir.D08G062240' => 'ghi', 'Gohir.D08G086101' => 'ghi', 'Gohir.D08G138060' => 'ghi', 'Gohir.D09G072300' => 'ghi', 'Gohir.D10G041400' => 'ghi', 'Gohir.D11G191020' => 'ghi', 'Gohir.D11G212066' => 'ghi', 'Gohir.D12G036300' => 'ghi', 'Gohir.D12G168600' => 'ghi', 'Gohir.D13G150600' => 'ghi', 'Gorai.001G057300' => 'gra', 'Gorai.002G069900' => 'gra', 'Gorai.002G200000' => 'gra', 'Gorai.003G067600' => 'gra', 'Gorai.005G074800' => 'gra', 'Gorai.006G087300' => 'gra', 'Gorai.008G037500' => 'gra', 'Gorai.008G181400' => 'gra', 'Gorai.009G169400' => 'gra', 'Gorai.009G387900' => 'gra', 'Gorai.010G013300' => 'gra', 'Gorai.010G153800' => 'gra', 'Gorai.010G255800' => 'gra', 'Gorai.011G043700' => 'gra', 'Gorai.011G198900' => 'gra', 'Gorai.013G168400' => 'gra', 'GSVIVG01005212001' => 'vvi', 'GSVIVG01006163001' => 'vvi', 'GSVIVG01009625001' => 'vvi', 'GSVIVG01014338001' => 'vvi', 'GSVIVG01020005001' => 'vvi', 'GSVIVG01021450001' => 'vvi', 'GSVIVG01023975001' => 'vvi', 'GSVIVG01034490001' => 'vvi', 'HanXRQChr04g0112071' => 'han', 'HanXRQChr05g0131151' => 'han', 'HanXRQChr09g0262371' => 'han', 'HanXRQChr09g0268401' => 'han', 'HanXRQChr10g0279241' => 'han', 'HanXRQChr10g0297961' => 'han', 'HanXRQChr11g0326231' => 'han', 'HanXRQChr11g0328471' => 'han', 'HanXRQChr16g0507941' => 'han', 'HanXRQChr17g0560211' => 'han', 'Haze_02108' => 'cav', 'Haze_02428' => 'cav', 'Haze_05593' => 'cav', 'Haze_06448' => 'cav', 'Haze_09427' => 'cav', 'Haze_12022' => 'cav', 'Haze_17612' => 'cav', 'Haze_17928' => 'cav', 'Hma1.2p1_0032F.1_g019250' => 'hma', 'Hma1.2p1_0163F.1_g072690' => 'hma', 'Hma1.2p1_0265F.1_g106710' => 'hma', 'Hma1.2p1_0286F.1_g113970' => 'hma', 'Hma1.2p1_0363F.1_g136640' => 'hma', 'Hma1.2p1_0584F.1_g183470' => 'hma', 'Hma1.2p1_0885F.1_g232570' => 'hma', 'HPP92_006022' => 'vpl', 'HPP92_007320' => 'vpl', 'HPP92_011521' => 'vpl', 'HPP92_019387' => 'vpl', 'HPP92_024038' => 'vpl', 'Hund05891' => 'sun', 'Hund06450' => 'sun', 'Hund12053' => 'sun', 'Hund16800' => 'sun', 'Hund21222' => 'sun', 'Hund22896' => 'sun', 'Hund23746' => 'sun', 'Hund27083' => 'sun', 'Lalb_Chr02g0141831' => 'lal', 'Lalb_Chr02g0141841' => 'lal', 'Lalb_Chr05g0220411' => 'lal', 'Lalb_Chr06g0162081' => 'lal', 'Lalb_Chr09g0327651' => 'lal', 'Lalb_Chr13g0295051' => 'lal', 'Lalb_Chr15g0086801' => 'lal', 'Lalb_Chr16g0383781' => 'lal', 'Lalb_Chr16g0383791' => 'lal', 'Lalb_Chr18g0055441' => 'lal', 'Lalb_Chr18g0059611' => 'lal', 'Lalb_Chr20g0109661' => 'lal', 'Lalb_Chr20g0109831' => 'lal', 'Lalb_Chr20g0121871' => 'lal', 'Lalb_Chr22g0355361' => 'lal', 'Lalb_Chr25g0286371' => 'lal', 'Lj1A1187G43' => 'lonja', 'Lj1A1205T50' => 'lonja', 'Lj1A800G33' => 'lonja', 'Lj1C1187T7' => 'lonja', 'Lj1C843T11' => 'lonja', 'Lj1g0010940' => 'lja', 'Lj2A288T69' => 'lonja', 'Lj3g0024276' => 'lja', 'Lj4A47T76' => 'lonja', 'Lj4g0005805' => 'lja', 'Lj4g0006097' => 'lja', 'Lj4g0008528' => 'lja', 'Lj4g0024907' => 'lja', 'Lj5g0012472' => 'lja', 'Lj5g0018648' => 'lja', 'Lj6C789G1' => 'lonja', 'Lj6g0004000' => 'lja', 'Lj7A292G67' => 'lonja', 'Lj7A292T64' => 'lonja', 'Lj9A400T58' => 'lonja', 'Lsat_1_v5_gn_1_126181' => 'lsa', 'Lsat_1_v5_gn_4_123041' => 'lsa', 'Lsat_1_v5_gn_4_133620' => 'lsa', 'Lsat_1_v5_gn_4_53221' => 'lsa', 'Lsat_1_v5_gn_4_71961' => 'lsa', 'Lsat_1_v5_gn_7_105241' => 'lsa', 'Lsat_1_v5_gn_7_21361' => 'lsa', 'Lsat_1_v5_gn_7_28860' => 'lsa', 'Lsat_1_v5_gn_7_31260' => 'lsa', 'Lsat_1_v5_gn_8_52801' => 'lsa', 'Manes.02G191400' => 'mes', 'Manes.03G110100' => 'mes', 'Manes.04G071100' => 'mes', 'Manes.05G100500' => 'mes', 'Manes.05G164700' => 'mes', 'Manes.15G087000' => 'mes', 'Manes.15G121500' => 'mes', 'Manes.16G028300' => 'mes', 'Manes.17G046100' => 'mes', 'Manes.17G069800' => 'mes', 'Manes.18G100500' => 'mes', 'Mapoly0002s0109' => 'mpo', 'Mapoly0024s0007' => 'mpo', 'Mapoly0089s0032' => 'mpo', 'MBI04_g42241_MAGBIO' => 'mbi', 'MBI05_g11988_MAGBIO' => 'mbi', 'MBI05_g35452_MAGBIO' => 'mbi', 'MBI07_g30179_MAGBIO' => 'mbi', 'MBI07_g35859_MAGBIO' => 'mbi', 'MBI07_g35860_MAGBIO' => 'mbi', 'MBI07_g37166_MAGBIO' => 'mbi', 'MBI08_g18172_MAGBIO' => 'mbi', 'MBI09_g08441_MAGBIO' => 'mbi', 'MBI13_g01676_MAGBIO' => 'mbi', 'MBI14_g42955_MAGBIO' => 'mbi', 'MBI16_g13161_MAGBIO' => 'mbi', 'MBI17_g27204_MAGBIO' => 'mbi', 'MBI19_g21595_MAGBIO' => 'mbi', 'MD00G1148400' => 'mdo', 'MD02G1301200' => 'mdo', 'MD03G1227800' => 'mdo', 'MD05G1041100' => 'mdo', 'MD05G1124800' => 'mdo', 'MD05G1284000' => 'mdo', 'MD05G1338800' => 'mdo', 'MD05G1338900' => 'mdo', 'MD07G1022800' => 'mdo', 'MD10G1047500' => 'mdo', 'MD10G1127500' => 'mdo', 'MD10G1262300' => 'mdo', 'MD10G1293800' => 'mdo', 'MD16G1074300' => 'mdo', 'Medtr1g021670' => 'mtr', 'Medtr1g096320' => 'mtr', 'Medtr2g013690' => 'mtr', 'Medtr2g019450' => 'mtr', 'Medtr2g085170' => 'mtr', 'Medtr4g088785' => 'mtr', 'Medtr8g055930' => 'mtr', 'Medtr8g085850' => 'mtr', 'MELO3C002605.2' => 'cme', 'MELO3C003891.2' => 'cme', 'MELO3C004012.2' => 'cme', 'MELO3C007134.2' => 'cme', 'MELO3C008118.2' => 'cme', 'MELO3C016700.2' => 'cme', 'MELO3C024127.2' => 'cme', 'MELO3C033361.2' => 'cme', 'MELO3C033362.2' => 'cme', 'Migut.C00430' => 'egut', 'Migut.C01246' => 'egut', 'Migut.E00101' => 'egut', 'Migut.H01486' => 'egut', 'Migut.H01939' => 'egut', 'Migut.K00360' => 'egut', 'Migut.M00910' => 'egut', 'Migut.M01139' => 'egut', 'Migut.N02677' => 'egut', 'MSTRG.13252' => 'ama', 'MSTRG.14701' => 'ama', 'MSTRG.1521' => 'ama', 'MSTRG.15884' => 'ama', 'MSTRG.16242' => 'ama', 'MSTRG.22285' => 'ama', 'MSTRG.22444' => 'ama', 'MSTRG.2349' => 'ama', 'MSTRG.26308' => 'ama', 'MSTRG.28296' => 'ama', 'MSTRG.9895' => 'ama', 'Nitab4.5_0000110g0060' => 'nta', 'Nitab4.5_0000420g0130' => 'nta', 'Nitab4.5_0000422g0030' => 'nta', 'Nitab4.5_0000560g0180' => 'nta', 'Nitab4.5_0000703g0100' => 'nta', 'Nitab4.5_0000786g0200' => 'nta', 'Nitab4.5_0001336g0020' => 'nta', 'Nitab4.5_0001796g0030' => 'nta', 'Nitab4.5_0003348g0060' => 'nta', 'Nitab4.5_0003698g0040' => 'nta', 'Nitab4.5_0003942g0090' => 'nta', 'Nitab4.5_0004775g0070' => 'nta', 'Nitab4.5_0004864g0030' => 'nta', 'Nitab4.5_0005615g0020' => 'nta', 'Nitab4.5_0009288g0030' => 'nta', 'Nitab4.5_0009341g0010' => 'nta', 'Nitab4.5_0009535g0010' => 'nta', 'Nn1g03995' => 'nnu', 'Nn1g04100' => 'nnu', 'Nn1g06530' => 'nnu', 'Nn3g16404' => 'nnu', 'Nn3g17212' => 'nnu', 'Nn3g20776' => 'nnu', 'Nn3g21923' => 'nnu', 'Nn5g27737' => 'nnu', 'Nn5g29461' => 'nnu', 'Nn7g38355' => 'nnu', 'Nn8g39873' => 'nnu', 'Oeu000548.2' => 'oeu', 'Oeu004672.1' => 'oeu', 'Oeu015605.2' => 'oeu', 'Oeu016092.1' => 'oeu', 'Oeu017879.3' => 'oeu', 'Oeu024910.1' => 'oeu', 'Oeu028965.1' => 'oeu', 'Oeu031269.1' => 'oeu', 'Oeu031270.1' => 'oeu', 'Oeu032535.1' => 'oeu', 'Oeu034151.1' => 'oeu', 'Oeu034152.1' => 'oeu', 'Oeu034588.2' => 'oeu', 'Oeu050846.1' => 'oeu', 'Oeu050849.2' => 'oeu', 'Oeu051063.2' => 'oeu', 'Oeu052368.1' => 'oeu', 'Oeu052370.1' => 'oeu', 'Os01g0210400' => 'osa', 'Os01g0304300' => 'osa', 'Os01g0749100' => 'osa', 'Os02g0745800' => 'osa', 'Os03g0769050' => 'osa', 'Os05g0531500' => 'osa', 'Os06g0724300' => 'osa', 'Os11g0198100' => 'osa', 'Peaxi162Scf00069g01425' => 'pax', 'Peaxi162Scf00280g00811' => 'pax', 'Peaxi162Scf00310g00615' => 'pax', 'Peaxi162Scf00362g00542' => 'pax', 'Peaxi162Scf00461g00310' => 'pax', 'Peaxi162Scf00530g00118' => 'pax', 'Peaxi162Scf00541g00057' => 'pax', 'Peaxi162Scf00661g00017' => 'pax', 'Peaxi162Scf00926g00027' => 'pax', 'Peaxi162Scf01064g00263' => 'pax', 'Peaxi162Scf01211g00135' => 'pax', 'PGR004G2336' => 'pgr', 'PGR042G0327' => 'pgr', 'PGR042G1957' => 'pgr', 'PGR042G2003' => 'pgr', 'PGR042G3929' => 'pgr', 'PGR083G1137' => 'pgr', 'PGR083G1364' => 'pgr', 'PGSC0003DMG400003381' => 'stu', 'PGSC0003DMG400003417' => 'stu', 'PGSC0003DMG400008981' => 'stu', 'PGSC0003DMG400012417' => 'stu', 'PGSC0003DMG400012823' => 'stu', 'PGSC0003DMG400016885' => 'stu', 'PGSC0003DMG400022812' => 'stu', 'PGSC0003DMG400029726' => 'stu', 'PGSC0003DMG401009243' => 'stu', 'PGSC0003DMG401031505' => 'stu', 'PGSC0003DMG402031505' => 'stu', 'Phvul.001G017600' => 'pvu', 'Phvul.002G193500' => 'pvu', 'Phvul.002G228900' => 'pvu', 'Phvul.002G236800' => 'pvu', 'Phvul.003G049500' => 'pvu', 'Phvul.005G072000' => 'pvu', 'Phvul.006G164800' => 'pvu', 'Phvul.006G185100' => 'pvu', 'Phvul.007G090000' => 'pvu', 'Potri.001G399800' => 'ptr', 'Potri.002G149900' => 'ptr', 'Potri.004G044100' => 'ptr', 'Potri.004G177600' => 'ptr', 'Potri.009G138000' => 'ptr', 'Potri.010G094000' => 'ptr', 'Potri.011G053000' => 'ptr', 'Potri.011G119300' => 'ptr', 'Potri.013G113700' => 'ptr', 'Potri.018G107800' => 'ptr', 'Potri.019G084100' => 'ptr', 'Pp3c14_23720' => 'ppa', 'Pp3c16_6340' => 'ppa', 'Pp3c23_13420' => 'ppa', 'Pp3c24_2740' => 'ppa', 'Pp3c25_860' => 'ppa', 'Pp3c8_21750' => 'ppa', 'Prupe.1G273000' => 'ppe', 'Prupe.1G273700' => 'ppe', 'Prupe.1G274100' => 'ppe', 'Prupe.2G023300' => 'ppe', 'Prupe.4G048000' => 'ppe', 'Prupe.4G080400' => 'ppe', 'Prupe.4G181200' => 'ppe', 'Prupe.8G056900' => 'ppe', 'Prupe.8G168700' => 'ppe', 'Psat1g189080' => 'psa', 'Psat1g204760' => 'psa', 'Psat4g175560' => 'psa', 'Psat4g177720' => 'psa', 'Psat5g244240' => 'psa', 'Psat6g010720' => 'psa', 'Psat6g187200' => 'psa', 'Psat7g072040' => 'psa', 'PSO017G3501' => 'pso', 'PSO063G2148' => 'pso', 'PSO063G5608' => 'pso', 'PSO210G6392' => 'pso', 'PSO541G2319' => 'pso', 'PSO541G2836' => 'pso', 'PSO541G4012' => 'pso', 'PSO541G6253' => 'pso', 'PSO675G0580' => 'pso', 'PSO675G0856' => 'pso', 'PSO675G5635' => 'pso', 'PSO675G9157' => 'pso', 'PSO832G1660' => 'pso', 'PSO832G1969' => 'pso', 'QL02p007186' => 'qlo', 'QL02p033904' => 'qlo', 'QL03p064391' => 'qlo', 'QL05p040593' => 'qlo', 'QL05p058242' => 'qlo', 'QL08p021825' => 'qlo', 'QL11p004981' => 'qlo', 'RcHm_v2.0_Chr1g0318301' => 'rch', 'RcHm_v2.0_Chr4g0418501' => 'rch', 'RcHm_v2.0_Chr4g0439971' => 'rch', 'RcHm_v2.0_Chr5g0008541' => 'rch', 'RcHm_v2.0_Chr5g0014101' => 'rch', 'RcHm_v2.0_Chr5g0014131' => 'rch', 'RcHm_v2.0_Chr5g0033621' => 'rch', 'RcHm_v2.0_Chr6g0272041' => 'rch', 'RcHm_v2.0_Chr6g0278831' => 'rch', 'Rhsim02G0130400' => 'rsi', 'Rhsim02G0171100' => 'rsi', 'Rhsim05G0053000' => 'rsi', 'Rhsim05G0053100' => 'rsi', 'Rhsim06G0096500' => 'rsi', 'Rhsim06G0096600' => 'rsi', 'Rhsim06G0199100' => 'rsi', 'Rhsim12G0062300' => 'rsi', 'Rhsim12G0062800' => 'rsi', 'Sabra02G0118600' => 'sbr', 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'Solyc03g079860.2' => 'sly', 'Solyc04g079770.3' => 'sly', 'Solyc05g007430.4' => 'sly', 'Solyc07g063150.3' => 'sly', 'Solyc08g016620.3' => 'sly', 'Solyc09g057590.3' => 'sly', 'Solyc09g057600.1' => 'sly', 'Solyc10g009050.3' => 'sly', 'Solyc11g017420.2' => 'sly', 'Sopen01g053810' => 'spe', 'Sopen02g023040' => 'spe', 'Sopen03g002440' => 'spe', 'Sopen04g033350' => 'spe', 'Sopen05g003310' => 'spe', 'Sopen07g004050' => 'spe', 'Sopen07g031340' => 'spe', 'Sopen08g006990' => 'spe', 'Sopen10g004830' => 'spe', 'Sopen11g009370' => 'spe', 'Sp1g24450' => 'spa', 'Sp1g29670' => 'spa', 'Sp1g39600' => 'spa', 'Sp2g11080' => 'spa', 'Sp2g13970' => 'spa', 'Sp4g16130' => 'spa', 'Sp6g13080' => 'spa', 'Sp7g37270' => 'spa', 'TAR371G0065' => 'tar', 'TAR376G0340' => 'tar', 'TAR376G0435' => 'tar', 'TAR381G0002' => 'tar', 'TAR381G1236' => 'tar', 'TAR624G0055' => 'tar', 'TAR624G0324' => 'tar', 'TAR624G0696' => 'tar', 'TAR624G0906' => 'tar', 'TAR625G0107' => 'tar', 'TAR626G0015' => 'tar', 'TAR626G1356' => 'tar', 'TAR627G0888' => 'tar', 'TAR628G0399' => 'tar', 'TAR628G1327' => 'tar', 'TAR629G2831' => 'tar', 'TAR629G2874' => 'tar', 'TAR633G1432' => 'tar', 'TAR633G2771' => 'tar', 'THA.LOC104803394' => 'tha', 'THA.LOC104805153' => 'tha', 'THA.LOC104806784' => 'tha', 'THA.LOC104810473' => 'tha', 'THA.LOC104813100' => 'tha', 'THA.LOC104814215' => 'tha', 'THA.LOC104815554' => 'tha', 'THA.LOC104820544' => 'tha', 'THA.LOC104824754' => 'tha', 'THA.LOC104827717' => 'tha', 'Thecc.02G031400' => 'tca', 'Thecc.02G055900' => 'tca', 'Thecc.02G350800' => 'tca', 'Thecc.06G150900' => 'tca', 'Thecc.06G186600' => 'tca', 'Thecc.07G089600' => 'tca', 'Thecc.08G020400' => 'tca', 'Thecc.08G182100' => 'tca', 'Thhalv10000873m.g' => 'esa', 'Thhalv10004185m.g' => 'esa', 'Thhalv10006981m.g' => 'esa', 'Thhalv10007204m.g' => 'esa', 'Thhalv10011374m.g' => 'esa', 'Thhalv10013482m.g' => 'esa', 'Thhalv10017801m.g' => 'esa', 'Thhalv10024983m.g' => 'esa', 'TPR.G12072' => 'tpr', 'TPR.G15769' => 'tpr', 'TPR.G16504' => 'tpr', 'TPR.G16506' => 'tpr', 'TPR.G24345' => 'tpr', 'TPR.G26666' => 'tpr', 'TPR.G27320' => 'tpr', 'TPR.G31819' => 'tpr', 'TPR.G38879' => 'tpr', 'TPR.G39015' => 'tpr', 'TPR.G8819' => 'tpr', 'TWI09G0924' => 'twi', 'TWI12G0811' => 'twi', 'TWI12G1294' => 'twi', 'TWI31G0150' => 'twi', 'TWI36G1262' => 'twi', 'TWI38G1287' => 'twi', 'TWI38G1633' => 'twi', 'TWI38G1982' => 'twi', 'TWI39G0116' => 'twi', 'TWI60G1011' => 'twi', 'TWI63G0171' => 'twi', 'TWI73G0839' => 'twi', 'TWI79G1511' => 'twi', 'unitig_0.g915' => 'ugi', 'unitig_0.g916' => 'ugi', 'unitig_21.g20219' => 'ugi', 'unitig_21.g20416' => 'ugi', 'unitig_578.g16132' => 'ugi', 'unitig_578.g16718' => 'ugi', 'unitig_62.g23481' => 'ugi', 'unitig_744.g24535' => 'ugi', 'unitig_749.g13525' => 'ugi', 'vmacro01248' => 'vma', 'vmacro02290' => 'vma', 'vmacro10946' => 'vma', 'vmacro11865' => 'vma', 'vmacro12493' => 'vma', 'vmacro17322' => 'vma', 'vmacro21599' => 'vma', 'vmacro23041' => 'vma', 'VMungo0251G0004' => 'vmu', 'VMungo0251G2639' => 'vmu', 'VMungo0251G2967' => 'vmu', 'VMungo0540G0864' => 'vmu', 'VMungo0540G1569' => 'vmu', 'VMungo0647G0317' => 'vmu', 'VMungo0720G1373' => 'vmu', 'VMungo0720G1508' => 'vmu', 'VMungo1080G0485' => 'vmu', 'VMungo1215G3177' => 'vmu', 'Zm00001eb112600' => 'zma', 'Zm00001eb120220' => 'zma', 'Zm00001eb153240' => 'zma', 'Zm00001eb168880' => 'zma', 'Zm00001eb213920' => 'zma', 'Zm00001eb228280' => 'zma', 'Zm00001eb254580' => 'zma', 'Zm00001eb272180' => 'zma', 'Zm00001eb293190' => 'zma', 'Zm00001eb322930' => 'zma', 'Zm00001eb353360' => 'zma', 'Zm00001eb353390' => 'zma', 'Zm00001eb353430' => 'zma', 'Zm00001eb353440' => 'zma', 'Zm00001eb353780' => 'zma' ), 'gf_id' => 'HOM05D000499', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000499' ), 'data_identifier' => 'HOM05D000499', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000499', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1066', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p29780' => 'bna', 'A02p33180' => 'bna', 'A03p16470' => 'bna', 'A03p66010' => 'bna', 'A04p25970' => 'bna', 'A06p01270' => 'bna', 'A06p46080' => 'bna', 'A07p11400' => 'bna', 'A08p01840' => 'bna', 'A08p08230' => 'bna', 'A08p25740' => 'bna', 'A09p32070' => 'bna', 'A09p37830' => 'bna', 'A09p42840' => 'bna', 'A09p42850' => 'bna', 'Aa31LG10G2060' => 'aar', 'Aa31LG2G7410' => 'aar', 'Aa31LG6G10200' => 'aar', 'Aa31LG6G16680' => 'aar', 'Aa31LG6G8470' => 'aar', 'Aa31LG9G12730' => 'aar', 'Aa31LG9G13680' => 'aar', 'Aa31LG9G14920' => 'aar', 'Aa31LG9G6650' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4977' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5467' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3254' => 'aag', 'Actinidia02578' => 'ach', 'Actinidia07693' => 'ach', 'Actinidia08413' => 'ach', 'Actinidia08414' => 'ach', 'Actinidia15289' => 'ach', 'Actinidia19871' => 'ach', 'Actinidia21475' => 'ach', 'Actinidia22576' => 'ach', 'Actinidia28327' => 'ach', 'Actinidia32491' => 'ach', 'Actinidia39463' => 'ach', 'Actinidia39571' => 'ach', 'Ah.01g013750' => 'amhyb', 'Ah.01g023210' => 'amhyb', 'Ah.04g164850' => 'amhyb', 'Ah.05g178060' => 'amhyb', 'Ah.07g204270' => 'amhyb', 'Ah.07g208480' => 'amhyb', 'Ah.09g237410' => 'amhyb', 'Ah.14g089460' => 'amhyb', 'AL1G41790' => 'aly', 'AL1G49050' => 'aly', 'AL1G53810' => 'aly', 'AL1G61400' => 'aly', 'AL4G18580' => 'aly', 'AL5G12510' => 'aly', 'AL5G12540' => 'aly', 'AL6G43230' => 'aly', 'AL7G10370' => 'aly', 'AL7G19250' => 'aly', 'AL8G12240' => 'aly', 'AL8G18540' => 'aly', 'Aqoxy1G02409' => 'aox', 'Aqoxy2G03993' => 'aox', 'Aqoxy3G03357' => 'aox', 'Aqoxy4G00785' => 'aox', 'Aqoxy5G02598' => 'aox', 'Aqoxy6G00132' => 'aox', 'Aqoxy7G01776' => 'aox', 'Aqoxy7G02316' => 'aox', 'Aqoxy7G03973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.12AFKW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B8730' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27IQR1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3F75VG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3RE0GA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41TCQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.527VTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FIR39' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5W8UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DA38EV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ63HS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H1I32C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HC27T5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4M8AP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7N3CZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9UVDZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LS1NQA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT1D4B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SKC4TM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCFV76' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF9Q1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQWD9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1ZM88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WE07RT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YCK7VH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJE6Q6' => 'arhy', 'AT1G28240' => 'ath', 'AT1G34550' => 'ath', 'AT1G53040' => 'ath', 'AT2G02910' => 'ath', 'AT4G09630' => 'ath', 'AT4G38500' => 'ath', 'AT5G42660' => 'ath', 'AT5G46220' => 'ath', 'ATR0152G026' => 'atr', 'ATR0564G343' => 'atr', 'ATR0706G151' => 'atr', 'ATR0733G207' => 'atr', 'ATR0751G234' => 'atr', 'ATR0807G048' => 'atr', 'ATR1091G084' => 'atr', 'Atru.chr10.1229' => 'acertr', 'Atru.chr10.1230' => 'acertr', 'Atru.chr10.1874' => 'acertr', 'Atru.chr11.1808' => 'acertr', 'Atru.chr13.1795' => 'acertr', 'Atru.chr13.570' => 'acertr', 'Atru.chr2.2608' => 'acertr', 'Atru.chr2.2609' => 'acertr', 'Atru.chr5.3428' => 'acertr', 'Atru.chr8.1171' => 'acertr', 'AUR62004651' => 'cqu', 'AUR62008675' => 'cqu', 'AUR62010014' => 'cqu', 'AUR62013004' => 'cqu', 'AUR62014825' => 'cqu', 'AUR62015015' => 'cqu', 'AUR62015151' => 'cqu', 'AUR62017020' => 'cqu', 'AUR62019422' => 'cqu', 'AUR62023570' => 'cqu', 'AUR62025571' => 'cqu', 'AUR62029098' => 'cqu', 'AUR62033863' => 'cqu', 'AUR62034296' => 'cqu', 'AUR62040075' => 'cqu', 'BcaB02g07334' => 'bca', 'BcaB02g10575' => 'bca', 'BcaB03g12119' => 'bca', 'BcaB03g12120' => 'bca', 'BcaB03g13945' => 'bca', 'BcaB04g17123' => 'bca', 'BcaB04g17867' => 'bca', 'BcaB04g19839' => 'bca', 'BcaB07g30317' => 'bca', 'BcaB07g32432' => 'bca', 'BcaB07g33362' => 'bca', 'BcaB08g36611' => 'bca', 'BcaC01g00028' => 'bca', 'BcaC01g01356' => 'bca', 'BcaC01g02034' => 'bca', 'BcaC01g06051' => 'bca', 'BcaC03g16839' => 'bca', 'BcaC03g17176' => 'bca', 'BcaC05g26829' => 'bca', 'BcaC06g31490' => 'bca', 'BcaC06g35344' => 'bca', 'BcaC06g36570' => 'bca', 'BcaC07g37537' => 'bca', 'BcaC08g43491' => 'bca', 'BcaC08g43773' => 'bca', 'BcaNung00234' => 'bca', 'BcaNung01982' => 'bca', 'BcaNung03707' => 'bca', 'BcaNung06454' => 'bca', 'BolC2t10762H' => 'bol', 'BolC2t11191H' => 'bol', 'BolC3t14322H' => 'bol', 'BolC3t19747H' => 'bol', 'BolC3t21425H' => 'bol', 'BolC4t27800H' => 'bol', 'BolC5t31423H' => 'bol', 'BolC6t35951H' => 'bol', 'BolC6t36282H' => 'bol', 'BolC7t40678H' => 'bol', 'BolC7t40679H' => 'bol', 'BolC7t42222H' => 'bol', 'BolC7t43492H' => 'bol', 'BolC7t46785H' => 'bol', 'BolC8t47853H' => 'bol', 'BolC9t56805H' => 'bol', 'BraA02t08000Z' => 'bra', 'BraA02t08341Z' => 'bra', 'BraA03t10936Z' => 'bra', 'BraA03t15657Z' => 'bra', 'BraA04t18100Z' => 'bra', 'BraA05t20523Z' => 'bra', 'BraA06t23353Z' => 'bra', 'BraA06t27473Z' => 'bra', 'BraA06t27769Z' => 'bra', 'BraA07t28928Z' => 'bra', 'BraA08t32236Z' => 'bra', 'BraA08t32841Z' => 'bra', 'BraA08t34524Z' => 'bra', 'BraA09t38742Z' => 'bra', 'BraA09t39295Z' => 'bra', 'C02p47180' => 'bna', 'C02p50990' => 'bna', 'C03p19360' => 'bna', 'C03p74950' => 'bna', 'C03p91000' => 'bna', 'C04p63260' => 'bna', 'C05p27050' => 'bna', 'C06p08750' => 'bna', 'C06p11490' => 'bna', 'C07p02820' => 'bna', 'C07p17180' => 'bna', 'C07p29440' => 'bna', 'C07p63730' => 'bna', 'C09p39260' => 'bna', 'CAN.G1164.34' => 'can', 'CAN.G1164.39' => 'can', 'CAN.G1530.3' => 'can', 'CAN.G162.61' => 'can', 'CAN.G176.6' => 'can', 'CAN.G289.49' => 'can', 'CAN.G370.21' => 'can', 'CAN.G370.22' => 'can', 'CAN.G371.117' => 'can', 'CAN.G58.37' => 'can', 'CAN.G588.98' => 'can', 'CANSAT21G2266' => 'cansat', 'CANSAT25G2799' => 'cansat', 'CANSAT35G0862' => 'cansat', 'CANSAT35G1704' => 'cansat', 'CANSAT35G1760' => 'cansat', 'CANSAT56G3971' => 'cansat', 'CANSAT56G4116' => 'cansat', 'CANSAT80G1259' => 'cansat', 'CARHR027730' => 'chi', 'CARHR033880' => 'chi', 'CARHR043270' => 'chi', 'CARHR145330' => 'chi', 'CARHR145340' => 'chi', 'CARHR175570' => 'chi', 'CARHR181570' => 'chi', 'CARHR258470' => 'chi', 'CARHR260490' => 'chi', 'CARHR294220' => 'chi', 'Carub.0001s2668' => 'cru', 'Carub.0001s3257' => 'cru', 'Carub.0001s4220' => 'cru', 'Carub.0005s0179' => 'cru', 'Carub.0006s2807' => 'cru', 'Carub.0007s0039' => 'cru', 'Carub.0008s0169' => 'cru', 'Carub.0008s0636' => 'cru', 'Ca_00338_v3' => 'car', 'Ca_00542_v3' => 'car', 'Ca_01844_v3' => 'car', 'Ca_10611_v3' => 'car', 'Ca_13326_v3' => 'car', 'Ca_17944_v3' => 'car', 'Ca_18546_v3' => 'car', 'Ca_24219_v3' => 'car', 'Ca_29972_v3' => 'car', 'CBR_g3681' => 'cbr', 'CBR_g40021' => 'cbr', 'Cc01_g08140' => 'ccan', 'Cc02_g13410' => 'ccan', 'Cc02_g37480' => 'ccan', 'Cc05_g12030' => 'ccan', 'Cc09_g03370' => 'ccan', 'Cc09_g10300' => 'ccan', 'Cc10_g03530' => 'ccan', 'Cc10_g11380' => 'ccan', 'CDE01G0176' => 'cde', 'CDE02G0675' => 'cde', 'CDE02G0942' => 'cde', 'CDE02G1153' => 'cde', 'CDE02G4177' => 'cde', 'CDE04G2117' => 'cde', 'CDE04G2736' => 'cde', 'CDE08G1161' => 'cde', 'CDE09G1238' => 'cde', 'Cfa000467' => 'cfa', 'Cfa000947' => 'cfa', 'Cfa004969' => 'cfa', 'Cfa005284' => 'cfa', 'Cfa008993' => 'cfa', 'Cfa018187' => 'cfa', 'Cfa018454' => 'cfa', 'Cfa020585' => 'cfa', 'Ciclev10000424m.g' => 'ccl', 'Ciclev10003605m.g' => 'ccl', 'Ciclev10007828m.g' => 'ccl', 'Ciclev10014620m.g' => 'ccl', 'Ciclev10015169m.g' => 'ccl', 'Ciclev10018291m.g' => 'ccl', 'Ciclev10028256m.g' => 'ccl', 'Ciclev10033822m.g' => 'ccl', 'CiPaw.05G060300' => 'cil', 'CiPaw.05G085000' => 'cil', 'CiPaw.06G083700' => 'cil', 'CiPaw.06G120300' => 'cil', 'CiPaw.09G060500' => 'cil', 'CiPaw.09G123800' => 'cil', 'CiPaw.11G169700' => 'cil', 'CiPaw.12G118300' => 'cil', 'CiPaw.15G071000' => 'cil', 'CiPaw.15G081900' => 'cil', 'ClCG01G024610' => 'cla', 'ClCG03G006070' => 'cla', 'ClCG05G019250' => 'cla', 'ClCG09G009500' => 'cla', 'ClCG11G008200' => 'cla', 'ClCG11G018080' => 'cla', 'COL.COLO4_17373' => 'col', 'COL.COLO4_22994' => 'col', 'COL.COLO4_26389' => 'col', 'COL.COLO4_27170' => 'col', 'COL.COLO4_31074' => 'col', 'COL.COLO4_31465' => 'col', 'COL.COLO4_36438' => 'col', 'COL.COLO4_36439' => 'col', 'Cpa.g.c38781' => 'cpa', 'Cpa.g.sc128.12' => 'cpa', 'Cpa.g.sc166.7' => 'cpa', 'Cpa.g.sc166.8' => 'cpa', 'Cpa.g.sc20.111' => 'cpa', 'Cpa.g.sc27.31' => 'cpa', 'Cpa.g.sc64.36' => 'cpa', 'Cpa.g.sc64.37' => 'cpa', 'Cpa.g.sc66.49' => 'cpa', 'Cpa.g.sc80.64' => 'cpa', 'CsaV3_1G012320' => 'csa', 'CsaV3_2G008480' => 'csa', 'CsaV3_2G033450' => 'csa', 'CsaV3_3G044830' => 'csa', 'CsaV3_4G033710' => 'csa', 'CsaV3_6G051730' => 'csa', 'CsaV3_7G025350' => 'csa', 'CSS0001067' => 'camsi', 'CSS0005996' => 'camsi', 'CSS0006590' => 'camsi', 'CSS0009673' => 'camsi', 'CSS0010201' => 'camsi', 'CSS0010549' => 'camsi', 'CSS0011364' => 'camsi', 'CSS0014473' => 'camsi', 'CSS0014961' => 'camsi', 'CSS0020191' => 'camsi', 'CSS0021165' => 'camsi', 'CSS0022306' => 'camsi', 'CSS0030591' => 'camsi', 'CSS0030696' => 'camsi', 'CSS0032653' => 'camsi', 'CSS0037487' => 'camsi', 'CSS0041102' => 'camsi', 'CSS0041261' => 'camsi', 'CSS0046246' => 'camsi', 'CSS0049256' => 'camsi', 'DCAR_004075' => 'dca', 'DCAR_011538' => 'dca', 'DCAR_019553' => 'dca', 'DCAR_020952' => 'dca', 'DCAR_021739' => 'dca', 'DCAR_027407' => 'dca', 'DCAR_027913' => 'dca', 'DCAR_028066' => 'dca', 'Dinv05899' => 'din', 'Dinv07563' => 'din', 'Dinv08010' => 'din', 'Dinv14125' => 'din', 'Dinv20172' => 'din', 'Dinv30743' => 'din', 'Dinv31229' => 'din', 'Dinv34162' => 'din', 'Dinv36028' => 'din', 'Dinv39368' => 'din', 'Dinv40565' => 'din', 'Dinv41706' => 'din', 'Duzib052G0089' => 'dzi', 'Duzib116G0641' => 'dzi', 'Duzib132G0069' => 'dzi', 'Duzib132G1219' => 'dzi', 'Duzib147G0278' => 'dzi', 'Duzib160G0480' => 'dzi', 'Duzib170G0661' => 'dzi', 'Duzib177G0591' => 'dzi', 'Duzib187G1353' => 'dzi', 'Duzib192G0858' => 'dzi', 'Duzib192G0883' => 'dzi', 'Duzib213G0506' => 'dzi', 'Duzib235G0289' => 'dzi', 'Duzib251G0422' => 'dzi', 'ECA232G3898' => 'eca', 'ECA233G5950' => 'eca', 'ECA234G1699' => 'eca', 'ECA234G2421' => 'eca', 'ECA236G0426' => 'eca', 'ECA236G4331' => 'eca', 'ECA248G2573' => 'eca', 'EL10Ac1g00077' => 'bvu', 'EL10Ac1g01746' => 'bvu', 'EL10Ac2g03464' => 'bvu', 'EL10Ac4g08176' => 'bvu', 'EL10Ac7g17521' => 'bvu', 'EL10Ac8g20386' => 'bvu', 'EL10Ac9g21343' => 'bvu', 'EL10Ac9g22688' => 'bvu', 'Eucgr.B03434' => 'egr', 'Eucgr.D00618' => 'egr', 'Eucgr.E02395' => 'egr', 'Eucgr.F01129' => 'egr', 'Eucgr.F02622' => 'egr', 'Eucgr.F04207' => 'egr', 'FAN01G0570' => 'fan', 'FAN03G3351' => 'fan', 'FAN06G3702' => 'fan', 'FAN07G2149' => 'fan', 'FAN10G3758' => 'fan', 'FAN11G1170' => 'fan', 'FAN11G2050' => 'fan', 'FAN11G2724' => 'fan', 'FAN12G1700' => 'fan', 'FAN12G2028' => 'fan', 'FAN15G1160' => 'fan', 'FAN15G3063' => 'fan', 'FAN16G2540' => 'fan', 'FAN16G3077' => 'fan', 'FAN16G3624' => 'fan', 'FAN17G0221' => 'fan', 'FAN20G2492' => 'fan', 'FAN20G2905' => 'fan', 'FAN21G0548' => 'fan', 'FAN21G1300' => 'fan', 'FAN22G0077' => 'fan', 'FAN22G1315' => 'fan', 'FAN24G1280' => 'fan', 'FAN24G1445' => 'fan', 'FAN24G3527' => 'fan', 'FAN25G0464' => 'fan', 'FAN25G2885' => 'fan', 'FAN25G3270' => 'fan', 'FAN27G1101' => 'fan', 'FAN27G2846' => 'fan', 'FAN27G3524' => 'fan', 'FvH4_2g11770' => 'fve', 'FvH4_2g15630' => 'fve', 'FvH4_3g05570' => 'fve', 'FvH4_3g09110' => 'fve', 'FvH4_3g19940' => 'fve', 'FvH4_4g04821' => 'fve', 'FvH4_4g31480' => 'fve', 'FvH4_7g01740' => 'fve', 'Glyma.05G130400' => 'gma', 'Glyma.05G156400' => 'gma', 'Glyma.07G197000' => 'gma', 'Glyma.08G085151' => 'gma', 'Glyma.08G114500' => 'gma', 'Glyma.08G300400' => 'gma', 'Glyma.10G215800' => 'gma', 'Glyma.12G224400' => 'gma', 'Glyma.13G179300' => 'gma', 'Glyma.13G218151' => 'gma', 'Glyma.13G238800' => 'gma', 'Glyma.13G276900' => 'gma', 'Glyma.14G078200' => 'gma', 'Glyma.15G074500' => 'gma', 'Glyma.15G094100' => 'gma', 'Glyma.17G247200' => 'gma', 'Glyma.18G120100' => 'gma', 'Glyma.20G176000' => 'gma', 'Gohir.A01G063600' => 'ghi', 'Gohir.A01G170301' => 'ghi', 'Gohir.A02G060500' => 'ghi', 'Gohir.A05G133850' => 'ghi', 'Gohir.A05G161400' => 'ghi', 'Gohir.A06G012900' => 'ghi', 'Gohir.A06G035901' => 'ghi', 'Gohir.A06G127100' => 'ghi', 'Gohir.A06G210500' => 'ghi', 'Gohir.A08G008650' => 'ghi', 'Gohir.A09G072700' => 'ghi', 'Gohir.A09G088301' => 'ghi', 'Gohir.A10G040600' => 'ghi', 'Gohir.A12G036300' => 'ghi', 'Gohir.A12G143350' => 'ghi', 'Gohir.A12G165500' => 'ghi', 'Gohir.A13G145700' => 'ghi', 'Gohir.D01G050000' => 'ghi', 'Gohir.D01G051366' => 'ghi', 'Gohir.D01G161350' => 'ghi', 'Gohir.D02G065900' => 'ghi', 'Gohir.D05G164200' => 'ghi', 'Gohir.D05G355500' => 'ghi', 'Gohir.D06G010400' => 'ghi', 'Gohir.D06G111250' => 'ghi', 'Gohir.D06G132000' => 'ghi', 'Gohir.D06G210500' => 'ghi', 'Gohir.D07G165675' => 'ghi', 'Gohir.D08G062240' => 'ghi', 'Gohir.D08G086101' => 'ghi', 'Gohir.D08G138060' => 'ghi', 'Gohir.D09G072300' => 'ghi', 'Gohir.D10G041400' => 'ghi', 'Gohir.D11G191020' => 'ghi', 'Gohir.D11G212066' => 'ghi', 'Gohir.D12G036300' => 'ghi', 'Gohir.D12G168600' => 'ghi', 'Gohir.D13G150600' => 'ghi', 'Gorai.001G057300' => 'gra', 'Gorai.002G069900' => 'gra', 'Gorai.002G200000' => 'gra', 'Gorai.003G067600' => 'gra', 'Gorai.005G074800' => 'gra', 'Gorai.006G087300' => 'gra', 'Gorai.008G037500' => 'gra', 'Gorai.008G181400' => 'gra', 'Gorai.009G169400' => 'gra', 'Gorai.009G387900' => 'gra', 'Gorai.010G013300' => 'gra', 'Gorai.010G153800' => 'gra', 'Gorai.010G255800' => 'gra', 'Gorai.011G043700' => 'gra', 'Gorai.011G198900' => 'gra', 'Gorai.013G168400' => 'gra', 'GSVIVG01005212001' => 'vvi', 'GSVIVG01006163001' => 'vvi', 'GSVIVG01009625001' => 'vvi', 'GSVIVG01014338001' => 'vvi', 'GSVIVG01020005001' => 'vvi', 'GSVIVG01021450001' => 'vvi', 'GSVIVG01023975001' => 'vvi', 'GSVIVG01034490001' => 'vvi', 'HanXRQChr04g0112071' => 'han', 'HanXRQChr05g0131151' => 'han', 'HanXRQChr09g0262371' => 'han', 'HanXRQChr09g0268401' => 'han', 'HanXRQChr10g0279241' => 'han', 'HanXRQChr10g0297961' => 'han', 'HanXRQChr11g0326231' => 'han', 'HanXRQChr11g0328471' => 'han', 'HanXRQChr16g0507941' => 'han', 'HanXRQChr17g0560211' => 'han', 'Haze_02108' => 'cav', 'Haze_02428' => 'cav', 'Haze_05593' => 'cav', 'Haze_06448' => 'cav', 'Haze_09427' => 'cav', 'Haze_12022' => 'cav', 'Haze_17612' => 'cav', 'Haze_17928' => 'cav', 'Hma1.2p1_0032F.1_g019250' => 'hma', 'Hma1.2p1_0163F.1_g072690' => 'hma', 'Hma1.2p1_0265F.1_g106710' => 'hma', 'Hma1.2p1_0286F.1_g113970' => 'hma', 'Hma1.2p1_0363F.1_g136640' => 'hma', 'Hma1.2p1_0584F.1_g183470' => 'hma', 'Hma1.2p1_0885F.1_g232570' => 'hma', 'HPP92_006022' => 'vpl', 'HPP92_007320' => 'vpl', 'HPP92_011521' => 'vpl', 'HPP92_019387' => 'vpl', 'HPP92_024038' => 'vpl', 'Hund05891' => 'sun', 'Hund06450' => 'sun', 'Hund12053' => 'sun', 'Hund16800' => 'sun', 'Hund21222' => 'sun', 'Hund22896' => 'sun', 'Hund23746' => 'sun', 'Hund27083' => 'sun', 'Lalb_Chr02g0141831' => 'lal', 'Lalb_Chr02g0141841' => 'lal', 'Lalb_Chr05g0220411' => 'lal', 'Lalb_Chr06g0162081' => 'lal', 'Lalb_Chr09g0327651' => 'lal', 'Lalb_Chr13g0295051' => 'lal', 'Lalb_Chr15g0086801' => 'lal', 'Lalb_Chr16g0383781' => 'lal', 'Lalb_Chr16g0383791' => 'lal', 'Lalb_Chr18g0055441' => 'lal', 'Lalb_Chr18g0059611' => 'lal', 'Lalb_Chr20g0109661' => 'lal', 'Lalb_Chr20g0109831' => 'lal', 'Lalb_Chr20g0121871' => 'lal', 'Lalb_Chr22g0355361' => 'lal', 'Lalb_Chr25g0286371' => 'lal', 'Lj1A1187G43' => 'lonja', 'Lj1A1205T50' => 'lonja', 'Lj1A800G33' => 'lonja', 'Lj1C1187T7' => 'lonja', 'Lj1C843T11' => 'lonja', 'Lj1g0010940' => 'lja', 'Lj2A288T69' => 'lonja', 'Lj3g0024276' => 'lja', 'Lj4A47T76' => 'lonja', 'Lj4g0005805' => 'lja', 'Lj4g0006097' => 'lja', 'Lj4g0008528' => 'lja', 'Lj4g0024907' => 'lja', 'Lj5g0012472' => 'lja', 'Lj5g0018648' => 'lja', 'Lj6C789G1' => 'lonja', 'Lj6g0004000' => 'lja', 'Lj7A292G67' => 'lonja', 'Lj7A292T64' => 'lonja', 'Lj9A400T58' => 'lonja', 'Lsat_1_v5_gn_1_126181' => 'lsa', 'Lsat_1_v5_gn_4_123041' => 'lsa', 'Lsat_1_v5_gn_4_133620' => 'lsa', 'Lsat_1_v5_gn_4_53221' => 'lsa', 'Lsat_1_v5_gn_4_71961' => 'lsa', 'Lsat_1_v5_gn_7_105241' => 'lsa', 'Lsat_1_v5_gn_7_21361' => 'lsa', 'Lsat_1_v5_gn_7_28860' => 'lsa', 'Lsat_1_v5_gn_7_31260' => 'lsa', 'Lsat_1_v5_gn_8_52801' => 'lsa', 'Manes.02G191400' => 'mes', 'Manes.03G110100' => 'mes', 'Manes.04G071100' => 'mes', 'Manes.05G100500' => 'mes', 'Manes.05G164700' => 'mes', 'Manes.15G087000' => 'mes', 'Manes.15G121500' => 'mes', 'Manes.16G028300' => 'mes', 'Manes.17G046100' => 'mes', 'Manes.17G069800' => 'mes', 'Manes.18G100500' => 'mes', 'Mapoly0002s0109' => 'mpo', 'Mapoly0024s0007' => 'mpo', 'Mapoly0089s0032' => 'mpo', 'MBI04_g42241_MAGBIO' => 'mbi', 'MBI05_g11988_MAGBIO' => 'mbi', 'MBI05_g35452_MAGBIO' => 'mbi', 'MBI07_g30179_MAGBIO' => 'mbi', 'MBI07_g35859_MAGBIO' => 'mbi', 'MBI07_g35860_MAGBIO' => 'mbi', 'MBI07_g37166_MAGBIO' => 'mbi', 'MBI08_g18172_MAGBIO' => 'mbi', 'MBI09_g08441_MAGBIO' => 'mbi', 'MBI13_g01676_MAGBIO' => 'mbi', 'MBI14_g42955_MAGBIO' => 'mbi', 'MBI16_g13161_MAGBIO' => 'mbi', 'MBI17_g27204_MAGBIO' => 'mbi', 'MBI19_g21595_MAGBIO' => 'mbi', 'MD00G1148400' => 'mdo', 'MD02G1301200' => 'mdo', 'MD03G1227800' => 'mdo', 'MD05G1041100' => 'mdo', 'MD05G1124800' => 'mdo', 'MD05G1284000' => 'mdo', 'MD05G1338800' => 'mdo', 'MD05G1338900' => 'mdo', 'MD07G1022800' => 'mdo', 'MD10G1047500' => 'mdo', 'MD10G1127500' => 'mdo', 'MD10G1262300' => 'mdo', 'MD10G1293800' => 'mdo', 'MD16G1074300' => 'mdo', 'Medtr1g021670' => 'mtr', 'Medtr1g096320' => 'mtr', 'Medtr2g013690' => 'mtr', 'Medtr2g019450' => 'mtr', 'Medtr2g085170' => 'mtr', 'Medtr4g088785' => 'mtr', 'Medtr8g055930' => 'mtr', 'Medtr8g085850' => 'mtr', 'MELO3C002605.2' => 'cme', 'MELO3C003891.2' => 'cme', 'MELO3C004012.2' => 'cme', 'MELO3C007134.2' => 'cme', 'MELO3C008118.2' => 'cme', 'MELO3C016700.2' => 'cme', 'MELO3C024127.2' => 'cme', 'MELO3C033361.2' => 'cme', 'MELO3C033362.2' => 'cme', 'Migut.C00430' => 'egut', 'Migut.C01246' => 'egut', 'Migut.E00101' => 'egut', 'Migut.H01486' => 'egut', 'Migut.H01939' => 'egut', 'Migut.K00360' => 'egut', 'Migut.M00910' => 'egut', 'Migut.M01139' => 'egut', 'Migut.N02677' => 'egut', 'MSTRG.13252' => 'ama', 'MSTRG.14701' => 'ama', 'MSTRG.1521' => 'ama', 'MSTRG.15884' => 'ama', 'MSTRG.16242' => 'ama', 'MSTRG.22285' => 'ama', 'MSTRG.22444' => 'ama', 'MSTRG.2349' => 'ama', 'MSTRG.26308' => 'ama', 'MSTRG.28296' => 'ama', 'MSTRG.9895' => 'ama', 'Nitab4.5_0000110g0060' => 'nta', 'Nitab4.5_0000420g0130' => 'nta', 'Nitab4.5_0000422g0030' => 'nta', 'Nitab4.5_0000560g0180' => 'nta', 'Nitab4.5_0000703g0100' => 'nta', 'Nitab4.5_0000786g0200' => 'nta', 'Nitab4.5_0001336g0020' => 'nta', 'Nitab4.5_0001796g0030' => 'nta', 'Nitab4.5_0003348g0060' => 'nta', 'Nitab4.5_0003698g0040' => 'nta', 'Nitab4.5_0003942g0090' => 'nta', 'Nitab4.5_0004775g0070' => 'nta', 'Nitab4.5_0004864g0030' => 'nta', 'Nitab4.5_0005615g0020' => 'nta', 'Nitab4.5_0009288g0030' => 'nta', 'Nitab4.5_0009341g0010' => 'nta', 'Nitab4.5_0009535g0010' => 'nta', 'Nn1g03995' => 'nnu', 'Nn1g04100' => 'nnu', 'Nn1g06530' => 'nnu', 'Nn3g16404' => 'nnu', 'Nn3g17212' => 'nnu', 'Nn3g20776' => 'nnu', 'Nn3g21923' => 'nnu', 'Nn5g27737' => 'nnu', 'Nn5g29461' => 'nnu', 'Nn7g38355' => 'nnu', 'Nn8g39873' => 'nnu', 'Oeu000548.2' => 'oeu', 'Oeu004672.1' => 'oeu', 'Oeu015605.2' => 'oeu', 'Oeu016092.1' => 'oeu', 'Oeu017879.3' => 'oeu', 'Oeu024910.1' => 'oeu', 'Oeu028965.1' => 'oeu', 'Oeu031269.1' => 'oeu', 'Oeu031270.1' => 'oeu', 'Oeu032535.1' => 'oeu', 'Oeu034151.1' => 'oeu', 'Oeu034152.1' => 'oeu', 'Oeu034588.2' => 'oeu', 'Oeu050846.1' => 'oeu', 'Oeu050849.2' => 'oeu', 'Oeu051063.2' => 'oeu', 'Oeu052368.1' => 'oeu', 'Oeu052370.1' => 'oeu', 'Os01g0210400' => 'osa', 'Os01g0304300' => 'osa', 'Os01g0749100' => 'osa', 'Os02g0745800' => 'osa', 'Os03g0769050' => 'osa', 'Os05g0531500' => 'osa', 'Os06g0724300' => 'osa', 'Os11g0198100' => 'osa', 'Peaxi162Scf00069g01425' => 'pax', 'Peaxi162Scf00280g00811' => 'pax', 'Peaxi162Scf00310g00615' => 'pax', 'Peaxi162Scf00362g00542' => 'pax', 'Peaxi162Scf00461g00310' => 'pax', 'Peaxi162Scf00530g00118' => 'pax', 'Peaxi162Scf00541g00057' => 'pax', 'Peaxi162Scf00661g00017' => 'pax', 'Peaxi162Scf00926g00027' => 'pax', 'Peaxi162Scf01064g00263' => 'pax', 'Peaxi162Scf01211g00135' => 'pax', 'PGR004G2336' => 'pgr', 'PGR042G0327' => 'pgr', 'PGR042G1957' => 'pgr', 'PGR042G2003' => 'pgr', 'PGR042G3929' => 'pgr', 'PGR083G1137' => 'pgr', 'PGR083G1364' => 'pgr', 'PGSC0003DMG400003381' => 'stu', 'PGSC0003DMG400003417' => 'stu', 'PGSC0003DMG400008981' => 'stu', 'PGSC0003DMG400012417' => 'stu', 'PGSC0003DMG400012823' => 'stu', 'PGSC0003DMG400016885' => 'stu', 'PGSC0003DMG400022812' => 'stu', 'PGSC0003DMG400029726' => 'stu', 'PGSC0003DMG401009243' => 'stu', 'PGSC0003DMG401031505' => 'stu', 'PGSC0003DMG402031505' => 'stu', 'Phvul.001G017600' => 'pvu', 'Phvul.002G193500' => 'pvu', 'Phvul.002G228900' => 'pvu', 'Phvul.002G236800' => 'pvu', 'Phvul.003G049500' => 'pvu', 'Phvul.005G072000' => 'pvu', 'Phvul.006G164800' => 'pvu', 'Phvul.006G185100' => 'pvu', 'Phvul.007G090000' => 'pvu', 'Potri.001G399800' => 'ptr', 'Potri.002G149900' => 'ptr', 'Potri.004G044100' => 'ptr', 'Potri.004G177600' => 'ptr', 'Potri.009G138000' => 'ptr', 'Potri.010G094000' => 'ptr', 'Potri.011G053000' => 'ptr', 'Potri.011G119300' => 'ptr', 'Potri.013G113700' => 'ptr', 'Potri.018G107800' => 'ptr', 'Potri.019G084100' => 'ptr', 'Pp3c14_23720' => 'ppa', 'Pp3c16_6340' => 'ppa', 'Pp3c23_13420' => 'ppa', 'Pp3c24_2740' => 'ppa', 'Pp3c25_860' => 'ppa', 'Pp3c8_21750' => 'ppa', 'Prupe.1G273000' => 'ppe', 'Prupe.1G273700' => 'ppe', 'Prupe.1G274100' => 'ppe', 'Prupe.2G023300' => 'ppe', 'Prupe.4G048000' => 'ppe', 'Prupe.4G080400' => 'ppe', 'Prupe.4G181200' => 'ppe', 'Prupe.8G056900' => 'ppe', 'Prupe.8G168700' => 'ppe', 'Psat1g189080' => 'psa', 'Psat1g204760' => 'psa', 'Psat4g175560' => 'psa', 'Psat4g177720' => 'psa', 'Psat5g244240' => 'psa', 'Psat6g010720' => 'psa', 'Psat6g187200' => 'psa', 'Psat7g072040' => 'psa', 'PSO017G3501' => 'pso', 'PSO063G2148' => 'pso', 'PSO063G5608' => 'pso', 'PSO210G6392' => 'pso', 'PSO541G2319' => 'pso', 'PSO541G2836' => 'pso', 'PSO541G4012' => 'pso', 'PSO541G6253' => 'pso', 'PSO675G0580' => 'pso', 'PSO675G0856' => 'pso', 'PSO675G5635' => 'pso', 'PSO675G9157' => 'pso', 'PSO832G1660' => 'pso', 'PSO832G1969' => 'pso', 'QL02p007186' => 'qlo', 'QL02p033904' => 'qlo', 'QL03p064391' => 'qlo', 'QL05p040593' => 'qlo', 'QL05p058242' => 'qlo', 'QL08p021825' => 'qlo', 'QL11p004981' => 'qlo', 'RcHm_v2.0_Chr1g0318301' => 'rch', 'RcHm_v2.0_Chr4g0418501' => 'rch', 'RcHm_v2.0_Chr4g0439971' => 'rch', 'RcHm_v2.0_Chr5g0008541' => 'rch', 'RcHm_v2.0_Chr5g0014101' => 'rch', 'RcHm_v2.0_Chr5g0014131' => 'rch', 'RcHm_v2.0_Chr5g0033621' => 'rch', 'RcHm_v2.0_Chr6g0272041' => 'rch', 'RcHm_v2.0_Chr6g0278831' => 'rch', 'Rhsim02G0130400' => 'rsi', 'Rhsim02G0171100' => 'rsi', 'Rhsim05G0053000' => 'rsi', 'Rhsim05G0053100' => 'rsi', 'Rhsim06G0096500' => 'rsi', 'Rhsim06G0096600' => 'rsi', 'Rhsim06G0199100' => 'rsi', 'Rhsim12G0062300' => 'rsi', 'Rhsim12G0062800' => 'rsi', 'Sabra02G0118600' => 'sbr', 'Sabra04G0027300' => 'sbr', 'Sabra04G0119500' => 'sbr', 'Sabra08G0112500' => 'sbr', 'Sabra11G0036800' => 'sbr', 'Sabra11G0103800' => 'sbr', 'Sabra13G0096300' => 'sbr', 'Sabra16G0262300' => 'sbr', 'Sabra18G0091700' => 'sbr', 'Sabra19G0095400' => 'sbr', 'SalBow6G3080' => 'sbo', 'SalBow7G1157' => 'sbo', 'SalBow7G2123' => 'sbo', 'SalBow7G2285' => 'sbo', 'SalBow7G3537' => 'sbo', 'SalBow8G2947' => 'sbo', 'SalBow8G4463' => 'sbo', 'SalBow8G5466' => 'sbo', 'Sc01g0001750' => 'sci', 'Sc02g0006640' => 'sci', 'Sc02g0006670' => 'sci', 'Sc04g0008220' => 'sci', 'Sc05g0006190' => 'sci', 'Sc08g0002760' => 'sci', 'Sc17g0006170' => 'sci', 'Sc22g0002050' => 'sci', 'Sc23g0001190' => 'sci', 'Sc24g0000980' => 'sci', 'Sed0006245' => 'sed', 'Sed0007543' => 'sed', 'Sed0009411' => 'sed', 'Sed0010765' => 'sed', 'Sed0012944' => 'sed', 'Sed0014682' => 'sed', 'Sed0016174' => 'sed', 'Sed0016796' => 'sed', 'Sed0020317' => 'sed', 'Sed0021467' => 'sed', 'SEGI_01316' => 'sgi', 'SEGI_03374' => 'sgi', 'SEGI_16265' => 'sgi', 'SEGI_18569' => 'sgi', 'SEGI_20351' => 'sgi', 'SEGI_26395' => 'sgi', 'SEGI_29469' => 'sgi', 'SEGI_34771' => 'sgi', 'SEGI_36769' => 'sgi', 'SEGI_37139' => 'sgi', 'SGA_v2.0_scaffold100G29687' => 'sas', 'SGA_v2.0_scaffold118G32472' => 'sas', 'SGA_v2.0_scaffold14G07051' => 'sas', 'SGA_v2.0_scaffold183G39845' => 'sas', 'SGA_v2.0_scaffold1G00174' => 'sas', 'SGA_v2.0_scaffold22G09714' => 'sas', 'SGA_v2.0_scaffold333G48992' => 'sas', 'SGA_v2.0_scaffold46G17491' => 'sas', 'SGA_v2.0_scaffold49G18294' => 'sas', 'SGA_v2.0_scaffold63G21658' => 'sas', 'SHI01741' => 'shi', 'SHI05771' => 'shi', 'SHI18077' => 'shi', 'SHI20525' => 'shi', 'SHI20527' => 'shi', 'SHI20528' => 'shi', 'SMO172G0185' => 'smo', 'SMO198G0020' => 'smo', 'SMO351G0006' => 'smo', 'SMO356G0118' => 'smo', 'SMO358G0296' => 'smo', 'SMO367G0079' => 'smo', 'SMO367G1277' => 'smo', 'Solyc01g014220.3' => 'sly', 'Solyc01g111770.2' => 'sly', 'Solyc02g078180.3' => 'sly', 'Solyc03g006430.3' => 'sly', 'Solyc03g006456.1' => 'sly', 'Solyc03g079860.2' => 'sly', 'Solyc04g079770.3' => 'sly', 'Solyc05g007430.4' => 'sly', 'Solyc07g063150.3' => 'sly', 'Solyc08g016620.3' => 'sly', 'Solyc09g057590.3' => 'sly', 'Solyc09g057600.1' => 'sly', 'Solyc10g009050.3' => 'sly', 'Solyc11g017420.2' => 'sly', 'Sopen01g053810' => 'spe', 'Sopen02g023040' => 'spe', 'Sopen03g002440' => 'spe', 'Sopen04g033350' => 'spe', 'Sopen05g003310' => 'spe', 'Sopen07g004050' => 'spe', 'Sopen07g031340' => 'spe', 'Sopen08g006990' => 'spe', 'Sopen10g004830' => 'spe', 'Sopen11g009370' => 'spe', 'Sp1g24450' => 'spa', 'Sp1g29670' => 'spa', 'Sp1g39600' => 'spa', 'Sp2g11080' => 'spa', 'Sp2g13970' => 'spa', 'Sp4g16130' => 'spa', 'Sp6g13080' => 'spa', 'Sp7g37270' => 'spa', 'TAR371G0065' => 'tar', 'TAR376G0340' => 'tar', 'TAR376G0435' => 'tar', 'TAR381G0002' => 'tar', 'TAR381G1236' => 'tar', 'TAR624G0055' => 'tar', 'TAR624G0324' => 'tar', 'TAR624G0696' => 'tar', 'TAR624G0906' => 'tar', 'TAR625G0107' => 'tar', 'TAR626G0015' => 'tar', 'TAR626G1356' => 'tar', 'TAR627G0888' => 'tar', 'TAR628G0399' => 'tar', 'TAR628G1327' => 'tar', 'TAR629G2831' => 'tar', 'TAR629G2874' => 'tar', 'TAR633G1432' => 'tar', 'TAR633G2771' => 'tar', 'THA.LOC104803394' => 'tha', 'THA.LOC104805153' => 'tha', 'THA.LOC104806784' => 'tha', 'THA.LOC104810473' => 'tha', 'THA.LOC104813100' => 'tha', 'THA.LOC104814215' => 'tha', 'THA.LOC104815554' => 'tha', 'THA.LOC104820544' => 'tha', 'THA.LOC104824754' => 'tha', 'THA.LOC104827717' => 'tha', 'Thecc.02G031400' => 'tca', 'Thecc.02G055900' => 'tca', 'Thecc.02G350800' => 'tca', 'Thecc.06G150900' => 'tca', 'Thecc.06G186600' => 'tca', 'Thecc.07G089600' => 'tca', 'Thecc.08G020400' => 'tca', 'Thecc.08G182100' => 'tca', 'Thhalv10000873m.g' => 'esa', 'Thhalv10004185m.g' => 'esa', 'Thhalv10006981m.g' => 'esa', 'Thhalv10007204m.g' => 'esa', 'Thhalv10011374m.g' => 'esa', 'Thhalv10013482m.g' => 'esa', 'Thhalv10017801m.g' => 'esa', 'Thhalv10024983m.g' => 'esa', 'TPR.G12072' => 'tpr', 'TPR.G15769' => 'tpr', 'TPR.G16504' => 'tpr', 'TPR.G16506' => 'tpr', 'TPR.G24345' => 'tpr', 'TPR.G26666' => 'tpr', 'TPR.G27320' => 'tpr', 'TPR.G31819' => 'tpr', 'TPR.G38879' => 'tpr', 'TPR.G39015' => 'tpr', 'TPR.G8819' => 'tpr', 'TWI09G0924' => 'twi', 'TWI12G0811' => 'twi', 'TWI12G1294' => 'twi', 'TWI31G0150' => 'twi', 'TWI36G1262' => 'twi', 'TWI38G1287' => 'twi', 'TWI38G1633' => 'twi', 'TWI38G1982' => 'twi', 'TWI39G0116' => 'twi', 'TWI60G1011' => 'twi', 'TWI63G0171' => 'twi', 'TWI73G0839' => 'twi', 'TWI79G1511' => 'twi', 'unitig_0.g915' => 'ugi', 'unitig_0.g916' => 'ugi', 'unitig_21.g20219' => 'ugi', 'unitig_21.g20416' => 'ugi', 'unitig_578.g16132' => 'ugi', 'unitig_578.g16718' => 'ugi', 'unitig_62.g23481' => 'ugi', 'unitig_744.g24535' => 'ugi', 'unitig_749.g13525' => 'ugi', 'vmacro01248' => 'vma', 'vmacro02290' => 'vma', 'vmacro10946' => 'vma', 'vmacro11865' => 'vma', 'vmacro12493' => 'vma', 'vmacro17322' => 'vma', 'vmacro21599' => 'vma', 'vmacro23041' => 'vma', 'VMungo0251G0004' => 'vmu', 'VMungo0251G2639' => 'vmu', 'VMungo0251G2967' => 'vmu', 'VMungo0540G0864' => 'vmu', 'VMungo0540G1569' => 'vmu', 'VMungo0647G0317' => 'vmu', 'VMungo0720G1373' => 'vmu', 'VMungo0720G1508' => 'vmu', 'VMungo1080G0485' => 'vmu', 'VMungo1215G3177' => 'vmu', 'Zm00001eb112600' => 'zma', 'Zm00001eb120220' => 'zma', 'Zm00001eb153240' => 'zma', 'Zm00001eb168880' => 'zma', 'Zm00001eb213920' => 'zma', 'Zm00001eb228280' => 'zma', 'Zm00001eb254580' => 'zma', 'Zm00001eb272180' => 'zma', 'Zm00001eb293190' => 'zma', 'Zm00001eb322930' => 'zma', 'Zm00001eb353360' => 'zma', 'Zm00001eb353390' => 'zma', 'Zm00001eb353430' => 'zma', 'Zm00001eb353440' => 'zma', 'Zm00001eb353780' => 'zma' ) $gf_id = 'HOM05D000499' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000499' ) $data_identifier = 'HOM05D000499' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 29, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 12, 'amhyb' => (int) 8, 'aly' => (int) 12, 'aox' => (int) 9, 'arhy' => (int) 26, 'ath' => (int) 8, 'atr' => (int) 7, 'acertr' => (int) 10, 'cqu' => (int) 15, 'bca' => (int) 29, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 11, 'cansat' => (int) 8, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 9, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 8, 'cpa' => (int) 10, 'csa' => (int) 7, 'camsi' => (int) 20, 'dca' => (int) 8, 'din' => (int) 12, 'dzi' => (int) 14, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 6, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 38, 'gra' => (int) 16, 'vvi' => (int) 8, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 5, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 11, 'lja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 11, 'mpo' => (int) 3, 'mbi' => (int) 14, 'mdo' => (int) 14, 'mtr' => (int) 8, 'cme' => (int) 9, 'egut' => (int) 9, 'ama' => (int) 11, 'nta' => (int) 17, 'nnu' => (int) 11, 'oeu' => (int) 18, 'osa' => (int) 8, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 6, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 9, 'rsi' => (int) 9, 'sbr' => (int) 10, 'sbo' => (int) 8, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 10, 'sas' => (int) 10, 'shi' => (int) 6, 'smo' => (int) 7, 'sly' => (int) 14, 'spe' => (int) 10, 'spa' => (int) 8, 'tar' => (int) 19, 'tha' => (int) 10, 'tca' => (int) 8, 'esa' => (int) 8, 'tpr' => (int) 11, 'twi' => (int) 13, 'ugi' => (int) 9, 'vma' => (int) 8, 'vmu' => (int) 10, 'zma' => (int) 15 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb353780' $species_info = array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ) $local_species = 'vma' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000499', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1066', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p29780' => 'bna', 'A02p33180' => 'bna', 'A03p16470' => 'bna', 'A03p66010' => 'bna', 'A04p25970' => 'bna', 'A06p01270' => 'bna', 'A06p46080' => 'bna', 'A07p11400' => 'bna', 'A08p01840' => 'bna', 'A08p08230' => 'bna', 'A08p25740' => 'bna', 'A09p32070' => 'bna', 'A09p37830' => 'bna', 'A09p42840' => 'bna', 'A09p42850' => 'bna', 'Aa31LG10G2060' => 'aar', 'Aa31LG2G7410' => 'aar', 'Aa31LG6G10200' => 'aar', 'Aa31LG6G16680' => 'aar', 'Aa31LG6G8470' => 'aar', 'Aa31LG9G12730' => 'aar', 'Aa31LG9G13680' => 'aar', 'Aa31LG9G14920' => 'aar', 'Aa31LG9G6650' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4977' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5467' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3254' => 'aag', 'Actinidia02578' => 'ach', 'Actinidia07693' => 'ach', 'Actinidia08413' => 'ach', 'Actinidia08414' => 'ach', 'Actinidia15289' => 'ach', 'Actinidia19871' => 'ach', 'Actinidia21475' => 'ach', 'Actinidia22576' => 'ach', 'Actinidia28327' => 'ach', 'Actinidia32491' => 'ach', 'Actinidia39463' => 'ach', 'Actinidia39571' => 'ach', 'Ah.01g013750' => 'amhyb', 'Ah.01g023210' => 'amhyb', 'Ah.04g164850' => 'amhyb', 'Ah.05g178060' => 'amhyb', 'Ah.07g204270' => 'amhyb', 'Ah.07g208480' => 'amhyb', 'Ah.09g237410' => 'amhyb', 'Ah.14g089460' => 'amhyb', 'AL1G41790' => 'aly', 'AL1G49050' => 'aly', 'AL1G53810' => 'aly', 'AL1G61400' => 'aly', 'AL4G18580' => 'aly', 'AL5G12510' => 'aly', 'AL5G12540' => 'aly', 'AL6G43230' => 'aly', 'AL7G10370' => 'aly', 'AL7G19250' => 'aly', 'AL8G12240' => 'aly', 'AL8G18540' => 'aly', 'Aqoxy1G02409' => 'aox', 'Aqoxy2G03993' => 'aox', 'Aqoxy3G03357' => 'aox', 'Aqoxy4G00785' => 'aox', 'Aqoxy5G02598' => 'aox', 'Aqoxy6G00132' => 'aox', 'Aqoxy7G01776' => 'aox', 'Aqoxy7G02316' => 'aox', 'Aqoxy7G03973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.12AFKW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B8730' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27IQR1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3F75VG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3RE0GA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41TCQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.527VTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FIR39' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5W8UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DA38EV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ63HS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H1I32C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HC27T5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4M8AP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7N3CZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9UVDZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LS1NQA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT1D4B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SKC4TM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCFV76' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF9Q1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQWD9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1ZM88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WE07RT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YCK7VH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJE6Q6' => 'arhy', 'AT1G28240' => 'ath', 'AT1G34550' => 'ath', 'AT1G53040' => 'ath', 'AT2G02910' => 'ath', 'AT4G09630' => 'ath', 'AT4G38500' => 'ath', 'AT5G42660' => 'ath', 'AT5G46220' => 'ath', 'ATR0152G026' => 'atr', 'ATR0564G343' => 'atr', 'ATR0706G151' => 'atr', 'ATR0733G207' => 'atr', 'ATR0751G234' => 'atr', 'ATR0807G048' => 'atr', 'ATR1091G084' => 'atr', 'Atru.chr10.1229' => 'acertr', 'Atru.chr10.1230' => 'acertr', 'Atru.chr10.1874' => 'acertr', 'Atru.chr11.1808' => 'acertr', 'Atru.chr13.1795' => 'acertr', 'Atru.chr13.570' => 'acertr', 'Atru.chr2.2608' => 'acertr', 'Atru.chr2.2609' => 'acertr', 'Atru.chr5.3428' => 'acertr', 'Atru.chr8.1171' => 'acertr', 'AUR62004651' => 'cqu', 'AUR62008675' => 'cqu', 'AUR62010014' => 'cqu', 'AUR62013004' => 'cqu', 'AUR62014825' => 'cqu', 'AUR62015015' => 'cqu', 'AUR62015151' => 'cqu', 'AUR62017020' => 'cqu', 'AUR62019422' => 'cqu', 'AUR62023570' => 'cqu', 'AUR62025571' => 'cqu', 'AUR62029098' => 'cqu', 'AUR62033863' => 'cqu', 'AUR62034296' => 'cqu', 'AUR62040075' => 'cqu', 'BcaB02g07334' => 'bca', 'BcaB02g10575' => 'bca', 'BcaB03g12119' => 'bca', 'BcaB03g12120' => 'bca', 'BcaB03g13945' => 'bca', 'BcaB04g17123' => 'bca', 'BcaB04g17867' => 'bca', 'BcaB04g19839' => 'bca', 'BcaB07g30317' => 'bca', 'BcaB07g32432' => 'bca', 'BcaB07g33362' => 'bca', 'BcaB08g36611' => 'bca', 'BcaC01g00028' => 'bca', 'BcaC01g01356' => 'bca', 'BcaC01g02034' => 'bca', 'BcaC01g06051' => 'bca', 'BcaC03g16839' => 'bca', 'BcaC03g17176' => 'bca', 'BcaC05g26829' => 'bca', 'BcaC06g31490' => 'bca', 'BcaC06g35344' => 'bca', 'BcaC06g36570' => 'bca', 'BcaC07g37537' => 'bca', 'BcaC08g43491' => 'bca', 'BcaC08g43773' => 'bca', 'BcaNung00234' => 'bca', 'BcaNung01982' => 'bca', 'BcaNung03707' => 'bca', 'BcaNung06454' => 'bca', 'BolC2t10762H' => 'bol', 'BolC2t11191H' => 'bol', 'BolC3t14322H' => 'bol', 'BolC3t19747H' => 'bol', 'BolC3t21425H' => 'bol', 'BolC4t27800H' => 'bol', 'BolC5t31423H' => 'bol', 'BolC6t35951H' => 'bol', 'BolC6t36282H' => 'bol', 'BolC7t40678H' => 'bol', 'BolC7t40679H' => 'bol', 'BolC7t42222H' => 'bol', 'BolC7t43492H' => 'bol', 'BolC7t46785H' => 'bol', 'BolC8t47853H' => 'bol', 'BolC9t56805H' => 'bol', 'BraA02t08000Z' => 'bra', 'BraA02t08341Z' => 'bra', 'BraA03t10936Z' => 'bra', 'BraA03t15657Z' => 'bra', 'BraA04t18100Z' => 'bra', 'BraA05t20523Z' => 'bra', 'BraA06t23353Z' => 'bra', 'BraA06t27473Z' => 'bra', 'BraA06t27769Z' => 'bra', 'BraA07t28928Z' => 'bra', 'BraA08t32236Z' => 'bra', 'BraA08t32841Z' => 'bra', 'BraA08t34524Z' => 'bra', 'BraA09t38742Z' => 'bra', 'BraA09t39295Z' => 'bra', 'C02p47180' => 'bna', 'C02p50990' => 'bna', 'C03p19360' => 'bna', 'C03p74950' => 'bna', 'C03p91000' => 'bna', 'C04p63260' => 'bna', 'C05p27050' => 'bna', 'C06p08750' => 'bna', 'C06p11490' => 'bna', 'C07p02820' => 'bna', 'C07p17180' => 'bna', 'C07p29440' => 'bna', 'C07p63730' => 'bna', 'C09p39260' => 'bna', 'CAN.G1164.34' => 'can', 'CAN.G1164.39' => 'can', 'CAN.G1530.3' => 'can', 'CAN.G162.61' => 'can', 'CAN.G176.6' => 'can', 'CAN.G289.49' => 'can', 'CAN.G370.21' => 'can', 'CAN.G370.22' => 'can', 'CAN.G371.117' => 'can', 'CAN.G58.37' => 'can', 'CAN.G588.98' => 'can', 'CANSAT21G2266' => 'cansat', 'CANSAT25G2799' => 'cansat', 'CANSAT35G0862' => 'cansat', 'CANSAT35G1704' => 'cansat', 'CANSAT35G1760' => 'cansat', 'CANSAT56G3971' => 'cansat', 'CANSAT56G4116' => 'cansat', 'CANSAT80G1259' => 'cansat', 'CARHR027730' => 'chi', 'CARHR033880' => 'chi', 'CARHR043270' => 'chi', 'CARHR145330' => 'chi', 'CARHR145340' => 'chi', 'CARHR175570' => 'chi', 'CARHR181570' => 'chi', 'CARHR258470' => 'chi', 'CARHR260490' => 'chi', 'CARHR294220' => 'chi', 'Carub.0001s2668' => 'cru', 'Carub.0001s3257' => 'cru', 'Carub.0001s4220' => 'cru', 'Carub.0005s0179' => 'cru', 'Carub.0006s2807' => 'cru', 'Carub.0007s0039' => 'cru', 'Carub.0008s0169' => 'cru', 'Carub.0008s0636' => 'cru', 'Ca_00338_v3' => 'car', 'Ca_00542_v3' => 'car', 'Ca_01844_v3' => 'car', 'Ca_10611_v3' => 'car', 'Ca_13326_v3' => 'car', 'Ca_17944_v3' => 'car', 'Ca_18546_v3' => 'car', 'Ca_24219_v3' => 'car', 'Ca_29972_v3' => 'car', 'CBR_g3681' => 'cbr', 'CBR_g40021' => 'cbr', 'Cc01_g08140' => 'ccan', 'Cc02_g13410' => 'ccan', 'Cc02_g37480' => 'ccan', 'Cc05_g12030' => 'ccan', 'Cc09_g03370' => 'ccan', 'Cc09_g10300' => 'ccan', 'Cc10_g03530' => 'ccan', 'Cc10_g11380' => 'ccan', 'CDE01G0176' => 'cde', 'CDE02G0675' => 'cde', 'CDE02G0942' => 'cde', 'CDE02G1153' => 'cde', 'CDE02G4177' => 'cde', 'CDE04G2117' => 'cde', 'CDE04G2736' => 'cde', 'CDE08G1161' => 'cde', 'CDE09G1238' => 'cde', 'Cfa000467' => 'cfa', 'Cfa000947' => 'cfa', 'Cfa004969' => 'cfa', 'Cfa005284' => 'cfa', 'Cfa008993' => 'cfa', 'Cfa018187' => 'cfa', 'Cfa018454' => 'cfa', 'Cfa020585' => 'cfa', 'Ciclev10000424m.g' => 'ccl', 'Ciclev10003605m.g' => 'ccl', 'Ciclev10007828m.g' => 'ccl', 'Ciclev10014620m.g' => 'ccl', 'Ciclev10015169m.g' => 'ccl', 'Ciclev10018291m.g' => 'ccl', 'Ciclev10028256m.g' => 'ccl', 'Ciclev10033822m.g' => 'ccl', 'CiPaw.05G060300' => 'cil', 'CiPaw.05G085000' => 'cil', 'CiPaw.06G083700' => 'cil', 'CiPaw.06G120300' => 'cil', 'CiPaw.09G060500' => 'cil', 'CiPaw.09G123800' => 'cil', 'CiPaw.11G169700' => 'cil', 'CiPaw.12G118300' => 'cil', 'CiPaw.15G071000' => 'cil', 'CiPaw.15G081900' => 'cil', 'ClCG01G024610' => 'cla', 'ClCG03G006070' => 'cla', 'ClCG05G019250' => 'cla', 'ClCG09G009500' => 'cla', 'ClCG11G008200' => 'cla', 'ClCG11G018080' => 'cla', 'COL.COLO4_17373' => 'col', 'COL.COLO4_22994' => 'col', 'COL.COLO4_26389' => 'col', 'COL.COLO4_27170' => 'col', 'COL.COLO4_31074' => 'col', 'COL.COLO4_31465' => 'col', 'COL.COLO4_36438' => 'col', 'COL.COLO4_36439' => 'col', 'Cpa.g.c38781' => 'cpa', 'Cpa.g.sc128.12' => 'cpa', 'Cpa.g.sc166.7' => 'cpa', 'Cpa.g.sc166.8' => 'cpa', 'Cpa.g.sc20.111' => 'cpa', 'Cpa.g.sc27.31' => 'cpa', 'Cpa.g.sc64.36' => 'cpa', 'Cpa.g.sc64.37' => 'cpa', 'Cpa.g.sc66.49' => 'cpa', 'Cpa.g.sc80.64' => 'cpa', 'CsaV3_1G012320' => 'csa', 'CsaV3_2G008480' => 'csa', 'CsaV3_2G033450' => 'csa', 'CsaV3_3G044830' => 'csa', 'CsaV3_4G033710' => 'csa', 'CsaV3_6G051730' => 'csa', 'CsaV3_7G025350' => 'csa', 'CSS0001067' => 'camsi', 'CSS0005996' => 'camsi', 'CSS0006590' => 'camsi', 'CSS0009673' => 'camsi', 'CSS0010201' => 'camsi', 'CSS0010549' => 'camsi', 'CSS0011364' => 'camsi', 'CSS0014473' => 'camsi', 'CSS0014961' => 'camsi', 'CSS0020191' => 'camsi', 'CSS0021165' => 'camsi', 'CSS0022306' => 'camsi', 'CSS0030591' => 'camsi', 'CSS0030696' => 'camsi', 'CSS0032653' => 'camsi', 'CSS0037487' => 'camsi', 'CSS0041102' => 'camsi', 'CSS0041261' => 'camsi', 'CSS0046246' => 'camsi', 'CSS0049256' => 'camsi', 'DCAR_004075' => 'dca', 'DCAR_011538' => 'dca', 'DCAR_019553' => 'dca', 'DCAR_020952' => 'dca', 'DCAR_021739' => 'dca', 'DCAR_027407' => 'dca', 'DCAR_027913' => 'dca', 'DCAR_028066' => 'dca', 'Dinv05899' => 'din', 'Dinv07563' => 'din', 'Dinv08010' => 'din', 'Dinv14125' => 'din', 'Dinv20172' => 'din', 'Dinv30743' => 'din', 'Dinv31229' => 'din', 'Dinv34162' => 'din', 'Dinv36028' => 'din', 'Dinv39368' => 'din', 'Dinv40565' => 'din', 'Dinv41706' => 'din', 'Duzib052G0089' => 'dzi', 'Duzib116G0641' => 'dzi', 'Duzib132G0069' => 'dzi', 'Duzib132G1219' => 'dzi', 'Duzib147G0278' => 'dzi', 'Duzib160G0480' => 'dzi', 'Duzib170G0661' => 'dzi', 'Duzib177G0591' => 'dzi', 'Duzib187G1353' => 'dzi', 'Duzib192G0858' => 'dzi', 'Duzib192G0883' => 'dzi', 'Duzib213G0506' => 'dzi', 'Duzib235G0289' => 'dzi', 'Duzib251G0422' => 'dzi', 'ECA232G3898' => 'eca', 'ECA233G5950' => 'eca', 'ECA234G1699' => 'eca', 'ECA234G2421' => 'eca', 'ECA236G0426' => 'eca', 'ECA236G4331' => 'eca', 'ECA248G2573' => 'eca', 'EL10Ac1g00077' => 'bvu', 'EL10Ac1g01746' => 'bvu', 'EL10Ac2g03464' => 'bvu', 'EL10Ac4g08176' => 'bvu', 'EL10Ac7g17521' => 'bvu', 'EL10Ac8g20386' => 'bvu', 'EL10Ac9g21343' => 'bvu', 'EL10Ac9g22688' => 'bvu', 'Eucgr.B03434' => 'egr', 'Eucgr.D00618' => 'egr', 'Eucgr.E02395' => 'egr', 'Eucgr.F01129' => 'egr', 'Eucgr.F02622' => 'egr', 'Eucgr.F04207' => 'egr', 'FAN01G0570' => 'fan', 'FAN03G3351' => 'fan', 'FAN06G3702' => 'fan', 'FAN07G2149' => 'fan', 'FAN10G3758' => 'fan', 'FAN11G1170' => 'fan', 'FAN11G2050' => 'fan', 'FAN11G2724' => 'fan', 'FAN12G1700' => 'fan', 'FAN12G2028' => 'fan', 'FAN15G1160' => 'fan', 'FAN15G3063' => 'fan', 'FAN16G2540' => 'fan', 'FAN16G3077' => 'fan', 'FAN16G3624' => 'fan', 'FAN17G0221' => 'fan', 'FAN20G2492' => 'fan', 'FAN20G2905' => 'fan', 'FAN21G0548' => 'fan', 'FAN21G1300' => 'fan', 'FAN22G0077' => 'fan', 'FAN22G1315' => 'fan', 'FAN24G1280' => 'fan', 'FAN24G1445' => 'fan', 'FAN24G3527' => 'fan', 'FAN25G0464' => 'fan', 'FAN25G2885' => 'fan', 'FAN25G3270' => 'fan', 'FAN27G1101' => 'fan', 'FAN27G2846' => 'fan', 'FAN27G3524' => 'fan', 'FvH4_2g11770' => 'fve', 'FvH4_2g15630' => 'fve', 'FvH4_3g05570' => 'fve', 'FvH4_3g09110' => 'fve', 'FvH4_3g19940' => 'fve', 'FvH4_4g04821' => 'fve', 'FvH4_4g31480' => 'fve', 'FvH4_7g01740' => 'fve', 'Glyma.05G130400' => 'gma', 'Glyma.05G156400' => 'gma', 'Glyma.07G197000' => 'gma', 'Glyma.08G085151' => 'gma', 'Glyma.08G114500' => 'gma', 'Glyma.08G300400' => 'gma', 'Glyma.10G215800' => 'gma', 'Glyma.12G224400' => 'gma', 'Glyma.13G179300' => 'gma', 'Glyma.13G218151' => 'gma', 'Glyma.13G238800' => 'gma', 'Glyma.13G276900' => 'gma', 'Glyma.14G078200' => 'gma', 'Glyma.15G074500' => 'gma', 'Glyma.15G094100' => 'gma', 'Glyma.17G247200' => 'gma', 'Glyma.18G120100' => 'gma', 'Glyma.20G176000' => 'gma', 'Gohir.A01G063600' => 'ghi', 'Gohir.A01G170301' => 'ghi', 'Gohir.A02G060500' => 'ghi', 'Gohir.A05G133850' => 'ghi', 'Gohir.A05G161400' => 'ghi', 'Gohir.A06G012900' => 'ghi', 'Gohir.A06G035901' => 'ghi', 'Gohir.A06G127100' => 'ghi', 'Gohir.A06G210500' => 'ghi', 'Gohir.A08G008650' => 'ghi', 'Gohir.A09G072700' => 'ghi', 'Gohir.A09G088301' => 'ghi', 'Gohir.A10G040600' => 'ghi', 'Gohir.A12G036300' => 'ghi', 'Gohir.A12G143350' => 'ghi', 'Gohir.A12G165500' => 'ghi', 'Gohir.A13G145700' => 'ghi', 'Gohir.D01G050000' => 'ghi', 'Gohir.D01G051366' => 'ghi', 'Gohir.D01G161350' => 'ghi', 'Gohir.D02G065900' => 'ghi', 'Gohir.D05G164200' => 'ghi', 'Gohir.D05G355500' => 'ghi', 'Gohir.D06G010400' => 'ghi', 'Gohir.D06G111250' => 'ghi', 'Gohir.D06G132000' => 'ghi', 'Gohir.D06G210500' => 'ghi', 'Gohir.D07G165675' => 'ghi', 'Gohir.D08G062240' => 'ghi', 'Gohir.D08G086101' => 'ghi', 'Gohir.D08G138060' => 'ghi', 'Gohir.D09G072300' => 'ghi', 'Gohir.D10G041400' => 'ghi', 'Gohir.D11G191020' => 'ghi', 'Gohir.D11G212066' => 'ghi', 'Gohir.D12G036300' => 'ghi', 'Gohir.D12G168600' => 'ghi', 'Gohir.D13G150600' => 'ghi', 'Gorai.001G057300' => 'gra', 'Gorai.002G069900' => 'gra', 'Gorai.002G200000' => 'gra', 'Gorai.003G067600' => 'gra', 'Gorai.005G074800' => 'gra', 'Gorai.006G087300' => 'gra', 'Gorai.008G037500' => 'gra', 'Gorai.008G181400' => 'gra', 'Gorai.009G169400' => 'gra', 'Gorai.009G387900' => 'gra', 'Gorai.010G013300' => 'gra', 'Gorai.010G153800' => 'gra', 'Gorai.010G255800' => 'gra', 'Gorai.011G043700' => 'gra', 'Gorai.011G198900' => 'gra', 'Gorai.013G168400' => 'gra', 'GSVIVG01005212001' => 'vvi', 'GSVIVG01006163001' => 'vvi', 'GSVIVG01009625001' => 'vvi', 'GSVIVG01014338001' => 'vvi', 'GSVIVG01020005001' => 'vvi', 'GSVIVG01021450001' => 'vvi', 'GSVIVG01023975001' => 'vvi', 'GSVIVG01034490001' => 'vvi', 'HanXRQChr04g0112071' => 'han', 'HanXRQChr05g0131151' => 'han', 'HanXRQChr09g0262371' => 'han', 'HanXRQChr09g0268401' => 'han', 'HanXRQChr10g0279241' => 'han', 'HanXRQChr10g0297961' => 'han', 'HanXRQChr11g0326231' => 'han', 'HanXRQChr11g0328471' => 'han', 'HanXRQChr16g0507941' => 'han', 'HanXRQChr17g0560211' => 'han', 'Haze_02108' => 'cav', 'Haze_02428' => 'cav', 'Haze_05593' => 'cav', 'Haze_06448' => 'cav', 'Haze_09427' => 'cav', 'Haze_12022' => 'cav', 'Haze_17612' => 'cav', 'Haze_17928' => 'cav', 'Hma1.2p1_0032F.1_g019250' => 'hma', 'Hma1.2p1_0163F.1_g072690' => 'hma', 'Hma1.2p1_0265F.1_g106710' => 'hma', 'Hma1.2p1_0286F.1_g113970' => 'hma', 'Hma1.2p1_0363F.1_g136640' => 'hma', 'Hma1.2p1_0584F.1_g183470' => 'hma', 'Hma1.2p1_0885F.1_g232570' => 'hma', 'HPP92_006022' => 'vpl', 'HPP92_007320' => 'vpl', 'HPP92_011521' => 'vpl', 'HPP92_019387' => 'vpl', 'HPP92_024038' => 'vpl', 'Hund05891' => 'sun', 'Hund06450' => 'sun', 'Hund12053' => 'sun', 'Hund16800' => 'sun', 'Hund21222' => 'sun', 'Hund22896' => 'sun', 'Hund23746' => 'sun', 'Hund27083' => 'sun', 'Lalb_Chr02g0141831' => 'lal', 'Lalb_Chr02g0141841' => 'lal', 'Lalb_Chr05g0220411' => 'lal', 'Lalb_Chr06g0162081' => 'lal', 'Lalb_Chr09g0327651' => 'lal', 'Lalb_Chr13g0295051' => 'lal', 'Lalb_Chr15g0086801' => 'lal', 'Lalb_Chr16g0383781' => 'lal', 'Lalb_Chr16g0383791' => 'lal', 'Lalb_Chr18g0055441' => 'lal', 'Lalb_Chr18g0059611' => 'lal', 'Lalb_Chr20g0109661' => 'lal', 'Lalb_Chr20g0109831' => 'lal', 'Lalb_Chr20g0121871' => 'lal', 'Lalb_Chr22g0355361' => 'lal', 'Lalb_Chr25g0286371' => 'lal', 'Lj1A1187G43' => 'lonja', 'Lj1A1205T50' => 'lonja', 'Lj1A800G33' => 'lonja', 'Lj1C1187T7' => 'lonja', 'Lj1C843T11' => 'lonja', 'Lj1g0010940' => 'lja', 'Lj2A288T69' => 'lonja', 'Lj3g0024276' => 'lja', 'Lj4A47T76' => 'lonja', 'Lj4g0005805' => 'lja', 'Lj4g0006097' => 'lja', 'Lj4g0008528' => 'lja', 'Lj4g0024907' => 'lja', 'Lj5g0012472' => 'lja', 'Lj5g0018648' => 'lja', 'Lj6C789G1' => 'lonja', 'Lj6g0004000' => 'lja', 'Lj7A292G67' => 'lonja', 'Lj7A292T64' => 'lonja', 'Lj9A400T58' => 'lonja', 'Lsat_1_v5_gn_1_126181' => 'lsa', 'Lsat_1_v5_gn_4_123041' => 'lsa', 'Lsat_1_v5_gn_4_133620' => 'lsa', 'Lsat_1_v5_gn_4_53221' => 'lsa', 'Lsat_1_v5_gn_4_71961' => 'lsa', 'Lsat_1_v5_gn_7_105241' => 'lsa', 'Lsat_1_v5_gn_7_21361' => 'lsa', 'Lsat_1_v5_gn_7_28860' => 'lsa', 'Lsat_1_v5_gn_7_31260' => 'lsa', 'Lsat_1_v5_gn_8_52801' => 'lsa', 'Manes.02G191400' => 'mes', 'Manes.03G110100' => 'mes', 'Manes.04G071100' => 'mes', 'Manes.05G100500' => 'mes', 'Manes.05G164700' => 'mes', 'Manes.15G087000' => 'mes', 'Manes.15G121500' => 'mes', 'Manes.16G028300' => 'mes', 'Manes.17G046100' => 'mes', 'Manes.17G069800' => 'mes', 'Manes.18G100500' => 'mes', 'Mapoly0002s0109' => 'mpo', 'Mapoly0024s0007' => 'mpo', 'Mapoly0089s0032' => 'mpo', 'MBI04_g42241_MAGBIO' => 'mbi', 'MBI05_g11988_MAGBIO' => 'mbi', 'MBI05_g35452_MAGBIO' => 'mbi', 'MBI07_g30179_MAGBIO' => 'mbi', 'MBI07_g35859_MAGBIO' => 'mbi', 'MBI07_g35860_MAGBIO' => 'mbi', 'MBI07_g37166_MAGBIO' => 'mbi', 'MBI08_g18172_MAGBIO' => 'mbi', 'MBI09_g08441_MAGBIO' => 'mbi', 'MBI13_g01676_MAGBIO' => 'mbi', 'MBI14_g42955_MAGBIO' => 'mbi', 'MBI16_g13161_MAGBIO' => 'mbi', 'MBI17_g27204_MAGBIO' => 'mbi', 'MBI19_g21595_MAGBIO' => 'mbi', 'MD00G1148400' => 'mdo', 'MD02G1301200' => 'mdo', 'MD03G1227800' => 'mdo', 'MD05G1041100' => 'mdo', 'MD05G1124800' => 'mdo', 'MD05G1284000' => 'mdo', 'MD05G1338800' => 'mdo', 'MD05G1338900' => 'mdo', 'MD07G1022800' => 'mdo', 'MD10G1047500' => 'mdo', 'MD10G1127500' => 'mdo', 'MD10G1262300' => 'mdo', 'MD10G1293800' => 'mdo', 'MD16G1074300' => 'mdo', 'Medtr1g021670' => 'mtr', 'Medtr1g096320' => 'mtr', 'Medtr2g013690' => 'mtr', 'Medtr2g019450' => 'mtr', 'Medtr2g085170' => 'mtr', 'Medtr4g088785' => 'mtr', 'Medtr8g055930' => 'mtr', 'Medtr8g085850' => 'mtr', 'MELO3C002605.2' => 'cme', 'MELO3C003891.2' => 'cme', 'MELO3C004012.2' => 'cme', 'MELO3C007134.2' => 'cme', 'MELO3C008118.2' => 'cme', 'MELO3C016700.2' => 'cme', 'MELO3C024127.2' => 'cme', 'MELO3C033361.2' => 'cme', 'MELO3C033362.2' => 'cme', 'Migut.C00430' => 'egut', 'Migut.C01246' => 'egut', 'Migut.E00101' => 'egut', 'Migut.H01486' => 'egut', 'Migut.H01939' => 'egut', 'Migut.K00360' => 'egut', 'Migut.M00910' => 'egut', 'Migut.M01139' => 'egut', 'Migut.N02677' => 'egut', 'MSTRG.13252' => 'ama', 'MSTRG.14701' => 'ama', 'MSTRG.1521' => 'ama', 'MSTRG.15884' => 'ama', 'MSTRG.16242' => 'ama', 'MSTRG.22285' => 'ama', 'MSTRG.22444' => 'ama', 'MSTRG.2349' => 'ama', 'MSTRG.26308' => 'ama', 'MSTRG.28296' => 'ama', 'MSTRG.9895' => 'ama', 'Nitab4.5_0000110g0060' => 'nta', 'Nitab4.5_0000420g0130' => 'nta', 'Nitab4.5_0000422g0030' => 'nta', 'Nitab4.5_0000560g0180' => 'nta', 'Nitab4.5_0000703g0100' => 'nta', 'Nitab4.5_0000786g0200' => 'nta', 'Nitab4.5_0001336g0020' => 'nta', 'Nitab4.5_0001796g0030' => 'nta', 'Nitab4.5_0003348g0060' => 'nta', 'Nitab4.5_0003698g0040' => 'nta', 'Nitab4.5_0003942g0090' => 'nta', 'Nitab4.5_0004775g0070' => 'nta', 'Nitab4.5_0004864g0030' => 'nta', 'Nitab4.5_0005615g0020' => 'nta', 'Nitab4.5_0009288g0030' => 'nta', 'Nitab4.5_0009341g0010' => 'nta', 'Nitab4.5_0009535g0010' => 'nta', 'Nn1g03995' => 'nnu', 'Nn1g04100' => 'nnu', 'Nn1g06530' => 'nnu', 'Nn3g16404' => 'nnu', 'Nn3g17212' => 'nnu', 'Nn3g20776' => 'nnu', 'Nn3g21923' => 'nnu', 'Nn5g27737' => 'nnu', 'Nn5g29461' => 'nnu', 'Nn7g38355' => 'nnu', 'Nn8g39873' => 'nnu', 'Oeu000548.2' => 'oeu', 'Oeu004672.1' => 'oeu', 'Oeu015605.2' => 'oeu', 'Oeu016092.1' => 'oeu', 'Oeu017879.3' => 'oeu', 'Oeu024910.1' => 'oeu', 'Oeu028965.1' => 'oeu', 'Oeu031269.1' => 'oeu', 'Oeu031270.1' => 'oeu', 'Oeu032535.1' => 'oeu', 'Oeu034151.1' => 'oeu', 'Oeu034152.1' => 'oeu', 'Oeu034588.2' => 'oeu', 'Oeu050846.1' => 'oeu', 'Oeu050849.2' => 'oeu', 'Oeu051063.2' => 'oeu', 'Oeu052368.1' => 'oeu', 'Oeu052370.1' => 'oeu', 'Os01g0210400' => 'osa', 'Os01g0304300' => 'osa', 'Os01g0749100' => 'osa', 'Os02g0745800' => 'osa', 'Os03g0769050' => 'osa', 'Os05g0531500' => 'osa', 'Os06g0724300' => 'osa', 'Os11g0198100' => 'osa', 'Peaxi162Scf00069g01425' => 'pax', 'Peaxi162Scf00280g00811' => 'pax', 'Peaxi162Scf00310g00615' => 'pax', 'Peaxi162Scf00362g00542' => 'pax', 'Peaxi162Scf00461g00310' => 'pax', 'Peaxi162Scf00530g00118' => 'pax', 'Peaxi162Scf00541g00057' => 'pax', 'Peaxi162Scf00661g00017' => 'pax', 'Peaxi162Scf00926g00027' => 'pax', 'Peaxi162Scf01064g00263' => 'pax', 'Peaxi162Scf01211g00135' => 'pax', 'PGR004G2336' => 'pgr', 'PGR042G0327' => 'pgr', 'PGR042G1957' => 'pgr', 'PGR042G2003' => 'pgr', 'PGR042G3929' => 'pgr', 'PGR083G1137' => 'pgr', 'PGR083G1364' => 'pgr', 'PGSC0003DMG400003381' => 'stu', 'PGSC0003DMG400003417' => 'stu', 'PGSC0003DMG400008981' => 'stu', 'PGSC0003DMG400012417' => 'stu', 'PGSC0003DMG400012823' => 'stu', 'PGSC0003DMG400016885' => 'stu', 'PGSC0003DMG400022812' => 'stu', 'PGSC0003DMG400029726' => 'stu', 'PGSC0003DMG401009243' => 'stu', 'PGSC0003DMG401031505' => 'stu', 'PGSC0003DMG402031505' => 'stu', 'Phvul.001G017600' => 'pvu', 'Phvul.002G193500' => 'pvu', 'Phvul.002G228900' => 'pvu', 'Phvul.002G236800' => 'pvu', 'Phvul.003G049500' => 'pvu', 'Phvul.005G072000' => 'pvu', 'Phvul.006G164800' => 'pvu', 'Phvul.006G185100' => 'pvu', 'Phvul.007G090000' => 'pvu', 'Potri.001G399800' => 'ptr', 'Potri.002G149900' => 'ptr', 'Potri.004G044100' => 'ptr', 'Potri.004G177600' => 'ptr', 'Potri.009G138000' => 'ptr', 'Potri.010G094000' => 'ptr', 'Potri.011G053000' => 'ptr', 'Potri.011G119300' => 'ptr', 'Potri.013G113700' => 'ptr', 'Potri.018G107800' => 'ptr', 'Potri.019G084100' => 'ptr', 'Pp3c14_23720' => 'ppa', 'Pp3c16_6340' => 'ppa', 'Pp3c23_13420' => 'ppa', 'Pp3c24_2740' => 'ppa', 'Pp3c25_860' => 'ppa', 'Pp3c8_21750' => 'ppa', 'Prupe.1G273000' => 'ppe', 'Prupe.1G273700' => 'ppe', 'Prupe.1G274100' => 'ppe', 'Prupe.2G023300' => 'ppe', 'Prupe.4G048000' => 'ppe', 'Prupe.4G080400' => 'ppe', 'Prupe.4G181200' => 'ppe', 'Prupe.8G056900' => 'ppe', 'Prupe.8G168700' => 'ppe', 'Psat1g189080' => 'psa', 'Psat1g204760' => 'psa', 'Psat4g175560' => 'psa', 'Psat4g177720' => 'psa', 'Psat5g244240' => 'psa', 'Psat6g010720' => 'psa', 'Psat6g187200' => 'psa', 'Psat7g072040' => 'psa', 'PSO017G3501' => 'pso', 'PSO063G2148' => 'pso', 'PSO063G5608' => 'pso', 'PSO210G6392' => 'pso', 'PSO541G2319' => 'pso', 'PSO541G2836' => 'pso', 'PSO541G4012' => 'pso', 'PSO541G6253' => 'pso', 'PSO675G0580' => 'pso', 'PSO675G0856' => 'pso', 'PSO675G5635' => 'pso', 'PSO675G9157' => 'pso', 'PSO832G1660' => 'pso', 'PSO832G1969' => 'pso', 'QL02p007186' => 'qlo', 'QL02p033904' => 'qlo', 'QL03p064391' => 'qlo', 'QL05p040593' => 'qlo', 'QL05p058242' => 'qlo', 'QL08p021825' => 'qlo', 'QL11p004981' => 'qlo', 'RcHm_v2.0_Chr1g0318301' => 'rch', 'RcHm_v2.0_Chr4g0418501' => 'rch', 'RcHm_v2.0_Chr4g0439971' => 'rch', 'RcHm_v2.0_Chr5g0008541' => 'rch', 'RcHm_v2.0_Chr5g0014101' => 'rch', 'RcHm_v2.0_Chr5g0014131' => 'rch', 'RcHm_v2.0_Chr5g0033621' => 'rch', 'RcHm_v2.0_Chr6g0272041' => 'rch', 'RcHm_v2.0_Chr6g0278831' => 'rch', 'Rhsim02G0130400' => 'rsi', 'Rhsim02G0171100' => 'rsi', 'Rhsim05G0053000' => 'rsi', 'Rhsim05G0053100' => 'rsi', 'Rhsim06G0096500' => 'rsi', 'Rhsim06G0096600' => 'rsi', 'Rhsim06G0199100' => 'rsi', 'Rhsim12G0062300' => 'rsi', 'Rhsim12G0062800' => 'rsi', 'Sabra02G0118600' => 'sbr', 'Sabra04G0027300' => 'sbr', 'Sabra04G0119500' => 'sbr', 'Sabra08G0112500' => 'sbr', 'Sabra11G0036800' => 'sbr', 'Sabra11G0103800' => 'sbr', 'Sabra13G0096300' => 'sbr', 'Sabra16G0262300' => 'sbr', 'Sabra18G0091700' => 'sbr', 'Sabra19G0095400' => 'sbr', 'SalBow6G3080' => 'sbo', 'SalBow7G1157' => 'sbo', 'SalBow7G2123' => 'sbo', 'SalBow7G2285' => 'sbo', 'SalBow7G3537' => 'sbo', 'SalBow8G2947' => 'sbo', 'SalBow8G4463' => 'sbo', 'SalBow8G5466' => 'sbo', 'Sc01g0001750' => 'sci', 'Sc02g0006640' => 'sci', 'Sc02g0006670' => 'sci', 'Sc04g0008220' => 'sci', 'Sc05g0006190' => 'sci', 'Sc08g0002760' => 'sci', 'Sc17g0006170' => 'sci', 'Sc22g0002050' => 'sci', 'Sc23g0001190' => 'sci', 'Sc24g0000980' => 'sci', 'Sed0006245' => 'sed', 'Sed0007543' => 'sed', 'Sed0009411' => 'sed', 'Sed0010765' => 'sed', 'Sed0012944' => 'sed', 'Sed0014682' => 'sed', 'Sed0016174' => 'sed', 'Sed0016796' => 'sed', 'Sed0020317' => 'sed', 'Sed0021467' => 'sed', 'SEGI_01316' => 'sgi', 'SEGI_03374' => 'sgi', 'SEGI_16265' => 'sgi', 'SEGI_18569' => 'sgi', 'SEGI_20351' => 'sgi', 'SEGI_26395' => 'sgi', 'SEGI_29469' => 'sgi', 'SEGI_34771' => 'sgi', 'SEGI_36769' => 'sgi', 'SEGI_37139' => 'sgi', 'SGA_v2.0_scaffold100G29687' => 'sas', 'SGA_v2.0_scaffold118G32472' => 'sas', 'SGA_v2.0_scaffold14G07051' => 'sas', 'SGA_v2.0_scaffold183G39845' => 'sas', 'SGA_v2.0_scaffold1G00174' => 'sas', 'SGA_v2.0_scaffold22G09714' => 'sas', 'SGA_v2.0_scaffold333G48992' => 'sas', 'SGA_v2.0_scaffold46G17491' => 'sas', 'SGA_v2.0_scaffold49G18294' => 'sas', 'SGA_v2.0_scaffold63G21658' => 'sas', 'SHI01741' => 'shi', 'SHI05771' => 'shi', 'SHI18077' => 'shi', 'SHI20525' => 'shi', 'SHI20527' => 'shi', 'SHI20528' => 'shi', 'SMO172G0185' => 'smo', 'SMO198G0020' => 'smo', 'SMO351G0006' => 'smo', 'SMO356G0118' => 'smo', 'SMO358G0296' => 'smo', 'SMO367G0079' => 'smo', 'SMO367G1277' => 'smo', 'Solyc01g014220.3' => 'sly', 'Solyc01g111770.2' => 'sly', 'Solyc02g078180.3' => 'sly', 'Solyc03g006430.3' => 'sly', 'Solyc03g006456.1' => 'sly', 'Solyc03g079860.2' => 'sly', 'Solyc04g079770.3' => 'sly', 'Solyc05g007430.4' => 'sly', 'Solyc07g063150.3' => 'sly', 'Solyc08g016620.3' => 'sly', 'Solyc09g057590.3' => 'sly', 'Solyc09g057600.1' => 'sly', 'Solyc10g009050.3' => 'sly', 'Solyc11g017420.2' => 'sly', 'Sopen01g053810' => 'spe', 'Sopen02g023040' => 'spe', 'Sopen03g002440' => 'spe', 'Sopen04g033350' => 'spe', 'Sopen05g003310' => 'spe', 'Sopen07g004050' => 'spe', 'Sopen07g031340' => 'spe', 'Sopen08g006990' => 'spe', 'Sopen10g004830' => 'spe', 'Sopen11g009370' => 'spe', 'Sp1g24450' => 'spa', 'Sp1g29670' => 'spa', 'Sp1g39600' => 'spa', 'Sp2g11080' => 'spa', 'Sp2g13970' => 'spa', 'Sp4g16130' => 'spa', 'Sp6g13080' => 'spa', 'Sp7g37270' => 'spa', 'TAR371G0065' => 'tar', 'TAR376G0340' => 'tar', 'TAR376G0435' => 'tar', 'TAR381G0002' => 'tar', 'TAR381G1236' => 'tar', 'TAR624G0055' => 'tar', 'TAR624G0324' => 'tar', 'TAR624G0696' => 'tar', 'TAR624G0906' => 'tar', 'TAR625G0107' => 'tar', 'TAR626G0015' => 'tar', 'TAR626G1356' => 'tar', 'TAR627G0888' => 'tar', 'TAR628G0399' => 'tar', 'TAR628G1327' => 'tar', 'TAR629G2831' => 'tar', 'TAR629G2874' => 'tar', 'TAR633G1432' => 'tar', 'TAR633G2771' => 'tar', 'THA.LOC104803394' => 'tha', 'THA.LOC104805153' => 'tha', 'THA.LOC104806784' => 'tha', 'THA.LOC104810473' => 'tha', 'THA.LOC104813100' => 'tha', 'THA.LOC104814215' => 'tha', 'THA.LOC104815554' => 'tha', 'THA.LOC104820544' => 'tha', 'THA.LOC104824754' => 'tha', 'THA.LOC104827717' => 'tha', 'Thecc.02G031400' => 'tca', 'Thecc.02G055900' => 'tca', 'Thecc.02G350800' => 'tca', 'Thecc.06G150900' => 'tca', 'Thecc.06G186600' => 'tca', 'Thecc.07G089600' => 'tca', 'Thecc.08G020400' => 'tca', 'Thecc.08G182100' => 'tca', 'Thhalv10000873m.g' => 'esa', 'Thhalv10004185m.g' => 'esa', 'Thhalv10006981m.g' => 'esa', 'Thhalv10007204m.g' => 'esa', 'Thhalv10011374m.g' => 'esa', 'Thhalv10013482m.g' => 'esa', 'Thhalv10017801m.g' => 'esa', 'Thhalv10024983m.g' => 'esa', 'TPR.G12072' => 'tpr', 'TPR.G15769' => 'tpr', 'TPR.G16504' => 'tpr', 'TPR.G16506' => 'tpr', 'TPR.G24345' => 'tpr', 'TPR.G26666' => 'tpr', 'TPR.G27320' => 'tpr', 'TPR.G31819' => 'tpr', 'TPR.G38879' => 'tpr', 'TPR.G39015' => 'tpr', 'TPR.G8819' => 'tpr', 'TWI09G0924' => 'twi', 'TWI12G0811' => 'twi', 'TWI12G1294' => 'twi', 'TWI31G0150' => 'twi', 'TWI36G1262' => 'twi', 'TWI38G1287' => 'twi', 'TWI38G1633' => 'twi', 'TWI38G1982' => 'twi', 'TWI39G0116' => 'twi', 'TWI60G1011' => 'twi', 'TWI63G0171' => 'twi', 'TWI73G0839' => 'twi', 'TWI79G1511' => 'twi', 'unitig_0.g915' => 'ugi', 'unitig_0.g916' => 'ugi', 'unitig_21.g20219' => 'ugi', 'unitig_21.g20416' => 'ugi', 'unitig_578.g16132' => 'ugi', 'unitig_578.g16718' => 'ugi', 'unitig_62.g23481' => 'ugi', 'unitig_744.g24535' => 'ugi', 'unitig_749.g13525' => 'ugi', 'vmacro01248' => 'vma', 'vmacro02290' => 'vma', 'vmacro10946' => 'vma', 'vmacro11865' => 'vma', 'vmacro12493' => 'vma', 'vmacro17322' => 'vma', 'vmacro21599' => 'vma', 'vmacro23041' => 'vma', 'VMungo0251G0004' => 'vmu', 'VMungo0251G2639' => 'vmu', 'VMungo0251G2967' => 'vmu', 'VMungo0540G0864' => 'vmu', 'VMungo0540G1569' => 'vmu', 'VMungo0647G0317' => 'vmu', 'VMungo0720G1373' => 'vmu', 'VMungo0720G1508' => 'vmu', 'VMungo1080G0485' => 'vmu', 'VMungo1215G3177' => 'vmu', 'Zm00001eb112600' => 'zma', 'Zm00001eb120220' => 'zma', 'Zm00001eb153240' => 'zma', 'Zm00001eb168880' => 'zma', 'Zm00001eb213920' => 'zma', 'Zm00001eb228280' => 'zma', 'Zm00001eb254580' => 'zma', 'Zm00001eb272180' => 'zma', 'Zm00001eb293190' => 'zma', 'Zm00001eb322930' => 'zma', 'Zm00001eb353360' => 'zma', 'Zm00001eb353390' => 'zma', 'Zm00001eb353430' => 'zma', 'Zm00001eb353440' => 'zma', 'Zm00001eb353780' => 'zma' ), 'gf_id' => 'HOM05D000499', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000499' ), 'data_identifier' => 'HOM05D000499', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000499', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1066', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p29780' => 'bna', 'A02p33180' => 'bna', 'A03p16470' => 'bna', 'A03p66010' => 'bna', 'A04p25970' => 'bna', 'A06p01270' => 'bna', 'A06p46080' => 'bna', 'A07p11400' => 'bna', 'A08p01840' => 'bna', 'A08p08230' => 'bna', 'A08p25740' => 'bna', 'A09p32070' => 'bna', 'A09p37830' => 'bna', 'A09p42840' => 'bna', 'A09p42850' => 'bna', 'Aa31LG10G2060' => 'aar', 'Aa31LG2G7410' => 'aar', 'Aa31LG6G10200' => 'aar', 'Aa31LG6G16680' => 'aar', 'Aa31LG6G8470' => 'aar', 'Aa31LG9G12730' => 'aar', 'Aa31LG9G13680' => 'aar', 'Aa31LG9G14920' => 'aar', 'Aa31LG9G6650' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4977' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5467' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3254' => 'aag', 'Actinidia02578' => 'ach', 'Actinidia07693' => 'ach', 'Actinidia08413' => 'ach', 'Actinidia08414' => 'ach', 'Actinidia15289' => 'ach', 'Actinidia19871' => 'ach', 'Actinidia21475' => 'ach', 'Actinidia22576' => 'ach', 'Actinidia28327' => 'ach', 'Actinidia32491' => 'ach', 'Actinidia39463' => 'ach', 'Actinidia39571' => 'ach', 'Ah.01g013750' => 'amhyb', 'Ah.01g023210' => 'amhyb', 'Ah.04g164850' => 'amhyb', 'Ah.05g178060' => 'amhyb', 'Ah.07g204270' => 'amhyb', 'Ah.07g208480' => 'amhyb', 'Ah.09g237410' => 'amhyb', 'Ah.14g089460' => 'amhyb', 'AL1G41790' => 'aly', 'AL1G49050' => 'aly', 'AL1G53810' => 'aly', 'AL1G61400' => 'aly', 'AL4G18580' => 'aly', 'AL5G12510' => 'aly', 'AL5G12540' => 'aly', 'AL6G43230' => 'aly', 'AL7G10370' => 'aly', 'AL7G19250' => 'aly', 'AL8G12240' => 'aly', 'AL8G18540' => 'aly', 'Aqoxy1G02409' => 'aox', 'Aqoxy2G03993' => 'aox', 'Aqoxy3G03357' => 'aox', 'Aqoxy4G00785' => 'aox', 'Aqoxy5G02598' => 'aox', 'Aqoxy6G00132' => 'aox', 'Aqoxy7G01776' => 'aox', 'Aqoxy7G02316' => 'aox', 'Aqoxy7G03973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.12AFKW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B8730' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27IQR1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3F75VG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3RE0GA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41TCQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.527VTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FIR39' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5W8UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DA38EV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ63HS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H1I32C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HC27T5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4M8AP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7N3CZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9UVDZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LS1NQA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT1D4B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SKC4TM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCFV76' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF9Q1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQWD9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1ZM88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WE07RT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YCK7VH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJE6Q6' => 'arhy', 'AT1G28240' => 'ath', 'AT1G34550' => 'ath', 'AT1G53040' => 'ath', 'AT2G02910' => 'ath', 'AT4G09630' => 'ath', 'AT4G38500' => 'ath', 'AT5G42660' => 'ath', 'AT5G46220' => 'ath', 'ATR0152G026' => 'atr', 'ATR0564G343' => 'atr', 'ATR0706G151' => 'atr', 'ATR0733G207' => 'atr', 'ATR0751G234' => 'atr', 'ATR0807G048' => 'atr', 'ATR1091G084' => 'atr', 'Atru.chr10.1229' => 'acertr', 'Atru.chr10.1230' => 'acertr', 'Atru.chr10.1874' => 'acertr', 'Atru.chr11.1808' => 'acertr', 'Atru.chr13.1795' => 'acertr', 'Atru.chr13.570' => 'acertr', 'Atru.chr2.2608' => 'acertr', 'Atru.chr2.2609' => 'acertr', 'Atru.chr5.3428' => 'acertr', 'Atru.chr8.1171' => 'acertr', 'AUR62004651' => 'cqu', 'AUR62008675' => 'cqu', 'AUR62010014' => 'cqu', 'AUR62013004' => 'cqu', 'AUR62014825' => 'cqu', 'AUR62015015' => 'cqu', 'AUR62015151' => 'cqu', 'AUR62017020' => 'cqu', 'AUR62019422' => 'cqu', 'AUR62023570' => 'cqu', 'AUR62025571' => 'cqu', 'AUR62029098' => 'cqu', 'AUR62033863' => 'cqu', 'AUR62034296' => 'cqu', 'AUR62040075' => 'cqu', 'BcaB02g07334' => 'bca', 'BcaB02g10575' => 'bca', 'BcaB03g12119' => 'bca', 'BcaB03g12120' => 'bca', 'BcaB03g13945' => 'bca', 'BcaB04g17123' => 'bca', 'BcaB04g17867' => 'bca', 'BcaB04g19839' => 'bca', 'BcaB07g30317' => 'bca', 'BcaB07g32432' => 'bca', 'BcaB07g33362' => 'bca', 'BcaB08g36611' => 'bca', 'BcaC01g00028' => 'bca', 'BcaC01g01356' => 'bca', 'BcaC01g02034' => 'bca', 'BcaC01g06051' => 'bca', 'BcaC03g16839' => 'bca', 'BcaC03g17176' => 'bca', 'BcaC05g26829' => 'bca', 'BcaC06g31490' => 'bca', 'BcaC06g35344' => 'bca', 'BcaC06g36570' => 'bca', 'BcaC07g37537' => 'bca', 'BcaC08g43491' => 'bca', 'BcaC08g43773' => 'bca', 'BcaNung00234' => 'bca', 'BcaNung01982' => 'bca', 'BcaNung03707' => 'bca', 'BcaNung06454' => 'bca', 'BolC2t10762H' => 'bol', 'BolC2t11191H' => 'bol', 'BolC3t14322H' => 'bol', 'BolC3t19747H' => 'bol', 'BolC3t21425H' => 'bol', 'BolC4t27800H' => 'bol', 'BolC5t31423H' => 'bol', 'BolC6t35951H' => 'bol', 'BolC6t36282H' => 'bol', 'BolC7t40678H' => 'bol', 'BolC7t40679H' => 'bol', 'BolC7t42222H' => 'bol', 'BolC7t43492H' => 'bol', 'BolC7t46785H' => 'bol', 'BolC8t47853H' => 'bol', 'BolC9t56805H' => 'bol', 'BraA02t08000Z' => 'bra', 'BraA02t08341Z' => 'bra', 'BraA03t10936Z' => 'bra', 'BraA03t15657Z' => 'bra', 'BraA04t18100Z' => 'bra', 'BraA05t20523Z' => 'bra', 'BraA06t23353Z' => 'bra', 'BraA06t27473Z' => 'bra', 'BraA06t27769Z' => 'bra', 'BraA07t28928Z' => 'bra', 'BraA08t32236Z' => 'bra', 'BraA08t32841Z' => 'bra', 'BraA08t34524Z' => 'bra', 'BraA09t38742Z' => 'bra', 'BraA09t39295Z' => 'bra', 'C02p47180' => 'bna', 'C02p50990' => 'bna', 'C03p19360' => 'bna', 'C03p74950' => 'bna', 'C03p91000' => 'bna', 'C04p63260' => 'bna', 'C05p27050' => 'bna', 'C06p08750' => 'bna', 'C06p11490' => 'bna', 'C07p02820' => 'bna', 'C07p17180' => 'bna', 'C07p29440' => 'bna', 'C07p63730' => 'bna', 'C09p39260' => 'bna', 'CAN.G1164.34' => 'can', 'CAN.G1164.39' => 'can', 'CAN.G1530.3' => 'can', 'CAN.G162.61' => 'can', 'CAN.G176.6' => 'can', 'CAN.G289.49' => 'can', 'CAN.G370.21' => 'can', 'CAN.G370.22' => 'can', 'CAN.G371.117' => 'can', 'CAN.G58.37' => 'can', 'CAN.G588.98' => 'can', 'CANSAT21G2266' => 'cansat', 'CANSAT25G2799' => 'cansat', 'CANSAT35G0862' => 'cansat', 'CANSAT35G1704' => 'cansat', 'CANSAT35G1760' => 'cansat', 'CANSAT56G3971' => 'cansat', 'CANSAT56G4116' => 'cansat', 'CANSAT80G1259' => 'cansat', 'CARHR027730' => 'chi', 'CARHR033880' => 'chi', 'CARHR043270' => 'chi', 'CARHR145330' => 'chi', 'CARHR145340' => 'chi', 'CARHR175570' => 'chi', 'CARHR181570' => 'chi', 'CARHR258470' => 'chi', 'CARHR260490' => 'chi', 'CARHR294220' => 'chi', 'Carub.0001s2668' => 'cru', 'Carub.0001s3257' => 'cru', 'Carub.0001s4220' => 'cru', 'Carub.0005s0179' => 'cru', 'Carub.0006s2807' => 'cru', 'Carub.0007s0039' => 'cru', 'Carub.0008s0169' => 'cru', 'Carub.0008s0636' => 'cru', 'Ca_00338_v3' => 'car', 'Ca_00542_v3' => 'car', 'Ca_01844_v3' => 'car', 'Ca_10611_v3' => 'car', 'Ca_13326_v3' => 'car', 'Ca_17944_v3' => 'car', 'Ca_18546_v3' => 'car', 'Ca_24219_v3' => 'car', 'Ca_29972_v3' => 'car', 'CBR_g3681' => 'cbr', 'CBR_g40021' => 'cbr', 'Cc01_g08140' => 'ccan', 'Cc02_g13410' => 'ccan', 'Cc02_g37480' => 'ccan', 'Cc05_g12030' => 'ccan', 'Cc09_g03370' => 'ccan', 'Cc09_g10300' => 'ccan', 'Cc10_g03530' => 'ccan', 'Cc10_g11380' => 'ccan', 'CDE01G0176' => 'cde', 'CDE02G0675' => 'cde', 'CDE02G0942' => 'cde', 'CDE02G1153' => 'cde', 'CDE02G4177' => 'cde', 'CDE04G2117' => 'cde', 'CDE04G2736' => 'cde', 'CDE08G1161' => 'cde', 'CDE09G1238' => 'cde', 'Cfa000467' => 'cfa', 'Cfa000947' => 'cfa', 'Cfa004969' => 'cfa', 'Cfa005284' => 'cfa', 'Cfa008993' => 'cfa', 'Cfa018187' => 'cfa', 'Cfa018454' => 'cfa', 'Cfa020585' => 'cfa', 'Ciclev10000424m.g' => 'ccl', 'Ciclev10003605m.g' => 'ccl', 'Ciclev10007828m.g' => 'ccl', 'Ciclev10014620m.g' => 'ccl', 'Ciclev10015169m.g' => 'ccl', 'Ciclev10018291m.g' => 'ccl', 'Ciclev10028256m.g' => 'ccl', 'Ciclev10033822m.g' => 'ccl', 'CiPaw.05G060300' => 'cil', 'CiPaw.05G085000' => 'cil', 'CiPaw.06G083700' => 'cil', 'CiPaw.06G120300' => 'cil', 'CiPaw.09G060500' => 'cil', 'CiPaw.09G123800' => 'cil', 'CiPaw.11G169700' => 'cil', 'CiPaw.12G118300' => 'cil', 'CiPaw.15G071000' => 'cil', 'CiPaw.15G081900' => 'cil', 'ClCG01G024610' => 'cla', 'ClCG03G006070' => 'cla', 'ClCG05G019250' => 'cla', 'ClCG09G009500' => 'cla', 'ClCG11G008200' => 'cla', 'ClCG11G018080' => 'cla', 'COL.COLO4_17373' => 'col', 'COL.COLO4_22994' => 'col', 'COL.COLO4_26389' => 'col', 'COL.COLO4_27170' => 'col', 'COL.COLO4_31074' => 'col', 'COL.COLO4_31465' => 'col', 'COL.COLO4_36438' => 'col', 'COL.COLO4_36439' => 'col', 'Cpa.g.c38781' => 'cpa', 'Cpa.g.sc128.12' => 'cpa', 'Cpa.g.sc166.7' => 'cpa', 'Cpa.g.sc166.8' => 'cpa', 'Cpa.g.sc20.111' => 'cpa', 'Cpa.g.sc27.31' => 'cpa', 'Cpa.g.sc64.36' => 'cpa', 'Cpa.g.sc64.37' => 'cpa', 'Cpa.g.sc66.49' => 'cpa', 'Cpa.g.sc80.64' => 'cpa', 'CsaV3_1G012320' => 'csa', 'CsaV3_2G008480' => 'csa', 'CsaV3_2G033450' => 'csa', 'CsaV3_3G044830' => 'csa', 'CsaV3_4G033710' => 'csa', 'CsaV3_6G051730' => 'csa', 'CsaV3_7G025350' => 'csa', 'CSS0001067' => 'camsi', 'CSS0005996' => 'camsi', 'CSS0006590' => 'camsi', 'CSS0009673' => 'camsi', 'CSS0010201' => 'camsi', 'CSS0010549' => 'camsi', 'CSS0011364' => 'camsi', 'CSS0014473' => 'camsi', 'CSS0014961' => 'camsi', 'CSS0020191' => 'camsi', 'CSS0021165' => 'camsi', 'CSS0022306' => 'camsi', 'CSS0030591' => 'camsi', 'CSS0030696' => 'camsi', 'CSS0032653' => 'camsi', 'CSS0037487' => 'camsi', 'CSS0041102' => 'camsi', 'CSS0041261' => 'camsi', 'CSS0046246' => 'camsi', 'CSS0049256' => 'camsi', 'DCAR_004075' => 'dca', 'DCAR_011538' => 'dca', 'DCAR_019553' => 'dca', 'DCAR_020952' => 'dca', 'DCAR_021739' => 'dca', 'DCAR_027407' => 'dca', 'DCAR_027913' => 'dca', 'DCAR_028066' => 'dca', 'Dinv05899' => 'din', 'Dinv07563' => 'din', 'Dinv08010' => 'din', 'Dinv14125' => 'din', 'Dinv20172' => 'din', 'Dinv30743' => 'din', 'Dinv31229' => 'din', 'Dinv34162' => 'din', 'Dinv36028' => 'din', 'Dinv39368' => 'din', 'Dinv40565' => 'din', 'Dinv41706' => 'din', 'Duzib052G0089' => 'dzi', 'Duzib116G0641' => 'dzi', 'Duzib132G0069' => 'dzi', 'Duzib132G1219' => 'dzi', 'Duzib147G0278' => 'dzi', 'Duzib160G0480' => 'dzi', 'Duzib170G0661' => 'dzi', 'Duzib177G0591' => 'dzi', 'Duzib187G1353' => 'dzi', 'Duzib192G0858' => 'dzi', 'Duzib192G0883' => 'dzi', 'Duzib213G0506' => 'dzi', 'Duzib235G0289' => 'dzi', 'Duzib251G0422' => 'dzi', 'ECA232G3898' => 'eca', 'ECA233G5950' => 'eca', 'ECA234G1699' => 'eca', 'ECA234G2421' => 'eca', 'ECA236G0426' => 'eca', 'ECA236G4331' => 'eca', 'ECA248G2573' => 'eca', 'EL10Ac1g00077' => 'bvu', 'EL10Ac1g01746' => 'bvu', 'EL10Ac2g03464' => 'bvu', 'EL10Ac4g08176' => 'bvu', 'EL10Ac7g17521' => 'bvu', 'EL10Ac8g20386' => 'bvu', 'EL10Ac9g21343' => 'bvu', 'EL10Ac9g22688' => 'bvu', 'Eucgr.B03434' => 'egr', 'Eucgr.D00618' => 'egr', 'Eucgr.E02395' => 'egr', 'Eucgr.F01129' => 'egr', 'Eucgr.F02622' => 'egr', 'Eucgr.F04207' => 'egr', 'FAN01G0570' => 'fan', 'FAN03G3351' => 'fan', 'FAN06G3702' => 'fan', 'FAN07G2149' => 'fan', 'FAN10G3758' => 'fan', 'FAN11G1170' => 'fan', 'FAN11G2050' => 'fan', 'FAN11G2724' => 'fan', 'FAN12G1700' => 'fan', 'FAN12G2028' => 'fan', 'FAN15G1160' => 'fan', 'FAN15G3063' => 'fan', 'FAN16G2540' => 'fan', 'FAN16G3077' => 'fan', 'FAN16G3624' => 'fan', 'FAN17G0221' => 'fan', 'FAN20G2492' => 'fan', 'FAN20G2905' => 'fan', 'FAN21G0548' => 'fan', 'FAN21G1300' => 'fan', 'FAN22G0077' => 'fan', 'FAN22G1315' => 'fan', 'FAN24G1280' => 'fan', 'FAN24G1445' => 'fan', 'FAN24G3527' => 'fan', 'FAN25G0464' => 'fan', 'FAN25G2885' => 'fan', 'FAN25G3270' => 'fan', 'FAN27G1101' => 'fan', 'FAN27G2846' => 'fan', 'FAN27G3524' => 'fan', 'FvH4_2g11770' => 'fve', 'FvH4_2g15630' => 'fve', 'FvH4_3g05570' => 'fve', 'FvH4_3g09110' => 'fve', 'FvH4_3g19940' => 'fve', 'FvH4_4g04821' => 'fve', 'FvH4_4g31480' => 'fve', 'FvH4_7g01740' => 'fve', 'Glyma.05G130400' => 'gma', 'Glyma.05G156400' => 'gma', 'Glyma.07G197000' => 'gma', 'Glyma.08G085151' => 'gma', 'Glyma.08G114500' => 'gma', 'Glyma.08G300400' => 'gma', 'Glyma.10G215800' => 'gma', 'Glyma.12G224400' => 'gma', 'Glyma.13G179300' => 'gma', 'Glyma.13G218151' => 'gma', 'Glyma.13G238800' => 'gma', 'Glyma.13G276900' => 'gma', 'Glyma.14G078200' => 'gma', 'Glyma.15G074500' => 'gma', 'Glyma.15G094100' => 'gma', 'Glyma.17G247200' => 'gma', 'Glyma.18G120100' => 'gma', 'Glyma.20G176000' => 'gma', 'Gohir.A01G063600' => 'ghi', 'Gohir.A01G170301' => 'ghi', 'Gohir.A02G060500' => 'ghi', 'Gohir.A05G133850' => 'ghi', 'Gohir.A05G161400' => 'ghi', 'Gohir.A06G012900' => 'ghi', 'Gohir.A06G035901' => 'ghi', 'Gohir.A06G127100' => 'ghi', 'Gohir.A06G210500' => 'ghi', 'Gohir.A08G008650' => 'ghi', 'Gohir.A09G072700' => 'ghi', 'Gohir.A09G088301' => 'ghi', 'Gohir.A10G040600' => 'ghi', 'Gohir.A12G036300' => 'ghi', 'Gohir.A12G143350' => 'ghi', 'Gohir.A12G165500' => 'ghi', 'Gohir.A13G145700' => 'ghi', 'Gohir.D01G050000' => 'ghi', 'Gohir.D01G051366' => 'ghi', 'Gohir.D01G161350' => 'ghi', 'Gohir.D02G065900' => 'ghi', 'Gohir.D05G164200' => 'ghi', 'Gohir.D05G355500' => 'ghi', 'Gohir.D06G010400' => 'ghi', 'Gohir.D06G111250' => 'ghi', 'Gohir.D06G132000' => 'ghi', 'Gohir.D06G210500' => 'ghi', 'Gohir.D07G165675' => 'ghi', 'Gohir.D08G062240' => 'ghi', 'Gohir.D08G086101' => 'ghi', 'Gohir.D08G138060' => 'ghi', 'Gohir.D09G072300' => 'ghi', 'Gohir.D10G041400' => 'ghi', 'Gohir.D11G191020' => 'ghi', 'Gohir.D11G212066' => 'ghi', 'Gohir.D12G036300' => 'ghi', 'Gohir.D12G168600' => 'ghi', 'Gohir.D13G150600' => 'ghi', 'Gorai.001G057300' => 'gra', 'Gorai.002G069900' => 'gra', 'Gorai.002G200000' => 'gra', 'Gorai.003G067600' => 'gra', 'Gorai.005G074800' => 'gra', 'Gorai.006G087300' => 'gra', 'Gorai.008G037500' => 'gra', 'Gorai.008G181400' => 'gra', 'Gorai.009G169400' => 'gra', 'Gorai.009G387900' => 'gra', 'Gorai.010G013300' => 'gra', 'Gorai.010G153800' => 'gra', 'Gorai.010G255800' => 'gra', 'Gorai.011G043700' => 'gra', 'Gorai.011G198900' => 'gra', 'Gorai.013G168400' => 'gra', 'GSVIVG01005212001' => 'vvi', 'GSVIVG01006163001' => 'vvi', 'GSVIVG01009625001' => 'vvi', 'GSVIVG01014338001' => 'vvi', 'GSVIVG01020005001' => 'vvi', 'GSVIVG01021450001' => 'vvi', 'GSVIVG01023975001' => 'vvi', 'GSVIVG01034490001' => 'vvi', 'HanXRQChr04g0112071' => 'han', 'HanXRQChr05g0131151' => 'han', 'HanXRQChr09g0262371' => 'han', 'HanXRQChr09g0268401' => 'han', 'HanXRQChr10g0279241' => 'han', 'HanXRQChr10g0297961' => 'han', 'HanXRQChr11g0326231' => 'han', 'HanXRQChr11g0328471' => 'han', 'HanXRQChr16g0507941' => 'han', 'HanXRQChr17g0560211' => 'han', 'Haze_02108' => 'cav', 'Haze_02428' => 'cav', 'Haze_05593' => 'cav', 'Haze_06448' => 'cav', 'Haze_09427' => 'cav', 'Haze_12022' => 'cav', 'Haze_17612' => 'cav', 'Haze_17928' => 'cav', 'Hma1.2p1_0032F.1_g019250' => 'hma', 'Hma1.2p1_0163F.1_g072690' => 'hma', 'Hma1.2p1_0265F.1_g106710' => 'hma', 'Hma1.2p1_0286F.1_g113970' => 'hma', 'Hma1.2p1_0363F.1_g136640' => 'hma', 'Hma1.2p1_0584F.1_g183470' => 'hma', 'Hma1.2p1_0885F.1_g232570' => 'hma', 'HPP92_006022' => 'vpl', 'HPP92_007320' => 'vpl', 'HPP92_011521' => 'vpl', 'HPP92_019387' => 'vpl', 'HPP92_024038' => 'vpl', 'Hund05891' => 'sun', 'Hund06450' => 'sun', 'Hund12053' => 'sun', 'Hund16800' => 'sun', 'Hund21222' => 'sun', 'Hund22896' => 'sun', 'Hund23746' => 'sun', 'Hund27083' => 'sun', 'Lalb_Chr02g0141831' => 'lal', 'Lalb_Chr02g0141841' => 'lal', 'Lalb_Chr05g0220411' => 'lal', 'Lalb_Chr06g0162081' => 'lal', 'Lalb_Chr09g0327651' => 'lal', 'Lalb_Chr13g0295051' => 'lal', 'Lalb_Chr15g0086801' => 'lal', 'Lalb_Chr16g0383781' => 'lal', 'Lalb_Chr16g0383791' => 'lal', 'Lalb_Chr18g0055441' => 'lal', 'Lalb_Chr18g0059611' => 'lal', 'Lalb_Chr20g0109661' => 'lal', 'Lalb_Chr20g0109831' => 'lal', 'Lalb_Chr20g0121871' => 'lal', 'Lalb_Chr22g0355361' => 'lal', 'Lalb_Chr25g0286371' => 'lal', 'Lj1A1187G43' => 'lonja', 'Lj1A1205T50' => 'lonja', 'Lj1A800G33' => 'lonja', 'Lj1C1187T7' => 'lonja', 'Lj1C843T11' => 'lonja', 'Lj1g0010940' => 'lja', 'Lj2A288T69' => 'lonja', 'Lj3g0024276' => 'lja', 'Lj4A47T76' => 'lonja', 'Lj4g0005805' => 'lja', 'Lj4g0006097' => 'lja', 'Lj4g0008528' => 'lja', 'Lj4g0024907' => 'lja', 'Lj5g0012472' => 'lja', 'Lj5g0018648' => 'lja', 'Lj6C789G1' => 'lonja', 'Lj6g0004000' => 'lja', 'Lj7A292G67' => 'lonja', 'Lj7A292T64' => 'lonja', 'Lj9A400T58' => 'lonja', 'Lsat_1_v5_gn_1_126181' => 'lsa', 'Lsat_1_v5_gn_4_123041' => 'lsa', 'Lsat_1_v5_gn_4_133620' => 'lsa', 'Lsat_1_v5_gn_4_53221' => 'lsa', 'Lsat_1_v5_gn_4_71961' => 'lsa', 'Lsat_1_v5_gn_7_105241' => 'lsa', 'Lsat_1_v5_gn_7_21361' => 'lsa', 'Lsat_1_v5_gn_7_28860' => 'lsa', 'Lsat_1_v5_gn_7_31260' => 'lsa', 'Lsat_1_v5_gn_8_52801' => 'lsa', 'Manes.02G191400' => 'mes', 'Manes.03G110100' => 'mes', 'Manes.04G071100' => 'mes', 'Manes.05G100500' => 'mes', 'Manes.05G164700' => 'mes', 'Manes.15G087000' => 'mes', 'Manes.15G121500' => 'mes', 'Manes.16G028300' => 'mes', 'Manes.17G046100' => 'mes', 'Manes.17G069800' => 'mes', 'Manes.18G100500' => 'mes', 'Mapoly0002s0109' => 'mpo', 'Mapoly0024s0007' => 'mpo', 'Mapoly0089s0032' => 'mpo', 'MBI04_g42241_MAGBIO' => 'mbi', 'MBI05_g11988_MAGBIO' => 'mbi', 'MBI05_g35452_MAGBIO' => 'mbi', 'MBI07_g30179_MAGBIO' => 'mbi', 'MBI07_g35859_MAGBIO' => 'mbi', 'MBI07_g35860_MAGBIO' => 'mbi', 'MBI07_g37166_MAGBIO' => 'mbi', 'MBI08_g18172_MAGBIO' => 'mbi', 'MBI09_g08441_MAGBIO' => 'mbi', 'MBI13_g01676_MAGBIO' => 'mbi', 'MBI14_g42955_MAGBIO' => 'mbi', 'MBI16_g13161_MAGBIO' => 'mbi', 'MBI17_g27204_MAGBIO' => 'mbi', 'MBI19_g21595_MAGBIO' => 'mbi', 'MD00G1148400' => 'mdo', 'MD02G1301200' => 'mdo', 'MD03G1227800' => 'mdo', 'MD05G1041100' => 'mdo', 'MD05G1124800' => 'mdo', 'MD05G1284000' => 'mdo', 'MD05G1338800' => 'mdo', 'MD05G1338900' => 'mdo', 'MD07G1022800' => 'mdo', 'MD10G1047500' => 'mdo', 'MD10G1127500' => 'mdo', 'MD10G1262300' => 'mdo', 'MD10G1293800' => 'mdo', 'MD16G1074300' => 'mdo', 'Medtr1g021670' => 'mtr', 'Medtr1g096320' => 'mtr', 'Medtr2g013690' => 'mtr', 'Medtr2g019450' => 'mtr', 'Medtr2g085170' => 'mtr', 'Medtr4g088785' => 'mtr', 'Medtr8g055930' => 'mtr', 'Medtr8g085850' => 'mtr', 'MELO3C002605.2' => 'cme', 'MELO3C003891.2' => 'cme', 'MELO3C004012.2' => 'cme', 'MELO3C007134.2' => 'cme', 'MELO3C008118.2' => 'cme', 'MELO3C016700.2' => 'cme', 'MELO3C024127.2' => 'cme', 'MELO3C033361.2' => 'cme', 'MELO3C033362.2' => 'cme', 'Migut.C00430' => 'egut', 'Migut.C01246' => 'egut', 'Migut.E00101' => 'egut', 'Migut.H01486' => 'egut', 'Migut.H01939' => 'egut', 'Migut.K00360' => 'egut', 'Migut.M00910' => 'egut', 'Migut.M01139' => 'egut', 'Migut.N02677' => 'egut', 'MSTRG.13252' => 'ama', 'MSTRG.14701' => 'ama', 'MSTRG.1521' => 'ama', 'MSTRG.15884' => 'ama', 'MSTRG.16242' => 'ama', 'MSTRG.22285' => 'ama', 'MSTRG.22444' => 'ama', 'MSTRG.2349' => 'ama', 'MSTRG.26308' => 'ama', 'MSTRG.28296' => 'ama', 'MSTRG.9895' => 'ama', 'Nitab4.5_0000110g0060' => 'nta', 'Nitab4.5_0000420g0130' => 'nta', 'Nitab4.5_0000422g0030' => 'nta', 'Nitab4.5_0000560g0180' => 'nta', 'Nitab4.5_0000703g0100' => 'nta', 'Nitab4.5_0000786g0200' => 'nta', 'Nitab4.5_0001336g0020' => 'nta', 'Nitab4.5_0001796g0030' => 'nta', 'Nitab4.5_0003348g0060' => 'nta', 'Nitab4.5_0003698g0040' => 'nta', 'Nitab4.5_0003942g0090' => 'nta', 'Nitab4.5_0004775g0070' => 'nta', 'Nitab4.5_0004864g0030' => 'nta', 'Nitab4.5_0005615g0020' => 'nta', 'Nitab4.5_0009288g0030' => 'nta', 'Nitab4.5_0009341g0010' => 'nta', 'Nitab4.5_0009535g0010' => 'nta', 'Nn1g03995' => 'nnu', 'Nn1g04100' => 'nnu', 'Nn1g06530' => 'nnu', 'Nn3g16404' => 'nnu', 'Nn3g17212' => 'nnu', 'Nn3g20776' => 'nnu', 'Nn3g21923' => 'nnu', 'Nn5g27737' => 'nnu', 'Nn5g29461' => 'nnu', 'Nn7g38355' => 'nnu', 'Nn8g39873' => 'nnu', 'Oeu000548.2' => 'oeu', 'Oeu004672.1' => 'oeu', 'Oeu015605.2' => 'oeu', 'Oeu016092.1' => 'oeu', 'Oeu017879.3' => 'oeu', 'Oeu024910.1' => 'oeu', 'Oeu028965.1' => 'oeu', 'Oeu031269.1' => 'oeu', 'Oeu031270.1' => 'oeu', 'Oeu032535.1' => 'oeu', 'Oeu034151.1' => 'oeu', 'Oeu034152.1' => 'oeu', 'Oeu034588.2' => 'oeu', 'Oeu050846.1' => 'oeu', 'Oeu050849.2' => 'oeu', 'Oeu051063.2' => 'oeu', 'Oeu052368.1' => 'oeu', 'Oeu052370.1' => 'oeu', 'Os01g0210400' => 'osa', 'Os01g0304300' => 'osa', 'Os01g0749100' => 'osa', 'Os02g0745800' => 'osa', 'Os03g0769050' => 'osa', 'Os05g0531500' => 'osa', 'Os06g0724300' => 'osa', 'Os11g0198100' => 'osa', 'Peaxi162Scf00069g01425' => 'pax', 'Peaxi162Scf00280g00811' => 'pax', 'Peaxi162Scf00310g00615' => 'pax', 'Peaxi162Scf00362g00542' => 'pax', 'Peaxi162Scf00461g00310' => 'pax', 'Peaxi162Scf00530g00118' => 'pax', 'Peaxi162Scf00541g00057' => 'pax', 'Peaxi162Scf00661g00017' => 'pax', 'Peaxi162Scf00926g00027' => 'pax', 'Peaxi162Scf01064g00263' => 'pax', 'Peaxi162Scf01211g00135' => 'pax', 'PGR004G2336' => 'pgr', 'PGR042G0327' => 'pgr', 'PGR042G1957' => 'pgr', 'PGR042G2003' => 'pgr', 'PGR042G3929' => 'pgr', 'PGR083G1137' => 'pgr', 'PGR083G1364' => 'pgr', 'PGSC0003DMG400003381' => 'stu', 'PGSC0003DMG400003417' => 'stu', 'PGSC0003DMG400008981' => 'stu', 'PGSC0003DMG400012417' => 'stu', 'PGSC0003DMG400012823' => 'stu', 'PGSC0003DMG400016885' => 'stu', 'PGSC0003DMG400022812' => 'stu', 'PGSC0003DMG400029726' => 'stu', 'PGSC0003DMG401009243' => 'stu', 'PGSC0003DMG401031505' => 'stu', 'PGSC0003DMG402031505' => 'stu', 'Phvul.001G017600' => 'pvu', 'Phvul.002G193500' => 'pvu', 'Phvul.002G228900' => 'pvu', 'Phvul.002G236800' => 'pvu', 'Phvul.003G049500' => 'pvu', 'Phvul.005G072000' => 'pvu', 'Phvul.006G164800' => 'pvu', 'Phvul.006G185100' => 'pvu', 'Phvul.007G090000' => 'pvu', 'Potri.001G399800' => 'ptr', 'Potri.002G149900' => 'ptr', 'Potri.004G044100' => 'ptr', 'Potri.004G177600' => 'ptr', 'Potri.009G138000' => 'ptr', 'Potri.010G094000' => 'ptr', 'Potri.011G053000' => 'ptr', 'Potri.011G119300' => 'ptr', 'Potri.013G113700' => 'ptr', 'Potri.018G107800' => 'ptr', 'Potri.019G084100' => 'ptr', 'Pp3c14_23720' => 'ppa', 'Pp3c16_6340' => 'ppa', 'Pp3c23_13420' => 'ppa', 'Pp3c24_2740' => 'ppa', 'Pp3c25_860' => 'ppa', 'Pp3c8_21750' => 'ppa', 'Prupe.1G273000' => 'ppe', 'Prupe.1G273700' => 'ppe', 'Prupe.1G274100' => 'ppe', 'Prupe.2G023300' => 'ppe', 'Prupe.4G048000' => 'ppe', 'Prupe.4G080400' => 'ppe', 'Prupe.4G181200' => 'ppe', 'Prupe.8G056900' => 'ppe', 'Prupe.8G168700' => 'ppe', 'Psat1g189080' => 'psa', 'Psat1g204760' => 'psa', 'Psat4g175560' => 'psa', 'Psat4g177720' => 'psa', 'Psat5g244240' => 'psa', 'Psat6g010720' => 'psa', 'Psat6g187200' => 'psa', 'Psat7g072040' => 'psa', 'PSO017G3501' => 'pso', 'PSO063G2148' => 'pso', 'PSO063G5608' => 'pso', 'PSO210G6392' => 'pso', 'PSO541G2319' => 'pso', 'PSO541G2836' => 'pso', 'PSO541G4012' => 'pso', 'PSO541G6253' => 'pso', 'PSO675G0580' => 'pso', 'PSO675G0856' => 'pso', 'PSO675G5635' => 'pso', 'PSO675G9157' => 'pso', 'PSO832G1660' => 'pso', 'PSO832G1969' => 'pso', 'QL02p007186' => 'qlo', 'QL02p033904' => 'qlo', 'QL03p064391' => 'qlo', 'QL05p040593' => 'qlo', 'QL05p058242' => 'qlo', 'QL08p021825' => 'qlo', 'QL11p004981' => 'qlo', 'RcHm_v2.0_Chr1g0318301' => 'rch', 'RcHm_v2.0_Chr4g0418501' => 'rch', 'RcHm_v2.0_Chr4g0439971' => 'rch', 'RcHm_v2.0_Chr5g0008541' => 'rch', 'RcHm_v2.0_Chr5g0014101' => 'rch', 'RcHm_v2.0_Chr5g0014131' => 'rch', 'RcHm_v2.0_Chr5g0033621' => 'rch', 'RcHm_v2.0_Chr6g0272041' => 'rch', 'RcHm_v2.0_Chr6g0278831' => 'rch', 'Rhsim02G0130400' => 'rsi', 'Rhsim02G0171100' => 'rsi', 'Rhsim05G0053000' => 'rsi', 'Rhsim05G0053100' => 'rsi', 'Rhsim06G0096500' => 'rsi', 'Rhsim06G0096600' => 'rsi', 'Rhsim06G0199100' => 'rsi', 'Rhsim12G0062300' => 'rsi', 'Rhsim12G0062800' => 'rsi', 'Sabra02G0118600' => 'sbr', 'Sabra04G0027300' => 'sbr', 'Sabra04G0119500' => 'sbr', 'Sabra08G0112500' => 'sbr', 'Sabra11G0036800' => 'sbr', 'Sabra11G0103800' => 'sbr', 'Sabra13G0096300' => 'sbr', 'Sabra16G0262300' => 'sbr', 'Sabra18G0091700' => 'sbr', 'Sabra19G0095400' => 'sbr', 'SalBow6G3080' => 'sbo', 'SalBow7G1157' => 'sbo', 'SalBow7G2123' => 'sbo', 'SalBow7G2285' => 'sbo', 'SalBow7G3537' => 'sbo', 'SalBow8G2947' => 'sbo', 'SalBow8G4463' => 'sbo', 'SalBow8G5466' => 'sbo', 'Sc01g0001750' => 'sci', 'Sc02g0006640' => 'sci', 'Sc02g0006670' => 'sci', 'Sc04g0008220' => 'sci', 'Sc05g0006190' => 'sci', 'Sc08g0002760' => 'sci', 'Sc17g0006170' => 'sci', 'Sc22g0002050' => 'sci', 'Sc23g0001190' => 'sci', 'Sc24g0000980' => 'sci', 'Sed0006245' => 'sed', 'Sed0007543' => 'sed', 'Sed0009411' => 'sed', 'Sed0010765' => 'sed', 'Sed0012944' => 'sed', 'Sed0014682' => 'sed', 'Sed0016174' => 'sed', 'Sed0016796' => 'sed', 'Sed0020317' => 'sed', 'Sed0021467' => 'sed', 'SEGI_01316' => 'sgi', 'SEGI_03374' => 'sgi', 'SEGI_16265' => 'sgi', 'SEGI_18569' => 'sgi', 'SEGI_20351' => 'sgi', 'SEGI_26395' => 'sgi', 'SEGI_29469' => 'sgi', 'SEGI_34771' => 'sgi', 'SEGI_36769' => 'sgi', 'SEGI_37139' => 'sgi', 'SGA_v2.0_scaffold100G29687' => 'sas', 'SGA_v2.0_scaffold118G32472' => 'sas', 'SGA_v2.0_scaffold14G07051' => 'sas', 'SGA_v2.0_scaffold183G39845' => 'sas', 'SGA_v2.0_scaffold1G00174' => 'sas', 'SGA_v2.0_scaffold22G09714' => 'sas', 'SGA_v2.0_scaffold333G48992' => 'sas', 'SGA_v2.0_scaffold46G17491' => 'sas', 'SGA_v2.0_scaffold49G18294' => 'sas', 'SGA_v2.0_scaffold63G21658' => 'sas', 'SHI01741' => 'shi', 'SHI05771' => 'shi', 'SHI18077' => 'shi', 'SHI20525' => 'shi', 'SHI20527' => 'shi', 'SHI20528' => 'shi', 'SMO172G0185' => 'smo', 'SMO198G0020' => 'smo', 'SMO351G0006' => 'smo', 'SMO356G0118' => 'smo', 'SMO358G0296' => 'smo', 'SMO367G0079' => 'smo', 'SMO367G1277' => 'smo', 'Solyc01g014220.3' => 'sly', 'Solyc01g111770.2' => 'sly', 'Solyc02g078180.3' => 'sly', 'Solyc03g006430.3' => 'sly', 'Solyc03g006456.1' => 'sly', 'Solyc03g079860.2' => 'sly', 'Solyc04g079770.3' => 'sly', 'Solyc05g007430.4' => 'sly', 'Solyc07g063150.3' => 'sly', 'Solyc08g016620.3' => 'sly', 'Solyc09g057590.3' => 'sly', 'Solyc09g057600.1' => 'sly', 'Solyc10g009050.3' => 'sly', 'Solyc11g017420.2' => 'sly', 'Sopen01g053810' => 'spe', 'Sopen02g023040' => 'spe', 'Sopen03g002440' => 'spe', 'Sopen04g033350' => 'spe', 'Sopen05g003310' => 'spe', 'Sopen07g004050' => 'spe', 'Sopen07g031340' => 'spe', 'Sopen08g006990' => 'spe', 'Sopen10g004830' => 'spe', 'Sopen11g009370' => 'spe', 'Sp1g24450' => 'spa', 'Sp1g29670' => 'spa', 'Sp1g39600' => 'spa', 'Sp2g11080' => 'spa', 'Sp2g13970' => 'spa', 'Sp4g16130' => 'spa', 'Sp6g13080' => 'spa', 'Sp7g37270' => 'spa', 'TAR371G0065' => 'tar', 'TAR376G0340' => 'tar', 'TAR376G0435' => 'tar', 'TAR381G0002' => 'tar', 'TAR381G1236' => 'tar', 'TAR624G0055' => 'tar', 'TAR624G0324' => 'tar', 'TAR624G0696' => 'tar', 'TAR624G0906' => 'tar', 'TAR625G0107' => 'tar', 'TAR626G0015' => 'tar', 'TAR626G1356' => 'tar', 'TAR627G0888' => 'tar', 'TAR628G0399' => 'tar', 'TAR628G1327' => 'tar', 'TAR629G2831' => 'tar', 'TAR629G2874' => 'tar', 'TAR633G1432' => 'tar', 'TAR633G2771' => 'tar', 'THA.LOC104803394' => 'tha', 'THA.LOC104805153' => 'tha', 'THA.LOC104806784' => 'tha', 'THA.LOC104810473' => 'tha', 'THA.LOC104813100' => 'tha', 'THA.LOC104814215' => 'tha', 'THA.LOC104815554' => 'tha', 'THA.LOC104820544' => 'tha', 'THA.LOC104824754' => 'tha', 'THA.LOC104827717' => 'tha', 'Thecc.02G031400' => 'tca', 'Thecc.02G055900' => 'tca', 'Thecc.02G350800' => 'tca', 'Thecc.06G150900' => 'tca', 'Thecc.06G186600' => 'tca', 'Thecc.07G089600' => 'tca', 'Thecc.08G020400' => 'tca', 'Thecc.08G182100' => 'tca', 'Thhalv10000873m.g' => 'esa', 'Thhalv10004185m.g' => 'esa', 'Thhalv10006981m.g' => 'esa', 'Thhalv10007204m.g' => 'esa', 'Thhalv10011374m.g' => 'esa', 'Thhalv10013482m.g' => 'esa', 'Thhalv10017801m.g' => 'esa', 'Thhalv10024983m.g' => 'esa', 'TPR.G12072' => 'tpr', 'TPR.G15769' => 'tpr', 'TPR.G16504' => 'tpr', 'TPR.G16506' => 'tpr', 'TPR.G24345' => 'tpr', 'TPR.G26666' => 'tpr', 'TPR.G27320' => 'tpr', 'TPR.G31819' => 'tpr', 'TPR.G38879' => 'tpr', 'TPR.G39015' => 'tpr', 'TPR.G8819' => 'tpr', 'TWI09G0924' => 'twi', 'TWI12G0811' => 'twi', 'TWI12G1294' => 'twi', 'TWI31G0150' => 'twi', 'TWI36G1262' => 'twi', 'TWI38G1287' => 'twi', 'TWI38G1633' => 'twi', 'TWI38G1982' => 'twi', 'TWI39G0116' => 'twi', 'TWI60G1011' => 'twi', 'TWI63G0171' => 'twi', 'TWI73G0839' => 'twi', 'TWI79G1511' => 'twi', 'unitig_0.g915' => 'ugi', 'unitig_0.g916' => 'ugi', 'unitig_21.g20219' => 'ugi', 'unitig_21.g20416' => 'ugi', 'unitig_578.g16132' => 'ugi', 'unitig_578.g16718' => 'ugi', 'unitig_62.g23481' => 'ugi', 'unitig_744.g24535' => 'ugi', 'unitig_749.g13525' => 'ugi', 'vmacro01248' => 'vma', 'vmacro02290' => 'vma', 'vmacro10946' => 'vma', 'vmacro11865' => 'vma', 'vmacro12493' => 'vma', 'vmacro17322' => 'vma', 'vmacro21599' => 'vma', 'vmacro23041' => 'vma', 'VMungo0251G0004' => 'vmu', 'VMungo0251G2639' => 'vmu', 'VMungo0251G2967' => 'vmu', 'VMungo0540G0864' => 'vmu', 'VMungo0540G1569' => 'vmu', 'VMungo0647G0317' => 'vmu', 'VMungo0720G1373' => 'vmu', 'VMungo0720G1508' => 'vmu', 'VMungo1080G0485' => 'vmu', 'VMungo1215G3177' => 'vmu', 'Zm00001eb112600' => 'zma', 'Zm00001eb120220' => 'zma', 'Zm00001eb153240' => 'zma', 'Zm00001eb168880' => 'zma', 'Zm00001eb213920' => 'zma', 'Zm00001eb228280' => 'zma', 'Zm00001eb254580' => 'zma', 'Zm00001eb272180' => 'zma', 'Zm00001eb293190' => 'zma', 'Zm00001eb322930' => 'zma', 'Zm00001eb353360' => 'zma', 'Zm00001eb353390' => 'zma', 'Zm00001eb353430' => 'zma', 'Zm00001eb353440' => 'zma', 'Zm00001eb353780' => 'zma' ) $gf_id = 'HOM05D000499' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000499' ) $data_identifier = 'HOM05D000499' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 29, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 12, 'amhyb' => (int) 8, 'aly' => (int) 12, 'aox' => (int) 9, 'arhy' => (int) 26, 'ath' => (int) 8, 'atr' => (int) 7, 'acertr' => (int) 10, 'cqu' => (int) 15, 'bca' => (int) 29, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 11, 'cansat' => (int) 8, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 9, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 8, 'cpa' => (int) 10, 'csa' => (int) 7, 'camsi' => (int) 20, 'dca' => (int) 8, 'din' => (int) 12, 'dzi' => (int) 14, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 6, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 38, 'gra' => (int) 16, 'vvi' => (int) 8, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 5, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 11, 'lja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 11, 'mpo' => (int) 3, 'mbi' => (int) 14, 'mdo' => (int) 14, 'mtr' => (int) 8, 'cme' => (int) 9, 'egut' => (int) 9, 'ama' => (int) 11, 'nta' => (int) 17, 'nnu' => (int) 11, 'oeu' => (int) 18, 'osa' => (int) 8, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 6, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 9, 'rsi' => (int) 9, 'sbr' => (int) 10, 'sbo' => (int) 8, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 10, 'sas' => (int) 10, 'shi' => (int) 6, 'smo' => (int) 7, 'sly' => (int) 14, 'spe' => (int) 10, 'spa' => (int) 8, 'tar' => (int) 19, 'tha' => (int) 10, 'tca' => (int) 8, 'esa' => (int) 8, 'tpr' => (int) 11, 'twi' => (int) 13, 'ugi' => (int) 9, 'vma' => (int) 8, 'vmu' => (int) 10, 'zma' => (int) 15 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb353780' $species_info = array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ) $local_species = 'vma' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000499', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1066', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p29780' => 'bna', 'A02p33180' => 'bna', 'A03p16470' => 'bna', 'A03p66010' => 'bna', 'A04p25970' => 'bna', 'A06p01270' => 'bna', 'A06p46080' => 'bna', 'A07p11400' => 'bna', 'A08p01840' => 'bna', 'A08p08230' => 'bna', 'A08p25740' => 'bna', 'A09p32070' => 'bna', 'A09p37830' => 'bna', 'A09p42840' => 'bna', 'A09p42850' => 'bna', 'Aa31LG10G2060' => 'aar', 'Aa31LG2G7410' => 'aar', 'Aa31LG6G10200' => 'aar', 'Aa31LG6G16680' => 'aar', 'Aa31LG6G8470' => 'aar', 'Aa31LG9G12730' => 'aar', 'Aa31LG9G13680' => 'aar', 'Aa31LG9G14920' => 'aar', 'Aa31LG9G6650' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4977' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5467' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3254' => 'aag', 'Actinidia02578' => 'ach', 'Actinidia07693' => 'ach', 'Actinidia08413' => 'ach', 'Actinidia08414' => 'ach', 'Actinidia15289' => 'ach', 'Actinidia19871' => 'ach', 'Actinidia21475' => 'ach', 'Actinidia22576' => 'ach', 'Actinidia28327' => 'ach', 'Actinidia32491' => 'ach', 'Actinidia39463' => 'ach', 'Actinidia39571' => 'ach', 'Ah.01g013750' => 'amhyb', 'Ah.01g023210' => 'amhyb', 'Ah.04g164850' => 'amhyb', 'Ah.05g178060' => 'amhyb', 'Ah.07g204270' => 'amhyb', 'Ah.07g208480' => 'amhyb', 'Ah.09g237410' => 'amhyb', 'Ah.14g089460' => 'amhyb', 'AL1G41790' => 'aly', 'AL1G49050' => 'aly', 'AL1G53810' => 'aly', 'AL1G61400' => 'aly', 'AL4G18580' => 'aly', 'AL5G12510' => 'aly', 'AL5G12540' => 'aly', 'AL6G43230' => 'aly', 'AL7G10370' => 'aly', 'AL7G19250' => 'aly', 'AL8G12240' => 'aly', 'AL8G18540' => 'aly', 'Aqoxy1G02409' => 'aox', 'Aqoxy2G03993' => 'aox', 'Aqoxy3G03357' => 'aox', 'Aqoxy4G00785' => 'aox', 'Aqoxy5G02598' => 'aox', 'Aqoxy6G00132' => 'aox', 'Aqoxy7G01776' => 'aox', 'Aqoxy7G02316' => 'aox', 'Aqoxy7G03973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.12AFKW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B8730' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27IQR1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3F75VG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3RE0GA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41TCQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.527VTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FIR39' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5W8UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DA38EV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ63HS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H1I32C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HC27T5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4M8AP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7N3CZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9UVDZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LS1NQA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT1D4B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SKC4TM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCFV76' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF9Q1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQWD9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1ZM88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WE07RT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YCK7VH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJE6Q6' => 'arhy', 'AT1G28240' => 'ath', 'AT1G34550' => 'ath', 'AT1G53040' => 'ath', 'AT2G02910' => 'ath', 'AT4G09630' => 'ath', 'AT4G38500' => 'ath', 'AT5G42660' => 'ath', 'AT5G46220' => 'ath', 'ATR0152G026' => 'atr', 'ATR0564G343' => 'atr', 'ATR0706G151' => 'atr', 'ATR0733G207' => 'atr', 'ATR0751G234' => 'atr', 'ATR0807G048' => 'atr', 'ATR1091G084' => 'atr', 'Atru.chr10.1229' => 'acertr', 'Atru.chr10.1230' => 'acertr', 'Atru.chr10.1874' => 'acertr', 'Atru.chr11.1808' => 'acertr', 'Atru.chr13.1795' => 'acertr', 'Atru.chr13.570' => 'acertr', 'Atru.chr2.2608' => 'acertr', 'Atru.chr2.2609' => 'acertr', 'Atru.chr5.3428' => 'acertr', 'Atru.chr8.1171' => 'acertr', 'AUR62004651' => 'cqu', 'AUR62008675' => 'cqu', 'AUR62010014' => 'cqu', 'AUR62013004' => 'cqu', 'AUR62014825' => 'cqu', 'AUR62015015' => 'cqu', 'AUR62015151' => 'cqu', 'AUR62017020' => 'cqu', 'AUR62019422' => 'cqu', 'AUR62023570' => 'cqu', 'AUR62025571' => 'cqu', 'AUR62029098' => 'cqu', 'AUR62033863' => 'cqu', 'AUR62034296' => 'cqu', 'AUR62040075' => 'cqu', 'BcaB02g07334' => 'bca', 'BcaB02g10575' => 'bca', 'BcaB03g12119' => 'bca', 'BcaB03g12120' => 'bca', 'BcaB03g13945' => 'bca', 'BcaB04g17123' => 'bca', 'BcaB04g17867' => 'bca', 'BcaB04g19839' => 'bca', 'BcaB07g30317' => 'bca', 'BcaB07g32432' => 'bca', 'BcaB07g33362' => 'bca', 'BcaB08g36611' => 'bca', 'BcaC01g00028' => 'bca', 'BcaC01g01356' => 'bca', 'BcaC01g02034' => 'bca', 'BcaC01g06051' => 'bca', 'BcaC03g16839' => 'bca', 'BcaC03g17176' => 'bca', 'BcaC05g26829' => 'bca', 'BcaC06g31490' => 'bca', 'BcaC06g35344' => 'bca', 'BcaC06g36570' => 'bca', 'BcaC07g37537' => 'bca', 'BcaC08g43491' => 'bca', 'BcaC08g43773' => 'bca', 'BcaNung00234' => 'bca', 'BcaNung01982' => 'bca', 'BcaNung03707' => 'bca', 'BcaNung06454' => 'bca', 'BolC2t10762H' => 'bol', 'BolC2t11191H' => 'bol', 'BolC3t14322H' => 'bol', 'BolC3t19747H' => 'bol', 'BolC3t21425H' => 'bol', 'BolC4t27800H' => 'bol', 'BolC5t31423H' => 'bol', 'BolC6t35951H' => 'bol', 'BolC6t36282H' => 'bol', 'BolC7t40678H' => 'bol', 'BolC7t40679H' => 'bol', 'BolC7t42222H' => 'bol', 'BolC7t43492H' => 'bol', 'BolC7t46785H' => 'bol', 'BolC8t47853H' => 'bol', 'BolC9t56805H' => 'bol', 'BraA02t08000Z' => 'bra', 'BraA02t08341Z' => 'bra', 'BraA03t10936Z' => 'bra', 'BraA03t15657Z' => 'bra', 'BraA04t18100Z' => 'bra', 'BraA05t20523Z' => 'bra', 'BraA06t23353Z' => 'bra', 'BraA06t27473Z' => 'bra', 'BraA06t27769Z' => 'bra', 'BraA07t28928Z' => 'bra', 'BraA08t32236Z' => 'bra', 'BraA08t32841Z' => 'bra', 'BraA08t34524Z' => 'bra', 'BraA09t38742Z' => 'bra', 'BraA09t39295Z' => 'bra', 'C02p47180' => 'bna', 'C02p50990' => 'bna', 'C03p19360' => 'bna', 'C03p74950' => 'bna', 'C03p91000' => 'bna', 'C04p63260' => 'bna', 'C05p27050' => 'bna', 'C06p08750' => 'bna', 'C06p11490' => 'bna', 'C07p02820' => 'bna', 'C07p17180' => 'bna', 'C07p29440' => 'bna', 'C07p63730' => 'bna', 'C09p39260' => 'bna', 'CAN.G1164.34' => 'can', 'CAN.G1164.39' => 'can', 'CAN.G1530.3' => 'can', 'CAN.G162.61' => 'can', 'CAN.G176.6' => 'can', 'CAN.G289.49' => 'can', 'CAN.G370.21' => 'can', 'CAN.G370.22' => 'can', 'CAN.G371.117' => 'can', 'CAN.G58.37' => 'can', 'CAN.G588.98' => 'can', 'CANSAT21G2266' => 'cansat', 'CANSAT25G2799' => 'cansat', 'CANSAT35G0862' => 'cansat', 'CANSAT35G1704' => 'cansat', 'CANSAT35G1760' => 'cansat', 'CANSAT56G3971' => 'cansat', 'CANSAT56G4116' => 'cansat', 'CANSAT80G1259' => 'cansat', 'CARHR027730' => 'chi', 'CARHR033880' => 'chi', 'CARHR043270' => 'chi', 'CARHR145330' => 'chi', 'CARHR145340' => 'chi', 'CARHR175570' => 'chi', 'CARHR181570' => 'chi', 'CARHR258470' => 'chi', 'CARHR260490' => 'chi', 'CARHR294220' => 'chi', 'Carub.0001s2668' => 'cru', 'Carub.0001s3257' => 'cru', 'Carub.0001s4220' => 'cru', 'Carub.0005s0179' => 'cru', 'Carub.0006s2807' => 'cru', 'Carub.0007s0039' => 'cru', 'Carub.0008s0169' => 'cru', 'Carub.0008s0636' => 'cru', 'Ca_00338_v3' => 'car', 'Ca_00542_v3' => 'car', 'Ca_01844_v3' => 'car', 'Ca_10611_v3' => 'car', 'Ca_13326_v3' => 'car', 'Ca_17944_v3' => 'car', 'Ca_18546_v3' => 'car', 'Ca_24219_v3' => 'car', 'Ca_29972_v3' => 'car', 'CBR_g3681' => 'cbr', 'CBR_g40021' => 'cbr', 'Cc01_g08140' => 'ccan', 'Cc02_g13410' => 'ccan', 'Cc02_g37480' => 'ccan', 'Cc05_g12030' => 'ccan', 'Cc09_g03370' => 'ccan', 'Cc09_g10300' => 'ccan', 'Cc10_g03530' => 'ccan', 'Cc10_g11380' => 'ccan', 'CDE01G0176' => 'cde', 'CDE02G0675' => 'cde', 'CDE02G0942' => 'cde', 'CDE02G1153' => 'cde', 'CDE02G4177' => 'cde', 'CDE04G2117' => 'cde', 'CDE04G2736' => 'cde', 'CDE08G1161' => 'cde', 'CDE09G1238' => 'cde', 'Cfa000467' => 'cfa', 'Cfa000947' => 'cfa', 'Cfa004969' => 'cfa', 'Cfa005284' => 'cfa', 'Cfa008993' => 'cfa', 'Cfa018187' => 'cfa', 'Cfa018454' => 'cfa', 'Cfa020585' => 'cfa', 'Ciclev10000424m.g' => 'ccl', 'Ciclev10003605m.g' => 'ccl', 'Ciclev10007828m.g' => 'ccl', 'Ciclev10014620m.g' => 'ccl', 'Ciclev10015169m.g' => 'ccl', 'Ciclev10018291m.g' => 'ccl', 'Ciclev10028256m.g' => 'ccl', 'Ciclev10033822m.g' => 'ccl', 'CiPaw.05G060300' => 'cil', 'CiPaw.05G085000' => 'cil', 'CiPaw.06G083700' => 'cil', 'CiPaw.06G120300' => 'cil', 'CiPaw.09G060500' => 'cil', 'CiPaw.09G123800' => 'cil', 'CiPaw.11G169700' => 'cil', 'CiPaw.12G118300' => 'cil', 'CiPaw.15G071000' => 'cil', 'CiPaw.15G081900' => 'cil', 'ClCG01G024610' => 'cla', 'ClCG03G006070' => 'cla', 'ClCG05G019250' => 'cla', 'ClCG09G009500' => 'cla', 'ClCG11G008200' => 'cla', 'ClCG11G018080' => 'cla', 'COL.COLO4_17373' => 'col', 'COL.COLO4_22994' => 'col', 'COL.COLO4_26389' => 'col', 'COL.COLO4_27170' => 'col', 'COL.COLO4_31074' => 'col', 'COL.COLO4_31465' => 'col', 'COL.COLO4_36438' => 'col', 'COL.COLO4_36439' => 'col', 'Cpa.g.c38781' => 'cpa', 'Cpa.g.sc128.12' => 'cpa', 'Cpa.g.sc166.7' => 'cpa', 'Cpa.g.sc166.8' => 'cpa', 'Cpa.g.sc20.111' => 'cpa', 'Cpa.g.sc27.31' => 'cpa', 'Cpa.g.sc64.36' => 'cpa', 'Cpa.g.sc64.37' => 'cpa', 'Cpa.g.sc66.49' => 'cpa', 'Cpa.g.sc80.64' => 'cpa', 'CsaV3_1G012320' => 'csa', 'CsaV3_2G008480' => 'csa', 'CsaV3_2G033450' => 'csa', 'CsaV3_3G044830' => 'csa', 'CsaV3_4G033710' => 'csa', 'CsaV3_6G051730' => 'csa', 'CsaV3_7G025350' => 'csa', 'CSS0001067' => 'camsi', 'CSS0005996' => 'camsi', 'CSS0006590' => 'camsi', 'CSS0009673' => 'camsi', 'CSS0010201' => 'camsi', 'CSS0010549' => 'camsi', 'CSS0011364' => 'camsi', 'CSS0014473' => 'camsi', 'CSS0014961' => 'camsi', 'CSS0020191' => 'camsi', 'CSS0021165' => 'camsi', 'CSS0022306' => 'camsi', 'CSS0030591' => 'camsi', 'CSS0030696' => 'camsi', 'CSS0032653' => 'camsi', 'CSS0037487' => 'camsi', 'CSS0041102' => 'camsi', 'CSS0041261' => 'camsi', 'CSS0046246' => 'camsi', 'CSS0049256' => 'camsi', 'DCAR_004075' => 'dca', 'DCAR_011538' => 'dca', 'DCAR_019553' => 'dca', 'DCAR_020952' => 'dca', 'DCAR_021739' => 'dca', 'DCAR_027407' => 'dca', 'DCAR_027913' => 'dca', 'DCAR_028066' => 'dca', 'Dinv05899' => 'din', 'Dinv07563' => 'din', 'Dinv08010' => 'din', 'Dinv14125' => 'din', 'Dinv20172' => 'din', 'Dinv30743' => 'din', 'Dinv31229' => 'din', 'Dinv34162' => 'din', 'Dinv36028' => 'din', 'Dinv39368' => 'din', 'Dinv40565' => 'din', 'Dinv41706' => 'din', 'Duzib052G0089' => 'dzi', 'Duzib116G0641' => 'dzi', 'Duzib132G0069' => 'dzi', 'Duzib132G1219' => 'dzi', 'Duzib147G0278' => 'dzi', 'Duzib160G0480' => 'dzi', 'Duzib170G0661' => 'dzi', 'Duzib177G0591' => 'dzi', 'Duzib187G1353' => 'dzi', 'Duzib192G0858' => 'dzi', 'Duzib192G0883' => 'dzi', 'Duzib213G0506' => 'dzi', 'Duzib235G0289' => 'dzi', 'Duzib251G0422' => 'dzi', 'ECA232G3898' => 'eca', 'ECA233G5950' => 'eca', 'ECA234G1699' => 'eca', 'ECA234G2421' => 'eca', 'ECA236G0426' => 'eca', 'ECA236G4331' => 'eca', 'ECA248G2573' => 'eca', 'EL10Ac1g00077' => 'bvu', 'EL10Ac1g01746' => 'bvu', 'EL10Ac2g03464' => 'bvu', 'EL10Ac4g08176' => 'bvu', 'EL10Ac7g17521' => 'bvu', 'EL10Ac8g20386' => 'bvu', 'EL10Ac9g21343' => 'bvu', 'EL10Ac9g22688' => 'bvu', 'Eucgr.B03434' => 'egr', 'Eucgr.D00618' => 'egr', 'Eucgr.E02395' => 'egr', 'Eucgr.F01129' => 'egr', 'Eucgr.F02622' => 'egr', 'Eucgr.F04207' => 'egr', 'FAN01G0570' => 'fan', 'FAN03G3351' => 'fan', 'FAN06G3702' => 'fan', 'FAN07G2149' => 'fan', 'FAN10G3758' => 'fan', 'FAN11G1170' => 'fan', 'FAN11G2050' => 'fan', 'FAN11G2724' => 'fan', 'FAN12G1700' => 'fan', 'FAN12G2028' => 'fan', 'FAN15G1160' => 'fan', 'FAN15G3063' => 'fan', 'FAN16G2540' => 'fan', 'FAN16G3077' => 'fan', 'FAN16G3624' => 'fan', 'FAN17G0221' => 'fan', 'FAN20G2492' => 'fan', 'FAN20G2905' => 'fan', 'FAN21G0548' => 'fan', 'FAN21G1300' => 'fan', 'FAN22G0077' => 'fan', 'FAN22G1315' => 'fan', 'FAN24G1280' => 'fan', 'FAN24G1445' => 'fan', 'FAN24G3527' => 'fan', 'FAN25G0464' => 'fan', 'FAN25G2885' => 'fan', 'FAN25G3270' => 'fan', 'FAN27G1101' => 'fan', 'FAN27G2846' => 'fan', 'FAN27G3524' => 'fan', 'FvH4_2g11770' => 'fve', 'FvH4_2g15630' => 'fve', 'FvH4_3g05570' => 'fve', 'FvH4_3g09110' => 'fve', 'FvH4_3g19940' => 'fve', 'FvH4_4g04821' => 'fve', 'FvH4_4g31480' => 'fve', 'FvH4_7g01740' => 'fve', 'Glyma.05G130400' => 'gma', 'Glyma.05G156400' => 'gma', 'Glyma.07G197000' => 'gma', 'Glyma.08G085151' => 'gma', 'Glyma.08G114500' => 'gma', 'Glyma.08G300400' => 'gma', 'Glyma.10G215800' => 'gma', 'Glyma.12G224400' => 'gma', 'Glyma.13G179300' => 'gma', 'Glyma.13G218151' => 'gma', 'Glyma.13G238800' => 'gma', 'Glyma.13G276900' => 'gma', 'Glyma.14G078200' => 'gma', 'Glyma.15G074500' => 'gma', 'Glyma.15G094100' => 'gma', 'Glyma.17G247200' => 'gma', 'Glyma.18G120100' => 'gma', 'Glyma.20G176000' => 'gma', 'Gohir.A01G063600' => 'ghi', 'Gohir.A01G170301' => 'ghi', 'Gohir.A02G060500' => 'ghi', 'Gohir.A05G133850' => 'ghi', 'Gohir.A05G161400' => 'ghi', 'Gohir.A06G012900' => 'ghi', 'Gohir.A06G035901' => 'ghi', 'Gohir.A06G127100' => 'ghi', 'Gohir.A06G210500' => 'ghi', 'Gohir.A08G008650' => 'ghi', 'Gohir.A09G072700' => 'ghi', 'Gohir.A09G088301' => 'ghi', 'Gohir.A10G040600' => 'ghi', 'Gohir.A12G036300' => 'ghi', 'Gohir.A12G143350' => 'ghi', 'Gohir.A12G165500' => 'ghi', 'Gohir.A13G145700' => 'ghi', 'Gohir.D01G050000' => 'ghi', 'Gohir.D01G051366' => 'ghi', 'Gohir.D01G161350' => 'ghi', 'Gohir.D02G065900' => 'ghi', 'Gohir.D05G164200' => 'ghi', 'Gohir.D05G355500' => 'ghi', 'Gohir.D06G010400' => 'ghi', 'Gohir.D06G111250' => 'ghi', 'Gohir.D06G132000' => 'ghi', 'Gohir.D06G210500' => 'ghi', 'Gohir.D07G165675' => 'ghi', 'Gohir.D08G062240' => 'ghi', 'Gohir.D08G086101' => 'ghi', 'Gohir.D08G138060' => 'ghi', 'Gohir.D09G072300' => 'ghi', 'Gohir.D10G041400' => 'ghi', 'Gohir.D11G191020' => 'ghi', 'Gohir.D11G212066' => 'ghi', 'Gohir.D12G036300' => 'ghi', 'Gohir.D12G168600' => 'ghi', 'Gohir.D13G150600' => 'ghi', 'Gorai.001G057300' => 'gra', 'Gorai.002G069900' => 'gra', 'Gorai.002G200000' => 'gra', 'Gorai.003G067600' => 'gra', 'Gorai.005G074800' => 'gra', 'Gorai.006G087300' => 'gra', 'Gorai.008G037500' => 'gra', 'Gorai.008G181400' => 'gra', 'Gorai.009G169400' => 'gra', 'Gorai.009G387900' => 'gra', 'Gorai.010G013300' => 'gra', 'Gorai.010G153800' => 'gra', 'Gorai.010G255800' => 'gra', 'Gorai.011G043700' => 'gra', 'Gorai.011G198900' => 'gra', 'Gorai.013G168400' => 'gra', 'GSVIVG01005212001' => 'vvi', 'GSVIVG01006163001' => 'vvi', 'GSVIVG01009625001' => 'vvi', 'GSVIVG01014338001' => 'vvi', 'GSVIVG01020005001' => 'vvi', 'GSVIVG01021450001' => 'vvi', 'GSVIVG01023975001' => 'vvi', 'GSVIVG01034490001' => 'vvi', 'HanXRQChr04g0112071' => 'han', 'HanXRQChr05g0131151' => 'han', 'HanXRQChr09g0262371' => 'han', 'HanXRQChr09g0268401' => 'han', 'HanXRQChr10g0279241' => 'han', 'HanXRQChr10g0297961' => 'han', 'HanXRQChr11g0326231' => 'han', 'HanXRQChr11g0328471' => 'han', 'HanXRQChr16g0507941' => 'han', 'HanXRQChr17g0560211' => 'han', 'Haze_02108' => 'cav', 'Haze_02428' => 'cav', 'Haze_05593' => 'cav', 'Haze_06448' => 'cav', 'Haze_09427' => 'cav', 'Haze_12022' => 'cav', 'Haze_17612' => 'cav', 'Haze_17928' => 'cav', 'Hma1.2p1_0032F.1_g019250' => 'hma', 'Hma1.2p1_0163F.1_g072690' => 'hma', 'Hma1.2p1_0265F.1_g106710' => 'hma', 'Hma1.2p1_0286F.1_g113970' => 'hma', 'Hma1.2p1_0363F.1_g136640' => 'hma', 'Hma1.2p1_0584F.1_g183470' => 'hma', 'Hma1.2p1_0885F.1_g232570' => 'hma', 'HPP92_006022' => 'vpl', 'HPP92_007320' => 'vpl', 'HPP92_011521' => 'vpl', 'HPP92_019387' => 'vpl', 'HPP92_024038' => 'vpl', 'Hund05891' => 'sun', 'Hund06450' => 'sun', 'Hund12053' => 'sun', 'Hund16800' => 'sun', 'Hund21222' => 'sun', 'Hund22896' => 'sun', 'Hund23746' => 'sun', 'Hund27083' => 'sun', 'Lalb_Chr02g0141831' => 'lal', 'Lalb_Chr02g0141841' => 'lal', 'Lalb_Chr05g0220411' => 'lal', 'Lalb_Chr06g0162081' => 'lal', 'Lalb_Chr09g0327651' => 'lal', 'Lalb_Chr13g0295051' => 'lal', 'Lalb_Chr15g0086801' => 'lal', 'Lalb_Chr16g0383781' => 'lal', 'Lalb_Chr16g0383791' => 'lal', 'Lalb_Chr18g0055441' => 'lal', 'Lalb_Chr18g0059611' => 'lal', 'Lalb_Chr20g0109661' => 'lal', 'Lalb_Chr20g0109831' => 'lal', 'Lalb_Chr20g0121871' => 'lal', 'Lalb_Chr22g0355361' => 'lal', 'Lalb_Chr25g0286371' => 'lal', 'Lj1A1187G43' => 'lonja', 'Lj1A1205T50' => 'lonja', 'Lj1A800G33' => 'lonja', 'Lj1C1187T7' => 'lonja', 'Lj1C843T11' => 'lonja', 'Lj1g0010940' => 'lja', 'Lj2A288T69' => 'lonja', 'Lj3g0024276' => 'lja', 'Lj4A47T76' => 'lonja', 'Lj4g0005805' => 'lja', 'Lj4g0006097' => 'lja', 'Lj4g0008528' => 'lja', 'Lj4g0024907' => 'lja', 'Lj5g0012472' => 'lja', 'Lj5g0018648' => 'lja', 'Lj6C789G1' => 'lonja', 'Lj6g0004000' => 'lja', 'Lj7A292G67' => 'lonja', 'Lj7A292T64' => 'lonja', 'Lj9A400T58' => 'lonja', 'Lsat_1_v5_gn_1_126181' => 'lsa', 'Lsat_1_v5_gn_4_123041' => 'lsa', 'Lsat_1_v5_gn_4_133620' => 'lsa', 'Lsat_1_v5_gn_4_53221' => 'lsa', 'Lsat_1_v5_gn_4_71961' => 'lsa', 'Lsat_1_v5_gn_7_105241' => 'lsa', 'Lsat_1_v5_gn_7_21361' => 'lsa', 'Lsat_1_v5_gn_7_28860' => 'lsa', 'Lsat_1_v5_gn_7_31260' => 'lsa', 'Lsat_1_v5_gn_8_52801' => 'lsa', 'Manes.02G191400' => 'mes', 'Manes.03G110100' => 'mes', 'Manes.04G071100' => 'mes', 'Manes.05G100500' => 'mes', 'Manes.05G164700' => 'mes', 'Manes.15G087000' => 'mes', 'Manes.15G121500' => 'mes', 'Manes.16G028300' => 'mes', 'Manes.17G046100' => 'mes', 'Manes.17G069800' => 'mes', 'Manes.18G100500' => 'mes', 'Mapoly0002s0109' => 'mpo', 'Mapoly0024s0007' => 'mpo', 'Mapoly0089s0032' => 'mpo', 'MBI04_g42241_MAGBIO' => 'mbi', 'MBI05_g11988_MAGBIO' => 'mbi', 'MBI05_g35452_MAGBIO' => 'mbi', 'MBI07_g30179_MAGBIO' => 'mbi', 'MBI07_g35859_MAGBIO' => 'mbi', 'MBI07_g35860_MAGBIO' => 'mbi', 'MBI07_g37166_MAGBIO' => 'mbi', 'MBI08_g18172_MAGBIO' => 'mbi', 'MBI09_g08441_MAGBIO' => 'mbi', 'MBI13_g01676_MAGBIO' => 'mbi', 'MBI14_g42955_MAGBIO' => 'mbi', 'MBI16_g13161_MAGBIO' => 'mbi', 'MBI17_g27204_MAGBIO' => 'mbi', 'MBI19_g21595_MAGBIO' => 'mbi', 'MD00G1148400' => 'mdo', 'MD02G1301200' => 'mdo', 'MD03G1227800' => 'mdo', 'MD05G1041100' => 'mdo', 'MD05G1124800' => 'mdo', 'MD05G1284000' => 'mdo', 'MD05G1338800' => 'mdo', 'MD05G1338900' => 'mdo', 'MD07G1022800' => 'mdo', 'MD10G1047500' => 'mdo', 'MD10G1127500' => 'mdo', 'MD10G1262300' => 'mdo', 'MD10G1293800' => 'mdo', 'MD16G1074300' => 'mdo', 'Medtr1g021670' => 'mtr', 'Medtr1g096320' => 'mtr', 'Medtr2g013690' => 'mtr', 'Medtr2g019450' => 'mtr', 'Medtr2g085170' => 'mtr', 'Medtr4g088785' => 'mtr', 'Medtr8g055930' => 'mtr', 'Medtr8g085850' => 'mtr', 'MELO3C002605.2' => 'cme', 'MELO3C003891.2' => 'cme', 'MELO3C004012.2' => 'cme', 'MELO3C007134.2' => 'cme', 'MELO3C008118.2' => 'cme', 'MELO3C016700.2' => 'cme', 'MELO3C024127.2' => 'cme', 'MELO3C033361.2' => 'cme', 'MELO3C033362.2' => 'cme', 'Migut.C00430' => 'egut', 'Migut.C01246' => 'egut', 'Migut.E00101' => 'egut', 'Migut.H01486' => 'egut', 'Migut.H01939' => 'egut', 'Migut.K00360' => 'egut', 'Migut.M00910' => 'egut', 'Migut.M01139' => 'egut', 'Migut.N02677' => 'egut', 'MSTRG.13252' => 'ama', 'MSTRG.14701' => 'ama', 'MSTRG.1521' => 'ama', 'MSTRG.15884' => 'ama', 'MSTRG.16242' => 'ama', 'MSTRG.22285' => 'ama', 'MSTRG.22444' => 'ama', 'MSTRG.2349' => 'ama', 'MSTRG.26308' => 'ama', 'MSTRG.28296' => 'ama', 'MSTRG.9895' => 'ama', 'Nitab4.5_0000110g0060' => 'nta', 'Nitab4.5_0000420g0130' => 'nta', 'Nitab4.5_0000422g0030' => 'nta', 'Nitab4.5_0000560g0180' => 'nta', 'Nitab4.5_0000703g0100' => 'nta', 'Nitab4.5_0000786g0200' => 'nta', 'Nitab4.5_0001336g0020' => 'nta', 'Nitab4.5_0001796g0030' => 'nta', 'Nitab4.5_0003348g0060' => 'nta', 'Nitab4.5_0003698g0040' => 'nta', 'Nitab4.5_0003942g0090' => 'nta', 'Nitab4.5_0004775g0070' => 'nta', 'Nitab4.5_0004864g0030' => 'nta', 'Nitab4.5_0005615g0020' => 'nta', 'Nitab4.5_0009288g0030' => 'nta', 'Nitab4.5_0009341g0010' => 'nta', 'Nitab4.5_0009535g0010' => 'nta', 'Nn1g03995' => 'nnu', 'Nn1g04100' => 'nnu', 'Nn1g06530' => 'nnu', 'Nn3g16404' => 'nnu', 'Nn3g17212' => 'nnu', 'Nn3g20776' => 'nnu', 'Nn3g21923' => 'nnu', 'Nn5g27737' => 'nnu', 'Nn5g29461' => 'nnu', 'Nn7g38355' => 'nnu', 'Nn8g39873' => 'nnu', 'Oeu000548.2' => 'oeu', 'Oeu004672.1' => 'oeu', 'Oeu015605.2' => 'oeu', 'Oeu016092.1' => 'oeu', 'Oeu017879.3' => 'oeu', 'Oeu024910.1' => 'oeu', 'Oeu028965.1' => 'oeu', 'Oeu031269.1' => 'oeu', 'Oeu031270.1' => 'oeu', 'Oeu032535.1' => 'oeu', 'Oeu034151.1' => 'oeu', 'Oeu034152.1' => 'oeu', 'Oeu034588.2' => 'oeu', 'Oeu050846.1' => 'oeu', 'Oeu050849.2' => 'oeu', 'Oeu051063.2' => 'oeu', 'Oeu052368.1' => 'oeu', 'Oeu052370.1' => 'oeu', 'Os01g0210400' => 'osa', 'Os01g0304300' => 'osa', 'Os01g0749100' => 'osa', 'Os02g0745800' => 'osa', 'Os03g0769050' => 'osa', 'Os05g0531500' => 'osa', 'Os06g0724300' => 'osa', 'Os11g0198100' => 'osa', 'Peaxi162Scf00069g01425' => 'pax', 'Peaxi162Scf00280g00811' => 'pax', 'Peaxi162Scf00310g00615' => 'pax', 'Peaxi162Scf00362g00542' => 'pax', 'Peaxi162Scf00461g00310' => 'pax', 'Peaxi162Scf00530g00118' => 'pax', 'Peaxi162Scf00541g00057' => 'pax', 'Peaxi162Scf00661g00017' => 'pax', 'Peaxi162Scf00926g00027' => 'pax', 'Peaxi162Scf01064g00263' => 'pax', 'Peaxi162Scf01211g00135' => 'pax', 'PGR004G2336' => 'pgr', 'PGR042G0327' => 'pgr', 'PGR042G1957' => 'pgr', 'PGR042G2003' => 'pgr', 'PGR042G3929' => 'pgr', 'PGR083G1137' => 'pgr', 'PGR083G1364' => 'pgr', 'PGSC0003DMG400003381' => 'stu', 'PGSC0003DMG400003417' => 'stu', 'PGSC0003DMG400008981' => 'stu', 'PGSC0003DMG400012417' => 'stu', 'PGSC0003DMG400012823' => 'stu', 'PGSC0003DMG400016885' => 'stu', 'PGSC0003DMG400022812' => 'stu', 'PGSC0003DMG400029726' => 'stu', 'PGSC0003DMG401009243' => 'stu', 'PGSC0003DMG401031505' => 'stu', 'PGSC0003DMG402031505' => 'stu', 'Phvul.001G017600' => 'pvu', 'Phvul.002G193500' => 'pvu', 'Phvul.002G228900' => 'pvu', 'Phvul.002G236800' => 'pvu', 'Phvul.003G049500' => 'pvu', 'Phvul.005G072000' => 'pvu', 'Phvul.006G164800' => 'pvu', 'Phvul.006G185100' => 'pvu', 'Phvul.007G090000' => 'pvu', 'Potri.001G399800' => 'ptr', 'Potri.002G149900' => 'ptr', 'Potri.004G044100' => 'ptr', 'Potri.004G177600' => 'ptr', 'Potri.009G138000' => 'ptr', 'Potri.010G094000' => 'ptr', 'Potri.011G053000' => 'ptr', 'Potri.011G119300' => 'ptr', 'Potri.013G113700' => 'ptr', 'Potri.018G107800' => 'ptr', 'Potri.019G084100' => 'ptr', 'Pp3c14_23720' => 'ppa', 'Pp3c16_6340' => 'ppa', 'Pp3c23_13420' => 'ppa', 'Pp3c24_2740' => 'ppa', 'Pp3c25_860' => 'ppa', 'Pp3c8_21750' => 'ppa', 'Prupe.1G273000' => 'ppe', 'Prupe.1G273700' => 'ppe', 'Prupe.1G274100' => 'ppe', 'Prupe.2G023300' => 'ppe', 'Prupe.4G048000' => 'ppe', 'Prupe.4G080400' => 'ppe', 'Prupe.4G181200' => 'ppe', 'Prupe.8G056900' => 'ppe', 'Prupe.8G168700' => 'ppe', 'Psat1g189080' => 'psa', 'Psat1g204760' => 'psa', 'Psat4g175560' => 'psa', 'Psat4g177720' => 'psa', 'Psat5g244240' => 'psa', 'Psat6g010720' => 'psa', 'Psat6g187200' => 'psa', 'Psat7g072040' => 'psa', 'PSO017G3501' => 'pso', 'PSO063G2148' => 'pso', 'PSO063G5608' => 'pso', 'PSO210G6392' => 'pso', 'PSO541G2319' => 'pso', 'PSO541G2836' => 'pso', 'PSO541G4012' => 'pso', 'PSO541G6253' => 'pso', 'PSO675G0580' => 'pso', 'PSO675G0856' => 'pso', 'PSO675G5635' => 'pso', 'PSO675G9157' => 'pso', 'PSO832G1660' => 'pso', 'PSO832G1969' => 'pso', 'QL02p007186' => 'qlo', 'QL02p033904' => 'qlo', 'QL03p064391' => 'qlo', 'QL05p040593' => 'qlo', 'QL05p058242' => 'qlo', 'QL08p021825' => 'qlo', 'QL11p004981' => 'qlo', 'RcHm_v2.0_Chr1g0318301' => 'rch', 'RcHm_v2.0_Chr4g0418501' => 'rch', 'RcHm_v2.0_Chr4g0439971' => 'rch', 'RcHm_v2.0_Chr5g0008541' => 'rch', 'RcHm_v2.0_Chr5g0014101' => 'rch', 'RcHm_v2.0_Chr5g0014131' => 'rch', 'RcHm_v2.0_Chr5g0033621' => 'rch', 'RcHm_v2.0_Chr6g0272041' => 'rch', 'RcHm_v2.0_Chr6g0278831' => 'rch', 'Rhsim02G0130400' => 'rsi', 'Rhsim02G0171100' => 'rsi', 'Rhsim05G0053000' => 'rsi', 'Rhsim05G0053100' => 'rsi', 'Rhsim06G0096500' => 'rsi', 'Rhsim06G0096600' => 'rsi', 'Rhsim06G0199100' => 'rsi', 'Rhsim12G0062300' => 'rsi', 'Rhsim12G0062800' => 'rsi', 'Sabra02G0118600' => 'sbr', 'Sabra04G0027300' => 'sbr', 'Sabra04G0119500' => 'sbr', 'Sabra08G0112500' => 'sbr', 'Sabra11G0036800' => 'sbr', 'Sabra11G0103800' => 'sbr', 'Sabra13G0096300' => 'sbr', 'Sabra16G0262300' => 'sbr', 'Sabra18G0091700' => 'sbr', 'Sabra19G0095400' => 'sbr', 'SalBow6G3080' => 'sbo', 'SalBow7G1157' => 'sbo', 'SalBow7G2123' => 'sbo', 'SalBow7G2285' => 'sbo', 'SalBow7G3537' => 'sbo', 'SalBow8G2947' => 'sbo', 'SalBow8G4463' => 'sbo', 'SalBow8G5466' => 'sbo', 'Sc01g0001750' => 'sci', 'Sc02g0006640' => 'sci', 'Sc02g0006670' => 'sci', 'Sc04g0008220' => 'sci', 'Sc05g0006190' => 'sci', 'Sc08g0002760' => 'sci', 'Sc17g0006170' => 'sci', 'Sc22g0002050' => 'sci', 'Sc23g0001190' => 'sci', 'Sc24g0000980' => 'sci', 'Sed0006245' => 'sed', 'Sed0007543' => 'sed', 'Sed0009411' => 'sed', 'Sed0010765' => 'sed', 'Sed0012944' => 'sed', 'Sed0014682' => 'sed', 'Sed0016174' => 'sed', 'Sed0016796' => 'sed', 'Sed0020317' => 'sed', 'Sed0021467' => 'sed', 'SEGI_01316' => 'sgi', 'SEGI_03374' => 'sgi', 'SEGI_16265' => 'sgi', 'SEGI_18569' => 'sgi', 'SEGI_20351' => 'sgi', 'SEGI_26395' => 'sgi', 'SEGI_29469' => 'sgi', 'SEGI_34771' => 'sgi', 'SEGI_36769' => 'sgi', 'SEGI_37139' => 'sgi', 'SGA_v2.0_scaffold100G29687' => 'sas', 'SGA_v2.0_scaffold118G32472' => 'sas', 'SGA_v2.0_scaffold14G07051' => 'sas', 'SGA_v2.0_scaffold183G39845' => 'sas', 'SGA_v2.0_scaffold1G00174' => 'sas', 'SGA_v2.0_scaffold22G09714' => 'sas', 'SGA_v2.0_scaffold333G48992' => 'sas', 'SGA_v2.0_scaffold46G17491' => 'sas', 'SGA_v2.0_scaffold49G18294' => 'sas', 'SGA_v2.0_scaffold63G21658' => 'sas', 'SHI01741' => 'shi', 'SHI05771' => 'shi', 'SHI18077' => 'shi', 'SHI20525' => 'shi', 'SHI20527' => 'shi', 'SHI20528' => 'shi', 'SMO172G0185' => 'smo', 'SMO198G0020' => 'smo', 'SMO351G0006' => 'smo', 'SMO356G0118' => 'smo', 'SMO358G0296' => 'smo', 'SMO367G0079' => 'smo', 'SMO367G1277' => 'smo', 'Solyc01g014220.3' => 'sly', 'Solyc01g111770.2' => 'sly', 'Solyc02g078180.3' => 'sly', 'Solyc03g006430.3' => 'sly', 'Solyc03g006456.1' => 'sly', 'Solyc03g079860.2' => 'sly', 'Solyc04g079770.3' => 'sly', 'Solyc05g007430.4' => 'sly', 'Solyc07g063150.3' => 'sly', 'Solyc08g016620.3' => 'sly', 'Solyc09g057590.3' => 'sly', 'Solyc09g057600.1' => 'sly', 'Solyc10g009050.3' => 'sly', 'Solyc11g017420.2' => 'sly', 'Sopen01g053810' => 'spe', 'Sopen02g023040' => 'spe', 'Sopen03g002440' => 'spe', 'Sopen04g033350' => 'spe', 'Sopen05g003310' => 'spe', 'Sopen07g004050' => 'spe', 'Sopen07g031340' => 'spe', 'Sopen08g006990' => 'spe', 'Sopen10g004830' => 'spe', 'Sopen11g009370' => 'spe', 'Sp1g24450' => 'spa', 'Sp1g29670' => 'spa', 'Sp1g39600' => 'spa', 'Sp2g11080' => 'spa', 'Sp2g13970' => 'spa', 'Sp4g16130' => 'spa', 'Sp6g13080' => 'spa', 'Sp7g37270' => 'spa', 'TAR371G0065' => 'tar', 'TAR376G0340' => 'tar', 'TAR376G0435' => 'tar', 'TAR381G0002' => 'tar', 'TAR381G1236' => 'tar', 'TAR624G0055' => 'tar', 'TAR624G0324' => 'tar', 'TAR624G0696' => 'tar', 'TAR624G0906' => 'tar', 'TAR625G0107' => 'tar', 'TAR626G0015' => 'tar', 'TAR626G1356' => 'tar', 'TAR627G0888' => 'tar', 'TAR628G0399' => 'tar', 'TAR628G1327' => 'tar', 'TAR629G2831' => 'tar', 'TAR629G2874' => 'tar', 'TAR633G1432' => 'tar', 'TAR633G2771' => 'tar', 'THA.LOC104803394' => 'tha', 'THA.LOC104805153' => 'tha', 'THA.LOC104806784' => 'tha', 'THA.LOC104810473' => 'tha', 'THA.LOC104813100' => 'tha', 'THA.LOC104814215' => 'tha', 'THA.LOC104815554' => 'tha', 'THA.LOC104820544' => 'tha', 'THA.LOC104824754' => 'tha', 'THA.LOC104827717' => 'tha', 'Thecc.02G031400' => 'tca', 'Thecc.02G055900' => 'tca', 'Thecc.02G350800' => 'tca', 'Thecc.06G150900' => 'tca', 'Thecc.06G186600' => 'tca', 'Thecc.07G089600' => 'tca', 'Thecc.08G020400' => 'tca', 'Thecc.08G182100' => 'tca', 'Thhalv10000873m.g' => 'esa', 'Thhalv10004185m.g' => 'esa', 'Thhalv10006981m.g' => 'esa', 'Thhalv10007204m.g' => 'esa', 'Thhalv10011374m.g' => 'esa', 'Thhalv10013482m.g' => 'esa', 'Thhalv10017801m.g' => 'esa', 'Thhalv10024983m.g' => 'esa', 'TPR.G12072' => 'tpr', 'TPR.G15769' => 'tpr', 'TPR.G16504' => 'tpr', 'TPR.G16506' => 'tpr', 'TPR.G24345' => 'tpr', 'TPR.G26666' => 'tpr', 'TPR.G27320' => 'tpr', 'TPR.G31819' => 'tpr', 'TPR.G38879' => 'tpr', 'TPR.G39015' => 'tpr', 'TPR.G8819' => 'tpr', 'TWI09G0924' => 'twi', 'TWI12G0811' => 'twi', 'TWI12G1294' => 'twi', 'TWI31G0150' => 'twi', 'TWI36G1262' => 'twi', 'TWI38G1287' => 'twi', 'TWI38G1633' => 'twi', 'TWI38G1982' => 'twi', 'TWI39G0116' => 'twi', 'TWI60G1011' => 'twi', 'TWI63G0171' => 'twi', 'TWI73G0839' => 'twi', 'TWI79G1511' => 'twi', 'unitig_0.g915' => 'ugi', 'unitig_0.g916' => 'ugi', 'unitig_21.g20219' => 'ugi', 'unitig_21.g20416' => 'ugi', 'unitig_578.g16132' => 'ugi', 'unitig_578.g16718' => 'ugi', 'unitig_62.g23481' => 'ugi', 'unitig_744.g24535' => 'ugi', 'unitig_749.g13525' => 'ugi', 'vmacro01248' => 'vma', 'vmacro02290' => 'vma', 'vmacro10946' => 'vma', 'vmacro11865' => 'vma', 'vmacro12493' => 'vma', 'vmacro17322' => 'vma', 'vmacro21599' => 'vma', 'vmacro23041' => 'vma', 'VMungo0251G0004' => 'vmu', 'VMungo0251G2639' => 'vmu', 'VMungo0251G2967' => 'vmu', 'VMungo0540G0864' => 'vmu', 'VMungo0540G1569' => 'vmu', 'VMungo0647G0317' => 'vmu', 'VMungo0720G1373' => 'vmu', 'VMungo0720G1508' => 'vmu', 'VMungo1080G0485' => 'vmu', 'VMungo1215G3177' => 'vmu', 'Zm00001eb112600' => 'zma', 'Zm00001eb120220' => 'zma', 'Zm00001eb153240' => 'zma', 'Zm00001eb168880' => 'zma', 'Zm00001eb213920' => 'zma', 'Zm00001eb228280' => 'zma', 'Zm00001eb254580' => 'zma', 'Zm00001eb272180' => 'zma', 'Zm00001eb293190' => 'zma', 'Zm00001eb322930' => 'zma', 'Zm00001eb353360' => 'zma', 'Zm00001eb353390' => 'zma', 'Zm00001eb353430' => 'zma', 'Zm00001eb353440' => 'zma', 'Zm00001eb353780' => 'zma' ), 'gf_id' => 'HOM05D000499', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000499' ), 'data_identifier' => 'HOM05D000499', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000499', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1066', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p29780' => 'bna', 'A02p33180' => 'bna', 'A03p16470' => 'bna', 'A03p66010' => 'bna', 'A04p25970' => 'bna', 'A06p01270' => 'bna', 'A06p46080' => 'bna', 'A07p11400' => 'bna', 'A08p01840' => 'bna', 'A08p08230' => 'bna', 'A08p25740' => 'bna', 'A09p32070' => 'bna', 'A09p37830' => 'bna', 'A09p42840' => 'bna', 'A09p42850' => 'bna', 'Aa31LG10G2060' => 'aar', 'Aa31LG2G7410' => 'aar', 'Aa31LG6G10200' => 'aar', 'Aa31LG6G16680' => 'aar', 'Aa31LG6G8470' => 'aar', 'Aa31LG9G12730' => 'aar', 'Aa31LG9G13680' => 'aar', 'Aa31LG9G14920' => 'aar', 'Aa31LG9G6650' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4977' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5467' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3254' => 'aag', 'Actinidia02578' => 'ach', 'Actinidia07693' => 'ach', 'Actinidia08413' => 'ach', 'Actinidia08414' => 'ach', 'Actinidia15289' => 'ach', 'Actinidia19871' => 'ach', 'Actinidia21475' => 'ach', 'Actinidia22576' => 'ach', 'Actinidia28327' => 'ach', 'Actinidia32491' => 'ach', 'Actinidia39463' => 'ach', 'Actinidia39571' => 'ach', 'Ah.01g013750' => 'amhyb', 'Ah.01g023210' => 'amhyb', 'Ah.04g164850' => 'amhyb', 'Ah.05g178060' => 'amhyb', 'Ah.07g204270' => 'amhyb', 'Ah.07g208480' => 'amhyb', 'Ah.09g237410' => 'amhyb', 'Ah.14g089460' => 'amhyb', 'AL1G41790' => 'aly', 'AL1G49050' => 'aly', 'AL1G53810' => 'aly', 'AL1G61400' => 'aly', 'AL4G18580' => 'aly', 'AL5G12510' => 'aly', 'AL5G12540' => 'aly', 'AL6G43230' => 'aly', 'AL7G10370' => 'aly', 'AL7G19250' => 'aly', 'AL8G12240' => 'aly', 'AL8G18540' => 'aly', 'Aqoxy1G02409' => 'aox', 'Aqoxy2G03993' => 'aox', 'Aqoxy3G03357' => 'aox', 'Aqoxy4G00785' => 'aox', 'Aqoxy5G02598' => 'aox', 'Aqoxy6G00132' => 'aox', 'Aqoxy7G01776' => 'aox', 'Aqoxy7G02316' => 'aox', 'Aqoxy7G03973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.12AFKW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B8730' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27IQR1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3F75VG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3RE0GA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41TCQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.527VTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FIR39' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5W8UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DA38EV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ63HS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H1I32C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HC27T5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4M8AP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7N3CZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9UVDZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LS1NQA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT1D4B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SKC4TM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCFV76' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF9Q1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQWD9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1ZM88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WE07RT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YCK7VH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJE6Q6' => 'arhy', 'AT1G28240' => 'ath', 'AT1G34550' => 'ath', 'AT1G53040' => 'ath', 'AT2G02910' => 'ath', 'AT4G09630' => 'ath', 'AT4G38500' => 'ath', 'AT5G42660' => 'ath', 'AT5G46220' => 'ath', 'ATR0152G026' => 'atr', 'ATR0564G343' => 'atr', 'ATR0706G151' => 'atr', 'ATR0733G207' => 'atr', 'ATR0751G234' => 'atr', 'ATR0807G048' => 'atr', 'ATR1091G084' => 'atr', 'Atru.chr10.1229' => 'acertr', 'Atru.chr10.1230' => 'acertr', 'Atru.chr10.1874' => 'acertr', 'Atru.chr11.1808' => 'acertr', 'Atru.chr13.1795' => 'acertr', 'Atru.chr13.570' => 'acertr', 'Atru.chr2.2608' => 'acertr', 'Atru.chr2.2609' => 'acertr', 'Atru.chr5.3428' => 'acertr', 'Atru.chr8.1171' => 'acertr', 'AUR62004651' => 'cqu', 'AUR62008675' => 'cqu', 'AUR62010014' => 'cqu', 'AUR62013004' => 'cqu', 'AUR62014825' => 'cqu', 'AUR62015015' => 'cqu', 'AUR62015151' => 'cqu', 'AUR62017020' => 'cqu', 'AUR62019422' => 'cqu', 'AUR62023570' => 'cqu', 'AUR62025571' => 'cqu', 'AUR62029098' => 'cqu', 'AUR62033863' => 'cqu', 'AUR62034296' => 'cqu', 'AUR62040075' => 'cqu', 'BcaB02g07334' => 'bca', 'BcaB02g10575' => 'bca', 'BcaB03g12119' => 'bca', 'BcaB03g12120' => 'bca', 'BcaB03g13945' => 'bca', 'BcaB04g17123' => 'bca', 'BcaB04g17867' => 'bca', 'BcaB04g19839' => 'bca', 'BcaB07g30317' => 'bca', 'BcaB07g32432' => 'bca', 'BcaB07g33362' => 'bca', 'BcaB08g36611' => 'bca', 'BcaC01g00028' => 'bca', 'BcaC01g01356' => 'bca', 'BcaC01g02034' => 'bca', 'BcaC01g06051' => 'bca', 'BcaC03g16839' => 'bca', 'BcaC03g17176' => 'bca', 'BcaC05g26829' => 'bca', 'BcaC06g31490' => 'bca', 'BcaC06g35344' => 'bca', 'BcaC06g36570' => 'bca', 'BcaC07g37537' => 'bca', 'BcaC08g43491' => 'bca', 'BcaC08g43773' => 'bca', 'BcaNung00234' => 'bca', 'BcaNung01982' => 'bca', 'BcaNung03707' => 'bca', 'BcaNung06454' => 'bca', 'BolC2t10762H' => 'bol', 'BolC2t11191H' => 'bol', 'BolC3t14322H' => 'bol', 'BolC3t19747H' => 'bol', 'BolC3t21425H' => 'bol', 'BolC4t27800H' => 'bol', 'BolC5t31423H' => 'bol', 'BolC6t35951H' => 'bol', 'BolC6t36282H' => 'bol', 'BolC7t40678H' => 'bol', 'BolC7t40679H' => 'bol', 'BolC7t42222H' => 'bol', 'BolC7t43492H' => 'bol', 'BolC7t46785H' => 'bol', 'BolC8t47853H' => 'bol', 'BolC9t56805H' => 'bol', 'BraA02t08000Z' => 'bra', 'BraA02t08341Z' => 'bra', 'BraA03t10936Z' => 'bra', 'BraA03t15657Z' => 'bra', 'BraA04t18100Z' => 'bra', 'BraA05t20523Z' => 'bra', 'BraA06t23353Z' => 'bra', 'BraA06t27473Z' => 'bra', 'BraA06t27769Z' => 'bra', 'BraA07t28928Z' => 'bra', 'BraA08t32236Z' => 'bra', 'BraA08t32841Z' => 'bra', 'BraA08t34524Z' => 'bra', 'BraA09t38742Z' => 'bra', 'BraA09t39295Z' => 'bra', 'C02p47180' => 'bna', 'C02p50990' => 'bna', 'C03p19360' => 'bna', 'C03p74950' => 'bna', 'C03p91000' => 'bna', 'C04p63260' => 'bna', 'C05p27050' => 'bna', 'C06p08750' => 'bna', 'C06p11490' => 'bna', 'C07p02820' => 'bna', 'C07p17180' => 'bna', 'C07p29440' => 'bna', 'C07p63730' => 'bna', 'C09p39260' => 'bna', 'CAN.G1164.34' => 'can', 'CAN.G1164.39' => 'can', 'CAN.G1530.3' => 'can', 'CAN.G162.61' => 'can', 'CAN.G176.6' => 'can', 'CAN.G289.49' => 'can', 'CAN.G370.21' => 'can', 'CAN.G370.22' => 'can', 'CAN.G371.117' => 'can', 'CAN.G58.37' => 'can', 'CAN.G588.98' => 'can', 'CANSAT21G2266' => 'cansat', 'CANSAT25G2799' => 'cansat', 'CANSAT35G0862' => 'cansat', 'CANSAT35G1704' => 'cansat', 'CANSAT35G1760' => 'cansat', 'CANSAT56G3971' => 'cansat', 'CANSAT56G4116' => 'cansat', 'CANSAT80G1259' => 'cansat', 'CARHR027730' => 'chi', 'CARHR033880' => 'chi', 'CARHR043270' => 'chi', 'CARHR145330' => 'chi', 'CARHR145340' => 'chi', 'CARHR175570' => 'chi', 'CARHR181570' => 'chi', 'CARHR258470' => 'chi', 'CARHR260490' => 'chi', 'CARHR294220' => 'chi', 'Carub.0001s2668' => 'cru', 'Carub.0001s3257' => 'cru', 'Carub.0001s4220' => 'cru', 'Carub.0005s0179' => 'cru', 'Carub.0006s2807' => 'cru', 'Carub.0007s0039' => 'cru', 'Carub.0008s0169' => 'cru', 'Carub.0008s0636' => 'cru', 'Ca_00338_v3' => 'car', 'Ca_00542_v3' => 'car', 'Ca_01844_v3' => 'car', 'Ca_10611_v3' => 'car', 'Ca_13326_v3' => 'car', 'Ca_17944_v3' => 'car', 'Ca_18546_v3' => 'car', 'Ca_24219_v3' => 'car', 'Ca_29972_v3' => 'car', 'CBR_g3681' => 'cbr', 'CBR_g40021' => 'cbr', 'Cc01_g08140' => 'ccan', 'Cc02_g13410' => 'ccan', 'Cc02_g37480' => 'ccan', 'Cc05_g12030' => 'ccan', 'Cc09_g03370' => 'ccan', 'Cc09_g10300' => 'ccan', 'Cc10_g03530' => 'ccan', 'Cc10_g11380' => 'ccan', 'CDE01G0176' => 'cde', 'CDE02G0675' => 'cde', 'CDE02G0942' => 'cde', 'CDE02G1153' => 'cde', 'CDE02G4177' => 'cde', 'CDE04G2117' => 'cde', 'CDE04G2736' => 'cde', 'CDE08G1161' => 'cde', 'CDE09G1238' => 'cde', 'Cfa000467' => 'cfa', 'Cfa000947' => 'cfa', 'Cfa004969' => 'cfa', 'Cfa005284' => 'cfa', 'Cfa008993' => 'cfa', 'Cfa018187' => 'cfa', 'Cfa018454' => 'cfa', 'Cfa020585' => 'cfa', 'Ciclev10000424m.g' => 'ccl', 'Ciclev10003605m.g' => 'ccl', 'Ciclev10007828m.g' => 'ccl', 'Ciclev10014620m.g' => 'ccl', 'Ciclev10015169m.g' => 'ccl', 'Ciclev10018291m.g' => 'ccl', 'Ciclev10028256m.g' => 'ccl', 'Ciclev10033822m.g' => 'ccl', 'CiPaw.05G060300' => 'cil', 'CiPaw.05G085000' => 'cil', 'CiPaw.06G083700' => 'cil', 'CiPaw.06G120300' => 'cil', 'CiPaw.09G060500' => 'cil', 'CiPaw.09G123800' => 'cil', 'CiPaw.11G169700' => 'cil', 'CiPaw.12G118300' => 'cil', 'CiPaw.15G071000' => 'cil', 'CiPaw.15G081900' => 'cil', 'ClCG01G024610' => 'cla', 'ClCG03G006070' => 'cla', 'ClCG05G019250' => 'cla', 'ClCG09G009500' => 'cla', 'ClCG11G008200' => 'cla', 'ClCG11G018080' => 'cla', 'COL.COLO4_17373' => 'col', 'COL.COLO4_22994' => 'col', 'COL.COLO4_26389' => 'col', 'COL.COLO4_27170' => 'col', 'COL.COLO4_31074' => 'col', 'COL.COLO4_31465' => 'col', 'COL.COLO4_36438' => 'col', 'COL.COLO4_36439' => 'col', 'Cpa.g.c38781' => 'cpa', 'Cpa.g.sc128.12' => 'cpa', 'Cpa.g.sc166.7' => 'cpa', 'Cpa.g.sc166.8' => 'cpa', 'Cpa.g.sc20.111' => 'cpa', 'Cpa.g.sc27.31' => 'cpa', 'Cpa.g.sc64.36' => 'cpa', 'Cpa.g.sc64.37' => 'cpa', 'Cpa.g.sc66.49' => 'cpa', 'Cpa.g.sc80.64' => 'cpa', 'CsaV3_1G012320' => 'csa', 'CsaV3_2G008480' => 'csa', 'CsaV3_2G033450' => 'csa', 'CsaV3_3G044830' => 'csa', 'CsaV3_4G033710' => 'csa', 'CsaV3_6G051730' => 'csa', 'CsaV3_7G025350' => 'csa', 'CSS0001067' => 'camsi', 'CSS0005996' => 'camsi', 'CSS0006590' => 'camsi', 'CSS0009673' => 'camsi', 'CSS0010201' => 'camsi', 'CSS0010549' => 'camsi', 'CSS0011364' => 'camsi', 'CSS0014473' => 'camsi', 'CSS0014961' => 'camsi', 'CSS0020191' => 'camsi', 'CSS0021165' => 'camsi', 'CSS0022306' => 'camsi', 'CSS0030591' => 'camsi', 'CSS0030696' => 'camsi', 'CSS0032653' => 'camsi', 'CSS0037487' => 'camsi', 'CSS0041102' => 'camsi', 'CSS0041261' => 'camsi', 'CSS0046246' => 'camsi', 'CSS0049256' => 'camsi', 'DCAR_004075' => 'dca', 'DCAR_011538' => 'dca', 'DCAR_019553' => 'dca', 'DCAR_020952' => 'dca', 'DCAR_021739' => 'dca', 'DCAR_027407' => 'dca', 'DCAR_027913' => 'dca', 'DCAR_028066' => 'dca', 'Dinv05899' => 'din', 'Dinv07563' => 'din', 'Dinv08010' => 'din', 'Dinv14125' => 'din', 'Dinv20172' => 'din', 'Dinv30743' => 'din', 'Dinv31229' => 'din', 'Dinv34162' => 'din', 'Dinv36028' => 'din', 'Dinv39368' => 'din', 'Dinv40565' => 'din', 'Dinv41706' => 'din', 'Duzib052G0089' => 'dzi', 'Duzib116G0641' => 'dzi', 'Duzib132G0069' => 'dzi', 'Duzib132G1219' => 'dzi', 'Duzib147G0278' => 'dzi', 'Duzib160G0480' => 'dzi', 'Duzib170G0661' => 'dzi', 'Duzib177G0591' => 'dzi', 'Duzib187G1353' => 'dzi', 'Duzib192G0858' => 'dzi', 'Duzib192G0883' => 'dzi', 'Duzib213G0506' => 'dzi', 'Duzib235G0289' => 'dzi', 'Duzib251G0422' => 'dzi', 'ECA232G3898' => 'eca', 'ECA233G5950' => 'eca', 'ECA234G1699' => 'eca', 'ECA234G2421' => 'eca', 'ECA236G0426' => 'eca', 'ECA236G4331' => 'eca', 'ECA248G2573' => 'eca', 'EL10Ac1g00077' => 'bvu', 'EL10Ac1g01746' => 'bvu', 'EL10Ac2g03464' => 'bvu', 'EL10Ac4g08176' => 'bvu', 'EL10Ac7g17521' => 'bvu', 'EL10Ac8g20386' => 'bvu', 'EL10Ac9g21343' => 'bvu', 'EL10Ac9g22688' => 'bvu', 'Eucgr.B03434' => 'egr', 'Eucgr.D00618' => 'egr', 'Eucgr.E02395' => 'egr', 'Eucgr.F01129' => 'egr', 'Eucgr.F02622' => 'egr', 'Eucgr.F04207' => 'egr', 'FAN01G0570' => 'fan', 'FAN03G3351' => 'fan', 'FAN06G3702' => 'fan', 'FAN07G2149' => 'fan', 'FAN10G3758' => 'fan', 'FAN11G1170' => 'fan', 'FAN11G2050' => 'fan', 'FAN11G2724' => 'fan', 'FAN12G1700' => 'fan', 'FAN12G2028' => 'fan', 'FAN15G1160' => 'fan', 'FAN15G3063' => 'fan', 'FAN16G2540' => 'fan', 'FAN16G3077' => 'fan', 'FAN16G3624' => 'fan', 'FAN17G0221' => 'fan', 'FAN20G2492' => 'fan', 'FAN20G2905' => 'fan', 'FAN21G0548' => 'fan', 'FAN21G1300' => 'fan', 'FAN22G0077' => 'fan', 'FAN22G1315' => 'fan', 'FAN24G1280' => 'fan', 'FAN24G1445' => 'fan', 'FAN24G3527' => 'fan', 'FAN25G0464' => 'fan', 'FAN25G2885' => 'fan', 'FAN25G3270' => 'fan', 'FAN27G1101' => 'fan', 'FAN27G2846' => 'fan', 'FAN27G3524' => 'fan', 'FvH4_2g11770' => 'fve', 'FvH4_2g15630' => 'fve', 'FvH4_3g05570' => 'fve', 'FvH4_3g09110' => 'fve', 'FvH4_3g19940' => 'fve', 'FvH4_4g04821' => 'fve', 'FvH4_4g31480' => 'fve', 'FvH4_7g01740' => 'fve', 'Glyma.05G130400' => 'gma', 'Glyma.05G156400' => 'gma', 'Glyma.07G197000' => 'gma', 'Glyma.08G085151' => 'gma', 'Glyma.08G114500' => 'gma', 'Glyma.08G300400' => 'gma', 'Glyma.10G215800' => 'gma', 'Glyma.12G224400' => 'gma', 'Glyma.13G179300' => 'gma', 'Glyma.13G218151' => 'gma', 'Glyma.13G238800' => 'gma', 'Glyma.13G276900' => 'gma', 'Glyma.14G078200' => 'gma', 'Glyma.15G074500' => 'gma', 'Glyma.15G094100' => 'gma', 'Glyma.17G247200' => 'gma', 'Glyma.18G120100' => 'gma', 'Glyma.20G176000' => 'gma', 'Gohir.A01G063600' => 'ghi', 'Gohir.A01G170301' => 'ghi', 'Gohir.A02G060500' => 'ghi', 'Gohir.A05G133850' => 'ghi', 'Gohir.A05G161400' => 'ghi', 'Gohir.A06G012900' => 'ghi', 'Gohir.A06G035901' => 'ghi', 'Gohir.A06G127100' => 'ghi', 'Gohir.A06G210500' => 'ghi', 'Gohir.A08G008650' => 'ghi', 'Gohir.A09G072700' => 'ghi', 'Gohir.A09G088301' => 'ghi', 'Gohir.A10G040600' => 'ghi', 'Gohir.A12G036300' => 'ghi', 'Gohir.A12G143350' => 'ghi', 'Gohir.A12G165500' => 'ghi', 'Gohir.A13G145700' => 'ghi', 'Gohir.D01G050000' => 'ghi', 'Gohir.D01G051366' => 'ghi', 'Gohir.D01G161350' => 'ghi', 'Gohir.D02G065900' => 'ghi', 'Gohir.D05G164200' => 'ghi', 'Gohir.D05G355500' => 'ghi', 'Gohir.D06G010400' => 'ghi', 'Gohir.D06G111250' => 'ghi', 'Gohir.D06G132000' => 'ghi', 'Gohir.D06G210500' => 'ghi', 'Gohir.D07G165675' => 'ghi', 'Gohir.D08G062240' => 'ghi', 'Gohir.D08G086101' => 'ghi', 'Gohir.D08G138060' => 'ghi', 'Gohir.D09G072300' => 'ghi', 'Gohir.D10G041400' => 'ghi', 'Gohir.D11G191020' => 'ghi', 'Gohir.D11G212066' => 'ghi', 'Gohir.D12G036300' => 'ghi', 'Gohir.D12G168600' => 'ghi', 'Gohir.D13G150600' => 'ghi', 'Gorai.001G057300' => 'gra', 'Gorai.002G069900' => 'gra', 'Gorai.002G200000' => 'gra', 'Gorai.003G067600' => 'gra', 'Gorai.005G074800' => 'gra', 'Gorai.006G087300' => 'gra', 'Gorai.008G037500' => 'gra', 'Gorai.008G181400' => 'gra', 'Gorai.009G169400' => 'gra', 'Gorai.009G387900' => 'gra', 'Gorai.010G013300' => 'gra', 'Gorai.010G153800' => 'gra', 'Gorai.010G255800' => 'gra', 'Gorai.011G043700' => 'gra', 'Gorai.011G198900' => 'gra', 'Gorai.013G168400' => 'gra', 'GSVIVG01005212001' => 'vvi', 'GSVIVG01006163001' => 'vvi', 'GSVIVG01009625001' => 'vvi', 'GSVIVG01014338001' => 'vvi', 'GSVIVG01020005001' => 'vvi', 'GSVIVG01021450001' => 'vvi', 'GSVIVG01023975001' => 'vvi', 'GSVIVG01034490001' => 'vvi', 'HanXRQChr04g0112071' => 'han', 'HanXRQChr05g0131151' => 'han', 'HanXRQChr09g0262371' => 'han', 'HanXRQChr09g0268401' => 'han', 'HanXRQChr10g0279241' => 'han', 'HanXRQChr10g0297961' => 'han', 'HanXRQChr11g0326231' => 'han', 'HanXRQChr11g0328471' => 'han', 'HanXRQChr16g0507941' => 'han', 'HanXRQChr17g0560211' => 'han', 'Haze_02108' => 'cav', 'Haze_02428' => 'cav', 'Haze_05593' => 'cav', 'Haze_06448' => 'cav', 'Haze_09427' => 'cav', 'Haze_12022' => 'cav', 'Haze_17612' => 'cav', 'Haze_17928' => 'cav', 'Hma1.2p1_0032F.1_g019250' => 'hma', 'Hma1.2p1_0163F.1_g072690' => 'hma', 'Hma1.2p1_0265F.1_g106710' => 'hma', 'Hma1.2p1_0286F.1_g113970' => 'hma', 'Hma1.2p1_0363F.1_g136640' => 'hma', 'Hma1.2p1_0584F.1_g183470' => 'hma', 'Hma1.2p1_0885F.1_g232570' => 'hma', 'HPP92_006022' => 'vpl', 'HPP92_007320' => 'vpl', 'HPP92_011521' => 'vpl', 'HPP92_019387' => 'vpl', 'HPP92_024038' => 'vpl', 'Hund05891' => 'sun', 'Hund06450' => 'sun', 'Hund12053' => 'sun', 'Hund16800' => 'sun', 'Hund21222' => 'sun', 'Hund22896' => 'sun', 'Hund23746' => 'sun', 'Hund27083' => 'sun', 'Lalb_Chr02g0141831' => 'lal', 'Lalb_Chr02g0141841' => 'lal', 'Lalb_Chr05g0220411' => 'lal', 'Lalb_Chr06g0162081' => 'lal', 'Lalb_Chr09g0327651' => 'lal', 'Lalb_Chr13g0295051' => 'lal', 'Lalb_Chr15g0086801' => 'lal', 'Lalb_Chr16g0383781' => 'lal', 'Lalb_Chr16g0383791' => 'lal', 'Lalb_Chr18g0055441' => 'lal', 'Lalb_Chr18g0059611' => 'lal', 'Lalb_Chr20g0109661' => 'lal', 'Lalb_Chr20g0109831' => 'lal', 'Lalb_Chr20g0121871' => 'lal', 'Lalb_Chr22g0355361' => 'lal', 'Lalb_Chr25g0286371' => 'lal', 'Lj1A1187G43' => 'lonja', 'Lj1A1205T50' => 'lonja', 'Lj1A800G33' => 'lonja', 'Lj1C1187T7' => 'lonja', 'Lj1C843T11' => 'lonja', 'Lj1g0010940' => 'lja', 'Lj2A288T69' => 'lonja', 'Lj3g0024276' => 'lja', 'Lj4A47T76' => 'lonja', 'Lj4g0005805' => 'lja', 'Lj4g0006097' => 'lja', 'Lj4g0008528' => 'lja', 'Lj4g0024907' => 'lja', 'Lj5g0012472' => 'lja', 'Lj5g0018648' => 'lja', 'Lj6C789G1' => 'lonja', 'Lj6g0004000' => 'lja', 'Lj7A292G67' => 'lonja', 'Lj7A292T64' => 'lonja', 'Lj9A400T58' => 'lonja', 'Lsat_1_v5_gn_1_126181' => 'lsa', 'Lsat_1_v5_gn_4_123041' => 'lsa', 'Lsat_1_v5_gn_4_133620' => 'lsa', 'Lsat_1_v5_gn_4_53221' => 'lsa', 'Lsat_1_v5_gn_4_71961' => 'lsa', 'Lsat_1_v5_gn_7_105241' => 'lsa', 'Lsat_1_v5_gn_7_21361' => 'lsa', 'Lsat_1_v5_gn_7_28860' => 'lsa', 'Lsat_1_v5_gn_7_31260' => 'lsa', 'Lsat_1_v5_gn_8_52801' => 'lsa', 'Manes.02G191400' => 'mes', 'Manes.03G110100' => 'mes', 'Manes.04G071100' => 'mes', 'Manes.05G100500' => 'mes', 'Manes.05G164700' => 'mes', 'Manes.15G087000' => 'mes', 'Manes.15G121500' => 'mes', 'Manes.16G028300' => 'mes', 'Manes.17G046100' => 'mes', 'Manes.17G069800' => 'mes', 'Manes.18G100500' => 'mes', 'Mapoly0002s0109' => 'mpo', 'Mapoly0024s0007' => 'mpo', 'Mapoly0089s0032' => 'mpo', 'MBI04_g42241_MAGBIO' => 'mbi', 'MBI05_g11988_MAGBIO' => 'mbi', 'MBI05_g35452_MAGBIO' => 'mbi', 'MBI07_g30179_MAGBIO' => 'mbi', 'MBI07_g35859_MAGBIO' => 'mbi', 'MBI07_g35860_MAGBIO' => 'mbi', 'MBI07_g37166_MAGBIO' => 'mbi', 'MBI08_g18172_MAGBIO' => 'mbi', 'MBI09_g08441_MAGBIO' => 'mbi', 'MBI13_g01676_MAGBIO' => 'mbi', 'MBI14_g42955_MAGBIO' => 'mbi', 'MBI16_g13161_MAGBIO' => 'mbi', 'MBI17_g27204_MAGBIO' => 'mbi', 'MBI19_g21595_MAGBIO' => 'mbi', 'MD00G1148400' => 'mdo', 'MD02G1301200' => 'mdo', 'MD03G1227800' => 'mdo', 'MD05G1041100' => 'mdo', 'MD05G1124800' => 'mdo', 'MD05G1284000' => 'mdo', 'MD05G1338800' => 'mdo', 'MD05G1338900' => 'mdo', 'MD07G1022800' => 'mdo', 'MD10G1047500' => 'mdo', 'MD10G1127500' => 'mdo', 'MD10G1262300' => 'mdo', 'MD10G1293800' => 'mdo', 'MD16G1074300' => 'mdo', 'Medtr1g021670' => 'mtr', 'Medtr1g096320' => 'mtr', 'Medtr2g013690' => 'mtr', 'Medtr2g019450' => 'mtr', 'Medtr2g085170' => 'mtr', 'Medtr4g088785' => 'mtr', 'Medtr8g055930' => 'mtr', 'Medtr8g085850' => 'mtr', 'MELO3C002605.2' => 'cme', 'MELO3C003891.2' => 'cme', 'MELO3C004012.2' => 'cme', 'MELO3C007134.2' => 'cme', 'MELO3C008118.2' => 'cme', 'MELO3C016700.2' => 'cme', 'MELO3C024127.2' => 'cme', 'MELO3C033361.2' => 'cme', 'MELO3C033362.2' => 'cme', 'Migut.C00430' => 'egut', 'Migut.C01246' => 'egut', 'Migut.E00101' => 'egut', 'Migut.H01486' => 'egut', 'Migut.H01939' => 'egut', 'Migut.K00360' => 'egut', 'Migut.M00910' => 'egut', 'Migut.M01139' => 'egut', 'Migut.N02677' => 'egut', 'MSTRG.13252' => 'ama', 'MSTRG.14701' => 'ama', 'MSTRG.1521' => 'ama', 'MSTRG.15884' => 'ama', 'MSTRG.16242' => 'ama', 'MSTRG.22285' => 'ama', 'MSTRG.22444' => 'ama', 'MSTRG.2349' => 'ama', 'MSTRG.26308' => 'ama', 'MSTRG.28296' => 'ama', 'MSTRG.9895' => 'ama', 'Nitab4.5_0000110g0060' => 'nta', 'Nitab4.5_0000420g0130' => 'nta', 'Nitab4.5_0000422g0030' => 'nta', 'Nitab4.5_0000560g0180' => 'nta', 'Nitab4.5_0000703g0100' => 'nta', 'Nitab4.5_0000786g0200' => 'nta', 'Nitab4.5_0001336g0020' => 'nta', 'Nitab4.5_0001796g0030' => 'nta', 'Nitab4.5_0003348g0060' => 'nta', 'Nitab4.5_0003698g0040' => 'nta', 'Nitab4.5_0003942g0090' => 'nta', 'Nitab4.5_0004775g0070' => 'nta', 'Nitab4.5_0004864g0030' => 'nta', 'Nitab4.5_0005615g0020' => 'nta', 'Nitab4.5_0009288g0030' => 'nta', 'Nitab4.5_0009341g0010' => 'nta', 'Nitab4.5_0009535g0010' => 'nta', 'Nn1g03995' => 'nnu', 'Nn1g04100' => 'nnu', 'Nn1g06530' => 'nnu', 'Nn3g16404' => 'nnu', 'Nn3g17212' => 'nnu', 'Nn3g20776' => 'nnu', 'Nn3g21923' => 'nnu', 'Nn5g27737' => 'nnu', 'Nn5g29461' => 'nnu', 'Nn7g38355' => 'nnu', 'Nn8g39873' => 'nnu', 'Oeu000548.2' => 'oeu', 'Oeu004672.1' => 'oeu', 'Oeu015605.2' => 'oeu', 'Oeu016092.1' => 'oeu', 'Oeu017879.3' => 'oeu', 'Oeu024910.1' => 'oeu', 'Oeu028965.1' => 'oeu', 'Oeu031269.1' => 'oeu', 'Oeu031270.1' => 'oeu', 'Oeu032535.1' => 'oeu', 'Oeu034151.1' => 'oeu', 'Oeu034152.1' => 'oeu', 'Oeu034588.2' => 'oeu', 'Oeu050846.1' => 'oeu', 'Oeu050849.2' => 'oeu', 'Oeu051063.2' => 'oeu', 'Oeu052368.1' => 'oeu', 'Oeu052370.1' => 'oeu', 'Os01g0210400' => 'osa', 'Os01g0304300' => 'osa', 'Os01g0749100' => 'osa', 'Os02g0745800' => 'osa', 'Os03g0769050' => 'osa', 'Os05g0531500' => 'osa', 'Os06g0724300' => 'osa', 'Os11g0198100' => 'osa', 'Peaxi162Scf00069g01425' => 'pax', 'Peaxi162Scf00280g00811' => 'pax', 'Peaxi162Scf00310g00615' => 'pax', 'Peaxi162Scf00362g00542' => 'pax', 'Peaxi162Scf00461g00310' => 'pax', 'Peaxi162Scf00530g00118' => 'pax', 'Peaxi162Scf00541g00057' => 'pax', 'Peaxi162Scf00661g00017' => 'pax', 'Peaxi162Scf00926g00027' => 'pax', 'Peaxi162Scf01064g00263' => 'pax', 'Peaxi162Scf01211g00135' => 'pax', 'PGR004G2336' => 'pgr', 'PGR042G0327' => 'pgr', 'PGR042G1957' => 'pgr', 'PGR042G2003' => 'pgr', 'PGR042G3929' => 'pgr', 'PGR083G1137' => 'pgr', 'PGR083G1364' => 'pgr', 'PGSC0003DMG400003381' => 'stu', 'PGSC0003DMG400003417' => 'stu', 'PGSC0003DMG400008981' => 'stu', 'PGSC0003DMG400012417' => 'stu', 'PGSC0003DMG400012823' => 'stu', 'PGSC0003DMG400016885' => 'stu', 'PGSC0003DMG400022812' => 'stu', 'PGSC0003DMG400029726' => 'stu', 'PGSC0003DMG401009243' => 'stu', 'PGSC0003DMG401031505' => 'stu', 'PGSC0003DMG402031505' => 'stu', 'Phvul.001G017600' => 'pvu', 'Phvul.002G193500' => 'pvu', 'Phvul.002G228900' => 'pvu', 'Phvul.002G236800' => 'pvu', 'Phvul.003G049500' => 'pvu', 'Phvul.005G072000' => 'pvu', 'Phvul.006G164800' => 'pvu', 'Phvul.006G185100' => 'pvu', 'Phvul.007G090000' => 'pvu', 'Potri.001G399800' => 'ptr', 'Potri.002G149900' => 'ptr', 'Potri.004G044100' => 'ptr', 'Potri.004G177600' => 'ptr', 'Potri.009G138000' => 'ptr', 'Potri.010G094000' => 'ptr', 'Potri.011G053000' => 'ptr', 'Potri.011G119300' => 'ptr', 'Potri.013G113700' => 'ptr', 'Potri.018G107800' => 'ptr', 'Potri.019G084100' => 'ptr', 'Pp3c14_23720' => 'ppa', 'Pp3c16_6340' => 'ppa', 'Pp3c23_13420' => 'ppa', 'Pp3c24_2740' => 'ppa', 'Pp3c25_860' => 'ppa', 'Pp3c8_21750' => 'ppa', 'Prupe.1G273000' => 'ppe', 'Prupe.1G273700' => 'ppe', 'Prupe.1G274100' => 'ppe', 'Prupe.2G023300' => 'ppe', 'Prupe.4G048000' => 'ppe', 'Prupe.4G080400' => 'ppe', 'Prupe.4G181200' => 'ppe', 'Prupe.8G056900' => 'ppe', 'Prupe.8G168700' => 'ppe', 'Psat1g189080' => 'psa', 'Psat1g204760' => 'psa', 'Psat4g175560' => 'psa', 'Psat4g177720' => 'psa', 'Psat5g244240' => 'psa', 'Psat6g010720' => 'psa', 'Psat6g187200' => 'psa', 'Psat7g072040' => 'psa', 'PSO017G3501' => 'pso', 'PSO063G2148' => 'pso', 'PSO063G5608' => 'pso', 'PSO210G6392' => 'pso', 'PSO541G2319' => 'pso', 'PSO541G2836' => 'pso', 'PSO541G4012' => 'pso', 'PSO541G6253' => 'pso', 'PSO675G0580' => 'pso', 'PSO675G0856' => 'pso', 'PSO675G5635' => 'pso', 'PSO675G9157' => 'pso', 'PSO832G1660' => 'pso', 'PSO832G1969' => 'pso', 'QL02p007186' => 'qlo', 'QL02p033904' => 'qlo', 'QL03p064391' => 'qlo', 'QL05p040593' => 'qlo', 'QL05p058242' => 'qlo', 'QL08p021825' => 'qlo', 'QL11p004981' => 'qlo', 'RcHm_v2.0_Chr1g0318301' => 'rch', 'RcHm_v2.0_Chr4g0418501' => 'rch', 'RcHm_v2.0_Chr4g0439971' => 'rch', 'RcHm_v2.0_Chr5g0008541' => 'rch', 'RcHm_v2.0_Chr5g0014101' => 'rch', 'RcHm_v2.0_Chr5g0014131' => 'rch', 'RcHm_v2.0_Chr5g0033621' => 'rch', 'RcHm_v2.0_Chr6g0272041' => 'rch', 'RcHm_v2.0_Chr6g0278831' => 'rch', 'Rhsim02G0130400' => 'rsi', 'Rhsim02G0171100' => 'rsi', 'Rhsim05G0053000' => 'rsi', 'Rhsim05G0053100' => 'rsi', 'Rhsim06G0096500' => 'rsi', 'Rhsim06G0096600' => 'rsi', 'Rhsim06G0199100' => 'rsi', 'Rhsim12G0062300' => 'rsi', 'Rhsim12G0062800' => 'rsi', 'Sabra02G0118600' => 'sbr', 'Sabra04G0027300' => 'sbr', 'Sabra04G0119500' => 'sbr', 'Sabra08G0112500' => 'sbr', 'Sabra11G0036800' => 'sbr', 'Sabra11G0103800' => 'sbr', 'Sabra13G0096300' => 'sbr', 'Sabra16G0262300' => 'sbr', 'Sabra18G0091700' => 'sbr', 'Sabra19G0095400' => 'sbr', 'SalBow6G3080' => 'sbo', 'SalBow7G1157' => 'sbo', 'SalBow7G2123' => 'sbo', 'SalBow7G2285' => 'sbo', 'SalBow7G3537' => 'sbo', 'SalBow8G2947' => 'sbo', 'SalBow8G4463' => 'sbo', 'SalBow8G5466' => 'sbo', 'Sc01g0001750' => 'sci', 'Sc02g0006640' => 'sci', 'Sc02g0006670' => 'sci', 'Sc04g0008220' => 'sci', 'Sc05g0006190' => 'sci', 'Sc08g0002760' => 'sci', 'Sc17g0006170' => 'sci', 'Sc22g0002050' => 'sci', 'Sc23g0001190' => 'sci', 'Sc24g0000980' => 'sci', 'Sed0006245' => 'sed', 'Sed0007543' => 'sed', 'Sed0009411' => 'sed', 'Sed0010765' => 'sed', 'Sed0012944' => 'sed', 'Sed0014682' => 'sed', 'Sed0016174' => 'sed', 'Sed0016796' => 'sed', 'Sed0020317' => 'sed', 'Sed0021467' => 'sed', 'SEGI_01316' => 'sgi', 'SEGI_03374' => 'sgi', 'SEGI_16265' => 'sgi', 'SEGI_18569' => 'sgi', 'SEGI_20351' => 'sgi', 'SEGI_26395' => 'sgi', 'SEGI_29469' => 'sgi', 'SEGI_34771' => 'sgi', 'SEGI_36769' => 'sgi', 'SEGI_37139' => 'sgi', 'SGA_v2.0_scaffold100G29687' => 'sas', 'SGA_v2.0_scaffold118G32472' => 'sas', 'SGA_v2.0_scaffold14G07051' => 'sas', 'SGA_v2.0_scaffold183G39845' => 'sas', 'SGA_v2.0_scaffold1G00174' => 'sas', 'SGA_v2.0_scaffold22G09714' => 'sas', 'SGA_v2.0_scaffold333G48992' => 'sas', 'SGA_v2.0_scaffold46G17491' => 'sas', 'SGA_v2.0_scaffold49G18294' => 'sas', 'SGA_v2.0_scaffold63G21658' => 'sas', 'SHI01741' => 'shi', 'SHI05771' => 'shi', 'SHI18077' => 'shi', 'SHI20525' => 'shi', 'SHI20527' => 'shi', 'SHI20528' => 'shi', 'SMO172G0185' => 'smo', 'SMO198G0020' => 'smo', 'SMO351G0006' => 'smo', 'SMO356G0118' => 'smo', 'SMO358G0296' => 'smo', 'SMO367G0079' => 'smo', 'SMO367G1277' => 'smo', 'Solyc01g014220.3' => 'sly', 'Solyc01g111770.2' => 'sly', 'Solyc02g078180.3' => 'sly', 'Solyc03g006430.3' => 'sly', 'Solyc03g006456.1' => 'sly', 'Solyc03g079860.2' => 'sly', 'Solyc04g079770.3' => 'sly', 'Solyc05g007430.4' => 'sly', 'Solyc07g063150.3' => 'sly', 'Solyc08g016620.3' => 'sly', 'Solyc09g057590.3' => 'sly', 'Solyc09g057600.1' => 'sly', 'Solyc10g009050.3' => 'sly', 'Solyc11g017420.2' => 'sly', 'Sopen01g053810' => 'spe', 'Sopen02g023040' => 'spe', 'Sopen03g002440' => 'spe', 'Sopen04g033350' => 'spe', 'Sopen05g003310' => 'spe', 'Sopen07g004050' => 'spe', 'Sopen07g031340' => 'spe', 'Sopen08g006990' => 'spe', 'Sopen10g004830' => 'spe', 'Sopen11g009370' => 'spe', 'Sp1g24450' => 'spa', 'Sp1g29670' => 'spa', 'Sp1g39600' => 'spa', 'Sp2g11080' => 'spa', 'Sp2g13970' => 'spa', 'Sp4g16130' => 'spa', 'Sp6g13080' => 'spa', 'Sp7g37270' => 'spa', 'TAR371G0065' => 'tar', 'TAR376G0340' => 'tar', 'TAR376G0435' => 'tar', 'TAR381G0002' => 'tar', 'TAR381G1236' => 'tar', 'TAR624G0055' => 'tar', 'TAR624G0324' => 'tar', 'TAR624G0696' => 'tar', 'TAR624G0906' => 'tar', 'TAR625G0107' => 'tar', 'TAR626G0015' => 'tar', 'TAR626G1356' => 'tar', 'TAR627G0888' => 'tar', 'TAR628G0399' => 'tar', 'TAR628G1327' => 'tar', 'TAR629G2831' => 'tar', 'TAR629G2874' => 'tar', 'TAR633G1432' => 'tar', 'TAR633G2771' => 'tar', 'THA.LOC104803394' => 'tha', 'THA.LOC104805153' => 'tha', 'THA.LOC104806784' => 'tha', 'THA.LOC104810473' => 'tha', 'THA.LOC104813100' => 'tha', 'THA.LOC104814215' => 'tha', 'THA.LOC104815554' => 'tha', 'THA.LOC104820544' => 'tha', 'THA.LOC104824754' => 'tha', 'THA.LOC104827717' => 'tha', 'Thecc.02G031400' => 'tca', 'Thecc.02G055900' => 'tca', 'Thecc.02G350800' => 'tca', 'Thecc.06G150900' => 'tca', 'Thecc.06G186600' => 'tca', 'Thecc.07G089600' => 'tca', 'Thecc.08G020400' => 'tca', 'Thecc.08G182100' => 'tca', 'Thhalv10000873m.g' => 'esa', 'Thhalv10004185m.g' => 'esa', 'Thhalv10006981m.g' => 'esa', 'Thhalv10007204m.g' => 'esa', 'Thhalv10011374m.g' => 'esa', 'Thhalv10013482m.g' => 'esa', 'Thhalv10017801m.g' => 'esa', 'Thhalv10024983m.g' => 'esa', 'TPR.G12072' => 'tpr', 'TPR.G15769' => 'tpr', 'TPR.G16504' => 'tpr', 'TPR.G16506' => 'tpr', 'TPR.G24345' => 'tpr', 'TPR.G26666' => 'tpr', 'TPR.G27320' => 'tpr', 'TPR.G31819' => 'tpr', 'TPR.G38879' => 'tpr', 'TPR.G39015' => 'tpr', 'TPR.G8819' => 'tpr', 'TWI09G0924' => 'twi', 'TWI12G0811' => 'twi', 'TWI12G1294' => 'twi', 'TWI31G0150' => 'twi', 'TWI36G1262' => 'twi', 'TWI38G1287' => 'twi', 'TWI38G1633' => 'twi', 'TWI38G1982' => 'twi', 'TWI39G0116' => 'twi', 'TWI60G1011' => 'twi', 'TWI63G0171' => 'twi', 'TWI73G0839' => 'twi', 'TWI79G1511' => 'twi', 'unitig_0.g915' => 'ugi', 'unitig_0.g916' => 'ugi', 'unitig_21.g20219' => 'ugi', 'unitig_21.g20416' => 'ugi', 'unitig_578.g16132' => 'ugi', 'unitig_578.g16718' => 'ugi', 'unitig_62.g23481' => 'ugi', 'unitig_744.g24535' => 'ugi', 'unitig_749.g13525' => 'ugi', 'vmacro01248' => 'vma', 'vmacro02290' => 'vma', 'vmacro10946' => 'vma', 'vmacro11865' => 'vma', 'vmacro12493' => 'vma', 'vmacro17322' => 'vma', 'vmacro21599' => 'vma', 'vmacro23041' => 'vma', 'VMungo0251G0004' => 'vmu', 'VMungo0251G2639' => 'vmu', 'VMungo0251G2967' => 'vmu', 'VMungo0540G0864' => 'vmu', 'VMungo0540G1569' => 'vmu', 'VMungo0647G0317' => 'vmu', 'VMungo0720G1373' => 'vmu', 'VMungo0720G1508' => 'vmu', 'VMungo1080G0485' => 'vmu', 'VMungo1215G3177' => 'vmu', 'Zm00001eb112600' => 'zma', 'Zm00001eb120220' => 'zma', 'Zm00001eb153240' => 'zma', 'Zm00001eb168880' => 'zma', 'Zm00001eb213920' => 'zma', 'Zm00001eb228280' => 'zma', 'Zm00001eb254580' => 'zma', 'Zm00001eb272180' => 'zma', 'Zm00001eb293190' => 'zma', 'Zm00001eb322930' => 'zma', 'Zm00001eb353360' => 'zma', 'Zm00001eb353390' => 'zma', 'Zm00001eb353430' => 'zma', 'Zm00001eb353440' => 'zma', 'Zm00001eb353780' => 'zma' ) $gf_id = 'HOM05D000499' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000499' ) $data_identifier = 'HOM05D000499' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 29, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 12, 'amhyb' => (int) 8, 'aly' => (int) 12, 'aox' => (int) 9, 'arhy' => (int) 26, 'ath' => (int) 8, 'atr' => (int) 7, 'acertr' => (int) 10, 'cqu' => (int) 15, 'bca' => (int) 29, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 11, 'cansat' => (int) 8, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 9, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 8, 'cpa' => (int) 10, 'csa' => (int) 7, 'camsi' => (int) 20, 'dca' => (int) 8, 'din' => (int) 12, 'dzi' => (int) 14, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 6, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 38, 'gra' => (int) 16, 'vvi' => (int) 8, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 5, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 11, 'lja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 11, 'mpo' => (int) 3, 'mbi' => (int) 14, 'mdo' => (int) 14, 'mtr' => (int) 8, 'cme' => (int) 9, 'egut' => (int) 9, 'ama' => (int) 11, 'nta' => (int) 17, 'nnu' => (int) 11, 'oeu' => (int) 18, 'osa' => (int) 8, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 6, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 9, 'rsi' => (int) 9, 'sbr' => (int) 10, 'sbo' => (int) 8, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 10, 'sas' => (int) 10, 'shi' => (int) 6, 'smo' => (int) 7, 'sly' => (int) 14, 'spe' => (int) 10, 'spa' => (int) 8, 'tar' => (int) 19, 'tha' => (int) 10, 'tca' => (int) 8, 'esa' => (int) 8, 'tpr' => (int) 11, 'twi' => (int) 13, 'ugi' => (int) 9, 'vma' => (int) 8, 'vmu' => (int) 10, 'zma' => (int) 15 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb353780' $species_info = array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ) $local_species = 'vpl' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000499', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1066', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p29780' => 'bna', 'A02p33180' => 'bna', 'A03p16470' => 'bna', 'A03p66010' => 'bna', 'A04p25970' => 'bna', 'A06p01270' => 'bna', 'A06p46080' => 'bna', 'A07p11400' => 'bna', 'A08p01840' => 'bna', 'A08p08230' => 'bna', 'A08p25740' => 'bna', 'A09p32070' => 'bna', 'A09p37830' => 'bna', 'A09p42840' => 'bna', 'A09p42850' => 'bna', 'Aa31LG10G2060' => 'aar', 'Aa31LG2G7410' => 'aar', 'Aa31LG6G10200' => 'aar', 'Aa31LG6G16680' => 'aar', 'Aa31LG6G8470' => 'aar', 'Aa31LG9G12730' => 'aar', 'Aa31LG9G13680' => 'aar', 'Aa31LG9G14920' => 'aar', 'Aa31LG9G6650' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4977' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5467' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3254' => 'aag', 'Actinidia02578' => 'ach', 'Actinidia07693' => 'ach', 'Actinidia08413' => 'ach', 'Actinidia08414' => 'ach', 'Actinidia15289' => 'ach', 'Actinidia19871' => 'ach', 'Actinidia21475' => 'ach', 'Actinidia22576' => 'ach', 'Actinidia28327' => 'ach', 'Actinidia32491' => 'ach', 'Actinidia39463' => 'ach', 'Actinidia39571' => 'ach', 'Ah.01g013750' => 'amhyb', 'Ah.01g023210' => 'amhyb', 'Ah.04g164850' => 'amhyb', 'Ah.05g178060' => 'amhyb', 'Ah.07g204270' => 'amhyb', 'Ah.07g208480' => 'amhyb', 'Ah.09g237410' => 'amhyb', 'Ah.14g089460' => 'amhyb', 'AL1G41790' => 'aly', 'AL1G49050' => 'aly', 'AL1G53810' => 'aly', 'AL1G61400' => 'aly', 'AL4G18580' => 'aly', 'AL5G12510' => 'aly', 'AL5G12540' => 'aly', 'AL6G43230' => 'aly', 'AL7G10370' => 'aly', 'AL7G19250' => 'aly', 'AL8G12240' => 'aly', 'AL8G18540' => 'aly', 'Aqoxy1G02409' => 'aox', 'Aqoxy2G03993' => 'aox', 'Aqoxy3G03357' => 'aox', 'Aqoxy4G00785' => 'aox', 'Aqoxy5G02598' => 'aox', 'Aqoxy6G00132' => 'aox', 'Aqoxy7G01776' => 'aox', 'Aqoxy7G02316' => 'aox', 'Aqoxy7G03973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.12AFKW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B8730' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27IQR1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3F75VG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3RE0GA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41TCQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.527VTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FIR39' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5W8UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DA38EV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ63HS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H1I32C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HC27T5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4M8AP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7N3CZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9UVDZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LS1NQA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT1D4B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SKC4TM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCFV76' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF9Q1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQWD9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1ZM88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WE07RT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YCK7VH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJE6Q6' => 'arhy', 'AT1G28240' => 'ath', 'AT1G34550' => 'ath', 'AT1G53040' => 'ath', 'AT2G02910' => 'ath', 'AT4G09630' => 'ath', 'AT4G38500' => 'ath', 'AT5G42660' => 'ath', 'AT5G46220' => 'ath', 'ATR0152G026' => 'atr', 'ATR0564G343' => 'atr', 'ATR0706G151' => 'atr', 'ATR0733G207' => 'atr', 'ATR0751G234' => 'atr', 'ATR0807G048' => 'atr', 'ATR1091G084' => 'atr', 'Atru.chr10.1229' => 'acertr', 'Atru.chr10.1230' => 'acertr', 'Atru.chr10.1874' => 'acertr', 'Atru.chr11.1808' => 'acertr', 'Atru.chr13.1795' => 'acertr', 'Atru.chr13.570' => 'acertr', 'Atru.chr2.2608' => 'acertr', 'Atru.chr2.2609' => 'acertr', 'Atru.chr5.3428' => 'acertr', 'Atru.chr8.1171' => 'acertr', 'AUR62004651' => 'cqu', 'AUR62008675' => 'cqu', 'AUR62010014' => 'cqu', 'AUR62013004' => 'cqu', 'AUR62014825' => 'cqu', 'AUR62015015' => 'cqu', 'AUR62015151' => 'cqu', 'AUR62017020' => 'cqu', 'AUR62019422' => 'cqu', 'AUR62023570' => 'cqu', 'AUR62025571' => 'cqu', 'AUR62029098' => 'cqu', 'AUR62033863' => 'cqu', 'AUR62034296' => 'cqu', 'AUR62040075' => 'cqu', 'BcaB02g07334' => 'bca', 'BcaB02g10575' => 'bca', 'BcaB03g12119' => 'bca', 'BcaB03g12120' => 'bca', 'BcaB03g13945' => 'bca', 'BcaB04g17123' => 'bca', 'BcaB04g17867' => 'bca', 'BcaB04g19839' => 'bca', 'BcaB07g30317' => 'bca', 'BcaB07g32432' => 'bca', 'BcaB07g33362' => 'bca', 'BcaB08g36611' => 'bca', 'BcaC01g00028' => 'bca', 'BcaC01g01356' => 'bca', 'BcaC01g02034' => 'bca', 'BcaC01g06051' => 'bca', 'BcaC03g16839' => 'bca', 'BcaC03g17176' => 'bca', 'BcaC05g26829' => 'bca', 'BcaC06g31490' => 'bca', 'BcaC06g35344' => 'bca', 'BcaC06g36570' => 'bca', 'BcaC07g37537' => 'bca', 'BcaC08g43491' => 'bca', 'BcaC08g43773' => 'bca', 'BcaNung00234' => 'bca', 'BcaNung01982' => 'bca', 'BcaNung03707' => 'bca', 'BcaNung06454' => 'bca', 'BolC2t10762H' => 'bol', 'BolC2t11191H' => 'bol', 'BolC3t14322H' => 'bol', 'BolC3t19747H' => 'bol', 'BolC3t21425H' => 'bol', 'BolC4t27800H' => 'bol', 'BolC5t31423H' => 'bol', 'BolC6t35951H' => 'bol', 'BolC6t36282H' => 'bol', 'BolC7t40678H' => 'bol', 'BolC7t40679H' => 'bol', 'BolC7t42222H' => 'bol', 'BolC7t43492H' => 'bol', 'BolC7t46785H' => 'bol', 'BolC8t47853H' => 'bol', 'BolC9t56805H' => 'bol', 'BraA02t08000Z' => 'bra', 'BraA02t08341Z' => 'bra', 'BraA03t10936Z' => 'bra', 'BraA03t15657Z' => 'bra', 'BraA04t18100Z' => 'bra', 'BraA05t20523Z' => 'bra', 'BraA06t23353Z' => 'bra', 'BraA06t27473Z' => 'bra', 'BraA06t27769Z' => 'bra', 'BraA07t28928Z' => 'bra', 'BraA08t32236Z' => 'bra', 'BraA08t32841Z' => 'bra', 'BraA08t34524Z' => 'bra', 'BraA09t38742Z' => 'bra', 'BraA09t39295Z' => 'bra', 'C02p47180' => 'bna', 'C02p50990' => 'bna', 'C03p19360' => 'bna', 'C03p74950' => 'bna', 'C03p91000' => 'bna', 'C04p63260' => 'bna', 'C05p27050' => 'bna', 'C06p08750' => 'bna', 'C06p11490' => 'bna', 'C07p02820' => 'bna', 'C07p17180' => 'bna', 'C07p29440' => 'bna', 'C07p63730' => 'bna', 'C09p39260' => 'bna', 'CAN.G1164.34' => 'can', 'CAN.G1164.39' => 'can', 'CAN.G1530.3' => 'can', 'CAN.G162.61' => 'can', 'CAN.G176.6' => 'can', 'CAN.G289.49' => 'can', 'CAN.G370.21' => 'can', 'CAN.G370.22' => 'can', 'CAN.G371.117' => 'can', 'CAN.G58.37' => 'can', 'CAN.G588.98' => 'can', 'CANSAT21G2266' => 'cansat', 'CANSAT25G2799' => 'cansat', 'CANSAT35G0862' => 'cansat', 'CANSAT35G1704' => 'cansat', 'CANSAT35G1760' => 'cansat', 'CANSAT56G3971' => 'cansat', 'CANSAT56G4116' => 'cansat', 'CANSAT80G1259' => 'cansat', 'CARHR027730' => 'chi', 'CARHR033880' => 'chi', 'CARHR043270' => 'chi', 'CARHR145330' => 'chi', 'CARHR145340' => 'chi', 'CARHR175570' => 'chi', 'CARHR181570' => 'chi', 'CARHR258470' => 'chi', 'CARHR260490' => 'chi', 'CARHR294220' => 'chi', 'Carub.0001s2668' => 'cru', 'Carub.0001s3257' => 'cru', 'Carub.0001s4220' => 'cru', 'Carub.0005s0179' => 'cru', 'Carub.0006s2807' => 'cru', 'Carub.0007s0039' => 'cru', 'Carub.0008s0169' => 'cru', 'Carub.0008s0636' => 'cru', 'Ca_00338_v3' => 'car', 'Ca_00542_v3' => 'car', 'Ca_01844_v3' => 'car', 'Ca_10611_v3' => 'car', 'Ca_13326_v3' => 'car', 'Ca_17944_v3' => 'car', 'Ca_18546_v3' => 'car', 'Ca_24219_v3' => 'car', 'Ca_29972_v3' => 'car', 'CBR_g3681' => 'cbr', 'CBR_g40021' => 'cbr', 'Cc01_g08140' => 'ccan', 'Cc02_g13410' => 'ccan', 'Cc02_g37480' => 'ccan', 'Cc05_g12030' => 'ccan', 'Cc09_g03370' => 'ccan', 'Cc09_g10300' => 'ccan', 'Cc10_g03530' => 'ccan', 'Cc10_g11380' => 'ccan', 'CDE01G0176' => 'cde', 'CDE02G0675' => 'cde', 'CDE02G0942' => 'cde', 'CDE02G1153' => 'cde', 'CDE02G4177' => 'cde', 'CDE04G2117' => 'cde', 'CDE04G2736' => 'cde', 'CDE08G1161' => 'cde', 'CDE09G1238' => 'cde', 'Cfa000467' => 'cfa', 'Cfa000947' => 'cfa', 'Cfa004969' => 'cfa', 'Cfa005284' => 'cfa', 'Cfa008993' => 'cfa', 'Cfa018187' => 'cfa', 'Cfa018454' => 'cfa', 'Cfa020585' => 'cfa', 'Ciclev10000424m.g' => 'ccl', 'Ciclev10003605m.g' => 'ccl', 'Ciclev10007828m.g' => 'ccl', 'Ciclev10014620m.g' => 'ccl', 'Ciclev10015169m.g' => 'ccl', 'Ciclev10018291m.g' => 'ccl', 'Ciclev10028256m.g' => 'ccl', 'Ciclev10033822m.g' => 'ccl', 'CiPaw.05G060300' => 'cil', 'CiPaw.05G085000' => 'cil', 'CiPaw.06G083700' => 'cil', 'CiPaw.06G120300' => 'cil', 'CiPaw.09G060500' => 'cil', 'CiPaw.09G123800' => 'cil', 'CiPaw.11G169700' => 'cil', 'CiPaw.12G118300' => 'cil', 'CiPaw.15G071000' => 'cil', 'CiPaw.15G081900' => 'cil', 'ClCG01G024610' => 'cla', 'ClCG03G006070' => 'cla', 'ClCG05G019250' => 'cla', 'ClCG09G009500' => 'cla', 'ClCG11G008200' => 'cla', 'ClCG11G018080' => 'cla', 'COL.COLO4_17373' => 'col', 'COL.COLO4_22994' => 'col', 'COL.COLO4_26389' => 'col', 'COL.COLO4_27170' => 'col', 'COL.COLO4_31074' => 'col', 'COL.COLO4_31465' => 'col', 'COL.COLO4_36438' => 'col', 'COL.COLO4_36439' => 'col', 'Cpa.g.c38781' => 'cpa', 'Cpa.g.sc128.12' => 'cpa', 'Cpa.g.sc166.7' => 'cpa', 'Cpa.g.sc166.8' => 'cpa', 'Cpa.g.sc20.111' => 'cpa', 'Cpa.g.sc27.31' => 'cpa', 'Cpa.g.sc64.36' => 'cpa', 'Cpa.g.sc64.37' => 'cpa', 'Cpa.g.sc66.49' => 'cpa', 'Cpa.g.sc80.64' => 'cpa', 'CsaV3_1G012320' => 'csa', 'CsaV3_2G008480' => 'csa', 'CsaV3_2G033450' => 'csa', 'CsaV3_3G044830' => 'csa', 'CsaV3_4G033710' => 'csa', 'CsaV3_6G051730' => 'csa', 'CsaV3_7G025350' => 'csa', 'CSS0001067' => 'camsi', 'CSS0005996' => 'camsi', 'CSS0006590' => 'camsi', 'CSS0009673' => 'camsi', 'CSS0010201' => 'camsi', 'CSS0010549' => 'camsi', 'CSS0011364' => 'camsi', 'CSS0014473' => 'camsi', 'CSS0014961' => 'camsi', 'CSS0020191' => 'camsi', 'CSS0021165' => 'camsi', 'CSS0022306' => 'camsi', 'CSS0030591' => 'camsi', 'CSS0030696' => 'camsi', 'CSS0032653' => 'camsi', 'CSS0037487' => 'camsi', 'CSS0041102' => 'camsi', 'CSS0041261' => 'camsi', 'CSS0046246' => 'camsi', 'CSS0049256' => 'camsi', 'DCAR_004075' => 'dca', 'DCAR_011538' => 'dca', 'DCAR_019553' => 'dca', 'DCAR_020952' => 'dca', 'DCAR_021739' => 'dca', 'DCAR_027407' => 'dca', 'DCAR_027913' => 'dca', 'DCAR_028066' => 'dca', 'Dinv05899' => 'din', 'Dinv07563' => 'din', 'Dinv08010' => 'din', 'Dinv14125' => 'din', 'Dinv20172' => 'din', 'Dinv30743' => 'din', 'Dinv31229' => 'din', 'Dinv34162' => 'din', 'Dinv36028' => 'din', 'Dinv39368' => 'din', 'Dinv40565' => 'din', 'Dinv41706' => 'din', 'Duzib052G0089' => 'dzi', 'Duzib116G0641' => 'dzi', 'Duzib132G0069' => 'dzi', 'Duzib132G1219' => 'dzi', 'Duzib147G0278' => 'dzi', 'Duzib160G0480' => 'dzi', 'Duzib170G0661' => 'dzi', 'Duzib177G0591' => 'dzi', 'Duzib187G1353' => 'dzi', 'Duzib192G0858' => 'dzi', 'Duzib192G0883' => 'dzi', 'Duzib213G0506' => 'dzi', 'Duzib235G0289' => 'dzi', 'Duzib251G0422' => 'dzi', 'ECA232G3898' => 'eca', 'ECA233G5950' => 'eca', 'ECA234G1699' => 'eca', 'ECA234G2421' => 'eca', 'ECA236G0426' => 'eca', 'ECA236G4331' => 'eca', 'ECA248G2573' => 'eca', 'EL10Ac1g00077' => 'bvu', 'EL10Ac1g01746' => 'bvu', 'EL10Ac2g03464' => 'bvu', 'EL10Ac4g08176' => 'bvu', 'EL10Ac7g17521' => 'bvu', 'EL10Ac8g20386' => 'bvu', 'EL10Ac9g21343' => 'bvu', 'EL10Ac9g22688' => 'bvu', 'Eucgr.B03434' => 'egr', 'Eucgr.D00618' => 'egr', 'Eucgr.E02395' => 'egr', 'Eucgr.F01129' => 'egr', 'Eucgr.F02622' => 'egr', 'Eucgr.F04207' => 'egr', 'FAN01G0570' => 'fan', 'FAN03G3351' => 'fan', 'FAN06G3702' => 'fan', 'FAN07G2149' => 'fan', 'FAN10G3758' => 'fan', 'FAN11G1170' => 'fan', 'FAN11G2050' => 'fan', 'FAN11G2724' => 'fan', 'FAN12G1700' => 'fan', 'FAN12G2028' => 'fan', 'FAN15G1160' => 'fan', 'FAN15G3063' => 'fan', 'FAN16G2540' => 'fan', 'FAN16G3077' => 'fan', 'FAN16G3624' => 'fan', 'FAN17G0221' => 'fan', 'FAN20G2492' => 'fan', 'FAN20G2905' => 'fan', 'FAN21G0548' => 'fan', 'FAN21G1300' => 'fan', 'FAN22G0077' => 'fan', 'FAN22G1315' => 'fan', 'FAN24G1280' => 'fan', 'FAN24G1445' => 'fan', 'FAN24G3527' => 'fan', 'FAN25G0464' => 'fan', 'FAN25G2885' => 'fan', 'FAN25G3270' => 'fan', 'FAN27G1101' => 'fan', 'FAN27G2846' => 'fan', 'FAN27G3524' => 'fan', 'FvH4_2g11770' => 'fve', 'FvH4_2g15630' => 'fve', 'FvH4_3g05570' => 'fve', 'FvH4_3g09110' => 'fve', 'FvH4_3g19940' => 'fve', 'FvH4_4g04821' => 'fve', 'FvH4_4g31480' => 'fve', 'FvH4_7g01740' => 'fve', 'Glyma.05G130400' => 'gma', 'Glyma.05G156400' => 'gma', 'Glyma.07G197000' => 'gma', 'Glyma.08G085151' => 'gma', 'Glyma.08G114500' => 'gma', 'Glyma.08G300400' => 'gma', 'Glyma.10G215800' => 'gma', 'Glyma.12G224400' => 'gma', 'Glyma.13G179300' => 'gma', 'Glyma.13G218151' => 'gma', 'Glyma.13G238800' => 'gma', 'Glyma.13G276900' => 'gma', 'Glyma.14G078200' => 'gma', 'Glyma.15G074500' => 'gma', 'Glyma.15G094100' => 'gma', 'Glyma.17G247200' => 'gma', 'Glyma.18G120100' => 'gma', 'Glyma.20G176000' => 'gma', 'Gohir.A01G063600' => 'ghi', 'Gohir.A01G170301' => 'ghi', 'Gohir.A02G060500' => 'ghi', 'Gohir.A05G133850' => 'ghi', 'Gohir.A05G161400' => 'ghi', 'Gohir.A06G012900' => 'ghi', 'Gohir.A06G035901' => 'ghi', 'Gohir.A06G127100' => 'ghi', 'Gohir.A06G210500' => 'ghi', 'Gohir.A08G008650' => 'ghi', 'Gohir.A09G072700' => 'ghi', 'Gohir.A09G088301' => 'ghi', 'Gohir.A10G040600' => 'ghi', 'Gohir.A12G036300' => 'ghi', 'Gohir.A12G143350' => 'ghi', 'Gohir.A12G165500' => 'ghi', 'Gohir.A13G145700' => 'ghi', 'Gohir.D01G050000' => 'ghi', 'Gohir.D01G051366' => 'ghi', 'Gohir.D01G161350' => 'ghi', 'Gohir.D02G065900' => 'ghi', 'Gohir.D05G164200' => 'ghi', 'Gohir.D05G355500' => 'ghi', 'Gohir.D06G010400' => 'ghi', 'Gohir.D06G111250' => 'ghi', 'Gohir.D06G132000' => 'ghi', 'Gohir.D06G210500' => 'ghi', 'Gohir.D07G165675' => 'ghi', 'Gohir.D08G062240' => 'ghi', 'Gohir.D08G086101' => 'ghi', 'Gohir.D08G138060' => 'ghi', 'Gohir.D09G072300' => 'ghi', 'Gohir.D10G041400' => 'ghi', 'Gohir.D11G191020' => 'ghi', 'Gohir.D11G212066' => 'ghi', 'Gohir.D12G036300' => 'ghi', 'Gohir.D12G168600' => 'ghi', 'Gohir.D13G150600' => 'ghi', 'Gorai.001G057300' => 'gra', 'Gorai.002G069900' => 'gra', 'Gorai.002G200000' => 'gra', 'Gorai.003G067600' => 'gra', 'Gorai.005G074800' => 'gra', 'Gorai.006G087300' => 'gra', 'Gorai.008G037500' => 'gra', 'Gorai.008G181400' => 'gra', 'Gorai.009G169400' => 'gra', 'Gorai.009G387900' => 'gra', 'Gorai.010G013300' => 'gra', 'Gorai.010G153800' => 'gra', 'Gorai.010G255800' => 'gra', 'Gorai.011G043700' => 'gra', 'Gorai.011G198900' => 'gra', 'Gorai.013G168400' => 'gra', 'GSVIVG01005212001' => 'vvi', 'GSVIVG01006163001' => 'vvi', 'GSVIVG01009625001' => 'vvi', 'GSVIVG01014338001' => 'vvi', 'GSVIVG01020005001' => 'vvi', 'GSVIVG01021450001' => 'vvi', 'GSVIVG01023975001' => 'vvi', 'GSVIVG01034490001' => 'vvi', 'HanXRQChr04g0112071' => 'han', 'HanXRQChr05g0131151' => 'han', 'HanXRQChr09g0262371' => 'han', 'HanXRQChr09g0268401' => 'han', 'HanXRQChr10g0279241' => 'han', 'HanXRQChr10g0297961' => 'han', 'HanXRQChr11g0326231' => 'han', 'HanXRQChr11g0328471' => 'han', 'HanXRQChr16g0507941' => 'han', 'HanXRQChr17g0560211' => 'han', 'Haze_02108' => 'cav', 'Haze_02428' => 'cav', 'Haze_05593' => 'cav', 'Haze_06448' => 'cav', 'Haze_09427' => 'cav', 'Haze_12022' => 'cav', 'Haze_17612' => 'cav', 'Haze_17928' => 'cav', 'Hma1.2p1_0032F.1_g019250' => 'hma', 'Hma1.2p1_0163F.1_g072690' => 'hma', 'Hma1.2p1_0265F.1_g106710' => 'hma', 'Hma1.2p1_0286F.1_g113970' => 'hma', 'Hma1.2p1_0363F.1_g136640' => 'hma', 'Hma1.2p1_0584F.1_g183470' => 'hma', 'Hma1.2p1_0885F.1_g232570' => 'hma', 'HPP92_006022' => 'vpl', 'HPP92_007320' => 'vpl', 'HPP92_011521' => 'vpl', 'HPP92_019387' => 'vpl', 'HPP92_024038' => 'vpl', 'Hund05891' => 'sun', 'Hund06450' => 'sun', 'Hund12053' => 'sun', 'Hund16800' => 'sun', 'Hund21222' => 'sun', 'Hund22896' => 'sun', 'Hund23746' => 'sun', 'Hund27083' => 'sun', 'Lalb_Chr02g0141831' => 'lal', 'Lalb_Chr02g0141841' => 'lal', 'Lalb_Chr05g0220411' => 'lal', 'Lalb_Chr06g0162081' => 'lal', 'Lalb_Chr09g0327651' => 'lal', 'Lalb_Chr13g0295051' => 'lal', 'Lalb_Chr15g0086801' => 'lal', 'Lalb_Chr16g0383781' => 'lal', 'Lalb_Chr16g0383791' => 'lal', 'Lalb_Chr18g0055441' => 'lal', 'Lalb_Chr18g0059611' => 'lal', 'Lalb_Chr20g0109661' => 'lal', 'Lalb_Chr20g0109831' => 'lal', 'Lalb_Chr20g0121871' => 'lal', 'Lalb_Chr22g0355361' => 'lal', 'Lalb_Chr25g0286371' => 'lal', 'Lj1A1187G43' => 'lonja', 'Lj1A1205T50' => 'lonja', 'Lj1A800G33' => 'lonja', 'Lj1C1187T7' => 'lonja', 'Lj1C843T11' => 'lonja', 'Lj1g0010940' => 'lja', 'Lj2A288T69' => 'lonja', 'Lj3g0024276' => 'lja', 'Lj4A47T76' => 'lonja', 'Lj4g0005805' => 'lja', 'Lj4g0006097' => 'lja', 'Lj4g0008528' => 'lja', 'Lj4g0024907' => 'lja', 'Lj5g0012472' => 'lja', 'Lj5g0018648' => 'lja', 'Lj6C789G1' => 'lonja', 'Lj6g0004000' => 'lja', 'Lj7A292G67' => 'lonja', 'Lj7A292T64' => 'lonja', 'Lj9A400T58' => 'lonja', 'Lsat_1_v5_gn_1_126181' => 'lsa', 'Lsat_1_v5_gn_4_123041' => 'lsa', 'Lsat_1_v5_gn_4_133620' => 'lsa', 'Lsat_1_v5_gn_4_53221' => 'lsa', 'Lsat_1_v5_gn_4_71961' => 'lsa', 'Lsat_1_v5_gn_7_105241' => 'lsa', 'Lsat_1_v5_gn_7_21361' => 'lsa', 'Lsat_1_v5_gn_7_28860' => 'lsa', 'Lsat_1_v5_gn_7_31260' => 'lsa', 'Lsat_1_v5_gn_8_52801' => 'lsa', 'Manes.02G191400' => 'mes', 'Manes.03G110100' => 'mes', 'Manes.04G071100' => 'mes', 'Manes.05G100500' => 'mes', 'Manes.05G164700' => 'mes', 'Manes.15G087000' => 'mes', 'Manes.15G121500' => 'mes', 'Manes.16G028300' => 'mes', 'Manes.17G046100' => 'mes', 'Manes.17G069800' => 'mes', 'Manes.18G100500' => 'mes', 'Mapoly0002s0109' => 'mpo', 'Mapoly0024s0007' => 'mpo', 'Mapoly0089s0032' => 'mpo', 'MBI04_g42241_MAGBIO' => 'mbi', 'MBI05_g11988_MAGBIO' => 'mbi', 'MBI05_g35452_MAGBIO' => 'mbi', 'MBI07_g30179_MAGBIO' => 'mbi', 'MBI07_g35859_MAGBIO' => 'mbi', 'MBI07_g35860_MAGBIO' => 'mbi', 'MBI07_g37166_MAGBIO' => 'mbi', 'MBI08_g18172_MAGBIO' => 'mbi', 'MBI09_g08441_MAGBIO' => 'mbi', 'MBI13_g01676_MAGBIO' => 'mbi', 'MBI14_g42955_MAGBIO' => 'mbi', 'MBI16_g13161_MAGBIO' => 'mbi', 'MBI17_g27204_MAGBIO' => 'mbi', 'MBI19_g21595_MAGBIO' => 'mbi', 'MD00G1148400' => 'mdo', 'MD02G1301200' => 'mdo', 'MD03G1227800' => 'mdo', 'MD05G1041100' => 'mdo', 'MD05G1124800' => 'mdo', 'MD05G1284000' => 'mdo', 'MD05G1338800' => 'mdo', 'MD05G1338900' => 'mdo', 'MD07G1022800' => 'mdo', 'MD10G1047500' => 'mdo', 'MD10G1127500' => 'mdo', 'MD10G1262300' => 'mdo', 'MD10G1293800' => 'mdo', 'MD16G1074300' => 'mdo', 'Medtr1g021670' => 'mtr', 'Medtr1g096320' => 'mtr', 'Medtr2g013690' => 'mtr', 'Medtr2g019450' => 'mtr', 'Medtr2g085170' => 'mtr', 'Medtr4g088785' => 'mtr', 'Medtr8g055930' => 'mtr', 'Medtr8g085850' => 'mtr', 'MELO3C002605.2' => 'cme', 'MELO3C003891.2' => 'cme', 'MELO3C004012.2' => 'cme', 'MELO3C007134.2' => 'cme', 'MELO3C008118.2' => 'cme', 'MELO3C016700.2' => 'cme', 'MELO3C024127.2' => 'cme', 'MELO3C033361.2' => 'cme', 'MELO3C033362.2' => 'cme', 'Migut.C00430' => 'egut', 'Migut.C01246' => 'egut', 'Migut.E00101' => 'egut', 'Migut.H01486' => 'egut', 'Migut.H01939' => 'egut', 'Migut.K00360' => 'egut', 'Migut.M00910' => 'egut', 'Migut.M01139' => 'egut', 'Migut.N02677' => 'egut', 'MSTRG.13252' => 'ama', 'MSTRG.14701' => 'ama', 'MSTRG.1521' => 'ama', 'MSTRG.15884' => 'ama', 'MSTRG.16242' => 'ama', 'MSTRG.22285' => 'ama', 'MSTRG.22444' => 'ama', 'MSTRG.2349' => 'ama', 'MSTRG.26308' => 'ama', 'MSTRG.28296' => 'ama', 'MSTRG.9895' => 'ama', 'Nitab4.5_0000110g0060' => 'nta', 'Nitab4.5_0000420g0130' => 'nta', 'Nitab4.5_0000422g0030' => 'nta', 'Nitab4.5_0000560g0180' => 'nta', 'Nitab4.5_0000703g0100' => 'nta', 'Nitab4.5_0000786g0200' => 'nta', 'Nitab4.5_0001336g0020' => 'nta', 'Nitab4.5_0001796g0030' => 'nta', 'Nitab4.5_0003348g0060' => 'nta', 'Nitab4.5_0003698g0040' => 'nta', 'Nitab4.5_0003942g0090' => 'nta', 'Nitab4.5_0004775g0070' => 'nta', 'Nitab4.5_0004864g0030' => 'nta', 'Nitab4.5_0005615g0020' => 'nta', 'Nitab4.5_0009288g0030' => 'nta', 'Nitab4.5_0009341g0010' => 'nta', 'Nitab4.5_0009535g0010' => 'nta', 'Nn1g03995' => 'nnu', 'Nn1g04100' => 'nnu', 'Nn1g06530' => 'nnu', 'Nn3g16404' => 'nnu', 'Nn3g17212' => 'nnu', 'Nn3g20776' => 'nnu', 'Nn3g21923' => 'nnu', 'Nn5g27737' => 'nnu', 'Nn5g29461' => 'nnu', 'Nn7g38355' => 'nnu', 'Nn8g39873' => 'nnu', 'Oeu000548.2' => 'oeu', 'Oeu004672.1' => 'oeu', 'Oeu015605.2' => 'oeu', 'Oeu016092.1' => 'oeu', 'Oeu017879.3' => 'oeu', 'Oeu024910.1' => 'oeu', 'Oeu028965.1' => 'oeu', 'Oeu031269.1' => 'oeu', 'Oeu031270.1' => 'oeu', 'Oeu032535.1' => 'oeu', 'Oeu034151.1' => 'oeu', 'Oeu034152.1' => 'oeu', 'Oeu034588.2' => 'oeu', 'Oeu050846.1' => 'oeu', 'Oeu050849.2' => 'oeu', 'Oeu051063.2' => 'oeu', 'Oeu052368.1' => 'oeu', 'Oeu052370.1' => 'oeu', 'Os01g0210400' => 'osa', 'Os01g0304300' => 'osa', 'Os01g0749100' => 'osa', 'Os02g0745800' => 'osa', 'Os03g0769050' => 'osa', 'Os05g0531500' => 'osa', 'Os06g0724300' => 'osa', 'Os11g0198100' => 'osa', 'Peaxi162Scf00069g01425' => 'pax', 'Peaxi162Scf00280g00811' => 'pax', 'Peaxi162Scf00310g00615' => 'pax', 'Peaxi162Scf00362g00542' => 'pax', 'Peaxi162Scf00461g00310' => 'pax', 'Peaxi162Scf00530g00118' => 'pax', 'Peaxi162Scf00541g00057' => 'pax', 'Peaxi162Scf00661g00017' => 'pax', 'Peaxi162Scf00926g00027' => 'pax', 'Peaxi162Scf01064g00263' => 'pax', 'Peaxi162Scf01211g00135' => 'pax', 'PGR004G2336' => 'pgr', 'PGR042G0327' => 'pgr', 'PGR042G1957' => 'pgr', 'PGR042G2003' => 'pgr', 'PGR042G3929' => 'pgr', 'PGR083G1137' => 'pgr', 'PGR083G1364' => 'pgr', 'PGSC0003DMG400003381' => 'stu', 'PGSC0003DMG400003417' => 'stu', 'PGSC0003DMG400008981' => 'stu', 'PGSC0003DMG400012417' => 'stu', 'PGSC0003DMG400012823' => 'stu', 'PGSC0003DMG400016885' => 'stu', 'PGSC0003DMG400022812' => 'stu', 'PGSC0003DMG400029726' => 'stu', 'PGSC0003DMG401009243' => 'stu', 'PGSC0003DMG401031505' => 'stu', 'PGSC0003DMG402031505' => 'stu', 'Phvul.001G017600' => 'pvu', 'Phvul.002G193500' => 'pvu', 'Phvul.002G228900' => 'pvu', 'Phvul.002G236800' => 'pvu', 'Phvul.003G049500' => 'pvu', 'Phvul.005G072000' => 'pvu', 'Phvul.006G164800' => 'pvu', 'Phvul.006G185100' => 'pvu', 'Phvul.007G090000' => 'pvu', 'Potri.001G399800' => 'ptr', 'Potri.002G149900' => 'ptr', 'Potri.004G044100' => 'ptr', 'Potri.004G177600' => 'ptr', 'Potri.009G138000' => 'ptr', 'Potri.010G094000' => 'ptr', 'Potri.011G053000' => 'ptr', 'Potri.011G119300' => 'ptr', 'Potri.013G113700' => 'ptr', 'Potri.018G107800' => 'ptr', 'Potri.019G084100' => 'ptr', 'Pp3c14_23720' => 'ppa', 'Pp3c16_6340' => 'ppa', 'Pp3c23_13420' => 'ppa', 'Pp3c24_2740' => 'ppa', 'Pp3c25_860' => 'ppa', 'Pp3c8_21750' => 'ppa', 'Prupe.1G273000' => 'ppe', 'Prupe.1G273700' => 'ppe', 'Prupe.1G274100' => 'ppe', 'Prupe.2G023300' => 'ppe', 'Prupe.4G048000' => 'ppe', 'Prupe.4G080400' => 'ppe', 'Prupe.4G181200' => 'ppe', 'Prupe.8G056900' => 'ppe', 'Prupe.8G168700' => 'ppe', 'Psat1g189080' => 'psa', 'Psat1g204760' => 'psa', 'Psat4g175560' => 'psa', 'Psat4g177720' => 'psa', 'Psat5g244240' => 'psa', 'Psat6g010720' => 'psa', 'Psat6g187200' => 'psa', 'Psat7g072040' => 'psa', 'PSO017G3501' => 'pso', 'PSO063G2148' => 'pso', 'PSO063G5608' => 'pso', 'PSO210G6392' => 'pso', 'PSO541G2319' => 'pso', 'PSO541G2836' => 'pso', 'PSO541G4012' => 'pso', 'PSO541G6253' => 'pso', 'PSO675G0580' => 'pso', 'PSO675G0856' => 'pso', 'PSO675G5635' => 'pso', 'PSO675G9157' => 'pso', 'PSO832G1660' => 'pso', 'PSO832G1969' => 'pso', 'QL02p007186' => 'qlo', 'QL02p033904' => 'qlo', 'QL03p064391' => 'qlo', 'QL05p040593' => 'qlo', 'QL05p058242' => 'qlo', 'QL08p021825' => 'qlo', 'QL11p004981' => 'qlo', 'RcHm_v2.0_Chr1g0318301' => 'rch', 'RcHm_v2.0_Chr4g0418501' => 'rch', 'RcHm_v2.0_Chr4g0439971' => 'rch', 'RcHm_v2.0_Chr5g0008541' => 'rch', 'RcHm_v2.0_Chr5g0014101' => 'rch', 'RcHm_v2.0_Chr5g0014131' => 'rch', 'RcHm_v2.0_Chr5g0033621' => 'rch', 'RcHm_v2.0_Chr6g0272041' => 'rch', 'RcHm_v2.0_Chr6g0278831' => 'rch', 'Rhsim02G0130400' => 'rsi', 'Rhsim02G0171100' => 'rsi', 'Rhsim05G0053000' => 'rsi', 'Rhsim05G0053100' => 'rsi', 'Rhsim06G0096500' => 'rsi', 'Rhsim06G0096600' => 'rsi', 'Rhsim06G0199100' => 'rsi', 'Rhsim12G0062300' => 'rsi', 'Rhsim12G0062800' => 'rsi', 'Sabra02G0118600' => 'sbr', 'Sabra04G0027300' => 'sbr', 'Sabra04G0119500' => 'sbr', 'Sabra08G0112500' => 'sbr', 'Sabra11G0036800' => 'sbr', 'Sabra11G0103800' => 'sbr', 'Sabra13G0096300' => 'sbr', 'Sabra16G0262300' => 'sbr', 'Sabra18G0091700' => 'sbr', 'Sabra19G0095400' => 'sbr', 'SalBow6G3080' => 'sbo', 'SalBow7G1157' => 'sbo', 'SalBow7G2123' => 'sbo', 'SalBow7G2285' => 'sbo', 'SalBow7G3537' => 'sbo', 'SalBow8G2947' => 'sbo', 'SalBow8G4463' => 'sbo', 'SalBow8G5466' => 'sbo', 'Sc01g0001750' => 'sci', 'Sc02g0006640' => 'sci', 'Sc02g0006670' => 'sci', 'Sc04g0008220' => 'sci', 'Sc05g0006190' => 'sci', 'Sc08g0002760' => 'sci', 'Sc17g0006170' => 'sci', 'Sc22g0002050' => 'sci', 'Sc23g0001190' => 'sci', 'Sc24g0000980' => 'sci', 'Sed0006245' => 'sed', 'Sed0007543' => 'sed', 'Sed0009411' => 'sed', 'Sed0010765' => 'sed', 'Sed0012944' => 'sed', 'Sed0014682' => 'sed', 'Sed0016174' => 'sed', 'Sed0016796' => 'sed', 'Sed0020317' => 'sed', 'Sed0021467' => 'sed', 'SEGI_01316' => 'sgi', 'SEGI_03374' => 'sgi', 'SEGI_16265' => 'sgi', 'SEGI_18569' => 'sgi', 'SEGI_20351' => 'sgi', 'SEGI_26395' => 'sgi', 'SEGI_29469' => 'sgi', 'SEGI_34771' => 'sgi', 'SEGI_36769' => 'sgi', 'SEGI_37139' => 'sgi', 'SGA_v2.0_scaffold100G29687' => 'sas', 'SGA_v2.0_scaffold118G32472' => 'sas', 'SGA_v2.0_scaffold14G07051' => 'sas', 'SGA_v2.0_scaffold183G39845' => 'sas', 'SGA_v2.0_scaffold1G00174' => 'sas', 'SGA_v2.0_scaffold22G09714' => 'sas', 'SGA_v2.0_scaffold333G48992' => 'sas', 'SGA_v2.0_scaffold46G17491' => 'sas', 'SGA_v2.0_scaffold49G18294' => 'sas', 'SGA_v2.0_scaffold63G21658' => 'sas', 'SHI01741' => 'shi', 'SHI05771' => 'shi', 'SHI18077' => 'shi', 'SHI20525' => 'shi', 'SHI20527' => 'shi', 'SHI20528' => 'shi', 'SMO172G0185' => 'smo', 'SMO198G0020' => 'smo', 'SMO351G0006' => 'smo', 'SMO356G0118' => 'smo', 'SMO358G0296' => 'smo', 'SMO367G0079' => 'smo', 'SMO367G1277' => 'smo', 'Solyc01g014220.3' => 'sly', 'Solyc01g111770.2' => 'sly', 'Solyc02g078180.3' => 'sly', 'Solyc03g006430.3' => 'sly', 'Solyc03g006456.1' => 'sly', 'Solyc03g079860.2' => 'sly', 'Solyc04g079770.3' => 'sly', 'Solyc05g007430.4' => 'sly', 'Solyc07g063150.3' => 'sly', 'Solyc08g016620.3' => 'sly', 'Solyc09g057590.3' => 'sly', 'Solyc09g057600.1' => 'sly', 'Solyc10g009050.3' => 'sly', 'Solyc11g017420.2' => 'sly', 'Sopen01g053810' => 'spe', 'Sopen02g023040' => 'spe', 'Sopen03g002440' => 'spe', 'Sopen04g033350' => 'spe', 'Sopen05g003310' => 'spe', 'Sopen07g004050' => 'spe', 'Sopen07g031340' => 'spe', 'Sopen08g006990' => 'spe', 'Sopen10g004830' => 'spe', 'Sopen11g009370' => 'spe', 'Sp1g24450' => 'spa', 'Sp1g29670' => 'spa', 'Sp1g39600' => 'spa', 'Sp2g11080' => 'spa', 'Sp2g13970' => 'spa', 'Sp4g16130' => 'spa', 'Sp6g13080' => 'spa', 'Sp7g37270' => 'spa', 'TAR371G0065' => 'tar', 'TAR376G0340' => 'tar', 'TAR376G0435' => 'tar', 'TAR381G0002' => 'tar', 'TAR381G1236' => 'tar', 'TAR624G0055' => 'tar', 'TAR624G0324' => 'tar', 'TAR624G0696' => 'tar', 'TAR624G0906' => 'tar', 'TAR625G0107' => 'tar', 'TAR626G0015' => 'tar', 'TAR626G1356' => 'tar', 'TAR627G0888' => 'tar', 'TAR628G0399' => 'tar', 'TAR628G1327' => 'tar', 'TAR629G2831' => 'tar', 'TAR629G2874' => 'tar', 'TAR633G1432' => 'tar', 'TAR633G2771' => 'tar', 'THA.LOC104803394' => 'tha', 'THA.LOC104805153' => 'tha', 'THA.LOC104806784' => 'tha', 'THA.LOC104810473' => 'tha', 'THA.LOC104813100' => 'tha', 'THA.LOC104814215' => 'tha', 'THA.LOC104815554' => 'tha', 'THA.LOC104820544' => 'tha', 'THA.LOC104824754' => 'tha', 'THA.LOC104827717' => 'tha', 'Thecc.02G031400' => 'tca', 'Thecc.02G055900' => 'tca', 'Thecc.02G350800' => 'tca', 'Thecc.06G150900' => 'tca', 'Thecc.06G186600' => 'tca', 'Thecc.07G089600' => 'tca', 'Thecc.08G020400' => 'tca', 'Thecc.08G182100' => 'tca', 'Thhalv10000873m.g' => 'esa', 'Thhalv10004185m.g' => 'esa', 'Thhalv10006981m.g' => 'esa', 'Thhalv10007204m.g' => 'esa', 'Thhalv10011374m.g' => 'esa', 'Thhalv10013482m.g' => 'esa', 'Thhalv10017801m.g' => 'esa', 'Thhalv10024983m.g' => 'esa', 'TPR.G12072' => 'tpr', 'TPR.G15769' => 'tpr', 'TPR.G16504' => 'tpr', 'TPR.G16506' => 'tpr', 'TPR.G24345' => 'tpr', 'TPR.G26666' => 'tpr', 'TPR.G27320' => 'tpr', 'TPR.G31819' => 'tpr', 'TPR.G38879' => 'tpr', 'TPR.G39015' => 'tpr', 'TPR.G8819' => 'tpr', 'TWI09G0924' => 'twi', 'TWI12G0811' => 'twi', 'TWI12G1294' => 'twi', 'TWI31G0150' => 'twi', 'TWI36G1262' => 'twi', 'TWI38G1287' => 'twi', 'TWI38G1633' => 'twi', 'TWI38G1982' => 'twi', 'TWI39G0116' => 'twi', 'TWI60G1011' => 'twi', 'TWI63G0171' => 'twi', 'TWI73G0839' => 'twi', 'TWI79G1511' => 'twi', 'unitig_0.g915' => 'ugi', 'unitig_0.g916' => 'ugi', 'unitig_21.g20219' => 'ugi', 'unitig_21.g20416' => 'ugi', 'unitig_578.g16132' => 'ugi', 'unitig_578.g16718' => 'ugi', 'unitig_62.g23481' => 'ugi', 'unitig_744.g24535' => 'ugi', 'unitig_749.g13525' => 'ugi', 'vmacro01248' => 'vma', 'vmacro02290' => 'vma', 'vmacro10946' => 'vma', 'vmacro11865' => 'vma', 'vmacro12493' => 'vma', 'vmacro17322' => 'vma', 'vmacro21599' => 'vma', 'vmacro23041' => 'vma', 'VMungo0251G0004' => 'vmu', 'VMungo0251G2639' => 'vmu', 'VMungo0251G2967' => 'vmu', 'VMungo0540G0864' => 'vmu', 'VMungo0540G1569' => 'vmu', 'VMungo0647G0317' => 'vmu', 'VMungo0720G1373' => 'vmu', 'VMungo0720G1508' => 'vmu', 'VMungo1080G0485' => 'vmu', 'VMungo1215G3177' => 'vmu', 'Zm00001eb112600' => 'zma', 'Zm00001eb120220' => 'zma', 'Zm00001eb153240' => 'zma', 'Zm00001eb168880' => 'zma', 'Zm00001eb213920' => 'zma', 'Zm00001eb228280' => 'zma', 'Zm00001eb254580' => 'zma', 'Zm00001eb272180' => 'zma', 'Zm00001eb293190' => 'zma', 'Zm00001eb322930' => 'zma', 'Zm00001eb353360' => 'zma', 'Zm00001eb353390' => 'zma', 'Zm00001eb353430' => 'zma', 'Zm00001eb353440' => 'zma', 'Zm00001eb353780' => 'zma' ), 'gf_id' => 'HOM05D000499', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000499' ), 'data_identifier' => 'HOM05D000499', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000499', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1066', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p29780' => 'bna', 'A02p33180' => 'bna', 'A03p16470' => 'bna', 'A03p66010' => 'bna', 'A04p25970' => 'bna', 'A06p01270' => 'bna', 'A06p46080' => 'bna', 'A07p11400' => 'bna', 'A08p01840' => 'bna', 'A08p08230' => 'bna', 'A08p25740' => 'bna', 'A09p32070' => 'bna', 'A09p37830' => 'bna', 'A09p42840' => 'bna', 'A09p42850' => 'bna', 'Aa31LG10G2060' => 'aar', 'Aa31LG2G7410' => 'aar', 'Aa31LG6G10200' => 'aar', 'Aa31LG6G16680' => 'aar', 'Aa31LG6G8470' => 'aar', 'Aa31LG9G12730' => 'aar', 'Aa31LG9G13680' => 'aar', 'Aa31LG9G14920' => 'aar', 'Aa31LG9G6650' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4977' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5467' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3254' => 'aag', 'Actinidia02578' => 'ach', 'Actinidia07693' => 'ach', 'Actinidia08413' => 'ach', 'Actinidia08414' => 'ach', 'Actinidia15289' => 'ach', 'Actinidia19871' => 'ach', 'Actinidia21475' => 'ach', 'Actinidia22576' => 'ach', 'Actinidia28327' => 'ach', 'Actinidia32491' => 'ach', 'Actinidia39463' => 'ach', 'Actinidia39571' => 'ach', 'Ah.01g013750' => 'amhyb', 'Ah.01g023210' => 'amhyb', 'Ah.04g164850' => 'amhyb', 'Ah.05g178060' => 'amhyb', 'Ah.07g204270' => 'amhyb', 'Ah.07g208480' => 'amhyb', 'Ah.09g237410' => 'amhyb', 'Ah.14g089460' => 'amhyb', 'AL1G41790' => 'aly', 'AL1G49050' => 'aly', 'AL1G53810' => 'aly', 'AL1G61400' => 'aly', 'AL4G18580' => 'aly', 'AL5G12510' => 'aly', 'AL5G12540' => 'aly', 'AL6G43230' => 'aly', 'AL7G10370' => 'aly', 'AL7G19250' => 'aly', 'AL8G12240' => 'aly', 'AL8G18540' => 'aly', 'Aqoxy1G02409' => 'aox', 'Aqoxy2G03993' => 'aox', 'Aqoxy3G03357' => 'aox', 'Aqoxy4G00785' => 'aox', 'Aqoxy5G02598' => 'aox', 'Aqoxy6G00132' => 'aox', 'Aqoxy7G01776' => 'aox', 'Aqoxy7G02316' => 'aox', 'Aqoxy7G03973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.12AFKW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B8730' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27IQR1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3F75VG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3RE0GA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41TCQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.527VTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FIR39' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5W8UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DA38EV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ63HS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H1I32C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HC27T5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4M8AP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7N3CZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9UVDZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LS1NQA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT1D4B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SKC4TM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCFV76' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF9Q1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQWD9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1ZM88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WE07RT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YCK7VH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJE6Q6' => 'arhy', 'AT1G28240' => 'ath', 'AT1G34550' => 'ath', 'AT1G53040' => 'ath', 'AT2G02910' => 'ath', 'AT4G09630' => 'ath', 'AT4G38500' => 'ath', 'AT5G42660' => 'ath', 'AT5G46220' => 'ath', 'ATR0152G026' => 'atr', 'ATR0564G343' => 'atr', 'ATR0706G151' => 'atr', 'ATR0733G207' => 'atr', 'ATR0751G234' => 'atr', 'ATR0807G048' => 'atr', 'ATR1091G084' => 'atr', 'Atru.chr10.1229' => 'acertr', 'Atru.chr10.1230' => 'acertr', 'Atru.chr10.1874' => 'acertr', 'Atru.chr11.1808' => 'acertr', 'Atru.chr13.1795' => 'acertr', 'Atru.chr13.570' => 'acertr', 'Atru.chr2.2608' => 'acertr', 'Atru.chr2.2609' => 'acertr', 'Atru.chr5.3428' => 'acertr', 'Atru.chr8.1171' => 'acertr', 'AUR62004651' => 'cqu', 'AUR62008675' => 'cqu', 'AUR62010014' => 'cqu', 'AUR62013004' => 'cqu', 'AUR62014825' => 'cqu', 'AUR62015015' => 'cqu', 'AUR62015151' => 'cqu', 'AUR62017020' => 'cqu', 'AUR62019422' => 'cqu', 'AUR62023570' => 'cqu', 'AUR62025571' => 'cqu', 'AUR62029098' => 'cqu', 'AUR62033863' => 'cqu', 'AUR62034296' => 'cqu', 'AUR62040075' => 'cqu', 'BcaB02g07334' => 'bca', 'BcaB02g10575' => 'bca', 'BcaB03g12119' => 'bca', 'BcaB03g12120' => 'bca', 'BcaB03g13945' => 'bca', 'BcaB04g17123' => 'bca', 'BcaB04g17867' => 'bca', 'BcaB04g19839' => 'bca', 'BcaB07g30317' => 'bca', 'BcaB07g32432' => 'bca', 'BcaB07g33362' => 'bca', 'BcaB08g36611' => 'bca', 'BcaC01g00028' => 'bca', 'BcaC01g01356' => 'bca', 'BcaC01g02034' => 'bca', 'BcaC01g06051' => 'bca', 'BcaC03g16839' => 'bca', 'BcaC03g17176' => 'bca', 'BcaC05g26829' => 'bca', 'BcaC06g31490' => 'bca', 'BcaC06g35344' => 'bca', 'BcaC06g36570' => 'bca', 'BcaC07g37537' => 'bca', 'BcaC08g43491' => 'bca', 'BcaC08g43773' => 'bca', 'BcaNung00234' => 'bca', 'BcaNung01982' => 'bca', 'BcaNung03707' => 'bca', 'BcaNung06454' => 'bca', 'BolC2t10762H' => 'bol', 'BolC2t11191H' => 'bol', 'BolC3t14322H' => 'bol', 'BolC3t19747H' => 'bol', 'BolC3t21425H' => 'bol', 'BolC4t27800H' => 'bol', 'BolC5t31423H' => 'bol', 'BolC6t35951H' => 'bol', 'BolC6t36282H' => 'bol', 'BolC7t40678H' => 'bol', 'BolC7t40679H' => 'bol', 'BolC7t42222H' => 'bol', 'BolC7t43492H' => 'bol', 'BolC7t46785H' => 'bol', 'BolC8t47853H' => 'bol', 'BolC9t56805H' => 'bol', 'BraA02t08000Z' => 'bra', 'BraA02t08341Z' => 'bra', 'BraA03t10936Z' => 'bra', 'BraA03t15657Z' => 'bra', 'BraA04t18100Z' => 'bra', 'BraA05t20523Z' => 'bra', 'BraA06t23353Z' => 'bra', 'BraA06t27473Z' => 'bra', 'BraA06t27769Z' => 'bra', 'BraA07t28928Z' => 'bra', 'BraA08t32236Z' => 'bra', 'BraA08t32841Z' => 'bra', 'BraA08t34524Z' => 'bra', 'BraA09t38742Z' => 'bra', 'BraA09t39295Z' => 'bra', 'C02p47180' => 'bna', 'C02p50990' => 'bna', 'C03p19360' => 'bna', 'C03p74950' => 'bna', 'C03p91000' => 'bna', 'C04p63260' => 'bna', 'C05p27050' => 'bna', 'C06p08750' => 'bna', 'C06p11490' => 'bna', 'C07p02820' => 'bna', 'C07p17180' => 'bna', 'C07p29440' => 'bna', 'C07p63730' => 'bna', 'C09p39260' => 'bna', 'CAN.G1164.34' => 'can', 'CAN.G1164.39' => 'can', 'CAN.G1530.3' => 'can', 'CAN.G162.61' => 'can', 'CAN.G176.6' => 'can', 'CAN.G289.49' => 'can', 'CAN.G370.21' => 'can', 'CAN.G370.22' => 'can', 'CAN.G371.117' => 'can', 'CAN.G58.37' => 'can', 'CAN.G588.98' => 'can', 'CANSAT21G2266' => 'cansat', 'CANSAT25G2799' => 'cansat', 'CANSAT35G0862' => 'cansat', 'CANSAT35G1704' => 'cansat', 'CANSAT35G1760' => 'cansat', 'CANSAT56G3971' => 'cansat', 'CANSAT56G4116' => 'cansat', 'CANSAT80G1259' => 'cansat', 'CARHR027730' => 'chi', 'CARHR033880' => 'chi', 'CARHR043270' => 'chi', 'CARHR145330' => 'chi', 'CARHR145340' => 'chi', 'CARHR175570' => 'chi', 'CARHR181570' => 'chi', 'CARHR258470' => 'chi', 'CARHR260490' => 'chi', 'CARHR294220' => 'chi', 'Carub.0001s2668' => 'cru', 'Carub.0001s3257' => 'cru', 'Carub.0001s4220' => 'cru', 'Carub.0005s0179' => 'cru', 'Carub.0006s2807' => 'cru', 'Carub.0007s0039' => 'cru', 'Carub.0008s0169' => 'cru', 'Carub.0008s0636' => 'cru', 'Ca_00338_v3' => 'car', 'Ca_00542_v3' => 'car', 'Ca_01844_v3' => 'car', 'Ca_10611_v3' => 'car', 'Ca_13326_v3' => 'car', 'Ca_17944_v3' => 'car', 'Ca_18546_v3' => 'car', 'Ca_24219_v3' => 'car', 'Ca_29972_v3' => 'car', 'CBR_g3681' => 'cbr', 'CBR_g40021' => 'cbr', 'Cc01_g08140' => 'ccan', 'Cc02_g13410' => 'ccan', 'Cc02_g37480' => 'ccan', 'Cc05_g12030' => 'ccan', 'Cc09_g03370' => 'ccan', 'Cc09_g10300' => 'ccan', 'Cc10_g03530' => 'ccan', 'Cc10_g11380' => 'ccan', 'CDE01G0176' => 'cde', 'CDE02G0675' => 'cde', 'CDE02G0942' => 'cde', 'CDE02G1153' => 'cde', 'CDE02G4177' => 'cde', 'CDE04G2117' => 'cde', 'CDE04G2736' => 'cde', 'CDE08G1161' => 'cde', 'CDE09G1238' => 'cde', 'Cfa000467' => 'cfa', 'Cfa000947' => 'cfa', 'Cfa004969' => 'cfa', 'Cfa005284' => 'cfa', 'Cfa008993' => 'cfa', 'Cfa018187' => 'cfa', 'Cfa018454' => 'cfa', 'Cfa020585' => 'cfa', 'Ciclev10000424m.g' => 'ccl', 'Ciclev10003605m.g' => 'ccl', 'Ciclev10007828m.g' => 'ccl', 'Ciclev10014620m.g' => 'ccl', 'Ciclev10015169m.g' => 'ccl', 'Ciclev10018291m.g' => 'ccl', 'Ciclev10028256m.g' => 'ccl', 'Ciclev10033822m.g' => 'ccl', 'CiPaw.05G060300' => 'cil', 'CiPaw.05G085000' => 'cil', 'CiPaw.06G083700' => 'cil', 'CiPaw.06G120300' => 'cil', 'CiPaw.09G060500' => 'cil', 'CiPaw.09G123800' => 'cil', 'CiPaw.11G169700' => 'cil', 'CiPaw.12G118300' => 'cil', 'CiPaw.15G071000' => 'cil', 'CiPaw.15G081900' => 'cil', 'ClCG01G024610' => 'cla', 'ClCG03G006070' => 'cla', 'ClCG05G019250' => 'cla', 'ClCG09G009500' => 'cla', 'ClCG11G008200' => 'cla', 'ClCG11G018080' => 'cla', 'COL.COLO4_17373' => 'col', 'COL.COLO4_22994' => 'col', 'COL.COLO4_26389' => 'col', 'COL.COLO4_27170' => 'col', 'COL.COLO4_31074' => 'col', 'COL.COLO4_31465' => 'col', 'COL.COLO4_36438' => 'col', 'COL.COLO4_36439' => 'col', 'Cpa.g.c38781' => 'cpa', 'Cpa.g.sc128.12' => 'cpa', 'Cpa.g.sc166.7' => 'cpa', 'Cpa.g.sc166.8' => 'cpa', 'Cpa.g.sc20.111' => 'cpa', 'Cpa.g.sc27.31' => 'cpa', 'Cpa.g.sc64.36' => 'cpa', 'Cpa.g.sc64.37' => 'cpa', 'Cpa.g.sc66.49' => 'cpa', 'Cpa.g.sc80.64' => 'cpa', 'CsaV3_1G012320' => 'csa', 'CsaV3_2G008480' => 'csa', 'CsaV3_2G033450' => 'csa', 'CsaV3_3G044830' => 'csa', 'CsaV3_4G033710' => 'csa', 'CsaV3_6G051730' => 'csa', 'CsaV3_7G025350' => 'csa', 'CSS0001067' => 'camsi', 'CSS0005996' => 'camsi', 'CSS0006590' => 'camsi', 'CSS0009673' => 'camsi', 'CSS0010201' => 'camsi', 'CSS0010549' => 'camsi', 'CSS0011364' => 'camsi', 'CSS0014473' => 'camsi', 'CSS0014961' => 'camsi', 'CSS0020191' => 'camsi', 'CSS0021165' => 'camsi', 'CSS0022306' => 'camsi', 'CSS0030591' => 'camsi', 'CSS0030696' => 'camsi', 'CSS0032653' => 'camsi', 'CSS0037487' => 'camsi', 'CSS0041102' => 'camsi', 'CSS0041261' => 'camsi', 'CSS0046246' => 'camsi', 'CSS0049256' => 'camsi', 'DCAR_004075' => 'dca', 'DCAR_011538' => 'dca', 'DCAR_019553' => 'dca', 'DCAR_020952' => 'dca', 'DCAR_021739' => 'dca', 'DCAR_027407' => 'dca', 'DCAR_027913' => 'dca', 'DCAR_028066' => 'dca', 'Dinv05899' => 'din', 'Dinv07563' => 'din', 'Dinv08010' => 'din', 'Dinv14125' => 'din', 'Dinv20172' => 'din', 'Dinv30743' => 'din', 'Dinv31229' => 'din', 'Dinv34162' => 'din', 'Dinv36028' => 'din', 'Dinv39368' => 'din', 'Dinv40565' => 'din', 'Dinv41706' => 'din', 'Duzib052G0089' => 'dzi', 'Duzib116G0641' => 'dzi', 'Duzib132G0069' => 'dzi', 'Duzib132G1219' => 'dzi', 'Duzib147G0278' => 'dzi', 'Duzib160G0480' => 'dzi', 'Duzib170G0661' => 'dzi', 'Duzib177G0591' => 'dzi', 'Duzib187G1353' => 'dzi', 'Duzib192G0858' => 'dzi', 'Duzib192G0883' => 'dzi', 'Duzib213G0506' => 'dzi', 'Duzib235G0289' => 'dzi', 'Duzib251G0422' => 'dzi', 'ECA232G3898' => 'eca', 'ECA233G5950' => 'eca', 'ECA234G1699' => 'eca', 'ECA234G2421' => 'eca', 'ECA236G0426' => 'eca', 'ECA236G4331' => 'eca', 'ECA248G2573' => 'eca', 'EL10Ac1g00077' => 'bvu', 'EL10Ac1g01746' => 'bvu', 'EL10Ac2g03464' => 'bvu', 'EL10Ac4g08176' => 'bvu', 'EL10Ac7g17521' => 'bvu', 'EL10Ac8g20386' => 'bvu', 'EL10Ac9g21343' => 'bvu', 'EL10Ac9g22688' => 'bvu', 'Eucgr.B03434' => 'egr', 'Eucgr.D00618' => 'egr', 'Eucgr.E02395' => 'egr', 'Eucgr.F01129' => 'egr', 'Eucgr.F02622' => 'egr', 'Eucgr.F04207' => 'egr', 'FAN01G0570' => 'fan', 'FAN03G3351' => 'fan', 'FAN06G3702' => 'fan', 'FAN07G2149' => 'fan', 'FAN10G3758' => 'fan', 'FAN11G1170' => 'fan', 'FAN11G2050' => 'fan', 'FAN11G2724' => 'fan', 'FAN12G1700' => 'fan', 'FAN12G2028' => 'fan', 'FAN15G1160' => 'fan', 'FAN15G3063' => 'fan', 'FAN16G2540' => 'fan', 'FAN16G3077' => 'fan', 'FAN16G3624' => 'fan', 'FAN17G0221' => 'fan', 'FAN20G2492' => 'fan', 'FAN20G2905' => 'fan', 'FAN21G0548' => 'fan', 'FAN21G1300' => 'fan', 'FAN22G0077' => 'fan', 'FAN22G1315' => 'fan', 'FAN24G1280' => 'fan', 'FAN24G1445' => 'fan', 'FAN24G3527' => 'fan', 'FAN25G0464' => 'fan', 'FAN25G2885' => 'fan', 'FAN25G3270' => 'fan', 'FAN27G1101' => 'fan', 'FAN27G2846' => 'fan', 'FAN27G3524' => 'fan', 'FvH4_2g11770' => 'fve', 'FvH4_2g15630' => 'fve', 'FvH4_3g05570' => 'fve', 'FvH4_3g09110' => 'fve', 'FvH4_3g19940' => 'fve', 'FvH4_4g04821' => 'fve', 'FvH4_4g31480' => 'fve', 'FvH4_7g01740' => 'fve', 'Glyma.05G130400' => 'gma', 'Glyma.05G156400' => 'gma', 'Glyma.07G197000' => 'gma', 'Glyma.08G085151' => 'gma', 'Glyma.08G114500' => 'gma', 'Glyma.08G300400' => 'gma', 'Glyma.10G215800' => 'gma', 'Glyma.12G224400' => 'gma', 'Glyma.13G179300' => 'gma', 'Glyma.13G218151' => 'gma', 'Glyma.13G238800' => 'gma', 'Glyma.13G276900' => 'gma', 'Glyma.14G078200' => 'gma', 'Glyma.15G074500' => 'gma', 'Glyma.15G094100' => 'gma', 'Glyma.17G247200' => 'gma', 'Glyma.18G120100' => 'gma', 'Glyma.20G176000' => 'gma', 'Gohir.A01G063600' => 'ghi', 'Gohir.A01G170301' => 'ghi', 'Gohir.A02G060500' => 'ghi', 'Gohir.A05G133850' => 'ghi', 'Gohir.A05G161400' => 'ghi', 'Gohir.A06G012900' => 'ghi', 'Gohir.A06G035901' => 'ghi', 'Gohir.A06G127100' => 'ghi', 'Gohir.A06G210500' => 'ghi', 'Gohir.A08G008650' => 'ghi', 'Gohir.A09G072700' => 'ghi', 'Gohir.A09G088301' => 'ghi', 'Gohir.A10G040600' => 'ghi', 'Gohir.A12G036300' => 'ghi', 'Gohir.A12G143350' => 'ghi', 'Gohir.A12G165500' => 'ghi', 'Gohir.A13G145700' => 'ghi', 'Gohir.D01G050000' => 'ghi', 'Gohir.D01G051366' => 'ghi', 'Gohir.D01G161350' => 'ghi', 'Gohir.D02G065900' => 'ghi', 'Gohir.D05G164200' => 'ghi', 'Gohir.D05G355500' => 'ghi', 'Gohir.D06G010400' => 'ghi', 'Gohir.D06G111250' => 'ghi', 'Gohir.D06G132000' => 'ghi', 'Gohir.D06G210500' => 'ghi', 'Gohir.D07G165675' => 'ghi', 'Gohir.D08G062240' => 'ghi', 'Gohir.D08G086101' => 'ghi', 'Gohir.D08G138060' => 'ghi', 'Gohir.D09G072300' => 'ghi', 'Gohir.D10G041400' => 'ghi', 'Gohir.D11G191020' => 'ghi', 'Gohir.D11G212066' => 'ghi', 'Gohir.D12G036300' => 'ghi', 'Gohir.D12G168600' => 'ghi', 'Gohir.D13G150600' => 'ghi', 'Gorai.001G057300' => 'gra', 'Gorai.002G069900' => 'gra', 'Gorai.002G200000' => 'gra', 'Gorai.003G067600' => 'gra', 'Gorai.005G074800' => 'gra', 'Gorai.006G087300' => 'gra', 'Gorai.008G037500' => 'gra', 'Gorai.008G181400' => 'gra', 'Gorai.009G169400' => 'gra', 'Gorai.009G387900' => 'gra', 'Gorai.010G013300' => 'gra', 'Gorai.010G153800' => 'gra', 'Gorai.010G255800' => 'gra', 'Gorai.011G043700' => 'gra', 'Gorai.011G198900' => 'gra', 'Gorai.013G168400' => 'gra', 'GSVIVG01005212001' => 'vvi', 'GSVIVG01006163001' => 'vvi', 'GSVIVG01009625001' => 'vvi', 'GSVIVG01014338001' => 'vvi', 'GSVIVG01020005001' => 'vvi', 'GSVIVG01021450001' => 'vvi', 'GSVIVG01023975001' => 'vvi', 'GSVIVG01034490001' => 'vvi', 'HanXRQChr04g0112071' => 'han', 'HanXRQChr05g0131151' => 'han', 'HanXRQChr09g0262371' => 'han', 'HanXRQChr09g0268401' => 'han', 'HanXRQChr10g0279241' => 'han', 'HanXRQChr10g0297961' => 'han', 'HanXRQChr11g0326231' => 'han', 'HanXRQChr11g0328471' => 'han', 'HanXRQChr16g0507941' => 'han', 'HanXRQChr17g0560211' => 'han', 'Haze_02108' => 'cav', 'Haze_02428' => 'cav', 'Haze_05593' => 'cav', 'Haze_06448' => 'cav', 'Haze_09427' => 'cav', 'Haze_12022' => 'cav', 'Haze_17612' => 'cav', 'Haze_17928' => 'cav', 'Hma1.2p1_0032F.1_g019250' => 'hma', 'Hma1.2p1_0163F.1_g072690' => 'hma', 'Hma1.2p1_0265F.1_g106710' => 'hma', 'Hma1.2p1_0286F.1_g113970' => 'hma', 'Hma1.2p1_0363F.1_g136640' => 'hma', 'Hma1.2p1_0584F.1_g183470' => 'hma', 'Hma1.2p1_0885F.1_g232570' => 'hma', 'HPP92_006022' => 'vpl', 'HPP92_007320' => 'vpl', 'HPP92_011521' => 'vpl', 'HPP92_019387' => 'vpl', 'HPP92_024038' => 'vpl', 'Hund05891' => 'sun', 'Hund06450' => 'sun', 'Hund12053' => 'sun', 'Hund16800' => 'sun', 'Hund21222' => 'sun', 'Hund22896' => 'sun', 'Hund23746' => 'sun', 'Hund27083' => 'sun', 'Lalb_Chr02g0141831' => 'lal', 'Lalb_Chr02g0141841' => 'lal', 'Lalb_Chr05g0220411' => 'lal', 'Lalb_Chr06g0162081' => 'lal', 'Lalb_Chr09g0327651' => 'lal', 'Lalb_Chr13g0295051' => 'lal', 'Lalb_Chr15g0086801' => 'lal', 'Lalb_Chr16g0383781' => 'lal', 'Lalb_Chr16g0383791' => 'lal', 'Lalb_Chr18g0055441' => 'lal', 'Lalb_Chr18g0059611' => 'lal', 'Lalb_Chr20g0109661' => 'lal', 'Lalb_Chr20g0109831' => 'lal', 'Lalb_Chr20g0121871' => 'lal', 'Lalb_Chr22g0355361' => 'lal', 'Lalb_Chr25g0286371' => 'lal', 'Lj1A1187G43' => 'lonja', 'Lj1A1205T50' => 'lonja', 'Lj1A800G33' => 'lonja', 'Lj1C1187T7' => 'lonja', 'Lj1C843T11' => 'lonja', 'Lj1g0010940' => 'lja', 'Lj2A288T69' => 'lonja', 'Lj3g0024276' => 'lja', 'Lj4A47T76' => 'lonja', 'Lj4g0005805' => 'lja', 'Lj4g0006097' => 'lja', 'Lj4g0008528' => 'lja', 'Lj4g0024907' => 'lja', 'Lj5g0012472' => 'lja', 'Lj5g0018648' => 'lja', 'Lj6C789G1' => 'lonja', 'Lj6g0004000' => 'lja', 'Lj7A292G67' => 'lonja', 'Lj7A292T64' => 'lonja', 'Lj9A400T58' => 'lonja', 'Lsat_1_v5_gn_1_126181' => 'lsa', 'Lsat_1_v5_gn_4_123041' => 'lsa', 'Lsat_1_v5_gn_4_133620' => 'lsa', 'Lsat_1_v5_gn_4_53221' => 'lsa', 'Lsat_1_v5_gn_4_71961' => 'lsa', 'Lsat_1_v5_gn_7_105241' => 'lsa', 'Lsat_1_v5_gn_7_21361' => 'lsa', 'Lsat_1_v5_gn_7_28860' => 'lsa', 'Lsat_1_v5_gn_7_31260' => 'lsa', 'Lsat_1_v5_gn_8_52801' => 'lsa', 'Manes.02G191400' => 'mes', 'Manes.03G110100' => 'mes', 'Manes.04G071100' => 'mes', 'Manes.05G100500' => 'mes', 'Manes.05G164700' => 'mes', 'Manes.15G087000' => 'mes', 'Manes.15G121500' => 'mes', 'Manes.16G028300' => 'mes', 'Manes.17G046100' => 'mes', 'Manes.17G069800' => 'mes', 'Manes.18G100500' => 'mes', 'Mapoly0002s0109' => 'mpo', 'Mapoly0024s0007' => 'mpo', 'Mapoly0089s0032' => 'mpo', 'MBI04_g42241_MAGBIO' => 'mbi', 'MBI05_g11988_MAGBIO' => 'mbi', 'MBI05_g35452_MAGBIO' => 'mbi', 'MBI07_g30179_MAGBIO' => 'mbi', 'MBI07_g35859_MAGBIO' => 'mbi', 'MBI07_g35860_MAGBIO' => 'mbi', 'MBI07_g37166_MAGBIO' => 'mbi', 'MBI08_g18172_MAGBIO' => 'mbi', 'MBI09_g08441_MAGBIO' => 'mbi', 'MBI13_g01676_MAGBIO' => 'mbi', 'MBI14_g42955_MAGBIO' => 'mbi', 'MBI16_g13161_MAGBIO' => 'mbi', 'MBI17_g27204_MAGBIO' => 'mbi', 'MBI19_g21595_MAGBIO' => 'mbi', 'MD00G1148400' => 'mdo', 'MD02G1301200' => 'mdo', 'MD03G1227800' => 'mdo', 'MD05G1041100' => 'mdo', 'MD05G1124800' => 'mdo', 'MD05G1284000' => 'mdo', 'MD05G1338800' => 'mdo', 'MD05G1338900' => 'mdo', 'MD07G1022800' => 'mdo', 'MD10G1047500' => 'mdo', 'MD10G1127500' => 'mdo', 'MD10G1262300' => 'mdo', 'MD10G1293800' => 'mdo', 'MD16G1074300' => 'mdo', 'Medtr1g021670' => 'mtr', 'Medtr1g096320' => 'mtr', 'Medtr2g013690' => 'mtr', 'Medtr2g019450' => 'mtr', 'Medtr2g085170' => 'mtr', 'Medtr4g088785' => 'mtr', 'Medtr8g055930' => 'mtr', 'Medtr8g085850' => 'mtr', 'MELO3C002605.2' => 'cme', 'MELO3C003891.2' => 'cme', 'MELO3C004012.2' => 'cme', 'MELO3C007134.2' => 'cme', 'MELO3C008118.2' => 'cme', 'MELO3C016700.2' => 'cme', 'MELO3C024127.2' => 'cme', 'MELO3C033361.2' => 'cme', 'MELO3C033362.2' => 'cme', 'Migut.C00430' => 'egut', 'Migut.C01246' => 'egut', 'Migut.E00101' => 'egut', 'Migut.H01486' => 'egut', 'Migut.H01939' => 'egut', 'Migut.K00360' => 'egut', 'Migut.M00910' => 'egut', 'Migut.M01139' => 'egut', 'Migut.N02677' => 'egut', 'MSTRG.13252' => 'ama', 'MSTRG.14701' => 'ama', 'MSTRG.1521' => 'ama', 'MSTRG.15884' => 'ama', 'MSTRG.16242' => 'ama', 'MSTRG.22285' => 'ama', 'MSTRG.22444' => 'ama', 'MSTRG.2349' => 'ama', 'MSTRG.26308' => 'ama', 'MSTRG.28296' => 'ama', 'MSTRG.9895' => 'ama', 'Nitab4.5_0000110g0060' => 'nta', 'Nitab4.5_0000420g0130' => 'nta', 'Nitab4.5_0000422g0030' => 'nta', 'Nitab4.5_0000560g0180' => 'nta', 'Nitab4.5_0000703g0100' => 'nta', 'Nitab4.5_0000786g0200' => 'nta', 'Nitab4.5_0001336g0020' => 'nta', 'Nitab4.5_0001796g0030' => 'nta', 'Nitab4.5_0003348g0060' => 'nta', 'Nitab4.5_0003698g0040' => 'nta', 'Nitab4.5_0003942g0090' => 'nta', 'Nitab4.5_0004775g0070' => 'nta', 'Nitab4.5_0004864g0030' => 'nta', 'Nitab4.5_0005615g0020' => 'nta', 'Nitab4.5_0009288g0030' => 'nta', 'Nitab4.5_0009341g0010' => 'nta', 'Nitab4.5_0009535g0010' => 'nta', 'Nn1g03995' => 'nnu', 'Nn1g04100' => 'nnu', 'Nn1g06530' => 'nnu', 'Nn3g16404' => 'nnu', 'Nn3g17212' => 'nnu', 'Nn3g20776' => 'nnu', 'Nn3g21923' => 'nnu', 'Nn5g27737' => 'nnu', 'Nn5g29461' => 'nnu', 'Nn7g38355' => 'nnu', 'Nn8g39873' => 'nnu', 'Oeu000548.2' => 'oeu', 'Oeu004672.1' => 'oeu', 'Oeu015605.2' => 'oeu', 'Oeu016092.1' => 'oeu', 'Oeu017879.3' => 'oeu', 'Oeu024910.1' => 'oeu', 'Oeu028965.1' => 'oeu', 'Oeu031269.1' => 'oeu', 'Oeu031270.1' => 'oeu', 'Oeu032535.1' => 'oeu', 'Oeu034151.1' => 'oeu', 'Oeu034152.1' => 'oeu', 'Oeu034588.2' => 'oeu', 'Oeu050846.1' => 'oeu', 'Oeu050849.2' => 'oeu', 'Oeu051063.2' => 'oeu', 'Oeu052368.1' => 'oeu', 'Oeu052370.1' => 'oeu', 'Os01g0210400' => 'osa', 'Os01g0304300' => 'osa', 'Os01g0749100' => 'osa', 'Os02g0745800' => 'osa', 'Os03g0769050' => 'osa', 'Os05g0531500' => 'osa', 'Os06g0724300' => 'osa', 'Os11g0198100' => 'osa', 'Peaxi162Scf00069g01425' => 'pax', 'Peaxi162Scf00280g00811' => 'pax', 'Peaxi162Scf00310g00615' => 'pax', 'Peaxi162Scf00362g00542' => 'pax', 'Peaxi162Scf00461g00310' => 'pax', 'Peaxi162Scf00530g00118' => 'pax', 'Peaxi162Scf00541g00057' => 'pax', 'Peaxi162Scf00661g00017' => 'pax', 'Peaxi162Scf00926g00027' => 'pax', 'Peaxi162Scf01064g00263' => 'pax', 'Peaxi162Scf01211g00135' => 'pax', 'PGR004G2336' => 'pgr', 'PGR042G0327' => 'pgr', 'PGR042G1957' => 'pgr', 'PGR042G2003' => 'pgr', 'PGR042G3929' => 'pgr', 'PGR083G1137' => 'pgr', 'PGR083G1364' => 'pgr', 'PGSC0003DMG400003381' => 'stu', 'PGSC0003DMG400003417' => 'stu', 'PGSC0003DMG400008981' => 'stu', 'PGSC0003DMG400012417' => 'stu', 'PGSC0003DMG400012823' => 'stu', 'PGSC0003DMG400016885' => 'stu', 'PGSC0003DMG400022812' => 'stu', 'PGSC0003DMG400029726' => 'stu', 'PGSC0003DMG401009243' => 'stu', 'PGSC0003DMG401031505' => 'stu', 'PGSC0003DMG402031505' => 'stu', 'Phvul.001G017600' => 'pvu', 'Phvul.002G193500' => 'pvu', 'Phvul.002G228900' => 'pvu', 'Phvul.002G236800' => 'pvu', 'Phvul.003G049500' => 'pvu', 'Phvul.005G072000' => 'pvu', 'Phvul.006G164800' => 'pvu', 'Phvul.006G185100' => 'pvu', 'Phvul.007G090000' => 'pvu', 'Potri.001G399800' => 'ptr', 'Potri.002G149900' => 'ptr', 'Potri.004G044100' => 'ptr', 'Potri.004G177600' => 'ptr', 'Potri.009G138000' => 'ptr', 'Potri.010G094000' => 'ptr', 'Potri.011G053000' => 'ptr', 'Potri.011G119300' => 'ptr', 'Potri.013G113700' => 'ptr', 'Potri.018G107800' => 'ptr', 'Potri.019G084100' => 'ptr', 'Pp3c14_23720' => 'ppa', 'Pp3c16_6340' => 'ppa', 'Pp3c23_13420' => 'ppa', 'Pp3c24_2740' => 'ppa', 'Pp3c25_860' => 'ppa', 'Pp3c8_21750' => 'ppa', 'Prupe.1G273000' => 'ppe', 'Prupe.1G273700' => 'ppe', 'Prupe.1G274100' => 'ppe', 'Prupe.2G023300' => 'ppe', 'Prupe.4G048000' => 'ppe', 'Prupe.4G080400' => 'ppe', 'Prupe.4G181200' => 'ppe', 'Prupe.8G056900' => 'ppe', 'Prupe.8G168700' => 'ppe', 'Psat1g189080' => 'psa', 'Psat1g204760' => 'psa', 'Psat4g175560' => 'psa', 'Psat4g177720' => 'psa', 'Psat5g244240' => 'psa', 'Psat6g010720' => 'psa', 'Psat6g187200' => 'psa', 'Psat7g072040' => 'psa', 'PSO017G3501' => 'pso', 'PSO063G2148' => 'pso', 'PSO063G5608' => 'pso', 'PSO210G6392' => 'pso', 'PSO541G2319' => 'pso', 'PSO541G2836' => 'pso', 'PSO541G4012' => 'pso', 'PSO541G6253' => 'pso', 'PSO675G0580' => 'pso', 'PSO675G0856' => 'pso', 'PSO675G5635' => 'pso', 'PSO675G9157' => 'pso', 'PSO832G1660' => 'pso', 'PSO832G1969' => 'pso', 'QL02p007186' => 'qlo', 'QL02p033904' => 'qlo', 'QL03p064391' => 'qlo', 'QL05p040593' => 'qlo', 'QL05p058242' => 'qlo', 'QL08p021825' => 'qlo', 'QL11p004981' => 'qlo', 'RcHm_v2.0_Chr1g0318301' => 'rch', 'RcHm_v2.0_Chr4g0418501' => 'rch', 'RcHm_v2.0_Chr4g0439971' => 'rch', 'RcHm_v2.0_Chr5g0008541' => 'rch', 'RcHm_v2.0_Chr5g0014101' => 'rch', 'RcHm_v2.0_Chr5g0014131' => 'rch', 'RcHm_v2.0_Chr5g0033621' => 'rch', 'RcHm_v2.0_Chr6g0272041' => 'rch', 'RcHm_v2.0_Chr6g0278831' => 'rch', 'Rhsim02G0130400' => 'rsi', 'Rhsim02G0171100' => 'rsi', 'Rhsim05G0053000' => 'rsi', 'Rhsim05G0053100' => 'rsi', 'Rhsim06G0096500' => 'rsi', 'Rhsim06G0096600' => 'rsi', 'Rhsim06G0199100' => 'rsi', 'Rhsim12G0062300' => 'rsi', 'Rhsim12G0062800' => 'rsi', 'Sabra02G0118600' => 'sbr', 'Sabra04G0027300' => 'sbr', 'Sabra04G0119500' => 'sbr', 'Sabra08G0112500' => 'sbr', 'Sabra11G0036800' => 'sbr', 'Sabra11G0103800' => 'sbr', 'Sabra13G0096300' => 'sbr', 'Sabra16G0262300' => 'sbr', 'Sabra18G0091700' => 'sbr', 'Sabra19G0095400' => 'sbr', 'SalBow6G3080' => 'sbo', 'SalBow7G1157' => 'sbo', 'SalBow7G2123' => 'sbo', 'SalBow7G2285' => 'sbo', 'SalBow7G3537' => 'sbo', 'SalBow8G2947' => 'sbo', 'SalBow8G4463' => 'sbo', 'SalBow8G5466' => 'sbo', 'Sc01g0001750' => 'sci', 'Sc02g0006640' => 'sci', 'Sc02g0006670' => 'sci', 'Sc04g0008220' => 'sci', 'Sc05g0006190' => 'sci', 'Sc08g0002760' => 'sci', 'Sc17g0006170' => 'sci', 'Sc22g0002050' => 'sci', 'Sc23g0001190' => 'sci', 'Sc24g0000980' => 'sci', 'Sed0006245' => 'sed', 'Sed0007543' => 'sed', 'Sed0009411' => 'sed', 'Sed0010765' => 'sed', 'Sed0012944' => 'sed', 'Sed0014682' => 'sed', 'Sed0016174' => 'sed', 'Sed0016796' => 'sed', 'Sed0020317' => 'sed', 'Sed0021467' => 'sed', 'SEGI_01316' => 'sgi', 'SEGI_03374' => 'sgi', 'SEGI_16265' => 'sgi', 'SEGI_18569' => 'sgi', 'SEGI_20351' => 'sgi', 'SEGI_26395' => 'sgi', 'SEGI_29469' => 'sgi', 'SEGI_34771' => 'sgi', 'SEGI_36769' => 'sgi', 'SEGI_37139' => 'sgi', 'SGA_v2.0_scaffold100G29687' => 'sas', 'SGA_v2.0_scaffold118G32472' => 'sas', 'SGA_v2.0_scaffold14G07051' => 'sas', 'SGA_v2.0_scaffold183G39845' => 'sas', 'SGA_v2.0_scaffold1G00174' => 'sas', 'SGA_v2.0_scaffold22G09714' => 'sas', 'SGA_v2.0_scaffold333G48992' => 'sas', 'SGA_v2.0_scaffold46G17491' => 'sas', 'SGA_v2.0_scaffold49G18294' => 'sas', 'SGA_v2.0_scaffold63G21658' => 'sas', 'SHI01741' => 'shi', 'SHI05771' => 'shi', 'SHI18077' => 'shi', 'SHI20525' => 'shi', 'SHI20527' => 'shi', 'SHI20528' => 'shi', 'SMO172G0185' => 'smo', 'SMO198G0020' => 'smo', 'SMO351G0006' => 'smo', 'SMO356G0118' => 'smo', 'SMO358G0296' => 'smo', 'SMO367G0079' => 'smo', 'SMO367G1277' => 'smo', 'Solyc01g014220.3' => 'sly', 'Solyc01g111770.2' => 'sly', 'Solyc02g078180.3' => 'sly', 'Solyc03g006430.3' => 'sly', 'Solyc03g006456.1' => 'sly', 'Solyc03g079860.2' => 'sly', 'Solyc04g079770.3' => 'sly', 'Solyc05g007430.4' => 'sly', 'Solyc07g063150.3' => 'sly', 'Solyc08g016620.3' => 'sly', 'Solyc09g057590.3' => 'sly', 'Solyc09g057600.1' => 'sly', 'Solyc10g009050.3' => 'sly', 'Solyc11g017420.2' => 'sly', 'Sopen01g053810' => 'spe', 'Sopen02g023040' => 'spe', 'Sopen03g002440' => 'spe', 'Sopen04g033350' => 'spe', 'Sopen05g003310' => 'spe', 'Sopen07g004050' => 'spe', 'Sopen07g031340' => 'spe', 'Sopen08g006990' => 'spe', 'Sopen10g004830' => 'spe', 'Sopen11g009370' => 'spe', 'Sp1g24450' => 'spa', 'Sp1g29670' => 'spa', 'Sp1g39600' => 'spa', 'Sp2g11080' => 'spa', 'Sp2g13970' => 'spa', 'Sp4g16130' => 'spa', 'Sp6g13080' => 'spa', 'Sp7g37270' => 'spa', 'TAR371G0065' => 'tar', 'TAR376G0340' => 'tar', 'TAR376G0435' => 'tar', 'TAR381G0002' => 'tar', 'TAR381G1236' => 'tar', 'TAR624G0055' => 'tar', 'TAR624G0324' => 'tar', 'TAR624G0696' => 'tar', 'TAR624G0906' => 'tar', 'TAR625G0107' => 'tar', 'TAR626G0015' => 'tar', 'TAR626G1356' => 'tar', 'TAR627G0888' => 'tar', 'TAR628G0399' => 'tar', 'TAR628G1327' => 'tar', 'TAR629G2831' => 'tar', 'TAR629G2874' => 'tar', 'TAR633G1432' => 'tar', 'TAR633G2771' => 'tar', 'THA.LOC104803394' => 'tha', 'THA.LOC104805153' => 'tha', 'THA.LOC104806784' => 'tha', 'THA.LOC104810473' => 'tha', 'THA.LOC104813100' => 'tha', 'THA.LOC104814215' => 'tha', 'THA.LOC104815554' => 'tha', 'THA.LOC104820544' => 'tha', 'THA.LOC104824754' => 'tha', 'THA.LOC104827717' => 'tha', 'Thecc.02G031400' => 'tca', 'Thecc.02G055900' => 'tca', 'Thecc.02G350800' => 'tca', 'Thecc.06G150900' => 'tca', 'Thecc.06G186600' => 'tca', 'Thecc.07G089600' => 'tca', 'Thecc.08G020400' => 'tca', 'Thecc.08G182100' => 'tca', 'Thhalv10000873m.g' => 'esa', 'Thhalv10004185m.g' => 'esa', 'Thhalv10006981m.g' => 'esa', 'Thhalv10007204m.g' => 'esa', 'Thhalv10011374m.g' => 'esa', 'Thhalv10013482m.g' => 'esa', 'Thhalv10017801m.g' => 'esa', 'Thhalv10024983m.g' => 'esa', 'TPR.G12072' => 'tpr', 'TPR.G15769' => 'tpr', 'TPR.G16504' => 'tpr', 'TPR.G16506' => 'tpr', 'TPR.G24345' => 'tpr', 'TPR.G26666' => 'tpr', 'TPR.G27320' => 'tpr', 'TPR.G31819' => 'tpr', 'TPR.G38879' => 'tpr', 'TPR.G39015' => 'tpr', 'TPR.G8819' => 'tpr', 'TWI09G0924' => 'twi', 'TWI12G0811' => 'twi', 'TWI12G1294' => 'twi', 'TWI31G0150' => 'twi', 'TWI36G1262' => 'twi', 'TWI38G1287' => 'twi', 'TWI38G1633' => 'twi', 'TWI38G1982' => 'twi', 'TWI39G0116' => 'twi', 'TWI60G1011' => 'twi', 'TWI63G0171' => 'twi', 'TWI73G0839' => 'twi', 'TWI79G1511' => 'twi', 'unitig_0.g915' => 'ugi', 'unitig_0.g916' => 'ugi', 'unitig_21.g20219' => 'ugi', 'unitig_21.g20416' => 'ugi', 'unitig_578.g16132' => 'ugi', 'unitig_578.g16718' => 'ugi', 'unitig_62.g23481' => 'ugi', 'unitig_744.g24535' => 'ugi', 'unitig_749.g13525' => 'ugi', 'vmacro01248' => 'vma', 'vmacro02290' => 'vma', 'vmacro10946' => 'vma', 'vmacro11865' => 'vma', 'vmacro12493' => 'vma', 'vmacro17322' => 'vma', 'vmacro21599' => 'vma', 'vmacro23041' => 'vma', 'VMungo0251G0004' => 'vmu', 'VMungo0251G2639' => 'vmu', 'VMungo0251G2967' => 'vmu', 'VMungo0540G0864' => 'vmu', 'VMungo0540G1569' => 'vmu', 'VMungo0647G0317' => 'vmu', 'VMungo0720G1373' => 'vmu', 'VMungo0720G1508' => 'vmu', 'VMungo1080G0485' => 'vmu', 'VMungo1215G3177' => 'vmu', 'Zm00001eb112600' => 'zma', 'Zm00001eb120220' => 'zma', 'Zm00001eb153240' => 'zma', 'Zm00001eb168880' => 'zma', 'Zm00001eb213920' => 'zma', 'Zm00001eb228280' => 'zma', 'Zm00001eb254580' => 'zma', 'Zm00001eb272180' => 'zma', 'Zm00001eb293190' => 'zma', 'Zm00001eb322930' => 'zma', 'Zm00001eb353360' => 'zma', 'Zm00001eb353390' => 'zma', 'Zm00001eb353430' => 'zma', 'Zm00001eb353440' => 'zma', 'Zm00001eb353780' => 'zma' ) $gf_id = 'HOM05D000499' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000499' ) $data_identifier = 'HOM05D000499' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 29, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 12, 'amhyb' => (int) 8, 'aly' => (int) 12, 'aox' => (int) 9, 'arhy' => (int) 26, 'ath' => (int) 8, 'atr' => (int) 7, 'acertr' => (int) 10, 'cqu' => (int) 15, 'bca' => (int) 29, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 11, 'cansat' => (int) 8, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 9, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 8, 'cpa' => (int) 10, 'csa' => (int) 7, 'camsi' => (int) 20, 'dca' => (int) 8, 'din' => (int) 12, 'dzi' => (int) 14, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 6, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 38, 'gra' => (int) 16, 'vvi' => (int) 8, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 5, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 11, 'lja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 11, 'mpo' => (int) 3, 'mbi' => (int) 14, 'mdo' => (int) 14, 'mtr' => (int) 8, 'cme' => (int) 9, 'egut' => (int) 9, 'ama' => (int) 11, 'nta' => (int) 17, 'nnu' => (int) 11, 'oeu' => (int) 18, 'osa' => (int) 8, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 6, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 9, 'rsi' => (int) 9, 'sbr' => (int) 10, 'sbo' => (int) 8, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 10, 'sas' => (int) 10, 'shi' => (int) 6, 'smo' => (int) 7, 'sly' => (int) 14, 'spe' => (int) 10, 'spa' => (int) 8, 'tar' => (int) 19, 'tha' => (int) 10, 'tca' => (int) 8, 'esa' => (int) 8, 'tpr' => (int) 11, 'twi' => (int) 13, 'ugi' => (int) 9, 'vma' => (int) 8, 'vmu' => (int) 10, 'zma' => (int) 15 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb353780' $species_info = array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ) $local_species = 'vpl' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000499', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1066', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p29780' => 'bna', 'A02p33180' => 'bna', 'A03p16470' => 'bna', 'A03p66010' => 'bna', 'A04p25970' => 'bna', 'A06p01270' => 'bna', 'A06p46080' => 'bna', 'A07p11400' => 'bna', 'A08p01840' => 'bna', 'A08p08230' => 'bna', 'A08p25740' => 'bna', 'A09p32070' => 'bna', 'A09p37830' => 'bna', 'A09p42840' => 'bna', 'A09p42850' => 'bna', 'Aa31LG10G2060' => 'aar', 'Aa31LG2G7410' => 'aar', 'Aa31LG6G10200' => 'aar', 'Aa31LG6G16680' => 'aar', 'Aa31LG6G8470' => 'aar', 'Aa31LG9G12730' => 'aar', 'Aa31LG9G13680' => 'aar', 'Aa31LG9G14920' => 'aar', 'Aa31LG9G6650' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4977' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5467' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3254' => 'aag', 'Actinidia02578' => 'ach', 'Actinidia07693' => 'ach', 'Actinidia08413' => 'ach', 'Actinidia08414' => 'ach', 'Actinidia15289' => 'ach', 'Actinidia19871' => 'ach', 'Actinidia21475' => 'ach', 'Actinidia22576' => 'ach', 'Actinidia28327' => 'ach', 'Actinidia32491' => 'ach', 'Actinidia39463' => 'ach', 'Actinidia39571' => 'ach', 'Ah.01g013750' => 'amhyb', 'Ah.01g023210' => 'amhyb', 'Ah.04g164850' => 'amhyb', 'Ah.05g178060' => 'amhyb', 'Ah.07g204270' => 'amhyb', 'Ah.07g208480' => 'amhyb', 'Ah.09g237410' => 'amhyb', 'Ah.14g089460' => 'amhyb', 'AL1G41790' => 'aly', 'AL1G49050' => 'aly', 'AL1G53810' => 'aly', 'AL1G61400' => 'aly', 'AL4G18580' => 'aly', 'AL5G12510' => 'aly', 'AL5G12540' => 'aly', 'AL6G43230' => 'aly', 'AL7G10370' => 'aly', 'AL7G19250' => 'aly', 'AL8G12240' => 'aly', 'AL8G18540' => 'aly', 'Aqoxy1G02409' => 'aox', 'Aqoxy2G03993' => 'aox', 'Aqoxy3G03357' => 'aox', 'Aqoxy4G00785' => 'aox', 'Aqoxy5G02598' => 'aox', 'Aqoxy6G00132' => 'aox', 'Aqoxy7G01776' => 'aox', 'Aqoxy7G02316' => 'aox', 'Aqoxy7G03973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.12AFKW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B8730' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27IQR1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3F75VG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3RE0GA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41TCQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.527VTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FIR39' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5W8UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DA38EV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ63HS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H1I32C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HC27T5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4M8AP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7N3CZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9UVDZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LS1NQA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT1D4B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SKC4TM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCFV76' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF9Q1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQWD9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1ZM88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WE07RT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YCK7VH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJE6Q6' => 'arhy', 'AT1G28240' => 'ath', 'AT1G34550' => 'ath', 'AT1G53040' => 'ath', 'AT2G02910' => 'ath', 'AT4G09630' => 'ath', 'AT4G38500' => 'ath', 'AT5G42660' => 'ath', 'AT5G46220' => 'ath', 'ATR0152G026' => 'atr', 'ATR0564G343' => 'atr', 'ATR0706G151' => 'atr', 'ATR0733G207' => 'atr', 'ATR0751G234' => 'atr', 'ATR0807G048' => 'atr', 'ATR1091G084' => 'atr', 'Atru.chr10.1229' => 'acertr', 'Atru.chr10.1230' => 'acertr', 'Atru.chr10.1874' => 'acertr', 'Atru.chr11.1808' => 'acertr', 'Atru.chr13.1795' => 'acertr', 'Atru.chr13.570' => 'acertr', 'Atru.chr2.2608' => 'acertr', 'Atru.chr2.2609' => 'acertr', 'Atru.chr5.3428' => 'acertr', 'Atru.chr8.1171' => 'acertr', 'AUR62004651' => 'cqu', 'AUR62008675' => 'cqu', 'AUR62010014' => 'cqu', 'AUR62013004' => 'cqu', 'AUR62014825' => 'cqu', 'AUR62015015' => 'cqu', 'AUR62015151' => 'cqu', 'AUR62017020' => 'cqu', 'AUR62019422' => 'cqu', 'AUR62023570' => 'cqu', 'AUR62025571' => 'cqu', 'AUR62029098' => 'cqu', 'AUR62033863' => 'cqu', 'AUR62034296' => 'cqu', 'AUR62040075' => 'cqu', 'BcaB02g07334' => 'bca', 'BcaB02g10575' => 'bca', 'BcaB03g12119' => 'bca', 'BcaB03g12120' => 'bca', 'BcaB03g13945' => 'bca', 'BcaB04g17123' => 'bca', 'BcaB04g17867' => 'bca', 'BcaB04g19839' => 'bca', 'BcaB07g30317' => 'bca', 'BcaB07g32432' => 'bca', 'BcaB07g33362' => 'bca', 'BcaB08g36611' => 'bca', 'BcaC01g00028' => 'bca', 'BcaC01g01356' => 'bca', 'BcaC01g02034' => 'bca', 'BcaC01g06051' => 'bca', 'BcaC03g16839' => 'bca', 'BcaC03g17176' => 'bca', 'BcaC05g26829' => 'bca', 'BcaC06g31490' => 'bca', 'BcaC06g35344' => 'bca', 'BcaC06g36570' => 'bca', 'BcaC07g37537' => 'bca', 'BcaC08g43491' => 'bca', 'BcaC08g43773' => 'bca', 'BcaNung00234' => 'bca', 'BcaNung01982' => 'bca', 'BcaNung03707' => 'bca', 'BcaNung06454' => 'bca', 'BolC2t10762H' => 'bol', 'BolC2t11191H' => 'bol', 'BolC3t14322H' => 'bol', 'BolC3t19747H' => 'bol', 'BolC3t21425H' => 'bol', 'BolC4t27800H' => 'bol', 'BolC5t31423H' => 'bol', 'BolC6t35951H' => 'bol', 'BolC6t36282H' => 'bol', 'BolC7t40678H' => 'bol', 'BolC7t40679H' => 'bol', 'BolC7t42222H' => 'bol', 'BolC7t43492H' => 'bol', 'BolC7t46785H' => 'bol', 'BolC8t47853H' => 'bol', 'BolC9t56805H' => 'bol', 'BraA02t08000Z' => 'bra', 'BraA02t08341Z' => 'bra', 'BraA03t10936Z' => 'bra', 'BraA03t15657Z' => 'bra', 'BraA04t18100Z' => 'bra', 'BraA05t20523Z' => 'bra', 'BraA06t23353Z' => 'bra', 'BraA06t27473Z' => 'bra', 'BraA06t27769Z' => 'bra', 'BraA07t28928Z' => 'bra', 'BraA08t32236Z' => 'bra', 'BraA08t32841Z' => 'bra', 'BraA08t34524Z' => 'bra', 'BraA09t38742Z' => 'bra', 'BraA09t39295Z' => 'bra', 'C02p47180' => 'bna', 'C02p50990' => 'bna', 'C03p19360' => 'bna', 'C03p74950' => 'bna', 'C03p91000' => 'bna', 'C04p63260' => 'bna', 'C05p27050' => 'bna', 'C06p08750' => 'bna', 'C06p11490' => 'bna', 'C07p02820' => 'bna', 'C07p17180' => 'bna', 'C07p29440' => 'bna', 'C07p63730' => 'bna', 'C09p39260' => 'bna', 'CAN.G1164.34' => 'can', 'CAN.G1164.39' => 'can', 'CAN.G1530.3' => 'can', 'CAN.G162.61' => 'can', 'CAN.G176.6' => 'can', 'CAN.G289.49' => 'can', 'CAN.G370.21' => 'can', 'CAN.G370.22' => 'can', 'CAN.G371.117' => 'can', 'CAN.G58.37' => 'can', 'CAN.G588.98' => 'can', 'CANSAT21G2266' => 'cansat', 'CANSAT25G2799' => 'cansat', 'CANSAT35G0862' => 'cansat', 'CANSAT35G1704' => 'cansat', 'CANSAT35G1760' => 'cansat', 'CANSAT56G3971' => 'cansat', 'CANSAT56G4116' => 'cansat', 'CANSAT80G1259' => 'cansat', 'CARHR027730' => 'chi', 'CARHR033880' => 'chi', 'CARHR043270' => 'chi', 'CARHR145330' => 'chi', 'CARHR145340' => 'chi', 'CARHR175570' => 'chi', 'CARHR181570' => 'chi', 'CARHR258470' => 'chi', 'CARHR260490' => 'chi', 'CARHR294220' => 'chi', 'Carub.0001s2668' => 'cru', 'Carub.0001s3257' => 'cru', 'Carub.0001s4220' => 'cru', 'Carub.0005s0179' => 'cru', 'Carub.0006s2807' => 'cru', 'Carub.0007s0039' => 'cru', 'Carub.0008s0169' => 'cru', 'Carub.0008s0636' => 'cru', 'Ca_00338_v3' => 'car', 'Ca_00542_v3' => 'car', 'Ca_01844_v3' => 'car', 'Ca_10611_v3' => 'car', 'Ca_13326_v3' => 'car', 'Ca_17944_v3' => 'car', 'Ca_18546_v3' => 'car', 'Ca_24219_v3' => 'car', 'Ca_29972_v3' => 'car', 'CBR_g3681' => 'cbr', 'CBR_g40021' => 'cbr', 'Cc01_g08140' => 'ccan', 'Cc02_g13410' => 'ccan', 'Cc02_g37480' => 'ccan', 'Cc05_g12030' => 'ccan', 'Cc09_g03370' => 'ccan', 'Cc09_g10300' => 'ccan', 'Cc10_g03530' => 'ccan', 'Cc10_g11380' => 'ccan', 'CDE01G0176' => 'cde', 'CDE02G0675' => 'cde', 'CDE02G0942' => 'cde', 'CDE02G1153' => 'cde', 'CDE02G4177' => 'cde', 'CDE04G2117' => 'cde', 'CDE04G2736' => 'cde', 'CDE08G1161' => 'cde', 'CDE09G1238' => 'cde', 'Cfa000467' => 'cfa', 'Cfa000947' => 'cfa', 'Cfa004969' => 'cfa', 'Cfa005284' => 'cfa', 'Cfa008993' => 'cfa', 'Cfa018187' => 'cfa', 'Cfa018454' => 'cfa', 'Cfa020585' => 'cfa', 'Ciclev10000424m.g' => 'ccl', 'Ciclev10003605m.g' => 'ccl', 'Ciclev10007828m.g' => 'ccl', 'Ciclev10014620m.g' => 'ccl', 'Ciclev10015169m.g' => 'ccl', 'Ciclev10018291m.g' => 'ccl', 'Ciclev10028256m.g' => 'ccl', 'Ciclev10033822m.g' => 'ccl', 'CiPaw.05G060300' => 'cil', 'CiPaw.05G085000' => 'cil', 'CiPaw.06G083700' => 'cil', 'CiPaw.06G120300' => 'cil', 'CiPaw.09G060500' => 'cil', 'CiPaw.09G123800' => 'cil', 'CiPaw.11G169700' => 'cil', 'CiPaw.12G118300' => 'cil', 'CiPaw.15G071000' => 'cil', 'CiPaw.15G081900' => 'cil', 'ClCG01G024610' => 'cla', 'ClCG03G006070' => 'cla', 'ClCG05G019250' => 'cla', 'ClCG09G009500' => 'cla', 'ClCG11G008200' => 'cla', 'ClCG11G018080' => 'cla', 'COL.COLO4_17373' => 'col', 'COL.COLO4_22994' => 'col', 'COL.COLO4_26389' => 'col', 'COL.COLO4_27170' => 'col', 'COL.COLO4_31074' => 'col', 'COL.COLO4_31465' => 'col', 'COL.COLO4_36438' => 'col', 'COL.COLO4_36439' => 'col', 'Cpa.g.c38781' => 'cpa', 'Cpa.g.sc128.12' => 'cpa', 'Cpa.g.sc166.7' => 'cpa', 'Cpa.g.sc166.8' => 'cpa', 'Cpa.g.sc20.111' => 'cpa', 'Cpa.g.sc27.31' => 'cpa', 'Cpa.g.sc64.36' => 'cpa', 'Cpa.g.sc64.37' => 'cpa', 'Cpa.g.sc66.49' => 'cpa', 'Cpa.g.sc80.64' => 'cpa', 'CsaV3_1G012320' => 'csa', 'CsaV3_2G008480' => 'csa', 'CsaV3_2G033450' => 'csa', 'CsaV3_3G044830' => 'csa', 'CsaV3_4G033710' => 'csa', 'CsaV3_6G051730' => 'csa', 'CsaV3_7G025350' => 'csa', 'CSS0001067' => 'camsi', 'CSS0005996' => 'camsi', 'CSS0006590' => 'camsi', 'CSS0009673' => 'camsi', 'CSS0010201' => 'camsi', 'CSS0010549' => 'camsi', 'CSS0011364' => 'camsi', 'CSS0014473' => 'camsi', 'CSS0014961' => 'camsi', 'CSS0020191' => 'camsi', 'CSS0021165' => 'camsi', 'CSS0022306' => 'camsi', 'CSS0030591' => 'camsi', 'CSS0030696' => 'camsi', 'CSS0032653' => 'camsi', 'CSS0037487' => 'camsi', 'CSS0041102' => 'camsi', 'CSS0041261' => 'camsi', 'CSS0046246' => 'camsi', 'CSS0049256' => 'camsi', 'DCAR_004075' => 'dca', 'DCAR_011538' => 'dca', 'DCAR_019553' => 'dca', 'DCAR_020952' => 'dca', 'DCAR_021739' => 'dca', 'DCAR_027407' => 'dca', 'DCAR_027913' => 'dca', 'DCAR_028066' => 'dca', 'Dinv05899' => 'din', 'Dinv07563' => 'din', 'Dinv08010' => 'din', 'Dinv14125' => 'din', 'Dinv20172' => 'din', 'Dinv30743' => 'din', 'Dinv31229' => 'din', 'Dinv34162' => 'din', 'Dinv36028' => 'din', 'Dinv39368' => 'din', 'Dinv40565' => 'din', 'Dinv41706' => 'din', 'Duzib052G0089' => 'dzi', 'Duzib116G0641' => 'dzi', 'Duzib132G0069' => 'dzi', 'Duzib132G1219' => 'dzi', 'Duzib147G0278' => 'dzi', 'Duzib160G0480' => 'dzi', 'Duzib170G0661' => 'dzi', 'Duzib177G0591' => 'dzi', 'Duzib187G1353' => 'dzi', 'Duzib192G0858' => 'dzi', 'Duzib192G0883' => 'dzi', 'Duzib213G0506' => 'dzi', 'Duzib235G0289' => 'dzi', 'Duzib251G0422' => 'dzi', 'ECA232G3898' => 'eca', 'ECA233G5950' => 'eca', 'ECA234G1699' => 'eca', 'ECA234G2421' => 'eca', 'ECA236G0426' => 'eca', 'ECA236G4331' => 'eca', 'ECA248G2573' => 'eca', 'EL10Ac1g00077' => 'bvu', 'EL10Ac1g01746' => 'bvu', 'EL10Ac2g03464' => 'bvu', 'EL10Ac4g08176' => 'bvu', 'EL10Ac7g17521' => 'bvu', 'EL10Ac8g20386' => 'bvu', 'EL10Ac9g21343' => 'bvu', 'EL10Ac9g22688' => 'bvu', 'Eucgr.B03434' => 'egr', 'Eucgr.D00618' => 'egr', 'Eucgr.E02395' => 'egr', 'Eucgr.F01129' => 'egr', 'Eucgr.F02622' => 'egr', 'Eucgr.F04207' => 'egr', 'FAN01G0570' => 'fan', 'FAN03G3351' => 'fan', 'FAN06G3702' => 'fan', 'FAN07G2149' => 'fan', 'FAN10G3758' => 'fan', 'FAN11G1170' => 'fan', 'FAN11G2050' => 'fan', 'FAN11G2724' => 'fan', 'FAN12G1700' => 'fan', 'FAN12G2028' => 'fan', 'FAN15G1160' => 'fan', 'FAN15G3063' => 'fan', 'FAN16G2540' => 'fan', 'FAN16G3077' => 'fan', 'FAN16G3624' => 'fan', 'FAN17G0221' => 'fan', 'FAN20G2492' => 'fan', 'FAN20G2905' => 'fan', 'FAN21G0548' => 'fan', 'FAN21G1300' => 'fan', 'FAN22G0077' => 'fan', 'FAN22G1315' => 'fan', 'FAN24G1280' => 'fan', 'FAN24G1445' => 'fan', 'FAN24G3527' => 'fan', 'FAN25G0464' => 'fan', 'FAN25G2885' => 'fan', 'FAN25G3270' => 'fan', 'FAN27G1101' => 'fan', 'FAN27G2846' => 'fan', 'FAN27G3524' => 'fan', 'FvH4_2g11770' => 'fve', 'FvH4_2g15630' => 'fve', 'FvH4_3g05570' => 'fve', 'FvH4_3g09110' => 'fve', 'FvH4_3g19940' => 'fve', 'FvH4_4g04821' => 'fve', 'FvH4_4g31480' => 'fve', 'FvH4_7g01740' => 'fve', 'Glyma.05G130400' => 'gma', 'Glyma.05G156400' => 'gma', 'Glyma.07G197000' => 'gma', 'Glyma.08G085151' => 'gma', 'Glyma.08G114500' => 'gma', 'Glyma.08G300400' => 'gma', 'Glyma.10G215800' => 'gma', 'Glyma.12G224400' => 'gma', 'Glyma.13G179300' => 'gma', 'Glyma.13G218151' => 'gma', 'Glyma.13G238800' => 'gma', 'Glyma.13G276900' => 'gma', 'Glyma.14G078200' => 'gma', 'Glyma.15G074500' => 'gma', 'Glyma.15G094100' => 'gma', 'Glyma.17G247200' => 'gma', 'Glyma.18G120100' => 'gma', 'Glyma.20G176000' => 'gma', 'Gohir.A01G063600' => 'ghi', 'Gohir.A01G170301' => 'ghi', 'Gohir.A02G060500' => 'ghi', 'Gohir.A05G133850' => 'ghi', 'Gohir.A05G161400' => 'ghi', 'Gohir.A06G012900' => 'ghi', 'Gohir.A06G035901' => 'ghi', 'Gohir.A06G127100' => 'ghi', 'Gohir.A06G210500' => 'ghi', 'Gohir.A08G008650' => 'ghi', 'Gohir.A09G072700' => 'ghi', 'Gohir.A09G088301' => 'ghi', 'Gohir.A10G040600' => 'ghi', 'Gohir.A12G036300' => 'ghi', 'Gohir.A12G143350' => 'ghi', 'Gohir.A12G165500' => 'ghi', 'Gohir.A13G145700' => 'ghi', 'Gohir.D01G050000' => 'ghi', 'Gohir.D01G051366' => 'ghi', 'Gohir.D01G161350' => 'ghi', 'Gohir.D02G065900' => 'ghi', 'Gohir.D05G164200' => 'ghi', 'Gohir.D05G355500' => 'ghi', 'Gohir.D06G010400' => 'ghi', 'Gohir.D06G111250' => 'ghi', 'Gohir.D06G132000' => 'ghi', 'Gohir.D06G210500' => 'ghi', 'Gohir.D07G165675' => 'ghi', 'Gohir.D08G062240' => 'ghi', 'Gohir.D08G086101' => 'ghi', 'Gohir.D08G138060' => 'ghi', 'Gohir.D09G072300' => 'ghi', 'Gohir.D10G041400' => 'ghi', 'Gohir.D11G191020' => 'ghi', 'Gohir.D11G212066' => 'ghi', 'Gohir.D12G036300' => 'ghi', 'Gohir.D12G168600' => 'ghi', 'Gohir.D13G150600' => 'ghi', 'Gorai.001G057300' => 'gra', 'Gorai.002G069900' => 'gra', 'Gorai.002G200000' => 'gra', 'Gorai.003G067600' => 'gra', 'Gorai.005G074800' => 'gra', 'Gorai.006G087300' => 'gra', 'Gorai.008G037500' => 'gra', 'Gorai.008G181400' => 'gra', 'Gorai.009G169400' => 'gra', 'Gorai.009G387900' => 'gra', 'Gorai.010G013300' => 'gra', 'Gorai.010G153800' => 'gra', 'Gorai.010G255800' => 'gra', 'Gorai.011G043700' => 'gra', 'Gorai.011G198900' => 'gra', 'Gorai.013G168400' => 'gra', 'GSVIVG01005212001' => 'vvi', 'GSVIVG01006163001' => 'vvi', 'GSVIVG01009625001' => 'vvi', 'GSVIVG01014338001' => 'vvi', 'GSVIVG01020005001' => 'vvi', 'GSVIVG01021450001' => 'vvi', 'GSVIVG01023975001' => 'vvi', 'GSVIVG01034490001' => 'vvi', 'HanXRQChr04g0112071' => 'han', 'HanXRQChr05g0131151' => 'han', 'HanXRQChr09g0262371' => 'han', 'HanXRQChr09g0268401' => 'han', 'HanXRQChr10g0279241' => 'han', 'HanXRQChr10g0297961' => 'han', 'HanXRQChr11g0326231' => 'han', 'HanXRQChr11g0328471' => 'han', 'HanXRQChr16g0507941' => 'han', 'HanXRQChr17g0560211' => 'han', 'Haze_02108' => 'cav', 'Haze_02428' => 'cav', 'Haze_05593' => 'cav', 'Haze_06448' => 'cav', 'Haze_09427' => 'cav', 'Haze_12022' => 'cav', 'Haze_17612' => 'cav', 'Haze_17928' => 'cav', 'Hma1.2p1_0032F.1_g019250' => 'hma', 'Hma1.2p1_0163F.1_g072690' => 'hma', 'Hma1.2p1_0265F.1_g106710' => 'hma', 'Hma1.2p1_0286F.1_g113970' => 'hma', 'Hma1.2p1_0363F.1_g136640' => 'hma', 'Hma1.2p1_0584F.1_g183470' => 'hma', 'Hma1.2p1_0885F.1_g232570' => 'hma', 'HPP92_006022' => 'vpl', 'HPP92_007320' => 'vpl', 'HPP92_011521' => 'vpl', 'HPP92_019387' => 'vpl', 'HPP92_024038' => 'vpl', 'Hund05891' => 'sun', 'Hund06450' => 'sun', 'Hund12053' => 'sun', 'Hund16800' => 'sun', 'Hund21222' => 'sun', 'Hund22896' => 'sun', 'Hund23746' => 'sun', 'Hund27083' => 'sun', 'Lalb_Chr02g0141831' => 'lal', 'Lalb_Chr02g0141841' => 'lal', 'Lalb_Chr05g0220411' => 'lal', 'Lalb_Chr06g0162081' => 'lal', 'Lalb_Chr09g0327651' => 'lal', 'Lalb_Chr13g0295051' => 'lal', 'Lalb_Chr15g0086801' => 'lal', 'Lalb_Chr16g0383781' => 'lal', 'Lalb_Chr16g0383791' => 'lal', 'Lalb_Chr18g0055441' => 'lal', 'Lalb_Chr18g0059611' => 'lal', 'Lalb_Chr20g0109661' => 'lal', 'Lalb_Chr20g0109831' => 'lal', 'Lalb_Chr20g0121871' => 'lal', 'Lalb_Chr22g0355361' => 'lal', 'Lalb_Chr25g0286371' => 'lal', 'Lj1A1187G43' => 'lonja', 'Lj1A1205T50' => 'lonja', 'Lj1A800G33' => 'lonja', 'Lj1C1187T7' => 'lonja', 'Lj1C843T11' => 'lonja', 'Lj1g0010940' => 'lja', 'Lj2A288T69' => 'lonja', 'Lj3g0024276' => 'lja', 'Lj4A47T76' => 'lonja', 'Lj4g0005805' => 'lja', 'Lj4g0006097' => 'lja', 'Lj4g0008528' => 'lja', 'Lj4g0024907' => 'lja', 'Lj5g0012472' => 'lja', 'Lj5g0018648' => 'lja', 'Lj6C789G1' => 'lonja', 'Lj6g0004000' => 'lja', 'Lj7A292G67' => 'lonja', 'Lj7A292T64' => 'lonja', 'Lj9A400T58' => 'lonja', 'Lsat_1_v5_gn_1_126181' => 'lsa', 'Lsat_1_v5_gn_4_123041' => 'lsa', 'Lsat_1_v5_gn_4_133620' => 'lsa', 'Lsat_1_v5_gn_4_53221' => 'lsa', 'Lsat_1_v5_gn_4_71961' => 'lsa', 'Lsat_1_v5_gn_7_105241' => 'lsa', 'Lsat_1_v5_gn_7_21361' => 'lsa', 'Lsat_1_v5_gn_7_28860' => 'lsa', 'Lsat_1_v5_gn_7_31260' => 'lsa', 'Lsat_1_v5_gn_8_52801' => 'lsa', 'Manes.02G191400' => 'mes', 'Manes.03G110100' => 'mes', 'Manes.04G071100' => 'mes', 'Manes.05G100500' => 'mes', 'Manes.05G164700' => 'mes', 'Manes.15G087000' => 'mes', 'Manes.15G121500' => 'mes', 'Manes.16G028300' => 'mes', 'Manes.17G046100' => 'mes', 'Manes.17G069800' => 'mes', 'Manes.18G100500' => 'mes', 'Mapoly0002s0109' => 'mpo', 'Mapoly0024s0007' => 'mpo', 'Mapoly0089s0032' => 'mpo', 'MBI04_g42241_MAGBIO' => 'mbi', 'MBI05_g11988_MAGBIO' => 'mbi', 'MBI05_g35452_MAGBIO' => 'mbi', 'MBI07_g30179_MAGBIO' => 'mbi', 'MBI07_g35859_MAGBIO' => 'mbi', 'MBI07_g35860_MAGBIO' => 'mbi', 'MBI07_g37166_MAGBIO' => 'mbi', 'MBI08_g18172_MAGBIO' => 'mbi', 'MBI09_g08441_MAGBIO' => 'mbi', 'MBI13_g01676_MAGBIO' => 'mbi', 'MBI14_g42955_MAGBIO' => 'mbi', 'MBI16_g13161_MAGBIO' => 'mbi', 'MBI17_g27204_MAGBIO' => 'mbi', 'MBI19_g21595_MAGBIO' => 'mbi', 'MD00G1148400' => 'mdo', 'MD02G1301200' => 'mdo', 'MD03G1227800' => 'mdo', 'MD05G1041100' => 'mdo', 'MD05G1124800' => 'mdo', 'MD05G1284000' => 'mdo', 'MD05G1338800' => 'mdo', 'MD05G1338900' => 'mdo', 'MD07G1022800' => 'mdo', 'MD10G1047500' => 'mdo', 'MD10G1127500' => 'mdo', 'MD10G1262300' => 'mdo', 'MD10G1293800' => 'mdo', 'MD16G1074300' => 'mdo', 'Medtr1g021670' => 'mtr', 'Medtr1g096320' => 'mtr', 'Medtr2g013690' => 'mtr', 'Medtr2g019450' => 'mtr', 'Medtr2g085170' => 'mtr', 'Medtr4g088785' => 'mtr', 'Medtr8g055930' => 'mtr', 'Medtr8g085850' => 'mtr', 'MELO3C002605.2' => 'cme', 'MELO3C003891.2' => 'cme', 'MELO3C004012.2' => 'cme', 'MELO3C007134.2' => 'cme', 'MELO3C008118.2' => 'cme', 'MELO3C016700.2' => 'cme', 'MELO3C024127.2' => 'cme', 'MELO3C033361.2' => 'cme', 'MELO3C033362.2' => 'cme', 'Migut.C00430' => 'egut', 'Migut.C01246' => 'egut', 'Migut.E00101' => 'egut', 'Migut.H01486' => 'egut', 'Migut.H01939' => 'egut', 'Migut.K00360' => 'egut', 'Migut.M00910' => 'egut', 'Migut.M01139' => 'egut', 'Migut.N02677' => 'egut', 'MSTRG.13252' => 'ama', 'MSTRG.14701' => 'ama', 'MSTRG.1521' => 'ama', 'MSTRG.15884' => 'ama', 'MSTRG.16242' => 'ama', 'MSTRG.22285' => 'ama', 'MSTRG.22444' => 'ama', 'MSTRG.2349' => 'ama', 'MSTRG.26308' => 'ama', 'MSTRG.28296' => 'ama', 'MSTRG.9895' => 'ama', 'Nitab4.5_0000110g0060' => 'nta', 'Nitab4.5_0000420g0130' => 'nta', 'Nitab4.5_0000422g0030' => 'nta', 'Nitab4.5_0000560g0180' => 'nta', 'Nitab4.5_0000703g0100' => 'nta', 'Nitab4.5_0000786g0200' => 'nta', 'Nitab4.5_0001336g0020' => 'nta', 'Nitab4.5_0001796g0030' => 'nta', 'Nitab4.5_0003348g0060' => 'nta', 'Nitab4.5_0003698g0040' => 'nta', 'Nitab4.5_0003942g0090' => 'nta', 'Nitab4.5_0004775g0070' => 'nta', 'Nitab4.5_0004864g0030' => 'nta', 'Nitab4.5_0005615g0020' => 'nta', 'Nitab4.5_0009288g0030' => 'nta', 'Nitab4.5_0009341g0010' => 'nta', 'Nitab4.5_0009535g0010' => 'nta', 'Nn1g03995' => 'nnu', 'Nn1g04100' => 'nnu', 'Nn1g06530' => 'nnu', 'Nn3g16404' => 'nnu', 'Nn3g17212' => 'nnu', 'Nn3g20776' => 'nnu', 'Nn3g21923' => 'nnu', 'Nn5g27737' => 'nnu', 'Nn5g29461' => 'nnu', 'Nn7g38355' => 'nnu', 'Nn8g39873' => 'nnu', 'Oeu000548.2' => 'oeu', 'Oeu004672.1' => 'oeu', 'Oeu015605.2' => 'oeu', 'Oeu016092.1' => 'oeu', 'Oeu017879.3' => 'oeu', 'Oeu024910.1' => 'oeu', 'Oeu028965.1' => 'oeu', 'Oeu031269.1' => 'oeu', 'Oeu031270.1' => 'oeu', 'Oeu032535.1' => 'oeu', 'Oeu034151.1' => 'oeu', 'Oeu034152.1' => 'oeu', 'Oeu034588.2' => 'oeu', 'Oeu050846.1' => 'oeu', 'Oeu050849.2' => 'oeu', 'Oeu051063.2' => 'oeu', 'Oeu052368.1' => 'oeu', 'Oeu052370.1' => 'oeu', 'Os01g0210400' => 'osa', 'Os01g0304300' => 'osa', 'Os01g0749100' => 'osa', 'Os02g0745800' => 'osa', 'Os03g0769050' => 'osa', 'Os05g0531500' => 'osa', 'Os06g0724300' => 'osa', 'Os11g0198100' => 'osa', 'Peaxi162Scf00069g01425' => 'pax', 'Peaxi162Scf00280g00811' => 'pax', 'Peaxi162Scf00310g00615' => 'pax', 'Peaxi162Scf00362g00542' => 'pax', 'Peaxi162Scf00461g00310' => 'pax', 'Peaxi162Scf00530g00118' => 'pax', 'Peaxi162Scf00541g00057' => 'pax', 'Peaxi162Scf00661g00017' => 'pax', 'Peaxi162Scf00926g00027' => 'pax', 'Peaxi162Scf01064g00263' => 'pax', 'Peaxi162Scf01211g00135' => 'pax', 'PGR004G2336' => 'pgr', 'PGR042G0327' => 'pgr', 'PGR042G1957' => 'pgr', 'PGR042G2003' => 'pgr', 'PGR042G3929' => 'pgr', 'PGR083G1137' => 'pgr', 'PGR083G1364' => 'pgr', 'PGSC0003DMG400003381' => 'stu', 'PGSC0003DMG400003417' => 'stu', 'PGSC0003DMG400008981' => 'stu', 'PGSC0003DMG400012417' => 'stu', 'PGSC0003DMG400012823' => 'stu', 'PGSC0003DMG400016885' => 'stu', 'PGSC0003DMG400022812' => 'stu', 'PGSC0003DMG400029726' => 'stu', 'PGSC0003DMG401009243' => 'stu', 'PGSC0003DMG401031505' => 'stu', 'PGSC0003DMG402031505' => 'stu', 'Phvul.001G017600' => 'pvu', 'Phvul.002G193500' => 'pvu', 'Phvul.002G228900' => 'pvu', 'Phvul.002G236800' => 'pvu', 'Phvul.003G049500' => 'pvu', 'Phvul.005G072000' => 'pvu', 'Phvul.006G164800' => 'pvu', 'Phvul.006G185100' => 'pvu', 'Phvul.007G090000' => 'pvu', 'Potri.001G399800' => 'ptr', 'Potri.002G149900' => 'ptr', 'Potri.004G044100' => 'ptr', 'Potri.004G177600' => 'ptr', 'Potri.009G138000' => 'ptr', 'Potri.010G094000' => 'ptr', 'Potri.011G053000' => 'ptr', 'Potri.011G119300' => 'ptr', 'Potri.013G113700' => 'ptr', 'Potri.018G107800' => 'ptr', 'Potri.019G084100' => 'ptr', 'Pp3c14_23720' => 'ppa', 'Pp3c16_6340' => 'ppa', 'Pp3c23_13420' => 'ppa', 'Pp3c24_2740' => 'ppa', 'Pp3c25_860' => 'ppa', 'Pp3c8_21750' => 'ppa', 'Prupe.1G273000' => 'ppe', 'Prupe.1G273700' => 'ppe', 'Prupe.1G274100' => 'ppe', 'Prupe.2G023300' => 'ppe', 'Prupe.4G048000' => 'ppe', 'Prupe.4G080400' => 'ppe', 'Prupe.4G181200' => 'ppe', 'Prupe.8G056900' => 'ppe', 'Prupe.8G168700' => 'ppe', 'Psat1g189080' => 'psa', 'Psat1g204760' => 'psa', 'Psat4g175560' => 'psa', 'Psat4g177720' => 'psa', 'Psat5g244240' => 'psa', 'Psat6g010720' => 'psa', 'Psat6g187200' => 'psa', 'Psat7g072040' => 'psa', 'PSO017G3501' => 'pso', 'PSO063G2148' => 'pso', 'PSO063G5608' => 'pso', 'PSO210G6392' => 'pso', 'PSO541G2319' => 'pso', 'PSO541G2836' => 'pso', 'PSO541G4012' => 'pso', 'PSO541G6253' => 'pso', 'PSO675G0580' => 'pso', 'PSO675G0856' => 'pso', 'PSO675G5635' => 'pso', 'PSO675G9157' => 'pso', 'PSO832G1660' => 'pso', 'PSO832G1969' => 'pso', 'QL02p007186' => 'qlo', 'QL02p033904' => 'qlo', 'QL03p064391' => 'qlo', 'QL05p040593' => 'qlo', 'QL05p058242' => 'qlo', 'QL08p021825' => 'qlo', 'QL11p004981' => 'qlo', 'RcHm_v2.0_Chr1g0318301' => 'rch', 'RcHm_v2.0_Chr4g0418501' => 'rch', 'RcHm_v2.0_Chr4g0439971' => 'rch', 'RcHm_v2.0_Chr5g0008541' => 'rch', 'RcHm_v2.0_Chr5g0014101' => 'rch', 'RcHm_v2.0_Chr5g0014131' => 'rch', 'RcHm_v2.0_Chr5g0033621' => 'rch', 'RcHm_v2.0_Chr6g0272041' => 'rch', 'RcHm_v2.0_Chr6g0278831' => 'rch', 'Rhsim02G0130400' => 'rsi', 'Rhsim02G0171100' => 'rsi', 'Rhsim05G0053000' => 'rsi', 'Rhsim05G0053100' => 'rsi', 'Rhsim06G0096500' => 'rsi', 'Rhsim06G0096600' => 'rsi', 'Rhsim06G0199100' => 'rsi', 'Rhsim12G0062300' => 'rsi', 'Rhsim12G0062800' => 'rsi', 'Sabra02G0118600' => 'sbr', 'Sabra04G0027300' => 'sbr', 'Sabra04G0119500' => 'sbr', 'Sabra08G0112500' => 'sbr', 'Sabra11G0036800' => 'sbr', 'Sabra11G0103800' => 'sbr', 'Sabra13G0096300' => 'sbr', 'Sabra16G0262300' => 'sbr', 'Sabra18G0091700' => 'sbr', 'Sabra19G0095400' => 'sbr', 'SalBow6G3080' => 'sbo', 'SalBow7G1157' => 'sbo', 'SalBow7G2123' => 'sbo', 'SalBow7G2285' => 'sbo', 'SalBow7G3537' => 'sbo', 'SalBow8G2947' => 'sbo', 'SalBow8G4463' => 'sbo', 'SalBow8G5466' => 'sbo', 'Sc01g0001750' => 'sci', 'Sc02g0006640' => 'sci', 'Sc02g0006670' => 'sci', 'Sc04g0008220' => 'sci', 'Sc05g0006190' => 'sci', 'Sc08g0002760' => 'sci', 'Sc17g0006170' => 'sci', 'Sc22g0002050' => 'sci', 'Sc23g0001190' => 'sci', 'Sc24g0000980' => 'sci', 'Sed0006245' => 'sed', 'Sed0007543' => 'sed', 'Sed0009411' => 'sed', 'Sed0010765' => 'sed', 'Sed0012944' => 'sed', 'Sed0014682' => 'sed', 'Sed0016174' => 'sed', 'Sed0016796' => 'sed', 'Sed0020317' => 'sed', 'Sed0021467' => 'sed', 'SEGI_01316' => 'sgi', 'SEGI_03374' => 'sgi', 'SEGI_16265' => 'sgi', 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'Solyc03g079860.2' => 'sly', 'Solyc04g079770.3' => 'sly', 'Solyc05g007430.4' => 'sly', 'Solyc07g063150.3' => 'sly', 'Solyc08g016620.3' => 'sly', 'Solyc09g057590.3' => 'sly', 'Solyc09g057600.1' => 'sly', 'Solyc10g009050.3' => 'sly', 'Solyc11g017420.2' => 'sly', 'Sopen01g053810' => 'spe', 'Sopen02g023040' => 'spe', 'Sopen03g002440' => 'spe', 'Sopen04g033350' => 'spe', 'Sopen05g003310' => 'spe', 'Sopen07g004050' => 'spe', 'Sopen07g031340' => 'spe', 'Sopen08g006990' => 'spe', 'Sopen10g004830' => 'spe', 'Sopen11g009370' => 'spe', 'Sp1g24450' => 'spa', 'Sp1g29670' => 'spa', 'Sp1g39600' => 'spa', 'Sp2g11080' => 'spa', 'Sp2g13970' => 'spa', 'Sp4g16130' => 'spa', 'Sp6g13080' => 'spa', 'Sp7g37270' => 'spa', 'TAR371G0065' => 'tar', 'TAR376G0340' => 'tar', 'TAR376G0435' => 'tar', 'TAR381G0002' => 'tar', 'TAR381G1236' => 'tar', 'TAR624G0055' => 'tar', 'TAR624G0324' => 'tar', 'TAR624G0696' => 'tar', 'TAR624G0906' => 'tar', 'TAR625G0107' => 'tar', 'TAR626G0015' => 'tar', 'TAR626G1356' => 'tar', 'TAR627G0888' => 'tar', 'TAR628G0399' => 'tar', 'TAR628G1327' => 'tar', 'TAR629G2831' => 'tar', 'TAR629G2874' => 'tar', 'TAR633G1432' => 'tar', 'TAR633G2771' => 'tar', 'THA.LOC104803394' => 'tha', 'THA.LOC104805153' => 'tha', 'THA.LOC104806784' => 'tha', 'THA.LOC104810473' => 'tha', 'THA.LOC104813100' => 'tha', 'THA.LOC104814215' => 'tha', 'THA.LOC104815554' => 'tha', 'THA.LOC104820544' => 'tha', 'THA.LOC104824754' => 'tha', 'THA.LOC104827717' => 'tha', 'Thecc.02G031400' => 'tca', 'Thecc.02G055900' => 'tca', 'Thecc.02G350800' => 'tca', 'Thecc.06G150900' => 'tca', 'Thecc.06G186600' => 'tca', 'Thecc.07G089600' => 'tca', 'Thecc.08G020400' => 'tca', 'Thecc.08G182100' => 'tca', 'Thhalv10000873m.g' => 'esa', 'Thhalv10004185m.g' => 'esa', 'Thhalv10006981m.g' => 'esa', 'Thhalv10007204m.g' => 'esa', 'Thhalv10011374m.g' => 'esa', 'Thhalv10013482m.g' => 'esa', 'Thhalv10017801m.g' => 'esa', 'Thhalv10024983m.g' => 'esa', 'TPR.G12072' => 'tpr', 'TPR.G15769' => 'tpr', 'TPR.G16504' => 'tpr', 'TPR.G16506' => 'tpr', 'TPR.G24345' => 'tpr', 'TPR.G26666' => 'tpr', 'TPR.G27320' => 'tpr', 'TPR.G31819' => 'tpr', 'TPR.G38879' => 'tpr', 'TPR.G39015' => 'tpr', 'TPR.G8819' => 'tpr', 'TWI09G0924' => 'twi', 'TWI12G0811' => 'twi', 'TWI12G1294' => 'twi', 'TWI31G0150' => 'twi', 'TWI36G1262' => 'twi', 'TWI38G1287' => 'twi', 'TWI38G1633' => 'twi', 'TWI38G1982' => 'twi', 'TWI39G0116' => 'twi', 'TWI60G1011' => 'twi', 'TWI63G0171' => 'twi', 'TWI73G0839' => 'twi', 'TWI79G1511' => 'twi', 'unitig_0.g915' => 'ugi', 'unitig_0.g916' => 'ugi', 'unitig_21.g20219' => 'ugi', 'unitig_21.g20416' => 'ugi', 'unitig_578.g16132' => 'ugi', 'unitig_578.g16718' => 'ugi', 'unitig_62.g23481' => 'ugi', 'unitig_744.g24535' => 'ugi', 'unitig_749.g13525' => 'ugi', 'vmacro01248' => 'vma', 'vmacro02290' => 'vma', 'vmacro10946' => 'vma', 'vmacro11865' => 'vma', 'vmacro12493' => 'vma', 'vmacro17322' => 'vma', 'vmacro21599' => 'vma', 'vmacro23041' => 'vma', 'VMungo0251G0004' => 'vmu', 'VMungo0251G2639' => 'vmu', 'VMungo0251G2967' => 'vmu', 'VMungo0540G0864' => 'vmu', 'VMungo0540G1569' => 'vmu', 'VMungo0647G0317' => 'vmu', 'VMungo0720G1373' => 'vmu', 'VMungo0720G1508' => 'vmu', 'VMungo1080G0485' => 'vmu', 'VMungo1215G3177' => 'vmu', 'Zm00001eb112600' => 'zma', 'Zm00001eb120220' => 'zma', 'Zm00001eb153240' => 'zma', 'Zm00001eb168880' => 'zma', 'Zm00001eb213920' => 'zma', 'Zm00001eb228280' => 'zma', 'Zm00001eb254580' => 'zma', 'Zm00001eb272180' => 'zma', 'Zm00001eb293190' => 'zma', 'Zm00001eb322930' => 'zma', 'Zm00001eb353360' => 'zma', 'Zm00001eb353390' => 'zma', 'Zm00001eb353430' => 'zma', 'Zm00001eb353440' => 'zma', 'Zm00001eb353780' => 'zma' ), 'gf_id' => 'HOM05D000499', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000499' ), 'data_identifier' => 'HOM05D000499', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000499', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1066', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p29780' => 'bna', 'A02p33180' => 'bna', 'A03p16470' => 'bna', 'A03p66010' => 'bna', 'A04p25970' => 'bna', 'A06p01270' => 'bna', 'A06p46080' => 'bna', 'A07p11400' => 'bna', 'A08p01840' => 'bna', 'A08p08230' => 'bna', 'A08p25740' => 'bna', 'A09p32070' => 'bna', 'A09p37830' => 'bna', 'A09p42840' => 'bna', 'A09p42850' => 'bna', 'Aa31LG10G2060' => 'aar', 'Aa31LG2G7410' => 'aar', 'Aa31LG6G10200' => 'aar', 'Aa31LG6G16680' => 'aar', 'Aa31LG6G8470' => 'aar', 'Aa31LG9G12730' => 'aar', 'Aa31LG9G13680' => 'aar', 'Aa31LG9G14920' => 'aar', 'Aa31LG9G6650' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4977' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5467' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3254' => 'aag', 'Actinidia02578' => 'ach', 'Actinidia07693' => 'ach', 'Actinidia08413' => 'ach', 'Actinidia08414' => 'ach', 'Actinidia15289' => 'ach', 'Actinidia19871' => 'ach', 'Actinidia21475' => 'ach', 'Actinidia22576' => 'ach', 'Actinidia28327' => 'ach', 'Actinidia32491' => 'ach', 'Actinidia39463' => 'ach', 'Actinidia39571' => 'ach', 'Ah.01g013750' => 'amhyb', 'Ah.01g023210' => 'amhyb', 'Ah.04g164850' => 'amhyb', 'Ah.05g178060' => 'amhyb', 'Ah.07g204270' => 'amhyb', 'Ah.07g208480' => 'amhyb', 'Ah.09g237410' => 'amhyb', 'Ah.14g089460' => 'amhyb', 'AL1G41790' => 'aly', 'AL1G49050' => 'aly', 'AL1G53810' => 'aly', 'AL1G61400' => 'aly', 'AL4G18580' => 'aly', 'AL5G12510' => 'aly', 'AL5G12540' => 'aly', 'AL6G43230' => 'aly', 'AL7G10370' => 'aly', 'AL7G19250' => 'aly', 'AL8G12240' => 'aly', 'AL8G18540' => 'aly', 'Aqoxy1G02409' => 'aox', 'Aqoxy2G03993' => 'aox', 'Aqoxy3G03357' => 'aox', 'Aqoxy4G00785' => 'aox', 'Aqoxy5G02598' => 'aox', 'Aqoxy6G00132' => 'aox', 'Aqoxy7G01776' => 'aox', 'Aqoxy7G02316' => 'aox', 'Aqoxy7G03973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.12AFKW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B8730' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27IQR1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3F75VG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3RE0GA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41TCQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.527VTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FIR39' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5W8UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DA38EV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ63HS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H1I32C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HC27T5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4M8AP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7N3CZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9UVDZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LS1NQA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT1D4B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SKC4TM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCFV76' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF9Q1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQWD9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1ZM88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WE07RT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YCK7VH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJE6Q6' => 'arhy', 'AT1G28240' => 'ath', 'AT1G34550' => 'ath', 'AT1G53040' => 'ath', 'AT2G02910' => 'ath', 'AT4G09630' => 'ath', 'AT4G38500' => 'ath', 'AT5G42660' => 'ath', 'AT5G46220' => 'ath', 'ATR0152G026' => 'atr', 'ATR0564G343' => 'atr', 'ATR0706G151' => 'atr', 'ATR0733G207' => 'atr', 'ATR0751G234' => 'atr', 'ATR0807G048' => 'atr', 'ATR1091G084' => 'atr', 'Atru.chr10.1229' => 'acertr', 'Atru.chr10.1230' => 'acertr', 'Atru.chr10.1874' => 'acertr', 'Atru.chr11.1808' => 'acertr', 'Atru.chr13.1795' => 'acertr', 'Atru.chr13.570' => 'acertr', 'Atru.chr2.2608' => 'acertr', 'Atru.chr2.2609' => 'acertr', 'Atru.chr5.3428' => 'acertr', 'Atru.chr8.1171' => 'acertr', 'AUR62004651' => 'cqu', 'AUR62008675' => 'cqu', 'AUR62010014' => 'cqu', 'AUR62013004' => 'cqu', 'AUR62014825' => 'cqu', 'AUR62015015' => 'cqu', 'AUR62015151' => 'cqu', 'AUR62017020' => 'cqu', 'AUR62019422' => 'cqu', 'AUR62023570' => 'cqu', 'AUR62025571' => 'cqu', 'AUR62029098' => 'cqu', 'AUR62033863' => 'cqu', 'AUR62034296' => 'cqu', 'AUR62040075' => 'cqu', 'BcaB02g07334' => 'bca', 'BcaB02g10575' => 'bca', 'BcaB03g12119' => 'bca', 'BcaB03g12120' => 'bca', 'BcaB03g13945' => 'bca', 'BcaB04g17123' => 'bca', 'BcaB04g17867' => 'bca', 'BcaB04g19839' => 'bca', 'BcaB07g30317' => 'bca', 'BcaB07g32432' => 'bca', 'BcaB07g33362' => 'bca', 'BcaB08g36611' => 'bca', 'BcaC01g00028' => 'bca', 'BcaC01g01356' => 'bca', 'BcaC01g02034' => 'bca', 'BcaC01g06051' => 'bca', 'BcaC03g16839' => 'bca', 'BcaC03g17176' => 'bca', 'BcaC05g26829' => 'bca', 'BcaC06g31490' => 'bca', 'BcaC06g35344' => 'bca', 'BcaC06g36570' => 'bca', 'BcaC07g37537' => 'bca', 'BcaC08g43491' => 'bca', 'BcaC08g43773' => 'bca', 'BcaNung00234' => 'bca', 'BcaNung01982' => 'bca', 'BcaNung03707' => 'bca', 'BcaNung06454' => 'bca', 'BolC2t10762H' => 'bol', 'BolC2t11191H' => 'bol', 'BolC3t14322H' => 'bol', 'BolC3t19747H' => 'bol', 'BolC3t21425H' => 'bol', 'BolC4t27800H' => 'bol', 'BolC5t31423H' => 'bol', 'BolC6t35951H' => 'bol', 'BolC6t36282H' => 'bol', 'BolC7t40678H' => 'bol', 'BolC7t40679H' => 'bol', 'BolC7t42222H' => 'bol', 'BolC7t43492H' => 'bol', 'BolC7t46785H' => 'bol', 'BolC8t47853H' => 'bol', 'BolC9t56805H' => 'bol', 'BraA02t08000Z' => 'bra', 'BraA02t08341Z' => 'bra', 'BraA03t10936Z' => 'bra', 'BraA03t15657Z' => 'bra', 'BraA04t18100Z' => 'bra', 'BraA05t20523Z' => 'bra', 'BraA06t23353Z' => 'bra', 'BraA06t27473Z' => 'bra', 'BraA06t27769Z' => 'bra', 'BraA07t28928Z' => 'bra', 'BraA08t32236Z' => 'bra', 'BraA08t32841Z' => 'bra', 'BraA08t34524Z' => 'bra', 'BraA09t38742Z' => 'bra', 'BraA09t39295Z' => 'bra', 'C02p47180' => 'bna', 'C02p50990' => 'bna', 'C03p19360' => 'bna', 'C03p74950' => 'bna', 'C03p91000' => 'bna', 'C04p63260' => 'bna', 'C05p27050' => 'bna', 'C06p08750' => 'bna', 'C06p11490' => 'bna', 'C07p02820' => 'bna', 'C07p17180' => 'bna', 'C07p29440' => 'bna', 'C07p63730' => 'bna', 'C09p39260' => 'bna', 'CAN.G1164.34' => 'can', 'CAN.G1164.39' => 'can', 'CAN.G1530.3' => 'can', 'CAN.G162.61' => 'can', 'CAN.G176.6' => 'can', 'CAN.G289.49' => 'can', 'CAN.G370.21' => 'can', 'CAN.G370.22' => 'can', 'CAN.G371.117' => 'can', 'CAN.G58.37' => 'can', 'CAN.G588.98' => 'can', 'CANSAT21G2266' => 'cansat', 'CANSAT25G2799' => 'cansat', 'CANSAT35G0862' => 'cansat', 'CANSAT35G1704' => 'cansat', 'CANSAT35G1760' => 'cansat', 'CANSAT56G3971' => 'cansat', 'CANSAT56G4116' => 'cansat', 'CANSAT80G1259' => 'cansat', 'CARHR027730' => 'chi', 'CARHR033880' => 'chi', 'CARHR043270' => 'chi', 'CARHR145330' => 'chi', 'CARHR145340' => 'chi', 'CARHR175570' => 'chi', 'CARHR181570' => 'chi', 'CARHR258470' => 'chi', 'CARHR260490' => 'chi', 'CARHR294220' => 'chi', 'Carub.0001s2668' => 'cru', 'Carub.0001s3257' => 'cru', 'Carub.0001s4220' => 'cru', 'Carub.0005s0179' => 'cru', 'Carub.0006s2807' => 'cru', 'Carub.0007s0039' => 'cru', 'Carub.0008s0169' => 'cru', 'Carub.0008s0636' => 'cru', 'Ca_00338_v3' => 'car', 'Ca_00542_v3' => 'car', 'Ca_01844_v3' => 'car', 'Ca_10611_v3' => 'car', 'Ca_13326_v3' => 'car', 'Ca_17944_v3' => 'car', 'Ca_18546_v3' => 'car', 'Ca_24219_v3' => 'car', 'Ca_29972_v3' => 'car', 'CBR_g3681' => 'cbr', 'CBR_g40021' => 'cbr', 'Cc01_g08140' => 'ccan', 'Cc02_g13410' => 'ccan', 'Cc02_g37480' => 'ccan', 'Cc05_g12030' => 'ccan', 'Cc09_g03370' => 'ccan', 'Cc09_g10300' => 'ccan', 'Cc10_g03530' => 'ccan', 'Cc10_g11380' => 'ccan', 'CDE01G0176' => 'cde', 'CDE02G0675' => 'cde', 'CDE02G0942' => 'cde', 'CDE02G1153' => 'cde', 'CDE02G4177' => 'cde', 'CDE04G2117' => 'cde', 'CDE04G2736' => 'cde', 'CDE08G1161' => 'cde', 'CDE09G1238' => 'cde', 'Cfa000467' => 'cfa', 'Cfa000947' => 'cfa', 'Cfa004969' => 'cfa', 'Cfa005284' => 'cfa', 'Cfa008993' => 'cfa', 'Cfa018187' => 'cfa', 'Cfa018454' => 'cfa', 'Cfa020585' => 'cfa', 'Ciclev10000424m.g' => 'ccl', 'Ciclev10003605m.g' => 'ccl', 'Ciclev10007828m.g' => 'ccl', 'Ciclev10014620m.g' => 'ccl', 'Ciclev10015169m.g' => 'ccl', 'Ciclev10018291m.g' => 'ccl', 'Ciclev10028256m.g' => 'ccl', 'Ciclev10033822m.g' => 'ccl', 'CiPaw.05G060300' => 'cil', 'CiPaw.05G085000' => 'cil', 'CiPaw.06G083700' => 'cil', 'CiPaw.06G120300' => 'cil', 'CiPaw.09G060500' => 'cil', 'CiPaw.09G123800' => 'cil', 'CiPaw.11G169700' => 'cil', 'CiPaw.12G118300' => 'cil', 'CiPaw.15G071000' => 'cil', 'CiPaw.15G081900' => 'cil', 'ClCG01G024610' => 'cla', 'ClCG03G006070' => 'cla', 'ClCG05G019250' => 'cla', 'ClCG09G009500' => 'cla', 'ClCG11G008200' => 'cla', 'ClCG11G018080' => 'cla', 'COL.COLO4_17373' => 'col', 'COL.COLO4_22994' => 'col', 'COL.COLO4_26389' => 'col', 'COL.COLO4_27170' => 'col', 'COL.COLO4_31074' => 'col', 'COL.COLO4_31465' => 'col', 'COL.COLO4_36438' => 'col', 'COL.COLO4_36439' => 'col', 'Cpa.g.c38781' => 'cpa', 'Cpa.g.sc128.12' => 'cpa', 'Cpa.g.sc166.7' => 'cpa', 'Cpa.g.sc166.8' => 'cpa', 'Cpa.g.sc20.111' => 'cpa', 'Cpa.g.sc27.31' => 'cpa', 'Cpa.g.sc64.36' => 'cpa', 'Cpa.g.sc64.37' => 'cpa', 'Cpa.g.sc66.49' => 'cpa', 'Cpa.g.sc80.64' => 'cpa', 'CsaV3_1G012320' => 'csa', 'CsaV3_2G008480' => 'csa', 'CsaV3_2G033450' => 'csa', 'CsaV3_3G044830' => 'csa', 'CsaV3_4G033710' => 'csa', 'CsaV3_6G051730' => 'csa', 'CsaV3_7G025350' => 'csa', 'CSS0001067' => 'camsi', 'CSS0005996' => 'camsi', 'CSS0006590' => 'camsi', 'CSS0009673' => 'camsi', 'CSS0010201' => 'camsi', 'CSS0010549' => 'camsi', 'CSS0011364' => 'camsi', 'CSS0014473' => 'camsi', 'CSS0014961' => 'camsi', 'CSS0020191' => 'camsi', 'CSS0021165' => 'camsi', 'CSS0022306' => 'camsi', 'CSS0030591' => 'camsi', 'CSS0030696' => 'camsi', 'CSS0032653' => 'camsi', 'CSS0037487' => 'camsi', 'CSS0041102' => 'camsi', 'CSS0041261' => 'camsi', 'CSS0046246' => 'camsi', 'CSS0049256' => 'camsi', 'DCAR_004075' => 'dca', 'DCAR_011538' => 'dca', 'DCAR_019553' => 'dca', 'DCAR_020952' => 'dca', 'DCAR_021739' => 'dca', 'DCAR_027407' => 'dca', 'DCAR_027913' => 'dca', 'DCAR_028066' => 'dca', 'Dinv05899' => 'din', 'Dinv07563' => 'din', 'Dinv08010' => 'din', 'Dinv14125' => 'din', 'Dinv20172' => 'din', 'Dinv30743' => 'din', 'Dinv31229' => 'din', 'Dinv34162' => 'din', 'Dinv36028' => 'din', 'Dinv39368' => 'din', 'Dinv40565' => 'din', 'Dinv41706' => 'din', 'Duzib052G0089' => 'dzi', 'Duzib116G0641' => 'dzi', 'Duzib132G0069' => 'dzi', 'Duzib132G1219' => 'dzi', 'Duzib147G0278' => 'dzi', 'Duzib160G0480' => 'dzi', 'Duzib170G0661' => 'dzi', 'Duzib177G0591' => 'dzi', 'Duzib187G1353' => 'dzi', 'Duzib192G0858' => 'dzi', 'Duzib192G0883' => 'dzi', 'Duzib213G0506' => 'dzi', 'Duzib235G0289' => 'dzi', 'Duzib251G0422' => 'dzi', 'ECA232G3898' => 'eca', 'ECA233G5950' => 'eca', 'ECA234G1699' => 'eca', 'ECA234G2421' => 'eca', 'ECA236G0426' => 'eca', 'ECA236G4331' => 'eca', 'ECA248G2573' => 'eca', 'EL10Ac1g00077' => 'bvu', 'EL10Ac1g01746' => 'bvu', 'EL10Ac2g03464' => 'bvu', 'EL10Ac4g08176' => 'bvu', 'EL10Ac7g17521' => 'bvu', 'EL10Ac8g20386' => 'bvu', 'EL10Ac9g21343' => 'bvu', 'EL10Ac9g22688' => 'bvu', 'Eucgr.B03434' => 'egr', 'Eucgr.D00618' => 'egr', 'Eucgr.E02395' => 'egr', 'Eucgr.F01129' => 'egr', 'Eucgr.F02622' => 'egr', 'Eucgr.F04207' => 'egr', 'FAN01G0570' => 'fan', 'FAN03G3351' => 'fan', 'FAN06G3702' => 'fan', 'FAN07G2149' => 'fan', 'FAN10G3758' => 'fan', 'FAN11G1170' => 'fan', 'FAN11G2050' => 'fan', 'FAN11G2724' => 'fan', 'FAN12G1700' => 'fan', 'FAN12G2028' => 'fan', 'FAN15G1160' => 'fan', 'FAN15G3063' => 'fan', 'FAN16G2540' => 'fan', 'FAN16G3077' => 'fan', 'FAN16G3624' => 'fan', 'FAN17G0221' => 'fan', 'FAN20G2492' => 'fan', 'FAN20G2905' => 'fan', 'FAN21G0548' => 'fan', 'FAN21G1300' => 'fan', 'FAN22G0077' => 'fan', 'FAN22G1315' => 'fan', 'FAN24G1280' => 'fan', 'FAN24G1445' => 'fan', 'FAN24G3527' => 'fan', 'FAN25G0464' => 'fan', 'FAN25G2885' => 'fan', 'FAN25G3270' => 'fan', 'FAN27G1101' => 'fan', 'FAN27G2846' => 'fan', 'FAN27G3524' => 'fan', 'FvH4_2g11770' => 'fve', 'FvH4_2g15630' => 'fve', 'FvH4_3g05570' => 'fve', 'FvH4_3g09110' => 'fve', 'FvH4_3g19940' => 'fve', 'FvH4_4g04821' => 'fve', 'FvH4_4g31480' => 'fve', 'FvH4_7g01740' => 'fve', 'Glyma.05G130400' => 'gma', 'Glyma.05G156400' => 'gma', 'Glyma.07G197000' => 'gma', 'Glyma.08G085151' => 'gma', 'Glyma.08G114500' => 'gma', 'Glyma.08G300400' => 'gma', 'Glyma.10G215800' => 'gma', 'Glyma.12G224400' => 'gma', 'Glyma.13G179300' => 'gma', 'Glyma.13G218151' => 'gma', 'Glyma.13G238800' => 'gma', 'Glyma.13G276900' => 'gma', 'Glyma.14G078200' => 'gma', 'Glyma.15G074500' => 'gma', 'Glyma.15G094100' => 'gma', 'Glyma.17G247200' => 'gma', 'Glyma.18G120100' => 'gma', 'Glyma.20G176000' => 'gma', 'Gohir.A01G063600' => 'ghi', 'Gohir.A01G170301' => 'ghi', 'Gohir.A02G060500' => 'ghi', 'Gohir.A05G133850' => 'ghi', 'Gohir.A05G161400' => 'ghi', 'Gohir.A06G012900' => 'ghi', 'Gohir.A06G035901' => 'ghi', 'Gohir.A06G127100' => 'ghi', 'Gohir.A06G210500' => 'ghi', 'Gohir.A08G008650' => 'ghi', 'Gohir.A09G072700' => 'ghi', 'Gohir.A09G088301' => 'ghi', 'Gohir.A10G040600' => 'ghi', 'Gohir.A12G036300' => 'ghi', 'Gohir.A12G143350' => 'ghi', 'Gohir.A12G165500' => 'ghi', 'Gohir.A13G145700' => 'ghi', 'Gohir.D01G050000' => 'ghi', 'Gohir.D01G051366' => 'ghi', 'Gohir.D01G161350' => 'ghi', 'Gohir.D02G065900' => 'ghi', 'Gohir.D05G164200' => 'ghi', 'Gohir.D05G355500' => 'ghi', 'Gohir.D06G010400' => 'ghi', 'Gohir.D06G111250' => 'ghi', 'Gohir.D06G132000' => 'ghi', 'Gohir.D06G210500' => 'ghi', 'Gohir.D07G165675' => 'ghi', 'Gohir.D08G062240' => 'ghi', 'Gohir.D08G086101' => 'ghi', 'Gohir.D08G138060' => 'ghi', 'Gohir.D09G072300' => 'ghi', 'Gohir.D10G041400' => 'ghi', 'Gohir.D11G191020' => 'ghi', 'Gohir.D11G212066' => 'ghi', 'Gohir.D12G036300' => 'ghi', 'Gohir.D12G168600' => 'ghi', 'Gohir.D13G150600' => 'ghi', 'Gorai.001G057300' => 'gra', 'Gorai.002G069900' => 'gra', 'Gorai.002G200000' => 'gra', 'Gorai.003G067600' => 'gra', 'Gorai.005G074800' => 'gra', 'Gorai.006G087300' => 'gra', 'Gorai.008G037500' => 'gra', 'Gorai.008G181400' => 'gra', 'Gorai.009G169400' => 'gra', 'Gorai.009G387900' => 'gra', 'Gorai.010G013300' => 'gra', 'Gorai.010G153800' => 'gra', 'Gorai.010G255800' => 'gra', 'Gorai.011G043700' => 'gra', 'Gorai.011G198900' => 'gra', 'Gorai.013G168400' => 'gra', 'GSVIVG01005212001' => 'vvi', 'GSVIVG01006163001' => 'vvi', 'GSVIVG01009625001' => 'vvi', 'GSVIVG01014338001' => 'vvi', 'GSVIVG01020005001' => 'vvi', 'GSVIVG01021450001' => 'vvi', 'GSVIVG01023975001' => 'vvi', 'GSVIVG01034490001' => 'vvi', 'HanXRQChr04g0112071' => 'han', 'HanXRQChr05g0131151' => 'han', 'HanXRQChr09g0262371' => 'han', 'HanXRQChr09g0268401' => 'han', 'HanXRQChr10g0279241' => 'han', 'HanXRQChr10g0297961' => 'han', 'HanXRQChr11g0326231' => 'han', 'HanXRQChr11g0328471' => 'han', 'HanXRQChr16g0507941' => 'han', 'HanXRQChr17g0560211' => 'han', 'Haze_02108' => 'cav', 'Haze_02428' => 'cav', 'Haze_05593' => 'cav', 'Haze_06448' => 'cav', 'Haze_09427' => 'cav', 'Haze_12022' => 'cav', 'Haze_17612' => 'cav', 'Haze_17928' => 'cav', 'Hma1.2p1_0032F.1_g019250' => 'hma', 'Hma1.2p1_0163F.1_g072690' => 'hma', 'Hma1.2p1_0265F.1_g106710' => 'hma', 'Hma1.2p1_0286F.1_g113970' => 'hma', 'Hma1.2p1_0363F.1_g136640' => 'hma', 'Hma1.2p1_0584F.1_g183470' => 'hma', 'Hma1.2p1_0885F.1_g232570' => 'hma', 'HPP92_006022' => 'vpl', 'HPP92_007320' => 'vpl', 'HPP92_011521' => 'vpl', 'HPP92_019387' => 'vpl', 'HPP92_024038' => 'vpl', 'Hund05891' => 'sun', 'Hund06450' => 'sun', 'Hund12053' => 'sun', 'Hund16800' => 'sun', 'Hund21222' => 'sun', 'Hund22896' => 'sun', 'Hund23746' => 'sun', 'Hund27083' => 'sun', 'Lalb_Chr02g0141831' => 'lal', 'Lalb_Chr02g0141841' => 'lal', 'Lalb_Chr05g0220411' => 'lal', 'Lalb_Chr06g0162081' => 'lal', 'Lalb_Chr09g0327651' => 'lal', 'Lalb_Chr13g0295051' => 'lal', 'Lalb_Chr15g0086801' => 'lal', 'Lalb_Chr16g0383781' => 'lal', 'Lalb_Chr16g0383791' => 'lal', 'Lalb_Chr18g0055441' => 'lal', 'Lalb_Chr18g0059611' => 'lal', 'Lalb_Chr20g0109661' => 'lal', 'Lalb_Chr20g0109831' => 'lal', 'Lalb_Chr20g0121871' => 'lal', 'Lalb_Chr22g0355361' => 'lal', 'Lalb_Chr25g0286371' => 'lal', 'Lj1A1187G43' => 'lonja', 'Lj1A1205T50' => 'lonja', 'Lj1A800G33' => 'lonja', 'Lj1C1187T7' => 'lonja', 'Lj1C843T11' => 'lonja', 'Lj1g0010940' => 'lja', 'Lj2A288T69' => 'lonja', 'Lj3g0024276' => 'lja', 'Lj4A47T76' => 'lonja', 'Lj4g0005805' => 'lja', 'Lj4g0006097' => 'lja', 'Lj4g0008528' => 'lja', 'Lj4g0024907' => 'lja', 'Lj5g0012472' => 'lja', 'Lj5g0018648' => 'lja', 'Lj6C789G1' => 'lonja', 'Lj6g0004000' => 'lja', 'Lj7A292G67' => 'lonja', 'Lj7A292T64' => 'lonja', 'Lj9A400T58' => 'lonja', 'Lsat_1_v5_gn_1_126181' => 'lsa', 'Lsat_1_v5_gn_4_123041' => 'lsa', 'Lsat_1_v5_gn_4_133620' => 'lsa', 'Lsat_1_v5_gn_4_53221' => 'lsa', 'Lsat_1_v5_gn_4_71961' => 'lsa', 'Lsat_1_v5_gn_7_105241' => 'lsa', 'Lsat_1_v5_gn_7_21361' => 'lsa', 'Lsat_1_v5_gn_7_28860' => 'lsa', 'Lsat_1_v5_gn_7_31260' => 'lsa', 'Lsat_1_v5_gn_8_52801' => 'lsa', 'Manes.02G191400' => 'mes', 'Manes.03G110100' => 'mes', 'Manes.04G071100' => 'mes', 'Manes.05G100500' => 'mes', 'Manes.05G164700' => 'mes', 'Manes.15G087000' => 'mes', 'Manes.15G121500' => 'mes', 'Manes.16G028300' => 'mes', 'Manes.17G046100' => 'mes', 'Manes.17G069800' => 'mes', 'Manes.18G100500' => 'mes', 'Mapoly0002s0109' => 'mpo', 'Mapoly0024s0007' => 'mpo', 'Mapoly0089s0032' => 'mpo', 'MBI04_g42241_MAGBIO' => 'mbi', 'MBI05_g11988_MAGBIO' => 'mbi', 'MBI05_g35452_MAGBIO' => 'mbi', 'MBI07_g30179_MAGBIO' => 'mbi', 'MBI07_g35859_MAGBIO' => 'mbi', 'MBI07_g35860_MAGBIO' => 'mbi', 'MBI07_g37166_MAGBIO' => 'mbi', 'MBI08_g18172_MAGBIO' => 'mbi', 'MBI09_g08441_MAGBIO' => 'mbi', 'MBI13_g01676_MAGBIO' => 'mbi', 'MBI14_g42955_MAGBIO' => 'mbi', 'MBI16_g13161_MAGBIO' => 'mbi', 'MBI17_g27204_MAGBIO' => 'mbi', 'MBI19_g21595_MAGBIO' => 'mbi', 'MD00G1148400' => 'mdo', 'MD02G1301200' => 'mdo', 'MD03G1227800' => 'mdo', 'MD05G1041100' => 'mdo', 'MD05G1124800' => 'mdo', 'MD05G1284000' => 'mdo', 'MD05G1338800' => 'mdo', 'MD05G1338900' => 'mdo', 'MD07G1022800' => 'mdo', 'MD10G1047500' => 'mdo', 'MD10G1127500' => 'mdo', 'MD10G1262300' => 'mdo', 'MD10G1293800' => 'mdo', 'MD16G1074300' => 'mdo', 'Medtr1g021670' => 'mtr', 'Medtr1g096320' => 'mtr', 'Medtr2g013690' => 'mtr', 'Medtr2g019450' => 'mtr', 'Medtr2g085170' => 'mtr', 'Medtr4g088785' => 'mtr', 'Medtr8g055930' => 'mtr', 'Medtr8g085850' => 'mtr', 'MELO3C002605.2' => 'cme', 'MELO3C003891.2' => 'cme', 'MELO3C004012.2' => 'cme', 'MELO3C007134.2' => 'cme', 'MELO3C008118.2' => 'cme', 'MELO3C016700.2' => 'cme', 'MELO3C024127.2' => 'cme', 'MELO3C033361.2' => 'cme', 'MELO3C033362.2' => 'cme', 'Migut.C00430' => 'egut', 'Migut.C01246' => 'egut', 'Migut.E00101' => 'egut', 'Migut.H01486' => 'egut', 'Migut.H01939' => 'egut', 'Migut.K00360' => 'egut', 'Migut.M00910' => 'egut', 'Migut.M01139' => 'egut', 'Migut.N02677' => 'egut', 'MSTRG.13252' => 'ama', 'MSTRG.14701' => 'ama', 'MSTRG.1521' => 'ama', 'MSTRG.15884' => 'ama', 'MSTRG.16242' => 'ama', 'MSTRG.22285' => 'ama', 'MSTRG.22444' => 'ama', 'MSTRG.2349' => 'ama', 'MSTRG.26308' => 'ama', 'MSTRG.28296' => 'ama', 'MSTRG.9895' => 'ama', 'Nitab4.5_0000110g0060' => 'nta', 'Nitab4.5_0000420g0130' => 'nta', 'Nitab4.5_0000422g0030' => 'nta', 'Nitab4.5_0000560g0180' => 'nta', 'Nitab4.5_0000703g0100' => 'nta', 'Nitab4.5_0000786g0200' => 'nta', 'Nitab4.5_0001336g0020' => 'nta', 'Nitab4.5_0001796g0030' => 'nta', 'Nitab4.5_0003348g0060' => 'nta', 'Nitab4.5_0003698g0040' => 'nta', 'Nitab4.5_0003942g0090' => 'nta', 'Nitab4.5_0004775g0070' => 'nta', 'Nitab4.5_0004864g0030' => 'nta', 'Nitab4.5_0005615g0020' => 'nta', 'Nitab4.5_0009288g0030' => 'nta', 'Nitab4.5_0009341g0010' => 'nta', 'Nitab4.5_0009535g0010' => 'nta', 'Nn1g03995' => 'nnu', 'Nn1g04100' => 'nnu', 'Nn1g06530' => 'nnu', 'Nn3g16404' => 'nnu', 'Nn3g17212' => 'nnu', 'Nn3g20776' => 'nnu', 'Nn3g21923' => 'nnu', 'Nn5g27737' => 'nnu', 'Nn5g29461' => 'nnu', 'Nn7g38355' => 'nnu', 'Nn8g39873' => 'nnu', 'Oeu000548.2' => 'oeu', 'Oeu004672.1' => 'oeu', 'Oeu015605.2' => 'oeu', 'Oeu016092.1' => 'oeu', 'Oeu017879.3' => 'oeu', 'Oeu024910.1' => 'oeu', 'Oeu028965.1' => 'oeu', 'Oeu031269.1' => 'oeu', 'Oeu031270.1' => 'oeu', 'Oeu032535.1' => 'oeu', 'Oeu034151.1' => 'oeu', 'Oeu034152.1' => 'oeu', 'Oeu034588.2' => 'oeu', 'Oeu050846.1' => 'oeu', 'Oeu050849.2' => 'oeu', 'Oeu051063.2' => 'oeu', 'Oeu052368.1' => 'oeu', 'Oeu052370.1' => 'oeu', 'Os01g0210400' => 'osa', 'Os01g0304300' => 'osa', 'Os01g0749100' => 'osa', 'Os02g0745800' => 'osa', 'Os03g0769050' => 'osa', 'Os05g0531500' => 'osa', 'Os06g0724300' => 'osa', 'Os11g0198100' => 'osa', 'Peaxi162Scf00069g01425' => 'pax', 'Peaxi162Scf00280g00811' => 'pax', 'Peaxi162Scf00310g00615' => 'pax', 'Peaxi162Scf00362g00542' => 'pax', 'Peaxi162Scf00461g00310' => 'pax', 'Peaxi162Scf00530g00118' => 'pax', 'Peaxi162Scf00541g00057' => 'pax', 'Peaxi162Scf00661g00017' => 'pax', 'Peaxi162Scf00926g00027' => 'pax', 'Peaxi162Scf01064g00263' => 'pax', 'Peaxi162Scf01211g00135' => 'pax', 'PGR004G2336' => 'pgr', 'PGR042G0327' => 'pgr', 'PGR042G1957' => 'pgr', 'PGR042G2003' => 'pgr', 'PGR042G3929' => 'pgr', 'PGR083G1137' => 'pgr', 'PGR083G1364' => 'pgr', 'PGSC0003DMG400003381' => 'stu', 'PGSC0003DMG400003417' => 'stu', 'PGSC0003DMG400008981' => 'stu', 'PGSC0003DMG400012417' => 'stu', 'PGSC0003DMG400012823' => 'stu', 'PGSC0003DMG400016885' => 'stu', 'PGSC0003DMG400022812' => 'stu', 'PGSC0003DMG400029726' => 'stu', 'PGSC0003DMG401009243' => 'stu', 'PGSC0003DMG401031505' => 'stu', 'PGSC0003DMG402031505' => 'stu', 'Phvul.001G017600' => 'pvu', 'Phvul.002G193500' => 'pvu', 'Phvul.002G228900' => 'pvu', 'Phvul.002G236800' => 'pvu', 'Phvul.003G049500' => 'pvu', 'Phvul.005G072000' => 'pvu', 'Phvul.006G164800' => 'pvu', 'Phvul.006G185100' => 'pvu', 'Phvul.007G090000' => 'pvu', 'Potri.001G399800' => 'ptr', 'Potri.002G149900' => 'ptr', 'Potri.004G044100' => 'ptr', 'Potri.004G177600' => 'ptr', 'Potri.009G138000' => 'ptr', 'Potri.010G094000' => 'ptr', 'Potri.011G053000' => 'ptr', 'Potri.011G119300' => 'ptr', 'Potri.013G113700' => 'ptr', 'Potri.018G107800' => 'ptr', 'Potri.019G084100' => 'ptr', 'Pp3c14_23720' => 'ppa', 'Pp3c16_6340' => 'ppa', 'Pp3c23_13420' => 'ppa', 'Pp3c24_2740' => 'ppa', 'Pp3c25_860' => 'ppa', 'Pp3c8_21750' => 'ppa', 'Prupe.1G273000' => 'ppe', 'Prupe.1G273700' => 'ppe', 'Prupe.1G274100' => 'ppe', 'Prupe.2G023300' => 'ppe', 'Prupe.4G048000' => 'ppe', 'Prupe.4G080400' => 'ppe', 'Prupe.4G181200' => 'ppe', 'Prupe.8G056900' => 'ppe', 'Prupe.8G168700' => 'ppe', 'Psat1g189080' => 'psa', 'Psat1g204760' => 'psa', 'Psat4g175560' => 'psa', 'Psat4g177720' => 'psa', 'Psat5g244240' => 'psa', 'Psat6g010720' => 'psa', 'Psat6g187200' => 'psa', 'Psat7g072040' => 'psa', 'PSO017G3501' => 'pso', 'PSO063G2148' => 'pso', 'PSO063G5608' => 'pso', 'PSO210G6392' => 'pso', 'PSO541G2319' => 'pso', 'PSO541G2836' => 'pso', 'PSO541G4012' => 'pso', 'PSO541G6253' => 'pso', 'PSO675G0580' => 'pso', 'PSO675G0856' => 'pso', 'PSO675G5635' => 'pso', 'PSO675G9157' => 'pso', 'PSO832G1660' => 'pso', 'PSO832G1969' => 'pso', 'QL02p007186' => 'qlo', 'QL02p033904' => 'qlo', 'QL03p064391' => 'qlo', 'QL05p040593' => 'qlo', 'QL05p058242' => 'qlo', 'QL08p021825' => 'qlo', 'QL11p004981' => 'qlo', 'RcHm_v2.0_Chr1g0318301' => 'rch', 'RcHm_v2.0_Chr4g0418501' => 'rch', 'RcHm_v2.0_Chr4g0439971' => 'rch', 'RcHm_v2.0_Chr5g0008541' => 'rch', 'RcHm_v2.0_Chr5g0014101' => 'rch', 'RcHm_v2.0_Chr5g0014131' => 'rch', 'RcHm_v2.0_Chr5g0033621' => 'rch', 'RcHm_v2.0_Chr6g0272041' => 'rch', 'RcHm_v2.0_Chr6g0278831' => 'rch', 'Rhsim02G0130400' => 'rsi', 'Rhsim02G0171100' => 'rsi', 'Rhsim05G0053000' => 'rsi', 'Rhsim05G0053100' => 'rsi', 'Rhsim06G0096500' => 'rsi', 'Rhsim06G0096600' => 'rsi', 'Rhsim06G0199100' => 'rsi', 'Rhsim12G0062300' => 'rsi', 'Rhsim12G0062800' => 'rsi', 'Sabra02G0118600' => 'sbr', 'Sabra04G0027300' => 'sbr', 'Sabra04G0119500' => 'sbr', 'Sabra08G0112500' => 'sbr', 'Sabra11G0036800' => 'sbr', 'Sabra11G0103800' => 'sbr', 'Sabra13G0096300' => 'sbr', 'Sabra16G0262300' => 'sbr', 'Sabra18G0091700' => 'sbr', 'Sabra19G0095400' => 'sbr', 'SalBow6G3080' => 'sbo', 'SalBow7G1157' => 'sbo', 'SalBow7G2123' => 'sbo', 'SalBow7G2285' => 'sbo', 'SalBow7G3537' => 'sbo', 'SalBow8G2947' => 'sbo', 'SalBow8G4463' => 'sbo', 'SalBow8G5466' => 'sbo', 'Sc01g0001750' => 'sci', 'Sc02g0006640' => 'sci', 'Sc02g0006670' => 'sci', 'Sc04g0008220' => 'sci', 'Sc05g0006190' => 'sci', 'Sc08g0002760' => 'sci', 'Sc17g0006170' => 'sci', 'Sc22g0002050' => 'sci', 'Sc23g0001190' => 'sci', 'Sc24g0000980' => 'sci', 'Sed0006245' => 'sed', 'Sed0007543' => 'sed', 'Sed0009411' => 'sed', 'Sed0010765' => 'sed', 'Sed0012944' => 'sed', 'Sed0014682' => 'sed', 'Sed0016174' => 'sed', 'Sed0016796' => 'sed', 'Sed0020317' => 'sed', 'Sed0021467' => 'sed', 'SEGI_01316' => 'sgi', 'SEGI_03374' => 'sgi', 'SEGI_16265' => 'sgi', 'SEGI_18569' => 'sgi', 'SEGI_20351' => 'sgi', 'SEGI_26395' => 'sgi', 'SEGI_29469' => 'sgi', 'SEGI_34771' => 'sgi', 'SEGI_36769' => 'sgi', 'SEGI_37139' => 'sgi', 'SGA_v2.0_scaffold100G29687' => 'sas', 'SGA_v2.0_scaffold118G32472' => 'sas', 'SGA_v2.0_scaffold14G07051' => 'sas', 'SGA_v2.0_scaffold183G39845' => 'sas', 'SGA_v2.0_scaffold1G00174' => 'sas', 'SGA_v2.0_scaffold22G09714' => 'sas', 'SGA_v2.0_scaffold333G48992' => 'sas', 'SGA_v2.0_scaffold46G17491' => 'sas', 'SGA_v2.0_scaffold49G18294' => 'sas', 'SGA_v2.0_scaffold63G21658' => 'sas', 'SHI01741' => 'shi', 'SHI05771' => 'shi', 'SHI18077' => 'shi', 'SHI20525' => 'shi', 'SHI20527' => 'shi', 'SHI20528' => 'shi', 'SMO172G0185' => 'smo', 'SMO198G0020' => 'smo', 'SMO351G0006' => 'smo', 'SMO356G0118' => 'smo', 'SMO358G0296' => 'smo', 'SMO367G0079' => 'smo', 'SMO367G1277' => 'smo', 'Solyc01g014220.3' => 'sly', 'Solyc01g111770.2' => 'sly', 'Solyc02g078180.3' => 'sly', 'Solyc03g006430.3' => 'sly', 'Solyc03g006456.1' => 'sly', 'Solyc03g079860.2' => 'sly', 'Solyc04g079770.3' => 'sly', 'Solyc05g007430.4' => 'sly', 'Solyc07g063150.3' => 'sly', 'Solyc08g016620.3' => 'sly', 'Solyc09g057590.3' => 'sly', 'Solyc09g057600.1' => 'sly', 'Solyc10g009050.3' => 'sly', 'Solyc11g017420.2' => 'sly', 'Sopen01g053810' => 'spe', 'Sopen02g023040' => 'spe', 'Sopen03g002440' => 'spe', 'Sopen04g033350' => 'spe', 'Sopen05g003310' => 'spe', 'Sopen07g004050' => 'spe', 'Sopen07g031340' => 'spe', 'Sopen08g006990' => 'spe', 'Sopen10g004830' => 'spe', 'Sopen11g009370' => 'spe', 'Sp1g24450' => 'spa', 'Sp1g29670' => 'spa', 'Sp1g39600' => 'spa', 'Sp2g11080' => 'spa', 'Sp2g13970' => 'spa', 'Sp4g16130' => 'spa', 'Sp6g13080' => 'spa', 'Sp7g37270' => 'spa', 'TAR371G0065' => 'tar', 'TAR376G0340' => 'tar', 'TAR376G0435' => 'tar', 'TAR381G0002' => 'tar', 'TAR381G1236' => 'tar', 'TAR624G0055' => 'tar', 'TAR624G0324' => 'tar', 'TAR624G0696' => 'tar', 'TAR624G0906' => 'tar', 'TAR625G0107' => 'tar', 'TAR626G0015' => 'tar', 'TAR626G1356' => 'tar', 'TAR627G0888' => 'tar', 'TAR628G0399' => 'tar', 'TAR628G1327' => 'tar', 'TAR629G2831' => 'tar', 'TAR629G2874' => 'tar', 'TAR633G1432' => 'tar', 'TAR633G2771' => 'tar', 'THA.LOC104803394' => 'tha', 'THA.LOC104805153' => 'tha', 'THA.LOC104806784' => 'tha', 'THA.LOC104810473' => 'tha', 'THA.LOC104813100' => 'tha', 'THA.LOC104814215' => 'tha', 'THA.LOC104815554' => 'tha', 'THA.LOC104820544' => 'tha', 'THA.LOC104824754' => 'tha', 'THA.LOC104827717' => 'tha', 'Thecc.02G031400' => 'tca', 'Thecc.02G055900' => 'tca', 'Thecc.02G350800' => 'tca', 'Thecc.06G150900' => 'tca', 'Thecc.06G186600' => 'tca', 'Thecc.07G089600' => 'tca', 'Thecc.08G020400' => 'tca', 'Thecc.08G182100' => 'tca', 'Thhalv10000873m.g' => 'esa', 'Thhalv10004185m.g' => 'esa', 'Thhalv10006981m.g' => 'esa', 'Thhalv10007204m.g' => 'esa', 'Thhalv10011374m.g' => 'esa', 'Thhalv10013482m.g' => 'esa', 'Thhalv10017801m.g' => 'esa', 'Thhalv10024983m.g' => 'esa', 'TPR.G12072' => 'tpr', 'TPR.G15769' => 'tpr', 'TPR.G16504' => 'tpr', 'TPR.G16506' => 'tpr', 'TPR.G24345' => 'tpr', 'TPR.G26666' => 'tpr', 'TPR.G27320' => 'tpr', 'TPR.G31819' => 'tpr', 'TPR.G38879' => 'tpr', 'TPR.G39015' => 'tpr', 'TPR.G8819' => 'tpr', 'TWI09G0924' => 'twi', 'TWI12G0811' => 'twi', 'TWI12G1294' => 'twi', 'TWI31G0150' => 'twi', 'TWI36G1262' => 'twi', 'TWI38G1287' => 'twi', 'TWI38G1633' => 'twi', 'TWI38G1982' => 'twi', 'TWI39G0116' => 'twi', 'TWI60G1011' => 'twi', 'TWI63G0171' => 'twi', 'TWI73G0839' => 'twi', 'TWI79G1511' => 'twi', 'unitig_0.g915' => 'ugi', 'unitig_0.g916' => 'ugi', 'unitig_21.g20219' => 'ugi', 'unitig_21.g20416' => 'ugi', 'unitig_578.g16132' => 'ugi', 'unitig_578.g16718' => 'ugi', 'unitig_62.g23481' => 'ugi', 'unitig_744.g24535' => 'ugi', 'unitig_749.g13525' => 'ugi', 'vmacro01248' => 'vma', 'vmacro02290' => 'vma', 'vmacro10946' => 'vma', 'vmacro11865' => 'vma', 'vmacro12493' => 'vma', 'vmacro17322' => 'vma', 'vmacro21599' => 'vma', 'vmacro23041' => 'vma', 'VMungo0251G0004' => 'vmu', 'VMungo0251G2639' => 'vmu', 'VMungo0251G2967' => 'vmu', 'VMungo0540G0864' => 'vmu', 'VMungo0540G1569' => 'vmu', 'VMungo0647G0317' => 'vmu', 'VMungo0720G1373' => 'vmu', 'VMungo0720G1508' => 'vmu', 'VMungo1080G0485' => 'vmu', 'VMungo1215G3177' => 'vmu', 'Zm00001eb112600' => 'zma', 'Zm00001eb120220' => 'zma', 'Zm00001eb153240' => 'zma', 'Zm00001eb168880' => 'zma', 'Zm00001eb213920' => 'zma', 'Zm00001eb228280' => 'zma', 'Zm00001eb254580' => 'zma', 'Zm00001eb272180' => 'zma', 'Zm00001eb293190' => 'zma', 'Zm00001eb322930' => 'zma', 'Zm00001eb353360' => 'zma', 'Zm00001eb353390' => 'zma', 'Zm00001eb353430' => 'zma', 'Zm00001eb353440' => 'zma', 'Zm00001eb353780' => 'zma' ) $gf_id = 'HOM05D000499' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000499' ) $data_identifier = 'HOM05D000499' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 29, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 12, 'amhyb' => (int) 8, 'aly' => (int) 12, 'aox' => (int) 9, 'arhy' => (int) 26, 'ath' => (int) 8, 'atr' => (int) 7, 'acertr' => (int) 10, 'cqu' => (int) 15, 'bca' => (int) 29, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 11, 'cansat' => (int) 8, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 9, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 8, 'cpa' => (int) 10, 'csa' => (int) 7, 'camsi' => (int) 20, 'dca' => (int) 8, 'din' => (int) 12, 'dzi' => (int) 14, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 6, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 38, 'gra' => (int) 16, 'vvi' => (int) 8, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 5, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 11, 'lja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 11, 'mpo' => (int) 3, 'mbi' => (int) 14, 'mdo' => (int) 14, 'mtr' => (int) 8, 'cme' => (int) 9, 'egut' => (int) 9, 'ama' => (int) 11, 'nta' => (int) 17, 'nnu' => (int) 11, 'oeu' => (int) 18, 'osa' => (int) 8, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 6, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 9, 'rsi' => (int) 9, 'sbr' => (int) 10, 'sbo' => (int) 8, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 10, 'sas' => (int) 10, 'shi' => (int) 6, 'smo' => (int) 7, 'sly' => (int) 14, 'spe' => (int) 10, 'spa' => (int) 8, 'tar' => (int) 19, 'tha' => (int) 10, 'tca' => (int) 8, 'esa' => (int) 8, 'tpr' => (int) 11, 'twi' => (int) 13, 'ugi' => (int) 9, 'vma' => (int) 8, 'vmu' => (int) 10, 'zma' => (int) 15 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb353780' $species_info = array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ) $local_species = 'vmu' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000499', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1066', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p29780' => 'bna', 'A02p33180' => 'bna', 'A03p16470' => 'bna', 'A03p66010' => 'bna', 'A04p25970' => 'bna', 'A06p01270' => 'bna', 'A06p46080' => 'bna', 'A07p11400' => 'bna', 'A08p01840' => 'bna', 'A08p08230' => 'bna', 'A08p25740' => 'bna', 'A09p32070' => 'bna', 'A09p37830' => 'bna', 'A09p42840' => 'bna', 'A09p42850' => 'bna', 'Aa31LG10G2060' => 'aar', 'Aa31LG2G7410' => 'aar', 'Aa31LG6G10200' => 'aar', 'Aa31LG6G16680' => 'aar', 'Aa31LG6G8470' => 'aar', 'Aa31LG9G12730' => 'aar', 'Aa31LG9G13680' => 'aar', 'Aa31LG9G14920' => 'aar', 'Aa31LG9G6650' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4977' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5467' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3254' => 'aag', 'Actinidia02578' => 'ach', 'Actinidia07693' => 'ach', 'Actinidia08413' => 'ach', 'Actinidia08414' => 'ach', 'Actinidia15289' => 'ach', 'Actinidia19871' => 'ach', 'Actinidia21475' => 'ach', 'Actinidia22576' => 'ach', 'Actinidia28327' => 'ach', 'Actinidia32491' => 'ach', 'Actinidia39463' => 'ach', 'Actinidia39571' => 'ach', 'Ah.01g013750' => 'amhyb', 'Ah.01g023210' => 'amhyb', 'Ah.04g164850' => 'amhyb', 'Ah.05g178060' => 'amhyb', 'Ah.07g204270' => 'amhyb', 'Ah.07g208480' => 'amhyb', 'Ah.09g237410' => 'amhyb', 'Ah.14g089460' => 'amhyb', 'AL1G41790' => 'aly', 'AL1G49050' => 'aly', 'AL1G53810' => 'aly', 'AL1G61400' => 'aly', 'AL4G18580' => 'aly', 'AL5G12510' => 'aly', 'AL5G12540' => 'aly', 'AL6G43230' => 'aly', 'AL7G10370' => 'aly', 'AL7G19250' => 'aly', 'AL8G12240' => 'aly', 'AL8G18540' => 'aly', 'Aqoxy1G02409' => 'aox', 'Aqoxy2G03993' => 'aox', 'Aqoxy3G03357' => 'aox', 'Aqoxy4G00785' => 'aox', 'Aqoxy5G02598' => 'aox', 'Aqoxy6G00132' => 'aox', 'Aqoxy7G01776' => 'aox', 'Aqoxy7G02316' => 'aox', 'Aqoxy7G03973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.12AFKW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B8730' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27IQR1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3F75VG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3RE0GA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41TCQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.527VTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FIR39' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5W8UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DA38EV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ63HS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H1I32C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HC27T5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4M8AP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7N3CZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9UVDZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LS1NQA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT1D4B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SKC4TM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCFV76' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF9Q1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQWD9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1ZM88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WE07RT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YCK7VH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJE6Q6' => 'arhy', 'AT1G28240' => 'ath', 'AT1G34550' => 'ath', 'AT1G53040' => 'ath', 'AT2G02910' => 'ath', 'AT4G09630' => 'ath', 'AT4G38500' => 'ath', 'AT5G42660' => 'ath', 'AT5G46220' => 'ath', 'ATR0152G026' => 'atr', 'ATR0564G343' => 'atr', 'ATR0706G151' => 'atr', 'ATR0733G207' => 'atr', 'ATR0751G234' => 'atr', 'ATR0807G048' => 'atr', 'ATR1091G084' => 'atr', 'Atru.chr10.1229' => 'acertr', 'Atru.chr10.1230' => 'acertr', 'Atru.chr10.1874' => 'acertr', 'Atru.chr11.1808' => 'acertr', 'Atru.chr13.1795' => 'acertr', 'Atru.chr13.570' => 'acertr', 'Atru.chr2.2608' => 'acertr', 'Atru.chr2.2609' => 'acertr', 'Atru.chr5.3428' => 'acertr', 'Atru.chr8.1171' => 'acertr', 'AUR62004651' => 'cqu', 'AUR62008675' => 'cqu', 'AUR62010014' => 'cqu', 'AUR62013004' => 'cqu', 'AUR62014825' => 'cqu', 'AUR62015015' => 'cqu', 'AUR62015151' => 'cqu', 'AUR62017020' => 'cqu', 'AUR62019422' => 'cqu', 'AUR62023570' => 'cqu', 'AUR62025571' => 'cqu', 'AUR62029098' => 'cqu', 'AUR62033863' => 'cqu', 'AUR62034296' => 'cqu', 'AUR62040075' => 'cqu', 'BcaB02g07334' => 'bca', 'BcaB02g10575' => 'bca', 'BcaB03g12119' => 'bca', 'BcaB03g12120' => 'bca', 'BcaB03g13945' => 'bca', 'BcaB04g17123' => 'bca', 'BcaB04g17867' => 'bca', 'BcaB04g19839' => 'bca', 'BcaB07g30317' => 'bca', 'BcaB07g32432' => 'bca', 'BcaB07g33362' => 'bca', 'BcaB08g36611' => 'bca', 'BcaC01g00028' => 'bca', 'BcaC01g01356' => 'bca', 'BcaC01g02034' => 'bca', 'BcaC01g06051' => 'bca', 'BcaC03g16839' => 'bca', 'BcaC03g17176' => 'bca', 'BcaC05g26829' => 'bca', 'BcaC06g31490' => 'bca', 'BcaC06g35344' => 'bca', 'BcaC06g36570' => 'bca', 'BcaC07g37537' => 'bca', 'BcaC08g43491' => 'bca', 'BcaC08g43773' => 'bca', 'BcaNung00234' => 'bca', 'BcaNung01982' => 'bca', 'BcaNung03707' => 'bca', 'BcaNung06454' => 'bca', 'BolC2t10762H' => 'bol', 'BolC2t11191H' => 'bol', 'BolC3t14322H' => 'bol', 'BolC3t19747H' => 'bol', 'BolC3t21425H' => 'bol', 'BolC4t27800H' => 'bol', 'BolC5t31423H' => 'bol', 'BolC6t35951H' => 'bol', 'BolC6t36282H' => 'bol', 'BolC7t40678H' => 'bol', 'BolC7t40679H' => 'bol', 'BolC7t42222H' => 'bol', 'BolC7t43492H' => 'bol', 'BolC7t46785H' => 'bol', 'BolC8t47853H' => 'bol', 'BolC9t56805H' => 'bol', 'BraA02t08000Z' => 'bra', 'BraA02t08341Z' => 'bra', 'BraA03t10936Z' => 'bra', 'BraA03t15657Z' => 'bra', 'BraA04t18100Z' => 'bra', 'BraA05t20523Z' => 'bra', 'BraA06t23353Z' => 'bra', 'BraA06t27473Z' => 'bra', 'BraA06t27769Z' => 'bra', 'BraA07t28928Z' => 'bra', 'BraA08t32236Z' => 'bra', 'BraA08t32841Z' => 'bra', 'BraA08t34524Z' => 'bra', 'BraA09t38742Z' => 'bra', 'BraA09t39295Z' => 'bra', 'C02p47180' => 'bna', 'C02p50990' => 'bna', 'C03p19360' => 'bna', 'C03p74950' => 'bna', 'C03p91000' => 'bna', 'C04p63260' => 'bna', 'C05p27050' => 'bna', 'C06p08750' => 'bna', 'C06p11490' => 'bna', 'C07p02820' => 'bna', 'C07p17180' => 'bna', 'C07p29440' => 'bna', 'C07p63730' => 'bna', 'C09p39260' => 'bna', 'CAN.G1164.34' => 'can', 'CAN.G1164.39' => 'can', 'CAN.G1530.3' => 'can', 'CAN.G162.61' => 'can', 'CAN.G176.6' => 'can', 'CAN.G289.49' => 'can', 'CAN.G370.21' => 'can', 'CAN.G370.22' => 'can', 'CAN.G371.117' => 'can', 'CAN.G58.37' => 'can', 'CAN.G588.98' => 'can', 'CANSAT21G2266' => 'cansat', 'CANSAT25G2799' => 'cansat', 'CANSAT35G0862' => 'cansat', 'CANSAT35G1704' => 'cansat', 'CANSAT35G1760' => 'cansat', 'CANSAT56G3971' => 'cansat', 'CANSAT56G4116' => 'cansat', 'CANSAT80G1259' => 'cansat', 'CARHR027730' => 'chi', 'CARHR033880' => 'chi', 'CARHR043270' => 'chi', 'CARHR145330' => 'chi', 'CARHR145340' => 'chi', 'CARHR175570' => 'chi', 'CARHR181570' => 'chi', 'CARHR258470' => 'chi', 'CARHR260490' => 'chi', 'CARHR294220' => 'chi', 'Carub.0001s2668' => 'cru', 'Carub.0001s3257' => 'cru', 'Carub.0001s4220' => 'cru', 'Carub.0005s0179' => 'cru', 'Carub.0006s2807' => 'cru', 'Carub.0007s0039' => 'cru', 'Carub.0008s0169' => 'cru', 'Carub.0008s0636' => 'cru', 'Ca_00338_v3' => 'car', 'Ca_00542_v3' => 'car', 'Ca_01844_v3' => 'car', 'Ca_10611_v3' => 'car', 'Ca_13326_v3' => 'car', 'Ca_17944_v3' => 'car', 'Ca_18546_v3' => 'car', 'Ca_24219_v3' => 'car', 'Ca_29972_v3' => 'car', 'CBR_g3681' => 'cbr', 'CBR_g40021' => 'cbr', 'Cc01_g08140' => 'ccan', 'Cc02_g13410' => 'ccan', 'Cc02_g37480' => 'ccan', 'Cc05_g12030' => 'ccan', 'Cc09_g03370' => 'ccan', 'Cc09_g10300' => 'ccan', 'Cc10_g03530' => 'ccan', 'Cc10_g11380' => 'ccan', 'CDE01G0176' => 'cde', 'CDE02G0675' => 'cde', 'CDE02G0942' => 'cde', 'CDE02G1153' => 'cde', 'CDE02G4177' => 'cde', 'CDE04G2117' => 'cde', 'CDE04G2736' => 'cde', 'CDE08G1161' => 'cde', 'CDE09G1238' => 'cde', 'Cfa000467' => 'cfa', 'Cfa000947' => 'cfa', 'Cfa004969' => 'cfa', 'Cfa005284' => 'cfa', 'Cfa008993' => 'cfa', 'Cfa018187' => 'cfa', 'Cfa018454' => 'cfa', 'Cfa020585' => 'cfa', 'Ciclev10000424m.g' => 'ccl', 'Ciclev10003605m.g' => 'ccl', 'Ciclev10007828m.g' => 'ccl', 'Ciclev10014620m.g' => 'ccl', 'Ciclev10015169m.g' => 'ccl', 'Ciclev10018291m.g' => 'ccl', 'Ciclev10028256m.g' => 'ccl', 'Ciclev10033822m.g' => 'ccl', 'CiPaw.05G060300' => 'cil', 'CiPaw.05G085000' => 'cil', 'CiPaw.06G083700' => 'cil', 'CiPaw.06G120300' => 'cil', 'CiPaw.09G060500' => 'cil', 'CiPaw.09G123800' => 'cil', 'CiPaw.11G169700' => 'cil', 'CiPaw.12G118300' => 'cil', 'CiPaw.15G071000' => 'cil', 'CiPaw.15G081900' => 'cil', 'ClCG01G024610' => 'cla', 'ClCG03G006070' => 'cla', 'ClCG05G019250' => 'cla', 'ClCG09G009500' => 'cla', 'ClCG11G008200' => 'cla', 'ClCG11G018080' => 'cla', 'COL.COLO4_17373' => 'col', 'COL.COLO4_22994' => 'col', 'COL.COLO4_26389' => 'col', 'COL.COLO4_27170' => 'col', 'COL.COLO4_31074' => 'col', 'COL.COLO4_31465' => 'col', 'COL.COLO4_36438' => 'col', 'COL.COLO4_36439' => 'col', 'Cpa.g.c38781' => 'cpa', 'Cpa.g.sc128.12' => 'cpa', 'Cpa.g.sc166.7' => 'cpa', 'Cpa.g.sc166.8' => 'cpa', 'Cpa.g.sc20.111' => 'cpa', 'Cpa.g.sc27.31' => 'cpa', 'Cpa.g.sc64.36' => 'cpa', 'Cpa.g.sc64.37' => 'cpa', 'Cpa.g.sc66.49' => 'cpa', 'Cpa.g.sc80.64' => 'cpa', 'CsaV3_1G012320' => 'csa', 'CsaV3_2G008480' => 'csa', 'CsaV3_2G033450' => 'csa', 'CsaV3_3G044830' => 'csa', 'CsaV3_4G033710' => 'csa', 'CsaV3_6G051730' => 'csa', 'CsaV3_7G025350' => 'csa', 'CSS0001067' => 'camsi', 'CSS0005996' => 'camsi', 'CSS0006590' => 'camsi', 'CSS0009673' => 'camsi', 'CSS0010201' => 'camsi', 'CSS0010549' => 'camsi', 'CSS0011364' => 'camsi', 'CSS0014473' => 'camsi', 'CSS0014961' => 'camsi', 'CSS0020191' => 'camsi', 'CSS0021165' => 'camsi', 'CSS0022306' => 'camsi', 'CSS0030591' => 'camsi', 'CSS0030696' => 'camsi', 'CSS0032653' => 'camsi', 'CSS0037487' => 'camsi', 'CSS0041102' => 'camsi', 'CSS0041261' => 'camsi', 'CSS0046246' => 'camsi', 'CSS0049256' => 'camsi', 'DCAR_004075' => 'dca', 'DCAR_011538' => 'dca', 'DCAR_019553' => 'dca', 'DCAR_020952' => 'dca', 'DCAR_021739' => 'dca', 'DCAR_027407' => 'dca', 'DCAR_027913' => 'dca', 'DCAR_028066' => 'dca', 'Dinv05899' => 'din', 'Dinv07563' => 'din', 'Dinv08010' => 'din', 'Dinv14125' => 'din', 'Dinv20172' => 'din', 'Dinv30743' => 'din', 'Dinv31229' => 'din', 'Dinv34162' => 'din', 'Dinv36028' => 'din', 'Dinv39368' => 'din', 'Dinv40565' => 'din', 'Dinv41706' => 'din', 'Duzib052G0089' => 'dzi', 'Duzib116G0641' => 'dzi', 'Duzib132G0069' => 'dzi', 'Duzib132G1219' => 'dzi', 'Duzib147G0278' => 'dzi', 'Duzib160G0480' => 'dzi', 'Duzib170G0661' => 'dzi', 'Duzib177G0591' => 'dzi', 'Duzib187G1353' => 'dzi', 'Duzib192G0858' => 'dzi', 'Duzib192G0883' => 'dzi', 'Duzib213G0506' => 'dzi', 'Duzib235G0289' => 'dzi', 'Duzib251G0422' => 'dzi', 'ECA232G3898' => 'eca', 'ECA233G5950' => 'eca', 'ECA234G1699' => 'eca', 'ECA234G2421' => 'eca', 'ECA236G0426' => 'eca', 'ECA236G4331' => 'eca', 'ECA248G2573' => 'eca', 'EL10Ac1g00077' => 'bvu', 'EL10Ac1g01746' => 'bvu', 'EL10Ac2g03464' => 'bvu', 'EL10Ac4g08176' => 'bvu', 'EL10Ac7g17521' => 'bvu', 'EL10Ac8g20386' => 'bvu', 'EL10Ac9g21343' => 'bvu', 'EL10Ac9g22688' => 'bvu', 'Eucgr.B03434' => 'egr', 'Eucgr.D00618' => 'egr', 'Eucgr.E02395' => 'egr', 'Eucgr.F01129' => 'egr', 'Eucgr.F02622' => 'egr', 'Eucgr.F04207' => 'egr', 'FAN01G0570' => 'fan', 'FAN03G3351' => 'fan', 'FAN06G3702' => 'fan', 'FAN07G2149' => 'fan', 'FAN10G3758' => 'fan', 'FAN11G1170' => 'fan', 'FAN11G2050' => 'fan', 'FAN11G2724' => 'fan', 'FAN12G1700' => 'fan', 'FAN12G2028' => 'fan', 'FAN15G1160' => 'fan', 'FAN15G3063' => 'fan', 'FAN16G2540' => 'fan', 'FAN16G3077' => 'fan', 'FAN16G3624' => 'fan', 'FAN17G0221' => 'fan', 'FAN20G2492' => 'fan', 'FAN20G2905' => 'fan', 'FAN21G0548' => 'fan', 'FAN21G1300' => 'fan', 'FAN22G0077' => 'fan', 'FAN22G1315' => 'fan', 'FAN24G1280' => 'fan', 'FAN24G1445' => 'fan', 'FAN24G3527' => 'fan', 'FAN25G0464' => 'fan', 'FAN25G2885' => 'fan', 'FAN25G3270' => 'fan', 'FAN27G1101' => 'fan', 'FAN27G2846' => 'fan', 'FAN27G3524' => 'fan', 'FvH4_2g11770' => 'fve', 'FvH4_2g15630' => 'fve', 'FvH4_3g05570' => 'fve', 'FvH4_3g09110' => 'fve', 'FvH4_3g19940' => 'fve', 'FvH4_4g04821' => 'fve', 'FvH4_4g31480' => 'fve', 'FvH4_7g01740' => 'fve', 'Glyma.05G130400' => 'gma', 'Glyma.05G156400' => 'gma', 'Glyma.07G197000' => 'gma', 'Glyma.08G085151' => 'gma', 'Glyma.08G114500' => 'gma', 'Glyma.08G300400' => 'gma', 'Glyma.10G215800' => 'gma', 'Glyma.12G224400' => 'gma', 'Glyma.13G179300' => 'gma', 'Glyma.13G218151' => 'gma', 'Glyma.13G238800' => 'gma', 'Glyma.13G276900' => 'gma', 'Glyma.14G078200' => 'gma', 'Glyma.15G074500' => 'gma', 'Glyma.15G094100' => 'gma', 'Glyma.17G247200' => 'gma', 'Glyma.18G120100' => 'gma', 'Glyma.20G176000' => 'gma', 'Gohir.A01G063600' => 'ghi', 'Gohir.A01G170301' => 'ghi', 'Gohir.A02G060500' => 'ghi', 'Gohir.A05G133850' => 'ghi', 'Gohir.A05G161400' => 'ghi', 'Gohir.A06G012900' => 'ghi', 'Gohir.A06G035901' => 'ghi', 'Gohir.A06G127100' => 'ghi', 'Gohir.A06G210500' => 'ghi', 'Gohir.A08G008650' => 'ghi', 'Gohir.A09G072700' => 'ghi', 'Gohir.A09G088301' => 'ghi', 'Gohir.A10G040600' => 'ghi', 'Gohir.A12G036300' => 'ghi', 'Gohir.A12G143350' => 'ghi', 'Gohir.A12G165500' => 'ghi', 'Gohir.A13G145700' => 'ghi', 'Gohir.D01G050000' => 'ghi', 'Gohir.D01G051366' => 'ghi', 'Gohir.D01G161350' => 'ghi', 'Gohir.D02G065900' => 'ghi', 'Gohir.D05G164200' => 'ghi', 'Gohir.D05G355500' => 'ghi', 'Gohir.D06G010400' => 'ghi', 'Gohir.D06G111250' => 'ghi', 'Gohir.D06G132000' => 'ghi', 'Gohir.D06G210500' => 'ghi', 'Gohir.D07G165675' => 'ghi', 'Gohir.D08G062240' => 'ghi', 'Gohir.D08G086101' => 'ghi', 'Gohir.D08G138060' => 'ghi', 'Gohir.D09G072300' => 'ghi', 'Gohir.D10G041400' => 'ghi', 'Gohir.D11G191020' => 'ghi', 'Gohir.D11G212066' => 'ghi', 'Gohir.D12G036300' => 'ghi', 'Gohir.D12G168600' => 'ghi', 'Gohir.D13G150600' => 'ghi', 'Gorai.001G057300' => 'gra', 'Gorai.002G069900' => 'gra', 'Gorai.002G200000' => 'gra', 'Gorai.003G067600' => 'gra', 'Gorai.005G074800' => 'gra', 'Gorai.006G087300' => 'gra', 'Gorai.008G037500' => 'gra', 'Gorai.008G181400' => 'gra', 'Gorai.009G169400' => 'gra', 'Gorai.009G387900' => 'gra', 'Gorai.010G013300' => 'gra', 'Gorai.010G153800' => 'gra', 'Gorai.010G255800' => 'gra', 'Gorai.011G043700' => 'gra', 'Gorai.011G198900' => 'gra', 'Gorai.013G168400' => 'gra', 'GSVIVG01005212001' => 'vvi', 'GSVIVG01006163001' => 'vvi', 'GSVIVG01009625001' => 'vvi', 'GSVIVG01014338001' => 'vvi', 'GSVIVG01020005001' => 'vvi', 'GSVIVG01021450001' => 'vvi', 'GSVIVG01023975001' => 'vvi', 'GSVIVG01034490001' => 'vvi', 'HanXRQChr04g0112071' => 'han', 'HanXRQChr05g0131151' => 'han', 'HanXRQChr09g0262371' => 'han', 'HanXRQChr09g0268401' => 'han', 'HanXRQChr10g0279241' => 'han', 'HanXRQChr10g0297961' => 'han', 'HanXRQChr11g0326231' => 'han', 'HanXRQChr11g0328471' => 'han', 'HanXRQChr16g0507941' => 'han', 'HanXRQChr17g0560211' => 'han', 'Haze_02108' => 'cav', 'Haze_02428' => 'cav', 'Haze_05593' => 'cav', 'Haze_06448' => 'cav', 'Haze_09427' => 'cav', 'Haze_12022' => 'cav', 'Haze_17612' => 'cav', 'Haze_17928' => 'cav', 'Hma1.2p1_0032F.1_g019250' => 'hma', 'Hma1.2p1_0163F.1_g072690' => 'hma', 'Hma1.2p1_0265F.1_g106710' => 'hma', 'Hma1.2p1_0286F.1_g113970' => 'hma', 'Hma1.2p1_0363F.1_g136640' => 'hma', 'Hma1.2p1_0584F.1_g183470' => 'hma', 'Hma1.2p1_0885F.1_g232570' => 'hma', 'HPP92_006022' => 'vpl', 'HPP92_007320' => 'vpl', 'HPP92_011521' => 'vpl', 'HPP92_019387' => 'vpl', 'HPP92_024038' => 'vpl', 'Hund05891' => 'sun', 'Hund06450' => 'sun', 'Hund12053' => 'sun', 'Hund16800' => 'sun', 'Hund21222' => 'sun', 'Hund22896' => 'sun', 'Hund23746' => 'sun', 'Hund27083' => 'sun', 'Lalb_Chr02g0141831' => 'lal', 'Lalb_Chr02g0141841' => 'lal', 'Lalb_Chr05g0220411' => 'lal', 'Lalb_Chr06g0162081' => 'lal', 'Lalb_Chr09g0327651' => 'lal', 'Lalb_Chr13g0295051' => 'lal', 'Lalb_Chr15g0086801' => 'lal', 'Lalb_Chr16g0383781' => 'lal', 'Lalb_Chr16g0383791' => 'lal', 'Lalb_Chr18g0055441' => 'lal', 'Lalb_Chr18g0059611' => 'lal', 'Lalb_Chr20g0109661' => 'lal', 'Lalb_Chr20g0109831' => 'lal', 'Lalb_Chr20g0121871' => 'lal', 'Lalb_Chr22g0355361' => 'lal', 'Lalb_Chr25g0286371' => 'lal', 'Lj1A1187G43' => 'lonja', 'Lj1A1205T50' => 'lonja', 'Lj1A800G33' => 'lonja', 'Lj1C1187T7' => 'lonja', 'Lj1C843T11' => 'lonja', 'Lj1g0010940' => 'lja', 'Lj2A288T69' => 'lonja', 'Lj3g0024276' => 'lja', 'Lj4A47T76' => 'lonja', 'Lj4g0005805' => 'lja', 'Lj4g0006097' => 'lja', 'Lj4g0008528' => 'lja', 'Lj4g0024907' => 'lja', 'Lj5g0012472' => 'lja', 'Lj5g0018648' => 'lja', 'Lj6C789G1' => 'lonja', 'Lj6g0004000' => 'lja', 'Lj7A292G67' => 'lonja', 'Lj7A292T64' => 'lonja', 'Lj9A400T58' => 'lonja', 'Lsat_1_v5_gn_1_126181' => 'lsa', 'Lsat_1_v5_gn_4_123041' => 'lsa', 'Lsat_1_v5_gn_4_133620' => 'lsa', 'Lsat_1_v5_gn_4_53221' => 'lsa', 'Lsat_1_v5_gn_4_71961' => 'lsa', 'Lsat_1_v5_gn_7_105241' => 'lsa', 'Lsat_1_v5_gn_7_21361' => 'lsa', 'Lsat_1_v5_gn_7_28860' => 'lsa', 'Lsat_1_v5_gn_7_31260' => 'lsa', 'Lsat_1_v5_gn_8_52801' => 'lsa', 'Manes.02G191400' => 'mes', 'Manes.03G110100' => 'mes', 'Manes.04G071100' => 'mes', 'Manes.05G100500' => 'mes', 'Manes.05G164700' => 'mes', 'Manes.15G087000' => 'mes', 'Manes.15G121500' => 'mes', 'Manes.16G028300' => 'mes', 'Manes.17G046100' => 'mes', 'Manes.17G069800' => 'mes', 'Manes.18G100500' => 'mes', 'Mapoly0002s0109' => 'mpo', 'Mapoly0024s0007' => 'mpo', 'Mapoly0089s0032' => 'mpo', 'MBI04_g42241_MAGBIO' => 'mbi', 'MBI05_g11988_MAGBIO' => 'mbi', 'MBI05_g35452_MAGBIO' => 'mbi', 'MBI07_g30179_MAGBIO' => 'mbi', 'MBI07_g35859_MAGBIO' => 'mbi', 'MBI07_g35860_MAGBIO' => 'mbi', 'MBI07_g37166_MAGBIO' => 'mbi', 'MBI08_g18172_MAGBIO' => 'mbi', 'MBI09_g08441_MAGBIO' => 'mbi', 'MBI13_g01676_MAGBIO' => 'mbi', 'MBI14_g42955_MAGBIO' => 'mbi', 'MBI16_g13161_MAGBIO' => 'mbi', 'MBI17_g27204_MAGBIO' => 'mbi', 'MBI19_g21595_MAGBIO' => 'mbi', 'MD00G1148400' => 'mdo', 'MD02G1301200' => 'mdo', 'MD03G1227800' => 'mdo', 'MD05G1041100' => 'mdo', 'MD05G1124800' => 'mdo', 'MD05G1284000' => 'mdo', 'MD05G1338800' => 'mdo', 'MD05G1338900' => 'mdo', 'MD07G1022800' => 'mdo', 'MD10G1047500' => 'mdo', 'MD10G1127500' => 'mdo', 'MD10G1262300' => 'mdo', 'MD10G1293800' => 'mdo', 'MD16G1074300' => 'mdo', 'Medtr1g021670' => 'mtr', 'Medtr1g096320' => 'mtr', 'Medtr2g013690' => 'mtr', 'Medtr2g019450' => 'mtr', 'Medtr2g085170' => 'mtr', 'Medtr4g088785' => 'mtr', 'Medtr8g055930' => 'mtr', 'Medtr8g085850' => 'mtr', 'MELO3C002605.2' => 'cme', 'MELO3C003891.2' => 'cme', 'MELO3C004012.2' => 'cme', 'MELO3C007134.2' => 'cme', 'MELO3C008118.2' => 'cme', 'MELO3C016700.2' => 'cme', 'MELO3C024127.2' => 'cme', 'MELO3C033361.2' => 'cme', 'MELO3C033362.2' => 'cme', 'Migut.C00430' => 'egut', 'Migut.C01246' => 'egut', 'Migut.E00101' => 'egut', 'Migut.H01486' => 'egut', 'Migut.H01939' => 'egut', 'Migut.K00360' => 'egut', 'Migut.M00910' => 'egut', 'Migut.M01139' => 'egut', 'Migut.N02677' => 'egut', 'MSTRG.13252' => 'ama', 'MSTRG.14701' => 'ama', 'MSTRG.1521' => 'ama', 'MSTRG.15884' => 'ama', 'MSTRG.16242' => 'ama', 'MSTRG.22285' => 'ama', 'MSTRG.22444' => 'ama', 'MSTRG.2349' => 'ama', 'MSTRG.26308' => 'ama', 'MSTRG.28296' => 'ama', 'MSTRG.9895' => 'ama', 'Nitab4.5_0000110g0060' => 'nta', 'Nitab4.5_0000420g0130' => 'nta', 'Nitab4.5_0000422g0030' => 'nta', 'Nitab4.5_0000560g0180' => 'nta', 'Nitab4.5_0000703g0100' => 'nta', 'Nitab4.5_0000786g0200' => 'nta', 'Nitab4.5_0001336g0020' => 'nta', 'Nitab4.5_0001796g0030' => 'nta', 'Nitab4.5_0003348g0060' => 'nta', 'Nitab4.5_0003698g0040' => 'nta', 'Nitab4.5_0003942g0090' => 'nta', 'Nitab4.5_0004775g0070' => 'nta', 'Nitab4.5_0004864g0030' => 'nta', 'Nitab4.5_0005615g0020' => 'nta', 'Nitab4.5_0009288g0030' => 'nta', 'Nitab4.5_0009341g0010' => 'nta', 'Nitab4.5_0009535g0010' => 'nta', 'Nn1g03995' => 'nnu', 'Nn1g04100' => 'nnu', 'Nn1g06530' => 'nnu', 'Nn3g16404' => 'nnu', 'Nn3g17212' => 'nnu', 'Nn3g20776' => 'nnu', 'Nn3g21923' => 'nnu', 'Nn5g27737' => 'nnu', 'Nn5g29461' => 'nnu', 'Nn7g38355' => 'nnu', 'Nn8g39873' => 'nnu', 'Oeu000548.2' => 'oeu', 'Oeu004672.1' => 'oeu', 'Oeu015605.2' => 'oeu', 'Oeu016092.1' => 'oeu', 'Oeu017879.3' => 'oeu', 'Oeu024910.1' => 'oeu', 'Oeu028965.1' => 'oeu', 'Oeu031269.1' => 'oeu', 'Oeu031270.1' => 'oeu', 'Oeu032535.1' => 'oeu', 'Oeu034151.1' => 'oeu', 'Oeu034152.1' => 'oeu', 'Oeu034588.2' => 'oeu', 'Oeu050846.1' => 'oeu', 'Oeu050849.2' => 'oeu', 'Oeu051063.2' => 'oeu', 'Oeu052368.1' => 'oeu', 'Oeu052370.1' => 'oeu', 'Os01g0210400' => 'osa', 'Os01g0304300' => 'osa', 'Os01g0749100' => 'osa', 'Os02g0745800' => 'osa', 'Os03g0769050' => 'osa', 'Os05g0531500' => 'osa', 'Os06g0724300' => 'osa', 'Os11g0198100' => 'osa', 'Peaxi162Scf00069g01425' => 'pax', 'Peaxi162Scf00280g00811' => 'pax', 'Peaxi162Scf00310g00615' => 'pax', 'Peaxi162Scf00362g00542' => 'pax', 'Peaxi162Scf00461g00310' => 'pax', 'Peaxi162Scf00530g00118' => 'pax', 'Peaxi162Scf00541g00057' => 'pax', 'Peaxi162Scf00661g00017' => 'pax', 'Peaxi162Scf00926g00027' => 'pax', 'Peaxi162Scf01064g00263' => 'pax', 'Peaxi162Scf01211g00135' => 'pax', 'PGR004G2336' => 'pgr', 'PGR042G0327' => 'pgr', 'PGR042G1957' => 'pgr', 'PGR042G2003' => 'pgr', 'PGR042G3929' => 'pgr', 'PGR083G1137' => 'pgr', 'PGR083G1364' => 'pgr', 'PGSC0003DMG400003381' => 'stu', 'PGSC0003DMG400003417' => 'stu', 'PGSC0003DMG400008981' => 'stu', 'PGSC0003DMG400012417' => 'stu', 'PGSC0003DMG400012823' => 'stu', 'PGSC0003DMG400016885' => 'stu', 'PGSC0003DMG400022812' => 'stu', 'PGSC0003DMG400029726' => 'stu', 'PGSC0003DMG401009243' => 'stu', 'PGSC0003DMG401031505' => 'stu', 'PGSC0003DMG402031505' => 'stu', 'Phvul.001G017600' => 'pvu', 'Phvul.002G193500' => 'pvu', 'Phvul.002G228900' => 'pvu', 'Phvul.002G236800' => 'pvu', 'Phvul.003G049500' => 'pvu', 'Phvul.005G072000' => 'pvu', 'Phvul.006G164800' => 'pvu', 'Phvul.006G185100' => 'pvu', 'Phvul.007G090000' => 'pvu', 'Potri.001G399800' => 'ptr', 'Potri.002G149900' => 'ptr', 'Potri.004G044100' => 'ptr', 'Potri.004G177600' => 'ptr', 'Potri.009G138000' => 'ptr', 'Potri.010G094000' => 'ptr', 'Potri.011G053000' => 'ptr', 'Potri.011G119300' => 'ptr', 'Potri.013G113700' => 'ptr', 'Potri.018G107800' => 'ptr', 'Potri.019G084100' => 'ptr', 'Pp3c14_23720' => 'ppa', 'Pp3c16_6340' => 'ppa', 'Pp3c23_13420' => 'ppa', 'Pp3c24_2740' => 'ppa', 'Pp3c25_860' => 'ppa', 'Pp3c8_21750' => 'ppa', 'Prupe.1G273000' => 'ppe', 'Prupe.1G273700' => 'ppe', 'Prupe.1G274100' => 'ppe', 'Prupe.2G023300' => 'ppe', 'Prupe.4G048000' => 'ppe', 'Prupe.4G080400' => 'ppe', 'Prupe.4G181200' => 'ppe', 'Prupe.8G056900' => 'ppe', 'Prupe.8G168700' => 'ppe', 'Psat1g189080' => 'psa', 'Psat1g204760' => 'psa', 'Psat4g175560' => 'psa', 'Psat4g177720' => 'psa', 'Psat5g244240' => 'psa', 'Psat6g010720' => 'psa', 'Psat6g187200' => 'psa', 'Psat7g072040' => 'psa', 'PSO017G3501' => 'pso', 'PSO063G2148' => 'pso', 'PSO063G5608' => 'pso', 'PSO210G6392' => 'pso', 'PSO541G2319' => 'pso', 'PSO541G2836' => 'pso', 'PSO541G4012' => 'pso', 'PSO541G6253' => 'pso', 'PSO675G0580' => 'pso', 'PSO675G0856' => 'pso', 'PSO675G5635' => 'pso', 'PSO675G9157' => 'pso', 'PSO832G1660' => 'pso', 'PSO832G1969' => 'pso', 'QL02p007186' => 'qlo', 'QL02p033904' => 'qlo', 'QL03p064391' => 'qlo', 'QL05p040593' => 'qlo', 'QL05p058242' => 'qlo', 'QL08p021825' => 'qlo', 'QL11p004981' => 'qlo', 'RcHm_v2.0_Chr1g0318301' => 'rch', 'RcHm_v2.0_Chr4g0418501' => 'rch', 'RcHm_v2.0_Chr4g0439971' => 'rch', 'RcHm_v2.0_Chr5g0008541' => 'rch', 'RcHm_v2.0_Chr5g0014101' => 'rch', 'RcHm_v2.0_Chr5g0014131' => 'rch', 'RcHm_v2.0_Chr5g0033621' => 'rch', 'RcHm_v2.0_Chr6g0272041' => 'rch', 'RcHm_v2.0_Chr6g0278831' => 'rch', 'Rhsim02G0130400' => 'rsi', 'Rhsim02G0171100' => 'rsi', 'Rhsim05G0053000' => 'rsi', 'Rhsim05G0053100' => 'rsi', 'Rhsim06G0096500' => 'rsi', 'Rhsim06G0096600' => 'rsi', 'Rhsim06G0199100' => 'rsi', 'Rhsim12G0062300' => 'rsi', 'Rhsim12G0062800' => 'rsi', 'Sabra02G0118600' => 'sbr', 'Sabra04G0027300' => 'sbr', 'Sabra04G0119500' => 'sbr', 'Sabra08G0112500' => 'sbr', 'Sabra11G0036800' => 'sbr', 'Sabra11G0103800' => 'sbr', 'Sabra13G0096300' => 'sbr', 'Sabra16G0262300' => 'sbr', 'Sabra18G0091700' => 'sbr', 'Sabra19G0095400' => 'sbr', 'SalBow6G3080' => 'sbo', 'SalBow7G1157' => 'sbo', 'SalBow7G2123' => 'sbo', 'SalBow7G2285' => 'sbo', 'SalBow7G3537' => 'sbo', 'SalBow8G2947' => 'sbo', 'SalBow8G4463' => 'sbo', 'SalBow8G5466' => 'sbo', 'Sc01g0001750' => 'sci', 'Sc02g0006640' => 'sci', 'Sc02g0006670' => 'sci', 'Sc04g0008220' => 'sci', 'Sc05g0006190' => 'sci', 'Sc08g0002760' => 'sci', 'Sc17g0006170' => 'sci', 'Sc22g0002050' => 'sci', 'Sc23g0001190' => 'sci', 'Sc24g0000980' => 'sci', 'Sed0006245' => 'sed', 'Sed0007543' => 'sed', 'Sed0009411' => 'sed', 'Sed0010765' => 'sed', 'Sed0012944' => 'sed', 'Sed0014682' => 'sed', 'Sed0016174' => 'sed', 'Sed0016796' => 'sed', 'Sed0020317' => 'sed', 'Sed0021467' => 'sed', 'SEGI_01316' => 'sgi', 'SEGI_03374' => 'sgi', 'SEGI_16265' => 'sgi', 'SEGI_18569' => 'sgi', 'SEGI_20351' => 'sgi', 'SEGI_26395' => 'sgi', 'SEGI_29469' => 'sgi', 'SEGI_34771' => 'sgi', 'SEGI_36769' => 'sgi', 'SEGI_37139' => 'sgi', 'SGA_v2.0_scaffold100G29687' => 'sas', 'SGA_v2.0_scaffold118G32472' => 'sas', 'SGA_v2.0_scaffold14G07051' => 'sas', 'SGA_v2.0_scaffold183G39845' => 'sas', 'SGA_v2.0_scaffold1G00174' => 'sas', 'SGA_v2.0_scaffold22G09714' => 'sas', 'SGA_v2.0_scaffold333G48992' => 'sas', 'SGA_v2.0_scaffold46G17491' => 'sas', 'SGA_v2.0_scaffold49G18294' => 'sas', 'SGA_v2.0_scaffold63G21658' => 'sas', 'SHI01741' => 'shi', 'SHI05771' => 'shi', 'SHI18077' => 'shi', 'SHI20525' => 'shi', 'SHI20527' => 'shi', 'SHI20528' => 'shi', 'SMO172G0185' => 'smo', 'SMO198G0020' => 'smo', 'SMO351G0006' => 'smo', 'SMO356G0118' => 'smo', 'SMO358G0296' => 'smo', 'SMO367G0079' => 'smo', 'SMO367G1277' => 'smo', 'Solyc01g014220.3' => 'sly', 'Solyc01g111770.2' => 'sly', 'Solyc02g078180.3' => 'sly', 'Solyc03g006430.3' => 'sly', 'Solyc03g006456.1' => 'sly', 'Solyc03g079860.2' => 'sly', 'Solyc04g079770.3' => 'sly', 'Solyc05g007430.4' => 'sly', 'Solyc07g063150.3' => 'sly', 'Solyc08g016620.3' => 'sly', 'Solyc09g057590.3' => 'sly', 'Solyc09g057600.1' => 'sly', 'Solyc10g009050.3' => 'sly', 'Solyc11g017420.2' => 'sly', 'Sopen01g053810' => 'spe', 'Sopen02g023040' => 'spe', 'Sopen03g002440' => 'spe', 'Sopen04g033350' => 'spe', 'Sopen05g003310' => 'spe', 'Sopen07g004050' => 'spe', 'Sopen07g031340' => 'spe', 'Sopen08g006990' => 'spe', 'Sopen10g004830' => 'spe', 'Sopen11g009370' => 'spe', 'Sp1g24450' => 'spa', 'Sp1g29670' => 'spa', 'Sp1g39600' => 'spa', 'Sp2g11080' => 'spa', 'Sp2g13970' => 'spa', 'Sp4g16130' => 'spa', 'Sp6g13080' => 'spa', 'Sp7g37270' => 'spa', 'TAR371G0065' => 'tar', 'TAR376G0340' => 'tar', 'TAR376G0435' => 'tar', 'TAR381G0002' => 'tar', 'TAR381G1236' => 'tar', 'TAR624G0055' => 'tar', 'TAR624G0324' => 'tar', 'TAR624G0696' => 'tar', 'TAR624G0906' => 'tar', 'TAR625G0107' => 'tar', 'TAR626G0015' => 'tar', 'TAR626G1356' => 'tar', 'TAR627G0888' => 'tar', 'TAR628G0399' => 'tar', 'TAR628G1327' => 'tar', 'TAR629G2831' => 'tar', 'TAR629G2874' => 'tar', 'TAR633G1432' => 'tar', 'TAR633G2771' => 'tar', 'THA.LOC104803394' => 'tha', 'THA.LOC104805153' => 'tha', 'THA.LOC104806784' => 'tha', 'THA.LOC104810473' => 'tha', 'THA.LOC104813100' => 'tha', 'THA.LOC104814215' => 'tha', 'THA.LOC104815554' => 'tha', 'THA.LOC104820544' => 'tha', 'THA.LOC104824754' => 'tha', 'THA.LOC104827717' => 'tha', 'Thecc.02G031400' => 'tca', 'Thecc.02G055900' => 'tca', 'Thecc.02G350800' => 'tca', 'Thecc.06G150900' => 'tca', 'Thecc.06G186600' => 'tca', 'Thecc.07G089600' => 'tca', 'Thecc.08G020400' => 'tca', 'Thecc.08G182100' => 'tca', 'Thhalv10000873m.g' => 'esa', 'Thhalv10004185m.g' => 'esa', 'Thhalv10006981m.g' => 'esa', 'Thhalv10007204m.g' => 'esa', 'Thhalv10011374m.g' => 'esa', 'Thhalv10013482m.g' => 'esa', 'Thhalv10017801m.g' => 'esa', 'Thhalv10024983m.g' => 'esa', 'TPR.G12072' => 'tpr', 'TPR.G15769' => 'tpr', 'TPR.G16504' => 'tpr', 'TPR.G16506' => 'tpr', 'TPR.G24345' => 'tpr', 'TPR.G26666' => 'tpr', 'TPR.G27320' => 'tpr', 'TPR.G31819' => 'tpr', 'TPR.G38879' => 'tpr', 'TPR.G39015' => 'tpr', 'TPR.G8819' => 'tpr', 'TWI09G0924' => 'twi', 'TWI12G0811' => 'twi', 'TWI12G1294' => 'twi', 'TWI31G0150' => 'twi', 'TWI36G1262' => 'twi', 'TWI38G1287' => 'twi', 'TWI38G1633' => 'twi', 'TWI38G1982' => 'twi', 'TWI39G0116' => 'twi', 'TWI60G1011' => 'twi', 'TWI63G0171' => 'twi', 'TWI73G0839' => 'twi', 'TWI79G1511' => 'twi', 'unitig_0.g915' => 'ugi', 'unitig_0.g916' => 'ugi', 'unitig_21.g20219' => 'ugi', 'unitig_21.g20416' => 'ugi', 'unitig_578.g16132' => 'ugi', 'unitig_578.g16718' => 'ugi', 'unitig_62.g23481' => 'ugi', 'unitig_744.g24535' => 'ugi', 'unitig_749.g13525' => 'ugi', 'vmacro01248' => 'vma', 'vmacro02290' => 'vma', 'vmacro10946' => 'vma', 'vmacro11865' => 'vma', 'vmacro12493' => 'vma', 'vmacro17322' => 'vma', 'vmacro21599' => 'vma', 'vmacro23041' => 'vma', 'VMungo0251G0004' => 'vmu', 'VMungo0251G2639' => 'vmu', 'VMungo0251G2967' => 'vmu', 'VMungo0540G0864' => 'vmu', 'VMungo0540G1569' => 'vmu', 'VMungo0647G0317' => 'vmu', 'VMungo0720G1373' => 'vmu', 'VMungo0720G1508' => 'vmu', 'VMungo1080G0485' => 'vmu', 'VMungo1215G3177' => 'vmu', 'Zm00001eb112600' => 'zma', 'Zm00001eb120220' => 'zma', 'Zm00001eb153240' => 'zma', 'Zm00001eb168880' => 'zma', 'Zm00001eb213920' => 'zma', 'Zm00001eb228280' => 'zma', 'Zm00001eb254580' => 'zma', 'Zm00001eb272180' => 'zma', 'Zm00001eb293190' => 'zma', 'Zm00001eb322930' => 'zma', 'Zm00001eb353360' => 'zma', 'Zm00001eb353390' => 'zma', 'Zm00001eb353430' => 'zma', 'Zm00001eb353440' => 'zma', 'Zm00001eb353780' => 'zma' ), 'gf_id' => 'HOM05D000499', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000499' ), 'data_identifier' => 'HOM05D000499', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000499', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1066', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p29780' => 'bna', 'A02p33180' => 'bna', 'A03p16470' => 'bna', 'A03p66010' => 'bna', 'A04p25970' => 'bna', 'A06p01270' => 'bna', 'A06p46080' => 'bna', 'A07p11400' => 'bna', 'A08p01840' => 'bna', 'A08p08230' => 'bna', 'A08p25740' => 'bna', 'A09p32070' => 'bna', 'A09p37830' => 'bna', 'A09p42840' => 'bna', 'A09p42850' => 'bna', 'Aa31LG10G2060' => 'aar', 'Aa31LG2G7410' => 'aar', 'Aa31LG6G10200' => 'aar', 'Aa31LG6G16680' => 'aar', 'Aa31LG6G8470' => 'aar', 'Aa31LG9G12730' => 'aar', 'Aa31LG9G13680' => 'aar', 'Aa31LG9G14920' => 'aar', 'Aa31LG9G6650' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4977' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5467' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3254' => 'aag', 'Actinidia02578' => 'ach', 'Actinidia07693' => 'ach', 'Actinidia08413' => 'ach', 'Actinidia08414' => 'ach', 'Actinidia15289' => 'ach', 'Actinidia19871' => 'ach', 'Actinidia21475' => 'ach', 'Actinidia22576' => 'ach', 'Actinidia28327' => 'ach', 'Actinidia32491' => 'ach', 'Actinidia39463' => 'ach', 'Actinidia39571' => 'ach', 'Ah.01g013750' => 'amhyb', 'Ah.01g023210' => 'amhyb', 'Ah.04g164850' => 'amhyb', 'Ah.05g178060' => 'amhyb', 'Ah.07g204270' => 'amhyb', 'Ah.07g208480' => 'amhyb', 'Ah.09g237410' => 'amhyb', 'Ah.14g089460' => 'amhyb', 'AL1G41790' => 'aly', 'AL1G49050' => 'aly', 'AL1G53810' => 'aly', 'AL1G61400' => 'aly', 'AL4G18580' => 'aly', 'AL5G12510' => 'aly', 'AL5G12540' => 'aly', 'AL6G43230' => 'aly', 'AL7G10370' => 'aly', 'AL7G19250' => 'aly', 'AL8G12240' => 'aly', 'AL8G18540' => 'aly', 'Aqoxy1G02409' => 'aox', 'Aqoxy2G03993' => 'aox', 'Aqoxy3G03357' => 'aox', 'Aqoxy4G00785' => 'aox', 'Aqoxy5G02598' => 'aox', 'Aqoxy6G00132' => 'aox', 'Aqoxy7G01776' => 'aox', 'Aqoxy7G02316' => 'aox', 'Aqoxy7G03973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.12AFKW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B8730' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27IQR1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3F75VG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3RE0GA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41TCQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.527VTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FIR39' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5W8UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DA38EV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ63HS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H1I32C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HC27T5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4M8AP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7N3CZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9UVDZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LS1NQA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT1D4B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SKC4TM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCFV76' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF9Q1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQWD9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1ZM88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WE07RT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YCK7VH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJE6Q6' => 'arhy', 'AT1G28240' => 'ath', 'AT1G34550' => 'ath', 'AT1G53040' => 'ath', 'AT2G02910' => 'ath', 'AT4G09630' => 'ath', 'AT4G38500' => 'ath', 'AT5G42660' => 'ath', 'AT5G46220' => 'ath', 'ATR0152G026' => 'atr', 'ATR0564G343' => 'atr', 'ATR0706G151' => 'atr', 'ATR0733G207' => 'atr', 'ATR0751G234' => 'atr', 'ATR0807G048' => 'atr', 'ATR1091G084' => 'atr', 'Atru.chr10.1229' => 'acertr', 'Atru.chr10.1230' => 'acertr', 'Atru.chr10.1874' => 'acertr', 'Atru.chr11.1808' => 'acertr', 'Atru.chr13.1795' => 'acertr', 'Atru.chr13.570' => 'acertr', 'Atru.chr2.2608' => 'acertr', 'Atru.chr2.2609' => 'acertr', 'Atru.chr5.3428' => 'acertr', 'Atru.chr8.1171' => 'acertr', 'AUR62004651' => 'cqu', 'AUR62008675' => 'cqu', 'AUR62010014' => 'cqu', 'AUR62013004' => 'cqu', 'AUR62014825' => 'cqu', 'AUR62015015' => 'cqu', 'AUR62015151' => 'cqu', 'AUR62017020' => 'cqu', 'AUR62019422' => 'cqu', 'AUR62023570' => 'cqu', 'AUR62025571' => 'cqu', 'AUR62029098' => 'cqu', 'AUR62033863' => 'cqu', 'AUR62034296' => 'cqu', 'AUR62040075' => 'cqu', 'BcaB02g07334' => 'bca', 'BcaB02g10575' => 'bca', 'BcaB03g12119' => 'bca', 'BcaB03g12120' => 'bca', 'BcaB03g13945' => 'bca', 'BcaB04g17123' => 'bca', 'BcaB04g17867' => 'bca', 'BcaB04g19839' => 'bca', 'BcaB07g30317' => 'bca', 'BcaB07g32432' => 'bca', 'BcaB07g33362' => 'bca', 'BcaB08g36611' => 'bca', 'BcaC01g00028' => 'bca', 'BcaC01g01356' => 'bca', 'BcaC01g02034' => 'bca', 'BcaC01g06051' => 'bca', 'BcaC03g16839' => 'bca', 'BcaC03g17176' => 'bca', 'BcaC05g26829' => 'bca', 'BcaC06g31490' => 'bca', 'BcaC06g35344' => 'bca', 'BcaC06g36570' => 'bca', 'BcaC07g37537' => 'bca', 'BcaC08g43491' => 'bca', 'BcaC08g43773' => 'bca', 'BcaNung00234' => 'bca', 'BcaNung01982' => 'bca', 'BcaNung03707' => 'bca', 'BcaNung06454' => 'bca', 'BolC2t10762H' => 'bol', 'BolC2t11191H' => 'bol', 'BolC3t14322H' => 'bol', 'BolC3t19747H' => 'bol', 'BolC3t21425H' => 'bol', 'BolC4t27800H' => 'bol', 'BolC5t31423H' => 'bol', 'BolC6t35951H' => 'bol', 'BolC6t36282H' => 'bol', 'BolC7t40678H' => 'bol', 'BolC7t40679H' => 'bol', 'BolC7t42222H' => 'bol', 'BolC7t43492H' => 'bol', 'BolC7t46785H' => 'bol', 'BolC8t47853H' => 'bol', 'BolC9t56805H' => 'bol', 'BraA02t08000Z' => 'bra', 'BraA02t08341Z' => 'bra', 'BraA03t10936Z' => 'bra', 'BraA03t15657Z' => 'bra', 'BraA04t18100Z' => 'bra', 'BraA05t20523Z' => 'bra', 'BraA06t23353Z' => 'bra', 'BraA06t27473Z' => 'bra', 'BraA06t27769Z' => 'bra', 'BraA07t28928Z' => 'bra', 'BraA08t32236Z' => 'bra', 'BraA08t32841Z' => 'bra', 'BraA08t34524Z' => 'bra', 'BraA09t38742Z' => 'bra', 'BraA09t39295Z' => 'bra', 'C02p47180' => 'bna', 'C02p50990' => 'bna', 'C03p19360' => 'bna', 'C03p74950' => 'bna', 'C03p91000' => 'bna', 'C04p63260' => 'bna', 'C05p27050' => 'bna', 'C06p08750' => 'bna', 'C06p11490' => 'bna', 'C07p02820' => 'bna', 'C07p17180' => 'bna', 'C07p29440' => 'bna', 'C07p63730' => 'bna', 'C09p39260' => 'bna', 'CAN.G1164.34' => 'can', 'CAN.G1164.39' => 'can', 'CAN.G1530.3' => 'can', 'CAN.G162.61' => 'can', 'CAN.G176.6' => 'can', 'CAN.G289.49' => 'can', 'CAN.G370.21' => 'can', 'CAN.G370.22' => 'can', 'CAN.G371.117' => 'can', 'CAN.G58.37' => 'can', 'CAN.G588.98' => 'can', 'CANSAT21G2266' => 'cansat', 'CANSAT25G2799' => 'cansat', 'CANSAT35G0862' => 'cansat', 'CANSAT35G1704' => 'cansat', 'CANSAT35G1760' => 'cansat', 'CANSAT56G3971' => 'cansat', 'CANSAT56G4116' => 'cansat', 'CANSAT80G1259' => 'cansat', 'CARHR027730' => 'chi', 'CARHR033880' => 'chi', 'CARHR043270' => 'chi', 'CARHR145330' => 'chi', 'CARHR145340' => 'chi', 'CARHR175570' => 'chi', 'CARHR181570' => 'chi', 'CARHR258470' => 'chi', 'CARHR260490' => 'chi', 'CARHR294220' => 'chi', 'Carub.0001s2668' => 'cru', 'Carub.0001s3257' => 'cru', 'Carub.0001s4220' => 'cru', 'Carub.0005s0179' => 'cru', 'Carub.0006s2807' => 'cru', 'Carub.0007s0039' => 'cru', 'Carub.0008s0169' => 'cru', 'Carub.0008s0636' => 'cru', 'Ca_00338_v3' => 'car', 'Ca_00542_v3' => 'car', 'Ca_01844_v3' => 'car', 'Ca_10611_v3' => 'car', 'Ca_13326_v3' => 'car', 'Ca_17944_v3' => 'car', 'Ca_18546_v3' => 'car', 'Ca_24219_v3' => 'car', 'Ca_29972_v3' => 'car', 'CBR_g3681' => 'cbr', 'CBR_g40021' => 'cbr', 'Cc01_g08140' => 'ccan', 'Cc02_g13410' => 'ccan', 'Cc02_g37480' => 'ccan', 'Cc05_g12030' => 'ccan', 'Cc09_g03370' => 'ccan', 'Cc09_g10300' => 'ccan', 'Cc10_g03530' => 'ccan', 'Cc10_g11380' => 'ccan', 'CDE01G0176' => 'cde', 'CDE02G0675' => 'cde', 'CDE02G0942' => 'cde', 'CDE02G1153' => 'cde', 'CDE02G4177' => 'cde', 'CDE04G2117' => 'cde', 'CDE04G2736' => 'cde', 'CDE08G1161' => 'cde', 'CDE09G1238' => 'cde', 'Cfa000467' => 'cfa', 'Cfa000947' => 'cfa', 'Cfa004969' => 'cfa', 'Cfa005284' => 'cfa', 'Cfa008993' => 'cfa', 'Cfa018187' => 'cfa', 'Cfa018454' => 'cfa', 'Cfa020585' => 'cfa', 'Ciclev10000424m.g' => 'ccl', 'Ciclev10003605m.g' => 'ccl', 'Ciclev10007828m.g' => 'ccl', 'Ciclev10014620m.g' => 'ccl', 'Ciclev10015169m.g' => 'ccl', 'Ciclev10018291m.g' => 'ccl', 'Ciclev10028256m.g' => 'ccl', 'Ciclev10033822m.g' => 'ccl', 'CiPaw.05G060300' => 'cil', 'CiPaw.05G085000' => 'cil', 'CiPaw.06G083700' => 'cil', 'CiPaw.06G120300' => 'cil', 'CiPaw.09G060500' => 'cil', 'CiPaw.09G123800' => 'cil', 'CiPaw.11G169700' => 'cil', 'CiPaw.12G118300' => 'cil', 'CiPaw.15G071000' => 'cil', 'CiPaw.15G081900' => 'cil', 'ClCG01G024610' => 'cla', 'ClCG03G006070' => 'cla', 'ClCG05G019250' => 'cla', 'ClCG09G009500' => 'cla', 'ClCG11G008200' => 'cla', 'ClCG11G018080' => 'cla', 'COL.COLO4_17373' => 'col', 'COL.COLO4_22994' => 'col', 'COL.COLO4_26389' => 'col', 'COL.COLO4_27170' => 'col', 'COL.COLO4_31074' => 'col', 'COL.COLO4_31465' => 'col', 'COL.COLO4_36438' => 'col', 'COL.COLO4_36439' => 'col', 'Cpa.g.c38781' => 'cpa', 'Cpa.g.sc128.12' => 'cpa', 'Cpa.g.sc166.7' => 'cpa', 'Cpa.g.sc166.8' => 'cpa', 'Cpa.g.sc20.111' => 'cpa', 'Cpa.g.sc27.31' => 'cpa', 'Cpa.g.sc64.36' => 'cpa', 'Cpa.g.sc64.37' => 'cpa', 'Cpa.g.sc66.49' => 'cpa', 'Cpa.g.sc80.64' => 'cpa', 'CsaV3_1G012320' => 'csa', 'CsaV3_2G008480' => 'csa', 'CsaV3_2G033450' => 'csa', 'CsaV3_3G044830' => 'csa', 'CsaV3_4G033710' => 'csa', 'CsaV3_6G051730' => 'csa', 'CsaV3_7G025350' => 'csa', 'CSS0001067' => 'camsi', 'CSS0005996' => 'camsi', 'CSS0006590' => 'camsi', 'CSS0009673' => 'camsi', 'CSS0010201' => 'camsi', 'CSS0010549' => 'camsi', 'CSS0011364' => 'camsi', 'CSS0014473' => 'camsi', 'CSS0014961' => 'camsi', 'CSS0020191' => 'camsi', 'CSS0021165' => 'camsi', 'CSS0022306' => 'camsi', 'CSS0030591' => 'camsi', 'CSS0030696' => 'camsi', 'CSS0032653' => 'camsi', 'CSS0037487' => 'camsi', 'CSS0041102' => 'camsi', 'CSS0041261' => 'camsi', 'CSS0046246' => 'camsi', 'CSS0049256' => 'camsi', 'DCAR_004075' => 'dca', 'DCAR_011538' => 'dca', 'DCAR_019553' => 'dca', 'DCAR_020952' => 'dca', 'DCAR_021739' => 'dca', 'DCAR_027407' => 'dca', 'DCAR_027913' => 'dca', 'DCAR_028066' => 'dca', 'Dinv05899' => 'din', 'Dinv07563' => 'din', 'Dinv08010' => 'din', 'Dinv14125' => 'din', 'Dinv20172' => 'din', 'Dinv30743' => 'din', 'Dinv31229' => 'din', 'Dinv34162' => 'din', 'Dinv36028' => 'din', 'Dinv39368' => 'din', 'Dinv40565' => 'din', 'Dinv41706' => 'din', 'Duzib052G0089' => 'dzi', 'Duzib116G0641' => 'dzi', 'Duzib132G0069' => 'dzi', 'Duzib132G1219' => 'dzi', 'Duzib147G0278' => 'dzi', 'Duzib160G0480' => 'dzi', 'Duzib170G0661' => 'dzi', 'Duzib177G0591' => 'dzi', 'Duzib187G1353' => 'dzi', 'Duzib192G0858' => 'dzi', 'Duzib192G0883' => 'dzi', 'Duzib213G0506' => 'dzi', 'Duzib235G0289' => 'dzi', 'Duzib251G0422' => 'dzi', 'ECA232G3898' => 'eca', 'ECA233G5950' => 'eca', 'ECA234G1699' => 'eca', 'ECA234G2421' => 'eca', 'ECA236G0426' => 'eca', 'ECA236G4331' => 'eca', 'ECA248G2573' => 'eca', 'EL10Ac1g00077' => 'bvu', 'EL10Ac1g01746' => 'bvu', 'EL10Ac2g03464' => 'bvu', 'EL10Ac4g08176' => 'bvu', 'EL10Ac7g17521' => 'bvu', 'EL10Ac8g20386' => 'bvu', 'EL10Ac9g21343' => 'bvu', 'EL10Ac9g22688' => 'bvu', 'Eucgr.B03434' => 'egr', 'Eucgr.D00618' => 'egr', 'Eucgr.E02395' => 'egr', 'Eucgr.F01129' => 'egr', 'Eucgr.F02622' => 'egr', 'Eucgr.F04207' => 'egr', 'FAN01G0570' => 'fan', 'FAN03G3351' => 'fan', 'FAN06G3702' => 'fan', 'FAN07G2149' => 'fan', 'FAN10G3758' => 'fan', 'FAN11G1170' => 'fan', 'FAN11G2050' => 'fan', 'FAN11G2724' => 'fan', 'FAN12G1700' => 'fan', 'FAN12G2028' => 'fan', 'FAN15G1160' => 'fan', 'FAN15G3063' => 'fan', 'FAN16G2540' => 'fan', 'FAN16G3077' => 'fan', 'FAN16G3624' => 'fan', 'FAN17G0221' => 'fan', 'FAN20G2492' => 'fan', 'FAN20G2905' => 'fan', 'FAN21G0548' => 'fan', 'FAN21G1300' => 'fan', 'FAN22G0077' => 'fan', 'FAN22G1315' => 'fan', 'FAN24G1280' => 'fan', 'FAN24G1445' => 'fan', 'FAN24G3527' => 'fan', 'FAN25G0464' => 'fan', 'FAN25G2885' => 'fan', 'FAN25G3270' => 'fan', 'FAN27G1101' => 'fan', 'FAN27G2846' => 'fan', 'FAN27G3524' => 'fan', 'FvH4_2g11770' => 'fve', 'FvH4_2g15630' => 'fve', 'FvH4_3g05570' => 'fve', 'FvH4_3g09110' => 'fve', 'FvH4_3g19940' => 'fve', 'FvH4_4g04821' => 'fve', 'FvH4_4g31480' => 'fve', 'FvH4_7g01740' => 'fve', 'Glyma.05G130400' => 'gma', 'Glyma.05G156400' => 'gma', 'Glyma.07G197000' => 'gma', 'Glyma.08G085151' => 'gma', 'Glyma.08G114500' => 'gma', 'Glyma.08G300400' => 'gma', 'Glyma.10G215800' => 'gma', 'Glyma.12G224400' => 'gma', 'Glyma.13G179300' => 'gma', 'Glyma.13G218151' => 'gma', 'Glyma.13G238800' => 'gma', 'Glyma.13G276900' => 'gma', 'Glyma.14G078200' => 'gma', 'Glyma.15G074500' => 'gma', 'Glyma.15G094100' => 'gma', 'Glyma.17G247200' => 'gma', 'Glyma.18G120100' => 'gma', 'Glyma.20G176000' => 'gma', 'Gohir.A01G063600' => 'ghi', 'Gohir.A01G170301' => 'ghi', 'Gohir.A02G060500' => 'ghi', 'Gohir.A05G133850' => 'ghi', 'Gohir.A05G161400' => 'ghi', 'Gohir.A06G012900' => 'ghi', 'Gohir.A06G035901' => 'ghi', 'Gohir.A06G127100' => 'ghi', 'Gohir.A06G210500' => 'ghi', 'Gohir.A08G008650' => 'ghi', 'Gohir.A09G072700' => 'ghi', 'Gohir.A09G088301' => 'ghi', 'Gohir.A10G040600' => 'ghi', 'Gohir.A12G036300' => 'ghi', 'Gohir.A12G143350' => 'ghi', 'Gohir.A12G165500' => 'ghi', 'Gohir.A13G145700' => 'ghi', 'Gohir.D01G050000' => 'ghi', 'Gohir.D01G051366' => 'ghi', 'Gohir.D01G161350' => 'ghi', 'Gohir.D02G065900' => 'ghi', 'Gohir.D05G164200' => 'ghi', 'Gohir.D05G355500' => 'ghi', 'Gohir.D06G010400' => 'ghi', 'Gohir.D06G111250' => 'ghi', 'Gohir.D06G132000' => 'ghi', 'Gohir.D06G210500' => 'ghi', 'Gohir.D07G165675' => 'ghi', 'Gohir.D08G062240' => 'ghi', 'Gohir.D08G086101' => 'ghi', 'Gohir.D08G138060' => 'ghi', 'Gohir.D09G072300' => 'ghi', 'Gohir.D10G041400' => 'ghi', 'Gohir.D11G191020' => 'ghi', 'Gohir.D11G212066' => 'ghi', 'Gohir.D12G036300' => 'ghi', 'Gohir.D12G168600' => 'ghi', 'Gohir.D13G150600' => 'ghi', 'Gorai.001G057300' => 'gra', 'Gorai.002G069900' => 'gra', 'Gorai.002G200000' => 'gra', 'Gorai.003G067600' => 'gra', 'Gorai.005G074800' => 'gra', 'Gorai.006G087300' => 'gra', 'Gorai.008G037500' => 'gra', 'Gorai.008G181400' => 'gra', 'Gorai.009G169400' => 'gra', 'Gorai.009G387900' => 'gra', 'Gorai.010G013300' => 'gra', 'Gorai.010G153800' => 'gra', 'Gorai.010G255800' => 'gra', 'Gorai.011G043700' => 'gra', 'Gorai.011G198900' => 'gra', 'Gorai.013G168400' => 'gra', 'GSVIVG01005212001' => 'vvi', 'GSVIVG01006163001' => 'vvi', 'GSVIVG01009625001' => 'vvi', 'GSVIVG01014338001' => 'vvi', 'GSVIVG01020005001' => 'vvi', 'GSVIVG01021450001' => 'vvi', 'GSVIVG01023975001' => 'vvi', 'GSVIVG01034490001' => 'vvi', 'HanXRQChr04g0112071' => 'han', 'HanXRQChr05g0131151' => 'han', 'HanXRQChr09g0262371' => 'han', 'HanXRQChr09g0268401' => 'han', 'HanXRQChr10g0279241' => 'han', 'HanXRQChr10g0297961' => 'han', 'HanXRQChr11g0326231' => 'han', 'HanXRQChr11g0328471' => 'han', 'HanXRQChr16g0507941' => 'han', 'HanXRQChr17g0560211' => 'han', 'Haze_02108' => 'cav', 'Haze_02428' => 'cav', 'Haze_05593' => 'cav', 'Haze_06448' => 'cav', 'Haze_09427' => 'cav', 'Haze_12022' => 'cav', 'Haze_17612' => 'cav', 'Haze_17928' => 'cav', 'Hma1.2p1_0032F.1_g019250' => 'hma', 'Hma1.2p1_0163F.1_g072690' => 'hma', 'Hma1.2p1_0265F.1_g106710' => 'hma', 'Hma1.2p1_0286F.1_g113970' => 'hma', 'Hma1.2p1_0363F.1_g136640' => 'hma', 'Hma1.2p1_0584F.1_g183470' => 'hma', 'Hma1.2p1_0885F.1_g232570' => 'hma', 'HPP92_006022' => 'vpl', 'HPP92_007320' => 'vpl', 'HPP92_011521' => 'vpl', 'HPP92_019387' => 'vpl', 'HPP92_024038' => 'vpl', 'Hund05891' => 'sun', 'Hund06450' => 'sun', 'Hund12053' => 'sun', 'Hund16800' => 'sun', 'Hund21222' => 'sun', 'Hund22896' => 'sun', 'Hund23746' => 'sun', 'Hund27083' => 'sun', 'Lalb_Chr02g0141831' => 'lal', 'Lalb_Chr02g0141841' => 'lal', 'Lalb_Chr05g0220411' => 'lal', 'Lalb_Chr06g0162081' => 'lal', 'Lalb_Chr09g0327651' => 'lal', 'Lalb_Chr13g0295051' => 'lal', 'Lalb_Chr15g0086801' => 'lal', 'Lalb_Chr16g0383781' => 'lal', 'Lalb_Chr16g0383791' => 'lal', 'Lalb_Chr18g0055441' => 'lal', 'Lalb_Chr18g0059611' => 'lal', 'Lalb_Chr20g0109661' => 'lal', 'Lalb_Chr20g0109831' => 'lal', 'Lalb_Chr20g0121871' => 'lal', 'Lalb_Chr22g0355361' => 'lal', 'Lalb_Chr25g0286371' => 'lal', 'Lj1A1187G43' => 'lonja', 'Lj1A1205T50' => 'lonja', 'Lj1A800G33' => 'lonja', 'Lj1C1187T7' => 'lonja', 'Lj1C843T11' => 'lonja', 'Lj1g0010940' => 'lja', 'Lj2A288T69' => 'lonja', 'Lj3g0024276' => 'lja', 'Lj4A47T76' => 'lonja', 'Lj4g0005805' => 'lja', 'Lj4g0006097' => 'lja', 'Lj4g0008528' => 'lja', 'Lj4g0024907' => 'lja', 'Lj5g0012472' => 'lja', 'Lj5g0018648' => 'lja', 'Lj6C789G1' => 'lonja', 'Lj6g0004000' => 'lja', 'Lj7A292G67' => 'lonja', 'Lj7A292T64' => 'lonja', 'Lj9A400T58' => 'lonja', 'Lsat_1_v5_gn_1_126181' => 'lsa', 'Lsat_1_v5_gn_4_123041' => 'lsa', 'Lsat_1_v5_gn_4_133620' => 'lsa', 'Lsat_1_v5_gn_4_53221' => 'lsa', 'Lsat_1_v5_gn_4_71961' => 'lsa', 'Lsat_1_v5_gn_7_105241' => 'lsa', 'Lsat_1_v5_gn_7_21361' => 'lsa', 'Lsat_1_v5_gn_7_28860' => 'lsa', 'Lsat_1_v5_gn_7_31260' => 'lsa', 'Lsat_1_v5_gn_8_52801' => 'lsa', 'Manes.02G191400' => 'mes', 'Manes.03G110100' => 'mes', 'Manes.04G071100' => 'mes', 'Manes.05G100500' => 'mes', 'Manes.05G164700' => 'mes', 'Manes.15G087000' => 'mes', 'Manes.15G121500' => 'mes', 'Manes.16G028300' => 'mes', 'Manes.17G046100' => 'mes', 'Manes.17G069800' => 'mes', 'Manes.18G100500' => 'mes', 'Mapoly0002s0109' => 'mpo', 'Mapoly0024s0007' => 'mpo', 'Mapoly0089s0032' => 'mpo', 'MBI04_g42241_MAGBIO' => 'mbi', 'MBI05_g11988_MAGBIO' => 'mbi', 'MBI05_g35452_MAGBIO' => 'mbi', 'MBI07_g30179_MAGBIO' => 'mbi', 'MBI07_g35859_MAGBIO' => 'mbi', 'MBI07_g35860_MAGBIO' => 'mbi', 'MBI07_g37166_MAGBIO' => 'mbi', 'MBI08_g18172_MAGBIO' => 'mbi', 'MBI09_g08441_MAGBIO' => 'mbi', 'MBI13_g01676_MAGBIO' => 'mbi', 'MBI14_g42955_MAGBIO' => 'mbi', 'MBI16_g13161_MAGBIO' => 'mbi', 'MBI17_g27204_MAGBIO' => 'mbi', 'MBI19_g21595_MAGBIO' => 'mbi', 'MD00G1148400' => 'mdo', 'MD02G1301200' => 'mdo', 'MD03G1227800' => 'mdo', 'MD05G1041100' => 'mdo', 'MD05G1124800' => 'mdo', 'MD05G1284000' => 'mdo', 'MD05G1338800' => 'mdo', 'MD05G1338900' => 'mdo', 'MD07G1022800' => 'mdo', 'MD10G1047500' => 'mdo', 'MD10G1127500' => 'mdo', 'MD10G1262300' => 'mdo', 'MD10G1293800' => 'mdo', 'MD16G1074300' => 'mdo', 'Medtr1g021670' => 'mtr', 'Medtr1g096320' => 'mtr', 'Medtr2g013690' => 'mtr', 'Medtr2g019450' => 'mtr', 'Medtr2g085170' => 'mtr', 'Medtr4g088785' => 'mtr', 'Medtr8g055930' => 'mtr', 'Medtr8g085850' => 'mtr', 'MELO3C002605.2' => 'cme', 'MELO3C003891.2' => 'cme', 'MELO3C004012.2' => 'cme', 'MELO3C007134.2' => 'cme', 'MELO3C008118.2' => 'cme', 'MELO3C016700.2' => 'cme', 'MELO3C024127.2' => 'cme', 'MELO3C033361.2' => 'cme', 'MELO3C033362.2' => 'cme', 'Migut.C00430' => 'egut', 'Migut.C01246' => 'egut', 'Migut.E00101' => 'egut', 'Migut.H01486' => 'egut', 'Migut.H01939' => 'egut', 'Migut.K00360' => 'egut', 'Migut.M00910' => 'egut', 'Migut.M01139' => 'egut', 'Migut.N02677' => 'egut', 'MSTRG.13252' => 'ama', 'MSTRG.14701' => 'ama', 'MSTRG.1521' => 'ama', 'MSTRG.15884' => 'ama', 'MSTRG.16242' => 'ama', 'MSTRG.22285' => 'ama', 'MSTRG.22444' => 'ama', 'MSTRG.2349' => 'ama', 'MSTRG.26308' => 'ama', 'MSTRG.28296' => 'ama', 'MSTRG.9895' => 'ama', 'Nitab4.5_0000110g0060' => 'nta', 'Nitab4.5_0000420g0130' => 'nta', 'Nitab4.5_0000422g0030' => 'nta', 'Nitab4.5_0000560g0180' => 'nta', 'Nitab4.5_0000703g0100' => 'nta', 'Nitab4.5_0000786g0200' => 'nta', 'Nitab4.5_0001336g0020' => 'nta', 'Nitab4.5_0001796g0030' => 'nta', 'Nitab4.5_0003348g0060' => 'nta', 'Nitab4.5_0003698g0040' => 'nta', 'Nitab4.5_0003942g0090' => 'nta', 'Nitab4.5_0004775g0070' => 'nta', 'Nitab4.5_0004864g0030' => 'nta', 'Nitab4.5_0005615g0020' => 'nta', 'Nitab4.5_0009288g0030' => 'nta', 'Nitab4.5_0009341g0010' => 'nta', 'Nitab4.5_0009535g0010' => 'nta', 'Nn1g03995' => 'nnu', 'Nn1g04100' => 'nnu', 'Nn1g06530' => 'nnu', 'Nn3g16404' => 'nnu', 'Nn3g17212' => 'nnu', 'Nn3g20776' => 'nnu', 'Nn3g21923' => 'nnu', 'Nn5g27737' => 'nnu', 'Nn5g29461' => 'nnu', 'Nn7g38355' => 'nnu', 'Nn8g39873' => 'nnu', 'Oeu000548.2' => 'oeu', 'Oeu004672.1' => 'oeu', 'Oeu015605.2' => 'oeu', 'Oeu016092.1' => 'oeu', 'Oeu017879.3' => 'oeu', 'Oeu024910.1' => 'oeu', 'Oeu028965.1' => 'oeu', 'Oeu031269.1' => 'oeu', 'Oeu031270.1' => 'oeu', 'Oeu032535.1' => 'oeu', 'Oeu034151.1' => 'oeu', 'Oeu034152.1' => 'oeu', 'Oeu034588.2' => 'oeu', 'Oeu050846.1' => 'oeu', 'Oeu050849.2' => 'oeu', 'Oeu051063.2' => 'oeu', 'Oeu052368.1' => 'oeu', 'Oeu052370.1' => 'oeu', 'Os01g0210400' => 'osa', 'Os01g0304300' => 'osa', 'Os01g0749100' => 'osa', 'Os02g0745800' => 'osa', 'Os03g0769050' => 'osa', 'Os05g0531500' => 'osa', 'Os06g0724300' => 'osa', 'Os11g0198100' => 'osa', 'Peaxi162Scf00069g01425' => 'pax', 'Peaxi162Scf00280g00811' => 'pax', 'Peaxi162Scf00310g00615' => 'pax', 'Peaxi162Scf00362g00542' => 'pax', 'Peaxi162Scf00461g00310' => 'pax', 'Peaxi162Scf00530g00118' => 'pax', 'Peaxi162Scf00541g00057' => 'pax', 'Peaxi162Scf00661g00017' => 'pax', 'Peaxi162Scf00926g00027' => 'pax', 'Peaxi162Scf01064g00263' => 'pax', 'Peaxi162Scf01211g00135' => 'pax', 'PGR004G2336' => 'pgr', 'PGR042G0327' => 'pgr', 'PGR042G1957' => 'pgr', 'PGR042G2003' => 'pgr', 'PGR042G3929' => 'pgr', 'PGR083G1137' => 'pgr', 'PGR083G1364' => 'pgr', 'PGSC0003DMG400003381' => 'stu', 'PGSC0003DMG400003417' => 'stu', 'PGSC0003DMG400008981' => 'stu', 'PGSC0003DMG400012417' => 'stu', 'PGSC0003DMG400012823' => 'stu', 'PGSC0003DMG400016885' => 'stu', 'PGSC0003DMG400022812' => 'stu', 'PGSC0003DMG400029726' => 'stu', 'PGSC0003DMG401009243' => 'stu', 'PGSC0003DMG401031505' => 'stu', 'PGSC0003DMG402031505' => 'stu', 'Phvul.001G017600' => 'pvu', 'Phvul.002G193500' => 'pvu', 'Phvul.002G228900' => 'pvu', 'Phvul.002G236800' => 'pvu', 'Phvul.003G049500' => 'pvu', 'Phvul.005G072000' => 'pvu', 'Phvul.006G164800' => 'pvu', 'Phvul.006G185100' => 'pvu', 'Phvul.007G090000' => 'pvu', 'Potri.001G399800' => 'ptr', 'Potri.002G149900' => 'ptr', 'Potri.004G044100' => 'ptr', 'Potri.004G177600' => 'ptr', 'Potri.009G138000' => 'ptr', 'Potri.010G094000' => 'ptr', 'Potri.011G053000' => 'ptr', 'Potri.011G119300' => 'ptr', 'Potri.013G113700' => 'ptr', 'Potri.018G107800' => 'ptr', 'Potri.019G084100' => 'ptr', 'Pp3c14_23720' => 'ppa', 'Pp3c16_6340' => 'ppa', 'Pp3c23_13420' => 'ppa', 'Pp3c24_2740' => 'ppa', 'Pp3c25_860' => 'ppa', 'Pp3c8_21750' => 'ppa', 'Prupe.1G273000' => 'ppe', 'Prupe.1G273700' => 'ppe', 'Prupe.1G274100' => 'ppe', 'Prupe.2G023300' => 'ppe', 'Prupe.4G048000' => 'ppe', 'Prupe.4G080400' => 'ppe', 'Prupe.4G181200' => 'ppe', 'Prupe.8G056900' => 'ppe', 'Prupe.8G168700' => 'ppe', 'Psat1g189080' => 'psa', 'Psat1g204760' => 'psa', 'Psat4g175560' => 'psa', 'Psat4g177720' => 'psa', 'Psat5g244240' => 'psa', 'Psat6g010720' => 'psa', 'Psat6g187200' => 'psa', 'Psat7g072040' => 'psa', 'PSO017G3501' => 'pso', 'PSO063G2148' => 'pso', 'PSO063G5608' => 'pso', 'PSO210G6392' => 'pso', 'PSO541G2319' => 'pso', 'PSO541G2836' => 'pso', 'PSO541G4012' => 'pso', 'PSO541G6253' => 'pso', 'PSO675G0580' => 'pso', 'PSO675G0856' => 'pso', 'PSO675G5635' => 'pso', 'PSO675G9157' => 'pso', 'PSO832G1660' => 'pso', 'PSO832G1969' => 'pso', 'QL02p007186' => 'qlo', 'QL02p033904' => 'qlo', 'QL03p064391' => 'qlo', 'QL05p040593' => 'qlo', 'QL05p058242' => 'qlo', 'QL08p021825' => 'qlo', 'QL11p004981' => 'qlo', 'RcHm_v2.0_Chr1g0318301' => 'rch', 'RcHm_v2.0_Chr4g0418501' => 'rch', 'RcHm_v2.0_Chr4g0439971' => 'rch', 'RcHm_v2.0_Chr5g0008541' => 'rch', 'RcHm_v2.0_Chr5g0014101' => 'rch', 'RcHm_v2.0_Chr5g0014131' => 'rch', 'RcHm_v2.0_Chr5g0033621' => 'rch', 'RcHm_v2.0_Chr6g0272041' => 'rch', 'RcHm_v2.0_Chr6g0278831' => 'rch', 'Rhsim02G0130400' => 'rsi', 'Rhsim02G0171100' => 'rsi', 'Rhsim05G0053000' => 'rsi', 'Rhsim05G0053100' => 'rsi', 'Rhsim06G0096500' => 'rsi', 'Rhsim06G0096600' => 'rsi', 'Rhsim06G0199100' => 'rsi', 'Rhsim12G0062300' => 'rsi', 'Rhsim12G0062800' => 'rsi', 'Sabra02G0118600' => 'sbr', 'Sabra04G0027300' => 'sbr', 'Sabra04G0119500' => 'sbr', 'Sabra08G0112500' => 'sbr', 'Sabra11G0036800' => 'sbr', 'Sabra11G0103800' => 'sbr', 'Sabra13G0096300' => 'sbr', 'Sabra16G0262300' => 'sbr', 'Sabra18G0091700' => 'sbr', 'Sabra19G0095400' => 'sbr', 'SalBow6G3080' => 'sbo', 'SalBow7G1157' => 'sbo', 'SalBow7G2123' => 'sbo', 'SalBow7G2285' => 'sbo', 'SalBow7G3537' => 'sbo', 'SalBow8G2947' => 'sbo', 'SalBow8G4463' => 'sbo', 'SalBow8G5466' => 'sbo', 'Sc01g0001750' => 'sci', 'Sc02g0006640' => 'sci', 'Sc02g0006670' => 'sci', 'Sc04g0008220' => 'sci', 'Sc05g0006190' => 'sci', 'Sc08g0002760' => 'sci', 'Sc17g0006170' => 'sci', 'Sc22g0002050' => 'sci', 'Sc23g0001190' => 'sci', 'Sc24g0000980' => 'sci', 'Sed0006245' => 'sed', 'Sed0007543' => 'sed', 'Sed0009411' => 'sed', 'Sed0010765' => 'sed', 'Sed0012944' => 'sed', 'Sed0014682' => 'sed', 'Sed0016174' => 'sed', 'Sed0016796' => 'sed', 'Sed0020317' => 'sed', 'Sed0021467' => 'sed', 'SEGI_01316' => 'sgi', 'SEGI_03374' => 'sgi', 'SEGI_16265' => 'sgi', 'SEGI_18569' => 'sgi', 'SEGI_20351' => 'sgi', 'SEGI_26395' => 'sgi', 'SEGI_29469' => 'sgi', 'SEGI_34771' => 'sgi', 'SEGI_36769' => 'sgi', 'SEGI_37139' => 'sgi', 'SGA_v2.0_scaffold100G29687' => 'sas', 'SGA_v2.0_scaffold118G32472' => 'sas', 'SGA_v2.0_scaffold14G07051' => 'sas', 'SGA_v2.0_scaffold183G39845' => 'sas', 'SGA_v2.0_scaffold1G00174' => 'sas', 'SGA_v2.0_scaffold22G09714' => 'sas', 'SGA_v2.0_scaffold333G48992' => 'sas', 'SGA_v2.0_scaffold46G17491' => 'sas', 'SGA_v2.0_scaffold49G18294' => 'sas', 'SGA_v2.0_scaffold63G21658' => 'sas', 'SHI01741' => 'shi', 'SHI05771' => 'shi', 'SHI18077' => 'shi', 'SHI20525' => 'shi', 'SHI20527' => 'shi', 'SHI20528' => 'shi', 'SMO172G0185' => 'smo', 'SMO198G0020' => 'smo', 'SMO351G0006' => 'smo', 'SMO356G0118' => 'smo', 'SMO358G0296' => 'smo', 'SMO367G0079' => 'smo', 'SMO367G1277' => 'smo', 'Solyc01g014220.3' => 'sly', 'Solyc01g111770.2' => 'sly', 'Solyc02g078180.3' => 'sly', 'Solyc03g006430.3' => 'sly', 'Solyc03g006456.1' => 'sly', 'Solyc03g079860.2' => 'sly', 'Solyc04g079770.3' => 'sly', 'Solyc05g007430.4' => 'sly', 'Solyc07g063150.3' => 'sly', 'Solyc08g016620.3' => 'sly', 'Solyc09g057590.3' => 'sly', 'Solyc09g057600.1' => 'sly', 'Solyc10g009050.3' => 'sly', 'Solyc11g017420.2' => 'sly', 'Sopen01g053810' => 'spe', 'Sopen02g023040' => 'spe', 'Sopen03g002440' => 'spe', 'Sopen04g033350' => 'spe', 'Sopen05g003310' => 'spe', 'Sopen07g004050' => 'spe', 'Sopen07g031340' => 'spe', 'Sopen08g006990' => 'spe', 'Sopen10g004830' => 'spe', 'Sopen11g009370' => 'spe', 'Sp1g24450' => 'spa', 'Sp1g29670' => 'spa', 'Sp1g39600' => 'spa', 'Sp2g11080' => 'spa', 'Sp2g13970' => 'spa', 'Sp4g16130' => 'spa', 'Sp6g13080' => 'spa', 'Sp7g37270' => 'spa', 'TAR371G0065' => 'tar', 'TAR376G0340' => 'tar', 'TAR376G0435' => 'tar', 'TAR381G0002' => 'tar', 'TAR381G1236' => 'tar', 'TAR624G0055' => 'tar', 'TAR624G0324' => 'tar', 'TAR624G0696' => 'tar', 'TAR624G0906' => 'tar', 'TAR625G0107' => 'tar', 'TAR626G0015' => 'tar', 'TAR626G1356' => 'tar', 'TAR627G0888' => 'tar', 'TAR628G0399' => 'tar', 'TAR628G1327' => 'tar', 'TAR629G2831' => 'tar', 'TAR629G2874' => 'tar', 'TAR633G1432' => 'tar', 'TAR633G2771' => 'tar', 'THA.LOC104803394' => 'tha', 'THA.LOC104805153' => 'tha', 'THA.LOC104806784' => 'tha', 'THA.LOC104810473' => 'tha', 'THA.LOC104813100' => 'tha', 'THA.LOC104814215' => 'tha', 'THA.LOC104815554' => 'tha', 'THA.LOC104820544' => 'tha', 'THA.LOC104824754' => 'tha', 'THA.LOC104827717' => 'tha', 'Thecc.02G031400' => 'tca', 'Thecc.02G055900' => 'tca', 'Thecc.02G350800' => 'tca', 'Thecc.06G150900' => 'tca', 'Thecc.06G186600' => 'tca', 'Thecc.07G089600' => 'tca', 'Thecc.08G020400' => 'tca', 'Thecc.08G182100' => 'tca', 'Thhalv10000873m.g' => 'esa', 'Thhalv10004185m.g' => 'esa', 'Thhalv10006981m.g' => 'esa', 'Thhalv10007204m.g' => 'esa', 'Thhalv10011374m.g' => 'esa', 'Thhalv10013482m.g' => 'esa', 'Thhalv10017801m.g' => 'esa', 'Thhalv10024983m.g' => 'esa', 'TPR.G12072' => 'tpr', 'TPR.G15769' => 'tpr', 'TPR.G16504' => 'tpr', 'TPR.G16506' => 'tpr', 'TPR.G24345' => 'tpr', 'TPR.G26666' => 'tpr', 'TPR.G27320' => 'tpr', 'TPR.G31819' => 'tpr', 'TPR.G38879' => 'tpr', 'TPR.G39015' => 'tpr', 'TPR.G8819' => 'tpr', 'TWI09G0924' => 'twi', 'TWI12G0811' => 'twi', 'TWI12G1294' => 'twi', 'TWI31G0150' => 'twi', 'TWI36G1262' => 'twi', 'TWI38G1287' => 'twi', 'TWI38G1633' => 'twi', 'TWI38G1982' => 'twi', 'TWI39G0116' => 'twi', 'TWI60G1011' => 'twi', 'TWI63G0171' => 'twi', 'TWI73G0839' => 'twi', 'TWI79G1511' => 'twi', 'unitig_0.g915' => 'ugi', 'unitig_0.g916' => 'ugi', 'unitig_21.g20219' => 'ugi', 'unitig_21.g20416' => 'ugi', 'unitig_578.g16132' => 'ugi', 'unitig_578.g16718' => 'ugi', 'unitig_62.g23481' => 'ugi', 'unitig_744.g24535' => 'ugi', 'unitig_749.g13525' => 'ugi', 'vmacro01248' => 'vma', 'vmacro02290' => 'vma', 'vmacro10946' => 'vma', 'vmacro11865' => 'vma', 'vmacro12493' => 'vma', 'vmacro17322' => 'vma', 'vmacro21599' => 'vma', 'vmacro23041' => 'vma', 'VMungo0251G0004' => 'vmu', 'VMungo0251G2639' => 'vmu', 'VMungo0251G2967' => 'vmu', 'VMungo0540G0864' => 'vmu', 'VMungo0540G1569' => 'vmu', 'VMungo0647G0317' => 'vmu', 'VMungo0720G1373' => 'vmu', 'VMungo0720G1508' => 'vmu', 'VMungo1080G0485' => 'vmu', 'VMungo1215G3177' => 'vmu', 'Zm00001eb112600' => 'zma', 'Zm00001eb120220' => 'zma', 'Zm00001eb153240' => 'zma', 'Zm00001eb168880' => 'zma', 'Zm00001eb213920' => 'zma', 'Zm00001eb228280' => 'zma', 'Zm00001eb254580' => 'zma', 'Zm00001eb272180' => 'zma', 'Zm00001eb293190' => 'zma', 'Zm00001eb322930' => 'zma', 'Zm00001eb353360' => 'zma', 'Zm00001eb353390' => 'zma', 'Zm00001eb353430' => 'zma', 'Zm00001eb353440' => 'zma', 'Zm00001eb353780' => 'zma' ) $gf_id = 'HOM05D000499' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000499' ) $data_identifier = 'HOM05D000499' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 29, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 12, 'amhyb' => (int) 8, 'aly' => (int) 12, 'aox' => (int) 9, 'arhy' => (int) 26, 'ath' => (int) 8, 'atr' => (int) 7, 'acertr' => (int) 10, 'cqu' => (int) 15, 'bca' => (int) 29, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 11, 'cansat' => (int) 8, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 9, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 8, 'cpa' => (int) 10, 'csa' => (int) 7, 'camsi' => (int) 20, 'dca' => (int) 8, 'din' => (int) 12, 'dzi' => (int) 14, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 6, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 38, 'gra' => (int) 16, 'vvi' => (int) 8, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 5, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 11, 'lja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 11, 'mpo' => (int) 3, 'mbi' => (int) 14, 'mdo' => (int) 14, 'mtr' => (int) 8, 'cme' => (int) 9, 'egut' => (int) 9, 'ama' => (int) 11, 'nta' => (int) 17, 'nnu' => (int) 11, 'oeu' => (int) 18, 'osa' => (int) 8, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 6, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 9, 'rsi' => (int) 9, 'sbr' => (int) 10, 'sbo' => (int) 8, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 10, 'sas' => (int) 10, 'shi' => (int) 6, 'smo' => (int) 7, 'sly' => (int) 14, 'spe' => (int) 10, 'spa' => (int) 8, 'tar' => (int) 19, 'tha' => (int) 10, 'tca' => (int) 8, 'esa' => (int) 8, 'tpr' => (int) 11, 'twi' => (int) 13, 'ugi' => (int) 9, 'vma' => (int) 8, 'vmu' => (int) 10, 'zma' => (int) 15 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb353780' $species_info = array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ) $local_species = 'vmu' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000499', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1066', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p29780' => 'bna', 'A02p33180' => 'bna', 'A03p16470' => 'bna', 'A03p66010' => 'bna', 'A04p25970' => 'bna', 'A06p01270' => 'bna', 'A06p46080' => 'bna', 'A07p11400' => 'bna', 'A08p01840' => 'bna', 'A08p08230' => 'bna', 'A08p25740' => 'bna', 'A09p32070' => 'bna', 'A09p37830' => 'bna', 'A09p42840' => 'bna', 'A09p42850' => 'bna', 'Aa31LG10G2060' => 'aar', 'Aa31LG2G7410' => 'aar', 'Aa31LG6G10200' => 'aar', 'Aa31LG6G16680' => 'aar', 'Aa31LG6G8470' => 'aar', 'Aa31LG9G12730' => 'aar', 'Aa31LG9G13680' => 'aar', 'Aa31LG9G14920' => 'aar', 'Aa31LG9G6650' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4977' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5467' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3254' => 'aag', 'Actinidia02578' => 'ach', 'Actinidia07693' => 'ach', 'Actinidia08413' => 'ach', 'Actinidia08414' => 'ach', 'Actinidia15289' => 'ach', 'Actinidia19871' => 'ach', 'Actinidia21475' => 'ach', 'Actinidia22576' => 'ach', 'Actinidia28327' => 'ach', 'Actinidia32491' => 'ach', 'Actinidia39463' => 'ach', 'Actinidia39571' => 'ach', 'Ah.01g013750' => 'amhyb', 'Ah.01g023210' => 'amhyb', 'Ah.04g164850' => 'amhyb', 'Ah.05g178060' => 'amhyb', 'Ah.07g204270' => 'amhyb', 'Ah.07g208480' => 'amhyb', 'Ah.09g237410' => 'amhyb', 'Ah.14g089460' => 'amhyb', 'AL1G41790' => 'aly', 'AL1G49050' => 'aly', 'AL1G53810' => 'aly', 'AL1G61400' => 'aly', 'AL4G18580' => 'aly', 'AL5G12510' => 'aly', 'AL5G12540' => 'aly', 'AL6G43230' => 'aly', 'AL7G10370' => 'aly', 'AL7G19250' => 'aly', 'AL8G12240' => 'aly', 'AL8G18540' => 'aly', 'Aqoxy1G02409' => 'aox', 'Aqoxy2G03993' => 'aox', 'Aqoxy3G03357' => 'aox', 'Aqoxy4G00785' => 'aox', 'Aqoxy5G02598' => 'aox', 'Aqoxy6G00132' => 'aox', 'Aqoxy7G01776' => 'aox', 'Aqoxy7G02316' => 'aox', 'Aqoxy7G03973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.12AFKW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B8730' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27IQR1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3F75VG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3RE0GA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41TCQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.527VTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FIR39' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5W8UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DA38EV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ63HS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H1I32C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HC27T5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4M8AP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7N3CZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9UVDZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LS1NQA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT1D4B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SKC4TM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCFV76' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF9Q1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQWD9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1ZM88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WE07RT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YCK7VH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJE6Q6' => 'arhy', 'AT1G28240' => 'ath', 'AT1G34550' => 'ath', 'AT1G53040' => 'ath', 'AT2G02910' => 'ath', 'AT4G09630' => 'ath', 'AT4G38500' => 'ath', 'AT5G42660' => 'ath', 'AT5G46220' => 'ath', 'ATR0152G026' => 'atr', 'ATR0564G343' => 'atr', 'ATR0706G151' => 'atr', 'ATR0733G207' => 'atr', 'ATR0751G234' => 'atr', 'ATR0807G048' => 'atr', 'ATR1091G084' => 'atr', 'Atru.chr10.1229' => 'acertr', 'Atru.chr10.1230' => 'acertr', 'Atru.chr10.1874' => 'acertr', 'Atru.chr11.1808' => 'acertr', 'Atru.chr13.1795' => 'acertr', 'Atru.chr13.570' => 'acertr', 'Atru.chr2.2608' => 'acertr', 'Atru.chr2.2609' => 'acertr', 'Atru.chr5.3428' => 'acertr', 'Atru.chr8.1171' => 'acertr', 'AUR62004651' => 'cqu', 'AUR62008675' => 'cqu', 'AUR62010014' => 'cqu', 'AUR62013004' => 'cqu', 'AUR62014825' => 'cqu', 'AUR62015015' => 'cqu', 'AUR62015151' => 'cqu', 'AUR62017020' => 'cqu', 'AUR62019422' => 'cqu', 'AUR62023570' => 'cqu', 'AUR62025571' => 'cqu', 'AUR62029098' => 'cqu', 'AUR62033863' => 'cqu', 'AUR62034296' => 'cqu', 'AUR62040075' => 'cqu', 'BcaB02g07334' => 'bca', 'BcaB02g10575' => 'bca', 'BcaB03g12119' => 'bca', 'BcaB03g12120' => 'bca', 'BcaB03g13945' => 'bca', 'BcaB04g17123' => 'bca', 'BcaB04g17867' => 'bca', 'BcaB04g19839' => 'bca', 'BcaB07g30317' => 'bca', 'BcaB07g32432' => 'bca', 'BcaB07g33362' => 'bca', 'BcaB08g36611' => 'bca', 'BcaC01g00028' => 'bca', 'BcaC01g01356' => 'bca', 'BcaC01g02034' => 'bca', 'BcaC01g06051' => 'bca', 'BcaC03g16839' => 'bca', 'BcaC03g17176' => 'bca', 'BcaC05g26829' => 'bca', 'BcaC06g31490' => 'bca', 'BcaC06g35344' => 'bca', 'BcaC06g36570' => 'bca', 'BcaC07g37537' => 'bca', 'BcaC08g43491' => 'bca', 'BcaC08g43773' => 'bca', 'BcaNung00234' => 'bca', 'BcaNung01982' => 'bca', 'BcaNung03707' => 'bca', 'BcaNung06454' => 'bca', 'BolC2t10762H' => 'bol', 'BolC2t11191H' => 'bol', 'BolC3t14322H' => 'bol', 'BolC3t19747H' => 'bol', 'BolC3t21425H' => 'bol', 'BolC4t27800H' => 'bol', 'BolC5t31423H' => 'bol', 'BolC6t35951H' => 'bol', 'BolC6t36282H' => 'bol', 'BolC7t40678H' => 'bol', 'BolC7t40679H' => 'bol', 'BolC7t42222H' => 'bol', 'BolC7t43492H' => 'bol', 'BolC7t46785H' => 'bol', 'BolC8t47853H' => 'bol', 'BolC9t56805H' => 'bol', 'BraA02t08000Z' => 'bra', 'BraA02t08341Z' => 'bra', 'BraA03t10936Z' => 'bra', 'BraA03t15657Z' => 'bra', 'BraA04t18100Z' => 'bra', 'BraA05t20523Z' => 'bra', 'BraA06t23353Z' => 'bra', 'BraA06t27473Z' => 'bra', 'BraA06t27769Z' => 'bra', 'BraA07t28928Z' => 'bra', 'BraA08t32236Z' => 'bra', 'BraA08t32841Z' => 'bra', 'BraA08t34524Z' => 'bra', 'BraA09t38742Z' => 'bra', 'BraA09t39295Z' => 'bra', 'C02p47180' => 'bna', 'C02p50990' => 'bna', 'C03p19360' => 'bna', 'C03p74950' => 'bna', 'C03p91000' => 'bna', 'C04p63260' => 'bna', 'C05p27050' => 'bna', 'C06p08750' => 'bna', 'C06p11490' => 'bna', 'C07p02820' => 'bna', 'C07p17180' => 'bna', 'C07p29440' => 'bna', 'C07p63730' => 'bna', 'C09p39260' => 'bna', 'CAN.G1164.34' => 'can', 'CAN.G1164.39' => 'can', 'CAN.G1530.3' => 'can', 'CAN.G162.61' => 'can', 'CAN.G176.6' => 'can', 'CAN.G289.49' => 'can', 'CAN.G370.21' => 'can', 'CAN.G370.22' => 'can', 'CAN.G371.117' => 'can', 'CAN.G58.37' => 'can', 'CAN.G588.98' => 'can', 'CANSAT21G2266' => 'cansat', 'CANSAT25G2799' => 'cansat', 'CANSAT35G0862' => 'cansat', 'CANSAT35G1704' => 'cansat', 'CANSAT35G1760' => 'cansat', 'CANSAT56G3971' => 'cansat', 'CANSAT56G4116' => 'cansat', 'CANSAT80G1259' => 'cansat', 'CARHR027730' => 'chi', 'CARHR033880' => 'chi', 'CARHR043270' => 'chi', 'CARHR145330' => 'chi', 'CARHR145340' => 'chi', 'CARHR175570' => 'chi', 'CARHR181570' => 'chi', 'CARHR258470' => 'chi', 'CARHR260490' => 'chi', 'CARHR294220' => 'chi', 'Carub.0001s2668' => 'cru', 'Carub.0001s3257' => 'cru', 'Carub.0001s4220' => 'cru', 'Carub.0005s0179' => 'cru', 'Carub.0006s2807' => 'cru', 'Carub.0007s0039' => 'cru', 'Carub.0008s0169' => 'cru', 'Carub.0008s0636' => 'cru', 'Ca_00338_v3' => 'car', 'Ca_00542_v3' => 'car', 'Ca_01844_v3' => 'car', 'Ca_10611_v3' => 'car', 'Ca_13326_v3' => 'car', 'Ca_17944_v3' => 'car', 'Ca_18546_v3' => 'car', 'Ca_24219_v3' => 'car', 'Ca_29972_v3' => 'car', 'CBR_g3681' => 'cbr', 'CBR_g40021' => 'cbr', 'Cc01_g08140' => 'ccan', 'Cc02_g13410' => 'ccan', 'Cc02_g37480' => 'ccan', 'Cc05_g12030' => 'ccan', 'Cc09_g03370' => 'ccan', 'Cc09_g10300' => 'ccan', 'Cc10_g03530' => 'ccan', 'Cc10_g11380' => 'ccan', 'CDE01G0176' => 'cde', 'CDE02G0675' => 'cde', 'CDE02G0942' => 'cde', 'CDE02G1153' => 'cde', 'CDE02G4177' => 'cde', 'CDE04G2117' => 'cde', 'CDE04G2736' => 'cde', 'CDE08G1161' => 'cde', 'CDE09G1238' => 'cde', 'Cfa000467' => 'cfa', 'Cfa000947' => 'cfa', 'Cfa004969' => 'cfa', 'Cfa005284' => 'cfa', 'Cfa008993' => 'cfa', 'Cfa018187' => 'cfa', 'Cfa018454' => 'cfa', 'Cfa020585' => 'cfa', 'Ciclev10000424m.g' => 'ccl', 'Ciclev10003605m.g' => 'ccl', 'Ciclev10007828m.g' => 'ccl', 'Ciclev10014620m.g' => 'ccl', 'Ciclev10015169m.g' => 'ccl', 'Ciclev10018291m.g' => 'ccl', 'Ciclev10028256m.g' => 'ccl', 'Ciclev10033822m.g' => 'ccl', 'CiPaw.05G060300' => 'cil', 'CiPaw.05G085000' => 'cil', 'CiPaw.06G083700' => 'cil', 'CiPaw.06G120300' => 'cil', 'CiPaw.09G060500' => 'cil', 'CiPaw.09G123800' => 'cil', 'CiPaw.11G169700' => 'cil', 'CiPaw.12G118300' => 'cil', 'CiPaw.15G071000' => 'cil', 'CiPaw.15G081900' => 'cil', 'ClCG01G024610' => 'cla', 'ClCG03G006070' => 'cla', 'ClCG05G019250' => 'cla', 'ClCG09G009500' => 'cla', 'ClCG11G008200' => 'cla', 'ClCG11G018080' => 'cla', 'COL.COLO4_17373' => 'col', 'COL.COLO4_22994' => 'col', 'COL.COLO4_26389' => 'col', 'COL.COLO4_27170' => 'col', 'COL.COLO4_31074' => 'col', 'COL.COLO4_31465' => 'col', 'COL.COLO4_36438' => 'col', 'COL.COLO4_36439' => 'col', 'Cpa.g.c38781' => 'cpa', 'Cpa.g.sc128.12' => 'cpa', 'Cpa.g.sc166.7' => 'cpa', 'Cpa.g.sc166.8' => 'cpa', 'Cpa.g.sc20.111' => 'cpa', 'Cpa.g.sc27.31' => 'cpa', 'Cpa.g.sc64.36' => 'cpa', 'Cpa.g.sc64.37' => 'cpa', 'Cpa.g.sc66.49' => 'cpa', 'Cpa.g.sc80.64' => 'cpa', 'CsaV3_1G012320' => 'csa', 'CsaV3_2G008480' => 'csa', 'CsaV3_2G033450' => 'csa', 'CsaV3_3G044830' => 'csa', 'CsaV3_4G033710' => 'csa', 'CsaV3_6G051730' => 'csa', 'CsaV3_7G025350' => 'csa', 'CSS0001067' => 'camsi', 'CSS0005996' => 'camsi', 'CSS0006590' => 'camsi', 'CSS0009673' => 'camsi', 'CSS0010201' => 'camsi', 'CSS0010549' => 'camsi', 'CSS0011364' => 'camsi', 'CSS0014473' => 'camsi', 'CSS0014961' => 'camsi', 'CSS0020191' => 'camsi', 'CSS0021165' => 'camsi', 'CSS0022306' => 'camsi', 'CSS0030591' => 'camsi', 'CSS0030696' => 'camsi', 'CSS0032653' => 'camsi', 'CSS0037487' => 'camsi', 'CSS0041102' => 'camsi', 'CSS0041261' => 'camsi', 'CSS0046246' => 'camsi', 'CSS0049256' => 'camsi', 'DCAR_004075' => 'dca', 'DCAR_011538' => 'dca', 'DCAR_019553' => 'dca', 'DCAR_020952' => 'dca', 'DCAR_021739' => 'dca', 'DCAR_027407' => 'dca', 'DCAR_027913' => 'dca', 'DCAR_028066' => 'dca', 'Dinv05899' => 'din', 'Dinv07563' => 'din', 'Dinv08010' => 'din', 'Dinv14125' => 'din', 'Dinv20172' => 'din', 'Dinv30743' => 'din', 'Dinv31229' => 'din', 'Dinv34162' => 'din', 'Dinv36028' => 'din', 'Dinv39368' => 'din', 'Dinv40565' => 'din', 'Dinv41706' => 'din', 'Duzib052G0089' => 'dzi', 'Duzib116G0641' => 'dzi', 'Duzib132G0069' => 'dzi', 'Duzib132G1219' => 'dzi', 'Duzib147G0278' => 'dzi', 'Duzib160G0480' => 'dzi', 'Duzib170G0661' => 'dzi', 'Duzib177G0591' => 'dzi', 'Duzib187G1353' => 'dzi', 'Duzib192G0858' => 'dzi', 'Duzib192G0883' => 'dzi', 'Duzib213G0506' => 'dzi', 'Duzib235G0289' => 'dzi', 'Duzib251G0422' => 'dzi', 'ECA232G3898' => 'eca', 'ECA233G5950' => 'eca', 'ECA234G1699' => 'eca', 'ECA234G2421' => 'eca', 'ECA236G0426' => 'eca', 'ECA236G4331' => 'eca', 'ECA248G2573' => 'eca', 'EL10Ac1g00077' => 'bvu', 'EL10Ac1g01746' => 'bvu', 'EL10Ac2g03464' => 'bvu', 'EL10Ac4g08176' => 'bvu', 'EL10Ac7g17521' => 'bvu', 'EL10Ac8g20386' => 'bvu', 'EL10Ac9g21343' => 'bvu', 'EL10Ac9g22688' => 'bvu', 'Eucgr.B03434' => 'egr', 'Eucgr.D00618' => 'egr', 'Eucgr.E02395' => 'egr', 'Eucgr.F01129' => 'egr', 'Eucgr.F02622' => 'egr', 'Eucgr.F04207' => 'egr', 'FAN01G0570' => 'fan', 'FAN03G3351' => 'fan', 'FAN06G3702' => 'fan', 'FAN07G2149' => 'fan', 'FAN10G3758' => 'fan', 'FAN11G1170' => 'fan', 'FAN11G2050' => 'fan', 'FAN11G2724' => 'fan', 'FAN12G1700' => 'fan', 'FAN12G2028' => 'fan', 'FAN15G1160' => 'fan', 'FAN15G3063' => 'fan', 'FAN16G2540' => 'fan', 'FAN16G3077' => 'fan', 'FAN16G3624' => 'fan', 'FAN17G0221' => 'fan', 'FAN20G2492' => 'fan', 'FAN20G2905' => 'fan', 'FAN21G0548' => 'fan', 'FAN21G1300' => 'fan', 'FAN22G0077' => 'fan', 'FAN22G1315' => 'fan', 'FAN24G1280' => 'fan', 'FAN24G1445' => 'fan', 'FAN24G3527' => 'fan', 'FAN25G0464' => 'fan', 'FAN25G2885' => 'fan', 'FAN25G3270' => 'fan', 'FAN27G1101' => 'fan', 'FAN27G2846' => 'fan', 'FAN27G3524' => 'fan', 'FvH4_2g11770' => 'fve', 'FvH4_2g15630' => 'fve', 'FvH4_3g05570' => 'fve', 'FvH4_3g09110' => 'fve', 'FvH4_3g19940' => 'fve', 'FvH4_4g04821' => 'fve', 'FvH4_4g31480' => 'fve', 'FvH4_7g01740' => 'fve', 'Glyma.05G130400' => 'gma', 'Glyma.05G156400' => 'gma', 'Glyma.07G197000' => 'gma', 'Glyma.08G085151' => 'gma', 'Glyma.08G114500' => 'gma', 'Glyma.08G300400' => 'gma', 'Glyma.10G215800' => 'gma', 'Glyma.12G224400' => 'gma', 'Glyma.13G179300' => 'gma', 'Glyma.13G218151' => 'gma', 'Glyma.13G238800' => 'gma', 'Glyma.13G276900' => 'gma', 'Glyma.14G078200' => 'gma', 'Glyma.15G074500' => 'gma', 'Glyma.15G094100' => 'gma', 'Glyma.17G247200' => 'gma', 'Glyma.18G120100' => 'gma', 'Glyma.20G176000' => 'gma', 'Gohir.A01G063600' => 'ghi', 'Gohir.A01G170301' => 'ghi', 'Gohir.A02G060500' => 'ghi', 'Gohir.A05G133850' => 'ghi', 'Gohir.A05G161400' => 'ghi', 'Gohir.A06G012900' => 'ghi', 'Gohir.A06G035901' => 'ghi', 'Gohir.A06G127100' => 'ghi', 'Gohir.A06G210500' => 'ghi', 'Gohir.A08G008650' => 'ghi', 'Gohir.A09G072700' => 'ghi', 'Gohir.A09G088301' => 'ghi', 'Gohir.A10G040600' => 'ghi', 'Gohir.A12G036300' => 'ghi', 'Gohir.A12G143350' => 'ghi', 'Gohir.A12G165500' => 'ghi', 'Gohir.A13G145700' => 'ghi', 'Gohir.D01G050000' => 'ghi', 'Gohir.D01G051366' => 'ghi', 'Gohir.D01G161350' => 'ghi', 'Gohir.D02G065900' => 'ghi', 'Gohir.D05G164200' => 'ghi', 'Gohir.D05G355500' => 'ghi', 'Gohir.D06G010400' => 'ghi', 'Gohir.D06G111250' => 'ghi', 'Gohir.D06G132000' => 'ghi', 'Gohir.D06G210500' => 'ghi', 'Gohir.D07G165675' => 'ghi', 'Gohir.D08G062240' => 'ghi', 'Gohir.D08G086101' => 'ghi', 'Gohir.D08G138060' => 'ghi', 'Gohir.D09G072300' => 'ghi', 'Gohir.D10G041400' => 'ghi', 'Gohir.D11G191020' => 'ghi', 'Gohir.D11G212066' => 'ghi', 'Gohir.D12G036300' => 'ghi', 'Gohir.D12G168600' => 'ghi', 'Gohir.D13G150600' => 'ghi', 'Gorai.001G057300' => 'gra', 'Gorai.002G069900' => 'gra', 'Gorai.002G200000' => 'gra', 'Gorai.003G067600' => 'gra', 'Gorai.005G074800' => 'gra', 'Gorai.006G087300' => 'gra', 'Gorai.008G037500' => 'gra', 'Gorai.008G181400' => 'gra', 'Gorai.009G169400' => 'gra', 'Gorai.009G387900' => 'gra', 'Gorai.010G013300' => 'gra', 'Gorai.010G153800' => 'gra', 'Gorai.010G255800' => 'gra', 'Gorai.011G043700' => 'gra', 'Gorai.011G198900' => 'gra', 'Gorai.013G168400' => 'gra', 'GSVIVG01005212001' => 'vvi', 'GSVIVG01006163001' => 'vvi', 'GSVIVG01009625001' => 'vvi', 'GSVIVG01014338001' => 'vvi', 'GSVIVG01020005001' => 'vvi', 'GSVIVG01021450001' => 'vvi', 'GSVIVG01023975001' => 'vvi', 'GSVIVG01034490001' => 'vvi', 'HanXRQChr04g0112071' => 'han', 'HanXRQChr05g0131151' => 'han', 'HanXRQChr09g0262371' => 'han', 'HanXRQChr09g0268401' => 'han', 'HanXRQChr10g0279241' => 'han', 'HanXRQChr10g0297961' => 'han', 'HanXRQChr11g0326231' => 'han', 'HanXRQChr11g0328471' => 'han', 'HanXRQChr16g0507941' => 'han', 'HanXRQChr17g0560211' => 'han', 'Haze_02108' => 'cav', 'Haze_02428' => 'cav', 'Haze_05593' => 'cav', 'Haze_06448' => 'cav', 'Haze_09427' => 'cav', 'Haze_12022' => 'cav', 'Haze_17612' => 'cav', 'Haze_17928' => 'cav', 'Hma1.2p1_0032F.1_g019250' => 'hma', 'Hma1.2p1_0163F.1_g072690' => 'hma', 'Hma1.2p1_0265F.1_g106710' => 'hma', 'Hma1.2p1_0286F.1_g113970' => 'hma', 'Hma1.2p1_0363F.1_g136640' => 'hma', 'Hma1.2p1_0584F.1_g183470' => 'hma', 'Hma1.2p1_0885F.1_g232570' => 'hma', 'HPP92_006022' => 'vpl', 'HPP92_007320' => 'vpl', 'HPP92_011521' => 'vpl', 'HPP92_019387' => 'vpl', 'HPP92_024038' => 'vpl', 'Hund05891' => 'sun', 'Hund06450' => 'sun', 'Hund12053' => 'sun', 'Hund16800' => 'sun', 'Hund21222' => 'sun', 'Hund22896' => 'sun', 'Hund23746' => 'sun', 'Hund27083' => 'sun', 'Lalb_Chr02g0141831' => 'lal', 'Lalb_Chr02g0141841' => 'lal', 'Lalb_Chr05g0220411' => 'lal', 'Lalb_Chr06g0162081' => 'lal', 'Lalb_Chr09g0327651' => 'lal', 'Lalb_Chr13g0295051' => 'lal', 'Lalb_Chr15g0086801' => 'lal', 'Lalb_Chr16g0383781' => 'lal', 'Lalb_Chr16g0383791' => 'lal', 'Lalb_Chr18g0055441' => 'lal', 'Lalb_Chr18g0059611' => 'lal', 'Lalb_Chr20g0109661' => 'lal', 'Lalb_Chr20g0109831' => 'lal', 'Lalb_Chr20g0121871' => 'lal', 'Lalb_Chr22g0355361' => 'lal', 'Lalb_Chr25g0286371' => 'lal', 'Lj1A1187G43' => 'lonja', 'Lj1A1205T50' => 'lonja', 'Lj1A800G33' => 'lonja', 'Lj1C1187T7' => 'lonja', 'Lj1C843T11' => 'lonja', 'Lj1g0010940' => 'lja', 'Lj2A288T69' => 'lonja', 'Lj3g0024276' => 'lja', 'Lj4A47T76' => 'lonja', 'Lj4g0005805' => 'lja', 'Lj4g0006097' => 'lja', 'Lj4g0008528' => 'lja', 'Lj4g0024907' => 'lja', 'Lj5g0012472' => 'lja', 'Lj5g0018648' => 'lja', 'Lj6C789G1' => 'lonja', 'Lj6g0004000' => 'lja', 'Lj7A292G67' => 'lonja', 'Lj7A292T64' => 'lonja', 'Lj9A400T58' => 'lonja', 'Lsat_1_v5_gn_1_126181' => 'lsa', 'Lsat_1_v5_gn_4_123041' => 'lsa', 'Lsat_1_v5_gn_4_133620' => 'lsa', 'Lsat_1_v5_gn_4_53221' => 'lsa', 'Lsat_1_v5_gn_4_71961' => 'lsa', 'Lsat_1_v5_gn_7_105241' => 'lsa', 'Lsat_1_v5_gn_7_21361' => 'lsa', 'Lsat_1_v5_gn_7_28860' => 'lsa', 'Lsat_1_v5_gn_7_31260' => 'lsa', 'Lsat_1_v5_gn_8_52801' => 'lsa', 'Manes.02G191400' => 'mes', 'Manes.03G110100' => 'mes', 'Manes.04G071100' => 'mes', 'Manes.05G100500' => 'mes', 'Manes.05G164700' => 'mes', 'Manes.15G087000' => 'mes', 'Manes.15G121500' => 'mes', 'Manes.16G028300' => 'mes', 'Manes.17G046100' => 'mes', 'Manes.17G069800' => 'mes', 'Manes.18G100500' => 'mes', 'Mapoly0002s0109' => 'mpo', 'Mapoly0024s0007' => 'mpo', 'Mapoly0089s0032' => 'mpo', 'MBI04_g42241_MAGBIO' => 'mbi', 'MBI05_g11988_MAGBIO' => 'mbi', 'MBI05_g35452_MAGBIO' => 'mbi', 'MBI07_g30179_MAGBIO' => 'mbi', 'MBI07_g35859_MAGBIO' => 'mbi', 'MBI07_g35860_MAGBIO' => 'mbi', 'MBI07_g37166_MAGBIO' => 'mbi', 'MBI08_g18172_MAGBIO' => 'mbi', 'MBI09_g08441_MAGBIO' => 'mbi', 'MBI13_g01676_MAGBIO' => 'mbi', 'MBI14_g42955_MAGBIO' => 'mbi', 'MBI16_g13161_MAGBIO' => 'mbi', 'MBI17_g27204_MAGBIO' => 'mbi', 'MBI19_g21595_MAGBIO' => 'mbi', 'MD00G1148400' => 'mdo', 'MD02G1301200' => 'mdo', 'MD03G1227800' => 'mdo', 'MD05G1041100' => 'mdo', 'MD05G1124800' => 'mdo', 'MD05G1284000' => 'mdo', 'MD05G1338800' => 'mdo', 'MD05G1338900' => 'mdo', 'MD07G1022800' => 'mdo', 'MD10G1047500' => 'mdo', 'MD10G1127500' => 'mdo', 'MD10G1262300' => 'mdo', 'MD10G1293800' => 'mdo', 'MD16G1074300' => 'mdo', 'Medtr1g021670' => 'mtr', 'Medtr1g096320' => 'mtr', 'Medtr2g013690' => 'mtr', 'Medtr2g019450' => 'mtr', 'Medtr2g085170' => 'mtr', 'Medtr4g088785' => 'mtr', 'Medtr8g055930' => 'mtr', 'Medtr8g085850' => 'mtr', 'MELO3C002605.2' => 'cme', 'MELO3C003891.2' => 'cme', 'MELO3C004012.2' => 'cme', 'MELO3C007134.2' => 'cme', 'MELO3C008118.2' => 'cme', 'MELO3C016700.2' => 'cme', 'MELO3C024127.2' => 'cme', 'MELO3C033361.2' => 'cme', 'MELO3C033362.2' => 'cme', 'Migut.C00430' => 'egut', 'Migut.C01246' => 'egut', 'Migut.E00101' => 'egut', 'Migut.H01486' => 'egut', 'Migut.H01939' => 'egut', 'Migut.K00360' => 'egut', 'Migut.M00910' => 'egut', 'Migut.M01139' => 'egut', 'Migut.N02677' => 'egut', 'MSTRG.13252' => 'ama', 'MSTRG.14701' => 'ama', 'MSTRG.1521' => 'ama', 'MSTRG.15884' => 'ama', 'MSTRG.16242' => 'ama', 'MSTRG.22285' => 'ama', 'MSTRG.22444' => 'ama', 'MSTRG.2349' => 'ama', 'MSTRG.26308' => 'ama', 'MSTRG.28296' => 'ama', 'MSTRG.9895' => 'ama', 'Nitab4.5_0000110g0060' => 'nta', 'Nitab4.5_0000420g0130' => 'nta', 'Nitab4.5_0000422g0030' => 'nta', 'Nitab4.5_0000560g0180' => 'nta', 'Nitab4.5_0000703g0100' => 'nta', 'Nitab4.5_0000786g0200' => 'nta', 'Nitab4.5_0001336g0020' => 'nta', 'Nitab4.5_0001796g0030' => 'nta', 'Nitab4.5_0003348g0060' => 'nta', 'Nitab4.5_0003698g0040' => 'nta', 'Nitab4.5_0003942g0090' => 'nta', 'Nitab4.5_0004775g0070' => 'nta', 'Nitab4.5_0004864g0030' => 'nta', 'Nitab4.5_0005615g0020' => 'nta', 'Nitab4.5_0009288g0030' => 'nta', 'Nitab4.5_0009341g0010' => 'nta', 'Nitab4.5_0009535g0010' => 'nta', 'Nn1g03995' => 'nnu', 'Nn1g04100' => 'nnu', 'Nn1g06530' => 'nnu', 'Nn3g16404' => 'nnu', 'Nn3g17212' => 'nnu', 'Nn3g20776' => 'nnu', 'Nn3g21923' => 'nnu', 'Nn5g27737' => 'nnu', 'Nn5g29461' => 'nnu', 'Nn7g38355' => 'nnu', 'Nn8g39873' => 'nnu', 'Oeu000548.2' => 'oeu', 'Oeu004672.1' => 'oeu', 'Oeu015605.2' => 'oeu', 'Oeu016092.1' => 'oeu', 'Oeu017879.3' => 'oeu', 'Oeu024910.1' => 'oeu', 'Oeu028965.1' => 'oeu', 'Oeu031269.1' => 'oeu', 'Oeu031270.1' => 'oeu', 'Oeu032535.1' => 'oeu', 'Oeu034151.1' => 'oeu', 'Oeu034152.1' => 'oeu', 'Oeu034588.2' => 'oeu', 'Oeu050846.1' => 'oeu', 'Oeu050849.2' => 'oeu', 'Oeu051063.2' => 'oeu', 'Oeu052368.1' => 'oeu', 'Oeu052370.1' => 'oeu', 'Os01g0210400' => 'osa', 'Os01g0304300' => 'osa', 'Os01g0749100' => 'osa', 'Os02g0745800' => 'osa', 'Os03g0769050' => 'osa', 'Os05g0531500' => 'osa', 'Os06g0724300' => 'osa', 'Os11g0198100' => 'osa', 'Peaxi162Scf00069g01425' => 'pax', 'Peaxi162Scf00280g00811' => 'pax', 'Peaxi162Scf00310g00615' => 'pax', 'Peaxi162Scf00362g00542' => 'pax', 'Peaxi162Scf00461g00310' => 'pax', 'Peaxi162Scf00530g00118' => 'pax', 'Peaxi162Scf00541g00057' => 'pax', 'Peaxi162Scf00661g00017' => 'pax', 'Peaxi162Scf00926g00027' => 'pax', 'Peaxi162Scf01064g00263' => 'pax', 'Peaxi162Scf01211g00135' => 'pax', 'PGR004G2336' => 'pgr', 'PGR042G0327' => 'pgr', 'PGR042G1957' => 'pgr', 'PGR042G2003' => 'pgr', 'PGR042G3929' => 'pgr', 'PGR083G1137' => 'pgr', 'PGR083G1364' => 'pgr', 'PGSC0003DMG400003381' => 'stu', 'PGSC0003DMG400003417' => 'stu', 'PGSC0003DMG400008981' => 'stu', 'PGSC0003DMG400012417' => 'stu', 'PGSC0003DMG400012823' => 'stu', 'PGSC0003DMG400016885' => 'stu', 'PGSC0003DMG400022812' => 'stu', 'PGSC0003DMG400029726' => 'stu', 'PGSC0003DMG401009243' => 'stu', 'PGSC0003DMG401031505' => 'stu', 'PGSC0003DMG402031505' => 'stu', 'Phvul.001G017600' => 'pvu', 'Phvul.002G193500' => 'pvu', 'Phvul.002G228900' => 'pvu', 'Phvul.002G236800' => 'pvu', 'Phvul.003G049500' => 'pvu', 'Phvul.005G072000' => 'pvu', 'Phvul.006G164800' => 'pvu', 'Phvul.006G185100' => 'pvu', 'Phvul.007G090000' => 'pvu', 'Potri.001G399800' => 'ptr', 'Potri.002G149900' => 'ptr', 'Potri.004G044100' => 'ptr', 'Potri.004G177600' => 'ptr', 'Potri.009G138000' => 'ptr', 'Potri.010G094000' => 'ptr', 'Potri.011G053000' => 'ptr', 'Potri.011G119300' => 'ptr', 'Potri.013G113700' => 'ptr', 'Potri.018G107800' => 'ptr', 'Potri.019G084100' => 'ptr', 'Pp3c14_23720' => 'ppa', 'Pp3c16_6340' => 'ppa', 'Pp3c23_13420' => 'ppa', 'Pp3c24_2740' => 'ppa', 'Pp3c25_860' => 'ppa', 'Pp3c8_21750' => 'ppa', 'Prupe.1G273000' => 'ppe', 'Prupe.1G273700' => 'ppe', 'Prupe.1G274100' => 'ppe', 'Prupe.2G023300' => 'ppe', 'Prupe.4G048000' => 'ppe', 'Prupe.4G080400' => 'ppe', 'Prupe.4G181200' => 'ppe', 'Prupe.8G056900' => 'ppe', 'Prupe.8G168700' => 'ppe', 'Psat1g189080' => 'psa', 'Psat1g204760' => 'psa', 'Psat4g175560' => 'psa', 'Psat4g177720' => 'psa', 'Psat5g244240' => 'psa', 'Psat6g010720' => 'psa', 'Psat6g187200' => 'psa', 'Psat7g072040' => 'psa', 'PSO017G3501' => 'pso', 'PSO063G2148' => 'pso', 'PSO063G5608' => 'pso', 'PSO210G6392' => 'pso', 'PSO541G2319' => 'pso', 'PSO541G2836' => 'pso', 'PSO541G4012' => 'pso', 'PSO541G6253' => 'pso', 'PSO675G0580' => 'pso', 'PSO675G0856' => 'pso', 'PSO675G5635' => 'pso', 'PSO675G9157' => 'pso', 'PSO832G1660' => 'pso', 'PSO832G1969' => 'pso', 'QL02p007186' => 'qlo', 'QL02p033904' => 'qlo', 'QL03p064391' => 'qlo', 'QL05p040593' => 'qlo', 'QL05p058242' => 'qlo', 'QL08p021825' => 'qlo', 'QL11p004981' => 'qlo', 'RcHm_v2.0_Chr1g0318301' => 'rch', 'RcHm_v2.0_Chr4g0418501' => 'rch', 'RcHm_v2.0_Chr4g0439971' => 'rch', 'RcHm_v2.0_Chr5g0008541' => 'rch', 'RcHm_v2.0_Chr5g0014101' => 'rch', 'RcHm_v2.0_Chr5g0014131' => 'rch', 'RcHm_v2.0_Chr5g0033621' => 'rch', 'RcHm_v2.0_Chr6g0272041' => 'rch', 'RcHm_v2.0_Chr6g0278831' => 'rch', 'Rhsim02G0130400' => 'rsi', 'Rhsim02G0171100' => 'rsi', 'Rhsim05G0053000' => 'rsi', 'Rhsim05G0053100' => 'rsi', 'Rhsim06G0096500' => 'rsi', 'Rhsim06G0096600' => 'rsi', 'Rhsim06G0199100' => 'rsi', 'Rhsim12G0062300' => 'rsi', 'Rhsim12G0062800' => 'rsi', 'Sabra02G0118600' => 'sbr', 'Sabra04G0027300' => 'sbr', 'Sabra04G0119500' => 'sbr', 'Sabra08G0112500' => 'sbr', 'Sabra11G0036800' => 'sbr', 'Sabra11G0103800' => 'sbr', 'Sabra13G0096300' => 'sbr', 'Sabra16G0262300' => 'sbr', 'Sabra18G0091700' => 'sbr', 'Sabra19G0095400' => 'sbr', 'SalBow6G3080' => 'sbo', 'SalBow7G1157' => 'sbo', 'SalBow7G2123' => 'sbo', 'SalBow7G2285' => 'sbo', 'SalBow7G3537' => 'sbo', 'SalBow8G2947' => 'sbo', 'SalBow8G4463' => 'sbo', 'SalBow8G5466' => 'sbo', 'Sc01g0001750' => 'sci', 'Sc02g0006640' => 'sci', 'Sc02g0006670' => 'sci', 'Sc04g0008220' => 'sci', 'Sc05g0006190' => 'sci', 'Sc08g0002760' => 'sci', 'Sc17g0006170' => 'sci', 'Sc22g0002050' => 'sci', 'Sc23g0001190' => 'sci', 'Sc24g0000980' => 'sci', 'Sed0006245' => 'sed', 'Sed0007543' => 'sed', 'Sed0009411' => 'sed', 'Sed0010765' => 'sed', 'Sed0012944' => 'sed', 'Sed0014682' => 'sed', 'Sed0016174' => 'sed', 'Sed0016796' => 'sed', 'Sed0020317' => 'sed', 'Sed0021467' => 'sed', 'SEGI_01316' => 'sgi', 'SEGI_03374' => 'sgi', 'SEGI_16265' => 'sgi', 'SEGI_18569' => 'sgi', 'SEGI_20351' => 'sgi', 'SEGI_26395' => 'sgi', 'SEGI_29469' => 'sgi', 'SEGI_34771' => 'sgi', 'SEGI_36769' => 'sgi', 'SEGI_37139' => 'sgi', 'SGA_v2.0_scaffold100G29687' => 'sas', 'SGA_v2.0_scaffold118G32472' => 'sas', 'SGA_v2.0_scaffold14G07051' => 'sas', 'SGA_v2.0_scaffold183G39845' => 'sas', 'SGA_v2.0_scaffold1G00174' => 'sas', 'SGA_v2.0_scaffold22G09714' => 'sas', 'SGA_v2.0_scaffold333G48992' => 'sas', 'SGA_v2.0_scaffold46G17491' => 'sas', 'SGA_v2.0_scaffold49G18294' => 'sas', 'SGA_v2.0_scaffold63G21658' => 'sas', 'SHI01741' => 'shi', 'SHI05771' => 'shi', 'SHI18077' => 'shi', 'SHI20525' => 'shi', 'SHI20527' => 'shi', 'SHI20528' => 'shi', 'SMO172G0185' => 'smo', 'SMO198G0020' => 'smo', 'SMO351G0006' => 'smo', 'SMO356G0118' => 'smo', 'SMO358G0296' => 'smo', 'SMO367G0079' => 'smo', 'SMO367G1277' => 'smo', 'Solyc01g014220.3' => 'sly', 'Solyc01g111770.2' => 'sly', 'Solyc02g078180.3' => 'sly', 'Solyc03g006430.3' => 'sly', 'Solyc03g006456.1' => 'sly', 'Solyc03g079860.2' => 'sly', 'Solyc04g079770.3' => 'sly', 'Solyc05g007430.4' => 'sly', 'Solyc07g063150.3' => 'sly', 'Solyc08g016620.3' => 'sly', 'Solyc09g057590.3' => 'sly', 'Solyc09g057600.1' => 'sly', 'Solyc10g009050.3' => 'sly', 'Solyc11g017420.2' => 'sly', 'Sopen01g053810' => 'spe', 'Sopen02g023040' => 'spe', 'Sopen03g002440' => 'spe', 'Sopen04g033350' => 'spe', 'Sopen05g003310' => 'spe', 'Sopen07g004050' => 'spe', 'Sopen07g031340' => 'spe', 'Sopen08g006990' => 'spe', 'Sopen10g004830' => 'spe', 'Sopen11g009370' => 'spe', 'Sp1g24450' => 'spa', 'Sp1g29670' => 'spa', 'Sp1g39600' => 'spa', 'Sp2g11080' => 'spa', 'Sp2g13970' => 'spa', 'Sp4g16130' => 'spa', 'Sp6g13080' => 'spa', 'Sp7g37270' => 'spa', 'TAR371G0065' => 'tar', 'TAR376G0340' => 'tar', 'TAR376G0435' => 'tar', 'TAR381G0002' => 'tar', 'TAR381G1236' => 'tar', 'TAR624G0055' => 'tar', 'TAR624G0324' => 'tar', 'TAR624G0696' => 'tar', 'TAR624G0906' => 'tar', 'TAR625G0107' => 'tar', 'TAR626G0015' => 'tar', 'TAR626G1356' => 'tar', 'TAR627G0888' => 'tar', 'TAR628G0399' => 'tar', 'TAR628G1327' => 'tar', 'TAR629G2831' => 'tar', 'TAR629G2874' => 'tar', 'TAR633G1432' => 'tar', 'TAR633G2771' => 'tar', 'THA.LOC104803394' => 'tha', 'THA.LOC104805153' => 'tha', 'THA.LOC104806784' => 'tha', 'THA.LOC104810473' => 'tha', 'THA.LOC104813100' => 'tha', 'THA.LOC104814215' => 'tha', 'THA.LOC104815554' => 'tha', 'THA.LOC104820544' => 'tha', 'THA.LOC104824754' => 'tha', 'THA.LOC104827717' => 'tha', 'Thecc.02G031400' => 'tca', 'Thecc.02G055900' => 'tca', 'Thecc.02G350800' => 'tca', 'Thecc.06G150900' => 'tca', 'Thecc.06G186600' => 'tca', 'Thecc.07G089600' => 'tca', 'Thecc.08G020400' => 'tca', 'Thecc.08G182100' => 'tca', 'Thhalv10000873m.g' => 'esa', 'Thhalv10004185m.g' => 'esa', 'Thhalv10006981m.g' => 'esa', 'Thhalv10007204m.g' => 'esa', 'Thhalv10011374m.g' => 'esa', 'Thhalv10013482m.g' => 'esa', 'Thhalv10017801m.g' => 'esa', 'Thhalv10024983m.g' => 'esa', 'TPR.G12072' => 'tpr', 'TPR.G15769' => 'tpr', 'TPR.G16504' => 'tpr', 'TPR.G16506' => 'tpr', 'TPR.G24345' => 'tpr', 'TPR.G26666' => 'tpr', 'TPR.G27320' => 'tpr', 'TPR.G31819' => 'tpr', 'TPR.G38879' => 'tpr', 'TPR.G39015' => 'tpr', 'TPR.G8819' => 'tpr', 'TWI09G0924' => 'twi', 'TWI12G0811' => 'twi', 'TWI12G1294' => 'twi', 'TWI31G0150' => 'twi', 'TWI36G1262' => 'twi', 'TWI38G1287' => 'twi', 'TWI38G1633' => 'twi', 'TWI38G1982' => 'twi', 'TWI39G0116' => 'twi', 'TWI60G1011' => 'twi', 'TWI63G0171' => 'twi', 'TWI73G0839' => 'twi', 'TWI79G1511' => 'twi', 'unitig_0.g915' => 'ugi', 'unitig_0.g916' => 'ugi', 'unitig_21.g20219' => 'ugi', 'unitig_21.g20416' => 'ugi', 'unitig_578.g16132' => 'ugi', 'unitig_578.g16718' => 'ugi', 'unitig_62.g23481' => 'ugi', 'unitig_744.g24535' => 'ugi', 'unitig_749.g13525' => 'ugi', 'vmacro01248' => 'vma', 'vmacro02290' => 'vma', 'vmacro10946' => 'vma', 'vmacro11865' => 'vma', 'vmacro12493' => 'vma', 'vmacro17322' => 'vma', 'vmacro21599' => 'vma', 'vmacro23041' => 'vma', 'VMungo0251G0004' => 'vmu', 'VMungo0251G2639' => 'vmu', 'VMungo0251G2967' => 'vmu', 'VMungo0540G0864' => 'vmu', 'VMungo0540G1569' => 'vmu', 'VMungo0647G0317' => 'vmu', 'VMungo0720G1373' => 'vmu', 'VMungo0720G1508' => 'vmu', 'VMungo1080G0485' => 'vmu', 'VMungo1215G3177' => 'vmu', 'Zm00001eb112600' => 'zma', 'Zm00001eb120220' => 'zma', 'Zm00001eb153240' => 'zma', 'Zm00001eb168880' => 'zma', 'Zm00001eb213920' => 'zma', 'Zm00001eb228280' => 'zma', 'Zm00001eb254580' => 'zma', 'Zm00001eb272180' => 'zma', 'Zm00001eb293190' => 'zma', 'Zm00001eb322930' => 'zma', 'Zm00001eb353360' => 'zma', 'Zm00001eb353390' => 'zma', 'Zm00001eb353430' => 'zma', 'Zm00001eb353440' => 'zma', 'Zm00001eb353780' => 'zma' ), 'gf_id' => 'HOM05D000499', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000499' ), 'data_identifier' => 'HOM05D000499', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000499', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1066', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p29780' => 'bna', 'A02p33180' => 'bna', 'A03p16470' => 'bna', 'A03p66010' => 'bna', 'A04p25970' => 'bna', 'A06p01270' => 'bna', 'A06p46080' => 'bna', 'A07p11400' => 'bna', 'A08p01840' => 'bna', 'A08p08230' => 'bna', 'A08p25740' => 'bna', 'A09p32070' => 'bna', 'A09p37830' => 'bna', 'A09p42840' => 'bna', 'A09p42850' => 'bna', 'Aa31LG10G2060' => 'aar', 'Aa31LG2G7410' => 'aar', 'Aa31LG6G10200' => 'aar', 'Aa31LG6G16680' => 'aar', 'Aa31LG6G8470' => 'aar', 'Aa31LG9G12730' => 'aar', 'Aa31LG9G13680' => 'aar', 'Aa31LG9G14920' => 'aar', 'Aa31LG9G6650' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4977' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5467' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3254' => 'aag', 'Actinidia02578' => 'ach', 'Actinidia07693' => 'ach', 'Actinidia08413' => 'ach', 'Actinidia08414' => 'ach', 'Actinidia15289' => 'ach', 'Actinidia19871' => 'ach', 'Actinidia21475' => 'ach', 'Actinidia22576' => 'ach', 'Actinidia28327' => 'ach', 'Actinidia32491' => 'ach', 'Actinidia39463' => 'ach', 'Actinidia39571' => 'ach', 'Ah.01g013750' => 'amhyb', 'Ah.01g023210' => 'amhyb', 'Ah.04g164850' => 'amhyb', 'Ah.05g178060' => 'amhyb', 'Ah.07g204270' => 'amhyb', 'Ah.07g208480' => 'amhyb', 'Ah.09g237410' => 'amhyb', 'Ah.14g089460' => 'amhyb', 'AL1G41790' => 'aly', 'AL1G49050' => 'aly', 'AL1G53810' => 'aly', 'AL1G61400' => 'aly', 'AL4G18580' => 'aly', 'AL5G12510' => 'aly', 'AL5G12540' => 'aly', 'AL6G43230' => 'aly', 'AL7G10370' => 'aly', 'AL7G19250' => 'aly', 'AL8G12240' => 'aly', 'AL8G18540' => 'aly', 'Aqoxy1G02409' => 'aox', 'Aqoxy2G03993' => 'aox', 'Aqoxy3G03357' => 'aox', 'Aqoxy4G00785' => 'aox', 'Aqoxy5G02598' => 'aox', 'Aqoxy6G00132' => 'aox', 'Aqoxy7G01776' => 'aox', 'Aqoxy7G02316' => 'aox', 'Aqoxy7G03973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.12AFKW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B8730' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27IQR1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3F75VG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3RE0GA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41TCQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.527VTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FIR39' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5W8UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DA38EV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ63HS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H1I32C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HC27T5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4M8AP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7N3CZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9UVDZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LS1NQA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT1D4B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SKC4TM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCFV76' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF9Q1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQWD9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1ZM88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WE07RT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YCK7VH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJE6Q6' => 'arhy', 'AT1G28240' => 'ath', 'AT1G34550' => 'ath', 'AT1G53040' => 'ath', 'AT2G02910' => 'ath', 'AT4G09630' => 'ath', 'AT4G38500' => 'ath', 'AT5G42660' => 'ath', 'AT5G46220' => 'ath', 'ATR0152G026' => 'atr', 'ATR0564G343' => 'atr', 'ATR0706G151' => 'atr', 'ATR0733G207' => 'atr', 'ATR0751G234' => 'atr', 'ATR0807G048' => 'atr', 'ATR1091G084' => 'atr', 'Atru.chr10.1229' => 'acertr', 'Atru.chr10.1230' => 'acertr', 'Atru.chr10.1874' => 'acertr', 'Atru.chr11.1808' => 'acertr', 'Atru.chr13.1795' => 'acertr', 'Atru.chr13.570' => 'acertr', 'Atru.chr2.2608' => 'acertr', 'Atru.chr2.2609' => 'acertr', 'Atru.chr5.3428' => 'acertr', 'Atru.chr8.1171' => 'acertr', 'AUR62004651' => 'cqu', 'AUR62008675' => 'cqu', 'AUR62010014' => 'cqu', 'AUR62013004' => 'cqu', 'AUR62014825' => 'cqu', 'AUR62015015' => 'cqu', 'AUR62015151' => 'cqu', 'AUR62017020' => 'cqu', 'AUR62019422' => 'cqu', 'AUR62023570' => 'cqu', 'AUR62025571' => 'cqu', 'AUR62029098' => 'cqu', 'AUR62033863' => 'cqu', 'AUR62034296' => 'cqu', 'AUR62040075' => 'cqu', 'BcaB02g07334' => 'bca', 'BcaB02g10575' => 'bca', 'BcaB03g12119' => 'bca', 'BcaB03g12120' => 'bca', 'BcaB03g13945' => 'bca', 'BcaB04g17123' => 'bca', 'BcaB04g17867' => 'bca', 'BcaB04g19839' => 'bca', 'BcaB07g30317' => 'bca', 'BcaB07g32432' => 'bca', 'BcaB07g33362' => 'bca', 'BcaB08g36611' => 'bca', 'BcaC01g00028' => 'bca', 'BcaC01g01356' => 'bca', 'BcaC01g02034' => 'bca', 'BcaC01g06051' => 'bca', 'BcaC03g16839' => 'bca', 'BcaC03g17176' => 'bca', 'BcaC05g26829' => 'bca', 'BcaC06g31490' => 'bca', 'BcaC06g35344' => 'bca', 'BcaC06g36570' => 'bca', 'BcaC07g37537' => 'bca', 'BcaC08g43491' => 'bca', 'BcaC08g43773' => 'bca', 'BcaNung00234' => 'bca', 'BcaNung01982' => 'bca', 'BcaNung03707' => 'bca', 'BcaNung06454' => 'bca', 'BolC2t10762H' => 'bol', 'BolC2t11191H' => 'bol', 'BolC3t14322H' => 'bol', 'BolC3t19747H' => 'bol', 'BolC3t21425H' => 'bol', 'BolC4t27800H' => 'bol', 'BolC5t31423H' => 'bol', 'BolC6t35951H' => 'bol', 'BolC6t36282H' => 'bol', 'BolC7t40678H' => 'bol', 'BolC7t40679H' => 'bol', 'BolC7t42222H' => 'bol', 'BolC7t43492H' => 'bol', 'BolC7t46785H' => 'bol', 'BolC8t47853H' => 'bol', 'BolC9t56805H' => 'bol', 'BraA02t08000Z' => 'bra', 'BraA02t08341Z' => 'bra', 'BraA03t10936Z' => 'bra', 'BraA03t15657Z' => 'bra', 'BraA04t18100Z' => 'bra', 'BraA05t20523Z' => 'bra', 'BraA06t23353Z' => 'bra', 'BraA06t27473Z' => 'bra', 'BraA06t27769Z' => 'bra', 'BraA07t28928Z' => 'bra', 'BraA08t32236Z' => 'bra', 'BraA08t32841Z' => 'bra', 'BraA08t34524Z' => 'bra', 'BraA09t38742Z' => 'bra', 'BraA09t39295Z' => 'bra', 'C02p47180' => 'bna', 'C02p50990' => 'bna', 'C03p19360' => 'bna', 'C03p74950' => 'bna', 'C03p91000' => 'bna', 'C04p63260' => 'bna', 'C05p27050' => 'bna', 'C06p08750' => 'bna', 'C06p11490' => 'bna', 'C07p02820' => 'bna', 'C07p17180' => 'bna', 'C07p29440' => 'bna', 'C07p63730' => 'bna', 'C09p39260' => 'bna', 'CAN.G1164.34' => 'can', 'CAN.G1164.39' => 'can', 'CAN.G1530.3' => 'can', 'CAN.G162.61' => 'can', 'CAN.G176.6' => 'can', 'CAN.G289.49' => 'can', 'CAN.G370.21' => 'can', 'CAN.G370.22' => 'can', 'CAN.G371.117' => 'can', 'CAN.G58.37' => 'can', 'CAN.G588.98' => 'can', 'CANSAT21G2266' => 'cansat', 'CANSAT25G2799' => 'cansat', 'CANSAT35G0862' => 'cansat', 'CANSAT35G1704' => 'cansat', 'CANSAT35G1760' => 'cansat', 'CANSAT56G3971' => 'cansat', 'CANSAT56G4116' => 'cansat', 'CANSAT80G1259' => 'cansat', 'CARHR027730' => 'chi', 'CARHR033880' => 'chi', 'CARHR043270' => 'chi', 'CARHR145330' => 'chi', 'CARHR145340' => 'chi', 'CARHR175570' => 'chi', 'CARHR181570' => 'chi', 'CARHR258470' => 'chi', 'CARHR260490' => 'chi', 'CARHR294220' => 'chi', 'Carub.0001s2668' => 'cru', 'Carub.0001s3257' => 'cru', 'Carub.0001s4220' => 'cru', 'Carub.0005s0179' => 'cru', 'Carub.0006s2807' => 'cru', 'Carub.0007s0039' => 'cru', 'Carub.0008s0169' => 'cru', 'Carub.0008s0636' => 'cru', 'Ca_00338_v3' => 'car', 'Ca_00542_v3' => 'car', 'Ca_01844_v3' => 'car', 'Ca_10611_v3' => 'car', 'Ca_13326_v3' => 'car', 'Ca_17944_v3' => 'car', 'Ca_18546_v3' => 'car', 'Ca_24219_v3' => 'car', 'Ca_29972_v3' => 'car', 'CBR_g3681' => 'cbr', 'CBR_g40021' => 'cbr', 'Cc01_g08140' => 'ccan', 'Cc02_g13410' => 'ccan', 'Cc02_g37480' => 'ccan', 'Cc05_g12030' => 'ccan', 'Cc09_g03370' => 'ccan', 'Cc09_g10300' => 'ccan', 'Cc10_g03530' => 'ccan', 'Cc10_g11380' => 'ccan', 'CDE01G0176' => 'cde', 'CDE02G0675' => 'cde', 'CDE02G0942' => 'cde', 'CDE02G1153' => 'cde', 'CDE02G4177' => 'cde', 'CDE04G2117' => 'cde', 'CDE04G2736' => 'cde', 'CDE08G1161' => 'cde', 'CDE09G1238' => 'cde', 'Cfa000467' => 'cfa', 'Cfa000947' => 'cfa', 'Cfa004969' => 'cfa', 'Cfa005284' => 'cfa', 'Cfa008993' => 'cfa', 'Cfa018187' => 'cfa', 'Cfa018454' => 'cfa', 'Cfa020585' => 'cfa', 'Ciclev10000424m.g' => 'ccl', 'Ciclev10003605m.g' => 'ccl', 'Ciclev10007828m.g' => 'ccl', 'Ciclev10014620m.g' => 'ccl', 'Ciclev10015169m.g' => 'ccl', 'Ciclev10018291m.g' => 'ccl', 'Ciclev10028256m.g' => 'ccl', 'Ciclev10033822m.g' => 'ccl', 'CiPaw.05G060300' => 'cil', 'CiPaw.05G085000' => 'cil', 'CiPaw.06G083700' => 'cil', 'CiPaw.06G120300' => 'cil', 'CiPaw.09G060500' => 'cil', 'CiPaw.09G123800' => 'cil', 'CiPaw.11G169700' => 'cil', 'CiPaw.12G118300' => 'cil', 'CiPaw.15G071000' => 'cil', 'CiPaw.15G081900' => 'cil', 'ClCG01G024610' => 'cla', 'ClCG03G006070' => 'cla', 'ClCG05G019250' => 'cla', 'ClCG09G009500' => 'cla', 'ClCG11G008200' => 'cla', 'ClCG11G018080' => 'cla', 'COL.COLO4_17373' => 'col', 'COL.COLO4_22994' => 'col', 'COL.COLO4_26389' => 'col', 'COL.COLO4_27170' => 'col', 'COL.COLO4_31074' => 'col', 'COL.COLO4_31465' => 'col', 'COL.COLO4_36438' => 'col', 'COL.COLO4_36439' => 'col', 'Cpa.g.c38781' => 'cpa', 'Cpa.g.sc128.12' => 'cpa', 'Cpa.g.sc166.7' => 'cpa', 'Cpa.g.sc166.8' => 'cpa', 'Cpa.g.sc20.111' => 'cpa', 'Cpa.g.sc27.31' => 'cpa', 'Cpa.g.sc64.36' => 'cpa', 'Cpa.g.sc64.37' => 'cpa', 'Cpa.g.sc66.49' => 'cpa', 'Cpa.g.sc80.64' => 'cpa', 'CsaV3_1G012320' => 'csa', 'CsaV3_2G008480' => 'csa', 'CsaV3_2G033450' => 'csa', 'CsaV3_3G044830' => 'csa', 'CsaV3_4G033710' => 'csa', 'CsaV3_6G051730' => 'csa', 'CsaV3_7G025350' => 'csa', 'CSS0001067' => 'camsi', 'CSS0005996' => 'camsi', 'CSS0006590' => 'camsi', 'CSS0009673' => 'camsi', 'CSS0010201' => 'camsi', 'CSS0010549' => 'camsi', 'CSS0011364' => 'camsi', 'CSS0014473' => 'camsi', 'CSS0014961' => 'camsi', 'CSS0020191' => 'camsi', 'CSS0021165' => 'camsi', 'CSS0022306' => 'camsi', 'CSS0030591' => 'camsi', 'CSS0030696' => 'camsi', 'CSS0032653' => 'camsi', 'CSS0037487' => 'camsi', 'CSS0041102' => 'camsi', 'CSS0041261' => 'camsi', 'CSS0046246' => 'camsi', 'CSS0049256' => 'camsi', 'DCAR_004075' => 'dca', 'DCAR_011538' => 'dca', 'DCAR_019553' => 'dca', 'DCAR_020952' => 'dca', 'DCAR_021739' => 'dca', 'DCAR_027407' => 'dca', 'DCAR_027913' => 'dca', 'DCAR_028066' => 'dca', 'Dinv05899' => 'din', 'Dinv07563' => 'din', 'Dinv08010' => 'din', 'Dinv14125' => 'din', 'Dinv20172' => 'din', 'Dinv30743' => 'din', 'Dinv31229' => 'din', 'Dinv34162' => 'din', 'Dinv36028' => 'din', 'Dinv39368' => 'din', 'Dinv40565' => 'din', 'Dinv41706' => 'din', 'Duzib052G0089' => 'dzi', 'Duzib116G0641' => 'dzi', 'Duzib132G0069' => 'dzi', 'Duzib132G1219' => 'dzi', 'Duzib147G0278' => 'dzi', 'Duzib160G0480' => 'dzi', 'Duzib170G0661' => 'dzi', 'Duzib177G0591' => 'dzi', 'Duzib187G1353' => 'dzi', 'Duzib192G0858' => 'dzi', 'Duzib192G0883' => 'dzi', 'Duzib213G0506' => 'dzi', 'Duzib235G0289' => 'dzi', 'Duzib251G0422' => 'dzi', 'ECA232G3898' => 'eca', 'ECA233G5950' => 'eca', 'ECA234G1699' => 'eca', 'ECA234G2421' => 'eca', 'ECA236G0426' => 'eca', 'ECA236G4331' => 'eca', 'ECA248G2573' => 'eca', 'EL10Ac1g00077' => 'bvu', 'EL10Ac1g01746' => 'bvu', 'EL10Ac2g03464' => 'bvu', 'EL10Ac4g08176' => 'bvu', 'EL10Ac7g17521' => 'bvu', 'EL10Ac8g20386' => 'bvu', 'EL10Ac9g21343' => 'bvu', 'EL10Ac9g22688' => 'bvu', 'Eucgr.B03434' => 'egr', 'Eucgr.D00618' => 'egr', 'Eucgr.E02395' => 'egr', 'Eucgr.F01129' => 'egr', 'Eucgr.F02622' => 'egr', 'Eucgr.F04207' => 'egr', 'FAN01G0570' => 'fan', 'FAN03G3351' => 'fan', 'FAN06G3702' => 'fan', 'FAN07G2149' => 'fan', 'FAN10G3758' => 'fan', 'FAN11G1170' => 'fan', 'FAN11G2050' => 'fan', 'FAN11G2724' => 'fan', 'FAN12G1700' => 'fan', 'FAN12G2028' => 'fan', 'FAN15G1160' => 'fan', 'FAN15G3063' => 'fan', 'FAN16G2540' => 'fan', 'FAN16G3077' => 'fan', 'FAN16G3624' => 'fan', 'FAN17G0221' => 'fan', 'FAN20G2492' => 'fan', 'FAN20G2905' => 'fan', 'FAN21G0548' => 'fan', 'FAN21G1300' => 'fan', 'FAN22G0077' => 'fan', 'FAN22G1315' => 'fan', 'FAN24G1280' => 'fan', 'FAN24G1445' => 'fan', 'FAN24G3527' => 'fan', 'FAN25G0464' => 'fan', 'FAN25G2885' => 'fan', 'FAN25G3270' => 'fan', 'FAN27G1101' => 'fan', 'FAN27G2846' => 'fan', 'FAN27G3524' => 'fan', 'FvH4_2g11770' => 'fve', 'FvH4_2g15630' => 'fve', 'FvH4_3g05570' => 'fve', 'FvH4_3g09110' => 'fve', 'FvH4_3g19940' => 'fve', 'FvH4_4g04821' => 'fve', 'FvH4_4g31480' => 'fve', 'FvH4_7g01740' => 'fve', 'Glyma.05G130400' => 'gma', 'Glyma.05G156400' => 'gma', 'Glyma.07G197000' => 'gma', 'Glyma.08G085151' => 'gma', 'Glyma.08G114500' => 'gma', 'Glyma.08G300400' => 'gma', 'Glyma.10G215800' => 'gma', 'Glyma.12G224400' => 'gma', 'Glyma.13G179300' => 'gma', 'Glyma.13G218151' => 'gma', 'Glyma.13G238800' => 'gma', 'Glyma.13G276900' => 'gma', 'Glyma.14G078200' => 'gma', 'Glyma.15G074500' => 'gma', 'Glyma.15G094100' => 'gma', 'Glyma.17G247200' => 'gma', 'Glyma.18G120100' => 'gma', 'Glyma.20G176000' => 'gma', 'Gohir.A01G063600' => 'ghi', 'Gohir.A01G170301' => 'ghi', 'Gohir.A02G060500' => 'ghi', 'Gohir.A05G133850' => 'ghi', 'Gohir.A05G161400' => 'ghi', 'Gohir.A06G012900' => 'ghi', 'Gohir.A06G035901' => 'ghi', 'Gohir.A06G127100' => 'ghi', 'Gohir.A06G210500' => 'ghi', 'Gohir.A08G008650' => 'ghi', 'Gohir.A09G072700' => 'ghi', 'Gohir.A09G088301' => 'ghi', 'Gohir.A10G040600' => 'ghi', 'Gohir.A12G036300' => 'ghi', 'Gohir.A12G143350' => 'ghi', 'Gohir.A12G165500' => 'ghi', 'Gohir.A13G145700' => 'ghi', 'Gohir.D01G050000' => 'ghi', 'Gohir.D01G051366' => 'ghi', 'Gohir.D01G161350' => 'ghi', 'Gohir.D02G065900' => 'ghi', 'Gohir.D05G164200' => 'ghi', 'Gohir.D05G355500' => 'ghi', 'Gohir.D06G010400' => 'ghi', 'Gohir.D06G111250' => 'ghi', 'Gohir.D06G132000' => 'ghi', 'Gohir.D06G210500' => 'ghi', 'Gohir.D07G165675' => 'ghi', 'Gohir.D08G062240' => 'ghi', 'Gohir.D08G086101' => 'ghi', 'Gohir.D08G138060' => 'ghi', 'Gohir.D09G072300' => 'ghi', 'Gohir.D10G041400' => 'ghi', 'Gohir.D11G191020' => 'ghi', 'Gohir.D11G212066' => 'ghi', 'Gohir.D12G036300' => 'ghi', 'Gohir.D12G168600' => 'ghi', 'Gohir.D13G150600' => 'ghi', 'Gorai.001G057300' => 'gra', 'Gorai.002G069900' => 'gra', 'Gorai.002G200000' => 'gra', 'Gorai.003G067600' => 'gra', 'Gorai.005G074800' => 'gra', 'Gorai.006G087300' => 'gra', 'Gorai.008G037500' => 'gra', 'Gorai.008G181400' => 'gra', 'Gorai.009G169400' => 'gra', 'Gorai.009G387900' => 'gra', 'Gorai.010G013300' => 'gra', 'Gorai.010G153800' => 'gra', 'Gorai.010G255800' => 'gra', 'Gorai.011G043700' => 'gra', 'Gorai.011G198900' => 'gra', 'Gorai.013G168400' => 'gra', 'GSVIVG01005212001' => 'vvi', 'GSVIVG01006163001' => 'vvi', 'GSVIVG01009625001' => 'vvi', 'GSVIVG01014338001' => 'vvi', 'GSVIVG01020005001' => 'vvi', 'GSVIVG01021450001' => 'vvi', 'GSVIVG01023975001' => 'vvi', 'GSVIVG01034490001' => 'vvi', 'HanXRQChr04g0112071' => 'han', 'HanXRQChr05g0131151' => 'han', 'HanXRQChr09g0262371' => 'han', 'HanXRQChr09g0268401' => 'han', 'HanXRQChr10g0279241' => 'han', 'HanXRQChr10g0297961' => 'han', 'HanXRQChr11g0326231' => 'han', 'HanXRQChr11g0328471' => 'han', 'HanXRQChr16g0507941' => 'han', 'HanXRQChr17g0560211' => 'han', 'Haze_02108' => 'cav', 'Haze_02428' => 'cav', 'Haze_05593' => 'cav', 'Haze_06448' => 'cav', 'Haze_09427' => 'cav', 'Haze_12022' => 'cav', 'Haze_17612' => 'cav', 'Haze_17928' => 'cav', 'Hma1.2p1_0032F.1_g019250' => 'hma', 'Hma1.2p1_0163F.1_g072690' => 'hma', 'Hma1.2p1_0265F.1_g106710' => 'hma', 'Hma1.2p1_0286F.1_g113970' => 'hma', 'Hma1.2p1_0363F.1_g136640' => 'hma', 'Hma1.2p1_0584F.1_g183470' => 'hma', 'Hma1.2p1_0885F.1_g232570' => 'hma', 'HPP92_006022' => 'vpl', 'HPP92_007320' => 'vpl', 'HPP92_011521' => 'vpl', 'HPP92_019387' => 'vpl', 'HPP92_024038' => 'vpl', 'Hund05891' => 'sun', 'Hund06450' => 'sun', 'Hund12053' => 'sun', 'Hund16800' => 'sun', 'Hund21222' => 'sun', 'Hund22896' => 'sun', 'Hund23746' => 'sun', 'Hund27083' => 'sun', 'Lalb_Chr02g0141831' => 'lal', 'Lalb_Chr02g0141841' => 'lal', 'Lalb_Chr05g0220411' => 'lal', 'Lalb_Chr06g0162081' => 'lal', 'Lalb_Chr09g0327651' => 'lal', 'Lalb_Chr13g0295051' => 'lal', 'Lalb_Chr15g0086801' => 'lal', 'Lalb_Chr16g0383781' => 'lal', 'Lalb_Chr16g0383791' => 'lal', 'Lalb_Chr18g0055441' => 'lal', 'Lalb_Chr18g0059611' => 'lal', 'Lalb_Chr20g0109661' => 'lal', 'Lalb_Chr20g0109831' => 'lal', 'Lalb_Chr20g0121871' => 'lal', 'Lalb_Chr22g0355361' => 'lal', 'Lalb_Chr25g0286371' => 'lal', 'Lj1A1187G43' => 'lonja', 'Lj1A1205T50' => 'lonja', 'Lj1A800G33' => 'lonja', 'Lj1C1187T7' => 'lonja', 'Lj1C843T11' => 'lonja', 'Lj1g0010940' => 'lja', 'Lj2A288T69' => 'lonja', 'Lj3g0024276' => 'lja', 'Lj4A47T76' => 'lonja', 'Lj4g0005805' => 'lja', 'Lj4g0006097' => 'lja', 'Lj4g0008528' => 'lja', 'Lj4g0024907' => 'lja', 'Lj5g0012472' => 'lja', 'Lj5g0018648' => 'lja', 'Lj6C789G1' => 'lonja', 'Lj6g0004000' => 'lja', 'Lj7A292G67' => 'lonja', 'Lj7A292T64' => 'lonja', 'Lj9A400T58' => 'lonja', 'Lsat_1_v5_gn_1_126181' => 'lsa', 'Lsat_1_v5_gn_4_123041' => 'lsa', 'Lsat_1_v5_gn_4_133620' => 'lsa', 'Lsat_1_v5_gn_4_53221' => 'lsa', 'Lsat_1_v5_gn_4_71961' => 'lsa', 'Lsat_1_v5_gn_7_105241' => 'lsa', 'Lsat_1_v5_gn_7_21361' => 'lsa', 'Lsat_1_v5_gn_7_28860' => 'lsa', 'Lsat_1_v5_gn_7_31260' => 'lsa', 'Lsat_1_v5_gn_8_52801' => 'lsa', 'Manes.02G191400' => 'mes', 'Manes.03G110100' => 'mes', 'Manes.04G071100' => 'mes', 'Manes.05G100500' => 'mes', 'Manes.05G164700' => 'mes', 'Manes.15G087000' => 'mes', 'Manes.15G121500' => 'mes', 'Manes.16G028300' => 'mes', 'Manes.17G046100' => 'mes', 'Manes.17G069800' => 'mes', 'Manes.18G100500' => 'mes', 'Mapoly0002s0109' => 'mpo', 'Mapoly0024s0007' => 'mpo', 'Mapoly0089s0032' => 'mpo', 'MBI04_g42241_MAGBIO' => 'mbi', 'MBI05_g11988_MAGBIO' => 'mbi', 'MBI05_g35452_MAGBIO' => 'mbi', 'MBI07_g30179_MAGBIO' => 'mbi', 'MBI07_g35859_MAGBIO' => 'mbi', 'MBI07_g35860_MAGBIO' => 'mbi', 'MBI07_g37166_MAGBIO' => 'mbi', 'MBI08_g18172_MAGBIO' => 'mbi', 'MBI09_g08441_MAGBIO' => 'mbi', 'MBI13_g01676_MAGBIO' => 'mbi', 'MBI14_g42955_MAGBIO' => 'mbi', 'MBI16_g13161_MAGBIO' => 'mbi', 'MBI17_g27204_MAGBIO' => 'mbi', 'MBI19_g21595_MAGBIO' => 'mbi', 'MD00G1148400' => 'mdo', 'MD02G1301200' => 'mdo', 'MD03G1227800' => 'mdo', 'MD05G1041100' => 'mdo', 'MD05G1124800' => 'mdo', 'MD05G1284000' => 'mdo', 'MD05G1338800' => 'mdo', 'MD05G1338900' => 'mdo', 'MD07G1022800' => 'mdo', 'MD10G1047500' => 'mdo', 'MD10G1127500' => 'mdo', 'MD10G1262300' => 'mdo', 'MD10G1293800' => 'mdo', 'MD16G1074300' => 'mdo', 'Medtr1g021670' => 'mtr', 'Medtr1g096320' => 'mtr', 'Medtr2g013690' => 'mtr', 'Medtr2g019450' => 'mtr', 'Medtr2g085170' => 'mtr', 'Medtr4g088785' => 'mtr', 'Medtr8g055930' => 'mtr', 'Medtr8g085850' => 'mtr', 'MELO3C002605.2' => 'cme', 'MELO3C003891.2' => 'cme', 'MELO3C004012.2' => 'cme', 'MELO3C007134.2' => 'cme', 'MELO3C008118.2' => 'cme', 'MELO3C016700.2' => 'cme', 'MELO3C024127.2' => 'cme', 'MELO3C033361.2' => 'cme', 'MELO3C033362.2' => 'cme', 'Migut.C00430' => 'egut', 'Migut.C01246' => 'egut', 'Migut.E00101' => 'egut', 'Migut.H01486' => 'egut', 'Migut.H01939' => 'egut', 'Migut.K00360' => 'egut', 'Migut.M00910' => 'egut', 'Migut.M01139' => 'egut', 'Migut.N02677' => 'egut', 'MSTRG.13252' => 'ama', 'MSTRG.14701' => 'ama', 'MSTRG.1521' => 'ama', 'MSTRG.15884' => 'ama', 'MSTRG.16242' => 'ama', 'MSTRG.22285' => 'ama', 'MSTRG.22444' => 'ama', 'MSTRG.2349' => 'ama', 'MSTRG.26308' => 'ama', 'MSTRG.28296' => 'ama', 'MSTRG.9895' => 'ama', 'Nitab4.5_0000110g0060' => 'nta', 'Nitab4.5_0000420g0130' => 'nta', 'Nitab4.5_0000422g0030' => 'nta', 'Nitab4.5_0000560g0180' => 'nta', 'Nitab4.5_0000703g0100' => 'nta', 'Nitab4.5_0000786g0200' => 'nta', 'Nitab4.5_0001336g0020' => 'nta', 'Nitab4.5_0001796g0030' => 'nta', 'Nitab4.5_0003348g0060' => 'nta', 'Nitab4.5_0003698g0040' => 'nta', 'Nitab4.5_0003942g0090' => 'nta', 'Nitab4.5_0004775g0070' => 'nta', 'Nitab4.5_0004864g0030' => 'nta', 'Nitab4.5_0005615g0020' => 'nta', 'Nitab4.5_0009288g0030' => 'nta', 'Nitab4.5_0009341g0010' => 'nta', 'Nitab4.5_0009535g0010' => 'nta', 'Nn1g03995' => 'nnu', 'Nn1g04100' => 'nnu', 'Nn1g06530' => 'nnu', 'Nn3g16404' => 'nnu', 'Nn3g17212' => 'nnu', 'Nn3g20776' => 'nnu', 'Nn3g21923' => 'nnu', 'Nn5g27737' => 'nnu', 'Nn5g29461' => 'nnu', 'Nn7g38355' => 'nnu', 'Nn8g39873' => 'nnu', 'Oeu000548.2' => 'oeu', 'Oeu004672.1' => 'oeu', 'Oeu015605.2' => 'oeu', 'Oeu016092.1' => 'oeu', 'Oeu017879.3' => 'oeu', 'Oeu024910.1' => 'oeu', 'Oeu028965.1' => 'oeu', 'Oeu031269.1' => 'oeu', 'Oeu031270.1' => 'oeu', 'Oeu032535.1' => 'oeu', 'Oeu034151.1' => 'oeu', 'Oeu034152.1' => 'oeu', 'Oeu034588.2' => 'oeu', 'Oeu050846.1' => 'oeu', 'Oeu050849.2' => 'oeu', 'Oeu051063.2' => 'oeu', 'Oeu052368.1' => 'oeu', 'Oeu052370.1' => 'oeu', 'Os01g0210400' => 'osa', 'Os01g0304300' => 'osa', 'Os01g0749100' => 'osa', 'Os02g0745800' => 'osa', 'Os03g0769050' => 'osa', 'Os05g0531500' => 'osa', 'Os06g0724300' => 'osa', 'Os11g0198100' => 'osa', 'Peaxi162Scf00069g01425' => 'pax', 'Peaxi162Scf00280g00811' => 'pax', 'Peaxi162Scf00310g00615' => 'pax', 'Peaxi162Scf00362g00542' => 'pax', 'Peaxi162Scf00461g00310' => 'pax', 'Peaxi162Scf00530g00118' => 'pax', 'Peaxi162Scf00541g00057' => 'pax', 'Peaxi162Scf00661g00017' => 'pax', 'Peaxi162Scf00926g00027' => 'pax', 'Peaxi162Scf01064g00263' => 'pax', 'Peaxi162Scf01211g00135' => 'pax', 'PGR004G2336' => 'pgr', 'PGR042G0327' => 'pgr', 'PGR042G1957' => 'pgr', 'PGR042G2003' => 'pgr', 'PGR042G3929' => 'pgr', 'PGR083G1137' => 'pgr', 'PGR083G1364' => 'pgr', 'PGSC0003DMG400003381' => 'stu', 'PGSC0003DMG400003417' => 'stu', 'PGSC0003DMG400008981' => 'stu', 'PGSC0003DMG400012417' => 'stu', 'PGSC0003DMG400012823' => 'stu', 'PGSC0003DMG400016885' => 'stu', 'PGSC0003DMG400022812' => 'stu', 'PGSC0003DMG400029726' => 'stu', 'PGSC0003DMG401009243' => 'stu', 'PGSC0003DMG401031505' => 'stu', 'PGSC0003DMG402031505' => 'stu', 'Phvul.001G017600' => 'pvu', 'Phvul.002G193500' => 'pvu', 'Phvul.002G228900' => 'pvu', 'Phvul.002G236800' => 'pvu', 'Phvul.003G049500' => 'pvu', 'Phvul.005G072000' => 'pvu', 'Phvul.006G164800' => 'pvu', 'Phvul.006G185100' => 'pvu', 'Phvul.007G090000' => 'pvu', 'Potri.001G399800' => 'ptr', 'Potri.002G149900' => 'ptr', 'Potri.004G044100' => 'ptr', 'Potri.004G177600' => 'ptr', 'Potri.009G138000' => 'ptr', 'Potri.010G094000' => 'ptr', 'Potri.011G053000' => 'ptr', 'Potri.011G119300' => 'ptr', 'Potri.013G113700' => 'ptr', 'Potri.018G107800' => 'ptr', 'Potri.019G084100' => 'ptr', 'Pp3c14_23720' => 'ppa', 'Pp3c16_6340' => 'ppa', 'Pp3c23_13420' => 'ppa', 'Pp3c24_2740' => 'ppa', 'Pp3c25_860' => 'ppa', 'Pp3c8_21750' => 'ppa', 'Prupe.1G273000' => 'ppe', 'Prupe.1G273700' => 'ppe', 'Prupe.1G274100' => 'ppe', 'Prupe.2G023300' => 'ppe', 'Prupe.4G048000' => 'ppe', 'Prupe.4G080400' => 'ppe', 'Prupe.4G181200' => 'ppe', 'Prupe.8G056900' => 'ppe', 'Prupe.8G168700' => 'ppe', 'Psat1g189080' => 'psa', 'Psat1g204760' => 'psa', 'Psat4g175560' => 'psa', 'Psat4g177720' => 'psa', 'Psat5g244240' => 'psa', 'Psat6g010720' => 'psa', 'Psat6g187200' => 'psa', 'Psat7g072040' => 'psa', 'PSO017G3501' => 'pso', 'PSO063G2148' => 'pso', 'PSO063G5608' => 'pso', 'PSO210G6392' => 'pso', 'PSO541G2319' => 'pso', 'PSO541G2836' => 'pso', 'PSO541G4012' => 'pso', 'PSO541G6253' => 'pso', 'PSO675G0580' => 'pso', 'PSO675G0856' => 'pso', 'PSO675G5635' => 'pso', 'PSO675G9157' => 'pso', 'PSO832G1660' => 'pso', 'PSO832G1969' => 'pso', 'QL02p007186' => 'qlo', 'QL02p033904' => 'qlo', 'QL03p064391' => 'qlo', 'QL05p040593' => 'qlo', 'QL05p058242' => 'qlo', 'QL08p021825' => 'qlo', 'QL11p004981' => 'qlo', 'RcHm_v2.0_Chr1g0318301' => 'rch', 'RcHm_v2.0_Chr4g0418501' => 'rch', 'RcHm_v2.0_Chr4g0439971' => 'rch', 'RcHm_v2.0_Chr5g0008541' => 'rch', 'RcHm_v2.0_Chr5g0014101' => 'rch', 'RcHm_v2.0_Chr5g0014131' => 'rch', 'RcHm_v2.0_Chr5g0033621' => 'rch', 'RcHm_v2.0_Chr6g0272041' => 'rch', 'RcHm_v2.0_Chr6g0278831' => 'rch', 'Rhsim02G0130400' => 'rsi', 'Rhsim02G0171100' => 'rsi', 'Rhsim05G0053000' => 'rsi', 'Rhsim05G0053100' => 'rsi', 'Rhsim06G0096500' => 'rsi', 'Rhsim06G0096600' => 'rsi', 'Rhsim06G0199100' => 'rsi', 'Rhsim12G0062300' => 'rsi', 'Rhsim12G0062800' => 'rsi', 'Sabra02G0118600' => 'sbr', 'Sabra04G0027300' => 'sbr', 'Sabra04G0119500' => 'sbr', 'Sabra08G0112500' => 'sbr', 'Sabra11G0036800' => 'sbr', 'Sabra11G0103800' => 'sbr', 'Sabra13G0096300' => 'sbr', 'Sabra16G0262300' => 'sbr', 'Sabra18G0091700' => 'sbr', 'Sabra19G0095400' => 'sbr', 'SalBow6G3080' => 'sbo', 'SalBow7G1157' => 'sbo', 'SalBow7G2123' => 'sbo', 'SalBow7G2285' => 'sbo', 'SalBow7G3537' => 'sbo', 'SalBow8G2947' => 'sbo', 'SalBow8G4463' => 'sbo', 'SalBow8G5466' => 'sbo', 'Sc01g0001750' => 'sci', 'Sc02g0006640' => 'sci', 'Sc02g0006670' => 'sci', 'Sc04g0008220' => 'sci', 'Sc05g0006190' => 'sci', 'Sc08g0002760' => 'sci', 'Sc17g0006170' => 'sci', 'Sc22g0002050' => 'sci', 'Sc23g0001190' => 'sci', 'Sc24g0000980' => 'sci', 'Sed0006245' => 'sed', 'Sed0007543' => 'sed', 'Sed0009411' => 'sed', 'Sed0010765' => 'sed', 'Sed0012944' => 'sed', 'Sed0014682' => 'sed', 'Sed0016174' => 'sed', 'Sed0016796' => 'sed', 'Sed0020317' => 'sed', 'Sed0021467' => 'sed', 'SEGI_01316' => 'sgi', 'SEGI_03374' => 'sgi', 'SEGI_16265' => 'sgi', 'SEGI_18569' => 'sgi', 'SEGI_20351' => 'sgi', 'SEGI_26395' => 'sgi', 'SEGI_29469' => 'sgi', 'SEGI_34771' => 'sgi', 'SEGI_36769' => 'sgi', 'SEGI_37139' => 'sgi', 'SGA_v2.0_scaffold100G29687' => 'sas', 'SGA_v2.0_scaffold118G32472' => 'sas', 'SGA_v2.0_scaffold14G07051' => 'sas', 'SGA_v2.0_scaffold183G39845' => 'sas', 'SGA_v2.0_scaffold1G00174' => 'sas', 'SGA_v2.0_scaffold22G09714' => 'sas', 'SGA_v2.0_scaffold333G48992' => 'sas', 'SGA_v2.0_scaffold46G17491' => 'sas', 'SGA_v2.0_scaffold49G18294' => 'sas', 'SGA_v2.0_scaffold63G21658' => 'sas', 'SHI01741' => 'shi', 'SHI05771' => 'shi', 'SHI18077' => 'shi', 'SHI20525' => 'shi', 'SHI20527' => 'shi', 'SHI20528' => 'shi', 'SMO172G0185' => 'smo', 'SMO198G0020' => 'smo', 'SMO351G0006' => 'smo', 'SMO356G0118' => 'smo', 'SMO358G0296' => 'smo', 'SMO367G0079' => 'smo', 'SMO367G1277' => 'smo', 'Solyc01g014220.3' => 'sly', 'Solyc01g111770.2' => 'sly', 'Solyc02g078180.3' => 'sly', 'Solyc03g006430.3' => 'sly', 'Solyc03g006456.1' => 'sly', 'Solyc03g079860.2' => 'sly', 'Solyc04g079770.3' => 'sly', 'Solyc05g007430.4' => 'sly', 'Solyc07g063150.3' => 'sly', 'Solyc08g016620.3' => 'sly', 'Solyc09g057590.3' => 'sly', 'Solyc09g057600.1' => 'sly', 'Solyc10g009050.3' => 'sly', 'Solyc11g017420.2' => 'sly', 'Sopen01g053810' => 'spe', 'Sopen02g023040' => 'spe', 'Sopen03g002440' => 'spe', 'Sopen04g033350' => 'spe', 'Sopen05g003310' => 'spe', 'Sopen07g004050' => 'spe', 'Sopen07g031340' => 'spe', 'Sopen08g006990' => 'spe', 'Sopen10g004830' => 'spe', 'Sopen11g009370' => 'spe', 'Sp1g24450' => 'spa', 'Sp1g29670' => 'spa', 'Sp1g39600' => 'spa', 'Sp2g11080' => 'spa', 'Sp2g13970' => 'spa', 'Sp4g16130' => 'spa', 'Sp6g13080' => 'spa', 'Sp7g37270' => 'spa', 'TAR371G0065' => 'tar', 'TAR376G0340' => 'tar', 'TAR376G0435' => 'tar', 'TAR381G0002' => 'tar', 'TAR381G1236' => 'tar', 'TAR624G0055' => 'tar', 'TAR624G0324' => 'tar', 'TAR624G0696' => 'tar', 'TAR624G0906' => 'tar', 'TAR625G0107' => 'tar', 'TAR626G0015' => 'tar', 'TAR626G1356' => 'tar', 'TAR627G0888' => 'tar', 'TAR628G0399' => 'tar', 'TAR628G1327' => 'tar', 'TAR629G2831' => 'tar', 'TAR629G2874' => 'tar', 'TAR633G1432' => 'tar', 'TAR633G2771' => 'tar', 'THA.LOC104803394' => 'tha', 'THA.LOC104805153' => 'tha', 'THA.LOC104806784' => 'tha', 'THA.LOC104810473' => 'tha', 'THA.LOC104813100' => 'tha', 'THA.LOC104814215' => 'tha', 'THA.LOC104815554' => 'tha', 'THA.LOC104820544' => 'tha', 'THA.LOC104824754' => 'tha', 'THA.LOC104827717' => 'tha', 'Thecc.02G031400' => 'tca', 'Thecc.02G055900' => 'tca', 'Thecc.02G350800' => 'tca', 'Thecc.06G150900' => 'tca', 'Thecc.06G186600' => 'tca', 'Thecc.07G089600' => 'tca', 'Thecc.08G020400' => 'tca', 'Thecc.08G182100' => 'tca', 'Thhalv10000873m.g' => 'esa', 'Thhalv10004185m.g' => 'esa', 'Thhalv10006981m.g' => 'esa', 'Thhalv10007204m.g' => 'esa', 'Thhalv10011374m.g' => 'esa', 'Thhalv10013482m.g' => 'esa', 'Thhalv10017801m.g' => 'esa', 'Thhalv10024983m.g' => 'esa', 'TPR.G12072' => 'tpr', 'TPR.G15769' => 'tpr', 'TPR.G16504' => 'tpr', 'TPR.G16506' => 'tpr', 'TPR.G24345' => 'tpr', 'TPR.G26666' => 'tpr', 'TPR.G27320' => 'tpr', 'TPR.G31819' => 'tpr', 'TPR.G38879' => 'tpr', 'TPR.G39015' => 'tpr', 'TPR.G8819' => 'tpr', 'TWI09G0924' => 'twi', 'TWI12G0811' => 'twi', 'TWI12G1294' => 'twi', 'TWI31G0150' => 'twi', 'TWI36G1262' => 'twi', 'TWI38G1287' => 'twi', 'TWI38G1633' => 'twi', 'TWI38G1982' => 'twi', 'TWI39G0116' => 'twi', 'TWI60G1011' => 'twi', 'TWI63G0171' => 'twi', 'TWI73G0839' => 'twi', 'TWI79G1511' => 'twi', 'unitig_0.g915' => 'ugi', 'unitig_0.g916' => 'ugi', 'unitig_21.g20219' => 'ugi', 'unitig_21.g20416' => 'ugi', 'unitig_578.g16132' => 'ugi', 'unitig_578.g16718' => 'ugi', 'unitig_62.g23481' => 'ugi', 'unitig_744.g24535' => 'ugi', 'unitig_749.g13525' => 'ugi', 'vmacro01248' => 'vma', 'vmacro02290' => 'vma', 'vmacro10946' => 'vma', 'vmacro11865' => 'vma', 'vmacro12493' => 'vma', 'vmacro17322' => 'vma', 'vmacro21599' => 'vma', 'vmacro23041' => 'vma', 'VMungo0251G0004' => 'vmu', 'VMungo0251G2639' => 'vmu', 'VMungo0251G2967' => 'vmu', 'VMungo0540G0864' => 'vmu', 'VMungo0540G1569' => 'vmu', 'VMungo0647G0317' => 'vmu', 'VMungo0720G1373' => 'vmu', 'VMungo0720G1508' => 'vmu', 'VMungo1080G0485' => 'vmu', 'VMungo1215G3177' => 'vmu', 'Zm00001eb112600' => 'zma', 'Zm00001eb120220' => 'zma', 'Zm00001eb153240' => 'zma', 'Zm00001eb168880' => 'zma', 'Zm00001eb213920' => 'zma', 'Zm00001eb228280' => 'zma', 'Zm00001eb254580' => 'zma', 'Zm00001eb272180' => 'zma', 'Zm00001eb293190' => 'zma', 'Zm00001eb322930' => 'zma', 'Zm00001eb353360' => 'zma', 'Zm00001eb353390' => 'zma', 'Zm00001eb353430' => 'zma', 'Zm00001eb353440' => 'zma', 'Zm00001eb353780' => 'zma' ) $gf_id = 'HOM05D000499' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000499' ) $data_identifier = 'HOM05D000499' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 29, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 12, 'amhyb' => (int) 8, 'aly' => (int) 12, 'aox' => (int) 9, 'arhy' => (int) 26, 'ath' => (int) 8, 'atr' => (int) 7, 'acertr' => (int) 10, 'cqu' => (int) 15, 'bca' => (int) 29, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 11, 'cansat' => (int) 8, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 9, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 8, 'cpa' => (int) 10, 'csa' => (int) 7, 'camsi' => (int) 20, 'dca' => (int) 8, 'din' => (int) 12, 'dzi' => (int) 14, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 6, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 38, 'gra' => (int) 16, 'vvi' => (int) 8, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 5, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 11, 'lja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 11, 'mpo' => (int) 3, 'mbi' => (int) 14, 'mdo' => (int) 14, 'mtr' => (int) 8, 'cme' => (int) 9, 'egut' => (int) 9, 'ama' => (int) 11, 'nta' => (int) 17, 'nnu' => (int) 11, 'oeu' => (int) 18, 'osa' => (int) 8, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 6, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 9, 'rsi' => (int) 9, 'sbr' => (int) 10, 'sbo' => (int) 8, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 10, 'sas' => (int) 10, 'shi' => (int) 6, 'smo' => (int) 7, 'sly' => (int) 14, 'spe' => (int) 10, 'spa' => (int) 8, 'tar' => (int) 19, 'tha' => (int) 10, 'tca' => (int) 8, 'esa' => (int) 8, 'tpr' => (int) 11, 'twi' => (int) 13, 'ugi' => (int) 9, 'vma' => (int) 8, 'vmu' => (int) 10, 'zma' => (int) 15 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb353780' $species_info = array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ) $local_species = 'vvi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000499', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1066', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p29780' => 'bna', 'A02p33180' => 'bna', 'A03p16470' => 'bna', 'A03p66010' => 'bna', 'A04p25970' => 'bna', 'A06p01270' => 'bna', 'A06p46080' => 'bna', 'A07p11400' => 'bna', 'A08p01840' => 'bna', 'A08p08230' => 'bna', 'A08p25740' => 'bna', 'A09p32070' => 'bna', 'A09p37830' => 'bna', 'A09p42840' => 'bna', 'A09p42850' => 'bna', 'Aa31LG10G2060' => 'aar', 'Aa31LG2G7410' => 'aar', 'Aa31LG6G10200' => 'aar', 'Aa31LG6G16680' => 'aar', 'Aa31LG6G8470' => 'aar', 'Aa31LG9G12730' => 'aar', 'Aa31LG9G13680' => 'aar', 'Aa31LG9G14920' => 'aar', 'Aa31LG9G6650' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4977' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5467' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3254' => 'aag', 'Actinidia02578' => 'ach', 'Actinidia07693' => 'ach', 'Actinidia08413' => 'ach', 'Actinidia08414' => 'ach', 'Actinidia15289' => 'ach', 'Actinidia19871' => 'ach', 'Actinidia21475' => 'ach', 'Actinidia22576' => 'ach', 'Actinidia28327' => 'ach', 'Actinidia32491' => 'ach', 'Actinidia39463' => 'ach', 'Actinidia39571' => 'ach', 'Ah.01g013750' => 'amhyb', 'Ah.01g023210' => 'amhyb', 'Ah.04g164850' => 'amhyb', 'Ah.05g178060' => 'amhyb', 'Ah.07g204270' => 'amhyb', 'Ah.07g208480' => 'amhyb', 'Ah.09g237410' => 'amhyb', 'Ah.14g089460' => 'amhyb', 'AL1G41790' => 'aly', 'AL1G49050' => 'aly', 'AL1G53810' => 'aly', 'AL1G61400' => 'aly', 'AL4G18580' => 'aly', 'AL5G12510' => 'aly', 'AL5G12540' => 'aly', 'AL6G43230' => 'aly', 'AL7G10370' => 'aly', 'AL7G19250' => 'aly', 'AL8G12240' => 'aly', 'AL8G18540' => 'aly', 'Aqoxy1G02409' => 'aox', 'Aqoxy2G03993' => 'aox', 'Aqoxy3G03357' => 'aox', 'Aqoxy4G00785' => 'aox', 'Aqoxy5G02598' => 'aox', 'Aqoxy6G00132' => 'aox', 'Aqoxy7G01776' => 'aox', 'Aqoxy7G02316' => 'aox', 'Aqoxy7G03973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.12AFKW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B8730' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27IQR1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3F75VG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3RE0GA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41TCQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.527VTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FIR39' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5W8UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DA38EV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ63HS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H1I32C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HC27T5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4M8AP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7N3CZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9UVDZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LS1NQA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT1D4B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SKC4TM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCFV76' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF9Q1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQWD9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1ZM88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WE07RT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YCK7VH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJE6Q6' => 'arhy', 'AT1G28240' => 'ath', 'AT1G34550' => 'ath', 'AT1G53040' => 'ath', 'AT2G02910' => 'ath', 'AT4G09630' => 'ath', 'AT4G38500' => 'ath', 'AT5G42660' => 'ath', 'AT5G46220' => 'ath', 'ATR0152G026' => 'atr', 'ATR0564G343' => 'atr', 'ATR0706G151' => 'atr', 'ATR0733G207' => 'atr', 'ATR0751G234' => 'atr', 'ATR0807G048' => 'atr', 'ATR1091G084' => 'atr', 'Atru.chr10.1229' => 'acertr', 'Atru.chr10.1230' => 'acertr', 'Atru.chr10.1874' => 'acertr', 'Atru.chr11.1808' => 'acertr', 'Atru.chr13.1795' => 'acertr', 'Atru.chr13.570' => 'acertr', 'Atru.chr2.2608' => 'acertr', 'Atru.chr2.2609' => 'acertr', 'Atru.chr5.3428' => 'acertr', 'Atru.chr8.1171' => 'acertr', 'AUR62004651' => 'cqu', 'AUR62008675' => 'cqu', 'AUR62010014' => 'cqu', 'AUR62013004' => 'cqu', 'AUR62014825' => 'cqu', 'AUR62015015' => 'cqu', 'AUR62015151' => 'cqu', 'AUR62017020' => 'cqu', 'AUR62019422' => 'cqu', 'AUR62023570' => 'cqu', 'AUR62025571' => 'cqu', 'AUR62029098' => 'cqu', 'AUR62033863' => 'cqu', 'AUR62034296' => 'cqu', 'AUR62040075' => 'cqu', 'BcaB02g07334' => 'bca', 'BcaB02g10575' => 'bca', 'BcaB03g12119' => 'bca', 'BcaB03g12120' => 'bca', 'BcaB03g13945' => 'bca', 'BcaB04g17123' => 'bca', 'BcaB04g17867' => 'bca', 'BcaB04g19839' => 'bca', 'BcaB07g30317' => 'bca', 'BcaB07g32432' => 'bca', 'BcaB07g33362' => 'bca', 'BcaB08g36611' => 'bca', 'BcaC01g00028' => 'bca', 'BcaC01g01356' => 'bca', 'BcaC01g02034' => 'bca', 'BcaC01g06051' => 'bca', 'BcaC03g16839' => 'bca', 'BcaC03g17176' => 'bca', 'BcaC05g26829' => 'bca', 'BcaC06g31490' => 'bca', 'BcaC06g35344' => 'bca', 'BcaC06g36570' => 'bca', 'BcaC07g37537' => 'bca', 'BcaC08g43491' => 'bca', 'BcaC08g43773' => 'bca', 'BcaNung00234' => 'bca', 'BcaNung01982' => 'bca', 'BcaNung03707' => 'bca', 'BcaNung06454' => 'bca', 'BolC2t10762H' => 'bol', 'BolC2t11191H' => 'bol', 'BolC3t14322H' => 'bol', 'BolC3t19747H' => 'bol', 'BolC3t21425H' => 'bol', 'BolC4t27800H' => 'bol', 'BolC5t31423H' => 'bol', 'BolC6t35951H' => 'bol', 'BolC6t36282H' => 'bol', 'BolC7t40678H' => 'bol', 'BolC7t40679H' => 'bol', 'BolC7t42222H' => 'bol', 'BolC7t43492H' => 'bol', 'BolC7t46785H' => 'bol', 'BolC8t47853H' => 'bol', 'BolC9t56805H' => 'bol', 'BraA02t08000Z' => 'bra', 'BraA02t08341Z' => 'bra', 'BraA03t10936Z' => 'bra', 'BraA03t15657Z' => 'bra', 'BraA04t18100Z' => 'bra', 'BraA05t20523Z' => 'bra', 'BraA06t23353Z' => 'bra', 'BraA06t27473Z' => 'bra', 'BraA06t27769Z' => 'bra', 'BraA07t28928Z' => 'bra', 'BraA08t32236Z' => 'bra', 'BraA08t32841Z' => 'bra', 'BraA08t34524Z' => 'bra', 'BraA09t38742Z' => 'bra', 'BraA09t39295Z' => 'bra', 'C02p47180' => 'bna', 'C02p50990' => 'bna', 'C03p19360' => 'bna', 'C03p74950' => 'bna', 'C03p91000' => 'bna', 'C04p63260' => 'bna', 'C05p27050' => 'bna', 'C06p08750' => 'bna', 'C06p11490' => 'bna', 'C07p02820' => 'bna', 'C07p17180' => 'bna', 'C07p29440' => 'bna', 'C07p63730' => 'bna', 'C09p39260' => 'bna', 'CAN.G1164.34' => 'can', 'CAN.G1164.39' => 'can', 'CAN.G1530.3' => 'can', 'CAN.G162.61' => 'can', 'CAN.G176.6' => 'can', 'CAN.G289.49' => 'can', 'CAN.G370.21' => 'can', 'CAN.G370.22' => 'can', 'CAN.G371.117' => 'can', 'CAN.G58.37' => 'can', 'CAN.G588.98' => 'can', 'CANSAT21G2266' => 'cansat', 'CANSAT25G2799' => 'cansat', 'CANSAT35G0862' => 'cansat', 'CANSAT35G1704' => 'cansat', 'CANSAT35G1760' => 'cansat', 'CANSAT56G3971' => 'cansat', 'CANSAT56G4116' => 'cansat', 'CANSAT80G1259' => 'cansat', 'CARHR027730' => 'chi', 'CARHR033880' => 'chi', 'CARHR043270' => 'chi', 'CARHR145330' => 'chi', 'CARHR145340' => 'chi', 'CARHR175570' => 'chi', 'CARHR181570' => 'chi', 'CARHR258470' => 'chi', 'CARHR260490' => 'chi', 'CARHR294220' => 'chi', 'Carub.0001s2668' => 'cru', 'Carub.0001s3257' => 'cru', 'Carub.0001s4220' => 'cru', 'Carub.0005s0179' => 'cru', 'Carub.0006s2807' => 'cru', 'Carub.0007s0039' => 'cru', 'Carub.0008s0169' => 'cru', 'Carub.0008s0636' => 'cru', 'Ca_00338_v3' => 'car', 'Ca_00542_v3' => 'car', 'Ca_01844_v3' => 'car', 'Ca_10611_v3' => 'car', 'Ca_13326_v3' => 'car', 'Ca_17944_v3' => 'car', 'Ca_18546_v3' => 'car', 'Ca_24219_v3' => 'car', 'Ca_29972_v3' => 'car', 'CBR_g3681' => 'cbr', 'CBR_g40021' => 'cbr', 'Cc01_g08140' => 'ccan', 'Cc02_g13410' => 'ccan', 'Cc02_g37480' => 'ccan', 'Cc05_g12030' => 'ccan', 'Cc09_g03370' => 'ccan', 'Cc09_g10300' => 'ccan', 'Cc10_g03530' => 'ccan', 'Cc10_g11380' => 'ccan', 'CDE01G0176' => 'cde', 'CDE02G0675' => 'cde', 'CDE02G0942' => 'cde', 'CDE02G1153' => 'cde', 'CDE02G4177' => 'cde', 'CDE04G2117' => 'cde', 'CDE04G2736' => 'cde', 'CDE08G1161' => 'cde', 'CDE09G1238' => 'cde', 'Cfa000467' => 'cfa', 'Cfa000947' => 'cfa', 'Cfa004969' => 'cfa', 'Cfa005284' => 'cfa', 'Cfa008993' => 'cfa', 'Cfa018187' => 'cfa', 'Cfa018454' => 'cfa', 'Cfa020585' => 'cfa', 'Ciclev10000424m.g' => 'ccl', 'Ciclev10003605m.g' => 'ccl', 'Ciclev10007828m.g' => 'ccl', 'Ciclev10014620m.g' => 'ccl', 'Ciclev10015169m.g' => 'ccl', 'Ciclev10018291m.g' => 'ccl', 'Ciclev10028256m.g' => 'ccl', 'Ciclev10033822m.g' => 'ccl', 'CiPaw.05G060300' => 'cil', 'CiPaw.05G085000' => 'cil', 'CiPaw.06G083700' => 'cil', 'CiPaw.06G120300' => 'cil', 'CiPaw.09G060500' => 'cil', 'CiPaw.09G123800' => 'cil', 'CiPaw.11G169700' => 'cil', 'CiPaw.12G118300' => 'cil', 'CiPaw.15G071000' => 'cil', 'CiPaw.15G081900' => 'cil', 'ClCG01G024610' => 'cla', 'ClCG03G006070' => 'cla', 'ClCG05G019250' => 'cla', 'ClCG09G009500' => 'cla', 'ClCG11G008200' => 'cla', 'ClCG11G018080' => 'cla', 'COL.COLO4_17373' => 'col', 'COL.COLO4_22994' => 'col', 'COL.COLO4_26389' => 'col', 'COL.COLO4_27170' => 'col', 'COL.COLO4_31074' => 'col', 'COL.COLO4_31465' => 'col', 'COL.COLO4_36438' => 'col', 'COL.COLO4_36439' => 'col', 'Cpa.g.c38781' => 'cpa', 'Cpa.g.sc128.12' => 'cpa', 'Cpa.g.sc166.7' => 'cpa', 'Cpa.g.sc166.8' => 'cpa', 'Cpa.g.sc20.111' => 'cpa', 'Cpa.g.sc27.31' => 'cpa', 'Cpa.g.sc64.36' => 'cpa', 'Cpa.g.sc64.37' => 'cpa', 'Cpa.g.sc66.49' => 'cpa', 'Cpa.g.sc80.64' => 'cpa', 'CsaV3_1G012320' => 'csa', 'CsaV3_2G008480' => 'csa', 'CsaV3_2G033450' => 'csa', 'CsaV3_3G044830' => 'csa', 'CsaV3_4G033710' => 'csa', 'CsaV3_6G051730' => 'csa', 'CsaV3_7G025350' => 'csa', 'CSS0001067' => 'camsi', 'CSS0005996' => 'camsi', 'CSS0006590' => 'camsi', 'CSS0009673' => 'camsi', 'CSS0010201' => 'camsi', 'CSS0010549' => 'camsi', 'CSS0011364' => 'camsi', 'CSS0014473' => 'camsi', 'CSS0014961' => 'camsi', 'CSS0020191' => 'camsi', 'CSS0021165' => 'camsi', 'CSS0022306' => 'camsi', 'CSS0030591' => 'camsi', 'CSS0030696' => 'camsi', 'CSS0032653' => 'camsi', 'CSS0037487' => 'camsi', 'CSS0041102' => 'camsi', 'CSS0041261' => 'camsi', 'CSS0046246' => 'camsi', 'CSS0049256' => 'camsi', 'DCAR_004075' => 'dca', 'DCAR_011538' => 'dca', 'DCAR_019553' => 'dca', 'DCAR_020952' => 'dca', 'DCAR_021739' => 'dca', 'DCAR_027407' => 'dca', 'DCAR_027913' => 'dca', 'DCAR_028066' => 'dca', 'Dinv05899' => 'din', 'Dinv07563' => 'din', 'Dinv08010' => 'din', 'Dinv14125' => 'din', 'Dinv20172' => 'din', 'Dinv30743' => 'din', 'Dinv31229' => 'din', 'Dinv34162' => 'din', 'Dinv36028' => 'din', 'Dinv39368' => 'din', 'Dinv40565' => 'din', 'Dinv41706' => 'din', 'Duzib052G0089' => 'dzi', 'Duzib116G0641' => 'dzi', 'Duzib132G0069' => 'dzi', 'Duzib132G1219' => 'dzi', 'Duzib147G0278' => 'dzi', 'Duzib160G0480' => 'dzi', 'Duzib170G0661' => 'dzi', 'Duzib177G0591' => 'dzi', 'Duzib187G1353' => 'dzi', 'Duzib192G0858' => 'dzi', 'Duzib192G0883' => 'dzi', 'Duzib213G0506' => 'dzi', 'Duzib235G0289' => 'dzi', 'Duzib251G0422' => 'dzi', 'ECA232G3898' => 'eca', 'ECA233G5950' => 'eca', 'ECA234G1699' => 'eca', 'ECA234G2421' => 'eca', 'ECA236G0426' => 'eca', 'ECA236G4331' => 'eca', 'ECA248G2573' => 'eca', 'EL10Ac1g00077' => 'bvu', 'EL10Ac1g01746' => 'bvu', 'EL10Ac2g03464' => 'bvu', 'EL10Ac4g08176' => 'bvu', 'EL10Ac7g17521' => 'bvu', 'EL10Ac8g20386' => 'bvu', 'EL10Ac9g21343' => 'bvu', 'EL10Ac9g22688' => 'bvu', 'Eucgr.B03434' => 'egr', 'Eucgr.D00618' => 'egr', 'Eucgr.E02395' => 'egr', 'Eucgr.F01129' => 'egr', 'Eucgr.F02622' => 'egr', 'Eucgr.F04207' => 'egr', 'FAN01G0570' => 'fan', 'FAN03G3351' => 'fan', 'FAN06G3702' => 'fan', 'FAN07G2149' => 'fan', 'FAN10G3758' => 'fan', 'FAN11G1170' => 'fan', 'FAN11G2050' => 'fan', 'FAN11G2724' => 'fan', 'FAN12G1700' => 'fan', 'FAN12G2028' => 'fan', 'FAN15G1160' => 'fan', 'FAN15G3063' => 'fan', 'FAN16G2540' => 'fan', 'FAN16G3077' => 'fan', 'FAN16G3624' => 'fan', 'FAN17G0221' => 'fan', 'FAN20G2492' => 'fan', 'FAN20G2905' => 'fan', 'FAN21G0548' => 'fan', 'FAN21G1300' => 'fan', 'FAN22G0077' => 'fan', 'FAN22G1315' => 'fan', 'FAN24G1280' => 'fan', 'FAN24G1445' => 'fan', 'FAN24G3527' => 'fan', 'FAN25G0464' => 'fan', 'FAN25G2885' => 'fan', 'FAN25G3270' => 'fan', 'FAN27G1101' => 'fan', 'FAN27G2846' => 'fan', 'FAN27G3524' => 'fan', 'FvH4_2g11770' => 'fve', 'FvH4_2g15630' => 'fve', 'FvH4_3g05570' => 'fve', 'FvH4_3g09110' => 'fve', 'FvH4_3g19940' => 'fve', 'FvH4_4g04821' => 'fve', 'FvH4_4g31480' => 'fve', 'FvH4_7g01740' => 'fve', 'Glyma.05G130400' => 'gma', 'Glyma.05G156400' => 'gma', 'Glyma.07G197000' => 'gma', 'Glyma.08G085151' => 'gma', 'Glyma.08G114500' => 'gma', 'Glyma.08G300400' => 'gma', 'Glyma.10G215800' => 'gma', 'Glyma.12G224400' => 'gma', 'Glyma.13G179300' => 'gma', 'Glyma.13G218151' => 'gma', 'Glyma.13G238800' => 'gma', 'Glyma.13G276900' => 'gma', 'Glyma.14G078200' => 'gma', 'Glyma.15G074500' => 'gma', 'Glyma.15G094100' => 'gma', 'Glyma.17G247200' => 'gma', 'Glyma.18G120100' => 'gma', 'Glyma.20G176000' => 'gma', 'Gohir.A01G063600' => 'ghi', 'Gohir.A01G170301' => 'ghi', 'Gohir.A02G060500' => 'ghi', 'Gohir.A05G133850' => 'ghi', 'Gohir.A05G161400' => 'ghi', 'Gohir.A06G012900' => 'ghi', 'Gohir.A06G035901' => 'ghi', 'Gohir.A06G127100' => 'ghi', 'Gohir.A06G210500' => 'ghi', 'Gohir.A08G008650' => 'ghi', 'Gohir.A09G072700' => 'ghi', 'Gohir.A09G088301' => 'ghi', 'Gohir.A10G040600' => 'ghi', 'Gohir.A12G036300' => 'ghi', 'Gohir.A12G143350' => 'ghi', 'Gohir.A12G165500' => 'ghi', 'Gohir.A13G145700' => 'ghi', 'Gohir.D01G050000' => 'ghi', 'Gohir.D01G051366' => 'ghi', 'Gohir.D01G161350' => 'ghi', 'Gohir.D02G065900' => 'ghi', 'Gohir.D05G164200' => 'ghi', 'Gohir.D05G355500' => 'ghi', 'Gohir.D06G010400' => 'ghi', 'Gohir.D06G111250' => 'ghi', 'Gohir.D06G132000' => 'ghi', 'Gohir.D06G210500' => 'ghi', 'Gohir.D07G165675' => 'ghi', 'Gohir.D08G062240' => 'ghi', 'Gohir.D08G086101' => 'ghi', 'Gohir.D08G138060' => 'ghi', 'Gohir.D09G072300' => 'ghi', 'Gohir.D10G041400' => 'ghi', 'Gohir.D11G191020' => 'ghi', 'Gohir.D11G212066' => 'ghi', 'Gohir.D12G036300' => 'ghi', 'Gohir.D12G168600' => 'ghi', 'Gohir.D13G150600' => 'ghi', 'Gorai.001G057300' => 'gra', 'Gorai.002G069900' => 'gra', 'Gorai.002G200000' => 'gra', 'Gorai.003G067600' => 'gra', 'Gorai.005G074800' => 'gra', 'Gorai.006G087300' => 'gra', 'Gorai.008G037500' => 'gra', 'Gorai.008G181400' => 'gra', 'Gorai.009G169400' => 'gra', 'Gorai.009G387900' => 'gra', 'Gorai.010G013300' => 'gra', 'Gorai.010G153800' => 'gra', 'Gorai.010G255800' => 'gra', 'Gorai.011G043700' => 'gra', 'Gorai.011G198900' => 'gra', 'Gorai.013G168400' => 'gra', 'GSVIVG01005212001' => 'vvi', 'GSVIVG01006163001' => 'vvi', 'GSVIVG01009625001' => 'vvi', 'GSVIVG01014338001' => 'vvi', 'GSVIVG01020005001' => 'vvi', 'GSVIVG01021450001' => 'vvi', 'GSVIVG01023975001' => 'vvi', 'GSVIVG01034490001' => 'vvi', 'HanXRQChr04g0112071' => 'han', 'HanXRQChr05g0131151' => 'han', 'HanXRQChr09g0262371' => 'han', 'HanXRQChr09g0268401' => 'han', 'HanXRQChr10g0279241' => 'han', 'HanXRQChr10g0297961' => 'han', 'HanXRQChr11g0326231' => 'han', 'HanXRQChr11g0328471' => 'han', 'HanXRQChr16g0507941' => 'han', 'HanXRQChr17g0560211' => 'han', 'Haze_02108' => 'cav', 'Haze_02428' => 'cav', 'Haze_05593' => 'cav', 'Haze_06448' => 'cav', 'Haze_09427' => 'cav', 'Haze_12022' => 'cav', 'Haze_17612' => 'cav', 'Haze_17928' => 'cav', 'Hma1.2p1_0032F.1_g019250' => 'hma', 'Hma1.2p1_0163F.1_g072690' => 'hma', 'Hma1.2p1_0265F.1_g106710' => 'hma', 'Hma1.2p1_0286F.1_g113970' => 'hma', 'Hma1.2p1_0363F.1_g136640' => 'hma', 'Hma1.2p1_0584F.1_g183470' => 'hma', 'Hma1.2p1_0885F.1_g232570' => 'hma', 'HPP92_006022' => 'vpl', 'HPP92_007320' => 'vpl', 'HPP92_011521' => 'vpl', 'HPP92_019387' => 'vpl', 'HPP92_024038' => 'vpl', 'Hund05891' => 'sun', 'Hund06450' => 'sun', 'Hund12053' => 'sun', 'Hund16800' => 'sun', 'Hund21222' => 'sun', 'Hund22896' => 'sun', 'Hund23746' => 'sun', 'Hund27083' => 'sun', 'Lalb_Chr02g0141831' => 'lal', 'Lalb_Chr02g0141841' => 'lal', 'Lalb_Chr05g0220411' => 'lal', 'Lalb_Chr06g0162081' => 'lal', 'Lalb_Chr09g0327651' => 'lal', 'Lalb_Chr13g0295051' => 'lal', 'Lalb_Chr15g0086801' => 'lal', 'Lalb_Chr16g0383781' => 'lal', 'Lalb_Chr16g0383791' => 'lal', 'Lalb_Chr18g0055441' => 'lal', 'Lalb_Chr18g0059611' => 'lal', 'Lalb_Chr20g0109661' => 'lal', 'Lalb_Chr20g0109831' => 'lal', 'Lalb_Chr20g0121871' => 'lal', 'Lalb_Chr22g0355361' => 'lal', 'Lalb_Chr25g0286371' => 'lal', 'Lj1A1187G43' => 'lonja', 'Lj1A1205T50' => 'lonja', 'Lj1A800G33' => 'lonja', 'Lj1C1187T7' => 'lonja', 'Lj1C843T11' => 'lonja', 'Lj1g0010940' => 'lja', 'Lj2A288T69' => 'lonja', 'Lj3g0024276' => 'lja', 'Lj4A47T76' => 'lonja', 'Lj4g0005805' => 'lja', 'Lj4g0006097' => 'lja', 'Lj4g0008528' => 'lja', 'Lj4g0024907' => 'lja', 'Lj5g0012472' => 'lja', 'Lj5g0018648' => 'lja', 'Lj6C789G1' => 'lonja', 'Lj6g0004000' => 'lja', 'Lj7A292G67' => 'lonja', 'Lj7A292T64' => 'lonja', 'Lj9A400T58' => 'lonja', 'Lsat_1_v5_gn_1_126181' => 'lsa', 'Lsat_1_v5_gn_4_123041' => 'lsa', 'Lsat_1_v5_gn_4_133620' => 'lsa', 'Lsat_1_v5_gn_4_53221' => 'lsa', 'Lsat_1_v5_gn_4_71961' => 'lsa', 'Lsat_1_v5_gn_7_105241' => 'lsa', 'Lsat_1_v5_gn_7_21361' => 'lsa', 'Lsat_1_v5_gn_7_28860' => 'lsa', 'Lsat_1_v5_gn_7_31260' => 'lsa', 'Lsat_1_v5_gn_8_52801' => 'lsa', 'Manes.02G191400' => 'mes', 'Manes.03G110100' => 'mes', 'Manes.04G071100' => 'mes', 'Manes.05G100500' => 'mes', 'Manes.05G164700' => 'mes', 'Manes.15G087000' => 'mes', 'Manes.15G121500' => 'mes', 'Manes.16G028300' => 'mes', 'Manes.17G046100' => 'mes', 'Manes.17G069800' => 'mes', 'Manes.18G100500' => 'mes', 'Mapoly0002s0109' => 'mpo', 'Mapoly0024s0007' => 'mpo', 'Mapoly0089s0032' => 'mpo', 'MBI04_g42241_MAGBIO' => 'mbi', 'MBI05_g11988_MAGBIO' => 'mbi', 'MBI05_g35452_MAGBIO' => 'mbi', 'MBI07_g30179_MAGBIO' => 'mbi', 'MBI07_g35859_MAGBIO' => 'mbi', 'MBI07_g35860_MAGBIO' => 'mbi', 'MBI07_g37166_MAGBIO' => 'mbi', 'MBI08_g18172_MAGBIO' => 'mbi', 'MBI09_g08441_MAGBIO' => 'mbi', 'MBI13_g01676_MAGBIO' => 'mbi', 'MBI14_g42955_MAGBIO' => 'mbi', 'MBI16_g13161_MAGBIO' => 'mbi', 'MBI17_g27204_MAGBIO' => 'mbi', 'MBI19_g21595_MAGBIO' => 'mbi', 'MD00G1148400' => 'mdo', 'MD02G1301200' => 'mdo', 'MD03G1227800' => 'mdo', 'MD05G1041100' => 'mdo', 'MD05G1124800' => 'mdo', 'MD05G1284000' => 'mdo', 'MD05G1338800' => 'mdo', 'MD05G1338900' => 'mdo', 'MD07G1022800' => 'mdo', 'MD10G1047500' => 'mdo', 'MD10G1127500' => 'mdo', 'MD10G1262300' => 'mdo', 'MD10G1293800' => 'mdo', 'MD16G1074300' => 'mdo', 'Medtr1g021670' => 'mtr', 'Medtr1g096320' => 'mtr', 'Medtr2g013690' => 'mtr', 'Medtr2g019450' => 'mtr', 'Medtr2g085170' => 'mtr', 'Medtr4g088785' => 'mtr', 'Medtr8g055930' => 'mtr', 'Medtr8g085850' => 'mtr', 'MELO3C002605.2' => 'cme', 'MELO3C003891.2' => 'cme', 'MELO3C004012.2' => 'cme', 'MELO3C007134.2' => 'cme', 'MELO3C008118.2' => 'cme', 'MELO3C016700.2' => 'cme', 'MELO3C024127.2' => 'cme', 'MELO3C033361.2' => 'cme', 'MELO3C033362.2' => 'cme', 'Migut.C00430' => 'egut', 'Migut.C01246' => 'egut', 'Migut.E00101' => 'egut', 'Migut.H01486' => 'egut', 'Migut.H01939' => 'egut', 'Migut.K00360' => 'egut', 'Migut.M00910' => 'egut', 'Migut.M01139' => 'egut', 'Migut.N02677' => 'egut', 'MSTRG.13252' => 'ama', 'MSTRG.14701' => 'ama', 'MSTRG.1521' => 'ama', 'MSTRG.15884' => 'ama', 'MSTRG.16242' => 'ama', 'MSTRG.22285' => 'ama', 'MSTRG.22444' => 'ama', 'MSTRG.2349' => 'ama', 'MSTRG.26308' => 'ama', 'MSTRG.28296' => 'ama', 'MSTRG.9895' => 'ama', 'Nitab4.5_0000110g0060' => 'nta', 'Nitab4.5_0000420g0130' => 'nta', 'Nitab4.5_0000422g0030' => 'nta', 'Nitab4.5_0000560g0180' => 'nta', 'Nitab4.5_0000703g0100' => 'nta', 'Nitab4.5_0000786g0200' => 'nta', 'Nitab4.5_0001336g0020' => 'nta', 'Nitab4.5_0001796g0030' => 'nta', 'Nitab4.5_0003348g0060' => 'nta', 'Nitab4.5_0003698g0040' => 'nta', 'Nitab4.5_0003942g0090' => 'nta', 'Nitab4.5_0004775g0070' => 'nta', 'Nitab4.5_0004864g0030' => 'nta', 'Nitab4.5_0005615g0020' => 'nta', 'Nitab4.5_0009288g0030' => 'nta', 'Nitab4.5_0009341g0010' => 'nta', 'Nitab4.5_0009535g0010' => 'nta', 'Nn1g03995' => 'nnu', 'Nn1g04100' => 'nnu', 'Nn1g06530' => 'nnu', 'Nn3g16404' => 'nnu', 'Nn3g17212' => 'nnu', 'Nn3g20776' => 'nnu', 'Nn3g21923' => 'nnu', 'Nn5g27737' => 'nnu', 'Nn5g29461' => 'nnu', 'Nn7g38355' => 'nnu', 'Nn8g39873' => 'nnu', 'Oeu000548.2' => 'oeu', 'Oeu004672.1' => 'oeu', 'Oeu015605.2' => 'oeu', 'Oeu016092.1' => 'oeu', 'Oeu017879.3' => 'oeu', 'Oeu024910.1' => 'oeu', 'Oeu028965.1' => 'oeu', 'Oeu031269.1' => 'oeu', 'Oeu031270.1' => 'oeu', 'Oeu032535.1' => 'oeu', 'Oeu034151.1' => 'oeu', 'Oeu034152.1' => 'oeu', 'Oeu034588.2' => 'oeu', 'Oeu050846.1' => 'oeu', 'Oeu050849.2' => 'oeu', 'Oeu051063.2' => 'oeu', 'Oeu052368.1' => 'oeu', 'Oeu052370.1' => 'oeu', 'Os01g0210400' => 'osa', 'Os01g0304300' => 'osa', 'Os01g0749100' => 'osa', 'Os02g0745800' => 'osa', 'Os03g0769050' => 'osa', 'Os05g0531500' => 'osa', 'Os06g0724300' => 'osa', 'Os11g0198100' => 'osa', 'Peaxi162Scf00069g01425' => 'pax', 'Peaxi162Scf00280g00811' => 'pax', 'Peaxi162Scf00310g00615' => 'pax', 'Peaxi162Scf00362g00542' => 'pax', 'Peaxi162Scf00461g00310' => 'pax', 'Peaxi162Scf00530g00118' => 'pax', 'Peaxi162Scf00541g00057' => 'pax', 'Peaxi162Scf00661g00017' => 'pax', 'Peaxi162Scf00926g00027' => 'pax', 'Peaxi162Scf01064g00263' => 'pax', 'Peaxi162Scf01211g00135' => 'pax', 'PGR004G2336' => 'pgr', 'PGR042G0327' => 'pgr', 'PGR042G1957' => 'pgr', 'PGR042G2003' => 'pgr', 'PGR042G3929' => 'pgr', 'PGR083G1137' => 'pgr', 'PGR083G1364' => 'pgr', 'PGSC0003DMG400003381' => 'stu', 'PGSC0003DMG400003417' => 'stu', 'PGSC0003DMG400008981' => 'stu', 'PGSC0003DMG400012417' => 'stu', 'PGSC0003DMG400012823' => 'stu', 'PGSC0003DMG400016885' => 'stu', 'PGSC0003DMG400022812' => 'stu', 'PGSC0003DMG400029726' => 'stu', 'PGSC0003DMG401009243' => 'stu', 'PGSC0003DMG401031505' => 'stu', 'PGSC0003DMG402031505' => 'stu', 'Phvul.001G017600' => 'pvu', 'Phvul.002G193500' => 'pvu', 'Phvul.002G228900' => 'pvu', 'Phvul.002G236800' => 'pvu', 'Phvul.003G049500' => 'pvu', 'Phvul.005G072000' => 'pvu', 'Phvul.006G164800' => 'pvu', 'Phvul.006G185100' => 'pvu', 'Phvul.007G090000' => 'pvu', 'Potri.001G399800' => 'ptr', 'Potri.002G149900' => 'ptr', 'Potri.004G044100' => 'ptr', 'Potri.004G177600' => 'ptr', 'Potri.009G138000' => 'ptr', 'Potri.010G094000' => 'ptr', 'Potri.011G053000' => 'ptr', 'Potri.011G119300' => 'ptr', 'Potri.013G113700' => 'ptr', 'Potri.018G107800' => 'ptr', 'Potri.019G084100' => 'ptr', 'Pp3c14_23720' => 'ppa', 'Pp3c16_6340' => 'ppa', 'Pp3c23_13420' => 'ppa', 'Pp3c24_2740' => 'ppa', 'Pp3c25_860' => 'ppa', 'Pp3c8_21750' => 'ppa', 'Prupe.1G273000' => 'ppe', 'Prupe.1G273700' => 'ppe', 'Prupe.1G274100' => 'ppe', 'Prupe.2G023300' => 'ppe', 'Prupe.4G048000' => 'ppe', 'Prupe.4G080400' => 'ppe', 'Prupe.4G181200' => 'ppe', 'Prupe.8G056900' => 'ppe', 'Prupe.8G168700' => 'ppe', 'Psat1g189080' => 'psa', 'Psat1g204760' => 'psa', 'Psat4g175560' => 'psa', 'Psat4g177720' => 'psa', 'Psat5g244240' => 'psa', 'Psat6g010720' => 'psa', 'Psat6g187200' => 'psa', 'Psat7g072040' => 'psa', 'PSO017G3501' => 'pso', 'PSO063G2148' => 'pso', 'PSO063G5608' => 'pso', 'PSO210G6392' => 'pso', 'PSO541G2319' => 'pso', 'PSO541G2836' => 'pso', 'PSO541G4012' => 'pso', 'PSO541G6253' => 'pso', 'PSO675G0580' => 'pso', 'PSO675G0856' => 'pso', 'PSO675G5635' => 'pso', 'PSO675G9157' => 'pso', 'PSO832G1660' => 'pso', 'PSO832G1969' => 'pso', 'QL02p007186' => 'qlo', 'QL02p033904' => 'qlo', 'QL03p064391' => 'qlo', 'QL05p040593' => 'qlo', 'QL05p058242' => 'qlo', 'QL08p021825' => 'qlo', 'QL11p004981' => 'qlo', 'RcHm_v2.0_Chr1g0318301' => 'rch', 'RcHm_v2.0_Chr4g0418501' => 'rch', 'RcHm_v2.0_Chr4g0439971' => 'rch', 'RcHm_v2.0_Chr5g0008541' => 'rch', 'RcHm_v2.0_Chr5g0014101' => 'rch', 'RcHm_v2.0_Chr5g0014131' => 'rch', 'RcHm_v2.0_Chr5g0033621' => 'rch', 'RcHm_v2.0_Chr6g0272041' => 'rch', 'RcHm_v2.0_Chr6g0278831' => 'rch', 'Rhsim02G0130400' => 'rsi', 'Rhsim02G0171100' => 'rsi', 'Rhsim05G0053000' => 'rsi', 'Rhsim05G0053100' => 'rsi', 'Rhsim06G0096500' => 'rsi', 'Rhsim06G0096600' => 'rsi', 'Rhsim06G0199100' => 'rsi', 'Rhsim12G0062300' => 'rsi', 'Rhsim12G0062800' => 'rsi', 'Sabra02G0118600' => 'sbr', 'Sabra04G0027300' => 'sbr', 'Sabra04G0119500' => 'sbr', 'Sabra08G0112500' => 'sbr', 'Sabra11G0036800' => 'sbr', 'Sabra11G0103800' => 'sbr', 'Sabra13G0096300' => 'sbr', 'Sabra16G0262300' => 'sbr', 'Sabra18G0091700' => 'sbr', 'Sabra19G0095400' => 'sbr', 'SalBow6G3080' => 'sbo', 'SalBow7G1157' => 'sbo', 'SalBow7G2123' => 'sbo', 'SalBow7G2285' => 'sbo', 'SalBow7G3537' => 'sbo', 'SalBow8G2947' => 'sbo', 'SalBow8G4463' => 'sbo', 'SalBow8G5466' => 'sbo', 'Sc01g0001750' => 'sci', 'Sc02g0006640' => 'sci', 'Sc02g0006670' => 'sci', 'Sc04g0008220' => 'sci', 'Sc05g0006190' => 'sci', 'Sc08g0002760' => 'sci', 'Sc17g0006170' => 'sci', 'Sc22g0002050' => 'sci', 'Sc23g0001190' => 'sci', 'Sc24g0000980' => 'sci', 'Sed0006245' => 'sed', 'Sed0007543' => 'sed', 'Sed0009411' => 'sed', 'Sed0010765' => 'sed', 'Sed0012944' => 'sed', 'Sed0014682' => 'sed', 'Sed0016174' => 'sed', 'Sed0016796' => 'sed', 'Sed0020317' => 'sed', 'Sed0021467' => 'sed', 'SEGI_01316' => 'sgi', 'SEGI_03374' => 'sgi', 'SEGI_16265' => 'sgi', 'SEGI_18569' => 'sgi', 'SEGI_20351' => 'sgi', 'SEGI_26395' => 'sgi', 'SEGI_29469' => 'sgi', 'SEGI_34771' => 'sgi', 'SEGI_36769' => 'sgi', 'SEGI_37139' => 'sgi', 'SGA_v2.0_scaffold100G29687' => 'sas', 'SGA_v2.0_scaffold118G32472' => 'sas', 'SGA_v2.0_scaffold14G07051' => 'sas', 'SGA_v2.0_scaffold183G39845' => 'sas', 'SGA_v2.0_scaffold1G00174' => 'sas', 'SGA_v2.0_scaffold22G09714' => 'sas', 'SGA_v2.0_scaffold333G48992' => 'sas', 'SGA_v2.0_scaffold46G17491' => 'sas', 'SGA_v2.0_scaffold49G18294' => 'sas', 'SGA_v2.0_scaffold63G21658' => 'sas', 'SHI01741' => 'shi', 'SHI05771' => 'shi', 'SHI18077' => 'shi', 'SHI20525' => 'shi', 'SHI20527' => 'shi', 'SHI20528' => 'shi', 'SMO172G0185' => 'smo', 'SMO198G0020' => 'smo', 'SMO351G0006' => 'smo', 'SMO356G0118' => 'smo', 'SMO358G0296' => 'smo', 'SMO367G0079' => 'smo', 'SMO367G1277' => 'smo', 'Solyc01g014220.3' => 'sly', 'Solyc01g111770.2' => 'sly', 'Solyc02g078180.3' => 'sly', 'Solyc03g006430.3' => 'sly', 'Solyc03g006456.1' => 'sly', 'Solyc03g079860.2' => 'sly', 'Solyc04g079770.3' => 'sly', 'Solyc05g007430.4' => 'sly', 'Solyc07g063150.3' => 'sly', 'Solyc08g016620.3' => 'sly', 'Solyc09g057590.3' => 'sly', 'Solyc09g057600.1' => 'sly', 'Solyc10g009050.3' => 'sly', 'Solyc11g017420.2' => 'sly', 'Sopen01g053810' => 'spe', 'Sopen02g023040' => 'spe', 'Sopen03g002440' => 'spe', 'Sopen04g033350' => 'spe', 'Sopen05g003310' => 'spe', 'Sopen07g004050' => 'spe', 'Sopen07g031340' => 'spe', 'Sopen08g006990' => 'spe', 'Sopen10g004830' => 'spe', 'Sopen11g009370' => 'spe', 'Sp1g24450' => 'spa', 'Sp1g29670' => 'spa', 'Sp1g39600' => 'spa', 'Sp2g11080' => 'spa', 'Sp2g13970' => 'spa', 'Sp4g16130' => 'spa', 'Sp6g13080' => 'spa', 'Sp7g37270' => 'spa', 'TAR371G0065' => 'tar', 'TAR376G0340' => 'tar', 'TAR376G0435' => 'tar', 'TAR381G0002' => 'tar', 'TAR381G1236' => 'tar', 'TAR624G0055' => 'tar', 'TAR624G0324' => 'tar', 'TAR624G0696' => 'tar', 'TAR624G0906' => 'tar', 'TAR625G0107' => 'tar', 'TAR626G0015' => 'tar', 'TAR626G1356' => 'tar', 'TAR627G0888' => 'tar', 'TAR628G0399' => 'tar', 'TAR628G1327' => 'tar', 'TAR629G2831' => 'tar', 'TAR629G2874' => 'tar', 'TAR633G1432' => 'tar', 'TAR633G2771' => 'tar', 'THA.LOC104803394' => 'tha', 'THA.LOC104805153' => 'tha', 'THA.LOC104806784' => 'tha', 'THA.LOC104810473' => 'tha', 'THA.LOC104813100' => 'tha', 'THA.LOC104814215' => 'tha', 'THA.LOC104815554' => 'tha', 'THA.LOC104820544' => 'tha', 'THA.LOC104824754' => 'tha', 'THA.LOC104827717' => 'tha', 'Thecc.02G031400' => 'tca', 'Thecc.02G055900' => 'tca', 'Thecc.02G350800' => 'tca', 'Thecc.06G150900' => 'tca', 'Thecc.06G186600' => 'tca', 'Thecc.07G089600' => 'tca', 'Thecc.08G020400' => 'tca', 'Thecc.08G182100' => 'tca', 'Thhalv10000873m.g' => 'esa', 'Thhalv10004185m.g' => 'esa', 'Thhalv10006981m.g' => 'esa', 'Thhalv10007204m.g' => 'esa', 'Thhalv10011374m.g' => 'esa', 'Thhalv10013482m.g' => 'esa', 'Thhalv10017801m.g' => 'esa', 'Thhalv10024983m.g' => 'esa', 'TPR.G12072' => 'tpr', 'TPR.G15769' => 'tpr', 'TPR.G16504' => 'tpr', 'TPR.G16506' => 'tpr', 'TPR.G24345' => 'tpr', 'TPR.G26666' => 'tpr', 'TPR.G27320' => 'tpr', 'TPR.G31819' => 'tpr', 'TPR.G38879' => 'tpr', 'TPR.G39015' => 'tpr', 'TPR.G8819' => 'tpr', 'TWI09G0924' => 'twi', 'TWI12G0811' => 'twi', 'TWI12G1294' => 'twi', 'TWI31G0150' => 'twi', 'TWI36G1262' => 'twi', 'TWI38G1287' => 'twi', 'TWI38G1633' => 'twi', 'TWI38G1982' => 'twi', 'TWI39G0116' => 'twi', 'TWI60G1011' => 'twi', 'TWI63G0171' => 'twi', 'TWI73G0839' => 'twi', 'TWI79G1511' => 'twi', 'unitig_0.g915' => 'ugi', 'unitig_0.g916' => 'ugi', 'unitig_21.g20219' => 'ugi', 'unitig_21.g20416' => 'ugi', 'unitig_578.g16132' => 'ugi', 'unitig_578.g16718' => 'ugi', 'unitig_62.g23481' => 'ugi', 'unitig_744.g24535' => 'ugi', 'unitig_749.g13525' => 'ugi', 'vmacro01248' => 'vma', 'vmacro02290' => 'vma', 'vmacro10946' => 'vma', 'vmacro11865' => 'vma', 'vmacro12493' => 'vma', 'vmacro17322' => 'vma', 'vmacro21599' => 'vma', 'vmacro23041' => 'vma', 'VMungo0251G0004' => 'vmu', 'VMungo0251G2639' => 'vmu', 'VMungo0251G2967' => 'vmu', 'VMungo0540G0864' => 'vmu', 'VMungo0540G1569' => 'vmu', 'VMungo0647G0317' => 'vmu', 'VMungo0720G1373' => 'vmu', 'VMungo0720G1508' => 'vmu', 'VMungo1080G0485' => 'vmu', 'VMungo1215G3177' => 'vmu', 'Zm00001eb112600' => 'zma', 'Zm00001eb120220' => 'zma', 'Zm00001eb153240' => 'zma', 'Zm00001eb168880' => 'zma', 'Zm00001eb213920' => 'zma', 'Zm00001eb228280' => 'zma', 'Zm00001eb254580' => 'zma', 'Zm00001eb272180' => 'zma', 'Zm00001eb293190' => 'zma', 'Zm00001eb322930' => 'zma', 'Zm00001eb353360' => 'zma', 'Zm00001eb353390' => 'zma', 'Zm00001eb353430' => 'zma', 'Zm00001eb353440' => 'zma', 'Zm00001eb353780' => 'zma' ), 'gf_id' => 'HOM05D000499', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000499' ), 'data_identifier' => 'HOM05D000499', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000499', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1066', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p29780' => 'bna', 'A02p33180' => 'bna', 'A03p16470' => 'bna', 'A03p66010' => 'bna', 'A04p25970' => 'bna', 'A06p01270' => 'bna', 'A06p46080' => 'bna', 'A07p11400' => 'bna', 'A08p01840' => 'bna', 'A08p08230' => 'bna', 'A08p25740' => 'bna', 'A09p32070' => 'bna', 'A09p37830' => 'bna', 'A09p42840' => 'bna', 'A09p42850' => 'bna', 'Aa31LG10G2060' => 'aar', 'Aa31LG2G7410' => 'aar', 'Aa31LG6G10200' => 'aar', 'Aa31LG6G16680' => 'aar', 'Aa31LG6G8470' => 'aar', 'Aa31LG9G12730' => 'aar', 'Aa31LG9G13680' => 'aar', 'Aa31LG9G14920' => 'aar', 'Aa31LG9G6650' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4977' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5467' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3254' => 'aag', 'Actinidia02578' => 'ach', 'Actinidia07693' => 'ach', 'Actinidia08413' => 'ach', 'Actinidia08414' => 'ach', 'Actinidia15289' => 'ach', 'Actinidia19871' => 'ach', 'Actinidia21475' => 'ach', 'Actinidia22576' => 'ach', 'Actinidia28327' => 'ach', 'Actinidia32491' => 'ach', 'Actinidia39463' => 'ach', 'Actinidia39571' => 'ach', 'Ah.01g013750' => 'amhyb', 'Ah.01g023210' => 'amhyb', 'Ah.04g164850' => 'amhyb', 'Ah.05g178060' => 'amhyb', 'Ah.07g204270' => 'amhyb', 'Ah.07g208480' => 'amhyb', 'Ah.09g237410' => 'amhyb', 'Ah.14g089460' => 'amhyb', 'AL1G41790' => 'aly', 'AL1G49050' => 'aly', 'AL1G53810' => 'aly', 'AL1G61400' => 'aly', 'AL4G18580' => 'aly', 'AL5G12510' => 'aly', 'AL5G12540' => 'aly', 'AL6G43230' => 'aly', 'AL7G10370' => 'aly', 'AL7G19250' => 'aly', 'AL8G12240' => 'aly', 'AL8G18540' => 'aly', 'Aqoxy1G02409' => 'aox', 'Aqoxy2G03993' => 'aox', 'Aqoxy3G03357' => 'aox', 'Aqoxy4G00785' => 'aox', 'Aqoxy5G02598' => 'aox', 'Aqoxy6G00132' => 'aox', 'Aqoxy7G01776' => 'aox', 'Aqoxy7G02316' => 'aox', 'Aqoxy7G03973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.12AFKW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B8730' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27IQR1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3F75VG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3RE0GA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41TCQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.527VTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FIR39' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5W8UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DA38EV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ63HS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H1I32C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HC27T5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4M8AP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7N3CZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9UVDZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LS1NQA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT1D4B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SKC4TM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCFV76' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF9Q1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQWD9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1ZM88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WE07RT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YCK7VH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJE6Q6' => 'arhy', 'AT1G28240' => 'ath', 'AT1G34550' => 'ath', 'AT1G53040' => 'ath', 'AT2G02910' => 'ath', 'AT4G09630' => 'ath', 'AT4G38500' => 'ath', 'AT5G42660' => 'ath', 'AT5G46220' => 'ath', 'ATR0152G026' => 'atr', 'ATR0564G343' => 'atr', 'ATR0706G151' => 'atr', 'ATR0733G207' => 'atr', 'ATR0751G234' => 'atr', 'ATR0807G048' => 'atr', 'ATR1091G084' => 'atr', 'Atru.chr10.1229' => 'acertr', 'Atru.chr10.1230' => 'acertr', 'Atru.chr10.1874' => 'acertr', 'Atru.chr11.1808' => 'acertr', 'Atru.chr13.1795' => 'acertr', 'Atru.chr13.570' => 'acertr', 'Atru.chr2.2608' => 'acertr', 'Atru.chr2.2609' => 'acertr', 'Atru.chr5.3428' => 'acertr', 'Atru.chr8.1171' => 'acertr', 'AUR62004651' => 'cqu', 'AUR62008675' => 'cqu', 'AUR62010014' => 'cqu', 'AUR62013004' => 'cqu', 'AUR62014825' => 'cqu', 'AUR62015015' => 'cqu', 'AUR62015151' => 'cqu', 'AUR62017020' => 'cqu', 'AUR62019422' => 'cqu', 'AUR62023570' => 'cqu', 'AUR62025571' => 'cqu', 'AUR62029098' => 'cqu', 'AUR62033863' => 'cqu', 'AUR62034296' => 'cqu', 'AUR62040075' => 'cqu', 'BcaB02g07334' => 'bca', 'BcaB02g10575' => 'bca', 'BcaB03g12119' => 'bca', 'BcaB03g12120' => 'bca', 'BcaB03g13945' => 'bca', 'BcaB04g17123' => 'bca', 'BcaB04g17867' => 'bca', 'BcaB04g19839' => 'bca', 'BcaB07g30317' => 'bca', 'BcaB07g32432' => 'bca', 'BcaB07g33362' => 'bca', 'BcaB08g36611' => 'bca', 'BcaC01g00028' => 'bca', 'BcaC01g01356' => 'bca', 'BcaC01g02034' => 'bca', 'BcaC01g06051' => 'bca', 'BcaC03g16839' => 'bca', 'BcaC03g17176' => 'bca', 'BcaC05g26829' => 'bca', 'BcaC06g31490' => 'bca', 'BcaC06g35344' => 'bca', 'BcaC06g36570' => 'bca', 'BcaC07g37537' => 'bca', 'BcaC08g43491' => 'bca', 'BcaC08g43773' => 'bca', 'BcaNung00234' => 'bca', 'BcaNung01982' => 'bca', 'BcaNung03707' => 'bca', 'BcaNung06454' => 'bca', 'BolC2t10762H' => 'bol', 'BolC2t11191H' => 'bol', 'BolC3t14322H' => 'bol', 'BolC3t19747H' => 'bol', 'BolC3t21425H' => 'bol', 'BolC4t27800H' => 'bol', 'BolC5t31423H' => 'bol', 'BolC6t35951H' => 'bol', 'BolC6t36282H' => 'bol', 'BolC7t40678H' => 'bol', 'BolC7t40679H' => 'bol', 'BolC7t42222H' => 'bol', 'BolC7t43492H' => 'bol', 'BolC7t46785H' => 'bol', 'BolC8t47853H' => 'bol', 'BolC9t56805H' => 'bol', 'BraA02t08000Z' => 'bra', 'BraA02t08341Z' => 'bra', 'BraA03t10936Z' => 'bra', 'BraA03t15657Z' => 'bra', 'BraA04t18100Z' => 'bra', 'BraA05t20523Z' => 'bra', 'BraA06t23353Z' => 'bra', 'BraA06t27473Z' => 'bra', 'BraA06t27769Z' => 'bra', 'BraA07t28928Z' => 'bra', 'BraA08t32236Z' => 'bra', 'BraA08t32841Z' => 'bra', 'BraA08t34524Z' => 'bra', 'BraA09t38742Z' => 'bra', 'BraA09t39295Z' => 'bra', 'C02p47180' => 'bna', 'C02p50990' => 'bna', 'C03p19360' => 'bna', 'C03p74950' => 'bna', 'C03p91000' => 'bna', 'C04p63260' => 'bna', 'C05p27050' => 'bna', 'C06p08750' => 'bna', 'C06p11490' => 'bna', 'C07p02820' => 'bna', 'C07p17180' => 'bna', 'C07p29440' => 'bna', 'C07p63730' => 'bna', 'C09p39260' => 'bna', 'CAN.G1164.34' => 'can', 'CAN.G1164.39' => 'can', 'CAN.G1530.3' => 'can', 'CAN.G162.61' => 'can', 'CAN.G176.6' => 'can', 'CAN.G289.49' => 'can', 'CAN.G370.21' => 'can', 'CAN.G370.22' => 'can', 'CAN.G371.117' => 'can', 'CAN.G58.37' => 'can', 'CAN.G588.98' => 'can', 'CANSAT21G2266' => 'cansat', 'CANSAT25G2799' => 'cansat', 'CANSAT35G0862' => 'cansat', 'CANSAT35G1704' => 'cansat', 'CANSAT35G1760' => 'cansat', 'CANSAT56G3971' => 'cansat', 'CANSAT56G4116' => 'cansat', 'CANSAT80G1259' => 'cansat', 'CARHR027730' => 'chi', 'CARHR033880' => 'chi', 'CARHR043270' => 'chi', 'CARHR145330' => 'chi', 'CARHR145340' => 'chi', 'CARHR175570' => 'chi', 'CARHR181570' => 'chi', 'CARHR258470' => 'chi', 'CARHR260490' => 'chi', 'CARHR294220' => 'chi', 'Carub.0001s2668' => 'cru', 'Carub.0001s3257' => 'cru', 'Carub.0001s4220' => 'cru', 'Carub.0005s0179' => 'cru', 'Carub.0006s2807' => 'cru', 'Carub.0007s0039' => 'cru', 'Carub.0008s0169' => 'cru', 'Carub.0008s0636' => 'cru', 'Ca_00338_v3' => 'car', 'Ca_00542_v3' => 'car', 'Ca_01844_v3' => 'car', 'Ca_10611_v3' => 'car', 'Ca_13326_v3' => 'car', 'Ca_17944_v3' => 'car', 'Ca_18546_v3' => 'car', 'Ca_24219_v3' => 'car', 'Ca_29972_v3' => 'car', 'CBR_g3681' => 'cbr', 'CBR_g40021' => 'cbr', 'Cc01_g08140' => 'ccan', 'Cc02_g13410' => 'ccan', 'Cc02_g37480' => 'ccan', 'Cc05_g12030' => 'ccan', 'Cc09_g03370' => 'ccan', 'Cc09_g10300' => 'ccan', 'Cc10_g03530' => 'ccan', 'Cc10_g11380' => 'ccan', 'CDE01G0176' => 'cde', 'CDE02G0675' => 'cde', 'CDE02G0942' => 'cde', 'CDE02G1153' => 'cde', 'CDE02G4177' => 'cde', 'CDE04G2117' => 'cde', 'CDE04G2736' => 'cde', 'CDE08G1161' => 'cde', 'CDE09G1238' => 'cde', 'Cfa000467' => 'cfa', 'Cfa000947' => 'cfa', 'Cfa004969' => 'cfa', 'Cfa005284' => 'cfa', 'Cfa008993' => 'cfa', 'Cfa018187' => 'cfa', 'Cfa018454' => 'cfa', 'Cfa020585' => 'cfa', 'Ciclev10000424m.g' => 'ccl', 'Ciclev10003605m.g' => 'ccl', 'Ciclev10007828m.g' => 'ccl', 'Ciclev10014620m.g' => 'ccl', 'Ciclev10015169m.g' => 'ccl', 'Ciclev10018291m.g' => 'ccl', 'Ciclev10028256m.g' => 'ccl', 'Ciclev10033822m.g' => 'ccl', 'CiPaw.05G060300' => 'cil', 'CiPaw.05G085000' => 'cil', 'CiPaw.06G083700' => 'cil', 'CiPaw.06G120300' => 'cil', 'CiPaw.09G060500' => 'cil', 'CiPaw.09G123800' => 'cil', 'CiPaw.11G169700' => 'cil', 'CiPaw.12G118300' => 'cil', 'CiPaw.15G071000' => 'cil', 'CiPaw.15G081900' => 'cil', 'ClCG01G024610' => 'cla', 'ClCG03G006070' => 'cla', 'ClCG05G019250' => 'cla', 'ClCG09G009500' => 'cla', 'ClCG11G008200' => 'cla', 'ClCG11G018080' => 'cla', 'COL.COLO4_17373' => 'col', 'COL.COLO4_22994' => 'col', 'COL.COLO4_26389' => 'col', 'COL.COLO4_27170' => 'col', 'COL.COLO4_31074' => 'col', 'COL.COLO4_31465' => 'col', 'COL.COLO4_36438' => 'col', 'COL.COLO4_36439' => 'col', 'Cpa.g.c38781' => 'cpa', 'Cpa.g.sc128.12' => 'cpa', 'Cpa.g.sc166.7' => 'cpa', 'Cpa.g.sc166.8' => 'cpa', 'Cpa.g.sc20.111' => 'cpa', 'Cpa.g.sc27.31' => 'cpa', 'Cpa.g.sc64.36' => 'cpa', 'Cpa.g.sc64.37' => 'cpa', 'Cpa.g.sc66.49' => 'cpa', 'Cpa.g.sc80.64' => 'cpa', 'CsaV3_1G012320' => 'csa', 'CsaV3_2G008480' => 'csa', 'CsaV3_2G033450' => 'csa', 'CsaV3_3G044830' => 'csa', 'CsaV3_4G033710' => 'csa', 'CsaV3_6G051730' => 'csa', 'CsaV3_7G025350' => 'csa', 'CSS0001067' => 'camsi', 'CSS0005996' => 'camsi', 'CSS0006590' => 'camsi', 'CSS0009673' => 'camsi', 'CSS0010201' => 'camsi', 'CSS0010549' => 'camsi', 'CSS0011364' => 'camsi', 'CSS0014473' => 'camsi', 'CSS0014961' => 'camsi', 'CSS0020191' => 'camsi', 'CSS0021165' => 'camsi', 'CSS0022306' => 'camsi', 'CSS0030591' => 'camsi', 'CSS0030696' => 'camsi', 'CSS0032653' => 'camsi', 'CSS0037487' => 'camsi', 'CSS0041102' => 'camsi', 'CSS0041261' => 'camsi', 'CSS0046246' => 'camsi', 'CSS0049256' => 'camsi', 'DCAR_004075' => 'dca', 'DCAR_011538' => 'dca', 'DCAR_019553' => 'dca', 'DCAR_020952' => 'dca', 'DCAR_021739' => 'dca', 'DCAR_027407' => 'dca', 'DCAR_027913' => 'dca', 'DCAR_028066' => 'dca', 'Dinv05899' => 'din', 'Dinv07563' => 'din', 'Dinv08010' => 'din', 'Dinv14125' => 'din', 'Dinv20172' => 'din', 'Dinv30743' => 'din', 'Dinv31229' => 'din', 'Dinv34162' => 'din', 'Dinv36028' => 'din', 'Dinv39368' => 'din', 'Dinv40565' => 'din', 'Dinv41706' => 'din', 'Duzib052G0089' => 'dzi', 'Duzib116G0641' => 'dzi', 'Duzib132G0069' => 'dzi', 'Duzib132G1219' => 'dzi', 'Duzib147G0278' => 'dzi', 'Duzib160G0480' => 'dzi', 'Duzib170G0661' => 'dzi', 'Duzib177G0591' => 'dzi', 'Duzib187G1353' => 'dzi', 'Duzib192G0858' => 'dzi', 'Duzib192G0883' => 'dzi', 'Duzib213G0506' => 'dzi', 'Duzib235G0289' => 'dzi', 'Duzib251G0422' => 'dzi', 'ECA232G3898' => 'eca', 'ECA233G5950' => 'eca', 'ECA234G1699' => 'eca', 'ECA234G2421' => 'eca', 'ECA236G0426' => 'eca', 'ECA236G4331' => 'eca', 'ECA248G2573' => 'eca', 'EL10Ac1g00077' => 'bvu', 'EL10Ac1g01746' => 'bvu', 'EL10Ac2g03464' => 'bvu', 'EL10Ac4g08176' => 'bvu', 'EL10Ac7g17521' => 'bvu', 'EL10Ac8g20386' => 'bvu', 'EL10Ac9g21343' => 'bvu', 'EL10Ac9g22688' => 'bvu', 'Eucgr.B03434' => 'egr', 'Eucgr.D00618' => 'egr', 'Eucgr.E02395' => 'egr', 'Eucgr.F01129' => 'egr', 'Eucgr.F02622' => 'egr', 'Eucgr.F04207' => 'egr', 'FAN01G0570' => 'fan', 'FAN03G3351' => 'fan', 'FAN06G3702' => 'fan', 'FAN07G2149' => 'fan', 'FAN10G3758' => 'fan', 'FAN11G1170' => 'fan', 'FAN11G2050' => 'fan', 'FAN11G2724' => 'fan', 'FAN12G1700' => 'fan', 'FAN12G2028' => 'fan', 'FAN15G1160' => 'fan', 'FAN15G3063' => 'fan', 'FAN16G2540' => 'fan', 'FAN16G3077' => 'fan', 'FAN16G3624' => 'fan', 'FAN17G0221' => 'fan', 'FAN20G2492' => 'fan', 'FAN20G2905' => 'fan', 'FAN21G0548' => 'fan', 'FAN21G1300' => 'fan', 'FAN22G0077' => 'fan', 'FAN22G1315' => 'fan', 'FAN24G1280' => 'fan', 'FAN24G1445' => 'fan', 'FAN24G3527' => 'fan', 'FAN25G0464' => 'fan', 'FAN25G2885' => 'fan', 'FAN25G3270' => 'fan', 'FAN27G1101' => 'fan', 'FAN27G2846' => 'fan', 'FAN27G3524' => 'fan', 'FvH4_2g11770' => 'fve', 'FvH4_2g15630' => 'fve', 'FvH4_3g05570' => 'fve', 'FvH4_3g09110' => 'fve', 'FvH4_3g19940' => 'fve', 'FvH4_4g04821' => 'fve', 'FvH4_4g31480' => 'fve', 'FvH4_7g01740' => 'fve', 'Glyma.05G130400' => 'gma', 'Glyma.05G156400' => 'gma', 'Glyma.07G197000' => 'gma', 'Glyma.08G085151' => 'gma', 'Glyma.08G114500' => 'gma', 'Glyma.08G300400' => 'gma', 'Glyma.10G215800' => 'gma', 'Glyma.12G224400' => 'gma', 'Glyma.13G179300' => 'gma', 'Glyma.13G218151' => 'gma', 'Glyma.13G238800' => 'gma', 'Glyma.13G276900' => 'gma', 'Glyma.14G078200' => 'gma', 'Glyma.15G074500' => 'gma', 'Glyma.15G094100' => 'gma', 'Glyma.17G247200' => 'gma', 'Glyma.18G120100' => 'gma', 'Glyma.20G176000' => 'gma', 'Gohir.A01G063600' => 'ghi', 'Gohir.A01G170301' => 'ghi', 'Gohir.A02G060500' => 'ghi', 'Gohir.A05G133850' => 'ghi', 'Gohir.A05G161400' => 'ghi', 'Gohir.A06G012900' => 'ghi', 'Gohir.A06G035901' => 'ghi', 'Gohir.A06G127100' => 'ghi', 'Gohir.A06G210500' => 'ghi', 'Gohir.A08G008650' => 'ghi', 'Gohir.A09G072700' => 'ghi', 'Gohir.A09G088301' => 'ghi', 'Gohir.A10G040600' => 'ghi', 'Gohir.A12G036300' => 'ghi', 'Gohir.A12G143350' => 'ghi', 'Gohir.A12G165500' => 'ghi', 'Gohir.A13G145700' => 'ghi', 'Gohir.D01G050000' => 'ghi', 'Gohir.D01G051366' => 'ghi', 'Gohir.D01G161350' => 'ghi', 'Gohir.D02G065900' => 'ghi', 'Gohir.D05G164200' => 'ghi', 'Gohir.D05G355500' => 'ghi', 'Gohir.D06G010400' => 'ghi', 'Gohir.D06G111250' => 'ghi', 'Gohir.D06G132000' => 'ghi', 'Gohir.D06G210500' => 'ghi', 'Gohir.D07G165675' => 'ghi', 'Gohir.D08G062240' => 'ghi', 'Gohir.D08G086101' => 'ghi', 'Gohir.D08G138060' => 'ghi', 'Gohir.D09G072300' => 'ghi', 'Gohir.D10G041400' => 'ghi', 'Gohir.D11G191020' => 'ghi', 'Gohir.D11G212066' => 'ghi', 'Gohir.D12G036300' => 'ghi', 'Gohir.D12G168600' => 'ghi', 'Gohir.D13G150600' => 'ghi', 'Gorai.001G057300' => 'gra', 'Gorai.002G069900' => 'gra', 'Gorai.002G200000' => 'gra', 'Gorai.003G067600' => 'gra', 'Gorai.005G074800' => 'gra', 'Gorai.006G087300' => 'gra', 'Gorai.008G037500' => 'gra', 'Gorai.008G181400' => 'gra', 'Gorai.009G169400' => 'gra', 'Gorai.009G387900' => 'gra', 'Gorai.010G013300' => 'gra', 'Gorai.010G153800' => 'gra', 'Gorai.010G255800' => 'gra', 'Gorai.011G043700' => 'gra', 'Gorai.011G198900' => 'gra', 'Gorai.013G168400' => 'gra', 'GSVIVG01005212001' => 'vvi', 'GSVIVG01006163001' => 'vvi', 'GSVIVG01009625001' => 'vvi', 'GSVIVG01014338001' => 'vvi', 'GSVIVG01020005001' => 'vvi', 'GSVIVG01021450001' => 'vvi', 'GSVIVG01023975001' => 'vvi', 'GSVIVG01034490001' => 'vvi', 'HanXRQChr04g0112071' => 'han', 'HanXRQChr05g0131151' => 'han', 'HanXRQChr09g0262371' => 'han', 'HanXRQChr09g0268401' => 'han', 'HanXRQChr10g0279241' => 'han', 'HanXRQChr10g0297961' => 'han', 'HanXRQChr11g0326231' => 'han', 'HanXRQChr11g0328471' => 'han', 'HanXRQChr16g0507941' => 'han', 'HanXRQChr17g0560211' => 'han', 'Haze_02108' => 'cav', 'Haze_02428' => 'cav', 'Haze_05593' => 'cav', 'Haze_06448' => 'cav', 'Haze_09427' => 'cav', 'Haze_12022' => 'cav', 'Haze_17612' => 'cav', 'Haze_17928' => 'cav', 'Hma1.2p1_0032F.1_g019250' => 'hma', 'Hma1.2p1_0163F.1_g072690' => 'hma', 'Hma1.2p1_0265F.1_g106710' => 'hma', 'Hma1.2p1_0286F.1_g113970' => 'hma', 'Hma1.2p1_0363F.1_g136640' => 'hma', 'Hma1.2p1_0584F.1_g183470' => 'hma', 'Hma1.2p1_0885F.1_g232570' => 'hma', 'HPP92_006022' => 'vpl', 'HPP92_007320' => 'vpl', 'HPP92_011521' => 'vpl', 'HPP92_019387' => 'vpl', 'HPP92_024038' => 'vpl', 'Hund05891' => 'sun', 'Hund06450' => 'sun', 'Hund12053' => 'sun', 'Hund16800' => 'sun', 'Hund21222' => 'sun', 'Hund22896' => 'sun', 'Hund23746' => 'sun', 'Hund27083' => 'sun', 'Lalb_Chr02g0141831' => 'lal', 'Lalb_Chr02g0141841' => 'lal', 'Lalb_Chr05g0220411' => 'lal', 'Lalb_Chr06g0162081' => 'lal', 'Lalb_Chr09g0327651' => 'lal', 'Lalb_Chr13g0295051' => 'lal', 'Lalb_Chr15g0086801' => 'lal', 'Lalb_Chr16g0383781' => 'lal', 'Lalb_Chr16g0383791' => 'lal', 'Lalb_Chr18g0055441' => 'lal', 'Lalb_Chr18g0059611' => 'lal', 'Lalb_Chr20g0109661' => 'lal', 'Lalb_Chr20g0109831' => 'lal', 'Lalb_Chr20g0121871' => 'lal', 'Lalb_Chr22g0355361' => 'lal', 'Lalb_Chr25g0286371' => 'lal', 'Lj1A1187G43' => 'lonja', 'Lj1A1205T50' => 'lonja', 'Lj1A800G33' => 'lonja', 'Lj1C1187T7' => 'lonja', 'Lj1C843T11' => 'lonja', 'Lj1g0010940' => 'lja', 'Lj2A288T69' => 'lonja', 'Lj3g0024276' => 'lja', 'Lj4A47T76' => 'lonja', 'Lj4g0005805' => 'lja', 'Lj4g0006097' => 'lja', 'Lj4g0008528' => 'lja', 'Lj4g0024907' => 'lja', 'Lj5g0012472' => 'lja', 'Lj5g0018648' => 'lja', 'Lj6C789G1' => 'lonja', 'Lj6g0004000' => 'lja', 'Lj7A292G67' => 'lonja', 'Lj7A292T64' => 'lonja', 'Lj9A400T58' => 'lonja', 'Lsat_1_v5_gn_1_126181' => 'lsa', 'Lsat_1_v5_gn_4_123041' => 'lsa', 'Lsat_1_v5_gn_4_133620' => 'lsa', 'Lsat_1_v5_gn_4_53221' => 'lsa', 'Lsat_1_v5_gn_4_71961' => 'lsa', 'Lsat_1_v5_gn_7_105241' => 'lsa', 'Lsat_1_v5_gn_7_21361' => 'lsa', 'Lsat_1_v5_gn_7_28860' => 'lsa', 'Lsat_1_v5_gn_7_31260' => 'lsa', 'Lsat_1_v5_gn_8_52801' => 'lsa', 'Manes.02G191400' => 'mes', 'Manes.03G110100' => 'mes', 'Manes.04G071100' => 'mes', 'Manes.05G100500' => 'mes', 'Manes.05G164700' => 'mes', 'Manes.15G087000' => 'mes', 'Manes.15G121500' => 'mes', 'Manes.16G028300' => 'mes', 'Manes.17G046100' => 'mes', 'Manes.17G069800' => 'mes', 'Manes.18G100500' => 'mes', 'Mapoly0002s0109' => 'mpo', 'Mapoly0024s0007' => 'mpo', 'Mapoly0089s0032' => 'mpo', 'MBI04_g42241_MAGBIO' => 'mbi', 'MBI05_g11988_MAGBIO' => 'mbi', 'MBI05_g35452_MAGBIO' => 'mbi', 'MBI07_g30179_MAGBIO' => 'mbi', 'MBI07_g35859_MAGBIO' => 'mbi', 'MBI07_g35860_MAGBIO' => 'mbi', 'MBI07_g37166_MAGBIO' => 'mbi', 'MBI08_g18172_MAGBIO' => 'mbi', 'MBI09_g08441_MAGBIO' => 'mbi', 'MBI13_g01676_MAGBIO' => 'mbi', 'MBI14_g42955_MAGBIO' => 'mbi', 'MBI16_g13161_MAGBIO' => 'mbi', 'MBI17_g27204_MAGBIO' => 'mbi', 'MBI19_g21595_MAGBIO' => 'mbi', 'MD00G1148400' => 'mdo', 'MD02G1301200' => 'mdo', 'MD03G1227800' => 'mdo', 'MD05G1041100' => 'mdo', 'MD05G1124800' => 'mdo', 'MD05G1284000' => 'mdo', 'MD05G1338800' => 'mdo', 'MD05G1338900' => 'mdo', 'MD07G1022800' => 'mdo', 'MD10G1047500' => 'mdo', 'MD10G1127500' => 'mdo', 'MD10G1262300' => 'mdo', 'MD10G1293800' => 'mdo', 'MD16G1074300' => 'mdo', 'Medtr1g021670' => 'mtr', 'Medtr1g096320' => 'mtr', 'Medtr2g013690' => 'mtr', 'Medtr2g019450' => 'mtr', 'Medtr2g085170' => 'mtr', 'Medtr4g088785' => 'mtr', 'Medtr8g055930' => 'mtr', 'Medtr8g085850' => 'mtr', 'MELO3C002605.2' => 'cme', 'MELO3C003891.2' => 'cme', 'MELO3C004012.2' => 'cme', 'MELO3C007134.2' => 'cme', 'MELO3C008118.2' => 'cme', 'MELO3C016700.2' => 'cme', 'MELO3C024127.2' => 'cme', 'MELO3C033361.2' => 'cme', 'MELO3C033362.2' => 'cme', 'Migut.C00430' => 'egut', 'Migut.C01246' => 'egut', 'Migut.E00101' => 'egut', 'Migut.H01486' => 'egut', 'Migut.H01939' => 'egut', 'Migut.K00360' => 'egut', 'Migut.M00910' => 'egut', 'Migut.M01139' => 'egut', 'Migut.N02677' => 'egut', 'MSTRG.13252' => 'ama', 'MSTRG.14701' => 'ama', 'MSTRG.1521' => 'ama', 'MSTRG.15884' => 'ama', 'MSTRG.16242' => 'ama', 'MSTRG.22285' => 'ama', 'MSTRG.22444' => 'ama', 'MSTRG.2349' => 'ama', 'MSTRG.26308' => 'ama', 'MSTRG.28296' => 'ama', 'MSTRG.9895' => 'ama', 'Nitab4.5_0000110g0060' => 'nta', 'Nitab4.5_0000420g0130' => 'nta', 'Nitab4.5_0000422g0030' => 'nta', 'Nitab4.5_0000560g0180' => 'nta', 'Nitab4.5_0000703g0100' => 'nta', 'Nitab4.5_0000786g0200' => 'nta', 'Nitab4.5_0001336g0020' => 'nta', 'Nitab4.5_0001796g0030' => 'nta', 'Nitab4.5_0003348g0060' => 'nta', 'Nitab4.5_0003698g0040' => 'nta', 'Nitab4.5_0003942g0090' => 'nta', 'Nitab4.5_0004775g0070' => 'nta', 'Nitab4.5_0004864g0030' => 'nta', 'Nitab4.5_0005615g0020' => 'nta', 'Nitab4.5_0009288g0030' => 'nta', 'Nitab4.5_0009341g0010' => 'nta', 'Nitab4.5_0009535g0010' => 'nta', 'Nn1g03995' => 'nnu', 'Nn1g04100' => 'nnu', 'Nn1g06530' => 'nnu', 'Nn3g16404' => 'nnu', 'Nn3g17212' => 'nnu', 'Nn3g20776' => 'nnu', 'Nn3g21923' => 'nnu', 'Nn5g27737' => 'nnu', 'Nn5g29461' => 'nnu', 'Nn7g38355' => 'nnu', 'Nn8g39873' => 'nnu', 'Oeu000548.2' => 'oeu', 'Oeu004672.1' => 'oeu', 'Oeu015605.2' => 'oeu', 'Oeu016092.1' => 'oeu', 'Oeu017879.3' => 'oeu', 'Oeu024910.1' => 'oeu', 'Oeu028965.1' => 'oeu', 'Oeu031269.1' => 'oeu', 'Oeu031270.1' => 'oeu', 'Oeu032535.1' => 'oeu', 'Oeu034151.1' => 'oeu', 'Oeu034152.1' => 'oeu', 'Oeu034588.2' => 'oeu', 'Oeu050846.1' => 'oeu', 'Oeu050849.2' => 'oeu', 'Oeu051063.2' => 'oeu', 'Oeu052368.1' => 'oeu', 'Oeu052370.1' => 'oeu', 'Os01g0210400' => 'osa', 'Os01g0304300' => 'osa', 'Os01g0749100' => 'osa', 'Os02g0745800' => 'osa', 'Os03g0769050' => 'osa', 'Os05g0531500' => 'osa', 'Os06g0724300' => 'osa', 'Os11g0198100' => 'osa', 'Peaxi162Scf00069g01425' => 'pax', 'Peaxi162Scf00280g00811' => 'pax', 'Peaxi162Scf00310g00615' => 'pax', 'Peaxi162Scf00362g00542' => 'pax', 'Peaxi162Scf00461g00310' => 'pax', 'Peaxi162Scf00530g00118' => 'pax', 'Peaxi162Scf00541g00057' => 'pax', 'Peaxi162Scf00661g00017' => 'pax', 'Peaxi162Scf00926g00027' => 'pax', 'Peaxi162Scf01064g00263' => 'pax', 'Peaxi162Scf01211g00135' => 'pax', 'PGR004G2336' => 'pgr', 'PGR042G0327' => 'pgr', 'PGR042G1957' => 'pgr', 'PGR042G2003' => 'pgr', 'PGR042G3929' => 'pgr', 'PGR083G1137' => 'pgr', 'PGR083G1364' => 'pgr', 'PGSC0003DMG400003381' => 'stu', 'PGSC0003DMG400003417' => 'stu', 'PGSC0003DMG400008981' => 'stu', 'PGSC0003DMG400012417' => 'stu', 'PGSC0003DMG400012823' => 'stu', 'PGSC0003DMG400016885' => 'stu', 'PGSC0003DMG400022812' => 'stu', 'PGSC0003DMG400029726' => 'stu', 'PGSC0003DMG401009243' => 'stu', 'PGSC0003DMG401031505' => 'stu', 'PGSC0003DMG402031505' => 'stu', 'Phvul.001G017600' => 'pvu', 'Phvul.002G193500' => 'pvu', 'Phvul.002G228900' => 'pvu', 'Phvul.002G236800' => 'pvu', 'Phvul.003G049500' => 'pvu', 'Phvul.005G072000' => 'pvu', 'Phvul.006G164800' => 'pvu', 'Phvul.006G185100' => 'pvu', 'Phvul.007G090000' => 'pvu', 'Potri.001G399800' => 'ptr', 'Potri.002G149900' => 'ptr', 'Potri.004G044100' => 'ptr', 'Potri.004G177600' => 'ptr', 'Potri.009G138000' => 'ptr', 'Potri.010G094000' => 'ptr', 'Potri.011G053000' => 'ptr', 'Potri.011G119300' => 'ptr', 'Potri.013G113700' => 'ptr', 'Potri.018G107800' => 'ptr', 'Potri.019G084100' => 'ptr', 'Pp3c14_23720' => 'ppa', 'Pp3c16_6340' => 'ppa', 'Pp3c23_13420' => 'ppa', 'Pp3c24_2740' => 'ppa', 'Pp3c25_860' => 'ppa', 'Pp3c8_21750' => 'ppa', 'Prupe.1G273000' => 'ppe', 'Prupe.1G273700' => 'ppe', 'Prupe.1G274100' => 'ppe', 'Prupe.2G023300' => 'ppe', 'Prupe.4G048000' => 'ppe', 'Prupe.4G080400' => 'ppe', 'Prupe.4G181200' => 'ppe', 'Prupe.8G056900' => 'ppe', 'Prupe.8G168700' => 'ppe', 'Psat1g189080' => 'psa', 'Psat1g204760' => 'psa', 'Psat4g175560' => 'psa', 'Psat4g177720' => 'psa', 'Psat5g244240' => 'psa', 'Psat6g010720' => 'psa', 'Psat6g187200' => 'psa', 'Psat7g072040' => 'psa', 'PSO017G3501' => 'pso', 'PSO063G2148' => 'pso', 'PSO063G5608' => 'pso', 'PSO210G6392' => 'pso', 'PSO541G2319' => 'pso', 'PSO541G2836' => 'pso', 'PSO541G4012' => 'pso', 'PSO541G6253' => 'pso', 'PSO675G0580' => 'pso', 'PSO675G0856' => 'pso', 'PSO675G5635' => 'pso', 'PSO675G9157' => 'pso', 'PSO832G1660' => 'pso', 'PSO832G1969' => 'pso', 'QL02p007186' => 'qlo', 'QL02p033904' => 'qlo', 'QL03p064391' => 'qlo', 'QL05p040593' => 'qlo', 'QL05p058242' => 'qlo', 'QL08p021825' => 'qlo', 'QL11p004981' => 'qlo', 'RcHm_v2.0_Chr1g0318301' => 'rch', 'RcHm_v2.0_Chr4g0418501' => 'rch', 'RcHm_v2.0_Chr4g0439971' => 'rch', 'RcHm_v2.0_Chr5g0008541' => 'rch', 'RcHm_v2.0_Chr5g0014101' => 'rch', 'RcHm_v2.0_Chr5g0014131' => 'rch', 'RcHm_v2.0_Chr5g0033621' => 'rch', 'RcHm_v2.0_Chr6g0272041' => 'rch', 'RcHm_v2.0_Chr6g0278831' => 'rch', 'Rhsim02G0130400' => 'rsi', 'Rhsim02G0171100' => 'rsi', 'Rhsim05G0053000' => 'rsi', 'Rhsim05G0053100' => 'rsi', 'Rhsim06G0096500' => 'rsi', 'Rhsim06G0096600' => 'rsi', 'Rhsim06G0199100' => 'rsi', 'Rhsim12G0062300' => 'rsi', 'Rhsim12G0062800' => 'rsi', 'Sabra02G0118600' => 'sbr', 'Sabra04G0027300' => 'sbr', 'Sabra04G0119500' => 'sbr', 'Sabra08G0112500' => 'sbr', 'Sabra11G0036800' => 'sbr', 'Sabra11G0103800' => 'sbr', 'Sabra13G0096300' => 'sbr', 'Sabra16G0262300' => 'sbr', 'Sabra18G0091700' => 'sbr', 'Sabra19G0095400' => 'sbr', 'SalBow6G3080' => 'sbo', 'SalBow7G1157' => 'sbo', 'SalBow7G2123' => 'sbo', 'SalBow7G2285' => 'sbo', 'SalBow7G3537' => 'sbo', 'SalBow8G2947' => 'sbo', 'SalBow8G4463' => 'sbo', 'SalBow8G5466' => 'sbo', 'Sc01g0001750' => 'sci', 'Sc02g0006640' => 'sci', 'Sc02g0006670' => 'sci', 'Sc04g0008220' => 'sci', 'Sc05g0006190' => 'sci', 'Sc08g0002760' => 'sci', 'Sc17g0006170' => 'sci', 'Sc22g0002050' => 'sci', 'Sc23g0001190' => 'sci', 'Sc24g0000980' => 'sci', 'Sed0006245' => 'sed', 'Sed0007543' => 'sed', 'Sed0009411' => 'sed', 'Sed0010765' => 'sed', 'Sed0012944' => 'sed', 'Sed0014682' => 'sed', 'Sed0016174' => 'sed', 'Sed0016796' => 'sed', 'Sed0020317' => 'sed', 'Sed0021467' => 'sed', 'SEGI_01316' => 'sgi', 'SEGI_03374' => 'sgi', 'SEGI_16265' => 'sgi', 'SEGI_18569' => 'sgi', 'SEGI_20351' => 'sgi', 'SEGI_26395' => 'sgi', 'SEGI_29469' => 'sgi', 'SEGI_34771' => 'sgi', 'SEGI_36769' => 'sgi', 'SEGI_37139' => 'sgi', 'SGA_v2.0_scaffold100G29687' => 'sas', 'SGA_v2.0_scaffold118G32472' => 'sas', 'SGA_v2.0_scaffold14G07051' => 'sas', 'SGA_v2.0_scaffold183G39845' => 'sas', 'SGA_v2.0_scaffold1G00174' => 'sas', 'SGA_v2.0_scaffold22G09714' => 'sas', 'SGA_v2.0_scaffold333G48992' => 'sas', 'SGA_v2.0_scaffold46G17491' => 'sas', 'SGA_v2.0_scaffold49G18294' => 'sas', 'SGA_v2.0_scaffold63G21658' => 'sas', 'SHI01741' => 'shi', 'SHI05771' => 'shi', 'SHI18077' => 'shi', 'SHI20525' => 'shi', 'SHI20527' => 'shi', 'SHI20528' => 'shi', 'SMO172G0185' => 'smo', 'SMO198G0020' => 'smo', 'SMO351G0006' => 'smo', 'SMO356G0118' => 'smo', 'SMO358G0296' => 'smo', 'SMO367G0079' => 'smo', 'SMO367G1277' => 'smo', 'Solyc01g014220.3' => 'sly', 'Solyc01g111770.2' => 'sly', 'Solyc02g078180.3' => 'sly', 'Solyc03g006430.3' => 'sly', 'Solyc03g006456.1' => 'sly', 'Solyc03g079860.2' => 'sly', 'Solyc04g079770.3' => 'sly', 'Solyc05g007430.4' => 'sly', 'Solyc07g063150.3' => 'sly', 'Solyc08g016620.3' => 'sly', 'Solyc09g057590.3' => 'sly', 'Solyc09g057600.1' => 'sly', 'Solyc10g009050.3' => 'sly', 'Solyc11g017420.2' => 'sly', 'Sopen01g053810' => 'spe', 'Sopen02g023040' => 'spe', 'Sopen03g002440' => 'spe', 'Sopen04g033350' => 'spe', 'Sopen05g003310' => 'spe', 'Sopen07g004050' => 'spe', 'Sopen07g031340' => 'spe', 'Sopen08g006990' => 'spe', 'Sopen10g004830' => 'spe', 'Sopen11g009370' => 'spe', 'Sp1g24450' => 'spa', 'Sp1g29670' => 'spa', 'Sp1g39600' => 'spa', 'Sp2g11080' => 'spa', 'Sp2g13970' => 'spa', 'Sp4g16130' => 'spa', 'Sp6g13080' => 'spa', 'Sp7g37270' => 'spa', 'TAR371G0065' => 'tar', 'TAR376G0340' => 'tar', 'TAR376G0435' => 'tar', 'TAR381G0002' => 'tar', 'TAR381G1236' => 'tar', 'TAR624G0055' => 'tar', 'TAR624G0324' => 'tar', 'TAR624G0696' => 'tar', 'TAR624G0906' => 'tar', 'TAR625G0107' => 'tar', 'TAR626G0015' => 'tar', 'TAR626G1356' => 'tar', 'TAR627G0888' => 'tar', 'TAR628G0399' => 'tar', 'TAR628G1327' => 'tar', 'TAR629G2831' => 'tar', 'TAR629G2874' => 'tar', 'TAR633G1432' => 'tar', 'TAR633G2771' => 'tar', 'THA.LOC104803394' => 'tha', 'THA.LOC104805153' => 'tha', 'THA.LOC104806784' => 'tha', 'THA.LOC104810473' => 'tha', 'THA.LOC104813100' => 'tha', 'THA.LOC104814215' => 'tha', 'THA.LOC104815554' => 'tha', 'THA.LOC104820544' => 'tha', 'THA.LOC104824754' => 'tha', 'THA.LOC104827717' => 'tha', 'Thecc.02G031400' => 'tca', 'Thecc.02G055900' => 'tca', 'Thecc.02G350800' => 'tca', 'Thecc.06G150900' => 'tca', 'Thecc.06G186600' => 'tca', 'Thecc.07G089600' => 'tca', 'Thecc.08G020400' => 'tca', 'Thecc.08G182100' => 'tca', 'Thhalv10000873m.g' => 'esa', 'Thhalv10004185m.g' => 'esa', 'Thhalv10006981m.g' => 'esa', 'Thhalv10007204m.g' => 'esa', 'Thhalv10011374m.g' => 'esa', 'Thhalv10013482m.g' => 'esa', 'Thhalv10017801m.g' => 'esa', 'Thhalv10024983m.g' => 'esa', 'TPR.G12072' => 'tpr', 'TPR.G15769' => 'tpr', 'TPR.G16504' => 'tpr', 'TPR.G16506' => 'tpr', 'TPR.G24345' => 'tpr', 'TPR.G26666' => 'tpr', 'TPR.G27320' => 'tpr', 'TPR.G31819' => 'tpr', 'TPR.G38879' => 'tpr', 'TPR.G39015' => 'tpr', 'TPR.G8819' => 'tpr', 'TWI09G0924' => 'twi', 'TWI12G0811' => 'twi', 'TWI12G1294' => 'twi', 'TWI31G0150' => 'twi', 'TWI36G1262' => 'twi', 'TWI38G1287' => 'twi', 'TWI38G1633' => 'twi', 'TWI38G1982' => 'twi', 'TWI39G0116' => 'twi', 'TWI60G1011' => 'twi', 'TWI63G0171' => 'twi', 'TWI73G0839' => 'twi', 'TWI79G1511' => 'twi', 'unitig_0.g915' => 'ugi', 'unitig_0.g916' => 'ugi', 'unitig_21.g20219' => 'ugi', 'unitig_21.g20416' => 'ugi', 'unitig_578.g16132' => 'ugi', 'unitig_578.g16718' => 'ugi', 'unitig_62.g23481' => 'ugi', 'unitig_744.g24535' => 'ugi', 'unitig_749.g13525' => 'ugi', 'vmacro01248' => 'vma', 'vmacro02290' => 'vma', 'vmacro10946' => 'vma', 'vmacro11865' => 'vma', 'vmacro12493' => 'vma', 'vmacro17322' => 'vma', 'vmacro21599' => 'vma', 'vmacro23041' => 'vma', 'VMungo0251G0004' => 'vmu', 'VMungo0251G2639' => 'vmu', 'VMungo0251G2967' => 'vmu', 'VMungo0540G0864' => 'vmu', 'VMungo0540G1569' => 'vmu', 'VMungo0647G0317' => 'vmu', 'VMungo0720G1373' => 'vmu', 'VMungo0720G1508' => 'vmu', 'VMungo1080G0485' => 'vmu', 'VMungo1215G3177' => 'vmu', 'Zm00001eb112600' => 'zma', 'Zm00001eb120220' => 'zma', 'Zm00001eb153240' => 'zma', 'Zm00001eb168880' => 'zma', 'Zm00001eb213920' => 'zma', 'Zm00001eb228280' => 'zma', 'Zm00001eb254580' => 'zma', 'Zm00001eb272180' => 'zma', 'Zm00001eb293190' => 'zma', 'Zm00001eb322930' => 'zma', 'Zm00001eb353360' => 'zma', 'Zm00001eb353390' => 'zma', 'Zm00001eb353430' => 'zma', 'Zm00001eb353440' => 'zma', 'Zm00001eb353780' => 'zma' ) $gf_id = 'HOM05D000499' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000499' ) $data_identifier = 'HOM05D000499' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 29, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 12, 'amhyb' => (int) 8, 'aly' => (int) 12, 'aox' => (int) 9, 'arhy' => (int) 26, 'ath' => (int) 8, 'atr' => (int) 7, 'acertr' => (int) 10, 'cqu' => (int) 15, 'bca' => (int) 29, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 11, 'cansat' => (int) 8, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 9, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 8, 'cpa' => (int) 10, 'csa' => (int) 7, 'camsi' => (int) 20, 'dca' => (int) 8, 'din' => (int) 12, 'dzi' => (int) 14, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 6, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 38, 'gra' => (int) 16, 'vvi' => (int) 8, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 5, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 11, 'lja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 11, 'mpo' => (int) 3, 'mbi' => (int) 14, 'mdo' => (int) 14, 'mtr' => (int) 8, 'cme' => (int) 9, 'egut' => (int) 9, 'ama' => (int) 11, 'nta' => (int) 17, 'nnu' => (int) 11, 'oeu' => (int) 18, 'osa' => (int) 8, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 6, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 9, 'rsi' => (int) 9, 'sbr' => (int) 10, 'sbo' => (int) 8, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 10, 'sas' => (int) 10, 'shi' => (int) 6, 'smo' => (int) 7, 'sly' => (int) 14, 'spe' => (int) 10, 'spa' => (int) 8, 'tar' => (int) 19, 'tha' => (int) 10, 'tca' => (int) 8, 'esa' => (int) 8, 'tpr' => (int) 11, 'twi' => (int) 13, 'ugi' => (int) 9, 'vma' => (int) 8, 'vmu' => (int) 10, 'zma' => (int) 15 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb353780' $species_info = array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ) $local_species = 'vvi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000499', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1066', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p29780' => 'bna', 'A02p33180' => 'bna', 'A03p16470' => 'bna', 'A03p66010' => 'bna', 'A04p25970' => 'bna', 'A06p01270' => 'bna', 'A06p46080' => 'bna', 'A07p11400' => 'bna', 'A08p01840' => 'bna', 'A08p08230' => 'bna', 'A08p25740' => 'bna', 'A09p32070' => 'bna', 'A09p37830' => 'bna', 'A09p42840' => 'bna', 'A09p42850' => 'bna', 'Aa31LG10G2060' => 'aar', 'Aa31LG2G7410' => 'aar', 'Aa31LG6G10200' => 'aar', 'Aa31LG6G16680' => 'aar', 'Aa31LG6G8470' => 'aar', 'Aa31LG9G12730' => 'aar', 'Aa31LG9G13680' => 'aar', 'Aa31LG9G14920' => 'aar', 'Aa31LG9G6650' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4977' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5467' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3254' => 'aag', 'Actinidia02578' => 'ach', 'Actinidia07693' => 'ach', 'Actinidia08413' => 'ach', 'Actinidia08414' => 'ach', 'Actinidia15289' => 'ach', 'Actinidia19871' => 'ach', 'Actinidia21475' => 'ach', 'Actinidia22576' => 'ach', 'Actinidia28327' => 'ach', 'Actinidia32491' => 'ach', 'Actinidia39463' => 'ach', 'Actinidia39571' => 'ach', 'Ah.01g013750' => 'amhyb', 'Ah.01g023210' => 'amhyb', 'Ah.04g164850' => 'amhyb', 'Ah.05g178060' => 'amhyb', 'Ah.07g204270' => 'amhyb', 'Ah.07g208480' => 'amhyb', 'Ah.09g237410' => 'amhyb', 'Ah.14g089460' => 'amhyb', 'AL1G41790' => 'aly', 'AL1G49050' => 'aly', 'AL1G53810' => 'aly', 'AL1G61400' => 'aly', 'AL4G18580' => 'aly', 'AL5G12510' => 'aly', 'AL5G12540' => 'aly', 'AL6G43230' => 'aly', 'AL7G10370' => 'aly', 'AL7G19250' => 'aly', 'AL8G12240' => 'aly', 'AL8G18540' => 'aly', 'Aqoxy1G02409' => 'aox', 'Aqoxy2G03993' => 'aox', 'Aqoxy3G03357' => 'aox', 'Aqoxy4G00785' => 'aox', 'Aqoxy5G02598' => 'aox', 'Aqoxy6G00132' => 'aox', 'Aqoxy7G01776' => 'aox', 'Aqoxy7G02316' => 'aox', 'Aqoxy7G03973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.12AFKW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B8730' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27IQR1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3F75VG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3RE0GA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41TCQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.527VTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FIR39' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5W8UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DA38EV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ63HS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H1I32C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HC27T5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4M8AP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7N3CZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9UVDZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LS1NQA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT1D4B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SKC4TM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCFV76' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF9Q1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQWD9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1ZM88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WE07RT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YCK7VH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJE6Q6' => 'arhy', 'AT1G28240' => 'ath', 'AT1G34550' => 'ath', 'AT1G53040' => 'ath', 'AT2G02910' => 'ath', 'AT4G09630' => 'ath', 'AT4G38500' => 'ath', 'AT5G42660' => 'ath', 'AT5G46220' => 'ath', 'ATR0152G026' => 'atr', 'ATR0564G343' => 'atr', 'ATR0706G151' => 'atr', 'ATR0733G207' => 'atr', 'ATR0751G234' => 'atr', 'ATR0807G048' => 'atr', 'ATR1091G084' => 'atr', 'Atru.chr10.1229' => 'acertr', 'Atru.chr10.1230' => 'acertr', 'Atru.chr10.1874' => 'acertr', 'Atru.chr11.1808' => 'acertr', 'Atru.chr13.1795' => 'acertr', 'Atru.chr13.570' => 'acertr', 'Atru.chr2.2608' => 'acertr', 'Atru.chr2.2609' => 'acertr', 'Atru.chr5.3428' => 'acertr', 'Atru.chr8.1171' => 'acertr', 'AUR62004651' => 'cqu', 'AUR62008675' => 'cqu', 'AUR62010014' => 'cqu', 'AUR62013004' => 'cqu', 'AUR62014825' => 'cqu', 'AUR62015015' => 'cqu', 'AUR62015151' => 'cqu', 'AUR62017020' => 'cqu', 'AUR62019422' => 'cqu', 'AUR62023570' => 'cqu', 'AUR62025571' => 'cqu', 'AUR62029098' => 'cqu', 'AUR62033863' => 'cqu', 'AUR62034296' => 'cqu', 'AUR62040075' => 'cqu', 'BcaB02g07334' => 'bca', 'BcaB02g10575' => 'bca', 'BcaB03g12119' => 'bca', 'BcaB03g12120' => 'bca', 'BcaB03g13945' => 'bca', 'BcaB04g17123' => 'bca', 'BcaB04g17867' => 'bca', 'BcaB04g19839' => 'bca', 'BcaB07g30317' => 'bca', 'BcaB07g32432' => 'bca', 'BcaB07g33362' => 'bca', 'BcaB08g36611' => 'bca', 'BcaC01g00028' => 'bca', 'BcaC01g01356' => 'bca', 'BcaC01g02034' => 'bca', 'BcaC01g06051' => 'bca', 'BcaC03g16839' => 'bca', 'BcaC03g17176' => 'bca', 'BcaC05g26829' => 'bca', 'BcaC06g31490' => 'bca', 'BcaC06g35344' => 'bca', 'BcaC06g36570' => 'bca', 'BcaC07g37537' => 'bca', 'BcaC08g43491' => 'bca', 'BcaC08g43773' => 'bca', 'BcaNung00234' => 'bca', 'BcaNung01982' => 'bca', 'BcaNung03707' => 'bca', 'BcaNung06454' => 'bca', 'BolC2t10762H' => 'bol', 'BolC2t11191H' => 'bol', 'BolC3t14322H' => 'bol', 'BolC3t19747H' => 'bol', 'BolC3t21425H' => 'bol', 'BolC4t27800H' => 'bol', 'BolC5t31423H' => 'bol', 'BolC6t35951H' => 'bol', 'BolC6t36282H' => 'bol', 'BolC7t40678H' => 'bol', 'BolC7t40679H' => 'bol', 'BolC7t42222H' => 'bol', 'BolC7t43492H' => 'bol', 'BolC7t46785H' => 'bol', 'BolC8t47853H' => 'bol', 'BolC9t56805H' => 'bol', 'BraA02t08000Z' => 'bra', 'BraA02t08341Z' => 'bra', 'BraA03t10936Z' => 'bra', 'BraA03t15657Z' => 'bra', 'BraA04t18100Z' => 'bra', 'BraA05t20523Z' => 'bra', 'BraA06t23353Z' => 'bra', 'BraA06t27473Z' => 'bra', 'BraA06t27769Z' => 'bra', 'BraA07t28928Z' => 'bra', 'BraA08t32236Z' => 'bra', 'BraA08t32841Z' => 'bra', 'BraA08t34524Z' => 'bra', 'BraA09t38742Z' => 'bra', 'BraA09t39295Z' => 'bra', 'C02p47180' => 'bna', 'C02p50990' => 'bna', 'C03p19360' => 'bna', 'C03p74950' => 'bna', 'C03p91000' => 'bna', 'C04p63260' => 'bna', 'C05p27050' => 'bna', 'C06p08750' => 'bna', 'C06p11490' => 'bna', 'C07p02820' => 'bna', 'C07p17180' => 'bna', 'C07p29440' => 'bna', 'C07p63730' => 'bna', 'C09p39260' => 'bna', 'CAN.G1164.34' => 'can', 'CAN.G1164.39' => 'can', 'CAN.G1530.3' => 'can', 'CAN.G162.61' => 'can', 'CAN.G176.6' => 'can', 'CAN.G289.49' => 'can', 'CAN.G370.21' => 'can', 'CAN.G370.22' => 'can', 'CAN.G371.117' => 'can', 'CAN.G58.37' => 'can', 'CAN.G588.98' => 'can', 'CANSAT21G2266' => 'cansat', 'CANSAT25G2799' => 'cansat', 'CANSAT35G0862' => 'cansat', 'CANSAT35G1704' => 'cansat', 'CANSAT35G1760' => 'cansat', 'CANSAT56G3971' => 'cansat', 'CANSAT56G4116' => 'cansat', 'CANSAT80G1259' => 'cansat', 'CARHR027730' => 'chi', 'CARHR033880' => 'chi', 'CARHR043270' => 'chi', 'CARHR145330' => 'chi', 'CARHR145340' => 'chi', 'CARHR175570' => 'chi', 'CARHR181570' => 'chi', 'CARHR258470' => 'chi', 'CARHR260490' => 'chi', 'CARHR294220' => 'chi', 'Carub.0001s2668' => 'cru', 'Carub.0001s3257' => 'cru', 'Carub.0001s4220' => 'cru', 'Carub.0005s0179' => 'cru', 'Carub.0006s2807' => 'cru', 'Carub.0007s0039' => 'cru', 'Carub.0008s0169' => 'cru', 'Carub.0008s0636' => 'cru', 'Ca_00338_v3' => 'car', 'Ca_00542_v3' => 'car', 'Ca_01844_v3' => 'car', 'Ca_10611_v3' => 'car', 'Ca_13326_v3' => 'car', 'Ca_17944_v3' => 'car', 'Ca_18546_v3' => 'car', 'Ca_24219_v3' => 'car', 'Ca_29972_v3' => 'car', 'CBR_g3681' => 'cbr', 'CBR_g40021' => 'cbr', 'Cc01_g08140' => 'ccan', 'Cc02_g13410' => 'ccan', 'Cc02_g37480' => 'ccan', 'Cc05_g12030' => 'ccan', 'Cc09_g03370' => 'ccan', 'Cc09_g10300' => 'ccan', 'Cc10_g03530' => 'ccan', 'Cc10_g11380' => 'ccan', 'CDE01G0176' => 'cde', 'CDE02G0675' => 'cde', 'CDE02G0942' => 'cde', 'CDE02G1153' => 'cde', 'CDE02G4177' => 'cde', 'CDE04G2117' => 'cde', 'CDE04G2736' => 'cde', 'CDE08G1161' => 'cde', 'CDE09G1238' => 'cde', 'Cfa000467' => 'cfa', 'Cfa000947' => 'cfa', 'Cfa004969' => 'cfa', 'Cfa005284' => 'cfa', 'Cfa008993' => 'cfa', 'Cfa018187' => 'cfa', 'Cfa018454' => 'cfa', 'Cfa020585' => 'cfa', 'Ciclev10000424m.g' => 'ccl', 'Ciclev10003605m.g' => 'ccl', 'Ciclev10007828m.g' => 'ccl', 'Ciclev10014620m.g' => 'ccl', 'Ciclev10015169m.g' => 'ccl', 'Ciclev10018291m.g' => 'ccl', 'Ciclev10028256m.g' => 'ccl', 'Ciclev10033822m.g' => 'ccl', 'CiPaw.05G060300' => 'cil', 'CiPaw.05G085000' => 'cil', 'CiPaw.06G083700' => 'cil', 'CiPaw.06G120300' => 'cil', 'CiPaw.09G060500' => 'cil', 'CiPaw.09G123800' => 'cil', 'CiPaw.11G169700' => 'cil', 'CiPaw.12G118300' => 'cil', 'CiPaw.15G071000' => 'cil', 'CiPaw.15G081900' => 'cil', 'ClCG01G024610' => 'cla', 'ClCG03G006070' => 'cla', 'ClCG05G019250' => 'cla', 'ClCG09G009500' => 'cla', 'ClCG11G008200' => 'cla', 'ClCG11G018080' => 'cla', 'COL.COLO4_17373' => 'col', 'COL.COLO4_22994' => 'col', 'COL.COLO4_26389' => 'col', 'COL.COLO4_27170' => 'col', 'COL.COLO4_31074' => 'col', 'COL.COLO4_31465' => 'col', 'COL.COLO4_36438' => 'col', 'COL.COLO4_36439' => 'col', 'Cpa.g.c38781' => 'cpa', 'Cpa.g.sc128.12' => 'cpa', 'Cpa.g.sc166.7' => 'cpa', 'Cpa.g.sc166.8' => 'cpa', 'Cpa.g.sc20.111' => 'cpa', 'Cpa.g.sc27.31' => 'cpa', 'Cpa.g.sc64.36' => 'cpa', 'Cpa.g.sc64.37' => 'cpa', 'Cpa.g.sc66.49' => 'cpa', 'Cpa.g.sc80.64' => 'cpa', 'CsaV3_1G012320' => 'csa', 'CsaV3_2G008480' => 'csa', 'CsaV3_2G033450' => 'csa', 'CsaV3_3G044830' => 'csa', 'CsaV3_4G033710' => 'csa', 'CsaV3_6G051730' => 'csa', 'CsaV3_7G025350' => 'csa', 'CSS0001067' => 'camsi', 'CSS0005996' => 'camsi', 'CSS0006590' => 'camsi', 'CSS0009673' => 'camsi', 'CSS0010201' => 'camsi', 'CSS0010549' => 'camsi', 'CSS0011364' => 'camsi', 'CSS0014473' => 'camsi', 'CSS0014961' => 'camsi', 'CSS0020191' => 'camsi', 'CSS0021165' => 'camsi', 'CSS0022306' => 'camsi', 'CSS0030591' => 'camsi', 'CSS0030696' => 'camsi', 'CSS0032653' => 'camsi', 'CSS0037487' => 'camsi', 'CSS0041102' => 'camsi', 'CSS0041261' => 'camsi', 'CSS0046246' => 'camsi', 'CSS0049256' => 'camsi', 'DCAR_004075' => 'dca', 'DCAR_011538' => 'dca', 'DCAR_019553' => 'dca', 'DCAR_020952' => 'dca', 'DCAR_021739' => 'dca', 'DCAR_027407' => 'dca', 'DCAR_027913' => 'dca', 'DCAR_028066' => 'dca', 'Dinv05899' => 'din', 'Dinv07563' => 'din', 'Dinv08010' => 'din', 'Dinv14125' => 'din', 'Dinv20172' => 'din', 'Dinv30743' => 'din', 'Dinv31229' => 'din', 'Dinv34162' => 'din', 'Dinv36028' => 'din', 'Dinv39368' => 'din', 'Dinv40565' => 'din', 'Dinv41706' => 'din', 'Duzib052G0089' => 'dzi', 'Duzib116G0641' => 'dzi', 'Duzib132G0069' => 'dzi', 'Duzib132G1219' => 'dzi', 'Duzib147G0278' => 'dzi', 'Duzib160G0480' => 'dzi', 'Duzib170G0661' => 'dzi', 'Duzib177G0591' => 'dzi', 'Duzib187G1353' => 'dzi', 'Duzib192G0858' => 'dzi', 'Duzib192G0883' => 'dzi', 'Duzib213G0506' => 'dzi', 'Duzib235G0289' => 'dzi', 'Duzib251G0422' => 'dzi', 'ECA232G3898' => 'eca', 'ECA233G5950' => 'eca', 'ECA234G1699' => 'eca', 'ECA234G2421' => 'eca', 'ECA236G0426' => 'eca', 'ECA236G4331' => 'eca', 'ECA248G2573' => 'eca', 'EL10Ac1g00077' => 'bvu', 'EL10Ac1g01746' => 'bvu', 'EL10Ac2g03464' => 'bvu', 'EL10Ac4g08176' => 'bvu', 'EL10Ac7g17521' => 'bvu', 'EL10Ac8g20386' => 'bvu', 'EL10Ac9g21343' => 'bvu', 'EL10Ac9g22688' => 'bvu', 'Eucgr.B03434' => 'egr', 'Eucgr.D00618' => 'egr', 'Eucgr.E02395' => 'egr', 'Eucgr.F01129' => 'egr', 'Eucgr.F02622' => 'egr', 'Eucgr.F04207' => 'egr', 'FAN01G0570' => 'fan', 'FAN03G3351' => 'fan', 'FAN06G3702' => 'fan', 'FAN07G2149' => 'fan', 'FAN10G3758' => 'fan', 'FAN11G1170' => 'fan', 'FAN11G2050' => 'fan', 'FAN11G2724' => 'fan', 'FAN12G1700' => 'fan', 'FAN12G2028' => 'fan', 'FAN15G1160' => 'fan', 'FAN15G3063' => 'fan', 'FAN16G2540' => 'fan', 'FAN16G3077' => 'fan', 'FAN16G3624' => 'fan', 'FAN17G0221' => 'fan', 'FAN20G2492' => 'fan', 'FAN20G2905' => 'fan', 'FAN21G0548' => 'fan', 'FAN21G1300' => 'fan', 'FAN22G0077' => 'fan', 'FAN22G1315' => 'fan', 'FAN24G1280' => 'fan', 'FAN24G1445' => 'fan', 'FAN24G3527' => 'fan', 'FAN25G0464' => 'fan', 'FAN25G2885' => 'fan', 'FAN25G3270' => 'fan', 'FAN27G1101' => 'fan', 'FAN27G2846' => 'fan', 'FAN27G3524' => 'fan', 'FvH4_2g11770' => 'fve', 'FvH4_2g15630' => 'fve', 'FvH4_3g05570' => 'fve', 'FvH4_3g09110' => 'fve', 'FvH4_3g19940' => 'fve', 'FvH4_4g04821' => 'fve', 'FvH4_4g31480' => 'fve', 'FvH4_7g01740' => 'fve', 'Glyma.05G130400' => 'gma', 'Glyma.05G156400' => 'gma', 'Glyma.07G197000' => 'gma', 'Glyma.08G085151' => 'gma', 'Glyma.08G114500' => 'gma', 'Glyma.08G300400' => 'gma', 'Glyma.10G215800' => 'gma', 'Glyma.12G224400' => 'gma', 'Glyma.13G179300' => 'gma', 'Glyma.13G218151' => 'gma', 'Glyma.13G238800' => 'gma', 'Glyma.13G276900' => 'gma', 'Glyma.14G078200' => 'gma', 'Glyma.15G074500' => 'gma', 'Glyma.15G094100' => 'gma', 'Glyma.17G247200' => 'gma', 'Glyma.18G120100' => 'gma', 'Glyma.20G176000' => 'gma', 'Gohir.A01G063600' => 'ghi', 'Gohir.A01G170301' => 'ghi', 'Gohir.A02G060500' => 'ghi', 'Gohir.A05G133850' => 'ghi', 'Gohir.A05G161400' => 'ghi', 'Gohir.A06G012900' => 'ghi', 'Gohir.A06G035901' => 'ghi', 'Gohir.A06G127100' => 'ghi', 'Gohir.A06G210500' => 'ghi', 'Gohir.A08G008650' => 'ghi', 'Gohir.A09G072700' => 'ghi', 'Gohir.A09G088301' => 'ghi', 'Gohir.A10G040600' => 'ghi', 'Gohir.A12G036300' => 'ghi', 'Gohir.A12G143350' => 'ghi', 'Gohir.A12G165500' => 'ghi', 'Gohir.A13G145700' => 'ghi', 'Gohir.D01G050000' => 'ghi', 'Gohir.D01G051366' => 'ghi', 'Gohir.D01G161350' => 'ghi', 'Gohir.D02G065900' => 'ghi', 'Gohir.D05G164200' => 'ghi', 'Gohir.D05G355500' => 'ghi', 'Gohir.D06G010400' => 'ghi', 'Gohir.D06G111250' => 'ghi', 'Gohir.D06G132000' => 'ghi', 'Gohir.D06G210500' => 'ghi', 'Gohir.D07G165675' => 'ghi', 'Gohir.D08G062240' => 'ghi', 'Gohir.D08G086101' => 'ghi', 'Gohir.D08G138060' => 'ghi', 'Gohir.D09G072300' => 'ghi', 'Gohir.D10G041400' => 'ghi', 'Gohir.D11G191020' => 'ghi', 'Gohir.D11G212066' => 'ghi', 'Gohir.D12G036300' => 'ghi', 'Gohir.D12G168600' => 'ghi', 'Gohir.D13G150600' => 'ghi', 'Gorai.001G057300' => 'gra', 'Gorai.002G069900' => 'gra', 'Gorai.002G200000' => 'gra', 'Gorai.003G067600' => 'gra', 'Gorai.005G074800' => 'gra', 'Gorai.006G087300' => 'gra', 'Gorai.008G037500' => 'gra', 'Gorai.008G181400' => 'gra', 'Gorai.009G169400' => 'gra', 'Gorai.009G387900' => 'gra', 'Gorai.010G013300' => 'gra', 'Gorai.010G153800' => 'gra', 'Gorai.010G255800' => 'gra', 'Gorai.011G043700' => 'gra', 'Gorai.011G198900' => 'gra', 'Gorai.013G168400' => 'gra', 'GSVIVG01005212001' => 'vvi', 'GSVIVG01006163001' => 'vvi', 'GSVIVG01009625001' => 'vvi', 'GSVIVG01014338001' => 'vvi', 'GSVIVG01020005001' => 'vvi', 'GSVIVG01021450001' => 'vvi', 'GSVIVG01023975001' => 'vvi', 'GSVIVG01034490001' => 'vvi', 'HanXRQChr04g0112071' => 'han', 'HanXRQChr05g0131151' => 'han', 'HanXRQChr09g0262371' => 'han', 'HanXRQChr09g0268401' => 'han', 'HanXRQChr10g0279241' => 'han', 'HanXRQChr10g0297961' => 'han', 'HanXRQChr11g0326231' => 'han', 'HanXRQChr11g0328471' => 'han', 'HanXRQChr16g0507941' => 'han', 'HanXRQChr17g0560211' => 'han', 'Haze_02108' => 'cav', 'Haze_02428' => 'cav', 'Haze_05593' => 'cav', 'Haze_06448' => 'cav', 'Haze_09427' => 'cav', 'Haze_12022' => 'cav', 'Haze_17612' => 'cav', 'Haze_17928' => 'cav', 'Hma1.2p1_0032F.1_g019250' => 'hma', 'Hma1.2p1_0163F.1_g072690' => 'hma', 'Hma1.2p1_0265F.1_g106710' => 'hma', 'Hma1.2p1_0286F.1_g113970' => 'hma', 'Hma1.2p1_0363F.1_g136640' => 'hma', 'Hma1.2p1_0584F.1_g183470' => 'hma', 'Hma1.2p1_0885F.1_g232570' => 'hma', 'HPP92_006022' => 'vpl', 'HPP92_007320' => 'vpl', 'HPP92_011521' => 'vpl', 'HPP92_019387' => 'vpl', 'HPP92_024038' => 'vpl', 'Hund05891' => 'sun', 'Hund06450' => 'sun', 'Hund12053' => 'sun', 'Hund16800' => 'sun', 'Hund21222' => 'sun', 'Hund22896' => 'sun', 'Hund23746' => 'sun', 'Hund27083' => 'sun', 'Lalb_Chr02g0141831' => 'lal', 'Lalb_Chr02g0141841' => 'lal', 'Lalb_Chr05g0220411' => 'lal', 'Lalb_Chr06g0162081' => 'lal', 'Lalb_Chr09g0327651' => 'lal', 'Lalb_Chr13g0295051' => 'lal', 'Lalb_Chr15g0086801' => 'lal', 'Lalb_Chr16g0383781' => 'lal', 'Lalb_Chr16g0383791' => 'lal', 'Lalb_Chr18g0055441' => 'lal', 'Lalb_Chr18g0059611' => 'lal', 'Lalb_Chr20g0109661' => 'lal', 'Lalb_Chr20g0109831' => 'lal', 'Lalb_Chr20g0121871' => 'lal', 'Lalb_Chr22g0355361' => 'lal', 'Lalb_Chr25g0286371' => 'lal', 'Lj1A1187G43' => 'lonja', 'Lj1A1205T50' => 'lonja', 'Lj1A800G33' => 'lonja', 'Lj1C1187T7' => 'lonja', 'Lj1C843T11' => 'lonja', 'Lj1g0010940' => 'lja', 'Lj2A288T69' => 'lonja', 'Lj3g0024276' => 'lja', 'Lj4A47T76' => 'lonja', 'Lj4g0005805' => 'lja', 'Lj4g0006097' => 'lja', 'Lj4g0008528' => 'lja', 'Lj4g0024907' => 'lja', 'Lj5g0012472' => 'lja', 'Lj5g0018648' => 'lja', 'Lj6C789G1' => 'lonja', 'Lj6g0004000' => 'lja', 'Lj7A292G67' => 'lonja', 'Lj7A292T64' => 'lonja', 'Lj9A400T58' => 'lonja', 'Lsat_1_v5_gn_1_126181' => 'lsa', 'Lsat_1_v5_gn_4_123041' => 'lsa', 'Lsat_1_v5_gn_4_133620' => 'lsa', 'Lsat_1_v5_gn_4_53221' => 'lsa', 'Lsat_1_v5_gn_4_71961' => 'lsa', 'Lsat_1_v5_gn_7_105241' => 'lsa', 'Lsat_1_v5_gn_7_21361' => 'lsa', 'Lsat_1_v5_gn_7_28860' => 'lsa', 'Lsat_1_v5_gn_7_31260' => 'lsa', 'Lsat_1_v5_gn_8_52801' => 'lsa', 'Manes.02G191400' => 'mes', 'Manes.03G110100' => 'mes', 'Manes.04G071100' => 'mes', 'Manes.05G100500' => 'mes', 'Manes.05G164700' => 'mes', 'Manes.15G087000' => 'mes', 'Manes.15G121500' => 'mes', 'Manes.16G028300' => 'mes', 'Manes.17G046100' => 'mes', 'Manes.17G069800' => 'mes', 'Manes.18G100500' => 'mes', 'Mapoly0002s0109' => 'mpo', 'Mapoly0024s0007' => 'mpo', 'Mapoly0089s0032' => 'mpo', 'MBI04_g42241_MAGBIO' => 'mbi', 'MBI05_g11988_MAGBIO' => 'mbi', 'MBI05_g35452_MAGBIO' => 'mbi', 'MBI07_g30179_MAGBIO' => 'mbi', 'MBI07_g35859_MAGBIO' => 'mbi', 'MBI07_g35860_MAGBIO' => 'mbi', 'MBI07_g37166_MAGBIO' => 'mbi', 'MBI08_g18172_MAGBIO' => 'mbi', 'MBI09_g08441_MAGBIO' => 'mbi', 'MBI13_g01676_MAGBIO' => 'mbi', 'MBI14_g42955_MAGBIO' => 'mbi', 'MBI16_g13161_MAGBIO' => 'mbi', 'MBI17_g27204_MAGBIO' => 'mbi', 'MBI19_g21595_MAGBIO' => 'mbi', 'MD00G1148400' => 'mdo', 'MD02G1301200' => 'mdo', 'MD03G1227800' => 'mdo', 'MD05G1041100' => 'mdo', 'MD05G1124800' => 'mdo', 'MD05G1284000' => 'mdo', 'MD05G1338800' => 'mdo', 'MD05G1338900' => 'mdo', 'MD07G1022800' => 'mdo', 'MD10G1047500' => 'mdo', 'MD10G1127500' => 'mdo', 'MD10G1262300' => 'mdo', 'MD10G1293800' => 'mdo', 'MD16G1074300' => 'mdo', 'Medtr1g021670' => 'mtr', 'Medtr1g096320' => 'mtr', 'Medtr2g013690' => 'mtr', 'Medtr2g019450' => 'mtr', 'Medtr2g085170' => 'mtr', 'Medtr4g088785' => 'mtr', 'Medtr8g055930' => 'mtr', 'Medtr8g085850' => 'mtr', 'MELO3C002605.2' => 'cme', 'MELO3C003891.2' => 'cme', 'MELO3C004012.2' => 'cme', 'MELO3C007134.2' => 'cme', 'MELO3C008118.2' => 'cme', 'MELO3C016700.2' => 'cme', 'MELO3C024127.2' => 'cme', 'MELO3C033361.2' => 'cme', 'MELO3C033362.2' => 'cme', 'Migut.C00430' => 'egut', 'Migut.C01246' => 'egut', 'Migut.E00101' => 'egut', 'Migut.H01486' => 'egut', 'Migut.H01939' => 'egut', 'Migut.K00360' => 'egut', 'Migut.M00910' => 'egut', 'Migut.M01139' => 'egut', 'Migut.N02677' => 'egut', 'MSTRG.13252' => 'ama', 'MSTRG.14701' => 'ama', 'MSTRG.1521' => 'ama', 'MSTRG.15884' => 'ama', 'MSTRG.16242' => 'ama', 'MSTRG.22285' => 'ama', 'MSTRG.22444' => 'ama', 'MSTRG.2349' => 'ama', 'MSTRG.26308' => 'ama', 'MSTRG.28296' => 'ama', 'MSTRG.9895' => 'ama', 'Nitab4.5_0000110g0060' => 'nta', 'Nitab4.5_0000420g0130' => 'nta', 'Nitab4.5_0000422g0030' => 'nta', 'Nitab4.5_0000560g0180' => 'nta', 'Nitab4.5_0000703g0100' => 'nta', 'Nitab4.5_0000786g0200' => 'nta', 'Nitab4.5_0001336g0020' => 'nta', 'Nitab4.5_0001796g0030' => 'nta', 'Nitab4.5_0003348g0060' => 'nta', 'Nitab4.5_0003698g0040' => 'nta', 'Nitab4.5_0003942g0090' => 'nta', 'Nitab4.5_0004775g0070' => 'nta', 'Nitab4.5_0004864g0030' => 'nta', 'Nitab4.5_0005615g0020' => 'nta', 'Nitab4.5_0009288g0030' => 'nta', 'Nitab4.5_0009341g0010' => 'nta', 'Nitab4.5_0009535g0010' => 'nta', 'Nn1g03995' => 'nnu', 'Nn1g04100' => 'nnu', 'Nn1g06530' => 'nnu', 'Nn3g16404' => 'nnu', 'Nn3g17212' => 'nnu', 'Nn3g20776' => 'nnu', 'Nn3g21923' => 'nnu', 'Nn5g27737' => 'nnu', 'Nn5g29461' => 'nnu', 'Nn7g38355' => 'nnu', 'Nn8g39873' => 'nnu', 'Oeu000548.2' => 'oeu', 'Oeu004672.1' => 'oeu', 'Oeu015605.2' => 'oeu', 'Oeu016092.1' => 'oeu', 'Oeu017879.3' => 'oeu', 'Oeu024910.1' => 'oeu', 'Oeu028965.1' => 'oeu', 'Oeu031269.1' => 'oeu', 'Oeu031270.1' => 'oeu', 'Oeu032535.1' => 'oeu', 'Oeu034151.1' => 'oeu', 'Oeu034152.1' => 'oeu', 'Oeu034588.2' => 'oeu', 'Oeu050846.1' => 'oeu', 'Oeu050849.2' => 'oeu', 'Oeu051063.2' => 'oeu', 'Oeu052368.1' => 'oeu', 'Oeu052370.1' => 'oeu', 'Os01g0210400' => 'osa', 'Os01g0304300' => 'osa', 'Os01g0749100' => 'osa', 'Os02g0745800' => 'osa', 'Os03g0769050' => 'osa', 'Os05g0531500' => 'osa', 'Os06g0724300' => 'osa', 'Os11g0198100' => 'osa', 'Peaxi162Scf00069g01425' => 'pax', 'Peaxi162Scf00280g00811' => 'pax', 'Peaxi162Scf00310g00615' => 'pax', 'Peaxi162Scf00362g00542' => 'pax', 'Peaxi162Scf00461g00310' => 'pax', 'Peaxi162Scf00530g00118' => 'pax', 'Peaxi162Scf00541g00057' => 'pax', 'Peaxi162Scf00661g00017' => 'pax', 'Peaxi162Scf00926g00027' => 'pax', 'Peaxi162Scf01064g00263' => 'pax', 'Peaxi162Scf01211g00135' => 'pax', 'PGR004G2336' => 'pgr', 'PGR042G0327' => 'pgr', 'PGR042G1957' => 'pgr', 'PGR042G2003' => 'pgr', 'PGR042G3929' => 'pgr', 'PGR083G1137' => 'pgr', 'PGR083G1364' => 'pgr', 'PGSC0003DMG400003381' => 'stu', 'PGSC0003DMG400003417' => 'stu', 'PGSC0003DMG400008981' => 'stu', 'PGSC0003DMG400012417' => 'stu', 'PGSC0003DMG400012823' => 'stu', 'PGSC0003DMG400016885' => 'stu', 'PGSC0003DMG400022812' => 'stu', 'PGSC0003DMG400029726' => 'stu', 'PGSC0003DMG401009243' => 'stu', 'PGSC0003DMG401031505' => 'stu', 'PGSC0003DMG402031505' => 'stu', 'Phvul.001G017600' => 'pvu', 'Phvul.002G193500' => 'pvu', 'Phvul.002G228900' => 'pvu', 'Phvul.002G236800' => 'pvu', 'Phvul.003G049500' => 'pvu', 'Phvul.005G072000' => 'pvu', 'Phvul.006G164800' => 'pvu', 'Phvul.006G185100' => 'pvu', 'Phvul.007G090000' => 'pvu', 'Potri.001G399800' => 'ptr', 'Potri.002G149900' => 'ptr', 'Potri.004G044100' => 'ptr', 'Potri.004G177600' => 'ptr', 'Potri.009G138000' => 'ptr', 'Potri.010G094000' => 'ptr', 'Potri.011G053000' => 'ptr', 'Potri.011G119300' => 'ptr', 'Potri.013G113700' => 'ptr', 'Potri.018G107800' => 'ptr', 'Potri.019G084100' => 'ptr', 'Pp3c14_23720' => 'ppa', 'Pp3c16_6340' => 'ppa', 'Pp3c23_13420' => 'ppa', 'Pp3c24_2740' => 'ppa', 'Pp3c25_860' => 'ppa', 'Pp3c8_21750' => 'ppa', 'Prupe.1G273000' => 'ppe', 'Prupe.1G273700' => 'ppe', 'Prupe.1G274100' => 'ppe', 'Prupe.2G023300' => 'ppe', 'Prupe.4G048000' => 'ppe', 'Prupe.4G080400' => 'ppe', 'Prupe.4G181200' => 'ppe', 'Prupe.8G056900' => 'ppe', 'Prupe.8G168700' => 'ppe', 'Psat1g189080' => 'psa', 'Psat1g204760' => 'psa', 'Psat4g175560' => 'psa', 'Psat4g177720' => 'psa', 'Psat5g244240' => 'psa', 'Psat6g010720' => 'psa', 'Psat6g187200' => 'psa', 'Psat7g072040' => 'psa', 'PSO017G3501' => 'pso', 'PSO063G2148' => 'pso', 'PSO063G5608' => 'pso', 'PSO210G6392' => 'pso', 'PSO541G2319' => 'pso', 'PSO541G2836' => 'pso', 'PSO541G4012' => 'pso', 'PSO541G6253' => 'pso', 'PSO675G0580' => 'pso', 'PSO675G0856' => 'pso', 'PSO675G5635' => 'pso', 'PSO675G9157' => 'pso', 'PSO832G1660' => 'pso', 'PSO832G1969' => 'pso', 'QL02p007186' => 'qlo', 'QL02p033904' => 'qlo', 'QL03p064391' => 'qlo', 'QL05p040593' => 'qlo', 'QL05p058242' => 'qlo', 'QL08p021825' => 'qlo', 'QL11p004981' => 'qlo', 'RcHm_v2.0_Chr1g0318301' => 'rch', 'RcHm_v2.0_Chr4g0418501' => 'rch', 'RcHm_v2.0_Chr4g0439971' => 'rch', 'RcHm_v2.0_Chr5g0008541' => 'rch', 'RcHm_v2.0_Chr5g0014101' => 'rch', 'RcHm_v2.0_Chr5g0014131' => 'rch', 'RcHm_v2.0_Chr5g0033621' => 'rch', 'RcHm_v2.0_Chr6g0272041' => 'rch', 'RcHm_v2.0_Chr6g0278831' => 'rch', 'Rhsim02G0130400' => 'rsi', 'Rhsim02G0171100' => 'rsi', 'Rhsim05G0053000' => 'rsi', 'Rhsim05G0053100' => 'rsi', 'Rhsim06G0096500' => 'rsi', 'Rhsim06G0096600' => 'rsi', 'Rhsim06G0199100' => 'rsi', 'Rhsim12G0062300' => 'rsi', 'Rhsim12G0062800' => 'rsi', 'Sabra02G0118600' => 'sbr', 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'Solyc03g079860.2' => 'sly', 'Solyc04g079770.3' => 'sly', 'Solyc05g007430.4' => 'sly', 'Solyc07g063150.3' => 'sly', 'Solyc08g016620.3' => 'sly', 'Solyc09g057590.3' => 'sly', 'Solyc09g057600.1' => 'sly', 'Solyc10g009050.3' => 'sly', 'Solyc11g017420.2' => 'sly', 'Sopen01g053810' => 'spe', 'Sopen02g023040' => 'spe', 'Sopen03g002440' => 'spe', 'Sopen04g033350' => 'spe', 'Sopen05g003310' => 'spe', 'Sopen07g004050' => 'spe', 'Sopen07g031340' => 'spe', 'Sopen08g006990' => 'spe', 'Sopen10g004830' => 'spe', 'Sopen11g009370' => 'spe', 'Sp1g24450' => 'spa', 'Sp1g29670' => 'spa', 'Sp1g39600' => 'spa', 'Sp2g11080' => 'spa', 'Sp2g13970' => 'spa', 'Sp4g16130' => 'spa', 'Sp6g13080' => 'spa', 'Sp7g37270' => 'spa', 'TAR371G0065' => 'tar', 'TAR376G0340' => 'tar', 'TAR376G0435' => 'tar', 'TAR381G0002' => 'tar', 'TAR381G1236' => 'tar', 'TAR624G0055' => 'tar', 'TAR624G0324' => 'tar', 'TAR624G0696' => 'tar', 'TAR624G0906' => 'tar', 'TAR625G0107' => 'tar', 'TAR626G0015' => 'tar', 'TAR626G1356' => 'tar', 'TAR627G0888' => 'tar', 'TAR628G0399' => 'tar', 'TAR628G1327' => 'tar', 'TAR629G2831' => 'tar', 'TAR629G2874' => 'tar', 'TAR633G1432' => 'tar', 'TAR633G2771' => 'tar', 'THA.LOC104803394' => 'tha', 'THA.LOC104805153' => 'tha', 'THA.LOC104806784' => 'tha', 'THA.LOC104810473' => 'tha', 'THA.LOC104813100' => 'tha', 'THA.LOC104814215' => 'tha', 'THA.LOC104815554' => 'tha', 'THA.LOC104820544' => 'tha', 'THA.LOC104824754' => 'tha', 'THA.LOC104827717' => 'tha', 'Thecc.02G031400' => 'tca', 'Thecc.02G055900' => 'tca', 'Thecc.02G350800' => 'tca', 'Thecc.06G150900' => 'tca', 'Thecc.06G186600' => 'tca', 'Thecc.07G089600' => 'tca', 'Thecc.08G020400' => 'tca', 'Thecc.08G182100' => 'tca', 'Thhalv10000873m.g' => 'esa', 'Thhalv10004185m.g' => 'esa', 'Thhalv10006981m.g' => 'esa', 'Thhalv10007204m.g' => 'esa', 'Thhalv10011374m.g' => 'esa', 'Thhalv10013482m.g' => 'esa', 'Thhalv10017801m.g' => 'esa', 'Thhalv10024983m.g' => 'esa', 'TPR.G12072' => 'tpr', 'TPR.G15769' => 'tpr', 'TPR.G16504' => 'tpr', 'TPR.G16506' => 'tpr', 'TPR.G24345' => 'tpr', 'TPR.G26666' => 'tpr', 'TPR.G27320' => 'tpr', 'TPR.G31819' => 'tpr', 'TPR.G38879' => 'tpr', 'TPR.G39015' => 'tpr', 'TPR.G8819' => 'tpr', 'TWI09G0924' => 'twi', 'TWI12G0811' => 'twi', 'TWI12G1294' => 'twi', 'TWI31G0150' => 'twi', 'TWI36G1262' => 'twi', 'TWI38G1287' => 'twi', 'TWI38G1633' => 'twi', 'TWI38G1982' => 'twi', 'TWI39G0116' => 'twi', 'TWI60G1011' => 'twi', 'TWI63G0171' => 'twi', 'TWI73G0839' => 'twi', 'TWI79G1511' => 'twi', 'unitig_0.g915' => 'ugi', 'unitig_0.g916' => 'ugi', 'unitig_21.g20219' => 'ugi', 'unitig_21.g20416' => 'ugi', 'unitig_578.g16132' => 'ugi', 'unitig_578.g16718' => 'ugi', 'unitig_62.g23481' => 'ugi', 'unitig_744.g24535' => 'ugi', 'unitig_749.g13525' => 'ugi', 'vmacro01248' => 'vma', 'vmacro02290' => 'vma', 'vmacro10946' => 'vma', 'vmacro11865' => 'vma', 'vmacro12493' => 'vma', 'vmacro17322' => 'vma', 'vmacro21599' => 'vma', 'vmacro23041' => 'vma', 'VMungo0251G0004' => 'vmu', 'VMungo0251G2639' => 'vmu', 'VMungo0251G2967' => 'vmu', 'VMungo0540G0864' => 'vmu', 'VMungo0540G1569' => 'vmu', 'VMungo0647G0317' => 'vmu', 'VMungo0720G1373' => 'vmu', 'VMungo0720G1508' => 'vmu', 'VMungo1080G0485' => 'vmu', 'VMungo1215G3177' => 'vmu', 'Zm00001eb112600' => 'zma', 'Zm00001eb120220' => 'zma', 'Zm00001eb153240' => 'zma', 'Zm00001eb168880' => 'zma', 'Zm00001eb213920' => 'zma', 'Zm00001eb228280' => 'zma', 'Zm00001eb254580' => 'zma', 'Zm00001eb272180' => 'zma', 'Zm00001eb293190' => 'zma', 'Zm00001eb322930' => 'zma', 'Zm00001eb353360' => 'zma', 'Zm00001eb353390' => 'zma', 'Zm00001eb353430' => 'zma', 'Zm00001eb353440' => 'zma', 'Zm00001eb353780' => 'zma' ), 'gf_id' => 'HOM05D000499', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000499' ), 'data_identifier' => 'HOM05D000499', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000499', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1066', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p29780' => 'bna', 'A02p33180' => 'bna', 'A03p16470' => 'bna', 'A03p66010' => 'bna', 'A04p25970' => 'bna', 'A06p01270' => 'bna', 'A06p46080' => 'bna', 'A07p11400' => 'bna', 'A08p01840' => 'bna', 'A08p08230' => 'bna', 'A08p25740' => 'bna', 'A09p32070' => 'bna', 'A09p37830' => 'bna', 'A09p42840' => 'bna', 'A09p42850' => 'bna', 'Aa31LG10G2060' => 'aar', 'Aa31LG2G7410' => 'aar', 'Aa31LG6G10200' => 'aar', 'Aa31LG6G16680' => 'aar', 'Aa31LG6G8470' => 'aar', 'Aa31LG9G12730' => 'aar', 'Aa31LG9G13680' => 'aar', 'Aa31LG9G14920' => 'aar', 'Aa31LG9G6650' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4977' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5467' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3254' => 'aag', 'Actinidia02578' => 'ach', 'Actinidia07693' => 'ach', 'Actinidia08413' => 'ach', 'Actinidia08414' => 'ach', 'Actinidia15289' => 'ach', 'Actinidia19871' => 'ach', 'Actinidia21475' => 'ach', 'Actinidia22576' => 'ach', 'Actinidia28327' => 'ach', 'Actinidia32491' => 'ach', 'Actinidia39463' => 'ach', 'Actinidia39571' => 'ach', 'Ah.01g013750' => 'amhyb', 'Ah.01g023210' => 'amhyb', 'Ah.04g164850' => 'amhyb', 'Ah.05g178060' => 'amhyb', 'Ah.07g204270' => 'amhyb', 'Ah.07g208480' => 'amhyb', 'Ah.09g237410' => 'amhyb', 'Ah.14g089460' => 'amhyb', 'AL1G41790' => 'aly', 'AL1G49050' => 'aly', 'AL1G53810' => 'aly', 'AL1G61400' => 'aly', 'AL4G18580' => 'aly', 'AL5G12510' => 'aly', 'AL5G12540' => 'aly', 'AL6G43230' => 'aly', 'AL7G10370' => 'aly', 'AL7G19250' => 'aly', 'AL8G12240' => 'aly', 'AL8G18540' => 'aly', 'Aqoxy1G02409' => 'aox', 'Aqoxy2G03993' => 'aox', 'Aqoxy3G03357' => 'aox', 'Aqoxy4G00785' => 'aox', 'Aqoxy5G02598' => 'aox', 'Aqoxy6G00132' => 'aox', 'Aqoxy7G01776' => 'aox', 'Aqoxy7G02316' => 'aox', 'Aqoxy7G03973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.12AFKW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B8730' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27IQR1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3F75VG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3RE0GA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41TCQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.527VTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FIR39' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5W8UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DA38EV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ63HS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H1I32C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HC27T5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4M8AP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7N3CZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9UVDZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LS1NQA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT1D4B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SKC4TM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCFV76' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF9Q1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQWD9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1ZM88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WE07RT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YCK7VH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJE6Q6' => 'arhy', 'AT1G28240' => 'ath', 'AT1G34550' => 'ath', 'AT1G53040' => 'ath', 'AT2G02910' => 'ath', 'AT4G09630' => 'ath', 'AT4G38500' => 'ath', 'AT5G42660' => 'ath', 'AT5G46220' => 'ath', 'ATR0152G026' => 'atr', 'ATR0564G343' => 'atr', 'ATR0706G151' => 'atr', 'ATR0733G207' => 'atr', 'ATR0751G234' => 'atr', 'ATR0807G048' => 'atr', 'ATR1091G084' => 'atr', 'Atru.chr10.1229' => 'acertr', 'Atru.chr10.1230' => 'acertr', 'Atru.chr10.1874' => 'acertr', 'Atru.chr11.1808' => 'acertr', 'Atru.chr13.1795' => 'acertr', 'Atru.chr13.570' => 'acertr', 'Atru.chr2.2608' => 'acertr', 'Atru.chr2.2609' => 'acertr', 'Atru.chr5.3428' => 'acertr', 'Atru.chr8.1171' => 'acertr', 'AUR62004651' => 'cqu', 'AUR62008675' => 'cqu', 'AUR62010014' => 'cqu', 'AUR62013004' => 'cqu', 'AUR62014825' => 'cqu', 'AUR62015015' => 'cqu', 'AUR62015151' => 'cqu', 'AUR62017020' => 'cqu', 'AUR62019422' => 'cqu', 'AUR62023570' => 'cqu', 'AUR62025571' => 'cqu', 'AUR62029098' => 'cqu', 'AUR62033863' => 'cqu', 'AUR62034296' => 'cqu', 'AUR62040075' => 'cqu', 'BcaB02g07334' => 'bca', 'BcaB02g10575' => 'bca', 'BcaB03g12119' => 'bca', 'BcaB03g12120' => 'bca', 'BcaB03g13945' => 'bca', 'BcaB04g17123' => 'bca', 'BcaB04g17867' => 'bca', 'BcaB04g19839' => 'bca', 'BcaB07g30317' => 'bca', 'BcaB07g32432' => 'bca', 'BcaB07g33362' => 'bca', 'BcaB08g36611' => 'bca', 'BcaC01g00028' => 'bca', 'BcaC01g01356' => 'bca', 'BcaC01g02034' => 'bca', 'BcaC01g06051' => 'bca', 'BcaC03g16839' => 'bca', 'BcaC03g17176' => 'bca', 'BcaC05g26829' => 'bca', 'BcaC06g31490' => 'bca', 'BcaC06g35344' => 'bca', 'BcaC06g36570' => 'bca', 'BcaC07g37537' => 'bca', 'BcaC08g43491' => 'bca', 'BcaC08g43773' => 'bca', 'BcaNung00234' => 'bca', 'BcaNung01982' => 'bca', 'BcaNung03707' => 'bca', 'BcaNung06454' => 'bca', 'BolC2t10762H' => 'bol', 'BolC2t11191H' => 'bol', 'BolC3t14322H' => 'bol', 'BolC3t19747H' => 'bol', 'BolC3t21425H' => 'bol', 'BolC4t27800H' => 'bol', 'BolC5t31423H' => 'bol', 'BolC6t35951H' => 'bol', 'BolC6t36282H' => 'bol', 'BolC7t40678H' => 'bol', 'BolC7t40679H' => 'bol', 'BolC7t42222H' => 'bol', 'BolC7t43492H' => 'bol', 'BolC7t46785H' => 'bol', 'BolC8t47853H' => 'bol', 'BolC9t56805H' => 'bol', 'BraA02t08000Z' => 'bra', 'BraA02t08341Z' => 'bra', 'BraA03t10936Z' => 'bra', 'BraA03t15657Z' => 'bra', 'BraA04t18100Z' => 'bra', 'BraA05t20523Z' => 'bra', 'BraA06t23353Z' => 'bra', 'BraA06t27473Z' => 'bra', 'BraA06t27769Z' => 'bra', 'BraA07t28928Z' => 'bra', 'BraA08t32236Z' => 'bra', 'BraA08t32841Z' => 'bra', 'BraA08t34524Z' => 'bra', 'BraA09t38742Z' => 'bra', 'BraA09t39295Z' => 'bra', 'C02p47180' => 'bna', 'C02p50990' => 'bna', 'C03p19360' => 'bna', 'C03p74950' => 'bna', 'C03p91000' => 'bna', 'C04p63260' => 'bna', 'C05p27050' => 'bna', 'C06p08750' => 'bna', 'C06p11490' => 'bna', 'C07p02820' => 'bna', 'C07p17180' => 'bna', 'C07p29440' => 'bna', 'C07p63730' => 'bna', 'C09p39260' => 'bna', 'CAN.G1164.34' => 'can', 'CAN.G1164.39' => 'can', 'CAN.G1530.3' => 'can', 'CAN.G162.61' => 'can', 'CAN.G176.6' => 'can', 'CAN.G289.49' => 'can', 'CAN.G370.21' => 'can', 'CAN.G370.22' => 'can', 'CAN.G371.117' => 'can', 'CAN.G58.37' => 'can', 'CAN.G588.98' => 'can', 'CANSAT21G2266' => 'cansat', 'CANSAT25G2799' => 'cansat', 'CANSAT35G0862' => 'cansat', 'CANSAT35G1704' => 'cansat', 'CANSAT35G1760' => 'cansat', 'CANSAT56G3971' => 'cansat', 'CANSAT56G4116' => 'cansat', 'CANSAT80G1259' => 'cansat', 'CARHR027730' => 'chi', 'CARHR033880' => 'chi', 'CARHR043270' => 'chi', 'CARHR145330' => 'chi', 'CARHR145340' => 'chi', 'CARHR175570' => 'chi', 'CARHR181570' => 'chi', 'CARHR258470' => 'chi', 'CARHR260490' => 'chi', 'CARHR294220' => 'chi', 'Carub.0001s2668' => 'cru', 'Carub.0001s3257' => 'cru', 'Carub.0001s4220' => 'cru', 'Carub.0005s0179' => 'cru', 'Carub.0006s2807' => 'cru', 'Carub.0007s0039' => 'cru', 'Carub.0008s0169' => 'cru', 'Carub.0008s0636' => 'cru', 'Ca_00338_v3' => 'car', 'Ca_00542_v3' => 'car', 'Ca_01844_v3' => 'car', 'Ca_10611_v3' => 'car', 'Ca_13326_v3' => 'car', 'Ca_17944_v3' => 'car', 'Ca_18546_v3' => 'car', 'Ca_24219_v3' => 'car', 'Ca_29972_v3' => 'car', 'CBR_g3681' => 'cbr', 'CBR_g40021' => 'cbr', 'Cc01_g08140' => 'ccan', 'Cc02_g13410' => 'ccan', 'Cc02_g37480' => 'ccan', 'Cc05_g12030' => 'ccan', 'Cc09_g03370' => 'ccan', 'Cc09_g10300' => 'ccan', 'Cc10_g03530' => 'ccan', 'Cc10_g11380' => 'ccan', 'CDE01G0176' => 'cde', 'CDE02G0675' => 'cde', 'CDE02G0942' => 'cde', 'CDE02G1153' => 'cde', 'CDE02G4177' => 'cde', 'CDE04G2117' => 'cde', 'CDE04G2736' => 'cde', 'CDE08G1161' => 'cde', 'CDE09G1238' => 'cde', 'Cfa000467' => 'cfa', 'Cfa000947' => 'cfa', 'Cfa004969' => 'cfa', 'Cfa005284' => 'cfa', 'Cfa008993' => 'cfa', 'Cfa018187' => 'cfa', 'Cfa018454' => 'cfa', 'Cfa020585' => 'cfa', 'Ciclev10000424m.g' => 'ccl', 'Ciclev10003605m.g' => 'ccl', 'Ciclev10007828m.g' => 'ccl', 'Ciclev10014620m.g' => 'ccl', 'Ciclev10015169m.g' => 'ccl', 'Ciclev10018291m.g' => 'ccl', 'Ciclev10028256m.g' => 'ccl', 'Ciclev10033822m.g' => 'ccl', 'CiPaw.05G060300' => 'cil', 'CiPaw.05G085000' => 'cil', 'CiPaw.06G083700' => 'cil', 'CiPaw.06G120300' => 'cil', 'CiPaw.09G060500' => 'cil', 'CiPaw.09G123800' => 'cil', 'CiPaw.11G169700' => 'cil', 'CiPaw.12G118300' => 'cil', 'CiPaw.15G071000' => 'cil', 'CiPaw.15G081900' => 'cil', 'ClCG01G024610' => 'cla', 'ClCG03G006070' => 'cla', 'ClCG05G019250' => 'cla', 'ClCG09G009500' => 'cla', 'ClCG11G008200' => 'cla', 'ClCG11G018080' => 'cla', 'COL.COLO4_17373' => 'col', 'COL.COLO4_22994' => 'col', 'COL.COLO4_26389' => 'col', 'COL.COLO4_27170' => 'col', 'COL.COLO4_31074' => 'col', 'COL.COLO4_31465' => 'col', 'COL.COLO4_36438' => 'col', 'COL.COLO4_36439' => 'col', 'Cpa.g.c38781' => 'cpa', 'Cpa.g.sc128.12' => 'cpa', 'Cpa.g.sc166.7' => 'cpa', 'Cpa.g.sc166.8' => 'cpa', 'Cpa.g.sc20.111' => 'cpa', 'Cpa.g.sc27.31' => 'cpa', 'Cpa.g.sc64.36' => 'cpa', 'Cpa.g.sc64.37' => 'cpa', 'Cpa.g.sc66.49' => 'cpa', 'Cpa.g.sc80.64' => 'cpa', 'CsaV3_1G012320' => 'csa', 'CsaV3_2G008480' => 'csa', 'CsaV3_2G033450' => 'csa', 'CsaV3_3G044830' => 'csa', 'CsaV3_4G033710' => 'csa', 'CsaV3_6G051730' => 'csa', 'CsaV3_7G025350' => 'csa', 'CSS0001067' => 'camsi', 'CSS0005996' => 'camsi', 'CSS0006590' => 'camsi', 'CSS0009673' => 'camsi', 'CSS0010201' => 'camsi', 'CSS0010549' => 'camsi', 'CSS0011364' => 'camsi', 'CSS0014473' => 'camsi', 'CSS0014961' => 'camsi', 'CSS0020191' => 'camsi', 'CSS0021165' => 'camsi', 'CSS0022306' => 'camsi', 'CSS0030591' => 'camsi', 'CSS0030696' => 'camsi', 'CSS0032653' => 'camsi', 'CSS0037487' => 'camsi', 'CSS0041102' => 'camsi', 'CSS0041261' => 'camsi', 'CSS0046246' => 'camsi', 'CSS0049256' => 'camsi', 'DCAR_004075' => 'dca', 'DCAR_011538' => 'dca', 'DCAR_019553' => 'dca', 'DCAR_020952' => 'dca', 'DCAR_021739' => 'dca', 'DCAR_027407' => 'dca', 'DCAR_027913' => 'dca', 'DCAR_028066' => 'dca', 'Dinv05899' => 'din', 'Dinv07563' => 'din', 'Dinv08010' => 'din', 'Dinv14125' => 'din', 'Dinv20172' => 'din', 'Dinv30743' => 'din', 'Dinv31229' => 'din', 'Dinv34162' => 'din', 'Dinv36028' => 'din', 'Dinv39368' => 'din', 'Dinv40565' => 'din', 'Dinv41706' => 'din', 'Duzib052G0089' => 'dzi', 'Duzib116G0641' => 'dzi', 'Duzib132G0069' => 'dzi', 'Duzib132G1219' => 'dzi', 'Duzib147G0278' => 'dzi', 'Duzib160G0480' => 'dzi', 'Duzib170G0661' => 'dzi', 'Duzib177G0591' => 'dzi', 'Duzib187G1353' => 'dzi', 'Duzib192G0858' => 'dzi', 'Duzib192G0883' => 'dzi', 'Duzib213G0506' => 'dzi', 'Duzib235G0289' => 'dzi', 'Duzib251G0422' => 'dzi', 'ECA232G3898' => 'eca', 'ECA233G5950' => 'eca', 'ECA234G1699' => 'eca', 'ECA234G2421' => 'eca', 'ECA236G0426' => 'eca', 'ECA236G4331' => 'eca', 'ECA248G2573' => 'eca', 'EL10Ac1g00077' => 'bvu', 'EL10Ac1g01746' => 'bvu', 'EL10Ac2g03464' => 'bvu', 'EL10Ac4g08176' => 'bvu', 'EL10Ac7g17521' => 'bvu', 'EL10Ac8g20386' => 'bvu', 'EL10Ac9g21343' => 'bvu', 'EL10Ac9g22688' => 'bvu', 'Eucgr.B03434' => 'egr', 'Eucgr.D00618' => 'egr', 'Eucgr.E02395' => 'egr', 'Eucgr.F01129' => 'egr', 'Eucgr.F02622' => 'egr', 'Eucgr.F04207' => 'egr', 'FAN01G0570' => 'fan', 'FAN03G3351' => 'fan', 'FAN06G3702' => 'fan', 'FAN07G2149' => 'fan', 'FAN10G3758' => 'fan', 'FAN11G1170' => 'fan', 'FAN11G2050' => 'fan', 'FAN11G2724' => 'fan', 'FAN12G1700' => 'fan', 'FAN12G2028' => 'fan', 'FAN15G1160' => 'fan', 'FAN15G3063' => 'fan', 'FAN16G2540' => 'fan', 'FAN16G3077' => 'fan', 'FAN16G3624' => 'fan', 'FAN17G0221' => 'fan', 'FAN20G2492' => 'fan', 'FAN20G2905' => 'fan', 'FAN21G0548' => 'fan', 'FAN21G1300' => 'fan', 'FAN22G0077' => 'fan', 'FAN22G1315' => 'fan', 'FAN24G1280' => 'fan', 'FAN24G1445' => 'fan', 'FAN24G3527' => 'fan', 'FAN25G0464' => 'fan', 'FAN25G2885' => 'fan', 'FAN25G3270' => 'fan', 'FAN27G1101' => 'fan', 'FAN27G2846' => 'fan', 'FAN27G3524' => 'fan', 'FvH4_2g11770' => 'fve', 'FvH4_2g15630' => 'fve', 'FvH4_3g05570' => 'fve', 'FvH4_3g09110' => 'fve', 'FvH4_3g19940' => 'fve', 'FvH4_4g04821' => 'fve', 'FvH4_4g31480' => 'fve', 'FvH4_7g01740' => 'fve', 'Glyma.05G130400' => 'gma', 'Glyma.05G156400' => 'gma', 'Glyma.07G197000' => 'gma', 'Glyma.08G085151' => 'gma', 'Glyma.08G114500' => 'gma', 'Glyma.08G300400' => 'gma', 'Glyma.10G215800' => 'gma', 'Glyma.12G224400' => 'gma', 'Glyma.13G179300' => 'gma', 'Glyma.13G218151' => 'gma', 'Glyma.13G238800' => 'gma', 'Glyma.13G276900' => 'gma', 'Glyma.14G078200' => 'gma', 'Glyma.15G074500' => 'gma', 'Glyma.15G094100' => 'gma', 'Glyma.17G247200' => 'gma', 'Glyma.18G120100' => 'gma', 'Glyma.20G176000' => 'gma', 'Gohir.A01G063600' => 'ghi', 'Gohir.A01G170301' => 'ghi', 'Gohir.A02G060500' => 'ghi', 'Gohir.A05G133850' => 'ghi', 'Gohir.A05G161400' => 'ghi', 'Gohir.A06G012900' => 'ghi', 'Gohir.A06G035901' => 'ghi', 'Gohir.A06G127100' => 'ghi', 'Gohir.A06G210500' => 'ghi', 'Gohir.A08G008650' => 'ghi', 'Gohir.A09G072700' => 'ghi', 'Gohir.A09G088301' => 'ghi', 'Gohir.A10G040600' => 'ghi', 'Gohir.A12G036300' => 'ghi', 'Gohir.A12G143350' => 'ghi', 'Gohir.A12G165500' => 'ghi', 'Gohir.A13G145700' => 'ghi', 'Gohir.D01G050000' => 'ghi', 'Gohir.D01G051366' => 'ghi', 'Gohir.D01G161350' => 'ghi', 'Gohir.D02G065900' => 'ghi', 'Gohir.D05G164200' => 'ghi', 'Gohir.D05G355500' => 'ghi', 'Gohir.D06G010400' => 'ghi', 'Gohir.D06G111250' => 'ghi', 'Gohir.D06G132000' => 'ghi', 'Gohir.D06G210500' => 'ghi', 'Gohir.D07G165675' => 'ghi', 'Gohir.D08G062240' => 'ghi', 'Gohir.D08G086101' => 'ghi', 'Gohir.D08G138060' => 'ghi', 'Gohir.D09G072300' => 'ghi', 'Gohir.D10G041400' => 'ghi', 'Gohir.D11G191020' => 'ghi', 'Gohir.D11G212066' => 'ghi', 'Gohir.D12G036300' => 'ghi', 'Gohir.D12G168600' => 'ghi', 'Gohir.D13G150600' => 'ghi', 'Gorai.001G057300' => 'gra', 'Gorai.002G069900' => 'gra', 'Gorai.002G200000' => 'gra', 'Gorai.003G067600' => 'gra', 'Gorai.005G074800' => 'gra', 'Gorai.006G087300' => 'gra', 'Gorai.008G037500' => 'gra', 'Gorai.008G181400' => 'gra', 'Gorai.009G169400' => 'gra', 'Gorai.009G387900' => 'gra', 'Gorai.010G013300' => 'gra', 'Gorai.010G153800' => 'gra', 'Gorai.010G255800' => 'gra', 'Gorai.011G043700' => 'gra', 'Gorai.011G198900' => 'gra', 'Gorai.013G168400' => 'gra', 'GSVIVG01005212001' => 'vvi', 'GSVIVG01006163001' => 'vvi', 'GSVIVG01009625001' => 'vvi', 'GSVIVG01014338001' => 'vvi', 'GSVIVG01020005001' => 'vvi', 'GSVIVG01021450001' => 'vvi', 'GSVIVG01023975001' => 'vvi', 'GSVIVG01034490001' => 'vvi', 'HanXRQChr04g0112071' => 'han', 'HanXRQChr05g0131151' => 'han', 'HanXRQChr09g0262371' => 'han', 'HanXRQChr09g0268401' => 'han', 'HanXRQChr10g0279241' => 'han', 'HanXRQChr10g0297961' => 'han', 'HanXRQChr11g0326231' => 'han', 'HanXRQChr11g0328471' => 'han', 'HanXRQChr16g0507941' => 'han', 'HanXRQChr17g0560211' => 'han', 'Haze_02108' => 'cav', 'Haze_02428' => 'cav', 'Haze_05593' => 'cav', 'Haze_06448' => 'cav', 'Haze_09427' => 'cav', 'Haze_12022' => 'cav', 'Haze_17612' => 'cav', 'Haze_17928' => 'cav', 'Hma1.2p1_0032F.1_g019250' => 'hma', 'Hma1.2p1_0163F.1_g072690' => 'hma', 'Hma1.2p1_0265F.1_g106710' => 'hma', 'Hma1.2p1_0286F.1_g113970' => 'hma', 'Hma1.2p1_0363F.1_g136640' => 'hma', 'Hma1.2p1_0584F.1_g183470' => 'hma', 'Hma1.2p1_0885F.1_g232570' => 'hma', 'HPP92_006022' => 'vpl', 'HPP92_007320' => 'vpl', 'HPP92_011521' => 'vpl', 'HPP92_019387' => 'vpl', 'HPP92_024038' => 'vpl', 'Hund05891' => 'sun', 'Hund06450' => 'sun', 'Hund12053' => 'sun', 'Hund16800' => 'sun', 'Hund21222' => 'sun', 'Hund22896' => 'sun', 'Hund23746' => 'sun', 'Hund27083' => 'sun', 'Lalb_Chr02g0141831' => 'lal', 'Lalb_Chr02g0141841' => 'lal', 'Lalb_Chr05g0220411' => 'lal', 'Lalb_Chr06g0162081' => 'lal', 'Lalb_Chr09g0327651' => 'lal', 'Lalb_Chr13g0295051' => 'lal', 'Lalb_Chr15g0086801' => 'lal', 'Lalb_Chr16g0383781' => 'lal', 'Lalb_Chr16g0383791' => 'lal', 'Lalb_Chr18g0055441' => 'lal', 'Lalb_Chr18g0059611' => 'lal', 'Lalb_Chr20g0109661' => 'lal', 'Lalb_Chr20g0109831' => 'lal', 'Lalb_Chr20g0121871' => 'lal', 'Lalb_Chr22g0355361' => 'lal', 'Lalb_Chr25g0286371' => 'lal', 'Lj1A1187G43' => 'lonja', 'Lj1A1205T50' => 'lonja', 'Lj1A800G33' => 'lonja', 'Lj1C1187T7' => 'lonja', 'Lj1C843T11' => 'lonja', 'Lj1g0010940' => 'lja', 'Lj2A288T69' => 'lonja', 'Lj3g0024276' => 'lja', 'Lj4A47T76' => 'lonja', 'Lj4g0005805' => 'lja', 'Lj4g0006097' => 'lja', 'Lj4g0008528' => 'lja', 'Lj4g0024907' => 'lja', 'Lj5g0012472' => 'lja', 'Lj5g0018648' => 'lja', 'Lj6C789G1' => 'lonja', 'Lj6g0004000' => 'lja', 'Lj7A292G67' => 'lonja', 'Lj7A292T64' => 'lonja', 'Lj9A400T58' => 'lonja', 'Lsat_1_v5_gn_1_126181' => 'lsa', 'Lsat_1_v5_gn_4_123041' => 'lsa', 'Lsat_1_v5_gn_4_133620' => 'lsa', 'Lsat_1_v5_gn_4_53221' => 'lsa', 'Lsat_1_v5_gn_4_71961' => 'lsa', 'Lsat_1_v5_gn_7_105241' => 'lsa', 'Lsat_1_v5_gn_7_21361' => 'lsa', 'Lsat_1_v5_gn_7_28860' => 'lsa', 'Lsat_1_v5_gn_7_31260' => 'lsa', 'Lsat_1_v5_gn_8_52801' => 'lsa', 'Manes.02G191400' => 'mes', 'Manes.03G110100' => 'mes', 'Manes.04G071100' => 'mes', 'Manes.05G100500' => 'mes', 'Manes.05G164700' => 'mes', 'Manes.15G087000' => 'mes', 'Manes.15G121500' => 'mes', 'Manes.16G028300' => 'mes', 'Manes.17G046100' => 'mes', 'Manes.17G069800' => 'mes', 'Manes.18G100500' => 'mes', 'Mapoly0002s0109' => 'mpo', 'Mapoly0024s0007' => 'mpo', 'Mapoly0089s0032' => 'mpo', 'MBI04_g42241_MAGBIO' => 'mbi', 'MBI05_g11988_MAGBIO' => 'mbi', 'MBI05_g35452_MAGBIO' => 'mbi', 'MBI07_g30179_MAGBIO' => 'mbi', 'MBI07_g35859_MAGBIO' => 'mbi', 'MBI07_g35860_MAGBIO' => 'mbi', 'MBI07_g37166_MAGBIO' => 'mbi', 'MBI08_g18172_MAGBIO' => 'mbi', 'MBI09_g08441_MAGBIO' => 'mbi', 'MBI13_g01676_MAGBIO' => 'mbi', 'MBI14_g42955_MAGBIO' => 'mbi', 'MBI16_g13161_MAGBIO' => 'mbi', 'MBI17_g27204_MAGBIO' => 'mbi', 'MBI19_g21595_MAGBIO' => 'mbi', 'MD00G1148400' => 'mdo', 'MD02G1301200' => 'mdo', 'MD03G1227800' => 'mdo', 'MD05G1041100' => 'mdo', 'MD05G1124800' => 'mdo', 'MD05G1284000' => 'mdo', 'MD05G1338800' => 'mdo', 'MD05G1338900' => 'mdo', 'MD07G1022800' => 'mdo', 'MD10G1047500' => 'mdo', 'MD10G1127500' => 'mdo', 'MD10G1262300' => 'mdo', 'MD10G1293800' => 'mdo', 'MD16G1074300' => 'mdo', 'Medtr1g021670' => 'mtr', 'Medtr1g096320' => 'mtr', 'Medtr2g013690' => 'mtr', 'Medtr2g019450' => 'mtr', 'Medtr2g085170' => 'mtr', 'Medtr4g088785' => 'mtr', 'Medtr8g055930' => 'mtr', 'Medtr8g085850' => 'mtr', 'MELO3C002605.2' => 'cme', 'MELO3C003891.2' => 'cme', 'MELO3C004012.2' => 'cme', 'MELO3C007134.2' => 'cme', 'MELO3C008118.2' => 'cme', 'MELO3C016700.2' => 'cme', 'MELO3C024127.2' => 'cme', 'MELO3C033361.2' => 'cme', 'MELO3C033362.2' => 'cme', 'Migut.C00430' => 'egut', 'Migut.C01246' => 'egut', 'Migut.E00101' => 'egut', 'Migut.H01486' => 'egut', 'Migut.H01939' => 'egut', 'Migut.K00360' => 'egut', 'Migut.M00910' => 'egut', 'Migut.M01139' => 'egut', 'Migut.N02677' => 'egut', 'MSTRG.13252' => 'ama', 'MSTRG.14701' => 'ama', 'MSTRG.1521' => 'ama', 'MSTRG.15884' => 'ama', 'MSTRG.16242' => 'ama', 'MSTRG.22285' => 'ama', 'MSTRG.22444' => 'ama', 'MSTRG.2349' => 'ama', 'MSTRG.26308' => 'ama', 'MSTRG.28296' => 'ama', 'MSTRG.9895' => 'ama', 'Nitab4.5_0000110g0060' => 'nta', 'Nitab4.5_0000420g0130' => 'nta', 'Nitab4.5_0000422g0030' => 'nta', 'Nitab4.5_0000560g0180' => 'nta', 'Nitab4.5_0000703g0100' => 'nta', 'Nitab4.5_0000786g0200' => 'nta', 'Nitab4.5_0001336g0020' => 'nta', 'Nitab4.5_0001796g0030' => 'nta', 'Nitab4.5_0003348g0060' => 'nta', 'Nitab4.5_0003698g0040' => 'nta', 'Nitab4.5_0003942g0090' => 'nta', 'Nitab4.5_0004775g0070' => 'nta', 'Nitab4.5_0004864g0030' => 'nta', 'Nitab4.5_0005615g0020' => 'nta', 'Nitab4.5_0009288g0030' => 'nta', 'Nitab4.5_0009341g0010' => 'nta', 'Nitab4.5_0009535g0010' => 'nta', 'Nn1g03995' => 'nnu', 'Nn1g04100' => 'nnu', 'Nn1g06530' => 'nnu', 'Nn3g16404' => 'nnu', 'Nn3g17212' => 'nnu', 'Nn3g20776' => 'nnu', 'Nn3g21923' => 'nnu', 'Nn5g27737' => 'nnu', 'Nn5g29461' => 'nnu', 'Nn7g38355' => 'nnu', 'Nn8g39873' => 'nnu', 'Oeu000548.2' => 'oeu', 'Oeu004672.1' => 'oeu', 'Oeu015605.2' => 'oeu', 'Oeu016092.1' => 'oeu', 'Oeu017879.3' => 'oeu', 'Oeu024910.1' => 'oeu', 'Oeu028965.1' => 'oeu', 'Oeu031269.1' => 'oeu', 'Oeu031270.1' => 'oeu', 'Oeu032535.1' => 'oeu', 'Oeu034151.1' => 'oeu', 'Oeu034152.1' => 'oeu', 'Oeu034588.2' => 'oeu', 'Oeu050846.1' => 'oeu', 'Oeu050849.2' => 'oeu', 'Oeu051063.2' => 'oeu', 'Oeu052368.1' => 'oeu', 'Oeu052370.1' => 'oeu', 'Os01g0210400' => 'osa', 'Os01g0304300' => 'osa', 'Os01g0749100' => 'osa', 'Os02g0745800' => 'osa', 'Os03g0769050' => 'osa', 'Os05g0531500' => 'osa', 'Os06g0724300' => 'osa', 'Os11g0198100' => 'osa', 'Peaxi162Scf00069g01425' => 'pax', 'Peaxi162Scf00280g00811' => 'pax', 'Peaxi162Scf00310g00615' => 'pax', 'Peaxi162Scf00362g00542' => 'pax', 'Peaxi162Scf00461g00310' => 'pax', 'Peaxi162Scf00530g00118' => 'pax', 'Peaxi162Scf00541g00057' => 'pax', 'Peaxi162Scf00661g00017' => 'pax', 'Peaxi162Scf00926g00027' => 'pax', 'Peaxi162Scf01064g00263' => 'pax', 'Peaxi162Scf01211g00135' => 'pax', 'PGR004G2336' => 'pgr', 'PGR042G0327' => 'pgr', 'PGR042G1957' => 'pgr', 'PGR042G2003' => 'pgr', 'PGR042G3929' => 'pgr', 'PGR083G1137' => 'pgr', 'PGR083G1364' => 'pgr', 'PGSC0003DMG400003381' => 'stu', 'PGSC0003DMG400003417' => 'stu', 'PGSC0003DMG400008981' => 'stu', 'PGSC0003DMG400012417' => 'stu', 'PGSC0003DMG400012823' => 'stu', 'PGSC0003DMG400016885' => 'stu', 'PGSC0003DMG400022812' => 'stu', 'PGSC0003DMG400029726' => 'stu', 'PGSC0003DMG401009243' => 'stu', 'PGSC0003DMG401031505' => 'stu', 'PGSC0003DMG402031505' => 'stu', 'Phvul.001G017600' => 'pvu', 'Phvul.002G193500' => 'pvu', 'Phvul.002G228900' => 'pvu', 'Phvul.002G236800' => 'pvu', 'Phvul.003G049500' => 'pvu', 'Phvul.005G072000' => 'pvu', 'Phvul.006G164800' => 'pvu', 'Phvul.006G185100' => 'pvu', 'Phvul.007G090000' => 'pvu', 'Potri.001G399800' => 'ptr', 'Potri.002G149900' => 'ptr', 'Potri.004G044100' => 'ptr', 'Potri.004G177600' => 'ptr', 'Potri.009G138000' => 'ptr', 'Potri.010G094000' => 'ptr', 'Potri.011G053000' => 'ptr', 'Potri.011G119300' => 'ptr', 'Potri.013G113700' => 'ptr', 'Potri.018G107800' => 'ptr', 'Potri.019G084100' => 'ptr', 'Pp3c14_23720' => 'ppa', 'Pp3c16_6340' => 'ppa', 'Pp3c23_13420' => 'ppa', 'Pp3c24_2740' => 'ppa', 'Pp3c25_860' => 'ppa', 'Pp3c8_21750' => 'ppa', 'Prupe.1G273000' => 'ppe', 'Prupe.1G273700' => 'ppe', 'Prupe.1G274100' => 'ppe', 'Prupe.2G023300' => 'ppe', 'Prupe.4G048000' => 'ppe', 'Prupe.4G080400' => 'ppe', 'Prupe.4G181200' => 'ppe', 'Prupe.8G056900' => 'ppe', 'Prupe.8G168700' => 'ppe', 'Psat1g189080' => 'psa', 'Psat1g204760' => 'psa', 'Psat4g175560' => 'psa', 'Psat4g177720' => 'psa', 'Psat5g244240' => 'psa', 'Psat6g010720' => 'psa', 'Psat6g187200' => 'psa', 'Psat7g072040' => 'psa', 'PSO017G3501' => 'pso', 'PSO063G2148' => 'pso', 'PSO063G5608' => 'pso', 'PSO210G6392' => 'pso', 'PSO541G2319' => 'pso', 'PSO541G2836' => 'pso', 'PSO541G4012' => 'pso', 'PSO541G6253' => 'pso', 'PSO675G0580' => 'pso', 'PSO675G0856' => 'pso', 'PSO675G5635' => 'pso', 'PSO675G9157' => 'pso', 'PSO832G1660' => 'pso', 'PSO832G1969' => 'pso', 'QL02p007186' => 'qlo', 'QL02p033904' => 'qlo', 'QL03p064391' => 'qlo', 'QL05p040593' => 'qlo', 'QL05p058242' => 'qlo', 'QL08p021825' => 'qlo', 'QL11p004981' => 'qlo', 'RcHm_v2.0_Chr1g0318301' => 'rch', 'RcHm_v2.0_Chr4g0418501' => 'rch', 'RcHm_v2.0_Chr4g0439971' => 'rch', 'RcHm_v2.0_Chr5g0008541' => 'rch', 'RcHm_v2.0_Chr5g0014101' => 'rch', 'RcHm_v2.0_Chr5g0014131' => 'rch', 'RcHm_v2.0_Chr5g0033621' => 'rch', 'RcHm_v2.0_Chr6g0272041' => 'rch', 'RcHm_v2.0_Chr6g0278831' => 'rch', 'Rhsim02G0130400' => 'rsi', 'Rhsim02G0171100' => 'rsi', 'Rhsim05G0053000' => 'rsi', 'Rhsim05G0053100' => 'rsi', 'Rhsim06G0096500' => 'rsi', 'Rhsim06G0096600' => 'rsi', 'Rhsim06G0199100' => 'rsi', 'Rhsim12G0062300' => 'rsi', 'Rhsim12G0062800' => 'rsi', 'Sabra02G0118600' => 'sbr', 'Sabra04G0027300' => 'sbr', 'Sabra04G0119500' => 'sbr', 'Sabra08G0112500' => 'sbr', 'Sabra11G0036800' => 'sbr', 'Sabra11G0103800' => 'sbr', 'Sabra13G0096300' => 'sbr', 'Sabra16G0262300' => 'sbr', 'Sabra18G0091700' => 'sbr', 'Sabra19G0095400' => 'sbr', 'SalBow6G3080' => 'sbo', 'SalBow7G1157' => 'sbo', 'SalBow7G2123' => 'sbo', 'SalBow7G2285' => 'sbo', 'SalBow7G3537' => 'sbo', 'SalBow8G2947' => 'sbo', 'SalBow8G4463' => 'sbo', 'SalBow8G5466' => 'sbo', 'Sc01g0001750' => 'sci', 'Sc02g0006640' => 'sci', 'Sc02g0006670' => 'sci', 'Sc04g0008220' => 'sci', 'Sc05g0006190' => 'sci', 'Sc08g0002760' => 'sci', 'Sc17g0006170' => 'sci', 'Sc22g0002050' => 'sci', 'Sc23g0001190' => 'sci', 'Sc24g0000980' => 'sci', 'Sed0006245' => 'sed', 'Sed0007543' => 'sed', 'Sed0009411' => 'sed', 'Sed0010765' => 'sed', 'Sed0012944' => 'sed', 'Sed0014682' => 'sed', 'Sed0016174' => 'sed', 'Sed0016796' => 'sed', 'Sed0020317' => 'sed', 'Sed0021467' => 'sed', 'SEGI_01316' => 'sgi', 'SEGI_03374' => 'sgi', 'SEGI_16265' => 'sgi', 'SEGI_18569' => 'sgi', 'SEGI_20351' => 'sgi', 'SEGI_26395' => 'sgi', 'SEGI_29469' => 'sgi', 'SEGI_34771' => 'sgi', 'SEGI_36769' => 'sgi', 'SEGI_37139' => 'sgi', 'SGA_v2.0_scaffold100G29687' => 'sas', 'SGA_v2.0_scaffold118G32472' => 'sas', 'SGA_v2.0_scaffold14G07051' => 'sas', 'SGA_v2.0_scaffold183G39845' => 'sas', 'SGA_v2.0_scaffold1G00174' => 'sas', 'SGA_v2.0_scaffold22G09714' => 'sas', 'SGA_v2.0_scaffold333G48992' => 'sas', 'SGA_v2.0_scaffold46G17491' => 'sas', 'SGA_v2.0_scaffold49G18294' => 'sas', 'SGA_v2.0_scaffold63G21658' => 'sas', 'SHI01741' => 'shi', 'SHI05771' => 'shi', 'SHI18077' => 'shi', 'SHI20525' => 'shi', 'SHI20527' => 'shi', 'SHI20528' => 'shi', 'SMO172G0185' => 'smo', 'SMO198G0020' => 'smo', 'SMO351G0006' => 'smo', 'SMO356G0118' => 'smo', 'SMO358G0296' => 'smo', 'SMO367G0079' => 'smo', 'SMO367G1277' => 'smo', 'Solyc01g014220.3' => 'sly', 'Solyc01g111770.2' => 'sly', 'Solyc02g078180.3' => 'sly', 'Solyc03g006430.3' => 'sly', 'Solyc03g006456.1' => 'sly', 'Solyc03g079860.2' => 'sly', 'Solyc04g079770.3' => 'sly', 'Solyc05g007430.4' => 'sly', 'Solyc07g063150.3' => 'sly', 'Solyc08g016620.3' => 'sly', 'Solyc09g057590.3' => 'sly', 'Solyc09g057600.1' => 'sly', 'Solyc10g009050.3' => 'sly', 'Solyc11g017420.2' => 'sly', 'Sopen01g053810' => 'spe', 'Sopen02g023040' => 'spe', 'Sopen03g002440' => 'spe', 'Sopen04g033350' => 'spe', 'Sopen05g003310' => 'spe', 'Sopen07g004050' => 'spe', 'Sopen07g031340' => 'spe', 'Sopen08g006990' => 'spe', 'Sopen10g004830' => 'spe', 'Sopen11g009370' => 'spe', 'Sp1g24450' => 'spa', 'Sp1g29670' => 'spa', 'Sp1g39600' => 'spa', 'Sp2g11080' => 'spa', 'Sp2g13970' => 'spa', 'Sp4g16130' => 'spa', 'Sp6g13080' => 'spa', 'Sp7g37270' => 'spa', 'TAR371G0065' => 'tar', 'TAR376G0340' => 'tar', 'TAR376G0435' => 'tar', 'TAR381G0002' => 'tar', 'TAR381G1236' => 'tar', 'TAR624G0055' => 'tar', 'TAR624G0324' => 'tar', 'TAR624G0696' => 'tar', 'TAR624G0906' => 'tar', 'TAR625G0107' => 'tar', 'TAR626G0015' => 'tar', 'TAR626G1356' => 'tar', 'TAR627G0888' => 'tar', 'TAR628G0399' => 'tar', 'TAR628G1327' => 'tar', 'TAR629G2831' => 'tar', 'TAR629G2874' => 'tar', 'TAR633G1432' => 'tar', 'TAR633G2771' => 'tar', 'THA.LOC104803394' => 'tha', 'THA.LOC104805153' => 'tha', 'THA.LOC104806784' => 'tha', 'THA.LOC104810473' => 'tha', 'THA.LOC104813100' => 'tha', 'THA.LOC104814215' => 'tha', 'THA.LOC104815554' => 'tha', 'THA.LOC104820544' => 'tha', 'THA.LOC104824754' => 'tha', 'THA.LOC104827717' => 'tha', 'Thecc.02G031400' => 'tca', 'Thecc.02G055900' => 'tca', 'Thecc.02G350800' => 'tca', 'Thecc.06G150900' => 'tca', 'Thecc.06G186600' => 'tca', 'Thecc.07G089600' => 'tca', 'Thecc.08G020400' => 'tca', 'Thecc.08G182100' => 'tca', 'Thhalv10000873m.g' => 'esa', 'Thhalv10004185m.g' => 'esa', 'Thhalv10006981m.g' => 'esa', 'Thhalv10007204m.g' => 'esa', 'Thhalv10011374m.g' => 'esa', 'Thhalv10013482m.g' => 'esa', 'Thhalv10017801m.g' => 'esa', 'Thhalv10024983m.g' => 'esa', 'TPR.G12072' => 'tpr', 'TPR.G15769' => 'tpr', 'TPR.G16504' => 'tpr', 'TPR.G16506' => 'tpr', 'TPR.G24345' => 'tpr', 'TPR.G26666' => 'tpr', 'TPR.G27320' => 'tpr', 'TPR.G31819' => 'tpr', 'TPR.G38879' => 'tpr', 'TPR.G39015' => 'tpr', 'TPR.G8819' => 'tpr', 'TWI09G0924' => 'twi', 'TWI12G0811' => 'twi', 'TWI12G1294' => 'twi', 'TWI31G0150' => 'twi', 'TWI36G1262' => 'twi', 'TWI38G1287' => 'twi', 'TWI38G1633' => 'twi', 'TWI38G1982' => 'twi', 'TWI39G0116' => 'twi', 'TWI60G1011' => 'twi', 'TWI63G0171' => 'twi', 'TWI73G0839' => 'twi', 'TWI79G1511' => 'twi', 'unitig_0.g915' => 'ugi', 'unitig_0.g916' => 'ugi', 'unitig_21.g20219' => 'ugi', 'unitig_21.g20416' => 'ugi', 'unitig_578.g16132' => 'ugi', 'unitig_578.g16718' => 'ugi', 'unitig_62.g23481' => 'ugi', 'unitig_744.g24535' => 'ugi', 'unitig_749.g13525' => 'ugi', 'vmacro01248' => 'vma', 'vmacro02290' => 'vma', 'vmacro10946' => 'vma', 'vmacro11865' => 'vma', 'vmacro12493' => 'vma', 'vmacro17322' => 'vma', 'vmacro21599' => 'vma', 'vmacro23041' => 'vma', 'VMungo0251G0004' => 'vmu', 'VMungo0251G2639' => 'vmu', 'VMungo0251G2967' => 'vmu', 'VMungo0540G0864' => 'vmu', 'VMungo0540G1569' => 'vmu', 'VMungo0647G0317' => 'vmu', 'VMungo0720G1373' => 'vmu', 'VMungo0720G1508' => 'vmu', 'VMungo1080G0485' => 'vmu', 'VMungo1215G3177' => 'vmu', 'Zm00001eb112600' => 'zma', 'Zm00001eb120220' => 'zma', 'Zm00001eb153240' => 'zma', 'Zm00001eb168880' => 'zma', 'Zm00001eb213920' => 'zma', 'Zm00001eb228280' => 'zma', 'Zm00001eb254580' => 'zma', 'Zm00001eb272180' => 'zma', 'Zm00001eb293190' => 'zma', 'Zm00001eb322930' => 'zma', 'Zm00001eb353360' => 'zma', 'Zm00001eb353390' => 'zma', 'Zm00001eb353430' => 'zma', 'Zm00001eb353440' => 'zma', 'Zm00001eb353780' => 'zma' ) $gf_id = 'HOM05D000499' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000499' ) $data_identifier = 'HOM05D000499' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 29, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 12, 'amhyb' => (int) 8, 'aly' => (int) 12, 'aox' => (int) 9, 'arhy' => (int) 26, 'ath' => (int) 8, 'atr' => (int) 7, 'acertr' => (int) 10, 'cqu' => (int) 15, 'bca' => (int) 29, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 11, 'cansat' => (int) 8, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 9, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 8, 'cpa' => (int) 10, 'csa' => (int) 7, 'camsi' => (int) 20, 'dca' => (int) 8, 'din' => (int) 12, 'dzi' => (int) 14, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 6, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 38, 'gra' => (int) 16, 'vvi' => (int) 8, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 5, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 11, 'lja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 11, 'mpo' => (int) 3, 'mbi' => (int) 14, 'mdo' => (int) 14, 'mtr' => (int) 8, 'cme' => (int) 9, 'egut' => (int) 9, 'ama' => (int) 11, 'nta' => (int) 17, 'nnu' => (int) 11, 'oeu' => (int) 18, 'osa' => (int) 8, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 6, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 9, 'rsi' => (int) 9, 'sbr' => (int) 10, 'sbo' => (int) 8, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 10, 'sas' => (int) 10, 'shi' => (int) 6, 'smo' => (int) 7, 'sly' => (int) 14, 'spe' => (int) 10, 'spa' => (int) 8, 'tar' => (int) 19, 'tha' => (int) 10, 'tca' => (int) 8, 'esa' => (int) 8, 'tpr' => (int) 11, 'twi' => (int) 13, 'ugi' => (int) 9, 'vma' => (int) 8, 'vmu' => (int) 10, 'zma' => (int) 15 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb353780' $species_info = array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) $local_species = 'zma' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000499', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1066', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p29780' => 'bna', 'A02p33180' => 'bna', 'A03p16470' => 'bna', 'A03p66010' => 'bna', 'A04p25970' => 'bna', 'A06p01270' => 'bna', 'A06p46080' => 'bna', 'A07p11400' => 'bna', 'A08p01840' => 'bna', 'A08p08230' => 'bna', 'A08p25740' => 'bna', 'A09p32070' => 'bna', 'A09p37830' => 'bna', 'A09p42840' => 'bna', 'A09p42850' => 'bna', 'Aa31LG10G2060' => 'aar', 'Aa31LG2G7410' => 'aar', 'Aa31LG6G10200' => 'aar', 'Aa31LG6G16680' => 'aar', 'Aa31LG6G8470' => 'aar', 'Aa31LG9G12730' => 'aar', 'Aa31LG9G13680' => 'aar', 'Aa31LG9G14920' => 'aar', 'Aa31LG9G6650' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4977' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5467' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3254' => 'aag', 'Actinidia02578' => 'ach', 'Actinidia07693' => 'ach', 'Actinidia08413' => 'ach', 'Actinidia08414' => 'ach', 'Actinidia15289' => 'ach', 'Actinidia19871' => 'ach', 'Actinidia21475' => 'ach', 'Actinidia22576' => 'ach', 'Actinidia28327' => 'ach', 'Actinidia32491' => 'ach', 'Actinidia39463' => 'ach', 'Actinidia39571' => 'ach', 'Ah.01g013750' => 'amhyb', 'Ah.01g023210' => 'amhyb', 'Ah.04g164850' => 'amhyb', 'Ah.05g178060' => 'amhyb', 'Ah.07g204270' => 'amhyb', 'Ah.07g208480' => 'amhyb', 'Ah.09g237410' => 'amhyb', 'Ah.14g089460' => 'amhyb', 'AL1G41790' => 'aly', 'AL1G49050' => 'aly', 'AL1G53810' => 'aly', 'AL1G61400' => 'aly', 'AL4G18580' => 'aly', 'AL5G12510' => 'aly', 'AL5G12540' => 'aly', 'AL6G43230' => 'aly', 'AL7G10370' => 'aly', 'AL7G19250' => 'aly', 'AL8G12240' => 'aly', 'AL8G18540' => 'aly', 'Aqoxy1G02409' => 'aox', 'Aqoxy2G03993' => 'aox', 'Aqoxy3G03357' => 'aox', 'Aqoxy4G00785' => 'aox', 'Aqoxy5G02598' => 'aox', 'Aqoxy6G00132' => 'aox', 'Aqoxy7G01776' => 'aox', 'Aqoxy7G02316' => 'aox', 'Aqoxy7G03973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.12AFKW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B8730' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27IQR1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3F75VG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3RE0GA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41TCQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.527VTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FIR39' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5W8UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DA38EV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ63HS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H1I32C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HC27T5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4M8AP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7N3CZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9UVDZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LS1NQA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT1D4B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SKC4TM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCFV76' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF9Q1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQWD9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1ZM88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WE07RT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YCK7VH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJE6Q6' => 'arhy', 'AT1G28240' => 'ath', 'AT1G34550' => 'ath', 'AT1G53040' => 'ath', 'AT2G02910' => 'ath', 'AT4G09630' => 'ath', 'AT4G38500' => 'ath', 'AT5G42660' => 'ath', 'AT5G46220' => 'ath', 'ATR0152G026' => 'atr', 'ATR0564G343' => 'atr', 'ATR0706G151' => 'atr', 'ATR0733G207' => 'atr', 'ATR0751G234' => 'atr', 'ATR0807G048' => 'atr', 'ATR1091G084' => 'atr', 'Atru.chr10.1229' => 'acertr', 'Atru.chr10.1230' => 'acertr', 'Atru.chr10.1874' => 'acertr', 'Atru.chr11.1808' => 'acertr', 'Atru.chr13.1795' => 'acertr', 'Atru.chr13.570' => 'acertr', 'Atru.chr2.2608' => 'acertr', 'Atru.chr2.2609' => 'acertr', 'Atru.chr5.3428' => 'acertr', 'Atru.chr8.1171' => 'acertr', 'AUR62004651' => 'cqu', 'AUR62008675' => 'cqu', 'AUR62010014' => 'cqu', 'AUR62013004' => 'cqu', 'AUR62014825' => 'cqu', 'AUR62015015' => 'cqu', 'AUR62015151' => 'cqu', 'AUR62017020' => 'cqu', 'AUR62019422' => 'cqu', 'AUR62023570' => 'cqu', 'AUR62025571' => 'cqu', 'AUR62029098' => 'cqu', 'AUR62033863' => 'cqu', 'AUR62034296' => 'cqu', 'AUR62040075' => 'cqu', 'BcaB02g07334' => 'bca', 'BcaB02g10575' => 'bca', 'BcaB03g12119' => 'bca', 'BcaB03g12120' => 'bca', 'BcaB03g13945' => 'bca', 'BcaB04g17123' => 'bca', 'BcaB04g17867' => 'bca', 'BcaB04g19839' => 'bca', 'BcaB07g30317' => 'bca', 'BcaB07g32432' => 'bca', 'BcaB07g33362' => 'bca', 'BcaB08g36611' => 'bca', 'BcaC01g00028' => 'bca', 'BcaC01g01356' => 'bca', 'BcaC01g02034' => 'bca', 'BcaC01g06051' => 'bca', 'BcaC03g16839' => 'bca', 'BcaC03g17176' => 'bca', 'BcaC05g26829' => 'bca', 'BcaC06g31490' => 'bca', 'BcaC06g35344' => 'bca', 'BcaC06g36570' => 'bca', 'BcaC07g37537' => 'bca', 'BcaC08g43491' => 'bca', 'BcaC08g43773' => 'bca', 'BcaNung00234' => 'bca', 'BcaNung01982' => 'bca', 'BcaNung03707' => 'bca', 'BcaNung06454' => 'bca', 'BolC2t10762H' => 'bol', 'BolC2t11191H' => 'bol', 'BolC3t14322H' => 'bol', 'BolC3t19747H' => 'bol', 'BolC3t21425H' => 'bol', 'BolC4t27800H' => 'bol', 'BolC5t31423H' => 'bol', 'BolC6t35951H' => 'bol', 'BolC6t36282H' => 'bol', 'BolC7t40678H' => 'bol', 'BolC7t40679H' => 'bol', 'BolC7t42222H' => 'bol', 'BolC7t43492H' => 'bol', 'BolC7t46785H' => 'bol', 'BolC8t47853H' => 'bol', 'BolC9t56805H' => 'bol', 'BraA02t08000Z' => 'bra', 'BraA02t08341Z' => 'bra', 'BraA03t10936Z' => 'bra', 'BraA03t15657Z' => 'bra', 'BraA04t18100Z' => 'bra', 'BraA05t20523Z' => 'bra', 'BraA06t23353Z' => 'bra', 'BraA06t27473Z' => 'bra', 'BraA06t27769Z' => 'bra', 'BraA07t28928Z' => 'bra', 'BraA08t32236Z' => 'bra', 'BraA08t32841Z' => 'bra', 'BraA08t34524Z' => 'bra', 'BraA09t38742Z' => 'bra', 'BraA09t39295Z' => 'bra', 'C02p47180' => 'bna', 'C02p50990' => 'bna', 'C03p19360' => 'bna', 'C03p74950' => 'bna', 'C03p91000' => 'bna', 'C04p63260' => 'bna', 'C05p27050' => 'bna', 'C06p08750' => 'bna', 'C06p11490' => 'bna', 'C07p02820' => 'bna', 'C07p17180' => 'bna', 'C07p29440' => 'bna', 'C07p63730' => 'bna', 'C09p39260' => 'bna', 'CAN.G1164.34' => 'can', 'CAN.G1164.39' => 'can', 'CAN.G1530.3' => 'can', 'CAN.G162.61' => 'can', 'CAN.G176.6' => 'can', 'CAN.G289.49' => 'can', 'CAN.G370.21' => 'can', 'CAN.G370.22' => 'can', 'CAN.G371.117' => 'can', 'CAN.G58.37' => 'can', 'CAN.G588.98' => 'can', 'CANSAT21G2266' => 'cansat', 'CANSAT25G2799' => 'cansat', 'CANSAT35G0862' => 'cansat', 'CANSAT35G1704' => 'cansat', 'CANSAT35G1760' => 'cansat', 'CANSAT56G3971' => 'cansat', 'CANSAT56G4116' => 'cansat', 'CANSAT80G1259' => 'cansat', 'CARHR027730' => 'chi', 'CARHR033880' => 'chi', 'CARHR043270' => 'chi', 'CARHR145330' => 'chi', 'CARHR145340' => 'chi', 'CARHR175570' => 'chi', 'CARHR181570' => 'chi', 'CARHR258470' => 'chi', 'CARHR260490' => 'chi', 'CARHR294220' => 'chi', 'Carub.0001s2668' => 'cru', 'Carub.0001s3257' => 'cru', 'Carub.0001s4220' => 'cru', 'Carub.0005s0179' => 'cru', 'Carub.0006s2807' => 'cru', 'Carub.0007s0039' => 'cru', 'Carub.0008s0169' => 'cru', 'Carub.0008s0636' => 'cru', 'Ca_00338_v3' => 'car', 'Ca_00542_v3' => 'car', 'Ca_01844_v3' => 'car', 'Ca_10611_v3' => 'car', 'Ca_13326_v3' => 'car', 'Ca_17944_v3' => 'car', 'Ca_18546_v3' => 'car', 'Ca_24219_v3' => 'car', 'Ca_29972_v3' => 'car', 'CBR_g3681' => 'cbr', 'CBR_g40021' => 'cbr', 'Cc01_g08140' => 'ccan', 'Cc02_g13410' => 'ccan', 'Cc02_g37480' => 'ccan', 'Cc05_g12030' => 'ccan', 'Cc09_g03370' => 'ccan', 'Cc09_g10300' => 'ccan', 'Cc10_g03530' => 'ccan', 'Cc10_g11380' => 'ccan', 'CDE01G0176' => 'cde', 'CDE02G0675' => 'cde', 'CDE02G0942' => 'cde', 'CDE02G1153' => 'cde', 'CDE02G4177' => 'cde', 'CDE04G2117' => 'cde', 'CDE04G2736' => 'cde', 'CDE08G1161' => 'cde', 'CDE09G1238' => 'cde', 'Cfa000467' => 'cfa', 'Cfa000947' => 'cfa', 'Cfa004969' => 'cfa', 'Cfa005284' => 'cfa', 'Cfa008993' => 'cfa', 'Cfa018187' => 'cfa', 'Cfa018454' => 'cfa', 'Cfa020585' => 'cfa', 'Ciclev10000424m.g' => 'ccl', 'Ciclev10003605m.g' => 'ccl', 'Ciclev10007828m.g' => 'ccl', 'Ciclev10014620m.g' => 'ccl', 'Ciclev10015169m.g' => 'ccl', 'Ciclev10018291m.g' => 'ccl', 'Ciclev10028256m.g' => 'ccl', 'Ciclev10033822m.g' => 'ccl', 'CiPaw.05G060300' => 'cil', 'CiPaw.05G085000' => 'cil', 'CiPaw.06G083700' => 'cil', 'CiPaw.06G120300' => 'cil', 'CiPaw.09G060500' => 'cil', 'CiPaw.09G123800' => 'cil', 'CiPaw.11G169700' => 'cil', 'CiPaw.12G118300' => 'cil', 'CiPaw.15G071000' => 'cil', 'CiPaw.15G081900' => 'cil', 'ClCG01G024610' => 'cla', 'ClCG03G006070' => 'cla', 'ClCG05G019250' => 'cla', 'ClCG09G009500' => 'cla', 'ClCG11G008200' => 'cla', 'ClCG11G018080' => 'cla', 'COL.COLO4_17373' => 'col', 'COL.COLO4_22994' => 'col', 'COL.COLO4_26389' => 'col', 'COL.COLO4_27170' => 'col', 'COL.COLO4_31074' => 'col', 'COL.COLO4_31465' => 'col', 'COL.COLO4_36438' => 'col', 'COL.COLO4_36439' => 'col', 'Cpa.g.c38781' => 'cpa', 'Cpa.g.sc128.12' => 'cpa', 'Cpa.g.sc166.7' => 'cpa', 'Cpa.g.sc166.8' => 'cpa', 'Cpa.g.sc20.111' => 'cpa', 'Cpa.g.sc27.31' => 'cpa', 'Cpa.g.sc64.36' => 'cpa', 'Cpa.g.sc64.37' => 'cpa', 'Cpa.g.sc66.49' => 'cpa', 'Cpa.g.sc80.64' => 'cpa', 'CsaV3_1G012320' => 'csa', 'CsaV3_2G008480' => 'csa', 'CsaV3_2G033450' => 'csa', 'CsaV3_3G044830' => 'csa', 'CsaV3_4G033710' => 'csa', 'CsaV3_6G051730' => 'csa', 'CsaV3_7G025350' => 'csa', 'CSS0001067' => 'camsi', 'CSS0005996' => 'camsi', 'CSS0006590' => 'camsi', 'CSS0009673' => 'camsi', 'CSS0010201' => 'camsi', 'CSS0010549' => 'camsi', 'CSS0011364' => 'camsi', 'CSS0014473' => 'camsi', 'CSS0014961' => 'camsi', 'CSS0020191' => 'camsi', 'CSS0021165' => 'camsi', 'CSS0022306' => 'camsi', 'CSS0030591' => 'camsi', 'CSS0030696' => 'camsi', 'CSS0032653' => 'camsi', 'CSS0037487' => 'camsi', 'CSS0041102' => 'camsi', 'CSS0041261' => 'camsi', 'CSS0046246' => 'camsi', 'CSS0049256' => 'camsi', 'DCAR_004075' => 'dca', 'DCAR_011538' => 'dca', 'DCAR_019553' => 'dca', 'DCAR_020952' => 'dca', 'DCAR_021739' => 'dca', 'DCAR_027407' => 'dca', 'DCAR_027913' => 'dca', 'DCAR_028066' => 'dca', 'Dinv05899' => 'din', 'Dinv07563' => 'din', 'Dinv08010' => 'din', 'Dinv14125' => 'din', 'Dinv20172' => 'din', 'Dinv30743' => 'din', 'Dinv31229' => 'din', 'Dinv34162' => 'din', 'Dinv36028' => 'din', 'Dinv39368' => 'din', 'Dinv40565' => 'din', 'Dinv41706' => 'din', 'Duzib052G0089' => 'dzi', 'Duzib116G0641' => 'dzi', 'Duzib132G0069' => 'dzi', 'Duzib132G1219' => 'dzi', 'Duzib147G0278' => 'dzi', 'Duzib160G0480' => 'dzi', 'Duzib170G0661' => 'dzi', 'Duzib177G0591' => 'dzi', 'Duzib187G1353' => 'dzi', 'Duzib192G0858' => 'dzi', 'Duzib192G0883' => 'dzi', 'Duzib213G0506' => 'dzi', 'Duzib235G0289' => 'dzi', 'Duzib251G0422' => 'dzi', 'ECA232G3898' => 'eca', 'ECA233G5950' => 'eca', 'ECA234G1699' => 'eca', 'ECA234G2421' => 'eca', 'ECA236G0426' => 'eca', 'ECA236G4331' => 'eca', 'ECA248G2573' => 'eca', 'EL10Ac1g00077' => 'bvu', 'EL10Ac1g01746' => 'bvu', 'EL10Ac2g03464' => 'bvu', 'EL10Ac4g08176' => 'bvu', 'EL10Ac7g17521' => 'bvu', 'EL10Ac8g20386' => 'bvu', 'EL10Ac9g21343' => 'bvu', 'EL10Ac9g22688' => 'bvu', 'Eucgr.B03434' => 'egr', 'Eucgr.D00618' => 'egr', 'Eucgr.E02395' => 'egr', 'Eucgr.F01129' => 'egr', 'Eucgr.F02622' => 'egr', 'Eucgr.F04207' => 'egr', 'FAN01G0570' => 'fan', 'FAN03G3351' => 'fan', 'FAN06G3702' => 'fan', 'FAN07G2149' => 'fan', 'FAN10G3758' => 'fan', 'FAN11G1170' => 'fan', 'FAN11G2050' => 'fan', 'FAN11G2724' => 'fan', 'FAN12G1700' => 'fan', 'FAN12G2028' => 'fan', 'FAN15G1160' => 'fan', 'FAN15G3063' => 'fan', 'FAN16G2540' => 'fan', 'FAN16G3077' => 'fan', 'FAN16G3624' => 'fan', 'FAN17G0221' => 'fan', 'FAN20G2492' => 'fan', 'FAN20G2905' => 'fan', 'FAN21G0548' => 'fan', 'FAN21G1300' => 'fan', 'FAN22G0077' => 'fan', 'FAN22G1315' => 'fan', 'FAN24G1280' => 'fan', 'FAN24G1445' => 'fan', 'FAN24G3527' => 'fan', 'FAN25G0464' => 'fan', 'FAN25G2885' => 'fan', 'FAN25G3270' => 'fan', 'FAN27G1101' => 'fan', 'FAN27G2846' => 'fan', 'FAN27G3524' => 'fan', 'FvH4_2g11770' => 'fve', 'FvH4_2g15630' => 'fve', 'FvH4_3g05570' => 'fve', 'FvH4_3g09110' => 'fve', 'FvH4_3g19940' => 'fve', 'FvH4_4g04821' => 'fve', 'FvH4_4g31480' => 'fve', 'FvH4_7g01740' => 'fve', 'Glyma.05G130400' => 'gma', 'Glyma.05G156400' => 'gma', 'Glyma.07G197000' => 'gma', 'Glyma.08G085151' => 'gma', 'Glyma.08G114500' => 'gma', 'Glyma.08G300400' => 'gma', 'Glyma.10G215800' => 'gma', 'Glyma.12G224400' => 'gma', 'Glyma.13G179300' => 'gma', 'Glyma.13G218151' => 'gma', 'Glyma.13G238800' => 'gma', 'Glyma.13G276900' => 'gma', 'Glyma.14G078200' => 'gma', 'Glyma.15G074500' => 'gma', 'Glyma.15G094100' => 'gma', 'Glyma.17G247200' => 'gma', 'Glyma.18G120100' => 'gma', 'Glyma.20G176000' => 'gma', 'Gohir.A01G063600' => 'ghi', 'Gohir.A01G170301' => 'ghi', 'Gohir.A02G060500' => 'ghi', 'Gohir.A05G133850' => 'ghi', 'Gohir.A05G161400' => 'ghi', 'Gohir.A06G012900' => 'ghi', 'Gohir.A06G035901' => 'ghi', 'Gohir.A06G127100' => 'ghi', 'Gohir.A06G210500' => 'ghi', 'Gohir.A08G008650' => 'ghi', 'Gohir.A09G072700' => 'ghi', 'Gohir.A09G088301' => 'ghi', 'Gohir.A10G040600' => 'ghi', 'Gohir.A12G036300' => 'ghi', 'Gohir.A12G143350' => 'ghi', 'Gohir.A12G165500' => 'ghi', 'Gohir.A13G145700' => 'ghi', 'Gohir.D01G050000' => 'ghi', 'Gohir.D01G051366' => 'ghi', 'Gohir.D01G161350' => 'ghi', 'Gohir.D02G065900' => 'ghi', 'Gohir.D05G164200' => 'ghi', 'Gohir.D05G355500' => 'ghi', 'Gohir.D06G010400' => 'ghi', 'Gohir.D06G111250' => 'ghi', 'Gohir.D06G132000' => 'ghi', 'Gohir.D06G210500' => 'ghi', 'Gohir.D07G165675' => 'ghi', 'Gohir.D08G062240' => 'ghi', 'Gohir.D08G086101' => 'ghi', 'Gohir.D08G138060' => 'ghi', 'Gohir.D09G072300' => 'ghi', 'Gohir.D10G041400' => 'ghi', 'Gohir.D11G191020' => 'ghi', 'Gohir.D11G212066' => 'ghi', 'Gohir.D12G036300' => 'ghi', 'Gohir.D12G168600' => 'ghi', 'Gohir.D13G150600' => 'ghi', 'Gorai.001G057300' => 'gra', 'Gorai.002G069900' => 'gra', 'Gorai.002G200000' => 'gra', 'Gorai.003G067600' => 'gra', 'Gorai.005G074800' => 'gra', 'Gorai.006G087300' => 'gra', 'Gorai.008G037500' => 'gra', 'Gorai.008G181400' => 'gra', 'Gorai.009G169400' => 'gra', 'Gorai.009G387900' => 'gra', 'Gorai.010G013300' => 'gra', 'Gorai.010G153800' => 'gra', 'Gorai.010G255800' => 'gra', 'Gorai.011G043700' => 'gra', 'Gorai.011G198900' => 'gra', 'Gorai.013G168400' => 'gra', 'GSVIVG01005212001' => 'vvi', 'GSVIVG01006163001' => 'vvi', 'GSVIVG01009625001' => 'vvi', 'GSVIVG01014338001' => 'vvi', 'GSVIVG01020005001' => 'vvi', 'GSVIVG01021450001' => 'vvi', 'GSVIVG01023975001' => 'vvi', 'GSVIVG01034490001' => 'vvi', 'HanXRQChr04g0112071' => 'han', 'HanXRQChr05g0131151' => 'han', 'HanXRQChr09g0262371' => 'han', 'HanXRQChr09g0268401' => 'han', 'HanXRQChr10g0279241' => 'han', 'HanXRQChr10g0297961' => 'han', 'HanXRQChr11g0326231' => 'han', 'HanXRQChr11g0328471' => 'han', 'HanXRQChr16g0507941' => 'han', 'HanXRQChr17g0560211' => 'han', 'Haze_02108' => 'cav', 'Haze_02428' => 'cav', 'Haze_05593' => 'cav', 'Haze_06448' => 'cav', 'Haze_09427' => 'cav', 'Haze_12022' => 'cav', 'Haze_17612' => 'cav', 'Haze_17928' => 'cav', 'Hma1.2p1_0032F.1_g019250' => 'hma', 'Hma1.2p1_0163F.1_g072690' => 'hma', 'Hma1.2p1_0265F.1_g106710' => 'hma', 'Hma1.2p1_0286F.1_g113970' => 'hma', 'Hma1.2p1_0363F.1_g136640' => 'hma', 'Hma1.2p1_0584F.1_g183470' => 'hma', 'Hma1.2p1_0885F.1_g232570' => 'hma', 'HPP92_006022' => 'vpl', 'HPP92_007320' => 'vpl', 'HPP92_011521' => 'vpl', 'HPP92_019387' => 'vpl', 'HPP92_024038' => 'vpl', 'Hund05891' => 'sun', 'Hund06450' => 'sun', 'Hund12053' => 'sun', 'Hund16800' => 'sun', 'Hund21222' => 'sun', 'Hund22896' => 'sun', 'Hund23746' => 'sun', 'Hund27083' => 'sun', 'Lalb_Chr02g0141831' => 'lal', 'Lalb_Chr02g0141841' => 'lal', 'Lalb_Chr05g0220411' => 'lal', 'Lalb_Chr06g0162081' => 'lal', 'Lalb_Chr09g0327651' => 'lal', 'Lalb_Chr13g0295051' => 'lal', 'Lalb_Chr15g0086801' => 'lal', 'Lalb_Chr16g0383781' => 'lal', 'Lalb_Chr16g0383791' => 'lal', 'Lalb_Chr18g0055441' => 'lal', 'Lalb_Chr18g0059611' => 'lal', 'Lalb_Chr20g0109661' => 'lal', 'Lalb_Chr20g0109831' => 'lal', 'Lalb_Chr20g0121871' => 'lal', 'Lalb_Chr22g0355361' => 'lal', 'Lalb_Chr25g0286371' => 'lal', 'Lj1A1187G43' => 'lonja', 'Lj1A1205T50' => 'lonja', 'Lj1A800G33' => 'lonja', 'Lj1C1187T7' => 'lonja', 'Lj1C843T11' => 'lonja', 'Lj1g0010940' => 'lja', 'Lj2A288T69' => 'lonja', 'Lj3g0024276' => 'lja', 'Lj4A47T76' => 'lonja', 'Lj4g0005805' => 'lja', 'Lj4g0006097' => 'lja', 'Lj4g0008528' => 'lja', 'Lj4g0024907' => 'lja', 'Lj5g0012472' => 'lja', 'Lj5g0018648' => 'lja', 'Lj6C789G1' => 'lonja', 'Lj6g0004000' => 'lja', 'Lj7A292G67' => 'lonja', 'Lj7A292T64' => 'lonja', 'Lj9A400T58' => 'lonja', 'Lsat_1_v5_gn_1_126181' => 'lsa', 'Lsat_1_v5_gn_4_123041' => 'lsa', 'Lsat_1_v5_gn_4_133620' => 'lsa', 'Lsat_1_v5_gn_4_53221' => 'lsa', 'Lsat_1_v5_gn_4_71961' => 'lsa', 'Lsat_1_v5_gn_7_105241' => 'lsa', 'Lsat_1_v5_gn_7_21361' => 'lsa', 'Lsat_1_v5_gn_7_28860' => 'lsa', 'Lsat_1_v5_gn_7_31260' => 'lsa', 'Lsat_1_v5_gn_8_52801' => 'lsa', 'Manes.02G191400' => 'mes', 'Manes.03G110100' => 'mes', 'Manes.04G071100' => 'mes', 'Manes.05G100500' => 'mes', 'Manes.05G164700' => 'mes', 'Manes.15G087000' => 'mes', 'Manes.15G121500' => 'mes', 'Manes.16G028300' => 'mes', 'Manes.17G046100' => 'mes', 'Manes.17G069800' => 'mes', 'Manes.18G100500' => 'mes', 'Mapoly0002s0109' => 'mpo', 'Mapoly0024s0007' => 'mpo', 'Mapoly0089s0032' => 'mpo', 'MBI04_g42241_MAGBIO' => 'mbi', 'MBI05_g11988_MAGBIO' => 'mbi', 'MBI05_g35452_MAGBIO' => 'mbi', 'MBI07_g30179_MAGBIO' => 'mbi', 'MBI07_g35859_MAGBIO' => 'mbi', 'MBI07_g35860_MAGBIO' => 'mbi', 'MBI07_g37166_MAGBIO' => 'mbi', 'MBI08_g18172_MAGBIO' => 'mbi', 'MBI09_g08441_MAGBIO' => 'mbi', 'MBI13_g01676_MAGBIO' => 'mbi', 'MBI14_g42955_MAGBIO' => 'mbi', 'MBI16_g13161_MAGBIO' => 'mbi', 'MBI17_g27204_MAGBIO' => 'mbi', 'MBI19_g21595_MAGBIO' => 'mbi', 'MD00G1148400' => 'mdo', 'MD02G1301200' => 'mdo', 'MD03G1227800' => 'mdo', 'MD05G1041100' => 'mdo', 'MD05G1124800' => 'mdo', 'MD05G1284000' => 'mdo', 'MD05G1338800' => 'mdo', 'MD05G1338900' => 'mdo', 'MD07G1022800' => 'mdo', 'MD10G1047500' => 'mdo', 'MD10G1127500' => 'mdo', 'MD10G1262300' => 'mdo', 'MD10G1293800' => 'mdo', 'MD16G1074300' => 'mdo', 'Medtr1g021670' => 'mtr', 'Medtr1g096320' => 'mtr', 'Medtr2g013690' => 'mtr', 'Medtr2g019450' => 'mtr', 'Medtr2g085170' => 'mtr', 'Medtr4g088785' => 'mtr', 'Medtr8g055930' => 'mtr', 'Medtr8g085850' => 'mtr', 'MELO3C002605.2' => 'cme', 'MELO3C003891.2' => 'cme', 'MELO3C004012.2' => 'cme', 'MELO3C007134.2' => 'cme', 'MELO3C008118.2' => 'cme', 'MELO3C016700.2' => 'cme', 'MELO3C024127.2' => 'cme', 'MELO3C033361.2' => 'cme', 'MELO3C033362.2' => 'cme', 'Migut.C00430' => 'egut', 'Migut.C01246' => 'egut', 'Migut.E00101' => 'egut', 'Migut.H01486' => 'egut', 'Migut.H01939' => 'egut', 'Migut.K00360' => 'egut', 'Migut.M00910' => 'egut', 'Migut.M01139' => 'egut', 'Migut.N02677' => 'egut', 'MSTRG.13252' => 'ama', 'MSTRG.14701' => 'ama', 'MSTRG.1521' => 'ama', 'MSTRG.15884' => 'ama', 'MSTRG.16242' => 'ama', 'MSTRG.22285' => 'ama', 'MSTRG.22444' => 'ama', 'MSTRG.2349' => 'ama', 'MSTRG.26308' => 'ama', 'MSTRG.28296' => 'ama', 'MSTRG.9895' => 'ama', 'Nitab4.5_0000110g0060' => 'nta', 'Nitab4.5_0000420g0130' => 'nta', 'Nitab4.5_0000422g0030' => 'nta', 'Nitab4.5_0000560g0180' => 'nta', 'Nitab4.5_0000703g0100' => 'nta', 'Nitab4.5_0000786g0200' => 'nta', 'Nitab4.5_0001336g0020' => 'nta', 'Nitab4.5_0001796g0030' => 'nta', 'Nitab4.5_0003348g0060' => 'nta', 'Nitab4.5_0003698g0040' => 'nta', 'Nitab4.5_0003942g0090' => 'nta', 'Nitab4.5_0004775g0070' => 'nta', 'Nitab4.5_0004864g0030' => 'nta', 'Nitab4.5_0005615g0020' => 'nta', 'Nitab4.5_0009288g0030' => 'nta', 'Nitab4.5_0009341g0010' => 'nta', 'Nitab4.5_0009535g0010' => 'nta', 'Nn1g03995' => 'nnu', 'Nn1g04100' => 'nnu', 'Nn1g06530' => 'nnu', 'Nn3g16404' => 'nnu', 'Nn3g17212' => 'nnu', 'Nn3g20776' => 'nnu', 'Nn3g21923' => 'nnu', 'Nn5g27737' => 'nnu', 'Nn5g29461' => 'nnu', 'Nn7g38355' => 'nnu', 'Nn8g39873' => 'nnu', 'Oeu000548.2' => 'oeu', 'Oeu004672.1' => 'oeu', 'Oeu015605.2' => 'oeu', 'Oeu016092.1' => 'oeu', 'Oeu017879.3' => 'oeu', 'Oeu024910.1' => 'oeu', 'Oeu028965.1' => 'oeu', 'Oeu031269.1' => 'oeu', 'Oeu031270.1' => 'oeu', 'Oeu032535.1' => 'oeu', 'Oeu034151.1' => 'oeu', 'Oeu034152.1' => 'oeu', 'Oeu034588.2' => 'oeu', 'Oeu050846.1' => 'oeu', 'Oeu050849.2' => 'oeu', 'Oeu051063.2' => 'oeu', 'Oeu052368.1' => 'oeu', 'Oeu052370.1' => 'oeu', 'Os01g0210400' => 'osa', 'Os01g0304300' => 'osa', 'Os01g0749100' => 'osa', 'Os02g0745800' => 'osa', 'Os03g0769050' => 'osa', 'Os05g0531500' => 'osa', 'Os06g0724300' => 'osa', 'Os11g0198100' => 'osa', 'Peaxi162Scf00069g01425' => 'pax', 'Peaxi162Scf00280g00811' => 'pax', 'Peaxi162Scf00310g00615' => 'pax', 'Peaxi162Scf00362g00542' => 'pax', 'Peaxi162Scf00461g00310' => 'pax', 'Peaxi162Scf00530g00118' => 'pax', 'Peaxi162Scf00541g00057' => 'pax', 'Peaxi162Scf00661g00017' => 'pax', 'Peaxi162Scf00926g00027' => 'pax', 'Peaxi162Scf01064g00263' => 'pax', 'Peaxi162Scf01211g00135' => 'pax', 'PGR004G2336' => 'pgr', 'PGR042G0327' => 'pgr', 'PGR042G1957' => 'pgr', 'PGR042G2003' => 'pgr', 'PGR042G3929' => 'pgr', 'PGR083G1137' => 'pgr', 'PGR083G1364' => 'pgr', 'PGSC0003DMG400003381' => 'stu', 'PGSC0003DMG400003417' => 'stu', 'PGSC0003DMG400008981' => 'stu', 'PGSC0003DMG400012417' => 'stu', 'PGSC0003DMG400012823' => 'stu', 'PGSC0003DMG400016885' => 'stu', 'PGSC0003DMG400022812' => 'stu', 'PGSC0003DMG400029726' => 'stu', 'PGSC0003DMG401009243' => 'stu', 'PGSC0003DMG401031505' => 'stu', 'PGSC0003DMG402031505' => 'stu', 'Phvul.001G017600' => 'pvu', 'Phvul.002G193500' => 'pvu', 'Phvul.002G228900' => 'pvu', 'Phvul.002G236800' => 'pvu', 'Phvul.003G049500' => 'pvu', 'Phvul.005G072000' => 'pvu', 'Phvul.006G164800' => 'pvu', 'Phvul.006G185100' => 'pvu', 'Phvul.007G090000' => 'pvu', 'Potri.001G399800' => 'ptr', 'Potri.002G149900' => 'ptr', 'Potri.004G044100' => 'ptr', 'Potri.004G177600' => 'ptr', 'Potri.009G138000' => 'ptr', 'Potri.010G094000' => 'ptr', 'Potri.011G053000' => 'ptr', 'Potri.011G119300' => 'ptr', 'Potri.013G113700' => 'ptr', 'Potri.018G107800' => 'ptr', 'Potri.019G084100' => 'ptr', 'Pp3c14_23720' => 'ppa', 'Pp3c16_6340' => 'ppa', 'Pp3c23_13420' => 'ppa', 'Pp3c24_2740' => 'ppa', 'Pp3c25_860' => 'ppa', 'Pp3c8_21750' => 'ppa', 'Prupe.1G273000' => 'ppe', 'Prupe.1G273700' => 'ppe', 'Prupe.1G274100' => 'ppe', 'Prupe.2G023300' => 'ppe', 'Prupe.4G048000' => 'ppe', 'Prupe.4G080400' => 'ppe', 'Prupe.4G181200' => 'ppe', 'Prupe.8G056900' => 'ppe', 'Prupe.8G168700' => 'ppe', 'Psat1g189080' => 'psa', 'Psat1g204760' => 'psa', 'Psat4g175560' => 'psa', 'Psat4g177720' => 'psa', 'Psat5g244240' => 'psa', 'Psat6g010720' => 'psa', 'Psat6g187200' => 'psa', 'Psat7g072040' => 'psa', 'PSO017G3501' => 'pso', 'PSO063G2148' => 'pso', 'PSO063G5608' => 'pso', 'PSO210G6392' => 'pso', 'PSO541G2319' => 'pso', 'PSO541G2836' => 'pso', 'PSO541G4012' => 'pso', 'PSO541G6253' => 'pso', 'PSO675G0580' => 'pso', 'PSO675G0856' => 'pso', 'PSO675G5635' => 'pso', 'PSO675G9157' => 'pso', 'PSO832G1660' => 'pso', 'PSO832G1969' => 'pso', 'QL02p007186' => 'qlo', 'QL02p033904' => 'qlo', 'QL03p064391' => 'qlo', 'QL05p040593' => 'qlo', 'QL05p058242' => 'qlo', 'QL08p021825' => 'qlo', 'QL11p004981' => 'qlo', 'RcHm_v2.0_Chr1g0318301' => 'rch', 'RcHm_v2.0_Chr4g0418501' => 'rch', 'RcHm_v2.0_Chr4g0439971' => 'rch', 'RcHm_v2.0_Chr5g0008541' => 'rch', 'RcHm_v2.0_Chr5g0014101' => 'rch', 'RcHm_v2.0_Chr5g0014131' => 'rch', 'RcHm_v2.0_Chr5g0033621' => 'rch', 'RcHm_v2.0_Chr6g0272041' => 'rch', 'RcHm_v2.0_Chr6g0278831' => 'rch', 'Rhsim02G0130400' => 'rsi', 'Rhsim02G0171100' => 'rsi', 'Rhsim05G0053000' => 'rsi', 'Rhsim05G0053100' => 'rsi', 'Rhsim06G0096500' => 'rsi', 'Rhsim06G0096600' => 'rsi', 'Rhsim06G0199100' => 'rsi', 'Rhsim12G0062300' => 'rsi', 'Rhsim12G0062800' => 'rsi', 'Sabra02G0118600' => 'sbr', 'Sabra04G0027300' => 'sbr', 'Sabra04G0119500' => 'sbr', 'Sabra08G0112500' => 'sbr', 'Sabra11G0036800' => 'sbr', 'Sabra11G0103800' => 'sbr', 'Sabra13G0096300' => 'sbr', 'Sabra16G0262300' => 'sbr', 'Sabra18G0091700' => 'sbr', 'Sabra19G0095400' => 'sbr', 'SalBow6G3080' => 'sbo', 'SalBow7G1157' => 'sbo', 'SalBow7G2123' => 'sbo', 'SalBow7G2285' => 'sbo', 'SalBow7G3537' => 'sbo', 'SalBow8G2947' => 'sbo', 'SalBow8G4463' => 'sbo', 'SalBow8G5466' => 'sbo', 'Sc01g0001750' => 'sci', 'Sc02g0006640' => 'sci', 'Sc02g0006670' => 'sci', 'Sc04g0008220' => 'sci', 'Sc05g0006190' => 'sci', 'Sc08g0002760' => 'sci', 'Sc17g0006170' => 'sci', 'Sc22g0002050' => 'sci', 'Sc23g0001190' => 'sci', 'Sc24g0000980' => 'sci', 'Sed0006245' => 'sed', 'Sed0007543' => 'sed', 'Sed0009411' => 'sed', 'Sed0010765' => 'sed', 'Sed0012944' => 'sed', 'Sed0014682' => 'sed', 'Sed0016174' => 'sed', 'Sed0016796' => 'sed', 'Sed0020317' => 'sed', 'Sed0021467' => 'sed', 'SEGI_01316' => 'sgi', 'SEGI_03374' => 'sgi', 'SEGI_16265' => 'sgi', 'SEGI_18569' => 'sgi', 'SEGI_20351' => 'sgi', 'SEGI_26395' => 'sgi', 'SEGI_29469' => 'sgi', 'SEGI_34771' => 'sgi', 'SEGI_36769' => 'sgi', 'SEGI_37139' => 'sgi', 'SGA_v2.0_scaffold100G29687' => 'sas', 'SGA_v2.0_scaffold118G32472' => 'sas', 'SGA_v2.0_scaffold14G07051' => 'sas', 'SGA_v2.0_scaffold183G39845' => 'sas', 'SGA_v2.0_scaffold1G00174' => 'sas', 'SGA_v2.0_scaffold22G09714' => 'sas', 'SGA_v2.0_scaffold333G48992' => 'sas', 'SGA_v2.0_scaffold46G17491' => 'sas', 'SGA_v2.0_scaffold49G18294' => 'sas', 'SGA_v2.0_scaffold63G21658' => 'sas', 'SHI01741' => 'shi', 'SHI05771' => 'shi', 'SHI18077' => 'shi', 'SHI20525' => 'shi', 'SHI20527' => 'shi', 'SHI20528' => 'shi', 'SMO172G0185' => 'smo', 'SMO198G0020' => 'smo', 'SMO351G0006' => 'smo', 'SMO356G0118' => 'smo', 'SMO358G0296' => 'smo', 'SMO367G0079' => 'smo', 'SMO367G1277' => 'smo', 'Solyc01g014220.3' => 'sly', 'Solyc01g111770.2' => 'sly', 'Solyc02g078180.3' => 'sly', 'Solyc03g006430.3' => 'sly', 'Solyc03g006456.1' => 'sly', 'Solyc03g079860.2' => 'sly', 'Solyc04g079770.3' => 'sly', 'Solyc05g007430.4' => 'sly', 'Solyc07g063150.3' => 'sly', 'Solyc08g016620.3' => 'sly', 'Solyc09g057590.3' => 'sly', 'Solyc09g057600.1' => 'sly', 'Solyc10g009050.3' => 'sly', 'Solyc11g017420.2' => 'sly', 'Sopen01g053810' => 'spe', 'Sopen02g023040' => 'spe', 'Sopen03g002440' => 'spe', 'Sopen04g033350' => 'spe', 'Sopen05g003310' => 'spe', 'Sopen07g004050' => 'spe', 'Sopen07g031340' => 'spe', 'Sopen08g006990' => 'spe', 'Sopen10g004830' => 'spe', 'Sopen11g009370' => 'spe', 'Sp1g24450' => 'spa', 'Sp1g29670' => 'spa', 'Sp1g39600' => 'spa', 'Sp2g11080' => 'spa', 'Sp2g13970' => 'spa', 'Sp4g16130' => 'spa', 'Sp6g13080' => 'spa', 'Sp7g37270' => 'spa', 'TAR371G0065' => 'tar', 'TAR376G0340' => 'tar', 'TAR376G0435' => 'tar', 'TAR381G0002' => 'tar', 'TAR381G1236' => 'tar', 'TAR624G0055' => 'tar', 'TAR624G0324' => 'tar', 'TAR624G0696' => 'tar', 'TAR624G0906' => 'tar', 'TAR625G0107' => 'tar', 'TAR626G0015' => 'tar', 'TAR626G1356' => 'tar', 'TAR627G0888' => 'tar', 'TAR628G0399' => 'tar', 'TAR628G1327' => 'tar', 'TAR629G2831' => 'tar', 'TAR629G2874' => 'tar', 'TAR633G1432' => 'tar', 'TAR633G2771' => 'tar', 'THA.LOC104803394' => 'tha', 'THA.LOC104805153' => 'tha', 'THA.LOC104806784' => 'tha', 'THA.LOC104810473' => 'tha', 'THA.LOC104813100' => 'tha', 'THA.LOC104814215' => 'tha', 'THA.LOC104815554' => 'tha', 'THA.LOC104820544' => 'tha', 'THA.LOC104824754' => 'tha', 'THA.LOC104827717' => 'tha', 'Thecc.02G031400' => 'tca', 'Thecc.02G055900' => 'tca', 'Thecc.02G350800' => 'tca', 'Thecc.06G150900' => 'tca', 'Thecc.06G186600' => 'tca', 'Thecc.07G089600' => 'tca', 'Thecc.08G020400' => 'tca', 'Thecc.08G182100' => 'tca', 'Thhalv10000873m.g' => 'esa', 'Thhalv10004185m.g' => 'esa', 'Thhalv10006981m.g' => 'esa', 'Thhalv10007204m.g' => 'esa', 'Thhalv10011374m.g' => 'esa', 'Thhalv10013482m.g' => 'esa', 'Thhalv10017801m.g' => 'esa', 'Thhalv10024983m.g' => 'esa', 'TPR.G12072' => 'tpr', 'TPR.G15769' => 'tpr', 'TPR.G16504' => 'tpr', 'TPR.G16506' => 'tpr', 'TPR.G24345' => 'tpr', 'TPR.G26666' => 'tpr', 'TPR.G27320' => 'tpr', 'TPR.G31819' => 'tpr', 'TPR.G38879' => 'tpr', 'TPR.G39015' => 'tpr', 'TPR.G8819' => 'tpr', 'TWI09G0924' => 'twi', 'TWI12G0811' => 'twi', 'TWI12G1294' => 'twi', 'TWI31G0150' => 'twi', 'TWI36G1262' => 'twi', 'TWI38G1287' => 'twi', 'TWI38G1633' => 'twi', 'TWI38G1982' => 'twi', 'TWI39G0116' => 'twi', 'TWI60G1011' => 'twi', 'TWI63G0171' => 'twi', 'TWI73G0839' => 'twi', 'TWI79G1511' => 'twi', 'unitig_0.g915' => 'ugi', 'unitig_0.g916' => 'ugi', 'unitig_21.g20219' => 'ugi', 'unitig_21.g20416' => 'ugi', 'unitig_578.g16132' => 'ugi', 'unitig_578.g16718' => 'ugi', 'unitig_62.g23481' => 'ugi', 'unitig_744.g24535' => 'ugi', 'unitig_749.g13525' => 'ugi', 'vmacro01248' => 'vma', 'vmacro02290' => 'vma', 'vmacro10946' => 'vma', 'vmacro11865' => 'vma', 'vmacro12493' => 'vma', 'vmacro17322' => 'vma', 'vmacro21599' => 'vma', 'vmacro23041' => 'vma', 'VMungo0251G0004' => 'vmu', 'VMungo0251G2639' => 'vmu', 'VMungo0251G2967' => 'vmu', 'VMungo0540G0864' => 'vmu', 'VMungo0540G1569' => 'vmu', 'VMungo0647G0317' => 'vmu', 'VMungo0720G1373' => 'vmu', 'VMungo0720G1508' => 'vmu', 'VMungo1080G0485' => 'vmu', 'VMungo1215G3177' => 'vmu', 'Zm00001eb112600' => 'zma', 'Zm00001eb120220' => 'zma', 'Zm00001eb153240' => 'zma', 'Zm00001eb168880' => 'zma', 'Zm00001eb213920' => 'zma', 'Zm00001eb228280' => 'zma', 'Zm00001eb254580' => 'zma', 'Zm00001eb272180' => 'zma', 'Zm00001eb293190' => 'zma', 'Zm00001eb322930' => 'zma', 'Zm00001eb353360' => 'zma', 'Zm00001eb353390' => 'zma', 'Zm00001eb353430' => 'zma', 'Zm00001eb353440' => 'zma', 'Zm00001eb353780' => 'zma' ), 'gf_id' => 'HOM05D000499', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000499' ), 'data_identifier' => 'HOM05D000499', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000499', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1066', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p29780' => 'bna', 'A02p33180' => 'bna', 'A03p16470' => 'bna', 'A03p66010' => 'bna', 'A04p25970' => 'bna', 'A06p01270' => 'bna', 'A06p46080' => 'bna', 'A07p11400' => 'bna', 'A08p01840' => 'bna', 'A08p08230' => 'bna', 'A08p25740' => 'bna', 'A09p32070' => 'bna', 'A09p37830' => 'bna', 'A09p42840' => 'bna', 'A09p42850' => 'bna', 'Aa31LG10G2060' => 'aar', 'Aa31LG2G7410' => 'aar', 'Aa31LG6G10200' => 'aar', 'Aa31LG6G16680' => 'aar', 'Aa31LG6G8470' => 'aar', 'Aa31LG9G12730' => 'aar', 'Aa31LG9G13680' => 'aar', 'Aa31LG9G14920' => 'aar', 'Aa31LG9G6650' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4977' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5467' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3254' => 'aag', 'Actinidia02578' => 'ach', 'Actinidia07693' => 'ach', 'Actinidia08413' => 'ach', 'Actinidia08414' => 'ach', 'Actinidia15289' => 'ach', 'Actinidia19871' => 'ach', 'Actinidia21475' => 'ach', 'Actinidia22576' => 'ach', 'Actinidia28327' => 'ach', 'Actinidia32491' => 'ach', 'Actinidia39463' => 'ach', 'Actinidia39571' => 'ach', 'Ah.01g013750' => 'amhyb', 'Ah.01g023210' => 'amhyb', 'Ah.04g164850' => 'amhyb', 'Ah.05g178060' => 'amhyb', 'Ah.07g204270' => 'amhyb', 'Ah.07g208480' => 'amhyb', 'Ah.09g237410' => 'amhyb', 'Ah.14g089460' => 'amhyb', 'AL1G41790' => 'aly', 'AL1G49050' => 'aly', 'AL1G53810' => 'aly', 'AL1G61400' => 'aly', 'AL4G18580' => 'aly', 'AL5G12510' => 'aly', 'AL5G12540' => 'aly', 'AL6G43230' => 'aly', 'AL7G10370' => 'aly', 'AL7G19250' => 'aly', 'AL8G12240' => 'aly', 'AL8G18540' => 'aly', 'Aqoxy1G02409' => 'aox', 'Aqoxy2G03993' => 'aox', 'Aqoxy3G03357' => 'aox', 'Aqoxy4G00785' => 'aox', 'Aqoxy5G02598' => 'aox', 'Aqoxy6G00132' => 'aox', 'Aqoxy7G01776' => 'aox', 'Aqoxy7G02316' => 'aox', 'Aqoxy7G03973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.12AFKW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B8730' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27IQR1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3F75VG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3RE0GA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.41TCQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.527VTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7FIR39' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5W8UA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DA38EV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ63HS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H1I32C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HC27T5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I4M8AP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7N3CZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9UVDZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LS1NQA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT1D4B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SKC4TM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCFV76' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF9Q1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQWD9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1ZM88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WE07RT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YCK7VH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZJE6Q6' => 'arhy', 'AT1G28240' => 'ath', 'AT1G34550' => 'ath', 'AT1G53040' => 'ath', 'AT2G02910' => 'ath', 'AT4G09630' => 'ath', 'AT4G38500' => 'ath', 'AT5G42660' => 'ath', 'AT5G46220' => 'ath', 'ATR0152G026' => 'atr', 'ATR0564G343' => 'atr', 'ATR0706G151' => 'atr', 'ATR0733G207' => 'atr', 'ATR0751G234' => 'atr', 'ATR0807G048' => 'atr', 'ATR1091G084' => 'atr', 'Atru.chr10.1229' => 'acertr', 'Atru.chr10.1230' => 'acertr', 'Atru.chr10.1874' => 'acertr', 'Atru.chr11.1808' => 'acertr', 'Atru.chr13.1795' => 'acertr', 'Atru.chr13.570' => 'acertr', 'Atru.chr2.2608' => 'acertr', 'Atru.chr2.2609' => 'acertr', 'Atru.chr5.3428' => 'acertr', 'Atru.chr8.1171' => 'acertr', 'AUR62004651' => 'cqu', 'AUR62008675' => 'cqu', 'AUR62010014' => 'cqu', 'AUR62013004' => 'cqu', 'AUR62014825' => 'cqu', 'AUR62015015' => 'cqu', 'AUR62015151' => 'cqu', 'AUR62017020' => 'cqu', 'AUR62019422' => 'cqu', 'AUR62023570' => 'cqu', 'AUR62025571' => 'cqu', 'AUR62029098' => 'cqu', 'AUR62033863' => 'cqu', 'AUR62034296' => 'cqu', 'AUR62040075' => 'cqu', 'BcaB02g07334' => 'bca', 'BcaB02g10575' => 'bca', 'BcaB03g12119' => 'bca', 'BcaB03g12120' => 'bca', 'BcaB03g13945' => 'bca', 'BcaB04g17123' => 'bca', 'BcaB04g17867' => 'bca', 'BcaB04g19839' => 'bca', 'BcaB07g30317' => 'bca', 'BcaB07g32432' => 'bca', 'BcaB07g33362' => 'bca', 'BcaB08g36611' => 'bca', 'BcaC01g00028' => 'bca', 'BcaC01g01356' => 'bca', 'BcaC01g02034' => 'bca', 'BcaC01g06051' => 'bca', 'BcaC03g16839' => 'bca', 'BcaC03g17176' => 'bca', 'BcaC05g26829' => 'bca', 'BcaC06g31490' => 'bca', 'BcaC06g35344' => 'bca', 'BcaC06g36570' => 'bca', 'BcaC07g37537' => 'bca', 'BcaC08g43491' => 'bca', 'BcaC08g43773' => 'bca', 'BcaNung00234' => 'bca', 'BcaNung01982' => 'bca', 'BcaNung03707' => 'bca', 'BcaNung06454' => 'bca', 'BolC2t10762H' => 'bol', 'BolC2t11191H' => 'bol', 'BolC3t14322H' => 'bol', 'BolC3t19747H' => 'bol', 'BolC3t21425H' => 'bol', 'BolC4t27800H' => 'bol', 'BolC5t31423H' => 'bol', 'BolC6t35951H' => 'bol', 'BolC6t36282H' => 'bol', 'BolC7t40678H' => 'bol', 'BolC7t40679H' => 'bol', 'BolC7t42222H' => 'bol', 'BolC7t43492H' => 'bol', 'BolC7t46785H' => 'bol', 'BolC8t47853H' => 'bol', 'BolC9t56805H' => 'bol', 'BraA02t08000Z' => 'bra', 'BraA02t08341Z' => 'bra', 'BraA03t10936Z' => 'bra', 'BraA03t15657Z' => 'bra', 'BraA04t18100Z' => 'bra', 'BraA05t20523Z' => 'bra', 'BraA06t23353Z' => 'bra', 'BraA06t27473Z' => 'bra', 'BraA06t27769Z' => 'bra', 'BraA07t28928Z' => 'bra', 'BraA08t32236Z' => 'bra', 'BraA08t32841Z' => 'bra', 'BraA08t34524Z' => 'bra', 'BraA09t38742Z' => 'bra', 'BraA09t39295Z' => 'bra', 'C02p47180' => 'bna', 'C02p50990' => 'bna', 'C03p19360' => 'bna', 'C03p74950' => 'bna', 'C03p91000' => 'bna', 'C04p63260' => 'bna', 'C05p27050' => 'bna', 'C06p08750' => 'bna', 'C06p11490' => 'bna', 'C07p02820' => 'bna', 'C07p17180' => 'bna', 'C07p29440' => 'bna', 'C07p63730' => 'bna', 'C09p39260' => 'bna', 'CAN.G1164.34' => 'can', 'CAN.G1164.39' => 'can', 'CAN.G1530.3' => 'can', 'CAN.G162.61' => 'can', 'CAN.G176.6' => 'can', 'CAN.G289.49' => 'can', 'CAN.G370.21' => 'can', 'CAN.G370.22' => 'can', 'CAN.G371.117' => 'can', 'CAN.G58.37' => 'can', 'CAN.G588.98' => 'can', 'CANSAT21G2266' => 'cansat', 'CANSAT25G2799' => 'cansat', 'CANSAT35G0862' => 'cansat', 'CANSAT35G1704' => 'cansat', 'CANSAT35G1760' => 'cansat', 'CANSAT56G3971' => 'cansat', 'CANSAT56G4116' => 'cansat', 'CANSAT80G1259' => 'cansat', 'CARHR027730' => 'chi', 'CARHR033880' => 'chi', 'CARHR043270' => 'chi', 'CARHR145330' => 'chi', 'CARHR145340' => 'chi', 'CARHR175570' => 'chi', 'CARHR181570' => 'chi', 'CARHR258470' => 'chi', 'CARHR260490' => 'chi', 'CARHR294220' => 'chi', 'Carub.0001s2668' => 'cru', 'Carub.0001s3257' => 'cru', 'Carub.0001s4220' => 'cru', 'Carub.0005s0179' => 'cru', 'Carub.0006s2807' => 'cru', 'Carub.0007s0039' => 'cru', 'Carub.0008s0169' => 'cru', 'Carub.0008s0636' => 'cru', 'Ca_00338_v3' => 'car', 'Ca_00542_v3' => 'car', 'Ca_01844_v3' => 'car', 'Ca_10611_v3' => 'car', 'Ca_13326_v3' => 'car', 'Ca_17944_v3' => 'car', 'Ca_18546_v3' => 'car', 'Ca_24219_v3' => 'car', 'Ca_29972_v3' => 'car', 'CBR_g3681' => 'cbr', 'CBR_g40021' => 'cbr', 'Cc01_g08140' => 'ccan', 'Cc02_g13410' => 'ccan', 'Cc02_g37480' => 'ccan', 'Cc05_g12030' => 'ccan', 'Cc09_g03370' => 'ccan', 'Cc09_g10300' => 'ccan', 'Cc10_g03530' => 'ccan', 'Cc10_g11380' => 'ccan', 'CDE01G0176' => 'cde', 'CDE02G0675' => 'cde', 'CDE02G0942' => 'cde', 'CDE02G1153' => 'cde', 'CDE02G4177' => 'cde', 'CDE04G2117' => 'cde', 'CDE04G2736' => 'cde', 'CDE08G1161' => 'cde', 'CDE09G1238' => 'cde', 'Cfa000467' => 'cfa', 'Cfa000947' => 'cfa', 'Cfa004969' => 'cfa', 'Cfa005284' => 'cfa', 'Cfa008993' => 'cfa', 'Cfa018187' => 'cfa', 'Cfa018454' => 'cfa', 'Cfa020585' => 'cfa', 'Ciclev10000424m.g' => 'ccl', 'Ciclev10003605m.g' => 'ccl', 'Ciclev10007828m.g' => 'ccl', 'Ciclev10014620m.g' => 'ccl', 'Ciclev10015169m.g' => 'ccl', 'Ciclev10018291m.g' => 'ccl', 'Ciclev10028256m.g' => 'ccl', 'Ciclev10033822m.g' => 'ccl', 'CiPaw.05G060300' => 'cil', 'CiPaw.05G085000' => 'cil', 'CiPaw.06G083700' => 'cil', 'CiPaw.06G120300' => 'cil', 'CiPaw.09G060500' => 'cil', 'CiPaw.09G123800' => 'cil', 'CiPaw.11G169700' => 'cil', 'CiPaw.12G118300' => 'cil', 'CiPaw.15G071000' => 'cil', 'CiPaw.15G081900' => 'cil', 'ClCG01G024610' => 'cla', 'ClCG03G006070' => 'cla', 'ClCG05G019250' => 'cla', 'ClCG09G009500' => 'cla', 'ClCG11G008200' => 'cla', 'ClCG11G018080' => 'cla', 'COL.COLO4_17373' => 'col', 'COL.COLO4_22994' => 'col', 'COL.COLO4_26389' => 'col', 'COL.COLO4_27170' => 'col', 'COL.COLO4_31074' => 'col', 'COL.COLO4_31465' => 'col', 'COL.COLO4_36438' => 'col', 'COL.COLO4_36439' => 'col', 'Cpa.g.c38781' => 'cpa', 'Cpa.g.sc128.12' => 'cpa', 'Cpa.g.sc166.7' => 'cpa', 'Cpa.g.sc166.8' => 'cpa', 'Cpa.g.sc20.111' => 'cpa', 'Cpa.g.sc27.31' => 'cpa', 'Cpa.g.sc64.36' => 'cpa', 'Cpa.g.sc64.37' => 'cpa', 'Cpa.g.sc66.49' => 'cpa', 'Cpa.g.sc80.64' => 'cpa', 'CsaV3_1G012320' => 'csa', 'CsaV3_2G008480' => 'csa', 'CsaV3_2G033450' => 'csa', 'CsaV3_3G044830' => 'csa', 'CsaV3_4G033710' => 'csa', 'CsaV3_6G051730' => 'csa', 'CsaV3_7G025350' => 'csa', 'CSS0001067' => 'camsi', 'CSS0005996' => 'camsi', 'CSS0006590' => 'camsi', 'CSS0009673' => 'camsi', 'CSS0010201' => 'camsi', 'CSS0010549' => 'camsi', 'CSS0011364' => 'camsi', 'CSS0014473' => 'camsi', 'CSS0014961' => 'camsi', 'CSS0020191' => 'camsi', 'CSS0021165' => 'camsi', 'CSS0022306' => 'camsi', 'CSS0030591' => 'camsi', 'CSS0030696' => 'camsi', 'CSS0032653' => 'camsi', 'CSS0037487' => 'camsi', 'CSS0041102' => 'camsi', 'CSS0041261' => 'camsi', 'CSS0046246' => 'camsi', 'CSS0049256' => 'camsi', 'DCAR_004075' => 'dca', 'DCAR_011538' => 'dca', 'DCAR_019553' => 'dca', 'DCAR_020952' => 'dca', 'DCAR_021739' => 'dca', 'DCAR_027407' => 'dca', 'DCAR_027913' => 'dca', 'DCAR_028066' => 'dca', 'Dinv05899' => 'din', 'Dinv07563' => 'din', 'Dinv08010' => 'din', 'Dinv14125' => 'din', 'Dinv20172' => 'din', 'Dinv30743' => 'din', 'Dinv31229' => 'din', 'Dinv34162' => 'din', 'Dinv36028' => 'din', 'Dinv39368' => 'din', 'Dinv40565' => 'din', 'Dinv41706' => 'din', 'Duzib052G0089' => 'dzi', 'Duzib116G0641' => 'dzi', 'Duzib132G0069' => 'dzi', 'Duzib132G1219' => 'dzi', 'Duzib147G0278' => 'dzi', 'Duzib160G0480' => 'dzi', 'Duzib170G0661' => 'dzi', 'Duzib177G0591' => 'dzi', 'Duzib187G1353' => 'dzi', 'Duzib192G0858' => 'dzi', 'Duzib192G0883' => 'dzi', 'Duzib213G0506' => 'dzi', 'Duzib235G0289' => 'dzi', 'Duzib251G0422' => 'dzi', 'ECA232G3898' => 'eca', 'ECA233G5950' => 'eca', 'ECA234G1699' => 'eca', 'ECA234G2421' => 'eca', 'ECA236G0426' => 'eca', 'ECA236G4331' => 'eca', 'ECA248G2573' => 'eca', 'EL10Ac1g00077' => 'bvu', 'EL10Ac1g01746' => 'bvu', 'EL10Ac2g03464' => 'bvu', 'EL10Ac4g08176' => 'bvu', 'EL10Ac7g17521' => 'bvu', 'EL10Ac8g20386' => 'bvu', 'EL10Ac9g21343' => 'bvu', 'EL10Ac9g22688' => 'bvu', 'Eucgr.B03434' => 'egr', 'Eucgr.D00618' => 'egr', 'Eucgr.E02395' => 'egr', 'Eucgr.F01129' => 'egr', 'Eucgr.F02622' => 'egr', 'Eucgr.F04207' => 'egr', 'FAN01G0570' => 'fan', 'FAN03G3351' => 'fan', 'FAN06G3702' => 'fan', 'FAN07G2149' => 'fan', 'FAN10G3758' => 'fan', 'FAN11G1170' => 'fan', 'FAN11G2050' => 'fan', 'FAN11G2724' => 'fan', 'FAN12G1700' => 'fan', 'FAN12G2028' => 'fan', 'FAN15G1160' => 'fan', 'FAN15G3063' => 'fan', 'FAN16G2540' => 'fan', 'FAN16G3077' => 'fan', 'FAN16G3624' => 'fan', 'FAN17G0221' => 'fan', 'FAN20G2492' => 'fan', 'FAN20G2905' => 'fan', 'FAN21G0548' => 'fan', 'FAN21G1300' => 'fan', 'FAN22G0077' => 'fan', 'FAN22G1315' => 'fan', 'FAN24G1280' => 'fan', 'FAN24G1445' => 'fan', 'FAN24G3527' => 'fan', 'FAN25G0464' => 'fan', 'FAN25G2885' => 'fan', 'FAN25G3270' => 'fan', 'FAN27G1101' => 'fan', 'FAN27G2846' => 'fan', 'FAN27G3524' => 'fan', 'FvH4_2g11770' => 'fve', 'FvH4_2g15630' => 'fve', 'FvH4_3g05570' => 'fve', 'FvH4_3g09110' => 'fve', 'FvH4_3g19940' => 'fve', 'FvH4_4g04821' => 'fve', 'FvH4_4g31480' => 'fve', 'FvH4_7g01740' => 'fve', 'Glyma.05G130400' => 'gma', 'Glyma.05G156400' => 'gma', 'Glyma.07G197000' => 'gma', 'Glyma.08G085151' => 'gma', 'Glyma.08G114500' => 'gma', 'Glyma.08G300400' => 'gma', 'Glyma.10G215800' => 'gma', 'Glyma.12G224400' => 'gma', 'Glyma.13G179300' => 'gma', 'Glyma.13G218151' => 'gma', 'Glyma.13G238800' => 'gma', 'Glyma.13G276900' => 'gma', 'Glyma.14G078200' => 'gma', 'Glyma.15G074500' => 'gma', 'Glyma.15G094100' => 'gma', 'Glyma.17G247200' => 'gma', 'Glyma.18G120100' => 'gma', 'Glyma.20G176000' => 'gma', 'Gohir.A01G063600' => 'ghi', 'Gohir.A01G170301' => 'ghi', 'Gohir.A02G060500' => 'ghi', 'Gohir.A05G133850' => 'ghi', 'Gohir.A05G161400' => 'ghi', 'Gohir.A06G012900' => 'ghi', 'Gohir.A06G035901' => 'ghi', 'Gohir.A06G127100' => 'ghi', 'Gohir.A06G210500' => 'ghi', 'Gohir.A08G008650' => 'ghi', 'Gohir.A09G072700' => 'ghi', 'Gohir.A09G088301' => 'ghi', 'Gohir.A10G040600' => 'ghi', 'Gohir.A12G036300' => 'ghi', 'Gohir.A12G143350' => 'ghi', 'Gohir.A12G165500' => 'ghi', 'Gohir.A13G145700' => 'ghi', 'Gohir.D01G050000' => 'ghi', 'Gohir.D01G051366' => 'ghi', 'Gohir.D01G161350' => 'ghi', 'Gohir.D02G065900' => 'ghi', 'Gohir.D05G164200' => 'ghi', 'Gohir.D05G355500' => 'ghi', 'Gohir.D06G010400' => 'ghi', 'Gohir.D06G111250' => 'ghi', 'Gohir.D06G132000' => 'ghi', 'Gohir.D06G210500' => 'ghi', 'Gohir.D07G165675' => 'ghi', 'Gohir.D08G062240' => 'ghi', 'Gohir.D08G086101' => 'ghi', 'Gohir.D08G138060' => 'ghi', 'Gohir.D09G072300' => 'ghi', 'Gohir.D10G041400' => 'ghi', 'Gohir.D11G191020' => 'ghi', 'Gohir.D11G212066' => 'ghi', 'Gohir.D12G036300' => 'ghi', 'Gohir.D12G168600' => 'ghi', 'Gohir.D13G150600' => 'ghi', 'Gorai.001G057300' => 'gra', 'Gorai.002G069900' => 'gra', 'Gorai.002G200000' => 'gra', 'Gorai.003G067600' => 'gra', 'Gorai.005G074800' => 'gra', 'Gorai.006G087300' => 'gra', 'Gorai.008G037500' => 'gra', 'Gorai.008G181400' => 'gra', 'Gorai.009G169400' => 'gra', 'Gorai.009G387900' => 'gra', 'Gorai.010G013300' => 'gra', 'Gorai.010G153800' => 'gra', 'Gorai.010G255800' => 'gra', 'Gorai.011G043700' => 'gra', 'Gorai.011G198900' => 'gra', 'Gorai.013G168400' => 'gra', 'GSVIVG01005212001' => 'vvi', 'GSVIVG01006163001' => 'vvi', 'GSVIVG01009625001' => 'vvi', 'GSVIVG01014338001' => 'vvi', 'GSVIVG01020005001' => 'vvi', 'GSVIVG01021450001' => 'vvi', 'GSVIVG01023975001' => 'vvi', 'GSVIVG01034490001' => 'vvi', 'HanXRQChr04g0112071' => 'han', 'HanXRQChr05g0131151' => 'han', 'HanXRQChr09g0262371' => 'han', 'HanXRQChr09g0268401' => 'han', 'HanXRQChr10g0279241' => 'han', 'HanXRQChr10g0297961' => 'han', 'HanXRQChr11g0326231' => 'han', 'HanXRQChr11g0328471' => 'han', 'HanXRQChr16g0507941' => 'han', 'HanXRQChr17g0560211' => 'han', 'Haze_02108' => 'cav', 'Haze_02428' => 'cav', 'Haze_05593' => 'cav', 'Haze_06448' => 'cav', 'Haze_09427' => 'cav', 'Haze_12022' => 'cav', 'Haze_17612' => 'cav', 'Haze_17928' => 'cav', 'Hma1.2p1_0032F.1_g019250' => 'hma', 'Hma1.2p1_0163F.1_g072690' => 'hma', 'Hma1.2p1_0265F.1_g106710' => 'hma', 'Hma1.2p1_0286F.1_g113970' => 'hma', 'Hma1.2p1_0363F.1_g136640' => 'hma', 'Hma1.2p1_0584F.1_g183470' => 'hma', 'Hma1.2p1_0885F.1_g232570' => 'hma', 'HPP92_006022' => 'vpl', 'HPP92_007320' => 'vpl', 'HPP92_011521' => 'vpl', 'HPP92_019387' => 'vpl', 'HPP92_024038' => 'vpl', 'Hund05891' => 'sun', 'Hund06450' => 'sun', 'Hund12053' => 'sun', 'Hund16800' => 'sun', 'Hund21222' => 'sun', 'Hund22896' => 'sun', 'Hund23746' => 'sun', 'Hund27083' => 'sun', 'Lalb_Chr02g0141831' => 'lal', 'Lalb_Chr02g0141841' => 'lal', 'Lalb_Chr05g0220411' => 'lal', 'Lalb_Chr06g0162081' => 'lal', 'Lalb_Chr09g0327651' => 'lal', 'Lalb_Chr13g0295051' => 'lal', 'Lalb_Chr15g0086801' => 'lal', 'Lalb_Chr16g0383781' => 'lal', 'Lalb_Chr16g0383791' => 'lal', 'Lalb_Chr18g0055441' => 'lal', 'Lalb_Chr18g0059611' => 'lal', 'Lalb_Chr20g0109661' => 'lal', 'Lalb_Chr20g0109831' => 'lal', 'Lalb_Chr20g0121871' => 'lal', 'Lalb_Chr22g0355361' => 'lal', 'Lalb_Chr25g0286371' => 'lal', 'Lj1A1187G43' => 'lonja', 'Lj1A1205T50' => 'lonja', 'Lj1A800G33' => 'lonja', 'Lj1C1187T7' => 'lonja', 'Lj1C843T11' => 'lonja', 'Lj1g0010940' => 'lja', 'Lj2A288T69' => 'lonja', 'Lj3g0024276' => 'lja', 'Lj4A47T76' => 'lonja', 'Lj4g0005805' => 'lja', 'Lj4g0006097' => 'lja', 'Lj4g0008528' => 'lja', 'Lj4g0024907' => 'lja', 'Lj5g0012472' => 'lja', 'Lj5g0018648' => 'lja', 'Lj6C789G1' => 'lonja', 'Lj6g0004000' => 'lja', 'Lj7A292G67' => 'lonja', 'Lj7A292T64' => 'lonja', 'Lj9A400T58' => 'lonja', 'Lsat_1_v5_gn_1_126181' => 'lsa', 'Lsat_1_v5_gn_4_123041' => 'lsa', 'Lsat_1_v5_gn_4_133620' => 'lsa', 'Lsat_1_v5_gn_4_53221' => 'lsa', 'Lsat_1_v5_gn_4_71961' => 'lsa', 'Lsat_1_v5_gn_7_105241' => 'lsa', 'Lsat_1_v5_gn_7_21361' => 'lsa', 'Lsat_1_v5_gn_7_28860' => 'lsa', 'Lsat_1_v5_gn_7_31260' => 'lsa', 'Lsat_1_v5_gn_8_52801' => 'lsa', 'Manes.02G191400' => 'mes', 'Manes.03G110100' => 'mes', 'Manes.04G071100' => 'mes', 'Manes.05G100500' => 'mes', 'Manes.05G164700' => 'mes', 'Manes.15G087000' => 'mes', 'Manes.15G121500' => 'mes', 'Manes.16G028300' => 'mes', 'Manes.17G046100' => 'mes', 'Manes.17G069800' => 'mes', 'Manes.18G100500' => 'mes', 'Mapoly0002s0109' => 'mpo', 'Mapoly0024s0007' => 'mpo', 'Mapoly0089s0032' => 'mpo', 'MBI04_g42241_MAGBIO' => 'mbi', 'MBI05_g11988_MAGBIO' => 'mbi', 'MBI05_g35452_MAGBIO' => 'mbi', 'MBI07_g30179_MAGBIO' => 'mbi', 'MBI07_g35859_MAGBIO' => 'mbi', 'MBI07_g35860_MAGBIO' => 'mbi', 'MBI07_g37166_MAGBIO' => 'mbi', 'MBI08_g18172_MAGBIO' => 'mbi', 'MBI09_g08441_MAGBIO' => 'mbi', 'MBI13_g01676_MAGBIO' => 'mbi', 'MBI14_g42955_MAGBIO' => 'mbi', 'MBI16_g13161_MAGBIO' => 'mbi', 'MBI17_g27204_MAGBIO' => 'mbi', 'MBI19_g21595_MAGBIO' => 'mbi', 'MD00G1148400' => 'mdo', 'MD02G1301200' => 'mdo', 'MD03G1227800' => 'mdo', 'MD05G1041100' => 'mdo', 'MD05G1124800' => 'mdo', 'MD05G1284000' => 'mdo', 'MD05G1338800' => 'mdo', 'MD05G1338900' => 'mdo', 'MD07G1022800' => 'mdo', 'MD10G1047500' => 'mdo', 'MD10G1127500' => 'mdo', 'MD10G1262300' => 'mdo', 'MD10G1293800' => 'mdo', 'MD16G1074300' => 'mdo', 'Medtr1g021670' => 'mtr', 'Medtr1g096320' => 'mtr', 'Medtr2g013690' => 'mtr', 'Medtr2g019450' => 'mtr', 'Medtr2g085170' => 'mtr', 'Medtr4g088785' => 'mtr', 'Medtr8g055930' => 'mtr', 'Medtr8g085850' => 'mtr', 'MELO3C002605.2' => 'cme', 'MELO3C003891.2' => 'cme', 'MELO3C004012.2' => 'cme', 'MELO3C007134.2' => 'cme', 'MELO3C008118.2' => 'cme', 'MELO3C016700.2' => 'cme', 'MELO3C024127.2' => 'cme', 'MELO3C033361.2' => 'cme', 'MELO3C033362.2' => 'cme', 'Migut.C00430' => 'egut', 'Migut.C01246' => 'egut', 'Migut.E00101' => 'egut', 'Migut.H01486' => 'egut', 'Migut.H01939' => 'egut', 'Migut.K00360' => 'egut', 'Migut.M00910' => 'egut', 'Migut.M01139' => 'egut', 'Migut.N02677' => 'egut', 'MSTRG.13252' => 'ama', 'MSTRG.14701' => 'ama', 'MSTRG.1521' => 'ama', 'MSTRG.15884' => 'ama', 'MSTRG.16242' => 'ama', 'MSTRG.22285' => 'ama', 'MSTRG.22444' => 'ama', 'MSTRG.2349' => 'ama', 'MSTRG.26308' => 'ama', 'MSTRG.28296' => 'ama', 'MSTRG.9895' => 'ama', 'Nitab4.5_0000110g0060' => 'nta', 'Nitab4.5_0000420g0130' => 'nta', 'Nitab4.5_0000422g0030' => 'nta', 'Nitab4.5_0000560g0180' => 'nta', 'Nitab4.5_0000703g0100' => 'nta', 'Nitab4.5_0000786g0200' => 'nta', 'Nitab4.5_0001336g0020' => 'nta', 'Nitab4.5_0001796g0030' => 'nta', 'Nitab4.5_0003348g0060' => 'nta', 'Nitab4.5_0003698g0040' => 'nta', 'Nitab4.5_0003942g0090' => 'nta', 'Nitab4.5_0004775g0070' => 'nta', 'Nitab4.5_0004864g0030' => 'nta', 'Nitab4.5_0005615g0020' => 'nta', 'Nitab4.5_0009288g0030' => 'nta', 'Nitab4.5_0009341g0010' => 'nta', 'Nitab4.5_0009535g0010' => 'nta', 'Nn1g03995' => 'nnu', 'Nn1g04100' => 'nnu', 'Nn1g06530' => 'nnu', 'Nn3g16404' => 'nnu', 'Nn3g17212' => 'nnu', 'Nn3g20776' => 'nnu', 'Nn3g21923' => 'nnu', 'Nn5g27737' => 'nnu', 'Nn5g29461' => 'nnu', 'Nn7g38355' => 'nnu', 'Nn8g39873' => 'nnu', 'Oeu000548.2' => 'oeu', 'Oeu004672.1' => 'oeu', 'Oeu015605.2' => 'oeu', 'Oeu016092.1' => 'oeu', 'Oeu017879.3' => 'oeu', 'Oeu024910.1' => 'oeu', 'Oeu028965.1' => 'oeu', 'Oeu031269.1' => 'oeu', 'Oeu031270.1' => 'oeu', 'Oeu032535.1' => 'oeu', 'Oeu034151.1' => 'oeu', 'Oeu034152.1' => 'oeu', 'Oeu034588.2' => 'oeu', 'Oeu050846.1' => 'oeu', 'Oeu050849.2' => 'oeu', 'Oeu051063.2' => 'oeu', 'Oeu052368.1' => 'oeu', 'Oeu052370.1' => 'oeu', 'Os01g0210400' => 'osa', 'Os01g0304300' => 'osa', 'Os01g0749100' => 'osa', 'Os02g0745800' => 'osa', 'Os03g0769050' => 'osa', 'Os05g0531500' => 'osa', 'Os06g0724300' => 'osa', 'Os11g0198100' => 'osa', 'Peaxi162Scf00069g01425' => 'pax', 'Peaxi162Scf00280g00811' => 'pax', 'Peaxi162Scf00310g00615' => 'pax', 'Peaxi162Scf00362g00542' => 'pax', 'Peaxi162Scf00461g00310' => 'pax', 'Peaxi162Scf00530g00118' => 'pax', 'Peaxi162Scf00541g00057' => 'pax', 'Peaxi162Scf00661g00017' => 'pax', 'Peaxi162Scf00926g00027' => 'pax', 'Peaxi162Scf01064g00263' => 'pax', 'Peaxi162Scf01211g00135' => 'pax', 'PGR004G2336' => 'pgr', 'PGR042G0327' => 'pgr', 'PGR042G1957' => 'pgr', 'PGR042G2003' => 'pgr', 'PGR042G3929' => 'pgr', 'PGR083G1137' => 'pgr', 'PGR083G1364' => 'pgr', 'PGSC0003DMG400003381' => 'stu', 'PGSC0003DMG400003417' => 'stu', 'PGSC0003DMG400008981' => 'stu', 'PGSC0003DMG400012417' => 'stu', 'PGSC0003DMG400012823' => 'stu', 'PGSC0003DMG400016885' => 'stu', 'PGSC0003DMG400022812' => 'stu', 'PGSC0003DMG400029726' => 'stu', 'PGSC0003DMG401009243' => 'stu', 'PGSC0003DMG401031505' => 'stu', 'PGSC0003DMG402031505' => 'stu', 'Phvul.001G017600' => 'pvu', 'Phvul.002G193500' => 'pvu', 'Phvul.002G228900' => 'pvu', 'Phvul.002G236800' => 'pvu', 'Phvul.003G049500' => 'pvu', 'Phvul.005G072000' => 'pvu', 'Phvul.006G164800' => 'pvu', 'Phvul.006G185100' => 'pvu', 'Phvul.007G090000' => 'pvu', 'Potri.001G399800' => 'ptr', 'Potri.002G149900' => 'ptr', 'Potri.004G044100' => 'ptr', 'Potri.004G177600' => 'ptr', 'Potri.009G138000' => 'ptr', 'Potri.010G094000' => 'ptr', 'Potri.011G053000' => 'ptr', 'Potri.011G119300' => 'ptr', 'Potri.013G113700' => 'ptr', 'Potri.018G107800' => 'ptr', 'Potri.019G084100' => 'ptr', 'Pp3c14_23720' => 'ppa', 'Pp3c16_6340' => 'ppa', 'Pp3c23_13420' => 'ppa', 'Pp3c24_2740' => 'ppa', 'Pp3c25_860' => 'ppa', 'Pp3c8_21750' => 'ppa', 'Prupe.1G273000' => 'ppe', 'Prupe.1G273700' => 'ppe', 'Prupe.1G274100' => 'ppe', 'Prupe.2G023300' => 'ppe', 'Prupe.4G048000' => 'ppe', 'Prupe.4G080400' => 'ppe', 'Prupe.4G181200' => 'ppe', 'Prupe.8G056900' => 'ppe', 'Prupe.8G168700' => 'ppe', 'Psat1g189080' => 'psa', 'Psat1g204760' => 'psa', 'Psat4g175560' => 'psa', 'Psat4g177720' => 'psa', 'Psat5g244240' => 'psa', 'Psat6g010720' => 'psa', 'Psat6g187200' => 'psa', 'Psat7g072040' => 'psa', 'PSO017G3501' => 'pso', 'PSO063G2148' => 'pso', 'PSO063G5608' => 'pso', 'PSO210G6392' => 'pso', 'PSO541G2319' => 'pso', 'PSO541G2836' => 'pso', 'PSO541G4012' => 'pso', 'PSO541G6253' => 'pso', 'PSO675G0580' => 'pso', 'PSO675G0856' => 'pso', 'PSO675G5635' => 'pso', 'PSO675G9157' => 'pso', 'PSO832G1660' => 'pso', 'PSO832G1969' => 'pso', 'QL02p007186' => 'qlo', 'QL02p033904' => 'qlo', 'QL03p064391' => 'qlo', 'QL05p040593' => 'qlo', 'QL05p058242' => 'qlo', 'QL08p021825' => 'qlo', 'QL11p004981' => 'qlo', 'RcHm_v2.0_Chr1g0318301' => 'rch', 'RcHm_v2.0_Chr4g0418501' => 'rch', 'RcHm_v2.0_Chr4g0439971' => 'rch', 'RcHm_v2.0_Chr5g0008541' => 'rch', 'RcHm_v2.0_Chr5g0014101' => 'rch', 'RcHm_v2.0_Chr5g0014131' => 'rch', 'RcHm_v2.0_Chr5g0033621' => 'rch', 'RcHm_v2.0_Chr6g0272041' => 'rch', 'RcHm_v2.0_Chr6g0278831' => 'rch', 'Rhsim02G0130400' => 'rsi', 'Rhsim02G0171100' => 'rsi', 'Rhsim05G0053000' => 'rsi', 'Rhsim05G0053100' => 'rsi', 'Rhsim06G0096500' => 'rsi', 'Rhsim06G0096600' => 'rsi', 'Rhsim06G0199100' => 'rsi', 'Rhsim12G0062300' => 'rsi', 'Rhsim12G0062800' => 'rsi', 'Sabra02G0118600' => 'sbr', 'Sabra04G0027300' => 'sbr', 'Sabra04G0119500' => 'sbr', 'Sabra08G0112500' => 'sbr', 'Sabra11G0036800' => 'sbr', 'Sabra11G0103800' => 'sbr', 'Sabra13G0096300' => 'sbr', 'Sabra16G0262300' => 'sbr', 'Sabra18G0091700' => 'sbr', 'Sabra19G0095400' => 'sbr', 'SalBow6G3080' => 'sbo', 'SalBow7G1157' => 'sbo', 'SalBow7G2123' => 'sbo', 'SalBow7G2285' => 'sbo', 'SalBow7G3537' => 'sbo', 'SalBow8G2947' => 'sbo', 'SalBow8G4463' => 'sbo', 'SalBow8G5466' => 'sbo', 'Sc01g0001750' => 'sci', 'Sc02g0006640' => 'sci', 'Sc02g0006670' => 'sci', 'Sc04g0008220' => 'sci', 'Sc05g0006190' => 'sci', 'Sc08g0002760' => 'sci', 'Sc17g0006170' => 'sci', 'Sc22g0002050' => 'sci', 'Sc23g0001190' => 'sci', 'Sc24g0000980' => 'sci', 'Sed0006245' => 'sed', 'Sed0007543' => 'sed', 'Sed0009411' => 'sed', 'Sed0010765' => 'sed', 'Sed0012944' => 'sed', 'Sed0014682' => 'sed', 'Sed0016174' => 'sed', 'Sed0016796' => 'sed', 'Sed0020317' => 'sed', 'Sed0021467' => 'sed', 'SEGI_01316' => 'sgi', 'SEGI_03374' => 'sgi', 'SEGI_16265' => 'sgi', 'SEGI_18569' => 'sgi', 'SEGI_20351' => 'sgi', 'SEGI_26395' => 'sgi', 'SEGI_29469' => 'sgi', 'SEGI_34771' => 'sgi', 'SEGI_36769' => 'sgi', 'SEGI_37139' => 'sgi', 'SGA_v2.0_scaffold100G29687' => 'sas', 'SGA_v2.0_scaffold118G32472' => 'sas', 'SGA_v2.0_scaffold14G07051' => 'sas', 'SGA_v2.0_scaffold183G39845' => 'sas', 'SGA_v2.0_scaffold1G00174' => 'sas', 'SGA_v2.0_scaffold22G09714' => 'sas', 'SGA_v2.0_scaffold333G48992' => 'sas', 'SGA_v2.0_scaffold46G17491' => 'sas', 'SGA_v2.0_scaffold49G18294' => 'sas', 'SGA_v2.0_scaffold63G21658' => 'sas', 'SHI01741' => 'shi', 'SHI05771' => 'shi', 'SHI18077' => 'shi', 'SHI20525' => 'shi', 'SHI20527' => 'shi', 'SHI20528' => 'shi', 'SMO172G0185' => 'smo', 'SMO198G0020' => 'smo', 'SMO351G0006' => 'smo', 'SMO356G0118' => 'smo', 'SMO358G0296' => 'smo', 'SMO367G0079' => 'smo', 'SMO367G1277' => 'smo', 'Solyc01g014220.3' => 'sly', 'Solyc01g111770.2' => 'sly', 'Solyc02g078180.3' => 'sly', 'Solyc03g006430.3' => 'sly', 'Solyc03g006456.1' => 'sly', 'Solyc03g079860.2' => 'sly', 'Solyc04g079770.3' => 'sly', 'Solyc05g007430.4' => 'sly', 'Solyc07g063150.3' => 'sly', 'Solyc08g016620.3' => 'sly', 'Solyc09g057590.3' => 'sly', 'Solyc09g057600.1' => 'sly', 'Solyc10g009050.3' => 'sly', 'Solyc11g017420.2' => 'sly', 'Sopen01g053810' => 'spe', 'Sopen02g023040' => 'spe', 'Sopen03g002440' => 'spe', 'Sopen04g033350' => 'spe', 'Sopen05g003310' => 'spe', 'Sopen07g004050' => 'spe', 'Sopen07g031340' => 'spe', 'Sopen08g006990' => 'spe', 'Sopen10g004830' => 'spe', 'Sopen11g009370' => 'spe', 'Sp1g24450' => 'spa', 'Sp1g29670' => 'spa', 'Sp1g39600' => 'spa', 'Sp2g11080' => 'spa', 'Sp2g13970' => 'spa', 'Sp4g16130' => 'spa', 'Sp6g13080' => 'spa', 'Sp7g37270' => 'spa', 'TAR371G0065' => 'tar', 'TAR376G0340' => 'tar', 'TAR376G0435' => 'tar', 'TAR381G0002' => 'tar', 'TAR381G1236' => 'tar', 'TAR624G0055' => 'tar', 'TAR624G0324' => 'tar', 'TAR624G0696' => 'tar', 'TAR624G0906' => 'tar', 'TAR625G0107' => 'tar', 'TAR626G0015' => 'tar', 'TAR626G1356' => 'tar', 'TAR627G0888' => 'tar', 'TAR628G0399' => 'tar', 'TAR628G1327' => 'tar', 'TAR629G2831' => 'tar', 'TAR629G2874' => 'tar', 'TAR633G1432' => 'tar', 'TAR633G2771' => 'tar', 'THA.LOC104803394' => 'tha', 'THA.LOC104805153' => 'tha', 'THA.LOC104806784' => 'tha', 'THA.LOC104810473' => 'tha', 'THA.LOC104813100' => 'tha', 'THA.LOC104814215' => 'tha', 'THA.LOC104815554' => 'tha', 'THA.LOC104820544' => 'tha', 'THA.LOC104824754' => 'tha', 'THA.LOC104827717' => 'tha', 'Thecc.02G031400' => 'tca', 'Thecc.02G055900' => 'tca', 'Thecc.02G350800' => 'tca', 'Thecc.06G150900' => 'tca', 'Thecc.06G186600' => 'tca', 'Thecc.07G089600' => 'tca', 'Thecc.08G020400' => 'tca', 'Thecc.08G182100' => 'tca', 'Thhalv10000873m.g' => 'esa', 'Thhalv10004185m.g' => 'esa', 'Thhalv10006981m.g' => 'esa', 'Thhalv10007204m.g' => 'esa', 'Thhalv10011374m.g' => 'esa', 'Thhalv10013482m.g' => 'esa', 'Thhalv10017801m.g' => 'esa', 'Thhalv10024983m.g' => 'esa', 'TPR.G12072' => 'tpr', 'TPR.G15769' => 'tpr', 'TPR.G16504' => 'tpr', 'TPR.G16506' => 'tpr', 'TPR.G24345' => 'tpr', 'TPR.G26666' => 'tpr', 'TPR.G27320' => 'tpr', 'TPR.G31819' => 'tpr', 'TPR.G38879' => 'tpr', 'TPR.G39015' => 'tpr', 'TPR.G8819' => 'tpr', 'TWI09G0924' => 'twi', 'TWI12G0811' => 'twi', 'TWI12G1294' => 'twi', 'TWI31G0150' => 'twi', 'TWI36G1262' => 'twi', 'TWI38G1287' => 'twi', 'TWI38G1633' => 'twi', 'TWI38G1982' => 'twi', 'TWI39G0116' => 'twi', 'TWI60G1011' => 'twi', 'TWI63G0171' => 'twi', 'TWI73G0839' => 'twi', 'TWI79G1511' => 'twi', 'unitig_0.g915' => 'ugi', 'unitig_0.g916' => 'ugi', 'unitig_21.g20219' => 'ugi', 'unitig_21.g20416' => 'ugi', 'unitig_578.g16132' => 'ugi', 'unitig_578.g16718' => 'ugi', 'unitig_62.g23481' => 'ugi', 'unitig_744.g24535' => 'ugi', 'unitig_749.g13525' => 'ugi', 'vmacro01248' => 'vma', 'vmacro02290' => 'vma', 'vmacro10946' => 'vma', 'vmacro11865' => 'vma', 'vmacro12493' => 'vma', 'vmacro17322' => 'vma', 'vmacro21599' => 'vma', 'vmacro23041' => 'vma', 'VMungo0251G0004' => 'vmu', 'VMungo0251G2639' => 'vmu', 'VMungo0251G2967' => 'vmu', 'VMungo0540G0864' => 'vmu', 'VMungo0540G1569' => 'vmu', 'VMungo0647G0317' => 'vmu', 'VMungo0720G1373' => 'vmu', 'VMungo0720G1508' => 'vmu', 'VMungo1080G0485' => 'vmu', 'VMungo1215G3177' => 'vmu', 'Zm00001eb112600' => 'zma', 'Zm00001eb120220' => 'zma', 'Zm00001eb153240' => 'zma', 'Zm00001eb168880' => 'zma', 'Zm00001eb213920' => 'zma', 'Zm00001eb228280' => 'zma', 'Zm00001eb254580' => 'zma', 'Zm00001eb272180' => 'zma', 'Zm00001eb293190' => 'zma', 'Zm00001eb322930' => 'zma', 'Zm00001eb353360' => 'zma', 'Zm00001eb353390' => 'zma', 'Zm00001eb353430' => 'zma', 'Zm00001eb353440' => 'zma', 'Zm00001eb353780' => 'zma' ) $gf_id = 'HOM05D000499' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000499' ) $data_identifier = 'HOM05D000499' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 29, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 12, 'amhyb' => (int) 8, 'aly' => (int) 12, 'aox' => (int) 9, 'arhy' => (int) 26, 'ath' => (int) 8, 'atr' => (int) 7, 'acertr' => (int) 10, 'cqu' => (int) 15, 'bca' => (int) 29, 'bol' => (int) 16, 'bra' => (int) 15, 'can' => (int) 11, 'cansat' => (int) 8, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 9, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 8, 'cpa' => (int) 10, 'csa' => (int) 7, 'camsi' => (int) 20, 'dca' => (int) 8, 'din' => (int) 12, 'dzi' => (int) 14, 'eca' => (int) 7, 'bvu' => (int) 8, 'egr' => (int) 6, 'fan' => (int) 31, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 38, 'gra' => (int) 16, 'vvi' => (int) 8, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 5, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 11, 'lja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 11, 'mpo' => (int) 3, 'mbi' => (int) 14, 'mdo' => (int) 14, 'mtr' => (int) 8, 'cme' => (int) 9, 'egut' => (int) 9, 'ama' => (int) 11, 'nta' => (int) 17, 'nnu' => (int) 11, 'oeu' => (int) 18, 'osa' => (int) 8, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 6, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 9, 'rsi' => (int) 9, 'sbr' => (int) 10, 'sbo' => (int) 8, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 10, 'sas' => (int) 10, 'shi' => (int) 6, 'smo' => (int) 7, 'sly' => (int) 14, 'spe' => (int) 10, 'spa' => (int) 8, 'tar' => (int) 19, 'tha' => (int) 10, 'tca' => (int) 8, 'esa' => (int) 8, 'tpr' => (int) 11, 'twi' => (int) 13, 'ugi' => (int) 9, 'vma' => (int) 8, 'vmu' => (int) 10, 'zma' => (int) 15 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb353780' $species_info = array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) $local_species = 'zma' $disabled = '' $selected = '' $num_hits = (int) 1